TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.667879 %AT, 1818696 nt, 10946 terms. Intergenic: 0.725214 %AT, H2T: 179674 nt, 1145 terms; T2T: 43319 nt, 633 terms; H2H: 59488 nt, 914 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|167626220|ref|NC_010331.1| Francisella philomiragia subsp. philomiragia ATCC 25017 plasmid pFPHI01, complete sequence (length 3936) Fphi_0002 1458 - 2378 + | hypothetical protein TERM 1 2498 - 2482 - g 70 -2.3 -5.37593 | overlap 2483 TTTGAAACTAAAAAA CTTTTGA GTT CCAAAAA GAAAATCTCAAATGA Fphi_0004 2365 - 2646 + | hypothetical protein TERM 2 2803 - 2830 + T 71 -8 -3.14931 | gap 1, overlap 2807 TTTTCTAAAGGCTCA TTATCCATTGAAA AAA TTTCAATGG-TAA TTCGTAGAAAATAGA TERM 3 2807 - 2827 + T 89 -11.3 -2.78018 | overlap 2803 CTAAAGGCTCATTAT CCATTGAAA AAA TTTCAATGG TAATTCGTAGAAAAT TERM 4 2884 - 2842 - T 100 -18 -4.4017 | opp_overlap 2843 2844, overlap 2844 GTAATTCGTAGAAAA TAGACACGCTATAAACTCAA ATT TTGAGTTTATAGCGTGCCCT TTTATCCCTGTCAAT TERM 5 2843 - 2883 + T 100 -17.1 -4.45083 | opp_overlap 2842 2844, overlap 2844 TAATTCGTAGAAAAT AGACACGCTATAAACTCAA ATT TTGAGTTTATAGCGTGCCC TTTTATCCCTGTCAA TERM 6 2882 - 2844 - T 100 -22.8 -3.80535 | opp_overlap 2843 2844, overlap 2842 AATTCGTAGAAAATA GACACGCTATAAACTCAA ATT TTGAGTTTATAGCGTGCC CTTTTATCCCTGTCA TERM 7 2844 - 2882 + T 100 -20.6 -3.26568 | opp_overlap 2844 2842, overlap 2843 AATTCGTAGAAAATA GACACGCTATAAACTCAA ATT TTGAGTTTATAGCGTGCC CTTTTATCCCTGTCA Fphi_0003 3415 - 3155 - | hypothetical protein SEQUENCE gi|167626225|ref|NC_010336.1| Francisella philomiragia subsp. philomiragia ATCC 25017, complete genome (length 2045775) Fphi_0005 1070 - 540 - | shikimate kinase I TERM 1 1155 - 1143 - R 72 -3.5 -5.36441 | overlap 1146 CTTGTACATAAAAAA TTATA GGC TATAA GATACCTAAATATTA Fphi_0006 2944 - 1196 - | type IV pili secretin component TERM 2 1566 - 1594 + g 87 -10.3 -3.7732 | opp_overlap 1570 ACTGCCTCTTGGAAT GCAACAGATGCTG CAC CAGAAGCTGTTGC TTGTTGGTATGGAAC Fphi_0007 3544 - 2954 - | type IV pili lipoprotein Fphi_0008 4149 - 3550 - | type IV pili glycosylation protein Fphi_0009 4706 - 4143 - | type IV pili associated protein TERM 3 4307 - 4292 - G 72 -4.8 -4.83169 | overlap 4267 4266 AGTTTTTCATAAAAA TTGAAA GTAA TTTCAA ATCTCTCACTTCACC Fphi_0010 5714 - 4710 - | type IV pili, pilus assembly protein Fphi_0011 5841 - 6491 + | nucleoside-triphosphate--adenylate kinase Fphi_0012 9220 - 6497 - | D-lactate dehydrogenase (cytochrome) Fphi_0013 9698 - 9282 - | hypothetical protein TERM 4 9646 - 9625 - G 74 -5.9 -4.56607 | GCACCAACCACAAAA CTTGTTAGA AATA TCAAACAAG AATAAACGATTGCTC Fphi_0014 10602 - 9709 - | GTP-binding protein Era Fphi_0015 11914 - 10724 - | aspartate aminotransferase Fphi_0016 12730 - 11924 - | hypothetical protein Fphi_0017 13373 - 12735 - | glycoprotease family protein TERM 5 13113 - 13101 - G 71 -6.3 -4.20074 | opp_overlap 13100 AAACATACTTGAAAA TCCTA TAA TAGGA ATATCTAAGCCAACA Fphi_0018 14510 - 13377 - | N-acetylglucosamine-6-phosphate deacetylase Fphi_0019 14573 - 15442 + | GTP-binding protein Fphi_0020 15511 - 17250 + | hypothetical protein Fphi_0021 17873 - 17280 - | thymidine kinase Fphi_0022 18520 - 17876 - | O-methyltransferase family protein TERM 6 18498 - 18509 + g 73 -4.4 -4.93877 | TGCCAAATACTATCT TCAG TAAA CTGA TTTTGTTTCATGACA TERM 7 18738 - 18725 - g 95 -3.9 -6.25741 | opp_overlap 18725 AAAGAACAAAAAAAA GTTTT TATA AAAAC TTTAGGTTGCCAAAT Fphi_0023 18707 - 20035 + | 2-alkenal reductase TERM 8 20229 - 20217 - g 75 -4.9 -4.89009 | opp_overlap 20217 ATACTCAATCAAAAA GATTT ATC AAATC ATGTTATGCTGAAAT TERM 9 20997 - 20983 - g 70 -7.2 -3.8374 | TCAAAAAATTGTAAA TGCTTA TGA TAAGCA TGAAGAGAACACTAA Fphi_0024 20039 - 21022 + | PhoH family protein, putative ATPase Fphi_0025 21015 - 21491 + | hypothetical protein Fphi_0026 21493 - 22335 + | HlyC/CorC family transporter-associated protein Fphi_0027 22335 - 23831 + | apolipoprotein N-acyltransferase Fphi_0028 23852 - 24352 + | hypothetical protein Fphi_0029 25153 - 24440 - | hypothetical protein Fphi_0031 25364 - 26233 + | Beta-lactamase Fphi_0030 27276 - 26224 - | DNA/RNA endonuclease G Fphi_0032 29149 - 27362 - | M24 family peptidase TERM 10 27562 - 27552 - G 74 -2.4 -5.4593 | TCAAAACAATAAAAA GGTC CAT GCCC TGTAGGAGAATCTTG TERM 11 27983 - 27993 + g 70 -4 -4.96468 | GCATAGAAGAGGTGC TTGA TCA TCAA TTTTCTTTAGATTTG Fphi_0033 29883 - 29176 - | hypothetical protein TERM 12 29493 - 29475 - G 70 -8.2 -3.20164 | opp_overlap 29474 29479, overlap 29479 CTAGATCTAAGCCAA CAAACTCT TTG AGAGTCTG CTCTAATATTCCTTG Fphi_0034 31103 - 29898 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 13 31564 - 31546 - g 77 -3.2 -5.55664 | TTATTAGCAAAAAAA CTAAATCT TAC AAATCTAG AGTTTTTTGAAACAG Fphi_0035 31201 - 31947 + | hypothetical protein Fphi_0036 32610 - 31957 - | N-acetyl-beta-hexosaminidase-like protein TERM 14 32092 - 32108 + g 90 -3.8 -5.88197 | TCCTAGCCTATACAC TAAACT ATTCC AGTTTA TTTTTTTATCTTTGA Fphi_0037 34397 - 32775 - | Beta-N-acetylhexosaminidase TERM 15 33065 - 33079 + g 77 -8.6 -3.67607 | opp_overlap 33064, overlap 33062 CTGTTGGGTAATTAG GCGATA TAA TATCGC TATCTTTTATTTTCT TERM 16 34121 - 34133 + g 74 -3.4 -5.2189 | opp_overlap 34121 CTTTTTTAACATAAC TCAG ATTTG CTGA TTTTTTAGTACTTAA Fphi_0038 35890 - 34514 - | 2-alkenal reductase TERM 17 35130 - 35145 + g 70 -4 -4.84359 | opp_overlap 35143 AATACTATAAGCATC GGCATT AAAT AATGTC TTTTTGTAAGACTCG TERM 18 35641 - 35623 - G 84 -6.8 -5.0809 | overlap 35639 AATAAATCATAAAAA CTGATATC GTA AATATCAG CCCAGATGCTGTGAT Fphi_0039 36975 - 35944 - | glutamine--fructose-6-phosphate transaminase (isomerizing) TERM 19 37662 - 37640 - g 71 -6.4 -4.13945 | opp_overlap 37639 ATTTTTACCTGAAAA TATTTTCCAT CAG ATGGATAATA ATAATGTAATGGCCG TERM 20 37763 - 37775 + G 70 -4.1 -4.77036 | TCCTTTCATCAGTTT TGTAG ATT CTGCA TTTTTCGTAATAAAG Fphi_0040 37173 - 38447 + | sodium-dicarboxylate symporter family protein Fphi_0041 39862 - 38471 - | hypothetical protein Fphi_0042 39972 - 40589 + | hypothetical protein Fphi_0043 40677 - 40847 + | rubredoxin Fphi_0044 40856 - 41728 + | hypothetical protein Fphi_0045 42323 - 41733 - | hypothetical protein Fphi_0047 42529 - 43473 + | integrase, catalytic region Fphi_0046 44336 - 43470 - | hypothetical protein TERM 21 44618 - 44607 - H 71 -4.4 -4.85599 | GTGATTTTATAAAAA TAGG TATC CCTA ATGATTGAAAATTTA Fphi_0048 44619 - 46436 + | GTP binding translational elongation factor Tu and G family protein Fphi_0049 46508 - 47320 + | short chain dehydrogenase/reductase family oxidoreductase Fphi_0050 49091 - 47346 - | gamma-glutamyltransferase TERM 22 47830 - 47816 - G 75 -8.6 -3.42702 | overlap 47814 CATTATTTAACAAGA TACCAG TTC CTGGTA CAACAATACCATTCC TERM 23 49062 - 49042 - G 70 -7 -3.89336 | overlap 49031 GCAACCAAAGCTAAA TTTGGTAA AAAAA TTACCAAA CACATTAAACTTACA Fphi_0051 50129 - 49212 - | VacJ like lipoprotein TERM 24 49372 - 49391 + g 85 -6.4 -5.27335 | GCTTTATCATTTTGA GATCCATC AAGT GAAGGATC TTTTTGTTTGAGAAC TERM 25 50094 - 50109 + g 89 -3.3 -5.95286 | TGCTATGATAGTGGC GAGTA ACAAAA TACTC TTTTTTATTTTTAAT Fphi_0052 51410 - 50208 - | lipoprotein Fphi_0053 51963 - 51403 - | transposase TERM 26 51566 - 51580 + g 70 -3.6 -4.90296 | overlap 51565 51568 AAATTATTTCTGATT TGTTTG GTA CAAATA TTTTTATAGGATTTT TERM 27 51624 - 51650 + g 100 -12.4 -4.41616 | overlap 51627 GGTTAGATTTTTTTG TAGTGACAGCAC ATT GTGCTGTCATTG TTTCTTTGGCAAGAT TERM 28 51627 - 51647 + g 100 -14.1 -4.32678 | overlap 51624 TAGATTTTTTTGTAG TGACAGCAC ATT GTGCTGTCA TTGTTTCTTTGGCAA TERM 29 51674 - 51696 + g 79 -10.6 -2.87146 | opp_overlap 51673, overlap 51671 51670 GCAAGATTATTAGAC TGGACAGAAC ACT GTTCTGTCCC TACGTTTATTTTATT Fphi_0054 52261 - 51956 - | hypothetical protein Fphi_0055 52692 - 52261 - | oligoketide cyclase/lipid transport protein TERM 30 52461 - 52439 - G 71 -7.8 -3.56568 | opp_overlap 52438 52439 CAATCACCTGTTAAA CTTTTGAATG GAC CATTCATAAG ATTTAAATGAATATG Fphi_0056 52767 - 53240 + | SsrA-binding protein Fphi_0057 53242 - 54012 + | hypothetical protein Fphi_0058 54433 - 55377 + | integrase, catalytic region Fphi_0059 55534 - 55382 - | hypothetical protein Fphi_0060 56205 - 55549 - | hypothetical protein TERM 31 55684 - 55670 - G 73 -4.3 -5.01535 | overlap 55675 GCATAATTACAAAAA TCAGA TTGTT TCTGA GCCCCACAAAAACCA Fphi_0061 57184 - 56240 - | integrase, catalytic region Fphi_0062 57916 - 57293 - | phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase Fphi_0063 58698 - 57925 - | imidazole glycerol phosphate synthase subunit HisF Fphi_0064 59417 - 58692 - | 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamideisomerase Fphi_0065 60014 - 59418 - | imidazole glycerol phosphate synthase subunit HisH Fphi_0066 61087 - 60011 - | imidazole glycerol-phosphate dehydratase/histidinol phosphatase Fphi_0067 62159 - 61074 - | histidinol-phosphate aminotransferase TERM 32 61722 - 61704 - G 77 -5.4 -5.01497 | AGGAGTACATAAAAA TAATAACT TAC AGTTATCA GGAATATTTGCTAAA Fphi_0068 63462 - 62164 - | histidinol dehydrogenase Fphi_0069 64473 - 63472 - | ATP phosphoribosyltransferase TERM 33 64626 - 64640 + r 85 -7.2 -4.88687 | ACTTCGTATAAGTTT TGAAGA TTT TCTTCA TTATTTTTTATTTCA Fphi_0070 66061 - 64790 - | metabolite:H+ symporter (MHS) family protein Fphi_0071 66093 - 67226 + | hypothetical protein TERM 34 68191 - 68204 + G 71 -5.3 -4.56597 | TGACTCTCACATCCG TAGAG CAAA CTCTA TTTTTGAGCAAGAAA Fphi_0073 67301 - 68374 + | hypothetical protein Fphi_0072 68574 - 68371 - | hypothetical protein Fphi_0074 69943 - 68558 - | exodeoxyribonuclease VII large subunit TERM 35 69511 - 69521 + g 70 -4 -4.9792 | AATCATCTGGCATAT TAAG AAC CTTA TTTTTCTCTAGAATG Fphi_0075 71273 - 70044 - | hypothetical protein Fphi_0076 71388 - 72563 + | hippurate hydrolase Fphi_0077 72560 - 73096 + | hypothetical protein Fphi_0078 74854 - 73103 - | transglutaminase-like superfamily protein Fphi_0079 75860 - 74877 - | hypothetical protein Fphi_0080 77312 - 75864 - | hypothetical protein TERM 36 77293 - 77255 - G 72 -2.5 -5.31275 | overlap 77267 CTTCATCAGAAAAAA TTTCATCATATACTCCT GAGTA AGGAGCATAACCTGAAA AAATGCTATCATTAG Fphi_0081 78710 - 77493 - | hypothetical protein Fphi_0082 79937 - 78747 - | hypothetical protein Fphi_0083 81281 - 80040 - | major facilitator transporter Fphi_0084 82571 - 81294 - | metabolite:H+ symporter (MHS) family protein TERM 37 82202 - 82177 - G 75 -8.3 -3.88971 | overlap 82174 82201 TACACAATAACATAA GCTCCAGGTAG CTCA CCACCTAAAGC AATACCTTGCATAAT Fphi_0085 82743 - 83687 + | integrase, catalytic region Fphi_0086 84463 - 83708 - | UBA/ThiF-type NAD/FAD binding fold TERM 38 84357 - 84370 + g 80 -2.5 -5.76949 | CCTATAAGCAACACT TTAAA CTTT TTTAA TTTTTTTTGAGCATC Fphi_0087 85921 - 84464 - | thiamine-phosphate pyrophosphorylase/thiamine-phosphate pyrophosphorylase Fphi_0088 86712 - 85933 - | ThiG protein thiamine biosynthesis TERM 39 86520 - 86530 + g 73 -4 -5.1101 | opp_overlap 86520 TATTCGGTAAAAACT TACA CCC TGTA TTTTTTAACTCCTCC Fphi_1923 86916 - 86716 - | hypothetical protein Fphi_0089 87971 - 86919 - | thiamine biosynthesis protein ThiO TERM 40 87115 - 87103 - G 75 -4.8 -5.00616 | CTTGCTTCTAAAAAA CGCT TATCT AGCG TAACTAACATACTTA Fphi_0090 89742 - 87964 - | thiamin biosynthesis protein TERM 41 88325 - 88347 + g 78 -10.6 -2.6891 | opp_overlap 88325 88329, overlap 88330 GCCGTACCATACCAA GCAATTTGGG CAG CCCCAATTGC TGATGTAATATGATC TERM 42 88347 - 88325 - G 83 -10.6 -3.29471 | opp_overlap 88325 88330, overlap 88329 GCCGTACCATACCAA GCAATTTGGG CAG CCCCAATTGC TGATGTAATATGATC Fphi_0091 90792 - 89995 - | glutamate racemase Fphi_0092 91589 - 90792 - | membrane protein of unknown function Fphi_0093 93629 - 91623 - | excinuclease ABC subunit B Fphi_0094 95078 - 93630 - | exodeoxyribonuclease I Fphi_0095 95950 - 95228 - | oxidoreductase, short-chain dehydrogenase family protein Fphi_0096 96066 - 96974 + | LysR family transcriptional regulator Fphi_0097 97869 - 96976 - | hypothetical protein Fphi_0098 98935 - 97856 - | hypothetical protein TERM 43 99308 - 99295 - g 71 -6.7 -4.15565 | opp_overlap 99287 99295 GGTATCATGGCAAAA GCCAT TGAT ATGGC TGGTATACAGTTTAG TERM 44 99866 - 99831 - g 70 -7.2 -3.80189 | gap 1 ATACACCAACTCAAA GACTCAT-GAGATTATT ACA AATAATCTCGATAAATC GGCAATGTATAGTGG Fphi_0099 99079 - 100962 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Fphi_0100 100975 - 101364 + | lipoprotein Fphi_0101 101384 - 102754 + | hypothetical protein TERM 45 102820 - 102798 - g 82 -4.1 -5.48825 | overlap 102799 102800 GATGAGTTAAAAAAA GCTGCAGCT ATAGA AGCTGCAAA ACATATTAAATCAGA TERM 46 102819 - 102799 - g 73 -7.6 -3.8821 | overlap 102798 102800 ATGAGTTAAAAAAAG CTGCAGCT ATAGA AGCTGCAA AACATATTAAATCAG Fphi_0102 102756 - 103430 + | ribose-5-phosphate isomerase A Fphi_0103 104302 - 103439 - | pirin-related protein Fphi_0104 105378 - 104341 - | threonine aldolase TERM 47 105513 - 105496 - H 74 -2.7 -5.65496 | GAGTAAAAATAAAAA TTCTATG CTAA CTTAGAA AAGTTGATATACCAG Fphi_0105 105567 - 106370 + | hypothetical protein Fphi_0106 107020 - 106388 - | hypothetical protein TERM 48 106792 - 106770 - G 80 -4.9 -5.37865 | gap 1 TTAATAATCAAAAAA GCCAACATCG CTCC CAATGT-GGC TGAGAATAAACAAAT TERM 49 107148 - 107132 - R 82 -9.5 -3.41002 | opp_overlap 107132 AGAATATTCAATTAA GCTAAAG CAG CTTTAGC TTTTTCAACTACTGC TERM 50 107132 - 107148 + r 100 -9.5 -4.63527 | opp_overlap 107132 AGAATATTCAATTAA GCTAAAG CAG CTTTAGC TTTTTCAACTACTGC Fphi_0107 107484 - 107128 - | 50S ribosomal protein L20 Fphi_0108 107717 - 107520 - | 50S ribosomal protein L35 Fphi_0109 108229 - 107762 - | translation initiation factor IF-3 TERM 51 107985 - 108038 + g 89 -3.1 -5.87688 | overlap 107991 107992 TTTACCTGGTAATCC CCTACATCAGTCACAGGTCTAAG TTTAATCT CTTTGATCTGTGTCTGCTTTTGG TTTTTTTTCGCTTGT TERM 52 107991 - 108032 + g 70 -3.7 -4.99665 | overlap 107985 107992 TGGTAATCCCCTACA TCAGTCACAGGTCTAAG TTTAATCT CTTTGATCTGTGTCTGC TTTTGGTTTTTTTTC Fphi_0110 110215 - 108308 - | threonyl-tRNA synthetase TERM 53 110603 - 110624 + H 79 -6.7 -4.63932 | opp_overlap 110613 ATAGGATTGTAATTG CAGGTATTA ATTT TAATATCTG TTTTATTAAAAAATA TERM 54 110818 - 110784 - g 73 -3.7 -5.0666 | GAGGGAAAAAATAAA GATTGTGGCTC CAGAGCTCAATAT GAACCACAATC GATAGAACAAGTTGA Fphi_0111 110658 - 112445 + | chitin-binding protein Fphi_0112 112953 - 112657 - | hypothetical protein TERM 55 112949 - 112929 - G 74 -6.3 -4.37595 | overlap 112930 AAAGAAACAAAAATA CGAATAAAA AGT TTTTATTCA ACATGACTCCTATAA Fphi_0113 113323 - 112943 - | glycine cleavage system protein H Fphi_0114 113429 - 114544 + | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase TERM 56 114630 - 114618 - g 83 -4.8 -5.46129 | GAACAAATGAAAAAA GCTC AACAA GAGC GTGAAAATATGGAAG Fphi_0115 114555 - 114890 + | hypothetical protein TERM 57 114963 - 114947 - g 73 -8.1 -3.53761 | GAATCTTTGCGTAAA TTACCAA CTA TTGGTAA AAAATCGTCTCAAAG Fphi_0116 114890 - 115495 + | recombination protein RecR TERM 58 115658 - 115705 + F 75 -9.7 -2.77029 | gap 1, opp_overlap 115658, overlap 115657 ATAAAACCACAGACA GCT-ATTATTTTCATAGATTAA GATTA TTAATTTATGAAAATAGTGAGC ATTTAGAAATGTTTA Fphi_0117 116287 - 118065 + | type IV pili ATPase TERM 59 118286 - 118272 - g 74 -5.8 -4.63932 | opp_overlap 118272 TATTCCCTAAGAAAA TATCTT ACA AAGATA TTACTGAAATGACTC TERM 60 119075 - 119085 + G 71 -5.4 -4.46212 | opp_overlap 119075 119073 GCTATTGTTGAAACA GGAA ATT TTCC TTTTCTGGTAGAACA Fphi_0118 118076 - 119308 + | type IV pili polytopic inner membrane protein Fphi_0119 119722 - 120666 + | integrase, catalytic region TERM 61 121052 - 121025 - T 74 -2 -5.60993 | overlap 121029 TTTGTTATAAAAAAA TTAAGCTTCTTC TTTT AAAGGAGCTGAA ACACTAGCTTGTACG Fphi_0120 122197 - 121025 - | outer membrane associated protein Fphi_0121 122542 - 122297 - | 4Fe-4S ferredoxin Fphi_0122 123032 - 122544 - | pantetheine-phosphate adenylyltransferase Fphi_0123 123591 - 123040 - | hypothetical protein Fphi_0124 123956 - 123603 - | hypothetical protein Fphi_0125 125207 - 123984 - | SufS subfamily cysteine desulfurase TERM 62 125245 - 125263 + r 78 -7.6 -4.431 | opp_overlap 125245 TATAACTCGAATAAA TTATACTA AAT TAGTATAA TTTTGTCAGTAAATG TERM 63 125263 - 125245 - R 77 -7.6 -4.21989 | opp_overlap 125245 TATAACTCGAATAAA TTATACTA AAT TAGTATAA TTTTGTCAGTAAATG Fphi_0126 126688 - 125315 - | L-serine ammonia-lyase Fphi_0127 127409 - 126741 - | hypothetical protein Fphi_0128 128990 - 127413 - | 2', 3'-cyclic nucleotide 2'-phosphodiesterase TERM 64 128539 - 128523 - G 80 -9.5 -3.64703 | opp_overlap 128497 TGTTTCGTAGCCAAA TGGCTTA ATA TAAGCCA AAGAATCCTGACTTG Fphi_0129 129832 - 128990 - | prephenate dehydratase TERM 65 129559 - 129573 + g 80 -7.2 -4.60889 | overlap 129557 CCCCTTCTAATCCCA TTAAGC AAT GCTTAA TTTTTAACACTACTT Fphi_0130 131511 - 129901 - | amino acid-polyamine-organocation (APC) superfamily protein Fphi_0131 132688 - 131591 - | alanine racemase Fphi_0132 134194 - 132701 - | alkaline phosphatase TERM 66 132991 - 132967 - G 82 -10.1 -3.63515 | overlap 132988 CCTTAGTGGGAACAA GTTGGGTTATC AAA GATAAACCAAC AGCTGTTGCCATAAT Fphi_0133 135026 - 134316 - | hypothetical protein Fphi_0134 135433 - 135023 - | hypothetical protein Fphi_0136 135443 - 136537 + | hypothetical protein Fphi_0135 137173 - 136523 - | HAD-superfamily hydrolase Fphi_0137 137986 - 137180 - | lignostilbene-alpha beta-dioxygenase-like protein Fphi_0139 138103 - 139047 + | integrase, catalytic region Fphi_0138 139453 - 139019 - | hypothetical protein Fphi_0140 139671 - 140615 + | integrase, catalytic region TERM 67 140891 - 140861 - g 83 -7 -4.77986 | CTAAAGATGCAAAAA TCTTCAAAAAAACC TTT GGTTTCTATAAAGA ACCTTTCAAAACAGT TERM 68 141286 - 141266 - g 73 -4 -5.07652 | gap 1, overlap 141267 141269 CTTGCTAAAAGAAAA CCACACCAA TTAT CTGGTG-GG CAGCGTCAGCGTGTA Fphi_0141 140852 - 141973 + | ATP-binding cassette putrescine uptake system, ATP-binding protein Fphi_0142 141973 - 142854 + | ATP-binding cassette putrescine uptake system, membrane protein, subunit H Fphi_0143 142867 - 143670 + | ornithine carbamoyltransferase Fphi_0144 144272 - 143676 - | putative threonine efflux protein TERM 69 144105 - 144087 - G 79 -8.2 -3.93695 | TGGATGATTTATAAA GATTGACT CTA AGCCAATC CCTATGATTAAAACC Fphi_0145 144655 - 144401 - | 50S ribosomal protein L27 Fphi_0146 145000 - 144686 - | 50S ribosomal protein L21 Fphi_0147 145789 - 145220 - | DNA-3-methyladenine glycosylase I Fphi_0148 145970 - 146515 + | hypothetical protein Fphi_0149 149409 - 146686 - | preprotein translocase subunit SecA TERM 70 146739 - 146753 + g 80 -2.8 -5.61881 | TACCCGAACCGCAAG GACATG GAT CATTTC TTTTTATTTTTGGAC TERM 71 149342 - 149352 + g 73 -4 -5.17353 | TTAATTTTTTGGACC GTTT TAG AAAC TTTTTTGATGAATCT Fphi_0150 149542 - 150591 + | hypothetical protein Fphi_0151 150598 - 151038 + | hypothetical protein Fphi_0152 151766 - 151044 - | purine-nucleoside phosphorylase Fphi_0153 153919 - 151970 - | microtubule-severing ATPase TERM 72 152772 - 152788 + g 72 -8 -3.51976 | TCTTTAGACTCTCTT GCAGCA AATAG TGCTGC TTCGTTTACAAGGTT TERM 73 154144 - 154160 + G 77 -5.2 -4.91511 | AAATAAAATAATAGC CTATAC AATTG GTATAG TTTTTCTCATAGAGT TERM 74 154433 - 154467 + G 81 -9.3 -3.74158 | opp_overlap 154436, overlap 154434 154436 TTTAGAGCCTTTCAA GGAGCATTTGGAGCA TTTAC TGCTCCAGTTGCTCG TTTGGCTATGGTTAG TERM 75 154434 - 154466 + G 86 -12.8 -2.84013 | opp_overlap 154436, overlap 154433 154436 TTAGAGCCTTTCAAG GAGCATTTGGAGCA TTTAC TGCTCCAGTTGCTC GTTTGGCTATGGTTA TERM 76 154436 - 154464 + G 77 -9.6 -2.9621 | opp_overlap 154436, overlap 154434 154433 AGAGCCTTTCAAGGA GCATTTGGAGCA TTTAC TGCTCCAGTTGC TCGTTTGGCTATGGT Fphi_0154 154121 - 155512 + | major facilitator superfamily transporter Fphi_0155 158335 - 155513 - | excinuclease ABC, subunit A Fphi_0156 158855 - 158373 - | GreA/GreB family elongation factor Fphi_0157 159476 - 158892 - | type IV pili, pilus assembly protein Fphi_0158 161098 - 159476 - | glucose-6-phosphate isomerase TERM 77 160874 - 160893 + g 89 -7.9 -5.27023 | AGAGTTAATTTTTTC TCCAGCA AACATC TGCTGGA TTTTATTTTTAAGAT Fphi_0159 161738 - 161085 - | thiamine pyrophosphokinase TERM 78 161485 - 161516 + g 73 -9 -3.30741 | opp_overlap 161471 161485 161480 161487, overlap 161471 CCTAGAGATATTATA TATTCTAGTGATTT TTCA AAATCAGTAGAATA TTGATCCTTATCAAT Fphi_0160 163260 - 161800 - | malate dehydrogenase Fphi_0161 164803 - 163364 - | leucyl aminopeptidase TERM 79 165760 - 165772 + G 76 -7.7 -3.93658 | AGATGATGGTACAGT CTCTC GCG GAGAG TTCTTTGGGCGTATT Fphi_0162 164969 - 166051 + | membrane protein of unknown function TERM 80 166386 - 166400 + G 72 -5 -4.76041 | TTGGTATCATAGGCT CTATAG TTA CTATGG TTTTTGGTGGGTATA Fphi_0163 166052 - 167110 + | membrane protein of unknown function Fphi_0164 167120 - 168373 + | M16 family metallopeptidase TERM 81 169443 - 169431 - g 83 -6.3 -5.01732 | AAGCTGTGTAAAAAA TAGCT CTA AGCTA AATATGCTATCTTCA Fphi_0165 168379 - 169602 + | M16 family metallopeptidase Fphi_0166 169603 - 170181 + | N6-adenine-specific methylase Fphi_0167 170214 - 170864 + | hypothetical protein Fphi_0168 171531 - 170923 - | tRNA-(ms(2)io(6)a)-hydroxylase Fphi_0169 171644 - 172447 + | uridine phosphorylase Fphi_0170 172464 - 172865 + | cytidine deaminase Fphi_0171 176207 - 173175 - | D-lactate dehydrogenase (cytochrome) TERM 82 176926 - 176916 - g 86 -5.4 -5.63103 | GCTCAATCAAAAAAA CAGA TGA TCTG CTACAAAAACTTAAT TERM 83 177027 - 177017 - g 74 -5.4 -4.65838 | opp_overlap 177017 GATAGAGTTGAAAAA GCAT ACA ATGC TATAGTAAATGCTGA TERM 84 177857 - 177839 - g 79 -4.5 -5.24129 | GTTGGGCATAAAAAA GCTCAAG TAGCT CTAGAGC ATGGTAAGTTATCCG Fphi_0172 176420 - 177958 + | phosphoglyceromutase Fphi_0173 177973 - 179253 + | seryl-tRNA synthetase TERM 85 179863 - 179874 + G 75 -7.2 -4.2558 | TGAAGATAAATTTGA GGGC TGTT GCCC TTTTCATGGCACATG Fphi_0174 179354 - 180250 + | ROK family protein Fphi_0175 180336 - 181595 + | multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) transporter Fphi_0176 181801 - 181598 - | hypothetical protein Fphi_0177 182225 - 181821 - | hypothetical protein Fphi_0178 182505 - 182272 - | hypothetical protein TERM 86 183603 - 183615 + G 72 -2.7 -5.30686 | ATTATTTATTCTACT TTTAG CTC CTGAA TTTTTTATGCCTCTT Fphi_0179 182698 - 184479 + | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 87 185947 - 185931 - g 71 -3 -5.06414 | gap 1, opp_overlap 185931 GGCGGTCAACAAAAA CGC-CTA GCTT TAGCGCG TGCATTCTTACAAGA Fphi_0180 184476 - 186125 + | cysteine/glutathione ABC transporter membrane/ATP-binding component Fphi_0182 186380 - 187324 + | integrase, catalytic region TERM 88 188488 - 188506 + F 71 -4.6 -4.90477 | TCTTCACAATCATCT TGATTACG AGT CATAATCA TTTTGATTTTTTCTA TERM 89 190476 - 190448 - f 84 -3.3 -5.82281 | opp_overlap 190453, overlap 190453 AAATATAGAAAAAAA TAAAATTCTTTCT TGA AAAAAGAACTTTT TGACACCACTTTAAT TERM 90 190471 - 190453 - f 88 -5.4 -5.61277 | opp_overlap 190453, overlap 190448 TAGAAAAAAATAAAA TTCTTTCT TGA AAAAAGAA CTTTTTGACACCACT Fphi_0184 190613 - 190840 + | hypothetical protein Fphi_0186 190855 - 191364 + | hypothetical protein TERM 91 192274 - 192261 - T 70 -8.1 -3.14126 | opp_overlap 192258 192261 TTATAAAGTTCAATA GCAGC TAAT GCTGC TGATTTAGATTTTTC TERM 92 192261 - 192274 + T 70 -8.1 -3.03811 | opp_overlap 192261, overlap 192258 TTATAAAGTTCAATA GCAGC TAAT GCTGC TGATTTAGATTTTTC Fphi_1922 192567 - 192322 - | hypothetical protein Fphi_0189 192687 - 193631 + | integrase, catalytic region Fphi_0188 194574 - 193603 - | hypothetical protein Fphi_0190 196229 - 194634 - | type I restriction-modification system methyltransferase subunit like protein Fphi_0191 197573 - 196323 - | C4-dicarboxylate transport protein Fphi_0192 197714 - 198238 + | putative ribosomal protein L11 Fphi_0193 198641 - 198261 - | endoribonuclease L-PSP, putative Fphi_0194 200185 - 198641 - | sulfate permease family protein TERM 93 199491 - 199478 - G 82 -5.3 -5.36965 | TAATACTATAAAAAA TGACT GCAT AGTCA GATGAATATTAGGCA Fphi_0195 201262 - 200282 - | ABC -2 type transporter Fphi_0196 202237 - 201293 - | integrase, catalytic region Fphi_0197 203376 - 202444 - | ABC transporter, ATP-binding protein TERM 94 203293 - 203265 - G 72 -6.1 -4.3179 | CCAAAAAACCATAAA TATCCCCTTGC TTAACTT GCAAAGAGATA TTATCAACTACCGTT Fphi_0198 204344 - 203373 - | hypothetical protein TERM 95 204324 - 204306 - G 74 -5.4 -4.80417 | opp_overlap 204306 GACAAAAATAACAAA TATAATCG ATA CAATTATA ATTTTTTTTCTAATC TERM 96 204375 - 204364 - H 76 -4.4 -5.23644 | opp_overlap 204364 AATCAAAGATAAAAA TCAC TACG GTGA TTATAAAGTAAACAA TERM 97 205198 - 205187 - g 70 -4.4 -4.77438 | opp_overlap 205187 ACGGATTATCAAAAA TGGA CAGC TCCA CTTGATCCTAAAGAC Fphi_0199 204488 - 205516 + | glycerophosphoryl diester phosphodiesterase TERM 98 206380 - 206393 + G 79 -5.3 -5.14682 | overlap 206378 206387 TGGGTTTGGCTAATT GCATT TGCA AATGC TTTTGTTTATTGTGC Fphi_0200 205621 - 206928 + | glycerol-3-phosphate transporter Fphi_0201 206912 - 207067 + | hypothetical protein Fphi_0202 207145 - 207684 + | short chain dehydrogenase/reductase family oxidoreductase Fphi_0203 207889 - 210108 + | peroxidase/catalase TERM 99 210285 - 210271 - g 72 -2.8 -5.24989 | opp_overlap 210271 TGATATATCAAAAAA GGATAA CTT TTCTCC TTTCAGACGGGATTA TERM 100 211103 - 211093 - g 72 -2.6 -5.27399 | opp_overlap 211097, overlap 211096 CAAGATATCAAAAAA TATT GCT AATA ATAGCTTATTACGCA Fphi_0205 210209 - 211531 + | dGTP triphosphohydrolase Fphi_0204 212735 - 211515 - | metabolite:H+ symporter (MHS) family protein TERM 101 211652 - 211639 - G 73 -8.1 -3.5944 | AGCGATATTGTCAAA GCAGG TATG CCTGC AGAAAATATTAGATA Fphi_0206 213147 - 212803 - | hypothetical protein Fphi_0207 214446 - 213148 - | MATE efflux family protein TERM 102 214520 - 214495 - H 75 -5.7 -4.69664 | gap 1, opp_overlap 214495 214493 TATAGCATTTAAAAA TGTATAAC-AAT TCC ATTAGTTATACA TATTTTAGCTATTAG TERM 103 214649 - 214665 + H 73 -8.1 -3.44891 | opp_overlap 214649 214646 214644 TCATAATAAACATCA GGAAAAA TAT TTTTTCC TTGATTAGCTTTATT TERM 104 214665 - 214649 - H 70 -8.1 -2.96748 | opp_overlap 214649, overlap 214646 214644 TCATAATAAACATCA GGAAAAA TAT TTTTTCC TTGATTAGCTTTATT TERM 105 216024 - 216010 - g 71 -8.6 -3.05268 | GAAGTACTTGGAATA TTGCAG TAG CTGCAA TCGCTGGATTTAAAC TERM 106 216108 - 216088 - g 73 -7.7 -3.79138 | AAGATACTCAGCAAA TCTCACTAA AAA TTAGTGAAA ATAGCTCATCAAGAG Fphi_0208 214752 - 217160 + | hypothetical protein Fphi_0209 217424 - 219781 + | glycosy hydrolase family protein Fphi_0210 220818 - 219874 - | integrase, catalytic region Fphi_0213 224352 - 223516 - | formyltetrahydrofolate deformylase Fphi_0214 225063 - 224434 - | uracil phosphoribosyltransferase TERM 107 225182 - 225159 - R 70 -5.2 -4.52502 | CTTAAAAATAAATAA CCTCCTTGCT GAAT AGTCAGGAGG CATATTGAATAGGAC Fphi_0215 227911 - 225233 - | glycosyl hydrolase family chitinase Fphi_0216 228399 - 229592 + | 2-amino-3-ketobutyrate coenzyme A ligase Fphi_0217 229610 - 230665 + | L-threonine 3-dehydrogenase TERM 108 231828 - 231866 + G 76 -4.1 -5.02323 | gap 1, opp_overlap 231828 231841, overlap 231841 TAATCTACAAAAACA TACAATACAAAAACTACA GACG TGTAGTACTTG-ATTGTA TTTTATTTATAATGG TERM 109 231854 - 231841 - g 79 -5.3 -5.1764 | opp_overlap 231828 231841, overlap 231828 CATACAATACAAAAA CTACA GACG TGTAG TACTTGATTGTATTT Fphi_0218 230666 - 231928 + | serine permease Fphi_0219 232625 - 231933 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Fphi_0220 232905 - 232615 - | cell division protein, septum formation initiator Fphi_0221 234280 - 232913 - | phosphopyruvate hydratase Fphi_0222 235623 - 234382 - | major facilitator transporter Fphi_0223 236468 - 235677 - | nicotinamide mononucleotide transporter Fphi_0224 237437 - 236490 - | ROK family protein Fphi_0225 238402 - 237437 - | ROK family protein TERM 110 237723 - 237733 + g 71 -3.2 -5.07567 | GCCACAGAATCTTTA GCAT CTA GTGC TTTTTTCAAATGTGA Fphi_0226 239754 - 238405 - | 23S rRNA 5-methyluridine methyltransferase Fphi_0227 240385 - 239822 - | hypothetical protein TERM 111 240218 - 240245 + g 74 -9.4 -3.01924 | gap 1, opp_overlap 240218 240217, overlap 240226 ATCTACACTTAAAAC TGCACAAATATGA TCT TCATATT-GTGCA TATTCAAAAGCCATA TERM 112 240245 - 240218 - G 74 -9.4 -3.1404 | gap 1, opp_overlap 240218 240226, overlap 240217 ATCTACACTTAAAAC TGCACAAATATGA TCT TCATATT-GTGCA TATTCAAAAGCCATA TERM 113 240496 - 240467 - R 100 -15.3 -2.97188 | opp_overlap 240475, overlap 240475 TTATATTATTAGATA TAAAAAAAGCGAC TAGT GTCGCTTTTTTTA TCGTGGTGGGTGCTG TERM 114 240488 - 240475 - R 100 -8.1 -5.76633 | opp_overlap 240475, overlap 240467 TTAGATATAAAAAAA GCGAC TAGT GTCGC TTTTTTTATCGTGGT TERM 115 240475 - 240488 + r 100 -8.1 -5.67967 | opp_overlap 240475 240467 TTAGATATAAAAAAA GCGAC TAGT GTCGC TTTTTTTATCGTGGT TERM 116 240533 - 240549 + r 70 -8.7 -2.62616 | overlap 240501 TCGAACCCCCGACCC TCGCCTT GTA AGGGCGA TGCTCTCCCAGCTGA Fphi_0228 240852 - 240634 - | DNA-directed RNA polymerase, subunit K/omega Fphi_0229 241510 - 240845 - | uridine kinase Fphi_0230 242348 - 241521 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 117 242028 - 242017 - G 86 -5.8 -5.39721 | TGACGACATAAAAAA GCAG GAGT CTGC ATCACATCAACAACT Fphi_0231 242740 - 242390 - | iron-sulfur cluster insertion protein ErpA Fphi_0232 244827 - 242746 - | polynucleotide phosphorylase/polyadenylase TERM 118 243902 - 243915 + g 79 -5.3 -5.05601 | CCTTCTAAGATATTT GATCT AACA AGATC TTTTTCTATATCATG TERM 119 244531 - 244513 - G 71 -3.1 -5.16237 | opp_overlap 244514 244526 244529, overlap 244514 AATCTCATTAAAAAA TCCATCA GGGAA TGATGGT CTTATAGATCTATCT Fphi_0233 245152 - 244886 - | 30S ribosomal protein S15 Fphi_0234 246974 - 245259 - | peptidoglycan glycosyltransferase Fphi_0235 247293 - 246943 - | hypothetical protein Fphi_0236 248216 - 247290 - | S-adenosylmethionine-dependent methyltransferase Fphi_0237 250312 - 248213 - | AMP-binding protein Fphi_0238 250360 - 251229 + | DNA-formamidopyrimidine glycosylase Fphi_0239 251771 - 251232 - | glutamine amidotransferase subunit PdxT Fphi_0240 252638 - 251775 - | pyridoxine biosynthesis protein TERM 120 252030 - 252042 + g 83 -6.3 -4.99035 | AGAAAAGTTTGGTAC TGGTA ACT TACCA TTTTTGTGTACATAC Fphi_0241 255176 - 252765 - | DNA topoisomerase (ATP-hydrolyzing) TERM 121 255561 - 255551 - g 70 -4 -4.87389 | opp_overlap 255551 CAGTTCAAAAAGAAA TAAC TAT GTTA TTGGTTATGGAAGCT Fphi_0242 255354 - 256154 + | hypothetical protein TERM 122 256789 - 256777 - g 72 -2.7 -5.30189 | TATAATATTAAAAAA GATTT CCC AAACC TAGAACTGGGTATCA Fphi_0243 256189 - 257163 + | tRNA-dihydrouridine synthase A Fphi_0244 257917 - 257174 - | hypothetical protein TERM 123 257437 - 257455 + g 71 -7.4 -3.56099 | TAAGATTATTATCAT CGACTTTG ATT CCAAGTCG TTTAGCAGCATTCTC Fphi_0245 260066 - 258147 - | outer membrane protein of unknown function TERM 124 260250 - 260238 - H 72 -4.9 -4.87592 | TTATAGACAATAAAA TCAAT GAT ATTGA GTACTCCATTACATG TERM 125 260959 - 260971 + G 71 -6.3 -4.23615 | overlap 260965 TAAAACTATGCTAGG TGCTT ACA AAGCA TTTGTTGAGTGTGAT Fphi_0246 260408 - 261571 + | succinyl-CoA synthetase subunit beta Fphi_0247 261603 - 262475 + | succinyl-CoA synthetase, alpha subunit Fphi_0248 262547 - 263617 + | hypothetical protein Fphi_0249 265000 - 263633 - | putative cytochrome P450 TERM 126 263728 - 263738 + g 70 -4 -4.84363 | GGGTATCACTCGGCA GTAT CTT ATAC TTTTTAATAATTTCA TERM 127 263847 - 263857 + g 76 -2.6 -5.4505 | GAACCTTCTTTAGTG TATT CTG AATA TTTTTTATTCACAAA TERM 128 263889 - 263909 + g 93 -12.7 -3.47029 | opp_overlap 263889, overlap 263883 CTATCTGGGCAAAAA CTATTGGGA TTT TCCCAATAG TTACTATTTCGATGA TERM 129 263909 - 263889 - G 100 -12.7 -4.57569 | opp_overlap 263889 263883 CTATCTGGGCAAAAA CTATTGGGA TTT TCCCAATAG TTACTATTTCGATGA TERM 130 264507 - 264483 - G 75 -10.1 -2.70354 | overlap 264479 264480 TCCGTTATAAACTCA CTCAACTCTCT TGA AGATAGTTGAG AAGATAAAATAGTAT Fphi_0250 265497 - 266204 + | short-chain dehydrogenase/reductase SDR TERM 131 266427 - 266439 + G 75 -4.8 -4.98061 | GTGCTTTAGTAATGT GGGT TTTAT ACCC TTTTGTTTACTCTAT Fphi_0251 266366 - 267385 + | hypothetical protein Fphi_0252 267798 - 267394 - | hypothetical protein Fphi_0253 267946 - 269424 + | alkaline phosphatase Fphi_0254 269427 - 270347 + | asparaginase Fphi_0255 270852 - 270349 - | hypothetical protein TERM 132 270509 - 270519 + g 77 -5.4 -4.91473 | CTATCTTCTAAAAGT GCTT TTA AAGC TTTCTTTTTAGCTTC Fphi_0256 271022 - 271744 + | copper homeostasis protein CutC family protein Fphi_0257 272511 - 271768 - | transposase TERM 133 272437 - 272448 + g 76 -4.4 -5.09245 | TTTAGCTTCATCATT GGTA TGTA TACC TTTTTGTGATTTTAA Fphi_0258 272616 - 273293 + | phosphoglycolate phosphatase Fphi_0259 273404 - 274354 + | thioredoxin reductase Fphi_0260 275600 - 274380 - | major facilitator transporter TERM 134 274887 - 274875 - G 71 -6.3 -4.14392 | opp_overlap 274874 ATATGGAGATATAAA GATTG GCG CAATC ATATATATACAAGTC TERM 135 275898 - 275880 - R 100 -11.8 -4.80455 | TAGCGAAATAGAAAA GACAGAAC AAT GTTCTGTC ACTACAATAACAAAC Fphi_0261 277743 - 275938 - | DNA mismatch repair enzyme with ATPase activity Fphi_0262 278410 - 277754 - | hypothetical protein TERM 136 278064 - 278077 + g 70 -2.4 -5.21709 | TTTCCATGTGATTTA TCAG CAGAGC CTGA TTTTTTAATATCCCA Fphi_0263 279182 - 278475 - | hypothetical protein TERM 137 279161 - 279172 + g 82 -3 -5.66868 | CCAAAGCCATTAATG CTAA AATT TTAG TTTTTTTCATTACTT Fphi_0264 279349 - 280233 + | GTPase Fphi_0265 281478 - 280291 - | ATP-binding cassette putrescine uptake system, periplasmic protein Fphi_0266 281563 - 282972 + | amino acid-polyamine-organocation (APC) superfamily protein TERM 138 283591 - 283604 + G 71 -5.3 -4.61873 | TATATCTATTTTTAG TACCA CTTA TGGTA TTTTACTTTCTAAAA Fphi_0267 283065 - 284171 + | PerM family protein TERM 139 284846 - 284862 + G 70 -4.5 -4.68103 | TCTAAGTCTTATGGA TTAAGTA ATT TACTTGA TTTTGTTGCAATTGG Fphi_0268 284165 - 285907 + | single-stranded-DNA-specific exonuclease Fphi_0269 285904 - 286686 + | biotin-(acetyl-CoA-carboxylase) ligase Fphi_0270 286683 - 287606 + | tRNA synthetase, class II (D, K and N) Fphi_0271 288751 - 287621 - | mechanosensitive ion channel protein TERM 140 288259 - 288237 - G 71 -7.8 -3.60818 | overlap 288228 288217 CTAAAAGCTCCTAAA GCAGTTAAAG GAA CTTTAAGTGC AGCTAAAATTAAAAT TERM 141 288680 - 288669 - G 77 -3 -5.56673 | AGGCATAATAAAAAA TCTA TAAA TAGA ATATACAGAATGGAA Fphi_0272 289419 - 288760 - | hypothetical protein Fphi_0273 290868 - 289513 - | acetyl-CoA carboxylase, biotin carboxylase subunit TERM 142 290593 - 290605 + g 71 -6.3 -4.13767 | CTCTTCAACTGCTTT TGCAA ATT TTGCA TTTTCAGATAAGAAA Fphi_0274 291404 - 290934 - | acetyl-CoA carboxylase, biotin carboxy carrier protein subunit TERM 143 291273 - 291297 + g 70 -2.1 -5.31275 | overlap 291269 CACAGCAGGAGCCGC TGATACAACTG TAG CAGCAGTATTA TTTTTTGTCATAAAA Fphi_0275 291845 - 291408 - | 3-dehydroquinate dehydratase Fphi_0276 292674 - 291847 - | diadenosine tetraphosphatase TERM 144 292220 - 292246 + g 71 -3.1 -5.14965 | gap 1, opp_overlap 292220, overlap 292221 TTGTTAAAAAGATTA GCCAACAA-AAG TCTT CTTGTTGTTGGA TTTTTTAATACGAAT TERM 145 292274 - 292287 + g 83 -6.7 -5.00616 | AATTCTACTTCATTA GCTCT TTTA AGAGC TTTTTTAGGCGACCA Fphi_0277 293475 - 292687 - | dimethyladenosine transferase TERM 146 292882 - 292869 - G 80 -2.5 -5.76949 | overlap 292854 TATTTTCAAAAAAAA TATAA TCGT TTATA ACCAACTTATTAGCT Fphi_0278 294889 - 293477 - | peptidyl-prolyl cis-trans isomerase (PPIase) TERM 147 293601 - 293587 - G 72 -2.8 -5.24129 | opp_overlap 293580 293589, overlap 293589 CTTTCTCAGAAAAAA TAGCTT CTA AAGCTT TTTGTTCTTTAAGCT TERM 148 293589 - 293599 + g 82 -5.4 -5.38549 | opp_overlap 293589 293587, overlap 293580 TTCTCAGAAAAAATA GCTT CTA AAGC TTTTTGTTCTTTAAG Fphi_0279 297507 - 294889 - | organic solvent tolerance protein, OstA Fphi_0280 297456 - 299384 + | arginyl-tRNA synthetase TERM 149 299712 - 299701 - g 70 -4.4 -4.77036 | TCCTAGGAGCAAAAA GAAC AATC GTTC TAGGACTTATTGTCT Fphi_0281 299469 - 300920 + | alkaline phosphatase Fphi_0282 301991 - 300933 - | asparaginase TERM 150 301283 - 301271 - G 81 -7.7 -4.44608 | GTGATTCAAAAACAA CCTCA ACA TGAGG CAATGCTTTTATTTT Fphi_0283 302595 - 302104 - | RNA methyltransferase Fphi_0284 303544 - 302573 - | delta-aminolevulinic acid dehydratase Fphi_0285 303835 - 303557 - | hypothetical protein TERM 151 303654 - 303665 + g 73 -4.4 -5.011 | TTAACAATCTCTGCA GCAA TTTC TTGC TTTTCTTGTTTCGGT Fphi_0286 304754 - 303846 - | DNA polymerase III, delta prime subunit Fphi_0287 305778 - 304762 - | putative periplasmic protease Fphi_0288 306420 - 305791 - | stringent starvation protein A TERM 152 306374 - 306360 - G 71 -8.6 -3.01712 | overlap 306362 TTTTCTTTTCTAACA GAGCAA TTC TTGCTC TCAAAGAATATGGAC Fphi_0289 306510 - 306824 + | dissimilatory sulfite reductase subunit gamma Fphi_0290 306846 - 307109 + | hypothetical protein TERM 153 307482 - 307455 - g 71 -8.6 -3.05384 | gap 1, opp_overlap 307455 307454 CTTTTTTGGAGTCAA TGCTTG-GGCAAT TAG ATTACCTCAAGCA ATATTTGGTATACTC TERM 154 307979 - 307992 + G 70 -2.4 -5.22137 | opp_overlap 307977 AAGGTTTCAATAATG CCAT AGGCCC ATGG TTTTATTTTGTAATT TERM 155 308922 - 308899 - g 83 -6.2 -5.10208 | GAATTGCAACAAAAA TATCCTAAAA TTGA TTTTAAGATA GAAGCAACTTATAGA Fphi_0291 307204 - 308970 + | dolichyl-phosphate-mannose-protein mannosyltransferase family protein Fphi_0292 309951 - 308995 - | glycosyl transferase, group 2 family protein TERM 156 310619 - 310605 - g 72 -5 -4.68705 | AGAAGCTCAATAAAA TGCTAG TAG CTAACA ATCTCAAGCATAACA Fphi_0293 310052 - 310858 + | hypothetical protein Fphi_0294 312073 - 310865 - | cell division protein FtsW TERM 157 311091 - 311079 - G 72 -4.9 -4.75776 | AAGCCAATCCAAAAA CTTAT CCC ATAAG ATAGAAATGCTTGAT Fphi_0295 313334 - 312090 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 158 312373 - 312358 - G 71 -5.4 -4.58773 | overlap 312360 CTCATTAAACTAAAA TCGCCA CCTT TGGCAA CTCCACCGAGTAATA Fphi_0296 314431 - 313334 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 159 314463 - 314480 + r 76 -4.3 -5.24129 | overlap 314459 GTGTATTGGCGCTAT TATAATA GATA TATTATA TTTTTTATAGAGAGA Fphi_0297 316092 - 314506 - | phosphoenolpyruvate carboxykinase TERM 160 315323 - 315341 + g 81 -6 -4.97957 | TCTGTCCAAGCCACT GCTTCGTT GGC AACCAAGC TTTTGTTATTATCTA Fphi_0298 316240 - 317901 + | glutaminyl-tRNA synthetase TERM 161 317913 - 317927 + T 80 -5.8 -5.06414 | ATAGCTGGTATTCTT TGTATA TTC TATACA TTTTTATTCACAAAC Fphi_0299 319345 - 317921 - | alkaline phosphatase Fphi_0300 321258 - 319417 - | (putative) drug resistance ATPase-1 (drug RA1) family protein Fphi_0301 322518 - 321292 - | drug:H+ antiporter-1 (DHA1) family protein Fphi_0302 323649 - 322606 - | hypothetical protein TERM 162 323753 - 323802 + H 71 -7.7 -3.61774 | gap 1, opp_overlap 323755 323796, overlap 323760 323796 TATTTAAGTTAAATT CATAAAGTATTTATATC-ATTTTT CCA AATAATAGATATAAGTATTTTATG TTTAAAAGTATTATC Fphi_0303 323895 - 325118 + | drug:H+ antiporter-1 (DHA1) family protein Fphi_0304 325885 - 325139 - | tRNA/rRNA methyltransferase Fphi_0305 327252 - 325882 - | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase TERM 163 326802 - 326786 - G 75 -5.1 -4.89477 | GCTTCAATAACAAAA TACCCAG AAT CTGTGTA ACGTGATGAAACACC Fphi_0306 328318 - 327374 - | integrase, catalytic region TERM 164 328932 - 328921 - g 76 -4.4 -5.20333 | GATCGACAAGAAAAA GCTA AGGA TAGC GATATTTCAGCAACT Fphi_0307 328459 - 329085 + | orotate phosphoribosyltransferase Fphi_0308 329075 - 329788 + | UDP-2,3-diacylglucosamine hydrolase Fphi_0309 329888 - 331855 + | Beta-galactosidase Fphi_0310 331867 - 333051 + | arabinose efflux permease-like protein Fphi_0311 334361 - 333075 - | threonine synthase TERM 165 333573 - 333583 + g 74 -6.8 -4.41348 | AGATATCTCACCTAT TGGG AAG CCCA TTTGTTTAGCCCAAA Fphi_0312 335327 - 334374 - | homoserine kinase Fphi_0313 337750 - 335330 - | aspartate kinase, homoserine dehydrogenase TERM 166 338600 - 338586 - g 83 -5.8 -5.02357 | CAGAACTAAACAAAA TTTTAG ATA CTAAAA AAGCAATCCCTGTTG Fphi_0314 337844 - 338944 + | aspartate-semialdehyde dehydrogenase Fphi_0315 339811 - 338993 - | hypothetical protein Fphi_0316 341178 - 339820 - | D-alanyl-D-alanine-adding enzyme TERM 167 341200 - 341220 + r 100 -12.7 -4.66318 | CCTTAATTTTCGTAG TGACAGATC ATT GATCTGTCA TTTTATTAACATCAT Fphi_0317 341908 - 341207 - | hypothetical protein Fphi_0318 342556 - 341966 - | hypothetical protein Fphi_0319 344153 - 342612 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 168 343926 - 343902 - G 77 -8.5 -3.65046 | overlap 343903 AAAAATATTAGATAA TTCCCCTTCAG CTA CTGAAGGGGTG GCAATCGAAGATTGA TERM 169 343925 - 343903 - G 84 -12 -2.77401 | overlap 343902 AAAATATTAGATAAT TCCCCTTCAG CTA CTGAAGGGGT GGCAATCGAAGATTG TERM 170 344346 - 344334 - R 70 -6.3 -4.08945 | AGTACGTCGCTAAAA CTTAC ATC GTAAG TTAGCGAAAGCATTT Fphi_0320 345254 - 344364 - | glycyl-tRNA synthetase subunit alpha Fphi_0321 345795 - 345358 - | hypothetical protein Fphi_0322 347402 - 345978 - | 4-alpha-glucanotransferase TERM 171 346682 - 346665 - G 80 -6.3 -4.83169 | gap 1, overlap 346666 346667 346669 AGTTTCTGAGAAAAA GTCAGGTG GAA CACCTG-C AACGAAACTAGGATT TERM 172 346681 - 346667 - G 75 -10 -2.6933 | overlap 346665 346666 346669 TTTCTGAGAAAAAGT CAGGTG GAA CACCTG CAACGAAACTAGGAT Fphi_0323 349886 - 347619 - | phosphorylase TERM 173 348460 - 348479 + g 71 -3 -5.16472 | gap 1 CCATAATGCTCTTTT GCA-AATTT AAT AAATTGTGC TTTTTTAACCTTTTT Fphi_0324 350048 - 350992 + | integrase, catalytic region Fphi_0325 352513 - 351056 - | glycogen synthase TERM 174 351119 - 351129 + g 83 -6.8 -4.88388 | CCAATCTACTTTTTG CTGC ATT GCAG TTTTTCTAACCTTCT TERM 175 352009 - 352020 + g 70 -4.4 -4.67168 | opp_overlap 352018, overlap 352018 AAGCAAGGTTATGCA CAGT GAAC ACTG TTTTTACAGCTTTTT TERM 176 352429 - 352467 + g 77 -5.8 -4.67234 | opp_overlap 352440 CAAAACTGGCTAATG CAGGAGGCAAAGCAGCTG TAA CATCTGCAAGACCTCCTG TTTTTAGAATTGGAT Fphi_0326 353794 - 352523 - | glucose-1-phosphate adenylyltransferase Fphi_0327 355464 - 353830 - | phosphoglucomutase TERM 177 355017 - 355037 + g 100 -9.1 -4.65494 | TCAAGTATTGGTCAA TCTTCTTAG TTT CTGAGAAGA TTTTATCTGTAATTT TERM 178 355406 - 355419 + g 73 -3.8 -5.0925 | opp_overlap 355406, overlap 355400 ACTTTGTTACGTAAA CCAG ATGTTC CTGG TTTTTGATTTTCAAA Fphi_0328 355747 - 357669 + | glycogen branching enzyme TERM 179 359171 - 359184 + G 73 -3.9 -5.14626 | TCTGTGAGAATAAGT TCTAT CTGT ATAGA TTTTATTTTGATGAT TERM 180 359640 - 359622 - g 72 -6 -4.36854 | CAAAGATAATAGAAA TTGGGGAT ATG ATCCACAA AACTATAACGCTCCT TERM 181 360542 - 360524 - g 74 -6 -4.47873 | opp_overlap 360524 ATAACAGTTATAAAA GCAATGAT GAT ATCAATGC TTTCCACTGGCAAGA Fphi_0329 357730 - 360942 + | pullulonase, type I Fphi_0330 360952 - 361794 + | shikimate 5-dehydrogenase TERM 182 362964 - 362954 - g 82 -5.4 -5.2853 | TATTGAAAAAGAAAA CGAT AGT ATCG AAAAATATTTAATGA Fphi_0331 361794 - 363122 + | hypothetical protein Fphi_0332 364010 - 363135 - | homoserine O-succinyltransferase Fphi_0333 365292 - 363982 - | O-acetylhomoserine aminocarboxypropyltransferase Fphi_0334 367007 - 365529 - | GDSL-like lipolytic enzyme TERM 183 365698 - 365712 + g 70 -7.2 -3.73399 | overlap 365694 CTTTGCATTGATGGC TGATCT AAT AGATCA TTCATTTTGACTTTA Fphi_1921 367355 - 367074 - | hypothetical protein TERM 184 367402 - 367420 + r 70 -8.8 -2.62026 | opp_overlap 367417, overlap 367401 CAGTCTGCGACTGCC ACCCCTTC AAC GAAGGGGA ATTAATATTACCGTA TERM 185 367495 - 367475 - R 76 -9 -3.11316 | TCAGTATTTAAGAGA TCCCCGTG TCAAG CACGAGGA TGACCACTGTTTTTT TERM 186 367975 - 367956 - R 70 -8.6 -2.57468 | overlap 367955 CTCTAGCAGATGAAT TTGGCGAA GTTG TCCGCCAA GCTCTACCAGTTGCC Fphi_0335 370918 - 368036 - | hypothetical protein TERM 187 368786 - 368804 + g 72 -6.1 -4.36914 | TACCTTATCTCTAGC TGTAACA ATTCC TGTTACA TTTTCTGGAAACAAA TERM 188 370040 - 370057 + g 75 -7.1 -4.1413 | TATCGGATCTTGGGT TTTGGTA CTTC TACCAAA TTTTGAAAGTATCTT Fphi_0336 371760 - 370990 - | hypothetical protein TERM 189 371732 - 371712 - G 83 -6.3 -4.95896 | opp_overlap 371712, overlap 371706 371730 ATAAAGTTATAAAAA CTATATTTA TTA CAAATATAG TTTTGACTAGATTAA Fphi_0337 373248 - 371803 - | glycine dehydrogenase subunit 2 TERM 190 372817 - 372800 - G 71 -6.3 -4.12188 | opp_overlap 372800 TCATCACGCTCAAAA TCACCAC GCTT GTGATGA TATGCTTTGATCATA Fphi_0338 374621 - 373254 - | glycine dehydrogenase subunit 1 Fphi_0339 375071 - 374688 - | glycine cleavage system H protein (lipoate-binding) Fphi_0340 376202 - 375126 - | glycine cleavage system aminomethyltransferase T Fphi_0341 378426 - 376291 - | lysine decarboxylase Fphi_0342 379217 - 378522 - | ABC transporter, ATPase component Fphi_0343 380472 - 379210 - | ABC transporter, involved in lipoprotein release, permease component TERM 191 380590 - 380602 + r 72 -4.9 -4.83593 | AGTATCAATTTTTGA TTAAC CTT GTTAA TTTTTACTAATTGTT Fphi_0344 381776 - 381171 - | peptide deformylase Fphi_0345 383773 - 381797 - | hypothetical protein Fphi_0346 384078 - 385202 + | amino acid permease-like protein Fphi_0347 385534 - 385337 - | hypothetical protein Fphi_0348 385913 - 385578 - | hypothetical protein TERM 192 385986 - 385997 + r 77 -3 -5.57729 | TACATATCGCATTTT TTAC CTCT GTAA TTTTTTATATTATTT Fphi_0349 389613 - 386134 - | DNA-directed DNA polymerase TERM 193 388072 - 388046 - G 85 -8.8 -4.13728 | TATACAGGTGCAAAA TCTGATATCACC GTT GGCGATATCACA ATACCTGCGGCATGT TERM 194 389838 - 389853 + G 75 -4.8 -4.9934 | CTATCTAAAGCCCTA CTATTT TTAA AAATAG TTTTTCTCATCTTGT TERM 195 391134 - 391168 + G 90 -11.6 -3.61517 | opp_overlap 391136 391138 391166 ATGTTCTTATGTACA GAGATTATGAATGTAC TAT GCTCATTCATAATCTC TTCTTACAAAAAAGT TERM 196 391166 - 391136 - g 79 -10.6 -2.91264 | opp_overlap 391134, overlap 391138 GTTCTTATGTACAGA GATTATGAATGTAC TAT GCTCATTCATAATC TCTTCTTACAAAAAA Fphi_0350 389805 - 391889 + | small-conductance mechanosensitive channel-like protein TERM 197 391943 - 391926 - g 76 -4.3 -5.1244 | TTATGAATATAAAAA TAAAAAA TCTT TTTTTTA GCATAGTTGCTTGTT TERM 198 392051 - 392033 - g 70 -4.6 -4.77925 | AAAAAACTCGAAAAA GATACAGA AGA TCTTTATC AATTACCTCCAAACT Fphi_0351 391913 - 392584 + | hypothetical protein Fphi_0352 392681 - 394762 + | small-conductance mechanosensitive channel-like protein Fphi_0353 395993 - 394785 - | hypothetical protein Fphi_0354 398009 - 396030 - | soluble lytic murein transglycosylase Fphi_0355 400074 - 398089 - | soluble lytic murein transglycosylase TERM 199 399028 - 399039 + g 71 -3 -5.16841 | ACTATAAGCTAGCCA GTAT TCCC ATAC TTTTTCTTGCTGTAC TERM 200 399927 - 399946 + g 91 -5.1 -5.88565 | TATTTTCATTTTTAA CTATCAA ATAATC TTGATAG TTTTTTTGTTGTAGC Fphi_0356 400769 - 400080 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase Fphi_0357 402985 - 400766 - | DNA topoisomerase IV subunit A TERM 201 400892 - 400912 + g 70 -6.9 -3.80452 | opp_overlap 400881 400891 AATACGAATAAACCT CTTACCC GCACTAA GGGTAAG TTCTTGCTCTGGTTT Fphi_0358 403833 - 403120 - | hypothetical protein Fphi_0359 404723 - 403872 - | hypothetical protein TERM 202 404665 - 404684 + g 76 -7.9 -4.05446 | GTGATCTCTTCATTC TGTGAGC GTAAAA GCTCACA TTTCTGATTCACGAG Fphi_0360 405495 - 404725 - | methionine aminopeptidase TERM 203 404804 - 404817 + g 74 -5.3 -4.65078 | TGCTCCCACTGAGCT GATAG AGAT CTATC TTTTGTTACAGCTGT TERM 204 405321 - 405336 + g 76 -7.6 -3.99985 | GATAATTCAATGGTG CAGGAT AAGC ATCCTG TTCTTTGACTATATA Fphi_0361 405616 - 405945 + | pyrophosphatase TERM 205 406329 - 406311 - g 72 -8.2 -3.38314 | opp_overlap 406311, overlap 406309 CTTAATGGTGAAACA CTTGCTGA AGG TCAACAAG TTACTTTTGAAACTC Fphi_0362 406188 - 406391 + | cold-shock DNA-binding domain-containing protein Fphi_0363 406391 - 406588 + | 30S ribosomal protein S21 Fphi_0364 407095 - 406589 - | acetyltransferase Fphi_0365 408991 - 407153 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing Fphi_0366 410375 - 409020 - | UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase Fphi_0367 411431 - 410397 - | bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase Fphi_0368 412427 - 411441 - | hypothetical protein TERM 206 412863 - 412849 - g 77 -5.8 -4.75776 | AAGCTAAGGGAAAAA CTTTTA CAC TAAAAG CGCTGATAGCTGATA Fphi_0370 412518 - 413363 + | phosphatidylserine decarboxylase Fphi_0369 413671 - 413336 - | hypothetical protein TERM 207 413907 - 413889 - H 84 -3.8 -5.80817 | overlap 413891 TTGAATATAAAAAAA TCTAACCC AAT GGGATAAA TCCAAGTAAATAGGT TERM 208 414040 - 414052 + H 77 -4.9 -5.32882 | CACTGCAATAACTGT TATTC TAA GAATA TTTTTTCTCATAATA Fphi_0372 414376 - 414807 + | M50B family metallopeptidase Fphi_0371 415748 - 414804 - | integrase, catalytic region Fphi_0373 415855 - 416079 + | M50B family metallopeptidase Fphi_0374 416214 - 417275 + | hypothetical protein TERM 209 418101 - 418069 - T 88 -9.4 -4.1347 | gap 1, opp_overlap 418069 418076, overlap 418076 TGGTAAGCATATAAA CACAAAAGCCCCATA TTTC TATGAGGCTTTT-TG TATTGCTTATCACGA TERM 210 418095 - 418076 - T 95 -8.6 -4.87328 | opp_overlap 418069 418076, overlap 418069 CATATAAACACAAAA GCCCCATA TTTC TATGAGGC TTTTTGTATTGCTTA TERM 211 418076 - 418095 + T 82 -6.4 -5.1485 | opp_overlap 418076 418069, overlap 418069 CATATAAACACAAAA GCCCCATA TTTC TATGAGGC TTTTTGTATTGCTTA TERM 212 420661 - 420678 + T 73 -7.7 -3.72485 | TAAATAATGCTCCTA CTGCTTG TATG CAAGCGG TTTCAGATTCTATTT TERM 213 420698 - 420710 + T 77 -7.7 -4.2354 | AGATTCTATTTCACT CCCTT TAT AAGGG TTCTTTTCACCTTTC TERM 214 421514 - 421533 + T 73 -9.2 -2.65808 | opp_overlap 421505, overlap 421511 TAAGGAGGTGATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 215 421982 - 421962 - T 70 -7.6 -3.3676 | gap 1, opp_overlap 421980, overlap 421977 CCCAACATTTCACAA CACGAGCTG ACGA CAGC-CGTG CAGCACCTGTCACTG TERM 216 423528 - 423504 - T 74 -6.6 -4.30978 | gap 1, opp_overlap 423510 TTTAATGCATTAAAA CACATAGCTTT TAAC AAAGCT-TGTG CATTTACTTTTACTG Fphi_0375 424460 - 423699 - | transposase for IS1106 TERM 217 424136 - 424165 + g 89 -13.9 -2.66316 | opp_overlap 424143, overlap 424134 424143 TATATTTTTTCTTCT CTATCAATAAGTT TCTA AACTTATTGATAG TACTATAGTCAGGCA TERM 218 424473 - 424495 + H 70 -6.4 -4.12942 | opp_overlap 424473 CATTTCTATTAAAAA TATACATATC TAC GATATGCATA TTTTACAGAATTTAC TERM 219 424495 - 424473 - H 90 -8.6 -4.72986 | opp_overlap 424473 CATTTCTATTAAAAA TATACATATC TAC GATATGCATA TTTTACAGAATTTAC TERM 220 424829 - 424818 - H 95 -5.8 -5.7946 | CTTCCAATAAAAAAA CGCA CAGG TGCG GCTTAAAAAATAGTA TERM 221 425148 - 425173 + H 82 -9.1 -3.79747 | opp_overlap 425154, overlap 425154 AAAATTTAAGACATA AAAAAAGCGAC CTAA GTCGCTTTTTA TTTAGTGGTGGGTGC TERM 222 425154 - 425167 + H 93 -8.1 -5.34309 | opp_overlap 425154, overlap 425148 TAAGACATAAAAAAA GCGAC CTAA GTCGC TTTTTATTTAGTGGT TERM 223 425167 - 425154 - H 100 -8.1 -5.80248 | opp_overlap 425154 425148 TAAGACATAAAAAAA GCGAC CTAA GTCGC TTTTTATTTAGTGGT TERM 224 425212 - 425228 + H 70 -8.7 -2.62616 | overlap 425180 TCGAACCCCCGACCC TCGCCTT GTA AGGGCGA TGCTCTCCCAGCTGA Fphi_0376 425561 - 427582 + | methionyl-tRNA synthetase Fphi_0377 427598 - 428809 + | major facilitator superfamily sugar transporter Fphi_0378 429417 - 428815 - | hypothetical protein Fphi_0379 430075 - 429461 - | SUA5/YciO/YrdC family protein TERM 225 430458 - 430448 - g 73 -4 -5.15969 | overlap 430450 CTCCAATGCAAAAAA TTCT CAA AGAA ACCGTTGAGTTAAAA Fphi_0380 430135 - 430665 + | intracellular septation protein A family protein Fphi_1924 430709 - 430990 + | hypothetical protein Fphi_0381 432015 - 430993 - | glucokinase Fphi_0382 432111 - 432863 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 226 433135 - 433123 - g 71 -6.3 -4.18702 | opp_overlap 433122 ATAATTGCCAATAAA CTTGA TTA TCAAG GTAGTCTTAAAGACC Fphi_0383 432865 - 433452 + | hypothetical protein TERM 227 434044 - 434022 - g 74 -6.4 -4.4448 | opp_overlap 434022 434021, overlap 434026 AAATTGTCAAAGAAA TTAATCAAAG CTT CTTTGATGAA CTTGATCTAGTACGC TERM 228 434040 - 434026 - g 70 -7.2 -3.75884 | opp_overlap 434022 434021, overlap 434022 TGTCAAAGAAATTAA TCAAAG CTT CTTTGA TGAACTTGATCTAGT TERM 229 434576 - 434555 - g 79 -8.1 -3.91144 | CCTATATTTGAGAAA CCAATGAAA GAGA TTTCACTGG GGTATACCTTGATGC Fphi_0384 433445 - 435103 + | 2-octaprenylphenol hydroxylase Fphi_0385 435104 - 435442 + | histidine triad (HIT) family protein Fphi_0386 436487 - 435834 - | purine/pyrimidine phosphoribosyl transferase family protein Fphi_0387 436494 - 437276 + | hypothetical protein Fphi_0388 438195 - 437302 - | hypothetical protein Fphi_0389 439121 - 438273 - | UDP-N-acetylmuramate dehydrogenase Fphi_0390 440433 - 439129 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Fphi_0391 441799 - 440402 - | GTP-binding protein EngA Fphi_0392 443335 - 441881 - | hypothetical protein TERM 230 443273 - 443256 - G 71 -8.5 -3.13403 | opp_overlap 443236, overlap 443254 TGTTGCTGATCAAGA TGCTGAT TTTG ATCAGCA GCATAAGATATACTA Fphi_0393 445096 - 443348 - | membrane protein of unknown function Fphi_0394 446971 - 445160 - | malate dehydrogenase TERM 231 445648 - 445667 + g 71 -5.2 -4.60487 | opp_overlap 445648 445651 GATTAGACAAAGGCA TAATAATT GGAT AATTATTA TTTTTAGCCATAGTC Fphi_0395 447122 - 448042 + | riboflavin kinase/FMN adenylyltransferase TERM 232 450774 - 450759 - gf 74 -4 -5.20735 | TGAAGAAAAAACAAA TAACTC TATT GAGTCA AATATCACTGGTCTA Fphi_0396 448135 - 450942 + | isoleucyl-tRNA synthetase Fphi_0398 450863 - 451411 + | lipoprotein signal peptidase II Fphi_0397 451873 - 451406 - | hypothetical protein Fphi_0399 452028 - 452648 + | ribosomal RNA large subunit methyltransferase J Fphi_0401 452770 - 453966 + | major facilitator transporter Fphi_0400 454757 - 453963 - | AraC family transcriptional regulator Fphi_0402 455689 - 454808 - | hypothetical protein Fphi_0403 456399 - 455692 - | glutamine amidotransferase, class I Fphi_0404 457325 - 456411 - | chromosome partition protein B Fphi_0405 457961 - 457329 - | chromosome partition protein A, ATPase TERM 233 458109 - 458128 + H 72 -5.1 -4.88067 | TATTAATTCACTTGC GAGTATT CATAGA AATACTC TTTTTATACATAAAT TERM 234 459170 - 459183 + G 71 -5.3 -4.56775 | opp_overlap 459164 TAAAGATATGCTTCC CTCTA AGCC TAGAG TTTTTGACAAAAAAT TERM 235 459510 - 459492 - g 83 -10.4 -3.21416 | opp_overlap 459496, overlap 459496 GACTCTGATGATGAA CAAACTCT ACC AGAGTTTG AAAAAGGTGAAAAAG Fphi_0406 458160 - 460457 + | DNA topoisomerase I Fphi_0407 462021 - 460666 - | hypothetical protein TERM 236 461421 - 461405 - G 72 -5.9 -4.32669 | opp_overlap 461405, overlap 461402 AATGCTATAAAAGAA CCTATCT TAT AAATAGG TCTTAAATTAATAAA Fphi_0408 462652 - 462167 - | hypothetical protein Fphi_0409 463176 - 462661 - | hypothetical protein TERM 237 462724 - 462740 + g 100 -9.5 -4.98352 | overlap 462710 TTCTTGAGTTGTTTG CTCAAGA TTA TCTTGAG TTTGTTTTGTTTGCT TERM 238 463294 - 463312 + r 71 -7.4 -3.71745 | opp_overlap 463294, overlap 463292 TTGATTTAGACTGAA GCTCTACA ATT TGTTGAGC TATTTTAGATGCTTG Fphi_0410 463753 - 463274 - | hypothetical protein Fphi_0411 464317 - 463877 - | lipoprotein of unknown function Fphi_0412 464763 - 464392 - | hypothetical protein TERM 239 465302 - 465285 - g 74 -6.3 -4.43511 | TCAAAAAGAAAAAGA TTGCAAG AGAT CTCGCAA GAGTTAGCTCAACTA TERM 240 465463 - 465449 - g 87 -2.2 -6.11229 | overlap 465441 AGCAAAACAAAAAAA TATTTC TGA AAAATA TGCATTAGGAATAGA TERM 241 466008 - 465990 - g 77 -6 -4.65584 | opp_overlap 465990 465989 465985 465984, overlap 465992 AGAAACTATACAAAA TATGTTGC AGA GCAACAAA CTTTTGATTTTTTCA TERM 242 466006 - 465992 - g 82 -8.6 -3.92324 | opp_overlap 465990 465989 465985 465984, overlap 465990 AAACTATACAAAATA TGTTGC AGA GCAACA AACTTTTGATTTTTT Fphi_0413 464853 - 466859 + | oligopeptidase A Fphi_0415 466952 - 467305 + | hypothetical protein Fphi_0414 468399 - 467302 - | phosphoribosylaminoimidazole carboxylase ATPase subunit Fphi_0416 468892 - 468401 - | phosphoribosylaminoimidazole carboxylase TERM 243 468506 - 468524 + g 74 -6 -4.58395 | opp_overlap 468505 AAGTTGTAAAATACT TGCTGC AAAAAGA GCAGCA TTTTTAGCCCCTGAC Fphi_0417 469591 - 469016 - | phosphoribosylglycinamide formyltransferase Fphi_0418 471903 - 469594 - | phosphoribosylaminoimidazolesuccinocarboxamide synthase, phosphoribosylamine--glycine ligase TERM 244 469849 - 469870 + g 83 -7.5 -4.7078 | AACATTATCAGGGCA TTTTGAAAT ATCT ATTTCAAAA TTTTTGACTGATTGA TERM 245 471600 - 471612 + g 70 -4.1 -4.78753 | CTACGAACTCAATTG GCAAG ACT TTTGC TTTTCTTGCTATTAC Fphi_0419 472946 - 471903 - | phosphoribosylaminoimidazole synthetase TERM 246 472658 - 472636 - G 84 -6.3 -5.20154 | ACATAATCTAAAAAA GTGATTGGT TTAGC ACCCATCAC AACAATATCATTTGT Fphi_0420 473909 - 473061 - | methenyltetrahydrofolate cyclohydrolase Fphi_0421 474768 - 474040 - | lipid A 1-phosphatase TERM 247 474714 - 474742 + g 90 -11.3 -3.84901 | opp_overlap 474721, overlap 474712 TGTGTTGCTTAGGTC TTTTAAAGATTTC TTT GAAGTCTTTAAAA TTAGTTTTTAGTACA Fphi_0422 475380 - 475838 + | type IV pili fiber building block protein TERM 248 476241 - 476220 - g 72 -8.1 -3.42583 | TCAACAGAGCTATAA TACACCTAC AGGA GTAAGTGTA TCAAATGGCTCCAGA Fphi_0423 476011 - 476448 + | type IV pili, pilus assembly protein Fphi_0424 476558 - 477787 + | type IV pili, pilus assembly protein TERM 249 477907 - 477934 + T 70 -8.6 -2.52896 | opp_overlap 477912, overlap 477912 AAAAGTAGTACTTGA TCAAATAGCTTA AACA TAAGCTATTTGC TAGATTCCGAGGTCA TERM 250 477929 - 477912 - T 71 -7.1 -3.75169 | opp_overlap 477907 477912 TAGTACTTGATCAAA TAGCTTA AACA TAAGCTA TTTGCTAGATTCCGA TERM 251 477912 - 477929 + T 71 -7.1 -3.794 | opp_overlap 477912, overlap 477907 TAGTACTTGATCAAA TAGCTTA AACA TAAGCTA TTTGCTAGATTCCGA TERM 252 478078 - 478057 - T 81 -7.3 -4.81644 | opp_overlap 478056, overlap 478059 TAAATAAAACCAAAA GATTCCCAC CTGC GTGGGAATG ACTGCTTTTTTTTAC TERM 253 478076 - 478059 - T 91 -9.9 -3.98231 | opp_overlap 478056, overlap 478057 AATAAAACCAAAAGA TTCCCAC CTGC GTGGGAA TGACTGCTTTTTTTT TERM 254 478101 - 478122 + T 76 -8.8 -3.53855 | opp_overlap 478106, overlap 478099 TTTTTTACATCGTCA TACTACGG CTCCGA CCGTAGTA TCTATTTTTGAACCA TERM 255 478202 - 478220 + T 100 -13.2 -3.11192 | overlap 478204 478206 TTTCTGTTTTATAGT GACAGCAC AGC GTGCTGTC TTGCATAGTCATATA TERM 256 478204 - 478218 + T 81 -10 -3.11272 | overlap 478202 478206 TCTGTTTTATAGTGA CAGCAC AGC GTGCTG TCTTGCATAGTCATA TERM 257 478260 - 478246 - T 70 -8.6 -2.70665 | overlap 478243 478242 ATATACAACAACTGA CAGATC AAT GATCTG TAACTACATATATTA TERM 258 478329 - 478359 + T 75 -3.4 -5.42259 | gap 1, opp_overlap 478339, overlap 478334 GCTTGTTTTTTATAT TGTCATACTACGG CTCCGA CCGTAGTATC-CA TTTTTTTAACCATAA TERM 259 478334 - 478355 + T 73 -8.8 -2.99257 | opp_overlap 478339, overlap 478329 TTTTTTATATTGTCA TACTACGG CTCCGA CCGTAGTA TCCATTTTTTTAACC TERM 260 478436 - 478454 + T 100 -13.2 -3.11192 | overlap 478424 478438 478440 TTTCTGTTTTGTAGT GACAGCAC AGT GTGCTGTC TTGCATAGTCATATA TERM 261 478438 - 478452 + T 81 -10 -3.11272 | overlap 478424 478436 478440 TCTGTTTTGTAGTGA CAGCAC AGT GTGCTG TCTTGCATAGTCATA TERM 262 478498 - 478476 - T 84 -9.2 -3.93398 | overlap 478477 AGTCATATACAACAA CTGACAGATC AAT GATCTGTCAC TACATATATTACTAA TERM 263 478497 - 478477 - T 100 -12.7 -2.95316 | overlap 478476 GTCATATACAACAAC TGACAGATC AAT GATCTGTCA CTACATATATTACTA TERM 264 478514 - 478552 + T 71 -2.5 -5.5208 | gap 1, opp_overlap 478514 478525, overlap 478518 478519 478521 TACATATATTACTAA TCACCTAGAGATTCCCAC CTGC GTGGGAATGTCT-GCTTA TTTTTTATATTGTCA TERM 265 478518 - 478549 + T 79 -6.6 -4.80737 | opp_overlap 478514 478525, overlap 478514 478519 478521 TATATTACTAATCAC CTAGAGATTCCCAC CTGC GTGGGAATGTCTGC TTATTTTTTATATTG TERM 266 478519 - 478548 + T 85 -10.1 -3.46002 | opp_overlap 478514 478525, overlap 478518 478514 478521 ATATTACTAATCACC TAGAGATTCCCAC CTGC GTGGGAATGTCTG CTTATTTTTTATATT TERM 267 478521 - 478546 + T 86 -10.5 -3.26205 | opp_overlap 478514 478525, overlap 478519 478518 478514 ATTACTAATCACCTA GAGATTCCCAC CTGC GTGGGAATGTC TGCTTATTTTTTATA TERM 268 478542 - 478525 - T 80 -9.9 -2.93435 | opp_overlap 478521 478519 478518 478514, overlap 478514 CTAATCACCTAGAGA TTCCCAC CTGC GTGGGAA TGTCTGCTTATTTTT TERM 269 478563 - 478593 + T 75 -3.4 -5.42259 | gap 1, opp_overlap 478573, overlap 478568 GCTTATTTTTTATAT TGTCATACTACGG CTCCGA CCGTAGTATC-CA TTTTTTTAACCATAA TERM 270 478568 - 478589 + T 73 -8.8 -2.99257 | opp_overlap 478573, overlap 478563 TTTTTTATATTGTCA TACTACGG CTCCGA CCGTAGTA TCCATTTTTTTAACC Fphi_0425 480324 - 478675 - | DNA repair protein RecN TERM 271 478799 - 478813 + g 70 -7.2 -3.7282 | ATTTTTGATTCTGTA GTATCT TTG AGATAC TTCTTAGTAACATGC TERM 272 481704 - 481691 - g 84 -6.7 -5.19328 | opp_overlap 481691 ATTTTAGAAGAAAAA GCTCT AAAA AGAGC TCTTGAGCTTCTAGA Fphi_0426 480560 - 481750 + | aspartate aminotransferase Fphi_0427 483005 - 481893 - | Zn-dependent alcohol dehydrogenase TERM 273 482678 - 482688 + g 74 -5.4 -4.69559 | GAGTTTCTCTAATTG CTTG ACA CAAG TTTGTTTTAGGATTT Fphi_0428 483460 - 483098 - | mannose-6-phosphate isomerase Fphi_0430 483778 - 485172 + | amino acid transporter (AAT) family protein Fphi_0429 485938 - 485147 - | sterol desaturase Fphi_0431 486466 - 485942 - | superoxide dismutase (Cu-Zn) precusor TERM 274 485982 - 485992 + g 71 -6.8 -4.18401 | ATTCTAGTGCCTCCA CCTC CTA GAGG TTTTGGAGTATCTGA Fphi_0432 486688 - 487632 + | integrase, catalytic region Fphi_0433 487689 - 488189 + | methionine sulfoxide reductase B Fphi_0434 488269 - 488874 + | hypothetical protein Fphi_0435 488978 - 489604 + | hypothetical protein Fphi_0436 489715 - 490848 + | chorismate synthase Fphi_0437 490851 - 491453 + | hypothetical protein Fphi_0438 491450 - 492202 + | hypothetical protein Fphi_0439 492211 - 493581 + | DNA repair protein RadA Fphi_0441 493585 - 494124 + | hypothetical protein Fphi_0440 495119 - 494121 - | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) Fphi_0442 496083 - 495433 - | hypothetical protein Fphi_0443 496225 - 496590 + | ArsR family transcriptional regulator Fphi_0444 496587 - 498746 + | heavy metal cation transport ATPase Fphi_0445 499803 - 498748 - | hypothetical protein Fphi_0446 499939 - 500826 + | LysR family transcriptional regulator TERM 275 501320 - 501307 - g 74 -5.3 -4.68908 | TCTACTGAAAATAAA TTAGC TTTT GCTAA ACAAGCTCTTAATGA Fphi_0447 500908 - 501483 + | LemA-like protein Fphi_0448 501485 - 502555 + | heat shock protein HtpX Fphi_0449 502646 - 503587 + | type IV pili, pilus assembly protein Fphi_0450 503708 - 504031 + | hypothetical protein Fphi_0451 504773 - 504066 - | tRNA nucleotidyltransferase TERM 276 504858 - 504845 - H 73 -5.3 -4.70107 | opp_overlap 504845 504843, overlap 504838 TATTAAAATAAGAAA CCTTA AGTT TAAGG TATTTCTGATATATG Fphi_0452 504871 - 505386 + | chorismate lyase Fphi_0453 505376 - 506233 + | prenyltransferase Fphi_0454 506248 - 506607 + | hypothetical protein TERM 277 506836 - 506846 + G 76 -4 -5.37345 | opp_overlap 506836 GTTTAACTCTTAAAC TAAG CAA CTTA TTTTTTATAGTTGGC Fphi_0455 506625 - 507020 + | hypothetical protein Fphi_0456 507017 - 507430 + | hypothetical protein Fphi_0457 508325 - 507567 - | hypothetical protein TERM 278 508244 - 508234 - G 87 -6.8 -5.56263 | ATTATAAAATAAAAA GCTG GAA CAGC TATCAAACCTGCTCC Fphi_0458 508965 - 508342 - | hypothetical protein TERM 279 508981 - 508993 + r 86 -6.3 -5.24129 | opp_overlap 508981 TTTTTAGATATATTA GTCTA TTT TAGAC TTTTTTGTCAACAAA Fphi_0459 509940 - 509014 - | bile acid symporter family protein TERM 280 509105 - 509118 + g 72 -8.1 -3.33696 | opp_overlap 509104 ATTGCATAAAAAGTT GCAGC AATA GCTGC TTGATTACCAAAGAA Fphi_0460 510208 - 510071 - | hypothetical protein Fphi_0461 511734 - 510205 - | deoxyribodipyrimidine photolyase-related protein Fphi_0462 513233 - 511734 - | deoxyribodipyrimidine photo-lyase Fphi_0463 513444 - 513214 - | hypothetical protein Fphi_0464 514190 - 513468 - | hypothetical protein Fphi_0465 515612 - 514293 - | 2-alkenal reductase Fphi_0466 516343 - 515714 - | OmpA family peptidoglycan-associated lipoprotein Fphi_0467 516604 - 516359 - | hypothetical protein Fphi_0468 517921 - 516614 - | group A colicin translocation; TolB protein TERM 281 517561 - 517577 + g 73 -4.5 -4.85653 | TATATGTTATAGATC TGATATA GCT TGTATCA TTTCTTTTATATATC Fphi_0469 518770 - 517937 - | group A colicin translocation; TolA protein TERM 282 518230 - 518271 + g 75 -7.3 -4.15788 | overlap 518221 518235 TTTTTTCCGCCTCGC GCTTAGCTGATGCGATAGC TTCC GCTTTTGCTTTAGCTAACC TTTCTTGACGAGCTT TERM 283 518440 - 518452 + g 73 -4.1 -4.88485 | TTAATTTTTGTTGAT GCTTT ATA AGAGC TTGTTTTTTTGCTTG Fphi_0470 519197 - 518757 - | group A colicin translocation; TolR protein Fphi_0471 519921 - 519214 - | group A colicin translocation; TolQ protein Fphi_0472 520076 - 520300 + | hypothetical protein Fphi_0473 521131 - 520310 - | CDP-alcohol phosphatidyltransferase Fphi_0474 521507 - 521145 - | chorismate mutase Fphi_0475 522475 - 521519 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 284 522090 - 522104 + g 77 -10 -3.05997 | opp_overlap 522090, overlap 522086 TACTGACCCATAGTA CCCTGA ACT TCAGGG TGTCCTTTATGACCA TERM 285 522104 - 522090 - G 75 -10 -2.64933 | opp_overlap 522086 522090 TACTGACCCATAGTA CCCTGA ACT TCAGGG TGTCCTTTATGACCA Fphi_0476 522920 - 522456 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 286 523815 - 523796 - g 72 -2.8 -5.37043 | gap 1, opp_overlap 523797 523798, overlap 523798 ATTCCAGAGAAAAAA GACCTGTGC TTA GCATAGG-C TTTAAGATTTTTGCA TERM 287 523814 - 523798 - g 74 -6.5 -4.31943 | opp_overlap 523798 523797, overlap 523796 TCCAGAGAAAAAAGA CCTGTGC TTA GCATAGG CTTTAAGATTTTTGC Fphi_0477 523102 - 524358 + | OmpA family protein Fphi_0478 524584 - 525528 + | integrase, catalytic region Fphi_0479 525639 - 526505 + | DNA processing protein DprA TERM 288 526754 - 526770 + G 77 -3 -5.48163 | ATATTATGATTCCAC CAGAGA TAGGC TCTTTG TTTTTTGCTTTATTT TERM 289 527353 - 527337 - g 80 -6.7 -4.71186 | AGTAGTAATAGAAAA TATCATT CGC AATGATA AGCTACTAACCATAA Fphi_0480 526579 - 528294 + | aspartate:alanine exchanger (AAE) family protein TERM 290 528740 - 528728 - g 77 -4.9 -5.1101 | CTATCACCGAAAAAA TAGTA ATG TACTA TCTGCGTGAAGAACT Fphi_0481 528307 - 529887 + | aspartate aminotransferase TERM 291 530100 - 530083 - g 70 -4.1 -4.82855 | TAGTAAATCCAAAAA TACTAGC TGCT GCTGGTA TGCCTAGCAATGCTT Fphi_0482 529959 - 531134 + | xanthine/uracil permease family/inorganic anion transporter, sulfate permease (SulP) family protein TERM 292 531405 - 531387 - g 77 -3 -5.4505 | overlap 531390 GGTCCGAATAAAAAA GAACGTGC TTT GCAAGATC TAGAACAACAACAAA Fphi_0483 531303 - 531638 + | hypothetical protein Fphi_0484 532015 - 531662 - | arsenate reductase Fphi_0485 532660 - 532034 - | multiple antibiotic resistance (MarC)-related protein Fphi_0486 533346 - 532741 - | MutT/NUDIX family protein Fphi_0487 533405 - 533845 + | glyoxalase family protein Fphi_0488 534134 - 533886 - | hypothetical protein Fphi_0489 535877 - 534363 - | fumarate hydratase, class I Fphi_0490 538241 - 536202 - | ATP-dependent DNA helicase TERM 293 538562 - 538538 - g 70 -3.6 -5.011 | ATCCAAACAACAAAA CTCATCAACA AACAA TGCCAATGAG AAAATAGATTACGAT Fphi_0491 538374 - 538700 + | hypothetical protein Fphi_0492 538837 - 539073 + | 50S ribosomal protein L28 Fphi_0493 539105 - 539260 + | 50S ribosomal protein L33 Fphi_0494 539292 - 539978 + | septum formation inhibitor Fphi_0495 540006 - 540827 + | septum formation inhibitor-activating ATPase Fphi_0496 540833 - 541105 + | cell division topological specificity factor protein TERM 294 541904 - 541888 - g 73 -4.5 -4.96848 | opp_overlap 541888 541889, overlap 541889 TTCTGTAGATAAAAA CTTCTTT TAT AAAGAAA TTTTGAGGTAATTAT Fphi_0497 541121 - 541915 + | ABC transporter, ATP-binding protein TERM 295 542293 - 542271 - g 89 -11.4 -3.40639 | AATCGGACTAATGAA GGCTACTGAT CAA ATCAATAGCC TAAAGGTTATGAATG Fphi_0498 541918 - 542682 + | ABC-type transport system permease protein Fphi_0499 542682 - 543212 + | hypothetical protein Fphi_0500 543289 - 543954 + | hypothetical protein Fphi_0501 543951 - 544244 + | hypothetical protein Fphi_0502 544262 - 544498 + | BolA family protein Fphi_0503 545784 - 544684 - | VacJ like lipoprotein Fphi_0504 545931 - 546626 + | 3-demethylubiquinone-9 3-methyltransferase Fphi_0505 546630 - 547373 + | hypothetical protein TERM 296 547850 - 547886 + G 89 -8.7 -4.62783 | opp_overlap 547870 AGGATGGCTATTTAG TGCCCAGCTTACAGC AAAAGCA GCTGGGAACTGGGCA TTTTTGGCATGGGTA Fphi_0506 547761 - 549263 + | amino acid-polyamine-organocation family protein Fphi_0507 549367 - 550071 + | hypothetical protein TERM 297 550300 - 550310 + G 72 -2.6 -5.26316 | TATTTTTGGTGCAAT TTTT GTT AAAA TTTTTTGTGAAATAC Fphi_0508 550100 - 550387 + | hypothetical protein Fphi_0509 551759 - 550389 - | amino acid transporter Fphi_0510 551769 - 552824 + | alanine racemase Fphi_0511 553181 - 554413 + | transposase mutator family protein Fphi_0512 554467 - 556320 + | chitinase TERM 298 556333 - 556350 + T 71 -7.1 -3.76383 | opp_overlap 556333 TAATCTTTTCTTAAA TCTCAAT CTCC ATTGAGA TTATCTTCCATTTTT Fphi_0513 556819 - 556328 - | acetyltransferase Fphi_0514 558021 - 556831 - | drug:H+ antiporter-1 (DHA1) family protein TERM 299 557415 - 557429 + g 70 -4.2 -4.82154 | opp_overlap 557410 TCTTATATGATTCTA GAAGCT TAT AGCTAC TTTTTGGTATAGCTT TERM 300 557985 - 557996 + g 77 -3 -5.40474 | TAAGAATAACTGTTT TATC AGAT GATA TTTTTTTAAAAGGAT Fphi_0515 559022 - 558078 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Fphi_0516 560405 - 559026 - | cysteine--tRNA ligase TERM 301 559470 - 559485 + g 71 -3.3 -5.10933 | TCTCTCTACCGATGC TCTAG CGTTAT CTAGA TTTTCTTTTGAATAA TERM 302 559865 - 559883 + g 76 -4.6 -5.06414 | opp_overlap 559865 CCATTTTCCAAAGTA CAAAATCC ATA GGATTTTC TTTTTCTTCAACAAC Fphi_0517 562570 - 560483 - | hypothetical protein Fphi_0518 563500 - 562580 - | hypothetical protein TERM 303 563086 - 563068 - G 70 -8.2 -3.25491 | opp_overlap 563068 563077 AATTTACATCAGTAA GAAAAGTC CGA GACTCTTC TCTTTTTATCATAAT TERM 304 563077 - 563088 + g 73 -4.4 -4.93898 | opp_overlap 563068, overlap 563068 CAGTAAGAAAAGTCC GAGA CTCT TCTC TTTTTATCATAATAT Fphi_0519 564239 - 563514 - | pilus assembly protein Fphi_0520 564948 - 564325 - | pilus assembly protein Fphi_0521 566364 - 564958 - | pilus assembly protein TERM 305 566307 - 566327 + g 91 -4.8 -5.93809 | gap 1 AAGCAAATATCATCG CAGGCATCA ATGA TGAT-CCTG TTTTTTTTGTAAAAC Fphi_0522 567275 - 566361 - | pilus assembly protein Fphi_0523 567609 - 567259 - | hypothetical protein Fphi_0524 568980 - 567697 - | HlyC/CorC family transporter-associated protein TERM 306 568223 - 568234 + g 73 -4.4 -4.9138 | TGATAAACAGGATAT CTTG TGTA CAAG TTTTCTTTAACTACT TERM 307 568875 - 568863 - G 71 -6.3 -4.18018 | opp_overlap 568862 568866 568871 TTTTCTTACTTAAAA TCTCA ACC TGAGA GGTTCTTATTTTAAC Fphi_0525 570670 - 568991 - | glycosyl transferase, group 2 TERM 308 570306 - 570317 + g 82 -3 -5.61881 | CCTAGTTCTTCATCA GTTT CCTC AAAC TTTTTATTTTTACCG Fphi_0526 572201 - 570735 - | proline:Na+ symporter TERM 309 572244 - 572264 + r 70 -6.3 -4.07687 | opp_overlap 572242 572244 572245, overlap 572242 572245 TCTATAAACTTAACA TTTTCAAAT GCT ATTTGAAAG TTTTACAACAGAAGT Fphi_0527 573363 - 572377 - | fructose 1,6-bisphosphatase II TERM 310 572732 - 572715 - G 73 -7.7 -3.88291 | overlap 572718 GAGCAGCTGCAGAAA GAACTCC TTCA GGAGCTC CTCCGGTACCTATAA Fphi_0528 574022 - 573384 - | hypothetical protein Fphi_0529 575488 - 574034 - | lysine:H+ symporter Fphi_0530 576411 - 575749 - | phosphatidic acid phosphatase PAP2 superfamily protein TERM 311 577233 - 577210 - g 72 -2.5 -5.32882 | GACTACGACAAAAAA TCTTGAAAA AAACAA TCCTCAAGA AGCCTCTATTAGCTT Fphi_0531 576533 - 578998 + | cell division protein Fphi_0532 578999 - 579616 + | lipoprotein releasing system, subunit A Fphi_0533 581218 - 579902 - | membrane protein of unknown function Fphi_0534 581541 - 581341 - | hypothetical protein Fphi_0535 581658 - 583109 + | K+ transporter (trk) family protein Fphi_0536 583597 - 583115 - | putative lipoprotein Fphi_0537 584385 - 583687 - | activator of osmoprotectant transporter ProP TERM 312 584605 - 584589 - R 75 -9.5 -2.62396 | overlap 584591 CAGTTGGTTAGAGCA CAGCATT CAT AATGCTG GGGTCACTGGTTCAA Fphi_0538 585738 - 584848 - | hypothetical protein TERM 313 585219 - 585231 + g 73 -7.7 -3.77484 | GTGCGGCATTGATCT CGTTC ATT GAACG TTTAACATTTTCCTC TERM 314 585771 - 585783 + r 70 -7.7 -3.47462 | opp_overlap 585764, overlap 585770 585764 ACATAAATTATGACT GTGGA AAA TCCAC TATTATATTATAGTT Fphi_0539 586212 - 585763 - | hypothetical protein Fphi_0540 586616 - 586221 - | hypothetical protein Fphi_0541 586803 - 587531 + | phenol 2-monooxygenase Fphi_0542 587618 - 587866 + | 50S ribosomal protein L31 TERM 315 587897 - 587911 + T 100 -7.1 -5.64274 | opp_overlap 587897 ATCAAAATATCTAAA CCAGC TTTAT GCTGG TTTTTTTATACCTAA TERM 316 587911 - 587897 - T 71 -7.1 -3.85786 | opp_overlap 587897 ATCAAAATATCTAAA CCAGC TTTAT GCTGG TTTTTTTATACCTAA Fphi_0543 589471 - 587966 - | glutamate--cysteine ligase Fphi_0544 591067 - 589523 - | multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) transporter TERM 317 590957 - 590945 - G 80 -6.3 -4.79667 | AAAAGCCACCAAAAA TGCTT GTA AAGCA GATCCACTACCAAAA Fphi_0545 592294 - 591092 - | hypothetical protein TERM 318 591462 - 591481 + g 71 -6.4 -4.15881 | TGTGTTATAGCTTCA CGCGCATA CTTA TATGCTCG TTGTTTATCATCTTT TERM 319 592412 - 592389 - R 77 -9.6 -2.77538 | opp_overlap 592370 592389, overlap 592388 592387 592391 TTTTTAACAAAAATC TACTTGCCTG CCTT CCGGCAAGTA TTTTATATATACATC TERM 320 592389 - 592412 + r 90 -9.6 -4.61868 | opp_overlap 592389 592388 592387 592391, overlap 592370 TTTTTAACAAAAATC TACTTGCCTG CCTT CCGGCAAGTA TTTTATATATACATC Fphi_0546 592754 - 592377 - | hypothetical protein Fphi_0547 593946 - 592762 - | dihydrofolate synthase TERM 321 593905 - 593915 + g 71 -6.8 -4.2651 | GCAATTGCGAGCATC TGGC TTA GCCA TTATTTTAGCTATTT Fphi_0548 594863 - 593961 - | acetyl-CoA carboxylase, carboxytransferase subunit beta Fphi_0549 595325 - 594903 - | nucleoside-diphosphate kinase Fphi_0550 597038 - 595398 - | CTP synthetase Fphi_0551 597198 - 598709 + | hypothetical protein Fphi_0552 598816 - 600072 + | argininosuccinate synthase Fphi_0553 600077 - 601270 + | argininosuccinate lyase TERM 322 601574 - 601554 - g 76 -2.6 -5.54079 | TCAAAAATGAAAAAA GCACTCTA GTATA TAGAATAC CTAATGAGCCAGCTC Fphi_0555 601382 - 601837 + | arginine repressor Fphi_0554 603010 - 601826 - | ornithine aminotransferase TERM 323 603056 - 603066 + H 71 -2.6 -5.54403 | AAACACAAATTAATC TTTA TTG TAAA TTTTTATTCTTTTTT TERM 324 603294 - 603281 - g 70 -3.9 -4.91657 | opp_overlap 603281 AAGCAAGAAAATAAA GAATA CACA TATTC TTTGGATGAATTAAG Fphi_0556 603155 - 604180 + | N-acetyl-gamma-glutamyl-phosphate reductase Fphi_0557 604195 - 605385 + | amino-acid N-acetyltransferase Fphi_0558 605382 - 606188 + | acetylglutamate kinase TERM 325 607043 - 607055 + G 72 -4.8 -4.69028 | overlap 607044 607046 TTAAATAGAAAATTT GTGC AAAAA GCAC TTTTGTATATATTAT Fphi_0559 606185 - 607093 + | ornithine carbamoyltransferase Fphi_0560 609031 - 607145 - | heat shock protein 90 Fphi_0561 609827 - 609147 - | ion transport protein Fphi_0562 610377 - 609940 - | 50S ribosomal protein L17 Fphi_0563 611401 - 610424 - | DNA-directed RNA polymerase subunit alpha Fphi_0564 612078 - 611458 - | 30S ribosomal protein S4 Fphi_0565 612489 - 612100 - | 30S ribosomal protein S11 Fphi_0566 612882 - 612526 - | 30S ribosomal protein S13 TERM 326 612942 - 612952 + r 70 -5.4 -4.56775 | opp_overlap 612951 TGCATTTTGTAACTT GCTA GGA TAGC TTTTTAAAAACAAAT Fphi_0567 614460 - 613135 - | preprotein translocase subunit SecY Fphi_0568 614902 - 614471 - | 50S ribosomal protein L15 TERM 327 614719 - 614709 - G 71 -5.4 -4.50058 | opp_overlap 614709 GACGCAGAAGTAAAA CCAA ATT TTGG TAATCTTCTTTGTAT Fphi_0569 615094 - 614909 - | 50S ribosomal protein L30 Fphi_0570 615601 - 615101 - | 30S ribosomal protein S5 Fphi_0571 615982 - 615629 - | 50S ribosomal protein L18 Fphi_0572 616541 - 616005 - | 50S ribosomal protein L6 TERM 328 616355 - 616368 + g 71 -5.3 -4.47118 | opp_overlap 616355, overlap 616352 TACCAGATTGAGCAA TAGCA TTTT TGCTA TTATTTTTAGGTGTT Fphi_0573 616959 - 616561 - | 30S ribosomal protein S8 Fphi_0574 617280 - 616975 - | 30S ribosomal protein S14 Fphi_0575 617838 - 617299 - | 50S ribosomal protein L5 Fphi_0576 618168 - 617851 - | 50S ribosomal protein L24 Fphi_0577 618560 - 618192 - | 50S ribosomal protein L14 Fphi_0578 618902 - 618651 - | 30S ribosomal protein S17 Fphi_1925 619114 - 618914 - | 50S ribosomal protein L29 Fphi_0579 619527 - 619114 - | 50S ribosomal protein L16 Fphi_0580 620195 - 619527 - | 30S ribosomal protein S3 Fphi_0581 620545 - 620210 - | 50S ribosomal protein L22 Fphi_0582 620839 - 620561 - | 30S ribosomal protein S19 Fphi_0583 621678 - 620854 - | 50S ribosomal protein L2 Fphi_0584 621998 - 621699 - | 50S ribosomal protein L23 Fphi_0585 622618 - 621995 - | 50S ribosomal protein L4 Fphi_0586 623283 - 622651 - | 50S ribosomal protein L3 Fphi_0587 623705 - 623388 - | 30S ribosomal protein S10 Fphi_0588 625842 - 623725 - | elongation factor G TERM 329 624318 - 624300 - G 71 -7.4 -3.55181 | overlap 624294 CAAACTTAACCACAA CGTGACCA TAC TGACCACG ACCACCTGACTGACG Fphi_0589 626330 - 625857 - | 30S ribosomal protein S7 Fphi_0590 626743 - 626369 - | 30S ribosomal protein S12 Fphi_0591 627475 - 626879 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Fphi_0592 627925 - 627479 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Fphi_0593 628734 - 627940 - | phosphatidate cytidylyltransferase Fphi_0594 629468 - 628731 - | di-trans,poly-cis-decaprenylcistransferase TERM 330 629246 - 629234 - G 79 -4.1 -5.252 | GAGTTTTATAAAAAA GATCC ATT AGATC AGAAACTTCTTTAGC Fphi_0595 630109 - 629552 - | ribosome recycling factor Fphi_0596 630887 - 630138 - | uridylate kinase TERM 331 630204 - 630184 - G 72 -9.1 -2.7165 | overlap 630188 630196 GAATCAACTACAGCA TCAACCAAA GCA TTTGGCTGA GTCAAATCAAACACA TERM 332 630845 - 630825 - G 74 -9.1 -3.05935 | opp_overlap 630824 630825, overlap 630830 AGACTCTCCACTTAA CTTAAGAAG AAC CCTCTTAAG CTTTGGAGTATTTTG Fphi_0597 631760 - 630891 - | elongation factor Ts TERM 333 631588 - 631604 + g 70 -2.2 -5.28826 | TCGATAACACCTTCA GCTGCA ATACG TGAAGC TTTTTTGTCAGCTTT Fphi_0598 632555 - 631782 - | 30S ribosomal protein S2 Fphi_0600 632740 - 633237 + | dihydrofolate reductase Fphi_0599 634169 - 633234 - | cysteine synthase A TERM 334 633560 - 633577 + g 86 -2.7 -5.9362 | ACTTAGGCTCTACAG CTACAAT TTTG ATAGTAG TTTTTTTCTGTTTTA Fphi_0601 634284 - 634802 + | Serine O-acetyltransferase Fphi_0602 636444 - 634990 - | hypothetical protein TERM 335 636847 - 636873 + r 70 -8.8 -2.76162 | opp_overlap 636853, overlap 636853 TTTCTAATAGACATA AAAAAAGCCACT TAA GGTGGCTTTTTA ATTTGGCATCCCGTA TERM 336 636867 - 636853 - R 100 -7.1 -5.77988 | opp_overlap 636847 636853 ATAGACATAAAAAAA GCCAC TTAAG GTGGC TTTTTAATTTGGCAT TERM 337 636853 - 636867 + r 88 -7.8 -4.99134 | opp_overlap 636853, overlap 636847 ATAGACATAAAAAAA GCCACT TAA GGTGGC TTTTTAATTTGGCAT Fphi_0603 638455 - 637046 - | glutamyl-tRNA synthetase Fphi_0604 640056 - 638587 - | fumarate hydratase TERM 338 639326 - 639350 + g 75 -8.7 -3.48824 | overlap 639327 ATCTCATATACACCT TTCAAAGATTC TTT GATTCTTTGAA TATTCTTCTCAAGTA TERM 339 639327 - 639341 + g 73 -7.2 -4.01703 | overlap 639326 TCTCATATACACCTT TCAAAG ATT CTTTGA TTCTTTGAATATTCT Fphi_0605 640133 - 640825 + | hypothetical protein Fphi_0606 640924 - 641577 + | dihydropteridine reductase TERM 340 642618 - 642608 - g 76 -6.8 -4.56914 | TTACTCAAAGCAAAA GCTC TCG GAGC TAAAGCTGGACTAAT Fphi_0607 641636 - 642784 + | L-lactate dehydrogenase Fphi_0608 644037 - 642787 - | glutamate-5-semialdehyde dehydrogenase TERM 341 643276 - 643289 + g 73 -4.5 -4.84529 | opp_overlap 643275 643276, overlap 643277 TAAAGCATTACAAAC TCCAG GACG CTGGG TTTTTGCATTTATAA TERM 342 643395 - 643407 + g 76 -4.1 -5.08011 | TTGAAATAGTAGCCT GCTGT TGG ATAGC TTTTTTAAGACTTTT TERM 343 643913 - 643929 + g 70 -3.7 -4.88736 | overlap 643914 TGCAAAATATACTCA GCATTGT CTA ACAATGA TTTTTCTAACTCATG Fphi_0609 645168 - 644038 - | gamma-glutamyl kinase TERM 344 644938 - 644948 + g 77 -5.4 -4.91084 | AGCTACAGCTTGCTT CTCT GGT AGAG TTTTTGGCTTTTGTT Fphi_0610 645666 - 645280 - | putative MutT/NUDIX hydrolase Fphi_0611 646363 - 645671 - | hypothetical protein TERM 345 646321 - 646311 - G 82 -3.2 -5.63374 | GGAAGACCAAAAAAA GGAA CTA CTCC TCCATCTACAACCCA Fphi_0612 646700 - 646368 - | hypothetical protein TERM 346 647328 - 647313 - g 71 -3.2 -5.03227 | overlap 647314 ACACGATAAACAAAA CGCTCT AAGT AGAGCC TTACAAGAGTACAAA TERM 347 647439 - 647422 - g 83 -4.9 -5.48825 | CATGATCTAAAAAAA GCCATTA TCGC TAATGAC ATAAATAAAATTCAG TERM 348 648095 - 648085 - g 73 -4 -5.06414 | CTTGCTGAACAAAAA TCTT TTA AAGA ACTAGAAGTCAACAG Fphi_0613 646927 - 649461 + | phosphoenolpyruvate carboxylase Fphi_0614 650084 - 649476 - | mobilization/cell filamentation protein-like protein Fphi_0615 650536 - 650084 - | hypothetical protein TERM 349 650211 - 650199 - G 74 -3.5 -5.31059 | ATATCAATTAAAAAA TTAAT CCT ATTAA AGATAGCATAACCAA Fphi_0616 651027 - 650533 - | hypothetical protein TERM 350 650770 - 650751 - G 72 -5.1 -4.77216 | opp_overlap 650753 AAGAATAGTCAAAAA TATAACG TTTCAT CGTTATA CTATATATTAGACTA Fphi_0617 653786 - 651027 - | valyl-tRNA synthetase Fphi_0618 654364 - 653927 - | DNA polymerase III (chi subunit) protein Fphi_0619 654901 - 654461 - | hypothetical protein Fphi_0620 655414 - 654932 - | hypothetical protein Fphi_0621 656078 - 655416 - | pyroglutamyl-peptidase I Fphi_0622 657710 - 656088 - | hypothetical protein TERM 351 656572 - 656582 + g 71 -3.2 -5.0538 | overlap 656566 TTAAAACTTGTACTA GGTA TAG TGCC TTTTTTGACATCAAA TERM 352 656663 - 656677 + g 74 -6.4 -4.32201 | opp_overlap 656663 ACCATTTTAACATAA CAGCAG GAA CTGTTG TTTTACCTTGCTTAA Fphi_0623 658593 - 657700 - | TPR repeat-containing protein Fphi_0624 659582 - 658584 - | hypothetical protein Fphi_0625 660585 - 659584 - | IMP dehydrogenase/GMP reductase:von Willebrand factor, type A Fphi_0626 661058 - 660582 - | hypothetical protein Fphi_0627 661959 - 661048 - | hypothetical protein Fphi_0628 662926 - 661970 - | MoxR-like ATPase TERM 353 662540 - 662523 - G 71 -6.3 -4.16101 | AAAAGATTAGACAAA GGATAAG TCTT CTTACCC ACTGTGATTTGCTTC Fphi_0629 663074 - 663505 + | hypothetical protein TERM 354 663657 - 663673 + G 74 -2.3 -5.55664 | AACCATACTCAATAT GATTTTT TTA AAGGATC TTTTTTTAGTGCTGA Fphi_0630 663507 - 664358 + | pyridoxal kinase Fphi_0631 664358 - 665053 + | hypothetical protein TERM 355 665166 - 665150 - g 86 -8.1 -4.67651 | ACACTTTAAAACAAA TTTCAGA TAC TCTGAAA GCAAAAATAATCAAC Fphi_0632 665125 - 666171 + | UDP-3-O-(3-fatty acid) glucosamine N-acyltransferase Fphi_0633 666549 - 668303 + | cytochrome d ubiquinol oxidase subunit I Fphi_0634 668314 - 669510 + | alkaline phosphatase Fphi_0635 669695 - 670441 + | polar amino acid uptake transporter Fphi_0636 672610 - 670454 - | primosomal protein N' Fphi_0637 673182 - 672610 - | nicotinamide ribonucleoside (NR) uptake permease (PnuC) family protein Fphi_0638 674398 - 673202 - | tRNA processing ribonuclease BN TERM 356 674200 - 674182 - G 71 -5.4 -4.61231 | opp_overlap 674172, overlap 674172 674196 GCATATTCTGAAAAA GAAAATTT TGT AAATTCTC AGAAAGAGAACTAAA Fphi_0639 674411 - 675001 + | trp repressor binding protein Fphi_0640 675013 - 675471 + | outer membrane protein TERM 357 675570 - 675580 + F 82 -5.4 -5.52384 | AGCCTTTATTCATCT TTGC TAA GCAA TTTTTTTGATAAAAG TERM 358 675747 - 675765 + G 73 -7.4 -3.72678 | opp_overlap 675742, overlap 675749 GCCATATAACCTTAC CCTTGCAG CAA CTGCAATG TTTAGCTCATCTTTC TERM 359 675749 - 675763 + G 75 -8.6 -3.43511 | opp_overlap 675742, overlap 675747 CATATAACCTTACCC TTGCAG CAA CTGCAA TGTTTAGCTCATCTT TERM 360 676304 - 676315 + G 73 -4.4 -4.85267 | GCTTTACTATCTATG GAAC CACT GTTC TTTTTGCTGATTTAT Fphi_0641 675610 - 676833 + | major facilitator transporter TERM 361 677165 - 677150 - g 74 -6.2 -4.56775 | opp_overlap 677158 ATCCTCGGTCAAAAA TGCTAA GCTG TTAGCA TCAGCTGACGTAATT Fphi_0642 676905 - 677825 + | manganese/zinc/iron chelate uptake transporter family protein Fphi_0643 677827 - 678504 + | ABC transporter, ATP-binding protein Fphi_0644 678425 - 679288 + | permease of ABC transporter Fphi_0645 679345 - 680097 + | dienelactone hydrolase family protein Fphi_0646 681017 - 680475 - | hypoxanthine phosphoribosyltransferase Fphi_0647 682306 - 681020 - | adenylosuccinate synthetase TERM 362 681642 - 681628 - G 74 -6.4 -4.29928 | opp_overlap 681628 AATCAATATCTAAAA GTACTC CCT GAGCAC CTTCATATACAACAT Fphi_0648 682484 - 684031 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Fphi_0649 685367 - 684099 - | serine permease Fphi_0650 686017 - 685472 - | outer membrane lipoprotein TERM 363 685970 - 685980 + g 80 -2.6 -5.6473 | AAGCAAAACCAGAGT TATT GAT AATA TTTTTTTCATATTGT Fphi_0651 686075 - 687052 + | DNA polymerase III, delta subunit TERM 364 687926 - 687914 - g 83 -7.7 -4.71463 | overlap 687907 AAGCAAAACAAGAAA TCCTG AAA CAGGA AGAGAAGCTATAAAG Fphi_0652 687165 - 688202 + | glutamate--ammonia ligase TERM 365 688339 - 688329 - g 70 -4 -4.93296 | TGAGTATTATAAAAA CATT TTC AATG CCATCTGTAACAATG TERM 366 688863 - 688827 - g 71 -8.9 -3.07344 | GCATGTTGGAAGAGA GCCTAGTGGTATTACAT TCA ATGCAATAGCACTAAAC AAATATGACCGCCCT Fphi_0653 688276 - 689820 + | glutaminase TERM 367 690267 - 690254 - g 70 -2.3 -5.25803 | opp_overlap 690254 AACCTTGATAAAAAA GGTGG GGGT CAACC TGTTTGGATTAAAAA Fphi_0654 689963 - 690505 + | hypothetical protein Fphi_1926 690884 - 690561 - | hypothetical protein TERM 368 690649 - 690634 - G 77 -3.4 -5.5112 | GCTAGCAAGAAAAAA TAATAT AAAA ATATTA CAGGTGCCATGAAAA Fphi_0655 692583 - 690901 - | lysyl-tRNA synthetase TERM 369 692388 - 692404 + g 71 -5.2 -4.57341 | TTTGTGAGTTTTCTT GCATAT CCGTT ATATGC TTTTTAACAAGAGTT Fphi_0656 692943 - 692659 - | endonuclease TERM 370 692981 - 692961 - R 89 -11.2 -2.89742 | opp_overlap 692954 692979 TTCAATCCTTATAGA TCCTACGG TCAAG CCGTAGGA TGACATAATCCTCTA Fphi_0657 694038 - 692998 - | peptide chain release factor 2 TERM 371 693461 - 693483 + g 74 -6.4 -4.43844 | AAAGATGTATGGCGT TTACTATTTG AGT CAAATGGTGA TTTTCTCACTAATCG TERM 372 694182 - 694157 - H 74 -6.3 -4.56969 | opp_overlap 694157 694155 AATTTTACAAACAAA GAGTATTGAAA GTTA TTTAAATACTC TCTTATTCTTTTGGC TERM 373 694907 - 694879 - g 85 -8.9 -4.21194 | opp_overlap 694880, overlap 694880 GCTTATCATGCAAAA GGTAGTCTAAGAG ATG CTCTTAGTCTACT TGATCAAGCTATAAG TERM 374 694906 - 694880 - g 87 -12.4 -3.12395 | opp_overlap 694880, overlap 694879 CTTATCATGCAAAAG GTAGTCTAAGAG ATG CTCTTAGTCTAC TTGATCAAGCTATAA TERM 375 694880 - 694906 + G 91 -12.4 -3.16191 | opp_overlap 694880 694879 CTTATCATGCAAAAG GTAGTCTAAGAG ATG CTCTTAGTCTAC TTGATCAAGCTATAA Fphi_0659 694246 - 695901 + | DNA-directed DNA polymerase Fphi_0658 696755 - 695898 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase Fphi_0660 698110 - 696977 - | cell division protein FtsZ TERM 376 697585 - 697569 - G 73 -8 -3.69323 | opp_overlap 697569 TTAGCAGCATTGAAA GCATCG ATTAG CGATGC TCCTTTGCCAAGTAC Fphi_0661 699413 - 698151 - | cell division protein FtsA Fphi_0662 700198 - 699515 - | cell division protein FtsQ Fphi_0663 701085 - 700192 - | D-alanine--D-alanine ligase Fphi_0664 701520 - 701092 - | zinc-binding protein Fphi_0665 701687 - 703372 + | 30S ribosomal protein S1 TERM 377 703409 - 703434 + F 100 -7.7 -6.02919 | opp_overlap 703404 703409 TCTAAATCTACAAAA CCTATAATCTA TTTA TAGCTTATAGG TTTTTTTATTTATAA TERM 378 703434 - 703409 - f 80 -7.7 -4.51196 | opp_overlap 703409, overlap 703404 TCTAAATCTACAAAA CCTATAATCTA TTTA TAGCTTATAGG TTTTTTTATTTATAA Fphi_0666 703496 - 704038 + | putative SUA5/YciO/YrdC family protein Fphi_0667 704132 - 704668 + | membrane protein of unknown function Fphi_0668 705787 - 704894 - | 1-acylglycerol-3-phosphate acyltransferase Fphi_0669 707046 - 705880 - | competence protein Fphi_0670 707993 - 707049 - | integrase, catalytic region Fphi_0671 708942 - 708061 - | competence-related protein TERM 379 708207 - 708195 - G 74 -6.3 -4.31692 | opp_overlap 708187 708195 AAGCTACCACTAAAA GCATT ATT AATGC TCGTTGTGTTGGTAA TERM 380 708270 - 708254 - G 70 -4.3 -4.65494 | AAACTATATATAAAA GCCACTA CCA CAGAGGC AATAACACCGGTATA TERM 381 710109 - 710099 - g 71 -3.2 -5.03747 | AAAGGCGTTAAAAAA GCTA ATT CAGC AGAGGAGCTCAAGCA Fphi_0672 709097 - 710566 + | glutathione synthase/ribosomal protein S6 modification enzyme TERM 382 710595 - 710614 + G 100 -9.4 -5.39721 | opp_overlap 710582 710593 GATCTTCAAACACTT GTAGAACT TGAA AGTTCTAC TTTTTTGTCTGATAA Fphi_0673 710553 - 710984 + | acetyltransferase GNAT family protein TERM 383 711532 - 711552 + G 70 -8.4 -3.25088 | opp_overlap 711531, overlap 711523 711546 711547 TGCTTGGAATGATAT GCATCAAT CATTT ATTGATGC TTCATCAGTTTCAGC TERM 384 712392 - 712372 - g 75 -6.9 -4.14454 | overlap 712369 AAATAAAAAAATTAA TCTCAAATC ACC GATTAGAGA TATCAAGATATTGAA Fphi_0674 711416 - 713140 + | ABC-type anion transport system, duplicated permease component Fphi_0676 713169 - 713951 + | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Fphi_0675 714514 - 713945 - | YggT family protein Fphi_0677 715442 - 714528 - | hypothetical protein Fphi_0678 716551 - 715724 - | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase Fphi_0679 717207 - 716539 - | lipoprotein releasing system, subunit B, outer membrane lipoprotein Fphi_0680 717673 - 717134 - | carbonic anhydrase Fphi_0681 719550 - 717676 - | monovalent cation:proton antiporter TERM 385 718493 - 718505 + g 74 -6.3 -4.29139 | opp_overlap 718492 ATCCCCATGACAATT CTTTC TGC GAAAG TTGTTTTAGATTTAA TERM 386 719456 - 719428 - G 82 -7.6 -4.57543 | gap 1 AAGAATCAAAAATAA TATCGATGGAAGC TTCA GCCTCCAT-GATA AAAACTGCGATACAA TERM 387 719476 - 719461 - G 70 -4 -4.91109 | gap 1, overlap 719462 719463 CCTCCATGATAAAAA CTGCGAT ACA ATCGC-G AAAAATAATATTAGA Fphi_1913 719732 - 720421 + | hypothetical protein Fphi_0682 721226 - 720408 - | hypothetical protein Fphi_0683 721957 - 721232 - | short chain dehydrogenase TERM 388 721403 - 721414 + g 71 -3 -5.1167 | CAAATCAATTCCAGT TACT AAAG AGTA TTTTTCTATTGCCTT TERM 389 721575 - 721557 - G 82 -7.5 -4.53685 | AAACCATAAGCAAAA TTGTTGG TTTTT CCAACAA AGCATTGATCTGAAC Fphi_0684 723579 - 722071 - | membrane protein of unknown function Fphi_0685 725010 - 723691 - | ABC transporter, ATP-binding protein Fphi_0686 726836 - 725031 - | ABC-type anion transport system, duplicated permease component TERM 390 726320 - 726305 - G 71 -7.6 -3.57144 | TCTGCCATGCCGAAA GCTGAT ACAT ATCAGC AGCTTCAACTAGCTC TERM 391 726494 - 726484 - G 71 -5.4 -4.53602 | GTGATAGCAAAGAAA CCTA AAA TAGG AATAGACTGTAAAAT TERM 392 727102 - 727112 + G 71 -5.4 -4.62069 | TAATACTTGCCCATA CTGT GGC ACAG TTTTTAAAGTAGAAA Fphi_0687 726965 - 727132 + | hypothetical protein Fphi_0688 727774 - 727133 - | hypothetical protein Fphi_0689 728653 - 728234 - | hypothetical protein Fphi_0690 729042 - 728650 - | CrcB family protein Fphi_0691 729945 - 729043 - | hydroxymethylbilane synthase TERM 393 729107 - 729129 + g 72 -2.7 -5.27023 | AGTAATTTACCGAGC CTCATAGGA TCATC TCCTGTAAG TTTTCTTTTTAAGAT Fphi_0692 730610 - 729942 - | carboxylesterase TERM 394 730852 - 730836 - R 75 -7.3 -4.2573 | opp_overlap 730836 GAAAGAAGCCCAAAA CCATTGC TAT ACAATGG TTTAACGATCAAGAA Fphi_0693 732816 - 730942 - | ribonuclease II family protein TERM 395 731175 - 731197 + g 73 -7.8 -3.78329 | opp_overlap 731157 731161 731175 731174 731177 ATTTCCAATGAGAAT TAGAAAAACG CTC CGTTTGTCTA TTTGACTTAATAGGA TERM 396 731610 - 731627 + g 77 -5.7 -4.96848 | TTAGCTTGACATTCT TATCATT ATCT AATGATA TTTTTATCTCAGGAA TERM 397 732359 - 732344 - G 72 -6.2 -4.4261 | TCTTCAACATTAAAA GTCTTA TTAT TAAGAC GCTCTATGAAATCAT Fphi_0694 732874 - 733671 + | glycosyl transferase Fphi_0695 735520 - 733751 - | aspartyl-tRNA synthetase TERM 398 734812 - 734793 - G 88 -7.2 -4.87592 | GTAGACATAATAAAA GCTTCATC TATA AATGAAGC CTCGATATCTATCTG Fphi_0696 735751 - 737271 + | nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Fphi_0697 738639 - 737359 - | major facilitator transporter Fphi_0698 739752 - 738682 - | betaine-homocysteine methyltransferase TERM 399 739217 - 739230 + g 70 -2.3 -5.32565 | overlap 739218 GCTATTGTTAAAACT GCTGG TAAG CCAGA TTTTTTGATTACTTC TERM 400 739866 - 739824 - R 71 -7.2 -3.83042 | opp_overlap 739826 739839 739865, overlap 739865 TTATTTAAAAATTAA GGCTTTTTTGGAAAGGTTTT AGA AAAACTATTTCAAAAAAACC ATCTGCAAAAGCGGA TERM 401 739884 - 739865 - R 95 -7.8 -5.44721 | opp_overlap 739865, overlap 739824 ACTATTTCAAAAAAA CCATCTGC AAAA GCGGATGG TCTATAAATGAATAT TERM 402 739865 - 739884 + r 80 -10 -2.92091 | opp_overlap 739824 739865 ACTATTTCAAAAAAA CCATCTGC AAAA GCGGATGG TCTATAAATGAATAT Fphi_0699 741490 - 740057 - | succinate semialdehyde dehydrogenase (NAD(P)+ dependent) Fphi_0700 743602 - 741506 - | phosphate acetyltransferase TERM 403 742628 - 742649 + g 77 -3.1 -5.55769 | AATACTTGCAAGTTT TAAAATTGT ATTT ACACTTTTA TTTTTTGTTGTCAGA TERM 404 743635 - 743650 + r 70 -7.6 -3.45634 | AATTTTGTGTTTCTT GAGCTA TCAT TAGCTC TTCATTAGTTGCAAT Fphi_0701 744766 - 743612 - | propionate kinase 2 / acetate kinase A TERM 405 743893 - 743905 + g 76 -7.7 -3.90328 | opp_overlap 743892, overlap 743892 743890 AAAATATTTCAATAG CTAGC TTA GCTAG TTTATCGCCATTATC Fphi_0702 745355 - 744867 - | single-strand DNA binding protein Fphi_0703 745971 - 745435 - | regulatory protein RecX Fphi_0704 746959 - 745877 - | calcium-transporting ATPase Fphi_0705 747433 - 746984 - | preprotein translocase subunit SecB Fphi_0706 747888 - 747466 - | rhodanese-related sulfurtransferase Fphi_0707 748574 - 748035 - | outer membrane protein of unknown function Fphi_0708 749310 - 748666 - | S49 family serine peptidase Fphi_0709 750409 - 749486 - | integrase, catalytic region Fphi_0710 750723 - 751079 + | ferredoxin TERM 406 751642 - 751653 + G 77 -3 -5.42514 | ACATTAGGTGATGGT GTTT TTGG AAAC TTTTTTGATTTGTCA Fphi_0711 751240 - 752937 + | indolepyruvate decarboxylase Fphi_0712 754203 - 752953 - | Na+/H+ antiporter TERM 407 755185 - 755169 - g 73 -3.7 -5.1861 | opp_overlap 755171, overlap 755171 TCCACTACCAAAAAA CTCAAAA ACC TTTTGTG TATGCAAAATGGGCA Fphi_0713 754733 - 755803 + | pyrimidine reductase/pyrimidine deaminase TERM 408 756220 - 756189 - g 72 -6 -4.40037 | opp_overlap 756189, overlap 756183 756191 AAAGAATTACTAAAA TATCTAGTCACAAA AGGA TTTGTGACTATAGA TGGTATGAGCATAAC TERM 409 756218 - 756191 - g 79 -8.6 -3.78529 | opp_overlap 756189, overlap 756183 756189 AGAATTACTAAAATA TCTAGTCACAAA AGGA TTTGTGACTATA GATGGTATGAGCATA Fphi_0714 755796 - 756401 + | riboflavin synthase subunit alpha Fphi_0715 756394 - 757605 + | GTP cyclohydrolase II Fphi_0716 757609 - 758052 + | riboflavin synthase Fphi_0717 758056 - 758574 + | peptide deformylase Fphi_0718 758671 - 759615 + | hypothetical protein Fphi_0719 760723 - 759644 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 410 760753 - 760767 + r 81 -10 -3.06969 | overlap 760739 760755 ACCTTTCTGTAGTGA CAGCAC AGT GTGCTG TCTTAAGATAGATTA TERM 411 760808 - 760794 - R 74 -8.6 -3.29549 | overlap 760789 ATTAATATAAGTTAA CAGATC AAT GATCTG TCACTACAAATAGTA Fphi_0720 762621 - 760837 - | GTP-binding protein LepA Fphi_0721 762890 - 763162 + | 30S ribosomal protein S20 Fphi_0722 763250 - 763603 + | hypothetical protein Fphi_0723 764921 - 763605 - | hypothetical protein Fphi_0724 765311 - 764949 - | outer membrane lipoprotein Fphi_0725 765912 - 765316 - | phosphoheptose isomerase Fphi_0726 766094 - 768394 + | hypothetical protein Fphi_0727 769609 - 768458 - | drug:H+ antiporter-1 (DHA1) family protein TERM 412 769240 - 769218 - G 100 -12.2 -4.18161 | opp_overlap 769224, overlap 769224 GATAAAGTTGCAAAA GATAAAGCTA ATT TAGCTTTATC AGCAACAATTGAGTT Fphi_0728 769707 - 770609 + | LysR family transcriptional regulator Fphi_0730 770684 - 771697 + | hypothetical protein Fphi_0729 772362 - 771694 - | hypothetical protein Fphi_0731 772976 - 772362 - | methyltransferase GidB TERM 413 773038 - 773056 + H 76 -4.6 -5.26918 | overlap 773039 CTTTAAATGGTAGAG TTGGGATT TAA AATTCCAG TTTTTTATACAATCT Fphi_0733 773075 - 774280 + | hydroxy/aromatic amino acid permease (HAAAP) family protein Fphi_0732 774954 - 774277 - | hypothetical protein TERM 414 775301 - 775289 - H 74 -4.9 -5.01422 | GGACACAAAAATAAA GTATT ATC AATAC AGATATAAATATAAA Fphi_0734 775336 - 776001 + | nitroreductase Fphi_0735 776064 - 777011 + | LysR family transcriptional regulator Fphi_0736 777527 - 777015 - | cytochrome b561 family protein Fphi_0737 778606 - 777611 - | inorganic phosphate transporter (PiT) family protein Fphi_0738 779284 - 778628 - | hypothetical protein TERM 415 779473 - 779447 - H 72 -6.1 -4.4078 | opp_overlap 779447, overlap 779448 779467 CGCTTTTAATGAAAA CTTACTATTTT GAGAA AAAATAGTAAA GTACTATATAACAAG TERM 416 779479 - 779467 - H 77 -4.9 -5.252 | opp_overlap 779447, overlap 779448 779447 TATTTTGAGAAAAAA TAGTA AAG TACTA TATAACAAGAGCTCT Fphi_0739 779608 - 781143 + | phospholipase C TERM 417 781921 - 781934 + G 70 -2.4 -5.25803 | opp_overlap 781921 CAATCTTCGGTAATA TGGA CATATC TCCA TTTTTTATGACAGTT TERM 418 782549 - 782561 + G 73 -7.7 -3.73042 | opp_overlap 782514, overlap 782547 TCAATTCATAGCTTC TGCTC AAC GAGCA TATTTTGATAGCAAC Fphi_0740 781179 - 782666 + | hypothetical protein TERM 419 782960 - 782944 - g 76 -3.7 -5.31877 | overlap 782945 ATGTATTAGAAAAAA TGATTGA AAT TCAATCT AAAGTAGCTGACGAT TERM 420 782959 - 782945 - g 70 -7.2 -3.78042 | overlap 782944 TGTATTAGAAAAAAT GATTGA AAT TCAATC TAAAGTAGCTGACGA Fphi_0742 782682 - 783380 + | hypothetical protein Fphi_0741 783751 - 783377 - | diacylglycerol kinase TERM 421 783469 - 783459 - G 74 -6.8 -4.40526 | opp_overlap 783458 783459 GATACAAAAACCAAA GCAG AAC CTGC ATCTTTAGCTTGCTT Fphi_0743 785406 - 783757 - | sulfatase TERM 422 785159 - 785145 - G 88 -7.2 -5.14563 | opp_overlap 785145 TCTCGGAGTAAAAAA CAATTG CTC CAATTG TAATTAGAATAATCA Fphi_0744 786307 - 785483 - | allophanate hydrolase subunit 2 Fphi_0745 787010 - 786312 - | hypothetical protein Fphi_0746 787627 - 787010 - | allophanate hydrolase subunit 1 Fphi_0747 788889 - 787663 - | metabolite:H+ symporter (MHS) family protein TERM 423 788928 - 788951 + r 74 -4 -5.19916 | opp_overlap 788928, overlap 788936 788937 GATTCTTTAATTTAA GTATATTTTT CAAA AAAAATACAC TTTTTTGAGTCTTTT Fphi_0748 789853 - 789017 - | universal stress protein Fphi_0749 792666 - 789928 - | DNA/RNA helicase Fphi_0750 793434 - 792673 - | hypothetical protein Fphi_0751 794068 - 793499 - | hypothetical protein TERM 424 793716 - 793729 + g 74 -2.4 -5.40072 | overlap 793710 ATTATTTTTTCTAGA CCAT CTGGGT ATGG TTTTTTTGCAACACC Fphi_0752 794146 - 794898 + | hypothetical protein Fphi_0753 795782 - 794916 - | SAM-dependent methyltransferase TERM 425 795112 - 795079 - G 87 -11.3 -3.17051 | overlap 795077 CTTTGATCACTAATA TCATTGTTGTTATTA CAAT CAATAACAACAACGA ACTCTCCTCTTATAA Fphi_0754 797133 - 795775 - | UDP-N-acetylmuramate-alanine ligase Fphi_0755 797979 - 797203 - | shikimate 5-dehydrogenase Fphi_0756 798101 - 798559 + | hypothetical protein Fphi_0757 798651 - 798785 + | 50S ribosomal protein L34 Fphi_0758 798775 - 799128 + | ribonuclease P protein component Fphi_0759 799080 - 799364 + | hypothetical protein Fphi_0760 799361 - 801016 + | membrane protein of unknown function Fphi_0761 801018 - 801920 + | acyltransferase TERM 426 802538 - 802520 - g 70 -4 -4.84527 | overlap 802521 TCTAGACAGTAAAAA CTTAATAA GTG TTATTAAA AGCTTAAAAAGAGGC Fphi_0762 801981 - 802904 + | LPS fatty acid acyltransferase TERM 427 803063 - 803087 + G 81 -8 -4.15854 | gap 1, opp_overlap 803053, overlap 803065 CAACAGCTGAGCTAC TT-TCAGCAGC AAGT GCTGCTGATAA TTTTGAGATCCGTTT TERM 428 803065 - 803084 + G 85 -12.2 -3.09831 | opp_overlap 803053, overlap 803063 ACAGCTGAGCTACTT TCAGCAGC AAGT GCTGCTGA TAATTTTGAGATCCG Fphi_0763 802882 - 803331 + | type IV pili, pilus assembly protein Fphi_0764 803364 - 803933 + | elongation factor P Fphi_0765 803938 - 804474 + | oligoribonuclease Fphi_0766 804602 - 804901 + | hypothetical protein TERM 429 805357 - 805377 + G 71 -7.6 -3.52668 | CAGGCAAAACTTTTG GTGGTGGA AGTAA TCCACTAC TTGTATCCGTGCGTT TERM 430 805710 - 805680 - g 71 -6.3 -4.08689 | gap 1, opp_overlap 805682, overlap 805672 AAGAAAATCTACAAA GATCTAGTTGGCAA AGAA TTTCCAAC-AGATC CTGTCGAGCAACTTT TERM 431 806081 - 806103 + G 81 -7.8 -4.30576 | TATGCAAGATATGGA GTTTACTATC GAA GATGGTAAGC TTTTCATGCTACAAA Fphi_0767 805116 - 807749 + | pyruvate phosphate dikinase Fphi_0768 808143 - 809030 + | branched-chain amino acid aminotransferase protein (class IV) TERM 432 809233 - 809206 - g 77 -9.4 -3.15548 | overlap 809214 AGCAAGTAATACAGA TTTTGAAATAGT AAAT ACTATCTCAAAA AGAATGGCTGAGAAA Fphi_0769 809042 - 810622 + | 2-isopropylmalate synthase Fphi_0770 810624 - 812033 + | isopropylmalate isomerase large subunit Fphi_0771 812036 - 812605 + | 3-isopropylmalate dehydratase Fphi_0772 812607 - 813686 + | 3-isopropylmalate dehydrogenase Fphi_0773 815043 - 813700 - | alkaline phosphatase TERM 433 813753 - 813737 - G 72 -9.5 -2.62184 | opp_overlap 813728 TTCTTGGCTATACTA GTAGCTA ATC TAGCTAC CAAAGCATATAAGAT TERM 434 814380 - 814390 + g 73 -4 -5.12617 | GTATTTTTTCTTTTT TACT CGA AGTA TTTTTTGCGTCATTC TERM 435 814507 - 814541 + g 89 -3.1 -5.9218 | gap 1, opp_overlap 814509, overlap 814509 TATTTGTAACAAACA T-ACCAATGAGACTAG AGCT TTAGTTTTATTGGTTA TTTTTTTATTCTCTA TERM 436 814509 - 814538 + g 88 -7.3 -4.98468 | opp_overlap 814509, overlap 814507 TTTGTAACAAACATA CCAATGAGACTAG AGCT TTAGTTTTATTGG TTATTTTTTTATTCT TERM 437 816782 - 816766 - gH 76 -3.7 -5.37345 | opp_overlap 816769 GTTAACTATAAAAAA TAACTTC TCG GAGGTTA TGACAGAGGCTTCTA Fphi_0774 815285 - 817000 + | beta-fructofuranosidase Fphi_0776 816975 - 818255 + | major facilitator superfamily (MFS) transporter family protein Fphi_0775 819645 - 818230 - | hypothetical protein Fphi_0777 819738 - 820175 + | D-tyrosyl-tRNA deacylase TERM 438 820741 - 820728 - g 79 -5.3 -5.1287 | TTGATATTCAAAAAA TGCTA AAGC TAGCA AGCCCCGTATATAAA Fphi_0779 820178 - 821017 + | prephenate dehydrogenase Fphi_0778 821481 - 821008 - | hypothetical protein Fphi_0780 822225 - 821485 - | dihydroorotate oxidase Fphi_0781 822859 - 822227 - | orotidine-5'-phosphate decarboxylase TERM 439 822933 - 822943 + H 77 -5.4 -5.07275 | TAGTAAACTATATTT TGAG CTT CTCA TTTTTATCTATGTCA TERM 440 823738 - 823750 + G 71 -6.3 -4.14392 | overlap 823745 TTTAAGGCATCTTGG TCTTG CAG CAAGA TTTGTATCTGGCTAT TERM 441 824805 - 824792 - g 74 -5.3 -4.70659 | opp_overlap 824792 GTCGAGATTGAAAAA TCTGT CGAA ACAGA CTTGTTTGCATCATA Fphi_0782 823154 - 826528 + | hypothetical protein Fphi_0783 827108 - 826566 - | hypothetical protein TERM 442 826733 - 826745 + g 74 -3.4 -5.30189 | opp_overlap 826733 TTATTGCCGGATAGA GTTG TTCAT CAAC TTTTTTAATCTTGTC TERM 443 827518 - 827504 - g 85 -8.6 -4.23853 | AACAAGATATACAAA TGACAG CTC CTGTCA AAATAGAACAATCTT TERM 444 827790 - 827767 - g 71 -5.3 -4.49781 | AAAACATGGATAAAA GCCAACCAT TACGAG ATAGTCGGC CAACCAGAGGCAGCT Fphi_0784 827248 - 827871 + | hypothetical protein Fphi_0785 828774 - 827881 - | LysR family transcriptional regulator TERM 445 828427 - 828413 - G 72 -2.8 -5.252 | overlap 828400 TATTTTGATAAAAAA TTAGCA AAA TGCTCA ATAAAAAAAGCCACA Fphi_0786 828871 - 829278 + | hypothetical protein TERM 446 829382 - 829402 + G 79 -4.2 -5.27206 | AATTAATGGCTGCTG TAATAATA TTATT TATTATTA TTTTTATTATATGTA TERM 447 829675 - 829660 - g 76 -4 -5.35224 | overlap 829661 CTTATAAAAATAAAA CTTGCT GAAA AGCAAA GAGATTTAGCCAGAG TERM 448 829871 - 829847 - g 70 -4.4 -4.79756 | TAGATAACCTAAAAA TCAGACAAAA TGATC TTCTATCTGA TGAGAAAATAACTCA Fphi_0787 829354 - 830319 + | HlyD family membrane fusion protein TERM 449 830749 - 830765 + G 93 -9.5 -4.4017 | opp_overlap 830748 830747 AGAGTATAGAATACT CACCAAT ATT ATTGGTG TTTTATGCGCCTTAA Fphi_0788 830306 - 831370 + | hypothetical protein Fphi_0789 832359 - 831415 - | integrase, catalytic region Fphi_0790 832521 - 834017 + | GDSL-like lipolytic enzyme Fphi_1914 834683 - 834916 + | hypothetical protein Fphi_0791 835039 - 836256 + | hypothetical protein TERM 450 836527 - 836515 - g 72 -2.7 -5.34365 | overlap 836516 TTAGAACAACAAAAA CTATC AAA GATAA TAAAACAATAGCTAA Fphi_0792 836421 - 837095 + | hypothetical protein TERM 451 837521 - 837508 - g 82 -5.3 -5.36018 | ATTAAAAAAAATAAA CTCTA CTAA TAGAG ATCTTCATGGAGATG Fphi_0793 837332 - 838135 + | hypothetical protein Fphi_0794 839587 - 838352 - | Signal transduction histidine kinase-like protein TERM 452 839156 - 839138 - G 82 -3 -5.60993 | overlap 839140 CTCTCGACAAAAAAA CAGCCCTG TCC CCGAGCTA CCATTTAAAGAGTAG TERM 453 839464 - 839474 + g 72 -2.6 -5.33405 | TTAGATTCTCTGTAC TAAT TCC ATTA TTTTTATTTGATAGA Fphi_0795 840317 - 839718 - | hypothetical protein TERM 454 839926 - 839898 - G 79 -10.5 -2.84459 | opp_overlap 839896 839895 839898, overlap 839905 AACATCATCACTATA GCTCAAATCATAT GAA ATATAATTCGAGC TACTTTCTCCAATAT Fphi_0796 841341 - 840319 - | hypothetical protein TERM 455 840726 - 840748 + g 70 -3.6 -4.91511 | opp_overlap 840729, overlap 840729 CATTTTCATAACCAT TAATATAATT CTG AATTATAATA TTTTTATAGTCGAAT Fphi_0797 841943 - 841347 - | response regulator receiver protein Fphi_0798 842097 - 842492 + | integrase, catalytic region Fphi_0799 842577 - 843041 + | integrase, catalytic region Fphi_0800 846036 - 843466 - | hypothetical protein TERM 456 847412 - 847428 + G 70 -7.3 -3.78736 | TAAAGAAAATATTAG CTAAGCA AAT TGCTTGG TTTGATGAGTATGTA Fphi_0801 846577 - 847449 + | alpha/beta fold family hydrolase TERM 457 847595 - 847575 - T 100 -14.1 -2.54896 | overlap 847571 TTGCTACGCAAGCCA CCCCTTCAA TAT TTGAAGGGG AATATGCACATTAAT TERM 458 847688 - 847676 - T 70 -6.3 -4.08767 | TGTATGTCGCTAAAA CTTAC GCA GTAAG TGGCGAAACTATTAC Fphi_0802 849050 - 847704 - | dihydroorotase Fphi_0803 849304 - 849975 + | thiopurine S-methyltransferase Fphi_0804 851085 - 849982 - | acid phosphatase Fphi_0805 851744 - 852910 + | carbamoyl phosphate synthase small subunit Fphi_0806 852915 - 856199 + | carbamoyl phosphate synthase large subunit TERM 459 856209 - 856229 + F 78 -9.8 -2.69912 | overlap 856204 AGTTAAAGTGTGTCA TCCTATGG CTTAA CCATAGGA TCCATTGCTTTTTTA Fphi_0807 856350 - 857276 + | aspartate carbamoyltransferase TERM 460 857529 - 857547 + G 85 -4.6 -5.61881 | opp_overlap 857529 857533 ATTTCAGGAATTATA CCAATACT TGT AGTATTAG TTTTTATTTTTCCAA Fphi_0808 857424 - 858647 + | serine permease TERM 461 858808 - 858791 - f 70 -6.3 -4.10178 | TAATAACAGTACAAA TGCCAAT AATA ACTGGCA ACAAAAAAGCAAACC TERM 462 858837 - 858817 - f 82 -5.3 -5.45652 | overlap 858822 ACTGGCAACAAAAAA GCAAACCGC GTA GCGGCTAAC GACAGCAACTTTGCT TERM 463 858832 - 858822 - f 82 -8.2 -4.51301 | overlap 858817 CAACAAAAAAGCAAA CCGC GTA GCGG CTAACGACAGCAACT TERM 464 858856 - 858840 - f 70 -8.7 -2.71731 | opp_overlap 858840, overlap 858842 CGTAGCGGCTAACGA CAGCAAC TTT GCTGCTG TTGCTAAAGCTGCCT Fphi_0809 859823 - 860767 + | integrase, catalytic region Fphi_0810 860834 - 861040 + | hypothetical protein Fphi_0811 861065 - 861544 + | bacterioferritin comigratory protein TERM 465 861729 - 861756 + F 76 -8.6 -3.61654 | gap 1, overlap 861731 861731 CTAACAATTTTTATG TAG-TGACAGATC ATT GATCTGTCAGCTG TTTGCCATAACTATA TERM 466 861731 - 861754 + F 79 -9 -3.38522 | gap 1, overlap 861729 861731 AACAATTTTTATGTA G-TGACAGATC ATT GATCTGTCAGC TGTTTGCCATAACTA TERM 467 861731 - 861753 + F 73 -9.2 -2.62792 | overlap 861731 861729 AACAATTTTTATGTA GTGACAGATC ATT GATCTGTCAG CTGTTTGCCATAACT TERM 468 861794 - 861776 - f 100 -13.2 -3.91357 | opp_overlap 861786 CCATAACTATAATAA GACAGCAC ACT GTGCTGTC ACTACAGCAAATTTA TERM 469 863764 - 863782 + G 71 -7.5 -3.6003 | opp_overlap 863764 863762 863757 TTCAAACATTCAATA TGATACC AAATC GGTATCA TTTAAAACTAATTTA TERM 470 863782 - 863764 - g 70 -8.2 -3.182 | opp_overlap 863764, overlap 863762 863757 TTCAAACATTCAATA TGATACCA AAT CGGTATCA TTTAAAACTAATTTA Fphi_0812 861851 - 864106 + | hydrogenase maturation protein HypF Fphi_0813 864108 - 864323 + | hydrogenase expression/formation protein (HUPF/HYPC) Fphi_0814 864336 - 865427 + | hydrogenase expression/formation protein HypD TERM 471 865600 - 865587 - g 74 -6.7 -4.44448 | ACTACCGCAAATAAA TGGCA AAAT TGCCA TGACAACAGATAGTT Fphi_0815 865429 - 866454 + | hydrogenase expression/formation protein HypE TERM 472 867340 - 867358 + G 81 -8.2 -4.08887 | opp_overlap 867339 AGAAAGTGAACATAC GCGTGAAT GGG ATTCATGC TTTGGTTTAGATCAT Fphi_0816 866465 - 867565 + | cytochrome c3 hydrogenase alpha (or beta) chain Fphi_0817 867568 - 868419 + | hydrogenase/sulfur reductase gamma subunit Fphi_0818 868422 - 869228 + | hypothetical protein Fphi_0819 869231 - 870526 + | hypothetical protein TERM 473 870543 - 870553 + F 76 -4 -5.38497 | opp_overlap 870537 CACGATCAATCATCA TATG ATA CATA TTTTTTAATTTAGCT Fphi_0820 870649 - 871578 + | high-affinity nickel-transporter Fphi_0821 871642 - 872106 + | hypothetical protein Fphi_0822 872505 - 872116 - | hypothetical protein Fphi_0823 874272 - 872593 - | putative ABC transporter ATP-binding protein Fphi_0824 874485 - 875705 + | metabolite:H+ symporter (MHS) family protein Fphi_0825 875933 - 875721 - | hypothetical protein TERM 474 877239 - 877249 + G 71 -6.8 -4.10161 | AAGTTAGTTCACTAT GCCA AGG TGGC TTTTGAGAAATACTA Fphi_0826 876081 - 877367 + | sulfide-quinone reductase TERM 475 877495 - 877466 - g 80 -6.7 -4.66388 | gap 1, overlap 877482 AAAAGCATAAAGAAA GTTTTCCTAAAGAC CAT GT-TTTAGAAAAAC AACAAGCTTTAGAAC Fphi_0827 877348 - 878301 + | hypothetical protein TERM 476 878288 - 878301 + T 74 -3.9 -5.2853 | overlap 878283 TAAAAATTGGTGAGA CTATA AATA TATAG TTTTATTTTTAGATA Fphi_0828 879314 - 878310 - | drug/metabolite transporter (DMT) superfamily protein Fphi_0829 880251 - 879331 - | ribokinase TERM 477 880733 - 880718 - H 76 -4 -5.48825 | gap 1, overlap 880720 TATTATCCAAAAAAA GAGATCC ATC GGATC-C AAATGCAGAATGGCT TERM 478 880732 - 880720 - H 78 -7.7 -4.37763 | overlap 880718 TTATCCAAAAAAAGA GATCC ATC GGATC CAAATGCAGAATGGC TERM 479 881222 - 881205 - g 71 -3.5 -5.12617 | overlap 881206 TAAGTACTTAAAAAA CTATGAA TCAC TTCATAA AGCCAATGTACTAAG TERM 480 881514 - 881504 - g 76 -4 -5.28778 | opp_overlap 881504 ATCAGTTACAAAAAA CTTT TAA AAAG TACTTTCATTATGAA Fphi_0830 880789 - 881565 + | hypothetical protein Fphi_0831 881883 - 882143 + | hypothetical protein Fphi_1915 882146 - 882385 + | hypothetical protein TERM 481 882648 - 882666 + G 71 -7.5 -3.68704 | opp_overlap 882648 882647 ACCTTTAGGATTAAC TGTTGCA ATATC TGCAACA TTATTAACATCTTGT Fphi_0832 882622 - 884859 + | hypothetical protein Fphi_0833 887471 - 884895 - | aminopeptidase N TERM 482 887263 - 887288 + g 78 -7.1 -4.36127 | opp_overlap 887286, overlap 887264 887286 GTATTTGATAGCTCT TTATTATCTAT TTTT ATAGATAATAG TTTTAGATTATTACC TERM 483 887264 - 887287 + g 70 -8.4 -3.20953 | opp_overlap 887286, overlap 887263 887286 TATTTGATAGCTCTT TATTATCTAT TTTT ATAGATAATA GTTTTAGATTATTAC Fphi_0834 888956 - 887595 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 484 888136 - 888146 + g 74 -5.4 -4.66264 | overlap 888122 CCATATACCGCTCCT GCAT TAT ATGC TTTTTGCGCATTTTC TERM 485 888764 - 888788 + g 71 -3 -5.07567 | gap 2, opp_overlap 888770, overlap 888769 888770 GATCAAATTTTTTAC GGATAACTCCTT TAG AAGGAG--ATCC TTTTTTACACTCTAG TERM 486 888784 - 888770 - G 75 -8.6 -3.35798 | opp_overlap 888770 888769 888764 ATTTTTTACGGATAA CTCCTT TAG AAGGAG ATCCTTTTTTACACT Fphi_0835 889462 - 889049 - | hypothetical protein Fphi_0836 890165 - 889467 - | peptide methionine sulfoxide reductase Fphi_0837 891237 - 890230 - | anthranilate phosphoribosyltransferase TERM 487 890617 - 890633 + g 77 -9.5 -3.29187 | opp_overlap 890615 AAGATTAATTAGAGT TTTTGCC ATT GGCAAAA TTAAATCTTTTGAGT TERM 488 890931 - 890951 + g 86 -11.1 -3.33315 | opp_overlap 890927 890925 890924, overlap 890933 CTTTATAACCAGCTG CCGCTGCGA CAA TCGCAGCTG TTGTAGAAATATTAA TERM 489 890933 - 890949 + g 91 -12.3 -3.23219 | opp_overlap 890927 890925 890924, overlap 890931 TTATAACCAGCTGCC GCTGCGA CAA TCGCAGC TGTTGTAGAAATATT Fphi_0838 891812 - 891234 - | anthranilate synthase component II TERM 490 891633 - 891618 - G 71 -9 -3.03212 | AAGATCAACTATACA TCCTGC ACTT GCAGGA TTGCCAGGACCAGGC Fphi_0839 893360 - 891816 - | anthranilate synthase component I Fphi_0840 893648 - 893361 - | putative Trp operon repressor TERM 491 893703 - 893656 - R 77 -3 -5.66684 | opp_overlap 893646 893674, overlap 893648 893659 893661 GAATTCATAAAAAAA TAATTTTTAATGTAATTTTGTA ATGG TACATCATTACATTAAACATAA CAACTTATATTTATA TERM 492 893700 - 893659 - R 72 -4.7 -4.89054 | opp_overlap 893646 893674, overlap 893648 893656 893661 TTCATAAAAAAATAA TTTTTAATGTAATTTTGTA ATGG TACATCATTACATTAAACA TAACAACTTATATTT Fphi_0841 895632 - 894103 - | ribonuclease G TERM 493 895633 - 895658 + H 80 -5.7 -5.10004 | CTTATTAACATCCAT TATAAAGAAAA AATT TTTTTTTTATA TTTTTGATTATTTTT TERM 494 896324 - 896313 - g 77 -3 -5.46657 | opp_overlap 896315 896315, overlap 896314 896315 TATTCTAATAAAAAA TTCT CTGG AGAA AAATCTCCAGAAGTT TERM 495 896336 - 896315 - g 73 -9.5 -2.91061 | opp_overlap 896315 896315 896332, overlap 896313 896314 TTCTAATAAAAAATT CTCTGGAGA AAAA TCTCCAGAA GTTACTTCAGTTGGT TERM 496 897292 - 897280 - g 72 -2.7 -5.34208 | AAAAAAAAGTAAAAA TAGAT AAT ATCCA AAAGGTTGTTGCTGA Fphi_0842 896082 - 897557 + | chromosomal replication initiator protein DnaA Fphi_0843 897595 - 898698 + | DNA-directed DNA polymerase Fphi_0844 899848 - 898700 - | hypothetical protein Fphi_0845 900006 - 901535 + | aspartate/glutamate transporter TERM 497 901546 - 901513 - T 71 -2.7 -5.42514 | gap 1, overlap 901536 TGATAAATCAAAAAA GTTATACAAACATTAA AAA TTAAGGCTT-TATAAC CTTTATATTAAACTC Fphi_0846 902889 - 901945 - | integrase, catalytic region Fphi_0847 903561 - 902983 - | hypothetical protein TERM 498 903061 - 903073 + g 83 -6.3 -4.90525 | opp_overlap 903061, overlap 903064 AGAGATCCTTAATAA TGAGA AAG TCTCA TTTTCTTTCAAATTA Fphi_0848 904317 - 903610 - | hydrogenase accessory protein HypB Fphi_0849 904666 - 904328 - | hydrogenase nickel insertion protein HypA Fphi_0850 906065 - 904803 - | metabolite:H+ symporter (MHS) family protein Fphi_0851 907027 - 906245 - | fkbp-type peptidyl-prolyl cis-trans isomerase family protein Fphi_0852 907166 - 908110 + | integrase, catalytic region Fphi_0853 908672 - 908157 - | B-type cytochrome Fphi_0854 909218 - 908733 - | Rieske (2Fe-2S) domain-containing protein TERM 499 908851 - 908863 + g 72 -4.9 -4.73613 | overlap 908848 ACAACTCTTTTATCT TCATT AAG AATGA TTTTATTGGTGATAC Fphi_0855 910679 - 910233 - | Rieske (2Fe-2S) domain-containing protein Fphi_0856 909345 - 910289 + | integrase, catalytic region Fphi_0857 910770 - 911918 + | Na+:H+ antiporter Fphi_0858 911982 - 912701 + | hypothetical protein Fphi_0859 913450 - 912710 - | acyltransferase TERM 500 913101 - 913111 + g 77 -5.4 -4.94902 | AATATGTTTGTCTTA CCAA ATA TTGG TTTTTCTAGTAATTC TERM 501 913386 - 913376 - G 73 -4 -5.02606 | opp_overlap 913376 TAGCAAACAAGAAAA TAGT AGA ACTA TATATCCGTATACCT Fphi_0860 914218 - 913466 - | acyltransferase TERM 502 913864 - 913879 + g 71 -3.2 -5.1861 | CCGTACCAAAGATTG GAGCAT CAAA AAGCTC TTTTTTCATAATAAA Fphi_0861 914702 - 914379 - | 4Fe-4S ferredoxin Fphi_0862 914906 - 915562 + | hypothetical protein Fphi_0863 916763 - 915606 - | phosphoribosylglycinamide formyltransferase 2 Fphi_0864 919072 - 916850 - | chitinase TERM 503 919032 - 919058 + g 88 -7.5 -4.99861 | CTCGTAGCTCCACAT GCTGTTAATAA AGCGC TTATTAATAGC TTTTTATAGTTCATA Fphi_0865 921802 - 919223 - | chaperone ClpB TERM 504 921172 - 921203 + g 71 -3.1 -5.03201 | opp_overlap 921177 CAATAGCAGTTTTAC CAACACCTG-GCTCA CCTA TAAGCACAGG-GTTG TTTTTAGTTCTTCTT TERM 505 922485 - 922513 + G 100 -9.7 -4.54821 | GGGTTGGTCGCAGAT GCTATTGTTGAAG TTA CTTCAATTATAGC TTTTATACTTACAGT Fphi_0867 922017 - 922733 + | nicotinamide ribonucleoside (NR) uptake permease (PnuC) family protein Fphi_0866 923539 - 922730 - | tryptophan synthase subunit alpha TERM 506 923259 - 923277 + g 73 -4.6 -4.84761 | AAGCCAATGGGGATA TGAGGGTA TTT TACTCTTA TTTTTGTGAGGATAT Fphi_0868 924732 - 923542 - | tryptophan synthase subunit beta Fphi_0869 926324 - 924819 - | carboxypeptidase Taq TERM 507 925200 - 925220 + gr 76 -4.1 -5.19879 | overlap 925188 TAGCTCGCTAACATC GAGATTTTT TTC AAAGATTTC TTTTTCTATTTCAAA Fphi_0870 927654 - 926260 - | chloride channel protein Fphi_0871 928115 - 927756 - | hypothetical protein Fphi_0872 928559 - 928149 - | hypothetical protein Fphi_0873 928969 - 928577 - | hypothetical protein TERM 508 929517 - 929534 + G 74 -5.6 -4.72373 | ATATGGATGGTTTTA CAAGTG TGGCAT CACTTG TTTGTGTTTTTTTAG Fphi_0874 929159 - 929716 + | nicotinamide ribonucleoside (NR) uptake permease (PnuC) family protein Fphi_0875 929717 - 930463 + | Mg-dependent DNase Fphi_0876 930539 - 931477 + | prolyl aminopeptidase TERM 509 931566 - 931541 - f 88 -5.5 -5.63504 | gap 1, opp_overlap 931543, overlap 931543 931545 AACTTCATAAAAAAA CATCGACTCTGC GTT GCAGAATCAA-G TTCTAATTAGTAGTT TERM 510 931565 - 931543 - f 88 -9.2 -4.45201 | opp_overlap 931543, overlap 931541 931545 CTTCATAAAAAAACA TCGACTCTGC GTT GCAGAATCAA GTTCTAATTAGTAGT TERM 511 931563 - 931545 - f 75 -9.6 -2.54537 | opp_overlap 931543, overlap 931543 931541 TCATAAAAAAACATC GACTCTGC GTT GCAGAATC AAGTTCTAATTAGTA Fphi_0877 931921 - 933276 + | aspartate kinase Fphi_0878 933288 - 933959 + | dihydrodipicolinate reductase Fphi_0879 933950 - 934837 + | dihydrodipicolinate synthase Fphi_0880 934862 - 935611 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 512 935920 - 935940 + G 75 -4.7 -4.91109 | CTCAACTAGAATATT TTCTAGCTC AAG GCGTTAGAA TTTTTGTAATCGAGA Fphi_0881 935616 - 936827 + | pyridoxal-dependent decarboxylase Fphi_0882 936846 - 938036 + | aspartate aminotransferase TERM 513 939408 - 939428 + F 70 -7.6 -3.3676 | gap 1, opp_overlap 939395, overlap 939392 CAGTGACAGGTGCTG CACG-GCTG TCGT CAGCTCGTG TTGTGAAATGTTGGG TERM 514 939876 - 939857 - f 73 -9.2 -2.65808 | opp_overlap 939863, overlap 939854 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATCACCTCCTTA TERM 515 940692 - 940680 - f 77 -7.7 -4.2354 | GAAAGGTGAAAAGAA CCCTT ATA AAGGG AGTGAAATAGAATCT TERM 516 940729 - 940712 - f 73 -7.7 -3.72485 | AAATAGAATCTGAAA CCGCTTG CATA CAAGCAG TAGGAGCATTATTTA TERM 517 943289 - 943321 + F 88 -9.4 -4.1347 | gap 1, opp_overlap 943289 943295, overlap 943295 TCGTGATAAGCAATA CA-AAAAGCCTCATA GAAA TATGGGGCTTTTGTG TTTATATGCTTACCA TERM 518 943295 - 943314 + F 95 -8.6 -4.87328 | opp_overlap 943295 943289, overlap 943289 TAAGCAATACAAAAA GCCTCATA GAAA TATGGGGC TTTTGTGTTTATATG TERM 519 943314 - 943295 - f 82 -6.4 -5.1485 | opp_overlap 943289 943295, overlap 943289 TAAGCAATACAAAAA GCCTCATA GAAA TATGGGGC TTTTGTGTTTATATG TERM 520 943470 - 943451 - g 70 -3.6 -5.00616 | opp_overlap 943454, overlap 943454 TGTTTGTGCAAAAAA GAATTCCA ACTA TGGAATTA TCTAAAGAGCAAAGA TERM 521 943467 - 943454 - g 71 -5.3 -4.61482 | opp_overlap 943454, overlap 943451 TTGTGCAAAAAAGAA TTCCA ACTA TGGAA TTATCTAAAGAGCAA Fphi_0883 943420 - 944814 + | sugar phosphate antiporter Fphi_0884 945402 - 944815 - | acyl carrier protein phosphodiesterase TERM 522 946650 - 946640 - g 70 -4 -4.84527 | opp_overlap 946640 TTTACATAGCAAAAA TATC CAA GATA TCTATGGGCAAGTTG Fphi_0885 945693 - 947411 + | potassium-transporting ATPase subunit A TERM 523 947472 - 947460 - g 71 -6.3 -4.1196 | AATTTATTGTCAAAA GAACT TGT AGTTC CGGCTATAAAGAAGT TERM 524 948634 - 948620 - g 77 -5.8 -4.70583 | overlap 948624 TTCATCAATAGAAAA TTATCT TAA AGATAA GCTTGATAAAGGCCT Fphi_0886 947424 - 949463 + | potassium-transporting ATPase B chain TERM 525 949810 - 949822 + G 70 -4.1 -4.7173 | GGTGTAAAGCCTATT CCAGA AGA TTTGG TTTTTGCATCTGGTA Fphi_0887 949480 - 950055 + | potassium-transporting ATPase Fphi_0888 950108 - 952798 + | two component sensor protein KdpD TERM 526 952839 - 952829 - g 93 -4 -6.00086 | ATATGATAAAAAAAA TACT AAT AGTA GAAGATGAACCTCAA Fphi_0890 952816 - 953502 + | response regulator receiver protein Fphi_0889 953945 - 953499 - | hypothetical protein Fphi_0891 954075 - 955268 + | tyrosine permease TERM 527 955626 - 955609 - g 71 -8.5 -3.09193 | opp_overlap 955608 955606 955609 955611, overlap 955611 955614 AGGATATGTATCTAA TAGTACC AGTT GGTACTA GTGTATTTGATCTTG Fphi_0892 955344 - 956348 + | GTPase ObgE TERM 528 956504 - 956527 + G 91 -11.8 -3.5882 | overlap 956506 956521 956525 AAGTTTTTATAGTTT TAGCTACAGC AGGT GCTGTAGCTG TTTCACAGTACTCTA TERM 529 956506 - 956525 + G 90 -12.2 -3.36991 | overlap 956504 956521 GTTTTTATAGTTTTA GCTACAGC AGGT GCTGTAGC TGTTTCACAGTACTC TERM 530 957016 - 957026 + G 71 -3.2 -5.06414 | TTGACAATAACACTA GTTC TTA GAGC TTTTTCTTCGGGAAG Fphi_0893 956356 - 958230 + | amino acid-polyamine-organocation (APC) superfamily protein TERM 531 959836 - 959801 - g 72 -2.9 -5.27938 | gap 1 ACTCTGAAAGAAAAA TATATG-AAATCCT ACAAGAAAA AGGATTTACATATA TCTCAACAAGTCATA Fphi_0895 958234 - 959904 + | ATP-binding cassette (ABC) superfamily protein Fphi_0894 961321 - 959894 - | Na+:H+ antiporter TERM 532 960158 - 960175 + g 71 -8.5 -3.12351 | opp_overlap 960157 AATTGCTGAAAGTAT GCCAATA ATTG TATTGGC TTGGGTGTGAGCAGA TERM 533 961405 - 961389 - H 72 -5.1 -4.88795 | opp_overlap 961389 AGTTAAGAAAATAAA CTAAGCT TTT AGCTTTG GTAGTACTACTATAC TERM 534 961772 - 961785 + G 77 -5.3 -4.98616 | overlap 961766 TTTTATGTGCAATCT CTCAA GATA TTGAG TTTTTGATATTTTCG Fphi_0896 961495 - 962679 + | drug:H+ antiporter-1 (DHA1) family protein Fphi_0897 963134 - 963808 + | hypothetical protein Fphi_0898 965178 - 963859 - | U32 family peptidase Fphi_0899 965583 - 965816 + | hypothetical protein Fphi_0900 966235 - 966855 + | protein-L-isoaspartate O-methyltransferase Fphi_0901 966907 - 968391 + | outer membrane efflux protein, TolC precursor TERM 535 968869 - 968839 - g 75 -4.8 -4.87893 | gap 1, opp_overlap 968842, overlap 968842 AAGCTCAAGTAAAAA GA-AGCTCTCTAG GTATTG CTAGAGGGCTGTC TGATGCGAACTTCAT TERM 536 968865 - 968842 - g 76 -6.7 -4.53777 | opp_overlap 968842, overlap 968839 CTCAAGTAAAAAGAA GCTCTCTAG GTATTG CTAGAGGGC TGTCTGATGCGAACT Fphi_0902 968400 - 969053 + | 4'-phosphopantetheinyl transferase family protein TERM 537 969911 - 969921 + G 70 -4 -4.90136 | TAAGAAATACTTACC TCAA GAT TTGA TTTTTAATGTTAATT Fphi_0903 969060 - 970400 + | glutamate decarboxylase Fphi_0904 970493 - 971983 + | amidophosphoribosyltransferase Fphi_0905 972382 - 975855 + | phosphoribosylformylglycinamidine synthase TERM 538 975949 - 975937 - f 70 -6.3 -4.20025 | opp_overlap 975936 AAGCTTCAAGAGAAA TCCTA TTA TAGGA AGTTATTTGTTAAAT Fphi_0906 976223 - 977167 + | integrase, catalytic region TERM 539 977511 - 977501 - g 71 -5.4 -4.57218 | overlap 977492 AGAATATAAGCAAAA GCTT AGT AAGC ATAAAGGTGATTTAT Fphi_0907 977151 - 977528 + | hypothetical protein TERM 540 977821 - 977790 - f 83 -8.8 -4.26076 | opp_overlap 977778 977776, overlap 977791 977816 TCATTCCTATGAAAA TGGGAATCTCTTAA ATGG TTGAGAGATTCCCG TGTCAAGCACGAGAG TERM 541 977820 - 977791 - f 95 -12.3 -3.15324 | opp_overlap 977778 977776, overlap 977790 977816 CATTCCTATGAAAAT GGGAATCTCTTAA ATGG TTGAGAGATTCCC GTGTCAAGCACGAGA TERM 542 977885 - 977860 - f 70 -5.5 -4.52589 | gap 1, opp_overlap 977861, overlap 977861 977862 TTTCTTGACACAAAA CCCCTCTTCATT AAC AACGAAG-GGGA ATTCTTATGATTACA TERM 543 978102 - 978090 - g 76 -7.7 -3.94634 | overlap 978080 TATCAGGGTAAAGAA TACCC TAT GGGTA ATCACGGACTTGCTC Fphi_0908 977892 - 978752 + | galactose mutarotase Fphi_0909 979579 - 978803 - | hypothetical protein Fphi_0910 980221 - 979586 - | hypothetical protein Fphi_0911 980518 - 981816 + | adenylosuccinate lyase Fphi_0912 981961 - 983526 + | putative ABC type bacteriocin/antibiotic exporter Fphi_0913 983538 - 984611 + | membrane fusion protein TERM 544 984620 - 984609 - f 71 -4.4 -4.82128 | CCATCAAATATAAAA TAGC AATA GCTA CACCTTTCTTTATGT Fphi_0914 984694 - 984975 + | Glu-tRNAGln amidotransferase C subunit Fphi_0915 984984 - 986429 + | glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit TERM 545 987215 - 987201 - g 73 -7.1 -4.08485 | CGGATGCAAATGAAA CACGC TCAAT GCGTG CAAAAGAGGATGCTT Fphi_0916 986444 - 987853 + | aspartyl/glutamyl-tRNA amidotransferase subunit B Fphi_0917 987868 - 988275 + | hypothetical protein Fphi_0918 989755 - 988286 - | GDSL-like lipolytic enzyme Fphi_0919 991315 - 989813 - | hypothetical protein Fphi_0920 992624 - 991413 - | putative transmembrane transport protein Fphi_0921 993010 - 992621 - | hypothetical protein Fphi_0922 995328 - 993007 - | IucA/IucC Fphi_0923 996664 - 995348 - | L-lysine 6-monooxygenase (NADPH) TERM 546 995561 - 995587 + g 73 -7.4 -3.71291 | overlap 995555 995559 TTTTAAAGACGTATT TTGCGTGATTAT TTT ATAATCACGAGA TATTTTGAGATTATT Fphi_0924 998370 - 996661 - | IucA/IucC TERM 547 997960 - 997978 + g 74 -6.8 -4.34402 | TCTTATTAAGTTTTG CTCATTTG TGA TAAATGAG TTTTCATATCCAAAG Fphi_0925 999878 - 998367 - | diaminobutyrate decarboxylase TERM 548 998484 - 998501 + g 71 -5.7 -4.54449 | TAAGGTGATTTTTAA GTAAATA TTCT TATTTAC TTTTGTCTGAGCTAT TERM 549 999274 - 999289 + g 72 -2.5 -5.38047 | overlap 999274 999275 ATTGATAGAGATTTG TGCAC AGAGAA GTGCG TTTTTTCTGTGCATA TERM 550 999320 - 999349 + g 71 -5.2 -4.61566 | gap 1 ATATACGAAATTTAT TAGCAGTATTTGG TAAAC CTAAAT-CTGCTA TTTTATGATTTAGAA Fphi_0926 1001209 - 999875 - | diaminobutyrate--2-oxoglutarate transaminase TERM 551 1000928 - 1000939 + g 74 -3 -5.24796 | ATTTAGTAGCTCTTC CATA AAGC TATG TTTTTCTTCTGTAAG TERM 552 1002136 - 1002107 - g 77 -9.5 -3.2594 | gap 1, overlap 1002105 AGTGGAACAAAAGTA TTTGTCGGG-TCAA CAT TTGATCCCAACAAA GGAGGAACTTATATT TERM 553 1002249 - 1002269 + G 76 -2.5 -5.39721 | opp_overlap 1002249 TTCAAGATAGAGATA TATCAGATG TGG CTCCTGATA TTTTTTCTCTGCTAA TERM 554 1002598 - 1002580 - g 72 -8.2 -3.42241 | opp_overlap 1002571 1002584, overlap 1002571 1002569 AACAGAGAGCGATAA CACTCTCT TGC AAAGAGTG TATGATGAAATTTTC Fphi_0927 1001291 - 1002622 + | aspartate kinase Fphi_0928 1003045 - 1002626 - | ferric uptake regulation protein Fphi_0929 1003271 - 1003669 + | NADH dehydrogenase I, A subunit Fphi_0930 1003660 - 1004136 + | NADH dehydrogenase subunit B Fphi_0931 1004139 - 1004786 + | NADH dehydrogenase Fphi_0932 1004805 - 1006058 + | NADH dehydrogenase subunit D Fphi_0933 1006068 - 1006556 + | NADH dehydrogenase I, E subunit Fphi_0934 1006563 - 1007837 + | NADH dehydrogenase (quinone) TERM 555 1008003 - 1007992 - g 73 -4.4 -4.91109 | TTGCTATCATAAAAA GCTA TCTG TAGC TGCTAATTGTAGGAT TERM 556 1008272 - 1008288 + G 73 -7.3 -3.95584 | opp_overlap 1008274 AAAAGAGCTGTTGAA GATCCTG AGC TAGGATC TTTGGTTGCTACCGA TERM 557 1009492 - 1009475 - g 75 -7.1 -4.1523 | TTTAGTACATATAAA TGTTTGA ATGG TCAAACA ACTACTAAGCTTTTA Fphi_0935 1007855 - 1010221 + | NADH dehydrogenase subunit G Fphi_0936 1010223 - 1011233 + | NADH dehydrogenase (quinone) TERM 558 1011671 - 1011658 - g 71 -5.3 -4.50583 | opp_overlap 1011653 1011658 1011656 AATATTATGACAAAA GCTAA GCTT TTAGC TATTGGTGATAAATA Fphi_0937 1011247 - 1011735 + | NADH dehydrogenase subunit I Fphi_0938 1011740 - 1012345 + | NADH dehydrogenase I, J subunit Fphi_0939 1012338 - 1012655 + | NADH dehydrogenase I, K subunit Fphi_0940 1012665 - 1014674 + | NADH dehydrogenase (quinone) TERM 559 1014733 - 1014751 + G 71 -5.2 -4.46073 | opp_overlap 1014730, overlap 1014730 1014737 AAGTTTAATAATTTG GCTTCCAA TAG TTGGTGGC TTTGTTGTATTAGCG Fphi_0941 1014695 - 1016284 + | NADH dehydrogenase (quinone) Fphi_0942 1016300 - 1017751 + | NADH dehydrogenase (quinone) Fphi_0943 1017827 - 1018021 + | hypothetical protein Fphi_0944 1018023 - 1019531 + | magnesium chelatase Fphi_0945 1019566 - 1020600 + | uroporphyrinogen decarboxylase TERM 560 1020772 - 1020758 - f 95 -11.4 -3.89346 | opp_overlap 1020758 TTTTTATTTTATAAA GGCCCT TCA AGGGCC TTTTTGCTATCTAGA TERM 561 1020758 - 1020772 + F 100 -11.4 -4.84527 | opp_overlap 1020758 TTTTTATTTTATAAA GGCCCT TCA AGGGCC TTTTTGCTATCTAGA Fphi_0946 1020814 - 1021266 + | hypothetical protein Fphi_0947 1021282 - 1022751 + | transcription elongation factor NusA TERM 562 1024387 - 1024377 - g 80 -6.8 -4.82901 | TCTCGTCTAGAAAAA GGAC GTG GTCC AGTTGCAACAGTACT TERM 563 1024609 - 1024596 - g 84 -5.3 -5.39755 | GAGAATGAGAAAAAA GCTAA AGAG TTAGC AGCTCAAAGATCTCA TERM 564 1024648 - 1024638 - g 74 -5.4 -4.67478 | CAAAGACAAAAAGAA GCTA AGA TAGC ACAAGAACAGTCTCT Fphi_0948 1022787 - 1025321 + | translation initiation factor IF-2 Fphi_0949 1025324 - 1025755 + | ribosome-binding factor A Fphi_0950 1025763 - 1027037 + | histidyl-tRNA synthetase Fphi_0951 1027034 - 1028332 + | major facilitator transporter Fphi_0952 1028332 - 1029399 + | hypothetical protein Fphi_0953 1029392 - 1030321 + | lysozyme TERM 565 1030308 - 1030332 + T 74 -8.1 -3.57715 | overlap 1030307 1030314 GGTTTGATGAGTTTG TTAAAACAGAA TAG TTTTGTTTTAA TCTTTACTGTCTTTT Fphi_0954 1031633 - 1030329 - | major facilitator transporter Fphi_0955 1031774 - 1032145 + | hypothetical protein Fphi_0956 1032200 - 1032991 + | F0F1 ATP synthase subunit A Fphi_0957 1033040 - 1033345 + | F0F1 ATP synthase subunit C Fphi_0958 1033391 - 1033861 + | F0F1 ATP synthase subunit B Fphi_0959 1033884 - 1034408 + | F0F1 ATP synthase subunit delta Fphi_0960 1034427 - 1035968 + | F0F1 ATP synthase subunit alpha Fphi_0961 1035983 - 1036879 + | F0F1 ATP synthase subunit gamma Fphi_0962 1036889 - 1038265 + | F0F1 ATP synthase subunit beta Fphi_0963 1038278 - 1038715 + | F0F1 ATP synthase subunit epsilon Fphi_0964 1038861 - 1041713 + | hypothetical protein Fphi_0965 1042060 - 1041731 - | glutaredoxin-related protein Fphi_0966 1042196 - 1042774 + | superoxide dismutase TERM 566 1042885 - 1042914 + T 72 -5.8 -4.5493 | opp_overlap 1042882 1042885, overlap 1042882 CAAGTCTTCAAATAA CTGCTGTTACAA AAAATA TTGTACTAGCAG TTCTTTTGTTTCCGT Fphi_0967 1044363 - 1042990 - | peptide-acetyl-coenzyme A transporter (PAT) family protein TERM 567 1044263 - 1044247 - G 73 -9.5 -2.83273 | CCAAAGCAGTAATGA TGATGCT GTA AGCATCA GAGGTAATCCAGAGG Fphi_0968 1045711 - 1044452 - | citrate (Si)-synthase TERM 568 1045207 - 1045227 + g 73 -6.9 -3.91164 | opp_overlap 1045209, overlap 1045201 1045205 AAGCCATAGCTGCAA TAGTTGCAA TCT TAGCAACTA TATTTTTAGCAACTT TERM 569 1045762 - 1045748 - H 75 -7.2 -4.20875 | GATCAAAAAATACAA TGCAAA AGG TTTGCA ATAAAAAGATACCTT TERM 570 1046223 - 1046238 + G 78 -7.6 -4.18762 | GGTCCAGATGGCTAT CAGCAA ACCG TTGCTG TTTTGACTGGAGGTT Fphi_0969 1046058 - 1046438 + | succinate dehydrogenase, cytochrome b556 Fphi_0970 1046429 - 1046782 + | succinate dehydrogenase hydrophobic membrane anchor protein TERM 571 1048532 - 1048518 - g 89 -8.6 -4.39426 | TAGATGGTGATAAAA CATCAC AAC GTGATG TAAATATGTCTCCTA Fphi_0971 1046795 - 1048588 + | succinate dehydrogenase Fphi_0972 1048605 - 1049306 + | succinate dehydrogenase iron-sulfur subunit Fphi_0973 1049336 - 1052140 + | alpha-ketoglutarate decarboxylase TERM 572 1052957 - 1052943 - g 72 -2.8 -5.27399 | opp_overlap 1052943 CAAGATACGAAAAAA GAGTTA AGA TGACTC GTTTACGTCAGACTA Fphi_0974 1052168 - 1053628 + | 2-oxoglutarate dehydrogenase complex, E2 component, dihydrolipoyltranssuccinase Fphi_0975 1053666 - 1054193 + | adenine phosphoribosyltransferase TERM 573 1054426 - 1054446 + G 73 -8.3 -3.543 | TTGATGTGATTGATT TAGGTGTAG TCC CGACACCTA TTGTAGCTTTTATGA TERM 574 1054751 - 1054772 + G 70 -8.1 -3.19389 | CTGTGCTAATGGTGC TGCTTCGAA TCAT TTTGAAGCA TTGCTAGATAGATTC Fphi_0976 1054197 - 1055534 + | phosphoglucosamine mutase Fphi_0977 1055537 - 1056298 + | Triose-phosphate isomerase Fphi_0978 1056286 - 1056624 + | preprotein translocase subunit SecG Fphi_0979 1057072 - 1058016 + | integrase, catalytic region Fphi_0980 1058187 - 1058687 + | hypothetical protein Fphi_1927 1058921 - 1059100 + | AlpA family regulatory protein Fphi_0981 1059104 - 1060027 + | hypothetical protein Fphi_0982 1060027 - 1061493 + | hypothetical protein Fphi_0983 1061726 - 1062028 + | hypothetical protein Fphi_0984 1062847 - 1062383 - | integrase, catalytic region Fphi_0985 1063328 - 1063032 - | putative transposase Fphi_0986 1063701 - 1064135 + | phage terminase, small subunit Fphi_0988 1064359 - 1064631 + | LysR family transcriptional regulator Fphi_0987 1065547 - 1064603 - | integrase, catalytic region Fphi_0989 1065754 - 1066359 + | LysR family transcriptional regulator TERM 575 1067211 - 1067201 - g 70 -4 -4.84363 | opp_overlap 1067201 TCAAAGTATTAAAAA GATA AAG TATC TCGTTGAGGATGACT Fphi_0990 1066500 - 1067453 + | LysR family transcriptional regulator Fphi_0992 1067530 - 1067979 + | hypothetical protein Fphi_0991 1069118 - 1067976 - | coproporphyrinogen dehydrogenase Fphi_0993 1069497 - 1069120 - | GtrA-like protein Fphi_0994 1069568 - 1070446 + | hypothetical protein Fphi_0995 1070551 - 1073355 + | aconitate hydratase TERM 576 1073398 - 1073430 + F 100 -12.3 -5.44638 | opp_overlap 1073404 TATTTTTTTTATTCT TTAATAGTGATAAAG TTT CATTATCACTATTAA TTTTATTTTTATTAT Fphi_0996 1073446 - 1074474 + | type IV pili nucleotide-binding protein Fphi_0997 1075675 - 1074629 - | NAD/FAD-dependent oxidoreductase Fphi_0998 1076079 - 1075633 - | hypothetical protein Fphi_0999 1077049 - 1076090 - | cytochrome bd-II terminal oxidase subunit II Fphi_1000 1078428 - 1077052 - | cytochrome bd-II terminal oxidase subunit I TERM 577 1077483 - 1077466 - G 71 -7.7 -3.62572 | overlap 1077480 TACCATGATTCTAAA GCTGTAG AATA CCACAGC AACTACTGGTCTATC TERM 578 1078484 - 1078462 - H 86 -9.2 -4.08216 | opp_overlap 1078462 1078459 TTATTGTTGTCAAAA CTAGCTAGAT TAT ATCTTGCTAG TAGCTTTTATTATGA TERM 579 1078462 - 1078484 + H 74 -9.2 -2.87028 | opp_overlap 1078462, overlap 1078459 TTATTGTTGTCAAAA CTAGCTAGAT TAT ATCTTGCTAG TAGCTTTTATTATGA TERM 580 1079170 - 1079181 + G 74 -5.8 -4.62904 | AAAATGATTCTGCCT GCCA AATT TGGC TTTTTGACAATGTTT Fphi_1002 1078648 - 1079529 + | hypothetical protein Fphi_1001 1080971 - 1079526 - | two-component regulator, sensor histidine kinase TERM 581 1080147 - 1080165 + g 79 -9.6 -3.20723 | TTCTACCAAGGTTTT GACTCCAG CAA TTGGAGTC TTAAGTTCATGCGCA TERM 582 1081693 - 1081680 - g 79 -5.3 -5.04987 | opp_overlap 1081680 AAGAGGGTGAAAAAA GAGTT ACAG AACTC TTTACGGGAGATGCT Fphi_1003 1081058 - 1082017 + | hypothetical protein TERM 583 1082047 - 1082035 - g 82 -4.1 -5.46657 | TATGGCAATAAAAAA GACAA ATG CTGTC TCTGAGAGAATATGG Fphi_1004 1082021 - 1083301 + | hypothetical protein TERM 584 1083965 - 1083942 - g 71 -9 -3.08112 | overlap 1083941 ATTCAAAGCATAAAG TGTTATTGCG TATG CACAATAACA AAGTCAAGAAAGAAC Fphi_1005 1083368 - 1084318 + | hypothetical protein Fphi_1006 1085611 - 1084331 - | major facilitator transporter Fphi_1007 1088814 - 1085698 - | RND efflux transporter Fphi_1008 1090187 - 1088814 - | membrane fusion protein TERM 585 1089540 - 1089570 + g 77 -9.1 -3.30338 | overlap 1089541 TATATTTTGAACTTG TGCTAATGCTGAT AAGTA ATCAGCGTTAGCC TTGTCAGCAGATTCT TERM 586 1089541 - 1089569 + g 86 -12.6 -2.57881 | overlap 1089540 ATATTTTGAACTTGT GCTAATGCTGAT AAGTA ATCAGCGTTAGC CTTGTCAGCAGATTC Fphi_1009 1090691 - 1090200 - | disulfide bond formation protein TERM 587 1090723 - 1090747 + r 70 -2.9 -5.34555 | TTCAAAGAAATTTTT GTAATTGTATC ATA GATTTAATTGC TTTTTTATAATATCC Fphi_1010 1091838 - 1090732 - | tRNA CCA-pyrophosphorylase TERM 588 1091627 - 1091639 + g 95 -3.4 -6.26417 | ACTTCAAAACCATGA TAGC CTTTA GCTA TTTTTTTTTCTGATC Fphi_1011 1091936 - 1093765 + | lipid A transport protein, ABC type transporter, ATP-binding and permease protein Fphi_1012 1093771 - 1094739 + | tetraacyldisaccharide 4'-kinase TERM 589 1097285 - 1097267 - g 89 -8.9 -4.50159 | opp_overlap 1097266 1097267, overlap 1097278 1097280 TGTAATCCAAAGAAA TGCTGCT GAAAG AGCAGCA ATTAATGCTCCAATG Fphi_1013 1094856 - 1097546 + | DNA polymerase I Fphi_1014 1097570 - 1098346 + | pantothenate kinase Fphi_1015 1098351 - 1099595 + | phosphopentomutase Fphi_1016 1099585 - 1100313 + | deoxyribose-phosphate aldolase TERM 590 1101010 - 1101022 + GF 71 -7.7 -3.64162 | opp_overlap 1101010 1101008 1101013, overlap 1101018 AGAATTTGAAGAAGA GAAGC AAG GCTTC TTTGAGATGCTTGCT TERM 591 1101022 - 1101010 - gf 70 -7.7 -3.4247 | opp_overlap 1101010 1101018, overlap 1101008 1101013 AGAATTTGAAGAAGA GAAGC AAG GCTTC TTTGAGATGCTTGCT Fphi_1017 1100288 - 1101505 + | nucleoside permease NUP family protein Fphi_1018 1101516 - 1102721 + | nucleoside permease NUP family protein Fphi_1019 1102727 - 1103341 + | dTMP kinase TERM 592 1103451 - 1103428 - g 72 -4.7 -4.67651 | opp_overlap 1103428 ATATTTTAAAAGAAA TTGCAAAAA GAAGAA CTTTTGCAA TTATTTCTCACCCAG Fphi_1020 1103406 - 1104983 + | peptide chain release factor 3 TERM 593 1105176 - 1105154 - g 70 -7.1 -3.77666 | TACAGTCAAGTCAAA TGACTATCT ATATA AGATAGCCA AAAGTCATTCAATAA TERM 594 1105750 - 1105731 - g 77 -5.8 -4.71791 | gap 1, opp_overlap 1105731 1105729 ATATCAAGAAAGAAA CGTGATCAT TTG ATG-TCACG TATTTCTCCTGTTGT Fphi_1021 1105059 - 1106360 + | type IV pili, pilus assembly protein Fphi_1022 1106395 - 1107396 + | signal recognition particle-docking protein FtsY Fphi_1023 1107481 - 1109709 + | DNA helicase II Fphi_1024 1109797 - 1111473 + | 4-phytase Fphi_1025 1111498 - 1112436 + | peptide/opine/nickel uptake transporter (PepT) family protein TERM 595 1113080 - 1113094 + G 72 -2.8 -5.25805 | GACAATCCCAACAGT GCTTAT GTT ATCAGC TTTTTTAAGTTTCTT Fphi_1026 1112436 - 1113296 + | peptide/opine/nickel uptake transporter (PepT) family protein Fphi_1029 1114288 - 1115262 + | peptide/opine/nickel uptake transporter (PepT) family protein Fphi_1030 1116468 - 1115266 - | major facilitator transporter Fphi_1031 1116603 - 1117214 + | hypothetical protein Fphi_1032 1117325 - 1118560 + | major facilitator superfamily sugar transporter TERM 596 1119349 - 1119370 + G 73 -7.3 -4.07687 | CTGGAGATCAGCAGT CAGCATTGT TTGG ACACTGCTG TTTTGAAGAAGGAAT Fphi_1033 1118604 - 1120103 + | glycerol kinase Fphi_1034 1120178 - 1121710 + | glycerol-3-phosphate dehydrogenase Fphi_1035 1121720 - 1122484 + | major intrinsic protein family permease Fphi_1036 1122610 - 1123146 + | hypothetical protein TERM 597 1123277 - 1123241 - g 76 -3.7 -5.28755 | overlap 1123267 AAATATATCAAAAAA CTGGTTTATCGTCTGCT TGA AGACTACGATAAAACAG TATCGCAATTTTTAT Fphi_1037 1123139 - 1123639 + | hypothetical protein Fphi_1038 1123639 - 1125054 + | DNA helicase TERM 598 1125447 - 1125431 - f 84 -10.9 -2.62616 | opp_overlap 1125422 1125413 TCAGTTGGTAGAGCA CTCCCTT GGT AAGGGAG AGGTCACCAGTTCAA Fphi_1039 1125525 - 1126709 + | elongation factor Tu TERM 599 1126774 - 1126758 - f 70 -8.7 -2.63631 | overlap 1126771 TCAATTGGTAGAGCA GCGGTCT CCA AAACCGC AAGTTGGGGGTTCGA TERM 600 1126817 - 1126844 + F 100 -10.6 -5.80003 | opp_overlap 1126817 CTGCCACATAATTAA GGCGGTGTTGTG TTTT TGCAACATCGCC TTTTTTATTTCTTGA Fphi_1040 1126941 - 1127366 + | preprotein translocase subunit SecE Fphi_1041 1127382 - 1127915 + | transcription antitermination protein NusG Fphi_1042 1127989 - 1128426 + | 50S ribosomal protein L11 TERM 601 1128640 - 1128654 + G 72 -5 -4.72272 | opp_overlap 1128640 ATGGTACTGGTAAAA CTGTTA GAG TAGCAG TTTTTGCTAAAGGCC Fphi_1043 1128426 - 1129121 + | 50S ribosomal protein L1 TERM 602 1129329 - 1129319 - g 82 -5.4 -5.35459 | opp_overlap 1129327 ATAGAGGATAAAAAA GCAA TTG TTGC TGAAGTTGCTGAACA Fphi_1044 1129292 - 1129810 + | 50S ribosomal protein L10 Fphi_1045 1129873 - 1130247 + | 50S ribosomal protein L7/L12 TERM 603 1130281 - 1130308 + F 91 -10.6 -4.06384 | opp_overlap 1130280, overlap 1130280 1130303 TTTTTAGAAATTTAT GACTAGTGGTCA GTTT TGGCCCCTAGTC TTTCTAGTATTGAAA TERM 604 1130341 - 1130360 + F 100 -8 -5.58522 | TACATAGATATTGGT GCAAATAT AGTC ATATTTGC TTTTTATTTTGTGTA TERM 605 1131229 - 1131210 - g 93 -4.4 -6.01725 | AAGAAAAATAAAAAA TTAACATC TAGA GATATTAA GAAAATCAAAGATGC TERM 606 1133837 - 1133824 - g 84 -5.3 -5.47218 | GCTTAGGTAAAAAAA TAGAG CAAA CTCTA GAAAAAACAAGAAAA TERM 607 1134105 - 1134125 + G 74 -9.1 -3.01984 | overlap 1134099 1134109 AAACCATTTGATAGG CATGTAACC GTT GGTTATATG TATATGCTTAAGTTA Fphi_1046 1130400 - 1134476 + | DNA-directed RNA polymerase subunit beta Fphi_1047 1134539 - 1138789 + | DNA-directed RNA polymerase, beta' subunit/160 kD subunit TERM 608 1138978 - 1138992 + G 93 -5.8 -5.77988 | TACTATTTGGTTTAG CAATTA TTG TAATTG TTTTTTTATCTATAT Fphi_1048 1138920 - 1139174 + | hypothetical protein Fphi_1049 1139174 - 1140184 + | O-sialoglycoprotein endopeptidase Fphi_1050 1140298 - 1141467 + | stearoyl-CoA 9-desaturase Fphi_1051 1143358 - 1142198 - | S-adenosylmethionine synthetase TERM 609 1143368 - 1143388 + H 74 -9.1 -2.89323 | overlap 1143380 TGACATTTTGTTCTC CCTTTTAGT GTT GCTAAAAGG TCTCTAGAAAATTTT Fphi_1052 1143652 - 1143900 + | 30S ribosomal protein S16 Fphi_1053 1143934 - 1144443 + | 16S rRNA processing protein RimM Fphi_1054 1144526 - 1145293 + | tRNA (guanine-N(1)-)-methyltransferase TERM 610 1145457 - 1145441 - g 70 -3.7 -4.96501 | opp_overlap 1145441 TCTTAGAAAAAGAAA CAGAG GTCTTCA CTCTG CTTTCACAGTAAGAA Fphi_1055 1145283 - 1145630 + | 50S ribosomal protein L19 Fphi_1056 1145649 - 1146527 + | site-specific recombinase TERM 611 1146735 - 1146753 + G 84 -6 -5.27923 | overlap 1146738 TCTAATTATGCTATT TACTCCTG GAC CAGGATTA TTTTTTATAGGATTA TERM 612 1146738 - 1146750 + G 83 -7.7 -4.72201 | overlap 1146735 AATTATGCTATTTAC TCCTG GAC CAGGA TTATTTTTTATAGGA Fphi_1916 1146577 - 1146864 + | hypothetical protein Fphi_1057 1146985 - 1147830 + | oxidoreductase iron/ascorbate family protein Fphi_1059 1147839 - 1148423 + | acid phosphatase, HAD superfamily protein Fphi_1058 1149304 - 1148420 - | LicB-like transmembrane protein Fphi_1060 1150114 - 1149395 - | non-ribosomal peptide synthetase/alpha-aminoadipate reductase-like protein Fphi_1061 1153091 - 1150095 - | non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related Fphi_1062 1153215 - 1153682 + | dinucleoside polyphosphate hydrolase Fphi_1063 1154321 - 1153683 - | phosphatidic acid phosphatase (PAP2) family protein, membrane associated TERM 613 1154049 - 1154029 - G 70 -6.9 -3.73042 | opp_overlap 1154018 1154028, overlap 1154027 GTGGTGATTAAAATA GTCATTATC AAG GTTAATGAC ATAATGTAGAGTTTT Fphi_1064 1154395 - 1154934 + | N-acetyl-anhydromuranmyl-L-alanine amidase Fphi_1065 1154939 - 1156243 + | hypothetical protein Fphi_1066 1157602 - 1156343 - | serine permease TERM 614 1156605 - 1156618 + g 84 -3.9 -5.70829 | overlap 1156609 1156612 TTTGAAGAGAATTTG TTCTT ATCA AAGAA TTTTTTTGTGATATT Fphi_1067 1159551 - 1157668 - | DNA topoisomerase IV subunit B TERM 615 1158164 - 1158188 + g 81 -10.9 -2.7035 | overlap 1158161 1158171 ATTGCTGTAGCTATG TTATGAACTTC TTG GGAGTTCATAA TAGTATCTGCATCAA Fphi_1068 1160830 - 1159649 - | drug:H+ antiporter-1 (DHA1) family protein TERM 616 1160786 - 1160772 - G 78 -7.8 -4.26344 | ATAGTGTCACCAAAA GGTCCC AAA GAGACC ATTAGAATCAAAATG Fphi_1069 1162392 - 1160830 - | hypothetical protein TERM 617 1162278 - 1162290 + g 93 -9.1 -4.63527 | TAACTTTCACCTTAG CCTCC TTC GGAGG TTTTTCAGCTAATGG Fphi_1070 1163033 - 1162395 - | hypothetical protein TERM 618 1162477 - 1162487 + g 71 -5.4 -4.58859 | AGAGCTTTATTCCAA GCAT CTA ATGC TTTATTCTTATCTTT Fphi_1071 1163219 - 1164463 + | glutamyl-tRNA reductase Fphi_1072 1164464 - 1165549 + | peptide chain release factor 1 Fphi_1074 1165542 - 1166399 + | HemK family modification methylase Fphi_1073 1166857 - 1166390 - | hypothetical protein Fphi_1075 1167625 - 1166861 - | hypothetical protein TERM 619 1168472 - 1168486 + G 75 -7.2 -4.25388 | ATGAAGCATTTTTCA TGGTAA TTT TTACCA TTTGCTTTTACTATA TERM 620 1168853 - 1168868 + G 71 -3.4 -5.1764 | TACGAGTTGAAATGC TATATA TGCT TATATA TTTTTATATTATATG TERM 621 1168923 - 1168935 + G 80 -4.9 -5.28683 | overlap 1168915 TTCCTATTTATTTGA TAAGT TAT ACTTA TTTTTTGCTATTGCT Fphi_1076 1167916 - 1169214 + | membrane protein of unknown function Fphi_1077 1169818 - 1169231 - | hypothetical protein Fphi_1078 1172150 - 1169808 - | hypothetical protein TERM 622 1171486 - 1171498 + g 74 -6.3 -4.39386 | TTAATTTGTTTGATA GCATT ATT AATGC TTTTGATAATTTCAG Fphi_1079 1172773 - 1172156 - | hypothetical protein Fphi_1080 1173165 - 1172737 - | 4-hydroxybenzoyl-CoA thioesterase TERM 623 1172788 - 1172799 + gr 77 -3 -5.5353 | overlap 1172782 TTGCTGAGGTGTTAC GAAA CAAG TTTC TTTTTTGTTAATATC Fphi_1081 1174108 - 1173170 - | putative acyltransferase Fphi_1082 1174839 - 1174090 - | glycosyltransferase TERM 624 1174541 - 1174555 + g 73 -8.6 -3.24708 | opp_overlap 1174541, overlap 1174539 ATATCGGTCGAATCA TGCTGA CCA TCAGCA TCTATTTGAAGCATA Fphi_1083 1175173 - 1174832 - | hypothetical protein Fphi_1084 1176565 - 1175252 - | aconitate hydratase TERM 625 1176287 - 1176317 + g 76 -7.7 -3.89971 | gap 1, overlap 1176286 1176289 1176293 AGAGTCGTAATATTT TG-CAAGCTTGGCA ATTG TGCCAGGTTTGTCA TTTGGTATCATTATA TERM 626 1176289 - 1176314 + g 80 -10.5 -3.00986 | overlap 1176286 1176287 1176293 AGTCGTAATATTTTG CAAGCTTGGCA ATTG TGCCAGGTTTG TCATTTGGTATCATT TERM 627 1176293 - 1176310 + g 78 -7.7 -4.16443 | overlap 1176286 1176289 1176287 GTAATATTTTGCAAG CTTGGCA ATTG TGCCAGG TTTGTCATTTGGTAT Fphi_1085 1177115 - 1176549 - | hypothetical protein TERM 628 1176797 - 1176811 + g 72 -5 -4.67608 | TCATACGAATTGCAA GTTTGG AAA TCAAAC TTTTGTCTTGGAATA Fphi_1086 1177381 - 1177127 - | putative acyl carrier protein Fphi_1087 1177640 - 1177392 - | putative acyl carrier protein Fphi_1088 1178434 - 1177658 - | putative phospholipid biosynthesis acyltransferase TERM 629 1177818 - 1177829 + g 79 -4.4 -5.252 | GTTTCGGCAATGTTA TACC ATTT GGTA TTTTTTGTCAAAGTA Fphi_1089 1179192 - 1178437 - | hypothetical protein TERM 630 1179219 - 1179208 - H 77 -3 -5.64006 | ATTGAAGTAAAAAAA TGTA TATC TACA ACCTTTTTAAGTATT Fphi_1090 1179322 - 1180503 + | 3-oxoacyl-(acyl carrier protein) synthase Fphi_1091 1180504 - 1180971 + | putative beta-hydroxydecanoyl-ACP dehydrase Fphi_1092 1180975 - 1181700 + | 3-oxoacyl-(acyl-carrier-protein) reductase, putative Fphi_1093 1181700 - 1182917 + | beta-ketoacyl-ACP synthase TERM 631 1182923 - 1182913 - f 71 -2.6 -5.42259 | TGATTTTCAAAAAAA TTTA GAA TAAA GATTATACTTTAGTC Fphi_1094 1182994 - 1183431 + | excinuclease ATPase subunit TERM 632 1183419 - 1183433 + T 70 -2.2 -5.40474 | TGCATTAAAAGGAGT TATTAT CAA ATAGTA TTTTTTTAACAGCAT Fphi_1095 1184674 - 1183439 - | putative enzyme TERM 633 1184217 - 1184231 + g 73 -7.2 -3.99324 | TCTAATCTATATTGT TCTTGA GTT TCAAGA TTTCTGATAGTCAGA Fphi_1096 1187031 - 1184794 - | ferrous iron transport protein B TERM 634 1187002 - 1186986 - G 70 -3.7 -4.84274 | opp_overlap 1186986 TAAGGACATTAAAAA TTGTTGT CTT ACCACAA TTTGGATTACCTACT Fphi_1928 1187354 - 1187028 - | hypothetical protein Fphi_1097 1187914 - 1187495 - | hypothetical protein TERM 635 1187807 - 1187821 + g 70 -7.2 -3.85698 | opp_overlap 1187816 GATGGCTAGTCCTGC GATATG AAA CATATC TTTATGCAAAACAAA Fphi_1098 1188130 - 1188417 + | co-chaperonin GroES TERM 636 1188780 - 1188770 - g 71 -6.8 -4.16251 | ACAGAAGGTCTAAAA GCAG TTG CTGC GGGTATGAACCCTAT TERM 637 1189515 - 1189505 - g 76 -6.8 -4.4959 | opp_overlap 1189511 GTTAATCAATTAAAA GCGA ATG TCGC TGAAGCTACTTCTGA Fphi_1099 1188455 - 1190086 + | chaperonin GroEL Fphi_1100 1190278 - 1191627 + | amino acid-polyamine-organocation (APC) superfamily protein Fphi_1101 1192452 - 1191631 - | short chain dehydrogenase/reductase family oxidoreductase TERM 638 1192671 - 1192661 - g 76 -2.6 -5.42862 | ATATGTTTAAAAAAA TATT TTT AATA GGAGCTTCTTTGTAT Fphi_1102 1192648 - 1194159 + | serine protease Fphi_1103 1194380 - 1194183 - | hypothetical protein TERM 639 1194391 - 1194401 + r 78 -2.6 -5.85011 | GACATTGTAACTCCC TTAT TAA ATAA TTTTTTTAATTTTTC Fphi_1104 1194879 - 1194394 - | hypothetical protein Fphi_1105 1196118 - 1194934 - | hypothetical protein TERM 640 1195292 - 1195302 + g 87 -6.8 -5.47399 | TTTAGTGTTACTTTT GAGC CTT GCTC TTTTTTTGAAGTTAA Fphi_1106 1197269 - 1196124 - | Bcr/CflA subfamily drug resistance transporter TERM 641 1197366 - 1197393 + r 80 -10 -2.9294 | opp_overlap 1197364, overlap 1197356 TGATTTTAGCAGATT TTGCTAGTGATT GAAT AGTCACTAGCAG TATATAAGTAATATA Fphi_1107 1198768 - 1197419 - | glutamate dehydrogenase TERM 642 1199512 - 1199496 - g 80 -6.6 -4.8236 | overlap 1199509 GACTTAAAAAAAGAA GGTGAT AGTAA ATCACC AGCAGGTATTTTCGA Fphi_1108 1199265 - 1199948 + | hypothetical protein Fphi_1109 1199963 - 1201147 + | diaminopimelate decarboxylase Fphi_1110 1201162 - 1202565 + | APC family gamma-glutamate:GABA antiporter Fphi_1111 1203153 - 1202599 - | methylated-DNA--(protein)-cysteine S-methyltransferase TERM 643 1203334 - 1203345 + G 76 -4.4 -5.20154 | AACAATATTGGGCTT TGCT AATC AGCA TTTTTTAGCTTGTAT TERM 644 1203705 - 1203737 + G 100 -14.3 -4.15061 | overlap 1203708 GAGACTTTTTCTGGG CAACACTACTGGGGA TAA TTCCTGGTAGTGTTG TTTATGTATGGGTTG TERM 645 1203708 - 1203734 + G 100 -10.2 -4.18674 | overlap 1203705 ACTTTTTCTGGGCAA CACTACTGGGGA TAA TTCCTGGTAGTG TTGTTTATGTATGGG Fphi_1112 1203197 - 1203889 + | hypothetical protein Fphi_1113 1203892 - 1205304 + | dihydrolipoamide dehydrogenase Fphi_1114 1205301 - 1205897 + | CDP-alcohol phosphatidyltransferase family protein TERM 646 1206199 - 1206187 - g 73 -7.7 -3.85698 | opp_overlap 1206186 1206187 TTTCTTTGCTATAAA TGCTG GCA CAGCA GTATTTGTTATGAAT Fphi_1115 1205897 - 1206283 + | hypothetical protein Fphi_1116 1206300 - 1206692 + | hypothetical protein Fphi_1117 1206851 - 1207777 + | chaperone protein DNA J TERM 647 1208106 - 1208133 + F 87 -11.4 -2.64051 | opp_overlap 1208111, overlap 1208111 AAAAGTAGTACTTGA TCAAATAGCGTG CATA CACGCTATTTGC TAGATTGTGTGGTCA TERM 648 1208128 - 1208111 - f 89 -9.9 -3.75169 | opp_overlap 1208111 1208106 TAGTACTTGATCAAA TAGCGTG CATA CACGCTA TTTGCTAGATTGTGT TERM 649 1208111 - 1208128 + F 89 -9.9 -3.81259 | opp_overlap 1208111, overlap 1208106 TAGTACTTGATCAAA TAGCGTG CATA CACGCTA TTTGCTAGATTGTGT Fphi_1118 1208349 - 1208870 + | hypothetical protein TERM 650 1208967 - 1208955 - g 75 -4.9 -4.89233 | TAGGAATAGCAAAAA TCTTT TTT AAAGA TAAAACAGAAAGAAA TERM 651 1209436 - 1209446 + G 70 -4 -4.95758 | TAAAATACTCAAAGT CAAT ATG ATTG TTTTTATCATCTACT TERM 652 1209819 - 1209808 - g 77 -3 -5.52023 | opp_overlap 1209808 ATTATCAATAAAAAA TCAT AATT ATGA TTATAGATGGGAAAA Fphi_1119 1208870 - 1210054 + | hypothetical protein Fphi_1120 1210168 - 1211112 + | integrase, catalytic region Fphi_1122 1211181 - 1211360 + | hypothetical protein Fphi_1121 1212235 - 1211357 - | 10 TMS drug/metabolite exporter protein Fphi_1123 1212421 - 1213617 + | hydroxy/aromatic amino acid permease (HAAAP) family protein Fphi_1124 1213649 - 1214005 + | hypothetical protein TERM 653 1214181 - 1214163 - f 75 -7.4 -4.1466 | overlap 1214178 AGGTAAGGGTGAAAA GGTGTGGT AAG AGCACACC GCATTGGTGGTAACA Fphi_1125 1214380 - 1216308 + | GTP diphosphokinase Fphi_1126 1216967 - 1216326 - | thymosin beta-4 family protein Fphi_1127 1217626 - 1217045 - | hypothetical protein TERM 654 1217287 - 1217307 + g 74 -6.2 -4.58698 | opp_overlap 1217287, overlap 1217289 TATGGACAAAACGAT TTTCACCA TTAGC TGGTGAGA TTATTTTTACTTTGA TERM 655 1217969 - 1217985 + G 88 -7.3 -4.94147 | CAAAAAGTAAGATTG CTGGCAA TAG TTGCTAG TTTTATTGTCTTGTT Fphi_1128 1217708 - 1218322 + | hypothetical protein Fphi_1129 1219050 - 1218328 - | hypothetical protein Fphi_1130 1219928 - 1219047 - | phage integrase family protein Fphi_1131 1221220 - 1219937 - | aromatic amino acid HAAP transporter TERM 656 1220727 - 1220711 - GR 70 -2.3 -5.32882 | TAGGATTATAAAAAA TCTATTA GCA TAATCGA CAAATCTTGTTCCTA Fphi_1132 1221617 - 1221168 - | preprotein translocase subunit SecB TERM 657 1221401 - 1221374 - GR 79 -9.2 -3.41936 | overlap 1221372 CAGTAATTGTAAATA TACCTGACTGAG TAAC CTCAGCCATGTA CGCATTTGCTTGTTT Fphi_1133 1224230 - 1221684 - | DNA mismatch repair protein Fphi_1134 1224401 - 1225348 + | tRNA adenylyltransferase Fphi_1135 1225379 - 1225882 + | pilus assembly protein Fphi_1136 1225863 - 1226876 + | pilus assembly protein TERM 658 1228352 - 1228336 - g 84 -3.7 -5.74684 | TAAGAAAAATAAAAA CAAACCT AAA AGACTTG GTGGAGATAAAAGTA Fphi_1137 1226885 - 1228828 + | hypothetical protein Fphi_1138 1228825 - 1229709 + | N-acetylmuramic acid-6-phosphate etherase Fphi_1139 1229711 - 1230112 + | hypothetical protein Fphi_1140 1231631 - 1230327 - | monovalent cation:proton antiporter-1 Fphi_1141 1232369 - 1231641 - | hypothetical protein Fphi_1142 1233375 - 1232371 - | tryptophanyl-tRNA synthetase Fphi_1143 1234977 - 1233604 - | hypothetical protein TERM 659 1235263 - 1235279 + r 75 -9.5 -2.62983 | overlap 1235266 TCGAACTCGCGACCC CAACCTT GGC AAGGTTG TGCTCTACCACTGAG TERM 660 1235347 - 1235363 + r 70 -8.7 -2.70275 | TCGAACCCCTAACCG CTCGGTT CGT AGCCGAG TACTCTATCCAGTTG Fphi_1144 1236036 - 1235422 - | dephospho-CoA kinase TERM 661 1235858 - 1235876 + g 84 -3.8 -5.63103 | opp_overlap 1235858, overlap 1235860 TTCATCACTACATCA TTGCCAAA TTT TTCGGCGA TTTTTTTGATTACGG TERM 662 1235953 - 1235963 + g 73 -4 -5.19251 | ATTTAAATTCATTTT TTCT TTT AGAA TTTTTGTTGCTGTTG Fphi_1145 1236170 - 1237306 + | hypothetical protein TERM 663 1240760 - 1240742 - g 71 -7.6 -3.61988 | TGATTTAGAAAGTAA TTTGATAA GTC TTATCAAA GGTGCTAGATTCGAG TERM 664 1241660 - 1241677 + G 85 -4.2 -5.60993 | TGCATTAAGTGTAGA GGTTTT ATTGCA AAAACC TTTTTTTGTAAAAGC TERM 665 1242962 - 1242945 - g 73 -7.1 -3.94002 | GATCAGCTAATCAAA TATAAGC CAGA GCTTATA CAACAAATGCTTGTA TERM 666 1243995 - 1243984 - g 71 -3 -5.04325 | opp_overlap 1243984 CGCAAAGTATAAAAA TAGT GCAG ACTA ATGTTTTGGCTCAAG Fphi_1146 1237389 - 1244282 + | polyketide synthase modules Fphi_1147 1244282 - 1245571 + | 8-amino-7-oxononanoate synthase Fphi_1148 1245579 - 1246193 + | hypothetical protein Fphi_1149 1246242 - 1246529 + | oligoketide cyclase/lipid transport protein Fphi_1150 1248067 - 1246694 - | putative cytochrome P450 TERM 667 1247913 - 1247925 + g 100 -9.1 -4.74012 | TTACCAACTTTTTTT TGGGG ATA CCCCA TTTTCATTTTATAGT Fphi_1151 1249138 - 1248071 - | hypothetical protein Fphi_1152 1250580 - 1249183 - | phosphoglycerol transferase-like protein TERM 668 1249715 - 1249702 - G 73 -3.9 -5.03314 | TTCACGGTTAAAAAA CTTTT TATT AAAAG GGTGGATTACCACAC Fphi_1153 1251337 - 1250582 - | short-chain dehydrogenase/reductase SDR Fphi_1154 1252553 - 1251342 - | capsule polysaccharide biosynthesis protein TERM 669 1251666 - 1251689 + g 88 -6.2 -5.69023 | gap 1, opp_overlap 1251668, overlap 1251656 ACCATCTAGTGTAAT TATCCTAG-AT TTT ATACTAGGATA TTTTTTTAGTCTTTT Fphi_1155 1252757 - 1254568 + | KpsD protein Fphi_1156 1254928 - 1255983 + | hypothetical protein Fphi_1157 1257015 - 1256164 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase Fphi_1158 1258282 - 1257023 - | capsular polysaccharide ABC transporter TERM 670 1257666 - 1257682 + g 75 -5.1 -4.99861 | overlap 1257657 TCCTGACTATCTTTT GTGATAG TAT CTAACAC TTTTTGTGCTTGCTC Fphi_1159 1258969 - 1258316 - | putative capsule polysaccharide export transport system ATP-binding protein TERM 671 1258464 - 1258480 + g 73 -3.8 -5.03145 | TTTTTTTTCTTTTCC TCAAAA ATAGC TTTTGA TTTTTTACCGAATTG Fphi_1160 1259773 - 1258979 - | polysialic acid transport protein KpsM TERM 672 1259826 - 1259853 + H 81 -10 -3.05993 | opp_overlap 1259828 1259830, overlap 1259828 1259830 ATGTGCTCGTTTTAA CAGATAGCTTGT AAAT ACAAGATATCTG TATATATCTGGATCG Fphi_1161 1260039 - 1261820 + | KpsD protein TERM 673 1262879 - 1262893 + G 71 -8.6 -3.09681 | TTTGGATTGGTTAGG CCTAGT AAC ACTAGG TTGAATGAGCTTTTA TERM 674 1264511 - 1264487 - g 70 -7.1 -3.78953 | opp_overlap 1264487 1264490, overlap 1264473 1264488 1264490 AGGCTTATTATTAAA CCACACCCTAT TCA AGAGGGTGTGC TGTTGCAATATATTT TERM 675 1264510 - 1264488 - g 79 -10.6 -2.87051 | opp_overlap 1264487 1264490, overlap 1264487 1264490 GGCTTATTATTAAAC CACACCCTAT TCA AGAGGGTGTG CTGTTGCAATATATT TERM 676 1265695 - 1265717 + G 73 -4.2 -4.84017 | GCTCAATTCTAGCTA CTTTTGGAGT AAG GTTTCAAAAG TTTTTGTAGGAGGTT TERM 677 1266597 - 1266579 - g 72 -6 -4.37734 | opp_overlap 1266583 1266592 TAGAAGAATCGAAAA GAGAGAGT TGG ACTCTTTC TAAAGATATTATAGA Fphi_1162 1261853 - 1269274 + | hypothetical protein Fphi_1163 1269279 - 1270469 + | UDP-N-acetylglucosamine 4,6-dehydratase Fphi_1164 1270456 - 1271613 + | DegT/DnrJ/EryC1/StrS aminotransferase Fphi_1165 1271613 - 1272194 + | acetyl transferase TERM 678 1272380 - 1272370 - g 70 -4 -4.86226 | ATATCAAAAAAATAA TACT GAA AGTA ATGAGTCTCAGTATG Fphi_1166 1272191 - 1272415 + | general stress protein 14 (GSP14) Fphi_1167 1272471 - 1273190 + | N-acylneuraminate-9-phosphate synthase TERM 679 1274317 - 1274295 - g 85 -4.2 -5.73672 | overlap 1274296 AAACAATTAAAAAAA CTGAATTAGA AAG TCTAATACAA AAAGAGTTCTACGAC Fphi_1168 1273187 - 1274350 + | UDP-N-acetylglucosamine 2-epimerase Fphi_1169 1274350 - 1275396 + | nucleotidyl transferase Fphi_1170 1275396 - 1276085 + | acylneuraminate cytidylyltransferase Fphi_1171 1276101 - 1277072 + | dehydrogenase TERM 680 1277510 - 1277522 + GF 70 -4.1 -4.69549 | TTATAGAGAATGATG GAGGT GTA ACTTC TTTTAATTTTGAATT Fphi_1172 1277047 - 1278036 + | dehydrogenase TERM 681 1278417 - 1278435 + G 71 -7.5 -3.53366 | AAATTGATGGAGTGT GCTCAAT ATGCA ATTGAGC TTATAGTTAGGTATA TERM 682 1278621 - 1278604 - g 75 -7.1 -4.10566 | ATAGTACTAGACAAA TTATTGC TGAT GCAATAA ATGAAAATCCTGGTT Fphi_1173 1278063 - 1280105 + | capsule polysaccharide export protein KpsC TERM 683 1280083 - 1280107 + F 73 -3 -5.52384 | GATTTTTGTATGAAT GGTTATTT AAGTTTAAA AAATAACC TTTTTTTGATGAAAA Fphi_1174 1280213 - 1281070 + | hypothetical protein Fphi_1175 1281654 - 1281322 - | transposase TERM 684 1282027 - 1282064 + r 85 -10.1 -3.47227 | gap 1 TAATTTCCCTATTTT GTGT-TCTATATCAGCGA TTA TGGCTGGTATAGATACAC TTATCCTACTTAAGC Fphi_1929 1282193 - 1282074 - | hypothetical protein TERM 685 1282257 - 1282271 + r 72 -5.7 -4.55295 | ATTTCTTCTTTTTTG CCTCT TGGTT AGAGG TTTATTTCTAACAGC Fphi_1176 1283065 - 1282265 - | transposase for IS1106 TERM 686 1282493 - 1282503 + g 89 -6.8 -5.59564 | AGCAAATACTTTATA GCCA TAA TGGC TTTTTTTACCTTTCT TERM 687 1283100 - 1283078 - R 81 -7.2 -4.72986 | opp_overlap 1283078 CATTTCTACTAAAAA TATAAATATC TGC GATATTCATA TTTTACAAAAATTTA Fphi_1177 1283892 - 1283254 - | hypothetical protein TERM 688 1283461 - 1283474 + g 70 -2.3 -5.23292 | AAAAGGTATGCTTAT GCTTC CTGA GTAGC TTTTGTTTTCTGTGG Fphi_1178 1284782 - 1283955 - | putative desulfatase TERM 689 1284812 - 1284829 + H 74 -4.9 -5.03945 | overlap 1284813 ACCTTTAGGCAACTT TGATAAC ATTT GTTATCG TTTTTGTGCTTATTG TERM 690 1285863 - 1285847 - g 71 -6.5 -4.15106 | TATGAATGTTGAAAA GGCTGTG AGT CACAGTC AGACAGCACAGATCT TERM 691 1285940 - 1285904 - g 86 -10.3 -3.53224 | overlap 1285910 TATGTTGTCGCTAAA TGTAAACACTATCGAAG ATT CTCCGACAATGTTTTCA CGTAGACTTATTGAG TERM 692 1285934 - 1285910 - g 73 -7.9 -3.84451 | overlap 1285904 GTCGCTAAATGTAAA CACTATCGAAG ATT CTCCGACAATG TTTTCACGTAGACTT Fphi_1179 1285203 - 1286198 + | putative spore protein Fphi_1180 1286205 - 1287179 + | capsule polysaccharide export protein KpsC Fphi_1181 1287468 - 1287608 + | hypothetical protein TERM 693 1287632 - 1287642 + G 93 -4 -6.01187 | opp_overlap 1287632 TCAAAAAATAACAGA TTCT AAG AGAA TTTTTTTGTTTGGTT Fphi_1182 1287612 - 1288721 + | capsule polysaccharide export protein Fphi_1184 1288971 - 1289915 + | integrase, catalytic region Fphi_1183 1290093 - 1289887 - | hypothetical protein Fphi_1185 1290535 - 1293213 + | pyruvate dehydrogenase subunit E1 Fphi_1186 1293231 - 1295102 + | dihydrolipoamide acetyltransferase Fphi_1187 1295118 - 1296530 + | pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase Fphi_1188 1296626 - 1297282 + | uracil-DNA glycosylase Fphi_1189 1297743 - 1297303 - | hypothetical protein Fphi_1190 1298333 - 1297746 - | hypothetical protein Fphi_1191 1298550 - 1298368 - | chitin-binding protein Fphi_1192 1299962 - 1299018 - | integrase, catalytic region Fphi_1193 1301214 - 1300030 - | hypothetical protein TERM 694 1300267 - 1300277 + g 79 -4 -5.43553 | ATTTTCATTGTTATG TTGA GGC TCAA TTTTATTTTTTGAAT TERM 695 1301748 - 1301758 + G 74 -6.8 -4.42639 | overlap 1301745 ATACTATTGTTAGGA TGGC TCA GCCA TTTTCATTACGCTAT Fphi_1194 1301474 - 1304068 + | DNA topoisomerase (ATP-hydrolyzing) Fphi_1195 1304074 - 1305228 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 696 1305837 - 1305872 + G 77 -5.4 -5.01546 | overlap 1305821 CTGGGCAGCAATATG GCTTTCCAGGTTCCAT CTAT ATGGAACCTATGGGGC TTTTTGTCTGCGTTT TERM 697 1306197 - 1306183 - g 75 -5 -4.91712 | overlap 1306185 TTGAAGGTATAAAAA CACTAC TAG GTAGTA AAGGTTATGCGTTTG Fphi_1196 1305234 - 1307612 + | outer membrane protein of unknown function TERM 698 1308161 - 1308136 - g 77 -5.5 -4.88405 | AATCGCTAAACAAAA GGGTTATAATA TTGT TATGACAACCC AAGCGCTAGCTTATG Fphi_1197 1307735 - 1308235 + | outer membrane protein OmpH Fphi_1198 1308256 - 1309272 + | UDP-3-O-(3-hydroxy-fatty acid)-glucosamine N-acyltransferase Fphi_1199 1309283 - 1309774 + | beta-hydroxyacyl-ACP dehydratase Fphi_1200 1309777 - 1310556 + | UDP-N-acetylglucosamine acyltransferase Fphi_1201 1310556 - 1311698 + | Lipid-A-disaccharide synthase TERM 699 1311750 - 1311740 - f 70 -3.2 -5.32882 | CATGAGTATAAAAAA CACC GCA GGTA CTAAATAAATGACAT Fphi_1202 1311759 - 1312343 + | hypothetical protein Fphi_1203 1313468 - 1312659 - | hypothetical protein Fphi_1204 1314294 - 1313536 - | (CDP-alcohol) phosphatidyltransferase Fphi_1205 1315237 - 1314356 - | geranyltranstransferase Fphi_1206 1316529 - 1315234 - | 3-deoxy-D-manno-octulosonic-acid transferase Fphi_1207 1317217 - 1316639 - | HAM1 protein TERM 700 1317926 - 1317905 - g 70 -7.3 -3.86524 | opp_overlap 1317908, overlap 1317908 1317919 AGAGGGTTGGATAAA CAACAGGCT GAAA AGCTTGTTG CTCAAACGTGTCTTG Fphi_1208 1317320 - 1318141 + | pyrroline-5-carboxylate reductase Fphi_1209 1318276 - 1318962 + | response regulator receiver protein Fphi_1210 1318967 - 1319830 + | Signal peptidase I Fphi_1211 1319835 - 1320527 + | ribonuclease III TERM 701 1321208 - 1321192 - g 77 -5.1 -5.06816 | opp_overlap 1321195 AGTTTTGAACAAAAA CTTGCTA GTA TAGCTAG TGTAGAGAGTGTATT Fphi_1212 1320514 - 1321422 + | tRNA pseudouridine synthase B Fphi_1213 1321415 - 1323715 + | exoribonuclease II Fphi_1214 1324566 - 1323736 - | delta 9 acyl-lipid fatty acid desaturase TERM 702 1324516 - 1324498 - G 84 -6.1 -5.3236 | ATAATTTACAAAAAA TATTGCT AAGCA AGCAATA TGCATAATAGCAAAG Fphi_1215 1325323 - 1324580 - | short chain dehydrogenase Fphi_1216 1325868 - 1325326 - | hypothetical protein Fphi_1217 1326383 - 1325865 - | hypothetical protein TERM 703 1325923 - 1325945 + g 74 -2.1 -5.40625 | opp_overlap 1325922, overlap 1325924 TTATCGCCAAGCCAT ATTTCAAAA AAATA TTTTGAAAG TTTTTTGTCTGGTAT TERM 704 1326270 - 1326255 - G 72 -2.6 -5.34055 | overlap 1326256 ATAAACATCAAAAAA CCATTT AGTG AAATGA ATTTTACCAACTTGT Fphi_1218 1327539 - 1326376 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 705 1326679 - 1326651 - G 84 -8.3 -4.60041 | opp_overlap 1326655, overlap 1326655 AGCCACCGGGAAAAA TAAAGGTTCTAAT CAT ATCAGTACCTTTA GCATAATCCGCAAAA TERM 706 1326675 - 1326655 - G 75 -4.7 -4.86385 | opp_overlap 1326655, overlap 1326651 ACCGGGAAAAATAAA GGTTCTAAT CAT ATCAGTACC TTTAGCATAATCCGC Fphi_1219 1328463 - 1327681 - | hypothetical protein Fphi_1220 1329710 - 1328457 - | NAD/FAD-binding protein TERM 707 1329569 - 1329556 - G 83 -6.7 -4.95302 | TTAAAGACAATAAAA CCAGT ATCT ACTGG AGTGCTATTAACTTC Fphi_1221 1330825 - 1329788 - | two-component regulator, sensor histidine kinase Fphi_1222 1331498 - 1330809 - | response regulator receiver protein TERM 708 1331771 - 1331752 - g 73 -8 -3.54622 | AAAAAATTATGACAA TTGATGAT CAAA ATCATCAA TATAAAGCAATTTTC Fphi_1223 1331640 - 1332176 + | hypothetical protein Fphi_1224 1332307 - 1332708 + | hypothetical protein TERM 709 1332793 - 1332812 + G 70 -2.2 -5.252 | overlap 1332796 CTTTATAACTTCGTT GTTTTATT TTTC AATAATAC TTTTTTGTGGAAATG TERM 710 1333028 - 1333006 - g 74 -6.4 -4.27843 | opp_overlap 1333009, overlap 1333003 1333007 CTCAAAGATAAAGAA GTATCAACTT ATC AAGTTGATAT ACTAAAAGATGTTGC TERM 711 1333027 - 1333007 - g 79 -9.9 -3.15621 | opp_overlap 1333009, overlap 1333006 1333003 TCAAAGATAAAGAAG TATCAACTT ATC AAGTTGATA TACTAAAAGATGTTG Fphi_1225 1332724 - 1333371 + | SAM-dependent methyltransferase Fphi_1226 1333455 - 1334060 + | hypothetical protein TERM 712 1334080 - 1334098 + F 86 -9 -4.16016 | ATTTCAAAATGGTTA TTTCAGAA TAG TTCTGAAA TTTCTTAAAACATAG TERM 713 1334223 - 1334197 - g 87 -10.3 -3.85698 | overlap 1334200 1334215 1334218 TGGTTGCTGCAGAAA CAACTGTAGAT ACTAA ATCTACAGCTG AGCAGTCGCAATCTG TERM 714 1334220 - 1334200 - g 79 -8.4 -4.06419 | overlap 1334197 1334215 1334218 TTGCTGCAGAAACAA CTGTAGAT ACTAA ATCTACAG CTGAGCAGTCGCAAT TERM 715 1334311 - 1334295 - g 100 -10.9 -4.24948 | TCATCAGATTCAAAA GCAGTTG CGA CAACTGC AGAAGATAAGAGATC Fphi_1227 1334127 - 1335551 + | hypothetical protein Fphi_1228 1335558 - 1336553 + | hypothetical protein Fphi_1229 1336501 - 1337946 + | hypothetical protein TERM 716 1338907 - 1338895 - g 71 -6.3 -4.21773 | overlap 1338898 GTTGAATACAAAGAA CAATC AAT GATTG AGGGAGAAATCCAGA Fphi_1230 1338148 - 1339164 + | ornithine cyclodeaminase Fphi_1231 1339180 - 1340049 + | hypothetical protein Fphi_1232 1340107 - 1341519 + | putative nicotinate phosphoribosyltransferase Fphi_1233 1341602 - 1341829 + | hypothetical protein Fphi_1235 1341984 - 1343264 + | sugar porter (SP) family protein Fphi_1234 1343745 - 1343257 - | hypothetical protein Fphi_1236 1344993 - 1343806 - | acetyl-CoA acetyltransferase Fphi_1237 1347699 - 1345006 - | bifunctional protein: 3-hydroxacyl-CoA dehydrogenase/acyl-CoA-binding protein Fphi_1238 1350012 - 1347772 - | acyl-CoA dehydrogenase Fphi_1239 1351737 - 1350043 - | long chain fatty acid CoA ligase Fphi_1240 1351954 - 1352301 + | arsenate reductase Fphi_1241 1352352 - 1354568 + | isocitrate dehydrogenase (NADP(+)) Fphi_1242 1354822 - 1358622 + | HrpA-like helicase TERM 717 1358808 - 1358820 + G 87 -6.3 -5.46698 | CGCTTATTTTTTTGA GATGT TTA ACATC TTTTTTACTTTTGCG TERM 718 1359644 - 1359664 + G 77 -9.9 -3.02829 | TGTGATCGAGAGTCA TTTGCTAAA GTT TTTAGCAAA TATTCGCCAAATATA Fphi_1243 1358654 - 1360414 + | dTDP-glucose 4,6-dehydratase Fphi_1244 1360421 - 1361038 + | galactosyl transferase Fphi_1245 1361041 - 1361826 + | UDP-glucose 4-epimerase TERM 719 1362439 - 1362427 - g 76 -7.7 -3.94846 | CCATGAAAAGCCAAA TGCTG CTA CAGCA GAGAAGTTTTTGGCA Fphi_1246 1361927 - 1363300 + | mannose-1-phosphate guanylyltransferase (GDP) Fphi_1247 1363340 - 1364479 + | GDP-D-mannose dehydratase TERM 720 1364467 - 1364479 + F 72 -4.9 -4.93318 | opp_overlap 1364467 CTATAGAATAAATAG TTACT TCG AGTAA TTTTTATAAATTCTA TERM 721 1364555 - 1364583 + G 76 -7.5 -3.96932 | opp_overlap 1364554 TATACTTGATAAATC GTTTAACTTCTCT ATT AGAGTTGTTAAAC TTTATAAATATCTAT Fphi_1248 1364526 - 1364810 + | hypothetical protein Fphi_1249 1364903 - 1366042 + | GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase Fphi_1250 1366173 - 1367063 + | putative glucose-1-phosphate thymidyl transferase Fphi_1251 1367060 - 1367632 + | dTDP-4-dehydrorhamnose 3,5-epimerase Fphi_1252 1367788 - 1368693 + | dTDP-4-dehydrorhamnose reductase Fphi_1253 1369083 - 1370084 + | dTDP-glucose 4,6-dehydratase Fphi_1254 1370094 - 1370891 + | ABC-2 type transporter Fphi_1255 1370891 - 1372228 + | ABC-type polysaccharide/polyol phosphate transport system ATPase component-like protein Fphi_1256 1372218 - 1372625 + | WblP protein Fphi_1257 1372609 - 1373289 + | hypothetical protein TERM 722 1373737 - 1373754 + G 71 -5.5 -4.47707 | overlap 1373734 1373739 GACTACGTTGTATAT CTCAAGG AGCC CCTTGTG TTATTTTTGATGAAG Fphi_1258 1373298 - 1374212 + | hypothetical protein TERM 723 1374819 - 1374783 - g 73 -8.1 -3.6806 | AGAGATGCATTGAAA CATCCGCATAATGCA ACGCCTG TGCATAATGAGGATG AGATTAAAAGATTAG Fphi_1259 1374216 - 1375151 + | hypothetical protein TERM 724 1376067 - 1376055 - g 77 -4.9 -5.06735 | GATAAACTACAAAAA TATCT ATT AGATA ATGGTGTTCAAACAG Fphi_1260 1375155 - 1376252 + | DegT/DnrJ/EryC1/StrS aminotransferase Fphi_1261 1376242 - 1377333 + | cell wall biosynthesis glycosyltransferase-like protein TERM 725 1377595 - 1377613 + G 73 -8.8 -3.20164 | overlap 1377599 TCTCATCAGTCTTCT GCAACGGG AGC CCCGTTAC TTGGATTAAATATAG TERM 726 1377599 - 1377609 + G 72 -8.2 -3.40788 | overlap 1377595 ATCAGTCTTCTGCAA CGGG AGC CCCG TTACTTGGATTAAAT TERM 727 1378747 - 1378712 - g 70 -2 -5.35354 | CAGAGAATCAAAAAA TATCAAATAAGTTAGA AGAG TCTGAATTTTTTGATA ATAAATTTATAGGAT Fphi_1262 1377409 - 1379700 + | glycosyl transferase, group 1 Fphi_1263 1379694 - 1380386 + | hypothetical protein Fphi_1264 1380463 - 1381584 + | cell wall biosynthesis glycosyltransferase-like protein Fphi_1265 1381621 - 1382505 + | cell wall biosynthesis glycosyltransferase-like protein TERM 728 1382659 - 1382635 - g 71 -8.7 -2.97439 | opp_overlap 1382634 1382633 1382639 1382641, overlap 1382632 1382637 AAGTGTATTAAATCA GACATATTCAA ATA TTGAGTATGTC ATAGTTGATGGTGGT Fphi_1266 1382525 - 1383274 + | glycosyl transferase family protein Fphi_1267 1383336 - 1384361 + | glycosyltransferase-like protein TERM 729 1385448 - 1385434 - g 80 -5 -5.2696 | TCAAAATGCAAAAAA TACTGC AAA GCAATA TCAAAATGACTATAT Fphi_1268 1384358 - 1385509 + | glycosyl transferase, group 1 Fphi_1269 1385514 - 1386284 + | glycosyl transferase family protein Fphi_1270 1386321 - 1387805 + | phosphomannomutase Fphi_1271 1389176 - 1387914 - | transcription termination factor Rho TERM 730 1387962 - 1387972 + g 79 -4 -5.47159 | opp_overlap 1387962, overlap 1387950 CTCTTCATTAGTTAA TGAA CCT TTCA TTTTTTCTGTTAGGA Fphi_1272 1389541 - 1389218 - | thioredoxin TERM 731 1389586 - 1389599 + H 79 -6.7 -4.74518 | opp_overlap 1389586 1389577 CTAAAACTGAATTAA GCAGA AGCT TCTGC TTTATTTTGATAATT Fphi_1273 1389740 - 1390666 + | guanosine-5'-triphosphate,3'-diphosphate diphosphatase Fphi_1274 1390712 - 1391947 + | recombination factor protein RarA Fphi_1275 1392093 - 1394381 + | hypothetical protein Fphi_1276 1394451 - 1395407 + | DNA-directed RNA polymerase subunit alpha TERM 732 1395453 - 1395469 + F 90 -10.9 -3.28791 | AAATTGGTAGACGCG CCGGATT CAA AATCCGG TTCTGGCAACAGAGT TERM 733 1396077 - 1396099 + G 81 -9.2 -3.74224 | CAGAGTCATGGCGTT TGGCATTTGT GAT GCAAGTGCCA TTTGCCTGCTTTGCA Fphi_1277 1395590 - 1396993 + | major facilitator transporter Fphi_1278 1397072 - 1397842 + | TatD family hydrolase Fphi_1279 1397854 - 1398171 + | hypothetical protein Fphi_1280 1398616 - 1398182 - | hypothetical protein TERM 734 1399259 - 1399270 + G 82 -4.4 -5.46629 | opp_overlap 1399259 AGGAAAAAAAAGAAT GTCA GAGA TGAC TTTTTTTACAATATT Fphi_1281 1398849 - 1399610 + | hypothetical protein Fphi_1282 1399767 - 1400228 + | hypothetical protein Fphi_1283 1400319 - 1401242 + | ATP-binding cassette (ABC) superfamily protein Fphi_1284 1401251 - 1402030 + | ATP-binding cassette (ABC) superfamily protein Fphi_1285 1402981 - 1402037 - | glycosyl transferase Fphi_1287 1403155 - 1404051 + | inorganic phosphate/ATP-NAD kinase Fphi_1286 1404683 - 1404048 - | homoserine/threonine efflux family protein Fphi_1288 1404753 - 1405442 + | tRNA (guanine-N(7)-)-methyltransferase Fphi_1289 1405452 - 1406168 + | hypothetical protein TERM 735 1406640 - 1406628 - g 80 -2.7 -5.60864 | GATATATCAAAAAAA TTAGC TAA ACTAA AGGGTCAGACAGTTT Fphi_1290 1406172 - 1406687 + | acetyltransferase Fphi_1291 1406853 - 1408166 + | guanine deaminase TERM 736 1408539 - 1408551 + G 79 -4.1 -5.27335 | TTCAGCATTTGTCTC TGCTT TGG GAGCA TTTTTATTTGCACAC Fphi_1292 1408294 - 1409571 + | hypothetical protein Fphi_1293 1409662 - 1409967 + | ArsR family transcriptional regulator TERM 737 1410434 - 1410449 + G 78 -7.6 -4.21676 | opp_overlap 1410434 CTTTCGTTTACAGTA TCGCAA TATT TTGCGA TTTTGAGTGGGTTCT Fphi_1294 1410035 - 1410553 + | rhodanese-related sulfurtransferase Fphi_1295 1410586 - 1412277 + | uncharacterized NAD(FAD)-dependent dehydrogenase Fphi_1296 1412314 - 1413003 + | Zn-dependent hydrolase Fphi_1298 1413005 - 1413754 + | hypothetical protein Fphi_1297 1414355 - 1413747 - | 2OG-Fe(II) oxygenase family oxidoreductase Fphi_1299 1414853 - 1414407 - | hypothetical protein Fphi_1300 1415541 - 1415029 - | hypothetical protein Fphi_1301 1415959 - 1415558 - | hypothetical protein Fphi_1303 1416146 - 1416571 + | transcription termination factor Fphi_1302 1417325 - 1416555 - | carbon-nitrogen hydrolase Fphi_1304 1417491 - 1417907 + | hypothetical protein Fphi_1305 1419056 - 1417923 - | aspartate/tyrosine/aromatic aminotransferase Fphi_1306 1420103 - 1419159 - | integrase, catalytic region Fphi_1307 1422186 - 1420204 - | hypothetical protein Fphi_1308 1424123 - 1422186 - | hypothetical protein TERM 738 1423037 - 1423048 + g 77 -3 -5.42259 | opp_overlap 1423040 AAGGTATAATCCATA GTAT AAAA ATAC TTTTTTTAAAACTAA Fphi_1309 1426198 - 1424192 - | hypothetical protein TERM 739 1425149 - 1425139 - G 71 -5.4 -4.50943 | opp_overlap 1425139, overlap 1425134 1425142 GAATAATCCATAAAA GAGT TAA ACTC TTTAAGAAACTAAAT Fphi_1310 1428029 - 1426332 - | prolyl-tRNA synthetase TERM 740 1427771 - 1427782 + g 72 -5.8 -4.30987 | opp_overlap 1427770 CAGGACCAAATTTAT CCCA GCGG TGGG TTTCTTGTAAAAGCT Fphi_1311 1428812 - 1428276 - | DsbB family disulfide bond formation protein Fphi_1312 1429448 - 1429864 + | sulfur acceptor protein SufE Fphi_1313 1429864 - 1430622 + | uroporphyrinogen-III synthase TERM 741 1431462 - 1431435 - gf 71 -8.6 -2.77416 | opp_overlap 1431435, overlap 1431421 1431428 ATGATCAAGATAGCA TTGATCAAGCTA AAGA TAACCTGATCAA TATTGTCGATCGATA TERM 742 1431617 - 1431605 - gf 72 -4.9 -4.73614 | GAGCAGCAAAATAAA CTTTT AGT AAAAG AATCGAACTTGGCTA Fphi_1314 1430582 - 1431667 + | hypothetical protein TERM 743 1432592 - 1432579 - g 74 -5.3 -4.652 | AAATTATCTGAAAAA GTTCT TACT AGAAC TAACCATGATTATAA Fphi_1315 1431664 - 1432821 + | hypothetical protein Fphi_1316 1432835 - 1433593 + | hydroxyacylglutathione hydrolase Fphi_1317 1434325 - 1433600 - | hypothetical protein TERM 744 1435632 - 1435614 - g 75 -9 -3.47416 | opp_overlap 1435617, overlap 1435617 AAATCACCAATAAGA CAAGTATT TTT AATACTTG ATACTGATAATATTA TERM 745 1435862 - 1435850 - g 77 -4.9 -5.03314 | opp_overlap 1435850 GCTATGTCTAAAAAA TGTAA ATG TTACA TTTGCTAACTATGGT Fphi_1318 1434612 - 1436246 + | hypothetical protein TERM 746 1436366 - 1436350 - f 75 -9.5 -2.62983 | overlap 1436353 CTCAGTGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCGA Fphi_1319 1436758 - 1437810 + | hypothetical protein Fphi_1320 1437794 - 1438405 + | methyltransferase type 11 TERM 747 1438482 - 1438470 - T 72 -6.3 -4.4261 | CTTCTAACATTAAAA GAGTT AAC AACTC TACCGATTATTACTG Fphi_1321 1439101 - 1438448 - | prophage repressor protein TERM 748 1439617 - 1439601 - g 70 -2.3 -5.28481 | opp_overlap 1439602 1439604, overlap 1439602 GATTCAATCAAAAAA GTATCTA ACA TAGATAT AGTTATAAGAGAGTT Fphi_1322 1439268 - 1439645 + | hypothetical protein Fphi_1323 1440509 - 1439649 - | drug/metabolite exporter TERM 749 1441527 - 1441537 + G 76 -6.8 -4.56775 | opp_overlap 1441534 GTCTTATCACCACCA GCAC ATA GTGC TTTTTCAACACCAAT Fphi_1324 1440687 - 1442273 + | putative glutamate synthase Fphi_1325 1443213 - 1442302 - | hypothetical protein TERM 750 1445354 - 1445340 - g 70 -7.2 -3.78124 | ACCAATTATTAATAA CCATTT TTT AAATGG TAAAGTAACATTCTG Fphi_1326 1443469 - 1446771 + | exodeoxyribonuclease V, gamma subunit Fphi_1327 1446758 - 1447282 + | hypothetical protein TERM 751 1447617 - 1447604 - g 76 -2.5 -5.55664 | opp_overlap 1447604 CTACCAGCAAAAAAA TATTT ATCT AAATA TTCTGTATTAGGAAT Fphi_1328 1447385 - 1448530 + | choloylglycine hydrolase family protein Fphi_1329 1449201 - 1448860 - | hypothetical protein Fphi_1330 1450953 - 1449211 - | benzaldehyde lyase, putative Fphi_1331 1451173 - 1454730 + | ATP-dependent exoDNAse (exonuclease V) beta subunit Fphi_1332 1454723 - 1456495 + | exodeoxyribonuclease V Fphi_1333 1457398 - 1456628 - | pantothenate kinase Fphi_1334 1457737 - 1457402 - | aspartate alpha-decarboxylase Fphi_1335 1458516 - 1457731 - | pantoate--beta-alanine ligase Fphi_1336 1459366 - 1458503 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase Fphi_1337 1460018 - 1459302 - | hypothetical protein TERM 752 1459576 - 1459589 + gH 73 -4.5 -4.91084 | opp_overlap 1459568 GCTAAAACACACATT GCGTG ATAA TACGC TTTTTGACTTTTATT TERM 753 1461138 - 1461128 - g 77 -5.4 -5.00616 | GTTTTTGGCAAAAAA CTTC TCA GAAG TTGAAGTGTATCACC Fphi_1338 1460313 - 1462349 + | DNA ligase (NAD(+)) Fphi_1339 1462346 - 1462897 + | hypothetical protein Fphi_1341 1462986 - 1463474 + | acetyltransferase Fphi_1340 1464732 - 1463455 - | tRNA and rRNA cytosine-C5-methylase, sun protein TERM 754 1464029 - 1464005 - G 83 -11.7 -2.87243 | opp_overlap 1464004 1464003 1464012 1464025, overlap 1464002 1464012 GGAGCAGCACAAGCA TCCAAAATAAT ATC ATTATTTTGGA CATTAATAATATGTC TERM 755 1464310 - 1464328 + g 77 -5.3 -4.96762 | opp_overlap 1464310 AAGCATATTACTAAG CCATGGT GCAAG ATCATGG TTTTTATGCTCTGTA Fphi_1342 1465520 - 1464732 - | inositol-phosphate phosphatase TERM 756 1464764 - 1464776 + g 76 -2.7 -5.4833 | CTAAAATTTTGATAA GTTTA GGT TGAAC TTTTTTGTTGCCTGC TERM 757 1465188 - 1465199 + g 77 -3 -5.52986 | opp_overlap 1465188 AATAACACCTAAAAC GATA TCAT TATC TTTTTTTGCTGCAAT Fphi_1343 1466658 - 1465606 - | hypothetical protein Fphi_1344 1467969 - 1466770 - | hypothetical protein TERM 758 1467310 - 1467298 - G 77 -3.4 -5.40464 | overlap 1467300 TAGTAGAAACAAAAA TGCT GCAAA AGCA ATACAATATAAGCTT TERM 759 1468025 - 1468048 + H 71 -7.6 -3.61894 | CATAAGTAGTTATTT TTAGCAAGAT ACTA ATCTTGTTAA TTATTCGGACAAATT Fphi_1346 1468084 - 1468767 + | hypothetical protein Fphi_1345 1469041 - 1468760 - | hypothetical protein TERM 760 1469082 - 1469069 - R 77 -2.3 -5.76633 | overlap 1469070 TTATATATAAAAAAA TCCAC ATTT GTGGC CATTTAATTAGTTTT Fphi_1347 1470377 - 1469118 - | beta-ketoacyl-ACP synthase II TERM 761 1470433 - 1470415 - R 76 -4.6 -5.28176 | opp_overlap 1470415 TTCATTTAGAAAAAA GTACGA ACACAAA TCGTAC TGACTTTAGAGATTA Fphi_1348 1470698 - 1470456 - | acyl carrier protein Fphi_1349 1471540 - 1470797 - | beta-ketoacyl-ACP reductase Fphi_1350 1472474 - 1471554 - | malonyl-CoA:ACP transacylase Fphi_1351 1473490 - 1472519 - | Beta-ketoacyl-acyl-carrier-protein synthase I Fphi_1352 1474642 - 1473596 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 762 1474457 - 1474473 + g 84 -3.8 -5.61824 | AATGGCTATTCTCTG TAAAAC GGGCA GTTTTA TTTTTTTGACTTTTG Fphi_1353 1474930 - 1474748 - | 50S ribosomal protein L32 Fphi_1354 1475492 - 1474974 - | hypothetical protein TERM 763 1477588 - 1477570 - g 75 -8.2 -3.80877 | opp_overlap 1477569 1477577, overlap 1477568 1477577 TTACTGTAGAAAATA TCAGCAAC ATA GTTGCTAA ATATGTGTAATAAAC Fphi_1355 1475607 - 1477598 + | transketolase TERM 764 1477813 - 1477797 - g 85 -8.7 -4.13014 | GGTAGATTTTCAAAA GCAGCTG TTA CAACTGC AAAAGATGACGCTAT TERM 765 1477996 - 1478025 + G 77 -5.7 -4.89233 | overlap 1477999 AAGTAGTTATTTCAG CTCCTGCTGGTAA TGAT TTACCAACGGTAG TTTTTGGTGTTAATC TERM 766 1478055 - 1478080 + G 73 -7.6 -3.79906 | opp_overlap 1478054 CATGATATATTAACT GCAGATGAGA AAATTA TCTCAGCTGC TTCTTGTACAACTAA Fphi_1356 1477635 - 1478636 + | glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) Fphi_1357 1478656 - 1479834 + | phosphoglycerate kinase TERM 767 1481091 - 1481109 + G 75 -8.2 -3.72315 | overlap 1481089 AGCAATGACATTGTT TAGAGGAG TTG TTCCTCTA TATTTTGACTCTACT TERM 768 1481187 - 1481206 + G 75 -7.2 -4.10161 | overlap 1481190 AAGCAGAGGCTTAGC CAAGGATG GTGA CATTCTTG TTTTGACAAGTGGTG Fphi_1358 1479850 - 1481286 + | pyruvate kinase Fphi_1359 1481297 - 1482361 + | fructose-1,6-bisphosphate aldolase Fphi_1360 1483925 - 1482468 - | Alpha,alpha-trehalase TERM 769 1483289 - 1483313 + g 73 -4.4 -4.84359 | CGTTTACATTTCTTT GAGTATTCAT CCAAA ATGAGTATTC TTTTTCTAAAGATGG Fphi_1361 1485136 - 1483928 - | fucose permease-like protein TERM 770 1486273 - 1486259 - g 70 -7.2 -3.81 | opp_overlap 1486259 AGGAGCGTATAATAA GTTTCT GAT AGAAAC TATTAAAAAATTAGT Fphi_1362 1485309 - 1486457 + | anhydro-N-acetylmuramic acid kinase TERM 771 1490096 - 1490068 - g 80 -7 -4.58724 | gap 1 TAAAGACAATGAAAA CTTGTACTCATAT AGCA ATATGAGTA-AAG ATGAATACGTTAAGA Fphi_1363 1486538 - 1490272 + | hypothetical protein Fphi_1364 1490356 - 1490919 + | intracellular growth locus protein A TERM 772 1491830 - 1491816 - g 77 -5.8 -4.67353 | opp_overlap 1491818 TCAGTTAGTTAAAAA TATGAT GAG ATCATA TGATAAAACTAGATG TERM 773 1492376 - 1492355 - g 71 -6.7 -4.19817 | opp_overlap 1492359, overlap 1492359 GGTATTCATGTAAAA TAAATGTGA TTCC TCACATTCA ATTTGAAGGTATGGA TERM 774 1492372 - 1492359 - g 74 -5.3 -4.68908 | opp_overlap 1492359, overlap 1492355 TTCATGTAAAATAAA TGTGA TTCC TCACA TTCAATTTGAAGGTA Fphi_1365 1490932 - 1492452 + | intracellular growth locus, subunit B TERM 775 1492445 - 1492429 - f 74 -8.1 -3.56593 | AGGTTAGAACCAGAA TTATTCG GTG CGAATAA TAACTAAAAACAAGG TERM 776 1492663 - 1492653 - g 74 -6.8 -4.40804 | GAGGATGTTACAAAA GCAG ATT CTGC GACAGCTGCTGCTAG Fphi_1366 1492470 - 1493099 + | intracellular growth locus, subunit C TERM 777 1493949 - 1493934 - g 71 -3.4 -5.10064 | opp_overlap 1493934 GTGAATATAGAAAAA TTAATA ACTT TATTAA ATTTGAACTGCAAGG Fphi_1367 1493123 - 1494319 + | intracellular growth locus protein D Fphi_1368 1495051 - 1494332 - | hypothetical protein TERM 778 1494412 - 1494422 + g 91 -2.6 -5.98781 | TTATTCTTATTGAGT TATT TCT AATA TTTTTTTTAATTATC TERM 779 1494544 - 1494554 + g 76 -2.6 -5.40072 | opp_overlap 1494544 ATCCACCAAGATAGA TATT GCC AATA TTTTTTTGCCCAACA Fphi_1369 1496262 - 1495069 - | hypothetical protein TERM 780 1495444 - 1495456 + g 73 -4.1 -5.00895 | ATGTATATCGCCAAT GATTG GAG CGATC TTTTTGTATAATGGA Fphi_1370 1496897 - 1496277 - | hypothetical protein Fphi_1371 1498339 - 1496912 - | hypothetical protein TERM 781 1497019 - 1496994 - G 85 -4.1 -5.65177 | opp_overlap 1496995, overlap 1496995 ATACCTATAAAAAAA TCTAAGAAATA TTTA TATTTCTCAGT ATATCTATTGCTTGT TERM 782 1497018 - 1496995 - G 76 -7.6 -3.9748 | opp_overlap 1496995, overlap 1496994 TACCTATAAAAAAAT CTAAGAAATA TTTA TATTTCTCAG TATATCTATTGCTTG TERM 783 1497325 - 1497345 + g 76 -2.6 -5.40464 | CCTCAGCTAATTGTG TCCATGTT GTATA AGTATGGA TTTTTGTTTCTAGTA Fphi_1372 1498872 - 1498351 - | hypothetical protein TERM 784 1498885 - 1498899 + r 78 -4.3 -5.42514 | overlap 1498884 CATTACACACTCCAG TAAGC TTCTT GCTTA TTTTTTAATTTATCG Fphi_1373 1500587 - 1498872 - | hypothetical protein TERM 785 1499339 - 1499356 + g 100 -7.1 -5.85178 | TGAAATCCGATTTTT TTGCTAT TTCT ATAGCAA TTTTTTTTAGATGTT TERM 786 1500478 - 1500496 + g 71 -3.1 -5.14682 | opp_overlap 1500478 TGAAATTTGATAATA TTGTCGA TACAT TCGTCAA TTTTGTTTATTCTAA Fphi_1374 1501087 - 1500593 - | hypothetical protein Fphi_1375 1501477 - 1501100 - | hypothetical protein Fphi_1376 1504736 - 1501467 - | hypothetical protein Fphi_1377 1507202 - 1504740 - | hypothetical protein TERM 787 1505332 - 1505347 + g 74 -6.2 -4.5464 | TTAGGATATTCTGGA GCTATA TCGC TATAGC TTTTAATTCTATATG TERM 788 1508623 - 1508643 + r 70 -7.6 -3.3676 | gap 1, opp_overlap 1508610, overlap 1508607 CAGTGACAGGTGCTG CACG-GCTG TCGT CAGCTCGTG TTGTGAAATGTTGGG TERM 789 1509091 - 1509072 - R 73 -9.2 -2.65808 | opp_overlap 1509078, overlap 1509069 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATCACCTCCTTA TERM 790 1509907 - 1509895 - R 77 -7.7 -4.2354 | GAAAGGTGAAAAGAA CCCTT ATA AAGGG AGTGAAATAGAATCT TERM 791 1509944 - 1509927 - R 73 -7.7 -3.72485 | AAATAGAATCTGAAA CCGCTTG CATA CAAGCAG TAGGAGCATTATTTA TERM 792 1512504 - 1512536 + r 88 -9.4 -4.1347 | gap 1, opp_overlap 1512504 1512510, overlap 1512510 TCGTGATAAGCAATA CA-AAAAGCCTCATA GAAA TATGGGGCTTTTGTG TTTATATGCTTACCA TERM 793 1512529 - 1512510 - R 82 -6.4 -5.1485 | opp_overlap 1512504 1512510, overlap 1512504 TAAGCAATACAAAAA GCCTCATA GAAA TATGGGGC TTTTGTGTTTATATG TERM 794 1512510 - 1512529 + r 95 -8.6 -4.87328 | opp_overlap 1512510 1512504, overlap 1512504 TAAGCAATACAAAAA GCCTCATA GAAA TATGGGGC TTTTGTGTTTATATG Fphi_1378 1513429 - 1512989 - | hypothetical protein Fphi_1379 1514735 - 1513812 - | putative cystathionine beta-synthase Fphi_1380 1516245 - 1515199 - | choloylglycine hydrolase family protein TERM 795 1516362 - 1516346 - H 80 -5.9 -5.14563 | GTCTGTAGCAAAAAA TGCATAA GAG CTATGCA TAAATGAGGGTAATG TERM 796 1516858 - 1516847 - g 73 -4.4 -4.91109 | GTTGTACTATAAAAA CTCT TGTA AGAG CTAAAAATAAACTTT Fphi_1381 1516378 - 1517262 + | transcriptional regulator, LysR family protein Fphi_1382 1518817 - 1517465 - | tRNA modification GTPase TrmE Fphi_1383 1519065 - 1518820 - | hypothetical protein Fphi_1384 1519185 - 1519493 + | sigma54 modulation protein Fphi_1385 1519525 - 1519977 + | PEP-dependent sugar phosphotransferase system (PTS), enzyme IIA Fphi_1386 1519970 - 1520719 + | rRNA methylase Fphi_1387 1520716 - 1521273 + | ribonuclease H TERM 797 1521778 - 1521794 + G 73 -9.5 -2.84794 | overlap 1521774 ATATATCTAGGGTAT TCAGCAT ATA ATGCTGA TGCTTCTACACTTGG Fphi_1389 1521274 - 1522533 + | solute:sodium symporter Fphi_1388 1523529 - 1522528 - | hypothetical protein TERM 798 1523302 - 1523288 - G 89 -8.6 -4.51799 | opp_overlap 1523287 1523288 1523290 ATCAAACTGACAAAA GATGCT AGA AGCATC ATTATTAGAACAAGA TERM 799 1523476 - 1523464 - G 89 -6.3 -5.66684 | TAAGCTAGAAAAAAA TACAG AAG CTGTA ATCGTCGAAGCAAAA TERM 800 1523499 - 1523518 + g 71 -3 -5.07567 | overlap 1523503 AAGCAAAAATATAAT TATTTTTA TCTG TGAAAATA TTTTTTGACATATAA Fphi_1390 1523927 - 1523535 - | diguanylate cyclase Fphi_1391 1523988 - 1524491 + | hypothetical protein Fphi_1393 1524512 - 1524697 + | hypothetical protein Fphi_1392 1525133 - 1524669 - | integrase, catalytic region Fphi_1394 1525612 - 1525187 - | integrase, catalytic region Fphi_1395 1525726 - 1526796 + | amidohydrolase Fphi_1396 1527238 - 1526831 - | ClpXP protease specificity-enhancing factor Fphi_1397 1527857 - 1527240 - | macrophage growth locus, protein A Fphi_1398 1528307 - 1527918 - | 30S ribosomal protein S9 Fphi_1399 1528751 - 1528323 - | 50S ribosomal protein L13 TERM 801 1528529 - 1528541 + g 79 -4.1 -5.27476 | overlap 1528504 1528502 ATCCAGTGTGGTGGT GGTAA ATT TTGCC TTTTCTTTTGTTACC Fphi_1400 1530077 - 1528875 - | protoporphyrinogen oxidase Fphi_1401 1531221 - 1530070 - | membrane-bound lytic murein transglycosylase TERM 802 1531744 - 1531723 - g 84 -3.8 -5.76949 | gap 1 TACGCTCAAAAAAAA TGG-TCTAG AAGAG CTAGATCCA AAGGGTGAGAAGTTT Fphi_1402 1531325 - 1531900 + | co-chaperone GrpE Fphi_1403 1531997 - 1533925 + | 2-alkenal reductase TERM 803 1533945 - 1533971 + F 72 -3.7 -5.22006 | opp_overlap 1533950, overlap 1533950 AATCTAAATAAGTCA ACAAAGTGTGG TTTAT CCACACTTTCC TTTTTGTTATAATAG TERM 804 1533950 - 1533966 + F 81 -8 -4.44392 | opp_overlap 1533950, overlap 1533945 AAATAAGTCAACAAA GTGTGG TTTAT CCACAC TTTCCTTTTTGTTAT TERM 805 1533966 - 1533950 - f 81 -8 -4.29977 | opp_overlap 1533950 1533945 AAATAAGTCAACAAA GTGTGG TTTAT CCACAC TTTCCTTTTTGTTAT TERM 806 1534527 - 1534541 + G 71 -6.4 -4.08692 | opp_overlap 1534527 AACAATTAGAAGACA GCAAGG TTT CTTTGC TTTTGAACAAACTTG Fphi_1404 1534015 - 1535139 + | heat shock protein DnaJ Fphi_1405 1535695 - 1535276 - | putative lipoprotein Fphi_1406 1536523 - 1535774 - | NAD(+) synthase (glutamine-hydrolyzing) Fphi_1407 1538091 - 1536619 - | outer membrane efflux protein Fphi_1408 1539142 - 1538102 - | membrane fusion protein Fphi_1409 1540698 - 1539166 - | drug:H+ antiporter-1 family protein Fphi_1410 1540845 - 1541663 + | transcriptional regulator AraC family protein TERM 807 1541667 - 1541683 + T 74 -2.3 -5.63857 | opp_overlap 1541667, overlap 1541670 1541672 1541675 AGCGAGAATTAATGA GAGTTTT ATA AAAAATC TTTTTTTAACTTTTT Fphi_1411 1543363 - 1541672 - | long chain fatty acid CoA ligase Fphi_1412 1544955 - 1543474 - | alkaline phosphatase TERM 808 1544243 - 1544223 - G 79 -5.5 -5.04249 | overlap 1544238 TTTCTAAAAAATAAA TTGTAGCTA ATA CAACTACAA TGGCAGTAATTGAAA Fphi_1413 1545772 - 1545047 - | hypothetical protein TERM 809 1545678 - 1545660 - G 74 -6.8 -4.44461 | AATAATTCTATAAAA TCAGACTT TTT AAGTCTAA GTACATTTTTGAAGT Fphi_1415 1545843 - 1546529 + | membrane protein of unknown function Fphi_1414 1547226 - 1546519 - | hypothetical protein Fphi_1416 1547962 - 1547231 - | cell entry related family protein TERM 810 1547928 - 1547939 + g 70 -2.2 -5.38321 | AAAATTACGAATAGT CCTG CAAT TAGG TTTTTTATACTATTT Fphi_1417 1548733 - 1547972 - | ATP-binding cassette (ABC) superfamily protein Fphi_1418 1549840 - 1548743 - | ABC-type transport system permease protein TERM 811 1549900 - 1549887 - R 70 -5.3 -4.55673 | AAATATACTAGAAAA TGGTA CTAA TACCA ACTAGAAGCTAACTC Fphi_1419 1550750 - 1549914 - | hypothetical protein TERM 812 1550512 - 1550524 + gr 100 -4.9 -6.32017 | ATAGCTGAAAGCATG TATTC AAT GAATA TTTTTTTTCTTTCTT Fphi_1420 1551699 - 1550713 - | lysozyme Fphi_1421 1551786 - 1552610 + | competence lipoprotein ComL Fphi_1422 1552712 - 1554511 + | FAD binding family protein Fphi_1423 1556129 - 1554675 - | hypothetical protein Fphi_1424 1557653 - 1556400 - | serine hydroxymethyltransferase TERM 813 1556741 - 1556753 + g 80 -6.3 -4.67011 | TAATATTAATGTTAC GTTCT TTT AGAAC TTTTTCCATAGCCTT Fphi_1425 1557756 - 1558301 + | hypothetical protein Fphi_1426 1558430 - 1559737 + | hypothetical protein Fphi_1428 1559997 - 1560878 + | mannosyltransferase OCH1-like protein Fphi_1427 1561957 - 1560875 - | hypothetical protein TERM 814 1561713 - 1561725 + g 80 -6.3 -4.77165 | AAAAACTTGCGAATT TGTCT TTT AGACA TTTTATTATACGAGA TERM 815 1561916 - 1561938 + g 78 -2.1 -5.75342 | overlap 1561913 TTTTATGATGGGTTT TTTGTAAGA AAAAA TATTACAAA TTTTTTTTAAAAAGA TERM 816 1563153 - 1563143 - g 70 -4 -4.91977 | CATCAAAATATAAAA TTCA AAA TGAA GCTGAAGGAATTCAG Fphi_1429 1562143 - 1563207 + | glycosyl transferase group 1 family protein Fphi_1430 1564411 - 1563209 - | tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) TERM 817 1564218 - 1564234 + g 93 -9.5 -4.2828 | TTATTGCATATTGTT TGGCAAT GTA ATTGCCA TTTTAGTGCATCAGG Fphi_1431 1565647 - 1564412 - | D-3-phosphoglycerate dehydrogenase Fphi_1432 1566485 - 1565661 - | thymidylate synthase TERM 818 1566053 - 1566067 + g 80 -5 -5.24129 | TACCTTTAGCGACAT TCTCTT GAG GAGAGA TTTTTTCTGAAGGAA Fphi_1433 1567276 - 1566470 - | prolipoprotein diacylglyceryl transferase Fphi_1434 1569967 - 1567295 - | ribonuclease E TERM 819 1569761 - 1569773 + g 71 -3.4 -5.0916 | overlap 1569764 AGAAACTTCCTTGAA TGGT AAAAA ACCA TTTTTATCTTCACCA Fphi_1435 1570218 - 1571393 + | cysteine desulfurase Fphi_1436 1571386 - 1571715 + | hypothetical protein Fphi_1437 1571699 - 1572400 + | DNA repair protein RecO Fphi_1438 1573060 - 1572410 - | DedA family protein Fphi_1439 1573743 - 1573117 - | DedA family protein Fphi_1440 1574014 - 1573748 - | hypothetical protein Fphi_1441 1574566 - 1574018 - | 5-formyltetrahydrofolate cycloligase TERM 820 1574618 - 1574638 + H 74 -8.3 -3.6608 | overlap 1574629 TTTTAGTTCAATATT CTTGATCCC TAT GGTATCAAG TTTGGGTGCCATAGT Fphi_1442 1575007 - 1575543 + | hypothetical protein Fphi_1443 1575552 - 1576763 + | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 821 1577870 - 1577860 - g 85 -6.8 -5.23316 | GATTATATTAAAAAA GCTC GTA GAGC CGGATTTGAGTTTGT Fphi_1444 1576753 - 1577934 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Fphi_1445 1578638 - 1577937 - | acid phosphatase TERM 822 1577963 - 1577981 + g 76 -7.6 -3.91028 | TTTCTTGTCGAGCTT TTTCTAAA TCT TTTAGAAA TTCTTGGTTTCCATT TERM 823 1578099 - 1578124 + g 74 -9.1 -3.14487 | opp_overlap 1578099 1578108, overlap 1578098 TTTTCTATCAGCTAA CTCAAAAAGCT GCTT AGCTGTTTGAG GTTTTAGCTCTGCTA TERM 824 1578124 - 1578099 - G 74 -9.1 -3.09516 | opp_overlap 1578099 1578098, overlap 1578108 TTTTCTATCAGCTAA CTCAAAAAGCT GCTT AGCTGTTTGAG GTTTTAGCTCTGCTA Fphi_1446 1579928 - 1578840 - | DEAD-box ATP dependent DNA helicase TERM 825 1579552 - 1579568 + g 84 -3.7 -5.74086 | ATTCTGCCAACAGAG CCAACTA CAA TATTTGG TTTTTTCTTTAATTT TERM 826 1579813 - 1579825 + g 71 -3.4 -5.03145 | TTTAGCCAGATATTT TCTC CATTT GAGA TTTTTTCAAAGCTTA TERM 827 1580366 - 1580353 - g 71 -6.7 -4.13341 | ACATATTAAAGCAAA TCGCT CACC AGCGA TAGGCAGTGAAATAT Fphi_1447 1580060 - 1581076 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase Fphi_1448 1581095 - 1581412 + | hypothetical protein Fphi_1449 1581438 - 1581635 + | hypothetical protein Fphi_1450 1581750 - 1582535 + | haloacid dehalogenase-like hydrolase Fphi_1451 1582598 - 1583311 + | hypothetical protein Fphi_1452 1583308 - 1583964 + | hypothetical protein Fphi_1453 1583961 - 1584677 + | hypothetical protein Fphi_1454 1585559 - 1584849 - | hypothetical protein TERM 828 1585632 - 1585614 - H 79 -6.8 -4.74132 | opp_overlap 1585605, overlap 1585616 ACAGGGGATTAAAAA TCTGCTAT AAT ATAGCAAA ATAATTTCTTGATAA Fphi_1455 1585674 - 1586051 + | lactoylglutathione lyase Fphi_1456 1586051 - 1586623 + | hypothetical protein Fphi_1457 1587385 - 1586624 - | S-adenosylmethionine (SAM)-dependent methyltransferase TERM 829 1586747 - 1586759 + g 74 -3.5 -5.252 | overlap 1586739 1586737 ATCAGTATTAGTTAC TTTAT CTA ATAAA TTTTTTCTAAAAGTC TERM 830 1586813 - 1586792 - G 73 -8.1 -3.55563 | AGCCCAGTTTCTAAA GCCATTAGA GCCT TCTAATAGC GTAGGTCTTTCAAAT Fphi_1458 1587639 - 1587394 - | hypothetical protein Fphi_1459 1588366 - 1587653 - | hypothetical protein Fphi_1460 1588512 - 1589294 + | enoyl-ACP reductase I Fphi_1461 1589446 - 1590408 + | metallo-beta-lactamase superfamily protein Fphi_1462 1590420 - 1590749 + | hypothetical protein TERM 831 1591290 - 1591267 - g 71 -6.8 -4.14627 | overlap 1591283 TCTTGATATAAATAA TGTTTATGTC AATG GACATAACCA TAGCTATGATGCTTA Fphi_1463 1590746 - 1591558 + | hypothetical protein Fphi_1464 1591555 - 1592253 + | hypothetical protein Fphi_1465 1592264 - 1592851 + | hypothetical protein Fphi_1466 1593817 - 1592855 - | arabinose-5-phosphate isomerase TERM 832 1593291 - 1593279 - G 74 -6.3 -4.4595 | opp_overlap 1593278 1593285 TGAGAAAATGCAAAA TCTCT AGC AGAGA AATTCTTGGCTTTAA TERM 833 1594543 - 1594557 + G 80 -6.4 -4.66609 | overlap 1594545 GAGTTGATGCTTTTG TGGCTG GGT CAGCTA TTTTTAACTCAGATA Fphi_1467 1593954 - 1594622 + | ribulose-phosphate 3-epimerase TERM 834 1595824 - 1595852 + G 74 -3.2 -5.36689 | GAAAATAAGCTTAAG CTCGATCTTGTA TATAT TAGAAGATGGAG TTTTGTTTTTGATTT Fphi_1468 1594603 - 1596000 + | sugar transferase involved in lipopolysaccharide synthesis Fphi_1469 1595993 - 1597012 + | UDP-glucose 4-epimerase TERM 835 1597519 - 1597535 + G 86 -8.1 -4.65838 | TTGGTGTAGTATTAT TTTGGTT TCA AACCAAA TTTTTAAACTCTATA TERM 836 1598601 - 1598578 - g 81 -8.2 -4.08958 | CTATCAAAGAAAATA TTGCTTTTGG CGAA CCAAAGGCAA GCATAGATGAAACTA Fphi_1470 1597248 - 1598939 + | ATP-binding cassette (ABC) superfamily protein TERM 837 1599386 - 1599431 + G 83 -11.5 -2.90392 | opp_overlap 1599384 1599395, overlap 1599395 AGCACGAGATAGACT TGGTATAAAGCCATTATATTT TTTT GAAAATAATGGCTTTATAACA TATAGTTCAGAAGTA Fphi_1471 1598979 - 1600502 + | asparagine synthase (glutamine-hydrolyzing) Fphi_1472 1600504 - 1600920 + | putative glycerol-3-phosphate cytidyltransferase Fphi_1473 1600932 - 1602134 + | putative teichoic acid biosynthesis protein F Fphi_1474 1602140 - 1603099 + | glycosyl transferase family protein Fphi_1475 1603112 - 1604218 + | glycosyl transferase, group 1 TERM 838 1604208 - 1604198 - f 84 -4 -5.8187 | opp_overlap 1604198 TATTTAACAAAAAAA CTTT ATG AAAG TATCTTATAAGCAAA Fphi_1476 1604242 - 1604619 + | glycosyl transferase Fphi_1477 1604855 - 1604983 + | hypothetical protein TERM 839 1605736 - 1605764 + G 71 -3.3 -5.11063 | opp_overlap 1605736 1605741 1605745 TATATAGATCTAAAG TTAAAGAAATAAT TAA ATTAGTTCTTAAA TTTTTATTACCTCAT Fphi_1478 1604973 - 1605812 + | glycosyl transferase family protein Fphi_1479 1605852 - 1606949 + | glycosyltransferase-like protein Fphi_1480 1607013 - 1607756 + | putative teichuronic acid biosynthesis glycosyl transferase TERM 840 1608245 - 1608225 - g 70 -8.3 -3.24076 | overlap 1608223 1608226 TGACTATAGAAGATA CTGGCTTAG TTT CCAAGCCAA AGACTAAATATTTTG TERM 841 1608244 - 1608226 - g 75 -9.6 -2.53964 | overlap 1608225 1608223 GACTATAGAAGATAC TGGCTTAG TTT CCAAGCCA AAGACTAAATATTTT Fphi_1481 1607819 - 1608481 + | haloacid dehalogenase-like hydrolase TERM 842 1608500 - 1608518 + T 83 -10.4 -2.80816 | TAAATGATACCGTCA TCCTGAAT TTG ATTCAGGA TCTCCTAGATAGGGC TERM 843 1608584 - 1608601 + T 70 -7.7 -3.39018 | opp_overlap 1608575 1608572, overlap 1608582 AAACATGTATAGTCA TACCTGC GCAG GCGGGTA TCTTTAGGCTAGTGG TERM 844 1608649 - 1608632 - T 71 -8.5 -2.81464 | TTATGATTTATGAGA TTCCCAT CTTC ATGGGAA TGACGTAGTGAAATG Fphi_1482 1609804 - 1608698 - | ribokinase TERM 845 1610414 - 1610424 + G 76 -6.8 -4.53705 | opp_overlap 1610414, overlap 1610412 GTTGCAGGTACATCA GCAG GAG CTGC TTTTATCTCAGGCTT Fphi_1483 1610006 - 1610824 + | peptidase Fphi_1484 1610958 - 1611818 + | asparaginase TERM 846 1611920 - 1611904 - f 75 -9.5 -2.62616 | opp_overlap 1611906, overlap 1611906 TCAGTCGGTAGAGCA GAGGATT GAA AATCCTC GTGTCGGTGGTTCGA TERM 847 1612097 - 1612081 - f 70 -8.7 -2.69468 | overlap 1612078 CATCTGGATAGAGCA TCGGCCT TCT AAGCCGA GGGTAGCAGGTTCGA TERM 848 1612963 - 1612979 + G 77 -9.5 -3.31144 | TATTTGGTATTTTTA GTCAAGA GGT TCTTGAC TTATGGGGATGGAGG Fphi_1485 1612446 - 1613702 + | major facilitator transporter Fphi_1486 1613794 - 1615002 + | putative capsule biosynthesis protein Fphi_1487 1615026 - 1615490 + | capsule biosynthesis protein CapC TERM 849 1616360 - 1616347 - g 70 -2.3 -5.35222 | opp_overlap 1616347 AAAACTGATAAAAAA GCAAC TAAT GTAGC TTCTAATGATCAAGT Fphi_1488 1615492 - 1616694 + | hypothetical protein TERM 850 1617235 - 1617259 + G 90 -10.9 -3.79668 | opp_overlap 1617234 1617239 AGAGAAAAAACGTAG GATATCTAAAG AAA CTTTAGATGTC TTTGCTCCCTTAGCT Fphi_1489 1616765 - 1618879 + | GTP diphosphokinase Fphi_1490 1619410 - 1618910 - | transposase and inactivated derivative TERM 851 1619050 - 1619066 + g 70 -4.5 -4.78764 | overlap 1619064 AAACAGAGTCATCTT TAGGAAA TAT TTTCTTA TTTTTAATAACTTTA TERM 852 1620761 - 1620714 - R 75 -9.7 -2.77029 | gap 1, overlap 1620713 TAAACATTTCTAAAT GCTCACTATTTTCATAAATTAA TAATC TTAATCTATGAAAATAAT-AGC TGGCTGTGGTTTTAT Fphi_1491 1620885 - 1620694 - | IS1016 family transposase Fphi_1493 1620998 - 1621750 + | glycerophosphoryl diester phosphodiesterase Fphi_1492 1622482 - 1621733 - | hypothetical protein TERM 853 1623113 - 1623099 - g 70 -7.2 -3.78022 | overlap 1623110 GTTAGATTTATTAAA TTTGCT CAA AGCAAA GAGTTTGGACCAAGT TERM 854 1623176 - 1623160 - g 74 -2.3 -5.41746 | overlap 1623162 AAGCTGCTAAAAAAA GAGATAT TCC ATATCTT AGACTAAATGATCAG TERM 855 1625308 - 1625296 - g 74 -3.4 -5.28315 | opp_overlap 1625296 1625298, overlap 1625298 ATAAAATTGAAAAAA GAGA GATGT TCTC TGCTTCAGTAATAGC Fphi_1494 1622607 - 1625429 + | cyanophycin synthetase TERM 856 1625598 - 1625575 - g 81 -6 -4.87052 | overlap 1625577 GATAAATTAACAAAA CTTTTCTACC AAGA GGCAGAAAGG ATACTACCAGCTCTT Fphi_1495 1625464 - 1627149 + | Mur ligase family protein Fphi_1496 1627629 - 1627150 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 857 1627401 - 1627411 + g 70 -4 -4.9218 | opp_overlap 1627401 CAGCTAAGAAAAATT TACT ATC AGTA TTTTTATACTCCATG Fphi_1497 1628389 - 1627640 - | rhodanese-like family protein TERM 858 1628426 - 1628436 + r 71 -2.6 -5.38326 | GATCAAATAACTATT TATA TTT TATA TTTTTATTTGCTTAA Fphi_1498 1629072 - 1628461 - | hydroxy/aromatic amino acid permease (HAAAP) family protein Fphi_1500 1629429 - 1630373 + | integrase, catalytic region Fphi_1499 1630719 - 1630345 - | hydroxy/aromatic amino acid permease (HAAAP) family protein TERM 859 1630467 - 1630482 + g 71 -3.2 -5.03747 | opp_overlap 1630467 AAGCACATATATAAA CCAGAA TGAC TCCTGG TTTTTTAAAGAGTTT Fphi_1501 1632273 - 1630801 - | methionine uptake transporter (MUT) family protein, membrane and periplasmic protein TERM 860 1631232 - 1631242 + g 79 -4 -5.41787 | TAGCGCCGTTTGGAA TATC TTG GATA TTTTTATATTTTTTA Fphi_1502 1633303 - 1632251 - | D-methionine transport protein, ABC transporter, ATP-binding subunit Fphi_1503 1633904 - 1633290 - | membrane protein of unknown function TERM 861 1633417 - 1633407 - G 80 -6.8 -4.77036 | overlap 1633408 TGCTATTATCAAAAA TGGC GTT GCCA CCTGCAAATCAGATG Fphi_1504 1634057 - 1635163 + | queuine tRNA-ribosyltransferase Fphi_1505 1636165 - 1635203 - | LysR family transcriptional regulator TERM 862 1635897 - 1635916 + g 82 -3 -5.65927 | gap 1, overlap 1635899 GTAATAACTAGATTT CT-TTTATC CGT GATAAATAG TTTTTTGTTTAAGTG TERM 863 1636107 - 1636091 - G 73 -3.7 -5.06816 | opp_overlap 1636081 1636082 ATTGTGTAAGAAAAA CTTACTT ATA ATGTAAG AATAAAGCGTTTTAC Fphi_1507 1636179 - 1636628 + | hypothetical protein Fphi_1506 1637569 - 1636625 - | integrase, catalytic region Fphi_1508 1637751 - 1638098 + | hypothetical protein Fphi_1509 1638062 - 1638706 + | isochorismatase hydrolase family protein Fphi_1510 1639118 - 1640341 + | fucose permease-like protein TERM 864 1641181 - 1641195 + G 87 -10 -3.96624 | CTCAAATAGCTAGAG GTGGTG AAT CACCAC TTTATGATGCGGATG TERM 865 1641362 - 1641376 + G 70 -3.6 -4.98531 | TTACAAAGGGGATAG TTATCA ATC TGGTAA TTTTTGGTTTGAAGA Fphi_1511 1640352 - 1641800 + | hypothetical protein TERM 866 1641831 - 1641811 - f 75 -5.5 -4.91084 | AATAAAAGCCAAAAA TTAGAATGT CCA ACTTTCTAA TAAAACACTTATTCT TERM 867 1641932 - 1641919 - f 71 -3.9 -5.18355 | TTTAAAAATTAAAAA TTTTC GGGA GAAAA AATGAGAAAGTTACT Fphi_1512 1641934 - 1642290 + | preprotein translocase family protein TERM 868 1642532 - 1642520 - g 71 -6.3 -4.09243 | opp_overlap 1642520 1642518 CACAGCTTGTCAAAA GTATC GAA GATAC TCTTGATACTGACAA TERM 869 1642653 - 1642639 - g 70 -2.1 -5.2696 | CTAAAAGCTAAAAAA GCTCT GAAAG AAAGC CTAGGGGATCAGTAT Fphi_1513 1642348 - 1644285 + | preprotein translocase subunit SecD Fphi_1514 1644304 - 1645245 + | preprotein translocase subunit SecF Fphi_1515 1645317 - 1645805 + | hypothetical protein TERM 870 1645895 - 1645846 - g 84 -3.7 -5.67967 | ATGACCACAAAAAAA TTATTACCAGTTGCAAAAGGCAA ATCG TTACCAGTTGTATCTGATAATAA CCTAAATTCATACCT Fphi_1516 1645831 - 1646709 + | RNA polymerase factor sigma-32 Fphi_1517 1646799 - 1648079 + | 3-phosphoshikimate 1-carboxyvinyltransferase Fphi_1518 1648079 - 1648678 + | hypothetical protein Fphi_1519 1648653 - 1649111 + | ribonuclease H Fphi_1520 1649114 - 1650145 + | L-asparaginase Fphi_1521 1650233 - 1650937 + | carbonate dehydratase Fphi_1522 1651011 - 1653359 + | type I restriction-modification system, subunit R (restriction) TERM 871 1653443 - 1653454 + G 72 -5.8 -4.45765 | TTAGCTTTTTTAACT CCCT GCTC AGGG TTTATTACTTTTGAA Fphi_1917 1653356 - 1653973 + | hypothetical protein Fphi_1523 1654041 - 1654985 + | integrase, catalytic region TERM 872 1655488 - 1655469 - g 79 -8 -3.97437 | ATGAAAAGAATAGAA GCATATAT GAGT ATATATGC GGTAAGTGGGATGTA TERM 873 1655532 - 1655509 - g 70 -8.4 -3.24924 | overlap 1655507 GTGGGATGTAGAATA TTTTTGTTAT TTTT ATAACAAAAA TCGAAAAAACACTAC Fphi_1524 1655042 - 1655560 + | hypothetical protein TERM 874 1655569 - 1655592 + F 75 -9.6 -2.60212 | overlap 1655568 AGTCTAGCGACTGCC ACCCCTTCAA TATT TTGAAGGGGA ATTGTAAACTAATGA TERM 875 1655614 - 1655631 + F 89 -11.3 -2.89564 | opp_overlap 1655610 1655609, overlap 1655616 AACTAATGAATGTCA TACCCGC GAAG GCGGGTA TCTCTAGAGTAGACA TERM 876 1655616 - 1655629 + F 78 -9.5 -3.00022 | opp_overlap 1655610 1655609, overlap 1655614 CTAATGAATGTCATA CCCGC GAAG GCGGG TATCTCTAGAGTAGA TERM 877 1655677 - 1655660 - f 74 -8.5 -3.17289 | overlap 1655658 1655656 CATAAATGTAAGAGA TTCCCAT CTAC ATGGGAA TGACTAAAGGCGAAC TERM 878 1655856 - 1655837 - f 70 -7.9 -3.51475 | overlap 1655835 1655833 GAAATAATAAAGAGA TTCCGTG TCGTAG CACGGAA TGACATAAACAAGGC Fphi_1525 1655891 - 1657114 + | type I restriction-modification system, subunit S TERM 879 1657230 - 1657251 + F 78 -10.2 -2.60941 | overlap 1657229 GATAATGTATTGTAA GGGTTGAC CTGTGT GTCAACCC ATTATGAAATATAAT TERM 880 1657306 - 1657280 - f 70 -6 -4.32482 | gap 1, overlap 1657282 1657291 ATCCATAATGTAAAA TAG-GGCTAAC ACATAG GTTAGCCCCTA CGGTAAATTGATTAT TERM 881 1657303 - 1657282 - f 89 -10.2 -3.76167 | overlap 1657280 1657291 CCATAATGTAAAATA GGGCTAAC ACATAG GTTAGCCC CTACGGTAAATTGAT TERM 882 1657331 - 1657351 + F 89 -11.2 -2.91322 | opp_overlap 1657328 1657327, overlap 1657328 GATTATAAAATGTCG GGGTCGAA TCCAT TTCGACCC TAATTTAAAAAATGT TERM 883 1657405 - 1657385 - f 71 -7.6 -3.51633 | ATATATGTTATACAA GGGCAGAT ATGGA ATCTACCC CTACAATAAATTATG TERM 884 1657758 - 1657738 - g 87 -9.8 -3.97444 | opp_overlap 1657752, overlap 1657752 ATAGGATGAATGAAA GGGCAAAT ATAGA ATTTGCCC CTACAAAAGTTCCTG TERM 885 1657880 - 1657870 - g 71 -5.4 -4.59853 | TCAACGGTGTAAAAA CCAA AAA TTGG CAATCATTTGATAAA TERM 886 1657954 - 1657944 - g 73 -4 -5.05505 | overlap 1657947 ATTAGAAATGAAAAA TCAT ATA ATGA GATTATAAAATATAT Fphi_1526 1657422 - 1658048 + | hypothetical protein Fphi_1528 1658029 - 1658349 + | type I restriction-modification system, subunit M (methyltransferase) Fphi_1527 1659290 - 1658346 - | integrase, catalytic region Fphi_1530 1659574 - 1660521 + | N-6 DNA methylase family Fphi_1529 1660980 - 1660516 - | hypothetical protein TERM 887 1661507 - 1661497 - g 70 -4 -5.00616 | CTGGTTTTGAAAAAA TTGA AGT TCAA AAGCCTGTCGTTGAG Fphi_1531 1661133 - 1662449 + | trigger factor Fphi_1532 1662475 - 1663080 + | endopeptidase Clp Fphi_1533 1663105 - 1664358 + | ATP-dependent protease ATP-binding subunit Fphi_1534 1664384 - 1666708 + | endopeptidase La Fphi_1535 1666794 - 1667066 + | DNA-binding protein HU-beta TERM 888 1667098 - 1667073 - f 70 -2 -5.4593 | overlap 1667076 GTAAAATAATAAAAA TTACAAAAAA AAGTAA TTTTTTGAAA GGCATGCTTAACGGT TERM 889 1667099 - 1667118 + F 100 -6.4 -6.06529 | opp_overlap 1667099 AGTAATTTTTTGAAA GGCATGCT TAAC GGTATGCC TTTTTTTTATCTATA TERM 890 1667252 - 1667270 + G 78 -2.4 -5.75945 | overlap 1667253 GATAAGTTTTATATT CGTCATAT CTG GTATGACA TTTTTTTTCACGAAT TERM 891 1668054 - 1668043 - g 74 -3 -5.37345 | CTGAATTAGAAAAAA CTTT AGGT AAAG CTAAAACAGCTAGCA Fphi_1536 1667178 - 1668611 + | hypothetical protein Fphi_1537 1668612 - 1669538 + | tRNA isopentenyltransferase TERM 892 1669809 - 1669788 - g 73 -8.1 -3.5511 | opp_overlap 1669786, overlap 1669786 1669789 TCGTACTTAGAAATA CTGTAAACC AAAT GGTTTACAA GCATGCTATTTCTAC TERM 893 1669808 - 1669789 - g 72 -9.4 -2.72745 | opp_overlap 1669786, overlap 1669788 1669786 CGTACTTAGAAATAC TGTAAACC AAAT GGTTTACA AGCATGCTATTTCTA Fphi_1538 1669643 - 1669972 + | host factor I for bacteriophage Q beta replication Fphi_1539 1670020 - 1671327 + | protease, GTP-binding subunit Fphi_1540 1671695 - 1671330 - | oxidoreductase Fphi_1541 1672513 - 1671740 - | oxidoreductase Fphi_1542 1672707 - 1673774 + | HflK-HflC membrane protein complex, HflK Fphi_1543 1673776 - 1674702 + | HflK-HflC membrane protein complex, HflC Fphi_1544 1674705 - 1675190 + | low molecular weight phosphotyrosine protein phosphatase Fphi_1545 1675187 - 1675780 + | GTPase EngB TERM 894 1675888 - 1675872 - f 74 -6.7 -4.28432 | AATTCTAAGTTAAAA TACTTTA GTA TAAAGTA GATCTAAAATCTTTT Fphi_1546 1675929 - 1677725 + | hypothetical protein Fphi_1547 1677749 - 1679431 + | dihydroxy-acid dehydratase Fphi_1548 1679579 - 1681276 + | acetolactate synthase large subunit Fphi_1549 1681281 - 1681598 + | acetolactate synthase small subunit Fphi_1550 1681623 - 1682666 + | ketol-acid reductoisomerase Fphi_1551 1686173 - 1682754 - | transcription-repair coupling factor TERM 895 1683693 - 1683703 + g 76 -4 -5.29208 | opp_overlap 1683693 CAAACGAGGGAATAA TTCT TGA AGAA TTTCTTTTTTCTTTT TERM 896 1685977 - 1685989 + g 72 -4.9 -4.7889 | opp_overlap 1685977 TCTAAGTTAGGAAAA TAGAA TAC TTCTA TTTTTGAGTCTTTAT Fphi_1552 1686906 - 1686220 - | hypothetical protein TERM 897 1686854 - 1686886 + g 75 -7.1 -4.19577 | overlap 1686856 TTAGCTCTTAGTGCA GACTCTTGTGATAGA GAA TCTATTACACGAGTA TTGTTTTCAAAGTTA TERM 898 1686856 - 1686884 + g 82 -9.7 -3.68836 | overlap 1686854 AGCTCTTAGTGCAGA CTCTTGTGATAGA GAA TCTATTACACGAG TATTGTTTTCAAAGT Fphi_1553 1687967 - 1687023 - | integrase, catalytic region Fphi_1554 1689327 - 1688068 - | hypothetical protein TERM 899 1689294 - 1689308 + g 78 -2.2 -5.66989 | GTTGATTAAAATGAA TATTTA CTT TAGATA TTTTTTTAATATTTC Fphi_1555 1689758 - 1689327 - | hypothetical protein Fphi_1556 1690393 - 1689755 - | DNA-(apurinic or apyrimidinic site) lyase TERM 900 1690354 - 1690374 + g 73 -7.7 -3.82664 | GAGGGTCATTTCTTT TCCAAGTTT CAA AAATTTGGA TTCTCTTCTGTCTAT Fphi_1557 1691015 - 1690386 - | iron-sulfur cluster-binding protein Fphi_1558 1691661 - 1691017 - | glutaredoxin 2 TERM 901 1691194 - 1691204 + g 70 -4 -5.0065 | AACAAAGGGAGCTAT TTCT CTA AGAA TTTTATTTATCGCTA TERM 902 1691434 - 1691447 + g 74 -5.3 -4.80882 | CGTTGATTCTGCTAT CTCAA AATT TTGAG TTTTTGCTATAAACT Fphi_1559 1692987 - 1691782 - | lipoprotein Fphi_1560 1693135 - 1694079 + | integrase, catalytic region Fphi_1561 1694182 - 1695654 + | alkaline phosphatase Fphi_1562 1696161 - 1695658 - | ferric iron binding protein, ferritin-like protein Fphi_1563 1696368 - 1697351 + | lipoyl synthase Fphi_1564 1697380 - 1698039 + | isoprenoid biosynthesis protein with amidotransferase-like domain Fphi_1565 1698057 - 1698803 + | hypothetical protein Fphi_1566 1698944 - 1699459 + | crossover junction endodeoxyribonuclease Fphi_1567 1699536 - 1700729 + | major facilitator superfamily sugar transporter Fphi_1568 1700737 - 1701393 + | Holliday junction DNA helicase, subunit A TERM 903 1702017 - 1702007 - g 74 -5.4 -4.7329 | overlap 1701997 1701996 AAAATGAGTTAAAAA CTCT TAA AGAG TTAAACCAAAAAATG TERM 904 1702713 - 1702692 - g 71 -6.7 -4.2679 | overlap 1702680 1702681 TAAGTCTTACGAAAA TGCTTTTAG TAAG CTAAAAACA GGCCGTGGAAACTTA Fphi_1569 1701409 - 1702827 + | RmuC family protein Fphi_1570 1702831 - 1703415 + | hypothetical protein Fphi_1571 1703715 - 1703419 - | hypothetical protein Fphi_1572 1704207 - 1703746 - | hypothetical protein TERM 905 1704754 - 1704766 + G 81 -7.7 -4.45484 | opp_overlap 1704753 TACAATGCTACAGAT GCTAG TAA CTAGC TTTATTGTATCTATT Fphi_1574 1704470 - 1705639 + | monovalent cation:proton antiporter family protein Fphi_1573 1706456 - 1705623 - | small conductance mechanosensitive ion channel family protein TERM 906 1707053 - 1707093 + r 80 -9.1 -3.63744 | overlap 1707051 TTAATTGCCATAGGT TCAGCGGTAGCTTTTATAG GAA CTCTAAAAGTAGCTGCTGA TGTTTTACCCGAGAG TERM 907 1707219 - 1707234 + r 83 -7.6 -4.64361 | GTTGGCAATCAGCTT TAGCCT TAAT AGGCTA TTTTGGTATTTTTTG TERM 908 1707524 - 1707534 + r 73 -5.4 -4.74215 | opp_overlap 1707515 ATAGCAGTTGGTGGA CCAT CGC ATGG TTTTATTGCTAGTCT Fphi_1577 1709283 - 1708000 - | major facilitator transporter Fphi_1578 1710283 - 1709276 - | hypothetical protein Fphi_1579 1710487 - 1711455 + | ribose-phosphate diphosphokinase Fphi_1580 1711557 - 1711847 + | 50S ribosomal protein L25 TERM 909 1712629 - 1712609 - g 71 -5.5 -4.52857 | overlap 1712624 ATTCTGTAGATAAAA TTTTAGCTA GAA TAGCAAAAA TGAGATCTTTGAATA TERM 910 1712765 - 1712746 - g 73 -3.6 -5.05116 | TCACAAATAACAAAA GCAAGTTT ACGT AAAATTGC CCATGAAGCGTATTT Fphi_1581 1711942 - 1713201 + | hypothetical protein Fphi_1582 1713495 - 1713217 - | putative lipoprotein Fphi_1583 1714603 - 1713512 - | translation-associated GTPase TERM 911 1714582 - 1714554 - G 79 -9.7 -3.31564 | opp_overlap 1714554, overlap 1714550 AGAGCATTAAATAGA GTTGATTTACCAA CAT TTGGTAAACCTAC GATACCACATTTAAA Fphi_1584 1715198 - 1714623 - | peptidyl-tRNA hydrolase Fphi_1585 1716075 - 1715191 - | Beta-lactamase Fphi_1586 1716929 - 1716084 - | hypothetical protein Fphi_1587 1717787 - 1716939 - | type IV pili leader peptidase and methylase Fphi_1588 1719190 - 1717790 - | soluble pyridine nucleotide transhydrogenase Fphi_1589 1720446 - 1719286 - | potassium channel protein Fphi_1590 1721976 - 1720525 - | proton-dependent oligopeptide transporter (POT) family protein, di-or tripeptide:H+ symporter Fphi_1591 1723433 - 1722066 - | ATP-dependent protease ATP-binding subunit TERM 912 1723048 - 1723064 + g 75 -5.1 -5.01546 | overlap 1723049 TCTAATATTCTATCT TCTGCTA ATA TAGCAGC TTTTTCTGTAACTTT TERM 913 1723049 - 1723063 + g 77 -8.6 -3.59301 | overlap 1723048 CTAATATTCTATCTT CTGCTA ATA TAGCAG CTTTTTCTGTAACTT Fphi_1592 1723992 - 1723441 - | ATP-dependent protease peptidase subunit Fphi_1593 1724178 - 1724930 + | hypothetical protein Fphi_1594 1725836 - 1724934 - | lipoate-protein ligase A TERM 914 1725248 - 1725235 - G 71 -5.3 -4.64334 | opp_overlap 1725235 AAGCCTTTAATAAAA GATCT TGTG AGATC TTGAGTTTGTATATC TERM 915 1726917 - 1726906 - g 82 -4.4 -5.46629 | opp_overlap 1726906 AAGATTCCAAAAAAA TCAG ATAC CTGA TGATATAAATGTTGT Fphi_1595 1725950 - 1727140 + | tyrosyl-tRNA synthetase Fphi_1596 1727461 - 1728342 + | oxidative stress transcriptional regulator TERM 916 1728947 - 1728957 + G 73 -4 -5.1356 | AGCAAAGGTAAGTGG TTGT AAG ACAA TTTTTGTTAATGCAG Fphi_1597 1728495 - 1729637 + | L-lactate dehydrogenase Fphi_1598 1729660 - 1731303 + | pyruvate decarboxylase Fphi_1599 1731352 - 1731693 + | hypothetical protein Fphi_1600 1731686 - 1732054 + | hypothetical protein Fphi_1601 1732188 - 1735010 + | 4Fe-4S ferredoxin, FAD dependent Fphi_1602 1735399 - 1735031 - | heat shock protein 15 (HSP15) TERM 917 1735179 - 1735189 + g 71 -5.4 -4.63172 | TAGAGTTTTTGAGCT TCAG TAG CTGA TTTTCTAATTTCATC Fphi_1603 1735514 - 1736329 + | hypothetical protein Fphi_1604 1738041 - 1736353 - | hypothetical protein TERM 918 1736402 - 1736415 + g 77 -5.3 -4.87328 | TCAATATCCTTTTCT GATGA TTGA TCATC TTTTCTATTTCTATA Fphi_1605 1738895 - 1738038 - | membrane fusion protein Fphi_1606 1739283 - 1740014 + | IclR family transcriptional regulator Fphi_1607 1740116 - 1741102 + | lysine 2,3-aminomutase Fphi_1608 1741244 - 1742188 + | integrase, catalytic region TERM 919 1743604 - 1743571 - g 76 -4.1 -5.186 | gap 1, opp_overlap 1743572, overlap 1743574 CAAAAGAGAGAAAAA GAATATCCTTATAATT ATA AATCATAAGGATAA-C TAGATTAGATAGATT Fphi_1609 1742488 - 1743597 + | hypothetical protein TERM 920 1743602 - 1743574 - T 100 -11.3 -4.62708 | opp_overlap 1743572, overlap 1743571 AAGAGAGAAAAAGAA TATCCTTATAATT ATA AATCATAAGGATA ACTAGATTAGATAGA Fphi_1610 1743812 - 1743609 - | cold-shock DNA-binding domain-containing protein Fphi_1611 1744340 - 1744011 - | hypothetical protein TERM 921 1744427 - 1744443 + H 70 -5.9 -4.27467 | overlap 1744417 TATGTTACGTAATAT GTATCTT TAG AGGATAC TTTGTATTACTATTA Fphi_1612 1744587 - 1744784 + | 30S ribosomal protein S21 Fphi_1613 1746331 - 1745279 - | DNA-directed DNA polymerase Fphi_1614 1746460 - 1746338 - | DJ-1/PfpI family protein TERM 922 1747032 - 1747052 + H 76 -4.1 -5.48787 | overlap 1747034 ATAGTGTAAACTTTC AATCTATAT TTT ATATAGATA TTTTTTATATGTTAT TERM 923 1747034 - 1747050 + H 74 -6.7 -4.35708 | overlap 1747032 AGTGTAAACTTTCAA TCTATAT TTT ATATAGA TATTTTTTATATGTT Fphi_1615 1747061 - 1747852 + | hypothetical protein Fphi_1616 1747929 - 1749818 + | ABC transporter, ATP-binding protein Fphi_1617 1751125 - 1749893 - | bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta Fphi_1618 1751393 - 1751133 - | glutaredoxin 1 Fphi_1619 1753169 - 1751397 - | ribonucleotide-diphosphate reductase subunit alpha TERM 924 1751974 - 1751984 + g 76 -6.8 -4.56597 | opp_overlap 1751974 GTACCAGCCATATCA GGAG CTT CTCC TTTTTCACGACCAAG TERM 925 1752243 - 1752222 - G 93 -8.9 -4.70266 | overlap 1752242 AACATTATCCAAAAA TCTTATCAA ATCT TTGATAAGA GAGGTATCTTTCCAC TERM 926 1753324 - 1753306 - R 83 -6.8 -4.90906 | opp_overlap 1753306 TTAGAATACTAAAAA GTCAAATA TTA TACTTGAC TTTGTTGAATCAGTT Fphi_1620 1754346 - 1753387 - | malate dehydrogenase TERM 927 1753931 - 1753950 + g 75 -5 -4.87273 | ATCCCAACGATTTTA TTATCAGG AACA CCTGAGAA TTTTTGTAGCATATT Fphi_1621 1754495 - 1755007 + | hypothetical protein Fphi_1623 1755023 - 1755658 + | hypothetical protein Fphi_1622 1756236 - 1755655 - | hypothetical protein TERM 928 1756292 - 1756311 + r 70 -2.2 -5.47159 | opp_overlap 1756286 1756284 AATGATATAGAAACG TATTTCTA GGGT TTGAAATA TTTTTATTTATTAAA Fphi_1624 1757061 - 1756315 - | ThiF family protein Fphi_1625 1758562 - 1757066 - | hypothetical protein TERM 929 1758407 - 1758431 + g 71 -3 -5.06414 | CATGTTTTTAAAATT TTTATCACAA TCCTC TTTTGATAAA TTTTTATTACAAAAG Fphi_1626 1759163 - 1758582 - | haloacid dehalogenase-like hydrolase Fphi_1627 1759305 - 1759904 + | AhpC/TSA family peroxiredoxin TERM 930 1760228 - 1760214 - g 75 -10 -2.55551 | GATAAGGTTAAGCTA CCCTTG TAT CAAGGG ATAGAGAATAATGTA TERM 931 1760547 - 1760566 + G 80 -9.4 -3.6217 | overlap 1760544 1760540 1760545 GTATATTTTATATTG GGTAATCT CAAT AGATTACC TGTTTATACTTACGC Fphi_1628 1759962 - 1761338 + | hypothetical protein Fphi_1629 1761442 - 1761774 + | phosphonoacetate hydrolase Fphi_1630 1761776 - 1761997 + | hypothetical protein Fphi_1631 1762002 - 1763573 + | hypothetical protein Fphi_1632 1763622 - 1764314 + | DNA-directed DNA polymerase Fphi_1633 1764308 - 1764781 + | D-alanyl-D-alanine carboxypeptidase TERM 932 1765525 - 1765496 - g 76 -4.5 -5.03715 | gap 1, opp_overlap 1765506, overlap 1765499 AGCAGTTTCAAAAAA TTATCAAGAATCAT TAA ATGAT-CTTGAAAA TGCCCAAAAATATAC TERM 933 1765852 - 1765864 + G 71 -7.7 -3.63837 | TGTATGCTATGAAGT CTCTC ATC GAGAG TTATTCAAAGGTTGT Fphi_1634 1764768 - 1766183 + | hypothetical protein Fphi_1635 1766354 - 1767469 + | dehydrogenase Fphi_1636 1767484 - 1768980 + | NAD-dependent aldehyde dehydrogenase Fphi_1637 1768983 - 1769783 + | hypothetical protein TERM 934 1769866 - 1769849 - f 83 -8.5 -4.37886 | opp_overlap 1769851 TTATCTTTGATAAAA TATACCC ATTA GGGTATA TTGAGGTTAAAGAAA Fphi_1638 1769882 - 1770154 + | hypothetical protein Fphi_1639 1770165 - 1770896 + | hypothetical protein TERM 935 1771835 - 1771815 - g 74 -3.3 -5.33985 | GGCAAAAAAAACAAA CAGGAATTA TCT TAACTACTG ATAAAAATAATAAAG TERM 936 1772103 - 1772086 - g 79 -8.5 -3.76232 | opp_overlap 1772086, overlap 1772095 GTTTGAAATAGATAA TGAGACA GAGA TGTCTCA TCCTATACACATTCA Fphi_1641 1770908 - 1772326 + | hypothetical protein Fphi_1640 1773407 - 1772316 - | transcriptional regulator-like protein TERM 937 1772624 - 1772650 + gF 91 -2.4 -6.28401 | opp_overlap 1772624, overlap 1772625 CAAGCAACATAAGAT TTTGTTTAAC AATTTCA GTTATACAAA TTTTTTTATTTTTTG TERM 938 1773808 - 1773790 - gH 73 -9 -2.57132 | overlap 1773789 1773799 TCTTCTCCTGAGAAT CTTCTAAA ATA TTTAGAAG CTAAATAGCGAAAAA Fphi_1918 1773292 - 1773816 + | peroxiredoxin, AhpC-TSA family protein TERM 939 1773815 - 1773799 - fH 72 -6.7 -4.12198 | overlap 1773790 1773789 GAGAATCTTCTAAAA TATTTAG AAG CTAAATA GCGAAAAATGGAGTC Fphi_1642 1773835 - 1774449 + | short chain dehydrogenase Fphi_1643 1774611 - 1776044 + | catalase Fphi_1644 1776228 - 1776569 + | hypothetical protein Fphi_1645 1776605 - 1777075 + | glutathione peroxidase Fphi_1646 1777124 - 1778290 + | hypothetical protein Fphi_1647 1778287 - 1779357 + | enolase superfamily protein Fphi_1648 1779373 - 1780020 + | hypothetical protein Fphi_1649 1780451 - 1781914 + | YjeF-related protein Fphi_1650 1782057 - 1783049 + | hypothetical protein TERM 940 1783919 - 1783940 + GF 71 -7.5 -3.5399 | opp_overlap 1783933 ACAATACGGCAATTT TATTTATCA AAGA TGATAAATA TTATCTGGGTGTGAT Fphi_1651 1783021 - 1784220 + | hypothetical protein Fphi_1652 1784514 - 1785971 + | hypothetical protein TERM 941 1786522 - 1786502 - g 71 -5.5 -4.47551 | AGCTAAGTTAGAAAA GTTTGAAAA ACA TATTCAAAC AATCAAGCAATATAA Fphi_1653 1786011 - 1786622 + | hypothetical protein Fphi_1654 1786626 - 1787630 + | hypothetical protein Fphi_1655 1787611 - 1787883 + | hypothetical protein Fphi_1656 1789267 - 1788467 - | hypothetical protein TERM 942 1788634 - 1788650 + g 76 -4.5 -5.14698 | CATGTACAGCTCCAT CAATTTT GAT AAGATTG TTTTCTTTTAGATTT TERM 943 1789262 - 1789237 - G 74 -3.4 -5.24647 | opp_overlap 1789242, overlap 1789242 ATATAGAAAATAAAA CAAAACTAAG AAAAAA CTTAGTTTTT AGCATGAGATTTAAT TERM 944 1789257 - 1789242 - G 77 -3.3 -5.40279 | opp_overlap 1789242, overlap 1789237 GAAAATAAAACAAAA CTAAG AAAAAA CTTAG TTTTTAGCATGAGAT Fphi_1657 1789852 - 1789277 - | hypothetical protein Fphi_1658 1790285 - 1791346 + | radical SAM family protein Fphi_1659 1792498 - 1791383 - | penicillin V acylase-like protein TERM 945 1792097 - 1792113 + g 72 -8.1 -3.51411 | overlap 1792093 TACAGCACTATTCAC TATCTGA TAC TCAGATA TTAATTTAAGAGCAT Fphi_1660 1792577 - 1792828 + | glutaredoxin like protein TERM 946 1793150 - 1793134 - g 75 -7.3 -4.11897 | AGAAAGTCAGATAAA GCTCTAC TGT GTAAAGC AGATACTCTGTGGCT Fphi_1661 1792825 - 1793274 + | thioesterase superfamily protein Fphi_1662 1793642 - 1793289 - | hypothetical protein Fphi_1663 1794423 - 1793671 - | rRNA methyltransferase TERM 947 1794589 - 1794576 - g 70 -3.7 -4.98857 | opp_overlap 1794576 ATGCAACGAGAAAAA GGTGC TTAT GCTCC AGTTTTTTATCCTGC TERM 948 1794621 - 1794639 + G 74 -3 -5.252 | overlap 1794622 ATTATTTTAGCTATT GTCCTGTC ATT GTCAGGAA TTTTTTATCCGAATC TERM 949 1795783 - 1795805 + G 70 -2 -5.26918 | CACTATTATCAGTTT TGGCAGTATT TTT AATAGTGACA TTTTTTGTAACATCT Fphi_1665 1794561 - 1796507 + | betaine/carnitine/choline transporter (BCCT) family protein Fphi_1664 1796979 - 1796500 - | tryptophan-rich sensory protein Fphi_1666 1797107 - 1797961 + | bifunctional methionine sulfoxide reductase B/A protein Fphi_1667 1799174 - 1797981 - | drug:H+ antiporter-1 (DHA1) family protein Fphi_1668 1800428 - 1799289 - | protein-disulfide isomerase TERM 950 1800460 - 1800470 + r 70 -6.8 -3.97139 | AATTATTTTTTCTGA GCAG CTA CTGC TTGTTGTTGAAATTG Fphi_1669 1800737 - 1800447 - | hypothetical protein Fphi_1670 1801908 - 1800808 - | 4Fe-4S ferredoxin Fphi_1671 1802246 - 1801911 - | hypothetical protein Fphi_1672 1802351 - 1802683 + | hypothetical protein TERM 951 1803403 - 1803423 + G 70 -6.9 -3.75378 | ACAGTTTTTTTTGAA GTGTTTAGT TGG ACAAAACAC TTATGTTATGGCCGT Fphi_1673 1802702 - 1804762 + | DNA/RNA helicase superfamily I protein Fphi_1674 1805214 - 1804765 - | BNR/Asp-box repeat-containing protein TERM 952 1805096 - 1805112 + g 100 -10.1 -5.10208 | ATTTCCGCTTCTTTT GCGGCTG CTT CAGCTGC TTTTTCTTCAAGTTC TERM 953 1807609 - 1807599 - g 76 -4 -5.22039 | GCTAAACTTAAAAAA GATA TTT TATC AGGAGCAAATAGCGA Fphi_1675 1805376 - 1807973 + | alanine--tRNA ligase Fphi_1676 1807977 - 1809365 + | hypothetical protein Fphi_1677 1809370 - 1810746 + | leucyl aminopeptidase Fphi_1678 1810836 - 1811801 + | transaldolase B Fphi_1679 1811815 - 1812297 + | hypothetical protein Fphi_1680 1812374 - 1813120 + | hypothetical protein Fphi_1681 1813114 - 1815129 + | UvrD/REP superfamily I DNA/RNA helicase Fphi_1682 1815247 - 1816077 + | hypothetical protein TERM 954 1816078 - 1816088 + T 91 -4 -5.98675 | opp_overlap 1816078 TATTTAAACGGATAA GATA TAT TATC TTTTTTATTTTTCTA Fphi_1683 1816746 - 1816093 - | peroxiredoxin, putative TERM 955 1816845 - 1816867 + H 75 -9.4 -2.59748 | opp_overlap 1816845 1816856 AACTTTTTGGAATTA CTTTTTATAA ACT TTATAAAAAG TGCGTTGTAAGAATG TERM 956 1816867 - 1816845 - H 75 -9.4 -2.71263 | opp_overlap 1816845, overlap 1816856 AACTTTTTGGAATTA CTTTTTATAA ACT TTATAAAAAG TGCGTTGTAAGAATG TERM 957 1816947 - 1816971 + H 75 -8.7 -3.35679 | overlap 1816944 1816942 AATGACTTGCTCTTT GCTATGCAAGA TAA TTTTGTATAGC TTATCAGTAAAAAAC Fphi_1684 1817018 - 1817353 + | 30S ribosomal protein S6 Fphi_1685 1817369 - 1817587 + | 30S ribosomal protein S18 Fphi_1686 1817606 - 1818061 + | 50S ribosomal protein L9 TERM 958 1818108 - 1818124 + F 86 -4.4 -5.76633 | opp_overlap 1818102 1818108, overlap 1818100 TATTTAATATAAAAA CCATGT GTTAG GCATGG TTTTTTTGTATATAA Fphi_1687 1818148 - 1819542 + | replicative DNA helicase Fphi_1688 1819567 - 1820679 + | radical SAM superfamily protein TERM 959 1821371 - 1821350 - g 71 -6.7 -4.21773 | GGTGAATATAAAGAA TGCTATAAA GTCA TTTACAGCA TGAAGAATGATCCTC Fphi_1689 1820669 - 1821562 + | type IV pili, pilus assembly protein Fphi_1690 1821555 - 1822370 + | 16S rRNA pseudouridine synthase TERM 960 1822505 - 1822493 - g 72 -4.9 -4.71223 | TTAGAAGACACAAAA TCTTT AGA AAAGA GCTTGGAGATTATCT TERM 961 1822688 - 1822648 - g 83 -6.4 -4.85653 | opp_overlap 1822651 1822653 TATATATAAAACAAA CAATATTAATTCTTTCCA TAGTT TAGAAGGAATTAATCTTG CTGAAAATGATTTTA Fphi_1691 1822370 - 1822789 + | hypothetical protein Fphi_1692 1822770 - 1823222 + | ribosomal-protein-alanine acetyltransferase Fphi_1693 1823405 - 1824046 + | hypothetical protein Fphi_1694 1824113 - 1824550 + | hypothetical protein TERM 962 1825062 - 1825042 - g 73 -7.7 -3.74224 | TGCAAATTATGCAAA TATTAGCAG ATG CTACTAATA AAATATCTGAAGGTG Fphi_1695 1824639 - 1825616 + | polyprenyl synthetase family protein Fphi_1696 1826440 - 1825637 - | peptidyl-prolyl cis-trans isomerase family protein Fphi_1697 1827254 - 1826454 - | ATPase Fphi_1698 1827663 - 1827238 - | thioesterase family protein Fphi_1699 1828284 - 1827673 - | hypothetical protein Fphi_1700 1829741 - 1828284 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 963 1829869 - 1829887 + H 71 -8.2 -3.17475 | overlap 1829834 1829826 1829868 CCTATAATTTTGTTA CAGGACTT ATA AAGTTCTG GTTTGTTGGGTTTAT Fphi_1701 1829933 - 1830130 + | 30S ribosomal protein S21 Fphi_1702 1830193 - 1830639 + | hypothetical protein TERM 964 1831791 - 1831767 - g 70 -7.2 -3.81929 | opp_overlap 1831776, overlap 1831770 CAATAATTCATTAAA GAAGTCTCAG TCTGT CTTAGACTTC ATAATAAACTATATC Fphi_1703 1830658 - 1832478 + | DNA primase Fphi_1704 1832503 - 1834239 + | RNA polymerase sigma-70 factor Fphi_1705 1834336 - 1834731 + | hypothetical protein Fphi_1706 1835371 - 1834754 - | lipoyltransferase Fphi_1707 1835669 - 1835385 - | hypothetical protein Fphi_1708 1837031 - 1835697 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 965 1836471 - 1836451 - G 75 -9.8 -2.64375 | opp_overlap 1836441, overlap 1836441 AAAAGTGCCATATCA TGAGCAGT TGTAT ACTGCTCA CCACCAGGTAATCCA Fphi_1709 1837188 - 1837709 + | inorganic diphosphatase TERM 966 1838127 - 1838139 + G 71 -6.3 -4.26327 | GCTTATATGGGTGAC GATCT ACC AGATC TTATTTTGATGAATA Fphi_1710 1837797 - 1838336 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Fphi_1711 1838345 - 1838980 + | hypothetical protein TERM 967 1839378 - 1839360 - g 83 -6 -5.1615 | overlap 1839349 TCAACAGCTAAAAAA CTTTGTGC TGA GCAAAAAG AGTGTAACTTTATAT Fphi_1712 1838967 - 1839842 + | hypothetical protein Fphi_1713 1839861 - 1840592 + | ABC transporter, ATP-binding protein Fphi_1714 1840625 - 1841221 + | fumarylacetoacetate hydrolase TERM 968 1842783 - 1842769 - g 73 -3.6 -5.04222 | TAACTAAAGCAAAAA CAAAAT GGT ATTCTG AGTTGTACGTGCCTG Fphi_1715 1841229 - 1843061 + | S-methyl-5-thioadenosine phosphorylase TERM 969 1843806 - 1843829 + G 76 -2.5 -5.5353 | gap 1 AGTATCCCGAGTTTA GCTTTA-GAC GTCGA GTCATAGAGC TTTTTTGTTAGTCTA Fphi_1716 1843064 - 1843840 + | tRNA pseudouridine synthase A Fphi_1717 1843974 - 1845524 + | bifunctional GMP synthase/glutamine amidotransferase protein Fphi_1718 1845607 - 1847463 + | 1-deoxy-D-xylulose-5-phosphate synthase Fphi_1719 1847582 - 1848205 + | GDSL-like lipolytic enzyme Fphi_1720 1848819 - 1848217 - | CBS domain-containing protein TERM 970 1848500 - 1848512 + g 78 -7.7 -4.19336 | overlap 1848503 1848509 GCGGGTTTTGTGCCG GAGCT TCT AGCTC TTTCTTGAAGTGCTT Fphi_1721 1849037 - 1850083 + | Holliday junction DNA helicase B Fphi_1722 1850854 - 1850099 - | hypothetical protein TERM 971 1850924 - 1850902 - R 76 -8.6 -3.70081 | opp_overlap 1850902 1850906 ATACAATTGTAACAA GATATACAAA ATA CTTGTATATC TAAATTCTACAAGAT Fphi_1723 1851144 - 1850941 - | XRE family transcriptional regulator Fphi_1724 1851691 - 1851155 - | hypothetical protein TERM 972 1851743 - 1851780 + H 100 -16.1 -4.55697 | opp_overlap 1851740 TATTTTAGATTATTT TTATTGTTTATCAATAA TTAG TTATTGATAAACAATAA TTTATTTGTGAGAAT Fphi_1725 1851822 - 1852769 + | hypothetical protein Fphi_1726 1854038 - 1852779 - | sugar:cation symporter family protein TERM 973 1853159 - 1853148 - G 77 -3 -5.43329 | AAAAACAAAAGAAAA TATG ATGG CATA AAATAGAAGGGCATA TERM 974 1854488 - 1854478 - g 74 -5.4 -4.82901 | opp_overlap 1854485 TCTTTGGTATAAAAA GAAC TAT GTTC TTAGGAGCTATATTT TERM 975 1855668 - 1855678 + G 71 -5.4 -4.5442 | GTTGCGATAGTTTTT GCAA TAA TTGC TTTTGTAATTGGCAA Fphi_1727 1854249 - 1855721 + | alkaline phosphatase Fphi_1728 1855738 - 1856631 + | drug/metabolite transporter superfamily protein Fphi_1729 1856717 - 1857730 + | phenylalanyl-tRNA synthetase subunit alpha TERM 976 1857815 - 1857803 - g 73 -7.7 -3.71913 | overlap 1857801 GTGATACTCAAAATA GCCAA AAT TTGGC AGATACTTTAACTTT TERM 977 1858482 - 1858494 + G 72 -2.7 -5.29782 | AAGAAGAAGTGGTAT TGGAA GTA TTTCA TTTTTTGTAGATGTG Fphi_1730 1857751 - 1860123 + | phenylalanine--tRNA ligase Fphi_1731 1860584 - 1860159 - | regulatory protein Fphi_1732 1860723 - 1861940 + | hypothetical protein Fphi_1733 1861943 - 1862689 + | zinc (Zn2+)-iron (Fe2+) permease (ZIP) family protein Fphi_1734 1863697 - 1862711 - | lipoprotein Fphi_1735 1865277 - 1863847 - | cardiolipin synthetase Fphi_1736 1866772 - 1865342 - | cardiolipin synthase TERM 978 1865963 - 1865953 - G 79 -4 -5.45652 | AGTCTGAACAAAAAA CTTT CAG AAAG TGGACTACAGATTCT TERM 979 1866643 - 1866625 - G 73 -3.8 -5.1963 | opp_overlap 1866625 1866632 1866635, overlap 1866628 1866635 TGTAAGGAATAAAAA GTATAGCT AAT AGCCATGC TAATATATTTGATGG Fphi_1737 1868061 - 1866826 - | major facilitator superfamily metabolite/H(+) symporter TERM 980 1868837 - 1868861 + G 73 -8 -3.65351 | gap 1, opp_overlap 1868836 CCATCCGTGAAAATG CTGACA-ATGG AAAA CCATATGTCAG TTTAGATAAAGATGA Fphi_1738 1868128 - 1868985 + | nucleotide-binding protein Fphi_1739 1869002 - 1869568 + | deoxycytidine triphosphate deaminase Fphi_1740 1871596 - 1869938 - | transposase X TERM 981 1871395 - 1871411 + g 73 -8.1 -3.61438 | opp_overlap 1871390 1871389 1871397, overlap 1871393 AATCATCAATCATCA TATTCCA AAA TGGAATA TATTGTTTACTCTCA Fphi_1741 1872561 - 1871617 - | integrase, catalytic region Fphi_1742 1873345 - 1872629 - | hypothetical protein TERM 982 1873287 - 1873309 + g 73 -9.3 -2.84059 | opp_overlap 1873286, overlap 1873283 1873284 TGACTAAAATATGAT TTAGAGTCA TTAGT TGACTCTAA TGCTTCATCTATATG Fphi_1743 1873848 - 1873435 - | hypothetical protein Fphi_1744 1874414 - 1873845 - | invertase/recombinase like protein Fphi_1745 1874593 - 1874676 + | ArsB arsenite/antimonite exporter Fphi_1746 1874690 - 1875109 + | arsenate reductase TERM 983 1875235 - 1875259 + F 81 -7.3 -4.64598 | opp_overlap 1875238 TAGTTGCTATTTAAG TGATAAGCATA TGT TGTGCTTATTA TTTTTCAAATAATTC TERM 984 1875317 - 1875331 + G 75 -8.6 -3.3879 | overlap 1875314 TTAATAATTTTTTAT TACCAC AAG GTGGTA TATTTAGAGTAGATT Fphi_1747 1875289 - 1876869 + | sulphate transporter Fphi_1748 1877247 - 1876912 - | hypothetical protein Fphi_1749 1878192 - 1877359 - | mechanosensitive ion channel family protein Fphi_1750 1879145 - 1878201 - | integrase, catalytic region Fphi_1919 1879605 - 1879213 - | putative lipoprotein TERM 985 1879390 - 1879416 + g 77 -10.4 -2.52896 | opp_overlap 1879394, overlap 1879395 GGCTATATGTGCTAA CTTATCAAAAAT TTT GTTTTTGATAAG TGACTTACCCAATGA Fphi_1751 1880177 - 1879626 - | rare lipoprotein B family protein TERM 986 1880061 - 1880046 - G 74 -6.2 -4.61199 | ATTGTAGATATAAAA CTTAGT ATCA ACTAAG CTACTAAAATTTCCA Fphi_1752 1882628 - 1880187 - | leucyl-tRNA synthetase Fphi_1753 1883196 - 1882786 - | hypothetical protein Fphi_1754 1883777 - 1883196 - | hypothetical protein TERM 987 1883840 - 1883828 - g 75 -4.8 -4.88293 | AATGGCAAAAATAAA TGCC GCAGT GGCA ATAATTTTAGATGAA Fphi_1755 1883814 - 1884224 + | mutator protein Fphi_1756 1884767 - 1884336 - | hypothetical protein TERM 988 1884484 - 1884494 + g 86 -2.6 -5.86965 | TATACAAGTGAAGCT TTAA ATT TTAA TTTTTTTTCGTGCGT Fphi_1758 1884946 - 1886274 + | amino acid transporter (AAT) family protein Fphi_1757 1886681 - 1886259 - | hypothetical protein Fphi_1759 1887000 - 1886674 - | thioredoxin Fphi_1760 1887689 - 1887003 - | putative lipoprotein Fphi_1761 1888925 - 1887780 - | SufS activator complex, SufD subunit Fphi_1762 1889688 - 1888939 - | SufS activator complex, SufC subunit Fphi_1763 1891168 - 1889723 - | cysteine desulfurase activator complex subunit SufB TERM 989 1890343 - 1890353 + g 71 -6.8 -4.16943 | TACCTTCTTTATCTC CTGG ATA CCAG TTTTGCACTGTAGAG TERM 990 1890723 - 1890736 + g 70 -2.3 -5.27938 | opp_overlap 1890723 GGACAAAAAATAACT CCAGC TTCA GCTAG TTTTTCTTTGAAAGT Fphi_1764 1891582 - 1891172 - | transcriptional regulator TERM 991 1892710 - 1892699 - g 70 -4.4 -4.82901 | TTGGTGCCAGAAAAA CTGT AGCA ACAG TGAATAGTTCAGAAT Fphi_1765 1891735 - 1893108 + | potassium transporter peripheral membrane component TERM 992 1894014 - 1894029 + G 71 -3.2 -5.18995 | opp_overlap 1894014, overlap 1894016 AGTTTATCTAGAAAG CTTAGG TATA CCTATG TTTTTCTATTATGTT Fphi_1766 1893178 - 1894596 + | amino acid antiporter TERM 993 1894686 - 1894672 - g 70 -4.4 -4.8269 | opp_overlap 1894672 CACAATCATTAAAAA TTATAA AAC TTATAA ATTTATCATTAGATT Fphi_1767 1894596 - 1895522 + | hypothetical protein Fphi_1768 1895815 - 1895597 - | translation initiation factor IF-1 Fphi_1769 1895970 - 1896812 + | hypothetical protein Fphi_1930 1896809 - 1897075 + | hypothetical protein Fphi_1770 1897156 - 1898532 + | signal recognition particle protein TERM 994 1898586 - 1898576 - g 70 -4 -4.8667 | opp_overlap 1898576 GATAGGTGATAAAAA CTTT GAT AAAG TTTCTAATATAAATA Fphi_1771 1898559 - 1899671 + | phospho-2-dehydro-3-deoxyheptonate aldolase Fphi_1772 1899690 - 1900010 + | Bor lipoprotein Fphi_1773 1899994 - 1900302 + | Iss Fphi_1774 1901155 - 1900568 - | NADPH-quinone reductase (modulator of drug activity B) TERM 995 1900947 - 1900932 - G 73 -9 -3.28745 | overlap 1900927 TTTTTAACAATCCAA GGTGGA CCCA TCCACC AACCTGGCATTTGAT Fphi_1775 1902274 - 1901174 - | hypothetical protein TERM 996 1902064 - 1902082 + g 79 -5.3 -5.06451 | gap 1, opp_overlap 1902064 GAGGGATTAGATAAA CATC-GCC TTTT GGCTGATG TTTTTTGAAATACTC Fphi_1776 1902456 - 1903232 + | DNA-(apurinic or apyrimidinic site) lyase Fphi_1777 1903236 - 1903967 + | hypothetical protein Fphi_1778 1904013 - 1904516 + | kinase-like protein TERM 997 1904524 - 1904546 + G 75 -5 -4.96468 | opp_overlap 1904524 AATATTAATGAAGCA TAAATTACTT TAT AAGTTATTTA TTTTATTTGCATTTC Fphi_1779 1904516 - 1905235 + | hypothetical protein Fphi_1780 1905271 - 1906629 + | glutathione reductase Fphi_1781 1906639 - 1906959 + | hypothetical protein TERM 998 1907056 - 1907074 + F 74 -6.8 -4.34263 | TCTATGATGAATTTT TGACCTTT TTC AAAGGTTA TTTATATTGTTCAAA Fphi_1782 1907104 - 1908639 + | alkaline phosphatase Fphi_1783 1909977 - 1908640 - | ATP-dependent RNA helicase Fphi_1784 1910109 - 1910729 + | GTP cyclohydrolase I TERM 999 1910809 - 1910819 + G 70 -4 -4.85396 | ATATTTGCAACAGGC TATC TTA GATA TTTTGTTATCATTGT Fphi_1785 1910737 - 1911432 + | hypothetical protein TERM 1000 1911790 - 1911777 - g 70 -3.8 -4.99972 | opp_overlap 1911777 ACAAAATACTAAAAA CCCA AATGAA TGGG TTGATATCATCGAAT Fphi_1786 1911532 - 1911951 + | hypothetical protein TERM 1001 1912294 - 1912270 - g 100 -13.1 -4.14725 | opp_overlap 1912275 1912277 TAGTCAAACTAGAAA CTTAATAGCTA ATC TAGCTATTAAG TACCAGATAATTGTT Fphi_1787 1911992 - 1912921 + | carbon-nitrogen family hydrolase Fphi_1788 1912992 - 1914056 + | aldo/keto reductase family protein TERM 1002 1914429 - 1914415 - g 79 -8.6 -3.85817 | ACCTTGGGCTAGAAA TGAGGA GAA TCCTCA GATAAATCGTGAAAA Fphi_1789 1914128 - 1915201 + | aldo/keto reductase family protein Fphi_1790 1915271 - 1916431 + | major facilitator transporter Fphi_1791 1916986 - 1916432 - | para-aminobenzoate synthase component II Fphi_1792 1918751 - 1916988 - | chorismate binding family protein Fphi_1793 1920114 - 1918744 - | AMP-binding enzyme Fphi_1794 1920195 - 1920548 + | dihydroneopterin aldolase TERM 1003 1921619 - 1921609 - g 83 -6.8 -5.00616 | GGTTTTGGTAAAAAA GCAG ATA CTGC AAAATACTTATTAGA Fphi_1795 1920550 - 1921815 + | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate synthase Fphi_1796 1921828 - 1922748 + | lipase/esterase Fphi_1797 1922765 - 1923265 + | hypothetical protein Fphi_1798 1924553 - 1923267 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 1004 1924895 - 1924883 - g 74 -3.4 -5.32944 | GGCAGAAGCAAAAAA TGCA AAAGA TGCA GGATCCAAAAGATTC Fphi_1799 1924644 - 1925585 + | biotin synthase TERM 1005 1926386 - 1926376 - g 82 -5.4 -5.35354 | GATACAACTAAAAAA CCTT GAA AAGG CTAATGATAATCGAG Fphi_1800 1925579 - 1926697 + | 8-amino-7-oxononanoate synthase TERM 1006 1926727 - 1926709 - g 74 -6.8 -4.30416 | opp_overlap 1926702, overlap 1926702 ATGATCAAGTTAAAA GTAACTTT GCA AAAGCTAC AGATTACTCTAAAAA Fphi_1801 1926684 - 1927418 + | biotin synthesis protein BioC Fphi_1802 1929007 - 1928045 - | biotin-(acetyl-CoA-carboxylase) ligase Fphi_1803 1927422 - 1928102 + | dethiobiotin synthase Fphi_1804 1929915 - 1929031 - | ROK family protein Fphi_1805 1931177 - 1929927 - | fucose: H+ symporter (FHS) family protein TERM 1007 1930943 - 1930925 - G 70 -3.8 -4.87592 | TTAGACAGAATAAAA TTGAACCC AGA GAGCCCAA TAAAAAGGCAAATAA TERM 1008 1931156 - 1931166 + g 90 -4 -5.86061 | opp_overlap 1931156 TCATCACCACAGATA CTAT TAA ATAG TTTTTTTTCATAAAA Fphi_1806 1931446 - 1932186 + | acetoacetate decarboxylase TERM 1009 1932234 - 1932222 - g 72 -4.9 -4.67011 | AATGTCAGTTAAAAA TAAAG TGA CTTTA ATTACTGGAGCTGCA TERM 1010 1932683 - 1932667 - g 73 -3.6 -5.0917 | GCATCAAAAAATAAA GCAGCT TATGT AGCAGC TAAACACGCACAAGT TERM 1011 1932900 - 1932918 + G 74 -6 -4.58685 | opp_overlap 1932900 1932890 TACAACTGTTCAAGA TATTGCTG ATA CTGCAATA TTTTTAGCAGGATTT Fphi_1807 1932208 - 1932990 + | short chain dehydrogenase Fphi_1808 1933050 - 1934717 + | glycosy hydrolase family protein Fphi_1809 1935897 - 1934722 - | flavohemoprotein TERM 1012 1935920 - 1935950 + H 95 -11.5 -3.91473 | opp_overlap 1935920 CTCCATATACTCAAA TTATAATATGCAT TATAT ATGCATATTATAA TTTATACAAATTTAT TERM 1013 1935950 - 1935920 - H 93 -11.5 -3.74077 | opp_overlap 1935920 CTCCATATACTCAAA TTATAATATGCAT TATAT ATGCATATTATAA TTTATACAAATTTAT Fphi_1810 1936003 - 1936425 + | putative transcriptional regulator Fphi_1811 1938135 - 1936435 - | 4-amino-4-deoxy-L-arabinose transferase-like protein TERM 1014 1938099 - 1938083 - G 100 -9.5 -5.07275 | CCATACATACAAAAA GCTACAA TCA TTGTAGC TAAAATTAGCAAAAT Fphi_1812 1939446 - 1938145 - | glutamate-1-semialdehyde-2,1-aminomutase Fphi_1813 1940410 - 1939436 - | glutathione synthetase Fphi_1814 1941352 - 1940414 - | methionyl-tRNA formyltransferase Fphi_1815 1941747 - 1941355 - | hypothetical protein Fphi_1816 1942148 - 1941750 - | hypothetical protein Fphi_1817 1942305 - 1942643 + | ArsR family transcriptional regulator Fphi_1818 1942647 - 1943675 + | ArsB arsenite/antimonite exporter Fphi_1819 1943727 - 1944056 + | putative membrane transporter of cations and cationic drugs, multidrug resistance protein Fphi_1820 1946224 - 1944068 - | 23S rRNA m(2)G2445 methyltransferase TERM 1015 1944472 - 1944483 + g 73 -4.4 -4.86773 | AAGTATTAGACATAT CTAC ACTT GTAG TTTTTGCTCCTTTTA TERM 1016 1945800 - 1945772 - G 81 -6.2 -4.98857 | opp_overlap 1945766 1945774 1945797 1945799, overlap 1945766 1945774 ATTTAAGCATAAAAA CACATTCACATA CTGCT TATGTAAATGTA ATTTTATTATATTAT TERM 1017 1945798 - 1945774 - G 71 -6.6 -4.11322 | opp_overlap 1945774 1945766 1945797, overlap 1945772 1945766 TTAAGCATAAAAACA CATTCACATA CTGCT TATGTAAATG TAATTTTATTATATT Fphi_1821 1946589 - 1947785 + | phage integrase Fphi_1822 1949015 - 1947789 - | hypothetical protein Fphi_1823 1950780 - 1949035 - | hypothetical protein TERM 1018 1949233 - 1949203 - G 70 -7.2 -3.85539 | GATATCTATACCAAA TATTTTACATATTA TAA TAATATCTAAAATA TACAGCCAATCTCCA TERM 1019 1952610 - 1952596 - g 72 -2.9 -5.30616 | GGAGTTAAAGAAAAA GTAAA AAAAA TTTAC GAGGTGCATAAAAAA Fphi_1824 1950865 - 1953543 + | hypothetical protein TERM 1020 1955476 - 1955453 - g 70 -8.4 -3.33589 | opp_overlap 1955457, overlap 1955450 1955451 1955457 AAGCTATAAAAATTA TTAATGATAA AATT TTATCATTAA ATATAGATGGACTTA Fphi_1825 1953697 - 1956789 + | hypothetical protein TERM 1021 1957105 - 1957075 - g 100 -9.1 -5.05079 | overlap 1957076 1957080 AGAATTAGATAAAAA CTCAACTGTTCGG AATTA CCGAACAGTTCAA AATGAAGGTAGTAGA TERM 1022 1957104 - 1957076 - g 86 -10.4 -3.61421 | overlap 1957075 1957080 GAATTAGATAAAAAC TCAACTGTTCGG AATTA CCGAACAGTTCA AAATGAAGGTAGTAG TERM 1023 1957100 - 1957080 - g 89 -11.2 -3.50684 | overlap 1957076 1957075 TAGATAAAAACTCAA CTGTTCGG AATTA CCGAACAG TTCAAAATGAAGGTA TERM 1024 1957588 - 1957568 - g 72 -2.5 -5.2112 | overlap 1957570 AATATCACTAAAAAA GATGTTAGC ATT GCTAAAAAC TACCTGAATGAAGAA TERM 1025 1957779 - 1957761 - g 76 -6.8 -4.59109 | CACATGCTGGAAAAA TTAGCCAT GCA ATAGCTAA AGAAAAAAGCGAAAT Fphi_1826 1956890 - 1957885 + | hypothetical protein TERM 1026 1958151 - 1958141 - g 79 -5.4 -5.12068 | overlap 1958135 GAGATGCAACAAAAA GCTT TTG AAGC CAGAAATAGCCAATA TERM 1027 1958268 - 1958258 - g 79 -5.4 -5.03145 | CAAGGTGTCAAAAAA GCAA TTA TTGC CGTTCCTGAAAGATC TERM 1028 1958565 - 1958551 - g 70 -4.2 -4.81814 | ATCAGCAGAAGAAAA TAACCG CCT CGGTGA GCTTATTCGTAGTAT Fphi_1827 1958054 - 1959979 + | DEAD/DEAH box helicase-like protein TERM 1029 1960517 - 1960494 - g 74 -6.2 -4.58773 | gap 1 CGTACTAAAGTAAAA TTCTCTGAAGA GCA TCTTCA-AGAA GGAATGTTTTTTATT Fphi_1828 1959969 - 1961165 + | hypothetical protein Fphi_1829 1961470 - 1961180 - | XRE family transcriptional regulator Fphi_1830 1961787 - 1961467 - | hypothetical protein TERM 1030 1961811 - 1961826 + r 86 -6.2 -5.26316 | overlap 1961808 AAAAATACTTATTAT GTATCA TATA TGATAC TTTTTTGTAAAATAA TERM 1031 1961856 - 1961845 - R 73 -3 -5.45802 | opp_overlap 1961845 TTTGTAAAATAAAAA TCAA TTTT TTGA TTAGATTAATAATAA Fphi_1831 1962381 - 1961875 - | putative antirestriction protein Fphi_1832 1962912 - 1963118 + | hypothetical protein Fphi_1833 1963204 - 1964547 + | Na+/H+ antiporter NhaA Fphi_1834 1965300 - 1964578 - | hypothetical protein Fphi_1835 1967312 - 1965297 - | hypothetical protein TERM 1032 1967343 - 1967372 + r 75 -7.3 -4.14511 | TCTGAAACGCTAGTA GATTTAGATGACC GCTG GGTTATATAAATC TTTTACAATAGCGTT Fphi_1836 1969082 - 1967832 - | hypothetical protein Fphi_1931 1969275 - 1969075 - | phage transcriptional regulator, AlpA TERM 1033 1969472 - 1969482 + H 72 -6.8 -4.07618 | TTAATTTTTTATAGT GACC TTC GGTC TTTACTTGTTGCGAA Fphi_1837 1969720 - 1969953 + | hypothetical protein Fphi_1838 1970344 - 1970087 - | hypothetical protein Fphi_1839 1971213 - 1970347 - | recombination associated protein TERM 1034 1971299 - 1971277 - R 81 -7.2 -4.64383 | opp_overlap 1971277 AATCATAAAGTAAAA CTATTAAACT ACA AATTTAATAG TTTATATGATTTAAC Fphi_1840 1971794 - 1971285 - | hypothetical protein Fphi_1841 1971883 - 1972875 + | rhodanese sulfurtransferase TERM 1035 1973182 - 1973212 + G 70 -4 -4.85599 | opp_overlap 1973192 CTATGATTATAGAGG GCGGTGAAATCTTT GAA AAAGGTGTCGTTGC TTTTTCTAGAGTACA Fphi_1842 1973007 - 1973933 + | coproporphyrinogen III oxidase TERM 1036 1974342 - 1974326 - g 73 -4.3 -4.8543 | opp_overlap 1974326 CAATGGTCAGAAAAA GCTGCTC AAG AAGCTGC TAAATTCACCTCTGT Fphi_1843 1974017 - 1975069 + | phosphoserine aminotransferase Fphi_1845 1975056 - 1975724 + | cytidylate kinase Fphi_1844 1976025 - 1975711 - | anti-ECFsigma factor, ChrR Fphi_1846 1976132 - 1977742 + | hypothetical protein Fphi_1847 1979268 - 1977778 - | L-aspartate oxidase Fphi_1848 1980134 - 1979271 - | nicotinate-nucleotide diphosphorylase (carboxylating) Fphi_1849 1981169 - 1980144 - | quinolinate synthetase Fphi_1850 1981761 - 1981189 - | guanylate kinase Fphi_1851 1983615 - 1981870 - | DEAD-box subfamily ATP-dependent helicase Fphi_1852 1983959 - 1983681 - | parvulin-like peptidyl-prolyl isomerase domain-containing protein TERM 1037 1985427 - 1985437 + r 74 -4 -5.2015 | CTATTGTTGCTATTA GATA AAC TATC TTTTTATATTCTTGA Fphi_1855 1986881 - 1985499 - | 2-alkenal reductase TERM 1038 1987086 - 1987072 - g 77 -8.6 -3.53018 | overlap 1987070 CTCACAGATTAAATA GACCTT GGC AAGGTC AATCAGAAGAAACAC Fphi_1856 1986972 - 1987997 + | galactose-1-phosphate uridylyltransferase TERM 1039 1988487 - 1988470 - g 75 -8.5 -3.34716 | overlap 1988469 TGAGCTTGCAAAAAT TGCTCAA AAAG TTGAGCA TGAATATATTGGTAC Fphi_1857 1988000 - 1989157 + | galactokinase Fphi_1858 1989940 - 1989185 - | hypothetical protein Fphi_1859 1991163 - 1990219 - | integrase, catalytic region Fphi_1860 1991709 - 1991314 - | histidine triad family protein Fphi_1861 1992454 - 1991702 - | 3-deoxy-manno-octulosonate cytidylyltransferase Fphi_1862 1992635 - 1992447 - | hypothetical protein Fphi_1863 1993900 - 1992635 - | hypothetical protein Fphi_1864 1994624 - 1993995 - | acid phosphatase/phosphotransferase Fphi_1865 1996532 - 1994694 - | excinuclease ABC, C subunit TERM 1040 1996126 - 1996142 + g 74 -2.2 -5.39721 | opp_overlap 1996126 GATATAGATACATAA GGTCCA AAACA TTGACC TTTTTTATATGCTGA TERM 1041 1997211 - 1997197 - g 76 -2.8 -5.4492 | TAGAGATACAAAAAA CAGAAT TTA ATACTG TTGAGAATATTCACA Fphi_1866 1996641 - 1997741 + | ribonuclease D Fphi_1868 1997763 - 1998968 + | drug:H+ antiporter-1 (DHA1) family protein Fphi_1867 1999339 - 1998965 - | hypothetical protein TERM 1042 1999055 - 1999067 + g 81 -7.7 -4.36262 | CTCAAGCACTACTTC TGGAG CTA CTCCA TTTTGATATGCCTCT Fphi_1869 2001496 - 1999409 - | glycine--tRNA ligase Fphi_1870 2001618 - 2002364 + | TatD family hydrolase Fphi_1871 2002368 - 2003417 + | DNA replication and repair protein RecF Fphi_1872 2003429 - 2003719 + | hypothetical protein Fphi_1873 2004241 - 2003720 - | hypothetical protein Fphi_1874 2004632 - 2004270 - | methylation protein-like protein TERM 1043 2004718 - 2004704 - R 100 -7.2 -5.77988 | opp_overlap 2004716 ATATATAGAAAAAAA TAATGG CAC CCATTA AAAGTTAATTAGTGA Fphi_1875 2005731 - 2005042 - | hypothetical protein Fphi_1876 2006107 - 2005742 - | hypothetical protein Fphi_1877 2007189 - 2006275 - | hypothetical protein Fphi_1878 2009143 - 2007200 - | acyl-coenzyme A synthetase/AMP-(fatty) acid ligase TERM 1044 2009250 - 2009232 - R 70 -7.6 -3.44517 | opp_overlap 2009220 2009229 2009227 2009232 2009245, overlap 2009220 2009230 CAATATTTAATAATA TTTATCAA ATA TTGATAAA TGATTATCTACTTTG Fphi_1879 2010117 - 2009254 - | UTP--glucose-1-phosphate uridylyltransferase Fphi_1880 2011272 - 2010133 - | Co/Zn/Cd cation transporter Fphi_1881 2011453 - 2012397 + | integrase, catalytic region TERM 1045 2012431 - 2012409 - T 82 -6.4 -5.1244 | opp_overlap 2012415, overlap 2012403 2012412 CTAGCAATATAAAAA TTATGACTAA TCT TTAGTCATTA CAAGTTTAAATAATA TERM 1046 2012428 - 2012412 - T 73 -8.1 -3.39242 | opp_overlap 2012415, overlap 2012403 2012409 GCAATATAAAAATTA TGACTAA TCT TTAGTCA TTACAAGTTTAAATA Fphi_1882 2012981 - 2012415 - | hypothetical protein TERM 1047 2013226 - 2013243 + rH 100 -8.5 -5.76633 | opp_overlap 2013226, overlap 2013229 CGCCATATATTGAAA GCCTTTA GAAA TAAAGGC TTTTTTTATGTCTAA TERM 1048 2013243 - 2013226 - RH 78 -8.5 -3.74077 | opp_overlap 2013226 2013229 CGCCATATATTGAAA GCCTTTA GAAA TAAAGGC TTTTTTTATGTCTAA TERM 1049 2013349 - 2013376 + rH 73 -8 -3.51411 | overlap 2013344 2013340 2013345 TCCTTATATTTTTTT GTAAAATAATTT TTAT AGATTATTTTAC TTAATTTGAAACGCT TERM 1050 2013396 - 2013425 + rH 95 -10.9 -4.14511 | TTTGAAACGCTAGTT GATTTAGATAGCC CTTA GGCTATATAAATC TTTTACAATAGCGTT Fphi_1883 2016521 - 2015013 - | hypothetical protein Fphi_1884 2014125 - 2015069 + | integrase, catalytic region TERM 1051 2016087 - 2016074 - GT 79 -5.3 -5.08831 | TAATAAAAAAAATAA TTGCA AAAG TGCAA CAAGCTATATGATAT Fphi_1885 2019396 - 2016541 - | restriction endonuclease TERM 1052 2018591 - 2018603 + g 76 -7.7 -3.94393 | GATTTATCAGCTTGT TTGCC TTT GGCAA TTATCTTTGTGATTT TERM 1053 2019377 - 2019395 + g 71 -3.2 -5.11063 | CAATCTTCTTGATAT TGTTGTTT TTC AAATAGCA TTTTTGTTACCTGCT TERM 1054 2019412 - 2019436 + r 100 -10.1 -5.42975 | overlap 2019410 2019409 TTTTGTTACCTGCTT GCATTATGCAA ATT TTGCATATTGC TTTTTATTTGTGTGG TERM 1055 2019450 - 2019474 + r 71 -7.2 -3.8823 | overlap 2019449 GCTTTTTATTTGTGT GGTGTGTGTA TTTTT TGCACATACC TATTTTATACTTCCA Fphi_1886 2020156 - 2019626 - | hypothetical protein TERM 1056 2020192 - 2020212 + r 78 -9.8 -2.59748 | opp_overlap 2020187, overlap 2020187 CCAACAAAATTGTCA TTCTACGG CTTGA CCGTAGAA TCCATTCTCCACCTA Fphi_1887 2020509 - 2020225 - | endonuclease TERM 1057 2020555 - 2020535 - R 78 -9.8 -2.57795 | opp_overlap 2020531, overlap 2020531 TTTATTAGCAATGGA TTCTACGG TCAAG CCGTAGAA TGACAATTATTTTTA Fphi_1888 2020807 - 2020568 - | hypothetical protein Fphi_1889 2022193 - 2021837 - | hypothetical protein Fphi_1890 2020949 - 2021893 + | integrase, catalytic region TERM 1058 2022209 - 2022229 + Tr 80 -9.8 -2.86601 | opp_overlap 2022214, overlap 2022204 ACACTAATCCTGTCA TACTACGG CTTGA CCGTAGTA TCCATTTTTAATAAA TERM 1059 2022666 - 2022648 - TR 78 -8.9 -3.21276 | opp_overlap 2022645 2022648 2022656, overlap 2022646 GCTTCGGCTAGAAGA TTCCGGA TCAAG TCCGGAA TGACTTGTATTTTTG TERM 1060 2022648 - 2022666 + Tr 75 -9.6 -2.72746 | opp_overlap 2022648 2022646, overlap 2022645 2022656 GCTTCGGCTAGAAGA TTCCGGAT CAA GTCCGGAA TGACTTGTATTTTTG TERM 1061 2022749 - 2022729 - TR 78 -9.8 -2.57795 | opp_overlap 2022722, overlap 2022725 TTTATTATCAATGGA TTCTACGG TCAAG CCGTAGAA TGACGATTGCTGTAT TERM 1062 2023812 - 2023825 + Tr 70 -5.3 -4.60041 | ATCATCTTCTTTGAG TAGCT CACG AGCTA TTTTTAGCCGTGGGT Fphi_1893 2024923 - 2024495 - | hypothetical protein Fphi_1894 2025498 - 2024992 - | putative antirestriction protein Fphi_1895 2028052 - 2026031 - | hypothetical protein TERM 1063 2026563 - 2026573 + g 70 -4 -5.00884 | GGCTTCCAATCATTC CAAA AAT TTTG TTTTTTAGCCCAGCT Fphi_1896 2029095 - 2028121 - | tRNA-dihydrouridine synthase TERM 1064 2028258 - 2028272 + g 80 -6.4 -4.7629 | TTCGGATTTCTTTAA CTGCTA CTT TGGCAG TTTTTAGCTTAATGA Fphi_1897 2029930 - 2029085 - | ribosomal protein L11 methyltransferase TERM 1065 2029345 - 2029355 + g 74 -5.4 -4.6635 | TAAAGTGGGTTTTAT TAGC TAC GCTA TTTTCTTGAGCATTT Fphi_1898 2030554 - 2030048 - | hypothetical protein Fphi_1899 2030926 - 2030672 - | hypothetical protein TERM 1066 2031830 - 2031819 - g 73 -4.4 -5.00616 | TTTGGTCCTAAAAAA TGGT TAGA ACCA TATACAACTGTCAAA Fphi_1900 2031051 - 2032067 + | ferrochelatase TERM 1067 2032763 - 2032787 + G 70 -4.3 -4.7373 | opp_overlap 2032748 TCACCATATTTACAC TTTGGTGAGAT ATC ACCTAACCAAA TTTTTAATGCCGTGC Fphi_1901 2032052 - 2033446 + | deoxyribodipyrimidine photo-lyase Fphi_1902 2033618 - 2034805 + | phosphopyruvate hydratase Fphi_1903 2035825 - 2034827 - | aldose 1-epimerase Fphi_1904 2036981 - 2035806 - | P-pantothenate cysteine ligase/P-pantothenoylcysteine decarboxylase Fphi_1905 2038178 - 2036994 - | major facilitator transporter Fphi_1906 2039761 - 2038253 - | amino acid transporter Fphi_1907 2043979 - 2039915 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1068 2042168 - 2042180 + g 74 -3.3 -5.2112 | opp_overlap 2042168, overlap 2042176 ATTCCAATCTTCAAA TGCGC TTT GAGCA TTTTTTAATGCTCTT TERM 1069 2042176 - 2042193 + g 93 -8.5 -4.7416 | opp_overlap 2042168, overlap 2042168 CTTCAAATGCGCTTT GAGCATT TTTT AATGCTC TTTTTGCCATTTTAG Fphi_1908 2044284 - 2043997 - | hypothetical protein Fphi_1909 2044503 - 2044886 + | hypothetical protein Fphi_1910 2045161 - 2044955 - | hypothetical protein Fphi_1911 2045775 - 2045233 - | 3-dehydroquinate synthase