TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.610076 %AT, 1616747 nt, 10794 terms. Intergenic: 0.663779 %AT, H2T: 193662 nt, 1863 terms; T2T: 55221 nt, 1402 terms; H2H: 58193 nt, 920 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|162960935|ref|NC_007146.2| Haemophilus influenzae 86-028NP, complete genome (length 1914490) TERM 1 572 - 555 - g 76 -4.9 -5.15969 | gap 1 CTGCAACTCAAAAAA CTG-TGGA TGG TCCATCAG CTAAAGACTGGCGCG gapA 2 - 1021 + | glyceraldehyde-3-phosphate dehydrogenase TERM 2 1062 - 1039 - f 79 -5.2 -5.08011 | opp_overlap 1043, overlap 1043 AAAACTTTGAAAAAA TTAACCGCTC TTCA GAGCGGTTTT TTATTATCTAGAATT TERM 3 1043 - 1058 + F 100 -10.4 -5.60689 | opp_overlap 1039 1043 CTTTGAAAAAATTAA CCGCTC TTCA GAGCGG TTTTTTATTATCTAG TERM 4 1058 - 1043 - f 93 -10.4 -3.93166 | opp_overlap 1043, overlap 1039 CTTTGAAAAAATTAA CCGCTC TTCA GAGCGG TTTTTTATTATCTAG TERM 5 2066 - 2044 - g 89 -7.8 -5.14563 | GTTTTTACGAAAAAA TTTATGCAGC CGT GCTGGATAAA GTTCAAAAAGCACCA TERM 6 2818 - 2804 - g 73 -2.8 -5.22794 | AGAATTATTAAAAAA TTCTGA CAT TCTGAA AATGTTTGAGCAACG NTHI0002 1191 - 3014 + | long chain fatty acid CoA ligase TERM 7 3038 - 3021 - T 100 -11.3 -4.52781 | opp_overlap 3021 GAAGCATAACCAAAA GGCTCTC AATT GAGAGCC TTTCTTTTCTAATTA TERM 8 3021 - 3038 + T 100 -11.3 -4.82863 | opp_overlap 3021 GAAGCATAACCAAAA GGCTCTC AATT GAGAGCC TTTCTTTTCTAATTA NTHI0003 3839 - 3051 - | hypothetical protein NTHI0004 4319 - 3855 - | putative metalloprotease TERM 9 4389 - 4404 + r 70 -4.6 -4.64844 | ACATATAACAAACGG GTGGGC TTAT GACCAC TTTTGTATGTATAAA fdhD 5393 - 4581 - | formate dehydrogenase accessory protein fdxG 5664 - 8750 + | formate dehydrogenase major subunit TERM 10 9314 - 9302 - g 75 -7.7 -4.07885 | opp_overlap 9302 CAGCTTGCGTGAAAA CCTGT CCA ACAGG TGCTATTCGTTTCGG fdxH 8752 - 9690 + | formate dehydrogenase, iron-sulfur subunit TERM 11 10299 - 10283 - g 74 -5.1 -5.00616 | opp_overlap 10285, overlap 10285 CGTTGGGCGAAAAAA CACCACC CAA GATGGTA TCGTGAAGAAGTTTT fdxI 9683 - 10399 + | formate dehydrogenase, cytochrome B556 subunit TERM 12 10444 - 10423 - f 95 -8.7 -5.61881 | opp_overlap 10423, overlap 10439 CCTGAAAAAGAAAAA GTGCGGTTA AAAT TGACCGCAC TTTTTATTATAAAAG TERM 13 10423 - 10444 + F 100 -10.9 -5.18726 | opp_overlap 10423 10439 CCTGAAAAAGAAAAA GTGCGGTTA AAAT TGACCGCAC TTTTTATTATAAAAG fdhE 10469 - 11377 + | formate dehydrogenase accessory protein FdhE TERM 14 11378 - 11413 + T 100 -10.6 -4.17698 | opp_overlap 11381, overlap 11381 GCAGAAGACGCATAA AAATATAGCCTAGGAT AAAC ATCCTAGGCTATATCA TTTGTATCTATAAAT TERM 15 11410 - 11381 - T 100 -16.7 -4.91459 | opp_overlap 11381 11378 GAAGACGCATAAAAA TATAGCCTAGGAT AAAC ATCCTAGGCTATA TCATTTGTATCTATA TERM 16 11381 - 11410 + T 100 -16.7 -3.10187 | opp_overlap 11381, overlap 11378 GAAGACGCATAAAAA TATAGCCTAGGAT AAAC ATCCTAGGCTATA TCATTTGTATCTATA rimI 11861 - 11421 - | ribosomal-protein-alanine N-acetyltransferase holD 12268 - 11864 - | DNA polymerase III subunit psi rsmC 12374 - 13366 + | 16S ribosomal RNA m2G1207 methyltransferase TERM 17 13413 - 13363 - T 83 -7.9 -4.67353 | opp_overlap 13372 13378, overlap 13370 13378 GTATTCAGTGAAAAA TTAGAAACAAAAAAATCCCCATC GCAAT AATGGGGATTTTTCTATTTATTA CTTATGGATTTCACC TERM 18 13406 - 13370 - T 100 -10.4 -4.2687 | opp_overlap 13372 13378, overlap 13363 13378 GTGAAAAATTAGAAA CAAAAAAATCCCCATC GCAAT AATGGGGATTTTTCTA TTTATTACTTATGGA TERM 19 13372 - 13404 + T 73 -7.9 -3.78027 | opp_overlap 13370 13363 13378, overlap 13378 GAAAAATTAGAAACA AAAAAATCCCCAT CGCAATA ATGGGGATTTTTC TATTTATTACTTATG TERM 20 13378 - 13398 + T 89 -6.9 -5.28414 | opp_overlap 13370 13363 13378, overlap 13372 TTAGAAACAAAAAAA TCCCCAT CGCAATA ATGGGGA TTTTTCTATTTATTA TERM 21 13398 - 13378 - T 100 -7.6 -6.02919 | opp_overlap 13378 13372, overlap 13370 13363 TTAGAAACAAAAAAA TCCCCATC GCAAT AATGGGGA TTTTTCTATTTATTA era 14342 - 13434 - | GTP-binding protein Era TERM 22 13504 - 13524 + g 72 -9.1 -3.32963 | opp_overlap 13508, overlap 13498 13508 GACTTCACTTTCACC CAAAGTTCG AGG TGAACTTTG TTATCAAATAAACGT rnc 15022 - 14339 - | ribonuclease III TERM 23 14896 - 14914 + g 83 -11 -3.54784 | opp_overlap 14895 14890, overlap 14891 AATTAAGAATGGAAT CGCCTAGG AAT TCTAGGCG TTCATTATGTTGAGT lepB 16073 - 15024 - | Signal peptidase I TERM 24 15616 - 15626 + g 77 -6.8 -4.60041 | opp_overlap 15611 15609 15608, overlap 15609 AACACAATCACATCG CCAC GTT GTGG TTTTTCGCCCTCAAT TERM 25 15831 - 15816 - G 80 -6.2 -5.1167 | opp_overlap 15815 AAGTGAAGACAAAAA TTCTGA AGCC TCAGAA ATCGGTTCAATTTTG lepA 17878 - 16082 - | GTP-binding protein LepA TERM 26 17999 - 18024 + r 100 -10.5 -5.95166 | opp_overlap 18003, overlap 18003 ACTTTTAGATAAAAC AAAACCCCGAA TAAC TTCGGGGTTTC TTTTTTTTCATTCAA TERM 27 18003 - 18020 + r 100 -11.3 -5.36018 | opp_overlap 18003, overlap 17999 TTAGATAAAACAAAA CCCCGAA TAAC TTCGGGG TTTCTTTTTTTTCAT TERM 28 18020 - 18003 - R 100 -11.3 -5.23292 | opp_overlap 18003 17999 TTAGATAAAACAAAA CCCCGAA TAAC TTCGGGG TTTCTTTTTTTTCAT NTHI0022 18430 - 18047 - | autonomous glycyl radical cofactor GrcA TERM 29 18904 - 18888 - g 70 -8 -3.56092 | opp_overlap 18888 18887 TTATCACGGTGCAAA CCAAGC GCACG GCTTGG CTTTTTCAGTAAAAC TERM 30 19207 - 19192 - g 91 -3.2 -5.96219 | CACGCACAAAAAAAA GGACAA ATTA TTGACC GCACTCGTCACCTTG ung 18688 - 19347 + | uracil-DNA glycosylase TERM 31 19398 - 19367 - T 100 -11 -5.04385 | opp_overlap 19365 19370 19395, overlap 19370 TATATCTCTAAAAAA TAACCGCACTTTAA TCTC TCAAAGTGCGGTTG AATATTTCAGCATTT TERM 32 19395 - 19370 - T 100 -12.7 -4.62085 | opp_overlap 19370 19365, overlap 19367 ATCTCTAAAAAATAA CCGCACTTTAA TCTC TCAAAGTGCGG TTGAATATTTCAGCA TERM 33 19370 - 19395 + T 83 -10.5 -3.24021 | opp_overlap 19367 19370, overlap 19365 ATCTCTAAAAAATAA CCGCACTTTAA TCTC TCAAAGTGCGG TTGAATATTTCAGCA NTHI0026 20841 - 19417 - | hypothetical protein NTHI0027 22663 - 21224 - | hypothetical protein citG 24062 - 22665 - | CitXG citF 25745 - 24243 - | citrate lyase alpha chain TERM 34 25424 - 25437 + g 73 -4.5 -4.87807 | CAGAAGAATAGATTT TGGTG ACCA CGCCA TTTTTGATATATTCG citE 26635 - 25760 - | citrate lyase beta chain citD 26919 - 26632 - | citrate lyase subunit gamma TERM 35 26790 - 26808 + g 70 -6.1 -4.30844 | CACGAACTGTCGCTT CAATTTG TTCAC CAAATTG TTTTGCTACTGAGCT citC 27964 - 26957 - | [citrate [pro-3S]-lyase] ligase TERM 36 28158 - 28197 + r 89 -11 -3.57309 | gap 1, opp_overlap 28159 28163, overlap 28149 28159 28163 TTCTGAGTTGTAAAA ATAAACCGCACTTT-TGTT GCA AGCAAAAAGTGCGGTTTAA TTTAGCAGAATTTTA TERM 37 28159 - 28196 + r 95 -14.5 -2.73903 | gap 1, opp_overlap 28159 28163, overlap 28158 28149 28163 TCTGAGTTGTAAAAA TAAACCGCACTTT-TGTT GCA AGCAAAAAGTGCGGTTTA ATTTAGCAGAATTTT TERM 38 28196 - 28159 - R 100 -12.3 -4.59773 | gap 1, opp_overlap 28159 28158 28149 28163, overlap 28163 TCTGAGTTGTAAAAA TAAACCGCAC-TTTTGTT GCA AGCAAAAAGTGCGGTTTA ATTTAGCAGAATTTT TERM 39 28163 - 28192 + r 93 -10.9 -4.05788 | gap 1, opp_overlap 28163 28159, overlap 28159 28158 28149 AGTTGTAAAAATAAA CCGCACTTT-TGTT GCA AGCAAAAAGTGCGG TTTAATTTAGCAGAA TERM 40 28192 - 28163 - R 95 -8.7 -4.86385 | gap 1, opp_overlap 28159 28158 28149 28163, overlap 28159 AGTTGTAAAAATAAA CCGCAC-TTTTGTT GCA AGCAAAAAGTGCGG TTTAATTTAGCAGAA lipA 29177 - 28215 - | lipoyl synthase TERM 41 29193 - 29217 + r 77 -5.7 -4.87273 | opp_overlap 29198, overlap 29198 AGTATTTTCCTAAAT AAAAATGCCCA AAT TGGGCATTTAG TTTTTATAAAATGTT TERM 42 29212 - 29198 - R 100 -10 -5.27335 | opp_overlap 29193 29198 TTTCCTAAATAAAAA TGCCCA AAT TGGGCA TTTAGTTTTTATAAA TERM 43 29198 - 29212 + r 100 -10 -4.38116 | opp_overlap 29198, overlap 29193 TTTCCTAAATAAAAA TGCCCA AAT TGGGCA TTTAGTTTTTATAAA lipB 29869 - 29231 - | lipoyltransferase NTHI0035 30149 - 29871 - | hypothetical protein dacA 31386 - 30205 - | penicillin-binding protein 5 precursor TERM 44 31341 - 31331 - G 79 -6.8 -4.72846 | GCAGATACCGAAAAA GCAC TAA GTGC CACAAAACTTGATAA rlpA 32265 - 31402 - | RlpA-like protein TERM 45 32280 - 32317 + r 70 -8.1 -3.1944 | gap 1 TAAAATACTAACGCT TTTCATTTAT-TCTTTCT TTA AGAAAGAAAAAAATGAAA TTAGCTCCTTTTCAT mrdB 33433 - 32318 - | rod shape-determining protein mrdA 35378 - 33423 - | penicillin-binding protein 2 TERM 46 34033 - 34043 + g 75 -3.2 -5.33026 | overlap 34016 34027 CCTTGTACCCAAGGG CGTT TAT AGCG TTTTTGTTTCCATTC TERM 47 34982 - 34972 - G 70 -8.2 -3.30903 | AAAATCGGTGTATAA CGCG TTC CGCG GAGACGTTCTTTTTT NTHI0041 35867 - 35400 - | SPOUT methyltransferase superfamily protein TERM 48 35909 - 35888 - R 93 -8.7 -4.66163 | opp_overlap 35888 ATCCTTATCTAAAAA GTGCGGTTA TTTT TCACCGCAC TTTACTAATATTTAC TERM 49 35888 - 35909 + r 79 -8.7 -3.86835 | opp_overlap 35888 ATCCTTATCTAAAAA GTGCGGTTA TTTT TCACCGCAC TTTACTAATATTTAC NTHI0042 36229 - 35921 - | hypothetical protein TERM 50 36327 - 36304 - R 76 -4.5 -5.10497 | opp_overlap 36307, overlap 36307 AATCCACGCAAAAAA TAAGCGCGA AATTAA CCGCGCTTT TTATGTCTAAATTGA TERM 51 36307 - 36324 + r 79 -5.5 -5.04597 | opp_overlap 36304 36307 CCACGCAAAAAATAA GCGCG AAATTAAC CGCGC TTTTTATGTCTAAAT TERM 52 36324 - 36307 - R 74 -6.2 -4.64763 | opp_overlap 36307, overlap 36304 CCACGCAAAAAATAA GCGCGA AATTAA CCGCGC TTTTTATGTCTAAAT NTHI0043 38009 - 36354 - | hypothetical protein TERM 53 36451 - 36440 - G 70 -5.8 -4.31433 | opp_overlap 36439 CAGTGGCATAAGAAA GTGC TGCA GCAC CGTTATCTTCTTTAA TERM 54 38171 - 38192 + H 89 -8.7 -4.54047 | opp_overlap 38171 ACCCTTTTACAAAAA GTGCGGTTA TTTT TCACCGCAC TTTTATCTCGGATGG TERM 55 38192 - 38171 - H 93 -8.7 -4.83169 | opp_overlap 38171 ACCCTTTTACAAAAA GTGCGGTTA TTTT TCACCGCAC TTTTATCTCGGATGG NTHI0044 38215 - 39993 + | ABC transporter ATP-binding protein TERM 56 40061 - 40071 + G 78 -5.4 -5.08086 | AATTTTTTGTATGTT TGAC AAA GTCA TTTTCTATTTTTTGT mreB 40042 - 41178 + | rod shape-determining protein MreB TERM 57 41187 - 41229 + F 95 -8.7 -5.63103 | gap 1, opp_overlap 41197, overlap 41192 41197 AATTTAATTAGAATA TGAA-CAAAAAGTGCGGTTA AAAA TAACCGCACTTTTCCTTTCA TTTTTTTCATTCAAC TERM 58 41192 - 41223 + F 91 -13.2 -3.29495 | opp_overlap 41197, overlap 41187 41197 AATTAGAATATGAAC AAAAAGTGCGGTTA AAAA TAACCGCACTTTTC CTTTCATTTTTTTCA TERM 59 41197 - 41218 + F 100 -13.1 -4.65819 | opp_overlap 41197, overlap 41192 41187 GAATATGAACAAAAA GTGCGGTTA AAAA TAACCGCAC TTTTCCTTTCATTTT TERM 60 41218 - 41197 - f 100 -13.1 -5.19251 | opp_overlap 41197 41192 41187 GAATATGAACAAAAA GTGCGGTTA AAAA TAACCGCAC TTTTCCTTTCATTTT TERM 61 41379 - 41369 - g 71 -6.8 -4.0802 | AGCTCAATAACGAAA GCAC GTA GTGC AATGGAAACAGCAAT TERM 62 42275 - 42251 - g 70 -8.7 -3.08934 | opp_overlap 42253, overlap 42253 42265 42266 CCAGATATTCCAACA GATTTTCTTCA AAA TGAAGAAGATC TTCCCATAGAACAGC mreC 41258 - 42313 + | rod shape-determining protein MreC mreD 42313 - 42801 + | rod shape-determining protein MreD TERM 63 42830 - 42796 - T 83 -11.1 -3.02807 | gap 1, opp_overlap 42799 42806, overlap 42798 42806 AGAAAAGTTAAATTA CATTAAAAAAGAGAGA TAAC TCTCTCTTTTTT-ATG ATTTATGAATGTTTC TERM 64 42829 - 42798 - T 80 -10.4 -3.05455 | opp_overlap 42799 42806, overlap 42796 42806 AAAAGTTAAATTACA TTAAAAAAGAGAGA TAAC TCTCTCTTTTTTAT GATTTATGAATGTTT TERM 65 42799 - 42828 + T 90 -13.9 -3.0386 | opp_overlap 42798 42796 42806, overlap 42806 AAAGTTAAATTACAT TAAAAAAGAGAGA TAAC TCTCTCTTTTTTA TGATTTATGAATGTT TERM 66 42821 - 42806 - T 89 -7.6 -5.2422 | opp_overlap 42799 42806, overlap 42798 42796 AATTACATTAAAAAA GAGAGA TAAC TCTCTC TTTTTTATGATTTAT TERM 67 42806 - 42821 + T 93 -7.6 -5.43621 | opp_overlap 42806 42798 42796, overlap 42799 AATTACATTAAAAAA GAGAGA TAAC TCTCTC TTTTTTATGATTTAT NTHI0048 43628 - 42852 - | hypothetical protein xthA 44441 - 43638 - | exonuclease III rluA2 45163 - 44489 - | putative pseudouridine synthase NTHI0051 46227 - 45163 - | hypothetical protein TERM 68 45602 - 45588 - G 74 -10 -2.83747 | opp_overlap 45587 45585, overlap 45585 45590 TAATCGCGACAATCA CAGCTG ATT CAGCTG CCATTTTACTAATCA TERM 69 46147 - 46161 + g 70 -7.2 -3.8186 | TTCATCTAGCTTTGC TTCCAT ATT ATGGAA TTCTTGCTTGGGCTG TERM 70 46267 - 46244 - R 100 -11.8 -5.0538 | GCCTATTCCAAAAAA TAACCCCACT AAAT AGTGGGGTCA TAAAGTCAAAATTCA NTHI0052 46949 - 46287 - | FtsH-interacting integral membrane protein TERM 71 46888 - 46876 - G 73 -4.1 -5.16237 | opp_overlap 46879 46880 46881, overlap 46879 AATCCCAGTAAAAAA TACGT GTT ACGCA ACACTTTATGTGTGC TERM 72 47257 - 47234 - R 100 -9.6 -4.37199 | opp_overlap 47234 ATCAGAATTAAGAAA TCCCTAAGTC ACAC GGCTTAGGGA TTTTTACTTTGTATT TERM 73 47234 - 47257 + r 100 -11.8 -5.08367 | opp_overlap 47234 ATCAGAATTAAGAAA TCCCTAAGTC ACAC GGCTTAGGGA TTTTTACTTTGTATT NTHI0053 47830 - 47276 - | hypothetical protein TERM 74 47586 - 47600 + g 73 -2.8 -5.28983 | GATGCTTTTATCGCA TCAATC ATC GACTGA TTTTTCTCTTTTGCA TERM 75 47877 - 47858 - H 70 -4.3 -4.79667 | AAAATTTATCAAAAA CTTTCAC GCTTTG GCGAAAG ACATCTTTTTGCTAT phnA 47897 - 48259 + | PhnA-like protein TERM 76 48288 - 48269 - T 100 -10 -5.15969 | opp_overlap 48269 48268, overlap 48270 48285 GCTTAATCGAAAAAA CGCGGTCT AAAT AGACCGCA CTTTGCACTTTAAAG TERM 77 48287 - 48270 - T 90 -11.3 -3.68859 | opp_overlap 48269 48268, overlap 48269 48285 CTTAATCGAAAAAAC GCGGTCT AAAT AGACCGC ACTTTGCACTTTAAA eda 48950 - 48312 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase uxuC 50362 - 48959 - | glucuronate isomerase TERM 78 49989 - 50003 + g 76 -10 -3.0792 | opp_overlap 49984 TGATGCCAAATTTTT TCCGCA TTT TGCGGA TTAAATAACATATTG NTHI0057 51229 - 50372 - | D-mannonate oxidoreductase NTHI0060 53463 - 52192 - | putative TRAP-type C4-dicarboxylate transport system, large permease component TERM 79 52252 - 52237 - G 70 -2.6 -5.16237 | AATTTCAGGAAAAAA TACGAT CAAC ATCATA ATAATTGCGTACACA TERM 80 52476 - 52458 - G 75 -4.6 -5.09204 | AGACTGGAACAAAAA TTAATACC GCA GGAATTAA ATCCATTACACATCC TERM 81 52834 - 52819 - G 70 -6.2 -4.27796 | TAATAAAGGCCAAAA TGCTTT TTTA AAAGCA ACCCATCTTTCTTTG NTHI0061 53970 - 53473 - | putative TRAP-type C4-dicarboxylate transport system, small permease component TERM 82 53961 - 54001 + g 72 -6.9 -3.93237 | overlap 53963 AACAAGCTCCTTCTT TATCCCCCATGAGCAATTT ATA AAATTGAACATAGGGGATC TTATTAATTATTTAG TERM 83 53963 - 53999 + g 77 -9.5 -3.53745 | overlap 53961 CAAGCTCCTTCTTTA TCCCCCATGAGCAATTT ATA AAATTGAACATAGGGGA TCTTATTAATTATTT NTHI0062 54995 - 54009 - | putative TRAP-type C4-dicarboxylate transport system, periplasmic component TERM 84 54250 - 54268 + g 77 -6.8 -4.652 | overlap 54251 ATAATTTGATCTTCT TTTGGAAT TTT ATTCCAAG TTTTTAAGCTAATTT TERM 85 54251 - 54267 + g 70 -8.1 -3.38036 | overlap 54250 TAATTTGATCTTCTT TTGGAAT TTT ATTCCAA GTTTTTAAGCTAATT TERM 86 54624 - 54641 + g 71 -3.5 -5.09173 | gap 1, overlap 54624 54626 ACCAATTTTATTTGC G-ATTGGA GAT TCCAATAC TTTTTTAGCCTCTTG NTHI0063 56050 - 55022 - | hypothetical protein TERM 87 55749 - 55731 - G 81 -10.4 -3.39595 | overlap 55734 TTTAATGATTCACAA CAATTGGT TCT ACCAATTG AACAAGGATAGCATT TERM 88 56189 - 56144 - H 71 -8.6 -3.01791 | opp_overlap 56135 56133 56186, overlap 56149 56151 56186 ACTCTTTTTGGAATA CCAAATATCTATTTTTGTGA GCCGTA TCACAAAAATAAAAAATTGG AATACCAATTTAAGG TERM 89 56182 - 56151 - H 73 -8.3 -3.55084 | overlap 56149 56144 TTGGAATACCAAATA TCTATTTTTGTGA GCCGTA TCACAAAAATAAA AAATTGGAATACCAA TERM 90 56197 - 56186 - g 93 -4.4 -5.98675 | opp_overlap 56186, overlap 56144 CACAAAAATAAAAAA TTGG AATA CCAA TTTAAGGAAAAATAT uxuR 56160 - 56960 + | uxu operon regulator TERM 91 58106 - 58078 - g 78 -3.1 -5.47821 | gap 1, opp_overlap 58085 ACTTACGTAAAAAAA CCAACC-CTGGC TACTCT GCCATTGGTCGG TTAAAAGGTCTAGCT uxuA 56988 - 58172 + | mannonate dehydratase TERM 92 58217 - 58181 - T 100 -11.9 -5.54338 | gap 1, opp_overlap 58177 58176 TAAGTAAAAGAAAAA GTGCGGTC-ATAAAAA ACATTA TTTTTATCGACCGCAC TTCCAATTTATTTTA NTHI0066 58938 - 58225 - | putative membrane protein TerC TERM 93 58982 - 58965 - R 81 -9.9 -3.46302 | opp_overlap 58962, overlap 58963 TAATAGAGTTAAATA GATCCGA AAGT TCGGATC ATAATGACTTTATGA uvrC 60865 - 59036 - | excinuclease ABC subunit C TERM 94 60823 - 60787 - G 83 -8.9 -4.21773 | opp_overlap 60787 TCCCAACATAAATAA CCTGATCTTTATCGT CATACAT ACGATAAACACCAGG TTCGTGAGAGACATC kdsB 61631 - 60867 - | 3-deoxy-manno-octulosonate cytidylyltransferase lpxK 62700 - 61702 - | tetraacyldisaccharide 4'-kinase TERM 95 62005 - 61982 - G 79 -2.4 -5.62219 | gap 1, overlap 61983 AACATAGTAAAAAAA CGCTGTGGATT GCC AATCC-CTGCA ATGGCAACACCAGAT TERM 96 62757 - 62732 - R 100 -10.5 -4.386 | opp_overlap 62735, overlap 62735 TAAGTGCGGATAAAA TAACGCGAGTT TTTC AACTCGCGTTT TCAATAATTAATAAA TERM 97 62754 - 62735 - R 100 -12.2 -4.30995 | opp_overlap 62735, overlap 62732 GTGCGGATAAAATAA CGCGAGTT TTTC AACTCGCG TTTTCAATAATTAAT TERM 98 62735 - 62754 + r 100 -12.2 -4.24294 | opp_overlap 62732 62735 GTGCGGATAAAATAA CGCGAGTT TTTC AACTCGCG TTTTCAATAATTAAT msbA 64536 - 62773 - | lipid transporter ATP-binding/permease protein rec2 66943 - 64577 - | recombination protein 2 dksA 67202 - 67639 + | DnaK suppressor protein TERM 99 67690 - 67659 - f 82 -8.8 -3.94812 | opp_overlap 67664, overlap 67664 TTCTATTGAAAAATA CAAAAGTGCGGTTA AAAT TAGCCGCACTTTTT TGCATTTAAAAATGC TERM 100 67664 - 67685 + F 100 -10.9 -5.22039 | opp_overlap 67664 67659 TTGAAAAATACAAAA GTGCGGTTA AAAT TAGCCGCAC TTTTTTGCATTTAAA TERM 101 67685 - 67664 - f 95 -8.7 -4.98672 | opp_overlap 67664, overlap 67659 TTGAAAAATACAAAA GTGCGGTTA AAAT TAGCCGCAC TTTTTTGCATTTAAA pcnB 67887 - 69245 + | poly polymerase folK 69254 - 69736 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 102 69778 - 69740 - f 93 -10.4 -3.91072 | overlap 69741 TTAAATCCCTAGAAA TTTCACCGCACTTTTATG AAC CTCAAAAGTGCGGTAGAA TCAGCCCACATTTTT TERM 103 69778 - 69741 - f 83 -11.5 -2.94161 | gap 1, overlap 69740 TAAATCCCTAGAAAT TTC-ACCGCACTTTTATG AAC CTCAAAAGTGCGGTAGAA TCAGCCCACATTTTT NTHI0078 69812 - 70288 + | hypothetical protein amiB 70296 - 71594 + | N-acetylmuramoyl-L-alanine amidase AmiB precursor TERM 104 73286 - 73275 - g 79 -5.8 -4.97402 | CAAAATCTACAAAAA TGCC TGAT GGCA ATGCTGACTAGAGAT mutL 71595 - 73484 + | DNA mismatch repair protein TERM 105 73901 - 73879 - g 89 -7.6 -5.07486 | opp_overlap 73878 GAGCTTGAACAAAAA GCAGCTCAAC AAG GTTGGGCAGC ATTGCATACAGAACT miaA 73492 - 74427 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 106 74476 - 74495 + G 83 -10.8 -3.64488 | overlap 74474 AAAAATTACAATCTC TTGGCACA ATCC TGTGCCAA TCTTTTCCAGAGCTT glnE 74433 - 77378 + | glutamate-ammonia-ligase adenylyltransferase recN 79139 - 77463 - | DNA repair protein RecN TERM 107 78127 - 78140 + g 74 -5.2 -4.90477 | opp_overlap 78127 GAAAAATCCAAAAGT GCGG TTAATT CCGC TTTTAATTTTTTGTG ppnK 80069 - 79251 - | inorganic polyphosphate/ATP-NAD kinase grpE 80133 - 80837 + | hypothetical protein TERM 108 80858 - 80875 + T 100 -9.1 -5.95286 | opp_overlap 80858 80857 80855 ATTTTGTCTAAAGAG CGGTCGG TTTT TCGACCG TTTTTTCTTTTTCCT NTHI0086 81194 - 80850 - | hypothetical protein TERM 109 81038 - 81022 - G 73 -3.7 -5.1101 | TCACGAGCTAAAAAA TCTAAAG GCT CCTCAGA GATAATCGCAAGGTC NTHI0087 81627 - 81187 - | hypothetical protein TERM 110 82002 - 81989 - g 73 -3.7 -5.16237 | overlap 81990 AATGCCATTAAAAAA GCCGC AAGT GCGGT CAATATTTCCGATGA TERM 111 83709 - 83721 + G 83 -6.9 -4.93877 | overlap 83710 TGTCATATCCCCCAC TCGCC AGC GGCGG TTTTATTTGCTACGG TERM 112 83710 - 83720 + G 73 -8.2 -3.55603 | overlap 83709 GTCATATCCCCCACT CGCC AGC GGCG GTTTTATTTGCTACG nrdD 81908 - 84031 + | anaerobic ribonucleoside triphosphate reductase TERM 113 84050 - 84071 + F 100 -13.1 -5.06816 | opp_overlap 84050 AACTCCCTAGCAAAA GCACGCATT TTTT AATGCGTGC TTTTTGTTACCAACT TERM 114 84071 - 84050 - f 100 -13.1 -4.25848 | opp_overlap 84050 AACTCCCTAGCAAAA GCACGCATT TTTT AATGCGTGC TTTTTGTTACCAACT TERM 115 84591 - 84567 - g 74 -4.9 -4.85599 | GTGATGCTACAAAAA GTGGCTCAAAC CTT GCCAGAACCAC TCAATGAAAAATTTG tesB 84150 - 85010 + | Acyl-CoA thioesterase II TERM 116 85110 - 85140 + T 74 -5.6 -4.74801 | opp_overlap 85110 ATGAAAAAATAAAAA GACTAAGTTC TATTACATTCT GAACTTAGTC TTTTTAATGAAATTA TERM 117 85140 - 85110 - T 91 -5.6 -5.77571 | opp_overlap 85110 ATGAAAAAATAAAAA GACTAAGTTC TATTACATTCT GAACTTAGTC TTTTTAATGAAATTA cysS 86550 - 85171 - | cysteinyl-tRNA synthetase ppiB 86653 - 87162 + | peptidyl-prolyl cis-trans isomerase B NTHI0093 87166 - 87597 + | hypothetical protein TERM 118 87684 - 87709 + F 100 -14.9 -5.28826 | opp_overlap 87684 CCATTGAGCGATGAA TCCCCTGATTA GCGA TAATCAGGGGA TTTTTTATAGAATTT TERM 119 87709 - 87684 - f 95 -14.9 -3.18912 | opp_overlap 87684 CCATTGAGCGATGAA TCCCCTGATTA GCGA TAATCAGGGGA TTTTTTATAGAATTT NTHI0095 87739 - 88527 + | putative deoxyribonuclease NTHI0096 88589 - 88846 + | hypothetical protein NTHI0097 88857 - 89132 + | hypothetical protein TERM 120 89121 - 89139 + T 83 -10.3 -3.22102 | opp_overlap 89121, overlap 89119 TTTCAGACAAAAAAA TTGCCCC ATTAA GGGGCAA TCTTATCAACGCTCT TERM 121 89139 - 89121 - T 100 -10.3 -5.71712 | opp_overlap 89121 89119 TTTCAGACAAAAAAA TTGCCCC ATTAA GGGGCAA TCTTATCAACGCTCT trxA 89505 - 89182 - | thioredoxin ddh 90620 - 89625 - | D-lactate dehydrogenase metB 91778 - 90633 - | cystathionine gamma-synthase TERM 122 92031 - 92015 - H 81 -10.9 -2.62616 | opp_overlap 92030 TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 123 92217 - 92197 - H 79 -10.5 -2.89742 | opp_overlap 92196, overlap 92200 92212 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CCTTTCGAGGCGTGC TERM 124 92214 - 92200 - H 77 -8.6 -3.5947 | opp_overlap 92196, overlap 92197 92212 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCCTTTCGAGGCG TERM 125 92809 - 92825 + G 77 -8.1 -3.92075 | opp_overlap 92809 CTATTCTTCCACACA TTCTTTC TGC GAAAGAA TTTATCCGTGGAACT NTHI0101 92334 - 93170 + | ATPase involved in chromosome partitioning TERM 126 93402 - 93391 - g 84 -4.4 -5.56264 | TTCAAAGATAAAAAA CTGA TTGA TCAG ATAGGGGGATTAGCA dnaB2 93172 - 94527 + | replicative DNA helicase NTHI0103 94520 - 96220 + | hypothetical protein NTHI0104 96220 - 96771 + | hypothetical protein TERM 127 96818 - 96776 - f 100 -9.2 -5.05782 | opp_overlap 96776 96778 96781, overlap 96778 ATGCAGCTTAAAAAA CATAACGCCCAACCTAGTGC GTT ACGTTAAGTTGGGCGTTATT CATATCGTTAGTAAG TERM 128 96816 - 96778 - f 100 -11.8 -4.15748 | opp_overlap 96776 96778 96781, overlap 96776 GCAGCTTAAAAAACA TAACGCCCAACCTAGTGC GTT ACGTTAAGTTGGGCGTTA TTCATATCGTTAGTA TERM 129 96778 - 96816 + F 91 -13.3 -3.33361 | opp_overlap 96778 96776, overlap 96776 96781 GCAGCTTAAAAAACA TAACGCCCAACCTAGTG CGTTA CGTTAAGTTGGGCGTTA TTCATATCGTTAGTA TERM 130 96781 - 96813 + F 87 -10.6 -3.79849 | opp_overlap 96778 96776, overlap 96776 96778 GCTTAAAAAACATAA CGCCCAACCTAGTG CGTTA CGTTAAGTTGGGCG TTATTCATATCGTTA TERM 131 96906 - 96894 - f 72 -2.7 -5.29445 | opp_overlap 96901, overlap 96899 96901 TTGCAACAATAAAAA TGAAA TAT TCTCA GAGAGAATTAAATTA TERM 132 96939 - 96953 + G 76 -5.7 -5.00616 | opp_overlap 96939 GAAACAAAATTACAA GAGCA TGGGT TGCTC TTTTTTGGCAACCAG TERM 133 97541 - 97511 - g 72 -5.5 -4.68384 | overlap 97512 97515 ATTTATTCAAGAAAA CTTACTAAGTTCC AATAA GGAACTCAGTGAA AAAACAGGGGAACTC TERM 134 97591 - 97569 - g 71 -9.2 -2.56601 | overlap 97568 97565 97582 CTCAGTAAAAATCAC CTTAGTTCCA AAA TGGAACTCAG TAAAATCAAGCAGAG NTHI0106 96921 - 98144 + | hypothetical protein TERM 135 98301 - 98269 - f 84 -6.3 -5.12068 | overlap 98273 98274 CACAGTGAACAAAAA TTAACCACTGTGCTA GGG TTGCACAGTGAACAA AAATTAACCACTGTG TERM 136 98297 - 98273 - f 85 -9.3 -3.9407 | overlap 98269 98274 GTGAACAAAAATTAA CCACTGTGCTA GGG TTGCACAGTGA ACAAAAATTAACCAC TERM 137 98296 - 98274 - f 79 -10.6 -2.95358 | overlap 98273 98269 TGAACAAAAATTAAC CACTGTGCTA GGG TTGCACAGTG AACAAAAATTAACCA TERM 138 98337 - 98305 - f 84 -6.3 -5.12068 | overlap 98309 98310 CACAGTGAACAAAAA TTAACCACTGTGCTA GGG TTGCACAGTGAACAA AAATTAACCACTGTG TERM 139 98333 - 98309 - f 85 -9.3 -3.9407 | overlap 98305 98310 GTGAACAAAAATTAA CCACTGTGCTA GGG TTGCACAGTGA ACAAAAATTAACCAC TERM 140 98332 - 98310 - f 79 -10.6 -2.95358 | overlap 98309 98305 TGAACAAAAATTAAC CACTGTGCTA GGG TTGCACAGTG AACAAAAATTAACCA TERM 141 98373 - 98341 - f 84 -6.3 -5.12068 | overlap 98345 98346 CACAGTGAACAAAAA TTAACCACTGTGCTA GGG TTGCACAGTGAACAA AAATTAACCACTGTC TERM 142 98369 - 98345 - f 85 -9.3 -3.9407 | overlap 98341 98346 GTGAACAAAAATTAA CCACTGTGCTA GGG TTGCACAGTGA ACAAAAATTAACCAC TERM 143 98368 - 98346 - f 79 -10.6 -2.95358 | overlap 98345 98341 TGAACAAAAATTAAC CACTGTGCTA GGG TTGCACAGTG AACAAAAATTAACCA TERM 144 98402 - 98384 - f 77 -9.6 -3.0089 | overlap 98381 AACAAAAATTAACCA CTGTCCAG GGG CTGGACAA AGTACAAATTTTAAC TERM 145 98632 - 98670 + G 75 -7.6 -4.07687 | opp_overlap 98619 AATTCAGCAAGCTGC CGAACAAGATGATCCTTA TGC TGATGATTATCTTCTTCG TTTTGAACAAAAAGT NTHI0107 98441 - 99196 + | hypothetical protein NTHI0108 99196 - 99684 + | hypothetical protein TERM 146 99794 - 99772 - f 100 -13.5 -3.55203 | opp_overlap 99777 AAAAGGCCTTTTAAA GGTAAGGGG ACAAG CCCCTTACC TTAACGAAAAAAAGC ssb2 99930 - 100352 + | single-strand DNA-binding protein NTHI0110 100379 - 100897 + | putative lipoprotein TERM 147 100946 - 100964 + T 100 -7.4 -5.95539 | ACCTCATTCTCCTTT GCCCCA ACCTTAG TGGGGC TTTTTTTATTTCAGG TERM 148 101103 - 101124 + T 100 -13.1 -4.95758 | opp_overlap 101100 AATATCTCAAACGTT TACCCCTTG GCTA CAAGGGGTA TTTTTCTCCTGTAAT NTHI0111 101670 - 101113 - | hypothetical protein TERM 149 101165 - 101153 - G 70 -2.7 -5.05153 | ATTGCAAAAAATAAA TTAAG TGG CTCAA AATGAAGTGAAGATA TERM 150 103433 - 103381 - g 73 -4.4 -4.85782 | opp_overlap 103393 TTCTTGAAAAAGAAA GGTAAATCA-CTATTAGCGACAGATG AAG CAA-TGACGCTAATTGATAATTTACC TCAGATGTTAAAAGA topB2 101746 - 103806 + | DNA topoisomerase III TERM 151 104035 - 104090 + F 100 -20.2 -3.42182 | overlap 104060 104083 CTTTTCAAATCGCTG GCCATTGCGGATTTTTAAAGTGTATT GCAA AGTGCATTTTGAAAATTCGCAATGGC TTGCTACTTTTTCCT TERM 152 104308 - 104331 + F 100 -9.6 -5.10933 | opp_overlap 104308 104293 TAGTCAAAACTATAA GGTCATTCAG GAAA CTGGGTGACC TTTTCTTTTGACTAA TERM 153 104550 - 104534 - f 72 -9.5 -2.76483 | overlap 104533 CACTGAAAGGAGAAT CTACGAA TAA TTCGTAG GTGTGCCACCTTAAA TERM 154 104623 - 104665 + F 100 -10.1 -5.2189 | gap 2 ACAATTTAACCCTTG GCGG-GAAACATTTTT-CCCG TGT TGGGTAAGGATGTTTCTCCGC TTTTTTACTACTTAG NTHI0113 104691 - 105119 + | hypothetical protein TERM 155 105137 - 105158 + G 100 -8.8 -5.28942 | opp_overlap 105137 TATAAACTGATGAAA GCCAACAA CAAAAT TTGTTGGC TTTTTCTTTACCCTG TERM 156 105158 - 105137 - g 76 -8.8 -3.83169 | opp_overlap 105137 TATAAACTGATGAAA GCCAACAA CAAAAT TTGTTGGC TTTTTCTTTACCCTG TERM 157 105166 - 105198 + G 83 -9.1 -4.33146 | opp_overlap 105183, overlap 105167 105169 105176 TTGTTGGCTTTTTCT TTACCCTGAAGGGGA AAC TCCCCTTATGGGTGG TTTCTCCTTTTTTAT TERM 158 105167 - 105197 + G 78 -10.4 -3.17447 | opp_overlap 105183, overlap 105166 105169 105176 TGTTGGCTTTTTCTT TACCCTGAAGGGGA AAC TCCCCTTATGGGTG GTTTCTCCTTTTTTA TERM 159 105169 - 105195 + G 80 -10.8 -3.11517 | opp_overlap 105183, overlap 105167 105166 105176 TTGGCTTTTTCTTTA CCCTGAAGGGGA AAC TCCCCTTATGGG TGGTTTCTCCTTTTT TERM 160 105176 - 105205 + G 100 -10.7 -5.7827 | opp_overlap 105183, overlap 105169 105167 105166 TTTCTTTACCCTGAA GGGGAAACTCCCC TTAT GGGTGGTTTCTCC TTTTTTATTTCTATT NTHI0114 105131 - 105223 + | hypothetical protein TERM 161 105466 - 105444 - g 73 -2.6 -5.18726 | CGTGCAGAACAAAAA GCTGAGCGTT ATC AAAACGCAGC TAATAATGCATTAAA NTHI0115 105234 - 105875 + | hypothetical protein NTHI0116 105910 - 106317 + | hypothetical protein TERM 162 106359 - 106390 + F 83 -10.2 -3.20387 | overlap 106366 106387 CATTCTTTTCGCACC TTACCCATAGGGGA TATA TCCCTTATGGGCGA TATTCCCTATTTTAG TERM 163 106366 - 106399 + F 82 -8.9 -4.08394 | overlap 106359 106387 TTCGCACCTTACCCA TAGGGGATATATCCC TTAT GGGCGATATTCCCTA TTTTAGAAGGAATAT radC2 106418 - 106888 + | putative DNA repair radC-like protein TERM 164 106910 - 106942 + F 100 -11.3 -4.34557 | overlap 106901 106901 ACCTTTCACCCATTG GGGGATAACACCCTC AAT GGCAGTGTTATCCCC TTTACTTTTTACATT NTHI0118 106981 - 107577 + | hypothetical protein TERM 165 107594 - 107618 + F 100 -13 -4.77757 | opp_overlap 107594 CTATTTACCTTGAAA GCCTATCTAC TTTAT GTAGATAGGC TTTTCCTTTTTAGGA TERM 166 107618 - 107594 - f 95 -13 -3.57792 | opp_overlap 107594 CTATTTACCTTGAAA GCCTATCTAC TTTAT GTAGATAGGC TTTTCCTTTTTAGGA NTHI0119 107635 - 108399 + | hypothetical protein pilL 108498 - 109127 + | putative lipoprotein TERM 167 109470 - 109459 - g 84 -2.2 -5.76949 | overlap 109461 TACTGGCAAAAAAAA TGCA CGAC CGCA TGGAGAGAGAGCTGC NTHI0121 109131 - 109871 + | hypothetical protein TERM 168 110040 - 110071 + G 77 -9.5 -3.53012 | gap 1, opp_overlap 110039 110038 GGTGGTATGGAAATG TTTCCCCA-ACCGG GGCAA CCGGTGTGGGGCAA TTTACCCGGGGCACC NTHI0122 109850 - 110608 + | hypothetical protein NTHI0123 110624 - 111130 + | hypothetical protein TERM 169 111397 - 111417 + G 80 -9.7 -3.64703 | opp_overlap 111397 CCAGTAAGTAAAAAA GCCTTGTTC TTA GGACGAGGC TTTGAATGGGAACCA TERM 170 111417 - 111397 - g 81 -5.3 -5.30155 | opp_overlap 111397 CCAGTAAGTAAAAAA GCCTTGTTC TTA GGACGAGGC TTTGAATGGGAACCA NTHI0125 111127 - 113376 + | hypothetical protein TERM 171 113737 - 113721 - g 90 -2.3 -5.87688 | ACAAGTCAAAAAAAA GAAAAAG GGT CTTTTTT ACTACATTAATGCGG NTHI0126 113695 - 114381 + | hypothetical protein TERM 172 114404 - 114433 + F 100 -12.3 -5.28176 | CTATGTTGTCATTAT GGGTGCTTATTTT TCCA AGAATAAGCGCCC TTTTTTATCACTAAA TERM 173 114504 - 114535 + F 81 -9.6 -3.36878 | CTCTCTTCTTTGGCA CTCTTTGCTTGGAA TCTG TTTCAAGTAAGGAG TTCTCCGTGACTAAA TERM 174 114851 - 114833 - g 73 -6.8 -4.27584 | ATTCGTAACTTAAAA GAAGATTA TCT CAATCTTC GGAGTCAATAGCAGA NTHI0127 114512 - 114862 + | hypothetical protein NTHI0128 115131 - 115532 + | hypothetical protein NTHI0129 115552 - 115923 + | hypothetical protein TERM 175 116181 - 116155 - g 95 -13 -3.72576 | CCTTTGCTTATCAAA CCTTCCAGCAGT TAA ACCGCTGGATGG AGAATGGCGAGGAAG TERM 176 116507 - 116492 - g 70 -7.6 -3.54838 | opp_overlap 116506 AACAGATTTACAGAA CAATCC TTGG GGATTG GGATTTAACTGCTAC NTHI0130 115935 - 116579 + | hypothetical protein TERM 177 117432 - 117416 - g 79 -5.1 -5.32608 | AAAAAATTGAAAAAA GTCACCA CAA CAGTGAC AACTCAAACAAAATA NTHI0131 116579 - 117448 + | hypothetical protein NTHI0132 117459 - 118859 + | hypothetical protein TERM 178 119133 - 119100 - g 76 -10.5 -2.63301 | gap 1, opp_overlap 119105, overlap 119105 TATACCCGTACAGCA GAAAACGAGGTGAAAA ATC TTTTC-CCTCGTTTAC CAAACCCTGATTTAG TERM 179 119128 - 119105 - g 84 -9 -4.50976 | gap 1, opp_overlap 119105, overlap 119100 CCGTACAGCAGAAAA CGAGGTGAAAA ATC TTTTC-CCTCG TTTACCAAACCCTGA TERM 180 119105 - 119128 + G 74 -9 -3.53444 | gap 1, opp_overlap 119105 119100 CCGTACAGCAGAAAA CGAGGTGAAAA ATC TTTTC-CCTCG TTTACCAAACCCTGA NTHI0133 118869 - 119276 + | putative lipoprotein NTHI0134 119292 - 122162 + | hypothetical protein NTHI0135 122170 - 122577 + | hypothetical protein NTHI0136 122587 - 122910 + | hypothetical protein NTHI0137 122919 - 124412 + | hypothetical protein TERM 181 124460 - 124413 - T 100 -18.2 -4.28925 | gap 1, opp_overlap 124425 124452, overlap 124425 AGTAAAAAAATATAA CGTATA-AAAAAAGTCCATCTGT TAG ACAGATGGACTTTTTTATTTACG AAAATAATTAATCGT TERM 182 124425 - 124447 + T 100 -15 -5.63517 | opp_overlap 124425 124413 TAACGTATAAAAAAA GTCCATCTGT TAG ACAGATGGAC TTTTTTATTTACGAA TERM 183 124447 - 124425 - T 100 -15 -5.66684 | opp_overlap 124425, overlap 124413 TAACGTATAAAAAAA GTCCATCTGT TAG ACAGATGGAC TTTTTTATTTACGAA NTHI0139 124797 - 124468 - | hypothetical protein TERM 184 124891 - 124910 + rH 78 -7.2 -4.3534 | opp_overlap 124877 AGGAAAAATGTGATT TTTGCGAT CCAC GTCGCAAA TTTTACTAATTGGGG tnpA 127960 - 124955 - | transposon Tn3 transposase TERM 185 125632 - 125621 - GH 72 -5.8 -4.3739 | CAGGCGTGGAGAAAA CTGG TATC CCAG CAGCCAGAAAAGGCC TERM 186 126700 - 126671 - GH 75 -4.9 -5.00616 | gap 1 TGCGTCGTCAAAAAA CTGCCGCCGTGAGC TGA ACTCCCGGCTG-AG GTAGTCACAGGCATT TERM 187 126995 - 127006 + Gg 72 -2.2 -5.24531 | gap 1 ATCCAGATCCTTCAG CGAGC GGA GC-CG TTTTTTCTGCCCAAT NTHI0140 126925 - 127041 + | hypothetical protein tnpR 128088 - 128681 + | transposon Tn3 resolvase NTHI2055 128729 - 129589 + | beta-lactamase TEM precursor TERM 188 129654 - 129671 + F 74 -5.6 -4.79223 | opp_overlap 129654 ATTTTTAATTTAAAA GGATCT AGGTGA AGATCC TTTTTGATAATCTCA NTHI0143 129813 - 129992 + | hypothetical protein TERM 189 129991 - 129977 - T 72 -5 -4.6526 | ACAAATCTTTAAAAA TAGTGA ATA CCACTA AAAAAATAAGCGGGA TERM 190 129993 - 130023 + T 95 -14.2 -3.19687 | opp_overlap 129998, overlap 129998 AGTGAATACCACTAA AAAAATAAGCGGGA AAA TCCCGCTTATTTTA TCTCTATTTACGCTT TERM 191 129998 - 130018 + T 100 -14.1 -4.70534 | opp_overlap 129998, overlap 129993 ATACCACTAAAAAAA TAAGCGGGA AAA TCCCGCTTA TTTTATCTCTATTTA TERM 192 130018 - 129998 - T 100 -14.1 -5.56568 | opp_overlap 129993 129998 ATACCACTAAAAAAA TAAGCGGGA AAA TCCCGCTTA TTTTATCTCTATTTA NTHI0144 130444 - 130037 - | hypothetical protein NTHI0145 132460 - 130460 - | hypothetical protein TERM 193 131866 - 131881 + g 70 -7.6 -3.56042 | overlap 131869 CTTTACCTTCCTTAC CTTGAG ATTC CTCAAG TCTCTTTTTAGCTCG TERM 194 132112 - 132133 + g 74 -9.5 -3.08173 | gap 1, opp_overlap 132111 132112, overlap 132114 CCATTGCAGGTAAAC TC-GCCACAG CTC CTGTGGCTGA TTCGATAACGTTACT TERM 195 132133 - 132112 - G 72 -9.5 -2.79327 | gap 1, opp_overlap 132112 132114, overlap 132111 CCATTGCAGGTAAAC TC-GCCACAG CTC CTGTGGCTGA TTCGATAACGTTACT TERM 196 132114 - 132130 + g 86 -12.3 -2.7556 | opp_overlap 132112 132111, overlap 132112 ATTGCAGGTAAACTC GCCACAG CTC CTGTGGC TGATTCGATAACGTT TERM 197 132168 - 132188 + g 91 -9.9 -4.78107 | AGATCTTTAAATCCT TCAGTTAAA CCA TTTAACTGA TTTTTAATACTCGTC NTHI0146 133416 - 132475 - | hypothetical protein NTHI0147 133856 - 133413 - | hypothetical protein TERM 198 134156 - 134202 + H 84 -3.9 -5.64421 | gap 2, opp_overlap 134155 134154 134172, overlap 134152 GCCACCTTAAAGACC TTCCGAGGGAAAATGAT-T-CCC TTC GGGCATGTCATTTTTCCAAGGAA TTTTTTATTTCACAT TERM 199 134487 - 134525 + G 76 -2.6 -5.34655 | gap 1, opp_overlap 134496 CAATTATTGATGATG TGC-AAAGAACGTGGTT AAAACG AACAACGTTATTTAGCA TTTTATTTTTGATTG NTHI0148 134168 - 134587 + | hypothetical protein TERM 200 134619 - 134652 + F 73 -9 -3.25823 | overlap 134612 CATTTTCAACCCTAA GGGGAATTTTTACC CTTAGA GGTAAAGGTTTCCC TTGCTGTAGGAGAAA TERM 201 134850 - 134883 + G 70 -6.2 -4.23213 | gap 1, opp_overlap 134846 134843 GACAGAAATATCACT TCTTTACAGTTTCGC CATAC GC-AAACCGTAAAGA TTTGTTAAGTGTAAG NTHI0149 134672 - 134905 + | hypothetical protein NTHI0150 134908 - 135156 + | hypothetical protein NTHI0151 135160 - 135318 + | hypothetical protein TERM 202 135378 - 135350 - f 100 -11.7 -4.31835 | opp_overlap 135350 AACCTTTACAACAAA CCTTGATCATGCC ATT GGCGTGTTCAAGG TTTTCTTTTACCCGA TERM 203 135350 - 135378 + F 100 -13.9 -5.07652 | opp_overlap 135350 AACCTTTACAACAAA CCTTGATCATGCC ATT GGCGTGTTCAAGG TTTTCTTTTACCCGA TERM 204 135396 - 135427 + F 100 -11.6 -5.7946 | overlap 135387 135386 TTCTTTTACCCGACT GGGAGCAATTTCCC ATTC GGGGGGTTGTTCCC TTTTTTTATTGGAGA traC 135449 - 136402 + | putative antirestriction protein TERM 205 136478 - 136448 - f 70 -6.9 -3.87373 | gap 1, opp_overlap 136449 136450 136457 136458, overlap 136451 136474 136475 TAGAGCTCTCATAAA CCACCCTTTGGGGA GTAA TCCTCAAAGGG-GA TTGCTCCCGTTATTT TERM 206 136450 - 136477 + F 77 -10.6 -2.51738 | opp_overlap 136448 136451 136474 136475, overlap 136449 136457 136458 GAGCTCTCATAAACC ACCCTTTGGGGA GTAA TCCTCAAAGGGG ATTGCTCCCGTTATT TERM 207 136476 - 136451 - f 85 -11.9 -3.01125 | opp_overlap 136450 136449 136457 136458, overlap 136448 136474 136475 AGCTCTCATAAACCA CCCTTTGGGGA GTAA TCCTCAAAGGG GATTGCTCCCGTTAT TERM 208 136457 - 136487 + F 100 -12.6 -4.18506 | opp_overlap 136451 136448 136474 136475, overlap 136450 136449 136458 CATAAACCACCCTTT GGGGAGTAATCCTC AAA GGGGATTGCTCCCG TTATTTTAGGAGTAA TERM 209 136458 - 136486 + F 100 -16.1 -3.10622 | opp_overlap 136451 136448 136474 136475, overlap 136450 136449 136457 ATAAACCACCCTTTG GGGAGTAATCCTC AAA GGGGATTGCTCCC GTTATTTTAGGAGTA NTHI0153 136506 - 137267 + | type I restriction enzyme M subunit TERM 210 137305 - 137268 - f 100 -15.9 -3.15579 | opp_overlap 137269 137274, overlap 137270 137274 CCAATGTTTTACTAA CATAAACACCCTTATCT AAAC AGATAAGGGTGTTTACA TATTTAACAATGTAC TERM 211 137269 - 137304 + F 95 -15 -2.62171 | opp_overlap 137268 137270 137274, overlap 137274 CAATGTTTTACTAAC ATAAACACCCTTATCT AAAC AGATAAGGGTGTTTAC ATATTTAACAATGTA TERM 212 137303 - 137270 - f 100 -18.5 -3.13899 | opp_overlap 137269 137274, overlap 137268 137274 AATGTTTTACTAACA TAAACACCCTTATCT AAAC AGATAAGGGTGTTTA CATATTTAACAATGT TERM 213 137274 - 137299 + F 100 -14.9 -3.81137 | opp_overlap 137270 137268 137274, overlap 137269 TTTTACTAACATAAA CACCCTTATCT AAAC AGATAAGGGTG TTTACATATTTAACA TERM 214 137299 - 137274 - f 100 -14.9 -4.23674 | opp_overlap 137274 137269, overlap 137270 137268 TTTTACTAACATAAA CACCCTTATCT AAAC AGATAAGGGTG TTTACATATTTAACA NTHI0154 137493 - 138059 + | hypothetical protein TERM 215 138066 - 138079 + F 79 -8.1 -3.922 | opp_overlap 138066, overlap 138078 TATTATTAACAACAA GCCAC GTAA GTGGC TTTAATTAGAGCTTT TERM 216 138079 - 138066 - f 79 -8.1 -4.00445 | opp_overlap 138066 138078 TATTATTAACAACAA GCCAC GTAA GTGGC TTTAATTAGAGCTTT NTHI0155 138099 - 138473 + | hypothetical protein NTHI0156 138463 - 139140 + | hypothetical protein TERM 217 139539 - 139527 - g 72 -7.7 -3.76492 | CCCAAGTTTATCAAA CCATC GGT GATGG CAAAATAAAAACACC NTHI0157 139118 - 139735 + | hypothetical protein TERM 218 139968 - 139928 - T 100 -17.2 -4.90381 | opp_overlap 139928 139938, overlap 139938 TTCAATATAACAAAA CAAACAAAAATGGCAGAG TTGAG CCCTGCCATTTTTGTTTA TAATTCTCAGAAATA TERM 219 139928 - 139968 + T 89 -13.5 -2.8294 | opp_overlap 139928 139938, overlap 139938 TTCAATATAACAAAA CAAACAAAAATGGCAGAGT TGA GCCCTGCCATTTTTGTTTA TAATTCTCAGAAATA TERM 220 139938 - 139958 + T 93 -7.5 -5.4182 | opp_overlap 139938 139928, overlap 139928 CAAAACAAACAAAAA TGGCAGAGT TGA GCCCTGCCA TTTTTGTTTATAATT TERM 221 139958 - 139938 - T 95 -9 -5.59962 | opp_overlap 139928 139938, overlap 139928 CAAAACAAACAAAAA TGGCAGAG TTGAG CCCTGCCA TTTTTGTTTATAATT NTHI0158 140598 - 139999 - | resolvase/integrase-like protein NTHI0159 140804 - 140613 - | hypothetical protein NTHI0160 141527 - 141273 - | hypothetical protein TERM 222 142550 - 142592 + H 83 -11.4 -2.89564 | opp_overlap 142555, overlap 142562 CTACTTTTCTTAATC TAAAATGACAAAGACCACCG AAA TGGTGGTCTTTGTCACTAAA TATATAGGATGGGAA TERM 223 142587 - 142555 - H 100 -19.4 -4.27316 | opp_overlap 142550 142562 TTTCTTAATCTAAAA TGACAAAGACCACC GAAAT GGTGGTCTTTGTCA CTAAATATATAGGAT TERM 224 142562 - 142580 + H 93 -11 -3.93136 | opp_overlap 142555, overlap 142550 ATCTAAAATGACAAA GACCACCG AAA TGGTGGTC TTTGTCACTAAATAT NTHI0161 142718 - 143431 + | hypothetical protein TERM 225 143530 - 143486 - f 100 -21.8 -3.89957 | opp_overlap 143493 143496 143499 143524, overlap 143487 143489 143493 143496 143499 GCTAATAACTAATAA GTAGAAAGAACAATGGGGAG TAAAG CTCCCCATTGTTCTTTCTAG CCGCTGCCTAGAAAT TERM 226 143529 - 143487 - f 100 -25.3 -2.93251 | opp_overlap 143493 143496 143499 143524, overlap 143486 143489 143493 143496 143499 CTAATAACTAATAAG TAGAAAGAACAATGGGGAG TAAAG CTCCCCATTGTTCTTTCTA GCCGCTGCCTAGAAA TERM 227 143527 - 143489 - f 100 -23.5 -3.0062 | opp_overlap 143493 143496 143499 143524, overlap 143487 143486 143493 143496 143499 AATAACTAATAAGTA GAAAGAACAATGGGGAG TAAAG CTCCCCATTGTTCTTTC TAGCCGCTGCCTAGA TERM 228 143523 - 143493 - f 100 -18.5 -4.14859 | opp_overlap 143493 143496 143499, overlap 143489 143487 143486 143496 143499 ACTAATAAGTAGAAA GAACAATGGGGAG TAAAG CTCCCCATTGTTC TTTCTAGCCGCTGCC TERM 229 143493 - 143523 + F 100 -19.2 -3.86897 | opp_overlap 143493 143489 143487 143486 143496 143499, overlap 143496 143499 ACTAATAAGTAGAAA GAACAATGGGGAGT AAA GCTCCCCATTGTTC TTTCTAGCCGCTGCC TERM 230 143520 - 143496 - f 100 -14.4 -4.1774 | opp_overlap 143493 143496 143499, overlap 143493 143489 143487 143486 143499 AATAAGTAGAAAGAA CAATGGGGAG TAAAG CTCCCCATTG TTCTTTCTAGCCGCT TERM 231 143496 - 143520 + F 100 -15.1 -4.06687 | opp_overlap 143496 143493 143489 143487 143486 143499, overlap 143493 143499 AATAAGTAGAAAGAA CAATGGGGAGT AAA GCTCCCCATTG TTCTTTCTAGCCGCT TERM 232 143499 - 143517 + F 100 -11 -4.15703 | opp_overlap 143496 143493 143489 143487 143486 143499, overlap 143496 143493 AAGTAGAAAGAACAA TGGGGAGT AAA GCTCCCCA TTGTTCTTTCTAGCC TERM 233 143517 - 143499 - f 100 -10.3 -4.18213 | opp_overlap 143499 143496 143493, overlap 143496 143493 143489 143487 143486 AAGTAGAAAGAACAA TGGGGAG TAAAG CTCCCCA TTGTTCTTTCTAGCC TERM 234 143947 - 143930 - f 79 -9.9 -3.28269 | opp_overlap 143930, overlap 143918 143925 AAGGGTCAAAGGTAA CCTTTCC TAAT GGAAAGG TCTTACCTAAAAAGG TERM 235 143930 - 143947 + F 77 -9.9 -3.08679 | opp_overlap 143918 143930 143925 AAGGGTCAAAGGTAA CCTTTCC TAAT GGAAAGG TCTTACCTAAAAAGG TERM 236 144096 - 144079 - f 70 -7.1 -3.84017 | opp_overlap 144079 144076 CAACTTGAAAGATAA CGTTTAT GTGA ATAAACG TAAATTATGAATGAT NTHI0162 144151 - 145404 + | hypothetical protein TERM 237 147066 - 147077 + G 75 -4.4 -5.10461 | opp_overlap 147053 147057 AGGAAACTGAGGCTG TCTC AGGA GAGA TTTTTGTTGAATGGC NTHI0163 145547 - 147463 + | hypothetical protein TERM 238 147480 - 147490 + F 90 -4 -5.94713 | ACCACATTTGATATG TTAC TTA GTAA TTTTTTTTATACCGT NTHI0164 147524 - 148366 + | putative site-specific recombinase TERM 239 148621 - 148607 - T 77 -8.6 -3.54012 | opp_overlap 148603, overlap 148619 AAATGATGTACACAA GGGATT TAA AATCCC TCGCCTTTCGAGGCG TERM 240 148986 - 148964 - T 100 -11.4 -5.26119 | TTTCTAAAAATAAAA TAGCACCTGA AAA TCAGATGCTA TCCAAAACACAATAA thrC 150293 - 149016 - | threonine synthase thrB 151280 - 150336 - | homoserine kinase TERM 241 150792 - 150768 - G 79 -4.3 -5.2189 | overlap 150757 150769 CCAATTATCAAAAAA TGGCAATTTTT GAC AAATATTGCCG AGCGATTGCACCATA TERM 242 150791 - 150769 - G 72 -7.8 -3.72049 | overlap 150757 150768 CAATTATCAAAAAAT GGCAATTTTT GAC AAATATTGCC GAGCGATTGCACCAT thrA 153740 - 151293 - | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 243 153779 - 153812 + H 86 -11.1 -3.29246 | opp_overlap 153784, overlap 153784 TTTTTAAATTTATAA AAAAACCCGCTATTC AGTT GAATCGCGGGTTTTC TGTATCTTGTTTTTG TERM 244 153807 - 153784 - H 100 -11 -5.68039 | opp_overlap 153779 153784 AAATTTATAAAAAAA CCCGCTATTC AGTT GAATCGCGGG TTTTCTGTATCTTGT TERM 245 153784 - 153807 + H 100 -11 -4.69028 | opp_overlap 153784, overlap 153779 AAATTTATAAAAAAA CCCGCTATTC AGTT GAATCGCGGG TTTTCTGTATCTTGT TERM 246 154485 - 154469 - g 73 -6.6 -4.22748 | GATGAAGAAAGTAAA TCAGGT ATTCA ACCTGA GGAAATGCTAACACT NTHI0168 154064 - 154777 + | hypothetical protein grk 155953 - 154817 - | glycerate kinase TERM 247 155307 - 155317 + g 90 -8.2 -4.91109 | TGTTTCACCATTTCA GGCG TTG CGCC TTTTTGTGGTCCAAA NTHI0171 157221 - 155962 - | hypothetical protein NTHI0172 158449 - 157343 - | hypothetical protein TERM 248 158550 - 158530 - R 82 -7.6 -4.64676 | gap 1, opp_overlap 158530, overlap 158532 TTATCTGCAAGAAAA GACGGGAGA CTAT TCTCCCG-C ACTGCGTTTTTATCG TERM 249 158549 - 158532 - R 93 -11.3 -3.93768 | opp_overlap 158530, overlap 158530 ATCTGCAAGAAAAGA CGGGAGA CTAT TCTCCCG CACTGCGTTTTTATC NTHI0173 158971 - 158651 - | hypothetical protein TERM 250 159086 - 159073 - R 72 -2.5 -5.37345 | GTGAACTAGAAAAAA TAAAA CGAA TTTTA GTATCAGATTCATCA NTHI0175 160077 - 159322 - | hypothetical protein TERM 251 160178 - 160159 - H 81 -9.3 -3.77491 | opp_overlap 160159, overlap 160155 GATTAAATAAATTAA GGCGGAA TAATTG TTCCGCC TTTTTCTCTTATTTC TERM 252 160159 - 160178 + H 100 -10 -5.23765 | opp_overlap 160159 160155 GATTAAATAAATTAA GGCGGAAT AATT GTTCCGCC TTTTTCTCTTATTTC NTHI0176 160278 - 160559 + | hypothetical protein TERM 253 160823 - 160813 - g 79 -8.2 -4.11183 | opp_overlap 160821 GGTCAGCACAAAGAA GCCG CTA CGGC TGTGGCAAAAGCCTT hitA 160711 - 161709 + | iron-utilization periplasmic protein hFbpA TERM 254 161753 - 161718 - f 77 -9 -3.5256 | opp_overlap 161719 161720, overlap 161716 161719 GAAATAATCCAAATA TTGCGTGCGTGTATTT GAAA AAATTCACGCACGCGT TTACAATTCTCTAAC TERM 255 161752 - 161719 - f 86 -12.5 -2.70451 | opp_overlap 161719 161720, overlap 161718 161716 AAATAATCCAAATAT TGCGTGCGTGTATTT GAAA AAATTCACGCACGCG TTTACAATTCTCTAA TERM 256 161719 - 161752 + F 100 -14.7 -3.70811 | opp_overlap 161719 161718 161716, overlap 161720 AAATAATCCAAATAT TGCGTGCGTGTATTT GAAA AAATTCACGCACGCG TTTACAATTCTCTAA TERM 257 161720 - 161751 + F 100 -16 -2.82005 | opp_overlap 161719 161718 161716, overlap 161719 AATAATCCAAATATT GCGTGCGTGTATTT GAAA AAATTCACGCACGC GTTTACAATTCTCTA TERM 258 162035 - 162047 + G 81 -5.5 -5.26875 | GTGCTATTTCACTTG GCACG CTT TGTGC TTTTTTACTTGAACG TERM 259 162068 - 162083 + G 78 -3.3 -5.44119 | TACTTGAACGTTATC GCTTT TTCGGT AAAGC TTTTTTTGAAGTGGC TERM 260 162576 - 162554 - g 70 -4.8 -4.64861 | opp_overlap 162555, overlap 162555 TTCGTGGAAAACAAA CCCTTTACCA CAG TGGAAAAGGT GTTACGCGTCCTTAT TERM 261 162575 - 162555 - g 71 -8.3 -3.38435 | opp_overlap 162555, overlap 162554 TCGTGGAAAACAAAC CCTTTACCA CAG TGGAAAAGG TGTTACGCGTCCTTA TERM 262 163078 - 163088 + G 83 -8.2 -4.38876 | GTCGGACAAAGTCTT GGGC GAA GCCC TTTCTATATTTTTCG hitB 161827 - 163347 + | iron(III)-transport system permease protein hFbpB hitC 163349 - 164404 + | iron-utilization ATP-binding protein hFbpC TERM 263 164409 - 164435 + T 84 -8.1 -4.59109 | opp_overlap 164388 164412, overlap 164399 164412 TTTACGCTTAACAAT AAAGCCTTATC TTCAC GATAAGGCTTA TTTTTAAACAATATA TERM 264 164432 - 164412 - T 100 -9.8 -4.45068 | opp_overlap 164399 164409 164412, overlap 164388 ACGCTTAACAATAAA GCCTTATC TTCAC GATAAGGC TTATTTTTAAACAAT TERM 265 164412 - 164432 + T 100 -9.8 -4.40963 | opp_overlap 164388 164412, overlap 164399 164409 ACGCTTAACAATAAA GCCTTATC TTCAC GATAAGGC TTATTTTTAAACAAT NTHI0181 165119 - 164439 - | putative D-alanyl-D-alanine carboxypeptidase dapE 166254 - 165121 - | succinyl-diaminopimelate desuccinylase TERM 266 166014 - 165993 - G 81 -10.1 -3.7282 | overlap 166006 GCATGCCATCAATAA TCTCCGCAG AAAA CGGCGGAGA CGACCATTGATTTTC NTHI0184 166626 - 166282 - | hypothetical protein TERM 267 166671 - 166648 - R 100 -10.4 -5.75538 | opp_overlap 166648 CCTAAAAAAGAAAAA TCCTCAATCT AATC AGACTGAGGA TTTTAACCCTTATAC TERM 268 166648 - 166671 + r 81 -8.2 -4.1585 | opp_overlap 166648 CCTAAAAAAGAAAAA TCCTCAATCT AATC AGACTGAGGA TTTTAACCCTTATAC htpG 168600 - 166705 - | heat shock protein 90 NTHI0186 168812 - 169651 + | NIF3-like protein TERM 269 169659 - 169693 + F 72 -5.8 -4.42974 | opp_overlap 169661, overlap 169660 169661 CAGCATAAAATACAA AAGTGCGGTAAAAA TATTTCT TTTTTACCGCACGC TTTCTTCTCTATAAG TERM 270 169660 - 169692 + F 77 -9.3 -3.25061 | opp_overlap 169661, overlap 169659 169661 AGCATAAAATACAAA AGTGCGGTAAAAA TATTTCT TTTTTACCGCACG CTTTCTTCTCTATAA TERM 271 169691 - 169661 - f 100 -12.8 -4.94487 | opp_overlap 169660 169659 169661 GCATAAAATACAAAA GTGCGGTAAAAA TATTTCT TTTTTACCGCAC GCTTTCTTCTCTATA TERM 272 169661 - 169691 + F 86 -12.8 -2.54314 | opp_overlap 169661, overlap 169660 169659 GCATAAAATACAAAA GTGCGGTAAAAA TATTTCT TTTTTACCGCAC GCTTTCTTCTCTATA TERM 273 170970 - 170960 - g 79 -6.8 -4.84492 | overlap 170961 CGAATGACAACAAAA TCGG CAG CCGA GTGGCCTCCGTGCAT TERM 274 172032 - 172009 - g 74 -8.8 -3.62572 | CACGACTATTTCAAA GCCGAAGTGC AAGC GCACATCAGC GAAGCATGGCTGAAT hsdM1 169825 - 172197 + | putative type I restriction-modification system, methyltransferase subunit TERM 275 172562 - 172579 + G 70 -4.9 -4.63218 | TAAATTAGATGATTA TCGGAAA TTGG TTTTCGA TTTTATTGCACCGCC TERM 276 173513 - 173495 - g 72 -6.1 -4.51787 | TAGAGAACAAAACAA CAATGTT TATCT AACATTG CGCAACCGTGTTACC NTHI0190 172380 - 173789 + | transcription regulator TERM 277 174318 - 174340 + G 70 -8.6 -3.14125 | opp_overlap 174305, overlap 174316 AATAAAAAATACTTT TCGTATTTAT TAC ATAGATACGA TGTTGCATATATGAA hsdS1 173961 - 175211 + | putative type I site-specific restriction-modification system, S subunit TERM 278 175308 - 175293 - f 74 -3.3 -5.25805 | overlap 175280 AATAAATTTAAAAAA TTCAC AAAAGG GTGAA AAATGGTTTCAGGAA TERM 279 176976 - 176966 - g 79 -6.8 -4.8048 | GTTTGATAGTAAAAA GGCT CAA AGCC GTCTGAAAGCCTATG TERM 280 178201 - 178215 + G 79 -8.6 -4.10657 | TTCATACCCGTGAAT TGGCTT TCC AAGCCA TTTTGCGCGATGTGA hsdR1 175311 - 178337 + | putative type I site-specific restriction-modification system, R subunit TERM 281 178551 - 178510 - T 90 -11.1 -3.84906 | opp_overlap 178510 178515, overlap 178515 ATAATTCATAAAACA CAAAAGTGCGGTAAAAATA TTTC TTTTTTAACCGCACTTTTA TCTTCTGAAATTATC TERM 282 178510 - 178551 + T 73 -8.9 -3.25906 | opp_overlap 178510 178515, overlap 178515 ATAATTCATAAAACA CAAAAGTGCGGTAAAAATA TTTC TTTTTTAACCGCACTTTTA TCTTCTGAAATTATC TERM 283 178546 - 178515 - T 95 -8.8 -4.94487 | opp_overlap 178510 178515, overlap 178510 TCATAAAACACAAAA GTGCGGTAAAAATA TTTC TTTTTTAACCGCAC TTTTATCTTCTGAAA TERM 284 178515 - 178546 + T 93 -8.8 -4.73682 | opp_overlap 178515 178510, overlap 178510 TCATAAAACACAAAA GTGCGGTAAAAATA TTTC TTTTTTAACCGCAC TTTTATCTTCTGAAA ffh 179941 - 178562 - | Signal recognition particle protein TERM 285 180188 - 180167 - H 93 -8.7 -4.77216 | opp_overlap 180167 AATAACAGGTAAAAA GTGCGGTGA AAAA TGACCGCAC TTTTTGTTGATTAAC TERM 286 180167 - 180188 + H 95 -8.7 -5.1963 | opp_overlap 180167 AATAACAGGTAAAAA GTGCGGTGA AAAA TGACCGCAC TTTTTGTTGATTAAC corB 180192 - 181484 + | putative Mg2+ and Co2+ transporter TERM 287 181544 - 181505 - g 74 -8.6 -3.5771 | opp_overlap 181507, overlap 181496 181506 181510 AAAAACTCCGCCAAA TTGAACCGCACTTTTGAC TTGG ATCATAAGTGCGGTTCTT TTTTTGCGCATTTTT TERM 288 181543 - 181506 - g 86 -12.1 -2.73903 | opp_overlap 181507, overlap 181505 181496 181510 AAAACTCCGCCAAAT TGAACCGCACTTTTGAC TTGG ATCATAAGTGCGGTTCT TTTTTTGCGCATTTT TERM 289 181507 - 181542 + G 100 -14.9 -5.4477 | opp_overlap 181506 181505 181496 181510 AAACTCCGCCAAATT GAACCGCACTTTTGA CTTGGA TCATAAGTGCGGTTC TTTTTTTGCGCATTT TERM 290 181539 - 181510 - g 84 -11.5 -3.27525 | opp_overlap 181507, overlap 181506 181505 181496 CTCCGCCAAATTGAA CCGCACTTTTGAC TTGG ATCATAAGTGCGG TTCTTTTTTTGCGCA TERM 291 181861 - 181896 + G 82 -9.2 -4.09108 | gap 1 TATGCAAATGGTTAC TGATGTTCAACG-CATT GTG ATTGCCGTTGAGCATCA TTTGTATGAGTTAGA NTHI0197 181505 - 182383 + | hypothetical protein NTHI0198 182385 - 182864 + | hypothetical protein TERM 292 182904 - 182889 - T 100 -10.4 -5.46657 | opp_overlap 182889 CAGTGCAACAAAAAA GCCGAC ATTT GTCGGC TTTCTACTATTCTTG TERM 293 182889 - 182904 + T 100 -10.4 -4.10178 | opp_overlap 182889 CAGTGCAACAAAAAA GCCGAC ATTT GTCGGC TTTCTACTATTCTTG NTHI0199 183295 - 182954 - | hypothetical protein serS 183462 - 184751 + | seryl-tRNA synthetase TERM 294 184804 - 184763 - f 73 -9 -3.30338 | opp_overlap 184772, overlap 184772 ATAATCCTTCTAGAA GATAAAAAAGCGTGGA TTTTAAAATT TCCACGCTTTTTTATT ATCAAAGCCTTACAA TERM 295 184795 - 184772 - f 84 -5.3 -5.5208 | opp_overlap 184772, overlap 184763 CTAGAAGATAAAAAA GCGTGGA TTTTAAAATT TCCACGC TTTTTTATTATCAAA TERM 296 184772 - 184795 + F 84 -5.3 -5.55769 | opp_overlap 184772 184763 CTAGAAGATAAAAAA GCGTGGA TTTTAAAATT TCCACGC TTTTTTATTATCAAA gst 185086 - 185715 + | glutathione S-transferase NTHI0201_1 186023 - 185727 - | hypothetical protein TERM 297 187178 - 187151 - g 74 -8.6 -3.66742 | overlap 187149 187154 TTGATATAAATAACA CAAGTACTTTTA ATAT CAAAAGTACTCG GCATGAACTACTATT TERM 298 187451 - 187413 - g 76 -5.5 -4.8667 | gap 1, opp_overlap 187413 TATAGGGCAGAAAAA TTTTGCACCACA-ATATA ATGA TATATCTGTGGGGCAGAA TTATAGTCAGAAAAA hemR 186076 - 188313 + | hemin receptor TERM 299 188345 - 188320 - T 81 -7.6 -4.33851 | opp_overlap 188322, overlap 188322 AAATTTTAGAATAAA TAGCCCGATT GAATCT AATCGGGCTT TATCATAACTATAAT TERM 300 188343 - 188322 - T 87 -10.2 -3.76219 | opp_overlap 188322, overlap 188320 ATTTTAGAATAAATA GCCCGATT GAATCT AATCGGGC TTTATCATAACTATA TERM 301 188322 - 188343 + T 93 -10.9 -3.98661 | opp_overlap 188322 188320 ATTTTAGAATAAATA GCCCGATTG AATC TAATCGGGC TTTATCATAACTATA TERM 302 188470 - 188438 - T 100 -11 -4.59984 | overlap 188455 AAAATTTACAGAAAA TTTATCTTAATATA GGAGA TATATTAAGATAAA TACATCATTAAAGAA TERM 303 189128 - 189183 + T 83 -2.3 -5.79588 | gap 2, opp_overlap 189119 189145, overlap 189142 189145 CAAATATTCTGATTT TTAGG-AAA-AAACAAAAACCCTAGTT TTTC AACTGGGGTTATTTTTTCTTTATCTAA TTTTTTTAATTTTAA TERM 304 189142 - 189167 + T 93 -6.9 -5.76237 | opp_overlap 189119 189145, overlap 189128 189145 TTTAGGAAAAAACAA AAACCCTAGTT TTTC AACTGGGGTTA TTTTTTCTTTATCTA TERM 305 189164 - 189145 - T 95 -6.4 -5.77571 | opp_overlap 189142 189128 189145 AGGAAAAAACAAAAA CCCTAGTT TTTC AACTGGGG TTATTTTTTCTTTAT TERM 306 189145 - 189164 + T 95 -8.6 -4.9072 | opp_overlap 189145, overlap 189142 189128 AGGAAAAAACAAAAA CCCTAGTT TTTC AACTGGGG TTATTTTTTCTTTAT TERM 307 191232 - 191246 + T 80 -7.1 -4.58213 | overlap 191223 TGGTCTTCCGGCGAA CGGGT TTTTC ACCCG TTTTATCGTTACTTA TERM 308 193248 - 193231 - T 74 -9.1 -3.07291 | opp_overlap 193231 AAGGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC TERM 309 194815 - 194796 - T 72 -5.8 -4.40605 | AGCTATAAATAGAAA CACTACTT AAAA AAGTAATG ATGAATTTTCAGTTA NTHI0203 197496 - 195361 - | 23S rRNA m(2)G2445 methyltransferase TERM 310 197563 - 197543 - H 90 -8.4 -5.02502 | TATAGCATAGAAAAA GATGATCT AATTG AGATCATC ATAGCGAGTTAAACT TERM 311 197613 - 197591 - H 100 -15 -5.27023 | opp_overlap 197585 197579 ACTGTAAAAAGAAAA GCCCTGATTT TCT AAATCAGGGC TTCAAAATTTGCTGG TERM 312 198394 - 198384 - g 75 -2.4 -5.40474 | ATGCCTGTAAAAAAA CGTC TAA GTCG AGCACAAATTTATGC mltA 197889 - 198998 + | murein transglycosylase A NTHI0206 198998 - 199768 + | hypothetical protein TERM 313 199783 - 199805 + F 93 -7.8 -5.4833 | opp_overlap 199783 ATCACCTCTTGAAAA TGCACATTGA CCA TAAATGTGCA TTTTTTATTGAATGA TERM 314 199805 - 199783 - f 78 -7.8 -4.08945 | opp_overlap 199783 ATCACCTCTTGAAAA TGCACATTGA CCA TAAATGTGCA TTTTTTATTGAATGA TERM 315 200414 - 200390 - g 74 -7.9 -4.02456 | overlap 200393 200404 AAACACGAGCATAAA CACGATCACGA ACA TCATGATCACG ATCATCACGAGGGTT znuA 199946 - 200947 + | high-affinity zinc transporter periplasmic component TERM 316 200990 - 200961 - T 100 -10.8 -4.58685 | opp_overlap 200964, overlap 200964 AAATCTTTCTAAAAA CAATGACCGCAC ATAAAA GTGCGGTCATTT TCTTTGCTAAATTTG TERM 317 200987 - 200964 - T 100 -12.5 -4.40561 | opp_overlap 200964, overlap 200961 TCTTTCTAAAAACAA TGACCGCAC ATAAAA GTGCGGTCA TTTTCTTTGCTAAAT TERM 318 200964 - 200987 + T 100 -12.5 -4.9448 | opp_overlap 200964 200961 TCTTTCTAAAAACAA TGACCGCAC ATAAAA GTGCGGTCA TTTTCTTTGCTAAAT NTHI0209 201503 - 200997 - | hypothetical protein TERM 319 201610 - 201572 - R 100 -11.3 -5.38958 | opp_overlap 201567 201572 AGTCAGAAATAAAAA GTACAGTCAATTTAGAA ACAGG TTCTAAATTAACCGCAC TTTTATTATTTCAGT TERM 320 201572 - 201610 + r 75 -4.7 -5.011 | opp_overlap 201572, overlap 201567 AGTCAGAAATAAAAA GTACAGTCAATTTAGAA ACAGG TTCTAAATTAACCGCAC TTTTATTATTTCAGT mpl 202974 - 201616 - | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase TERM 321 203323 - 203341 + r 95 -8.9 -5.60993 | opp_overlap 203323 TAATCCTATAAAAAA TGCCTGT GTAAA ACAGGCA TTTTTTTATCCGCAC TERM 322 203341 - 203323 - R 95 -8.9 -5.27923 | opp_overlap 203323 TAATCCTATAAAAAA TGCCTGT GTAAA ACAGGCA TTTTTTTATCCGCAC metC 204546 - 203359 - | cystathionine beta-lyase tsaA 204677 - 205285 + | peroxiredoxin TERM 323 205307 - 205321 + F 100 -10 -5.86465 | opp_overlap 205307 ATTATTTACAAGAAA GCCACA TAA TGTGGC TTTTTTTATATTCTT TERM 324 205321 - 205307 - f 100 -10 -4.33819 | opp_overlap 205307 ATTATTTACAAGAAA GCCACA TAA TGTGGC TTTTTTTATATTCTT pgsA 205386 - 205943 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 325 206007 - 206020 + T 80 -2.5 -5.72207 | opp_overlap 206007 TTATTTTTAATCAAA TAAAA TATT TTTTA TTTTTTTCGTTTGAC TERM 326 206141 - 206125 - T 81 -10.9 -2.62616 | opp_overlap 206140 TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 327 206224 - 206204 - T 79 -10.5 -2.89742 | opp_overlap 206203, overlap 206207 206219 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG CCTTTCGAGGCGTGC TERM 328 206221 - 206207 - T 77 -8.6 -3.5947 | opp_overlap 206203, overlap 206204 206219 AATCGGTAGACACAA GGGATT TAA AATCCC TCGCCTTTCGAGGCG TERM 329 206410 - 206421 + T 93 -5.8 -5.9218 | opp_overlap 206409 206410 TAAAAATAAAGTAAG CACC GAAA GGTG TTTTTTTATTATCTA TERM 330 206483 - 206461 - T 100 -10.6 -5.38951 | opp_overlap 206461 206460 AACTCATATAAAAAA TCCCCGACTC AAA GAATCAGGGA CTTTTACAATCAAAC ppa 207037 - 206507 - | inorganic pyrophosphatase NTHI0215 207271 - 208587 + | hypothetical protein TERM 331 208619 - 208605 - f 84 -6.4 -5.06472 | opp_overlap 208605 208605 ACAGAAATAAGAAAA GGGAAA ATC CTTCCC CTTAATTTTAATCAC TERM 332 208639 - 208660 + F 100 -10.9 -5.60993 | opp_overlap 208634 208639 ATTTTAATCACAAAA GTGCGGTGA AATT TTACCGCAC TTTTTTTATACGCAG TERM 333 208660 - 208639 - f 89 -8.7 -4.54821 | opp_overlap 208639, overlap 208634 ATTTTAATCACAAAA GTGCGGTGA AATT TTACCGCAC TTTTTTTATACGCAG udk 208810 - 209451 + | uridine kinase dcd 209460 - 210047 + | deoxycytidine triphosphate deaminase TERM 334 210077 - 210095 + G 93 -7.4 -5.51612 | CGCGCTTATCGTAGG GATCGTCG CTT TGGCGATC TTTTCTTTTTTATAT NTHI0220 210051 - 211226 + | hypothetical protein TERM 335 211465 - 211475 + G 72 -5.4 -4.58724 | GGAACGTAAAAGTCT GCTT ATT AAGC TTTTCATTATATTTA NTHI0221 211226 - 212434 + | sugar efflux transporter TERM 336 212465 - 212421 - T 93 -4.4 -6.04419 | gap 1, opp_overlap 212424 AAAACAATAAAAAAA TAACCGCAC-TTTAGTTCTCC AAAA AGAGTTTTAAAAGTGCGGTTA AATCTGTCTAAGTTT engA 214009 - 212495 - | GTP-binding protein EngA TERM 337 214098 - 214120 + r 93 -10.6 -3.94811 | opp_overlap 214098 TAAAGAAAAGAAAAA GCCACAGGAT ACA ATCCTATGGC TTTCTAAATACTGTT TERM 338 214120 - 214098 - R 100 -12.8 -5.67711 | opp_overlap 214098 TAAAGAAAAGAAAAA GCCACAGGAT ACA ATCCTATGGC TTTCTAAATACTGTT TERM 339 214197 - 214165 - R 90 -10.7 -3.82191 | opp_overlap 214166, overlap 214166 TTAACGTTATAATAA TCTCGCTTTCAAG GATCCAA CTTGAAAGCGAGT GTTGCGCTTTTTCGC TERM 340 214166 - 214196 + r 95 -14.2 -3.17553 | opp_overlap 214165 214166 TAACGTTATAATAAT CTCGCTTTCAAG GATCCAA CTTGAAAGCGAG TGTTGCGCTTTTTCG TERM 341 214196 - 214166 - R 93 -14.2 -2.88832 | opp_overlap 214166, overlap 214165 TAACGTTATAATAAT CTCGCTTTCAAG GATCCAA CTTGAAAGCGAG TGTTGCGCTTTTTCG TERM 342 214307 - 214328 + r 89 -10.9 -3.68302 | opp_overlap 214305 214303 214307 TAATAAGACAACATA CTAGGGAGT AACC GCTCCCTAG TTCTTCAAATATTAA TERM 343 214328 - 214307 - R 83 -10.2 -3.31176 | opp_overlap 214307, overlap 214305 214303 TAATAAGACAACATA CTAGGGAG TAACCG CTCCCTAG TTCTTCAAATATTAA TERM 344 214394 - 214407 + r 73 -8.1 -3.53068 | opp_overlap 214394, overlap 214392 214390 TCAGATACAAAAAAA GCACC CTTA GGTGC TATCTTTATTTATCT TERM 345 214407 - 214394 - R 93 -8.1 -5.76633 | opp_overlap 214394 214392 214390 TCAGATACAAAAAAA GCACC CTTA GGTGC TATCTTTATTTATCT dnaQ 215458 - 214691 - | DNA polymerase III subunit epsilon TERM 346 214820 - 214839 + g 75 -2.1 -5.47159 | AAGTAATTTCAAATT GTGCG AAAAATCTAC CGCAC TTTTTATTTCTTCCG rnhA 215519 - 215983 + | ribonuclease H TERM 347 216295 - 216312 + G 73 -6.9 -4.06419 | opp_overlap 216309 GTGCATTCGCAGCTT CAGCAGC AAAC GCAGCTG TTGTTTATAACAACG ompP2 216249 - 217346 + | Outer membrane protein P2 precursor TERM 348 217396 - 217379 - T 76 -9.9 -2.82923 | opp_overlap 217379, overlap 217378 ATTATTAAAAGCAAG GCGAATC GAAA GATTCGC TTTTTTTGCTTAAAA TERM 349 217379 - 217396 + T 100 -9.9 -5.63103 | opp_overlap 217378 217379 ATTATTAAAAGCAAG GCGAATC GAAA GATTCGC TTTTTTTGCTTAAAA TERM 350 217508 - 217489 - T 93 -7.2 -5.54885 | opp_overlap 217489 AATATTAATAAAAAA TCTGTGAC ATAT ATCACAGA TTTTTAAATCAATTA TERM 351 217489 - 217508 + T 80 -6.5 -4.68424 | opp_overlap 217489 AATATTAATAAAAAA TCTGTGA CATATA TCACAGA TTTTTAAATCAATTA nagA 218688 - 217543 - | N-acetylglucosamine-6-phosphate deacetylase TERM 352 218262 - 218274 + g 84 -6.2 -5.28778 | CACGAATATATTCGG GGCG GTGTA CGCC TTTTTTCTCAATGCT TERM 353 218315 - 218326 + g 75 -4.4 -5.05301 | opp_overlap 218315 CCTTCAATATGTAAA CCAA GTGC TTGG TTTTTATGCTTGTTT TERM 354 218799 - 218781 - R 87 -13.2 -2.78384 | opp_overlap 218754, overlap 218754 TTGTTTGTGATTATA GGGCGAAT GTA ATTCGCCC CTACATAAAGATGAA nagB 219637 - 218825 - | glucosamine-6-phosphate deaminase TERM 355 219001 - 219013 + g 84 -7.7 -4.83269 | overlap 218992 218998 CTTCAACGGCAGCTT GCACT GCC AGTGC TTTTTGATGTCCTGT nanA 220854 - 219973 - | N-acetylneuraminate lyase TERM 356 220652 - 220670 + g 84 -6 -5.19003 | TGATCTTTTGCTTCA TCTTTTGC AAT GCGGAAGA TTTCTTTTTTCTCTT NTHI0229 221731 - 220865 - | putative HTH-type transcriptional regulator nanK 222626 - 221724 - | N-acetylmannosamine kinase nanE 223357 - 222671 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 357 223115 - 223100 - G 72 -5.4 -4.59511 | gap 1, overlap 223102 AATATCTTGTAAAAA CG-GCGT AAT ACGCACG GGACTATCAGGCAAA TERM 358 223158 - 223144 - G 72 -8.6 -3.30619 | AATCACGTTTTACAA TTCCGA TAA TCGGAA CATTCACAAAAGGAC TERM 359 223486 - 223510 + H 73 -3.7 -5.17353 | ATGAAAAAGAAATGC CATTTTAAAGA ATA TTTTTGAAGTG TTTTTTCATAAATGT TERM 360 224264 - 224225 - g 70 -7.2 -3.72695 | opp_overlap 224233, overlap 224237 224253 224255 ACTTCGTGTACCAAA TGCTGCAACAAACTTAGC CTAT GCTAAATATGTTGGTGCA TCGCCAACACCAATG NTHI0232 223707 - 224696 + | putative sialic acid transporter, TRAP-type C4-dicarboxylate transport system, periplasmic component TERM 361 224703 - 224729 + F 83 -10.2 -3.3363 | overlap 224707 AATCCATAATCCCTC TTTAGTGTGCCG TAA TGGCACACTACA TTCCCTTATTCTTCA TERM 362 224707 - 224725 + F 80 -11 -2.58699 | overlap 224703 CATAATCCCTCTTTA GTGTGCCG TAA TGGCACAC TACATTCCCTTATTC TERM 363 225929 - 225916 - g 79 -3.7 -5.44119 | CGCATTGCAAAAAAA CGAGG TTAT CCACG TACACCAAAAGCCAC siaT 224761 - 226611 + | hypothetical protein TERM 364 226613 - 226657 + F 95 -12.5 -3.58522 | opp_overlap 226618, overlap 226618 TATTGATACCATAAT AAAAAGTGCGGTTGAAAAA CATTAAA TTTTTTAACCGCACTTTTA TCTTTCTCGTAAGTT TERM 365 226652 - 226618 - f 100 -10.9 -5.2291 | opp_overlap 226618 226613 ATACCATAATAAAAA GTGCGGTTGAAAAAC ATTAA ATTTTTTAACCGCAC TTTTATCTTTCTCGT TERM 366 226618 - 226652 + F 100 -12.4 -4.85822 | opp_overlap 226618, overlap 226613 ATACCATAATAAAAA GTGCGGTTGAAAAA CATTAAA TTTTTTAACCGCAC TTTTATCTTTCTCGT NTHI0235 226775 - 227914 + | hypothetical protein TERM 367 227955 - 227974 + F 90 -10.7 -3.86897 | opp_overlap 227955 TTATAATAATCAAAA GCGGCGA AATCTA TCGCCGC TTTATACAAAATAAA TERM 368 227974 - 227955 - f 100 -10.7 -4.59414 | opp_overlap 227955 TTATAATAATCAAAA GCGGCGA AATCTA TCGCCGC TTTATACAAAATAAA TERM 369 228109 - 228128 + G 74 -5 -5.00884 | overlap 228111 CCACTACTCTGTTTA TTCATTGC CATA GCAATGTA TTTTTTGCCAAAGAT TERM 370 228111 - 228126 + G 75 -7.6 -4.13561 | overlap 228109 ACTACTCTGTTTATT CATTGC CATA GCAATG TATTTTTTGCCAAAG NTHI0236 228076 - 228510 + | putative protein-S-isoprenylcysteine methyltransferase TERM 371 228533 - 228515 - T 95 -8.9 -5.24129 | opp_overlap 228515 GTTGGCTATAAAAAA CACCTTC ACGAG GAAGGTG TTTTTATCAAATTAA TERM 372 228515 - 228533 + T 95 -8.9 -4.87786 | opp_overlap 228515 GTTGGCTATAAAAAA CACCTTC ACGAG GAAGGTG TTTTTATCAAATTAA hflC 229439 - 228552 - | hypothetical protein hflK 230671 - 229439 - | HflK NTHI0240 231488 - 230781 - | putative 4'-phosphopantetheinyl transferase TERM 373 231493 - 231519 + r 83 -11 -3.03635 | opp_overlap 231493 231498, overlap 231498 231512 TAGGTTGTCATAAAA TAAAAGCACCAT TCA AAGGTGCTTTTA TATTAAAAGGATTTA TERM 374 231519 - 231493 - R 100 -11 -4.3739 | opp_overlap 231493 231498 231512, overlap 231498 TAGGTTGTCATAAAA TAAAAGCACCAT TCA AAGGTGCTTTTA TATTAAAAGGATTTA TERM 375 231514 - 231498 - R 84 -6.5 -5.18371 | opp_overlap 231493 231498 231512, overlap 231493 TGTCATAAAATAAAA GCACCAT TCA AAGGTGC TTTTATATTAAAAGG TERM 376 231498 - 231514 + r 80 -6.5 -4.66537 | opp_overlap 231498 231493, overlap 231493 231512 TGTCATAAAATAAAA GCACCAT TCA AAGGTGC TTTTATATTAAAAGG dcuB2 232879 - 231548 - | anaerobic C4-dicarboxylate transporter TERM 377 232359 - 232321 - G 90 -11 -4.56367 | TACTGTATAAAGAAA GCGCAATCGTACCCGCTA AAG TAGCAGGAACGGTTACAC AAATAATATCTAATA TERM 378 233075 - 233051 - R 100 -9.3 -5.67967 | ATTATTAGAAAAAAA TTAGGCGACTT AAA ACGTCGCCCAA CTTAAAATTATTGAT acpP 233313 - 233083 - | acyl carrier protein fabG 234301 - 233573 - | 3-ketoacyl-(acyl-carrier-protein) reductase fabD 235256 - 234318 - | acyl carrier protein S-malonyltransferase TERM 379 235316 - 235328 + r 74 -9.1 -2.97768 | opp_overlap 235309, overlap 235315 AATTAAAATCGGGTT TCGCC GAT GGCGA CTTACTTTTTCTTTG TERM 380 235684 - 235661 - R 70 -4.4 -4.73614 | opp_overlap 235670 235671, overlap 235664 CACGAGTAAAAGAAA GTAGGTCGCC GTCA GGCGAACCCC TGACATTTAACACAA TERM 381 235703 - 235724 + r 77 -8.7 -3.62275 | opp_overlap 235703 CATTTAACACAAAAA GTGCGGTCA ATTT TTACCGCAC TTTAAAATCATCAAT TERM 382 235724 - 235703 - R 95 -8.7 -5.10767 | opp_overlap 235703 CATTTAACACAAAAA GTGCGGTCA ATTT TTACCGCAC TTTAAAATCATCAAT fabH 236706 - 235756 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 383 236293 - 236307 + g 73 -2.8 -5.22039 | AGAATTGAGATCCGA GCCT ATCACTA AGGC TTTTTTCACTTTGCC TERM 384 236834 - 236817 - R 91 -12.7 -3.23045 | overlap 236815 ATGCAGATAGTAATA CGGGGAC CAAC GTCCCCG CCCATCACATCTAAC rpmF 237062 - 236892 - | 50S ribosomal protein L32 TERM 385 237018 - 237001 - G 70 -7.7 -3.56092 | opp_overlap 236967 GCAGCAGTTGTTAAA GCATCGT GTGA ACGACGC ATATCACGACGTGAA NTHI0249 237609 - 237085 - | hypothetical protein TERM 386 237826 - 237802 - g 73 -7.1 -4.14392 | opp_overlap 237801 TGGCAACGCTTAAAA GTGGCATTTCA ATA TGTCATGCCAC AAATTTATTTAACTC psd 237766 - 238638 + | phosphatidylserine decarboxylase TERM 387 238676 - 238640 - T 100 -10.4 -5.16969 | CATATAAAAAATAAA CAGGATTTATTTCCAT AAATG ACAGAAACAAATCCTG AAAGTAGATATTTCT TERM 388 238723 - 238704 - T 71 -7.9 -3.54424 | opp_overlap 238704 TCTCACTTCTTTAAA GGCAGTA TAACCT TACTGCC TTTTTCTTCTTTCAT TERM 389 238704 - 238723 + T 93 -7.9 -5.39905 | opp_overlap 238704 TCTCACTTCTTTAAA GGCAGTA TAACCT TACTGCC TTTTTCTTCTTTCAT gor 240117 - 238747 - | glutathione reductase TERM 390 239870 - 239883 + g 73 -3.9 -5.15969 | CGACTTTCAATCAGT TTTGA AAAA TCAAA TTTTTTCACTTCAAC TERM 391 240317 - 240294 - R 100 -12.6 -4.9725 | opp_overlap 240300 AGCGTGATAGAAAAA GAGGAAGATT GTTC AATCTTCCTC ACTGTAGATATGTGA NTHI0252 240932 - 240333 - | lipoprotein nqrA 241628 - 242971 + | Na(+)-translocating NADH-quinone reductase subunit A TERM 392 243329 - 243343 + G 79 -4.2 -5.26119 | opp_overlap 243329, overlap 243324 243331 CTTGGGGCTCTAAAA TGGCTC TTG GAGCAA TTTTCTTTTTACCAA TERM 393 243498 - 243484 - g 70 -8.6 -3.13522 | overlap 243482 ATCGTTCCACCAACA TTGCCA CTA TGGCAA GCCGCATTAGGTATT nqrB 242974 - 244209 + | Na(+)-translocating NADH-quinone reductase subunit B TERM 394 244342 - 244328 - g 79 -3.6 -5.3798 | CAAGAAGAACAAAAA TTGCTT GAT AAACAA AAAAATATTTTAAAT nqrC 244202 - 244936 + | Na(+)-translocating NADH-quinone reductase subunit C TERM 395 245484 - 245496 + G 75 -7.7 -4.11183 | overlap 245482 TGGTTTATTCCTACT TGCAC CAA GTGCA TTCTTTATCATCGGA nqrD 244936 - 245562 + | Na(+)-translocating NADH-quinone reductase subunit D nqrE 245566 - 246162 + | Na(+)-translocating NADH-quinone reductase subunit E TERM 396 246555 - 246539 - g 75 -9.5 -3.25515 | overlap 246537 ATGTAAAAGGTAATA TGGAAGT TGA ACTTCCA GAAGAAATCTTCGGC nqrF 246175 - 247410 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 397 247427 - 247479 + F 100 -12.9 -4.66264 | opp_overlap 247437 247438 247439, overlap 247471 TTTAGTTAATCAATT CATCATAAAAGCTGACCGCACTTTG TGA TAAAGTGCGGTCAAAATTTAAGATG TTTTTAAAAATTTTC TERM 398 247469 - 247437 - f 100 -11.4 -4.48741 | opp_overlap 247427, overlap 247438 247439 CAATTCATCATAAAA GCTGACCGCACTTT GTGAT AAAGTGCGGTCAAA ATTTAAGATGTTTTT TERM 399 247468 - 247438 - f 95 -14.9 -3.28522 | opp_overlap 247427, overlap 247437 247439 AATTCATCATAAAAG CTGACCGCACTTT GTGAT AAAGTGCGGTCAA AATTTAAGATGTTTT TERM 400 247467 - 247439 - f 100 -16.2 -2.5639 | opp_overlap 247427, overlap 247438 247437 ATTCATCATAAAAGC TGACCGCACTTT GTGAT AAAGTGCGGTCA AAATTTAAGATGTTT apbE 247554 - 248594 + | thiamine biosynthesis lipoprotein ApbE NTHI0261 248597 - 248857 + | hypothetical protein TERM 401 248923 - 248897 - f 84 -6.6 -5.08255 | opp_overlap 248901, overlap 248901 ATGTGCAAAATAAAA TTAACGGCAAAA TTA TTTTGCCGTTTT CTAATTCAATGACCA TERM 402 248901 - 248919 + F 100 -11.8 -4.55491 | opp_overlap 248897 248901 GCAAAATAAAATTAA CGGCAAAA TTA TTTTGCCG TTTTCTAATTCAATG TERM 403 248919 - 248901 - f 95 -11.8 -3.93251 | opp_overlap 248901, overlap 248897 GCAAAATAAAATTAA CGGCAAAA TTA TTTTGCCG TTTTCTAATTCAATG trmU 248932 - 250125 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 404 250163 - 250137 - T 71 -8.8 -3.02791 | opp_overlap 250143, overlap 250143 ATAAAACAAAGATGA CTAAAAGCGCGT AAA ATGCGCTTTTAA ACTATTTATTCAAAC TERM 405 250143 - 250157 + T 78 -7.8 -4.2243 | opp_overlap 250137 250143 CAAAGATGACTAAAA GCGCGT AAA ATGCGC TTTTAAACTATTTAT NTHI0263 250903 - 250169 - | hypothetical protein TERM 406 250224 - 250237 + g 71 -3.9 -4.89009 | opp_overlap 250224 TTGTCCCTGCGATAA GAAAA GAAC TTTTC TTTTTCGTTGAATGT TERM 407 250752 - 250773 + g 84 -8.7 -4.46212 | opp_overlap 250752 TTTTCGACTAATAAA GTGCGGTTA GTTT TTACCGCAC TTTTATCATCACCGA TERM 408 250773 - 250752 - G 83 -8.7 -4.24342 | opp_overlap 250752 TTTTCGACTAATAAA GTGCGGTTA GTTT TTACCGCAC TTTTATCATCACCGA rluD 251879 - 250905 - | 23S rRNA pseudouridine synthase D TERM 409 252013 - 251985 - H 76 -3.9 -5.33921 | AAATTAAGGAAAAAA CAATGCGTAAAAT AAA ATCTTTGGCATTG CTTGCCGTGGCAGCA NTHI0266 251987 - 252775 + | hypothetical protein NTHI0267 253336 - 252854 - | hypothetical protein pflA 254108 - 253368 - | pyruvate formate lyase-activating enzyme 1 TERM 410 253665 - 253685 + g 70 -9.1 -3.16534 | opp_overlap 253658, overlap 253664 AAATTCAAGGGTACG TTTATTGGG TAC CCCAATAAG ATTTTGATGAACTTG TERM 411 254169 - 254192 + r 100 -14 -3.65812 | opp_overlap 254169 TTAGTCTATAAAAAA TGAGCCTGAT TTAA ATCAGGCTCA TTATGTTCCCACCAA TERM 412 254192 - 254169 - R 100 -14 -5.26316 | opp_overlap 254169 TTAGTCTATAAAAAA TGAGCCTGAT TTAA ATCAGGCTCA TTATGTTCCCACCAA pflB 256551 - 254233 - | formate acetyltransferase focA 257437 - 256583 - | putative formate transporter TERM 413 257248 - 257259 + g 70 -5.8 -4.29907 | ATCCCCAAGGTGCGC CTGC ACTA GCAG TTTGTGTTGTCGTGT TERM 414 258614 - 258626 + G 70 -2.7 -5.13741 | AATGAAAGTGCGGTA GATTT TGT GAATC TTTTTGTTGAGTTGG NTHI0273 257942 - 258856 + | N-acetyl-D-glucosamine kinase TERM 415 258872 - 258894 + F 95 -8.5 -4.85782 | TTCAACAAACTAGTG GGGCGTATT CAAAT AATATGCCC TTTGTTTTTGAAAAA TERM 416 258922 - 258936 + F 91 -2.9 -6.07374 | opp_overlap 258912 258922, overlap 258912 AAATATTTAGAATAT TCTAA ATTTA TTAGA TTTTTTCTTTTTTGT NTHI0274 259035 - 260480 + | putative Na+/alanine symporter NTHI0275 261492 - 260665 - | esterase TERM 417 260892 - 260910 + g 79 -7.4 -4.62302 | GTTGAATGAGCGAGC TGGCATCA TAT TGCTGCCA TTTTTCACGATCTTC TERM 418 262809 - 262794 - g 76 -5.4 -5.01732 | AAGCTGCTGAAAAAA TAGGCA TTTC CGCCTA CACCTTACGCTTTTA NTHI0278 262760 - 263167 + | putative HTH-type transcriptional regulator tatA 263325 - 263612 + | Sec-independent protein translocase protein TatA/E tatB 263616 - 264176 + | sec-independent translocase TERM 419 264501 - 264515 + G 73 -6.4 -4.21471 | opp_overlap 264501 TATCAGCACGAAAAA CGGATG ATT TATCCG TTGTTATTTTCCAGT TERM 420 264515 - 264501 - g 74 -5.7 -4.78107 | opp_overlap 264501 TATCAGCACGAAAAA CGGAT GATTT ATCCG TTGTTATTTTCCAGT tatC 264186 - 264956 + | Sec-independent protein translocase protein TatC TERM 421 264978 - 264994 + F 82 -5.7 -5.29716 | opp_overlap 264978, overlap 264979 TAATTGTTAATAGTA TGGGAGC TTT GCCCCCG TTTTTATTATATTGA TERM 422 264979 - 264993 + F 70 -7 -3.76203 | opp_overlap 264978, overlap 264978 AATTGTTAATAGTAT GGGAGC TTT GCCCCC GTTTTTATTATATTG TERM 423 265139 - 265169 + F 93 -8.6 -4.71307 | GTCGTTTTTTATTTT TTATCTAATAAATA CGA TATTTTTTAGATAA TTTCTTTACTTTTTC TERM 424 266249 - 266275 + G 72 -8.8 -3.31144 | opp_overlap 266242 266241, overlap 266253 AGGTAAACGCCCTTG GGAAGTGCAA GTTGATA TTGCGCTTCC TTGTGCAACTCAAAA gdhA 265317 - 266666 + | glutamate dehydrogenase TERM 425 266715 - 266689 - T 100 -12.4 -4.13183 | opp_overlap 266689, overlap 266692 AAAAGTTAAACTAAA TAACCGCACTGT AAT AAAGTGCGGTTA TTTTTTAGGATGAAA TERM 426 266689 - 266715 + T 100 -12.4 -5.0538 | opp_overlap 266689 266692 AAAAGTTAAACTAAA TAACCGCACTGT AAT AAAGTGCGGTTA TTTTTTAGGATGAAA TERM 427 266712 - 266692 - T 93 -9.7 -4.15998 | opp_overlap 266689, overlap 266689 AGTTAAACTAAATAA CCGCACTGT AAT AAAGTGCGG TTATTTTTTAGGATG TERM 428 266762 - 266746 - T 100 -12.3 -4.46073 | opp_overlap 266746 266739 TTTGAATATAAGAAA GGCGACA TTT TGTCGCC TTAGATATTATTTAT TERM 429 266746 - 266762 + T 91 -12.3 -3.27213 | opp_overlap 266746, overlap 266739 TTTGAATATAAGAAA GGCGACA TTT TGTCGCC TTAGATATTATTTAT fur 267214 - 266774 - | ferric uptake regulation protein TERM 430 267041 - 267015 - G 82 -11 -3.28447 | overlap 267013 TGACGGATTACAATA TGTGCTTCATCA AAT TGATTAAGCACA CGATAAACTGTGGCT fldA 267767 - 267243 - | flavodoxin FldA NTHI0286 268727 - 267864 - | esterase/lipase seqA 268717 - 269322 + | replication initiation regulator SeqA TERM 431 269398 - 269374 - g 88 -9.3 -4.52857 | opp_overlap 269389 269393 ATTTCTCAGATAAAA TCGCTTTACGT ACT ACGCAGAGCGA TGCGCTTACTTGGAT TERM 432 270477 - 270467 - g 83 -4 -5.67063 | TTTACCACAAAAAAA CAAA GAA TTTG GTCAGCGTCCTGTCG menE 269325 - 270683 + | O-succinylbenzoic acid--CoA ligase TERM 433 270972 - 270958 - g 76 -2.8 -5.4756 | overlap 270959 AAGCTCAACAAAAAA TCAATG ATG CATTGC AAACAACATTAAGCC TERM 434 271631 - 271596 - g 81 -5.6 -5.28414 | gap 1, opp_overlap 271595, overlap 271597 CAACAAACAGAAAAA GCGAATTCATTAACTCA AGA TGAGTTAA-GAATGCGG AATATTTTAGATAGC TERM 435 271630 - 271597 - g 76 -9.1 -3.74608 | gap 1, opp_overlap 271595, overlap 271596 AACAAACAGAAAAAG CGAATTCATTAACTCA AGA TGAGTTAA-GAATGCG GAATATTTTAGATAG TERM 436 272343 - 272355 + G 74 -7.7 -3.98236 | GCCCTGTTATTAACT GCGTT TTT AACGC TTTCTAGTACACTTT NTHI0291 270711 - 274049 + | potassium efflux protein KefA aroC 274059 - 275132 + | chorismate synthase TERM 437 275153 - 275183 + F 76 -7.7 -3.92592 | gap 1, overlap 275158 GTATAAGATGGGAGT CTGTGCCTAGGGTA GGTA TACCCTAGGT-TAG TTTGATGTTACCCCT TERM 438 275158 - 275179 + F 95 -13.1 -3.61589 | overlap 275153 AGATGGGAGTCTGTG CCTAGGGTA GGTA TACCCTAGG TTAGTTTGATGTTAC TERM 439 275213 - 275233 + F 100 -9.7 -5.252 | opp_overlap 275208 275215, overlap 275215 TTTGGGATAAGTGGA AAGTTCCCC AAA GGGGAACTA TTTTTTCTAACCGTG TERM 440 275215 - 275231 + F 100 -12.3 -4.25873 | opp_overlap 275208 275215, overlap 275213 TGGGATAAGTGGAAA GTTCCCC AAA GGGGAAC TATTTTTTCTAACCG TERM 441 275231 - 275215 - f 95 -12.3 -3.69354 | opp_overlap 275213 275215, overlap 275208 TGGGATAAGTGGAAA GTTCCCC AAA GGGGAAC TATTTTTTCTAACCG TERM 442 275454 - 275431 - g 86 -8.2 -4.55798 | opp_overlap 275429 275427 275431 GATGGGAAAGCAAAA CCTATTGGTA GCTA TACCAATGGG TGTATTATTGGGGCG TERM 443 275431 - 275454 + G 79 -10.4 -3.26444 | opp_overlap 275431, overlap 275429 275427 GATGGGAAAGCAAAA CCTATTGGTA GCTA TACCAATGGG TGTATTATTGGGGCG mepA 275305 - 276165 + | penicillin-insensitive murein endopeptidase NTHI0295 276183 - 276950 + | hypothetical protein msbB 276997 - 277953 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase selD 278080 - 279051 + | selenide, water dikinase TERM 444 279129 - 279112 - T 89 -7.7 -5.24989 | opp_overlap 279112 279105 CCACATAGCAAAAAA CCTTGGA ATAT CCCAAGG TTTTTTAGATTATCA TERM 445 279112 - 279129 + T 88 -7 -5.1925 | opp_overlap 279112, overlap 279105 CCACATAGCAAAAAA CCTTGG AATATC CCAAGG TTTTTTAGATTATCA rplS 279510 - 279160 - | 50S ribosomal protein L19 trmD 280287 - 279547 - | tRNA (guanine-N(1)-)-methyltransferase TERM 446 280022 - 280047 + g 71 -8.4 -3.41051 | gap 1, opp_overlap 280029 AGTTTACGTCCTTGT GGCG-AAAGGT AAATC ACCTTTGCGCC TTCTCCTGCCGCTGC rimM 280852 - 280325 - | 16S rRNA-processing protein rpsP 281145 - 280897 - | 30S ribosomal protein S16 NTHI0302 281425 - 282210 + | hypothetical protein TERM 447 282262 - 282274 + G 70 -7.7 -3.66424 | overlap 282272 AAAATCAGCTACCTT TGCAC TCA GTGCA TTTGCGATGCTTTTC TERM 448 283072 - 283045 - g 70 -8.6 -3.17586 | overlap 283043 AGTAATCTATGAATA TCCACTTGAATT TAAA AATCCAAATGGA GAGCCTGTATTTGTA TERM 449 283805 - 283794 - g 74 -5.8 -4.67607 | overlap 283799 TCTTGAATAAACAAA CCCA ACAA TGGG AACCGATTGATGATA nadN 282233 - 284044 + | NAD nucleotidase TERM 450 284095 - 284055 - f 73 -4.3 -4.91084 | gap 2, opp_overlap 284066, overlap 284066 AATAAAATTGAAAAA TAGGCTAAAAATAGCGCGT ATTTA ACGCGCTATTTTT-GT-TA TTAGTCCTAGGTTTG TERM 451 284086 - 284066 - f 100 -11.2 -4.69464 | opp_overlap 284066, overlap 284055 AAAATAGGCTAAAAA TAGCGCGT ATTTA ACGCGCTA TTTTTGTTATTAGTC TERM 452 284066 - 284086 + F 100 -11.2 -5.31855 | opp_overlap 284066 284055 AAAATAGGCTAAAAA TAGCGCGT ATTTA ACGCGCTA TTTTTGTTATTAGTC aroK 284329 - 284871 + | shikimate kinase TERM 453 285673 - 285687 + G 72 -8.6 -3.34517 | overlap 285671 AGGTTATGGAAACTG GCTTCA TGG TGAAGC TGTTTCGACGGGAAT aroB 284891 - 285979 + | 3-dehydroquinate synthase TERM 454 286049 - 286023 - g 85 -9.4 -4.30448 | overlap 286025 AAACCTAAGTTAAAA CACCGTCCATTT TTA AAATGGGCGGGG GGAAAATTTCGTTTA TERM 455 286047 - 286025 - g 83 -10.6 -3.74381 | overlap 286023 ACCTAAGTTAAAACA CCGTCCATTT TTA AAATGGGCGG GGGGAAAATTTCGTT TERM 456 286333 - 286344 + G 73 -4.4 -4.94703 | CATCAACAGATCCTT TCGA ACGT TCGA TTATTTTTTTATATT dam 285981 - 286841 + | DNA adenine methylase NTHI0307_1 287806 - 287913 + | hypothetical protein TERM 457 287941 - 287953 + T 74 -3.3 -5.27335 | opp_overlap 287949 CTAATACTATTTCAT GACGA AGA TCGCC TTTTTCTTTAAAAAG TERM 458 287972 - 287949 - T 73 -9 -3.17229 | opp_overlap 287941, overlap 287968 ATTTCATGACGAAGA TCGCCTTTTT CTTT AAAAAGGCAA AAATAATGCCATTAA pgpB 288657 - 287932 - | phosphatidylglycerophosphatase B ribA 288703 - 289377 + | GTP cyclohydrolase II TERM 459 289399 - 289426 + T 100 -12.9 -5.64421 | opp_overlap 289368 289399 AGATATGTTAAAAAA GCCATACTGTT ATATTG AACAGTATGGC TTTTTTATTTAAACT TERM 460 289426 - 289399 - T 100 -12.9 -5.08169 | opp_overlap 289399, overlap 289368 AGATATGTTAAAAAA GCCATACTGTT ATATTG AACAGTATGGC TTTTTTATTTAAACT TERM 461 289487 - 289467 - T 76 -9.9 -2.92061 | overlap 289466 GAATAATCAAAAGAT TTTTTAGCA TAT TGCTAAAAA CGAGAAACCCCGTCT NTHI0310 291237 - 289693 - | putative ABC-type oligopeptide transport system, periplasmic component TERM 462 291088 - 291112 + g 90 -4.3 -5.76633 | opp_overlap 291090, overlap 291090 GCCACGTTTTAATTC AACTCGGTTAG ATT CTAATTGAGTA TTTTTTTGTGTCTCA TERM 463 291090 - 291110 + g 78 -6.9 -4.51477 | opp_overlap 291090, overlap 291088 CACGTTTTAATTCAA CTCGGTTAG ATT CTAATTGAG TATTTTTTTGTGTCT NTHI0311 291592 - 291230 - | hypothetical protein prlC 291711 - 293756 + | oligopeptidase A TERM 464 293771 - 293789 + F 93 -10.3 -3.94276 | opp_overlap 293766 293771 ATACGTCAAACTATA GGGCATG CACAA CATGCCC TTTCTCAAATATTTT TERM 465 293789 - 293771 - f 83 -11 -3.01765 | opp_overlap 293771, overlap 293766 ATACGTCAAACTATA GGGCATGC ACA ACATGCCC TTTCTCAAATATTTT TERM 466 294453 - 294437 - g 72 -2.1 -5.28983 | overlap 294431 294440 CGTAAAAGATAAAAA CGACCGC TTA ACGGCTG TTTTGAAAGGCGTGG TERM 467 295156 - 295185 + G 71 -4.5 -4.73108 | gap 1, opp_overlap 295158 CCCTTGCACCTAATC TATTCTACGGCA CCAGTAT TGCCGTA-AATA TTTTGGTTTTGTCCA hsdM2 293988 - 295532 + | putative type I restriction-modification system methyltransferase subunit TERM 468 295594 - 295536 - f 100 -19.1 -3.06694 | gap 1, opp_overlap 295539 295540, overlap 295535 295539 295569 ATTGAGGGGTAAAAT GTAGGGTGGGCTTCAGCCCACCATTTAC GATA ACAGGTGGTGGGCTAAAGCCCACCCTA- CGAGGAACAATAAAA TERM 469 295539 - 295558 + F 80 -9.2 -3.60098 | opp_overlap 295539 295535 295536, overlap 295540 GAGGGGTAAAATGTA GGGTGGGC TTCA GCCCACCA TTTACGATAACAGGT TERM 470 295592 - 295539 - f 100 -23.3 -2.75081 | opp_overlap 295539 295540, overlap 295535 295536 295569 GAGGGGTAAAATGTA GGGTGGGCTTCAGCCCACCATTTAC GATA ACAGGTGGTGGGCTAAAGCCCACCC TACGAGGAACAATAA TERM 471 295540 - 295557 + F 86 -12.7 -2.75844 | opp_overlap 295539 295535 295536, overlap 295539 AGGGGTAAAATGTAG GGTGGGC TTCA GCCCACC ATTTACGATAACAGG TERM 472 295959 - 295929 - g 79 -4.2 -5.29846 | AATGGCAAAGAAAAA TTAAATAATCGTTT TTT ATACCATTATTTAA CTAATATGAATTTCA hsdS2 295617 - 296789 + | putative type I restriction-modification system specificity protein TERM 473 297133 - 297112 - g 70 -6 -4.2237 | AAAGTAATTGGAAAA TTTCATCA TTATTG TGATGAAA AACTTATGCCTAAAT prrC 296791 - 297945 + | putative anticodon nuclease NTHI0317 297948 - 298946 + | DNA binding protein TERM 474 299941 - 299958 + G 75 -3.5 -5.31877 | CTTGCGACTGAACTT GATTTTA TTGA TAAAGTC TTTTTTGTGGTCGAT TERM 475 302000 - 301974 - g 84 -7.5 -4.74132 | gap 1, opp_overlap 301974 301973 ATATCTCACTAAAAA GCAGACAATTTT CCAA AAAATTG-CTGC ATTTGTAGAGAAATT hsdR2 298957 - 302040 + | putative type I restriction-modification system TERM 476 302169 - 302145 - T 100 -11.5 -5.18726 | opp_overlap 302145 TCGTGATAATAAAAA CAGCTCCAATT TAT ACTTGGAGCTG TTTTTATATCGATAA TERM 477 302145 - 302169 + T 100 -11.5 -4.99035 | opp_overlap 302145 TCGTGATAATAAAAA CAGCTCCAATT TAT ACTTGGAGCTG TTTTTATATCGATAA NTHI0319 302816 - 302187 - | hypothetical protein arcB 304871 - 303030 - | aerobic respiration control sensor protein ArcB TERM 478 303285 - 303302 + g 75 -2.1 -5.42862 | overlap 303274 TTGTTTGAATAAAGA TAAATTT TCTA AAATTTG TTTTTTTCCAAGTGT NTHI0322 305584 - 304940 - | uracil-DNA glycosylase TERM 479 305229 - 305248 + g 82 -9.4 -4.10161 | overlap 305223 AAACCTTGACGAGGT GGTAAATC ACCC GATTTACC TTTTCCAGGATAATA TERM 480 305749 - 305728 - R 89 -8.7 -4.4267 | opp_overlap 305725 305728 TCCCAAAAGCTAAAA CCCCATATC TTTC GACACGGGG TTCTTCTGTTTTTAT TERM 481 307755 - 307769 + r 80 -7.1 -4.58213 | overlap 307746 TGGTCTTCCGGCGAA CGGGT TTTTC ACCCG TTTTATCGTTACTTA TERM 482 309771 - 309754 - R 74 -9.1 -3.07291 | opp_overlap 309754 AAGGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC TERM 483 311337 - 311318 - R 74 -5.8 -4.61868 | TAGCTATACATAAAA CACTACTT AAAA AAGTAATG ATGAATTTTCAGTTA TERM 484 311499 - 311452 - R 85 -6.7 -5.32699 | gap 3, opp_overlap 311490 TTAAAGAGCAAAAAA TAACGACGCAC--TTG-GAAACTT AAA AAACTTCACAACAGTGCGTCGTTA TGTGCGGTGCATTAT birA 312544 - 311636 - | biotin--protein ligase guaB 312671 - 314137 + | inositol-5-monophosphate dehydrogenase TERM 485 314145 - 314162 + F 80 -6.9 -4.49756 | TGGGCTAATCTTTAA GGTGGGC TTTA GCCTGCC TTTTGCTGTTTAAAG TERM 486 315229 - 315216 - g 71 -3.1 -5.17576 | overlap 315217 GATGAATCGAAAAAA CTCAC TAAT GTGAA ATGGTTAGCACAAGG guaA 314247 - 315818 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 487 315864 - 315892 + T 82 -5.4 -5.27335 | gap 1, opp_overlap 315867, overlap 315867 TTTCAGTAACTTTAA TAA-GTGCGGTTA ATTT TTACCGCACTTTA TTTTTGTTTAAAAGC TERM 488 315888 - 315867 - T 77 -8.7 -3.68936 | opp_overlap 315864 315867 CAGTAACTTTAATAA GTGCGGTTA ATTT TTACCGCAC TTTATTTTTGTTTAA TERM 489 315867 - 315888 + T 95 -8.7 -5.12987 | opp_overlap 315867, overlap 315864 CAGTAACTTTAATAA GTGCGGTTA ATTT TTACCGCAC TTTATTTTTGTTTAA NTHI0327 316782 - 315880 - | hypothetical protein NTHI0328 316845 - 317351 + | putative transcriptional regulator TERM 490 317357 - 317378 + T 100 -13.1 -4.17417 | opp_overlap 317357 TATCTTATAGAACAA GTGCGGTAA ATTT TTACCGCAC TTTGTGTATGATTAA TERM 491 317378 - 317357 - T 95 -13.1 -3.88946 | opp_overlap 317357 TATCTTATAGAACAA GTGCGGTAA ATTT TTACCGCAC TTTGTGTATGATTAA nhaA 318592 - 317390 - | Na(+)/H(+) antiporter 1 TERM 492 318513 - 318499 - G 70 -2.8 -5.09173 | CAACAGCTGAAAAAA GCAATA ATA TACCGC CAGCAGATTCTAATT TERM 493 318688 - 318703 + H 71 -3.3 -5.0925 | TAAAATGCCATATAT TGTGA CAAAAT TCACA TTTTTAATTTTACGC brnQ 318780 - 320090 + | branched chain amino acid ABC transporter carrier protein TERM 494 320112 - 320169 + T 100 -27.9 -2.70354 | opp_overlap 320131 AAAGTGTTTTATTTA TCAGCCCTGTGCCGTAAAACTCCGTCC TTCA GGGCGGAGATATAAGGCACAGGGCTGA TAAATTTCTAACCGC TERM 495 320150 - 320131 - T 85 -9.2 -4.07568 | opp_overlap 320112 CCCTGTGCCGTAAAA CTCCGTCC TTCA GGGCGGAG ATATAAGGCACAGGG NTHI0332 320665 - 320198 - | hypothetical protein NTHI0333 321138 - 320692 - | hypothetical protein TERM 496 321932 - 321921 - g 70 -3 -5.06816 | ATGGCTGAACAAAAA CAAA GCCG TTTG GACTTAGTGGTTGCA TERM 497 323003 - 322990 - g 73 -6.7 -4.33808 | opp_overlap 322990 322989 TAAACCAAGCGAAAA GTGCA CGTA TGCAC ATTCTTGGTGTCATG pnp 321411 - 323540 + | polynucleotide phosphorylase/polyadenylase TERM 498 323589 - 323556 - f 89 -11.1 -3.68024 | opp_overlap 323557 323562, overlap 323557 323562 TCTTGGAATATAGAA TCAAAACTTGGTAGC ATTC GCTGCCAAGTTTTGT TGTTTTCCAACTTTT TERM 499 323557 - 323588 + F 100 -16.8 -4.2018 | opp_overlap 323556 323557 323562, overlap 323562 CTTGGAATATAGAAT CAAAACTTGGTAGC ATTC GCTGCCAAGTTTTG TTGTTTTCCAACTTT TERM 500 323588 - 323557 - f 95 -14.6 -2.80493 | opp_overlap 323557 323562, overlap 323556 323562 CTTGGAATATAGAAT CAAAACTTGGTAGC ATTC GCTGCCAAGTTTTG TTGTTTTCCAACTTT TERM 501 323562 - 323583 + F 100 -10.9 -5.093 | opp_overlap 323557 323556 323562, overlap 323557 AATATAGAATCAAAA CTTGGTAGC ATTC GCTGCCAAG TTTTGTTGTTTTCCA TERM 502 323583 - 323562 - f 89 -8.7 -4.55544 | opp_overlap 323562 323557, overlap 323557 323556 AATATAGAATCAAAA CTTGGTAGC ATTC GCTGCCAAG TTTTGTTGTTTTCCA TERM 503 324098 - 324112 + G 83 -8.6 -4.21989 | TGTAGGGCACTACCA TCTTGC TCA GCAAGA TTTCTTACAGTTCTA nlpL 323622 - 324566 + | lipoprotein NlpI TERM 504 324840 - 324858 + G 73 -7.4 -4.15854 | GTATGGCACAAACGG GTAGTGGT AAA ACCGCTGC TTTTGCACTGCCTTT TERM 505 325395 - 325381 - g 72 -5.7 -4.56597 | opp_overlap 325381 CGGCGTGCGTAAAAA CGAAG CTCTT CTTCG TTTCTTAGAAGTGGA deaD 324686 - 326527 + | cold-shock DEAD-box protein A-like protein TERM 506 326560 - 326580 + F 100 -15.5 -5.12068 | opp_overlap 326556 TTTTACATACACTTA GCCCCTTGA ACC TCAAGGGGC TTTTTATTGCCTATA TERM 507 327395 - 327366 - g 72 -7.2 -3.92075 | ACCGCGATCTACAAA CGGCTTTACTCA ATTTTA TGAATAATGCCG AAGAAACGGGACTTT TERM 508 327897 - 327880 - g 88 -3.4 -5.81032 | CAATGTGAAAAAAAA TCTGCC TTTATT AGCAGA AAAACGCTATTATTC NTHI0338 326705 - 328093 + | putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein NTHI0339 328098 - 328250 + | hypothetical protein NTHI0340 328680 - 328384 - | hypothetical protein TERM 509 328763 - 328709 - R 95 -14.8 -3.17723 | opp_overlap 328714 328715, overlap 328715 CTATTTTTAACCTAA GAAAAACCCGATTATAAAGTTTCT GTAATCA AAAAAATTTATAATCGGGCTTTTC AAATATTTTCCCTGG TERM 510 328757 - 328715 - R 100 -10.2 -5.13741 | opp_overlap 328714 328715, overlap 328709 TTAACCTAAGAAAAA CCCGATTATAAAGTTTCT GTAATCA AAAAAATTTATAATCGGG CTTTTCAAATATTTT NTHI0342 328946 - 328737 - | hypothetical protein TERM 511 328985 - 328964 - R 100 -12.3 -5.00884 | opp_overlap 328961 328964 ATTTTCCTTAAAAAA GCCGCGGAA GGAT TTCCACGGC TGGTGTACTATACAT TERM 512 328964 - 328985 + r 75 -10.1 -2.68612 | opp_overlap 328964, overlap 328961 ATTTTCCTTAAAAAA GCCGCGGAA GGAT TTCCACGGC TGGTGTACTATACAT arsC 329364 - 329014 - | putative arsenate reductase perM 329443 - 330492 + | putative permease PerM-like protein TERM 513 330575 - 330548 - T 95 -8.6 -5.76237 | opp_overlap 330548 TATATAAATAAAAAA TAGTTAATCGTA AATT TTCGATTAACTA TTTTTTTAATTTATT TERM 514 330548 - 330575 + T 100 -8.6 -5.77856 | opp_overlap 330548 TATATAAATAAAAAA TAGTTAATCGTA AATT TTCGATTAACTA TTTTTTTAATTTATT secF 331583 - 330606 - | preprotein translocase subunit SecF secD 333441 - 331591 - | preprotein translocase subunit SecD TERM 515 333489 - 333467 - R 93 -14.2 -2.52464 | overlap 333471 TTCTTTTCTAACGCA CAGAGCCACA ATG CGTGGCTCTG GAAAATAATTTAACG yajC 333804 - 333511 - | preprotein translocase subunit YajC NTHI0348 334133 - 333912 - | redox protein, regulator of disulfide bond formation NTHI0349 334648 - 334130 - | hypothetical protein TERM 516 334703 - 334669 - R 100 -13 -4.56597 | opp_overlap 334669 TTCCTTTGTTAAAAA GTGCGGTCAAAAAACG CTT CATTTTTCTACCGCAC TTTCATCAATTATGA TERM 517 334669 - 334703 + r 79 -8.6 -3.80858 | opp_overlap 334669 TTCCTTTGTTAAAAA GTGCGGTCAAAAAACG CTT CATTTTTCTACCGCAC TTTCATCAATTATGA tgt 335861 - 334713 - | queuine tRNA-ribosyltransferase TERM 518 335928 - 335909 - R 83 -5 -5.4505 | opp_overlap 335909 TTTTTGAACAAAAAA GCCTGT TAAAAAAT ACAGGC TTTGTGATATCATAT TERM 519 335968 - 336020 + r 93 -14.4 -2.77283 | gap 1, opp_overlap 335965 335979 335981, overlap 335981 TCTTTGAGCAGAGGC GGATCTACTAAGATAGTCCGCCAGT TGCC GCTGTCGGGCTAT-TTCGTAGATCC TGAGTTTGTTAATCA TERM 520 335981 - 336008 + r 75 -8.4 -3.77196 | opp_overlap 335965 335979 335981, overlap 335968 GCGGATCTACTAAGA TAGTCCGCCAGT TGCC GCTGTCGGGCTA TTTCGTAGATCCTGA TERM 521 336138 - 336168 + r 100 -9.9 -4.33819 | gap 1, opp_overlap 336143, overlap 336140 TTAGTAGTTGATGCC GA-CAAGAGATGGT TACC GCCATCTCTTGTTC TTTATTGTAGGTGCT TERM 522 336140 - 336165 + r 100 -12.7 -4.28115 | opp_overlap 336143, overlap 336138 AGTAGTTGATGCCGA CAAGAGATGGT TACC GCCATCTCTTG TTCTTTATTGTAGGT queA 337297 - 336206 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 523 337381 - 337367 - R 91 -4.2 -5.80364 | overlap 337369 ATCTCAAGAAAAAAA CTTTCC TCG GGGAAG ATAAAATAACCAGCA TERM 524 337388 - 337409 + r 90 -11.7 -3.69836 | opp_overlap 337388, overlap 337391 TCGGGGAAGATAAAA TAACCAGCA ATTA TGCTGGTTA TTTGGGATTAATTAT TERM 525 337409 - 337388 - R 100 -11.7 -4.66537 | opp_overlap 337388 337391 TCGGGGAAGATAAAA TAACCAGCA ATTA TGCTGGTTA TTTGGGATTAATTAT TERM 526 337391 - 337406 + r 82 -9 -3.97019 | opp_overlap 337388, overlap 337388 GGGAAGATAAAATAA CCAGCA ATTA TGCTGG TTATTTGGGATTAAT NTHI0353 337867 - 337421 - | hypothetical protein TERM 527 337974 - 337952 - R 82 -4.1 -5.46657 | opp_overlap 337952 TATTGGAATAAAAAA GGTGGGA TTTGATCTG CCCCACC TTGTTTATCAATAAA hap 342188 - 338010 - | adhesion and penetration protein Hap TERM 528 338548 - 338527 - G 76 -8.7 -3.73509 | opp_overlap 338536 ACACCAAATTGTAAA TCGCCCCAT TGAT ATTGGGCGA AACCCGACATCATCG TERM 529 340284 - 340305 + g 84 -10.9 -3.72984 | CACTTCGCCTTGAGG TCGCCCAAG CTCG TTTGGGCGA TTTAAATGATTGTAA TERM 530 342504 - 342455 - R 86 -10.9 -3.31054 | opp_overlap 342460, overlap 342460 AAACAATATCACTAA TAAAATAACCGCACTTTATGTGA GTTT TCTCTGAAAGTGCGGTTATTTTT TCTAAGGTTTTTCTA TERM 531 342460 - 342499 + r 100 -10.8 -5.28826 | opp_overlap 342455 342460 ATATCACTAATAAAA TAACCGCACTTTATGTGA GTTT TCTCTGAAAGTGCGGTTA TTTTTTCTAAGGTTT TERM 532 342499 - 342460 - R 100 -10.8 -4.74215 | opp_overlap 342460, overlap 342455 ATATCACTAATAAAA TAACCGCACTTTATGTGA GTTT TCTCTGAAAGTGCGGTTA TTTTTTCTAAGGTTT uvrA 345337 - 342506 - | excinuclease ABC subunit A TERM 533 343952 - 343962 + g 73 -4 -5.03747 | CAAACGCTCGCGGAT TTCT TTA AGAA TTTTTTCCGCAATTT TERM 534 345373 - 345388 + H 73 -7.6 -3.80595 | opp_overlap 345371 345366, overlap 345371 AATAAATGTAAATTT TGCGAT CATT ATCGCA TATTTTAATATCTGT TERM 535 345499 - 345442 - H 71 -3 -5.02476 | gap 1, opp_overlap 345442 345457, overlap 345457 AGATCTTTTAAAAAA TTTCAGGCA-AAATAACCGCACTTTTT TAGAT AAAAAATGAGGTTTTTTATGGCTGGAA TTAATAAAGTCATTA TERM 536 345457 - 345483 + H 70 -2.3 -5.28176 | opp_overlap 345457 345442, overlap 345442 TTTCAGGCAAAATAA CCGCACTTTTT TAGAT AAAAAATGAGG TTTTTTATGGCTGGA TERM 537 345571 - 345561 - g 73 -8.2 -3.62096 | TCGTACTATGCCAAA CGGC GAT GCCG TTGCAAATATCAGCG ssb 345490 - 345996 + | single-strand DNA-binding protein TERM 538 346049 - 346059 + T 84 -5.4 -5.50723 | opp_overlap 346049 AGAAGCTGAATAAAA GAGA GCT TCTC TTTTTATTTTACTAA TERM 539 346059 - 346049 - T 74 -5.4 -4.68705 | opp_overlap 346049 AGAAGCTGAATAAAA GAGA GCT TCTC TTTTTATTTTACTAA TERM 540 346077 - 346114 + T 100 -10.1 -4.51799 | opp_overlap 346081, overlap 346081 TTTATTTTACTAATT AAAAGGACTAAATCTAT GATT ATAGATTTAGTCCTTAA TTTTATAGCTTTAGT TERM 541 346081 - 346110 + T 100 -15.3 -3.76789 | opp_overlap 346081, overlap 346077 TTTTACTAATTAAAA GGACTAAATCTAT GATT ATAGATTTAGTCC TTAATTTTATAGCTT TERM 542 346110 - 346081 - T 100 -15.3 -4.45544 | opp_overlap 346081 346077 TTTTACTAATTAAAA GGACTAAATCTAT GATT ATAGATTTAGTCC TTAATTTTATAGCTT tonB 346968 - 346174 - | TonB TERM 543 346590 - 346602 + g 75 -3.3 -5.25805 | TGATTGGTTTCTTTT GTGGT TTA ACCTC TTTTTTAGGTTTATT exbD 347421 - 346978 - | biopolymer transport protein exbB 347877 - 347425 - | transport protein ExbB TERM 544 348003 - 348033 + r 90 -8.4 -5.09173 | overlap 348006 348032 AAATTTCTGAATTTT TTACCGCACTTT ATGTGGA AAAGTGCGGTTA TTTTTTGAAATATTA TERM 545 348006 - 348030 + r 100 -10.1 -4.63089 | overlap 348003 TTTCTGAATTTTTTA CCGCACTTT ATGTGGA AAAGTGCGG TTATTTTTTGAAATA bcp 348513 - 348046 - | thioredoxin-dependent thiol peroxidase dapA 348614 - 349510 + | dihydrodipicolinate synthase TERM 546 349518 - 349535 + F 76 -9.9 -2.84448 | opp_overlap 349518, overlap 349515 TGTTATAAAAATAAA GGGGTAA GTAA TTACCCC TCACTTTTATGTATT TERM 547 349535 - 349518 - f 100 -9.9 -4.96501 | opp_overlap 349515 349518 TGTTATAAAAATAAA GGGGTAA GTAA TTACCCC TCACTTTTATGTATT NTHI0363 349621 - 350250 + | lipoprotein NTHI0364 350440 - 350763 + | hypothetical protein TERM 548 350781 - 350823 + T 71 -8.6 -3.10597 | opp_overlap 350781, overlap 350780 350784 ACTGTAGATAAAATC TAATCTGGCAGTCTTATTGT AAA ATGATATGTCTGTCAGATTA ATTTTAGATGAAACA TERM 549 350904 - 350855 - T 75 -4.9 -4.84363 | gap 1, opp_overlap 350855 350859 350862 350869 350874, overlap 350864 350869 350897 TTAAATCACTAAAAA TTGAT-GATATTTAATAAAATATT AAT AATATTTTATTAAATATAGATTAA TTTAACCTATCGTGC TERM 550 350859 - 350899 + T 72 -9.5 -2.71765 | opp_overlap 350855 350864 350869 350897, overlap 350855 350862 350869 350874 ATCACTAAAAATTGA TGATATTTAATAAAATATT AAT AATATTTTATTAAATATAG ATTAATTTAACCTAT TERM 551 350862 - 350896 + T 89 -13.4 -2.6342 | opp_overlap 350855 350864 350869, overlap 350859 350855 350869 350874 ACTAAAAATTGATGA TATTTAATAAAATATT AAT AATATTTTATTAAATA TAGATTAATTTAACC TERM 552 350894 - 350864 - T 83 -11.6 -2.87261 | opp_overlap 350862 350859 350855 350869 350874, overlap 350855 350869 TAAAAATTGATGATA TTTAATAAAATATT AAT AATATTTTATTAAA TATAGATTAATTTAA TERM 553 351372 - 351362 - T 84 -4 -5.75538 | opp_overlap 351362 TCTAAAAAATAAAAA TCTT TAA AAGA TTAGTTAAAAAATAG lgtC 352415 - 351477 - | UDP-galactose--lipooligosaccharide galactosyltransferase orfM 353070 - 352483 - | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 554 352515 - 352529 + g 90 -2.8 -5.88565 | overlap 352526 AAATATTCAATGCCT TTGCTC GAT GAGAAA TTTTTTTCTTCTCAG kdkA 353807 - 353082 - | 3-deoxy-D-manno-octulosonic-acid kinase opsX 353884 - 354927 + | ADP-heptose--lipooligosaccharide heptosyltransferase I TERM 555 354971 - 354984 + F 71 -5.3 -4.58395 | TGGTTTTAATATAGC CAACT TGAA AGTTG TTTTTGGAAAGTAAG hxuC 355249 - 357378 + | heme-hemopexin utilization protein C hxuB 357454 - 359151 + | heme/hemopexin-binding protein B hxuA 359163 - 361928 + | heme/hemopexin-binding protein A TERM 556 362003 - 361958 - T 75 -7.1 -4.21402 | gap 1, opp_overlap 361963, overlap 361963 AGGTAAAAGCATAAA GCCAATCTGACAGACAT-CAAT TAA ATTGCATGCCTGTCAGATTTAT TAATAGCCACTGTTG TERM 557 361963 - 361998 + T 100 -11.4 -4.24342 | gap 1, opp_overlap 361963 361958 AAAGCATAAAGCCAA TCTGACAGACAT-CAAT TAA ATTGCATGCCTGTCAGA TTTATTAATAGCCAC TERM 558 361998 - 361963 - T 95 -13.6 -3.36128 | gap 1, opp_overlap 361963, overlap 361958 AAAGCATAAAGCCAA TCTGACAGACAT-CAAT TAA ATTGCATGCCTGTCAGA TTTATTAATAGCCAC folB 362380 - 362024 - | dihydroneopterin aldolase NTHI0373 362463 - 363062 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 559 363485 - 363469 - g 71 -8.1 -3.39842 | overlap 363467 GGATGTAAAAAACTA TAGTAAG CAG CTTACTA ACTATGTTGCAGATG TERM 560 363828 - 363816 - g 100 -7.7 -5.37593 | CGGTAAACGAAAAAA CGCAA AAG TTGCG TCAAACTAACCGCAC TERM 561 364319 - 364335 + G 82 -9.5 -4.07687 | opp_overlap 364318 364317 TCAAAAGAAAAGAGT TTGGCAA TTA TTGCCAA TTTTGAACAAGCCCT narQ 363104 - 364807 + | nitrate/nitrite sensor protein NarQ murB 364817 - 365842 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 562 366403 - 366389 - g 76 -7.2 -4.21275 | opp_overlap 366389 366388, overlap 366394 TCAACCTACGTAAAA CTAAAC AAC GTTTAG GTTGGTTCAATGAAA rpoH 365968 - 366813 + | RNA polymerase factor sigma-32 TERM 563 366862 - 366819 - T 76 -9.8 -2.95918 | opp_overlap 366819 366822 366833, overlap 366822 366828 366833 GAATTTTTAAATAAT TTAGAAAAAGAAAACCTGCT GATT AGCAGGTTTTTTATTTCTCA TTTAACCGTAATTTC TERM 564 366819 - 366862 + T 91 -12 -3.6003 | opp_overlap 366819 366822 366828 366833, overlap 366822 366833 GAATTTTTAAATAAT TTAGAAAAAGAAAACCTGCT GATT AGCAGGTTTTTTATTTCTCA TTTAACCGTAATTTC TERM 565 366859 - 366822 - T 83 -11.5 -2.71101 | opp_overlap 366819 366822 366833, overlap 366819 366828 366833 TTTTTAAATAATTTA GAAAAAGAAAACCTGCT GATT AGCAGGTTTTTTATTTC TCATTTAACCGTAAT TERM 566 366822 - 366859 + T 89 -13.7 -2.91873 | opp_overlap 366822 366819 366828 366833, overlap 366819 366833 TTTTTAAATAATTTA GAAAAAGAAAACCTGCT GATT AGCAGGTTTTTTATTTC TCATTTAACCGTAAT TERM 567 366853 - 366828 - T 100 -9.1 -4.94222 | opp_overlap 366822 366819 366833, overlap 366822 366819 366833 AATAATTTAGAAAAA GAAAACCTGCT GATT AGCAGGTTTTT TATTTCTCATTTAAC TERM 568 366848 - 366833 - T 95 -9 -5.35224 | opp_overlap 366822 366819 366833, overlap 366828 366822 366819 TTTAGAAAAAGAAAA CCTGCT GATT AGCAGG TTTTTTATTTCTCAT TERM 569 366833 - 366848 + T 95 -9 -5.73978 | opp_overlap 366833 366828 366822 366819, overlap 366822 366819 TTTAGAAAAAGAAAA CCTGCT GATT AGCAGG TTTTTTATTTCTCAT TERM 570 367132 - 367110 - T 100 -10.6 -4.12267 | ACCAGAAGAAGTAAA GCCCTGATTT TTT AATTCAGGGC ATAAACGATAAAATA djlA 368146 - 367280 - | DNA-J like membrane chaperone protein pyrE 368866 - 368225 - | orotate phosphoribosyltransferase rph 369606 - 368890 - | ribonuclease PH TERM 571 369665 - 369647 - R 93 -7.4 -5.4833 | opp_overlap 369647 CGATGTAATAAAAAA GCGCACTA TTC TAGCACGC TTTAGTTTTTATTTT TERM 572 369747 - 369715 - R 87 -10.8 -3.37975 | opp_overlap 369715 369722, overlap 369722 ATTGATTATTGATAA TAAAAAAGCAAGGT AAATA ACCTTGCTTTATTA ATTTGGTGGAGATAA TERM 573 369715 - 369747 + r 81 -10.8 -2.84051 | opp_overlap 369715 369722, overlap 369722 ATTGATTATTGATAA TAAAAAAGCAAGGT AAATA ACCTTGCTTTATTA ATTTGGTGGAGATAA TERM 574 369722 - 369740 + r 89 -8.9 -4.41302 | opp_overlap 369715 369722, overlap 369715 ATTGATAATAAAAAA GCAAGGT AAATA ACCTTGC TTTATTAATTTGGTG TERM 575 369740 - 369722 - R 95 -8.9 -5.56673 | opp_overlap 369722 369715, overlap 369715 ATTGATAATAAAAAA GCAAGGT AAATA ACCTTGC TTTATTAATTTGGTG gltX 371349 - 369907 - | glutamyl-tRNA synthetase TERM 576 371902 - 371869 - H 72 -6.2 -4.42464 | gap 1, opp_overlap 371877 AAGTGTTTAAATAAA CCGAAAAT-TTAAGG TTTTG CCTTAATATTATCGG GCGATTAGCTCAGTT TERM 577 373207 - 373196 - g 72 -5.8 -4.41206 | AATGATTTTAGAAAA GCAG CATC CTGC ACTAGAAAATGTAGA TERM 578 373553 - 373579 + G 73 -6.6 -4.25283 | opp_overlap 373553 TGCAAGTCAATTTAA GCAAGAACAAAA GTT TTTAGATCTTGC TTTTGCTGGAGGCGT lpt6 372099 - 373754 + | PE-tn-6--lipooligosaccharide phosphorylethanolamine transferase TERM 579 373765 - 373782 + T 76 -9.9 -2.79312 | GATAATTTTCTTAGA TCGAGCA TTAT TGCTCGA TCTGCTCGCCAATTT rbn 374581 - 373772 - | ribonuclease BN TERM 580 374089 - 374064 - G 88 -3.3 -5.72053 | CAAGTAAATAAAAAA GGCACAAAACT GAGC AATTTTAAGCC TAATGATAAATGTTC NTHI0386 375063 - 374578 - | hypothetical protein NTHI0387 375728 - 375066 - | hypothetical protein TERM 581 375509 - 375493 - G 72 -2.3 -5.24796 | opp_overlap 375494 375504, overlap 375494 375504 TCCATATAAGAAAAA TCTTTAT TTA ATAAAGT ATTTAATTCATTAAA TERM 582 375884 - 375874 - H 86 -2.6 -5.88197 | opp_overlap 375874 375879, overlap 375866 375864 TGAAAGAGAAAAAAA TTTT CTA AAAA TATTTTATTTCTTTT udp 375964 - 376722 + | uridine phosphorylase TERM 583 376760 - 376804 + T 91 -4.4 -5.84381 | AAAACTTTATTTTAT TCTGCACCTTAATTAGAT TTATTTTCT AACGAAGTAAGGTGCAGA TTTTTTTATTAATAA NTHI0390 378264 - 376948 - | metabolite transport protein TERM 584 377105 - 377079 - G 78 -7.4 -4.43877 | opp_overlap 377079 377082 377084 TAATTTTTAAAGAAA TCATTGCTGCAA TTG TTGCACCAATAA TTGATGCTAAATTAT TERM 585 378174 - 378164 - G 70 -8.2 -3.27177 | overlap 378162 378160 TTGAAAACTAATACA GCGG CAG CCGC ATAGATATAATAATC TERM 586 378220 - 378196 - G 82 -4.9 -5.39221 | opp_overlap 378218, overlap 378188 378197 ATAATAATCAAAAAA TTCGATTGCCG TAC CGACCATCGAG GCTAACGCCACTTTC TERM 587 378219 - 378197 - G 75 -8.4 -3.81092 | opp_overlap 378218, overlap 378188 378196 TAATAATCAAAAAAT TCGATTGCCG TAC CGACCATCGA GGCTAACGCCACTTT NTHI0391 379063 - 378320 - | acyl-CoA thioester hydrolase YfbB TERM 588 379003 - 379019 + g 72 -2.3 -5.24129 | GCGGTAGATTTTCAA TGACT TTTTGCC AGTCA TTTTTTGTACCAAGA TERM 589 379062 - 379051 - G 70 -3 -5.06414 | GTCCGTGAAGAAAAA TGAT GTTT ATCA TTGAAGGGATTATTG TERM 590 379115 - 379093 - R 84 -6.3 -5.06472 | gap 1, overlap 379095 379096 ATAGAAATAATAAAA TATGGCGGAC TAAA GCCCGCC-TA CAGAATATTTAAGCA TERM 591 379114 - 379095 - R 75 -7 -4.12859 | overlap 379093 379096 AGAAATAATAAAATA TGGCGGAC TAAA GCCCGCCT ACAGAATATTTAAGC TERM 592 379113 - 379096 - R 80 -10.5 -3.05275 | overlap 379095 379093 GAAATAATAAAATAT GGCGGAC TAAA GCCCGCC TACAGAATATTTAAG menD 380830 - 379124 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 593 380766 - 380781 + g 79 -9 -3.9009 | opp_overlap 380765 CAAACGTGAGAAACG CCTTGG CGCA CCAAGG TTTCTAAAATCACTT menF 382117 - 380846 - | menaquinone-specific isochorismate synthase TERM 594 381791 - 381767 - G 72 -2.1 -5.24531 | ATCTTTCACAAAAAA GGATACCAACG TGC CTTTATTATCC TGTTCAACAAGCATT TERM 595 381856 - 381867 + g 70 -5.8 -4.20783 | GCAAACCGCCTACCA GTGG AAAA CCAC TTTCTTCAATAAACT TERM 596 381933 - 381908 - G 75 -7.6 -4.1466 | opp_overlap 381908 381913 ATTTAACTGTGAAAA TGACTGCACT GCCCCA AGCGCAGCCA GTGCTTTTTCTTCAT TERM 597 381913 - 381937 + g 70 -2.8 -5.1356 | opp_overlap 381908, overlap 381908 ACTGTGAAAATGACT GCACTGCC CCAAGCGCA GCCAGTGC TTTTTCTTCATCACG TERM 598 383368 - 383354 - g 70 -2.8 -5.06414 | CTCCGCCAAGAAAAA GTGC TACTTGT GCAC GGTAAAGGATTTAAT aspC3 382274 - 383488 + | aminotransferase AlaT TERM 599 383535 - 383507 - f 77 -10.4 -2.52742 | opp_overlap 383513 383532, overlap 383513 ATGCTTTGACAACAT TACAAAGGGGAC TGAAT GTCCCCTTTTTA TCGATATAAATATAT TERM 600 383529 - 383513 - f 85 -9.4 -4.08571 | opp_overlap 383513, overlap 383507 TGACAACATTACAAA GGGGAC TGAAT GTCCCC TTTTTATCGATATAA TERM 601 383513 - 383529 + F 100 -9.4 -4.89852 | opp_overlap 383513 383507 TGACAACATTACAAA GGGGAC TGAAT GTCCCC TTTTTATCGATATAA TERM 602 383562 - 383585 + F 86 -8.3 -4.64861 | ATATTGCACTTTCCT TTTGCACTA CTATAA TAGTGCAAA TTTATTTTAGAGGCA mtr 383605 - 384861 + | tryptophan-specific transport protein sdaA 386337 - 384970 - | L-serine dehydratase TERM 603 386284 - 386310 + g 100 -13.8 -3.59262 | CATCGGACCGACCGT GTGGGAACTGGA TGG TCCAATTCCCAC TTTAAACATATCAAA sdaC 387610 - 386372 - | serine transporter TERM 604 387042 - 387027 - G 74 -7.6 -3.92075 | opp_overlap 387026 387027, overlap 387039 ATGGTTAGCCATAAA GTGGTT AAGA AACCAC CTGTTGTTGGAAATT TERM 605 387144 - 387160 + g 71 -3.7 -4.88407 | TAAACAAGCCATTCT GTGATTT TTA ACATCAC TTTTTCATTAAATAA TERM 606 387810 - 387790 - R 93 -7.6 -5.64274 | gap 1, opp_overlap 387790 TCAGCGACAAAAAAA TCGGTG-CG ATGA CGACACCGA TTGCGTATAAAAATA NTHI0399 390001 - 387833 - | putative cation-transporting ATPase TERM 607 389881 - 389899 + g 83 -3.8 -5.63517 | overlap 389885 CGGCAAAATTCACTC CCGCTTGT TGC ACAAATGG TTTTTTATTTAAAAC TERM 608 389960 - 389937 - G 75 -9.6 -3.31263 | opp_overlap 389937 ATGCGATTGGCACAA GATTGGCAGG TCAT CCCACCAATC TGAATTGAAATTTTT TERM 609 390252 - 390229 - H 79 -9.6 -3.31263 | opp_overlap 390229 ATGCGATTGGCACAA GATTGGCAGG TCAT CCCACCAATC TGAATTGAAATTTTT TERM 610 390543 - 390520 - H 79 -9.6 -3.31263 | opp_overlap 390520 ATGTGATTGGCACAA GATTGGCAGG CCAT CCCACCAATC TGAATTGAAATTTTT TERM 611 391160 - 391142 - g 72 -2.4 -5.30686 | AACAGTTACAAAAAA TGGTACAA AAA TTGCAGCA CTGGCACGACAGTTG NTHI0403 390841 - 391227 + | heavy metal dependent transcriptional regulator metJ 391558 - 391241 - | transcriptional repressor protein MetJ rho 391802 - 393064 + | transcription termination factor Rho TERM 612 393092 - 393114 + T 74 -5.6 -4.81551 | opp_overlap 393092 TTCTATGAAGAACAA GGGAAAAATA TTA TGTTTTCCCC TTTTTAATATCCGTA pilD 393810 - 393118 - | putative type 4 prepilin-like protein specific leader peptidase pilC 395027 - 393807 - | putative type IV pilin secretion protein TERM 613 394380 - 394368 - G 73 -4.1 -5.10154 | overlap 394370 ACTCAAAACGAAAAA TAGCA AAA TGCCA ATATTTTGCTTAAGG TERM 614 394910 - 394924 + g 70 -8.6 -3.06183 | GTAATTTGATGTGAG TAAGCC CGC GGCTTA TTAACTGAAAGTGCG pilB 396418 - 395024 - | putative type IV pilin secretion protein TERM 615 395386 - 395400 + g 83 -8.6 -4.29106 | TTTGAGCGGCACGTA GTGCAA TCC TTGCAC TTTCTTCATCTCGAA TERM 616 395733 - 395754 + g 71 -3.7 -5.00884 | overlap 395735 AGTTCTACAGGTTTA TTTTGTTGC GCTC GCAACACGA TTTTTTCGCCCCAAT TERM 617 396373 - 396345 - G 70 -7.4 -3.85698 | opp_overlap 396347, overlap 396346 TTGCGTTCCCATAAA TCTGGCGAGATC GTAAA GATCTCGCCATT TTGAGCGGTTACACG TERM 618 396372 - 396346 - G 79 -10.9 -2.91276 | opp_overlap 396347, overlap 396345 TGCGTTCCCATAAAT CTGGCGAGATC GTAAA GATCTCGCCAT TTTGAGCGGTTACAC TERM 619 396347 - 396371 + g 100 -14.4 -4.11484 | opp_overlap 396346 396345 GCGTTCCCATAAATC TGGCGAGATC GTAAA GATCTCGCCA TTTTGAGCGGTTACA pilA 396864 - 396415 - | Type IV pilin subunit protein TERM 620 397086 - 397136 + G 75 -2.2 -5.40072 | gap 3, opp_overlap 397094 397097, overlap 397098 TTCCTTATTGGTTAT TCAT-TATATTAGTCTGCCGCCAGA ACAA TTTGGCGGCGGA-T-ATGTGGATGA TTTTTTTCAAGGAAA TERM 621 397098 - 397125 + G 95 -14.2 -2.94551 | opp_overlap 397097 397094, overlap 397086 TATTCATTATATTAG TCTGCCGCCAGA ACAA TTTGGCGGCGGA TATGTGGATGATTTT ampD 396979 - 397539 + | N-acetyl-anhydromuranmyl-L-alanine amidase TERM 622 397562 - 397548 - f 78 -7.2 -4.38116 | opp_overlap 397548 397546, overlap 397533 TGTATAAAAATTAAA CATCAA ATT TTGATG TATTCTGTGTATTAT TERM 623 397779 - 397822 + F 76 -4 -5.28942 | gap 1, overlap 397783 TAAAAATTGTATTTT TTTACCGCACTTTCTTCCATT TTG AATGTGA-AAAGTGCGGTTTA TTTTTGTTTAAGATC TERM 624 397783 - 397818 + F 100 -9.2 -5.12987 | gap 1, overlap 397779 AATTGTATTTTTTTA CCGCACTTTCTTCCATT TTG AATGTGA-AAAGTGCGG TTTATTTTTGTTTAA TERM 625 398034 - 398069 + F 89 -7.6 -5.28166 | AAAATTGTGTATTTT TAACCGCACTTTAGGT TCAA ACCCAATGTGCAGTTA TTTTTATTGATTTTC TERM 626 398288 - 398259 - g 72 -2.1 -5.27477 | AGGCGAATTAAAAAA TCGTGAAGAACTT GTGG AAGTGATTCGCGA TTCAGAACAAAACGA TERM 627 398490 - 398512 + G 79 -8.4 -4.07568 | opp_overlap 398505 GATTGCCGATGCCGA TGACCGCGAT AAT ATCGTGGGCA TTTTGCACGCAAAAG TERM 628 398888 - 398903 + G 70 -4.7 -4.62203 | TAGATACCATTGGCG GTCTG ATTATG CAGAC TTTTGGTTATTTACC corC 398161 - 399060 + | magnesium and cobalt efflux protein CorC lnt 399044 - 400612 + | apolipoprotein N-acyltransferase NTHI0414 400662 - 401399 + | hypothetical protein NTHI0415 401396 - 401956 + | hypothetical protein ruvX 401956 - 402375 + | Holliday junction resolvase-like protein NTHI0419 403545 - 404756 + | prophage CP4-57-like integrase TERM 629 404797 - 404749 - T 77 -3.4 -5.54894 | gap 1, opp_overlap 404760 404764, overlap 404760 404764 AATGTATGAAAAAAA GTATCTAAAAATAAAGGGAATCA ATAC TGATTCCCTTTATTTACCTA-AC CTTTCTTCAGTAACT TERM 630 404787 - 404760 - T 100 -14.4 -4.7329 | opp_overlap 404760 404764, overlap 404749 404764 AAAAGTATCTAAAAA TAAAGGGAATCA ATAC TGATTCCCTTTA TTTACCTAACCTTTC TERM 631 404760 - 404787 + T 100 -14.4 -3.67588 | opp_overlap 404749 404760 404764, overlap 404764 AAAAGTATCTAAAAA TAAAGGGAATCA ATAC TGATTCCCTTTA TTTACCTAACCTTTC TERM 632 404783 - 404764 - T 100 -10.8 -4.89063 | opp_overlap 404764 404760, overlap 404760 404749 GTATCTAAAAATAAA GGGAATCA ATAC TGATTCCC TTTATTTACCTAACC TERM 633 404764 - 404783 + T 100 -10.8 -4.46112 | opp_overlap 404760 404749 404764, overlap 404760 GTATCTAAAAATAAA GGGAATCA ATAC TGATTCCC TTTATTTACCTAACC NTHI0420 405227 - 404793 - | hypothetical protein TERM 634 405589 - 405575 - g 70 -5.8 -4.26079 | GTAAATCAGGCAAAA TTGAAT TGG ATTCAA TTAAAGAAATTGACC NTHI0421 405340 - 405762 + | hypothetical protein TERM 635 405935 - 405923 - g 70 -4.9 -4.5528 | overlap 405931 CAAAACTAATGAAAA TGATA AAA TATCA CTAATCAATGATATA NTHI0422 405771 - 406544 + | hypothetical protein TERM 636 406949 - 406932 - f 87 -9.9 -3.92143 | opp_overlap 406932 TAAAATCGTCATAAA GAGCTCA AAAA TGAGCTC TTTTTTCATTTTATG TERM 637 406932 - 406949 + F 100 -9.9 -5.50313 | opp_overlap 406932 TAAAATCGTCATAAA GAGCTCA AAAA TGAGCTC TTTTTTCATTTTATG NTHI0423 407079 - 407270 + | hypothetical protein NTHI0424 407319 - 407471 + | hypothetical protein TERM 638 407535 - 407510 - T 93 -7.6 -5.75599 | opp_overlap 407513, overlap 407513 TAAAGTATAAAAAAA TAAGCCACCA AAAACA TGGTGGCTTT TATTTACTATCTTTT TERM 639 407532 - 407513 - T 100 -9.3 -4.9041 | opp_overlap 407513, overlap 407510 AGTATAAAAAAATAA GCCACCA AAAACA TGGTGGC TTTTATTTACTATCT TERM 640 407513 - 407532 + T 100 -9.3 -4.98061 | opp_overlap 407513 407510 AGTATAAAAAAATAA GCCACCA AAAACA TGGTGGC TTTTATTTACTATCT NTHI0425 408528 - 407638 - | hypothetical protein TERM 641 409049 - 409029 - H 72 -4.7 -4.72846 | opp_overlap 409029 409040, overlap 409031 409039 409040 GTACACACCTAAAAA TAGTAACCA ATT TGGTAACCA ATTATCAAAACATGA proC 409189 - 410004 + | pyrroline-5-carboxylate reductase TERM 642 410055 - 410069 + G 73 -4.2 -4.88295 | overlap 410057 TTTCTAGGTTACTAC TGCGCT TAT GGCGTA TTTTTGCCTTTCTTT TERM 643 410484 - 410502 + G 74 -5.2 -4.87328 | GGCGAGCAAAATATC GTGTGGAT TTT AACCGCAC TTTTATCTTTCTATA TERM 644 411104 - 411116 + G 78 -3.3 -5.37345 | overlap 411103 ATTTATGAGTATCAT TGCAG CTG CAGCA TTTTTTGTGATTCCA hcaT 410004 - 411170 + | putative 3-phenylpropionic acid transporter xerD 411201 - 412094 + | site-specific tyrosine recombinase XerD NTHI0429 412267 - 412554 + | hypothetical protein TERM 645 412552 - 412595 + T 93 -12.8 -3.36096 | opp_overlap 412563, overlap 412563 AAAAGTTATAGTGAG TAATTAAAAAAGCCTTATTG AGTA CAATAAGGCTTTTTTAGTGG TTAAATTTATCTAGT TERM 646 412563 - 412584 + T 100 -11.7 -5.2189 | opp_overlap 412563, overlap 412552 TGAGTAATTAAAAAA GCCTTATTG AGTA CAATAAGGC TTTTTTAGTGGTTAA TERM 647 412584 - 412563 - T 100 -11.7 -5.30155 | opp_overlap 412563 412552 TGAGTAATTAAAAAA GCCTTATTG AGTA CAATAAGGC TTTTTTAGTGGTTAA ruvB 413613 - 412606 - | Holliday junction DNA helicase B TERM 648 412967 - 413001 + g 74 -10 -2.74514 | opp_overlap 412973, overlap 412970 412973 412976 CGAGGCGTGCCTCGT GAACGACGAGCCACCT CAA AAGCGGCTTGTTGTTC TAATTCAAGATTTAA ruvA 414235 - 413621 - | Holliday junction DNA helicase motor protein TERM 649 414297 - 414282 - R 82 -5.4 -5.31091 | opp_overlap 414282 TAGAATAAAATAAAA CTGGAC GAAC ATCCAG TTAAATTTTTAATCT ruvC 414870 - 414298 - | Holliday junction resolvase TERM 650 414595 - 414578 - G 72 -7.1 -3.96999 | overlap 414576 GCATATTCAAAAACA GGTAAAT CATT ATTTACC GCTGCAACAATCGCC TERM 651 414904 - 414886 - R 85 -6.8 -5.25803 | opp_overlap 414886, overlap 414888 AATTTCTATAAAAAA TAGGTAAT TAA ATTACCCA TTTATTGCATTATTA TERM 652 414902 - 414888 - R 75 -7.2 -4.25873 | opp_overlap 414886, overlap 414886 TTTCTATAAAAAATA GGTAAT TAA ATTACC CATTTATTGCATTAT NTHI0433 415657 - 414917 - | hypothetical protein ntpA 416142 - 415669 - | dATP pyrophosphohydrolase TERM 653 415941 - 415908 - G 71 -3.9 -4.87291 | gap 1, opp_overlap 415908 CATTGCAATCAAAAA GCGCGGT-GGAATTTT CCG AAATTTCTAACCGCAC TTCTTCCCATAGCTC TERM 654 416121 - 416142 + g 74 -8.7 -3.42809 | opp_overlap 416122, overlap 416122 ATTGCATCATTAAAA ATGCGGTCA AATC TGACCGCAC TTCATTCCTAATATT TERM 655 416122 - 416141 + g 85 -12.2 -2.64962 | opp_overlap 416122, overlap 416121 TTGCATCATTAAAAA TGCGGTCA AATC TGACCGCA CTTCATTCCTAATAT TERM 656 416141 - 416122 - G 100 -12.2 -4.77036 | opp_overlap 416122 416121 TTGCATCATTAAAAA TGCGGTCA AATC TGACCGCA CTTCATTCCTAATAT aspS 417930 - 416164 - | aspartyl-tRNA synthetase TERM 657 416349 - 416327 - G 73 -8.4 -3.5936 | opp_overlap 416317 416345, overlap 416318 416339 GTTAAACGGTCTAAA CCGAATGCTA AAC CAGCATGCGG TGGAGTACCGAATTT NTHI0436 418149 - 418667 + | hypothetical protein TERM 658 419336 - 419311 - g 74 -6.1 -4.68424 | GAAGTGAGCCAAAAA CGCACCGCACT TGAA AATGTGATGCG TACAGATTCTATTGA NTHI0438 418720 - 419445 + | hypothetical protein NTHI0439 419538 - 419774 + | hypothetical protein NTHI0440 419771 - 420175 + | nucleic acid-binding protein gloA 420242 - 420649 + | lactoylglutathione lyase TERM 659 420679 - 420700 + F 100 -11.7 -5.26119 | opp_overlap 420682 TTATTGTATTTTTAA TAACGTAGG GATT CCTACGTTA TTTTATTTTTAAGAG TERM 660 420697 - 420682 - f 77 -9 -3.63515 | opp_overlap 420679 TTGTATTTTTAATAA CGTAGG GATT CCTACG TTATTTTATTTTTAA rnt 420723 - 421412 + | ribonuclease T TERM 661 421595 - 421620 + F 100 -15.5 -5.34857 | opp_overlap 421592 421591 ATAATAAAAATCTTA CCCCTCGGAAG GCAA CTTTCGAGGGG TTTTGTTTTATTTAC NTHI0443 421726 - 423078 + | hypothetical protein TERM 662 423103 - 423088 - f 85 -10.4 -3.47227 | opp_overlap 423088 CTTTAACGATTATAA TCCCCC ACTT GGGGGA TTTTTTTATGACTGT TERM 663 423088 - 423103 + F 100 -10.4 -5.65177 | opp_overlap 423088 CTTTAACGATTATAA TCCCCC ACTT GGGGGA TTTTTTTATGACTGT NTHI0444 423111 - 423698 + | primosomal replication protein N TERM 664 423730 - 423713 - T 93 -7.1 -5.73978 | opp_overlap 423713 ATTAGAAATAAAAAA CTAATTC TTCC GAATTAG TTAGCTCGTAAAAAT TERM 665 423969 - 423941 - T 89 -7.6 -5.26918 | gap 1, opp_overlap 423941 ACAGCTTATAAAAAA TGCCTTTCCTATT TATG AAC-GGAAAGGCA TTTTTGTTGAATGAA TERM 666 423941 - 423969 + T 84 -6.7 -5.10461 | opp_overlap 423941 ACAGCTTATAAAAAA TGCCTTTCCTATT TAT GAACGGAAAGGCA TTTTTGTTGAATGAA efp 424615 - 424049 - | elongation factor P NTHI0447 424653 - 425669 + | lysine 2,3-aminomutase TERM 667 425707 - 425719 + F 74 -6.3 -4.44915 | overlap 425698 TTTTTCGCCACACTT TTGAG CTT CTCAA TTTTGTGGCTAATTA TERM 668 426611 - 426599 - g 70 -2.6 -5.15634 | CAGCCGATGAAAAAA GCGG TAGAG CCAC AAGTTGCGCATAAAG oapA 425768 - 427063 + | opacity associated protein TERM 669 427071 - 427084 + F 100 -8.1 -5.93252 | AAAAATAATTTTTTG GGCGA GTAA TCGCC TTTTTTCTTTTTAAG oapB 427122 - 427526 + | opacity associated protein OapB TERM 670 427918 - 427906 - g 70 -7.7 -3.57106 | opp_overlap 427906 427902 427898, overlap 427902 GGCAACGGAAACTAA CGTTG AGC CAACG TTGCGTCTTTTTGAA recO 427529 - 428239 + | DNA repair protein RecO TERM 671 428983 - 428993 + G 77 -8.2 -3.88601 | opp_overlap 428982 428979 ATTGAACAAATCTAT GGCG ATG CGCC TTATTATCAATTTTC TERM 672 429242 - 429226 - g 81 -6.5 -4.89393 | GAAATGGTACAAAAA GCGGC GCAAAAT GCCGC AAGAAACCAAATCAA rumA 428239 - 429555 + | 23S rRNA 5-methyluridine methyltransferase TERM 673 431330 - 431297 - g 72 -7.1 -3.9122 | gap 1, overlap 431298 TATTCGTTTAAATAA CTTAATCAATTT-CTT GCA AAGTAAATTGATTAAA GTGACTGCTGAAGAA relA 429633 - 431864 + | GTP pyrophosphokinase dgkA 431879 - 432235 + | diacylglycerol kinase TERM 674 432240 - 432273 + F 91 -11.9 -3.89524 | opp_overlap 432246 432247, overlap 432241 432247 TATTCTTCTAACCCT CCAAAAGTGCGGTAA GTTT TTACCGCATTTTTGA TTTATCCAATCACGT TERM 675 432241 - 432272 + F 100 -15.4 -2.93393 | opp_overlap 432246 432247, overlap 432240 432247 ATTCTTCTAACCCTC CAAAAGTGCGGTAA GTTT TTACCGCATTTTTG ATTTATCCAATCACG TERM 676 432267 - 432246 - f 75 -7.3 -4.11484 | opp_overlap 432241 432240 432247, overlap 432247 TCTAACCCTCCAAAA GTGCGGTAA GTTT TTACCGCAT TTTTGATTTATCCAA TERM 677 432247 - 432266 + F 100 -10.8 -5.04601 | opp_overlap 432246 432247, overlap 432241 432240 CTAACCCTCCAAAAG TGCGGTAA GTTT TTACCGCA TTTTTGATTTATCCA TERM 678 432266 - 432247 - f 83 -10.8 -3.06569 | opp_overlap 432247 432241 432240, overlap 432246 CTAACCCTCCAAAAG TGCGGTAA GTTT TTACCGCA TTTTTGATTTATCCA mogA 432318 - 432911 + | molybdenum cofactor biosynthesis protein glnB 432913 - 433251 + | nitrogen regulatory protein P-II NTHI0457 433251 - 434297 + | hypothetical protein TERM 679 434334 - 434313 - T 89 -8.7 -4.61199 | opp_overlap 434314, overlap 434314 ATTTTAGAGATAAAA GTGCGGTGA ATTT TCACCGCAT TTTTTTATGATAAGT TERM 680 434333 - 434314 - T 90 -12.2 -3.35996 | opp_overlap 434314, overlap 434313 TTTTAGAGATAAAAG TGCGGTGA ATTT TCACCGCA TTTTTTTATGATAAG TERM 681 434314 - 434333 + T 100 -12.2 -5.67063 | opp_overlap 434314 434313 TTTTAGAGATAAAAG TGCGGTGA ATTT TCACCGCA TTTTTTTATGATAAG priA 436531 - 434339 - | primosome assembly protein PriA TERM 682 435621 - 435639 + g 70 -7.4 -3.85698 | AACAATGCCGATCTC GTGCCAAT CAC AATGGCAC TTTGTCCAGAGCGGG TERM 683 436188 - 436209 + g 74 -8.7 -3.60792 | opp_overlap 436188 GTAATTCGCCAAAAA GTGCGGTCA TTTT TTACCGCAC TTTCGCCGTTACGCA TERM 684 436209 - 436188 - G 86 -8.7 -4.59853 | opp_overlap 436188 GTAATTCGCCAAAAA GTGCGGTCA TTTT TTACCGCAC TTTCGCCGTTACGCA TERM 685 436516 - 436498 - G 70 -8.1 -3.2624 | overlap 436494 CAAATAAGCGAGGAA GCGGCAC AGCCA GTGCCAC TCGGACAATTTTCAT trmB 436616 - 437356 + | tRNA (guanine-N(7))-methyltransferase NTHI0460 437441 - 437785 + | hypothetical protein TERM 686 437824 - 437798 - f 79 -8.8 -3.8698 | opp_overlap 437799, overlap 437799 437801 TAATCTAAATTGAAA GCAGCATAACAA AAA TTGCTATGCTGT TTTGTTTTAATCCCT TERM 687 437823 - 437799 - f 86 -12.3 -2.91465 | opp_overlap 437799, overlap 437798 437801 AATCTAAATTGAAAG CAGCATAACAA AAA TTGCTATGCTG TTTTGTTTTAATCCC TERM 688 437799 - 437823 + F 100 -10.1 -5.13722 | opp_overlap 437798 437799 437801 AATCTAAATTGAAAG CAGCATAACAA AAA TTGCTATGCTG TTTTGTTTTAATCCC TERM 689 437821 - 437801 - f 74 -9.1 -3.00017 | opp_overlap 437799, overlap 437799 437798 TCTAAATTGAAAGCA GCATAACAA AAA TTGCTATGC TGTTTTGTTTTAATC napF 437991 - 438521 + | ferredoxin-type protein NapF napD 438514 - 438795 + | NapD TERM 690 438890 - 438862 - g 100 -13.1 -3.75665 | CGAGACTTTATGAAA GCCAATGCGGCTA TGG CAGCCGCAACGGC AGCGGGGCTAACCAT TERM 691 439771 - 439761 - g 71 -6.8 -4.08042 | opp_overlap 439764, overlap 439759 439763 439764 TCCATTAGAAAAAGA CACG AAT CGTG CAACAGCTGGGAAAA TERM 692 441188 - 441178 - g 73 -6.8 -4.20516 | opp_overlap 441178 441171, overlap 441174 CGCGGACGTAATAAA CCAC CTC GTGG CTTAGTATTTACCAC napA 438817 - 441315 + | nitrate reductase napG 441369 - 442208 + | quinol dehydrogenase periplasmic component TERM 693 442261 - 442276 + G 76 -2.5 -5.46706 | AGAAAAATGGGGCTG GTGGT ATGCAA ACCGC TTTTTGTTTTGGCGT napH 442208 - 443071 + | quinol dehydrogenase membrane component napB 443068 - 443520 + | diheme cytochrome C NapB napC 443535 - 444137 + | cytochrome C-type protein NapC TERM 694 444149 - 444182 + T 89 -11.3 -3.48063 | opp_overlap 444149, overlap 444142 GTGATTTTCTAAAAA TAGGCTGAAAAAA TACCGCAC TTTTTTCAGCCTA TTATAAATTTGGGTA TERM 695 444182 - 444149 - T 100 -11.3 -4.58395 | opp_overlap 444149 444142 GTGATTTTCTAAAAA TAGGCTGAAAAAA TACCGCAC TTTTTTCAGCCTA TTATAAATTTGGGTA TERM 696 444254 - 444211 - T 86 -4.7 -5.626 | gap 1, opp_overlap 444211 TAGTTTATAAAAAAA TCTGCACTTTAATTCGCTGA TTTAT TCAGCCT-TTAAGGTGCAGA TTAATTATATTTTCT adk 444941 - 444297 - | adenylate kinase TERM 697 444991 - 445023 + r 82 -7.8 -4.46926 | opp_overlap 444991 TACTGATAAAGCATA GTGCGGTCAAATTT TTTAT AATTTTTACCGCAC TTTTATACTGAGCTG lic3C 446303 - 445026 - | putative integral membrane signal transducer protein TERM 698 446396 - 446370 - R 71 -5.2 -4.57569 | opp_overlap 446362 446370 GGATTTTTGTAAAAA TTAGGGGATT TTTAATC ATTCCCCTAA TGTTTAGCATTCTTC galE 447461 - 446445 - | UDP-glucose 4-epimerase lic3A 448596 - 447634 - | CMP-Neu5Ac--lipooligosaccharide alpha 2-3 sialyltransferase TERM 699 448386 - 448408 + g 72 -9.4 -2.74523 | opp_overlap 448371, overlap 448371 448383 TAAAAAATACCTTTT TTATTTTCTT GCC AAGAAAATAA TGATCTTCAAAATAA NTHI0473 448995 - 449717 + | putative ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component NTHI0474 449714 - 450451 + | putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component TERM 700 451381 - 451364 - g 70 -2.7 -5.10461 | TTTATGCAACAAAAA GGCTT AATTCCAA AAGCC TTAGCGTTGAAAGAA NTHI0475 450473 - 451417 + | putative ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component TERM 701 451622 - 451612 - g 79 -4 -5.42514 | overlap 451604 GTATAAAGCAAAAAA TTTC GCT GAAA TGGAAATACCTCGCA NTHI0476 451427 - 452074 + | putative transcription activator TERM 702 452158 - 452138 - T 100 -14.1 -3.54653 | ATTGTGATTATATAA CCCCTCTTT GAG AAAGAGGGG GGAAGGAAAATTATC hfeD 452984 - 452169 - | putative ABC-type chelated iron transport system, permease component TERM 703 452224 - 452214 - G 86 -5.4 -5.55769 | TGCTATAACAAAAAA TGCA GCT TGCA GAAGAATGATACAAG hfeC 453825 - 452977 - | putative ABC-type chelated iron transport system, permease component hfeB 454749 - 453829 - | putative ABC-type chelated iron transport system, ATPase component TERM 704 454281 - 454299 + g 79 -4.4 -5.24129 | opp_overlap 454281 454280 TTTGTTGTGCTAAAG CGCGGGCT AAA AACACGCG TTTTTTCTGCCCGCC hfeA 455630 - 454749 - | putative periplasmic chelated iron binding protein TERM 705 455860 - 455873 + H 77 -5.3 -4.87786 | ATAAAGGTATTTTCT GTCAT TAGA ATGAC TTTTTATCAAATTAA NTHI0482 455936 - 456400 + | hypothetical protein TERM 706 456445 - 456472 + T 100 -11.4 -5.59879 | opp_overlap 456445 AAATCAACTAAAAAA CGCGAGATAAAA CAAC TCTTATCTCGCG TTTTTTGTGTTTATG TERM 707 456472 - 456445 - T 100 -13.6 -5.33921 | opp_overlap 456445 AAATCAACTAAAAAA CGCGAGATAAAA CAAC TCTTATCTCGCG TTTTTTGTGTTTATG pbpG 457370 - 456492 - | penicillin-binding protein 7 homolog precursor TERM 708 457453 - 457434 - H 79 -9.4 -3.41222 | overlap 457432 CTGTAATTGGAAATA TTTGCGAT CTAG ATCGCAAA AAAGTGCGGTAAGAT TERM 709 457794 - 457755 - g 74 -10.2 -2.78049 | overlap 457752 AGTTAGTAAAATGGA TTTATCATTTTGGCGAAG ATAA CTTCGACAATATGACAAA CATTAATAAAAAATT TERM 710 458522 - 458512 - g 76 -4 -5.22794 | overlap 458501 AGAAGTATTAAAAAA TACA CCT TGTA AAATTAATTTAATTC NTHI0485 457595 - 458767 + | hypothetical protein TERM 711 458773 - 458806 + F 75 -8.4 -3.7331 | gap 1, overlap 458772 458774 458775 458805 AGTTAATTAATATTC TA-GGCATGTGAATT AATCA AGTTCACATGCCCTA TGTTTTCATACAAAT TERM 712 458774 - 458804 + F 79 -9.1 -3.44672 | overlap 458773 458772 458775 GTTAATTAATATTCT AGGCATGTGAATT AATCA AGTTCACATGCCC TATGTTTTCATACAA TERM 713 458775 - 458803 + F 86 -12.6 -2.66321 | overlap 458774 458773 458772 TTAATTAATATTCTA GGCATGTGAATT AATCA AGTTCACATGCC CTATGTTTTCATACA TERM 714 458974 - 458988 + G 80 -10 -3.66883 | opp_overlap 458973 458972 AGCTGCCGCCAAAGC GCGAGT GGA ACTCGC TTTGAGCTATCTTCA NTHI0486 458867 - 459406 + | hypothetical protein NTHI0487 459478 - 460389 + | hypothetical protein TERM 715 460864 - 460845 - g 71 -3.5 -5.07486 | overlap 460847 GATTTGCAAGAAAAA TATGGCG AACCAA CGCCAGA AGCCTTGTTAGAATC TERM 716 461478 - 461458 - g 93 -9.7 -4.95876 | overlap 461459 AATTAGAAGCAAAAA TTCGTGCGA AAG TCGCACGAC AAGATCCAAAAAACA TERM 717 461477 - 461459 - g 100 -13.2 -3.55899 | overlap 461458 ATTAGAAGCAAAAAT TCGTGCGA AAG TCGCACGA CAAGATCCAAAAAAC ispG 460398 - 461504 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase hisS 461514 - 462785 + | histidyl-tRNA synthetase TERM 718 463125 - 463097 - g 73 -3.9 -5.17576 | GATGAAGCGAAAAAA GCCACTCAAAAAC AAG ATTTTTCAGCAGC AGAAGCAAATTTAAA TERM 719 463279 - 463289 + G 71 -6.8 -4.07885 | CGAAAGTTTTAATGC TCGC AAA GCGA TTTTAACGGGCGATA NTHI0490 462803 - 463417 + | hypothetical protein TERM 720 463449 - 463422 - T 95 -8.5 -5.06103 | opp_overlap 463425, overlap 463425 ACAACCTTTAAAAAA TAATACCCGCA TCAAAG TGCGGGTATTT TTTCAATCAAATTTC TERM 721 463446 - 463425 - T 100 -10.2 -4.62085 | opp_overlap 463425, overlap 463422 ACCTTTAAAAAATAA TACCCGCA TCAAAG TGCGGGTA TTTTTTCAATCAAAT TERM 722 463425 - 463446 + T 100 -10.9 -5.09225 | opp_overlap 463422 463425 ACCTTTAAAAAATAA TACCCGCAT CAAA GTGCGGGTA TTTTTTCAATCAAAT NTHI0491 463662 - 463468 - | hypothetical protein fdx 464003 - 463662 - | ferredoxin, 2Fe-2S hscA 465902 - 464043 - | chaperone protein HscA TERM 723 465386 - 465368 - G 70 -8.2 -3.25234 | overlap 465357 465366 TCAATAAACGTAATA CATTTAGC CCA GCTAAACG CGCAGCATCTTTAGT NTHI0494 466607 - 465921 - | hypothetical protein TERM 724 466627 - 466656 + r 79 -8.7 -3.889 | gap 1 TTATTTATTCACATC TCGTAGGGGCAAAT TAC ATTTGCCCCCA-GA TTTAATCTAATTCAA hscB 467182 - 466658 - | co-chaperone HscB NTHI0496 467518 - 467195 - | hypothetical protein TERM 725 467542 - 467563 + r 89 -8.7 -4.64598 | opp_overlap 467533 467543, overlap 467543 CAAACACCGCTAAAA ATGCGGTCA AAAT TGACCGCAC TTTTTCACATGATTA TERM 726 467562 - 467543 - R 100 -12.2 -4.62904 | opp_overlap 467542 467543, overlap 467533 AAACACCGCTAAAAA TGCGGTCA AAAT TGACCGCA CTTTTTCACATGATT TERM 727 467543 - 467562 + r 90 -12.2 -3.38036 | opp_overlap 467533 467543, overlap 467542 AAACACCGCTAAAAA TGCGGTCA AAAT TGACCGCA CTTTTTCACATGATT nifU 467956 - 467576 - | scaffold protein TERM 728 468007 - 467987 - R 70 -6.9 -3.76492 | TTCAATTCTAGTAAA TGCCATTGT CAG ATAATGGCA ACTAAATATTAGTGA nifS2 469236 - 468016 - | cysteine desulfurase TERM 729 468509 - 468495 - G 70 -8.6 -3.17212 | CTACGATTTGATGAA CAGGTA ATG TACCTG AACGCATGCCACGTT NTHI0499 469749 - 469297 - | hypothetical protein NTHI0500 470527 - 469802 - | tRNA/rRNA methyltransferase TERM 730 470944 - 470909 - R 78 -7 -4.40993 | opp_overlap 470914, overlap 470914 TACAAACGATGAAAA CAAAACAGAATCCAAT AAAA AATGGATCCTGTTTTT CAAGTATTAGAAATA TERM 731 470914 - 470939 + r 72 -4.7 -4.66953 | opp_overlap 470914 470909 ACGATGAAAACAAAA CAGAATCCAAT AAAA AATGGATCCTG TTTTTCAAGTATTAG TERM 732 470939 - 470914 - R 88 -6.9 -5.14626 | opp_overlap 470914, overlap 470909 ACGATGAAAACAAAA CAGAATCCAAT AAAA AATGGATCCTG TTTTTCAAGTATTAG pal 471428 - 470967 - | outer membrane protein P6 precursor TERM 733 471386 - 471373 - G 73 -8.1 -3.55487 | overlap 471385 TTAGATGAACTACAA GCTGC TAAT GCAGC TACAGAACCTGCAAC tolB 472735 - 471452 - | translocation protein TolB TERM 734 472196 - 472208 + g 78 -3.3 -5.40072 | opp_overlap 472194 ACGAACTTCATAAGG TTGCG AAC CGCCA TTTTTTTGCACAACA tolA 474003 - 472777 - | cell envelope integrity inner membrane protein TolA TERM 735 473426 - 473442 + g 72 -8 -3.85165 | TGTTTTGCTTTTTGA GCAGCA ATTTC TGCTGC TTTCGCTTTAGCCTC tolR 474438 - 474019 - | colicin uptake protein TolR TERM 736 474465 - 474496 + r 100 -10.3 -4.37991 | opp_overlap 474463, overlap 474469 AAATTTTAACTTATT TTTACCGCACTTT TTCTTC AAAGTGCGGTCAA TTTTCCCTATTTTTA TERM 737 474469 - 474492 + r 81 -11.1 -2.77519 | opp_overlap 474463, overlap 474465 TTTAACTTATTTTTA CCGCACTTT TTCTTC AAAGTGCGG TCAATTTTCCCTATT tolQ 475195 - 474509 - | hypothetical protein NTHI0506 475622 - 475212 - | thioesterase TERM 738 475569 - 475534 - G 100 -8.4 -5.40072 | gap 1 GCTCGTTCAAAAAAA TGCAAATAGCG-AGCGT GAT ACACTACGCCACCTGCA TCAGTATCTTCATAA TERM 739 476536 - 476526 - g 76 -5.4 -5.00884 | opp_overlap 476526 AGTGCGCGTAAAAAA GCAT TAA ATGC TGATTTGGTTGTAGT dinG 475947 - 477869 + | ATP-dependent helicase NTHI0508 477882 - 478592 + | hypothetical protein NTHI0509 478617 - 479168 + | starvation-inducible outer membrane lipoprotein TERM 740 479231 - 479220 - g 73 -3 -5.32608 | opp_overlap 479220 AAAAAATGGAAAAAA TTTG GTTT CAAA ATTATCCAGAAGGTT TERM 741 479759 - 479729 - g 71 -3.3 -5.10077 | gap 1, overlap 479731 479747 AAATATGTGAAAAAA CT-CGTGCCGAAAT ATAA ATTACCGCACGCAG TAACATTCCGTGAAG lcfA 479210 - 480898 + | long-chain-fatty-acid--CoA ligase TERM 742 480924 - 480907 - f 85 -8.5 -4.21098 | opp_overlap 480907 ACATTAATGTCAAAA TGGGATA GCAA TATCCCA TTTTTGTTCTTTTTA TERM 743 480907 - 480924 + F 95 -8.5 -5.51353 | opp_overlap 480907 ACATTAATGTCAAAA TGGGATA GCAA TATCCCA TTTTTGTTCTTTTTA TERM 744 481910 - 481900 - g 83 -4 -5.60993 | CTCGTTATAAAAAAA CAAT TCG ATTG TTACAAGAAAAAGTG rnd 480954 - 482096 + | ribonuclease D TERM 745 482102 - 482134 + T 95 -13.6 -3.4574 | opp_overlap 482107, overlap 482107 ACTTAAATAAATATA AAAAAGCGTTGAGC AAATA GCTCAACGCTTTTA GTTTTTACTCGTAGA TERM 746 482107 - 482129 + T 100 -13.5 -4.80167 | opp_overlap 482107, overlap 482102 AATAAATATAAAAAA GCGTTGAGC AAATA GCTCAACGC TTTTAGTTTTTACTC TERM 747 482129 - 482107 - T 100 -13.5 -5.61913 | opp_overlap 482107 482102 AATAAATATAAAAAA GCGTTGAGC AAATA GCTCAACGC TTTTAGTTTTTACTC NTHI0512 484007 - 482139 - | acyltransferase TERM 748 482946 - 482935 - G 70 -3 -5.13648 | opp_overlap 482935 TAAATATAAAGAAAA CTTT GTTT AAAG TTTAGTTTCGATTTT TERM 749 484063 - 484033 - R 76 -6.8 -4.64423 | opp_overlap 484031 484033 TAATAAAAATATAAA CCGCACTTTGTTCT ATG AGTCAAAAGTGCGG TAATTTTTTGTGTGT NTHI0513 485172 - 484081 - | translation-associated GTPase pth 485804 - 485220 - | peptidyl-tRNA hydrolase NTHI0516 485987 - 486295 + | hypothetical protein NTHI0517 486298 - 487512 + | hypothetical protein xseA 487514 - 488833 + | exodeoxyribonuclease VII large subunit TERM 750 488891 - 488921 + F 85 -4.1 -5.61277 | ACTTCTAAAAAAGAA TGCTATGACTGTT GAATA AATAATCATGGCA TTTTGTTTTTTTGTG TERM 751 488963 - 488975 + F 91 -2.7 -6.00086 | overlap 488953 ACTCTCAACAAAAAG TGGAA ACC TTCTA TTTTTTTTGTAGTCT adpP 489010 - 489663 + | ADP-ribose pyrophosphatase icc 489673 - 490497 + | cyclic 3',5'-adenosine monophosphate phosphodiesterase TERM 752 490556 - 490499 - T 73 -7.3 -3.90574 | gap 1, opp_overlap 490501 490503, overlap 490500 AAGAAGGATATTAAA TTTTGTGGACGTTTTAAAAATCACTTTC ATA GTAAGC-ATTTTTAAAACGTCCACTATT CTAACCCAACAAAAG TERM 753 490555 - 490500 - T 81 -10.8 -2.9326 | gap 1, opp_overlap 490501 490503, overlap 490499 AGAAGGATATTAAAT TTTGTGGACGTTTTAAAAATCACTTTC ATA GTAAGC-ATTTTTAAAACGTCCACTAT TCTAACCCAACAAAA TERM 754 490501 - 490554 + T 89 -12.1 -3.28712 | gap 1, opp_overlap 490500 490499, overlap 490503 GAAGGATATTAAATT TTGTGGACGTTTTAAAAATCACTTTC ATA GTAAGC-ATTTTTAAAACGTCCACTA TTCTAACCCAACAAA TERM 755 490503 - 490552 + T 95 -14.7 -3.21276 | gap 1, opp_overlap 490500 490499, overlap 490501 AGGATATTAAATTTT GTGGACGTTTTAAAAATCACTTTC ATA GTAAGC-ATTTTTAAAACGTCCAC TATTCTAACCCAACA NTHI0521 490882 - 490595 - | hypothetical protein ompP1 491079 - 492455 + | long-chain fatty acid ABC transporter TERM 756 492504 - 492482 - f 81 -7.8 -4.35885 | opp_overlap 492482 ATTTAGCATAATAAA GCACACTT CCACACC AAGTGTGC TTTTCTTTTATAAAA TERM 757 492482 - 492504 + F 88 -7.8 -5.18371 | opp_overlap 492482 ATTTAGCATAATAAA GCACACTT CCACACC AAGTGTGC TTTTCTTTTATAAAA ogt 492501 - 493070 + | methylated-DNA--protein-cysteine methyltransferase mutH 493067 - 493738 + | DNA mismatch repair protein mesJ 495038 - 493746 - | putative cell cycle protein MesJ TERM 758 494961 - 494999 + g 79 -6.7 -4.7153 | gap 1, opp_overlap 494962, overlap 494962 TACAGTGGAATCTAA ACCACCACTCAAGGCGAT AAGA AAC-CCTTGAGCGGTGGC TTTTTGGAGTTGTTT TERM 759 494998 - 494962 - G 90 -12.4 -3.76393 | gap 1, opp_overlap 494961 494962 ACAGTGGAATCTAAA CCACCACTCAAGGCGAT AAGA AAC-CCTTGAGCGGTGG CTTTTTGGAGTTGTT TERM 760 494962 - 494998 + g 79 -10.2 -3.41291 | gap 1, opp_overlap 494962, overlap 494961 ACAGTGGAATCTAAA CCACCACTCAAGGCGAT AAGA AAC-CCTTGAGCGGTGG CTTTTTGGAGTTGTT TERM 761 495200 - 495180 - R 100 -9.7 -5.22312 | opp_overlap 495180 ATTTAGATCAAAAAA GAGCGGCAA AAA TCACCGCTC TTTTAGAAAGTTAGT accA 496162 - 495215 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha znuB 497036 - 496251 - | high-affinity zinc uptake system membrane protein ZnuB znuC 497842 - 497036 - | ABC transporter ATP-binding protein TERM 762 497931 - 497945 + H 70 -4.3 -4.66163 | opp_overlap 497931, overlap 497924 ATGTCGAATATTTAA GCATT TGAAT AATGC TTTTTCCATAGGAAT TERM 763 498811 - 498797 - g 85 -2.8 -5.79588 | opp_overlap 498797 CGAAAACTAAAAAAA GGCA CTCAATT TGCC ATTTTAGTTTCTCGT NTHI0532 498014 - 499441 + | metalloprotease TERM 764 499452 - 499471 + F 80 -6.4 -4.79756 | overlap 499455 CTTAGCGATATAAAG TGCGGTCA AAAA TGGTCGCA TTTTTACCTTATGTA tyrR 499556 - 500512 + | transcriptional regulatory protein TyrR TERM 765 500536 - 500571 + T 100 -17.8 -3.22448 | opp_overlap 500536, overlap 500528 500526 TTTGAAATGGAAAAA GTGCGGTTGAAATTTC CTAA GAATTTTCAACCGCAC TTAATAAATATTGAT TERM 766 500571 - 500536 - T 100 -17.8 -4.81249 | opp_overlap 500528 500526 500536 TTTGAAATGGAAAAA GTGCGGTTGAAATTTC CTAA GAATTTTCAACCGCAC TTAATAAATATTGAT hfq 500883 - 500608 - | RNA-binding protein Hfq rluC 501969 - 500974 - | 23S rRNA pseudouridylate synthase C TERM 767 503954 - 503980 + G 74 -8.8 -3.53012 | opp_overlap 503927 503944 503960, overlap 503956 503960 TTGAACAACCAGCGG TTGAAAGTGCAG TAG TTGCACTTTCTA TTTCAGAAGCAGCCC TERM 768 503956 - 503978 + G 84 -11.4 -3.34398 | opp_overlap 503960, overlap 503954 503960 GAACAACCAGCGGTT GAAAGTGCAG TAG TTGCACTTTC TATTTCAGAAGCAGC TERM 769 503960 - 503974 + G 73 -6.4 -4.32857 | opp_overlap 503960, overlap 503956 503954 AACCAGCGGTTGAAA GTGCAG TAG TTGCAC TTTCTATTTCAGAAG rne 502315 - 505170 + | ribonuclease E TERM 770 505217 - 505184 - f 100 -10.5 -5.67529 | opp_overlap 505186, overlap 505186 AATCAAAAATAAAAA TAGAATTGACGTAAC CAAA ATTACGTCAATTCTT TTTATTTTATAAATA TERM 771 505186 - 505215 + F 100 -12.4 -5.54907 | opp_overlap 505184 505186 TCAAAAATAAAAATA GAATTGACGTAA CCAAAA TTACGTCAATTC TTTTTATTTTATAAA TERM 772 505215 - 505186 - f 100 -13.1 -4.43511 | opp_overlap 505186, overlap 505184 TCAAAAATAAAAATA GAATTGACGTAAC CAAA ATTACGTCAATTC TTTTTATTTTATAAA TERM 773 505582 - 505563 - g 75 -6.4 -4.38712 | overlap 505581 GGGACGCTTAGAAAA CGTGCGTT TTAA AACTCACG AAGCCTCTTTCGGTG NTHI0539 505402 - 505614 + | hypothetical protein TERM 774 505638 - 505693 + F 100 -15.2 -5.4505 | gap 1, opp_overlap 505641 ATTTAGTTTTCTATT TAAGCGGTCAAATTCTTCTCATTATTT GCA AAATGA-GGGAAAAATTTGACCGCTTG TTTTTTCTTGAAAAG TERM 775 505690 - 505641 - f 87 -12.5 -3.05596 | gap 1, opp_overlap 505638 TAGTTTTCTATTTAA GCGGTCAAATTCTTCTCATTATTT GCA AAATGAGG-GAAAAATTTGACCGC TTGTTTTTTCTTGAA TERM 776 506532 - 506545 + G 80 -5.9 -5.03314 | GGCTGTTTATTGAGT GCCGT GTGT GCGGC TTTTTTAGCGGTAAG thiM 505938 - 506735 + | hydroxyethylthiazole kinase TERM 777 507367 - 507381 + G 75 -6.4 -4.48877 | opp_overlap 507364 507366, overlap 507371 ACGCCGCATACACAC GGTACG GGC TGTACC TTTTCTGCCTGTTTA thiD 506728 - 507537 + | phosphomethylpyrimidine kinase thiE 507548 - 508228 + | thiamine-phosphate pyrophosphorylase TERM 778 508394 - 508418 + G 70 -8 -3.64283 | gap 1 TTTAGCACTTACTTT TATTGCTCGCC CTTT GG-GAGCAATA TTGTTCGGGCATTTC NTHI0543 508212 - 509516 + | metabolite transporter NTHI0544 509629 - 509528 - | hypothetical protein TERM 779 511040 - 510993 - g 100 -13.2 -3.45776 | gap 1, opp_overlap 511002 511007, overlap 511007 TTAAATGTACCACAA GATATTAACTTAAATTACGCTTT ATT AATGCGTAATTT-AGTTAATACC AATACAAGAAACCCA TERM 780 511002 - 511032 + G 74 -9.2 -3.15544 | opp_overlap 510993 511007, overlap 511007 CCACAAGATATTAAC TTAAATTACGCTTT ATT AATGCGTAATTTAG TTAATACCAATACAA TERM 781 511027 - 511007 - g 70 -6.9 -3.80189 | opp_overlap 511002 511007, overlap 510993 AGATATTAACTTAAA TTACGCTTT ATT AATGCGTAA TTTAGTTAATACCAA TERM 782 511007 - 511027 + G 72 -6.9 -3.95584 | opp_overlap 511007 510993, overlap 511002 AGATATTAACTTAAA TTACGCTTT ATT AATGCGTAA TTTAGTTAATACCAA NTHI0545 509685 - 511064 + | putative protease srmB 512417 - 511098 - | ATP-dependent RNA helicase SrmB NTHI0547 512463 - 513185 + | O-methyltransferase TERM 783 513209 - 513181 - f 84 -11.9 -2.75963 | opp_overlap 513187, overlap 513187 ACTTTTATTTGAAAT TTTAAAGGGGAAA TCG TTTCCCCTTTAAT CATACACTATCTAAA TERM 784 513187 - 513203 + F 90 -10.9 -3.79251 | opp_overlap 513187 513181 ATTTGAAATTTTAAA GGGGAAA TCG TTTCCCC TTTAATCATACACTA TERM 785 513203 - 513187 - f 90 -10.9 -3.71917 | opp_overlap 513187, overlap 513181 ATTTGAAATTTTAAA GGGGAAA TCG TTTCCCC TTTAATCATACACTA TERM 786 513655 - 513680 + F 71 -3.3 -5.08367 | overlap 513676 CTAGTTTCTTTCACT TCTTGTTTATC ACGA GGAAAACGAGA TTTTTCGTTTCTATT TERM 787 514209 - 514198 - g 71 -4.4 -4.78572 | CGTGAAGCAAGAAAA TCCA CACT TGGA TGTAAAAATTCTCAT TERM 788 514869 - 514893 + G 74 -5.7 -4.74103 | opp_overlap 514869, overlap 514871 AACAAGTAGAAATTA TTGTTGGCGAT AAA GTCGCAAACGA TTTTTACATTCCACC TERM 789 514994 - 514982 - g 70 -4.9 -4.56597 | CGTTTCTGTGAAAAA TTTGA GAC TCAAA TTGAAAATGGTCAGC pssA 513968 - 515335 + | phosphatidylserine synthase fadR 516106 - 515381 - | fatty acid metabolism regulator TERM 790 516276 - 516303 + G 79 -4.9 -5.34365 | TTTCTTGGGGCAAGT CCAGAATGGTA CAAACT TGCCATTGTGG TTTTTCTTATTATAA TERM 791 516823 - 516797 - g 83 -11 -3.43104 | opp_overlap 516797 516796, overlap 516795 AATTATTGAACAACA GCACGAAATCTT AGA AAAATTCCGTGC ATTCTTACGTAGTTT nhaB 516207 - 517775 + | sodium/proton antiporter dsbB 517785 - 518318 + | disulfide bond formation protein B TERM 792 518343 - 518324 - T 89 -6.4 -5.64006 | opp_overlap 518326, overlap 518326 ATTTAACTAAAAAAA TACGGTGA AATT TCACCGTT TTTTTTATTACATTA TERM 793 518326 - 518341 + T 100 -9 -6.11243 | opp_overlap 518324 518326 TTAACTAAAAAAATA CGGTGA AATT TCACCG TTTTTTTTATTACAT TERM 794 518341 - 518326 - T 89 -9 -4.45473 | opp_overlap 518326, overlap 518324 TTAACTAAAAAAATA CGGTGA AATT TCACCG TTTTTTTTATTACAT glmS 520205 - 518373 - | D-fructose-6-phosphate amidotransferase TERM 795 519500 - 519512 + g 72 -7.7 -3.72051 | TTTCAAGATTAGACT CGTGA ATT TCACG TTTAGCCTTATTACC TERM 796 519877 - 519894 + g 70 -6.3 -4.21194 | opp_overlap 519877 CGAGATTTTAATAAT TCGCGAA GTTC TTCGTGA TTTTCAATAATACCG TERM 797 520294 - 520276 - R 100 -6.7 -6.19302 | gap 1, opp_overlap 520275 520276 ACACAATAAAAAAAA CCCTG-CG CAAT CGACAGGG CTTCATTTCATTGAT hupA 520728 - 520318 - | DNA-binding protein HU NTHI0555 521320 - 520730 - | hypothetical protein TERM 798 520869 - 520880 + g 73 -3 -5.22258 | ACATCAAGTTCTGTT TGAA TATC TTCA TTTTCTTTTAGTTTA nudC 522150 - 521356 - | NADH pyrophosphatase TERM 799 522137 - 522149 + g 73 -2.7 -5.28176 | CCAAAATCATCTTGT TGAAG TAT TTTCA TTTTTTCTCCATAAA TERM 800 522167 - 522192 + r 85 -10.5 -3.45634 | opp_overlap 522167, overlap 522160 522170 TTTTCTCCATAAAAA TAACCGCACTT TCAA AAGTGCGGTCA TTATAAATCTTCTTT TERM 801 522192 - 522167 - R 100 -12.7 -4.82901 | opp_overlap 522167 522160 522170 TTTTCTCCATAAAAA TAACCGCACTT TCAA AAGTGCGGTCA TTATAAATCTTCTTT TERM 802 522170 - 522189 + r 84 -12.2 -2.86426 | opp_overlap 522167, overlap 522167 522160 TCTCCATAAAAATAA CCGCACTT TCAA AAGTGCGG TCATTATAAATCTTC orfG 522813 - 522217 - | putative DNA uptake protein comF 523575 - 522889 - | competence protein F comE 524925 - 523588 - | competence protein E TERM 803 524660 - 524672 + g 77 -6.3 -4.7153 | opp_overlap 524660 TCATCTTTATTCAAA GTAAG ATG CTTAC TTTTTGCGATTATTT comD 525348 - 524935 - | competence protein D comC 525866 - 525345 - | competence protein C TERM 804 525823 - 525811 - G 74 -4.8 -4.96848 | opp_overlap 525811 CCGTGCACATAAAAA GGCT GACTT AGCC ATTTTCCAAAAGGAG comB 526369 - 525863 - | competence protein B comA 527167 - 526370 - | competence protein A TERM 805 527039 - 527025 - G 71 -3.6 -5.00884 | overlap 527026 AGCTGTTGTAAAAAA CGATTT TTA AAATCA CGATCATTAACAAAA TERM 806 527927 - 527914 - g 71 -6.7 -4.09685 | CTTTATTCGCTAAAA CGTTC AGAA GAACG TCGCAATGTGGTGCT mrcA 527266 - 529860 + | penicillin-binding protein 1A TERM 807 529888 - 529907 + F 89 -11.4 -3.44146 | opp_overlap 529886, overlap 529906 TTTAGTGTGAAATCG GGCGAGTC AATT GGCTCGCC TTCGTTATAAAACAA TERM 808 530362 - 530343 - g 71 -3.6 -4.9218 | overlap 530325 TAGCGACGACAAAAA TGTCAC CGTAAAAT GTGACA ATGGTTTTCAACAAG NTHI0568 529933 - 530778 + | hypothetical protein TERM 809 530809 - 530842 + F 100 -14.1 -4.46581 | opp_overlap 530809 CTAAACACCACTAAA TTTCACCGCACTT GACTTCAA AAGTGCGGTGAAA TTTTCTGAGATTTTA TERM 810 530842 - 530809 - f 100 -14.1 -3.86835 | opp_overlap 530809 CTAAACACCACTAAA TTTCACCGCACTT GACTTCAA AAGTGCGGTGAAA TTTTCTGAGATTTTA TERM 811 531020 - 531008 - g 81 -3.4 -5.52096 | AAATGCAAGAAAAAA TGCA AAAAA TGCA GGAAGAAATCGCACA NTHI0569 530911 - 531276 + | hypothetical protein recR 531407 - 532009 + | recombination protein RecR topB 532025 - 533980 + | DNA topoisomerase III secG 534089 - 534430 + | preprotein translocase subunit SecG TERM 812 534609 - 534565 - T 74 -6.6 -4.34345 | opp_overlap 534575, overlap 534575 TATACAGCACTAAAA GCATTACAAAGCCTTGATTC TACTG AAATCAAGGCTTTTTTATTC CCTATACTCCACTAT TERM 813 534599 - 534575 - T 85 -9.4 -4.05816 | opp_overlap 534575, overlap 534565 TAAAAGCATTACAAA GCCTTGATTC TACTG AAATCAAGGC TTTTTTATTCCCTAT TERM 814 534575 - 534599 + T 95 -8.7 -5.49234 | opp_overlap 534565 534575 TAAAAGCATTACAAA GCCTTGATT CTACTGA AATCAAGGC TTTTTTATTCCCTAT TERM 815 534880 - 534920 + T 95 -12.7 -3.82218 | opp_overlap 534884, overlap 534884 AATACATCCATAACT AAAAGGACTAAGCCCTGTA GAT TACAGAGCTTAGTCCTTGA TTTCATAGTCTAACT TERM 816 534916 - 534884 - T 100 -20.1 -4.50058 | opp_overlap 534880 534884 CATCCATAACTAAAA GGACTAAGCCCTGTA GAT TACAGAGCTTAGTCC TTGATTTCATAGTCT TERM 817 534884 - 534916 + T 100 -17.9 -3.58564 | opp_overlap 534884, overlap 534880 CATCCATAACTAAAA GGACTAAGCCCTGTA GAT TACAGAGCTTAGTCC TTGATTTCATAGTCT TERM 818 534936 - 534948 + T 72 -4.9 -4.67173 | TTTCATAGTCTAACT TTTTC AAT GAAAA TTATTTTTTACATTC TERM 819 534968 - 534984 + T 76 -6.5 -4.50298 | opp_overlap 534968 534967, overlap 534965 TTTTTACATTCAAAG TGCGGTA TTA TTCCGCA TTGTTTTTCGATTTA fruA 536645 - 534975 - | PTS system, fructose-specific IIBC component TERM 820 535104 - 535092 - G 79 -9.1 -4.1523 | opp_overlap 535091 535090 TGGAATGACAAATAA TCCGC CGT GCGGA GCTTGTAAGGTAATA TERM 821 535352 - 535333 - G 73 -9.2 -2.93901 | opp_overlap 535331, overlap 535328 ATTGGAGGAACCATA CCTGCGGC CATT GCCGCAGC CATTGGTGTATAAAC TERM 822 536530 - 536558 + g 74 -5.3 -4.84359 | overlap 536535 536557 ACAAGATCTGCTTCG GCTGGTGTTTCTA CAA TAGAGACATTTGC TTTTTGTGCAGCTGC TERM 823 536535 - 536553 + g 75 -6.8 -4.38116 | overlap 536530 ATCTGCTTCGGCTGG TGTTTCTA CAA TAGAGACA TTTGCTTTTTGTGCA fruK 537588 - 536647 - | 1-phosphofructokinase fruB 539089 - 537590 - | bifunctional fructose-specific PTS IIA/HPr protein TERM 824 537813 - 537833 + g 79 -6.8 -4.7254 | AATATTGCACTTGGA CGAGCATG CAAAC CTTGCTCG TTTTTAATCACAAAT NTHI0576 539697 - 539161 - | hypothetical protein vapD 540062 - 539784 - | virulence-associated protein D TERM 825 539867 - 539833 - G 75 -6.5 -4.4261 | gap 1 TGCTCAATACGAAAA GCGCGAATATCTC-GT ACCG ACTGAGAAATCCACGC CAACTGTTTTAGTGC vapX 540262 - 540071 - | hypothetical protein NTHI0579 541632 - 540334 - | hypothetical protein TERM 826 541176 - 541165 - G 76 -3.6 -5.2112 | AATAGTATCAAAAAA CCAC ACAA GCGG TTTAAACACATACAT TERM 827 541509 - 541524 + g 70 -6.2 -4.27316 | GCACGTCGCCTTTAT TTGCAA GAGA TTGCAA TTTTAACTTACGAGA TERM 828 541673 - 541655 - R 95 -8.8 -5.2894 | opp_overlap 541655 AAATATAAAAGAAAA CGACCGCA CTT TGCGACCG TTTGGGATATTACTT NTHI0580 542207 - 541683 - | hypothetical protein NTHI0581 543016 - 542234 - | putative deoxyribonuclease holB 544054 - 543071 - | DNA polymerase III subunit delta' TERM 829 543740 - 543762 + g 81 -9.2 -3.98282 | CACTTTATTACCATT TTGTTGTGCG TGC TGCGCAACAA TTTCATTAATGTCGC NTHI0584 544179 - 544051 - | hypothetical protein TERM 830 544180 - 544170 - G 83 -4 -5.61913 | opp_overlap 544170 AATAAATAGAAAAAA TTTG AAC CAAA TGGTATTTTTTTGTT TERM 831 544572 - 544547 - g 70 -4.7 -4.66953 | TGAATATTGGAAAAA GGAAACTTATC TCCT GAAAAGTCCCC CCTCAAACTTTCCAG TERM 832 545410 - 545420 + G 75 -4.6 -5.03145 | TCTCTTTACAACAAC GCCT AGA GGGC TTTTTTACCAAATTG lav 544254 - 546377 + | autotransported protein Lav TERM 833 546397 - 546419 + T 100 -12.8 -5.88565 | opp_overlap 546397 AGTAGTAACAAAAAA TCGGCAGGAA AAT TTTCTGCCGA TTTTTTTATTCTGAA TERM 834 546419 - 546397 - T 100 -10.6 -5.52023 | opp_overlap 546397 AGTAGTAACAAAAAA TCGGCAGGAA AAT TTTCTGCCGA TTTTTTTATTCTGAA TERM 835 546500 - 546519 + T 72 -9.2 -2.66249 | opp_overlap 546500, overlap 546499 546498 ATTCCAGCCAATGTA GGGTGGGC GTAA GCCCACGC GTATTATTAATAACA TERM 836 546519 - 546500 - T 72 -9.2 -2.55015 | opp_overlap 546500 546499 546498 ATTCCAGCCAATGTA GGGTGGGC GTAA GCCCACGC GTATTATTAATAACA TERM 837 546706 - 546675 - T 100 -9.6 -4.65747 | gap 1, opp_overlap 546680 546698, overlap 546680 TAAGTTGTAACAAAA TAAAATCGGCAG-GA AAT TCTCTGCCGATTTTT TATTTTAAAAGTGCG TERM 838 546680 - 546701 + T 100 -9.5 -5.79595 | gap 1, opp_overlap 546675 546680, overlap 546698 TGTAACAAAATAAAA TCGGCAG-GA AAT TCTCTGCCGA TTTTTTATTTTAAAA TERM 839 546701 - 546680 - T 100 -9.5 -5.27476 | gap 1, opp_overlap 546680 546698, overlap 546675 TGTAACAAAATAAAA TCGGCAG-GA AAT TCTCTGCCGA TTTTTTATTTTAAAA TERM 840 546981 - 546959 - T 100 -8.4 -5.84381 | opp_overlap 546959 GTAGTAACAAAAAAA TCGGCAGGAA AAT CTTCTGCCGA TTTTTTATTCTGAAA TERM 841 546959 - 546981 + T 100 -9.9 -5.55769 | opp_overlap 546959 GTAGTAACAAAAAAA TCGGCAGGA AAATC TTCTGCCGA TTTTTTATTCTGAAA TERM 842 547080 - 547061 - T 72 -9.2 -2.55722 | opp_overlap 547060 547059 547061 ATATCAGCCAATGTA GGGTGGGC GTAA GCCCACGC GTATTATTAATAATA TERM 843 547061 - 547080 + T 72 -9.2 -2.66963 | opp_overlap 547061, overlap 547060 547059 ATATCAGCCAATGTA GGGTGGGC GTAA GCCCACGC GTATTATTAATAATA TERM 844 547261 - 547240 - T 100 -8.7 -5.7946 | opp_overlap 547240 547258 GTTGTAACAAAAAAA TCGGCAGGA AATT TTCTGCCGA TTTTTTATTTTAAAA TERM 845 547240 - 547261 + T 100 -10.9 -5.79595 | opp_overlap 547240, overlap 547258 GTTGTAACAAAAAAA TCGGCAGGA AATT TTCTGCCGA TTTTTTATTTTAAAA tdk 547942 - 547283 - | thymidylate kinase NTHI0587 548975 - 547932 - | periplasmic solute-binding protein TERM 846 548572 - 548589 + g 73 -7 -4.16146 | overlap 548571 TTATCTTTCAAGGTT TGCACC AAGTGC GGTGCA TTTTCAAGATCTTTT TERM 847 549026 - 549011 - R 89 -7.5 -5.22104 | opp_overlap 549011 TAAAAAACAACAAAA GGGGC AATTAA GCCCC TTTATTTTTGATACT TERM 848 549011 - 549026 + r 88 -7.5 -4.92756 | opp_overlap 549011 TAAAAAACAACAAAA GGGGC AATTAA GCCCC TTTATTTTTGATACT surA 549986 - 549045 - | survival protein SurA-like protein TERM 849 549961 - 549971 + g 76 -2.6 -5.48054 | opp_overlap 549951 549961 GCCAATAAAAAAGAT TTTA GAA TAAA TTTTTTCATTTTCAT pyrR 550595 - 550056 - | pyrimidine regulatory protein PyrR mazG 550727 - 551518 + | nucleoside triphosphate pyrophosphohydrolase TERM 850 551526 - 551559 + T 100 -11.2 -4.32951 | opp_overlap 551519 551526 AAAACTAATTGAGAA GTGCGGTAAAAATT TCTCTC ATTTTTTACCGCAC TTTCTTCGTTAAAGT TERM 851 551559 - 551526 - T 89 -11.2 -3.46808 | opp_overlap 551526, overlap 551519 AAAACTAATTGAGAA GTGCGGTAAAAATT TCTCTC ATTTTTTACCGCAC TTTCTTCGTTAAAGT NTHI0592 552443 - 551568 - | hypothetical protein TERM 852 551769 - 551750 - G 74 -5 -4.99947 | CGTAATTAAACAAAA TCTTACTG CGAG CAGAAAGA CGGTATTTTCCTTGT lon 552636 - 555047 + | ATP-dependent protease La TERM 853 555060 - 555079 + F 100 -12.2 -4.89562 | TAATTGAATGTTTTA GGGCTTGT GAAA ACAAGCCC TTTTATTGATTTTAG TERM 854 556002 - 556015 + G 83 -8.1 -4.36914 | TGACGTTTCCGACTG GCGAG ATTA CTCGC TTTTCTAAAACCAAG NTHI0594 555164 - 556315 + | coproporphyrinogen III oxidase rpiA 556449 - 557108 + | ribose-5-phosphate isomerase A serA 557138 - 558370 + | D-3-phosphoglycerate dehydrogenase TERM 855 558374 - 558408 + T 100 -9.6 -4.46854 | gap 1, opp_overlap 558381, overlap 558381 GTACTTTACTAAATA G-AAAAAAGATCAGG GTAATG CCTGATCTTTTTTGC TTTCTTATTCAGTAA TERM 856 558381 - 558400 + T 93 -7.9 -5.46129 | opp_overlap 558381, overlap 558374 ACTAAATAGAAAAAA GATCAGG GTAATG CCTGATC TTTTTTGCTTTCTTA TERM 857 558400 - 558381 - T 93 -7.9 -5.5762 | opp_overlap 558374 558381 ACTAAATAGAAAAAA GATCAGG GTAATG CCTGATC TTTTTTGCTTTCTTA NTHI0597 559255 - 558413 - | aminomethyltransferase related to GcvT NTHI0598 560128 - 559265 - | hypothetical protein TERM 858 559518 - 559544 + g 87 -12.4 -3.17901 | opp_overlap 559516 559513 559514 GCGAGTAAAATCATT TCTTGTTCCACA CGC TGTGGATCAAGA TTAAGTTGAGCATCT TERM 859 559978 - 559988 + g 75 -6.8 -4.46212 | TTTGACGAAGTTTCT CACG CAA CGTG TTTTCTAATCCGCGA TERM 860 560297 - 560319 + H 91 -5 -5.79588 | opp_overlap 560296 560298 560301, overlap 560298 AAATGTACTAAAAAC ACAATTTTTT TCA AAAAAATTGC TTTTTTTAATTTTAA TERM 861 560318 - 560298 - H 82 -8.5 -3.9993 | opp_overlap 560297 560298, overlap 560296 560301 AATGTACTAAAAACA CAATTTTTT TCA AAAAAATTG CTTTTTTTAATTTTA TERM 862 560298 - 560318 + H 82 -8.5 -4.05313 | opp_overlap 560298 560296 560301, overlap 560297 AATGTACTAAAAACA CAATTTTTT TCA AAAAAATTG CTTTTTTTAATTTTA TERM 863 560514 - 560539 + H 100 -11.9 -5.23292 | opp_overlap 560513 560511 560514 AAAAGCAATAAATAC CCCCTCGGAAG GCAA TTTTCGAGGGG TTTTCTTTTATCTCA hisG 560577 - 561488 + | ATP phosphoribosyltransferase TERM 864 561975 - 561985 + G 71 -6.8 -4.11371 | overlap 561969 ATATTCCGGGTGGTT CAGC ACC GCTG TTTTCCACCGTATTG TERM 865 562772 - 562760 - g 72 -6.3 -4.36931 | opp_overlap 562760 GAACTCACACCAAAA GGTTT TAA AAACC TTGCTGAAACGGTGG hisD 561581 - 562864 + | histidinol dehydrogenase TERM 866 563405 - 563394 - g 70 -3 -5.04601 | overlap 563395 GCCAGAAATCAAAAA TCAT CTTA ATGA TGTAAAAGTAGTCTT hisC 562933 - 564036 + | histidinol-phosphate aminotransferase hisB 564148 - 565236 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase TERM 867 565329 - 565341 + G 80 -7.7 -4.39329 | opp_overlap 565325 565323 565329 ACGATTATAGACACA GGTTG TGC CAACC TTTCTTCTGTAAAAT TERM 868 565620 - 565630 + G 73 -8.2 -3.6715 | opp_overlap 565613 AAAACTAATCGAATT CCCG ATA CGGG TTTACCGTTACCTCA hisH 565302 - 565901 + | imidazole glycerol phosphate synthase subunit HisH hisA 565937 - 566686 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 566668 - 567444 + | imidazole glycerol phosphate synthase subunit HisF TERM 869 567919 - 567901 - g 84 -4.5 -5.54894 | AAGGTACCAAAAAAA TCGCCCA AAAAG TGGGGGA AGAAGGTGTGGAAAC hisI 567444 - 568109 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 870 568321 - 568287 - g 76 -3.8 -5.27399 | opp_overlap 568307, overlap 568279 GAAGATAGTAAAAAA TTCACAATTTATAAAT TTT ATTTACAGACTGTAAA TTATACAATACAATT NTHI0606_1 568191 - 568343 + | hypothetical protein tyrP 568373 - 569575 + | tyrosine-specific transport protein 1 TERM 871 569717 - 569688 - T 100 -13.8 -5.24796 | CTCATACAACAAAAA GGCTAAGTTCTA AAATTA TAGAACTTAGCC CTTAAACTAAATGAA atpC 570189 - 569761 - | F0F1 ATP synthase subunit epsilon atpD 571592 - 570219 - | F0F1 ATP synthase subunit beta TERM 872 571634 - 571614 - R 77 -8.9 -3.53012 | opp_overlap 571614 571609 TCCTCTTTTCTTAAA TCGCCGCCG CAC CGGCTACGA TTTCATTCAATTCAT atpG 572478 - 571609 - | F0F1 ATP synthase subunit gamma TERM 873 572372 - 572384 + g 75 -7.7 -4.14392 | GCAGCCATACGATCC TGCGT TTT ACGCA TTTTCGAGGTTGCCA atpA 574035 - 572494 - | F0F1 ATP synthase subunit alpha atpH 574581 - 574048 - | F0F1 ATP synthase subunit delta TERM 874 574197 - 574208 + g 79 -4.4 -5.24449 | CTAATCTTTTTTCCA TTGC AGCT GCAA TTTTTTCGATTTGTG atpF 575064 - 574594 - | F0F1 ATP synthase subunit B TERM 875 574874 - 574888 + g 81 -7.2 -4.85129 | opp_overlap 574873 TTTGCAGCTGAAAGT TCTTGT TCA ACAAGA TTTTTCGTATCTGCT atpE 575368 - 575114 - | F0F1 ATP synthase subunit C atpB 576212 - 575424 - | F0F1 ATP synthase subunit A NTHI0616 576623 - 576249 - | F0F1 ATP synthase subunit I gidB 577360 - 576749 - | glucose-inhibited division protein B NTHI0618 577877 - 577500 - | hypothetical protein TERM 876 578012 - 578032 + G 81 -6.9 -4.81551 | TAGATTACGAGATCT TCAATCCAT ATG AAGGATTGA TTTTTGATATGGATG NTHI0619 577993 - 578595 + | putative phosphatase/phosphohexomutase NTHI0620 578595 - 579068 + | hypothetical protein TERM 877 579103 - 579085 - f 100 -10.3 -5.52023 | ATGAGCAAGAAAAAA CCCCACA ATAAA TGTGGGG CAAATAACCTAAGGA TERM 878 579147 - 579135 - f 74 -6.3 -4.28361 | opp_overlap 579135 579134 579141 CCAATTTTATTAAAA CAACT GCA AGTTG CTTGTTCTATAAGAC TERM 879 579188 - 579162 - f 70 -8.2 -3.21276 | overlap 579165 GCTTGTTCTATAAGA CAATGAACCTTA CTA TAAAGTTCATTA AAATTTGTAAAAAAT TERM 880 579185 - 579165 - f 73 -7.7 -3.7511 | overlap 579162 TGTTCTATAAGACAA TGAACCTTA CTA TAAAGTTCA TTAAAATTTGTAAAA luxS 579253 - 579756 + | S-ribosylhomocysteinase TERM 881 580644 - 580612 - T 100 -10.6 -4.56914 | opp_overlap 580615 TCAGGGAAACTAAAA GGGCTGAGCCCTGT GAATG ACAGAACTCAGTCC TTGAACTAAATCAAT aphA 581407 - 580700 - | acid phosphatase/phosphotransferase hslV 581627 - 582154 + | ATP-dependent protease peptidase subunit hslU 582165 - 583499 + | ATP-dependent protease ATP-binding subunit TERM 882 583549 - 583518 - T 87 -13.2 -2.96009 | opp_overlap 583523, overlap 583509 583523 TAAAAATTTTACATA TAAAAGTGCGGTAA ATTT TTACCGCACTTTTT TGTTTTCTAAATTGA TERM 883 583523 - 583544 + T 100 -13.1 -5.86976 | opp_overlap 583518 583523 ATTTTACATATAAAA GTGCGGTAA ATTT TTACCGCAC TTTTTTGTTTTCTAA TERM 884 583544 - 583523 - T 100 -13.1 -4.61199 | opp_overlap 583523, overlap 583518 ATTTTACATATAAAA GTGCGGTAA ATTT TTACCGCAC TTTTTTGTTTTCTAA potD2 584621 - 583569 - | spermidine/putrescine-binding periplasmic protein 2 precursor TERM 885 584561 - 584551 - G 79 -8.2 -4.11216 | TTGTTATTGGCAAAA GCGG AAG CCGC AAAAAGTGCGGTGGT TERM 886 584674 - 584658 - H 100 -10.9 -4.46212 | TCGTTCATCATAAAA CACGCAA ATT TTGCGTG CGCGCAGTATAGCAT TERM 887 584744 - 584754 + H 74 -3.2 -5.38249 | GATTTTGCCAGTTTT TTCC TAA GGGA TTTTTTATGCTTAAT ordL 584761 - 586056 + | oxidoreductase OrdL TERM 888 586243 - 586256 + G 71 -6.7 -4.10144 | AAATTTGTTACTTTT CAGCT TGTT AGCTG TTGTTATTATATTGA TERM 889 587189 - 587177 - g 73 -2.7 -5.252 | GATCTGCATAAAAAA GATTA CAG CAATC TGATTGGCATGCGTA rmuC 586220 - 587662 + | DNA recombination protein RmuC TERM 890 587667 - 587698 + F 100 -9.6 -5.35459 | opp_overlap 587667 ATCTTCAATAATTTA TTCTCCGATTGAAT GTAA ATTTGGTCGGAGAA TTTTTTATCCTATCT rbsD 587826 - 588245 + | D-ribose pyranase TERM 891 589215 - 589201 - g 72 -7.2 -3.93166 | overlap 589197 589203 589206 CGGTTAAAAAATCAA GAGATT GAG AATCTC AGTCCGCAAGATGGT rbsA 588259 - 589740 + | D-ribose transporter ATP binding protein TERM 892 589801 - 589811 + G 74 -5.4 -4.72631 | GGAAGATTTTTGATT GAAC AGC GTTC TTTTATTGCGTTGAT rbsC 589753 - 590724 + | ribose ABC transporter permease protein TERM 893 591027 - 591005 - g 71 -9.2 -2.51642 | overlap 591004 591009 591023 ATATTATTGATCAAT CCAACTGATT CTG AAGCAGTTGG CAACGCAGTGGCGAT rbsB 590744 - 591622 + | D-ribose transporter subunit RbsB TERM 894 591657 - 591679 + F 89 -11.4 -3.48276 | opp_overlap 591654 591657 CGTTATATCACATTA TGGGGCAAAT TAT ATTTGTCCCA TTGTGTAGAAAGAAA TERM 895 591679 - 591657 - f 72 -9.2 -2.68434 | opp_overlap 591657, overlap 591654 CGTTATATCACATTA TGGGGCAAAT TAT ATTTGTCCCA TTGTGTAGAAAGAAA rbsK 591720 - 592640 + | ribokinase TERM 896 593241 - 593229 - g 70 -2.7 -5.12707 | GGAAATCTCAAAAAA TCTGT CGC ACAAA ATCGTTTGCAAGGTT rbsR 592668 - 593666 + | ribose operon repressor TERM 897 593701 - 593733 + F 89 -8.6 -4.41616 | CCTTATTGCTATTTT CAAAAAAACTGCTA TTTTC TTGCGGTTTTTTTG TTTATTTAACCCACT NTHI0635 593772 - 594323 + | hypothetical protein TERM 898 594343 - 594363 + T 100 -15.5 -4.63586 | TTACCGCACTTTTAA CCCCGTTCA AAT TGAACGGGG TTTTATATATCATAT menG 594951 - 594463 - | ribonuclease activity regulator protein RraA menA 595935 - 595003 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase NTHI0638 595982 - 596701 + | hypothetical protein TERM 899 596711 - 596743 + T 91 -12.1 -3.69734 | opp_overlap 596716 596719, overlap 596712 596715 596716 596719 AAATAGATGTAATAT GTAAATAAGGCAGGG AAT CCCTGCCTTAGTTAA TTTAAATGCCTTATT TERM 900 596712 - 596742 + T 100 -15.6 -2.81118 | opp_overlap 596716 596719, overlap 596711 596715 596716 596719 AATAGATGTAATATG TAAATAAGGCAGGG AAT CCCTGCCTTAGTTA ATTTAAATGCCTTAT TERM 901 596715 - 596739 + T 95 -12.9 -3.54676 | opp_overlap 596716 596719, overlap 596712 596711 596716 596719 AGATGTAATATGTAA ATAAGGCAGGG AAT CCCTGCCTTAG TTAATTTAAATGCCT TERM 902 596738 - 596716 - T 100 -16.4 -3.77087 | opp_overlap 596715 596712 596711 596716 596719, overlap 596719 GATGTAATATGTAAA TAAGGCAGGG AAT CCCTGCCTTA GTTAATTTAAATGCC TERM 903 596716 - 596738 + T 100 -16.4 -2.72324 | opp_overlap 596716 596719, overlap 596715 596712 596711 596719 GATGTAATATGTAAA TAAGGCAGGG AAT CCCTGCCTTA GTTAATTTAAATGCC TERM 904 596735 - 596719 - T 100 -13.7 -4.011 | opp_overlap 596716 596715 596712 596711 596719, overlap 596716 GTAATATGTAAATAA GGCAGGG AAT CCCTGCC TTAGTTAATTTAAAT TERM 905 596719 - 596735 + T 95 -13.7 -3.50532 | opp_overlap 596719 596716, overlap 596716 596715 596712 596711 GTAATATGTAAATAA GGCAGGG AAT CCCTGCC TTAGTTAATTTAAAT tehA 597740 - 596754 - | potassium-tellurite ethidium and proflavin transporter TERM 906 597853 - 597870 + r 80 -7 -4.46212 | opp_overlap 597853 CATAAAAATAAAAAA CCCGAA CTTTCA TTCGGG TTTTCTCATACAGGG TERM 907 597870 - 597853 - R 100 -7.7 -5.98675 | opp_overlap 597853 CATAAAAATAAAAAA CCCGAAC TTTC ATTCGGG TTTTCTCATACAGGG rpoC 602142 - 597892 - | DNA-directed RNA polymerase subunit beta' TERM 908 599266 - 599278 + g 84 -7.7 -4.74103 | opp_overlap 599265 TGCATTCATTAAATG CACTG TAC CAGTG TTTTTAACTTGCACA TERM 909 600849 - 600832 - G 70 -7.7 -3.55548 | TAAGATCGGTTCAAA CGCTTGG ATAC CCAAACG GTGAAGTGTTGGCGC rpoB 606380 - 602349 - | DNA-directed RNA polymerase subunit beta TERM 910 606335 - 606353 + g 88 -3.1 -5.76949 | CTTGCGGACGTTTAC CGAAATC TTTAC GAATTCG TTTTTTTTCAGAATA TERM 911 606551 - 606522 - R 72 -5.9 -4.28762 | opp_overlap 606526 ACAACTTGAGCAAAA CAACGACAAAT AACGGTGA ATTTGTCATTG TGTGGATGTGCTTTC TERM 912 606629 - 606599 - R 72 -4.8 -4.81082 | opp_overlap 606599, overlap 606601 606607 AATTAAGCAATAAAA GGTCAAGATTGATT AAA AATCAATCTAAATC TTTGCTAATTTTAAG TERM 913 606739 - 606719 - R 100 -14.1 -5.99154 | opp_overlap 606719 TATGAAACAAAAAAA CCGCACTTT CAA AAAGTGCGG TTTAAAATCTATCAA TERM 914 606719 - 606739 + r 100 -14.1 -3.65425 | opp_overlap 606719 TATGAAACAAAAAAA CCGCACTTT CAA AAAGTGCGG TTTAAAATCTATCAA rplA 607453 - 606764 - | 50S ribosomal protein L1 rplK 607886 - 607458 - | 50S ribosomal protein L11 TERM 915 607993 - 607972 - R 100 -9.5 -5.00895 | TGCACCACACAAAAA TATGAGCCA CAAA CGGCTCATA ATGGGCGCGGATTAT deoD 608775 - 608059 - | purine nucleoside phosphorylase TERM 916 608844 - 608808 - R 79 -4.6 -5.23396 | gap 1, opp_overlap 608816, overlap 608816 AATAATGAATAAAAA TGAATAAAGTGCGGTCA TTTT TTACCGCACTTT-TTAA TTGATTAAGATAAAT TERM 917 608816 - 608837 + r 95 -8.7 -4.93547 | opp_overlap 608808 608816 ATAAAAATGAATAAA GTGCGGTCA TTTT TTACCGCAC TTTTTAATTGATTAA TERM 918 608837 - 608816 - R 89 -8.7 -4.52042 | opp_overlap 608816, overlap 608808 ATAAAAATGAATAAA GTGCGGTCA TTTT TTACCGCAC TTTTTAATTGATTAA NTHI0645 610112 - 608859 - | nucleoside permease NTHI0646 610999 - 610211 - | pyruvate-formate lyase-activating enzyme NTHI0647 612552 - 611008 - | hypothetical protein NTHI0648 612765 - 613421 + | hypothetical protein waaQ 614447 - 613377 - | ADP-heptose--lipooligosaccharide heptosyltransferase III TERM 919 613581 - 613569 - G 80 -7.7 -4.3898 | opp_overlap 613568, overlap 613552 ACTATTTGGATAAAA TCCGA TAG TCGGA ATATTAAACGCACTG TERM 920 613932 - 613913 - G 83 -5.6 -5.40072 | opp_overlap 613913 613914, overlap 613914 TCTCTTGTAAAAAAA CGCGCTGG TTTT CCACCGCA CTTTTCTCAAAGATT TERM 921 613931 - 613914 - G 70 -6.9 -3.83561 | opp_overlap 613914 613913, overlap 613913 CTCTTGTAAAAAAAC GCGCTGG TTTT CCACCGC ACTTTTCTCAAAGAT TERM 922 614459 - 614442 - G 100 -11.3 -6.09196 | opp_overlap 614440 GCTAAAATAAAAAAA CCGCACT TGAA AGTGCGG CCGTATTTTATGTTA fba 615564 - 614485 - | fructose-bisphosphate aldolase TERM 923 615323 - 615335 + g 70 -7.7 -3.5782 | overlap 615319 CCTAAAACATCTGGA CGAGT ACC ACTCG TTGGTTTGATACCTT TERM 924 615617 - 615655 + r 87 -11.2 -3.28791 | opp_overlap 615616, overlap 615619 ACAATTTGAAGAATT TGTATTGATGATGGCATT TTT GATGCCACCATCAATATG TTATAGAGGAAAAGT TERM 925 615619 - 615653 + r 93 -13.8 -3.21276 | opp_overlap 615616, overlap 615617 AATTTGAAGAATTTG TATTGATGATGGCATT TTT GATGCCACCATCAATA TGTTATAGAGGAAAA pgk 616835 - 615675 - | phosphoglycerate kinase NTHI0652 617725 - 616931 - | ribonuclease I NTHI0653 617803 - 618063 + | putative ferredoxin-like protein tyrQ 619417 - 618197 - | tyrosine-specific transport protein 2 TERM 926 619396 - 619406 + g 73 -4 -5.0538 | TAATCAGCGCACTCC CAAA AGT TTTG TTTTTTAGCATAAAA tdk 620035 - 619454 - | thymidine kinase TERM 927 619876 - 619859 - G 84 -6.3 -5.30616 | CGAGCGAAATAAAAA GGCATCT TGCG AAATGCC AATACGCGATGTGAC gcp 621072 - 620044 - | O-sialoglycoprotein endopeptidase TERM 928 621462 - 621450 - g 70 -6.3 -4.24002 | TCGTAAACGTGAAAA TGCAA CAC TTGCA AAACGTCACGCAAAA rpsU 621304 - 621519 + | 30S ribosomal protein S21 TERM 929 621575 - 621553 - f 100 -14.2 -4.21607 | opp_overlap 621553 TCGAGTTAAGACAAA CCGTGAATCC TTT GGACTCACGG TTTTGTTACTTTAAG TERM 930 621553 - 621575 + F 100 -12 -4.84642 | opp_overlap 621553 TCGAGTTAAGACAAA CCGTGAATCC TTT GGACTCACGG TTTTGTTACTTTAAG dnaG 621653 - 623434 + | DNA primase rpoD 623505 - 625376 + | RNA polymerase sigma factor RpoD TERM 931 625437 - 625469 + T 100 -9.4 -4.74084 | opp_overlap 625440 GATACATTTGTTTAA GGACTAAATTCT ATAATCCGC AGAATTTAGTCC TTTTACTTTTACTTT aspA 627113 - 625686 - | aspartate ammonia-lyase TERM 932 626536 - 626548 + g 83 -7.7 -4.6856 | ACCGCATCTTGCAAT TGGGT ACG ACCCA TTTTTAAGATATTTG ureH 628075 - 627260 - | urease accessory protein UreH TERM 933 628082 - 628110 + r 89 -11.1 -3.56568 | overlap 628084 628094 GCTGTTCATAGATTT TGTAGGGGCTAAT TAC ATTAGCCCCGATA TTTCACCAATAATTG TERM 934 628084 - 628108 + r 89 -11.5 -3.35775 | overlap 628082 628094 TGTTCATAGATTTTG TAGGGGCTAAT TAC ATTAGCCCCGA TATTTCACCAATAAT ureG 628827 - 628150 - | urease accessory protein TERM 935 628576 - 628589 + g 77 -9.5 -3.53444 | ACGAATTGCTGTGTG CGGGC AACC GCCCG TTTCCACGCCCATAA TERM 936 628833 - 628857 + r 89 -13.7 -2.87683 | opp_overlap 628846, overlap 628835 628843 TGTTGCTCATGGGTG TAGGGGCAAGT TAC ATTTGCCCCTA TATATCAACGAATGT TERM 937 628835 - 628855 + r 85 -11.9 -2.98942 | opp_overlap 628846, overlap 628833 628843 TTGCTCATGGGTGTA GGGGCAAGT TAC ATTTGCCCC TATATATCAACGAAT ureF 629637 - 628930 - | urease accessory protein UreF ureE 630179 - 629622 - | urease accessory protein UreE TERM 938 630273 - 630257 - R 73 -8.7 -3.27297 | opp_overlap 630257, overlap 630255 ATTTATCAAGTAAGA GGCGTAT CGT ACACGCC TTTTTACACTAATTC TERM 939 630257 - 630273 + r 76 -6.5 -4.64598 | opp_overlap 630255 630257 ATTTATCAAGTAAGA GGCGTAT CGT ACACGCC TTTTTACACTAATTC ureC 632025 - 630307 - | urease subunit alpha TERM 940 630628 - 630638 + g 71 -6.8 -4.14739 | TGGAATTGAGGCATT TGGG TCG CCCA TTTTGGCGTAGCTAA ureB 632342 - 632037 - | urease subunit beta TERM 941 632359 - 632378 + r 80 -9.2 -3.67971 | overlap 632355 632360 TCTTTGTTCCTTGTA GGGTGGGC TTTA GCCCACCA TTGATATTTTTATTT TERM 942 632360 - 632377 + r 86 -12.7 -2.78342 | overlap 632359 632355 CTTTGTTCCTTGTAG GGTGGGC TTTA GCCCACC ATTGATATTTTTATT ureA 632721 - 632419 - | urease subunit gamma groES 632884 - 633174 + | co-chaperonin GroES groEL 633197 - 634834 + | chaperonin GroEL TERM 943 634901 - 634873 - T 77 -6.1 -4.67608 | opp_overlap 634873 TATCCCAACAGAAAA TTTGAGCTCTA TATGACT TAGGGCTCAAA TCTACTAAAATAAGG TERM 944 634963 - 634989 + T 100 -11 -4.68545 | opp_overlap 634968, overlap 634968 ATATGATAAAAATAA AAAAACCCAGTT TTA AACTGGGTTTTA TTTTATCTATTGGAT TERM 945 634968 - 634984 + T 100 -10.9 -5.24647 | opp_overlap 634968, overlap 634963 ATAAAAATAAAAAAA CCCAGTT TTA AACTGGG TTTTATTTTATCTAT TERM 946 634984 - 634968 - T 100 -10.9 -6.23317 | opp_overlap 634968 634963 ATAAAAATAAAAAAA CCCAGTT TTA AACTGGG TTTTATTTTATCTAT rplI 635457 - 635008 - | 50S ribosomal protein L9 rpsR 635701 - 635474 - | 30S ribosomal protein S18 priB 636040 - 635714 - | primosomal replication protein N TERM 947 635762 - 635772 + g 77 -6.8 -4.54047 | opp_overlap 635762 AACTAATTGGCATAA CCCA CTT TGGG TTTTATGTGAGGTAA rpsF 636404 - 636027 - | 30S ribosomal protein S6 TERM 948 636224 - 636236 + g 79 -7.7 -4.20027 | opp_overlap 636224 CTTCTACATTCATAA GCACA TAG TGTGC TTTGTGTAATTTATT TERM 949 636580 - 636556 - R 90 -8 -5.14563 | gap 1, opp_overlap 636559 636561, overlap 636559 TTTTTGAGCAAAAAA GA-AGACCGAT ATAT ATCGGTCTATC TCACATATTCTGCAA TERM 950 636559 - 636576 + r 76 -9.9 -2.92003 | opp_overlap 636559 636556, overlap 636561 TTGAGCAAAAAAGAA GACCGAT ATAT ATCGGTC TATCTCACATATTCT TERM 951 636576 - 636559 - R 100 -9.9 -4.67552 | opp_overlap 636559 636561, overlap 636556 TTGAGCAAAAAAGAA GACCGAT ATAT ATCGGTC TATCTCACATATTCT infA 636850 - 636596 - | translation initiation factor IF-1 TERM 952 636974 - 636960 - H 77 -5.8 -4.79756 | GACATAACTGAAAAA TGATTT ACA AAATCA AAACACCCCCTATAA TERM 953 637049 - 637035 - H 70 -3.6 -4.87052 | overlap 637037 TACAAATGAATAAAA CATTAC TAA GTAATA ATAATCACCCAAATA TERM 954 637499 - 637485 - H 72 -2.8 -5.30155 | opp_overlap 637485 GCATTAATGAAAAAA GAACTC GTT GAGTTA TATCATGTCTCTGAA TERM 955 637864 - 637881 + H 79 -4.1 -5.24129 | opp_overlap 637866, overlap 637867 GACTAGAATCTATAT TATCTGG TACG CCAGTTA TTTTTTCTGAAAACA TERM 956 637867 - 637878 + H 77 -5.8 -4.72201 | opp_overlap 637866, overlap 637864 TAGAATCTATATTAT CTGG TACG CCAG TTATTTTTTCTGAAA TERM 957 638021 - 638035 + H 73 -8.6 -3.30783 | opp_overlap 638029, overlap 638020 638028 GCTACACCGTATTCT CAATCC AAT GGATTG TATTCGTTATAATCC ksgA 638183 - 639046 + | dimethyladenosine transferase TERM 958 639077 - 639058 - T 84 -6.5 -5.16681 | opp_overlap 639058 GTAAAAATAATAAAA GGTGTAA TCCTTG TTACACC TTGGCTTTCTACATA lic2A 640024 - 639086 - | UDP-Gal--lipooligosaccharide galactosyltransferase TERM 959 640763 - 640738 - g 74 -6.1 -4.56367 | opp_overlap 640738, overlap 640740 CACTTTATAAACAAA TTCCCATTGTC TTTG GACATTGGGCA AGTTTAGTGGATGAG apaH 640077 - 640904 + | diadenosine tetraphosphatase TERM 960 640997 - 640986 - g 76 -3 -5.37593 | GCCCAAATGAAAAAA TTCT GCCC AGAA GATATTCCAGCGATT TERM 961 641413 - 641396 - g 79 -4.1 -5.41143 | CATTTCTGAAAAAAA TCTGATC TTAC GTTCAGA TGAGGATTTTTGGTG NTHI0680 640914 - 641537 + | hypothetical protein TERM 962 641558 - 641588 + T 82 -9.8 -3.55801 | opp_overlap 641560, overlap 641560 ACCCTTAGTATAAAT AATTGAGCTCTACA TTA TGTAGAGCCCAATA TTTCAGCAAATTAAT TERM 963 641586 - 641560 - T 100 -14.6 -4.11183 | opp_overlap 641558 641560 CCTTAGTATAAATAA TTGAGCTCTACA TTA TGTAGAGCCCAA TATTTCAGCAAATTA TERM 964 641560 - 641586 + T 93 -12.4 -3.35522 | opp_overlap 641560, overlap 641558 CCTTAGTATAAATAA TTGAGCTCTACA TTA TGTAGAGCCCAA TATTTCAGCAAATTA gnd 643117 - 641663 - | 6-phosphogluconate dehydrogenase TERM 965 641736 - 641726 - G 77 -6.8 -4.56597 | opp_overlap 641725 641726 GTTGGTGTGGAAAAA CTCG CCA CGAG GTTTATCTGTGCGTT NTHI0683 643775 - 643233 - | hypothetical protein TERM 966 643473 - 643491 + g 86 -11.8 -3.77087 | TACTCTCGATTGTAG GGGCAAAT TAC ATTTGCCC TTTACCTGTTCAATA NTHI0684 644046 - 643858 - | hypothetical protein devB 644814 - 644116 - | 6-phosphogluconolactonase TERM 967 644897 - 644913 + r 86 -12.3 -2.77701 | opp_overlap 644890, overlap 644894 644892 TGGGAAACGGTAATT CTACCCC AAA GGGGTAG TACTCTTGCTAGCCT zwf 646441 - 644957 - | glucose-6-phosphate 1-dehydrogenase cysQ 647326 - 646517 - | CysQ TERM 968 647282 - 647262 - G 80 -9.8 -3.57309 | opp_overlap 647255 TAAAACTGTTGCAAA TGCTTACC CGCTT GGTAAGCA ATCAGCAATACTTGG NTHI0688 647747 - 647331 - | hypothetical protein TERM 969 647757 - 647779 + r 79 -9.3 -3.34236 | opp_overlap 647757 TTTCATAGTGAAAAA TAGGTTATC CAGAA GATAACCTA TTCTAAAATAAATTT TERM 970 647779 - 647757 - R 100 -10 -4.70659 | opp_overlap 647757 TTTCATAGTGAAAAA TAGGTTATCC AGA AGATAACCTA TTCTAAAATAAATTT NTHI0689 649786 - 647804 - | hypothetical protein TERM 971 650226 - 650208 - g 83 -3.8 -5.63012 | overlap 650211 AAAAAGAAATAAAAA TTATCGCC TTA AGCGATCA ACGCCGAGGTGCGCC hslR 650015 - 650410 + | heat shock protein 15-like protein asnC 650888 - 650436 - | DNA-binding transcriptional regulator AsnC TERM 972 651466 - 651448 - g 71 -4.6 -4.70515 | opp_overlap 651448 CATACTTAAAAGAAA CGGTAAAT TCT ATTTATCG TGCTATTCGTTTAAC asnA 651042 - 652034 + | asparagine synthetase AsnA NTHI0693 652450 - 652097 - | putative transposase-like protein NTHI0694 653063 - 653920 + | hypothetical protein TERM 973 653928 - 653972 + T 78 -7.3 -4.43477 | overlap 653956 AAAGTTAGACTGTTA TTTAAAGGATTGTTTTCGATA TTG TATCGGACTCAGTCCTTTTAA TTTTAGTTGAATCCG TERM 974 653956 - 653966 + T 80 -6.8 -4.72729 | overlap 653928 TTTCGATATTGTATC GGAC TCA GTCC TTTTAATTTTAGTTG NTHI0695 654193 - 654077 - | hypothetical protein NTHI0696 654485 - 654625 + | hypothetical protein TERM 975 654768 - 654721 - T 79 -4.1 -5.28176 | opp_overlap 654721 654735 654741 654758 TTTACCCATAAAAAA TCTGCCCCTCAATTGTTGG TTTGGTTAGT CCAACTTTTGGGGTGCAGA TCAATTTTCACCGCA gph 655479 - 654805 - | phosphoglycolate phosphatase rpe 656229 - 655525 - | ribulose-phosphate 3-epimerase TERM 976 655610 - 655596 - G 71 -4.2 -4.72272 | overlap 655598 CTGGCTTACCAAAAA TTGCAG AAC CTGCCA CGAACATATCTGCAC TERM 977 656319 - 656296 - R 100 -15.4 -4.72277 | opp_overlap 656300 656317, overlap 656300 AACAAGATAAACAAA GAAAGGGCAC TTTG GTGCCCTTTC AGTCATGAATTGAAT TERM 978 656315 - 656300 - R 100 -10.4 -4.84602 | opp_overlap 656300, overlap 656296 AGATAAACAAAGAAA GGGCAC TTTG GTGCCC TTTCAGTCATGAATT TERM 979 656300 - 656315 + r 86 -10.4 -3.69094 | opp_overlap 656300 656296 AGATAAACAAAGAAA GGGCAC TTTG GTGCCC TTTCAGTCATGAATT gyrB 658771 - 656351 - | DNA gyrase subunit B TERM 980 657584 - 657601 + g 73 -8.4 -3.65827 | TAATGCCCCTTTACG GCGCGT CATTTC ACGCGC TTTACGTGCGGCTTC TERM 981 657665 - 657693 + g 75 -3.1 -5.30155 | overlap 657658 AATGATTTTTGCATC TGCAGGATTTTCT AAT AAATATTCCTGCA TTTTTTCATTCATCG TERM 982 658586 - 658561 - G 74 -9.9 -2.75993 | opp_overlap 658566, overlap 658560 658563 GCACCGATACAGAAT TATCATCGTGA ATTG TCACGATAATA TCGGAACAATGGCCA TERM 983 658838 - 658824 - R 89 -7.1 -5.23316 | opp_overlap 658824 GATTATAGCAAAAAA TCGCC GTTTT GGCGA TGCTTTTCGGGAAAG TERM 984 658887 - 658870 - R 100 -11.3 -5.68039 | opp_overlap 658868 658865 AAAGCGATAAAAAAA GGGCGAA TAAT TTCGCCC TATAACTTGTTATTT NTHI0701 661209 - 658897 - | transcriptional accessory protein TERM 985 660790 - 660802 + g 70 -2.7 -5.12617 | AAAGGAAAGTGCGGT TGATT CTG GATCA TTTTTTGGCTCATTC greB 661305 - 661781 + | transcription elongation factor GreB NTHI0703 662468 - 661851 - | DNA-binding transcriptional repressor FabR oxyR 663373 - 662468 - | DNA-binding transcriptional regulator OxyR TERM 986 663533 - 663520 - g 79 -2.3 -5.64006 | ATGGAAGGAAAAAAA GTCCC TCAA GTGAC ATTCCGCACTCGTCA pdgX 663496 - 664221 + | peroxiredoxin/glutaredoxin TERM 987 664283 - 664267 - T 90 -10.8 -3.78811 | opp_overlap 664267 AGAATGTAATTTAAA GGGCGC ATTAA GCGCCC TTTTCATTTGTACGA TERM 988 664267 - 664283 + T 100 -10.8 -4.61873 | opp_overlap 664267 AGAATGTAATTTAAA GGGCGC ATTAA GCGCCC TTTTCATTTGTACGA slyX 664534 - 664313 - | hypothetical protein fkbY 664632 - 665357 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 989 665394 - 665373 - f 77 -10.1 -3.11291 | opp_overlap 665373 CGGATAAGTTTAATA GCGCGCGTT CTTT AACGCGTGC TTTTTATTATAAAAA TERM 990 665373 - 665394 + F 100 -12.3 -5.18726 | opp_overlap 665373 CGGATAAGTTTAATA GCGCGCGTT CTTT AACGCGTGC TTTTTATTATAAAAA NTHI0708 665447 - 666112 + | hypothetical protein NTHI0709 666112 - 666492 + | hypothetical protein TERM 991 666582 - 666602 + G 73 -2.5 -5.28778 | overlap 666584 666585 GCGACAGCTTTTTGT GAACCCAAT GAT ATTGGGATA TTTTTTATCGATGAT TERM 992 666585 - 666599 + G 70 -8.6 -3.15403 | overlap 666584 666582 ACAGCTTTTTGTGAA CCCAAT GAT ATTGGG ATATTTTTTATCGAT NTHI0710 666489 - 666848 + | hypothetical protein NTHI0711 666857 - 667144 + | hypothetical protein TERM 993 667194 - 667225 + T 95 -8.8 -5.01845 | opp_overlap 667200, overlap 667199 667200 ATCAGATATAGAATA AAAAAATGCGGAGA ATTT TCTCCGCACTTTTC TTTTTACTTCTTCTG TERM 994 667199 - 667220 + T 95 -8.7 -5.34655 | opp_overlap 667200, overlap 667194 667200 ATATAGAATAAAAAA ATGCGGAGA ATTT TCTCCGCAC TTTTCTTTTTACTTC TERM 995 667219 - 667200 - T 100 -12.2 -5.9218 | opp_overlap 667199 667194 667200 TATAGAATAAAAAAA TGCGGAGA ATTT TCTCCGCA CTTTTCTTTTTACTT TERM 996 667200 - 667219 + T 91 -12.2 -3.78353 | opp_overlap 667200, overlap 667199 667194 TATAGAATAAAAAAA TGCGGAGA ATTT TCTCCGCA CTTTTCTTTTTACTT TERM 997 667268 - 667285 + T 73 -7.1 -4.07568 | AAGACATTCAAGAGT TCATCAA TTAT TTGATGA TTTTCGCAACAACGC tuf 668459 - 667275 - | elongation factor Tu TERM 998 669003 - 669017 + H 70 -2.2 -5.25976 | opp_overlap 669003, overlap 669003 669004 TTTAACTGACAAGTA TTTTTT ATA AAAAAG TTTATTTTTTTGATT coaA 669165 - 670088 + | pantothenate kinase TERM 999 670090 - 670115 + T 83 -10.5 -3.18912 | opp_overlap 670092, overlap 670092 AATTAAGAAAATAAA AATTCGCACGT AAAA ACGTGCGAATC TTAGTCAATGCCTAA TERM 1000 670092 - 670113 + T 91 -13.1 -3.15699 | opp_overlap 670092, overlap 670090 TTAAGAAAATAAAAA TTCGCACGT AAAA ACGTGCGAA TCTTAGTCAATGCCT TERM 1001 670113 - 670092 - T 100 -13.1 -5.62288 | opp_overlap 670092 670090 TTAAGAAAATAAAAA TTCGCACGT AAAA ACGTGCGAA TCTTAGTCAATGCCT rseB 671126 - 670179 - | periplasmic negative regulator of sigmaE TERM 1002 670467 - 670479 + g 80 -6.3 -5.13137 | AGACCAAGTTATATC TGAAC TTT GTTCA TTTTTACTTTCTTTC TERM 1003 671178 - 671147 - R 90 -8.2 -5.04325 | gap 1 TCTAAAGGATAAAAA TTCACCACACTAAAT AAC AATTAG-GTGGTGAA TCAATAATCTGAACA rseA 671781 - 671206 - | sigma-E factor negative regulatory protein rpoE 672375 - 671806 - | RNA polymerase sigma factor RpoE TERM 1004 672129 - 672146 + g 76 -9.9 -3.05596 | CCGTTAAATAATTTT TTGCCGT ATTA ACGGCAA TTCGATAAAGCCATG NTHI0720 672741 - 672484 - | hypothetical protein TERM 1005 672814 - 672797 - R 95 -6.3 -5.85737 | opp_overlap 672797 ATAGTAATAAAAAAA GTCAGCA TTTC TGCTAAC TTTCATTCTTTAAAT mscL 673217 - 672831 - | large-conductance mechanosensitive channel TERM 1006 672875 - 672889 + g 85 -2.8 -5.69473 | CAGTAAGCAATGTTT CTGC CTTTGGT GCAG TTTTTTTCTCCTCTG trkA 674666 - 673290 - | potassium transporter peripheral membrane component sun 676031 - 674679 - | SUN protein TERM 1007 675311 - 675338 + g 72 -5.6 -4.56775 | opp_overlap 675331 TCAAATCTTGTACCG TTACAGCACCTT CTTC AAAGTGCGGTAA TTTTTGCACCGCAAT TERM 1008 675509 - 675524 + g 88 -3.2 -5.77856 | CCTCAATGATCTCAC GCCAAT TCGG ATAGGC TTTTTTTAATTTATT fmt 676987 - 676031 - | methionyl-tRNA formyltransferase TERM 1009 677083 - 677026 - R 86 -12.8 -2.9082 | opp_overlap 677026 677028 677028 677029 677068, overlap 677025 677028 ATAGGAAAAAGGAAG TAGGGTGGGCTTAAGCCCACCGTT TTTTGAAATG ATTGCTGGGCTAAAGCCCACCCTA CGTTTTAGCTTTTCG TERM 1010 677026 - 677083 + r 100 -17.1 -2.54204 | opp_overlap 677025 677026 677028, overlap 677028 677028 677029 677068 ATAGGAAAAAGGAAG TAGGGTGGGCTTAAGCCCACCGTTTTT TGAA ATGATTGCTGGGCTAAAGCCCACCCTA CGTTTTAGCTTTTCG TERM 1011 677081 - 677028 - R 83 -11 -2.98982 | opp_overlap 677028 677028 677026 677029 677068, overlap 677025 677026 AGGAAAAAGGAAGTA GGGTGGGCTTAAGCCCACCGTT TTTTGAAATG ATTGCTGGGCTAAAGCCCACCC TACGTTTTAGCTTTT TERM 1012 677028 - 677081 + r 100 -15.3 -2.79535 | opp_overlap 677025 677026 677028, overlap 677028 677026 677029 677068 AGGAAAAAGGAAGTA GGGTGGGCTTAAGCCCACCGTTTTT TGAA ATGATTGCTGGGCTAAAGCCCACCC TACGTTTTAGCTTTT TERM 1013 677028 - 677047 + r 100 -9.2 -5.07053 | opp_overlap 677025 677026 677028, overlap 677026 677028 677029 AGGAAAAAGGAAGTA GGGTGGGC TTAA GCCCACCG TTTTTTGAAATGATT TERM 1014 677029 - 677046 + r 95 -12.7 -3.63148 | opp_overlap 677028 677025 677026, overlap 677028 677028 677026 GGAAAAAGGAAGTAG GGTGGGC TTAA GCCCACC GTTTTTTGAAATGAT def 677597 - 677088 - | peptide deformylase TERM 1015 677668 - 677681 + r 77 -9.5 -3.23979 | opp_overlap 677668 AGAATGTGTAGAAAA GCCCC AAAT GGGGC TTAGATTAATATTCG TERM 1016 677681 - 677668 - R 93 -9.5 -4.40572 | opp_overlap 677668 AGAATGTGTAGAAAA GCCCC AAAT GGGGC TTAGATTAATATTCG NTHI0726 678224 - 677787 - | hypothetical protein NTHI0727 678387 - 678202 - | hypothetical protein TERM 1017 678567 - 678602 + r 80 -6.3 -4.82819 | gap 2, opp_overlap 678573, overlap 678573 TGAAATTTAAAGATA GA-AA-AACCCCCAGCC TTTC GACTGGGGGTTCTTATC TTTTATTCTACTCTG TERM 1018 678594 - 678573 - R 100 -13.7 -5.14985 | opp_overlap 678567 678573 TTAAAGATAGAAAAA CCCCCAGCC TTTC GACTGGGGG TTCTTATCTTTTATT TERM 1019 678573 - 678594 + r 100 -11.5 -4.13421 | opp_overlap 678573, overlap 678567 TTAAAGATAGAAAAA CCCCCAGCC TTTC GACTGGGGG TTCTTATCTTTTATT TERM 1020 680610 - 680624 + r 80 -7.1 -4.58213 | overlap 680601 TGGTCTTCCGGCGAA CGGGT TTTTC ACCCG TTTTATCGTTACTTA TERM 1021 682430 - 682409 - R 76 -3.9 -5.24291 | AAAACTAAAACAAAA TTAAATTTA AAAT TAAACTTAA AATAACCTAATATTT TERM 1022 682865 - 682848 - R 74 -9.1 -3.07291 | opp_overlap 682848 AAGGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC TERM 1023 684431 - 684412 - R 81 -5.8 -5.0065 | TAGCTATAAATAAAA CACTACTT AAAA AAGTAATG ATGAATTTTCAGTTA TERM 1024 684593 - 684546 - R 70 -2.3 -5.32699 | gap 3, opp_overlap 684584, overlap 684549 TTAAAGAGCAAAAAA TAACGACGCAC--TTG-GAAACTT AAA AAACTTCACAACAGTGCGTCGTTG TGTGCGGTGCATTAT sxy 685321 - 684668 - | DNA transformation protein TfoX TERM 1025 685440 - 685454 + H 73 -4.4 -4.96848 | opp_overlap 685453, overlap 685453 TTGTGAGCCAGATCG TAAATT TAA AATTTA TTTTTATCTAAACGA TERM 1026 685679 - 685666 - H 73 -3.9 -5.02439 | ATATAATCACAAAAA TTTGA ACAT TCAAA CAGGATTTTAATTAT TERM 1027 685741 - 685720 - g 100 -12.3 -5.74684 | GAAGAAAAACAAAAA GCCCTAGCG GCTG CACTAGGGC AAATCGAAAAACAAT TERM 1028 686466 - 686446 - g 79 -6.1 -4.89063 | opp_overlap 686459 GTAGTGAAAAACAAA TTAGCGGCA CCG TTCCGCCAA GTGGATTTCCAAATT recA 685693 - 686757 + | recombinase A TERM 1029 686779 - 686800 + F 100 -10.9 -4.09108 | opp_overlap 686779 TTACAAATGCCAAAA GTGCGGTTA AAAA TGACCGCAC TTTATATCGATTCAA TERM 1030 686800 - 686779 - f 85 -8.7 -4.26189 | opp_overlap 686779 TTACAAATGCCAAAA GTGCGGTTA AAAA TGACCGCAC TTTATATCGATTCAA recX 686836 - 687294 + | recombination regulator RecX ccrB 687677 - 687291 - | camphor resistance protein CrcB NTHI0732 688495 - 687677 - | HAD superfamily hydrolase TERM 1031 688523 - 688511 - H 77 -4.9 -5.16472 | opp_overlap 688511 AAAAACCTCAAAAAA TAAAC TAT GTTTA TCATATCACTAAATA argF 688898 - 689902 + | ornithine carbamoyltransferase arcC 689912 - 690844 + | carbamate kinase TERM 1032 690885 - 690920 + F 100 -14.8 -3.60792 | opp_overlap 690885, overlap 690891 TTCTCAAGGTAAAAA GTGCGGTTGGTTTAAC CAAT GTTTTACCAACCGCAC TTTAAACGTTAAACA TERM 1033 690920 - 690885 - f 100 -14.8 -4.74103 | opp_overlap 690885 690891 TTCTCAAGGTAAAAA GTGCGGTTGGTTTAAC CAAT GTTTTACCAACCGCAC TTTAAACGTTAAACA NTHI0735 690949 - 692478 + | hypothetical protein TERM 1034 692640 - 692613 - f 83 -4.9 -5.45802 | opp_overlap 692616 692619, overlap 692616 CTCCTAAAATAAAAA GAAGCACGCAT AGAATG ATGCGTACTTA ATGTAGGGTGGGCTA TERM 1035 692637 - 692616 - f 80 -6.6 -4.80077 | opp_overlap 692616 692619, overlap 692613 CTAAAATAAAAAGAA GCACGCAT AGAATG ATGCGTAC TTAATGTAGGGTGGG TERM 1036 692704 - 692646 - f 86 -12.5 -2.54896 | gap 1, overlap 692658 TGCGTACTTAATGTA GGGTGGGCTAAAGCCCACCAAAATATCA CGAT TGTT-TGTTGGTGGGCTAAAGCCCACTC TACAACTACTAATCA TERM 1037 692792 - 692812 + F 79 -8.5 -3.86244 | opp_overlap 692810, overlap 692810 AATAGTTTTTATTTC TTGATTTTT ATC AAAAATCAA TCTTTATTGTTGTGA TERM 1038 693533 - 693521 - f 83 -7.7 -4.78848 | overlap 693516 CGTTTAAATATAAAA CTGGT TTT ACCAG CGAGAATGATGAAAG TERM 1039 693599 - 693577 - f 78 -7.8 -4.25283 | opp_overlap 693581 ACTTTTGCAGGAAAA GCAAGTATAT TCG ATGTACTTGC TGTCGGCACTTGGCG TERM 1040 693940 - 693930 - f 76 -6.8 -4.47049 | overlap 693934 AAATACAAATATAAA CCCA CTT TGGG ATACCCTAAAACTCT TERM 1041 696119 - 696061 - f 90 -8.1 -5.26119 | opp_overlap 696063 696064, overlap 696063 696064 GTTGTAAAAATAAAA TACGAGCATTTCCTGTTTAG-AT-TGAGT TTGAC ACTCATATACTAAACAGGAAATGCTC--A TTTTTTATTGTGATT TERM 1042 696119 - 696063 - f 100 -17.9 -4.25502 | gap 2, opp_overlap 696063 696064, overlap 696061 696064 TGTAAAAATAAAATA CGAGCATTTCCTGTTTAG-AT-TGAGT TTGAC ACTCATATACTAAACAGGAAATGCTCA TTTTTTATTGTGATT TERM 1043 696063 - 696119 + F 100 -15.7 -5.59534 | gap 2, opp_overlap 696061 696063 696064, overlap 696064 TGTAAAAATAAAATA CGAGCATTTCCTGTTTAG-AT-TGAGT TTGAC ACTCATATACTAAACAGGAAATGCTCA TTTTTTATTGTGATT TERM 1044 696118 - 696064 - f 100 -19.2 -3.13674 | gap 2, opp_overlap 696063 696064, overlap 696061 696063 GTAAAAATAAAATAC GAGCATTTCCTGTTTAG-AT-TGAGT TTGAC ACTCATATACTAAACAGGAAATGCTC ATTTTTTATTGTGAT TERM 1045 696064 - 696118 + F 100 -19.2 -3.9328 | gap 2, opp_overlap 696064 696061 696063, overlap 696063 GTAAAAATAAAATAC GAGCATTTCCTGTTTAG-AT-TGAGT TTGAC ACTCATATACTAAACAGGAAATGCTC ATTTTTTATTGTGAT TERM 1046 696462 - 696431 - f 71 -5.2 -4.63007 | gap 1, overlap 696433 TATAAGCATACAAAA GAGGCATTCT-GTGA AGC TCACGAGAATTCCAC AAGAAAAACTTCTTC TERM 1047 696942 - 696973 + F 95 -8.8 -4.90266 | gap 1, opp_overlap 696948 696949, overlap 696943 696949 CCCCCTACAATATTG AGACAA-GGCCACCT AAA AGGTGGCTTTTGTCA TTTTTAATTCCTGAA TERM 1048 696943 - 696972 + F 95 -12.3 -3.53437 | gap 1, opp_overlap 696948 696949, overlap 696942 696949 CCCCTACAATATTGA GACAA-GGCCACCT AAA AGGTGGCTTTTGTC ATTTTTAATTCCTGA TERM 1049 696966 - 696948 - f 77 -8.8 -3.55582 | opp_overlap 696943 696942 696949, overlap 696949 ACAATATTGAGACAA GGCCACCT AAA AGGTGGCT TTTGTCATTTTTAAT TERM 1050 696965 - 696949 - f 86 -12.3 -2.72626 | opp_overlap 696949 696943 696942, overlap 696948 CAATATTGAGACAAG GCCACCT AAA AGGTGGC TTTTGTCATTTTTAA TERM 1051 696949 - 696965 + F 100 -12.3 -4.72556 | opp_overlap 696948 696949, overlap 696943 696942 CAATATTGAGACAAG GCCACCT AAA AGGTGGC TTTTGTCATTTTTAA TERM 1052 697031 - 697058 + F 83 -7.1 -4.74103 | opp_overlap 697036, overlap 697036 TGCTACGCAATCCAT AAAAATCCAGC TTTTAT GCTGGATTTTG TTTTTAGCTTAGGCA TERM 1053 697036 - 697053 + F 89 -7 -5.29885 | opp_overlap 697036, overlap 697031 CGCAATCCATAAAAA TCCAGC TTTTAT GCTGGA TTTTGTTTTTAGCTT TERM 1054 697053 - 697036 - f 88 -7 -4.91712 | opp_overlap 697031 697036 CGCAATCCATAAAAA TCCAGC TTTTAT GCTGGA TTTTGTTTTTAGCTT TERM 1055 697279 - 697291 + G 72 -7.7 -3.71649 | opp_overlap 697279 697278 GAATATGAAAAAACT GTGCA AAA TGCAC TTTCCGATTTAGGGA pepE 697114 - 697818 + | peptidase E NTHI0739 697836 - 699131 + | C4-dicarboxylate transporter TERM 1056 699173 - 699145 - f 89 -7.4 -5.34055 | opp_overlap 699145 699147 699169, overlap 699146 699147 699149 AGAAATAGTAAAAAA TTGACCGCACTT TATTT AAGTGCGGTCTG TTTTTATAGACTTTT TERM 1057 699145 - 699173 + F 100 -9.6 -4.90296 | opp_overlap 699145 699146 699147 699149, overlap 699147 699169 AGAAATAGTAAAAAA TTGACCGCACTT TATTT AAGTGCGGTCTG TTTTTATAGACTTTT TERM 1058 699172 - 699146 - f 90 -10.9 -3.77993 | opp_overlap 699145 699147 699169, overlap 699145 699147 699149 GAAATAGTAAAAAAT TGACCGCACTT TATTT AAGTGCGGTCT GTTTTTATAGACTTT TERM 1059 699147 - 699171 + F 100 -14.4 -4.05669 | opp_overlap 699146 699145 699147 699149, overlap 699145 699169 AAATAGTAAAAAATT GACCGCACTT TATTT AAGTGCGGTC TGTTTTTATAGACTT TERM 1060 699171 - 699147 - f 93 -14.4 -2.85169 | opp_overlap 699147 699145 699169, overlap 699146 699145 699149 AAATAGTAAAAAATT GACCGCACTT TATTT AAGTGCGGTC TGTTTTTATAGACTT TERM 1061 699169 - 699149 - f 83 -11.2 -2.949 | opp_overlap 699147 699145, overlap 699147 699146 699145 ATAGTAAAAAATTGA CCGCACTT TATTT AAGTGCGG TCTGTTTTTATAGAC TERM 1062 699906 - 699893 - g 77 -8.1 -3.89215 | opp_overlap 699905 CGCTATAAAGGTAAA CCTGC GCAC GCAGG TGCTGCGCCCCATTT abgA 699203 - 700474 + | aminobenzoyl-glutamate utilization protein A TERM 1063 701304 - 701319 + G 70 -7.6 -3.60792 | opp_overlap 701303 ACCTTATCAAGAAGG TGCTGA AAAC TCAGCA TTCTATCTAGCTGAT cpdB 700567 - 702540 + | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein TERM 1064 702593 - 702553 - T 84 -6.3 -5.03945 | opp_overlap 702558, overlap 702558 TAATAATTAGAAAAA TAAAATGCCGCCTAAATAT CTA AAATTTAGATGGCATTTTT TCTTCTAAAGTGCGG TERM 1065 702588 - 702558 - T 84 -6.2 -5.3658 | opp_overlap 702558, overlap 702553 ATTAGAAAAATAAAA TGCCGCCTAAATAT CTA AAATTTAGATGGCA TTTTTTCTTCTAAAG TERM 1066 702558 - 702588 + T 86 -6.2 -5.55769 | opp_overlap 702558 702553 ATTAGAAAAATAAAA TGCCGCCTAAATAT CTA AAATTTAGATGGCA TTTTTTCTTCTAAAG NTHI0742 703056 - 702649 - | HTH-type transcriptional regulator NTHI0743 703743 - 703066 - | zinc transporter ZitB gidA 704251 - 706140 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1067 706158 - 706142 - f 71 -6.7 -4.15788 | AACGTGGGGAATAAA GTTTTTT ATT AAAAAAC AAAAGTGCGGTAAAT TERM 1068 706248 - 706269 + F 73 -4.5 -5.00884 | TATTAAAATTCGCCG TCTATTTCT ATAT GGAAGTAGA TTTTTTGAACAACAT rpsL 706322 - 706696 + | 30S ribosomal protein S12 TERM 1069 706777 - 706767 - f 81 -8.2 -4.20106 | opp_overlap 706771 AAACTCCAGTCAAAA GCGC TTT GCGC TGCAAATTTTCTCAA TERM 1070 706771 - 706783 + F 74 -6.3 -4.42386 | opp_overlap 706767 TCCAGTCAAAAGCGC TTTGC GCT GCAAA TTTTCTCAATGAGAA rpsG, 706853 - 707323 + | 30S ribosomal protein S7 TERM 1071 707364 - 707342 - f 87 -10.6 -3.75153 | opp_overlap 707338, overlap 707343 GTTTTTGAATTTAAA GGGCTTCATC ATT GATGAAGCCT TACCCTTATATAAAC TERM 1072 707363 - 707343 - f 93 -14.1 -2.84878 | opp_overlap 707338, overlap 707342 TTTTTGAATTTAAAG GGCTTCATC ATT GATGAAGCC TTACCCTTATATAAA TERM 1073 707906 - 707885 - g 71 -3.7 -4.99435 | gap 1, overlap 707886 TTGAACAATTAAAAA CCCGC-TTAG GTG CTAATGCGGT TCCACTTCAACTTCC fusA 707407 - 709509 + | elongation factor G tuf 709574 - 710758 + | elongation factor Tu TERM 1074 710839 - 710808 - f 95 -8.8 -5.01845 | opp_overlap 710814, overlap 710813 710814 CAGAAGAAGTAAAAA GAAAAGTGCGGAGA AAAT TCTCCGCATTTTTT TATTCTATATTTGAT TERM 1075 710834 - 710813 - f 95 -8.7 -5.34655 | opp_overlap 710814, overlap 710808 710814 GAAGTAAAAAGAAAA GTGCGGAGA AAAT TCTCCGCAT TTTTTTATTCTATAT TERM 1076 710833 - 710814 - f 91 -12.2 -3.78353 | opp_overlap 710814, overlap 710813 710808 AAGTAAAAAGAAAAG TGCGGAGA AAAT TCTCCGCA TTTTTTTATTCTATA TERM 1077 710814 - 710833 + F 100 -12.2 -5.9218 | opp_overlap 710814 710813 710808 AAGTAAAAAGAAAAG TGCGGAGA AAAT TCTCCGCA TTTTTTTATTCTATA NTHI0749 711218 - 711562 + | chloride channel protein NTHI0751 711553 - 711735 + | chloride channel protein dusA 711738 - 712721 + | tRNA-dihydrouridine synthase A TERM 1078 712756 - 712725 - T 87 -13.2 -2.86181 | opp_overlap 712730, overlap 712730 GTAGAACACTAATCA CAAAATAAGCCGCA AAAG TGCGGCTTATTTTT CAGCTGTTTTTCTTA TERM 1079 712751 - 712730 - T 100 -13.1 -4.57209 | opp_overlap 712730, overlap 712725 ACACTAATCACAAAA TAAGCCGCA AAAG TGCGGCTTA TTTTTCAGCTGTTTT TERM 1080 712730 - 712751 + T 100 -13.1 -4.69464 | opp_overlap 712730 712725 ACACTAATCACAAAA TAAGCCGCA AAAG TGCGGCTTA TTTTTCAGCTGTTTT NTHI0754 713059 - 712769 - | hypothetical protein trpS 714092 - 713082 - | tryptophanyl-tRNA synthetase NTHI0757 714215 - 714832 + | hypothetical protein purB 714855 - 716225 + | adenylosuccinate lyase rplJ 716497 - 716988 + | 50S ribosomal protein L10 rplL 717043 - 717414 + | 50S ribosomal protein L7/L12 TERM 1081 717446 - 717463 + F 100 -11.3 -5.60689 | opp_overlap 717446 TTAAAATTCAAAAAA CCGATGG GAAA CCATCGG TTTTTTCTTATATAA TERM 1082 717463 - 717446 - f 100 -11.3 -5.2696 | opp_overlap 717446 TTAAAATTCAAAAAA CCGATGG GAAA CCATCGG TTTTTTCTTATATAA TERM 1083 718325 - 718302 - g 83 -8.2 -4.43397 | overlap 718299 TTCCAAAATAAACAA GCCTCCAAAT TATT ACTTGAAGGC GTAATGATCTACGAT TERM 1084 718643 - 718629 - g 82 -5 -5.42514 | overlap 718631 GTAGAAATTAAAAAA TCTACC GTT GGTAAA GGTTCTAAAGTAAAT glmU 717573 - 718943 + | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 1085 718972 - 718953 - T 93 -7.9 -5.66338 | opp_overlap 718953 AAATAGAATAAAAAA TCCTACG TATTAT CGTAGGA TTTTTTTATAAACCA TERM 1086 718953 - 718972 + T 93 -7.9 -5.60993 | opp_overlap 718953 AAATAGAATAAAAAA TCCTACG TATTAT CGTAGGA TTTTTTTATAAACCA NTHI0763 719289 - 718978 - | hypothetical protein TERM 1087 719108 - 719088 - G 89 -12.7 -2.6472 | GAAGACGGTATAGCA TTCTAGCTG TAA CAGCTAGAA TAAAGGGATAAACCC pldB 720763 - 719828 - | lysophospholipase L2 TERM 1088 720798 - 720780 - R 100 -10.3 -4.41047 | opp_overlap 720780 ATTTTTTAATGAAAA GGGCGTA GTAAA TACGCCC TTTGTAGTGAAAGTA TERM 1089 720780 - 720798 + r 93 -10.3 -3.96624 | opp_overlap 720780 ATTTTTTAATGAAAA GGGCGTA GTAAA TACGCCC TTTGTAGTGAAAGTA asd 721932 - 720817 - | aspartate-semialdehyde dehydrogenase TERM 1090 722055 - 722092 + r 73 -3.6 -5.02439 | opp_overlap 722057, overlap 722057 ATAAAAAATAAAAAA GTGTGGTTAATTTAAA AGAAAA TTTAATTTAATCACTC TTTTTCTAGTTATCT NTHI0766 722814 - 722098 - | hypothetical protein TERM 1091 722408 - 722391 - G 72 -6.3 -4.4296 | GAATAGACACCAAAA TCATCAC AGTG GCGATGA CCGCATCAAACACGA NTHI0767 723006 - 723662 + | 2-methylthioadenine synthetase TERM 1092 723728 - 723684 - T 95 -11.8 -3.9377 | opp_overlap 723695, overlap 723695 ACAATCTCAACGAAA TAAACAAAAAATCCATCTTC GTATT GAAGATGGATTTTTTTATTA GCCGAACACTTTTTC TERM 1093 723717 - 723695 - T 100 -10.7 -5.85425 | opp_overlap 723695, overlap 723684 GAAATAAACAAAAAA TCCATCTTC GTATT GAAGATGGA TTTTTTTATTAGCCG TERM 1094 723695 - 723717 + T 100 -11.4 -5.7946 | opp_overlap 723684 723695 GAAATAAACAAAAAA TCCATCTTCG TAT TGAAGATGGA TTTTTTTATTAGCCG mdaB 724304 - 723726 - | putative NADPH-quinone reductase, modulator of drug activity B TERM 1095 723909 - 723898 - G 72 -5.8 -4.41348 | opp_overlap 723900, overlap 723900 TTGCCTTCAAAGAAA TCGC CTTC GCGA GTAAAGGCTTCAATC TERM 1096 724465 - 724446 - R 73 -9.2 -2.80071 | opp_overlap 724446, overlap 724445 AAACCCTAGTTAAAC GCGTGGGC TTAA GCCCACCC TACATTGGCTACATT TERM 1097 724446 - 724465 + r 72 -9.2 -2.55392 | opp_overlap 724446 724445 AAACCCTAGTTAAAC GCGTGGGC TTAA GCCCACCC TACATTGGCTACATT TERM 1098 724554 - 724576 + r 100 -12 -5.17507 | opp_overlap 724533 724554 TTTTAAAATAAAAAA TCGGCAGAGA ATT TCCCTGCCGA TTTTTATTAACTTTT TERM 1099 724576 - 724554 - R 100 -14.2 -5.79595 | opp_overlap 724554, overlap 724533 TTTTAAAATAAAAAA TCGGCAGAGA ATT TCCCTGCCGA TTTTTATTAACTTTT rep 726595 - 724583 - | ATP-dependent DNA helicase TERM 1100 725175 - 725191 + g 82 -10.9 -3.31817 | opp_overlap 725166 725163 725161 725170, overlap 725163 ATAGAACGTACCGCA CGTTCTG GTT CAGAACG TTGAATTTCATCATT TERM 1101 726359 - 726373 + g 79 -8.6 -3.92542 | opp_overlap 726359 726358 AAAAGTGGAAACAAG CAATCC TTT GGATTG TTCTTTGCCAATGGA NTHI0770 726813 - 726601 - | periplasmic lipoprotein coaD 727280 - 726810 - | phosphopantetheine adenylyltransferase kdtA 728560 - 727277 - | 3-deoxy-D-manno-octulosonic-acid transferase TERM 1102 728609 - 728589 - H 71 -3.3 -5.07567 | TTATACTTGAAAAAA TTTCGGCTA GTA TAGCAAAAA AAGGATTGAAAATAT TERM 1103 729229 - 729217 - g 93 -4.8 -5.72207 | GCTAAAGGAAAAAAA GCCA CACTT TGGC AAGGAATTTCGCACG lgtF 728623 - 729387 + | UDP-glucose--lipooligosaccharide glucosyltransferase tag 729947 - 729384 - | DNA-3-methyladenine glycosylase TERM 1104 729456 - 729485 + g 100 -12.2 -5.43866 | opp_overlap 729456 729451 CATAAACGCATAGCA CGTGGTTTCGCC AACAAA GACGAAACCACG TTTTTTTAAGGCTTG TERM 1105 729485 - 729456 - G 95 -14.4 -2.69246 | opp_overlap 729456, overlap 729451 CATAAACGCATAGCA CGTGGTTTCGCC AACAAA GACGAAACCACG TTTTTTTAAGGCTTG TERM 1106 730023 - 730045 + r 93 -9.2 -4.4874 | overlap 730015 TTGGTCGGCGTTATA GCTTCAGTGA GTT TCATTGAGGC TTTTCGCTTTTTAGG NTHI0775 730814 - 730062 - | hypothetical protein aroE 731632 - 730826 - | shikimate 5-dehydrogenase NTHI0777 732187 - 731636 - | translation factor SUA5 NTHI0778 732739 - 732203 - | zinc finger domain-containing protein NTHI0779 734665 - 732749 - | ABC transporter ATP-binding protein TERM 1107 734333 - 734356 + g 85 -11.8 -3.65261 | opp_overlap 734331, overlap 734329 TTGCCCGTGAATACG TGCAATGGCG TTAC CGTCATTGCA TTCATTTGCTTGTTC TERM 1108 734500 - 734511 + g 70 -7.2 -3.83403 | overlap 734498 GATAATTTACCTCGC CGCC CTCT GGCG TTAATTCTTTTTTTA TERM 1109 734718 - 734736 + r 74 -6 -4.5538 | overlap 734712 734734 ATATTTTTTCTTTTC TCGGAACA GTC TATTCCGA TTTTATCGATTTTCT NTHI0780 735146 - 734850 - | putative HTH-type transcriptional regulator NTHI0781 735321 - 735139 - | hypothetical protein TERM 1110 735247 - 735284 + g 76 -9.9 -3.13592 | overlap 735245 735242 ATCTTTGCTTTCATT TTGAGCCAGCGATAGCA GATA TTCTTTCACTGGCTCAA TGTCATTTTGGTCTC TERM 1111 735347 - 735368 + r 95 -8.9 -4.84527 | ATTTACTTATTTATT TCAATAACT AATA AGTTATTGA TTTTTGATGTGTAAG TERM 1112 735546 - 735577 + r 88 -13.2 -3.0579 | opp_overlap 735551, overlap 735551 AGATCCTTTCTTAAG AAAAAGTGCGGTAA AAAT TTACCGCACTTTTG ATTTTAGACAGGTTT TERM 1113 735551 - 735572 + r 100 -13.1 -4.67038 | opp_overlap 735551, overlap 735546 CTTTCTTAAGAAAAA GTGCGGTAA AAAT TTACCGCAC TTTTGATTTTAGACA TERM 1114 735572 - 735551 - R 100 -13.1 -5.06414 | opp_overlap 735551 735546 CTTTCTTAAGAAAAA GTGCGGTAA AAAT TTACCGCAC TTTTGATTTTAGACA hgpB 738569 - 735591 - | hemoglobin-haptoglobin binding protein B TERM 1115 736608 - 736620 + g 70 -6.9 -3.83559 | overlap 736606 ATCATCAGGTAATTT CGGTG TAA CGCCG TGTTTATATTTTGGT TERM 1116 737192 - 737209 + g 74 -5.7 -4.79451 | AAGGATGTTCAGTTT CAAAAAT TTTC ATTTTTG TTTTATCTTTACAAT TERM 1117 738768 - 738740 - H 70 -8.2 -3.24747 | gap 1 TGTTGATATTAGTAA TTGTAGGGTGGGC TTTA GCCCACCA-ACAA ACAATCGTGAGATAT TERM 1118 738786 - 738805 + H 72 -9.2 -2.54896 | opp_overlap 738783 AATCGTGAGATATTT TGGTGGGC TGAA GCCCACCC TACATTAAGTACGCA TERM 1119 738811 - 738842 + H 86 -6 -5.45802 | opp_overlap 738814, overlap 738814 AAGCCCACCCTACAT TAAGTACGCATA ATTCTTTC TATGCGTACTTC TTTTTATTTTAGGAG TERM 1120 738839 - 738814 - H 70 -8.4 -3.27022 | opp_overlap 738811 738814 CCCACCCTACATTAA GTACGCATAA TTCTTT CTATGCGTAC TTCTTTTTATTTTAG TERM 1121 738814 - 738839 + H 83 -7.7 -4.80077 | opp_overlap 738814, overlap 738811 CCCACCCTACATTAA GTACGCATA ATTCTTTC TATGCGTAC TTCTTTTTATTTTAG TERM 1122 739003 - 739022 + H 72 -9.2 -2.54896 | opp_overlap 739000 AATCGTAAGATATTT TGGTGGGC TGAA GCCCACCC TACATTAAGTACGCA TERM 1123 739028 - 739059 + H 86 -6 -5.45802 | opp_overlap 739031, overlap 739031 AAGCCCACCCTACAT TAAGTACGCATA ATTCTTTC TATGCGTACTTC TTTTTATTTTAGGAG TERM 1124 739031 - 739056 + H 83 -7.7 -4.80077 | opp_overlap 739031, overlap 739028 CCCACCCTACATTAA GTACGCATA ATTCTTTC TATGCGTAC TTCTTTTTATTTTAG TERM 1125 739056 - 739031 - H 70 -8.4 -3.27022 | opp_overlap 739031 739028 CCCACCCTACATTAA GTACGCATAA TTCTTT CTATGCGTAC TTCTTTTTATTTTAG TERM 1126 739220 - 739239 + H 72 -9.2 -2.55213 | opp_overlap 739217 AGTCGTGAGATATTT TGGTGGGC TGAA GCCCACCC TACATTAAGTACGTA TERM 1127 739245 - 739276 + H 74 -2.4 -5.45802 | opp_overlap 739248, overlap 739248 AAGCCCACCCTACAT TAAGTACGTATA ATTCTTTC TATGCGTACTTC TTTTTATTTTAGGAG TERM 1128 739248 - 739273 + H 70 -4.1 -4.80077 | opp_overlap 739248, overlap 739245 CCCACCCTACATTAA GTACGTATA ATTCTTTC TATGCGTAC TTCTTTTTATTTTAG TERM 1129 739559 - 739528 - g 73 -3.7 -5.08824 | overlap 739530 TTTGCAGGGAAAAAA TCTGTGCAGGC GTCTTATTTT GCCAGCACAAA AGTGAAGCATGAATT TERM 1130 740743 - 740770 + G 70 -4.8 -4.58297 | gap 1 CAACGTTTAGCTTTA GCGCGTGCTTTGT TAC ACAATGC-CGAGC TTTATATTTTTGATG NTHI0783 739300 - 741045 + | ABC transporter ATP-binding protein TERM 1131 742091 - 742075 - g 72 -8 -3.83323 | TGTAGAGAACCTAAA CTTCGC TTACG GCGAAG AACAAATTTTATCGG NTHI0785 741038 - 742696 + | ABC transporter ATP-binding protein TERM 1132 742740 - 742707 - T 70 -6.9 -3.80094 | opp_overlap 742714, overlap 742714 CCTAAATTAATATAA GAAAAAATCGCAC TGTTAAAG GTGCGATTTTTTT GTTGGAGAGAAAAAG TERM 1133 742714 - 742733 + T 91 -5.7 -5.7946 | opp_overlap 742714 742707 TAATATAAGAAAAAA TCGCACT GTTAAA GGTGCGA TTTTTTTGTTGGAGA TERM 1134 742733 - 742714 - T 86 -5 -5.64304 | opp_overlap 742714, overlap 742707 TAATATAAGAAAAAA TCGCAC TGTTAAAG GTGCGA TTTTTTTGTTGGAGA NTHI0786 743811 - 742780 - | hypothetical protein NTHI0787 744128 - 743808 - | hypothetical protein TERM 1135 743884 - 743871 - G 71 -3.8 -4.90266 | opp_overlap 743871 743879 743883, overlap 743882 GTTATTAAGTAAAAA GCGA AACATA TCGC TTTCATCAATTCGTT NTHI0788 744424 - 744116 - | putative HTH-type transcriptional regulator TERM 1136 744437 - 744451 + r 82 -4.4 -5.40625 | overlap 744434 744445 CATATTTGATACTTT TATTTT AAT AAAATA TTTTTTATATCATAT glpX 745630 - 744629 - | fructose 1,6-bisphosphatase II TERM 1137 745770 - 745735 - H 82 -7.8 -4.59853 | gap 1, opp_overlap 745734 TCAATGCTTTAAAAA GGTAAATTTACTGGGTA AAA TACCCC-TAAACTTACC CATATTTAAAAGGAA NTHI0790 745792 - 746010 + | hypothetical protein TERM 1138 746014 - 746049 + F 91 -13 -3.33483 | gap 1, opp_overlap 746022, overlap 746022 GATAACGTTTAATCG TAATAAAA-GGCTTAGA TTT TCTAAGCCTTTTTATTA TTAATCATTTCAATA TERM 1139 746022 - 746040 + F 100 -11.8 -5.31855 | opp_overlap 746022, overlap 746014 TTAATCGTAATAAAA GGCTTAGA TTT TCTAAGCC TTTTTATTATTAATC TERM 1140 746040 - 746022 - f 100 -11.8 -4.68103 | opp_overlap 746022 746014 TTAATCGTAATAAAA GGCTTAGA TTT TCTAAGCC TTTTTATTATTAATC mioC 746109 - 746549 + | flavodoxin dtd 746546 - 746980 + | D-tyrosyl-tRNA deacylase TERM 1141 747141 - 747124 - T 75 -4.7 -4.8622 | opp_overlap 747124 GTTGGTAAGCAAAAA GGCGGAC TGAA GCCCTCC ATTGCTCCCTCACCC TERM 1142 747267 - 747225 - T 73 -8.7 -3.17212 | opp_overlap 747231, overlap 747231 TTATTATTTCACTAA TAAAAATGCGATGAAATTC TTTTC AAATTGCACCGCACTTTTA AGAATATAAGAATAG TERM 1143 747261 - 747231 - T 79 -5.5 -5.1356 | opp_overlap 747231, overlap 747225 TTTCACTAATAAAAA TGCGATGAAATTC TTTTC AAATTGCACCGCA CTTTTAAGAATATAA ispF 747763 - 747287 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 748437 - 747760 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ftsB 748715 - 748437 - | cell division protein FtsB TERM 1144 748831 - 748781 - R 74 -5.7 -4.72556 | opp_overlap 748790 748824, overlap 748790 GGAAAAACGATAAAA TGAAAGAAAGTGCGGTTAAAA ATTCTTTTA TTTTAACCGCACTTTTTTGTA TAAAAATTATTTTCT TERM 1145 748822 - 748790 - R 100 -10.8 -4.69048 | opp_overlap 748790, overlap 748781 ATAAAATGAAAGAAA GTGCGGTTAAAA ATTCTTTTA TTTTAACCGCAC TTTTTTGTATAAAAA TERM 1146 748790 - 748822 + r 100 -10.8 -5.36441 | opp_overlap 748790 748781 ATAAAATGAAAGAAA GTGCGGTTAAAA ATTCTTTTA TTTTAACCGCAC TTTTTTGTATAAAAA gpt 749305 - 748838 - | xanthine-guanine phosphoribosyltransferase pepD 749416 - 750870 + | aminoacyl-histidine dipeptidase TERM 1147 750883 - 750925 + T 100 -11.6 -5.72207 | opp_overlap 750882 750883 750888 TAATCTAATATTAAT TAAAAGTGCGGTTAAAAT TTCTTTT GTTTTAACCGCTCTTTTA TTTTTTTCGTTTCGC TERM 1148 750925 - 750883 - T 81 -10.9 -2.63236 | opp_overlap 750883, overlap 750882 750888 TAATCTAATATTAAT TAAAAGTGCGGTTAAAA TTTCTTTTG TTTTAACCGCTCTTTTA TTTTTTTCGTTTCGC TERM 1149 750920 - 750888 - T 76 -6.4 -4.49337 | opp_overlap 750883, overlap 750883 750882 TAATATTAATTAAAA GTGCGGTTAAAA TTTCTTTTG TTTTAACCGCTC TTTTATTTTTTTCGT xerC 751810 - 750923 - | site-specific tyrosine recombinase XerC NTHI0799 752244 - 751804 - | hypothetical protein TERM 1150 752309 - 752319 + H 90 -4 -5.81622 | TCAAGATAATCATCT TTCT GTG AGAA TTTTTTTAATTTTAT tpiA 752410 - 753201 + | triosephosphate isomerase TERM 1151 753256 - 753225 - T 100 -13.2 -4.06611 | opp_overlap 753230, overlap 753230 TAATTAGAATAACAA CAAAAGTGCGGTAA ATTT TTACCGCACTTTTT TATATCTTATATTTT TERM 1152 753230 - 753251 + T 100 -13.1 -5.48787 | opp_overlap 753225 753230 AGAATAACAACAAAA GTGCGGTAA ATTT TTACCGCAC TTTTTTATATCTTAT TERM 1153 753251 - 753230 - T 100 -13.1 -5.01823 | opp_overlap 753230, overlap 753225 AGAATAACAACAAAA GTGCGGTAA ATTT TTACCGCAC TTTTTTATATCTTAT glpE 753600 - 753283 - | thiosulfate sulfurtransferase GlpE NTHI0802 754479 - 753601 - | hypothetical protein ilvY 755389 - 754511 - | DNA-binding transcriptional regulator IlvY TERM 1154 754827 - 754815 - G 79 -4.8 -5.27023 | ACGGGAAAAATAAAA GGCA TTTGC TGCC AATCAATAGGTTTTT TERM 1155 755909 - 755885 - H 83 -7.1 -4.73614 | CACGAGTAAAAGAAA GTAGGTCGCTC ATC GAGCGAAATAC GATGCAATCCACAAA ilvC 756073 - 757551 + | ketol-acid reductoisomerase TERM 1156 757576 - 757599 + T 100 -12.6 -5.1675 | opp_overlap 757576 GAACTGAATTAAAAA CCGACTTTAT CAAT ATAAAGTCGG TTTTTTCATAGATAA TERM 1157 757599 - 757576 - T 100 -12.6 -4.90013 | opp_overlap 757576 GAACTGAATTAAAAA CCGACTTTAT CAAT ATAAAGTCGG TTTTTTCATAGATAA TERM 1158 757651 - 757630 - T 100 -9.5 -5.00765 | opp_overlap 757630 AATTAATCATAAAAA TGCACGTTA ATTA CAACGTGCA TTTTTCTTATTTAAG TERM 1159 757630 - 757651 + T 95 -8.8 -5.38549 | opp_overlap 757630 AATTAATCATAAAAA TGCACGTT AATTAC AACGTGCA TTTTTCTTATTTAAG glpC 758942 - 757662 - | sn-glycerol-3-phosphate dehydrogenase subunit C glpB 760251 - 758953 - | anaerobic glycerol-3-phosphate dehydrogenase subunit B TERM 1160 759972 - 759987 + g 74 -7.6 -4.03234 | AACGTTCAAAATCTT GTGCTT TAGC AAGCAC TTTCTCTGCACCCAA glpA 761932 - 760241 - | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 1161 760611 - 760627 + g 70 -5.1 -4.56597 | CATTCGCAAACCATT GAACGAT CTA AACGTTC TTTTTCAAGCAAACG TERM 1162 760847 - 760827 - G 70 -6.9 -3.767 | CATTCAGCCATTAAA CGATAAGTC ATT AACTTACCG CCAGTGATAGTAATA TERM 1163 761833 - 761818 - G 78 -10.4 -3.19425 | overlap 761809 AATCAATGCCACGAA GTGCGC AATC GCGCAC AATACCTGCTCCTGT TERM 1164 762093 - 762108 + H 84 -6.2 -5.34208 | opp_overlap 762092 AACGGTGTAAAGATT TGTGAA ACAC TTCACA TTTTTGATTTTTTTT TERM 1165 763462 - 763446 - g 89 -7.9 -5.08824 | CTTGCACCGAAAAAA GCAGCAG GTA CTGCAGC AGGTTTCACTGGTTT glpT 762225 - 763667 + | glycerol-3-phosphate transporter TERM 1166 763681 - 763706 + F 80 -4.7 -5.28176 | gap 1 AATTAGCTTAAAAAA GGCGG-TGGGCA AAT TGCTTAGTCGCC TTTTTTGTAACTAAA TERM 1167 764155 - 764142 - g 72 -5.3 -4.65584 | AGAAATGACAGAAAA CTTTG AAAC CAAAG ATGGCAAACAAGCGC TERM 1168 764536 - 764524 - g 75 -3.3 -5.33331 | overlap 764526 GAAACACAAGAAAAA GACCC AAA GGGTT ATTGGGTAAACTATA TERM 1169 764750 - 764706 - g 86 -11.5 -3.75378 | opp_overlap 764706 764706 764705, overlap 764692 764707 ACTTGCACAATATAA TGTGGAAGTGCATCCTTACAC CGT GCGTAAAGATGCACTGCCCGA GTTTTTCACAGACGT TERM 1170 764748 - 764707 - g 93 -13.9 -2.84745 | gap 1, opp_overlap 764706 764706 764705, overlap 764692 764706 CTTGCACAATATAAT GTGGAAGTGCATCCTTACAC CGT GCGTAAAGATGCACTGCC-C GAGTTTTTCACAGAC glpQ 763771 - 764865 + | glycerophosphodiester phosphodiesterase TERM 1171 764878 - 764899 + F 95 -14.5 -3.12446 | opp_overlap 764868 764863 764878, overlap 764870 TAATATCCCTCACAA CCGTGGGTA AACA TACCCACGG TTAACTAGGTTTCTA TERM 1172 764899 - 764878 - f 95 -14.5 -3.31248 | opp_overlap 764878 764870, overlap 764868 764863 TAATATCCCTCACAA CCGTGGGTA AACA TACCCACGG TTAACTAGGTTTCTA TERM 1173 765355 - 765344 - g 70 -3 -5.0538 | TTTGATGGCAAAAAA GTAA TTCC TTAC ATCATTTCACAAATG glpF 765095 - 765889 + | glycerol uptake facilitator protein glpK 765910 - 767421 + | glycerol kinase TERM 1174 767443 - 767485 + T 95 -12.3 -3.67967 | opp_overlap 767448, overlap 767448 AATTAATTCTCATAC AAAAAGAGCGGTCAAAA CTTCTTTTA TTTTGACCGCTCTTTTA TTCTGTATCTGTATA TERM 1175 767480 - 767448 - T 100 -12.9 -4.9725 | opp_overlap 767443 767448 ATTCTCATACAAAAA GAGCGGTCAAAAC TTCTTTT ATTTTGACCGCTC TTTTATTCTGTATCT TERM 1176 767448 - 767480 + T 100 -12.2 -4.88495 | opp_overlap 767448, overlap 767443 ATTCTCATACAAAAA GAGCGGTCAAAA CTTCTTTTA TTTTGACCGCTC TTTTATTCTGTATCT gpt2 767972 - 767505 - | xanthine-guanine phosphoribosyltransferase TERM 1177 768141 - 768168 + H 89 -12.2 -3.18239 | opp_overlap 768144, overlap 768144 AAATAATTTCTATTA TAACCGTAGGTA AGTT TACTTACGGTTA TTAATGCCGTCTATG TERM 1178 768144 - 768165 + H 81 -9.5 -3.73088 | opp_overlap 768144, overlap 768141 TAATTTCTATTATAA CCGTAGGTA AGTT TACTTACGG TTATTAATGCCGTCT TERM 1179 768579 - 768569 - g 72 -5.4 -4.67697 | GTTCAAAATAACAAA CCAT TCG ATGG TAAAGATTGGACTCG hel 768257 - 769081 + | Outer membrane protein P4, NADP phosphatase TERM 1180 769122 - 769098 - f 76 -2.9 -5.52384 | opp_overlap 769103 769104 TTTCCATTAAAAAAA CCAATTTAAAT ATA ATTTAGTTTGG GGCTAAGCTCATTTT TERM 1181 769123 - 769151 + F 84 -6.8 -5.18355 | gap 1, overlap 769122 TATAATTTAGTTTGG GGCTAAGCTCATT TTTT ACTG-GCTTAGCC TTTTTAATTTTTCAA TERM 1182 769315 - 769294 - g 91 -8.7 -4.98531 | opp_overlap 769294 CGTTTAAAGGAAAAA GTGCGGTTA ATTT TCACCGCAC TTTTAAACCAAAATT TERM 1183 769294 - 769315 + G 79 -8.7 -4.08064 | opp_overlap 769294 CGTTTAAAGGAAAAA GTGCGGTTA ATTT TCACCGCAC TTTTAAACCAAAATT rluE 769248 - 769931 + | hypothetical protein TERM 1184 769959 - 769935 - T 83 -5.8 -5.04325 | opp_overlap 769934 769935 769937 GTCAAATTATAAAAA TAGGGCAA GTATTTCGT TTGCCCTA AATTTTTCTCCCATA TERM 1185 770768 - 770784 + T 72 -9.5 -2.59742 | overlap 770767 GCCAACTACATTGAC GTTTTCC ATA GGAAAAC CTTGTAAACGTTCGG NTHI0820 774920 - 771036 - | hypothetical protein TERM 1186 772577 - 772590 + g 71 -6.7 -4.06502 | opp_overlap 772576 ACCAAGCCACATTAC CTTGC GCTT GCAAG TTTCCTTTGAGGCTA TERM 1187 772861 - 772875 + g 70 -7.8 -3.63662 | CACTGTTCCAAAGTG CGGTCA AAA TGGCCG TTAATTTGTAAATTT NTHI0821 776666 - 774930 - | hypothetical protein TERM 1188 776797 - 776770 - R 100 -11.4 -5.24129 | opp_overlap 776749 776750 776769 776768 776770 776772 TTTTTTCATAAAAAA TACCGCACTTCA TTGC CAAAGTGCGGTA AATTTTTGAGCTGTT TERM 1189 776770 - 776797 + r 75 -10 -2.62946 | opp_overlap 776770, overlap 776749 776750 776769 776768 776772 TTTTTTCATAAAAAA TACCGCACTT CATTGCCA AAGTGCGGTA AATTTTTGAGCTGTT slyD 777389 - 776817 - | FKBP-type peptidyl-prolyl cis-trans isomerase SlyD NTHI0823 777889 - 777467 - | hypothetical protein TERM 1190 777574 - 777589 + g 72 -4.8 -4.84359 | AGGTGCCCCAACCAT CATAAA TGCC TTTATG TTTTTCTAACAATGG truD 777998 - 779017 + | tRNA pseudouridine synthase D surE 779027 - 779776 + | stationary phase survival protein SurE TERM 1191 779871 - 779883 + G 84 -6.3 -5.27779 | CTCTTTTGTAAGTTT TATCG AGG CGATA TTTTTTCCTATTCCG TERM 1192 780053 - 780039 - g 73 -7.2 -4.07568 | GGGCTGGGTGGAAAA CATTGT GCA ACAATG GGGATATGCTGCGCA NTHI0826 779785 - 780363 + | hypothetical protein NTHI0827 780372 - 780557 + | hypothetical protein TERM 1193 781686 - 781664 - g 88 -9.3 -4.58466 | CGCATAACGACAAAA TTCTTGTTG CTGAT CAACAAGAA GTCAAAGCTGGTCAA lppB 780592 - 781809 + | lipoprotein TERM 1194 781858 - 781824 - f 100 -10.9 -4.57837 | opp_overlap 781824 AGATCTCTTTAAAAA GTGCGGTAAAAAATC TCAAC AAATTTTTACCGCAC TTTTTTATTAAAAAT TERM 1195 781824 - 781858 + F 100 -10.2 -5.45652 | opp_overlap 781824 AGATCTCTTTAAAAA GTGCGGTAAAAAAT CTCAACA AATTTTTACCGCAC TTTTTTATTAAAAAT TERM 1196 781898 - 781873 - f 74 -5.6 -4.72272 | opp_overlap 781864 CTTTTTTATTAAAAA TATTCTGTGA GGAGTA TCACAAAATA AAAAAATAATAGATG tnaA 782177 - 783595 + | tryptophanase TERM 1197 783628 - 783608 - f 100 -12.7 -4.8083 | opp_overlap 783608 TAATATCACGAAAAA TGCAGTTCA TTT TGAACTGCA TTTTTTTATCAACAG TERM 1198 783608 - 783628 + F 100 -12.7 -5.60993 | opp_overlap 783608 TAATATCACGAAAAA TGCAGTTCA TTT TGAACTGCA TTTTTTTATCAACAG TERM 1199 784116 - 784126 + G 74 -5.4 -4.82756 | CACTCGCATTGTAGA CAGA ATA TCTG TTTTATTGATTGTAT tnaB 783679 - 784911 + | tryptophan-specific transport protein TERM 1200 784932 - 784966 + F 100 -10.2 -5.38951 | opp_overlap 784927 AAATATCAATTTTAA GTGCGGTAAAAAAT CTCAACA AATTTTTACCGCAC TTTTTTATCTGGCTT mutS 785052 - 787637 + | DNA mismatch repair protein selA 787843 - 789228 + | selenocysteine synthase TERM 1201 790288 - 790275 - g 77 -8.1 -3.97406 | opp_overlap 790274, overlap 790266 CCAAAACGTCATAAA CGCAC TGAA GTGCG GTTAAATTTCTTAGC selB 789225 - 791084 + | selenocysteine-specific elongation factor TERM 1202 791399 - 791386 - g 81 -5.3 -5.29445 | opp_overlap 791386 TTTCAACAATAAAAA CCAAT ATTG ATTGG CTTAATGATCTATTG NTHI0837 791103 - 791957 + | hypothetical protein relB 792077 - 792373 + | DNA-damage-inducible protein J, negative regulator of translation NTHI0839 792373 - 792681 + | hypothetical protein TERM 1203 792724 - 792698 - f 100 -12.4 -3.97019 | opp_overlap 792698, overlap 792701 AGTAATCTTAAATAA TAATCCGCACGT AAA ATGTGCGGATTA TTTTTACATAGGATT TERM 1204 792698 - 792724 + F 100 -14.6 -4.67011 | opp_overlap 792698 792701 AGTAATCTTAAATAA TAATCCGCACGT AAA ATGTGCGGATTA TTTTTACATAGGATT TERM 1205 792721 - 792701 - f 93 -9.7 -4.1023 | opp_overlap 792698, overlap 792698 AATCTTAAATAATAA TCCGCACGT AAA ATGTGCGGA TTATTTTTACATAGG TERM 1206 795049 - 795065 + F 72 -5.1 -4.76075 | AAGCGATGGTTTTCA TTAGGCT GAA AGCCCAA TTTTATTAATGTGCT tig 796227 - 797525 + | trigger factor TERM 1207 797592 - 797549 - f 80 -10.5 -3.10894 | opp_overlap 797549 797555, overlap 797554 797555 ATTATTATGATTGAA TAAAAGTGCGGTCGCTCTT TTTAAT AAAAGCGATCGCATTTTTA TTTGTGGGTTATTTA TERM 1208 797549 - 797592 + F 100 -12.7 -4.0386 | opp_overlap 797549 797554 797555, overlap 797555 ATTATTATGATTGAA TAAAAGTGCGGTCGCTCTT TTTAAT AAAAGCGATCGCATTTTTA TTTGTGGGTTATTTA TERM 1209 797587 - 797554 - f 77 -6 -4.69053 | opp_overlap 797549 797555, overlap 797549 797555 TATGATTGAATAAAA GTGCGGTCGCTCTT TTTAAT AAAAGCGATCGCAT TTTTATTTGTGGGTT TERM 1210 797586 - 797555 - f 79 -9.5 -3.40709 | opp_overlap 797549 797555, overlap 797554 797549 ATGATTGAATAAAAG TGCGGTCGCTCTT TTTAAT AAAAGCGATCGCA TTTTTATTTGTGGGT TERM 1211 797555 - 797586 + F 100 -9.5 -5.38958 | opp_overlap 797555 797554 797549, overlap 797549 ATGATTGAATAAAAG TGCGGTCGCTCTT TTTAAT AAAAGCGATCGCA TTTTTATTTGTGGGT clpP 797648 - 798229 + | ATP-dependent Clp protease proteolytic subunit clpX 798239 - 799474 + | ATP-dependent protease ATP-binding subunit secE 799619 - 800035 + | preprotein translocase subunit SecE nusG 800037 - 800594 + | transcription antitermination protein NusG TERM 1212 800636 - 800608 - f 72 -6 -4.41897 | opp_overlap 800613, overlap 800613 AAGAAATGATTAAAA TATAACCGCACT TTTGT AGTGCGGTTTTT TGTTTTTAATGTTTG TERM 1213 800631 - 800613 - f 93 -10.3 -4.00084 | opp_overlap 800613, overlap 800608 ATGATTAAAATATAA CCGCACT TTTGT AGTGCGG TTTTTTGTTTTTAAT TERM 1214 800613 - 800631 + F 100 -10.3 -5.95286 | opp_overlap 800613 800608 ATGATTAAAATATAA CCGCACT TTTGT AGTGCGG TTTTTTGTTTTTAAT vacJ 800745 - 801497 + | VacJ lipoprotein NTHI0851 801551 - 801943 + | YjgF family translation initiation inhibitor TERM 1215 801972 - 802005 + F 100 -14 -5.42975 | opp_overlap 801972 AATCCCTGCTTAAAA GTGCGGTCATAAAC TCGCAT GTTTTTGACCGCAC TTTTTGTTTATCTGC TERM 1216 802005 - 801972 - f 100 -14 -4.08064 | opp_overlap 801972 AATCCCTGCTTAAAA GTGCGGTCATAAAC TCGCAT GTTTTTGACCGCAC TTTTTGTTTATCTGC htpX 802111 - 802962 + | heat shock protein HtpX TERM 1217 802969 - 803006 + T 89 -8.6 -4.55826 | opp_overlap 802969 802976, overlap 802974 AATCTTTAAAAATTA TAAAAAATCGACCGCA CTTTAA TGAGGTCGATGTTTTA TTTTCCTCTTTTCAC TERM 1218 803006 - 802969 - T 77 -9.3 -3.24823 | opp_overlap 802969 802974, overlap 802976 AATCTTTAAAAATTA TAAAAAATCGACCGCAC TTTA ATGAGGTCGATGTTTTA TTTTCCTCTTTTCAC TERM 1219 802974 - 803001 + T 76 -4.1 -5.17488 | opp_overlap 802969 802976, overlap 802969 TTAAAAATTATAAAA AATCGACCGCA CTTTAA TGAGGTCGATG TTTTATTTTCCTCTT TERM 1220 802999 - 802976 - T 93 -7.4 -5.47914 | opp_overlap 802974 802969, overlap 802969 AAAAATTATAAAAAA TCGACCGCAC TTTA ATGAGGTCGA TGTTTTATTTTCCTC sirA 803243 - 803004 - | cell developmental protein SirA NTHI0854 803359 - 803979 + | hypothetical protein trkH 803982 - 805445 + | Trk system potassium uptake protein TrkH TERM 1221 805584 - 805631 + F 70 -2.3 -5.32699 | gap 3, opp_overlap 805573, overlap 805587 ATAATGCACCGCACA CAACGACGCACTGTTGTGAAGTTT TTT AAGTTTC-CAA--GTGCGTCGTTA TTTTTTGCTCTTTAA TERM 1222 805744 - 805763 + F 81 -5.8 -5.0065 | TAACTGAAAATTCAT CATTACTT TTTT AAGTAGTG TTTTATTTATAGCTA TERM 1223 807310 - 807327 + F 74 -9.1 -3.07291 | opp_overlap 807310 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 1224 809326 - 809312 - f 80 -7.1 -4.58213 | overlap 809323 TAAGTAACGATAAAA CGGGT GAAAA ACCCG TTCGCCGGAAGACCA TERM 1225 811291 - 811339 + F 82 -7.9 -4.57073 | overlap 811292 811293 AGTAGGGCACCGCCA GGTTTTATTTTTTTAGTTTATTC ATT GAGTAAATTAAAAAAATAAAAAA TTTTTGGCAGAGATA TERM 1226 811292 - 811338 + F 89 -11.4 -3.33922 | overlap 811291 811293 GTAGGGCACCGCCAG GTTTTATTTTTTTAGTTTATTC ATT GAGTAAATTAAAAAAATAAAAA ATTTTTGGCAGAGAT TERM 1227 811293 - 811337 + F 95 -14.9 -2.60032 | overlap 811292 811291 TAGGGCACCGCCAGG TTTTATTTTTTTAGTTTATTC ATT GAGTAAATTAAAAAAATAAAA AATTTTTGGCAGAGA psiE 811880 - 812299 + | phosphate-starvation-inducible protein PsiE TERM 1228 812319 - 812348 + T 100 -12.3 -4.05402 | opp_overlap 812324, overlap 812324 AGATTCAAAACAACA AAAAACGCACTTC ACTT GAAGTGCGTTTTG TCTTTTTAGTTGAGC TERM 1229 812324 - 812343 + T 100 -12.2 -5.00027 | opp_overlap 812324, overlap 812319 CAAAACAACAAAAAA CGCACTTC ACTT GAAGTGCG TTTTGTCTTTTTAGT TERM 1230 812343 - 812324 - T 100 -12.2 -5.77677 | opp_overlap 812324 812319 CAAAACAACAAAAAA CGCACTTC ACTT GAAGTGCG TTTTGTCTTTTTAGT hemY 813649 - 812363 - | HemY TERM 1231 813267 - 813280 + g 75 -8.1 -3.7795 | TCGCCACGTTGTTGA GCAGC TTCT GCTGC TTTGATGAGATTTAG TERM 1232 813528 - 813514 - G 100 -7.2 -5.73672 | AAATAATGAAAAAAA TCACTA AGG TAGTGA TGGACATTTCTATAA hemX 814871 - 813660 - | putative uroporphyrin-III C-methyltransferase TERM 1233 815091 - 815106 + H 84 -4 -5.59564 | opp_overlap 815091 ATATTTTAAAAAAAT TGTGAT TTAT GTCACA TTTTTTTGCATTTAT TERM 1234 817049 - 817061 + G 72 -7.7 -3.8709 | AATGCCATTTTGCTT GCACT AAA AGTGC TTTCTAACAAAATTT cyaA 815177 - 817708 + | adenylate cyclase gpsA 817782 - 818789 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 1235 818938 - 818957 + G 72 -9.4 -2.80074 | overlap 818935 GCGCTAAGTTATTTA TTGGCTAA CAAA TTAGCCAA TCCTATTATGCCAGC cysE 818806 - 819609 + | serine acetyltransferase TERM 1236 820079 - 820061 - g 73 -3.9 -5.04601 | TTGAGAAATTAAAAA TTTACGC ACGCA ACGTAAA AACAGGTCAATATCT aroE 819619 - 820434 + | shikimate 5-dehydrogenase NTHI0863 820572 - 821957 + | putative di- and tricarboxylate transporter TERM 1237 822069 - 822041 - T 100 -11.9 -4.46514 | opp_overlap 822041, overlap 822028 822027 AGCCATTTAAATAAA TGGGTTAAAGC AAATGAA GCTTTAACCCA TTTTTCATAACCGTT TERM 1238 822041 - 822069 + T 100 -11.9 -4.73388 | opp_overlap 822028 822027 822041 AGCCATTTAAATAAA TGGGTTAAAGC AAATGAA GCTTTAACCCA TTTTTCATAACCGTT folD 822943 - 822095 - | FolD bifunctional protein TERM 1239 822163 - 822177 + g 74 -10 -2.62515 | overlap 822165 TCATTGGCCCAACGC CACCAG GGA CTGGTG TAATGTAAGCCGCTT fucP 824757 - 823471 - | L-fucose permease TERM 1240 824497 - 824485 - G 78 -3.4 -5.45802 | TGGCCAAAATAAAAA TGCA CCTAT TGCA TAAAGAGCAAGCCCC fucA 825446 - 824796 - | L-fuculose phosphate aldolase fucU 825900 - 825466 - | fucose operon protein FucU fucK 827326 - 825914 - | L-fuculokinase TERM 1241 826563 - 826551 - G 70 -9.1 -3.14978 | overlap 826547 826549 CCAGAACTTAACACA GGCTG ATT CAGCC CTGCACCAGACCCAA TERM 1242 827341 - 827374 + r 95 -9 -5.24129 | TAAAAACTCTCCTCA GTGCAGTCAAAAAT CCTTAT GTTTTTGACCGCAC TTTTTTATAAAAACA fucI 829168 - 827399 - | L-fucose isomerase fucR 830147 - 829398 - | L-fucose operon activator TERM 1243 832182 - 832161 - g 79 -7.3 -4.60487 | opp_overlap 832161 GACGAGTTGGAAAAA GTGCGGT CAAATTCT ACCGCAC TTTCAGAGAATGAAT TERM 1244 832250 - 832239 - g 71 -4.4 -4.83169 | ACTGTGCGAGAAAAA CTCA AGAT TGAG TTAGAAAAAGGGCGA hepA 830346 - 833117 + | ATP-dependent helicase HepA rluA 833120 - 833779 + | hypothetical protein TERM 1245 833853 - 833865 + G 70 -9.1 -3.12943 | overlap 833852 833849 CACGCTAATTCTCAC CGCAC TTT GTGCG CTTATTTATATTGCT glpG 833806 - 834384 + | hypothetical protein TERM 1246 835077 - 835041 - g 78 -9.6 -3.62096 | gap 1, opp_overlap 835045 835046, overlap 835045 GCCGATCACTCTAAA TTTACTCG-CCAAGCGA TTGT TCGCTTGGGCGAATTAA GTGATGTGGAATATT TERM 1247 835073 - 835045 - g 76 -10.4 -2.65532 | gap 1, opp_overlap 835045 835046, overlap 835041 ATCACTCTAAATTTA CTCG-CCAAGCGA TTGT TCGCTTGGGCGAA TTAAGTGATGTGGAA glpR 834414 - 835181 + | glycerol-3-phosphate regulon repressor TERM 1248 835435 - 835453 + T 95 -13.2 -3.80461 | opp_overlap 835435 GCTTAGATAAGAAAA TCCCTTGC TGG GCAAGGGA TTTAGTAATGGGTTA TERM 1249 835453 - 835435 - T 100 -13.2 -4.84311 | opp_overlap 835435 GCTTAGATAAGAAAA TCCCTTGC TGG GCAAGGGA TTTAGTAATGGGTTA metQ 836304 - 835483 - | putative D-methionine-binding lipoprotein MetQ metI 837032 - 836343 - | D-methionine transport system permease protein metN 838059 - 837022 - | DL-methionine transporter ATP-binding subunit TERM 1250 838416 - 838426 + G 72 -5.4 -4.66833 | CACGTGGTTATTTTT CTGA GGA TCAG TTTTTACAATTAACA NTHI0880 838235 - 838789 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 1251 838908 - 838955 + F 70 -2.3 -5.32699 | gap 3, opp_overlap 838897, overlap 838911 ATAATGCACCGCACA CAACGACGCACTGTTGTGAAGTTT TTT AAGTTTC-CAA--GTGCGTCGTTA TTTTTTGCTCTTTAA TERM 1252 839068 - 839087 + F 81 -5.8 -5.0065 | TAACTGAAAATTCAT CATTACTT TTTT AAGTAGTG TTTTATTTATAGCTA TERM 1253 840634 - 840651 + F 74 -9.1 -3.07291 | opp_overlap 840634 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 1254 841075 - 841096 + F 76 -3.9 -5.24291 | TAGGTTATTGTTATT TTAAGTTTA ATTT TAAATTTAA TTTTGTTTTAGTTTT TERM 1255 842896 - 842882 - f 80 -7.1 -4.58213 | overlap 842893 TAAGTAACGATAAAA CGGGT GAAAA ACCCG TTCGCCGGAAGACCA TERM 1256 844902 - 844923 + F 95 -8.7 -5.75538 | opp_overlap 844902 844899 ATAAAAACAGAAGAA CCCCGTGTC GAAA GATATGGGG TTTTTGTTTTTTAGA NTHI0881 845041 - 845601 + | hypothetical protein NTHI0882 845605 - 846045 + | hypothetical protein TERM 1257 846090 - 846068 - T 100 -9.9 -5.29846 | opp_overlap 846068 AATTTTAAAGAAAAA TGCGCTAAG TCTCT CCTAGCGCA TTTTTTATGATTATT TERM 1258 846068 - 846090 + T 93 -7.7 -5.4111 | opp_overlap 846068 AATTTTAAAGAAAAA TGCGCTAAG TCTCT CCTAGCGCA TTTTTTATGATTATT narP 846733 - 846107 - | nitrate/nitrite response regulator protein TERM 1259 846886 - 846919 + r 88 -7.5 -5.0538 | opp_overlap 846886 846888, overlap 846888 ATAAAAATAGAAAAA GTGCGGTAGAAAAAT AGAT AATTTTTTACCGCTC TTTTTTAAGATAAGA TERM 1260 846919 - 846886 - R 84 -6.2 -5.38398 | gap 1, opp_overlap 846886 846888, overlap 846888 ATAAAAATAGAAAAA GTGCGGTAGAAAAAT AGATA ATTTTT-TACCGCTC TTTTTTAAGATAAGA TERM 1261 846888 - 846917 + r 85 -8.7 -4.15748 | opp_overlap 846886 846888, overlap 846886 AAAAATAGAAAAAGT GCGGTAGAAAAAT AGAT AATTTTTTACCGC TCTTTTTTAAGATAA lysA 848186 - 846939 - | diaminopimelate decarboxylase NTHI0885 848365 - 848234 - | hypothetical protein TERM 1262 848380 - 848403 + H 93 -9.6 -4.13654 | opp_overlap 848378 CTTATCGGTAAATCC GCCTTTCACA AGCT TGAGAAAGGC TTTATAATTTGCCAC cyaY 848448 - 848753 + | frataxin-like protein TERM 1263 849761 - 849772 + G 76 -3.6 -5.18371 | overlap 849759 849758 GACGTGATGATTTGC CTGC CGAG GCGG TTTTGTTTTATGAAC TERM 1264 849827 - 849815 - g 73 -2.7 -5.24129 | CTTGGTTACAAAAAA TTCTC TTC GAAAA ACCAGAAACGCCACA recQ 848755 - 850614 + | ATP-dependent DNA helicase RecQ TERM 1265 850645 - 850624 - f 85 -8.7 -4.15106 | opp_overlap 850624 GACTAAGTGTTAAAA GTGCGGTTA AAAA TGACCGCAC TTTTTGTTATACTTG TERM 1266 850624 - 850645 + F 100 -10.9 -5.24416 | opp_overlap 850624 GACTAAGTGTTAAAA GTGCGGTTA AAAA TGACCGCAC TTTTTGTTATACTTG proS 850699 - 852417 + | prolyl-tRNA synthetase TERM 1267 852470 - 852449 - T 89 -8.7 -4.39426 | opp_overlap 852449 TATATTGTGACAAAA GAGCGGTTA AAAA TAGCCGCTC TTTTTGTTGATCTAA TERM 1268 852449 - 852470 + T 100 -10.9 -5.16841 | opp_overlap 852449 TATATTGTGACAAAA GAGCGGTTA AAAA TAGCCGCTC TTTTTGTTGATCTAA ostA 854853 - 852505 - | organic solvent tolerance protein TERM 1269 852899 - 852919 + g 81 -4.2 -5.43866 | opp_overlap 852902 TGGTTCACATATCGA TAATTTAA CTGAA TTAAATTA TTTTTTTCAGGATTA sufI 856385 - 854976 - | hypothetical protein TERM 1270 855069 - 855091 + g 75 -2.1 -5.42198 | overlap 855070 GCCAGAAGATGCTTG ATCAAATTT CACTA AAATTTGAG TTTTGTTTTTTACCC plsC 857109 - 856387 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1271 857426 - 857438 + G 70 -9.1 -3.20119 | overlap 857425 CAATGTTATTTTCAG CACGG TAA CCGTG ATTTCTTAATTGGTG lpxH 857195 - 857908 + | UDP-2,3-diacylglucosamine hydrolase TERM 1272 858017 - 857974 - T 74 -6.3 -4.431 | gap 1, overlap 857975 857976 TACTTATCCATAAAA TC-GTACCTAAAAGCTGG TGGATAAGC CCAACTTTTAGATACAGA TAAAAGTGCGGTTAA TERM 1273 858014 - 857976 - T 72 -9.1 -2.54745 | overlap 857975 857974 CTTATCCATAAAATC GTACCTAAAAGCTGG TGGATAAGC CCAACTTTTAGATAC AGATAAAAGTGCGGT NTHI0893 859664 - 858138 - | putative sodium-dependent transporter TERM 1274 859438 - 859424 - G 80 -7.8 -4.36554 | overlap 859425 CACGACGATAAGAAA GTGGCG CAC CACCAC GATGACGGTGCCCAA TERM 1275 859452 - 859425 - G 74 -9.2 -3.2121 | gap 1, opp_overlap 859447, overlap 859424 ACGACGATAAGAAAG TGGCGCACCACCA CGA TGACGGTGC-CCA ATGGCATAATCTAGG TERM 1276 859699 - 859686 - H 79 -3.9 -5.47218 | TCCTATGTAAAAAAA TGAAA AGAG TTTCA ATATAATGAAATCTA ilvG 859911 - 860537 + | acetolactate synthase isozyme II large subunit TERM 1277 862322 - 862304 - g 73 -4.5 -4.93316 | GAACAAGATCAAAAA GGTTGGC AGCCA GCTAACC GTGAACGTGAAGTAT ilvD 860579 - 862417 + | dihydroxy-acid dehydratase thd1 862497 - 864038 + | threonine dehydratase TERM 1278 864069 - 864050 - T 100 -9.3 -4.87786 | opp_overlap 864050 TTAATCTTATAAAAA GGCGTGA TATTTT TCACGCC TTTGTCTTATTCAAA TERM 1279 864050 - 864069 + T 93 -9.3 -4.34263 | opp_overlap 864050 TTAATCTTATAAAAA GGCGTGA TATTTT TCACGCC TTTGTCTTATTCAAA dnaE 867555 - 864076 - | DNA polymerase III subunit alpha TERM 1280 867319 - 867332 + g 71 -3.1 -5.10154 | gap 1 ATCAAAGTATTCATC GCCACA TAA TG-GGC TTTTTACTTTTACAT pgmB 867794 - 869437 + | phosphoglucomutase secB 870113 - 869604 - | preprotein translocase subunit SecB TERM 1281 869981 - 869971 - G 72 -5.4 -4.54727 | opp_overlap 869966 869965 869965, overlap 869966 GTGCTTAAATCAAAA CCAA GTT TTGG TTTCCATTCTTGTTG NTHI0901 870573 - 870127 - | rhodanese-related sulfurtransferase TERM 1282 870657 - 870647 - H 76 -2.6 -5.41143 | TATCTTTCAAAAAAA TATT CAA AATA TAGAATACATTAAAT dcuB 870821 - 872143 + | anaerobic C4-dicarboxylate transporter TERM 1283 872156 - 872193 + F 100 -14.5 -3.47345 | gap 1, opp_overlap 872159 872163 872166, overlap 872159 872166 TAAAATGTGATTCGA TAACAAAGAACGGTGCTG AAA TAGCACCGTT-TTTGTTA TTCTAATATCAACTT TERM 1284 872190 - 872159 - f 86 -11.1 -3.3334 | gap 1, opp_overlap 872156 872159 872166, overlap 872163 872166 AATGTGATTCGATAA CAAAGAACGGTGCT GAAAT AGCACCGTT-TTTG TTATTCTAATATCAA TERM 1285 872159 - 872190 + F 91 -11.8 -3.87104 | gap 1, opp_overlap 872159 872163 872166, overlap 872156 872166 AATGTGATTCGATAA CAAAGAACGGTGCTG AAA TAGCACCGTT-TTTG TTATTCTAATATCAA TERM 1286 872187 - 872163 - f 89 -8.6 -4.32177 | opp_overlap 872159 872156 872166, overlap 872159 872166 TGATTCGATAACAAA GAACGGTGCT GAAAT AGCACCGTTT TTGTTATTCTAATAT TERM 1287 872184 - 872166 - f 100 -10.3 -4.27512 | opp_overlap 872159 872156 872166, overlap 872163 872159 TTCGATAACAAAGAA CGGTGCT GAAAT AGCACCG TTTTTGTTATTCTAA TERM 1288 872166 - 872184 + F 100 -11 -5.34365 | opp_overlap 872166 872163 872159, overlap 872159 872156 TTCGATAACAAAGAA CGGTGCTG AAA TAGCACCG TTTTTGTTATTCTAA TERM 1289 872255 - 872226 - f 100 -10.9 -5.57054 | opp_overlap 872226 AATAACTCAAAAAAA TAACCGCACTT TGATATAT AAGTGCGGTTA TTTTTATGAAAGTTT TERM 1290 872226 - 872255 + F 100 -10.9 -4.86033 | opp_overlap 872226 AATAACTCAAAAAAA TAACCGCACTT TGATATAT AAGTGCGGTTA TTTTTATGAAAGTTT TERM 1291 873399 - 873417 + G 79 -9 -3.92542 | AATGGCAAAGGCTTG TGCAAAAA ATA TTTTTGCA TTGTTTGAAAATAAA ndhA 872347 - 873681 + | NADH dehydrogenase TERM 1292 873749 - 873733 - T 100 -12.3 -4.83243 | opp_overlap 873730 873729 TTTATATAAAAGAAA GGGCATC AAT GATGCCC TCAGTATTGTTTTAT plsB 876193 - 873761 - | glycerol-3-phosphate acyltransferase lexA 876442 - 877071 + | LexA repressor TERM 1293 877090 - 877130 + F 100 -15.1 -2.64747 | opp_overlap 877094, overlap 877094 877123 GGTACCAAGAATGAA TAAAGTGCGGTAAAAAT TTACGGT ATTTTTACCGCACTTTG CTTATACTAGAGTGC TERM 1294 877126 - 877094 - f 100 -13.7 -4.39877 | opp_overlap 877090 877094 877123 CCAAGAATGAATAAA GTGCGGTAAAAAT TTACGGT ATTTTTACCGCAC TTTGCTTATACTAGA TERM 1295 877094 - 877126 + F 100 -13.7 -4.02108 | opp_overlap 877094, overlap 877090 877123 CCAAGAATGAATAAA GTGCGGTAAAAAT TTACGGT ATTTTTACCGCAC TTTGCTTATACTAGA TERM 1296 877233 - 877215 - g 71 -4.6 -4.72386 | overlap 877207 CAAAGGATGGAAAAA TGCAGTTT TCC AAAATGCA CGGATTAGGTAACGA TERM 1297 877674 - 877692 + G 75 -9.6 -3.22475 | overlap 877677 TATGTGGTGCAGTTT CAATGGGG AAT CCTCATTG TGTTGTACAAGTAGA dapF 877214 - 878038 + | diaminopimelate epimerase TERM 1298 878214 - 878239 + T 72 -6.1 -4.36485 | opp_overlap 878201 878220, overlap 878217 878220 GATTATTAGCATAAT AAAAAACCGCC TCTC GGCGGTTCTTG TTTTAAATCTTTTAT TERM 1299 878217 - 878236 + T 78 -7.8 -4.2651 | opp_overlap 878220, overlap 878214 878220 TATTAGCATAATAAA AAACCGCC TCTC GGCGGTTC TTGTTTTAAATCTTT TERM 1300 878220 - 878233 + T 89 -9.5 -4.22475 | opp_overlap 878220, overlap 878217 878214 TAGCATAATAAAAAA CCGCC TCTC GGCGG TTCTTGTTTTAAATC TERM 1301 878233 - 878220 - T 100 -9.5 -5.58179 | opp_overlap 878217 878214 878220 TAGCATAATAAAAAA CCGCC TCTC GGCGG TTCTTGTTTTAAATC tpx 878755 - 878258 - | thiol peroxidase TERM 1302 879491 - 879505 + G 70 -5 -4.63218 | overlap 879502 TATTACGTCAGTTTA TGCAGA GTA TTTGCA TTTTGTTGAACAAAA purL 879318 - 883280 + | phosphoribosylformylglycinamidine synthase TERM 1303 883315 - 883337 + F 77 -10 -2.97 | opp_overlap 883312 GGTTAAAAAAGTGCG GTGGAAATCT GGC AGATTTTCAC TGTGTGCGTTACTTT lex2B 883786 - 884529 + | UDP-glucose--lipooligosaccharide glucosyltransferase TERM 1304 884552 - 884587 + T 100 -12.2 -5.10163 | opp_overlap 884552 884551 884554 ATATAGTAGACAAAG CAGTTGTTAATGTTTA TTTT TAAATATTAGCAACTG TTTTATTTTGGAATT NTHI0914 885432 - 884590 - | hypothetical protein TERM 1305 885421 - 885370 - G 72 -6.1 -4.37486 | opp_overlap 885378, overlap 885372 885378 AGCAAAAGAAAAAGA GGTATAAAGTGCGGTAGAAAA AACAATGAAA TTTTTTACCGCACTTTTTATC AGAATATTCATCAAC TERM 1306 885378 - 885413 + g 87 -8.5 -4.84761 | opp_overlap 885378 885372 885370 AAAAAGAGGTATAAA GTGCGGTAGAAAA AACAATGAAA TTTTTTACCGCAC TTTTTATCAGAATAT NTHI0915 886664 - 885432 - | membrane-bound metallopeptidase gpmA 886840 - 887523 + | phosphoglyceromutase TERM 1307 887587 - 887560 - T 100 -9.9 -4.42788 | opp_overlap 887565, overlap 887565 TCTAACTGTATAAAA CAAAACCCCGC AAATTA GCGGGGTTTTT AAACAAGTCCAAATT TERM 1308 887582 - 887565 - T 100 -9.8 -5.18371 | opp_overlap 887565, overlap 887560 CTGTATAAAACAAAA CCCCGC AAATTA GCGGGG TTTTTAAACAAGTCC TERM 1309 887565 - 887582 + T 100 -9.8 -4.57569 | opp_overlap 887565 887560 CTGTATAAAACAAAA CCCCGC AAATTA GCGGGG TTTTTAAACAAGTCC rpmE 887813 - 887601 - | 50S ribosomal protein L31 TERM 1310 887833 - 887821 - H 73 -4.1 -4.96848 | TGTTTCATAGAAAAA CCTCA AAA TGAAG CCACGCCGCTATAGG TERM 1311 888142 - 888132 - g 71 -6.8 -4.16016 | TGATGTTGCAACAAA CGCA AGT TGCG ACGGTAATTCCTTAT TERM 1312 888665 - 888649 - g 70 -5.1 -4.60808 | TTATAAAAATACAAA CTGGGAA AAA TTTCCAG CTAAAAAACCTAAAA mutY 887990 - 889126 + | A/G-specific adenine glycosylase NTHI0920 889104 - 889376 + | hypothetical protein TERM 1313 889411 - 889422 + G 85 -5.8 -5.42131 | AAAATATTTATTATT GGCA TTAT TGCC TTTTTTGTATGCTTG mltC 889391 - 890464 + | murein transglycosylase C TERM 1314 890490 - 890515 + T 84 -5.4 -5.4505 | opp_overlap 890490 TCAGATAATCAAAAA TGCTCGCTGG CTAACA CCATTGAGCA TTTTTTATTAAAAAA TERM 1315 890515 - 890490 - T 70 -3.9 -4.96646 | opp_overlap 890490 TCAGATAATCAAAAA TGCTCGCTGGC TAAC ACCATTGAGCA TTTTTTATTAAAAAA TERM 1316 890745 - 890729 - T 81 -10.9 -2.62616 | opp_overlap 890742, overlap 890742 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCGGTGGTTCGA TERM 1317 890890 - 890867 - T 87 -9.6 -4.02534 | opp_overlap 890868, overlap 890868 AGCCAAATTTAGAAA GGCCGCTAAA GAGA TTTAGCGGCT TTTTGCTTTCTTATA TERM 1318 890889 - 890868 - T 88 -13.1 -3.00797 | opp_overlap 890868, overlap 890867 GCCAAATTTAGAAAG GCCGCTAAA GAGA TTTAGCGGC TTTTTGCTTTCTTAT TERM 1319 890868 - 890889 + T 100 -13.1 -5.10877 | opp_overlap 890868 890867 GCCAAATTTAGAAAG GCCGCTAAA GAGA TTTAGCGGC TTTTTGCTTTCTTAT TERM 1320 891004 - 891027 + T 90 -11 -3.75153 | opp_overlap 891009, overlap 891005 CTTATTTTTGATGTT AGCAAGCGAC CTAA GTCGCTTGCG TTTAACTTAAAGAAG TERM 1321 891005 - 891026 + T 95 -14.5 -2.84878 | opp_overlap 891009, overlap 891004 TTATTTTTGATGTTA GCAAGCGAC CTAA GTCGCTTGC GTTTAACTTAAAGAA TERM 1322 891022 - 891009 - T 70 -8.1 -3.16564 | opp_overlap 891005 891004 TTTTGATGTTAGCAA GCGAC CTAA GTCGC TTGCGTTTAACTTAA NTHI0922 891755 - 891075 - | diadenosine tetraphosphatase and related serine/threonine protein phosphatase TERM 1323 891464 - 891429 - G 73 -2.5 -5.2112 | opp_overlap 891439 AATAGGATCAAAAAA CATGGGGCGATTTGG TGGCAT CCAAATTTGCCCACG GAATACACCGCCTAA nadR 893017 - 891752 - | nicotinamide-nucleotide adenylyltransferase TERM 1324 893167 - 893148 - H 83 -6.4 -4.95302 | opp_overlap 893148 TGAAAGAGAATAAAA CGAGTTGG GTTC CCAAATCG TTCATTTTATTTGCA ribB 893236 - 893883 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 1325 893927 - 893893 - f 82 -8.6 -3.97102 | opp_overlap 893893 ATTTAAAACGAAGAA GTGCGGTGAAAATTTC TAT GATTTTTTTACCGCAC TTTTTATATTATACT TERM 1326 893893 - 893927 + F 100 -10.8 -5.16133 | opp_overlap 893893 ATTTAAAACGAAGAA GTGCGGTGAAAATTTC TAT GATTTTTTTACCGCAC TTTTTATATTATACT TERM 1327 894501 - 894489 - g 76 -4.8 -5.0917 | TTAGTAAAAAATAAA CCAC TTGAC GTGG CGGTTGATTCACTTG TERM 1328 894730 - 894718 - g 85 -4.9 -5.65496 | opp_overlap 894722 GAGTAAAAATAAAAA TGTTT GGA AAACA AGTTCCATTTAAATA lpsA 893898 - 894746 + | lipooligosaccharide glycosyl transferase TERM 1329 894740 - 894797 + T 91 -11.9 -3.57783 | gap 1, opp_overlap 894747 894752, overlap 894752 AAAACAAGTTCCATT TAAATAATAAAAGTGCGGTTAAAAAT CTTATTA AATTTTAACCGCACTTTT-TTGTTTA TTCTACTTCTGGTAA TERM 1330 894791 - 894747 - T 93 -11 -3.96216 | opp_overlap 894740 894752, overlap 894752 GTTCCATTTAAATAA TAAAAGTGCGGTTAAAAATC TTATT AAATTTTAACCGCACTTTTT TGTTTATTCTACTTC TERM 1331 894786 - 894752 - T 100 -10.9 -5.011 | opp_overlap 894740 894752, overlap 894747 ATTTAAATAATAAAA GTGCGGTTAAAAATC TTATT AAATTTTAACCGCAC TTTTTTGTTTATTCT TERM 1332 894752 - 894786 + T 100 -10.2 -5.82036 | opp_overlap 894752 894747, overlap 894740 ATTTAAATAATAAAA GTGCGGTTAAAAAT CTTATTA AATTTTAACCGCAC TTTTTTGTTTATTCT NTHI0927 895277 - 894795 - | putative RNA methyltransferase NTHI0928 895868 - 895287 - | hypothetical protein TERM 1333 895635 - 895655 + g 76 -10.5 -2.71364 | opp_overlap 895634 895632 895631 TTCTAAAAAAGTCAC CTTTTTCGC TTG GCGAGAAAG TGCTTCAAAACCTAA ftsY 895923 - 897167 + | cell division protein FtsY ftsE 897186 - 897842 + | cell division ATP-binding protein FtsE ftsX 897852 - 898784 + | cell division protein FtsX TERM 1334 898831 - 898798 - T 100 -12.7 -4.35518 | opp_overlap 898803 898822, overlap 898803 AATTGGATATCAAAA GAAAAGCGAATTTCT TAAA AGAAATTCGCTTTTT TAGTTAGAAGTGAAA TERM 1335 898803 - 898826 + T 100 -12.6 -5.26875 | opp_overlap 898798 898803, overlap 898822 GATATCAAAAGAAAA GCGAATTTCT TAAA AGAAATTCGC TTTTTTAGTTAGAAG TERM 1336 898826 - 898803 - T 100 -12.6 -5.16132 | opp_overlap 898803 898822, overlap 898798 GATATCAAAAGAAAA GCGAATTTCT TAAA AGAAATTCGC TTTTTTAGTTAGAAG atoB 900060 - 898879 - | acetyl-CoA acetyltransferase TERM 1337 899303 - 899292 - G 70 -5.8 -4.32402 | CGCTAACTAAAATAA GTGC TGCA GCAC CATCATTAATGCCAG atoE 901418 - 900075 - | short-chain fatty acids transporter TERM 1338 900205 - 900195 - G 71 -6.8 -4.14392 | opp_overlap 900193 900195 900195, overlap 900196 TGGTAATGCCCAAAA TGGC TGA GCCA TGTTCATCCATTGCT atoA 902086 - 901421 - | acetate CoA-transferase beta subunit TERM 1339 901854 - 901836 - G 72 -2.4 -5.34381 | AAAGCGAAAGAAAAA GCACTA TCAAAAG TAGCGC CGCCTTTTTTAATTC atoD 902750 - 902097 - | acetyl-CoA:acetoacetyl-CoA transferase subunit alpha TERM 1340 902705 - 902685 - G 70 -6.9 -3.83169 | opp_overlap 902678 CATAAATCCACCAAA CATGATGCT CAT ACCATCATG TAGGTGTTGATTTAG NTHI0936 902956 - 903903 + | putative HTH-type transcriptional regulator TERM 1341 903974 - 903945 - f 75 -8.7 -3.48276 | gap 1, opp_overlap 903949, overlap 903949 TGTCTTTCTATAGAA TACACGGACTCTCA ATA TGAGAG-CCGTTTA ATGTAATCATTTATT TERM 1342 903970 - 903949 - f 77 -9.5 -3.22618 | gap 1, opp_overlap 903949, overlap 903945 TTTCTATAGAATACA CGGACTCTCA ATA TGAGAG-CCG TTTAATGTAATCATT TERM 1343 903949 - 903970 + F 81 -9.5 -3.87318 | gap 1, opp_overlap 903945 903949 TTTCTATAGAATACA CGGACTCTCA ATA TGAGAG-CCG TTTAATGTAATCATT rpsJ 904140 - 904451 + | 30S ribosomal protein S10 rplC 904468 - 905094 + | 50S ribosomal protein L3 rplD 905110 - 905712 + | 50S ribosomal protein L4 rplW 905709 - 906008 + | 50S ribosomal protein L23 rplB 906026 - 906847 + | 50S ribosomal protein L2 TERM 1344 906974 - 906960 - g 73 -2.8 -5.24531 | AGCGGGGATAAAAAA CCAATT AAA ACTTGG TCCCGTCGTTCAATG TERM 1345 907125 - 907112 - g 72 -9.5 -2.88663 | ACCGACTCGTACATA CCGCG GTCA CGCGG CAGATAAGAAAGCTA rpsS 906873 - 907148 + | 30S ribosomal protein S19 rplV 907160 - 907492 + | 50S ribosomal protein L22 rpsC 907510 - 908217 + | 30S ribosomal protein S3 rplP 908231 - 908641 + | 50S ribosomal protein L16 rpmC 908641 - 908832 + | 50S ribosomal protein L29 TERM 1346 909050 - 909040 - g 74 -5.4 -4.72272 | opp_overlap 909049 GCCCTCTATCAAAAA CCAA ATC TTGG ACTTTAGTTCGTGTT rpsQ 908832 - 909089 + | 30S ribosomal protein S17 TERM 1347 909144 - 909112 - f 83 -7.9 -4.81163 | opp_overlap 909117, overlap 909117 CAAAGAGTAATAAAA TAAAAGCCAATAG TGTAAAT CTATTGGCTTTTT TGTTTTTAAAGTGCG TERM 1348 909139 - 909117 - f 89 -7.8 -5.28831 | opp_overlap 909117, overlap 909112 AGTAATAAAATAAAA GCCAATAG TGTAAAT CTATTGGC TTTTTTGTTTTTAAA TERM 1349 909117 - 909139 + F 100 -7.8 -5.93252 | opp_overlap 909112 909117 AGTAATAAAATAAAA GCCAATAG TGTAAAT CTATTGGC TTTTTTGTTTTTAAA TERM 1350 909155 - 909187 + F 100 -20.9 -5.48213 | opp_overlap 909155 TTTTTTGTTTTTAAA GTGCGGTTAAAATTC AAT GAATTTTAACCGCAC TTTTTCTTTTAGGTG TERM 1351 909187 - 909155 - f 100 -20.9 -3.53012 | opp_overlap 909155 TTTTTTGTTTTTAAA GTGCGGTTAAAATTC AAT GAATTTTAACCGCAC TTTTTCTTTTAGGTG TERM 1352 909249 - 909239 - f 76 -2.6 -5.54264 | AAATACTGAAAAAAA TATT TTT AATA ATGGTACTTAAGAGA NTHI0950 909479 - 910102 + | hypothetical protein rplN 910383 - 910754 + | 50S ribosomal protein L14 rplX 910765 - 911076 + | 50S ribosomal protein L24 rplE 911094 - 911633 + | 50S ribosomal protein L5 rpsN 911645 - 911950 + | 30S ribosomal protein S14 rpsH 911987 - 912379 + | 30S ribosomal protein S8 TERM 1353 912501 - 912484 - g 76 -5.5 -4.88222 | opp_overlap 912483, overlap 912486 AGTAAAAGGTAAAAA TGGCGAG TTAT CTCGCAA AATTCATGAATCAGT rplF 912395 - 912928 + | 50S ribosomal protein L6 TERM 1354 913160 - 913148 - g 70 -7.7 -3.68324 | overlap 913146 CACCGGTAATAAAGA TGCTG CTG CAGCA GTCGGTAAAGCTGTT rplR 912942 - 913295 + | 50S ribosomal protein L18 rpsE 913310 - 913810 + | 30S ribosomal protein S5 rpmD 913817 - 913996 + | 50S ribosomal protein L30 TERM 1355 914226 - 914210 - g 86 -10.9 -3.91911 | opp_overlap 914209 914206 914205 TTTACTTCAATGAAA TCTGCAG TGA CTGCAGA AGTTCGTTTAAATGA rplO 914000 - 914434 + | 50S ribosomal protein L15 TERM 1356 915545 - 915520 - g 75 -7.7 -4.1552 | opp_overlap 915542 GACCCGGTGAACAAA CATCACGTTAT ATTG ATAAAGTGATG ACTCGTCTTACATTA secY 914442 - 915767 + | preprotein translocase subunit SecY TERM 1357 915957 - 915935 - f 73 -9.2 -2.93073 | opp_overlap 915935 915932, overlap 915932 TCTTGCCAAGAACCA GTTGAGTAGT TAT ACTGCTCAAC TCATTTATGTCCTTG TERM 1358 915935 - 915957 + F 84 -11.4 -3.08947 | opp_overlap 915932 915935, overlap 915932 TCTTGCCAAGAACCA GTTGAGTAGT TAT ACTGCTCAAC TCATTTATGTCCTTG rpsM 916049 - 916405 + | 30S ribosomal protein S13 rpsK 916421 - 916810 + | 30S ribosomal protein S11 TERM 1359 916814 - 916799 - f 71 -3.2 -5.08824 | CGTCCACCGAAAAAA CGTCGT GTTT AAGACG TATAGGATAGTTGGA TERM 1360 916983 - 916999 + G 73 -9.5 -3.05384 | GTAAACCGCGTTTGT CTGACTA TGG TAGTCAG TTACGTGAAAAACAA TERM 1361 917351 - 917339 - g 76 -4.1 -5.22289 | GAGCAAAGAGAAAAA CCAAC ATG GTTAG AAGTTGATTCTGCAA rpsD 916838 - 917458 + | 30S ribosomal protein S4 TERM 1362 917498 - 917510 + G 74 -6.3 -4.56775 | GGATAAAATGCAGGG TTCTG TTA CAGAA TTTTTAAAACCACGT TERM 1363 918240 - 918225 - g 73 -2.5 -5.20534 | opp_overlap 918226, overlap 918226 ATTAAGGAAGAAAAA CCGGA ATTTGA TCCGA TTTTATTACGTCCTG TERM 1364 918400 - 918361 - g 71 -4.4 -4.8269 | opp_overlap 918361 918362, overlap 918362 TAGAATTATTAAAAA CCCCTAATCTTGGTAAGA AATC TCTTACTGAAATTAAGGA TGTTCTTGCTTCTCG rpoA 917490 - 918476 + | DNA-directed RNA polymerase subunit alpha rplQ 918517 - 918903 + | 50S ribosomal protein L17 TERM 1365 918923 - 918942 + T 91 -5.7 -5.8901 | opp_overlap 918923 TAATTCTAAAAAGAA GCTCACT TTATAT AGTGGGC TTTTTTATTTTATAT NTHI0967 919626 - 919030 - | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase TERM 1366 920125 - 920109 - H 93 -9.5 -4.38876 | CGAAAAATACATAAA CTTGGTT GTA AACCAAG GTAAGCCATAAACCA TERM 1367 920808 - 920796 - g 74 -4.9 -4.88217 | opp_overlap 920796 920794 AGCAAAAAATTAAAA TTGAT TAT ATCAA TATGATTTTATGGTC NTHI0970 920579 - 921388 + | permease TERM 1368 921423 - 921399 - T 78 -7.2 -4.29929 | opp_overlap 921400, overlap 921400 ATTAAATCGAATAAA CTAGACCTAG TTATT CTAGGTCTAT TCTCTAATTAGTGTT TERM 1369 921400 - 921422 + T 89 -10.7 -3.61806 | opp_overlap 921399 921400 TTAAATCGAATAAAC TAGACCTAG TTATT CTAGGTCTA TTCTCTAATTAGTGT TERM 1370 921422 - 921400 - T 86 -10.7 -3.16873 | opp_overlap 921400, overlap 921399 TTAAATCGAATAAAC TAGACCTAG TTATT CTAGGTCTA TTCTCTAATTAGTGT dxr 922613 - 921420 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1371 922678 - 922711 + r 82 -5.3 -5.2189 | opp_overlap 922685, overlap 922680 922685 TTCGCATACCTAATA AAATAAAGGCAGACA AAAC TGTCTGCCTTTCGTA TTTTTTGATGATTAG TERM 1372 922680 - 922709 + r 78 -7.9 -4.23218 | opp_overlap 922685, overlap 922678 922685 CGCATACCTAATAAA ATAAAGGCAGACA AAAC TGTCTGCCTTTCG TATTTTTTGATGATT TERM 1373 922704 - 922685 - R 100 -12.2 -4.88795 | opp_overlap 922680 922678 922685 ACCTAATAAAATAAA GGCAGACA AAAC TGTCTGCC TTTCGTATTTTTTGA TERM 1374 922685 - 922704 + r 100 -12.2 -4.18668 | opp_overlap 922685, overlap 922680 922678 ACCTAATAAAATAAA GGCAGACA AAAC TGTCTGCC TTTCGTATTTTTTGA frr 923280 - 922723 - | ribosome recycling factor TERM 1375 923412 - 923381 - R 100 -10.2 -5.53079 | opp_overlap 923380 923381 923384, overlap 923384 AAAACAGATAAAAAA TGACCGCACTTCAG TTAC CCAAAGTGCGGTTA ATATTTTTAGTATTT TERM 1376 923409 - 923384 - R 90 -11.9 -3.48985 | opp_overlap 923381 923380 923384, overlap 923381 ACAGATAAAAAATGA CCGCACTTCAG TTAC CCAAAGTGCGG TTAATATTTTTAGTA TERM 1377 923384 - 923409 + r 71 -7.5 -3.62531 | opp_overlap 923384 923381, overlap 923381 923380 ACAGATAAAAAATGA CCGCACTTCAG TTAC CCAAAGTGCGG TTAATATTTTTAGTA pckA 925048 - 923432 - | phosphoenolpyruvate carboxykinase TERM 1378 924803 - 924819 + g 76 -3.7 -5.21709 | TGTTTCAGATGTCCA CCAAACA GTA TCTTTGG TTTTTTCATCTAACA TERM 1379 925193 - 925217 + r 100 -11.5 -4.67556 | opp_overlap 925196, overlap 925196 TGTGATATAGAGCAA AAATCCCGACA TTG TGTCGGGATTG TTTTTAAACTCTTGT TERM 1380 925214 - 925196 - R 100 -13.2 -4.86133 | opp_overlap 925196 925193 GATATAGAGCAAAAA TCCCGACA TTG TGTCGGGA TTGTTTTTAAACTCT TERM 1381 925196 - 925214 + r 100 -13.2 -4.43351 | opp_overlap 925196, overlap 925193 GATATAGAGCAAAAA TCCCGACA TTG TGTCGGGA TTGTTTTTAAACTCT hslO 926102 - 925221 - | Hsp33-like chaperonin TERM 1382 926122 - 926154 + r 95 -8.6 -4.9934 | opp_overlap 926128, overlap 926128 TATTCCTAATTGAGA TAAAAAGTGCGG TGGTTTTTT CCGCACTTTTTG TTTTTATCATCTTAT TERM 1383 926128 - 926148 + r 86 -5.4 -5.69262 | opp_overlap 926128, overlap 926122 TAATTGAGATAAAAA GTGCGG TGGTTTTTT CCGCAC TTTTTGTTTTTATCA TERM 1384 926148 - 926128 - R 77 -5.4 -5.00642 | opp_overlap 926122 926128 TAATTGAGATAAAAA GTGCGG TGGTTTTTT CCGCAC TTTTTGTTTTTATCA argH 927620 - 926247 - | argininosuccinate lyase TERM 1385 926307 - 926295 - G 70 -9.1 -3.1855 | opp_overlap 926294 926293 TTCGGCAACACGCAA TGGCG ATA CGCCA CCTTTTGCACAACGT TERM 1386 927704 - 927738 + r 100 -10.3 -4.24745 | opp_overlap 927709, overlap 927709 TATTAATAATAAAAC AAAAATGGACAAAAT CTTTC ATTTTGTCCATTTTA TTTGTATTAGTGCTA TERM 1387 927709 - 927733 + r 100 -10.2 -5.10033 | opp_overlap 927709, overlap 927704 ATAATAAAACAAAAA TGGACAAAAT CTTTC ATTTTGTCCA TTTTATTTGTATTAG TERM 1388 927733 - 927709 - R 100 -10.2 -5.64321 | opp_overlap 927704 927709 ATAATAAAACAAAAA TGGACAAAAT CTTTC ATTTTGTCCA TTTTATTTGTATTAG galU 928642 - 927755 - | UTP--glucose-1-phosphate uridylyltransferase TERM 1389 927958 - 927969 + g 84 -5.8 -5.24531 | overlap 927954 GGATTTCATCGCCAA CACC AATT GGTG TTTTTTCTAACAAAT csrA 928855 - 928664 - | carbon storage regulator alaS 931557 - 928933 - | alanyl-tRNA synthetase TERM 1390 929291 - 929304 + g 81 -4.5 -5.45802 | gap 1, opp_overlap 929285 929291, overlap 929293 ACAAAATCAGAACCA GCCTGC ATT GC-GGC TTTTTCTTTTAGACC TERM 1391 930676 - 930666 - G 70 -8.2 -3.33162 | opp_overlap 930665 CATTTGATGGGATAA CGCC ATC GGCG ATTAAATATGCACAA TERM 1392 931695 - 931664 - R 95 -8.7 -5.10163 | opp_overlap 931659 931658 AACCCCAAAATAAAA CCGCACTTCACGA CGCTAT TTGAGAAGTGCGG TTAAAATTTAAGTTA uspA 932169 - 931744 - | universal stress protein A pepP 933563 - 932271 - | Xaa-Pro aminopeptidase NTHI0981 934123 - 933575 - | hypothetical protein galM 935319 - 934294 - | aldose 1-epimerase galK 936522 - 935326 - | galactokinase TERM 1393 935805 - 935823 + g 74 -9.6 -3.15996 | overlap 935804 CTTCACATTGCTGAC GGCGAGTA TTG TATTCGCC TGTTACTAAATCGTG galT 937606 - 936557 - | galactose-1-phosphate uridylyltransferase TERM 1394 938096 - 938085 - g 75 -4.4 -5.16237 | opp_overlap 938085 AAGCGCATCAAAAAA CGAT TCTT ATCG GTATTGGTTATCATC galR 937814 - 938812 + | HTH-type transcriptional regulator GalR mglB 938903 - 939952 + | D-galactose-binding periplasmic protein precursor TERM 1395 939981 - 939999 + F 100 -10.3 -4.58283 | overlap 939996 TTTGTTGTAGTCTAA GGGGAAG TGGAT CTTCCCC TTTTTAAAGAGGTTG TERM 1396 940616 - 940606 - g 72 -5.4 -4.62475 | opp_overlap 940610, overlap 940610 ATCGACAAATTAAAA CAAC GCG GTTG CGGCATTATTTATAT mglA 940018 - 941538 + | galactose/methyl galaxtoside transporter ATP-binding protein TERM 1397 941585 - 941575 - g 83 -4 -5.60993 | TGCCTTAGAAAAAAA CAAA TCC TTTG ATCTCTTAAAACAAA mglC 941555 - 942565 + | beta-methylgalactoside transporter inner membrane component TERM 1398 942593 - 942620 + F 83 -7.8 -4.68545 | opp_overlap 942593 942598, overlap 942598 CTTAATAAAATGAAT GAAAAGTGGGCA AATT TGTCCACTTTTG TTTTATCTATTCAAT TERM 1399 942615 - 942598 - f 71 -5.5 -4.5528 | opp_overlap 942593 942598, overlap 942593 TAAAATGAATGAAAA GTGGGCA AATT TGTCCAC TTTTGTTTTATCTAT TERM 1400 942598 - 942615 + F 89 -7.7 -5.24647 | opp_overlap 942598 942593, overlap 942593 TAAAATGAATGAAAA GTGGGCA AATT TGTCCAC TTTTGTTTTATCTAT NTHI0990 942711 - 943445 + | hypothetical protein ispZ 943451 - 944008 + | intracellular septation protein A NTHI0992 944008 - 944472 + | putative acyl-CoA thioester hydrolase NTHI0994 944489 - 944785 + | YciI-like protein slt 944801 - 946582 + | putative soluble lytic murein transglycosylase trpR 946620 - 946925 + | Trp operon repressor mtgA 946912 - 947652 + | monofunctional biosynthetic peptidoglycan transglycosylase TERM 1401 947748 - 947706 - T 90 -13.8 -3.10622 | opp_overlap 947713 947720, overlap 947708 947713 947720 AATATTTACTTAATA TATAAAATAAAAAACGAGTC TAA GACTCGTTTTTTTATTTATA ACATTTTTATTACAG TERM 1402 947746 - 947708 - T 85 -12 -3.1082 | opp_overlap 947713 947720, overlap 947706 947713 947720 TATTTACTTAATATA TAAAATAAAAAACGAGTC TAA GACTCGTTTTTTTATTTA TAACATTTTTATTAC TERM 1403 947741 - 947713 - T 100 -11.9 -4.68545 | opp_overlap 947713 947720, overlap 947708 947706 947720 ACTTAATATATAAAA TAAAAAACGAGTC TAA GACTCGTTTTTTT ATTTATAACATTTTT TERM 1404 947713 - 947742 + T 93 -10.3 -3.99013 | gap 1, opp_overlap 947708 947706 947713 947720, overlap 947720 ACTTAATATATAAAA TAAAAAA-CGAGTC TAA GACTCGTTTTTTTA TTTATAACATTTTTA TERM 1405 947720 - 947734 + T 100 -10 -6.02919 | opp_overlap 947713 947708 947706 947720, overlap 947713 ATATAAAATAAAAAA CGAGTC TAA GACTCG TTTTTTTATTTATAA TERM 1406 947734 - 947720 - T 100 -10 -5.8901 | opp_overlap 947720 947713, overlap 947713 947708 947706 ATATAAAATAAAAAA CGAGTC TAA GACTCG TTTTTTTATTTATAA frdD 948102 - 947758 - | fumarate reductase subunit D frdC 948525 - 948115 - | fumarate reductase subunit C frdB 949306 - 948536 - | fumarate reductase iron-sulfur subunit frdA 951098 - 949299 - | fumarate reductase flavoprotein subunit TERM 1407 951146 - 951132 - H 73 -4.2 -5.00388 | opp_overlap 951134, overlap 951134 GAAAGTAAAAATAAA TCCCCT AAA AGGGTA ATATTGTGTGGGCAT TERM 1408 951156 - 951168 + H 77 -3.3 -5.45652 | overlap 951157 AGGGTAATATTGTGT GGGCA TTG TGCCA TTTTTTGTTACAAAT genX 951309 - 952280 + | lysyl-tRNA synthetase TERM 1409 952499 - 952478 - T 74 -2.4 -5.57888 | gap 1, overlap 952479 ATGAAAAAAAGAAAA CCAAAACAT AAGAA ATGTTT-GG ATAGTGAGTTGATTT TERM 1410 952553 - 952527 - T 84 -6 -5.22039 | overlap 952530 952546 TTTAAATTGAAAAAA TAACCTAATTTC ATA AAAATTAGGTGA CTAAAGCGTATCCTT TERM 1411 952550 - 952530 - T 83 -7.7 -4.68528 | overlap 952527 952546 AAATTGAAAAAATAA CCTAATTTC ATA AAAATTAGG TGACTAAAGCGTATC cpxR 953229 - 952546 - | transcriptional regulatory protein CpxR TERM 1412 952589 - 952600 + g 79 -4.4 -5.33848 | opp_overlap 952589 CGTAAAGTTTTAAAC CAAG AGGG CTTG TTTTTTCGTTCTGGT smpA 953696 - 953283 - | small protein A ndpA 954787 - 953762 - | nucleoid-associated protein NdpA TERM 1413 954864 - 954843 - H 73 -3.9 -5.20735 | gap 1 GCAAGAAAAAAGAAA TTATTTAGGT TCT ACC-AAATAA TCGGGTATCATAAGC NTHI1007 954904 - 955122 + | hypothetical protein TERM 1414 955352 - 955371 + G 73 -4.3 -4.89477 | gap 1, overlap 955355 TTTGCGTTGTACTTA CTC-GTGG TCTTT CCACTGAG TTTTATTGTTAAAAA NTHI1008 955124 - 956881 + | hydrolase of alkaline phosphatase superfamily NTHI1009 957079 - 958071 + | hypothetical protein mobA 958788 - 958210 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 1415 958401 - 958389 - G 88 -3.3 -5.69793 | opp_overlap 958389 ACATTAAACAAAAAA CGGGA TGT TCACG TTCTTCATCGCAAGC TERM 1416 958430 - 958451 + g 84 -8.7 -4.41177 | opp_overlap 958420 958430, overlap 958420 GCATACGCAATTAAA GTGCGGTCA TTTT TAACCGCAC TTTTGAGTTTATCTA TERM 1417 958451 - 958430 - G 86 -10.9 -3.94746 | opp_overlap 958420 958430, overlap 958420 GCATACGCAATTAAA GTGCGGTCA TTTT TAACCGCAC TTTTGAGTTTATCTA NTHI1011 958853 - 959119 + | hypothetical protein dsbA 959130 - 959747 + | thiol:disulfide interchange protein DsbA NTHI1013 959809 - 960144 + | hypothetical protein TERM 1418 960176 - 960159 - f 73 -6.9 -3.9578 | opp_overlap 960159 AGATACGTTAAATAA GGCAGGC GGAA GTCTGCC TTTTGTTTTTGAATA TERM 1419 960159 - 960176 + F 100 -9.1 -5.2853 | opp_overlap 960159 AGATACGTTAAATAA GGCAGGC GGAA GTCTGCC TTTTGTTTTTGAATA trmA 960288 - 961379 + | tRNA (uracil-5-)-methyltransferase NTHI1015 961568 - 962134 + | hypothetical protein TERM 1420 962176 - 962166 - g 73 -6.8 -4.28994 | overlap 962167 TATTAGCTATGAAAA TGGC ATT GCCA AAGTGAAATGCCAAT NTHI1016 962128 - 962562 + | positive regulator of sigma E TERM 1421 962927 - 962942 + F 100 -10.4 -4.26188 | opp_overlap 962927, overlap 962938 TTCTTAATTTATTAA CCCCGA TCTT TCGGGG TTTTCCGTATCTAAA TERM 1422 962942 - 962927 - f 83 -10.4 -3.21912 | opp_overlap 962927 962938 TTCTTAATTTATTAA CCCCGA TCTT TCGGGG TTTTCCGTATCTAAA mobB 962963 - 963499 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 1423 963643 - 963653 + G 71 -6.8 -4.11346 | opp_overlap 963623 963642 TTTGAAATGCAAATG GCGA TCA TCGC TTATTCTTTAGCTGT TERM 1424 963777 - 963796 + G 73 -7.2 -4.17048 | gap 1 AGTTGCTTGTGCCGC GGC-CTCTA ATT TAGAGAGCC TTATTTTAGCCCGAG TERM 1425 963976 - 963991 + G 81 -3.2 -5.65513 | overlap 963977 TGGTTAGTCATTCAC GCCAGT TGGC ACTGGA TTTTTTTAATTAATA TERM 1426 964868 - 964857 - g 70 -3 -5.06585 | opp_overlap 964857, overlap 964851 GAAATTACACAAAAA TGAT GGCG ATCA TTTACGAAAAATGCC NTHI1020 963496 - 964887 + | hypothetical protein TERM 1427 965293 - 965274 - g 76 -5 -5.15969 | overlap 965292 GTTGAATTTAAAAAA GGCTCAAC GGAT ATTGAACC AGCTTTAGCTGAAAG TERM 1428 965312 - 965292 - g 76 -9.8 -3.14522 | overlap 965274 TCAACGGATATTGAA CCAGCTTT AGCTG AAAGCTGG GAAATTAGCGATGAT TERM 1429 965927 - 965899 - g 83 -7.5 -4.68645 | overlap 965900 965903 965916 965917 TAGCCAAAATGAAAA CCGATCCAAAAGT ACA ACTTTTGGAACAA AAAGGTTTGAACGTA TERM 1430 965926 - 965900 - g 74 -8.8 -3.40102 | overlap 965899 965903 965916 965917 AGCCAAAATGAAAAC CGATCCAAAAGT ACA ACTTTTGGAACA AAAAGGTTTGAACGT TERM 1431 965923 - 965903 - g 78 -11.3 -2.84272 | overlap 965900 965899 965916 965917 CAAAATGAAAACCGA TCCAAAAGT ACA ACTTTTGGA ACAAAAAGGTTTGAA hbpA 965028 - 966677 + | heme-binding protein A TERM 1432 966702 - 966719 + F 100 -9.9 -5.38054 | ATTTACTTATTTTAA GCCCTTA TTTA TAAGGGC TTTTTATTTATCAAG TERM 1433 966778 - 966792 + F 73 -7.2 -4.05747 | overlap 966773 ACTTTAACTTGAGTA TAATGC TCT GCATTA TTTCTATCGGATATG TERM 1434 966838 - 966828 - f 72 -2.6 -5.34365 | GTAGAATAATAAAAA TTAA TTG TTAA TATAAGGAACAAAAA NTHI1022 966853 - 967614 + | putative heme iron utilization protein TERM 1435 967665 - 967638 - T 78 -7 -4.2772 | opp_overlap 967638 CTTAATGAAGATAAA GGGTTGAGTGTA AATT TATACTCACCCC TTTTGTTTACGATAA TERM 1436 967638 - 967665 + T 100 -9.2 -4.88918 | opp_overlap 967638 CTTAATGAAGATAAA GGGTTGAGTGTA AATT TATACTCACCCC TTTTGTTTACGATAA TERM 1437 967689 - 967702 + T 73 -3.9 -5.20328 | ACGATAAGTTCGAGT GAAAT TGAA ATTTC TTTATTTTTTTACCG NTHI1023 968098 - 967751 - | hypothetical protein polA 970905 - 968113 - | DNA polymerase I NTHI1025 971054 - 971356 + | hypothetical protein TERM 1438 972056 - 972067 + G 70 -5.8 -4.25104 | GGATATTTTATTTAC GCCA TTGG TGGC TTTTGATAAAAAAGG NTHI1027 971679 - 972242 + | 5-formyltetrahydrofolate cyclo-ligase clpB 972370 - 974940 + | ClpB TERM 1439 974948 - 974977 + T 91 -12.3 -3.31144 | opp_overlap 974953, overlap 974953 GACAATAGGTATTAA AAAAAGTGCGGTA AATT TACCGCACTTTTC TTATGAACCTAAACG TERM 1440 974972 - 974953 - T 100 -12.2 -5.53991 | opp_overlap 974953 974948 TAGGTATTAAAAAAA GTGCGGTA AATT TACCGCAC TTTTCTTATGAACCT TERM 1441 974953 - 974972 + T 100 -12.2 -4.77567 | opp_overlap 974953, overlap 974948 TAGGTATTAAAAAAA GTGCGGTA AATT TACCGCAC TTTTCTTATGAACCT NTHI1029 975718 - 974978 - | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 1442 975739 - 975753 + r 74 -5.8 -4.62069 | TCTCTTTTTCTTATT TGAATT TTT AATTCA TTTTTACAATAGGAA TERM 1443 975790 - 975809 + r 73 -3.6 -5.04249 | TATTTTCGTTTTCTA GATGCTTT CTTC AAAACATC TTTCTTTTTTACCGC vacB 978122 - 975774 - | ribonuclease R NTHI1031 979021 - 978314 - | hypothetical protein TERM 1444 978871 - 978885 + g 70 -7.8 -3.68366 | overlap 978867 AAGAAAAATCGTTTG CTGCAC CAA GTGCGG TTAATTTTAGCGTGA pdxH 979214 - 979846 + | pyridoxamine 5'-phosphate oxidase TERM 1445 979862 - 979899 + T 89 -7.1 -5.35222 | opp_overlap 979863, overlap 979863 979866 TAAATTGAGCATAAA ATAACCGCACTTTAG TTGTATCC CAAAAGTGCGGTTAA TTTTTTCTAAATTTT TERM 1446 979898 - 979863 - T 100 -10.6 -4.49344 | opp_overlap 979863 979862 979866 AAATTGAGCATAAAA TAACCGCACTTTAG TTGTATCC CAAAAGTGCGGTTA ATTTTTTCTAAATTT TERM 1447 979863 - 979898 + T 87 -10.6 -3.78693 | opp_overlap 979863, overlap 979862 979866 AAATTGAGCATAAAA TAACCGCACTTTAG TTGTATCC CAAAAGTGCGGTTA ATTTTTTCTAAATTT TERM 1448 979866 - 979895 + T 76 -7.9 -3.99236 | opp_overlap 979863, overlap 979863 979862 TTGAGCATAAAATAA CCGCACTTTAG TTGTATCC CAAAAGTGCGG TTAATTTTTTCTAAA typA 981783 - 979933 - | GTP-binding protein TypA/ BipA TERM 1449 981466 - 981437 - G 79 -9.4 -3.72576 | gap 1, opp_overlap 981419 981418, overlap 981438 TTTTGTGTCACGAAA CGCGTTTG-TGGC ATTGG GCCATCAAACGCA TCAACAACTAATAGA TERM 1450 981465 - 981438 - G 76 -10.7 -2.83403 | gap 1, opp_overlap 981419 981418, overlap 981437 TTTGTGTCACGAAAC GCGTTTG-TGGC ATTGG GCCATCAAACGC ATCAACAACTAATAG TERM 1451 981856 - 981839 - R 79 -4.1 -5.26316 | opp_overlap 981839 981855, overlap 981855 TGATTTTATAAAAAA GGTGC AATTTACA GCACC TAATTATAGGTTGTT lic3A2 982890 - 981910 - | CMP-neu5Ac--lipooligosaccharide alpha 2-3 sialyltransferase TERM 1452 983572 - 983554 - g 77 -8.2 -3.93177 | AAAAAATATGAAGAA GGCAATAA TGC TTATCGCC CATTAAAAAAAGGCG glnA 983047 - 984459 + | glutamine synthetase TERM 1453 984481 - 984511 + F 84 -12 -2.8382 | opp_overlap 984486, overlap 984486 984508 TGACGTAATCATTTT TAAAAGTGCGGTAG AAT TTACCGCACTTTTC GTTTGAAATTGTTTA TERM 1454 984506 - 984486 - f 100 -11.2 -4.12902 | opp_overlap 984486 984481 TAATCATTTTTAAAA GTGCGGTA GAATT TACCGCAC TTTTCGTTTGAAATT TERM 1455 984486 - 984506 + F 100 -11.9 -4.564 | opp_overlap 984486, overlap 984481 TAATCATTTTTAAAA GTGCGGTAG AAT TTACCGCAC TTTTCGTTTGAAATT TERM 1456 984864 - 984882 + G 70 -8.9 -3.07443 | opp_overlap 984863 ATACAAACCAATATT GTAGGCA CTTAC TGCCTAC TTGAATCAACTCTAG TERM 1457 985410 - 985395 - g 70 -4.8 -4.67942 | CCTAATAAACCAAAA CATATT GATA AATATG AAGATTTAATTTGCT rmlB 984546 - 985589 + | dTDP-glucose 4,6-dehydratase pepB 985666 - 986970 + | aminopeptidase B TERM 1458 987238 - 987219 - g 73 -2.8 -5.26119 | opp_overlap 987219 TCTTGAAAAAGAAAA TGCAGTGA AAGA TTACCGCA CTTTGATTGGTACAA ndk 986977 - 987402 + | nucleoside diphosphate kinase TERM 1459 987436 - 987416 - T 100 -12.7 -4.82154 | opp_overlap 987410 987416 AATTGATAGCAAAAA GCACCTAAA AGT TTTAGGTGC TTTTAAAGTTTTAAT TERM 1460 987416 - 987436 + T 100 -12.7 -4.28651 | opp_overlap 987416, overlap 987410 AATTGATAGCAAAAA GCACCTAAA AGT TTTAGGTGC TTTTAAAGTTTTAAT obgE 988644 - 987472 - | GTPase ObgE TERM 1461 988439 - 988455 + g 71 -6.5 -4.1552 | CGTCCATTCTCTCCA CGCTCTG CGG CAAAGCG TTTATTAAAGCGATA NTHI1041 989592 - 988672 - | putative transport protein TERM 1462 989518 - 989508 - G 72 -5.4 -4.62984 | TCATTACAGACAAAA CTTG TTT CAAG GCAATAGGCAATGAC TERM 1463 989654 - 989623 - R 100 -12.4 -4.11472 | opp_overlap 989628, overlap 989628 GTGAAATTAAAAAGA CAAAACGCCCCACA AAAT TGTAGGGCGTTTCA ATGGAATAGATTTTA TERM 1464 989649 - 989628 - R 100 -12.3 -5.00027 | opp_overlap 989628, overlap 989623 ATTAAAAAGACAAAA CGCCCCACA AAAT TGTAGGGCG TTTCAATGGAATAGA TERM 1465 989628 - 989649 + r 82 -10.1 -3.65902 | opp_overlap 989628 989623 ATTAAAAAGACAAAA CGCCCCACA AAAT TGTAGGGCG TTTCAATGGAATAGA rpmA 989929 - 989672 - | 50S ribosomal protein L27 rplU 990261 - 989950 - | 50S ribosomal protein L21 TERM 1466 990365 - 990349 - H 72 -5.1 -4.67011 | AATTCTACGGAAAAA TCCTACC TAT GGCAAGA ATTTATTTATAATAA ispB 990474 - 991463 + | octaprenyl-diphosphate synthase NTHI1045 991514 - 992251 + | hypothetical protein TERM 1467 992268 - 992300 + T 73 -4.1 -4.93288 | overlap 992287 AAATAGAAAAATAAA GGTGTTGTTTCACAG AAT TTGCTGAACAGCACC TTTTATTTCACTATT NTHI1046 993681 - 992311 - | putative Na+/alanine symporter TERM 1468 992340 - 992367 + g 70 -3 -5.10665 | gap 1, opp_overlap 992342, overlap 992329 992346 CATCTTGATCATAAT GATTAATTTTTAA ACG TTGAAAA-TAATC TTTTGTTTCTTCAAT arcA 994791 - 994081 - | two-component response regulator dipZ 994983 - 996722 + | thiol:disulfide interchange protein precursor NTHI1049 996839 - 997243 + | hypothetical protein TERM 1469 997279 - 997296 + F 100 -11.3 -5.28176 | TTTATCCTTATTTTT GCCCACA TTTA TGTGGGC TTTTTTATGCCTGAA purH 997432 - 999030 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 1470 999071 - 999040 - f 83 -11 -3.10409 | gap 1, overlap 999031 999043 CATTAATTTATCTAA CTA-TCCCCCTCTTT ACA AAAGAGGGGGAATTG CAGGTAAAAAATAGC TERM 1471 999067 - 999043 - f 100 -17.3 -2.76189 | overlap 999040 999031 TAATTTATCTAACTA TCCCCCTCTTT ACA AAAGAGGGGGA ATTGCAGGTAAAAAA purD 999126 - 1000415 + | phosphoribosylamine--glycine ligase TERM 1472 1001270 - 1001285 + F 77 -4.7 -5.10497 | GTGCTTTTGGTTACG GGAGA AAAACA TCTCC TTTTTTAGATAGCTT glyA 1002261 - 1003526 + | serine hydroxymethyltransferase TERM 1473 1003553 - 1003578 + F 100 -11.9 -5.24531 | overlap 1003556 TCGTTGATTATATGT TTAGCGGCGAT TAAT ATCGCCGCTTA TTTTTTATGGGAAAT TERM 1474 1003556 - 1003575 + F 100 -13.6 -4.72201 | overlap 1003553 TTGATTATATGTTTA GCGGCGAT TAAT ATCGCCGC TTATTTTTTATGGGA TERM 1475 1004179 - 1004163 - g 73 -6.5 -4.26076 | opp_overlap 1004162 1004163 1004168 GCACTTGCAGCAAAA GGTGCTA GAA TTGCACC AGTTTTATTTACAAC coaE 1003585 - 1004217 + | dephospho-CoA kinase NTHI1056 1004210 - 1004416 + | zinc-binding protein TERM 1476 1004453 - 1004414 - f 95 -12.4 -3.79747 | opp_overlap 1004420, overlap 1004418 1004420 GGATGGAGCATTAAA TAGAGATTAACCGATAGG AAAC CCTATCGGTTAATTTTTA TAAGTGCGGTGCTTT TERM 1477 1004449 - 1004418 - f 91 -13.2 -3.31162 | opp_overlap 1004420, overlap 1004414 1004420 GGAGCATTAAATAGA GATTAACCGATAGG AAAC CCTATCGGTTAATT TTTATAAGTGCGGTG TERM 1478 1004420 - 1004447 + F 100 -15.8 -4.87665 | opp_overlap 1004420 1004418 1004414 AGCATTAAATAGAGA TTAACCGATAGG AAAC CCTATCGGTTAA TTTTTATAAGTGCGG TERM 1479 1004447 - 1004420 - f 100 -15.8 -3.21671 | opp_overlap 1004420, overlap 1004418 1004414 AGCATTAAATAGAGA TTAACCGATAGG AAAC CCTATCGGTTAA TTTTTATAAGTGCGG rhlB 1004525 - 1005781 + | ATP-dependent RNA helicase RhlB TERM 1480 1005820 - 1005839 + F 72 -5 -4.73094 | TTTGATGATGAAAAG TGCGGTTA ATTT TGACTGCA TTTTATATTCCTATT TERM 1481 1005987 - 1006001 + F 71 -8.6 -3.14672 | overlap 1005986 CGTCCATTCATTTTT GAGCAA TTA TTGCTC CTTATTTTACTCAAG TERM 1482 1006486 - 1006518 + G 72 -9.3 -2.85503 | opp_overlap 1006484, overlap 1006485 TAAGTTTGAAAACGG CGATAAATTTAGCCT CTG ATGCAAAATTTATCG ATTTCGATCTTAAGC NTHI1058 1006023 - 1006586 + | transcriptional regulator TERM 1483 1007529 - 1007515 - g 72 -8.6 -3.28712 | GTTGTCGTTCCACAA GTAGCT ATT AGCTAC AATATGTATGGCGAA NTHI1059 1006618 - 1007814 + | putative membrane-fusion protein TERM 1484 1008280 - 1008270 - g 78 -5.4 -5.08824 | TTCCGATCTAAAAAA CTAG ATT CTAG TCAGGTAACTGATTA TERM 1485 1010308 - 1010291 - g 71 -8.5 -3.38812 | TTGGCTTCAACAACA GGCAAAT GATA ATTTGCC ACAAGGATACACTTA NTHI1060 1007814 - 1010912 + | cation/multidrug efflux pump TERM 1486 1011060 - 1011079 + F 86 -8 -4.67011 | ATAATCCACTTATGT TAGTCTTT ATTT AAAGACTA TTTTTCAGTAAACTT NTHI1061 1011447 - 1011917 + | cell division protein emrB 1013462 - 1011930 - | multidrug resistance protein TERM 1487 1012959 - 1012941 - G 72 -2.4 -5.30686 | opp_overlap 1012943, overlap 1012943 AACATTGATAAAAAA GATCCATC CCC AATGGATA TTATCGCTAATCCAT emrA 1014644 - 1013472 - | multidrug resistance protein A folA 1015299 - 1014817 - | dihydrofolate reductase proB 1015401 - 1016507 + | gamma-glutamyl kinase nudH 1016588 - 1017178 + | dinucleoside polyphosphate hydrolase NTHI1069 1017178 - 1017972 + | permease lgt 1017981 - 1018787 + | prolipoprotein diacylglyceryl transferase TERM 1488 1019275 - 1019290 + G 89 -7.6 -5.1523 | GTTGTCTTCGTCCTT GTATGC ACAC GCATAC TTTTTCTCTTGTGGG thyA 1018797 - 1019648 + | thymidylate synthase TERM 1489 1019995 - 1020009 + G 73 -4.2 -4.94243 | TGATTATAAAACTGG CGCGAT TGG ATCACG TTTTCATTTTTTTGA TERM 1490 1020080 - 1020100 + G 76 -5.5 -5.00616 | opp_overlap 1020080 GTATTGGCAGAAGAG TGTAGTCAA AAA TTGAGTACA TTTTTTCAGAAAAGA NTHI1073 1019648 - 1020169 + | hypothetical protein NTHI1074 1020511 - 1020197 - | hypothetical protein NTHI1075 1020582 - 1020893 + | hypothetical protein TERM 1491 1020916 - 1020937 + F 71 -6.7 -4.12599 | opp_overlap 1020916 GTTTTTTGTGAAGAA TATTGCTAT TGAA ATAGCGATA TTTTAAAAAATTATT TERM 1492 1022735 - 1022756 + G 72 -7.3 -3.94823 | gap 1 AGTTGCGCGGTCGTT CTGGGCGTCA AGG TGAC-CCCGG TTCTTCTCGTTTCTA TERM 1493 1023451 - 1023432 - g 71 -9.4 -2.64257 | opp_overlap 1023432 1023431, overlap 1023431 1023430 GTATAAAAAAGAATC TTTCCGTA TGTT TACGGAAA TGTTGGATTCTTTAA TERM 1494 1023432 - 1023451 + G 75 -9.4 -3.22938 | opp_overlap 1023431 1023430 1023432, overlap 1023431 GTATAAAAAAGAATC TTTCCGTA TGTT TACGGAAA TGTTGGATTCTTTAA TERM 1495 1023624 - 1023612 - g 70 -6.3 -4.34267 | opp_overlap 1023611, overlap 1023620 TCAGACAACTCAAAA TTCAG AGA CTGAA GATTATTCAGATCGT secA 1021018 - 1023723 + | preprotein translocase subunit SecA TERM 1496 1023757 - 1023736 - f 85 -8.7 -4.11412 | opp_overlap 1023736 TAATGAACAATCAAA GTGCGGTGA TTTT TTACCGCAC TTTTTTCATACCTCT TERM 1497 1023736 - 1023757 + F 100 -10.9 -5.17353 | opp_overlap 1023736 TAATGAACAATCAAA GTGCGGTGA TTTT TTACCGCAC TTTTTTCATACCTCT mutT 1023788 - 1024198 + | mutator protein MutT TERM 1498 1025397 - 1025411 + G 79 -8.6 -3.99347 | opp_overlap 1025390 1025394 AAGAACAAGCGACAT TCACTG CTG CAGTGA TTATTTCGATGCTTT TERM 1499 1026061 - 1026047 - g 80 -2.8 -5.66989 | overlap 1026049 GAAATAGTAAAAAAA TATTGG ACA CCAAGA CCATTTATTAAACCG kefB 1024307 - 1026163 + | glutathione-regulated potassium-efflux system protein TERM 1500 1026220 - 1026243 + F 77 -3.2 -5.45802 | GTTTAAGTATTTACT TTTGAGTGAT TTAA ATCACGTAAA TTTTTATTTTAAGGC NTHI1079 1026264 - 1027028 + | hypothetical protein TERM 1501 1027077 - 1027099 + F 89 -7.1 -5.30155 | overlap 1027061 GTATAAATCGCCCCG CTGTTTTTG CCTTT CAAAAGCAG TTTTTTAATTACTAA rpsB 1027206 - 1027928 + | 30S ribosomal protein S2 TERM 1502 1027979 - 1028005 + F 100 -12.4 -4.9725 | opp_overlap 1027976, overlap 1027981 CAAGCGATTAATTGG CATAGGGGCTAA AAT TTAGCCCCTATA TTTTTATCTAAAAGT TERM 1503 1027981 - 1028003 + F 100 -15 -4.11141 | opp_overlap 1027976, overlap 1027979 AGCGATTAATTGGCA TAGGGGCTAA AAT TTAGCCCCTA TATTTTTATCTAAAA tsf 1028062 - 1028913 + | elongation factor Ts TERM 1504 1028939 - 1028962 + T 100 -14 -4.77775 | opp_overlap 1028942 ATAACGATATGTTAA TAAGCCCAAC TTAA GTTGGGCTTA TTTGTTTTATAGGAT TERM 1505 1028959 - 1028942 - T 90 -11.3 -3.67112 | opp_overlap 1028939 ACGATATGTTAATAA GCCCAAC TTAA GTTGGGC TTATTTGTTTTATAG TERM 1506 1029074 - 1029027 - T 100 -16 -4.26076 | opp_overlap 1029034, overlap 1029034 TTACGTTTAGTAAAA TAAAAAATCCACACTTTAATAG TAAA CTTTTAAAGTGTGGATTTTGTA ATAAAACCTCAGAAG TERM 1507 1029034 - 1029067 + T 100 -14.1 -4.46212 | opp_overlap 1029027 1029034 TAGTAAAATAAAAAA TCCACACTTTAATAG TAAA CTTTTAAAGTGTGGA TTTTGTAATAAAACC TERM 1508 1029067 - 1029034 - T 100 -14.1 -5.83211 | opp_overlap 1029034, overlap 1029027 TAGTAAAATAAAAAA TCCACACTTTAATAG TAAA CTTTTAAAGTGTGGA TTTTGTAATAAAACC lpxD 1030118 - 1029093 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 1509 1030036 - 1030091 + g 75 -8.5 -3.7941 | gap 2, opp_overlap 1030046 1030049 1030051, overlap 1030051 1030082 1030087 1030088 TCGAGAGGCGCGATA TTCTCAACAACAACATCGGCGTTACCG CGAA CGGTAGCGCCGAT-TTGA-GTTGCCAA TTCTTGTAAAGAATA TERM 1510 1030082 - 1030046 - G 100 -14.6 -3.64487 | gap 1, opp_overlap 1030036 1030051, overlap 1030049 1030051 CGATATTCTCAACAA CAACATCGGCGTTACCG CGAA CGGTAGCGCCGAT-TTG AGTTGCCAATTCTTG TERM 1511 1030080 - 1030049 - G 100 -13 -3.95324 | opp_overlap 1030036 1030051, overlap 1030046 1030051 TATTCTCAACAACAA CATCGGCGTTACCG CGAA CGGTAGCGCCGATT TGAGTTGCCAATTCT TERM 1512 1030051 - 1030078 + g 100 -17.8 -3.75897 | opp_overlap 1030049 1030046 1030051, overlap 1030036 TTCTCAACAACAACA TCGGCGTTACCG CGAA CGGTAGCGCCGA TTTGAGTTGCCAATT TERM 1513 1030078 - 1030051 - G 100 -15.6 -3.56318 | opp_overlap 1030051 1030036, overlap 1030049 1030046 TTCTCAACAACAACA TCGGCGTTACCG CGAA CGGTAGCGCCGA TTTGAGTTGCCAATT omp26 1030724 - 1030131 - | Outer membrane protein 26 TERM 1514 1030793 - 1030761 - R 71 -8.5 -3.0263 | opp_overlap 1030761 1030758 1030762 1030763 ATGATGGGTTTAATA TTTTCTCTGCCCAAT TAA ATTAGGCAGAGAACG TTGTTTTTGAGTTCT TERM 1515 1030761 - 1030793 + r 89 -8.5 -4.48792 | opp_overlap 1030761, overlap 1030758 1030762 1030763 ATGATGGGTTTAATA TTTTCTCTGCCCAAT TAA ATTAGGCAGAGAACG TTGTTTTTGAGTTCT TERM 1516 1030762 - 1030792 + r 79 -9.8 -3.27648 | opp_overlap 1030761, overlap 1030761 1030758 1030763 TGATGGGTTTAATAT TTTCTCTGCCCAAT TAA ATTAGGCAGAGAAC GTTGTTTTTGAGTTC TERM 1517 1030763 - 1030791 + r 87 -13.3 -2.55505 | opp_overlap 1030761, overlap 1030762 1030761 1030758 GATGGGTTTAATATT TTCTCTGCCCAAT TAA ATTAGGCAGAGAA CGTTGTTTTTGAGTT NTHI1084 1033234 - 1030832 - | protective surface antigen D15 TERM 1518 1032477 - 1032487 + g 79 -4 -5.45813 | TCATTTACATCAATG GTTA CAT TAAC TTTTGTTTTTTCATC NTHI1085 1034585 - 1033254 - | zinc metalloprotease cdsA 1035461 - 1034595 - | phosphatidate cytidylyltransferase uppS 1036198 - 1035479 - | undecaprenyl pyrophosphate synthetase TERM 1519 1037319 - 1037307 - g 74 -5.5 -4.8143 | overlap 1037308 CCAAGAAGCGAAAAA CGCCA AAG TGGCA GAAGCTGATCTTGCG TERM 1520 1037866 - 1037841 - g 70 -2.6 -5.02074 | GGATGGCGTAAAAAA CCCAATTAAA GCAGAT CCTAACTGGG CAAAAACAACCCTTA leuS 1036447 - 1039032 + | leucyl-tRNA synthetase TERM 1521 1039039 - 1039067 + F 95 -8.9 -5.29782 | opp_overlap 1039039, overlap 1039040 AAACCATAATACATA GGGTGTGTGGATT TAA AATTCACGCACCA TTTTTTATAGGTATG TERM 1522 1039040 - 1039066 + F 95 -12.4 -3.76785 | opp_overlap 1039039, overlap 1039039 AACCATAATACATAG GGTGTGTGGATT TAA AATTCACGCACC ATTTTTTATAGGTAT NTHI1091 1039082 - 1039630 + | lipoprotein TERM 1523 1039646 - 1039623 - f 77 -3.3 -5.43974 | gap 1 AAAATCAAATAAAAA GGAAATAATG AACCG CATT-TTTCC AGAGCAACTAAATCA TERM 1524 1039834 - 1039848 + G 70 -2.8 -5.14563 | CTTATAGAATCTTGT CAATCT ATA GGGTTG TTTTTTAGTAAACAA holA 1039630 - 1040664 + | DNA polymerase III subunit delta TERM 1525 1040892 - 1040858 - T 89 -8.7 -4.42788 | opp_overlap 1040861, overlap 1040861 TTGAAGTCTATAAAA GAAGGGATGATTGAC GAAAA ATCAACCATCCCTTT TTACATTATTGAAGC TERM 1526 1040889 - 1040861 - T 100 -10.4 -4.32669 | opp_overlap 1040861, overlap 1040858 AAGTCTATAAAAGAA GGGATGATTGAC GAAAA ATCAACCATCCC TTTTTACATTATTGA TERM 1527 1040861 - 1040889 + T 83 -7.5 -4.8143 | opp_overlap 1040858 1040861 AAGTCTATAAAAGAA GGGATGATTGA CGAAAAA TCAACCATCCC TTTTTACATTATTGA glyS 1043066 - 1040898 - | glycyl-tRNA synthetase subunit beta TERM 1528 1042091 - 1042103 + g 74 -4.8 -4.90013 | opp_overlap 1042091 CCGCATCGGTTAAAC GTGG ACGAA CCAC TTTTTCGTTCCCTTC TERM 1529 1042507 - 1042497 - G 73 -8.2 -3.61398 | TTTCTCGCCTAAGAA GCGG TGA CCGC GAATGGTGCGAGCAC TERM 1530 1042686 - 1042697 + g 72 -5.8 -4.38116 | GTTAAGTAAGTTTTT GGTC GGCT GACC TTTAATTTTTGTACG TERM 1531 1042946 - 1042926 - G 74 -9.1 -3.53091 | overlap 1042927 ACGCGGTGCCGCAAA CCATTCGAT TTT ATCGAATGA TAAACCTGCTTGATT TERM 1532 1042945 - 1042927 - G 76 -10.4 -2.71712 | overlap 1042926 CGCGGTGCCGCAAAC CATTCGAT TTT ATCGAATG ATAAACCTGCTTGAT NTHI1094 1043528 - 1043112 - | hypothetical protein TERM 1533 1043617 - 1043650 + r 100 -20.5 -3.1505 | GTTTTCTTCGTTTAA CTTCTGCCACAAACG CAAG CGTTTGTGGCAGAGG TTAATCCAACCTCAT NTHI1095 1044033 - 1043668 - | hypothetical protein TERM 1534 1043808 - 1043820 + g 74 -7.7 -3.99592 | GCAATGCATCTTTTT CCTGA TAA TCAGG TTTATAGTGCTGACT NTHI1097 1044323 - 1044063 - | glutaredoxin-related protein TERM 1535 1044338 - 1044359 + r 95 -8.7 -5.16572 | opp_overlap 1044338 TTTTGCTCTCCTAAA GTGCGGTCA AATT TCACCGCAC TTTTTTGAATTACCT TERM 1536 1044359 - 1044338 - R 77 -8.7 -3.53012 | opp_overlap 1044338 TTTTGCTCTCCTAAA GTGCGGTCA AATT TCACCGCAC TTTTTTGAATTACCT glyQ 1045290 - 1044382 - | glycyl-tRNA synthetase subunit alpha TERM 1537 1044937 - 1044959 + g 73 -9.2 -3.05384 | overlap 1044939 TTCCCAGTTATCTTC CACGAAACGG ATG TCGTTTTGTG TTGGATCGAAACCGA TERM 1538 1045199 - 1045218 + g 79 -10 -3.51708 | opp_overlap 1045199, overlap 1045195 ACTTCCATATCAAAA GGTTGCAC AATG GTGCAGCC TTGGTTTGCCCAATA TERM 1539 1045218 - 1045199 - G 79 -7.8 -4.3467 | opp_overlap 1045199 1045195 ACTTCCATATCAAAA GGTTGCAC AATG GTGCAGCC TTGGTTTGCCCAATA TERM 1540 1045649 - 1045636 - g 75 -6.7 -4.48987 | opp_overlap 1045648 TGCTGATAACCAAAA CAGCT TAAC AGCTG GTCCGCGTGGTCCAT hktE 1045553 - 1047079 + | catalase TERM 1541 1047123 - 1047168 + T 87 -6.4 -5.47218 | gap 2, opp_overlap 1047123 AATAGTAGTAATGAA TCTGCACCC-AA-AAGTTAGGC TAAG GTTTAACTGATTAGGGTGCAGA TTTTTTTCAATGAAA TERM 1542 1047232 - 1047207 - T 81 -9.9 -3.3517 | opp_overlap 1047205, overlap 1047205 1047208 ATTCATTACATAATA CTTGAACGATT TTGT AATCGTTCAAA AATTTGAATGTAAAA TERM 1543 1047231 - 1047208 - T 83 -11.2 -2.6062 | opp_overlap 1047205, overlap 1047207 1047205 TTCATTACATAATAC TTGAACGATT TTGT AATCGTTCAA AAATTTGAATGTAAA NTHI1100 1048492 - 1047311 - | hypothetical protein NTHI1101 1049074 - 1048493 - | hypothetical protein TERM 1544 1048912 - 1048922 + g 71 -4 -4.99035 | overlap 1048907 TTTCAGTTTTCTGAG TACT TTC AGTA TTTTTATCTGCCTCA NTHI1102 1049539 - 1049087 - | hypothetical protein TERM 1545 1049563 - 1049537 - G 100 -15.3 -5.05601 | opp_overlap 1049535 1049534 TATTAGATATAAAAA CACCGCACTTT TATAC AAAGTGCGGTG AGATTTTACAGTAAA eno 1050900 - 1049590 - | phosphopyruvate hydratase NTHI1104 1052226 - 1051021 - | hypothetical protein TERM 1546 1051711 - 1051699 - G 79 -9.1 -4.00526 | AATTTGATAACCAAA TGGCG TTG CGCCA AGCCCAGGCATAGAA nrfF 1053365 - 1052223 - | formate-dependent nitrite reductase complex nrfFG subunit dsbE2 1053892 - 1053362 - | thiol:disulfide interchange protein DsbE TERM 1547 1053387 - 1053411 + g 70 -5.1 -4.56367 | overlap 1053388 TTCAATGCTTCAATT TTTGGCAAA AATACCG TTTGCCAAG TTTCTTTATCCAATA nrfE 1055799 - 1053892 - | cytochrome c-type biogenesis protein NrfE TERM 1548 1054914 - 1054891 - G 72 -8 -3.76952 | overlap 1054885 GTTATCCAATGCAAA GGCGTGCACA GAAG TGAGCGCGCC AGAACGAACAATAAA TERM 1549 1055892 - 1055873 - R 100 -10.8 -5.17786 | opp_overlap 1055873 TAATAAAATTAAAAA TAGCACCT TGAT AGGTGCTA TTGTGCTTATAAAAA TERM 1550 1055873 - 1055892 + r 89 -10.8 -3.56325 | opp_overlap 1055873 TAATAAAATTAAAAA TAGCACCT TGAT AGGTGCTA TTGTGCTTATAAAAA suhB 1056720 - 1055908 - | inositol-1-monophosphatase TERM 1551 1056675 - 1056701 + g 77 -9.4 -3.4149 | opp_overlap 1056674 1056671, overlap 1056672 1056676 TAGCAATCACATTAC CCGCTTTTCGTG CCG CACGAATAGCGA TATTTAACATTGGAT TERM 1552 1056676 - 1056700 + g 89 -12.9 -2.64412 | opp_overlap 1056674 1056671, overlap 1056675 1056672 AGCAATCACATTACC CGCTTTTCGTG CCG CACGAATAGCG ATATTTAACATTGGA TERM 1553 1056853 - 1056832 - H 90 -8.1 -4.84761 | overlap 1056833 AGATTTTCAGAAAAA CTTTGCGAT ATAG ATCGCAAAA ATCACATCAAGTGAT TERM 1554 1056852 - 1056833 - H 79 -9.4 -3.50133 | overlap 1056832 GATTTTCAGAAAAAC TTTGCGAT ATAG ATCGCAAA AATCACATCAAGTGA TERM 1555 1056969 - 1056983 + G 72 -8.6 -3.27674 | opp_overlap 1056969, overlap 1056968 TTGGATTAGCAATCA TCAGCA TTG TGCTGA GTTTTGTCGTGCCAT NTHI1109 1056920 - 1057432 + | hypothetical protein NTHI1110 1057432 - 1058151 + | hypothetical protein NTHI1111 1058148 - 1058831 + | hypothetical protein NTHI1112 1058836 - 1059111 + | hypothetical protein TERM 1556 1059209 - 1059199 - g 83 -4 -5.61881 | opp_overlap 1059199 CTTGAAAAACAAAAA GAAA TTC TTTC TTCTTTATTCAAATC TERM 1557 1059459 - 1059476 + G 73 -2.8 -5.22039 | ACGCTTAATCCCGAC TTTTCT CGAGAA AGAAAA TTTTTTGCCTTTACG TERM 1558 1061305 - 1061290 - g 77 -6.1 -4.78107 | TATCATTATCAAAAA GGCGA CCGTGT TCGCC GTGATGATGATCGTT recC 1059157 - 1062522 + | exodeoxyribonuclease V gamma chain NTHI1114 1062577 - 1063026 + | transcriptional regulator NrdR TERM 1559 1063723 - 1063707 - g 84 -4.3 -5.53436 | opp_overlap 1063710 1063714, overlap 1063710 1063711 ACAGAATATAAAAAA GAATGGC TTC GCCAGCC TGTGCGAGTCATTTT TERM 1560 1063720 - 1063710 - g 79 -6.8 -4.80737 | opp_overlap 1063710 1063714, overlap 1063707 1063711 GAATATAAAAAAGAA TGGC TTC GCCA GCCTGTGCGAGTCAT TERM 1561 1063931 - 1063919 - g 70 -7.7 -3.67925 | AAAACGACAAATCAA TACCC TTT GGGTA GAAGCTGGAGCAAAT ribD 1063029 - 1064147 + | riboflavin biosynthesis protein RibD degS 1064148 - 1065170 + | protease DegS TERM 1562 1065168 - 1065201 + T 79 -9 -3.87925 | opp_overlap 1065168 1065174 1065176, overlap 1065174 GAATTTCCAGTAAAT TAAAAATAGCGGTC TATTTT GACCGCTGTTTTCA TTATATTTAATACTT TERM 1563 1065174 - 1065195 + T 84 -8 -4.58724 | opp_overlap 1065174 1065168 1065176, overlap 1065168 CCAGTAAATTAAAAA TAGCGGTC TATTTT GACCGCTG TTTTCATTATATTTA TERM 1564 1065195 - 1065174 - T 81 -5.8 -5.01811 | opp_overlap 1065168 1065174, overlap 1065168 1065176 CCAGTAAATTAAAAA TAGCGGTC TATTTT GACCGCTG TTTTCATTATATTTA TERM 1565 1065193 - 1065176 - T 81 -8.4 -4.12375 | opp_overlap 1065174 1065168, overlap 1065174 1065168 AGTAAATTAAAAATA GCGGTC TATTTT GACCGC TGTTTTCATTATATT TERM 1566 1065219 - 1065233 + T 77 -5.8 -4.73677 | ATATTTAATACTTTC TTTTCA ATT TGAAAA TTTATTTGTTCTAAC mutM 1066059 - 1065244 - | formamidopyrimidine-DNA glycosylase TERM 1567 1065699 - 1065687 - G 74 -6.3 -4.68103 | opp_overlap 1065687 CTAACTTTAAGAAAA GATGA AAG TCATC TAGATTCTCCGTCCA TERM 1568 1066236 - 1066265 + r 84 -5.7 -5.50925 | opp_overlap 1066236 1066239 TTTTATTTTACAGAA TAGCCGCCTGTTT TCAG ATACAAGCGGTTA TTTTTTGTGTTAATT ddc 1067826 - 1066291 - | L-2,4-diaminobutyrate decarboxylase NTHI1120 1068244 - 1067846 - | nucleic acid-binding protein NTHI1121 1068477 - 1068244 - | hypothetical protein TERM 1569 1068563 - 1068547 - R 79 -4.4 -5.31275 | gap 1, opp_overlap 1068547 1068546 GTTGAGTAGAAAAAA GGT-GGG ATTT CCCTACC ATTTTGAATTTACAA TERM 1570 1068579 - 1068617 + r 81 -7.4 -4.43477 | opp_overlap 1068579 1068589, overlap 1068573 ATTTTGAATTTACAA GCGGTCAAAATTCGCAAA ACA TTTGCAAAATCAGACCGC TTTTAATTAACTACG TERM 1571 1068617 - 1068579 - R 90 -11.8 -3.42056 | opp_overlap 1068579 1068573, overlap 1068589 ATTTTGAATTTACAA GCGGTCAAAATTCGCAAA ACA TTTGCAAAATCAGACCGC TTTTAATTAACTACG TERM 1572 1068607 - 1068589 - R 71 -6.8 -4.12198 | opp_overlap 1068579 1068573, overlap 1068579 TACAAGCGGTCAAAA TTCGCAAA ACA TTTGCAAA ATCAGACCGCTTTTA dat 1069988 - 1068624 - | diaminobutyrate--2-oxoglutarate aminotransferase TERM 1573 1068764 - 1068782 + g 71 -4.6 -4.7629 | CACGTTCGAGCAAGA GTTTGTTT TTG AAGCAAGC TTTTTGGATTGCTGC TERM 1574 1070296 - 1070313 + r 90 -11.3 -3.63895 | opp_overlap 1070296 AGAACAAATAAAAAA CCCGAGT TTCT ACTCGGG TTTAAAATAATTAAA TERM 1575 1070313 - 1070296 - R 100 -11.3 -5.82036 | opp_overlap 1070296 AGAACAAATAAAAAA CCCGAGT TTCT ACTCGGG TTTAAAATAATTAAA rpmG 1070505 - 1070335 - | 50S ribosomal protein L33 rpmB 1070753 - 1070517 - | 50S ribosomal protein L28 TERM 1576 1070683 - 1070671 - G 70 -4.8 -4.63486 | AGGTTTGGAAGAAAA CGAC GACGT GTCG CATTCATTGCGTGTG radC 1071671 - 1070967 - | DNA repair protein RadC dfp 1071795 - 1072997 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase dut 1073045 - 1073500 + | deoxyuridine 5'-triphosphate nucleotidohydrolase slmA 1073504 - 1074160 + | nucleoid occlusion protein TERM 1577 1074320 - 1074334 + G 74 -8.6 -3.51478 | opp_overlap 1074319 TTACTGACTCAAATT CGCAAT GGA ATTGCG TTGATTGTATGGTCT NTHI1129 1074182 - 1074433 + | hypothetical protein crp 1074418 - 1075092 + | cAMP-regulatory protein TERM 1578 1075122 - 1075144 + T 85 -6.3 -5.39681 | opp_overlap 1075117 TTATTCAAAATAAAA CCATCCGAA ATTAA TTTGGGTGG TTTTTGTTTAATTGT rumB 1076635 - 1075457 - | 23S rRNA methyluridine methyltransferase TERM 1579 1075831 - 1075843 + g 72 -4.8 -4.72272 | opp_overlap 1075831, overlap 1075818 TTCCTGTTAATTTAA TGGG TTTTC CCCA TTTTTCCTGCAACGC nagZ 1077683 - 1076628 - | beta-hexosaminidase TERM 1580 1076872 - 1076882 + g 71 -3.2 -5.15634 | AAAAGATCACAACCT GCAT TCA GTGC TTTTTTGCTACGCTC NTHI1133 1078037 - 1077687 - | periplasmic lipoprotein NTHI1134 1078429 - 1078037 - | HIT-like protein ileS 1081329 - 1078504 - | isoleucyl-tRNA synthetase TERM 1581 1080203 - 1080183 - G 71 -8.3 -3.40522 | opp_overlap 1080183 1080182 ATTTTTCTATCACAA GCGGATTTG CTT CAAATACGC CTTTGCCTGCAAAGA TERM 1582 1080386 - 1080372 - G 73 -7.2 -4.09685 | CGTGATCGCCTAAAA TTACTG GTA CAGTAA AATCATAGAATGGAT ribF 1082296 - 1081358 - | bifunctional riboflavin kinase/FMN adenylyltransferase mviN 1083863 - 1082331 - | putative virulence factor MviN TERM 1583 1084314 - 1084304 - g 72 -5.4 -4.63527 | opp_overlap 1084309 1084310 GCAGCAGGCGAAAAA TCAG CAG CTGA ATCAGCATTCGTTGA rpsT 1084172 - 1084435 + | 30S ribosomal protein S20 TERM 1584 1084487 - 1084460 - T 100 -11.4 -5.05712 | opp_overlap 1084465, overlap 1084465 AGAAAGAATGAAAAA TAAAACCGCACT TTAA AGTGCGGTTTTT TATTGCATCGAATTT TERM 1585 1084482 - 1084465 - T 100 -11.3 -5.34655 | opp_overlap 1084465, overlap 1084460 GAATGAAAAATAAAA CCGCACT TTAA AGTGCGG TTTTTTATTGCATCG TERM 1586 1084465 - 1084482 + T 100 -11.3 -5.4833 | opp_overlap 1084460 1084465 GAATGAAAAATAAAA CCGCACT TTAA AGTGCGG TTTTTTATTGCATCG NTHI1140 1085073 - 1084507 - | hypothetical protein menB 1085219 - 1086076 + | naphthoate synthase menC 1086246 - 1087235 + | O-succinylbenzoate synthase aroQ 1087292 - 1087741 + | 3-dehydroquinate dehydratase TERM 1587 1087832 - 1087870 + F 73 -7.6 -3.88464 | opp_overlap 1087838 AAAAAACAAGTTTAT TCATAACCGCACTTTT TTCGTTT AAAAGTGCGGTTAAAA TTTCAATCTTTTTAG TERM 1588 1087864 - 1087838 - f 87 -11 -3.36803 | opp_overlap 1087832 CAAGTTTATTCATAA CCGCACTTTT TTCGTTT AAAAGTGCGG TTAAAATTTCAATCT accB 1087895 - 1088362 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 1589 1088379 - 1088400 + F 100 -13.7 -3.83502 | TTCCAATATTTTCGT CGGGCGGAC TTTA GTCCGCCTG TTTCATATACAAATA TERM 1590 1089170 - 1089156 - g 80 -7.8 -4.49781 | overlap 1089157 AAAATACTTAGAAAA CCCACG TCA CGTGGA AATTCAAGTGTTATC TERM 1591 1089169 - 1089157 - g 72 -9.1 -3.28242 | overlap 1089156 AAATACTTAGAAAAC CCACG TCA CGTGG AAATTCAAGTGTTAT accC 1088539 - 1089885 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 1592 1089917 - 1089898 - f 90 -10.8 -3.74178 | opp_overlap 1089898 TAATTAAACGTTAAA TGGCTAAC AATG GTTAGCCA TTTCTTATATATGCC TERM 1593 1089898 - 1089917 + F 100 -10.8 -4.42974 | opp_overlap 1089898 TAATTAAACGTTAAA TGGCTAAC AATG GTTAGCCA TTTCTTATATATGCC NTHI1146 1090090 - 1090347 + | hypothetical protein panF 1090344 - 1091798 + | sodium/panthothenate symporter TERM 1594 1091815 - 1091848 + F 100 -14.1 -4.27483 | opp_overlap 1091813, overlap 1091810 1091817 CGTCAATCAATATGC TGTCACCTTCTTCTA AACT TAGAGGAAGGTGATA TTTAATTTTCTCACT TERM 1595 1091817 - 1091846 + F 100 -14.5 -3.7278 | opp_overlap 1091813, overlap 1091815 1091810 TCAATCAATATGCTG TCACCTTCTTCTA AACT TAGAGGAAGGTGA TATTTAATTTTCTCA NTHI1148 1091919 - 1092791 + | hypothetical protein prmA 1092826 - 1093713 + | ribosomal protein L11 methyltransferase TERM 1596 1094186 - 1094198 + G 70 -7.7 -3.66844 | opp_overlap 1094185 1094177 1094171 GGTAAATCGCAAACT TGCAG GCT CTGCA TTGTTGCAATATCCC dusB 1093860 - 1094840 + | tRNA-dihydrouridine synthase B TERM 1597 1094847 - 1094835 - g 76 -2.7 -5.38054 | TTGGATAAAGAAAAA TGTTA GAA CAACA ACGTAATCCTGCCGA fis 1094834 - 1095133 + | DNA-binding protein Fis TERM 1598 1095189 - 1095219 + T 100 -10.6 -4.4634 | opp_overlap 1095189 ATTCTATTTTAAAAA TTAGCCCCAAGT AATTTGA ATTTGGGGCTAA TTTATTATTACAATT TERM 1599 1095219 - 1095189 - T 84 -8.4 -4.62336 | opp_overlap 1095189 ATTCTATTTTAAAAA TTAGCCCCAAGT AATTTGA ATTTGGGGCTAA TTTATTATTACAATT smpB 1095719 - 1095234 - | SsrA-binding protein TERM 1600 1095737 - 1095747 + r 74 -6.8 -4.4195 | TTTTATCCCTTATTT TGCC TGA GGCA TTTTATCGGATCTCT TERM 1601 1095881 - 1095900 + r 89 -10.8 -3.53811 | opp_overlap 1095881 CTTTTTAAGAAAAAA CAGACACA TTGT TGTGTCTG TTTGAGAAAGATAAA TERM 1602 1095900 - 1095881 - R 100 -10.8 -5.4505 | opp_overlap 1095881 CTTTTTAAGAAAAAA CAGACACA TTGT TGTGTCTG TTTGAGAAAGATAAA pfkA 1096923 - 1095958 - | 6-phosphofructokinase TERM 1603 1097041 - 1097060 + r 71 -3 -5.07523 | gap 1 TCACAAAACAGTTGC CATTT-CAA ATT TTGTAAATG TTTTCTTTCTATATC NTHI1155 1097600 - 1097019 - | hypothetical protein NTHI1156 1098444 - 1097593 - | hypothetical protein TERM 1604 1098151 - 1098161 + g 71 -4 -4.91712 | AGGGCGAGAATTGTC TTCA TTG TGAA TTTTTGTCCATTCAG smf 1099543 - 1098422 - | hypothetical protein TERM 1605 1099612 - 1099635 + H 76 -6.8 -4.4831 | opp_overlap 1099610 1099603 1099613, overlap 1099610 1099613 GATTAATTTAAAAGC ATTTTGCGAT GTAG ATCGCAAAAA TTCTTTTTAATGAAT TERM 1606 1099613 - 1099634 + H 83 -10.3 -3.27901 | opp_overlap 1099613 1099610 1099603, overlap 1099612 1099610 ATTAATTTAAAAGCA TTTTGCGAT GTAG ATCGCAAAA ATTCTTTTTAATGAA TERM 1607 1099634 - 1099613 - H 80 -10.3 -3.14307 | opp_overlap 1099612 1099610 1099613, overlap 1099610 1099603 ATTAATTTAAAAGCA TTTTGCGAT GTAG ATCGCAAAA ATTCTTTTTAATGAA TERM 1608 1100007 - 1099986 - H 80 -9.5 -3.67417 | gap 1, opp_overlap 1099986 ATACCCAATTTTAAA CCCGC-ACTT TAT AAGTCGCGGG TTTTTTGTCTAAAAA TERM 1609 1099986 - 1100007 + H 100 -9.5 -5.36441 | gap 1, opp_overlap 1099986 ATACCCAATTTTAAA CCCGC-ACTT TAT AAGTCGCGGG TTTTTTGTCTAAAAA leuA 1100087 - 1101634 + | 2-isopropylmalate synthase TERM 1610 1101668 - 1101635 - f 73 -8.9 -3.31691 | gap 1, opp_overlap 1101631 CATAAACATCACTAA CCCAATCCCCCTCTTT AGT AAAGAGGGGT-TAGGG GAGATTTGGCAGAAG leuB 1101797 - 1102873 + | 3-isopropylmalate dehydrogenase leuC 1103050 - 1104459 + | isopropylmalate isomerase large subunit leuD 1104484 - 1105086 + | isopropylmalate isomerase small subunit TERM 1611 1105143 - 1105169 + T 84 -11.7 -3.01422 | opp_overlap 1105147, overlap 1105147 AATTTCATTCAAAAA TAAAGCCCTGT AATAC ACAGGGCTTTG TCGTTTATAACGCTA TERM 1612 1105147 - 1105165 + T 100 -10.3 -4.17701 | opp_overlap 1105147, overlap 1105143 TCATTCAAAAATAAA GCCCTGT AATAC ACAGGGC TTTGTCGTTTATAAC TERM 1613 1105165 - 1105147 - T 100 -11 -4.89063 | opp_overlap 1105143 1105147 TCATTCAAAAATAAA GCCCTGTA ATA CACAGGGC TTTGTCGTTTATAAC iga1 1110584 - 1105200 - | IgA-specific serine endopeptidase TERM 1614 1106113 - 1106127 + g 86 -10 -4.26589 | ACATCATTTCCCGAT TGCGGA TTC TCCGCA TTTTCAGTATGTAGT TERM 1615 1106509 - 1106489 - G 73 -8.3 -3.63515 | TTTCAGGTGTAACAA CTTCTGTTG AAG CAACAGCAG TGTGGGCTTCAGGCT TERM 1616 1107980 - 1107996 + g 70 -7.3 -3.72765 | TGCCAAATAAGTTAG CTTTGCC TAA GGTAAAG TTTGCACTTTCGGTT TERM 1617 1108450 - 1108437 - G 71 -3.1 -5.10461 | GCCAGTCAATAAAAA GCGAT TTTG ATCAC TTTTGCCACTAAAGG TERM 1618 1109515 - 1109525 + g 83 -4 -5.55769 | TTATAAATATTCCAT TCTT GCC AAGA TTTTTTCTTATACCC TERM 1619 1109651 - 1109663 + g 70 -6.3 -4.24963 | TAGTAAGCGGTTTAC GAGAT AAT ATCTC TTTTGGATCGTTATG recF 1111890 - 1110811 - | recombination protein F TERM 1620 1111713 - 1111729 + g 70 -8.7 -3.10775 | opp_overlap 1111713, overlap 1111712 CGTCGTAAGAAATGA TGCGGTT TGT GACCGCA CTTTTAAATGAACGT dnaN 1112992 - 1111892 - | DNA polymerase III subunit beta dnaA 1114549 - 1113185 - | chromosomal replication initiation protein TERM 1621 1113683 - 1113673 - G 77 -6.8 -4.63218 | opp_overlap 1113673 1113672 CCTTTTTCAATAAAA TCGC TAC GCGA GTTTCAAGATCGGGC tbp1 1117474 - 1114736 - | transferrin-binding protein 1 TERM 1622 1115871 - 1115887 + g 79 -8.7 -4.053 | TTGAAACCATTTCTT CTTGGTG TTT CACCAGG TTTCTCTGAAATACT TERM 1623 1116844 - 1116857 + g 76 -5.3 -5.01042 | TAAAGCCTTTATTTT TGCTT GAAT AAGCA TTTTTAGTTTGAATT tbp2 1119411 - 1117519 - | transferrin-binding protein 2 precursor NTHI1171 1119508 - 1120968 + | hypothetical protein rpmH 1121144 - 1121278 + | 50S ribosomal protein L34 rnpA 1121291 - 1121650 + | ribonuclease P NTHI1174 1121614 - 1121874 + | hypothetical protein TERM 1624 1121895 - 1121910 + G 83 -4 -5.5454 | TCAAGACGTAGCCTA TTAGTG CTTG CACTGA TTTTTATTTCTTTCC yidC 1121874 - 1123499 + | putative inner membrane protein translocase component YidC TERM 1625 1123535 - 1123521 - f 88 -7.1 -4.89966 | opp_overlap 1123521 ACAGGCAAAAAGAAA GGCAC GGAAT GTGCC TTTTCTTTATTTTAC TERM 1626 1123521 - 1123535 + F 89 -7.8 -5.26247 | opp_overlap 1123521 ACAGGCAAAAAGAAA GGCACG GAA TGTGCC TTTTCTTTATTTTAC TERM 1627 1123628 - 1123599 - f 100 -15.9 -3.35992 | opp_overlap 1123603, overlap 1123603 ACCTACCCTAAGCAA TCAACCGTGGGTA AGTA TACCCACGGTTAA TTATAGTAATAATAG TERM 1628 1123603 - 1123624 + F 100 -14.5 -3.48036 | opp_overlap 1123599 1123603 ACCCTAAGCAATCAA CCGTGGGTA AGTA TACCCACGG TTAATTATAGTAATA TERM 1629 1123624 - 1123603 - f 100 -14.5 -3.45634 | opp_overlap 1123603, overlap 1123599 ACCCTAAGCAATCAA CCGTGGGTA AGTA TACCCACGG TTAATTATAGTAATA TERM 1630 1123659 - 1123643 - f 93 -12.3 -3.47383 | overlap 1123641 ATTATAGTAATAATA GTTCCCC TTT GGGGAAC GTCAAGCTCTACCCC TERM 1631 1123717 - 1123696 - f 100 -13.1 -4.00038 | opp_overlap 1123684 1123693 TAGCACTAGGATAAA CCTAGGGTA TACT TACCCTAGG TAGTAGTGTACCTAC TERM 1632 1123771 - 1123742 - f 100 -15.9 -3.35992 | opp_overlap 1123746, overlap 1123746 ACCTACCCTAAGCAA TCAACCGTGGGTA GGTA TACCCACGGTTAA TTATAGTAATAATAG TERM 1633 1123746 - 1123767 + F 100 -14.5 -3.48036 | opp_overlap 1123746 1123742 ACCCTAAGCAATCAA CCGTGGGTA GGTA TACCCACGG TTAATTATAGTAATA TERM 1634 1123767 - 1123746 - f 100 -14.5 -3.45634 | opp_overlap 1123746, overlap 1123742 ACCCTAAGCAATCAA CCGTGGGTA GGTA TACCCACGG TTAATTATAGTAATA TERM 1635 1123803 - 1123784 - f 70 -7.2 -3.79849 | gap 1, overlap 1123786 TAATTATAGTAATAA TAGTTCCCC TTT GGGGAAC-A TCAAGCTCTACCCCA TERM 1636 1123802 - 1123786 - f 93 -12.3 -3.47383 | overlap 1123784 ATTATAGTAATAATA GTTCCCC TTT GGGGAAC ATCAAGCTCTACCCC TERM 1637 1123830 - 1123808 - f 81 -9.8 -3.36273 | opp_overlap 1123828 TTTGGGGAACATCAA GCTCTACCCC AAA GGGGTAGCAC TGGGATAAACCTAGG TERM 1638 1123861 - 1123840 - f 95 -13.1 -3.88291 | opp_overlap 1123828 1123837 TAGCACTGGGATAAA CCTAGGGTA TACT TACCCTAGG TAGTAGTATACCTAC TERM 1639 1123935 - 1123906 - f 81 -10.1 -3.35992 | opp_overlap 1123910, overlap 1123910 ACCTACCCTAAGCAA TCAACTGTGGGTA GGTA TACCCACGGTTAA TTATAGTAATAATAG TERM 1640 1123931 - 1123910 - f 75 -8.7 -3.45634 | opp_overlap 1123910, overlap 1123906 ACCCTAAGCAATCAA CTGTGGGTA GGTA TACCCACGG TTAATTATAGTAATA TERM 1641 1123910 - 1123931 + F 87 -10.9 -3.48036 | opp_overlap 1123910 1123906 ACCCTAAGCAATCAA CTGTGGGTA GGTA TACCCACGG TTAATTATAGTAATA TERM 1642 1123966 - 1123950 - f 93 -12.3 -3.47383 | overlap 1123948 ATTATAGTAATAATA GTTCCCC TCT GGGGAAC GTCAAGCTCTACCCC TERM 1643 1124025 - 1124004 - f 95 -13.1 -3.88291 | opp_overlap 1123992 1124001 TAGCACTGGGATAAA CCTAGGGTA TACT TACCCTAGG TAGTAGTATACCTAC TERM 1644 1124099 - 1124070 - f 93 -12.3 -3.35992 | opp_overlap 1124074, overlap 1124074 ACCTACCCTAAGCAA TCAACCATGGGTA AGTA TACCCACGGTTAA TTATAGTAATAATAG TERM 1645 1124095 - 1124074 - f 87 -10.9 -3.45634 | opp_overlap 1124074, overlap 1124070 ACCCTAAGCAATCAA CCATGGGTA AGTA TACCCACGG TTAATTATAGTAATA TERM 1646 1124074 - 1124095 + F 75 -8.7 -3.48036 | opp_overlap 1124074 1124070 ACCCTAAGCAATCAA CCATGGGTA AGTA TACCCACGG TTAATTATAGTAATA TERM 1647 1124130 - 1124114 - f 93 -12.3 -3.47383 | overlap 1124112 ATTATAGTAATAATA GTTCCCC TTT GGGGAAC GTCAAGCTCTACCCC TERM 1648 1124189 - 1124168 - f 100 -13.1 -4.00038 | opp_overlap 1124156 1124165 1124163 TAGCACTAGGATAAA CCTAGGGTA TACT TACCCTAGG TAGTAGTATACTTAC TERM 1649 1124243 - 1124214 - f 100 -15.9 -3.06915 | opp_overlap 1124218, overlap 1124200 1124218 ACTTACCCTAGGCAA TCAACCGTGGGTA AGTA TACCCACGGTTAA TTATAGTAATAGTAG TERM 1650 1124218 - 1124239 + F 100 -14.5 -3.48036 | opp_overlap 1124200 1124218 1124214 ACCCTAGGCAATCAA CCGTGGGTA AGTA TACCCACGG TTAATTATAGTAATA TERM 1651 1124239 - 1124218 - f 100 -14.5 -3.37522 | opp_overlap 1124218, overlap 1124200 1124214 ACCCTAGGCAATCAA CCGTGGGTA AGTA TACCCACGG TTAATTATAGTAATA TERM 1652 1124274 - 1124258 - f 86 -12.3 -2.79589 | ATTATAGTAATAGTA GTTCCCC TTT GGGGAAC ATCAAGCTCTACCCC TERM 1653 1124302 - 1124280 - f 81 -9.8 -3.36273 | opp_overlap 1124300 TTTGGGGAACATCAA GCTCTACCCC AAA GGGGTAGCAC TGGGATAAACCTAGG TERM 1654 1124333 - 1124312 - f 95 -13.1 -3.88291 | opp_overlap 1124300 1124309 1124305 1124303 1124312 TAGCACTGGGATAAA CCTAGGGTA TACT TACCCTAGG TAATATCATATTTCC TERM 1655 1124312 - 1124333 + F 87 -13.1 -2.7169 | opp_overlap 1124312, overlap 1124300 1124309 1124305 1124303 TAGCACTGGGATAAA CCTAGGGTA TACT TACCCTAGG TAATATCATATTTCC trmE 1124370 - 1125728 + | tRNA modification GTPase TrmE ppiD 1125917 - 1127785 + | peptidyl-prolyl cis-trans isomerase D TERM 1656 1127844 - 1127824 - f 100 -11.9 -4.0896 | opp_overlap 1127824 AAATTTTGCTCAAAA GTGCGGTAA ATT TCACCGCAC TTTTTTACTTTTGTG TERM 1657 1127824 - 1127844 + F 100 -9.7 -5.50313 | opp_overlap 1127824 AAATTTTGCTCAAAA GTGCGGTAA ATT TCACCGCAC TTTTTTACTTTTGTG TERM 1658 1127902 - 1127919 + G 85 -2.8 -5.74288 | AGAAATAATTCATTC TAAAAC AATATG GTTTTA TTTTTTGTTGTTTCT TERM 1659 1129258 - 1129245 - g 84 -2.3 -5.8096 | overlap 1129246 TAGAAAAAATAAAAA CGCCA CAAT CGGCA TTTAATTTTGTTTAT NTHI1180 1127873 - 1129432 + | PE--lipooligosaccharide phosphorylethanolamine transferase lspA 1129502 - 1130017 + | lipoprotein signal peptidase ispH 1130014 - 1130958 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 1660 1130961 - 1130992 + F 95 -8.8 -5.27477 | opp_overlap 1130961 1130959 1130965 AGAAGTTAATTAATA CTAAGGGCTTATCG TCAA TGATAAGTCCTTTG TTTTTTCATTCAAAT NTHI1183 1131127 - 1131474 + | hypothetical protein TERM 1661 1131512 - 1131494 - f 75 -8.8 -3.35867 | opp_overlap 1131495, overlap 1131495 CTAACCTCCAATGAA TGCCCTGT TTC ACAGGGCT TTTTTATTCTTTACA TERM 1662 1131495 - 1131511 + F 100 -12.3 -5.72254 | opp_overlap 1131495 1131494 TAACCTCCAATGAAT GCCCTGT TTC ACAGGGC TTTTTTATTCTTTAC TERM 1663 1131511 - 1131495 - f 86 -12.3 -2.61199 | opp_overlap 1131495, overlap 1131494 TAACCTCCAATGAAT GCCCTGT TTC ACAGGGC TTTTTTATTCTTTAC tbpA 1131721 - 1132719 + | thiamine-binding periplasmic protein TERM 1664 1132748 - 1132781 + G 85 -11.7 -3.58914 | overlap 1132751 TTATTTCATCATCCA CAACTTCGCCCTCGT CATT ATGCGGGCGGGGTTG TTGTCATTAGTTTCA TERM 1665 1132751 - 1132778 + G 74 -7.6 -3.90843 | overlap 1132748 TTTCATCATCCACAA CTTCGCCCTCGT CATT ATGCGGGCGGGG TTGTTGTCATTAGTT TERM 1666 1132982 - 1133002 + G 70 -7.7 -3.68936 | opp_overlap 1132981 1132982, overlap 1132966 GCATTATTTTATAAG CCATTTTTT GGA AAAAAGTGG TTGTTAAAATTAATG thiP 1132724 - 1134340 + | thiamine transporter membrane protein thiQ 1134318 - 1134971 + | thiamine transport ATP-binding protein TERM 1667 1135729 - 1135715 - g 72 -7.1 -3.95584 | opp_overlap 1135714 TGGGGATGAATGAAA CCCGT AAAGA ACGGG CTGGATTAATCGCGA bioB 1135084 - 1136085 + | biotin synthase TERM 1668 1136166 - 1136202 + T 79 -8.1 -3.92324 | opp_overlap 1136174, overlap 1136171 1136174 AATTTTCAATAGCCA ATAAAAAAGCTCCTTGA ATA TCAAGGAGCTAGTTTAG TTTAATCTTAAAGAA TERM 1669 1136171 - 1136197 + T 81 -8 -4.14345 | opp_overlap 1136174, overlap 1136166 1136174 TCAATAGCCAATAAA AAAGCTCCTTGA ATA TCAAGGAGCTAG TTTAGTTTAATCTTA TERM 1670 1136194 - 1136174 - T 100 -14.1 -5.49234 | opp_overlap 1136174 1136171 1136166 ATAGCCAATAAAAAA GCTCCTTGA ATA TCAAGGAGC TAGTTTAGTTTAATC TERM 1671 1136174 - 1136194 + T 93 -14.1 -3.08002 | opp_overlap 1136174, overlap 1136171 1136166 ATAGCCAATAAAAAA GCTCCTTGA ATA TCAAGGAGC TAGTTTAGTTTAATC tktA 1138207 - 1136210 - | transketolase TERM 1672 1136721 - 1136733 + g 70 -7.7 -3.63968 | opp_overlap 1136713, overlap 1136729 GATTCAACTTGGTCA CATGG ACG CCATG TTTCAAGGTTTGGAA TERM 1673 1137282 - 1137292 + g 71 -4 -4.91109 | TAAGCGGCAAATTTT TCTT CCC AAGA TTTTTCTGCTGCAGC serB 1138588 - 1139532 + | phosphoserine phosphatase TERM 1674 1139619 - 1139635 + G 80 -10.1 -3.70546 | opp_overlap 1139618 1139619, overlap 1139613 GTGGAAAATGCAAAC CGTGTGC TTA GCACGCG TTATGATTTTCGTGG TERM 1675 1139892 - 1139878 - g 74 -5.8 -4.65078 | AGATGGCGAAGAAAA TTACTA AAT TAGTAA AAGATTCTAAAATCA NTHI1194 1139550 - 1140041 + | nucleotide-binding protein corA 1140337 - 1141284 + | magnesium/nickel/cobalt transporter CorA NTHI1196 1141275 - 1141829 + | integral membrane protein TERM 1676 1141884 - 1141911 + T 100 -11.5 -5.43974 | ATTGAAGATTTAGTT GGTAAGAATAG TATTTT CTATTCTTACC TTTTTATTTCGTTTT NTHI1197 1142893 - 1142009 - | hypothetical protein NTHI1198 1143577 - 1143050 - | hypothetical protein TERM 1677 1144150 - 1144162 + G 70 -4.9 -4.56597 | CAAAATTTATCCGCT TTCTT TCA AAGAA TTTTTGCACGCCAAA TERM 1678 1144291 - 1144281 - g 72 -5.4 -4.65263 | AGCCTTTAAAAGAAA CGAT TTT ATCG GGTATTTTTGATTCC NTHI1199 1143707 - 1144909 + | ATPase TERM 1679 1144936 - 1144919 - T 70 -4.1 -4.70626 | opp_overlap 1144935 CAATAAGTCTAAAAA CGTTGAA AATT TTCACCG CACTTTTGTGTTTAA NTHI1201 1146448 - 1145099 - | hypothetical protein TERM 1680 1145858 - 1145888 + g 70 -7 -3.79419 | opp_overlap 1145886 ATCACTAATATTGAC TCCTTTAGGTGA AGAAGAA TCACCTAAAGCA TATTTTATACAACGA TERM 1681 1146239 - 1146197 - G 74 -7.9 -4.0274 | TGCACCATCAAATAA TCCTGAGCTAATTGC AATGCACATACGA GCAATAAGCTCAGGA TTCACATTCTGGACT NTHI1203 1147416 - 1146916 - | ferredoxin NTHI1204 1148027 - 1147416 - | twin-argninine leader-binding protein DmsD TERM 1682 1148132 - 1148108 - R 100 -15.9 -4.58283 | opp_overlap 1148106 1148103 TAACGTTTCTAAAAA TTGAGGCGTAT GCT ATACGCCTCAA CATAATTTAACCACC dmsC 1148978 - 1148139 - | anaerobic dimethyl sulfoxide reductase chain C dmsB 1149597 - 1148980 - | anaerobic dimethyl sulfoxide reductase chain B dmsA 1152028 - 1149608 - | anaerobic dimethyl sulfoxide reductase chain A precursor TERM 1683 1149706 - 1149718 + g 75 -7.7 -4.0942 | TAATGCAACCTGAAT GATCG ATA CGATC TTTATCTGGTGCATA TERM 1684 1152601 - 1152584 - g 71 -4.1 -4.92363 | AAAGATGCACAAAAA CGTGATT TAAA AGTCACG ATGGTCATTGAAACA NTHI1208 1152281 - 1153390 + | hypothetical protein NTHI1209 1153434 - 1153727 + | mercuric transporter MerT NTHI1211 1153736 - 1154014 + | copper chaperone MerP-like protein TERM 1685 1154032 - 1154063 + T 100 -14.6 -3.77489 | opp_overlap 1154037, overlap 1154037 GCTAAATATCTAGCA AAAAAGTGCGGTGA AAAT TCACCGCACTTTTC TTTAGCTATTAAATT TERM 1686 1154058 - 1154037 - T 100 -14.5 -5.17353 | opp_overlap 1154032 1154037 ATATCTAGCAAAAAA GTGCGGTGA AAAT TCACCGCAC TTTTCTTTAGCTATT TERM 1687 1154037 - 1154058 + T 100 -14.5 -4.93288 | opp_overlap 1154037, overlap 1154032 ATATCTAGCAAAAAA GTGCGGTGA AAAT TCACCGCAC TTTTCTTTAGCTATT NTHI1212 1155983 - 1154139 - | ABC transporter ATP-binding protein TERM 1688 1156025 - 1156000 - R 93 -9.1 -4.56597 | opp_overlap 1156005, overlap 1155985 1155986 1156005 TCTTTTCCTTAAAAA GAAAAGGCAAC GCGG GTTGCCTTTTA GAAGTGCATATTATT TERM 1689 1156005 - 1156020 + r 85 -9 -4.11692 | opp_overlap 1156005 1156000 TCCTTAAAAAGAAAA GGCAAC GCGG GTTGCC TTTTAGAAGTGCATA TERM 1690 1156020 - 1156005 - R 95 -9 -5.26119 | opp_overlap 1156005, overlap 1156000 TCCTTAAAAAGAAAA GGCAAC GCGG GTTGCC TTTTAGAAGTGCATA NTHI1213 1156958 - 1156062 - | putative transcriptional regulator NTHI1214 1157070 - 1157411 + | hypothetical protein TERM 1691 1157448 - 1157475 + T 100 -11.4 -4.65078 | opp_overlap 1157451, overlap 1157451 TAAGTTGATTAAGAG AAAGGGAGCATT TTTT AATGCTCCCTTG TTTTGTTAAGGCTGT TERM 1692 1157472 - 1157451 - T 100 -13.1 -4.23674 | opp_overlap 1157448 1157451 GTTGATTAAGAGAAA GGGAGCATT TTTT AATGCTCCC TTGTTTTGTTAAGGC TERM 1693 1157451 - 1157472 + T 100 -13.1 -4.43307 | opp_overlap 1157451, overlap 1157448 GTTGATTAAGAGAAA GGGAGCATT TTTT AATGCTCCC TTGTTTTGTTAAGGC NTHI1215 1158118 - 1157522 - | hypothetical protein res 1160289 - 1158124 - | putative type III restriction-modification system HindVIP enzyme res TERM 1694 1159390 - 1159376 - G 72 -5.6 -4.62669 | opp_overlap 1159374 1159376 CAAGCAAACAATAAA GCGTGT AAC ACTCGC TCTTTCTTACCCAGC TERM 1695 1159550 - 1159564 + g 75 -4.2 -5.10461 | TCCAACAGCACATTT TGGCTA TGA TTGCCA TTTTTATTGAGTAAC TERM 1696 1161030 - 1161044 + r 95 -8.6 -5.02502 | opp_overlap 1161030 1161029 TGTAGTCTTAATAAT TGGCAA ACT TTGCCA TTTTTATCTAATGTA TERM 1697 1162239 - 1162262 + r 74 -3 -5.24531 | opp_overlap 1162240 1162243, overlap 1162240 1162243 CATCATTCCCCAATA ACAACCCGAT AATA GTCGGGTCGG TTTTTTCTACCAAAT TERM 1698 1162261 - 1162240 - R 73 -8 -3.62775 | opp_overlap 1162240 1162239 1162243, overlap 1162243 ATCATTCCCCAATAA CAACCCGA TAATAG TCGGGTCG GTTTTTTCTACCAAA TERM 1699 1162490 - 1162515 + r 71 -3.4 -5.05113 | overlap 1162509 CTCTCTTAACCTGTT TTCTTTGACT CACAGA AGTCAAAAAA TTTTGTTTATGTGCA rnhB 1163189 - 1162596 - | ribonuclease HII TERM 1700 1162987 - 1163000 + g 82 -5.2 -5.41941 | TCAGCTCGACCTAAT GCCC AAGCAA GGGC TTTTTCTTTGATTTC TERM 1701 1163036 - 1163048 + g 70 -2.7 -5.0538 | overlap 1163037 CAAGGGCTAAACGTT TTTTC TCA GAAAG TTTTTTAGAATCAGC TERM 1702 1163138 - 1163128 - G 77 -8.2 -3.91352 | overlap 1163116 ACAGCCCCAACTAAA GGGC CTC GCCC AACTTCATCAACACC lpxB 1164354 - 1163182 - | lipid-A-disaccharide synthase TERM 1703 1164071 - 1164087 + g 70 -3 -5.06816 | gap 1, overlap 1164071 TCAGGCGCATCAATG CC-GATG TAAA CATCAGG TTTTTCTTGCAACAT TERM 1704 1164403 - 1164373 - R 100 -12.7 -5.05782 | overlap 1164376 ATTTATCCTAAAAAA TAACCGCACTTTG GTGTG CAAAGTGCGGTTG AAAATGAAGAAGTTT TERM 1705 1164400 - 1164376 - R 100 -14.4 -4.63089 | overlap 1164373 TATCCTAAAAAATAA CCGCACTTTG GTGTG CAAAGTGCGG TTGAAAATGAAGAAG lpxA 1165209 - 1164421 - | UDP-N-acetylglucosamine acyltransferase fabZ 1165669 - 1165223 - | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase NTHI1224 1167352 - 1165745 - | PE--lipooligosaccharide phosphorylethanolamine transferase pyrH 1167445 - 1168158 + | uridylate kinase nrfD 1169362 - 1168397 - | NrfD, formate-dependent nitrite reductase, membrane component nrfC 1170036 - 1169359 - | NrfC, Fe-S-cluster-containing hydrogenase component 1 nrfB 1170716 - 1170033 - | cytochrome c-type protein NrfB TERM 1706 1170707 - 1170758 + g 91 -9.1 -4.98911 | gap 2, opp_overlap 1170713 1170714 1170716, overlap 1170713 1170713 1170714 1170716 CCTCAAATTTGACCT TGAAAA-T-CACCGCACTTTCCAGT TTGC ACTAAAAAGTGCGGTGCATTTTTCA TTTATTTTTGTGCTG TERM 1707 1170750 - 1170713 - G 100 -14.3 -4.11394 | opp_overlap 1170713 1170713 1170707 1170714 1170716, overlap 1170714 1170716 ATTTGACCTTGAAAA TCACCGCACTTTCCAGT TTGC ACTAAAAAGTGCGGTGC ATTTTTCATTTATTT TERM 1708 1170713 - 1170750 + g 80 -9.9 -3.65442 | opp_overlap 1170713 1170714 1170716, overlap 1170707 1170713 1170714 1170716 ATTTGACCTTGAAAA TCACCGCACTTTCCAGT TTGC ACTAAAAAGTGCGGTGC ATTTTTCATTTATTT TERM 1709 1170713 - 1170751 + g 91 -8.3 -5.1517 | gap 1, opp_overlap 1170713 1170714 1170716, overlap 1170713 1170707 1170714 1170716 ATTTGACCTTGAAAA T-CACCGCACTTTCCAGT TTGC ACTAAAAAGTGCGGTGCA TTTTTCATTTATTTT TERM 1710 1170714 - 1170749 + g 93 -13.4 -2.76825 | opp_overlap 1170713 1170714 1170716, overlap 1170713 1170713 1170707 1170716 TTTGACCTTGAAAAT CACCGCACTTTCCAGT TTGC ACTAAAAAGTGCGGTG CATTTTTCATTTATT TERM 1711 1170749 - 1170714 - G 100 -17.8 -3.06515 | opp_overlap 1170714 1170713 1170713 1170707 1170716, overlap 1170713 1170716 TTTGACCTTGAAAAT CACCGCACTTTCCAGT TTGC ACTAAAAAGTGCGGTG CATTTTTCATTTATT TERM 1712 1170747 - 1170716 - G 95 -14.6 -3.09004 | opp_overlap 1170714 1170713 1170713 1170707 1170716, overlap 1170714 1170713 TGACCTTGAAAATCA CCGCACTTTCCAGT TTGC ACTAAAAAGTGCGG TGCATTTTTCATTTA TERM 1713 1170716 - 1170747 + r 79 -10.2 -2.90395 | opp_overlap 1170716 1170714 1170713, overlap 1170714 1170713 1170713 1170707 TGACCTTGAAAATCA CCGCACTTTCCAGT TTGC ACTAAAAAGTGCGG TGCATTTTTCATTTA nrfA 1172376 - 1170760 - | cytochrome c nitrite reductase TERM 1714 1171214 - 1171239 + g 78 -3.3 -5.41941 | TCTTTCACTTCTTTT TTACGTGAAGT AACA ATATCGCGTAA TTTTTCTTTGCTTTG TERM 1715 1172209 - 1172224 + g 70 -9 -3.07994 | opp_overlap 1172208 1172209 TGGCTTATATACAAG CTCAGC AGTG GCTGAG TTAAATAAGCTTAAA TERM 1716 1172519 - 1172495 - R 100 -13 -4.16842 | opp_overlap 1172495 GTTATTTTGAATAAA TTAAGGCGGT ATAAA ACCGCCTTAA TTTTGAGTATTATTA TERM 1717 1172495 - 1172519 + r 100 -13 -4.32048 | opp_overlap 1172495 GTTATTTTGAATAAA TTAAGGCGGT ATAAA ACCGCCTTAA TTTTGAGTATTATTA hrpA 1176374 - 1172538 - | ATP-dependent RNA helicase HrpA TERM 1718 1173837 - 1173860 + g 79 -7.6 -4.29845 | opp_overlap 1173843, overlap 1173838 CGCATCGGTACCTGG TTCAAATTGA TAAG TCAATTTGAG TTTTAAATTACCTTG TERM 1719 1173838 - 1173859 + g 70 -8.9 -3.17184 | opp_overlap 1173843, overlap 1173837 GCATCGGTACCTGGT TCAAATTGA TAAG TCAATTTGA GTTTTAAATTACCTT TERM 1720 1174704 - 1174724 + g 78 -3.4 -5.3798 | gap 1 TTGGCACTGACGACG GAATTG-GT TTTT ACTCAATTC TTTTTGTTGTTCTTG TERM 1721 1174956 - 1174972 + g 78 -10.9 -2.78395 | overlap 1174958 GACTGGAAGTTGAGC GAGTTGG CGA CCAACTC TAGTTAATAGGCGTT TERM 1722 1176341 - 1176373 + g 90 -12.7 -2.74256 | opp_overlap 1176341, overlap 1176338 1176335 1176332 TTCCAATACCATGAA TGCGGGCGGATAAGC GAC GTTGATCCACCCGCA TGATGTCATTTAATT TERM 1723 1176373 - 1176341 - G 95 -12.7 -3.27923 | opp_overlap 1176341 1176338 1176335 1176332 TTCCAATACCATGAA TGCGGGCGGATAAGC GAC GTTGATCCACCCGCA TGATGTCATTTAATT NTHI1232 1176817 - 1176443 - | putative small membrane protein NTHI1233 1177270 - 1176818 - | hypothetical protein TERM 1724 1177042 - 1177029 - G 79 -6.7 -4.78572 | opp_overlap 1177038, overlap 1177038 TTCCAACTAAGAAAA CCTGA TAAA TCAGG CAACTGAATTTTTCC TERM 1725 1177373 - 1177399 + r 90 -11 -3.76402 | opp_overlap 1177378, overlap 1177378 TAAATGAGAAAAGTT AAAAAGGGTTCA TTA TGAACCCTTTTA TTTAGTCGGTAAAAT TERM 1726 1177394 - 1177378 - R 100 -10.9 -4.89729 | opp_overlap 1177378 1177373 GAGAAAAGTTAAAAA GGGTTCA TTA TGAACCC TTTTATTTAGTCGGT TERM 1727 1177378 - 1177394 + r 100 -10.9 -4.9448 | opp_overlap 1177378, overlap 1177373 GAGAAAAGTTAAAAA GGGTTCA TTA TGAACCC TTTTATTTAGTCGGT cyoB 1178672 - 1177536 - | putative cytochrome oxidase subunit II TERM 1728 1177854 - 1177833 - G 78 -7.3 -4.37092 | overlap 1177848 ATTCGCTTTAGAAAA TGCAGCATT TAAT AATGCAGCA ACTACAGCTAAAGCA cyoA 1180252 - 1178687 - | cytochrome oxidase subunit I TERM 1729 1179763 - 1179789 + g 75 -9.6 -3.2827 | overlap 1179783 TCATTTCCATACGTA CAGTTTCAAAAT TAA ATTTTGAACCTG TTGGTGCTTGCATCC TERM 1730 1180633 - 1180644 + H 70 -4.4 -4.7078 | opp_overlap 1180630 1180633 TGTCTCAACCAACAT CATC TCTT GATG TTTTTAACTGCTTGA pyrG 1180905 - 1182542 + | CTP synthetase TERM 1731 1182628 - 1182656 + T 100 -14.8 -5.26918 | opp_overlap 1182628 TTTGAAGTAAAAAAA TCCCCGTTAAAT TTATC ATTTAACGGGGA TTTTTTATAAGCTAT TERM 1732 1182656 - 1182628 - T 100 -14.8 -5.63103 | opp_overlap 1182628 TTTGAAGTAAAAAAA TCCCCGTTAAAT TTATC ATTTAACGGGGA TTTTTTATAAGCTAT pnuC 1183367 - 1182687 - | nicotinamide riboside transporter NTHI1241 1184322 - 1183549 - | putative amino-acid ABC transporter ATP-binding protein NTHI1242 1185003 - 1184326 - | amino-acid ABC transporter permease protein TERM 1733 1184991 - 1184968 - G 100 -14 -4.19472 | opp_overlap 1184968 CAACATAGGCCAAAA CGAGCTGATT ACAT AATCAGCTCG TTCTGCACTCATAAA TERM 1734 1184968 - 1184991 + g 100 -14 -3.34043 | opp_overlap 1184968 CAACATAGGCCAAAA CGAGCTGATT ACAT AATCAGCTCG TTCTGCACTCATAAA NTHI1243 1185799 - 1185026 - | amino-acid ABC transporter binding protein TERM 1735 1186018 - 1186037 + r 86 -10.8 -3.17714 | opp_overlap 1186018 ATTTCAGTAAAAAAA TGCCTTTC TAAA GAAAGGCA TTAATAGAAATTTAA TERM 1736 1186037 - 1186018 - R 100 -10.8 -5.52986 | opp_overlap 1186018 ATTTCAGTAAAAAAA TGCCTTTC TAAA GAAAGGCA TTAATAGAAATTTAA murA 1187374 - 1186100 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1737 1186392 - 1186377 - G 72 -6.2 -4.4727 | opp_overlap 1186377 GGAATATGCATAAAA CGATTT TCAA AAATCG TTTCAGTGATAATGC NTHI1245 1187642 - 1187385 - | BolA family transcriptional regulator NTHI1246 1187980 - 1187663 - | NTP binding protein, contains STAS domain NTHI1247 1188635 - 1187991 - | ABC transporter TERM 1738 1188261 - 1188271 + g 76 -4 -5.27477 | TAATTCTTTTTCTGA TTCA ATT TGAA TTTTTTGATTAGAAT NTHI1248 1189168 - 1188668 - | ABC transporter periplasmic protein NTHI1249 1189963 - 1189178 - | ABC transporter permease TERM 1739 1189226 - 1189215 - G 70 -3 -5.10933 | GCAGTCAAAATAAAA TCTA ATCC TAGA ACAACAAGTGAAGCG NTHI1250 1190754 - 1189960 - | ABC transporter ATPase TERM 1740 1191151 - 1191124 - R 77 -10 -3.0173 | opp_overlap 1191124 1191130 1191142, overlap 1191121 1191130 ATAGAGAGGAAAGCA GAAAAACCTAAC TTTT GCTAGGTTTTCC TATGTTTATTATTTT TERM 1741 1191145 - 1191130 - R 79 -5.4 -5.05228 | opp_overlap 1191124 1191130 1191142, overlap 1191124 1191121 AGGAAAGCAGAAAAA CCTAAC TTTT GCTAGG TTTTCCTATGTTTAT sodA 1191807 - 1191160 - | superoxide dismutase TERM 1742 1191365 - 1191387 + g 70 -7 -3.75332 | overlap 1191368 AATGGGTTATCTTGG TTTGCTGTTG ATA CAACGGCTAA TTTACCTTCAGCGGT ccmA 1192056 - 1192694 + | cytochrome c biogenesis protein CcmA ccmB 1192699 - 1193364 + | heme exporter protein B ccmC 1193425 - 1194165 + | heme exporter protein C ccmD 1194208 - 1194411 + | heme exporter protein D ccmE 1194408 - 1194929 + | cytochrome c-type biogenesis protein CcmE ccmF 1194926 - 1196872 + | cytochrome c-type biogenesis protein CcmF TERM 1743 1196881 - 1196904 + F 100 -15.4 -2.74488 | opp_overlap 1196873 1196872, overlap 1196873 GAAATAGTTTATACT GCCATGGGTA GGTA TACCCATGGC TAATTGAAATGGTTC TERM 1744 1196917 - 1196931 + F 82 -10 -3.60627 | opp_overlap 1196915 GGCTAATTGAAATGG TTCCCC TTT GGGGAA TTTCAACTAGCCTCA TERM 1745 1196939 - 1196955 + F 83 -10.9 -3.13772 | opp_overlap 1196941 1196951, overlap 1196937 TTGGGGAATTTCAAC TAGCCTC AAA GAGGCTA TACTTTTACTAGCCT TERM 1746 1196953 - 1196941 - f 72 -9.1 -2.75481 | opp_overlap 1196939 1196937, overlap 1196951 GGGGAATTTCAACTA GCCTC AAA GAGGC TATACTTTTACTAGC TERM 1747 1196961 - 1196995 + F 89 -9.5 -4.14243 | gap 1, opp_overlap 1196951 AAAGAGGCTATACTT TTACTAGCCTAGGGTA TACT TACCCTAGGC-ACTAA TTTTAAAGTGCGGTA dsbE 1197015 - 1197560 + | thiol-disulfide interchange protein TERM 1748 1198259 - 1198233 - f 80 -7.3 -4.6391 | overlap 1198212 AAGAATTACAGAAAA CCTTGCTTGAT GATGT ACCGAGCAAGG TTCAAGAGAATGTGG TERM 1749 1199367 - 1199381 + G 76 -8.6 -3.85698 | AATTCTATGGCAGTG TGGTTG GTG CAACCA TTTATAACCAAAAAG NTHI1262 1199060 - 1199551 + | hypothetical protein NTHI1263 1199553 - 1199861 + | hypothetical protein ligA 1201878 - 1199866 - | NAD-dependent DNA ligase LigA TERM 1750 1201952 - 1201930 - R 78 -7.8 -4.11692 | TATTTAGCGTGAAAA TAGACAGG TACAAAG CCTGTCTA AATGAATATAAAAGT zipA 1202976 - 1201990 - | cell division protein ZipA TERM 1751 1203697 - 1203671 - g 80 -11.1 -3.15354 | opp_overlap 1203652 1203670 1203669 1203667 1203692, overlap 1203669 1203692 GATGGCAATTCAATA TTGTGATTATC CTTTT GATAATCACAA AGTCTCTTTTGATAT cysZ 1203129 - 1203947 + | putative sulfate transport protein CysZ cysK 1204046 - 1204996 + | cysteine synthase TERM 1752 1205041 - 1205005 - T 85 -4.6 -5.72622 | gap 1, opp_overlap 1205012, overlap 1205008 1205012 GGGATAAACAAAAAA GAATAAA-GTGCGGTGA ATTT TTACCGCACTTTTATTA AGACTAGAGTAGTTC TERM 1753 1205037 - 1205008 - T 88 -7.9 -4.9072 | opp_overlap 1205012, overlap 1205005 1205012 ATAAACAAAAAAGAA TAAAGTGCGGTGA ATTT TTACCGCACTTTT ATTAAGACTAGAGTA TERM 1754 1205012 - 1205033 + T 100 -10.9 -4.64676 | opp_overlap 1205012 1205008 1205005 ACAAAAAAGAATAAA GTGCGGTGA ATTT TTACCGCAC TTTTATTAAGACTAG TERM 1755 1205033 - 1205012 - T 95 -8.7 -4.86216 | opp_overlap 1205012, overlap 1205008 1205005 ACAAAAAAGAATAAA GTGCGGTGA ATTT TTACCGCAC TTTTATTAAGACTAG TERM 1756 1205056 - 1205077 + T 73 -7.4 -3.77607 | opp_overlap 1205073, overlap 1205059 AAGACTAGAGTAGTT CAATCTGA ATGACA TCAGATTG TTTAATCCCCTTATT TERM 1757 1205417 - 1205433 + T 81 -5.8 -4.9448 | TTGGACTCTGATTGG TGCCGT ATTTG GCGGCA TTTTATTTGGTGCAT TERM 1758 1206513 - 1206483 - T 93 -11.3 -4.07119 | opp_overlap 1206489, overlap 1206489 AGAAAATATAAAAGA TAAAAATGCTCGC CAAGT GCGAGCATTTTTT ATGAAACAAGTCATC TERM 1759 1206489 - 1206507 + T 100 -10.3 -5.24129 | opp_overlap 1206489 1206483 TATAAAAGATAAAAA TGCTCGC CAAGT GCGAGCA TTTTTTATGAAACAA TERM 1760 1206507 - 1206489 - T 100 -10.3 -5.32599 | opp_overlap 1206489, overlap 1206483 TATAAAAGATAAAAA TGCTCGC CAAGT GCGAGCA TTTTTTATGAAACAA rfaF 1207617 - 1206577 - | ADP-heptose--lipooligosaccharide heptosyltransferase II TERM 1761 1207077 - 1207067 - G 76 -5.4 -4.93296 | GCACCAGGACAAAAA CCAA TAA TTGG ACGCTCGCCTAAAAG xylR 1208856 - 1207693 - | xylose operon regulatory protein TERM 1762 1208952 - 1208922 - R 85 -12.1 -3.04461 | opp_overlap 1208928 1208930, overlap 1208909 1208928 1208930 TATTTAGCTTCAAGA TAAAAATAGCCAG AATAA CTGGCCATTTTTA TATCCAATACCACAT TERM 1763 1208946 - 1208928 - R 84 -6.7 -5.0916 | opp_overlap 1208928 1208930, overlap 1208922 1208930 GCTTCAAGATAAAAA TAGCCAG AATAA CTGGCCA TTTTTATATCCAATA TERM 1764 1208928 - 1208946 + r 73 -4.5 -4.9792 | opp_overlap 1208928 1208922 1208930, overlap 1208930 GCTTCAAGATAAAAA TAGCCAG AATAA CTGGCCA TTTTTATATCCAATA TERM 1765 1208944 - 1208930 - R 75 -7.1 -4.17211 | opp_overlap 1208930 1208928, overlap 1208928 1208922 TTCAAGATAAAAATA GCCAG AATAA CTGGC CATTTTTATATCCAA NTHI1274 1210374 - 1208968 - | Na(+)/H(+) antiporter TERM 1766 1209173 - 1209183 + g 76 -5.4 -4.87665 | CGACTTAGATTTTTT GGAT GTA ATCC TTTTTCTACATACGC aspC2 1211548 - 1210376 - | putative aspartate aminotransferase TERM 1767 1211202 - 1211233 + g 72 -6 -4.43844 | opp_overlap 1211206, overlap 1211207 AATATTGGACTATAT GAAGGTGATAGAAT ACAT ATTCCATCATTTTC TTTTGTAAATGCTCG TERM 1768 1211207 - 1211228 + g 79 -4.5 -5.19275 | opp_overlap 1211206, overlap 1211202 TGGACTATATGAAGG TGATAGAAT ACAT ATTCCATCA TTTTCTTTTGTAAAT TERM 1769 1211807 - 1211792 - g 79 -4.7 -5.28315 | ATAAAATTGAAAAAA TCTCC TTTGAG GGAGA AAAATCCACAAATCC xylA 1211761 - 1213080 + | xylose isomerase TERM 1770 1213094 - 1213115 + G 100 -7.3 -5.79595 | opp_overlap 1213089 1213094 AAAAATGAAGCAAAA GTGCGGT TGTATTTC ACCGCAC TTTTTTATTTTAGGA TERM 1771 1213115 - 1213094 - g 79 -7.3 -4.56636 | opp_overlap 1213094, overlap 1213089 AAAAATGAAGCAAAA GTGCGGT TGTATTTC ACCGCAC TTTTTTATTTTAGGA TERM 1772 1213852 - 1213879 + G 72 -9.2 -2.78463 | opp_overlap 1213850, overlap 1213855 GTTTTAATGAGAATG TCATCGTCTCCA CAGG TGGAGGCGATAA TATGATGGGAGCAAT TERM 1773 1213855 - 1213876 + G 78 -10.9 -2.66316 | opp_overlap 1213850, overlap 1213852 TTAATGAGAATGTCA TCGTCTCCA CAGG TGGAGGCGA TAATATGATGGGAGC xylB 1213083 - 1214618 + | xylulose kinase TERM 1774 1214651 - 1214625 - T 90 -8.1 -4.97158 | gap 1, opp_overlap 1214625 TTATATTAAATAAAA TCCCCTAT-GCC GATA AGCTATAGGGGA TTTACTACATTAATA TERM 1775 1214625 - 1214651 + T 73 -7.4 -3.80114 | gap 1, opp_overlap 1214625 TTATATTAAATAAAA TCCCCTAT-GC CGATAA GCTATAGGGGA TTTACTACATTAATA rfaD 1215595 - 1214669 - | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 1776 1214698 - 1214718 + g 73 -6.8 -4.26681 | ACCACGCCATATATT CAGTCACG CCTTC CGCGACTG TTTTGAATGGTTTAT NTHI1279 1216151 - 1215648 - | thioredoxin-like protein deoC 1216262 - 1216933 + | deoxyribose-phosphate aldolase TERM 1777 1216942 - 1216963 + T 100 -10.1 -4.74706 | TTACTAATCCTTTCA CGCGTGGTA TTCT TTCCACGCG TTTTTACATATTCGA comM 1218496 - 1216967 - | competence protein ComM TERM 1778 1218052 - 1218019 - G 70 -6.1 -4.24948 | GCACTACATCTAAAA GCGTTTGAGCAAAAT AAGT ATTTTGATCAGACAC GAGCGAGGCTTCATT TERM 1779 1218577 - 1218550 - R 100 -11.4 -5.67063 | opp_overlap 1218550 TGCACTATAAAAAAA GCACGTAATGAA ATCA TTCATTCCGTGC TTTTTTTGCGATCTA TERM 1780 1218550 - 1218577 + r 100 -11.4 -5.45726 | opp_overlap 1218550 TGCACTATAAAAAAA GCACGTAATGAA ATCA TTCATTCCGTGC TTTTTTTGCGATCTA TERM 1781 1218581 - 1218602 + r 86 -10.3 -3.63516 | TTCATTCCGTGCTTT TTTTGCGAT CTAG ATCGCAAAA TTCATATTTTATTTC engB 1219228 - 1218611 - | GTPase EngB NTHI1285 1219321 - 1220199 + | D-xylose transport permease protein TERM 1782 1220230 - 1220209 - T 95 -8.7 -5.0925 | opp_overlap 1220209 TTGTAAAAGTAAAAA GTGCGGTGA ATTT TAACCGCAC TTTTTGTTTTATAAG TERM 1783 1220209 - 1220230 + T 95 -8.7 -5.54907 | opp_overlap 1220209 TTGTAAAAGTAAAAA GTGCGGTGA ATTT TAACCGCAC TTTTTGTTTTATAAG oppF 1221237 - 1220239 - | oligopeptide transport ATP-binding protein oppD 1222205 - 1221234 - | oligopeptide transporter ATP-binding component oppC 1223150 - 1222215 - | oligopeptide transport system permease protein oppB 1224080 - 1223160 - | oligopeptide transporter permease TERM 1784 1224063 - 1224029 - G 70 -5.1 -4.56636 | gap 1, opp_overlap 1224045 AAAAAGTAATCAAAA TAAACAGC-GTCGGTA AGGC TTCCAACAGCCGTTTA AAAATAAACTTGAGC TERM 1785 1224142 - 1224108 - R 89 -9.5 -4.14013 | opp_overlap 1224108 CAAAATGGGCGAAAA GTGCGGTCAAAAA ATACGACGA TTTTTAACCGCAC TTAAATACGAGCAAC oppA 1225786 - 1224161 - | periplasmic oligopeptide-binding protein TERM 1786 1225540 - 1225561 + g 70 -7.3 -3.75629 | overlap 1225541 GTGTATTTTCCCAGC TTTCAGCCG CACC CGGTTGAAG TTTACCTTCAGAGTC talB 1226081 - 1227034 + | transaldolase B TERM 1787 1227070 - 1227118 + F 100 -13.5 -5.80003 | opp_overlap 1227085 ATAACCGCACTTCAA TCTGCTCTTGAATTAGTTAAAGA AAA TATTTAACTAATTTGAGTGCAGA TTTTTTATTTATTAA NTHI1295 1228095 - 1229696 + | carbon starvation protein, membrane protein TERM 1788 1229719 - 1229745 + F 100 -13.9 -5.83211 | opp_overlap 1229719 AATTTGATGAAAAAA GCCGTTTGAAT TGTTT ATTCAAACGGC TTTTTTATTTTGATA TERM 1789 1229745 - 1229719 - f 100 -13.9 -5.16237 | opp_overlap 1229719 AATTTGATGAAAAAA GCCGTTTGAAT TGTTT ATTCAAACGGC TTTTTTATTTTGATA mraZ 1229898 - 1230353 + | cell division protein MraZ mraW 1230384 - 1231349 + | S-adenosyl-methyltransferase MraW ftsL 1231352 - 1231675 + | cell division protein FtsL TERM 1790 1231747 - 1231734 - g 93 -3.9 -5.86332 | GTAAGTCAAAAAAAA CAATT AGAA AATTG ACCGCACCTGAAACT TERM 1791 1232146 - 1232130 - g 75 -2.3 -5.47821 | opp_overlap 1232130 ATTTAGTGAAAAAAA TTGAGAA AAA TTCTAAA TCTGGTTATTTGTAT ftsI 1231688 - 1233520 + | peptidoglycan synthetase FtsI murE 1233530 - 1234996 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase murF 1235010 - 1236383 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase mraY 1236377 - 1237459 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 1792 1237473 - 1237503 + F 100 -15.6 -4.32482 | overlap 1237468 AATAAATGTTGTGAG GTTCGCTCTTTCAG TTT TTGAAAGAGCGAGC TTTTACGTTATAAAT murD 1237571 - 1238884 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ftsW 1238907 - 1240091 + | cell division protein FtsW murG 1240103 - 1241158 + | N-acetylglucosaminyl transferase murC 1241296 - 1242723 + | UDP-N-acetylmuramate--L-alanine ligase ddl 1242792 - 1243712 + | D-alanine--D-alanine ligase TERM 1793 1243796 - 1243760 - g 72 -8.9 -3.28791 | opp_overlap 1243765, overlap 1243765 ATTCGTTTTGGAGAA CAAAAGCCTAAATATTA TTT TCATATTCGGGCTTTTG CGGTATTGCTTGGTG TERM 1794 1243954 - 1243938 - g 70 -5.1 -4.54205 | ATGATATTAAAGAAA GCCTATT AAA AATGGGC GAATTAAAAGGATTT ftsQ 1243712 - 1244476 + | cell division protein FtsQ ftsA 1244495 - 1245772 + | cell division protein FtsA TERM 1795 1246259 - 1246273 + G 72 -7.8 -3.73534 | GTGGCGGCACAGGTA CGGGTG CGG CACCTG TTGTTGCTAAAATTG TERM 1796 1246640 - 1246630 - g 70 -8.2 -3.29144 | TCAGCGGTGGGAGAA CCCG GTG CGGG TAGAGCAGAAGAGGC TERM 1797 1246663 - 1246653 - g 70 -8.2 -3.30651 | opp_overlap 1246662, overlap 1246651 GGGTAGAGCAGAAGA GGCG GCT CGCC TTGCGGTACGTAACG ftsZ 1245856 - 1247121 + | cell division protein FtsZ lpxC 1247160 - 1248077 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 1798 1248097 - 1248122 + F 93 -7.7 -5.69793 | opp_overlap 1248097 TTTATTGTTGAAAAA GCTATATTTCT GGTG GGAAGTATAGC TTTTTTATTTCATCT pheA 1248204 - 1249361 + | P-protein TERM 1799 1249402 - 1249367 - T 100 -12.9 -5.41143 | gap 1, opp_overlap 1249367 GAGCGTGTAAAAAAA GTGCGGTCAATAAAAA TGATG TTTTTAT-GACCGCAC TTTTTATATTTTTTT TERM 1800 1249367 - 1249402 + T 100 -13.6 -5.44837 | gap 1, opp_overlap 1249367 GAGCGTGTAAAAAAA GTGCGGTCAATAAAAAT GAT GTTTTTA-TGACCGCAC TTTTTATATTTTTTT NTHI1314 1250263 - 1249406 - | hypothetical protein ptsN 1250775 - 1250281 - | nitrogen regulatory IIA protein NTHI1316 1251503 - 1250778 - | ABC transporter ATP-binding protein NTHI1317 1252025 - 1251507 - | hypothetical protein NTHI1318 1252614 - 1252006 - | hypothetical protein NTHI1319 1253200 - 1252664 - | hypothetical protein TERM 1801 1254310 - 1254297 - g 83 -6.7 -5.04385 | TACAGTGGTAAAAAA CTTGG TATG CCAAG TACAGGGCATGCTGG pmbA 1253289 - 1254644 + | hypothetical protein TERM 1802 1254776 - 1254798 + F 100 -7 -6.04324 | opp_overlap 1254776 1254778 GTTAGGGTTCAAAAA GGCTGAAGGT TTA AACTTCAGTC TTTTTTATTTTTTGA TERM 1803 1254940 - 1254962 + F 100 -10.6 -5.94713 | opp_overlap 1254940 GGGCAGGAATACAAA GGCTGAAGGT TTA AACTTCAGCC TTTTTTTTGTAAAAT TERM 1804 1254962 - 1254940 - f 100 -10.6 -4.23674 | opp_overlap 1254940 GGGCAGGAATACAAA GGCTGAAGGT TTA AACTTCAGCC TTTTTTTTGTAAAAT hpt 1255019 - 1255558 + | hypoxanthine-guanine phosphoribosyltransferase TERM 1805 1255567 - 1255620 + F 93 -9.9 -4.11039 | opp_overlap 1255576, overlap 1255576 AGAATAATTTGATTT TATTGAAAAGTGCGGTTGAAATTTT AAAT GAATTTTTAGCCGCACTTTTTTATA TTATTTCATTGCTAT TERM 1806 1255576 - 1255611 + F 93 -8.4 -5.57729 | opp_overlap 1255576, overlap 1255567 TGATTTTATTGAAAA GTGCGGTTGAAATTTT AAAT GAATTTTTAGCCGCAC TTTTTTATATTATTT TERM 1807 1255693 - 1255704 + F 76 -4.4 -5.16681 | ATTATATTGATAATC TTGC TGGG GCAA TTTTCTTATTTTTCG TERM 1808 1255829 - 1255857 + F 84 -5.5 -5.55695 | gap 1 TACTGAAGTTGATAG TCTCCAAACACT TTAATC AGT-TTTGGAGA TTTTTTATGTTATTA TERM 1809 1255882 - 1255895 + G 81 -3.1 -5.54885 | TTATTAGTCAATTTG GCGAT ATTT ATTGC TTTTTTATTGCTGTT TERM 1810 1257004 - 1257035 + G 78 -10.8 -2.84192 | gap 1, overlap 1257004 TCTTCATTCGGTATC GCAGGCGTAGGTGGC GGA GCCACATTCGCC-GC TATCGTCGTGCTATC NTHI1323 1255864 - 1257186 + | Na+/dicarboxylate symporter TERM 1811 1257206 - 1257231 + T 100 -11.3 -5.28176 | opp_overlap 1257206 AAATCAATAAAAAAA TCTGCAATTGA GAAT TCAGTTGCAGA TTTTTTATCGCTCAA TERM 1812 1257231 - 1257206 - T 100 -9.1 -5.9003 | opp_overlap 1257206 AAATCAATAAAAAAA TCTGCAATTGA GAAT TCAGTTGCAGA TTTTTTATCGCTCAA nrdG 1257753 - 1257286 - | anaerobic ribonucleotide reductase-activating protein TERM 1813 1257648 - 1257660 + g 70 -7.7 -3.54543 | opp_overlap 1257637, overlap 1257637 ATGACCAACTTTTTT GGTTG TAG CAACC TTTGCAAGCGTGCGT TERM 1814 1257994 - 1257967 - R 70 -8.4 -3.28791 | opp_overlap 1257967, overlap 1257970 ACTGTGTGCCGAGAA GAAGCTGGGAAG GTTT CCGCCCAACTTC CTTTTCTCATACTCG cydC 1259731 - 1258001 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1815 1259387 - 1259373 - G 73 -7.2 -4.07647 | opp_overlap 1259372, overlap 1259369 1259385 ACATCGGAAACTAAA CGATTT AAT AAATCG CTGTTGCGATAACGA TERM 1816 1259396 - 1259385 - G 70 -5.8 -4.23647 | opp_overlap 1259372, overlap 1259373 AAACGATTTAATAAA TCGC TGTT GCGA TAACGATTTAATACC cydD 1261491 - 1259731 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1817 1260453 - 1260470 + g 76 -2.7 -5.48054 | overlap 1260456 CAGAAATTTCAACCG CACTTTC TAAA GAAATTG TTTTTTCATTTTGAT TERM 1818 1261049 - 1261035 - G 73 -6.4 -4.34008 | overlap 1261032 CAGCAATGAAAATAA CCACTG GAA CAATGG CTGAAAGACTTTGTT TERM 1819 1261126 - 1261140 + g 73 -4.2 -4.9445 | CAACATAATGCTTGC CCAACT TCC AGCTGG TTTTTGATTGATTGT TERM 1820 1261550 - 1261517 - R 100 -9.7 -5.00895 | opp_overlap 1261518, overlap 1261518 GTGATTATAGAAAAA GTTCCCCTCTTTAAA AGAG TTAAAAGAGGGGAAT TGGTTAGAAGATTTA TERM 1821 1261518 - 1261549 + r 93 -13.2 -3.35088 | opp_overlap 1261518 1261517 TGATTATAGAAAAAG TTCCCCTCTTTAAA AGAG TTAAAAGAGGGGAA TTGGTTAGAAGATTT TERM 1822 1261549 - 1261518 - R 95 -13.2 -3.59814 | opp_overlap 1261518, overlap 1261517 TGATTATAGAAAAAG TTCCCCTCTTTAAA AGAG TTAAAAGAGGGGAA TTGGTTAGAAGATTT trxB 1262519 - 1261563 - | thioredoxin reductase NTHI1328 1263450 - 1262593 - | thioredoxin domain-containing protein TERM 1823 1263480 - 1263443 - G 72 -4.9 -4.74012 | opp_overlap 1263443, overlap 1263438 ACGATAAAAGGAAAA TCAGCCATGTTTTATCC TTGT GAAAAAATAATGGCTGA TTTTAGCAAAGTGCG hemH 1264500 - 1263529 - | ferrochelatase NTHI1330 1264913 - 1264497 - | hypothetical protein NTHI1331 1268010 - 1264927 - | hypothetical protein ompP5 1268385 - 1269464 + | Outer membrane protein P5 TERM 1824 1269499 - 1269530 + F 93 -9.6 -4.20531 | opp_overlap 1269504, overlap 1269504 AAAGATTAAATACAG AAAAAGGCTTAAAC TTCG GTTTAGGCCTTTTG TTTTAAATGAATATA TERM 1825 1269504 - 1269525 + F 100 -9.5 -5.10933 | opp_overlap 1269504, overlap 1269499 TTAAATACAGAAAAA GGCTTAAAC TTCG GTTTAGGCC TTTTGTTTTAAATGA TERM 1826 1269525 - 1269504 - f 88 -7.3 -5.14985 | opp_overlap 1269504 1269499 TTAAATACAGAAAAA GGCTTAAAC TTCG GTTTAGGCC TTTTGTTTTAAATGA NTHI1333 1269576 - 1269938 + | glutaredoxin-related protein TERM 1827 1269977 - 1269953 - T 93 -8.6 -4.65168 | opp_overlap 1269958, overlap 1269958 ATCACAGTGGAAAAA TAAAACCCGC AATAA GCGGGTTTTT TATATAATAAGTTTC TERM 1828 1269958 - 1269972 + T 95 -8.5 -5.39721 | opp_overlap 1269953 1269958 AGTGGAAAAATAAAA CCCGC AATAA GCGGG TTTTTTATATAATAA TERM 1829 1269972 - 1269958 - T 95 -8.5 -5.27023 | opp_overlap 1269958, overlap 1269953 AGTGGAAAAATAAAA CCCGC AATAA GCGGG TTTTTTATATAATAA NTHI1334 1271115 - 1270015 - | histidinol-phosphate aminotransferase TERM 1830 1270859 - 1270875 + g 76 -3 -5.44721 | overlap 1270869 CCGAGTGTAATTTGA TTTGGT TGAAC GCCAAA TTTTTTTGCGATAGT TERM 1831 1271187 - 1271167 - R 82 -11.2 -2.54639 | overlap 1271166 1271165 ATTTTTAAATAAATT TGGGCGTA GTAAA TACGCCCA TTGGAAATATTTTTC serC 1272291 - 1271203 - | phosphoserine aminotransferase NTHI1336 1272482 - 1272826 + | hypothetical protein TERM 1832 1272836 - 1272861 + T 89 -7 -5.26918 | gap 1, opp_overlap 1272835 1272840, overlap 1272840 1272857 AAATAATAGGATAAC TAGAGCCGACT AAATC AGTCGGCT-TA TTTTTTATAAGCTAT TERM 1833 1272858 - 1272840 - T 83 -11 -2.99188 | opp_overlap 1272836 1272840 1272857, overlap 1272835 AATAGGATAACTAGA GCCGACTA AAT CAGTCGGC TTATTTTTTATAAGC TERM 1834 1272840 - 1272858 + T 100 -10.3 -4.72201 | opp_overlap 1272840 1272835, overlap 1272836 1272857 AATAGGATAACTAGA GCCGACT AAATC AGTCGGC TTATTTTTTATAAGC NTHI1337 1273432 - 1272866 - | hypothetical protein NTHI1338 1274418 - 1273432 - | para-aminobenzoate synthase component I trpG2 1274460 - 1275041 + | para-aminobenzoate synthase component II metK 1275126 - 1276280 + | S-adenosylmethionine synthetase TERM 1835 1276316 - 1276345 + F 71 -7.9 -3.57507 | opp_overlap 1276320, overlap 1276313 1276320 GAAAGGCTTATATTG AAAAGGCAACAAG GTTT CTTGTTGCCTTAG TTGGTTTAGGTTGCT TERM 1836 1276341 - 1276320 - f 100 -13.1 -4.2349 | opp_overlap 1276316 1276313 1276320 GGCTTATATTGAAAA GGCAACAAG GTTT CTTGTTGCC TTAGTTGGTTTAGGT TERM 1837 1276320 - 1276341 + F 93 -13.1 -3.50532 | opp_overlap 1276320, overlap 1276316 1276313 GGCTTATATTGAAAA GGCAACAAG GTTT CTTGTTGCC TTAGTTGGTTTAGGT TERM 1838 1276545 - 1276559 + F 88 -7.1 -5.0925 | opp_overlap 1276544 1276545, overlap 1276539 TCTATCATATAAAAG CCGCT TATCT AGCGG TTTTTGCTTTTACCG TERM 1839 1276824 - 1276844 + G 70 -7 -3.74693 | CCACATGAGCTTGCG CATTTGAT TGTGT ATCAAATG TTTGGTCGCGTAAAA sprT 1276575 - 1277090 + | hypothetical protein opa 1277141 - 1277653 + | opacity protein TERM 1840 1277695 - 1277725 + T 95 -14.2 -3.25823 | opp_overlap 1277698, overlap 1277698 TAAAACACTTTAATT TAACGGTGATCGTT TAA AACAATCACCGTTA TTGGTATCAGCAGAG TERM 1841 1277722 - 1277698 - T 93 -13.7 -3.19018 | opp_overlap 1277695 1277698 AACACTTTAATTTAA CGGTGATCGTT TAA AACAATCACCG TTATTGGTATCAGCA TERM 1842 1277698 - 1277722 + T 90 -11.5 -3.7732 | opp_overlap 1277698, overlap 1277695 AACACTTTAATTTAA CGGTGATCGTT TAA AACAATCACCG TTATTGGTATCAGCA NTHI1344 1277994 - 1277689 - | hypothetical protein TERM 1843 1278145 - 1278126 - R 70 -3.6 -4.87626 | overlap 1278128 GCTTAATATCAAAAA TATGTGAT CAAG ATCACAAA ATAAAAAATCCCAAC TERM 1844 1278171 - 1278154 - R 95 -6.3 -5.86976 | opp_overlap 1278154 TCACAAAATAAAAAA TCCCAAC GGAG ATTGGGA TTTAAAATCACTAAA artM 1278884 - 1278201 - | arginine transporter permease subunit ArtM artQ 1279549 - 1278884 - | arginine transporter permease subunit ArtQ TERM 1845 1279114 - 1279132 + g 72 -8.8 -3.32963 | opp_overlap 1279111 1279110 1279118 GGTTGCTTAAACCAG GTAAGGCG TGA CGCCATAC TTGTGGCATAACAAT TERM 1846 1279474 - 1279453 - G 74 -5.9 -4.64598 | overlap 1279456 CAAGCACGGCAAAAA TAAGGCTTA AAAA TAAGCCTAA GAGCAATGAACAGAC TERM 1847 1279471 - 1279456 - G 80 -7.6 -4.42748 | overlap 1279453 GCACGGCAAAAATAA GGCTTA AAAA TAAGCC TAAGAGCAATGAACA artI 1280272 - 1279553 - | arginine-binding periplasmic protein artP 1281021 - 1280290 - | arginine transporter ATP-binding subunit TERM 1848 1281099 - 1281115 + r 89 -9.5 -4.09864 | opp_overlap 1281099 GCTATTAATAAAAAA TCCCAAA AAA TTTGGGA TTTTAAAAACTCGAT TERM 1849 1281115 - 1281099 - R 100 -9.5 -5.5112 | opp_overlap 1281099 GCTATTAATAAAAAA TCCCAAA AAA TTTGGGA TTTTAAAAACTCGAT gmhA 1281731 - 1281147 - | phosphoheptose isomerase TERM 1850 1281827 - 1281809 - H 74 -3.2 -5.28942 | opp_overlap 1281815 TAGCCTAAATAAAAA TTCATC TTTTTTC GATGAA ATAATGATTTTTTGC ligA 1281831 - 1282745 + | DNA ligase dppF 1283757 - 1282774 - | dipeptide transporter ATP-binding subunit dppD 1284752 - 1283760 - | dipeptide transporter ATP-binding subunit dppC 1285649 - 1284762 - | dipeptide transport system permease protein dppB 1286665 - 1285664 - | dipeptide transport system permease protein TERM 1851 1286368 - 1286358 - G 81 -3.2 -5.57054 | AATAACGCAAAAAAA GCTA ATT CAGC GGTAGCAGGAAAAAG TERM 1852 1286715 - 1286684 - R 87 -11 -3.49653 | opp_overlap 1286689 1286712, overlap 1286689 ATCACTCGTAGATAA TAAAAGTGCGGTAA AAAT TCACCGCACTTTTC AAAGAAATTAATCGG TERM 1853 1286689 - 1286710 + r 85 -8.7 -4.08692 | opp_overlap 1286689 1286684 TCGTAGATAATAAAA GTGCGGTAA AAAT TCACCGCAC TTTTCAAAGAAATTA TERM 1854 1286710 - 1286689 - R 100 -10.9 -4.84311 | opp_overlap 1286689, overlap 1286684 TCGTAGATAATAAAA GTGCGGTAA AAAT TCACCGCAC TTTTCAAAGAAATTA uvrD 1288938 - 1286755 - | DNA-dependent helicase II NTHI1360 1290180 - 1289545 - | organic radical activating protein NTHI1361 1290606 - 1290181 - | 6-pyruvoyl tetrahydrobiopterin synthase NTHI1362 1291282 - 1290599 - | PP-loop superfamily ATPase NTHI1363 1291438 - 1291581 + | hypothetical protein TERM 1855 1291581 - 1291613 + T 95 -8.5 -5.1244 | opp_overlap 1291586, overlap 1291586 GGGATTGAATCAATA AAAAAGTGCGGTTGA TTT TTAACCGCACTTTCG TTTTTCTATTGGTAG TERM 1856 1291608 - 1291586 - T 100 -10.6 -5.5604 | opp_overlap 1291586 1291581 TGAATCAATAAAAAA GTGCGGTTGA TTT TTAACCGCAC TTTCGTTTTTCTATT TERM 1857 1291586 - 1291608 + T 100 -12.8 -4.41882 | opp_overlap 1291586, overlap 1291581 TGAATCAATAAAAAA GTGCGGTTGA TTT TTAACCGCAC TTTCGTTTTTCTATT ilvE 1292663 - 1291632 - | branched-chain amino acid aminotransferase TERM 1858 1292242 - 1292225 - G 76 -2.7 -5.4505 | CTGGGCAACAAAAAA CAGAG AAAATAAA CTCTG GTGCCGTTTTCACGC TERM 1859 1292865 - 1292845 - H 87 -6.8 -5.52384 | opp_overlap 1292845 TCGGGATGAAAAAAA CGCCACTC AATGA GAGCAGCG TTTAACCAAATCGGT TERM 1860 1292923 - 1292903 - H 93 -11.3 -3.99353 | opp_overlap 1292901 TATACAGGAAGTAAA TGAGTAACA AAT TGTTACTCA AGTTCGGTTTCCCGA TERM 1861 1292940 - 1292925 - H 71 -9 -3.07307 | opp_overlap 1292925 CAAATTGTTACTCAA GTTCGG TTTC CCGAAC TATATGCAAACACAA gcvA 1293138 - 1294031 + | DNA-binding transcriptional activator GcvA NTHI1366 1294024 - 1295115 + | putative RNA 2'-O-ribose methyltransferase TERM 1862 1296061 - 1296090 + G 76 -7.3 -4.31412 | opp_overlap 1296061 CTGAAGCGTTCAAAA TCATTTTAACCGA TCCT TCCGTTAAAGTGA TTTTAGTGAATATTT sucC 1295151 - 1296320 + | succinyl-CoA synthetase beta chain sucD 1296320 - 1297201 + | succinyl-CoA synthetase alpha chain TERM 1863 1297218 - 1297247 + F 73 -4.5 -5.00895 | gap 1, opp_overlap 1297202 1297222, overlap 1297205 1297221 1297222 CGCACTTTAGTTTTC TAAA-GCGTAGA TTGGCTT TCTACGCCTTTA TTTTTATATGCTCGC TERM 1864 1297686 - 1297667 - g 72 -5.8 -4.39287 | gap 1 TTAATGACATCAAAA CGTAAAACC ATT GGTTT-ACG CGTACCAGATAATAA NTHI1369 1297322 - 1297945 + | hypothetical protein rluB 1297993 - 1299066 + | ribosomal large subunit pseudouridine synthase B cysB 1299077 - 1300048 + | transcriptional regulator CysB TERM 1865 1300102 - 1300060 - T 85 -9.4 -4.02856 | overlap 1300064 ATAACAATGTATAAA TGAAGTGCGGTTGAAATT TAATAAG AATTTTAACCGCACTTGA AAGATTAAAACAGAT TERM 1866 1300098 - 1300064 - T 86 -10.2 -3.63059 | overlap 1300060 CAATGTATAAATGAA GTGCGGTTGAAATT TAATAAG AATTTTAACCGCAC TTGAAAGATTAAAAC NTHI1372 1301051 - 1300107 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 1867 1301391 - 1301405 + G 71 -6.4 -4.15222 | GAAATATTTACGTGA TGGGGA AGA TTCCCA TTTATTAAAACAACT NTHI1373 1301182 - 1301685 + | hypothetical protein TERM 1868 1301699 - 1301743 + T 83 -8 -4.29656 | opp_overlap 1301704, overlap 1301704 AAAAAAACGTTATAA AAAAATACCGCACTTTTACT GCCTA GGGCAAAGTGCGGTATTTTC TTTTACAATTTTGTA TERM 1869 1301704 - 1301738 + T 88 -7.9 -5.10163 | opp_overlap 1301704, overlap 1301699 AACGTTATAAAAAAA TACCGCACTTTTACT GCCTA GGGCAAAGTGCGGTA TTTTCTTTTACAATT TERM 1870 1301738 - 1301704 - T 93 -7.2 -5.63504 | opp_overlap 1301704 1301699 AACGTTATAAAAAAA TACCGCACTTTTAC TGCCTAG GGCAAAGTGCGGTA TTTTCTTTTACAATT pta 1303898 - 1301763 - | phosphate acetyltransferase TERM 1871 1303586 - 1303599 + g 81 -6.7 -4.9445 | TTAAACCTTCCACCA CAACG ATAT CGTTG TTTTTGGTTAATTGT TERM 1872 1303935 - 1303953 + r 100 -13.2 -4.4846 | opp_overlap 1303935 TGTTATAAATAAAAA CTGCCGAA AAA TTCGGCAG TTTGTTGTTGAATTA TERM 1873 1303953 - 1303935 - R 100 -13.2 -5.38054 | opp_overlap 1303935 TGTTATAAATAAAAA CTGCCGAA AAA TTCGGCAG TTTGTTGTTGAATTA ackA 1305171 - 1303966 - | acetate kinase TERM 1874 1305338 - 1305320 - H 81 -7.6 -4.32046 | overlap 1305315 TTTTGAAAAATTAAA CTATTTTT ACT AAAAATAG ACTTAAAATAGCGTA NTHI1376 1305388 - 1305831 + | hypothetical protein TERM 1875 1305877 - 1305895 + F 100 -11 -4.8622 | TTTTGTAGAATACCT CGGTCGTT TTA AACGGCCG TTTTTCATTGAGAGA cvpA 1305918 - 1306409 + | colicin V production protein purF 1306420 - 1307937 + | amidophosphoribosyltransferase TERM 1876 1307997 - 1307973 - T 95 -8.6 -4.84359 | opp_overlap 1307973 TTAGTCCGATAAAAA TCACCGCATT AAAAA AGTGCGGTGA TTTTTTATTTGTTTT TERM 1877 1307973 - 1307997 + T 100 -10.8 -5.88476 | opp_overlap 1307973 TTAGTCCGATAAAAA TCACCGCATT AAAAA AGTGCGGTGA TTTTTTATTTGTTTT sulA 1308892 - 1308002 - | cell division inhibitor SulA argR 1309347 - 1308892 - | arginine repressor mdh 1309554 - 1310489 + | malate dehydrogenase TERM 1878 1310507 - 1310523 + T 71 -3 -5.08601 | opp_overlap 1310498 GTTAAACAATAAGAA GGGAAT ATAAA ATTCTC TTTTTATTAAAATAA TERM 1879 1310538 - 1310563 + T 100 -10.5 -4.33576 | opp_overlap 1310543, overlap 1310543 CTTTTTATTAAAATA AAAAAGCCACC AAAT GGTGGCTTTTG TTTGTATCTTTATTA TERM 1880 1310558 - 1310543 - T 100 -10.4 -5.83211 | opp_overlap 1310543 1310538 TATTAAAATAAAAAA GCCACC AAAT GGTGGC TTTTGTTTGTATCTT TERM 1881 1310543 - 1310558 + T 100 -10.4 -5.08878 | opp_overlap 1310543, overlap 1310538 TATTAAAATAAAAAA GCCACC AAAT GGTGGC TTTTGTTTGTATCTT lysS 1312084 - 1310576 - | lysyl-tRNA synthetase prfB 1313047 - 1312196 - | peptide chain release factor 2 dsbC 1313427 - 1314116 + | thiol-disulfide interchange protein TERM 1882 1314130 - 1314157 + F 75 -8.4 -3.80858 | opp_overlap 1314132, overlap 1314132 1314135 AATTTTATAATGAAA AACAAGGGGCAG TTGC CTACCCCTTGTG TTTAGTCGGTTATGC TERM 1883 1314132 - 1314155 + F 87 -11 -3.48506 | opp_overlap 1314132, overlap 1314130 1314135 TTTTATAATGAAAAA CAAGGGGCAG TTGC CTACCCCTTG TGTTTAGTCGGTTAT TERM 1884 1314155 - 1314132 - f 100 -13.2 -4.93365 | opp_overlap 1314132 1314130 1314135 TTTTATAATGAAAAA CAAGGGGCAG TTGC CTACCCCTTG TGTTTAGTCGGTTAT TERM 1885 1314135 - 1314152 + F 70 -6.9 -3.86653 | opp_overlap 1314132, overlap 1314132 1314130 TATAATGAAAAACAA GGGGCAG TTGC CTACCCC TTGTGTTTAGTCGGT TERM 1886 1314334 - 1314278 - f 79 -9.9 -3.26947 | gap 3, overlap 1314279 1314323 CAATCGTTAGACTAA TGGTCAGT-AGGGCTTTTAACCCCTG TCAGCATT CAGG-GTTAAAAGCCCTGACCGAC-A GGAAAAAGTATAGAT TERM 1887 1314334 - 1314279 - f 82 -11.5 -2.55847 | overlap 1314278 1314323 AATCGTTAGACTAAT GGTCAGT-AGGGCTTTTAACCCCTG TCAGCATT CAGG-GTTAAAAGCCCTGACCGACA GGAAAAAGTATAGAT TERM 1888 1314375 - 1314354 - f 83 -7.3 -4.65494 | opp_overlap 1314356, overlap 1314356 AAAGTATAGATAAAA GAGCTGTTG ATTT CAACAGCTT TTTGCTTTTAGGTAT TERM 1889 1314373 - 1314356 - f 87 -9.9 -3.92276 | opp_overlap 1314356, overlap 1314354 AGTATAGATAAAAGA GCTGTTG ATTT CAACAGC TTTTTGCTTTTAGGT TERM 1890 1314356 - 1314373 + F 100 -9.9 -5.10154 | opp_overlap 1314356 1314354 AGTATAGATAAAAGA GCTGTTG ATTT CAACAGC TTTTTGCTTTTAGGT recJ 1314404 - 1316131 + | single-stranded-DNA-specific exonuclease RecJ NTHI1387 1316124 - 1316831 + | hypothetical protein mtnA 1316828 - 1317520 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 1891 1317557 - 1317577 + T 100 -14.1 -4.9725 | opp_overlap 1317552 1317557 AATGCTAAAATTGAA GGCATAGCT ATT AGCTATGCC TTTTTATATGAACCT TERM 1892 1317577 - 1317557 - T 100 -14.1 -3.37939 | opp_overlap 1317557, overlap 1317552 AATGCTAAAATTGAA GGCATAGCT ATT AGCTATGCC TTTTTATATGAACCT hup 1320341 - 1317594 - | heme utilization protein TERM 1893 1320631 - 1320599 - R 72 -2.8 -5.32599 | gap 1, opp_overlap 1320606 1320610, overlap 1320601 1320606 CATAAAAGAGAAAAA TAGGAAATGACCGCA AAAG TGCGGTCATTTT-TG GCGTAAATTTTATAG TERM 1894 1320630 - 1320601 - R 78 -7.9 -4.25747 | opp_overlap 1320606 1320610, overlap 1320599 1320606 TAAAAGAGAAAAATA GGAAATGACCGCA AAAG TGCGGTCATTTTT GGCGTAAATTTTATA TERM 1895 1320625 - 1320606 - R 100 -12.2 -4.16158 | opp_overlap 1320606 1320610, overlap 1320601 1320599 GAGAAAAATAGGAAA TGACCGCA AAAG TGCGGTCA TTTTTGGCGTAAATT TERM 1896 1320606 - 1320625 + r 100 -12.2 -4.63184 | opp_overlap 1320601 1320599 1320606, overlap 1320610 GAGAAAAATAGGAAA TGACCGCA AAAG TGCGGTCA TTTTTGGCGTAAATT NTHI1391 1322239 - 1320641 - | putative L-lactate permease TERM 1897 1322606 - 1322645 + r 78 -7.4 -4.1235 | opp_overlap 1322615, overlap 1322609 GGCTATGCTTTTTAT TGATAAAAATCTCCCC TTTTAATC GAGGAGATTTTTATTA TTCTTCTTTAAATTC TERM 1898 1322609 - 1322642 + r 75 -6.9 -4.16033 | opp_overlap 1322615, overlap 1322606 TATGCTTTTTATTGA TAAAAATCTCCCC TTTTAATC GAGGAGATTTTTA TTATTCTTCTTTAAA TERM 1899 1322636 - 1322615 - R 70 -3.7 -4.87665 | opp_overlap 1322609 1322606 TTTTATTGATAAAAA TCTCCCC TTTTAATC GAGGAGA TTTTTATTATTCTTC fbp 1323647 - 1322643 - | fructose-1,6-bisphosphatase TERM 1900 1322943 - 1322954 + g 72 -5.8 -4.39954 | GCGAGATACGTAAGG GCGA TGAG TCGC TTTATCTTCTTCTTG truA 1323882 - 1324691 + | tRNA pseudouridine synthase A TERM 1901 1324744 - 1324770 + T 74 -9.4 -3.11966 | opp_overlap 1324746, overlap 1324742 1324735 1324734 TATTCTTCATAAAAA AAGACCGCACTT TAA AAGTGCGGTCAA TCTTAAGTGAGTTTT TERM 1902 1324768 - 1324746 - T 100 -16.4 -5.60993 | opp_overlap 1324744 1324742 1324735 1324734 TTCTTCATAAAAAAA GACCGCACTT TAA AAGTGCGGTC AATCTTAAGTGAGTT sapZ 1325800 - 1324784 - | hypothetical protein sapF 1326621 - 1325812 - | anti peptide resistance ABC transporter ATPase sapD 1327670 - 1326621 - | peptide ABC transporter ATP-binding protein TERM 1903 1326668 - 1326678 + g 83 -4 -5.67063 | GGGTGGCGGTTGTTT TTTC TTT GAAA TTTTTTTCTCGTAAA sapC 1328561 - 1327674 - | ABC transporter permease sapB 1329516 - 1328551 - | ABC transporter permease TERM 1904 1328888 - 1328876 - G 74 -4.9 -4.85599 | opp_overlap 1328876 1328874 GCTACTTTAGAAAAA TTTTG ATT CAAAA TATATTCTGCTCGTT TERM 1905 1329368 - 1329350 - G 73 -7.4 -4.19953 | overlap 1329351 TAGGTAATGCCAAAA TCACCTTG TAA CAAGGTGC CTAAATAATGGAAAT TERM 1906 1329367 - 1329351 - G 80 -10.9 -3.1149 | overlap 1329350 AGGTAATGCCAAAAT CACCTTG TAA CAAGGTG CCTAAATAATGGAAA sapA 1331210 - 1329516 - | anti peptide resistance ABC transporter periplasmic protein TERM 1907 1330993 - 1331017 + g 70 -5.9 -4.20516 | GTTGCACTGTGATTT TTTATATCAAA TAA TTTGTTATAAA TTTGTTCCGTGACCA TERM 1908 1332054 - 1332028 - g 83 -5.3 -5.43866 | opp_overlap 1332030 GAACCTTGAAAAAAA CAGCAAAAT CAAATAGCT ATTTTGCTG TGCTGACAAAACGTT NTHI1402 1331280 - 1332692 + | ATPase TERM 1909 1332715 - 1332696 - T 100 -12.2 -5.08601 | opp_overlap 1332696 CGATTTGAATAAAAA GTGCGGAA AATT TTCCGCAC TTTTTTCATCTTTCT TERM 1910 1332696 - 1332715 + T 100 -12.2 -5.34055 | opp_overlap 1332696 CGATTTGAATAAAAA GTGCGGAA AATT TTCCGCAC TTTTTTCATCTTTCT ppc 1335368 - 1332729 - | phosphoenolpyruvate carboxylase TERM 1911 1333715 - 1333684 - G 78 -10.9 -2.54732 | overlap 1333683 GTTAAATTTACTAAG GCTTCTTGCGCAC GGTATT GCGCCCAAGAAGC AGCCATCATTCCCGC TERM 1912 1335497 - 1335538 + r 80 -6.8 -4.78764 | gap 1, opp_overlap 1335499 1335502, overlap 1335500 1335502 AAAAAATAGCTAAAA AAGAACCGCACTTTTTAGG GATTA TTTAAAAAGTGCGG-TCTA TTTTTGCTAAGTTTA TERM 1913 1335536 - 1335499 - R 90 -8 -5.19916 | gap 1, opp_overlap 1335497 1335500 1335502, overlap 1335502 AAAATAGCTAAAAAA GAACCGCACTTTTTA GGGATTATT TAAAAAGTGCGG-TC TATTTTTGCTAAGTT TERM 1914 1335500 - 1335536 + r 87 -9.6 -3.9993 | opp_overlap 1335499 1335502, overlap 1335497 1335502 AAATAGCTAAAAAAG AACCGCACTTTTTAGG GATTA TTTAAAAAGTGCGGTC TATTTTTGCTAAGTT TERM 1915 1335502 - 1335534 + r 91 -12.2 -3.57901 | opp_overlap 1335502 1335499, overlap 1335500 1335497 ATAGCTAAAAAAGAA CCGCACTTTTTAGG GATTA TTTAAAAAGTGCGG TCTATTTTTGCTAAG TERM 1916 1335534 - 1335502 - R 100 -10.8 -4.65666 | opp_overlap 1335500 1335497 1335502, overlap 1335499 ATAGCTAAAAAAGAA CCGCACTTTTTA GGGATTATT TAAAAAGTGCGG TCTATTTTTGCTAAG purR 1336561 - 1335551 - | DNA-binding transcriptional repressor PurR TERM 1917 1336810 - 1336842 + H 100 -10.8 -5.85178 | gap 1 ATCAACTTTTTATTA TCACCGCAGTTTTGT TTCT ACAAAG-TGCGGTGA TTTTTTTTCGGTGTT dapD 1336924 - 1337751 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 1918 1337791 - 1337769 - T 100 -16.4 -5.9667 | AAAAATATAAAAAAA GACCGCACTT TTA AAGTGCGGTC TGAAAATCAAAAGAA purA 1339106 - 1337808 - | adenylosuccinate synthetase TERM 1919 1339199 - 1339220 + r 90 -10.9 -3.87583 | opp_overlap 1339199, overlap 1339193 GATATAAAAGAAAAA GTGTGGTGA TTTT TCACCGCAC TTTAGGTTTAAATTT TERM 1920 1339220 - 1339199 - R 95 -8.7 -5.58522 | opp_overlap 1339193 1339199 GATATAAAAGAAAAA GTGTGGTGA TTTT TCACCGCAC TTTAGGTTTAAATTT NTHI1408 1339600 - 1339235 - | aspartokinase TERM 1921 1339838 - 1339816 - R 75 -5 -4.93454 | opp_overlap 1339817, overlap 1339817 CAAACAAACATAAAA TTACTTTTTT TGT AAAAAAGTAT TTGACGAGGATCATC TERM 1922 1339837 - 1339817 - R 77 -8.5 -3.53632 | opp_overlap 1339817, overlap 1339816 AAACAAACATAAAAT TACTTTTTT TGT AAAAAAGTA TTTGACGAGGATCAT TERM 1923 1339817 - 1339837 + r 77 -8.5 -3.5393 | opp_overlap 1339817 1339816 AAACAAACATAAAAT TACTTTTTT TGT AAAAAAGTA TTTGACGAGGATCAT TERM 1924 1340421 - 1340402 - R 87 -6.5 -5.56673 | opp_overlap 1340402 ACTCAGAACAAAAAA GCTAAGA TTGATC TCTTAGC TTTTTTACTTTGTTC TERM 1925 1340402 - 1340421 + r 87 -6.5 -5.46129 | opp_overlap 1340402 ACTCAGAACAAAAAA GCTAAGA TTGATC TCTTAGC TTTTTTACTTTGTTC rplY 1340735 - 1340448 - | 50S ribosomal protein L25 TERM 1926 1340798 - 1340771 - H 100 -9.2 -4.69559 | overlap 1340776 1340794 AAATGTTAAAAGAAA GAAAATCGCAGG CGAC CCAGCAATTTTC CTAAAAACCGCTCAA TERM 1927 1340793 - 1340776 - H 74 -3.3 -5.26247 | overlap 1340771 TTAAAAGAAAGAAAA TCGCAGG CGAC CCAGCAA TTTTCCTAAAAACCG NTHI1412 1340903 - 1341559 + | uncharacterized membrane-associated protein TERM 1928 1341569 - 1341602 + T 73 -3.9 -5.17786 | opp_overlap 1341572, overlap 1341570 1341571 CAATAATAGAATAAT AAACGGCTAAAAATA TTTC TATTTTTAGCCGCAC TTTTTAATTTTCTTC TERM 1929 1341570 - 1341601 + T 71 -7.4 -3.68231 | opp_overlap 1341572, overlap 1341569 1341571 AATAATAGAATAATA AACGGCTAAAAATA TTTC TATTTTTAGCCGCA CTTTTTAATTTTCTT TERM 1930 1341571 - 1341600 + T 81 -10.9 -2.78499 | opp_overlap 1341572, overlap 1341570 1341569 ATAATAGAATAATAA ACGGCTAAAAATA TTTC TATTTTTAGCCGC ACTTTTTAATTTTCT TERM 1931 1341599 - 1341572 - T 100 -14.4 -4.57503 | opp_overlap 1341571 1341570 1341569 TAATAGAATAATAAA CGGCTAAAAATA TTTC TATTTTTAGCCG CACTTTTTAATTTTC NTHI1413 1342022 - 1341606 - | hypothetical protein NTHI1414 1342403 - 1342053 - | YjgF family translation initiation inhibitor TERM 1932 1342556 - 1342567 + G 80 -5.8 -5.03227 | CGGTGCTATTGTTAT GGCA CTAC TGCC TTTTATTTATGGTAT NTHI1415 1342515 - 1343231 + | hypothetical protein NTHI1416 1343232 - 1343774 + | hypothetical protein NTHI1417 1344247 - 1343789 - | HTH-type transcriptional regulator TERM 1933 1344524 - 1344538 + G 74 -5.8 -4.5287 | AAGCCTATCTTATGC CTAAAT CAG ATTTAG TTTTCGTTCATTTCG NTHI1418 1344286 - 1344969 + | putative ABC-type Co2+ transport system, periplasmic component TERM 1934 1345057 - 1345084 + G 100 -14.3 -3.87075 | GCCCACGCGCTTTAT GTGTTTGCCCA ATATGA TGGGCAAACAC TTTCTGGCAAATCCT NTHI1419 1344982 - 1345470 + | hypothetical protein TERM 1935 1345483 - 1345503 + G 77 -6.1 -4.69053 | overlap 1345485 TAATGCATTTATCTG AAGGCGTGT TAC ATACGCCTA TTTTATTAGCTGGTG TERM 1936 1345485 - 1345501 + G 79 -8.7 -3.95554 | overlap 1345483 ATGCATTTATCTGAA GGCGTGT TAC ATACGCC TATTTTATTAGCTGG TERM 1937 1345902 - 1345921 + G 75 -6.4 -4.50583 | overlap 1345895 GTAATTGGCGTTGGC GGAGCAGG CGTG CTTGCTTC TTTTGTGCTGATGTT cbiM 1345470 - 1346090 + | cobalt transport protein CbiM TERM 1938 1346667 - 1346657 - g 82 -8.2 -4.2558 | CATGCCCTATTAAAA GCCG AAA CGGC GCAAATGGCGTTAAA NTHI1421 1346090 - 1346722 + | cobalt ABC transporter permease cbiO 1346724 - 1347350 + | cobalt ABC transporter ATPase TERM 1939 1347417 - 1347381 - T 90 -11.1 -3.84246 | opp_overlap 1347387, overlap 1347386 1347387 TTGTTAATGATTAAA TAAAATTAAAGCCTTGA TAA TCAAGGCTTTATTTTTT ACTTACAATATTTTA TERM 1940 1347412 - 1347386 - T 100 -11 -4.96388 | opp_overlap 1347387, overlap 1347381 1347387 AATGATTAAATAAAA TTAAAGCCTTGA TAA TCAAGGCTTTAT TTTTTACTTACAATA TERM 1941 1347387 - 1347411 + T 100 -14.5 -5.27477 | opp_overlap 1347387 1347386 1347381 ATGATTAAATAAAAT TAAAGCCTTGA TAA TCAAGGCTTTA TTTTTTACTTACAAT TERM 1942 1347411 - 1347387 - T 100 -14.5 -3.56206 | opp_overlap 1347387, overlap 1347386 1347381 ATGATTAAATAAAAT TAAAGCCTTGA TAA TCAAGGCTTTA TTTTTTACTTACAAT aspC 1348647 - 1347457 - | aromatic amino acid aminotransferase purK 1349875 - 1348787 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 1943 1349929 - 1349905 - R 100 -11.5 -5.54894 | overlap 1349908 AATTTACGAAAAAAA CAACCGCACTT TAA AAGTGCGGTCA GATCTGAAGATATTT TERM 1944 1349926 - 1349908 - R 100 -13.2 -4.8487 | overlap 1349905 TTACGAAAAAAACAA CCGCACTT TAA AAGTGCGG TCAGATCTGAAGATA purE 1350439 - 1349945 - | phosphoribosylaminoimidazole carboxylase catalytic subunit hicA 1350610 - 1350858 + | HicA TERM 1945 1351184 - 1351171 - g 76 -2.5 -5.4833 | overlap 1351164 1351159 CGATTCAAGAAAAAA TTTTT CGTG AAAAA CCAAGTTTAAGATAA hicB 1350855 - 1351199 + | HicB TERM 1946 1352000 - 1352012 + G 71 -3.3 -5.1287 | opp_overlap 1352000 TAGATATTTATATGA TCGTC GCT GTCGA TTTTTTCAATATGGG pepN 1351243 - 1353852 + | aminopeptidase N TERM 1947 1353864 - 1353892 + T 78 -7.6 -4.26953 | GTAACACTTGATGAT GTGAGAATAG GTTTTATGA CTATTCTCAC TTTATTCAATTGCTT ribE 1354538 - 1353924 - | riboflavin synthase subunit alpha norM 1354582 - 1355976 + | multidrug efflux protein sfsA 1355985 - 1356701 + | sugar fermentation stimulation protein A TERM 1948 1356807 - 1356830 + F 100 -9.7 -6.09888 | TCACTCCAACATTCC CGCCTATTT CCCCAC AAATAGGCG TTTTTTTTATTCACA tyrS 1356901 - 1358088 + | tyrosyl-tRNA synthetase TERM 1949 1358131 - 1358103 - T 100 -11.9 -5.82281 | opp_overlap 1358103 AAATAGATAAAAAAA TACCGCACTTT GGCAATA AAAGTGCGGTA TTTTTTATTGAAATT TERM 1950 1358103 - 1358131 + T 100 -11.9 -5.4756 | opp_overlap 1358103 AAATAGATAAAAAAA TACCGCACTTT GGCAATA AAAGTGCGGTA TTTTTTATTGAAATT prsA 1359099 - 1358152 - | ribose-phosphate pyrophosphokinase TERM 1951 1358234 - 1358223 - G 70 -5.8 -4.21974 | opp_overlap 1358233 CCAGCATGGAAGAAA GCGT AAGC ACGC GAACTTTACCGATCG ispE 1360054 - 1359101 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 1360683 - 1360054 - | outer membrane lipoprotein LolB cca 1361996 - 1360746 - | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase NTHI1437 1362614 - 1362003 - | hypothetical protein TERM 1952 1362672 - 1362634 - R 89 -13.5 -2.84325 | gap 1, opp_overlap 1362642, overlap 1362637 1362642 TCCCCTTAAACATCA CAAC-AAAAGTGCGGTTA AAAT TAACCGCACTTTTTATTG AGATCAATTAATTAA TERM 1953 1362668 - 1362637 - R 95 -13.2 -3.56837 | opp_overlap 1362642, overlap 1362634 1362642 CCTTAAACATCACAA CAAAAGTGCGGTTA AAAT TAACCGCACTTTTT ATTGAGATCAATTAA TERM 1954 1362642 - 1362663 + r 100 -13.1 -5.08601 | opp_overlap 1362637 1362634 1362642 AACATCACAACAAAA GTGCGGTTA AAAT TAACCGCAC TTTTTATTGAGATCA TERM 1955 1362663 - 1362642 - R 100 -13.1 -4.83722 | opp_overlap 1362642, overlap 1362637 1362634 AACATCACAACAAAA GTGCGGTTA AAAT TAACCGCAC TTTTTATTGAGATCA NTHI1438 1363942 - 1362680 - | putative phosphate permease TERM 1956 1363187 - 1363201 + g 79 -7.1 -4.53349 | GAAGACTTTTTCTAC GGCAC CAAAA GTGCC TTTGTTTGCTGATTG TERM 1957 1363914 - 1363892 - G 79 -8.4 -4.08285 | CATAAAAAAGCCAAA GGCTGCTGTG ATC CACACCAACC AAGAACCATATTGAC NTHI1439 1364647 - 1363967 - | phosphate transport regulator TERM 1958 1364573 - 1364587 + g 72 -5 -4.84017 | ATCGCTACATTCGGT CACTTT TTC AGAGTG TTTTTGTAACGGCTT TERM 1959 1364889 - 1364911 + G 78 -3.4 -5.4833 | overlap 1364881 AAAGTATCGGCAGTG GCGTAAGTTT ATT GATTTTACGC TTTTTTCTTGCGTGG NTHI1440 1364855 - 1365310 + | hypothetical protein NTHI1441 1365349 - 1365636 + | hypothetical protein TERM 1960 1365650 - 1365673 + F 100 -11.8 -4.63218 | opp_overlap 1365649 1365647 AAGAATAATAATTAT GCTGGCGTAA CAAT TTATGCCAGC TTTTATTAAAAAGGA NTHI1443 1365666 - 1366619 + | hypothetical protein TERM 1961 1366868 - 1366884 + G 78 -7.3 -4.36914 | opp_overlap 1366876, overlap 1366878 ATTTCCAAGATATTG CAGGAGA ATT TCTCTTG TTTTGTCAAGAAAAA NTHI1444 1366609 - 1367325 + | hypothetical protein TERM 1962 1367341 - 1367378 + F 100 -15.3 -4.43911 | opp_overlap 1367338 1367348 AATTTTTGAAAATGC TGAGTAAGATGAAAATA TTCA TATTTTCATCTTACTTA TTTTAATTGACATTT TERM 1963 1367371 - 1367348 - f 79 -9.8 -3.18429 | opp_overlap 1367341, overlap 1367338 GAAAATGCTGAGTAA GATGAAAATA TTCA TATTTTCATC TTACTTATTTTAATT TERM 1964 1367678 - 1367704 + F 73 -4.4 -4.88293 | opp_overlap 1367678 TAGATAAAAAGAAAA CCTAGAGACTTT TTT ACAGTTACTAGG TTTATTTTTAGGATT TERM 1965 1367704 - 1367678 - f 70 -2.2 -5.38839 | opp_overlap 1367678 TAGATAAAAAGAAAA CCTAGAGACTTT TTT ACAGTTACTAGG TTTATTTTTAGGATT TERM 1966 1368504 - 1368487 - g 75 -7.7 -4.08216 | gap 1, opp_overlap 1368487 GTACTTTTCTTAAAA GCG-TGGC TAA GCCAACGC TATACTAAAACTGAA NTHI1445 1368433 - 1368600 + | hypothetical protein NTHI1446 1368998 - 1369114 + | hypothetical protein TERM 1967 1369187 - 1369169 - T 78 -7.4 -4.14598 | GCCAAGGAAATTAAA TTTGCCAC ACT GTGGCATA AATAAGCTAATGAAT NTHI1447 1369728 - 1369564 - | hypothetical protein TERM 1968 1369792 - 1369773 - R 74 -9.3 -3.04517 | opp_overlap 1369773, overlap 1369772 AGTTTTGGCTAAAAT CTCTGCC ATAAAA GGCAGAG TTTTACGGCGGGAGG TERM 1969 1369773 - 1369792 + r 85 -9.3 -4.07568 | opp_overlap 1369773 1369772 AGTTTTGGCTAAAAT CTCTGCC ATAAAA GGCAGAG TTTTACGGCGGGAGG TERM 1970 1369849 - 1369899 + r 80 -7.1 -4.54727 | gap 1 GTTATAAATATAAAA GTGCGGTTGATTTTT-GAGAGTTT TTTA AAACGCTTTGAAAATTGGCCGCAC TTTTACTTTAAGAAA hmw2C 1371870 - 1369918 - | HMW2C, putative glycosyltransferase involved in glycosylation of HMW1A and HMW2A TERM 1971 1372244 - 1372222 - R 95 -12 -3.96531 | opp_overlap 1372214 1372222 GCATATAGTTATAAA CTGGTAGGCG GAA CGCTTACCAG TTGATTAAATTTCAG TERM 1972 1372222 - 1372244 + r 100 -14.2 -3.43217 | opp_overlap 1372222, overlap 1372214 GCATATAGTTATAAA CTGGTAGGCG GAA CGCTTACCAG TTGATTAAATTTCAG hmw2B 1373899 - 1372262 - | HMW2B, OMP-85-like protein required for HMW1A and HMW2A secretion TERM 1973 1373663 - 1373691 + g 91 -9.6 -4.86939 | opp_overlap 1373670, overlap 1373665 TGGCTCAATTTTATC TAGCACAGCCTG TAATT CAAGCTGTGCTG TTTTTAGGTTTGTTA TERM 1974 1373665 - 1373689 + g 83 -10 -4.03043 | opp_overlap 1373670, overlap 1373663 GCTCAATTTTATCTA GCACAGCCTG TAATT CAAGCTGTGC TGTTTTTAGGTTTGT TERM 1975 1373984 - 1373952 - R 72 -9.2 -2.58579 | overlap 1373951 GTAATTTTTTACAAG GTGGGTGAAAGCCC GTACT GAACTTTAACCCAC ACAGTAAATAATACG hmw2A 1378678 - 1374050 - | HMW2A, high molecular weight adhesin 2 TERM 1976 1375407 - 1375432 + g 76 -4.9 -5.10029 | gap 1, opp_overlap 1375400, overlap 1375400 1375410 1375411 TTAGCAGAGATTTTT G-AATCTTTAAC CTG GTTAAAGGTTAC TTTTTTGGCATTAGT TERM 1977 1375458 - 1375476 + g 78 -10.4 -3.07935 | TTAGTACCATCAGCA CTATTGGT GTT ACCAATAG TTAAATCACTACCAT TERM 1978 1375773 - 1375785 + g 83 -4.1 -5.62552 | TTGTTGGTTATATTT CCGTT AAT AATGG TTTTTTGATTTTTTT TERM 1979 1377552 - 1377567 + g 71 -4 -4.96388 | ACATTAATTGTTGAG CCTTTT TCTA AAGAGG TTTTCTTTGCTAATT TERM 1980 1379141 - 1379128 - g 70 -8.1 -3.27278 | overlap 1379127 AAATTGAATTAAAAT TGGCG ATTT CGCCA CAAATAGGTATTGAA NTHI1451 1379103 - 1380149 + | hypothetical protein TERM 1981 1380285 - 1380301 + F 82 -8.7 -3.92324 | overlap 1380286 AGGCTAATCTCAGTG TTACCCC GTT GGGGTAG TTTGATGTTCCCCAG TERM 1982 1380286 - 1380300 + F 76 -10 -2.95073 | overlap 1380285 GGCTAATCTCAGTGT TACCCC GTT GGGGTA GTTTGATGTTCCCCA TERM 1983 1380364 - 1380343 - f 79 -8.7 -3.73525 | overlap 1380339 ATAAACATAAATTAA CTGTGGGTA TACT TACCCACGG CAAATACGGAGAATG TERM 1984 1381005 - 1381018 + G 77 -8.1 -3.8917 | opp_overlap 1381004 1381005 TCGTTATGCGAAAAC TCGCC AAGT GGCGA TTATTATGGTTGGAC radA 1380382 - 1381758 + | DNA repair protein RadA TERM 1985 1381869 - 1381859 - g 74 -5.4 -4.73341 | AAAAAACGAAATAAA GCAT TGG ATGC GATAGATATAAAAAT lrp 1381838 - 1382317 + | leucine-responsive transcriptional regulator TERM 1986 1382613 - 1382601 - g 71 -3.3 -5.10933 | opp_overlap 1382601 TTATTGAAAACAAAA GCAGT TAA ACAGC TTTCCTGTACTCGAA TERM 1987 1383069 - 1383058 - g 70 -5.8 -4.34488 | TAGAGGCAGAAGAAA GCTC AGTT GAGC AACCTTCGCATTTAA TERM 1988 1383996 - 1383973 - g 70 -8.3 -3.22521 | opp_overlap 1383972 1383970 1383973, overlap 1383968 GTGATAGCAAGGCAA CTTTACCTA TTGCTT TAGGTAAAG ATATTAGTGGTAAAC TERM 1989 1384686 - 1384674 - g 72 -9.1 -3.29461 | CAAGGGGGTGCAGAA GCCCT TTT AGGGC GTGGAGATATGCTTT ftsK 1382319 - 1385075 + | DNA translocase FtsK lolA 1385093 - 1385710 + | outer-membrane lipoprotein carrier protein TERM 1990 1385748 - 1385731 - f 93 -11.3 -3.94634 | opp_overlap 1385727 1385731 GATTATTTTAAATAA GGGCGTA GAAA TACGCCC TTCAATTTTGTGAGA TERM 1991 1385731 - 1385748 + F 89 -11.3 -3.41587 | opp_overlap 1385731, overlap 1385727 GATTATTTTAAATAA GGGCGTA GAAA TACGCCC TTCAATTTTGTGAGA NTHI1458 1385771 - 1387111 + | recombination factor protein RarA TERM 1992 1387146 - 1387185 + T 100 -16.8 -3.78067 | opp_overlap 1387146 TAGAATGGAATGAAA GTGCGGTTAATTTTAAAA ACCT TTTTGAAATTGACCGCAC TTTGGGTTGCCTGTT TERM 1993 1387185 - 1387146 - T 100 -12.4 -3.97057 | opp_overlap 1387146 TAGAATGGAATGAAA GTGCGGTTAATTTTAAAA ACCT TTTTGAAATTGACCGCAC TTTGGGTTGCCTGTT NTHI1459 1388341 - 1387199 - | hypothetical protein NTHI1460 1389574 - 1388351 - | modification methylase BepI-like TERM 1994 1389780 - 1389819 + r 100 -14.6 -5.40004 | opp_overlap 1389780 CTATTGATATACAAA GTGCGGTTAATTTTGAAA ACTT TTTTGAAATTGACCGCAC TTTTTTAATTTAATC TERM 1995 1389819 - 1389780 - R 81 -8 -4.1399 | opp_overlap 1389780 CTATTGATATACAAA GTGCGGTTAATTTTGAAA ACTT TTTTGAAATTGACCGCAC TTTTTTAATTTAATC aroA 1391127 - 1389829 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1996 1390401 - 1390372 - G 71 -6.5 -4.16842 | gap 1, opp_overlap 1390378 GCCAGCTGCAAGAAA GTAAGAGGCTGATG ATG CATC-GCCTTCTAC CAAGTATTTATTAGG purU 1391963 - 1391127 - | formyltetrahydrofolate deformylase TERM 1997 1392016 - 1391994 - R 100 -10 -5.71712 | opp_overlap 1391993 1391994 1391996 GTTTAGATAAAAAAA TAGAACCCAT AAA ATAGGTTCTA GTTTCAAATAGAAAA hns 1392437 - 1392033 - | DNA-binding protein H-NS-like protein TERM 1998 1392160 - 1392170 + g 73 -6.8 -4.28361 | overlap 1392162 GCATATTTTGCAGGG CGTG GAG CACG TTTTGCTCGAATTGA TERM 1999 1392510 - 1392500 - H 72 -2.6 -5.24647 | opp_overlap 1392500 1392502, overlap 1392502 ATAGAGAAAATAAAA TTTA TTG TAAA TATCTATTATTAAAT TERM 2000 1393512 - 1393527 + G 75 -3.2 -5.26918 | overlap 1393514 CTTCTATGCAATTTT CTCCAT TATT ATGGTG TTTTTTGTGGCATAT NTHI1465 1392841 - 1394400 + | Na+/H+ antiporter TERM 2001 1394459 - 1394475 + F 100 -8.7 -6.23317 | opp_overlap 1394459 TACTATTTTATAAAA TGCGGCA TTT TGTCGCA TTTTTTTATTTTTAT TERM 2002 1394475 - 1394459 - f 74 -6.5 -4.40804 | opp_overlap 1394459 TACTATTTTATAAAA TGCGGCA TTT TGTCGCA TTTTTTTATTTTTAT NTHI1466 1394468 - 1394617 + | hypothetical protein ilvI 1394667 - 1396388 + | acetolactate synthase 3 catalytic subunit ilvH 1396388 - 1396879 + | acetolactate synthase 3 regulatory subunit TERM 2003 1396894 - 1396926 + T 85 -8.5 -4.17556 | opp_overlap 1396894 AAGTAGGGGCGTAAA GTGCGGAAATATTTT AAT AGAATTTTACCGCAC TTTATTAGAAATATA TERM 2004 1396986 - 1396969 - T 85 -4.2 -5.60993 | TTTTTTATAAAAAAA TTGTGA CCAAGT TCACAA ATCTAAAAATATGTA TERM 2005 1397091 - 1397107 + T 100 -13.7 -5.8187 | TTTGCTTTCCGAGTA GTGCCCC AAT GGGGCAC TTTTTTTATTCAGTA TERM 2006 1397133 - 1397162 + T 81 -10.9 -2.72739 | opp_overlap 1397138, overlap 1397138 CAGTAAACAAGTATA AAAAATCCCTTTC CTGA GAAAGGGATTTTA ATTATCTAAATTACA TERM 2007 1397157 - 1397138 - T 100 -10.8 -5.4111 | opp_overlap 1397133 1397138 AACAAGTATAAAAAA TCCCTTTC CTGA GAAAGGGA TTTTAATTATCTAAA TERM 2008 1397138 - 1397157 + T 100 -10.8 -4.53034 | opp_overlap 1397138, overlap 1397133 AACAAGTATAAAAAA TCCCTTTC CTGA GAAAGGGA TTTTAATTATCTAAA argS 1398906 - 1397173 - | arginyl-tRNA synthetase TERM 2009 1397390 - 1397410 + g 70 -8.3 -3.34192 | opp_overlap 1397409, overlap 1397406 1397409 CCGACAGTTTGCACG GCTTCTTCA AAT TGTAGAAGC TTGATTGCAAGCGTT TERM 2010 1397406 - 1397426 + g 70 -4.8 -4.61852 | gap 1, opp_overlap 1397409, overlap 1397390 1397409 CTTCTTCAAATTGTA GAA-GCTTG ATTG CAAGCGTTC TTTCTTTATCATCTT NTHI1471 1398986 - 1399555 + | hypothetical protein NTHI1472 1399634 - 1399855 + | lipoprotein pcp 1399878 - 1400342 + | Outer membrane lipoprotein PCP precursor TERM 2011 1400372 - 1400399 + T 100 -12.9 -5.37345 | opp_overlap 1400357 1400372 GTCTAATATGATTAA TCAGTGCCTTA ACTTAG TAAGGCACTGA TTTTTTATAATTAAA TERM 2012 1400399 - 1400372 - T 91 -12.9 -3.27923 | opp_overlap 1400372, overlap 1400357 GTCTAATATGATTAA TCAGTGCCTTA ACTTAG TAAGGCACTGA TTTTTTATAATTAAA TERM 2013 1400481 - 1400460 - T 93 -10.3 -3.93009 | opp_overlap 1400479, overlap 1400454 1400475 TAAGATAAATTTAAA GGACTAAAT TAGA ATTTAGTCC TAGACAAACTTGGAA lgtD 1401497 - 1400526 - | UDP-GlcNAc--lipooligosaccharide N-acetylglucosamine glycosyltransferase TERM 2014 1401320 - 1401334 + g 70 -5.8 -4.33417 | TAATTTTTATCCTTT TATCTA ATT TAGATA TTTCTTCTAAATGAG pgi 1403784 - 1402135 - | glucose-6-phosphate isomerase TERM 2015 1403666 - 1403677 + g 100 -4.4 -6.01369 | opp_overlap 1403666 AATGTTAAAGAATAA TCGT CAAA ACGA TTTTTTTCTTGTTTA alr 1404963 - 1403881 - | alanine racemase dnaB 1406487 - 1404973 - | replicative DNA helicase TERM 2016 1406465 - 1406497 + g 76 -7.2 -4.21827 | gap 1, opp_overlap 1406472, overlap 1406469 1406471 1406472 GGTGAAAAAAGGAAA TAAAAAA-CGGTGGA AAAA TCCACCGCTCTTTTA TTTTAACATATTTAG TERM 2017 1406469 - 1406492 + g 76 -5.2 -5.09259 | opp_overlap 1406472, overlap 1406465 1406471 1406472 AAAAAAGGAAATAAA AAACGGTGGA AAAA TCCACCGCTC TTTTATTTTAACATA TERM 2018 1406471 - 1406490 + g 75 -7.8 -4.16397 | opp_overlap 1406472, overlap 1406469 1406465 1406472 AAAAGGAAATAAAAA ACGGTGGA AAAA TCCACCGC TCTTTTATTTTAACA TERM 2019 1406472 - 1406489 + g 80 -11.3 -3.08754 | opp_overlap 1406472, overlap 1406471 1406469 1406465 AAAGGAAATAAAAAA CGGTGGA AAAA TCCACCG CTCTTTTATTTTAAC TERM 2020 1406489 - 1406472 - G 100 -11.3 -5.74086 | opp_overlap 1406472 1406471 1406469 1406465 AAAGGAAATAAAAAA CGGTGGA AAAA TCCACCG CTCTTTTATTTTAAC pykA 1407957 - 1406521 - | pyruvate kinase TERM 2021 1409611 - 1409623 + G 79 -7.7 -4.32048 | GTGAGATTATTGAGG TGTGC TTG GCACA TTTTGAATATTCTTC NTHI1480 1408494 - 1409753 + | prophage CP4-57-like integrase TERM 2022 1409968 - 1409983 + T 90 -11.8 -3.36175 | opp_overlap 1409968, overlap 1409959 TTCCTCCAATAAAAA CCGCCC TTAT GGGCGG TTATAACGGTTTATT TERM 2023 1409983 - 1409968 - T 100 -11.8 -5.06414 | opp_overlap 1409968 1409959 TTCCTCCAATAAAAA CCGCCC TTAT GGGCGG TTATAACGGTTTATT NTHI1482 1410636 - 1410367 - | hypothetical protein NTHI1483 1410911 - 1410741 - | hypothetical protein NTHI1484 1411434 - 1410901 - | hypothetical protein NTHI1485 1411922 - 1411506 - | hypothetical protein NTHI1486 1412603 - 1411926 - | hypothetical protein TERM 2024 1412618 - 1412590 - G 82 -9.6 -4.07568 | opp_overlap 1412590 1412589 1412595, overlap 1412595 TTCTTTCTCCTAAAA CAAAAGGCGCTC ACTTG GAACGCCTATTG GATTTATTTGTTTAA TERM 2025 1412613 - 1412595 - G 91 -8.1 -5.07652 | opp_overlap 1412590 1412589 1412595, overlap 1412590 TCTCCTAAAACAAAA GGCGCTC ACTTG GAACGCC TATTGGATTTATTTG NTHI1487 1413785 - 1412622 - | modification methylase Bsp6I-like rdgC 1415287 - 1414391 - | recombination associated protein TERM 2026 1415331 - 1415313 - R 100 -10.3 -5.38054 | opp_overlap 1415311 CCTCATAAATAAAAA GCCGCTA ATTAA TAGCGGC AGATTTTAAGCATCA NTHI1489 1416758 - 1415412 - | hypothetical protein TERM 2027 1416503 - 1416514 + g 73 -4.4 -5.00895 | overlap 1416504 TTTCGATCGTGATTT TTGC AGAT GCAA TTTTTGTATCATCAC TERM 2028 1416789 - 1416807 + r 75 -8.9 -3.47573 | opp_overlap 1416789 TTAGATAATAAAAAA GCCACTA TTGGT TAGTGGC TTGTGGTGTAACTCA TERM 2029 1416807 - 1416789 - R 95 -8.9 -5.60689 | opp_overlap 1416789 TTAGATAATAAAAAA GCCACTA TTGGT TAGTGGC TTGTGGTGTAACTCA ssb3 1417254 - 1416820 - | single-strand binding protein NTHI1491 1417898 - 1417254 - | hypothetical protein NTHI1492 1418799 - 1417879 - | recombinational DNA repair protein, RecE pathway NTHI1493 1419105 - 1418812 - | hypothetical protein NTHI1494 1419446 - 1419102 - | hypothetical protein NTHI1495 1420197 - 1419460 - | modification methylase DpnIIB-like TERM 2030 1419594 - 1419624 + g 73 -6.9 -4.07687 | gap 1 GATCAATCACTACAT CGCCCTCATCGGTA AAGA TTTCGATGAGG-CG TTTTAACACGGCAAT NTHI1497 1421319 - 1420288 - | hypothetical protein TERM 2031 1420558 - 1420532 - G 70 -5.8 -4.20516 | GTGCCACGCAATAAA GCAAACCACGCC CAC GCCATTGTTTGC AATTCGTGTTCGGTA NTHI1498 1421560 - 1421309 - | hypothetical protein TERM 2032 1421595 - 1421580 - R 90 -8.2 -5.04987 | AATACCCTTAAAAAA CCGCCC TTTC GAGCGG TCAGTGGAGTAGTGC NTHI1499 1421990 - 1421679 - | hypothetical protein NTHI1501 1422561 - 1422376 - | hypothetical protein TERM 2033 1422636 - 1422649 + r 79 -3.9 -5.54192 | overlap 1422631 TGTAAATAGTTTTTT CTATA AAAA TATAG TTTTTTTGACTTGCT TERM 2034 1422701 - 1422686 - R 100 -11.8 -5.4833 | opp_overlap 1422682 TTAGGTAATAAAAAA GCCCGC GATT GCGGGC TGGGTGGGTTGTGTA NTHI1502 1423870 - 1422722 - | hypothetical protein NTHI1503 1424741 - 1423881 - | hypothetical protein TERM 2035 1424131 - 1424145 + g 70 -7.2 -3.87104 | TTTGATGTATCTACG CCTTTT GTT AAAAGG TTATTATAATCTGCG TERM 2036 1424796 - 1424769 - R 85 -9.2 -3.91412 | overlap 1424770 1424774 ATCACATTTTAGAAA CCAAACGCCTAC CGAA GCAGACGTTTGA TGAAAGTTTAAGCGA TERM 2037 1424795 - 1424770 - R 79 -10.5 -2.94365 | overlap 1424769 1424774 TCACATTTTAGAAAC CAAACGCCTAC CGAA GCAGACGTTTG ATGAAAGTTTAAGCG NTHI1504 1425169 - 1424804 - | hypothetical protein NTHI1505 1425758 - 1425171 - | hypothetical protein TERM 2038 1425335 - 1425356 + g 75 -4.3 -5.15969 | GATATTGCTGTACAT TGCCGCCGT AGTA GCGGTTGCA TTTTTTACATTGACC TERM 2039 1425645 - 1425690 + g 85 -10.5 -4.09685 | overlap 1425630 CTCGCGTGCCTTGCG GGTCTGTTCGCGCGAAAGT TTAATGGC ACATTCCGGCGAACAGACC TTTTGCAAGCTAGAA NTHI1507 1425914 - 1426099 + | hypothetical protein TERM 2040 1426108 - 1426082 - f 100 -12.3 -5.17353 | AGATCCATCAAAAAA TCGGCAGGGCT TCTAT AGCTCTGCCGA GCTAACCCACAAGGA NTHI1508 1426130 - 1426558 + | hypothetical protein NTHI1509 1427068 - 1426559 - | hypothetical protein NTHI1510 1427663 - 1427073 - | hypothetical protein NTHI1511 1428295 - 1427660 - | hypothetical protein NTHI1512 1429062 - 1428280 - | hypothetical protein NTHI1513 1429297 - 1429064 - | hypothetical protein TERM 2041 1429320 - 1429337 + r 100 -9.1 -5.85737 | TTCCTTAATGATTAG CCACGGT TCCC GCCGTGG TTTTTTTATTGCTCT NTHI1515 1429795 - 1429343 - | hypothetical protein NTHI1516 1430045 - 1429839 - | hypothetical protein TERM 2042 1429964 - 1429983 + g 83 -10 -3.89412 | AAGCAAAAACCGTAG GCTGTGCG ACAC TGCACAGC TTTGCTAATTTGGCT TERM 2043 1430324 - 1430308 - g 77 -5.9 -4.81249 | overlap 1430309 GGTGAAACTCAAAAA CCAAGAA ATA TTCTTGA GATTGCCAATGCGTT NTHI1517 1430179 - 1431147 + | hypothetical protein TERM 2044 1431166 - 1431153 - f 86 -8.1 -4.79352 | opp_overlap 1431153 GGATTTATAAGAAAA GGGGA AATT TCCCC TAAATTTTTTGAGTT TERM 2045 1431288 - 1431311 + F 100 -11 -4.6645 | overlap 1431296 1431298 CAAAAAATATTTACA GCCCTGAGCA GAAA TGCTTGGGGC TTTTCTGTATCTGTA TERM 2046 1431454 - 1431473 + G 93 -7.1 -5.60993 | opp_overlap 1431454 TATTCAAGCGGGAAA GCTCCAC TTTAGC GTGGGGC TTTTTTTATGCCAAG NTHI1518 1431341 - 1431667 + | hypothetical protein NTHI1519 1431654 - 1432058 + | hypothetical protein NTHI1520 1432055 - 1432444 + | hypothetical protein NTHI1521 1432419 - 1432649 + | hypothetical protein NTHI1522 1432658 - 1433617 + | hypothetical protein NTHI1523 1433596 - 1434015 + | DNA modification methylase NTHI1525 1434233 - 1434012 - | hypothetical protein TERM 2047 1434042 - 1434068 + g 89 -3.8 -5.71712 | gap 1, overlap 1434043 AATCAATGCTTGGAT G-CCCTGATAA ATTAAC TTATCGGGGTC TTTTTTTATCTGGCG TERM 2048 1434043 - 1434066 + g 80 -7.5 -4.50122 | overlap 1434042 ATCAATGCTTGGATG CCCTGATAA ATTAAC TTATCGGGG TCTTTTTTTATCTGG NTHI1526 1434291 - 1434659 + | hypothetical protein NTHI1527 1434673 - 1435989 + | phage terminase large subunit TERM 2049 1436018 - 1436008 - gf 70 -8.2 -3.25652 | overlap 1436006 1436009 GGCATTTAATCAAGA CGGC TAC GCCG AAGCCTTGGGGATTA TERM 2050 1436985 - 1436970 - gf 84 -7.6 -4.70583 | opp_overlap 1436980 TTCAGCAACATAAAA TCAAGC CAGT GCTTGA AAAGCTGATTGAGCT NTHI1528 1435991 - 1437307 + | hypothetical protein NTHI1529 1437237 - 1438049 + | uncharacterized protein, homolog of phage Mu protein gp30 TERM 2051 1438096 - 1438072 - g 71 -9.2 -2.64794 | GGTAATGCGATACGA CCGCCGTGGC ATTCA GGCACGGCGA GATGATAACGGTTTT TERM 2052 1438120 - 1438147 + G 86 -8.4 -4.56969 | opp_overlap 1438122 CGGTTTTATTTATGA CACCCCTATTCT GACA AGAAGTGGGGTG TTTGTTTATGAGCTT TERM 2053 1438552 - 1438528 - g 73 -9.3 -3.05384 | opp_overlap 1438518 1438519 TGGGCGTGCAGGCAA TGCCGCACTTA ATT TAGATGCGGCA GATGCCGTGGAATTT NTHI1530 1438055 - 1439128 + | hypothetical protein TERM 2054 1439192 - 1439172 - g 73 -2.6 -5.24416 | overlap 1439166 1439163 CAATTACAACAAAAA GCCTTT GCTGGTATG AAAGGC GACAGCCGTTACGAT NTHI1531 1439142 - 1439561 + | hypothetical protein TERM 2055 1439581 - 1439602 + G 100 -10.9 -5.4505 | opp_overlap 1439580 TCAATGTTTAACGAT GCCCTAAGT GAAA ACTTGGGGC TTTTTTATTGGAGAA NTHI1532 1439569 - 1440570 + | hypothetical protein NTHI1533 1440573 - 1440761 + | hypothetical protein NTHI1534 1440765 - 1441115 + | hypothetical protein NTHI1535 1441108 - 1441566 + | hypothetical protein NTHI1536 1441566 - 1441925 + | hypothetical protein TERM 2056 1441953 - 1441973 + G 100 -13.3 -4.63932 | TTTGTATGATTTATT GGGCGATCT ATC GGATCGCCC TTTTATTCGCGCCTA NTHI1537 1441927 - 1442436 + | hypothetical protein TERM 2057 1442911 - 1442891 - g 77 -8.3 -4.0098 | opp_overlap 1442893, overlap 1442893 CTTGAAGCGAAACAA TATTACCGC TCG GCGGTAATG TATTCCCATAAAGCA TERM 2058 1442909 - 1442893 - g 83 -10.9 -3.59372 | opp_overlap 1442893, overlap 1442891 TGAAGCGAAACAATA TTACCGC TCG GCGGTAA TGTATTCCCATAAAG TERM 2059 1442893 - 1442909 + G 80 -10.9 -3.08813 | opp_overlap 1442891 1442893 TGAAGCGAAACAATA TTACCGC TCG GCGGTAA TGTATTCCCATAAAG NTHI1538 1442423 - 1443496 + | hypothetical protein TERM 2060 1443505 - 1443524 + F 75 -4.9 -5.01732 | opp_overlap 1443505 1443504 1443508, overlap 1443506 TCTTTAATCATTAAC CGACCGC TAAAGT GCGGTCA TTTTTTAGGAGAATT TERM 2061 1443506 - 1443523 + F 73 -8.4 -3.60316 | opp_overlap 1443505 1443504 1443508, overlap 1443505 CTTTAATCATTAACC GACCGC TAAAGT GCGGTC ATTTTTTAGGAGAAT NTHI1539 1443542 - 1443967 + | hypothetical protein NTHI1540 1443967 - 1444449 + | hypothetical protein TERM 2062 1444471 - 1444501 + F 90 -8.3 -5.02074 | opp_overlap 1444463 1444470 1444472, overlap 1444472 GTAAATACAGCGAAC AGACGCTAAGTGA GATGA TCGCTTGGCGTCC TTTTTTAGCCGGTAA TERM 2063 1444472 - 1444500 + F 91 -11.8 -3.60762 | opp_overlap 1444463 1444472 1444470, overlap 1444471 TAAATACAGCGAACA GACGCTAAGTGA GATGA TCGCTTGGCGTC CTTTTTTAGCCGGTA NTHI1541 1444485 - 1444637 + | hypothetical protein NTHI1542 1444634 - 1447051 + | phage-related minor tail protein TERM 2064 1447077 - 1447056 - T 73 -4.4 -5.00884 | opp_overlap 1447056 ATGCTGGGTAAAAAA GTGCGGTT GATTTT AACCGTAC TTTAAAAAAACAAAA TERM 2065 1447088 - 1447123 + T 82 -9.8 -3.54548 | opp_overlap 1447088 1447093, overlap 1447093 CGTACTTTAAAAAAA CAAAACCCCGAAACGT TAAA GCATTTCGGGGTTTTC TATTATTGTGTGATT TERM 2066 1447123 - 1447088 - T 100 -11.3 -5.44119 | opp_overlap 1447088 1447093, overlap 1447093 CGTACTTTAAAAAAA CAAAACCCCGAAACG TTAAAG CATTTCGGGGTTTTC TATTATTGTGTGATT TERM 2067 1447118 - 1447093 - T 100 -11.2 -5.55855 | opp_overlap 1447088 1447093, overlap 1447088 TTTAAAAAAACAAAA CCCCGAAACG TTAAAG CATTTCGGGG TTTTCTATTATTGTG TERM 2068 1447093 - 1447118 + T 100 -9.7 -4.82162 | opp_overlap 1447093 1447088, overlap 1447088 TTTAAAAAAACAAAA CCCCGAAACGT TAAA GCATTTCGGGG TTTTCTATTATTGTG NTHI1543 1447698 - 1447126 - | hypothetical protein TERM 2069 1447505 - 1447536 + g 83 -11 -3.40601 | opp_overlap 1447513, overlap 1447507 1447513 TGAGTGCCGCGAATA GTTTTAAATGCGCA GATC TGCGCATTTAGATC TTCGTCTTGAATTTC TERM 2070 1447507 - 1447534 + g 89 -12.2 -3.26189 | opp_overlap 1447513, overlap 1447505 1447513 AGTGCCGCGAATAGT TTTAAATGCGCA GATC TGCGCATTTAGA TCTTCGTCTTGAATT TERM 2071 1447528 - 1447513 - G 74 -9 -3.6106 | opp_overlap 1447507 1447505 1447513 GCGAATAGTTTTAAA TGCGCA GATC TGCGCA TTTAGATCTTCGTCT TERM 2072 1447513 - 1447528 + g 76 -9 -3.78233 | opp_overlap 1447513, overlap 1447507 1447505 GCGAATAGTTTTAAA TGCGCA GATC TGCGCA TTTAGATCTTCGTCT TERM 2073 1447922 - 1447906 - H 78 -2.2 -5.71712 | TTGGATACAAAAAAA TCACAC TAACG GGGTGA AAACCGTATCTGATA NTHI1544 1448006 - 1448587 + | hypothetical protein NTHI1546 1448584 - 1448898 + | hypothetical protein NTHI1547 1448895 - 1449851 + | hypothetical protein NTHI1548 1449854 - 1450525 + | hypothetical protein TERM 2074 1450606 - 1450627 + G 70 -5.9 -4.31329 | opp_overlap 1450606 GGCATCAATCAAAAA GCACAAC AGATTAAG GTTGTGC TTTTAACGTTTTTAG TERM 2075 1450627 - 1450606 - g 79 -5.9 -4.90266 | opp_overlap 1450606 GGCATCAATCAAAAA GCACAAC AGATTAAG GTTGTGC TTTTAACGTTTTTAG NTHI1549 1450522 - 1450887 + | hypothetical protein TERM 2076 1452007 - 1451990 - g 70 -7.1 -3.74693 | opp_overlap 1451988 1451990 CCGCACTTGATTAAA TTTAGTC GTCC GACTAAA TGTTACATTTGGTTA NTHI1550 1450880 - 1452316 + | hypothetical protein NTHI1551 1452325 - 1452939 + | hypothetical protein TERM 2077 1454908 - 1454893 - g 79 -7.6 -4.30416 | opp_overlap 1454892 1454893, overlap 1454907 ATCACCAATGCAAAA GCTGAT ATAA ATCAGC AATTTTTGCAGGCAC NTHI1552 1452949 - 1455297 + | tail fiber protein TERM 2078 1455356 - 1455330 - g 71 -6.8 -4.09685 | opp_overlap 1455320 GTCTATTTTTTAAAA GAAAATTTGA ATAGTTA TCAAATTTTC CCTATTCCTCAAAAC NTHI1553 1455309 - 1455911 + | hypothetical protein TERM 2079 1455967 - 1455954 - g 100 -8.1 -5.59564 | ACAAAGGTAAAAAAA CGGGT AAAA ACCCG AGCGCACTTTTGGCA NTHI1554 1455908 - 1456408 + | hypothetical protein TERM 2080 1456716 - 1456696 - g 72 -6.9 -4.03204 | overlap 1456692 1456699 CAGGAAAGCTACAAA CAAGCCAAA TAT TTTGACCTG ATTGACTTCTTGCGA NTHI1555 1456474 - 1456923 + | hypothetical protein TERM 2081 1456955 - 1456934 - T 100 -10.1 -4.7497 | opp_overlap 1456934 TTTAGCTATGAAAAA GGCTTCGGG TGAT CACGAAGCC TTTGTTTTAGTCTTC TERM 2082 1456934 - 1456955 + T 100 -10.1 -4.77698 | opp_overlap 1456934 TTTAGCTATGAAAAA GGCTTCGGG TGAT CACGAAGCC TTTGTTTTAGTCTTC NTHI1556 1457225 - 1456962 - | hypothetical protein TERM 2083 1457413 - 1457393 - R 76 -2.6 -5.40004 | opp_overlap 1457393 CACTAAATGAAAAAA CAAGAAAA GGAAA TTATCTTG CTTTTTTAGGAACGG TERM 2084 1457467 - 1457493 + r 100 -11 -4.56358 | opp_overlap 1457467 1457461 AGTGTAAAATTTAAA CGCCCTTTAA TGATGAT TTAAAGGGCG TTTTGTCTAGATATA TERM 2085 1457493 - 1457467 - R 93 -11 -3.93061 | opp_overlap 1457467, overlap 1457461 AGTGTAAAATTTAAA CGCCCTTTAA TGATGAT TTAAAGGGCG TTTTGTCTAGATATA NTHI1560 1459290 - 1459009 - | hypothetical protein TERM 2086 1459130 - 1459110 - G 82 -11.1 -3.33696 | opp_overlap 1459110 TGGTCTCCGAATTAA GTGCGGTGG AAC CCAACGCAC TTTTCGCTGATTTAA TERM 2087 1459110 - 1459130 + g 88 -11.1 -4.26079 | opp_overlap 1459110 TGGTCTCCGAATTAA GTGCGGTGG AAC CCAACGCAC TTTTCGCTGATTTAA TERM 2088 1459143 - 1459172 + g 73 -2.9 -5.23292 | opp_overlap 1459146, overlap 1459146 CACTTTTCGCTGATT TAATCACCCAGTT TTTT AATTTGGTGATGA TTTTCTTTTCTGTGA NTHI1561 1459338 - 1459523 + | hypothetical protein NTHI1562 1459583 - 1460251 + | hypothetical protein NTHI1563 1460353 - 1460499 + | hypothetical protein NTHI1564 1460532 - 1461068 + | hypothetical protein TERM 2089 1461095 - 1461078 - f 87 -9.9 -4.06786 | opp_overlap 1461078 ATTTAATAGCAGAAA GTGAGCA AAAT TGCTCAC TTTTTTCAGTCTTAA TERM 2090 1461078 - 1461095 + F 100 -9.9 -5.1615 | opp_overlap 1461078 ATTTAATAGCAGAAA GTGAGCA AAAT TGCTCAC TTTTTTCAGTCTTAA TERM 2091 1461158 - 1461175 + F 90 -11.3 -3.54662 | opp_overlap 1461153 1461169 TTTTTAATCATTTCA CACCCAG TATA CTGGGTG TTGTACTCTCTTTAC NTHI1565 1461269 - 1461715 + | hypothetical protein NTHI1566 1461715 - 1461891 + | hypothetical protein NTHI1567 1461903 - 1462562 + | hypothetical protein NTHI1568 1462562 - 1462738 + | hypothetical protein NTHI1569 1462751 - 1463305 + | hypothetical protein NTHI1570 1463305 - 1463481 + | hypothetical protein NTHI1571 1463494 - 1464045 + | hypothetical protein prfA 1464321 - 1465406 + | peptide chain release factor 1 TERM 2092 1465413 - 1465434 + F 100 -10.9 -4.81249 | opp_overlap 1465412 CAGAATTAATGATAG GGGCATCTG ATTT CAGATGTCC TTTTTAACTTTAAAA NTHI1573 1465429 - 1465899 + | hypothetical protein TERM 2093 1466079 - 1466058 - g 88 -8.7 -4.76041 | opp_overlap 1466058, overlap 1466074 GAGATTGATGAAAAA GTGCGGTTA AAAT TGACCGCAC TTTTAGATCGTCGTC TERM 2094 1466058 - 1466079 + G 88 -10.9 -4.21908 | opp_overlap 1466058 1466074 GAGATTGATGAAAAA GTGCGGTTA AAAT TGACCGCAC TTTTAGATCGTCGTC hemK 1465899 - 1466777 + | hypothetical protein TERM 2095 1466926 - 1466907 - g 85 -5.8 -5.41746 | gap 1 AAGCGCGTAAAAAAA TTTC-GCCA GAT TGGCCGAAA GAAGAGCAGATTCAT NTHI1575 1466777 - 1467580 + | hypothetical protein kdsA 1467595 - 1468449 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2096 1468483 - 1468462 - f 89 -8.7 -4.29432 | opp_overlap 1468462 TAAATTTCATCAAAA GTGCGGTTA ATTT TGACCGCAC TTTGTATATAAAAAA TERM 2097 1468462 - 1468483 + F 100 -10.9 -4.12532 | opp_overlap 1468462 TAAATTTCATCAAAA GTGCGGTTA ATTT TGACCGCAC TTTGTATATAAAAAA NTHI1577 1468509 - 1469456 + | glycerate dehydrogenase lolC 1469456 - 1470637 + | lipoprotein releasing system transmembrane protein bioA 1470649 - 1471941 + | adenosylmethionine--8-amino-7-oxononanoate transaminase bioF 1471950 - 1473089 + | 8-amino-7-oxononanoate synthase NTHI1581 1473099 - 1473746 + | hypothetical protein TERM 2098 1474012 - 1474023 + G 73 -3 -5.22006 | opp_overlap 1474006 CACTGAAAAGCTGAT TCAA CCCT TTGA TTTTTATTGTGGTGA bioC 1473734 - 1474516 + | putative biotin synthesis protein BioC TERM 2099 1475125 - 1475137 + G 72 -7.7 -3.74224 | TCTTGAAAAACATTT TCCTG AAA CAGGA TTTGAATACTTTGGG bioD 1474526 - 1475167 + | dithiobiotin synthetase lolD 1475249 - 1475932 + | lipoprotein releasing system ATP-binding protein LolD TERM 2100 1475925 - 1475943 + F 74 -2.3 -5.4833 | overlap 1475926 GTCTTTTGAAGGAGG GGGCGTG ATGAA TACGCCG TTTTTTATTAGCTGG TERM 2101 1476873 - 1476889 + G 85 -5.9 -5.35815 | opp_overlap 1476873, overlap 1476845 1476845 1476875 GCTTGGGGCGAATAA TGCGTTT ATC AAACGTA TTTTTATTTGGTATG TERM 2102 1476875 - 1476887 + G 70 -6.3 -4.29436 | opp_overlap 1476873, overlap 1476845 1476873 TTGGGGCGAATAATG CGTTT ATC AAACG TATTTTTATTTGGTA lolE 1475932 - 1477182 + | outer membrane-specific lipoprotein transporter subunit LolE TERM 2103 1477192 - 1477211 + F 95 -6.4 -5.9362 | opp_overlap 1477196 CATTAATTTCGAGAG TACAGCAC AAAA GTGCGGTA TTTTTTTATCTTTTA TERM 2104 1478270 - 1478255 - g 75 -3.3 -5.23765 | TAAACAATATAAAAA GCAAA TGGATG TTTGC CAAGACGTATGTAAT aroG 1477401 - 1478489 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2105 1478540 - 1478519 - T 80 -9.5 -3.63762 | gap 1, opp_overlap 1478519 AGATACTAGATAGAA GTGCGGTTGA TTT TCA-CCGCAC TTTTTTATTTGCTTT TERM 2106 1478519 - 1478540 + T 100 -9.5 -5.74086 | gap 1, opp_overlap 1478519 AGATACTAGATAGAA GTGCGGTTGA TTT TCA-CCGCAC TTTTTTATTTGCTTT impA 1478999 - 1478559 - | ImpA NTHI1589 1479284 - 1480528 + | serine/threonine transporter SstT TERM 2107 1480566 - 1480544 - f 76 -7.6 -3.97674 | opp_overlap 1480548, overlap 1480546 1480548 TGATGATGCAAATAA GAGAGCGGGC TAT GCCCGCTTTT TTTTATGTGATTTTA TERM 2108 1480564 - 1480546 - f 86 -10.2 -3.57587 | opp_overlap 1480548, overlap 1480544 1480548 ATGATGCAAATAAGA GAGCGGGC TAT GCCCGCTT TTTTTTATGTGATTT TERM 2109 1480562 - 1480548 - f 93 -12.8 -3.35723 | opp_overlap 1480548, overlap 1480546 1480544 GATGCAAATAAGAGA GCGGGC TAT GCCCGC TTTTTTTTATGTGAT TERM 2110 1480548 - 1480562 + F 100 -12.8 -6.0427 | opp_overlap 1480548 1480546 1480544 GATGCAAATAAGAGA GCGGGC TAT GCCCGC TTTTTTTTATGTGAT NTHI1590 1480650 - 1481258 + | putative NAD(P)H oxidoreductase TERM 2111 1481298 - 1481312 + G 79 -3.6 -5.39755 | overlap 1481296 TTTCATTAATTAGTC GATTAT TCG GTAATC TTTTTTATCGTTCTC NTHI1591 1481258 - 1481812 + | putative component of anaerobic dehydrogenase NTHI1592 1482413 - 1481859 - | nitroreductase sppA 1482511 - 1484358 + | protease IV TERM 2112 1484370 - 1484389 + T 81 -9.3 -3.75332 | opp_overlap 1484370 GTAATAATTGAAAAA GGGCAGA ATTAAA TCTGCCC TTTCGCTTACAAAAT TERM 2113 1484389 - 1484370 - T 100 -9.3 -4.8143 | opp_overlap 1484370 GTAATAATTGAAAAA GGGCAGA ATTAAA TCTGCCC TTTCGCTTACAAAAT licD 1485193 - 1484396 - | phosphorylcholine transferase licC 1485894 - 1485193 - | LicC licB 1486769 - 1485891 - | LicB licA 1487728 - 1486769 - | LicA mnmC 1489828 - 1487816 - | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 2114 1489020 - 1489008 - G 72 -5.5 -4.52873 | GCTGCACAAAAAGAA GCGAT ACC ACCGC CGATAATAGCGACAT fabB 1489975 - 1491195 + | 3-oxoacyl-(acyl carrier protein) synthase I TERM 2115 1491234 - 1491213 - T 100 -13.1 -4.7373 | opp_overlap 1491213 CGATTCTATGAAAAA GCCACTTTC GATT GAAAGTGGC TTTTTTGTAAATTAA TERM 2116 1491213 - 1491234 + T 100 -13.1 -5.31456 | opp_overlap 1491213 CGATTCTATGAAAAA GCCACTTTC GATT GAAAGTGGC TTTTTTGTAAATTAA grxA 1491521 - 1491258 - | glutaredoxin 1 rimK 1491638 - 1492546 + | ribosomal protein S6 modification protein TERM 2117 1492525 - 1492551 + T 100 -9.6 -5.09173 | opp_overlap 1492525 TTATATTGAAATAAA TGCCTTTATC AATTTAA GATAAAGGCA TTTTTTAAAATATTG TERM 2118 1492551 - 1492525 - T 100 -9.6 -4.48299 | opp_overlap 1492525 TTATATTGAAATAAA TGCCTTTATC AATTTAA GATAAAGGCA TTTTTTAAAATATTG gltS 1493798 - 1492584 - | Sodium/glutamate symport carrier protein parC 1496083 - 1493840 - | DNA topoisomerase IV subunit A TERM 2119 1494209 - 1494227 + g 70 -8.9 -3.07994 | opp_overlap 1494208 1494209, overlap 1494212 TTCTGGTAAAGAAAT CAAGGCT TTTCC AGCCTTG TTACGTGCAATTAAA TERM 2120 1494227 - 1494209 - G 72 -8.9 -3.24488 | opp_overlap 1494209 1494212, overlap 1494208 TTCTGGTAAAGAAAT CAAGGCT TTTCC AGCCTTG TTACGTGCAATTAAA parE 1498048 - 1496150 - | DNA topoisomerase IV subunit B TERM 2121 1498119 - 1498098 - R 100 -9.5 -4.75404 | gap 1, opp_overlap 1498098 AAATTCTATCAAAAA GTGCGGT-GA TAT TCGACCGCAC TTTTAATCGTATAAA TERM 2122 1498098 - 1498119 + r 93 -9.5 -4.33274 | gap 1, opp_overlap 1498098 AAATTCTATCAAAAA GTGCGGT-GA TAT TCGACCGCAC TTTTAATCGTATAAA htrB 1499057 - 1498122 - | lipid A biosynthesis lauroyl acyltransferase TERM 2123 1498443 - 1498427 - G 76 -5.1 -5.17507 | AAAAGGGAACAAAAA CGGCA TTTTTTC TGCCG TAATCGTGATCAGGC TERM 2124 1499104 - 1499123 + H 80 -7.2 -4.56133 | overlap 1499110 TATCGTAAATTTGAG TTGTGGTA AAAT TGCCACAA TTTTGGTTATTCAAA rfaE 1499154 - 1500584 + | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase NTHI1611 1501611 - 1501255 - | hypothetical protein uupA2 1501722 - 1502126 + | ABC transporter ATP-binding protein TERM 2125 1502403 - 1502424 + G 72 -8.7 -3.28924 | opp_overlap 1502403 CGCTAAAAGAAGAAA GTGCGGTGA AAAA TGACCGCAC TTCTAAGCCGAAATC TERM 2126 1502424 - 1502403 - g 86 -8.7 -4.67697 | opp_overlap 1502403 CGCTAAAAGAAGAAA GTGCGGTGA AAAA TGACCGCAC TTCTAAGCCGAAATC uppB 1502123 - 1502683 + | ABC transporter ATP-binding protein TERM 2127 1502708 - 1502689 - T 93 -7.8 -5.49809 | opp_overlap 1502692, overlap 1502692 TAAAGCTTAAAAAAA TAACGCCC AAAA GGGCGTTT TTTTATGTATTTTCA TERM 2128 1502705 - 1502692 - T 100 -9.5 -4.80853 | opp_overlap 1502692, overlap 1502689 AGCTTAAAAAAATAA CGCCC AAAA GGGCG TTTTTTTATGTATTT TERM 2129 1502692 - 1502705 + T 100 -9.5 -5.82281 | opp_overlap 1502689 1502692 AGCTTAAAAAAATAA CGCCC AAAA GGGCG TTTTTTTATGTATTT NTHI1614 1503400 - 1502711 - | putative carbonic anhydrase TERM 2130 1503428 - 1503457 + r 74 -9.4 -3.10236 | opp_overlap 1503428 AAAATTCTGAAAAAA TTAACCGCACTT TGGCGT AAGTGCGGTCAA TATTAAAGTTAAATT TERM 2131 1503457 - 1503428 - R 100 -11.6 -5.08011 | opp_overlap 1503428 AAAATTCTGAAAAAA TTAACCGCACTT TGGCGT AAGTGCGGTCAA TATTAAAGTTAAATT asnC 1504879 - 1503476 - | asparaginyl-tRNA synthetase TERM 2132 1503808 - 1503823 + g 70 -7.6 -3.69332 | CTTTTGGATAGTTTT TCACCA CAAC TGGTGA TTTGAAATATTCTTC ribH 1505106 - 1505579 + | riboflavin synthase subunit beta nusB 1505583 - 1506017 + | transcription antitermination protein NusB TERM 2133 1506036 - 1506058 + F 100 -12 -5.18371 | opp_overlap 1506035 1506036 TTTTAAACTGAGAAT GGCGCGCGTT TTT AATGCGTGCC TTTTCTTTTATAAGA TERM 2134 1506517 - 1506506 - g 76 -3 -5.40072 | TTTTGTCGAAAAAAA CAAA GGAA TTTG TCGGCATAAAGCACA TERM 2135 1506980 - 1506997 + G 70 -2.6 -5.02074 | opp_overlap 1506972 AATTAATGAAAAGTG CGGTGA CTTTTC TCCCCG TTTTTTACGGGATGG thiL 1506084 - 1507070 + | thiamine-monophosphate kinase pgpA 1507067 - 1507558 + | phosphatidylglycerophosphatase A NTHI1620 1507558 - 1508187 + | threonine efflux protein TERM 2136 1508434 - 1508405 - g 81 -7.3 -4.81249 | opp_overlap 1508407 1508412 CTTGAAAGCCAAAAA GATAAATTCGATT TATT AATCGATTTTACC CGACCAGAAGGCTCC dapB 1508204 - 1509016 + | dihydrodipicolinate reductase NTHI1622 1509259 - 1509011 - | ferredoxin-like protein NTHI1623 1509305 - 1510045 + | hypothetical protein TERM 2137 1510056 - 1510079 + F 100 -10.4 -5.65496 | opp_overlap 1510056 GGTAACAAGAAAAAA TGGAATAGCG AATA CGTTATTCCA TTTTTATTTTTGATA TERM 2138 1510079 - 1510056 - f 93 -8.2 -5.64873 | opp_overlap 1510056 GGTAACAAGAAAAAA TGGAATAGCG AATA CGTTATTCCA TTTTTATTTTTGATA TERM 2139 1511129 - 1511110 - g 78 -9.4 -3.62597 | opp_overlap 1511109 1511108 1511123, overlap 1511123 TTGAGCGTTTAACAA TGTTACGT TATA ACGTAACA GATTTACGTTCGTTC pheS 1510194 - 1511183 + | phenylalanyl-tRNA synthetase subunit alpha TERM 2140 1512661 - 1512647 - g 74 -7.8 -3.94634 | overlap 1512634 CAGCATTCCAAACAA TGCGCC ATT AGCGCA TCTCCGCATGCGTGA pheT 1511217 - 1513604 + | phenylalanyl-tRNA synthetase subunit beta himA 1513606 - 1513896 + | integration host factor alpha-subunit TERM 2141 1513941 - 1513901 - f 81 -10.8 -2.70153 | gap 2, opp_overlap 1513910, overlap 1513910 AAACTAAATAGTAAG CA-ACAAAAAGTGCGGT-GA ATT TCTACCGCACTTTTTATATG AAAAGGTATGAAAGT TERM 2142 1513910 - 1513931 + F 100 -9.5 -4.96848 | gap 1, opp_overlap 1513901 1513910 AGTAAGCAACAAAAA GTGCGGT-GA ATT TCTACCGCAC TTTTTATATGAAAAG TERM 2143 1513931 - 1513910 - f 100 -9.5 -5.20534 | gap 1, opp_overlap 1513910, overlap 1513901 AGTAAGCAACAAAAA GTGCGGT-GA ATT TCTACCGCAC TTTTTATATGAAAAG NTHI1627 1513949 - 1514434 + | lipoprotein TERM 2144 1514444 - 1514461 + G 100 -9.9 -5.33785 | opp_overlap 1514438 1514444 ATTTAAAAAGTATAA TGCTGGA ATTT TCCAGCA TTTTTTATAATGATT TERM 2145 1514461 - 1514444 - g 81 -9.9 -3.76107 | opp_overlap 1514444, overlap 1514438 ATTTAAAAAGTATAA TGCTGGA ATTT TCCAGCA TTTTTTATAATGATT NTHI1628 1514443 - 1515453 + | hypothetical protein NTHI1629 1515512 - 1515967 + | putative 5'(3')-deoxyribonucleotidase NTHI1630 1515951 - 1516661 + | NAD-dependent deacetylase TERM 2146 1516681 - 1516712 + T 77 -3 -5.50925 | opp_overlap 1516684 1516688, overlap 1516688 ATGACCGCACTTTTT AAACAAATAGCGAC TTCG GTCGCTATTTATCA TTTTTTCTCTTGCTT TERM 2147 1516709 - 1516684 - T 90 -11.3 -3.55563 | opp_overlap 1516681 1516688, overlap 1516688 ACCGCACTTTTTAAA CAAATAGCGAC TTCG GTCGCTATTTA TCATTTTTTCTCTTG TERM 2148 1516688 - 1516705 + T 100 -9.9 -4.33146 | opp_overlap 1516684 1516688, overlap 1516681 CACTTTTTAAACAAA TAGCGAC TTCG GTCGCTA TTTATCATTTTTTCT TERM 2149 1516705 - 1516688 - T 100 -9.9 -4.42062 | opp_overlap 1516688 1516681, overlap 1516684 CACTTTTTAAACAAA TAGCGAC TTCG GTCGCTA TTTATCATTTTTTCT NTHI1631 1517732 - 1516710 - | hypothetical protein TERM 2150 1517494 - 1517522 + g 79 -8.9 -4.08948 | opp_overlap 1517501, overlap 1517498 CGTTTACCTTCTTGG CGAACTATCCGGA ATT TCCGGATAGTTGA TTCTTTCTCAAGTTC TERM 2151 1517498 - 1517518 + g 100 -14.1 -3.65699 | opp_overlap 1517501, overlap 1517494 TACCTTCTTGGCGAA CTATCCGGA ATT TCCGGATAG TTGATTCTTTCTCAA TERM 2152 1517515 - 1517501 - G 74 -10 -2.70932 | opp_overlap 1517498 1517494 CTTCTTGGCGAACTA TCCGGA ATT TCCGGA TAGTTGATTCTTTCT ftsK2 1517927 - 1518127 + | DNA translocase FtsK TERM 2153 1518936 - 1518925 - g 70 -5.8 -4.29738 | opp_overlap 1518924 1518925 TTAGATGCACTAAAA GCGA TTGA TCGC CTTCTAAATCCTTCT NTHI1634 1518124 - 1518969 + | NAD-dependent deacetylase sirtuin 5 NTHI1635 1518969 - 1519730 + | hypothetical protein NTHI1636 1519808 - 1520782 + | hypothetical protein TERM 2154 1520825 - 1520851 + F 100 -9.6 -5.76633 | opp_overlap 1520825 CACTACTCACTAAAA TACTCCTTAC CAACCCA GTAAGGAGTA TTTTTTTATGTCTGA TERM 2155 1520851 - 1520825 - f 100 -11 -4.28994 | opp_overlap 1520825 CACTACTCACTAAAA TACTCCTTACCA ACC CAGTAAGGAGTA TTTTTTTATGTCTGA NTHI1637 1520859 - 1521026 + | hypothetical protein TERM 2156 1522336 - 1522325 - g 79 -5.8 -4.87626 | CGGGAACAGGAAAAA CTGC TTGG GCAG CGTGGCTTGCGGAAC NTHI1638 1521196 - 1522911 + | serine/threonine protein phosphatase family protein NTHI1639 1522931 - 1523368 + | arylsulfatase A-like enzyme TERM 2157 1523404 - 1523386 - f 91 -13.2 -3.27215 | opp_overlap 1523386 AAAGTCGTAGATTAA GGGCGTAT CTG ATACGCCC TTTGTTATCTCTGCA TERM 2158 1523386 - 1523404 + F 100 -13.2 -4.42974 | opp_overlap 1523386 AAAGTCGTAGATTAA GGGCGTAT CTG ATACGCCC TTTGTTATCTCTGCA NTHI1640 1523450 - 1524262 + | enzyme related to aldose 1-epimerase infC 1524530 - 1524937 + | translation initiation factor IF-3 TERM 2159 1524942 - 1524963 + F 83 -8.1 -4.2793 | opp_overlap 1524942 1524941, overlap 1524954 1524960 AGAAAAAATAAGAAT TTTGCTGAG ATTC TTCAGCAAA TCTTTTTGTTTAAGT TERM 2160 1525281 - 1525265 - g 70 -5.9 -4.31403 | AAAAAAACAACTAAA CGTAAAC GTC ATTTACG TCATAAATCAATGGT rpmI 1525148 - 1525345 + | 50S ribosomal protein L35 rplT 1525411 - 1525764 + | 50S ribosomal protein L20 TERM 2161 1525813 - 1525792 - f 71 -8.7 -3.10305 | opp_overlap 1525794, overlap 1525791 1525794 TAGATAAAGAAGAAT TAGGACGCT GAAA AGCGTCCTT TTTTTGCATTTGTGA TERM 2162 1525811 - 1525794 - f 84 -11.3 -3.08962 | opp_overlap 1525794, overlap 1525792 1525791 GATAAAGAAGAATTA GGACGCT GAAA AGCGTCC TTTTTTTGCATTTGT TERM 2163 1525794 - 1525811 + F 100 -11.3 -5.59564 | opp_overlap 1525794 1525792 1525791 GATAAAGAAGAATTA GGACGCT GAAA AGCGTCC TTTTTTTGCATTTGT TERM 2164 1527615 - 1527629 + G 76 -10 -3.15996 | opp_overlap 1527608, overlap 1527613 GTAAAACATTGCAAG CGGCAA ATA TTGCCG TATTAGTGCGTGATA TERM 2165 1527926 - 1527912 - g 86 -10 -4.33153 | overlap 1527904 CTCAATACCAACAAA CTTGGC AAC GCCAAG GAATATTGGCAATGT recB 1525877 - 1529512 + | exodeoxyribonuclease V beta chain TERM 2166 1530273 - 1530257 - g 82 -5.2 -5.4833 | opp_overlap 1530257 TTATGCAAGAAAAAA TGAATG TATCC CATTCA CTTTTCAATGCGATT TERM 2167 1530322 - 1530333 + G 70 -7.2 -3.84246 | TTGCATAGTTTACTG GGCG TGAA CGCC TTTAATGATTACACG TERM 2168 1530815 - 1530836 + G 79 -8.7 -4.17958 | opp_overlap 1530815 ATCAAGTGGTGAAAA GTGCGGTGG AAAA TTACCGCAC TTTCTTAAAAATGTT TERM 2169 1530836 - 1530815 - g 73 -7.3 -4.11751 | opp_overlap 1530815 ATCAAGTGGTGAAAA GTGCGGT GGAAAATT ACCGCAC TTTCTTAAAAATGTT recD 1529512 - 1531434 + | exodeoxyribonuclease V alpha chain NTHI1647 1531949 - 1531503 - | hypothetical protein TERM 2170 1531660 - 1531673 + g 79 -2.4 -5.5353 | AGCCAAACAGCATAT TCCA AATCAA TGGA TTTTTTCTTGGTATG TERM 2171 1531922 - 1531934 + g 71 -4.1 -4.946 | ATTTCCAATTTGATT CTTGA TTT TCGAG TTTTTGGTATTTCAT lonB 1532046 - 1533851 + | putative protease La TERM 2172 1533856 - 1533881 + F 93 -8.4 -5.75478 | opp_overlap 1533856 TCCGCTCCTAATAGA GAAAAGCGAG CATTTT TTCGCTTTTC TTTTTTTCTATAATT fabA 1534020 - 1534553 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 2173 1534613 - 1534579 - f 89 -8.7 -4.57474 | opp_overlap 1534580, overlap 1534580 TTAATTTATATAAAA GTGCGGTGAAAATTT TTCTT AGATTTTCACCGCAT TTTTCCTTATTAAAT TERM 2174 1534580 - 1534612 + F 100 -14.4 -4.99435 | opp_overlap 1534579 1534580 TAATTTATATAAAAG TGCGGTGAAAATTT TTCTT AGATTTTCACCGCA TTTTTCCTTATTAAA TERM 2175 1534612 - 1534580 - f 90 -12.2 -3.33761 | opp_overlap 1534580, overlap 1534579 TAATTTATATAAAAG TGCGGTGAAAATTT TTCTT AGATTTTCACCGCA TTTTTCCTTATTAAA NTHI1650 1534789 - 1535517 + | hypothetical protein NTHI1651 1535514 - 1535651 + | hypothetical protein TERM 2176 1535827 - 1535811 - g 93 -5.1 -5.82316 | opp_overlap 1535811 1535814, overlap 1535812 AGTACTGAAAAAAAA GCAGCAA TCG TTGCTGA ATTTGGTCGTGATGC TERM 2177 1535826 - 1535812 - g 79 -8.6 -4.07763 | opp_overlap 1535811 1535814, overlap 1535811 GTACTGAAAAAAAAG CAGCAA TCG TTGCTG AATTTGGTCGTGATG TERM 2178 1535943 - 1535931 - g 100 -7.7 -5.34555 | opp_overlap 1535936 GCAGAGCATAAAAAA GACCA CCA TGGTC GTCGTGGTTTATTAC rpsO 1535787 - 1536056 + | 30S ribosomal protein S15 TERM 2179 1536084 - 1536102 + T 82 -5.2 -5.252 | opp_overlap 1536084 ATAGTAAAAAATCAA GCCCTAGA ATA TTGAGGGC TTTTTTATGGGGCTG NTHI1653 1536499 - 1536128 - | putative transposase-like protein NTHI1654 1536612 - 1536496 - | hypothetical protein dacB 1538267 - 1536828 - | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 2180 1537329 - 1537340 + g 72 -2.2 -5.25656 | TAATGAATCGGCAAT TTGG TTAT CCGA TTTTTTCATCATTTT TERM 2181 1538371 - 1538400 + H 93 -7.3 -5.67711 | overlap 1538374 TTATTTTTGATAATA CTGCAGTAAGATT TTAG AATTTTACTGTGG TTTTTGTTTTATTTA TERM 2182 1538588 - 1538574 - g 78 -10 -3.33587 | overlap 1538572 AGAAAATGCAGAATA TCACGC AGC GCGTGA GCAACAAGGTTTTTG TERM 2183 1538815 - 1538799 - g 70 -7.9 -3.55622 | opp_overlap 1538798 TTTAATTTCGGTAAA CTCGCCC ATT GCGCGAG GCTTAATTGGTAAAG greA 1538431 - 1538907 + | transcription elongation factor GreA TERM 2184 1538911 - 1538942 + T 100 -11 -4.10744 | opp_overlap 1538916, overlap 1538916 AATTATATTTAAATA AAAAAGTGCGGTTA AAAA TGACCGCACTTTTG TTGTTATTTGCGTGG TERM 2185 1538937 - 1538916 - T 95 -8.7 -5.65927 | opp_overlap 1538911 1538916 TATTTAAATAAAAAA GTGCGGTTA AAAA TGACCGCAC TTTTGTTGTTATTTG TERM 2186 1538916 - 1538937 + T 100 -10.9 -5.04082 | opp_overlap 1538916, overlap 1538911 TATTTAAATAAAAAA GTGCGGTTA AAAA TGACCGCAC TTTTGTTGTTATTTG NTHI1659 1539245 - 1538946 - | RNA-binding protein rrmJ 1539372 - 1540001 + | 23S rRNA methyltransferase J TERM 2187 1540342 - 1540320 - g 78 -3.5 -5.47159 | CTTGAAGATAAAAAA TTGCTTGAT GATTT ATTAAGCAA AAAAGTGAAAGTGGA ftsH 1540092 - 1541999 + | cell division protein FtsH homolog 1 TERM 2188 1542005 - 1542030 + F 100 -9.1 -5.19212 | opp_overlap 1542009, overlap 1542009 TAATGTTTAACTTAT CAAAGCCTTTC TTCG GAAAGGCTTTA TTTTTTCCTAATGAT TERM 2189 1542026 - 1542009 - f 83 -9.9 -3.794 | opp_overlap 1542005 1542009 GTTTAACTTATCAAA GCCTTTC TTCG GAAAGGC TTTATTTTTTCCTAA TERM 2190 1542009 - 1542026 + F 100 -9.9 -5.0917 | opp_overlap 1542009, overlap 1542005 GTTTAACTTATCAAA GCCTTTC TTCG GAAAGGC TTTATTTTTTCCTAA folP 1542111 - 1542941 + | dihydropteroate synthase TERM 2191 1543753 - 1543742 - g 72 -5.8 -4.50627 | CATTTAGGAAATAAA GTCG ATGG CGAC CAAATTCTCTTTATT mrsA 1542974 - 1544311 + | phosphomannomutase TERM 2192 1544319 - 1544338 + F 100 -12.2 -4.96501 | TTAATTAATTTTTGA CCGCACTT AGTA AAGTGCGG TTTATTTTTATAAAG sixA 1544370 - 1544864 + | phosphohistidine phosphatase SixA-like protein TERM 2193 1544897 - 1544887 - f 72 -2.6 -5.24129 | opp_overlap 1544869 1544887 1544896, overlap 1544869 TTTTTTTACAAAAAA TAAA ATT TTTA TTGGTTTTTTATATA NTHI1667 1545066 - 1545641 + | hypothetical protein TERM 2194 1545697 - 1545657 - T 100 -13.8 -3.75629 | gap 1, opp_overlap 1545657 1545665, overlap 1545660 1545665 TAGGTTTAATTTAAA TAACAAAATCCCTGTTAAA GAAA TTTAACAGGGATTTT-TTA TAGATTAATCCAATT TERM 2195 1545657 - 1545697 + T 89 -13.8 -2.57092 | gap 1, opp_overlap 1545657 1545660 1545665, overlap 1545665 TAGGTTTAATTTAAA TAACAAAATCCCTGTTAAA GAAA TTTAACAGGGATTTT-TTA TAGATTAATCCAATT TERM 2196 1545695 - 1545660 - T 100 -13.6 -4.0098 | opp_overlap 1545657 1545665, overlap 1545657 1545665 GTTTAATTTAAATAA CAAAATCCCTGTTAAA GAAA TTTAACAGGGATTTTT TATAGATTAATCCAA TERM 2197 1545690 - 1545665 - T 100 -13.5 -5.011 | opp_overlap 1545665 1545657, overlap 1545660 1545657 ATTTAAATAACAAAA TCCCTGTTAAA GAAA TTTAACAGGGA TTTTTTATAGATTAA TERM 2198 1545665 - 1545690 + T 100 -13.5 -5.31456 | opp_overlap 1545660 1545657 1545665, overlap 1545657 ATTTAAATAACAAAA TCCCTGTTAAA GAAA TTTAACAGGGA TTTTTTATAGATTAA NTHI1668 1547083 - 1545719 - | hypothetical protein TERM 2199 1546475 - 1546456 - G 70 -8.6 -3.15544 | gap 1 GTTGAGCTTGATCAA CGCTGGCTG CAT CAGCCA-CG CCTTGCGCTAAACGC TERM 2200 1547111 - 1547132 + H 89 -6.5 -5.72622 | opp_overlap 1547111 TCTACGAACTAAAAA GTGCGGATG ATTT TAACCGCAC TTTTTTATTTATAAA TERM 2201 1547132 - 1547111 - H 81 -5.8 -4.90266 | opp_overlap 1547111 TCTACGAACTAAAAA GTGCGGAT GATTTT AACCGCAC TTTTTTATTTATAAA TERM 2202 1547286 - 1547310 + H 82 -8.7 -3.9504 | overlap 1547284 GTCACGCTTCTTTTT TGTTTTATCCT AGG AGGATATAACA TGTTTTATTACAATT NTHI1669 1547310 - 1547450 + | hypothetical protein NTHI1671 1547444 - 1547596 + | hypothetical protein NTHI1673 1547905 - 1548501 + | RNA polymerase sigma factor NTHI1674 1548511 - 1548684 + | hypothetical protein NTHI1675 1549681 - 1548779 - | hypothetical protein TERM 2203 1550580 - 1550591 + G 74 -5.8 -4.67608 | ATGTTGATGTCACCA CAGG AGAG CCTG TTTTCTCTTCAAATG msaB 1549817 - 1550878 + | bifunctional methionine sulfoxide reductase A/B protein TERM 2204 1551350 - 1551360 + G 72 -5.4 -4.68132 | overlap 1551336 CTGCACTTTACGGTG CATC TAT GATG TTTGTTTATGTCTTA NTHI1678 1550890 - 1551531 + | hypothetical protein NTHI1679 1551576 - 1552046 + | hypothetical protein TERM 2205 1552056 - 1552075 + T 100 -12.2 -5.39721 | opp_overlap 1552056 AAATAATGATGAAAA GCGGCTTA TTTT TAAGCCGC TTTTTTATATCCTCG TERM 2206 1552075 - 1552056 - T 100 -12.2 -4.40037 | opp_overlap 1552056 AAATAATGATGAAAA GCGGCTTA TTTT TAAGCCGC TTTTTTATATCCTCG TERM 2207 1552176 - 1552166 - T 72 -2.6 -5.29782 | TAGATTGATAAAAAA TATA TAT TATA AGCGGTATGATTTTA NTHI1680 1552551 - 1552228 - | dsDNA-mimic protein moeB 1553349 - 1552618 - | molybdopterin biosynthesis protein MoeB moeA 1554567 - 1553353 - | molybdopterin biosynthesis protein MoeA TERM 2208 1553596 - 1553613 + g 71 -4.1 -4.98255 | overlap 1553553 1553588 1553599 AATGGCTGAAAAGTG CGGTGGA TTTT TCCATTG TTTTTGTCCTTGCAG folE 1554705 - 1555361 + | GTP cyclohydrolase I TERM 2209 1555379 - 1555399 + G 100 -11.9 -5.27335 | AATGATAAATTGTAA TCCGCACGT AAA ATGTGCGGA TTTTTATTTCGGGAA NTHI1684 1555365 - 1555688 + | hypothetical protein bioD 1555791 - 1556519 + | dithiobiotin synthetase TERM 2210 1556551 - 1556572 + T 100 -13.1 -4.78848 | opp_overlap 1556554 TTTTTTAGTTTTGTA TAAGGGCGA AATA TCGCCCTTA TTTTGTGTTTGAAAA TERM 2211 1556569 - 1556554 - T 83 -10.4 -3.29511 | opp_overlap 1556551 TTTAGTTTTGTATAA GGGCGA AATA TCGCCC TTATTTTGTGTTTGA metF 1557486 - 1556608 - | 5,10-methylenetetrahydrofolate reductase TERM 2212 1557360 - 1557383 + g 90 -6.7 -5.54079 | opp_overlap 1557360 CTTTTAAACGATGAA TGGAATCCC ATAGAA GGGTTTCCA TTTTTTCGTTTTTAG rplM 1557949 - 1558377 + | 50S ribosomal protein L13 TERM 2213 1558428 - 1558411 - g 70 -4.7 -4.53034 | overlap 1558412 1558414 GGCAGAGAATCAAAA CTACGGC ACAG GCCGCCG CAAAAGCTCTTCAGC rpsI 1558394 - 1558786 + | 30S ribosomal protein S9 TERM 2214 1558835 - 1558808 - f 87 -10 -4.07568 | opp_overlap 1558813, overlap 1558813 TTTTCGTTTCCAAAA GAAAAGCAGAGA GAAA TCTCTGCTTTTT TATTATTTGAGTTAC TERM 2215 1558813 - 1558830 + F 100 -9.9 -5.72254 | opp_overlap 1558808 1558813 GTTTCCAAAAGAAAA GCAGAGA GAAA TCTCTGC TTTTTTATTATTTGA TERM 2216 1558830 - 1558813 - f 100 -9.9 -5.07652 | opp_overlap 1558813, overlap 1558808 GTTTCCAAAAGAAAA GCAGAGA GAAA TCTCTGC TTTTTTATTATTTGA sspA 1558967 - 1559605 + | stringent starvation protein A sspB 1559605 - 1560057 + | ClpXP protease specificity-enhancing factor TERM 2217 1560055 - 1560095 + T 89 -13.6 -2.59101 | opp_overlap 1560065, overlap 1560065 TTAAGAATTGTGGAT TAAGAAAAAACGCGATGA AATTA TCATCGCGTTTATTTTTA TAAATTACCTTGTTT TERM 2218 1560065 - 1560085 + T 100 -11.2 -4.97405 | opp_overlap 1560065, overlap 1560055 TGGATTAAGAAAAAA CGCGATGA AATTA TCATCGCG TTTATTTTTATAAAT TERM 2219 1560085 - 1560065 - T 100 -11.2 -5.5112 | opp_overlap 1560065 1560055 TGGATTAAGAAAAAA CGCGATGA AATTA TCATCGCG TTTATTTTTATAAAT dxs 1561970 - 1560093 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 2220 1561502 - 1561534 + g 74 -5 -4.88067 | gap 2, opp_overlap 1561508, overlap 1561509 CAAATGCCATTCCCG CAGTAATTGCGCCATC ACC GATGACGC-AT-ACTG TTTTTCTACCTGCAT TERM 2221 1561509 - 1561529 + g 76 -9.7 -3.05877 | opp_overlap 1561508, overlap 1561502 CATTCCCGCAGTAAT TGCGCCATC ACC GATGACGCA TACTGTTTTTCTACC ispA 1562902 - 1562012 - | geranyltranstransferase xseB 1563156 - 1562902 - | exodeoxyribonuclease VII small subunit thiI 1563315 - 1564772 + | thiamine biosynthesis protein ThiI NTHI1695 1564787 - 1565107 + | hypothetical protein TERM 2222 1565410 - 1565394 - g 70 -7.3 -3.71913 | overlap 1565392 TCTACAGGGAAAAGA GCGGATA GAT TATCCAC TAAAAATTCAATTGG truC 1565101 - 1565820 + | tRNA pseudouridine synthase C NTHI1697 1565813 - 1565971 + | hypothetical protein cspD 1566120 - 1566338 + | cold shock-like protein CspD TERM 2223 1566409 - 1566424 + T 82 -7.6 -4.49337 | opp_overlap 1566409 TAGAAAGTCAGTAAA GGACTA AGCT TAGTCC TTTTAGTTCGTATTA TERM 2224 1566424 - 1566409 - T 73 -7.6 -3.83169 | opp_overlap 1566409 TAGAAAGTCAGTAAA GGACTA AGCT TAGTCC TTTTAGTTCGTATTA NTHI1699 1566953 - 1566477 - | hypothetical protein usg 1567012 - 1567965 + | aspartate-semialdehyde dehydrogenase TERM 2225 1568070 - 1568108 + T 83 -8.2 -4.43307 | opp_overlap 1568081, overlap 1568078 1568081 TTAATTTTCTCGATA GCTAAAAGAAACCCGC CACAAGT GCGGGTTCTTTTTTGC TTATTTTGTTGCAGC TERM 2226 1568078 - 1568100 + T 83 -4.8 -5.43514 | opp_overlap 1568081, overlap 1568070 1568081 CTCGATAGCTAAAAG AAACCCGC CACAAGT GCGGGTTC TTTTTTGCTTATTTT TERM 2227 1568081 - 1568097 + T 80 -6.5 -4.73828 | opp_overlap 1568081, overlap 1568078 1568070 GATAGCTAAAAGAAA CCCGC CACAAGT GCGGG TTCTTTTTTGCTTAT TERM 2228 1568097 - 1568081 - T 80 -6.5 -4.70515 | opp_overlap 1568081 1568078 1568070 GATAGCTAAAAGAAA CCCGC CACAAGT GCGGG TTCTTTTTTGCTTAT trpA 1568915 - 1568109 - | tryptophan synthase subunit alpha trpB 1570108 - 1568915 - | tryptophan synthase subunit beta TERM 2229 1568972 - 1569011 + g 74 -5.2 -4.9448 | gap 1 ATCTTTATCGCCTCG TCCTGAAAGATTAACCACT AAA AGTTGTTC-TTTTTCAGGA TTTTGTTTAATCAAT TERM 2230 1570097 - 1570109 + g 73 -2.7 -5.31545 | ATAAGGGTTAAGAAG TGTGT CTG ACATA TTTTTTCCTATTATT TERM 2231 1570167 - 1570142 - R 73 -8.3 -3.53091 | ATTTTTCTTTTGAAA CGCTCATTCCT GCAA AAGATTGAGCG GTTGGCATTACTTCA NTHI1703 1570883 - 1570125 - | oxidoreductase TERM 2232 1570904 - 1570935 + H 100 -12.6 -4.4078 | CTCCTAAATCTTGAG CTTATTTGTACTAT TAAA GTAGTACAAATAAG TTTTGATTGCAAGCA purM 1571063 - 1572097 + | phosphoribosylaminoimidazole synthetase TERM 2233 1572135 - 1572116 - f 73 -7.8 -3.85567 | opp_overlap 1572117, overlap 1572117 AATCTTAAATTTAAA TTCAGCCC TTTT GGGCTGAT TTCTATAAGGAAGAA TERM 2234 1572134 - 1572117 - f 83 -11.3 -2.90617 | opp_overlap 1572117, overlap 1572116 ATCTTAAATTTAAAT TCAGCCC TTTT GGGCTGA TTTCTATAAGGAAGA TERM 2235 1572117 - 1572134 + F 93 -11.3 -4.03234 | opp_overlap 1572117 1572116 ATCTTAAATTTAAAT TCAGCCC TTTT GGGCTGA TTTCTATAAGGAAGA purN 1572152 - 1572790 + | phosphoribosylglycinamide formyltransferase TERM 2236 1572837 - 1572872 + T 86 -12.8 -2.53894 | opp_overlap 1572844, overlap 1572844 TTTATTTAATTAGGA TGTAAAAGTGCGGTGA AATT TTACCGCACTTTTAAA ATTAGTGATGATGGT TERM 2237 1572844 - 1572865 + T 100 -10.9 -4.20696 | opp_overlap 1572844, overlap 1572837 AATTAGGATGTAAAA GTGCGGTGA AATT TTACCGCAC TTTTAAAATTAGTGA TERM 2238 1572865 - 1572844 - T 85 -8.7 -4.2231 | opp_overlap 1572844 1572837 AATTAGGATGTAAAA GTGCGGTGA AATT TTACCGCAC TTTTAAAATTAGTGA NTHI1707 1573710 - 1572874 - | ABC transporter periplasmic protein TERM 2239 1573826 - 1573807 - R 70 -8 -3.1704 | AATAAAATTTTAAGA TTTGTGAT CGAG ATCACAAA ATGAAAAATACCATA TERM 2240 1573884 - 1573858 - R 77 -5.2 -5.00846 | opp_overlap 1573858 1573859, overlap 1573849 1573860 GAAATAGTATAAAAA TACCCTAAATAC AAA ATATTTAGGGCG TCTTATAAATTGAGG TERM 2241 1573882 - 1573860 - R 93 -10 -4.10552 | opp_overlap 1573859 1573858, overlap 1573858 AATAGTATAAAAATA CCCTAAATAC AAA ATATTTAGGG CGTCTTATAAATTGA uspE 1574837 - 1573908 - | universal stress protein UspE TERM 2242 1574936 - 1574952 + r 93 -12.3 -3.41807 | opp_overlap 1574936, overlap 1574931 TATCAAGCACAAAAA GGCGTGA TAT TCACGCC TTAAATTTATTTAAC TERM 2243 1574952 - 1574936 - R 100 -12.3 -4.99861 | opp_overlap 1574931 1574936 TATCAAGCACAAAAA GGCGTGA TAT TCACGCC TTAAATTTATTTAAC fnr 1575732 - 1574959 - | fumarate/nitrate reduction transcriptional regulator TERM 2244 1576041 - 1576061 + rH 77 -9.7 -3.06501 | CGAAATTGGTAGACG CAGCGGATT CAA AATCCGCCG TTGAATAAACGTGTC TERM 2245 1576110 - 1576130 + rH 100 -9.7 -5.54907 | opp_overlap 1576110 GGCACCACATACAAA CCCTTGATC GTT GGTCAGGGG TTTTTCTTTTATGCA TERM 2246 1576542 - 1576530 - gR 75 -3.3 -5.2696 | CGAAAACTCAAAAAA CTTGC CGA GCGAG AATATTTGCATTTTC NTHI1712 1576980 - 1576591 - | hypothetical protein NTHI1711 1576350 - 1576706 + | putative integrase/recombinase TERM 2247 1577014 - 1576999 - TR 93 -8.2 -5.4505 | opp_overlap 1576997 1576999 TCCTCCAATAAAAAA CCGCCC ATAA GAGCGG TGGTTTGTTAATATT NTHI1713 1577536 - 1577285 - | phage anti-repressor protein TERM 2248 1577600 - 1577566 - R 81 -8 -4.1466 | overlap 1577567 AGTTAAGTTTTAAAA CTCATCACGAACCACT GCG AATAGTTGGTGATGAA CTGAATAGGATTCGC TERM 2249 1577599 - 1577567 - R 74 -9.3 -3.08314 | overlap 1577566 GTTAAGTTTTAAAAC TCATCACGAACCACT GCG AATAGTTGGTGATGA ACTGAATAGGATTCG TERM 2250 1577746 - 1577732 - R 93 -7.1 -5.60993 | opp_overlap 1577732 1577730 GTGGCGATAAAAAAA GACGC ATTGA GCGTC TGTCTTTCCACCGCT NTHI1714 1579145 - 1577874 - | hypothetical protein TERM 2251 1579226 - 1579207 - H 72 -2.8 -5.24129 | gap 1, overlap 1579208 TTTCGGGATAAAAAA GCCCTC-GT TTT ACAGAGGGA AAAACTAAGGAACCG TERM 2252 1579824 - 1579808 - g 74 -5.1 -4.87389 | TATTTTAAAAACAAA CTCTCAA TAT TTGCGAG AAGTTAATGAGTATG NTHI1715 1579746 - 1579949 + | hypothetical protein NTHI1716 1580085 - 1579927 - | hypothetical protein TERM 2253 1580027 - 1580063 + g 90 -4.6 -5.80727 | gap 1 GCACTTTCTAATACA GCCTGTTTGAT-TAGAT TTTT ATCTTTATCAGATAGGC TTTTTTCTTGTTTTT NTHI1717 1580634 - 1580413 - | hypothetical protein TERM 2254 1580842 - 1580827 - R 86 -10.4 -3.5456 | opp_overlap 1580827, overlap 1580823 AATCTTAATAACTAA GCCCTG TTCG CAGGGC TTTTTTTCATCACAA TERM 2255 1580827 - 1580842 + r 100 -10.4 -5.52384 | opp_overlap 1580823 1580827 AATCTTAATAACTAA GCCCTG TTCG CAGGGC TTTTTTTCATCACAA TERM 2256 1580906 - 1580920 + r 73 -7.2 -3.91084 | TTTGATGTGGCTAAT TCTACT TAA AGTAGA TTTAATTGCAACTAA TERM 2257 1581110 - 1581124 + r 79 -8.5 -3.73414 | opp_overlap 1581110 TTAGGAAAAAGAAAA CCGCC ACGAA GGCGG TTTAGGTGTCATATA TERM 2258 1581124 - 1581110 - R 95 -8.5 -5.3104 | opp_overlap 1581110 TTAGGAAAAAGAAAA CCGCC ACGAA GGCGG TTTAGGTGTCATATA NTHI1718 1581896 - 1581561 - | hypothetical protein NTHI1719 1582978 - 1581899 - | hypothetical protein TERM 2259 1582190 - 1582215 + g 75 -3.3 -5.26918 | opp_overlap 1582191 1582192 1582194, overlap 1582192 TAGTCTATTCCAAAT AGCAGAAAGTA CATT TGCTTTCTGTG TTTTTTCTAGGGTAT TERM 2260 1582192 - 1582213 + g 82 -8.1 -4.26475 | opp_overlap 1582192 1582191 1582194, overlap 1582190 GTCTATTCCAAATAG CAGAAAGTA CATT TGCTTTCTG TGTTTTTTCTAGGGT TERM 2261 1582688 - 1582678 - G 73 -6.8 -4.31412 | overlap 1582679 AAACAGCTATTAAAA CGCT ACA AGCG GCAGCATCGATAATA NTHI1720 1583728 - 1583030 - | transcriptional regulator NTHI1721 1583839 - 1584027 + | hypothetical protein NTHI1722 1584076 - 1584516 + | hypothetical protein TERM 2262 1584542 - 1584522 - f 100 -8.3 -6.08342 | opp_overlap 1584519 1584522 CAAGAAATAAAAAAA GCCACGA GGAGATT TCGTGGC TAATTCATTAAGGAA TERM 2263 1584522 - 1584542 + F 76 -9.7 -2.84098 | opp_overlap 1584522, overlap 1584519 CAAGAAATAAAAAAA GCCACGAGG AGA TTTCGTGGC TAATTCATTAAGGAA TERM 2264 1584666 - 1584651 - g 75 -3.2 -5.20534 | opp_overlap 1584652 1584657 1584665, overlap 1584652 ATTAATCAATAAAAA CCACAG CGAT CTGTGT CGTTCAATCGAAAGA NTHI1723 1584565 - 1585239 + | hypothetical protein TERM 2265 1585472 - 1585461 - g 73 -4.4 -4.91473 | GAACGTAAAAATAAA GATG GTTC CATC TCAAATTTATACTTT TERM 2266 1585650 - 1585633 - g 80 -2.6 -5.54192 | ATGAACCTAAAAAAA CTACGC AAAAAA GCGAAG CCGAAATGTTGCTTG NTHI1724 1585236 - 1585994 + | hypothetical protein NTHI1725 1585979 - 1586620 + | hypothetical protein NTHI1726 1586617 - 1586841 + | hypothetical protein ninB 1586878 - 1587294 + | putative recombination protein NinB ninG 1587562 - 1587951 + | putative recombination protein NinG-like protein TERM 2267 1588559 - 1588540 - g 71 -3.7 -4.99861 | TACTAAGTATAAAAA TAGATTT GAAGTG AAATCTA CTGGAATAAGCTTAG NTHI1729 1587971 - 1588600 + | hypothetical protein NTHI1730 1588724 - 1589002 + | hypothetical protein TERM 2268 1589007 - 1589026 + T 93 -9.3 -4.42062 | opp_overlap 1589006 1589007 TTATTGCCTGAAAAG TGCGGTC TATTTT GACCGCA TTTATTTCAAGGGTA TERM 2269 1589026 - 1589007 - T 74 -9.3 -3.05046 | opp_overlap 1589007, overlap 1589006 TTATTGCCTGAAAAG TGCGGTC TATTTT GACCGCA TTTATTTCAAGGGTA NTHI1731 1590029 - 1589052 - | hypothetical protein TERM 2270 1590098 - 1590075 - H 70 -8.3 -3.17725 | opp_overlap 1590074 1590075 1590080, overlap 1590080 CTAAATTATATTTAA GTAAAGCAT TATTTT ATGCTTTAC ATTCTCAAAATTTTC TERM 2271 1590162 - 1590178 + H 78 -2.2 -5.64274 | opp_overlap 1590156 ATCAAGAACGGTAAC TCACCC CGTCA GCGTGA TTTTTTTATGCGTAA TERM 2272 1590560 - 1590534 - g 83 -10.2 -3.97051 | AAACATTGTAAAGAA GCTGGTATAGCA AAA CGCTATATCAGC TATCCAAGCGGTAGA NTHI1733 1590258 - 1591043 + | hypothetical protein TERM 2273 1591060 - 1591050 - f 74 -6.8 -4.41633 | opp_overlap 1591057, overlap 1591052 1591057 GACTTCTAAAAACAA CGGA AAA TCCG ACCGCACTTTACCGT TERM 2274 1591057 - 1591083 + F 76 -6.6 -4.59773 | gap 1, opp_overlap 1591050 1591057 1591052 AAAAACAACGGAAAA TCCGACCGCAC TTTACC GTGTGG-CGGA TTTTTACACCTCAAA NTHI1734 1591074 - 1591256 + | hypothetical protein TERM 2275 1591320 - 1591343 + F 100 -12.4 -5.4833 | AGAAAGAATTTTACA GCCCTGATCG GAAA CGGTCGGGGC TTTTTTATTGCCTAA TERM 2276 1591452 - 1591462 + G 77 -6.8 -4.64144 | CTTAGTTCTAGCTCA GCAC AGA GTGC TTTTTGGGCGTTATT NTHI1735 1591380 - 1591736 + | hypothetical protein NTHI1736 1591816 - 1592307 + | hypothetical protein NTHI1737 1592300 - 1592623 + | hypothetical protein NTHI1738 1592535 - 1592816 + | hypothetical protein NTHI1739 1593096 - 1592818 - | hypothetical protein TERM 2277 1593500 - 1593510 + G 72 -5.4 -4.56597 | opp_overlap 1593481 ACAAAGCGTTAATAC CGAA TGT TTCG TTTTTGAACCGACAG NTHI1740 1593141 - 1593653 + | hypothetical protein NTHI1741 1593640 - 1594983 + | phage terminase large subunit NTHI1742 1594985 - 1596319 + | hypothetical protein TERM 2278 1596367 - 1596391 + G 81 -3.5 -5.64274 | opp_overlap 1596367 CCGATGATGTAGAAA GAGCTATGC AACAACC GCAAGGCTC TTTTTTTATGGATGA TERM 2279 1596802 - 1596783 - g 79 -6.4 -4.85195 | AAAACAACCGAAAAA CGAGCGAT GTTT ATTGCTCG AGACCAGTCCTCAAA traN 1596348 - 1597529 + | uncharacterized protein, homolog of phage Mu protein gp30 TERM 2280 1597635 - 1597654 + F 87 -6.4 -5.46657 | opp_overlap 1597635 AGATACTAAATTCAA CTCGGC CTGAAATT GCCGAG TTTTTTATTGGGGTA TERM 2281 1597718 - 1597733 + G 79 -4.7 -5.32944 | opp_overlap 1597718 CAGCTACACAAAGAA CCATC ACTAAA GATGG TTTTTTAGTTGTGCC NTHI1744 1597675 - 1597851 + | hypothetical protein TERM 2282 1597956 - 1597977 + F 93 -8.7 -4.65916 | opp_overlap 1597956 AACCTTACCTTTAAA GTGCGGTGA AAAT TGACCGCAC TTTTCTTACAGTAAA TERM 2283 1597977 - 1597956 - f 77 -8.7 -3.5764 | opp_overlap 1597956 AACCTTACCTTTAAA GTGCGGTGA AAAT TGACCGCAC TTTTCTTACAGTAAA pyrD 1598015 - 1599034 + | dihydroorotate dehydrogenase 2 trpH 1599034 - 1599858 + | TrpH TERM 2284 1599886 - 1599924 + T 82 -5.5 -5.24129 | gap 1, opp_overlap 1599879 TGTTCAAATAATAAA TACCGGTTTCCTTGATAA TAAT TTATTG-GGAAACAGGTA TTTTTTATGGCACAA NTHI1748 1600565 - 1599957 - | hypothetical protein TERM 2285 1600640 - 1600659 + r 91 -12.2 -3.87346 | opp_overlap 1600640 AGAAATCAGTAAAAA GGCGAGTA ATTT TACTCGCC TTTGATCGTTGTAAT TERM 2286 1600659 - 1600640 - R 100 -12.2 -4.85267 | opp_overlap 1600640 AGAAATCAGTAAAAA GGCGAGTA ATTT TACTCGCC TTTGATCGTTGTAAT fumC 1602087 - 1600693 - | fumarate hydratase TERM 2287 1601697 - 1601724 + g 71 -6.4 -4.13343 | TGTTCACATCGTCAT TTGGGTGAATAA TAGA TTTTTCACCTAA TTTTCCACCGTTTAT NTHI1750 1603175 - 1602237 - | glycosyl transferase family protein TERM 2288 1602286 - 1602267 - G 100 -8.6 -5.79595 | opp_overlap 1602267 1602266 TTCCAAAAGAAAAAA TGCGGTCA AAAT TAACCGCA CTTTGACATACAAGG holC 1603831 - 1604265 + | DNA polymerase III subunit chi NTHI1754 1604350 - 1604520 + | hypothetical protein NTHI1755 1604533 - 1604907 + | hypothetical protein NTHI1756 1604935 - 1605102 + | hypothetical protein NTHI1757 1605129 - 1605443 + | hypothetical protein NTHI1758 1605487 - 1605888 + | hypothetical protein TERM 2289 1606550 - 1606527 - g 100 -11.8 -4.58466 | opp_overlap 1606531 1606535, overlap 1606531 1606535 TTTAGAAGTAGAAAA CAAAGAGAGC AAAG GCTCCCTTTG GCATTTCCGTTATCC TERM 2290 1606546 - 1606531 - g 79 -6.8 -4.82863 | opp_overlap 1606531 1606535, overlap 1606527 1606535 GAAGTAGAAAACAAA GAGAGC AAAG GCTCCC TTTGGCATTTCCGTT valS 1605940 - 1608804 + | valyl-tRNA synthetase TERM 2291 1608805 - 1608847 + T 81 -11.1 -2.87051 | opp_overlap 1608812 1608818, overlap 1608818 ATTGAGGCATTGTAA CAAAACATAAAAA-GTAGGCA TTA TGCCTACTTTTTTAT-TTTTG ATTTAATCCTAAAAA TERM 2292 1608840 - 1608812 - T 95 -11.9 -3.94438 | opp_overlap 1608805 1608818, overlap 1608818 CATTGTAACAAAACA TAAAAAGTAGGCA TTA TGCCTACTTTTTT ATTTTTGATTTAATC TERM 2293 1608818 - 1608834 + T 100 -10.9 -5.95286 | opp_overlap 1608812 1608818, overlap 1608805 AACAAAACATAAAAA GTAGGCA TTA TGCCTAC TTTTTTATTTTTGAT TERM 2294 1608834 - 1608818 - T 100 -10.9 -5.34632 | opp_overlap 1608818 1608805, overlap 1608812 AACAAAACATAAAAA GTAGGCA TTA TGCCTAC TTTTTTATTTTTGAT NTHI1762 1608946 - 1608839 - | hypothetical protein trpC 1610667 - 1609234 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 2295 1610058 - 1610031 - G 74 -8.6 -3.65522 | opp_overlap 1610054 CAGTGAGTTTAACAA CACGATTTAAAT CCAC AGTTAAATCGTG CAAGTTACGATTATT TERM 2296 1610182 - 1610162 - G 70 -7.5 -3.67611 | CCCATGCCAAGAGAA TGTGCAAGC TCT GCCAGCACA CGATAAGTTTCATCA TERM 2297 1610555 - 1610574 + g 70 -5 -4.54727 | TTTTGTTTAAATTGT GAAAGGGG AAAT TCCTTTTC TTTTGCTTTAACCCA TERM 2298 1610590 - 1610609 + g 91 -7.2 -5.24129 | opp_overlap 1610590, overlap 1610592 TTTTGCTTTAACCCA TTGTGCTT TATC AAGCACGA TTTTTTGTAGCACCG trpD 1611706 - 1610705 - | anthranilate phosphoribosyltransferase NTHI1765 1612145 - 1611759 - | hypothetical protein TERM 2299 1612182 - 1612161 - R 77 -8.7 -3.53012 | opp_overlap 1612161 TTTTTCTCCTTTAAA GTGCGGTTA AAAA TCACCGCAC TTTTTTCTGTCTTAT TERM 2300 1612161 - 1612182 + r 95 -8.7 -5.48787 | opp_overlap 1612161 TTTTTCTCCTTTAAA GTGCGGTTA AAAA TCACCGCAC TTTTTTCTGTCTTAT trpG 1612781 - 1612194 - | anthranilate synthase component II TERM 2301 1612785 - 1612772 - G 73 -2.5 -5.2853 | opp_overlap 1612772 TATCTAAAAATAAAA TATTA GCCA TAATA ATTCTTCCTTATTTT trpE 1614350 - 1612794 - | anthranilate synthase component I TERM 2302 1612915 - 1612926 + g 72 -5.8 -4.36914 | CAACCTGCTTGTACA TGGG CTAT CCCA TTTTGTACGAAAGCA TERM 2303 1613837 - 1613847 + g 76 -4 -5.23316 | TGTAATCAGGGCAGT TGAT ACC ATCA TTTTTTAATGTAATG TERM 2304 1613909 - 1613926 + g 70 -7 -3.77177 | opp_overlap 1613908 CGTAAGCAAATAATC CGCCTA AAAAAA TAGGCG TTTGGCTATGTTGAT TERM 2305 1614042 - 1614097 + g 88 -9.5 -4.66535 | gap 2, opp_overlap 1614042 1614055 1614059, overlap 1614046 1614048 1614055 AAATTGTACAGAAAA TTCGTCTTCAAAATTGACCGCACTT ATTTTTCC AAGTGCGGTTAATTTTG--GATGAA TTTCTTTTAAAACTT TERM 2306 1614097 - 1614042 - G 74 -5.8 -4.55721 | gap 2, opp_overlap 1614042 1614046 1614048 1614055, overlap 1614055 1614059 AAATTGTACAGAAAA TTCGTCTTCAAAATTGACCGCACTTA TTTTTC CAAGTGCGGTTAATTTTG--GATGAA TTTCTTTTAAAACTT TERM 2307 1614046 - 1614096 + g 90 -12.3 -3.38836 | gap 1, opp_overlap 1614042 1614055 1614059, overlap 1614042 1614048 1614055 TGTACAGAAAATTCG TC-TTCAAAATTGACCGCACTT ATTTTTCC AAGTGCGGTTAATTTTGGATGA ATTTCTTTTAAAACT TERM 2308 1614048 - 1614093 + g 100 -15.1 -2.84636 | opp_overlap 1614042 1614055 1614059, overlap 1614046 1614042 1614055 TACAGAAAATTCGTC TTCAAAATTGACCGCACTT ATTTTTCC AAGTGCGGTTAATTTTGGA TGAATTTCTTTTAAA TERM 2309 1614055 - 1614086 + g 85 -9.6 -4.22346 | opp_overlap 1614042 1614055 1614059, overlap 1614048 1614046 1614042 AATTCGTCTTCAAAA TTGACCGCACTT ATTTTTCC AAGTGCGGTTAA TTTTGGATGAATTTC TERM 2310 1614086 - 1614055 - G 79 -8.1 -4.08064 | opp_overlap 1614055 1614048 1614046 1614042, overlap 1614042 1614059 AATTCGTCTTCAAAA TTGACCGCACTTA TTTTTC CAAGTGCGGTTAA TTTTGGATGAATTTC TERM 2311 1614394 - 1614369 - R 76 -7.8 -4.07885 | TATCCTTTTGGAAAA TTTTGTACTA TTAAAC TAGTACAAAA GAAATAAGTCAAGCC TERM 2312 1615472 - 1615428 - R 83 -7.3 -4.6635 | opp_overlap 1615431 1615468, overlap 1615431 AAATTTGGAATAAAA TAATCTGGCAGACACATTATT TTA AATAAAAGATCTGCCAGATTT GATAATCTATAATTA TERM 2313 1615469 - 1615431 - R 89 -9 -4.43307 | opp_overlap 1615431 1615468, overlap 1615428 TTTGGAATAAAATAA TCTGGCAGACACATTATT TTA AATAAAAGATCTGCCAGA TTTGATAATCTATAA ftnB 1615982 - 1615485 - | ferritin ftnA 1616546 - 1615998 - | ferritin like protein 1 pstS 1616989 - 1618008 + | phosphate-binding periplasmic protein precursor PstS pstC 1618100 - 1619047 + | phosphate transport system permease protein PstC pstA 1619049 - 1619897 + | phosphate transport system permease protein PstA pstB 1619907 - 1620674 + | phosphate import ATP-binding protein PstB phoB 1620771 - 1621466 + | phosphate regulon transcriptional regulatory protein PhoB phoR 1621463 - 1622740 + | phosphate regulon sensor protein PhoR TERM 2314 1623380 - 1623405 + T 77 -9.1 -3.30771 | opp_overlap 1623382, overlap 1623382 AAAAACAACAAAAAA AAGCACGTTTT TATT AAAACGTGCTC TTCTAAAAAATGTGA TERM 2315 1623403 - 1623382 - T 100 -11.7 -6.25741 | opp_overlap 1623380 1623382 AAACAACAAAAAAAA GCACGTTTT TATT AAAACGTGC TCTTCTAAAAAATGT TERM 2316 1623382 - 1623403 + T 87 -11.7 -3.22102 | opp_overlap 1623382, overlap 1623380 AAACAACAAAAAAAA GCACGTTTT TATT AAAACGTGC TCTTCTAAAAAATGT sbcB 1624853 - 1623432 - | exonuclease I NTHI1781 1625741 - 1624866 - | hypothetical protein NTHI1782 1626653 - 1625745 - | hypothetical protein mukB 1631255 - 1626723 - | cell division protein MukB TERM 2317 1628250 - 1628227 - G 72 -6.2 -4.48987 | gap 1 TCTTCATAACCAAAA TGATGTT-TAC GTT GTACAACATCA GCTAACGCAAATACA NTHI1785 1631989 - 1631255 - | condesin subunit E haeIIR 1633051 - 1631993 - | type II restriction enzyme HaeII haeIIM 1634010 - 1633054 - | modification methylase HaeII mukF 1635450 - 1634023 - | condesin subunit F TERM 2318 1635861 - 1635850 - g 84 -4.4 -5.63517 | TTGTGAAAGAAAAAA TTCC AGAA GGAA AAACCACTTGTTCGC NTHI1789 1635507 - 1636439 + | ATPase TERM 2319 1636760 - 1636735 - g 84 -9.1 -4.51847 | overlap 1636726 1636738 AAACAAGCTACAAAA TTAGCAGGTTT GCCG AAACCTGCAAA ATGCCTATAAAAGTG TERM 2320 1636757 - 1636738 - g 80 -10.8 -3.19859 | overlap 1636726 1636735 CAAGCTACAAAATTA GCAGGTTT GCCG AAACCTGC AAAATGCCTATAAAA NTHI1790 1636441 - 1636770 + | putative dissimilatory sulfite reductase, desulfoviridin, gamma subunit mop 1636878 - 1637087 + | putative molybdenum-pterin binding protein TERM 2321 1637117 - 1637136 + F 100 -12.2 -6.11392 | opp_overlap 1637104 1637102 1637117 CAGAATTGAATATAA CCGCACTT TTAA AAGTGCGG TTTTTTTATTTCTTT TERM 2322 1637136 - 1637117 - f 91 -12.2 -3.72757 | opp_overlap 1637117, overlap 1637104 1637102 CAGAATTGAATATAA CCGCACTT TTAA AAGTGCGG TTTTTTTATTTCTTT TERM 2323 1637920 - 1637907 - f 76 -3.9 -5.31877 | ACTCAGTACAAAAAA TACTT AAAC AAGTA AGACCAGATCTTGTC TERM 2324 1638796 - 1638786 - f 73 -4 -5.1101 | overlap 1638774 TGATTATTTAAAAAA CAAT AAT ATTG CCCCGCGTTTTGTTG TERM 2325 1639071 - 1639053 - f 83 -6 -5.18726 | TCGTGATAATAAAAA TCGTATCA TAT TGAAACGA GAGACTATAAGGGAA TERM 2326 1639735 - 1639762 + F 100 -12.2 -5.49579 | gap 1 TGTCCACCAGCCCTA CTCTACGCT-AGT TTT ACTTAGCGTAGAG TTTTCTTTTTTCTAG pqqL 1639787 - 1642567 + | putative zinc protease TERM 2327 1642637 - 1642608 - T 100 -15.9 -5.14985 | opp_overlap 1642611 TGAAACAGATAAAAA TAACGGTGATCGC TTAA ACGATCACCGTTA AATTGAACTCACTGT TERM 2328 1642611 - 1642634 + T 91 -12.5 -3.18274 | opp_overlap 1642608 AACAGATAAAAATAA CGGTGATCG CTTAAA CGATCACCG TTAAATTGAACTCAC thrS 1644621 - 1642690 - | threonyl-tRNA synthetase TERM 2329 1645168 - 1645144 - g 75 -2.1 -5.37865 | opp_overlap 1645161 CGAAGAATTAAAAAA CGCACAAAC ATTGATA ATTGGTGCG CCGATGTATAATTTA acpD 1644905 - 1645489 + | acyl carrier protein phosphodiesterase TERM 2330 1645533 - 1645562 + T 93 -10.1 -4.26693 | opp_overlap 1645538, overlap 1645538 AATGTATTAAAAACA AAAAAGTGCGGTG ATTT TACCGCACTTTTC TTCTTATTTCTTTCG TERM 2331 1645538 - 1645557 + T 100 -10 -5.04082 | opp_overlap 1645538, overlap 1645533 ATTAAAAACAAAAAA GTGCGGTG ATTT TACCGCAC TTTTCTTCTTATTTC TERM 2332 1645557 - 1645538 - T 100 -9.3 -5.95286 | opp_overlap 1645538 1645533 ATTAAAAACAAAAAA GTGCGGT GATTTT ACCGCAC TTTTCTTCTTATTTC topA 1648172 - 1645566 - | DNA topoisomerase I TERM 2333 1646157 - 1646177 + g 73 -8.3 -3.6215 | ATAGCTGTCCATTGC CGTTCCACA TTT TGTGCAACG TTTACGATCCATTAA TERM 2334 1646809 - 1646823 + g 72 -5 -4.73448 | opp_overlap 1646798, overlap 1646798 GTAACTGAAGGCAAT TCTTGA TCT TCAGGA TTTTTACCTATCTGT TERM 2335 1647385 - 1647395 + g 77 -6.8 -4.64346 | overlap 1647384 TTCAGAAAATCTACC GCAC TTT GTGC TTCTTTTTGATTTTT TERM 2336 1647447 - 1647461 + g 74 -5.7 -4.81843 | ATAATCCGTAACATC CAAGC GTATA GCTTG TTTATTTTGATTATT TERM 2337 1647692 - 1647710 + g 86 -11.8 -3.79623 | opp_overlap 1647687 CCATATTTAATTGTT CAGGCTTT TCA AAAGCCTG TTTAATGGCATTTTT TERM 2338 1648963 - 1648933 - g 73 -9.8 -2.54276 | overlap 1648932 1648930 AGTGGTAAGCAATAG CGGTTTTGCCTTAT TAA ATATGGCAAAAGCG GGACTAGGTATTGCT NTHI1800 1648268 - 1649185 + | putative HTH-type transcriptional regulator TERM 2339 1649231 - 1649202 - T 100 -9.3 -5.38054 | opp_overlap 1649202 1649204, overlap 1649204 TGCTATAAATAAAAA TACCGCACTTAAG CAAC CCCAAGTGCGGTT ATTTTTATACGTGTT TERM 2340 1649229 - 1649204 - T 100 -11.9 -4.31946 | opp_overlap 1649202 1649204, overlap 1649202 CTATAAATAAAAATA CCGCACTTAAG CAAC CCCAAGTGCGG TTATTTTTATACGTG TERM 2341 1649204 - 1649229 + T 82 -7.5 -4.5448 | opp_overlap 1649204 1649202, overlap 1649202 CTATAAATAAAAATA CCGCACTTAAG CAAC CCCAAGTGCGG TTATTTTTATACGTG pntB 1650673 - 1649249 - | pyridine nucleotide transhydrogenase pntA 1652222 - 1650684 - | NAD(P) transhydrogenase subunit alpha TERM 2342 1652436 - 1652474 + r 81 -6.1 -4.92757 | opp_overlap 1652443, overlap 1652437 1652442 1652443 1652472 TACCGCACTTTCCAT AAAAAAACACCACAAGT AAAAA ACTTGTGGTGCTTTTAA TTTTATTATTAATCA TERM 2343 1652437 - 1652473 + r 82 -9.6 -3.5457 | opp_overlap 1652443, overlap 1652436 1652442 1652443 1652472 ACCGCACTTTCCATA AAAAAACACCACAAGT AAAAA ACTTGTGGTGCTTTTA ATTTTATTATTAATC TERM 2344 1652442 - 1652468 + r 100 -9.5 -4.79384 | opp_overlap 1652443, overlap 1652437 1652436 1652443 ACTTTCCATAAAAAA ACACCACAAGT AAAAA ACTTGTGGTGC TTTTAATTTTATTAT TERM 2345 1652467 - 1652443 - R 100 -13 -5.60993 | opp_overlap 1652442 1652437 1652436 1652443 CTTTCCATAAAAAAA CACCACAAGT AAAAA ACTTGTGGTG CTTTTAATTTTATTA TERM 2346 1652443 - 1652467 + r 93 -13 -3.4519 | opp_overlap 1652443, overlap 1652442 1652437 1652436 CTTTCCATAAAAAAA CACCACAAGT AAAAA ACTTGTGGTG CTTTTAATTTTATTA glgP 1654948 - 1652483 - | glycogen phosphorylase TERM 2347 1654796 - 1654782 - G 81 -10 -3.72576 | opp_overlap 1654780 1654778 CCCTCTGTTACTAAA TCACGC ACA GCGTGA AGTGTTGCATTGAGC TERM 2348 1654991 - 1655019 + r 82 -9.7 -3.54543 | opp_overlap 1654990 1655014, overlap 1654992 AAATGATTAACGTAG GGTGTGTGAATTT TCA AAATTCACGCACG TTTGCAAAAATCAAT TERM 2349 1654992 - 1655018 + r 87 -13.2 -2.72511 | opp_overlap 1654990 1655014, overlap 1654991 AATGATTAACGTAGG GTGTGTGAATTT TCA AAATTCACGCAC GTTTGCAAAAATCAA TERM 2350 1655177 - 1655122 - R 83 -6.3 -5.0133 | gap 1, opp_overlap 1655131 1655132 1655134, overlap 1655125 1655126 1655128 1655131 TATCTTTGCAAAAAA CAAGCACAACCACACCGCTTGCAAAA TATTC TTTCACAAGCGGTGTGATTGTTAA-G AAAGTTTACGAATAA TERM 2351 1655175 - 1655125 - R 100 -13.5 -4.61482 | opp_overlap 1655131 1655132 1655134, overlap 1655122 1655126 1655128 1655131 CTTTGCAAAAAACAA GCACAACCACACCGCTTGCAAAA TATTC TTTCACAAGCGGTGTGATTGTTA AGAAAGTTTACGAAT TERM 2352 1655174 - 1655126 - R 100 -17 -3.36166 | opp_overlap 1655131 1655132 1655134, overlap 1655125 1655122 1655128 1655131 TTTGCAAAAAACAAG CACAACCACACCGCTTGCAAAA TATTC TTTCACAAGCGGTGTGATTGTT AAGAAAGTTTACGAA TERM 2353 1655172 - 1655128 - R 100 -19.6 -3.23795 | opp_overlap 1655131 1655132 1655134, overlap 1655126 1655125 1655122 1655131 TGCAAAAAACAAGCA CAACCACACCGCTTGCAAAA TATTC TTTCACAAGCGGTGTGATTG TTAAGAAAGTTTACG TERM 2354 1655169 - 1655131 - R 100 -15.5 -3.72181 | opp_overlap 1655131 1655132 1655134, overlap 1655128 1655126 1655125 1655122 AAAAAACAAGCACAA CCACACCGCTTGCAAAA TATTC TTTCACAAGCGGTGTGA TTGTTAAGAAAGTTT TERM 2355 1655131 - 1655169 + r 77 -8.9 -3.6279 | opp_overlap 1655131 1655128 1655126 1655125 1655122, overlap 1655132 1655134 AAAAAACAAGCACAA CCACACCGCTTGCAAAA TATTC TTTCACAAGCGGTGTGA TTGTTAAGAAAGTTT TERM 2356 1655132 - 1655168 + r 86 -12.4 -2.77192 | opp_overlap 1655131 1655128 1655126 1655125 1655122, overlap 1655131 1655134 AAAAACAAGCACAAC CACACCGCTTGCAAAA TATTC TTTCACAAGCGGTGTG ATTGTTAAGAAAGTT TERM 2357 1655134 - 1655166 + r 73 -9.2 -2.93073 | opp_overlap 1655131 1655128 1655126 1655125 1655122, overlap 1655132 1655131 AAACAAGCACAACCA CACCGCTTGCAAAA TATTC TTTCACAAGCGGTG TGATTGTTAAGAAAG glgA 1656625 - 1655195 - | glycogen synthase TERM 2358 1655449 - 1655427 - G 73 -8.5 -3.55563 | opp_overlap 1655447, overlap 1655446 1655447 ACCGTATCCGCTAAA CCACCTGTT TTACG AACAAGTGG CAGTGTGCCATATTG TERM 2359 1656702 - 1656723 + r 100 -10.9 -4.28994 | opp_overlap 1656702 AGAGGGATTCAGAAA GTGCGGTTA ATTT TGACCGCAC TTTTCCTAACTAATC TERM 2360 1656723 - 1656702 - R 82 -8.7 -3.93136 | opp_overlap 1656702 AGAGGGATTCAGAAA GTGCGGTTA ATTT TGACCGCAC TTTTCCTAACTAATC glgC 1658067 - 1656733 - | glucose-1-phosphate adenylyltransferase glgX 1660033 - 1658057 - | glycogen operon protein GlgX TERM 2361 1658544 - 1658565 + g 85 -7.3 -5.09426 | opp_overlap 1658544, overlap 1658525 CCACTTTGTGCAAAA GTGCGGT TATTTTCC ACCGCAC TTTTTTGCGGTTCAG TERM 2362 1658565 - 1658544 - G 73 -7.3 -4.08216 | opp_overlap 1658525 1658544 CCACTTTGTGCAAAA GTGCGGT TATTTTCC ACCGCAC TTTTTTGCGGTTCAG glgB 1662324 - 1660132 - | glycogen branching enzyme malQ 1664433 - 1662334 - | 4-alpha-glucanotransferase TERM 2363 1662995 - 1663007 + g 70 -2.6 -5.0925 | TAATGCACATAAGCA CCGT CAGCC GCGG TTTTTCCTTTTGGAA TERM 2364 1663546 - 1663531 - G 70 -7.6 -3.62522 | opp_overlap 1663530 1663531 1663542 TAAGCCCTGTAACAA CAAAGG TTCC CCTTTG CTTTTTAAATAATCA NTHI1811 1664959 - 1664495 - | hypothetical protein TERM 2365 1664978 - 1665010 + r 100 -14.4 -3.45634 | gap 1, opp_overlap 1664978 TGATACAAATAAAAA GTGCGGTCAAAATCA CGTT TG-TTTTGACCGCAC TTGGTTGATTAAAAT TERM 2366 1665010 - 1664978 - R 100 -14.4 -5.42975 | gap 1, opp_overlap 1664978 TGATACAAATAAAAA GTGCGGTCAAAATCA CGTT TG-TTTTGACCGCAC TTGGTTGATTAAAAT glnS 1666698 - 1665025 - | glutaminyl-tRNA synthetase TERM 2367 1665643 - 1665655 + g 72 -5.5 -4.56914 | ATCAATCACTGCCAT TGCGC GTG GTGCA TTTTCATTTAAATCC TERM 2368 1665803 - 1665826 + g 73 -9.6 -2.92924 | opp_overlap 1665792, overlap 1665802 GAAATGGTTGGCATA CGTGGATCGT TCCA ACCATCCACG ATTTCATCATTTACC TERM 2369 1666852 - 1666830 - R 100 -11.3 -5.24531 | opp_overlap 1666830, overlap 1666831 ACTTGCCATAAAAAA CCGCCACGA AATTA TCGTGGCGA TGTATAAATGCACAA TERM 2370 1666830 - 1666852 + r 73 -9.1 -2.91264 | opp_overlap 1666830 1666831 ACTTGCCATAAAAAA CCGCCACGA AATTA TCGTGGCGA TGTATAAATGCACAA TERM 2371 1666851 - 1666831 - R 95 -12.6 -3.73995 | opp_overlap 1666830, overlap 1666830 CTTGCCATAAAAAAC CGCCACGA AATTA TCGTGGCG ATGTATAAATGCACA TERM 2372 1667069 - 1667101 + r 100 -10.7 -4.1822 | opp_overlap 1667069 TTTTATAAATAAAAA GTGCGGTGAAAGTCT CAA AAATTTTTACCGCAC TTTATTGAAATAGAG TERM 2373 1667101 - 1667069 - R 95 -8.5 -5.38054 | opp_overlap 1667069 TTTTATAAATAAAAA GTGCGGTGAAAGTCT CAA AAATTTTTACCGCAC TTTATTGAAATAGAG cafA 1668593 - 1667118 - | ribonuclease G TERM 2374 1669098 - 1669113 + G 75 -3.3 -5.34055 | AAAACTTGTTTCTGC CACTA TTATTT TAGTG TTTTTTACTATTTAT putP 1668709 - 1670223 + | sodium/proline symporter TERM 2375 1670419 - 1670398 - g 86 -8.7 -4.69027 | opp_overlap 1670398 AAATCGATCTAAAAA GTGCGGTGA AATC TGACCGCAC TTTTCCCCTTTCAGA TERM 2376 1670398 - 1670419 + G 83 -8.7 -4.24002 | opp_overlap 1670398 AAATCGATCTAAAAA GTGCGGTGA AATC TGACCGCAC TTTTCCCCTTTCAGA TERM 2377 1671023 - 1671009 - g 79 -6.4 -4.84017 | opp_overlap 1671008 AACTGGCTAGAAAAA GTTGGC TTT ACCAAC GTACGTTGTGTGGAT NTHI1815 1670220 - 1671185 + | hypothetical protein TERM 2378 1671213 - 1671179 - T 73 -7.4 -3.76492 | opp_overlap 1671184 1671190, overlap 1671190 GGTAATTTTAGCAAA TAAATAAAAAAGGAAA TTA TTTCCTTTTTATTTTA CTCGCGTTTCATATT TERM 2379 1671184 - 1671208 + T 78 -7.3 -4.29432 | opp_overlap 1671179 1671190, overlap 1671190 TTTTAGCAAATAAAT AAAAAAGGAAA TTA TTTCCTTTTTA TTTTACTCGCGTTTC TERM 2380 1671202 - 1671190 - T 95 -6.3 -5.85425 | opp_overlap 1671184 1671190, overlap 1671179 CAAATAAATAAAAAA GGAAA TTA TTTCC TTTTTATTTTACTCG TERM 2381 1671190 - 1671202 + T 87 -6.3 -5.50723 | opp_overlap 1671190 1671179, overlap 1671184 CAAATAAATAAAAAA GGAAA TTA TTTCC TTTTTATTTTACTCG cdd 1672106 - 1671228 - | cytidine deaminase NTHI1817 1672380 - 1672862 + | DNA-binding ferritin-like protein TERM 2382 1672900 - 1672927 + T 85 -8.7 -4.18042 | opp_overlap 1672904 AAAACTAACCTGCAA TTAATCTAACT CAATAA AGTTAGATTAA TTTAATTTGTCTAAG TERM 2383 1673314 - 1673295 - T 100 -12.2 -5.75478 | AATTAGATAAAAAAA GCCCCTAA ATAA TTAGGGGC ATTAAAAAGGAATTT pepT 1674672 - 1673434 - | peptidase T TERM 2384 1674897 - 1674912 + H 95 -9 -5.02323 | TTTTTATATGTCGCC CCTGCA GTCT TGCAGG TTTTATTTCTACTCA TERM 2385 1675106 - 1675122 + G 88 -10.9 -4.21768 | TCTTGGCCCTTCAGG CTGTGGT AAG ACCACAG TTTTACGCTTACTTG TERM 2386 1676011 - 1675994 - g 70 -8.5 -3.24032 | overlap 1675992 ATTCTTTAATGAAGA TGATCCA CATA TGGATCA TAGCATAGGACAACG potA 1674942 - 1676087 + | putrescine/spermidine ABC transporter ATPase protein potB 1676071 - 1676931 + | spermidine/putrescine ABC transporter membrane protein potC 1676931 - 1677701 + | spermidine/putrescine ABC transporter membrane protein TERM 2387 1677723 - 1677711 - f 80 -6.3 -4.80178 | opp_overlap 1677711 CATTAATTAACAAAA GGTTT CAC AAACC TTTGAATTTAAAATA TERM 2388 1677768 - 1677742 - f 73 -7.3 -3.99228 | opp_overlap 1677744 1677763, overlap 1677737 1677744 GAATTTAAAATAGAA TACGCCTTGAC GCACA ATCAAGGCGTT TTTTTATGCCTGTCA TERM 2389 1677744 - 1677766 + F 100 -9.2 -5.65177 | opp_overlap 1677742 1677737 1677744, overlap 1677763 ATTTAAAATAGAATA CGCCTTGA CGCACAA TCAAGGCG TTTTTTTATGCCTGT TERM 2390 1677766 - 1677744 - f 82 -9.9 -3.5698 | opp_overlap 1677744 1677763, overlap 1677742 1677737 ATTTAAAATAGAATA CGCCTTGAC GCACA ATCAAGGCG TTTTTTTATGCCTGT potD1 1677748 - 1678914 + | spermidine/putrescine-binding periplasmic protein 1 precursor TERM 2391 1678971 - 1678990 + T 88 -7.8 -5.12707 | opp_overlap 1678974, overlap 1678974 ATTTCCTCTAAATAA AAACGCCC TTTC GGGCGTTA TTTTTTAAGCTTTAC TERM 2392 1678974 - 1678987 + T 93 -9.5 -4.63993 | opp_overlap 1678974, overlap 1678971 TCCTCTAAATAAAAA CGCCC TTTC GGGCG TTATTTTTTAAGCTT TERM 2393 1678987 - 1678974 - T 100 -9.5 -5.27335 | opp_overlap 1678974 1678971 TCCTCTAAATAAAAA CGCCC TTTC GGGCG TTATTTTTTAAGCTT uupA 1680938 - 1678995 - | ABC transporter ATPase component TERM 2394 1679254 - 1679275 + g 88 -8.7 -4.70107 | opp_overlap 1679254 GATTTCGGCTTAGAA GTGCGGTCA TTTT TCACCGCAC TTTCTTCTTTTAGTG TERM 2395 1679275 - 1679254 - G 72 -8.7 -3.28924 | opp_overlap 1679254 GATTTCGGCTTAGAA GTGCGGTCA TTTT TCACCGCAC TTTCTTCTTTTAGTG TERM 2396 1680332 - 1680320 - G 72 -7.7 -3.82628 | overlap 1680318 CATGGGAAATAAATA CAAGG CTA CCTTG GAAATCCAGTAAGAA TERM 2397 1681019 - 1681001 - R 84 -6 -5.24129 | opp_overlap 1681001 1681016 GGTTTGCATAAAAAA TCCCATCA ATT CAATGGGA TTCTCTCTTAAATCA NTHI1825 1682417 - 1681032 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 2398 1682317 - 1682285 - G 83 -9.1 -4.3208 | opp_overlap 1682286, overlap 1682271 1682286 CGGCAGAATGTAAAA TTCGCCCACGATCCC GAC GAAATGGTGGGCGAT TATCTTTTTCGCGTG TERM 2399 1682316 - 1682286 - G 91 -12.6 -3.18766 | opp_overlap 1682286, overlap 1682271 1682285 GGCAGAATGTAAAAT TCGCCCACGATCCC GAC GAAATGGTGGGCGA TTATCTTTTTCGCGT TERM 2400 1682286 - 1682316 + g 79 -8.2 -4.08349 | opp_overlap 1682271 1682286 1682285 GGCAGAATGTAAAAT TCGCCCACGATCCC GAC GAAATGGTGGGCGA TTATCTTTTTCGCGT TERM 2401 1682494 - 1682442 - R 88 -7.9 -5.05782 | opp_overlap 1682442 ATTTAGCGCAAAAAA CAACCGCACTTTATCTATAACAAAC AAA ATCTAGAATGAATAAAGTGCGGTTG AATTTTTATTGATAT NTHI1826 1683205 - 1682510 - | putative effector of murein hydrolase TERM 2402 1682799 - 1682824 + g 83 -11.3 -3.64822 | opp_overlap 1682788 1682798 1682797 AAATGACGGGAAACT TCCATCGCAAT AGGC ATTGTGATGGA TTTAGGTAAAACCGT NTHI1827 1683646 - 1683224 - | hypothetical protein NTHI1828 1683761 - 1684243 + | micrococcal nuclease-like protein nifS 1684245 - 1685444 + | putative selenocysteine lyase NTHI1830 1685441 - 1685821 + | hypothetical protein NTHI1831 1685812 - 1686609 + | hypothetical protein TERM 2403 1686918 - 1686904 - g 72 -5.8 -4.37711 | opp_overlap 1686917 TTATCAAAGCCAAAA TTTGAT TGA ATCAAA AAGTTTTAAACTTTA TERM 2404 1687060 - 1687077 + G 71 -8.5 -3.53761 | AGTGGCAGTTTATGA TGCTCAA AAAA TTGAGCA TTTACAAGGCGATTG queF 1686653 - 1687492 + | 7-cyano-7-deazaguanine reductase TERM 2405 1687518 - 1687497 - T 95 -8.7 -5.24989 | opp_overlap 1687497 1687498, overlap 1687498 CGAGACAGTAAAAAA CTGCGGTGA AATT TCACCGCAC TTTTCTCTACCCTTG TERM 2406 1687497 - 1687518 + T 89 -8.7 -4.55118 | opp_overlap 1687497 1687498, overlap 1687498 CGAGACAGTAAAAAA CTGCGGTGA AATT TCACCGCAC TTTTCTCTACCCTTG TERM 2407 1687517 - 1687498 - T 91 -12.2 -3.73909 | opp_overlap 1687497 1687498, overlap 1687497 GAGACAGTAAAAAAC TGCGGTGA AATT TCACCGCA CTTTTCTCTACCCTT TERM 2408 1687498 - 1687517 + T 89 -12.2 -3.32348 | opp_overlap 1687498 1687497, overlap 1687497 GAGACAGTAAAAAAC TGCGGTGA AATT TCACCGCA CTTTTCTCTACCCTT tyrA 1688649 - 1687525 - | bifunctional chorismate mutase/prephenate dehydrogenase truB 1689659 - 1688739 - | tRNA pseudouridine synthase B rbfA 1690045 - 1689659 - | ribosome-binding factor A hsdM3 1690210 - 1691880 + | putative type I restriction enzyme HindVIIP M protein TERM 2409 1692203 - 1692168 - g 100 -15 -3.33492 | opp_overlap 1692175 GTATTGATTTCACAA GTTTTAATGTAGGAAC AGGT GTTCCTACATTAAATC GAAACCATTTATCAA TERM 2410 1692175 - 1692196 + G 83 -11.7 -3.05463 | opp_overlap 1692168 TTTCACAAGTTTTAA TGTAGGAAC AGGT GTTCCTACA TTAAATCGAAACCAT hsdS3 1691873 - 1693138 + | putative type I restriction enzyme HindVIIP specificity protein TERM 2411 1693639 - 1693649 + G 73 -2.6 -5.19212 | ATGGTGTAATTTGCC TTTT ACC AAAA TTTTTTAATAATACT NTHI1841 1693131 - 1694177 + | hypothetical protein TERM 2412 1696559 - 1696543 - g 76 -5.1 -5.09895 | GAGCCACGCAAAAAA GCCTTTT TGA AAACGGC AGGCTTGGTAAAAAA TERM 2413 1696986 - 1696960 - g 81 -10.3 -3.3903 | opp_overlap 1696956, overlap 1696948 GAAGCATTGAATCAA TACCACAATCA CAATT TGACTGTGGTA GAGATTTTGGACGAA hsdR3 1694179 - 1697346 + | putative type I restriction enzyme HindVIIP R protein TERM 2414 1697408 - 1697375 - T 100 -12.7 -4.91084 | gap 1, opp_overlap 1697375 1697407 TATTTAATAACAAAA GGGCGATTAAAAA-CA CTA TGATTTTTAACCGCCC TTTATTTTGTTAAAG TERM 2415 1697375 - 1697408 + T 100 -10.5 -4.87892 | gap 1, opp_overlap 1697375, overlap 1697407 TATTTAATAACAAAA GGGCGATTAAAAA-CA CTA TGATTTTTAACCGCCC TTTATTTTGTTAAAG infB 1699959 - 1697425 - | translation initiation factor IF-2 TERM 2416 1699108 - 1699124 + g 70 -5.1 -4.64334 | CACTTTAATGATTTC TGTCGCT TTC ACCGACA TTTTGTTCGCAAGTT TERM 2417 1699288 - 1699300 + g 74 -4.8 -4.98616 | ACGATTAGATTCGCG CTCG TTTTT CGAG TTTTTGCTATTTTCA nusA 1701458 - 1699971 - | transcription elongation factor NusA NTHI1846 1701930 - 1701475 - | hypothetical protein TERM 2418 1702088 - 1702063 - R 100 -10.5 -5.64274 | opp_overlap 1702062 1702061 TCAGGCATAAAAAAA GGGTTAGGTTC ATAA GAACCTAAGCC CAGTTACTAAATTTC TERM 2419 1702114 - 1702133 + r 74 -6.4 -4.28762 | opp_overlap 1702117, overlap 1702117 ATTTCTTATAGAAAA AAACCCCA AAAC TGGGGTTC TTTTACTGAACTTAT TERM 2420 1702130 - 1702117 - R 93 -8.1 -5.71712 | opp_overlap 1702114 1702117 TCTTATAGAAAAAAA CCCCA AAAC TGGGG TTCTTTTACTGAACT TERM 2421 1702117 - 1702130 + r 81 -8.1 -4.25658 | opp_overlap 1702117, overlap 1702114 TCTTATAGAAAAAAA CCCCA AAAC TGGGG TTCTTTTACTGAACT TERM 2422 1702468 - 1702441 - R 73 -4.2 -4.92756 | ATCATCAAAAATAAA GCGTGAAATAAT GCCA ATTAATTAACGC CATTATCAAGCCTCC TERM 2423 1702758 - 1702743 - R 77 -3.2 -5.49809 | overlap 1702745 TAAACCGCAAAAAAA TAGTCG CAAA CGACGA ACAATACGCTTTAGC TERM 2424 1702756 - 1702745 - R 72 -5.8 -4.36993 | overlap 1702743 AACCGCAAAAAAATA GTCG CAAA CGAC GAACAATACGCTTTA TERM 2425 1703554 - 1703529 - R 71 -5.3 -4.62203 | opp_overlap 1703532, overlap 1703532 GTTAAACAAGCAAAA GAAGGCGGGGC TAAA ACCTCGCCTTT TGCTTTTATTGAAAT TERM 2426 1703532 - 1703551 + r 93 -8.5 -4.78029 | opp_overlap 1703529 1703532 AAACAAGCAAAAGAA GGCGGGG CTAAAA CCTCGCC TTTTGCTTTTATTGA TERM 2427 1703551 - 1703532 - R 78 -7 -4.39448 | opp_overlap 1703532, overlap 1703529 AAACAAGCAAAAGAA GGCGGGGC TAAA ACCTCGCC TTTTGCTTTTATTGA NTHI1849 1704355 - 1703591 - | hypothetical protein TERM 2428 1704229 - 1704240 + g 73 -7.2 -4.16943 | AAGCACGTTGTTTGT CGGC TTCT GCCG TTTTCCAATCTAACA NTHI1850 1704886 - 1704359 - | hypothetical protein NTHI1851 1706035 - 1704896 - | hypothetical protein TERM 2429 1705442 - 1705428 - G 71 -6.4 -4.03978 | AATTGTCGAGATAAA TCCCCA ACG TGGGAA AGCCCAAAATTTGCC TERM 2430 1706010 - 1706026 + g 79 -6.5 -4.75174 | opp_overlap 1706007 GAATCAGAATCACTA GCTCGCT CAT AGCCAGC TTTTTCCATTGACTC NTHI1852 1706420 - 1706052 - | hypothetical protein NTHI1853 1707255 - 1706434 - | hypothetical protein NTHI1855 1707815 - 1707312 - | hypothetical protein TERM 2431 1707756 - 1707769 + g 100 -8.1 -5.59564 | overlap 1707733 TGCCAAAAGTGCGTT CGGGT TTTT ACCCG TTTTTTTACCTTTGT NTHI1856 1708414 - 1707812 - | hypothetical protein TERM 2432 1708367 - 1708393 + g 71 -6.8 -4.09685 | opp_overlap 1708389 GTTTTGCGGAATAGG GAAAATTTGA TAACTAT TCAAATTTTC TTTTAAAAAATAGAC NTHI1857 1710948 - 1708426 - | tail fiber protein TERM 2433 1708720 - 1708698 - G 77 -6.4 -4.68545 | opp_overlap 1708701, overlap 1708701 ACTGAAGATACAAAA TAAGTGTTTT ACC AAAACACTTT TCTGAAATATTAATA TERM 2434 1708701 - 1708717 + g 83 -8.1 -4.42619 | opp_overlap 1708701 1708698 GAAGATACAAAATAA GTGTTTT ACC AAAACAC TTTTCTGAAATATTA TERM 2435 1708717 - 1708701 - G 83 -8.1 -4.43832 | opp_overlap 1708701, overlap 1708698 GAAGATACAAAATAA GTGTTTT ACC AAAACAC TTTTCTGAAATATTA TERM 2436 1709567 - 1709555 - G 73 -4.1 -5.1101 | TCAGCACGTAAAAAA CCAAC GGG ATTGG TTACCGCACGAGGGA TERM 2437 1710074 - 1710089 + g 70 -4.8 -4.57569 | TAATGCTGGCTGTCT GAAATA CGGA TATTTC TTTTTGCCACAATAC NTHI1858 1711493 - 1710957 - | bacteriophage P2-related tail formation protein gpI NTHI1860 1712397 - 1711483 - | phage-related baseplate assembly protein TERM 2438 1712169 - 1712185 + g 84 -8.7 -4.46112 | overlap 1712158 ACATTGTGGCTTTTG CCGCATT GTT GATGCGG TTTCTTTCCATCAAC NTHI1861 1712732 - 1712394 - | baseplate assembly protein W NTHI1862 1713333 - 1712734 - | phage P2-like baseplate assembly protein TERM 2439 1712915 - 1712945 + g 85 -10.6 -3.90112 | ATATTCACATTACCT TTGATATTGATAGC GGG GCAGTCAATATCAA TTTGATTAGCGGCAG TERM 2440 1713420 - 1713431 + r 73 -7.2 -4.03179 | opp_overlap 1713420 GTAGGTAACAAAAAA GGGC TTTC GCCC TTTGATTATGCTCTG TERM 2441 1713431 - 1713420 - R 93 -7.2 -5.4833 | opp_overlap 1713420 GTAGGTAACAAAAAA GGGC TTTC GCCC TTTGATTATGCTCTG NTHI1863 1713865 - 1713437 - | hypothetical protein TERM 2442 1713806 - 1713841 + g 74 -7.7 -3.9693 | opp_overlap 1713815, overlap 1713815 CATGGCTTGAATGTC TTTAAAAAAGGGCGT GTTTAA ACGCCCTTCTTGAAA TTGTTTCGATAACTC TERM 2443 1713815 - 1713832 + g 75 -8.4 -3.71353 | opp_overlap 1713815, overlap 1713806 AATGTCTTTAAAAAA GGGCGT GTTTAA ACGCCC TTCTTGAAATTGTTT TERM 2444 1713832 - 1713815 - G 90 -8.4 -5.01732 | opp_overlap 1713806 1713815 AATGTCTTTAAAAAA GGGCGT GTTTAA ACGCCC TTCTTGAAATTGTTT NTHI1864 1714431 - 1713874 - | hypothetical protein TERM 2445 1714510 - 1714531 + r 93 -7.3 -5.4833 | opp_overlap 1714515, overlap 1714515 CTACAATGTGCAACA AAAAAGGGC TTTC GCCCTTTTA TTTTTTATTACCTAA TERM 2446 1714515 - 1714526 + r 93 -7.2 -5.55001 | opp_overlap 1714515, overlap 1714510 ATGTGCAACAAAAAA GGGC TTTC GCCC TTTTATTTTTTATTA TERM 2447 1714526 - 1714515 - R 93 -7.2 -5.45652 | opp_overlap 1714515 1714510 ATGTGCAACAAAAAA GGGC TTTC GCCC TTTTATTTTTTATTA NTHI1865 1714981 - 1714529 - | hypothetical protein TERM 2448 1714581 - 1714600 + g 85 -5.8 -5.47964 | overlap 1714572 CGTTTACGAATATCT TTCATTCG TTGT TGAATGAA TTTTTCTTCTTTTGT NTHI1866 1715159 - 1714959 - | hypothetical protein TERM 2449 1715197 - 1715186 - R 93 -7.2 -5.74288 | opp_overlap 1715181 1715186 ATAAACAACAAAAAA GGGC TTTC GCCC TTTTATTATGCTCTG TERM 2450 1715186 - 1715197 + r 83 -7.2 -4.82819 | opp_overlap 1715186, overlap 1715181 ATAAACAACAAAAAA GGGC TTTC GCCC TTTTATTATGCTCTG NTHI1867 1717167 - 1715203 - | phage-related tail protein NTHI1869 1717977 - 1717210 - | hypothetical protein TERM 2451 1717512 - 1717522 + g 71 -3.2 -5.04175 | TAATTTGATCCGTCG CACT TTT GGTG TTTTTCTGTAGTTCC TERM 2452 1717817 - 1717831 + g 76 -7.1 -4.29953 | GCATATTGTTTCATT GCAGC TTGAT GCTGC TTATTTTGCTGATTT NTHI1870 1718022 - 1718360 + | hypothetical protein NTHI1871 1718553 - 1718371 - | hypothetical protein NTHI1872 1718657 - 1719004 + | hypothetical protein NTHI1873 1719466 - 1719005 - | bacteriophage tail completion protein gpS-like protein NTHI1874 1719852 - 1719466 - | bacteriophage tail completion protein gpR-like protein TERM 2453 1719839 - 1719874 + g 70 -2.5 -5.02074 | overlap 1719841 1719841 CCCGTTGCGACGATT TGCCCACCGTCCACA TAAAGT TGTAGATGGTCGGGA TTTTTTACAAAATCG NTHI1875 1720009 - 1719902 - | hypothetical protein NTHI1876 1720164 - 1720042 - | hypothetical protein NTHI1878 1720376 - 1720161 - | DnaK suppressor protein NTHI1879 1720901 - 1720551 - | hypothetical protein NTHI1880 1721404 - 1720886 - | phage-related lysozyme NTHI1881 1721618 - 1721397 - | hypothetical protein TERM 2454 1721492 - 1721481 - G 70 -5.8 -4.35604 | overlap 1721483 CCAATTTACAAGAAA GGTG GCGA CACC AATCACAATACCTGT NTHI1882 1721829 - 1721620 - | hypothetical protein NTHI1883 1722335 - 1721829 - | hypothetical protein TERM 2455 1722584 - 1722574 - R 72 -2.6 -5.38549 | overlap 1722568 CTCAAACAAGAAAAA TTTT CCT AAAA ATGCCAAGTCGGTCA NTHI1884 1723279 - 1722629 - | terminase, endonuclease subunit TERM 2456 1723096 - 1723106 + g 72 -5.4 -4.66163 | ATGGTAGATAGTCAG GCAA AAT TTGC TTTTTAAATGCGCCT NTHI1885 1724340 - 1723291 - | major capsid protein NTHI1887 1725176 - 1724361 - | capsid scaffolding protein NTHI1888 1725341 - 1727122 + | terminase, ATPase subunit NTHI1890 1727132 - 1728142 + | portal vertex protein TERM 2457 1728164 - 1728179 + T 91 -4.6 -5.86061 | opp_overlap 1728164 TTCAAAAATAAACAG CCCGCA GAAA TTCGGG TTTTTTTTGCTAAAA siaB 1729524 - 1728850 - | acylneuraminate cytidylyltransferase NTHI1892 1729638 - 1730300 + | putative NAD(P)H nitroreductase TERM 2458 1730313 - 1730338 + T 93 -7.5 -5.4148 | opp_overlap 1730305 1730317, overlap 1730315 1730317 TAAAAATCCCATTAA AAAAGGGCTGC AAAT GCAGCCCTATC TTTTTTGATTATTTC TERM 2459 1730315 - 1730336 + T 100 -10.1 -4.30543 | opp_overlap 1730305 1730317, overlap 1730313 1730317 AAAATCCCATTAAAA AAGGGCTGC AAAT GCAGCCCTA TCTTTTTTGATTATT TERM 2460 1730334 - 1730317 - T 100 -12.7 -5.16237 | opp_overlap 1730317 1730315 1730313, overlap 1730305 AATCCCATTAAAAAA GGGCTGC AAAT GCAGCCC TATCTTTTTTGATTA TERM 2461 1730317 - 1730334 + T 95 -12.7 -3.71857 | opp_overlap 1730305 1730317, overlap 1730315 1730313 AATCCCATTAAAAAA GGGCTGC AAAT GCAGCCC TATCTTTTTTGATTA mrp 1731459 - 1730347 - | putative ATPase TERM 2462 1733273 - 1733248 - g 76 -6.9 -4.21141 | GTGGAAGAAACTAAA GCCTTATTTGC CGCA GCCAATAAAGC AGCAGAAAAAACAGA metG 1731610 - 1733658 + | methionyl-tRNA synthetase TERM 2463 1733693 - 1733675 - f 81 -11 -2.85784 | opp_overlap 1733675, overlap 1733672 CAATTCAATTAATTA GGGCAACA TTA CGTTGCCC TTTTATTTTCTTGTT TERM 2464 1733675 - 1733693 + F 100 -10.3 -5.33124 | opp_overlap 1733672 1733675 CAATTCAATTAATTA GGGCAAC ATTAC GTTGCCC TTTTATTTTCTTGTT tehB 1733769 - 1734629 + | tellurite resistance protein TehB gloB 1735374 - 1734673 - | hydroxyacylglutathione hydrolase NTHI1897 1736232 - 1735426 - | hypothetical protein TERM 2465 1736123 - 1736136 + g 72 -2.3 -5.28826 | CCGACCAAATTTTCT GCCAT TTTC ACGGC TTTTTTATCCCATTT TERM 2466 1736289 - 1736319 + H 77 -5.6 -5.00616 | TTTGGACGAAGTGCG GTTAAAATGGTAAG CGT TTTTTCATTTTAAC TTTTTTAAAAACGAG NTHI1898 1736468 - 1736944 + | hypothetical protein TERM 2467 1736998 - 1736981 - f 81 -7.7 -4.37658 | opp_overlap 1736981 1736982, overlap 1736982 AAGTGCGGTAGAAAA CCCCGAA GTTT TTCGGGA TTTATTTTTGCCGAA TERM 2468 1736981 - 1736998 + F 77 -5.5 -4.85782 | opp_overlap 1736981 1736982, overlap 1736982 AAGTGCGGTAGAAAA CCCCGAA GTTT TTCGGGA TTTATTTTTGCCGAA TERM 2469 1736982 - 1736997 + F 75 -9 -3.50746 | opp_overlap 1736981 1736982, overlap 1736981 AGTGCGGTAGAAAAC CCCGAA GTTT TTCGGG ATTTATTTTTGCCGA TERM 2470 1736997 - 1736982 - f 73 -9 -3.22113 | opp_overlap 1736982 1736981, overlap 1736981 AGTGCGGTAGAAAAC CCCGAA GTTT TTCGGG ATTTATTTTTGCCGA TERM 2471 1737295 - 1737282 - g 76 -3.7 -5.26875 | opp_overlap 1737294 GGGGCAAGTAAAAAA GCGGC GTTA GCCTC TGCCCTTGGCGAATA TERM 2472 1737433 - 1737444 + G 70 -5.8 -4.25566 | AAGACGATGCTTTAC TGCC TAAT GGCA TTTTAGATGATTATT NTHI1899 1737081 - 1738844 + | hypothetical protein TERM 2473 1738852 - 1738888 + F 83 -6.7 -4.99947 | opp_overlap 1738878 1738881, overlap 1738853 1738856 AAAAATAAATTAGGC TTATTTCGTACTTTCAA TTC TTGAAAGTACGACCTAC TTTTCTTTGCTTCGC TERM 2474 1738853 - 1738887 + F 86 -10.2 -3.58884 | opp_overlap 1738878 1738881, overlap 1738852 1738856 AAAATAAATTAGGCT TATTTCGTACTTTCAA TTC TTGAAAGTACGACCTA CTTTTCTTTGCTTCG TERM 2475 1738856 - 1738884 + F 84 -11.9 -2.5949 | opp_overlap 1738878 1738881, overlap 1738853 1738852 ATAAATTAGGCTTAT TTCGTACTTTCAA TTC TTGAAAGTACGAC CTACTTTTCTTTGCT TERM 2476 1738919 - 1738881 - f 79 -10.6 -2.9162 | gap 1, opp_overlap 1738856 1738853 1738852, overlap 1738878 CAATTCTTGAAAGTA CGACCTACTTTTCTTTG CTTCGC CAAAGAAAAGTAGG-CA AAAGAAAAGCGCCCC TERM 2477 1738942 - 1738923 - f 74 -6.5 -4.27686 | opp_overlap 1738922 1738919 1738923 GAAAAGTAGGCAAAA GAAAAGC GCCCCT GCTTTTC CTTATTTCCTTTGTT TERM 2478 1739290 - 1739309 + F 72 -5 -4.7329 | opp_overlap 1739290 1739289 1739281 1739282 AACAAAGGGAATAAG GAAAAGCA GGGT TGCCTTTC TTTTTGCCTACTTTT gyrA 1739444 - 1742086 + | DNA gyrase subunit A TERM 2479 1742132 - 1742099 - T 100 -11.1 -4.386 | opp_overlap 1742105, overlap 1742102 1742105 TAACTGGTTATAAAA GAAGAAGTGCGGTGA AATT TCACCGCACTTTTTT ATGACTAATTAATTA TERM 2480 1742129 - 1742102 - T 100 -12.8 -4.30995 | opp_overlap 1742105, overlap 1742099 1742105 CTGGTTATAAAAGAA GAAGTGCGGTGA AATT TCACCGCACTTT TTTATGACTAATTAA TERM 2481 1742105 - 1742126 + T 100 -14.5 -5.28778 | opp_overlap 1742102 1742099 1742105 GTTATAAAAGAAGAA GTGCGGTGA AATT TCACCGCAC TTTTTTATGACTAAT TERM 2482 1742126 - 1742105 - T 100 -14.5 -4.26938 | opp_overlap 1742105, overlap 1742102 1742099 GTTATAAAAGAAGAA GTGCGGTGA AATT TCACCGCAC TTTTTTATGACTAAT metX 1743217 - 1742141 - | homoserine O-acetyltransferase TERM 2483 1743308 - 1743285 - H 81 -8.2 -4.1552 | opp_overlap 1743286, overlap 1743286 TAGCTTGTCAAGAAA TTTTAGCCGT CTAA ACGGCTAAAT TATCGCACATCAATG TERM 2484 1743286 - 1743307 + H 87 -11.7 -3.30243 | opp_overlap 1743285 1743286 AGCTTGTCAAGAAAT TTTAGCCGT CTAA ACGGCTAAA TTATCGCACATCAAT TERM 2485 1743307 - 1743286 - H 84 -11.7 -3.08991 | opp_overlap 1743286, overlap 1743285 AGCTTGTCAAGAAAT TTTAGCCGT CTAA ACGGCTAAA TTATCGCACATCAAT TERM 2486 1743965 - 1743978 + G 72 -5.2 -4.76892 | AAGAGAAGTTTTTGC CCGC ATAAAA GCGG TTTTTGACTTGATAT sanA 1743321 - 1744055 + | SanA TERM 2487 1744326 - 1744298 - T 95 -8.9 -5.09173 | opp_overlap 1744301, overlap 1744271 1744301 TAATATTCCAAAAAA TAAGGGCTGATTT TAA ATATCAGCCCTTT GCTTTGATGGTACAT TERM 2488 1744301 - 1744323 + T 100 -10.6 -4.11623 | opp_overlap 1744298 1744301 TATTCCAAAAAATAA GGGCTGATTT TAA ATATCAGCCC TTTGCTTTGATGGTA TERM 2489 1744323 - 1744301 - T 100 -10.6 -4.63089 | opp_overlap 1744301, overlap 1744298 TATTCCAAAAAATAA GGGCTGATTT TAA ATATCAGCCC TTTGCTTTGATGGTA folC 1745656 - 1744343 - | folylpolyglutamate synthase TERM 2490 1745627 - 1745611 - G 100 -12.3 -4.56978 | opp_overlap 1745611, overlap 1745589 TTTCTAAATAAGAAA GCCACTC AGC GAGTGGC GAAGTGGCTTTAAGT accD 1746539 - 1745649 - | acetyl-CoA carboxylase subunit beta htoA 1746733 - 1748124 + | periplasmic serine protease do/HhoA-like precursor TERM 2491 1748147 - 1748173 + T 100 -10.2 -4.83169 | opp_overlap 1748150 1748152, overlap 1748150 GATATATTTAAGAAA AAAGTCCGATCA CAA TGATCGGGCTTC TTTTTATGCAGCAAT TERM 2492 1748170 - 1748150 - T 100 -9.7 -5.49234 | opp_overlap 1748147 1748150, overlap 1748152 ATATTTAAGAAAAAA GTCCGATCA CAA TGATCGGGC TTCTTTTTATGCAGC TERM 2493 1748150 - 1748170 + T 100 -11.9 -4.52873 | opp_overlap 1748150 1748152, overlap 1748147 ATATTTAAGAAAAAA GTCCGATCA CAA TGATCGGGC TTCTTTTTATGCAGC TERM 2494 1748168 - 1748152 - T 81 -10.9 -2.91664 | opp_overlap 1748150 1748147, overlap 1748150 ATTTAAGAAAAAAGT CCGATCA CAA TGATCGG GCTTCTTTTTATGCA mfd 1751617 - 1748177 - | transcription-repair coupling factor TERM 2495 1749509 - 1749528 + g 73 -3.6 -5.11254 | overlap 1749507 TATATCGACTTTTCC TTCTGCAA GGTT TTCCAGAA TTTGTTTTTGTTCTT TERM 2496 1750358 - 1750380 + g 79 -6.4 -4.72188 | GCTAAATTTTTCATT TTCAATCTGT TCT AAAGATTGAA TTTGTTTTGGCTTGA TERM 2497 1751657 - 1751630 - R 74 -6.4 -4.30253 | opp_overlap 1751630, overlap 1751627 CATAAATATAAATAA TGCGTCAATCTT GTGT AAAATTGAGGCA TAGTGTACTGGAATT NTHI1907 1751892 - 1751719 - | hypothetical protein NTHI1908 1753859 - 1751889 - | P-loop ATPase fused to an acetyltransferase TERM 2498 1753423 - 1753440 + g 71 -4.1 -4.98436 | overlap 1753429 GTCTCGATAATTTGT TGTTGCG CTAA CGTAGCA TTTTTGTGATGTTCG NTHI1910 1754205 - 1753864 - | hypothetical protein TERM 2499 1754260 - 1754222 - R 71 -3.3 -5.03715 | gap 1, opp_overlap 1754231, overlap 1754231 ATCACTCCCAAAAAA GTAAGAAAAGTGCGGT CAAAATCC ACCGCAC-TTTCTCAA TCTAAATTACTTCGC TERM 2500 1754231 - 1754252 + r 73 -7.3 -3.9534 | opp_overlap 1754222 1754231 AAAAAAGTAAGAAAA GTGCGGT CAAAATCC ACCGCAC TTTCTCAATCTAAAT TERM 2501 1754252 - 1754231 - R 88 -7.3 -4.95211 | opp_overlap 1754231, overlap 1754222 AAAAAAGTAAGAAAA GTGCGGT CAAAATCC ACCGCAC TTTCTCAATCTAAAT NTHI1911 1755937 - 1754267 - | putative ABC transporter ATP-binding protein TERM 2502 1755424 - 1755410 - G 72 -7.8 -3.71848 | overlap 1755418 TTTTTCGAGTAATAA GCGGCA AAG TGCCAC TCGGCGACGCTCACC TERM 2503 1755989 - 1755959 - R 100 -13.5 -5.60993 | TTCCTCACAAAAAAA TTCGCCCTATTCT ACTGG AAAATAGGGCGAA AATATAGGAAACAAG TERM 2504 1756045 - 1756001 - R 87 -10.1 -4.00589 | opp_overlap 1756004, overlap 1756004 1756023 CGAAAATATAGGAAA CAAGTGGACAGATTTTGCAAA AGT TTGGCGAAACCTAACCACTTG TCAATATTTAGAGTG NTHI1912 1756423 - 1756100 - | plasmid maintenance system antidote protein NTHI1913 1756739 - 1756434 - | plasmid maintenance system killer protein TERM 2505 1756796 - 1756786 - H 71 -5.4 -4.60292 | opp_overlap 1756793, overlap 1756793 CATAATAAGAATAAA TGCA CAA TGCA AGAGTGCATCTTTCG TERM 2506 1756844 - 1756828 - H 100 -13.7 -6.02914 | CTTAGATAAAAAAAA CCACCCG AAA CGGGTGG CAGGAAAGTAGTTTA TERM 2507 1757515 - 1757535 + G 70 -7.5 -3.55622 | opp_overlap 1757515 CTTACGCTTCAAAAA GTGCGGTAG ATT TTTCCGCAC TTTCGAAAAATTGCC TERM 2508 1757535 - 1757515 - g 77 -6.8 -4.58395 | opp_overlap 1757515 CTTACGCTTCAAAAA GTGCGGTA GATTT TTCCGCAC TTTCGAAAAATTGCC NTHI1914 1757064 - 1757684 + | ABC transporter periplasmic component TERM 2509 1758237 - 1758216 - g 100 -8.7 -5.21709 | opp_overlap 1758216 CTCTACACGAAAAAA GTGCGGTGA AAAA TAACCGCAC TTTTCAGCCAAACAC TERM 2510 1758216 - 1758237 + G 79 -8.7 -4.07568 | opp_overlap 1758216 CTCTACACGAAAAAA GTGCGGTGA AAAA TAACCGCAC TTTTCAGCCAAACAC NTHI1915 1757687 - 1758655 + | ABC transporter permease TERM 2511 1758687 - 1758669 - f 100 -13.2 -4.91473 | opp_overlap 1758664 GAAGTTAAAAATAAA GCCCATCA ACA TGATGGGC TAAAAATCTTTTGGT TERM 2512 1758969 - 1758991 + F 74 -9.2 -2.98368 | overlap 1758968 1758972 1758972 CTAATATTTATTTTT CTATCCACAG AGC CTGTGGATAA CTTTGTGGATTAACT TERM 2513 1758972 - 1758988 + F 81 -10.9 -2.7204 | overlap 1758969 1758968 1758972 ATATTTATTTTTCTA TCCACAG AGC CTGTGGA TAACTTTGTGGATTA TERM 2514 1760503 - 1760493 - g 76 -5.4 -4.99861 | TATGAATTAGAAAAA TCAG GCA CTGA AATCATCGATCAAGT uvrB 1759269 - 1761308 + | excinuclease ABC subunit B TERM 2515 1761306 - 1761340 + T 72 -5.1 -4.67048 | gap 1, opp_overlap 1761314, overlap 1761309 1761310 1761314 TTTGTTTTTGATAAC TAAA-AAAACGCCAGC TTAA GCTGGCGTTCCATTTA TTTATTTTCACCTGA TERM 2516 1761309 - 1761336 + T 70 -4 -4.8743 | opp_overlap 1761314, overlap 1761306 1761310 1761314 GTTTTTGATAACTAA AAAAACGCCAGC TTAA GCTGGCGTTCCA TTTATTTATTTTCAC TERM 2517 1761331 - 1761314 - T 100 -12.7 -5.68023 | opp_overlap 1761310 1761309 1761306 1761314 TGATAACTAAAAAAA CGCCAGC TTAA GCTGGCG TTCCATTTATTTATT TERM 2518 1761314 - 1761331 + T 93 -12.7 -3.44318 | opp_overlap 1761314, overlap 1761310 1761309 1761306 TGATAACTAAAAAAA CGCCAGC TTAA GCTGGCG TTCCATTTATTTATT NTHI1918 1763263 - 1761338 - | phosphoglycerol transferase-like protein TERM 2519 1761400 - 1761412 + g 75 -3.3 -5.28481 | TACCTAATAAAGCGT GAGCC AAT GCCTC TTTTTTCATTGCATC TERM 2520 1761607 - 1761597 - G 72 -5.4 -4.54727 | overlap 1761598 TGCGTTAAATCAAAA CCAA TCA TTGG ATAATTGCCACTTAC TERM 2521 1762132 - 1762116 - G 73 -2.9 -5.26316 | overlap 1762117 TTACCGTAGAAAAAA CTCGCCA TAT TGTCGAA GTGCTTTTCGCCACC TERM 2522 1763427 - 1763454 + r 83 -10.7 -3.05384 | opp_overlap 1763431, overlap 1763431 ACATTCACTAGAAAA TAAAGCCTCGA GAAAAA TCGAGGCTTTG TTAAGTAAACGACGG TERM 2523 1763450 - 1763431 - R 100 -9.3 -4.80453 | opp_overlap 1763427 1763431 TCACTAGAAAATAAA GCCTCGA GAAAAA TCGAGGC TTTGTTAAGTAAACG TERM 2524 1763431 - 1763450 + r 89 -9.3 -4.20516 | opp_overlap 1763431, overlap 1763427 TCACTAGAAAATAAA GCCTCGA GAAAAA TCGAGGC TTTGTTAAGTAAACG mao2 1765774 - 1763504 - | malic enzyme TERM 2525 1766254 - 1766237 - g 83 -4.1 -5.59879 | opp_overlap 1766237 TACAAACAGAAAAAA GTTATCC TGTG GGAAAAC TTGCTGATCTTGAAA NTHI1921 1765972 - 1766592 + | polysaccharide biosynthesis protein TERM 2526 1766601 - 1766615 + F 100 -11.4 -5.72053 | opp_overlap 1766601 AGCTTAATAGATAAA GGCTGC ATT GCAGCC TTTTTTGTTTCGTTC TERM 2527 1766615 - 1766601 - f 100 -11.4 -4.21142 | opp_overlap 1766601 AGCTTAATAGATAAA GGCTGC ATT GCAGCC TTTTTTGTTTCGTTC TERM 2528 1767343 - 1767331 - g 70 -6.9 -3.8062 | GAATCCTTAGAAGAA GGCGA ATA CCGCC CATTAACTCAAAGTG rsuA 1766683 - 1767381 + | ribosomal small subunit pseudouridine synthase A bcr 1767383 - 1768579 + | bicyclomycin/multidrug efflux system TERM 2529 1768591 - 1768569 - T 100 -13.4 -4.24002 | opp_overlap 1768566 GCCGAAATCTTAAAA GCCGTGGGTA AAT TCCCCACGGC GCAATGATTGTTTTC NTHI1924 1769411 - 1768611 - | hypothetical protein TERM 2530 1769444 - 1769432 - H 75 -4.9 -5.02074 | TGACGTCTGAAAAAA TAATG CGT CATTA TGCTAAAAATTCATT NTHI1925 1769509 - 1770171 + | hypothetical protein proA 1770192 - 1771445 + | gamma-glutamyl phosphate reductase TERM 2531 1771487 - 1771517 + T 95 -12 -4.05321 | opp_overlap 1771494, overlap 1771494 GAGATTATTTGCATA TAAAAAAGTCCGCG AAA TGCGGACTTTTTCA TTATCTTTATTTGTC TERM 2532 1771510 - 1771494 - T 100 -9.4 -5.36441 | opp_overlap 1771487 1771494 TTTGCATATAAAAAA GTCCGC GAAAT GCGGAC TTTTTCATTATCTTT TERM 2533 1771494 - 1771510 + T 100 -10.1 -5.00412 | opp_overlap 1771494, overlap 1771487 TTTGCATATAAAAAA GTCCGCG AAA TGCGGAC TTTTTCATTATCTTT dnaJ 1772669 - 1771524 - | chaperone protein DnaJ TERM 2534 1772736 - 1772701 - R 72 -4.9 -4.64861 | gap 2, opp_overlap 1772711, overlap 1772711 GTTGCTGAAAATAAA TACACCAAAAGGGCGTG TTTC CACGCCC-TTTG-TTTA TGCTAAGAAGAGCGG TERM 2535 1772711 - 1772728 + r 100 -12.7 -4.59342 | opp_overlap 1772711 1772701 ATAAATACACCAAAA GGGCGTG TTTC CACGCCC TTTGTTTATGCTAAG TERM 2536 1772728 - 1772711 - R 100 -12.7 -4.47397 | opp_overlap 1772711, overlap 1772701 ATAAATACACCAAAA GGGCGTG TTTC CACGCCC TTTGTTTATGCTAAG dnaK 1774663 - 1772756 - | chaperone protein DnaK TERM 2537 1772948 - 1772973 + g 71 -4.1 -4.87328 | gap 1 GCCTTTTGCTGCTGT TTCAAGCT-CAG CGA CTGCAGCTTCAA TTTTCTCTTTGTCTG TERM 2538 1773836 - 1773855 + g 70 -2.9 -5.07011 | GTTCACTTCAGTAGA TTGAGCT GATGAA AGTTCAA TTTTTGCTTTCTCTG NTHI1930 1774930 - 1776372 + | hypothetical protein TERM 2539 1776374 - 1776406 + T 100 -14.3 -3.54414 | opp_overlap 1776379, overlap 1776379 GATTTGGGAGATAAC TGAAACAGGGCGATA AAT TGTCGCCCTGTTTTG TATTTAATTAAAAGT TERM 2540 1776379 - 1776401 + T 100 -14.2 -4.84539 | opp_overlap 1776379, overlap 1776374 GGGAGATAACTGAAA CAGGGCGATA AAT TGTCGCCCTG TTTTGTATTTAATTA TERM 2541 1776401 - 1776379 - T 91 -12 -3.83323 | opp_overlap 1776379 1776374 GGGAGATAACTGAAA CAGGGCGATA AAT TGTCGCCCTG TTTTGTATTTAATTA TERM 2542 1776428 - 1776447 + T 100 -9.2 -5.35365 | overlap 1776429 ATTAAAAGTATCGTA GGGTGGGC TTCA GCCCACCG TTTTTATTCTATTTT TERM 2543 1776429 - 1776446 + T 95 -12.7 -3.77559 | overlap 1776428 TTAAAAGTATCGTAG GGTGGGC TTCA GCCCACC GTTTTTATTCTATTT mgsA 1776987 - 1776529 - | methylglyoxal synthase TERM 2544 1776870 - 1776885 + g 74 -6.1 -4.56791 | opp_overlap 1776869 TTGCATAAAGTATAT GAGGC TTAAGT GCCTC TTTGTGTTTTTGCGT TERM 2545 1777194 - 1777176 - H 71 -3.2 -5.0538 | opp_overlap 1777176 1777186, overlap 1777186 CTTTATCTCAAAAAA TCTTCTAA AAT TTACAAGA TTTGTTAAATGTTTG TERM 2546 1777380 - 1777404 + G 72 -7.9 -3.71848 | overlap 1777375 GAAGAGGGCGTTGAG CGTGCTCAATA TAT TGTTGAGCAAG TTATTGGTCAAGCAC aceE 1777287 - 1779947 + | pyruvate dehydrogenase subunit E1 TERM 2547 1779958 - 1779992 + F 95 -13 -3.53012 | opp_overlap 1779958 1779959, overlap 1779959 CGTAATTGATGAAAA CTGCGGTCAAAAAACA TTG TGTTTTATGACCGCAC TTTAAAAGGAACAAA TERM 2548 1779992 - 1779958 - f 100 -13 -4.30978 | opp_overlap 1779958 1779959, overlap 1779959 CGTAATTGATGAAAA CTGCGGTCAAAAAACA TTG TGTTTTATGACCGCAC TTTAAAAGGAACAAA TERM 2549 1779991 - 1779959 - f 100 -16.5 -3.18105 | opp_overlap 1779959 1779958, overlap 1779958 GTAATTGATGAAAAC TGCGGTCAAAAAACA TTG TGTTTTATGACCGCA CTTTAAAAGGAACAA TERM 2550 1779959 - 1779991 + F 100 -16.5 -2.71712 | opp_overlap 1779958 1779959, overlap 1779958 GTAATTGATGAAAAC TGCGGTCAAAAAACA TTG TGTTTTATGACCGCA CTTTAAAAGGAACAA TERM 2551 1781192 - 1781171 - g 100 -5.9 -5.69262 | gap 1, opp_overlap 1781171, overlap 1781173 GCAGAAAAACAAAAA CTCGGCGTAA AAA TCACGCC-AG TTGTGTTCATTATGA aceF 1780010 - 1781707 + | dihydrolipoamide acetyltransferase TERM 2552 1781712 - 1781734 + F 89 -12 -3.19449 | opp_overlap 1781708 TAGTAATGTAATCTG TAGGTGGGCT TTA AGCCCACCGA TTAATGAAATCTTTG TERM 2553 1782528 - 1782511 - g 79 -4.2 -5.27923 | CAAGTTGAGAAAAAA TTCAAG TTAATG CTTGAA ACCAAAGTGACTGCA lpdA 1781821 - 1783245 + | dihydrolipoamide dehydrogenase TERM 2554 1783262 - 1783243 - T 74 -2.2 -5.52096 | opp_overlap 1783246 1783254 1783257, overlap 1783246 1783257 1783260 AAAGCGAAGAAAAAA TAATTCTT ATTG AAGAATTT TTAATTCTGCTTAGA TERM 2555 1783246 - 1783259 + T 70 -3.9 -4.95876 | opp_overlap 1783243 1783246 1783257, overlap 1783254 1783257 GCGAAGAAAAAATAA TTCTT ATTG AAGAA TTTTTAATTCTGCTT TERM 2556 1783297 - 1783322 + T 100 -13.5 -4.47397 | opp_overlap 1783297 1783303, overlap 1783303 AAATTCCAGCCTAAA TAAAAATCCCC AATT GGGGATTTTTA TTTTCCTCTCTTTCT TERM 2557 1783322 - 1783297 - T 100 -13.5 -3.61371 | opp_overlap 1783297 1783303, overlap 1783303 AAATTCCAGCCTAAA TAAAAATCCCC AATT GGGGATTTTTA TTTTCCTCTCTTTCT TERM 2558 1783316 - 1783303 - T 90 -8.1 -5.28942 | opp_overlap 1783297 1783303, overlap 1783297 CAGCCTAAATAAAAA TCCCC AATT GGGGA TTTTTATTTTCCTCT TERM 2559 1783303 - 1783316 + T 93 -8.1 -5.52079 | opp_overlap 1783303 1783297, overlap 1783297 CAGCCTAAATAAAAA TCCCC AATT GGGGA TTTTTATTTTCCTCT NTHI1936 1783399 - 1783292 - | hypothetical protein apt 1783405 - 1783947 + | adenine phosphoribosyltransferase TERM 2560 1784106 - 1784067 - g 81 -11.5 -2.71139 | opp_overlap 1784075, overlap 1784063 1784072 TTAAAAGATAATCGA CTACATCACGCTTACCT CTTTTC AGGCACGCGTGGTGTAG GAAAAACCTCTATTG dnaX 1783959 - 1786025 + | DNA polymerase III subunits gamma and tau upp 1786165 - 1786791 + | uracil phosphoribosyltransferase TERM 2561 1786821 - 1786804 - f 81 -8.4 -4.19577 | opp_overlap 1786804, overlap 1786792 1786816 TAATCCCCAAAACAA GACGGC ATTTAA GCCGTC TTTTTTCCGTGCGTG TERM 2562 1786804 - 1786821 + F 90 -8.4 -5.09895 | opp_overlap 1786804 1786792 1786816 TAATCCCCAAAACAA GACGGC ATTTAA GCCGTC TTTTTTCCGTGCGTG uraA 1786895 - 1788139 + | uracil permease TERM 2563 1788153 - 1788174 + F 83 -8.1 -4.35339 | opp_overlap 1788153 AATCCTCATTTCAAA GGGTTAAAT TATC ATTTAGCCC TTTCTTACTTAATCT NTHI1942 1788205 - 1788900 + | DNA replication initiation factor TERM 2564 1788908 - 1788921 + T 86 -8.1 -4.77036 | opp_overlap 1788898 1788908 ATCTATAACAAAAAA GGCAC TAAT GTGCC TTTTTAATCATCCAC TERM 2565 1788921 - 1788908 - T 93 -8.1 -5.56673 | opp_overlap 1788908, overlap 1788898 ATCTATAACAAAAAA GGCAC TAAT GTGCC TTTTTAATCATCCAC NTHI1943 1789248 - 1788967 - | translation initiation factor 1-like proterin pyrF 1789947 - 1789255 - | orotidine 5'-phosphate decarboxylase TERM 2566 1789292 - 1789280 - G 76 -9.1 -3.75053 | GATACATTAATAGAA CGGAG AAC CTCCG CAGGATTATCCGCTT TERM 2567 1789800 - 1789782 - G 89 -6 -5.52909 | opp_overlap 1789782 TAAGATCCAAAAAAA CATCAAAG TTA CGTTGATG TAATTGTTTTACAAA NTHI1945 1791161 - 1789971 - | hypothetical protein NTHI1946 1791454 - 1791161 - | hypothetical protein ihfB 1791813 - 1791529 - | integration host factor beta-subunit TERM 2568 1791897 - 1791922 + r 85 -11.9 -3.10677 | opp_overlap 1791897 1791900, overlap 1791900 ATAACTCCTAACAAA TAAGGCTGGAC ATCA GCCCAGCCTTA TTACGTGAATTAATT TERM 2569 1791922 - 1791897 - R 100 -14.1 -4.18702 | opp_overlap 1791897 1791900, overlap 1791900 ATAACTCCTAACAAA TAAGGCTGGAC ATCA GCCCAGCCTTA TTACGTGAATTAATT TERM 2570 1791919 - 1791900 - R 100 -11.4 -4.20768 | opp_overlap 1791897 1791900, overlap 1791897 ACTCCTAACAAATAA GGCTGGAC ATCA GCCCAGCC TTATTACGTGAATTA TERM 2571 1791900 - 1791919 + r 80 -9.2 -3.69283 | opp_overlap 1791900 1791897, overlap 1791897 ACTCCTAACAAATAA GGCTGGAC ATCA GCCCAGCC TTATTACGTGAATTA rpsA 1793585 - 1791936 - | 30S ribosomal protein S1 TERM 2572 1792336 - 1792352 + g 75 -2.2 -5.47159 | opp_overlap 1792322 1792336, overlap 1792338 ACAGCTAATACAACA GCTGAC ACTTC GTCACC TTTTTTGTATTGACG cmk 1794482 - 1793688 - | cytidylate kinase TERM 2573 1794619 - 1794633 + H 76 -2.8 -5.55695 | opp_overlap 1794608, overlap 1794621 AGGACGAAATTCTTT CAGCTA AAG TAGCTC TTTTTTCTATTATTA TERM 2574 1794943 - 1794930 - g 70 -8.1 -3.32844 | opp_overlap 1794922 1794919 1794919 GCTCGCATTGCAGAA GCTGC TGGT GCAGC TGCAGTGATGGCTTT NTHI1950 1794828 - 1795703 + | pyridoxine biosynthesis protein NTHI1951 1795704 - 1796282 + | glutamine amidotransferase subunit PdxT dld 1798525 - 1796831 - | D-lactate dehydrogenase NTHI1953 1798785 - 1798895 + | hypothetical protein TERM 2575 1799287 - 1799277 - T 87 -6.8 -5.48303 | opp_overlap 1799276 ATAACTGGAAAAAAA GCTC CAT GAGC GTATTCAGAAGAGGC TERM 2576 1799337 - 1799307 - T 100 -14.9 -3.68261 | opp_overlap 1799309, overlap 1799331 TCAGAAGAGGCTAAA GACTGAGTCCTGT AAATG ACAGAACTCAGTC CTTGAGCTAAATAAG TERM 2577 1799309 - 1799335 + T 72 -9.5 -2.73681 | opp_overlap 1799307 1799331 AGAAGAGGCTAAAGA CTGAGTCCTGT AAATG ACAGAACTCAG TCCTTGAGCTAAATA TERM 2578 1799429 - 1799389 - T 77 -9.2 -3.14998 | opp_overlap 1799396 1799401, overlap 1799401 CATTTATCAATAAAC TGATCAAAAAAACCGAAC TTAAT GTTCGGTTTTCTTCTTCA TTACATAATACGACG TERM 2579 1799396 - 1799422 + T 75 -8.1 -3.82604 | opp_overlap 1799389 1799401, overlap 1799401 CAATAAACTGATCAA AAAAACCGAAC TTAAT GTTCGGTTTTC TTCTTCATTACATAA TERM 2580 1799401 - 1799417 + T 90 -8 -4.95167 | opp_overlap 1799389 1799401, overlap 1799396 AACTGATCAAAAAAA CCGAAC TTAAT GTTCGG TTTTCTTCTTCATTA TERM 2581 1799417 - 1799401 - T 93 -8 -5.54894 | opp_overlap 1799401 1799396, overlap 1799389 AACTGATCAAAAAAA CCGAAC TTAAT GTTCGG TTTTCTTCTTCATTA nlpC 1799981 - 1799430 - | lipoprotein NlpC tldD 1801542 - 1800094 - | hypothetical protein NTHI1956 1802495 - 1801644 - | methyltransferase NTHI1957 1802567 - 1804294 + | putative lipoprotein TERM 2582 1804346 - 1804319 - g 71 -9.2 -2.52681 | gap 1, opp_overlap 1804320, overlap 1804318 TAAAACGTCAGCAAG GGGCGAGCTTTGA GCA TCA-AGCTCGCCT TTTTTTAGAATCAAA TERM 2583 1804320 - 1804345 + G 100 -12.7 -5.44119 | gap 1, opp_overlap 1804319 1804318 AAAACGTCAGCAAGG GGCGAGCTTTGA GCA TCA-AGCTCGCC TTTTTTTAGAATCAA NTHI1958 1804294 - 1804653 + | hypothetical protein NTHI1959 1804666 - 1805250 + | hypothetical protein NTHI1960 1805307 - 1805888 + | hypothetical protein TERM 2584 1805931 - 1805898 - f 90 -11.3 -3.58037 | gap 1, opp_overlap 1805898 GACTAATCCTTCAAA GTGCGGTGAAAAATTC AAC AAATTTTT-ACCGCAC TTTTTCTTATTTTTC TERM 2585 1805898 - 1805931 + F 100 -11.9 -5.51353 | opp_overlap 1805898 GACTAATCCTTCAAA GTGCGGTGAAAAATT CAAC AAATTTTTACCGCAC TTTTTCTTATTTTTC TERM 2586 1806629 - 1806619 - g 75 -6.8 -4.48072 | ATATTTAGTACAAAA CCGT GTG ACGG GAGAAATCTACGAGT nrdA 1806143 - 1808413 + | ribonucleotide-diphosphate reductase subunit alpha nrdB 1808555 - 1809685 + | ribonucleotide-diphosphate reductase subunit beta TERM 2587 1809751 - 1809704 - T 93 -8.1 -5.53079 | gap 1, opp_overlap 1809704 1809705 1809708, overlap 1809705 AAAACACATAAAAAA CTAACCGCACTTTGGAATATTC TTTTT AAATATTT-AAAGTGCGGTTAA TTTTTTATTCATTTT TERM 2588 1809704 - 1809751 + T 93 -7.4 -5.61689 | gap 1, opp_overlap 1809704 1809705, overlap 1809705 1809708 AAAACACATAAAAAA CTAACCGCACTTTGGAATATT CTTTTTA AATATTT-AAAGTGCGGTTAA TTTTTTATTCATTTT TERM 2589 1809705 - 1809750 + T 93 -10.9 -3.93353 | gap 1, opp_overlap 1809704 1809705, overlap 1809704 1809708 AAACACATAAAAAAC TAACCGCACTTTGGAATATT CTTTTTA AATATTT-AAAGTGCGGTTA ATTTTTTATTCATTT TERM 2590 1809750 - 1809705 - T 81 -9.4 -3.88187 | gap 1, opp_overlap 1809705 1809704 1809708, overlap 1809704 AAACACATAAAAAAC TAACCGCACTTTGGAATATTC TTTTT AAATATTT-AAAGTGCGGTTA ATTTTTTATTCATTT TERM 2591 1809708 - 1809747 + T 79 -8.2 -4.04157 | gap 1, opp_overlap 1809705 1809704, overlap 1809705 1809704 CACATAAAAAACTAA CCGCACTTTGGAATATT CTTTTTA AATATTT-AAAGTGCGG TTAATTTTTTATTCA TERM 2592 1809766 - 1809796 + T 100 -14.3 -4.30933 | opp_overlap 1809771, overlap 1809771 ATTTTTTATTCATTT TAAAAGGCTTTCT AACAC AGAAAGCCTTTTA TTTCTTAGATTTCTA TERM 2593 1809791 - 1809771 - T 100 -10.5 -4.14739 | opp_overlap 1809766 1809771 TTATTCATTTTAAAA GGCTTTCTA ACA CAGAAAGCC TTTTATTTCTTAGAT TERM 2594 1809771 - 1809791 + T 100 -9.8 -5.10665 | opp_overlap 1809771, overlap 1809766 TTATTCATTTTAAAA GGCTTTCT AACAC AGAAAGCC TTTTATTTCTTAGAT sucB 1811030 - 1809801 - | dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex TERM 2595 1810409 - 1810428 + g 71 -4.4 -4.74504 | gap 1, opp_overlap 1810409 1810411 CCACTTCATTGAAAG TAGTA-AGC ATT GCTGTACTA TTTTTGGCTTCAAGT kgd 1813985 - 1811133 - | alpha-ketoglutarate decarboxylase TERM 2596 1814120 - 1814092 - R 100 -11.1 -5.72254 | opp_overlap 1814092 1814089 TCAAACAATAAAAAA CCGCACTTCATCT CTT AAACAAAGTGCGG TTATTTTTACTTGTA NTHI1965 1814781 - 1814143 - | Zn-dependent hydrolase NTHI1966 1815546 - 1814791 - | putative deoxyribonuclease TERM 2597 1815561 - 1815584 + r 71 -5.2 -4.46617 | opp_overlap 1815549 1815565, overlap 1815565 TATCTTTTCCAATGA AAAACCGCAC AAAA GTGCGGTTAA TTTTACATTTGTTTT TERM 2598 1815565 - 1815580 + r 87 -10.4 -3.73399 | opp_overlap 1815565, overlap 1815561 TTTTCCAATGAAAAA CCGCAC AAAA GTGCGG TTAATTTTACATTTG TERM 2599 1815580 - 1815565 - R 100 -10.4 -4.8622 | opp_overlap 1815565 1815561 TTTTCCAATGAAAAA CCGCAC AAAA GTGCGG TTAATTTTACATTTG NTHI1967 1816158 - 1815598 - | hypothetical protein NTHI1968 1817643 - 1816174 - | hypothetical protein prc 1819804 - 1817717 - | carboxy-terminal protease TERM 2600 1819312 - 1819324 + g 79 -6.9 -4.60041 | CATCAGCTTCAGTTT GTGGC GCA GCCGC TTTTTCACGATCAAT TERM 2601 1819588 - 1819576 - G 72 -4.9 -4.8269 | TATAACGATCAAAAA TTTTC TCG GAAAA ATCATCATCTAATTT proQ 1820464 - 1819826 - | putative solute/DNA competence effector NTHI1972 1820649 - 1821899 + | paraquat-inducible protein A-like protein TERM 2602 1824440 - 1824397 - g 79 -9 -4.10161 | overlap 1824439 CAGCAGTTGCTAAAA GGTGGGATTTCTTTCTCCAC ACCA GCAGAAAAAGAAATTCAACC GCAAGCGCAGCCCAA NTHI1973 1821883 - 1824528 + | paraquat-inducible protein B-like protein moaE 1825035 - 1824583 - | molybdopterin converting factor subunit 2 moaD 1825281 - 1825036 - | molybdopterin synthase small subunit TERM 2603 1825077 - 1825063 - G 77 -6.4 -4.57073 | opp_overlap 1825063 TACTGGTGGGAAAAA GGCAAT TTC ATCGCC ATTTTTTACCGCACT TERM 2604 1825277 - 1825267 - G 70 -2.6 -5.14965 | AGTTTGAGCAAAAAA TAAA ATA TTTA ACATCTTATTTTTCC moaC 1825765 - 1825283 - | molybdenum cofactor biosynthesis protein C moaA 1826870 - 1825857 - | molybdenum cofactor biosynthesis protein A TERM 2605 1827737 - 1827723 - g 73 -7.2 -4.09321 | opp_overlap 1827735, overlap 1827730 CATTTAATGAAAGAA GAACAA ATT TTGTTC CCAATGATCAAAATG NTHI1979 1827315 - 1827788 + | regulator of cell morphogenesis and NO signaling NTHI1980 1827788 - 1827985 + | regulator of cell morphogenesis and NO signaling TERM 2606 1828050 - 1828005 - f 100 -12.9 -5.17353 | opp_overlap 1828005 1828008 ATATTCATCAAAAAA TAACCGCACTTTAATCTATTC CGAA AAACAAACTAAAGTGCGGTCA TTTCTATAAAAATTT NTHI1981 1828522 - 1829535 + | arabinose-5-phosphate isomerase TERM 2607 1829830 - 1829801 - g 73 -4.4 -4.88293 | overlap 1829827 AACTTGAAAAAGAAA CCGCTTGTTT TGATCTTATG AAACAAGCAG GCGTCACTGCCGATC yrbI 1829545 - 1830087 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase TERM 2608 1831644 - 1831629 - g 71 -4 -4.96388 | AATTAGCAAAGAAAA CCTCTT TAGA AAAAGG CTCAACAATTAATGT TERM 2609 1831867 - 1831847 - g 78 -11.3 -2.58544 | overlap 1831846 TTGGATCCGGATAAT GTTACCATT AGC AATGGTAAC GATGATCAATCTCAA TERM 2610 1832019 - 1832009 - g 71 -4 -4.85782 | TCTGCTAAAAAGAAA GTAA ATG TTAC TGCAGATATTAATGT hmw1A 1830518 - 1834996 + | HMW1A, high molecular weight adhesin 1 TERM 2611 1835062 - 1835094 + F 72 -9.2 -2.58579 | overlap 1835061 CGTATTATTTACTGT GTGGGTTAAAGTTC AGTAC GGGCTTTCACCCAC CTTGTAAAAAATTAC TERM 2612 1835383 - 1835355 - g 91 -9.6 -4.86939 | opp_overlap 1835362, overlap 1835357 TAACAAACCTAAAAA CAGCACAGCTTG AATTA CAGGCTGTGCTA GATAAAATTGAGCCA TERM 2613 1835381 - 1835357 - g 83 -10 -4.03043 | opp_overlap 1835362, overlap 1835355 ACAAACCTAAAAACA GCACAGCTTG AATTA CAGGCTGTGC TAGATAAAATTGAGC hmw1B 1835147 - 1836784 + | HMW1B, OMP-85-like protein required for secretion of HMW1A and HMW2A TERM 2614 1836824 - 1836802 - f 100 -14.2 -3.43217 | opp_overlap 1836802, overlap 1836793 CTGAAATTTAATCAA CTGGTAAGCG TTC CGCCTACCAG TTTTATAACTATATG TERM 2615 1836802 - 1836824 + F 100 -12 -4.46155 | opp_overlap 1836802 1836793 CTGAAATTTAATCAA CTGGTAAGCG TTC CGCCTACCAG TTTTATAACTATATG hmw1C 1836978 - 1838930 + | HMW1C, putative glycosyltransferase involved in glycosylation of HMW1A and HMW2A TERM 2616 1838949 - 1838998 + T 81 -5.9 -4.84918 | gap 1, opp_overlap 1838949 TTTTTTAAAGTAAAA GTGCGGTTAATTTTCAACGAGTTT TAA AATCTC-TCAAAAATCAACCGCAC TTTTATATTTATAAC TERM 2617 1838998 - 1838949 - T 100 -12.5 -4.54727 | gap 1, opp_overlap 1838949 TTTTTTAAAGTAAAA GTGCGGTTAATTTTCAACGAGTTT TAA AATCTC-TCAAAAATCAACCGCAC TTTTATATTTATAAC NTHI1986 1841163 - 1839007 - | hypothetical protein TERM 2618 1839795 - 1839760 - G 71 -3.4 -5.11063 | gap 1, overlap 1839763 1839767 1839770 ACTACGGAAGAAAAA GAACAAAGTACTTGTGA GCA CCACAAG-ACCCTGTTT TAATTCTAAGGTTGG TERM 2619 1839792 - 1839763 - G 70 -5.1 -4.64495 | gap 1, overlap 1839760 1839767 1839770 ACGGAAGAAAAAGAA CAAAGTACTTGTGA GCA CCACAAG-ACCCTG TTTTAATTCTAAGGT TERM 2620 1839788 - 1839767 - G 71 -4.5 -4.8245 | gap 1, overlap 1839763 1839760 1839770 AAGAAAAAGAACAAA GTACTTGTGA GCA CCACAAG-AC CCTGTTTTAATTCTA TERM 2621 1840530 - 1840518 - G 91 -9.1 -5.09173 | opp_overlap 1840516 TAATACGGTAAAAAA GTGCG GTA CGCAC AATATTAAATGCCGT TERM 2622 1841124 - 1841083 - G 81 -5.3 -5.34055 | gap 1, overlap 1841084 1841086 1841088 AGAAATATCAAAAAA CCATATTCCCACTGCCGCAA TAT TTACGGCAATAAAAACA-GG AATTGTAGAAATTAC TERM 2623 1841211 - 1841184 - R 70 -7.1 -3.7331 | opp_overlap 1841189, overlap 1841189 ATCCTTATCAAAATA GAAAAGTGAGC AACAAG GCTCACTTTTT ATTGTATAAAGTGCG TERM 2624 1841189 - 1841206 + r 89 -7 -5.24796 | opp_overlap 1841184 1841189 TATCAAAATAGAAAA GTGAGC AACAAG GCTCAC TTTTTATTGTATAAA TERM 2625 1841206 - 1841189 - R 88 -7 -4.91977 | opp_overlap 1841189, overlap 1841184 TATCAAAATAGAAAA GTGAGC AACAAG GCTCAC TTTTTATTGTATAAA NTHI1987 1841896 - 1841231 - | hypothetical protein TERM 2626 1841307 - 1841321 + g 71 -6.4 -4.11216 | overlap 1841308 AACCAATATTGAAGT TGTTGC TCT GCAACG TTTTCGCCCTGAACA TERM 2627 1841439 - 1841422 - G 74 -7.7 -4.03204 | opp_overlap 1841423 1841426, overlap 1841426 CAGTAAATTTAGAAA CTGATGC CGCT GCACCAG ACGCATTATATTCAG TERM 2628 1843049 - 1843027 - g 75 -2.1 -5.43974 | gap 1, opp_overlap 1843029, overlap 1843029 AAAATGAAAGAAAAA CAGGTACTTA ATGT TAAATACC-G TTTAAAAAAATCCCT TERM 2629 1843048 - 1843029 - g 70 -5.8 -4.30791 | opp_overlap 1843029, overlap 1843027 AATGAAAGAAAAACA GGTACTTA ATGT TAAATACC GTTTAAAAAAATCCC sohB 1842094 - 1843155 + | putative periplasmic protease TERM 2630 1843323 - 1843294 - f 89 -13.7 -2.87581 | opp_overlap 1843294, overlap 1843291 1843289 1843312 TTAATCCAAATATTA CGCAGCTAATCGT TTAA ATGATTAGCTGCG TTTTTTATTTCAATA TERM 2631 1843294 - 1843323 + F 100 -15.9 -5.65927 | opp_overlap 1843294 1843291 1843289 1843312 TTAATCCAAATATTA CGCAGCTAATCGT TTAA ATGATTAGCTGCG TTTTTTATTTCAATA TERM 2632 1843449 - 1843437 - f 80 -2.7 -5.61824 | CAAAAGGCAAAAAAA TAATG ACG CACTA TATTTTATTGATTAT rnfA 1843439 - 1844017 + | Na(+)-translocating NADH-quinone reductase subunit E rnfB 1844105 - 1844686 + | electron transport complex protein RnfB TERM 2633 1846131 - 1846115 - g 83 -10.9 -3.69332 | overlap 1846106 1846127 GAACAAGAGCGTAAA GCACGTT CAC AACGTGC AGCACAGGCTCGCCG TERM 2634 1846407 - 1846391 - g 89 -7.9 -5.05782 | ACCGATGCGAAAAAA GCAGCAG TAG CCGCCGC CATTGCTCGAGCAAA TERM 2635 1846572 - 1846559 - g 80 -5.9 -5.0538 | CTTGACCCTAAAAAA GCAGC CGTA GCCGC CGCCATTGCGCGCGC TERM 2636 1846614 - 1846601 - g 88 -3.1 -5.79588 | overlap 1846592 1846602 GCAAAAGCAAAAAAA CTTGC GCAA GCAAA TAGCACCAGCGAAGC rnfC 1844687 - 1846684 + | electron transport complex protein RnfC TERM 2637 1846739 - 1846726 - f 83 -5.9 -5.0538 | CTTGACCCTAAAAAA GCAGC CGTA GCCGC CGCCATTGCTCGGGC TERM 2638 1847793 - 1847804 + G 77 -5.8 -4.69053 | overlap 1847789 ATTATCCAGACGGCG TGGC ATTC GCCA TTTTATTAAGTAATA rnfD 1846814 - 1847890 + | electron transport complex protein RnfD TERM 2639 1848124 - 1848105 - g 73 -3.6 -5.0916 | opp_overlap 1848105 TCCTCAAGATAAAAA TTTTGTGG GTAT CCAAAAAA TTTATTTTGCGAAAA rnfG 1847890 - 1848513 + | electron transport complex protein RnfG TERM 2640 1848960 - 1848979 + G 71 -6.4 -4.19704 | overlap 1848961 CAAAAAACAGCTTAC TCCATTCC ATCT GGGATGGG TTTTCAATGGGATTA NTHI1995 1848515 - 1849222 + | SoxR-reducing system protein RsxE nth 1849344 - 1849979 + | endonuclease III NTHI1997 1850038 - 1851411 + | SNF family Na+-dependent transporter modC 1852490 - 1851435 - | molybdate transporter ATP-binding protein TERM 2641 1852442 - 1852454 + g 70 -7.7 -3.55815 | GCACTTGTATATTCG CTTGC AAG GCAAG TTTCCCGAGCTGTTT modB 1853166 - 1852477 - | molybdate ABC transporter permease protein TERM 2642 1853316 - 1853299 - R 100 -9.1 -4.95547 | opp_overlap 1853299 TCTATAATAACAAAA GGGCAGA AATA TCCGCCC TTCATGACTATTAAG modA 1854104 - 1853340 - | molybdate-binding periplasmic protein TERM 2643 1854885 - 1854910 + G 78 -7.1 -4.3739 | gap 1, opp_overlap 1854875 AAGAGGAAGCCATCC TTCAAT-TTGCT GAA AGCAACATTGAA TTTTGTGCCACGGTC modE 1854242 - 1855009 + | transcriptional regulator ModE lsgF 1855922 - 1855119 - | putative UDP-galactose--lipooligosaccharide galactosyltransferase TERM 2644 1855911 - 1855921 + g 73 -4 -5.07652 | TAAGGACATTAGGAC TGAA AAT TTCA TTTTATTTTCCCAAC lsgE 1856808 - 1855924 - | putative UDP-galactose--lipooligosaccharide galactosyltransferase TERM 2645 1856308 - 1856322 + g 83 -10 -3.90316 | overlap 1856305 CAAAGAACGAAGTGC GGTGGA TAA TCCACC TATTTTTAAAAACAT lsgD 1857593 - 1856820 - | putative UDP-GlcNAc--lipooligosaccharide N-acetylglucosaminyl glycosyltransferase lsgC 1858666 - 1857605 - | putative UDP-galactose--lipooligosaccharide galactosyltransferase lsgB 1859582 - 1858668 - | CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase TERM 2646 1858930 - 1858952 + g 90 -2.1 -5.84381 | opp_overlap 1858930 TGAGGGAAATAATAA TCAAAAGAA AATTG TTCTTTTAA TTTTTTTATTAATGA lsgA 1860784 - 1859579 - | putative lipooligosaccharide flippase TERM 2647 1860844 - 1860833 - H 71 -3 -5.14563 | opp_overlap 1860833 TCGTTTATCAAAAAA TAAG GGGG CTTA TTTTAACAAAATCAA NTHI2008 1860919 - 1861662 + | hypothetical protein TERM 2648 1861819 - 1861839 + T 77 -9.7 -3.04812 | opp_overlap 1861819, overlap 1861818 TATCTATAAGAAAAA CCGAATCCC ATA GAGATTCGG CTTTAATTATGTTGT TERM 2649 1861839 - 1861819 - T 100 -11.9 -5.20333 | opp_overlap 1861819 1861818 TATCTATAAGAAAAA CCGAATCCC ATA GAGATTCGG CTTTAATTATGTTGT NTHI2011 1865424 - 1864348 - | permease NTHI2012 1866524 - 1865421 - | permease TERM 2650 1867604 - 1867619 + G 70 -7.6 -3.64487 | CCAGATGGCAATGCT TATCGC CCAG GCGATA TTCTTACCACTATGA pepA 1866632 - 1868107 + | leucyl aminopeptidase NTHI2014 1870152 - 1868143 - | choline-glycine betaine transporter TERM 2651 1870419 - 1870389 - R 82 -5.5 -5.38497 | AGCTAAACTAAAAAA TGCGGTAAAATTT ACAAA ATAATTTACCGCA CAAATATCATTTATT qseC 1871802 - 1870447 - | sensor protein QseC TERM 2652 1871549 - 1871538 - G 79 -4.4 -5.252 | CAGTTTTAGAAAAAA TAGC AAAG GCTA AGGCATCATCGTCAT qseB 1872464 - 1871799 - | transcriptional regulatory protein TERM 2653 1872343 - 1872320 - G 70 -8.8 -3.20617 | overlap 1872318 AGGTTAAATCCAATA CCACCGCATC ATAA GATGCAGAGG TTAAAGCAGCCATTC TERM 2654 1872514 - 1872495 - R 100 -10 -5.03994 | opp_overlap 1872495 1872497 1872513 CTTTATAGACAAAAA TAGCGAGC TAAC GCCCGCTA TCTTCAAAGATAATT NTHI2017 1872893 - 1872528 - | hypothetical protein TERM 2655 1872980 - 1872962 - R 75 -4.7 -4.88786 | ATTAAAACAAATAAA TCTTAAT AAAAG ATTAAGA GGACTATACTTTTTT TERM 2656 1873165 - 1873175 + r 71 -6.8 -4.23054 | overlap 1873164 ACTAATAAAATACTC GCAC TTT GTGC TTTTAAATGATGTGT TERM 2657 1874052 - 1874081 + r 79 -9.3 -3.47941 | opp_overlap 1874050, overlap 1874053 1874055 1874075 TCTATTTTAACTAGC GTAACCGTGGGTA AGTA TACCCACGGCTAG TTATAGTCGTTCCTC TERM 2658 1874053 - 1874080 + r 86 -12.8 -2.68282 | opp_overlap 1874050, overlap 1874052 1874055 1874075 CTATTTTAACTAGCG TAACCGTGGGTA AGTA TACCCACGGCTA GTTATAGTCGTTCCT TERM 2659 1874055 - 1874078 + r 81 -11 -2.87957 | opp_overlap 1874050, overlap 1874053 1874052 1874075 ATTTTAACTAGCGTA ACCGTGGGTA AGTA TACCCACGGC TAGTTATAGTCGTTC TERM 2660 1874166 - 1874138 - R 78 -7.6 -4.11216 | gap 1, opp_overlap 1874139, overlap 1874141 GGGGTAGCCTTAAAA TTAGCCTAGGATA TACC TACCCTAGGC-AA TTTGTCTTCCCCTAG TERM 2661 1874139 - 1874166 + r 75 -7 -4.20368 | opp_overlap 1874138 1874141 GGGTAGCCTTAAAAT TAGCCTAGGATA TACC TACCCTAGGCAA TTTGTCTTCCCCTAG TERM 2662 1874164 - 1874141 - R 85 -11.8 -3.09004 | opp_overlap 1874139, overlap 1874138 GTAGCCTTAAAATTA GCCTAGGATA TACC TACCCTAGGC AATTTGTCTTCCCCT TERM 2663 1874216 - 1874195 - R 71 -8.7 -3.08642 | opp_overlap 1874195 1874192 1874191 AGATTATTTATTTAA CCGCAGGTA AGTA TACCCACGG TTAGTTATAGTAGCT TERM 2664 1874276 - 1874245 - R 88 -13.2 -3.14132 | gap 1, opp_overlap 1874252 CTCCTCTTTGAGGAA TCTCA-CACTACCCC AAC GGGGTAGTATTGAGA TTAACCTAGGGTATA TERM 2665 1874252 - 1874268 + r 87 -12.3 -3.09671 | opp_overlap 1874245 TTGAGGAATCTCACA CTACCCC AAC GGGGTAG TATTGAGATTAACCT TERM 2666 1874278 - 1874305 + r 75 -7 -4.20368 | opp_overlap 1874281 GGGTAGTATTGAGAT TAACCTAGGGTA TACC TACCCTAGGCAA TTTGTCTTCCCCTAG TERM 2667 1874302 - 1874281 - R 91 -13.1 -3.28416 | opp_overlap 1874278 TAGTATTGAGATTAA CCTAGGGTA TACC TACCCTAGG CAATTTGTCTTCCCC TERM 2668 1874360 - 1874377 + r 91 -2.6 -5.9873 | opp_overlap 1874350 1874361, overlap 1874361 TATAATAAATAAAAA ATCCGC ACAAAG GCGGAC TTTTTTTTATCGTAA TERM 2669 1874376 - 1874361 - R 93 -6.1 -5.82036 | opp_overlap 1874361 1874360, overlap 1874350 ATAATAAATAAAAAA TCCGC ACAAAG GCGGA CTTTTTTTTATCGTA crr 1874898 - 1874398 - | glucose-specific PTS system component TERM 2670 1874711 - 1874678 - G 70 -4.7 -4.66609 | overlap 1874709 GATTCCATTGAAAAA GCGTGATTGGT TTCAAAAATTTT ACCAATCACAC CATCCACTGGCGCAA TERM 2671 1874831 - 1874814 - G 78 -9.9 -3.36749 | CATCTTCAATATTAA CGATCTC GCCA GAGATCG GTGCATAAATTTCAA ptsI 1876685 - 1874958 - | phosphoenolpyruvate-protein phosphotransferase TERM 2672 1875874 - 1875854 - G 78 -9.7 -3.30474 | overlap 1875847 CGTCACAATCACGAA TCGTCCCGA TAT TCGCGACGA TATCAACCTTATGTC TERM 2673 1876758 - 1876724 - R 80 -6.7 -4.74653 | gap 1, overlap 1876727 AAAGTAATAAATAAA CAATAGCCATAAAATT TCAC AATTTTATGGCTAA-G TAAGAATTATTCTAA TERM 2674 1876756 - 1876727 - R 100 -13.9 -4.43668 | overlap 1876724 GTAATAAATAAACAA TAGCCATAAAATT TCAC AATTTTATGGCTA AGTAAGAATTATTCT ptsH 1877022 - 1876765 - | phosphocarrier protein HPr engC 1878221 - 1877181 - | ribosome-associated GTPase orn 1878292 - 1878840 + | oligoribonuclease TERM 2675 1878976 - 1878960 - T 72 -9.5 -2.62616 | overlap 1878963 TCAGTTGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCGA TERM 2676 1879076 - 1879060 - T 81 -10.9 -2.62616 | opp_overlap 1879075 TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 2677 1879118 - 1879139 + T 95 -8.7 -5.4251 | CGCTCCAAATTTCAA TCCTTAGCC AAAA GGCTGGGGA TTTTTTCTATCTACA TERM 2678 1879236 - 1879204 - T 100 -12.2 -5.01732 | opp_overlap 1879204, overlap 1879208 AATTTTCTCAAAAAA TAAAGGCTTGTGAT TTAAT AACACAAGCCTTTA TTTTTATGCTTTCTT TERM 2679 1879204 - 1879236 + T 100 -12.2 -5.0809 | opp_overlap 1879204 1879208 AATTTTCTCAAAAAA TAAAGGCTTGTGAT TTAAT AACACAAGCCTTTA TTTTTATGCTTTCTT TERM 2680 1879232 - 1879208 - T 95 -8.6 -5.04249 | opp_overlap 1879204, overlap 1879204 TTCTCAAAAAATAAA GGCTTGTGAT TTAAT AACACAAGCC TTTATTTTTATGCTT wecA 1880307 - 1879240 - | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase glnD 1882973 - 1880382 - | PII uridylyl-transferase TERM 2681 1881360 - 1881338 - G 70 -8.4 -3.23216 | opp_overlap 1881343, overlap 1881340 CTTCAGGATCATGAA TATCACGGCG TTG CGCCGTAATT GACATCAGCAAATGG TERM 2682 1881358 - 1881340 - G 80 -11 -3.18023 | opp_overlap 1881343, overlap 1881338 TCAGGATCATGAATA TCACGGCG TTG CGCCGTAA TTGACATCAGCAAAT TERM 2683 1881343 - 1881355 + g 76 -10.5 -2.73364 | opp_overlap 1881340 1881338 GGATCATGAATATCA CGGCG TTG CGCCG TAATTGACATCAGCA TERM 2684 1882333 - 1882321 - G 72 -9.1 -3.3506 | overlap 1882312 GTCAAAGCCCCAGAA TGGCG CAA CGCCA CCCAATACAACAAAT TERM 2685 1882890 - 1882876 - G 76 -8.6 -3.85159 | opp_overlap 1882886, overlap 1882879 1882886 TCAAAAATGGAATAA CGAGAA AAA TTCTCG AGCTCAAATTGCTTG TERM 2686 1882886 - 1882908 + g 72 -5.6 -4.56093 | opp_overlap 1882876 1882886 1882879 AATAACGAGAAAAAT TCTCGAGC TCAAATT GCTTGAGA TTTTCTCGTTCAATT TERM 2687 1883027 - 1883044 + r 90 -11.3 -3.82505 | opp_overlap 1883027 AAAGAAAAACAAAAA GGGCGTA TATC TACGCCC TTATCTTATAATTTT TERM 2688 1883044 - 1883027 - R 100 -11.3 -5.77734 | opp_overlap 1883027 AAAGAAAAACAAAAA GGGCGTA TATC TACGCCC TTATCTTATAATTTT map 1883873 - 1883067 - | methionine aminopeptidase TERM 2689 1883313 - 1883291 - G 73 -7 -4.07568 | TTCCGGGTTTTAAAA TCACGCCG CCATCAT CGGCGTAA TAATGCAATACTTGA NTHI2029 1884009 - 1884353 + | iron-sulfur cluster insertion protein ErpA TERM 2690 1884420 - 1884382 - g 70 -8.3 -3.26545 | gap 1, opp_overlap 1884382 1884381, overlap 1884400 TTTACACATTATCAA GGCAATGTAT-CCGTCAA ATGT TCGATGGAACACATTGCC CTTGCTAACTGGTTC TERM 2691 1884478 - 1884445 - g 81 -10.4 -3.68024 | opp_overlap 1884445 TGGTTCAACACAGAA GTGCGGTCAAATTC AGACAA GATTTTAACCGCAC TTTCTACTGCAAAAT TERM 2692 1884445 - 1884478 + G 77 -8.2 -3.96327 | opp_overlap 1884445 TGGTTCAACACAGAA GTGCGGTCAAATTC AGACAA GATTTTAACCGCAC TTTCTACTGCAAAAT TERM 2693 1884649 - 1884665 + G 83 -7.3 -4.90918 | opp_overlap 1884637, overlap 1884651 GAAGAAAGCCTTGCT TTTTGCG GTA CGCAAGA TTTTATTCATTTTCT NTHI2030 1884355 - 1884708 + | hypothetical protein TERM 2694 1885880 - 1885894 + G 70 -2.8 -5.02074 | ACAAAATATCCAGTT TACTTG GCG CACGTA TTTTTTCCACAATGG TERM 2695 1885998 - 1885983 - g 70 -2.5 -5.10154 | overlap 1885984 ACTGAAAATGAAAAA TCCCC ATTTAG AGGGA GCGATGATTATAACG mrcB 1884715 - 1887060 + | penicillin-binding protein 1B hemH 1887185 - 1888105 + | phosphoribosylaminoimidazole-succinocarboxamide synthase argG 1888261 - 1889595 + | argininosuccinate synthase TERM 2696 1889646 - 1889605 - T 83 -6.2 -5.10765 | gap 2, opp_overlap 1889605 AAATAAATAATAAAA TCTGCATTTCAATGACTGAT ATTT AACA-TCAT-GAAATGCAGA TCCTTTCACAAAATA NTHI2035 1890859 - 1889666 - | manganese transporter NRAMP TERM 2697 1889832 - 1889816 - G 70 -7.3 -3.82864 | overlap 1889812 AGCTAACAAAATTAA TGCCAAT GCA ATCGGCA ATATTAAGCCATTTA TERM 2698 1890899 - 1890910 + r 78 -7.2 -4.29905 | TGTTATGTGTTTATT CGGC TTAT GCCG TTATTTTGATATGAT NTHI2036 1891640 - 1890903 - | hypothetical protein NTHI2037 1892556 - 1891627 - | allophanate hydrolase subunit 2 NTHI2038 1893194 - 1892553 - | allophanate hydrolase subunit 1 TERM 2699 1893044 - 1893031 - G 72 -2.3 -5.19261 | overlap 1893032 AAATCCACGAAAAAA TCGGT AAAA ACCGT AAGATTATTCATTCC TERM 2700 1893431 - 1893407 - R 100 -10.1 -5.56372 | opp_overlap 1893407 AAATTAAAAGAAAAA CCTGCTTTC TGGCATT GAAAGCAGG TTTTAGGCAAAAGGG TERM 2701 1893407 - 1893431 + r 87 -10.1 -4.07568 | opp_overlap 1893407 AAATTAAAAGAAAAA CCTGCTTTC TGGCATT GAAAGCAGG TTTTAGGCAAAAGGG rnb 1895435 - 1893456 - | exoribonuclease II TERM 2702 1894144 - 1894154 + g 76 -4 -5.24129 | AAGAAATGGTGTGCG TTCT CTA AGAA TTTTTTATCAAAACC TERM 2703 1895511 - 1895492 - R 100 -10 -4.5366 | TTAAAAAAGCGAAAA GGCAGACT GAAA AGCCTGCC TAAAAAAGAATGTAA fabI 1896420 - 1895533 - | enoyl-[acyl-carrier-protein] reductase TERM 2704 1896093 - 1896103 + g 73 -6.8 -4.26079 | AACGCTTACTTAATT CTGC AAA GCAG TTTTGGATGCTTTCA prfC 1896500 - 1898083 + | peptide chain release factor 3 TERM 2705 1898121 - 1898086 - T 100 -12 -4.4261 | opp_overlap 1898093 TCGCGAACATTAAAA TGACAAAGTGCGGTAA AATT CTACCGCACTTTTCCA GAAAAAAAGCGTTGA TERM 2706 1898093 - 1898114 + T 93 -10.2 -4.07568 | opp_overlap 1898086 CATTAAAATGACAAA GTGCGGTA AAATTC TACCGCAC TTTTCCAGAAAAAAA TERM 2707 1898125 - 1898156 + T 95 -8.9 -4.86731 | opp_overlap 1898130, overlap 1898130 CGCACTTTTCCAGAA AAAAAGCGTTGAA ATTTAA TTCAACGCTTTTC TTTTATTTAGAGAGA TERM 2708 1898130 - 1898151 + T 95 -8.8 -5.34857 | opp_overlap 1898130, overlap 1898125 TTTTCCAGAAAAAAA GCGTTGAA ATTTAA TTCAACGC TTTTCTTTTATTTAG TERM 2709 1898151 - 1898130 - T 95 -8.8 -5.60993 | opp_overlap 1898130 1898125 TTTTCCAGAAAAAAA GCGTTGAA ATTTAA TTCAACGC TTTTCTTTTATTTAG NTHI2045 1898392 - 1898159 - | hypothetical protein TERM 2710 1898485 - 1898474 - R 70 -4.4 -4.69868 | AGATAAGAAAAAGAA GCAA CCGT TTGC AAGGGAAATTTATAT NTHI2046 1898824 - 1898495 - | putative branched-chain amino acid permease NTHI2047 1899555 - 1898821 - | putative branched-chain amino acid permease metR 1900494 - 1899565 - | HTH-type transcriptional regulator MetR TERM 2711 1900636 - 1900603 - R 100 -11.9 -4.1899 | opp_overlap 1900603 1900610, overlap 1900589 1900610 TTATTTTAGTTAAAA TACAAAACCCCAGTC CTTA AACTGGGGTTCTATA TTTATTCTTTATCTA TERM 2712 1900603 - 1900636 + r 80 -6.8 -4.65458 | opp_overlap 1900589 1900603 1900610, overlap 1900610 TTATTTTAGTTAAAA TACAAAACCCCAGT CCTTAA ACTGGGGTTCTATA TTTATTCTTTATCTA TERM 2713 1900629 - 1900610 - R 100 -10 -4.90471 | opp_overlap 1900610 1900603, overlap 1900603 AGTTAAAATACAAAA CCCCAGTC CTTA AACTGGGG TTCTATATTTATTCT TERM 2714 1900610 - 1900629 + r 81 -9.3 -3.84463 | opp_overlap 1900603 1900610, overlap 1900603 AGTTAAAATACAAAA CCCCAGT CCTTAA ACTGGGG TTCTATATTTATTCT TERM 2715 1900672 - 1900714 + r 78 -2.2 -5.68438 | opp_overlap 1900678 1900683, overlap 1900684 TTTAATTCTGTTTTT ACTTAATTTAATTTTATCTA TCT TAGATAAATTTATATTTAGA TTTTTTATTTGGTAA TERM 2716 1900684 - 1900702 + r 81 -7.6 -4.37554 | opp_overlap 1900683 1900678, overlap 1900672 TTTACTTAATTTAAT TTTATCTA TCT TAGATAAA TTTATATTTAGATTT TERM 2717 1902696 - 1902710 + r 80 -7.1 -4.58213 | overlap 1902687 TGGTCTTCCGGCGAA CGGGT TTTTC ACCCG TTTTATCGTTACTTA TERM 2718 1904517 - 1904496 - R 76 -3.9 -5.24291 | AAAACTAAAACAAAA TTAAATTTA AAAT TAAACTTAA AATAACCTAATATTT TERM 2719 1904952 - 1904935 - R 74 -9.1 -3.07291 | opp_overlap 1904935 AAGGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC TERM 2720 1906518 - 1906499 - R 74 -5.8 -4.61868 | TAGCTATACATAAAA CACTACTT AAAA AAGTAATG ATGAATTTTCAGTTA TERM 2721 1906679 - 1906632 - R 70 -2.3 -5.32699 | gap 3, opp_overlap 1906670, overlap 1906635 TTAAAGAGCAAAAAA TAACGACGCAC--TTG-GAAACTT AAA AAACTTCACAACAGTGCGTCGTTG TGTGCGGTGCATTAT lldD 1907970 - 1906825 - | L-lactate dehydrogenase TERM 2722 1907539 - 1907554 + g 77 -6.1 -4.72272 | ACAGCCTGCTGCTTT CGCAC GCTCAA GTGCG TTTTTCATAAAACCA TERM 2723 1907936 - 1907924 - G 78 -10.5 -3.19178 | overlap 1907922 ATAAAGGGAGGAACA CGGCG GCG CGCCG CTTCACGATAATCGC murI 1908991 - 1908182 - | glutamate racemase recG 1911102 - 1909021 - | ATP-dependent DNA helicase spoT 1913213 - 1911099 - | guanosine-3',5'-bis 3'-pyrophosphohydrolase rpoZ 1913552 - 1913286 - | DNA-directed RNA polymerase subunit omega gmk 1914241 - 1913615 - | guanylate kinase