TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.667128 %AT, 1327199 nt, 8031 terms. Intergenic: 0.701563 %AT, H2T: 355267 nt, 2422 terms; T2T: 142592 nt, 1909 terms; H2H: 92973 nt, 1433 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|187930913|ref|NC_010677.1| Francisella tularensis subsp. mediasiatica FSC147, complete genome (length 1893886) dnaA 130 - 1521 + | chromosomal replication initiator protein DnaA TERM 1 1734 - 1750 + G 70 -8.1 -3.19246 | opp_overlap 1732 ATGCAATATAGCAGT TAGTTGT AAC ACAACTA TTAAGTTAGCATTAA dnaN 1558 - 2661 + | DNA polymerase III, beta subunit TERM 2 4619 - 4635 + T 70 -8.7 -2.71731 | opp_overlap 4619, overlap 4621 AGGCAGCTTTAGCAA CAGCAGC AAA GTTGCTG TCGTTAGCCGCTACG TERM 3 4638 - 4658 + T 82 -5.3 -5.45652 | overlap 4643 AGCAAAGTTGCTGTC GTTAGCCGC TAC GCGGTTTGC TTTTTTGTTGCCAGT TERM 4 4643 - 4653 + T 85 -8.2 -4.51301 | overlap 4638 AGTTGCTGTCGTTAG CCGC TAC GCGG TTTGCTTTTTTGTTG sdaC 6051 - 4828 - | serine permease TERM 5 6183 - 6170 - R 74 -5.3 -4.86385 | opp_overlap 6170 ATTGTCAAAAACAAA GCTAT AAAT ATAGC TTTTAATTAAATATT TERM 6 6240 - 6250 + r 75 -4 -5.19879 | overlap 6247 AAGCTGCATTTTAAG TATC CTA GATA TTTTTATCTTTACAA FTM_0005 6615 - 6379 - | hypothetical protein FTM_0006 7112 - 7990 + | 3-hydroxyisobutyrate dehydrogenase family protein pyrB 8924 - 8004 - | aspartate carbamoyltransferase carB 12350 - 9066 - | carbamoyl-phosphate synthase, large subunit TERM 7 10889 - 10900 + g 74 -2.2 -5.54264 | ATTCTTCTTTGCTAT TTGG TAGA CCAG TTTTTTTAAGTCTTT carA 13521 - 12355 - | carbamoyl-phosphate synthase, small subunit FTM_0010 13937 - 14992 + | histidine acid phosphatase tmpT 15796 - 15116 - | thiopurine S-methyltransferase pyrC 15928 - 17274 + | dihydroorotase FTM_0013 18321 - 17302 - | regulatory protein, ArsR FTM_0014 18592 - 18834 + | hypothetical protein FTM_0015 18881 - 19159 + | hypothetical protein TERM 8 19226 - 19246 + T 100 -14.1 -2.52464 | GCTAATGTGCTGATT CCCCTTCAA ATA TTGAAGGGG TGGCTTGCGAAGCAA FTM_0017 21267 - 20215 - | hypothetical membrane protein FTM_0018 22219 - 21254 - | HlyD family secretion protein FTM_0019 22715 - 22308 - | hypothetical membrane protein FTM_0020 22841 - 23710 + | transcriptional regulator, LysR family FTM_0021 24337 - 23711 - | soul domain protein TERM 9 24861 - 24849 - g 71 -3.4 -5.11033 | opp_overlap 24849 GATAAGGTCAAAAAA GTTG ATGAG CAAC TTTATCCAGCGATAA FTM_0022 24480 - 25028 + | chorismate mutase TERM 10 27027 - 27044 + F 74 -7.1 -3.90298 | GCTATTGTGCGTCTC TCTAAAG GATC CTTTAGA TTATATTTCATTGGG TERM 11 27719 - 27709 - f 80 -6.8 -4.72272 | overlap 27714 CCTCTCCAGCAAAAA GACC ACT GGTC GAGTCTAGACCAATC TERM 12 28021 - 28047 + F 70 -8.2 -3.13033 | opp_overlap 28029, overlap 28020 28029 28034 28045 TTTGGTTAATCTCTA CTAAAAAATCTA TGA TAGATTTCTTAG ATTTATCTATTGATG TERM 13 28039 - 28029 - f 72 -4 -5.14965 | opp_overlap 28029 28021 28020 28034 ATCTCTACTAAAAAA TCTA TGA TAGA TTTCTTAGATTTATC TERM 14 29293 - 29279 - g 84 -6.4 -5.03314 | opp_overlap 29279 29278 TTGACCCCTAAAAAA GCCAAA GAG CTTGGC GTTGATTACATTATT pyrF 28727 - 29371 + | orotidine-5'-phosphate decarboxylase pyrD 29373 - 30119 + | diyroorotate dehydrogenase TERM 15 30146 - 30158 + T 70 -6.3 -4.08945 | TGTTTGGTTTCACTA CTTAC TGC GTAAG TTTTAGCGACATACT dtd 30860 - 30381 - | D-tyrosyl-tRNA(Tyr) deacylase TERM 16 30489 - 30503 + g 86 -5.8 -5.52079 | opp_overlap 30488 TCTTCTAAAAATATT TTCAAA CTC TTTGAA TTTTTCTTTTGCTAT TERM 17 30882 - 30868 - R 73 -5.8 -4.67552 | opp_overlap 30868 30866 30877 TGTATCAAAAAATAA CTTATA CAG TATAAG TCTTATAGTAATTTT FTM_0028 33790 - 32312 - | beta-fructofuranosidase TERM 18 32375 - 32387 + g 78 -2 -5.60689 | TTGGTTTACAGCTGA TACT CTCAT AGTA TTTTTTATTGTATCA FTM_0030 36257 - 35592 - | nitroreductase FTM_0031 36660 - 37352 + | hypothetical protein FTM_0032 38554 - 37349 - | hydroxy/aromatic amino acid permease TERM 19 38002 - 38018 + g 73 -3.7 -5.1417 | overlap 38003 GTATTGGAAACGCTG CCCAAAT AAA ATTTGGA TTTTTAATTTTATAG gidB 38663 - 39271 + | methyltransferase GidB TERM 20 39521 - 39504 - g 75 -7.1 -4.21607 | opp_overlap 39504 GTCACGGAAGATAAA GCATATT GTTA AATATGC TAGTTCAATTCAAAG FTM_0034 39268 - 39936 + | hypothetical protein FTM_0035 40813 - 39929 - | hypothetical membrane protein TERM 21 40320 - 40334 + g 73 -8.6 -3.17797 | opp_overlap 40319 40322 ATAGTCATCATAATC CACCAA GGA TTGGTG TTAGGTATATATAGA FTM_0036 41911 - 41015 - | transcription regulator, LysR family TERM 22 42383 - 42405 + G 81 -7.8 -4.39568 | opp_overlap 42389, overlap 42389 AATTTGGTTGCTGCT GAGAAAGCTA AAT TAGCTTTATC TTTTGCTATATCGCT TERM 23 42389 - 42399 + G 71 -5.4 -4.49352 | opp_overlap 42389, overlap 42383 GTTGCTGCTGAGAAA GCTA AAT TAGC TTTATCTTTTGCTAT FTM_0037 42014 - 43150 + | drug:H+ antiporter-1 (DHA1) family protein FTM_0039 45699 - 46295 + | phosphoheptose isomerase FTM_0040 46303 - 46659 + | outer membrane lipoprotein rpsT 47005 - 46733 - | ribosomal protein S20 TERM 24 46846 - 46856 + g 73 -4 -5.13722 | opp_overlap 46846 CTAATATAGGAACAA CTTT AGC AAAG TTTTCTTTTGCTGCC TERM 25 47255 - 47242 - H 91 -5.3 -5.68438 | TTATTAAATAAAAAA CTACT TCTT AGTAG CAAAAAGAGCTTAAA TERM 26 47840 - 47856 + G 72 -9.5 -2.65884 | overlap 47839 AAGGTGATGTTAATG CAAAGCT GCA AGCTTTG ATTATAGATTCATGG lepA 47275 - 49068 + | GTP-binding protein LepA trmU 49074 - 50153 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase FTM_0044 51150 - 50173 - | lipoprotein, putative TERM 27 50995 - 51011 + g 70 -8.1 -3.29273 | opp_overlap 50994 50991, overlap 50994 TCTCTTATCAATTAG CACAAAA AGT TTTTGTG TCTTATCGTAATAGA FTM_0045 51762 - 51244 - | peptide deformylase ribH 52208 - 51765 - | 6,7-dimethyl-8-ribityllumazine synthase FTM_0047 53429 - 52218 - | riboflavin biosynthesis protein ribAB ribC 54027 - 53422 - | riboflavin synthase, alpha subunit ribD 55087 - 54020 - | riboflavin biosynthesis protein RibD TERM 28 55741 - 55758 + H 70 -4.3 -5.00884 | opp_overlap 55735 55741 55752 AGCAATGCATCTAAA TTTTTTA GAAA TAAAAAA TTTTTTAGCAAGCAT TERM 29 57332 - 57322 - H 75 -4 -5.2197 | opp_overlap 57322 TACAAAAATCAAAAA TATG CAG CATA TTTATTTTACTAATC TERM 30 57377 - 57346 - H 70 -8.4 -3.16881 | gap 1, opp_overlap 57351 57351 57352 57354, overlap 57351 TATTTATTTTACTAA TCAAAG-TATTATAA ATA TTATAATAACTTTGA AGTTGGCGTATTAAA TERM 31 57759 - 57789 + G 71 -7.7 -3.57615 | opp_overlap 57759 ATTCAATGAATATGA GTGGCAGTGTAAA AGATA TTTACAATGCTAC TTTAAAAGCTGTTCA FTM_0052 57620 - 58012 + | hypothetical membrane protein FTM_0053 58033 - 58443 + | hypothetical membrane protein TERM 32 58817 - 58801 - f 71 -3 -5.31275 | overlap 58803 GGCGATGAGAAAAAA TCTGCT GATTT AGCAAA CTCAATAACAAAAAA TERM 33 59349 - 59365 + G 82 -4.4 -5.5112 | gap 1 CATCAATTCATATGG CTGCTGC ATTA GC-GCAG TTTTTTGTTGATAAA eriC 58937 - 60349 + | H(+)/Cl(-) exchange transporter ClcA TERM 34 61382 - 61370 - f 71 -4.9 -4.69487 | opp_overlap 61370 61368 AAATAGAGAAAGAAA TCTTT GAA AAAGA TATTGATATTAGAGA trpB 61853 - 63043 + | tryptophan synthase, beta subunit trpA 63043 - 63852 + | tryptophan synthase, alpha subunit clpB 65278 - 67857 + | chaperone ClpB TERM 35 68133 - 68122 - g 74 -3 -5.22289 | TATGAAATACAAAAA GTTA TTAT TAAC CGCATTAATGACAGC chiB 68108 - 70300 + | chitinase TERM 36 70739 - 70726 - g 71 -5.3 -4.53036 | TTACAAACATCAAAA TTTGC ATTT GCAAA TAGCGAGCAGGAATA purT 70354 - 71514 + | phosphoribosylglycinamide formyltransferase 2 FTM_0065 72844 - 72203 - | hypothetical membrane protein FTM_0066 73081 - 73404 + | ferredoxin-1 FTM_0067 73567 - 74319 + | acyltransferase TERM 37 74866 - 74846 - g 89 -9.1 -4.21194 | GGTGAGTATCCAAAA TTTCATCGC TCA GCAATGAAA TTGGCAACTGTTACG FTM_0068 74333 - 75073 + | acyltransferase FTM_0069 75798 - 75079 - | endonuclease/exonuclease/phosphatase family nhaA 77014 - 75863 - | Na+/H+ antiporter NhaA TERM 38 76713 - 76697 - G 75 -8.7 -3.36655 | TGATAGATATATCAA GCTTGGC ATC GCCAAAC CTGCAAATGCCGCTA TERM 39 77886 - 77874 - g 72 -4.9 -4.73613 | overlap 77878 GTATCACCAATAAAA TCATT CTT AATGA AGACAAAAGAGTTGT FTM_0071 77108 - 78004 + | rieske protein TERM 40 78234 - 78249 + G 76 -4 -5.21709 | CTTTGTGATACCTCT TTTGGC TGTT GCTAAA TTTTTTAGTATCAAA FTM_0072 78070 - 78579 + | B-type cytochrome TERM 41 82272 - 82289 + F 70 -8.5 -3.1203 | opp_overlap 82268 82266 82282 82284, overlap 82270 82268 TAATAACAACAGTCA TTCCCAT GAAG ATGGGAA TCTCTTAAATGGTTG FTM_0076 82386 - 83246 + | galactose mutarotase purB 85014 - 86312 + | adenylosuccinate lyase TERM 42 86317 - 86335 + GF 77 -3.2 -5.4433 | opp_overlap 86317 TTAAGGCGTAAATAT GAAAAAAT ATT ATCTTTTC TTTTTATTTATGTAT FTM_0080 86284 - 86925 + | hypothetical protein FTM_0081 87012 - 88553 + | ATP-binding cassette FTM_0082 88564 - 89634 + | membrane-fusion protein gatC 89717 - 89998 + | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 43 90466 - 90485 + G 78 -7.8 -4.13014 | overlap 90467 TCATCAGGTGGCTCA GCTGCAGC AGTT GCTGCAGG TTTTGCGCCTATAAG TERM 44 90467 - 90484 + G 84 -11.3 -3.07487 | overlap 90466 CATCAGGTGGCTCAG CTGCAGC AGTT GCTGCAG GTTTTGCGCCTATAA gatA 90007 - 91452 + | glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit gatB 91455 - 92876 + | glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, B subunit FTM_0086 92891 - 93298 + | hypothetical protein FTM_0088 96384 - 94855 - | hypothetical membrane protein TERM 45 95285 - 95267 - G 83 -8.2 -4.3586 | GTATTGACATTAAAA CTACCAAT GGT ATCGGTAG GACGCCCCTGACTCT TERM 46 96331 - 96319 - G 72 -6.2 -4.41844 | opp_overlap 96319 AAAACTGTTAGAAAA CCCC ATAAA GGGG GTAATTGATAATACT FTM_0089 97660 - 96470 - | drug:H+ antiporter-1 TERM 47 96972 - 96952 - G 70 -8.4 -3.15742 | opp_overlap 96954, overlap 96951 96969 TTATCATCAAGAAAG CAGCATTT GTGTT AAATGCTG ATTCACCAGCTACCA FTM_0090 98929 - 97676 - | diaminopimelate decarboxylase FTM_0091 100184 - 98922 - | drug:H+ antiporter-1 TERM 48 99408 - 99396 - G 73 -7.7 -3.86916 | TAGCAGTAGACTAAA TGCAG GTG CTGCA TAAATGGCTGCTATG frgA 102110 - 100191 - | siderophore biosynthesis protein TERM 49 101783 - 101794 + g 76 -4.4 -5.06816 | CCTCGATATTTTCAA GAGA TGTT TCTC TTTTTGTTAGGCAAT TERM 50 102126 - 102152 + r 79 -7.5 -4.48299 | opp_overlap 102129 102132 102133 102135, overlap 102127 TTTAAAATCCCTACA TGATAATGATA ACGAA TATCATTATCG TTTATTTAAGTATAA TERM 51 102127 - 102151 + r 74 -8.8 -3.28256 | opp_overlap 102129 102132 102133 102135, overlap 102126 TTAAAATCCCTACAT GATAATGATA ACGAA TATCATTATC GTTTATTTAAGTATA fur 102785 - 102363 - | ferric uptake regulation protein nuoA 102993 - 103391 + | NADH dehydrogenase I, A subunit nuoB 103382 - 103858 + | NADH dehydrogenase I, B subunit nuoC 103861 - 104505 + | NADH dehydrogenase I, C subunit TERM 52 104717 - 104688 - g 86 -10.9 -3.17194 | opp_overlap 104697, overlap 104697 ACTTGCTGAATTTAA GCCATATAACCAA AGTA TTGGTTATATGGA CAGGCTTGATTATGT nuoD 104527 - 105780 + | NADH dehydrogenase I, D subunit nuoE 105790 - 106278 + | NADH dehydrogenase I, E subunit TERM 53 106865 - 106843 - g 77 -4.8 -5.0538 | CTTGAGGGTAAAAAA GGTCGCCCAA GAT TTAAGCCACC ATTTCCTGCATTTAA nuoF 106285 - 107559 + | NADH dehydrogenase I, F subunit TERM 54 107847 - 107835 - g 80 -6.3 -4.83169 | overlap 107838 ACTCGTTCAGAAAAA GCATT GCA AATGC AAAAAGATGTTATGG TERM 55 108044 - 108062 + G 83 -9.6 -3.72893 | GACAAGATGTATTTT GTGTACAC GAT GTGTACGC TTTGGTGAAGAGATC nuoG 107577 - 109943 + | NADH dehydrogenase I, G subunit nuoH 109945 - 110955 + | NADH dehydrogenase I, H subunit nuoI 110969 - 111457 + | NADH dehydrogenase I, I subunit nuoJ 111462 - 112067 + | NADH dehydrogenase I, J subunit nuoK 112060 - 112377 + | NADH dehydrogenase I, K subunit nuoL 112387 - 114396 + | NADH dehydrogenase I, L subunit nuoM 114422 - 116011 + | NADH dehydrogenase I, M subunit TERM 56 117180 - 117196 + G 73 -7.9 -3.83771 | overlap 117191 TTGTGCTATTTTCAA TGGCGGG TAT CCCTCCA TTTGGTGGCTTTATT nuoN 116027 - 117478 + | NADH dehydrogenase I, N subunit FTM_0108 117554 - 117748 + | hypothetical protein hemE 119311 - 120345 + | uroporphyrinogen decarboxylase TERM 57 120515 - 120529 + F 100 -11.4 -4.84527 | opp_overlap 120515 GGAATTTTTTATAAA GGCCCT TTA AGGGCC TTTTTGCTATCTGAA TERM 58 120529 - 120515 - f 100 -11.4 -3.87869 | opp_overlap 120515 GGAATTTTTTATAAA GGCCCT TTA AGGGCC TTTTTGCTATCTGAA FTM_0112 120571 - 121023 + | protein Lpl2691 TERM 59 121414 - 121402 - g 72 -4.9 -4.78572 | TTCTAATGAAGAAAA TCAAA AAT TTTGA AAGAGAAAAGTCAGC nusA 121041 - 122510 + | transcription termination factor NusA TERM 60 123120 - 123095 - g 76 -2.5 -5.5074 | overlap 123107 CAAGCTAAGAAAAAA GCTGCTAAGAA AGTA TTCTCTGAAGC TGTGAATACTAATAC TERM 61 124287 - 124271 - g 95 -8.7 -4.98672 | GGGAAAAAGATAAAA GCAGCTG GTC CAGCTAC ACCTGTTGAAATACT infB 122549 - 125089 + | translation initiation factor IF-2 rbfA 125092 - 125523 + | ribosome-binding factor A hisS 125531 - 126796 + | histidyl-tRNA synthetase TERM 62 128012 - 128025 + G 70 -2.4 -5.22794 | opp_overlap 128012 TATTTCCATATAAAT GCAT ATCATC ATGC TTTTTTAATCCTTGT TERM 63 128046 - 128062 + G 70 -3.7 -4.86773 | overlap 128049 TAATCCTTGTATTTA GCATGAT CGT ATCATTC TTTTTGCTGATTTTA FTM_0117 126803 - 128101 + | major facilitator superfamily FTM_0118 128104 - 129171 + | ATPase rluC 129164 - 130093 + | ribosomal large subunit pseudouridine synthase C FTM_0120 131399 - 130095 - | major facilitator superfamily TERM 64 130877 - 130851 - G 75 -8.1 -3.72324 | gap 1, opp_overlap 130850, overlap 130869 TACTGCGATCAATAA GCTA-GCCACTG AAAA CAGTAGCATAGC CATTTTCCAGTCGCC FTM_0121 131476 - 131907 + | hypothetical membrane protein TERM 65 132396 - 132413 + G 72 -4.9 -4.81852 | overlap 132397 ATCCTAATGTTACTT TTGCTAT GTCA ATAGCAG TTTTCTTCCTTGTGA atpB 131960 - 132751 + | ATP synthase, F0 sector, subunit a atpE 132802 - 133107 + | ATP synthase, F0 sector, subunit c atpF 133153 - 133623 + | ATP synthase, F0 sector, subunit b TERM 66 134003 - 133993 - g 73 -4 -5.03994 | opp_overlap 133985 CGCTACAGATAAAAA TATC TTA GATA GTCTGAAAACTAGTT atpH 133643 - 134167 + | ATP synthase, F1 sector, subunit delta atpA 134186 - 135727 + | ATP synthase, F1 sector, subunit alpha atpG 135742 - 136638 + | ATP synthase, F1 sector, subunit gamma atpD 136648 - 138024 + | ATP synthase, F1 sector, subunit beta atpC 138037 - 138474 + | ATP synthase, F1 sector, subunit epsilon TERM 67 140329 - 140307 - g 83 -7.8 -4.66163 | ACCCTTAGCTAAAAA TGACAAAGAT AAT ATCTATGTCA ATCATAATTATATTG FTM_0130 138685 - 141528 + | hypothetical protein FTM_0131 141874 - 141545 - | glutaredoxin-related protein sodB 142010 - 142588 + | iron/manganese superoxide dismutase family protein FTM_0133 142600 - 142788 + | hypothetical protein ampG 144058 - 142793 - | peptide-acetyl-coenzyme A transporter (PAT) family protein TERM 68 143637 - 143607 - G 72 -9.1 -2.63102 | gap 1, opp_overlap 143598 143607 143606 ATGACTGCTATAGCA TTC-CCTAGAGCTC TTTC GTGCTCTAGGAGAA CTTCTGTTTGGTAAG TERM 69 143607 - 143637 + g 73 -9.1 -2.91269 | gap 1, opp_overlap 143607, overlap 143598 143606 ATGACTGCTATAGCA TTC-CCTAGAGCTC TTTC GTGCTCTAGGAGAA CTTCTGTTTGGTAAG TERM 70 143904 - 143892 - G 71 -3.4 -5.06103 | opp_overlap 143892, overlap 143882 ATAAGGGTCAAAAAA CCAA TATCT TTGG TTTCTATGCCGTTAT gltA 145407 - 144148 - | citrate synthase I TERM 71 144901 - 144925 + g 76 -4.3 -5.055 | GTAAGCCATGGCTGC TATAGTTGCAA TTT TTGCTACGATA TTTTTTGCGACTTCA sdhC 145665 - 146138 + | succinate dehydrogenase, cytochrome b556 subunit sdhD 146114 - 146482 + | succinate dehydrogenase, hydrophobic membrane anchor protein sdhA 146495 - 148288 + | succinate dehydrogenase, flavoprotein subunit sdhB 148306 - 149007 + | succinate dehydrogenase iron-sulfur protein TERM 72 149222 - 149206 - g 74 -9.5 -3.10959 | opp_overlap 149205 149195 149206 149208 CAAGCTCAACAGATA CAGTTCA TGG TGAACTG GTTGATGAGTTTAAA TERM 73 149206 - 149222 + G 72 -9.5 -2.54732 | opp_overlap 149206, overlap 149205 149195 149208 CAAGCTCAACAGATA CAGTTCA TGG TGAACTG GTTGATGAGTTTAAA TERM 74 149631 - 149609 - g 72 -9.2 -2.57018 | overlap 149608 149606 TAGAATAGAAGATAC TGCTGTCATT CCT AGTGACAGCA AAAAATGGATTTTAC TERM 75 149781 - 149760 - g 84 -11.7 -2.97747 | TCTTTACAGCATATA GTCGAGAAA GCTG TTTCTCGAC ATTCAACTCGCTTTA TERM 76 150441 - 150427 - g 82 -8.6 -3.99678 | ATGGTCATAATGAAA CTGATG AGC CATCAG GAACACAGCCACAGA TERM 77 150719 - 150709 - g 82 -5.4 -5.34555 | CTATACCAGAAAAAA CTCT CAA AGAG TTAGCACTGAAGATT sucA 149037 - 151850 + | 2-oxoglutarate dehydrogenase, E1 component TERM 78 152674 - 152660 - g 95 -8.6 -5.24989 | opp_overlap 152662, overlap 152669 CTAGATATGAAAAAA GAGTCA AGA TGACTC GTCTGCGTCAGACTA sucB 151876 - 153345 + | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase apt 153385 - 153912 + | adenine phosphoribosyltransferase TERM 79 155052 - 155030 - g 77 -8.6 -3.70307 | overlap 155028 155039 TTGATGCAACAAACA TTAATCAATG TGC CATTGACTAA GAAAGTGGCACGTGA mrsA 153923 - 155254 + | phosphoglucosamine mutase tpiA 155257 - 156018 + | triosephosphate isomerase TERM 80 156302 - 156256 - g 79 -9 -3.71517 | gap 1, overlap 156251 TAACAGCGAATATAA GTACTGCTAATACTGA-TAGC TCAATT GCTAGTCAGTATGACCAGTAC CAAAAAGAAGTTTCC secG 156006 - 156359 + | preprotein translocase, subunit G, membrane protein TERM 81 156486 - 156513 + T 76 -3.6 -5.40625 | AAATATGTATTTTTA CTGATATTATTA TAAA TAATAATGTAAG TTTTTTATCTAATAT hemN 159178 - 158036 - | coproporphyrinogen III oxidase, anaerobic FTM_0150 159560 - 159183 - | GtrA-like protein TERM 82 159449 - 159436 - G 74 -3.1 -5.29385 | AATGCAATTAAAAAA GCAAA AAAG TTCGC GACTAAAGGTCTAAA FTM_0151 159630 - 160508 + | iron-dependent peroxidase TERM 83 161333 - 161345 + G 71 -6.3 -4.23723 | GTAATGCTTGGTCAA CCATA CTA TATGG TTTTACCTGATGTTG TERM 84 161799 - 161786 - g 70 -2.4 -5.23316 | opp_overlap 161786, overlap 161778 CATGATATGAAAAAA GCTT TTGCAG AAGC TTTGGTACATGAGCA TERM 85 162012 - 161996 - g 89 -9.5 -4.15328 | opp_overlap 161996 AAGGCAAATGAGAAA GGCTTAA AAG TTAAGCC TTTTGTTAAAACATC TERM 86 161996 - 162012 + G 93 -9.5 -4.63932 | opp_overlap 161996 AAGGCAAATGAGAAA GGCTTAA AAG TTAAGCC TTTTGTTAAAACATC acnA 160613 - 163426 + | aconitate hydratase 1 FTM_0155 166878 - 166432 - | hypothetical protein TERM 87 169376 - 169399 + H 71 -3.4 -5.33331 | gap 1 TCAAGTTTAGCGTAG TAACATTA-AT AAA ATGTAATGTTA TTTTTATTATCTTTA TERM 88 169988 - 169978 - g 83 -6.8 -5.00616 | opp_overlap 169985 GTGTGCTTGAAAAAA TGGC GCT GCCA GCTAAGTTTGGCTTT FTM_0158 169467 - 170348 + | NAD dependent epimerase/dehydratase family FTM_0159 171772 - 170345 - | two-component regulator, sensor histidine kinase FTM_0162 174285 - 174806 + | hypothetical protein TERM 89 175766 - 175755 - f 72 -4.4 -5.09245 | TTAAAATCACAAAAA GGTA TACA TACC AATGATGAAGCCAAA TERM 90 176170 - 176158 - f 75 -4.9 -5.17353 | AGATTTACTAAAAAA TGTAT ATA ATACA AAAGTTATCGCTGAT TERM 91 176326 - 176354 + F 72 -8.4 -3.36054 | opp_overlap 176324, overlap 176324 TTTGATAGAGAATTT CTTTTCTAAAAT TAAGC ATTTTAGAAGAG TATTCTCTAGATTTG TERM 92 176489 - 176457 - f 87 -10.8 -3.48276 | opp_overlap 176466, overlap 176458 176466 TTTTTGTGCACAGAA CCTATAAAACACCA GTATT TGGTGTTTTATAGC GAAATGAAAACAATA TERM 93 176488 - 176458 - f 100 -14.3 -2.68823 | opp_overlap 176466, overlap 176457 176466 TTTTGTGCACAGAAC CTATAAAACACCA GTATT TGGTGTTTTATAG CGAAATGAAAACAAT TERM 94 176466 - 176480 + F 74 -6.4 -4.3739 | opp_overlap 176466 176458 176457 ACAGAACCTATAAAA CACCAG TAT TTGGTG TTTTATAGCGAAATG TERM 95 176480 - 176466 - f 71 -5.7 -4.49939 | opp_overlap 176466, overlap 176458 176457 ACAGAACCTATAAAA CACCA GTATT TGGTG TTTTATAGCGAAATG FTM_0164 177103 - 178116 + | peptidase, U61 family TERM 96 178795 - 178808 + T 82 -6.7 -4.86029 | TTATTTCAACCTCTT GTCGT ATAG ACGAC TTTTGTATTATTTAT TERM 97 178885 - 178869 - T 87 -3.7 -5.83211 | opp_overlap 178869 178870 178877, overlap 178870 CACCAAAAGAAAAAA GTTGGTT TTA AACCAAG TTTATCTTTAAGTAA TERM 98 178884 - 178870 - T 75 -7.2 -4.07486 | opp_overlap 178870 178869 178877, overlap 178869 ACCAAAAGAAAAAAG TTGGTT TTA AACCAA GTTTATCTTTAAGTA FTM_0165 180142 - 179561 - | transposase, IS4 family protein TERM 99 180168 - 180154 - R 79 -5.8 -5.02074 | CCATTTCTTAAAAAA TACAAA ATC TTTGTA TGACTATTATTCTAA FTM_0166 181664 - 180384 - | major facilitator superfamily TERM 100 181498 - 181479 - G 75 -7.2 -4.11404 | TGTATATGATACAAA GTATGCTG ATGA CAACATAC CTAGTTCTGTGTGAC FTM_0167 184897 - 181784 - | transporter, AcrB/AcrD/AcrF family TERM 101 184313 - 184326 + g 70 -3.8 -4.90778 | opp_overlap 184313 TGGTGTTATACCATA CTCG GCCATA CGAG TTTTATTTGGGTAAA FTM_0168 186270 - 184897 - | membrane fusion protein dsbB 186774 - 186283 - | disulfide bond formation protein TERM 102 186811 - 186798 - R 76 -3.9 -5.36965 | opp_overlap 186798 TAACACTATAAAAAA CAATT TTGT AATTG TATCATAGTTTTAGC cca 187896 - 186814 - | CCA-adding enzyme TERM 103 186958 - 186969 + g 74 -3 -5.25803 | AGTTATAGTATCGCA TATC TTTA GATA TTTTTTATAGAGATT TERM 104 189038 - 189054 + G 72 -8.1 -3.44146 | opp_overlap 189038 GGTAGCAGCAACTGA GGATATA TTT TATATCC TTGATTATCCAGCAG msbA 188001 - 189830 + | lipid A export permease/ATP-binding protein MsbA lpxK 189836 - 190804 + | tetraacyldisaccharide 4'-kinase TERM 105 192979 - 192969 - g 82 -5.4 -5.30339 | opp_overlap 192969 192967, overlap 192963 ATCAAAAGATAAAAA CCTT CTC AAGG TGTTTAATCAAAACT TERM 106 193441 - 193459 + G 77 -6 -4.66833 | ATTAAGATGGTGATG CAGGTTCA TGA TGAGCTTG TTTTTGAAGTTAAAA polA 190900 - 193593 + | DNA polymerase I FTM_0174 193613 - 194389 + | type III pantothenate kinase 1 deoB 194394 - 195638 + | phosphopentomutase deoC 195601 - 196362 + | deoxyribose-phosphate aldolase nupC1 196352 - 197551 + | nucleoside permease NupC nupC 197570 - 198772 + | nucleoside permease NupC tmk 198785 - 199414 + | thymidylate kinase prfC 199476 - 201053 + | peptide chain release factor 3 fimV 201128 - 202447 + | type IV pili, pilus assembly protein ftsY 202480 - 203475 + | signal recognition particle-docking protein FtsY TERM 107 204027 - 204016 - g 77 -3 -5.48514 | ATCAATAAACAAAAA GATA AAGC TATC CGTAGTAATAAACTA uvrD 203566 - 205788 + | DNA helicase II TERM 108 207040 - 207018 - g 70 -7 -3.74488 | opp_overlap 207018, overlap 207020 207023 GAATAAAACAAGCAA GACAACTTCT CAA AGAAGCTGGC TATTCAAAAAAACAT TERM 109 207038 - 207020 - g 72 -8.2 -3.42319 | opp_overlap 207018, overlap 207018 207023 ATAAAACAAGCAAGA CAACTTCT CAA AGAAGCTG GCTATTCAAAAAAAC FTM_0184 205907 - 207475 + | ABC-type oligopeptide transport system, periplasmic component oppD 209380 - 210348 + | peptide/opine/nickel uptake transporter (PepT) family protein FTM_0189 212528 - 211326 - | major facilitator superfamily TERM 110 211681 - 211667 - G 72 -5 -4.77079 | opp_overlap 211667 TAGATACTAATAAAA TCCCAA CTA TTGAGA TTGTTATAATTTTTT TERM 111 212145 - 212157 + g 74 -6.3 -4.43189 | opp_overlap 212143 212145 GATAATCAGGAAATA CTTTG ACT CAAAG TTTTCTAGCGTTAGT FTM_0190 212662 - 213243 + | hypothetical protein TERM 112 213338 - 213362 + F 70 -5.9 -4.35646 | opp_overlap 213341 AGATCTATAGCTAAT TAATTTGTTAG TAT CTAAAAAATTA TTTGTATTTACATAT FTM_0191 213342 - 214655 + | sugar transporter, MFS superfamily TERM 113 215000 - 214989 - g 74 -5.8 -4.55295 | opp_overlap 214989 TTTGGGATAAAGAAA CAGG TGAT CCTG TCTATAATGCTATAG glpK 214712 - 216220 + | glycerol kinase TERM 114 217223 - 217191 - f 86 -7.2 -5.09762 | CTCTAATAAATAAAA TCAACTCCTTTCAA GATTA TTAAAATGAGTTGA CGATACAAGAACAGT TERM 115 217493 - 217503 + G 79 -5.4 -5.1101 | opp_overlap 217493 AAGGAAGGCTTAGAA GAGA GAT TCTC TTTTTTACATAATGC TERM 116 217784 - 217770 - g 75 -7.2 -4.25104 | TTTCTTTGATGAAAA CTTTTG AAG CAAAAG GCGGTGTTGCTCTTA glpD 217283 - 218815 + | glycerol-3-phosphate dehydrogenase glpF 218825 - 219589 + | glycerol uptake facilitator protein TERM 117 219927 - 219938 + G 76 -4.4 -5.02715 | CAGCTATCTTGATTG CAAC TTTT GTTG TTTTTGCTTTAATCT FTM_0195 219593 - 220306 + | hypothetical membrane protein TERM 118 220510 - 220524 + G 79 -10 -3.30771 | TGGGGGTGCCGATAT CTCCTG TGA CAGGAG TTCTAACAGGTGTGG FTM_0196 220284 - 220781 + | small conductance mechanosensitive ion channel (MscS) family protein TERM 119 221606 - 221579 - f 85 -7.2 -4.86731 | gap 1, opp_overlap 221585 221591 CTTGGCGAAATAAAA CTG-TAATGCAAT CAA ATCGCATTATCAG GGATTTGGTGTTTGG TERM 120 222581 - 222565 - f 82 -10.9 -2.62616 | opp_overlap 222556 TCAGGTGGTAGAGCA CTCCCTT GGT AAGGGAG AGGTCACCAGTTCAA tufA 222659 - 223843 + | translation elongation factor Tu TERM 121 223905 - 223889 - f 70 -8.7 -2.63631 | overlap 223902 TCAATTGGTAGAGCA GCGGTCT CCA AAACCGC AAGTTGGGGGTTCGA TERM 122 223949 - 223977 + F 100 -14.7 -5.80003 | opp_overlap 223949 TGCCACATATATTAA GGCAGTGTTGTAA TTT TTGCAGCACTGCC TTTTTTATTTCTTGA TERM 123 223977 - 223949 - f 83 -10.3 -3.35197 | opp_overlap 223949 TGCCACATATATTAA GGCAGTGTTGTAA TTT TTGCAGCACTGCC TTTTTTATTTCTTGA secE 224036 - 224506 + | preprotein translocase, subunit E, membrane protein nusG 224522 - 225055 + | transcription termination/antitermination factor NusG TERM 124 225068 - 225050 - f 74 -6.1 -4.44355 | opp_overlap 225050 CAAGTTGAAAAAGAA TCTTAGT GTTCA ACTAAGA TATTGGGGAGCTTAT rplK 225125 - 225559 + | 50S ribosomal protein L11 TERM 125 225616 - 225593 - g 76 -6.8 -4.63748 | AAAGAATGAAAGAAA TCTCAGCA AAAATTAA TGCTGAGA AAAAATATCCAGTAT TERM 126 226166 - 226156 - g 71 -3.2 -5.05782 | ACTGATCTGAAAAAA GCTA AGC CAGC AGTATCTAAGGGTAT rplA 225562 - 226257 + | 50S ribosomal protein L1 TERM 127 226464 - 226454 - g 82 -5.4 -5.35459 | ATAGAGGATAAAAAA GCAA TTG TTGC TGAAGTTGCTGAACA rplJ 226427 - 226945 + | 50S ribosomal protein L10 TERM 128 227242 - 227222 - g 70 -4 -4.86731 | CTGGTTCAAATAAAA TTGCTGCT ATTAA AGCAGTAA GAGGCGCAACTGGTT TERM 129 227335 - 227315 - g 77 -9.8 -2.98866 | opp_overlap 227303, overlap 227311 227314 TCACAGTTAAAGAAG CTGCTTCT AAAGA AGAAGCAG AAGCTCTTAAAAAGC rplL 227008 - 227388 + | ribosomal protein L7/L12 TERM 130 227422 - 227450 + F 83 -8.9 -4.06384 | opp_overlap 227421, overlap 227421 227445 TTTTTAGAAATTTAT GACTAGTGGTCAA TTT TTGGTCCCTAGTC TTTCTAGTATTGAAA TERM 131 227483 - 227502 + F 95 -8 -5.58522 | TACATAGATATTGGT GCAAATAT AATC ATATTTGC TTTTTATTTTGTGTA TERM 132 228196 - 228175 - g 81 -8.1 -4.15006 | gap 1 ACAGTTATTTTAAAA GCTCTTG-GT TAT ACTCAAGAGC AAATATTAGAGAATT TERM 133 228371 - 228352 - g 90 -3.6 -5.80727 | AAAAAGAATAAAAAA TTAACTTC AAGA GATGTTAA GAAAATTAAAGATGC TERM 134 230705 - 230686 - g 77 -3 -5.5074 | gap 1, overlap 230687 230690 GAAGCTAAGAAAAAA TCTATTACT CAG AGTAAT-GA GCTATCTCCAGGTGT rpoB 227542 - 231618 + | DNA-directed RNA polymerase, beta subunit rpoC 231680 - 235933 + | DNA-directed RNA polymerase, beta' subunit FTM_0211 236036 - 236272 + | hypothetical membrane protein gcp 236272 - 237282 + | O-sialoglycoprotein endopeptidase FTM_0213 237396 - 238562 + | fatty acid desaturase metK 239934 - 238774 - | S-adenosylmethionine synthetase TERM 135 239809 - 239821 + g 74 -3.4 -5.25799 | TACTAAAGTTTCACA TGCT ACACG AGCA TTTTTATCTTGTTTT TERM 136 239943 - 239962 + H 73 -9.4 -2.59323 | overlap 239942 239954 TTGACATTTTATGCT CCTTTTAG TTAG CTAAAAGG CTTCTAGAAAATTTT rpsP 240228 - 240476 + | 30S ribosomal protein S16 rimM 240519 - 241028 + | 16S rRNA processing protein RimM trmD 241431 - 242189 + | tRNA (guanine-N1)-methyltransferase rplS 242189 - 242536 + | 50S ribosomal protein L19 xerD 242702 - 243580 + | tyrosine recombinase XerD FTM_0221 244554 - 245138 + | acid phosphatase, HAD superfamily protein FTM_0224 247820 - 248287 + | (Di)nucleoside polyphosphate hydrolase TERM 137 248282 - 248292 + T 70 -5.4 -4.61162 | opp_overlap 248282 TTTAAGGAGTATATA GCTT AAC AAGC TTTATTATTTGCTCT nudH 248923 - 248297 - | dGTP pyrophosphohydrolase ampD 248997 - 249521 + | N-acetylmuramoyl-L-alanine amidase, protein AmpD parE 251452 - 249569 - | DNA topoisomerase IV, B subunit FTM_0228 252724 - 251543 - | drug:H+ antiporter-1 (DHA1) family protein TERM 138 252160 - 252144 - G 74 -6.7 -4.42062 | opp_overlap 252146 TAGTTCTTAAAGAAA GATTTAA AAG TTAAATC TTCAAAGTTTTTTTC TERM 139 252681 - 252665 - G 79 -8.7 -3.79519 | AATGGTATCACCAAA TGGTCCC AAA GAGACCA TGAGAATTAAGATAA FTM_0229 254094 - 252724 - | outer membrane assembly lipoprotein YfgL FTM_0230 254735 - 254097 - | hypothetical protein TERM 140 254607 - 254617 + g 86 -5.4 -5.71983 | TTGATATATTGTTGA TGCT TCG AGCA TTTTTTTATCATTGC TERM 141 255789 - 255807 + G 72 -8.2 -3.39784 | overlap 255787 AAAATGTTTATTATT GCGTTGAT GAT ATTAACGC TGTTATTGAAGATAA hemA 254915 - 256159 + | glutamyl-tRNA reductase prfA 256160 - 257245 + | peptide chain release factor 1 hemK 257238 - 258092 + | modification methylase, HemK family groEL 261145 - 259511 - | chaperonin GroEL (HSP60 family) groES 261470 - 261183 - | co-chaperonin GroES (HSP10) TERM 142 261596 - 261610 + H 73 -3.6 -5.24129 | CAAAAAAAAAATTTT CAAGAA ATT TTTTTG TTTTTTATCAAACAA FTM_0237 261720 - 262154 + | hypothetical protein TERM 143 262508 - 262491 - f 75 -7.1 -4.15066 | TACTTATAAACGAAA TATAGCA GTAA TGCTATA TACAAAAACAAATCA TERM 144 262952 - 262939 - g 70 -3.9 -4.86939 | GAAGAAATTGAAAAA CTAAT GAAA ATTAG TCCTAAGTTAGCTGA FTM_0239 262795 - 263559 + | hypothetical protein TERM 145 265831 - 265847 + F 73 -9.5 -2.62396 | overlap 265833 TTGAACCAGTGACCC CAGCATT ATG AATGCTG TGCTCTAACCAACTG TERM 146 266147 - 266134 - g 78 -2.4 -5.66338 | overlap 266122 AAATAGAAGAAAAAA CTTC TAGAAT GAAG CAAGCTAGGGATAAG TERM 147 266745 - 266718 - g 70 -2 -5.32882 | TACGAGTATAAAAAA CAGCAACAAC AAGAGAAA GTTGATACTG AGGAATAACTAATAA proQ 266052 - 266753 + | activator of osmoprotectant transporter ProP FTM_0244 266776 - 267321 + | hypothetical protein trkH 268790 - 267336 - | K+ transporter (Trk) family protein FTM_0246 268902 - 269105 + | hypothetical protein lolA 270104 - 269487 - | lipoprotein releasing system, subunit A, outer membrane lipoproteins carrier ftsK 272600 - 270105 - | cell division protein FtsK TERM 148 271970 - 271980 + g 76 -4 -5.24416 | TTTCAAAGCCATTTA TATC TGG GATA TTTTTATTATCATTA FTM_0249 272722 - 273390 + | phosphatidic acid phosphatase, PAP2 superfamily TERM 149 273585 - 273597 + F 81 -3.5 -5.65513 | opp_overlap 273585, overlap 273569 273594 AAAGGGTTAAATCTA TTAAA CTC TTTAA TTTTTTTAATTAATA TERM 150 274198 - 274208 + G 74 -6.8 -4.33105 | overlap 274191 CAGAACTGGCATATC GGAG ATG CTCC TTTTCATAATGGTTG lysP 273637 - 275091 + | lysine:H+ symporter FTM_0251 275100 - 275738 + | hypothetical protein TERM 151 275864 - 275848 - g 75 -8 -3.81279 | opp_overlap 275846, overlap 275846 AGAGGTGATAAAATA GCAGCT GATCA AGCTGC CGTTGATGCGATGAG glpX 275758 - 276744 + | fructose-1,6-bisphosphatase, class II TERM 152 279497 - 279487 - g 71 -5.4 -4.48072 | ATATGGAGTAGAAAA GCTT TAG AAGC AACATCCAAGTGGGA FTM_0254 278587 - 280266 + | glycosyl transferase, group 2 TERM 153 280380 - 280394 + G 75 -7.1 -4.09685 | opp_overlap 280380 280372 TAGTTAAGCTTAGAA GCTCG CAGGT CGAGC TTTTACGCAATAAAA TERM 154 280886 - 280874 - g 77 -4.8 -5.05782 | AGCTATCTTAAAAAA CCTC TAACG GAGG AACATCGAGATATTT FTM_0255 280277 - 281584 + | transporter-associated protein, HlyC/CorC family FTM_0256 281655 - 282002 + | hypothetical protein FTM_0259 284318 - 284938 + | pilus assembly protein TERM 155 285661 - 285672 + T 71 -5.8 -4.37711 | opp_overlap 285646, overlap 285648 GCCGGCTATTAGATG GCAG TGTA CTGC TTTTGGATTTGATAG TERM 156 287748 - 287738 - T 70 -4 -4.87786 | TTAATTTTAGAAAAA TTTC TTA GAAA TGGTAATTATGATAT TERM 157 288767 - 288784 + T 71 -7.1 -3.76383 | opp_overlap 288767 TAATCTTTTCTTAAA TCTCAAT TTCC ATTGAGA TTATCTTCCATTTTT FTM_0263 289253 - 288762 - | acetyltransferase FTM_0264 290457 - 289279 - | drug:H+ antiporter-1 FTM_0265 291457 - 290513 - | modification methylase, HemK family cysS 292840 - 291461 - | cysteinyl-tRNA synthetase TERM 158 292300 - 292318 + g 70 -4.6 -4.72272 | opp_overlap 292300 CCATCTTCCAAAGTA CAAAATCC ATT GGATTTTC TTTTTCCTCAACCAC FTM_0269 294570 - 294289 - | hypothetical membrane protein TERM 159 294445 - 294429 - G 100 -10.9 -5.30686 | AATAGCCAGAAAAAA TAGCGGT TAA ACCGCTA AAGCATACACCAATA FTM_0270 296085 - 294583 - | amino acid-polyamine-organocation family protein FTM_0271 297193 - 296450 - | hypothetical protein TERM 160 296900 - 296928 + g 73 -6.9 -4.01078 | AATATCTTCAATTAG TTTTTGATAGAGA ATT TCTTGATCAAAAA TTTCTGCTAACTTTT ubiG 297890 - 297195 - | 3-demethylubiquinone 3-methyltransferase/ 2-octaprenyl-6-hydroxyphenol methylase FTM_0273 298032 - 299132 + | VacJ family protein TERM 161 299679 - 299668 - f 74 -3 -5.44119 | opp_overlap 299654 299668 TTCAGTTTAAAAAAA TGAT TTAT ATCA GATTTTATGAACAAG TERM 162 302897 - 302877 - f 73 -9 -3.11316 | opp_overlap 302873, overlap 302853 TTAGTATTTAAGAGA TCCCCGTG TTAAG CACGAGGA TGACTACTGTTTTTA FTM_0277 304236 - 304961 + | hypothetical protein TERM 163 308654 - 308673 + F 70 -5.8 -4.21827 | gap 1, opp_overlap 308654 308652 GATGGACTAAGAACA GGTCTGAGA TCT TCT-AGACC TTTTGAAGTGTTTGA FTM_0281 311395 - 311865 + | hypothetical protein FTM_0282 312002 - 312826 + | short-chain dehydrogenase/reductase FTM_0283 314197 - 312848 - | amino acid-polyamine-organocation (APC) superfamily protein FTM_0284 315328 - 314456 - | hypothetical protein FTM_0285 316723 - 316274 - | hypothetical protein FTM_0286 317127 - 316732 - | hypothetical protein TERM 164 317445 - 317460 + G 82 -3.3 -5.58454 | CTTATGTTGAGGGCG GTATC GCCACA GATAC TTTTTTTAATATGAA FTM_0287 317210 - 317941 + | oxidoreductase rpmE 318063 - 318278 + | 50S ribosomal protein L31 TERM 165 318310 - 318324 + T 95 -7.1 -5.82281 | opp_overlap 318310 TCGCAGCAAACTAAA CCAGC CTTGT GCTGG TTTTTTTGTATCTTT TERM 166 318324 - 318310 - T 75 -7.1 -4.10552 | opp_overlap 318310 TCGCAGCAAACTAAA CCAGC CTTGT GCTGG TTTTTTTGTATCTTT gshA 319994 - 318489 - | glutamate-cysteine ligase TERM 167 318587 - 318599 + g 71 -5.5 -4.56914 | CTGCAGCAACAGATT GGCCA GCT TGGTC TTTTAATTTAGCTAC mviN 321588 - 320047 - | multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) transporter TERM 168 321478 - 321466 - G 70 -4.1 -4.79667 | overlap 321468 321476 AAAAGCCACTAAAAA TGCCT GCA AAGCA GCTCCGCTGCCAAAA TERM 169 321488 - 321476 - G 80 -9.1 -3.5771 | overlap 321466 321468 AAAAATGCCTGCAAA GCAGC TCC GCTGC CAAAAAAGCTTGCTA FTM_0291 322672 - 321611 - | hypothetical protein FTM_0292 323165 - 322755 - | hypothetical protein folC 324324 - 323143 - | folylpoly-gamma-glutamate synthetase/ dihydrofolate synthetase accD 325241 - 324339 - | acetyl-CoA carboxylase, carboxyl transferase, beta subunit TERM 170 324642 - 324667 + g 72 -9.1 -2.71146 | opp_overlap 324647, overlap 324647 324664 GGTTGTTGGGTCTGT CAAAACTACCA AGTA TGGTAGTTTAG CTTCTGCTAATTTTT TERM 171 324662 - 324647 - G 76 -7.6 -4.07568 | opp_overlap 324647 324642 TTGGGTCTGTCAAAA CTACCA AGTA TGGTAG TTTAGCTTCTGCTAA TERM 172 324647 - 324662 + g 73 -7.6 -3.82083 | opp_overlap 324647, overlap 324642 TTGGGTCTGTCAAAA CTACCA AGTA TGGTAG TTTAGCTTCTGCTAA TERM 173 324664 - 324677 + g 77 -5.3 -4.84359 | overlap 324642 ACCAAGTATGGTAGT TTAGC TTCT GCTAA TTTTTGTAAAGCTGC ndk 325705 - 325283 - | nucleoside diphosphate kinase pyrG 327418 - 325778 - | CTP synthase (UTP-ammonia lyase) TERM 174 327455 - 327443 - R 76 -2.7 -5.63645 | TGAAAATATAAAAAA TCATG GAA CATAA TAATAACATTTTTAC TERM 175 327480 - 327459 - R 74 -7.5 -3.97511 | opp_overlap 327465, overlap 327462 CATGGAACATAATAA TAACATTTT TACA AAAATGTTA CCATTTGAAAATACA TERM 176 328044 - 328060 + r 73 -3.7 -5.22794 | TCTAAAGATAGTGGA GCAGTAG CTA TTATTGC TTTTTTGCTAATTAT TERM 177 328927 - 328937 + r 72 -4 -5.08601 | overlap 328922 ATCAATATGTTTCCG CATT AGG AATG TTTTTCTTCCAGTCA TERM 178 329289 - 329273 - R 100 -12.3 -2.60244 | overlap 329244 329242 329269 CTTGCAAGCAAGGTA CTCCTCC ATA GGAGGAG AATAATCCTATACCC TERM 179 329409 - 329384 - R 70 -8.3 -3.19789 | opp_overlap 329388, overlap 329383 329380 329387 329388 AAGCTATAAAATAAC GAATTTCCCAC GAAG GTGGGAATCTC TCAAATACTTGTCAG TERM 180 329405 - 329388 - R 76 -9.9 -2.82162 | opp_overlap 329388, overlap 329387 329384 329383 329380 TATAAAATAACGAAT TTCCCAC GAAG GTGGGAA TCTCTCAAATACTTG TERM 181 329388 - 329405 + r 77 -9.9 -2.90688 | opp_overlap 329388 329387 329384 329383 329380 TATAAAATAACGAAT TTCCCAC GAAG GTGGGAA TCTCTCAAATACTTG FTM_0298 330431 - 329475 - | hypothetical membrane protein TERM 182 331734 - 331706 - H 72 -8.4 -3.36054 | opp_overlap 331704, overlap 331704 CAAATCTAGAGAATA CTCTTCTAAAAT GCTTA ATTTTAGAAAAG AAATTCTCTATCAAA TERM 183 331890 - 331902 + H 75 -4.9 -5.17353 | ATCAGCGATAACTTT TGTAT TAT ATACA TTTTTTAGTAAATCT TERM 184 332294 - 332305 + H 72 -4.4 -5.09245 | TTTGGCTTCATCATT GGTA TGTA TACC TTTTTGTGATTTTAA TERM 185 332540 - 332516 - H 77 -6 -4.99638 | ATATTTATATAAAAA TTTATTTAAA ATGTA TTTAAATAAA GTACACTACATATGG FTM_0299 332556 - 333521 + | glycosyltransferase sugar-binding region containing DXD motif family htpG 334630 - 336516 + | chaperone Hsp90, heat shock protein HtpG fumA 339493 - 337979 - | fumarate hydratase, class I FTM_0302 340242 - 340045 - | hypothetical protein recG 342285 - 340246 - | ATP-dependent DNA helicase RecG FTM_0304 342415 - 342759 + | conserved TERM 186 342993 - 342973 - g 86 -4.8 -5.70761 | AAAACAAAACAAAAA GAAGATTC CTACC AAATCTTC ATGCACACAGATTTT TERM 187 343049 - 343037 - g 71 -6.3 -4.21994 | overlap 343033 AAATAGATACATAAA GCTAA GAG TTAGC TCTAAAGGTATGAGA rpmB 342894 - 343130 + | 50S ribosomal protein L28 rpmG 343157 - 343312 + | 50S ribosomal protein L33 minC 343347 - 344033 + | septum formation inhibitor minD 344073 - 344897 + | septum formation inhibitor-activating ATPase minE 344900 - 345172 + | cell division topological specificity factor protein FTM_0310 345186 - 345989 + | ABC transporter, ATP-binding protein FTM_0311 345993 - 346757 + | ABC-type transport system permease protein FTM_0312 346757 - 347290 + | ABC transporter, periplasmic protein TERM 188 347623 - 347613 - g 74 -3.2 -5.2696 | overlap 347617 CCAAAATGGAAAAAA GCTA CTC CAGC GGAACAAAAACAATT FTM_0313 347364 - 348026 + | hypothetical protein FTM_0314 348026 - 348319 + | hypothetical protein FTM_0315 348336 - 348572 + | BolA family protein TERM 189 348732 - 348747 + F 74 -5.4 -4.90778 | TAATTAGAACTCTGA GCCTAT CGGA ATGGGC TTTTATTTAGCTAAG TERM 190 351706 - 351693 - f 74 -5.3 -4.88228 | ATCCAAGACTAAAAA TAGCT CGTG AGCTA CTTAAAGAAGATGGT TERM 191 352742 - 352762 + F 76 -9.8 -2.57795 | opp_overlap 352732 352730, overlap 352739 ATACAGCAATCGTCA TTCTACGG CTTGA CCGTAGAA TCCATTGCTAATAAA TERM 192 353102 - 353082 - f 76 -9.8 -2.59748 | opp_overlap 353078, overlap 353078 TAGGTGGAGAATGGA TTCTACGG TCAAG CCGTAGAA TGACAATTTTGTTGG FTM_0319 353138 - 353638 + | hypothetical protein TERM 193 353808 - 353796 - f 81 -6.3 -5.07053 | overlap 353805 AAGTAGTGTAAAAAA TGCAA AAG TTGCA TAATGCAGGTAGCTA FTM_0320 353839 - 356565 + | type III restriction enzyme TERM 194 356573 - 356563 - g 74 -5.4 -4.78107 | CAGGAGTACCAAAAA TGAC TTG GTCA GATATCTTAGCAGAA TERM 195 356809 - 356795 - g 75 -10 -2.61831 | opp_overlap 356794, overlap 356794 356793 CTCAGTGCAAAAAGG GGTGGA CAT TCCACC ATCATTGCAAAATAT TERM 196 357033 - 357014 - g 84 -8 -4.46581 | opp_overlap 357014 357018, overlap 357018 CAAAATTTCAGAAAA TAAACACA ATGT TGTGTTTA TGCTTTGGGGTTCGC TERM 197 357029 - 357018 - g 70 -4.4 -4.77775 | opp_overlap 357018 357014, overlap 357014 ATTTCAGAAAATAAA CACA ATGT TGTG TTTATGCTTTGGGGT ung 356562 - 357224 + | uracil-DNA glycosylase TERM 198 357601 - 357615 + F 83 -10 -3.66117 | overlap 357597 GAGGTTCTGGAGTAG GTCCAG GCT CTGGAC TTGGTTTGCTTTCAT gyrA 359184 - 361790 + | DNA gyrase, A subunit TERM 199 362774 - 362746 - g 71 -5.5 -4.50943 | TAATAATTTACAAAA TAAAAATTATGCT GCT AACATAGTTTTTA ATGCTGCTAATGAGG dxr 361796 - 362953 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 200 363925 - 363908 - g 75 -4.9 -4.85599 | opp_overlap 363915 363916, overlap 363910 TTGAGGGGATAAAAA CTCTACT AGGT AGTAAAG GATATGCCTTTGCTA TERM 201 364302 - 364324 + G 72 -4.8 -4.72272 | TGGATTTATGATAGG CGGTAGGC TGAATAT GCCTAACG TTTTTGGTACGGGAA FTM_0325 362959 - 365337 + | conserved outer membrane protein of unknown function ompH 365473 - 365976 + | outer membrane protein OmpH TERM 202 366589 - 366575 - g 73 -4.3 -4.84359 | GTAGTTGGACAAAAA TTCCT CAGCT AGGAA GAGTAATTATCGAAG lpxD1 365995 - 367008 + | UDP-3-O-(3-hydroxy-fatty acid)-glucosamine N-acyltransferase fabZ 367023 - 367514 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ lpxA 367517 - 368296 + | UDP-N-acetylglucosamine acyltransferase lpxB 368296 - 369438 + | lipid A disaccharide synthase TERM 203 369689 - 369705 + G 74 -3 -5.243 | gap 1, opp_overlap 369689 GTTCAACAAGAATAT CCA-CTC TTAA GAGATGG TTTTTTGCTACTTTA FTM_0331 369497 - 370084 + | hypothetical membrane protein FTM_0332 370175 - 370549 + | hypothetical protein TERM 204 372319 - 372331 + T 86 -6.3 -5.46706 | TTTAAATAGAACTGT TAGTC AAG GACTA TTTTTGTTTTGCGCT FTM_0335 373155 - 372346 - | polyphosphate kinase 2 pcs 373989 - 373225 - | (CDP-alcohol) phosphatidyltransferase ispA 374918 - 374037 - | geranyl diphosphate synthase/farnesyl diphosphate synthase kdtA 376210 - 374915 - | 3-deoxy-D-manno-octulosonic-acid transferase TERM 205 376099 - 376117 + g 71 -3.2 -5.07567 | TTCTGTAGTTAATGT TTTTAAAG CTT CTTTTAAA TTTTTTCAGATATAA FTM_0339 376893 - 376315 - | RgdB/HAM1 family protein TERM 206 377246 - 377236 - g 76 -4 -5.26316 | TGAGCTTATAAAAAA TATC AGA GATA CAGTTACATCTACTC proC 377000 - 377797 + | pyrroline-5-carboxylate reductase FTM_0342 379560 - 380246 + | two-component response regulator TERM 207 380551 - 380573 + G 74 -3.4 -5.35224 | opp_overlap 380552 380554, overlap 380552 CCAACTGCATCAATG ACACCAAC ACTTCCA GTTGGTGA TTTTATTTTTGTCAA TERM 208 380552 - 380572 + G 70 -6.9 -3.79508 | opp_overlap 380552 380554, overlap 380551 CAACTGCATCAATGA CACCAAC ACTTCCA GTTGGTG ATTTTATTTTTGTCA lepB 380251 - 381114 + | signal peptidase I rnc 381121 - 381813 + | ribonuclease III truB 381800 - 382708 + | tRNA pseudouridine synthase B TERM 209 382850 - 382866 + G 71 -6.7 -4.11371 | opp_overlap 382852 AGCAAATGCTTTAGA GATTTTT AAA AAAAATC TTTTCGAAGGTCTTG TERM 210 383646 - 383658 + G 72 -9.1 -2.71537 | overlap 383645 TCAGCTTTGGATTTA GACGC TAA GCGTC GTTCTACTTCAGTGT rnr 382701 - 384998 + | ribonuclease R FTM_0348 386198 - 385455 - | oxidoreductase TERM 211 385566 - 385595 + g 82 -10.1 -3.70546 | opp_overlap 385558, overlap 385569 AAATTTACTTGTTTG CAAGCCTTTGATA ATAC TATCAGCGGCTTG TTCTGGTTTTAATAG FTM_0350 387254 - 386781 - | hypothetical protein TERM 212 390645 - 390656 + r 72 -4.4 -5.06451 | TATTATTATTTATAT CTGT GATA ACAG TTTTTTCAGATCGTA FTM_0355 393158 - 392469 - | two component response regulator TERM 213 392999 - 393018 + g 72 -8 -3.42147 | opp_overlap 392999 393002, overlap 393002 GCATCATCCAATCTA TAACTATG ACAT CATAGTTA TTGGTATTGATTAGA FTM_0356 393301 - 393840 + | hypothetical membrane protein TERM 214 393890 - 393902 + F 70 -6.3 -4.07789 | opp_overlap 393889 AATCTCTTTATGAAC GGATT TAA AATCC TATTTTTATAAGTTA TERM 215 394074 - 394093 + G 83 -2.2 -5.80003 | overlap 394076 TACTAATTACATTGT TTTAACTT CAGT AAGTTGGA TTTTTTATTTATTGA FTM_0357 393958 - 394359 + | hypothetical membrane protein FTM_0358 394534 - 395142 + | lipoprotein, putative FTM_0359 395199 - 396629 + | hypothetical protein TERM 216 396866 - 396850 - g 72 -9.5 -2.74701 | overlap 396847 AGAGTCGCAATATTA CCTTTTG ATA CAAAAGG TGCCAAGATAGATGG FTM_0360 396640 - 397623 + | hypothetical protein FTM_0361 397629 - 399023 + | lipoprotein, putative FTM_0362 399163 - 400077 + | hypothetical protein TERM 217 402669 - 402645 - g 87 -6.5 -5.53991 | opp_overlap 402650 402651, overlap 402651 GACCTAGCAAAAAAA TCAAAACAAGG ACG CCTTGATTTAA TAAAAGATGCTAAGG TERM 218 402663 - 402651 - g 88 -7.7 -4.94243 | opp_overlap 402651 402650, overlap 402645 GCAAAAAAATCAAAA CAAGG ACG CCTTG ATTTAATAAAAGATG FTM_0364 401409 - 402824 + | nicotinamide phosphoribosyltransferase FTM_0366 404890 - 404402 - | thioesterase family protein TERM 219 404857 - 404847 - G 71 -5.4 -4.4959 | CTGAAGCAAGTAAAA TTCC ATG GGAA ATCAATTGGTTTATA fadA 406139 - 404952 - | acetyl-CoA acetyltransferase TERM 220 405520 - 405536 + g 74 -6.5 -4.35483 | TGATTAATGATCTCT CCAGTTG CTT CATCTGG TTTGTTGTGATCAAC FTM_0368 408848 - 406152 - | bifunctional protein: 3-hydroxacyl-CoA dehydrogenase/acyl-CoA-binding protein fadE 411161 - 408921 - | acyl-coenzyme A dehydrogenase TERM 221 411118 - 411128 + g 76 -4.6 -5.19916 | TCTGTTTGCGAAATT GCCG GCG TGGC TTTTTTGGCTATTTT fadD 412887 - 411199 - | long chain fatty acid-CoA ligase TERM 222 413313 - 413300 - g 70 -3.9 -4.87803 | TATTTGGAAAGAAAA CTTTA GTGA TAAAG AGTTTACAGAGGCTG FTM_0371 413031 - 413450 + | arsenate reductase icd 413499 - 415715 + | isocitrate dehydrogenase, NADP-dependent TERM 223 415855 - 415875 + G 77 -9.8 -3.06509 | overlap 415846 415850 TTAACTGCGGTTGCA GCTTGGTT ATTTA AACCAAGC TATAGTTATTTGCAG FTM_0373 415729 - 416616 + | hypothetical membrane protein TERM 224 418049 - 418036 - g 71 -6.7 -4.2717 | opp_overlap 418036 ATGATGGGATGAAAA TGGCA GTTA TGCCA TTAGATCCTAAGTTG TERM 225 419040 - 418997 - g 77 -9.8 -3.07787 | gap 1, opp_overlap 419009, overlap 418984 419009 419010 419011 AAGAGTAGTGCAATA CTCAAAGATAAATC-CTCGAG AGG CTCGAGAGATTTTTATTCGAG AAGCTTTAGTAAAGG TERM 226 419028 - 419009 - g 78 -7.2 -4.35646 | gap 1, opp_overlap 419009, overlap 418997 419010 419011 ATACTCAAAGATAAA TC-CTCGAG AGG CTCGAGAGA TTTTTATTCGAGAAG TERM 227 419009 - 419028 + G 88 -7.2 -5.06414 | gap 1, opp_overlap 419009 418997 419010 419011 ATACTCAAAGATAAA TC-CTCGAG AGG CTCGAGAGA TTTTTATTCGAGAAG TERM 228 419026 - 419010 - g 73 -8.7 -3.20303 | opp_overlap 419009, overlap 419009 418997 419011 TACTCAAAGATAAAT CCTCGAG AGG CTCGAGA GATTTTTATTCGAGA TERM 229 419025 - 419011 - g 75 -10 -2.51459 | opp_overlap 419009, overlap 419010 419009 418997 ACTCAAAGATAAATC CTCGAG AGG CTCGAG AGATTTTTATTCGAG hrpA 416640 - 420908 + | ATP-dependent helicase HrpA TERM 230 421465 - 421454 - f 72 -4.4 -5.09245 | TTAAAATCACAAAAA GGTA TACA TACC AATGATGAAGCCAAA TERM 231 421869 - 421857 - f 75 -4.9 -5.17353 | AGATTTACTAAAAAA TGTAT ATA ATACA AAAGTTATCGCTGAT TERM 232 422025 - 422053 + F 72 -8.4 -3.36054 | opp_overlap 422023, overlap 422023 TTTGATAGAGAATTT CTTTTCTAAAAT TAAGC ATTTTAGAAGAG TATTCTCTAGATTTG TERM 233 422653 - 422664 + G 77 -5.8 -4.74103 | AAGGTGATAGTAGGT CTCC AGCA GGAG TTTTTAGCTTAGGAA FTM_0375 422409 - 423092 + | hypothetical protein TERM 234 425938 - 425958 + T 79 -5.5 -5.16472 | CAGATGGTTTAAAGT TGTATCC TCCTTCT GGATACA TTTTTTCAGCTTTTT FTM_0379 426727 - 426155 - | methylated DNA protein cysteine methyltransferase TERM 235 426655 - 426680 + g 77 -4.9 -5.1356 | gap 1 GCGTCTGAATCTCTT GAGC-ATAAAAT ACG GTTTTATAGCTC TTTTTATTGATCGCA TERM 236 427280 - 427312 + G 71 -6.3 -4.15061 | overlap 427283 GGGATTTCTTCTGGG CAACATTGCTTGGGA TAA TTCCTGGTAGTGTTG TTTATGTATGGGTTG FTM_0380 426757 - 427476 + | snare associated golgi protein FTM_0381 427479 - 428897 + | dihydrolipoamide dehydrogenase TERM 237 429017 - 429027 + G 82 -3.2 -5.64274 | ATAGTTGGTTTGGTT GCTG CAA TAGC TTTTTTTATAAATCA FTM_0382 428894 - 429439 + | phosphatidyltransferase FTM_0385 430639 - 431565 + | subunit of DnaJ/DnaK/GrpE: chaperone with DnaK; heat shock protein FTM_0386 432439 - 431555 - | 10 TMS drug/metabolite exporter protein TERM 238 432411 - 432421 + g 77 -5.4 -4.9138 | opp_overlap 432411 GTAACTATAAAAAGT GCTA GAA TAGC TTTTCTTTGAATACT TERM 239 432765 - 432782 + H 70 -3.5 -5.10665 | overlap 432753 AATTATTTTTAAGTT TAAAAGT ATTA GCTTTTA TTTTATTTATTGCAT FTM_0388 433532 - 433888 + | hypothetical protein relA 434192 - 436201 + | GDP pyrophosphokinase/GTP pyrophosphokinase FTM_0390 436949 - 436317 - | hypothetical protein TERM 240 436346 - 436365 + g 80 -6.4 -4.8048 | overlap 436335 AGTTGCCAGTATTTT TGGCTTGT TGTA ACCAGCCA TTTTTAATATAAAAA TERM 241 437271 - 437291 + H 80 -9.8 -3.35798 | opp_overlap 437270 437271, overlap 437269 TATGCACAAATCAAC TCTCACCA TTAGC TGGTGAGA TAATTTTTACTTTAA TERM 242 437291 - 437271 - H 76 -9.8 -2.76711 | opp_overlap 437271 437269, overlap 437270 TATGCACAAATCAAC TCTCACCA TTAGC TGGTGAGA TAATTTTTACTTTAA FTM_0392 437695 - 438309 + | hypothetical membrane protein FTM_0393 439041 - 438316 - | hypothetical protein xerC 439919 - 439041 - | site-specific recombinase TERM 243 439590 - 439606 + g 80 -7.3 -4.46493 | CAATTCATCTGTGTT GACTACT TTG GGTAGTC TTTTGCTATCTTTAG FTM_0395 441101 - 439929 - | hydroxy/aromatic amino acid permease (HAAAP) family protein TERM 244 440882 - 440872 - G 82 -5.4 -5.28683 | ATTAATATCAAAAAA GCAA TAC TTGC AACAACTCCACCTGA TERM 245 441294 - 441310 + r 86 -3 -5.86061 | TTAACTGTATGTGAT CTAGTA TATCC TACTGG TTTTTTTTGGTCGAC TERM 246 441406 - 441417 + r 88 -3 -6.04324 | opp_overlap 441406, overlap 441411 TATATAAACATAGAA CTTT CGAA AAAG TTTTTTCTTTTTTAG TERM 247 441411 - 441424 + r 70 -3.9 -5.07107 | opp_overlap 441406, overlap 441406 AAACATAGAACTTTC GAAAA AGTT TTTTC TTTTTTAGCGATTTC TERM 248 441915 - 441927 + r 74 -7.7 -3.85698 | GCCAACGCTTGCACT GCCAT CCA ATGGC TTTATAAAACAAGGA secB2 443022 - 442579 - | preprotein translocase, subunit B mutS 445633 - 443099 - | DNA mismatch repair protein MutS accA 445800 - 446747 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 249 446807 - 446841 + G 74 -6.6 -4.29304 | opp_overlap 446815, overlap 446810 446815 AAGCAGGCTTTGGCA TAGTAGAATCAATGCT TGC AGCTTTGATTTTATTG TTTGTATTATCCTCA TERM 250 446810 - 446838 + G 81 -8.3 -4.25053 | opp_overlap 446815, overlap 446807 446815 CAGGCTTTGGCATAG TAGAATCAATGCT TGC AGCTTTGATTTTA TTGTTTGTATTATCC TERM 251 446815 - 446833 + G 83 -6 -5.06472 | opp_overlap 446815, overlap 446810 446807 TTTGGCATAGTAGAA TCAATGCT TGC AGCTTTGA TTTTATTGTTTGTAT FTM_0400 446767 - 447270 + | pilus assembly protein FTM_0401 447251 - 448264 + | pilus assembly protein TERM 252 448536 - 448548 + G 76 -6.3 -4.58663 | opp_overlap 448534 448536 TATAGTTAATAAGGA TGATG TAT CATCA TTTTTCCCAAATAAT TERM 253 448899 - 448872 - g 79 -4.2 -5.252 | opp_overlap 448880, overlap 448856 448874 448880 TATTTTTACAAAAAA TGCAAAAATTGG TGTG CCAATTCCTGAA AAGATGGCGACTGAT TERM 254 448891 - 448880 - g 73 -4.4 -4.95854 | opp_overlap 448880, overlap 448874 448872 CAAAAAATGCAAAAA TTGG TGTG CCAA TTCCTGAAAAGATGG FTM_0402 448273 - 450237 + | hypothetical membrane protein FTM_0403 450234 - 451118 + | glucokinase regulatory protein FTM_0404 451120 - 451512 + | hypothetical protein TERM 255 451521 - 451537 + T 74 -8.1 -3.63515 | CTACTAATATGTTTT GCTTTTT GAT AAAAAGC TTATTGAGCGTAAGC TERM 256 452568 - 452537 - T 77 -4.6 -5.24531 | gap 1, opp_overlap 452543 452544 452546, overlap 452544 ATTGTGTAGAAAAAA GATATAAC-ATTCTC TTT GAGAATGGTTTTACC GAACACGCTGCTACT TERM 257 452560 - 452544 - T 86 -9.5 -3.95724 | opp_overlap 452544 452543 452546, overlap 452537 AGAAAAAAGATATAA CATTCTC TTT GAGAATG GTTTTACCGAACACG TERM 258 452544 - 452560 + T 75 -9.5 -3.04398 | opp_overlap 452537 452544, overlap 452543 452546 AGAAAAAAGATATAA CATTCTC TTT GAGAATG GTTTTACCGAACACG FTM_0406 455540 - 454242 - | monovalent cation:proton antiporter-1 TERM 259 454393 - 454373 - G 73 -8.4 -3.56558 | TAATACTAACTATAA CATTACCT TCATC AGGTAATG ATAATGCCAATGCTA TERM 260 455400 - 455386 - G 72 -2.9 -5.2189 | GCAACTACTAAAAAA TTTGA TGGAC TCAAA AATGAGGCACATAGT TERM 261 455418 - 455406 - G 77 -9.1 -3.26405 | overlap 455403 TGGACTCAAAAATGA GGCAC ATA GTGCC GAAAAGGTTATTGAA FTM_0407 456275 - 455550 - | hypothetical protein trpS 457281 - 456277 - | tryptophanyl-tRNA synthetase TERM 262 457414 - 457430 + r 73 -9.5 -2.62983 | overlap 457417 TCGAACTCGCGACCC CAACCTT GGC AAGGTTG TGCTCTACCACTGAG TERM 263 457503 - 457519 + r 70 -8.7 -2.70275 | TCGAACCCCTAACCG CTCGGTT CGT AGCCGAG TACTCTATCCAGTTG coaE 458192 - 457578 - | dephospho-CoA kinase TERM 264 458463 - 458448 - g 89 -3.2 -5.83211 | opp_overlap 458443 458448 GAGCAAAAGAAAAAA TCTCCT CTCA AGGTGA TTTTATTACTGCTAC FTM_0412 458321 - 459457 + | hypothetical protein aceE 459757 - 462438 + | pyruvate dehydrogenase E1 component, homodimeric type aceF 462456 - 464039 + | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase TERM 265 464770 - 464756 - g 76 -6.4 -4.56775 | overlap 464758 ATGTGCGCCTAAAAA CAGCTG TAA CAGCTA TGGAAGCTAAAGAAG TERM 266 464958 - 464968 + G 77 -5.4 -4.87626 | opp_overlap 464958, overlap 464951 GCAATTACGTACAAA TGTG CCT CACA TTTTTGCTATTGGAG lpdA 464053 - 465477 + | pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase FTM_0416 466696 - 467343 + | MutT/nudix family protein FTM_0417 467361 - 467714 + | arsenate reductase FTM_0418 468073 - 467738 - | lipoprotein, putative TERM 267 468126 - 468103 - R 83 -6.8 -5.14477 | opp_overlap 468105, overlap 468105 TAGACAGTTAAAAAA TATTGGTAGA AAAC TCTACCAATT TTAATTATGCTAAAT TERM 268 468105 - 468124 + r 100 -9.4 -4.51174 | opp_overlap 468103 468105 GACAGTTAAAAAATA TTGGTAGA AAAC TCTACCAA TTTTAATTATGCTAA TERM 269 468124 - 468105 - R 88 -9.4 -4.19215 | opp_overlap 468105, overlap 468103 GACAGTTAAAAAATA TTGGTAGA AAAC TCTACCAA TTTTAATTATGCTAA FTM_0419 469886 - 468573 - | permease FTM_0420 471539 - 469953 - | aminotransferase FTM_0423 475700 - 474447 - | OmpA family protein fkpB 475892 - 476356 + | fkbp-type 16 kda peptidyl-prolyl cis-transisomerase lytB 476337 - 477293 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate reductase aroH 477295 - 477657 + | chorismate mutase pssA 477666 - 478487 + | phosphatidylserine synthase FTM_0428 478716 - 478492 - | lipoprotein, putative tolQ 478869 - 479576 + | group A colicin translocation; tolQ protein TERM 270 479619 - 479606 - g 72 -2.5 -5.23943 | overlap 479614 TATGAAAAAAAGAAA TAAAA GATT TTTTA GAAAACAGCGACCTA TERM 271 479899 - 479876 - g 75 -8.2 -3.78953 | opp_overlap 479865 AGGTGCATTAGCAAA TGCTGTGGTA AGTT TATCACAGCA AAATCCTGGTAAGCC tolR 479592 - 480032 + | group A colicin translocation; tolR protein tolA 480019 - 480906 + | group A colicin translocation; tolA protein tolB 480918 - 482225 + | group A colicin translocation; tolB protein FTM_0433 482235 - 482480 + | lipoprotein, putative pal 482499 - 483122 + | peptidoglycan-associated lipoprotein TERM 272 484860 - 484878 + G 73 -3.9 -5.15167 | TATGTTTATGATAAA TCAGGTT CTATT AATCTGA TTTTTGTTGCTACTG FTM_0436 484653 - 485375 + | short-chain dehydrogenase/reductase SDR FTM_0437 485438 - 485629 + | hypothetical protein FTM_0438 485610 - 487109 + | deoxyribodipyrimidine photolyase FTM_0440 488896 - 489825 + | bile acid symporter family protein TERM 273 489886 - 489864 - f 78 -6.5 -4.80959 | TAATTTAGAATAAAA TATCTAAAA AGTGG TTTTAGATA TCAAAATGAAGCCGG FTM_0442 490519 - 491277 + | domain of unknown function, putative FTM_0444 491814 - 492800 + | hypothetical protein TERM 274 493194 - 493204 + G 79 -5.4 -5.0916 | CGCTTGAAGAGAGTG GCTA TCT TAGC TTTTTATCTTACAGA FTM_0445 493061 - 494209 + | arsenite permease family protein FTM_0446 494610 - 494188 - | hypothetical protein FTM_0447 494989 - 494630 - | hypothetical protein ubiA 495857 - 495003 - | 4-hydroxybenzoate polyprenyl transferase ubiC 496366 - 495860 - | chorismate pyruvate lyase FTM_0450 496465 - 497172 + | ribonuclease PH FTM_0451 497549 - 497226 - | hypothetical protein TERM 275 497355 - 497365 + g 84 -5.4 -5.48514 | TATTTGTTTGATTTG CTCT TCG AGAG TTTTTCTTTGTTGAT TERM 276 497506 - 497522 + g 71 -3 -5.12617 | GTAGATGGTTTTTTT CTATCG CCTAA TGATAG TTTTTTACGTGGTTG htpX 499739 - 498666 - | Zn-dependent protease with chaperone function TERM 277 499724 - 499738 + g 72 -2.8 -5.37345 | opp_overlap 499726, overlap 499726 AGCCATATTCTAAAT TATCAG CAG CTGACA TTTTTTATAGTTCCA FTM_0454 500318 - 499743 - | LemA-like protein FTM_0456 501402 - 502457 + | hypothetical protein TERM 278 502961 - 502976 + T 71 -4.8 -4.79373 | overlap 502951 TTTAGTTGTTTTAGA CAAATA TTTA TATTTG TTTTATCTTATCTTG TERM 279 503310 - 503299 - T 72 -4.4 -5.09245 | TTAAAATCACAAAAA GGTA TACA TACC AATGATGAAGCCAAA TERM 280 503714 - 503702 - T 75 -4.9 -5.17353 | AGATTTACTAAAAAA TGTAT ATA ATACA AAAGTTATCGCTGAT FTM_0458 504218 - 503853 - | transcriptional regulator, ArsR family gpsA 505334 - 506332 + | glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) FTM_0461 506869 - 506333 - | hypothetical protein TERM 281 506562 - 506572 + g 73 -4 -5.03201 | GCAAACAAAGTATTT GAAA GGC TTTC TTTTTCCTTATTATT radA 508244 - 506874 - | DNA repair protein RadA FTM_0463 509022 - 508252 - | hypothetical protein FTM_0464 509618 - 509019 - | hypothetical membrane protein aroC 510679 - 509621 - | chorismate synthase TERM 282 510370 - 510382 + g 73 -4.1 -4.92385 | AATCAGCATGACCAG GACGA AAT TTGTC TTTTATTTCACTATA FTM_0466 511472 - 510819 - | hypothetical membrane protein TERM 283 511074 - 511063 - G 72 -5.8 -4.30043 | overlap 511060 ACAAAGCCAAAATAA CCAG CAAG CTGG TAAACTAAGTGATAG FTM_0467 511999 - 511487 - | peptide methionine sulfoxide reductase-related protein sodC 512160 - 512717 + | copper/zinc superoxide dismutase FTM_0469 512721 - 513512 + | sterol desaturase FTM_0470 514881 - 513487 - | amino acid transporter (AAT) family protein TERM 284 514852 - 514826 - G 73 -9.4 -2.93878 | opp_overlap 514822 514833 CAAGAGCCAATTATA CCGCCTAGAGCT ATT AGCTCTATGTGG CGAGGTTTTAGAGTT FTM_0472 515486 - 516598 + | Zn-dependent alcohol dehydrogenase FTM_0473 517837 - 516647 - | aspartate/tyrosine/aromatic aminotransferase TERM 285 517261 - 517281 + g 79 -8.4 -3.99444 | overlap 517275 TAAATAGATCTTTTT CTTTAGCA ACTTC TGCTAAAG TTTCTAGCTCTTGTT FTM_0474 518040 - 518927 + | cation diffusion facilitator (CDF) family protein recN 519013 - 520662 + | DNA repair protein RecN TERM 286 520743 - 520724 - T 71 -5.8 -4.41348 | gap 1 TTGGTGCTAAAGAAA GGTTGACAC ATG GT-TCAACC CCTACAAAAACTGTT TERM 287 520761 - 520782 + T 77 -7.3 -4.35524 | overlap 520763 TACAAAAACTGTTGT CATTCCCAC GTAG GTGGGAATC TTTTAGCTTTGCCCA TERM 288 520763 - 520780 + T 86 -9.9 -3.78026 | overlap 520761 CAAAAACTGTTGTCA TTCCCAC GTAG GTGGGAA TCTTTTAGCTTTGCC TERM 289 522388 - 522360 - T 75 -4.6 -5.06505 | overlap 522361 AACTATACACAAAAA GGTCATGCTGAA TTTAT TTCAGCATCACA CGATAGGCATTAATT TERM 290 522387 - 522361 - T 74 -8.1 -3.62276 | overlap 522360 ACTATACACAAAAAG GTCATGCTGAA TTTAT TTCAGCATCAC ACGATAGGCATTAAT FTM_0477 523306 - 522866 - | Type IV pili, pilus assembly protein TERM 291 523410 - 523395 - R 86 -6.1 -5.36441 | opp_overlap 523395 TTTGGATATAAAAAA GCCAC ATGAAA GTGGC TTAGTTTATCTACTG pilA 523844 - 523437 - | Type IV pili, pilus assembly protein TERM 292 524565 - 524578 + G 77 -5.9 -4.66537 | overlap 524566 ATGTTTGACAAGGTG TCGGC ATAT GCCGG TTTTATCTTAGCAAC lpxE 524226 - 524945 + | lipid A 1-phosphatase TERM 293 525564 - 525550 - g 73 -4.2 -4.86001 | AGTATGGTATAAAAA CAGAGG GGG CCTATG CAGTGGTTGTCGGCG TERM 294 525861 - 525847 - g 76 -10 -2.78018 | AGGTCGCAGCAATTA CTCCAG TAC CTGGAG GGGTTGGACCAATGA folD 525084 - 525932 + | methyleneTHF enzyme/ methenyltetrahydrofolate cyclohydrolase/ methylenetetrahydrofolate dehydrogenase TERM 295 525964 - 525981 + F 87 -11.3 -2.90212 | overlap 525966 TATCATGGGTAGTCA TACCCGC GTAG GCGGGTA TCTCTACACTAATGG TERM 296 525966 - 525979 + F 75 -9.5 -3.002 | overlap 525964 TCATGGGTAGTCATA CCCGC GTAG GCGGG TATCTCTACACTAAT TERM 297 526029 - 526012 - f 87 -11.3 -3.00017 | overlap 526009 GTTAAATCGAAAGGA TTCCCGC CTGT GCGGGAA TGACAAGTGTTTTTA purM 526166 - 527209 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 298 528254 - 528271 + G 70 -2.1 -5.36441 | gap 1, opp_overlap 528254 AAGCAGTCAAAAGAA GCTCTATT GCA AATA-AGC TTTTTTGTATAAGCA FTM_0482 527209 - 529521 + | saicar synthetase/phosphoribosylamine-glycine ligase purN 529525 - 530100 + | phosphoribosylglycinamide formyltransferase purE 530217 - 530708 + | N5-carboxyaminoimidazole ribonucleotide mutase purK 530712 - 531809 + | N5-carboxyaminoimidazole ribonucleotide synthase monomer FTM_0486 532159 - 531806 - | hypothetical protein prlC 534247 - 532226 - | oligopeptidase A TERM 299 532518 - 532530 + g 77 -3.5 -5.39721 | TTATAACTTGGCGTT TTAAT TAA ATTAA TTTTTTCTCTAATAC TERM 300 533207 - 533239 + g 72 -2.7 -5.24449 | overlap 533208 TAATGGAAAGTATTC TCTAAGTTCTTCTTC TGT GAAGTCGAATTTAGC TTTTTTGAGTTTCTC FTM_0488 534339 - 534710 + | 13 kDa major membrane protein FTM_0489 534786 - 535235 + | hypothetical protein FTM_0490 535392 - 535871 + | lipoprotein, putative TERM 301 535997 - 536021 + F 89 -9.5 -4.22009 | overlap 535991 536018 CATTTCCACTTATTT GTTAATAATAG TTA CTATTATTAGC TTTATGTTAGCTAGT FTM_0492 536507 - 536974 + | hypothetical protein TERM 302 537053 - 537020 - f 73 -8.3 -3.54129 | overlap 537004 GATATTTTTGCTAAA CTATCACAATTAAGT TTCA ACATATTTGTGATAG AAGTGATAAATTACC FTM_0493 537047 - 538489 + | hypothetical protein topA 540837 - 538543 - | DNA topoisomerase I TERM 303 540617 - 540630 + g 70 -2.3 -5.28481 | AGATAGATATTTTGA GCATC TTTA GCTGC TTTTTTGATTGCATC TERM 304 540888 - 540869 - H 72 -5.1 -4.83615 | opp_overlap 540856 GATTTTTTATAAAAA GAGTATT TATGTG AATACTC AGTGGTGATTTAATA parA 541036 - 541677 + | chmomosome partition protein A TERM 305 542511 - 542495 - g 70 -2.1 -5.26119 | overlap 542474 542496 CTTTTAAAAATAAAA GGTTCGC GTT GCGGAAC AAAAAATTATACATA parB 541670 - 542584 + | chromosome partition protein B FTM_0497 542598 - 543305 + | glutamine amidotransferase, class I FTM_0498 543308 - 544189 + | lipolytic enzyme rrmJ 545455 - 544835 - | 23S rRNA methylase FTM_0501 545613 - 546080 + | hypothetical protein lspA 546560 - 546075 - | signal peptidase II TERM 306 546134 - 546148 + g 71 -8.6 -3.08679 | overlap 546136 CAACACCACATGTGA TAGCTG AAT CAGCTA TATTAAATGACGGCC ileS 549354 - 546547 - | isoleucyl-tRNA synthetase ribF 550367 - 549447 - | riboflavin kinase/FMN adenylyltransferase TERM 307 549502 - 549524 + g 75 -7.2 -4.22226 | overlap 549496 TTGGATATTTGCAAT TTTAATTCTT CAA AAGAGTTAAA TTTCATTTCTGTTCT maeA 550518 - 552332 + | NAD-dependent malic enzyme TERM 308 552458 - 552469 + F 78 -4.4 -5.4505 | overlap 552447 TCAACAAGGTTTTCT TTGG TTTG CCAA TTTTTTATTAGAGGG FTM_0506 552495 - 554168 + | lipoprotein, putative TERM 309 554607 - 554639 + G 82 -4.1 -5.58074 | opp_overlap 554607 554608, overlap 554594 554608 ACAGTTACCAAGTAA CCTTTTTGCCTCAAG TAT CCTAAGGCAAAGAGC TTTTTTTGATGATTA TERM 310 554638 - 554608 - g 75 -9.8 -2.64199 | opp_overlap 554607 554608, overlap 554607 CAGTTACCAAGTAAC CTTTTTGCCTCAAG TAT CCTAAGGCAAAGAG CTTTTTTTGATGATT TERM 311 554608 - 554638 + G 76 -7.6 -3.93218 | opp_overlap 554608 554607, overlap 554607 CAGTTACCAAGTAAC CTTTTTGCCTCAAG TAT CCTAAGGCAAAGAG CTTTTTTTGATGATT FTM_0507 554185 - 555630 + | hypothetical protein FTM_0509 557523 - 558041 + | hypothetical protein TERM 312 559440 - 559456 + GF 72 -8 -3.50808 | overlap 559438 AAGTATGCTCATGTT GGAGGA CATAA TCCTCC TGTTATTGTAATACA engA 558258 - 559655 + | GTP-binding protein murA 559624 - 560928 + | UDP-N-acetylglucosamine enolpyruvoyl transferase TERM 313 561590 - 561569 - g 80 -10.9 -2.52543 | overlap 561576 AGTGTTTTCAAGCGA CCACAAGCA GATA TGCCTGTGG GAATTATGGTAGAGC murB 560936 - 561784 + | UDP-N-acetylmuramate dehydrogenase FTM_0513 561863 - 562738 + | hypothetical protein FTM_0514 563516 - 562740 - | hypothetical protein hitA 565045 - 564707 - | histidine triad (HIT) family protein ubiB 566709 - 565051 - | 2-octaprenylphenol hydroxylase TERM 314 566430 - 566445 + g 77 -6.2 -4.70169 | GCGGAACGTTATCTT GAAGTT TTGA AACTTC TTTTATTACATCTGG FTM_0518 567289 - 566702 - | hypothetical protein ubiE 568043 - 567291 - | ubiquinone/menaquinone biosynthesis methyltransferase UbiE glk 568137 - 569153 + | glucokinase ispZ 569997 - 569467 - | intracellular septation protein A family protein FTM_0522 570058 - 570672 + | Sua5/YciO/YrdC family protein FTM_0523 570722 - 571324 + | hypothetical protein FTM_0524 572544 - 571321 - | major facilitator superfamily TERM 315 571630 - 571620 - G 72 -2.6 -5.25772 | overlap 571609 571608 AAACGATAACAAAAA TATT ATC AATA AATGGTAATGCTAGG TERM 316 574925 - 574909 - R 70 -8.7 -2.62616 | overlap 574921 TCAGCTGGGAGAGCA TCGCCCT TAC AAGGCGA GGGTCGGGGGTTCGA FTM_0529 575832 - 575575 - | hypothetical protein TERM 317 575637 - 575653 + g 79 -4.5 -5.28481 | ATATCAAGCCTTTTC TATAAAG TAT CTTTGTA TTTTTTAGTTGAGTA TERM 318 577715 - 577696 - R 73 -9.2 -2.65808 | opp_overlap 577702, overlap 577693 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATCACCTCCTTA TERM 319 578538 - 578526 - R 79 -7.7 -4.2354 | GAAAGGTGAAAAGAA CCCTT ATA AAGGG AGTGAAATAGAATCT TERM 320 578575 - 578558 - R 74 -7.7 -3.72485 | AAATAGAATCTGAAA CCGCTTG CATA CAAGCAG TAGGAGCATGATTTA TERM 321 579840 - 579827 - R 71 -4.5 -4.7254 | ACTGTTTATCAAAAA CACAG CACT CTGCG AAATCGTAAGATGAA TERM 322 580982 - 580966 - R 73 -9.5 -2.59935 | overlap 580965 AAATATCTTTATAAC CCAAAAC ACA GTTTTGG CGATGATAGCTTGTA FTM_0536 583544 - 582489 - | hypothetical protein TERM 323 582933 - 582945 + g 77 -4.9 -5.08824 | TCCATAGTAGTATTT TATAG GCT CTATA TTTTTTAGATCGAAG FTM_0537 584333 - 583677 - | metallopeptidase, M50B family TERM 324 584608 - 584597 - H 72 -4.4 -5.09245 | TTAAAATCACAAAAA GGTA TACA TACC AATGATGAAGCCAAA TERM 325 585012 - 585000 - H 75 -4.9 -5.17353 | AGATTTACTAAAAAA TGTAT ATA ATACA AAAGTTATCGCTGAT TERM 326 585168 - 585196 + H 72 -8.4 -3.36054 | opp_overlap 585166, overlap 585166 TTTGATAGAGAATTT CTTTTCTAAAAT TAAGC ATTTTAGAAGAG TATTCTCTAGATTTG FTM_0538 586480 - 586815 + | hypothetical protein psd 587639 - 586788 - | phosphatidylserine decarboxylase, proenzyme FTM_0540 587739 - 588719 + | hypothetical protein TERM 327 589706 - 589696 - g 70 -4 -4.93696 | opp_overlap 589687, overlap 589687 CTCAAATATTAAAAA TATC TGT GATA GAATGTTAGAAGATC FTM_0541 588728 - 589771 + | bifunctional NMN adenylyltransferase/Nudix hydrolase glmU 589785 - 591152 + | UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase glmS 591173 - 593011 + | Glucosamine-fructose-6-phosphate aminotransferase rpsU1 593809 - 593612 - | 30S ribosomal protein S21 cspC 594012 - 593809 - | cold shock protein, DNA-binding TERM 328 593889 - 593871 - G 71 -7.4 -3.67622 | opp_overlap 593869 593871 593874 GAGTTTCAAAAGTAA CTTGCTGA CCT TCAGCTAG TGTTTCACCATTTAA FTM_0547 594590 - 594261 - | hypothetical protein TERM 329 595343 - 595313 - g 72 -9.2 -2.71745 | overlap 595312 595315 595329 GTTTGAAGAAGGAAT GATATTTACAATCG AAC CGATGATAAATATC GGTAAAAGAGCAGTG map 594717 - 595487 + | methionine aminopeptidase, type I TERM 330 596247 - 596261 + G 81 -5.8 -5.00616 | opp_overlap 596246 TGGCTTTAAGGATAT TCTAAA AAC TTTAGA TTTTTTACAAAGAAA FTM_0549 595489 - 596337 + | hypothetical protein TERM 331 597376 - 597360 - g 70 -7.3 -3.87869 | TTAAGCCTGTACAAA GACGTAT TAT ATACGCC ATGAGTGAAATTGGT parC 597224 - 599449 + | DNA topoisomerase IV, A subunit mtn 599449 - 600135 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase FTM_0553 600721 - 600122 - | hypothetical membrane protein TERM 332 600700 - 600675 - G 71 -7.7 -3.68836 | opp_overlap 600682, overlap 600677 600682 ATTCTTAAAATAAGA TAGACAACAAA GAGG TTTGTTGTCAA AAGGTTATAATTATT TERM 333 600698 - 600677 - G 85 -10.3 -3.41798 | opp_overlap 600682, overlap 600675 600682 TCTTAAAATAAGATA GACAACAAA GAGG TTTGTTGTC AAAAGGTTATAATTA FTM_0554 601832 - 600714 - | BNR/Asp-box repeat protein TERM 334 602161 - 602151 - g 73 -4 -5.1101 | opp_overlap 602151 GCATTAGCTAAAAAA GATT ATA AATC ATATTATTATTATAA slt 602031 - 604007 + | soluble lytic murein transglycosylase FTM_0556 604656 - 604021 - | hypothetical protein TERM 335 604246 - 604230 - G 70 -8.1 -3.16881 | TAGCTATTCCATTAA TATTGGT ATA ACCAATA CCAAGTCCAGCAGCA FTM_0557 605009 - 606163 + | hypothetical membrane protein TERM 336 609139 - 609127 - g 84 -5.5 -5.52096 | opp_overlap 609127 AAAGTTAATAAAAAA GCGCT TGA AGCAC TATGTTATGCAGGCG TERM 337 609870 - 609858 - g 74 -3.5 -5.2853 | TATCCAAAAACAAAA TATTT TAG AAATA ACGGTTTCTCTTGGT FTM_0558 606520 - 609999 + | DNA polymerase III subunit alpha TERM 338 611396 - 611384 - f 76 -3.5 -5.46657 | TATTGCAAGAAAAAA TTTAA TGT TTAAA AGCTTACCACTATTT FTM_0560 611388 - 612650 + | ABC transporter, involved in lipoprotein release, permease component FTM_0561 612643 - 613338 + | ABC transporter, ATPase component TERM 339 613358 - 613388 + F 74 -5 -5.00138 | overlap 613379 AGATCATAGTTGCTA TATTTTTCTATTAT ATT ATGATAAAAAAATA TTTTTAATTTAGGTA gcvT 615688 - 616764 + | glycine cleavage complex protein T (aminomethyltransferase) gcvH 616821 - 617204 + | glycine cleavage system H protein (lipoate-binding) gcvP1 617269 - 618636 + | glycine cleavage system P protein, subunit 1 gcvP2 618642 - 620087 + | glycine cleavage system P-protein, subunit 2 FTM_0567 621052 - 620207 - | shikimate 5-dehydrogenase glgX 624290 - 621078 - | pullulanase TERM 340 622925 - 622937 + g 82 -3.4 -5.68489 | CTGTTAGCTCATGGA CAAC ATCTG GTTG TTTTTTATTGTTGTC glgB 626246 - 624324 - | 1,4-alpha-glucan branching enzyme TERM 341 626606 - 626593 - g 70 -3.8 -4.8622 | TTTGCTAATCAAAAA CCAG GTACAT CTGG ATTACGAAATAAAGT pgm 626548 - 628182 + | phosphoglucomutase glgC 628216 - 629487 + | glucose-1-phosphate adenylyltransferase TERM 342 630001 - 629990 - g 70 -4.4 -4.67168 | opp_overlap 629981, overlap 629981 AAAAAGCTGTAAAAA CAGT GTTC ACTG TGCATAACCTTGCTT TERM 343 630938 - 630926 - g 71 -3.5 -5.0538 | CTTCAGCTGAAAAAA TATAT CAA ATATA TAAGAATTTAGTCAG glgA 629497 - 630966 + | glycogen synthase TERM 344 631004 - 630960 - f 83 -7.6 -4.55287 | opp_overlap 630955 630969 630971 630999, overlap 630963 630969 TTTAGTCAGAGAAAA TAATTAAAATATTTTCTATA TCTTG TATAGAAAATGTTTTAATGA CATTATATTCTTTAT TERM 345 631001 - 630963 - f 100 -9.3 -4.38744 | opp_overlap 630955 630969 630971 630999, overlap 630960 630969 AGTCAGAGAAAATAA TTAAAATATTTTCTATA TCTTG TATAGAAAATGTTTTAA TGACATTATATTCTT TERM 346 630969 - 630995 + F 74 -6.8 -4.28762 | opp_overlap 630969 630963 630960, overlap 630955 630971 AGAAAATAATTAAAA TATTTTCTATAT CTT GTATAGAAAATG TTTTAATGACATTAT TERM 347 630971 - 630993 + F 71 -7.2 -3.74158 | opp_overlap 630969 630963 630960, overlap 630955 630969 AAAATAATTAAAATA TTTTCTATAT CTT GTATAGAAAA TGTTTTAATGACATT glgP 631071 - 633344 + | glycogen phosphorylase malQ 633388 - 634851 + | 4-alpha-glucanotransferase glyQ 634943 - 635833 + | glycyl-tRNA synthetase, alpha subunit TERM 348 635851 - 635863 + F 72 -6.3 -4.2717 | AAATGCTTTCGCTAA CTTAC GAT GTAAG TTTTAGTGACATACT murE 636044 - 637483 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase FTM_0577 637563 - 637922 + | outer membrane lipoprotein murF 638274 - 639632 + | d-alanyl-d-alanine-adding enzyme FTM_0579 639641 - 640459 + | hypothetical protein TERM 349 641006 - 641016 + F 78 -4 -5.42131 | opp_overlap 641006, overlap 641012 TGAGTCTTTTGATAA TTCT CTG AGAA TTTTTTCTCTAATTA TERM 350 641745 - 641731 - g 70 -2.2 -5.26316 | CTACTGCAGAAAAAA TAAAAA ATG TTTCTA ATATTATAAACTGTA TERM 351 643588 - 643611 + G 74 -3.2 -5.31275 | overlap 643584 643589 CTTTGAGCTATTTGT TTACACAATT AAAT AATGGTGTAG TTTTTTCTGATGCAG thrA 641682 - 644102 + | aspartate kinase I/homoserine dehydrogenase I TERM 352 645000 - 644984 - g 75 -8.1 -3.71883 | opp_overlap 644986, overlap 644974 CAAGATAAGTTTAAA GAGTTTA ACT TAAACTC TAATAGTTGGATAAG thrB 644105 - 645058 + | homoserine kinase TERM 353 646364 - 646341 - f 83 -7.6 -4.53303 | gap 1, opp_overlap 646341 GAGGTTTATACAAAA GCTTTTGAAGC TTA GCTT-AAAAGC GGATGTGATCTGATT TERM 354 646371 - 646387 + F 79 -7.3 -4.42806 | overlap 646364 CTTAAAAGCGGATGT GATCTGA TTT TCAGGTC TTTCTTTAACAATAA TERM 355 646920 - 646884 - f 85 -11.1 -3.1352 | overlap 646882 CTTTAATTTAATATA GCACTTAGGCTTTTT GACTAGA AAAAAGTCTAAGTGC GCCCCAAATAGGAGA TERM 356 646977 - 646963 - g 71 -8.6 -3.02187 | ATTCAAAATACTACA GCTATC CTA GATAGC AACTTAAAAAATAAA FTM_0585 646942 - 647430 + | S-adenosylmethionine decarboxylase FTM_0586 647430 - 648299 + | putative spermidine synthase TERM 357 649514 - 649524 + G 71 -3.2 -5.17353 | AAAAATTTCCGATAC TTCC TTT GGAG TTTTTTAATAGCTAT FTM_0587 648325 - 649734 + | putative arginine decarboxylase TERM 358 651069 - 651045 - g 70 -4.3 -4.7078 | TCAAGCAGCTAAAAA TGGTGCAAAAA TAA TTCTTACCCCA GAGTTACCAAGTTAT TERM 359 651154 - 651134 - g 75 -6.9 -4.19817 | TTGATTTAGCTAAAA CCATTGATG AAT CACCAATAG TAAAATTATATAAAC TERM 360 651338 - 651322 - g 70 -8.1 -3.14931 | GGTATTGGTTACCAA GAGAAAT ATT ATTTCTC ACCTGGAAGTGCTGG FTM_0589 650944 - 651804 + | hydrolase, carbon-nitrogen family lpxH 652537 - 651821 - | UDP-2,3-diacylglucosamine hydrolase pyrE 653153 - 652527 - | orotate phosphoribosyltransferase TERM 361 653763 - 653779 + G 75 -5.1 -4.89477 | GGTGTTTCATCACGT TACACAG ATT CTGAGTA TTTTGTTATTGAAGC mpl 653313 - 654683 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase FTM_0594 656238 - 656537 + | transcriptional regulator, ArsR family TERM 362 657448 - 657434 - f 82 -8.6 -3.89614 | CGTAACTGTTATAAA TCACCA TAG TGGTGA CAAATATAGCGAAAG TERM 363 659452 - 659440 - g 80 -6.3 -4.68124 | TGAAGAGAGACAAAA CAATC CAA GATTG AAGGTTAAGTCACCA FTM_0597 658880 - 659566 + | Zn-dependent hydrolase FTM_0599 660929 - 660309 - | oxidoreductase FTM_0600 661418 - 660969 - | hypothetical protein TERM 364 661027 - 661052 + g 95 -4.1 -6.28967 | gap 1, opp_overlap 661034 661036, overlap 661034 661036 ACATCTAGTTCATAT TCAGAAATAGCA AAA TGCT-TTGCTGA TTTTTTTTGTTTGTG FTM_0602 662566 - 662165 - | hypothetical protein nusB 662753 - 663178 + | transcription antitermination factor NusB FTM_0604 663932 - 663162 - | carbon-nitrogen hydrolase FTM_0605 664101 - 664514 + | lipoprotein, putative TERM 365 665526 - 665544 + T 81 -10.4 -3.06261 | TTATTTATTGTATTA GCTATCTT TTT AAGATAGC TGTTAACACTTAAAA FTM_0607 667192 - 666059 - | aspartate/tyrosine/aromatic aminotransferase proS 669035 - 667338 - | prolyl-tRNA synthetase TERM 366 668226 - 668237 + g 70 -4.4 -4.7329 | AATATCAAAGCTCAT CTCT TTAT AGAG TTTTTCGATAGTTTT TERM 367 669543 - 669556 + r 82 -5.3 -5.35224 | TATAGATAATAGACC TAGCA TCTT TGCTA TTTTATTTTTATCAG TERM 368 669757 - 669767 + r 72 -4 -5.1244 | CTCCAAGTTGTTGTA TCTT GGT AAGA TTTTTATGTTCGTGA FTM_0609 671291 - 671064 - | hypothetical protein FTM_0610 672159 - 671623 - | disulfide bond formation protein, DsbB family TERM 369 671705 - 671685 - G 77 -9.9 -3.14468 | opp_overlap 671684 671689, overlap 671689 GTGGACCACATTCAA CAAATACAT TTA ATGTATTTG CTACTGTTAGGATTA TERM 370 671974 - 671952 - G 82 -7.9 -4.46267 | opp_overlap 671952 ATAATGCAACTAAAA TTATAAGCA GATAA TGCTTATAA TTATTGCCGTGAGTT TERM 371 671952 - 671974 + g 71 -7.9 -3.6579 | opp_overlap 671952 ATAATGCAACTAAAA TTATAAGCA GATAA TGCTTATAA TTATTGCCGTGAGTT sufE 672866 - 673282 + | sulfur acceptor protein SufE FTM_0613 673283 - 674032 + | uroporphyrinogen III synthase FTM_0614 673998 - 675083 + | hypothetical membrane protein TERM 372 676147 - 676165 + G 79 -4.6 -5.24531 | opp_overlap 676139 676147 AGAATTAGAAAAGTA CTTTCATA TTT TATGTAAG TTTTTTATAAAAAAT FTM_0615 675080 - 676237 + | hypothetical membrane protein gloB 676251 - 677009 + | hydroxyacylglutathione hydrolase FTM_0617 677794 - 677087 - | hypothetical protein TERM 373 677566 - 677576 + g 84 -4 -5.71983 | TATTATCTAGTGTTT TCAA TTT TTGA TTTTTTTCTGCTTGC feoA 677903 - 678127 + | Fe2+ transport system protein A TERM 374 678618 - 678602 - g 70 -8.1 -3.15861 | opp_overlap 678602 678595 678604 TAGCATTGCTATGAA TAGTTTG GGG CAAACTA TCTATAATTTAGAAA FTM_0619 678144 - 679778 + | hypothetical protein TERM 375 679932 - 679916 - T 73 -9.5 -2.62983 | overlap 679919 CTCAGTGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCGA FTM_0623 681003 - 680350 - | prophage repressor protein FTM_0624 681172 - 681558 + | hypothetical protein FTM_0625 682441 - 681572 - | drug/metabolite exporter gltB 682618 - 684204 + | glutamate synthase domain 2 TERM 376 684607 - 684624 + GF 76 -9.9 -2.81464 | opp_overlap 684605 684604 GGAAAAAAACACTCA TTCCCAC GCAG GTGGGAA TCTCATAGCTGATGG TERM 377 685574 - 685556 - gf 74 -3.1 -5.31456 | CCAACTGATAAAAAA CTGCCAT GCTCA ATCGCAG ATAGAACGCTACTTG TERM 378 686193 - 686179 - gf 71 -7.2 -3.77722 | GCCAATTATTAATAA CCATTT TTT AAATGG TAAGGTGACTTTTTG recC 684281 - 687520 + | exodeoxyribonuclease V, gamma subunit FTM_0628 687462 - 688034 + | hypothetical protein TERM 379 688650 - 688635 - g 72 -6.2 -4.39828 | opp_overlap 688635 AACATCGTTAGAAAA CTTTGA TGTT TCAAAG TTTAGAAAGTTTCTA FTM_0629 688177 - 689565 + | ATP-dependent DNA helicase TERM 380 690448 - 690435 - gf 77 -5.3 -4.89562 | GCAAAACTAATAAAA CCAAT TTTT ATTGG CGTAAAAGAATTAAG TERM 381 690811 - 690794 - gf 74 -7.7 -3.78629 | overlap 690792 ATTAAATTTAAAAGA TACCCGC TTAT GCGAGTA TGACAGTAGTTCTGA TERM 382 691134 - 691123 - gf 82 -3 -5.61596 | ATGCTGATAAAAAAA CAAA AGAT TTTG ACGATAATTTTAAAC TERM 383 692249 - 692231 - gf 77 -4.7 -5.05782 | ATTTAGTTTAAAAAA TTTATCT AGCAA AGATAAA AATTCTGATTATGAT recB 689637 - 693290 + | exodeoxyribonuclease V, beta subunit recD 693256 - 695124 + | exodeoxyribonuclease V, alpha subunit FTM_0632 695903 - 695133 - | regulatory factor, Bvg accessory factor family panD 696242 - 695907 - | aspartate 1-decarboxylase panC 697021 - 696236 - | pantoate-beta-alanine ligase TERM 384 696940 - 696954 + g 85 -4.3 -5.72254 | GTAGAGCTCCCATTG TAGGT ACAAA ACCTA TTTTTTGTTGTTTAA panB 697805 - 697008 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase FTM_0636 698523 - 697807 - | hypothetical protein TERM 385 698081 - 698094 + g 73 -4.5 -4.89729 | opp_overlap 698073 GCTAAAACACACATT GCGTG ATAG TACGC TTTTTGACTTTTATC TERM 386 698563 - 698588 + H 75 -7.1 -4.12188 | gap 1 AACTAAAACTGTTAT TATTG-CCTTTT TAA AAAAGGTCAATA TTTTACAAATCATAA ligA 698831 - 700867 + | DNA ligase, NAD-dependent TERM 387 702184 - 702202 + F 76 -7.6 -3.99678 | opp_overlap 702184 TTCACATCCAAATAA TTTATCAT TAG ATGATAAA TTTACTTATAAAGCT TERM 388 702202 - 702184 - f 76 -7.6 -3.98913 | opp_overlap 702184 TTCACATCCAAATAA TTTATCAT TAG ATGATAAA TTTACTTATAAAGCT TERM 389 702540 - 702564 + G 70 -4.3 -4.65895 | opp_overlap 702541, overlap 702541 AAAAGATAATGAGAT ACTCTTTTCAA CCG TTGAACAGAGG TTTTTAGGTAAAGGA FTM_0639 702322 - 702813 + | acetyltransferase sun 704071 - 702791 - | tRNA and rRNA cytosine-C5-methylase, sun protein TERM 390 702854 - 702830 - G 70 -4.2 -4.81163 | TAAACAGTAATAAAA GCCATCACCA TCTTG TTGAGATGGC AGTAATTGATAGCCA FTM_0641 704859 - 704071 - | inositol-1-monophosphatase FTM_0643 707083 - 705884 - | major facilitator superfamily FTM_0644 707205 - 707891 + | hypothetical protein FTM_0645 708165 - 707881 - | hypothetical protein TERM 391 708204 - 708190 - R 90 -7.1 -5.36441 | opp_overlap 708190 TTGGTATATAAAAAA GCCAC AGAAA GTGGC TTATCGAACTGGTTA fabF 709504 - 708245 - | beta-ketoacyl-ACP synthase II TERM 392 709562 - 709543 - R 79 -5.1 -5.26316 | opp_overlap 709543 TCATTGTAGAAAAAA GTATGAA ATCGTA TTCATAC TGACTTTAAGATTAA acpP 709868 - 709584 - | acyl carrier protein fabG 710707 - 709964 - | beta-ketoacyl-ACP reductase fabD 711641 - 710721 - | malonyl-CoA:ACP transacylase fabH 712660 - 711689 - | 3-oxoacyl-[acyl-carrier-protein] synthase 3 TERM 393 711853 - 711870 + g 76 -2.7 -5.43866 | overlap 711855 GTGTTGTAACAACTT TAGACAT TGGC ATGTCAA TTTTTTTGGCAGTTG TERM 394 712724 - 712704 - R 95 -7.6 -5.66229 | overlap 712697 ATTAACAACAAAAAA CCATAAGC TTTTC GCCTATGG CTCAATATTTATTGT plsX 713803 - 712757 - | fatty acid/phospholipid synthesis protein PlsX TERM 395 713355 - 713367 + g 71 -6.3 -4.21811 | AGCATATAAGTTTTA CTAAG TTG CTTAG TTTCTCTATTGAATG TERM 396 713618 - 713634 + g 80 -6.7 -4.77719 | AATAGCTATTCTTTG TAAAACT GGT AGTTTTA TTTTCTTGACTTTTG rpmF 714084 - 713902 - | 50S ribosomal protein L32 TERM 397 714145 - 714161 + r 71 -3 -5.1764 | ACTTGAGTGTTTTAA GAATCT CAAAA GGATTC TTTTTCTCTTGTATA FTM_0653 714631 - 714128 - | hypothetical protein TERM 398 715082 - 715066 - g 70 -4.3 -4.71061 | overlap 715068 AGTTACACTCAAAAA CTCCAGG GCA CCCTGAG TATGGCTATACGCCA TERM 399 715479 - 715455 - g 70 -4.3 -4.65895 | GTTGCGATTGAAAAA GCTATAAATGA AGC TCATTCTCAGC AGCAAAAACCAACTT TERM 400 716512 - 716532 + G 100 -9.1 -4.77036 | opp_overlap 716493 TAAAATTAAATGTTG CTTCTATAC CGT GTGTAGAAG TTTTTGCTACTCAAG FTM_0654 714771 - 717800 + | fusion protein of transketolase 1, tktA, and Glyceraldehyde-3-phosphate dehydrogenase, gapA pgk 717819 - 718997 + | phosphoglycerate kinase pyk 719013 - 720449 + | pyruvate kinase fbaA 720465 - 721529 + | fructose-bisphosphate aldolase, class II, Calvin cycle subtype TERM 401 722249 - 722265 + F 73 -8.1 -3.43492 | opp_overlap 722251 GAAAATTCTGTGAAC CATTTAC CTA GTAAATG TTCTAATCCATATAA TERM 402 723412 - 723402 - f 86 -5.4 -5.64274 | GGAGCCATAAAAAAA CCAA TCA TTGG AAAAAGTAAGGCTAT TERM 403 724632 - 724602 - g 83 -7 -4.77986 | CTAAAGATGCAAAAA TCTTCAAAAAAACC TTT GGTTTCTATAAAGA ACCTATCTAAACAAT potG 724593 - 725714 + | ATP-binding cassette putrescine uptake system, ATP-binding protein potH 725714 - 726595 + | ATP-binding cassette putrescine uptake system, membrane protein, subunit H TERM 404 726669 - 726687 + G 82 -7.5 -4.63172 | ATCTTTTTATATATT CCACTAA TAATT TTAGTGG TTTTCTCATTTAGTA TERM 405 726862 - 726892 + G 77 -3.4 -5.40625 | overlap 726864 TAATTGCTTATGCTA TGACTAGATTTAAA TTC TTTAGATCTAGAAA TTTTTTATATGGTCT potI 726609 - 727415 + | ATP-binding cassette putrescine uptake system, membrane protein, subunit I TERM 406 727667 - 727639 - f 72 -8.4 -3.36054 | opp_overlap 727637, overlap 727637 CAAATCTAGAGAATA CTCTTCTAAAAT GCTTA ATTTTAGAAAAG AAATTCTCTATCAAA TERM 407 727823 - 727835 + F 75 -4.9 -5.17353 | ATCAGCGATAACTTT TGTAT TAT ATACA TTTTTTAGTAAATCT TERM 408 728227 - 728238 + F 72 -4.4 -5.09245 | TTTGGCTTCATCATT GGTA TGTA TACC TTTTTGTGATTTTAA aroA 728464 - 729741 + | 3-phosphoshikimate 1-carboxyvinyltransferase FTM_0664 729744 - 730334 + | hypothetical protein TERM 409 730497 - 730487 - g 74 -6.8 -4.4078 | overlap 730488 TGGCCGCAATCAAAA CGCT CCA AGCG CTTAAAAGAAAGTGT rnhA 730309 - 730767 + | Ribonuclease H ansA 730769 - 731806 + | L-asparaginase 1 cynT 731877 - 732563 + | carbonic anhydrase TERM 410 732614 - 732600 - T 70 -5.8 -4.26327 | opp_overlap 732597 732600, overlap 732597 TATTTATCAAAATAA CTTATA TTA TATAAG TAATATATGACTATA TERM 411 732771 - 732817 + T 90 -7.6 -5.09259 | opp_overlap 732770, overlap 732772 732807 TATTTAGTATTCAAT GTGATATTTTTATCTGTAGCTA TTA TATCTATAGATTAAAATATCAA TTTTATTTTGGAATG TERM 412 732772 - 732816 + T 90 -11.1 -3.64471 | opp_overlap 732770, overlap 732771 732807 ATTTAGTATTCAATG TGATATTTTTATCTGTAGCTA TTA TATCTATAGATTAAAATATCA ATTTTATTTTGGAAT FTM_0668 733455 - 732850 - | hypothetical membrane protein FTM_0669 734391 - 733519 - | hypothetical protein rubA 734570 - 734400 - | rubredoxin FTM_0671 735274 - 734657 - | hypothetical protein TERM 413 734851 - 734869 + g 76 -4.6 -5.17353 | opp_overlap 734851 TTTTGTTGACAACAC TTTCATGA CAA TCAAGAAA TTTTTTAATGCGTAT FTM_0672 735386 - 736777 + | hypothetical protein FTM_0673 738083 - 736809 - | dicarboxylate/amino acid:cation (Na+ or H+) symporter FTM_0674 738285 - 739313 + | phosphosugar binding protein TERM 414 739614 - 739632 + G 79 -5.4 -5.0809 | overlap 739615 ATCACAGCATCTGGA TTGATATT TAC AATATCAG TTTTTATGATTTATT FTM_0675 739338 - 740741 + | MFS family major facilitator transporter FTM_0676 740895 - 741014 + | hypothetical protein FTM_0677 741128 - 741436 + | IS1 transposase TERM 415 743747 - 743731 - g 90 -3.8 -5.88197 | TCAAAGATAAAAAAA TAAACT GGAAT AGTTTA GTGTATAGACTAGCA FTM_0679 743655 - 743834 + | hypothetical protein TERM 416 745057 - 745045 - f 71 -5.5 -4.40311 | opp_overlap 745053 AGAAAGAATTTAAAA CCAAC TAG GCTGG ATTAGCTATATCTAT TERM 417 745416 - 745434 + F 78 -3.2 -5.55664 | CTGTTTCAAAAAACT CTAGATTT GTA AGATTTAG TTTTTTTGCTAATAA TERM 418 746256 - 746245 - g 73 -4.4 -4.96762 | CAGAGATTATAAAAA TTGC AATA GCAA ATGATAAGCCTGTGC ispG 745851 - 747068 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase FTM_0683 747083 - 747790 + | hypothetical protein TERM 419 748677 - 748666 - g 73 -4.4 -4.86293 | opp_overlap 748666 TAACAAAAATCAAAA TAGC AGCT GCTA TTTCTTAATGATTGA TERM 420 749401 - 749413 + G 71 -3.3 -5.093 | overlap 749402 TCAAGAATCTCCTAC AGGTC ATG GACCA TTTTATTGTTTTGAA FTM_0684 747809 - 749602 + | X-prolyl aminopeptidase 2 TERM 421 749647 - 749633 - f 71 -5.8 -4.40199 | opp_overlap 749626, overlap 749626 AAAAACAGTAAGAAA TTCTTA TTT TAAGAA AAAAGTTAATAGTTT TERM 422 749801 - 749817 + G 80 -2.9 -5.75945 | overlap 749803 749804 AGCTTTAACTATTGG TGGCGGA TTT TCCGGTA TTTTTTTTGACAAGT FTM_0685 749700 - 750764 + | DNA/RNA endonuclease G FTM_0686 751618 - 750755 - | beta-lactamase class A FTM_0688 753606 - 753187 - | hypothetical protein TERM 423 753584 - 753598 + g 76 -3.6 -5.31158 | ATTAATAGTAATGTT GATAGT GTA ATTATC TTTTTCATTTTTTTC lnt 755342 - 753852 - | apolipoprotein N-acyltransferase FTM_0690 756184 - 755342 - | transporter-associated protein, HlyC/CorC family TERM 424 756093 - 756118 + g 79 -8.5 -3.86063 | gap 1 ACCTCATTAGCAGCA GCTC-TATTGAT AGC ATCAATAAGAGC TTCTTCACTTTTTAT FTM_0691 756662 - 756174 - | hypothetical protein FTM_0692 757638 - 756655 - | PhoH family protein, putative ATPase TERM 425 757525 - 757511 - G 75 -10 -2.65354 | overlap 757508 GTGATCTCAAACTCA TCGGCA CGA TGCCGA ATCTCGACATCAAAA miaB 758970 - 757642 - | tRNA-methylthiotransferase MiaB protein TERM 426 757737 - 757747 + g 74 -5.4 -4.79752 | opp_overlap 757737 757732 CACCCTTAAAGTTAA CAAC TCT GTTG TTTTCTGTTCTTCCA TERM 427 757768 - 757779 + g 76 -4.4 -5.1615 | overlap 757756 757776 TGTTCTTCCAGAGAG GATG TTAT CATC TTTTTTAGATGTTCC TERM 428 758072 - 758084 + g 70 -6.9 -3.79813 | opp_overlap 758072 758069 GAAATTGTAATATCA GGGCG AAT CGCTC TTAATTTTCTAATTT FTM_0694 759193 - 759867 + | O-methyltransferase family protein TERM 429 759904 - 759914 + F 71 -3.2 -5.19275 | TATTAATCTTTGTGA TTGC TAT GCAG TTTTGTTTTGTCACT TERM 430 760397 - 760385 - f 75 -4.9 -5.04325 | TCCAAAGGACAAAAA TTCAA GGT TTGAA GCGGTTAAATCAGGT tdk 760619 - 761212 + | thymidine kinase FTM_0697 761719 - 761255 - | hypothetical membrane protein TERM 431 761842 - 761828 - H 70 -5.8 -4.2535 | opp_overlap 761828 AGATGATAGTTAAAA TTTTCT ATT AGAAAA TTGTTAAATAAATAA TERM 432 762328 - 762299 - g 93 -10.1 -4.26079 | opp_overlap 762298 762319 GCAAATGATCGAAAA TCTGAGAAAGCAG TTTG CAACTTTCTCAGA AGTTGATAAAGTTGT tig 761874 - 763190 + | trigger factor (TF) protein (peptidyl-prolyl cis/trans isomerase) clpP 763216 - 763821 + | ATP-dependent Clp protease, proteolytic subunit ClpP clpX 763845 - 765098 + | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 433 765694 - 765679 - g 91 -2.6 -6.04324 | gap 1 CTAAAAAACAAAAAA TCC-TTG AGG CAACGGA TATAAAAAATAAAGC lon 765123 - 767447 + | ATP-dependent protease La hupB 767534 - 767806 + | DNA-binding protein HU-beta TERM 434 767839 - 767858 + F 100 -8.6 -6.06529 | opp_overlap 767839 GTAATTTTTTTTAAA GGCATGCT TAAC AGTATGCC TTTTTTTTATCTATA TERM 435 768005 - 768015 + G 73 -4 -5.04987 | TTTTTGTAATTTCTG GAAT GAC ATTC TTTTTTACAAATATT FTM_0703 767920 - 769353 + | hypothetical protein miaA 769354 - 770280 + | tRNA delta(2)-isopentenylpyrophosphate transferase hfq 770391 - 770720 + | host factor I for bacteriophage Q beta replication hflX 770769 - 772079 + | protease, GTP-binding subunit FTM_0707 773268 - 772090 - | oxidoreductase TERM 436 773484 - 773471 - g 70 -3.9 -4.88217 | ATTAAAAAACTAAAA CAAAA ATGG TTTTG GAGTAAAAATTCGGA hflK 773453 - 774520 + | HflK-HflC membrane protein complex, HflK hflC 774522 - 775448 + | HflK-HflC membrane protein complex, HflC wzb 775449 - 775934 + | low molecular weight (LMW) phosphotyrosine protein phosphatase engB 775931 - 776524 + | ATP/GTP-binding protein FTM_0712 778773 - 777577 - | predicted ATPase of the PP-loop superfamily serA 780009 - 778774 - | D-3-phosphoglycerate dehydrogenase thyA 780845 - 780021 - | thymidylate synthase lgt 781636 - 780830 - | prolipoprotein diacylglyceryl transferase rne 784308 - 781651 - | ribonuclease E TERM 437 782684 - 782698 + g 73 -4.2 -4.91084 | ACTATATCTACTTGA GCATCA GTT TGAGGC TTTTGTTCTTGAGTG TERM 438 784102 - 784114 + g 89 -3.4 -5.7946 | opp_overlap 784102 TGATACTTCTTTAAA TGGT AAAAA ACCA TTTTTTTCTTCACCA TERM 439 784374 - 784387 + H 80 -6.7 -4.72497 | GCCAACTCGCTTTGT GACCA ATTT TGGTC TTTTCTTAATAAATC TERM 440 785182 - 785195 + G 74 -2.4 -5.4251 | overlap 785180 CATAAGTTATATGCA CCAA AAGGTG TTGG TTTTTTGTATCTAAG iscS 784558 - 785733 + | cysteine desulfurase FTM_0718 785726 - 786055 + | hypothetical protein recO 786039 - 786737 + | RecFOR complex, RecO component FTM_0720 787460 - 786813 - | DedA family protein FTM_0721 788142 - 787516 - | DedA family protein FTM_0722 788415 - 788149 - | BolA family protein FTM_0723 788966 - 788418 - | 5-formyltetrahydrofolate cycloligase FTM_0724 789292 - 789942 + | hypothetical protein ubiH 789951 - 791162 + | 2-octaprenyl-6-methoxyphenyl hydroxylase FTM_0726 791152 - 792387 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase FTM_0727 792409 - 792870 + | hypothetical protein queA 792896 - 793912 + | S-adenosylmethionine:tRNA ribosyltransferase- isomerase FTM_0729 794548 - 795339 + | haloacid dehalogenase-like hydrolase FTM_0730 796378 - 795593 - | hypothetical protein FTM_0733 798640 - 798828 + | hypothetical protein TERM 441 798836 - 798820 - f 70 -3.7 -5.09173 | opp_overlap 798820 GAAGAGGTGAAAAAA TATGGCT AAT ATCCATA TTGTAATTCCTGCCA kdsB 798821 - 799573 + | 3-deoxy-D-manno-octulosonate cytidylyltransferase FTM_0735 799566 - 799961 + | HIT family protein galK 801106 - 799958 - | galactokinase TERM 442 800373 - 800383 + g 71 -5.4 -4.50976 | overlap 800359 800358 800357 TTTTGTGAATCTAAT TCAC GAA GTGA TTTTATGCTGTGGAA galT 802134 - 801109 - | galactose-1-phosphate uridylyltransferase TERM 443 801983 - 801997 + g 84 -3.6 -5.59564 | TAGCATTTATCATCA TATTCT GGC AGAGTA TTTTTTTGAGTTTCT galP1 802225 - 803607 + | galactose-proton symporter, major facilitator superfamily TERM 444 804247 - 804222 - g 83 -6.9 -4.72272 | gap 1, overlap 804223 TCTTTTTACCAAAAA GCCC-TAGATGG TTG CTATCTAAGGGC AAAGATCAAGAAGCG TERM 445 804339 - 804329 - g 74 -3.2 -5.21709 | GCGGAGACTAAAAAA GTCC TTA AGAC TGATCATGGTTCTGT galP2 803639 - 805033 + | galactose-proton symporter, major facilitator superfamily TERM 446 805272 - 805307 + G 70 -7 -3.75169 | gap 1, opp_overlap 805279, overlap 805271 805275 GCTAGAGGCGGAGAT CT-AGGAACCTTTTCTC AAG GACAAATGGTTCCTGAG TTTGATAGAGTAGTA ppiC 805128 - 805406 + | parvulin-like peptidyl-prolyl isomerase domain TERM 447 806137 - 806126 - g 74 -2.2 -5.49568 | AAGCGAAAACAAAAA CTGC TAAT ACAG TGACACAAAAATTTA deaD 805471 - 807180 + | DEAD-box subfamily ATP-dependent helicase TERM 448 807166 - 807181 + F 74 -6.2 -4.43221 | opp_overlap 807166 807165 GGGAAGAAGTTAAAT CTTACT GCTC AGTAAG TTTTATAAAGTATTT gmk 807297 - 807869 + | guanylate kinase TERM 449 807919 - 807905 - g 80 -2.9 -5.64421 | overlap 807914 ATGTTAAACAAAAAA CTTAT AAAAG ATAAG ATATCACAAGCTAGA nadA 807890 - 808915 + | quinolinate synthetase complex, A subunit nadC 808924 - 809784 + | nicotinate-nucleotide pyrophosphorylase nadB 809787 - 811274 + | L-aspartate oxidase TERM 450 812460 - 812449 - f 72 -4.4 -5.09245 | TTAAAATCACAAAAA GGTA TACA TACC AATGATGAAGCCAAA TERM 451 812864 - 812852 - f 75 -4.9 -5.17353 | AGATTTACTAAAAAA TGTAT ATA ATACA AAAGTTATCGCTGAT TERM 452 813020 - 813048 + F 72 -8.4 -3.36054 | opp_overlap 813018, overlap 813018 TTTGATAGAGAATTT CTTTTCTAAAAT TAAGC ATTTTAGAAGAG TATTCTCTAGATTTG FTM_0748 813968 - 814258 + | hypothetical protein FTM_0749 814287 - 814757 + | glutathione peroxidase FTM_0752 817045 - 817692 + | hypothetical protein FTM_0753 817831 - 817703 - | hypothetical membrane protein TERM 453 818683 - 818667 - g 73 -4.5 -4.87786 | TCAAGTTTATAAAAA TCATATC CAA GATATAA ATCTAGCTAATATCC FTM_0754 817999 - 819492 + | carbohydrate kinase family protein FTM_0755 819895 - 819527 - | heat shock protein 15 TERM 454 821229 - 821253 + H 86 -10.1 -3.72695 | opp_overlap 821225 821222 AGTATTAACATTAGT TCCAACTGTAG GGG CTACACTTGGA TTTACTGGCCAGGGT TERM 455 823122 - 823150 + H 77 -9.7 -3.05022 | overlap 823123 ATGGAGTTTGAGGTG GCGCATGAATG TGTTGGT CATTCATGTGC TGTATATGTAGAGCC TERM 456 825312 - 825323 + H 70 -4.4 -4.97402 | TTAGTTTGCTGAGTA TCTG CTTG CAGA TTTTTATAGCTTTTC FTM_0758 825643 - 826458 + | hypothetical protein TERM 457 826609 - 826619 + T 74 -5.4 -4.87328 | ATATCTTTCTCTGAT GATG GAT CATC TTTTCTATTTCTATA FTM_0760 829097 - 828252 - | auxiliary transport protein, membrane fusion protein (MFP) family, putative FTM_0761 829302 - 829099 - | hypothetical protein FTM_0762 829499 - 830218 + | transcriptional regulator, IclR family FTM_0764 831428 - 831312 - | hypothetical protein FTM_0765 831467 - 832453 + | aminomutase cspA 832727 - 832524 - | cold shock protein, DNA-binding FTM_0767 833210 - 832926 - | hypothetical protein TERM 458 833341 - 833357 + H 70 -5.9 -4.27467 | overlap 833322 TATGTTATGTAATAT GTATCTT TAG AGGATAC TTTGTATTACTATTA TERM 459 833420 - 833390 - H 75 -4.9 -5.03227 | opp_overlap 833390 833397 AGAGTATAAATAAAA TAAAGCCTCTAAA TCTTC TTTAGATACTTTA TTGCTATTTTGCTAA TERM 460 833562 - 833530 - g 73 -3.6 -5.0538 | overlap 833553 GTTGACCTTAAAAAA CCTTTTGATATT AGTCTAAGA AATTTCAAAAGG GCTTGTGAAAAAGCA rpsU2 833500 - 833700 + | 30S ribosomal protein S21 TERM 461 833905 - 833893 - f 74 -2 -5.51046 | TAAACACATAAAAAA TACA AGGAA TGTA ATAATATTTGCTAAA TERM 462 834327 - 834310 - f 100 -7.7 -5.76633 | opp_overlap 834310 TTAGACATAAAAAAA GCCCACA TTGC TGTGAGC TTTAATTAATGGCGG FTM_0771 835219 - 836358 + | predicted Co/Zn/Cd cation transporter galU 836375 - 837238 + | UTP-glucose-1-phosphate uridylyltransferase FTM_0774 838711 - 839628 + | integral membrane protein DUF6 FTM_0775 839837 - 839631 - | lipoprotein, putative TERM 463 839904 - 839882 - R 74 -6.5 -4.39989 | opp_overlap 839876 839901, overlap 839873 839901 ATTAAATTATTAAAA TCTATTTTA ACAAA TAAAATAGA TAATAATTAGCTATC FTM_0776 840215 - 839922 - | hypothetical protein recF 841286 - 840237 - | RecFOR complex, RecF component TERM 464 840586 - 840603 + g 75 -8.5 -3.33761 | opp_overlap 840575, overlap 840585 TAATTAAAAGATTCT TCTAGCA CTTG TGCTAGA CTTTTATGTAAGTTC FTM_0778 842036 - 841290 - | Mg-dependent DNase TERM 465 843210 - 843220 + G 74 -2.4 -5.39721 | opp_overlap 843200 ATGAATGCTAGGCTA GCAG ATG CGGC TTTTTTCTATGATAC glyS 842229 - 844313 + | glycyl-tRNA synthetase, beta subunit rpiA 847860 - 847186 - | ribose 5-phosphate isomerase A FTM_0782 849232 - 847862 - | hypothetical membrane protein TERM 466 848614 - 848625 + g 74 -3 -5.243 | overlap 848596 AAGCAAACATTTGTC TTAG TTGA CTAA TTTTTTGGTAATTTA FTM_0783 849638 - 849246 - | lipoprotein, putative gidA 851533 - 849650 - | glucose inhibited division protein TERM 467 849734 - 849749 + g 75 -4.7 -4.84914 | GATACGTGATGCTTC GCCTA GAGTAG TAGGC TTTTGTTCTGTCAAT TERM 468 850026 - 850039 + g 70 -3.9 -4.87665 | CTTTCACGTGTCATT TTCTT ATCT AAGAA TTTTTCTAGATCACG TERM 469 850758 - 850770 + g 72 -4.9 -4.74917 | GCTGATTTATCAAGG TTATC AGT GATAA TTTTATGTGTTTCAT TERM 470 852660 - 852648 - g 72 -4.9 -4.71061 | AGCTATATCCAAAAA TATCA GCA TGATA AACAAAAAAGAAAGC FTM_0785 851676 - 852758 + | hypothetical membrane protein TERM 471 853451 - 853441 - g 80 -2.6 -5.71983 | CCAACTACAAAAAAA TATT ATG AATA CAAAAAGATAATTGT TERM 472 853613 - 853601 - g 76 -2.7 -5.49809 | GAAATTTTAAAAAAA TAACA ATT CGTTA TGATAAGATTCTTTA FTM_0786 852745 - 853650 + | hypothetical membrane protein FTM_0787 854560 - 853661 - | transcriptional regulator, LysR family FTM_0788 854676 - 855398 + | oxidoreductase, short-chain dehydrogenase family protein TERM 473 855647 - 855659 + G 80 -2.7 -5.63504 | opp_overlap 855647 855655 TGGATTTCAATGAGA TTGAG AGA TTCAA TTTTTTTGTAAAATT sbcB 855532 - 856980 + | exodeoxyribonuclease I TERM 474 857096 - 857078 - g 73 -8.9 -3.30007 | opp_overlap 857065 857075 857089, overlap 857065 AATACTGGGTTACAA CACCAAG TATTG CTTGGTG TGACAGGCTCTGGTA uvrB 856982 - 858988 + | excinuclease ABC, B subunit FTM_0791 859025 - 859822 + | hypothetical membrane protein murI 859822 - 860619 + | glutamate racemase TERM 475 860750 - 860764 + G 75 -8.6 -3.41989 | TTATATTACTTGCCG GGATTG GTG CAATCC TTGAGTTTTATGACT TERM 476 860942 - 860953 + G 81 -5.8 -5.00196 | TTGGTGACTTGATAG GACG TAGG CGTC TTTTGTTATTTACGA FTM_0793 860710 - 861987 + | metabolite:H+ symporter (MHS) family protein TERM 477 862099 - 862109 + F 81 -2.6 -5.76949 | ATGATTAAATAGTTG TTAT GCT ATAA TTTTTTTTGAAAATG TERM 478 862582 - 862561 - f 71 -6.6 -3.98214 | opp_overlap 862561 862576, overlap 862575 AGTACTTACCACAAA TGAGATGG ATAAAG CCACCTCA TGGTGTATATTGCCA TERM 479 863274 - 863252 - f 74 -7.1 -3.91716 | TTATGTGCTAAATAA CCTTGACAA ATTAG TTGTCAAAG AGGCAAATGGTTCAG FTM_0795 863660 - 864586 + | conserved TERM 480 868291 - 868281 - g 74 -5.4 -4.68593 | TTTATGAGGCAAAAA TGCA AGG TGCA GAATGTGCTGAAAGT xseA 867716 - 869101 + | exodeoxyribonuclease VII large subunit FTM_0799 869085 - 869285 + | hypothetical protein TERM 481 869698 - 869712 + T 72 -5 -4.70739 | GCTATCAGCAAATCG GTATAG TTT CTGTAC TTTTAATTATTTTTG TERM 482 869867 - 869879 + T 75 -4.1 -5.25699 | TGGAGTATTTTTGGG TACGG TAG CTGTA TTTTTGTTCTCTAGT FTM_0801 871529 - 870894 - | hypothetical membrane protein smpB 873019 - 872546 - | SsrA (tmRNA)-binding protein FTM_0804 873094 - 873525 + | oligoketide cyclase/lipid transport protein FTM_0805 873525 - 873830 + | hypothetical protein TERM 483 875007 - 874991 - g 70 -3.7 -4.9445 | overlap 874992 ATAACTAATCAAAAA CTACCAC ACT GTGATAA ATTATTAGCTGCTTT FTM_0806 873872 - 875077 + | hypothetical protein FTM_0807 875154 - 876074 + | VacJ like lipoprotein ggt 876129 - 877934 + | gamma-glutamyltranspeptidase FTM_0809 878705 - 877950 - | methyltransferase FTM_0810 880694 - 878877 - | GTP binding translational elongation factor Tu and G family protein TERM 484 880961 - 880989 + H 75 -4.6 -5.06505 | opp_overlap 880961 880966 AATTAATACTTATAA TGAGATGCTGAA ATAAA TTCAGCATGACA TTTTTATCTGTGGTT TERM 485 881283 - 881296 + H 71 -6.7 -3.91911 | TATTATCTTAGTCAT GGTAC TAGT GTACC TTTGGTTACAGTGGC TERM 486 885191 - 885202 + G 72 -5.8 -4.28762 | overlap 885177 ATCACAGGTATCTGT GGCT TTGT AGCC TTTTACTCAGGTTAT FTM_0813 885119 - 885283 + | hypothetical membrane protein FTM_0814 885959 - 886168 + | hypothetical protein TERM 487 886212 - 886192 - f 100 -11.2 -4.47485 | AAAAATGGTATAAAA GGGCAGAT ATAGA ATCTGCCC CTACAATAAACTATG TERM 488 886326 - 886300 - f 75 -6 -4.76193 | gap 1, overlap 886302 886311 AACCATAATATAAAA TAG-GGCTAAC ACATAG GTTAGCCCCTA CGATAAATTGAATTA TERM 489 886323 - 886302 - f 93 -10.2 -3.98053 | overlap 886300 886311 CCATAATATAAAATA GGGCTAAC ACATAG GTTAGCCC CTACGATAAATTGAA TERM 490 886377 - 886357 - f 74 -8.2 -3.58231 | overlap 886366 AAATAACGGATACAA GGGCAACC ACAAG GGATGCCC CTACGACAAATTATA TERM 491 886833 - 886809 - f 71 -7.3 -3.82665 | opp_overlap 886809 886808 886811 TATCACACTATTAAA TATTCATTATC AGA GGTAATGAATA ATTTGCATGGTGTAG TERM 492 886809 - 886833 + F 74 -9.5 -2.81768 | opp_overlap 886809, overlap 886808 886811 TATCACACTATTAAA TATTCATTATC AGA GGTAATGAATA ATTTGCATGGTGTAG TERM 493 886896 - 886869 - f 83 -7.8 -4.55673 | AAACATATTACAAAA GGGAAATTTGAA AACA TCCAAATCCCCC TCCCACCACTAGCAG TERM 494 887356 - 887374 + F 78 -4 -5.36965 | opp_overlap 887359, overlap 887350 887347 ATACTAGATTAAATA TGATATTT GTT AAATATTA TTTTTTATCATCTTC FTM_0817 888113 - 889561 + | type I restriction-modification system, M subunit FTM_0818 891296 - 889551 - | hypothetical protein TERM 495 890378 - 890396 + g 70 -2.4 -5.2166 | overlap 890379 890388 890393 GTCCAACTTCTTTCT TTTGTTCA ATT TGATCAAG TTTTTTAGCTTGTTC FTM_0819 892235 - 891363 - | GTP-binding protein nagA 892298 - 893431 + | N-acetylglucosamine-6-phosphate deacetylase FTM_0821 893435 - 894073 + | glycoprotease family protein FTM_0822 894077 - 894883 + | glutamine amidotransferase class-II family protein FTM_0823 894893 - 896086 + | aspartate aminotransferase era 896200 - 897093 + | GTP-binding protein Era FTM_0825 897108 - 897524 + | hypothetical membrane protein adk 901517 - 900861 - | adenylate kinase TERM 496 902194 - 902208 + G 86 -5 -5.60993 | AATTAGCTATTAGTA GTTTTG TTT CAGAAC TTTTTTTATCAGAGA pilM 901644 - 902648 + | type IV pili, pilus assembly protein pilN 902650 - 903213 + | type IV pili associated protein pilO 903207 - 903803 + | type IV pili glycosylation protein pilP 903809 - 904399 + | Type IV pili periplasmic component TERM 497 905786 - 905814 + G 90 -11.7 -3.53091 | opp_overlap 905782 905786 GTACCATATAACCAA GCAACAGCTTCTG GTG CCGCAGCTGTTGC TTTCCAAGAGGCGGT TERM 498 905814 - 905786 - g 89 -11.7 -3.51076 | opp_overlap 905786, overlap 905782 GTACCATATAACCAA GCAACAGCTTCTG GTG CCGCAGCTGTTGC TTTCCAAGAGGCGGT pilQ 904412 - 906184 + | type IV pili secretin component aroK 906309 - 906839 + | shikimate kinase aroB 906836 - 907915 + | 3-dehydroquinate synthase FTM_0835 907973 - 908197 + | hypothetical protein FTM_0836 908647 - 908264 - | hypothetical protein FTM_0837 908860 - 909147 + | hypothetical protein TERM 499 909138 - 909124 - f 83 -2.2 -5.95449 | AAAGAAAAGAAAAAA TTTAAT CAA ACTAAA TTAAAGTAGCTAAAA TERM 500 909653 - 909642 - g 74 -2.2 -5.40474 | ATTTTCTTAAAAAAA CTAG TGAG CCAG TAATTCGTCAAGCAA TERM 501 910967 - 910950 - g 71 -6.3 -4.19276 | opp_overlap 910963, overlap 910942 910963 CTAAAATTGCTAAAA GAGCACT AAAA AATGCTC AAAGTGCATTTGAAG TERM 502 910975 - 910963 - g 74 -3.3 -5.2112 | opp_overlap 910963, overlap 910950 AAGAGCACTAAAAAA TGCTC AAA GTGCA TTTGAAGAGTGGAGT TERM 503 911887 - 911853 - g 86 -2.9 -5.80817 | TTGAAGAGAAAAAAA GCCAGTTTAAGCTTA TATAT CAAGCTCAACCTAAC CAAGATACACAAAAG putA 909164 - 913228 + | bifunctional proline dehydrogenase, pyrroline-5-carboxylate dehydrogenase TERM 504 913778 - 913788 + G 71 -6.8 -4.2243 | opp_overlap 913778 GGTGTTCTGACTACA GCTG GAA CAGC TTTTGCACTATTTGT FTM_0839 913388 - 914896 + | amino acid-polyamine-organocation (APC) superfamily FTM_0840 914972 - 916156 + | major facilitator superfamily (MFS) transport protein dfp 916169 - 917344 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate cysteine ligase FTM_0843 918651 - 918397 - | hypothetical protein FTM_0845 919938 - 919693 - | hypothetical protein TERM 505 922351 - 922331 - H 75 -5.5 -4.74767 | opp_overlap 922346 ATAATCAAGATAAAA TCAAAAAAG TAT CTTTATTGA AAATATATTTGAATT TERM 506 922394 - 922380 - H 86 -7.2 -5.30155 | TTATTAATCAAAAAA TACTCT ATG AGAGTA CAATCAATAGCATAA FTM_0850 923786 - 924592 + | ROK family protein bioD 926275 - 925598 - | dethiobiotin synthase bioC 927016 - 926279 - | biotin synthesis protein BioC bioF 928121 - 926994 - | 8-amino-7-oxononanoate synthase TERM 507 927180 - 927192 + g 71 -6.3 -4.09321 | opp_overlap 927179 ATCTTTTAATCTAAT TGCTA GAT TAGCA TTATTTAGTTGAATA bioB 929056 - 928115 - | biotin synthase bioA 929103 - 930434 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 508 933377 - 933363 - T 79 -7.2 -4.3851 | GAGATTAAACAGAAA GTAGAT GAT ATCTAC AAAGCTATGAACATG TERM 509 935170 - 935192 + T 88 -8 -4.98103 | opp_overlap 935169 935174, overlap 935156 TTTTAAGTAAATATT TAAATTAATA TTT TATTAATTTA TTTTATATTTTATTA TERM 510 935347 - 935333 - T 75 -4.4 -5.24989 | CTAGAGATTAAAAAA TAAATT AAC AATTTA TGAGATTTAAGATTT glyA 936614 - 935361 - | serine hydroxymethyltransferase FTM_0861 936718 - 937266 + | hypothetical protein FTM_0862 938552 - 937281 - | hypothetical membrane protein TERM 511 938521 - 938511 - G 86 -2.6 -5.94743 | TAAAAAAAACAAAAA TATT AAT AATA TGAAGATTGTTCTGC FTM_0863 938760 - 940091 + | hypothetical membrane protein TERM 512 940113 - 940134 + T 76 -5.3 -5.16969 | ACTAAGCTAGATCGA TTATTTAGT ACTT ACTAAGTAA TTTCTTTTTTATATC FTM_0864 941007 - 940117 - | glycosyl transferase family 8 protein FTM_0865 942103 - 941015 - | hypothetical protein TERM 513 942866 - 942852 - g 74 -2.1 -5.47399 | GTAACTCTAAAAAAA TATCC TGATT GGACA GCAGTAGTTATTGGT lpcC 942273 - 943337 + | glycosyl transferase group 1 family protein FTM_0867 944435 - 943338 - | choloylglycine hydrolase family protein FTM_0868 944682 - 946073 + | proton-dependent oligopeptide transporter disrupted by IS element FTM_0869 946895 - 947407 + | hypothetical protein FTM_0870 948194 - 947565 - | hypothetical protein FTM_0871 948838 - 949344 + | hypothetical protein TERM 514 950132 - 950114 - f 83 -9 -4.15222 | opp_overlap 950113 ATTGTCTGGAATAAA CTTTTTGA TTT TCAAAAAG ATGGTGTACTTGGAG TERM 515 952702 - 952689 - g 76 -3.9 -5.21709 | GCGTATACCAAAAAA TAGTT TTGA AACTA ACACAAAGCTAACTT TERM 516 953173 - 953193 + G 83 -11.2 -2.8937 | opp_overlap 953166 AAAAACGATTTGTCA TTCCGTGG CTTGA CCACGGAA TCTATAAAAGTATAT FTM_0873 952618 - 953418 + | hypothetical protein TERM 517 954212 - 954192 - f 70 -5.3 -4.58419 | opp_overlap 954191 954194, overlap 954193 954194 ATAAAATATAATAAA TTCCCCTTC TGT GAAGGGGTG GTGTAATTCTCCTCC TERM 518 954211 - 954193 - f 74 -8.8 -3.32611 | opp_overlap 954191 954194, overlap 954192 954194 TAAAATATAATAAAT TCCCCTTC TGT GAAGGGGT GGTGTAATTCTCCTC TERM 519 954194 - 954210 + F 100 -12.3 -2.72031 | opp_overlap 954194 954193 954192, overlap 954191 AAAATATAATAAATT CCCCTTC TGT GAAGGGG TGGTGTAATTCTCCT TERM 520 954210 - 954194 - f 100 -12.3 -2.5794 | opp_overlap 954191 954194, overlap 954193 954192 AAAATATAATAAATT CCCCTTC TGT GAAGGGG TGGTGTAATTCTCCT TERM 521 954221 - 954237 + F 100 -12.3 -2.52464 | AGGGGTGGTGTAATT CTCCTCC TAT GGAGGAG TACCTTGCAAGGCAA TERM 522 954318 - 954289 - g 73 -4.4 -4.93316 | gap 1, overlap 954290 TAATAATATTAAAAA GTGGATACCGCTA TCAAG TAGCGGTATG-AC AGTAAGAGTGAGTAG TERM 523 956115 - 956099 - g 74 -2.2 -5.42514 | TCAGAAATGAAAAAA CGCC AAGAGATAG GGCG AGGGCTTAGACTTTG FTM_0875 954242 - 956899 + | type III restriction system endonuclease FTM_0876 956918 - 957448 + | type III restriction enzyme, res subunit FTM_0877 957547 - 957888 + | hypothetical protein TERM 524 957994 - 957972 - f 86 -9.4 -3.90291 | opp_overlap 957971 957974 957977, overlap 957977 ATGCTCGCAAGTAAA TATAATACTT TAT AAGTATTATA GTTAATCCGAAAGAT TERM 525 959001 - 958982 - f 89 -8.6 -4.54449 | opp_overlap 958985 AGAGGCGAGAGAAAA GAAGAGCA ATTC CGCTCTTC TTCAAACCTAAAGGA FTM_0878 959208 - 960071 + | hypothetical protein TERM 526 960650 - 960621 - f 100 -10.9 -4.14511 | AACGCTATTGTAAAA GATTTATATAGCC TCAG GGCTATCTAAATC AACTAGCGTTTCAGA FTM_0880 961036 - 961590 + | fatty acid hydroxylase TERM 527 962268 - 962247 - g 74 -2.3 -5.52909 | overlap 962249 GAAGAGCTAAAAAAA CATCAACCA ATAT TGATTGATC CAATGTGTGGTTCTG FTM_0881 961665 - 963818 + | hypothetical protein FTM_0882 963920 - 964318 + | hypothetical membrane protein fmt 964323 - 965264 + | methionyl-tRNA formyltransferase gshB 965268 - 966242 + | glutathione synthase hemL 966232 - 967527 + | glutamate-1-semialdehyde-2,1-aminomutase FTM_0886 969215 - 967548 - | glycosyl hydrolase family 3 TERM 528 968388 - 968422 + g 71 -8.8 -3.08786 | opp_overlap 968387, overlap 968387 968396 968399 CATGGCATCAGATAC TACTAAACCATCAAAT TTC ATTTGTTGTTTTAGTA ATTTAGTTATTATTT hemF 972387 - 971461 - | coproporphyrinogen III oxidase, aerobic TERM 529 973375 - 973360 - g 73 -7.6 -3.77639 | overlap 973370 GAAGCTATAACAGAA CCATCA GTAA TGATGG AATCAAATGAGAAAG rpsF 973066 - 973401 + | 30S ribosomal protein S6 rpsR 973417 - 973635 + | 30S ribosomal protein S18 rplI 973654 - 974109 + | 50S ribosomal protein L9 TERM 530 974183 - 974147 - f 100 -14.1 -4.1822 | opp_overlap 974147 974157, overlap 974133 974132 974157 CTGTATTCTAATAAA TACAAAAAAACCATG TGTTAGG CATGGTTTTTTTGTA TTTAAAGCAAGGGTT TERM 531 974147 - 974183 + F 100 -14.8 -3.53343 | opp_overlap 974133 974132 974147 974157, overlap 974157 CTGTATTCTAATAAA TACAAAAAAACCATGT GTTAG GCATGGTTTTTTTGTA TTTAAAGCAAGGGTT TERM 532 974157 - 974173 + F 89 -4.4 -5.88197 | opp_overlap 974147 974157, overlap 974147 ATAAATACAAAAAAA CCATGT GTTAG GCATGG TTTTTTTGTATTTAA TERM 533 974173 - 974157 - f 87 -3.7 -5.90231 | opp_overlap 974157 974147, overlap 974147 ATAAATACAAAAAAA CCATG TGTTAGG CATGG TTTTTTTGTATTTAA dnaB 974199 - 975596 + | replicative DNA helicase FTM_0895 975627 - 976739 + | radical SAM enzyme domain, Cfr family pilF 976729 - 977634 + | Type IV pili, pilus assembly protein rsuA 977627 - 978442 + | 16S rRNA pseudouridine synthase FTM_0898 978442 - 978867 + | hypothetical protein rimI 978845 - 979285 + | ribosomal-protein-alanine acetyltransferase TERM 534 979685 - 979699 + F 70 -6.4 -4.08216 | opp_overlap 979685 GAGCTGTAGGTAAAA CACCAG TAT TTGGTG TTTTAAACGAAATCA TERM 535 979815 - 979799 - f 70 -5.9 -4.23434 | TAAAATACTCGAAAA CAGTACA ATC TATACTG ATGGCTGGAAAGCGT FTM_0900 981726 - 981890 + | hypothetical protein TERM 536 983956 - 983973 + F 79 -8.5 -4.03085 | opp_overlap 983955 TGGTGATAATATACG TCATGGT CTTA ACCATGA TTTGGGTTTTTATGA TERM 537 984126 - 984114 - f 72 -4.9 -4.94222 | opp_overlap 984114, overlap 984105 AACAAGCGAGAAAAA TTATC GGT GATAA TTTCATAGAGATATT TERM 538 986424 - 986396 - f 70 -6.2 -4.14193 | opp_overlap 986355 986396 986395 AGAATATCACACAAA CTCTTATTATTT GATTA AAATAATAGGAG ATTAATAATGGAAAA TERM 539 986476 - 986486 + G 76 -2.6 -5.40072 | opp_overlap 986476 TATATCTTTAATAAT TTAT TTT ATAA TTTTTTTACCACAAA FTM_0904 986432 - 987055 + | hypothetical membrane protein FTM_0905 987136 - 987567 + | hypothetical protein TERM 540 988080 - 988060 - g 73 -7.7 -3.74224 | TGCAAATTATGCAAA TATTAGCTG ATG CAACTAATA AAATCTCAGAAGGAG ispB 987657 - 988634 + | octaprenyl-diphosphate synthase TERM 541 988635 - 988647 + T 81 -3.5 -5.64421 | opp_overlap 988635, overlap 988641 AATAGGAAGAATTAA TTTTT ATA AAAAA TTTTTTATTTAAAAT FTM_0907 989464 - 988652 - | fkbp-type peptidyl-prolyl cis-trans isomerase family protein FTM_0908 990281 - 989478 - | predicted ATPase of the PP-loop superfamily TERM 542 990090 - 990101 + g 83 -2.2 -5.78622 | TGCGATGATTTCAAA GCTT ATTG GAGC TTTTTTTTGGAGTAA FTM_0909 990690 - 990274 - | thioesterase TERM 543 990353 - 990363 + g 74 -6.8 -4.37502 | opp_overlap 990353 990352 TTAGCATTATAACAG GCCA ATT TGGC TTTTGCTCTAGTGAT FTM_0910 991317 - 990706 - | hypothetical protein TERM 544 991211 - 991235 + g 80 -9.5 -3.67877 | opp_overlap 991215 991218, overlap 991215 CAATCAGGAAATTGA TGAATAATGCT ACA AGCATTATTTA TATTTGTTGGAGGCT TERM 545 991215 - 991231 + g 84 -8.1 -4.46072 | opp_overlap 991215 991218, overlap 991211 CAGGAAATTGATGAA TAATGCT ACA AGCATTA TTTATATTTGTTGGA TERM 546 991231 - 991215 - G 70 -8.1 -3.25802 | opp_overlap 991211 991215, overlap 991218 CAGGAAATTGATGAA TAATGCT ACA AGCATTA TTTATATTTGTTGGA FTM_0911 992721 - 991318 - | serine-type D-Ala-D-Ala carboxypeptidase TERM 547 992918 - 992929 + H 70 -5.8 -4.3467 | GAAATATTGGTAGAG GGAC ATTA GTCC TTTTAATGTAAACGT rpsU3 992977 - 993165 + | 30S ribosomal protein S21 FTM_0913 993240 - 993686 + | GatB/YqeY domain protein dnaG 993707 - 995524 + | DNA primase TERM 548 996130 - 996120 - g 73 -4 -5.19212 | ATCATGAGGAAAAAA TTGA TAC TCAA AGGGCTTATGAATTC rpoD 995549 - 997282 + | RNA polymerase sigma 70 factor RpoD TERM 549 1000373 - 1000359 - T 80 -10 -3.23216 | TTTTATCACGACCAA CACCTG GTT CAGGTG TCCAAAGTGGGAAAT lipB 1003366 - 1002746 - | lipoate-protein ligase B TERM 550 1002798 - 1002776 - G 73 -7 -4.03204 | opp_overlap 1002775 1002776, overlap 1002777 TAGCAAAGTTACAAA CTCAGCAGTA TAT TGCTGCTGAA CTTTCTTAATATCAG FTM_0920 1003660 - 1003376 - | hypothetical protein FTM_0921 1005027 - 1003693 - | D-alanyl-D-alanine carboxypeptidase TERM 551 1004519 - 1004553 + g 73 -8.1 -3.59946 | gap 1, opp_overlap 1004519, overlap 1004517 1004513 TTATTCATGCCAATA GCCTTTGCTG-TTTGA TTCA TTAAATCAGTAAAGGC TTGTGTAGTTCCGCC ppa 1005184 - 1005705 + | inorganic pyrophosphatase TERM 552 1006039 - 1006020 - g 70 -4.4 -4.72846 | gap 1, opp_overlap 1006020, overlap 1006024 TGATAGATTTAAAAA CTT-AGGAT TAG ATCCTGAAG ATATTTTGCAAGGTC TERM 553 1006076 - 1006062 - g 79 -3.6 -5.47399 | GCAAGGTCAAAAAAA TAAACT AAA AGCTTA TGAATTTCTCAAGTC yrbI 1005796 - 1006344 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase FTM_0924 1006352 - 1006978 + | hypothetical protein FTM_0925 1006965 - 1007795 + | hypothetical protein FTM_0926 1007869 - 1008600 + | ABC transporter, ATP-binding protein TERM 554 1008673 - 1008656 - g 73 -7.1 -4.06778 | AGCAAAAAATGCAAA TTGATCT AACA AGATCAA AAGTAATTTGTGTCG FTM_0927 1008649 - 1009242 + | isomerase TERM 555 1010604 - 1010590 - g 75 -7.2 -4.21351 | opp_overlap 1010581 1010580, overlap 1010581 AAACATTCCAAGAAA TTTGGA GTT TCCAAA AAGAAATTTACACTG TERM 556 1010985 - 1010999 + G 73 -7.2 -3.98716 | TGTTGAGGTGCAGCA CTATCA TTT TGATAG TTTGGTTCATGGTTT FTM_0928 1009255 - 1011087 + | protein of unknown function with predicted hydrolase and phosphorylase activity TERM 557 1011530 - 1011544 + G 70 -4.3 -4.67123 | AGCTTGTGAATATCT TCTTG GCGAA CAAGA TTTTAGTTCTTTTAG truA 1011090 - 1011866 + | tRNA pseudouridine synthase A TERM 558 1012394 - 1012383 - g 73 -4.4 -4.85782 | opp_overlap 1012383 TGTTGCAAAAATAAA CTCA ATTG TGAG TATTTGGAAGATATT TERM 559 1013251 - 1013263 + G 71 -6.3 -4.12397 | GCTAGCGTCTTTAAG CAAAC ATG GTTTG TTTGTGCTTATATCA FTM_0930 1011922 - 1013466 + | amino acid permease guaA 1013554 - 1015104 + | GMP synthase (glutamine-hydrolyzing) TERM 560 1016673 - 1016663 - g 70 -4 -5.00138 | TAGGTAAAGCAAAAA TTGT TAA ACAA GGTTCAAAAATTGCA dxs 1015186 - 1017033 + | 1-deoxyxylulose-5-phosphate synthase FTM_0933 1017049 - 1017384 + | hypothetical protein FTM_0934 1017603 - 1018034 + | lipolytic enzyme, GDSL family FTM_0935 1018634 - 1018044 - | CBS domain pair protein TERM 561 1018681 - 1018695 + H 81 -7.2 -4.60255 | CATAATTAGATTTTA GACAAA ATA TTTGTC TTTTTCAAAGCTTAT FTM_0936 1018752 - 1019477 + | short chain dehydrogenase family protein ruvB 1019541 - 1020587 + | holliday junction DNA helicase RuvB FTM_0938 1021216 - 1020629 - | peptidoglycan hydrolase FTM_0939 1021750 - 1021562 - | hypothetical protein FTM_0940 1022065 - 1021862 - | hypothetical protein FTM_0941 1022616 - 1022080 - | hypothetical membrane protein FTM_0942 1022776 - 1023693 + | hypothetical protein TERM 562 1025038 - 1025062 + F 85 -4.5 -5.64304 | opp_overlap 1025042, overlap 1025039 TAATTTGGTTGTTAG ATTATTAAAAA TAA TTTTTAATAAG TTTTTTGTTATATTA TERM 563 1025039 - 1025061 + F 76 -8 -3.96142 | opp_overlap 1025042, overlap 1025038 AATTTGGTTGTTAGA TTATTAAAAA TAA TTTTTAATAA GTTTTTTGTTATATT FTM_0944 1025130 - 1026605 + | proton-dependent oligopeptide transporter (POT) family protein, di- or tripeptide:H+ symporter FTM_0945 1026630 - 1027523 + | drug/metabolite transporter superfamily protein pheS 1027609 - 1028622 + | phenylalanyl-tRNA synthetase, alpha subunit TERM 564 1029772 - 1029759 - g 79 -5.3 -5.12617 | opp_overlap 1029757 1029759, overlap 1029748 CAATTAGCTAAAAAA GCTAT GAAA ATAGC TATTAGATTAATAAA pheT 1028643 - 1031015 + | phenylalanyl-tRNA synthetase, beta subunit FTM_0948 1031489 - 1031058 - | Fe2+/Zn2+ uptake regulator protein FTM_0949 1031631 - 1032848 + | hypothetical protein FTM_0950 1032851 - 1033597 + | zinc (Zn2+)-iron (Fe2+) permease (ZIP) family protein FTM_0951 1034608 - 1033619 - | lipoprotein, putative cls 1036207 - 1034777 - | cardiolipin synthetase TERM 565 1035605 - 1035593 - G 72 -2.7 -5.252 | CACCGGCATAAAAAA TACTA CTT TAGCA CCTAAATCACGTAAT TERM 566 1038954 - 1038940 - H 74 -7.2 -3.99819 | overlap 1038931 AACAAACATACCAAA TATGAC AAA GTCATA AAATTCTAACATTCC FTM_0955 1039091 - 1039951 + | Mrp-like protein dcd 1039963 - 1040529 + | deoxycytidine triphosphate deaminase FTM_0957 1041726 - 1040536 - | small conductance mechanosensitive ion channel (MscS) family protein FTM_0958 1042361 - 1041786 - | rare lipoprotein B family protein leuS 1044810 - 1042369 - | leucyl-tRNA synthetase TERM 567 1042877 - 1042899 + g 76 -6.5 -4.56702 | TTCTGAGACTCTAGC GTTATATTT TTGGC AAATATAAC TTTATTTAGTTCGGC TERM 568 1043937 - 1043951 + g 76 -2.8 -5.46629 | GAGTAGCAAGATCAG CTTCCA TGG TTGAAG TTTTTTTACACTCTT FTM_0960 1046813 - 1044918 - | hypothetical protein FTM_0962 1048012 - 1047602 - | hypothetical protein FTM_0963 1048598 - 1048014 - | hypothetical protein FTM_0965 1049605 - 1049234 - | hypothetical protein TERM 569 1049797 - 1049769 - R 72 -2.6 -5.37043 | gap 1 ACTTTATATAAAAAA TACTCACAA-AGA TGAA TCTCTTGTTAGTA TATGCCGCTCATAAA FTM_0967 1051788 - 1050622 - | hypothetical protein TERM 570 1050893 - 1050903 + g 77 -5.4 -5.01422 | TTTATCAAAATTTTT TCTC TGA GAGA TTTATTTTTATATAG TERM 571 1051315 - 1051337 + g 82 -5.7 -5.30575 | TATTCCAATTACATT TTCTTGTTT ATCTA AAACAGGAA TTTTTTCAGTTTTTA TERM 572 1051373 - 1051399 + g 95 -3.8 -6.25741 | opp_overlap 1051378 AAGAAATTCTTATCA TCAGATATCAAA TAC TTAGATATATGA TTTTTTTTATTATTT TERM 573 1051549 - 1051561 + g 77 -4.9 -5.14477 | opp_overlap 1051549 1051547 1051556 ACTCAAAAATACATA TTTAG AAT CTAAA TTTTTTAAATATATG FTM_0968 1053362 - 1052133 - | hypothetical protein FTM_0969 1053584 - 1054963 + | amino acid transporter (AAT) family protein FTM_0970 1055005 - 1055610 + | hypothetical membrane protein TERM 574 1055674 - 1055643 - g 78 -10.4 -2.63901 | overlap 1055642 1055645 1055648 ACTCCATCAACCAAT CAGAACAAAGATAA TTAC CTATCTTTATTCTG TAGATAGTGCTACAT FTM_0971 1055614 - 1055907 + | transcriptional regulator, MarR family TERM 575 1056134 - 1056165 + T 76 -7.6 -3.97406 | opp_overlap 1056143, overlap 1056132 1056143 TAATTAAATGATGTT TTAAGAGAATATTT CTAA AAATATTTTCTTGA TTTGTCAGCTTTTGA trxA2 1056630 - 1056304 - | thioredoxin FTM_0973 1057323 - 1056634 - | lipoprotein, putative TERM 576 1058036 - 1058048 + r 71 -4.9 -4.7254 | ACATTCTCACCTTGT TCAAT TAA ATTGA TTTTTACTCCAAGCT TERM 577 1058168 - 1058156 - R 74 -6.2 -4.48263 | TATACAACATCAAAA GCCG TTGGT CGGC ACATCAAAACTTCTT sufD 1059424 - 1058279 - | SufS activator complex, sufD subunit TERM 578 1058825 - 1058790 - G 74 -5.8 -4.57209 | gap 1, overlap 1058793 1058794 AGATTAACTACAAAA TCAT-TTCTTAATAAAG CAT CTTTATTAAGAAGATTA AAACCGTTAAACTCA TERM 579 1058821 - 1058793 - G 77 -9.1 -3.22215 | overlap 1058790 1058794 TTAACTACAAAATCA TTTCTTAATAAAG CAT CTTTATTAAGAAG ATTAAAACCGTTAAA TERM 580 1058820 - 1058794 - G 86 -12.6 -2.52606 | overlap 1058793 1058790 TAACTACAAAATCAT TTCTTAATAAAG CAT CTTTATTAAGAA GATTAAAACCGTTAA sufC 1060186 - 1059437 - | sufS activator complex, sufC subunit TERM 581 1059838 - 1059822 - G 83 -8.1 -4.37092 | opp_overlap 1059821 AGTTTTTTCATAAAA GAAATTG CAT CAATTTC ATCTTCACCATTTTG sufB 1061671 - 1060229 - | sufS activator complex, sufB subunit TERM 582 1060846 - 1060856 + g 76 -6.8 -4.50976 | TGCCATCTTTATCAC CTGG GTA CCAG TTTTGTACTGTCGAG TERM 583 1061379 - 1061399 + g 74 -5.5 -4.68424 | ATCTCTGGATCAACT TCATCTAAG CTT TTTGGATGA TTTTTAAGTGACTTG FTM_0978 1062088 - 1061678 - | FeS assembly SUF system regulator TERM 584 1063216 - 1063205 - g 74 -2.2 -5.40072 | TTGGTGCTAAAAAAA CAGT CGCT ACCG TTAATAGTTCTGAAT trkA 1062241 - 1063614 + | trk system potassium uptake protein TrkA FTM_0980 1063673 - 1065094 + | amino acid antiporter infA 1066274 - 1066056 - | translation initiation factor IF-1 FTM_0983 1066434 - 1067273 + | hypothetical protein FTM_0984 1067270 - 1067536 + | hypothetical protein TERM 585 1067834 - 1067816 - g 79 -3.8 -5.57054 | AAGAAGTCAAAAAAA GTCTTACC CCA GATCAGAC TTTTATTTCTTTTGT TERM 586 1067922 - 1067906 - g 70 -3.6 -4.86939 | opp_overlap 1067908, overlap 1067908 CAATAAACCTAAAAA CTCAGC CACCT GCTGTG ATATTAATGGCTGGT ffh 1067617 - 1068993 + | signal recognition particle GTPase TERM 587 1069052 - 1069042 - g 70 -4 -4.8667 | opp_overlap 1069042 GATAGGTGATAAAAA CTTT GAT AAAG TTTCTAATATAAATA aroG 1069025 - 1070137 + | phospho-2-dehydro-3-deoxyheptonate aldolase xthA 1072848 - 1073636 + | exodeoxyribonuclease III FTM_0991 1073657 - 1074364 + | short chain dehydrogenase TERM 588 1074442 - 1074413 - g 75 -7.3 -4.21908 | opp_overlap 1074416, overlap 1074416 CAGGAGTAGGCAAAA CAACTTTAGCTAA ACAA TTAGCTCAAGTTA TACCTAATACGGCAT TERM 589 1074439 - 1074416 - g 71 -6.8 -4.22883 | opp_overlap 1074416, overlap 1074413 GAGTAGGCAAAACAA CTTTAGCTAA ACAA TTAGCTCAAG TTATACCTAATACGG FTM_0992 1074367 - 1074870 + | putative kinase FTM_0993 1074870 - 1075589 + | hypothetical membrane protein gor 1075627 - 1076988 + | glutathione reductase FTM_0995 1076999 - 1077319 + | hypothetical protein FTM_0996 1077457 - 1078998 + | proton-dependent oligopeptide transporter (POT) family protein, di- or tripeptide:H+ symporter FTM_0997 1080320 - 1078995 - | ATP-dependent RNA helicase TERM 590 1079780 - 1079809 + g 83 -2.3 -5.82316 | overlap 1079784 1079787 CTGAGAACATTAGTG TTTGTAACTTTTT CGGT AAAAGGTTATGGA TTTTTTTTAAATCAT TERM 591 1080793 - 1080813 + G 75 -4.7 -4.90302 | AGCACCATTTTGTAC CTTTTGAAG GTA CTGCAGAAG TTTCTTTTATTCCTA folE 1080447 - 1081067 + | GTP cyclohydrolase I FTM_1000 1081914 - 1082339 + | hypothetical protein TERM 592 1083258 - 1083232 - g 78 -7.4 -4.15565 | overlap 1083233 TGTAGTAGTTGAAAA TCTTGATATAAC AAA GTTACATCAAGC CCATAAAAACTATGA TERM 593 1083257 - 1083233 - g 83 -10.9 -3.09018 | overlap 1083232 GTAGTAGTTGAAAAT CTTGATATAAC AAA GTTACATCAAG CCCATAAAAACTATG FTM_1001 1082417 - 1083337 + | carbon-nitrogen hydrolase family protein pabA 1086269 - 1085715 - | para-aminobenzoate synthase component FTM_1005 1088034 - 1086271 - | para-aminobenzoate synthase component I FTM_1006 1089397 - 1088027 - | AMP-binding enzyme TERM 594 1088365 - 1088349 - G 75 -5.1 -4.9218 | TAGCGACCATAAAAA CTAAGCT CAT AGCTTTG GTGATCAAAACTACC TERM 595 1089325 - 1089341 + g 70 -8.1 -3.17725 | overlap 1089323 1089322 CATAGTCATATCTTT TATCTTC AAA GAAGATA TAGTTATTTTTGCCA folB 1089479 - 1089832 + | dihydroneopterin aldolase TERM 596 1090100 - 1090087 - g 77 -5.3 -4.9755 | ACATAGAATTAAAAA TAGGT AGAG ACCTA AATGCTCCTGCATGG TERM 597 1090827 - 1090817 - g 77 -3.2 -5.53991 | TATTGAGCAAAAAAA GCAA ATT CTGC TAAAACATGGTATAG FTM_1008 1089834 - 1091096 + | 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase/dihydropteroate synthase FTM_1009 1091109 - 1092029 + | lipase/esterase FTM_1010 1092045 - 1092545 + | hypothetical protein FTM_1012 1094884 - 1093889 - | hypothetical protein TERM 598 1094870 - 1094894 + g 81 -6 -4.99638 | CCATATGTAGTGTAC TTTATTTAAA TACAT TTTAAATAAA TTTTTATATAAATAT TERM 599 1095116 - 1095105 - R 72 -4.4 -5.09245 | TTAAAATCACAAAAA GGTA TACA TACC AATGATGAAGCCAAA TERM 600 1095520 - 1095508 - R 75 -4.9 -5.17353 | AGATTTACTAAAAAA TGTAT ATA ATACA AAAGTTATCGCTGAT TERM 601 1095676 - 1095704 + r 72 -8.4 -3.36054 | opp_overlap 1095674, overlap 1095674 TTTGATAGAGAATTT CTTTTCTAAAAT TAAGC ATTTTAGAAGAG TATTCTCTAGATTTG FTM_1014 1097520 - 1096816 - | hypothetical protein TERM 602 1097564 - 1097580 + r 72 -5.1 -4.82901 | opp_overlap 1097564, overlap 1097578 ATTTAGATAATATAA GCTAAAG CAG CTTTTGC TTTTTCTACAACAGC rplT 1097916 - 1097551 - | 50S ribosomal protein L20 rpmI 1098149 - 1097952 - | 50S ribosomal protein L35 infC 1098704 - 1098192 - | translation initiation factor IF-3 thrS 1100639 - 1098735 - | threonyl-tRNA synthetase TERM 603 1100871 - 1100889 + r 76 -6.2 -4.55826 | opp_overlap 1100871 1100874 TTCCCCTAAGAACAA TAATATTA GTT TAATATTA TTTTAGTGTTTTGCG TERM 604 1101234 - 1101218 - R 76 -8.7 -3.54307 | AAGACTGTGGCGAAA GAGCTCA ATA TGAGCCC CAATCAATAGAACAA TERM 605 1102829 - 1102813 - R 81 -8.1 -4.25754 | opp_overlap 1102816 CTAAAAATAATCAAA CAAGTAT AAC ATACTTG GTTAGCGGAGATTTA FTM_1020 1103251 - 1102955 - | hypothetical protein gcvH1 1103621 - 1103241 - | glycine cleavage system H protein TERM 606 1104410 - 1104397 - g 77 -5.3 -4.84918 | GGTATAAATATAAAA GTTTG GCAC CAAAC AGGTAAACTATCACT TERM 607 1104570 - 1104591 + G 85 -9.5 -4.02132 | TGTATCAGAGTGTGC TATTGCTGG ATTG CCAGCGATA TTTATCCCTTTACCA murG 1103725 - 1104840 + | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 608 1104925 - 1104913 - g 83 -4.8 -5.46129 | GAACAAATGAAAAAA GCTC AGCAA GAGC GTGAAAATATGGAAG FTM_1023 1104850 - 1105188 + | hypothetical protein recR 1105188 - 1105790 + | RecFOR complex, RecR component spoT 1107912 - 1105798 - | GDP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase TERM 609 1107259 - 1107279 + g 86 -5.5 -5.63012 | overlap 1107260 CTTTTCTGCTAATGC TTCTTTTAC CTC GTAAAAGAC TTTTTCTTTATTTTT TERM 610 1107260 - 1107278 + g 82 -9 -3.92317 | overlap 1107259 TTTTCTGCTAATGCT TCTTTTAC CTC GTAAAAGA CTTTTTCTTTATTTT TERM 611 1107438 - 1107422 - G 70 -8.1 -3.25472 | overlap 1107408 1107420 AGAGGTGCAAACACA TCTAAAG TTT CTTTAGA AATTCGACGCTTTTT FTM_1026 1109192 - 1107981 - | hypothetical protein TERM 612 1108123 - 1108103 - G 71 -5.4 -4.56597 | opp_overlap 1108114, overlap 1108106 TTTTTTGTGCAAAAA CAGCACCA TGACC TGGTGGTG TGACAGTACTAGGAT TERM 613 1109154 - 1109144 - G 79 -4 -5.40474 | ATGCGCTTAAAAAAA CTAT TAT ATAG CGCGATAAAAATTTA capC 1109658 - 1109194 - | capsule biosynthesis protein CapC capB 1110900 - 1109683 - | capsule biosynthesis protein CapB FTM_1029 1112211 - 1110976 - | major facilitator superfamily TERM 614 1111775 - 1111761 - G 80 -6.4 -4.72029 | GTGAAGCTAAGAAAA CTCCTG TGC CAGAAG ACATAGTAGCAAAAC TERM 615 1112626 - 1112642 + r 70 -8.7 -2.69468 | overlap 1112623 TCGAACCTGCTACCC TCGGCTT AGA AGGCCGA TGCTCTATCCAGATG ans 1113768 - 1112905 - | asparaginase cphB 1114802 - 1113984 - | cyanophycinase TERM 616 1114652 - 1114672 + g 75 -4.7 -4.88407 | opp_overlap 1114667 1114669, overlap 1114653 1114669 TATCTGGAAGTTTTG ATGCTGTTG GAA TAACAGCAA TTTTTGCTTCAGTAC TERM 617 1114653 - 1114671 + g 72 -8.2 -3.52321 | opp_overlap 1114667 1114669, overlap 1114652 1114669 ATCTGGAAGTTTTGA TGCTGTTG GAA TAACAGCA ATTTTTGCTTCAGTA FTM_1037 1115005 - 1116111 + | ribokinase, pfkB family protein TERM 618 1116202 - 1116181 - T 90 -10.9 -3.62096 | CTGCACTATCCTAAA GATACCCAC CTTC GCGGGTATC ACAGCAGAGTTATAG FTM_1038 1117051 - 1116389 - | haloacid dehalogenase-like hydrolase FTM_1039 1118083 - 1117070 - | glycosyl transferase group 1 family protein TERM 619 1117290 - 1117276 - G 73 -7.2 -4.08216 | CTATTTCCTGTAAAA CTTCTA TTT TAGAAG CTAGCACAGGAGTAC FTM_1040 1119093 - 1118086 - | glycosyl transferase family 2 protein FTM_1041 1120069 - 1119110 - | glycosyl transferase family 2 protein FTM_1042 1120761 - 1120078 - | hypothetical protein FTM_1043 1121472 - 1120843 - | methyltransferase domain family FTM_1044 1122751 - 1121465 - | hypothetical protein TERM 620 1122350 - 1122328 - G 71 -6.4 -4.18018 | TTTTCTTATTTAAAA TCAACTTTAA ACT TAAAAGTTGA TCATCCTTTACAAAA TERM 621 1122574 - 1122594 + g 75 -9.9 -2.76651 | opp_overlap 1122567 1122579, overlap 1122573 1122579 TAATAAAACTTTCTA TAAAAGGTA TAT TACCTTTTA CTGTTTCTGCTGTTA TERM 622 1122579 - 1122589 + g 71 -5.4 -4.53036 | opp_overlap 1122579, overlap 1122574 1122573 AAACTTTCTATAAAA GGTA TAT TACC TTTTACTGTTTCTGC FTM_1045 1124447 - 1122765 - | ATP-binding cassette (ABC) superfamily protein TERM 623 1123763 - 1123775 + g 72 -2.7 -5.28281 | TCATAAATACTTTTT CTTTA TTA TAGAG TTTTATTTCTTTTAT TERM 624 1124176 - 1124160 - G 70 -4.5 -4.65838 | TATAGAGTTTAAAAA TTTAGTT TGA AACCAAA ACAGAATAACTCCGA FTM_1046 1125673 - 1124444 - | glycosyl transferase group 1 family protein TERM 625 1124581 - 1124591 + g 80 -6.8 -4.67755 | opp_overlap 1124581, overlap 1124586 GTTCATCTTGCCAAA GCTC TTT GAGC TTTTTAGCTAAATCT galE 1126696 - 1125677 - | UDP-glucose 4-epimerase TERM 626 1125933 - 1125946 + g 70 -3.9 -4.84359 | GCTCTCCAGCTAGGC TTATC TTGT GATAA TTTTTCTAACGCTAA FTM_1048 1128083 - 1126689 - | sugar transferase involved in lipopolysaccharide synthesis rpe 1128732 - 1128064 - | D-ribulose-phosphate 3-epimerase TERM 627 1128143 - 1128129 - G 73 -4.2 -4.94972 | overlap 1128131 TATCAGAATTAAAAA TAGCTG AAC CAGCAA CAAAGGCATTTACTC TERM 628 1128141 - 1128131 - G 71 -6.8 -4.08682 | overlap 1128129 TCAGAATTAAAAATA GCTG AAC CAGC AACAAAGGCATTTAC TERM 629 1129584 - 1129548 - g 85 -9.5 -4.08058 | opp_overlap 1129559 AAGCAATATTAGAAA TCAGCGATAAAGGTGTT GGA AATACCTTAGTCGCTGA AAATAATACGCTTTT kpsF 1128869 - 1129840 + | phosphosugar isomerase FTM_1052 1131042 - 1130344 - | hypothetical protein FTM_1053 1131854 - 1131039 - | hypothetical protein TERM 630 1131307 - 1131330 + g 71 -6.8 -4.14627 | overlap 1131290 TAAGCATTATAGTTA TGATTATGTC CATT GACATAAACA TTATTTATATCAAGA FTM_1055 1133155 - 1132193 - | metallo-beta-lactamase superfamily protein TERM 631 1133256 - 1133205 - R 100 -12.2 -4.36411 | opp_overlap 1133218, overlap 1133218 TATTAACCATTAAAA TAGATAACAAAAACTAATATTTTT TATA AAAAATATCAGTTTTTATTATATA GATACAAATAAATCT TERM 632 1133243 - 1133218 - R 86 -7.1 -5.28561 | opp_overlap 1133218, overlap 1133205 AATAGATAACAAAAA CTAATATTTTT TATA AAAAATATCAG TTTTTATTATATAGA TERM 633 1133218 - 1133243 + r 77 -4.9 -5.24796 | opp_overlap 1133218 1133205 AATAGATAACAAAAA CTAATATTTTT TATA AAAAATATCAG TTTTTATTATATAGA fabI 1134084 - 1133302 - | enoyl-ACP reductase I FTM_1057 1134360 - 1135073 + | hypothetical protein dnaJ 1139190 - 1138003 - | chaperone protein DnaJ TERM 634 1139176 - 1139192 + g 83 -8 -4.39877 | opp_overlap 1139176 ATAACAAAAAGAAAA GTGTGG ATAAA CCACAC TTTATTGATTATTAA TERM 635 1139192 - 1139176 - G 93 -8 -5.44638 | opp_overlap 1139176 ATAACAAAAAGAAAA GTGTGG ATAAA CCACAC TTTATTGATTATTAA dnaK 1141144 - 1139216 - | chaperone, heat shock protein, HSP 70 family TERM 636 1139313 - 1139335 + g 70 -4.1 -4.66953 | overlap 1139304 1139334 CCTTGGGCACCAGCA GCTTGAGCT TGCTC AGCATAAGC TTTTTGAGCTATTGG TERM 637 1140800 - 1140810 + g 77 -3.2 -5.57054 | TTCTGCAGAAACTTG TGGT GGA GCCA TTTTTTTGCCTTCTT grpE 1141832 - 1141245 - | chaperone GrpE (heat shock protein). Hsp70/Hsc70 protein regulator activity mltA 1141921 - 1143087 + | membrane-bound lytic murein transglycosylase A hemG 1143080 - 1144264 + | protoporphyrinogen oxidase TERM 638 1144343 - 1144326 - f 77 -8.5 -3.85567 | opp_overlap 1144340, overlap 1144329 AATCTTAAAGTCAAA CAAGCTA AAAC TAGCTTG CGAATCAAGAATTTT rplM 1144403 - 1144831 + | 50S ribosomal protein L13 rpsI 1144847 - 1145236 + | 30S ribosomal protein S9 mglA 1145296 - 1145913 + | macrophage growth locus, subunit A mglB 1145915 - 1146322 + | macrophage growth locus, subunit B FTM_1069 1147588 - 1146350 - | sodium-solute symporter family protein TERM 639 1146917 - 1146899 - G 72 -6 -4.33248 | opp_overlap 1146913 1146915 TAAGCTTACAATAAA TGCAGCAA TCA TCACTGCA TAAAATGCTGTTTTC TERM 640 1146913 - 1146927 + g 70 -4.2 -4.77719 | opp_overlap 1146899, overlap 1146915 ATGCAGCAATCATCA CTGCAT AAA ATGCTG TTTTCTTAGATTTTG rnhB 1148144 - 1147581 - | ribonuclease HII FTM_1071 1148889 - 1148146 - | rRNA methylase, SpoU family ptsN 1149337 - 1148882 - | PEP-dependent sugar phosphotransferase system FTM_1073 1149670 - 1149374 - | sigma54 modulation protein FTM_1074 1149789 - 1150034 + | hypothetical protein TERM 641 1150618 - 1150599 - g 74 -3 -5.30189 | gap 1, overlap 1150603 TAGAAGATCAAAAAA TTCATTCTA GTT TAGAA-GAA ATATATAAGGTTATC FTM_1075 1150040 - 1151392 + | GTPase FTM_1076 1151596 - 1151402 - | hypothetical protein TERM 642 1152536 - 1152552 + H 70 -3.7 -5.14563 | overlap 1152537 GTGGTCCTCTATTTA CGCATAA TAG TTATGCA TTTTTTGCTACAGAC TERM 643 1153283 - 1153265 - H 73 -3.9 -5.28683 | opp_overlap 1153273 ATGAACAGCAAAAAA TCCTTAG GCAAG CTAAAGA GCTGGGGTTTTATAA TERM 644 1153753 - 1153743 - H 81 -2.6 -5.66868 | opp_overlap 1153743 AACCAATGAAAAAAA TAAT ATT ATTA TGCTCTACAGTAATC TERM 645 1154099 - 1154078 - g 78 -2.3 -5.64328 | AACAAAAAAATAAAA CCTCAACAA GCAA TTATCGAAG CAAGTTCAGGCAATA TERM 646 1154498 - 1154480 - g 73 -4.6 -4.84673 | overlap 1154473 1154482 GCAAAGAAGATAAAA GAGTTTTT TCC AAAAACAC AAGTTATTATGCCAG cysK 1153916 - 1154839 + | cysteine synthase FTM_1080 1155101 - 1155670 + | disulfide bond formation protein DsbB family TERM 647 1156160 - 1156176 + F 73 -9.5 -2.59935 | overlap 1156159 TACAAGCTATCATCG CCAAAAC TGT GTTTTGG GTTATAAAGATATTT TERM 648 1157302 - 1157315 + F 71 -4.5 -4.7254 | TTCATCTTACGATTT CGCAG AGTG CTGTG TTTTTGATAAACAGT TERM 649 1158567 - 1158584 + F 74 -7.7 -3.72485 | TAAATCATGCTCCTA CTGCTTG TATG CAAGCGG TTTCAGATTCTATTT TERM 650 1158604 - 1158616 + F 79 -7.7 -4.2354 | AGATTCTATTTCACT CCCTT TAT AAGGG TTCTTTTCACCTTTC TERM 651 1159427 - 1159446 + F 73 -9.2 -2.65808 | opp_overlap 1159418, overlap 1159424 TAAGGAGGTGATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 652 1161505 - 1161489 - g 79 -4.5 -5.28481 | TACTCAACTAAAAAA TACAAAG ATA CTTTATA GAAAAGGCTTGATAT TERM 653 1163299 - 1163272 - g 77 -5 -5.07053 | AATGACTCCAAAAAA GCTTATAAATTC TTTA AAAATTATAAGC CAGAAGAAAGCTCAA pdpA1 1161310 - 1163772 + | hypothetical protein TERM 654 1164882 - 1164892 + G 73 -4 -5.04265 | opp_overlap 1164882 CATATGACTTATCAA TGAT TAC ATCA TTTTTAATATTTTTT pdpB1 1163777 - 1167058 + | hypothetical protein FTM_1088 1167048 - 1167425 + | lipoprotein, putative TERM 655 1167485 - 1167471 - g 75 -8.6 -3.42056 | ATTTTCAACTTAGAA GAGCAA GGC TTGCTC ATAGATATCAAAGAT FTM_1089 1167438 - 1167932 + | hypothetical protein FTM_1090 1167937 - 1169601 + | hypothetical protein FTM_1091 1169669 - 1170190 + | hypothetical protein TERM 656 1170415 - 1170432 + G 76 -4.2 -5.14563 | opp_overlap 1170417 ACACAATGGTTACTA TATTCC GCCTCA GGAATA TTTTTTCATAGAAGA TERM 657 1171031 - 1171013 - g 82 -7.5 -4.6038 | GAGAGTAAACTAAAA CATCATC AAAAA GATGATG CTCAAGCAATAGAAG FTM_1092 1170203 - 1171633 + | hypothetical protein FTM_1093 1171646 - 1172263 + | hypothetical protein TERM 658 1172604 - 1172593 - gf 80 -2.2 -5.73563 | ATCAAAGCAAAAAAA CCAG CTAG CTGA AAAAGGAATAAACAA FTM_1094 1172285 - 1173436 + | hypothetical protein FTM_1095 1173402 - 1174175 + | hypothetical protein TERM 659 1174258 - 1174240 - g 71 -7.6 -3.58518 | opp_overlap 1174239 AATATGAACTAAATA TCTATTTT GAG AAAATAGA GTTACCTAAAACAGC TERM 660 1176138 - 1176126 - g 71 -3.4 -5.09521 | CTAACAAATGAAAAA GAAG ATGGA CTTC GAAAAGTTATGTTGA TERM 661 1176743 - 1176732 - g 70 -2.2 -5.23292 | GGAGAGAAAATAAAA GTCG TAAA CAAC TACAATAGCTATGCT pdpC1 1174215 - 1178201 + | PdpC FTM_1097 1178219 - 1178794 + | hypothetical protein iglD1 1179997 - 1178801 - | intracellular growth locus protein D iglC1 1180647 - 1180018 - | intracellular growth locus C protein iglB1 1182184 - 1180664 - | intracellular growth locus protein B iglA1 1182752 - 1182198 - | intracellular growth locus protein A pdpD1 1186564 - 1182833 - | hypothetical protein FTM_1103 1187778 - 1186795 - | hypothetical protein TERM 662 1189508 - 1189526 + r 77 -9 -3.54543 | opp_overlap 1189499 1189511, overlap 1189511 TATAGATAGCATAGC TAATGTTG AAT CAACATTA TTTGACCCAATCACT TERM 663 1190013 - 1190031 + r 88 -4 -5.74122 | ACTACTTATAATTCT TAAATTAG ATA TTAATTTA TTTTTTTCTATCATG FTM_1106 1190505 - 1190083 - | lipoprotein, putative nadE 1191358 - 1190609 - | NAD+ synthetase FTM_1108 1192959 - 1191487 - | outer membrane efflux protein TERM 664 1192654 - 1192665 + g 74 -5.8 -4.62441 | opp_overlap 1192651 1192654, overlap 1192651 CGCGGTAGGTAACCA GCCA TAGT TGGC TTTATTTATCTCAGC FTM_1109 1193991 - 1192969 - | membrane fusion protein FTM_1110 1195542 - 1194013 - | drug:H+ antiporter-1 (DHA2) family protein TERM 665 1194203 - 1194217 + g 73 -7.2 -4.03141 | GGCAAGCTATGGCTC CAACTT TGA AAGTTG TTATTTAGTGATGAT TERM 666 1194917 - 1194941 + g 80 -2.9 -5.75822 | opp_overlap 1194917 1194918 1194923, overlap 1194918 CCTATTGCCATAAAA CCAAAACTGAT ATA ATCAATTTTGA TTTTTTTGATTTGTG TERM 667 1194941 - 1194917 - G 78 -7.3 -4.38712 | opp_overlap 1194917 1194918, overlap 1194918 1194923 CCTATTGCCATAAAA CCAAAACTGAT ATA ATCAATTTTGA TTTTTTTGATTTGTG TERM 668 1194940 - 1194918 - G 73 -8.6 -3.22906 | opp_overlap 1194917 1194918, overlap 1194917 1194923 CTATTGCCATAAAAC CAAAACTGAT ATA ATCAATTTTG ATTTTTTTGATTTGT FTM_1111 1195707 - 1196534 + | transcriptional regulator AraC family protein FTM_1112 1198213 - 1196522 - | long chain fatty acid CoA ligase TERM 669 1197388 - 1197369 - G 70 -8 -3.18366 | overlap 1197367 TTGGGAATTAAGACA TTTTTTGC ACCA GCAAAAAA GAAGCAAAGTAAATT TERM 670 1197586 - 1197604 + g 85 -6.8 -5.37043 | GCAAACATAGTATAT CTTGTTTT GTT AAAACAGG TTTTTTATATAAACT FTM_1113 1199802 - 1198321 - | proton-dependent oligopeptide transporter (POT) family protein, di- or tripeptide:H+ symporter FTM_1114 1200767 - 1200039 - | hypothetical protein FTM_1115 1200838 - 1201524 + | hypothetical protein FTM_1116 1202212 - 1201514 - | hypothetical protein TERM 671 1202171 - 1202160 - G 79 -4.4 -5.25735 | CCAAAAAATGAAAAA GCAA ATAA TTGC AAAGGTAAGAATAAT FTM_1117 1202942 - 1202217 - | hypothetical protein FTM_1118 1203713 - 1202952 - | ATP-binding Cassette (ABC) superfamily protein TERM 672 1203235 - 1203221 - G 75 -7.2 -4.09353 | opp_overlap 1203220 1203221, overlap 1203216 CATCTAAAAATACAA CTTTAG GAT CTAAAG CTATTGTTCTTGCTA FTM_1119 1204828 - 1203728 - | ABC-type transport system permease protein TERM 673 1204447 - 1204462 + g 71 -3.2 -5.09762 | ACAGAATAGCACCTA GAAAGC CAAT GCTTGC TTTTATTTCTTGAAG rluD 1206691 - 1205693 - | ribosomal large subunit pseudouridine synthase D comL 1206780 - 1207604 + | competence lipoprotein ComL TERM 674 1209439 - 1209423 - g 73 -4.3 -4.8543 | opp_overlap 1209423 CAATGGTCAGAAAAA GCAGCTC AAG AAGCAGC TAAATTTATCGATGT serC 1209114 - 1210166 + | phosphoserine aminotransferase cmk 1210153 - 1210818 + | cytidylate kinase FTM_1127 1211446 - 1210835 - | short chain dehydrogenase FTM_1128 1211973 - 1211449 - | peroxiredoxin, AhpC-TSA family protein oxyR 1212071 - 1212940 + | oxidative stress transcriptional regulator FTM_1130 1213674 - 1212943 - | hypothetical protein FTM_1131 1213960 - 1213688 - | hypothetical protein FTM_1132 1214808 - 1214029 - | hypothetical protein FTM_1135 1219148 - 1217739 - | hypothetical protein vanY 1219608 - 1219135 - | D-alanyl-D-alanine carboxypeptidase dnaQ 1220294 - 1219602 - | DNA polymerase III, epsilon subunit FTM_1139 1222055 - 1221840 - | hypothetical membrane protein phnA 1222330 - 1222061 - | phosphonoacetate hydrolase TERM 675 1222709 - 1222695 - R 71 -5.8 -4.45577 | ACAAATGGTACAAAA TCTTTA TTA TAAAGA TTAGCAGTGTAATCA FTM_1142 1224539 - 1223940 - | peroxiredoxin of the AhpC/TSA family FTM_1143 1224631 - 1225212 + | haloacid dehalogenase-like hydrolase TERM 676 1225590 - 1225601 + G 72 -5.8 -4.36649 | TGCCTGATACTGACT CACC TAAA GGTG TTATTTTATACTATC TERM 677 1226321 - 1226300 - g 81 -5.9 -4.84359 | opp_overlap 1226304 1226319 TTATTTCTACAAAAA CATATTCCA AATA TGGAATTTG CTGAGGCAATATTTA FTM_1144 1225265 - 1226767 + | hypothetical protein TERM 678 1227362 - 1227352 - f 72 -4.6 -4.96848 | TTCTCTACACAAAAA GGCA TAT CGCC TCTTCCTCCATTAAA FTM_1146 1227585 - 1228070 + | hypothetical protein FTM_1147 1228798 - 1228163 - | ubiquinone biosynthesis protein FTM_1148 1229326 - 1228814 - | major facilitator superfamily (MFS) transport protein mdh 1229477 - 1230436 + | malate dehydrogenase, NAD-dependent TERM 679 1230500 - 1230518 + F 72 -4.6 -4.90906 | AACTGACTCACCAAT GTCAAGTG CAA TATTTGAC TTTTTAGTATTCTAA TERM 680 1231505 - 1231517 + G 81 -7.7 -4.31164 | opp_overlap 1231505, overlap 1231501 CAGATGAAAAACGTA CAGCA GTA TGCTG TTTATCTTCTGTAAA TERM 681 1231835 - 1231825 - g 84 -8.2 -4.56597 | CTTGGTGCTGAAAAA GGCG AAG CGCC AGACATGGCAGGAAC nrdA 1230640 - 1232412 + | ribonucleoside-diphosphate reductase, alpha subunit grxA 1232416 - 1232676 + | glutaredoxin 1 TERM 682 1232852 - 1232832 - g 78 -7.7 -4.15884 | overlap 1232834 TGAAGTAAATAAGAA TATTCTTCT TGT AGAAGAACA CATCCGAACCGTACC TERM 683 1232850 - 1232834 - g 73 -8.1 -3.65974 | overlap 1232832 AAGTAAATAAGAATA TTCTTCT TGT AGAAGAA CACATCCGAACCGTA TERM 684 1233812 - 1233792 - g 70 -3.9 -4.91459 | overlap 1233796 TAATATTGAGAAAAA CCCACTAAC ATG GTTAGAGTG GATACTAAATGGTGC FTM_1152 1232683 - 1233915 + | bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta subunit FTM_1154 1235914 - 1236516 + | DJ-1/PfpI family protein TERM 685 1237433 - 1237421 - g 70 -4.1 -4.77719 | CAAAATTTAATAAAA CCAGT CTA ACTAG AGTAGCAAAAATACT FTM_1155 1236523 - 1237572 + | DNA-damage inducible protein P TERM 686 1238525 - 1238512 - T 70 -5.3 -4.56133 | overlap 1238506 CTTCAACAAGTAAAA CCATA TTTT TATGG CTTGACAAAAAAACT TERM 687 1238832 - 1238849 + T 81 -2.7 -5.71983 | opp_overlap 1238822 ACAAACTCAAAGGCT GCTTTAA GTAA TAAAAGC TTTTTTTCTCCTTCA TERM 688 1238919 - 1238903 - T 73 -3.7 -5.19212 | opp_overlap 1238906, overlap 1238906 ATCATCATTAAAAAA TATCTGA ATA TCAGTTA TCATTTCACTAAGTA FTM_1158 1239684 - 1239028 - | hypothetical protein TERM 689 1239830 - 1239815 - R 70 -9 -2.52464 | opp_overlap 1239813 1239811 1239810 TTGCTTCGCAAGGTA CTCCTC TCAA GAGGAG AATCATTCTTTACTA TERM 690 1240550 - 1240563 + r 71 -6.7 -3.89302 | TTCTATTTTAGCTTC GAGCT TTTC AGCTC TTTGCTCTAGTTGAT FTM_1161 1243280 - 1241193 - | N-6 DNA Methylase family TERM 691 1241649 - 1241637 - G 76 -6.3 -4.58685 | opp_overlap 1241637 AAACTTTTTCAAAAA GACTA AAC TAGTC TTTACAGTTGCTCCT TERM 692 1243169 - 1243182 + g 80 -2.5 -5.71295 | opp_overlap 1243169 TAAACTCTAAGACCA TAAAA GCAG TTTTA TTTTTCTTTTTGTCT TERM 693 1243380 - 1243400 + r 70 -4 -4.92239 | TTTATTTTTTAATGG GGCAAAAA TGTAC TATTTGCC TTTTTCAGTTTTTAA FTM_1162 1244493 - 1243510 - | tRNA-dihydrouridine synthase TERM 694 1243656 - 1243670 + g 83 -6.4 -5.01811 | TACGGATTTCTTTAA CTGCTA CTT TGGCAG TTTTTAGTTTAATAA prmA 1245328 - 1244483 - | 50S ribosomal protein L11 methyltransferase yghD 1246708 - 1245551 - | Fe-dependent alcohol dehydrogenase YqhD TERM 695 1246609 - 1246621 + g 80 -4.9 -5.28176 | opp_overlap 1246609 CTCCACCATAAACTA TCAAA ACT TTTGA TTTTTTATCAATCAC lldD 1250983 - 1249841 - | L-lactate dehydrogenase TERM 696 1250531 - 1250521 - G 73 -4 -5.15167 | CAGCATTAACAAAAA TTGT CTG ACAA CCACAAGCCTTTGCT tyrS 1253423 - 1252233 - | tyrosyl-tRNA synthetase TERM 697 1252456 - 1252467 + g 82 -4.4 -5.46629 | opp_overlap 1252456 ACAACATTTATATCA TCAG GTAT CTGA TTTTTTTGGAATCTT lplA 1253537 - 1254439 + | lipoate-protein ligase A FTM_1169 1255191 - 1254442 - | hypothetical membrane protein hslV 1255383 - 1255934 + | ATP-dependent protease HslV, peptidase subunit TERM 698 1257274 - 1257262 - g 88 -7.7 -4.87291 | TATGTCAATGAAAAA CTAGG AAA CCTAG TTAAGAATAAAGATC hslU 1255942 - 1257309 + | ATP-dependent protease HslVU, ATPase subunit TERM 699 1257833 - 1257850 + F 78 -4.1 -5.35222 | TTTTTCTGGAATTAT GCTGGTA TGAA TATCGGC TTTTTTATCGGTTTT FTM_1173 1258943 - 1260100 + | potassium channel protein TERM 700 1260599 - 1260624 + G 73 -7.7 -3.80573 | TCTCTACAGGATCTC GTCCATATCAT CCTG ATGATATTGAC TTTACTCATCCTAGA udhA 1260196 - 1261596 + | soluble pyridine nucleotide transhydrogenase (STH)(NAD(P)(+) transhydrogenase [B-specific]) TERM 701 1261649 - 1261661 + G 79 -5.5 -5.17054 | TATTTCTATTTGGTG CTGCT ATT GGCAG TTTTTTGAATGTTGT pilD 1261627 - 1262418 + | Type IV pili leader peptidase and methylase TERM 702 1262853 - 1262841 - g 83 -6.3 -4.93696 | TCTAAACATCAAAAA GTATG CTA CATAC ATCCAGCAAGGCAGT FTM_1176 1262458 - 1263303 + | hypothetical protein TERM 703 1263613 - 1263602 - g 71 -3 -5.15117 | CAAAATCTCAAAAAA TCAA ATTG TTGA GTATTCCCCTATTAC TERM 704 1263931 - 1263909 - g 85 -6.4 -5.26918 | ATACTTGATAAAAAA CATCGCTTAA TGT TTAAACAATG GCTAATAGCGAGTAA blaA 1263312 - 1264196 + | beta-lactamase class A pth 1264189 - 1264764 + | peptidyl-tRNA hydrolase TERM 705 1265536 - 1265513 - g 82 -7.6 -4.46854 | gap 1 CTATGGAACAAGAAA TTTC-TCAGCT AGA AGCTGATGAAA AACTAGAATTTTTAG ychF 1264783 - 1265874 + | GTP-binding protein YchF FTM_1180 1265889 - 1266164 + | lipoprotein, putative TERM 706 1266616 - 1266606 - T 72 -4 -5.0133 | TATTGGTTGAAAAAA TTCT TAA AGAA AGAGGAGTAAATGTA FTM_1182 1269013 - 1267754 - | transporter-associated protein, HlyC/CorC family rplY 1269399 - 1269109 - | 50S ribosomal L25p family prsA 1270467 - 1269499 - | ribose-phosphate pyrophosphokinase TERM 707 1271403 - 1271377 - R 71 -7.5 -3.8579 | gap 1, overlap 1271392 ATCCAACAACTCAAA CCATT-AGTATC AGAA GATACTGAATGG ACAGTCTCTGACAAA FTM_1187 1274245 - 1272968 - | major facilitator superfamily TERM 708 1274630 - 1274640 + r 74 -5.4 -4.90266 | TTAATAACTATAGTC GCTA GCT TAGC TTTTTACTTACTAAA TERM 709 1275277 - 1275267 - R 70 -4 -5.0065 | TAGCGATAAAGAAAA TGTT ATA AACA TCCAAGCTAATTTCT FTM_1189 1276531 - 1275356 - | monovalent cation:proton antiporter family protein TERM 710 1275584 - 1275602 + g 73 -9 -3.33003 | overlap 1275575 TGTTCTCTGTCTAAG TGCTTTAA ATA TTAAAGCA TTGATAGTTGTATTC FTM_1190 1277261 - 1276629 - | nicotinamide ribonucleoside (NR) uptake permease (PnuC) family protein TERM 711 1277225 - 1277209 - G 72 -5.9 -4.32201 | GCAACTAATTCAAAA TACGACT GAT AGTCATA AAATGATGATACTAT FTM_1191 1277764 - 1277261 - | isochorismatase family protein TERM 712 1279196 - 1279182 - g 70 -4.2 -4.73448 | opp_overlap 1279184, overlap 1279184 AGAGATATCTAAAAA GACTGC AGA GCAGTT TGCTAGGATAAATAC FTM_1193 1278565 - 1279263 + | aldolase/adducin class II family protein TERM 713 1279851 - 1279829 - g 71 -5.7 -4.62904 | AAATATTTTTAAAAA GTATACAGA TAACT TCTATATAC ATCTAGATGGTGCAT hdc 1279278 - 1280414 + | histidine decarboxylase FTM_1195 1281213 - 1280401 - | hypothetical protein TERM 714 1280734 - 1280714 - G 72 -6.1 -4.42806 | TTACGCCCAAATAAA GGTAGACCA AAA TGTTCCACC ACCATTTTCACTCCA TERM 715 1280821 - 1280831 + g 70 -4 -4.88222 | AAAAATAAGTTTATG TTCT CTT AGAA TTTTTAACTTTTGCT TERM 716 1281117 - 1281129 + g 78 -7.7 -4.11751 | overlap 1281122 1281124 TCGCCTCTAAATTCT CTGGT GTT ACCAG TTTTGGCAAATTGGT TERM 717 1281356 - 1281325 - H 72 -6.8 -4.08958 | opp_overlap 1281327 1281331, overlap 1281304 1281327 TTATGAAATAAAATA CATGAACTTTAATA CATA TAATAAAGTTCATA GTTCAAGAGAGGAGA TERM 718 1281894 - 1281884 - g 86 -5.4 -5.61596 | ATGCCTACAAAAAAA CAAC AAA GTTG GACTTTCTTAACAAA FTM_1197 1281869 - 1282165 + | hypothetical protein FTM_1198 1282774 - 1282187 - | hypothetical membrane protein FTM_1199 1284238 - 1282823 - | DNA recombination protein RmuC family protein TERM 719 1283782 - 1283802 + g 74 -5.6 -4.68384 | TTCGTTCAGTGAGTT TTTTTGAA CTATC TTCAAAAA TTTTATTAGCTAAAT TERM 720 1284225 - 1284209 - G 75 -8.1 -3.74868 | opp_overlap 1284206 1284205, overlap 1284205 GCCAAAAATAATTAA TAGCATT ATT AATGCTA TAGCTAGTATCATTT ruvA 1284914 - 1284264 - | holliday junction DNA helicase, subunit A FTM_1201 1286120 - 1284927 - | sugar transporter, MFS superfamily ruvC 1286717 - 1286202 - | crossover junction endodeoxyribonuclease RuvC TERM 721 1286258 - 1286276 + g 70 -8.2 -3.26531 | opp_overlap 1286256, overlap 1286256 1286272 TTTTTGCCAATGATT TGCTACTA TGG TAGTGGCA TATTGCTATTGCTAA TERM 722 1286302 - 1286316 + g 74 -5.6 -4.7254 | GCTAAAGCATCCGCA GCATCC TCT GGAGGC TTTTTGCTCAAACCT FTM_1203 1287560 - 1286814 - | hypothetical protein FTM_1204 1288235 - 1287576 - | hypothetical protein lipA 1289248 - 1288265 - | lipoic acid synthetase TERM 723 1289622 - 1289605 - g 73 -7.1 -4.03167 | CAATACGAAGAAGAA CTTTTTC ATGC GAAAAAG ATAATGAAATTTATC TERM 724 1289796 - 1289807 + G 70 -4.4 -4.69656 | opp_overlap 1289796 AGAAGAAAAAGAGCA CTCT ACTA AGAG TTTTCTTCAATGGTT ftnA 1289455 - 1289955 + | ferric iron binding protein, ferritin-like protein FTM_1207 1291526 - 1289958 - | proton-dependent oligopeptide transporter (POT) family protein, di- or tripeptide:H+ symporter grxB 1291588 - 1292232 + | glutaredoxin 2 TERM 725 1292700 - 1292689 - g 91 -4.4 -5.84432 | overlap 1292692 TACAACACAAAAAAA TCAC TATC GTGA TAGGTACGAATATCA TERM 726 1292772 - 1292751 - g 74 -5.9 -4.4784 | overlap 1292753 CAAAGGCTAAACAAA GAGATGTTT ACAA AAACATCGC AACTGCTCAAGAAAT TERM 727 1292770 - 1292753 - g 70 -7.1 -3.8323 | overlap 1292751 AAGGCTAAACAAAGA GATGTTT ACAA AAACATC GCAACTGCTCAAGAA rnfB 1292234 - 1292863 + | iron-sulfur cluster-binding protein TERM 728 1292895 - 1292875 - g 74 -5.5 -4.73828 | ATAAGCAAAAAAGAA TCCAGATTT TTG AAATATGGA AACAAAATGACCCAA nth 1292856 - 1293494 + | endonuclease III FTM_1211 1293491 - 1293919 + | hypothetical protein TERM 729 1294433 - 1294452 + G 77 -5.2 -4.8622 | opp_overlap 1294436 TTCTTTACCTTTTAA TAATAATA TTTT TATTATTA TTTTTCCTTAAAAAC FTM_1212 1293919 - 1295178 + | hypothetical membrane protein FTM_1213 1295294 - 1295980 + | hypothetical protein TERM 730 1296465 - 1296449 - g 100 -9.5 -4.84539 | opp_overlap 1296444 1296442 1296441 TAACTAAATATAAAA TGCTTCT TAC AGAAGCA GGTTATACTTTAGTA TERM 731 1298595 - 1298572 - g 88 -6.9 -4.88295 | AAAGAAATCCAAAAA GTTATGTTT GATTTT AAACATAAC AAGTACCATATATTA mfd 1296025 - 1299450 + | transcription-repair coupling factor ilvN 1300961 - 1300644 - | acetolactate synthase, small subunit ilvD 1304488 - 1302806 - | dihydroxy-acid dehydratase TERM 732 1303898 - 1303921 + g 79 -4.6 -5.243 | gap 1, opp_overlap 1303896 1303901, overlap 1303899 AGTATACATACCACC ACATGCTCCAG CAC CTGGA-CATGC TTTTTTGATAGTTTC TERM 733 1303899 - 1303920 + g 75 -8.1 -3.72953 | gap 1, opp_overlap 1303896 1303901, overlap 1303898 GTATACATACCACCA CATGCTCCAG CAC CTGGA-CATG CTTTTTTGATAGTTT TERM 734 1307742 - 1307762 + H 70 -8.4 -3.08211 | overlap 1307740 ATGTCACGCTTTTGA GATGACAA AATTG TTGTCATC TACTTTTAGAAAAAT FTM_1220 1307899 - 1308126 + | transcriptional regulator TERM 735 1308911 - 1308896 - g 82 -7.6 -4.49756 | opp_overlap 1308896 TGTTAAATACCAAAA TGAAGG TGGG CCTTCA TTTATTGACTGTTTT TERM 736 1308896 - 1308911 + G 81 -7.6 -4.27911 | opp_overlap 1308896 TGTTAAATACCAAAA TGAAGG TGGG CCTTCA TTTATTGACTGTTTT FTM_1221 1308129 - 1309487 + | transcription regulator FTM_1222 1310690 - 1309509 - | hypothetical protein FTM_1223 1310965 - 1310705 - | hypothetical protein FTM_1227 1313574 - 1313317 - | hypothetical protein rdgC 1314439 - 1313579 - | recombination associated protein FTM_1229 1314629 - 1315615 + | putative rhodanese, sulfurtransferase TERM 737 1315985 - 1315995 + T 74 -5.4 -4.85129 | overlap 1315991 AATCTATACGACTAT CATC ACG GATG TTTTTAATATATCCT rep 1318647 - 1316632 - | UvrD/REP superfamily I DNA and RNA helicase FTM_1232 1319387 - 1318641 - | hypothetical protein FTM_1233 1320009 - 1320512 + | isochorismatase hydrolase family protein TERM 738 1321358 - 1321348 - g 70 -4 -4.8384 | TAAATAACTTAAAAA GTAA CCA TTAC AATATATTCAAATGG FTM_1235 1321200 - 1321688 + | isochorismatase hydrolase family protein TERM 739 1321789 - 1321779 - T 72 -6.8 -4.12188 | TGATTATTTTGAAAA CCTC CTT GAGG ACCATTATTTGTCTG FTM_1236 1322296 - 1321838 - | hypothetical protein TERM 740 1321972 - 1321987 + g 72 -2.6 -5.30155 | overlap 1321980 AATTATTATCACTAG GATTTT GCTT AAGATC TTTTTTAGTTACTCG TERM 741 1322252 - 1322240 - G 73 -7.7 -3.87551 | ATTATCAAAGCTAAA TGCTG GAG CAGCA AATATAAAACCTAAT talA 1323284 - 1322319 - | transaldolase pepB 1324801 - 1323422 - | cytosol aminopeptidase FTM_1239 1326186 - 1324804 - | putative outer membrane efflux protein alaS 1328791 - 1326194 - | alanyl-tRNA synthetase TERM 742 1328977 - 1328960 - g 91 -2.1 -6.50278 | AAATGAAAAAAAAAA TAATTAT TAGC ACAATTA TTATTAGTATTATCA FTM_1241 1328947 - 1329393 + | hypothetical protein TERM 743 1330941 - 1330951 + T 86 -2.6 -6.09196 | overlap 1330933 AATTGGTTAAAGATT TTAT CTA ATAA TTTTTTTCTTTTGAG FTM_1243 1331816 - 1331481 - | hypothetical protein FTM_1244 1331847 - 1332254 + | hypothetical protein FTM_1247 1333741 - 1334862 + | protein-disulfide isomerase TERM 744 1336265 - 1336291 + T 70 -5.3 -4.60041 | TAGTAGCTTCGCTAT GTCTATTTTTA CTAAT TAAACATAGAC TTTTTCCAAATCAGT FTM_1249 1337165 - 1336311 - | peptide methionine sulfoxide reductase TERM 745 1336342 - 1336352 + g 82 -5.4 -5.23316 | opp_overlap 1336342 TGACTATGACAGTAA GGTA AAG TACC TTTTTTCATATAATA betT 1339714 - 1337762 - | betaine/carnitine/choline transporter (BCCT) family protein TERM 746 1338068 - 1338084 + g 73 -8.7 -3.22894 | overlap 1338058 1338080 CATTTCAGTAGCGAC CTCTAGC ACT GCTGGAG TTACTACCTGTTGTA TERM 747 1338688 - 1338670 - G 73 -3.8 -5.09762 | CCGGAATAAATAAAA CACCTATT ATA AATTGGCG GATTGTCCTACCTTT TERM 748 1339686 - 1339699 + g 100 -8.1 -5.96894 | opp_overlap 1339685 GCAGGATAAAATACC GGAGC ATAA GCTCC TTTTTTTCTTTGCAT spoU 1339856 - 1340608 + | rRNA methyltransferase FTM_1253 1340702 - 1341649 + | choloylglycine hydrolase family protein FTM_1254 1341814 - 1342167 + | hypothetical protein TERM 749 1342337 - 1342326 - T 72 -4.4 -5.09245 | TTAAAATCACAAAAA GGTA TACA TACC AATGATGAAGCCAAA TERM 750 1342741 - 1342729 - T 75 -4.9 -5.17353 | AGATTTACTAAAAAA TGTAT ATA ATACA AAAGTTATCGCTGAT TERM 751 1342897 - 1342925 + T 72 -8.4 -3.36054 | opp_overlap 1342895, overlap 1342895 TTTGATAGAGAATTT CTTTTCTAAAAT TAAGC ATTTTAGAAGAG TATTCTCTAGATTTG TERM 752 1343282 - 1343295 + T 100 -8.1 -5.95539 | opp_overlap 1343281 AAAAAACAAAAATTT GCCAC CTAA GTGGC TTTTTTTGTTTGGCA TERM 753 1343547 - 1343560 + T 70 -3.9 -5.02502 | TATAAGTTTGTTGAT TAACT CATC AGTTA TTTTTATCTCATATG FTM_1256 1344282 - 1343989 - | hypothetical protein TERM 754 1344989 - 1345009 + r 70 -5.5 -4.27467 | GCTACTCTTTTTAGC TCTTCTATA GCA TTTAGAAGA TTTATTGACTTATGA TERM 755 1345732 - 1345754 + r 82 -6.4 -5.22312 | CCTTTTGTAATTCTA TATTTTTAGG CAG CCAAAAAATA TTTTTTGATGTAAAT TERM 756 1348621 - 1348631 + r 82 -6.8 -4.88736 | TCATCTAGCTTTTTG CTCG ACT CGAG TTTTTCTAACTCATC fopA 1352126 - 1350948 - | outer membrane protein FopA FTM_1262 1352481 - 1352236 - | 4Fe-4S ferredoxin coaD 1352974 - 1352486 - | phosphopantetheine adenylyltransferase FTM_1264 1353537 - 1352986 - | hypothetical protein FTM_1265 1353907 - 1353551 - | hypothetical protein sufS 1355151 - 1353928 - | selenocysteine lyase sdaA 1356627 - 1355254 - | L-serine dehydratase FTM_1268 1357351 - 1356683 - | predicted metal-dependent hydrolase pheA 1358219 - 1357377 - | prephenate dehydratase TERM 757 1359034 - 1359010 - R 83 -8.7 -4.10007 | opp_overlap 1359014, overlap 1359014 ATAATCGCCCCAAAA TAAAGTGGGTA CAT TATCCACTTTA CTCCAAAGCTTTGTG TERM 758 1359014 - 1359030 + r 71 -7.3 -3.73072 | opp_overlap 1359010 1359014 TCGCCCCAAAATAAA GTGGGTA CAT TATCCAC TTTACTCCAAAGCTT TERM 759 1359030 - 1359014 - R 70 -5.1 -4.64861 | opp_overlap 1359014, overlap 1359010 TCGCCCCAAAATAAA GTGGGTA CAT TATCCAC TTTACTCCAAAGCTT alr 1361091 - 1359994 - | alanine racemase FTM_1272 1362597 - 1361104 - | proton-dependent oligopeptide transporter (POT) family protein, di- or tripeptide:H+ symporter TERM 760 1361394 - 1361370 - G 83 -10.1 -3.75024 | overlap 1361391 CCTTAGTAGGAACAA GTTGGGTTATC AAA GATAAACCAAC AGCTGTTGCCATAAT TERM 761 1361981 - 1361998 + g 76 -4.2 -5.14163 | TTGCCTACAGGAGCT GCTATT GTCGAA AATAGC TTTTTATTCATAAAT FTM_1273 1363429 - 1362722 - | hypothetical protein FTM_1274 1363836 - 1363441 - | hypothetical protein FTM_1275 1363923 - 1364945 + | integral membrane protein serB 1365584 - 1364934 - | phosphoserine phosphatase FTM_1277 1366198 - 1367655 + | proton-dependent oligopeptide transporter (POT) family protein, di- or tripeptide:H+ symporter FTM_1278 1368047 - 1367784 - | hypothetical protein TERM 762 1368267 - 1368256 - R 72 -4.4 -5.09245 | TTAAAATCACAAAAA GGTA TACA TACC AATGATGAAGCCAAA TERM 763 1368671 - 1368659 - R 75 -4.9 -5.17353 | AGATTTACTAAAAAA TGTAT ATA ATACA AAAGTTATCGCTGAT TERM 764 1368827 - 1368855 + r 72 -8.4 -3.36054 | opp_overlap 1368825, overlap 1368825 TTTGATAGAGAATTT CTTTTCTAAAAT TAAGC ATTTTAGAAGAG TATTCTCTAGATTTG rpoH 1369861 - 1368983 - | RNA polymerase sigma-32 factor FTM_1280 1370373 - 1369885 - | hypothetical protein secF 1371391 - 1370447 - | preprotein translocase, subunit F, membrane protein secD 1373347 - 1371410 - | preprotein translocase, subunit D, membrane protein TERM 765 1372891 - 1372902 + g 73 -4.4 -4.98522 | opp_overlap 1372881, overlap 1372881 AATTATCTAGTTGAG CATC AATA GATG TTTTTGTATCAGCTT yajC 1373760 - 1373404 - | preprotein translocase, YajC subunit FTM_1284 1374888 - 1374316 - | isochorismatase hydrolase family protein TERM 766 1375869 - 1375855 - R 71 -7.2 -3.75378 | opp_overlap 1375843, overlap 1375852 ATTCTTACAACATAA GTAAGT TTT ACTTAC ACATTAATGATAAAA tgt 1377842 - 1376739 - | queuine tRNA-ribosyltransferase TERM 767 1377602 - 1377617 + g 77 -4.7 -5.20216 | CCCAGCCGTTAAAGC CATGG AGTGAA CCATG TTTTTTGATAATCTC TERM 768 1377795 - 1377809 + g 72 -2.7 -5.28481 | AGTAATCTTACCTCT GCGGG CTTTA CCCTC TTTTTTGATTAGATC TERM 769 1378080 - 1378065 - R 72 -4.8 -4.95896 | overlap 1378075 ACAAAGTCATAAAAA TATCTA GTAA TAGATA ATACTTCTCTATAAA TERM 770 1378111 - 1378142 + r 74 -6.8 -4.25104 | gap 1 TAATAATTTTAGGGG CTGTCCTAG-ATAAC TAA GTTATGTTAGGATAG TTTTGATGAGAAGAA FTM_1289 1379091 - 1378825 - | hypothetical protein FTM_1290 1379588 - 1379247 - | hypothetical protein FTM_1291 1380224 - 1380838 + | hypothetical protein TERM 771 1382035 - 1382065 + G 77 -9.2 -3.15985 | opp_overlap 1382035, overlap 1382033 AAGGCTTCAACAAAA CTTTTAGTGTTATT ATA AATATCACTAGAAG TATTCCATATATTAT TERM 772 1382065 - 1382035 - g 80 -7 -4.64334 | opp_overlap 1382035 1382033 AAGGCTTCAACAAAA CTTTTAGTGTTATT ATA AATATCACTAGAAG TATTCCATATATTAT metIQ 1381854 - 1383326 + | methionine uptake transporter (MUT) family protein, membrane and periplasmic protein FTM_1294 1383397 - 1384608 + | hydroxy/aromatic amino acid permease (HAAAP) family protein FTM_1295 1384683 - 1385438 + | rhodanese-like family protein TERM 773 1385730 - 1385701 - g 91 -2.3 -6.23545 | gap 1, opp_overlap 1385715 1385729, overlap 1385715 1385729 CTGAAATAAAAAAAA TGCTTGATGAAAAA CAA TATTCCAT-AAGCA ATATTGATTGTACTA TERM 774 1385736 - 1385715 - g 70 -4.5 -4.7254 | opp_overlap 1385715 1385729, overlap 1385701 1385729 ATGCTTGATGAAAAA CAATATTCC ATAA GCAATATTG ATTGTACTATAATTG ispF 1385445 - 1385924 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase FTM_1297 1387614 - 1385929 - | Mur ligase family protein cphA 1390462 - 1387640 - | cyanophycin synthetase TERM 775 1387771 - 1387783 + g 77 -3.4 -5.56264 | AAGCCGAAAACATTT CTTG TTTCT CAAG TTTTTTATCTTTACC TERM 776 1390261 - 1390273 + g 71 -3.3 -5.03994 | CCTCTCTTAATCTAC GGATG AAT CCTCC TTTTTCTCTATAAGA glpQ 1392069 - 1391317 - | glycerophosphoryl diester phosphodiesterase TERM 777 1393028 - 1393018 - g 71 -6.8 -4.10925 | AGATATTGCTGAAAA GAGG ATT CCTC AGGATGGTAAATTTA pilB 1392227 - 1394005 + | Type IV pili ATPase TERM 778 1394845 - 1394861 + G 73 -9.5 -2.91695 | opp_overlap 1394842, overlap 1394842 GTATTTAAATCATCA CTAGCAA GAT TTGCTAG TACTTTAGAGATAAC pilC 1394020 - 1395249 + | Type IV pili polytopic inner membrane protein FTM_1304 1396889 - 1396500 - | hypothetical protein FTM_1305 1397112 - 1396852 - | hypothetical protein hemH 1397246 - 1398247 + | ferrochelatase TERM 779 1398843 - 1398821 - T 71 -7.1 -3.75845 | opp_overlap 1398820 TAAAACAATGGCAAA TTGGTGAAA GTGCT TCTCACCAA ATACTTGAGGAGTTT TERM 780 1401984 - 1401968 - T 82 -6.7 -4.85618 | opp_overlap 1401971 AAAGAAGTAACAAAA GAATATT GAA AATATTC CTAAAGTACTCAGTA uvrC 1403923 - 1402085 - | excinuclease ABC, C subunit TERM 781 1403517 - 1403533 + g 74 -2.2 -5.39721 | opp_overlap 1403517 GATATCGACACATAA GGTCCA AAACA TTGACC TTTTTTATATGCTGA rnd 1404032 - 1405126 + | ribonuclease D FTM_1313 1405155 - 1406369 + | drug:H+ antiporter-1 (DHA1) family protein FTM_1314 1406743 - 1406366 - | hypothetical protein rpmA 1407384 - 1407130 - | ribosomal protein L27 rplU 1407729 - 1407415 - | ribosomal protein L21 TERM 782 1407572 - 1407549 - G 70 -8.2 -3.20367 | overlap 1407552 CAACAACCTCACCAA CAACTTTAGC ACCA GCTACAGTTG GAGCGCCTATTTTAA secA 1412517 - 1409797 - | preprotein translocase, subunit A (ATPase, RNA helicase) TERM 783 1411585 - 1411601 + g 77 -5.2 -4.9934 | opp_overlap 1411585 ATGAGCTCTTAGACA TGCATT TAAGT AATGCA TTTTTGTAATATTGT TERM 784 1413556 - 1413540 - g 72 -8.1 -3.43081 | opp_overlap 1413540, overlap 1413538 ATAGAACTTCAAACA TTAGATG ACT CATCTAA TCAATTATCACCGAA FTM_1320 1412649 - 1413677 + | hypothetical protein FTM_1321 1413681 - 1414130 + | hypothetical protein deoD 1414849 - 1414127 - | purine nucleoside phosphorylase hflB 1417856 - 1415910 - | ATP-dependent metalloprotease TERM 785 1417178 - 1417168 - G 74 -5.4 -4.6759 | AACATCTCAACAAAA TCAG AGC CTGA AATTGAGAAAAATGG TERM 786 1417820 - 1417830 + g 72 -2.6 -5.24416 | AAAAAATAATATTTT TAAT CAT ATTA TTTTTATTATCATTA TERM 787 1418102 - 1418088 - R 70 -8.6 -2.6148 | opp_overlap 1418088, overlap 1418086 1418087 AAAAACAAAATAATC GCCTAT ACG ATAGGC TTAGTTATGCTTATT TERM 788 1418088 - 1418102 + r 76 -8.6 -3.51694 | opp_overlap 1418086 1418087 1418088 AAAAACAAAATAATC GCCTAT ACG ATAGGC TTAGTTATGCTTATT TERM 789 1418487 - 1418503 + r 80 -6.5 -4.86731 | GTAATAGCTGCGTTA GGACCAA TGC TTGGACC TTTTGTTTGGAGGAG uvrA 1422283 - 1419461 - | excinuclease ABC, A subunit TERM 790 1422301 - 1422289 - R 71 -4.9 -4.82901 | TTTTTTTCATAAAAA TTCTT GTA AAGAA ATATAGATTAGATTT greA 1422804 - 1422322 - | transcriptional elongation factor TERM 791 1422473 - 1422491 + g 74 -6 -4.47456 | TCAGCTTCATCTTCG CCAACTAT TTT ATAGGTGG TTTCTTCTTCAGTAT fimT 1423422 - 1422838 - | type IV pili, pilus assembly protein pgi 1425045 - 1423423 - | glucose-6-phosphate isomerase TERM 792 1424825 - 1424840 + g 72 -4.8 -4.78848 | TTAATCTTAGCACCA TTAAAC ATCT GTTTAA TTTTATCTTTAAGAC FTM_1329 1425685 - 1425032 - | predicted thiamine pyrophosphokinase guaB 1427211 - 1425751 - | IMP dehydrogenase/GMP reductase pepA 1428751 - 1427312 - | cytosol aminopeptidase TERM 793 1428704 - 1428723 + g 72 -9.4 -2.64572 | opp_overlap 1428703 1428700, overlap 1428700 TTCTTGAGCAACTAT CATTAGCT CAGC AGCTAATG TCGATTGATTATTTA FTM_1332 1428917 - 1429999 + | hypothetical protein FTM_1333 1429999 - 1431060 + | permease YjgP/YjgQ family protein FTM_1334 1431068 - 1432321 + | metallopeptidase M16 family protein TERM 794 1432418 - 1432428 + G 74 -6.8 -4.30844 | CAACTTAATTTCAGA GCTG GTT CAGC TTTTGATAGTAAGCT FTM_1335 1432328 - 1433551 + | Zn-dependent peptidase M16 family protein FTM_1336 1433552 - 1434130 + | N6-adenine-specific methylase FTM_1337 1434164 - 1434814 + | hypothetical protein miaE 1435478 - 1434867 - | tRNA-(ms(2)io(6)A)-hydroxylase udp 1435594 - 1436397 + | uridine phosphorylase cdd 1436418 - 1436819 + | cytidine deaminase TERM 795 1437035 - 1437049 + T 82 -4.3 -5.58209 | TCCTAATCTCAGTGT CAACA CTTTT TGTTG TTTTTTTCGATTTAA FTM_1342 1440046 - 1437017 - | 4Fe-4S ferredoxin, FAD dependent gpmI 1440264 - 1441802 + | phosphoglycerate mutase, cofactor independent serS 1441817 - 1443097 + | seryl-tRNA synthetase cscK 1443207 - 1444106 + | ROK family protein TERM 796 1444483 - 1444513 + G 78 -2 -5.61596 | opp_overlap 1444490, overlap 1444485 1444486 TTTCAAGCGCGGCTT CACTATAGTAATTA TAA TAATTGCTATAATA TTTTTTTATAACCAT TERM 797 1444486 - 1444510 + G 70 -8.1 -3.26036 | opp_overlap 1444490, overlap 1444485 1444483 CAAGCGCGGCTTCAC TATAGTAATTA TAA TAATTGCTATA ATATTTTTTTATAAC FTM_1346 1444184 - 1445443 + | multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) transporter FTM_1347 1445647 - 1445447 - | hypothetical protein FTM_1348 1446184 - 1445675 - | hypothetical protein cydD 1446561 - 1448342 + | ABC-type transport ATP-binding protein CydD TERM 798 1449466 - 1449450 - g 74 -2.2 -5.52347 | AACAAAATGAAAAAA TAGCGC TATTC GCACCA ACAGGAAAAGGCAAA TERM 799 1449692 - 1449677 - g 71 -7.6 -3.68341 | overlap 1449665 1449680 AATGCTACTGAAGAA GAGCTT CTAG AAGCTC TAGAAAAAGTTGAAT TERM 800 1449810 - 1449794 - g 71 -3 -5.06414 | gap 1, opp_overlap 1449794 GGCGGTCAACAAAAA CGC-CTA GCTT TAGCGCG TGCATTCTTACAAGA cydC 1448339 - 1449988 + | ABC-type transport ATP-binding protein CydC dctA 1451240 - 1449990 - | aerobic C4-dicarboxylate transport protein TERM 801 1450391 - 1450403 + g 70 -4.1 -4.75776 | opp_overlap 1450391 CTGATTTATCACAAC CTAGG TTT TCTAG TTTTTCCATTAAATT FTM_1352 1451759 - 1451379 - | endoribonuclease L-PSP TERM 802 1452844 - 1452816 - R 72 -8.4 -3.36054 | opp_overlap 1452814, overlap 1452814 CAAATCTAGAGAATA CTCTTCTAAAAT GCTTA ATTTTAGAAAAG AAATTCTCTATCAAA TERM 803 1453000 - 1453012 + r 75 -4.9 -5.17353 | ATCAGCGATAACTTT TGTAT TAT ATACA TTTTTTAGTAAATCT TERM 804 1453404 - 1453415 + r 72 -4.4 -5.09245 | TTTGGCTTCATCATT GGTA TGTA TACC TTTTTGTGATTTTAA FTM_1354 1454695 - 1453577 - | ABC transporter, membrane protein FTM_1356 1456424 - 1455621 - | hypothetical protein ugpQ 1456730 - 1457764 + | glycerophosphoryl diester phosphodiesterase family protein glpT 1457871 - 1459187 + | glycerol-3-phosphate transporter katG 1463195 - 1465420 + | peroxidase/catalase FTM_1362 1465524 - 1466849 + | dGTP triphosphohydrolase FTM_1363 1468053 - 1466833 - | metabolite:H+ symporter (MHS) family protein FTM_1364 1468458 - 1468114 - | hypothetical protein upp 1470095 - 1469466 - | uracil phosphoribosyltransferase chiA 1472619 - 1470289 - | chitinase, glycosyl hydrolase family 18 TERM 805 1471645 - 1471659 + g 73 -3.6 -5.07567 | CGCACCATTTACAGC TATTGC AAG GTAATA TTTTTTACCATCTGC TERM 806 1471826 - 1471852 + g 71 -7.4 -3.59315 | opp_overlap 1471822 AGCTCAACTGACTGC TTAGCAAAGTTT TCC ATACTTTGCTGA TTTGAAGCTAATTGC TERM 807 1472670 - 1472652 - H 74 -6.8 -4.29829 | opp_overlap 1472652 ACAACTATTAATAAA TGTAAGCA CAA TACTTACA CTTTGATTATATGAG kbl 1473153 - 1474349 + | 2-amino-3-ketobutyrate coenzyme A ligase tdh 1474372 - 1475427 + | L-threonine 3-dehydrogenase TERM 808 1476140 - 1476128 - g 74 -3.5 -5.22006 | CGATCACAAGAAAAA TATAA AGT TTATA AAATACTTAAAATTA FTM_1370 1475429 - 1476691 + | serine permease ispD 1477385 - 1476696 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 809 1476803 - 1476817 + g 75 -8.6 -3.51232 | opp_overlap 1476803 1476802 CAAACATTTCTAAAG CTGATG CTT CATCAG TTACTTTAGCAACAA ftsB 1477665 - 1477375 - | cell division protein, septum formation initiator eno 1479043 - 1477673 - | enolase (2-phosphoglycerate dehydratase) TERM 810 1478120 - 1478131 + g 70 -4.4 -4.74103 | ACCGACTAACTGTAC CTTG TTAC CAAG TTTTTCAGTTAAAAG TERM 811 1479141 - 1479166 + r 70 -6.3 -4.053 | TGCAATTTAATATAC TTATTTGAAGA TTAT TCTTCAGATGA TTTCTCTGAGATGAT FTM_1374 1480390 - 1479152 - | major facilitator superfamily (MFS) transport protein FTM_1375 1481257 - 1480493 - | nicotinamide mononucleotide transport (NMT) family protein FTM_1376 1482224 - 1481277 - | ROK family protein FTM_1377 1483189 - 1482224 - | ROK family protein FTM_1378 1484548 - 1483199 - | RNA methyltransferase, trmA family FTM_1379 1485209 - 1484637 - | hypothetical protein TERM 812 1485309 - 1485322 + r 87 -8.1 -4.68994 | opp_overlap 1485309 TTAGACATAAAAAAA GCGAC TTAA GTCGC TTTTTAAATCATGGT TERM 813 1485322 - 1485309 - R 100 -8.1 -5.76633 | opp_overlap 1485309 TTAGACATAAAAAAA GCGAC TTAA GTCGC TTTTTAAATCATGGT TERM 814 1485367 - 1485383 + r 70 -8.7 -2.62616 | overlap 1485335 TCGAACCCCCGACCC TCGCCTT GTA AGGGCGA TGCTCTCCCAGCTGA rpoZ 1485692 - 1485474 - | DNA-directed RNA polymerase, omega subunit TERM 815 1485541 - 1485554 + g 83 -2.3 -5.8096 | opp_overlap 1485541 GCAATTTCTCTTAAA GCCAC AACC GTTGC TTTTTCTTTTTTCTC udk 1486350 - 1485685 - | uridine kinase kdsA 1487188 - 1486361 - | 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase FTM_1384 1487569 - 1487219 - | hypothetical protein TERM 816 1487510 - 1487534 + g 79 -8.7 -3.89346 | opp_overlap 1487500 1487517 AATTAGTTCTTTAAC CTTTAAAGAAG CGG CTTCTGTAAAG TTTATCGGATCAACG pnp 1489656 - 1487575 - | polyribonucleotide nucleotidyltransferase TERM 817 1488731 - 1488744 + g 74 -5.3 -4.7173 | CCTTCAAGAATATTT GATCT TACA AGATC TTTTTCAATATCGTG TERM 818 1489505 - 1489515 + g 79 -5.4 -5.11613 | opp_overlap 1489496, overlap 1489497 AAAAAGTCAGTACCA TCAG CTA CTGA TTTTTTAACTACTGT rpsO 1489978 - 1489712 - | 30S ribosomal protein S15 ftsI 1491779 - 1490085 - | cell division protein, peptidoglycan synthetase (PBP) FTM_1388 1492122 - 1491772 - | hypothetical protein TERM 819 1491829 - 1491839 + g 89 -3.2 -5.93252 | TATTGTTTTACGTGT TGGC AAG GTCA TTTTTTCTTTTTGAG mraW 1493036 - 1492119 - | S-adenosyl-methyltransferase MraW FTM_1390 1495141 - 1493042 - | hypothetical protein TERM 820 1493607 - 1493629 + g 71 -6.3 -4.08958 | TTAAACTGTCCACCC GGTACCGTT AGCCC AACAGTACC TATTTTATTTGGTGA TERM 821 1494971 - 1494987 + g 77 -5.9 -4.78107 | opp_overlap 1494971 TAAAACGGTAATATA CTTATCT TCA AGGTAAG TTTTTAATGCTAATA mutM 1495235 - 1496059 + | Formamidopyrimidine-DNA glycosylase FTM_1392 1497427 - 1496888 - | glutamine amidotransferase, SNO family FTM_1393 1498293 - 1497430 - | pyridoxine/pyridoxal 5-phosphate biosynthesis protein TERM 822 1497685 - 1497697 + g 83 -6.3 -4.84359 | TGAGAAATTTGGCAC TGGTA ATT TACCA TTTTTATGCACATAC TERM 823 1497781 - 1497795 + g 72 -5.8 -4.28069 | CTTATCGGCATTTTT GATATA GTT TATATC TTTGTTAACTTGTCT gyrB 1500834 - 1498423 - | DNA gyrase, B subunit TERM 824 1499745 - 1499763 + g 73 -4.6 -4.88407 | overlap 1499742 1499739 CTTCTTTAGGGTTTT CTAAAAGA AAC TCTTGTAG TTTTTCATTAACTAA TERM 825 1499900 - 1499917 + g 74 -3.5 -5.27938 | overlap 1499900 CGCGTATCTTCACCT GTTAAAG TAAC TTTTAAC TTTTTATTTAAACCT FTM_1395 1501016 - 1501816 + | hypothetical protein FTM_1396 1501850 - 1502833 + | tRNA-dihydrouridine synthase FTM_1397 1503607 - 1502840 - | protein-disulfide isomerase TERM 826 1503025 - 1503049 + g 71 -5.7 -4.53163 | CAAACGAATGAGGTC CTTGGAAACCT ATT AGCTTACCAAG TTTTCTAGTATCTAA TERM 827 1503253 - 1503231 - G 85 -9.2 -3.90744 | opp_overlap 1503230 CCTCCTTGCAAATAA GCTTCATTAG CAA CTAGTGAAGC ATAATTAGCAACCTT TERM 828 1504220 - 1504235 + r 71 -9 -2.76322 | opp_overlap 1504215 1504220, overlap 1504217 GTTAGATAAATTTAA TGCTCC TAAA GGAGCA TCATGTGTTGGATAC TERM 829 1504235 - 1504220 - R 74 -9 -3.35695 | opp_overlap 1504220 1504217, overlap 1504215 GTTAGATAAATTTAA TGCTCC TAAA GGAGCA TCATGTGTTGGATAC FTM_1399 1506510 - 1504597 - | outer membrane protein of unknown function TERM 830 1505695 - 1505718 + g 71 -6.8 -4.19336 | overlap 1505717 ATTTATACTAGCACT GACAGATTGT GCGT AGAATCTGTC TTTATTAAGATCATT TERM 831 1506021 - 1506041 + g 70 -4.1 -4.77567 | opp_overlap 1506018, overlap 1506024 TCCAACCAGCAATTT TAACAAAAA AGT TTTTTGTAA TTTTGTTATAAAGCT sucC 1506680 - 1507843 + | succinyl-CoA synthetase beta chain sucD 1507875 - 1508747 + | succinyl-CoA ligase [ADP-forming] subunit alpha FTM_1402 1508859 - 1509284 + | hypothetical membrane protein FTM_1403 1509667 - 1510707 + | hypothetical protein FTM_1404 1512056 - 1510839 - | hypothetical protein FTM_1405 1512286 - 1513731 + | proton-dependent oligopeptide transporter (POT) family protein, di- or tripeptide:H+ symporter TERM 832 1514598 - 1514584 - g 71 -8.6 -3.11732 | opp_overlap 1514584 1514583 TTTAAAGGTAGTGAA CCAGTA TTC TACTGG ATTTGGACTGATGAT FTM_1406 1513735 - 1514655 + | asparaginase FTM_1408 1515935 - 1515432 - | hypothetical protein TERM 833 1516441 - 1516458 + G 89 -7 -5.22006 | opp_overlap 1516432 ATTACAGGCTATGGT TCGCCA TCGTGC TGGCGA TTTTTATTATGATGA cutC 1516268 - 1516990 + | copper homeostasis protein CutC family protein araJ 1518172 - 1517033 - | conserved inner membrane protein of unknown function TERM 834 1517445 - 1517423 - G 73 -4.2 -5.0133 | overlap 1517425 TAGGTTCCCAAAAAA CATTCCTAAC CCA GCTAAGAATA ATATGTATGGGATAG gph 1519246 - 1519920 + | phosphoglycolate phosphatase TERM 835 1520777 - 1520766 - f 71 -5.8 -4.48221 | GATGAATTTACAAAA GCCT TATC AGGC GCTACTAAACGAAAT trxB 1521271 - 1522221 + | thioredoxin reductase FTM_1415 1522329 - 1523495 + | major facilitator superfamily (MFS) transport protein mutL 1526395 - 1524593 - | DNA mismatch repair enzyme with ATPase activity FTM_1418 1527065 - 1526403 - | hypothetical protein TERM 836 1526876 - 1526854 - G 76 -10 -2.80816 | GGTTCATGGATTATA CCATCATCAA CGT TTGATAATGG CACATAAACTTCAGC TERM 837 1527128 - 1527113 - R 75 -4.8 -5.06089 | AAAGTATAAAGAAAA TTTGTA ATTA TACAAA CTAATTAGACGGGAC FTM_1419 1527852 - 1527133 - | hypothetical protein FTM_1420 1528006 - 1528893 + | GTPase FTM_1421 1529110 - 1529925 + | lipoprotein, putative potF 1531359 - 1530178 - | ATP-binding cassette putrescine uptake system, periplasmic protein FTM_1423 1531443 - 1532852 + | amino acid-polyamine-organocation (APC) superfamily protein TERM 838 1533104 - 1533128 + G 75 -7.3 -4.10453 | opp_overlap 1533117, overlap 1533103 1533101 1533118 GCACTAGTCATTGCG TATTTACTAGA TAC TCTTGTAAATA TTTTACAAAAATTTA perM 1532954 - 1534060 + | PerM family protein recJ 1534054 - 1535796 + | single-stranded-DNA-specific exonuclease RecJ FTM_1426 1535793 - 1536575 + | birA-like protein FTM_1427 1536572 - 1537495 + | tRNA synthetase class II (D, K and N) TERM 839 1537496 - 1537477 - T 74 -3 -5.49569 | gap 1, opp_overlap 1537477 1537492 TAGCAATATAAAAAA TCTAA-CTA TCT TAGATTAGA TTACTAATATTTATG FTM_1428 1538618 - 1537500 - | mechanosensitive ion channel protein FTM_1429 1539324 - 1538644 - | hypothetical membrane protein accC 1540773 - 1539418 - | acetyl-CoA carboxylase, biotin carboxylase subunit accB 1541311 - 1540838 - | acetyl-CoA carboxylase, biotin carboxy carrier protein subunit aroD 1541753 - 1541316 - | 3-dehydroquinate dehydratase apaH 1542584 - 1541757 - | diadenosine tetraphosphatase TERM 840 1542311 - 1542330 + g 70 -8 -3.16107 | overlap 1542310 CTTTTAGGTTTTCCG CTTTAATG ACAT CATTAAAG GTATTTTTATTATTT ksgA 1543384 - 1542596 - | dimethyladenosine transferase FTM_1435 1544795 - 1543386 - | peptidyl-prolyl cis-trans isomerase (PPIase) TERM 841 1544213 - 1544231 + g 72 -2.5 -5.28755 | overlap 1544215 CAGGCGACATTTCCC TATCAAA TTCTT TTTGATG TTTTTTAATATATTT ostA1 1547398 - 1544795 - | organic solvent tolerance protein TERM 842 1547693 - 1547681 - g 71 -3.3 -5.03747 | overlap 1547670 1547682 AAATTCGCCAAAAAA CCGCC TTT GGCAA TTGCCGAAGAGATAG TERM 843 1547848 - 1547870 + G 73 -9.2 -2.95404 | opp_overlap 1547848, overlap 1547845 1547851 ATTTGGTGTACAAAA CAACTTACCT AAT AGGAAAGTTG TGCTTGATTTTGGTG TERM 844 1547870 - 1547848 - g 93 -9.2 -4.37092 | opp_overlap 1547848 1547845 1547851 ATTTGGTGTACAAAA CAACTTACCT AAT AGGAAAGTTG TGCTTGATTTTGGTG TERM 845 1548201 - 1548191 - g 77 -5.4 -4.83759 | opp_overlap 1548191 1548189 AATGAAATGGAAAAA GCTA GAT TAGC TACTTTTGAATTACA TERM 846 1549194 - 1549184 - g 84 -5.4 -5.53991 | overlap 1549192 GAGTCATTAAAAAAA GCAA GAA TTGC ACTATGCATGGCAAC argS 1547525 - 1549270 + | arginyl-tRNA synthetase FTM_1438 1549691 - 1549311 - | hypothetical protein TERM 847 1550229 - 1550239 + r 70 -4 -4.97888 | opp_overlap 1550229 1550232, overlap 1550232 TTCAGCCACTAAAAT CTAT CAA ATAG TTTTTGAATTTTTTT TERM 848 1551249 - 1551263 + r 88 -5.8 -5.50499 | opp_overlap 1551249 ATGATAGAAATATAA CTATAA CAA TTATAG TTTTTTTAAATATCG FTM_1440 1551870 - 1551403 - | RNA methyltransferase, SpoU family hemB 1552848 - 1551874 - | delta-aminolevulinic acid dehydratase yhbY 1553134 - 1552856 - | RNA-binding protein holB 1554056 - 1553145 - | DNA polymerase III, delta prime subunit TERM 849 1553527 - 1553541 + g 75 -7.2 -4.19258 | TTTATATCATTACGC GTCATT TGT AATGAC TTTTCAATAGCATCT sohB 1555080 - 1554064 - | peptidase family S49 protein sspA 1555724 - 1555092 - | stringent starvation protein A, regulator of transcription FTM_1446 1555805 - 1556119 + | hypothetical protein TERM 850 1556258 - 1556248 - g 71 -5.4 -4.59293 | GAAATATCAAATAAA GCTT GGC AAGC ATGGTTAGCACATCA FTM_1447 1556140 - 1556403 + | hypothetical protein TERM 851 1557401 - 1557425 + G 71 -5.2 -4.62102 | gap 1, opp_overlap 1557405 1557407, overlap 1557407 1557420 GACTCAACAACTTTA TTAAT-AGCAC TCTG GTGCTTATTAA TTTTAATATTTTTCT TERM 852 1557551 - 1557535 - g 73 -3.7 -5.07971 | opp_overlap 1557533 1557535 1557538, overlap 1557528 GAAAATAATTAAAAA TAATGAC AAT GTCGTTA TGTTTAAAAAAATGC TERM 853 1557577 - 1557564 - g 74 -2.4 -5.42259 | TTATGTTTAAAAAAA TGCA TCTTAT TGCA AGTATTATATTTTTA FTM_1448 1556495 - 1558258 + | dolichyl-phosphate-mannose-protein mannosyltransferase family protein FTM_1449 1559606 - 1558650 - | glycosyltransferase TERM 854 1559135 - 1559122 - G 81 -8.1 -4.2142 | AATAGTCTAAAATAA CCTGC ATTT GCAGG AATCTTAACTCCCAT TERM 855 1559807 - 1559761 - g 72 -6.1 -4.28188 | opp_overlap 1559773 GAGTGATAATATAAA TAGTGCTATTATTAACCTCTT GGAAA AAAAGGTTATTAATGCCACTA GCTGTATGCCAAATA TERM 856 1560036 - 1560022 - g 73 -8.6 -3.31792 | opp_overlap 1560015 1560011 TGATGATGTTTATAA TGAGCT GAA AGCTCA AATAAATAACTTTAT FTM_1450 1559705 - 1560511 + | hypothetical protein ftsW 1561724 - 1560519 - | cell division protein FtsW TERM 857 1561519 - 1561505 - G 100 -7.2 -6.23317 | ATAAAAATAAAAAAA TTGCAA TAA TTGCAA AAAAACCCTGTCTGA murD 1562984 - 1561734 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase mraY 1564081 - 1562984 - | phospho-N-acetylmuramoyl-pentapeptide- transferase pckA 1565748 - 1564156 - | phosphoenolpyruvate carboxykinase glnS 1565893 - 1567539 + | glutaminyl-tRNA synthetase TERM 858 1567719 - 1567729 + T 71 -6.8 -4.0274 | opp_overlap 1567719 1567718 GTTTATGACAAACAT CCCA TCA TGGG TTCTTTACTAATAAA TERM 859 1568502 - 1568527 + T 90 -7.7 -5.18866 | opp_overlap 1568505 GTTGGTTAATGTGTA TAATGTTGCTA ACAT TAGCGGCATTA TTTTATTTATTTGAA TERM 860 1570557 - 1570544 - T 72 -6.7 -4.19506 | ATTCTAATTCTAAAA GCTCT TCCC AGAGC AAATATTTTTGCTCA yjjK 1572368 - 1570527 - | (putative) drug resistance ATPase-1 (Drug RA1) family protein TERM 861 1571320 - 1571308 - G 71 -7.7 -3.68036 | AAGCAGTTTAAAAGA GTGGT TTT ACCAC AGCCATTCTGACCGA TERM 862 1572269 - 1572283 + g 73 -8.6 -3.14991 | overlap 1572268 CATTACGACCTATTA GGCAAA TTC TTTGCC CTTTTGAGATTTCTA FTM_1459 1573628 - 1572402 - | drug:H+ antiporter-1 (DHA1) family protein FTM_1460 1574754 - 1573711 - | hypothetical protein TERM 863 1576191 - 1576179 - H 72 -2.7 -5.38321 | AAATACTATAAAAAA GCTAA GTC TTAAC CATAACAACTGTAAG FTM_1462 1576220 - 1576801 + | hypothetical protein FTM_1464 1578391 - 1577876 - | acetyltransferase FTM_1465 1579112 - 1578396 - | hypothetical protein TERM 864 1578681 - 1578701 + g 82 -8.5 -3.94634 | opp_overlap 1578680 1578677 1578676 1578681 1578683 ATCACTTAAATCAAC GATATTTAT TGT ATAAATATC TTGTTTAGCATACTC TERM 865 1579074 - 1579088 + g 76 -2.8 -5.4251 | overlap 1579075 ACTGTTATATTCACT TGCTTT TAT AAAGCC TTTTTTATATCTGGC TERM 866 1579778 - 1579788 + H 74 -5.4 -4.96468 | GCACATAACTTTTTA TCTG ACG CAGA TTTTCTTTAGATTTA rhtB 1579881 - 1580516 + | homoserine/threonine efflux family protein ppnK 1581403 - 1580513 - | NAD kinase TERM 867 1581788 - 1581774 - g 76 -2.8 -5.42975 | TTAGAGAAACAAAAA GATATC CCA GAGATC GCTATAGTTGATTTA TERM 868 1582048 - 1582036 - g 72 -4.9 -4.731 | AAGTTATGAATAAAA TTAGT GAC ACTAA ACTAACTCCTAATGC TERM 869 1582502 - 1582487 - g 71 -5.4 -4.46514 | opp_overlap 1582487 ATTTATCGAAACAAA GCACAG ACCA CTGTAC ATTATCCGTCAAGTA gtrB 1581591 - 1582535 + | glycosyl transferase FTM_1470 1583318 - 1582539 - | ATP-binding cassette (ABC) superfamily protein FTM_1471 1584250 - 1583327 - | ATP-binding cassette (ABC) superfamily protein TERM 870 1584495 - 1584484 - R 72 -4.4 -5.09245 | TTAAAATCACAAAAA GGTA TACA TACC AATGATGAAGCCAAA TERM 871 1584899 - 1584887 - R 75 -4.9 -5.17353 | AGATTTACTAAAAAA TGTAT ATA ATACA AAAGTTATCGCTGAT TERM 872 1585055 - 1585083 + r 72 -8.4 -3.36054 | opp_overlap 1585053, overlap 1585053 TTTGATAGAGAATTT CTTTTCTAAAAT TAAGC ATTTTAGAAGAG TATTCTCTAGATTTG FTM_1472 1585989 - 1585213 - | hypothetical protein FTM_1473 1587206 - 1586439 - | Mg-dependent DNase TERM 873 1586976 - 1586998 + g 83 -10.7 -3.0127 | opp_overlap 1586975 1586976, overlap 1586955 TGATCTTACTATAAT CTCATCAAC ACTTG GTTGATGAG TATCTAATTCGCTAG TERM 874 1586998 - 1586976 - G 81 -10.7 -2.64747 | opp_overlap 1586955 1586976, overlap 1586975 TGATCTTACTATAAT CTCATCAAC ACTTG GTTGATGAG TATCTAATTCGCTAG TERM 875 1589232 - 1589222 - g 85 -6.8 -5.36965 | opp_overlap 1589221 GAACATGAGAAAAAA GCTG TTT CAGC ATACTATGAACTTCT bfr 1588919 - 1589359 + | bacterioferritin TERM 876 1589941 - 1589925 - T 87 -10.9 -3.28791 | ACTCTGTTGCCAGAA CCGGATT TTG AATCCGG CGCGTCTACCAATTT FTM_1477 1590933 - 1589977 - | DNA-directed RNA polymerase, alpha subunit/40 kD subunit TERM 877 1590820 - 1590803 - G 71 -8.5 -3.05561 | ATAGAGTAAAGCATA GTTTGCT TAAG AGCAAAC CCAAGTGTATAACCT TERM 878 1592070 - 1592047 - R 93 -11.2 -3.31501 | ATCAACCGCTGATAA CTCAAAAAAC TCTA GTTTTTTGAG CTTGCAATAATTCTA TERM 879 1592442 - 1592430 - R 81 -9.1 -3.62775 | AGTATGTCGCAATAA CTGGC AAA GCCAG TTGCGAAACTATTAA ppx 1593413 - 1592487 - | exopolyphosphatase trxA1 1593611 - 1593934 + | thioredoxin TERM 880 1594878 - 1594862 - g 81 -5.9 -4.84017 | AACGCCTTACAAAAA CCAAAAA GAT TCTTTGG TGCTGCGCGTAATAC rho 1593977 - 1595239 + | transcription termination factor Rho manB 1597840 - 1596356 - | phosphomannomutase TERM 881 1597736 - 1597722 - G 70 -4.3 -4.72631 | AGGAATTGAATAAAA GCTTT TGTAT AAAGC CAACAGATCTTATCT manC 1599277 - 1597871 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase wbtM 1601474 - 1600425 - | dTDP-glucose 4,6-dehydratase wbtL 1602876 - 1601992 - | glucose-1-phosphate thymidylyltransferase wbtK 1603761 - 1602901 - | glycosyltransferase wzx 1605241 - 1603754 - | O-antigen flippase wbtJ 1605971 - 1605246 - | formyltransferase TERM 882 1605972 - 1605982 + r 71 -6.8 -4.01737 | AAATATTTTTTTCAT GAGG AAA CCTC TTTGATATTATTAAT wbtI 1607050 - 1605968 - | sugar transamine/perosamine synthetase wbtH 1608929 - 1607043 - | glutamine amidotransferase/asparagine synthase TERM 883 1608138 - 1608123 - G 74 -5.4 -4.82901 | TCCTCCGGATAAAAA TGCTCC TAGA GGAACA TCTGACTGCATTTGT TERM 884 1608469 - 1608451 - G 71 -6.8 -4.18762 | opp_overlap 1608463, overlap 1608452 1608458 1608460 1608463 AATTCTGATGCAAAA CCCAAAAT ACC ATTTTGGA TACCAAAATATAATG TERM 885 1608732 - 1608716 - G 70 -7.3 -3.86252 | opp_overlap 1608716 1608718, overlap 1608713 CTCCATTAAACACAA TAGCAGT ATT ACCGCTA TTAGATAACATTGGC wbtG 1610029 - 1608929 - | glycosyl transferase TERM 886 1609861 - 1609829 - G 72 -6 -4.40333 | gap 1, opp_overlap 1609836, overlap 1609831 1609832 1609834 TTTAAACAATACAAA TAGTACATTAAATTT ATTT AAATTTAATGTA-TA AACTTTAACACCATA TERM 887 1609859 - 1609832 - G 79 -10.2 -2.85879 | opp_overlap 1609836, overlap 1609831 1609829 1609834 AAACAATACAAATAG TACATTAAATTT ATTT AAATTTAATGTA TAAACTTTAACACCA wzy 1611255 - 1610026 - | membrane protein/O-antigen protein TERM 888 1610552 - 1610536 - G 80 -6.7 -4.67354 | AATATATATATAAAA TATTGTT ATT AACAATA TAAGTGAAGAAGTTA TERM 889 1610638 - 1610655 + g 73 -7.1 -3.97911 | AAACAGCATAAGTTT GGTAAAT ATAG ATTTACC TTTAATATATTTGAT wbtF 1612247 - 1611276 - | NAD dependent epimerase TERM 890 1611405 - 1611424 + g 74 -2.2 -5.40072 | gap 1, overlap 1611406 1611409 ATCACCCGCTCTATC TGGA-CCAA AAT TTGGCTCTA TTTTTTTACCCAAGG wbtE 1613557 - 1612247 - | UDP-glucose/GDP-mannose dehydrogenase TERM 891 1612900 - 1612910 + g 71 -5.4 -4.55118 | opp_overlap 1612899 1612900, overlap 1612899 AAGCTATATTAACAT CTCT TTG AGAG TTTTCTATAACCTTA wbtD 1614666 - 1613575 - | glycosyl transferase, group 1 TERM 892 1613648 - 1613660 + g 76 -6.3 -4.46155 | TTAGCTCTAGCTTTA TAGCT CAT AGCTA TTTTATCAGTATATG TERM 893 1614458 - 1614469 + g 70 -4.4 -4.69664 | opp_overlap 1614458 AATAAAAGAAGCAAA TCCT TAAA AGGA TTTTTGCCTCGTCTA wbtC 1615447 - 1614656 - | UDP-glucose 4-epimerase wbtB 1616081 - 1615449 - | galactosyl transferase wbtA 1617810 - 1616074 - | dTDP-glucose 4,6-dehydratase TERM 894 1617584 - 1617562 - G 75 -4.9 -4.89054 | GCCATAAAAAAATAA TGCCACTAT GAAAA ATACTGGCA AATTAATAAAAGCCT TERM 895 1617677 - 1617665 - G 74 -3.4 -5.2189 | CTAAGTAGTAAAAAA GATG ACAAG CATC TCAGCAAAACTAATG TERM 896 1617776 - 1617747 - G 72 -8.1 -3.39471 | opp_overlap 1617756, overlap 1617749 1617753 1617756 AGAAAGTCCAATTAA CAGTAATAATAGT TAAA ACTATTATTACCA CGAAATTAAGCGTTC TERM 897 1617774 - 1617749 - G 86 -10.7 -3.25941 | opp_overlap 1617756, overlap 1617747 1617753 1617756 AAAGTCCAATTAACA GTAATAATAGT TAAA ACTATTATTAC CACGAAATTAAGCGT TERM 898 1617995 - 1617967 - H 72 -8.4 -3.36054 | opp_overlap 1617965, overlap 1617965 CAAATCTAGAGAATA CTCTTCTAAAAT GCTTA ATTTTAGAAAAG AAATTCTCTATCAAA TERM 899 1618151 - 1618163 + H 75 -4.9 -5.17353 | ATCAGCGATAACTTT TGTAT TAT ATACA TTTTTTAGTAAATCT TERM 900 1618555 - 1618566 + H 72 -4.4 -5.09245 | TTTGGCTTCATCATT GGTA TGTA TACC TTTTTGTGATTTTAA TERM 901 1618814 - 1618838 + H 73 -8.7 -3.06133 | opp_overlap 1618809 1618814, overlap 1618818 ATCGTATTAATTAAA CTAAGTTAGTT GTA AACTAGCTTGG TTGAATGCAAAGTTG gdhA 1618968 - 1620317 + | glutamate dehydrogenase TERM 902 1620618 - 1620590 - T 72 -8.4 -3.36054 | opp_overlap 1620588, overlap 1620588 CAAATCTAGAGAATA CTCTTCTAAAAT GCTTA ATTTTAGAAAAG AAATTCTCTATCAAA TERM 903 1620774 - 1620786 + T 75 -4.9 -5.17353 | ATCAGCGATAACTTT TGTAT TAT ATACA TTTTTTAGTAAATCT TERM 904 1621178 - 1621189 + T 72 -4.4 -5.09245 | TTTGGCTTCATCATT GGTA TGTA TACC TTTTTGTGATTTTAA FTM_1500 1623322 - 1622357 - | hypothetical protein TERM 905 1623338 - 1623362 + r 77 -6 -4.99638 | CCATATGTAGTGTAC TTTATTTAAA TACAT TTTAAATAAA TTTTTATATAAATAT TERM 906 1623584 - 1623573 - R 72 -4.4 -5.09245 | TTAAAATCACAAAAA GGTA TACA TACC AATGATGAAGCCAAA TERM 907 1623988 - 1623976 - R 75 -4.9 -5.17353 | AGATTTACTAAAAAA TGTAT ATA ATACA AAAGTTATCGCTGAT TERM 908 1624144 - 1624172 + r 72 -8.4 -3.36054 | opp_overlap 1624142, overlap 1624142 TTTGATAGAGAATTT CTTTTCTAAAAT TAAGC ATTTTAGAAGAG TATTCTCTAGATTTG rplQ 1625583 - 1625146 - | 50S ribosomal protein L17 rpoA 1626599 - 1625628 - | DNA-directed RNA polymerase, alpha subunit rpsD 1627277 - 1626657 - | 30S ribosomal protein S4 rpsK 1627688 - 1627299 - | 30S ribosomal protein S11 rpsM 1628083 - 1627727 - | 30S ribosomal protein S13 rpmJ 1628313 - 1628200 - | 50S ribosomal protein L36 secY 1629662 - 1628337 - | preprotein translocase, subunit Y, membrane protein TERM 909 1629482 - 1629509 + g 77 -8.6 -3.53298 | gap 1, opp_overlap 1629480 1629482 1629484, overlap 1629479 1629484 AGAACATATTAAACA TACTCATCAAACC ACC GGTT-GATGAGTG TTGATTTGAAATAAT TERM 910 1629484 - 1629507 + g 75 -9 -3.33865 | gap 1, opp_overlap 1629482 1629480 1629484, overlap 1629482 1629479 AACATATTAAACATA CTCATCAAACC ACC GGTT-GATGAG TGTTGATTTGAAATA TERM 911 1629507 - 1629484 - G 75 -9 -3.34075 | gap 1, opp_overlap 1629484 1629482 1629479, overlap 1629482 1629480 AACATATTAAACATA CTCATCAAACC ACC GGTT-GATGAG TGTTGATTTGAAATA rplO 1630104 - 1629673 - | 50S ribosomal protein L15 TERM 912 1629921 - 1629911 - G 71 -5.4 -4.50058 | opp_overlap 1629911 GATGCAGAAGTAAAA CCAA ATT TTGG TAGTCTTCTTTGTAA rpmD 1630296 - 1630111 - | 50S ribosomal protein L30 rpsE 1630803 - 1630303 - | 30S ribosomal protein S5 rplR 1631184 - 1630831 - | 50S ribosomal protein L18 rplF 1631743 - 1631207 - | 50S ribosomal protein L6 TERM 913 1631557 - 1631570 + g 71 -6.7 -4.1023 | opp_overlap 1631549, overlap 1631549 TACCAGACTGTGCAA CAGCA TTTT TGCTG TTATTATTTGGCGTT rpsH 1632160 - 1631762 - | 30S ribosomal protein S8 rpsN 1632482 - 1632177 - | 30S ribosomal protein S14 TERM 914 1632427 - 1632437 + g 73 -4 -5.14985 | CTTTTTTGAGCATAT TTAG CTA CTAA TTTTTCTCTCTTTAA rplE 1633040 - 1632501 - | 50S ribosomal protein L5 rplX 1633369 - 1633052 - | 50S ribosomal protein L24 rplN 1633759 - 1633391 - | 50S ribosomal protein L14 rpsQ 1634101 - 1633850 - | 30S ribosomal protein S17 rpmC 1634314 - 1634114 - | 50S ribosomal protein L29 rplP 1634727 - 1634314 - | 50S ribosomal protein L16 rpsC 1635398 - 1634727 - | 30S ribosomal protein S3 rplV 1635748 - 1635413 - | 50S ribosomal protein L22 rpsS 1636042 - 1635764 - | 30S ribosomal protein S19 rplB 1636881 - 1636057 - | 50S ribosomal protein L2 rplW 1637202 - 1636903 - | 50S ribosomal protein L23 TERM 915 1636944 - 1636956 + g 71 -3.4 -5.10497 | opp_overlap 1636944 CATGTCCTTCAGCAA GCTT CACAT AAGC TTTTTTCCATGCCTT rplD 1637822 - 1637199 - | 50S ribosomal protein L4 rplC 1638487 - 1637855 - | 50S ribosomal protein L3 rpsJ 1638908 - 1638591 - | 30S ribosomal protein S10 fusA 1641043 - 1638929 - | translation elongation factor G TERM 916 1639519 - 1639501 - G 88 -7.4 -4.89393 | CAAATCTGACAAAAA CGTGACCA TAC TGACCACG ACCACCAGATTGACG TERM 917 1639814 - 1639824 + g 74 -3.2 -5.27923 | AGATATTACCGGCTC TGGG AAA TCCA TTTTTTCTAAGATTA rpsG 1641531 - 1641058 - | 30S ribosomal protein S7 TERM 918 1641368 - 1641348 - G 74 -6.2 -4.56775 | opp_overlap 1641362 1641364 ACGCTTTTTCAAAAA CTTCAACT TCATT AGCTGAAG CATCTTTTGCTTTAA rpsL 1641944 - 1641570 - | 30S ribosomal protein S12 pgsA 1642675 - 1642079 - | phosphatidylglycerophosphate synthetase dut 1643125 - 1642679 - | dUTP pyrophosphatase (Deoxyuridine 5'- triphosphate nucleotidohydrolase cdsA 1643929 - 1643135 - | phosphatidate cytidylyltransferase TERM 919 1643736 - 1643723 - G 77 -3.1 -5.46276 | overlap 1643724 AAGATATATAAAAAA CTGTG CAAC CACAA AAACCACTATCGTAA uppS 1644665 - 1643943 - | undecaprenyl diphosphate synthase TERM 920 1644443 - 1644431 - G 79 -4.1 -5.252 | GAGTTTTATAAAAAA GATCC ATA AGATC ACTGACTTCTTGAGC frr 1645306 - 1644749 - | ribosome recycling factor pyrH 1646084 - 1645335 - | uridylate kinase TERM 921 1646012 - 1646051 + g 82 -7.4 -4.58283 | gap 1, opp_overlap 1646022 CTGCAGATAAAGATT CTCCACTTAACTTAAGA AGAATTC TCTTAAGTTTAG-GGAG TTTTTGAGAACATTC tsf 1646957 - 1646088 - | translation elongation factor EF-Ts rpsB 1647698 - 1646979 - | 30S ribosomal protein S2 folA 1647890 - 1648432 + | dihydrofolate reductase FTM_1541 1648514 - 1649437 + | hypothetical protein TERM 922 1651592 - 1651581 - T 72 -4.4 -5.09245 | TTAAAATCACAAAAA GGTA TACA TACC AATGATGAAGCCAAA TERM 923 1651996 - 1651984 - T 75 -4.9 -5.17353 | AGATTTACTAAAAAA TGTAT ATA ATACA AAAGTTATCGCTGAT TERM 924 1652152 - 1652180 + T 72 -8.4 -3.36054 | opp_overlap 1652150, overlap 1652150 TTTGATAGAGAATTT CTTTTCTAAAAT TAAGC ATTTTAGAAGAG TATTCTCTAGATTTG FTM_1544 1653252 - 1652284 - | hypothetical protein gltX 1654658 - 1653252 - | glutamyl-tRNA synthetase fumC 1656179 - 1654788 - | fumarate hydratase, class II TERM 925 1655232 - 1655244 + g 81 -7.7 -4.43189 | opp_overlap 1655232 TCCTGGCATAATTGA TGAGC CTG GCTCA TTTTCTGGGATTAGT TERM 926 1656290 - 1656274 - H 82 -5.1 -5.3658 | opp_overlap 1656274, overlap 1656276 ACTACAAAAACAAAA TATGCTG CCA CAGCAAA ATCTATTGGTTTTTA TERM 927 1656288 - 1656276 - H 79 -7.7 -4.29117 | opp_overlap 1656274, overlap 1656274 TACAAAAACAAAATA TGCTG CCA CAGCA AAATCTATTGGTTTT nfnB 1656868 - 1657521 + | dihydropteridine reductase TERM 928 1658087 - 1658072 - g 72 -2.6 -5.36441 | gap 1 CGCCGATATAAAAAA TGGT-CT AAC AGTACCA CCTAAGCCAACCCTT FTM_1549 1657548 - 1658705 + | L-lactate dehydrogenase FTM_1550 1659037 - 1658702 - | hypothetical membrane protein FTM_1551 1661023 - 1659221 - | hypothetical protein TERM 929 1659555 - 1659567 + g 75 -4.9 -4.88795 | AAATCAACTTTGTCT TTAAC AGT GTTAA TTTCTTTTCTTAACT TERM 930 1659964 - 1659974 + g 73 -4 -5.04249 | TAGACTTATACTTAT TGAA GAA TTCA TTTATTTTTTCAAGA TERM 931 1660776 - 1660755 - G 70 -8.1 -3.18467 | opp_overlap 1660759, overlap 1660743 1660759 AAAGTTTCAATCCAA GAAACTCTA GCTA CAGAGTTTC CATCTCTACTTAAAA valS 1663811 - 1661052 - | valyl-tRNA synthetase holC 1664383 - 1663943 - | DNA polymerase III, chi subunit FTM_1554 1664896 - 1664414 - | hypothetical membrane protein pcp 1665572 - 1664904 - | pyrrolidone carboxylylate peptidase FTM_1556 1667204 - 1665579 - | hypothetical protein FTM_1557 1668027 - 1667194 - | protein of unknown function with TPR repeat region and von Willebrand factor type A domain FTM_1558 1669016 - 1668018 - | hypothetical membrane protein with von Willebrand factor type A domain TERM 932 1668368 - 1668380 + g 71 -7.7 -3.6187 | overlap 1668376 CATCAGTTTTTATTC CTTGC TGT GCAAG TTGCTTTGCTTGACT TERM 933 1668467 - 1668479 + g 76 -4.1 -5.03747 | CTCCAGCTTGCTCAA TTAGC TGT GCTGA TTTTTTGAGCGCTTT TERM 934 1668973 - 1668962 - G 73 -4.4 -4.98436 | GCAATATCACAAAAA TTCC AGCA GGAA TAATAGCCAAAAGCC FTM_1559 1670019 - 1669018 - | protein of unknown function containing a von Willebrand factor type A (vWA) domain FTM_1560 1670492 - 1670016 - | hypothetical protein TERM 935 1670427 - 1670399 - G 71 -6.7 -4.12902 | overlap 1670391 1670390 TAACTACGGCTAAAA GTAGCCACCAACC ATA AGCTAATGGCCAC CACTGAGAAACTTTC FTM_1561 1671393 - 1670482 - | hypothetical protein FTM_1562 1672362 - 1671406 - | MoxR-like ATPase FTM_1563 1672508 - 1672942 + | lipoprotein, putative pdxY 1672949 - 1673800 + | pyridoxal kinase FTM_1565 1673800 - 1674495 + | hypothetical protein TERM 936 1675601 - 1675575 - g 71 -3 -5.20216 | overlap 1675576 GAGACTATGAAAAAA CTTAAGGCTATT GCT AAAAGCCTCAAC ATAGATCTTTAATTA lpxD2 1674570 - 1675613 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase cyoE 1676606 - 1675758 - | heme O synthase cyoD 1676969 - 1676637 - | cytochrome bo terminal oxidase subunit IV TERM 937 1676810 - 1676789 - G 70 -3.7 -4.87786 | CTAACTGTACAAAAA GCTGTACTA CTGC TAATACTGC CACAGTCACACATAA TERM 938 1676892 - 1676866 - G 71 -3.1 -5.18643 | gap 1 CCAACTAAAACAAAA GCTAT-AGTAGT AATA ACTACAGATAGC ACAAAACCTTGTATA cyoC 1677573 - 1676971 - | cytochrome bo terminal oxidase subunit III TERM 939 1677360 - 1677347 - G 77 -5.3 -4.85894 | AAACCAAATATAAAA CTACT TATT AGTAG TAGCATTGTTTCAAC TERM 940 1677519 - 1677503 - G 70 -4.5 -4.73448 | opp_overlap 1677514, overlap 1677504 ATATATATCCAAAAA CCAAAAA CAT TTTTTGA ACCATCAAAATGATG cyoB 1679600 - 1677570 - | cytochrome bo terminal oxidase subunit I TERM 941 1678254 - 1678238 - G 73 -8.1 -3.62756 | overlap 1678231 1678236 ATTTGAAACCAAATA TTTTTGG AAA CCAAAAA GTAAGACCAGAAAAG cyoA 1680541 - 1679639 - | cytochrome bo terminal oxidase subunit II TERM 942 1681294 - 1681281 - g 76 -4.5 -5.03961 | opp_overlap 1681281 AACTAAAGAAGAAAA TCGCC TCAA AGCGA TGTCTTTAATAGGTA FTM_1572 1680901 - 1682268 + | major facilitator superfamily (MFS) transport protein cydA 1682722 - 1684476 + | cytochrome bd-I terminal oxidase subunit I cydB 1684487 - 1685680 + | cytochrome bd-I terminal oxidase subunit II TERM 943 1685893 - 1685916 + F 82 -9 -3.87373 | opp_overlap 1685899 AAACCGTATTTACAT TTATAACTGC TATT GCAGTTATGA TTTCTAGCGCATATG FTM_1575 1685913 - 1686611 + | polar amino acid uptake transporter TERM 944 1687120 - 1687136 + T 74 -6.5 -4.40358 | overlap 1687111 ATATCGCTATGTATT GCACCAA TAC TAGGTGC TTTTATACAATCGGT FTM_1578 1691272 - 1690304 - | hypothetical protein TERM 945 1691964 - 1691988 + G 76 -2.9 -5.49729 | opp_overlap 1691967, overlap 1691967 AAATAGAAGCTCTAG CAACACTTA AAACTAA TAAGTGTCG TTTTTTTAAGTACTT TERM 946 1692415 - 1692433 + G 82 -9.6 -3.67976 | overlap 1692401 CTTACAGGAGGTATC TCCTGCAG TAT CTGTAGGA TTTAGGATTGATGAG FTM_1579 1691462 - 1693318 + | ribonuclease II family protein FTM_1580 1693664 - 1694317 + | acarboxylesterase/phospholipase family protein hemC 1694314 - 1695216 + | hydroxymethylbilane synthase (porphobilinogen deaminase) crcB 1695217 - 1695609 + | CrcB family protein FTM_1583 1695606 - 1696013 + | hypothetical membrane protein FTM_1584 1696156 - 1696725 + | hypothetical membrane protein FTM_1585 1696895 - 1696722 - | hypothetical protein TERM 947 1697020 - 1697009 - H 74 -3 -5.40072 | GCGTTGTTAAAAAAA CAAA GAGT TTTG ACATATGAAAAGGTT FTM_1586 1697025 - 1698824 + | ABC-type anion transport system, duplicated permease component TERM 948 1699561 - 1699577 + G 74 -9.5 -3.01365 | overlap 1699560 AGGACCCTGTAGTTG CTGATCT TGT AGATCAG GTTTATCGTATGGTG FTM_1587 1698843 - 1700159 + | ABC transporter, ATP-binding protein TERM 949 1702088 - 1702104 + G 70 -3.7 -4.92385 | GGTAATGTTATATTT GGTGA GGCGTTG TCACC TTTTGTTTCAATCTG FTM_1589 1701872 - 1703758 + | monovalent cation:proton antiporter paaY 1703743 - 1704282 + | carbonic anhydrase/acetyltransferase, isoleucine patch superfamily lolB 1704233 - 1704877 + | outer membrane lipoprotein LolB TERM 950 1704898 - 1704925 + G 74 -9.4 -3.01924 | overlap 1704900 AAAAAATACTATAGT TATGCAAAGATA AATC TATTTTTGCATA TATTAAACAAACGTA ispE 1704865 - 1705692 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase FTM_1596 1707738 - 1707223 - | cytochrome b561 family protein FTM_1597 1708814 - 1707819 - | inorganic phosphate transporter (PiT) family protein FTM_1598 1709488 - 1708832 - | hypothetical protein TERM 951 1709643 - 1709655 + H 89 -3.5 -6.07627 | ATAATTATTTAAATC TTTTT CTT AAAAA TTTTTTTTTAGCAAT TERM 952 1709858 - 1709848 - g 72 -2.6 -5.35365 | AAAATAGAACAAAAA TTAT TTA ATAA TGCGAATACTCTAAA FTM_1599 1709725 - 1711269 + | acid phosphatase TERM 953 1714249 - 1714261 + T 78 -3.3 -5.60993 | opp_overlap 1714235 1714249 GCTGCTAATGCTAAA GCAGT AGA ACGGC TTTTTTTATCACCAA uspA 1716238 - 1715402 - | universal stress protein FTM_1605 1719055 - 1716314 - | DNA/RNA helicase TERM 954 1718462 - 1718481 + g 70 -4.4 -4.66987 | gap 1 TAACTGCCTTAAACT TTCAA-GTG CTT CACATTGAA TTTTATTCGGCTGTA FTM_1606 1719818 - 1719039 - | hypothetical protein FTM_1607 1720454 - 1719891 - | predicted hydrolase of the HAD superfamily TERM 955 1720099 - 1720112 + g 74 -2.4 -5.40072 | ATGATTTTATTAAGT CCAT CTGGAT ATGG TTTTTTTGCGACCCC TERM 956 1720560 - 1720580 + r 79 -5.5 -5.08824 | opp_overlap 1720559, overlap 1720564 TTTTTAAAATTATAG TTACGATAG TTT CTATCCTAA TTTTTTCACTAGGAA TERM 957 1720753 - 1720738 - R 72 -4 -5.04325 | TCTAAATGACAAAAA CTCTAA TAAC TCAGAG AAATTGACTATCAAG TERM 958 1721019 - 1721038 + r 100 -9.4 -5.0538 | opp_overlap 1721019 1721009 CTAATTCTCAATTTA GTTATAGC TTAG GCTATAAC TTTTTTGAAATCCCA TERM 959 1721038 - 1721019 - R 73 -9.4 -2.53911 | opp_overlap 1721019, overlap 1721009 CTAATTCTCAATTTA GTTATAGC TTAG GCTATAAC TTTTTTGAAATCCCA FTM_1609 1722149 - 1721277 - | SAM-dependent methyltransferase murC 1723497 - 1722142 - | UDP-N-acetylmuramate-alanine ligase FTM_1611 1724337 - 1723564 - | shikimate 5-dehydrogenase FTM_1612 1724464 - 1724922 + | hypothetical protein rpmH 1725014 - 1725148 + | 50S ribosomal protein L34 rnpA 1725138 - 1725491 + | ribonuclease P protein component FTM_1615 1725467 - 1725715 + | hypothetical protein TERM 960 1726326 - 1726302 - g 78 -2.1 -5.65678 | opp_overlap 1726316 ACAAAACATAAAAAA TACAACATCTG CAC CAGTTAATGTA ATTGTTGATGATTCA FTM_1616 1725724 - 1727379 + | hypothetical membrane protein TERM 961 1727615 - 1727602 - g 100 -6.7 -6.08342 | opp_overlap 1727602 CAAGAAATAAAAAAA CTAGC CGAT GCTAG TTATAAATCAGCTAG FTM_1617 1727386 - 1728285 + | LPS fatty acid acyltransferase FTM_1618 1728346 - 1729269 + | LPS fatty acid acyltransferase pilE 1729281 - 1729688 + | Type IV pili, pilus assembly protein TERM 962 1730187 - 1730221 + G 82 -8.6 -4.03995 | opp_overlap 1730175 1730185 1730193, overlap 1730185 ACAGGAGGCAAACCT GCAACACTATCAACTG GTG CAGTTGTTAGAGTTCC TCTTTTTGTACAAAC TERM 963 1730215 - 1730193 - g 74 -9.2 -3.0806 | opp_overlap 1730185 1730187, overlap 1730185 GGCAAACCTGCAACA CTATCAACTG GTG CAGTTGTTAG AGTTCCTCTTTTTGT efp 1729728 - 1730297 + | translation elongation factor P orn 1730300 - 1730836 + | oligoribonuclease (3'->5' exoribonuclease) TERM 964 1732388 - 1732408 + T 71 -7 -3.87815 | opp_overlap 1732387 TTGTAGTAATGATAG TCTTTTTG CTTAC CAAAAAGA TTTATAAACATCACA TERM 965 1733023 - 1733050 + T 85 -10.8 -3.12449 | overlap 1733021 1733031 TCTCTCAGCCATCCT CTTTGAGATAGT ATTT ACTATTTCAAAG TCTGTATTACTAGCA ppdK 1737145 - 1734512 - | phosphoenolpyruvate synthase/pyruvate phosphate dikinase TERM 966 1734853 - 1734837 - G 73 -8.1 -3.65902 | GTCATCTGAGTCAAA TCATTTG TAC CAAATGA GAAAAATTCACTACC TERM 967 1735260 - 1735223 - G 76 -7.8 -3.94184 | ATAGCTAATATTAAA CTCACGAGCTAGATCA TCAATC TCATCCACCTCGTGAG GTAAAAACTCATGTA TERM 968 1736180 - 1736158 - G 81 -7.8 -4.30576 | TTTGTAGCATGAAAA GCTTACCATC TTC GATAGTAAAC TCCATATCTTGCATG TERM 969 1737908 - 1737896 - R 70 -4.1 -4.89562 | TTAAAACTAATAAAA GTTGA AAG CCAAC ATAATCTTAATTTTT feoB 1740215 - 1737972 - | ferrous iron transport protein B TERM 970 1739680 - 1739701 + g 77 -5.9 -4.65895 | opp_overlap 1739680 TGTTGTGCTAACTCA GTGACTATC CTTG GATAGTAAC TTTTTAAGTCAAAAC priA 1743794 - 1741641 - | primosomal protein N' FTM_1629 1744366 - 1743791 - | nicotinamide ribonucleoside (NR) uptake permease (PnuC) family protein rbn 1745572 - 1744385 - | tRNA processing ribonuclease BN wrbA 1745579 - 1746175 + | trp repressor binding protein FTM_1632 1746186 - 1746650 + | outer membrane lipoprotein TERM 971 1747168 - 1747150 - g 78 -10.4 -2.6652 | opp_overlap 1747149 1747150, overlap 1747149 1747147 CGATAAAATCAATAG CTATTTGG TTA CCAAATAG ATTCTTCCCAGCGTT TERM 972 1747150 - 1747168 + G 78 -10.4 -2.77192 | opp_overlap 1747150 1747149 1747147, overlap 1747149 CGATAAAATCAATAG CTATTTGG TTA CCAAATAG ATTCTTCCCAGCGTT FTM_1633 1746771 - 1747994 + | major facilitator superfamily (MFS) transport protein FTM_1634 1748069 - 1748986 + | manganese/Zinc/Iron chelate uptake transporter family protein TERM 973 1749095 - 1749108 + GF 77 -3.1 -5.40474 | GTTGGTAAAAATGGT GTTGG TAAA TCAAC TTTTTTTAAGACCCT FTM_1635 1748987 - 1749664 + | ATP-binding cassette (ABC) superfamily protein FTM_1636 1749606 - 1750448 + | manganese/zinc/iron chelate uptake transporter (MZT) family protein hpt 1751803 - 1751270 - | hypoxanthine-guanine phosphoribosyltransferase purA 1753093 - 1751807 - | adenylosuccinate synthetase TERM 974 1752427 - 1752415 - G 81 -7.7 -4.29928 | AATCAACATCTAAAA GCACA CCT TGTGC ACCTTCATAAACAAC TERM 975 1753167 - 1753137 - H 71 -7.8 -3.5032 | opp_overlap 1753147, overlap 1753135 TTTTGATAGTAAATA TACTAATATATTAG CAA CTAATTTACTAGTA AAATATCGTTTAACA TERM 976 1753961 - 1753939 - g 80 -6.3 -4.73388 | overlap 1753959 AATCCTCATCAAAAA GCAGCTGTA TACTC TACAGATGC TGACTGTGTAAGCAT purH 1753270 - 1754817 + | AICAR transformylase/IMP cyclohydrolase TERM 977 1756143 - 1756132 - T 72 -4.4 -5.09245 | TTAAAATCACAAAAA GGTA TACA TACC AATGATGAAGCCAAA TERM 978 1756547 - 1756535 - T 75 -4.9 -5.17353 | AGATTTACTAAAAAA TGTAT ATA ATACA AAAGTTATCGCTGAT TERM 979 1756703 - 1756731 + T 72 -8.4 -3.36054 | opp_overlap 1756701, overlap 1756701 TTTGATAGAGAATTT CTTTTCTAAAAT TAAGC ATTTTAGAAGAG TATTCTCTAGATTTG blc 1759464 - 1758946 - | outer membrane lipoprotein blc holA 1759550 - 1760527 + | DNA polymerase III, delta subunit glnA 1760647 - 1761684 + | glutamine synthetase, catalytic domain FTM_1648 1764285 - 1764827 + | hypothetical protein lysU 1766942 - 1765212 - | lysyl-tRNA synthetase TERM 980 1766650 - 1766664 + g 89 -7.2 -5.27476 | overlap 1766641 CCATTATTTTGCTGA GCTAAA GTT TTTAGC TTTTCTTTTCTTAAA prfB 1768052 - 1767075 - | peptide chain release factor 2 dnaX 1768325 - 1769965 + | DNA polymerase III subunit gamma/tau lpxC 1770837 - 1769980 - | UDP-3-0-acyl N-acetylglucosamine deacetylase ftsZ 1772008 - 1770863 - | cell division protein FtsZ TERM 981 1771269 - 1771305 + g 73 -8 -3.64716 | gap 1, opp_overlap 1771268 1771281, overlap 1771268 ATATCTTCTAAAAGT GGGCTTGAGATAGCAGC TTCT GCAGCT-TCTCTAGCTC TATTTTCGCCACTAG ftsA 1773314 - 1772052 - | cell division protein FtsA TERM 982 1773080 - 1773061 - G 73 -8.6 -3.25111 | opp_overlap 1773059, overlap 1773059 TTAAAACCACTAATA CTAGGTGC ACTA ACACCTAG AGTAACTTCCTTAAC ftsQ 1774099 - 1773416 - | cell division protein FtsQ TERM 983 1774305 - 1774317 + r 78 -6.3 -4.7373 | opp_overlap 1774304 TTTTAGCTAATTGAC GAACT TCA AGTTC TTTTTGCTCGCATAA FTM_1657 1775452 - 1774991 - | zinc-binding protein rpsA 1775600 - 1777270 + | 30S ribosomal protein S1 TERM 984 1777302 - 1777327 + F 100 -11.3 -6.02919 | opp_overlap 1777302 CTAAACTTACTTAAA CCTATAGGCTA TTTG TAGTCTATAGG TTTTTTTATTTATAA TERM 985 1777327 - 1777302 - f 81 -9.1 -3.70076 | opp_overlap 1777302 CTAAACTTACTTAAA CCTATAGGCTA TTTG TAGTCTATAGG TTTTTTTATTTATAA FTM_1659 1777387 - 1777929 + | Sua5/YciO/YrdC family protein TERM 986 1778460 - 1778447 - g 71 -3.1 -5.06816 | opp_overlap 1778447 ATTGCTGAAGAAAAA GGTTC ATTT AAACC TATTAGAATATTAGA FTM_1660 1778027 - 1778563 + | hypothetical protein TERM 987 1778814 - 1778826 + T 70 -6.3 -4.11033 | GCGCGCATTAACTTT TAACC TTA GGTTA TTTGTAATCTTTAAT plsC 1779850 - 1778960 - | 1-acylglycerol-3-phosphate acyltransferase TERM 988 1779592 - 1779604 + g 80 -6.3 -4.75289 | opp_overlap 1779591 TGATTAAGTAAGATC CTTGA CTA TCAAG TTTTGTATTCTGCTC TERM 989 1783008 - 1782995 - g 74 -3.1 -5.3104 | TGATTAAAAATAAAA TTCCA ACTC CGGAA GGTAAACTTATTTTC TERM 990 1783133 - 1783123 - g 71 -3.2 -5.03747 | AAAGGTGTCAAAAAA GCTA ATT CAGC AGATGAGTTGCAGCA rimK 1782121 - 1783590 + | glutathione synthase/ribosomal protein S6 modification enzyme TERM 991 1784512 - 1784536 + F 77 -7.1 -4.258 | opp_overlap 1784534 TACTCTAGCTTATTA TGCTTGGAGTG ATA TGCACCAAGCA TTTATTGATGCATCA FTM_1666 1785177 - 1785959 + | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component FTM_1667 1786522 - 1785953 - | YggT family membrane protein purL 1793059 - 1789187 - | phosphoribosylformylglycinamidine synthase TERM 992 1792987 - 1793004 + g 89 -7.1 -5.31456 | CTTTATTGGATATTT TTTTAGC AGCT GCTAAAA TTTTTTCTCGCTTAA purF 1794549 - 1793059 - | amidophosphoribosyltransferase TERM 993 1793403 - 1793387 - G 75 -8.1 -3.73234 | opp_overlap 1793387 1793389, overlap 1793385 GAAGCAAGATAAACA GATTTAG CAC CTAAATC TCTAATCATCTCAAT TERM 994 1795726 - 1795740 + r 80 -10 -3.32024 | overlap 1795724 1795720 CAGCGAGACTCTATT TCCGCA GTC TGCGGA TATTCATCTTTGTCA FTM_1674 1796640 - 1795999 - | phosphopantetheinyl transferase tolC 1798178 - 1796649 - | outer membrane efflux protein, TolC TERM 995 1797509 - 1797531 + g 71 -3.4 -5.06414 | overlap 1797511 TGCCCGAATTATACT GATATTTCTG AGT CAGATATAAC TTTTTGTTCCAAGCC pcm 1798807 - 1798187 - | protein-L-isoaspartate O-methyltransferase FTM_1677 1799127 - 1800458 + | peptidase U32 family FTM_1678 1801680 - 1800499 - | drug:H+ antiporter-1 (DHA1) family protein TERM 996 1801402 - 1801390 - G 72 -4.9 -4.7373 | TGAGGCTATCAAAAA TTCTA TAT TAGAA GACAAAGCACATAAC TERM 997 1801976 - 1801987 + G 74 -2.2 -5.49568 | overlap 1801967 1801970 1801968 ATCCTTTGGCAATAG CTGC TATT GTAG TTTTTATTTTAGCTT TERM 998 1802670 - 1802685 + G 71 -7.6 -3.5764 | opp_overlap 1802669 1802670 ATTCATTCTAACAAT TGCTAC AGCA GTAGCA TTTGAACATACGCTT nhaD 1801855 - 1803282 + | Na+:H+ antiporter, NhaD TERM 999 1804523 - 1804499 - T 80 -8.8 -3.78156 | AAACACTATGAATAA TTGTCAAAAA CATAT TTTTTGACAA CATAATAAGCTGTTG FTM_1681 1806809 - 1804935 - | amino acid-polyamine-organocation (APC) superfamily protein TERM 1000 1805573 - 1805560 - G 71 -5.3 -4.56314 | opp_overlap 1805560 GCAACACAACCAAAA GCATT TATA AATGC TCTAATTCCCCAACT TERM 1001 1806658 - 1806638 - G 81 -9.7 -3.34043 | overlap 1806641 TCGAGTATTGCATAA CAGCTGCTG CTC CAGCAGTTG CCAAGACTATAAATA TERM 1002 1806655 - 1806641 - G 75 -10 -2.54 | overlap 1806638 AGTATTGCATAACAG CTGCTG CTC CAGCAG TTGCCAAGACTATAA FTM_1682 1807820 - 1806816 - | GTP-binding protein Obg/CgtA family tyrP 1809092 - 1807896 - | tyrosine permease FTM_1684 1810183 - 1809539 - | outer membrane associated protein kdpD 1813644 - 1810963 - | two component regulator, sensor histidine kinase KdpD TERM 1003 1811918 - 1811931 + g 71 -5.3 -4.53777 | TACTTAAAACTCCAT TTAGC GGCT GCTAA TTCTTTTTGATTAAA kdpC 1814302 - 1813748 - | potassium-transporting ATPase C chain kdpB 1816358 - 1814319 - | potassium-transporting ATPase B chain TERM 1004 1814954 - 1814968 + g 70 -7.2 -3.8709 | TTAATGGGTTATCCC CTGTTA TCA TAACAG TTTGTCCGCCCATTT kdpA 1818089 - 1816368 - | potassium-ATPase uptake protein, A chain TERM 1005 1817408 - 1817425 + g 73 -8.5 -3.27298 | TACCTAGTGACTTTA TAGCTTC TTGT GAAGCTA TTGGTCCTTGAGAGA TERM 1006 1818343 - 1818317 - H 72 -8.2 -3.37091 | overlap 1818312 ACTTTTAAAAGTTAA TATTTCTAACTC ACC AAGCTAGAAATA TAAAAAAAGAGCTCT TERM 1007 1819877 - 1819893 + H 73 -9.5 -2.59935 | overlap 1819876 TACAAGCTATCATCG CCAAAAC TGT GTTTTGG GTTATAAAGATATTT TERM 1008 1821019 - 1821032 + H 71 -4.5 -4.7254 | TTCATCTTACGATTT CGCAG AGTG CTGTG TTTTTGATAAACAGT TERM 1009 1822284 - 1822301 + H 74 -7.7 -3.72485 | TAAATCATGCTCCTA CTGCTTG TATG CAAGCGG TTTCAGATTCTATTT TERM 1010 1822321 - 1822333 + H 79 -7.7 -4.2354 | AGATTCTATTTCACT CCCTT TAT AAGGG TTCTTTTCACCTTTC TERM 1011 1823144 - 1823163 + H 73 -9.2 -2.65808 | opp_overlap 1823135, overlap 1823141 TAAGGAGGTGATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 1012 1825222 - 1825206 - g 79 -4.5 -5.28481 | TACTCAACTAAAAAA TACAAAG ATA CTTTATA GAAAAGGCTTGATAT TERM 1013 1827016 - 1826989 - g 77 -5 -5.07053 | AATGACTCCAAAAAA GCTTATAAATTC TTTA AAAATTATAAGC CAGAAGAAAGCTCAA pdpA2 1825027 - 1827489 + | hypothetical protein TERM 1014 1828599 - 1828609 + G 73 -4 -5.04265 | opp_overlap 1828599 CATATGACTTATCAA TGAT TAC ATCA TTTTTAATATTTTTT pdpB2 1827494 - 1830775 + | hypothetical protein FTM_1698 1830765 - 1831142 + | lipoprotein, putative TERM 1015 1831202 - 1831188 - g 75 -8.6 -3.42056 | ATTTTCAACTTAGAA GAGCAA GGC TTGCTC ATAGATATCAAAGAT FTM_1699 1831155 - 1831649 + | hypothetical protein FTM_1700 1831654 - 1833318 + | hypothetical protein FTM_1701 1833386 - 1833907 + | hypothetical protein TERM 1016 1834132 - 1834149 + G 76 -4.2 -5.14563 | opp_overlap 1834134 ACACAATGGTTACTA TATTCC GCCTCA GGAATA TTTTTTCATAGAAGA TERM 1017 1834748 - 1834730 - g 82 -7.5 -4.6038 | GAGAGTAAACTAAAA CATCATC AAAAA GATGATG CTCAAGCAATAGAAG FTM_1702 1833920 - 1835350 + | hypothetical protein FTM_1703 1835363 - 1835980 + | hypothetical protein TERM 1018 1836321 - 1836310 - gf 80 -2.2 -5.73563 | ATCAAAGCAAAAAAA CCAG CTAG CTGA AAAAGGAATAAACAA FTM_1704 1836002 - 1837153 + | hypothetical protein FTM_1705 1837119 - 1837892 + | hypothetical protein TERM 1019 1837975 - 1837957 - g 71 -7.6 -3.58518 | opp_overlap 1837956 AATATGAACTAAATA TCTATTTT GAG AAAATAGA GTTACCTAAAACAGC TERM 1020 1839855 - 1839843 - g 71 -3.4 -5.09521 | CTAACAAATGAAAAA GAAG ATGGA CTTC GAAAAGTTATGTTGA TERM 1021 1840460 - 1840449 - g 70 -2.2 -5.23292 | GGAGAGAAAATAAAA GTCG TAAA CAAC TACAATAGCTATGCT pdpC2 1837932 - 1841918 + | PdpC FTM_1707 1841936 - 1842511 + | hypothetical protein iglD2 1843714 - 1842518 - | intracellular growth locus protein D iglC2 1844364 - 1843735 - | intracellular growth locus protein C iglB2 1845901 - 1844381 - | intracellular growth locus protein B iglA2 1846469 - 1845915 - | intracellular growth locus protein A pdpD2 1850281 - 1846550 - | hypothetical protein FTM_1716 1853681 - 1854889 + | metabolite:H+ symporter (MHS) family protein aspS 1855064 - 1856842 + | aspartyl-tRNA synthetase TERM 1022 1858301 - 1858273 - T 78 -9.7 -3.13403 | opp_overlap 1858268 1858273, overlap 1858271 1858282 GCTGTTGCATTAACA TCTTACCAACTCT TGT AGAGCCGGTAAAA GTTATTTTCCTGACC pta 1861080 - 1858984 - | phosphate acetyltransferase ackA 1862244 - 1861090 - | propionate kinase 2 / acetate kinase A TERM 1023 1861183 - 1861195 + g 82 -4.1 -5.56568 | GCTGTTTATGAATGT CTCTG AAT TAGAG TTTTTTTGATGATCT ssb 1862826 - 1862350 - | single-strand DNA binding protein recX 1863452 - 1863000 - | regulatory protein RecX, inhibitor of RecA recA 1864518 - 1863439 - | recombinase A protein RecA secB1 1864989 - 1864540 - | preprotein translocase, subunit B TERM 1024 1864707 - 1864719 + g 73 -7.7 -3.7347 | ATGCTTTTTTAGCAT GCTCA ATC TGAGC TTCTTGCATGTTAGC FTM_1726 1865438 - 1865016 - | rhodanese-related sulfurtransferase TERM 1025 1865411 - 1865395 - G 71 -5.2 -4.61807 | AAAATAAAAGATAAA CAAAAC AGTAG GTTTTG TGATACAAAATAGCC FTM_1727 1866113 - 1865574 - | outer membrane protein TERM 1026 1865684 - 1865653 - G 73 -8.2 -3.70674 | gap 1, overlap 1865651 1865656 TCAGCAGGTAAAATA GCATCAAGTTGCT TCTCTTT AGCAACTTGA-GC AGAAGCCTTAGTCAA TERM 1027 1865682 - 1865656 - G 76 -9.6 -2.95081 | overlap 1865653 1865651 GCAGGTAAAATAGCA TCAAGTTGCT TCTCTTT AGCAACTTGA GCAGAAGCCTTAGTC FTM_1728 1867126 - 1866203 - | serine peptidase, S49 family TERM 1028 1868943 - 1868961 + G 77 -9.6 -3.09635 | CGGTTGGGCTACTCC TGCTGCAC TTG GTGTAGCA TTAGCTAATCCAGAT idpC 1867657 - 1869354 + | indolepyruvate decarboxylase FTM_1733 1873318 - 1871639 - | (putative) drug resistance ATPase-1 (Drug RA1) family protein TERM 1029 1872777 - 1872763 - G 83 -7.2 -4.72497 | CATCTAGTAATAAAA TATCTG GAG CAGATA ATAATAGCTTACATA FTM_1734 1873531 - 1874772 + | metabolite:H+ symporter (MHS) family protein FTM_1735 1875286 - 1875161 - | hypothetical protein FTM_1736 1875332 - 1876312 + | hypothetical protein FTM_1738 1877038 - 1877958 + | chromosome replication initiation inhibitor protein FTM_1741 1879479 - 1879799 + | hypothetical protein TERM 1030 1880453 - 1880469 + T 70 -5.9 -4.23434 | ACGCTTTCCAGCCAT CAGTATA GAT TGTACTG TTTTCGAGTATTTTA TERM 1031 1880583 - 1880569 - T 70 -6.4 -4.08216 | opp_overlap 1880569 TGATTTCGTTTAAAA CACCAA ATA CTGGTG TTTTACCTACAGCTC pepN 1883506 - 1880930 - | aminopeptidase N TERM 1032 1883540 - 1883557 + H 91 -9.9 -4.20918 | TTACTTTTATCTCTA GCATAGC AGCA GCTATGC TTTGTTGCAATTAAC FTM_1743 1883708 - 1884136 + | heat shock protein, HSP20 family trpC 1885494 - 1884133 - | indole-3-glycerol phosphate synthase (trpC); phosphoribosylanthranilate isomerase (trpF) TERM 1033 1884674 - 1884684 + g 71 -5.4 -4.60487 | opp_overlap 1884682 CCATAGACTGCTCCT GCAT CAT ATGC TTTTTGAGCATCCTC TERM 1034 1885034 - 1885050 + g 90 -8.1 -5.31877 | opp_overlap 1885034 CCCATACCTAGACGA TTAGCAA CTT TTGCTAA TTTTTTATACTCACT FTM_1745 1885999 - 1885586 - | hypothetical protein FTM_1748 1887478 - 1887137 - | hypothetical protein TERM 1035 1887173 - 1887193 + g 72 -4.7 -4.82667 | overlap 1887174 1887178 TGTAAATATACTATT TCGAAGTTG TAG CAACTTTGC TTTTTGCTCTGCTGA TERM 1036 1887174 - 1887192 + g 72 -8.2 -3.48877 | overlap 1887173 1887178 GTAAATATACTATTT CGAAGTTG TAG CAACTTTG CTTTTTGCTCTGCTG FTM_1749 1887987 - 1887547 - | hypothetical protein trpD 1889062 - 1888049 - | anthranilate phosphoribosyltransferase TERM 1037 1888442 - 1888458 + g 77 -9.5 -3.29187 | opp_overlap 1888441 1888440 AAGATTGACCAAAGT TTTTGCC ATT GGCAAAA TTAAGTCTTTTGAGT trpG 1889637 - 1889059 - | anthranilate synthase component II TERM 1038 1889443 - 1889458 + g 71 -9 -3.06183 | opp_overlap 1889439 TAGATCAACTATGCA TCCTGC ACTT GCAGGA TTACCTGGACCTGGA trpE 1891185 - 1889641 - | anthranilate synthase component I trpR 1891481 - 1891194 - | trp operon repressor rng 1893452 - 1891956 - | ribonuclease G