TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.590143 %AT, 1752367 nt, 11535 terms. Intergenic: 0.633686 %AT, H2T: 311772 nt, 2796 terms; T2T: 136717 nt, 2537 terms; H2H: 89293 nt, 1440 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|219870279|ref|NC_011852.1| Haemophilus parasuis SH0165, complete genome (length 2269156) TERM 1 575 - 555 - g 86 -4.7 -5.49569 | overlap 556 CAGCAACACAAAAAA CTGTTGATG GTC CATCAGCAA AAGACTGGCGCGGTG gapA 2 - 1021 + | glyceraldehyde-3-phosphate dehydrogenase TERM 2 1043 - 1068 + F 100 -9.2 -5.36441 | opp_overlap 1043 TAGTAATATTGGAAA TGGCAATATA TAAATC TATATTGCCA TTTTTTATATAGAAA TERM 3 1068 - 1043 - f 81 -9.2 -3.67517 | opp_overlap 1043 TAGTAATATTGGAAA TGGCAATATA TAAATC TATATTGCCA TTTTTTATATAGAAA TERM 4 1860 - 1833 - f 76 -5.8 -4.62069 | opp_overlap 1833 1836 TTTTTATCTTAAAAA TAATCAACTT TTATATTG AAGTTGATTA TTTAAAATGTTATAA gyrA 1967 - 4633 + | DNA gyrase subunit A TERM 5 4666 - 4634 - T 82 -10.7 -3.61089 | opp_overlap 4636, overlap 4628 4635 4638 4642 GTTGAAGAAGCATAA TTTATTAAGGCTGTG ATT CACAGCCTTAATATT TTGTAAGATAATGCC TERM 6 4665 - 4635 - T 100 -14.2 -2.76171 | opp_overlap 4636, overlap 4634 4628 4638 4642 TTGAAGAAGCATAAT TTATTAAGGCTGTG ATT CACAGCCTTAATAT TTTGTAAGATAATGC TERM 7 4636 - 4664 + T 100 -17.7 -4.40804 | opp_overlap 4635 4634 4628 4638 4642 TGAAGAAGCATAATT TATTAAGGCTGTG ATT CACAGCCTTAATA TTTTGTAAGATAATG TERM 8 4662 - 4638 - T 100 -15.9 -2.64462 | opp_overlap 4636, overlap 4635 4634 4628 4642 AAGAAGCATAATTTA TTAAGGCTGTG ATT CACAGCCTTAA TATTTTGTAAGATAA TERM 9 4658 - 4642 - T 87 -12.3 -3.23979 | opp_overlap 4636, overlap 4638 4635 4634 4628 AGCATAATTTATTAA GGCTGTG ATT CACAGCC TTAATATTTTGTAAG TERM 10 4771 - 4734 - T 84 -7.9 -4.57341 | gap 1, opp_overlap 4735 4737, overlap 4735 4737 AAGTGTTGGTAAAAA GTAGGCT-AAAGCCTTAT AGT ACAAGGCTTTAAGCCCAT TTTTTGAAATATGAA TERM 11 4770 - 4735 - T 85 -11.4 -3.33922 | gap 1, opp_overlap 4735 4737, overlap 4734 4737 AGTGTTGGTAAAAAG TAGGCT-AAAGCCTTAT AGT ACAAGGCTTTAAGCCCA TTTTTTGAAATATGA TERM 12 4735 - 4770 + T 90 -7 -5.07567 | gap 1, opp_overlap 4735 4734 4737, overlap 4737 AGTGTTGGTAAAAAG TAGGC-TAAAGCCTTAT AGT ACAAGGCTTTAAGCCCA TTTTTTGAAATATGA TERM 13 4768 - 4737 - T 84 -11.8 -3.23708 | gap 1, opp_overlap 4735 4737, overlap 4735 4734 TGTTGGTAAAAAGTA GGCT-AAAGCCTTAT AGT ACAAGGCTTTAAGCC CATTTTTTGAAATAT TERM 14 4737 - 4768 + T 73 -9.6 -2.77567 | gap 1, opp_overlap 4737 4735 4734, overlap 4735 TGTTGGTAAAAAGTA GGC-TAAAGCCTTAT AGT ACAAGGCTTTAAGCC CATTTTTTGAAATAT TERM 15 5183 - 5153 - T 100 -18.6 -3.62096 | overlap 5156 5173 GTCTACTATGCCAAA CAATGCCATTGTTA AAA TAACAATGGCATTG AGCATGAAATTCTAA TERM 16 5180 - 5156 - T 100 -14.5 -3.94634 | overlap 5153 5173 TACTATGCCAAACAA TGCCATTGTTA AAA TAACAATGGCA TTGAGCATGAAATTC TERM 17 6176 - 6188 + T 73 -9.1 -3.42574 | CCGAATTTCCAGTTG GACCC GCA GGGTC TTGTGATCCCGTTGG TERM 18 6218 - 6271 + T 100 -14.3 -3.74347 | overlap 6193 6219 GACCCGCAGGGCCTT GTGGCCCCGTTGGACCCGCAGGACC TTGT GGTCCCGCTGGACCCGCAGGGCCAG TTTCACCTTTCTGAC TERM 19 6219 - 6270 + T 100 -17.8 -2.84126 | overlap 6193 6218 ACCCGCAGGGCCTTG TGGCCCCGTTGGACCCGCAGGACC TTGT GGTCCCGCTGGACCCGCAGGGCCA GTTTCACCTTTCTGA TERM 20 6577 - 6632 + T 93 -13 -3.4252 | opp_overlap 6592 GGACCAGCAGCCCCT GCTGGACCCACAGGACCAGGTGGACC CGCA GGACCTCGTGGTCCTGCTGGACCCGC TTGTCCTGGATCGCC TERM 21 6635 - 6592 - T 78 -10.8 -2.64616 | opp_overlap 6577 GCTGGACCCACAGGA CCAGGTGGACCCGCAGGACC TCGT GGTCCTGCTGGACCCGCTTG TCCTGGATCGCCTTT TERM 22 6905 - 6889 - T 84 -12.3 -2.78463 | ATTGGTCCTACTAGA CCAGCAG CCC CTGCTGG ACCCATAGGACCAGG TERM 23 7522 - 7538 + T 78 -9.5 -3.55622 | opp_overlap 7516 CCAATATTATTACCA TCAACAC TTT GTGTTGA TTTAAAGCCGTTAGC TERM 24 8299 - 8309 + T 72 -8.2 -3.51924 | GCTTGTTCAATATTT GCCG CAT CGGC TTGTCTGCCTAAGAC HAPS_0004 9094 - 8972 - | hypothetical protein TERM 25 9108 - 9071 - G 100 -12.3 -4.58283 | gap 1, opp_overlap 9071 CAATGTTGGTAAAAA GTGAGCT-AAAGCCTTAT AGT ACAAGGCTTTAAACTCAC TTTTGAAGAATATAC TERM 26 9071 - 9108 + g 75 -7.9 -4.10657 | gap 1, opp_overlap 9071 CAATGTTGGTAAAAA GTGAG-CTAAAGCCTTAT AGT ACAAGGCTTTAAACTCAC TTTTGAAGAATATAC TERM 27 9157 - 9144 - H 76 -2.4 -5.51046 | TAAATATAGAAAAAA CAAC AAATAG GTTG GAAGGGTTATTTAAA TERM 28 10290 - 10278 - g 70 -9.1 -3.14931 | opp_overlap 10278 GTGACGGTTTATCAA TGGCG TAT CGCCA CGGCGTGCCACTTCG frdA 9632 - 11416 + | fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit frdB 11423 - 12193 + | fumarate reductase (anaerobic), Fe-S subunit frdC 12206 - 12598 + | fumarate reductase (anaerobic), membrane anchor subunit C frdD 12609 - 12953 + | fumarate reductase (anaerobic), membrane anchor subunit D TERM 29 13048 - 13074 + T 89 -11 -4.03234 | opp_overlap 13047 AGCTCATATAATTAG GACATCTACAGT ATA AATGTAGATGTC TTTCTATGAGGAAAC cysZ 14027 - 13272 - | putative sulfate transport protein CysZ involved in cysteine biosynthesis TERM 30 13685 - 13697 + g 70 -3.4 -4.84359 | overlap 13682 GATTTTTCCCCGTGA GTTG TTGCT CAAC TTTTTCTGCGAGTAA zipA 14136 - 14954 + | cell division protein ZipA TERM 31 14995 - 14978 - f 78 -11.3 -2.61322 | opp_overlap 14978, overlap 14977 14975 14980 ACATTGTTTAAATAT GACCGCT TGCA AGCGGTC TTTTTTATCGAGAAA TERM 32 14978 - 14995 + F 100 -11.3 -5.24129 | opp_overlap 14978 14977 14975 14980 ACATTGTTTAAATAT GACCGCT TGCA AGCGGTC TTTTTTATCGAGAAA ligA 15018 - 17045 + | NAD-dependent DNA ligase LigA recQ 18932 - 17103 - | ATP-dependent DNA helicase RecQ, superfamily II cyaY 19240 - 18932 - | frataxin-like protein implicated in iron transport lexA 19952 - 19323 - | LexA repressor/SOS-response transcriptional repressors (RecA-mediated autopeptidases) TERM 33 20076 - 20096 + r 100 -15.5 -4.4959 | opp_overlap 20072 20071 GCTTAATTAACGGCA CGGACACAC TGC GTGTGTCCG TTTTCATTAGTTGAG pykF 21147 - 20146 - | pyruvate kinase/FOG: TPR repeat, Sel1 subfamily TERM 34 20227 - 20208 - G 76 -7.2 -4.19678 | opp_overlap 20208 CCATATCGCAAGAAA TGCCAAAA TAGG CTTTGGCA TAATATTTTAAATCC HAPS_0016 21735 - 21151 - | hypothetical protein HAPS_0017 22492 - 21737 - | Sel1 domain protein, repeat-containing protein TERM 35 22997 - 22975 - g 78 -2.6 -5.41746 | overlap 22977 AATTTTGCAAAAAAA CTGCCAAGCT CTG AACTTGCCTG ATCCGCTGGTAAATA plsB 22799 - 25234 + | glycerol-3-phosphate acyltransferase TERM 36 25261 - 25292 + F 78 -5.3 -4.92812 | opp_overlap 25261 TTTCTAATTAAATAT TGTAGGAATAC TTGATGAGTT GTGTTCCTACA TTTCTTTTCTTGTGG TERM 37 25704 - 25689 - g 76 -3.3 -5.22039 | opp_overlap 25689 25697 CGCAAACCGAAAAAA TTACC TCGTGC GGTAA TTTCGCAATCTTATG apt 25428 - 25970 + | adenine phosphoribosyltransferase TERM 38 26012 - 25993 - f 74 -7.8 -3.96705 | opp_overlap 25993, overlap 25994 CTTATAAAATTCAAA TGGTGGGT TAAA ACCCACCC TACATTTTTATTTAG TERM 39 26011 - 25994 - f 79 -11.3 -2.973 | opp_overlap 25993, overlap 25993 TTATAAAATTCAAAT GGTGGGT TAAA ACCCACC CTACATTTTTATTTA TERM 40 27475 - 27438 - g 88 -7.8 -5.08088 | gap 1 AACGGTGAATAAAAA GAGCGTTCAGCAAGGTT TAATG AACCTAG-TGACCGCTC AAGATCAACGGCAAC dnaX 26035 - 28047 + | DNA polymerase III subunits gamma and tau HAPS_0021 28053 - 28949 + | ABC-type multidrug transport system, ATPase component HAPS_0022 28971 - 29726 + | ABC-type multidrug transport system, permease component stbD 29816 - 30097 + | putative plasmid stability protein StbD, antitoxin of toxin-antitoxin stability system stbE 30094 - 30378 + | putative plasmid stability protein StbE, addiction module antitoxin TERM 41 30430 - 30405 - f 100 -7.6 -5.75599 | GAAACCATAAAAAAA CCCGATACCA AAAAAA CAGTATCGGG GGAGGTCTTACCTAA TERM 42 31607 - 31629 + G 73 -2.1 -5.24129 | gap 1, opp_overlap 31594, overlap 31610 31611 ATCACAAAAAAACCT TGTGCGAGAA AAGG TTCTCG-ATA TTTTTTCTGAAGAAA sbcB 30765 - 32138 + | exonuclease I HAPS_0026 32221 - 33180 + | hypothetical protein TERM 43 33219 - 33190 - f 78 -6.5 -4.62561 | gap 1, opp_overlap 33191, overlap 33192 CAATAAAGAAAATAA TCGTAGGGACACAC TGC GTGTGTCCGT-CAA CGTATGTCTGTTGAT TERM 44 33281 - 33263 - f 72 -9.6 -2.60075 | overlap 33262 TTTGTTGGAACGAAT GGACACAC GCA GTATGTCC CTACAAAATGGTATA trpH 33329 - 34150 + | metal-dependent phosphoesterase ilvH 34748 - 34257 - | acetolactate synthase 3 regulatory subunit ilvI 36438 - 34741 - | acetolactate synthase 3 catalytic subunit TERM 45 36409 - 36399 - G 70 -3.2 -4.8622 | CTGGGTAACCAAAAA CGTA TTC CACG CCTTCGTCACGCAAG leuB 36776 - 37858 + | 3-isopropylmalate dehydrogenase TERM 46 38048 - 38073 + T 100 -11.3 -4.84527 | opp_overlap 38048 TCTTTTATTAAAAAA GGTTAAAGCTT CATC AGGCTTTAACC TTTTTACTATGTCGC TERM 47 38073 - 38048 - T 100 -9.1 -5.14563 | opp_overlap 38048 TCTTTTATTAAAAAA GGTTAAAGCTT CATC AGGCTTTAACC TTTTTACTATGTCGC TERM 48 38142 - 38118 - T 100 -9.4 -5.1861 | opp_overlap 38118 38121 TGCACTATCAAAAAA TAAGCAACCC TTACC GAGTTGCTTA TTAATTTTACCGCTA acrB 41263 - 38174 - | acriflavine resistance protein, cation/multidrug efflux pump acrA 42480 - 41275 - | possible acridine efflux pump AcrA, RND efflux membrane-fusion protein TERM 49 41961 - 41973 + g 80 -7.7 -4.40358 | CATAAATTTGACGAC GCTCA ATC TGAGC TTTTGTCGCCTCAAT acrR 43084 - 42503 - | transcriptional regulator acrR protein TERM 50 43149 - 43135 - H 91 -5.8 -5.64274 | TTACTGAGAAAAAAA GATTTT CGC AAAATC TAAAGTTCAAGTTTT TERM 51 44781 - 44770 - g 74 -4.4 -4.94811 | CCAAAAACAAACAAA CGAT TGGT ATCG GTGCAGGACAAATGA TERM 52 44870 - 44882 + G 70 -7.7 -3.6849 | GGCAGGCTGTGTAAT GGCAT CTG ATGCC TTCTTCCCATTCCGT purH 43443 - 45041 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase metC 46307 - 45117 - | cystathionine beta-lyases/cystathionine gamma-synthase ogt 46867 - 46304 - | methylated DNA-protein cysteine methyltransferase TERM 53 46911 - 46888 - R 100 -9.6 -5.09259 | gap 1 TATCCTAAAACAAAA GGCGTGC-CAC TTA GTGTACACGCC TCAGGTTGCTGACAA ompP1 48542 - 47253 - | long-chain fatty acid transport protein P1/47 kDa outer membrane protein precursor TERM 54 47970 - 47956 - G 70 -7.8 -3.70149 | opp_overlap 47951 GCCATAGGATTTAAA GCACCA AAA TGGCGC TCTAATGTTGCTTTT mutS 48840 - 49115 + | possible DNA mismatch repair protein HAPS_0039 49279 - 49749 + | hypothetical protein TERM 55 49812 - 49833 + F 100 -15.9 -3.0263 | CCGCCCTTCGGGCAC CTTCCCCCG TAAA CGGGGGAAG TATTAAAAAAGTAAT TERM 56 49892 - 49867 - f 100 -8.3 -5.0916 | overlap 49869 GTCTGAAGATAAAAA TACTTCTCCCA TTTA TGGGGGAAGCA TTAAAAAAGTAATGT TERM 57 49890 - 49869 - f 81 -8.7 -4.17211 | overlap 49867 CTGAAGATAAAAATA CTTCTCCCA TTTA TGGGGGAAG CATTAAAAAAGTAAT TERM 58 49948 - 49924 - f 74 -3.6 -5.0916 | gap 1, opp_overlap 49926, overlap 49926 GTCTGAAGATAAAAA TTCTTCCCTCA TCTA TG-GGGAAGTA TTAAAAAAGTAATGT TERM 59 50005 - 49980 - f 88 -7.5 -4.74103 | overlap 49981 49982 GTCTGAAGGTAAAAA TTCTTCCCCCA TTTA TGGGGGAAGTC CCCGAGCGATAGCGA TERM 60 50004 - 49981 - f 82 -11 -3.4398 | overlap 49980 49982 TCTGAAGGTAAAAAT TCTTCCCCCA TTTA TGGGGGAAGT CCCCGAGCGATAGCG TERM 61 50003 - 49982 - f 95 -14.5 -2.65906 | overlap 49981 49980 CTGAAGGTAAAAATT CTTCCCCCA TTTA TGGGGGAAG TCCCCGAGCGATAGC neuA 50051 - 50731 + | CMP-N-acetylneuraminic acid synthetase TERM 62 50857 - 50871 + G 76 -4.3 -5.08601 | ATTATCAAACATTTT TAGCA TTATT TGCTA TTTTTATTGGACTAA lsgA 50718 - 51914 + | putative lipooligosaccharide flippase TERM 63 52070 - 52090 + G 70 -2.7 -5.02323 | overlap 52072 TCTTTGTAAGAAGAA TGTTTTTTT CTT AAAAAAATG TTTTATTTCTCCTAA TERM 64 52672 - 52687 + G 71 -4.8 -4.53705 | opp_overlap 52672 ATATAAAAAGTAAAT TAATCT TTGA AGATTA TTTTGTATCGCAGTT lsgB 51915 - 52883 + | CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase/lipopolysaccharide biosynthesis protein TERM 65 52928 - 52940 + G 80 -7.7 -4.36366 | opp_overlap 52928, overlap 52939 ATATTCTTAATTATA GCAAC ATT GTTGC TTTCTATATTTTCTA HAPS_0043 52895 - 53902 + | hypothetical protein wcwK 54105 - 55136 + | glycosyltransferase/capsular polysaccharide phosphotransferase wcwK (stealth protein wcwK) TERM 66 55506 - 55495 - g 75 -3 -5.31519 | opp_overlap 55495 ATATTTAAATAAAAA TCAA TCTA TTGA TGTTGTTGGTACTTG wcfQ 55154 - 55972 + | extracellular polysaccharide glycosyltransferase (cell wall biogenesis) wbgX 55980 - 57131 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 67 57176 - 57205 + G 93 -7.2 -5.3798 | gap 1, overlap 57182 TTGATATTTTCTTTT CAGG-ATTAGGGC TTGTC GCCCTATTTCCTG TTTTTGTTGTTATTG TERM 68 57182 - 57198 + G 77 -8 -4.17513 | overlap 57176 TTTTCTTTTCAGGAT TAGGGC TTGTC GCCCTA TTTCCTGTTTTTGTT TERM 69 57696 - 57714 + G 79 -6.8 -4.60889 | TATATGGGGTGATTT TGTTCTTG TTC TAAGAACA TTTTTAAAAATAGTT wbgY 57145 - 57738 + | putative glycosyltransferase/lipopolysaccharide biosynthesis protein TERM 70 58864 - 58894 + G 85 -9.3 -4.20516 | opp_overlap 58868 AAGGGAGTGTTTCTA TCAATGATGTTAA AGAGG TTAATATCATTGA TTTGTTAGGTAGAGA capD 58104 - 60044 + | polysaccharide biosynthesis protein CapD wza 60308 - 61462 + | polysaccharide export protein, periplasmic protein involved in capsular polysaccharide export ptp 61466 - 61909 + | cytoplasmic tyrosine phosphatase TERM 71 63933 - 63945 + G 70 -2.7 -5.10933 | overlap 63934 63940 TTGAACGTGCAGGGG TCTTT ATT AAAGG TTTTATTTTGAATGG wzs 61928 - 64015 + | tyrosine kinase, chain length regulator in capsular polysaccharide biosynthesis HAPS_0052 64250 - 64696 + | HTH-type transcriptional regulator, BadM/Rrf2 family iscS 64728 - 65948 + | cysteine desulfurase TERM 72 65983 - 65956 - f 78 -7.8 -4.24384 | gap 1, opp_overlap 65958 ATCATTAAAATGAAA TTCTTCC-CCCAT GTA ATGGGGGGAAGTA CCTTGCGAAGCAAGG TERM 73 65958 - 65981 + F 75 -10.4 -2.52464 | gap 1, opp_overlap 65956 CATTAAAATGAAATT CTTCC-CCCAT GTA ATGGGGGGAAG TACCTTGCGAAGCAA TERM 74 65998 - 65984 - f 74 -10 -2.71681 | TAATGGGGGGAAGTA CCTTGC GAA GCAAGG TGATGGGGGCAAATA TERM 75 66091 - 66070 - f 81 -11.5 -2.70932 | CGCTTCGCTCAACCA CTTCCCCCG TAAA CGGGGGCAG AATAAAACAGAGGAA TERM 76 66166 - 66152 - g 80 -7.8 -4.32034 | opp_overlap 66152 TGATCACTATGAAAA CCCACG TAA CGTAGG TTCATTCGACAAAAA TERM 77 66396 - 66383 - g 71 -3.7 -4.93547 | TCAAGCAATCAAAAA CAGCG ACAT CGCAG AAGAGCTTGAATTAC iscU 66114 - 66497 + | scaffold protein, NifU-like protein involved in Fe-S cluster formation TERM 78 66503 - 66550 + F 100 -8.6 -4.71708 | gap 1, overlap 66505 CGGTAAGTAATCTTT AACAAGCGGTTGGTTTTTGCGAA AAA TTTGCAAAT-CTGACCGCTTGTG TTTTCGTTTATTGTT TERM 79 66505 - 66548 + F 89 -11.2 -3.94086 | gap 1, overlap 66503 GTAAGTAATCTTTAA CAAGCGGTTGGTTTTTGCGAA AAA TTTGCAAAT-CTGACCGCTTG TGTTTTCGTTTATTG iscA 66828 - 67151 + | iron-binding protein, HesB family iron-sulfur (Fe-S) cluster formation protein TERM 80 67518 - 67496 - g 89 -5.6 -5.42265 | gap 1, opp_overlap 67500 TGAAACCACAAAAAA CG-AAGCGG ATCTCA CCGCTTTCG CCCAAGAGATTGAAC hscB 67161 - 67682 + | co-chaperone HscB/dnaJ-domain-containing proteins 1 TERM 81 67711 - 67732 + F 77 -10.1 -3.13743 | opp_overlap 67711 67709 67708 67712 GCACAAAAGAAAGTA GGGACGCCA CGCT TGGCGTCCA TTGAATATAGACTTT TERM 82 67732 - 67711 - f 77 -10.1 -3.28878 | opp_overlap 67711, overlap 67709 67708 67712 GCACAAAAGAAAGTA GGGACGCCA CGCT TGGCGTCCA TTGAATATAGACTTT TERM 83 67731 - 67712 - f 91 -13.6 -2.56242 | opp_overlap 67711, overlap 67711 67709 67708 CACAAAAGAAAGTAG GGACGCCA CGCT TGGCGTCC ATTGAATATAGACTT TERM 84 67764 - 67785 + F 84 -10.1 -3.6914 | opp_overlap 67764 67765, overlap 67765 CACTCATCTAAAGAA TGGACGCCA AGCG TGGCGTCCC TTGTATATTAAAATT TERM 85 67785 - 67764 - f 85 -10.1 -3.9693 | opp_overlap 67764 67765, overlap 67765 CACTCATCTAAAGAA TGGACGCCA AGCG TGGCGTCCC TTGTATATTAAAATT TERM 86 67784 - 67765 - f 100 -13.6 -2.97676 | opp_overlap 67765 67764, overlap 67764 ACTCATCTAAAGAAT GGACGCCA AGCG TGGCGTCC CTTGTATATTAAAAT TERM 87 67765 - 67784 + F 100 -13.6 -2.80761 | opp_overlap 67764 67765, overlap 67764 ACTCATCTAAAGAAT GGACGCCA AGCG TGGCGTCC CTTGTATATTAAAAT TERM 88 68789 - 68760 - g 88 -11.5 -3.53761 | opp_overlap 68740 GAACCTGTTTTTAAA GCCTTTTACACCC GATT GGTTGCAAAAGGC AAAGCGAAGAAAGTC HAPS_0057 67947 - 68918 + | ISNme5, family IS110 hisS 68965 - 69600 + | histidyl-tRNA synthetase TERM 89 69633 - 69606 - f 88 -11.2 -3.76048 | overlap 69607 GGTGAATTAACATAA TCCCTTCCCCCG TAAA CGGGGGAAGGTG CCGAAGGCGGATGGG TERM 90 69632 - 69607 - f 100 -14.7 -2.85147 | overlap 69606 GTGAATTAACATAAT CCCTTCCCCCG TAAA CGGGGGAAGGT GCCGAAGGCGGATGG TERM 91 69723 - 69752 + F 74 -9.9 -2.59431 | opp_overlap 69713, overlap 69718 ACAATCCCCCCTCCC TAGCCCTCCCTCG TAAA CGGGGGAGGGGAA TGAGTTATAGAGAGA TERM 92 69819 - 69809 - g 70 -8.2 -3.64609 | CAGAACCAGGGCAAA CGGC AGT GCCG CACCAACATCGCTTG TERM 93 70216 - 70204 - g 70 -3.3 -4.8543 | CAATTTGCAGAAAAA CGCTT AGC AGGCG AATTGGCTGGCGTGG TERM 94 71326 - 71314 - g 73 -7.7 -3.89412 | ACTGAAATGATTAAA TCGTC AAT GACGA ATGCGAAGCAAGATA hscA 69775 - 71451 + | chaperone protein HscA TERM 95 71697 - 71639 - f 100 -26.4 -2.69151 | gap 1, opp_overlap 71650, overlap 71650 71672 71675 71676 TCTTCTGATATACCA GTAGGGACACACTGCGTGTGTCCGCAA AATAAA TAACGGACACACGCAGTGTGTCCCTA- CAAATAAACAGAAGA TERM 96 71650 - 71687 + F 100 -14.3 -2.91383 | opp_overlap 71639 71650 71672 71675 71676 ACCAGTAGGGACACA CTGCGTGTGTCCG CAAAATAAATAA CGGACACACGCAG TGTGTCCCTACAAAT TERM 97 71687 - 71650 - f 100 -16.4 -2.92642 | opp_overlap 71650, overlap 71639 71672 71675 71676 ACCAGTAGGGACACA CTGCGTGTGTCCGCAA AATAAA TAACGGACACACGCAG TGTGTCCCTACAAAT TERM 98 71697 - 71672 - f 84 -7.7 -4.64861 | gap 1, opp_overlap 71650, overlap 71650 71639 71675 71676 TGTCCGCAAAATAAA TAACGGACACAC GCA GTGTGTCC-CTA CAAATAAACAGAAGA TERM 99 71695 - 71675 - f 91 -9.7 -4.43397 | opp_overlap 71650, overlap 71650 71639 71672 71676 CCGCAAAATAAATAA CGGACACAC GCA GTGTGTCCC TACAAATAAACAGAA TERM 100 71694 - 71676 - f 95 -13.2 -3.24954 | opp_overlap 71650, overlap 71650 71675 71639 71672 CGCAAAATAAATAAC GGACACAC GCA GTGTGTCC CTACAAATAAACAGA fdx 71727 - 72068 + | ferredoxin, 2Fe-2S type, ISC system iscX 72068 - 72262 + | FeS assembly protein IscX TERM 101 72326 - 72281 - T 81 -8.6 -4.09243 | opp_overlap 72281 72280 72285 72287, overlap 72287 CATAGGGCTGTAAAA CAAAAAGTTGGTAATAATTA TATTCC TGATTCTTACCAACTCTTTG ATTTAAATAGTTCTT TERM 102 72320 - 72287 - T 81 -4 -5.45802 | opp_overlap 72287 72285 72281 72280, overlap 72281 GCTGTAAAACAAAAA GTTGGTAATAATTA TATTCC TGATTCTTACCAAC TCTTTGATTTAAATA TERM 103 73030 - 73001 - T 88 -7.9 -4.72029 | gap 1, opp_overlap 73001 73001, overlap 73002 TGCAAGGTAATAAAA TGTAGCGGACACAC TCA GTGCGTCC-CTACC ATTTGAAAAGAAACT TERM 104 73029 - 73002 - T 85 -11.4 -3.42494 | gap 1, opp_overlap 73001 73001, overlap 73001 GCAAGGTAATAAAAT GTAGCGGACACAC TCA GTGCGTCC-CTAC CATTTGAAAAGAAAC luxS 73577 - 73068 - | S-ribosylhomocysteinase/S-ribosylhomocysteinase lyase involved in autoinducer AI2 synthesis TERM 105 73741 - 73758 + H 79 -7.1 -4.37711 | ATAATCGCCCGTCTT TTGTGAT CTTC ATCACAA TTTTGGATTTCGTCA TERM 106 73773 - 73792 + H 93 -6.4 -5.56673 | overlap 73774 ATTTTGGATTTCGTC AGATGAGC TTTA GCTCATCA TTTTTTATTCTCGGT TERM 107 73774 - 73791 + H 85 -9.9 -3.92377 | overlap 73773 TTTTGGATTTCGTCA GATGAGC TTTA GCTCATC ATTTTTTATTCTCGG typA 73841 - 75688 + | GTP-binding protein/membrane GTPase involved in stress response TERM 108 75695 - 75716 + F 70 -8.7 -3.01125 | opp_overlap 75695 75696 75698, overlap 75692 ACGAAGTAATGAGAA GTAGGGGCA ACAA TGCCCCTAA TAATTTATAGGAGAT TERM 109 75716 - 75695 - f 75 -8.7 -3.57128 | opp_overlap 75692 75695, overlap 75696 75698 ACGAAGTAATGAGAA GTAGGGGCA ACAA TGCCCCTAA TAATTTATAGGAGAT TERM 110 75715 - 75696 - f 83 -12.2 -2.73554 | opp_overlap 75695 75692, overlap 75695 75698 CGAAGTAATGAGAAG TAGGGGCA ACAA TGCCCCTA ATAATTTATAGGAGA TERM 111 75713 - 75698 - f 77 -10.4 -2.90562 | opp_overlap 75695 75692, overlap 75696 75695 AAGTAATGAGAAGTA GGGGCA ACAA TGCCCC TAATAATTTATAGGA grxA 75737 - 76000 + | glutaredoxin 1 TERM 112 76153 - 76122 - T 83 -11.8 -3.01243 | opp_overlap 76123, overlap 76119 76129 TTTATATAAGAATTA GGTTAAAGCCTTAT TGTT ATAAGGCTTTAACT TTCTAATCAACAAAA TERM 113 76123 - 76152 + T 100 -15.3 -3.96148 | opp_overlap 76122 76119 76129 TTATATAAGAATTAG GTTAAAGCCTTAT TGTT ATAAGGCTTTAAC TTTCTAATCAACAAA TERM 114 76146 - 76129 - T 74 -8.5 -3.6501 | opp_overlap 76123, overlap 76122 76119 AAGAATTAGGTTAAA GCCTTAT TGTT ATAAGGC TTTAACTTTCTAATC HAPS_0066 76736 - 76392 - | hypothetical protein TERM 115 78026 - 78011 - g 77 -4.8 -4.98531 | opp_overlap 78011 CGCTGAAATGAAAAA TGAAAT GGCA ATTTCA ATTCCTTATGCTGCA cydA 77166 - 78716 + | cytochrome D ubiquinol oxidase, subunit I cydB 78730 - 79878 + | cytochrome D ubiquinol oxidase, subunit II TERM 116 80042 - 80018 - g 93 -12.9 -3.43676 | opp_overlap 80018 80022, overlap 80022 TCTATCAACTCACAA GAAAGGGCTGG CTA CAAGCCCTTTC TTTTATCCTTTCTAT TERM 117 80018 - 80042 + G 100 -12.9 -4.6575 | opp_overlap 80018 80022, overlap 80022 TCTATCAACTCACAA GAAAGGGCTGG CTA CAAGCCCTTTC TTTTATCCTTTCTAT TERM 118 80022 - 80038 + G 86 -7.9 -4.84219 | opp_overlap 80018 80022, overlap 80018 TCAACTCACAAGAAA GGGCTGG CTA CAAGCCC TTTCTTTTATCCTTT TERM 119 80038 - 80022 - g 80 -7.9 -4.35604 | opp_overlap 80022 80018, overlap 80018 TCAACTCACAAGAAA GGGCTGG CTA CAAGCCC TTTCTTTTATCCTTT HAPS_0069 79990 - 80280 + | hypothetical protein TERM 120 80290 - 80315 + F 77 -10.6 -2.8383 | opp_overlap 80289 80290 80293 80296, overlap 80293 80296 CATTAGCCTTTAAAT TAAGAACCCA AAGCAA TGGGTTCTTA TCATATTGCTTGTTT TERM 121 80315 - 80290 - f 76 -10.6 -2.73441 | opp_overlap 80290 80293 80296, overlap 80289 80293 80296 CATTAGCCTTTAAAT TAAGAACCCA AAGCAA TGGGTTCTTA TCATATTGCTTGTTT TERM 122 80399 - 80415 + F 86 -6.5 -5.0925 | opp_overlap 80386 80399, overlap 80386 ATGGCGAGTAATTTA CGCCTGA TTT TTGGGCG TTTTTCGTTTTGGAA ybgC 80450 - 80848 + | Pol-Pal system-associated acyl-CoA thioesterase TERM 123 80841 - 80851 + F 72 -4 -4.91429 | TTAACGCTATAATCT CAAT GTA ATTG TTTTATTTGGAGTTT tolQ 80873 - 81553 + | colicin transport protein/biopolymer transport protein, membrane spanning protein in TolA-TolQ-TolR complex tolR 81619 - 82059 + | colicin uptake protein TolR, membrane spanning protein in TolA-TolQ-TolR complex tolA 82076 - 83377 + | cell envelope integrity inner membrane protein TolA tolB 83508 - 84683 + | dna-J like membrane chaperone, translocation protein TolB/colicin tolerance protein/periplasmic component of the Tol biopolymer transport system palA 84702 - 85163 + | 18K peptidoglycan-associated outer membrane lipoprotein, precursor PalA TERM 124 85152 - 85163 + F 70 -3 -5.1417 | opp_overlap 85160, overlap 85160 AACCGTCGTGCAGTG TTAG AGTA CTAA TTTTTAGTTTTCTAA TERM 125 85217 - 85190 - f 93 -12.8 -3.46106 | opp_overlap 85191, overlap 85181 85191 85195 CTAAAATGCCAAACA GTAAAGCCCCGA AAAT TCGGGGCTTTAT TTTTATGTGTAAATT TERM 126 85216 - 85191 - f 100 -16.3 -2.66941 | opp_overlap 85191, overlap 85190 85181 85195 TAAAATGCCAAACAG TAAAGCCCCGA AAAT TCGGGGCTTTA TTTTTATGTGTAAAT TERM 127 85191 - 85216 + F 100 -16.3 -5.04597 | opp_overlap 85190 85181 85191 85195 TAAAATGCCAAACAG TAAAGCCCCGA AAAT TCGGGGCTTTA TTTTTATGTGTAAAT TERM 128 85212 - 85195 - f 95 -12.7 -4.00934 | opp_overlap 85191, overlap 85191 85190 85181 ATGCCAAACAGTAAA GCCCCGA AAAT TCGGGGC TTTATTTTTATGTGT djlA 85309 - 86169 + | DNA-J like membrane chaperone protein yjdF 86169 - 86792 + | inner membrane protein dusC 86841 - 87761 + | tRNA-dihydrouridine synthase C HAPS_0079 87761 - 88807 + | hypothetical membrane protein TERM 129 89011 - 89027 + F 81 -8.1 -4.30719 | TACGATTTAGCTATA GTAACTT ATC AAGTTAC TTTCTTATGAAAAAA truA 89082 - 89870 + | tRNA pseudouridine synthase A TERM 130 90288 - 90272 - g 70 -9.5 -2.6162 | overlap 90271 90269 CAAGTGGTTAAAGAT CCTTTAG GTA CTAAAGG GGCAAGATTGACGAC cafA 89939 - 91414 + | ribonuclease G TERM 131 91474 - 91498 + F 88 -7.7 -4.86731 | opp_overlap 91474 91472, overlap 91477 91492 91496 TTGTTGCAAAATACA GGGGGGGGCTT AGA ATGCCCCCGTC TTTTATTTGAAAGAC TERM 132 91477 - 91495 + F 76 -10.2 -3.02684 | opp_overlap 91474 91472, overlap 91474 91492 TTGCAAAATACAGGG GGGGGCTT AGA ATGCCCCC GTCTTTTATTTGAAA potD 91573 - 92613 + | spermidine/putrescine-binding periplasmic protein 1 precursor TERM 133 92636 - 92655 + F 100 -12.2 -5.37043 | opp_overlap 92636 GACATCGCTTAAAAA CCTCAAGG CTTA CCTTGAGG TTTTTTGTATGAACT TERM 134 92655 - 92636 - f 100 -12.2 -4.59109 | opp_overlap 92636 GACATCGCTTAAAAA CCTCAAGG CTTA CCTTGAGG TTTTTTGTATGAACT HAPS_0083 92751 - 93329 + | hypothetical protein HAPS_0084 93355 - 93858 + | hypothetical protein HAPS_0085 93868 - 94593 + | ABC-type (unclassified) transport system, ATPase component ptsN 94730 - 95176 + | PTS system, nitrogen regulatory IIA-like protein HAPS_0087 95182 - 96027 + | predicted P-loop-containing kinase visC 96029 - 97210 + | FAD-dependent monooxygenase hlpB 97233 - 97817 + | lipoprotein HlpB, chromosome segregation ATPase cysS 97902 - 99281 + | cysteinyl-tRNA synthetase TERM 135 99330 - 99293 - T 86 -10.7 -3.75105 | gap 1, opp_overlap 99293 TTAATTGATTAACAA GCGGTGGGATTTGACGAA AAT TTTG-CAAATCCGACCGC TTTATAAATTAAATG TERM 136 99293 - 99330 + T 95 -12.9 -3.98083 | gap 1, opp_overlap 99293 TTAATTGATTAACAA GCGGTGGGATTTGACGAA AAT TTTG-CAAATCCGACCGC TTTATAAATTAAATG TERM 137 99658 - 99642 - T 79 -5.1 -5.08601 | GTACTCTAAGAAAAA GCCATCA ACA TGACAGC TTCCAAATAGTGTTT TERM 138 99960 - 99975 + T 71 -4.8 -4.66002 | ATCAGCAATATCATC TAATAG CTGG CTATTA TTATTTTTGTTGCTC TERM 139 100270 - 100299 + T 82 -12.3 -2.53911 | opp_overlap 100273, overlap 100270 TTAGAAAGACTTATA TAAGGGAGCTTAA TATT TTAAGCTCCCTAA TAGATTAAGGCTTCA TERM 140 100296 - 100273 - T 100 -14 -3.56251 | opp_overlap 100270 100270 GAAAGACTTATATAA GGGAGCTTAA TATT TTAAGCTCCC TAATAGATTAAGGCT hbpA 101899 - 100304 - | heme-binding protein A precursor TERM 141 100494 - 100516 + g 70 -3.3 -4.84527 | overlap 100495 100496 TCTTGAATTTGTACC GCTGAGGCG AGTAG CGCCTCAAA TTTTTCATCTGTCCA TERM 142 100496 - 100514 + g 72 -10.3 -2.69273 | overlap 100495 100494 TTGAATTTGTACCGC TGAGGCG AGTAG CGCCTCA AATTTTTCATCTGTC fhuF 103274 - 102486 - | ferric iron reductase involved in ferric hydroximate transport TERM 143 103311 - 103289 - R 79 -7.2 -4.36378 | opp_overlap 103289 TAAAAAGATAAATAA GTAAATCTAT TTT ATAAATTTAC ATTTCACTCGGATTT TERM 144 105004 - 105034 + r 72 -8.3 -3.64599 | opp_overlap 105006 105007, overlap 105006 105007 AATAATATCTAAATT AATTGGTGCGAGT GTCTA GCTCGCACCAGTA TTTACAGTGTAATAG TERM 145 105006 - 105032 + r 82 -10.9 -3.40112 | opp_overlap 105006 105007, overlap 105004 105007 TAATATCTAAATTAA TTGGTGCGAGT GTCTA GCTCGCACCAG TATTTACAGTGTAAT TERM 146 105007 - 105031 + r 83 -12.2 -2.63585 | opp_overlap 105006 105007, overlap 105006 105004 AATATCTAAATTAAT TGGTGCGAGT GTCTA GCTCGCACCA GTATTTACAGTGTAA TERM 147 105031 - 105007 - R 81 -11.5 -2.73439 | opp_overlap 105007 105006 105004, overlap 105006 AATATCTAAATTAAT TGGTGCGAG TGTCTAG CTCGCACCA GTATTTACAGTGTAA glgP 107498 - 105099 - | glucan phosphorylase TERM 148 107650 - 107619 - R 88 -13.3 -2.59748 | opp_overlap 107623, overlap 107623 CATGTTTAGAACGGA TAAATGGGATAGA TTTTTC TCTATCCCATTTA AGATAATTTAAACAT TERM 149 107623 - 107646 + r 84 -9.7 -3.65353 | opp_overlap 107619 107623 TTTAGAACGGATAAA TGGGATAGA TTTTTC TCTATCCCA TTTAAGATAATTTAA TERM 150 107646 - 107623 - R 85 -9.7 -4.00066 | opp_overlap 107623, overlap 107619 TTTAGAACGGATAAA TGGGATAGA TTTTTC TCTATCCCA TTTAAGATAATTTAA HAPS_0098 107822 - 107658 - | hypothetical protein dsbB 108370 - 107831 - | disulfide bond formation protein B (Disulfide oxidoreductase) TERM 151 110062 - 110076 + H 74 -4.3 -5.05782 | TTTTTATTATTTATT TGAAG TATTT CTTCA TTTTTTGAGATAAAT fadR 110094 - 110816 + | fatty acid metabolism regulator TERM 152 110933 - 110985 + F 91 -11.7 -4.12315 | opp_overlap 110937 110940 110947, overlap 110937 110940 110947 110983 TAGGGTATTAACAAT CCAATAATGGAAAATAGATAAGG AAATCGC CCTTGTCTATTTTCCATTATTAA TTTAATTATTCGTTT TERM 153 110981 - 110937 - f 100 -15.4 -3.30203 | opp_overlap 110933 110937 110940 110947, overlap 110940 110947 GTATTAACAATCCAA TAATGGAAAATAGATAAGGA AATCG CCCTTGTCTATTTTCCATTA TTAATTTAATTATTC TERM 154 110937 - 110981 + F 100 -16.9 -3.65261 | opp_overlap 110937 110940 110947, overlap 110933 110940 110947 GTATTAACAATCCAA TAATGGAAAATAGATAAGG AAATCGC CCTTGTCTATTTTCCATTA TTAATTTAATTATTC TERM 155 110978 - 110940 - f 95 -12.7 -3.77953 | opp_overlap 110937 110933 110940 110947, overlap 110937 110947 TTAACAATCCAATAA TGGAAAATAGATAAGGA AATCG CCCTTGTCTATTTTCCA TTATTAATTTAATTA TERM 156 110940 - 110978 + F 100 -14.2 -3.93148 | opp_overlap 110940 110937 110947, overlap 110937 110933 110947 TTAACAATCCAATAA TGGAAAATAGATAAGG AAATCGC CCTTGTCTATTTTCCA TTATTAATTTAATTA apbE 111012 - 112064 + | thiamine biosynthesis membrane-associated lipoprotein HAPS_0103 112076 - 112330 + | hypothetical protein TERM 157 112373 - 112386 + G 77 -8.1 -4.1585 | opp_overlap 112372 112382, overlap 112378 112382 GAGCAACAAGATATT CGCTG GAAA CAGCG TTTTGAAAATTATCA HAPS_0104 112355 - 112777 + | nucleotidyltransferase substrate binding protein HAPS_0105 112756 - 113076 + | DNA polymerase beta domain protein region trmU 113076 - 114227 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase dxs 116270 - 114423 - | 1-deoxy-D-xylulose-5-phosphate synthase suhB 117135 - 116323 - | inositol-1-monophosphatase (IMPase), putative mRNA turnover protein TERM 158 117243 - 117269 + H 76 -10.2 -3.08032 | overlap 117240 AATAAGATTTTATCT GGTGTTGTGTAG CAG CTGCACAACAGC TAATTTTAAGAAAAG TERM 159 118374 - 118345 - g 88 -11.5 -3.53761 | opp_overlap 118325 GAACCTGTTTTTAAA GCCTTTTACACCC GATT GGTTGCAAAAGGC AAAGCGAAGAAAGTC HAPS_0109 117532 - 118503 + | ISNme5, family IS110 mraZ 119050 - 119508 + | cell division protein MraZ, possible DNA-binding transcription factor TERM 160 119542 - 119528 - g 77 -6.4 -4.50661 | AACGGATAATCAAAA TGAGTG ACT CACCCA AACATATTACGGTGT mraW 119527 - 120465 + | S-adenosyl-methyltransferase MraW involved in cell envelope biogenesis ftsL 120465 - 120776 + | cell division protein FtsL ftsI 120779 - 122830 + | cell division protein FtsI/penicillin-binding protein 3 TERM 161 123047 - 123090 + G 83 -12.6 -2.79183 | overlap 123050 123088 GCGGACGATGACGTT CAAGCGGTGAGATTTGCAGA AAAA TTTGCAAATTCGACCGCTTG TGTACTGGAAGTACC TERM 162 123050 - 123087 + G 72 -8.5 -3.54653 | overlap 123047 GACGATGACGTTCAA GCGGTGAGATTTGCAGA AAAA TTTGCAAATTCGACCGC TTGTGTACTGGAAGT murE 122840 - 124330 + | UDP-N-acetylmuramyl-tripeptide synthetase TERM 163 124428 - 124404 - f 87 -11.5 -3.50422 | opp_overlap 124426, overlap 124406 AGCAATCATAAGGAA GAGGGGCTAAT GTA ATTAGCCCCTA CAAAAGTAGATTTTA TERM 164 124426 - 124406 - f 100 -14.1 -3.31854 | overlap 124404 CAATCATAAGGAAGA GGGGCTAAT GTA ATTAGCCCC TACAAAAGTAGATTT TERM 165 125735 - 125724 - g 81 -7.2 -4.54821 | opp_overlap 125723 125724 ACTTTAATGACAAAA CCGC AATG GCGG CGTTTTTGCTTCCGA murF 124475 - 125869 + | UDP-MurNAc-pentapeptide synthetase mraY 125880 - 126962 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 127085 - 128383 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 166 128553 - 128573 + G 76 -4.7 -5.1523 | ACACGAAGATCCCTT CTATTTTGC GGT GCGAGATGG TTTTTATGTTATCAC ftsW 128383 - 129561 + | cell division membrane protein murG 129576 - 130631 + | N-acetylglucosaminyl transferase involved with LPS TERM 167 130697 - 130685 - g 75 -2.7 -5.2204 | TATAAGGAATAAAAA TGAAA AAT TTCCA AGATAAAGTTAAAAA murC 130684 - 132111 + | UDP-N-acetylmuramate--L-alanine ligase ddl 132259 - 133170 + | D-alanine--D-alanine ligase ftsQ 133170 - 133949 + | cell division septal protein FtsQ ftsA 133976 - 135253 + | cell division protein FtsA/actin-like ATPase involved in cell division ftsZ 135296 - 136522 + | cell division protein FtsZ/Cell division GTPase lpxC 136548 - 137468 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 168 137603 - 137630 + F 100 -14.4 -5.7827 | TCGGCTAATCTCGCA GACTTCATTTAC CTTG GTAAATGAAGTC TTTTTTATTTGTCTT sstT 137658 - 138872 + | serine/threonine transporter SstT TERM 169 139000 - 138967 - f 76 -6.8 -4.38154 | opp_overlap 138958 138968 138969, overlap 138968 138969 138971 ATAGCTGCTATAAAA TTGACTATAGCCTT ATATTG AAGGCTATAGTCGT TTACTAGGTCTAGAT TERM 170 138968 - 138999 + F 95 -12.5 -3.78022 | opp_overlap 138967 138968 138969 138971, overlap 138958 138969 TAGCTGCTATAAAAT TGACTATAGCCTT ATATTG AAGGCTATAGTCG TTTACTAGGTCTAGA TERM 171 138999 - 138968 - f 79 -10.3 -3.2241 | opp_overlap 138958 138968 138969, overlap 138967 138969 138971 TAGCTGCTATAAAAT TGACTATAGCCTT ATATTG AAGGCTATAGTCG TTTACTAGGTCTAGA TERM 172 138969 - 138998 + F 100 -13.8 -2.86492 | opp_overlap 138968 138967 138969 138971, overlap 138958 138968 AGCTGCTATAAAATT GACTATAGCCTT ATATTG AAGGCTATAGTC GTTTACTAGGTCTAG TERM 173 138998 - 138969 - f 91 -13.8 -2.53125 | opp_overlap 138958 138969 138968, overlap 138968 138967 138971 AGCTGCTATAAAATT GACTATAGCCTT ATATTG AAGGCTATAGTC GTTTACTAGGTCTAG TERM 174 138996 - 138971 - f 77 -10.6 -2.80077 | opp_overlap 138958 138969 138968, overlap 138969 138968 138967 CTGCTATAAAATTGA CTATAGCCTT ATATTG AAGGCTATAG TCGTTTACTAGGTCT lepA 139145 - 140944 + | membrane GTP-binding protein LepA TERM 175 140987 - 140955 - f 75 -9.4 -3.11339 | gap 2, opp_overlap 140953, overlap 140951 140949 ATTAGTGAATAGATA TTGTA-G-GGACACAC TGA GTGTGTCCGCATACAA CATTCATATCTATTC TERM 176 141016 - 141046 + F 95 -13.4 -3.11559 | opp_overlap 141013 141014 141025, overlap 141018 141021 TCTATTGATAAATGT TGCAATGGACACAC TCA GTGTGTCCCTTGTA TATTAAAATTATAGT TERM 177 141018 - 141044 + F 100 -13.8 -3.11326 | opp_overlap 141013 141014 141025, overlap 141016 141021 TATTGATAAATGTTG CAATGGACACAC TCA GTGTGTCCCTTG TATATTAAAATTATA TERM 178 141021 - 141041 + F 84 -9.7 -3.6914 | opp_overlap 141013 141014 141025, overlap 141018 141016 TGATAAATGTTGCAA TGGACACAC TCA GTGTGTCCC TTGTATATTAAAATT TERM 179 142045 - 142016 - g 88 -11.5 -3.53761 | opp_overlap 141996 GAACCTGTTTTTAAA GCCTTTTACACCC GATT GGTTGCAAAAGGC AAAGCGAAGAAAGTC HAPS_0128 141203 - 142174 + | ISNme5, family IS110 lepB 142250 - 143212 + | signal peptidase I TERM 180 143302 - 143322 + F 100 -15.5 -3.01924 | CAAAATTCCCCCTAG CCCCCCTTT TTC AAAGGGGGG TATTCCACGAAGATA rnc 143345 - 144016 + | ribonuclease III/dsRNA-specific ribonuclease TERM 181 144307 - 144290 - g 72 -3.3 -5.12068 | overlap 144293 CACATTGAAGAAAAA CGAGCGA TTAA CCGCTTG ATGAACCGTGCGGCA TERM 182 144638 - 144648 + G 70 -5.4 -4.4009 | GATTATGTCACCGAC CGTT CGC AACG TTTTATGGCGTCAGA TERM 183 144905 - 144893 - g 74 -6.3 -4.32177 | CTATTTGATAATAAA GTTCA CCT TGAAC TGTGGGTGAAAGTCA era 144077 - 144979 + | GTP-binding protein Era binding 16S rRNA and 30S ribosome TERM 184 145136 - 145172 + G 70 -9.6 -2.62263 | AATCCGTTCTTCAAC CCTTTACCCCTTTATT GCTGA AATGGACGGGTAAAGG TGATCTCAAAACACT recO 144979 - 145698 + | recombinational DNA repair protein (RecF pathway) TERM 185 145791 - 145761 - T 93 -11.9 -3.72242 | gap 1, overlap 145762 CTAAATAAATTAGAA GGGTAGGTCGGGCA TTTA TGCCCGACAT-CCC GAAATATAGCACTAC TERM 186 145791 - 145762 - T 84 -12.1 -2.82261 | overlap 145761 TAAATAAATTAGAAG GGTAGGTCGGGCA TTTA TGCCCGACATCCC GAAATATAGCACTAC HAPS_0133 146330 - 145803 - | hypothetical protein TERM 187 146378 - 146399 + r 74 -10.1 -2.74286 | TAAAAGGGATGAGCT TGTCGGGCA TAAA TGCCCGACC TACTTGGAGATTCTT metX 147654 - 146581 - | homoserine O-acetyltransferase TERM 188 146630 - 146620 - G 72 -3.2 -5.0133 | CATCTCTTCAAAAAA CGGA TAA TCCA CTAAAAATGCATCGT TERM 189 147456 - 147415 - G 76 -2.4 -5.39721 | gap 1, overlap 147418 CGAGCAGATAAAAAA GTATTTATCGGTGTCAAAA GCTAA TCCTG-CACCGATAAAATC TTGCCACCAGCCTTT TERM 190 148716 - 148706 - H 76 -6.8 -4.45544 | overlap 148707 GCCCATCAATTAAAA TGCC GTT GGCA CTGCTCATAAACGGC pyrH 149526 - 150239 + | uridylate kinase TERM 191 150262 - 150289 + T 100 -8.6 -5.72254 | opp_overlap 150262 TATTCAACGAATTAA TCCAACTTAACT ATTT ATTTAAGTTGGA TTTTTTATTCTTTAC TERM 192 150289 - 150262 - T 73 -8.6 -3.46081 | opp_overlap 150262 TATTCAACGAATTAA TCCAACTTAACT ATTT ATTTAAGTTGGA TTTTTTATTCTTTAC gmhA 150879 - 150301 - | phosphoheptose isomerase frr 151009 - 151566 + | ribosome recycling factor TERM 193 151571 - 151601 + F 100 -14.2 -3.37796 | opp_overlap 151575, overlap 151575 TGGATTTTTAACATA TGAATTGGGCGGAA ATT TTCCGCTCAATTTA TTCTAACTGGTAGAA TERM 194 151575 - 151597 + F 95 -12.8 -4.33819 | opp_overlap 151575, overlap 151571 TTTTTAACATATGAA TTGGGCGGAA ATT TTCCGCTCAA TTTATTCTAACTGGT TERM 195 151597 - 151575 - f 80 -10.6 -3.37493 | opp_overlap 151571 151575 TTTTTAACATATGAA TTGGGCGGAA ATT TTCCGCTCAA TTTATTCTAACTGGT TERM 196 152399 - 152438 + G 85 -8.8 -4.41087 | gap 1, opp_overlap 152404, overlap 152404 TGATGGTAGTGTGAT G-AAAACGCCTATGAATAG ATT CTATTTGTAGGCGTTTGAC TTTCTATTTCATTCT TERM 197 152432 - 152404 - g 85 -8.9 -4.26076 | opp_overlap 152399 152404 GTAGTGTGATGAAAA CGCCTATGAATAG ATT CTATTTGTAGGCG TTTGACTTTCTATTT TERM 198 152404 - 152432 + G 100 -13.3 -3.93913 | opp_overlap 152404, overlap 152399 GTAGTGTGATGAAAA CGCCTATGAATAG ATT CTATTTGTAGGCG TTTGACTTTCTATTT HAPS_0139 151710 - 152429 + | hypothetical protein HAPS_0140 153788 - 152562 - | putative xanthine/uracil permease TERM 199 153959 - 153948 - R 76 -4.4 -5.08367 | AAGATAAACCAAAAA GCAA TCGT TTGC GCTGCCAGTGTTGAA perM 155085 - 154045 - | PerM protein, predicted permease usg 156147 - 155158 - | aspartate-semialdehyde dehydrogenase fxsA 156757 - 156290 - | FxsA protein affecting phage T7 exclusion by the F plasmid TERM 200 156738 - 156728 - G 79 -5.4 -4.89852 | GTAGATGTATAAAAA TAGC CCA GCTA AAAAGAGAAGTAATG TERM 201 156994 - 157023 + H 79 -10.7 -3.19192 | opp_overlap 156995 TTAGCCTTATTATTA ACCTCGTGGTGAT TATT ATCGCCGCGAGGG TTAAGTTGGCTCGCA TERM 202 157022 - 156995 - H 77 -9.8 -3.21416 | opp_overlap 156994 TAGCCTTATTATTAA CCTCGTGGTGAT TATT ATCGCCGCGAGG GTTAAGTTGGCTCGC TERM 203 157067 - 157088 + H 100 -10.9 -5.4833 | opp_overlap 157067 AATGAGATCCACAAA CCCTCGCTA GTTT TAGTGAGGG TTTTTTATTACATAA TERM 204 157088 - 157067 - H 80 -8.7 -3.96188 | opp_overlap 157067 AATGAGATCCACAAA CCCTCGCTA GTTT TAGTGAGGG TTTTTTATTACATAA ilvG 157300 - 158805 + | acetolactate synthase 2 large subunit, biosynthetic type ilvM 158817 - 159035 + | acetolactate synthase 2 regulatory subunit HAPS_0147 159763 - 159611 - | hypothetical protein TERM 205 159738 - 159777 + g 91 -10.2 -4.64766 | gap 1, opp_overlap 159740 159741 159742, overlap 159741 159742 AAATTTGTTGCTAAA AAGTGGCTTAAAGCCTTAT AGT ACAAGGCTTTAAGCC-CTC TTTTTGAAATATGAA TERM 206 159775 - 159740 - G 100 -15 -4.56775 | gap 1, opp_overlap 159738 159741 159742, overlap 159741 159742 ATTTGTTGCTAAAAA GTGGCTTAAAGCCTTAT AGT ACAAGGCTTTAAGCC-C TCTTTTTGAAATATG TERM 207 159741 - 159775 + g 100 -13 -3.93817 | opp_overlap 159740 159741 159742, overlap 159738 159742 TTTGTTGCTAAAAAG TGGCTTAAAGCCTTAT AGT ACAAGGCTTTAAGCCC TCTTTTTGAAATATG TERM 208 159775 - 159741 - G 100 -15.2 -3.33744 | opp_overlap 159741 159738 159742, overlap 159740 159742 TTTGTTGCTAAAAAG TGGCTTAAAGCCTTAT AGT ACAAGGCTTTAAGCCC TCTTTTTGAAATATG TERM 209 159742 - 159774 + g 100 -16.5 -2.95567 | opp_overlap 159740 159741 159742, overlap 159741 159738 TTGTTGCTAAAAAGT GGCTTAAAGCCTTAT AGT ACAAGGCTTTAAGCC CTCTTTTTGAAATAT TERM 210 159774 - 159742 - G 100 -18.7 -2.60032 | opp_overlap 159742 159741 159738, overlap 159740 159741 TTGTTGCTAAAAAGT GGCTTAAAGCCTTAT AGT ACAAGGCTTTAAGCC CTCTTTTTGAAATAT TERM 211 159866 - 159855 - H 85 -7.2 -4.90869 | opp_overlap 159857, overlap 159856 159857 ATGATTAAGCAAAAA GCCC CCGT GGGC GTTCCACGGGGTTAT TERM 212 159878 - 159856 - H 82 -10.5 -3.53437 | opp_overlap 159857, overlap 159855 159857 TGATTAAGCAAAAAG CCCCCGTGG GCGTT CCACGGGGT TATGAATGTGCTTTC TERM 213 159877 - 159857 - H 93 -14 -2.71339 | opp_overlap 159857, overlap 159855 159856 GATTAAGCAAAAAGC CCCCGTGG GCGTT CCACGGGG TTATGAATGTGCTTT TERM 214 159857 - 159877 + H 100 -14.7 -3.41414 | opp_overlap 159855 159857 159856 GATTAAGCAAAAAGC CCCCGTGGG CGT TCCACGGGG TTATGAATGTGCTTT TERM 215 163044 - 163065 + H 71 -4.5 -4.87626 | TTTCTGGAGCAGTTT GAATTTCAG AGCT TTGAGATTC TTTTTCCTCTTCAGC TERM 216 165808 - 165798 - g 73 -6.8 -4.24002 | GCCGAAAGCGTAAAA GCAG AAA CTGC AAAAAAAGGAAAAGA metG 164136 - 166190 + | methionyl-tRNA synthetase TERM 217 166198 - 166219 + F 70 -8.7 -3.10056 | overlap 166196 166200 TGAGATAAATTTACT CAGGGTGGG ATTT TTCACCCTG TCTTAACTCAATAAT ndk 166246 - 166662 + | nucleoside diphosphate kinase TERM 218 166696 - 166669 - T 71 -4.3 -4.87133 | opp_overlap 166669, overlap 166673 ATTGTGTAAATAAAA TGT-AGGCGCGAA TGAC TTCGC-CCTGACA TTCCTGTAATCATTT TERM 219 166994 - 167026 + T 95 -10.7 -4.564 | opp_overlap 166994 ATACAGCTATTCAAA GGACTGATTTCGATA TTG TATCGGACTTAGTCC TTTTCGTTTGGGGTT HAPS_0151 167926 - 167525 - | hypothetical protein nudE 168461 - 167913 - | ADP-ribose diphosphatase NudE HAPS_0153 168986 - 168510 - | predicted membrane protein focA 169171 - 169995 + | FNT family formate-nitrite transporter pflB 170089 - 172413 + | pyruvate-formate lyase TERM 220 172426 - 172476 + F 100 -23 -3.08867 | opp_overlap 172429 172432, overlap 172429 172432 TAATTTAGTTTAAGC TAATAAGCGGTCAGATTTTGCAAA ACT TTTGCAGAAACTGACCGCTTATTG TATCTTACGCATTAA TERM 221 172473 - 172429 - f 100 -20.3 -3.18274 | opp_overlap 172426 172429 172432, overlap 172432 TTTAGTTTAAGCTAA TAAGCGGTCAGATTTTGCAAA ACT TTTGCAGAAACTGACCGCTTA TTGTATCTTACGCAT TERM 222 172429 - 172473 + F 100 -22.5 -3.68292 | opp_overlap 172429 172432, overlap 172426 172432 TTTAGTTTAAGCTAA TAAGCGGTCAGATTTTGCAAA ACT TTTGCAGAAACTGACCGCTTA TTGTATCTTACGCAT TERM 223 172470 - 172432 - f 100 -17.6 -3.73336 | opp_overlap 172429 172426 172432, overlap 172429 AGTTTAAGCTAATAA GCGGTCAGATTTTGCAAA ACT TTTGCAGAAACTGACCGC TTATTGTATCTTACG TERM 224 172432 - 172470 + F 100 -19.8 -3.97043 | opp_overlap 172432 172429, overlap 172429 172426 AGTTTAAGCTAATAA GCGGTCAGATTTTGCAAA ACT TTTGCAGAAACTGACCGC TTATTGTATCTTACG TERM 225 172584 - 172619 + G 79 -3.3 -5.43329 | gap 1 ACGTTATCACTCTTA CGAATCTTGTGGCACA GTAGA TGGGCC-TGGGATTCG TTTTATTTTGTTTTT pflA 172555 - 173295 + | pyruvate formate lyase-activating enzyme 1 TERM 226 173396 - 173373 - T 71 -8.9 -3.18274 | CCCATTTCAACTTAA CGGTGATCG TCTAGG CGATCACCA AAATCAATCATAAAT TERM 227 173440 - 173452 + T 70 -5.5 -4.43576 | overlap 173436 GTTTCCAGTTCTGAA TCGGC ATT GTCGA TTTATTATATATGCT HAPS_0157 174258 - 173488 - | hypothetical protein TERM 228 174054 - 174067 + g 71 -5.2 -4.55826 | AAATTGCAAAATCAC GCCC TTCAAC GGGC TTTTGATATTTTAGA TERM 229 174464 - 174420 - R 74 -8.2 -3.64703 | gap 1, opp_overlap 174424 174428, overlap 174421 174424 TGCGTTTTATTGAAA TTGAGCAATCTAGTCTATTGA ACTG TCAATA-ACTAGATTGCTTAG TTACGATTAGCCAGC TERM 230 174463 - 174421 - R 82 -11.7 -2.78679 | gap 1, opp_overlap 174424 174428, overlap 174420 174424 GCGTTTTATTGAAAT TGAGCAATCTAGTCTATTGA ACTG TCAATA-ACTAGATTGCTTA GTTACGATTAGCCAG TERM 231 174424 - 174460 + r 95 -13.4 -3.37612 | gap 1, opp_overlap 174424 174421 174420, overlap 174428 TTTTATTGAAATTGA GCAATCTAGTCTATTGA ACTG TCAATA-ACTAGATTGC TTAGTTACGATTAGC TERM 232 174460 - 174424 - R 88 -13.4 -2.66272 | gap 1, opp_overlap 174424 174428, overlap 174421 174420 TTTTATTGAAATTGA GCAATCTAGTCTATTGA ACTG TCAATA-ACTAGATTGC TTAGTTACGATTAGC HAPS_0158 176129 - 174471 - | AAE family aspartate/alanine transporter TERM 233 175265 - 175277 + g 70 -5.5 -4.37886 | overlap 175250 CAGCACGTTCTGTGC GGTAC ATT GTGCC TTTTGTCGAAAGTGA TERM 234 175315 - 175339 + g 81 -5.7 -5.06414 | opp_overlap 175316 175319, overlap 175316 ACTTCTTCACCAAGA ATGAGTTGCAT TTT ATGCAACGCAG TTTTTGTTCCCACAA TERM 235 175316 - 175338 + g 76 -9.2 -3.63367 | opp_overlap 175316 175319, overlap 175315 CTTCTTCACCAAGAA TGAGTTGCAT TTT ATGCAACGCA GTTTTTGTTCCCACA TERM 236 175338 - 175316 - G 76 -9.2 -3.71848 | opp_overlap 175316 175315, overlap 175319 CTTCTTCACCAAGAA TGAGTTGCAT TTT ATGCAACGCA GTTTTTGTTCCCACA TERM 237 175335 - 175319 - G 72 -9.5 -2.96249 | opp_overlap 175316 175315, overlap 175316 CTTCACCAAGAATGA GTTGCAT TTT ATGCAAC GCAGTTTTTGTTCCC TERM 238 176166 - 176148 - H 70 -3.3 -4.9725 | opp_overlap 176162, overlap 176162 AGCCTCACATAAAAA TAAAATT GCTAT AATTTTA CCAAAATTTACATAT gltS 176317 - 177321 + | sodium/glutamate symport carrier protein TERM 239 177342 - 177365 + T 79 -8.2 -4.0044 | CATAGAAATCAGAGT GGTTGCTAAA ATTA TATAGCAACC TTTGTAGTCATGATT bioD 178177 - 177458 - | dithiobiotin synthetase HAPS_0161 178749 - 178357 - | hypothetical protein rplM 179043 - 179471 + | 50S ribosomal protein L13 rpsI 179487 - 179882 + | 30S ribosomal protein S9 TERM 240 179898 - 179921 + F 100 -12.6 -4.54449 | opp_overlap 179900 TATTACAATTTTATA TATCCTCTCT ATTA AGAGAGGATA TTTTCTATGGGCTCT TERM 241 179919 - 179900 - f 79 -10.8 -2.92653 | opp_overlap 179898 TTACAATTTTATATA TCCTCTCT ATTA AGAGAGGA TATTTTCTATGGGCT TERM 242 180630 - 180675 + F 87 -11.6 -3.46874 | opp_overlap 180645 180659, overlap 180631 180645 TAAAAATAATCTTTC TATTTTTTCTAAAAATGTGA TGAAAC TCACATTTTTAGAAAAAAGG TTATAAATCTTTATT TERM 243 180631 - 180674 + F 85 -12.9 -2.6704 | opp_overlap 180645 180659, overlap 180630 180645 AAAAATAATCTTTCT ATTTTTTCTAAAAATGTGA TGAAAC TCACATTTTTAGAAAAAAG GTTATAAATCTTTAT TERM 244 180936 - 180965 + F 70 -8.8 -3.06796 | opp_overlap 180964, overlap 180938 TGGCAGATATGGATC GGTTACTCTTAT ACCTTA ATAAGAGTAATC TTAGCTAAACTAAAA TERM 245 181937 - 181927 - g 70 -5.4 -4.40605 | ACTTACAAAGATAAA GCTT ACA AAGC AACAGCTCATCAATT ompP2 180997 - 182088 + | outer membrane protein P2 precursor (OMP P2) TERM 246 182130 - 182156 + T 100 -13.2 -4.49316 | opp_overlap 182130, overlap 182116 TTAGCTATGATTTAA GGGATAAGAGAT GTA ATTTCTTATCCC TTTATTATTAGTCAT TERM 247 182156 - 182130 - T 79 -11 -3.10164 | opp_overlap 182130 182116 TTAGCTATGATTTAA GGGATAAGAGAT GTA ATTTCTTATCCC TTTATTATTAGTCAT yfiF 182892 - 182164 - | tRNA/rRNA methyltransferase afuA 183018 - 184058 + | iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein hlyX 184995 - 184225 - | fumarate/nitrate reduction transcriptional regulator, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases HAPS_0168 185084 - 185191 + | hypothetical protein yecO 185360 - 185998 + | S-adenosyl-L-methionine-dependent methyltransferase TERM 248 186091 - 186101 + F 73 -5.4 -4.62168 | ATTTTTGGCAAATTC GGTA AAC TACC TTTTATCATTTCCCT TERM 249 186599 - 186610 + G 79 -5.8 -4.87626 | opp_overlap 186599 186598 AAGTATTAGATGAAG CGGA GAGA TCCG TTTTTCATATTGCAG dnaB 186133 - 187581 + | replicative DNA helicase TERM 250 187797 - 187773 - g 70 -2.9 -5.01732 | overlap 187775 AAGTTTTGCAAAAAA TCCAAAAAGAA GGG TTCTATTTGCA GATGCCTCCGCCCCC HAPS_0171 187583 - 187861 + | hypothetical protein TERM 251 188107 - 188089 - g 70 -3.1 -4.91109 | gap 1 CGTGCATTAGAAAAA CGCCCCGT CAGC ACGG-ACG ATGTTGAGCAAGCGA nrdR 187861 - 188310 + | transcriptional repressor NrdR, consists of a Zn-ribbon and ATP-cone domains HAPS_0173 189331 - 188318 - | lysine 2,3-aminomutase YodO family protein TERM 252 188524 - 188541 + g 73 -8.5 -3.62859 | AGCGAAATAATTTGT CACTCAA GGCT TTGAGTG TTTGAGCGTTGTCGT TERM 253 189124 - 189143 + g 80 -4.3 -5.25735 | gap 1, opp_overlap 189124 189126, overlap 189124 TCGCTTGTAAAAAAA GG-GGATC TGCCC GATCCTCC TTTTTCATTTTTTCG TERM 254 189142 - 189124 - G 86 -4.5 -5.40072 | opp_overlap 189124 189124, overlap 189126 TCGCTTGTAAAAAAA GGGGATC TGCCC GATCCTC CTTTTTCATTTTTTC HAPS_0174 189888 - 189355 - | hypothetical protein TERM 255 189740 - 189750 + g 73 -2.4 -5.31072 | opp_overlap 189739 189740 GGCGTATTATTAAAG TCCG CAT CGGC TTTTTGTTGTGTTGT TERM 256 189926 - 189914 - H 74 -4.1 -5.09895 | CATTGATTGAAAAAA CAGAT TAT ACCTG AAACGACTTTATCTG efp 190052 - 190618 + | elongation factor P TERM 257 190627 - 190649 + T 100 -12.8 -5.80817 | GAAATAATCTCGCAA TCCCCTGACA ATT TGTTAGGGGA TTTTTTTATCTTCAG zapB 190821 - 190642 - | putative cell division protein zapB TERM 258 191200 - 191184 - g 76 -2.3 -5.4756 | opp_overlap 191196 AACTTGAAGAAAAAA TTAAACA GGC TGTTGAA ACCATTCAATTACTT HAPS_0177 191147 - 191365 + | hypothetical protein TERM 259 191404 - 191382 - f 76 -7.8 -4.15044 | opp_overlap 191382, overlap 191359 CTTTGTTTGAATAAA CGGCTAAT ACTTTTG ATTAGCCG TTTTTTATTACTTCA TERM 260 191382 - 191404 + F 100 -7.8 -5.5604 | opp_overlap 191359 191382 CTTTGTTTGAATAAA CGGCTAAT ACTTTTG ATTAGCCG TTTTTTATTACTTCA tdk 191516 - 192004 + | thymidine kinase TERM 261 192339 - 192329 - g 76 -3.2 -5.26119 | TGGCGAAAAAGAAAA GAGC CGT ACTC AGTTAATAGAAGAGT yniC 192138 - 192785 + | 2-deoxyglucose-6-phosphatase TERM 262 192806 - 192828 + F 86 -9.8 -4.07885 | opp_overlap 192807, overlap 192807 TGATGTAAATCGTAA AGTCCCCCAT TGT ATGGGGGGCG TTTTGGGGAAAAATA TERM 263 192827 - 192807 - f 88 -11.1 -3.72363 | opp_overlap 192807 192806 GATGTAAATCGTAAA GTCCCCCAT TGT ATGGGGGGC GTTTTGGGGAAAAAT TERM 264 192807 - 192827 + F 93 -13.3 -3.04517 | opp_overlap 192807, overlap 192806 GATGTAAATCGTAAA GTCCCCCAT TGT ATGGGGGGC GTTTTGGGGAAAAAT TERM 265 192967 - 192979 + G 76 -9.1 -3.6393 | overlap 192966 TCCGCTCGTTTTAGT GGACG GTT CGTCC TATTTATATCGTGCA polA 192932 - 195796 + | DNA polymerase I yccA 196526 - 195864 - | integral membrane protein, transport protein TERM 266 196635 - 196618 - R 75 -5.5 -4.77775 | opp_overlap 196614 196618, overlap 196620 ATTTCACAAAACAAA GGGCGTA TCTC TACGCTC TTACTCTTTTACTGA clpB 199217 - 196644 - | ATP-dependant Clp protease chain B/ATPases with chaperone activity, ATP-binding subunit TERM 267 196887 - 196908 + g 74 -3.7 -5.06016 | TAGACGTTCAAGCTG TATTCTTGC AATC GCACGGATA TTTTCTTTATCTAAT TERM 268 198824 - 198840 + g 74 -5.1 -4.68424 | CGGCTGTCACCTTCT CTTTGGT TAA ACCTAAG TTTTTCAATAACTTG TERM 269 199475 - 199454 - R 77 -10.1 -3.2056 | ATTTACACTTAGGAA TTCCCGCCT CTTG AGGCGGGGA GGATGTCAGAACAAA dsbC 200203 - 199520 - | thiol:disulfide interchange protein DsbC precursor HAPS_0184 201708 - 200215 - | metalloprotease TERM 270 200389 - 200409 + g 93 -9.7 -5.07107 | overlap 200390 ACGCCCTGTATTTCC AGACAACGC AAT GCGTTGTCC TTTTTTAACACTTTG TERM 271 200390 - 200408 + g 95 -13.2 -3.6318 | overlap 200389 CGCCCTGTATTTCCA GACAACGC AAT GCGTTGTC CTTTTTTAACACTTT znuC 201984 - 202700 + | high-affinity zinc uptake system ATP-binding protein ZnuC znuB 202711 - 203496 + | high-affinity zinc uptake system membrane protein TERM 272 203549 - 203582 + F 100 -22.7 -5.44837 | opp_overlap 203549 CAAATTTCGCTTAAA TCCCACCGCTTGTTA ATGA TAACAAGCGGTGGGA TTTTTATATTTTTTT TERM 273 203582 - 203549 - f 100 -22.7 -3.54935 | opp_overlap 203549 CAAATTTCGCTTAAA TCCCACCGCTTGTTA ATGA TAACAAGCGGTGGGA TTTTTATATTTTTTT glmS 203620 - 204417 + | possible glutamine amidotransferase class-II TERM 274 204419 - 204457 + T 81 -6.9 -4.56607 | opp_overlap 204420 204424, overlap 204420 204424 ACCCTCACGTTTAAA ATAGATTGCCCCTTT CTATACTCA AAAGGGGCAATTTAC TTTTCTACTTAATCG TERM 275 204456 - 204420 - T 89 -10.3 -4.11216 | opp_overlap 204419 204420 204424, overlap 204424 CCCTCACGTTTAAAA TAGATTGCCCCTTTCTA TAC TCAAAAGGGGCAATTTA CTTTTCTACTTAATC TERM 276 204420 - 204456 + T 80 -10.4 -3.33241 | opp_overlap 204420 204424, overlap 204419 204424 CCCTCACGTTTAAAA TAGATTGCCCCTTT CTATACTCA AAAGGGGCAATTTA CTTTTCTACTTAATC TERM 277 204452 - 204424 - T 82 -11.1 -3.40622 | opp_overlap 204424 204420 204419, overlap 204420 CACGTTTAAAATAGA TTGCCCCTTTCTA TAC TCAAAAGGGGCAA TTTACTTTTCTACTT TERM 278 204424 - 204452 + T 83 -9 -4.29391 | opp_overlap 204420 204424, overlap 204420 204419 CACGTTTAAAATAGA TTGCCCCTTT CTATACTCA AAAGGGGCAA TTTACTTTTCTACTT lacD 205403 - 204462 - | tagatose 1,6-diphosphate aldolase TERM 279 205364 - 205376 + g 87 -6.3 -5.28481 | CAGCAATAATGCCCT CTTTG GTG CAAAG TTTTTTCATTAAATC ptsEIIA 205800 - 205414 - | PTS system, IIA component TERM 280 205912 - 205934 + r 77 -10.6 -2.77431 | overlap 205911 TTTAAATCCCCCTCA ATCCCCCTTT TTC AAAGGGGGAA GTTTGACGATATTTT bgaC 207751 - 205961 - | beta-galactosidase, glycosy hydrolase family protein TERM 281 207860 - 207881 + r 73 -10.1 -2.55015 | overlap 207857 207870 TTGACCGCTTGTTTT AGGACGCCA AGCG TGGCGTCCC TACATTCGATGGAAT TERM 282 207870 - 207912 + r 100 -14.3 -3.27994 | gap 1, opp_overlap 207896, overlap 207860 207857 207892 GTTTTAGGACGCCAA GCGTGGCGTCCCTAC-ATTC GATG GAATTGTAGGGACACGACGC TTCGTGTCCCGTTCA TERM 283 207928 - 207896 - R 76 -10 -3.07443 | gap 1, opp_overlap 207870 207892 CTACATTCGATGGAA TTGTA-GGGACACGA CGCT TCGTGTCCCGTTCAA ATTACCCTTTCGCCA ptsEIID 208766 - 207930 - | PTS system, IIDcomponent TERM 284 208546 - 208564 + g 82 -3.8 -5.37345 | overlap 208532 CTGGTGTTGAAGAAT TGGTTGTG CAT CACCATCA TTTTTTGTAGTTCAG ptsEIIC 209628 - 208753 - | PTS system, IIC component ptsEIIB 210115 - 209642 - | PTS system, IIB component agaS 211262 - 210132 - | tagatose-6-phosphate ketose/aldose isomerase TERM 285 210276 - 210266 - G 73 -6.8 -4.24123 | opp_overlap 210266 210261 CTAAGAACGGGAAAA TGCG TGC CGCA TCATCTAATTTGCAA agaR 212075 - 211314 - | transcriptional repressor AgaR/DNA-binding transcriptional dual regulator TERM 286 212170 - 212157 - H 75 -5.3 -4.855 | TAAAAACAAAAACAA TCGAA AATA TTCGA AAATGAGATAAAGAT TERM 287 212306 - 212331 + H 78 -9.9 -3.46117 | ATTGTTGTATTCGTG CTCAAAATGGT TACT ATCATTTTGAG TTATGGTGATATAAT rdgC 212416 - 213333 + | recombination associated protein dependent growth factor C TERM 288 213456 - 213488 + F 89 -10.8 -4.15884 | gap 1, opp_overlap 213447 213461, overlap 213461 CTTAAAGTATGACAC TCAAACCCGATCTTT TTTT GAAGATCGGG-TTGA TTATTCTTTAGTTGG TERM 289 213484 - 213461 - f 88 -11.1 -3.72968 | opp_overlap 213456 213461 AGTATGACACTCAAA CCCGATCTT TTTTTG AAGATCGGG TTGATTATTCTTTAG TERM 290 213461 - 213484 + F 91 -11.8 -3.65535 | opp_overlap 213461, overlap 213456 AGTATGACACTCAAA CCCGATCTTT TTTT GAAGATCGGG TTGATTATTCTTTAG TERM 291 214875 - 214889 + G 72 -3.6 -5.05782 | TTCTGTTTAACTTTG TACTAT ACG GTAGTA TTTTTTACGGTAGCT afuB 213587 - 215650 + | ABC-type Fe3+ transport system, permease component fbpC 215634 - 216689 + | ABC-type spermidine/putrescine transport systems, ATPase component TERM 292 216869 - 216894 + F 88 -7.7 -4.87592 | CAACCAGTTTTAAGG CTCATTGTTTT GGTT AAGACGATGAG TTTTGTTCTATCTAG TERM 293 216953 - 216976 + F 91 -6.8 -5.28176 | gap 1, overlap 216948 AACAAACCGCTTGAA GCCTCA-ACTG TTG TAGTTTGAGGC TTTTTTGTGGCTACA TERM 294 217015 - 217030 + F 100 -7.6 -5.77988 | opp_overlap 217015 217014 TTTGTTGTGTTAAAG GGACTT TTTC AAGTCC TTTTTTTATATCTGT TERM 295 217102 - 217120 + F 91 -11.8 -3.69354 | AGAGCTTGTCGCCGA TCCCATTG ATG CAATGGGA TTTGAACTTGTCGGC HAPS_0200 217115 - 217522 + | hypothetical protein TERM 296 218964 - 218978 + G 75 -10 -3.22924 | opp_overlap 218964, overlap 218962 218955 TACTACTCTTGAAGA CCTTGC AGA GCAAGG TGTTGATGATTTAGC TERM 297 218978 - 218964 - g 75 -10 -3.03441 | opp_overlap 218964 218962 218955 TACTACTCTTGAAGA CCTTGC AGA GCAAGG TGTTGATGATTTAGC nusA 217537 - 219069 + | transcription elongation factor NusA TERM 298 219322 - 219312 - g 85 -6.8 -5.09173 | GAAGAGGCTAAAAAA GCAG AAG CTGC CAAAGCCGAAGAAGC TERM 299 219805 - 219773 - g 77 -7.7 -4.30844 | ACGTGATGATGAAAA CGGCAGTAAAAATGA ACG TCAATCTGACCGCCG TAACCAAAAAGATAC TERM 300 221514 - 221532 + G 77 -9.6 -3.55761 | opp_overlap 221531, overlap 221493 GAGTTAGAATCTCTC CGTCGTTT CAA AGACGACG TTTCAGAAGTCCGTA infB 219087 - 221648 + | translation initiation factor 2 (IF-2; GTPase) TERM 301 221680 - 221662 - f 81 -11.8 -2.65112 | AATCTATTGATATTA GGGCAAAT GTC ATTTGCCC CTACAAATTTAACGG TERM 302 221690 - 221721 + F 100 -15.4 -5.64873 | opp_overlap 221688 221693 TTGCCCCTACAAATT TAACGGCATAATGA TTTC TCGTTATGCCGTTA TTTTTTATTCTTCCA TERM 303 221718 - 221693 - f 80 -10.5 -3.32997 | opp_overlap 221690, overlap 221688 CCCCTACAAATTTAA CGGCATAATGA TTTC TCGTTATGCCG TTATTTTTTATTCTT HAPS_0203 221788 - 222048 + | hypothetical protein HAPS_0204 222041 - 222418 + | putative phage associated protein TERM 304 222977 - 222956 - T 100 -15.9 -3.13164 | TTGTCAAGGATCTAA CTTCCCCCG CTTG CGGGGGAAG TGCCCGAGCGAAAGC TERM 305 223341 - 223325 - T 72 -3.7 -4.9445 | ACAAGTAACGAAAAA CCATATT TTC AAGATGG TGCTAGTGCATCGAC TERM 306 224088 - 224111 + T 80 -10.4 -3.35996 | opp_overlap 224091, overlap 224091 TAGGTAAGTCTGCGA CAACAGAAGG GGCA TCTTCTGTTG TTGTGGGTGCCCATA TERM 307 224445 - 224429 - T 78 -9.5 -3.55622 | opp_overlap 224424 GCTAACGGCTTTAAA TCAACAC AAA GTGTTGA TGGTAATAATATTGG TERM 308 225062 - 225078 + T 84 -12.3 -2.78463 | CCTGGTCCTATGGGT CCAGCAG GGG CTGCTGG TCTAGTAGGACCAAT TERM 309 225332 - 225375 + T 78 -10.8 -2.64616 | opp_overlap 225335 AAAGGCGATCCAGGA CAAGCGGGTCCAGCAGGACC ACGA GGTCCTGCGGGTCCACCTGG TCCTGTGGGTCCAGC TERM 310 225390 - 225335 - T 93 -13 -3.4252 | opp_overlap 225332 GGCGATCCAGGACAA GCGGGTCCAGCAGGACCACGAGGTCC TGCG GGTCCACCTGGTCCTGTGGGTCCAGC AGGGGCTGCTGGTCC TERM 311 225713 - 225696 - T 72 -7.7 -3.74347 | gap 1, overlap 225697 GTCAGAAAGGTGAAA CTGG-CCC TGC GGGTCCAG CGGGACCACAAGGCC TERM 312 225755 - 225725 - T 80 -10.5 -3.41051 | gap 1, overlap 225697 225752 CCAGCGGGACCACAA GGCCCTGCGAGTCC AACG GGA-TCACAAGGCC CTGCGGGTCCAACGG TERM 313 225783 - 225752 - T 100 -13.6 -3.42574 | overlap 225725 CCAACGGGATCACAA GGCCCTGCGGGTCC AACG GGTCCAGCAGGACC ACAAGGACCTACGGG TERM 314 225801 - 225788 - T 70 -8.1 -3.45023 | overlap 225791 CCAGCAGGACCACAA GGACC TACG GGTCC AACGGGGCCTGCGGG TERM 315 225882 - 225833 - T 100 -21.3 -3.42574 | overlap 225860 CCAACGGGACCACAA GGCCCTGCGGGTCCAGCAGGACC ACAA GGACCTGCGGGTCCAGCAGGACC ACAAGGCCCTGCGGG TERM 316 225882 - 225860 - T 73 -9 -3.45023 | overlap 225833 CCAGCAGGACCACAA GGACCTGCGG GTC CAGCAGGACC ACAAGGCCCTGCGGG TERM 317 227546 - 227589 + T 83 -9.1 -4.23207 | gap 1, opp_overlap 227540 227553, overlap 227548 227549 227553 CTGAGTAAATATTAA TAAT-AAAGGCTGCCTTCAA GTGTA TTGATGGCAGCCTTTGATTC TTTGTGTGGTTTTTA TERM 318 227548 - 227586 + T 90 -11.1 -4.19324 | opp_overlap 227540 227553, overlap 227546 227549 227553 GAGTAAATATTAATA ATAAAGGCTGCCTTCAA GTGTA TTGATGGCAGCCTTTGA TTCTTTGTGTGGTTT TERM 319 227549 - 227585 + T 100 -14.6 -3.09968 | opp_overlap 227540 227553, overlap 227548 227546 227553 AGTAAATATTAATAA TAAAGGCTGCCTTCAA GTGTA TTGATGGCAGCCTTTG ATTCTTTGTGTGGTT TERM 320 227553 - 227581 + T 100 -13.2 -4.18948 | opp_overlap 227553, overlap 227549 227548 227546 AATATTAATAATAAA GGCTGCCTTCAA GTGTA TTGATGGCAGCC TTTGATTCTTTGTGT TERM 321 227581 - 227553 - T 100 -13.2 -4.51224 | opp_overlap 227553 227549 227548 227546 AATATTAATAATAAA GGCTGCCTTCAA GTGTA TTGATGGCAGCC TTTGATTCTTTGTGT HAPS_0207 228519 - 227629 - | putative HTH-type transcriptional regulator TERM 322 229428 - 229416 - g 75 -2.7 -5.24449 | CATAAAGGCAAAAAA TTCTC AGT GAAAA ACCAAAAAGAAGCAG TERM 323 231117 - 231102 - g 81 -7.6 -4.56597 | CGTTTGCCTGAAAAA CTGCAA TACC TTGCAG ACGCACCACAACAAG topA 228657 - 231269 + | DNA topoisomerase I TERM 324 231272 - 231314 + T 75 -5.6 -4.89063 | opp_overlap 231275, overlap 231277 AAGACATAGATAAAG GTAGAGGGCTAAGTCTGGTG GAA TACGATACTTAGCCCTTTGA TTTATTTTTCAATAA TERM 325 231277 - 231309 + T 86 -9.9 -4.35747 | opp_overlap 231275, overlap 231272 ATAGATAAAGGTAGA GGGCTAAGTCTGGTG GAA TACGATACTTAGCCC TTTGATTTATTTTTC HAPS_0209 233052 - 231316 - | putative sulphatase TERM 326 232350 - 232368 + g 73 -5.9 -4.56775 | opp_overlap 232363 GCTGTTCTAATACTG CACGGTC GATAA GTCCGTG TTTTTCAAGGAAACT HAPS_0210 233278 - 233054 - | hypothetical protein kdkA 234183 - 233482 - | 3-deoxy-D-manno-octulosonic-acid kinase TERM 327 236309 - 236284 - g 89 -9.1 -4.74453 | opp_overlap 236284 236287 CAACAGACTGAAAAA GAAGTAGTGTC CGTT GAAACTACTTC TGAATTAGGCGAAAA thiI 235105 - 236556 + | thiamine biosynthesis protein ThiI/thiamine biosynthesis ATP pyrophosphatase glmU 236579 - 237940 + | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 328 237959 - 237981 + F 100 -10 -5.26918 | opp_overlap 237959 ATTGTACTAGGAAAA TCCTCTTTTG GTG TAAAAGAGGA TTTTTTATCAACTCT TERM 329 237981 - 237959 - f 86 -9.3 -4.30844 | opp_overlap 237959 ATTGTACTAGGAAAA TCCTCTTTT GGTGT AAAAGAGGA TTTTTTATCAACTCT rseB 238232 - 239197 + | periplasmic negative regulator of sigmaE TERM 330 239512 - 239546 + G 88 -4.2 -5.71983 | overlap 239516 AACCATGAATTATGG GTGGCTGCTGGAGTGT TGT GTACTACGGCAGTGAC TTTTTTTATGATTAA rseC 239194 - 239622 + | sigma-E factor regulatory protein TERM 331 240586 - 240603 + G 71 -4.2 -4.91712 | GTTACTGAATAATCC TCAACT GAAAGA AGTTGA TTTTTCTAACTTGAA lcfA 239633 - 241333 + | long-chain-fatty-acid--CoA ligase TERM 332 241371 - 241343 - f 86 -10.5 -3.8211 | opp_overlap 241340 241336 TTGTAGTGAGAATAA GTGGTATATCT GCGGTTG AGATATACCAC TAGTCATTATATTAA TERM 333 241590 - 241579 - g 75 -3 -5.22312 | ATCGACATTAAAAAA TCAA GAAA TTGA AATGGGGAAAGTCCT HAPS_0218 241442 - 242596 + | membrane-bound metallopeptidase HAPS_0219 242598 - 243443 + | hypothetical protein TERM 334 244432 - 244419 - g 76 -6.7 -4.37092 | opp_overlap 244428 AGTTTGGTTACAAAA TGCCT GTAA AGGCA CAGCCACTTCATTAC ompD15 243473 - 245206 + | surface antigen (D15), outer membrane protein HAPS_0221 245219 - 249124 + | putative tubulin binding protein TERM 335 249313 - 249342 + F 93 -12.3 -3.86524 | opp_overlap 249315 249321, overlap 249315 249321 TAAAGTGCGATATAA AACAAAAAGGCAC GGTA GTGCCTTTTTGTG TTTATAAAGGAATAT TERM 336 249340 - 249315 - f 100 -14.9 -4.53705 | opp_overlap 249313 249315 249321, overlap 249321 AAGTGCGATATAAAA CAAAAAGGCAC GGTA GTGCCTTTTTG TGTTTATAAAGGAAT TERM 337 249315 - 249340 + F 100 -14.9 -3.52113 | opp_overlap 249315 249321, overlap 249313 249321 AAGTGCGATATAAAA CAAAAAGGCAC GGTA GTGCCTTTTTG TGTTTATAAAGGAAT TERM 338 249321 - 249334 + F 100 -8.1 -5.24799 | opp_overlap 249321 249315, overlap 249315 249313 GATATAAAACAAAAA GGCAC GGTA GTGCC TTTTTGTGTTTATAA TERM 339 249334 - 249321 - f 100 -8.1 -5.58522 | opp_overlap 249315 249313 249321, overlap 249315 GATATAAAACAAAAA GGCAC GGTA GTGCC TTTTTGTGTTTATAA abiQ 249362 - 249898 + | AbiQ-like protein/lactococcal phage abortive infection protein TERM 340 249986 - 249976 - g 85 -6.8 -5.05301 | AAACAATTACAAAAA TGGC TAC GCCA ACAGCAAAAAATTGT TERM 341 250712 - 250738 + G 70 -8.7 -3.33899 | overlap 250710 250708 TATTAGAGTTTTTTA CCGCCATTTCT ATTGC GGTAATGGCGG TCTATTTCGGTTTTA TERM 342 251644 - 251655 + G 81 -5.8 -5.03145 | overlap 251641 AACTTTACCGAGCTT GCCT TACA AGGC TTTTTTGCAGAATTA cydD 249943 - 251685 + | cysteine/glutathione ABC transporter cydC 251689 - 253353 + | cysteine/glutathione ABC transporter mutT 253892 - 253476 - | mutator mutT protein, NTP pyrophosphohydrolase including oxidative damage repair enzymes TERM 343 253957 - 253912 - R 79 -6.9 -4.37092 | opp_overlap 253916 253928, overlap 253913 253916 ATTCCTTGTATAAAA CCAAGCGGTCAGAACTGTAAA ATAA TTTACTTGTCTGACCGCTTAT CAATTATGAATATTT TERM 344 253956 - 253913 - R 79 -10.4 -3.21934 | opp_overlap 253916 253928, overlap 253912 253916 TTCCTTGTATAAAAC CAAGCGGTCAGAACTGTAAA ATAA TTTACTTGTCTGACCGCTTA TCAATTATGAATATT TERM 345 253953 - 253916 - R 84 -9.9 -3.75115 | opp_overlap 253916 253928, overlap 253913 253912 CTTGTATAAAACCAA GCGGTCAGAACTGTAAA ATAA TTTACTTGTCTGACCGC TTATCAATTATGAAT TERM 346 253916 - 253953 + r 78 -9.9 -3.45321 | opp_overlap 253916 253913 253912, overlap 253928 CTTGTATAAAACCAA GCGGTCAGAACTGTAAA ATAA TTTACTTGTCTGACCGC TTATCAATTATGAAT secA 256645 - 253961 - | preprotein translocase subunit SecA TERM 347 255923 - 255942 + g 71 -6.6 -4.06148 | opp_overlap 255923 255912, overlap 255912 TAAATGCGGAATAAC TTTATCAA TCGC TTGATAAA TTTGTGTCGCATCTT HAPS_0227 257053 - 256733 - | hypothetical protein HAPS_0228 257159 - 257467 + | hypothetical protein nlpE 257485 - 257850 + | lipoprotein copper homeostasis and adhesion, NlpE folK 258418 - 257942 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 348 258349 - 258379 + g 72 -9 -3.41878 | opp_overlap 258352, overlap 258351 258352 AGGTTTGCAACGAAA CAACCGCTTGCTTA AGT TGAGCAAGCGGATC TTCTAAGTTAGAGCC TERM 349 258351 - 258377 + g 85 -11.6 -3.281 | opp_overlap 258352, overlap 258349 258352 GTTTGCAACGAAACA ACCGCTTGCTTA AGT TGAGCAAGCGGA TCTTCTAAGTTAGAG TERM 350 258352 - 258376 + g 95 -15.1 -2.56539 | opp_overlap 258352, overlap 258351 258349 TTTGCAACGAAACAA CCGCTTGCTTA AGT TGAGCAAGCGG ATCTTCTAAGTTAGA TERM 351 258376 - 258352 - G 100 -12.9 -4.0825 | opp_overlap 258351 258349 258352 TTTGCAACGAAACAA CCGCTTGCTTA AGT TGAGCAAGCGG ATCTTCTAAGTTAGA pcnB 259851 - 258418 - | polyA polymerase TERM 352 259409 - 259421 + g 85 -9.1 -4.21787 | opp_overlap 259407 TCTCGCAACAGCATT CCAGC TTC GCTGG TTTTCGACATTTTTT TERM 353 259975 - 259994 + r 74 -7.8 -3.91402 | opp_overlap 259970, overlap 259970 259976 TTATATAAAATTGTA GGGTGGGT CTTG ACCCACCG TTTCAATTTATATGC TERM 354 259976 - 259993 + r 79 -11.3 -2.94118 | opp_overlap 259970, overlap 259975 259970 TATATAAAATTGTAG GGTGGGT CTTG ACCCACC GTTTCAATTTATATG dksA 260488 - 260042 - | dosage-dependent DnaK suppressor protein TERM 355 260352 - 260362 + g 73 -6.8 -4.28049 | TCCTCCATAATTTGT GCGT GCC ACGC TTTTAAAATTTTGCG malQ 262729 - 260708 - | 4-alpha-glucanotransferase TERM 356 260962 - 260974 + g 72 -9.1 -3.33261 | TAACGCCTGCACTAT CCGCT TCT AGCGG TTGTACCGCTTCAAC TERM 357 262684 - 262672 - G 79 -9.1 -3.85817 | opp_overlap 262672 ACGGTTGGGCATAAA CACGG CGA CCGTG TTCATCCACGAAGTA TERM 358 262672 - 262684 + g 70 -9.1 -3.14344 | opp_overlap 262672 ACGGTTGGGCATAAA CACGG CGA CCGTG TTCATCCACGAAGTA TERM 359 262761 - 262782 + r 75 -10.1 -2.78154 | opp_overlap 262757, overlap 262758 262753 ATGGTAATTTATTTA CGGACGCCA AGCG TGGCGTCCC TACTTAAATATCTAC TERM 360 262809 - 262832 + r 89 -11 -3.84619 | opp_overlap 262805, overlap 262810 CTACGAAGTGATTGT AGGGACACGA CGCT TCGTGTCCCA TTATGTTTACCCTTT TERM 361 262810 - 262831 + r 100 -14.5 -2.89687 | opp_overlap 262805, overlap 262809 TACGAAGTGATTGTA GGGACACGA CGCT TCGTGTCCC ATTATGTTTACCCTT malG 263729 - 262839 - | ABC-type maltose transport systems, permease component TERM 362 262942 - 262928 - G 70 -5.6 -4.386 | GAATGGCGGATAAAA TCGCTG CCG CTGCGA AATCTCCCCATAGGT malF 265296 - 263740 - | ABC-type maltose transport systems, permease components TERM 363 264848 - 264874 + g 76 -2.3 -5.45802 | overlap 264849 TCGGCTAGTGCAAGC GGTGCAGAAAG GTAAG TTTTTTGCACA TTTTTATTTTCAAGG TERM 364 265479 - 265507 + r 100 -14.8 -3.05022 | opp_overlap 265487, overlap 265487 265497 265501 265503 GTTTGCCCTCTCTCT GCTCAAAATAGC CTTAA GCTATTTTGAGC TGTCTCTCTCCCGCA TERM 365 265503 - 265542 + r 78 -10 -3.37164 | overlap 265479 265501 265497 265511 AGCCTTAAGCTATTT TGAGCTGTCTCTCTCCCG CAAG CGGGAGAGAGTTACATCA TATTACTCTTTTTCA TERM 366 265511 - 265534 + r 100 -16.8 -3.137 | overlap 265503 265501 265497 GCTATTTTGAGCTGT CTCTCTCCCG CAAG CGGGAGAGAG TTACATCATATTACT malE 266801 - 265545 - | ABC-type maltose transporter periplasmic protein, substrate recognition for transport and chemotaxis TERM 367 267430 - 267406 - g 73 -10.1 -2.76737 | opp_overlap 267405, overlap 267405 GAGCAACGTGTAAAC CAAGTCGCAGA AAT TCTACAACTTG CTCACTTACTACAAC malK 267061 - 268200 + | ABC-type maltose transport systems, ATPase components TERM 368 268575 - 268564 - g 73 -5.8 -4.49337 | overlap 268555 268566 TCATAAGCTATAAAA CAGC AATC GCTG ATCGCAAGATCCACT hemN 268404 - 269555 + | oxygen-independent coproporphyrinogen III oxidase TERM 369 269563 - 269591 + T 93 -11.9 -3.86524 | opp_overlap 269565, overlap 269565 AGGAATAGAATGCAA AATCCCTCTTATT TAA AATAAGAGGGATC TTTATCAAAAAATAT TERM 370 269565 - 269589 + T 100 -14.5 -3.52113 | opp_overlap 269565, overlap 269563 GAATAGAATGCAAAA TCCCTCTTATT TAA AATAAGAGGGA TCTTTATCAAAAAAT TERM 371 269589 - 269565 - T 100 -14.5 -4.35874 | opp_overlap 269565 269563 GAATAGAATGCAAAA TCCCTCTTATT TAA AATAAGAGGGA TCTTTATCAAAAAAT TERM 372 269825 - 269869 + T 86 -6.7 -5.18561 | gap 1, opp_overlap 269832, overlap 269827 269832 AAATTTCATTTTTTA GA-GAAAAGGGCTTTAACTA TTCCAC TAGCTAAAGCCCTTTTAGTC TTTTTTACGTCTTTA TERM 373 269827 - 269866 + T 74 -9.5 -3.10444 | opp_overlap 269832, overlap 269825 269832 ATTTCATTTTTTAGA GAAAAGGGCTTTAACTA TTCCAC TAGCTAAAGCCCTTTTA GTCTTTTTTACGTCT TERM 374 269832 - 269861 + T 91 -9.4 -4.64361 | opp_overlap 269832, overlap 269827 269825 ATTTTTTAGAGAAAA GGGCTTTAACTA TTCCAC TAGCTAAAGCCC TTTTAGTCTTTTTTA TERM 375 269861 - 269832 - T 95 -11.6 -4.52857 | opp_overlap 269832 269827 269825 ATTTTTTAGAGAAAA GGGCTTTAACTA TTCCAC TAGCTAAAGCCC TTTTAGTCTTTTTTA TERM 376 269877 - 269890 + T 74 -3.8 -5.09895 | TTTTAGTCTTTTTTA CGTC TTTAGT GACG TTTTTTCAATCAATC HAPS_0240 270884 - 269961 - | hypothetical bacteriophage protein TERM 377 270123 - 270081 - G 82 -8.7 -4.29227 | gap 2 GTAAGTATCAACAAA TAAGCCGTCTTTACGTCTTAC AGT GTAAC-CGTAA-GACGGCTCA AAAACATTGCCTTTT TERM 378 270611 - 270641 + g 76 -7 -4.32402 | TGGCATCATTATCTT CACGATAATCAATA GGG TATTCAATATCGTG TTCTTTTAATTCCAC HAPS_0243 272088 - 271921 - | hypothetical protein TERM 379 272355 - 272368 + H 100 -8.1 -5.16237 | opp_overlap 272355 272354 ATGAAAGGGAAAATT GACCG CCTG CGGTC TTTTTTCATAACGTT TERM 380 272541 - 272530 - H 71 -7.2 -3.98236 | overlap 272531 AAACCTTACTACAAA GCGG ATAA CCGC ACCCGATAGATCAAG HAPS_0244 272745 - 273386 + | hypothetical protein TERM 381 273528 - 273539 + G 71 -7.2 -3.90291 | ACAAATTGACTGCGA CGGC GTAA GCCG TTTACTTAGAGCAAT HAPS_0245 273397 - 273618 + | hypothetical protein TERM 382 273634 - 273659 + F 86 -8.3 -4.38712 | opp_overlap 273633 273635, overlap 273635 ACTAACCGAAAACAG ACCGCACTTTA ATTT TGAAGTGCGGA TTTTCTACCAATAGG TERM 383 273635 - 273658 + F 84 -11.8 -3.22906 | opp_overlap 273635 273633, overlap 273634 CTAACCGAAAACAGA CCGCACTTTA ATTT TGAAGTGCGG ATTTTCTACCAATAG TERM 384 273658 - 273635 - f 76 -9.6 -3.44792 | opp_overlap 273634 273635, overlap 273633 CTAACCGAAAACAGA CCGCACTTTA ATTT TGAAGTGCGG ATTTTCTACCAATAG TERM 385 274407 - 274376 - g 93 -10.2 -5.13344 | ATATTAAGAGAAAAA GCAGGCTTGATAGC TTAT GGTATCAAGGCTGC AATAATAGCAAAACT HAPS_0246 273683 - 274651 + | hypothetical protein TERM 386 274706 - 274724 + F 78 -5.9 -4.82901 | overlap 274707 TCATAACATTCTCCT AGCCCGA TTTAT TCGGGCG TTTTTATAGGAGAAC TERM 387 274707 - 274723 + F 78 -9.4 -3.49419 | overlap 274706 CATAACATTCTCCTA GCCCGA TTTAT TCGGGC GTTTTTATAGGAGAA HAPS_0247 274744 - 275097 + | bacteriophage Mu GP27-like protein TERM 388 275170 - 275186 + T 73 -2.3 -5.4251 | ATATAATCCCATATT CAAGA CTAATTA TCTTG TTTTTTATGTATCAG HAPS_0248 275655 - 275191 - | hypothetical protein HAPS_0249 275756 - 275887 + | hypothetical protein lolA 275949 - 276578 + | outer-membrane lipoprotein carrier protein precursor TERM 389 276788 - 276810 + G 70 -8.4 -3.34895 | overlap 276787 GAACTTCGTTGGGAT TGCGAGTGCA AAT TGTACGCGCA TTGCTTGAAAATCAA trpR 276649 - 276960 + | tryptophan operon repressor TrpR mtgA 276944 - 277714 + | monofunctional biosynthetic peptidoglycan transglycosylase, membrane carboxypeptidase (penicillin-binding protein) TERM 390 277719 - 277739 + T 100 -10.5 -4.81212 | AAAAATTGTAGCTAT TAGCCTTGA CAT TCAGGGCTA TTTTGTTCTAATCCC HAPS_0253 278474 - 277737 - | ABC-type nitrate/sulfonate/bicarbonate transport permease HAPS_0254 279643 - 278477 - | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components protein TERM 391 279302 - 279279 - G 76 -8.9 -3.76373 | GGGCGAACAGTTAAA GCGGAACCA GCGAGA TGGTTCCAC ATCACGACTTTCACT HAPS_0255 280428 - 279652 - | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase TERM 392 280062 - 280086 + g 71 -6.4 -4.17109 | gap 1 CACTCAACGCTACAT CGGCTAG-AGC CTCT GCTACTCGCCG TTTAATTTCATTCTT HAPS_0256 280628 - 281695 + | acyl-CoA dehydrogenase mip 281742 - 282284 + | putative macrophage infectivity potentiator-related protein, peroxidase/antioxidase TERM 393 282427 - 282397 - g 73 -8.3 -3.6502 | gap 1, opp_overlap 282392 282392 282389 TATTCTCGATCCAAA CCGCTTCTTGCTAC AACT GCAGCAAGG-GCGG TTCGAGCTTTATTAT TERM 394 282493 - 282479 - g 76 -7.1 -4.30034 | overlap 282469 282468 AAAACTCGAGCAAAA CCCGA AAAAA TCGGG GAATATGCAGGTATC rimK 282305 - 283189 + | ribosomal protein S6 modification protein, glutamic acid ligase TERM 395 283204 - 283251 + F 73 -6.4 -4.33151 | opp_overlap 283209, overlap 283206 283209 ATTTAGTTAATAGCC TATAAGCGGTGAGAACTGTA ATAAATTG TACAAATCTCACCGCTTGTC TTTTCCATTCTGCTC TERM 396 283206 - 283249 + F 78 -9 -3.76167 | opp_overlap 283209, overlap 283204 283209 TTAGTTAATAGCCTA TAAGCGGTGAGAACTGTA ATAAATTG TACAAATCTCACCGCTTG TCTTTTCCATTCTGC TERM 397 283246 - 283209 - f 80 -10.7 -3.3676 | opp_overlap 283206 283204 283209 GTTAATAGCCTATAA GCGGTGAGAACTGTA ATAAATTG TACAAATCTCACCGC TTGTCTTTTCCATTC TERM 398 283209 - 283246 + F 77 -8.5 -3.99228 | opp_overlap 283209, overlap 283206 283204 GTTAATAGCCTATAA GCGGTGAGAACTGTA ATAAATTG TACAAATCTCACCGC TTGTCTTTTCCATTC mukF 283315 - 284646 + | chromosome partitioning protein MukF, condesin subunit F mukE 284693 - 285403 + | chromosome partitioning protein MukE, condesin subunit E hpaIIM 285423 - 286475 + | Type II modification methyltransferase HpaII/DNA (cytosine-5-)-methyltransferase TERM 399 286791 - 286781 - g 70 -5.4 -4.42748 | overlap 286778 TTAGTGCAAAAACAA CTCT TAG AGAG CGTTGGAAGCAAGCA HAPS_0262 286483 - 287082 + | hypothetical protein TERM 400 289594 - 289582 - g 79 -5.5 -4.8384 | GAAACAACGGAAAAA CACGC AGA ACGTG CCTTTGACGTGCAGA TERM 401 290642 - 290632 - g 73 -8.2 -3.86897 | TCGATTTCCGATAAA GCCC TTG GGGC GTTGCGAACCGCTGT TERM 402 290799 - 290789 - g 76 -6.8 -4.34947 | opp_overlap 290788 290789 AAGACATCATTAAAA CGGA CGA TCCG ATTGATGCGATTGAG mukB 287098 - 291588 + | chromosome partition protein MukB involved in cell division TERM 403 291627 - 291639 + T 74 -4.9 -4.75356 | overlap 291598 TGGAGAGTAGGGGAT TAAAG CTA CTTTA TTTTTAGCTATGTTT cca 292918 - 291647 - | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 404 292499 - 292475 - G 79 -10.7 -3.26449 | overlap 292487 TCCGAGAGAATGGAA GCGTGCGGC AAAGCGA GCCACACGC AACACCCGTAGCGGA frxA 293635 - 292967 - | NAD(P)H-flavin oxidoreductase dusA 293713 - 294006 + | tRNA-dihydrouridine synthase A TERM 405 294198 - 294163 - f 83 -7.1 -4.77165 | gap 1, opp_overlap 294163 TCGTTCATAATAAAA TACCTGTGTCTGA-AT GTATT ATCTCAGAAACAGGTA TTTACACAAATTGTG TERM 406 294875 - 294848 - f 78 -9.2 -3.61894 | opp_overlap 294847 294845 AACGTGTTCTAACAA TGCGTCAATTTC TGCA GAAACTGCCGCA GGGTTTTGTAATTTT HAPS_0267 295171 - 295335 + | hypothetical protein cdtC 295849 - 295319 - | cytolethal distending toxin protein C cdtB 296693 - 295860 - | cytolethal distending toxin protein B cdtA 297382 - 296702 - | cytolethal distending toxin protein A TERM 407 297453 - 297475 + r 86 -9.9 -4.10731 | opp_overlap 297453, overlap 297456 AGAAAATTTACAAAA TAAGTGGGC TATCC GCCCGCTTA TTTGCTTATCTTATT TERM 408 297475 - 297453 - R 84 -7.7 -4.5538 | opp_overlap 297453 297456 AGAAAATTTACAAAA TAAGTGGGC TATCC GCCCGCTTA TTTGCTTATCTTATT TERM 409 297456 - 297472 + r 73 -7.2 -4.14807 | opp_overlap 297453, overlap 297453 AAATTTACAAAATAA GTGGGC TATCC GCCCGC TTATTTGCTTATCTT glnS 299172 - 297490 - | glutaminyl-tRNA synthetase glpX 299369 - 300367 + | fructose 1,6-bisphosphatase II recJ 300525 - 302147 + | single-stranded-DNA-specific exonuclease RecJ TERM 410 302402 - 302381 - g 86 -7.3 -5.1523 | GGTACAACAGAAAAA CCGGTATTT CCAA AAATTCCGG AATCAAAATTTAATC plpD 302276 - 303121 + | lipoprotein Plp4/outer membrane protein and related peptidoglycan-associated (lipo)proteins TERM 411 303159 - 303183 + F 100 -6.4 -6.14618 | opp_overlap 303159 303154 CGTAGTAAAATAAAA GGGTCAATTC GTAAG GGAGTGACCC TTTTTTTGTTTTATA TERM 412 303183 - 303159 - f 76 -4.2 -5.13722 | opp_overlap 303159, overlap 303154 CGTAGTAAAATAAAA GGGTCAATTC GTAAG GGAGTGACCC TTTTTTTGTTTTATA HAPS_0276 303211 - 304029 + | cof protein, hydrolases of the HAD superfamily protein TERM 413 304166 - 304154 - g 86 -9.1 -4.34263 | opp_overlap 304153 304154 TTGCAACAAGAGAAA CACGC AAA GCGTG GTTTGAATTTCATCT HAPS_0277 304042 - 304560 + | sortase and related acyltransferases dapA 304672 - 305559 + | dihydrodipicolinate synthase TERM 414 305571 - 305594 + F 100 -11.8 -5.60993 | opp_overlap 305575 CTAAAATGTTCTAAG TCAAGGTTGG TTTT CCAGCCTTGA TTTTTTTGTAAAAAC lysS 305727 - 307178 + | lysyl-tRNA synthetase TERM 415 307318 - 307286 - f 74 -10 -2.6836 | gap 1, opp_overlap 307295, overlap 307282 AAATATTCAAAGTGA TTGTA-GGGACGCCA CGCT TGGCGTCCATTACAA AGACGAAGTGTGACT TERM 416 307363 - 307342 - f 70 -6.5 -4.0641 | opp_overlap 307342 307343, overlap 307344 TGTGACTTATATAAA TAGACGCCA AGCG TGGCGTCCC TACTTTTATAATAAT TERM 417 307361 - 307344 - f 84 -11.3 -3.6269 | opp_overlap 307343 307342, overlap 307342 TGACTTATATAAATA GACGCCA AGCG TGGCGTC CCTACTTTTATAATA TERM 418 307410 - 307378 - f 100 -14.9 -3.79906 | opp_overlap 307381, overlap 307379 CTACTTTTATAATAA TCCGTTGGGACACAC GCA GTGTGTCCCAACTGT GTTACCTGCCACATA TERM 419 307409 - 307379 - f 100 -18.4 -2.87622 | opp_overlap 307381, overlap 307378 TACTTTTATAATAAT CCGTTGGGACACAC GCA GTGTGTCCCAACTG TGTTACCTGCCACAT TERM 420 307381 - 307407 + F 100 -19.6 -3.10344 | opp_overlap 307379 307378 CTTTTATAATAATCC GTTGGGACACAC GCA GTGTGTCCCAAC TGTGTTACCTGCCAC HAPS_0280 307438 - 308211 + | hypothetical protein rpsB 308523 - 309248 + | 30S ribosomal protein S2 TERM 421 309292 - 309312 + F 100 -11.1 -5.80248 | opp_overlap 309295 ATTCAACATTGTGAA GCAGGGGCA ACA TACCCCTGC TTTTTTTATCTATTA tsf 309343 - 310194 + | elongation factor Ts TERM 422 310243 - 310213 - T 100 -12.8 -4.52589 | opp_overlap 310213 310206 310216 CTCTTTGAGATAAAA TAACATCCGCAT GTTTTGT ATGCGGATGTTA TTATGGGTTATTTAA TERM 423 310213 - 310243 + T 100 -14.2 -3.49938 | opp_overlap 310213, overlap 310206 310216 CTCTTTGAGATAAAA TAACATCCGCATGT TTT GTATGCGGATGTTA TTATGGGTTATTTAA TERM 424 310216 - 310240 + T 91 -11.5 -3.86481 | opp_overlap 310213, overlap 310213 310206 TTTGAGATAAAATAA CATCCGCATGT TTT GTATGCGGATG TTATTATGGGTTATT fdhD 310967 - 310251 - | formate dehydrogenase accessory protein TERM 425 310886 - 310871 - G 73 -7.6 -4.07568 | TTTTCTGTTTTAAAA TCCCTT CGGC AAGGGA AAAACCTAAGGCAAA fdxG_2 311614 - 312201 + | transcriptional formate dehydrogenase alpha major subunit/formate dehydrogenase, nitrate-inducible, major subunit fdxG_1 312250 - 314682 + | transcriptional formate dehydrogenase alpha major subunit/formate dehydrogenase, nitrate-inducible, major subunit TERM 426 314916 - 314893 - g 80 -11 -3.40403 | overlap 314894 CGGGGTCTATGACAA CCCTGCGGAT CTCA ATCCGCAGGC TTGGACGGTAATGCG TERM 427 314915 - 314894 - g 93 -14.5 -2.64099 | overlap 314893 GGGGTCTATGACAAC CCTGCGGAT CTCA ATCCGCAGG CTTGGACGGTAATGC fdxH 314684 - 315610 + | formate dehydrogenase iron-sulfur subunit, beta subunit/Fe-S-cluster-containing hydrogenase components 1 fdxI 315603 - 316271 + | formate dehydrogenase cytochrome B556 subunit, gamma subunit TERM 428 316298 - 316323 + F 100 -11.9 -5.93252 | ATGTAATTATTGTAT GCCGATCATCT AAAT AGTTGATCGGC TTTTTTCTTTTTAAA TERM 429 316445 - 316459 + F 89 -5.8 -5.3167 | AATGAAAACTTTATT CTTATT GAT AATAAG TTTTATTTATTTTTC TERM 430 316554 - 316570 + F 70 -6.6 -4.03234 | TTATTTGTTGCCACT TCCGTT TTTGC AACGGA TTTATCTAAAGAAAC TERM 431 317462 - 317482 + G 86 -10.4 -4.1021 | overlap 317468 317470 TTTTTGCCATATTTA CGCTCAGC CTAAC GCTGGGCG TTTGTGCTTATGCAA HAPS_0289 317398 - 317586 + | hypothetical protein TERM 432 317652 - 317671 + F 70 -3 -5.14477 | TATTTCAAATGAAAA TTTTTTAT TCAT ATGAAAAA TTTTTTAAATCTATC glgB 317851 - 320163 + | glycogen branching enzyme/1,4-alpha-glucan branching enzym TERM 433 320170 - 320186 + F 80 -10.9 -3.24329 | opp_overlap 320168, overlap 320168 GCAAAATAATGTAGG GACACAC TGC GTGTGTC TATTAATTACAAATC TERM 434 320282 - 320253 - f 72 -7.7 -3.79623 | opp_overlap 320254, overlap 320254 AAAAAGTTGATTAAA TTCCCTTCCCCCG TTTA CGGGGGAAGGTGC CGAAGGCGGAAGGGG TERM 435 320281 - 320254 - f 79 -11.2 -2.86689 | opp_overlap 320254, overlap 320253 AAAAGTTGATTAAAT TCCCTTCCCCCG TTTA CGGGGGAAGGTG CCGAAGGCGGAAGGG TERM 436 322117 - 322105 - g 70 -7.7 -3.68767 | ATACTGCAAAATTAA TTGCG ATT CGCAA ACAGATCCCCCTACT glgX 320433 - 322418 + | glycogen operon protein GlgX glgC 322449 - 323738 + | glucose-1-phosphate adenylyltransferase TERM 437 323771 - 323746 - f 73 -8.9 -3.41878 | overlap 323747 TTGCTTAATTTATAA TTCTTCCCCCG TTTA CGGGGGAAGTC CCACCAAAGGTGGGG TERM 438 323770 - 323747 - f 83 -12.4 -2.64912 | overlap 323746 TGCTTAATTTATAAT TCTTCCCCCG TTTA CGGGGGAAGT CCCACCAAAGGTGGG TERM 439 323828 - 323853 + F 82 -7.5 -4.50761 | opp_overlap 323827 323830, overlap 323829 323830 TTCGTTTCACTCAAC CACTTCCCCCA CAAG TGGGGGAAGAA TTTATTTAAATTGGT TERM 440 323829 - 323852 + F 82 -11 -3.29372 | opp_overlap 323827 323830, overlap 323828 323830 TCGTTTCACTCAACC ACTTCCCCCA CAAG TGGGGGAAGA ATTTATTTAAATTGG TERM 441 323830 - 323851 + F 93 -14.5 -2.569 | opp_overlap 323827 323830, overlap 323829 323828 CGTTTCACTCAACCA CTTCCCCCA CAAG TGGGGGAAG AATTTATTTAAATTG TERM 442 323851 - 323830 - f 95 -14.5 -2.75064 | opp_overlap 323830 323829 323828, overlap 323827 CGTTTCACTCAACCA CTTCCCCCA CAAG TGGGGGAAG AATTTATTTAAATTG TERM 443 324333 - 324323 - g 71 -6.8 -4.13767 | GTGCTTATCTCAAAA GCTG GAA CAGC CCTGTTAAAAGTGTC glgA 323878 - 325311 + | glycogen synthase TERM 444 325342 - 325316 - f 76 -8 -4.16284 | opp_overlap 325320 325339 325339, overlap 325318 325320 AGATTGTCTAACAAA GATAGATGGGCT AAT AGCCCATCTTTT TGGCAAAAAATTTAA TERM 445 325340 - 325318 - f 86 -10.6 -3.67877 | opp_overlap 325320 325339 325339, overlap 325316 325320 ATTGTCTAACAAAGA TAGATGGGCT AAT AGCCCATCTT TTTGGCAAAAAATTT TERM 446 325320 - 325338 + F 100 -13.2 -4.56775 | opp_overlap 325318 325316 325320 TGTCTAACAAAGATA GATGGGCT AAT AGCCCATC TTTTTGGCAAAAAAT TERM 447 325338 - 325320 - f 95 -13.2 -3.41738 | opp_overlap 325320, overlap 325318 325316 TGTCTAACAAAGATA GATGGGCT AAT AGCCCATC TTTTTGGCAAAAAAT guaB 325463 - 326926 + | inositol-5-monophosphate dehydrogenase TERM 448 327108 - 327084 - f 71 -5.1 -4.58563 | overlap 327088 327100 TAATCAGAAAAATAA CAAATAAAATC AAC GATTTTTTTCG CAAAAAACACAACGC TERM 449 327346 - 327332 - g 71 -4.2 -4.96468 | GAAATTCAAAGAAAA TACCCC GTT GGGCTA CTAGGCGATATTCAC HAPS_0295 327191 - 327694 + | exopolysaccharide biosynthesis protein TERM 450 327910 - 327890 - g 82 -11.2 -3.10677 | opp_overlap 327883 AAGGAAGGTAGTGAA CTGTCCGA AAAAA TCGGACAG TTGAAAATGCTATCA HAPS_0296 327710 - 328390 + | putative ATPase involved in DNA repair, putative prophage antirepressor guaA 328462 - 330033 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 451 330154 - 330121 - T 85 -12 -3.03124 | opp_overlap 330127, overlap 330127 GTTTATCCCTTAATA TCAAAATACCGTCA TTAATT TGACGGTATTTTAA AATAGGGGGAAGAAT TERM 452 330148 - 330127 - T 90 -8.8 -4.4261 | opp_overlap 330127, overlap 330121 CCCTTAATATCAAAA TACCGTCA TTAATT TGACGGTA TTTTAAAATAGGGGG TERM 453 330127 - 330148 + T 81 -8.8 -4.13767 | opp_overlap 330121 330127 CCCTTAATATCAAAA TACCGTCA TTAATT TGACGGTA TTTTAAAATAGGGGG TERM 454 330705 - 330682 - T 71 -8.9 -3.18274 | CCCATTTCAACTTAA CGGTGATCG TCTAGG CGATCACCA AAATCAATCATAAAT TERM 455 331153 - 331118 - T 83 -7.1 -4.77165 | gap 1, opp_overlap 331118 TCGTTCATAATAAAA TACCTGTGTCTGA-AT GTATT ATCTCAGAAACAGGTA TTTACACAAATTGTG TERM 456 331201 - 331185 - T 78 -9.5 -3.54129 | opp_overlap 331174 331176 331185 331199, overlap 331199 GAGAGGCTCTTTAAA GCCTTAT ACT ATAAGGC TTTGAGCCAGTTTTT TERM 457 331185 - 331201 + T 78 -9.5 -3.5771 | opp_overlap 331185 331199, overlap 331174 331176 331199 GAGAGGCTCTTTAAA GCCTTAT ACT ATAAGGC TTTGAGCCAGTTTTT HAPS_0300 331452 - 331234 - | hypothetical protein HAPS_0301 332158 - 331901 - | hypothetical protein TERM 458 332066 - 332049 - G 89 -9.9 -4.25104 | overlap 332034 GTTTGTTCATCAAAA TGATGGC AAAC GCCATCA CCACGATCTAAATAA HAPS_0302 333801 - 332155 - | ATPase involved in DNA repair, putative transmembrane protein TERM 459 332890 - 332905 + g 70 -2.6 -5.10163 | overlap 332885 AATTTTTTCTAAAAA CTTTAT AATC GTAAAG TTTTGTTTTAGACTT TERM 460 333214 - 333233 + g 73 -5.8 -4.63107 | gap 1, overlap 333214 333216 TCTTTTATGTCTTTC TT-CAGGAG TAT CTCCTGTAA TTTTACTTATTTGAT TERM 461 333216 - 333230 + g 75 -10 -3.22965 | overlap 333214 333214 TTTTATGTCTTTCTT CAGGAG TAT CTCCTG TAATTTTACTTATTT TERM 462 333838 - 333821 - R 100 -11.3 -4.83615 | CACTCCCTATAAAAA GGCGAGA TTCC TCTCGCC TAGCATAATTTACTC dmcA 334924 - 333848 - | methyl-accepting chemotaxis protein TERM 463 334275 - 334288 + g 73 -2.4 -5.252 | TGTGTACGATAATCT CTTG CTGATT CAAG TTTTTTCTCCGAATG HAPS_0304 335326 - 334940 - | hypothetical protein HAPS_0305 336066 - 335353 - | hypothetical protein TERM 464 335745 - 335756 + g 72 -4.4 -4.68209 | opp_overlap 335745 AATGTTTTTCAATAA GTTC GGTT GAAC TTTCTTTATTGAAAT TERM 465 335766 - 335780 + g 70 -2.9 -5.01732 | TTGAACTTTCTTTAT TGAAA TTTAC TTTCA TTTTTTCACAAACTT HAPS_0306 336567 - 336277 - | hypothetical protein HAPS_0307 336967 - 336629 - | hypothetical protein HAPS_0308 337863 - 336976 - | transcriptional regulator-like protein, helix-turn-helix domain-containing protein HAPS_0309 338081 - 338425 + | XRE family transcriptional regulator TERM 466 338457 - 338438 - T 100 -8.6 -5.36965 | opp_overlap 338438 TAACAGGATAAAAAA TAAGGTGG CAAG CCACCCTA TTAAATGATTACTTA xthA 339269 - 338466 - | exonuclease III TERM 467 339348 - 339379 + r 86 -13 -2.90078 | opp_overlap 339348, overlap 339348 CAAATTAAAACAAAA TCCCCCCCCCCTTT GAAA AAAAGGGGGGAGGA ATTTCCTATAAAATC TERM 468 339348 - 339380 + r 93 -12 -3.83998 | opp_overlap 339348, overlap 339348 CAAATTAAAACAAAA TCCCCCCCCCCTTT GAAAA AAAGGGGGGAGGAA TTTCCTATAAAATCA TERM 469 339379 - 339348 - R 100 -17.4 -5.22258 | opp_overlap 339348 339348 CAAATTAAAACAAAA TCCCCCCCCCCTTT GAAA AAAAGGGGGGAGGA ATTTCCTATAAAATC yojA 340761 - 339385 - | GntP family gluconate/proton (H+) symporter TERM 470 340856 - 340824 - R 95 -7 -5.39721 | overlap 340827 CTACGAGATAAAAAA GAACCCCTTCGAAA TCATC TTCCGAAGGGGTGG AAATTGGTTTTTAGA TERM 471 340853 - 340827 - R 100 -13.1 -4.77122 | overlap 340824 CGAGATAAAAAAGAA CCCCTTCGAAA TCATC TTCCGAAGGGG TGGAAATTGGTTTTT mesJ 341956 - 341069 - | predicted ATPase of the PP-loop superfamily implicated in cell cycle control TERM 472 342121 - 342100 - RH 74 -10.1 -2.7185 | opp_overlap 342099 342100 AGTATTTCTGAAGTA GGTCGGGCA TTTA TGCCCGACA ATTATTACAATCCAT TERM 473 342100 - 342121 + rH 75 -10.1 -2.78992 | opp_overlap 342100, overlap 342099 AGTATTTCTGAAGTA GGTCGGGCA TTTA TGCCCGACA ATTATTACAATCCAT HAPS_0314 342216 - 342082 - | hypothetical protein TERM 474 342186 - 342165 - GH 71 -6.5 -4.15143 | overlap 342166 AACCAATTACATAAA CGTCGGGCA TAAA TGCCCAACC TACAAGGAAAAATAT TERM 475 342185 - 342166 - GH 76 -10 -3.08002 | overlap 342165 ACCAATTACATAAAC GTCGGGCA TAAA TGCCCAAC CTACAAGGAAAAATA TERM 476 342389 - 342348 - gRH 77 -8.1 -3.92324 | gap 1, opp_overlap 342385, overlap 342352 CTCGCCAATATGAAA CCAACATCAGCGAAGAACAG CTA CTATCCCTTGCCGATG-TGG TTCACCCTATCCACA TERM 477 342386 - 342352 - gRH 75 -8.6 -3.61589 | opp_overlap 342385, overlap 342348 CCAATATGAAACCAA CATCAGCGAAGAACAG CTA CTATCCCTTGCCGATG TGGTTCACCCTATCC ubiX 342200 - 342766 + | aromatic acid decarboxylase TERM 478 342824 - 342814 - TfRH 73 -5.4 -4.60041 | ATTTATCTTGAAAAA TCAC GTT GTGA GCCTTGCGTGCCATC HAPS_0316 342914 - 342801 - | hypothetical protein HAPS_0315 342899 - 343204 + | hypothetical protein TERM 479 345728 - 345718 - g 71 -6.8 -4.0044 | AACCACTATCAGAAA CACG AGG CGTG GACGTGGGAAAGTCA glnE 343366 - 346224 + | glutamate-ammonia-ligase adenylyltransferase queF 346241 - 347080 + | NADPH-dependent 7-cyano-7-deazaguanine reductase lrp 347193 - 347675 + | leucine-responsive transcriptional regulator ftsK 347685 - 350288 + | DNA translocase FtsK involved in cell division, DNA segregation ATPase FtsK TERM 480 350924 - 350906 - g 73 -10.4 -2.8237 | opp_overlap 350909, overlap 350898 350909 AGAACAACCGAATCA CAAGTTCA CCG TGAACTTG CATCTGGCTTATCTT aroG 350372 - 351463 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 481 351556 - 351578 + G 85 -9.2 -4.20516 | opp_overlap 351554 TTAGCACTAGATACT GCCACTGA AGCCTGC TCAGTGGC TTTGTTACATCAAGG HAPS_0322 351472 - 352218 + | putative M22-like peptidase HAPS_0323 352226 - 352954 + | hypothetical protein TERM 482 353034 - 353072 + T 78 -4 -5.28942 | overlap 353035 353036 GCATAGTAGACAAGT TTGTTGCTAATGTTTG TTTTCTT TAAACATTAGCAACCC TTTTTATTTGGCATA TERM 483 353035 - 353071 + T 72 -7.5 -3.76281 | overlap 353034 353036 CATAGTAGACAAGTT TGTTGCTAATGTTTG TTTTCTT TAAACATTAGCAACC CTTTTTATTTGGCAT TERM 484 353036 - 353070 + T 79 -11 -2.84684 | overlap 353035 353034 ATAGTAGACAAGTTT GTTGCTAATGTTTG TTTTCTT TAAACATTAGCAAC CCTTTTTATTTGGCA cdtC 353737 - 353207 - | cytolethal distending toxin protein C cdtB 354581 - 353748 - | cytolethal distending toxin protein B cdtA 355270 - 354590 - | cytolethal distending toxin protein A tgt 356547 - 355390 - | queuine tRNA-ribosyltransferase TERM 485 356501 - 356521 + g 76 -2.4 -5.36018 | opp_overlap 356500, overlap 356510 CGAGAAAAAGTTAAT CGACCACG ACGAG CGTTGCCG TTTGTTTTTTTTAGT TERM 486 356510 - 356525 + g 90 -3.2 -5.96521 | opp_overlap 356500, overlap 356501 GTTAATCGACCACGA CGAGCG TTGC CGTTTG TTTTTTTTAGTTCGT TERM 487 356607 - 356584 - R 90 -10.4 -4.35042 | opp_overlap 356602, overlap 356581 CTGAGTAGAAAAGAA TAAGGCGAAT AGAT ATTCGCCCTA CAAAATAATTTAGTG gyrB 359059 - 356627 - | DNA gyrase subunit B yajC 359314 - 359826 + | preprotein translocase subunit YajC sirA 359826 - 360056 + | SirA protein/redox protein, regulator of disulfide bond formation TERM 488 360044 - 360077 + T 95 -10.5 -4.49906 | opp_overlap 360045 360047, overlap 360047 TTTATTCATCTATAA AGATAAGGCATAGTA GTAA TACTATGCCTTATTG TTTATTTAACTGTTG TERM 489 360076 - 360045 - T 91 -11.8 -3.92869 | opp_overlap 360044 360047, overlap 360047 TTATTCATCTATAAA GATAAGGCATAGTA GTAA TACTATGCCTTATT GTTTATTTAACTGTT TERM 490 360074 - 360047 - T 100 -14.4 -3.55378 | opp_overlap 360044 360047, overlap 360045 ATTCATCTATAAAGA TAAGGCATAGTA GTAA TACTATGCCTTA TTGTTTATTTAACTG TERM 491 360047 - 360074 + T 100 -14.4 -4.34285 | opp_overlap 360047 360045, overlap 360044 ATTCATCTATAAAGA TAAGGCATAGTA GTAA TACTATGCCTTA TTGTTTATTTAACTG HAPS_0331 360423 - 360079 - | hypothetical protein HAPS_0332 360972 - 360439 - | hypothetical protein pmbA 361101 - 362450 + | antibiotic maturation factor PmbA TERM 492 362503 - 362534 + T 91 -10.2 -4.38369 | opp_overlap 362486 362505, overlap 362500 CATAAACTTTTTATA CAGTAGGAAGACCA AGTG TGGCGTTCCTACTG TTCTTTCTTTGGTTC TERM 493 362532 - 362505 - T 73 -9.2 -2.89055 | opp_overlap 362503 362500 TAAACTTTTTATACA GTAGGAAGACCA AGTG TGGCGTTCCTAC TGTTCTTTCTTTGGT TERM 494 363406 - 363394 - T 76 -7.7 -4.12902 | TAATTATTCGTAAAA GCTGA TTC TCAGC AGAGACAGGCATAGT TERM 495 363443 - 363414 - T 100 -18.1 -3.02471 | opp_overlap 363423 TTCTCAGCAGAGACA GGCATAGTAGACA AACT TGTCTACTATGCC CCACAAAATGGTGTA leuD 364122 - 363517 - | isopropylmalate isomerase small subunit leuC 365540 - 364134 - | isopropylmalate isomerase large subunit, dehydratase component TERM 496 365625 - 365645 + H 80 -9.7 -3.61774 | opp_overlap 365621 365633, overlap 365621 365626 365633 TGGAACATAAACGTG GGGACACAC TGC GTGTGTCCG TTTACCGATGTTATG TERM 497 365626 - 365644 + H 90 -13.2 -2.76583 | opp_overlap 365621 365633, overlap 365621 365625 365633 GGAACATAAACGTGG GGACACAC TGC GTGTGTCC GTTTACCGATGTTAT TERM 498 365633 - 365673 + H 84 -11.9 -2.92091 | opp_overlap 365633 365669, overlap 365621 365626 365625 365652 365657 AAACGTGGGGACACA CTGCGTGTGTCCGTTTACC GAT GTTATGTGGACACACGTAG TGTGTCCCTACATCT TERM 499 365787 - 365766 - H 71 -4.5 -4.83677 | opp_overlap 365766, overlap 365761 AAAACAAAAGTAAAA TGCTATTTT TGGG AAAATTGCA TTTTTTTATTCTGTG TERM 500 365766 - 365787 + H 91 -4.5 -5.9218 | opp_overlap 365766 365761 AAAACAAAAGTAAAA TGCTATTTT TGGG AAAATTGCA TTTTTTTATTCTGTG HAPS_0337 365847 - 365963 + | hypothetical protein proP 367153 - 365957 - | bicyclomycin/multidrug efflux system TERM 501 366127 - 366141 + g 73 -7.8 -3.92075 | opp_overlap 366093 TACCAGCTACGGCAT TGGCGG TAC CTGCCA TTTGTGGATAGCGAT rsuA 367846 - 367154 - | ribosomal small subunit pseudouridine synthase A TERM 502 367403 - 367393 - G 81 -6.8 -4.69053 | opp_overlap 367392 CACCACGCAATAAAA TGCC TTC GGCA AATTGTGTGGCATAA cpxA 369305 - 367929 - | two-component sensor protein/signal transduction histidine kinase TERM 503 367971 - 367981 + g 80 -4.6 -5.34555 | TTTGACGCGTAATCC GCCT AAT GGGC TTTTTTCTGCTCTAA TERM 504 368842 - 368864 + g 79 -4.8 -5.15634 | opp_overlap 368843, overlap 368843 TCAAATAATGTATTA ATGAGCTCTC GTT GAGGGTTCAC TTTTTTAGTGAAATA TERM 505 368843 - 368863 + g 73 -8.3 -3.68658 | opp_overlap 368843, overlap 368842 CAAATAATGTATTAA TGAGCTCTC GTT GAGGGTTCA CTTTTTTAGTGAAAT TERM 506 369358 - 369331 - R 79 -4.8 -5.07275 | overlap 369325 TTATAGATAGAAAAA TCCCCCAACCAT ATAA AAAGCTGAGGGA TTTTACTTTATGATG cpxR 370100 - 369375 - | transcriptional regulatory protein CpxR/response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain mazG 370976 - 370200 - | nucleoside triphosphate pyrophosphohydrolase TERM 507 371108 - 371087 - H 75 -10.1 -2.81462 | overlap 371084 371082 ACAAAAGATATAGTA GGGACGCCA CGCT TGGCGTCCA ATATCAATATAATTT TERM 508 371168 - 371140 - H 72 -9.5 -2.58491 | overlap 371139 371137 TACAAATATCAATAT CGTAGGGACACAC TGA GTGTGTCCGCCCG TAAAGTAAGGTTAAA TERM 509 371210 - 371189 - H 70 -6.5 -4.08317 | opp_overlap 371204, overlap 371191 TAAGGTTAAATGAAA CAGACGCCA AGCG TGGCGTCCC TACGGACACTTTAAT TERM 510 371208 - 371191 - H 84 -11.3 -3.62756 | opp_overlap 371204, overlap 371189 AGGTTAAATGAAACA GACGCCA AGCG TGGCGTC CCTACGGACACTTTA pepP 371451 - 372776 + | Xaa-Pro aminopeptidase phd 372840 - 373103 + | prevent-host-death family protein, antitoxin of a toxin/antitoxin system, phd-like protein pilT 373100 - 373507 + | pilT domain-containing protein serC 373572 - 374654 + | phosphoserine aminotransferase TERM 511 374708 - 374652 - T 71 -4.6 -4.7878 | gap 1, opp_overlap 374660, overlap 374669 GAGGCAGAAAATAAA TAATCTGAC-CTATTGAACGGACGCCA AGCG TGGCGTCCCTACAATAACGTTGAATTA GGGATATTCGAAAAA TERM 512 374690 - 374669 - T 76 -10.1 -3.07935 | opp_overlap 374660, overlap 374652 ATCTGACCTATTGAA CGGACGCCA AGCG TGGCGTCCC TACAATAACGTTGAA HAPS_0347 375746 - 374775 - | ISNme5, family IS110 TERM 513 374904 - 374933 + g 88 -11.5 -3.53761 | opp_overlap 374932 GACTTTCTTCGCTTT GCCTTTTGCAACC AATC GGGTGTAAAAGGC TTTAAAAACAGGTTC TERM 514 375929 - 375908 - H 78 -8.7 -3.6914 | overlap 375909 AATTTTAATATACAA GGGACACGA CGCA TCGTGTCCA AATAGCAAAGTGTAA TERM 515 375928 - 375909 - H 84 -12.2 -2.80761 | overlap 375908 ATTTTAATATACAAG GGACACGA CGCA TCGTGTCC AAATAGCAAAGTGTA hsdM 375987 - 377675 + | Type I restriction-modification system methyltransferase subunit hsdS 377668 - 379032 + | Type I restriction-modification system, S subunit/Type I restriction modification DNA specificity domain-containing protein TERM 516 379797 - 379769 - f 70 -8.8 -2.94597 | overlap 379768 AATCTTCAATGAAAT CTGCCCCCCTCT TTAGC AAAGAGGGGCTG GGGGAGATTTGGCAG hsdR 379862 - 383026 + | Type I site-specific restriction-modification system, R (restriction) subunit and related helicases TERM 517 383922 - 383933 + G 72 -3.6 -5.00884 | CGTAATGAAATGCAA CGCT ATGA GGCG TTTTTTAAGGCAAAT hisC 383061 - 384155 + | histidinol-phosphate aminotransferase TERM 518 384193 - 384223 + F 100 -14.2 -3.86897 | opp_overlap 384198, overlap 384198 GGCGTACCACTTAAA AAAAATAGGCTTCC GAT GGAAGCCTATTTTA TTTGTAAGAAATGGG TERM 519 384218 - 384198 - f 100 -14.1 -5.82316 | opp_overlap 384193 384198 ACCACTTAAAAAAAA TAGGCTTCC GAT GGAAGCCTA TTTTATTTGTAAGAA TERM 520 384198 - 384218 + F 100 -14.1 -4.99043 | opp_overlap 384198, overlap 384193 ACCACTTAAAAAAAA TAGGCTTCC GAT GGAAGCCTA TTTTATTTGTAAGAA TERM 521 384534 - 384521 - g 74 -5.3 -4.67904 | GAGCAAGTCGAAAAA GCATT TCCA AATGC GATTGTTCGAGTTCG TERM 522 384638 - 384605 - g 70 -5.4 -4.323 | gap 1 GGCAAAGAGGGAAAA CAAAAAGTAGCCACC TTTTT GG-AGCAACTTTTTG AAGAAGGATCAGCCT HAPS_0352 384422 - 384682 + | hypothetical protein TERM 523 385086 - 385056 - T 78 -9.2 -3.5771 | opp_overlap 385048 385079 385084, overlap 385048 385047 385084 AAAAATGGGCTTAAA GCCTTATCATTCAA GGT TTAAACAATAAGGC GAGATATTCTCTCGC TERM 524 385102 - 385084 - T 89 -10.3 -4.08958 | opp_overlap 385079 385084, overlap 385056 AGGTTTAAACAATAA GGCGAGA TATTC TCTCGCC TTGCCTTATCTTTTT TERM 525 385084 - 385102 + T 80 -10.3 -3.33845 | opp_overlap 385056 385084, overlap 385079 AGGTTTAAACAATAA GGCGAGA TATTC TCTCGCC TTGCCTTATCTTTTT asnC 386529 - 385126 - | asparaginyl-tRNA synthetase irp 389136 - 386743 - | iron-regulated outer membrane protein/TonB-dependent receptor TERM 526 389170 - 389154 - H 71 -5.2 -4.58395 | overlap 389165 CCTATCCTTTAAAAA CCATAA AAAAA TTATGG AATAATGTAACAAAA TERM 527 389175 - 389165 - H 81 -2.6 -5.77632 | overlap 389154 AAAACCATAAAAAAA TTAT GGA ATAA TGTAACAAAAATATA ppx 389322 - 390821 + | exopolyphosphatase, Ppx/GppA phosphatase TERM 528 392634 - 392667 + G 75 -9.6 -3.43338 | overlap 392635 TGCTGGTATGTTAGC CGCTTCTTGGGCAC AATATC GTGCGCAAGAAGCA TTAGTTAATCTGAGT TERM 529 392635 - 392666 + G 90 -13.1 -2.65521 | overlap 392634 GCTGGTATGTTAGCC GCTTCTTGGGCAC AATATC GTGCGCAAGAAGC ATTAGTTAATCTGAG ppc 390982 - 393621 + | phosphoenolpyruvate carboxylase TERM 530 393641 - 393668 + F 100 -12.9 -5.17054 | opp_overlap 393644 GTATATTCTGGATTA CAACCTCTTAG TGAATT CTAAGAGGTTG TTTTTTAGATATTAT TERM 531 393665 - 393644 - f 73 -8.8 -3.4072 | opp_overlap 393641 TATTCTGGATTACAA CCTCTTAG TGAATT CTAAGAGG TTGTTTTTTAGATAT TERM 532 393959 - 393982 + G 84 -8.2 -4.68593 | GTGGGCGGTGCGTTT CAGTGGCAAA ATGG TTTGTCGCTG TTTTTAGGTAATGCA TERM 533 394438 - 394462 + G 79 -9.9 -3.69841 | overlap 394436 TCCGCAAAAATATTT GGTTGAGGGCG ATG CGTCCTCTGCC TCTTATTTCTTAGCC aroA 393869 - 395026 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 534 395176 - 395154 - T 100 -15 -4.21319 | opp_overlap 395151 395147 ATTAAGGGTAACAAA TTAGGGGCTA AAG TAGCCCCTAA GAAATTATTCAGTAA cspD 395390 - 395181 - | cold shock-like protein CspD TERM 535 395938 - 395926 - g 83 -3.5 -5.63517 | opp_overlap 395926 TGGGGAAAGAAAAAA TTTTT AGG AAAAA GTTATGATGGGGTTC bcp 395596 - 396075 + | thioredoxin-dependent thiol peroxidase TERM 536 396393 - 396373 - g 71 -3.9 -4.98255 | opp_overlap 396388 TGCTAATTATAAAAA GGCTTGTGA TTG TCGTAAGCC AAAAGCTGGTTTATT gmhB 396065 - 396634 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 537 396872 - 396882 + G 71 -6.8 -3.96469 | opp_overlap 396871 396872 CCAACATAAAAATAG CCAG AGT CTGG TTGTTGTTGGACTGT hpt 396768 - 397307 + | hypoxanthine-guanine phosphoribosyltransferase TERM 538 397333 - 397359 + F 76 -5 -5.05505 | opp_overlap 397333 TTTCAATTAAATTAA CCGCTTGTTGAT ATA AACTTCAAGCGG TTTTTAATTTCTAAT slt 397400 - 399475 + | putative soluble lytic murein transglycosylase TERM 539 400037 - 399999 - g 95 -14 -3.48924 | opp_overlap 399999 GCAGTTCTCAGACAA GCGGTCAGTTTCTGCAAA AAA TTTGCAAAATCCAACCGC TTATATTAAAGAGCT HAPS_0364 399565 - 400107 + | ATPase components of ABC transporters with duplicated ATPase domains-containing protein fieF 400107 - 400994 + | cation-efflux pump FieF, predicted Co/Zn/Cd cation transporter TERM 540 401031 - 400990 - T 82 -7.5 -4.38503 | gap 1, opp_overlap 400997 401012 401014, overlap 401012 TCAAACAAGAAAGAA GATAATTTGTAGGGGCAAAT TAC ATTTGCCCC-AGATATTACC GATGATTTTGGGGCT HAPS_0366 402152 - 401166 - | ISCro4, family IS110 TERM 541 401374 - 401386 + g 71 -4.8 -4.62069 | AGTGCCTTACGAATG TCGG ATTGC CCGA TTTTTGAAATACCAA TERM 542 402296 - 402323 + H 100 -10.7 -5.08255 | opp_overlap 402296 CTACTTTCTCTATAA CCCCATTATGA AGGTAC TCGTAATGGGG TTTTCTTTTGCCCAT TERM 543 402323 - 402296 - H 76 -9.2 -3.29144 | opp_overlap 402296 CTACTTTCTCTATAA CCCCATTATGAA GGTA CTCGTAATGGGG TTTTCTTTTGCCCAT TERM 544 402371 - 402351 - H 100 -14.1 -3.68325 | opp_overlap 402348 402364 402367 CATATTCTAATACAA GGGGCAAAT TAC ATTTGCCCC AGATATTACCGATGA TERM 545 402564 - 402536 - H 80 -10.4 -3.41569 | opp_overlap 402535 402534 402533, overlap 402534 TCAGCTACGTAAATA TCTCAGCCCT TTTGAACCG AGGGCTGAGA GTAATTTGTTGTCTG menC 402604 - 403590 + | O-succinylbenzoate synthase TERM 546 404114 - 404098 - T 72 -3.7 -4.9445 | ACAAGTAACGAAAAA CCATATT TTC AAGATGG TGCTAGTGCATCGAC TERM 547 405667 - 405641 - T 75 -8.6 -3.54129 | overlap 405642 GAGATCGTGGCGAAA CTGGCCCTGCGG GTC CAGCAGGTCCAA TGGGTCCTAGGGGTG TERM 548 405666 - 405642 - T 74 -9.9 -2.72263 | overlap 405641 AGATCGTGGCGAAAC TGGCCCTGCGG GTC CAGCAGGTCCA ATGGGTCCTAGGGGT TERM 549 405722 - 405694 - T 78 -10.1 -3.4252 | GGTGAGCGAGGAGAA GCTGGCCCTGCGG GTG CAGCTGGTCCAGC AGGGGCTAGGGGTGA TERM 550 405800 - 405760 - T 70 -8.1 -3.29144 | CCAGTGGGTCCAGAA GGACCGCGAGGACCTGCGG GTC CAACCGGTGCTCAAGGTCC AGCAGGGCCTAGGGG TERM 551 406115 - 406084 - T 76 -9.2 -3.44991 | overlap 406082 CAGAAAGGTGAAACA GGCCCTGCGGGTCC AGTA GGTCCAGCTGGACC ACAAGGTGTACCTGG TERM 552 406232 - 406219 - T 70 -8.1 -3.45023 | CCAGCAGGACCACAA GGACC GCAG GGTCC AGCAGGACCACAAGG TERM 553 406259 - 406246 - T 70 -8.1 -3.45023 | overlap 406249 CCAGCAGGACCACAA GGACC TACG GGTCC AACGGGGCCTGCTGG TERM 554 407869 - 407912 + T 83 -9.1 -4.23207 | gap 1, opp_overlap 407863 407876, overlap 407871 407872 407876 CTGAGTAAATATTAA TAAT-AAAGGCTGCCTTCAA GTGTA TTGATGGCAGCCTTTGATTC TTTGTGTGATTTTTA TERM 555 407871 - 407909 + T 90 -11.1 -4.19324 | opp_overlap 407863 407876, overlap 407869 407872 407876 GAGTAAATATTAATA ATAAAGGCTGCCTTCAA GTGTA TTGATGGCAGCCTTTGA TTCTTTGTGTGATTT TERM 556 407872 - 407908 + T 100 -14.6 -3.09968 | opp_overlap 407863 407876, overlap 407871 407869 407876 AGTAAATATTAATAA TAAAGGCTGCCTTCAA GTGTA TTGATGGCAGCCTTTG ATTCTTTGTGTGATT TERM 557 407904 - 407876 - T 100 -13.2 -4.51224 | opp_overlap 407872 407871 407869 407876 AATATTAATAATAAA GGCTGCCTTCAA GTGTA TTGATGGCAGCC TTTGATTCTTTGTGT TERM 558 407876 - 407904 + T 100 -13.2 -4.18948 | opp_overlap 407876, overlap 407872 407871 407869 AATATTAATAATAAA GGCTGCCTTCAA GTGTA TTGATGGCAGCC TTTGATTCTTTGTGT HAPS_0370 408552 - 408169 - | hypothetical protein uvrA 411465 - 408637 - | excinuclease ABC subunit A TERM 559 409665 - 409676 + g 73 -2.2 -5.26875 | GTGGGGTACGCTGTT TCGG GATC TCGA TTTTTTCCTTACCAG TERM 560 410646 - 410630 - G 77 -9.4 -3.49924 | opp_overlap 410627, overlap 410621 CCCAAACCATCACAA GCTGGG CAAGC CCCAGC AGGATTATTAAACGA TERM 561 411681 - 411648 - H 95 -13.3 -3.34344 | gap 1, opp_overlap 411640, overlap 411651 TTATTTTTGAACTAA TGAGGTAGGGACACAC TGC GTGTGTCCCTA-CGCA AAACTACATTTAACC TERM 562 411679 - 411651 - H 100 -16.1 -2.84098 | opp_overlap 411640, overlap 411648 TTTTTGAACTAATGA GGTAGGGACACAC TGC GTGTGTCCCTACG CAAAACTACATTTAA ssb 411724 - 412242 + | single-strand DNA-binding protein TERM 563 412282 - 412264 - f 80 -8.8 -3.90358 | opp_overlap 412265, overlap 412265 ATATTAGAGATGAAA GCCCAGCA GTT TGCTGGGT TTTTTATTATAGCTA TERM 564 412281 - 412265 - f 85 -12.3 -2.93492 | opp_overlap 412265, overlap 412264 TATTAGAGATGAAAG CCCAGCA GTT TGCTGGG TTTTTTATTATAGCT TERM 565 412265 - 412281 + F 100 -12.3 -5.56673 | opp_overlap 412264 412265 TATTAGAGATGAAAG CCCAGCA GTT TGCTGGG TTTTTTATTATAGCT TERM 566 412755 - 412771 + G 72 -4.3 -4.67982 | AATTACAGGTTTTGA GCAAGCG TTG CGTTCGC TTTTGTTAGATGACG TERM 567 413173 - 413150 - g 89 -5.4 -5.40072 | TTTCCGCCAAAAAAA TCTCTGATTT TTTA AAATCACAGA AAATTACTACTTCAA HAPS_0373 412450 - 413664 + | ATPase, predicted ATPase (AAA+ superfamily) rhlB 415274 - 414054 - | ATP-dependent RNA helicase RhlB higA 415610 - 415338 - | plasmid maintenance system antidote protein, XRE family/addiction module antidote protein, HigA family/PSEEN1946 proteic killer active protein higB 415899 - 415621 - | plasmid maintenance system killer/proteic killer protein, RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system TERM 568 417023 - 417010 - g 71 -5.3 -4.56607 | TGATGAAGCAGAAAA TCGTA TGCA TACGA TTAAAGCGGTGATGG arg 416048 - 417058 + | ornithine carbamoyltransferase TERM 569 417108 - 417133 + F 80 -8.9 -3.95073 | overlap 417109 ATCCGCCCTTCGGGC ACCTTCCCCCG CAAG CGGGGGAAGAA TTTATGGCTGTGCAA TERM 570 417109 - 417132 + F 85 -12.4 -2.96722 | overlap 417108 TCCGCCCTTCGGGCA CCTTCCCCCG CAAG CGGGGGAAGA ATTTATGGCTGTGCA glyA 417405 - 418667 + | serine hydroxymethyltransferase TERM 571 418691 - 418740 + F 91 -9.7 -4.42806 | gap 1 AATAGATTTGTTGTG TTATCCTCTTGTCATTATTTGT TTTAGTT ACAA-TATTGACAAGGGGATAA TTTATTTGAGGATAA TERM 572 419755 - 419741 - g 79 -5.6 -4.87665 | overlap 419743 TCGCACTTAGAAAAA CAGCTG AAA CAGCAG ATGGAACAGCTATTG TERM 573 419753 - 419743 - g 71 -6.8 -4.06182 | overlap 419741 GCACTTAGAAAAACA GCTG AAA CAGC AGATGGAACAGCTAT xseA 418781 - 420109 + | exodeoxyribonuclease VII large subunit TERM 574 420136 - 420120 - T 80 -10.9 -3.23711 | opp_overlap 420113, overlap 420112 TCTAGAATGTATTAA GGGGAAT ACC ATTCCCC CCAATCCTAATCTAC parC 422350 - 420143 - | DNA topoisomerase IV subunit A TERM 575 421344 - 421316 - G 75 -10.4 -3.05384 | opp_overlap 421315 421316 CGTTGTTCTACGGAA TGCTAACCACTC AGTAA GAATGGTCAGCA AATTTTTCACCGCAG TERM 576 422591 - 422572 - g 80 -2.2 -5.60556 | AATATAAAACAAAAA TCAATAGA AGAT TATATTGA TTCAAATACAGAAAA HAPS_0382 422482 - 422847 + | hypothetical protein TERM 577 422940 - 422971 + T 90 -8.7 -4.43037 | opp_overlap 422940 TTTGATGAGAAGTAA GGGGGAGACTG GATTAGAAAG CAGTCACCCCC TTTGATTTTTATTAA TERM 578 422971 - 422940 - T 75 -8.7 -3.47322 | opp_overlap 422940 TTTGATGAGAAGTAA GGGGGAGACTG GATTAGAAAG CAGTCACCCCC TTTGATTTTTATTAA mhpC 423782 - 423000 - | putative esterase TERM 579 424129 - 424139 + G 79 -6.8 -4.59773 | AGTTGAATTTGTGTT GGCT TCG AGCC TTTTTAACAATGAAA seqA 423890 - 424450 + | negative replication initiation regulator SeqA TERM 580 425431 - 425451 + G 72 -8.3 -3.56092 | opp_overlap 425438 425439 425443 TGCGTTAGGCTATTG GCAACAAGG CAA CATTGTTGC TTTACACAATGCTCA TERM 581 425606 - 425618 + G 82 -6.3 -4.91109 | CTACAAAAATATCCG CTTGT AAA ACAAG TTTTTGTGGTGCCAG menE 424454 - 425869 + | O-succinylbenzoic acid--CoA ligase kefA 425862 - 429155 + | potassium efflux protein KefA, small-conductance mechanosensitive channel TERM 582 429157 - 429188 + F 91 -9.6 -4.64766 | gap 1, opp_overlap 429153 429156 429175, overlap 429153 429151 GCGACATCAAATGAT TTGT-AGGGGCAAAT CAT ATTTGCCCCAAACAA TTTTTGGAATATCAG TERM 583 429212 - 429230 + F 70 -8.8 -3.06341 | overlap 429211 ATATCAGATTTGTAG GGTGGGGT TTT AGCCCACC ATTTTAAAACCTATT aroC 429281 - 430363 + | chorismate synthase TERM 584 430395 - 430376 - f 90 -12.2 -3.52918 | opp_overlap 430376 430379, overlap 430379 TAATTGTTAAATCAA GAACGCCA CATT TGGCGTTC TCATATACTCTTATT TERM 585 430376 - 430395 + F 83 -12.2 -2.71348 | opp_overlap 430376 430379, overlap 430379 TAATTGTTAAATCAA GAACGCCA CATT TGGCGTTC TCATATACTCTTATT TERM 586 430392 - 430379 - f 77 -8.1 -3.89354 | opp_overlap 430376 430379, overlap 430376 TTGTTAAATCAAGAA CGCCA CATT TGGCG TTCTCATATACTCTT TERM 587 430379 - 430392 + F 72 -8.1 -3.49516 | opp_overlap 430379 430376, overlap 430376 TTGTTAAATCAAGAA CGCCA CATT TGGCG TTCTCATATACTCTT TERM 588 430471 - 430442 - f 75 -7.4 -4.24294 | ATCAATCATTTAAAA TCATTTTTTCGA TCTACG TCGAAAAAATAA AAATTTATCCTTTTG TERM 589 430531 - 430552 + F 80 -10.3 -3.34517 | overlap 430529 AGTGTTTTATCTTTT GTGTGATAT GATT ATATCACAC TCTTTGAAGGGAGCT higB 430571 - 430846 + | plasmid maintenance system killer/proteic killer protein, RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system higA 430855 - 431151 + | plasmid maintenance system antidote protein, XRE family/addiction module antidote protein, HigA family/PSEEN1946 proteic killer active protein mlc 432372 - 431167 - | transcriptional repressor of carbohydrate metabolism; PTS operon /sugar kinase TERM 590 432072 - 432099 + g 70 -3.4 -4.91109 | gap 1, opp_overlap 432063 432080, overlap 432074 GGTAAATGAGCTTGC CACTCAAATCGCA AAG TGCGATA-GAGAG TTTTTGTGGTGCAAG TERM 591 432092 - 432080 - G 70 -7.7 -3.64822 | opp_overlap 432074 432072 AGCTTGCCACTCAAA TCGCA AAG TGCGA TAGAGAGTTTTTGTG rnd 432547 - 433674 + | ribonuclease D TERM 592 434071 - 434089 + F 76 -7.5 -4.05512 | TCATAGGCACGCAGT CACGTTT ACCCA AAACGTG TTAATTTTTTCTTAT TERM 593 434377 - 434360 - g 77 -6.3 -4.49389 | AGTGCAGAATTAAAA GACAGCA TTGG TGCTATC GGTCACCGTATCGTT ackA 434123 - 435322 + | acetate kinase HAPS_0394 435443 - 435288 - | hypothetical protein TERM 594 435332 - 435347 + gF 100 -10.4 -5.54079 | opp_overlap 435332 TTATAATATCTAAAA CCTGCC AGAT GGCAGG TTTTTTACTTTTTAC TERM 595 435347 - 435332 - Gf 90 -10.4 -4.30441 | opp_overlap 435332 TTATAATATCTAAAA CCTGCC AGAT GGCAGG TTTTTTACTTTTTAC pta 435431 - 437566 + | phosphate acetyltransferase TERM 596 437585 - 437571 - TR 74 -3.6 -5.1675 | overlap 437575 CGACTCAGTAAAAAA TAAACT GCT AGTTCA AGGACTGAATCCAGT TERM 597 437633 - 437575 - TR 86 -6.4 -5.0917 | gap 3, opp_overlap 437586 437587, overlap 437571 437590 437595 TCAGTAAAAAATAAA CTG-C-TAGTTCAA-GGACTGAATCCAGT TACT ACTGGACTCAGTCCGTTTAAATACGTCAG TTATACAGCCCAATA TERM 598 437586 - 437619 + Tr 95 -12.5 -3.66999 | opp_overlap 437575 437590 437595, overlap 437587 TAAACTGCTAGTTCA AGGACTGAATCCAGT TACT ACTGGACTCAGTCCG TTTAAATACGTCAGT TERM 599 437587 - 437618 + Tr 100 -16 -2.79878 | opp_overlap 437575 437590 437595, overlap 437586 AAACTGCTAGTTCAA GGACTGAATCCAGT TACT ACTGGACTCAGTCC GTTTAAATACGTCAG TERM 600 437615 - 437590 - TR 85 -12.7 -2.73364 | opp_overlap 437587 437586, overlap 437575 437595 CTGCTAGTTCAAGGA CTGAATCCAGT TACT ACTGGACTCAG TCCGTTTAAATACGT HAPS_0395 438636 - 437677 - | ABC transporter, substrate-binding protein TERM 601 438195 - 438213 + g 73 -7.5 -4.01888 | overlap 438171 GTTTTTGGATTAGTG CCAATTG TGGTT CAATTGG TTTATGATCTGAAAT sspB 439222 - 438815 - | stringent starvation protein B/ClpXP protease specificity-enhancing factor TERM 602 439131 - 439160 + g 71 -5.1 -4.53034 | ACATCTGTATCTACG TACTCCGAATTTA TTAA TAAATATGGGGTA TTTTCATTATCTAAA sspA 439865 - 439224 - | stringent starvation protein A/glutathione S-transferase TERM 603 439436 - 439426 - G 73 -5.4 -4.64763 | TCACTCAAAAAATAA TCAG AAT CTGA AAATACTGGACCTAA TERM 604 440244 - 440230 - g 71 -7.2 -3.80893 | ACTTGATAATCTAAA TCAGTA CAT TACTGA CAATATGTCTATCCA HAPS_0398 440081 - 440398 + | hypothetical protein TERM 605 440409 - 440430 + T 100 -8.8 -4.82667 | opp_overlap 440400 440395 440409 AGTAAATGAACAGAA CGGTAAGT CGCCAA ACTTACCG TTTTTCATATCCTAC TERM 606 440430 - 440409 - T 81 -9.5 -3.80697 | opp_overlap 440409, overlap 440400 440395 AGTAAATGAACAGAA CGGTAAGTC GCCA AACTTACCG TTTTTCATATCCTAC folC 441740 - 440442 - | folylpolyglutamate synthase accD 442630 - 441740 - | acetyl-CoA carboxylase subunit beta TERM 607 442601 - 442611 + g 70 -2.6 -5.08824 | TGATGATGAAGACGT TTTT CCT AAAA TTTTTTCAATCCAGC chpA 443074 - 442718 - | growth inhibitor, PemK-like, autoregulated/transcriptional modulator of MazE/toxin, MazF, plasmid stable inheritance protein K chpS 443343 - 443074 - | antitoxin ChpS/ transcriptional regulator/antitoxin, MazE/ probable plasmid stable inheritance protein I aspC 443594 - 444784 + | aromatic amino acid aminotransferase HAPS_0404 445779 - 444865 - | transporter, Drug/Metabolite Exporter family TERM 608 446197 - 446167 - g 76 -9.1 -3.72576 | TGTTCTGTGATGAAA GCTCGCAACAGAT TGTCG ATCTGCTACAAGC CGAATGTGAGAAAGG HAPS_0405 445980 - 447038 + | flavoprotein TERM 609 447082 - 447036 - T 83 -9.1 -4.32046 | gap 1, opp_overlap 447052, overlap 447041 447043 GGGGTAAAAAGTAAA TGA-AACATTTGTAGAAGATCA ATTC TGATCTTCTACAAAAACTATCA ATATTTATAGGAGGG TERM 610 447076 - 447041 - T 91 -11.4 -4.21644 | opp_overlap 447052, overlap 447036 447043 AAAAAGTAAATGAAA CATTTGTAGAAGATCA ATTC TGATCTTCTACAAAAA CTATCAATATTTATA TERM 611 447074 - 447043 - T 100 -16.2 -3.67051 | opp_overlap 447052, overlap 447041 447036 AAAGTAAATGAAACA TTTGTAGAAGATCA ATTC TGATCTTCTACAAA AACTATCAATATTTA nanA 447983 - 447102 - | N-acetylneuraminate lyase HAPS_0407 448931 - 448065 - | putative HTH-type transcriptional regulator HAPS_0408 449403 - 448933 - | hypothetical protein TERM 612 449490 - 449473 - H 70 -2.7 -5.20781 | overlap 449475 TAGCATAAAAGAAAA TATACTC CATA GAGTAAA ACTTTCTCGACCAAA TERM 613 449592 - 449602 + H 81 -4 -5.4505 | ACAGAGCCTTATTCC CTAT ATC ATAG TTTTTTATTGGCAAG TERM 614 450461 - 450435 - H 71 -8.8 -3.23708 | opp_overlap 450440, overlap 450440 CGCCCTTAAAAACGA CAAAACCGCA ACTTTCG TGCGGTTCTG AGCGTTTGGCGTGAT TERM 615 450456 - 450440 - H 74 -5.1 -4.72556 | opp_overlap 450440, overlap 450435 TTAAAAACGACAAAA CCGCA ACTTTCG TGCGG TTCTGAGCGTTTGGC higB 450581 - 450859 + | plasmid maintenance system killer/proteic killer protein, RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system higA 450871 - 451152 + | plasmid maintenance system antidote protein, XRE family/addiction module antidote protein, HigA family/PSEEN1946 proteic killer active protein HAPS_0412 451886 - 451149 - | phage-related minor tail protein L TERM 616 451845 - 451861 + g 76 -4.4 -5.0538 | ATTTTGTTCAAGTTT TGGCAG TTCGT TTGCCA TTTTTTGGGGTAGGG TERM 617 452362 - 452397 + r 83 -7.1 -4.77165 | gap 1, opp_overlap 452362 CACAATTTGTGTAAA TACCTGTTTCTGAGAT AATAC AT-TCAGACACAGGTA TTTTATTATGAACGA TERM 618 452681 - 452667 - R 86 -10 -4.10657 | GTAGACGGTTTAAAA GGCTTC CCG GAAGCC ATCAATGCAGTCTAT TERM 619 452904 - 452921 + r 84 -4.9 -5.32944 | gap 1, opp_overlap 452904 GGCTGGGAAGATAAC TG-GGCAA ATA TTGCCACA TTTTTTGATTATCCG TERM 620 453143 - 453166 + r 71 -8.9 -3.18274 | ATTTATGATTGATTT TGGTGATCG CCTAGA CGATCACCG TTAAGTTGAAATGGG HAPS_0415 454711 - 453224 - | chromosome segregation ATPase TERM 621 454109 - 454124 + g 70 -3.3 -4.91712 | ATTAAACGAGCGAAT TGCTA ATTTAA TAGCA TTTTTCTCCATTGCC HAPS_0416 455176 - 454829 - | putative phage-related lipoprotein HAPS_0417 455579 - 455253 - | phage minor tail protein TERM 622 455514 - 455528 + g 82 -8.6 -4.1673 | opp_overlap 455513 ATTACCAAATTTAAG CCTGAT TAC ATCAGG TTTCTTAGCAAGTTG HAPS_0418 455916 - 455581 - | hypothetical protein TERM 623 455755 - 455780 + g 84 -12.7 -2.97802 | gap 1, opp_overlap 455755, overlap 455752 TAATTCATAAAAAAA GCCCAGCAGATA ACT TATC-GCTGGGC TAATTTCGATATTCT TERM 624 455780 - 455755 - G 100 -12.7 -5.66684 | gap 1, opp_overlap 455752 455755 TAATTCATAAAAAAA GCCCAGCAGATA ACT TATC-GCTGGGC TAATTTCGATATTCT TERM 625 455834 - 455875 + g 72 -3.1 -5.04175 | gap 1, opp_overlap 455834 GTCTGCTCTTGAATA GCCAAAAGATGTT-CTCGCA AGG TGCAATTAGAATCTTTTGGC TTTTTGTCTAATTCA HAPS_0419 456845 - 455925 - | hypothetical protein TERM 626 456923 - 456900 - R 86 -6.6 -5.18726 | opp_overlap 456900 CGTGGATAATAAAAA CCGCACGATC TTGC GAAAGTGCGG TTAATTTTCATGTAA TERM 627 456968 - 456946 - R 81 -4.1 -5.4833 | TCATGTAATAAAAAA GGTGCGATC GTCAT AACCACACC TTAAATATCAAGTAA TERM 628 457601 - 457626 + r 88 -10.5 -3.9444 | opp_overlap 457601 GCAGGCAATAAAAAA CCGCTTACACA TTGC TGTATAAGCGG TTTAGTTGAAATTTA TERM 629 457626 - 457601 - R 100 -12.7 -5.4833 | opp_overlap 457601 GCAGGCAATAAAAAA CCGCTTACACA TTGC TGTATAAGCGG TTTAGTTGAAATTTA TERM 630 457671 - 457654 - R 100 -7 -5.64274 | opp_overlap 457654 TTAGGTATAAAAAAA CCTAGC GCTTAG GCTAGG TTAATAATTGTAGCT TERM 631 458694 - 458716 + r 82 -10.7 -3.54741 | AAACCGCCATTTGTA GGTATCAAG ATTTC CTTGATACC TTTCCCAAAATGCTC TERM 632 458983 - 459008 + r 88 -10.5 -3.9444 | opp_overlap 458983 ACAGGTATAAAAAAA CCGCTTACACA TTGC TGTATAAGCGG TTTAGTTGAAATTTA TERM 633 459008 - 458983 - R 100 -12.7 -5.65177 | opp_overlap 458983 ACAGGTATAAAAAAA CCGCTTACACA TTGC TGTATAAGCGG TTTAGTTGAAATTTA TERM 634 459053 - 459036 - R 100 -7 -5.64274 | opp_overlap 459036 TTAGGTATAAAAAAA CCTAGC GCTTAG GCTAGG TTAGTAGAAATAGTT HAPS_0423 459174 - 459049 - | hypothetical protein TERM 635 459208 - 459185 - R 71 -8.9 -3.18274 | CCCATTTCAACTTAA CGGTGATCG TCTAAG CGATCACCA AAATCAATCATAAAT TERM 636 459447 - 459430 - R 84 -4.9 -5.32944 | gap 1, opp_overlap 459430 CGGATAATCAAAAAA TGTGGCAA TAT TTGCC-CA GTTATCTTCCCAGCC TERM 637 459670 - 459684 + r 86 -10 -4.10657 | ATAGACTGCATTGAT GGCTTC TGG GAAGCC TTTTAAACCGTCTAC TERM 638 460087 - 460052 - R 83 -7.1 -4.77165 | gap 1, opp_overlap 460052 TCGTTCATAATAAAA TACCTGTGTCTGA-AT GTATT ATCTCAGAAACAGGTA TTTACACAAATTGTG TERM 639 460829 - 460853 + r 90 -8.7 -4.71307 | opp_overlap 460829 AAAGATAAGAAAAAA GCCTTGAAT CATTGAT ATTCAAGGC TTTATTTAGTTTTTA TERM 640 460853 - 460829 - R 100 -8.7 -5.66338 | opp_overlap 460829 AAAGATAAGAAAAAA GCCTTGAAT CATTGAT ATTCAAGGC TTTATTTAGTTTTTA secG 461329 - 461000 - | preprotein translocase subunit SecG TERM 641 461360 - 461376 + r 82 -10.9 -3.29324 | opp_overlap 461360, overlap 461355 CTGTTCAAAATAAAA TTCCGCA GGT TGCGGAA TTAACTTTCGATGGC TERM 642 461376 - 461360 - R 100 -10.9 -5.07652 | opp_overlap 461360 461355 CTGTTCAAAATAAAA TTCCGCA GGT TGCGGAA TTAACTTTCGATGGC topB 463377 - 461455 - | DNA topoisomerase III mepA 464209 - 463385 - | penicillin-insensitive murein endopeptidase TERM 643 463998 - 464009 + g 73 -5.8 -4.56597 | AATAATTGTGGGTGT CCGT AATA ACGG TTTTTGACAGAACGA pyrG 464965 - 464567 - | CTP synthetase, potential integral membrane protein TERM 644 465047 - 465024 - R 100 -11.8 -5.13343 | opp_overlap 465024 TAAGCCAAAACAAAA GGCTAAGCAC TTTC GTACTTAGCC TTTGTTGGTAATACG TERM 645 465024 - 465047 + r 86 -9.6 -4.2704 | opp_overlap 465024 TAAGCCAAAACAAAA GGCTAAGCAC TTTC GTACTTAGCC TTTGTTGGTAATACG HAPS_0433 465590 - 465228 - | predicted transcription regulator containing HTH domain HAPS_0434 465902 - 465600 - | hypothetical protein TERM 646 465790 - 465806 + g 81 -2.9 -5.68023 | TGTTTAATTTCATTT GCGGTTT GCC AATTCGC TTTTTTTACTTCTGA TERM 647 465932 - 465944 + r 93 -7.7 -5.11937 | ATAACTTACACTTTA TCCCA GTT TGGGA TTTTTTGCAATTCTT HAPS_0435 466041 - 465922 - | hypothetical protein TERM 648 466078 - 466066 - H 76 -3.4 -5.33405 | TCCATTAAATAAAAA TAGG ATTAG CCTA ACAGAAACCATCATA TERM 649 466127 - 466116 - H 75 -7.2 -4.29738 | TGATATGTATCAAAA GGGG TTTG CCCC GATAAAATAACGTTG moaA 466329 - 467348 + | molybdenum cofactor biosynthesis protein A TERM 650 467399 - 467415 + F 88 -7.9 -4.72556 | overlap 467400 TTATGAAACATTGTA GGGACGC TTG GCGTCCA TTTTCTGATTTTTCA TERM 651 467400 - 467414 + F 85 -11.4 -3.41907 | overlap 467399 TATGAAACATTGTAG GGACGC TTG GCGTCC ATTTTCTGATTTTTC TERM 652 467470 - 467449 - f 72 -9.5 -2.63432 | gap 1, opp_overlap 467446, overlap 467448 ATATATTTAATTAAT GCGGACACAC GCA GTGTGTCC-C TACATCATTAATATT moaC 467502 - 467981 + | molybdenum cofactor biosynthesis protein C TERM 653 468045 - 468026 - f 88 -7.8 -4.78839 | overlap 468027 AATGGGATAAGAAAA TGGTGGGT TAAG ACCCACCC TACTACGAGATAAAT TERM 654 468044 - 468027 - f 82 -11.3 -3.46219 | overlap 468026 ATGGGATAAGAAAAT GGTGGGT TAAG ACCCACC CTACTACGAGATAAA moaD 468066 - 468311 + | molybdopterin converting factor, small subunit TERM 655 468540 - 468526 - g 71 -4.2 -4.90266 | opp_overlap 468537, overlap 468528 TTGATGAAGCAAAAA GCCGTT GGG AACTGC AACGCGTTGCGGTTA moaE 468312 - 468764 + | molybdopterin converting factor, large subunit HAPS_0440 468796 - 469284 + | metalloprotease TERM 656 469328 - 469347 + G 75 -5.6 -4.69656 | overlap 469330 469344 CCCATCTTCTTTTGA GACTGCCG ATGT CGGCGGTA TTTTCTTACCTGATT TERM 657 469330 - 469345 + G 73 -8.2 -3.95554 | overlap 469328 469344 CATCTTCTTTTGAGA CTGCCG ATGT CGGCGG TATTTTCTTACCTGA TERM 658 469667 - 469642 - g 79 -8.9 -3.90112 | CGCTGGTCAATGAAA TTCTGCCCCCG TTTA CGGGGGAAGTA CCCTGCGAAGCAGGG TERM 659 469682 - 469668 - g 79 -11.4 -2.71731 | TTTACGGGGGAAGTA CCCTGC GAA GCAGGG GGAAGGGGGGAAATT TERM 660 470267 - 470221 - g 81 -7 -4.66537 | overlap 470223 TGCTGGAAGATAAAA TCCCCCCCTCAGCCTTCGGCAG CTC CCCCCGCAAGCAGGGGGAGCGA AGCATAGAGCAATAT HAPS_0441 469284 - 471134 + | acetyltransferase TERM 661 471153 - 471168 + F 93 -3.3 -6.11019 | opp_overlap 471135 AACCGCTTGCGATTT TGTGA ATGCGA TCACA TTTTTTTTGCTTTTT TERM 662 471589 - 471571 - g 71 -5.2 -4.55128 | opp_overlap 471571 ATCGGTAAAGCAAAA CCAGAAGG TAT CCCTGTGG TATTCTTTAACAAAG mglB 471259 - 472251 + | galactose ABC transporter periplasmic-binding protein/LacI transcriptional regulator TERM 663 472265 - 472287 + F 86 -8.5 -4.42788 | gap 1, opp_overlap 472265, overlap 472266 AATGATTTGTAGTAA T-GGGGGAAG GGAT CTTCCCCCTA TTTTGTGAGGTTGGA TERM 664 472286 - 472265 - f 77 -10.1 -3.16039 | opp_overlap 472265 472266 AATGATTTGTAGTAA TGGGGGAAG GGAT CTTCCCCCT ATTTTGTGAGGTTGG TERM 665 472266 - 472285 + F 100 -13.6 -3.81948 | opp_overlap 472265, overlap 472265 ATGATTTGTAGTAAT GGGGGAAG GGAT CTTCCCCC TATTTTGTGAGGTTG TERM 666 472565 - 472545 - g 73 -6.9 -4.19238 | overlap 472546 CTGTTAATTTTAAAA CCTCTAAAG AAG CCTTAGAGA ATGGAATTTCAATGG mglA 472304 - 473824 + | galactose ABC transporter transporter ATP-binding protein mglC 473841 - 474851 + | galactose ABC transporter inner membrane component TERM 667 474861 - 474897 + T 82 -6.7 -5.03314 | opp_overlap 474861 AAATAGTCATAGATA GGGCTTAAAATCTTTTA TAA TACAAGGCTTTAAGCTC TTTTTTAAAAATGAA TERM 668 474956 - 474919 - T 95 -7.2 -5.30199 | opp_overlap 474919 474914 AAAAATGAATAAAAA GAGTTGGTAATAATTA GAAAAA TAATTAAAACCAACTC TTTTGTCTATATGCC TERM 669 474919 - 474956 + T 81 -7.2 -4.64844 | opp_overlap 474919, overlap 474914 AAAAATGAATAAAAA GAGTTGGTAATAATTA GAAAAA TAATTAAAACCAACTC TTTTGTCTATATGCC metQ 475819 - 475028 - | DL-methionine transporter substrate-binding subunit/outer membrane lipoprotein 3 precursor (PLP3) TERM 670 475158 - 475172 + g 76 -4.3 -5.1523 | opp_overlap 475158 CGAGAAACTATTAAA TTCAC ATAAG GTGAA TTTTTATCTTCTACA TERM 671 475873 - 475845 - R 84 -3.3 -5.64873 | gap 1, opp_overlap 475838, overlap 475838 CTCAATAATAAAAAA GAGTGA-CTAGT ACCTAG ACTAAATCACTC TCTTTTATTTAGTTA plpA 476730 - 475891 - | ABC-type metal ion transport system, periplasmic component/outer membrane lipoprotein 1 precursor TERM 672 476630 - 476655 + g 95 -6.1 -5.57729 | gap 1 GCTTGTGCTGCTGGA GCAGGTGCTACC GCT GGT-GCTTCTGC TTTTTTCTCTTCTTT TERM 673 476782 - 476800 + r 73 -3.1 -5.1101 | opp_overlap 476794 CGATGATCGTAACGT TTTGCGA GATTA TCGCCAA TTTTTTGGCTAATCA metI 477440 - 476763 - | D-methionine transport system permease protein MetI metN 478464 - 477430 - | ABC-type metal ion transport system, ATPase component marC 478741 - 479394 + | possible MarC family multiple antibiotic resistance transporter oppA 479396 - 480937 + | putative oligopeptide transporter, periplasmic-binding protein, OppA mrp 480938 - 482035 + | ATPases involved in chromosome partitioning TERM 674 482050 - 482084 + F 100 -20.4 -2.69468 | opp_overlap 482050, overlap 482052 ATCGTGATATCAAAA TAGGAGCTTATAACAA AAT TTGTTATAAGCTCCTA TCATATCTACCACTG TERM 675 482084 - 482050 - f 100 -20.4 -4.3467 | opp_overlap 482050 482052 ATCGTGATATCAAAA TAGGAGCTTATAACAA AAT TTGTTATAAGCTCCTA TCATATCTACCACTG TERM 676 482052 - 482082 + F 100 -18.6 -2.88999 | opp_overlap 482050, overlap 482050 CGTGATATCAAAATA GGAGCTTATAACAA AAT TTGTTATAAGCTCC TATCATATCTACCAC TERM 677 483739 - 483752 + F 70 -8.1 -3.42574 | overlap 483706 CCCGTTGGACCCGTT GGACC CGTA GGTCC TTGTGGTCCCGTTGG TERM 678 484052 - 484069 + F 72 -7.7 -3.65693 | gap 1, overlap 484044 CACCCTTAGCCCCTG CTGGACCC GCA GGG-CCAG TTTCACCTCTCTGAT TERM 679 486335 - 486356 + F 100 -15.9 -3.13164 | GCTTTCGCTCGGGCA CTTCCCCCG CAAG CGGGGGAAG TTAACTCCTTGACAA argE 486714 - 487856 + | acetylornithine deacetylase TERM 680 487880 - 487866 - T 100 -8.5 -5.47218 | TGCTAGGTAAAAAAA GCCCC TGTAC GGGGC AACTCTTTTGATCTA moeB 488748 - 488005 - | molybdopterin biosynthesis protein MoeB yciH 489050 - 488751 - | translation initiation factor Sui1, translation initiation factor 1 (eIF-1/SUI1) pyrF 489774 - 489082 - | orotidine 5'-phosphate decarboxylase HAPS_0457 490983 - 489790 - | lipopolysaccharide N-acetylglucosaminyltransferase TERM 681 490445 - 490460 + g 70 -2.6 -5.00884 | gap 1 ATTTTATCCATTTCA GGCTCTA TTC TA-AGCC TTTTTTCAGCGACAT TERM 682 490469 - 490482 + g 78 -3.8 -5.1925 | CTAAGCCTTTTTTCA GCGA CATTAA TCGC TTTTTTCCATTCTCG TERM 683 490877 - 490859 - G 100 -14.6 -3.79044 | opp_overlap 490857 490856 AAAAGAAAGTTCAAA CCCGTGAC ATA GTCACGGG AAAATTTGTTATTAA HAPS_0458 491267 - 490983 - | predictive membrane protein TERM 684 491324 - 491305 - R 88 -5.7 -5.626 | opp_overlap 491305 TAGTTTATAAAAAAA CGACACC CCACAT AGTGTCG CTTTCAGAGAATTAA ihfB 491617 - 491336 - | integration host factor, beta subunit/bacterial nucleoid DNA-binding protein rpsA 493350 - 491683 - | 30S ribosomal protein S1 TERM 685 493437 - 493418 - R 72 -8 -3.8211 | GGTTAGGGATAACAA CTTAACAA TCCT TTGTTAAG CAAACAAAATTACAA cmk 494112 - 493447 - | cytidylate kinase degS 495150 - 494122 - | protease DegS precursor TERM 686 495215 - 495243 + r 95 -10.3 -4.59081 | opp_overlap 495179 495214 495213 495223, overlap 495179 TATTAATAAAAATTT TGAACGGACACAC GCA GTGTGTCCCTACA TTTTATATAAATTTA galU 496147 - 495260 - | UTP-glucose-1-phosphate uridylyltransferase TERM 687 496201 - 496181 - R 86 -9.7 -4.18042 | opp_overlap 496179 496177 496181 TTTAGATAAAGTAAA CCGCCTACC TTA AGTAAGCGG TCTGTTTTGCACAAA csrA 496512 - 496327 - | carbon storage regulator (could also regulate swarming and quorum sensing) alaS 499203 - 496576 - | alanyl-tRNA synthetase TERM 688 496957 - 496971 + g 83 -6.4 -5.0809 | TGCAAGTTTATCTTT GAGCTG TTG TAGCTC TTTTTCTACTTTCTT TERM 689 499393 - 499344 - R 79 -5 -5.17576 | overlap 499348 CATTAAGTCAAAAAA TAAACCGCCAGAGTAACTGAAT GCGACA ACTCAGCTACACAAGCGGTCTT TTTTCACGTTTTATT TERM 690 499389 - 499348 - R 93 -8 -5.08015 | overlap 499344 AAGTCAAAAAATAAA CCGCCAGAGTAACTGAAT GCGACA ACTCAGCTACACAAGCGG TCTTTTTTCACGTTT uspA 499853 - 499428 - | universal stress protein A TERM 691 500719 - 500742 + G 76 -7.4 -4.25104 | overlap 500707 CGCCCCTTTTGCAAC GCAAGGGTTA CTGC TTGCCCTTGC TTTTGGTGAACGGGC rec2 500165 - 502444 + | recombination protein 2 / DNA internalization-related competence protein ComEC/Rec2 / predicted membrane metal-binding protein TERM 692 502587 - 502549 - T 74 -9.8 -2.7185 | opp_overlap 502541 502549 502558, overlap 502551 502554 502557 502563 ACTATCTCTCAATTA GATAAGCACCCAAATAAT AAC ATTACTTGGTTTCTTATC TGAATTGAATCTATA TERM 693 502558 - 502578 + T 70 -5.5 -4.40601 | opp_overlap 502557 502554 502551 502549 502563, overlap 502549 502541 CAATTAGATAAGCAC CCAAATAAT AAC ATTACTTGG TTTCTTATCTGAATT yciI 502908 - 502612 - | YciI-like protein HAPS_0469 503360 - 502920 - | putative acyl-CoA thioester hydrolase ispZ 503907 - 503344 - | intracellular septation protein A HAPS_0471 504644 - 503916 - | hypothetical protein HAPS_0472 504823 - 505257 + | membrane protein tadA 505712 - 505239 - | tRNA-adenosine deaminase, cytosine/adenosine deaminases TERM 694 505864 - 505837 - R 100 -13.6 -3.36803 | gap 1, overlap 505802 505849 CAATTTTAGGTACAA GTAGCGGACACAC GCA GTGTGTCC-CTAC GCATCAGATTATCGA deaD 507684 - 505873 - | cold-shock DEAD box protein A-like protein TERM 695 507437 - 507454 + g 72 -9.9 -2.94924 | overlap 507436 507445 ATTGCTAATTCACGG GTTGGTG CCAT CACCAAC ATTTGTGGGTGACGC nlpI 508882 - 507956 - | lipoprotein NlpI, contains TPR repeats TERM 696 508091 - 508081 - G 73 -6.8 -4.24204 | opp_overlap 508081 TAGCTAGACGGAAAA GGCT TTT AGCC TCTTCAAGCTGATTC TERM 697 508947 - 508920 - R 100 -13.6 -3.67622 | gap 1, overlap 508917 508916 508922 CATTCTTAAAATGAA GATCCCTTCCTCA ATG TGAGGAAGGGA-C AGAAGTGATTATTCT TERM 698 508946 - 508922 - R 100 -17.3 -3.41359 | overlap 508917 508920 508916 TTCTTAAAATGAAGA TCCCTTCCTCA ATG TGAGGAAGGGA CAGAAGTGATTATTC pnp 511085 - 508956 - | polynucleotide phosphorylase/polyadenylase TERM 699 511189 - 511138 - R 76 -6 -4.58395 | opp_overlap 511139, overlap 511139 511140 TTTATTTCCTAAAAA TTGCGACTAGCAAAAGTAATCTCA CACA TCAAATTACTTTTGATAGCCGCCT CTTAGAATGCGAAGA TERM 700 511188 - 511139 - R 76 -9.5 -3.34716 | opp_overlap 511139, overlap 511138 511140 TTATTTCCTAAAAAT TGCGACTAGCAAAAGTAATCTCA CACA TCAAATTACTTTTGATAGCCGCC TCTTAGAATGCGAAG TERM 701 511187 - 511140 - R 85 -13 -2.60508 | opp_overlap 511139, overlap 511139 511138 TATTTCCTAAAAATT GCGACTAGCAAAAGTAATCTCA CACA TCAAATTACTTTTGATAGCCGC CTCTTAGAATGCGAA TERM 702 511370 - 511400 + r 84 -9.9 -3.65827 | gap 2, opp_overlap 511364 TTTGCCAAATCTCCC CCAG--CCCCTCTTT GCT AAAGAGGGGAACTGG TTTAGATGAAAATTC TERM 703 511507 - 511483 - R 75 -7.1 -4.31293 | overlap 511484 511485 TTACAGATGAACAAA TCCCCCTCTTT AGC AAAGAGGGGCT GGGGGAGATTTGGCA TERM 704 511506 - 511484 - R 79 -10.6 -3.18053 | overlap 511483 511485 TACAGATGAACAAAT CCCCCTCTTT AGC AAAGAGGGGC TGGGGGAGATTTGGC TERM 705 511505 - 511485 - R 91 -14.1 -2.50109 | overlap 511484 511483 ACAGATGAACAAATC CCCCTCTTT AGC AAAGAGGGG CTGGGGGAGATTTGG TERM 706 513414 - 513387 - R 100 -15.8 -5.23316 | opp_overlap 513385 513384 513395 TATTACATTAAAAAA GCGACAAAGTTA AAAA TAACTTTGTCGC AGATTATTACATAGT ushA 515092 - 513446 - | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor dgkA 515501 - 515139 - | diacylglycerol kinase TERM 707 515414 - 515383 - G 100 -6.7 -5.71983 | gap 1, opp_overlap 515387, overlap 515387 GGAATGAGAAAAAAA GAAAGCCACACTTC TTGAC GAAATGCGGC-TTC GTGAATATATGCACT TERM 708 515411 - 515387 - G 93 -8.6 -5.27709 | opp_overlap 515387, overlap 515383 TGAGAAAAAAAGAAA GCCACACTTC TTGAC GAAATGCGGC TTCGTGAATATATGC TERM 709 515541 - 515514 - R 80 -8.6 -3.93236 | opp_overlap 515522 CATTAACTTTATAAA TAGAATACGACT AATT AGTCTTATTCTA ACGCAATTACCTGTT arcB 517893 - 515659 - | aerobic respiration control sensor protein ArcB TERM 710 516171 - 516183 + g 75 -7.7 -4.08887 | CATCCATTCCTTGTT GCTGA TAT TCAGC TTTGGTTTGCATAAT TERM 711 517993 - 517978 - R 73 -3.4 -5.10077 | opp_overlap 517971, overlap 517987 AAAGAGGCTAAAAAA TTTAAT TGAT ATTAAA CGCTTCAATATAAGG ostA 520231 - 517979 - | organic solvent tolerance protein TERM 712 518007 - 518017 + g 81 -5.4 -5.04987 | opp_overlap 518007 AACGCTTCAATATAA GGAA GAA TTCC TTTTTTAAGCATCTT TERM 713 519180 - 519197 + g 74 -4.2 -5.09225 | opp_overlap 519180 ATCTTTGGTAACACA TGATAG GTAGTG CTATCA TTTTTTACGTAAAAT hemN 521747 - 520380 - | coproporphyrinogen III oxidase TERM 714 520477 - 520465 - G 73 -6.9 -4.24342 | TTTCTGATCAATAAA CGCCC TCG AGGCG AAACAACAATCCCCT HAPS_0483 522196 - 521750 - | ATP-dependent Lon protease, bacterial type/putative coproporphyrinogen III oxidase HAPS_0484 522738 - 522205 - | hypothetical protein sanA 523582 - 522875 - | SanA protein, membrane protein TERM 715 523527 - 523542 + g 72 -4.7 -4.82154 | CTTACACGAGCTACC CAACG TCTCCC CGTTG TTTTTGCTGTCGATT HAPS_0486 524479 - 523586 - | transporter, drug/metabolite exporter family TERM 716 525065 - 525051 - R 83 -7.1 -4.79223 | TCACAGGAGTAAAAA CAGCG TTCTT CGCTG CATTAGATCTCGTGC HAPS_0489 527768 - 525459 - | transcriptional accessory protein (S1 RNA binding domain) TERM 717 527869 - 527844 - R 81 -5.5 -5.24531 | opp_overlap 527844 527866, overlap 527866 ATTTCTGAGAAAAAA GAGGTTACATA TTAG TATAAAACCTC TCATTCCGAGAGGTT TERM 718 527866 - 527882 + r 84 -8 -4.66987 | opp_overlap 527844 527866, overlap 527844 CATATTAGTATAAAA CCTCTC ATTCC GAGAGG TTTTATTGCGCTCTA TERM 719 527882 - 527866 - R 90 -8.7 -4.49981 | opp_overlap 527844 527866, overlap 527844 CATATTAGTATAAAA CCTCTCA TTC CGAGAGG TTTTATTGCGCTCTA lpdA 529323 - 527899 - | dihydrolipoamide dehydrogenase aceF 531065 - 529440 - | dihydrolipoamide acetyltransferase TERM 720 530779 - 530813 + g 89 -12 -3.45023 | opp_overlap 530762, overlap 530762 GCACTCGCTATCGGT GCTGCCGCTGGAGCTG GTG CAGCTTCTGCGACCGC TTGTGGTGCTAGTGC TERM 721 531109 - 531085 - R 85 -12.9 -2.70932 | opp_overlap 531086 531088 GTTTTTCCTTAATCA TTCCCCCCTTT GAA AAAGGGGGGCA AGGGGGGATTTTATG aceE 533777 - 531120 - | pyruvate dehydrogenase subunit E1 TERM 722 533837 - 533813 - R 80 -8.7 -3.97413 | overlap 533811 CTGATGAATAAAACA TTGCAAAATTG TTA CAATTTTGCCA ACCGTTGAAACTTTA HAPS_0493 534038 - 533880 - | hypothetical protein TERM 723 534094 - 534105 + H 74 -4.4 -4.91511 | AGATTATTTCTTTAG GCAA ACGT TTGC TTTTTGTGATACACT TERM 724 534626 - 534616 - g 70 -5.4 -4.3255 | overlap 534612 TCCGCAATGAACAAA CACA ATC TGTG TTAGACAATCCAGAC purE 534159 - 534653 + | phosphoribosylaminoimidazole carboxylasecatalytic subunit TERM 725 535092 - 535073 - g 71 -9.4 -2.87586 | overlap 535072 ATTAAGTGATGAAAG CCAAAACA AAGG TGTTTTGG TGGTGATGAATGATG ansB 534699 - 535619 + | L-asparaginase TERM 726 535622 - 535647 + F 100 -14.1 -2.96692 | opp_overlap 535624, overlap 535625 535625 AGAGTATTTTTAATG TAGGTCGGGCA TTTA TGCCCGACTTA TATATGATAATAATC TERM 727 535645 - 535624 - f 73 -10.1 -2.53382 | opp_overlap 535622 535625 535625 AGTATTTTTAATGTA GGTCGGGCA TTTA TGCCCGACT TATATATGATAATAA TERM 728 535625 - 535644 + F 100 -13.6 -3.62616 | opp_overlap 535624, overlap 535622 535625 GTATTTTTAATGTAG GTCGGGCA TTTA TGCCCGAC TTATATATGATAATA TERM 729 535625 - 535682 + F 85 -11.4 -3.43328 | opp_overlap 535624, overlap 535625 535622 GTATTTTTAATGTAG GTCGGGCATTTATGCCCGACTTATAT ATGATA ATAATCGTTGGGTATCAATGCCCGAC TTCGTATATTTGGTA purK 535739 - 536833 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 730 537010 - 537042 + G 73 -8.7 -3.64984 | overlap 537008 537013 TTCTGCAAATTTTGA GTCTTATTGTAAAGA AGG TTTTTACAATAATAC TATTTTCCACCGTGT ppiB 536927 - 537436 + | peptidylprolyl isomerase (peptidyl-prolyl cis-trans isomerase) ubiG 537504 - 538214 + | 3-demethylubiquinone-9 3-methyltransferase TERM 731 538223 - 538208 - T 73 -6.2 -4.46212 | TGCCGTACTACAAAA TAGCTA AAAC TAGCTA CAGTAATGGCAAAAA TERM 732 538303 - 538340 + T 100 -15.1 -4.64766 | gap 1, opp_overlap 538303 AAGTGTTGGTAAAAA GTGGGC-TAAAGCCTTAT AGT ACAAGGCTTTAAGCCCAC TTTTTGAAATATGAA TERM 733 538340 - 538303 - T 100 -17.3 -4.57341 | gap 1, opp_overlap 538303 AAGTGTTGGTAAAAA GTGGGCT-AAAGCCTTAT AGT ACAAGGCTTTAAGCCCAC TTTTTGAAATATGAA TERM 734 538513 - 538489 - T 89 -12.3 -3.37895 | TCCAATAGATATTAA TGCCATTGTTA AAA TAACAACGGCA TTGAGCATGAAATTC TERM 735 539884 - 539901 + T 75 -6.9 -4.19307 | CACCCTTAGCCCCTG CTGGACC CACA GGACCAG TTTCTCCTTTATCTC TERM 736 540055 - 540099 + T 100 -13.5 -3.97947 | overlap 540057 CTCCTGCCTCTCCTT TAGGACCCGCAGGTCCAGC TACACCT GCTGGACCCGCAGGGCCTG TTTCTCCTCGCTCAC TERM 737 540057 - 540097 + T 100 -13.9 -3.5812 | overlap 540055 CCTGCCTCTCCTTTA GGACCCGCAGGTCCAGC TACACCT GCTGGACCCGCAGGGCC TGTTTCTCCTCGCTC TERM 738 540127 - 540153 + T 88 -10.8 -3.75418 | overlap 540128 CACCCGCAGGGCCTC GTGGTCCTGCTG GAC CCGCAGGACCAG TTTCACCTTTCTCTC TERM 739 540128 - 540152 + T 100 -14.3 -2.84528 | overlap 540127 ACCCGCAGGGCCTCG TGGTCCTGCTG GAC CCGCAGGACCA GTTTCACCTTTCTCT TERM 740 540228 - 540250 + T 80 -11.2 -3.12021 | CCCTGAGCACCCGCT GGGCCTGCTG GAC CCGCAGGTCC TTGAATACCTTGTTT TERM 741 541082 - 541106 + T 73 -9.3 -2.85768 | overlap 541074 541081 TCCTTTTTCACCTTG TGGTCCTCTTG CTC CAGCAGGACCA GTTTCGCCTTTTGCT TERM 742 541371 - 541393 + T 80 -9.8 -3.47307 | overlap 541387 CCTTGTGGTCCAATT GGACCTGCTG GAC CCGTAGGTCC TTGTGGTCCTGTTGC TERM 743 542736 - 542757 + T 100 -15.9 -3.13164 | GCTTTCGCTCGGGCA CTTCCCCCG CAAG CGGGGGAAG TTAGATCCTTGACAA TERM 744 543240 - 543277 + T 95 -11.5 -4.57341 | gap 1, opp_overlap 543240 TTCATATTTCAAAAA GTGAGCTTAAAGCCTTGT GCT ATAAGGCTTT-AGCCCAC TTTTTACCAACGCTT TERM 745 543277 - 543240 - T 95 -11.5 -4.64766 | gap 1, opp_overlap 543240 TTCATATTTCAAAAA GTGAGCTTAAAGCCTTGT GCT ATAAGGCTTTA-GCCCAC TTTTTACCAACGCTT metK 544522 - 543374 - | S-adenosylmethionine synthetase TERM 746 544644 - 544599 - H 73 -8.6 -3.37761 | opp_overlap 544594 544602, overlap 544594 544602 544634 CCCTAAGAAATTCAA CAAGCGGTAAGATATTG-CAAA AAAA TACGTCAATA-CTTACCGCTTG TAAGAAATTTGTTTT TERM 747 544854 - 544868 + H 79 -7.2 -4.38748 | opp_overlap 544853 544851 544854 TTTTTCAAAAATCAT CTTAGA ATG TCTAAG TTATTTATTTCTACA TERM 748 544994 - 545019 + H 100 -8.3 -5.38054 | TGCATTTTACTGAAA TGGTGAGTTGG GTAA CTGGCTCACCA TTTTTATTTATGGGA TERM 749 546397 - 546382 - g 72 -9 -3.37959 | CAATGGCAACATCAA GGGCAA ACCT TTGCCC ATCAAACCTTAGTGT mnmC 545041 - 547044 + | 5-methylaminomethyl-2-thiouridine methyltransferase HAPS_0502 547941 - 547171 - | hypothetical protein TERM 750 548178 - 548194 + r 78 -10.9 -2.62616 | opp_overlap 548157 TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA moeA 549563 - 548331 - | molybdopterin biosynthesis protein MoeA TERM 751 549639 - 549659 + H 84 -9.7 -3.6914 | opp_overlap 549639 549640, overlap 549640 GCAGTCTTTTTTAAA TGGACACAC GCA GTGTGTCCC TTGTATATTAAAATT TERM 752 549659 - 549639 - H 80 -9.7 -3.53444 | opp_overlap 549639 549640, overlap 549640 GCAGTCTTTTTTAAA TGGACACAC GCA GTGTGTCCC TTGTATATTAAAATT TERM 753 549640 - 549658 + H 90 -13.2 -2.80761 | opp_overlap 549639 549640, overlap 549639 CAGTCTTTTTTAAAT GGACACAC GCA GTGTGTCC CTTGTATATTAAAAT TERM 754 549658 - 549640 - H 88 -13.2 -2.71924 | opp_overlap 549640 549639, overlap 549639 CAGTCTTTTTTAAAT GGACACAC GCA GTGTGTCC CTTGTATATTAAAAT TERM 755 550663 - 550634 - g 88 -11.5 -3.53761 | opp_overlap 550614 GAACCTGTTTTTAAA GCCTTTTACACCC GATT GGTTGCAAAAGGC AAAGCGAAGAAAGTC HAPS_0506 549821 - 550792 + | ISNme5, family IS110 marC 551484 - 550861 - | multiple antibiotic resistance (MarC)-related protein TERM 756 553171 - 553155 - R 88 -5.7 -5.43866 | opp_overlap 553155 GAATGTGCAAAAAAA GCGGACA ATT CGACCGC TTGTAACAATGAAAA TERM 757 553384 - 553362 - R 76 -6.3 -4.65933 | overlap 553378 GACGTGGAAAATAAA GCCAAATTG ACAGA CACTTTGGC AAAGCAAGTGGCAAC HAPS_0509 553838 - 553596 - | hypothetical protein TERM 758 553801 - 553768 - GR 100 -16.3 -3.39407 | opp_overlap 553775, overlap 553771 553775 AATACAATTTGAGAA TAATAAAGGCAGAAG ATAC CCTCTGCCTTTATTA GAAAACTACAGTTTG TERM 759 553798 - 553771 - GR 100 -13.6 -3.82592 | opp_overlap 553775, overlap 553768 553775 ACAATTTGAGAATAA TAAAGGCAGAAG ATAC CCTCTGCCTTTA TTAGAAAACTACAGT TERM 760 553794 - 553775 - GR 91 -10 -4.51812 | opp_overlap 553775, overlap 553771 553768 TTTGAGAATAATAAA GGCAGAAG ATAC CCTCTGCC TTTATTAGAAAACTA TERM 761 553775 - 553794 + gr 77 -7.8 -4.1552 | opp_overlap 553775 553771 553768 TTTGAGAATAATAAA GGCAGAAG ATAC CCTCTGCC TTTATTAGAAAACTA ftsH 555735 - 553807 - | cell division protein rrmJ 556435 - 555809 - | 23S rRNA methyltransferase J TERM 762 556180 - 556158 - G 71 -4 -5.00616 | opp_overlap 556163, overlap 556159 556160 TCGCCCTGCAAAAAA TCGACCCCGA CAA TCGGGTTCAT ATCCAAAATATCACA TERM 763 556163 - 556175 + g 70 -9.1 -3.2614 | opp_overlap 556160 556159 556158 CTGCAAAAAATCGAC CCCGA CAA TCGGG TTCATATCCAAAATA TERM 764 556775 - 556765 - g 71 -6.8 -4.07675 | GCAAAAGCAATGAAA GCAC AAG GTGC AGAATTAGCCTTTAC TERM 765 556906 - 556896 - g 71 -6.8 -4.04209 | TGAAAGCATCACAAA CTGC TTT GCAG AATTAAGCAAAAAAT TERM 766 557304 - 557294 - g 75 -5.4 -4.70613 | overlap 557283 AAAACTTCAAGAAAA TGCT TGC AGCA TTCGAACAAACTGCC fabI 556678 - 557466 + | enoyl-[acyl-carrier-protein] reductase (NADH) TERM 767 557503 - 557519 + F 88 -7.9 -4.81249 | opp_overlap 557503 TCATCTACGAATAAG GGCGGGG TTT TCCTGCC TTTTTACCTTTAAGA fic 557546 - 558208 + | filamentation induced by cAMP protein Fic HAPS_0514 558562 - 558266 - | predicted helix-turn-helix containing protein HAPS_0515 558909 - 558565 - | hypothetical protein TERM 768 559078 - 559096 + H 91 -5.9 -5.69262 | opp_overlap 559056 559055 559078, overlap 559056 559079 AATTTTCCAATTATA TCGGTGC ATTAC GCACCGC TTTTTATTTTTATCA TERM 769 559079 - 559095 + H 83 -9.4 -3.99117 | opp_overlap 559056 559055 559078, overlap 559056 559078 ATTTTCCAATTATAT CGGTGC ATTAC GCACCG CTTTTTATTTTTATC TERM 770 559536 - 559546 + G 76 -3.2 -5.33405 | opp_overlap 559524 AAACACACCCTCTGC GTGA TGA TCGC TTTTTCTTTGCTCAA TERM 771 560332 - 560344 + G 84 -7.7 -4.67755 | opp_overlap 560331 GATTATTGCCAACAT CTGTG CCG CACAG TTTTTAGATAAATAT rnb 559124 - 561103 + | exoribonuclease II TERM 772 561329 - 561319 - g 74 -4 -5.06472 | opp_overlap 561319 ACAGAAATAACAAAA TTAG GAG CTAA ATTTCACCAACGTAA mltA 561214 - 562305 + | murein transglycosylase A TERM 773 562434 - 562398 - f 100 -13.9 -4.57341 | opp_overlap 562398 AAGTGTTGGTAAAAA GTGGGCTAAAGCCTTAT AGT ACAAGGCTTTAACTCAC TTTTTGAAATATGAA TERM 774 562398 - 562434 + F 95 -11.7 -4.64766 | opp_overlap 562398 AAGTGTTGGTAAAAA GTGGGCTAAAGCCTTAT AGT ACAAGGCTTTAACTCAC TTTTTGAAATATGAA TERM 775 563088 - 563075 - g 76 -2.4 -5.51046 | TAAATATAGAAAAAA CAAC AAATAG GTTG GAAGGGTTATTTAAA HAPS_0518 562780 - 563196 + | hypothetical protein TERM 776 563275 - 563245 - T 95 -12.8 -3.62096 | overlap 563248 GTCTACTATGCCAAA CAATGCCATTGTTA AAA TAACAACGACATTG AGCATGAAATTCTAA TERM 777 563272 - 563248 - T 80 -8.7 -3.94634 | overlap 563245 TACTATGCCAAACAA TGCCATTGTTA AAA TAACAACGACA TTGAGCATGAAATTC TERM 778 564481 - 564498 + T 71 -6.9 -3.97947 | overlap 564473 CACCCCTAGGCCCTG CTGGACC CGCA GGACCAG TTTCTCCTCGGTCAC TERM 779 564600 - 564622 + T 95 -14.2 -2.74563 | overlap 564591 564589 CCTTTTGGACCTTGT GGTCCTGTTG CTC CAGCAGGACC TGCTTCGCCTCTAGG HAPS_0520 567102 - 566989 - | hypothetical protein TERM 780 567258 - 567295 + r 95 -11.5 -4.57341 | gap 1, opp_overlap 567258 TTCATATTTCAAAAA GTGAGCTTAAAGCCTTGT GCT ATAAGGCTTT-AGCCCAC TTTTTACCAACACTT TERM 781 567295 - 567258 - R 95 -11.5 -4.64766 | gap 1, opp_overlap 567258 TTCATATTTCAAAAA GTGAGCTTAAAGCCTTGT GCT ATAAGGCTTTA-GCCCAC TTTTTACCAACACTT TERM 782 567367 - 567348 - R 78 -3.6 -5.30575 | opp_overlap 567340, overlap 567340 GAAAAACTCAAAAAA TTGATGTA ATCT TACAGCAA CAAAAATAAGTGTTA TERM 783 567421 - 567437 + r 100 -10.1 -5.9667 | TTTGCTTTCCGAGTA GCCCCTG TTA TAGGGGC TTTTTTTATGTTTTT dedA 568048 - 567452 - | DedA family integral membrane protein, SNARE associated Golgi protein TERM 784 567662 - 567644 - G 71 -6 -4.24075 | opp_overlap 567643, overlap 567638 567645 ATCCACTAACACAAA GCGAGTAA AGG TTACTCGG CGTGTGATACCCGAA TERM 785 567661 - 567645 - G 73 -9.5 -3.13722 | opp_overlap 567643, overlap 567644 567638 TCCACTAACACAAAG CGAGTAA AGG TTACTCG GCGTGTGATACCCGA purR 569081 - 568059 - | DNA-binding transcriptional repressor PurR prmC 570139 - 569195 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 786 569641 - 569656 + g 71 -7.6 -3.85698 | opp_overlap 569641 GATCAACTGCATCAA TTTCCG CATT CGGAAA TTTGTCGGCACAAGC HAPS_0524 570226 - 570756 + | hypothetical protein tyrP 572115 - 570898 - | tyrosine-specific transport protein/HAAAP family hydroxy/aromatic amino acid permease TERM 787 572200 - 572212 + r 83 -6.3 -5.1861 | opp_overlap 572199 572200 ATGTAAAAAAATAAT TACAC TCA GTGTA TTTTTTCATAATGCA tyrP 573417 - 572263 - | tyrosine-specific transport protein/amino acid permease TERM 788 573838 - 573855 + r 84 -4.9 -5.32944 | gap 1, opp_overlap 573838 GGCTGGGAAGATAAC TG-GGCAA ATA TTGCCACA TTTTTTGATTATCCG TERM 789 574077 - 574100 + r 71 -8.9 -3.18274 | ATTTATGATTGATTT TGGTGATCG CTTAGA CGATCACCG TTAAGTTGAAATGGG TERM 790 574267 - 574218 - R 80 -2.4 -5.626 | gap 1, opp_overlap 574218 574222, overlap 574222 TAGCTTATAAAAAAA TAAACCTAACCTAACGGTTCA TTTTATATT TGATC-GTTAGATTAGGTTTT ATTTTTTATTTTGAG TERM 791 574218 - 574268 + r 83 -2.1 -5.80951 | gap 1, opp_overlap 574218 574222, overlap 574222 TAGCTTATAAAAAAA T-AAACCTAACCTAACGGTTCATT TTAT ATTTGATCGTTAGATTAGGTTTTA TTTTTTATTTTGAGT TERM 792 574222 - 574263 + r 84 -4.5 -5.58051 | opp_overlap 574222 574218, overlap 574218 TTATAAAAAAATAAA CCTAACCTAACGGTTCATT TTAT ATTTGATCGTTAGATTAGG TTTTATTTTTTATTT TERM 793 574263 - 574222 - R 76 -3.2 -5.27709 | gap 1, opp_overlap 574218 574222, overlap 574218 TTATAAAAAAATAAA CCTAACCTAACGGTTCA TTTTATATT TGATC-GTTAGATTAGG TTTTATTTTTTATTT purL 574752 - 574273 - | phosphoribosylformylglycinamidine synthase ccdA 575420 - 574770 - | cytochrome c-type biogenesis protein ccdA TERM 794 575081 - 575068 - G 81 -6.7 -4.71234 | opp_overlap 575067 AAACCCAATACAAAA GCTTC TACA GAAGC ACTTTTACCATTTGT msrA 576492 - 575422 - | bifunctional methionine sulfoxide reductase msrA/msrB TERM 795 575977 - 576002 + g 71 -4.1 -4.88684 | TGCTAAGATGTAATG TTTAAGTGG TTCAACTT CCACTTGAA TTTTGTCTTTATATT HAPS_0531 576925 - 576596 - | hypothetical protein TERM 796 576760 - 576770 + g 90 -4 -6.02546 | TCATATCATCAGACT TCAT CAT ATGA TTTTTTTTCATTTCA rpoE 577169 - 577639 + | RNA polymerase sigma-70 factor HAPS_0533 577636 - 577821 + | hypothetical protein TERM 797 579947 - 579937 - g 89 -6.8 -5.33405 | TTTAGTAAAGAAAAA GCTG ACA CAGC CCAACATAAAGCCGA HAPS_0536 579397 - 580212 + | phage capsid scaffolding protein TERM 798 580287 - 580303 + F 71 -5.1 -4.59773 | AGCACAAGACAACGG TGTGGAT TAC AACCACA TTTTTACGGGTAAAA TERM 799 580500 - 580462 - g 73 -9.7 -3.1505 | gap 1 ACTATTTGCGAGTAA CT-GCGGAGCTTGCTCAA TCTT CTGAGCAAGCTCAACTAG AAAACCTCGACGAAT HAPS_0538 580428 - 581081 + | phage small terminase subunit HAPS_0540 581237 - 581761 + | phage-related lysozyme TERM 800 581786 - 581809 + G 71 -9.6 -2.83345 | opp_overlap 581791, overlap 581783 TTGAGAAAAGTTTTG GCAAAGCGAT GATT ATCGCCTTGC TGATTGGTGTCTGCA HAPS_0541 581746 - 582213 + | hypothetical bacteriophage protein TERM 801 582352 - 582367 + F 73 -5.4 -4.56597 | GACAGAGAGCTTTGT CTTAGG ATTG CCTGAG TTTTTAAACAGCAGA HAPS_0542 582396 - 582914 + | possible Lhr family helicase, phage associatd TERM 802 583010 - 583027 + F 100 -12.7 -5.06414 | opp_overlap 583000 AAAACTAACTCCACA GCCCCGA CCCA TCGGGGC TTTTTGTTACCCCCA dnaK 583120 - 583338 + | DnaK suppressor protein/ C4-type zinc finger protein, DksA/TraR family gpR 583335 - 583769 + | bacteriophage P2 Tail completion protein GPR gpS 583810 - 584271 + | bacteriophage tail completion protein gpS-like protein/phage virion morphogenesis protein TERM 803 584289 - 584275 - T 100 -11.4 -4.82667 | opp_overlap 584269 GCAGGACAGTAAAAA GGCGGT TAG ACCGCC TTAGAAATTATATTT HAPS_0546 584552 - 584367 - | hypothetical protein TERM 804 584890 - 584877 - g 70 -3.1 -4.95854 | overlap 584871 584879 CAAAAAATGCAAAAA GCCTT TGAA AAAGC TCGTAATGCGGTAAA gpT 584682 - 587423 + | bacteriophage P2 tail protein GPT; putative tail length determinator TERM 805 587491 - 587474 - f 73 -6.9 -4.14739 | opp_overlap 587475, overlap 587475 TGACCCAGTTGAAAA GCCCCGA ACAA TCGGGGT TTTTACTTGCAGAAT TERM 806 587490 - 587475 - f 78 -10.4 -3.08522 | opp_overlap 587475, overlap 587474 GACCCAGTTGAAAAG CCCCGA ACAA TCGGGG TTTTTACTTGCAGAA TERM 807 587475 - 587490 + F 100 -10.4 -4.8622 | opp_overlap 587475 587474 GACCCAGTTGAAAAG CCCCGA ACAA TCGGGG TTTTTACTTGCAGAA TERM 808 587946 - 587956 + G 70 -5.4 -4.31329 | opp_overlap 587946 AAAGACTATATGAAC GAAG TCG CTTC TTTTAACCTTTTTAC HAPS_0548 587550 - 588092 + | hypothetical protein HAPS_0549 588085 - 588507 + | hypothetical protein TERM 809 588527 - 588508 - f 75 -9.2 -3.11619 | opp_overlap 588509 CAACAACTCATTTAA CGCCCCGA CCCA TCGGGGCT TTTTGTTACCCCCAA TERM 810 588509 - 588526 + F 100 -12.7 -5.06414 | opp_overlap 588508 AACAACTCATTTAAC GCCCCGA CCCA TCGGGGC TTTTTGTTACCCCCA HAPS_0550 588682 - 588801 + | hypothetical protein TERM 811 588878 - 588858 - f 100 -8.4 -5.18371 | opp_overlap 588858 TTTTATAAAATAAAA GCAGAAAT GGGAA ATTTCTGC TTTAGGGAAAATGGT TERM 812 588858 - 588878 + F 72 -8.4 -3.5393 | opp_overlap 588858 TTTTATAAAATAAAA GCAGAAAT GGGAA ATTTCTGC TTTAGGGAAAATGGT TERM 813 588935 - 588970 + F 83 -7.1 -4.77165 | gap 1, opp_overlap 588935 CACAATTTGTGTAAA TACCTGTTTCTGAGAT AATAC AT-TCAGACACAGGTA TTTTATTATGAACGA TERM 814 589331 - 589348 + F 84 -4.9 -5.32944 | gap 1, opp_overlap 589331 GGCTGGGAAGATAAC TG-GGCAA ATA TTGCCACA TTTTTTGATTATCCG TERM 815 589570 - 589593 + F 71 -8.9 -3.18274 | ATTTATGATTGATTT TGGTGATCG CCTAGA CGATCACCG TTAAGTTGAAATGGG TERM 816 590078 - 590055 - f 100 -11 -5.08088 | AACCCCCAACAAAAA GCCCCAAGCA TTTC TGCTCAGGGC TACAAAATCATTTTG TERM 817 590356 - 590331 - g 95 -11.9 -4.19817 | GTTAGGCACGGAAAA GGCGATCACCA AATA TGGCAATCGCC GATTACAGGAAAGCG ycfA 590265 - 590450 + | YcfA family protein, predicted periplasmic or secreted lipoprotein TERM 818 590459 - 590433 - f 100 -12.3 -5.14563 | CGTTCCATCAAAAAA TCGGCAGGGCT TTTAT AGCTCTGCCGA GCTTAGCAAAGGAGA HAPS_0553 590480 - 590917 + | hypothetical protein TERM 819 590941 - 590922 - T 77 -10.8 -2.53759 | AACAGGTTTAATGGA TAGGCGTA GCAA TACGCCTA AAACTTCAATCTAAT HAPS_0554 591316 - 590939 - | putative phage anti-termination protein Q ninG 591882 - 591313 - | NinG recombination protein/bacteriophage lambda NinG family protein ninB 592476 - 592027 - | putative recombination protein NinB HAPS_0557 593382 - 592711 - | possible bacteriophage replication protein P TERM 820 592834 - 592857 + g 80 -4.6 -5.23316 | gap 1, overlap 592835 592856 TTCCCCTGTTTTTAA CCGCTTGCTCA TTT TGA-CAAGCGA TTTTTTAATCTCATC TERM 821 592835 - 592856 + g 70 -8.1 -3.72905 | gap 1, overlap 592834 TCCCCTGTTTTTAAC CGCTTGCTCA TTT TGA-CAAGCG ATTTTTTAATCTCAT HAPS_0558 594212 - 593382 - | putative phage DNA replication protein O TERM 822 593741 - 593760 + g 88 -10.8 -4.03167 | overlap 593748 TCTCGCGCGCGTTTA TACTTCCC GTCA GGGAAGTA TTATTGTTAGTATTC TERM 823 593817 - 593847 + g 70 -8.3 -3.27029 | overlap 593816 TGGCGGTTTTGCTTC TTCCCGAATGTCG CTTTC CGCCATTGGGGAA TGTTCATTAGTGGCA TERM 824 594042 - 594058 + g 77 -6.5 -4.53303 | overlap 594044 TAATCCCGTTTCCTG CTCAAGC TCA GCTTGTG TTTTATATACGCCTA TERM 825 594044 - 594056 + g 73 -7.7 -3.87627 | overlap 594042 ATCCCGTTTCCTGCT CAAGC TCA GCTTG TGTTTTATATACGCC HAPS_0559 594991 - 594209 - | prophage antirepressor, Putative DNA-binding protein (Roi) TERM 826 594954 - 594971 + g 93 -9.1 -5.27938 | ATTATTTCCCCATTA CCCACGT TGCA GCGTGGG TTTTTATTTGCCAAT HAPS_0560 595477 - 595271 - | prophage LambdaSo, Cro/CI family transcriptional regulator/ possible Cro repressor TERM 827 595558 - 595538 - H 83 -7 -4.84529 | opp_overlap 595531 595538 595552 TTATAAAGTCAAAAA CAAAATAC TTTTT GTATTTTG AATATTTAATACGGT HAPS_0561 595739 - 596266 + | putative prophage repressor CI, XRE family transcriptional regulator/SOS-response transcriptional repressors (RecA-mediated autopeptidases)/ LexA family repressor/S24 family protease HAPS_0562 596299 - 596733 + | hypothetical protein HAPS_0563 596726 - 597202 + | hypothetical protein TERM 828 597208 - 597223 + F 93 -7.5 -5.23292 | opp_overlap 597208 TAAAAATTAACATAA CCGCC CACCGT GGCGG TTTTCTTTTATCTCC TERM 829 597223 - 597208 - f 74 -7.5 -3.85785 | opp_overlap 597208 TAAAAATTAACATAA CCGCC CACCGT GGCGG TTTTCTTTTATCTCC TERM 830 597266 - 597249 - f 85 -2.7 -5.93809 | overlap 597251 597260 TCTCCACAAAAAAAA CACAACA AAAA TGTTGCA AAAACAACAAAAATG TERM 831 597264 - 597251 - f 73 -5.3 -4.62054 | overlap 597249 597260 TCCACAAAAAAAACA CAACA AAAA TGTTG CAAAAACAACAAAAA TERM 832 597275 - 597260 - f 78 -4 -5.35365 | opp_overlap 597269 597271, overlap 597251 597249 597271 AAAACACAACAAAAA TGTTGC AAAA ACAACA AAAATGTTGTATTAT TERM 833 597284 - 597271 - f 73 -5.3 -4.61527 | opp_overlap 597271 597269, overlap 597260 AAAATGTTGCAAAAA CAACA AAAA TGTTG TATTATATCTTTGCT ycfA 597320 - 597502 + | YcfA family protein, unknow function TERM 834 597510 - 597485 - f 77 -2.6 -5.52347 | opp_overlap 597508, overlap 597508 AATAAAATTAAAAAA GACTTAGATC TTAAGT AATCAAAGTC CCTCGAAAGAGGGGC TERM 835 597525 - 597508 - f 73 -6.9 -4.00348 | opp_overlap 597508, overlap 597485 TCTTAAGTAATCAAA GTCCCTC GAAA GAGGGGC TTTTCTAGGAGATAT TERM 836 597508 - 597525 + F 90 -9.1 -4.38154 | opp_overlap 597485 597508 TCTTAAGTAATCAAA GTCCCTC GAAA GAGGGGC TTTTCTAGGAGATAT HAPS_0565 597542 - 597961 + | putative bacteriophage protein, putative transcription regulator, cro/C1-type DNA-binding domain TERM 837 597970 - 597985 + F 100 -10.4 -4.72272 | opp_overlap 597982 CCACTAGCCCATTTA GCCCTC AACT GAGGGC TTTTTACTGCCCAAA TERM 838 598176 - 598186 + F 81 -4 -5.4505 | opp_overlap 598176 AATCAATCAATTAAA TACA TTT TGTA TTTTTTATTGCGAAA HAPS_0566 598384 - 598539 + | hypothetical protein TERM 839 598554 - 598569 + F 78 -10.4 -3.0701 | opp_overlap 598554, overlap 598543 GGAATTTTTATCAAA GCCCTG TGTA CAGGGC TTGAGTAAAGGTTCT TERM 840 598569 - 598554 - f 86 -10.4 -3.74747 | opp_overlap 598543 598554 GGAATTTTTATCAAA GCCCTG TGTA CAGGGC TTGAGTAAAGGTTCT HAPS_0567 598817 - 599104 + | hypothetical protein TERM 841 599128 - 599101 - T 71 -9.2 -2.55999 | overlap 599106 GGAGTTGATACGAAT TTAAAGCCCTGC TCTA ACAGGGCTTGAA CACTAAACTTCATAA TERM 842 599123 - 599106 - T 78 -9.1 -3.79787 | overlap 599101 TGATACGAATTTAAA GCCCTGC TCTA ACAGGGC TTGAACACTAAACTT HAPS_0568 599301 - 599131 - | hypothetical protein orfG 599316 - 599537 + | orfG, econed on plasmid pRF1 HAPS_0570 599802 - 599674 - | hypothetical protein HAPS_0571 599879 - 600520 + | hypothetical protein HAPS_0572 600597 - 600725 + | hypothetical protein TERM 843 601407 - 601373 - g 78 -3.7 -5.27923 | gap 1, opp_overlap 601378, overlap 601376 601378 CAACCTTACAAAAAA GAATAGAGAAATCACC TATT GATGATTACTCT-CTC GTTGCTGTTCAATTT TERM 844 601405 - 601376 - g 72 -4.3 -4.72201 | opp_overlap 601378, overlap 601373 601378 CCTTACAAAAAAGAA TAGAGAAATCACC TATT GATGATTACTCTC TCGTTGCTGTTCAAT HAPS_0573 600730 - 601443 + | protein serine/threonine phosphatase, protein phosphatase 2C-like protein TERM 845 601514 - 601527 + F 73 -2.3 -5.28176 | overlap 601510 AGTCGGTTACTCGCT CCGAT ACAA AGCGG TTTTTTATGCCTAAA TERM 846 601552 - 601567 + F 72 -7.6 -3.68529 | CCTAAAATTTGTAAT TCCTCA GATC TGAGGA TTTCAGTGGTCGGGT HAPS_0575 601989 - 602309 + | hypothetical protein HAPS_0576 602306 - 602845 + | hypothetical protein TERM 847 602953 - 602932 - g 71 -7.3 -3.88618 | opp_overlap 602931 602932, overlap 602924 AATATAACGATGAAA TCGTCCC TGATGAAT GGGACGA GTTTTGCGAAGAAGT HAPS_0577 602832 - 603038 + | hypothetical protein TERM 848 603350 - 603328 - g 73 -5.6 -4.55826 | GGTAAAAGATGAAAA CGGTGACT GGATAAA AATCACCG AAGCTCAATTCCAAC TERM 849 603779 - 603766 - g 76 -4.5 -5.00884 | AGCGGTGGTAAAAAA CGCTG AAAC CAACG AATTTACCTACCCTG HAPS_0578 603035 - 603973 + | phage recombinase, recombinational DNA repair protein, RecE pathway TERM 850 604321 - 604299 - g 87 -8.4 -4.58076 | opp_overlap 604299 604298 604296 AGAACGCAGAGAAAA CGCATTCATC ACA GGCGAATGCG ATATTTACGTTCCAT HAPS_0579 604027 - 604695 + | hypothetical protein ssb 604695 - 605174 + | single-stranded DNA binding protein TERM 851 605185 - 605204 + T 90 -10.7 -4.25104 | opp_overlap 605185 TTTGAATTTAATTAA CGCCCTC TATTTT GAGGGCG TTTTAATAAAGGGCA TERM 852 605204 - 605185 - T 80 -10.7 -3.4052 | opp_overlap 605185 TTTGAATTTAATTAA CGCCCTC TATTTT GAGGGCG TTTTAATAAAGGGCA TERM 853 605227 - 605215 - T 73 -6.9 -4.15044 | opp_overlap 605214 605215 GGGCGTTTTAATAAA GGGCA TTA CGCCC CTTTCTGCGATTGCT HAPS_0581 605408 - 605220 - | hypothetical protein TERM 854 605459 - 605438 - H 84 -10.9 -3.62775 | opp_overlap 605438 ATTAGTTTTGAAGAA CGAGAGAGA TTTC TCCCTCTCG TTAAATTATCATCAA TERM 855 605438 - 605459 + H 71 -8.7 -3.25072 | opp_overlap 605438 ATTAGTTTTGAAGAA CGAGAGAGA TTTC TCCCTCTCG TTAAATTATCATCAA TERM 856 605658 - 605677 + H 100 -10 -5.4505 | opp_overlap 605658 GCATTATTTCACTAA GCCATCGT TTTT ACGGTGGC TTTTTTATTGCAACA TERM 857 605730 - 605709 - H 78 -8.7 -3.71672 | opp_overlap 605709, overlap 605705 TTTCACGAAAACCAA CCGCTTGTA GCAA TACAGGCGG TTTTTTATTGCGAGG TERM 858 605709 - 605730 + H 100 -10.9 -5.4505 | opp_overlap 605705 605709 TTTCACGAAAACCAA CCGCTTGTA GCAA TACAGGCGG TTTTTTATTGCGAGG HAPS_0582 605755 - 606672 + | intrrupted gp229, phage associated TERM 859 606759 - 606774 + G 76 -9 -3.65046 | opp_overlap 606750 GTAACACTCTGCTCA CGGCAA GCCC TTGCCG TTATTCGAGTAAACG HAPS_0583 606696 - 606959 + | hypothetical protein TERM 860 607110 - 607098 - T 81 -6.9 -4.62669 | opp_overlap 607097 607098 TAATGAAAGAATAAA GGGCA TTA CGCCC CTTTTTGATTAAATA HAPS_0584 607321 - 607103 - | hypothetical protein TERM 861 607500 - 607517 + r 83 -9.1 -4.20868 | TAGCTCCATTTAGTG GCCCAGT GAAA GCTGGGC TTCTTATTTTCAGAA TERM 862 607733 - 607717 - R 85 -10.1 -3.89822 | opp_overlap 607708 TATTTATTGGATAAA GCCTCCA AAA CGGAGGC TATCCACTCTCATTT HAPS_0585 608044 - 607748 - | hypothetical protein HAPS_0586 609130 - 608153 - | hypothetical protein HAPS_0587 614070 - 609187 - | phage tail protein/putative Fels-1 prophage host specificity protein TERM 863 610506 - 610539 + g 76 -11.1 -2.61681 | opp_overlap 610504 610515, overlap 610505 610509 CTGCCGTACCCAAGC GTGAAGTCAGACCAA CCAG TTGGTCTGACTGTGC CTTATCCACTTGCGC TERM 864 610509 - 610536 + g 79 -11.4 -2.60555 | opp_overlap 610504 610515, overlap 610506 610505 CCGTACCCAAGCGTG AAGTCAGACCAA CCAG TTGGTCTGACTG TGCCTTATCCACTTG TERM 865 614114 - 614091 - R 100 -15.4 -5.4505 | opp_overlap 614089 614084 TTCTCCAATAAAAAA GCCGTTACAG TTTC CTGTAACGGC GGTTAAATTTCAGGT TERM 866 614131 - 614177 + r 86 -8.2 -4.51994 | gap 2, opp_overlap 614139 614140 GTTAAATTTCAGGTA CGACAAA-AG-CCACTTGCAAC GCTAG GTCGCAAGCGGTCTGTTTGTCG TTTATTGTTGCTTAA TERM 867 614167 - 614139 - R 79 -7.4 -4.4767 | opp_overlap 614131, overlap 614140 TCAGGTACGACAAAA GCCACTTGCAAC GCTAG GTCGCAAGCGGT CTGTTTGTCGTTTAT TERM 868 614166 - 614140 - R 80 -10.9 -3.2812 | opp_overlap 614131, overlap 614139 CAGGTACGACAAAAG CCACTTGCAAC GCTAG GTCGCAAGCGG TCTGTTTGTCGTTTA HAPS_0588 615034 - 614189 - | putative antirepressor protein HAPS_0589 615483 - 615298 - | hypothetical protein TERM 869 615557 - 615591 + r 100 -15.2 -5.72616 | opp_overlap 615562 GGAAAGTTGGGAATA AAAAACCCCGAACATT GCG AGTGTTCGGGGTTTTG TTTTTTTATGTACCT TERM 870 615586 - 615562 - R 100 -12.9 -5.4505 | opp_overlap 615557 GTTGGGAATAAAAAA CCCCGAACATT GCG AGTGTTCGGGG TTTTGTTTTTTTATG HAPS_0590 616115 - 615597 - | bacteriophage lambda tail assembly I HAPS_0591 616897 - 616145 - | phage-related tail assembly protein K, PAD1/JAB1 superfamily metal-dependent protease TERM 871 616852 - 616836 - G 71 -5.1 -4.64846 | opp_overlap 616836, overlap 616831 TTAGAAACGACAAAA CCGCA ACTTTCG TGCGG TTCTGAGCGTTTGGC HAPS_0592 617636 - 616899 - | phage-related minor tail protein L TERM 872 617595 - 617611 + g 76 -4.4 -5.0538 | ATTTTGTTCAAGTTT TGGCAG TTCGT TTGCCA TTTTTTGGGGTAGGG HAPS_0593 617968 - 617636 - | predicted phage minor tail protein TERM 873 617988 - 618012 + r 91 -11.6 -3.76232 | opp_overlap 617988 CACCTTATAATAAAA TACCCTTAGA AACTC TCTAAGGGTA TTATCTATTTAACGC TERM 874 618012 - 617988 - R 100 -12.3 -4.78237 | opp_overlap 617988 CACCTTATAATAAAA TACCCTTAGAA ACT CTCTAAGGGTA TTATCTATTTAACGC HAPS_0594 621387 - 618013 - | phage-related minor tail protein TERM 875 620319 - 620336 + g 70 -7.7 -3.66908 | opp_overlap 620291, overlap 620291 CCATTTCAACTTGTG CGGCTGT TCGC ATAGCCG TTGCTTTTGCAAGAA TERM 876 621407 - 621423 + r 78 -7.9 -4.24623 | opp_overlap 621407 TCTCCAATAAAAAAA GCCCGCA TAT TGCGAGC TTTCTATCTATTTAA TERM 877 621423 - 621407 - R 100 -10.1 -5.7946 | opp_overlap 621407 TCTCCAATAAAAAAA GCCCGCA TAT TGCGAGC TTTCTATCTATTTAA HAPS_0595 621718 - 621443 - | hypothetical protein TERM 878 621675 - 621658 - G 70 -2.7 -5.05116 | overlap 621661 621669 TGACAAAGAATAAAA CAATTAC TGAA GTAAATG CTCTACCTAACCACA TERM 879 621772 - 621752 - R 70 -5.5 -4.4009 | TCTTACTGTACAAAA TTATTGCAT TTA AAGCAATAA AAAATAGTCACATTT TERM 880 621897 - 621880 - R 100 -9.1 -5.24129 | TTCTCCCATAAAAAA GCCACCC TTAA AGGTGGC TTAAAATTTCCATTT HAPS_0596 622186 - 621920 - | hypothetical protein relE 622539 - 622270 - | addiction module antitoxin/putative RelE toxin-like protein, plasmid stabilization system relB 622809 - 622543 - | RelB, addiction module antitoxin/DNA-damage-inducible protein J, negative regulator of translation TERM 881 622713 - 622733 + g 74 -4.7 -4.91712 | GCATATTAAACACTT GTGATGGAG TCA TTCCATAAC TTTTTATCACTTCAA HAPS_0599 623105 - 622878 - | phage protein HAPS_0600 623551 - 623150 - | phage protein TERM 882 623600 - 623579 - R 100 -10.9 -5.65927 | opp_overlap 623579 TATTGAAATAAAAAA CCGCCTGTA TTAC TACAAGCGG TCAGTTATCGCCAAT HAPS_0601 624290 - 623625 - | phage protein TERM 883 624084 - 624098 + g 70 -7.8 -3.74872 | GATAACCCCAGGTGA GCCGTT ATC GACGGC TTTAATCGGATAAGT HAPS_0602 624712 - 624293 - | putative tail component of prophage CP-933K HAPS_0603 625245 - 624712 - | putative phage tail component TERM 884 625106 - 625122 + g 82 -8.7 -4.21768 | overlap 625098 ACGCCAATCTGTTGA GCCACAG ACT TTGTGGC TTTTCGCATTGCTTG HAPS_0604 625551 - 625249 - | possible bacteriophage tail protein TERM 885 625419 - 625440 + g 73 -9.5 -3.22298 | gap 1, opp_overlap 625414 625413 CGTCCGAAACGTGAA GCCCCTCCAT AAT AT-GAGGGGC TTCGTCATAGGTAGC HAPS_0605 625870 - 625544 - | putative RecA/RadA recombinase TERM 886 625803 - 625818 + g 72 -3.2 -5.05577 | opp_overlap 625803 GTCACGACTAATTCA CCGC CTTTGACT GCGG TTTTTGCTTTAATTT HAPS_0606 627905 - 625938 - | Clp protease-like protein TERM 887 626455 - 626465 + g 70 -5.4 -4.3534 | opp_overlap 626455 626453 GCAAAAATCAAATTA GCAA TGG TTGC TTTTGCTGCTTGACC TERM 888 627282 - 627310 + g 74 -5.3 -4.78764 | overlap 627283 627284 CGGTTCTACTGTTGT TTTTGCTTGGGCT TTT GGCTCAAGTAAGG TTTTTAATGCATTTG TERM 889 627471 - 627484 + g 74 -3.7 -5.03314 | overlap 627472 TTCTGCTAATTCTTC AGGGG ATTT CCCCG TTTTTTCCGCATACG TERM 890 627693 - 627662 - G 76 -10.9 -2.72739 | opp_overlap 627668, overlap 627661 CTGAAGCCATAGAAG CGGCAAGACCGTC AATATA GACGGTCTTACTG GCTGGGTGATTTTTT TERM 891 627668 - 627687 + g 70 -9.3 -3.18912 | opp_overlap 627662 627661 CCATAGAAGCGGCAA GACCGTC AATATA GACGGTC TTACTGGCTGGGTGA TERM 892 627758 - 627740 - G 80 -11 -3.38201 | overlap 627738 CAATACCGTCAAACA CACTCCCC CCT GGGGAATG AATATGTAAATCAAT TERM 893 627944 - 627925 - R 100 -7.8 -5.4505 | opp_overlap 627925 TCCTCCAATAAAAAA CCCGACTA TTTA TCGTCGGG TTCTTCTGTCTTTTC TERM 894 627925 - 627944 + r 76 -7.8 -4.02733 | opp_overlap 627925 TCCTCCAATAAAAAA CCCGACTA TTTA TCGTCGGG TTCTTCTGTCTTTTC HAPS_0607 629429 - 627930 - | bacteriophage capsid protein HAPS_0608 629651 - 629430 - | hypothetical protein HAPS_0609 631789 - 629669 - | bacteriophage tail assembly protein/phage terminase large subunit HAPS_0610 632301 - 631789 - | unknown phage protein TERM 895 632308 - 632292 - G 85 -2.9 -5.79595 | overlap 632294 GCTTAAAACAAAAAA TTGCACC CAA AGTGCGA AATTAAAATGAAAGA HAPS_0611 632787 - 632341 - | putative lytic protein Rz1, bacteriophage protein TERM 896 632545 - 632526 - GR 100 -10 -5.23292 | opp_overlap 632526 632528 TTACATAAAATAAAA GAGCGATC ATCT GACCGCTC TCTATCGTGACATCA HAPS_0612 633067 - 632750 - | hypothetical bacteriophage protein HAPS_0613 633612 - 633067 - | glycoside hydrolase family protein/phage lysozyme HAPS_0614 633862 - 633587 - | hypothetical protein TERM 897 633914 - 633893 - H 100 -8.7 -5.4833 | opp_overlap 633893 TCAGGCAATAAAAAA GCCCAGTCC GTAA AGACTGAGC TTGGTTAAAAAAACT TERM 898 633964 - 633928 - H 81 -4.6 -5.40072 | gap 1 GCTTGGTTAAAAAAA CTGCTAGAATA-TTGTT CCCC AACAAATAAACTAGCAG AGGATTAAATTATGT HAPS_0615 633976 - 634539 + | hypothetical protein TERM 899 634698 - 634675 - g 95 -8.8 -5.45802 | CCCTTAAAACAAAAA GCCCCGACCG TTTC CGATCAGGAC TACAAAATCATTTTG HAPS_0616 634629 - 634745 + | hypothetical protein TERM 900 634854 - 634881 + T 70 -2.8 -5.07486 | gap 1, overlap 634840 634855 TGGCAATTTTCTTTT TGCCGTT-TATCA TCT TCATAAAACGGCG TTTTTCTTGCCACTC HAPS_0617 635007 - 634831 - | hypothetical protein TERM 901 635129 - 635112 - H 81 -9.1 -4.08557 | GGGCGGAAATAAGAA GAGCGGC TTTC ACCGCTC AACTAAATATAGGAA TERM 902 635255 - 635225 - H 76 -7.6 -4.14541 | gap 1, opp_overlap 635226 635247, overlap 635226 TACTAATCAGATAAA GTCCTAGCGGTGG TTGCCC CCACTGCTAGG-C AGTTCCTAAACTATA HAPS_0618 635304 - 635522 + | hypothetical protein TERM 903 635534 - 635513 - T 74 -9.5 -3.0464 | AATTTATCGGCAACA TCAGGCGTA GCAA TACGCCTAA AACTTCAATCTAATC HAPS_0619 635908 - 635531 - | putative anti-termination protein Q, phage associated ninG 636474 - 635905 - | NinG recombination protein/bacteriophage lambda NinG family protein ninB 637068 - 636619 - | putative recombination protein NinB HAPS_0622 637974 - 637303 - | replication protein P/possible bacteriophage replication protein TERM 904 637426 - 637449 + g 80 -4.6 -5.23316 | gap 1, overlap 637427 637448 TTCCCCTGTTTTTAA CCGCTTGCTCA TTT TGA-CAAGCGA TTTTTTAATCTCATC TERM 905 637427 - 637448 + g 70 -8.1 -3.72905 | gap 1, overlap 637426 TCCCCTGTTTTTAAC CGCTTGCTCA TTT TGA-CAAGCG ATTTTTTAATCTCAT HAPS_0623 638804 - 637974 - | putative phage DNA replication protein O TERM 906 638333 - 638352 + g 88 -10.8 -4.03167 | overlap 638340 TCTCGCGCGCGTTTA TACTTCCC GTCA GGGAAGTA TTATTGTTAGTATTC TERM 907 638409 - 638439 + g 70 -8.3 -3.27029 | overlap 638408 TGGCGGTTTTGCTTC TTCCCGAATGTCG CTTTC CGCCATTGGGGAA TGTTCATTAGTGGCA TERM 908 638634 - 638650 + g 77 -6.5 -4.53303 | overlap 638636 TAATCCCGTTTCCTG CTCAAGC TCA GCTTGTG TTTTATATACGCCTA TERM 909 638636 - 638648 + g 73 -7.7 -3.87627 | overlap 638634 ATCCCGTTTCCTGCT CAAGC TCA GCTTG TGTTTTATATACGCC HAPS_0624 639583 - 638801 - | prophage antirepressor protein 1/putative DNA-binding protein (Roi) TERM 910 639546 - 639563 + g 93 -9.1 -5.27938 | ATTATTTCCCCATTA CCCACGT TGCA GCGTGGG TTTTTATTTGCCAAT TERM 911 639887 - 639867 - R 80 -9.8 -3.51232 | opp_overlap 639867 639866 639882 CTTTGGGTAAATTAA CCTTCAGT AACAG ACTGAAGG ATTTCATCTACTGAA TERM 912 639867 - 639887 + r 75 -9.8 -2.914 | opp_overlap 639867, overlap 639866 639882 CTTTGGGTAAATTAA CCTTCAGT AACAG ACTGAAGG ATTTCATCTACTGAA HAPS_0625 640063 - 639863 - | phage transcriptional regulatory protein/antirepressor Cro prtR 640190 - 640861 + | transcriptional activator-regulator PrtR/CI repressor TERM 913 641164 - 641133 - g 91 -11.9 -3.8646 | opp_overlap 641132, overlap 641128 641127 GATTAACAACCCAAA TTTTAATTTGGTG GAATTA CACCAAATTAAAA ATAATATCGGCTTAA TERM 914 641298 - 641316 + G 73 -8.8 -3.66139 | overlap 641314 TGCCCTTGAATTTGG CTCTTGGC TCA GCCCAGAG TTTAAACTCTATCTC HAPS_0627 640942 - 641790 + | hypothetical protein TERM 915 642441 - 642430 - g 75 -3 -5.24551 | GGAAATTAAGAAAAA TTTG CCTG CAAA ATACCAAGATGAATT HAPS_0628 641924 - 643567 + | putative prophage Lp2 protein 4 TERM 916 644140 - 644130 - g 73 -5.4 -4.60797 | opp_overlap 644130 TTTTGATACAGAAAA TTGG CTG CCAA TAATTAATAAATTGG dam 643612 - 644427 + | site-specific DNA methylase TERM 917 644444 - 644429 - T 72 -7.5 -3.68529 | opp_overlap 644429 ATCTTATTATCTAAA CCGCC CACCGT GGCGG TTTTCTTTTATCTAA TERM 918 644429 - 644444 + T 93 -7.5 -5.23292 | opp_overlap 644429 ATCTTATTATCTAAA CCGCC CACCGT GGCGG TTTTCTTTTATCTAA HAPS_0630 644746 - 644456 - | putative transcriptional regulator/addiction module antitoxin, putative TERM 919 644954 - 644943 - g 89 -5.8 -5.47431 | TCAACATAGAAAAAA GGCA GAAT TGCC ACCACTTGAATGTAA HAPS_0631 644806 - 645252 + | hypothetical protein TERM 920 645244 - 645297 + T 79 -11.1 -3.07935 | opp_overlap 645260, overlap 645260 ATAAAACCCAATGAT GACCAATAAACAAAAACCCCGAACT CATC AGCTCGGGGTTTATATTAAGTGGTC TTGGGTAACTCAGAT TERM 921 645260 - 645281 + T 86 -10.1 -4.22009 | opp_overlap 645260, overlap 645244 ACCAATAAACAAAAA CCCCGAACT CATC AGCTCGGGG TTTATATTAAGTGGT TERM 922 645281 - 645260 - T 100 -12.3 -5.48514 | opp_overlap 645260 645244 ACCAATAAACAAAAA CCCCGAACT CATC AGCTCGGGG TTTATATTAAGTGGT TERM 923 645554 - 645569 + T 76 -3.4 -5.2696 | overlap 645542 645562 TTATAAAGATATCTT TATTTT CATT AAAATA TTTTTTAAATTTTAC TERM 924 645689 - 645671 - T 100 -10.3 -4.97158 | CGAGATGAAATAAAA GCCCTGT AGAAA ACAGGGC TTGAACACTAAACTT HAPS_0632 645867 - 645697 - | hypothetical protein orfG 645882 - 646103 + | orfG, econed on plasmid pRF1 HAPS_0634 646259 - 646083 - | hypothetical protein TERM 925 646559 - 646580 + H 100 -7.3 -5.44119 | gap 1 ATGATCCGCTACGTT CGCCCA-CTG TAA CAGGTGGGTG TTTTTTTGAGGTAAA HAPS_0636 646599 - 647240 + | hypothetical protein HAPS_0637 647535 - 647314 - | hypothetical protein TERM 926 647772 - 647744 - g 95 -13.3 -3.63068 | opp_overlap 647743 647742 647740 647751 647752, overlap 647752 TGACACCACCCCAAA TCAAAAAAGGGCA TTA CGCCCCTTTTTGA GATTGTTTGAGTAAC TERM 927 647764 - 647752 - g 93 -6.9 -5.37593 | opp_overlap 647752 647751 647743 647742 647740, overlap 647744 CCCCAAATCAAAAAA GGGCA TTA CGCCC CTTTTTGAGATTGTT HAPS_0638 647625 - 647786 + | hypothetical protein HAPS_0639 647945 - 647757 - | hypothetical protein TERM 928 647979 - 648000 + r 74 -10.2 -2.60555 | opp_overlap 647979, overlap 647976 TAGTTGTTTGAAGAA CTAGGGAG CGGTAA CTCCCTAG TAAGTTATCGGATTA TERM 929 648000 - 647979 - R 84 -10.9 -3.61715 | opp_overlap 647979 647976 TAGTTGTTTGAAGAA CTAGGGAGC GGTA ACTCCCTAG TAAGTTATCGGATTA TERM 930 648197 - 648234 + r 75 -8.8 -3.53012 | gap 1, opp_overlap 648205, overlap 648205 AAATCAACAGAAATT TAAAGAAAGCCTACAAA TTATT TTTGTGGGCTTT-TTTA TTTGACACCCACCGC TERM 931 648205 - 648227 + r 100 -8.5 -5.63517 | opp_overlap 648205, overlap 648197 AGAAATTTAAAGAAA GCCTACAAA TTATT TTTGTGGGC TTTTTTATTTGACAC TERM 932 648227 - 648205 - R 76 -6.3 -4.54343 | opp_overlap 648205 648197 AGAAATTTAAAGAAA GCCTACAAA TTATT TTTGTGGGC TTTTTTATTTGACAC TERM 933 648330 - 648344 + r 100 -7.1 -5.60993 | opp_overlap 648330 GCGGTAATAATGATA GTCGC CAAAA GCGAC TTTTTTTATAGCCAA TERM 934 648398 - 648377 - R 77 -8.1 -3.84825 | gap 1, overlap 648381 TCTAGTCAGATTAAA GGTACTTGCA AAT TGCAAG-ACC CTTAAAACTTCAAAA TERM 935 648631 - 648616 - R 73 -6.8 -4.1964 | TTTAACATTTCAAAA CACCGC AATG ACGGTG ATCAGCCAAAAAAAT TERM 936 648709 - 648698 - R 73 -2.2 -5.26316 | TTAGGCTATAAAAAA TCCA TCAG CGGA TATTCCAAACCTTTA TERM 937 649040 - 649026 - R 81 -8.6 -4.17048 | GCTTTTGCAAAAGAA GTGGAA GTA TTCCAC CGTAAACTGTACGAA TERM 938 649113 - 649085 - R 76 -6 -4.62069 | TCGCTATGTTAAAAA CGATATTGCAGG AAAAG CCTACGACATCG CACACGAGTTTAACG TERM 939 649207 - 649223 + r 90 -7.2 -5.19275 | opp_overlap 649207 TTTAACCACAACCAA CCGCTC TTTAT GGGCGG TTTTATTTTATGGAT TERM 940 649250 - 649265 + r 100 -9 -5.4505 | opp_overlap 649250 649249 GGATCAACGAACAAG CCTAGC GAAA GCTAGG TTTTTTATTGGAGGA TERM 941 649894 - 649910 + r 74 -8.1 -3.7331 | CCCCTTCATTTTCTC TTTTGGA ATA TCCAAAA TCTTTTCCTCAAAAT TERM 942 650759 - 650785 + r 100 -12.6 -4.43681 | opp_overlap 650763 AAAATCATTTTGGTA TTAAGAAAAATG CGT CATTTTTCTTAA TTTTGGTATTACATA TERM 943 650781 - 650763 - R 71 -9 -3.14564 | opp_overlap 650759 TCATTTTGGTATTAA GAAAAATG CGT CATTTTTC TTAATTTTGGTATTA TERM 944 650893 - 650919 + r 79 -11 -3.07629 | opp_overlap 650898, overlap 650898 ATACAGCAGAAATGT AAAAAGCCTTGT TTT ACAAGGCTTTTA TATATCATTTGATAT TERM 945 650914 - 650898 - R 100 -10.9 -4.84529 | opp_overlap 650893 650898 GCAGAAATGTAAAAA GCCTTGT TTT ACAAGGC TTTTATATATCATTT TERM 946 650898 - 650914 + r 95 -10.9 -4.65494 | opp_overlap 650898, overlap 650893 GCAGAAATGTAAAAA GCCTTGT TTT ACAAGGC TTTTATATATCATTT apaH 651927 - 651109 - | diadenosine tetraphosphatase mltB 653016 - 651937 - | membrane-bound lytic murein transglycosylase B truB 653946 - 653029 - | tRNA pseudouridine synthase B rbfA 654332 - 653949 - | ribosome-binding factor A TERM 947 654062 - 654079 + g 79 -11.3 -2.73124 | opp_overlap 654053, overlap 654061 AACGAAGTTCAGGCA CGATGCG TAAA CGCATCG CTTTACCCACTAAGG TERM 948 654378 - 654353 - R 79 -6.9 -4.41348 | gap 1, opp_overlap 654353 654353 654357, overlap 654356 654357 TTTCTCTTAAATAAA TAATGGGGCGTA AGA TACGCCCC-TAA ATTGTCTGTCTTATT TERM 949 654376 - 654356 - R 90 -11.1 -4.32678 | opp_overlap 654353 654353 654357, overlap 654353 654357 CTCTTAAATAAATAA TGGGGCGTA AGA TACGCCCCT AAATTGTCTGTCTTA TERM 950 654357 - 654375 + r 95 -14.6 -2.65993 | opp_overlap 654357 654356 654353, overlap 654353 654353 TCTTAAATAAATAAT GGGGCGTA AGA TACGCCCC TAAATTGTCTGTCTT TERM 951 654375 - 654357 - R 100 -14.6 -3.18884 | opp_overlap 654353 654353 654357, overlap 654356 654353 TCTTAAATAAATAAT GGGGCGTA AGA TACGCCCC TAAATTGTCTGTCTT HAPS_0647 654494 - 654375 - | hypothetical protein HAPS_0648 657681 - 654502 - | putative serine protease TERM 952 657552 - 657566 + g 75 -2.8 -5.24129 | opp_overlap 657552, overlap 657554 ATATAGGTGAAGAAA TCGATG TTT CATCTA TTTTTTCTGAACCGC TERM 953 657793 - 657762 - R 73 -5.9 -4.4204 | opp_overlap 657771, overlap 657764 657765 657771 AATAATCAGAATAAA TAGGAAAAACCGC TTTTCT GCGGTTTTTCAAA TGAAAATACAATCTA TERM 954 657791 - 657764 - R 74 -8.5 -3.79611 | opp_overlap 657771, overlap 657762 657765 657771 TAATCAGAATAAATA GGAAAAACCGC TTTTCT GCGGTTTTTCA AATGAAAATACAATC TERM 955 657790 - 657765 - R 84 -12 -2.86682 | opp_overlap 657771, overlap 657764 657762 657771 AATCAGAATAAATAG GAAAAACCGC TTTTCT GCGGTTTTTC AAATGAAAATACAAT TERM 956 657771 - 657784 + r 71 -5.2 -4.62069 | opp_overlap 657771 657765 657764 657762 AATAAATAGGAAAAA CCGC TTTTCT GCGG TTTTTCAAATGAAAA TERM 957 657784 - 657771 - R 76 -5.2 -4.97461 | opp_overlap 657771, overlap 657765 657764 657762 AATAAATAGGAAAAA CCGC TTTTCT GCGG TTTTTCAAATGAAAA TERM 958 658232 - 658272 + r 73 -9.2 -2.78395 | gap 1, opp_overlap 658239 658240 CCCCTATTTATTATA GTTAAAAGCCCCT-TTATC CGCT GATAAAAGGGGCTTGGAAC TACTTGAAATTTATT TERM 959 658265 - 658239 - R 90 -10.3 -4.24948 | gap 1, opp_overlap 658232, overlap 658240 TTATTATAGTTAAAA GCCCCT-TTATC CGCT GATAAAAGGGGC TTGGAACTACTTGAA TERM 960 658263 - 658240 - R 79 -10.4 -3.14487 | opp_overlap 658232, overlap 658239 TATTATAGTTAAAAG CCCCTTTATC CGCT GATAAAAGGG GCTTGGAACTACTTG rplY 658660 - 658373 - | 50S ribosomal protein L25 TERM 961 658700 - 658684 - H 91 -6.5 -5.38054 | opp_overlap 658684, overlap 658685 TCTCATAAATAAAAA GGGAACC TAA GGTTCCA TTGATACAAAAATAG TERM 962 658699 - 658685 - H 84 -10 -3.81748 | opp_overlap 658684, overlap 658684 CTCATAAATAAAAAG GGAACC TAA GGTTCC ATTGATACAAAAATA TERM 963 658730 - 658713 - H 78 -5.5 -4.99035 | opp_overlap 658713 CCATTGATACAAAAA TAGCAGG CGAC CCAGCTA TTTCCCTAAATTTGA TERM 964 659901 - 659890 - g 73 -5.8 -4.57341 | AATCTTGCGGAAAAA GTGG CAAT CCAC CTTAACGACACCCAC glgP 658942 - 661455 + | glycogen phosphorylase TERM 965 661730 - 661742 + G 72 -3.4 -5.06414 | GATTGTGTCTATTGG TGCA CAAAA TGCA TTTTTATTGAAGCAG lysE 661674 - 662297 + | lysine exporter protein (LYSE/YGGA) kgd 662543 - 665350 + | alpha-ketoglutarate decarboxylase HAPS_0654 665386 - 665499 + | hypothetical protein sucB 665515 - 666732 + | dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (E2) TERM 966 666765 - 666741 - f 85 -11.5 -3.30441 | opp_overlap 666739 666739, overlap 666739 AATTTAGAATGAACA TTTCCCCCTTT GAA AAAGGGGGGAA ACAGTTTTAATCACA TERM 967 666962 - 666935 - g 70 -9.8 -2.60075 | overlap 666934 GCTTGGGCAATTAAG TGCCAAGTCCAC GCAG GTGGTCGTGGCA AAGCAGGCGGTGTCA sucC 666797 - 667963 + | succinyl-CoA synthetase subunit beta sucD 667963 - 668835 + | succinyl-CoA synthetase alpha chain TERM 968 668930 - 668945 + T 76 -7.6 -4.086 | opp_overlap 668930 668929 CTTCTGCGATGAAAC TTGCTC TTTA GAGCAA TTATTTACTGTCTTA kefBC 670846 - 668996 - | glutathione-regulated potassium-efflux system protein TERM 969 670800 - 670774 - G 73 -5.8 -4.64657 | CCAAACGTTTAAAAA TAGGTACCGCAA TAA TTGCCGCCCCTA AAAGGGTCACTACAC TERM 970 670975 - 670998 + r 74 -9.5 -2.98493 | opp_overlap 670976, overlap 670972 AAACAATACGAAACA AGGGCGGAC ACATCG GTCCGCCCC TACTTTGGTAATAAA TERM 971 670997 - 670976 - R 95 -13 -4.11363 | opp_overlap 670975 670972 AACAATACGAAACAA GGGCGGAC ACATCG GTCCGCCC CTACTTTGGTAATAA serS 672345 - 671041 - | seryl-tRNA synthetase TERM 972 671417 - 671433 + g 71 -5.1 -4.56597 | TGTCCTGTTAATTCT TCAAGGG CTT CCATTGA TTTTTCAGGGGCAAC glyQ 672780 - 672421 - | glycyl-tRNA synthetase subunit alpha TERM 973 673035 - 673012 - R 70 -8.8 -3.0806 | GTCAAAGCGTTAACA TCCCCCCCTT TGAA AAAGGGGGGC TAGGGGGGATTTCCT smpB 673525 - 673049 - | SsrA-binding protein TERM 974 673465 - 673477 + g 70 -5.5 -4.41616 | CTTCGATAAAATATT CGTGT CTG GCACG TTTATTTAAGGCAAT HAPS_0662 675054 - 673648 - | possible ATPase TERM 975 673685 - 673675 - G 72 -3.2 -5.06816 | ATCCGCTAACAAAAA CTGC AAT ACAG CGTCCATTCTTAAAT ubiH 676264 - 675065 - | 2-octaprenyl-6-methoxyphenol hydroxylase/2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 976 676363 - 676387 + r 81 -8.5 -4.20953 | overlap 676362 676364 AATAAAATCCCCCCT AGCCCCCCTTT TTC AAAGGGGGGAA TTATTGTTATTTTAC TERM 977 676364 - 676386 + r 85 -12 -3.10945 | overlap 676363 676362 ATAAAATCCCCCCTA GCCCCCCTTT TTC AAAGGGGGGA ATTATTGTTATTTTA selD 677437 - 676394 - | selenophosphate synthase TERM 978 676921 - 676943 + g 87 -8.5 -4.48792 | gap 1, opp_overlap 676921 676920, overlap 676918 TTGTTAGATATAAAT CGCAATCAGC TTGT GCTGAT-GCG TTCTTTTTCACTTGT TERM 979 677603 - 677554 - R 100 -16.9 -3.31322 | opp_overlap 677560, overlap 677560 CCTAATTCTGGATAA GAAAAACCCATTTAAAAACATTC TGCT GAACACTTTTAAATGGGTTTTCC CCTTTGCGATGTTTC TERM 980 677597 - 677560 - R 100 -12.3 -5.18726 | opp_overlap 677560, overlap 677554 TCTGGATAAGAAAAA CCCATTTAAAAACATTC TGCT GAACACTTTTAAATGGG TTTTCCCCTTTGCGA HAPS_0665 677764 - 677540 - | hypothetical protein HAPS_0666 677822 - 677935 + | hypothetical protein HAPS_0667 677972 - 678727 + | possible SAM-dependent methyltransferase TERM 981 678756 - 678776 + F 82 -11.1 -3.41051 | opp_overlap 678753 678756, overlap 678757 AAAGAAGTAAATGTA GGGACACGC TGA GCGTGTCCA TTGTGGTAAGGGTGC TERM 982 678776 - 678756 - f 78 -11.1 -2.7411 | opp_overlap 678756 678757, overlap 678753 AAAGAAGTAAATGTA GGGACACGC TGA GCGTGTCCA TTGTGGTAAGGGTGC TERM 983 678757 - 678775 + F 95 -14.6 -2.64416 | opp_overlap 678756 678753, overlap 678756 AAGAAGTAAATGTAG GGACACGC TGA GCGTGTCC ATTGTGGTAAGGGTG TERM 984 678838 - 678818 - f 73 -5.4 -4.62069 | overlap 678819 TCTTTACCTTAAAAA CGGACACA TGCAG TGTGTCCC TACCACAACAAAACA TERM 985 678837 - 678819 - f 73 -8.9 -3.3692 | overlap 678818 CTTTACCTTAAAAAC GGACACA TGCAG TGTGTCC CTACCACAACAAAAC perM 678964 - 680028 + | putative permease, PerM family protein TERM 986 680079 - 680103 + F 81 -7.1 -4.59212 | opp_overlap 680078 680081, overlap 680080 680081 AATTATAAATTTAAC TAGGGACACTT CAT AAGTGTCCCGC TTTATTTGATTAATT TERM 987 680080 - 680102 + F 80 -10.6 -3.33901 | opp_overlap 680078 680081, overlap 680079 680081 ATTATAAATTTAACT AGGGACACTT CAT AAGTGTCCCG CTTTATTTGATTAAT TERM 988 680101 - 680081 - f 100 -14.1 -2.83346 | opp_overlap 680080 680079 680081, overlap 680078 TTATAAATTTAACTA GGGACACTT CAT AAGTGTCCC GCTTTATTTGATTAA TERM 989 680081 - 680101 + F 93 -14.1 -2.59256 | opp_overlap 680081 680078, overlap 680080 680079 TTATAAATTTAACTA GGGACACTT CAT AAGTGTCCC GCTTTATTTGATTAA queA 680130 - 681215 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 990 681271 - 681298 + T 75 -10 -2.81133 | opp_overlap 681277, overlap 681269 681273 CCTAGATTCTACTTA TAGCAACTGTAT TCTT ACACAGTTGCTA TGTAGTCAATAAATA fdhE 682244 - 681324 - | formate dehydrogenase accessory protein FdhE mdoB 684227 - 682287 - | phosphoglycerol transferase-like protein ycbX 685020 - 684232 - | predicted 2Fe-2S cluster-containing protein xseB 685122 - 685346 + | exodeoxyribonuclease VII small subunit ispA 685346 - 686239 + | geranyltranstransferase HAPS_0675 687652 - 686285 - | hypothetical protein fadJ 689822 - 687702 - | fatty oxidation complex, alpha subunit TERM 991 688887 - 688901 + g 70 -8.6 -3.40565 | TTGTTGTACATCTCG CACTTG AGC CAAGTG TTGATATTGCTCCTT TERM 992 689660 - 689648 - G 76 -3.3 -5.28942 | opp_overlap 689648 689649, overlap 689649 TACCCGAAACAAAAA TCACG CCC CGTGC TTGTTGATAAATCAC fadI 691131 - 689827 - | 3-ketoacyl-CoA thiolase TERM 993 691219 - 691194 - R 100 -11.3 -5.56673 | opp_overlap 691194 ATCTAGAATAAAAAA TGGCTCAATCA CATT TGATTGAACCA TTCCATTCGCAGTAA TERM 994 691194 - 691219 + r 71 -9.1 -3.17723 | opp_overlap 691194 ATCTAGAATAAAAAA TGGCTCAATCA CATT TGATTGAACCA TTCCATTCGCAGTAA HAPS_0678 691944 - 691243 - | putative conserved iron-sulfur protein TERM 995 691724 - 691735 + g 74 -4.4 -5.00196 | CAAAGTGCGGTCACT TCTG CGAT CAGA TTTTCTTCTTTCACC HAPS_0679 693355 - 691949 - | iron-sulfur cluster binding reductase HAPS_0680 694088 - 693357 - | Fe-S oxidoreductase TERM 996 694186 - 694207 + r 74 -10.1 -2.64422 | overlap 694176 TCTTTTTATATTGTA GGGACGCCA CGCT TGGCATCCC TACTCTCAAATATAT TERM 997 694298 - 694271 - R 74 -4.8 -4.74706 | gap 1, overlap 694276 TTCAACATTTAAAAA CGAAAGGTGGGGT AAT ACCCCACCTAA-G ATTACACATTGTAGA TERM 998 694294 - 694276 - R 100 -14.6 -4.33653 | overlap 694271 CATTTAAAAACGAAA GGTGGGGT AAT ACCCCACC TAAGATTACACATTG lctP 695895 - 694300 - | L-lactate permease folA 696581 - 696084 - | dihydrofolate reductase TERM 999 696916 - 696934 + G 73 -8.2 -3.89346 | CAGCTTATTCAAGTG TGGGAAAG CCT CTTTTCCA TTTATAACATCAAAA proB 696664 - 697764 + | gamma-glutamyl kinase TERM 1000 698243 - 698259 + G 90 -10.1 -4.44046 | TATGATGGGCTATTC GGGCCTG CCA CAGGCTC TTTCTTTACGCTCGC HAPS_0684 697787 - 698560 + | putative permease nth 698564 - 699199 + | endonuclease III TERM 1001 699288 - 699317 + T 87 -11.5 -3.53761 | opp_overlap 699316 GACTTTCTTCGCTTT GCCTTTTGCAACC AATC GGGTGTAAAAGGC TTTAAAAACAGGTTC TERM 1002 699407 - 699377 - T 100 -18.6 -3.99806 | opp_overlap 699366 699365, overlap 699366 699380 699397 ATAAGGCATTACAAA CAATGCCATTGTTA AAA TAACAATGGCATTG AGCATGAAATTCTAA TERM 1003 699404 - 699380 - T 100 -14.5 -4.11585 | opp_overlap 699366 699365, overlap 699366 699377 699397 AGGCATTACAAACAA TGCCATTGTTA AAA TAACAATGGCA TTGAGCATGAAATTC TERM 1004 700193 - 700205 + T 73 -9.1 -3.42574 | CCGAATTTCCAGTTG GACCC GCA GGGTC TTGTGATCCCGTTGG TERM 1005 700229 - 700259 + T 89 -11.9 -3.45023 | gap 1, overlap 700220 700237 CCGTTGGACCCGCAG GGCCTTGT-GGTCC CGTT GGACCCGCAGGGCC TTGTGGTCCTGCTGG TERM 1006 700678 - 700691 + T 81 -9.5 -3.67558 | CCAGCTTCGCCTCTA GGCCC TGCT GGGCC TTGTTCCCCTCTATC TERM 1007 701092 - 701119 + T 78 -7.8 -4.22375 | gap 1, opp_overlap 701098, overlap 701091 701094 GTGAGCGTACCACTC CACAAGC-CAACC GCT GGTTGTGGTTGTG TTTGTTCGCTGGTAT TERM 1008 701284 - 701300 + T 78 -9.5 -3.55622 | opp_overlap 701275 701278 CCAATATGATTACCA TCAACAC TTT GTGTTGA TTTAAAGCCATTAGC TERM 1009 702868 - 702831 - T 95 -11.5 -4.57341 | gap 1, opp_overlap 702831 AAGTGTTGGTAAAAA GTGGGCT-AAAGCCTTAT AGT ACAAGGCTTTAAGCTCAC TTTTGAAGAATATAC TERM 1010 702831 - 702868 + T 91 -11.5 -4.10657 | gap 1, opp_overlap 702831 AAGTGTTGGTAAAAA GTGGGC-TAAAGCCTTAT AGT ACAAGGCTTTAAGCTCAC TTTTGAAGAATATAC TERM 1011 702917 - 702904 - T 76 -2.4 -5.51046 | TAAATATAGAAAAAA CAAC AAATAG GTTG GAAGGGTTATTTAAA HAPS_0688 703725 - 703117 - | SH3 domain-containing protein TERM 1012 703776 - 703751 - R 100 -12.7 -4.76171 | opp_overlap 703756, overlap 703756 TAAAAAATCATAAAA GAAAAGTGCGA ATAG CCGCACTTTTC TGAATAAAGTCATTA TERM 1013 703756 - 703771 + r 73 -6.1 -4.42653 | opp_overlap 703756 703751 AATCATAAAAGAAAA GTGCG AATAGC CGCAC TTTTCTGAATAAAGT TERM 1014 703771 - 703756 - R 86 -6.8 -5.22137 | opp_overlap 703756, overlap 703751 AATCATAAAAGAAAA GTGCGA ATAG CCGCAC TTTTCTGAATAAAGT HAPS_0689 705061 - 703799 - | phosphate permease HAPS_0690 705761 - 705081 - | phosphate transport regulator TERM 1015 705677 - 705660 - G 72 -3.5 -5.00884 | gap 1, overlap 705662 ACTCGCTTCAAAAAA TG-GGATT AGT AATCCACA ACATTCAGTCACTTT pheS 706071 - 707054 + | phenylalanyl-tRNA synthetase subunit alpha TERM 1016 707102 - 707122 + F 75 -9.7 -2.77148 | opp_overlap 707093 707110, overlap 707095 707093 707110 GATATATGCAGTTTG CGGACACAC GCA GTGTGTCCC TACTGTATTAATGGC TERM 1017 707110 - 707165 + F 75 -9.8 -2.92463 | opp_overlap 707093 707110, overlap 707102 707095 707093 CAGTTTGCGGACACA CGCAGTGTGTCCCTACTGTATTAA TGGCTTAT TTTCTCTTGTAGGGACACACTGCG TGTGTCCATCATAAC TERM 1018 708989 - 708978 - g 70 -5.8 -4.4715 | TGCCAATGCAGAAAA TGGC GTAC GCCA AGAATTTGTCTTAGG TERM 1019 709539 - 709529 - g 81 -5.4 -5.15381 | AAGACACTGAAAAAA CTCT TGA AGAG GAAGAAATTAATGCG pheT 707227 - 709614 + | phenylalanyl-tRNA synthetase subunit beta ihfA 709631 - 709927 + | integration host factor, alpha chain/bacterial nucleoid DNA-binding protein TERM 1020 709965 - 709932 - f 76 -9.8 -2.96941 | opp_overlap 709933, overlap 709929 709923 TAAAAGCCTAAATGA TTATTCTGCGAAAT CTTGGT ATTTCGCAGAATAT TTTTAAGGATCGAAA TERM 1021 709933 - 709964 + F 100 -13.3 -4.59773 | opp_overlap 709932 709929 709923 AAAAGCCTAAATGAT TATTCTGCGAAAT CTTGGT ATTTCGCAGAATA TTTTTAAGGATCGAA TERM 1022 710016 - 710036 + G 93 -8.3 -5.19328 | AAGCATTTTTCTTTA TGCACAATG TTG CTTTGTGCA TTTTTATTGTCCGCT HAPS_0694 709980 - 710492 + | lipoprotein/cell wall-associated hydrolases (invasion-associated proteins), NLP/P60 protein udk 710680 - 711333 + | uridine kinase dcd 711350 - 711934 + | deoxycytidine triphosphate deaminase TERM 1023 711954 - 711994 + T 72 -9.4 -2.62616 | gap 1, opp_overlap 711960, overlap 711955 711960 AATTAACTTCCCTAC GA-AAAATGCCTTTAGT CGTCAAAT ACTAAAGGCATTTTGTC TACTATGCCGCCTAA TERM 1024 711987 - 711960 - T 100 -8.6 -4.72272 | opp_overlap 711955 711954 711960 CTTCCCTACGAAAAA TGCCTTTAGT CGTCAAAT ACTAAAGGCA TTTTGTCTACTATGC TERM 1025 711960 - 711987 + T 90 -8.6 -4.5954 | opp_overlap 711960, overlap 711955 711954 CTTCCCTACGAAAAA TGCCTTTAGT CGTCAAAT ACTAAAGGCA TTTTGTCTACTATGC purF 713579 - 712065 - | amidophosphoribosyltransferase cvpA 714094 - 713594 - | colicin V production protein TERM 1026 713985 - 713973 - G 74 -4.1 -5.05301 | AAATAAGGATAAAAA TGGCT AGA AACCA AAAAAGCAACCACCC TERM 1027 714084 - 714064 - G 85 -2.6 -5.80003 | CTAATAAAGAAAAAA CGATAATT CCGAT AATAATCG CATCAACCATAAATA sdhA 715777 - 714200 - | succinate dehydrogenase/fumarate reductase, flavoprotein subunit trmU 716689 - 715952 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase yjgF 717082 - 716693 - | putative translation initiation inhibitor, yjgF family HAPS_0702 717228 - 717515 + | putative ABC-type transporter HAPS_0703 717505 - 718005 + | acetyltransferase, gnat family ndpA 718033 - 719034 + | nucleoid-associated protein NdpA smpA 719095 - 719430 + | SmpA/OmlA domain-containing protein TERM 1028 719800 - 719817 + G 72 -3.4 -5.08824 | overlap 719801 ATTAGCCTTGCTCTA TGCTGA CAGTAT TCAGCG TTTTTTAGCTAAACA TERM 1029 720444 - 720461 + G 74 -4.8 -4.75472 | opp_overlap 720444 GGCAAATTGAAAATC CGCAGG CTTATC CCTGTG TTTTATTGGTATGCG TERM 1030 720507 - 720493 - g 81 -7.2 -4.65895 | CGGCGGAGCGAAAAA TCCATT GAT AATGGA ACGGTTACAAACCCA anmK 719585 - 720700 + | anhydro-N-acetylmuramic acid kinase TERM 1031 721141 - 721166 + G 73 -8.3 -3.68024 | gap 1, opp_overlap 721163 AAAGATGTATTAGTT GGCATTGCTGCC AGC GGCAG-AACGCC TTATGTGTTAGGCGC murQ 720712 - 721626 + | N-acetylmuramic acid-6-phosphate etherase TERM 1032 721866 - 721876 + G 73 -5.4 -4.49756 | overlap 721860 GAAGCCAATGCCGAA TTGC CTC GCAA TTTTGCTATTTCGCC HAPS_0708 721668 - 721982 + | hypothetical protein truC 721979 - 722707 + | tRNA pseudouridine synthase C, pseudouridylate synthase, 23S RNA-specific HAPS_0710 722725 - 722880 + | hypothetical protein HAPS_0711 722881 - 723345 + | hypothetical protein HAPS_0712 723652 - 723356 - | hypothetical protein HAPS_0713 724076 - 723642 - | oligoketide cyclase/lipid transport protein ispF 724787 - 724284 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 725472 - 724792 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ftsB 725753 - 725472 - | cell division protein FtsB pckA 725940 - 727550 + | phosphoenolpyruvate carboxykinase HAPS_0718 728645 - 727815 - | hypothetical protein TERM 1033 728685 - 728660 - R 100 -12.7 -5.38047 | gap 1, overlap 728661 728662 728664 728678 TAGGTATATAAAAAA TGGAGGGGCGTT TAA AACGCCCCT-CA GGCTGCTGACAAACC TERM 1034 728685 - 728661 - R 100 -14.3 -3.81744 | overlap 728660 728662 728664 728678 AGGTATATAAAAAAT GGAGGGGCGTT TAA AACGCCCCTCA GGCTGCTGACAAACC TERM 1035 728684 - 728662 - R 100 -17.8 -2.87962 | overlap 728660 728661 728664 728678 GGTATATAAAAAATG GAGGGGCGTT TAA AACGCCCCTC AGGCTGCTGACAAAC TERM 1036 728682 - 728664 - R 100 -14.6 -2.97764 | overlap 728662 728660 728661 728678 TATATAAAAAATGGA GGGGCGTT TAA AACGCCCC TCAGGCTGCTGACAA TERM 1037 728840 - 728813 - R 87 -11.4 -3.62046 | gap 1 CCACTTTGTCAATAA TCTGAAGGGCGTT TAA AACGCCCC-CAGA GTGATAAGAAGTTAC rseA 729481 - 728852 - | sigma-E factor negative regulatory protein rpoE 730078 - 729509 - | RNA polymerase sigma factor RpoE HAPS_0721 730217 - 730071 - | hypothetical protein TERM 1038 731307 - 731317 + G 72 -3.2 -5.10933 | GCACCGAAATCTAAA GCAG ACT TTGC TTTTATTTTGCATGC hsdM 730305 - 731852 + | type I restriction-modification system, M subunit hsdS 732128 - 733354 + | type I restriction enzyme specificity protein HsdS TERM 1039 734437 - 734454 + G 100 -7.1 -5.56673 | opp_overlap 734437 734439, overlap 734451 734452 CTTGCCACTGAATTA GACTTTA TTGA TAAAGTC TTTTTTGTTGTCGAT TERM 1040 734629 - 734647 + G 71 -7.4 -3.86015 | opp_overlap 734629 AACAACCTAATGAAA TCGGAAGA TAA TCTGCCGA TTTATCAACAACCTG TERM 1041 734647 - 734629 - g 73 -7.4 -3.97659 | opp_overlap 734629 AACAACCTAATGAAA TCGGAAGA TAA TCTGCCGA TTTATCAACAACCTG TERM 1042 735389 - 735378 - g 70 -3 -5.07107 | opp_overlap 735371 735378 GAAACGGGTAAAAAA TCAA GATA TTGA TTTATTAATTGTGGT hsdR 733453 - 736521 + | type I site-specific restriction-modification system, R (restriction) subunit TERM 1043 736543 - 736528 - T 80 -10.4 -3.39187 | opp_overlap 736527 736524 AATATTTAATATTAA GGTGGG GTAT CCCACC CTCATTATTTGGGGC lnt 738253 - 736736 - | apolipoprotein N-acyltransferase TERM 1044 736810 - 736828 + g 71 -7.4 -3.90112 | opp_overlap 736808 AGTGATTACCATATT GAGCAAAC AGC GTTTGCCC TTTCATTGCAGGCAC TERM 1045 737052 - 737062 + g 72 -3.2 -5.1166 | GTGAGAAGATAATCG GCTT GGT GAGC TTTTTGATTTTGCTG TERM 1046 737524 - 737547 + g 85 -6.8 -5.17353 | opp_overlap 737529 TTCTTACGGTGTAGT TAAAATGGGA TGGA TCCCATTTCA TTTTTTGCTCAATAT TERM 1047 737542 - 737529 - G 73 -6.7 -4.18197 | opp_overlap 737524 ACGGTGTAGTTAAAA TGGGA TGGA TCCCA TTTCATTTTTTGCTC TERM 1048 737676 - 737692 + g 76 -2.1 -5.41143 | ACAACGGCACAGGAA GCGGTCG GAA CAGTCGC TTTTTTTGCGAGATC TERM 1049 738080 - 738093 + g 72 -3.1 -5.01823 | gap 1, overlap 738071 AGCCCATAAGAATGT TC-CCC ATA GGGCGA TTTTCTTATTGTTGT corC 739134 - 738250 - | magnesium and cobalt efflux protein TERM 1050 738666 - 738656 - G 70 -5.4 -4.36262 | opp_overlap 738657, overlap 738657 ATAGCCATATGAAAA CGTT CGG AACG GAACTCTTTTAACAT TERM 1051 739612 - 739631 + G 77 -9.4 -3.53012 | opp_overlap 739610 739624 ATTTAAGAAATCACC CAGTTTCA AAAT TGAAACTG TTTCAGGAAAAAAGC TERM 1052 739923 - 739898 - g 76 -3.4 -5.30448 | overlap 739886 739899 AAAGAAACACAAAAA CGTTTCTTAG ATTGGG CTAAAAAACA GTAATCTACGAAGAA HAPS_0727 739286 - 739927 + | hypothetical protein TERM 1053 740009 - 739972 - T 100 -13.7 -4.57341 | gap 1, opp_overlap 739972, overlap 739974 AAGTGTTGGTAAAAA GTG-GCTTAAAGCCTTCT AGT ACAAGGCTTTAAGCCCAC TTTTTGAAATATGAA TERM 1054 739972 - 740009 + T 100 -13.7 -4.64766 | gap 1, opp_overlap 739972 739974 AAGTGTTGGTAAAAA GTG-GCTTAAAGCCTTCT AGT ACAAGGCTTTAAGCCCAC TTTTTGAAATATGAA TERM 1055 740006 - 739974 - T 100 -16.5 -2.60032 | opp_overlap 739972, overlap 739972 GTGTTGGTAAAAAGT GGCTTAAAGCCTTCT AGT ACAAGGCTTTAAGCC CACTTTTTGAAATAT TERM 1056 740669 - 740656 - T 76 -2.4 -5.51046 | TAAATATAGAAAAAA CAAC AAATAG GTTG AAAGGATTATTTAAA dxr 742013 - 740823 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase HAPS_0730 742282 - 742052 - | hypothetical protein TERM 1057 742365 - 742340 - R 89 -7.5 -5.01042 | overlap 742341 742342 AATCTAAATCAAAAA TTCTTCCCCCA TTTA TGGGGGAAGTC CCCGAGCAATAGCTA TERM 1058 742364 - 742341 - R 84 -11 -3.58998 | overlap 742340 742342 ATCTAAATCAAAAAT TCTTCCCCCA TTTA TGGGGGAAGT CCCCGAGCAATAGCT TERM 1059 742363 - 742342 - R 95 -14.5 -2.74314 | overlap 742341 742340 TCTAAATCAAAAATT CTTCCCCCA TTTA TGGGGGAAG TCCCCGAGCAATAGC TERM 1060 742432 - 742445 + r 72 -9.5 -2.70932 | opp_overlap 742441 742442, overlap 742443 CGTTTCCCCCCAACC CCGCC TAAA GGCGG TACTTCCCCCGCAAG TERM 1061 742443 - 742474 + r 82 -10.8 -3.40403 | opp_overlap 742441 742442, overlap 742432 742446 AACCCCGCCTAAAGG CGGTACTTCCCCCG CAAG CGGGGGAAGAATAG TTATCATAACACCCC TERM 1062 742446 - 742471 + r 90 -13.3 -2.86271 | opp_overlap 742441 742442, overlap 742443 CCCGCCTAAAGGCGG TACTTCCCCCG CAAG CGGGGGAAGAA TAGTTATCATAACAC HAPS_0731 742708 - 742478 - | hypothetical protein relA 744928 - 742721 - | GTP pyrophosphokinase TERM 1063 743525 - 743545 + g 78 -3.9 -5.28778 | opp_overlap 743525, overlap 743525 TTGACTTGGAATTAA CCAATCTCG GCT TGGGTTTGG TTTTTTCTGCGTAAT TERM 1064 743903 - 743916 + g 72 -3.1 -5.08824 | CGCAACGCCCAATTC TGCAT CATC GTGCA TTTTTTGCGTACGAA TERM 1065 745168 - 745180 + H 100 -9.1 -5.86976 | TGCTCCGTCTTTTCG GGTGG TTT CCACC TTTTTTATTTTGTGG hemA 745202 - 746509 + | glutamyl-tRNA reductase (GluTR) TERM 1066 747729 - 747740 + G 76 -4.4 -5.01553 | AGATTTTATTGATTT TGCA CGAG TGCA TTTTATTTCTGCATT engA 746650 - 748164 + | GTP-binding protein EngA rfaE 748177 - 749604 + | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 1067 750161 - 750147 - g 70 -2.8 -5.07011 | TAGATAAAGCAAAAA CAAACG GTA CACTTG AAACAGTTTCCGCTA surA 749672 - 750610 + | peptidyl-prolyl cis-trans isomerase SurA TERM 1068 750629 - 750650 + F 93 -12.3 -4.21744 | opp_overlap 750628 750627 750624 750631, overlap 750623 ATCTAATAATTAAGG GAGCCTCGC ATAT GCGAGGTTC TTTACTTTATTAAAT ksgA 750709 - 751569 + | dimethyladenosine transferase TERM 1069 752136 - 752170 + T 78 -6.4 -4.63542 | opp_overlap 752145, overlap 752138 752145 TCATGTTTTAAAATA GGGGCTAAAGCCTTGT AAT ATAAGGCTTAGGTCAC TTTTTAGCAATTATG murA 753477 - 752203 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase bolA 753758 - 753501 - | morphology/transcription regulator BolA family protein rsbV 754099 - 753761 - | putative anti-sigma factor B antagonist TERM 1070 754017 - 753981 - G 100 -14.5 -5.36441 | overlap 753984 753985 TTGGGAGATAAAAAA GAAGCACGTTGCTTCCA AAG TGGAAGCAACGTGTCAC GGGTAAGCTCGCCAG TERM 1071 754014 - 753984 - G 100 -17 -4.77122 | overlap 753981 753985 GGAGATAAAAAAGAA GCACGTTGCTTCCA AAG TGGAAGCAACGTGT CACGGGTAAGCTCGC TERM 1072 754013 - 753985 - G 100 -20.5 -3.44646 | overlap 753984 753981 GAGATAAAAAAGAAG CACGTTGCTTCCA AAG TGGAAGCAACGTG TCACGGGTAAGCTCG HAPS_0742 754742 - 754107 - | ABC-type transport system involved in resistance to organic solvents, auxiliary component TERM 1073 754487 - 754459 - G 72 -3.2 -5.01732 | gap 2, opp_overlap 754459, overlap 754447 754461 754474 AAGGCGGTGAAAAAA GCTTCA-CG-CTGA ACA TCAGTCGCTGACGC TAAATTTTTACCTAA HAPS_0743 755288 - 754779 - | ABC-type transport system involved in resistance to organic solvents, periplasmic component HAPS_0744 756134 - 755361 - | ABC-type transport system involved in resistance to organic solvents, permease component HAPS_0745 756934 - 756134 - | ABC transporter ATP binding protein TERM 1074 757105 - 757077 - R 100 -8.9 -5.28176 | opp_overlap 757092 TCCATTTACAAAAAA GCATATTGGCTCG AAG CATACCAATATGC TTAATGTTTAGCATT HAPS_0746 757718 - 757128 - | predicted periplasmic or secreted lipoprotein gmhA 758329 - 757739 - | putative phosphoheptose isomerase HAPS_0748 758675 - 758331 - | predicted endonuclease TERM 1075 758407 - 758395 - G 70 -5.5 -4.46656 | opp_overlap 758395 GCCACAACATCAAAA CGACA ATT TGCCG TATCTAAAGATTGAT TERM 1076 758648 - 758610 - G 76 -7.4 -4.15222 | opp_overlap 758612 758623 ATTTTGGGCAATAAA CCGCAAGCCATTCTTTTC TAA GAAAATTTTGGCTTGCTG TTCAAAATATGCACC lppC 760413 - 758677 - | lipoprotein C/GS60 antigen TERM 1077 761236 - 761219 - g 73 -7.7 -3.85114 | AAACTGCAGATGAAA GCGAAGA ATTT TCTCCGC AAGTACTTAAATTAC TERM 1078 761309 - 761287 - g 83 -6.2 -5.1101 | opp_overlap 761289 761289, overlap 761275 TTACCACTGAAAAAA GCGGCCGCAA TTG TTGCAGGCAC TTTTGGCTACAAAAA HAPS_0750 760504 - 761364 + | predicted methyltransferase TERM 1079 761518 - 761506 - f 73 -9.1 -3.32844 | opp_overlap 761501 TTTTTTAGGTTATAA TCCGC CTC GCGGA TCACATTATATAGGA dps 761541 - 762026 + | ferritin and DNA-binding stress protein TERM 1080 762043 - 762072 + T 100 -10.8 -5.58522 | opp_overlap 762043 TTAAAATCTCAAAAA GACCTCTTTGGT AGTAAA ACCACAGAGGTC TTTTTATTTTCTATA TERM 1081 762072 - 762043 - T 100 -10.8 -4.7416 | opp_overlap 762043 TTAAAATCTCAAAAA GACCTCTTTGGT AGTAAA ACCACAGAGGTC TTTTTATTTTCTATA HAPS_0752 763061 - 762222 - | hypothetical protein TERM 1082 762993 - 762970 - G 83 -5.3 -5.33866 | overlap 762959 762972 762990 TAAACTGACAAAAAA TCCGTTTTG TCCGTC CCAAACGGA TAGAGCGTACCGACT TERM 1083 763112 - 763132 + r 95 -12.6 -3.8646 | opp_overlap 763112 CTATAATATTAAAAA CGCAGTGG AAATC CCACTGCG TTTAACTTATTGATC TERM 1084 763132 - 763112 - R 100 -13.3 -4.90906 | opp_overlap 763112 CTATAATATTAAAAA CGCAGTGGA AAT CCCACTGCG TTTAACTTATTGATC TERM 1085 763182 - 763194 + r 71 -4.9 -4.55697 | opp_overlap 763182, overlap 763178 CAATCTAACCCTAAA GTTAT TTG ATAAC TTTGTTTATAGCCAT aidA 765733 - 763157 - | putative pertactin family virulence factor, outer membrane autotransporter/Type V secretory pathway, adhesin AidA purB 765959 - 767326 + | adenylosuccinate lyase TERM 1086 767341 - 767368 + F 82 -7.8 -4.4267 | gap 1, opp_overlap 767342 767349, overlap 767342 ACCTTTCTTCATAAT AGTAGGAACACAC TGC GTGTGT-CCTACA TTTTCGCTTTTCAAA TERM 1087 767367 - 767342 - f 80 -11.3 -3.21276 | gap 1, opp_overlap 767341 767342, overlap 767349 CCTTTCTTCATAATA GTAGGAACACAC TGC GTGTGT-CCTAC ATTTTCGCTTTTCAA TERM 1088 767342 - 767367 + F 80 -11.3 -3.24879 | gap 1, opp_overlap 767342 767349, overlap 767341 CCTTTCTTCATAATA GTAGGAACACAC TGC GTGTGT-CCTAC ATTTTCGCTTTTCAA ldhA 767477 - 768424 + | glycerate dehydrogenase sodC 768449 - 768991 + | superoxide dismutase TERM 1089 769027 - 769064 + F 72 -8.5 -3.56985 | opp_overlap 769027 769026, overlap 769037 AATCTCTAAGACAAG CGGGTAGATTTTGGTAG AATT TTACCAATTTCTACTCG TATTAATTTTTTATG lolC 769077 - 770258 + | lipoprotein releasing system transmembrane protein/ABC-type transport system, involved in lipoprotein release, permease component HAPS_0758 770251 - 770907 + | predicted membrane protein TERM 1090 770953 - 770988 + T 83 -7.1 -4.77165 | gap 1, opp_overlap 770953 CACAATTTGTGTAAA TACCTGTTTCTGAGAT AATAC AT-TCAGACACAGGTA TTTTATTATGAACGA TERM 1091 771349 - 771366 + T 84 -4.9 -5.32944 | gap 1, opp_overlap 771349 GGCTGGGAAGATAAC TG-GGCAA ATA TTGCCACA TTTTTTGATTATCCG TERM 1092 771588 - 771611 + T 71 -8.9 -3.18274 | ATTTATGATTGATTT TGGTGATCG CTTAGA CGATCACCG TTAAGTTGAAATGGG HAPS_0760 772174 - 771662 - | putative phage associated protein TERM 1093 771714 - 771729 + g 77 -6.2 -4.61162 | ATTTCGGCTTGTTCC TCAAAG ATTG CTTTGA TTTGTTCTTTGCTCT TERM 1094 772400 - 772381 - R 100 -8.6 -5.61689 | AAAAGTAATAAAAAA GCCTAGCT GTAA AACTAGGC TTAAACATCATCAAG TERM 1095 773426 - 773450 + r 83 -9.4 -3.99494 | opp_overlap 773426 GAGAGAAATAAAAAA GCCTTGAAAG GTTGA TTTTCAAGGC TTCTTGTTACGTTCG TERM 1096 773450 - 773426 - R 100 -8.7 -5.76237 | opp_overlap 773426 GAGAGAAATAAAAAA GCCTTGAAA GGTTGAT TTTCAAGGC TTCTTGTTACGTTCG TERM 1097 773752 - 773767 + r 73 -3.2 -5.1361 | overlap 773754 GCTAAAGCGTATTGT TCGTCG TTTG CGACTA TTTTTTGCGGTTTGT engD 775042 - 773951 - | GTP-dependent nucleic acid-binding protein EngD pth 775685 - 775101 - | peptidyl-tRNA hydrolase TERM 1098 776073 - 776085 + H 73 -6.3 -4.38876 | overlap 776031 TTAAATGTGATGTAT CAAAC GCG GTTTG TTTATATGTTTTTAA fimB 776119 - 776514 + | fimbrial assembly chaperone TERM 1099 776646 - 776656 + F 70 -5.4 -4.4648 | opp_overlap 776646 TGCCTAATAGCGAAA TGGT TGC ACCA TTTTCTAGTAAAACT HAPS_0766 776801 - 776968 + | hypothetical protein TERM 1100 777606 - 777637 + T 80 -8.7 -3.90298 | opp_overlap 777605, overlap 777601 AGATTGTAGAGAGAG GCGGTGGGATTTT ATAAAA AATATCCCCCCGC TTGTGTTTAATTAAA ilvD 779483 - 777648 - | dihydroxy-acid dehydratase TERM 1101 778024 - 778040 + g 79 -10.8 -3.14931 | ATCTCTTGCATACCC GGCCCG CCTTT CGGGCC TTCGTAGCGGATAAC TERM 1102 779636 - 779658 + G 90 -10.6 -4.17048 | CTTGCTAACTTATCG TACCGAGTCG CAA TGGCTCGGTA TTGTTTTAAAAAACA HAPS_0769 779505 - 779690 + | hypothetical protein HAPS_0772 781756 - 781598 - | hypothetical protein TERM 1103 781953 - 781929 - R 81 -4.3 -5.28826 | opp_overlap 781930 781947, overlap 781930 781947 AAAGCCCACAAAAAA GCCCTACATTC AAA AAATGTAAGGT TTACCTCTGTTATCT TERM 1104 781952 - 781930 - R 72 -7.8 -3.75669 | opp_overlap 781930 781947, overlap 781929 781947 AAGCCCACAAAAAAG CCCTACATTC AAA AAATGTAAGG TTTACCTCTGTTATC HAPS_0773 782299 - 781991 - | hypothetical protein HAPS_0774 782552 - 782274 - | hypothetical protein TERM 1105 783211 - 783188 - R 91 -5.2 -5.88197 | opp_overlap 783188 GCAAAGATAAAAAAA GAGCTAACCA TCTC TGGAAAGCTC TTAAATCATCAATGT HAPS_0775 785464 - 783275 - | putative prophage primase TERM 1106 785285 - 785300 + g 73 -10.4 -2.78816 | opp_overlap 785284 785283 TGTCAGTACAATAGG GGGCGA TTTC TCGCCC TGTGGTAACACATCA TERM 1107 785663 - 785683 + r 81 -6.9 -4.56367 | ATTCCGCCACTTTTA GCGTATC AGTCATA GATACGC TTTCTTTGTGAAATA HAPS_0777 786250 - 785837 - | phage small subunit terminase HAPS_0778 786711 - 786238 - | hypothetical protein HAPS_0779 787193 - 786987 - | hypothetical protein TERM 1108 787160 - 787176 + g 75 -2.9 -5.33405 | overlap 787161 787162 CGTTGATTTGCTCCT GTTGCTC AGT GAGCAGG TTTTTATTTACTCGC HAPS_0780 787531 - 787184 - | hypothetical protein HAPS_0781 787750 - 787556 - | phage transcriptional regulator TERM 1109 787905 - 787954 + r 71 -8.9 -3.11732 | opp_overlap 787912 787914, overlap 787912 787914 GTGTTTTTTTACTGG TACAAAATGGGCGTAAAATCTTA CCAG TAAAATTCTACGCCTATTTTTTA TTAAATGAATTTGGG TERM 1110 787912 - 787947 + r 100 -7 -5.4833 | opp_overlap 787912 787914, overlap 787905 787914 TTTACTGGTACAAAA TGGGCGTAAAATCTTA CCAG TAAAATTCTACGCCTA TTTTTTATTAAATGA TERM 1111 787947 - 787912 - R 91 -9.2 -4.38712 | opp_overlap 787905 787912 787914, overlap 787914 TTTACTGGTACAAAA TGGGCGTAAAATCTTA CCAG TAAAATTCTACGCCTA TTTTTTATTAAATGA TERM 1112 787945 - 787914 - R 80 -11.8 -2.53422 | opp_overlap 787914 787912 787905, overlap 787912 TACTGGTACAAAATG GGCGTAAAATCTTA CCAG TAAAATTCTACGCC TATTTTTTATTAAAT TERM 1113 787914 - 787945 + r 79 -7.4 -4.37495 | opp_overlap 787912 787914, overlap 787912 787905 TACTGGTACAAAATG GGCGTAAAATCTTA CCAG TAAAATTCTACGCC TATTTTTTATTAAAT TERM 1114 787980 - 788003 + r 71 -4.6 -4.80417 | TTGGGTCTATGGTTT GAAAGTAGCA TCAT TGCTTTTTTC TTTGTTGTTTTTCTA HAPS_0782 788764 - 787955 - | hypothetical protein TERM 1115 788159 - 788178 + g 75 -3 -5.2197 | gap 1, overlap 788150 788160 788161 788172 TTTAATTAGACTTTC TA-TTTCAG CAT CTGAAAGTA TTTTTCCTTTTTCTC intA 790040 - 788793 - | phage integrase TERM 1116 789404 - 789414 + g 72 -3.2 -5.00884 | overlap 789410 ATTCATCGGGCATAA TCGC AGG GTGA TTTTTTGCCAGCGGT TERM 1117 790130 - 790093 - R 89 -5.8 -5.40072 | overlap 790095 TTCCCCCTAAAAAAA GATTTAAGGGTATAAA GTGGAT TTCATACCCCTAAATA TACCCCTAAAATTTG TERM 1118 790128 - 790095 - R 81 -8.4 -4.34482 | overlap 790093 CCCCCTAAAAAAAGA TTTAAGGGTATAAA GTGGAT TTCATACCCCTAAA TATACCCCTAAAATT TERM 1119 790281 - 790268 - R 100 -8.1 -6.08342 | opp_overlap 790268 TAAGAAATAAAAAAA CCGCT AAAA AGCGG TTTAATTGAATGTTG TERM 1120 790268 - 790281 + r 77 -8.1 -3.95817 | opp_overlap 790268 TAAGAAATAAAAAAA CCGCT AAAA AGCGG TTTAATTGAATGTTG ubiA 791352 - 790480 - | 4-hydroxybenzoate octaprenyltransferase TERM 1121 791229 - 791219 - G 73 -8.2 -3.85786 | ATTAAAATAGGTAAA GGCG GAA CGCC ATCTGCCACTGCAAA TERM 1122 791397 - 791372 - R 71 -6.9 -3.85817 | ATTTTTCGTTACAAA TATGCACAGCG ACAT CACTGTGAATA AGATGGTTTTGCAAT glpR 792119 - 791355 - | glycerol-3-phosphate regulon repressor kdsA 793050 - 792196 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1123 793193 - 793221 + r 93 -13.4 -3.05022 | opp_overlap 793201, overlap 793201 TTGCACCCTCTCTCT GCTAAAAATAGC CTCAC GCTATTTTTAGC TGTCTCTCTCCCGCA TERM 1124 793222 - 793250 + r 76 -6.8 -4.3851 | gap 1, overlap 793225 793226 CACGCTATTTTTAGC TGTCTCTCTCCCG CAAG CGGGAGAGA-ATG TTTGTATTTAATGTA TERM 1125 793225 - 793248 + r 88 -11 -3.78193 | overlap 793222 793226 GCTATTTTTAGCTGT CTCTCTCCCG CAAG CGGGAGAGAA TGTTTGTATTTAATG TERM 1126 793226 - 793247 + r 100 -14.5 -2.85831 | overlap 793225 793222 CTATTTTTAGCTGTC TCTCTCCCG CAAG CGGGAGAGA ATGTTTGTATTTAAT HAPS_0788 793971 - 793258 - | hypothetical protein hemK 794981 - 794112 - | HemK-like protein/protein-glutamine N-methyl transferase TERM 1127 794916 - 794931 + g 83 -9 -4.08064 | opp_overlap 794916 TTTGGCGTTTAAAAA CGGATC TTGT GATCCG TTTTCAAGCAAGGTT TERM 1128 794931 - 794916 - G 88 -9 -4.56597 | opp_overlap 794916 TTTGGCGTTTAAAAA CGGATC TTGT GATCCG TTTTCAAGCAAGGTT HAPS_0790 795733 - 794990 - | hypothetical protein bsp6IM 796617 - 795730 - | cytosine specific DNA methyltransferase (BSP6IM) TERM 1129 796487 - 796462 - G 71 -6.2 -4.19817 | gap 1, opp_overlap 796462 TCCAGCTATCGAAAA TGTCTGGCAAG GAAAT CCTGCCAG-CA TTACATCAAAGTCAG prfA 797784 - 796702 - | peptide chain release factor 1 TERM 1130 797854 - 797872 + r 71 -8.9 -3.28791 | opp_overlap 797854 GATAAACGCAAAAAA GCCTAGA TATTC TCTAGGC TTCTAGCAAAACACT TERM 1131 797872 - 797854 - R 100 -8.9 -5.24449 | opp_overlap 797854 GATAAACGCAAAAAA GCCTAGA TATTC TCTAGGC TTCTAGCAAAACACT hupA 798171 - 797899 - | DNA-binding protein HU/transcriptional regulator HAPS_0794 798899 - 798303 - | hypothetical protein hemE 799835 - 798909 - | uroporphyrinogen-III decarboxylase TERM 1132 800018 - 799995 - R 88 -5.3 -5.45802 | opp_overlap 799996, overlap 799996 799997 CTCTCAAAATAAAAA TGCCCTATC GGGCTT GATAGGGTA AATCATATCATAAAT TERM 1133 800007 - 799996 - R 71 -7.2 -3.86397 | opp_overlap 799996, overlap 799995 799997 TCTCAAAATAAAAAT GCCC TATC GGGC TTGATAGGGTAAATC yeaD 800836 - 800033 - | aldose 1-epimerase-like protein TERM 1134 800713 - 800689 - G 72 -3.5 -5.09895 | overlap 800692 CACTGAGCCAAAAAA CATCTTGCTCA GCG TGAACAGGTTG CCAGCTCAATAAATG TERM 1135 800860 - 800883 + r 79 -8.2 -4.12474 | opp_overlap 800862, overlap 800862 CTTTTATATAGACAA AAGGGATGTA ACGA TACATCCCTA TTCTTATTATTGATT TERM 1136 800862 - 800881 + r 84 -10.8 -3.63645 | opp_overlap 800862, overlap 800860 TTTATATAGACAAAA GGGATGTA ACGA TACATCCC TATTCTTATTATTGA TERM 1137 800881 - 800862 - R 95 -10.8 -4.64844 | opp_overlap 800860 800862 TTTATATAGACAAAA GGGATGTA ACGA TACATCCC TATTCTTATTATTGA argH 802266 - 800890 - | argininosuccinate lyase TERM 1138 802319 - 802303 - H 72 -3.6 -4.91429 | opp_overlap 802304 802312, overlap 802304 AAATTGCAAATAAAA GGCGGT TTCTC ACCGCT TGTCTTGGTGATTAT TERM 1139 802609 - 802626 + H 85 -4.1 -5.61824 | ATTATGTTGCTAGGT GCTGAAT TTTT AGTCAGC TTTTTTTGCATTTTC potA 802675 - 803787 + | spermidine/putrescine ABC transporter ATPase protein TERM 1140 803861 - 803877 + G 80 -8 -4.36914 | opp_overlap 803861 TTAATCCCGAACTTA CTGGTG TTATT CACCAG TTTTATGACCAAAGA potB 803774 - 804634 + | spermidine/putrescine ABC transporter membrane protein potC 804634 - 805401 + | spermidine/putrescine ABC transporter membrane protein TERM 1141 805445 - 805472 + F 100 -10 -5.29782 | opp_overlap 805449, overlap 805449 GCTTAATTTTCATAC AAAAGAGATCCT ATGT AGGATCTCTTTA TTTTTTCTAAATATC TERM 1142 805449 - 805468 + F 100 -10.8 -5.13354 | opp_overlap 805449, overlap 805445 AATTTTCATACAAAA GAGATCCT ATGT AGGATCTC TTTATTTTTTCTAAA TERM 1143 805468 - 805449 - f 95 -10.8 -4.53705 | opp_overlap 805449 805445 AATTTTCATACAAAA GAGATCCT ATGT AGGATCTC TTTATTTTTTCTAAA hisS 805697 - 806956 + | histidyl-tRNA synthetase HAPS_0802 806966 - 807586 + | hypothetical protein TERM 1144 808290 - 808308 + G 72 -9.6 -3.01712 | GCGGCTGGAATTTCT GTTGCTCG TCT TGAGCAAC TGTTACCAACAGCAA proC 807987 - 808805 + | pyrroline-5-carboxylate reductase hcaT 808802 - 809950 + | putative 3-phenylpropionic acid transporter HAPS_0806 811541 - 810702 - | protein involved in catabolism of external DNA TERM 1145 811431 - 811445 + g 70 -5.8 -4.45168 | opp_overlap 811431 811427 ATGGGTATCAAGGTA GAAAAA GCC TTTTTC TTTCTGTTTTAAGGC ampD 811599 - 812165 + | N-acetyl-anhydromuranmyl-L-alanine amidase/signalling protein AmpD, negative regulator of beta-lactamase expression TERM 1146 812195 - 812179 - T 88 -5.1 -5.52096 | overlap 812180 AAACCCAATAAAAAA CGCCAAT AAA ATCGGCA CAACCAAATTGATAA HAPS_0808 813066 - 812158 - | predicted membrane protein, surface protein TERM 1147 812410 - 812389 - G 73 -5.9 -4.59109 | GAGATCGTTGAAAAA GGCAATG CTACCGTC CATTGCC CCCCAAGCATCATTG TERM 1148 812590 - 812605 + g 89 -9 -4.74103 | TAAAAATACATCACG CAGTGG AATG CCACTG TTTTTAAGTTGAACC TERM 1149 812731 - 812721 - G 70 -3.2 -4.84359 | TTACTCCGACAAAAA CCGT TGC ACAG AGTTGTGCCGACTCA dinP 813210 - 814280 + | DNA polymerase IV TERM 1150 814350 - 814328 - f 72 -9.3 -2.74012 | TCATTATGTTAAGCA TTCGGTAAT CGCTT ATTACCGAA TAACAACAATTTATT TERM 1151 814856 - 814868 + G 74 -6.3 -4.4768 | GACTTTATTGCAAGG GGTAT TAA ATACC TTTGTTATCTTCCTC htpX 814386 - 815237 + | heat shock protein HtpX uvrC 817095 - 815248 - | excinuclease ABC subunit C TERM 1152 815424 - 815442 + g 83 -6 -5.07567 | overlap 815420 815419 CCTCTAAACCGCTTT CGGTAAAG GCT TTTTGCCG TTTTTTACGGTGTCC TERM 1153 816563 - 816546 - G 73 -7 -4.15044 | CTCTCTGGGAATAAA CCCCTT CAACGC AAGGGG CAAGGCAACGCCCGA TERM 1154 817118 - 817096 - R 76 -10.6 -2.58731 | opp_overlap 817097, overlap 817095 817093 TGACATAATCAACAT TTCCCCCTTT GAA AAAGGGGGAT TTAAGATTTTAATAA TERM 1155 817097 - 817117 + r 100 -14.1 -3.77484 | opp_overlap 817096 817095 817093 GACATAATCAACATT TCCCCCTTT GAA AAAGGGGGA TTTAAGATTTTAATA pgsA 817667 - 817119 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase modB 817817 - 818524 + | molybdate ABC transporter permease protein modC 818524 - 819585 + | molybdate transporter ATP-binding protein sodA 819803 - 820423 + | manganese superoxide dismutase TERM 1156 820444 - 820481 + T 74 -3 -5.27335 | overlap 820445 CTGTGAGTAGTGTAT G-GTTGCTAATGAATATT TTAA ATTATTC-TTAGCAACTC TTTTTATTTAAAAAA TERM 1157 820445 - 820479 + T 73 -6.7 -4.27026 | gap 1, overlap 820444 TGTGAGTAGTGTATG GTTGCTAATGAATATT TTAA ATTATTC-TTAGCAAC TCTTTTTATTTAAAA TERM 1158 820515 - 820533 + T 74 -4.6 -5.06414 | opp_overlap 820516 820531, overlap 820516 ATTTGATGCAAGTAA AGCTATAT AGA ATATAGCC TTTTTGTTAAAAGCA TERM 1159 820532 - 820516 - T 77 -8.1 -3.93288 | opp_overlap 820515 820516, overlap 820531 TTTGATGCAAGTAAA GCTATAT AGA ATATAGC CTTTTTGTTAAAAGC TERM 1160 820516 - 820532 + T 72 -8.1 -3.63367 | opp_overlap 820516 820531, overlap 820515 TTTGATGCAAGTAAA GCTATAT AGA ATATAGC CTTTTTGTTAAAAGC TERM 1161 822091 - 822062 - T 86 -6.5 -5.16151 | opp_overlap 822063, overlap 822063 822066 CAAATGTAATAAAAA GTAAGCCGTCA TTATATTT TGACGGCTTAT TTTTATATAGTACAA TERM 1162 822090 - 822063 - T 84 -10 -3.68064 | opp_overlap 822063, overlap 822062 822066 AAATGTAATAAAAAG TAAGCCGTCA TTATATTT TGACGGCTTA TTTTTATATAGTACA TERM 1163 822063 - 822090 + T 100 -10 -5.00895 | opp_overlap 822062 822063 822066 AAATGTAATAAAAAG TAAGCCGTCA TTATATTT TGACGGCTTA TTTTTATATAGTACA TERM 1164 822087 - 822066 - T 71 -7.3 -3.9407 | opp_overlap 822063, overlap 822063 822062 TGTAATAAAAAGTAA GCCGTCA TTATATTT TGACGGC TTATTTTTATATAGT HAPS_0817 822273 - 822127 - | hypothetical protein HAPS_0818 822521 - 822324 - | hypothetical protein TERM 1165 822656 - 822639 - R 75 -7 -4.20531 | opp_overlap 822639 TATATTGATTGAAAA GGGTTC ACATTA GAACCC TTTATAGATGTTTAA TERM 1166 822639 - 822656 + r 71 -7 -3.99957 | opp_overlap 822639 TATATTGATTGAAAA GGGTTC ACATTA GAACCC TTTATAGATGTTTAA HAPS_0819 823024 - 822674 - | hypothetical protein TERM 1167 822770 - 822784 + g 70 -3.6 -4.95806 | overlap 822772 822778 TGGAATATTATCAGG TTTTGT ACT ACAAGA TTTTTCTAGTAATTT HAPS_0820 823813 - 823040 - | hypothetical protein TERM 1168 823070 - 823088 + g 70 -8.2 -3.76968 | opp_overlap 823084 823086 AGTAATTGGATTTTG TGGTGCTT TAT AAGCATCA TTTGATGAATAGGTT HAPS_0821 824251 - 823823 - | hypothetical protein TERM 1169 824256 - 824282 + H 74 -8.2 -3.64915 | opp_overlap 824251, overlap 824250 GATTTAAACATAGCG TACCTCAATTTA GTT TAAATTTAGGTA TTCTAGTTTATGAAC TERM 1170 824417 - 824403 - g 74 -5 -4.76171 | opp_overlap 824403 GAAAAAATCAGAAAA CTTCGT GAA ACAAAG TTATGGTCGCAAGAG HAPS_0822 824376 - 824765 + | transcriptional regulator/helix-turn-helix domain-containing protein TERM 1171 824796 - 824779 - T 83 -7 -4.86029 | opp_overlap 824779, overlap 824774 AGAAATAACATAAAA TGGAGC TTGAAT GCTCCA TTTTTATAAATCCAG TERM 1172 824779 - 824796 + T 83 -7 -4.87665 | opp_overlap 824779 824774 AGAAATAACATAAAA TGGAGC TTGAAT GCTCCA TTTTTATAAATCCAG intA 826017 - 824800 - | CP4-57 prophage, integrase HAPS_0824 826466 - 826585 + | hypothetical protein TERM 1173 826633 - 826596 - f 71 -5.2 -4.62772 | gap 1, opp_overlap 826602, overlap 826600 TGTAAATTAAAGAAA TCT-ATACAAAAAAATC TCCTT GAATTTTTTGTATTAGA AGTCACTGTCCGTTC TERM 1174 827270 - 827291 + F 91 -11.6 -3.66844 | opp_overlap 827261 TACAATTGTTTTTAG GGGCGAAC CGATGT GTTCGCCC TTATTAAAATGTAGA pryE 827364 - 828008 + | orotate phosphoribosyltransferase TERM 1175 828203 - 828166 - T 78 -6.5 -4.56775 | gap 1, opp_overlap 828166 828168 828169, overlap 828167 828169 ATTTGTTGCTAAAAA GTA-GCTTAAAGCCTTAT AGT ACAAGACTTTAAGCCTTC TTTTTGAAATATGAA TERM 1176 828199 - 828169 - T 90 -12.8 -3.23708 | opp_overlap 828169 828168 828166, overlap 828167 828166 TGTTGCTAAAAAGTA GCTTAAAGCCTTAT AGT ACAAGACTTTAAGC CTTCTTTTTGAAATA TERM 1177 828303 - 828345 + T 100 -13.8 -3.34013 | opp_overlap 828313, overlap 828304 828313 TACTTTTGTTCGTCC CGCCATAAAACTTTTTCTTT CAC AAAGAAAAAGTTTTATGACA TTCATTACAAAAATA TERM 1178 828304 - 828344 + T 100 -17.3 -2.60194 | opp_overlap 828313, overlap 828303 828313 ACTTTTGTTCGTCCC GCCATAAAACTTTTTCTTT CAC AAAGAAAAAGTTTTATGAC ATTCATTACAAAAAT TERM 1179 828335 - 828313 - T 95 -10.8 -4.36914 | opp_overlap 828304 828303 828313 CGTCCCGCCATAAAA CTTTTTCTTT CAC AAAGAAAAAG TTTTATGACATTCAT TERM 1180 828313 - 828335 + T 95 -10.8 -4.43189 | opp_overlap 828313, overlap 828304 828303 CGTCCCGCCATAAAA CTTTTTCTTT CAC AAAGAAAAAG TTTTATGACATTCAT TERM 1181 828452 - 828424 - T 78 -9.7 -3.41053 | opp_overlap 828424 828430, overlap 828430 GCAAACTAGCTATAA TAAAAACGGCATT TTA AGTGCCGTTTCTA TTTCTATGGTTAAGA TERM 1182 828424 - 828452 + T 86 -9.7 -4.1347 | opp_overlap 828424 828430, overlap 828430 GCAAACTAGCTATAA TAAAAACGGCATT TTA AGTGCCGTTTCTA TTTCTATGGTTAAGA TERM 1183 828446 - 828430 - T 86 -6.5 -5.20333 | opp_overlap 828424 828430, overlap 828424 TAGCTATAATAAAAA CGGCATT TTA AGTGCCG TTTCTATTTCTATGG TERM 1184 828430 - 828446 + T 90 -8.7 -4.43283 | opp_overlap 828430 828424, overlap 828424 TAGCTATAATAAAAA CGGCATT TTA AGTGCCG TTTCTATTTCTATGG rho 829661 - 828462 - | transcription termination factor Rho HAPS_0828 829796 - 829906 + | hypothetical protein TERM 1185 829918 - 829900 - g 73 -2.4 -5.32608 | overlap 829902 829913 AAAAAAGGGAAAAAA TGGCTGAT AAT ATCAACGA AGTTCGCTTGGATAA TERM 1186 830213 - 830187 - g 72 -3.6 -5.03945 | opp_overlap 830188, overlap 830188 CAAGAACGAGAAAAA TCGCCTTTGCCC GTA AAGCAAATGCGT TGTCGATGCCACACC hslR 829899 - 830267 + | heat shock-like protein 15 TERM 1187 830334 - 830353 + F 85 -9.3 -4.02581 | overlap 830329 ATAGCTTTTGTAATG GCGGTGA TTTTTC TCACCGC TTGTATTTTATGAAG TERM 1188 830399 - 830415 + G 78 -3.7 -5.27335 | opp_overlap 830400, overlap 830400 CTTACACACAAGATA ACGATAA ACT TTATCGC TTTTTATTTGAAAAC TERM 1189 830414 - 830400 - g 71 -7.2 -3.82061 | opp_overlap 830399 830400 TTACACACAAGATAA CGATAA ACT TTATCG CTTTTTATTTGAAAA TERM 1190 831184 - 831200 + G 76 -7.3 -4.15044 | overlap 831186 GATATGCAGTGCGAG TGTTGCG GTA CGCAATA TTTCTTCGACCAAAA TERM 1191 831186 - 831198 + G 70 -7.7 -3.6761 | overlap 831184 TATGCAGTGCGAGTG TTGCG GTA CGCAA TATTTCTTCGACCAA hslO 830377 - 831246 + | Hsp33-like chaperonin TERM 1192 831299 - 831256 - f 100 -14.8 -2.7566 | opp_overlap 831256 831259, overlap 831259 AGTTAATTTGAACGA CAAGCGGTAAGATTAGTAAA ACAT TTTGCAAATCCTACCGCTTG TAACTTAGGAAAATA TERM 1193 831256 - 831299 + F 95 -14.8 -2.52676 | opp_overlap 831256 831259, overlap 831259 AGTTAATTTGAACGA CAAGCGGTAAGATTAGTAAA ACAT TTTGCAAATCCTACCGCTTG TAACTTAGGAAAATA TERM 1194 831259 - 831296 + F 80 -10.7 -3.41878 | opp_overlap 831256 831259, overlap 831256 TAATTTGAACGACAA GCGGTAAGATTAGTAAA ACAT TTTGCAAATCCTACCGC TTGTAACTTAGGAAA TERM 1195 831296 - 831259 - f 82 -10.7 -3.52539 | opp_overlap 831259 831256, overlap 831256 TAATTTGAACGACAA GCGGTAAGATTAGTAAA ACAT TTTGCAAATCCTACCGC TTGTAACTTAGGAAA TERM 1196 832049 - 832028 - g 85 -3 -5.72622 | TTGATAAATAAAAAA TCAAAAGG AAATTG CCTTTGGA CGAGAGAATTGGCGA dnaQ 831317 - 832087 + | DNA polymerase III subunit epsilon TERM 1197 832323 - 832280 - T 100 -15 -4.26953 | opp_overlap 832290, overlap 832290 AACTAATTTAAGAAA CATATAAAAAGCCAATCATA TATC TATGATTGGCTTTTTATTTA GACTATCTATACGTA TERM 1198 832313 - 832290 - T 100 -12.6 -5.1634 | opp_overlap 832290, overlap 832280 AGAAACATATAAAAA GCCAATCATA TATC TATGATTGGC TTTTTATTTAGACTA TERM 1199 832290 - 832313 + T 100 -12.6 -5.28942 | opp_overlap 832290 832280 AGAAACATATAAAAA GCCAATCATA TATC TATGATTGGC TTTTTATTTAGACTA gnd 833826 - 832372 - | 6-phosphogluconate dehydrogenase TERM 1200 832981 - 832969 - G 73 -7.7 -3.88015 | TACACAACGAGCAAA CACTG ACT CAGTG ATTAAGGTTAATGGA TERM 1201 833862 - 833890 + r 82 -6.7 -5.05601 | overlap 833863 833866 833874 833876 TTGAATACTTTATTG TTTTGGGGCTAAT GTG ATTAGCCCCTACG TTTTTATGTCTAATA TERM 1202 833866 - 833886 + r 100 -14.1 -2.91457 | overlap 833863 833862 833874 833876 ATACTTTATTGTTTT GGGGCTAAT GTG ATTAGCCCC TACGTTTTTATGTCT TERM 1203 833954 - 833983 + r 72 -3.7 -5.05601 | gap 1, opp_overlap 833954, overlap 833955 833966 833968 TTCCGCACCAATTTA TTTTA-GGGCTAAT GTG ATTAGCCCCTACAG TTTTTATATCTAATA HAPS_0834 834682 - 834164 - | hypothetical protein TERM 1204 834380 - 834404 + g 90 -12.3 -3.70104 | overlap 834383 CGATGTCCCTTTTTG TAGGGGCAAAT TAC ATTTGCCCTTA TTATATTCGGTAATT TERM 1205 834383 - 834401 + g 91 -11.8 -3.97511 | overlap 834380 TGTCCCTTTTTGTAG GGGCAAAT TAC ATTTGCCC TTATTATATTCGGTA TERM 1206 834495 - 834505 + g 74 -4 -5.06451 | opp_overlap 834487, overlap 834475 834475 AAAAATTCTGGGATT TGTT CCC AACA TTTTTTCACATAATG HAPS_0835 835093 - 834734 - | integral membrane protein TERM 1207 834910 - 834895 - G 76 -3.2 -5.24449 | opp_overlap 834904 TACAAAGGGAAAAAA TAAGCC CAGC GGCTAA AAATCCGTTATATAA HAPS_0836 836121 - 835102 - | hypothetical protein TERM 1208 835816 - 835838 + g 82 -12.2 -2.9518 | opp_overlap 835827 ATGTGTCCACGTCAA TTTGGAAATC ACT GATTTCCAAA TCTCTAAATCTTGGA devB 836858 - 836160 - | 6-phosphogluconolactonase TERM 1209 836205 - 836216 + g 70 -5.8 -4.32046 | ATACCACTCCGTTAC GCCA TTTT TGGC TTTAATTTTTGCCGC TERM 1210 836364 - 836376 + g 72 -9.1 -3.37259 | overlap 836362 GGATATGCGGATTTG CCCTG TTT CAGGG TGTTTGGCAATAATT TERM 1211 836918 - 836875 - R 70 -6.8 -4.08216 | gap 1, opp_overlap 836884 836885 836914 TCACTTTCCTTAAAA TCCCCCCTAAT-CCCCCCTTT TTC AAAGGGGGAAATTTATGAGGA ATAGATGATCTTGTA TERM 1212 836884 - 836908 + r 71 -7.1 -3.86897 | opp_overlap 836875, overlap 836885 TTAAAATCCCCCCTA ATCCCCCCTTT TTC AAAGGGGGAAA TTTATGAGGAATAGA TERM 1213 836885 - 836907 + r 77 -10.6 -2.91924 | opp_overlap 836875, overlap 836884 TAAAATCCCCCCTAA TCCCCCCTTT TTC AAAGGGGGAA ATTTATGAGGAATAG zwf 838458 - 836974 - | glucose-6-phosphate 1-dehydrogenase TERM 1214 837901 - 837885 - G 77 -6.5 -4.5115 | opp_overlap 837884 837885, overlap 837879 TAGAAAAACGCAAAA CGAGCAA ATT TTGCACG GTTTCTTTGCCTAAA TERM 1215 838513 - 838485 - R 84 -3.3 -5.61824 | GAAAATGTAAAAAAA TTGTTAGATTTCA TAA CAAAATATAACAA TAAGTAAAATCAATT cysQ 839335 - 838523 - | 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase prfB 839917 - 840663 + | peptide chain release factor 2 TERM 1216 840721 - 840700 - T 100 -14.5 -3.9712 | opp_overlap 840696 GGATGCTAGTAGAAA TCCCCGTTC TGAA GAACGGGGA AAACTTTGGATACTA HAPS_0841 841586 - 840753 - | hypothetical protein HAPS_0842 842935 - 841838 - | ISAma3, family ISAs1 TERM 1217 843441 - 843419 - R 89 -10.6 -4.17048 | GCTTTTTTAAAACAA TACCGAGCCA TTG CGACTCGGTA CGATAAGTTAGCAAG comEA 843961 - 843620 - | DNA uptake protein oapA 844219 - 845484 + | opacity associated protein A TERM 1218 845501 - 845489 - f 71 -4.9 -4.56978 | opp_overlap 845491 845493, overlap 845491 845492 TTTTTAAATAATAAA TATTG AGG CAATA ATATCATCATTGCCT TERM 1219 845493 - 845517 + F 77 -10.1 -3.15257 | opp_overlap 845489 845492 845491, overlap 845491 TAAATAATAAATATT GAGGCAATAAT ATC ATCATTGCCTC TCTCTATATTTAAAA TERM 1220 845859 - 845841 - g 83 -5.2 -5.32608 | opp_overlap 845841, overlap 845843 845846 AAAAAAGGCAAAAAA TACAGCGA TAT CCGCTGGA TATGGTCAGAAGATT TERM 1221 845857 - 845843 - g 77 -7.8 -4.24654 | opp_overlap 845841, overlap 845841 845846 AAAAGGCAAAAAATA CAGCGA TAT CCGCTG GATATGGTCAGAAGA oapB 845544 - 845942 + | opacity associated protein B TERM 1222 846497 - 846487 - g 77 -8.2 -4.14472 | opp_overlap 846487 846482 TGAATATGCCGAAAA CCGC GAA GCGG TTGGCTTCTGCCCGG rfaF 845951 - 847003 + | ADP-heptose:LPS heptosyltransferase II acpD 847099 - 847686 + | azoreductase/NAD(P)H dehydrogenase (quinone) TERM 1223 847695 - 847726 + F 79 -11 -2.90982 | opp_overlap 847695 847699 847701, overlap 847701 ATTCTAATTTAATGA TAAATACACCGTCT AATT AGGCGGTGTTTTTA TATGTAACCGTTTGT TERM 1224 847701 - 847720 + F 100 -10 -5.03994 | opp_overlap 847699 847695 847701, overlap 847695 ATTTAATGATAAATA CACCGTCT AATT AGGCGGTG TTTTTATATGTAACC TERM 1225 848520 - 848506 - g 71 -5 -4.64766 | overlap 848508 CCTATATTGCAAAAA CAGCAA GCC TTGCTA AAGAGCCACAAGTTG manB 847857 - 849515 + | phosphomannomutase TERM 1226 849910 - 849884 - g 72 -4.4 -4.82678 | overlap 849885 CTATAAAAAGTAAAA GTGGTGCCCT ATCTCCA AGAGCACCAG AAAAAATCCGTAATA TERM 1227 850272 - 850294 + G 91 -12.2 -3.7941 | opp_overlap 850291 850293 AATTATACGTACTTG TGCCTTTTAT GGA ATAAAAGGCA TTATTGTAGAAAATA ftsJ 849646 - 850653 + | rRNA methyltransferase ispB 850856 - 851839 + | octaprenyl-diphosphate synthase TERM 1228 851840 - 851850 + F 72 -4 -4.99947 | opp_overlap 851840 851845 851846 GATCGTAGTTATTAA GTAA ATG TTAC TTTTCTTTGCTTCGC TERM 1229 851880 - 851845 - f 88 -10.7 -3.96298 | opp_overlap 851840, overlap 851840 851846 TAGTTATTAAGTAAA TGTTACTTTTCTTTG CTTCGC CAAAGAAAAGTAACC AAAAGAAAGGCGACC TERM 1230 851879 - 851846 - f 100 -14.2 -2.97297 | opp_overlap 851840, overlap 851840 851845 AGTTATTAAGTAAAT GTTACTTTTCTTTG CTTCGC CAAAGAAAAGTAAC CAAAAGAAAGGCGAC HAPS_0852 852048 - 852788 + | hypothetical protein TERM 1231 853154 - 853138 - g 74 -5.1 -4.72272 | TTCCCTGAGCAAAAA CCTGC GGTAATG GCAGG ACATAGCTTGGGCGA fabD 852883 - 853818 + | malonyl CoA-acyl carrier protein transacylase (MCT) TERM 1232 853852 - 853828 - f 74 -10.1 -2.70268 | overlap 853827 853826 TTTTAATTAAAAATT TCCCCCTTT GAAAAAA AAAGGGGGA TTAAGGGGGATTTAA fabG 853961 - 854686 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 1233 854705 - 854741 + T 100 -10.4 -5.1383 | opp_overlap 854709, overlap 854709 TTTCAAAAAATAAAT AAAAGCTGAATTTTGT AATAG GCAAAATTCAGCTTTA TTTTTATCTATTATT TERM 1234 854709 - 854737 + T 100 -11.2 -5.02777 | opp_overlap 854709, overlap 854705 AAAAAATAAATAAAA GCTGAATTTTGT AATAG GCAAAATTCAGC TTTATTTTTATCTAT TERM 1235 854737 - 854709 - T 100 -10.5 -5.3472 | opp_overlap 854709 854705 AAAAAATAAATAAAA GCTGAATTTTG TAATAGG CAAAATTCAGC TTTATTTTTATCTAT HAPS_0855 854800 - 854687 - | hypothetical protein brnQ 854802 - 856088 + | branched-chain amino acid permease TERM 1236 856110 - 856125 + F 100 -11.8 -5.24129 | TTATTTTGTTGTATA GGGGCG TTTT CGCCCC TTTTTTATAAGGAAA mutM 856145 - 856969 + | formamidopyrimidine-DNA glycosylase TERM 1237 857385 - 857368 - T 78 -9.9 -3.4678 | ATCCCCACACGACAA GCAATGC GAAC GCATTGC CTAGCCAAAATGCCC TERM 1238 857575 - 857542 - T 86 -9.8 -4.19483 | opp_overlap 857549, overlap 857549 TTACACATAGAGAAA TAAAAAACTCAGCC GATTTT GACTGAGTTTTTCA TTTTAAGGGGAAGGG TERM 1239 857549 - 857568 + T 76 -4.2 -5.0925 | opp_overlap 857542 857549 TAGAGAAATAAAAAA CTCAGCCG ATTT TGACTGAG TTTTTCATTTTAAGG TERM 1240 857568 - 857549 - T 88 -5.7 -5.76237 | opp_overlap 857549, overlap 857542 TAGAGAAATAAAAAA CTCAGCC GATTTT GACTGAG TTTTTCATTTTAAGG HAPS_0859 857962 - 857594 - | bacteriophage transcriptional regulator HAPS_0860 858362 - 857964 - | Mu-like phage E16 protein HAPS_0862 858683 - 858525 - | hypothetical protein HAPS_0863 858895 - 858683 - | hypothetical protein gam 859416 - 858892 - | host-nuclease inhibitor protein HAPS_0865 859627 - 859409 - | hypothetical protein exeA 860774 - 859620 - | ExeA protein, phage-like protein TERM 1241 860666 - 860678 + g 86 -7.7 -4.90136 | TCTCTTCTACTTTCT CCCAA TTT TTGGG TTTTTGATGTTGATT HAPS_0867 862427 - 860817 - | putative phage associated protein TERM 1242 861895 - 861885 - G 73 -2.4 -5.21709 | CGGCACACCAAAAAA CGGC TCT GCAG GACTGTCTTTTTTCT HAPS_0868 863520 - 862630 - | putative phage associated protein HAPS_0869 863851 - 863549 - | putative phage-related DNA-binding protein TERM 1243 863811 - 863836 + g 82 -6.1 -4.86001 | gap 1, opp_overlap 863810, overlap 863809 863811 863813 863831 AAGGCTTTTAAAATC CGCAACGCC-CG TTG CGTGGTGTTGAG TTTTTCTCGGCTCAT HAPS_0870 863991 - 863848 - | hypothetical protein TERM 1244 863934 - 863946 + g 74 -4.1 -5.0538 | CGGCTTTATAAGCCT TGCTG TTC CAGTA TTTTTTCAAATACCA HAPS_0871 864047 - 864295 + | hypothetical protein TERM 1245 864332 - 864360 + T 100 -11.7 -5.54338 | opp_overlap 864332 TTTCATACTCATCAA CGGCTGTTGCGTT CGC ACCGCAACGGTCG TTTTTATTTTCATTG TERM 1246 864399 - 864415 + T 74 -3.6 -5.24129 | opp_overlap 864400, overlap 864400 AATCTCCTATAACAA AGCGGT CAAAA ACCGCA TTTTTTCTGCAAAAA TERM 1247 864414 - 864400 - T 78 -7.8 -4.30987 | opp_overlap 864399 864400 ATCTCCTATAACAAA GCGGTC AAA AACCGC ATTTTTTCTGCAAAA HAPS_0872 864721 - 864488 - | putative phage associated protein HAPS_0873 864785 - 865084 + | hypothetical protein TERM 1248 865103 - 865115 + F 78 -5.5 -5.0133 | TATCTACCAACGTTT CTTGC ACG GCAGG TTTTTTCAAAAAATA TERM 1249 865347 - 865324 - f 79 -3.3 -5.48054 | ATTAAAAGCAAAAAA TCTAAAAAT CAGAGC ATTTTCAGA CCTTACAGGGATACC HAPS_0874 865409 - 865639 + | hypothetical protein HAPS_0875 865687 - 866658 + | conserved hypothetical phage-related protein TERM 1250 867365 - 867340 - g 80 -4.7 -5.24531 | overlap 867342 ATGTGTTACAAAAAA TAGAACGCATT AATG AAGGCGTTCGA AAGGATTATGCTCTT TERM 1251 867363 - 867342 - g 76 -7.3 -4.25873 | overlap 867340 GTGTTACAAAAAATA GAACGCATT AATG AAGGCGTTC GAAAGGATTATGCTC TERM 1252 867549 - 867561 + G 74 -4.1 -5.09221 | GGAGATAATTGGCTA GTGTA TGT TGCAC TTTGTTTTTATTGTG TERM 1253 867667 - 867657 - g 85 -6.8 -5.10208 | CAATTTGAACAAAAA GGCA AAG TGCC AAAAGAACTAAAACC HAPS_0876 866658 - 867836 + | putative phage-related membrane protein TERM 1254 867881 - 867923 + F 100 -9.5 -5.36441 | opp_overlap 867881 CCTACCACATCTAAA CTCCTATTAACTTTTAA ACCAATTTA TAAAAAGTTAATAGGAG TTTTTTATGTCCCAA TERM 1255 867923 - 867881 - f 81 -9.5 -3.727 | opp_overlap 867881 CCTACCACATCTAAA CTCCTATTAACTTTTAA ACCAATTTA TAAAAAGTTAATAGGAG TTTTTTATGTCCCAA HAPS_0877 867930 - 868451 + | hypothetical bacteriophage protein TERM 1256 868604 - 868617 + G 79 -6.7 -4.58283 | opp_overlap 868581, overlap 868581 GTCGCCTTTCGACCA CTGGA TTTA TCCAG TTTTTCGGGGCGTTG HAPS_0878 868552 - 868785 + | hypothetical protein HAPS_0879 868782 - 869135 + | hypothetical protein TERM 1257 869356 - 869340 - g 85 -7.3 -4.87803 | CAGCTTGAAACAAAA GTGGATA ACT TACCCAC CGCTCAAGATGTCGC HAPS_0880 869160 - 869489 + | Mu-like phage gp25 HAPS_0881 869493 - 869783 + | hypothetical bacteriophage protein HAPS_0882 869817 - 870389 + | Mu-like phage gp27 HAPS_0883 870451 - 871686 + | prophage MuMc02, terminase, ATPase subunit, putative/putative DNA packaging protein Gp17 TERM 1258 871936 - 871924 - g 70 -3.4 -5.00339 | opp_overlap 871924, overlap 871917 ACGAATAATGAAAAA GTTG ATGAG CAAC TTTATCAAGTATTTA HAPS_0884 871690 - 873108 + | putative phage-related protein HAPS_0885 873105 - 874373 + | Mu GP30-like protein/phage putative head morphogenesis protein, SPP1 gp7 HAPS_0886 874500 - 874955 + | bacteriophage Mu G-like protein/virion morphogenesis protein TERM 1259 874973 - 874996 + F 73 -5.4 -4.64763 | overlap 874972 TTCAAAAATAACGCC TAAAACGC CCGATTTA GCGTTTTA TTCTTTTTTCAATAA TERM 1260 875065 - 875030 - f 85 -9.2 -4.04474 | opp_overlap 875035 ATAGCTCGATACAAA TTCAAGGCGTTTATAA ACAC CTGTAAACGCCTTAAA TCGCATATTACACTT HAPS_0887 875176 - 876282 + | hypothetical bacteriophage protein TERM 1261 876688 - 876677 - g 70 -5.8 -4.39386 | opp_overlap 876676, overlap 876669 GTTAAATCACGAAAA GCGT GTTC ACGC CTTAGTCAGCAATGA HAPS_0888 876318 - 877259 + | hypothetical bacteriophage protein TERM 1262 877602 - 877564 - g 73 -8.8 -3.6501 | AACAAGCATTGCAAA CCGCTTTAGCCGAGGCTC AAG AAGCCCATACCAAAGCGG AAGCCTTAGCCAGTG HAPS_0889 877326 - 877769 + | Erp22-like protein HAPS_0890 877772 - 878209 + | hypothetical bacteriophage protein TERM 1263 878318 - 878334 + G 70 -9.4 -2.57756 | overlap 878317 878316 GCCATTATTTTCTGT CGCACC CAAAC GGTGCG GTCTTGATTAGTTAT HAPS_0891 878209 - 878709 + | hypothetical bacteriophage protein TERM 1264 879701 - 879680 - g 73 -7.2 -4.07306 | ATATTCAATCAGAAA CCAACCGC TTGAAT GCGGTGGG AATTACGACGGTATT HAPS_0892 878719 - 880113 + | bacteriophage tail sheath protein HAPS_0893 880113 - 880631 + | tail core-like protein TERM 1265 881094 - 881131 + F 72 -8.5 -3.61398 | opp_overlap 881093 881094 ACGGTTTTCAAGAAG GTTTGGACTTTTCCCCA ATTT TGGGGAAAAGTAAAGGC TTGTTCGGAAGGCCA TERM 1266 881454 - 881418 - g 73 -2.2 -5.29846 | opp_overlap 881426, overlap 881421 881423 881425 881426 AATGCCAAAGAAAAA CAACACATCCTTGAGC TACAC GCCCAAGGTTATTTAG TGCCGGATATTATGA TERM 1267 881426 - 881446 + G 71 -6.8 -4.00042 | opp_overlap 881426 881425 881423 881421 881418 AGAAAAACAACACAT CCTTGAGC TACAC GCCCAAGG TTATTTAGTGCCGGA HAPS_0894 881196 - 881540 + | putative phage anti-repressor protein HAPS_0895 881545 - 881805 + | hypothetical protein TERM 1268 881878 - 881843 - f 86 -10.7 -3.8046 | gap 1, opp_overlap 881843 GCTAAAAACCGTAAA CTCCTTAGTGAAGTTA AACAA TAACC-CACTAAGGAG TTTTTTATGTCAAAA TERM 1269 881843 - 881878 + F 100 -8.5 -5.36441 | gap 1, opp_overlap 881843 GCTAAAAACCGTAAA CTCCTTAGTGAAGTTA AACAA TAACC-CACTAAGGAG TTTTTTATGTCAAAA HAPS_0896 881885 - 882172 + | hypothetical protein TERM 1270 882271 - 882248 - g 70 -8.9 -3.19936 | AATTACTGAAGTGAA CGATTGGCT AAAACA AGCCAACCG TCAAAAGAAAGCAGG HAPS_0897 882147 - 882302 + | hypothetical protein TERM 1271 882311 - 882328 + T 76 -9.9 -2.94695 | opp_overlap 882313, overlap 882306 TTTATGATGCTCAAT GAGGGTA GAAA TACCCTC TATGATTGCTCCTAG HAPS_0898 882571 - 882287 - | hypothetical protein TERM 1272 882886 - 882846 - g 78 -4.1 -5.32565 | gap 1 GAAGCAATTAAAAAA GCAGAAAAGAGCCAGATT AAATTA AATCAAGCTCTTT-CAGC TCAAAAAAAACACTC HAPS_0899 882615 - 885293 + | possible bacteriophage tail protein/phage tail tape measure protein, TP901 family HAPS_0900 885293 - 886234 + | putative phage P2 GpU/probable bacteriophage V tail protein HAPS_0901 886227 - 886445 + | phage tail fiber-like protein HAPS_0902 886449 - 887501 + | probable bacteriophage regulatory protein TERM 1273 887904 - 887877 - g 71 -7 -4.11394 | gap 1, overlap 887878 887880 ATGTGATTGTTAAAA CCAGCGGT-ACAG TCA CCGTCACCGCTGC TCAGGCAGTGGTGAA TERM 1274 887903 - 887878 - g 75 -10.5 -3.06515 | gap 1, overlap 887877 887880 TGTGATTGTTAAAAC CAGCGGT-ACAG TCA CCGTCACCGCTG CTCAGGCAGTGGTGA HAPS_0903 887516 - 888100 + | possible bacteriophage baseplate protein TERM 1275 888229 - 888195 - g 72 -8.6 -3.60502 | opp_overlap 888191, overlap 888185 ATACACATTGGCAAA TTGCCCCTGAAGGC GTTGAGA GCATTCAGGGGGAA GATGATTTACACCAG TERM 1276 888425 - 888441 + G 89 -4.3 -5.69793 | opp_overlap 888426, overlap 888426 CAAGAAGTGCAAATT AGTGGTG AAG CACCGCA TTTTTTCTTTAATGT TERM 1277 888426 - 888440 + G 75 -7.8 -3.99436 | opp_overlap 888426, overlap 888425 AAGAAGTGCAAATTA GTGGTG AAG CACCGC ATTTTTTCTTTAATG HAPS_0904 888158 - 888526 + | phage baseplate-like protein HAPS_0905 888513 - 889628 + | phage baseplate-like protein HAPS_0906 889621 - 890187 + | putative bacteriophage tail fiber protein HAPS_0907 890211 - 892127 + | putative phage-related tail fiber protein HAPS_0908 892137 - 892703 + | putative tail fiber assembly protein HAPS_0909 892696 - 893175 + | enoyl-CoA hydratase/carnithine racemase-like protein TERM 1278 893365 - 893343 - f 78 -5.7 -5.01811 | gap 1, opp_overlap 893343 TCATTAAATGAAAAA GCGAGAATAA GAAA TTAT-CTCGC TTTTGGGGTTGCGGT HAPS_0910 893489 - 896413 + | phage-related protein, tail component HAPS_0911 896442 - 897233 + | ABC-type antimicrobial peptide transport system, ATPase component TERM 1279 897258 - 897279 + T 81 -3 -5.69262 | CTTAACGCAAAAAAA CTTGATAG AAAAAA CTATCGGG TTTTTCTTTTTCTAA TERM 1280 897549 - 897513 - T 100 -13.9 -4.31397 | opp_overlap 897519, overlap 897519 AGTTTGATAAAATAA GCAAAACCCAGCC TATTTAAAGGT GGCTGGGTTTTGC AAGTGATGTACTAAT TERM 1281 897543 - 897519 - T 73 -5.7 -4.68479 | opp_overlap 897519, overlap 897513 ATAAAATAAGCAAAA CCCAGCC TATTTAAAGGT GGCTGGG TTTTGCAAGTGATGT znuA 898529 - 897573 - | high-affinity zinc transporter periplasmic component TERM 1282 897982 - 897992 + g 75 -5.4 -4.7373 | TTTGCTAAATTCTCT GCAA TTT TTGC TTTTTGCTCAGGTAG TERM 1283 898649 - 898626 - R 100 -8.2 -5.71983 | opp_overlap 898629 TTAATCACAAAAAAA TAAGGACACC CAAA AGCGTCCTTA TAAAACTGACGGTAA pssA 900034 - 898667 - | phosphatidylserine synthase TERM 1284 900128 - 900085 - H 71 -9.1 -3.1552 | overlap 900083 900088 900119 TTCTACGCAGTAACA CTATCCCTACTTTTCTTTG CTTCGC CAAAGAAAAGTAGGCAAAA GAAAGGCGACCCCAA TERM 1285 900125 - 900088 - H 86 -13 -2.77999 | overlap 900085 900083 900119 TACGCAGTAACACTA TCCCTACTTTTCTTTG CTTCGC CAAAGAAAAGTAGGCA AAAGAAAGGCGACCC TERM 1286 900160 - 900119 - H 80 -6.7 -4.86731 | opp_overlap 900141, overlap 900088 900085 900083 CTTCGCCAAAGAAAA GTAGGCAAAAGAAAGGC GACCCCAA GCGTTTCTTCTTCCTAC GCTTGTTGCTAATTT HAPS_0915 900227 - 900442 + | hypothetical protein ileS 903356 - 900540 - | isoleucyl-tRNA synthetase TERM 1287 903327 - 903315 - G 74 -9.1 -3.61178 | opp_overlap 903313 CCCACGCATCGGAAA GCCTG TTT CAGGC AGATTTAATGTGTTT HAPS_0917 904078 - 903416 - | anititoxin/toxin system zeta toxin, signal recognition particle GTPase HAPS_0918 904363 - 904082 - | hypothetical protein ribF 905342 - 904365 - | riboflavin biosynthesis protein TERM 1288 905465 - 905476 + H 100 -3 -6.23545 | TTGCTTGATGTTATA CTTA TGAA TAAG TTTTTTTTATTTAAG purM 905501 - 906535 + | phosphoribosylaminoimidazole synthetase TERM 1289 906669 - 906643 - T 73 -5.9 -4.46212 | gap 1, opp_overlap 906645, overlap 906645 GGTGTTATGAGAAAA TTCTTCCCCTCA TTTA TG-GGGGAAGTA TTGGGAAAGTGGGGG TERM 1290 906679 - 906705 + T 77 -8.1 -3.86015 | gap 1, opp_overlap 906679 906678 906695 906696 906697 GAAGTATTGGGAAAG TGGGGGAGCGAA AAAA TTC-TTCCCCCA TTTATGGGGGAAGTC TERM 1291 906720 - 906695 - T 93 -7.5 -5.08824 | opp_overlap 906679, overlap 906679 906678 906696 906697 GGGGGAGCGAAAAAA TTCTTCCCCCA TTTA TGGGGGAAGTC CCTGAGCGTTAGCGA TERM 1292 906719 - 906696 - T 88 -11 -3.64812 | opp_overlap 906679, overlap 906679 906678 906695 906697 GGGGAGCGAAAAAAT TCTTCCCCCA TTTA TGGGGGAAGT CCCTGAGCGTTAGCG TERM 1293 906718 - 906697 - T 100 -14.5 -2.78405 | opp_overlap 906679, overlap 906679 906678 906696 906695 GGGAGCGAAAAAATT CTTCCCCCA TTTA TGGGGGAAG TCCCTGAGCGTTAGC TERM 1294 906772 - 906819 + T 93 -12.2 -4.19506 | opp_overlap 906777, overlap 906777 AAAATCTGTGAACAA AAAAAGCGGATAGAAGTGTAAA AAAG TTTACACAACTGTCCGCTTTTA TTTTGAGATTGACAT TERM 1295 906777 - 906814 + T 100 -12.1 -5.10163 | opp_overlap 906777, overlap 906772 CTGTGAACAAAAAAA GCGGATAGAAGTGTAAA AAAG TTTACACAACTGTCCGC TTTTATTTTGAGATT TERM 1296 906814 - 906777 - T 100 -9.9 -5.7946 | opp_overlap 906777 906772 CTGTGAACAAAAAAA GCGGATAGAAGTGTAAA AAAG TTTACACAACTGTCCGC TTTTATTTTGAGATT TERM 1297 906826 - 906852 + T 100 -12.5 -5.41746 | CCGCTTTTATTTTGA GATTGACATGA GGTTG TCATGTCAATC TTTTTTTGGGGGATT HAPS_0921 908578 - 906890 - | hypothetical protein TERM 1298 907448 - 907472 + g 72 -9.3 -3.37513 | ATATTTTGCACCTGC GCCATCTTTTG ATA CAGAAGTTGGC TTGCTGTTGCCGTAT HAPS_0922 908810 - 908643 - | hypothetical protein HAPS_0923 909573 - 908983 - | hypothetical protein TERM 1299 909321 - 909347 + g 73 -5.9 -4.59027 | gap 1, opp_overlap 909326 ATGTGCGTCCTGCTA CATCAGTC-GTG GTTG CACTGACAGATG TTTTATCTGCTACTT TERM 1300 910544 - 910515 - g 88 -11.5 -3.53761 | opp_overlap 910495 GAACCTGTTTTTAAA GCCTTTTACACCC GATT GGTTGCAAAAGGC AAAGCGAAGAAAGTC HAPS_0924 909702 - 910673 + | ISNme5, family110 HAPS_0925 910786 - 910664 - | hypothetical protein HAPS_0926 911724 - 910945 - | DNA uptake lipoprotein, TPR repeat-containing protein TERM 1301 911900 - 911886 - g 79 -8.6 -4.11081 | opp_overlap 911886 911885 AAATAACATTACAAA CTGAAG TCA CTTCAG ATTTATTAGGTGCAA rluD 911861 - 912838 + | 23S rRNA pseudouridine synthase D TERM 1302 912872 - 912851 - T 100 -10.9 -5.75599 | TAAATGAGAAAAAAA TCCCCAAAC CTAT GTCTGGGGA TAAAACGAAAAAAGT TERM 1303 912896 - 912886 - T 81 -4 -5.50313 | GATAAAACGAAAAAA GTAT AAA ATAC TTAAAATTTAACCAA TERM 1304 913079 - 913062 - T 100 -8.5 -5.5604 | opp_overlap 913062, overlap 913075 CGAATCAATAAAAAA TGTGCAT TTAA ATGCACA TTTGAAAGATATGCG TERM 1305 913062 - 913079 + T 72 -8.5 -3.56643 | opp_overlap 913062 913075 CGAATCAATAAAAAA TGTGCAT TTAA ATGCACA TTTGAAAGATATGCG bolA 913469 - 913158 - | stress-induced morphogen pflA 913553 - 914140 + | pyruvate formate lyase-activating enzyme 1, putative lipoprotein TERM 1306 914242 - 914211 - f 95 -7.2 -5.38047 | opp_overlap 914216 914217, overlap 914213 914216 CACTTACACAAAAAA TAGTAGGGACGCCA CGCT TGGCGTCCATTCTC TAAATTTGCAAACAG TERM 1307 914240 - 914213 - f 86 -9.8 -4.31943 | opp_overlap 914216 914217, overlap 914211 914216 CTTACACAAAAAATA GTAGGGACGCCA CGCT TGGCGTCCATTC TCTAAATTTGCAAAC TERM 1308 914237 - 914216 - f 77 -10.1 -3.13161 | opp_overlap 914216 914217, overlap 914213 914211 ACACAAAAAATAGTA GGGACGCCA CGCT TGGCGTCCA TTCTCTAAATTTGCA TERM 1309 914216 - 914237 + F 80 -10.1 -3.57797 | opp_overlap 914216 914213 914211, overlap 914217 ACACAAAAAATAGTA GGGACGCCA CGCT TGGCGTCCA TTCTCTAAATTTGCA TERM 1310 914217 - 914236 + F 93 -13.6 -2.74196 | opp_overlap 914216 914213 914211, overlap 914216 CACAAAAAATAGTAG GGACGCCA CGCT TGGCGTCC ATTCTCTAAATTTGC TERM 1311 914290 - 914269 - f 71 -8.7 -3.13177 | opp_overlap 914269 914281 ACAGCTTATATTCAA CGGACGCTA GGCG TAGCGTCCC TACTGTATGAAAAAG TERM 1312 914455 - 914467 + G 77 -7.7 -4.2349 | GAAGATGCCTTTAAC CACGT TGG ACGTG TTTTGCGTATGGGCG HAPS_0931 914377 - 915111 + | hypothetical protein HAPS_0932 915112 - 915669 + | putative transcriptional regulator TERM 1313 915912 - 915925 + G 73 -5.9 -4.55128 | opp_overlap 915920, overlap 915920 AAAAAGTTTGCCAAC CGCCT AAAC GGGCG TTTTAATTTGCCCGT rusA 915669 - 916085 + | holliday junction resolvase-like protein/crossover junction endodeoxyribonuclease dgt 917414 - 916104 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 1314 917556 - 917532 - g 79 -3.6 -5.41746 | AATTCCGCAAAAAAA TCCGCAAAAC CGACC GCTTTACAGA CCTTTCATATCCAAT rumA 917496 - 918806 + | 23S rRNA 5-methyluridine methyltransferase TERM 1315 919237 - 919247 + G 81 -6.8 -4.77157 | opp_overlap 919236, overlap 919232 AACACTAGATGCAAG TGGC CGT GCCA TTTTTAATAAATTAA dppA 919085 - 920680 + | periplasmic dipeptide transport protein DppA TERM 1316 920694 - 920711 + F 95 -11.3 -4.62957 | opp_overlap 920689 AAGGCAACATTGTAG GGTGGGT CTTG ACCCACC TTTTAGTTTAGTTAT TERM 1317 921246 - 921273 + G 77 -9.8 -3.53224 | TTCTTTATTTTTCAA CGCCATTAGGCT TGCC AGCCTCAGGGCG TTTACCAGCAGAATA dppB 920774 - 921778 + | dipeptide transport system permease protein DppB dppC 921807 - 922700 + | dipeptide transport system permease protein DppC TERM 1318 922775 - 922762 - g 73 -2.3 -5.24129 | overlap 922763 TTTGGCGATAAAAAA GCCCC GTTT AGAGC GGTGGATCGAGTAAG dppD 922711 - 923694 + | dipeptide transporter ATP-binding subunit TERM 1319 923752 - 923729 - g 76 -6.6 -4.32951 | overlap 923730 AAACAATACCCAAAA CCCACCGCTT CTCA ATGCGGCGGA TCTCAAAAAATACTA TERM 1320 923998 - 923988 - g 71 -4 -4.83759 | AAGGAAACGGAAAAA TTAC GCC GTAA GAAAATCCAGATCGT dppF 923709 - 924689 + | dipeptide transporter ATP-binding subunit TERM 1321 924716 - 924739 + T 95 -12.6 -4.15066 | TTGTTGTATGCTTTA TTGCCTTACT CTAT AGTAAGGCAA TTTAATTTCTAAATC ruvC 925319 - 924741 - | holliday junction resolvase TERM 1322 925366 - 925334 - R 100 -13 -4.59773 | opp_overlap 925316 925338, overlap 925338 TTTTATGTCCAAAAA TAAAGTGGATTTGT TATTC ACAAACCCACTTTA TAGTCAATCTTAATT TERM 1323 925338 - 925362 + r 71 -7.2 -3.99062 | opp_overlap 925334 925338, overlap 925316 ATGTCCAAAAATAAA GTGGATTTGT TATTC ACAAACCCAC TTTATAGTCAATCTT TERM 1324 925362 - 925338 - R 100 -9.4 -4.86385 | opp_overlap 925316 925338, overlap 925334 ATGTCCAAAAATAAA GTGGATTTGT TATTC ACAAACCCAC TTTATAGTCAATCTT uvrA 925881 - 925393 - | excinuclease ABC subunit A TERM 1325 925953 - 925981 + r 100 -10.5 -5.30199 | opp_overlap 925953 GAAAGTTCAAAAAAA GTAATCTCAAG CTAAATA CTTGAGATTAC TTTTTATTCATTTTT TERM 1326 925981 - 925953 - R 100 -11.2 -5.49809 | opp_overlap 925953 GAAAGTTCAAAAAAA GTAATCTCAAGC TAAAT ACTTGAGATTAC TTTTTATTCATTTTT aspS 926739 - 925999 - | aspartyl-tRNA synthetase TERM 1327 926799 - 926775 - R 85 -7.1 -5.0133 | overlap 926776 926777 TATGTTTTGAAAAAA TCCCCCTCTTT AGC AAAGAGGGGTT AGGAGAGATTTGGCA TERM 1328 926798 - 926776 - R 82 -10.6 -3.60316 | overlap 926775 926777 ATGTTTTGAAAAAAT CCCCCTCTTT AGC AAAGAGGGGT TAGGAGAGATTTGGC TERM 1329 926797 - 926777 - R 100 -14.1 -2.75708 | overlap 926776 926775 TGTTTTGAAAAAATC CCCCTCTTT AGC AAAGAGGGG TTAGGAGAGATTTGG TERM 1330 926867 - 926889 + r 76 -10.6 -2.72459 | overlap 926866 926864 ATCAAATCTCCCCCA GCCCCTCTTT TCT AAAGAGGGGA GTTGCTTGTTAAATA ntpA 927327 - 926878 - | dATP pyrophosphohydrolase TERM 1331 928293 - 928316 + G 76 -4.7 -5.13354 | gap 1, opp_overlap 928278 928305 928306, overlap 928307 928308 TCCTTTCCTTCAGTT GAAGGAAGAA CAGCT TTCT-CCTTC TTTATTTTTTATAAA TERM 1332 928307 - 928344 + G 88 -8.8 -4.77775 | gap 1, opp_overlap 928306 928305, overlap 928293 928308 TGAAGGAAGAACAGC TTTCTCCTTCTTTATTT TTTAT AAATAA-GAAGGAGAAG TTTATTTTGTCACAT TERM 1333 928308 - 928343 + G 79 -10.1 -3.45581 | gap 1, opp_overlap 928306 928305, overlap 928293 928307 GAAGGAAGAACAGCT TTCTCCTTCTTTATTT TTTAT AAATAA-GAAGGAGAA GTTTATTTTGTCACA HAPS_0945 927733 - 928371 + | hypothetical protein folP 928597 - 929376 + | dihydropteroate synthase arsC 929391 - 929738 + | arsenate reductase TERM 1334 929765 - 929739 - f 70 -8.9 -2.97667 | overlap 929736 929741 GTATTTATGAAATGA TACCCAACATA TTAAT TATGTTGAGTA AAAGGGGCAATTTTA coaE 929824 - 930444 + | dephospho-CoA kinase yacG 930448 - 930642 + | putative zinc-binding protein holA 931661 - 930639 - | DNA polymerase III subunit delta TERM 1335 931106 - 931118 + g 71 -6.3 -4.25256 | CAAAACGAAGTTGTA GCATT TGC AATGC TTGTTTTAGTGCCAG TERM 1336 931617 - 931605 - G 72 -3.3 -5.09762 | opp_overlap 931606, overlap 931606 TGTCAATAAATAAAA CGGCT GTA AGCCT TTATTGAGGGCAGGT TERM 1337 931606 - 931616 + g 73 -6.8 -4.15044 | opp_overlap 931606 931605 GTCAATAAATAAAAC GGCT GTA AGCC TTTATTGAGGGCAGG rlpB 932160 - 931666 - | rare lipoprotein B TERM 1338 931918 - 931945 + g 79 -10 -3.57462 | gap 1 TTGTTTAAAGACTGA CGCAACACGAGAG CTA CTTTC-TGTTGCG TTTAAGCGTAAACTC TERM 1339 931992 - 932006 + g 71 -7.2 -3.90112 | TCGGCACGATTTGAA TGTTAC TGA GTAACA TTTGGTTACGCAAAA TERM 1340 932074 - 932088 + g 73 -8.6 -3.74868 | opp_overlap 932074, overlap 932070 ACTCAAGGTACGCAA CTCTTC TGG GAAGAG TTCATTATTTTTAAA TERM 1341 932180 - 932237 + r 79 -10.8 -2.84401 | opp_overlap 932218, overlap 932168 TATTCCTATTTTGTA GGGTGGGTTTTGACCCAGCATATA CGATGTAGAC TAGATGGTGAGTTAAAACCCACCC TACTATTATGCTTTC leuS 934831 - 932243 - | leucyl-tRNA synthetase TERM 1342 933809 - 933795 - G 70 -5.7 -4.35524 | overlap 933796 933798 TGTGCAAATTCAAAA TCACG CTCAT CGTGA GCAGGTACTGCCATT TERM 1343 933956 - 933968 + g 75 -5.5 -4.8143 | GGCAATATCCGCTTC CGCCA CTT TGGTG TTTTTCGCTTCTTGA TERM 1344 934534 - 934545 + g 76 -2.2 -5.42198 | TTTCATAAGTCCATT TTGC TGGT GCAG TTTTATTTTTTACCG HAPS_0953 935071 - 935346 + | transcriptional regulator TERM 1345 935353 - 935370 + F 100 -11.3 -5.07652 | opp_overlap 935352 935351 935353 935355 AAATTTTGAAAAACT GACCGCT TGCA AGCGGTC TTTTGTTTTGAAAAA TERM 1346 935370 - 935353 - f 78 -11.3 -2.6212 | opp_overlap 935353, overlap 935352 935351 935355 AAATTTTGAAAAACT GACCGCT TGCA AGCGGTC TTTTGTTTTGAAAAA TERM 1347 935463 - 935412 - f 84 -12.4 -2.91383 | opp_overlap 935400 935412, overlap 935446 935451 ACCCGTAGGGATACA CTGCGTGTGTCCGCTAAATACCAT CAAT ATAAAATGGAACGGACACACGCAG TGTGTCCCTACGGGA TERM 1348 935471 - 935451 - f 78 -9.7 -3.45381 | opp_overlap 935412, overlap 935412 935446 CAATATAAAATGGAA CGGACACAC GCA GTGTGTCCC TACGGGAATAACATA TERM 1349 937349 - 937337 - g 73 -5.5 -4.55295 | GCGGTGATAAAGAAA TCGCC GAA GGCAA AGTGTCTGTGCGTAC thrS 935536 - 937467 + | threonyl-tRNA synthetase TERM 1350 937498 - 937516 + F 73 -9.6 -2.80016 | opp_overlap 937498, overlap 937494 TAGGAGGCCAATGTA GAGGAGAG TAA TTCTCCTC TCATTACTAATAGGC TERM 1351 937682 - 937695 + F 76 -2.4 -5.51046 | TTTAAATAACCCTTC CAAC CTATTT GTTG TTTTTTCTATATTTA TERM 1352 937768 - 937731 - g 90 -11.5 -4.10657 | gap 1, opp_overlap 937731 GTATATTCTTCAAAA GTGAGCTTAAAGCCTTGT ACT ATAAGGCTTTA-GCCCAC TTTTTACCAACATTG TERM 1353 937731 - 937768 + G 93 -11.5 -4.58283 | gap 1, opp_overlap 937731 GTATATTCTTCAAAA GTGAGCTTAAAGCCTTGT ACT ATAAGGCTTT-AGCCCAC TTTTTACCAACATTG HAPS_0955 937712 - 937867 + | hypothetical protein TERM 1354 938139 - 938118 - T 100 -15.9 -3.13164 | TTGTCAAGGAGTTAA CTTCCCCCG CTTG CGGGGGAAG TGCCCGAGCGAAAGC TERM 1355 940276 - 940261 - T 71 -4.8 -4.66163 | ATGGCGATCTAAAAA TTATCT ATAC AGATAA TTCGCATAACATTAT TERM 1356 940350 - 940324 - T 75 -8.6 -3.54129 | opp_overlap 940324, overlap 940325 GAGATCGTGGTGAAA CTGGCCCTGCGG GTC CAGCAGGTCCAA TTGGTCCAGTGGGTC TERM 1357 940349 - 940325 - T 74 -9.9 -2.72263 | opp_overlap 940324, overlap 940324 AGATCGTGGTGAAAC TGGCCCTGCGG GTC CAGCAGGTCCA ATTGGTCCAGTGGGT TERM 1358 940590 - 940560 - T 78 -11 -2.71144 | overlap 940568 GACCGTGGTGAAGCA GGACCAGAGGGCCC TCA AGGCCCTGCGGGCC CAGCAGGGGCTAAGG TERM 1359 940591 - 940568 - T 75 -10.2 -2.84687 | overlap 940560 TGAAGCAGGACCAGA GGGCCCTCAA GGCC CTGCGGGCCC AGCAGGGGCTAAGGG TERM 1360 940716 - 940704 - T 73 -9.1 -3.45023 | CCAGCAGGACCACAA GACCC TAC GGGTC CAACGGGACCACAAG TERM 1361 940743 - 940731 - T 73 -9.1 -3.42574 | CCAACGGGACCACAA GACCC TGC GGGTC CAACTGGAAATTCGG TERM 1362 941736 - 941766 + T 100 -18.6 -3.62096 | overlap 941736 941739 TTAGAATTTCATGCT CAATGCCATTGTTA TTT TAACAATGGCATTG TTTGGCATAGTAGAC TERM 1363 941739 - 941763 + T 100 -14.5 -3.94634 | overlap 941736 941736 GAATTTCATGCTCAA TGCCATTGTTA TTT TAACAATGGCA TTGTTTGGCATAGTA TERM 1364 941779 - 941831 + T 100 -15.3 -2.65264 | opp_overlap 941779 941781 941786, overlap 941781 941786 TTGTTTGGCATAGTA GACAAAAGTGTTGGTTTTAATTA TTTTTCC TAATTATTACCAACACTTTTGTC TACTATGCCTACTAA TERM 1365 941831 - 941779 - T 100 -15.3 -2.62184 | opp_overlap 941779 941781 941786, overlap 941781 941786 TTGTTTGGCATAGTA GACAAAAGTGTTGGTTTTAATTA TTTTTCC TAATTATTACCAACACTTTTGTC TACTATGCCTACTAA TERM 1366 941781 - 941829 + T 84 -12.1 -2.86728 | opp_overlap 941781 941779 941786, overlap 941779 941786 GTTTGGCATAGTAGA CAAAAGTGTTGGTTTTAATTA TTTTTCC TAATTATTACCAACACTTTTG TCTACTATGCCTACT TERM 1367 941829 - 941781 - T 84 -12.1 -2.85351 | opp_overlap 941779 941781 941786, overlap 941779 941786 GTTTGGCATAGTAGA CAAAAGTGTTGGTTTTAATTA TTTTTCC TAATTATTACCAACACTTTTG TCTACTATGCCTACT TERM 1368 941786 - 941824 + T 76 -6.2 -4.5954 | opp_overlap 941786 941781 941779, overlap 941781 941779 GCATAGTAGACAAAA GTGTTGGTTTTAATTA TTTTTCC TAATTATTACCAACAC TTTTGTCTACTATGC TERM 1369 941824 - 941786 - T 76 -6.2 -4.5954 | opp_overlap 941781 941779 941786, overlap 941781 941779 GCATAGTAGACAAAA GTGTTGGTTTTAATTA TTTTTCC TAATTATTACCAACAC TTTTGTCTACTATGC HAPS_0957 943248 - 941857 - | bifunctional enzyme involved in thiolation andmethylation of tRNA TERM 1370 942312 - 942326 + g 76 -7.2 -4.17958 | opp_overlap 942302, overlap 942302 CGAAATTGACCTGCT CAATGA TTT TCATTG TTTGTTCAAAATCTT TERM 1371 943423 - 943395 - R 89 -6.1 -5.252 | opp_overlap 943400, overlap 943400 CATCGCTATAAAAAA GAAAACCACGA CCAAAAC TCGTGGTTTTT ATTCAAGTAGTGTAA TERM 1372 943418 - 943400 - R 91 -6 -5.49579 | opp_overlap 943400, overlap 943395 CTATAAAAAAGAAAA CCACGA CCAAAAC TCGTGG TTTTTATTCAAGTAG TERM 1373 943400 - 943418 + r 83 -6 -5.08601 | opp_overlap 943400 943395 CTATAAAAAAGAAAA CCACGA CCAAAAC TCGTGG TTTTTATTCAAGTAG crr 943942 - 943439 - | glucose-specific PTS system component TERM 1374 943966 - 944002 + r 90 -11.1 -4.26305 | opp_overlap 943968 943973, overlap 943968 943973 CTCCATTATTAAATG AACAAAATTCTCGCATA TTT TATACGAGAATTTTGTG TTTGTATTCAATTTT TERM 1375 943968 - 944000 + r 100 -13.7 -3.71114 | opp_overlap 943968 943973, overlap 943966 943973 CCATTATTAAATGAA CAAAATTCTCGCATA TTT TATACGAGAATTTTG TGTTTGTATTCAATT TERM 1376 944000 - 943968 - R 100 -15.9 -3.58162 | opp_overlap 943968 943966 943973, overlap 943973 CCATTATTAAATGAA CAAAATTCTCGCATA TTT TATACGAGAATTTTG TGTTTGTATTCAATT TERM 1377 943995 - 943973 - R 100 -10 -4.85545 | opp_overlap 943968 943966 943973, overlap 943968 ATTAAATGAACAAAA TTCTCGCATA TTT TATACGAGAA TTTTGTGTTTGTATT TERM 1378 943973 - 943995 + r 88 -7.8 -4.88684 | opp_overlap 943973 943968, overlap 943968 943966 ATTAAATGAACAAAA TTCTCGCATA TTT TATACGAGAA TTTTGTGTTTGTATT ptsI 945737 - 944016 - | phosphoenolpyruvate-protein phosphotransferase TERM 1379 945604 - 945616 + g 79 -4.9 -5.09426 | GCTTTTTCACGTCCA GTAAA AAA TTTAC TTTTTTCAGATTCAA TERM 1380 945813 - 945784 - R 93 -12.4 -3.86835 | CTAAATAGCACGAAA GACTTTACCATT GAATAA AATGGTAAAGTC ATCAATATCAAAAGG ptsH 946090 - 945833 - | phosphotransferase system, phosphocarrier protein HPr asd 946395 - 947510 + | aspartate-semialdehyde dehydrogenase HAPS_0962 947680 - 947540 - | hypothetical protein TERM 1381 948378 - 948396 + G 73 -10.4 -2.90813 | opp_overlap 948378, overlap 948375 TATATATGGAAATAA TGCCTAAT GAA ATTAGGCA TAGTTTAGGAGAATA TERM 1382 948396 - 948378 - g 86 -10.4 -3.99985 | opp_overlap 948378 948375 TATATATGGAAATAA TGCCTAAT GAA ATTAGGCA TAGTTTAGGAGAATA HAPS_0963 947885 - 949492 + | hypothetical protein TERM 1383 950200 - 950182 - f 73 -6.8 -4.26019 | GAACTATACTGAAAA TGCCAAAA CAA TTTTAGCA TTAAACCACCAATTC TERM 1384 950871 - 950887 + G 71 -6.5 -4.20918 | opp_overlap 950870 950874 GCGTTGCAACCTAAT CGACAAG AGG CTTGCCG TTTGTTGCAATTAGA TERM 1385 951010 - 951020 + G 75 -5.4 -4.74801 | TTAAAGCTCAATACC CTGA TGT TCAG TTTTTAGTGCCGTTG TERM 1386 951409 - 951421 + G 80 -7.7 -4.42788 | opp_overlap 951408 TGGCGAAGAAGAATG CGTTG AAA CAACG TTTTATGGAATTACA lpxB 950343 - 951506 + | lipid-A-disaccharide synthase TERM 1387 951526 - 951510 - T 100 -12.3 -4.87037 | opp_overlap 951510 AATAGAGAGTAAAAA CGGGCAA TTT TTGCCCG TTTTATATAACATCA TERM 1388 951510 - 951526 + T 100 -12.3 -4.54047 | opp_overlap 951510 AATAGAGAGTAAAAA CGGGCAA TTT TTGCCCG TTTTATATAACATCA secF 952510 - 951539 - | preprotein translocase subunit SecF TERM 1389 952261 - 952271 + g 75 -5.4 -4.71186 | TTTGAACTAAAGCAC TGGT ATA ACCA TTTTCTGTTAATACT secD 954332 - 952521 - | preprotein translocase subunit SecD yajC 954687 - 954394 - | preprotein translocase subunit YajC TERM 1390 955046 - 955034 - g 72 -3.3 -5.09426 | opp_overlap 955042, overlap 955035 GCCAATGGTAAAAAA GTCGA TTA TCGCC AATGGCAATCTTCAA HAPS_0969 954893 - 955453 + | possible transcriptional regulator TERM 1391 955485 - 955519 + T 100 -17.4 -4.39448 | opp_overlap 955489, overlap 955489 TGGAGAAAAATGGTG CAAATCGCTTCTAGTG TTA CACTACAAGCGATTTG TTATTTTAATTATTT TERM 1392 955515 - 955489 - T 90 -12.4 -3.61889 | opp_overlap 955489 955485 GAAAAATGGTGCAAA TCGCTTCTAGTG TTA CACTACAAGCGA TTTGTTATTTTAATT TERM 1393 955489 - 955515 + T 100 -12.4 -4.71463 | opp_overlap 955489, overlap 955485 GAAAAATGGTGCAAA TCGCTTCTAGTG TTA CACTACAAGCGA TTTGTTATTTTAATT argG 956872 - 955541 - | argininosuccinate synthase TERM 1394 957030 - 957008 - R 100 -10.7 -5.626 | TAGGTCACAAAAAAA CGGTAAGAT GTATT ATCTTACCG CCTGTAAAATGCATT gpmA 957745 - 957062 - | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase TERM 1395 957331 - 957355 + g 72 -10.1 -2.67958 | opp_overlap 957330, overlap 957336 CATCTTTTGGAAGAT GTGCATAACGA CGG TCGTTATGTGC TGAATTTGGATCTTG kdsB 958672 - 957905 - | 3-deoxy-manno-octulosonate cytidylyltransferase HAPS_0973 959247 - 958681 - | hypothetical protein HAPS_0974 959819 - 959256 - | nitroreductase TERM 1396 959755 - 959774 + g 80 -4.4 -5.26875 | gap 1 TCTAGTTGTTCTGCA TTTGGTACA TCT TG-ACCAAA TTTTTTACTTGAACG TERM 1397 959918 - 959931 + H 70 -2.5 -5.22039 | overlap 959921 AGGAGGATTGGCTAT TTATT TAAA AATAA TTTTTTAGATTTAGC tktA 960216 - 962222 + | transketolase TERM 1398 962243 - 962265 + F 100 -10.7 -5.4387 | opp_overlap 962243 962246 TAGAATGTGGCAAAA TAAGGGGAT TTTAT ATCCCCTTA TTTTTTAGTTTCTAT TERM 1399 962265 - 962243 - f 89 -10.7 -4.12198 | opp_overlap 962243, overlap 962246 TAGAATGTGGCAAAA TAAGGGGAT TTTAT ATCCCCTTA TTTTTTAGTTTCTAT TERM 1400 962262 - 962246 - f 78 -8 -4.18164 | opp_overlap 962243, overlap 962243 AATGTGGCAAAATAA GGGGAT TTTAT ATCCCC TTATTTTTTAGTTTC waaQ 962296 - 963336 + | ADP-heptose--lipooligosaccharide heptosyltransferase III/heptosyltransferase-like protein HAPS_0977 963441 - 963869 + | hypothetical protein TERM 1401 964594 - 964578 - g 71 -5.2 -4.60886 | opp_overlap 964578 ATAGAAGGAAAGAAA TTACCA ATCTA TGGTAA TGGGTTACAAGTTCG rfbB 963987 - 964991 + | dTDP-glucose 4,6-dehydratase HAPS_0979 966013 - 965135 - | hypothetical protein TERM 1402 965896 - 965868 - G 82 -11.1 -3.5936 | opp_overlap 965868 TTTAAATGCTGGAAA GCGGTAAGATCTT GGC AAAAACTTACCGC TTGTTGATGAGGTAG TERM 1403 965868 - 965896 + g 76 -8.9 -3.7282 | opp_overlap 965868 TTTAAATGCTGGAAA GCGGTAAGATCTT GGC AAAAACTTACCGC TTGTTGATGAGGTAG argR 966474 - 966013 - | arginine repressor mdh 966676 - 967620 + | malate dehydrogenase TERM 1404 967680 - 967657 - f 72 -9.6 -2.72649 | opp_overlap 967657, overlap 967656 ACGCCATGATACAAG GGCTGGAAAC TTCA GTTTTCAGCC TTTTTATATACTACT TERM 1405 967657 - 967680 + F 100 -11.8 -5.01497 | opp_overlap 967657 967656 ACGCCATGATACAAG GGCTGGAAAC TTCA GTTTTCAGCC TTTTTATATACTACT HAPS_0982 967709 - 968557 + | thioredoxin-like protein trxB 968596 - 969546 + | thioredoxin reductase igtF 970516 - 969758 - | UDP-glucose--lipooligosaccharideglucosyltransferase involved in cell wall biogenesis rrmJ 970636 - 970950 + | 23S rRNA methyltransferase J TERM 1406 972712 - 972758 + F 78 -3.8 -5.32699 | opp_overlap 972710 972715 972735, overlap 972715 ATAATGCACACCACA CAACGACGCACTGTTGTG AAGTAGTTAAA TTTAACAGTGCGTCGTTC TTTTTTGCTCTTTAA TERM 1407 972715 - 972755 + F 73 -5.5 -4.71318 | opp_overlap 972710 972715 972735, overlap 972712 ATGCACACCACACAA CGACGCACTGTTGTG AAGTAGTTAAA TTTAACAGTGCGTCG TTCTTTTTTGCTCTT TERM 1408 974429 - 974446 + F 70 -9.1 -3.07291 | opp_overlap 974429 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 1409 974848 - 974823 - f 73 -3.3 -5.15167 | opp_overlap 974824, overlap 974824 GAGTAGTAAGAAAAA TCTTGACTG AACAAAAG CAGTCAAGT GTTTAGTAGTTAATA TERM 1410 975208 - 975193 - f 76 -7.6 -4.00323 | GCAAAGACAGAAGAA TTGGCT GGGA AGCCAA GCGACACAGGGTGAT TERM 1411 976306 - 976292 - f 73 -5.7 -4.58213 | TAAGTAACGATAAAA CGAGT GAAAA ACTCG TTCGCCGGAAGACCA TERM 1412 978254 - 978266 + F 71 -4.8 -4.62069 | AGTGCCTTACGAATG TCGG ATTGC CCGA TTTTTGAAATACCAA TERM 1413 979177 - 979204 + G 93 -10.7 -5.08255 | opp_overlap 979177 CTACTTTCTCTATAA CCCCATTATGA AGGTAC TCGTAATGGGG TTTTCTTTTGCCCAT TERM 1414 979204 - 979177 - g 72 -9.2 -3.29144 | opp_overlap 979177 CTACTTTCTCTATAA CCCCATTATGAA GGTA CTCGTAATGGGG TTTTCTTTTGCCCAT HAPS_0991 979103 - 979294 + | hypothetical protein TERM 1415 979335 - 979307 - f 72 -7.5 -3.79177 | TAAAGAACAGAAAGA TGTAGGGGCAAAT TAC ATTTGCCCTTAAA GAACAGAAAAAGAAG TERM 1416 979510 - 979533 + F 100 -9.6 -5.8901 | opp_overlap 979510 TATTAAAGAGAAGAA CCGCAGGTTA GAGA TAGCTTGCGG TTTTTTGTTTTCTGT cyaA 979637 - 982108 + | adenylate cyclase TERM 1417 982163 - 982189 + G 73 -8.8 -3.74713 | opp_overlap 982162 AATTGATTAAAACCG TGGTGTTACTTG CAA CAAGTATTACCA TTGTTCCGCTTTTTA TERM 1418 983224 - 983242 + G 77 -6 -4.57474 | opp_overlap 983224, overlap 983216 GCGACTTTCACAGCA GCAGTGAT TGT ATCAATGC TTTTATCTCCATTGG kefB 982123 - 984057 + | glutathione-regulated potassium-efflux system protein ruvB 984212 - 985138 + | holliday junction DNA helicase B TERM 1419 985142 - 985174 + F 100 -9.3 -5.92399 | opp_overlap 985145, overlap 985145 AAATCTGAATAGTGT AAATCGGTAGAATTT TTA AGGTTCTACCGATTG TTTTTTGTTTTATTC TERM 1420 985145 - 985171 + F 100 -11 -4.94109 | opp_overlap 985145, overlap 985142 TCTGAATAGTGTAAA TCGGTAGAATTT TTA AGGTTCTACCGA TTGTTTTTTGTTTTA oppA 985321 - 986958 + | oligopeptide permease ABC transporter membrane protein TERM 1421 986963 - 987018 + F 74 -2.9 -5.31091 | gap 2, opp_overlap 986985 986987, overlap 986973 TTAAGCAGTAATTTT TAAGCGGTGCGATTTTT--AAAAATCT TTGC AAATTTTGCCAAAAATCGCTCCGCTTG TTTTCTTTTGTTGTG TERM 1422 987086 - 987098 + G 79 -3.3 -5.50723 | opp_overlap 987086 AAAAGGATTTTAGAA GCGAT TCC AACGC TTTTTATTTTAATCA oppB 987053 - 987976 + | ABC-type oligopeptide transport system, periplasmic component TERM 1423 988048 - 988029 - g 70 -3.5 -4.8543 | overlap 988032 GAACTTGCAGAAAAA TTAGCGG AACAGA CCGCTGA AATTGCCGTGGAGGG oppC 987987 - 988907 + | ABC-type oligopeptide transport system, permease components oppD 988919 - 990514 + | ABC transporter, ATP-binding protein TERM 1424 990520 - 990566 + T 73 -6.6 -4.18494 | opp_overlap 990523 GAATTTGTAAATTAG CAAGGCATAGTAGAACAGGGGA ATT TATCTTTTTCTACTATGCCAAG TTTTAGGTAACGGTA oppF 992582 - 990582 - | ABC transporter ATPase component TERM 1425 990820 - 990870 + g 72 -8.3 -3.50047 | gap 1 GAAAGTTTGACCTTC TTCCCCTCTCCCTGCTTGCGGG GGGAGGTG TCCGCAGG-ACGGAGGGGGGCA TTCTCGCTTTCTACA TERM 1426 994422 - 994410 - g 79 -4.8 -5.11937 | overlap 994419 AACAAGTTGAAAAAA TGGC AACGA GCCA ACGGGCGTATCACCA TERM 1427 995448 - 995426 - g 70 -7.7 -3.63073 | overlap 995411 995427 CAGATCTCTCAAGAA CTGGTGGTC GCAAT GACCACCAT CAAAACCCATATACG TERM 1428 995447 - 995427 - g 80 -11.2 -2.77522 | overlap 995411 995426 AGATCTCTCAAGAAC TGGTGGTC GCAAT GACCACCA TCAAAACCCATATAC malT 992834 - 995551 + | ATP-dependent transcriptional regulator HAPS_1002 995757 - 996068 + | dsDNA-mimic protein TERM 1429 996138 - 996177 + T 79 -7.4 -4.46215 | gap 1, opp_overlap 996143 996147, overlap 996134 996147 TCTTTTTAATCTGGA T-ATAATAAAGGCAGCTTT TGA GAAGCTGCCTTTATAGTCA TTATTTTTCGATCTC TERM 1430 996171 - 996143 - T 100 -14.8 -3.50447 | opp_overlap 996138 996134 996147, overlap 996147 TTAATCTGGATATAA TAAAGGCAGCTT TTGAG AAGCTGCCTTTA TAGTCATTATTTTTC TERM 1431 996147 - 996167 + T 93 -11.9 -4.03696 | opp_overlap 996147 996143, overlap 996138 996134 TCTGGATATAATAAA GGCAGCTTT TGA GAAGCTGCC TTTATAGTCATTATT TERM 1432 996167 - 996147 - T 95 -11.2 -4.38927 | opp_overlap 996138 996134 996147, overlap 996143 TCTGGATATAATAAA GGCAGCTT TTGAG AAGCTGCC TTTATAGTCATTATT hemY 997428 - 996178 - | porphoryin biosynthesis protein HemY hemX 998800 - 997439 - | putative uroporphyrin-III C-methyltransferase hemD 999576 - 998818 - | uroporphyrinogen-III synthase hemC 1000507 - 999578 - | porphobilinogen deaminase TERM 1433 1000941 - 1000967 + H 70 -6.7 -4.16301 | CCTTATTGCTTTTCT TTCCTTGTAAG TTATT TTTACGAGGAA TTATTTATGTCAATT alsT 1000974 - 1002362 + | Na+/alanine symporter TERM 1434 1002385 - 1002411 + T 100 -15.3 -4.3767 | opp_overlap 1002385 1002372 AAGTCTTATGTGAAA CGGGCTGTATT AAGGG AATACAGCCCG TTTATTATAATCTAA TERM 1435 1002411 - 1002385 - T 100 -15.3 -3.60475 | opp_overlap 1002385, overlap 1002372 AAGTCTTATGTGAAA CGGGCTGTATT AAGGG AATACAGCCCG TTTATTATAATCTAA ptsB 1003857 - 1002436 - | PTS system sucrose-specific EIIBC component TERM 1436 1005644 - 1005632 - g 81 -2.7 -5.68039 | overlap 1005633 AAACCGATAAAAAAA CCAAA TAT TTTGA AGCCCCTTATGCCGT ptrA 1004173 - 1007115 + | protease III TERM 1437 1007134 - 1007166 + T 93 -12.9 -3.33671 | TTTGTAAGCCTTTAA TGGCACATGTTTGAT TAA GTAAAACATGTGCCA TTGTAAGATAGGTAT HAPS_1010 1007890 - 1007261 - | uncharacterized protein involved in purine metabolism TERM 1438 1007333 - 1007321 - G 79 -3.3 -5.45802 | GCGTGAAAAGAAAAA TTGCC AAC GGCTA CCGCCCATTTGTTGC TERM 1439 1010033 - 1010021 - g 84 -7.7 -4.72986 | GATTTCCACGAAAAA CGTGA TAT TCACG TTCACGTTCCTGAAG lon 1008035 - 1010437 + | ATP-dependent protease LA TERM 1440 1010508 - 1010551 + T 95 -8.4 -5.03314 | gap 1, opp_overlap 1010508 1010509, overlap 1010509 ATTTTCTGCTAAAAA TGGCTTAAAGCCTTGTACTAT ACG GTATTATA-GGCTTTAAGCCG TTTTTTAGCAGTCAC TERM 1441 1010509 - 1010550 + T 80 -9.7 -3.61506 | gap 1, opp_overlap 1010509 1010508, overlap 1010508 TTTTCTGCTAAAAAT GGCTTAAAGCCTTGTACTAT ACG GTATTATA-GGCTTTAAGCC GTTTTTTAGCAGTCA rumB 1011804 - 1010635 - | 23S rRNA methyluridine methyltransferase nagZ 1012819 - 1011797 - | beta-hexosaminidase HAPS_1014 1014640 - 1012841 - | putative ATP-dependent helicase TERM 1442 1014799 - 1014782 - R 73 -7.1 -4.02653 | opp_overlap 1014781 AAGTAACGTAAAGAA TCTTACA TCCA TGTAAGA GATTTAACGATAGTT upp 1015491 - 1014865 - | uracil phosphoribosyltransferase ilvY 1016362 - 1015553 - | DNA-binding transcriptional regulator IlvY TERM 1443 1015878 - 1015866 - G 74 -4.8 -4.66938 | opp_overlap 1015876 ACGGGCAAGATAAAA GGCA TATTC TGCC AATCAATCGGCGTTT lbgB 1017481 - 1016447 - | lipooligosaccharide D-glycero-D-manno-heptosyltransferase TERM 1444 1016731 - 1016743 + g 83 -4.9 -5.28481 | overlap 1016726 TAGGATATTTCTTTG CTAAA GCA TTTAG TTTTTTGATTACATC TERM 1445 1016798 - 1016765 - G 77 -8.3 -3.82665 | opp_overlap 1016767 1016770 1016792, overlap 1016766 1016770 1016790 GATTACATCAGGAAA CCCAAGCAATACTAT ATTC ATAGTATTGCTTGTT AGATAATCTAACAAG TERM 1446 1016797 - 1016766 - G 81 -11.8 -2.89117 | opp_overlap 1016767 1016770 1016792, overlap 1016765 1016770 1016790 ATTACATCAGGAAAC CCAAGCAATACTAT ATTC ATAGTATTGCTTGT TAGATAATCTAACAA TERM 1447 1016767 - 1016796 + g 100 -15.3 -3.11634 | opp_overlap 1016766 1016765 1016770 1016790, overlap 1016770 1016792 TTACATCAGGAAACC CAAGCAATACTAT ATTC ATAGTATTGCTTG TTAGATAATCTAACA TERM 1448 1016770 - 1016793 + g 88 -11.2 -3.70109 | opp_overlap 1016770 1016766 1016765 1016790, overlap 1016767 1016792 CATCAGGAAACCCAA GCAATACTAT ATTC ATAGTATTGC TTGTTAGATAATCTA TERM 1449 1016793 - 1016770 - G 85 -11.2 -3.31415 | opp_overlap 1016767 1016770 1016792, overlap 1016766 1016765 1016790 CATCAGGAAACCCAA GCAATACTAT ATTC ATAGTATTGC TTGTTAGATAATCTA TERM 1450 1016792 - 1016814 + g 100 -13.6 -4.92314 | opp_overlap 1016770 1016766 1016765 1016790, overlap 1016770 1016767 TATATTCATAGTATT GCTTGTTAGA TAA TCTAACAAGC TTTTTATAGATTCAT TERM 1451 1017483 - 1017498 + r 70 -3.4 -5.0666 | GATTTTATGCTCATT TATAAT CTCT ATTATA TTTGTTTTTTAAATA HAPS_1018 1017645 - 1017478 - | hypothetical protein HAPS_1019 1018556 - 1017621 - | ADP-heptose:LPS heptosyltransferase lbgA 1019257 - 1018583 - | lipooligosaccharide galactosyltransferase I HAPS_1021 1020405 - 1019260 - | glycosyl transferase, group 1 HAPS_1022 1021567 - 1020395 - | glycosyl transferase, group 1 lpsA 1022362 - 1021571 - | lipooligosaccharide biosynthesis protein lpsA HAPS_1024 1022963 - 1022586 - | hypothetical protein HAPS_1025 1023106 - 1022960 - | hypothetical protein TERM 1452 1023178 - 1023195 + r 89 -11.3 -4.08064 | opp_overlap 1023178 TTTAGGCATAAAAAA CCTCCAC TATT GTGGAGG TTTTCCCGAAAAATT TERM 1453 1023195 - 1023178 - R 100 -11.3 -5.28176 | opp_overlap 1023178 TTTAGGCATAAAAAA CCTCCAC TATT GTGGAGG TTTTCCCGAAAAATT rpmE 1023428 - 1023216 - | 50S ribosomal protein L31 TERM 1454 1023525 - 1023510 - H 100 -9 -5.84381 | GTATGAATAAAAAAA CTAGGC AGAA GCCTAG CACCAAAAAGAGTGA HAPS_1027 1023687 - 1024784 + | ISAma3, family ISAs1 TERM 1455 1024982 - 1024999 + G 72 -3.3 -5.00884 | opp_overlap 1024983, overlap 1024983 AAACGAGCAAAAATT ATGGCGG AGAT CCGTCAA TTTTTTACGGAACGT genX 1024982 - 1025887 + | lysyl-tRNA synthetase TERM 1456 1026108 - 1026096 - g 76 -9.1 -3.69621 | overlap 1026090 ATCGACAATGCCAAA GCACG TGG CGTGC AACAGATGATCTCGA TERM 1457 1026452 - 1026476 + G 74 -9.3 -3.53444 | ACAAGGGAATGCCGA GCAGTGTGGCG GTG TGTTACACTGC TTTACAGAAGACTGG tatD 1025997 - 1026779 + | putative Mg-dependent DNAse HAPS_1030 1026919 - 1027344 + | hypothetical protein TERM 1458 1027377 - 1027345 - f 86 -10 -4.03811 | gap 1, opp_overlap 1027345, overlap 1027349 1027352 GATAGTAGCAAATAA TGAATAAGGACGCCA AGCG TGGCGTCCCTAC-CA TTCTTCAATTCACCT TERM 1459 1027374 - 1027349 - f 100 -14.1 -3.63839 | opp_overlap 1027345, overlap 1027345 1027352 GTAGCAAATAATGAA TAAGGACGCCA AGCG TGGCGTCCCTA CCATTCTTCAATTCA TERM 1460 1027371 - 1027352 - f 100 -13.6 -3.93237 | opp_overlap 1027345, overlap 1027349 1027345 GCAAATAATGAATAA GGACGCCA AGCG TGGCGTCC CTACCATTCTTCAAT TERM 1461 1027558 - 1027537 - g 79 -5.1 -5.00895 | opp_overlap 1027538 1027540, overlap 1027538 TTTATGACAGAAAAA GCACCGCTT GCTG AAGCAGTGT ATATCTTAGGGGATC TERM 1462 1027557 - 1027538 - g 72 -8.6 -3.59814 | opp_overlap 1027538 1027540, overlap 1027537 TTATGACAGAAAAAG CACCGCTT GCTG AAGCAGTG TATATCTTAGGGGAT TERM 1463 1027647 - 1027667 + G 72 -9.7 -2.95538 | overlap 1027646 1027649 CGCTATTCGTCAGCT CACGGATCA GGG TGTTCCGTG CTATTTTATTCACGG TERM 1464 1028133 - 1028153 + G 78 -3.9 -5.3104 | overlap 1028134 1028135 AAAAACTGCGTCAAT TTTAGCGGT ATC ACCGCAAGG TTTTGTTTTTAATGA lpxH 1027450 - 1028178 + | UDP-2,3-diacylglucosamine hydrolase TERM 1465 1028869 - 1028858 - g 75 -5.8 -4.68724 | TCACGGAAGAGAAAA TGGC TCAA GCCA ATGCGGTGACAGACA vimF 1028179 - 1028979 + | glycosyltransferases involved in cell wall biogenesis spoT 1030945 - 1028987 - | guanosine polyphosphate pyrophosphohydrolase/synthetase TERM 1466 1031149 - 1031187 + G 100 -19.2 -4.58685 | opp_overlap 1031149 ATGTATAACGAAAAA TGGACAATGAAAAGGG CAAATCA CCCTTTTCATTGTCCA TTTTTAACGAAATTT TERM 1467 1031187 - 1031149 - g 100 -20.6 -4.93968 | opp_overlap 1031149 ATGTATAACGAAAAA TGGACAATGAAAAGGGCA AAT CACCCTTTTCATTGTCCA TTTTTAACGAAATTT HAPS_1034 1031134 - 1031247 + | hypothetical protein rpoZ 1031491 - 1031210 - | DNA-directed RNA polymerase subunit omega TERM 1468 1031814 - 1031834 + r 77 -9.7 -3.19602 | opp_overlap 1031814, overlap 1031812 TTGAATCAAAGAAAA GCCCCGA TTATATT TCGGGGC TGTTAATCTAAAGAA TERM 1469 1031834 - 1031814 - R 100 -9.7 -4.99947 | opp_overlap 1031812 1031814 TTGAATCAAAGAAAA GCCCCGA TTATATT TCGGGGC TGTTAATCTAAAGAA talB 1032803 - 1031853 - | transaldolase B ampG 1034189 - 1032918 - | permease and signal transducer AmpG TERM 1470 1033153 - 1033141 - G 70 -5.5 -4.4195 | overlap 1033143 ATATAGGCGACAAAA CAGGC TGT GCCTA AGCCAATTCCGATAT galE 1035208 - 1034192 - | UDP-glucose-4-epimerase TERM 1471 1034449 - 1034461 + g 82 -6.3 -4.86033 | AGACGTGGAAACCTG CATCA TCT TGATG TTTTTCTAAGGCTTT TERM 1472 1034795 - 1034808 + g 76 -6.7 -4.44046 | opp_overlap 1034794 ACCGACTTCACAAGC TTCCG TAAT CGGAA TTTCTTTCGGATCGC rluB 1035935 - 1035273 - | pseudouridylate synthase HAPS_1040 1036098 - 1036427 + | hypothetical protein TERM 1473 1036451 - 1036471 + F 75 -9.7 -2.92896 | opp_overlap 1036451 1036454, overlap 1036446 1036455 TTAATCACTTTAAAA GTAGGGGCA AAT TGCCCTTGC TACTATTTATATCAT TERM 1474 1036455 - 1036467 + F 73 -9.1 -3.31691 | opp_overlap 1036454 1036451, overlap 1036451 1036446 TCACTTTAAAAGTAG GGGCA AAT TGCCC TTGCTACTATTTATA recR 1036494 - 1037099 + | recombination protein RecR pyrG 1037210 - 1038844 + | CTP synthetase TERM 1475 1038905 - 1038848 - T 84 -12.3 -2.7563 | opp_overlap 1038853 1038863 AAAAATGCTTAATGA TTTTAGGGCATAGTAGACAAAATGG TTGCTATG CCCTTTTGTCTACTATGCCGCCAAA TTCCCCTCTAAAAGT TERM 1476 1038853 - 1038883 + T 95 -11.2 -4.5954 | opp_overlap 1038848, overlap 1038863 TGCTTAATGATTTTA GGGCATAGTAGACA AAA TGGTTGCTATGCCC TTTTGTCTACTATGC TERM 1477 1038948 - 1038906 - T 75 -8.7 -3.54741 | TACTATGCCGCCAAA TTCCCCTCTAAAAGTCA TTTTTCTTT CAACTTTTAGAGGGAAA ACAACAGCTAGTATA serA 1040188 - 1038956 - | D-3-phosphoglycerate dehydrogenase TERM 1478 1040047 - 1040065 + g 100 -11.8 -5.36965 | opp_overlap 1040047 1040044 TGATCGCATCAATTA GCTCTTGA CCA TCAAGAGC TTTTTTATGGTATTC TERM 1479 1040065 - 1040047 - G 81 -11.8 -2.78547 | opp_overlap 1040047, overlap 1040044 TGATCGCATCAATTA GCTCTTGA CCA TCAAGAGC TTTTTTATGGTATTC rpiA 1040910 - 1040251 - | ribose-5-phosphate isomerase A TERM 1480 1041008 - 1040957 - R 79 -5.2 -5.07567 | opp_overlap 1040958, overlap 1040960 TTATAGTTTAAAAAA GAACAAGCGGTAAGATCCTTACAA AATT TTGTTGAAATCTTACCGCTTGCGA TTAGTTACGTTTCAC TERM 1481 1041005 - 1040960 - R 100 -13.5 -4.63089 | opp_overlap 1040958, overlap 1040957 TAGTTTAAAAAAGAA CAAGCGGTAAGATCCTTACAA AATT TTGTTGAAATCTTACCGCTTG CGATTAGTTACGTTT mrsA 1042343 - 1041009 - | phosphoglucosamine mutase ilvA 1043876 - 1042350 - | threonine dehydratase TERM 1482 1043762 - 1043772 + g 79 -6.8 -4.5366 | opp_overlap 1043762 1043761 TATGATTACCCAAAC GCTC TGA GAGC TTTTCCATTTTTTGC TERM 1483 1043853 - 1043831 - G 85 -9.1 -4.16943 | opp_overlap 1043829 1043832, overlap 1043832 TTTTAGAGCTTAAAA TGGCACGGA GGTAA TCCGTGCCT GATTGTAATGGGGTA TERM 1484 1043852 - 1043832 - G 85 -12.6 -3.09844 | opp_overlap 1043832 1043829, overlap 1043831 TTTAGAGCTTAAAAT GGCACGGA GGTAA TCCGTGCC TGATTGTAATGGGGT TERM 1485 1043832 - 1043852 + g 83 -12.6 -2.86449 | opp_overlap 1043831 1043832, overlap 1043829 TTTAGAGCTTAAAAT GGCACGGA GGTAA TCCGTGCC TGATTGTAATGGGGT slyD 1044461 - 1043895 - | FkbP-type peptidyl-prolyl cis-trans isomerase TERM 1486 1044568 - 1044543 - R 100 -12.7 -4.71828 | opp_overlap 1044542 1044541 ATGTTAGTAACAAAA TGACCGCTTAT TCTT ACAAGCGGTCA AATTTTGCAATTAAT HAPS_1048 1044719 - 1044579 - | hypothetical protein HAPS_1049 1045432 - 1044728 - | periplasmic/secreted protein HAPS_1050 1046221 - 1045484 - | potassium-tellurite ethidium and proflavin transporter menA 1046341 - 1047231 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase HAPS_1052 1047427 - 1047266 - | hypothetical protein lpxK 1048430 - 1047408 - | tetraacyldisaccharide 4'-kinase hugX 1049117 - 1049512 + | heme utilization protein HuvX TERM 1487 1049697 - 1049669 - g 79 -9.7 -3.72027 | opp_overlap 1049678 ATTTGTGATCAATAA TGGTGAATATCAA GTA TTGATTTCCACCA TTGCCCGCCACGCAC hugZ 1049526 - 1050065 + | heme utilization protein TERM 1488 1050116 - 1050068 - T 100 -22.1 -4.48877 | opp_overlap 1050068 1050070 1050073, overlap 1050070 GAAAGAGGCATAAAA CACAAGCGGTCAGTTACAGTAAA TCC TTTACCATAACTGACCGCTTGTC TATTGATGGAAACTA TERM 1489 1050068 - 1050116 + T 100 -17.7 -3.1372 | opp_overlap 1050068 1050070, overlap 1050070 1050073 GAAAGAGGCATAAAA CACAAGCGGTCAGTTACAGTAAA TCC TTTACCATAACTGACCGCTTGTC TATTGATGGAAACTA TERM 1490 1050114 - 1050070 - T 100 -24.7 -3.83791 | opp_overlap 1050068 1050070 1050073, overlap 1050068 AAGAGGCATAAAACA CAAGCGGTCAGTTACAGTAAA TCC TTTACCATAACTGACCGCTTG TCTATTGATGGAAAC TERM 1491 1050070 - 1050114 + T 100 -20.3 -3.12895 | opp_overlap 1050070 1050068, overlap 1050068 1050073 AAGAGGCATAAAACA CAAGCGGTCAGTTACAGTAAA TCC TTTACCATAACTGACCGCTTG TCTATTGATGGAAAC TERM 1492 1050073 - 1050111 + T 100 -16.2 -3.70722 | opp_overlap 1050070 1050068, overlap 1050070 1050068 AGGCATAAAACACAA GCGGTCAGTTACAGTAAA TCC TTTACCATAACTGACCGC TTGTCTATTGATGGA glpK 1051637 - 1050129 - | glycerol kinase glpF 1052424 - 1051711 - | glycerol uptake facilitator protein TERM 1493 1051962 - 1051950 - G 70 -3.5 -4.98531 | overlap 1051955 CCGTTAAAGCAAAAA TTAAT GCC ATTAA TACGGCGGTAATCAC TERM 1494 1052535 - 1052552 + r 81 -4.2 -5.40072 | opp_overlap 1052535, overlap 1052550 CGATTAAATGAAAAT TTGTGA AGTTGC TCACAA TTTTTTTAAAAAAGA wecG 1053339 - 1052617 - | putative UDP-N-acetyl-D-mannosaminuronic acid transferase, teichoic acid biosynthesis protein HAPS_1060 1054591 - 1053332 - | putative enterobacterial common antigen polymerase wecF 1055801 - 1054632 - | 4-alpha-L-fucosyltransferase pbpB 1055944 - 1058328 + | penicillin-binding protein 1B (PBP1b) artM 1059090 - 1058407 - | arginine transporter permease subunit ArtM artQ 1059719 - 1059090 - | arginine transporter permease subunit ArtQ TERM 1495 1059730 - 1059701 - G 75 -8 -4.07859 | gap 1 GCAATAAAGAGCAAA CTGCCAACCCTAA GGTCA TTAGGGCT-GCAG AATACAATAGAGGAA TERM 1496 1059782 - 1059792 + r 70 -2.6 -5.1861 | TTATTTAGTCATCCA TTTA TCA TAAA TTTTTTGGTACTCAC artI 1060492 - 1059767 - | ABC-type amino acid transport/signal transduction systems, periplasmic component/domain TERM 1497 1060471 - 1060483 + g 75 -2.7 -5.1861 | TTGCGGCTAAAACGG TTGCT AAA AGTAA TTTTTTCATAGTAAC artP 1061258 - 1060524 - | ABC-type arginine transport system, ATPase component uvrD 1061432 - 1063615 + | DNA-dependent helicase II TERM 1498 1063652 - 1063609 - T 100 -14.8 -4.14392 | opp_overlap 1063620, overlap 1063620 GGCGAAGTTGGAAAA GATGTAAAAAATCCCCAACC AAAT GGCTGGGGATTTTTTACTTT AATCGTAAATTACTC TERM 1499 1063641 - 1063620 - T 100 -12.3 -5.19916 | opp_overlap 1063620, overlap 1063609 AAAAGATGTAAAAAA TCCCCAACC AAAT GGCTGGGGA TTTTTTACTTTAATC TERM 1500 1063620 - 1063641 + T 100 -10.1 -5.40004 | opp_overlap 1063609 1063620 AAAAGATGTAAAAAA TCCCCAACC AAAT GGCTGGGGA TTTTTTACTTTAATC rplI 1064111 - 1063662 - | 50S ribosomal protein L9 TERM 1501 1063990 - 1064006 + g 71 -7.3 -3.80893 | opp_overlap 1063975 TGAGCAATGTTTGCT GCAGTTG CCA TAACTGC TTTACCTTGTGGGAT rpsR 1064357 - 1064130 - | 30S ribosomal protein S18 priB 1064695 - 1064369 - | primosomal replication protein N rpsF 1065062 - 1064682 - | 30S ribosomal protein S6 TERM 1502 1065296 - 1065258 - H 78 -3.6 -5.24989 | gap 1, opp_overlap 1065251 TTAGATATTAAAAAA TTTTTATCCT-TTTTTA GCATGG TAAAAACAGAATAAAAA AACTAATTTATCTAA HAPS_1072 1065460 - 1066779 + | metabolite transport protein licA 1067586 - 1066804 - | predicted choline kinase involved in LPS biosynthesis TERM 1503 1066849 - 1066831 - G 91 -8.2 -5.2112 | AATAGTATCAAAAAA GTGGCTTA ATC TAAACCAC AACCTATTCAACTTC HAPS_1074 1067954 - 1067586 - | periplasmic lipoprotein TERM 1504 1067630 - 1067653 + g 70 -8.2 -3.74238 | opp_overlap 1067648, overlap 1067648 AGTTTGCACTTTCAG GGGTTGGTTT GTCT AAAGCAACCC TTTGGCGTTGTTTAG HAPS_1075 1068315 - 1067956 - | HIT-like protein/diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases HAPS_1076 1068342 - 1068467 + | hypothetical protein HAPS_1077 1068726 - 1069823 + | ISAma3, family ISAs1 TERM 1505 1070439 - 1070419 - T 78 -9.7 -3.41051 | TCATTTGCATGACAA CGGGCAC ATTACGA GTGCCCG AAAATAATTGCAGGA TERM 1506 1070478 - 1070447 - T 70 -6.6 -4.17316 | opp_overlap 1070456, overlap 1070456 AGTGCCCGAAAATAA TTGCAGGAACGCCA CGCT TGGCGTTCATAGAA ACATTAATTTTACCG orfG 1071097 - 1070513 - | putative DNA uptake protein, cytoplasmic protein TERM 1507 1071308 - 1071318 + H 73 -5.4 -4.56117 | overlap 1071306 AAAAGTGTGTTTTCA GGTA GAA TACC TTGTTTATTTTTATC TERM 1508 1071436 - 1071456 + H 86 -8.3 -4.40561 | opp_overlap 1071435, overlap 1071433 1071437 CTACGCTCAATGTAG CGATTGCAG TTT CTGCAATCA TTCTTTTTAACCCAA TERM 1509 1071437 - 1071455 + H 84 -11.8 -3.23855 | opp_overlap 1071435, overlap 1071436 1071433 TACGCTCAATGTAGC GATTGCAG TTT CTGCAATC ATTCTTTTTAACCCA TERM 1510 1071570 - 1071554 - g 70 -9.5 -2.61216 | opp_overlap 1071557, overlap 1071557 TGAGCAAGTAATCCA TAACGGT AAT ACCGTTA ATGAAGTTGCTGTGC TERM 1511 1072019 - 1072039 + G 79 -6.9 -4.49556 | opp_overlap 1071999, overlap 1071999 1072020 ACAAGATTTTGTTGA TGGTTTAAC GGT GTTAAGCCG TTTATTTGATGGACA nqrA 1071492 - 1072838 + | Na(+)-translocating NADH-quinone reductase subunit A nqrB 1072843 - 1074081 + | Na(+)-translocating NADH-quinone reductase subunit B nqrC 1074074 - 1074850 + | Na(+)-translocating NADH-quinone reductase subunit C nqrD 1074850 - 1075473 + | Na(+)-translocating NADH-quinone reductase subunit D nqrE 1075475 - 1076071 + | Na(+)-translocating NADH-quinone reductase subunit E TERM 1512 1076231 - 1076219 - g 70 -3.4 -4.88736 | opp_overlap 1076228 GATGATCCAGAAAAA GCAA TTACC TTGC CAGCTGGCGGTAAAT nqrF 1076084 - 1077316 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 1513 1077326 - 1077373 + F 73 -9.2 -2.91593 | opp_overlap 1077327 1077331 1077352, overlap 1077327 GGCTAATCAGCTATA ATCAAGCGGTCGGATTTGCAAA AAAA TATGCGGATCTGACCGCTTAAG ATTTATAGGAAAGTA TERM 1514 1077372 - 1077327 - f 70 -8.3 -3.39595 | opp_overlap 1077326 1077327, overlap 1077331 1077352 GCTAATCAGCTATAA TCAAGCGGTCGGATTTGCAAA AAAA TATGCGGATCTGACCGCTTAA GATTTATAGGAAAGT TERM 1515 1077371 - 1077352 - f 76 -3.5 -5.42259 | opp_overlap 1077326 1077327, overlap 1077331 1077327 GGATTTGCAAAAAAA TATGCGG ATCTGA CCGCTTA AGATTTATAGGAAAG HAPS_1085 1077397 - 1077825 + | nucleotidyltransferase, inorganic polyphosphate/ATP-NAD kinase dnaN 1077822 - 1078121 + | DNA polymerase beta subunit thiP 1079695 - 1078118 - | thiamine transporter membrane protein TERM 1516 1078288 - 1078268 - G 72 -3.3 -5.14965 | AGGGCTACCAAAAAA GGCAATC ACGGAAA AATTGCC TAGACTTGCCGACAT TERM 1517 1078554 - 1078541 - G 81 -6.7 -4.78107 | GATCAGCAGTAAAAA TAGCC CAAC GGCTA ACATAAATATCGGCA TERM 1518 1079133 - 1079143 + g 76 -6.8 -4.34402 | GTCGCATAGGCATAG GGCA AAA TGCC TTTTAATATCGGCAA TERM 1519 1080053 - 1080031 - g 72 -3.5 -5.15117 | gap 1, opp_overlap 1080033, overlap 1080021 1080033 TAAAATGTTAAAAAA CAGCC-TTGT TGCG ACAATGGCTA TGTTGGGGTGTTTCC nrfA 1080020 - 1081459 + | cytochrome c nitrite reductase nrfB 1081480 - 1082103 + | cytochrome c-type protein NrfB nrfC 1082100 - 1082777 + | nitrate reductase nrfD 1082777 - 1083730 + | nitrate reductase, transmembrane protein TERM 1520 1083738 - 1083784 + F 100 -16.7 -5.50499 | opp_overlap 1083742, overlap 1083739 TTGCTTAATCTCCTC ACAAGCGGGCAGATCTTGCAA ATTTA TCGCAAAATCTGCCCGCTTGC TTTTTTTCAATATCG TERM 1521 1083739 - 1083783 + F 100 -20.2 -3.89215 | opp_overlap 1083742, overlap 1083738 TGCTTAATCTCCTCA CAAGCGGGCAGATCTTGCAA ATTTA TCGCAAAATCTGCCCGCTTG CTTTTTTTCAATATC TERM 1522 1083780 - 1083742 - f 100 -20.5 -3.30159 | opp_overlap 1083739 1083738 TTAATCTCCTCACAA GCGGGCAGATCTTGCAA ATTTA TCGCAAAATCTGCCCGC TTGCTTTTTTTCAAT HAPS_1092 1083840 - 1084628 + | glycosyltransferase TERM 1523 1084668 - 1084642 - f 75 -9.6 -3.20345 | opp_overlap 1084641 1084632 1084642, overlap 1084640 AATCTGATATTAAGA GGCATAGTAA ACAAAAG TTACTATGCC ATATTGGTGTCTTAA TERM 1524 1084642 - 1084668 + F 71 -9.6 -2.54803 | opp_overlap 1084642 1084640, overlap 1084641 1084632 AATCTGATATTAAGA GGCATAGTAA ACAAAAG TTACTATGCC ATATTGGTGTCTTAA TERM 1525 1086138 - 1086195 + G 93 -10.9 -5.07523 | opp_overlap 1086142 1086145 1086150 1086156, overlap 1086141 1086142 GACTCTCAATATGGG CAAACAACACAACATAAAGTAAATGAA TTAT TTCATTTGCTTTATGGTGAGTTGATTA TTTTATTTATGTCTG TERM 1526 1086141 - 1086192 + G 100 -12.6 -4.60302 | opp_overlap 1086142 1086145 1086150 1086156, overlap 1086138 1086142 TCTCAATATGGGCAA ACAACACAACATAAAGTAAATGAA TTAT TTCATTTGCTTTATGGTGAGTTGA TTATTTTATTTATGT TERM 1527 1086142 - 1086191 + G 100 -16.1 -3.33741 | opp_overlap 1086142 1086145 1086150 1086156, overlap 1086141 1086138 CTCAATATGGGCAAA CAACACAACATAAAGTAAATGAA TTAT TTCATTTGCTTTATGGTGAGTTG ATTATTTTATTTATG TERM 1528 1086191 - 1086142 - g 95 -13.9 -3.6106 | opp_overlap 1086141 1086138 1086142, overlap 1086145 1086150 1086156 CTCAATATGGGCAAA CAACACAACATAAAGTAAATGAA TTAT TTCATTTGCTTTATGGTGAGTTG ATTATTTTATTTATG TERM 1529 1086188 - 1086145 - g 83 -9.8 -3.93658 | opp_overlap 1086142 1086141 1086138, overlap 1086142 1086150 1086156 AATATGGGCAAACAA CACAACATAAAGTAAATGAA TTAT TTCATTTGCTTTATGGTGAG TTGATTATTTTATTT TERM 1530 1086183 - 1086150 - g 90 -11.3 -3.90464 | opp_overlap 1086142 1086141 1086138, overlap 1086145 1086142 1086156 GGGCAAACAACACAA CATAAAGTAAATGAA TTAT TTCATTTGCTTTATG GTGAGTTGATTATTT aphA 1085685 - 1086350 + | AphA-like protein/membrane protein affecting hemolysin expression TERM 1531 1086549 - 1086529 - g 77 -6.2 -4.59069 | gap 1, opp_overlap 1086527 1086529 AGTAGAACTAGAAAA TGGGCATGT TGTA ACA-GCCCA TATTTCAGGAAAAAT infA 1086446 - 1086664 + | translation initiation factor IF-1 TERM 1532 1086707 - 1086677 - f 84 -12.1 -2.92389 | opp_overlap 1086667 1086683, overlap 1086683 TAATTGAGGTATACA TAAAAATGGAAGC GTCTA GCTCCCATTTTTA TGGTCAGCTCTCGGT TERM 1533 1086683 - 1086701 + F 74 -4.5 -4.91511 | opp_overlap 1086683 1086677, overlap 1086667 AGGTATACATAAAAA TGGAAGC GTCTA GCTCCCA TTTTTATGGTCAGCT TERM 1534 1086701 - 1086683 - f 82 -6.7 -5.04597 | opp_overlap 1086667 1086683, overlap 1086677 AGGTATACATAAAAA TGGAAGC GTCTA GCTCCCA TTTTTATGGTCAGCT engC 1086850 - 1087782 + | ribosome-associated GTPase TERM 1535 1087823 - 1087788 - f 80 -6.2 -5.06116 | opp_overlap 1087792, overlap 1087792 AAAAGAATAATAAAA TCAACGGGTTGCTA GATAAAAA TAGCAACCCGTTCT CATTTTTAATACTTA TERM 1536 1087792 - 1087819 + F 91 -11.4 -3.77111 | opp_overlap 1087792 1087788 GAATAATAAAATCAA CGGGTTGCTA GATAAAAA TAGCAACCCG TTCTCATTTTTAATA TERM 1537 1087819 - 1087792 - f 91 -11.4 -3.87952 | opp_overlap 1087792, overlap 1087788 GAATAATAAAATCAA CGGGTTGCTA GATAAAAA TAGCAACCCG TTCTCATTTTTAATA TERM 1538 1087989 - 1088004 + G 81 -2.6 -5.53991 | gap 1 ATGAAAAAATTAGCA GCACTAC TTA GTA-TGC TTTTTTTGGTAAGTA yfeA 1087974 - 1088852 + | chelated iron ABC transporter, periplasmic-binding protein TERM 1539 1088861 - 1088883 + F 83 -12 -2.64472 | opp_overlap 1088859, overlap 1088858 1088858 AAAATAAAACGATTT GGGCGAACTG CTT TGGTTCGCCC TGCATTTACAAAATA yfeB 1088915 - 1089676 + | chelated iron ABC transporter, ATP-binding protein yfeC 1089680 - 1090552 + | chelated iron ABC transporter, permease yfeD 1090552 - 1091391 + | chelated iron ABC transporter, permease TERM 1540 1091420 - 1091447 + T 91 -10 -4.46976 | opp_overlap 1091414 TTTAATCTATGTTAA GTCCCTAGAT AGCAAATC ATCTAGGGAC TTTATCTTTATTAAT HAPS_1101 1091875 - 1091462 - | hypothetical protein TERM 1541 1092904 - 1092881 - H 78 -8.8 -3.72989 | opp_overlap 1092881 AAAGTTATATTCAAA CCTAGCACGC AAAT GCGAACTAGG TTTAACTGCTCAAAG HAPS_1104 1093171 - 1093512 + | XRE family transcriptional regulator TERM 1542 1093663 - 1093630 - T 79 -11.3 -3.0264 | gap 1, opp_overlap 1093631 1093638, overlap 1093633 1093635 1093638 AAATTTTTTCCAATA TTACATAATCCACTGA TTA CCAGTGGATTATG-AA TTGAATTACACGGTA TERM 1543 1093631 - 1093663 + T 87 -12.2 -3.17392 | opp_overlap 1093630 1093633 1093635 1093638, overlap 1093638 AATTTTTTCCAATAT TACATAATCCACTG ATTAC CAGTGGATTATGAA TTGAATTACACGGTA TERM 1544 1093661 - 1093633 - T 100 -15.5 -2.73875 | opp_overlap 1093631 1093638, overlap 1093630 1093635 1093638 TTTTTTCCAATATTA CATAATCCACTGA TTA CCAGTGGATTATG AATTGAATTACACGG TERM 1545 1093659 - 1093635 - T 84 -12.3 -2.9155 | opp_overlap 1093631 1093638, overlap 1093633 1093630 1093638 TTTTCCAATATTACA TAATCCACTGA TTA CCAGTGGATTA TGAATTGAATTACAC TERM 1546 1093638 - 1093656 + T 73 -8.9 -3.43564 | opp_overlap 1093635 1093633 1093630 1093638, overlap 1093631 TCCAATATTACATAA TCCACTG ATTAC CAGTGGA TTATGAATTGAATTA TERM 1547 1093656 - 1093638 - T 78 -9.6 -3.60348 | opp_overlap 1093638 1093631, overlap 1093635 1093633 1093630 TCCAATATTACATAA TCCACTGA TTA CCAGTGGA TTATGAATTGAATTA scrB 1095118 - 1093682 - | sucrose-6-phosphate hydrolase (sucrase) (invertase) TERM 1548 1096437 - 1096461 + H 100 -11.6 -5.61689 | AATTATTTTTCGTTG TTGGGGTATT CATTT AATACCCCAA TTTTTTATTCATTTT phnA 1096546 - 1096866 + | alkylphosphonate uptake protein purN 1096942 - 1097562 + | phosphoribosylglycinamide formyltransferase TERM 1549 1097606 - 1097625 + F 89 -7.9 -4.91109 | GTAGAACATATTTCA GCCCTTT ACTCTC AAAGGGC TTTTTATCATAAAAA TERM 1550 1097844 - 1097864 + G 87 -8.3 -4.53036 | overlap 1097846 TTACTGGGGTATCCA TACTCTACG TGC CGTAGAGAA TTTTAATATTTCTAA TERM 1551 1097846 - 1097862 + G 76 -10.9 -2.57358 | overlap 1097844 ACTGGGGTATCCATA CTCTACG TGC CGTAGAG AATTTTAATATTTCT TERM 1552 1098338 - 1098326 - g 74 -4.8 -4.6856 | CAAATATCTTAAAAA TGGG ACGCA CCCA GTTGCAAGACGCTGT aspA 1097770 - 1099197 + | aspartate ammonia-lyase HAPS_1110 1099407 - 1099204 - | hypothetical protein TERM 1553 1099273 - 1099249 - G 95 -13 -3.77832 | opp_overlap 1099249, overlap 1099252 CTTGAAATTTAAGAA TAACGCCCTA TTTAG TAGGGCGTTA TTTTTTATATTCTTC TERM 1554 1099249 - 1099273 + g 100 -13.7 -5.55695 | opp_overlap 1099249 1099252 CTTGAAATTTAAGAA TAACGCCCTAT TTA GTAGGGCGTTA TTTTTTATATTCTTC TERM 1555 1099270 - 1099252 - G 86 -10.3 -4.01101 | opp_overlap 1099249, overlap 1099249 GAAATTTAAGAATAA CGCCCTA TTTAG TAGGGCG TTATTTTTTATATTC TERM 1556 1099395 - 1099374 - G 72 -10.1 -2.70932 | CGCTTTGCTCAACCA CTTCCCCCG CAAG CTGGGGAAG AATATCGATCATTCT htpG 1099432 - 1101318 + | heat shock protein 90 TERM 1557 1101344 - 1101321 - T 74 -9.6 -2.99273 | opp_overlap 1101322 1101326, overlap 1101320 1101326 GCTAGGAGCATAAAG TTAAAGGGGC TGTC GCCCCTTTAT TTATTGAAATAAACC TERM 1558 1101322 - 1101343 + T 100 -13.1 -4.1822 | opp_overlap 1101321 1101320 1101326, overlap 1101326 CTAGGAGCATAAAGT TAAAGGGGC TGTC GCCCCTTTA TTTATTGAAATAAAC TERM 1559 1101339 - 1101326 - T 83 -9.5 -3.90286 | opp_overlap 1101322 1101326, overlap 1101321 1101320 GAGCATAAAGTTAAA GGGGC TGTC GCCCC TTTATTTATTGAAAT TERM 1560 1101326 - 1101339 + T 91 -9.5 -4.68209 | opp_overlap 1101326 1101321 1101320, overlap 1101322 GAGCATAAAGTTAAA GGGGC TGTC GCCCC TTTATTTATTGAAAT dacB 1102391 - 1101543 - | D-alanyl-D-alanine carboxypeptidase/endopeptidase, penicillin-binding protein 4 precursor greA 1102511 - 1102987 + | transcription elongation factor GreA TERM 1561 1103210 - 1103187 - T 71 -8.9 -3.18274 | CCCATTTCAACTTAA CGGTGATCG TCTAGG CGATCACCA AAATCAATCATAAAT TERM 1562 1103449 - 1103432 - T 84 -4.9 -5.32944 | gap 1, opp_overlap 1103432 TGGATAATCAAAAAA TGTGGCAA TAT TTGCC-CA GTTATCTTCCCAGCC TERM 1563 1103845 - 1103810 - T 83 -7.1 -4.77165 | gap 1, opp_overlap 1103810 TCGTTCATAATAAAA TACCTGTGTCTGA-AT GTATT ATCTCAGAAACAGGTA TTTACACAAATTGTG TERM 1564 1104249 - 1104208 - T 100 -9.5 -5.09221 | CATAATAAAAAGAAA TGCGCCTACCAACGACTAC TTAA ACAGTCATAGATAGACGCA TAATTAAACTATAAT oppF 1105064 - 1104258 - | ABC-type oligopeptide transport systems, ATP-binding subunit TERM 1565 1104943 - 1104965 + g 70 -2.7 -5.09426 | gap 1, overlap 1104944 1104947 GCATTGACTTCTAAG CTCACA-CCG CCTA CGGCTGTGAA TTTTTTCGGGTTAAA oppCD 1107023 - 1105068 - | ABC-type oligopeptide transport systems, ATP-binding/permease TERM 1566 1105554 - 1105587 + g 71 -7.3 -3.79203 | overlap 1105555 GATCAATACACGCTG ACGCTGACCACCCGA TAAT TCGTGTGGGTAGCGG TTTAAGGTTTTCTCT TERM 1567 1105555 - 1105586 + g 77 -10.8 -2.86437 | overlap 1105554 ATCAATACACGCTGA CGCTGACCACCCGA TAAT TCGTGTGGGTAGCG GTTTAAGGTTTTCTC oppB 1107940 - 1107023 - | ABC-type oligopeptide transport systems, permease component TERM 1568 1108144 - 1108121 - R 100 -13.2 -3.60805 | opp_overlap 1108120 1108116, overlap 1108122 AGACGCTACTTTAAA CGCCTTCACC CGAA GGTGAAGGCA CTATGATTATTTACG TERM 1569 1108143 - 1108122 - R 100 -14.5 -2.76162 | opp_overlap 1108120 1108116, overlap 1108121 GACGCTACTTTAAAC GCCTTCACC CGAA GGTGAAGGC ACTATGATTATTTAC oppA 1109734 - 1108151 - | ABC-type oligopeptide transport systems, periplasmic binding protein rnhA 1110427 - 1109966 - | ribonuclease H TERM 1570 1110150 - 1110167 + g 74 -4.1 -5.10208 | overlap 1110153 TTAACTGGCGTATTA TTACTGG TTTT CCAGTTA TTTTTCTTCCAATTA TERM 1571 1110153 - 1110164 + g 73 -5.8 -4.63592 | overlap 1110150 ACTGGCGTATTATTA CTGG TTTT CCAG TTATTTTTCTTCCAA purU 1111269 - 1110433 - | formyltetrahydrofolate deformylase TERM 1572 1111349 - 1111324 - R 100 -7.7 -5.71983 | gap 1, opp_overlap 1111328 1111329, overlap 1111329 TCAATCATAAAAAAA GAAAA-CCCACA TCT TGTGGGCTTCTC TGTATTCATATCAAA TERM 1573 1111329 - 1111343 + r 75 -10 -2.81297 | opp_overlap 1111324 1111329, overlap 1111328 CATAAAAAAAGAAAA CCCACA TCT TGTGGG CTTCTCTGTATTCAT TERM 1574 1111343 - 1111329 - R 100 -10 -5.61277 | opp_overlap 1111329 1111328, overlap 1111324 CATAAAAAAAGAAAA CCCACA TCT TGTGGG CTTCTCTGTATTCAT hns 1111769 - 1111365 - | DNA-binding protein H-NS TERM 1575 1111492 - 1111502 + g 73 -2.4 -5.1925 | TTATATTTTGCTGGA CGAG GAT CACG TTTTTTACGTTCTAC TERM 1576 1112061 - 1112050 - H 73 -7.2 -4.07859 | TGAAGAAAGAGGAAA GGCG TATT CGCC GAAATCAATTAAGCG TERM 1577 1112615 - 1112599 - g 71 -5.1 -4.57341 | AATTGGGCCCAAAAA CGTATTC AAG GAAAACG TGGTGCAAAATTAAT HAPS_1122 1112281 - 1113807 + | Na(+)/H(+) antiporter TERM 1578 1113842 - 1113868 + F 91 -9.6 -4.55295 | opp_overlap 1113842 1113846, overlap 1113846 AAGATATGAGTAAAA CAAAGCGAAT CCTCGTA ATTCGCTTTG TTTATTTATAGCAAC TERM 1579 1113868 - 1113842 - f 90 -10.3 -4.34947 | opp_overlap 1113842 1113846, overlap 1113846 AAGATATGAGTAAAA CAAAGCGAATC CTCGT AATTCGCTTTG TTTATTTATAGCAAC TERM 1580 1113864 - 1113846 - f 75 -5.3 -4.73614 | opp_overlap 1113846 1113842, overlap 1113842 TATGAGTAAAACAAA GCGAATC CTCGT AATTCGC TTTGTTTATTTATAG TERM 1581 1113846 - 1113864 + F 71 -4.6 -4.83246 | opp_overlap 1113842 1113846, overlap 1113842 TATGAGTAAAACAAA GCGAAT CCTCGTA ATTCGC TTTGTTTATTTATAG TERM 1582 1114843 - 1114870 + G 70 -2.6 -5.011 | overlap 1114846 CACGCATTTGCAGTG GACGCAGAGCGA GGAA TGGCTCTGCTTA TTTTGTTCTTTAGCT TERM 1583 1114846 - 1114867 + G 87 -8.7 -4.57912 | overlap 1114843 GCATTTGCAGTGGAC GCAGAGCGA GGAA TGGCTCTGC TTATTTTGTTCTTTA TERM 1584 1115278 - 1115293 + G 70 -3.2 -4.99035 | opp_overlap 1115280, overlap 1115280 TATGTACATCAATTA CAGTGG CAAC CCACTC TTTTTATCTCACTCG TERM 1585 1115603 - 1115589 - g 72 -10 -2.67364 | overlap 1115588 1115587 ACATCATCAAAAATT GGCAAC CTT GTTGCC CGAACGCCGTTACTA nfrE 1113925 - 1115826 + | cytochrome c-type biogenesis protein TERM 1586 1115914 - 1115904 - g 93 -5.4 -5.54338 | CAATTAAAAGAAAAA GACA ATG TGTC GTTAAGCGAAGATTG dsbE 1115823 - 1116359 + | thiol:disulfide interchange protein DsbE ccmH 1116356 - 1116748 + | cytochrome c-type biogenesis protein ccmH precursor nrfG 1116741 - 1117487 + | formate-dependent nitrite reductase complex NrfG subunit, cytochrome c biogenesis factor fbpC 1118576 - 1117554 - | iron(III) ABC transporter, ATP-binding protein TERM 1587 1118344 - 1118366 + g 93 -7 -5.38047 | TCTTGGAAAATCAGC CCGATTTGAC GCT GTTCAATCGG TTTTTTCTGTAAATC fbpB 1120230 - 1118578 - | iron-uptake permease inner membrane protein TERM 1588 1120291 - 1120267 - R 88 -5.7 -5.45813 | overlap 1120269 CATTAAAAAACAAAA TTCCCCCTT TGCGAAG AAGGGGGTA GAAATTAAATTCGAC fbpA 1121433 - 1120408 - | periplasmic iron-binding protein TERM 1589 1120838 - 1120848 + g 84 -6.8 -4.84017 | overlap 1120830 ACTTGGTCACGGTCG CCAC CTT GTGG TTTTTGTGCAAGATT ccp 1122061 - 1123458 + | cytochrome c peroxidase TERM 1590 1123536 - 1123568 + T 100 -16.5 -3.44222 | opp_overlap 1123536, overlap 1123546 AACAAGAAACTAAAA GGGCTGAAATCAATA TAA TATTGTTTTCAGCCC TTGATTAATAATTTA TERM 1591 1123568 - 1123536 - T 100 -16.5 -4.71708 | opp_overlap 1123536 1123546 AACAAGAAACTAAAA GGGCTGAAATCAATA TAA TATTGTTTTCAGCCC TTGATTAATAATTTA rpsO 1123908 - 1123639 - | 30S ribosomal protein S15 nhaP 1125359 - 1124040 - | NhaP-type Na+/H+ and K+/H+ antiporter ppiD 1125551 - 1127425 + | peptidyl-prolyl cis-trans isomerase D TERM 1592 1127631 - 1127653 + F 100 -10.6 -4.88258 | opp_overlap 1127617, overlap 1127632 AGAGCTAGAATGTCT ACACTCGAAC ACT GTTCGAGTGC TTTTCTTATGCTTTT TERM 1593 1127632 - 1127652 + F 100 -14.1 -3.50515 | opp_overlap 1127617, overlap 1127631 GAGCTAGAATGTCTA CACTCGAAC ACT GTTCGAGTG CTTTTCTTATGCTTT TERM 1594 1127667 - 1127702 + F 100 -12 -5.21709 | overlap 1127671 GCTTTTCTTATGCTT TTAACGCCTTGAGATC GTGA GATTTCAAGGCGTTTG TTTTTTCCTCTCCCG TERM 1595 1127671 - 1127698 + F 100 -15 -5.10526 | overlap 1127667 TTCTTATGCTTTTAA CGCCTTGAGATC GTGA GATTTCAAGGCG TTTGTTTTTTCCTCT TERM 1596 1127735 - 1127774 + F 75 -7.2 -4.25283 | gap 1, overlap 1127771 1127773 TACGGGAGAGGGAGG GCGGAGGGAGAG-GGTTTG CAA TAAACTTCCCTCTCTCTGC TTTTCGTAAAGCCGT TERM 1597 1127808 - 1127831 + F 89 -11 -4.12474 | opp_overlap 1127804, overlap 1127809 TTTGCTCAAAGCTGT CTCTCTCCCG TGAA CGGGAGAGAA TTATTCTTCTTCCTT TERM 1598 1127809 - 1127830 + F 100 -14.5 -3.05857 | opp_overlap 1127804, overlap 1127808 TTGCTCAAAGCTGTC TCTCTCCCG TGAA CGGGAGAGA ATTATTCTTCTTCCT TERM 1599 1128728 - 1128716 - g 73 -5.5 -4.57073 | GATCTTTTGCAAAAA CTCGG CGA CCAAG GCATTGACAGCTTAT ribD 1127876 - 1128967 + | riboflavin biosynthesis protein RibD ribE 1128969 - 1129613 + | riboflavin synthase subunit alpha TERM 1600 1129624 - 1129646 + F 82 -12 -2.57132 | opp_overlap 1129616, overlap 1129623 TTTAAATCCCCCTTA GCCCCCCTTT TTC AAAGGGGGGA ATTATCAAAAAGGAA TERM 1601 1129795 - 1129772 - g 73 -8.2 -3.82191 | gap 1 TCAAGCGTAGAACAA GCCTTAGACGC ATT ACGTC-AAGGC AAAATTATTATCGTC ribA 1129745 - 1130944 + | riboflavin biosynthesis protein ribA TERM 1602 1131006 - 1130978 - f 100 -14.8 -3.05498 | opp_overlap 1130986, overlap 1130986 TACGGGAGAGAGACA GCTCAAAATAGC GTAAG GCTATTTTGAGC AGAGAGAGGGCAAGC ribH 1131140 - 1131601 + | riboflavin synthase subunit beta HAPS_1138 1132504 - 1131713 - | ABC transport system ATP-binding protein HAPS_1139 1133439 - 1132504 - | ABC transporter, inner membrane subunit HAPS_1140 1133610 - 1133491 - | hypothetical protein ldhL 1133632 - 1133850 + | L-lactate dehydrogenase TERM 1603 1133910 - 1133877 - T 85 -9.7 -3.94402 | opp_overlap 1133877 AGAATTGCTAAATAA TAGGCATTTGATTTC ATAA GTAATCAGATGCCTA TTTATGTATAGTAAA TERM 1604 1133877 - 1133910 + T 93 -11.9 -4.1523 | opp_overlap 1133877 AGAATTGCTAAATAA TAGGCATTTGATTTC ATAA GTAATCAGATGCCTA TTTATGTATAGTAAA TERM 1605 1133936 - 1133960 + T 83 -8.7 -4.29325 | overlap 1133938 GTAAAGAGTCATTCA TGTAGAGCTCT TCT AGAGTTCTATA TTTTCAATGTTGCTG TERM 1606 1133938 - 1133958 + T 78 -9.1 -3.741 | overlap 1133936 AAAGAGTCATTCATG TAGAGCTCT TCT AGAGTTCTA TATTTTCAATGTTGC HAPS_1142 1134104 - 1133964 - | hypothetical protein HAPS_1143 1135571 - 1134129 - | bifunctional ABC superfamily ATP binding cassette transporter, binding protein/lytic transglycosylase TERM 1607 1134712 - 1134753 + g 93 -14.1 -2.76651 | opp_overlap 1134718 1134720, overlap 1134718 ACAGTGTCGATAGCT TTTAAATAGCTTTGGCTAT CCAC ATAGTCAAAGCGATTTAAA TAATTGAAATATTTT TERM 1608 1134718 - 1134747 + g 73 -8.7 -3.71527 | opp_overlap 1134718 1134720, overlap 1134712 TCGATAGCTTTTAAA TAGCTTTGGCTAT CCAC ATAGTCAAAGCGA TTTAAATAATTGAAA TERM 1609 1134745 - 1134720 - G 72 -9.1 -3.36073 | opp_overlap 1134718 1134712, overlap 1134718 GATAGCTTTTAAATA GCTTTGGCTAT CCAC ATAGTCAAAGC GATTTAAATAATTGA TERM 1610 1135172 - 1135157 - G 74 -9 -3.58726 | CTTTTTTATACACAA TCTGCC ATGA GGCAGA ATAATAACTTGGACC folD 1136532 - 1135678 - | methenyltetrahydrofolate cyclohydrolase int 1137993 - 1136938 - | phage integrase TERM 1611 1138238 - 1138223 - R 100 -9 -5.4833 | opp_overlap 1138223 1138222 TTACCCAATAAAAAA CCTAGC TTTC GCTAGG CTTGTTCGTTGATCC TERM 1612 1138281 - 1138265 - R 90 -7.2 -5.19275 | opp_overlap 1138265 ATCCATAAAATAAAA CCGCCC ATAAA GAGCGG TTGGTTGTGGTTAAA HAPS_1148 1139095 - 1138292 - | possible prophage antirepressor TERM 1613 1138375 - 1138403 + g 91 -10.4 -4.62069 | overlap 1138355 CGTTAAACTCGTGTG CGATGTTGTAGG CTTTT CCTGCAATATCG TTTTTAACATAGCGA TERM 1614 1138958 - 1138981 + g 74 -6 -4.4009 | overlap 1138948 1138950 AAATTCGTCTGCGTT GCGGTCGTAG ATTT TTACGATTGC TTTTGTAGGATCAGC TERM 1615 1139237 - 1139277 + r 79 -8.3 -4.08485 | opp_overlap 1139245 1139246, overlap 1139247 GCCCATCATTGACTA CTTTTAAAGGGGTTCCCCA ATT TGGGGGGACCTTTGAAAGG TTTGATTTGACTAGA TERM 1616 1139247 - 1139268 + r 78 -9.4 -3.59627 | opp_overlap 1139245 1139246, overlap 1139237 GACTACTTTTAAAGG GGTTCCCC AATTTG GGGGGACC TTTGAAAGGTTTGAT TERM 1617 1139324 - 1139310 - R 100 -10 -5.60993 | opp_overlap 1139310 1139308 1139306 TCGGCTATAAAAAAA GTCGCT TTG AGCGAC TATCATTTTTCACCG TERM 1618 1139310 - 1139324 + r 77 -10 -3.18031 | opp_overlap 1139310, overlap 1139308 1139306 TCGGCTATAAAAAAA GTCGCT TTG AGCGAC TATCATTTTTCACCG TERM 1619 1139443 - 1139427 - R 100 -9.4 -5.4505 | opp_overlap 1139427 GGTGTCAATAAAAAA GCCTGC GTGGT GCAGGC TTTTCAGGGCAACCG TERM 1620 1139427 - 1139443 + r 86 -10.1 -4.07568 | opp_overlap 1139427 GGTGTCAATAAAAAA GCCTGCG TGG TGCAGGC TTTTCAGGGCAACCG HAPS_1149 1140578 - 1139481 - | ISAma3, family ISAs1 HAPS_1150 1141122 - 1140667 - | putative inner membrane protein HAPS_1151 1141303 - 1141106 - | hypothetical protein TERM 1621 1141362 - 1141347 - R 93 -6.8 -5.76633 | CCACACACAAAAAAA GCCTGC AAAT GCAAGC CCTGTCACGTTCTGT TERM 1622 1141408 - 1141389 - R 76 -5 -5.0538 | overlap 1141390 CTGTATTTTAAAAAA GCACTTTC TGTT GAAAGTGG GGGTATCTTAAATCA TERM 1623 1141407 - 1141390 - R 72 -8.5 -3.62746 | overlap 1141389 TGTATTTTAAAAAAG CACTTTC TGTT GAAAGTG GGGGTATCTTAAATC TERM 1624 1141477 - 1141458 - R 100 -11.4 -4.84146 | ACTAGATAAAACAAA GGGGAGCC TTTT AGCTCCCC ACTTCACGATTAAGT HAPS_1152 1141952 - 1141572 - | putative phage associated protein TERM 1625 1141990 - 1141976 - H 100 -10 -5.4505 | CCTTGTAATAAAAAA GCCGTA AAA TACGGC TTGAAAGTGCGGTTA TERM 1626 1142140 - 1142123 - H 83 -9.1 -4.20868 | opp_overlap 1142122 1142123 TTCTGAAAATAAGAA GCCCGAC TGAA ATCGGGC CTTTAAAAAAGGAGC TERM 1627 1142155 - 1142187 + H 71 -7.1 -3.85505 | opp_overlap 1142155 1142154 CCTTTAAAAAAGGAG CTAGGATTATGTTTT GGA AAATCGCAATCCTAG TTATCTTGTTAGTGG TERM 1628 1142406 - 1142387 - g 71 -6.4 -4.15841 | CGATTAAATGATAAA GCCTTAGC AGAA GGTAAGGC ACGCCGTATTTTAAT HAPS_1153 1142318 - 1142530 + | hypothetical protein HAPS_1154 1142812 - 1142549 - | hypothetical protein TERM 1629 1142749 - 1142734 - G 74 -9 -3.61398 | opp_overlap 1142725 CGTTTGCTCGAATAA CGGCAA GGGC TTGCCG TGAGCAGAGTGTTAC HAPS_1155 1143375 - 1142836 - | phage related protein TERM 1630 1143421 - 1143400 - H 100 -10.9 -5.4505 | opp_overlap 1143396 1143400 CCTTGCAATAAAAAA CCGCCTGTA TTGC TACAAGCGG TTGGTTTTCGTGAAA TERM 1631 1143400 - 1143421 + H 78 -8.7 -3.71672 | opp_overlap 1143400, overlap 1143396 CCTTGCAATAAAAAA CCGCCTGTA TTGC TACAAGCGG TTGGTTTTCGTGAAA TERM 1632 1143472 - 1143453 - H 100 -10 -5.4505 | opp_overlap 1143453 TGTTGCAATAAAAAA GCCACCGT AAAA ACGATGGC TTTTCTTAAAACTTC TERM 1633 1143453 - 1143472 + H 84 -7.8 -4.65747 | opp_overlap 1143453 TGTTGCAATAAAAAA GCCACCGT AAAA ACGATGGC TTTTCTTAAAACTTC TERM 1634 1143549 - 1143520 - H 83 -12.3 -2.61602 | overlap 1143517 1143516 CTAATCTATAATGCA CTTGTTTTCAGCA ATGG TGCTGAAAACGAG CTGGGTCTGACCTTA TERM 1635 1143690 - 1143669 - H 78 -10.1 -3.45634 | opp_overlap 1143669 AGTTGAATGAATTAA GCAGGGGGA GAAA TCTCCCTGC TCTTCAAAACTGATA TERM 1636 1143669 - 1143690 + H 85 -12.3 -3.03441 | opp_overlap 1143669 AGTTGAATGAATTAA GCAGGGGGA GAAA TCTCCCTGC TCTTCAAAACTGATA HAPS_1156 1143719 - 1143907 + | hypothetical protein TERM 1637 1143900 - 1143912 + T 73 -6.9 -4.15044 | opp_overlap 1143899 1143900 AGCAATCGCAGAAAG GGGCG TAA TGCCC TTTATTAAAACGCCC TERM 1638 1143942 - 1143923 - T 78 -7.8 -4.25104 | opp_overlap 1143938, overlap 1143934 1143939 TGCCCTTTATTAAAA CGCCCTCA AAAT CAAGGGCG TTGCCATTAATTCAC exo 1144563 - 1143949 - | possible bacteriophage exonuclease TERM 1639 1144457 - 1144479 + g 72 -9.8 -3.05963 | GATTTTTTACCGCTT GGGGTGACGA TAT TTGACACCCC TGTTGCAGTGGGAAT bet 1145426 - 1144560 - | phage recombination protein Bet HAPS_1159 1145894 - 1145436 - | phage-related predicted endonuclease protein HAPS_1160 1146061 - 1145903 - | hypothetical protein TERM 1640 1146095 - 1146072 - H 75 -9.6 -3.18274 | CCCATTTCAACTTAA CGGTGATCGC CTAG ACGATCACCA AAATCAATCATAAAT TERM 1641 1146543 - 1146508 - H 83 -7.1 -4.77165 | gap 1, opp_overlap 1146508 TCGTTCATAATAAAA TACCTGTGTCTGA-AT GTATT ATCTCAGAAACAGGTA TTTACACAAATTGTG TERM 1642 1146772 - 1146793 + H 75 -10.1 -2.80345 | opp_overlap 1146770, overlap 1146769 CAATCAATAACCATT TGTCGGGCA TAAA TGCCCGACC TACATTTTATGAAAT HAPS_1163 1146784 - 1148214 + | possible outer membrane protein, FOG: TPR repeat protein HAPS_1164 1148822 - 1148211 - | 5-formyltetrahydrofolate cyclo-ligase zapA 1149376 - 1149047 - | cell division protein ZapA TERM 1643 1149821 - 1149809 - g 77 -7.7 -4.29106 | opp_overlap 1149819, overlap 1149818 CTTTACAGCAAGAAA CCAAC GAA GTTGG CGAAGCCATTGATGA HAPS_1166 1149451 - 1149996 + | yecA family protein TERM 1644 1150002 - 1150015 + T 100 -9.5 -4.77567 | opp_overlap 1150002 1149997 GGTTCATTAATATCA GGGGC ATAC GCCCC TTTTATTATGCCGCT TERM 1645 1150015 - 1150002 - T 73 -9.5 -2.77523 | opp_overlap 1150002, overlap 1149997 GGTTCATTAATATCA GGGGC ATAC GCCCC TTTTATTATGCCGCT nrdD 1151802 - 1150021 - | anaerobic ribonucleoside triphosphate reductase nrdG 1152269 - 1151799 - | anaerobic ribonucleoside-triphosphate reductase activating protein TERM 1646 1152383 - 1152360 - R 95 -8.3 -4.91712 | opp_overlap 1152365, overlap 1152350 GGGAATTGATAAAAA TCAAAGTGA GTGAAA TCACTTTGA TAAGCTCAAAAGAAA trpG 1153007 - 1152444 - | para-aminobenzoate synthase component II rmuC 1154623 - 1153007 - | DNA recombination protein RmuC-like protein TERM 1647 1154760 - 1154733 - H 73 -2 -5.37043 | opp_overlap 1154734, overlap 1154734 1154735 ACTCTATATAAAAAA TTGCTACAATAG CCCA CTATTATAGCCT TGCCTATATACAAGC hemB 1154803 - 1155825 + | delta-aminolevulinic acid dehydratase HAPS_1172 1156034 - 1156615 + | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase aslB 1156622 - 1157833 + | arylsulfatase regulator (Fe-S oxidoreductase) TERM 1648 1158031 - 1158083 + T 72 -9.5 -2.6999 | opp_overlap 1158040 1158065, overlap 1158033 1158065 AAACTATGCCAAGAG GACAAAACAGTTGCTAATGTTTA TTTTCTC TAAATGTTAGCAACACTTTTGTC TACTATGCCTTTTAA hepA 1160919 - 1158100 - | ATP-dependent helicase HepA TERM 1649 1158220 - 1158246 + g 70 -9.5 -2.71364 | overlap 1158222 ACGAATGTTTTTATT CACCGCTTG TAGTGATGT CAAGCGGTG TAATTCAGCACCTAA TERM 1650 1158300 - 1158318 + g 83 -7.4 -4.7497 | opp_overlap 1158298 1158301, overlap 1158301 CCTGTTCAATTAAGG ATTGTGCC TGT GGCACAAC TTTTTCATCGCTGAA TERM 1651 1158301 - 1158317 + g 82 -10.9 -3.445 | opp_overlap 1158298 1158301, overlap 1158300 CTGTTCAATTAAGGA TTGTGCC TGT GGCACAA CTTTTTCATCGCTGA TERM 1652 1158317 - 1158301 - G 77 -10.9 -2.84098 | opp_overlap 1158301 1158300, overlap 1158298 CTGTTCAATTAAGGA TTGTGCC TGT GGCACAA CTTTTTCATCGCTGA pgi 1162726 - 1161083 - | glucose-6-phosphate isomerase HAPS_1176 1163005 - 1162745 - | hypothetical protein TERM 1653 1162774 - 1162792 + g 70 -3.1 -5.00765 | overlap 1162775 CAGTTGATGATGTTG AGCTTAG TTCAT CTAAGCG TTTTTCTAATTCATT TERM 1654 1163222 - 1163209 - R 95 -5.3 -6.09196 | opp_overlap 1163209 CCCAAAAGAAAAAAA CTAAC TTGC GTTAG TTCATTCGATTTGAA aroE 1164508 - 1163690 - | shikimate 5-dehydrogenase sua5 1165066 - 1164512 - | SUA5 protein, possible translation factor TERM 1655 1164918 - 1164932 + g 75 -2.8 -5.27477 | overlap 1164920 ATTAAAATCAACCCC TTGTCT TCT GGACGA TTTTTTAATTGAAGT HAPS_1183 1165596 - 1165066 - | DNA topoisomerase I-related protein HAPS_1184 1165909 - 1165604 - | hypothetical protein recX 1166357 - 1165902 - | regulatory protein RecX TERM 1656 1166382 - 1166401 + r 88 -10.8 -3.79473 | opp_overlap 1166382 GCAGTAAAATAAAAA TGCGGTTT TCAC AAACCGCA TTTCGCTATTATAGT TERM 1657 1166401 - 1166382 - R 100 -10.8 -5.50723 | opp_overlap 1166382 GCAGTAAAATAAAAA TGCGGTTT TCAC AAACCGCA TTTCGCTATTATAGT recA 1167528 - 1166410 - | recombinase A TERM 1658 1167199 - 1167225 + g 74 -5.2 -4.66833 | overlap 1167201 TAAAGCGTGTTCAGC GTCAATAAAAGC ACA GGTTTTATTGCC TTTTTGAGCTTGAGC TERM 1659 1167608 - 1167619 + r 86 -4.4 -5.63857 | opp_overlap 1167608 TACTGTTTAACCATA CAGT TGCA ACTG TTTTTTTCAGTTTTT HAPS_1187 1168266 - 1167661 - | hypothetical protein pabB 1169215 - 1168244 - | para-aminobenzoate synthase component I TERM 1660 1169408 - 1169422 + H 75 -8.6 -3.51242 | overlap 1169406 CCAGGCATATGGCAA GCGATA GTT TATCGC TCTTATTGTCACTTT HAPS_1190 1169438 - 1169551 + | hypothetical protein TERM 1661 1169573 - 1169552 - f 71 -8.9 -3.23395 | opp_overlap 1169552 ACCCACCATCATTAA CTATTTGAT ATTA ATCAAATAG TTAATAAAGACCGAC TERM 1662 1169552 - 1169573 + F 71 -8.9 -3.14132 | opp_overlap 1169552 ACCCACCATCATTAA CTATTTGAT ATTA ATCAAATAG TTAATAAAGACCGAC TERM 1663 1169602 - 1169582 - f 81 -8.3 -4.27007 | opp_overlap 1169584, overlap 1169584 CAAATAGTTAATAAA GACCGACTA AAA TAGTCGGTT TTTTGTTGCCTTTAG TERM 1664 1169600 - 1169584 - f 88 -10.9 -3.71981 | opp_overlap 1169584, overlap 1169582 AATAGTTAATAAAGA CCGACTA AAA TAGTCGG TTTTTTGTTGCCTTT TERM 1665 1169584 - 1169600 + F 100 -10.9 -5.52096 | opp_overlap 1169582 1169584 AATAGTTAATAAAGA CCGACTA AAA TAGTCGG TTTTTTGTTGCCTTT TERM 1666 1169918 - 1169931 + G 74 -3.7 -5.1356 | TTAAGTGAAGATCTG GCGTG TCAG CTCGC TTTTTATTGCTCGCC tehB 1169666 - 1170529 + | tellurite resistance protein TehB TERM 1667 1170745 - 1170774 + F 100 -13.9 -3.76789 | opp_overlap 1170743 1170742, overlap 1170748 CTTTGTAAATAATCT GAATCTATTGTTA TCAA TAACAATAGATTC TTCGTTTTATACATT TERM 1668 1170748 - 1170771 + F 85 -9.8 -3.9978 | opp_overlap 1170743 1170742, overlap 1170745 TGTAAATAATCTGAA TCTATTGTTA TCAA TAACAATAGA TTCTTCGTTTTATAC dusA 1170805 - 1171776 + | tRNA-dihydrouridine synthase A TERM 1669 1171855 - 1171894 + T 76 -5.8 -4.58395 | gap 1, opp_overlap 1171857 1171858 1171859, overlap 1171858 1171859 AAATTTGTTGATAAA AAGTGGCTTAACGCCTTAT AGT ACAAGGCCTTAAGCC-CTC TTTTTGAAACATGAA TERM 1670 1171892 - 1171857 - T 100 -10.6 -4.83169 | gap 1, opp_overlap 1171855 1171858 1171859, overlap 1171858 1171859 ATTTGTTGATAAAAA GTGGCTTAACGCCTTAT AGT ACAAGGCCTTAAGCC-C TCTTTTTGAAACATG TERM 1671 1171892 - 1171858 - T 84 -10.8 -3.49419 | opp_overlap 1171858 1171855 1171859, overlap 1171857 1171859 TTTGTTGATAAAAAG TGGCTTAACGCCTTAT AGT ACAAGGCCTTAAGCCC TCTTTTTGAAACATG TERM 1672 1171858 - 1171892 + T 80 -8.6 -3.90762 | opp_overlap 1171857 1171858 1171859, overlap 1171855 1171859 TTTGTTGATAAAAAG TGGCTTAACGCCTTAT AGT ACAAGGCCTTAAGCCC TCTTTTTGAAACATG TERM 1673 1171859 - 1171891 + T 85 -12.1 -2.93975 | opp_overlap 1171857 1171858 1171859, overlap 1171858 1171855 TTGTTGATAAAAAGT GGCTTAACGCCTTAT AGT ACAAGGCCTTAAGCC CTCTTTTTGAAACAT TERM 1674 1171891 - 1171859 - T 95 -14.3 -2.6933 | opp_overlap 1171859 1171858 1171855, overlap 1171857 1171858 TTGTTGATAAAAAGT GGCTTAACGCCTTAT AGT ACAAGGCCTTAAGCC CTCTTTTTGAAACAT rpoD 1174770 - 1172905 - | RNA polymerase sigma factor RpoD TERM 1675 1173553 - 1173570 + g 70 -2.7 -5.03314 | TAAATCAAGGAATTG TAAACCA CGGT TGGTATA TTTTTTAGCAATAGA TERM 1676 1174049 - 1174059 + g 70 -3.2 -4.89233 | CCATGTTTTTGGATT GCTT GTA AGGC TTTTTGATGTTGCTC dnaG 1176617 - 1174869 - | DNA primase TERM 1677 1176646 - 1176656 + r 72 -4 -5.06451 | GCTAGCAAGTGGGTA GTTT CGC AAAC TTTTTTACAATGCTC TERM 1678 1176736 - 1176696 - R 88 -10.5 -3.9009 | opp_overlap 1176698, overlap 1176698 AATGGACGGTATAAA CATTGAAACCGTGATTCCT TAA AGGTTTCACGGTTCCAATT TAACTTCTGTTACCT TERM 1679 1176698 - 1176734 + r 89 -10.9 -3.85509 | opp_overlap 1176698 1176696 TGGACGGTATAAACA TTGAAACCGTGATTCCT TAA AGGTTTCACGGTTCCAA TTTAACTTCTGTTAC TERM 1680 1176734 - 1176698 - R 100 -13.1 -3.53733 | opp_overlap 1176698, overlap 1176696 TGGACGGTATAAACA TTGAAACCGTGATTCCT TAA AGGTTTCACGGTTCCAA TTTAACTTCTGTTAC rpsU 1176976 - 1176761 - | 30S ribosomal protein S21 TERM 1681 1177216 - 1177202 - R 71 -7.2 -3.85698 | opp_overlap 1177200 1177198 1177202 TTCTTGCCTCATAAA TTGCAT TTA ATGCAA TATTATTTCTAAAAC TERM 1682 1177379 - 1177348 - R 74 -4.6 -4.92363 | overlap 1177349 AAACATGTATAAAAA CGAAGTATCTATAA ATTC TTAAAAATACTTCA ATACTTTTATTCTTG HAPS_1197 1177750 - 1177535 - | hypothetical protein rne 1180752 - 1177843 - | ribonuclease E mpl 1182472 - 1181084 - | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase TERM 1683 1182509 - 1182492 - H 74 -4.2 -4.96848 | TTCCTTACATAAAAA TTGTGA ACAGTA TCACAA AACAAAACTTTACTC fbp 1182594 - 1183595 + | fructose-1,6-bisphosphatase TERM 1684 1183640 - 1183613 - f 100 -13.5 -4.52669 | opp_overlap 1183613 1183615 1183637 AATAATGGAAAGAAA CCCACCGCTTG TTTACG CAAGCGGTGAG TTTTTTATATCATTT TERM 1685 1183613 - 1183640 + F 100 -12 -5.43487 | opp_overlap 1183613, overlap 1183615 1183637 AATAATGGAAAGAAA CCCACCGCTTGT TTAC GCAAGCGGTGAG TTTTTTATATCATTT TERM 1686 1183615 - 1183638 + F 90 -13.2 -2.88564 | opp_overlap 1183613, overlap 1183613 1183637 TAATGGAAAGAAACC CACCGCTTGT TTAC GCAAGCGGTG AGTTTTTTATATCAT TERM 1687 1183637 - 1183671 + G 76 -2.2 -5.38549 | opp_overlap 1183613, overlap 1183615 1183613 TGTTTACGCAAGCGG TGAGTTTTTTATATCA TTT TGTTATAAAGACCACA TTTTTGTTCTTTACC HAPS_1201 1183621 - 1183746 + | hypothetical protein hbpA 1183743 - 1185338 + | heme-binding protein A TERM 1688 1185351 - 1185381 + F 70 -8.4 -3.38324 | opp_overlap 1185351 1185356 1185357, overlap 1185357 TAATCTGTCTTAACA GGAAAGGGAAGC AAAATAA GCTTCCTTTTTC ATTTTATTACCGATG TERM 1689 1185357 - 1185375 + F 83 -6 -5.17786 | opp_overlap 1185356 1185351 1185357, overlap 1185351 GTCTTAACAGGAAAG GGAAGC AAAATAA GCTTCC TTTTTCATTTTATTA TERM 1690 1185643 - 1185625 - g 73 -6.6 -4.27796 | overlap 1185627 GAAGAAATCGCAAAA CAGCACGG TTA CCGTGCAA ATGCTTATGCAAAAG TERM 1691 1185641 - 1185627 - g 88 -11.4 -3.72407 | overlap 1185625 AGAAATCGCAAAACA GCACGG TTA CCGTGC AAATGCTTATGCAAA scrR 1185469 - 1186491 + | sucrose operon repressor TERM 1692 1187049 - 1187028 - g 89 -5.9 -5.4833 | CTACCTAAGAAAAAA CAAGAGCAA ATTC TTTCTCTTG AAGGCGTTGATCTCA tyrR 1186644 - 1188242 + | transcriptional regulatory protein TyrR TERM 1693 1188351 - 1188363 + G 87 -4.8 -5.50723 | GTCTGGTTTACTGTA CCAG TGCCT CTGG TTTTTCTTTTAATCC TERM 1694 1189151 - 1189161 + G 81 -5.4 -5.12707 | ATTGAAACGGCTGGA GCAA ATC TTGC TTTTTTAGCCTTTAA sapA 1188239 - 1189879 + | peptide transport periplasmic protein SapA TERM 1695 1190147 - 1190165 + G 76 -4.5 -5.0133 | overlap 1190141 GTTACTTTCGCTGAT GCTAGGC ATTCC GCTTGGC TTTTTTGCGGCGCTA TERM 1696 1190422 - 1190401 - g 76 -4.5 -5.07011 | overlap 1190405 CACATAAATTAAAAA TGATGCAAA GTGC TTTACACCA CCTTGCCCTGCCCAC sapB 1189881 - 1190843 + | peptide transport system permease protein SapB TERM 1697 1190911 - 1190943 + F 76 -6.5 -4.43576 | TACTCTGCTAATACG CTTTGTTTTCTGCAT TTA ATTTAGAAAATAAAG TTTGTTGTGTCTCAT psd 1191031 - 1191924 + | phosphatidylserine decarboxylase dsbE 1191971 - 1192510 + | thiol-disulfide interchange protein ccmH_1 1192510 - 1192974 + | cytochrome C-type biogenesis protein ccmH_2 1192974 - 1193876 + | cytochrome C-type biogenesis protein, TPR repeat-containing protein miaA 1193909 - 1194853 + | tRNA delta(2)-isopentenylpyrophosphate transferase hfq 1194908 - 1195189 + | RNA-binding protein Hfq TERM 1698 1195246 - 1195221 - f 89 -12 -3.34013 | opp_overlap 1195221, overlap 1195226 GACCTCTTGAATGAA CCAAACACAG CAAATT CTGTGTTTGG TTTTCCGTTGCCTGA TERM 1699 1195221 - 1195246 + F 93 -12 -4.28774 | opp_overlap 1195221 1195226 GACCTCTTGAATGAA CCAAACACAG CAAATT CTGTGTTTGG TTTTCCGTTGCCTGA TERM 1700 1195301 - 1195267 - f 76 -5.2 -5.00616 | gap 2, opp_overlap 1195274 1195291, overlap 1195274 CGTTGCCTGAAAAAA CACAA-AACACGC-CT GACAA AGAGCGTGCTATTGTG GTACATCTTTATCTC TERM 1701 1195293 - 1195274 - f 74 -4.3 -5.06052 | gap 1, opp_overlap 1195274 1195291, overlap 1195267 TGAAAAAACACAAAA CACGC-CT GACAA AGAGCGTG CTATTGTGGTACATC hflX 1195344 - 1196570 + | GTP-binding protein hflX gph 1196627 - 1197301 + | phosphoglycolate phosphatase TERM 1702 1197675 - 1197639 - T 100 -17.5 -4.64766 | opp_overlap 1197639 TTCATATTTCAAAAA GTGGCTTAAAGCCTTAT AGT ACCAGGCTTTAAGCCAC TTTTTACCAACGCTT TERM 1703 1197639 - 1197675 + T 100 -15.4 -4.57341 | opp_overlap 1197639 TTCATATTTCAAAAA GTGGCTTAAAGCCT TATAGTACC AGGCTTTAAGCCAC TTTTTACCAACGCTT nanK 1198643 - 1197756 - | N-acetylmannosamine kinase nanE 1199340 - 1198645 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 1704 1199498 - 1199464 - R 100 -8 -5.72622 | overlap 1199469 TCTACAAATAAAAAA CAAAACGGTGAATTTA TTA CAAATTCACCGTTCAA GATAAGTCGTTATAA TERM 1705 1199493 - 1199469 - R 100 -12.3 -5.58051 | overlap 1199464 AAATAAAAAACAAAA CGGTGAATTTA TTA CAAATTCACCG TTCAAGATAAGTCGT idgA 1200438 - 1199530 - | indigoidine synthase A-like protein HAPS_1218 1201534 - 1200431 - | carbohydrate kinase-like protein TERM 1706 1201646 - 1201627 - H 76 -5.8 -4.56597 | TGTCTTTTTCAAAAA TTTGTGAA CAAG CTCACAAA AATAAAGACTGAATC TERM 1707 1201671 - 1201653 - H 78 -5.3 -4.96501 | opp_overlap 1201653 GCTCACAAAAATAAA GACTGAA TCCTG TTCAGCC TTATAGAGTATTGCA TERM 1708 1201845 - 1201873 + H 86 -6.8 -5.20783 | ATTCCAAGTGTATGT GTTCCTGTTAAT TCAAT ATTCACAGGGAC TTTTTGTGTTTCGAT TERM 1709 1202197 - 1202185 - H 78 -6.3 -4.7373 | TTAGTTCAGTAAAAA TTACC GTG GGTAA ACTACAATAACTCTA TERM 1710 1202953 - 1202943 - g 70 -5.4 -4.33274 | CTTACATCAGCAAAA TGAC TGA GTCA GAGCTTTTTGCAGTA TERM 1711 1203136 - 1203119 - g 75 -2.7 -5.24799 | overlap 1203120 CCACAAACAGAAAAA TTCAATG ACAG CATTGAG AACGTTGAATTAGAA HAPS_1220 1202441 - 1203700 + | transport system nucleoside permease TERM 1712 1203717 - 1203747 + F 100 -13.5 -3.86822 | gap 1, opp_overlap 1203722, overlap 1203745 GCTCTCAATTTTGAA CGA-AACACCACAG GCAA CTGTGGTGTTGTCG TTTATGGCAAAGTTA TERM 1713 1203741 - 1203722 - f 93 -12.2 -3.91798 | opp_overlap 1203717 CAATTTTGAACGAAA CACCACAG GCAA CTGTGGTG TTGTCGTTTATGGCA TERM 1714 1203981 - 1203971 - g 79 -6.8 -4.55826 | CGCAAAACATTAAAA GCTC AAG GAGC GGAACAAGTTAAAAT deoC 1203791 - 1204570 + | deoxyribose-phosphate aldolase deoD 1204599 - 1205318 + | purine nucleoside phosphorylase TERM 1715 1205346 - 1205384 + T 95 -11.2 -4.48072 | opp_overlap 1205346 CCCCTGATTGATTAA TCCGCATTTTTGTGAAAT GAA GTATTACAAGAATGCGGA TTTTATCATAACTGT HAPS_1223 1206759 - 1206157 - | hypothetical protein TERM 1716 1207743 - 1207717 - g 83 -5.1 -5.24531 | ATCGTGCAGAAAAAA GATGGCGGTTT CCTTT ACACCACCACC GATATTGCTGCTGCC TERM 1717 1208283 - 1208272 - g 70 -5.8 -4.4831 | opp_overlap 1208271 1208280 ATCGACGAAAAAGAA CGCA ACCT TGCG ATTAAATTATTGCAG argS 1206877 - 1208523 + | arginyl-tRNA synthetase TERM 1718 1208597 - 1208542 - T 100 -15.8 -5.02476 | opp_overlap 1208545 1208548, overlap 1208548 ATAGTCCGTAAAAAA CAACACTTTTATCTACTATGCCAACA AAAA TATCGGCATAGTAGACAAAATGGTTG CTAAAAAGTGGCTTA TERM 1719 1208548 - 1208591 + T 75 -9.8 -2.78018 | opp_overlap 1208548 1208542, overlap 1208545 CGTAAAAAACAACAC TTTTATCTACTATGCCAACA AAAA TATCGGCATAGTAGACAAAA TGGTTGCTAAAAAGT TERM 1720 1208591 - 1208548 - T 100 -16.4 -2.93795 | opp_overlap 1208545 1208548, overlap 1208542 CGTAAAAAACAACAC TTTTATCTACTATGCCAACA AAAA TATCGGCATAGTAGACAAAA TGGTTGCTAAAAAGT TERM 1721 1208603 - 1208642 + T 76 -5.9 -4.58395 | gap 1, opp_overlap 1208605 1208606 1208607, overlap 1208606 1208607 AAAATGGTTGCTAAA AAGTGGCTTAAAGCCT CATAGTACA AGGCTTTAAGCC-CTC TTTTTGAAACATGAA TERM 1722 1208640 - 1208605 - T 100 -12.8 -4.57341 | gap 1, opp_overlap 1208603 1208606 1208607, overlap 1208606 1208607 AATGGTTGCTAAAAA GTGGCTTAAAGCCTCAT AGT ACAAGGCTTTAAGCC-C TCTTTTTGAAACATG TERM 1723 1208606 - 1208640 + T 80 -8.7 -3.90762 | opp_overlap 1208605 1208606 1208607, overlap 1208603 1208607 ATGGTTGCTAAAAAG TGGCTTAAAGCCT CATAGTACA AGGCTTTAAGCCC TCTTTTTGAAACATG TERM 1724 1208640 - 1208606 - T 93 -13 -3.33922 | opp_overlap 1208603 1208606 1208607, overlap 1208605 1208607 ATGGTTGCTAAAAAG TGGCTTAAAGCCTCAT AGT ACAAGGCTTTAAGCCC TCTTTTTGAAACATG TERM 1725 1208607 - 1208639 + T 85 -12.2 -2.93975 | opp_overlap 1208605 1208606 1208607, overlap 1208606 1208603 TGGTTGCTAAAAAGT GGCTTAAAGCCT CATAGTACA AGGCTTTAAGCC CTCTTTTTGAAACAT TERM 1726 1208639 - 1208607 - T 100 -16.5 -2.60032 | opp_overlap 1208607 1208606 1208603, overlap 1208605 1208606 TGGTTGCTAAAAAGT GGCTTAAAGCCTCAT AGT ACAAGGCTTTAAGCC CTCTTTTTGAAACAT TERM 1727 1209610 - 1209572 - T 74 -2.6 -5.27335 | opp_overlap 1209572 1209574, overlap 1209574 TTTTTTAAATAAAAA GAGTTGCTAACATTTA GAGAAAA TAGATATTAGCAACTG TTTTGTCCACTTGGT TERM 1728 1209707 - 1209675 - T 100 -15 -4.97158 | TTACACCAAATAAAA GGGCTGAATACGAT TAAAT ATCGCATCCAGCCC TTAAGATAACAATCT tuf 1210933 - 1209746 - | elongation factor Tu TERM 1729 1211698 - 1211715 + rH 70 -3.5 -5.06472 | gap 1, overlap 1211702 TTTTTACTCAATATT GTAAGCTA AAA TAGCT-AC TTTTATTATTTCTAT HAPS_1233 1211805 - 1211686 - | hypothetical protein TERM 1730 1212204 - 1212192 - gH 74 -4.8 -4.7497 | TCTATCCATTAAAAA CGCT ACAAG AGCG AAATTTAATGAAGAG coaA 1211798 - 1212739 + | pantothenate kinase TERM 1731 1213242 - 1213231 - g 78 -3 -5.41143 | GATGCTGGAAAAAAA TTGT TGGA ACAA AGCCATTTATTAGGG pssA 1212742 - 1213449 + | phosphatidylserine synthase lipA 1214505 - 1213543 - | lipoyl synthase lipB 1215114 - 1214518 - | lipoyltransferase HAPS_1237 1215477 - 1215178 - | hypothetical protein TERM 1732 1215541 - 1215503 - R 100 -17.6 -2.93348 | opp_overlap 1215503, overlap 1215498 1215496 TTTATGAATATGAGA GCGGTGTGATTTTGCAAA AAA TTTGCAAGATCGCACCGC TTGTTTGAATGGCAC TERM 1733 1215503 - 1215541 + r 100 -22 -3.96216 | opp_overlap 1215503 1215498 1215496 TTTATGAATATGAGA GCGGTGTGATTTTGCAAA AAA TTTGCAAGATCGCACCGC TTGTTTGAATGGCAC dacA 1216772 - 1215591 - | D-alanyl-D-alanine carboxypeptidase fraction A/penicillin-binding protein 5 rlpA 1217779 - 1216787 - | rare lipoprotein A TERM 1734 1217477 - 1217494 + g 74 -4.1 -5.04356 | TACCGTATGGGTTGT TCCTTTC TCTT GATAGGA TTTTTGATTATTTGA rodA 1218757 - 1217807 - | rod-shape-determining protein RodA TERM 1735 1218796 - 1218807 + r 70 -3 -5.08824 | ACACTTGGATTACTC TGTT GGTA AACA TTTTTTCACTGCCAC ftsI 1220867 - 1218933 - | cell division protein FtsI/penicillin-binding protein 3 HAPS_1242 1221308 - 1220874 - | SPOUT methyltransferase superfamily protein HAPS_1243 1221656 - 1221342 - | plant Iojap-like protein TERM 1736 1221612 - 1221622 + g 73 -6.8 -4.20025 | ATCCTGAGCTTTCAG CCCT TCG AGGG TTTCTGTTAAAAATT TERM 1737 1222035 - 1222019 - H 78 -10.9 -2.62616 | opp_overlap 1222034 TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCAAGTTCGA TERM 1738 1222100 - 1222122 + H 76 -10.6 -2.72511 | opp_overlap 1222104 1222116, overlap 1222099 GCGGAATCGGTAGAC GCAAGGGATT TAA AATCCCTCGC CTTTCGGGGCGTGCC TERM 1739 1222118 - 1222104 - H 71 -8.6 -3.12847 | opp_overlap 1222100 1222099, overlap 1222116 AATCGGTAGACGCAA GGGATT TAA AATCCC TCGCCTTTCGGGGCG TERM 1740 1222642 - 1222628 - g 73 -7.2 -4.07885 | GATTTCCTCTTAAAA CAACAA AAT TTGTTG GACTGTTTTGTAGAA sfsA 1222256 - 1222966 + | regulator for maltose metabolism TERM 1741 1222960 - 1222978 + F 88 -3.2 -5.78622 | opp_overlap 1222977, overlap 1222962 ATTAATTACCCCTTT AATTTAGA CAC TCTAAATA TTTTTTTTAAAATAG TERM 1742 1222962 - 1222976 + F 76 -5.8 -4.53853 | overlap 1222960 TAATTACCCCTTTAA TTTAGA CAC TCTAAA TATTTTTTTTAAAAT TERM 1743 1223049 - 1223036 - f 73 -5.3 -4.56775 | opp_overlap 1223036 ATTTTGTGCCAAAAA TAACG TGTA CGTTA TTTTCAACAATTTGT TERM 1744 1223655 - 1223640 - g 76 -3.3 -5.24129 | CTGTTTGAGAAAAAA CTTGA ATTACA TCAAG GGCATTTAGTCAAAT hslV 1223448 - 1223969 + | ATP-dependent protease peptidase subunit TERM 1745 1223990 - 1223974 - f 79 -10.9 -2.90382 | opp_overlap 1223980, overlap 1223976 1223978 1223980 AAGAAGTATAGTAGA GACACAC TGC GTGTGTC CAAAAATAAATATAT TERM 1746 1224033 - 1223978 - f 76 -9.8 -3.04537 | opp_overlap 1223980, overlap 1223976 1223974 1223980 1224019 1224020 AGTATAGTAGAGACA CACTGCGTGTGTCCAAAAATAAATAT ATTG ATGTGAATTAACGGACACACGCAGTG TGTCCCTACAAAATG TERM 1747 1224039 - 1224019 - f 78 -9.7 -3.35992 | opp_overlap 1223980, overlap 1223980 1223978 1224020 ATTGATGTGAATTAA CGGACACAC GCA GTGTGTCCC TACAAAATGGAATAA TERM 1748 1224038 - 1224020 - f 88 -13.2 -2.61274 | opp_overlap 1223980, overlap 1223980 1223978 1224019 TTGATGTGAATTAAC GGACACAC GCA GTGTGTCC CTACAAAATGGAATA hslU 1224059 - 1225381 + | ATP-dependent protease ATP-binding subunit TERM 1749 1225563 - 1225589 + G 70 -8 -3.6944 | opp_overlap 1225563, overlap 1225561 ACGAGTTATTTTAAA TGCTTTACTCCG CTA CGGCGTAAAACA TATTTGTATTGCCCC TERM 1750 1225589 - 1225563 - g 79 -10.2 -3.61356 | opp_overlap 1225561 1225563 ACGAGTTATTTTAAA TGCTTTACTCCG CTA CGGCGTAAAACA TATTTGTATTGCCCC menD 1225513 - 1227222 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase, menaquinone biosynthesis protein menD TERM 1751 1227259 - 1227277 + F 83 -7.4 -4.81852 | opp_overlap 1227258 GTCATTCAGGAACAC CCGTGG TCTTTCT CCACGG TTTTCTTGGTTCTCA yfbB 1227261 - 1227989 + | acyl-CoA thioester hydrolase YfbB TERM 1752 1228121 - 1228111 - g 72 -3.2 -5.01553 | AATTTATAAACAAAA GCTA GAA CAGC GTCGTTTGCATAATC accD 1227998 - 1228228 + | acetyl-CoA carboxylase beta subunit TERM 1753 1228307 - 1228341 + T 75 -7.4 -4.27026 | opp_overlap 1228307 ATAGTAGACAAAATT GTTGCTAATGTTTA TTTTCTC TAAATGTTAGCAAC TCTTTTTATTTAAAA phoH 1229595 - 1228528 - | phosphate starvation-inducible protein PhoH, predicted ATPase TERM 1754 1228702 - 1228690 - G 79 -4.9 -5.03314 | CTTACTGTCAAAAAA GTTAA AAC TTAAC TCTGGAACCTCTTTT TERM 1755 1229223 - 1229247 + g 75 -2.7 -5.18643 | AGGCTTGTTGATGTT CGCCACGTGGT TTA ATTACGCCGCG TTTTGTTTTAATTGC tbpA 1229834 - 1230814 + | thiamine-binding periplasmic protein priA 1233067 - 1230854 - | primosome assembly protein PriA TERM 1756 1230954 - 1230933 - G 76 -7.3 -4.25104 | opp_overlap 1230931 TTTTGCTCATCAAAA CGATCTAAC AACT GTTGGATCG CACTTCTTGCCGAAT TERM 1757 1231777 - 1231762 - G 82 -8.2 -4.54727 | opp_overlap 1231762 CGTGGCAAAGTAAAA CAGGGG CAAA CCCCCG TCGGTTTAAAAACAA TERM 1758 1233041 - 1233027 - G 75 -7.8 -4.01381 | overlap 1233028 AGGTAATCGAAATAA CGTGCC AAC GGCACA GGTAGAGCAATTCGG HAPS_1256 1233933 - 1233067 - | DMT superfamily drug/metabolite transporter HAPS_1257 1234814 - 1233933 - | DMT superfamily drug/metabolite transporter TERM 1759 1234883 - 1234862 - R 77 -10.1 -3.1733 | opp_overlap 1234866, overlap 1234860 1234859 1234863 TGTGTTATAAAAGTA GGGACGCCA CGCT TGGCGTCCA TTGCAAAGACGAAGT TERM 1760 1234882 - 1234863 - R 91 -13.6 -2.50077 | opp_overlap 1234866, overlap 1234862 1234860 1234859 GTGTTATAAAAGTAG GGACGCCA CGCT TGGCGTCC ATTGCAAAGACGAAG TERM 1761 1234961 - 1234983 + r 70 -8.4 -3.42605 | opp_overlap 1234959, overlap 1234959 TTACATAATAGATTT TTGGACGCAC ACA GTGTGTCCCA TATATTTTAAATGGA alaT 1236225 - 1235008 - | aminotransferase AlaT TERM 1762 1236440 - 1236425 - g 71 -4 -4.85396 | gap 1, opp_overlap 1236425, overlap 1236426 ACAACTACAACAAAA GCC-TGT GGC ACAAGGC TTAGTACAGTTGCAA TERM 1763 1237398 - 1237421 + G 77 -8 -4.15044 | GCCGCCGTCGCAGGA CTGCCACGCC CTAA GGCGAAGCAG TTTATTCAACAACAG TERM 1764 1237594 - 1237578 - g 73 -5.9 -4.59853 | GGAATTGTCGAAAAA TCTGATC CTC AATCAGA ATGGCAAGAAATTGA menF 1236372 - 1237646 + | menaquinone-specific isochorismate synthase pgpB 1237938 - 1238660 + | phosphatidylglycerophosphatase B TERM 1765 1238849 - 1238862 + G 72 -4.5 -4.73613 | TACGGCACTGTGGGG CTTGG TGTA CCAGG TTTTGTTAATCATAA nagK 1238663 - 1239577 + | N-acetyl-D-glucosamine kinase, transcriptional regulator/sugar kinase TERM 1766 1239601 - 1239580 - f 75 -10.1 -2.84504 | opp_overlap 1239579, overlap 1239577 ATTCTTGAAATAGTA GGTCGGGCA TTTA TGCCCGACA ATCATTTATAAAATA TERM 1767 1239726 - 1239668 - f 79 -11.3 -2.82289 | gap 2, overlap 1239667 1239670 1239700 1239702 TAAAATATGGCAAAG CAGGCATTTATGCCCGACAATTTTTCATA AAA CACGGCAA-T-GTCGGGCATAAATGCCCG ACCTACGGAAAATAA TERM 1768 1239724 - 1239670 - f 78 -10.3 -2.94701 | gap 2, overlap 1239667 1239668 1239700 1239702 AAATATGGCAAAGCA GGCATTTATGCCCGACAATTTTTCATA AAA CACGGCAA-T-GTCGGGCATAAATGCC CGACCTACGGAAAAT gloB 1239744 - 1240451 + | putative hydroxyacylglutathione hydrolase uppS 1240608 - 1241276 + | undecaprenyl pyrophosphate synthetase TERM 1769 1241655 - 1241670 + G 70 -3.3 -4.86001 | GTAAGTCAGTAGCAG CCAAA TTTATT TTTGG TTTTTGTACACTCGT cdsA 1241294 - 1242163 + | CDP-diglyceride pyrophosphorylase TERM 1770 1242262 - 1242276 + G 79 -5 -5.01546 | TGCTCGTAAATGTGG CGTAAA AGT TTTGCG TTTTTCTATCGGTTT yaeL 1242173 - 1243492 + | putative zinc metalloprotease ompD15 1243543 - 1245960 + | protective surface antigen D15 precursor omp26 1246035 - 1246838 + | outer membrane protein 26 TERM 1771 1246868 - 1246910 + G 82 -8.5 -4.15106 | gap 1, opp_overlap 1246875, overlap 1246875 TTAATTGAATTAGCG GAG-CAGATCGGCGGTACTC TAAA GGGTAACGCCGATTTGGCTA TTTTAAGCATTGCTC TERM 1772 1246902 - 1246875 - g 71 -9.8 -2.80291 | opp_overlap 1246868 1246875 AATTAGCGGAGCAGA TCGGCGGTACTC TAAA GGGTAACGCCGA TTTGGCTATTTTAAG TERM 1773 1246875 - 1246902 + G 91 -12 -3.85184 | opp_overlap 1246875, overlap 1246868 AATTAGCGGAGCAGA TCGGCGGTACTC TAAA GGGTAACGCCGA TTTGGCTATTTTAAG TERM 1774 1247370 - 1247388 + G 71 -6 -4.2349 | TAATTCAATCTTCTG CCGTTATT GGT AGTGACGG TTTTGGCTATGCAAA lpxD 1246838 - 1247863 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase fabZ 1247882 - 1248349 + | (3R)-hydroxymyristoyl-acyl carrier protein dehydratase lpxA 1248377 - 1249171 + | UDP-N-acetylglucosamine acyltransferase TERM 1775 1249510 - 1249493 - f 89 -11.3 -3.95817 | opp_overlap 1249493 CAATATTCAACGAAA CCCGCTT TAAC AAGCGGG TTTTTTTGTAACAAA TERM 1776 1249493 - 1249510 + F 100 -11.3 -5.60993 | opp_overlap 1249493 CAATATTCAACGAAA CCCGCTT TAAC AAGCGGG TTTTTTTGTAACAAA TERM 1777 1250679 - 1250669 - g 79 -6.8 -4.58685 | AAAGCGGTCGAAAAA GCAC TCT GTGC GTTAAACAATACTTT thrA 1249562 - 1252006 + | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 1778 1252178 - 1252206 + G 83 -12.5 -2.79831 | CTTGGCACAGCCATT TCGCCGATTGATG GCT CATTACTCGGCGA TGTAGTACAAATTGA thrB 1252103 - 1253050 + | homoserine kinase TERM 1779 1253101 - 1253079 - T 100 -14.2 -2.89039 | overlap 1253069 AATTATTCTCATAGA CTCCGCCCTT ATT AAGGGCGGAA AAGCAAGAGAAAATA tyrA 1254263 - 1253142 - | bifunctional chorismate mutase/prephenate dehydrogenase aroF 1255326 - 1254265 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1780 1255053 - 1255080 + g 77 -5 -4.86862 | gap 1, opp_overlap 1255053 GCATTACAATGTAAA GT-TTATCTGACA CTT TGTCAGCTAACAC TTTTAATTTTTTGGC TERM 1781 1255470 - 1255438 - R 76 -9.3 -3.3506 | gap 1, opp_overlap 1255438 1255438 1255435, overlap 1255429 1255440 1255441 GTCAAAGCCCTATAA TATTTCGGGCGGAC ACATCG GTCCGCCC-AAACA ATGATTTTATAAATA TERM 1782 1255469 - 1255440 - R 77 -10 -3.24161 | opp_overlap 1255438 1255438 1255435, overlap 1255429 1255438 1255441 CAAAGCCCTATAATA TTTCGGGCGGAC ACATCG GTCCGCCCAAAC AATGATTTTATAAAT TERM 1783 1255468 - 1255441 - R 87 -13.5 -2.54015 | opp_overlap 1255438 1255438 1255435, overlap 1255429 1255440 1255438 AAAGCCCTATAATAT TTCGGGCGGAC ACATCG GTCCGCCCAAA CAATGATTTTATAAA opsX 1256499 - 1255477 - | ADP-heptose:LPS heptosyltransferase I TERM 1784 1256519 - 1256542 + r 73 -6 -4.45151 | opp_overlap 1256518, overlap 1256521 1256539 ATTCCTATAAACATT TCGCAGGTTT TGGC AAGCCTGCAA TTTTGGTTGCCTGTT HAPS_1276 1256846 - 1256508 - | dissimilatory sulfite reductase (desulfoviridin), gamma subunit TERM 1785 1257076 - 1257060 - R 70 -6.5 -4.17762 | GACGTTTCAAAATAA GGCTCAT CAG ATGGGCC AGTGTGAGCAAGTGC TERM 1786 1257393 - 1257365 - R 70 -8.1 -3.29144 | opp_overlap 1257378 1257383, overlap 1257383 TTACCCTCTTTATAA CCGACCGCAGCTT GAT AATCCGCAATCGG ATTACCTTGAATTAA TERM 1787 1257940 - 1257920 - R 100 -9.7 -4.8667 | opp_overlap 1257918 1257920 TATACCTCATAAAAA TCCCTGCAT GAT AAGCAGGGA TCTTATTAGATTAAA TERM 1788 1257920 - 1257940 + r 78 -9.7 -3.44686 | opp_overlap 1257920, overlap 1257918 TATACCTCATAAAAA TCCCTGCAT GAT AAGCAGGGA TCTTATTAGATTAAA HAPS_1278 1259415 - 1257967 - | Na+/alanine symporter TERM 1789 1259469 - 1259481 + r 88 -4.9 -5.63103 | TTTAACGATTTTTTA TCTTT TGA AAAGA TTTTTTTAATTAAAA TERM 1790 1259604 - 1259577 - R 72 -8.4 -3.60925 | overlap 1259575 AATTAGCAAATAATA CAAGGGACACCA CGCT CGGCGTCCATTG AATATGACATAACTT rcnA 1260595 - 1259618 - | ABC-type nickel/cobalt efflux system, permease component rcnB 1261227 - 1260586 - | ABC-type nickel/cobalt efflux system, periplasmic component TERM 1791 1261315 - 1261337 + r 85 -12.1 -3.06261 | opp_overlap 1261315, overlap 1261320 TGCTTCAATAAAAAA GCGAACAGA CAAAA TCTGTTCGC TCTTAAAAATTAGGC TERM 1792 1261337 - 1261315 - R 100 -12.8 -5.4505 | opp_overlap 1261315 1261320 TGCTTCAATAAAAAA GCGAACAGAC AAA ATCTGTTCGC TCTTAAAAATTAGGC prlC 1263937 - 1261904 - | Zn-dependent oligopeptidase TERM 1793 1262638 - 1262650 + g 77 -4.8 -4.90266 | opp_overlap 1262638 GTTTTTGTAATGAAC CGTC CGCTA GACG TTTTTGATTGATACA pheA 1264119 - 1265285 + | bifunctional prephenate dehydratase/chorismate mutase ung 1265978 - 1265316 - | uracil-DNA glycosylase grcA 1266174 - 1266557 + | autonomous glycyl radical cofactor GrcA TERM 1794 1266574 - 1266593 + T 82 -7.8 -4.45484 | TACATCTTTTCTCAG GCCCTACC GTAA GATAGGGC TTTATTGTATCTATT accC 1267987 - 1266644 - | biotin carboxylase subunit of acetyl CoA carboxylase TERM 1795 1267252 - 1267273 + g 74 -5.1 -4.72272 | CAGGGGTAATGCCTG GTGCTGGAG CTTC TTCCACCAC TTTTTGATGGCGACG TERM 1796 1267611 - 1267591 - G 70 -9.7 -2.64416 | opp_overlap 1267591, overlap 1267590 1267593 TAGGGCCACCAGAAC CAGGCACAC AAG GTACGCCTG CTTTTTTCATCGCGT accB 1268533 - 1268063 - | biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) TERM 1797 1268591 - 1268569 - H 100 -11.4 -4.94811 | GTAAAAATAAACAAA CTCCATGTTC AAA GAACATAGAG CAAAATTTTGCGTAG HAPS_1287 1268599 - 1268754 + | hypothetical protein aroQ 1269173 - 1268730 - | 3-dehydroquinate dehydratase TERM 1798 1269230 - 1269260 + r 82 -6.7 -4.95957 | opp_overlap 1269229, overlap 1269239 1269257 CAATGTTATCAAATT CTAACCCTCGCCC CTTGT GGGAGAGGGGCAG TTTTTGCTTCGTTTA bioB 1270340 - 1269333 - | biotin synthase TERM 1799 1270383 - 1270358 - R 89 -7.5 -5.04987 | opp_overlap 1270359, overlap 1270360 AAGATCTCCAAAAAA GAGGCACAAGC CGTT GCTTGTGCCAT TCAGTGCGAAAATTA TERM 1800 1270359 - 1270382 + r 79 -11 -3.05715 | opp_overlap 1270358 1270360 AGATCTCCAAAAAAG AGGCACAAGC CGTT GCTTGTGCCA TTCAGTGCGAAAATT TERM 1801 1270381 - 1270360 - R 100 -14.5 -4.14633 | opp_overlap 1270359, overlap 1270358 GATCTCCAAAAAAGA GGCACAAGC CGTT GCTTGTGCC ATTCAGTGCGAAAAT dapD 1271220 - 1270396 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase HAPS_1291 1271320 - 1271198 - | hypothetical protein TERM 1802 1271460 - 1271448 - H 81 -9.1 -4.06678 | ATTGACCCATATAAA GACGC TCA GCGTC GAATGGACTACGAAG HAPS_1292 1271463 - 1271930 + | hypothetical protein rpmF 1271951 - 1272112 + | 50S ribosomal protein L32 TERM 1803 1272174 - 1272191 + G 85 -12.7 -3.19602 | overlap 1272172 GTTAGATGCGATGGG CGGGGAC TTTG GTCCCCG TATTACTATCCCCGC TERM 1804 1272775 - 1272751 - g 76 -6.6 -4.46615 | opp_overlap 1272750 CACCAGCAATTAAAA CAATGTAATC ATCTA AATTACATTG GCTTCTTAGAAGGGG plsX 1272169 - 1273164 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 1805 1273196 - 1273208 + F 88 -4.9 -5.76949 | GTAAAGTTTTATTCA GAAAA AAC TTTTC TTTTTTTTAAAAATC dat 1273450 - 1274466 + | diaminobutyrate--2-oxoglutarate aminotransferase TERM 1806 1275147 - 1275113 - gf 71 -7.3 -3.81339 | opp_overlap 1275089 TATTTAGAAGGCAAA GTTGTGGCTTGC-GTTG TGG CAACAGCAGG-CACAAC GGACGCAGGGGCGAT ddc 1274438 - 1275895 + | L-2,4-diaminobutyrate decarboxylase TERM 1807 1276005 - 1276044 + F 100 -9.6 -5.72622 | opp_overlap 1276025 1276027, overlap 1276008 TAGTTAAATTCATGC TAACCCTATAAAATAG ATAACACC CTATTTTATAGGGTAA TTTTTTATTTATCCC TERM 1808 1276008 - 1276041 + F 84 -11.3 -3.57147 | opp_overlap 1276025 1276027, overlap 1276005 TTAAATTCATGCTAA CCCTATAAAATAG ATAACACC CTATTTTATAGGG TAATTTTTTATTTAT TERM 1809 1276043 - 1276025 - f 77 -8.2 -3.86658 | opp_overlap 1276008 1276005, overlap 1276027 CTATAAAATAGATAA CACCCTAT TTT ATAGGGTA ATTTTTTATTTATCC TERM 1810 1276041 - 1276027 - f 75 -8.6 -3.50193 | opp_overlap 1276008 1276005, overlap 1276025 ATAAAATAGATAACA CCCTAT TTT ATAGGG TAATTTTTTATTTAT ppnK 1276156 - 1277037 + | inorganic polyphosphate/ATP-NAD kinase rph 1277880 - 1277146 - | ribonuclease PH HAPS_1299 1277971 - 1278834 + | conserved stress-induced protein murB 1278838 - 1279866 + | UDP-N-acetylenolpyruvoylglucosamine reductase birA 1279873 - 1280634 + | bifunctional biotin operon repressor/biotin synthetase BirA HAPS_1302 1280836 - 1281198 + | hypothetical protein mogA 1281250 - 1281843 + | molybdenum cofactor biosynthesis protein glnB 1281852 - 1282190 + | nitrogen regulatory protein P-II lspA 1282199 - 1282687 + | lipoprotein signal peptidase ispH 1282688 - 1283632 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase HAPS_1307 1283632 - 1283871 + | hypothetical protein mutY 1284198 - 1285172 + | A/G-specific DNA-adenine glycosylase yggX 1285162 - 1285437 + | probable Fe(2+)-trafficking protein mltC 1285448 - 1286542 + | membrane-bound lytic murein transglycosylase C precursor HAPS_1311 1286642 - 1286499 - | hypothetical protein TERM 1811 1286530 - 1286549 + g 76 -4.3 -5.01732 | opp_overlap 1286543 1286546, overlap 1286546 CCAACAAAAATACCG TAACGTG AGATAA CACGTTG TTTTTTAAACAAATT TERM 1812 1286708 - 1286692 - R 78 -10.9 -2.62616 | opp_overlap 1286705, overlap 1286705 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCGGTGGTTCGA TERM 1813 1286845 - 1286866 + r 100 -14.5 -5.71295 | overlap 1286852 GAGCCATATTTTTAG CCCCGATGA GAAA TCATCGGGG TTTTTCTTTTTCTCT TERM 1814 1286852 - 1286872 + r 70 -2.6 -5.08178 | overlap 1286845 ATTTTTAGCCCCGAT GAGAAATC ATCGG GGTTTTTC TTTTTCTCTATATAT TERM 1815 1286956 - 1286921 - R 89 -7.8 -5.00884 | gap 1, opp_overlap 1286919 1286922 1286923 1286925, overlap 1286922 1286923 1286925 ATGGTTGCTAAAAAA GTGACTTAAAGCCTTAT AGT ACAAGGATTTAAGTC-C TCTTTTTAAATAATT TERM 1816 1286923 - 1286955 + r 74 -9.3 -2.96807 | opp_overlap 1286923 1286921 1286922 1286925, overlap 1286922 1286919 1286925 GGTTGCTAAAAAAGT GACTTAAAGCCTTAT AGT ACAAGGATTTAAGTC CTCTTTTTAAATAAT TERM 1817 1286955 - 1286923 - R 82 -11.5 -2.75708 | opp_overlap 1286922 1286919 1286923 1286925, overlap 1286921 1286922 1286925 GGTTGCTAAAAAAGT GACTTAAAGCCTTAT AGT ACAAGGATTTAAGTC CTCTTTTTAAATAAT TERM 1818 1287153 - 1287181 + r 84 -11.7 -3.19463 | overlap 1287150 1287154 CCATCCGTCTTTCGG GCCCTTCCCCC CGTTTGT GGGGGAAGGGG TTAATGAGTAATAAA TERM 1819 1287154 - 1287180 + r 95 -15.2 -2.51464 | overlap 1287150 1287153 CATCCGTCTTTCGGG CCCTTCCCCC CGTTTGT GGGGGAAGGG GTTAATGAGTAATAA glpC 1288518 - 1287241 - | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 1820 1287470 - 1287451 - G 73 -9.4 -3.0976 | opp_overlap 1287451 TGCAATACCGCAACA TTGTGATG GTAA CATCACAA TTTCAATCCCTGGGA TERM 1821 1287451 - 1287470 + g 79 -9.4 -3.6682 | opp_overlap 1287451 TGCAATACCGCAACA TTGTGATG GTAA CATCACAA TTTCAATCCCTGGGA TERM 1822 1287690 - 1287672 - G 73 -7.4 -4.11216 | TGTTCATTCCTAAAA CGTGATGA TAT TCGTCACG CAAATTCATCGTACA glpB 1289803 - 1288520 - | anaerobic glycerol-3-phosphate dehydrogenase subunit B TERM 1823 1289662 - 1289639 - G 71 -6.8 -3.96827 | gap 1, overlap 1289629 AAAATCAGCGACAAA CTCA-CCGCTT GGC AAACGGCTGAG TAAATCCATTGAACC glpA 1291295 - 1289793 - | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 1824 1290553 - 1290563 + g 75 -5.4 -4.69622 | opp_overlap 1290553, overlap 1290556 CGGGTATGTCTTAAA CTTG GTG CAAG TTTTTCGCCTTCTCT TERM 1825 1291483 - 1291464 - R 82 -7.9 -4.37013 | opp_overlap 1291464 AATTAATGATTAAAA GGAAGAC ATTTTG GTCTTCC TTTTTTATATATACA TERM 1826 1291464 - 1291483 + r 95 -7.9 -5.4251 | opp_overlap 1291464 AATTAATGATTAAAA GGAAGAC ATTTTG GTCTTCC TTTTTTATATATACA rluC 1293480 - 1292521 - | 23S rRNA pseudouridylate synthase C TERM 1827 1292654 - 1292642 - G 70 -3.3 -4.85782 | opp_overlap 1292642, overlap 1292638 GCGTGTAAAAATAAA CGGTT TAA ACCCG CTTGTTGCATTTTTT TERM 1828 1293715 - 1293726 + G 73 -2.2 -5.18726 | GCACTAAATTGTTAA TTGC AATT GCGA TTTTTGTTATCGGGC mscS 1293570 - 1294481 + | small-conductance mechanosensitive channel htpX 1295353 - 1294598 - | Zn-dependent protease with chaperone function TERM 1829 1295376 - 1295397 + r 78 -8.8 -3.72087 | opp_overlap 1295376 TCCTATCATAAAAAA TGCCAAAG CGTTTA CTTTGGCA TTATATTCGGTTAAT TERM 1830 1295397 - 1295376 - R 100 -9.5 -5.31275 | opp_overlap 1295376 TCCTATCATAAAAAA TGCCAAAGC GTTT ACTTTGGCA TTATATTCGGTTAAT ppa 1295947 - 1295420 - | inorganic pyrophosphatase HAPS_1323 1298934 - 1296082 - | superfamily II DNA/RNA helicase, SNF2 family, ATP-dependent fic 1300019 - 1298952 - | filamentation induced by cAMP protein Fic TERM 1831 1300071 - 1300102 + r 100 -13.3 -3.66844 | opp_overlap 1300055 1300054 1300071, overlap 1300080 1300087 TGTACATTCACACAA CATACACAAGAAA ATGGGA TTTCTTGTGTATG TTATTCCGATATGCA TERM 1832 1300102 - 1300071 - R 100 -13.3 -3.53722 | opp_overlap 1300071 1300080 1300087, overlap 1300055 1300054 TGTACATTCACACAA CATACACAAGAAA ATGGGA TTTCTTGTGTATG TTATTCCGATATGCA HAPS_1325 1303583 - 1300179 - | type III restriction protein, res subunit TERM 1833 1300933 - 1300917 - G 70 -5.8 -4.41206 | opp_overlap 1300917 1300931 AACCACTTCATAAAA CTGCCC TTCGT AGGCAG CTTTTAAGCGGTTAT TERM 1834 1302928 - 1302913 - G 86 -4.6 -5.52384 | overlap 1302915 TTTTTATCAAAAAAA CTGGCT TGAA AGCCTG ACAATTCAAACTCTT TERM 1835 1303942 - 1303970 + H 72 -8.1 -3.56092 | opp_overlap 1303947 CCACTTTTTGCCATT CATAAGCACCGGC GCT GGTGGTGCTAATG TTTAAGCCATAATCA TERM 1836 1305986 - 1305998 + H 78 -6.3 -4.88288 | opp_overlap 1305986, overlap 1305994 TGCAACGTGGCTAAA TCTTG CTC CAAGA TTTTCTCTTGTTTTG TERM 1837 1306236 - 1306222 - H 80 -6.4 -4.81249 | GTTTAAACGGAAAAA GACGGT ACG ACCATC ATCAAGGCTAAAACG ilvC 1307007 - 1308488 + | ketol-acid reductoisomerase TERM 1838 1308527 - 1308506 - T 74 -2.9 -5.28176 | opp_overlap 1308506 TTTAGTGATAAAAAA GCCTGCTAT GGAA ATAGTGGGC TTTTTGTGTTTGGTT TERM 1839 1308506 - 1308527 + T 90 -7.3 -5.23644 | opp_overlap 1308506 TTTAGTGATAAAAAA GCCTGCTAT GGAA ATAGTGGGC TTTTTGTGTTTGGTT TERM 1840 1308848 - 1308892 + T 86 -6.7 -5.18561 | gap 1, opp_overlap 1308855, overlap 1308850 1308855 AAATTTCATTTTTTA GA-GAAAAGGGCTTTAACTA TTCCAC TAGCTAAAGCCCTTTTAGTC TTTTTTACATCTTTA TERM 1841 1308850 - 1308889 + T 74 -9.5 -3.10444 | opp_overlap 1308855, overlap 1308848 1308855 ATTTCATTTTTTAGA GAAAAGGGCTTTAACTA TTCCAC TAGCTAAAGCCCTTTTA GTCTTTTTTACATCT TERM 1842 1308855 - 1308884 + T 91 -9.4 -4.64361 | opp_overlap 1308855, overlap 1308850 1308848 ATTTTTTAGAGAAAA GGGCTTTAACTA TTCCAC TAGCTAAAGCCC TTTTAGTCTTTTTTA TERM 1843 1308884 - 1308855 - T 95 -11.6 -4.52857 | opp_overlap 1308855 1308850 1308848 ATTTTTTAGAGAAAA GGGCTTTAACTA TTCCAC TAGCTAAAGCCC TTTTAGTCTTTTTTA HAPS_1328 1309990 - 1308983 - | hypothetical bacteriophage protein/gp34 TERM 1844 1309630 - 1309660 + g 76 -7 -4.32402 | TGGCATCATTATCTT CACGATAATCAATA GGG TATTCAATATCGTG TTCTTTTAATTCCAC TERM 1845 1310331 - 1310342 + H 74 -3 -5.26875 | opp_overlap 1310331 1310338 ACAATGATTTTAAAG TTGA ACAT TCAA TTTTTTAATTAAACA TERM 1846 1310428 - 1310417 - H 73 -7.2 -4.06491 | overlap 1310418 GTAACCTTACACAAA GCGG ATAA CCGC ACCCGATAGATCAAG HAPS_1329 1310631 - 1310756 + | hypothetical protein HAPS_1330 1310762 - 1310971 + | hypothetical protein TERM 1847 1311372 - 1311394 + G 90 -10.6 -4.17048 | CTTGCTAACTTATCG TACCGAGTCG CAA TGGCTCGGTA TTGTTTTAAAAAAGC HAPS_1331 1311124 - 1311498 + | hypothetical protein TERM 1848 1313917 - 1313934 + F 70 -9.1 -3.07291 | opp_overlap 1313917 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 1849 1314336 - 1314311 - f 73 -3.3 -5.15167 | opp_overlap 1314312, overlap 1314312 GAGTAGTAAGAAAAA TCTTGACTG AACAAAAG CAGTCAAGT GTTTAGTAGTTAATA TERM 1850 1314696 - 1314681 - f 76 -7.6 -4.00323 | GCAAAGACAGAAGAA TTGGCT GGGA AGCCAA GCGACACAGGGTGAT TERM 1851 1315794 - 1315780 - f 73 -5.7 -4.58213 | TAAGTAACGATAAAA CGAGT GAAAA ACTCG TTCGCCGGAAGACCA TERM 1852 1317630 - 1317602 - f 72 -7.5 -3.79177 | TAAAGAACAGAAAGA TGTAGGGGCAAAT TAC ATTTGCCCTTAAA GAACGGAAAGATGTA TERM 1853 1317886 - 1317909 + F 100 -9.6 -5.93252 | opp_overlap 1317886 TATTAAAGAGAAGAA CCGCAGGTTA GAGA TAGCTTGCGG TTTTTTGTTTTTAGG putP 1318342 - 1319682 + | sodium/proline symporter, proline permease TERM 1854 1319688 - 1319723 + F 93 -13.4 -3.04517 | opp_overlap 1319695, overlap 1319695 AATGAAATAATTTAT CTAGAAACGGTTTGCC ATTT GGCAAGCCGTTTTTTG CTTTTAACAAGCGGT TERM 1855 1319716 - 1319695 - f 85 -10.1 -3.93583 | opp_overlap 1319695 1319688 TAATTTATCTAGAAA CGGTTTGCC ATTT GGCAAGCCG TTTTTTGCTTTTAAC TERM 1856 1319695 - 1319716 + F 100 -12.3 -5.46698 | opp_overlap 1319695, overlap 1319688 TAATTTATCTAGAAA CGGTTTGCC ATTT GGCAAGCCG TTTTTTGCTTTTAAC TERM 1857 1320159 - 1320126 - g 74 -6.1 -4.386 | gap 1, opp_overlap 1320141 TAATCCGTGACAAAA TTGCCAAAG-GGGA TTGGCGT TCCCACGTTGGCAA TAGCCCTTCTCTATT TERM 1858 1321690 - 1321662 - g 72 -3.1 -5.07053 | overlap 1321663 AAGCACTTGAAAAAA TGGCAGATTTGAT GGA AGCAAATATGCCT CAGCTCTTTGATTTA TERM 1859 1323282 - 1323257 - g 75 -2.5 -5.22006 | gap 1 TCATTAGAAGAAAAA GCTCACTATGCA GAA CGCACAGGG-GC AATTCTCACCTATGT putA 1319798 - 1323409 + | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1860 1323567 - 1323527 - f 100 -19.5 -2.72839 | opp_overlap 1323527, overlap 1323532 AACCACTTGCAACCA CTATATCTTGTGTTTCTAA TTT TTAAAAACACAAGATATAG TTTTTGAGCGAAACT TERM 1861 1323527 - 1323567 + F 100 -17.3 -4.56775 | opp_overlap 1323527 1323532 AACCACTTGCAACCA CTATATCTTGTGTTTCTAA TTT TTAAAAACACAAGATATAG TTTTTGAGCGAAACT TERM 1862 1323562 - 1323532 - f 100 -13.6 -2.86164 | opp_overlap 1323527, overlap 1323527 CTTGCAACCACTATA TCTTGTGTTTCTAA TTT TTAAAAACACAAGA TATAGTTTTTGAGCG TERM 1863 1323586 - 1323598 + F 73 -3.5 -5.0925 | opp_overlap 1323586 TTGAGCGAAACTGAA TTTTT ACA AAAAA TTTTTCCTTTTAAAA nrdB 1323727 - 1324704 + | ribonucleotide-diphosphate reductase beta subunit TERM 1864 1324778 - 1324790 + G 71 -4.8 -4.63932 | TTTGAGTGGTTGAAT GACG ATAGC CGTC TTTTCTTGCAACGTG nrdA 1324691 - 1326400 + | ribonucleotide-diphosphate reductase alpha subunit TERM 1865 1326409 - 1326438 + F 88 -10.9 -3.72073 | opp_overlap 1326416, overlap 1326405 1326416 GGCGTAATCTCTTGC TAGAAAAGCGATC TTCG GGTCGCTTTTTTA TTCCTTTTGATAACT TERM 1866 1326416 - 1326431 + F 93 -6.8 -5.61689 | opp_overlap 1326416, overlap 1326405 1326409 TCTCTTGCTAGAAAA GCGATC TTCG GGTCGC TTTTTTATTCCTTTT HAPS_1343 1326455 - 1326574 + | hypothetical protein TERM 1867 1327435 - 1327391 - g 73 -2.3 -5.30575 | gap 1, overlap 1327394 TAAAAATGCAAAAAA TAAGGAAGCAGCACATAAAT TTATTG ATTTCT-TGCTGCGTCCTGA AAGTGCAAAAACGGT potD 1326588 - 1327637 + | spermidine/putrescine-binding periplasmic protein (SPBP) yaaH 1327652 - 1328218 + | permease, Inner membrane protein yaaH ruvA 1328505 - 1329020 + | holliday junction DNA helicase motor protein sprT 1329612 - 1329142 - | putative SprT-like protein TERM 1868 1329255 - 1329239 - G 83 -5.1 -5.28176 | CGGATTGATAAAAAA TGCGTTT GGC AACCGCA ACGGTAGGGGAATTG HAPS_1348 1330382 - 1329636 - | ribonuclease precursor TERM 1869 1331379 - 1331409 + G 74 -9.1 -3.55622 | gap 1, overlap 1331381 TTTTGGTCGGGATTT C-ATCTGGTGCAGC TGTC GCTGCAGCAGATCG TTTAGCAAAATTACC TERM 1870 1331381 - 1331406 + G 81 -11.9 -2.90992 | overlap 1331379 TTGGTCGGGATTTCA TCTGGTGCAGC TGTC GCTGCAGCAGA TCGTTTAGCAAAATT cysK 1330565 - 1331515 + | cysteine synthase mviN 1333123 - 1331579 - | MviN virulence factor TERM 1871 1333333 - 1333353 + H 100 -8.5 -5.61881 | CTATCGATAGCACTG CATAAAAAA TTG TTTTTTATG TTTTTATTTTTACAC rpsT 1333391 - 1333654 + | 30S ribosomal protein S20 TERM 1872 1333666 - 1333699 + G 89 -11.9 -3.65351 | opp_overlap 1333663 1333675, overlap 1333675 GTAATGGCGAAATTT TGGAAAAAACCGACC GCTT GGTCGGTTTTTTTGA TTTGCATAAAAATGC TERM 1873 1333675 - 1333690 + G 100 -10.4 -5.72207 | opp_overlap 1333675, overlap 1333666 AAATTTTGGAAAAAA CCGACC GCTT GGTCGG TTTTTTTGATTTGCA TERM 1874 1333690 - 1333675 - g 93 -10.4 -5.03747 | opp_overlap 1333675 1333666 AAATTTTGGAAAAAA CCGACC GCTT GGTCGG TTTTTTTGATTTGCA HAPS_1352 1333665 - 1333781 + | hypothetical protein TERM 1875 1335288 - 1335268 - g 70 -5.4 -4.35044 | GTAGTGAAACAGAAA GCCTTGTT GATTA AACAGGGC GAAACCTTTTATCTG mutL 1333972 - 1335741 + | methyl-directed mismatch repair protein metE 1335955 - 1338225 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 1876 1338271 - 1338315 + F 75 -8.8 -3.4878 | gap 1, opp_overlap 1338276 1338283, overlap 1338274 1338276 1338283 ATAGATATCTTTGTC AACAATCTGAAATTAGCCCTA TTAC TTGGGCTAATTTCGGAT-GTA TTCCTTGTAATGTAC TERM 1877 1338274 - 1338313 + F 85 -11.6 -3.31184 | opp_overlap 1338276 1338283, overlap 1338271 1338276 1338283 GATATCTTTGTCAAC AATCTGAAATTAGCCCTA TTAC TTGGGCTAATTTCGGATG TATTCCTTGTAATGT TERM 1878 1338311 - 1338276 - f 90 -12 -3.61715 | opp_overlap 1338274 1338271 1338276 1338283, overlap 1338283 TATCTTTGTCAACAA TCTGAAATTAGCCCTA TTAC TTGGGCTAATTTCGGA TGTATTCCTTGTAAT TERM 1879 1338276 - 1338311 + F 100 -14.2 -3.21466 | opp_overlap 1338276 1338283, overlap 1338274 1338271 1338283 TATCTTTGTCAACAA TCTGAAATTAGCCCTA TTAC TTGGGCTAATTTCGGA TGTATTCCTTGTAAT TERM 1880 1339794 - 1339806 + G 75 -7.7 -4.07885 | CTATCACGGATTTCC CTTGC GGT GCAAG TTTTAACGGCGAATA TERM 1881 1339867 - 1339898 + G 73 -8.6 -3.62522 | AAGTCGATGTTGGGA TCAGCGGACCAACG GCAA CGGTGGTCGGCAGA TTATTACGCCAGTTG recN 1338468 - 1340147 + | DNA repair protein RecN TERM 1882 1340191 - 1340166 - T 100 -10.6 -5.09762 | opp_overlap 1340166 AGTGGAATACAAAAA TGCCTTTGTT AAAGAA AACAAAGGCA TTTTTTTAACAATAG TERM 1883 1340166 - 1340191 + T 100 -10.6 -5.42259 | opp_overlap 1340166 AGTGGAATACAAAAA TGCCTTTGTT AAAGAA AACAAAGGCA TTTTTTTAACAATAG lppA 1341151 - 1340213 - | outer membrane lipoprotein A precursor HAPS_1357 1341621 - 1341232 - | ISMha3, family IS1595 TERM 1884 1342255 - 1342266 + G 70 -5.8 -4.4648 | opp_overlap 1342253 TTGAAAAAAGGCATA TCGG ACAG CCGA TTTTATGGTCGCCGT mutH 1341954 - 1342535 + | DNA mismatch repair protein HAPS_1359 1342611 - 1342492 - | hypothetical protein TERM 1885 1342574 - 1342590 + g 80 -10.9 -3.4033 | overlap 1342572 TGTGCAACTTTTAGT TCGGCAA TTT TTGCCGA TGTTATGTCTAATTT TERM 1886 1342874 - 1342889 + G 74 -4.7 -4.89477 | opp_overlap 1342868 ATGGATAAACCTATT TCAGG ACGTGA CCTGA TTTTATTCTTCGGGG terC 1342622 - 1343350 + | membrane protein TerC, possibly involved in tellurium resistance TERM 1887 1343355 - 1343384 + F 78 -9.4 -3.48053 | opp_overlap 1343355 1343360, overlap 1343360 ATCGGAAATAAATCA TAAAAGCTCTCC AGATTA GGGGAGCTTTTG TATTATTAATATATG TERM 1888 1343379 - 1343360 - f 71 -4.9 -4.68612 | opp_overlap 1343360 1343355, overlap 1343355 AAATAAATCATAAAA GCTCTCC AGATTA GGGGAGC TTTTGTATTATTAAT TERM 1889 1343360 - 1343379 + F 83 -7.1 -4.80656 | opp_overlap 1343355 1343360, overlap 1343355 AAATAAATCATAAAA GCTCTCC AGATTA GGGGAGC TTTTGTATTATTAAT thiQ 1343705 - 1344298 + | thiamin ABC transporter, ATP-binding protein fstN 1344449 - 1345081 + | cell division protein FtsN, sporulation domain-containing protein HAPS_1363 1345097 - 1345417 + | hypothetical protein tonB 1346267 - 1345494 - | TobB energy transducing protein exbD 1346653 - 1346267 - | TonB system transport protein ExbD type-2/biopolymer transport protein exbB 1347148 - 1346696 - | biopolymer transport protein ExbB TERM 1890 1347195 - 1347178 - H 95 -5.6 -6.04953 | opp_overlap 1347178 ATATAAAGAAAAAAA TGCGTA TAGAAT TACGCA TTTATAATAGTTCCT TERM 1891 1347537 - 1347576 + G 73 -10.2 -2.8547 | gap 1, opp_overlap 1347541 1347549, overlap 1347549 GGTGAGTAGTCGTAA TAC-AGCTCAATACCTTGT CGA ACAAGGTTTTGAGCGCGTA TATAGTGTCAAAGGT TERM 1892 1347571 - 1347541 - g 100 -15.6 -3.08073 | opp_overlap 1347537 1347549, overlap 1347549 AGTAGTCGTAATACA GCTCAATACCTTGT CGA ACAAGGTTTTGAGC GCGTATATAGTGTCA TERM 1893 1347549 - 1347563 + G 79 -8.6 -4.09243 | opp_overlap 1347549 1347541, overlap 1347537 TAATACAGCTCAATA CCTTGT CGA ACAAGG TTTTGAGCGCGTATA pspE 1347316 - 1347642 + | rhodanese-related sulfur transferase TERM 1894 1347885 - 1347872 - g 93 -6.7 -5.3798 | opp_overlap 1347872 1347871 CAAGAACAAGAAAAA GCACT TGCA AGTGC CTTTTTAAGTGAAGC TERM 1895 1348003 - 1347991 - g 73 -5.5 -4.65078 | AGAGGGGGAAGAAAA CCCTG AGG CAGAG AAATCCCGTTTGTTT sohB 1347704 - 1348759 + | putative periplasmic protease, secreted serine protease TERM 1896 1348847 - 1348833 - f 74 -4.2 -5.07107 | overlap 1348834 CAAATGGCGAAAAAA TGCGTA TTA TACGCG TCCCTGAGTTAGTAG TERM 1897 1348900 - 1348918 + F 100 -8.9 -5.31519 | opp_overlap 1348903 AATAAAGGTTGTGAA GTACGGT TTTAC ACCGTAC TTTTTATTTGGATAT TERM 1898 1349317 - 1349303 - g 100 -5.6 -5.80364 | opp_overlap 1349303 1349304, overlap 1349304 AGGTGAACAAAAAAA TGGCAG GCT CTGCCC TTTTACGCGAACCTG TERM 1899 1349316 - 1349304 - g 83 -9.1 -4.06592 | opp_overlap 1349304 1349303, overlap 1349303 GGTGAACAAAAAAAT GGCAG GCT CTGCC CTTTTACGCGAACCT dusB 1348978 - 1349955 + | tRNA-dihydrouridine synthase B fis 1349972 - 1350268 + | DNA-binding protein Fis TERM 1900 1350299 - 1350346 + F 86 -4.4 -5.72622 | gap 1, opp_overlap 1350299 AATCATATCATTGAA TCTGCACTTTAAT-CGTTAGG TTTAGTC TCTAACATAATAAAGTGCAGA TTTTTTATTTATAGA ubiE 1350580 - 1351353 + | ubiquinone/menaquinone biosynthesis methyltransferase yigP 1351356 - 1351982 + | unknown YigP-like protein TERM 1901 1352024 - 1351985 - f 78 -9.5 -3.63251 | gap 2, opp_overlap 1351975 1351991, overlap 1351979 1351986 1351989 AGCATTAAATTAGAA TTTATTTTCCCTTCCCCCG TTTA CGGGGGAAGGGAA--TAAG TTGGAAAAAAAGGAA TERM 1902 1352023 - 1351986 - f 86 -13 -2.77227 | gap 2, opp_overlap 1351975 1351991, overlap 1351985 1351979 1351989 GCATTAAATTAGAAT TTATTTTCCCTTCCCCCG TTTA CGGGGGAAGGGAA--TAA GTTGGAAAAAAAGGA TERM 1903 1352022 - 1351989 - f 100 -19.7 -2.64805 | opp_overlap 1351991, overlap 1351986 1351985 1351979 TTAAATTAGAATTTA TTTTCCCTTCCCCCG TTTA CGGGGGAAGGGAATA AGTTGGAAAAAAAGG TERM 1904 1351991 - 1352020 + F 100 -22.3 -2.52464 | opp_overlap 1351989 1351986 1351985 1351979 AAATTAGAATTTATT TTCCCTTCCCCCG TTTA CGGGGGAAGGGAA TAAGTTGGAAAAAAA ubiB 1352044 - 1353693 + | ubiquinone biosynthesis protein ubiB mesJ 1355522 - 1354254 - | cell-cycle protein MesJ dtd 1355965 - 1355531 - | D-tyrosyl-tRNA deacylase rbn 1356810 - 1355962 - | ribonuclease BN TERM 1905 1357004 - 1356946 - g 83 -4.8 -5.3104 | gap 1 TTAGTAAAAACAAAA GATCAAACCCAAGCTCACATACGCC AATTATTTGG GGCGTA-GCTAGATTAAGTTTGATC TTCTTAAATTACCCT HAPS_1377 1356856 - 1356987 + | hypothetical protein espP 1359344 - 1357029 - | putative extracellular serine protease (autotransporter) TERM 1906 1357367 - 1357377 + g 73 -5.4 -4.62783 | opp_overlap 1357367, overlap 1357360 CGTTATCGGCTAAAT TAGC TTG GCTA TTTTTGACATAAATC TERM 1907 1357883 - 1357904 + g 71 -6.7 -4.00042 | gap 1, opp_overlap 1357887 GGTTAAGATCAGTAT GC-AATGAAG TAA CTTCATTAGC TTCTTTGATCGCAGC TERM 1908 1359476 - 1359453 - R 91 -6 -5.59879 | opp_overlap 1359467, overlap 1359466 GAGAAATATAAAAAA CCATCAGTTA AATT TCACCGATGG GTGATTGTAAACTTT purD 1360860 - 1359565 - | phosphoribosylamine--glycine ligase TERM 1909 1360794 - 1360779 - G 70 -3.3 -4.83615 | opp_overlap 1360779 CAGGTGCTACAAAAA CCTTT TCCGCT AAAGG TGATTGACGAACTTT proA 1361050 - 1362300 + | gamma-glutamyl phosphate reductase TERM 1910 1363973 - 1363952 - g 71 -6.7 -4.00042 | gap 1, opp_overlap 1363957 GCTGCGATCAAAGAA GCTAATGAAG TCA CTTCATT-GC ATACTGATCTTAACC TERM 1911 1364489 - 1364479 - g 73 -5.4 -4.62783 | opp_overlap 1364479, overlap 1364486 GATTTATGTCAAAAA TAGC CAA GCTA ATTTAGCCGATAACG espP 1362485 - 1364827 + | putative extracellular serine protease (autotransporter) TERM 1912 1366595 - 1366615 + G 70 -8.3 -3.31144 | opp_overlap 1366595 GGTGATGAAGGTAAA GTAACCTTC TAC GAAGGTAAC TTCTCAGACTACGAA TERM 1913 1366615 - 1366595 - g 73 -8.3 -3.78329 | opp_overlap 1366595 GGTGATGAAGGTAAA GTAACCTTC TAC GAAGGTAAC TTCTCAGACTACGAA HAPS_1382 1365035 - 1366705 + | putative ABC transporter ATP-binding protein TERM 1914 1366704 - 1366747 + F 88 -5.5 -5.60864 | gap 1, opp_overlap 1366714 1366715 1366717, overlap 1366706 AGCGTATTGCGAAGT AATAGTCAAATC-AGCCATA TCTTT TATGGCTGGATGTGGCTATG TTTTTTTAATGTGTG TERM 1915 1366706 - 1366745 + F 86 -8.1 -4.42962 | gap 1, opp_overlap 1366714 1366715 1366717, overlap 1366704 CGTATTGCGAAGTAA TAGTCAAATC-AGCCATA TCTTT TATGGCTGGATGTGGCTA TGTTTTTTTAATGTG TERM 1916 1366735 - 1366715 - f 75 -9.8 -2.86618 | opp_overlap 1366706 1366704, overlap 1366714 1366717 AAGTAATAGTCAAAT CAGCCATA TCTTT TATGGCTG GATGTGGCTATGTTT gor 1366802 - 1368172 + | glutathione reductase TERM 1917 1368703 - 1368681 - g 77 -8.5 -3.81691 | gap 1 AATAGACATCAAGAA TCTTC-GGGG CTAT CCCCAGAAGA GGCTAGAGTAGGTTA HAPS_1384 1368195 - 1368842 + | hypothetical protein nrdG 1369487 - 1368873 - | anaerobic ribonucleotide reductase activating protein NrdG TERM 1918 1369311 - 1369333 + g 71 -4.8 -4.61284 | overlap 1369313 GGAAAAACCTTTGAC CACTTGCATA ATA TCTGCAAGGG TTTTGGTTTCGTATT TERM 1919 1369431 - 1369447 + g 72 -8.7 -3.5936 | opp_overlap 1369431 CATACCTGTATTGAA CCCTTCG CCT TGAAGGG TTTCAAAGATTTCGA pts 1369909 - 1369487 - | 6-pyruvoyl tetrahydrobiopterin synthase queC 1370561 - 1369902 - | queuosine biosynthesis protein QueC TERM 1920 1370656 - 1370618 - H 95 -12.5 -4.20367 | opp_overlap 1370630 CGGTTGAATAAATAA GCGGTACGATGTTGCAA TATTT TTGCATTATCGCACCGC TGTGAAAGGCGACAT TERM 1921 1371032 - 1371042 + G 71 -6.8 -4.09739 | GGTGTTGGCGAGCAT CCAC ATC GTGG TTTTGAAACCGTTAC TERM 1922 1371290 - 1371266 - g 70 -5.7 -4.47259 | opp_overlap 1371266, overlap 1371282 ATGACAACACCAAAA TATCAGGCGAT TAA ATCGGCAGATA TTCCTGTCGTGCAAC pirA 1370843 - 1371715 + | Pirin-like protein pepB 1372066 - 1373364 + | aminopeptidase B TERM 1923 1373377 - 1373396 + F 93 -12.2 -3.91144 | opp_overlap 1373377 TAATGGGAAAGATAA GTTGGGCA TTAA TGCCCAAC TTTATCAAGTATGGA TERM 1924 1373396 - 1373377 - f 93 -12.2 -3.84017 | opp_overlap 1373377 TAATGGGAAAGATAA GTTGGGCA TTAA TGCCCAAC TTTATCAAGTATGGA HAPS_1390 1373419 - 1373862 + | transcriptional regulator TERM 1925 1373913 - 1373887 - T 88 -11 -3.71075 | opp_overlap 1373887 1373887 1373889, overlap 1373885 1373889 ACATTATCTAAAATA CATAGAGACACA TTT TGTGCCTCTATA GTTATTTATTCAGAT TERM 1926 1373887 - 1373914 + T 73 -6.4 -4.2204 | gap 1, opp_overlap 1373885 1373887 1373889, overlap 1373887 1373889 ACATTATCTAAAATA C-ATAGAGACACA TTT TGTGCCTCTATAG TTATTTATTCAGATT TERM 1927 1373889 - 1373911 + T 74 -9.2 -3.11182 | opp_overlap 1373887 1373885 1373889, overlap 1373887 1373887 ATTATCTAAAATACA TAGAGACACA TTT TGTGCCTCTA TAGTTATTTATTCAG TERM 1928 1373911 - 1373889 - T 85 -11.4 -3.43007 | opp_overlap 1373889 1373887 1373887, overlap 1373887 1373885 ATTATCTAAAATACA TAGAGACACA TTT TGTGCCTCTA TAGTTATTTATTCAG tatC 1374497 - 1373919 - | twin-arginine translocase subunit, sec-independent protein export TatC TERM 1929 1374621 - 1374599 - R 86 -8.5 -4.50859 | CAACTAAAATACAAA TAACCGCTC TTAAC AAGCGGTTA CGAAGCTCAATTAAA tatB 1375219 - 1374671 - | twin-arginine translocase subunit, sec-independent protein export TatB TERM 1930 1374781 - 1374795 + g 72 -8.6 -3.54543 | CTGCAATGCGATCCG CCGAAA GCG TTTCGG TTTCAAGCGGTGGGT tatA 1375447 - 1375223 - | twin-arginine translocase subunit, sec-independent protein export TatA TERM 1931 1375562 - 1375550 - H 84 -3.4 -5.64873 | CGTAAGAATAAAAAA GAAG TAATT CTTC AAAATGTGGCGTTCA yidC 1375790 - 1377430 + | putative inner membrane protein translocase component YidC TERM 1932 1377434 - 1377469 + F 100 -13.6 -3.58522 | opp_overlap 1377439, overlap 1377439 GTTAAAAAGTAATTT TATAACATGGGAACAA AGAA TTGTTCCTATGTTGTA TTTAAACCTCATGAT TERM 1933 1377464 - 1377439 - f 73 -9.1 -3.3858 | opp_overlap 1377434 1377439 AAAGTAATTTTATAA CATGGGAACAA AGAA TTGTTCCTATG TTGTATTTAAACCTC TERM 1934 1377439 - 1377464 + F 88 -11.3 -3.82202 | opp_overlap 1377439, overlap 1377434 AAAGTAATTTTATAA CATGGGAACAA AGAA TTGTTCCTATG TTGTATTTAAACCTC smtA 1377440 - 1378228 + | SAM-dependent methyltransferase, SmtA TERM 1935 1378548 - 1378530 - g 76 -2.4 -5.35815 | opp_overlap 1378531, overlap 1378531 1378532 GATATCAAACAAAAA TCCCAATA TAG TATTGGAT ATGCTCAAGGATACC omp18/16 1378272 - 1378784 + | outer membrane protein 18/16 TERM 1936 1378844 - 1378873 + F 100 -10.9 -5.25699 | opp_overlap 1378832 1378844 AAATTGATACCATAA GGATTAGATCTAT TTGA GTGGATCTAATCC TTTTTGTTATCTAAT TERM 1937 1380785 - 1380802 + F 70 -9.1 -3.07291 | opp_overlap 1380785 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 1938 1381355 - 1381330 - f 73 -3.3 -5.15167 | opp_overlap 1381331, overlap 1381331 GAGTAGTAAGAAAAA TCTTGACTG AACAAAAG CAGTCAAGT GTTTAGTAGTTAATA TERM 1939 1381715 - 1381700 - f 76 -7.6 -4.00323 | GCAAAGACAGAAGAA TTGGCT GGGA AGCCAA GCGACACAGGGTGAT TERM 1940 1382813 - 1382799 - f 73 -5.7 -4.58213 | TAAGTAACGATAAAA CGAGT GAAAA ACTCG TTCGCCGGAAGACCA TERM 1941 1385049 - 1385033 - f 82 -10.9 -3.36878 | opp_overlap 1385033 GCCACTTATTTATAA GCGAGTA AAT TACTCGC TTTAACTATATGTAA TERM 1942 1385033 - 1385049 + F 88 -10.9 -3.75535 | opp_overlap 1385033 GCCACTTATTTATAA GCGAGTA AAT TACTCGC TTTAACTATATGTAA TERM 1943 1385184 - 1385164 - f 91 -9.8 -4.42062 | opp_overlap 1385164 CATGTTTCAAATAAA CCGATTAG TTTTG CTAATCGG TTTTTTCATTTCAGT TERM 1944 1385164 - 1385184 + F 100 -10.5 -5.38497 | opp_overlap 1385164 CATGTTTCAAATAAA CCGATTAGT TTT GCTAATCGG TTTTTTCATTTCAGT xerD 1385263 - 1386156 + | site-specific tyrosine recombinase XerD HAPS_1406 1386158 - 1386451 + | hypothetical protein adpP 1387168 - 1386530 - | ADP-ribose pyrophosphatase psiE 1387597 - 1387178 - | phosphate-starvation-inducible protein PsiE, membrane protein TERM 1945 1387458 - 1387448 - G 70 -2.6 -5.03715 | ACTATGGCTAAAAAA TAAT TCA ATTA ATGAGTATGCTTCAT yieE 1388336 - 1387605 - | phosphopantetheinyl transferase TERM 1946 1388222 - 1388252 + g 74 -4.8 -4.68511 | overlap 1388224 GACTTTTCCATTTTT TTATTTGATAAGCT GAC GGCTTATCAAGAGA TTTGTTTATATTCCC TERM 1947 1388354 - 1388388 + r 100 -13.8 -3.13475 | opp_overlap 1388359, overlap 1388359 CTGTCATTATAGAAG AAAAACCCGATAACGA TAT TTGTTATCGGGTTTTA TTGAGTGTAGAATTA TERM 1948 1388383 - 1388359 - R 100 -11.5 -5.25699 | opp_overlap 1388359 1388354 ATTATAGAAGAAAAA CCCGATAACGA TAT TTGTTATCGGG TTTTATTGAGTGTAG TERM 1949 1388359 - 1388383 + r 100 -13.7 -4.70169 | opp_overlap 1388359, overlap 1388354 ATTATAGAAGAAAAA CCCGATAACGA TAT TTGTTATCGGG TTTTATTGAGTGTAG rplL 1388796 - 1388428 - | 50S ribosomal protein L7/L12 rplJ 1389345 - 1388854 - | 50S ribosomal protein L10 coaD 1390213 - 1389746 - | phosphopantetheine adenylyltransferase kdtA 1391498 - 1390215 - | 3-deoxy-D-manno-octulosonic-acid transferase dnaE 1394984 - 1391508 - | DNA polymerase III subunit alpha TERM 1950 1392826 - 1392840 + g 70 -2.8 -5.07486 | overlap 1392810 GTTGCACGTTGAGCT GCCA TCTCTTC TGGC TTTTTCTTACCCATC TERM 1951 1393184 - 1393201 + g 76 -3.5 -5.1861 | CCGTGGTTTTGGCTG CTTTTAA TAAT TTAAAGG TTTTTTCATCGTCAA TERM 1952 1394537 - 1394521 - G 74 -4.4 -4.8543 | opp_overlap 1394521 1394533 TAACGTTGATAAAAA GCCAAA AGCTG TTCGGC TTCTTGCTGATTTTC TERM 1953 1394533 - 1394547 + g 70 -3.5 -4.9138 | opp_overlap 1394521, overlap 1394521 AAAGCCAAAAGCTGT TCGGC TTCTT GCTGA TTTTCTTTCAATAAT HAPS_1415 1395518 - 1395006 - | hypothetical protein HAPS_1416 1396454 - 1395519 - | putative amino-acid ABC transporter, ATP-binding protein yigQ 1397632 - 1396565 - | permease, inner membrane protein yjgQ yjgP 1398729 - 1397629 - | permease, inner membrane protein yjgP TERM 1954 1398560 - 1398529 - G 77 -8.1 -4.26924 | gap 1, opp_overlap 1398536, overlap 1398526 AAGAGCAATAAATAA CGACAAAGGCAACA TCAAC TGT-GCCATTGTCG GCATACCTAATCCGA TERM 1955 1398935 - 1398959 + H 81 -11.5 -2.60809 | opp_overlap 1398935 1398938, overlap 1398934 1398933 1398931 1398937 TGTTTGAGCCAGAAA TATGGACACAC GCA GTGTGTCCCTA CCTTTCTTTATCATT TERM 1956 1398959 - 1398935 - H 91 -11.5 -3.91897 | opp_overlap 1398935 1398934 1398933 1398931 1398937, overlap 1398938 TGTTTGAGCCAGAAA TATGGACACAC GCA GTGTGTCCCTA CCTTTCTTTATCATT TERM 1957 1398937 - 1398957 + H 75 -9.7 -2.82776 | opp_overlap 1398935 1398938, overlap 1398935 1398934 1398933 1398931 TTTGAGCCAGAAATA TGGACACAC GCA GTGTGTCCC TACCTTTCTTTATCA TERM 1958 1398956 - 1398938 - H 88 -13.2 -2.72745 | opp_overlap 1398937 1398935 1398934 1398933 1398931, overlap 1398935 TTGAGCCAGAAATAT GGACACAC GCA GTGTGTCC CTACCTTTCTTTATC TERM 1959 1399364 - 1399350 - g 74 -5 -4.68511 | GCCAATACAAACAAA CCATTC AAA AAATGG TACAAGTCATTAACG TERM 1960 1399662 - 1399642 - g 70 -2.5 -5.0133 | overlap 1399646 GATTGCTGCAAAAAA TGTAGCGAA CTG TCCGCCAAA TGTCTGCAACCCGAA pepA 1399076 - 1400572 + | leucyl aminopeptidase TERM 1961 1400647 - 1400592 - f 100 -13.7 -3.34398 | opp_overlap 1400595, overlap 1400595 TTTGCCTCCTAAATA CAAGCGGTCAGTTAGG-CTCTAAAATT TGCA AATTTT-GAGTCGAAACTGACCGCTTG TAATGGCAGAATTTT TERM 1962 1400644 - 1400595 - f 81 -9.6 -3.81488 | opp_overlap 1400595, overlap 1400592 GCCTCCTAAATACAA GCGGTCAGTTAGG-CTCTAAAATT TGCA AATTTT-GAGTCGAAACTGACCGC TTGTAATGGCAGAAT TERM 1963 1400595 - 1400644 + F 85 -11.8 -3.40522 | opp_overlap 1400592 1400595 GCCTCCTAAATACAA GCGGTCAGT-TAGGCTCTAAAATT TGCA AATTTT-GAGTCGAAACTGACCGC TTGTAATGGCAGAAT TERM 1964 1400694 - 1400718 + F 91 -9.4 -4.71482 | opp_overlap 1400694, overlap 1400685 AATTCTTAACCCAAA GGCGTTATTC CATTA GAATAACGTC TTTTTACGCTTTCCT TERM 1965 1400718 - 1400694 - f 72 -7.9 -3.75897 | opp_overlap 1400685 1400694 AATTCTTAACCCAAA GGCGTTATTCC ATT AGAATAACGTC TTTTTACGCTTTCCT prtC 1400773 - 1402152 + | collagenase prtC/related protease involved in cellular process and singaling TERM 1966 1402220 - 1402275 + F 78 -6.5 -4.58395 | gap 2, opp_overlap 1402220 1402223 AAGCAATTGAACTGA TAAGCGGTAAGA-TGGACTAA-GTTTT TTGC AAATCATTAGCCAAATCTTACCGCTTA TTTTTAGGAGATAAA TERM 1967 1403339 - 1403358 + G 71 -5 -4.52589 | opp_overlap 1403339 TGATTAACAACCAAA TTGGGCAG GAAT TTGCTCAA TTTTATGTGGAAAAA pepO 1402291 - 1404318 + | neutral endopeptidase menB 1404422 - 1405279 + | naphthoate synthase TERM 1968 1406909 - 1406874 - T 93 -7.8 -5.1925 | gap 1, opp_overlap 1406875 1406904 1406905, overlap 1406875 TCATAATTCAAAAAA GTGGCTTAAAGTCCGTA ATA TA-AGACTTTAAGCCAT TTTTAGTGGCCATTT TERM 1969 1406875 - 1406908 + T 100 -9.8 -4.73388 | opp_overlap 1406875 1406874, overlap 1406904 1406905 CATAATTCAAAAAAG TGGCTTAAAGTC CGTAATATAA GACTTTAAGCCA TTTTTAGTGGCCATT TERM 1970 1406908 - 1406875 - T 88 -11.3 -3.70465 | gap 1, opp_overlap 1406875 1406904 1406905, overlap 1406874 CATAATTCAAAAAAG TGGCTTAAAGTCCGTA ATA TA-AGACTTTAAGCCA TTTTTAGTGGCCATT azoR 1407591 - 1407004 - | FMN-dependent NADH-azoreductase TERM 1971 1407736 - 1407787 + r 100 -13.2 -3.89346 | opp_overlap 1407747 1407749, overlap 1407749 TTAAATTGTTCTGAC CGCTTATAAAACACAAGCTCAAGT ATTT ACTTGAGCTTGTATATAAAAAGCG TTTACTACTCTTTTT TERM 1972 1407776 - 1407747 - R 100 -14.5 -4.37886 | opp_overlap 1407736 1407749, overlap 1407749 TGACCGCTTATAAAA CACAAGCTCAAGT ATTT ACTTGAGCTTGTA TATAAAAAGCGTTTA TERM 1973 1407774 - 1407749 - R 100 -14.9 -3.79687 | opp_overlap 1407736 1407749, overlap 1407747 ACCGCTTATAAAACA CAAGCTCAAGT ATTT ACTTGAGCTTG TATATAAAAAGCGTT TERM 1974 1407749 - 1407774 + r 100 -14.9 -2.87463 | opp_overlap 1407749 1407747, overlap 1407736 ACCGCTTATAAAACA CAAGCTCAAGT ATTT ACTTGAGCTTG TATATAAAAAGCGTT HAPS_1427 1408436 - 1408269 - | hypothetical protein TERM 1975 1408537 - 1408506 - R 76 -10.4 -2.69151 | overlap 1408503 TTTTGGCAGAGATGA TTTTAGTTCATTAC GCAA GTAATGAACTAAAT AATGCTAGCATTATT TERM 1976 1408641 - 1408612 - R 100 -12.3 -5.06103 | opp_overlap 1408617, overlap 1408617 AGAATTTTGAAAAAA CAAAAGCCCGATA AATC TATCGGGCTTTTT AAGTCAATGTAGAAT TERM 1977 1408636 - 1408617 - R 100 -12.2 -5.42198 | opp_overlap 1408617, overlap 1408612 TTTGAAAAAACAAAA GCCCGATA AATC TATCGGGC TTTTTAAGTCAATGT TERM 1978 1408617 - 1408636 + r 100 -12.2 -4.67755 | opp_overlap 1408612 1408617 TTTGAAAAAACAAAA GCCCGATA AATC TATCGGGC TTTTTAAGTCAATGT rplQ 1409042 - 1408656 - | 50S ribosomal protein L17 TERM 1979 1409108 - 1409078 - R 82 -7.6 -4.37198 | opp_overlap 1409078 AATCTAAACCTAAAA TTAGTCTTCAGCAA TAC TTGCTGGAGGCCAA TTCTCAAGGCGCATA TERM 1980 1409078 - 1409108 + r 77 -9.8 -3.28924 | opp_overlap 1409078 AATCTAAACCTAAAA TTAGTCTTCAGCAA TAC TTGCTGGAGGCCAA TTCTCAAGGCGCATA rpoA 1410067 - 1409078 - | DNA-directed RNA polymerase subunit alpha TERM 1981 1409569 - 1409581 + g 70 -7.7 -3.64198 | opp_overlap 1409559, overlap 1409563 1409559 1409575 ATAAGCGACCGATTG GACGA TCG TCGTC TTGTGTATGTACACG TERM 1982 1410059 - 1410047 - G 77 -6.3 -4.56597 | GTGTGGCTTTAAAAA TTCTG TTA CAGAA CCCTGCATTTTATCC rpsD 1410719 - 1410099 - | 30S ribosomal protein S4 rpsK 1411137 - 1410748 - | 30S ribosomal protein S11 rpsM 1411510 - 1411154 - | 30S ribosomal protein S13 TERM 1983 1411597 - 1411625 + r 77 -8.1 -3.90922 | opp_overlap 1411597 1411600 1411614, overlap 1411598 CATATCAGGACGAAA TGAGCTGAGCAGT ATA ACTGCTCAGCAGG TTCTTTGCAAGAAAT TERM 1984 1411598 - 1411624 + r 74 -9.4 -2.94232 | opp_overlap 1411597 1411600 1411614, overlap 1411597 ATATCAGGACGAAAT GAGCTGAGCAGT ATA ACTGCTCAGCAG GTTCTTTGCAAGAAA TERM 1985 1411622 - 1411600 - R 100 -16.4 -2.98761 | opp_overlap 1411598 1411597, overlap 1411597 1411614 ATCAGGACGAAATGA GCTGAGCAGT ATA ACTGCTCAGC AGGTTCTTTGCAAGA rpmJ 1411762 - 1411649 - | 50S ribosomal protein L36 secY 1413109 - 1411787 - | preprotein translocase subunit SecY rplO 1413547 - 1413113 - | 50S ribosomal protein L15 TERM 1986 1413364 - 1413354 - G 73 -5.4 -4.56314 | TTAAGAGAAGTAAAA CCAA ATT TTGG TAAACGACGGTATAA rpmD 1413731 - 1413552 - | 50S ribosomal protein L30 rpsE 1414238 - 1413738 - | 30S ribosomal protein S5 rplR 1414606 - 1414253 - | 50S ribosomal protein L18 rplF 1415154 - 1414621 - | 50S ribosomal protein L6 TERM 1987 1415048 - 1415065 + g 79 -5.5 -4.88222 | overlap 1415050 ACTGCATTGTGAATT TCGCGAG ACAA CTCGCCA TTTTTACCTTTTACT rpsH 1415563 - 1415171 - | 30S ribosomal protein S8 rpsN 1415905 - 1415600 - | 30S ribosomal protein S14 rplE 1416456 - 1415917 - | 50S ribosomal protein L5 rplX 1416785 - 1416474 - | 50S ribosomal protein L24 rplN 1417112 - 1416798 - | 50S ribosomal protein L14 TERM 1988 1420828 - 1420814 - R 71 -4.3 -4.76123 | AAATTACCAACAAAA TCAGA CCGCT TCTGA GCAAGCTCAAAAAGC TERM 1989 1421936 - 1421971 + r 83 -7.1 -4.77165 | gap 1, opp_overlap 1421936 CACAATTTGTGTAAA TACCTGTTTCTGAGAT AATAC AT-TCAGACACAGGTA TTTTATTATGAACGA TERM 1990 1422332 - 1422349 + r 84 -4.9 -5.32944 | gap 1, opp_overlap 1422332 GGCTGGGAAGATAAC TG-GGCAA ATA TTGCCACA TTTTTTGATTATCCG TERM 1991 1422571 - 1422594 + r 71 -8.9 -3.18274 | ATTTATGATTGATTT TGGTGATCG CTTAGA CGATCACCG TTAAGTTGAAATGGG HAPS_1448 1424804 - 1422558 - | hypothetical protein HAPS_1449 1425579 - 1424977 - | hypothetical protein TERM 1992 1425315 - 1425341 + g 73 -5.9 -4.59027 | gap 1 AGGTGCGTCCTGCTA CATCGGTC-GTG GTTG CACTGACAGATG TTTTATCTGCTACTT TERM 1993 1425884 - 1425862 - g 76 -9.2 -3.6502 | GATGCCGCACTGAAA GCAGGTTTTA ATT TACAACCTGC AAGTACTTATCGGGA TERM 1994 1426187 - 1426199 + G 78 -4.1 -5.34381 | GGTTATTAGTCAATG CCGAA CGT TTTGG TTTTTATTTCCCTTT vanY 1425715 - 1426401 + | peptidase M15B and M15C DD-carboxypeptidase VanY, endolysin/M15B family zinc (Zn2+) D-Ala-D-Ala carboxypeptidase yejF 1427836 - 1426427 - | ABC transporter ATP-binding protein TERM 1995 1426994 - 1426981 - G 71 -6.7 -3.98173 | opp_overlap 1426980 1426977 GTAAATCGAAGGAAA GCTGT TTGA ACAGC GTTCTTGTTCCCCGT TERM 1996 1427219 - 1427194 - G 77 -5.3 -4.91109 | opp_overlap 1427195, overlap 1427195 TTTTCATCACAAAAA TGTAGCCACCG AGAG CGGTCGCCACT TCAATATCGTGAGTG TERM 1997 1427218 - 1427195 - G 72 -8.8 -3.54183 | opp_overlap 1427195, overlap 1427194 TTTCATCACAAAAAT GTAGCCACCG AGAG CGGTCGCCAC TTCAATATCGTGAGT TERM 1998 1427561 - 1427598 + g 72 -10 -2.57931 | gap 1, overlap 1427560 TAATGAACGGCGTGG CTCTT-GGGGCAACATC ACTAA GGTTTTGCCCCAAAGAG ATTGTAAGCGGTCGG TERM 1999 1427783 - 1427765 - G 74 -5.2 -4.66537 | opp_overlap 1427766, overlap 1427766 CCGTTCAAGACAAAA GCTGATCG GCT CGACCAGT TCAATGCCATCAAGT TERM 2000 1427782 - 1427766 - G 70 -8.7 -3.3944 | opp_overlap 1427766, overlap 1427765 CGTTCAAGACAAAAG CTGATCG GCT CGACCAG TTCAATGCCATCAAG TERM 2001 1427901 - 1427872 - R 81 -7.3 -4.63218 | gap 1, opp_overlap 1427873 1427874 1427896, overlap 1427874 1427875 TGGGTGTTAATAAAA CATCTCCCCTCTTT GCT AAAGAGGGGA-ACA CTTCCTTACTTCACC TERM 2002 1427900 - 1427874 - R 85 -10.2 -3.93367 | opp_overlap 1427873 1427874 1427896, overlap 1427872 1427875 GGTGTTAATAAAACA TCTCCCCTCTTT GCT AAAGAGGGGAAC ACTTCCTTACTTCAC TERM 2003 1427899 - 1427875 - R 100 -13.7 -2.95538 | opp_overlap 1427874 1427873 1427896, overlap 1427874 1427872 GTGTTAATAAAACAT CTCCCCTCTTT GCT AAAGAGGGGAA CACTTCCTTACTTCA nikC 1428689 - 1427907 - | Nickel transport system permease protein nikC nikB 1429465 - 1428686 - | Nickel transport system permease protein nikB TERM 2004 1429705 - 1429734 + r 100 -9.3 -4.93877 | overlap 1429707 1429709 GGAGTGCGGTTTATG TTTACGGACGCCA AGCG TGGCGTCCCTACA TTTTATTTACTCAAC TERM 2005 1429707 - 1429732 + r 83 -11.9 -2.72639 | overlap 1429705 1429709 AGTGCGGTTTATGTT TACGGACGCCA AGCG TGGCGTCCCTA CATTTTATTTACTCA TERM 2006 1429709 - 1429730 + r 75 -10.1 -2.8949 | overlap 1429707 1429705 TGCGGTTTATGTTTA CGGACGCCA AGCG TGGCGTCCC TACATTTTATTTACT nikA 1431320 - 1429737 - | Nickel-binding periplasmic protein precursor nikA TERM 2007 1431219 - 1431229 + g 77 -8.2 -4.2586 | AGTTGTCGGTTCAGT CGGC TTT GCCG TTTCTGTTGCTGTGG modE 1432206 - 1431439 - | molybdenum transport protein TERM 2008 1431546 - 1431560 + g 74 -5 -4.68511 | AACATTCCGTTCCAT TTGCGT TTA ATGCAA TTTCTTTATATTCCC TERM 2009 1431804 - 1431832 + g 73 -10.4 -2.91395 | overlap 1431803 1431806 1431809 CTCTCAATTGGGTGA CAGTGCCAAAAA ATTGG TTTCTGGCACTG CTTTGTAGGGAGAAT TERM 2010 1432508 - 1432493 - g 81 -2.6 -5.67967 | gap 1, opp_overlap 1432494 1432495, overlap 1432494 1432495 ATGAGTATAAAAAAA CTTATCC AGA GGATA-G TTTGACCTTTTCTTT modA 1432450 - 1433235 + | molybdate-binding periplasmic protein, ABC transporter HAPS_1457 1433921 - 1433397 - | hypothetical protein TERM 2011 1434134 - 1434146 + G 72 -9.1 -3.35679 | opp_overlap 1434133 1434134 TATGATGTGGCAAAG GGGGA ATT TCCCC TTGTGACTACACGCA thyA 1434011 - 1434862 + | thymidylate synthase TERM 2012 1435099 - 1435083 - T 78 -10.9 -2.62616 | opp_overlap 1435098 TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 2013 1435169 - 1435191 + T 76 -10.6 -2.72511 | opp_overlap 1435173 1435185, overlap 1435168 GCGGAATCGGTAGAC GCAAGGGATT TAA AATCCCTCGC CTTTCGAGGCGTGCC TERM 2014 1435187 - 1435173 - T 71 -8.6 -3.12847 | opp_overlap 1435169 1435168, overlap 1435185 AATCGGTAGACGCAA GGGATT TAA AATCCC TCGCCTTTCGAGGCG TERM 2015 1435292 - 1435276 - T 78 -10.9 -2.62616 | opp_overlap 1435291 TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA HAPS_1462 1435996 - 1435412 - | hypothetical protein TERM 2016 1435584 - 1435596 + g 77 -6.3 -4.65722 | opp_overlap 1435590, overlap 1435585 1435590 TGATATTCGATGACT GCAAT AGG ATTGC TTTGTTTATCTGTGA TERM 2017 1436069 - 1436098 + H 84 -5.2 -5.31275 | overlap 1436073 TGCAATTGGATTCTT TTAATTTTTCGA CAGAGA TCGAAAAATTTA TTTTTTCTCATAGCA TERM 2018 1436073 - 1436094 + H 83 -6 -5.1471 | overlap 1436069 ATTGGATTCTTTTAA TTTTTCGA CAGAGA TCGAAAAA TTTATTTTTTCTCAT purC 1436173 - 1437030 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 2019 1437097 - 1437134 + F 100 -9.9 -4.75472 | opp_overlap 1437096, overlap 1437101 GCATAAACATTTAAT TTTTTGTAGGGGCGGGG AAAA CCTTACCCCTACATAAA TTTTCTTAATATAGA TERM 2020 1437101 - 1437130 + F 77 -10.7 -2.85912 | opp_overlap 1437096, overlap 1437097 AAACATTTAATTTTT TGTAGGGGCGGGG AAAA CCTTACCCCTACA TAAATTTTCTTAATA HAPS_1464 1437258 - 1437932 + | hypothetical protein TERM 2021 1437971 - 1437933 - T 80 -10.5 -3.35088 | gap 1, opp_overlap 1437932 1437930 AAACGCTTTAATTAA GTAGGCTTCTTCCCATCC TTTT GGATGGGAAGAAAA-TAC CTCCTTACTTGTTTG pepD 1439430 - 1437976 - | aminoacyl-histidine dipeptidase TERM 2022 1439575 - 1439593 + H 100 -10.2 -5.47218 | overlap 1439576 TCGCAATTTTTTTAT TCGGTGGC ATC GCCACCGC TTTTTTTAGGTGAAC TERM 2023 1439576 - 1439592 + H 100 -13.7 -3.87608 | overlap 1439575 CGCAATTTTTTTATT CGGTGGC ATC GCCACCG CTTTTTTTAGGTGAA gpt 1439611 - 1440090 + | xanthine-guanine phosphoribosyltransferase TERM 2024 1440100 - 1440123 + T 100 -11.8 -5.24989 | AAATAAAATTCAGTG TTAGGGACGC TTTT GCGTCCTTAA TTTTTTACTCTATCA HAPS_1467 1441157 - 1440186 - | ISNme5, family IS110 TERM 2025 1440315 - 1440344 + g 88 -11.5 -3.53761 | opp_overlap 1440343 GACTTTCTTCGCTTT GCCTTTTGCAACC AATC GGGTGTAAAAGGC TTTAAAAACAGGTTC TERM 2026 1441316 - 1441342 + H 72 -9.4 -2.69151 | opp_overlap 1441319, overlap 1441313 TATAATTTTAATATA CAAGGGACACAC GCA GTGTGTCCCTAC TGATATATAAAGGAC TERM 2027 1441339 - 1441319 - H 100 -15.5 -3.6914 | opp_overlap 1441316 1441313 AATTTTAATATACAA GGGACACAC GCA GTGTGTCCC TACTGATATATAAAG HAPS_1468 1441414 - 1442124 + | putative esterase lysA 1442162 - 1443421 + | diaminopimelate decarboxylase mtr 1443440 - 1444654 + | tryptophan-specific transport protein TERM 2028 1445131 - 1445120 - g 86 -7.2 -5.14163 | opp_overlap 1445125, overlap 1445114 ATTTATCAAGAAAAA GGCG TTTT CGCC CTTGCGACATTAGAT mutS 1444736 - 1447297 + | DNA mismatch repair protein HAPS_1472 1447576 - 1448316 + | putative metal-activated pyridoxal enzyme TERM 2029 1448457 - 1448418 - T 100 -15.4 -3.50715 | gap 1, opp_overlap 1448425 1448428, overlap 1448419 1448425 ATAATTGTGAGATAA GTCTAAAGACTCTATACTG AAT CAGTATAGAATCTTTAG-C TAGCGGTCATCACAA TERM 2030 1448457 - 1448419 - T 100 -15.6 -2.69947 | opp_overlap 1448425 1448428, overlap 1448418 1448425 TAATTGTGAGATAAG TCTAAAGACTCTATACTG AAT CAGTATAGAATCTTTAGC TAGCGGTCATCACAA TERM 2031 1448451 - 1448425 - T 100 -13.2 -3.70811 | opp_overlap 1448425 1448428, overlap 1448418 1448419 TGAGATAAGTCTAAA GACTCTATACTG AAT CAGTATAGAATC TTTAGCTAGCGGTCA TERM 2032 1448425 - 1448451 + T 88 -11 -3.65351 | opp_overlap 1448425 1448418 1448419, overlap 1448428 TGAGATAAGTCTAAA GACTCTATACTG AAT CAGTATAGAATC TTTAGCTAGCGGTCA TERM 2033 1448428 - 1448448 + T 78 -11.3 -2.64144 | opp_overlap 1448425 1448418 1448419, overlap 1448425 GATAAGTCTAAAGAC TCTATACTG AAT CAGTATAGA ATCTTTAGCTAGCGG htrA 1449873 - 1448494 - | periplasmic serine protease do/hhoA-like precursor TERM 2034 1448855 - 1448865 + g 70 -5.4 -4.46404 | TCTTTGCCAGCCCCA GTAG TCG CTAC TTTTGCTCTTAATTC TERM 2035 1450061 - 1450046 - H 80 -6.2 -5.02439 | opp_overlap 1450046 ATATAATTACAAAAA TGTGAA CTAC TTCACA TTTTATATAAACAAA TERM 2036 1450046 - 1450061 + H 73 -6.2 -4.52589 | opp_overlap 1450046 ATATAATTACAAAAA TGTGAA CTAC TTCACA TTTTATATAAACAAA TERM 2037 1450269 - 1450249 - g 74 -4 -5.13521 | opp_overlap 1450241, overlap 1450237 AAATCATCGAAAAAA TTTTCGTG ATTAA CCCGAAAA AAACAACGCCAGCTT TERM 2038 1450305 - 1450273 - g 93 -7.7 -5.47399 | TTAACCCGAAAAAAA CAACGCCAGCTTACA CAA TGCAAGACGGTGTTG ACTACGTACCAATGT TERM 2039 1451108 - 1451098 - g 73 -6.8 -4.26881 | opp_overlap 1451098, overlap 1451093 GTGCAGAAAACGAAA GCGA AGG TCGC TTCATTTTCTACGGT cstA 1450176 - 1451774 + | carbon starvation protein A, membrane protein TERM 2040 1451785 - 1451809 + T 100 -9.4 -4.87665 | gap 1, opp_overlap 1451789, overlap 1451789 ATTGAATTGTTGAAC TATAGGGGCGA ATTT TCGCCCCT-TA TTTTTGTGGATGAAC TERM 2041 1451789 - 1451806 + T 100 -12.7 -4.5448 | opp_overlap 1451789, overlap 1451785 AATTGTTGAACTATA GGGGCGA ATTT TCGCCCC TTATTTTTGTGGATG TERM 2042 1451806 - 1451789 - T 86 -12.7 -2.90571 | opp_overlap 1451789 1451785 AATTGTTGAACTATA GGGGCGA ATTT TCGCCCC TTATTTTTGTGGATG prmA 1452863 - 1451979 - | ribosomal protein L11 methyltransferase TERM 2043 1453951 - 1453919 - R 100 -18.6 -3.78902 | opp_overlap 1453922 CAAGTAAGATTGAAA GGACTAAGCCCTGT GGAAT ACAGGGCTCAGTCC TTGAACTAAATCAGT TERM 2044 1453922 - 1453948 + r 81 -11.6 -2.73681 | opp_overlap 1453919 GTAAGATTGAAAGGA CTAAGCCCTGTG GAA TACAGGGCTCAG TCCTTGAACTAAATC secB 1454580 - 1454074 - | preprotein translocase subunit SecB HAPS_1478 1455061 - 1454609 - | putative rhodanese-related sulfurtransferase TERM 2045 1455144 - 1455127 - R 95 -12.7 -3.70446 | opp_overlap 1455124 CGACATTTAATATAA GGCACGC TAAT GCGTGCC AAATTATTAATTAGA tig 1456459 - 1455164 - | FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) TERM 2046 1456627 - 1456609 - R 72 -7.6 -3.7282 | TTATTGTAGGAATAA TTTATTCA ATG TGAATAAA GCATATGCTTACCAA TERM 2047 1456952 - 1456967 + r 79 -3.2 -5.4505 | overlap 1456953 TCAGTGGTCTTTTTA TCGGGA TACT TCTCGG TTTTTTCTTACAACG TERM 2048 1457028 - 1457040 + r 70 -3.3 -5.03145 | CAACATTTATACCCA GCGAA ACT TCCGC TTTTTTACCGCATTG HAPS_1480 1457243 - 1457073 - | hypothetical protein TERM 2049 1457219 - 1457229 + g 73 -5.4 -4.56775 | overlap 1457208 1457214 CCAGCGGTGGTTGGT TTCG CAC CGAA TTTTTACCAAACACT TERM 2050 1457731 - 1457704 - H 95 -12.6 -3.65754 | opp_overlap 1457720, overlap 1457705 ATAAACCAGCCTAAA TTCCCTCCCCCG TTTA CGGGGGAGGGTG AGGCCCCTGTGTATA TERM 2051 1457730 - 1457705 - H 100 -16.1 -2.7873 | opp_overlap 1457720, overlap 1457704 TAAACCAGCCTAAAT TCCCTCCCCCG TTTA CGGGGGAGGGT GAGGCCCCTGTGTAT TERM 2052 1458466 - 1458515 + H 100 -8.7 -4.99056 | overlap 1458468 1458471 CTAACATATAACCCT CGTAAGCGGTCAGTTTGTTGCAA TAAT TTGTCATAATCTGACCGCTTATA TTTTTCGTTCTATTG TERM 2053 1458468 - 1458513 + H 100 -13.5 -4.09586 | overlap 1458466 1458471 AACATATAACCCTCG TAAGCGGTCAGTTTGTTGCAA TAAT TTGTCATAATCTGACCGCTTA TATTTTTCGTTCTAT TERM 2054 1458471 - 1458510 + H 89 -10.8 -4.13437 | overlap 1458468 1458466 ATATAACCCTCGTAA GCGGTCAGTTTGTTGCAA TAAT TTGTCATAATCTGACCGC TTATATTTTTCGTTC pncB 1458748 - 1459932 + | nicotinate phosphoribosyltransferase TERM 2055 1459992 - 1459949 - T 75 -10.5 -2.55297 | opp_overlap 1459954, overlap 1459954 GTATTTTAAATAGAC TAAAAGTTGCTAACCATTG TAAAAG CAAGGGCTAGCAACTTTTT CTCACACATATTGAT TERM 2056 1459987 - 1459954 - T 95 -10.4 -4.46493 | opp_overlap 1459954, overlap 1459949 TTAAATAGACTAAAA GTTGCTAACCATTG TAAAAG CAAGGGCTAGCAAC TTTTTCTCACACATA TERM 2057 1459954 - 1459987 + T 100 -8.9 -4.83615 | opp_overlap 1459954 1459949 TTAAATAGACTAAAA GTTGCTAACCATTGT AAAA GCAAGGGCTAGCAAC TTTTTCTCACACATA map 1460818 - 1460012 - | methionine aminopeptidase glmS 1462752 - 1460920 - | D-fructose-6-phosphate amidotransferase HAPS_1486 1463472 - 1462786 - | sugar metabolism within DeoR family transcriptional regulator TERM 2058 1463414 - 1463396 - G 87 -5.2 -5.4833 | opp_overlap 1463396 CGACGCAATAAAAAA CCGCTTTC TTC AAGAGCGG TTAGATCCTTACGAA HAPS_1487 1464003 - 1463680 - | branched-chain amino acid transport TERM 2059 1464076 - 1464059 - R 72 -8.5 -3.57441 | opp_overlap 1464075, overlap 1464071 AAGCGACAATGATAA TGGCAAT GATA ATTGCCA CAAGCAAAACGCTTG TERM 2060 1464493 - 1464479 - R 74 -4.2 -4.89339 | AAGTACTGAGAAAAA CGGAAA CTA CTCCCG CTCCAGAAACAAAAA TERM 2061 1464822 - 1464787 - R 100 -9 -6.25242 | opp_overlap 1464789 1464791, overlap 1464788 1464789 1464791 AGAACTAAAAAAAAA TTGATAGTGGTGACCC AATT GGGTCACCACTATGTT CAATTAAGATAGATG TERM 2062 1464821 - 1464788 - R 95 -12.5 -4.31485 | opp_overlap 1464789 1464791, overlap 1464787 1464789 1464791 GAACTAAAAAAAAAT TGATAGTGGTGACCC AATT GGGTCACCACTATGT TCAATTAAGATAGAT TERM 2063 1464820 - 1464789 - R 100 -16 -3.16451 | opp_overlap 1464789 1464791, overlap 1464788 1464787 1464791 AACTAAAAAAAAATT GATAGTGGTGACCC AATT GGGTCACCACTATG TTCAATTAAGATAGA TERM 2064 1464789 - 1464820 + r 100 -16 -3.18274 | opp_overlap 1464789 1464788 1464787 1464791, overlap 1464791 AACTAAAAAAAAATT GATAGTGGTGACCC AATT GGGTCACCACTATG TTCAATTAAGATAGA TERM 2065 1464818 - 1464791 - R 100 -18.6 -3.10247 | opp_overlap 1464789 1464791, overlap 1464789 1464788 1464787 CTAAAAAAAAATTGA TAGTGGTGACCC AATT GGGTCACCACTA TGTTCAATTAAGATA TERM 2066 1464791 - 1464818 + r 100 -18.6 -3.15354 | opp_overlap 1464791 1464789 1464788 1464787, overlap 1464789 CTAAAAAAAAATTGA TAGTGGTGACCC AATT GGGTCACCACTA TGTTCAATTAAGATA TERM 2067 1464998 - 1464973 - R 77 -9.9 -3.11786 | gap 1, opp_overlap 1464973 1464972 1464975, overlap 1464969 1464967 TATATTTAACATATA GAGGT-TAGAGT AAC ACTCTATACCTC GTTGTTTCAATAATC TERM 2068 1464973 - 1464998 + r 76 -9.9 -2.98122 | gap 1, opp_overlap 1464969 1464967 1464973, overlap 1464972 1464975 TATATTTAACATATA GAGGT-TAGAGT AAC ACTCTATACCTC GTTGTTTCAATAATC TERM 2069 1465290 - 1465318 + r 81 -6.9 -4.64861 | opp_overlap 1465292 1465295, overlap 1465292 ATAAAGAAAACAATC GATAACTAATGTA ACG TGCATTAGTTATA TTTATTTTGGCCAAA TERM 2070 1465292 - 1465316 + r 83 -9.5 -3.93868 | opp_overlap 1465292 1465295, overlap 1465290 AAAGAAAACAATCGA TAACTAATGTA ACG TGCATTAGTTA TATTTATTTTGGCCA TERM 2071 1465354 - 1465344 - R 75 -5.4 -4.80077 | CCAAAATAAAAAGAA GGTT TAA AACC CATGAATGAAGTTTA HAPS_1489 1466259 - 1466074 - | hypothetical protein TERM 2072 1466628 - 1466590 - R 100 -14 -5.28778 | ATCAGGCATAAAAAA GCGGTCAGCTTCTGCAAA TTT TTTACAAAAACAGACCGC TAGTGAGGATAAATT ygiW 1467043 - 1466642 - | putative outer membrane protein TERM 2073 1467146 - 1467134 - R 79 -4.9 -5.12707 | overlap 1467124 GTAAATCTTAAAAAA TTCTT AAG AAGAA AAAATTTTTTTATAT TERM 2074 1467159 - 1467181 + r 73 -9.4 -2.93326 | opp_overlap 1467174, overlap 1467154 1467161 GAAAAAATTTTTTTA TATCTTTATT GAT AATAAAGATA TCTAATCTCTATTTA recG 1469408 - 1467327 - | ATP-dependent DNA helicase TERM 2075 1468926 - 1468940 + g 75 -10 -3.2375 | opp_overlap 1468926 1468924 TAATTTACGCAAAGA GGCTTG CTT CAAGCC TTCGGTTGTCGGGTA TERM 2076 1468940 - 1468926 - G 77 -10 -3.42283 | opp_overlap 1468926, overlap 1468924 TAATTTACGCAAAGA GGCTTG CTT CAAGCC TTCGGTTGTCGGGTA TERM 2077 1469472 - 1469458 - R 76 -10 -3.05498 | overlap 1469469 TATGCTACATAGAGA GGGCTA AAG TAGCCC TTAGGGACAAAAAAT xseA 1470726 - 1469521 - | exodeoxyribonuclease VII large subunit birA 1471590 - 1470802 - | biotin apo-protein ligase TERM 2078 1471723 - 1471707 - g 83 -5.1 -5.21709 | opp_overlap 1471707 TCTCAGACTAAAAAA TGGTTAG AGG CAAACCA ATCTCTTTCTTTTAT TERM 2079 1471861 - 1471887 + G 75 -5.8 -4.78326 | opp_overlap 1471866 1471867 GTTTTGCATTGGGGC GTAAAGCTGCTG TTT CTGCAGTATTAC TTTATTTATTTGAAG bioY 1471674 - 1472240 + | biotin biosynthesis protein BioY HAPS_1496 1473180 - 1472371 - | Cof-like, HAD superfamily hydrolase comF 1473304 - 1473981 + | competence protein F tatD 1474767 - 1473967 - | Mg-dependent deoxyribonuclease vacB 1477086 - 1474780 - | ribonuclease r, virulence associated protein VacB-like protein dcuB 1477503 - 1478720 + | anaerobic C4-dicarboxylate transporter TERM 2080 1478740 - 1478773 + F 83 -6.9 -4.82901 | gap 1, opp_overlap 1478740 1478739, overlap 1478743 1478744 ACATAATGTGAGAAG TCGTGCGGAATATATG CAT TATATATTCCGC-CTA TTTTTATCAAAAAAC TERM 2081 1478743 - 1478771 + F 86 -9.7 -4.03995 | opp_overlap 1478740 1478739, overlap 1478740 1478744 TAATGTGAGAAGTCG TGCGGAATATATG CAT TATATATTCCGCC TATTTTTATCAAAAA TERM 2082 1478744 - 1478770 + F 93 -13.2 -3.01915 | opp_overlap 1478740 1478739, overlap 1478743 1478740 AATGTGAGAAGTCGT GCGGAATATATG CAT TATATATTCCGC CTATTTTTATCAAAA dnaA 1478942 - 1480276 + | chromosomal replication initiator protein TERM 2083 1480796 - 1480773 - g 70 -8.2 -3.61764 | GTATGAAGTTTGAAA CTGAAGGCAA CTTA TTGCGTTCAG TAGCAACGGACGGAC dnaN 1480286 - 1481389 + | DNA polymerase III subunit beta HAPS_1503 1481421 - 1481954 + | integral membrane protein TERM 2084 1481980 - 1482002 + G 95 -9.2 -5.40072 | opp_overlap 1481980 CGAATTTTGTGAAAA TCCGCAAG GTATCCG CTTGCGGA TTTTTTTACAACCGA TERM 2085 1482002 - 1481980 - g 83 -9.2 -4.09739 | opp_overlap 1481980 CGAATTTTGTGAAAA TCCGCAAG GTATCCG CTTGCGGA TTTTTTTACAACCGA HAPS_1504 1481954 - 1482247 + | hypothetical protein HAPS_1505 1482343 - 1483122 + | predicted ABC-transport permease corB 1483304 - 1484476 + | putative Mg2+ and Co2+ transporter CorB ffh 1486267 - 1484885 - | signal recognition particle GTPase TERM 2086 1486521 - 1486499 - H 76 -10.6 -2.61274 | overlap 1486498 TTCATCTGAACCAAT TCCCCTCTTT AGC AAAGAGGGGT TAGGGGAGATTTGGC mioC 1486633 - 1487076 + | flavodoxin TERM 2087 1487211 - 1487174 - f 100 -17.3 -4.57341 | gap 1, opp_overlap 1487174 AAGTGTTGGTAAAAA GTGGGCT-AAAGCCTTAT AGT ACAAGGCTTTAAGCCCAC TTTTTGGAATATAAA TERM 2088 1487174 - 1487211 + F 100 -15.1 -4.64766 | gap 1, opp_overlap 1487174 AAGTGTTGGTAAAAA GTGGGC-TAAAGCCTTAT AGT ACAAGGCTTTAAGCCCAC TTTTTGGAATATAAA HAPS_1510 1487367 - 1487480 + | hypothetical protein TERM 2089 1487509 - 1487519 + T 76 -3.2 -5.33465 | TTTTATTCTTAGTTT TGTG CAA CGCA TTGTTTTTTTTTTTT TERM 2090 1487698 - 1487677 - T 100 -15.9 -3.13164 | TTGTCAAGGAGTTAA CTTCCCCCG CTTG CGGGGGAAG TGCCCGAGCGAAAGC TERM 2091 1489892 - 1489876 - T 78 -9.5 -3.56099 | opp_overlap 1489871 GATAACGGCTTTAAA TCAACAC AAC GTGTTGA TGGTAATAATATTGG TERM 2092 1490989 - 1490963 - T 80 -8.6 -3.97947 | overlap 1490964 GTGACCGAGGAGAAA CTGGCCCTGCGG GTC CAGCAGGTCCAA CTGGACCACAAGGTG TERM 2093 1490988 - 1490964 - T 76 -9.9 -2.98447 | overlap 1490963 TGACCGAGGAGAAAC TGGCCCTGCGG GTC CAGCAGGTCCA ACTGGACCACAAGGT TERM 2094 1491753 - 1491711 - T 70 -9 -2.98447 | overlap 1491710 TGACCGAGGAGAAAC TGGTCCAGCGGGACCACGAG GCC CTGCAGGTGCAGCTGGACCA CAAGGTGTACCTGGT TERM 2095 1491836 - 1491818 - T 70 -6.7 -4.02022 | gap 1, overlap 1491811 1491819 GCGAACCAGGACAAA CG-GGTCC AGCA GGACCACG AGGCCCTGTGGGTCC TERM 2096 1491952 - 1491917 - T 84 -10.2 -3.75418 | GAGAGAAAGGTGAAA CTGGCCCAGCGGGTCC AGCA GGTCCTGCGGGTCCAG TAGGTCCTAGAGGCG TERM 2097 1492105 - 1492061 - T 74 -8.3 -3.65425 | opp_overlap 1492060 GCGATAGAGGTGAAA CTGGCCCTGCGGGTCCGATTG GTC CAGTGGGTCCAGCAGGGGCTG CTGGTCCAGCAGGTC TERM 2098 1492247 - 1492225 - T 71 -9 -3.12021 | AAACAAGGTATTCAA GGACCTGCGG GTC CAGCAGGGCC TAGGGGTGAGCGAGG TERM 2099 1492312 - 1492268 - T 88 -10.5 -3.97947 | GTGAGCGAGGAGAAA CTGGCCCTGCAGGTGCAGCTG GTC CTGCTGGTCCAGCAGGAGCAG TGGGCCCTCAAGGTC TERM 2100 1492510 - 1492475 - T 88 -11 -3.77484 | GACCAAAAGGCGAAA CTGGTCCAACAGGTCC AGTG GGTCCAGCAGGACCAG CGGGAGAGCGAGGCG TERM 2101 1492718 - 1492672 - T 76 -9.2 -3.4252 | GGCGATCCAGGACAA GCGGGTCCAGCAGGACCACGAG GCC CTGCAGGTGCAGCTGGACCTGC GGGCCCAGCAGGGCC TERM 2102 1493104 - 1493087 - T 76 -7.7 -4.17701 | gap 1, overlap 1493088 GTCAGAAAGGAGAAA CTGG-CCC TGC GGGTCCAG CAGGGGCTAAGGGTG TERM 2103 1494406 - 1494353 - T 100 -16.3 -3.62096 | gap 1, opp_overlap 1494355 1494357 1494358, overlap 1494358 GTCTACTATGCCAAA TTTAAGGGGCTGACCTAGATTAGCTA GCA TA-CTAATCTAGGTCAGCCCCATTAT TTAATATCTATCTCA TERM 2104 1494355 - 1494405 + T 100 -21.7 -3.92267 | opp_overlap 1494353 1494358, overlap 1494357 1494358 CTACTATGCCAAATT TAA-GGGGCTGACCTAGATTAGCTA GCA TA-CTAATCTAGGTCAGCCCCATTA TTTAATATCTATCTC TERM 2105 1494357 - 1494402 + T 100 -21.5 -4.07595 | gap 1, opp_overlap 1494353 1494358, overlap 1494355 1494358 ACTATGCCAAATTTA AGGGGCTGACCTAGATTAGCTA GCA TA-CTAATCTAGGTCAGCCCCA TTATTTAATATCTAT TERM 2106 1494358 - 1494401 + T 100 -25 -3.03473 | gap 1, opp_overlap 1494353 1494358, overlap 1494357 1494355 CTATGCCAAATTTAA GGGGCTGACCTAGATTAGCTA GCA TA-CTAATCTAGGTCAGCCCC ATTATTTAATATCTA TERM 2107 1494401 - 1494358 - T 100 -25 -3.28497 | gap 1, opp_overlap 1494358 1494357 1494355, overlap 1494353 CTATGCCAAATTTAA GGGGCTGACCTAGATTAGCTA GCA TA-CTAATCTAGGTCAGCCCC ATTATTTAATATCTA cysE 1495225 - 1494419 - | serine acetyltransferase gpsA 1496238 - 1495228 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 2108 1495322 - 1495335 + g 76 -6.7 -4.40561 | opp_overlap 1495321 ATTTGTTCCACAATC GGCAT CTCA ATGCC TTGTTTTTGAGCCAG arcA 1497293 - 1496577 - | aerobic respiration control protein ArcA/two-component response regulator, DNA-binding response regulator in two-component regulatory system with ArcB or CpxA cdd 1498364 - 1497471 - | cytidine deaminase folB 1498810 - 1498463 - | dihydroneopterin aldolase plsY 1498887 - 1499498 + | glycerol-3-phosphate acyltransferase PlsY gidB 1500193 - 1499582 - | methyltransferase, glucose-inhibited division protein B TERM 2109 1499842 - 1499873 + g 81 -6.6 -4.72986 | opp_overlap 1499841 GACTTAGCACAGGAG TGACATTGGTGAGT TTTA GCTCACGAATGGCA TTTTTGATAAAGGTA ppnK 1500666 - 1500229 - | inorganic polyphosphate/ATP-NAD kinase TERM 2110 1500800 - 1500782 - R 100 -9.5 -4.84146 | AGCAGATAAAACAAA GCCCCAC ACAAG GCGGGGC TGTACAGGGTTCGCT gidA 1502778 - 1500967 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 2111 1502977 - 1503012 + H 78 -6.4 -4.54323 | overlap 1502970 TTGAAGATGATCGCT GATCTTAATAAAAATA GATC TATTTATATAAAGATC TTTATTATTGTAGTT HAPS_1521 1503105 - 1503242 + | hypothetical protein fucR 1503379 - 1504125 + | L-fucose operon activator HAPS_1523 1504883 - 1504224 - | putative lipoprotein, genome-derived Neisseria antigen 1162 TERM 2112 1504441 - 1504453 + g 70 -3.4 -4.98616 | GCGAAAGAACCAGCC CCTT CCCAT AAGG TTTTTCCTGTTTTGA TERM 2113 1504766 - 1504781 + g 71 -6.2 -4.18668 | TTGTTGGCATCACTA CCAAAA TTGA TTTTGG TTTGCTATTTTTTAA HAPS_1524 1505240 - 1504893 - | putative lipoprotein, periplasmic protein TERM 2114 1505028 - 1505038 + g 85 -5.4 -5.32699 | ATGCCCATATACACC TGGT GCA ACCA TTTTTTGATGTTTAG csgG 1505924 - 1505250 - | putative lipoprotein, curli production assembly/transport component CsgG TERM 2115 1505967 - 1505955 - H 70 -2.7 -5.17488 | opp_overlap 1505956, overlap 1505956 AAGATGAAAATAAAA CCTAT CAA ATAGA TTTATCAATATTTGA TERM 2116 1507527 - 1507543 + G 84 -10.1 -3.95153 | opp_overlap 1507527 1507526 CTGCTTAGAAAATAC CCGTTGG TGT CCAGCGG TTTATGAATACTTCC fucI 1506241 - 1508007 + | L-fucose isomerase TERM 2117 1508052 - 1508028 - f 81 -7.1 -4.63218 | overlap 1508029 1508030 CCTTTTCTAACAAAA TTTCCCCCTTT GAA AAAGGGGGATT AAGGGGGATTTAAAG TERM 2118 1508051 - 1508029 - f 80 -10.6 -3.3761 | overlap 1508028 1508030 CTTTTCTAACAAAAT TTCCCCCTTT GAA AAAGGGGGAT TAAGGGGGATTTAAA TERM 2119 1508050 - 1508030 - f 93 -14.1 -2.62244 | overlap 1508029 1508028 TTTTCTAACAAAATT TCCCCCTTT GAA AAAGGGGGA TTAAGGGGGATTTAA fucK 1508148 - 1509584 + | L-fuculokinase fucU 1509804 - 1510244 + | fucose operon FucU protein fucA 1510254 - 1510907 + | L-fuculose phosphate aldolase TERM 2120 1510950 - 1510926 - T 93 -12.9 -3.3334 | opp_overlap 1510926 AATGTTATGTTAGAA GGGCGAGTAGC TAA ACTACTCACCC TTTTACTATGAAGCT TERM 2121 1510926 - 1510950 + T 86 -10 -4.3467 | opp_overlap 1510926 AATGTTATGTTAGAA GGGCGAGTAG CTAAA CTACTCACCC TTTTACTATGAAGCT rpiR 1511786 - 1510956 - | RpiR family transcriptional regulator TERM 2122 1511849 - 1511887 + r 100 -14.9 -3.8721 | opp_overlap 1511849 1511854, overlap 1511854 TGTTGCTTTTTAAAT CAAAACACCCCTAATAT TTATC ATATTAGGGGTGTTTTA TGTTTATTTAGTATG TERM 2123 1511887 - 1511849 - R 100 -17.1 -2.71712 | opp_overlap 1511849 1511854, overlap 1511854 TGTTGCTTTTTAAAT CAAAACACCCCTAATAT TTATC ATATTAGGGGTGTTTTA TGTTTATTTAGTATG TERM 2124 1511854 - 1511882 + r 100 -14.8 -4.93454 | opp_overlap 1511849 1511854, overlap 1511849 CTTTTTAAATCAAAA CACCCCTAATAT TTATC ATATTAGGGGTG TTTTATGTTTATTTA TERM 2125 1511882 - 1511854 - R 100 -14.8 -4.54727 | opp_overlap 1511854 1511849, overlap 1511849 CTTTTTAAATCAAAA CACCCCTAATAT TTATC ATATTAGGGGTG TTTTATGTTTATTTA iolC 1513824 - 1511908 - | myoinositol catabolism protein, sugar kinase TERM 2126 1512600 - 1512611 + g 76 -7.2 -4.21631 | CATGAGTTAAACCTT CCGC TTGT GCGG TTTGTTCCATCGCTT TERM 2127 1513897 - 1513882 - H 76 -4.8 -5.01497 | ATCATCATACAAAAA TGAAAT AAAT ATTTCA AATCAAACTTAATTT TERM 2128 1514047 - 1514029 - H 71 -4.7 -4.69048 | ATAAAATGAAATAAA TTTTTCA TAATG TGAAAAA CTGCTTTAATTTTAT TERM 2129 1515041 - 1515024 - g 73 -7.1 -4.13282 | ACGACATCTTCAAAA TGGATTT TCCA AAATCCA GAAGTTTCTTTCTTA iolD 1514082 - 1516016 + | myoinositol catabolism protein, acetolactate synthase TERM 2130 1516066 - 1516017 - f 87 -11.7 -3.61106 | opp_overlap 1516017 1516015 1516018, overlap 1516013 1516020 1516023 GCAAGAAAATATTAA TTACAAGCGGTACGATTTGTAAA ATTT TTTGCAAATCATACCGCTTACAC TCTTTCTATTTATTT TERM 2131 1516017 - 1516066 + F 71 -7.3 -3.83632 | opp_overlap 1516013 1516017 1516020 1516023, overlap 1516015 1516018 GCAAGAAAATATTAA TTACAAGCGGTACGATTTGTAAA ATTT TTTGCAAATCATACCGCTTACAC TCTTTCTATTTATTT TERM 2132 1516018 - 1516065 + F 79 -10.8 -2.87739 | opp_overlap 1516017 1516013 1516020 1516023, overlap 1516017 1516015 CAAGAAAATATTAAT TACAAGCGGTACGATTTGTAAA ATTT TTTGCAAATCATACCGCTTACA CTCTTTCTATTTATT TERM 2133 1516063 - 1516020 - f 100 -15.6 -2.9021 | opp_overlap 1516018 1516017 1516015, overlap 1516017 1516013 1516023 AGAAAATATTAATTA CAAGCGGTACGATTTGTAAA ATTT TTTGCAAATCATACCGCTTA CACTCTTTCTATTTA TERM 2134 1516060 - 1516023 - f 100 -15.1 -3.57161 | opp_overlap 1516018 1516017 1516015, overlap 1516020 1516017 1516013 AAATATTAATTACAA GCGGTACGATTTGTAAA ATTT TTTGCAAATCATACCGC TTACACTCTTTCTAT TERM 2135 1516828 - 1516817 - g 76 -4.4 -5.03145 | GAAGGTGTGAAAAAA GGTA CATT TACC GTTCCGGGTGATGGT iolE 1516100 - 1516996 + | myoinositol catabolism protein with xylose isomerase domain (2-keto-myo-inositol dehydratase) TERM 2136 1517976 - 1517964 - g 70 -2.7 -5.02074 | TTAGCGGCGAAAAAA TCTCT TGA AGAAA ATCGCCCAGTTAAAT iolG 1516998 - 1518008 + | myoinositol 2-dehydrogenase with oxidoreductase domain TERM 2137 1518008 - 1517991 - T 74 -8.5 -3.65199 | opp_overlap 1517991, overlap 1517978 AATCGCCCAGTTAAA TTAAGCG AAGT CGCTTAA TTCTCCCGATACAAG TERM 2138 1517991 - 1518008 + T 70 -8.5 -3.31144 | opp_overlap 1517978 1517991 AATCGCCCAGTTAAA TTAAGCG AAGT CGCTTAA TTCTCCCGATACAAG TERM 2139 1518018 - 1518066 + T 100 -14.1 -5.1963 | opp_overlap 1518023, overlap 1518023 GCTTAATTCTCCCGA TACAAGCGGTACGATTTGGTAAA TTT TTTGCAAAATCGTACCGCTTTCA TTTTTATTAATTAAG TERM 2140 1518061 - 1518023 - T 100 -16.2 -3.48395 | opp_overlap 1518018 1518023 ATTCTCCCGATACAA GCGGTACGATTTGGTAAA TTT TTTGCAAAATCGTACCGC TTTCATTTTTATTAA TERM 2141 1518023 - 1518061 + T 100 -18.4 -4.43037 | opp_overlap 1518023, overlap 1518018 ATTCTCCCGATACAA GCGGTACGATTTGGTAAA TTT TTTGCAAAATCGTACCGC TTTCATTTTTATTAA TERM 2142 1518112 - 1518153 + T 88 -13.3 -2.59101 | opp_overlap 1518124, overlap 1518124 CAAATCAGTATTGGG GACATAAAAAAACCTAGCC ACTT GGCTAGGTTTTTTTATTTA TAGCTTAGATTATTT TERM 2143 1518124 - 1518141 + T 100 -11.3 -6.02919 | opp_overlap 1518124, overlap 1518112 GGGGACATAAAAAAA CCTAGCC ACTT GGCTAGG TTTTTTTATTTATAG TERM 2144 1518141 - 1518124 - T 100 -11.3 -5.71712 | opp_overlap 1518112 1518124 GGGGACATAAAAAAA CCTAGCC ACTT GGCTAGG TTTTTTTATTTATAG celB 1519509 - 1518163 - | PTS system, cellobiose-specific IIC component alfA 1520848 - 1519511 - | alpha-L-fucosidase TERM 2145 1520913 - 1520880 - R 82 -6.8 -5.05601 | overlap 1520883 TAGCATACATAAAAA TAAGGTCCGCATAT ATTGTG ATATGCAGACCCTT CCGATTTCATATTAA TERM 2146 1520910 - 1520883 - R 95 -10.7 -4.61353 | overlap 1520880 CATACATAAAAATAA GGTCCGCATAT ATTGTG ATATGCAGACC CTTCCGATTTCATAT HAPS_1537 1522058 - 1520925 - | dehydrogenase TERM 2147 1521891 - 1521905 + g 78 -2.8 -5.36441 | opp_overlap 1521891 TGTTGCTCGAGCAAA GCCAAA TTC TTTCGC TTTTTTCTCTGCAAG rbsC 1522815 - 1522153 - | ABC fused D-ribose transporter, permease/membrane component rbsA 1524665 - 1523151 - | ABC fused D-ribose transporter, ATP-binding protein TERM 2148 1524771 - 1524727 - R 95 -8.2 -4.79955 | gap 1, opp_overlap 1524722 1524734, overlap 1524729 1524734 AGATTGAGAATAAAA GAGATAACTTATTAAAGGGTG AATC CACCCTTTAATAAGTT-TATG GTTAATTATTTATAT TERM 2149 1524771 - 1524729 - R 91 -11.7 -4.01115 | gap 1, opp_overlap 1524722 1524734, overlap 1524727 1524734 ATTGAGAATAAAAGA GAT-AACTTATTAAAGGGTG AATC CACCCTTTAATAAGTTTATG GTTAATTATTTATAT TERM 2150 1524765 - 1524734 - R 100 -17.6 -3.89068 | opp_overlap 1524734 1524722, overlap 1524727 1524729 GAATAAAAGAGATAA CTTATTAAAGGGTG AATC CACCCTTTAATAAG TTTATGGTTAATTAT TERM 2151 1524734 - 1524765 + r 100 -17.6 -4.10934 | opp_overlap 1524727 1524729 1524734, overlap 1524722 GAATAAAAGAGATAA CTTATTAAAGGGTG AATC CACCCTTTAATAAG TTTATGGTTAATTAT rbsD 1525709 - 1524777 - | ABC fused D-ribose transporter, periplasmic sugar-binding protein TERM 2152 1525054 - 1525078 + g 85 -2.9 -5.7946 | overlap 1525067 CCAATTGCCATCTCA TCATTGTTACT TGC AATAACATTGA TTTTTTTGTTAGCGG TERM 2153 1525975 - 1525998 + r 85 -3.9 -5.70829 | opp_overlap 1525975, overlap 1525978 GTTTTTGGGAAAAAA TAACCTAAC GTTGAA GTTAGGCTA TTTTTTTATAGTGTT TERM 2154 1525998 - 1525975 - R 80 -6.1 -5.00616 | opp_overlap 1525975 1525978 GTTTTTGGGAAAAAA TAACCTAAC GTTGAA GTTAGGCTA TTTTTTTATAGTGTT HAPS_1541 1527537 - 1526026 - | methylmalonate semialdehyde dehydrogenase iolB 1527757 - 1528572 + | myo-inositol catabolism IolB domain-containing protein HAPS_1545 1529466 - 1529203 - | protein involved in oxidation of intracellular sulfur TERM 2155 1529241 - 1529279 + g 75 -9.7 -3.2819 | gap 1, opp_overlap 1529248, overlap 1529242 1529245 ACTTCTCCGTCAATT GCACCAACATTGCCAGCG AGAT TGTTGGCAATG-TGGTGG TTAATCCTCTTGCCT TERM 2156 1529242 - 1529278 + g 90 -13.2 -2.56432 | gap 1, opp_overlap 1529248, overlap 1529241 1529245 CTTCTCCGTCAATTG CACCAACATTGCCAGCG AGAT TGTTGGCAATG-TGGTG GTTAATCCTCTTGCC TERM 2157 1529245 - 1529276 + g 73 -10.2 -2.81702 | opp_overlap 1529248, overlap 1529242 1529241 CTCCGTCAATTGCAC CAACATTGCCAGCG AGAT TGTTGGCAATGTGG TGGTTAATCCTCTTG dsrF 1529847 - 1529476 - | possible sulfur oxidation protein DsrF tusD 1530202 - 1529849 - | sulfurtransferase TusD-like protein involved in intracellular sulfur reduction yheO 1530858 - 1530202 - | YheO domain-containing protein involved in signalling based on the presence of this PAS domain TERM 2158 1530907 - 1530885 - R 100 -12.8 -5.15526 | opp_overlap 1530887 ACATAAAATTAAAAA TAAGGGCACA AAT TGTGCCCCTA TAATGCGTTTAAGTA fkpA 1531645 - 1530926 - | FKBP-type peptidyl-prolyl cis-trans isomerase, macrophage infectivity protein TERM 2159 1531486 - 1531474 - G 83 -3.4 -5.55769 | opp_overlap 1531481, overlap 1531475 GGTTATAAGAAAAAA TCTC TTTTT GAGA GCTAATAACTCTCTC slyX 1531738 - 1531962 + | slyX-like protein HAPS_1551 1531999 - 1532664 + | thiol disulfide oxidoreductase mtn 1532661 - 1533353 + | MTA/SAH nucleosidase TERM 2160 1533459 - 1533483 + F 91 -9.3 -4.60886 | overlap 1533462 TACAATTCCATTCCT TTAGCCTATGC TTT GCATAGGCTTG TTTATTTGATTATCT TERM 2161 1533462 - 1533480 + F 100 -13.2 -4.38369 | overlap 1533459 AATTCCATTCCTTTA GCCTATGC TTT GCATAGGC TTGTTTATTTGATTA yliG 1533518 - 1534849 + | MiaB-like tRNA modifying enzyme YliG glyQ 1535272 - 1536177 + | glycyl-tRNA synthetase subunit alpha TERM 2162 1536188 - 1536214 + F 100 -13.8 -3.6608 | opp_overlap 1536182 1536180 AGTAAAATCTCCCCC TACCCCCTCTTT GTC AAAGAGGGGGAA TTTGAATGAGGTAAT HAPS_1555 1536231 - 1536497 + | glutaredoxin-related protein TERM 2163 1536486 - 1536502 + F 73 -9.5 -2.82602 | opp_overlap 1536483, overlap 1536483 GAGTTGGAGAGATTT TGCAATC AGT GATTGCA TAATTGAATTTAATG HAPS_1556 1536579 - 1537211 + | hypothetical protein TERM 2164 1537268 - 1537313 + F 80 -11.2 -3.19246 | opp_overlap 1537291 TGCAAATTTTTTCAA TTCGGTACGCAATGCGTCTC AAATTC GGAACTCACTGCGTACCGAA TTGAATTAGAGTTGA HAPS_1557 1537371 - 1537742 + | hypothetical protein TERM 2165 1537915 - 1537893 - f 76 -10.6 -2.61274 | overlap 1537892 TTCATCTGAACCAAT TCCCCTCTTT AGC AAAGAGGGGT TAGGGGAGATTTGGC HAPS_1558 1537987 - 1538460 + | putative phage associated protein TERM 2166 1538449 - 1538464 + F 71 -4.8 -4.62069 | opp_overlap 1538449 TGGATTCCAAAAGTA TTCTTT ATTT AAAGAA TTTTTAGCATAAGAG TERM 2167 1538531 - 1538506 - g 83 -7.5 -4.76193 | AATGACAACACAAAA CTTCCTCGCCG AGAT CGGCACAGAAG AGTTGCCACCGAAGG TERM 2168 1539467 - 1539455 - g 77 -4.8 -4.90013 | opp_overlap 1539455 GAAGGGAACGAAAAA GTGG TTCGC CCAC GTTTGACCGATGCAG glyS 1538492 - 1540561 + | glycyl-tRNA synthetase subunit beta TERM 2169 1540603 - 1540569 - f 84 -8 -4.57882 | opp_overlap 1540576, overlap 1540576 TGCAATAATAACAAA TGATAAAGCCCTATTC ACA AAATAGGGCTTTTTTA TGGTGGTAGAATGGA TERM 2170 1540576 - 1540596 + F 100 -9.8 -5.32882 | opp_overlap 1540569 1540576 ATAACAAATGATAAA GCCCTATT CACAA AATAGGGC TTTTTTATGGTGGTA TERM 2171 1540596 - 1540576 - f 90 -10.5 -4.21885 | opp_overlap 1540576, overlap 1540569 ATAACAAATGATAAA GCCCTATTC ACA AAATAGGGC TTTTTTATGGTGGTA bioA 1540614 - 1541900 + | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 2172 1542310 - 1542320 + G 89 -6.8 -5.1925 | overlap 1542317 GACGGCATTCGACTT TCCG GGG CGGA TTTTTTCCGTTATAA bioF 1541893 - 1543035 + | 8-amino-7-oxononanoate synthase TERM 2173 1543563 - 1543552 - g 73 -5.8 -4.57569 | opp_overlap 1543543 GTAGTGTGGCAAAAA GCCA TTAT TGGC AACAAAGATAAAATT bioD 1543048 - 1543713 + | dithiobiotin synthetase bioC 1543704 - 1544477 + | biotin synthesis protein bioD 1544467 - 1545111 + | dithiobiotin synthetase HAPS_1565 1545134 - 1545424 + | hypothetical protein TERM 2174 1546152 - 1546112 - g 93 -10.5 -5.14563 | TTGGCGATGAAAAAA TGGGGGCAAAAGCAAGCAT TGG ATACCCACCTTCACCCCCA TAAATTACGCCACTC xerC 1545548 - 1546333 + | possible site-specific tyrosine recombinase XerC rpoH 1546391 - 1547338 + | RNA polymerase factor sigma-32 TERM 2175 1547507 - 1547537 + T 74 -9.2 -3.06796 | opp_overlap 1547507 1547508 TGAGATGAAGCTAAA TGGGTAATACAAAT TTT ATTTGTATTACCAG TTAGATAGACTAAAC TERM 2176 1547536 - 1547507 - T 78 -8.9 -3.79787 | gap 1, opp_overlap 1547507, overlap 1547508 TGAGATGAAGCTAAA TGGGTAATACAAAT TTT ATTTGTATTACC-A GTTAGATAGACTAAA TERM 2177 1547536 - 1547508 - T 77 -10.5 -2.8739 | opp_overlap 1547507, overlap 1547507 GAGATGAAGCTAAAT GGGTAATACAAAT TTT ATTTGTATTACCA GTTAGATAGACTAAA cjrC 1549853 - 1547610 - | putative outer membrane colicin Js receptor cjrA 1550669 - 1549869 - | putative iron-regulated lipoprotein TERM 2178 1550679 - 1550658 - G 70 -5.9 -4.40132 | ACCAACGATAAGAAA CAGGCTAAT CATA ATCAACCTG CGAATTAACAAAAAC TERM 2179 1550719 - 1550733 + r 80 -5.8 -4.9138 | opp_overlap 1550719 1550718 ATTAAAAAAATCAAT TGATAA TAA TTATCA TTTTATTTAAGTGCT hmuV 1551565 - 1550777 - | hemin transport system ATP-binding protein HmuV hmuU 1552551 - 1551565 - | hemin transport system permease protein HmuU hmuT 1553387 - 1552551 - | hemin transport system periplasmic protein HmuT smf 1554567 - 1553440 - | Smf protein, Rossmann fold nucleotide-binding protein involved in DNA uptake TERM 2180 1553993 - 1554018 + g 78 -4.1 -5.24129 | gap 1, opp_overlap 1553987 GACACTAACGCACCG CTTGTTGCAACG ATT TGTT-CAGCAAG TTTTTTATGGCGAGC TERM 2181 1555404 - 1555377 - g 85 -4.1 -5.68438 | overlap 1555378 GTATCAAAGAAAAAA TGCTCAAACTG AAAAAA CAGATTGAGCG TGCGAAATAAAGGAG TERM 2182 1555403 - 1555378 - g 73 -7.6 -3.99436 | overlap 1555377 TATCAAAGAAAAAAT GCTCAAACTG AAAAAA CAGATTGAGC GTGCGAAATAAAGGA def 1554902 - 1555414 + | N-formylmethionyl-tRNA deformylase TERM 2183 1555488 - 1555504 + G 90 -9.5 -4.3129 | opp_overlap 1555486 TAAGGCGTTAAATGC TATCGGT AGA ACCGATA TTTTGGTGGTAGATA TERM 2184 1555822 - 1555857 + G 73 -2 -5.33405 | gap 1, opp_overlap 1555822, overlap 1555822 1555825 1555830 ATTGAAGAGAGAAAA TTT-GAACAGCCGTTAA ATG TTTATGGCTATTCTAAA TTTTTGTTTGATGAA rfaD 1555426 - 1556352 + | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 2185 1556360 - 1556388 + F 100 -11.9 -4.46775 | opp_overlap 1556355 1556360 ATAGATAAAATGCAA GCGGTAAGATT GAGCTGA AATCTTACCGC TTTGTCTTTTAGATG TERM 2186 1556388 - 1556360 - f 89 -11.9 -3.44377 | opp_overlap 1556360, overlap 1556355 ATAGATAAAATGCAA GCGGTAAGATT GAGCTGA AATCTTACCGC TTTGTCTTTTAGATG TERM 2187 1556513 - 1556503 - g 73 -6.8 -4.15201 | AGTAACTAAAGCAAA CCCA ACT TGGG TAGATCATCAACGAA HAPS_1576 1556444 - 1556587 + | hypothetical protein TERM 2188 1556920 - 1556910 - T 73 -5.4 -4.66535 | opp_overlap 1556912, overlap 1556912 AATTTTGAAAATAAA TTCC AGT GGAA GCCTCAGGTTTTTAT TERM 2189 1557204 - 1557183 - T 73 -2.3 -5.39755 | overlap 1557195 TACAATGATAAAAAA CAAAATCGT AAAC ACCATTTCG GCGCTTTTTACGACT HAPS_1578 1557814 - 1557656 - | hypothetical protein TERM 2190 1558003 - 1558027 + r 73 -7.2 -4.12603 | opp_overlap 1558003 AAAGCCCACAAAAAA GCCCTACATT CAAAA AATGTAAGGC TTATTATTTAGTACA TERM 2191 1558027 - 1558003 - R 100 -10.1 -5.28826 | opp_overlap 1558003 AAAGCCCACAAAAAA GCCCTACATTC AAA AAATGTAAGGC TTATTATTTAGTACA HAPS_1579 1558427 - 1558035 - | XRE family transcriptional regulator HAPS_1580 1558724 - 1558455 - | bacteriophage protein/plasmid stabilization system protein TERM 2192 1559324 - 1559301 - R 91 -5.2 -5.88197 | opp_overlap 1559301 GCAAAGATAAAAAAA GAGCTAACCA TCTC TGGAAAGCTC TTAAATCATCAATGT HAPS_1581 1561574 - 1559388 - | putative prophage primase TERM 2193 1561395 - 1561410 + g 73 -10.4 -2.78816 | opp_overlap 1561394 1561393 TGTCAGTACAATAGG GGGCGA TTTC TCGCCC TGTGGTAACACATCA TERM 2194 1561773 - 1561793 + r 81 -6.9 -4.56367 | ATTCCGCCACTTTTA GCGTATC AGTCATA GATACGC TTTCTTTGTGAAATA HAPS_1583 1562360 - 1561947 - | phage small subunit terminase HAPS_1584 1562698 - 1562348 - | hypothetical protein HAPS_1585 1562925 - 1562809 - | hypothetical protein TERM 2195 1563077 - 1563055 - R 93 -7.7 -5.07275 | opp_overlap 1563054 1563057 1563059, overlap 1563059 TGAGAGAGATAAAAA TAAACCGCC ATAAA GGCGGTATA GTTTATTGCGATAAA TERM 2196 1563073 - 1563059 - R 95 -8.5 -5.02777 | opp_overlap 1563059 1563057 1563054, overlap 1563055 AGAGATAAAAATAAA CCGCC ATAAA GGCGG TATAGTTTATTGCGA HAPS_1586 1563406 - 1563080 - | hypothetical protein TERM 2197 1563112 - 1563128 + g 79 -5.1 -5.04597 | overlap 1563114 TTTTAATGGTGTTTT TTGAGAC TAC GTCTCTA TTTTTATGTGTGAGT TERM 2198 1563114 - 1563126 + g 77 -7.7 -4.14422 | overlap 1563112 TTAATGGTGTTTTTT GAGAC TAC GTCTC TATTTTTATGTGTGA TERM 2199 1563289 - 1563304 + g 83 -3.2 -5.58179 | TTAAATGCGTATTTT GTACCT GTTC AGGTTC TTTTTTATTATCATC TERM 2200 1563942 - 1563932 - R 85 -2.6 -5.93252 | TTTAAAAAGAAAAAA TTTT GTA AAAA AATCACAATAAAAAA TERM 2201 1563978 - 1563959 - R 100 -8.6 -5.89921 | opp_overlap 1563959 ATCACAATAAAAAAA GCCTAGCT GTAA AACTAGGC TTAATCGGTACTTAT HAPS_1587 1565240 - 1563990 - | phage integrase family site specific recombinase TERM 2202 1566295 - 1566316 + G 72 -8.7 -3.58533 | GCAAGTTGGTTGAAG TGGGTACGA CAAA TCGCACCCA TTTAAAAGATTATCG selA 1565700 - 1567085 + | selenocysteine synthase selB 1567082 - 1568932 + | selenocysteine-specific elongation factor TERM 2203 1569314 - 1569331 + T 78 -7.7 -4.35524 | GTCAGCGGTCCGCTC CCCGATG GAAA CATTGGG TTTTGCATTTAGGAG HAPS_1591 1569638 - 1569378 - | XRE family transcriptional regulator TERM 2204 1570034 - 1570054 + H 100 -10.5 -5.58074 | TTTCTAATAGTTTTA TGGCGTTCA CTT TGAATGCCA TTTTTTTAATAATTA TERM 2205 1570152 - 1570177 + H 100 -12.7 -4.55491 | CCGAATTTCGCATAC TGGCTAGATGA ATTT TCGTCTAGCCA TTTTGTGCTTGAATA TERM 2206 1571403 - 1571387 - g 71 -9.5 -2.7976 | overlap 1571386 TTCAACAGGTGAAAT TGTTTGC CCA GCAAACA GCGAGATCGGTTTAG TERM 2207 1574391 - 1574381 - g 70 -3.2 -4.91459 | overlap 1574369 GAAGATGTACAAAAA CATC GTG GACG GTACACACTATATGG rpoB 1570461 - 1574489 + | DNA-directed RNA polymerase subunit beta TERM 2208 1574552 - 1574499 - f 100 -17.5 -3.61089 | opp_overlap 1574501, overlap 1574500 GCGTAAGAACGACAA TTTGTAGGGACGCACTGCGTGCGTC CGTG GACACACTCAGTGTGTCCCTACATT CGTTCCCACAAGCGG TERM 2209 1574551 - 1574500 - f 100 -21 -2.76171 | opp_overlap 1574501, overlap 1574499 CGTAAGAACGACAAT TTGTAGGGACGCACTGCGTGCGTC CGTG GACACACTCAGTGTGTCCCTACAT TCGTTCCCACAAGCG TERM 2210 1574501 - 1574550 + F 100 -24.5 -3.33696 | opp_overlap 1574500 1574499 GTAAGAACGACAATT TGTAGGGACGCACTGCGTGCGTC CGTG GACACACTCAGTGTGTCCCTACA TTCGTTCCCACAAGC HAPS_1593 1574575 - 1574691 + | hypothetical protein TERM 2211 1575162 - 1575148 - g 77 -5 -4.99035 | overlap 1575159 1575160 GGATTTAGAGAAAAA TCAGTT ATT AACCGA AGAACAGTTCTTAGA TERM 2212 1578827 - 1578837 + G 73 -6.8 -4.20868 | opp_overlap 1578824 AGCGTAGCACAAGCG GCAG TTT CTGC TTCTTCTTTTGCAAC rpoC 1574675 - 1578958 + | DNA-directed RNA polymerase subunit beta' TERM 2213 1579003 - 1579030 + T 100 -12.8 -4.72986 | opp_overlap 1579003 TGTTAAAATGGAAAA GCCCTCAGAACT GTGA AGTTTTGGGGGC TTTTTGATGCAGATA TERM 2214 1579030 - 1579003 - T 86 -8.4 -4.4267 | opp_overlap 1579003 TGTTAAAATGGAAAA GCCCTCAGAACT GTGA AGTTTTGGGGGC TTTTTGATGCAGATA TERM 2215 1579180 - 1579143 - T 100 -11.5 -4.99035 | opp_overlap 1579153, overlap 1579147 1579148 GCATTTACATAAAAA TACAGGCATAGTAGACA AATT TGTCTACTATGCTCATA GTGAGAAACTCTCTA TERM 2216 1579176 - 1579147 - T 90 -12.3 -3.64281 | opp_overlap 1579153, overlap 1579143 1579148 TTACATAAAAATACA GGCATAGTAGACA AATT TGTCTACTATGCT CATAGTGAGAAACTC TERM 2217 1579175 - 1579148 - T 100 -15.8 -2.77484 | opp_overlap 1579153, overlap 1579147 1579143 TACATAAAAATACAG GCATAGTAGACA AATT TGTCTACTATGC TCATAGTGAGAAACT recF 1580329 - 1579244 - | DNA replication and repair protein RecF TERM 2218 1580008 - 1580018 + g 76 -3.2 -5.24551 | opp_overlap 1580004 GAAGAAGATAGGCTA GGTC AGC GATC TTTTTATTACTTTCC HAPS_1596 1580719 - 1580372 - | hypothetical protein TERM 2219 1580708 - 1580718 + g 72 -3.2 -5.03227 | TCTGCGATTACGAAT TGGT TGA GCCA TTTTCTTTCTCCTAT trmB 1581493 - 1580744 - | tRNA (guanine-N(7))-methyltransferase TERM 2220 1580921 - 1580964 + g 75 -10.3 -3.14564 | overlap 1580926 CTCGGCGTAGTTTTC CCAGTCTGTCGCAAAATGG ATAAAA CCATTCGGCGACAGTTTGG TTAATACACGGGTAA TERM 2221 1580926 - 1580959 + g 83 -9.6 -3.95584 | overlap 1580921 CGTAGTTTTCCCAGT CTGTCGCAAAATGG ATAAAA CCATTCGGCGACAG TTTGGTTAATACACG fabH 1582426 - 1581509 - | 3-oxoacyl-(acyl carrier protein) synthase III HAPS_1599 1583521 - 1582550 - | ISNme5, family IS110 TERM 2222 1582679 - 1582708 + g 88 -11.5 -3.53761 | opp_overlap 1582707 GACTTTCTTCGCTTT GCCTTTTGCAACC AATC GGGTGTAAAAGGC TTTAAAAACAGGTTC TERM 2223 1583706 - 1583680 - H 84 -11.6 -3.11326 | overlap 1583683 1583684 1583691 TATAATTTTAATATA CAAGGGACACAC TGC GTGTGTCCGCTG AATGAATGAACAACG TERM 2224 1583703 - 1583683 - H 84 -9.7 -3.6914 | overlap 1583680 1583684 1583691 AATTTTAATATACAA GGGACACAC TGC GTGTGTCCG CTGAATGAATGAACA TERM 2225 1583702 - 1583684 - H 90 -13.2 -2.80761 | overlap 1583683 1583680 1583691 ATTTTAATATACAAG GGACACAC TGC GTGTGTCC GCTGAATGAATGAAC TERM 2226 1583758 - 1583738 - H 84 -9.7 -3.76884 | overlap 1583739 ATACACGATGAATAA CGGACACAC GCA GTGTGTCCC AGGCTGCTGACAAAC TERM 2227 1583757 - 1583739 - H 90 -13.2 -2.85407 | overlap 1583738 TACACGATGAATAAC GGACACAC GCA GTGTGTCC CAGGCTGCTGACAAA TERM 2228 1583890 - 1583910 + H 84 -9.7 -3.6914 | overlap 1583891 CTTTGTCAATGATCT CGGACACAC GCA GTGTGTCCC TTGTATATTAAAATT TERM 2229 1583891 - 1583909 + H 90 -13.2 -2.80761 | overlap 1583890 TTTGTCAATGATCTC GGACACAC GCA GTGTGTCC CTTGTATATTAAAAT TERM 2230 1584914 - 1584885 - g 88 -11.5 -3.53761 | opp_overlap 1584865 GAACCTGTTTTTAAA GCCTTTTACACCC GATT GGTTGCAAAAGGC AAAGCGAAGAAAGTC HAPS_1600 1584072 - 1585043 + | ISNme5, family IS110 TERM 2231 1585119 - 1585094 - T 71 -6.9 -3.9654 | gap 1, opp_overlap 1585094 1585097, overlap 1585084 1585092 1585096 1585097 CAAATTCTAAAAATA GAGTGGACACAC GCA GTGTGTCC-CTA CTTGATAATTTTCCT TERM 2232 1585117 - 1585096 - T 78 -9.5 -3.55528 | gap 1, opp_overlap 1585094 1585097, overlap 1585094 1585092 1585097 AATTCTAAAAATAGA GTGGACACAC GCA GTGTGTCC-C TACTTGATAATTTTC TERM 2233 1585097 - 1585117 + T 75 -9.7 -2.84344 | opp_overlap 1585096 1585094 1585092 1585097, overlap 1585094 ATTCTAAAAATAGAG TGGACACAC GCA GTGTGTCCC TACTTGATAATTTTC TERM 2234 1585117 - 1585097 - T 74 -9.7 -2.72233 | opp_overlap 1585097 1585094, overlap 1585096 1585094 1585092 ATTCTAAAAATAGAG TGGACACAC GCA GTGTGTCCC TACTTGATAATTTTC pyrAB 1586337 - 1585159 - | carbamoylphosphate synthase large subunit (split gene in MJ)/ATP-dependent carboxylate-amine ligase domain-containing protein TERM 2235 1586464 - 1586422 - R 72 -8.2 -3.56251 | gap 1, opp_overlap 1586427, overlap 1586426 1586427 GAAATATTGATAGAA TAAATGGCATTTCTATATT GGAATT AATATAAAAATGCC-TTTA AAAATGTTTTAAATA TERM 2236 1586461 - 1586426 - R 79 -7.1 -4.39998 | opp_overlap 1586427, overlap 1586422 1586427 TATTGATAGAATAAA TGGCATTTCTATATT GGAATT AATATAAAAATGCCT TTAAAAATGTTTTAA TERM 2237 1586460 - 1586427 - R 79 -10.6 -3.23276 | opp_overlap 1586427, overlap 1586426 1586422 ATTGATAGAATAAAT GGCATTTCTATATT GGAATT AATATAAAAATGCC TTTAAAAATGTTTTA TERM 2238 1586427 - 1586460 + r 75 -9.1 -3.63589 | opp_overlap 1586426 1586422 1586427 ATTGATAGAATAAAT GGCATTTCTATATTG GAAT TAATATAAAAATGCC TTTAAAAATGTTTTA fumC 1587913 - 1586519 - | fumarate hydratase TERM 2239 1587972 - 1587957 - R 74 -7.6 -3.87378 | AAATCAATGAGTAAA TCCTAG CATT CTAGGA AAAAGAAAGGAATGG TERM 2240 1587981 - 1588002 + r 75 -8.8 -3.6185 | opp_overlap 1587981, overlap 1587976 TCTAGGAAAAAGAAA GGAATGGA AATTGC TCCATTCC TTGTCCGTTTTTTTA TERM 2241 1588002 - 1587981 - R 100 -9.5 -4.91852 | opp_overlap 1587976 1587981 TCTAGGAAAAAGAAA GGAATGGAA ATTG CTCCATTCC TTGTCCGTTTTTTTA tfoX 1588698 - 1588060 - | DNA transformation protein, regulator of competence-specific genes HAPS_1604 1588980 - 1588846 - | hypothetical protein rpsJ 1589157 - 1589468 + | 30S ribosomal protein S10 rplC 1589485 - 1590111 + | 50S ribosomal protein L3 rplD 1590127 - 1590729 + | 50S ribosomal protein L4 TERM 2242 1590765 - 1590753 - g 75 -7.7 -4.08692 | GAACGTTTGCTAAAA GTGCT TAA AGCAC CACATATCTCTGAGA rplW 1590726 - 1591031 + | 50S ribosomal protein L23 rplB 1591052 - 1591873 + | 50S ribosomal protein L2 rpsS 1591902 - 1592177 + | 30S ribosomal protein S19 rplV 1592188 - 1592520 + | 50S ribosomal protein L22 rpsC 1592538 - 1593242 + | 30S ribosomal protein S3 rplP 1593255 - 1593665 + | 50S ribosomal protein L16 rpmC 1593665 - 1593856 + | 50S ribosomal protein L29 rpsQ 1593856 - 1594110 + | 30S ribosomal protein S17 TERM 2243 1594157 - 1594124 - f 91 -6.7 -5.3321 | opp_overlap 1594130, overlap 1594125 1594130 AATCAACAATAAAAA TTAAAACCCCTAGCA GAAA TGCTGGGGGTTTTTG TTTTTTTCACGATTG TERM 2244 1594156 - 1594125 - f 84 -10.2 -3.77486 | opp_overlap 1594130, overlap 1594124 1594130 ATCAACAATAAAAAT TAAAACCCCTAGCA GAAA TGCTGGGGGTTTTT GTTTTTTTCACGATT TERM 2245 1594130 - 1594151 + F 100 -12.3 -5.86609 | opp_overlap 1594125 1594124 1594130 CAATAAAAATTAAAA CCCCTAGCA GAAA TGCTGGGGG TTTTTGTTTTTTTCA TERM 2246 1594151 - 1594130 - f 100 -10.1 -4.86293 | opp_overlap 1594130, overlap 1594125 1594124 CAATAAAAATTAAAA CCCCTAGCA GAAA TGCTGGGGG TTTTTGTTTTTTTCA TERM 2247 1594223 - 1594240 + F 73 -3.5 -5.13344 | gap 1, opp_overlap 1594223 1594222, overlap 1594224 CTTAATAAAGTAAAC T-TGTAGC AAA GCTACATA TTTTTATATTAATAT TERM 2248 1594224 - 1594238 + F 83 -8.6 -4.18115 | opp_overlap 1594223 1594222, overlap 1594223 TTAATAAAGTAAACT TGTAGC AAA GCTACA TATTTTTATATTAAT nanH 1594826 - 1596832 + | neuraminidase/exo-alpha-sialidase nanH TERM 2249 1596901 - 1596878 - T 71 -8.9 -3.18274 | CCCATTTCAACTTAA CGGTGATCG TCTAAG CGATCACCA AAATCAATCATAAAT TERM 2250 1597238 - 1597265 + T 74 -4.2 -4.90869 | gap 1 TTTTTAGGTTTTTGG CAAATTC-CGCTT CCA AGGCGTGAAGTTG TTTTTCGTTCATAAT TERM 2251 1597320 - 1597285 - T 83 -7.1 -4.77165 | gap 1, opp_overlap 1597285 TCGTTCATAATAAAA TACCTGTGTCTGA-AT GTATT ATCTCAGAAACAGGTA TTTACACAAATTGTG HAPS_1618 1599190 - 1597394 - | di- and tricarboxylate transporter/DASS family divalent anion:sodium (Na+) symporter TERM 2252 1598003 - 1598017 + g 70 -7.8 -3.64703 | TGGTGCTGCGTGTTT GCTCTC TTC GGGAGC TTTGAGTAGGAAGAA TERM 2253 1599409 - 1599419 + H 79 -8.2 -4.07687 | opp_overlap 1599407 1599409 GAAGTGTTCACAAGA GCCC TTT GGGC TTTTACCAACAAAAT TERM 2254 1599968 - 1599986 + G 77 -6 -4.55485 | opp_overlap 1599970, overlap 1599970 1599972 GTGGCATTTAAAAGT TATGGTGC TAT GCACTATG TTTCGTTTTTTTGTG atpI 1599680 - 1600066 + | F0F1 ATP synthase subunit I/H(+)-transporting two-sector ATPase, F(0) subunit I atpB 1600095 - 1600886 + | F0F1 ATP synthase subunit A/H(+)-transporting two-sector ATPase, F(0) subunit A atpE 1601027 - 1601281 + | F0F1 ATP synthase subunit C/H(+)-transporting two-sector ATPase, F(0) subunit C atpF 1601343 - 1601813 + | F0F1 ATP synthase subunit B/H(+)-transporting two-sector ATPase, F(1) beta subunit TERM 2255 1602211 - 1602200 - g 75 -5.8 -4.7219 | CACAGGAAGATAAAA TCGC TAAA GCGA TGAAACAAAAGCTAA atpH 1601827 - 1602360 + | F0F1 ATP synthase subunit delta/H(+)-transporting two-sector ATPase, F(1) delta subunit TERM 2256 1603663 - 1603651 - g 77 -6.3 -4.61231 | TCACACGGTCAAAAA GTAAC AGA GTTAC TTAAACAGAAACAAT atpA 1602373 - 1603914 + | F0F1 ATP synthase subunit alpha/H(+)-transporting two-sector ATPase, (F1) alpha subunit TERM 2257 1604043 - 1604031 - g 77 -7.7 -4.18018 | TTGCTGCATCTAAAA TGCGT AAA ACGCA AGAAAGAATGTCTGC TERM 2258 1604803 - 1604773 - g 73 -7.6 -4.01419 | opp_overlap 1604778, overlap 1604778 TACGAATGAATTAAA TGAAATTGTCGCGG GTG CCGCAGCAATTTAA CAATGAATAGAGGAA TERM 2259 1604798 - 1604778 - g 76 -7.5 -4.15201 | opp_overlap 1604778, overlap 1604773 ATGAATTAAATGAAA TTGTCGCGG GTG CCGCAGCAA TTTAACAATGAATAG atpG 1603937 - 1604803 + | F0F1 ATP synthase subunit gamma/H(+)-transporting two-sector ATPase, (F1) gamma subunit atpD 1604824 - 1606197 + | F0F1 ATP synthase subunit beta/H(+)-transporting two-sector ATPase, F(1) beta subunit atpC 1606224 - 1606640 + | F0F1 ATP synthase subunit epsilon/H(+)-transporting two-sector ATPase, F(1) epsilon subunit TERM 2260 1606656 - 1606681 + F 100 -11.3 -5.38054 | opp_overlap 1606656 TTTTATATACAGAAA CGCCTTAATAT GTTT ATATTAGGGCG TTTTTATTTCTCAGC TERM 2261 1606681 - 1606656 - f 81 -9.1 -4.17296 | opp_overlap 1606656 TTTTATATACAGAAA CGCCTTAATAT GTTT ATATTAGGGCG TTTTTATTTCTCAGC rbsR 1606715 - 1607704 + | ribose operon repressor TERM 2262 1607779 - 1607798 + F 81 -7.2 -4.58663 | overlap 1607780 TTGTCTATCTTTTAG TCATCGAA ACGT TTCGATGG TTTTTAAAGGATGGT TERM 2263 1607780 - 1607797 + F 70 -8.5 -3.34716 | overlap 1607779 TGTCTATCTTTTAGT CATCGAA ACGT TTCGATG GTTTTTAAAGGATGG rbsD 1607819 - 1608238 + | ABC-type ribose transport system, auxiliary component (D-ribose pyranase) rbsA 1608248 - 1609747 + | ABC D-ribose transporter ATP binding protein RbsA rbsC 1609759 - 1610718 + | ABC D-ribose transporter permease protein RbsC TERM 2264 1610914 - 1610900 - g 82 -4.2 -5.36441 | GGTGCAGAGAAAAAA GCCAAA GAA TTAGGC TATAACTTAGTTGTT TERM 2265 1611127 - 1611104 - g 74 -6 -4.41348 | overlap 1611117 CGTGGTGCAAATAAA GGCAATGTAG TAAG CCATATTGCC TCCGATAACGTAGCA TERM 2266 1611195 - 1611180 - g 81 -5.4 -5.02074 | overlap 1611182 TTATTGCTGAAAAAA TCGGCA AAAA TGCCAA AGTGATCCAATTAGA rbsB 1610759 - 1611631 + | ABC D-ribose transporter periplasmic-binding compoent RbsB TERM 2267 1611636 - 1611686 + F 95 -10.6 -4.43844 | opp_overlap 1611642, overlap 1611639 TAACGAAATAATCTT AAATAAGCGGTCACTTTTAGCAAA AAT TTTGCAAAATCTGACCGCTTGTTG TTTTATAGGTGGTCA TERM 2268 1611639 - 1611683 + F 93 -12.3 -4.33182 | opp_overlap 1611642, overlap 1611636 CGAAATAATCTTAAA TAAGCGGTCACTTTTAGCAAA AAT TTTGCAAAATCTGACCGCTTG TTGTTTTATAGGTGG TERM 2269 1611680 - 1611642 - f 91 -11.8 -3.98291 | opp_overlap 1611639 1611636 AATAATCTTAAATAA GCGGTCACTTTTAGCAAA AAT TTTGCAAAATCTGACCGC TTGTTGTTTTATAGG rbsK 1611704 - 1612627 + | ribokinase TERM 2270 1612896 - 1612908 + F 84 -3.3 -5.73978 | opp_overlap 1612894 1612896 ATGGTATTTTAAACA GCGTC TCA GACAC TTTTTTATTTGTAGT TERM 2271 1613521 - 1613499 - g 78 -2.7 -5.40072 | gap 1, overlap 1613500 1613503 CGTCCGCTAAAAAAA GGAGGCTACT GTGC AGTAGCG-CC AATCGACACCGCTCA glnA 1613112 - 1614374 + | glutamine synthetase TERM 2272 1614401 - 1614442 + F 84 -4.7 -5.27335 | gap 1, opp_overlap 1614403, overlap 1614403 AGGTTCAGAAAATAA AATAGTTGCTGATGAATACT TTA ATTATTC-TTAGCAACTATA TTTTTATTTAAAGAA TERM 2273 1614440 - 1614403 - f 79 -5.1 -5.18371 | gap 1, opp_overlap 1614401 1614403 GTTCAGAAAATAAAA TAGTTGCTGATGAATACT TTA ATTATTCTT-AGCAACTA TATTTTTATTTAAAG TERM 2274 1614403 - 1614440 + F 75 -7.3 -4.27026 | gap 1, opp_overlap 1614403, overlap 1614401 GTTCAGAAAATAAAA TAGTTGCTGATGAATACT TTA ATTATTC-TTAGCAACTA TATTTTTATTTAAAG TERM 2275 1615276 - 1615313 + F 71 -5.2 -4.62772 | gap 1, opp_overlap 1615283, overlap 1615281 GAACGGACAGTGACT TCTAATACAAAAAATTC AAGGA GATTTTTTTGTAT-AGA TTTCTTTAATTTACA HAPS_1636 1615430 - 1615624 + | hypothetical protein dltE 1616251 - 1615601 - | short-chain dehydrogenase/reductase SDR TERM 2276 1615980 - 1615967 - G 72 -3.1 -5.03715 | gap 1, overlap 1615956 ATCACGCTCAAAAAA GC-GAC CGT GTCCGC CAAAACCTGCATTAT TERM 2277 1616464 - 1616452 - g 70 -7.7 -3.67918 | AATTAACACGGGAAA TGCTC GCT GAGCA ACATCGCTTTGATTT HAPS_1638 1616337 - 1617197 + | transcriptional regulator, AraC family TERM 2278 1617258 - 1617200 - T 100 -17.1 -5.27023 | gap 1, opp_overlap 1617200 AGCGGAAAAATAAAA GAGCGGTGGGGTTTTCAGGAAATTTTGC AAAT ACAAAACTTA-TGAAAATCCCACCGCTC TTCTACAAGTTCTAT TERM 2279 1617200 - 1617258 + T 100 -16.4 -3.34501 | gap 1, opp_overlap 1617200 AGCGGAAAAATAAAA GAGCGGTGGGGTTTTCAGGAAATTTTG CAAATA CAAAACTTA-TGAAAATCCCACCGCTC TTCTACAAGTTCTAT pykF 1617964 - 1617521 - | pyruvate kinase HAPS_1641 1618099 - 1618989 + | LysR family transcriptional regulator TERM 2280 1619216 - 1619188 - f 70 -8.1 -3.37198 | overlap 1619186 TTTTCACACATAATA TTTGGGGCTAATC TAT GATCTGCCCCCAA AAAGTTAGACTGATT TERM 2281 1619240 - 1619272 + F 100 -11.4 -4.72729 | ACTGATTTAGTTCAA GGACTGAGTTCTGT ATTCC ACAGGGCTTAGTCC TTTTAATTTTACTTG TERM 2282 1619815 - 1619840 + F 100 -11.9 -4.4891 | opp_overlap 1619817, overlap 1619817 CCCCCACTTTCCCAA TACTTCCCCCA TAAA TGGGGGAAGAA TTTTCTCATAATGCC TERM 2283 1619838 - 1619817 - f 100 -14.5 -3.02511 | opp_overlap 1619815 1619817 CCCACTTTCCCAATA CTTCCCCCA TAAA TGGGGGAAG AATTTTCTCATAATG TERM 2284 1619817 - 1619838 + F 93 -14.5 -2.56836 | opp_overlap 1619817, overlap 1619815 CCCACTTTCCCAATA CTTCCCCCA TAAA TGGGGGAAG AATTTTCTCATAATG TERM 2285 1621656 - 1621670 + G 77 -8.6 -3.85698 | opp_overlap 1621656 1621655 1621658 CAGCTGAAAAAAAGT GAGCAA GGG TTGCTC TTTGTGCAAAAAGAG recB 1620027 - 1623614 + | exodeoxyribonuclease V, beta subunit TERM 2286 1623641 - 1623651 + T 70 -5.4 -4.37092 | opp_overlap 1623639 TATATCAATAAAGCC CACT TTG AGTG TTTTGTGGGACGAAT TERM 2287 1623742 - 1623767 + T 75 -8.9 -3.55444 | overlap 1623743 ATCCGCCCTTCGGGC ACCTTCCCCCG CAAG CGGGGGAAGAA TTTGGAAAGTGGGGG TERM 2288 1623743 - 1623766 + T 83 -12.4 -2.73124 | overlap 1623742 TCCGCCCTTCGGGCA CCTTCCCCCG CAAG CGGGGGAAGA ATTTGGAAAGTGGGG TERM 2289 1623777 - 1623803 + T 77 -8.1 -3.86015 | gap 1, opp_overlap 1623777 1623776 1623793 1623794 1623795 GAAGAATTTGGAAAG TGGGGGAGCGAA AAAA TTC-TTCCCCCA TTTATGGGGGAAGTC TERM 2290 1623818 - 1623793 - T 93 -7.5 -5.08824 | opp_overlap 1623777, overlap 1623777 1623776 1623794 1623795 GGGGGAGCGAAAAAA TTCTTCCCCCA TTTA TGGGGGAAGTC CCTGAGCGTTAGCGA TERM 2291 1623817 - 1623794 - T 88 -11 -3.64812 | opp_overlap 1623777, overlap 1623777 1623776 1623793 1623795 GGGGAGCGAAAAAAT TCTTCCCCCA TTTA TGGGGGAAGT CCCTGAGCGTTAGCG TERM 2292 1623816 - 1623795 - T 100 -14.5 -2.78405 | opp_overlap 1623777, overlap 1623777 1623776 1623794 1623793 GGGAGCGAAAAAATT CTTCCCCCA TTTA TGGGGGAAG TCCCTGAGCGTTAGC TERM 2293 1623896 - 1623875 - T 90 -3.7 -5.7946 | gap 1 CTGTGAACAAAAAAA GCGGATAGAG AGC CTCT-CCCAC AATTTGTGTAAATAC TERM 2294 1623909 - 1623944 + T 83 -7.1 -4.77165 | gap 1, opp_overlap 1623909 CACAATTTGTGTAAA TACCTGTTTCTGAGAT AATAC AT-TCAGACACAGGTA TTTTATTATGAACGA TERM 2295 1623991 - 1623964 - T 74 -4.2 -4.90869 | gap 1 ATTATGAACGAAAAA CAACTTCACGCCT TGG AAGCG-GAATTTG CCAAAAACCTAAAAA TERM 2296 1624357 - 1624380 + T 71 -8.9 -3.18274 | ATTTATGATTGATTT TGGTGATCG CTTAGA CGATCACCG TTAAGTTGAAATGGG TERM 2297 1624550 - 1624522 - T 83 -5.9 -5.13741 | opp_overlap 1624521 TTAATTGAACAAAAA GCTGACTCTGGCT CTA ACCCATTGTCAGC CCTTAATAATTAAAT aspS 1626373 - 1624601 - | aspartyl-tRNA synthetase grpE 1626553 - 1627152 + | heat shock protein (HSP-70 cofactor) HAPS_1648 1627249 - 1627551 + | hypothetical protein TERM 2298 1627594 - 1627568 - f 79 -8.1 -4.05172 | opp_overlap 1627568, overlap 1627563 TAAAGCAAAACACAA TCCCTTATTTG TTTAT CAAGTAAGGGA TTTTCACCTTAAATA TERM 2299 1627568 - 1627594 + F 90 -10.3 -4.19953 | opp_overlap 1627563 1627568 TAAAGCAAAACACAA TCCCTTATTTG TTTAT CAAGTAAGGGA TTTTCACCTTAAATA HAPS_1649 1627615 - 1628067 + | possible membrane protein TERM 2300 1629553 - 1629528 - g 71 -9.7 -2.91264 | TTGGGTAGGGACACA CTGCGTATGTC CGCG GACGCACGCAG TGCGTCCCTACAGAA TERM 2301 1630474 - 1630461 - g 73 -6.7 -4.19624 | opp_overlap 1630461 1630459 GAGTTGGAACATAAA TCTCG CCGT CGAGA TATTTTAGTGGACGA hrpA 1628082 - 1632020 + | ATP-dependent RNA helicase HrpA TERM 2302 1632128 - 1632154 + F 100 -8.1 -5.82388 | opp_overlap 1632151, overlap 1632151 TCACTCCAACTCTTA CGCCTCATT CCCCCACAA AATGAGGCG TTTTTTTTCGCCTTT TERM 2303 1632151 - 1632166 + F 73 -3.2 -5.22794 | opp_overlap 1632151, overlap 1632128 TCCCCCACAAAATGA GGCG TTTTTTTT CGCC TTTTTTCCTCGTTCT TERM 2304 1632425 - 1632435 + G 75 -5.4 -4.78572 | ATTCCAAAATTTTGG TCAC GAG GTGA TTTTCTTAATTGGCG tyrS 1632228 - 1633418 + | tyrosyl-tRNA synthetase TERM 2305 1633474 - 1633501 + T 86 -9.3 -4.31164 | opp_overlap 1633474 TTCAATTCAGCAGAA GAGCTTAGTTT AAATTC AAGCTAAGCTC TTTATGTTATATAGC alr 1634644 - 1633508 - | alanine racemase hflC 1634768 - 1635682 + | SPFH domain-containing protein HAPS_1654 1635692 - 1636132 + | regulator of membrane protease activity TERM 2306 1636149 - 1636182 + T 100 -9.7 -4.97402 | opp_overlap 1636154, overlap 1636154 AAAATTCTGACAATA AAAAACCGCTTGTTT TACA AAACAAGCGGTTTGA TTTTTCTAAATTTTA TERM 2307 1636154 - 1636177 + T 100 -14 -4.38116 | opp_overlap 1636154, overlap 1636149 TCTGACAATAAAAAA CCGCTTGTTT TACA AAACAAGCGG TTTGATTTTTCTAAA TERM 2308 1636177 - 1636154 - T 100 -14 -5.55769 | opp_overlap 1636154 1636149 TCTGACAATAAAAAA CCGCTTGTTT TACA AAACAAGCGG TTTGATTTTTCTAAA uraA 1637433 - 1636207 - | uracil permease TERM 2309 1637521 - 1637508 - R 78 -5.3 -5.05601 | opp_overlap 1637508 CATTATATAGAAAAA TGCAA ACGT TTGCA GATTTTTTTGTCAAA TERM 2310 1637619 - 1637595 - R 100 -15.1 -3.64466 | ATTGCATAGAGATAA TGTGAGCACAC AAC GTGTGCCCACA GGACGAAATTATCCA HAPS_1656 1638923 - 1637628 - | xanthine/uracil/vitamin C permease TERM 2311 1639459 - 1639435 - R 70 -2.8 -5.13648 | opp_overlap 1639454 TAAATATAAATAAAA CGACAGCAGC CTATT ACTTCTATCG TCTGCGATTGCTTAT HAPS_1659 1640411 - 1639662 - | NADP-dependent dehydrogenase HAPS_1660 1641129 - 1640467 - | carbonic anhydrase TERM 2312 1641178 - 1641156 - H 75 -5.6 -4.74611 | overlap 1641157 1641158 TAGTATAAAAAACAA CCCCCCAATT TGA AATTGGGAAA GAACAATTCTTATTC TERM 2313 1642329 - 1642300 - g 88 -11.5 -3.53761 | opp_overlap 1642280 GAACCTGTTTTTAAA GCCTTTTACACCC GATT GGTTGCAAAAGGC AAAGCGAAGAAAGTC HAPS_1661 1641487 - 1642458 + | ISNme5, family IS110 lolD 1642648 - 1643334 + | lipoprotein-releasing system ATP-binding protein lolD lolE 1643334 - 1644584 + | outer membrane-specific lipoprotein transporter subunit LolE codA 1645604 - 1644618 - | cytosine deaminase TERM 2314 1645650 - 1645638 - R 93 -4.1 -6.07627 | opp_overlap 1645638 ATGGGCAAAAAAAAA TCTCA AAA CGAGA TCTTCTAGAAATGGA TERM 2315 1645719 - 1645686 - R 100 -12.5 -5.63504 | AATGCGATAAAAAAA CAGCCAAGCTTCGTT GAAT AGCGAAGCTCAGCTG AAAAAGTGTGTTGGA HAPS_1665 1646619 - 1645846 - | dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 TERM 2316 1645911 - 1645900 - G 81 -5.8 -5.1361 | overlap 1645908 AGAAACGGCAAAAAA GCCA AAAG TGGC AGTAACCATAGTCGC ndh 1647948 - 1646665 - | NADH dehydrogenase ubiE 1648937 - 1648287 - | ubiquinone/menaquinone biosynthesis methyltransferase lpxM 1650007 - 1649057 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2317 1649110 - 1649129 + g 79 -5.8 -5.00616 | gap 1, opp_overlap 1649110 1649108 TCAAGATACGCAAGA TCCAGA-CA TAT TGCTCTGGA TTTTTTGGCACAAAG rnfE 1650706 - 1650017 - | electron transport complex protein RnfE/SoxR-reducing system protein RsxE TERM 2318 1650722 - 1650741 + r 78 -7.8 -4.19258 | overlap 1650723 ATTTTATCTCTTGTA GGGTGGGT CTTG ACCCACCA TTTTCCATAACATAT TERM 2319 1650723 - 1650740 + r 79 -11.3 -3.11073 | overlap 1650722 TTTTATCTCTTGTAG GGTGGGT CTTG ACCCACC ATTTTCCATAACATA HAPS_1670 1651438 - 1650896 - | hypothetical protein TERM 2320 1651472 - 1651453 - R 84 -7.8 -4.57073 | overlap 1651454 TACTTTTTCCAAAAA TGGTGGGT CAAG ACCCACCC TACAATTTATTACAA TERM 2321 1651471 - 1651454 - R 82 -11.3 -3.33922 | overlap 1651453 ACTTTTTCCAAAAAT GGTGGGT CAAG ACCCACC CTACAATTTATTACA rnfG 1652110 - 1651472 - | electron transport complex protein RnfG/NADH:ubiquinone oxidoreductase, subunit RnfG TERM 2322 1651715 - 1651728 + g 71 -5.2 -4.55295 | GGTTTCGATCTTATC CCCC AGCCCA GGGG TTTCTTTATGGGCAA rnfD 1653174 - 1652107 - | electron transport complex protein RnfD/NADH:ubiquinone oxidoreductase, subunit RnfD yadS 1653837 - 1653205 - | membrane protein, yadS protein TERM 2323 1653903 - 1653890 - R 70 -5.3 -4.52873 | opp_overlap 1653890, overlap 1653900 CTTTCATAAAAATAA TGTGT GTAA ACACA GTTGCTACTATGCTA rnfC 1655916 - 1653916 - | electron transport complex protein RnfC/NADH:ubiquinone oxidoreductase, subunit RnfC TERM 2324 1654373 - 1654383 + g 73 -2.4 -5.2696 | GTTTGAACTGGGGTA GCCG TTT CTGC TTTTTTCGCTTTTAA TERM 2325 1654970 - 1654959 - G 70 -5.8 -4.39318 | CAAGCAAATGCAAAA TCGG TGTG CCGA GCCTTGCCCAAACGT rnfB 1656514 - 1655906 - | electron transport complex protein RnfB/NADH:ubiquinone oxidoreductase, subunit RnfB rnfA 1657095 - 1656514 - | electron transport complex, RnfABCDGE type, A subunit/NADH:ubiquinone oxidoreductase, subunit RnfA HAPS_1677 1657131 - 1657283 + | hypothetical protein pdxY 1657751 - 1658578 + | pyridoxamine kinase TERM 2326 1658660 - 1658683 + T 70 -8.1 -3.46051 | overlap 1658661 TTTCTCGTCGGTTTT AGCGGTGGA CTTGAT TCCACCGCA TTGCTCTCTTTATTG TERM 2327 1658661 - 1658682 + T 81 -11.6 -2.66546 | overlap 1658660 TTCTCGTCGGTTTTA GCGGTGGA CTTGAT TCCACCGC ATTGCTCTCTTTATT HAPS_1681 1660400 - 1659414 - | ISCro4, family IS3 TERM 2328 1659622 - 1659634 + g 71 -4.8 -4.62069 | AGTGCCTTACGAATG TCGG ATTGC CCGA TTTTTGAAATACCAA TERM 2329 1660571 - 1660544 - H 76 -9.2 -3.29144 | opp_overlap 1660544 CTACTTTCTCTATAA CCCCATTATGAA GGTA CTCGTAATGGGG TTTTCTTTTGCCCAT TERM 2330 1660544 - 1660571 + H 100 -10.7 -5.08255 | opp_overlap 1660544 CTACTTTCTCTATAA CCCCATTATGA AGGTAC TCGTAATGGGG TTTTCTTTTGCCCAT HAPS_1682 1660663 - 1660986 + | IS222, family IS3 TERM 2331 1663713 - 1663739 + T 76 -5.8 -4.56978 | overlap 1663733 CTTCTGTGTTTAGTT GCTCCGTTGAAG CTG CTTCAGAAGAGC TTTCTTCTTTGGCGG TERM 2332 1665906 - 1665896 - T 72 -4 -4.99134 | opp_overlap 1665890 1665889 1665887, overlap 1665890 1665889 ATTGCAAAGGAAAAA GAAA CTT TTTC ATATTTGTCTCCTAA proS 1668031 - 1666316 - | prolyl-tRNA synthetase TERM 2333 1668201 - 1668191 - H 75 -5.4 -4.7373 | CGATTCGATCAAAAA TCCA CTA TGGA TAATCCCTGAGCATA acpP 1668384 - 1668614 + | acyl carrier protein TERM 2334 1668631 - 1668648 + F 100 -9.9 -5.96219 | opp_overlap 1668631 CTCCATTTAGAAAAA GCGACTT TTAC AAGTCGC TTTTTTTTCTGCCTC TERM 2335 1668648 - 1668631 - f 100 -9.9 -4.87665 | opp_overlap 1668631 CTCCATTTAGAAAAA GCGACTT TTAC AAGTCGC TTTTTTTTCTGCCTC TERM 2336 1668833 - 1668855 + G 72 -9.8 -3.06671 | overlap 1668849 1668852 AATCATTATTTGCGT TGTGCTGGCG GTG CGCCAGCGAA TGTTGCAGTCGGTGT TERM 2337 1669497 - 1669481 - g 82 -8.7 -4.17491 | AGTAAAGCCTTAAAA CCAGTAG ATA CCACTGG GGCTGGCGATGCCTT rbsK 1668761 - 1669684 + | aminoimidazole riboside kinase cutC 1670577 - 1669846 - | copper homeostasis protein galM 1671567 - 1670578 - | aldose 1-epimerase galK 1672792 - 1671638 - | galactokinase TERM 2338 1672229 - 1672246 + g 82 -6.3 -4.84359 | TAAACTACGACAGTC GATCATC ACAA GGTGATC TTTTTGTCCCAATGC TERM 2339 1672873 - 1672905 + r 70 -5.6 -4.46404 | overlap 1672868 ACTGATTTAGTTCAA GGACTGAATTCTGT ATTCC ACAGGGCTTAGTCC TTTTAATCTTACTTG TERM 2340 1673423 - 1673376 - R 73 -2.1 -5.28176 | gap 1 TTTAGCCATAAAAAA TCTGCACCTTAATTAGTTGG TTGTTTAGT CCAACTT-TTGGGGTGCAGA TCACTACACCACGCA holC 1674073 - 1673636 - | DNA polymerase III subunit chi HAPS_1695 1675966 - 1674179 - | long chain fatty acid CoA ligase TERM 2341 1675079 - 1675117 + g 77 -8.8 -3.89346 | opp_overlap 1675088, overlap 1675088 AACACGAATTGCCCA GTTGAACAAGGCTCGGCG ATG TGCCGGGGCTTTTTCCAC TTTATCCCATACCGC TERM 2342 1675088 - 1675108 + g 81 -6.7 -4.72486 | opp_overlap 1675088, overlap 1675079 TGCCCAGTTGAACAA GGCTCGGCG ATG TGCCGGGGC TTTTTCCACTTTATC TERM 2343 1676560 - 1676537 - R 71 -8.9 -3.18274 | CCCATTTCAACTTAA CGGTGATCG TCTAAG CGATCACCA AAATCAATCATAAAT TERM 2344 1676799 - 1676782 - R 84 -4.9 -5.32944 | gap 1, opp_overlap 1676782 CGGATAATCAAAAAA TGTGGCAA TAT TTGCC-CA GTTATCTTCCCAGCC TERM 2345 1677113 - 1677140 + r 74 -4.2 -4.90869 | gap 1 TTTTTAGGTTTTTGG CAAATTC-CGCTT CCA AGGCGTGAAGTTG TTTTTCGTTCATAAT TERM 2346 1677195 - 1677160 - R 83 -7.1 -4.77165 | gap 1, opp_overlap 1677160 TCGTTCATAATAAAA TACCTGTGTCTGA-AT GTATT ATCTCAGAAACAGGTA TTTACACAAATTGTG TERM 2347 1677217 - 1677232 + r 81 -9 -4.07968 | overlap 1677225 CAAATTGTGGGAGAG GCTCCT GATA AGGAGC TTTCCTTATGTATTA torD 1680835 - 1680275 - | possible anaerobic dehydrogenase TorD nfo 1680895 - 1681740 + | endonuclease IV TERM 2348 1681763 - 1681783 + F 95 -8.4 -4.77173 | opp_overlap 1681777, overlap 1681766 1681777 TGGTCTGATGTGATA GGTTTTGT GCAGA ACAAAACC TTTGTTTTATACAAA rplK 1682681 - 1683109 + | 50S ribosomal protein L11 rplA 1683114 - 1683803 + | 50S ribosomal protein L1 TERM 2349 1683858 - 1683819 - f 100 -15.3 -3.05022 | opp_overlap 1683819, overlap 1683825 TTTCTTATAGATAGA TTAAAAGCCGCTTAAAG TTCATG CTTTATGCGGCTTTTAA TTTTTGCTTACCACG TERM 2350 1683819 - 1683858 + F 100 -16 -4.8622 | opp_overlap 1683819 1683825 TTTCTTATAGATAGA TTAAAAGCCGCTTAAAGT TCAT GCTTTATGCGGCTTTTAA TTTTTGCTTACCACG TERM 2351 1683852 - 1683825 - f 91 -9.9 -4.41956 | opp_overlap 1683819, overlap 1683819 ATAGATAGATTAAAA GCCGCTTAAAG TTCATG CTTTATGCGGC TTTTAATTTTTGCTT HAPS_1708 1684900 - 1685316 + | DoxX family protein, possible membrane protein TERM 2352 1685375 - 1685317 - f 100 -15.9 -4.29953 | gap 3, opp_overlap 1685336, overlap 1685319 AAATTAGGAAAATAA TAGGGGCTGTCCTAGATAACGACTAAAA TAGAGC TTTTAGTCGTTATCTAGGACAGCCC--- CAAATTCAATCAATT TERM 2353 1685376 - 1685319 - f 100 -36.2 -3.73084 | opp_overlap 1685336, overlap 1685317 ATTAGGAAAATAATA GGGGCTGTCCTAGATAACGACTAAAA TAGAGC TTTTAGTCGTTATCTAGGACAGCCCC AAATTCAATCAATTG TERM 2354 1685336 - 1685359 + F 72 -8.3 -3.48276 | opp_overlap 1685317 1685319 GGCTGTCCTAGATAA CGACTAAAA TAGAGC TTTTAGTCG TTATCTAGGACAGCC TERM 2355 1685904 - 1685867 - f 74 -3 -5.27335 | opp_overlap 1685868 1685869, overlap 1685869 TTTTTTAAATAAAAA GAGTTGCTAA-GAATAAT TAAA AATATTCATTAGCAAC-C ATTTTGTCTACTATG TERM 2356 1685903 - 1685869 - f 73 -6.7 -4.27026 | gap 1, opp_overlap 1685869 1685868, overlap 1685867 TTTTAAATAAAAAGA GTTGCTAA-GAATAAT TAAA AATATTCATTAGCAAC CATTTTGTCTACTAT TERM 2357 1686670 - 1686659 - f 75 -7.2 -4.33105 | opp_overlap 1686659 CAAGCAGTAGCAAAA GGCG ATAC CGCC TATCTCTATACTTGG TERM 2358 1686861 - 1686886 + F 89 -7.7 -5.04325 | opp_overlap 1686862, overlap 1686862 TCATTAATTGAACGG ATGGCATAAAT GAAA ATTTATGCCAC TTTTTATACTTTAAA TERM 2359 1686885 - 1686862 - f 77 -11.2 -2.57489 | opp_overlap 1686862 1686861 CATTAATTGAACGGA TGGCATAAAT GAAA ATTTATGCCA CTTTTTATACTTTAA TERM 2360 1686862 - 1686885 + F 84 -11.2 -3.6151 | opp_overlap 1686862, overlap 1686861 CATTAATTGAACGGA TGGCATAAAT GAAA ATTTATGCCA CTTTTTATACTTTAA HAPS_1712 1686960 - 1687373 + | hypothetical protein TERM 2361 1687751 - 1687722 - T 75 -7.2 -4.29738 | overlap 1687726 GCATATTCATTAAAA CTGACATAGCAA AAATCG TTGCTATGCCTG AAATTTAGGGCTAAC hsdM 1689424 - 1687811 - | type I restriction-modification system, M subunit TERM 2362 1688803 - 1688824 + g 79 -5.1 -5.08824 | gap 1, overlap 1688805 TAGTGGAAACTTGTT GC-GGCGTAT AAA ATTCGCCTGC TTTTTTACCTGAACC TERM 2363 1691979 - 1691989 + r 78 -4 -5.36965 | TTGCTTATTTTGTTC TGAA GCA TTCA TTTTTTATACTCTTA HAPS_1717 1692786 - 1692019 - | Lj965 prophage protein HAPS_1718 1693220 - 1692783 - | possible Lj965 prophage protein TERM 2364 1693205 - 1693221 + g 71 -6.5 -4.1523 | overlap 1693207 ATAATGCATTTGCCT CTTGCTG TGC CAGCATG TTATTTATCCTTAGA TERM 2365 1693207 - 1693219 + g 70 -7.7 -3.66489 | overlap 1693205 AATGCATTTGCCTCT TGCTG TGC CAGCA TGTTATTTATCCTTA hsdR 1696201 - 1693241 - | type I site-specific deoxyribonuclease, HsdR family HAPS_1720 1696548 - 1696853 + | hypothetical protein HAPS_1721 1697772 - 1697407 - | HxlR family transcriptional regulator HAPS_1722 1697917 - 1698168 + | hypothetical protein TERM 2366 1698336 - 1698323 - T 73 -5.9 -4.36914 | GTTCCGTGTAGAAAA CGGCA AAAT CGCCG AGCATTGGGATGTGA TERM 2367 1698423 - 1698453 + T 100 -9.1 -5.45802 | opp_overlap 1698424, overlap 1698424 TTGATTGTATGAAAA ATGCCGTTTGAAA TTTCT TTTCAGACGGCAC TTTTTGTTTTGGGAC TERM 2368 1698452 - 1698424 - T 100 -10.4 -4.7373 | opp_overlap 1698423 1698424 TGATTGTATGAAAAA TGCCGTTTGAAA TTTCT TTTCAGACGGCA CTTTTTGTTTTGGGA TERM 2369 1698424 - 1698452 + T 95 -12.6 -3.86397 | opp_overlap 1698424, overlap 1698423 TGATTGTATGAAAAA TGCCGTTTGAAA TTTCT TTTCAGACGGCA CTTTTTGTTTTGGGA TERM 2370 1699773 - 1699797 + T 91 -11.5 -3.92592 | opp_overlap 1699790, overlap 1699774 1699788 1699790 CTCGAAATCCCCCTC ATTCCCCCTTT TCC AAAGGGGGAAG TTTGATATTCCCCCT TERM 2371 1699774 - 1699796 + T 100 -15 -2.95073 | opp_overlap 1699790, overlap 1699773 1699788 1699790 TCGAAATCCCCCTCA TTCCCCCTTT TCC AAAGGGGGAA GTTTGATATTCCCCC rbsB 1700793 - 1699846 - | ABC D-ribose transporter periplasmic-binding compoent RbsB rbsC 1701812 - 1700814 - | ABC D-ribose transporter permease protein RbsC rbsA 1703359 - 1701824 - | ABC D-ribose transporter ATP binding protein RbsA manA 1704801 - 1703590 - | mannose-6-phosphate isomerase TERM 2372 1703860 - 1703876 + g 71 -9.5 -2.76964 | overlap 1703858 1703856 CTCTTCACTATTATT TTCCTCA TAT TGAGGAA TAATCTTAGGTGTAA TERM 2373 1704257 - 1704220 - G 88 -11.4 -3.64259 | opp_overlap 1704228 AATGATGGGCAATAA CCATTCTGCAAGCTGA GTTTGT TCTGCTTGCATAATGG AGGCATAAACCGTTG TERM 2374 1704670 - 1704640 - G 71 -9.9 -2.82156 | overlap 1704652 1704665 1704668 ATCTAAAGGCAACCA TGCTCCTTCAA ATTCAATCA TTGAAGGAGCA GAACGGTGTGCTCCA HAPS_1729 1705256 - 1704798 - | possible membrane protein TERM 2375 1705306 - 1705279 - R 100 -12.1 -5.40474 | opp_overlap 1705276 1705279 1705281 ATGTTCTTAAAAAAA GACCGCTTGTA TTTTAG CACAAGCGGTC TAATTTATCGGATTT TERM 2376 1705279 - 1705306 + r 83 -11.4 -3.03034 | opp_overlap 1705279, overlap 1705276 1705281 ATGTTCTTAAAAAAA GACCGCTTGT ATTTTAGC ACAAGCGGTC TAATTTATCGGATTT manZ 1706166 - 1705330 - | PTS system mannose-specific protein IID manY 1706979 - 1706179 - | PTS system mannose/fructose/sorbose family IIC subunit manX 1707970 - 1706990 - | PTS system mannose-specific EIIAB component TERM 2377 1708236 - 1708200 - R 100 -9 -5.04597 | gap 1, opp_overlap 1708203 ATGGAGATATAAAAA TGTCTGTATCTTATAGT TGTC ACT-TCAGATACAGACA CAGATTGTAGTTAGG hemH 1709259 - 1708294 - | protoheme ferro-lyase recC 1712733 - 1709476 - | exodeoxyribonuclease V, gamma subunit TERM 2378 1711981 - 1711957 - G 72 -4.4 -4.68593 | gap 1, opp_overlap 1711960, overlap 1711960 TGGATTAGTGAAAAA GAGGTGAACAT TGCA ATGCTCAC-TC AATTTTTTCAATACG TERM 2379 1712050 - 1712040 - G 73 -2.4 -5.19879 | TGCCAAACATAAAAA TCCG TTT CGGT AAGCGAGCTTTTTCA TERM 2380 1712209 - 1712224 + g 83 -3.3 -5.63103 | overlap 1712191 CCACGCCACATTCGT TGCAA TCTCTT TTGCA TTTTTTTGCTTAAAA ubiF 1714007 - 1712835 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 2381 1713289 - 1713313 + g 79 -11.5 -2.5955 | overlap 1713285 GCACTCAATTTCTCT TTGCTCATCTG TTG CAGTTGAGCAA TACGTTGTGGCGAAT HAPS_1736 1714132 - 1714010 - | hypothetical protein hicA 1714220 - 1714525 + | addiction module killer protein HAPS_1738 1714532 - 1714837 + | possible transcriptional regulator hicB 1715044 - 1715403 + | HicB-like protein TERM 2382 1715628 - 1715616 - g 72 -3.3 -5.0133 | GATTGCCCGAAAAAA GCGTC AAA GAAGC ACAAGATAGGGTGCG comM 1715495 - 1717027 + | competence protein M holB 1718013 - 1717024 - | DNA polymerase III subunit delta TERM 2383 1718117 - 1718139 + r 77 -10.6 -2.84602 | overlap 1718116 GCCAAATCTCCCCTA ACCCCTCTTT GCT AAAGAGGGGA ATTTACTCAGATAAA tdk 1719010 - 1718384 - | thymidylate kinase TERM 2384 1718447 - 1718459 + g 70 -9.1 -3.14211 | CGACACCTGTTCTAT CGCTG GTT CAGCG TTAATGAGCACCGCT fbp 1720044 - 1719010 - | periplasmic solute-binding protein TERM 2385 1719861 - 1719885 + g 93 -10.7 -4.76892 | CACGATGAATAATGC CTTGCTCTGCT AAT AGCTGAGCGAG TTTTTGACTTGATGT TERM 2386 1720580 - 1720524 - R 89 -11.1 -4.12296 | opp_overlap 1720528 1720530 1720533, overlap 1720530 1720533 1720568 TTTACAAGCAAATAA TATCAACAAGCGGTGAGATTCTGTAAA AAT TTTACCAAATCTAACCGCTTGTCTTTA AGCGAAAAAATTACG TERM 2387 1720528 - 1720576 + r 90 -11.9 -3.53091 | opp_overlap 1720524 1720530 1720533 1720568, overlap 1720530 1720533 CAAGCAAATAATATC AACAAGCGGTGAGATTCTGTAAA AAT TTTACCAAATCTAACCGCTTGTC TTTAAGCGAAAAAAT TERM 2388 1720574 - 1720530 - R 100 -16.7 -3.51158 | opp_overlap 1720528 1720530 1720533, overlap 1720524 1720533 1720568 AGCAAATAATATCAA CAAGCGGTGAGATTCTGTAAA AAT TTTACCAAATCTAACCGCTTG TCTTTAAGCGAAAAA TERM 2389 1720530 - 1720574 + r 100 -14.5 -3.34398 | opp_overlap 1720530 1720524 1720533 1720568, overlap 1720528 1720533 AGCAAATAATATCAA CAAGCGGTGAGATTCTGTAAA AAT TTTACCAAATCTAACCGCTTG TCTTTAAGCGAAAAA TERM 2390 1720533 - 1720571 + r 86 -10.4 -3.81488 | opp_overlap 1720530 1720524 1720533 1720568, overlap 1720530 1720528 AAATAATATCAACAA GCGGTGAGATTCTGTAAA AAT TTTACCAAATCTAACCGC TTGTCTTTAAGCGAA TERM 2391 1720571 - 1720533 - R 95 -12.6 -3.86781 | opp_overlap 1720533 1720530 1720528, overlap 1720530 1720524 1720568 AAATAATATCAACAA GCGGTGAGATTCTGTAAA AAT TTTACCAAATCTAACCGC TTGTCTTTAAGCGAA tpiA 1721382 - 1720591 - | triosephosphate isomerase TERM 2392 1721522 - 1721537 + H 83 -6.1 -5.21709 | opp_overlap 1721522 ATTAAGTAACGATAA GGCAC TTTCTC GTGCC TTTTTTAATATGAGC TERM 2393 1721784 - 1721758 - H 76 -8 -4.14945 | overlap 1721759 CGAAGAATAACTAAA CTTTCCCCCTTT GAA AAAGGGGGGAAT TAAAACTATAAGGAA TERM 2394 1721783 - 1721759 - H 83 -11.5 -3.07882 | overlap 1721758 GAAGAATAACTAAAC TTTCCCCCTTT GAA AAAGGGGGGAA TTAAAACTATAAGGA surE 1721810 - 1722574 + | acid phosphatase stationary/phase survival protein apoB 1722575 - 1723159 + | SNARE associated Golgi protein, membrane lipoprotein B HAPS_1751 1723169 - 1723678 + | lipoprotein TERM 2395 1723704 - 1723720 + F 70 -8.7 -3.0976 | opp_overlap 1723704 1723706, overlap 1723706 AATGACATTTGAATA GACGCAG AGG TTGCGTC TATTACGATATTGAG TERM 2396 1723767 - 1723778 + F 83 -7.2 -4.81644 | TTAGACTTTTTTGAA CGCC CTTT GGCG TTTTCATTTTCTTTG lppB 1723806 - 1724981 + | outer membrane antigenic lipoprotein B precursor TERM 2397 1725005 - 1725057 + T 100 -15.3 -2.62735 | opp_overlap 1725005 1725007 1725012, overlap 1725007 1725012 ATTTGAGGCATAGTA GACAAAAGTGTTGGTTTTAATTA TTTTCCC TAATTATTACCAACACTTTTGTC TACTATGCAAAATAT TERM 2398 1725057 - 1725005 - T 100 -15.3 -2.64735 | opp_overlap 1725005 1725007 1725012, overlap 1725007 1725012 ATTTGAGGCATAGTA GACAAAAGTGTTGGTTTTAATTA TTTTCCC TAATTATTACCAACACTTTTGTC TACTATGCAAAATAT TERM 2399 1725055 - 1725007 - T 84 -12.1 -2.8655 | opp_overlap 1725007 1725005 1725012, overlap 1725005 1725012 TTGAGGCATAGTAGA CAAAAGTGTTGGTTTTAATTA TTTTCCC TAATTATTACCAACACTTTTG TCTACTATGCAAAAT TERM 2400 1725007 - 1725055 + T 84 -12.1 -2.8547 | opp_overlap 1725005 1725007 1725012, overlap 1725005 1725012 TTGAGGCATAGTAGA CAAAAGTGTTGGTTTTAATTA TTTTCCC TAATTATTACCAACACTTTTG TCTACTATGCAAAAT TERM 2401 1725012 - 1725050 + T 76 -6.2 -4.5954 | opp_overlap 1725007 1725005 1725012, overlap 1725007 1725005 GCATAGTAGACAAAA GTGTTGGTTTTAATTA TTTTCCC TAATTATTACCAACAC TTTTGTCTACTATGC TERM 2402 1725050 - 1725012 - T 76 -6.2 -4.5954 | opp_overlap 1725012 1725007 1725005, overlap 1725007 1725005 GCATAGTAGACAAAA GTGTTGGTTTTAATTA TTTTCCC TAATTATTACCAACAC TTTTGTCTACTATGC TERM 2403 1725409 - 1725388 - T 100 -15.9 -3.13164 | TTGTCAAGGAGTTAA CTTCCCCCG CTTG CGGGGGAAG TGCCCGAGCGAAAGC TERM 2404 1727550 - 1727533 - T 72 -7.7 -3.74347 | gap 1 GTCAGAAAGGTGAAA CTGG-CCC TGT GGGTCCAG TAGGTCCAGCTGGAC TERM 2405 1727673 - 1727643 - T 78 -11 -2.71144 | overlap 1727651 GACCGTGGTGAAGCA GGACCAGAGGGCCC TCA AGGCCCTGCGGGCC CAGCAGGTCCAAAAG TERM 2406 1727674 - 1727651 - T 75 -10.2 -2.84687 | overlap 1727643 TGAAGCAGGACCAGA GGGCCCTCAA GGCC CTGCGGGCCC AGCAGGTCCAAAAGG TERM 2407 1727745 - 1727715 - T 70 -8.3 -3.45023 | gap 1, overlap 1727688 1727742 1727744 CCAGCAGGACCACAA GGCCCTGCGGGTCC AACG GGACC-ACAAGACC CTACGGGTCCAACGG TERM 2408 1727754 - 1727742 - T 73 -9.1 -3.42574 | overlap 1727715 1727744 CCAACGGGACCACAA GACCC TAC GGGTC CAACGGGACCACAAG TERM 2409 1727808 - 1727796 - T 73 -9.1 -3.42574 | CCAACGGGATCACAA GACCC TGC GGGTC CAACTGGAAATTCGG TERM 2410 1728594 - 1728624 + T 100 -18.6 -3.62096 | overlap 1728594 1728597 TTAGAATTTCATGCT CAATGCCATTGTTA TTT TAACAATGGCATTG TTTGGCATAGTAGAC TERM 2411 1728597 - 1728621 + T 100 -14.5 -3.94634 | overlap 1728594 1728594 GAATTTCATGCTCAA TGCCATTGTTA TTT TAACAATGGCA TTGTTTGGCATAGTA TERM 2412 1728700 - 1728735 + T 76 -3.4 -5.31877 | opp_overlap 1728700, overlap 1728703 CACAATTTGTGTAAA TACCTGTTTCTAAA ATAGTACA TTCAGACACAGGTA TTTTTTATAATGAAT TERM 2413 1728886 - 1728905 + T 78 -6.4 -4.70583 | opp_overlap 1728880, overlap 1728888 GCTATAAGAGACTTT AAGCCACT TTTT AGTGGCTA TTTTATATTACTCCC TERM 2414 1728888 - 1728903 + T 80 -9 -3.9638 | opp_overlap 1728880, overlap 1728886 TATAAGAGACTTTAA GCCACT TTTT AGTGGC TATTTTATATTACTC rraA 1729452 - 1728952 - | ribonuclease activity regulator protein RraA TERM 2415 1729320 - 1729332 + g 74 -6.3 -4.37502 | opp_overlap 1729319, overlap 1729307 CTGCAATTAAGCCAT TGCTT TCA AAGCA TTTTACTGTGGTGAT pqiA 1730766 - 1729516 - | paraquat-inducible protein A, PqiA TERM 2416 1730060 - 1730076 + g 80 -4.3 -5.24531 | TTGCTTTCACAACGT GGGCAAC GAT GTCGTCC TTTTTTATCCACGAT TERM 2417 1730311 - 1730299 - G 74 -9.1 -3.61178 | TTCACGCACTTTAAA TGCCG CCA CGGCA ATCGCCACGAGATAA rnhB 1731350 - 1730763 - | ribonuclease HII TERM 2418 1731274 - 1731260 - G 73 -8.6 -3.75738 | overlap 1731263 GATTAGGATCAAGAA TAACGG CAG CCGTTA CCACCGCTCCAACCA HAPS_1757 1732244 - 1731354 - | possible GCV family glycine cleavage complex aminomethyltransferase TERM 2419 1732481 - 1732493 + r 77 -2.6 -5.47159 | CCACCAAGCCGAATG TGGC GAACA GCCG TTTTTTATGTTGCAA HAPS_1759 1732978 - 1732586 - | MarR family transcriptional regulator TERM 2420 1733167 - 1733192 + H 75 -5.5 -4.8543 | overlap 1733169 1733191 AAAATGTTATTTATA TTCACTTTTTC ATTG GAAAAAGTGTG TTTTTATCAAGATTC TERM 2421 1733169 - 1733190 + H 89 -10.3 -4.04397 | overlap 1733167 AATGTTATTTATATT CACTTTTTC ATTG GAAAAAGTG TGTTTTTATCAAGAT TERM 2422 1734304 - 1734294 - g 73 -5.4 -4.58773 | GTGATGAAATTAAAA CTGA TGG TCAG AAAATTTACGAAGCA bcgIA 1733606 - 1735519 + | restriction enzyme, alpha subunit/N-6 DNA methylase TERM 2423 1735836 - 1735805 - g 86 -10.4 -4.09685 | opp_overlap 1735807, overlap 1735807 1735823 TTGGACTGGGCAAAA CATTCAAGTTTTGA AAAA TCAAAACTTGAATT ATTGGGTAGCTATGT TERM 2424 1735834 - 1735807 - g 95 -13 -3.64716 | opp_overlap 1735807, overlap 1735805 1735823 GGACTGGGCAAAACA TTCAAGTTTTGA AAAA TCAAAACTTGAA TTATTGGGTAGCTAT TERM 2425 1735807 - 1735834 + G 95 -13 -3.68836 | opp_overlap 1735807 1735805 1735823 GGACTGGGCAAAACA TTCAAGTTTTGA AAAA TCAAAACTTGAA TTATTGGGTAGCTAT bcgIB 1735512 - 1736648 + | restriction enzyme, beta subunit/N-6 DNA methylase TERM 2426 1737033 - 1737022 - f 76 -4.4 -5.15634 | GAGCGGATGAAAAAA CAGA AAAT TCTG TTACCAGTTAATACA TERM 2427 1737157 - 1737189 + F 100 -10 -5.42131 | opp_overlap 1737159 1737160, overlap 1737160 TAATAAATATATGAA AAGGTCGTCTGAAA TAAAT TTTCAGACGACTTA TTTTTTGTATACTTA TERM 2428 1737187 - 1737159 - f 95 -10.4 -4.47397 | opp_overlap 1737157 1737160, overlap 1737160 ATAAATATATGAAAA GGTCGTCTGAAA TAAAT TTTCAGACGACT TATTTTTTGTATACT TERM 2429 1737160 - 1737186 + F 100 -13.9 -4.77122 | opp_overlap 1737160 1737159, overlap 1737157 TAAATATATGAAAAG GTCGTCTGAAA TAAAT TTTCAGACGAC TTATTTTTTGTATAC TERM 2430 1737186 - 1737160 - f 100 -13.9 -3.26811 | opp_overlap 1737157 1737160, overlap 1737159 TAAATATATGAAAAG GTCGTCTGAAA TAAAT TTTCAGACGAC TTATTTTTTGTATAC TERM 2431 1737474 - 1737444 - g 89 -9.8 -4.14739 | overlap 1737445 1737448 1737471 TGAGTTATCGGAAAA TTCAGTTACTCGAA AAT TTCGAGTAACTGCC GATGACGGTAAAAAT TERM 2432 1737473 - 1737445 - g 91 -13.3 -3.08522 | overlap 1737444 1737448 1737471 GAGTTATCGGAAAAT TCAGTTACTCGAA AAT TTCGAGTAACTGC CGATGACGGTAAAAA TERM 2433 1737470 - 1737448 - g 91 -13.6 -2.75577 | overlap 1737445 1737444 TTATCGGAAAATTCA GTTACTCGAA AAT TTCGAGTAAC TGCCGATGACGGTAA hemL 1737241 - 1738245 + | glutamate-1-semialdehyde 2,1-aminomutase TERM 2434 1738460 - 1738417 - T 80 -9.8 -3.56576 | gap 1, opp_overlap 1738429, overlap 1738410 1738422 1738424 AAATGCAATAACTAA GT-TAATATGTAATGCCTCCA ATA TGGGGGCATTACATCTCAGAC CGCTGACAAACTATA TERM 2435 1738454 - 1738422 - T 87 -12.1 -3.26428 | opp_overlap 1738429, overlap 1738417 1738424 CAATAACTAAGTTAA TATGTAATGCCTCCA ATA TGGGGGCATTACATC TCAGACCGCTGACAA TERM 2436 1738452 - 1738424 - T 100 -14.7 -3.18536 | opp_overlap 1738429, overlap 1738422 1738417 ATAACTAAGTTAATA TGTAATGCCTCCA ATA TGGGGGCATTACA TCTCAGACCGCTGAC TERM 2437 1738429 - 1738447 + T 80 -11 -3.12351 | opp_overlap 1738424 1738422 1738417 TAAGTTAATATGTAA TGCCTCCA ATA TGGGGGCA TTACATCTCAGACCG hemL 1739955 - 1738672 - | glutamate-1-semialdehyde aminotransferase wecA 1740101 - 1741165 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase TERM 2438 1741207 - 1741219 + G 73 -2 -5.18561 | opp_overlap 1741203, overlap 1741203 GAAAACACAACGTTC TAGT GTAGG ACTA TTTTTTACATCTTTA HAPS_1767 1741178 - 1741429 + | hypothetical protein TERM 2439 1742496 - 1742484 - g 80 -7.7 -4.35663 | AACAATACCAACAAA TGAGC CAT GCTCA AAACCCATACGGTGA wecB 1741484 - 1742584 + | UDP-N-acetylglucosamine 2-epimerase wecC 1742571 - 1743815 + | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 2440 1744533 - 1744553 + G 93 -9.7 -4.78764 | opp_overlap 1744532 1744533 ATCGGCAGTAAACAG CGTCCGAAT AGC GTTCGGGCG TTTTTGCTCAGTTTA TERM 2441 1745108 - 1745123 + G 70 -3.2 -4.84274 | GCCACTGCTGTGGTC GGCTCT GGCG ATAGCC TTTTTACTCTGGTTA dsbD 1743906 - 1745627 + | thiol:disulfide interchange protein DsbD precursor HAPS_1771 1745603 - 1746445 + | dehydrogenases with different specificities HAPS_1772 1746784 - 1747707 + | ISApl1, family IS30 TERM 2442 1747770 - 1747733 - T 84 -7.9 -4.64766 | gap 1, opp_overlap 1747735 1747736, overlap 1747734 1747735 TTCATATTTCAAAAA GTGGGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGC-CAT TTTTACCAACACTTT TERM 2443 1747769 - 1747734 - T 85 -11.4 -3.38378 | gap 1, opp_overlap 1747735 1747736, overlap 1747733 1747735 TCATATTTCAAAAAG TGGGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGC-CA TTTTTACCAACACTT TERM 2444 1747769 - 1747735 - T 85 -13 -2.62545 | opp_overlap 1747735 1747736, overlap 1747734 1747733 CATATTTCAAAAAGT GGGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCCA TTTTTACCAACACTT TERM 2445 1747735 - 1747769 + T 100 -15.2 -4.57341 | opp_overlap 1747734 1747735 1747733, overlap 1747736 CATATTTCAAAAAGT GGGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCCA TTTTTACCAACACTT TERM 2446 1747736 - 1747768 + T 100 -18.7 -3.33922 | opp_overlap 1747734 1747735 1747733, overlap 1747735 ATATTTCAAAAAGTG GGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCC ATTTTTACCAACACT trmE 1749162 - 1747804 - | tRNA modification GTPase TrmE HAPS_1774 1749394 - 1749579 + | hypothetical protein HAPS_1776 1751396 - 1750920 - | integral membrane protein aroQ 1751896 - 1751492 - | 3-dehydroquinate dehydratase TERM 2447 1751802 - 1751821 + g 76 -7.2 -4.22475 | gap 1, opp_overlap 1751801 1751802, overlap 1751797 TGAAAATAGTCAAAC GCA-AAGCC TTG GGCTTCTGC TTGTTGTTTTAAATG TERM 2448 1752210 - 1752187 - R 100 -8.3 -5.09895 | GATGGATGTAAAAAA GGCAATATA TTTGAC TATATTGCC ATTAAAGATAATAAC ulaD 1752910 - 1752230 - | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 2449 1752705 - 1752717 + g 81 -6.9 -4.66609 | overlap 1752703 TTGGCAAGGATTGCA CCGCC ATC GGTGG TTTTTAGGTCACATA TERM 2450 1753007 - 1753026 + r 100 -13.6 -3.73816 | opp_overlap 1753001 1752999 1752996 AAAACAACATTGTAG GGACGCCA CGCT TGGCGTCC TTTAAATATCATCTT TERM 2451 1753079 - 1753058 - R 80 -10.1 -3.56821 | opp_overlap 1753055 1753058, overlap 1753059 ACTATATTTGGGAAA TGGACGCCA AGCG TGGCGTCCC TACATTTCTCTTGTG TERM 2452 1753058 - 1753079 + r 75 -10.1 -2.77298 | opp_overlap 1753058 1753059, overlap 1753055 ACTATATTTGGGAAA TGGACGCCA AGCG TGGCGTCCC TACATTTCTCTTGTG TERM 2453 1753078 - 1753059 - R 93 -13.6 -2.73771 | opp_overlap 1753058 1753055, overlap 1753058 CTATATTTGGGAAAT GGACGCCA AGCG TGGCGTCC CTACATTTCTCTTGT ulaC 1753612 - 1753142 - | ascorbate-specific phosphotransferase protein IIA component, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) TERM 2454 1753655 - 1753632 - R 89 -11 -3.86015 | opp_overlap 1753622 1753633, overlap 1753633 CACCTCTTGGATAAA TTCCCCCCTT TGAA AAGGGGGGAT TGACTAGGTTACTTA TERM 2455 1753654 - 1753633 - R 100 -14.5 -2.91395 | opp_overlap 1753622 1753633, overlap 1753632 ACCTCTTGGATAAAT TCCCCCCTT TGAA AAGGGGGGA TTGACTAGGTTACTT TERM 2456 1753633 - 1753654 + r 100 -14.5 -3.10677 | opp_overlap 1753633 1753632, overlap 1753622 ACCTCTTGGATAAAT TCCCCCCTT TGAA AAGGGGGGA TTGACTAGGTTACTT ulaA 1755460 - 1753664 - | ascorbate-specific PTS system enzyme IIC/IIB TERM 2457 1753974 - 1753990 + g 80 -4.3 -5.25772 | overlap 1753965 1753962 TTTGCATCACTTTGA GCAGGTG ATA CTTCTGC TTTTTCTTCTACTTT TERM 2458 1755460 - 1755474 + g 73 -7.2 -3.96932 | CTGTGAGCATTTCCA TAAGAG TAC CTCTTA TTTATCAATATGTAT TERM 2459 1755513 - 1755499 - H 71 -4.2 -4.88067 | overlap 1755501 ATGTATGGAGAAAAA TTGCTC TCA GCGCAA TGCTGAGTGTCGAAA TERM 2460 1755760 - 1755734 - H 74 -9.4 -3.01712 | TGCTCTCTCCGAATA TTCCCCCCCCTT TGA AAAAGGGGGGAT AGGGGAGATTTAAAA TERM 2461 1755864 - 1755884 + G 77 -8.3 -3.91072 | GACAGACTGTCTATC GCCAAAACC TGT GGTTTTGAC TTTGTGGAAATTTCC sgbU 1755789 - 1756649 + | putative L-xylulose 5-phosphate 3-epimerase sgbE 1756643 - 1757335 + | L-ribulose-5-phosphate 4-epimerase TERM 2462 1757407 - 1757371 - T 100 -17.5 -4.56775 | opp_overlap 1757371 ATTTGTTGCTAAAAA GAGGCTTAACGCCTTAT AGT ACAAGGCTTTAAGCCTC TTTTTGAAACATGAA TERM 2463 1757371 - 1757407 + T 100 -15.3 -4.58395 | opp_overlap 1757371 ATTTGTTGCTAAAAA GAGGCTTAACGCCTTAT AGT ACAAGGCTTTAAGCCTC TTTTTGAAACATGAA HAPS_1784 1758987 - 1758286 - | hypothetical protein TERM 2464 1758900 - 1758935 + g 82 -7.7 -4.57341 | opp_overlap 1758900 CATAATTCAAAAAAA GTGGCTTAAAGCC CGTAATATAA GACTTTAAGCCAC TTTTTAGCAACCATT TERM 2465 1758935 - 1758900 - G 100 -11.4 -5.55698 | gap 1, opp_overlap 1758900 CATAATTCAAAAAAA GTGGCTTAAAGCCCGTA ATA TA-AGACTTTAAGCCAC TTTTTAGCAACCATT TERM 2466 1758952 - 1758966 + g 74 -5 -4.70659 | TTTTAGCAACCATTT TGGTAT ACT ATGCCA TTTTTCCCTCTCGAG HAPS_1785 1759590 - 1759030 - | decarboxylase family protein, predicted Rossmann fold nucleotide-binding protein mazG 1759654 - 1759974 + | nucleotide pyrophosphohydrolase TERM 2467 1760019 - 1759976 - T 100 -18.4 -4.15222 | opp_overlap 1759979 1759988, overlap 1759979 ATCGTGGGGAATAAA CAAGCGGTGAGATTTGCAAA AAAT TTTGCAGATTTCACCGCTTG TCACATCAATAACTA TERM 2468 1760016 - 1759979 - T 100 -14.3 -4.20367 | opp_overlap 1759979 1759988, overlap 1759976 GTGGGGAATAAACAA GCGGTGAGATTTGCAAA AAAT TTTGCAGATTTCACCGC TTGTCACATCAATAA TERM 2469 1759979 - 1760016 + T 100 -18.7 -3.33492 | opp_overlap 1759979 1759976, overlap 1759988 GTGGGGAATAAACAA GCGGTGAGATTTGCAAA AAAT TTTGCAGATTTCACCGC TTGTCACATCAATAA gntP 1761381 - 1760032 - | gluconate permease gntK 1761579 - 1762094 + | gluconate kinase gntR 1763029 - 1762091 - | HTH-type transcriptional regulator TERM 2470 1762230 - 1762253 + g 81 -11.8 -2.64616 | ATAACCGTTGCTAAT TGTGGGGTAA GCGA TTGCCCCACA TCATGTCCATGAAAG TERM 2471 1763226 - 1763169 - R 100 -21.2 -3.71378 | gap 2, opp_overlap 1763169 1763171 1763177 1763180, overlap 1763173 1763176 1763180 GAGAGGCAATAAATA GAAATGATCAAGCGGTGAGATTTGCAAA AAAT TTTGCAAATCTCACCGCTTG-T-ATTCC TTATTTCTCTGAAGA TERM 2472 1763169 - 1763226 + r 100 -19 -4.14627 | gap 2, opp_overlap 1763169 1763173 1763176 1763180, overlap 1763171 1763177 1763180 GAGAGGCAATAAATA GAAATGATCAAGCGGTGAGATTTGCAAA AAAT TTTGCAAATCTCACCGCTTG-T-ATTCC TTATTTCTCTGAAGA TERM 2473 1763171 - 1763229 + r 95 -13 -4.03234 | gap 3, opp_overlap 1763169 1763173 1763176 1763180, overlap 1763169 1763177 1763180 GAGGCAATAAATAGA -AATG-AT-CAAGCGGTGAGATTTGCAAA AAAT TTTGCAAATCTCACCGCTTGTATTCCTTA TTTCTCTGAAGAGAA TERM 2474 1763222 - 1763173 - R 100 -18.4 -4.46072 | gap 2, opp_overlap 1763169 1763171 1763177 1763180, overlap 1763169 1763176 1763180 GGCAATAAATAGAAA TGATCAAGCGGTGAGATTTGCAAA AAAT TTTGCAAATCTCACCGCTTG-T-A TTCCTTATTTCTCTG TERM 2475 1763221 - 1763176 - R 100 -25.1 -3.17739 | opp_overlap 1763169 1763171 1763177 1763180, overlap 1763173 1763169 1763180 AATAAATAGAAATGA TCAAGCGGTGAGATTTGCAAA AAAT TTTGCAAATCTCACCGCTTGT ATTCCTTATTTCTCT TERM 2476 1763177 - 1763220 + r 100 -28.6 -3.39742 | opp_overlap 1763176 1763173 1763169 1763180, overlap 1763169 1763171 1763180 ATAAATAGAAATGAT CAAGCGGTGAGATTTGCAAA AAAT TTTGCAAATCTCACCGCTTG TATTCCTTATTTCTC TERM 2477 1763180 - 1763217 + r 100 -24.5 -3.80745 | opp_overlap 1763180 1763176 1763173 1763169, overlap 1763177 1763169 1763171 AATAGAAATGATCAA GCGGTGAGATTTGCAAA AAAT TTTGCAAATCTCACCGC TTGTATTCCTTATTT TERM 2478 1763217 - 1763180 - R 100 -24.5 -3.37141 | opp_overlap 1763177 1763169 1763171 1763180, overlap 1763176 1763173 1763169 AATAGAAATGATCAA GCGGTGAGATTTGCAAA AAAT TTTGCAAATCTCACCGC TTGTATTCCTTATTT napC 1763817 - 1763227 - | nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit napB 1764245 - 1763817 - | diheme cytochrome c550/periplasmic nitrate reductase, small subunit, cytochrome C550, in complex with NapA TERM 2479 1764259 - 1764273 + r 73 -8.6 -3.31461 | ATTTTTCACTCCGTT CACGTT CAA AACGTG TTGTAAAACTAAATA napH 1765111 - 1764242 - | quinol dehydrogenase membrane component, NapH/MauN family ferredoxin-type protein napG 1765800 - 1765111 - | quinol dehydrogenase periplasmic component TERM 2480 1765746 - 1765771 + g 72 -4.7 -4.77567 | gap 1, overlap 1765750 CTGGTGGACGCAGTG CC-ACGCCTTGT CGA GCAAGGCTTTGG TTTTGTTGTAAGGCT TERM 2481 1765750 - 1765766 + g 85 -8.7 -4.35361 | overlap 1765746 TGGACGCAGTGCCAC GCCTTGT CGA GCAAGGC TTTGGTTTTGTTGTA TERM 2482 1765821 - 1765831 + r 82 -6.8 -5.055 | opp_overlap 1765809 AAACACCGCCTGCCG TGCG TGT CGCA TTTTTTAAAAATTGG TERM 2483 1765929 - 1765954 + r 84 -9.7 -3.67775 | overlap 1765931 ACGGGGTATCTGATA TTCTTCCCCCA TTTA TGGGGGAAGTG TTCTTGGCTAAGCCT TERM 2484 1765931 - 1765952 + r 100 -14.5 -3.41988 | overlap 1765929 GGGGTATCTGATATT CTTCCCCCA TTTA TGGGGGAAG TGTTCTTGGCTAAGC napA 1768445 - 1765962 - | nitrate reductase/anaerobic dehydrogenase, typically selenocysteine-containing TERM 2485 1768383 - 1768410 + g 73 -7.6 -4.10552 | overlap 1768387 AGGTAACGTAATACC TGCGGCGAGAGC TGCT GCTGCCGCTGCA TTTGCTTTCATAAAA napD 1768762 - 1768478 - | periplasmic nitrate reductase subunit NapD napF 1769234 - 1768764 - | ferredoxin-type protein NapF TERM 2486 1769459 - 1769432 - g 100 -11.4 -5.57396 | opp_overlap 1769430 1769432 ATAATCAATAAAAAA GCGGTAAAAATG ATTT CATTCTCACCGC TATATATTTAATTTT HAPS_1797 1769330 - 1769470 + | hypothetical protein rpmJ1 1769613 - 1769488 - | 50S ribosomal protein L36 rpmE2 1769898 - 1769632 - | 50S ribosomal protein L31 type B TERM 2487 1770707 - 1770721 + G 71 -6.4 -4.18018 | GGGCAGATATGTTCG TTGCAG GCT CTGCGA TTTTCGATCAACCAG rpe 1770112 - 1770786 + | ribulose-phosphate 3-epimerase HAPS_1801 1772309 - 1770861 - | arylsulfatase A TERM 2488 1772331 - 1772359 + r 95 -10.3 -4.50993 | opp_overlap 1772343, overlap 1772332 ATTCCATTATTTTAG GGTAGGGACACAC TGC GTGTGTCCGTACA TTTGTCTTTCTTTGG TERM 2489 1772332 - 1772358 + r 100 -13.8 -3.28969 | opp_overlap 1772343, overlap 1772331 TTCCATTATTTTAGG GTAGGGACACAC TGC GTGTGTCCGTAC ATTTGTCTTTCTTTG yidK 1774094 - 1772403 - | SSS family solute:sodium (Na+) symporter HAPS_1803 1774347 - 1775153 + | permease TERM 2490 1775379 - 1775363 - g 70 -9.4 -2.57013 | opp_overlap 1775361 1775360, overlap 1775359 TTGTAATGTAAGCCA GCCCAC ACTGA GTGGGC AGATTCGTAAGTTAG oxyR 1775277 - 1776167 + | DNA-binding transcriptional regulator OxyR, hydrogen peroxide-inducible genes activator fabR 1776167 - 1776784 + | DNA-binding transcriptional repressor FabR TERM 2491 1776807 - 1776787 - g 70 -2.5 -5.09762 | TGGTAAGAAATAAAA TGAAAAAGC ATG GCATTATCA ACTGTTCTATGAAAA HAPS_1806 1776786 - 1777301 + | thioredoxin-like protein TERM 2492 1777327 - 1777305 - T 100 -10.6 -4.96848 | opp_overlap 1777305 1777308 TGGGTGAGATAAAAA CAAGCGGTCA GAT TGAACGCTTG TTTTGCAAATACACT TERM 2493 1777305 - 1777327 + T 89 -10.6 -4.11394 | opp_overlap 1777305, overlap 1777308 TGGGTGAGATAAAAA CAAGCGGTCA GAT TGAACGCTTG TTTTGCAAATACACT TERM 2494 1777308 - 1777324 + T 73 -6.5 -4.18506 | opp_overlap 1777305, overlap 1777305 GTGAGATAAAAACAA GCGGTCA GAT TGAACGC TTGTTTTGCAAATAC dsbA 1777912 - 1777343 - | Thiol:disulfide interchange protein dsbA precursor TERM 2495 1777473 - 1777457 - G 75 -3 -5.28176 | gap 1, opp_overlap 1777457 TTCATTCACAAAAAA TGC-TGG CACG CCACGCA CTTTAAATTCTTCAG HAPS_1808 1778289 - 1778020 - | hypothetical protein mobAB 1778374 - 1779486 + | molybdopterin-guanine dinucleotide biosynthesis protein TERM 2496 1779544 - 1779521 - T 73 -6.8 -4.34345 | opp_overlap 1779525, overlap 1779522 GACATAGTAGGAAAA TTTATGTAGC AACT GCTACATAAT ATCGATAGTACAAGG TERM 2497 1779543 - 1779522 - T 79 -10.3 -3.19884 | opp_overlap 1779525, overlap 1779521 ACATAGTAGGAAAAT TTATGTAGC AACT GCTACATAA TATCGATAGTACAAG TERM 2498 1780008 - 1779974 - T 100 -9.6 -5.95539 | opp_overlap 1779972 1779974 TTTTAAATAAAAAAA GTTGCTAATATTTA AAGAAAA TAAACATTAGCAAC TATTTCGTCTACTAT iclR 1780943 - 1780155 - | transcriptional regulator IclR TERM 2499 1781299 - 1781310 + G 70 -5.8 -4.43571 | GGGTGTTTATTCTCA CGGT GTAA ACCG TTTTCCTCGTTTTAT HAPS_1811 1781168 - 1781536 + | malate/L-lactate dehydrogenase TERM 2500 1782079 - 1782103 + F 100 -13.7 -3.78775 | AATACACCTTCTCTA TCCCCCTTTTT CCC AAAAGGGGGGA TTTGCTAATACAGAA sgbK 1782135 - 1783586 + | L-xylulose kinase TERM 2501 1783591 - 1783643 + T 75 -9.9 -2.75844 | opp_overlap 1783591, overlap 1783590 1783594 CATTACACTAGATAA GTTCAAGCGGTAAGATTTATTGCAA ATT TAGCAACTGCTCTTACCGCTTGTAC ATTTCCAATCCCAAG TERM 2502 1783643 - 1783591 - T 80 -9.9 -3.58365 | opp_overlap 1783591 1783590 1783594 CATTACACTAGATAA GTTCAAGCGGTAAGATTTATTGCAA ATT TAGCAACTGCTCTTACCGCTTGTAC ATTTCCAATCCCAAG TERM 2503 1783594 - 1783640 + T 74 -10.2 -2.65354 | opp_overlap 1783591, overlap 1783591 1783590 TACACTAGATAAGTT CAAGCGGTAAGATTTATTGCAA ATT TAGCAACTGCTCTTACCGCTTG TACATTTCCAATCCC nusG 1784781 - 1784248 - | transcription antitermination protein NusG TERM 2504 1784692 - 1784706 + g 71 -7.2 -3.86202 | CTCACCAAATTGGTC TTGCAT ATT ATGCAA TTTAATATACTCACG TERM 2505 1784753 - 1784738 - G 75 -10.4 -3.06671 | AGAGTCATTGCAACA CGGGCT TCAA AGCCCG AAAATGCTTGTAATA secE 1785238 - 1784828 - | preprotein translocase subunit SecE tldD 1786938 - 1785493 - | protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD TERM 2506 1786208 - 1786224 + g 83 -12.3 -2.52464 | GGCATTGAGCCAGCA GGTGCAG CGA CTGCACC TAAATTCACAACCGC TERM 2507 1786595 - 1786634 + g 71 -6.4 -4.21974 | overlap 1786591 GCATAGCGTTTGATA GCGGTCGTTTCTTCGAAA GGTT TTACCAATAACCGACCGC TTTCTTGCGTAATAC HAPS_1819 1787057 - 1786932 - | hypothetical protein HAPS_1820 1787069 - 1787896 + | alpha/beta superfamily hydrolase, putative esterase TERM 2508 1787950 - 1787995 + F 93 -12.3 -3.80858 | opp_overlap 1787954, overlap 1787991 ATTTCAGATTATCTA TATACGCTATAAAGTATAA AACCATAG TTATACTTTACAGCGTATA TTTCATAAATTATAC TERM 2509 1787991 - 1787954 - f 79 -10.9 -2.9294 | opp_overlap 1787950 CAGATTATCTATATA CGCTATAAAGTATAA AACCATAG TTATACTTTACAGCG TATATTTCATAAATT HAPS_1821 1788043 - 1788282 + | XRE family transcriptional regulator TERM 2510 1788989 - 1789018 + G 80 -4.3 -5.22039 | overlap 1788993 1788993 1788994 AGCTGTTGAACGTTT TGATCGCCGTCTT AGTC AAGATGGCAGTTA TTTTTTACGTTTACC TERM 2511 1788993 - 1789015 + G 74 -4.9 -4.68528 | gap 1, overlap 1788993 1788989 1788994 GTTGAACGTTTTGAT C-GCCGTCTT AGTC AAGATGGCAG TTATTTTTTACGTTT hipA 1788276 - 1789592 + | HipA-like protein, regulator with hipB TERM 2512 1790705 - 1790676 - f 76 -5.8 -4.62302 | GAAGACGGGTAAAAA GGTGCAACAAAA TAACCG CTTTTTTGCACC GAATAAATCACCCCC dsbA 1790985 - 1791599 + | DSBA oxidoreductase TERM 2513 1791601 - 1791656 + T 100 -12.8 -4.56597 | opp_overlap 1791602 1791604, overlap 1791604 TGAAAGGACTGTAAA AGAGCGGTGGGATTTTGAGGGGATTT TACA AATTTCTTTCAAAATTCCACCGCTTG TTTTTAACCAGCCAC TERM 2514 1791653 - 1791604 - T 72 -7.9 -3.68036 | opp_overlap 1791601 1791604, overlap 1791602 AAGGACTGTAAAAGA GCGGTGGGATTTTGAGGGGATTT TACA AATTTCTTTCAAAATTCCACCGC TTGTTTTTAACCAGC TERM 2515 1791604 - 1791653 + T 100 -16.7 -4.40561 | opp_overlap 1791604 1791602, overlap 1791601 AAGGACTGTAAAAGA GCGGTGGGATTTTGAGGGGATTT TACA AATTTCTTTCAAAATTCCACCGC TTGTTTTTAACCAGC HAPS_1825 1792532 - 1791660 - | LysR family transcriptional regulator TERM 2516 1792501 - 1792483 - G 77 -11 -2.87344 | GATGCTTTGGAGAGA CTGCCGTC TTG GACGACAG AGACGAATAGAGATA HAPS_1826 1795450 - 1792535 - | Type III restriction-modification system EcoPI enzyme, subunit res TERM 2517 1794363 - 1794379 + g 74 -5.1 -4.82901 | TGATTAAACGAATAA GGTGAGA TAA TTTCGCC TTTTTGTAAAGCCAG TERM 2518 1795059 - 1795046 - G 78 -3.7 -5.25656 | AAAATCATCAAAAAA CCGAC TTCT GGCGG ATGCAGACTCCAAAA HAPS_1827 1797376 - 1795454 - | Type III restriction-modification system EcoPI enzyme mod (M.EcoPI) (EcoPI methyltransferase) HAPS_1828 1798757 - 1797564 - | putative ATPase (AAA+ superfamily) TERM 2519 1798676 - 1798649 - G 74 -6.4 -4.35524 | opp_overlap 1798649 1798674 TTTTTAAACCTAAAA TCAAGCGATT GATGTCGT AATCGCCTGA AAATAGCGTTTTCAT HAPS_1829 1799185 - 1799397 + | hypothetical protein TERM 2520 1799409 - 1799434 + T 76 -6.1 -4.55128 | ATAATGGGATTTAGA CACCGTTTGGG GAAA TTCAGGCGGTG TTTTGGTTTGGAAGT HAPS_1830 1799882 - 1799484 - | MerR family transcriptional regulator TERM 2521 1799788 - 1799801 + g 79 -6.7 -4.49314 | TTAGCTTGAAAAGTT GGCTT GATT AAGCC TTGTTTTTCATAATA HAPS_1831 1799952 - 1800566 + | Co/Zn/Cd efflux system component, CDF family cation diffusion facilitator TERM 2522 1800575 - 1800603 + T 100 -9.7 -5.61881 | opp_overlap 1800575 CAGTTAATTTATAAA CACCGTTTGAA TTTGATT TTCAAGCGGTG TTTTTGTTTTTAAAA TERM 2523 1800603 - 1800575 - T 74 -7.5 -3.98083 | opp_overlap 1800575 CAGTTAATTTATAAA CACCGTTTGAA TTTGATT TTCAAGCGGTG TTTTTGTTTTTAAAA HAPS_1832 1801043 - 1800657 - | MerR family transcriptional regulator, heavy metal-dependent TERM 2524 1800867 - 1800848 - G 73 -7.1 -4.11216 | CTTGCAGTGCCAAAA GCTCGCC AATTTG GGCAAGC GAAAAGCCCACGCCC HAPS_1833 1801319 - 1801191 - | hypothetical protein TERM 2525 1801402 - 1801375 - H 88 -8.4 -4.68593 | opp_overlap 1801375 TTGATTAGCTAAAAA CATTGGGCGGAC TTAT GTTTGCCCAATG TTTGCCAAATCCCAT TERM 2526 1801375 - 1801402 + H 95 -12.8 -3.55563 | opp_overlap 1801375 TTGATTAGCTAAAAA CATTGGGCGGAC TTAT GTTTGCCCAATG TTTGCCAAATCCCAT TERM 2527 1801541 - 1801523 - g 71 -5.3 -4.62069 | gap 1, overlap 1801527 TGCCGACGGCAAAAA CGAAGTGC CGAC GCACT-CG ATGGTAGGCGACAAT HAPS_1834 1801437 - 1802183 + | putative exported protein involved with bacterial secreted proteins TERM 2528 1802201 - 1802222 + F 100 -13.1 -5.37593 | opp_overlap 1802201 GCAATAAGGCAAAAA CACCGCTTT TGAT AAAGCGGTG TTTTTTACTTTAAAA TERM 2529 1802222 - 1802201 - f 100 -13.1 -4.8143 | opp_overlap 1802201 GCAATAAGGCAAAAA CACCGCTTT TGAT AAAGCGGTG TTTTTTACTTTAAAA TERM 2530 1802258 - 1802240 - f 95 -8.2 -5.0538 | opp_overlap 1802239 1802233 1802240 1802241, overlap 1802241 TTTTACTTTAAAAAA CTTTCAGG CTG CCTGAAAA ATTTATATTTCCAAA TERM 2531 1802257 - 1802241 - f 78 -9.5 -3.62746 | opp_overlap 1802240 1802239 1802233 1802241, overlap 1802240 TTTACTTTAAAAAAC TTTCAGG CTG CCTGAAA AATTTATATTTCCAA TERM 2532 1802241 - 1802257 + F 71 -9.5 -2.51057 | opp_overlap 1802241 1802240, overlap 1802240 1802239 1802233 TTTACTTTAAAAAAC TTTCAGG CTG CCTGAAA AATTTATATTTCCAA TERM 2533 1802948 - 1802935 - g 73 -2.3 -5.24531 | opp_overlap 1802935 ATTGCCGATAAAAAA GCGGT TCAG ACAGC GTTTATGCTCGGTGC HAPS_1835 1802365 - 1803312 + | 2-nitropropane dioxygenase NPD TERM 2534 1803390 - 1803350 - f 82 -10.6 -3.54902 | gap 2, opp_overlap 1803350, overlap 1803343 1803346 GCACTGAACAAGCAA TGCTTGACACCCAGCACGGC AGA GCCGTACTGGGT-T-ACGCA TAATTCAGCCCCTTT TERM 2535 1803414 - 1803394 - f 82 -11.1 -3.35679 | CTGGGTTACGCATAA TTCAGCCCC TTT GGGGCTGGA ATTAGAGTGACAAAG TERM 2536 1803445 - 1803429 - f 93 -12.3 -3.96188 | AATTAGAGTGACAAA GAGTGGC AAA GCCACTC AACTATGCGTAACCT TERM 2537 1804348 - 1804365 + G 70 -2.8 -5.06816 | opp_overlap 1804348 AGTTATCGAGATAAT CAAAAA CAATTC TTTTTG TTTTTATTGAAAAAT msrA 1803784 - 1804605 + | putative methionine sulfoxide reductase A TERM 2538 1804646 - 1804608 - f 81 -8.3 -4.26076 | opp_overlap 1804613, overlap 1804613 TCACTGGGATTAAAA TATAATGCCGTCTAAAA TCAAC TTTCAGACGGCATTTTC ATTTTGTGAGCTTGC TERM 2539 1804641 - 1804613 - f 95 -12.6 -3.99481 | opp_overlap 1804613, overlap 1804608 GGGATTAAAATATAA TGCCGTCTAAAA TCAAC TTTCAGACGGCA TTTTCATTTTGTGAG TERM 2540 1804613 - 1804641 + F 100 -10.4 -4.73108 | opp_overlap 1804613 1804608 GGGATTAAAATATAA TGCCGTCTAAAA TCAAC TTTCAGACGGCA TTTTCATTTTGTGAG TERM 2541 1804688 - 1804703 + F 72 -7.6 -3.66589 | CAATAAAGCCTTTAT CCAGTA TTGA TACTGG TTGTCGTTTATGATT TERM 2542 1805068 - 1805032 - g 90 -12.5 -3.60296 | overlap 1805039 CAGTTTTATCTCAAA TTTCAAATTGTTCAGAC AGT GTCCGAACAATTCGCAA TACCTGTGTTTACAC TERM 2543 1805061 - 1805039 - g 88 -11.4 -3.71917 | overlap 1805032 ATCTCAAATTTCAAA TTGTTCAGAC AGT GTCCGAACAA TTCGCAATACCTGTG TERM 2544 1805413 - 1805427 + G 77 -8.6 -3.91897 | TTTCTGCTGGAACTC GGCAAA GGC TTTGCC TTTATCGGTCGGCAA HAPS_1837 1804753 - 1805775 + | putative cytoplasmic protein TERM 2545 1805810 - 1805778 - T 78 -7.7 -4.26344 | opp_overlap 1805782, overlap 1805781 1805782 ATATTTGGACTAAAA TAATGCCGTCTGACA AAC TTTCAGACGGCTTTC TTATCTACAAGCGGT TERM 2546 1805807 - 1805781 - T 86 -9.4 -4.25256 | opp_overlap 1805782, overlap 1805778 1805782 TTTGGACTAAAATAA TGCCGTCTGACA AAC TTTCAGACGGCT TTCTTATCTACAAGC TERM 2547 1805782 - 1805806 + T 100 -12.9 -4.38927 | opp_overlap 1805781 1805778 1805782 TTGGACTAAAATAAT GCCGTCTGACA AAC TTTCAGACGGC TTTCTTATCTACAAG TERM 2548 1805806 - 1805782 - T 90 -12.9 -3.14672 | opp_overlap 1805782, overlap 1805781 1805778 TTGGACTAAAATAAT GCCGTCTGACA AAC TTTCAGACGGC TTTCTTATCTACAAG TERM 2549 1805831 - 1805849 + T 76 -4.6 -5.1517 | TACAAGCGGTCGAAT TTTGCAAA AAA TCTGCAAA TTTTTCATTTCTTTT thiE 1806729 - 1806067 - | thiamine-phosphate pyrophosphorylase TERM 2550 1806321 - 1806337 + g 71 -9.5 -2.79004 | opp_overlap 1806317 1806321, overlap 1806320 1806318 CCGCCCAATAATCAA TTTCAGG CAG CCTGAAA CTATTTTGCAAATCA TERM 2551 1806337 - 1806321 - G 77 -9.5 -3.53444 | opp_overlap 1806321 1806320 1806318, overlap 1806317 CCGCCCAATAATCAA TTTCAGG CAG CCTGAAA CTATTTTGCAAATCA thiD 1807546 - 1806746 - | phosphomethylpyrimidine kinase thiM 1808366 - 1807557 - | hydroxyethylthiazole kinase TERM 2552 1808517 - 1808479 - R 100 -27 -5.56263 | opp_overlap 1808488 ACCAGAAAATAAAAA CACACGCAAGCTACCTGA TAT TCAGGCAGCTTGCGTGTG CATCAAAGAGATAGA TERM 2553 1808488 - 1808508 + r 77 -9.7 -3.1355 | opp_overlap 1808479 TAAAAACACACGCAA GCTACCTGA TAT TCAGGCAGC TTGCGTGTGCATCAA tldD 1811497 - 1810052 - | protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD TERM 2554 1810767 - 1810783 + g 83 -12.3 -2.52464 | GGCATTGAGCCAGCA GGTGCAG CGA CTGCACC TAAATTCACAACCGC TERM 2555 1811154 - 1811193 + g 71 -6.4 -4.21974 | overlap 1811145 1811150 GCATAGCGTTTGATA GCGGTCGTTTCTTTGAAA GGTT TTACCAATAACCGACCGC TTTCTTGCGTAATAC HAPS_1844 1811616 - 1811491 - | hypothetical protein HAPS_1845 1811628 - 1812455 + | predicted hydrolase of the alpha/beta superfamily TERM 2556 1812509 - 1812554 + F 93 -12.3 -3.80858 | opp_overlap 1812513, overlap 1812550 ATTTCAGATTATCTA TATACGCTATAAAGTATAA AACCATAG TTATACTTTACAGCGTATA TTTCATAAATTATAC TERM 2557 1812550 - 1812513 - f 79 -10.9 -2.9294 | opp_overlap 1812509 CAGATTATCTATATA CGCTATAAAGTATAA AACCATAG TTATACTTTACAGCG TATATTTCATAAATT hipB 1812602 - 1812841 + | transcriptional regulator TERM 2558 1813548 - 1813577 + G 80 -4.3 -5.22039 | overlap 1813552 1813552 1813553 AGCTGTTGAACGTTT TGATCGCCGTCTT AGTC AAGATGGCAGTTA TTTTTTACGTTTACC TERM 2559 1813552 - 1813574 + G 74 -4.9 -4.68528 | gap 1, overlap 1813548 1813552 1813553 GTTGAACGTTTTGAT C-GCCGTCTT AGTC AAGATGGCAG TTATTTTTTACGTTT hipA 1812835 - 1814151 + | HipA protein, co-regulate with HipB TERM 2560 1815392 - 1815370 - f 83 -12.2 -2.74605 | overlap 1815367 1815366 GTGGCGGAAAATTCA GTTATCCAAA AAT TTTGGATAAC TACTGAAACGTGAAC TERM 2561 1815442 - 1815418 - f 87 -11.5 -3.6215 | opp_overlap 1815419, overlap 1815419 TGAACTGATTTTAAA TTTGTGCAGCA GGT TGCTGCACAAT TGCTATGGCTAACCA TERM 2562 1815419 - 1815441 + F 100 -15 -3.2794 | opp_overlap 1815418 1815419 GAACTGATTTTAAAT TTGTGCAGCA GGT TGCTGCACAA TTGCTATGGCTAACC TERM 2563 1815441 - 1815419 - f 100 -15 -2.76969 | opp_overlap 1815419, overlap 1815418 GAACTGATTTTAAAT TTGTGCAGCA GGT TGCTGCACAA TTGCTATGGCTAACC TERM 2564 1815585 - 1815544 - f 76 -5.9 -4.55287 | opp_overlap 1815546, overlap 1815546 TTTAGGTAGATAAAA GAGCGGTCGTTTTTGTAAA AGAT CTTGCGAAAACAACCGCTT GTCATTCTATCTTCT TERM 2565 1815546 - 1815583 + F 80 -10 -3.60696 | opp_overlap 1815544 1815546 TAGGTAGATAAAAGA GCGGTCGTTTTTGTAA AAGATC TTGCGAAAACAACCGC TTGTCATTCTATCTT TERM 2566 1815583 - 1815546 - f 77 -8.5 -3.88698 | opp_overlap 1815546, overlap 1815544 TAGGTAGATAAAAGA GCGGTCGTTTTTGTAAA AGAT CTTGCGAAAACAACCGC TTGTCATTCTATCTT HAPS_1850 1816029 - 1816388 + | hypothetical protein TERM 2567 1816403 - 1816420 + F 100 -11.3 -5.37043 | ATTTAAGGCTTGTTA GGTGCGT ATGA ACGCACC TTTTTTGTCTAAAAT pykF 1817480 - 1817923 + | pyruvate kinase HAPS_1855 1818945 - 1818358 - | N6-adenine-specific methylase TERM 2568 1818668 - 1818684 + g 77 -5.1 -4.84359 | TTCTTTTTGAGTTGG TTTGCTG CGT CTGCAAA TTTTTCTAAGAATAC TERM 2569 1818996 - 1819016 + H 100 -7.7 -5.46698 | CTAATACAAGTTTAT TCCATTTTT ATC GAAAATGGA TTTTTTAATTTTAAG ftsY 1819044 - 1820411 + | cell division protein, signal recognition particle GTPase fstE 1820501 - 1821064 + | cell division ATP-binding protein TERM 2570 1822178 - 1822155 - T 71 -8.9 -3.18274 | CCCATTTCAACTTAA CGGTGATCG TCTAGG CGATCACCA AAATCAATCATAAAT TERM 2571 1822712 - 1822677 - T 83 -7.1 -4.77165 | gap 1, opp_overlap 1822677 TCGTTCATAATAAAA TACCTGTGTCTGA-AT GTATT ATCTCAGAAACAGGTA TTTACACAAATTGTG TERM 2572 1823815 - 1823829 + T 84 -10 -3.68908 | CTTTTTCGCAATGTC GCCTTC ATA GAAGGC TTTAGATCCCTCTTT TERM 2573 1823915 - 1823927 + T 88 -4.9 -5.5943 | ATTAATGGTCTGCCA TCTTT GAA AAAGA TTTTTTTACTGCTTT HAPS_1861 1824573 - 1824454 - | hypothetical protein gst 1824766 - 1825380 + | glutathione S-transferase TERM 2574 1825414 - 1825378 - T 73 -7.3 -4.15106 | opp_overlap 1825387, overlap 1825380 1825383 1825385 1825387 CAGGAAGGCTTAAAA TAGAACATAGGCGAGAA TAA TTCTCGCCTTTTCTCTT TCATTCTATCTGTTT TERM 2575 1825412 - 1825380 - T 84 -9.9 -3.67 | opp_overlap 1825387, overlap 1825378 1825383 1825385 1825387 GGAAGGCTTAAAATA GAACATAGGCGAGAA TAA TTCTCGCCTTTTCTC TTTCATTCTATCTGT TERM 2576 1825409 - 1825383 - T 74 -8 -3.95836 | opp_overlap 1825387, overlap 1825380 1825378 1825385 1825387 AGGCTTAAAATAGAA CATAGGCGAGAA TAA TTCTCGCCTTTT CTCTTTCATTCTATC TERM 2577 1825407 - 1825385 - T 82 -10.6 -3.56378 | opp_overlap 1825387, overlap 1825383 1825380 1825378 1825387 GCTTAAAATAGAACA TAGGCGAGAA TAA TTCTCGCCTT TTCTCTTTCATTCTA TERM 2578 1825387 - 1825405 + T 100 -13.2 -4.84539 | opp_overlap 1825385 1825383 1825380 1825378 1825387 TTAAAATAGAACATA GGCGAGAA TAA TTCTCGCC TTTTCTCTTTCATTC TERM 2579 1825405 - 1825387 - T 95 -13.2 -3.34709 | opp_overlap 1825387, overlap 1825385 1825383 1825380 1825378 TTAAAATAGAACATA GGCGAGAA TAA TTCTCGCC TTTTCTCTTTCATTC HAPS_1863 1825957 - 1825415 - | esterase of the alpha/beta hydrolase fold, possible esterase glpR 1826800 - 1826042 - | glycerol-3-phosphate regulon repressor TERM 2580 1826861 - 1826897 + H 95 -10.5 -4.39002 | opp_overlap 1826865 1826870 1826875, overlap 1826862 1826865 1826870 1826885 1826890 1826892 TTTTACCTTGAGTGA TTAACAAAATTTAACAA AAA TTGTTAAATTTTGTGAG TTTTGTCACAGATTT TERM 2581 1826862 - 1826896 + H 84 -11.8 -3.22678 | opp_overlap 1826865 1826870 1826875, overlap 1826861 1826865 1826870 1826885 1826890 1826892 TTTACCTTGAGTGAT TAACAAAATTTAACAA AAA TTGTTAAATTTTGTGA GTTTTGTCACAGATT TERM 2582 1826893 - 1826865 - H 95 -13.5 -3.18383 | opp_overlap 1826862 1826861 1826865 1826870 1826885 1826890 1826892, overlap 1826870 1826875 ACCTTGAGTGATTAA CAAAATTTAACAA AAA TTGTTAAATTTTG TGAGTTTTGTCACAG TERM 2583 1826865 - 1826893 + H 90 -13.5 -2.80077 | opp_overlap 1826865 1826870 1826875, overlap 1826862 1826861 1826870 1826885 1826890 1826892 ACCTTGAGTGATTAA CAAAATTTAACAA AAA TTGTTAAATTTTG TGAGTTTTGTCACAG TERM 2584 1826870 - 1826888 + H 84 -7.6 -4.5538 | opp_overlap 1826870 1826865 1826875, overlap 1826865 1826862 1826861 1826885 GAGTGATTAACAAAA TTTAACAA AAA TTGTTAAA TTTTGTGAGTTTTGT TERM 2585 1826888 - 1826870 - H 88 -7.6 -4.72497 | opp_overlap 1826865 1826862 1826861 1826870 1826885, overlap 1826865 1826875 GAGTGATTAACAAAA TTTAACAA AAA TTGTTAAA TTTTGTGAGTTTTGT TERM 2586 1826890 - 1826909 + H 74 -2.9 -5.3658 | opp_overlap 1826865 1826875, overlap 1826865 1826862 1826861 1826885 1826892 CAAAAATTGTTAAAT TTTGTGA GTTTTG TCACAGA TTTTATTTTTATAGT TERM 2587 1827156 - 1827172 + G 73 -9.5 -3.16553 | overlap 1827154 1827152 AACGCTATTCCTTTT GCATCTA AAT TAGATGC TGTATTACTACTTGT TERM 2588 1827688 - 1827702 + G 79 -5.8 -4.83615 | opp_overlap 1827684 1827687, overlap 1827684 GAGATTACACACCAT TATCAA TGG TTGATA TTTTTGTAAAAGATC HAPS_1865 1826979 - 1827887 + | 3-hydroxyisobutyrate dehydrogenase family protein HAPS_1866 1827889 - 1829130 + | type III effector Hrp-dependent outers, secretion system component TERM 2589 1829274 - 1829290 + G 70 -5.9 -4.33956 | GGTTCATCTTTAGGG CGATTAG AAG TTAATCG TTTATCTATTTTAGA fucA 1829127 - 1829759 + | class II aldolase/adducin family protein TERM 2590 1830241 - 1830231 - g 73 -5.4 -4.58663 | ACTATCTGTTAAAAA GTCA ATT TGAC ACCTTGGAAATTGTA tsa 1829762 - 1830544 + | hydroxypyruvate isomerase TERM 2591 1830851 - 1830867 + G 89 -9.5 -4.17556 | opp_overlap 1830850 1830847 1830846 1830851 GGTTATGAAATTAAT TTCCTTG CAA CAAGGAA TTTATTGGAAATCTG TERM 2592 1830867 - 1830851 - g 70 -9.5 -2.73701 | opp_overlap 1830851, overlap 1830850 1830847 1830846 GGTTATGAAATTAAT TTCCTTG CAA CAAGGAA TTTATTGGAAATCTG TERM 2593 1831331 - 1831319 - g 71 -6.3 -4.13945 | opp_overlap 1831319 1831318 ACCGTGAGTGTAAAA CAGAT GTT ATCTG ATTTAGTTCAAGTAA wbpK 1830569 - 1831516 + | NAD-dependent epimerase/dehydratase gntP 1831528 - 1832994 + | gluconate permease TERM 2594 1833035 - 1833005 - f 95 -14.2 -2.73542 | opp_overlap 1833006 TTTAATTTTTAATGA TCAGGCTGTAAATA CTA TATTTACAGCCTGT TTTATTTAGGAGGAA TERM 2595 1833006 - 1833034 + F 100 -17.7 -4.86731 | opp_overlap 1833005 TTAATTTTTAATGAT CAGGCTGTAAATA CTA TATTTACAGCCTG TTTTATTTAGGAGGA TERM 2596 1833204 - 1833187 - g 70 -2.7 -5.12707 | CTAAAGGTCAAAAAA TAAAAGC TCTT GCTTTAA AGTATGAAGATAATA TERM 2597 1833809 - 1833776 - g 79 -8.3 -4.00084 | opp_overlap 1833801, overlap 1833796 1833801 AGTAGGAAAAGACAA TATTGCTCATTTACT ATCA AGTAAAGGAGCTATA GCTACTTTACAGTAT HAPS_1871 1833054 - 1834400 + | phospholipase/carboxylesterase TERM 2598 1834487 - 1834522 + T 83 -7.1 -4.77165 | gap 1, opp_overlap 1834487 CACAATTTGTGTAAA TACCTGTTTCTGAGAT AATAC AT-TCAGACACAGGTA TTTTATTATGAACGA TERM 2599 1834806 - 1834792 - T 86 -10 -4.10657 | GTAGACGGTTTAAAA GGCTTC CTG GAAGCC ATCAATGCAGTCTAT TERM 2600 1835029 - 1835046 + T 84 -4.9 -5.32944 | gap 1, opp_overlap 1835029 GGCTGGGAAGATAAC TG-GGCAA ATA TTGCCACA TTTTTTGATTATCCG TERM 2601 1835268 - 1835291 + T 71 -8.9 -3.18274 | ATTTATGATTGATTT TGGTGATCG CTTAGA CGATCACCG TTAAGTTGAAATGGG TERM 2602 1835409 - 1835371 - T 100 -12.8 -4.74504 | opp_overlap 1835358 1835371 1835378, overlap 1835391 AGCCTAATTTAAAAA TTTAAAATGGGTTTTAAA ATT TCTTAAACCCATTTTAAA AACCGATCAAACCTG HAPS_1873 1835538 - 1835416 - | hypothetical protein TERM 2603 1835530 - 1835517 - G 84 -2.3 -5.7946 | CCCCCAACAAAAAAA TGCGG TAAG CCCCA TCACACAAAGCCCCA TERM 2604 1836320 - 1836281 - R 76 -5.8 -4.58395 | gap 1, opp_overlap 1836283 1836283 1836284, overlap 1836283 1836284 TTCATGTTTCAAAAA GAG-GGCTTAAAGCCTTGT ACT ATAAGGCGTTAAGCCACTT TTTAGCAACAAATTT TERM 2605 1836317 - 1836283 - R 80 -8.6 -3.90762 | opp_overlap 1836283 1836283 1836284, overlap 1836281 1836284 CATGTTTCAAAAAGA GGGCTTAAAGCCTTGT ACT ATAAGGCGTTAAGCCA CTTTTTAGCAACAAA TERM 2606 1836283 - 1836317 + r 82 -10.8 -3.33744 | opp_overlap 1836283 1836281 1836284, overlap 1836283 1836284 CATGTTTCAAAAAGA GGGCTTAAAGCCTTGT ACT ATAAGGCGTTAAGCCA CTTTTTAGCAACAAA TERM 2607 1836283 - 1836318 + r 95 -10.6 -4.56775 | gap 1, opp_overlap 1836283 1836281 1836284, overlap 1836283 1836284 CATGTTTCAAAAAGA G-GGCTTAAAGCCTTGT ACT ATAAGGCGTTAAGCCAC TTTTTAGCAACAAAT TERM 2608 1836316 - 1836284 - R 85 -12.1 -2.93975 | opp_overlap 1836283 1836283 1836284, overlap 1836283 1836281 ATGTTTCAAAAAGAG GGCTTAAAGCCTTGT ACT ATAAGGCGTTAAGCC ACTTTTTAGCAACAA TERM 2609 1836284 - 1836316 + r 95 -14.3 -2.60032 | opp_overlap 1836284 1836283 1836281, overlap 1836283 1836283 ATGTTTCAAAAAGAG GGCTTAAAGCCTTGT ACT ATAAGGCGTTAAGCC ACTTTTTAGCAACAA TERM 2610 1836610 - 1836645 + r 95 -11.4 -4.57341 | gap 1, opp_overlap 1836610 1836611 1836619, overlap 1836610 1836611 1836613 CAAGAATCAAAATTA G-GGCTTAAAGCCTTGT AGT ATAAGGCTTTAAGTCAC TTTTTACCAACACTT TERM 2611 1836610 - 1836644 + r 85 -11.6 -3.33922 | opp_overlap 1836610 1836611 1836619, overlap 1836610 1836611 1836613 CAAGAATCAAAATTA GGGCTTAAAGCCTTGT AGT ATAAGGCTTTAAGTCA CTTTTTACCAACACT TERM 2612 1836611 - 1836643 + r 95 -15.1 -2.60032 | opp_overlap 1836611 1836610 1836619, overlap 1836610 1836610 1836613 AAGAATCAAAATTAG GGCTTAAAGCCTTGT AGT ATAAGGCTTTAAGTC ACTTTTTACCAACAC TERM 2613 1836643 - 1836611 - R 75 -10.7 -2.52152 | opp_overlap 1836610 1836610 1836611 1836613, overlap 1836610 1836619 AAGAATCAAAATTAG GGCTTAAAGCCTTGT AGT ATAAGGCTTTAAGTC ACTTTTTACCAACAC TERM 2614 1836613 - 1836641 + r 100 -14.1 -2.83903 | opp_overlap 1836611 1836610 1836619, overlap 1836611 1836610 1836610 GAATCAAAATTAGGG CTTAAAGCCTTGT AGT ATAAGGCTTTAAG TCACTTTTTACCAAC TERM 2615 1836713 - 1836684 - R 84 -5.1 -5.28942 | opp_overlap 1836684 TATGCCAAATAAAAA CAACCTGTATC AAACAAGA AACACAGGTTG TTATATCAATCTTGT TERM 2616 1836754 - 1836764 + r 81 -2.6 -5.64421 | CGAATATATCTCAGC TATT GCC AATA TTTTTTCTTTGAAGT dld 1838447 - 1836753 - | D-lactate dehydrogenase TERM 2617 1838646 - 1838627 - R 100 -8.6 -5.24003 | opp_overlap 1838627 AACAAAAAGCAAAAA CCCCAGTA TCTC TACTAGGG TTTAAATTAATGCCC TERM 2618 1840739 - 1840753 + r 73 -5.7 -4.58213 | TGGTCTTCCGGCGAA CGAGT TTTTC ACTCG TTTTATCGTTACTTA TERM 2619 1841835 - 1841850 + r 76 -7.6 -4.00323 | ATCACCCTGTGTCGC TTGGCT TCCC AGCCAA TTCTTCTGTCTTTGC TERM 2620 1842195 - 1842220 + r 73 -3.3 -5.15167 | opp_overlap 1842196, overlap 1842196 TATTAACTACTAAAC ACTTGACTG CTTTTGTT CAGTCAAGA TTTTTCTTACTACTC TERM 2621 1842614 - 1842597 - R 70 -9.1 -3.08187 | opp_overlap 1842597 AAAGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC TERM 2622 1844374 - 1844384 + r 85 -4 -5.65177 | opp_overlap 1844374 AAACCAACGCAAGTA CTTT TTT AAAG TTTTTTTCTAAATGT murI 1845261 - 1844458 - | glutamate racemase ubiC 1845798 - 1845295 - | 4-hydroxybenzoate synthetase (chorismate lyase) neuA 1846398 - 1845799 - | N-acylneuraminate cytidylyltransferase/lysophospholipase L1 and related esterases involved in polysaccharide synthesis trpS 1847465 - 1846437 - | tryptophanyl-tRNA synthetase ubiD 1849028 - 1847559 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 2623 1848771 - 1848788 + g 71 -6.9 -3.97056 | GAACGCCAACAACTT GCCTAGC TCTC GCAAGGC TTTGGTATCTTCTTG TERM 2624 1849121 - 1849089 - R 100 -12.1 -5.05113 | TCTAGAGAAATAAAA GAGCTGACCCCAGTA TGA TACTGAAATCAGCCC ATTAAAACTATCTAT dnaJ 1850324 - 1849188 - | chaperone protein TERM 2625 1850126 - 1850138 + g 70 -3.3 -4.93365 | GGTGACCGTACTGAT CGTAC ATT GCACG TTTTTCGTTGTCCCC TERM 2626 1850318 - 1850328 + g 78 -4 -5.35222 | CGTAGTAATCTTTTT TACT CAT AGTA TTTTTTGTAAATTTT vapD 1850802 - 1850377 - | virulence-associated protein D HAPS_1888 1850996 - 1850826 - | hypothetical protein TERM 2627 1850962 - 1850945 - G 100 -12.7 -4.41956 | opp_overlap 1850945 AGATATACACCAAAA GGGCGTG TTGC CACGCCC TTTGTAGGGACGCAG TERM 2628 1850945 - 1850962 + g 93 -12.7 -3.85698 | opp_overlap 1850945 AGATATACACCAAAA GGGCGTG TTGC CACGCCC TTTGTAGGGACGCAG dnaK 1852922 - 1851021 - | chaperone protein DnaK TERM 2629 1852587 - 1852597 + g 85 -6.8 -5.15117 | overlap 1852588 TTCCGCAGAGATTTG TGGC GGA GCCA TTTTTTCGCCTTTTA TERM 2630 1853051 - 1853029 - R 74 -4.2 -5.04249 | gap 1 TTTTCAAAAAAGAAA CGGGAA-GT TGTGCT ACGTTCCCG CTCAGACGGAACAAT TERM 2631 1853135 - 1853122 - R 88 -5.3 -5.63857 | AAAAATTTAAAAAAA TGTGT ATTA ACACA CACACACTATTTCTC chaA 1854231 - 1853152 - | calcium/proton antiporter TERM 2632 1853720 - 1853706 - G 71 -4.2 -4.88684 | AAGAGAAATATAAAA CGAGTG ACG CAATCG CAACAAATACCAACT TERM 2633 1853746 - 1853728 - G 77 -8.2 -4.20918 | CGCAATCGCAACAAA TACCAACT GAG AGCTGGTA TAAGTCCCCCCTGCC TERM 2634 1856605 - 1856595 - g 89 -6.8 -5.26875 | TTGGCAACCAAAAAA CCGA TTT TCGG CATCTGCTTAGGACA carA 1855821 - 1856945 + | carbamoyl phosphate synthase small subunit TERM 2635 1856994 - 1857052 + F 93 -13.4 -3.01712 | gap 3, opp_overlap 1856994 1857009 TCTTGTGAAAAATGA -CCGCTTAGTATTCAAGTCCCCTCCCCCG CAAG CGGGGGAGGGGACTA-AATAGTG-GCGGA TATTAAAAGACAACC TERM 2636 1857051 - 1856994 - f 100 -19.4 -3.23708 | gap 2, opp_overlap 1856994, overlap 1857009 TCTTGTGAAAAATGA CCGCTTAGTATTCAAGTCCCCTCCCCCG CAAG CGGGGGAGGGGACT-AAATAGTG-GCGG ATATTAAAAGACAAC TERM 2637 1857038 - 1857009 - f 100 -25.1 -3.09516 | opp_overlap 1856994, overlap 1856994 CCGCTTAGTATTCAA GTCCCCTCCCCCG CAAG CGGGGGAGGGGAC TAAATAGTGGCGGAT carB 1857092 - 1860292 + | carbamoyl phosphate synthase large subunit TERM 2638 1860349 - 1860303 - T 80 -6.2 -4.95758 | gap 1, opp_overlap 1860306, overlap 1860306 ACTAGATTATAAAAA GAAGAGCTTGAATATACTTTA CAAAAC TAATGT-TATTCAAGCTCTTT ACTAATCTATTTAGA TERM 2639 1860306 - 1860346 + T 74 -7.9 -3.85082 | gap 1, opp_overlap 1860306 1860303 AGATTATAAAAAGAA GAGCTTGAATATACTTTA CAAAAC TAATGT-TATTCAAGCTC TTTACTAATCTATTT TERM 2640 1860346 - 1860306 - T 84 -7.9 -4.57057 | gap 1, opp_overlap 1860306, overlap 1860303 AGATTATAAAAAGAA GAGCTTGAATATACTTTA CAAAAC TAATGT-TATTCAAGCTC TTTACTAATCTATTT nhaA 1861549 - 1860356 - | Na+/H+ antiporter NhaA TERM 2641 1861797 - 1861811 + H 79 -5 -5.18355 | TTTATGATCCTCATT TTGGCT CAT AGTCAA TTTTTAATTTTTAGG rpmH 1861837 - 1861971 + | 50S ribosomal protein L34 TERM 2642 1861982 - 1861959 - f 76 -9.7 -3.07283 | overlap 1861958 1861972 TAAAGGTCGTAAAAG CTTATCTGC ATAATG GCAGATAAG TCAGCCAAAACACTC TERM 2643 1862022 - 1862046 + G 85 -11.5 -3.27525 | overlap 1862017 AAGCTAACTTTTCCT CGGGAGCTA CGTCTGT TAGCTCCCG TTCAATTTAAAGCGG rnpA 1861971 - 1862381 + | ribonuclease P HAPS_1897 1862399 - 1862626 + | hypothetical protein sirA 1863263 - 1862655 - | cell developmental protein SirA TERM 2644 1863310 - 1863326 + H 74 -8.1 -3.72051 | opp_overlap 1863309 1863306 CATACTTTAAATGAT GAGATTT GAT AAATCTC TTTCAAATTGTTAAA HAPS_1899 1863489 - 1864448 + | TRAP transporter solute receptor TAXI family protein TERM 2645 1864493 - 1864470 - f 70 -8.2 -3.36273 | gap 1, opp_overlap 1864470 CGTTTCTAATATTAA GGCAGG-AGTA AAT CACTTCCTGCC TTTTGTCGTTTTCAT TERM 2646 1864470 - 1864493 + F 84 -7.5 -4.68539 | gap 1, opp_overlap 1864470 CGTTTCTAATATTAA GGCAGG-AGT AAATC ACTTCCTGCC TTTTGTCGTTTTCAT TERM 2647 1864516 - 1864529 + F 76 -2.4 -5.4477 | overlap 1864513 1864509 GTTTTCATCAAGCGG TCAG ATTTGG CTGA TTTTTTTGCAAATTT dctM 1864590 - 1867268 + | TRAP C4-dicarboxylate transport system permease DctM subunit uspA 1867235 - 1867660 + | universal stress protein A TERM 2648 1867674 - 1867730 + F 100 -14.2 -4.5442 | opp_overlap 1867674 AGGTAATCAATACAA GCGGTGAGATTTTG-AAGTATTTTTGCA ATT TGCAAAA-TATTCACGAAATCTCACCGC TTTTGTCATTAGGAA TERM 2649 1867730 - 1867674 - f 93 -12 -3.7645 | opp_overlap 1867674 AGGTAATCAATACAA GCGGTGAGATTTTG-AAGTATTTTTGCA ATT TGCAAAA-TATTCACGAAATCTCACCGC TTTTGTCATTAGGAA HAPS_1902 1867873 - 1868178 + | DNA polymerase beta-like protein TERM 2650 1868259 - 1868308 + F 100 -17.5 -4.5442 | opp_overlap 1868259 GAAACACAAAAAAAA GCGGTAGGATTATGATAAAACTT TACA AAATTTTGTCACAATCCTACCGC TTTTGTCATTAAGAA TERM 2651 1868308 - 1868259 - f 100 -19.7 -6.15717 | opp_overlap 1868259 GAAACACAAAAAAAA GCGGTAGGATTATGATAAAACTT TACA AAATTTTGTCACAATCCTACCGC TTTTGTCATTAAGAA TERM 2652 1868318 - 1868330 + F 79 -4.9 -5.1287 | TACCGCTTTTGTCAT TAAGA AAA TCTTA TTTTTTCGATCTGCG TERM 2653 1868704 - 1868734 + G 79 -11.3 -2.57468 | opp_overlap 1868708, overlap 1868703 1868708 GAATGGACTGAATTT GAAATTGTGCAAG AGGTG CTTGCACAATTAC CTTGGTATCATCAAA TERM 2654 1868708 - 1868730 + G 79 -10.7 -3.22789 | opp_overlap 1868708, overlap 1868704 1868703 GGACTGAATTTGAAA TTGTGCAAG AGGTG CTTGCACAA TTACCTTGGTATCAT TERM 2655 1868730 - 1868708 - g 83 -10.7 -3.6715 | opp_overlap 1868708 1868704 1868703 GGACTGAATTTGAAA TTGTGCAAG AGGTG CTTGCACAA TTACCTTGGTATCAT TERM 2656 1869382 - 1869349 - g 70 -8.3 -3.28791 | opp_overlap 1869340 1869356 ATTGGCGTTGCAGAA TATCAACTTCAGCAA CTGT TGGCTGAATTTGATA TGGAATAAGCTGATG HAPS_1903 1868425 - 1869390 + | hypothetical protein TERM 2657 1869479 - 1869422 - T 89 -7.9 -5.00196 | opp_overlap 1869422 1869426, overlap 1869426 CGTTAAACAACAAAA TGAAGCGGTAGGATTATGATAAAACAT TGCA AAATGTTGTCAAAATCCTACCGCTTTA TATTTTGAACTATTT TERM 2658 1869422 - 1869479 + T 91 -11.8 -3.70051 | gap 2, opp_overlap 1869422 1869426, overlap 1869426 CGTTAAACAACAAAA TGAAGCGGTAGGATTATGATAAAACATT GCAA AATGTT--GTCAAAATCCTACCGCTTTA TATTTTGAACTATTT TERM 2659 1869426 - 1869475 + T 95 -10.4 -4.45771 | gap 2, opp_overlap 1869422 1869426, overlap 1869422 AAACAACAAAATGAA GCGGTAGGATTATGATAAAACATT GCAA AATGTT--GTCAAAATCCTACCGC TTTATATTTTGAACT TERM 2660 1869475 - 1869426 - T 80 -8.7 -3.89307 | opp_overlap 1869426 1869422, overlap 1869422 AAACAACAAAATGAA GCGGTAGGATTATGATAAAACAT TGCA AAATGTTGTCAAAATCCTACCGC TTTATATTTTGAACT HAPS_1904 1869888 - 1869496 - | transcriptional regulator gph 1870008 - 1870634 + | phosphoglycolate phosphatase comFC 1870609 - 1871367 + | predicted amidophosphoribosyltransferase TERM 2661 1872356 - 1872324 - g 80 -7.7 -4.41241 | TAAATTTGGATAAAA GCCCATCATCAAACC AAG AGAGTGATGATGGAC AAATGGGATTATTCT smf 1871378 - 1872373 + | Rossmann fold nucleotide-binding protein involved in DNA uptake TERM 2662 1872429 - 1872403 - T 100 -8.8 -5.64421 | opp_overlap 1872403 ATTTGAAACAAAAAA GGCATAGCAA AAAATCA CTGCTATGCC TAAATTTTGTAAATA pilT 1872883 - 1872464 - | plasmid stability-like protein/nucleic acid-binding protein, contains PIN domain TERM 2663 1872828 - 1872841 + g 71 -5.3 -4.62168 | ACCCCTTGATTACAT TTACC TTTA GGTAA TTTTCTAATTTCACT HAPS_1909 1873158 - 1872892 - | prevent-host-death family protein/antitoxin of toxin-antitoxin stability system fmt 1873340 - 1874290 + | methionyl-tRNA formyltransferase TERM 2664 1874307 - 1874326 + G 82 -8.6 -4.18908 | gap 1, overlap 1874306 GAAAAAACATTCCAC TC-GTGCCG TTA CGGCACAGA TTATTTTACAGGTGT rsmB 1874290 - 1875588 + | ribosomal RNA small subunit methyltransferase B trkA 1875604 - 1876980 + | potassium transporter peripheral membrane component TERM 2665 1877725 - 1877710 - f 80 -6.2 -5.00616 | opp_overlap 1877711 TCTTTTTTCAAAAAA TGTGAT TGTG ATCACA GAATTACTTTATAAG ald 1877879 - 1878988 + | alanine dehydrogenase TERM 2666 1879042 - 1879019 - f 82 -11 -3.44998 | opp_overlap 1879020 1879036, overlap 1879017 1879020 1879036 TATTGATCAAGAACA TTCCCCCTGA ATAA TCAGGGGGAT CTCTCCTATCCACCA TERM 2667 1879020 - 1879041 + F 100 -14.5 -2.97747 | opp_overlap 1879019 1879017 1879020 1879036, overlap 1879036 ATTGATCAAGAACAT TCCCCCTGA ATAA TCAGGGGGA TCTCTCCTATCCACC TERM 2668 1879041 - 1879020 - f 95 -14.5 -2.66517 | opp_overlap 1879020 1879036, overlap 1879019 1879017 1879036 ATTGATCAAGAACAT TCCCCCTGA ATAA TCAGGGGGA TCTCTCCTATCCACC TERM 2669 1879207 - 1879224 + G 79 -11.3 -2.66272 | overlap 1879204 1879203 TAACCTATATTTTAA CTGTCGC AGGG GCGACAG TCGGTTTCGGTGCGA TERM 2670 1880354 - 1880369 + G 70 -9 -3.16088 | overlap 1880353 TCTCTTCGTTTTAAC CGCACT AGGC AGTGCG ATTTTCGTCGGCTAT HAPS_1914 1879146 - 1880507 + | SNF family Na+-dependent transporter TERM 2671 1880609 - 1880640 + G 80 -6 -4.6951 | gap 1 CAATAACATTTACGA TGCTCTTAACGCC AAAAACA GG-GTTAAGGGCA TTTCTTTTACCTAAT HAPS_1915 1880563 - 1880676 + | hypothetical protein HAPS_1916 1881919 - 1880783 - | ISRssp2, family IS1595 TERM 2672 1881248 - 1881266 + g 89 -10.4 -4.24948 | opp_overlap 1881248 GAATTGGTGATTTAA TGCCAAAA TTG TTTTGGCA TTTTCAGTATAGTCC TERM 2673 1881266 - 1881248 - G 75 -10.4 -3.06133 | opp_overlap 1881248 GAATTGGTGATTTAA TGCCAAAA TTG TTTTGGCA TTTTCAGTATAGTCC hgaI 1883563 - 1882112 - | type II restriction enzyme HgaI TERM 2674 1883118 - 1883104 - G 75 -10 -3.03474 | opp_overlap 1883103 1883104, overlap 1883097 CTTCATAATGATATA GCCTAC CTT GTAGGC GTTTATCTAAAAGTA TERM 2675 1883104 - 1883118 + g 75 -10 -3.02202 | opp_overlap 1883104 1883097, overlap 1883103 CTTCATAATGATATA GCCTAC CTT GTAGGC GTTTATCTAAAAGTA HAPS_1918 1884629 - 1883553 - | moodification methylase HgaIA (M.HgaIA) (Cytosine-specific methyltransferase HgaIA) (M.HgaI-1) TERM 2676 1884289 - 1884259 - G 70 -9.2 -3.17586 | overlap 1884257 ATGAATCTAGGAACA TTCTCAATTAGGAT AAA ATCCAAATTAAGAA CATCAATAAATTCAA HAPS_1919 1885692 - 1884619 - | moodification methylase HgaIA (M.HgaIA) (Cytosine-specific methyltransferase HgaIA) (M.HgaI-1) TERM 2677 1885675 - 1885665 - G 76 -3.2 -5.31275 | overlap 1885640 CTGCACTAGAAAAAA GAGA TAA TCCC CTTATATTTTTTTTC HAPS_1920 1886241 - 1885939 - | transcriptional regulator TERM 2678 1886423 - 1886409 - H 71 -8.6 -3.14132 | opp_overlap 1886399 1886411 GCTTTCGCCCATCAA GATAGC TAC GCTATC TGATGATAAGGCGTT HAPS_1921 1886720 - 1887397 + | ISSst2, family IS1595 HAPS_1922 1887397 - 1887840 + | ATPase involved in DNA repair HAPS_1923 1888369 - 1887824 - | hypothetical protein TERM 2679 1888405 - 1888377 - R 91 -6.2 -5.64274 | opp_overlap 1888372 1888377 TTACTCATAAAAAAA TCCTGATAAA GTAGAATGA TTTATCAGGA TTTTAATTTATCAAG TERM 2680 1888377 - 1888405 + r 88 -8.3 -4.61873 | opp_overlap 1888377, overlap 1888372 TTACTCATAAAAAAA TCCTGATAAAGTA GAA TGATTTATCAGGA TTTTAATTTATCAAG trkG 1890005 - 1888539 - | trk-type K+ transport system, membrane component cof 1891345 - 1890500 - | putative haloacid dehalogenase-like hydrolase TERM 2681 1891513 - 1891478 - H 71 -8.7 -3.20491 | opp_overlap 1891478 1891482 1891484, overlap 1891477 1891484 TAATATAAAAAATAC TAAACATCATTTTTT GCTGAA AAAAAATGATATTTA TGCGTTATACATTAC TERM 2682 1891797 - 1891818 + H 100 -8.7 -5.626 | CACTATCCACACTTA GCCCGCA CGTCAAAA TGCGGGC TTTTTTTATCGAATA leuA 1891980 - 1893419 + | 2-isopropylmalate synthase pepT 1893503 - 1894753 + | peptidase T TERM 2683 1894964 - 1894927 - T 100 -17.3 -5.00884 | gap 1, opp_overlap 1894927 AGTGTTGGTAAAAAA GTGGGCT-AAAGCCTTAT AGT ACAAGGCTTTAAGCCCAC TTTTTGAAATGTGAA TERM 2684 1894927 - 1894964 + T 100 -15.1 -4.64766 | gap 1, opp_overlap 1894927 AGTGTTGGTAAAAAA GTGGGC-TAAAGCCTTAT AGT ACAAGGCTTTAAGCCCAC TTTTTGAAATGTGAA TERM 2685 1895618 - 1895605 - T 76 -2.4 -5.51046 | TAAATATAGAAAAAA CAAC AAATAG GTTG GAAGGCTTATTTAAA TERM 2686 1895778 - 1895813 + T 83 -7.1 -4.77165 | gap 1, opp_overlap 1895778 CACAATTTGTGTAAA TACCTGTTTCTGAGAT AATAC AT-TCAGACACAGGTA TTTTATTATGAACGA TERM 2687 1896174 - 1896191 + T 84 -4.9 -5.32944 | gap 1, opp_overlap 1896174 GGCTGGGAAGATAAC TG-GGCAA ATA TTGCCACA TTTTTTGATTATCCG TERM 2688 1896413 - 1896436 + T 71 -8.9 -3.18274 | ATTTATTATTGATTT TGGTGATCG CTTAGA CGATCACCG TTAAGTTGAAATGGG TERM 2689 1896723 - 1896742 + T 78 -6.4 -4.54477 | AATGCCACTTTATTT GCTGTTGG ATAA CCGATAGC TTTTGTCAATTTTGC TERM 2690 1897690 - 1897713 + T 86 -9.6 -4.30477 | opp_overlap 1897693, overlap 1897693 ATGTAAGTATAAGAA AAAGGACGCT CGAA AGCGTCCTTA TTTATCTATTCTTTA TERM 2691 1897693 - 1897710 + T 90 -11.3 -4.22858 | opp_overlap 1897693, overlap 1897690 TAAGTATAAGAAAAA GGACGCT CGAA AGCGTCC TTATTTATCTATTCT TERM 2692 1897710 - 1897693 - T 100 -11.3 -5.24416 | opp_overlap 1897693 1897690 TAAGTATAAGAAAAA GGACGCT CGAA AGCGTCC TTATTTATCTATTCT rplT 1898085 - 1897732 - | 50S ribosomal protein L20 rpmI 1898373 - 1898176 - | 50S ribosomal protein L35 infC 1898952 - 1898473 - | translation initiation factor IF-3 gcp 1899230 - 1900264 + | O-sialoglycoprotein endopeptidase aroE 1901368 - 1900553 - | shikimate 5-dehydrogenase TERM 2693 1901471 - 1901452 - R 100 -11.4 -5.42198 | opp_overlap 1901452 CGTGAAAAAACAAAA GCCCTGGG TTTC CCCAAGGC TTTCTTTTTGCATTA TERM 2694 1901452 - 1901471 + r 100 -9.2 -4.91473 | opp_overlap 1901452 CGTGAAAAAACAAAA GCCCTGGG TTTC CCCAAGGC TTTCTTTTTGCATTA rplS 1901861 - 1901502 - | 50S ribosomal protein L19 HAPS_1938 1903064 - 1901886 - | multidrug-efflux transporter mccB 1904097 - 1903057 - | UBA/THIF-type NAD/FAD binding protein, bacteriocin biosynthesis protein TERM 2695 1904138 - 1904122 - R 75 -7.3 -4.21974 | opp_overlap 1904122 1904120 CTACTATTTAAGAAA GAGCTAT TTA ATAGCCC TCTTTTATATTAAAA TERM 2696 1904348 - 1904328 - R 72 -7.7 -3.74047 | overlap 1904326 1904347 AAGTACTAACAAATA GATAGCTTT CTA AAAACTATC AAAACAAAAGCCTTG TERM 2697 1904388 - 1904347 - R 100 -13.9 -3.23708 | opp_overlap 1904358, overlap 1904328 1904326 1904348 1904358 GCTTTCTAAAAACTA TCAAAACAAAAGCCTTGGG TTTC CCCAAGGCTTTCTTTTTGC ATTAACGCATCAGCG TERM 2698 1904387 - 1904348 - R 100 -17.4 -2.53903 | opp_overlap 1904358, overlap 1904326 1904347 1904358 CTTTCTAAAAACTAT CAAAACAAAAGCCTTGGG TTTC CCCAAGGCTTTCTTTTTG CATTAACGCATCAGC TERM 2699 1904377 - 1904358 - R 100 -13.6 -5.14626 | opp_overlap 1904358, overlap 1904348 1904347 ACTATCAAAACAAAA GCCTTGGG TTTC CCCAAGGC TTTCTTTTTGCATTA TERM 2700 1904358 - 1904377 + r 100 -13.6 -4.91473 | opp_overlap 1904348 1904347 1904358 ACTATCAAAACAAAA GCCTTGGG TTTC CCCAAGGC TTTCTTTTTGCATTA rplS 1904757 - 1904407 - | 50S ribosomal protein L19 trmD 1905538 - 1904771 - | tRNA (guanine-N(1)-)-methyltransferase TERM 2701 1905384 - 1905396 + g 77 -4.8 -4.85822 | opp_overlap 1905382 1905381, overlap 1905382 CCACCACCATAAGGG CGGT CGTCC ACCG TTTTATGTTTGTCGT rimM 1906114 - 1905587 - | 16S rRNA-processing protein rpsP 1906390 - 1906142 - | 30S ribosomal protein S16 HAPS_1944 1906579 - 1906400 - | hypothetical protein TERM 2702 1906448 - 1906430 - G 79 -3.1 -5.45813 | overlap 1906431 TAGTAAAAAAGAAAA CCCTC GTTCGAGGT GAGGG TGCGAAACTTGTTCA TERM 2703 1906712 - 1906737 + r 100 -13.5 -3.90318 | opp_overlap 1906712, overlap 1906700 AACGTTATTTAAAAA GTAGCTTAGTT ATAA AACTAAGCTAC TTTCTCAAATACTCA TERM 2704 1906737 - 1906712 - R 100 -13.5 -4.67011 | opp_overlap 1906700 1906712 AACGTTATTTAAAAA GTAGCTTAGTT ATAA AACTAAGCTAC TTTCTCAAATACTCA nhaC 1908125 - 1906734 - | Na+/H+ antiporter TERM 2705 1908341 - 1908314 - R 100 -11.5 -5.86976 | opp_overlap 1908314 TTATAAAATAAAAAA TACCTGTATCT CGTTTT AGATACAGGTA TTTTTTACATCTCAA TERM 2706 1908314 - 1908341 + r 100 -11.5 -5.1287 | opp_overlap 1908314 TTATAAAATAAAAAA TACCTGTATCT CGTTTT AGATACAGGTA TTTTTTACATCTCAA HAPS_1946 1908739 - 1908365 - | hypothetical protein HAPS_1947 1908836 - 1908693 - | hypothetical protein TERM 2707 1908742 - 1908764 + gH 81 -5.7 -5.01811 | gap 1, opp_overlap 1908742 ACCGCAACCCCAAAA GCGAG-ATAA TTTC TTATTCTCGC TTTTTCATTTAATGA HAPS_1948 1908928 - 1909131 + | hypothetical protein TERM 2708 1909173 - 1909150 - f 71 -8.9 -3.18274 | CCCATTTCAACTTAA CGGTGATCG TCTAAG CGATCACCA AAATCAATCATAAAT TERM 2709 1909412 - 1909395 - f 84 -4.9 -5.32944 | gap 1, opp_overlap 1909395 CGGATAATCAAAAAA TGTGGCAA TAT TTGCC-CA GTTATCTTCCCAGCC TERM 2710 1909635 - 1909649 + F 86 -10 -4.1196 | ATAGACTGCATTGAT GGCTTC CGG GAAGCC TTTTAAACCTCGATT TERM 2711 1909937 - 1909964 + F 74 -4.2 -4.90869 | gap 1 TTTTTAGATTTTTGG CAAATTC-CGCTT CCA AGGCGTGAAGTTG TTTTTCGTTCATAAT TERM 2712 1910019 - 1909984 - f 83 -7.1 -4.77165 | gap 1, opp_overlap 1909984 TCGTTCATAATAAAA TACCTGTGTCTGA-AT GTATT ATCTCAGAAACAGGTA TTTACACAAATTGTG TERM 2713 1910858 - 1910883 + G 70 -3.5 -5.00642 | opp_overlap 1910873, overlap 1910862 1910865 GACATTGTTATGCTT TAAGTAATTTA AGAA TAAATTGTTTA TTTTTATATCAATTA hsdS 1910131 - 1911129 + | type I site-specific deoxyribonuclease S subunit, restriction modification system TERM 2714 1911865 - 1911875 + G 70 -2.6 -5.08824 | opp_overlap 1911864, overlap 1911864 TCTTTATTAAAGTAT TTTT ATA AAAA TTTTTTAAATGAGAA TERM 2715 1912085 - 1912073 - g 71 -4.9 -4.55849 | overlap 1912063 CAAAATTTAAAGAAA TCTTT TTT AAAGA GATTACAAAGTTATT TERM 2716 1913323 - 1913308 - g 74 -4.8 -4.70117 | AATTTAACAAACAAA CAAATT GGAA AATTTG CAGAAAGTGCTTATT tir 1911148 - 1913706 + | Toll-interleukin receptor TERM 2717 1914745 - 1914720 - f 70 -6.8 -4.08164 | AAAAGGGGAGAGAAA CGGTGGCGTG ATTTGG CACACCACAG GTTCGGGCAAGTCGT TERM 2718 1917063 - 1917048 - g 70 -5.4 -4.3453 | AATGCCAAATATAAA CGGCTA CGCC TAACCG TGCAACCCACGGGCG HAPS_1953 1916967 - 1917680 + | putative metal-dependent hydrolase TERM 2719 1918342 - 1918368 + G 72 -4.5 -4.77986 | gap 1, opp_overlap 1918342, overlap 1918344 CGAAATTCTAAAGCA GTCGGATATTGT GGTA ACAA-ATCCGCC TTTTTCCCTATTTCG ecoRIM 1917971 - 1918942 + | modification methylase (adenine-specificmethyltransferase) hnh 1918974 - 1920086 + | HNH endonuclease TERM 2720 1920156 - 1920128 - T 72 -7.5 -3.68023 | overlap 1920129 1920132 AATTTGCAAAACCAA CTTAGGGACAAAT CAC ATTTGCCCCAAAA ATCAAGCGGTCAATT TERM 2721 1920152 - 1920132 - T 76 -10.5 -2.66118 | overlap 1920129 1920128 TGCAAAACCAACTTA GGGACAAAT CAC ATTTGCCCC AAAAATCAAGCGGTC TERM 2722 1920205 - 1920158 - T 100 -16.6 -4.57073 | opp_overlap 1920162, overlap 1920162 CATTTGCCCCAAAAA TCAAGCGGTCAATTTCTTGCAA TAAA TTGCAAAAAATTGACCGCTTTC AATCAGCCGTTAATC TERM 2723 1920201 - 1920162 - T 100 -21.8 -3.80855 | opp_overlap 1920162, overlap 1920158 TGCCCCAAAAATCAA GCGGTCAATTTCTTGCAA TAAA TTGCAAAAAATTGACCGC TTTCAATCAGCCGTT TERM 2724 1920162 - 1920201 + T 100 -19.6 -3.65199 | opp_overlap 1920162 1920158 TGCCCCAAAAATCAA GCGGTCAATTTCTTGCAA TAAA TTGCAAAAAATTGACCGC TTTCAATCAGCCGTT bcgIB 1921278 - 1920208 - | type IIS restriction enzyme protein TERM 2725 1921001 - 1921024 + g 88 -11.2 -3.57651 | opp_overlap 1921007, overlap 1921007 CTTAAACTAACTCTT TGTAAAGGTT TTAA AACCTTTACA TTGTCTAATATGGAA TERM 2726 1921416 - 1921443 + r 100 -9.8 -5.14477 | TGGTTTGGTATCTAT CGGTGCGGTTTG GTTC CAGTCTGCACCG TTTTTTGGGTCTATG TERM 2727 1921640 - 1921652 + r 76 -6.3 -4.57569 | overlap 1921639 TGAATTTTACCATTT CATCA GCA TGATG TTTTTCACCCACTCA asnA 1923951 - 1922959 - | asparagine synthetase AsnA asnC 1924128 - 1924619 + | DNA-binding transcriptional regulator AsnC TERM 2728 1924665 - 1924699 + F 71 -8.7 -3.23009 | overlap 1924666 AAAAAAGATCGCAAT TCTGACCGCTTGATT GGTAG AATGAAGCGGTTAGG TTACTCGAATTTTTC TERM 2729 1924666 - 1924698 + F 73 -10 -2.53082 | overlap 1924665 AAAAAGATCGCAATT CTGACCGCTTGATT GGTAG AATGAAGCGGTTAG GTTACTCGAATTTTT udp 1924731 - 1925498 + | uridine phosphorylase TERM 2730 1925506 - 1925538 + F 100 -9.2 -4.84017 | overlap 1925507 ATAAATAAAATGTTG ATGAGGCAGTGTGA ATATC TCAGACTGCCTCAG TTTTTATAAGGGATT TERM 2731 1925507 - 1925537 + F 95 -12.7 -3.49687 | overlap 1925506 TAAATAAAATGTTGA TGAGGCAGTGTGA ATATC TCAGACTGCCTCA GTTTTTATAAGGGAT HAPS_1962 1925672 - 1926001 + | hypothetical protein TERM 2732 1926007 - 1926030 + F 100 -8.2 -5.48514 | overlap 1926017 AGCAGAATAATGTGT GGGAAGGCTT GAAA AAGCCTTTTC TTTTTCTTTCTTGAT trmA2 1926054 - 1927163 + | tRNA (uracil-5-)-methyltransferase TERM 2733 1927366 - 1927341 - f 86 -10.5 -3.69482 | opp_overlap 1927341 CCACTGAATATACAA CCTGTTGGTAA GTAA TTACCAGCAGG TTTTCTCTCTCAAGA TERM 2734 1927341 - 1927366 + F 100 -12.7 -4.60797 | opp_overlap 1927341 CCACTGAATATACAA CCTGTTGGTAA GTAA TTACCAGCAGG TTTTCTCTCTCAAGA TERM 2735 1927722 - 1927741 + F 81 -2.8 -5.77677 | overlap 1927723 TTTAGAATGAGTTAG TCCTTTCG TCTG TGAAAGGC TTTTTTATTGTTTTA rpsL 1927778 - 1928152 + | 30S ribosomal protein S12 rpsG 1928282 - 1928752 + | 30S ribosomal protein S7 TERM 2736 1928770 - 1928802 + F 100 -16.5 -3.32022 | AGCTTTTGATGTTTG TAGGCTTCATCTCAA AAT TTGTGATGAAGCCTA TTACTATATAAACAA TERM 2737 1930201 - 1930167 - g 77 -8.7 -3.84406 | gap 1, overlap 1930164 CGTTTAGCACAAGAA GACCCTTCATTCCGTG TTCA CACCGA-TGAAGAGTC AGGCGAAACCATCAT TERM 2738 1930377 - 1930395 + G 71 -7.4 -3.82592 | AAACAATCAGGTGGT CGTGGTCA ATA TGGTCACG TTGTTATCGACTTAT fusA 1928850 - 1930952 + | elongation factor G TERM 2739 1930968 - 1930994 + F 78 -8.7 -3.72576 | opp_overlap 1930968 1930969, overlap 1930969 TTTTTAACTTACAAA CTCCGTAGCAC ATATC GTGCTACGGGA TTTCATCAACAAAGG TERM 2740 1930993 - 1930968 - f 88 -10.5 -3.97368 | gap 1, opp_overlap 1930968 1930969, overlap 1930969 TTTTTAACTTACAAA CTCCGTAGCACA TAT CGTGCTACGG-G ATTTCATCAACAAAG TERM 2741 1930969 - 1930993 + F 84 -12.2 -2.83403 | opp_overlap 1930968 1930969, overlap 1930968 TTTTAACTTACAAAC TCCGTAGCAC ATATC GTGCTACGGG ATTTCATCAACAAAG TERM 2742 1930993 - 1930969 - f 78 -10.7 -2.981 | opp_overlap 1930969 1930968, overlap 1930968 TTTTAACTTACAAAC TCCGTAGCACA TAT CGTGCTACGGG ATTTCATCAACAAAG tuf 1931020 - 1932207 + | elongation factor Tu TERM 2743 1932246 - 1932278 + T 100 -15 -4.97158 | AGATTGTTATCTTAA GGGCTGGATGCGAT ATTTA ATCGTATTCAGCCC TTTTATTTGGTGTAA TERM 2744 1932343 - 1932381 + T 74 -2.6 -5.27335 | opp_overlap 1932343 1932345, overlap 1932345 ACCAAGTGGACAAAA CAGTTGCTAATATCTA TTTTCTC TAAATGTTAGCAACTC TTTTTATTTAAAAAA TERM 2745 1933348 - 1933313 - T 100 -15 -5.1925 | gap 1, opp_overlap 1933313 TCACAATTCAAAAAA GTGGCTTAAAGCCCGTA ATA TA-AGGCTTTAAGCCAC TTTTTAGCAATTATT TERM 2746 1933313 - 1933348 + T 100 -13.5 -4.64144 | opp_overlap 1933313 TCACAATTCAAAAAA GTGGCTTAAAGCC CGTAATATAA GGCTTTAAGCCAC TTTTTAGCAATTATT rlmB 1934172 - 1933438 - | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 2747 1933745 - 1933722 - G 70 -8.1 -3.65046 | TCGTTACTCGAATAA GTGGCACGG TTTCCG CCGCACCAC AAGCCACTTTGCGAG TERM 2748 1934229 - 1934287 + r 100 -30.9 -2.52464 | gap 2, opp_overlap 1934237, overlap 1934237 CTTCGTGTTTTAAGG --CTGCCAAATCTCCCCTAACCCCTCTTT AGC AAAGAGGGGTTAGGGGAGATTTGGCAGAA TAAATTCACGAAGAA TERM 2749 1934237 - 1934277 + r 100 -30.1 -3.54543 | opp_overlap 1934237, overlap 1934229 TTTAAGGCTGCCAAA TCTCCCCTAACCCCTCTTT AGC AAAGAGGGGTTAGGGGAGA TTTGGCAGAATAAAT TERM 2750 1934277 - 1934237 - R 100 -30.1 -3.55622 | opp_overlap 1934237 1934229 TTTAAGGCTGCCAAA TCTCCCCTAACCCCTCTTT AGC AAAGAGGGGTTAGGGGAGA TTTGGCAGAATAAAT prfC 1935899 - 1934310 - | peptide chain release factor 3 apaH 1936716 - 1936027 - | diadenosine tetraphosphatase nadR 1937984 - 1936713 - | nicotinamide-nucleotide adenylyltransferase fdx 1938239 - 1938424 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein hemG 1938946 - 1938419 - | protoporphyrinogen oxidase TERM 2751 1939251 - 1939264 + G 73 -6.7 -4.1891 | opp_overlap 1939250 AGAGCAACAGCAAGC CCCAA TTCA TTGGG TTTCTATTGAGCAAA napA 1939123 - 1939842 + | acid phosphatase/phosphotransferase TERM 2752 1939872 - 1939847 - f 78 -7.5 -4.26871 | opp_overlap 1939849 1939866, overlap 1939849 CAAGCTACTAATAAA TATCCCCGTCT TAAA AGGCGGGGATT TGTTATTCCCTTATA TERM 2753 1939849 - 1939870 + F 100 -12.3 -4.4846 | opp_overlap 1939849 1939847, overlap 1939866 AGCTACTAATAAATA TCCCCGTCT TAAA AGGCGGGGA TTTGTTATTCCCTTA TERM 2754 1939870 - 1939849 - f 84 -10.1 -3.72775 | opp_overlap 1939849 1939866, overlap 1939847 AGCTACTAATAAATA TCCCCGTCT TAAA AGGCGGGGA TTTGTTATTCCCTTA TERM 2755 1940452 - 1940424 - g 70 -9.6 -2.57211 | opp_overlap 1940424 1940418, overlap 1940423 1940431 ACTGTGGTCTAGAAG CGGTAAACCGCA TTGAG CGCGGTTTAACG TACTATTTCGAGTTT TERM 2756 1942204 - 1942231 + G 72 -9.1 -3.37344 | opp_overlap 1942203 1942204 TCACGGCGAAGCAAT GGCAATGGGCG AACGTG CGCCAGTTGCC TTACTTGACTGCAGC TERM 2757 1942506 - 1942496 - g 84 -8.2 -4.73388 | AATGGTGAGCAAAAA GCGG TTA CCGC TCCACTTTCTCTCGT purL 1940117 - 1944013 + | phosphoribosylformylglycinamidine synthase HAPS_1979 1944076 - 1944465 + | hypothetical protein TERM 2758 1944631 - 1944594 - f 85 -9.3 -4.1196 | gap 1, opp_overlap 1944594 1944596 1944597 AATCTACTGCTAAAA GTG-GCTTAAAGCCTCAT AGT ACAAGGCTTTAAGCTCTC TTTTTGAAACATGAA TERM 2759 1944594 - 1944631 + F 71 -5 -4.58395 | gap 1, opp_overlap 1944594, overlap 1944596 1944597 AATCTACTGCTAAAA GTG-GCTTAAAGCCT CATAGTACA AGGCTTTAAGCTCTC TTTTTGAAACATGAA TERM 2760 1944597 - 1944627 + F 80 -9.9 -3.53855 | opp_overlap 1944594, overlap 1944596 1944594 CTACTGCTAAAAGTG GCTTAAAGCCT CATAGTACA AGGCTTTAAGC TCTCTTTTTGAAACA HAPS_1980 1944922 - 1945569 + | hypothetical protein lapB 1946566 - 1945679 - | arginine ABC superfamily ATP binding cassette transporter, membrane protein TERM 2761 1946007 - 1946017 + g 73 -2.4 -5.32565 | opp_overlap 1945997 1945995 AAATAGGCTGGACGA AGCC CAT GGCA TTTTTTAGTTAGTTG TERM 2762 1946622 - 1946595 - R 77 -9.9 -3.12895 | opp_overlap 1946594, overlap 1946593 TTCGTGACTAATAGA GCCGTTGGAGA ATATCA CCTCCAACGAC AGTTATTACTATATT valS 1949335 - 1946636 - | valyl-tRNA synthetase TERM 2763 1947040 - 1947025 - G 70 -9 -3.14998 | overlap 1947024 TACGCACTAAGAAAT CCAAGC CTTT GCTTGG GGCGATGTTGCACTC TERM 2764 1948894 - 1948909 + g 72 -4.6 -4.68655 | overlap 1948896 AGCGGAAATGCCATA GCGAGC CTTT GCTCTC TTTATTTTCCACTTC hindIIIM 1950431 - 1949436 - | Modification methylase HindIII (M.HindIII) TERM 2765 1949562 - 1949572 + g 70 -2.6 -5.03284 | TAAGCGTTTAACTGC TATA TCA TATA TTTCTTTATTTTTTT TERM 2766 1951194 - 1951177 - R 70 -8.5 -3.38207 | opp_overlap 1951177 CAGGTAATATACCAA TAGCTCT TACA AGAGCTA TTAACTGATTTTTGT TERM 2767 1951367 - 1951349 - R 77 -8.2 -3.94811 | overlap 1951352 AACATTATGTATAAA TAAGCTAC ACT GTAGCTCA AATCAAAGTCCTGAA TERM 2768 1951364 - 1951352 - R 76 -7.7 -4.09519 | overlap 1951349 ATTATGTATAAATAA GCTAC ACT GTAGC TCAAATCAAAGTCCT TERM 2769 1951387 - 1951375 - R 76 -7.7 -4.07246 | opp_overlap 1951375 GTAGCTCAAATCAAA GTCCT GAA AGGAC TAACTTATGCTTGAT HAPS_1985 1951829 - 1951659 - | hypothetical protein fic 1952574 - 1951816 - | filamentation induced by cAMP protein Fic TERM 2770 1953059 - 1953079 + r 72 -8.3 -3.5394 | overlap 1953060 TTTCCATATCTGCAA CTTGGGGAA GTT TTCCCCAAA TTTCAAAGCCCATTT TERM 2771 1953060 - 1953078 + r 81 -11.8 -2.72043 | overlap 1953059 TTCCATATCTGCAAC TTGGGGAA GTT TTCCCCAA ATTTCAAAGCCCATT TERM 2772 1953332 - 1953364 + r 95 -11.4 -4.46404 | ACTGATTTAGTTCAA GGACTGAGTTCTGT ATTCC ACAGGGCTTAGTCC TTTTAATCTTACTTG HAPS_1990 1954343 - 1954212 - | hypothetical protein TERM 2773 1954828 - 1954849 + r 100 -10.2 -5.60556 | opp_overlap 1954828 GACAGTAGGATGACA GGGCGAAA GAAGTA TTTCGCCC TTTTTATTTTATATT TERM 2774 1954849 - 1954828 - R 75 -10.2 -2.84192 | opp_overlap 1954828 GACAGTAGGATGACA GGGCGAAA GAAGTA TTTCGCCC TTTTTATTTTATATT trpA 1955695 - 1954871 - | tryptophan synthase subunit alpha trpB 1956888 - 1955692 - | tryptophan synthase subunit beta TERM 2775 1955767 - 1955783 + g 85 -6.6 -5.12971 | ACGACCGGATAGATT CACAAC AAGTA GTTGTG TTTTTGTTGGATCTT trpC 1958377 - 1956908 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase trpD 1959391 - 1958390 - | anthranilate phosphoribosyltransferase trpG 1959992 - 1959393 - | anthranilate synthase component II TERM 2776 1959519 - 1959496 - G 71 -6.1 -4.28774 | overlap 1959514 GGATGGAATTGAAAA CCACAAATC GGTAAA GATTTATGG CGAATTGCCATGACG TERM 2777 1959757 - 1959767 + g 71 -6.8 -4.07687 | opp_overlap 1959752 1959757 CAAATACCAATCATA GGCA CTT TGCC TTTTAAGCGCGCAAT TERM 2778 1959994 - 1959980 - G 78 -2.8 -5.49729 | AATTATCTAAAAAAA TAATGG TTG CCATAA TAAAAAATCCTTATA trpE 1961546 - 1960005 - | anthranilate synthase component I HAPS_1998 1963374 - 1961857 - | sulfatase/phosphoglycerol transferase TERM 2779 1963529 - 1963561 + r 91 -11.4 -3.78902 | ACTGATTTAGTTCAA GGACTGAGTTCTGT ATTCC ACAGGGCTTAGTCC TTTCAATCTTACTTG TERM 2780 1964079 - 1964032 - R 73 -2.1 -5.28176 | gap 1 TTTAGCCATAAAAAA TCTGCACCTTAATTAGTTGG TTGTTTAGT CCAACTT-TTGGGGTGCAGA TCAAAGGGGGGAACA rluB 1965115 - 1964096 - | ribosomal large subunit pseudouridine synthase B TERM 2781 1965188 - 1965167 - R 100 -15.9 -2.80816 | GTGTTATTTACTATA CTTCCCCCG CTTA CGGGGGAAG GTGCCCGAAGGGCGG TERM 2782 1965230 - 1965246 + r 76 -6.6 -4.38154 | TATAAGCCCTCTCCC TCCGAA AACCC TTCGGA TTTTCTCCACCCTCT sua5 1965903 - 1965283 - | putative translation factor (SUA5) TERM 2783 1966091 - 1966124 + r 70 -8.9 -3.03012 | AAATCAATATGTTAC GTTTATATGGTGGGT CAAG ACCCACCCTACAAGC TACTTTGTCAATAAT sufE 1967504 - 1967115 - | SufE protein probably involved in Fe-S center assembly TERM 2784 1967893 - 1967907 + G 73 -2.1 -5.18726 | TGTATGGGGCAAGCC TGTTC AATGG GAGCA TTTTTATTATCCGCA clpP 1967605 - 1968186 + | ATP-dependent Clp protease proteolytic subunit ClpP TERM 2785 1968827 - 1968845 + G 72 -10.4 -2.60075 | overlap 1968826 TATCAGGGGAAGGGG TTCAGCAA GCG TTGCTGAA ATTGATTGAAGGCAC TERM 2786 1969302 - 1969291 - g 73 -5.8 -4.58395 | opp_overlap 1969280 GCGATTGCTCAAAAA GCGA TTTC TCGC AAAACAGGGGCAAGG clpX 1968193 - 1969443 + | ATP-dependent protease ATP-binding subunit TERM 2787 1969458 - 1969478 + T 100 -8.9 -4.7254 | overlap 1969460 ACTTAATTGATATTC TCCCCGTCC TAA GGGCGGGAA TTTTTACTAGAAACT TERM 2788 1969460 - 1969476 + T 81 -11.5 -2.65504 | overlap 1969458 TTAATTGATATTCTC CCCGTCC TAA GGGCGGG AATTTTTACTAGAAA dapE 1970650 - 1969517 - | succinyl-diaminopimelate desuccinylase pilD 1971402 - 1970734 - | Tfp pilus assembly pathway, fimbrial leader peptidase PilD pilC 1972595 - 1971399 - | Tfp pilus assembly pathway, component PilC pilB 1973973 - 1972588 - | Tfp pilus assembly pathway, ATPase PilB TERM 2789 1974150 - 1974173 + r 90 -12.4 -3.54307 | overlap 1974151 1974172 TCACTGCGCTCGGGG ACTTCCCCCG CAAG CGGGGGAAGA TTTAAAACAAATCTT TERM 2790 1974151 - 1974172 + r 100 -15.9 -2.72263 | overlap 1974150 CACTGCGCTCGGGGA CTTCCCCCG CAAG CGGGGGAAG ATTTAAAACAAATCT TERM 2791 1974239 - 1974214 - R 74 -7.5 -3.85817 | overlap 1974215 ACTCTTCCCCACAAA TTCTTCCCCCA TTTA TGGGGGAAGTC CCCGAGCGCAGTGAG TERM 2792 1974238 - 1974215 - R 79 -11 -2.91276 | overlap 1974214 CTCTTCCCCACAAAT TCTTCCCCCA TTTA TGGGGGAAGT CCCCGAGCGCAGTGA HAPS_2012 1974691 - 1974326 - | DNA methyltransferase TERM 2793 1974769 - 1974792 + r 75 -8.8 -3.61922 | overlap 1974770 1974791 TCGCTGCGCTCGGGG ACTTCCTCCG CAGG CGGGGGAAGA TTTAAAATAAATCTT TERM 2794 1974770 - 1974791 + r 84 -12.3 -2.76671 | overlap 1974769 CGCTGCGCTCGGGGA CTTCCTCCG CAGG CGGGGGAAG ATTTAAAATAAATCT TERM 2795 1974791 - 1974805 + r 73 -5.8 -4.42653 | opp_overlap 1974793, overlap 1974769 CCGCAGGCGGGGGAA GATTTA AAA TAAATC TTTTCTCCATAAACT TERM 2796 1974858 - 1974833 - R 74 -7.5 -3.85817 | overlap 1974834 ACTCTTCCCCACAAA TTCTTCCCCCA TTTA TGGGGGAAGTC CCCGAGCGCAGCGAG TERM 2797 1974857 - 1974834 - R 79 -11 -2.91276 | overlap 1974833 CTCTTCCCCACAAAT TCTTCCCCCA TTTA TGGGGGAAGT CCCCGAGCGCAGCGA TERM 2798 1974931 - 1974956 + r 76 -4.8 -4.99435 | gap 1, opp_overlap 1974933 AAGACATCATTTACA TACTTC-CCCT ACTCA GGGGAGAAGTA TTTTTGATTATTGCC pilA 1975416 - 1974964 - | Tfp pilus assembly protein, major pilin PilA TERM 2799 1975499 - 1975528 + H 74 -3 -5.29782 | overlap 1975500 1975502 TGCGACGAGCAACAT TTATTTTTTCGA CGTAGA TCGAAAAAATCG TTTTTTCTCCCTGTG radA 1975604 - 1976980 + | DNA repair protein RadA gmk 1977659 - 1977033 - | guanylate kinase HAPS_2016 1978699 - 1977728 - | ISNme5, family IS110 TERM 2800 1977857 - 1977886 + g 88 -11.5 -3.53761 | opp_overlap 1977885 GACTTTCTTCGCTTT GCCTTTTGCAACC AATC GGGTGTAAAAGGC TTTAAAAACAGGTTC HAPS_2017 1978828 - 1978953 + | hypothetical protein rep 1978950 - 1980971 + | ATP-dependent DNA helicase HAPS_2019 1981819 - 1980983 - | hypothetical protein TERM 2801 1984034 - 1984058 + r 77 -10 -3.2661 | opp_overlap 1984021 1984025 AATGTACCGGCAGGT TCACCGCAAG AGAAA CCTGCGGTGA TTAAATATTATTTCC TERM 2802 1987494 - 1987511 + r 70 -9.1 -3.07291 | opp_overlap 1987494 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 2803 1988064 - 1988039 - R 73 -3.3 -5.15167 | opp_overlap 1988040, overlap 1988040 GAGTAGTAAGAAAAA TCTTGACTG AACAAAAG CAGTCAAGT GTTTAGTAGTTAATA TERM 2804 1988424 - 1988409 - R 76 -7.6 -4.00323 | GCAAAGACAGAAGAA TTGGCT GGGA AGCCAA GCGACACAGGGTGAT TERM 2805 1989522 - 1989508 - R 73 -5.7 -4.58213 | TAAGTAACGATAAAA CGAGT GAAAA ACTCG TTCGCCGGAAGACCA TERM 2806 1991494 - 1991517 + r 100 -9.6 -5.2197 | opp_overlap 1991494 TATTAAAGAGAAGAA CCGCAGGTTA GAGA TAGCTTGCGG TTTTTGCTTTTTGTA TERM 2807 1992082 - 1992043 - R 83 -5.8 -5.07567 | gap 1, opp_overlap 1992045 1992045 1992046, overlap 1992045 1992046 TCATATTTCAAAAAA GAG-GGCTTAAAGCCTTGT GCT ATAAGGCTTTGAGCCACTT TTTAGCAACTATTTT TERM 2808 1992079 - 1992045 - R 81 -8.6 -4.16351 | opp_overlap 1992045 1992045 1992046, overlap 1992043 1992046 ATATTTCAAAAAAGA GGGCTTAAAGCCTTGT GCT ATAAGGCTTTGAGCCA CTTTTTAGCAACTAT TERM 2809 1992045 - 1992079 + r 93 -13 -3.34984 | opp_overlap 1992045 1992043 1992046, overlap 1992045 1992046 ATATTTCAAAAAAGA GGGCTTAAAGCCTTGT GCT ATAAGGCTTTGAGCCA CTTTTTAGCAACTAT TERM 2810 1992045 - 1992080 + r 100 -12.8 -4.59511 | gap 1, opp_overlap 1992045 1992043 1992046, overlap 1992045 1992046 ATATTTCAAAAAAGA G-GGCTTAAAGCCTTGT GCT ATAAGGCTTTGAGCCAC TTTTTAGCAACTATT TERM 2811 1992046 - 1992078 + r 100 -16.5 -2.60508 | opp_overlap 1992046 1992045 1992043, overlap 1992045 1992045 TATTTCAAAAAAGAG GGCTTAAAGCCTTGT GCT ATAAGGCTTTGAGCC ACTTTTTAGCAACTA TERM 2812 1992078 - 1992046 - R 85 -12.1 -3.08726 | opp_overlap 1992045 1992045 1992046, overlap 1992045 1992043 TATTTCAAAAAAGAG GGCTTAAAGCCTTGT GCT ATAAGGCTTTGAGCC ACTTTTTAGCAACTA yibK 1992595 - 1992116 - | putative tRNA/rRNA methyltransferase HAPS_2029 1994776 - 1992599 - | 23S rRNA m(2)G2445 methyltransferase TERM 2813 1994016 - 1994038 + g 79 -9.8 -3.78329 | overlap 1993977 GAGGTGCCGAAGGCG GAGGGGGGTA GGA TTTCCCCCTC TTTCGCTTCCTGCCA rsmC 1995867 - 1994926 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 2814 1994990 - 1994975 - G 90 -7.6 -5.1925 | GGATAAGGTAAAAAA GCATTG GCAA CAATGC GTAGCTCACCACCAC TERM 2815 1996269 - 1996226 - g 95 -13.4 -3.6849 | overlap 1996229 1996258 ATTCAACCTGAAGAA CAAGCGGTACAATTTACAAA AAAA TTTGCAAATCAGACCGCTTG GCAGTGTGAGTCTTG TERM 2816 1996266 - 1996229 - g 83 -9.3 -3.97139 | overlap 1996226 1996258 CAACCTGAAGAACAA GCGGTACAATTTACAAA AAAA TTTGCAAATCAGACCGC TTGGCAGTGTGAGTC holD 1995950 - 1996363 + | DNA polymerase III subunit psi HAPS_2032 1996365 - 1996805 + | metallopeptidase peptidase rimI 1997047 - 1997484 + | ribosomal-protein-alanine N-acetyltransferase TERM 2817 1997550 - 1997515 - f 76 -4.2 -5.1963 | gap 1, opp_overlap 1997516, overlap 1997516 GCCAAGTAACAAAAA TGGATTTTGTG-TAACT TAT AACTATCACAAAATCCT TTTTCTGTTTATAAT TERM 2818 1997516 - 1997549 + F 74 -3.9 -5.24799 | opp_overlap 1997515 1997516 CCAAGTAACAAAAAT GGATTTTGTGTAACT TATA ACTATCACAAAATCC TTTTTCTGTTTATAA TERM 2819 1997549 - 1997516 - f 72 -7.7 -3.70694 | gap 1, opp_overlap 1997516, overlap 1997515 CCAAGTAACAAAAAT GGATTTTGTG-TAACT TAT AACTATCACAAAATCC TTTTTCTGTTTATAA hipA 1997596 - 1998939 + | HipA domain-containing protein HAPS_2035 1998939 - 1999283 + | XRE family transcriptional regulator srmB 1999312 - 2000637 + | ATP-dependent RNA helicase SrmB lolB 2000758 - 2001390 + | outer membrane lipoprotein LolB ispE 2001392 - 2002237 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase prsA 2002265 - 2003215 + | ribose-phosphate pyrophosphokinase TERM 2820 2003247 - 2003216 - f 80 -11 -3.18383 | opp_overlap 2003216 2003223, overlap 2003222 2003223 ATGTTCAGCCATTAA TCAAAAGCCCAATC GAAA GACTGGGTTTTTGA TTTCTAATGTATGGC TERM 2821 2003216 - 2003247 + F 89 -11 -4.04318 | opp_overlap 2003216 2003222 2003223, overlap 2003223 ATGTTCAGCCATTAA TCAAAAGCCCAATC GAAA GACTGGGTTTTTGA TTTCTAATGTATGGC TERM 2822 2003223 - 2003240 + F 78 -5.5 -5.05505 | opp_overlap 2003222 2003216 2003223, overlap 2003216 GCCATTAATCAAAAG CCCAATC GAAA GACTGGG TTTTTGATTTCTAAT TERM 2823 2003313 - 2003288 - f 72 -7.5 -3.79902 | opp_overlap 2003290 2003305, overlap 2003289 AGAAAGCAAAATTAA TTCTTCCCCCA TAAA TGGGGGAAGTC CCTTCGTGAAGCGAA TERM 2824 2003312 - 2003289 - f 79 -11 -2.86315 | opp_overlap 2003290 2003305, overlap 2003288 GAAAGCAAAATTAAT TCTTCCCCCA TAAA TGGGGGAAGT CCCTTCGTGAAGCGA TERM 2825 2003290 - 2003311 + F 93 -14.5 -2.56596 | opp_overlap 2003289 2003288, overlap 2003305 AAAGCAAAATTAATT CTTCCCCCA TAAA TGGGGGAAG TCCCTTCGTGAAGCG TERM 2826 2003380 - 2003405 + F 74 -4.6 -4.90778 | overlap 2003381 2003382 ATCCGCCCTTCGGGC ACCTTCCCCC ACAAGC GGGGGAAGAA TTTTCTTTCCCTCAA TERM 2827 2003381 - 2003404 + F 72 -8.1 -3.53744 | overlap 2003380 2003382 TCCGCCCTTCGGGCA CCTTCCCCC ACAAGC GGGGGAAGA ATTTTCTTTCCCTCA TERM 2828 2003382 - 2003403 + F 81 -11.6 -2.71523 | overlap 2003381 2003380 CCGCCCTTCGGGCAC CTTCCCCC ACAAGC GGGGGAAG AATTTTCTTTCCCTC TERM 2829 2003408 - 2003432 + F 72 -8 -3.74916 | gap 1, opp_overlap 2003407 AGCGGGGGAAGAATT TTCTTTCCCTC AAGC GAGGG-AAGAA TTGTAATTTTATATT pyrD 2003458 - 2004465 + | dihydroorotate dehydrogenase 2 TERM 2830 2004512 - 2004537 + T 83 -8.9 -4.30014 | overlap 2004513 2004514 2004516 2004527 2004529 ATCCGCCCTTCGGGC ACCTTCCCCCG CAAG CGGGGGAAGAA TTTTAAATTCCTCCC TERM 2831 2004513 - 2004536 + T 87 -12.4 -3.17526 | overlap 2004512 2004514 2004516 2004527 2004529 TCCGCCCTTCGGGCA CCTTCCCCCG CAAG CGGGGGAAGA ATTTTAAATTCCTCC TERM 2832 2004514 - 2004535 + T 100 -15.9 -2.50034 | overlap 2004513 2004512 2004516 2004527 2004529 CCGCCCTTCGGGCAC CTTCCCCCG CAAG CGGGGGAAG AATTTTAAATTCCTC TERM 2833 2004516 - 2004566 + T 100 -14.8 -2.9627 | overlap 2004514 2004513 2004512 2004527 2004529 2004562 GCCCTTCGGGCACCT TCCCCCGCAAGCGGGGGAAGAATT TTA AATTCCTCCCCTATTTATGGGGGA TGTCTCCTCGCTTGC TERM 2834 2004529 - 2004553 + T 87 -11.5 -3.5241 | overlap 2004514 2004513 2004512 2004527 2004516 CTTCCCCCGCAAGCG GGGGAAGAATT TTA AATTCCTCCCC TATTTATGGGGGATG TERM 2835 2004583 - 2004607 + T 78 -9.3 -3.5241 | overlap 2004581 2004603 GTCTCCTCGCTTGCG GGGGAAGGATT TTA AATTCCTCCCC TATTTATGGGGGATG TERM 2836 2004635 - 2004663 + T 95 -12.5 -3.86015 | opp_overlap 2004653 2004654, overlap 2004636 ATGTCTCCTCGCTTG CGGGGGAAGGATT TTA AATTCTTCCCCCA TTTATGGGGGAAGTC TERM 2837 2004636 - 2004662 + T 100 -16 -2.91395 | opp_overlap 2004653 2004654, overlap 2004635 TGTCTCCTCGCTTGC GGGGGAAGGATT TTA AATTCTTCCCCC ATTTATGGGGGAAGT TERM 2838 2004677 - 2004654 - T 79 -11 -2.78015 | opp_overlap 2004636 2004635, overlap 2004653 GGAAGGATTTTAAAT TCTTCCCCCA TTTA TGGGGGAAGT CCCCGAGCTTGCGAG HAPS_2041 2004892 - 2004746 - | hypothetical protein HAPS_2042 2005185 - 2004994 - | hypothetical protein crp 2006114 - 2005440 - | catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein) HAPS_2044 2006405 - 2006181 - | hypothetical protein slmA 2007018 - 2006413 - | HTH-type nucleoid occlusion protein dut 2007482 - 2007027 - | deoxyuridine 5'-triphosphate nucleotidohydrolase HAPS_2047 2007834 - 2007508 - | hypothetical protein dfp 2008935 - 2007844 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase radC 2009339 - 2009932 + | DNA repair protein RadC TERM 2839 2010128 - 2010140 + G 71 -4.8 -4.63486 | CACACGCAATGAATG CGAC TAAAC GTCG TTTTCTTCCAAACCT rpmB 2010058 - 2010294 + | 50S ribosomal protein L28 rpmG 2010306 - 2010476 + | 50S ribosomal protein L33 TERM 2840 2010513 - 2010498 - f 86 -10.4 -3.78034 | opp_overlap 2010498 TACTTATACTAAGAA CCCAGC GAAA GCTGGG TTTTTTTATTTCTAT TERM 2841 2010498 - 2010513 + F 100 -10.4 -6.04953 | opp_overlap 2010498 TACTTATACTAAGAA CCCAGC GAAA GCTGGG TTTTTTTATTTCTAT TERM 2842 2010975 - 2010989 + F 71 -4.2 -4.72272 | overlap 2010977 AACATTCAGGAGCTA GACTTG TAG CAAGCC TTTTTGATGAAAAAG TERM 2843 2011143 - 2011169 + F 73 -9.4 -2.83737 | opp_overlap 2011132, overlap 2011142 2011140 GTTATTCAAGAGCTA CCCCTGAAGGCT TTA AACTTTCGGGGG GTGTTTTGGATATTG TERM 2844 2011523 - 2011548 + F 100 -10.5 -5.52096 | opp_overlap 2011523 CATAATGTGATCTAA GCGGTAGGATT TACG AATCTTGCCGC TTTTTTATTAGATTT TERM 2845 2011586 - 2011604 + F 83 -9 -4.34859 | overlap 2011565 AAATAAATTTTTTTA TCTTAAGA CTT TCTTAAGA TTTCTCTGTTTTAAT HAPS_2053 2011670 - 2012035 + | OB-fold nucleic acid binding domain-containing protein TERM 2846 2012044 - 2012074 + F 83 -9.1 -4.24002 | opp_overlap 2012046 2012051, overlap 2012046 2012051 AAATTAATGCGATAA TAGGAAAGTGGCA GTAAA TGCCACTTTTCTC TTTTAGAATTTGGAG TERM 2847 2012046 - 2012072 + F 91 -11.7 -3.71804 | opp_overlap 2012046 2012051, overlap 2012044 2012051 ATTAATGCGATAATA GGAAAGTGGCA GTAAA TGCCACTTTTC TCTTTTAGAATTTGG TERM 2848 2012072 - 2012046 - f 75 -9.5 -3.25459 | opp_overlap 2012046 2012044 2012051, overlap 2012051 ATTAATGCGATAATA GGAAAGTGGCA GTAAA TGCCACTTTTC TCTTTTAGAATTTGG TERM 2849 2012067 - 2012051 - f 74 -8 -3.97088 | opp_overlap 2012051 2012046 2012044, overlap 2012046 TGCGATAATAGGAAA GTGGCA GTAAA TGCCAC TTTTCTCTTTTAGAA TERM 2850 2012051 - 2012067 + F 89 -8 -4.89567 | opp_overlap 2012046 2012051, overlap 2012046 2012044 TGCGATAATAGGAAA GTGGCA GTAAA TGCCAC TTTTCTCTTTTAGAA cheY 2012096 - 2012767 + | two component transcriptional regulator/response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain TERM 2851 2012829 - 2012859 + G 70 -9.1 -3.14881 | gap 1 GCGTTGCTTATTTGG CTTGTATCCACTGC AGTG GC-GTGGGTGCAAG TTCGTCACGAAGTTG TERM 2852 2013006 - 2012994 - g 87 -4.9 -5.36965 | opp_overlap 2012994, overlap 2012987 GAACACCATAAAAAA TCTTT TAA AAAGA TCGCTTTCGATGATG qseC 2012754 - 2014154 + | sensor protein QseC/integral membrane sensor signal transduction histidine kinase TERM 2853 2014278 - 2014301 + G 89 -11.8 -3.52714 | opp_overlap 2014277 2014278, overlap 2014270 CGGCAGGCATCAAAT CCGCAGAATT AAAC AGTTCTGCGG TTCTGCTCGTTTTGT TERM 2854 2014301 - 2014278 - g 71 -9.6 -2.8552 | opp_overlap 2014278 2014270, overlap 2014277 CGGCAGGCATCAAAT CCGCAGAATT AAAC AGTTCTGCGG TTCTGCTCGTTTTGT HAPS_2056 2014217 - 2014333 + | hypothetical protein groES 2014546 - 2014833 + | co-chaperonin GroES (HSP10) TERM 2855 2014928 - 2014908 - f 75 -9.7 -2.92267 | overlap 2014905 TTTACAAATTAATCA CGGACACAC GCA GTGTGTCCC TACAAGGAATAAAAA groEL 2014944 - 2016587 + | chaperonin GroEL (HSP60 family) TERM 2856 2016639 - 2016618 - f 90 -13.1 -2.82834 | opp_overlap 2016618 TATTTGAGTAGTAGA GCTAAACCC GTAT GGGTTTAGC TTTTTTCTTTTCAAG TERM 2857 2016618 - 2016639 + F 100 -13.1 -5.79595 | opp_overlap 2016618 TATTTGAGTAGTAGA GCTAAACCC GTAT GGGTTTAGC TTTTTTCTTTTCAAG HAPS_2059 2016754 - 2017806 + | galactose-1-phosphate uridylyltransferase HAPS_2060 2017882 - 2018391 + | ISHin1, family IS3 TERM 2858 2018598 - 2018581 - g 83 -4.9 -5.1963 | TGGAATTAAGAAAAA TATGGCT GATT AACCATA AAAAAGTCCAACGCT TERM 2859 2019200 - 2019168 - g 88 -11.4 -3.78902 | CAAGTAAGATTGAAA GGACTAAGCCCTGT GGAAT ACAGAACTCAGTCC TTGAACTAAATCAGT HAPS_2061 2018388 - 2019209 + | ISHin1, family IS3 TERM 2860 2019225 - 2019251 + T 74 -8 -3.86015 | opp_overlap 2019241 2019242 2019243 ATCAGTCTAACTTTT TGGGGGCAGA TCAAAAT TCTTCCCCCA TTTATGGGGGAAGTC TERM 2861 2019266 - 2019241 - T 78 -7.5 -4.34402 | opp_overlap 2019225, overlap 2019242 2019243 GGGGGCAGATCAAAA TTCTTCCCCCA TTTA TGGGGGAAGTC CCTGAGCGTTAGCGA TERM 2862 2019265 - 2019242 - T 80 -11 -3.2032 | opp_overlap 2019225, overlap 2019241 2019243 GGGGCAGATCAAAAT TCTTCCCCCA TTTA TGGGGGAAGT CCCTGAGCGTTAGCG TERM 2863 2019264 - 2019243 - T 93 -14.5 -2.51871 | opp_overlap 2019225, overlap 2019242 2019241 GGGCAGATCAAAATT CTTCCCCCA TTTA TGGGGGAAG TCCCTGAGCGTTAGC TERM 2864 2019344 - 2019323 - T 90 -3.7 -5.7946 | gap 1 CTGTGAACAAAAAAA GCGGATAGAG AGC CTCT-CCCAC AATTTGTGTAAATAC TERM 2865 2019357 - 2019392 + T 83 -7.1 -4.77165 | gap 1, opp_overlap 2019357 CACAATTTGTGTAAA TACCTGTTTCTGAGAT AATAC AT-TCAGACACAGGTA TTTTATTATGAACGA TERM 2866 2019805 - 2019828 + T 71 -8.9 -3.18274 | ATTTATGATTGATTT TGGTGATCG CTTAGA CGATCACCG TTAAGTTGAAATGGG TERM 2867 2019971 - 2019941 - T 100 -18.6 -3.62096 | overlap 2019944 2019961 GTCTACTATGCCAAA CAATGCCATTGTTA AAA TAACAATGGCATTG AGCATGAAATTCTAA TERM 2868 2019968 - 2019944 - T 100 -14.5 -3.94634 | overlap 2019941 2019961 TACTATGCCAAACAA TGCCATTGTTA AAA TAACAATGGCA TTGAGCATGAAATTC TERM 2869 2020757 - 2020769 + T 73 -9.1 -3.42574 | CCGAATTTCCAGTTG GACCC GCA GGGTC TTGTGATCCCGTTGG TERM 2870 2020963 - 2020985 + T 95 -14.2 -2.74563 | overlap 2020954 CCCTGCGGTCCTTGT GGTCCTGTTG CTC CAGCAGGACC TGCTTCGCCTCTAGG TERM 2871 2021059 - 2021096 + T 100 -14.7 -3.4252 | TCTCCTTTTGGACCC GCTGGACCCGCAGGGCC TCGT GGTCCTGCTGGACCCGC TTGTCCTGGATCGCC TERM 2872 2021866 - 2021882 + T 78 -9.5 -3.55622 | opp_overlap 2021857 2021846 CCAATAGCATTATTA TCAACAC TTT GTGTTGA TTTAAAGCCGTTAGC TERM 2873 2022422 - 2022454 + T 70 -6.4 -4.02132 | opp_overlap 2022438 TAAGAGATTGTGCCC CAGTTGCACTAG CCAATGCAC CTATTGCAACTG TTTGTCCATTTAACG TERM 2874 2023076 - 2023097 + T 100 -15.9 -3.13164 | GCTTTCGCTCGGGCA CTTCCCCCG CAAG CGGGGGAAG TTAACTCCTTGACAA HAPS_2064 2023505 - 2023347 - | hypothetical protein TERM 2875 2023449 - 2023486 + g 90 -11.5 -4.10657 | gap 1, opp_overlap 2023449 AAGTGTTGGTAAAAA GTGGGC-TAAAGCCTTAT AGT ACAAGGCTTTAAGCTCAC TTTTGAAGAATATAC TERM 2876 2023486 - 2023449 - G 93 -11.5 -4.57341 | gap 1, opp_overlap 2023449 AAGTGTTGGTAAAAA GTGGGCT-AAAGCCTTAT AGT ACAAGGCTTTAAGCTCAC TTTTGAAGAATATAC TERM 2877 2023535 - 2023522 - R 76 -2.4 -5.51046 | TAAATATAGAAAAAA CAAC AAATAG GTTG GAAGGGTTATTTAAA erpA 2024167 - 2023826 - | iron-sulfur cluster insertion protein ErpA TERM 2878 2024221 - 2024253 + r 72 -8 -3.66803 | gap 2, opp_overlap 2024221 2024214, overlap 2024231 2024232 TCTAACAATTATGAA TTAAGGGCAATGGGAT GGT ATCCCA-T-CCCTTAA TTTAAAATATTCCAG TERM 2879 2024232 - 2024249 + r 84 -11.3 -3.54146 | opp_overlap 2024221 2024214, overlap 2024231 2024221 TGAATTAAGGGCAAT GGGATGG TATC CCATCCC TTAATTTAAAATATT obgE 2025453 - 2024278 - | GTPase ObgE HAPS_2067 2026410 - 2025478 - | permeases of the drug/metabolite transporter (DMT) superfamily, conserved membrane protein HAPS_2068 2027278 - 2026412 - | permeases of the drug/metabolite transporter (DMT) superfamily, putative transport protein TERM 2880 2027364 - 2027401 + r 74 -8.5 -3.69534 | opp_overlap 2027372, overlap 2027365 2027370 2027371 2027372 TTTGTTTCAATGGTA ATAAAAAACCCCGCTAA TTGA TTAGCGGGGCATTTTAA TCTTATTCTTTTGAA TERM 2881 2027365 - 2027400 + r 84 -12 -2.80636 | opp_overlap 2027372, overlap 2027364 2027370 2027371 2027372 TTGTTTCAATGGTAA TAAAAAACCCCGCTAA TTGA TTAGCGGGGCATTTTA ATCTTATTCTTTTGA TERM 2882 2027370 - 2027395 + r 82 -7.5 -4.50841 | opp_overlap 2027372, overlap 2027365 2027364 2027371 2027372 TCAATGGTAATAAAA AACCCCGCTAA TTGA TTAGCGGGGCA TTTTAATCTTATTCT TERM 2883 2027371 - 2027394 + r 80 -11 -3.28878 | opp_overlap 2027372, overlap 2027370 2027365 2027364 2027372 CAATGGTAATAAAAA ACCCCGCTAA TTGA TTAGCGGGGC ATTTTAATCTTATTC TERM 2884 2027372 - 2027393 + r 93 -14.5 -2.56242 | opp_overlap 2027372, overlap 2027371 2027370 2027365 2027364 AATGGTAATAAAAAA CCCCGCTAA TTGA TTAGCGGGG CATTTTAATCTTATT TERM 2885 2027393 - 2027372 - R 100 -14.5 -5.4756 | opp_overlap 2027372 2027371 2027370 2027365 2027364 AATGGTAATAAAAAA CCCCGCTAA TTGA TTAGCGGGG CATTTTAATCTTATT rpmA 2027676 - 2027419 - | 50S ribosomal protein L27 rplU 2028008 - 2027697 - | 50S ribosomal protein L21 TERM 2886 2028141 - 2028126 - R 76 -4.8 -4.95896 | overlap 2028120 AGAAATTGAGAAAAA TTTGAA ATTC TTCAAA AACAAACAAAAAAGA TERM 2887 2028184 - 2028155 - R 100 -10.9 -5.88476 | opp_overlap 2028155 AAAACAAACAAAAAA GATCGTTTAGAGA AGGA TCTTTAAACGATC TTTTTAAGCTCACTC TERM 2888 2028155 - 2028184 + r 100 -13.1 -4.62783 | opp_overlap 2028155 AAAACAAACAAAAAA GATCGTTTAGAGA AGGA TCTTTAAACGATC TTTTTAAGCTCACTC nagA 2029357 - 2028206 - | N-acetylglucosamine-6-phosphate deacetylase TERM 2889 2028981 - 2028992 + g 73 -2.2 -5.19879 | CCTTCTAAATGCAAA CCGA GTGC TTGG TTTTTATATTTAGCC nagB 2030161 - 2029367 - | glucosamine-6-phosphate deaminase dapF 2031385 - 2030561 - | diaminopimelate epimerase TERM 2890 2032232 - 2032217 - g 78 -7.6 -4.35116 | opp_overlap 2032222 CAGCTGAGATCAAAA TTAGCC CAAC GGCTAA AACCTCTGTTGGTTT dcuB 2031538 - 2032860 + | anaerobic C4-dicarboxylate transporter TERM 2891 2033075 - 2033042 - T 100 -14.2 -5.24796 | opp_overlap 2033044 2033047 2033051 CTCATAGAATAAAAA TAGCTTAAAGTCTT TATTAT AAGACTTTAAGCTA TATGAAAAGGCATTT TERM 2892 2033044 - 2033073 + T 84 -12.4 -2.87211 | opp_overlap 2033042, overlap 2033047 2033051 CATAGAATAAAAATA GCTTAAAGTCTT TATTAT AAGACTTTAAGC TATATGAAAAGGCAT panF 2034552 - 2033122 - | sodium/panthothenate symporter TERM 2893 2034271 - 2034255 - G 73 -6.6 -4.2349 | opp_overlap 2034247 TTTGGAGAGCCAAAA TGGCAA TTCGT TTGCCA ACAATCCCTAATGAG HAPS_2076 2034781 - 2034542 - | predicted membrane protein TERM 2894 2034685 - 2034672 - G 72 -3.1 -5.12707 | gap 1 GGAAAGCCTAAAAAA CCTCGC CCT GC-AGG TGAAAAATAAGCAAA TERM 2895 2034826 - 2034811 - R 76 -4.6 -5.10933 | opp_overlap 2034811, overlap 2034806 TTAGCTAAAATAAAA CCTCGC AGTT GAGAGG TTTGAAATCATTTAA metJ 2035155 - 2034838 - | transcriptional repressor protein MetJ corA 2035490 - 2036455 + | magnesium/nickel/cobalt transporter CorA TERM 2896 2036558 - 2036538 - T 90 -11.9 -3.54653 | opp_overlap 2036538 ATTGTCACCAGATAA TAGCCACGC ATA ACGTGGCTA TTTTGCTTTTAACGT TERM 2897 2036538 - 2036558 + T 95 -11.2 -4.67641 | opp_overlap 2036538 ATTGTCACCAGATAA TAGCCACG CATAA CGTGGCTA TTTTGCTTTTAACGT mfd 2040220 - 2036567 - | transcription-repair coupling factor TERM 2898 2040438 - 2040458 + G 72 -9.7 -3.01791 | TTTTTTGTAGCCAAG CCCTTGCGA TTT TTGCAGGGG TATTAGGCGACCGCT mdtH 2040284 - 2041348 + | putative multidrug resistance protein mdtH TERM 2899 2041393 - 2041352 - T 100 -11.1 -4.82901 | opp_overlap 2041355 2041357 TTTTTGGTATAAAAA TAAGCGGTAAGATAATG TATTTTGC CTTCATCTTACCGCTTA TAGGGAATGCTATTT TERM 2900 2041355 - 2041390 + T 76 -9.2 -3.30441 | gap 1, opp_overlap 2041352, overlap 2041357 TTGGTATAAAAATAA GCGGTAAGAT-AATGTA TTT TGCCTTCATCTTACCGC TTATAGGGAATGCTA thrC 2042677 - 2041403 - | threonine synthase TERM 2901 2043106 - 2043063 - H 79 -11.2 -3.08032 | gap 1 TCTTTTTTAAAAGCA TCTGCACCTGCACCGAGAATT GAA AGTTCTCG-TACAGACGCAGA ATATCGCAAATTACG TERM 2902 2044366 - 2044392 + H 76 -7.9 -4.03413 | opp_overlap 2044365 2044368 TTATTTTAATGAATG TAGGGGCGAGG TTTAT CCTCGCCCGAA TTTATATAAACACAT TERM 2903 2044390 - 2044368 - H 76 -10.5 -2.60423 | opp_overlap 2044366, overlap 2044365 ATTTTAATGAATGTA GGGGCGAGG TTTAT CCTCGCCCG AATTTATATAAACAC TERM 2904 2044687 - 2044677 - g 73 -5.4 -4.59414 | overlap 2044671 GCAGAACAAGCAAAA GCTT TTG AAGC GTTAGCGGCAGAGGG fklB 2044443 - 2045072 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 2905 2045115 - 2045065 - T 74 -9.2 -2.98015 | opp_overlap 2045074 2045081, overlap 2045077 2045081 TGGAATTATTAGATA TTGTTTAAGTGATAAAGGACGTCA TGC TGGCGTCCTTTATCATTCAATGAA TCGTCTTATTTCAAC TERM 2906 2045074 - 2045106 + T 100 -18.7 -3.08642 | opp_overlap 2045065 2045077 2045081, overlap 2045081 TAGATATTGTTTAAG TGATAAAGGACGTCA TGC TGGCGTCCTTTATCA TTCAATGAATCGTCT TERM 2907 2045103 - 2045077 - T 82 -12.4 -2.53015 | opp_overlap 2045074 2045081, overlap 2045065 2045081 ATATTGTTTAAGTGA TAAAGGACGTCA TGC TGGCGTCCTTTA TCATTCAATGAATCG TERM 2908 2045081 - 2045099 + T 89 -11 -4.06904 | opp_overlap 2045077 2045065 2045081, overlap 2045074 TGTTTAAGTGATAAA GGACGTCA TGC TGGCGTCC TTTATCATTCAATGA TERM 2909 2045099 - 2045081 - T 80 -8.8 -3.97368 | opp_overlap 2045081 2045074, overlap 2045077 2045065 TGTTTAAGTGATAAA GGACGTCA TGC TGGCGTCC TTTATCATTCAATGA tpx 2045621 - 2045121 - | thiol peroxidase HAPS_2086 2045794 - 2045618 - | hypothetical protein plsC 2045775 - 2046497 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase sufI 2046499 - 2047908 + | protein SufI precursor/multicopper oxidase type 3 TERM 2910 2048174 - 2048162 - g 88 -4.1 -5.71712 | GTTTACAGAAAAAAA GTGAA GAA CTCAC CAAGAAAACATTCTC accA 2048029 - 2048982 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 2911 2049129 - 2049157 + T 100 -8.3 -5.8901 | ATATCGTCGAGTTTA TGTGGCATTAT TTAATCC GTAATGCCACA TTTTTTATTTTGTCT TERM 2912 2049400 - 2049367 - T 86 -9.8 -4.19483 | opp_overlap 2049374, overlap 2049374 TTACACATAGAGAAA TAAAAAACTCAGCC GATTTT GACTGAGTTTTTCA TTTTAAGGGGAAGGG TERM 2913 2049393 - 2049374 - T 88 -5.7 -5.76237 | opp_overlap 2049374, overlap 2049367 TAGAGAAATAAAAAA CTCAGCC GATTTT GACTGAG TTTTTCATTTTAAGG TERM 2914 2049374 - 2049393 + T 76 -4.2 -5.0925 | opp_overlap 2049374 2049367 TAGAGAAATAAAAAA CTCAGCCG ATTT TGACTGAG TTTTTCATTTTAAGG HAPS_2089 2049604 - 2049419 - | bacteriophage transcriptional regulator TERM 2915 2050333 - 2050345 + G 70 -9.1 -3.20218 | opp_overlap 2050330, overlap 2050331 2050336 TTTTCCAAATTATGT CTGCC GCA GGCAG TGTGGTTTTTGCTAA TERM 2916 2050636 - 2050653 + G 85 -5.5 -5.24551 | overlap 2050648 GATTTGTTCCTATTG TTACCGC GTTT GCGGCAA TTTTTGTTGGTTTCC ptsEII 2050164 - 2051657 + | PTS system, IIBC components TERM 2917 2051678 - 2051701 + T 100 -12.6 -5.10461 | opp_overlap 2051675 2051678 TTGTCCAAGATAGCA TGCCTCTAAA GTAT TTTAGAGGCA TTTTTGTTGCGTAGA TERM 2918 2051701 - 2051678 - T 85 -12.6 -2.7535 | opp_overlap 2051678, overlap 2051675 TTGTCCAAGATAGCA TGCCTCTAAA GTAT TTTAGAGGCA TTTTTGTTGCGTAGA HAPS_2093 2052942 - 2051956 - | ISIMb1, family IS110 TERM 2919 2052164 - 2052176 + g 71 -4.8 -4.62069 | AGTGCCTTACGAATG TCGG ATTGC CCGA TTTTTGAAATACCAA TERM 2920 2053086 - 2053113 + H 100 -10.7 -5.08255 | opp_overlap 2053086 CTACTTTCTCTATAA CCCCATTATGA AGGTAC TCGTAATGGGG TTTTCTTTTGCCCAT TERM 2921 2053113 - 2053086 - H 76 -9.2 -3.29144 | opp_overlap 2053086 CTACTTTCTCTATAA CCCCATTATGAA GGTA CTCGTAATGGGG TTTTCTTTTGCCCAT TERM 2922 2053384 - 2053398 + H 76 -3.4 -5.33405 | overlap 2053367 GCAGGTATTGGTATT GCCAGT GGC GCAGGC TTTTTCTTTGATGCG TERM 2923 2054592 - 2054561 - H 86 -4.5 -5.65496 | gap 1, opp_overlap 2054561 2054569 CACGAAAAATAAAAA CGCTGCAAGCCTTA TCTAT CAAGGCTTTCA-CG ATTTTTAGGAACGCT HAPS_2096 2055362 - 2056144 + | amino acid ABC transporter, substrate-binding TERM 2924 2056207 - 2056226 + F 76 -4.9 -5.07011 | TCATAAATGGTTTCT GGCCGAT GGTACA AGCGGCC TTTTTAGTTTCTATC TERM 2925 2056551 - 2056571 + G 73 -10.5 -2.87881 | opp_overlap 2056551 GGTCAGTGGGAAGCA GGTTATACC ATC GGTATGACC TATATGCAGACATTC yckJ 2056212 - 2056850 + | ABC-type amino acid transport system, permease component yckI 2056853 - 2057602 + | ABC-type amino acid transport system, ATPase component HAPS_2100 2058101 - 2060143 + | hypothetical protein gltD 2061698 - 2060271 - | glutamate synthase (NADPH), subunit beta TERM 2926 2061849 - 2061874 + r 79 -11.3 -2.76696 | gap 1, overlap 2061848 TTAACAAATCTCCCC CTGCCCCTCTTT GCT AAAGAGGGG-AG CTTGTTCAGAGGGAA gltB 2065901 - 2061915 - | glutamate synthase (ferredoxin), subunit alpha TERM 2927 2062791 - 2062780 - G 71 -7.2 -3.85698 | opp_overlap 2062771 2062787 GCTTGGGTGCAGAAA CGGC TACT GCCG TCTGGCACTTTTGGC TERM 2928 2062888 - 2062876 - G 77 -7.7 -4.1711 | opp_overlap 2062876 2062885 ATGATTTCTAATAAA TCGGT GCA ACCGA TTAAGTCGGTTAATT TERM 2929 2062945 - 2062970 + g 87 -8.4 -4.62069 | opp_overlap 2062929, overlap 2062929 TCACGCACATCTTGG GCGATGAATT TAAAGT AGTTCATCGC TTTTTCAGGTAAGCC TERM 2930 2065934 - 2065909 - H 81 -6.9 -4.57482 | gap 1, overlap 2065910 CGAGCCACAAACAAA CGGCGT-TGCAA ATC CTGCACACGCCA ACCGCTAGGTGCATC TERM 2931 2065933 - 2065910 - H 70 -8.2 -3.33766 | gap 1, overlap 2065909 GAGCCACAAACAAAC GGCGT-TGCAA ATC CTGCACACGCC AACCGCTAGGTGCAT HAPS_2103 2065914 - 2066369 + | hypothetical protein HAPS_2104 2067493 - 2066507 - | ISIMb1, family IS110 TERM 2932 2066715 - 2066727 + g 71 -4.8 -4.62069 | AGTGCCTTACGAATG TCGG ATTGC CCGA TTTTTGAAATACCAA TERM 2933 2067637 - 2067664 + r 100 -10.7 -5.08255 | opp_overlap 2067637 CTACTTTCTCTATAA CCCCATTATGA AGGTAC TCGTAATGGGG TTTTCTTTTGCCCAT TERM 2934 2067664 - 2067637 - R 76 -9.2 -3.29144 | opp_overlap 2067637 CTACTTTCTCTATAA CCCCATTATGAA GGTA CTCGTAATGGGG TTTTCTTTTGCCCAT TERM 2935 2069597 - 2069614 + r 70 -9.1 -3.07291 | opp_overlap 2069597 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 2936 2070016 - 2069991 - R 73 -3.3 -5.15167 | opp_overlap 2069992, overlap 2069992 GAGTAGTAAGAAAAA TCTTGACTG AACAAAAG CAGTCAAGT GTTTAGTAGTTAATA TERM 2937 2070376 - 2070361 - R 76 -7.6 -4.00323 | GCAAAGACAGAAGAA TTGGCT GGGA AGCCAA GCGACACAGGGTGAT TERM 2938 2071474 - 2071460 - R 73 -5.7 -4.58213 | TAAGTAACGATAAAA CGAGT GAAAA ACTCG TTCGCCGGAAGACCA TERM 2939 2073490 - 2073525 + r 83 -7.1 -4.77165 | gap 1, opp_overlap 2073490 CACAATTTGTGTAAA TACCTGTTTCTGAGAT AATAC AT-TCAGACACAGGTA TTTTATTATGAACGA TERM 2940 2073937 - 2073960 + r 71 -8.9 -3.18274 | ATTTATGATTGATTT TGGTGATCG CTTAGA CGATCACCG TTAAGTTGAAATGGG HAPS_2110 2074387 - 2074076 - | putative translation initiation inhibitor, yjgF family TERM 2941 2074444 - 2074405 - R 80 -8.6 -3.90112 | opp_overlap 2074408 2074417 TTCCTCCTAATGAAA GCGGTGAGTAGATAGCAA ATTT TTGCTATTCTCTCACTGC TTGAAAATGAATTAC ilvE 2075475 - 2074456 - | branched-chain amino acid aminotransferase TERM 2942 2075548 - 2075537 - H 74 -3 -5.27335 | overlap 2075541 GTTTCTAAAGAAAAA TGAA TGTT TTCA ATGAAAAAATAGGAT TERM 2943 2075657 - 2075641 - H 100 -13.7 -5.24129 | TTCTGCTATAAAAAA CCGCCCA ACA TGGGCGG TAGCTAAACCAAAAG gcvA 2075914 - 2076810 + | DNA-binding transcriptional activator GcvA HAPS_2113 2076832 - 2077506 + | nucleotidase/putative HAD superfamily haloacid dehalogenase-like hydrolase cysB 2077572 - 2078507 + | HTH-type transcriptional regulator CysB HAPS_2115 2078611 - 2078952 + | possible outer membrane protein TERM 2944 2079609 - 2079587 - g 88 -9.2 -4.56775 | opp_overlap 2079587 2079586 2079584 2079587 ATCGTTTTGCAAAAA TGGTTAAACC GTT GGTTAAACCA CTCTTCTGGGTAGCT icc 2079490 - 2080179 + | cyclic 3',5'-adenosine monophosphate phosphodiesterase ldhA 2081263 - 2080274 - | D-lactate dehydrogenase HAPS_2118 2082340 - 2081273 - | hypothetical protein dcm 2083299 - 2082337 - | DNA-cytosine methyltransferase/C-5 cytosine-specific DNA methylase ispG 2084416 - 2083307 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 2945 2083454 - 2083434 - G 70 -2.5 -5.1244 | overlap 2083436 CCATCAAGATAAAAA CCGCTCA TTTTATT TGAGCCG GTCACGCCAAGATCA HAPS_2121 2085500 - 2084418 - | hypothetical protein TERM 2946 2084949 - 2084961 + g 82 -7.7 -4.56775 | overlap 2084939 TACTGTTGCAGGTGT TGCAG GTT CTGCA TTTTTAGCAGGCAAT TERM 2947 2085438 - 2085450 + g 74 -4.1 -5.17054 | opp_overlap 2085438 AATCGTCAAATTTAA TGCTT CAC GAGCA TTTTTTAGCTGTTGT sppA 2087501 - 2085636 - | protease IV, signal peptide peptidase TERM 2948 2087978 - 2087995 + G 73 -5.5 -4.57482 | GTAGGCCTAATTTTT GCTCGTG GTAT CACCAGC TTTATTTCTGCCTAC msbA 2087720 - 2089501 + | lipid transporter ATP-binding/permease protein pnuC 2089641 - 2090324 + | nicotinamide mononucleotide transporter, fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component TERM 2949 2090346 - 2090372 + F 90 -8.9 -4.65168 | gap 1, opp_overlap 2090350, overlap 2090350 AAATCTCTTATAAAT C-AAAGGTTGAG ACTT CTCAACCTTTCG TTTTTCCGCTATCCT TERM 2950 2090367 - 2090350 - f 86 -9.9 -4.13995 | opp_overlap 2090346 2090350 CTCTTATAAATCAAA GGTTGAG ACTT CTCAACC TTTCGTTTTTCCGCT TERM 2951 2090350 - 2090367 + F 86 -9.9 -4.32649 | opp_overlap 2090350, overlap 2090346 CTCTTATAAATCAAA GGTTGAG ACTT CTCAACC TTTCGTTTTTCCGCT yfgE 2090387 - 2091127 + | DNA replication initiation factor/chromosomal replication initiator DnaA ccmA 2091128 - 2091754 + | Cytochrome c biogenesis ATP-binding export protein ccmA/heme exporter protein A TERM 2952 2092097 - 2092112 + G 93 -10.4 -4.67563 | CCTTTAATTCTGCTT TCGCCG ATTA CGGCGA TTTTACTTTCTCTTG ccmB 2091764 - 2092426 + | cytochrome c-type biogenesis protein/heme exporter protein B TERM 2953 2092567 - 2092580 + G 76 -6.7 -4.4846 | overlap 2092566 TCTTAAGTTTTTTAT TGCTG TCAG CAGCA TTTATTATTGGCTTG ccmC 2092473 - 2093213 + | cytochrome c-type biogenesis protein/heme exporter protein C TERM 2954 2093240 - 2093250 + G 85 -5.4 -5.28176 | ACCTTTCAATTTGCA TCAC TTA GTGA TTTTTTCTCAATGGG ccmD 2093222 - 2093416 + | cytochrome c-type biogenesis protein/heme exporter protein D TERM 2955 2093436 - 2093460 + F 100 -9.4 -5.08088 | gap 1, overlap 2093439 TTGGATAATATTTTC GAA-GGTAGGC AAGA GCCTACCTTTC TTTTTGTTAAAAATT TERM 2956 2093439 - 2093456 + F 100 -11.3 -5.05606 | overlap 2093436 GATAATATTTTCGAA GGTAGGC AAGA GCCTACC TTTCTTTTTGTTAAA TERM 2957 2093493 - 2093474 - f 71 -5.1 -4.56597 | opp_overlap 2093490, overlap 2093490 TCTTTTTGTTAAAAA TTTGTGA TATAAC TCACAAA TCCAACATTTGCTTA TERM 2958 2093549 - 2093560 + F 70 -3 -5.18371 | ACTAATTTGGTTTAT TGAT CTAC ATCA TTTTATTTTGTGGGG HAPS_2130 2093581 - 2094969 + | di- and tricarboxylate transporter TERM 2959 2094982 - 2095016 + F 100 -22.4 -3.02144 | opp_overlap 2094990, overlap 2094990 TAATCCGTATCTTTA TGCAAAAAGCGGTCAC TTC GTGGCCGCTTTTTGCA TCTTAAGGAAGATAG TERM 2960 2094990 - 2095008 + F 100 -12.4 -4.74706 | opp_overlap 2094990, overlap 2094982 ATCTTTATGCAAAAA GCGGTCAC TTC GTGGCCGC TTTTTGCATCTTAAG TERM 2961 2095008 - 2094990 - f 91 -10.2 -4.66163 | opp_overlap 2094990 2094982 ATCTTTATGCAAAAA GCGGTCAC TTC GTGGCCGC TTTTTGCATCTTAAG pgk 2095370 - 2096383 + | phosphoglycerate kinase HAPS_2133 2096547 - 2096428 - | hypothetical protein TERM 2962 2096607 - 2096589 - gH 75 -2.5 -5.28778 | gap 1, overlap 2096590 2096591 ATGACGTACAAAAAA TC-TTTGC TTAT GCAAAAGA ACACAACTTCGCACT fba 2096528 - 2097607 + | fructose bisphosphate aldolase sapF 2097780 - 2098580 + | peptide transport system ATP-binding protein SapF HAPS_2135 2098593 - 2099231 + | putative NAD(P)H nitroreductase HAPS_2136 2099320 - 2099853 + | predicted membrane protein ordL 2101236 - 2099938 - | oxidoreductase OrdL greB 2102249 - 2101770 - | transcription elongation factor GreB kpsF 2103184 - 2102249 - | arabinose-5-phosphate isomerase pilF 2103827 - 2103246 - | fimbrial biogenesis and twitching motility protein PilF-like protein HAPS_2144 2104846 - 2103875 - | ISNme5, family IS110 TERM 2963 2104004 - 2104033 + g 88 -11.5 -3.53761 | opp_overlap 2104032 GACTTTCTTCGCTTT GCCTTTTGCAACC AATC GGGTGTAAAAGGC TTTAAAAACAGGTTC TERM 2964 2105028 - 2105008 - R 84 -9.7 -3.6914 | opp_overlap 2105016, overlap 2105009 2105012 2105016 AATTTTAATATACAA GGGACACAC TGC GTGTGTCCG CCGATACGAATTACG TERM 2965 2105027 - 2105009 - R 90 -13.2 -2.80761 | opp_overlap 2105016, overlap 2105008 2105012 2105016 ATTTTAATATACAAG GGACACAC TGC GTGTGTCC GCCGATACGAATTAC TERM 2966 2105070 - 2105012 - R 100 -15.5 -2.66335 | gap 1, opp_overlap 2105016 2105054, overlap 2105009 2105008 2105016 TTAATATACAAGGGA CACACTGCGTGTGTCCGCCGATACGAAT TACG ATT-GTTGGAACGGACACACGCAGTGTG TCCCTACCTTGAAAT TERM 2967 2105066 - 2105016 - R 70 -9.1 -2.97425 | gap 1, opp_overlap 2105016 2105054, overlap 2105009 2105008 2105012 TATACAAGGGACACA CTGCGTGTGTCCGCCGATACGAAT TACG ATT-GTTGGAACGGACACACGCAG TGTGTCCCTACCTTG TERM 2968 2105054 - 2105074 + r 73 -9.7 -2.54523 | opp_overlap 2105016 2105012, overlap 2105016 TTACGATTGTTGGAA CGGACACAC GCA GTGTGTCCC TACCTTGAAATGTGC HAPS_2145 2106249 - 2105089 - | predicted Fe-S-cluster redox enzyme TERM 2969 2106420 - 2106442 + r 75 -9.2 -3.1585 | opp_overlap 2106419 2106418, overlap 2106419 GATCACAAAAATAGT TCGGCTTG CGGTAAA CAAGCCGA TATTCACTTAAATGC rsaL 2106758 - 2106450 - | DNA-binding protein, virulence gene repressor RsaL TERM 2970 2106668 - 2106679 + g 79 -5.8 -4.85177 | TCGGATCAGGAACTT CCAC AACA GTGG TTTTTAGTGTAATTT HAPS_2147 2107100 - 2106864 - | hypothetical protein TERM 2971 2107145 - 2107127 - H 78 -9 -3.75629 | opp_overlap 2107127 2107126 2107129 TATTTTTAAGTTAAA TATACGTT TAA AACGTATA GTTTATGGAAAAACA TERM 2972 2107229 - 2107208 - H 73 -6.7 -4.28971 | AGAACAAGAGATAAA TTTTTCGAC AGGG ATCGAAAAA ATAGTAATAAAGTTA gltX 2107934 - 2109373 + | glutamyl-tRNA synthetase TERM 2973 2109449 - 2109428 - T 81 -3 -5.72616 | ATTGACAGAAAAAAA GCGAGA GCATATCATT TCTCGC AATTTTGGGGATATA TERM 2974 2109569 - 2109594 + T 91 -6.2 -5.7827 | opp_overlap 2109569 CAAACATAATATAAA GCCTTGAAAT GTAAAA ACTTCAAGGC TTTTTTATTTCTCTT TERM 2975 2109594 - 2109569 - T 86 -8.4 -4.36854 | opp_overlap 2109569 CAAACATAATATAAA GCCTTGAAAT GTAAAA ACTTCAAGGC TTTTTTATTTCTCTT copA 2111987 - 2109858 - | copper-transporting P-type ATPase TERM 2976 2111102 - 2111066 - G 71 -6.6 -4.07877 | gap 1, overlap 2111067 2111093 GGACTGCAGAAATAA TCCGAGCCAGTGCAGTT TGCG AACC-CACTTGCTCGGC AAGATAAATACCAGC TERM 2977 2111101 - 2111067 - G 75 -10.1 -3.04244 | gap 1, overlap 2111066 2111093 GACTGCAGAAATAAT CCGAGCCAGTGCAGTT TGCG AACC-CACTTGCTCGG CAAGATAAATACCAG TERM 2978 2111345 - 2111333 - G 74 -6.2 -4.40561 | opp_overlap 2111337, overlap 2111330 CTCCGTCAAAAACAA CCGC TTGCT GCGG TGCTAAATCCAGCAA TERM 2979 2111541 - 2111558 + g 89 -9.9 -4.21936 | TGCAATTAAGGTGTC CATCGTG GCTG CACGATG TTTTAGACTTGTCCA TERM 2980 2111907 - 2111933 + g 100 -15.2 -5.07053 | opp_overlap 2111900, overlap 2111909 TAAATTGACTGACGA GCCTCTCCCACA ATT TGTGGGAGAGAC TTTTTTAAGCTGCTT TERM 2981 2111909 - 2111931 + g 100 -16.4 -2.77166 | opp_overlap 2111900, overlap 2111907 AATTGACTGACGAGC CTCTCCCACA ATT TGTGGGAGAG ACTTTTTTAAGCTGC cybC 2112381 - 2112007 - | soluble cytochrome b562 TERM 2982 2112427 - 2112406 - R 93 -6.5 -5.85425 | opp_overlap 2112406 2112409, overlap 2112409 CAAATAAATAAAAAA GACGTGGGA AAAT TCCCACTCC CTTATATCAGATTTC TERM 2983 2112424 - 2112409 - R 71 -9 -3.27147 | opp_overlap 2112406 2112409, overlap 2112406 ATAAATAAAAAAGAC GTGGGA AAAT TCCCAC TCCCTTATATCAGAT fabB 2113676 - 2112441 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 2984 2113767 - 2113779 + r 73 -6.3 -4.36914 | opp_overlap 2113760, overlap 2113760 ATGTAAACGAGCGGT CAGAT CCG ATCTG TTTTATACAAAAAAA HAPS_2157 2116980 - 2113834 - | type III restriction enzyme, res subunit TERM 2985 2114894 - 2114947 + g 72 -3.3 -5.1675 | overlap 2114897 2114902 GCAAAATTTTGCTCC TGCTTAGCTTGATGATAGTTATCGG TAAT CTGATCGTTATCATCAATATAATCA TTTTTTAATAGATAG mod 2118900 - 2116993 - | type III restriction-modification system methyltransferase (adenine-specific)/adenine specific DNA methylase Mod TERM 2986 2118774 - 2118717 - G 72 -10.1 -2.65091 | opp_overlap 2118707, overlap 2118716 AGTCTAAGCGATAAC GCTCTTGATTTCCTTCGACTAAGACTT CAGA AAGTTCTTGTCGAAGTAAATCAAAATC TACGCCTTTTATTAT HAPS_2159 2119242 - 2118937 - | hypothetical protein TERM 2987 2119656 - 2119619 - R 100 -9.3 -4.88918 | opp_overlap 2119603 2119614 2119619 2119622 2119653 TTATTTTAAACAAAA CAAGTTGCTTTGTCTTA TATA TAAAACTTAGCAACTTG TTCTTTGGGCAAGAA TERM 2988 2119619 - 2119656 + r 71 -7.1 -3.90744 | opp_overlap 2119619, overlap 2119603 2119614 2119622 2119653 TTATTTTAAACAAAA CAAGTTGCTTTGTCTTA TATA TAAAACTTAGCAACTTG TTCTTTGGGCAAGAA purA 2120984 - 2119686 - | adenylosuccinate synthetase TERM 2989 2120266 - 2120230 - G 82 -10.9 -3.60151 | opp_overlap 2120240 GGCCCGAAACCAGAA CCTGTTGCAATACCACC AGC GGTGGTATTTGAACTGG TTACAAATGGATAAG TERM 2990 2120240 - 2120256 + g 83 -10.9 -3.63895 | opp_overlap 2120230 CAGAACCTGTTGCAA TACCACC AGC GGTGGTA TTTGAACTGGTTACA TERM 2991 2121093 - 2121117 + r 72 -9.3 -2.73972 | opp_overlap 2121103, overlap 2121093 2121096 2121103 CTTTCAGGCATACTG TAGGGACACAC TGA GTGTGTCCTCA ATTGATCTTTTATGA TERM 2992 2121096 - 2121154 + r 90 -13.3 -2.8088 | gap 1, opp_overlap 2121103, overlap 2121093 2121093 2121103 2121130 TCAGGCATACTGTAG GG-ACACACTGAGTGTGTCCTCAATTGA TCTT TTATGAGCGGACACACTCAGTGTGTCCC TACATTTTGGTTAAT TERM 2993 2121130 - 2121158 + r 86 -8.1 -4.4773 | opp_overlap 2121103, overlap 2121103 2121096 TCAATTGATCTTTTA TGAGCGGACACAC TCA GTGTGTCCCTACA TTTTGGTTAATATAA TERM 2994 2121255 - 2121238 - R 100 -8.4 -5.56264 | opp_overlap 2121238 TTTAAAGATAAAAAA GACCCG CTTTAT CGGGTC TTTGGATACAACTAT TERM 2995 2121238 - 2121255 + r 74 -8.4 -3.65529 | opp_overlap 2121238 TTTAAAGATAAAAAA GACCCG CTTTAT CGGGTC TTTGGATACAACTAT hflC 2122154 - 2121267 - | protein HflC/membrane protease subunit, stomatin/prohibitin-like protein hflK 2123371 - 2122157 - | protein HflK/membrane protease subunit, stomatin/prohibitin-like protein TERM 2996 2123752 - 2123737 - g 74 -4.7 -4.90778 | CTCATTCAAACAAAA TTGCC AAGCTG GGCAA TAACGGAAATAGCTT TERM 2997 2123900 - 2123921 + G 78 -7.3 -4.43309 | AACTTGAACCCTTTT CGCATTTGT TTTC ACAAACGCG TTTTCGTTCGCCTTG wecD 2123617 - 2124288 + | putative TDP-D-fucosamine acetyltransferase wecE 2124288 - 2125424 + | TDP-4-keto-6-deoxy-D-glucose transaminase TERM 2998 2125578 - 2125568 - T 70 -8.2 -3.29252 | opp_overlap 2125554 2125568, overlap 2125567 TGCCACGAAATAAAC GCCC AAC GGGC TTGATCGTGGCTGAT HAPS_2167 2127049 - 2126276 - | possible iron compound ABC transporter, permease TERM 2999 2127180 - 2127213 + H 74 -3.8 -5.14563 | opp_overlap 2127183, overlap 2127181 2127183 GTTTAGAGCTAGTCG AAATGGGGCGTTTT CTTTAA AATACGCCCCATCA TTTTTTAATCAAGGA TERM 3000 2127183 - 2127210 + H 78 -9.9 -3.41701 | opp_overlap 2127183, overlap 2127181 2127180 TAGAGCTAGTCGAAA TGGGGCGTTTT CTTTAA AATACGCCCCA TCATTTTTTAATCAA TERM 3001 2127210 - 2127183 - H 82 -10.6 -3.61654 | opp_overlap 2127183 2127181 2127180 TAGAGCTAGTCGAAA TGGGGCGTTTTC TTTA AAATACGCCCCA TCATTTTTTAATCAA tolC 2127236 - 2128624 + | RND efflux system outer membrane lipoprotein/RND superfamily resistance-nodulation-cell division antiporter rnt 2129334 - 2128684 - | ribonuclease T glo1 2129738 - 2129334 - | lactoylglutathione lyase TERM 3002 2129794 - 2129767 - H 93 -6.4 -5.69068 | gap 1, overlap 2129768 2129769 TAAAAATAGAAAAAA GTGGCGATATTAT GGC ATAATCTCGCC-C TAAAATCATTTTTGA TERM 3003 2129793 - 2129769 - H 76 -10.1 -2.95008 | overlap 2129767 2129768 AAAATAGAAAAAAGT GGCGATATTAT GGC ATAATCTCGCC CTAAAATCATTTTTG TERM 3004 2130029 - 2130015 - g 73 -8.6 -3.71649 | opp_overlap 2130020, overlap 2130008 TGTGGAAAGGGCAAA TTTGCC CAG GGCAAA AAGGGCGTTTAACGG TERM 3005 2130020 - 2130058 + G 77 -8.8 -3.8613 | opp_overlap 2130008 2130015 2130033 AAAGGGCAAATTTGC CCAGGGCAAAAAGGGCGT TTA ACGGCTATTCTGCCTTGG TTCTTGGTCTTTGCG TERM 3006 2130593 - 2130580 - g 79 -5.3 -5.04265 | overlap 2130585 AAAAAACATCAAAAA TCCAA CTGC TTGGA CGGTCGCTACCTTCC HAPS_2171 2129819 - 2130643 + | DMT superfamily drug/metabolite transporter TERM 3007 2133152 - 2133168 + G 82 -10.9 -3.55444 | AGTGAGATTGACGAT TTCACCG CAA CGGTGAA TTTAGACAGTAAAGG HAPS_2172 2130692 - 2133361 + | hypothetical protein TERM 3008 2133402 - 2133383 - f 75 -8.6 -3.64599 | opp_overlap 2133382 2133397 TCAGTACATGCTAAA GGCTCAGA ATTA TCTAAGCC ACTTATTTACTAGAA TERM 3009 2134015 - 2134005 - f 70 -6.8 -4.17762 | GACTTGCCAAAATAA TGCC GTT GGCA TAATCGATCAGTATC HAPS_2174 2134368 - 2134682 + | XRE family transcriptional regulator HAPS_2175 2134880 - 2135062 + | hypothetical protein TERM 3010 2135105 - 2135135 + T 100 -10.7 -4.73388 | gap 1, opp_overlap 2135109, overlap 2135109 TTGAGGAATAAGAAG T-AAATGAGCGTGA AAAA TCACGCTCATTTCA TTTTTACTAAGCCTT TERM 3011 2135109 - 2135130 + T 100 -13.1 -4.35327 | opp_overlap 2135109, overlap 2135105 GGAATAAGAAGTAAA TGAGCGTGA AAAA TCACGCTCA TTTCATTTTTACTAA TERM 3012 2135130 - 2135109 - T 100 -13.1 -4.14945 | opp_overlap 2135109 2135105 GGAATAAGAAGTAAA TGAGCGTGA AAAA TCACGCTCA TTTCATTTTTACTAA sfcA 2137409 - 2135142 - | malic enzyme TERM 3013 2136710 - 2136722 + g 73 -7.7 -3.91897 | TGGTGTCGTCCATAC GATCG TCA CGATC TTTATAGATCACCCC ydhD 2138025 - 2137699 - | monothiol glutaredoxin-like protein recD 2140043 - 2138151 - | ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member TERM 3014 2138984 - 2138974 - G 75 -5.4 -4.67038 | overlap 2138968 TCGTCAAAACGAAAA CTTC GAC GAAG ATGACATAATGAATT TERM 3015 2139575 - 2139586 + g 76 -4.4 -5.03314 | opp_overlap 2139570, overlap 2139570 GTTTAGTTAATGCTG TTGC AACC GCAA TTTTTTGCCAATCCG TERM 3016 2140146 - 2140187 + r 90 -13.3 -2.80512 | opp_overlap 2140158, overlap 2140148 2140158 AATTGATGGAAGCAG TATATAAAAAAATCCACGC ATTT GCGTGGATTTTTTAAGATA ATATTTGTTAAAAAT TERM 3017 2140148 - 2140185 + r 83 -11.5 -2.94561 | opp_overlap 2140158, overlap 2140146 2140158 TTGATGGAAGCAGTA TATAAAAAAATCCACGC ATTT GCGTGGATTTTTTAAGA TAATATTTGTTAAAA TERM 3018 2140158 - 2140175 + r 100 -11.3 -5.06451 | opp_overlap 2140158, overlap 2140148 2140146 CAGTATATAAAAAAA TCCACGC ATTT GCGTGGA TTTTTTAAGATAATA TERM 3019 2140175 - 2140158 - R 100 -11.3 -5.74122 | opp_overlap 2140148 2140146 2140158 CAGTATATAAAAAAA TCCACGC ATTT GCGTGGA TTTTTTAAGATAATA hxuC 2142328 - 2140202 - | heme/hemopexin utilization protein C/outer membrane receptor protein, mostly Fe transport TERM 3020 2140525 - 2140537 + g 79 -5.5 -4.87803 | AGGCTTCCTGTGTTT GGCGA TTT TTGCC TTTTGTTTGAGCATA TERM 3021 2140643 - 2140662 + g 71 -7.2 -3.87815 | gap 1, overlap 2140641 ATTTCGATACTGCGA GAGAGATGG AAT CC-TCTCTC TTTGTGAAGCTCGGA TERM 3022 2142403 - 2142382 - H 74 -7.5 -3.8802 | opp_overlap 2142382 2142398, overlap 2142371 2142397 AAAAGATAATGTAAA TTATCAATA ATGA TATTGATAA TTCTTATCATTTAGT TERM 3023 2142382 - 2142403 + H 74 -7.5 -3.93819 | opp_overlap 2142371 2142382 2142397, overlap 2142398 AAAAGATAATGTAAA TTATCAATA ATGA TATTGATAA TTCTTATCATTTAGT TERM 3024 2142670 - 2142652 - g 75 -9.6 -3.33884 | overlap 2142650 TTCAAAACACCAACA CAGGAAGA GAA TCTTCCCG CCAACAAAGAAAGTC TERM 3025 2143543 - 2143525 - g 74 -3.9 -5.16841 | overlap 2143527 TCAGATGAACAAAAA TCTGTTG ATTTA CAACAAA AACGGAAAGTAAATA hxuB 2142475 - 2144169 + | heme/hemopexin-binding protein B, hemolysin activation/secretion protein TERM 3026 2146523 - 2146499 - g 77 -7.9 -4.21768 | CAATTAACCTGAAAA GCCATCAAGGT TAT ACGTTGATGAC AGATAAAAATGCAAC hxuA 2144185 - 2147106 + | heme/hemopexin-binding protein A (Heme:hemopexin utilization protein A) TERM 3027 2147155 - 2147172 + T 100 -11.3 -5.24129 | opp_overlap 2147155 GAATACATAAAAAAA TCCACGC ATTT GCGTGGA TTTTTTATCAGAGAG TERM 3028 2147172 - 2147155 - T 100 -11.3 -5.80248 | opp_overlap 2147155 GAATACATAAAAAAA TCCACGC ATTT GCGTGGA TTTTTTATCAGAGAG pykA 2148631 - 2147192 - | pyruvate kinase TERM 3029 2147432 - 2147448 + g 73 -8.7 -3.70039 | ATAGATTGGTAAGCC TGAGCTG ATA CGGCTCA TTAATTTTGCGGTTT TERM 3030 2147509 - 2147497 - G 73 -7.7 -3.91032 | opp_overlap 2147466 2147496 2147497 CAATGATTGCAGAAA CACCT TCA AGGTG GTTTGCGGTGTACAT sixA 2148759 - 2149250 + | phosphohistidine phosphatase TERM 3031 2149691 - 2149676 - g 71 -4.8 -4.62069 | TGCTGATGGTAAAAA TACAAA ACAA TTTGTA CCATTTATGCTTATT uhpT 2149398 - 2150762 + | sugar phosphate antiporter TERM 3032 2150804 - 2150783 - f 100 -13.1 -4.0342 | opp_overlap 2150783 2150800 2150801 GCTAAGTAACAAGAA TACGGTGGA CTTT TCCACCGTA TTTTTTATAGAAATA TERM 3033 2150783 - 2150804 + F 100 -13.1 -5.252 | opp_overlap 2150783, overlap 2150800 2150801 GCTAAGTAACAAGAA TACGGTGGA CTTT TCCACCGTA TTTTTTATAGAAATA TERM 3034 2152592 - 2152579 - g 81 -2.5 -5.67283 | opp_overlap 2152579 AATTGAAATAAAAAA TAATA TACA TATTA TTATTACAGATAACG uhpB 2151416 - 2152723 + | sensory histidine kinase UhpB/signal transduction histidine kinase, glucose-6-phosphate specific TERM 3035 2152849 - 2152874 + T 70 -5.5 -4.46105 | GCTAGCAATCGTGGT CCAATGGCA TTGTTATT TGCTATTGG TATTTTTTTCTCCAT TERM 3036 2153302 - 2153316 + T 90 -7.1 -5.08601 | opp_overlap 2153302 ACGGATAATAAAAAA GTGGC TTAGC GCCAC TTTTTATTAGAATAA TERM 3037 2153316 - 2153302 - T 100 -7.1 -5.56673 | opp_overlap 2153302 ACGGATAATAAAAAA GTGGC TTAGC GCCAC TTTTTATTAGAATAA pfkA 2154288 - 2153323 - | 6-phosphofructokinase I nifS 2155606 - 2154410 - | cysteine desulfurase, aminotransferase, class V TERM 3038 2154469 - 2154455 - G 74 -4.2 -5.03145 | opp_overlap 2154466 2154467, overlap 2154465 TAATGCGGTAAAAAA GCGG TCAAGAT CCGC TTGCACATTGTAATG HAPS_2190 2156292 - 2155603 - | putative micrococcal nuclease (thermonuclease)-like protein TERM 3039 2156560 - 2156539 - g 91 -10.9 -4.64861 | gap 1 TTGCTTTAAAAGAAA GCGGCAG-TG TTT CAGCTGCCGC CAAATGTATTCATTT TERM 3040 2156992 - 2157033 + G 89 -11.8 -3.54424 | opp_overlap 2156990 2157014, overlap 2156990 TTTCTTATGAAATGG TTGCTATTTGTGCCAAAG ATCACC CTTTGGCACAAAAAGAAA TTTGGGAAGCTGAAG metR 2156481 - 2157407 + | LysR family transcriptional regulator pepQ 2158800 - 2157478 - | Xaa-Pro dipeptidase TERM 3041 2158526 - 2158513 - G 78 -3.7 -5.1861 | opp_overlap 2158512, overlap 2158502 2158499 2158514 CTCATCAGCAAAAAA TGCCG ATGT CGGCG GATTTGGCGTACAAT TERM 3042 2158975 - 2158990 + G 71 -4 -4.95896 | gap 1, opp_overlap 2158975 ACGATCCTGCAACTA CTCGTGA TAT TC-CGAG TTTTTGTCAATTTAT sirA 2158836 - 2159084 + | cell developmental protein SirA, sulfurtransferase/redox protein, regulator of disulfide bond formation HAPS_2194 2160602 - 2159070 - | methyltransferase type 11 HAPS_2195 2161105 - 2160683 - | hypothetical protein engB 2161739 - 2161110 - | GTPase EngB TERM 3043 2161889 - 2161870 - R 76 -7.8 -4.03179 | overlap 2161862 2161871 GATATTACAACGAAA CGGTGGGT CAAG ACCCACCC TACAATTATTTAAAT TERM 3044 2161888 - 2161871 - R 79 -11.3 -3.01184 | overlap 2161862 2161870 ATATTACAACGAAAC GGTGGGT CAAG ACCCACC CTACAATTATTTAAA HAPS_2197 2162311 - 2161895 - | possible membrane protein pepN 2164920 - 2162311 - | aminopeptidase N dapE 2165671 - 2164988 - | succinyl-diaminopimelate desuccinylase with a TIM-barrel fold kdsC 2165739 - 2166278 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase/low specificity phosphatase (HAD superfamily) orn 2166363 - 2166869 + | oligoribonuclease TERM 3045 2166997 - 2166974 - g 71 -3.8 -4.95876 | AATCATAATGAAAAA TCCGTTGTGA TTTA TCTAAACGGA GAATTAGGGGCTGGA HAPS_2202 2166875 - 2167363 + | predicted ATPase or kinase TERM 3046 2168241 - 2168231 - g 89 -5.4 -5.50925 | AAGGAAGATAAAAAA GCTA AAG TAGC GGTGACTTCGCCTAA amiB 2167373 - 2168485 + | N-acetylmuramoyl-L-alanine amidase TERM 3047 2168591 - 2168572 - f 85 -7.2 -4.92385 | GATATTTAAAGAAAA GCCGATTA TTTC TAATCAGC ACGGAGCATTAGTGA TERM 3048 2168768 - 2168788 + G 78 -7.6 -4.33928 | CGCTGGATGATTATT TATGCCGT ATTTA GCGGCATA TTTATATTTCCCGTA TERM 3049 2169117 - 2169129 + G 72 -9.1 -3.37236 | TTATCTTTGTTTATC TCGCC TTA GGCGA TTATGGCATTAGCTT HAPS_2204 2168606 - 2169265 + | sugar phosphate permease, required for N-linked glycosylation HAPS_2205 2169894 - 2169289 - | hypothetical protein TERM 3050 2170365 - 2170353 - g 73 -7.7 -3.94933 | opp_overlap 2170352, overlap 2170351 GGAAGGTGAAAAATA TGGTG CAA CACCA CTACTTCGCCCTGCT neuA 2170291 - 2170845 + | acylneuraminate cytidylyltransferase/CMP-N-acetylneuraminic acid synthetase TERM 3051 2171771 - 2171782 + G 72 -4.4 -4.68994 | opp_overlap 2171771 AGATTTGCTGAAAAC GAGT GGCT ACTC TTTTTAGATGATGAT lsgE 2171540 - 2172424 + | putative lipooligosaccharide galactosyltransferase involved in cell wall biogenesis lsgF 2172424 - 2173224 + | putative UDP-galactose--lipooligosaccharide galactosyltransferase TERM 3052 2173305 - 2173267 - T 100 -13.6 -5.27335 | opp_overlap 2173267 TTTTTCAAATAAAAA TAGTTGCTAATATTTA GAGAAAA TAAATATTAGCAACTA TTTTGTCTACCATGC TERM 3053 2173267 - 2173305 + T 100 -13.6 -4.54047 | opp_overlap 2173267 TTTTTCAAATAAAAA TAGTTGCTAATATTTA GAGAAAA TAAATATTAGCAACTA TTTTGTCTACCATGC ccmF 2175293 - 2173353 - | cytochrome c-type biogenesis protein CcmF TERM 3054 2175048 - 2175072 + g 70 -7.9 -3.62046 | opp_overlap 2175041, overlap 2175054 AGCAGAAAGGCGATA CTCTAACGGTA ACG TACTGTTTGAG TTATTCACCACATAC ccmE 2175823 - 2175290 - | cytochrome c-type biogenesis protein CcmE TERM 3055 2176338 - 2176307 - R 100 -13.2 -3.98204 | opp_overlap 2176307, overlap 2176295 2176310 AAATATAGGTAGAAA TAACCGCACCTTAT TGTT ATAAGTTGCGGTTA TTTTTTGCTACTTAT TERM 3056 2176307 - 2176338 + r 100 -13.2 -5.22794 | opp_overlap 2176295 2176307 2176310 AAATATAGGTAGAAA TAACCGCACCTTAT TGTT ATAAGTTGCGGTTA TTTTTTGCTACTTAT TERM 3057 2176335 - 2176310 - R 89 -10.5 -4.10188 | opp_overlap 2176307, overlap 2176307 2176295 TATAGGTAGAAATAA CCGCACCTTAT TGTT ATAAGTTGCGG TTATTTTTTGCTACT pntB 2177723 - 2176350 - | NAD(P) transhydrogenase beta subunit TERM 3058 2176391 - 2176410 + g 74 -4.4 -4.86731 | gap 1 CACGTTCTTTCGCAT CAC-CAAAT AAC ATTTGAGTG TTTTCTTTGAAGAAC TERM 3059 2176601 - 2176620 + g 70 -9.4 -2.72152 | opp_overlap 2176589 2176584, overlap 2176599 2176597 CTACGTCAGTATCTG CGAAATCA TCAT TGATTTCG TCCATTTCTAATACG pntA 2179267 - 2177735 - | NAD(P) transhydrogenase subunit alpha TERM 3060 2178102 - 2178121 + g 76 -3.5 -5.20333 | TTTTCTTCTTTTTTC TCCGCAG GTTTTG CTGCCGA TTTTTGTTGTGGCTG HAPS_2214 2179319 - 2179438 + | hypothetical protein mreB 2179546 - 2180598 + | rod shape-determining protein MreB/actin-like ATPase involved in cell morphogenesis TERM 3061 2180626 - 2180651 + F 83 -9.1 -4.35524 | opp_overlap 2180626 TTATTAGCATAAAAA TGGACAATATC AACG GCTATTGTCCA TTTTGCATTTAACAA TERM 3062 2180651 - 2180626 - f 100 -9.1 -4.93296 | opp_overlap 2180626 TTATTAGCATAAAAA TGGACAATATC AACG GCTATTGTCCA TTTTGCATTTAACAA TERM 3063 2180957 - 2180939 - g 71 -6 -4.24149 | opp_overlap 2180938 GTATTAAAAGAACAA CTGCGT GAAAAGA ACGCAG ACTTATTGCTACTCG mreC 2180792 - 2181739 + | rod shape-determining protein MreC/Cell shape-determining protein mreD 2181739 - 2182227 + | rod shape-determining protein MreD/Cell shape-determining protein TERM 3064 2182811 - 2182791 - g 71 -4 -4.88407 | opp_overlap 2182792 2182793, overlap 2182793 CTAGGTAATGAAAAA CTCATCAT TCAAG ATGATGTG CTTCAACTGCTGGCG rarA 2182227 - 2183570 + | recombination factor protein RarA HAPS_2219 2185033 - 2183573 - | possible outer membrane protein/FOG: TPR repeat protein TERM 3065 2183906 - 2183927 + g 82 -11.7 -3.07935 | opp_overlap 2183905 2183904 ATTGTAGTTTAAATT TGCAAACCA ATAT TGGTTTGCA TTGGCTAAATAAACT TERM 3066 2184437 - 2184452 + g 79 -9 -3.92522 | overlap 2184428 GCCACCCGAAAACGT CCAACG ATCT CGTTGG TTTATCGCATTAAGA TERM 3067 2184611 - 2184585 - G 77 -9.4 -3.60971 | opp_overlap 2184592 ACCGCAAGTTGTAAA CGAACAGGCTGA ATA TCTGCTTGTTCG GCAAGGATCTGACGA tonB 2185170 - 2185973 + | periplasmic protein, links inner and outer membranes TERM 3068 2186038 - 2186048 + G 73 -5.4 -4.51174 | TATTGTACTTTCCAT TTCC TTT GGAA TTTTAGTTGTAATGA exbB 2185991 - 2186659 + | biopolymer transport ExbB protein exbD 2186734 - 2187069 + | biopolymer transport ExbD protein tbpB 2187280 - 2188740 + | transferrin-binding protein 2 precursor TERM 3069 2190200 - 2190189 - g 73 -5.8 -4.52589 | TCTCGTTAGATAAAA CCGT ACAA ACGG GATTGGGCAAACATC tbpA 2188754 - 2191456 + | transferrin-binding protein 1 precursor TERM 3070 2191490 - 2191525 + T 74 -4.9 -4.87665 | gap 1, opp_overlap 2191490 ATAAATTTGTGTAAA TACCTGTTTCTGTGAT AATAC ATC-TAGATACAGGTA TTTTTATAGGTGAGC TERM 3071 2191759 - 2191788 + T 73 -9.3 -2.75963 | overlap 2191758 2191762 CAGCCAGCTTATTGA TTTTGGTGATCGC CTAA GCGACCACCATAA GTTTAAAATGAAGAT TERM 3072 2191762 - 2191785 + T 78 -11 -2.65354 | overlap 2191759 2191758 CCAGCTTATTGATTT TGGTGATCGC CTAA GCGACCACCA TAAGTTTAAAATGAA HAPS_2225 2192203 - 2191877 - | sigma 54 modulation protein HAPS_2226 2192377 - 2192688 + | hypothetical protein TERM 3073 2193305 - 2193332 + G 93 -10 -5.0538 | gap 1 TCCCGATCACGATTA CGGACGCAAAAAC AGC GTTTTTGTG-CCG TTTTTTGCGGTGAAA lpxL 2192688 - 2193623 + | lipid A biosynthesis lauroyl acyltransferase TERM 3074 2194261 - 2194248 - g 79 -6.7 -4.57569 | CTATCCGCCTAAAAA CTGCA CCTT TGCAG AACTTGAAACTGTTG orfM 2193799 - 2194338 + | putative deoxyribonucleotide triphosphate pyrophosphatase/Xanthosine triphosphate pyrophosphatase HAPS_2229 2194346 - 2194531 + | hypothetical protein HAPS_2230 2194531 - 2194986 + | hypothetical protein uvrB 2197046 - 2195031 - | excinuclease ABC subunit B TERM 3075 2195409 - 2195425 + g 72 -9.4 -2.9732 | TTTGCCGTTGAGGTT TCGGGC AGCAC GCCCGA TGGTTTGGATTAAAG TERM 3076 2196051 - 2196039 - G 72 -9.1 -3.33573 | opp_overlap 2196038 ATCAATAATCAGCAA GCCGT CAG ACGGC ATATAGTCAAACAAG TERM 3077 2196070 - 2196086 + g 93 -11.5 -4.37886 | TAGTCAAACAAGGTC GGGGGCG GTT CGCCCTC TTTTCTGCCCGATAA TERM 3078 2199761 - 2199773 + G 71 -6.3 -4.17958 | opp_overlap 2199769 AGGAAGAACAGGCGA TGTTG AAA CAACA TTTGTTGGCGATGTT glnD 2197225 - 2199801 + | uridylyltransferase sapC 2200002 - 2200775 + | peptide transport system permease protein sapD 2200788 - 2201819 + | peptide transport system ATP-binding protein TERM 3079 2202121 - 2202135 + G 82 -6.4 -4.84642 | opp_overlap 2202120, overlap 2202122 TGTTGAAGCAGAAGT TCACCT TGA AGGTGG TTTTGTTGGTTTAGC eno 2202047 - 2203357 + | phosphopyruvate hydratase/enolase TERM 3080 2203381 - 2203404 + F 91 -9.6 -4.4595 | opp_overlap 2203381 GATTTATTGAATATA GCCACCTTGA GAAA TTGAGGTGGC TTTTGGCTTTTATCA HAPS_2236 2203727 - 2204218 + | nucleotide-binding protein parE 2204336 - 2206237 + | DNA topoisomerase 4 subunit B TERM 3081 2207307 - 2207291 - g 90 -9.5 -4.4715 | CCGCAATCCACAAAA CTACTTC GCA GAAGTAG AGCAAGCAGCGTTTG TERM 3082 2207776 - 2207752 - g 70 -5.7 -4.40003 | overlap 2207753 TCGTAGAAAGACAAA TGGCTCACTTT GAA AAAGTTAGCCC GGAATTAGCAAATGC TERM 3083 2207775 - 2207753 - g 70 -9.2 -3.23279 | overlap 2207752 CGTAGAAAGACAAAT GGCTCACTTT GAA AAAGTTAGCC CGGAATTAGCAAATG hktE 2206368 - 2207816 + | catalase TERM 3084 2207867 - 2207887 + F 100 -11.1 -5.7946 | TTTGCTATACTTTAA GCCCAGCCG TTT TGGTTGGGC TTTTTTTCTTGGAAA TERM 3085 2208783 - 2208767 - g 76 -7.3 -4.19177 | ACCGCCCAACACAAA TTGAGCA ACA CGCTCAA CTGCCTATTGATATT HAPS_2239 2207911 - 2208996 + | phosphohydrolase HAPS_2240 2209515 - 2209069 - | hypothetical protein TERM 3086 2209488 - 2209500 + g 80 -6.3 -4.80882 | ATTTCCAACTTGCTT CTTGA ATT TCAAG TTTTTGGTATCGCAT TERM 3087 2210913 - 2210898 - g 77 -6.2 -4.5442 | opp_overlap 2210896 2210898 GCGTTAATCAGAAAA TTGAAG GCTT CTTCAA TGTTTGTGAAGCAAG lonH 2209592 - 2211226 + | possible S16 family lon protease, ATP-dependent protease fabA 2211347 - 2211877 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 3088 2211936 - 2211966 + F 100 -15 -3.4582 | opp_overlap 2211939, overlap 2211939 AATCCTTTCAACATC TAATATCTCTCTCA CTT TGGGAGAGATATTA TGTTTCGTGCGATCA TERM 3089 2211939 - 2211963 + F 93 -12.3 -3.86252 | opp_overlap 2211939, overlap 2211936 CCTTTCAACATCTAA TATCTCTCTCA CTT TGGGAGAGATA TTATGTTTCGTGCGA TERM 3090 2211963 - 2211939 - f 77 -10.1 -3.1855 | opp_overlap 2211939 2211936 CCTTTCAACATCTAA TATCTCTCTCA CTT TGGGAGAGATA TTATGTTTCGTGCGA TERM 3091 2212235 - 2212276 + GF 76 -9.1 -3.64198 | gap 1, overlap 2212238 TAAACAGATCGCTTG TAACTGTTT-GAATATCGCA AGT TGTGATATTCAAAAAAGTTA TTATCTCTATCAAAC pulG 2211966 - 2212475 + | Type II secretory pathway, pseudopilin PulG HAPS_2244 2212441 - 2213136 + | hypothetical protein HAPS_2245 2213133 - 2213792 + | hypothetical protein TERM 3092 2213889 - 2213905 + G 71 -5.2 -4.56597 | opp_overlap 2213882 2213889 GCAACATACGCAAAA TAAGCA AAGCG TGCTTA TTTTTCAGCAACAGC HAPS_2246 2213785 - 2214081 + | hypothetical protein TERM 3093 2216461 - 2216409 - T 85 -12.3 -2.94934 | opp_overlap 2216414, overlap 2216414 ATAAAATGACAATGA GTAAAGTTATGTCTATCCCTATCTG GTA CAATAAAGGATAGACATAACTTTAA GTGCTATTTAATAGA TERM 3094 2216456 - 2216414 - T 93 -12.2 -3.87346 | opp_overlap 2216414, overlap 2216409 ATGACAATGAGTAAA GTTATGTCTATCCCTATCTG GTA CAATAAAGGATAGACATAAC TTTAAGTGCTATTTA TERM 3095 2216414 - 2216456 + T 74 -8.1 -3.72678 | opp_overlap 2216414 2216409 ATGACAATGAGTAAA GTTATGTCTATCC-CTATCTG GTA CA-ATAAAGGATAGACATAAC TTTAAGTGCTATTTA norM 2217856 - 2216465 - | Drug:Na+ antiporter (norfloxacin, ethidium, kanamycin, ciprofloxin, streptomycin efflux pump) TERM 3096 2216553 - 2216540 - G 85 -6.7 -5.06735 | CATAAAGTAGAAAAA TAGCC CTGC GGCTA AACTTAAGCAGACAC rluA 2218579 - 2217869 - | pseudouridylate synthase, 23S RNA-specific TERM 3097 2219427 - 2219410 - g 78 -4.2 -5.24129 | CTTGTTGATAAAAAA TTTGGT GACGGT ACCAAA GAGAAAGTCAAAGCG phnD 2218699 - 2219574 + | phosphate/phosphonate ABC transport system periplasmic phosphonate-binding protein TERM 3098 2219617 - 2219641 + F 81 -7.1 -4.59342 | overlap 2219618 2219619 TGCCAAATCTCCCCT AGCCCCTCTTT GCT AAAGAGGGGAA TTTGTTTATCGTAAA TERM 3099 2219618 - 2219640 + F 80 -10.6 -3.34882 | overlap 2219617 2219619 GCCAAATCTCCCCTA GCCCCTCTTT GCT AAAGAGGGGA ATTTGTTTATCGTAA TERM 3100 2219619 - 2219639 + F 93 -14.1 -2.60206 | overlap 2219618 2219617 CCAAATCTCCCCTAG CCCCTCTTT GCT AAAGAGGGG AATTTGTTTATCGTA phnC 2219840 - 2220592 + | phosphate/phosphonate ABC transporter ATPase component phnE 2220582 - 2221367 + | phosphate/phosphonate ABC transport system permease protein phnE 2221364 - 2222212 + | phosphate/phosphonate ABC transport system inner membrane subunit HAPS_2254 2222274 - 2222966 + | hypothetical protein nudH 2223516 - 2224118 + | dinucleoside polyphosphate hydrolase TERM 3101 2224154 - 2224164 + G 72 -3.2 -5.01732 | TGCTTGATTTTAGGC TCAG TTG CTGG TTTTTTAGCAGGGTT HAPS_2256 2224115 - 2224912 + | permease lgt 2224922 - 2225725 + | prolipoprotein diacylglyceryl transferase ybfE 2225922 - 2226215 + | LexA regulated protein TERM 3102 2226287 - 2226275 - g 74 -4.9 -4.74013 | overlap 2226270 2226268 TGGAAACACAGAAAA CATTT CTA AAATG ATTCAAAAACAACTA fldA 2226225 - 2226749 + | flavodoxin fur 2226769 - 2227215 + | ferric uptake regulation protein TERM 3103 2227296 - 2227242 - f 100 -14.7 -4.23045 | gap 2, opp_overlap 2227245 2227249, overlap 2227247 2227249 CAATGAGTTAATAAA CACAAG--AGCGGTGAGATTTCGCAAA CCT TTTGCAAAATCTCGCCGCTTGCTTGTA TTTAAAAGTGATAAA TERM 3104 2227245 - 2227291 + F 93 -12.4 -3.82202 | opp_overlap 2227242 2227247 2227249, overlap 2227249 TGAGTTAATAAACAC AAGAGCGGTGAGATTTCGCAAA CCT TTTGCAAAATCTCGCCGCTTGC TTGTATTTAAAAGTG TERM 3105 2227289 - 2227247 - f 100 -17.2 -3.97444 | opp_overlap 2227245 2227249, overlap 2227242 2227249 AGTTAATAAACACAA GAGCGGTGAGATTTCGCAAA CCT TTTGCAAAATCTCGCCGCTT GCTTGTATTTAAAAG TERM 3106 2227249 - 2227287 + F 100 -19.8 -3.58428 | opp_overlap 2227249 2227247 2227242, overlap 2227245 TTAATAAACACAAGA GCGGTGAGATTTCGCAAA CCT TTTGCAAAATCTCGCCGC TTGCTTGTATTTAAA TERM 3107 2227287 - 2227249 - f 100 -19.8 -3.56559 | opp_overlap 2227245 2227249, overlap 2227247 2227242 TTAATAAACACAAGA GCGGTGAGATTTCGCAAA CCT TTTGCAAAATCTCGCCGC TTGCTTGTATTTAAA TERM 3108 2227966 - 2227920 - g 89 -9.6 -4.29302 | opp_overlap 2227928 TCCAGATCAAAAGAA TGTCGAAATTGACGTAGTTATT GAT AAAAAATACGCCAATCTCGTCA AAAAAGAAAGTCGCT TERM 3109 2229706 - 2229694 - g 70 -9.1 -3.18274 | opp_overlap 2229695 CTCAGTTTAAGCGAA CTCGG CGA CCGAG TGCTGATCCATTTAC pqiB 2227312 - 2229978 + | paraquat-inducible protein B TERM 3110 2230141 - 2230105 - g 100 -15.3 -4.59511 | opp_overlap 2230105 2230107, overlap 2230107 AATAGTTGCTAAAAA GTGGCTTAAAGCCCTAT ACT ACAAGGCTTTAAGCCTC TTTTTGAAATATGAA TERM 3111 2230105 - 2230141 + G 91 -10.9 -4.64766 | opp_overlap 2230105 2230107, overlap 2230107 AATAGTTGCTAAAAA GTGGCTTAAAGCCCTAT ACT ACAAGGCTTTAAGCCTC TTTTTGAAATATGAA TERM 3112 2230107 - 2230139 + G 91 -12.1 -3.93817 | opp_overlap 2230105 2230107, overlap 2230105 TAGTTGCTAAAAAGT GGCTTAAAGCCCTAT ACT ACAAGGCTTTAAGCC TCTTTTTGAAATATG TERM 3113 2230139 - 2230107 - g 100 -16.5 -2.60508 | opp_overlap 2230107 2230105, overlap 2230105 TAGTTGCTAAAAAGT GGCTTAAAGCCCTAT ACT ACAAGGCTTTAAGCC TCTTTTTGAAATATG HAPS_2262 2230025 - 2230186 + | hypothetical protein HAPS_2264 2230669 - 2231322 + | IS1016C2 transposase, family IS1595 TERM 3114 2231686 - 2231673 - g 71 -5.3 -4.64657 | opp_overlap 2231665 CTAAACCTCTAAAAA TTGGA CTTT TCCAA GATTTAGTTGAAGCG TERM 3115 2231982 - 2231966 - g 93 -8.7 -5.27335 | TTCTTTAAACAAAAA GCACGTG AAG CACATGC CAAAAAACGGGCTGA TERM 3116 2232025 - 2232015 - g 70 -3.2 -4.84182 | CGAAAAAACAAGAAA TGCC AAA AGCA TCTTTAGAAAGTTTG proQ 2231543 - 2232079 + | putative solute/DNA competence effector, activator of osmoprotectant transporter ProP TERM 3117 2234012 - 2233998 - g 70 -2.8 -5.15969 | overlap 2234000 2234002 CGCGAAGGTAAAAAA CAGATC AAA GATCTT GAACAGTTACCAAAA prc 2232099 - 2234105 + | S41 family carboxy-terminal protease/periplasmic protease TERM 3118 2234133 - 2234157 + F 93 -12.2 -4.31737 | TAATGTGGAAGTTTA TCAGGCCGCT GTTTA AGCGGTCTGA TTTATTACTCATTTT HAPS_2267 2234191 - 2235741 + | hypothetical protein HAPS_2268 2235886 - 2236443 + | hypothetical protein HAPS_2269 2236457 - 2237086 + | glyoxalase II family protein vacJ 2237091 - 2237837 + | VacJ lipoprotein TERM 3119 2237885 - 2237926 + F 95 -11.8 -4.65263 | opp_overlap 2237899 2237910, overlap 2237886 AAAATTCCTATTGAC ACTGTGTGTTTAAACAGT AAAATA ACTGTATAAACACACAGA TTTATTTTAGAGGAT TERM 3120 2237886 - 2237925 + F 100 -15.3 -3.38435 | opp_overlap 2237899 2237910, overlap 2237885 AAATTCCTATTGACA CTGTGTGTTTAAACAGT AAAATA ACTGTATAAACACACAG ATTTATTTTAGAGGA impA 2237946 - 2238380 + | SOS-response transcriptional repressor TERM 3121 2238468 - 2238453 - T 70 -2.6 -5.08824 | overlap 2238455 TTTTTATTTAAAAAA TCTTGT ATAA ACAAAA TATTACGCCTTTTTG TERM 3122 2238870 - 2238906 + T 100 -21.9 -4.56775 | opp_overlap 2238870 TATATTTCAAAAAAA GTGGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCCAC TTTTTAGCAACAAAT TERM 3123 2238906 - 2238870 - T 100 -19.7 -5.45726 | opp_overlap 2238870 TATATTTCAAAAAAA GTGGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCCAC TTTTTAGCAACAAAT metB 2240045 - 2238939 - | cystathionine gamma-synthase TERM 3124 2239351 - 2239338 - G 70 -8.1 -3.63305 | CATATAAGCGTCAAA CGGTG AAAG CACCG CCCCAGCACCATTTT dapB 2240905 - 2240093 - | dihydrodipicolinate reductase TERM 3125 2240119 - 2240138 + g 81 -5.8 -5.04868 | gap 1, opp_overlap 2240114 2240110 TTAAATCCAACACAT CGGTCATAT CAA ATA-GACCG TTTTGTTTGGTTTGA TERM 3126 2241024 - 2240997 - R 75 -10.6 -2.56391 | overlap 2241001 AGCATCCAAATAGAG CAAACCCGATCC GTGA AGATCGGGTTAG GCTATCGCAAATCGC TERM 3127 2241020 - 2241001 - R 85 -10 -3.97308 | overlap 2240997 TCCAAATAGAGCAAA CCCGATCC GTGA AGATCGGG TTAGGCTATCGCAAA metF 2241921 - 2241040 - | 5,10-methylenetetrahydrofolate reductase TERM 3128 2241240 - 2241251 + g 72 -4.4 -4.77925 | TCCAGCTAGGGATTT TCAC ATTA GTGA TTTTTGCCATTTTTT TERM 3129 2243068 - 2243080 + G 74 -4.1 -5.00884 | overlap 2243054 TCATCATCAAAGATT GCATT GCT GATGC TTTTTTACAAGAAAT icd 2242233 - 2243480 + | isocitrate dehydrogenase (NADP(+)) TERM 3130 2244089 - 2244102 + G 79 -5.3 -5.00895 | overlap 2244085 TATTAACCTCTTGGG CCAAT GCCG ATTGG TTTTTATCTCGTCCA TERM 3131 2244458 - 2244478 + G 78 -2.6 -5.47218 | gap 1, overlap 2244460 CTGGCGGTGTGGTAT TAGGCGGTA AGAT TGCC-CCTA TTTTTTTCAATACGA TERM 3132 2244907 - 2244882 - g 70 -9.7 -2.62184 | overlap 2244884 2244889 TGTTGGCTCACAGGA CACCACAGGCC CAAT GACCCGTGATG AGCTTAAAGATCTCG TERM 3133 2245429 - 2245454 + G 72 -8.9 -3.3334 | opp_overlap 2245410 TTTGAACTTTCAGAT GCCTCAGCCGA ACGT TCTGCTGCGGC TTGTACCATCAAATT acnB 2243632 - 2246235 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase gltA 2246271 - 2247551 + | type II citrate synthase TERM 3134 2247569 - 2247602 + T 100 -11.2 -4.9755 | opp_overlap 2247569 AAACGTTGAGATAAA TAGTTGCTAAGATC GTATTG GTTCTTAGCAACTA TTTTTGATTCTATAT TERM 3135 2247602 - 2247569 - T 89 -11.2 -4.05322 | opp_overlap 2247569 AAACGTTGAGATAAA TAGTTGCTAAGATC GTATTG GTTCTTAGCAACTA TTTTTGATTCTATAT adk 2248217 - 2247630 - | adenylate kinase HAPS_2280 2249742 - 2248384 - | predicted Na+-dependent transporters of the SNF family TERM 3136 2248543 - 2248521 - G 87 -8.4 -4.5528 | CAAAACCAACGAAAA TCGCACTGCC GAG AGCAGTGAGA ATAAATAAAATATTA TERM 3137 2249473 - 2249493 + g 73 -7.6 -4.13767 | GATTTTCCACGCAGG GTGAATGG CTTTA CCATTCGC TTTTCCCGTAAAGGC dam 2250589 - 2249771 - | DNA adenine methylase Dam TERM 3138 2249837 - 2249848 + g 89 -4.4 -5.54079 | TTGACCGATGTGACG CTGA ACTT TCAG TTTTTTGATTTTTGC aroB 2251576 - 2250599 - | 3-dehydroquinate synthase TERM 3139 2251113 - 2251103 - G 74 -4 -5.10497 | overlap 2251094 AAGCCATTCAAAAAA TTGA ATA TCAA AAATTGCACCATATT TERM 3140 2251401 - 2251412 + g 86 -4.4 -5.44721 | opp_overlap 2251401 GCAATTAATACCGAA TCAC GATT GTGA TTTTTTTCAAGTAAT aroK 2252223 - 2251702 - | shikimate kinase TERM 3141 2251845 - 2251866 + g 80 -4.4 -5.27923 | overlap 2251840 2251847 ACGTTTGATATGGAT CTTCCGTT TGCAAT AACGGACG TTTTTTATCACGTTG TERM 3142 2252277 - 2252314 + r 100 -15.8 -3.273 | opp_overlap 2252282, overlap 2252282 TTGTGAATTTTTAGA AAAAACAGACCGCTTG CACATA CAAGCGGTCTGTTTTA TGTTGAATTTTGTAA TERM 3143 2252282 - 2252309 + r 100 -15.7 -4.71234 | opp_overlap 2252282, overlap 2252277 AATTTTTAGAAAAAA CAGACCGCTTG CACATA CAAGCGGTCTG TTTTATGTTGAATTT TERM 3144 2252309 - 2252282 - R 100 -16.4 -5.25803 | opp_overlap 2252282 2252277 AATTTTTAGAAAAAA CAGACCGCTTGC ACAT ACAAGCGGTCTG TTTTATGTTGAATTT TERM 3145 2252417 - 2252391 - R 70 -8.9 -2.95598 | gap 1, opp_overlap 2252374 2252372 2252388 2252391, overlap 2252374 2252390 2252388 GCCCAAAATAAAGAT GGGCGATATTAT CTCA ATAA-ATCGCCC TACTTTTCAACTGGA TERM 3146 2252391 - 2252417 + r 70 -8.9 -3.09831 | gap 1, opp_overlap 2252374 2252391 2252390 2252388, overlap 2252374 2252372 2252388 GCCCAAAATAAAGAT GGGCGATATTAT CTCA ATAA-ATCGCCC TACTTTTCAACTGGA mrcA 2255008 - 2252453 - | membrane carboxypeptidase/penicillin-binding protein 1A TERM 3147 2254000 - 2254010 + g 75 -5.4 -4.71426 | GCAATTTGCTTAAGT GATC GAT GATC TTTTCTTCGTCCCAC comA 2255162 - 2255839 + | competence protein A HAPS_2286 2255815 - 2256336 + | hypothetical protein TERM 3148 2256419 - 2256434 + G 75 -2.6 -5.2204 | opp_overlap 2256410 2256405, overlap 2256410 CCAAAATAAAGGATT TATTCT ATCG GGAATA TTTTTATTGATTGTG TERM 3149 2256453 - 2256466 + G 71 -5.3 -4.63863 | TTATTGATTGTGGCA TTTCC AGTA GGAAA TTATTTTTATCTTAA HAPS_2287 2256333 - 2256863 + | chromosome segregation ATPase HAPS_2288 2256863 - 2257249 + | hypothetical protein comE 2257259 - 2258521 + | competence protein E/type II secretory pathway, component HofQ nusB 2258600 - 2259013 + | transcription antitermination protein N utilization substance B (NusB) thiL 2259022 - 2259990 + | thiamin-monophosphate kinase pgpA 2260107 - 2260463 + | phosphatidylglycerophosphatase A rhtB 2260465 - 2261094 + | threonine efflux protein, RhtB family homoserine/threonine resistance transporter trxA 2261391 - 2261705 + | thioredoxin TERM 3150 2261792 - 2261759 - T 80 -11.1 -3.20858 | opp_overlap 2261761, overlap 2261761 GAGTATAGCTATTAA CATCTCACGGTTAGA TTGC TCTGACCGTGAGATT AATAGCAGACATTAA TERM 3151 2261761 - 2261790 + T 100 -15.9 -3.14463 | opp_overlap 2261761 2261759 GTATAGCTATTAACA TCTCACGGTTAGA TTGC TCTGACCGTGAGA TTAATAGCAGACATT TERM 3152 2261790 - 2261761 - T 100 -13.7 -3.16492 | opp_overlap 2261761, overlap 2261759 GTATAGCTATTAACA TCTCACGGTTAGA TTGC TCTGACCGTGAGA TTAATAGCAGACATT TERM 3153 2261959 - 2261923 - T 100 -17.5 -4.56775 | opp_overlap 2261923 ATTTGTTGCTAAAAA GAGGCTTAACGCCTTAT AGT ACAAGGCTTTAAGCCTC TTTTTGAAATATTAA TERM 3154 2261923 - 2261959 + T 100 -15.3 -4.66953 | opp_overlap 2261923 ATTTGTTGCTAAAAA GAGGCTTAACGCCTTAT AGT ACAAGGCTTTAAGCCTC TTTTTGAAATATTAA TERM 3155 2262927 - 2262889 - T 84 -4.8 -5.27335 | opp_overlap 2262891, overlap 2262891 TTTTTTAAATAAAAA GAGTTGCTAACATTTA AAGAAAA TAAACATTAGCAACTG TTTTGTCCACTTGGT TERM 3156 2262925 - 2262891 - T 75 -7.4 -4.27026 | opp_overlap 2262891, overlap 2262889 TTTTAAATAAAAAGA GTTGCTAACATTTA AAGAAAA TAAACATTAGCAAC TGTTTTGTCCACTTG TERM 3157 2263023 - 2263042 + T 76 -9.2 -3.30124 | opp_overlap 2263015, overlap 2263024 AGAGTAATCATTTAT AGGTGGGG ATTC CCCCACCA TTATGAGAAATGAAA TERM 3158 2263024 - 2263041 + T 85 -12.7 -2.57931 | opp_overlap 2263015, overlap 2263023 GAGTAATCATTTATA GGTGGGG ATTC CCCCACC ATTATGAGAAATGAA TERM 3159 2263082 - 2263059 - T 71 -5.2 -4.63479 | opp_overlap 2263059 2263058 2263055 2263060, overlap 2263060 TATGAGAAATGAAAA GCCCCAAATC GAAA GGTTTGGGGG GTTGTTTTATCTTTG TERM 3160 2263060 - 2263081 + T 77 -10.9 -2.55085 | opp_overlap 2263059 2263060, overlap 2263059 2263058 2263055 ATGAGAAATGAAAAG CCCCAAATC GAAA GGTTTGGGG GGTTGTTTTATCTTT TERM 3161 2263081 - 2263060 - T 73 -8.7 -3.37003 | opp_overlap 2263060 2263059 2263058 2263055, overlap 2263059 ATGAGAAATGAAAAG CCCCAAATC GAAA GGTTTGGGG GGTTGTTTTATCTTT HAPS_2296 2263508 - 2263089 - | hypothetical protein TERM 3162 2263539 - 2263558 + r 78 -7.9 -4.19927 | opp_overlap 2263539, overlap 2263529 ATAGATAAAACAAAA GCCTGTT CAAATA AACAGGC TTTATGTATAATTTT TERM 3163 2263558 - 2263539 - R 100 -8.6 -5.24647 | opp_overlap 2263539 2263529 ATAGATAAAACAAAA GCCTGTTC AAAT AAACAGGC TTTATGTATAATTTT TERM 3164 2263628 - 2263656 + r 81 -8.1 -4.31412 | opp_overlap 2263610 2263627 2263628 GGATCTGCGAAAAAT CAGTCCGCCAG TAAGCAC CTAGCGGGCTG TTTTAGTAGATCTTT TERM 3165 2263656 - 2263628 - R 70 -8.1 -3.34716 | opp_overlap 2263628, overlap 2263610 2263627 GGATCTGCGAAAAAT CAGTCCGCCAG TAAGCAC CTAGCGGGCTG TTTTAGTAGATCTTT TERM 3166 2263786 - 2263810 + r 77 -2.8 -5.54907 | gap 1, opp_overlap 2263793, overlap 2263788 AGCAGTGAAACCGAG C-AGGAACGGT GACC GCCGTCCCTTG TTTTTATTTTATGCC TERM 3167 2263788 - 2263807 + r 75 -5.6 -4.82111 | opp_overlap 2263793, overlap 2263786 CAGTGAAACCGAGCA GGAACGGT GACC GCCGTCCC TTGTTTTTATTTTAT HAPS_2297 2266933 - 2263841 - | FAD/FMN-containing dehydrogenase TERM 3168 2267296 - 2267270 - H 78 -8.8 -3.67588 | opp_overlap 2267270 2267271 2267272, overlap 2267271 GAAAGCGTAGTTAAA GCCTTAGCGTAA TGA TTACGCTAAGAA TTTTGTTTAATTAGA TERM 3169 2267270 - 2267296 + H 82 -6.6 -4.99947 | opp_overlap 2267270 2267271, overlap 2267271 2267272 GAAAGCGTAGTTAAA GCCTTAGCGTAA TGA TTACGCTAAGAA TTTTGTTTAATTAGA TERM 3170 2267295 - 2267271 - H 84 -12.3 -2.80071 | opp_overlap 2267270 2267271 2267272, overlap 2267270 AAAGCGTAGTTAAAG CCTTAGCGTAA TGA TTACGCTAAGA ATTTTGTTTAATTAG TERM 3171 2267271 - 2267295 + H 80 -10.1 -3.58884 | opp_overlap 2267271 2267270, overlap 2267270 2267272 AAAGCGTAGTTAAAG CCTTAGCGTAA TGA TTACGCTAAGA ATTTTGTTTAATTAG TERM 3172 2267272 - 2267294 + H 93 -13.6 -2.74246 | opp_overlap 2267271 2267270, overlap 2267271 2267270 AAGCGTAGTTAAAGC CTTAGCGTAA TGA TTACGCTAAG AATTTTGTTTAATTA ompP5 2267336 - 2268451 + | outer membrane protein P5 precursor, heat-modifiable outer membrane protein TERM 3173 2268475 - 2268504 + T 100 -13.7 -3.28791 | opp_overlap 2268481, overlap 2268481 GAATCCAAGAAACTT AAAAAATGCCCGC AAAA GCGGGCATTTTTA TTATACCGAGAAACT TERM 3174 2268498 - 2268481 - T 100 -12.7 -5.25805 | opp_overlap 2268475 2268481 AAGAAACTTAAAAAA TGCCCGC AAAA GCGGGCA TTTTTATTATACCGA TERM 3175 2268481 - 2268498 + T 100 -12.7 -5.18726 | opp_overlap 2268481, overlap 2268475 AAGAAACTTAAAAAA TGCCCGC AAAA GCGGGCA TTTTTATTATACCGA msrB 2268928 - 2268533 - | methionine sulfoxide reductase B