TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.599347 %AT, 1447930 nt, 8739 terms. Intergenic: 0.672911 %AT, H2T: 146017 nt, 832 terms; T2T: 58419 nt, 947 terms; H2H: 44114 nt, 618 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|15611071|ref|NC_000921.1| Helicobacter pylori J99, complete genome (length 1643831) nusB 467 - 51 - | transcription antitermination protein NusB TERM 1 130 - 154 + g 72 -10.1 -2.64695 | overlap 129 GGGGTGTTAGGCTCA GCGTAGAGTTT GCC AAGCTCTATGC ATTCATTGATGATGA TERM 2 274 - 298 + g 83 -5.1 -5.24129 | TCTTTTAAATGCGGT TCGATGAGA GCGTCAA TCTCATTGA TTTTTTCTAACACGC ribH 939 - 469 - | riboflavin synthase subunit beta kdsA 1779 - 949 - | 2-dehydro-3-deoxyphosphooctonate aldolase icfA 2431 - 1766 - | carbonic anhydrase TERM 3 2891 - 2873 - g 81 -5.9 -5.01732 | AACGCTCTTAAAAAA CGCCCCT TAATC ATGGGCG TGAGCGCTTTAACGA pyrF 2552 - 3235 + | orotidine 5'-phosphate decarboxylase panC 3235 - 4065 + | pantoate--beta-alanine ligase TERM 4 4888 - 4906 + T 100 -6.8 -5.56263 | opp_overlap 4888 4889, overlap 4889 TTTTGTTTAAAAAAT TCCATTTT TAA AAAATGGG TTTTTGTTTTATCGT TERM 5 4889 - 4905 + T 77 -8.1 -3.91317 | opp_overlap 4888 4889, overlap 4888 TTTGTTTAAAAAATT CCATTTT TAA AAAATGG GTTTTTGTTTTATCG TERM 6 5417 - 5394 - T 100 -7.6 -6.11019 | gap 1, opp_overlap 5397 5398, overlap 5398 AAAAATCAAAAAAAA GAAA-TCCCTT AAA AAGGGAGTTTC ACAAAGGGTTTTAAC TERM 7 5412 - 5398 - T 100 -8.6 -5.36018 | opp_overlap 5397 5398, overlap 5394 ATCAAAAAAAAGAAA TCCCTT AAA AAGGGA GTTTCACAAAGGGTT jhp0007 7443 - 5436 - | putative Outer membrane protein TERM 8 7724 - 7699 - R 85 -10.5 -3.53091 | opp_overlap 7704 7705, overlap 7705 AGCGGTTTTGTCAAA TAAAAACCCCC AAAA GGGGGATTTTA GGGGATTTTAAAAGC TERM 9 7718 - 7705 - R 100 -9.5 -5.27335 | opp_overlap 7704 7705, overlap 7699 TTTGTCAAATAAAAA CCCCC AAAA GGGGG ATTTTAGGGGATTTT TERM 10 7705 - 7718 + r 76 -9.5 -3.07685 | opp_overlap 7705 7699, overlap 7704 TTTGTCAAATAAAAA CCCCC AAAA GGGGG ATTTTAGGGGATTTT groEL 9398 - 7758 - | chaperonin GroEL TERM 11 7813 - 7823 + g 76 -2.4 -5.39905 | CCCATATCAGGCATT GCTG GGG CCGC TTTTTCTTCTTTGAT TERM 12 9258 - 9274 + g 70 -3 -5.08824 | gap 1, overlap 9254 GCCATCTTTAGTGAT GCT-TGG AGCG CCATAGC TTTTTTGGATCAACA groES 9779 - 9423 - | co-chaperonin GroES TERM 13 9455 - 9470 + g 73 -7.6 -4.0044 | opp_overlap 9447, overlap 9440 9447 9437 CATGACAGCAAGCTT CATGCT CTTT AGCATG TTTATGGTCATGATT TERM 14 9610 - 9598 - G 75 -7.7 -4.09685 | opp_overlap 9597 9598 TTGTATTTGCCAAAA GCGAT CAC ATCGC CTTCTTTAACGCATT TERM 15 11209 - 11221 + G 71 -4.9 -4.5528 | overlap 11215 TAAAGAAATGTTAGG GTTTT TGA AAAAC TTTTCCTTGCTTTTA dnaG 10067 - 11746 + | DNA primase jhp0011 11743 - 12795 + | hypothetical protein TERM 16 12991 - 13001 + G 73 -8.2 -3.86063 | opp_overlap 12990 GCGAAGAAAAGGACG CCCC TAA GGGG TTGTTCCCTTTTTAT TERM 17 13653 - 13640 - g 76 -6.7 -4.35581 | opp_overlap 13620, overlap 13619 TGAAAAGATTCAAAA CCTCT TAGA AGAGG ACGCCCTACAAACCA jhp0012 12885 - 13712 + | hypothetical protein jhp0013 13859 - 14140 + | hypothetical protein TERM 18 14300 - 14325 + G 76 -4.7 -5.14965 | TATTGTATTTAGGGT TTTTAGCACTC TTTA GCGTGCTGGAA TTTTTTGATGAAGAT jhp0014 14140 - 14403 + | hypothetical protein TERM 19 15035 - 15023 - g 83 -9.1 -4.08692 | opp_overlap 15023 15023 15021, overlap 15002 GAACTCCCTTTAAAA CCCCT AGT AGGGG GGTATTTGAGCGATA TERM 20 16175 - 16191 + G 74 -3.7 -5.13473 | AACGCTTTGAATGAC GCGTT CAACTCC AACGC TTTTTTAAATGTGAT TERM 21 16246 - 16231 - g 76 -7.6 -4.21194 | opp_overlap 16231 16230 16242 16245 TGCGATCACCCAAAA CCCTAA AGAC TTAGGG CTTTTAGCCTATTAC virB4_1 14405 - 16768 + | DNA transfer protein jhp0016 17008 - 18417 + | hypothetical protein cheV_1 18524 - 19489 + | putative chemotaxis protein TERM 22 19574 - 19551 - g 83 -3.2 -5.61596 | gap 1, overlap 19552 ACGCTTAGAAAAAAA CGCCAAGATTT TAG AAATCGTG-CG CCAGCAAAGCGGGGC nspC 19486 - 20703 + | putative carboxynorspermidine decarboxylase TERM 23 20735 - 20758 + T 81 -4 -5.63103 | overlap 20736 TTTTGATTAAGGTTT TTTGATTAAG GTTT TTTAATCAAG TTTTTTTAATTAAGG jhp0019 21339 - 20764 - | lipid A 1-phosphatase jhp0020 22921 - 21350 - | lipid A phosphoethanolamine transferase TERM 24 23220 - 23244 + r 100 -12.9 -4.00868 | opp_overlap 23218 23217 TTATTAGCCAAAGTT CCCCTAAGCCT AAA AAGCTTAGGGG TTTCCTTGTGGGTGG TERM 25 23526 - 23512 - R 95 -8.6 -5.04249 | opp_overlap 23511 23512 23515 GGTTCAAAAAAGAAA TCCCTT AAA AAGGGA GTTTTAAGCTTTTAG TERM 26 23512 - 23526 + r 72 -8.6 -3.16106 | opp_overlap 23512, overlap 23511 23515 GGTTCAAAAAAGAAA TCCCTT AAA AAGGGA GTTTTAAGCTTTTAG jhp0021 25610 - 23538 - | putative Outer membrane protein gltA 27595 - 26315 - | type II citrate synthase icd 27796 - 29073 + | isocitrate dehydrogenase TERM 27 29594 - 29611 + G 78 -4.1 -5.28176 | gap 1, overlap 29596 AGCTGGATTTTATAC GCCCTGCT ACT AGT-GGGC TTTTTTATCAGTGCA jhp0024 29138 - 29665 + | hypothetical protein bioD 30298 - 29642 - | dethiobiotin synthetase jhp0026 31999 - 30302 - | hypothetical protein jhp0027 32111 - 32524 + | hypothetical protein jhp0028 32526 - 32798 + | hypothetical protein TERM 28 34781 - 34766 - g 73 -5.4 -4.65153 | overlap 34768 TTAGACAAATTAAAA GCCCTA GCAC TAGAGC AAGGCGTGATCTTAA TERM 29 34887 - 34875 - g 100 -4.9 -5.75822 | overlap 34878 GAGAAATTAAAAAAA TCATT CAT AATGA AATCAAAACCCAATT clpA 32798 - 35026 + | ATP-dependent protease,ATP-binding subunit panD 35016 - 35369 + | aspartate alpha-decarboxylase jhp0031 35372 - 35674 + | hypothetical protein jhp0032 35671 - 36678 + | hypothetical protein TERM 30 37299 - 37311 + G 85 -4.1 -5.66229 | AATGCTTCGCTCTTG GGTTT TAC AAGCC TTTTTTGTTGTTAGT TERM 31 37639 - 37627 - g 70 -3.4 -4.86731 | overlap 37611 CGTTTCTAAAGAAAA GGAA ACGCA TTCC CCCACATTCAAGGTA jhp0033 36686 - 37741 + | hypothetical protein comB1 37867 - 38610 + | DNA transformation competancy TERM 32 38628 - 38639 + G 76 -3.6 -5.30199 | overlap 38612 CGTAAGGTTTTATAC GCTC TCAT GGGC TTTTTGTTGGTTTTT comB2 38610 - 39596 + | DNA transformation compentancy comB3 39589 - 40719 + | DNA transformation compentancy TERM 33 41241 - 41224 - g 74 -4.9 -4.68994 | gap 1, opp_overlap 41224 ATTAGCATTGAAAAA CCCAACAC GGA GT-TTGGG TATATTGAAAGCCCT manC 40789 - 42201 + | phosphomannose isomerase/GDP-mannose pyrophosphorylase gmd 42242 - 43387 + | GDP-D-mannose dehydratase jhp0039 43380 - 44312 + | putative sugar nucleotide biosynthesis hypE 46188 - 45190 - | hydrogenase expression/formation protein jhp0041 48464 - 46191 - | putative transcriptional regulator TERM 34 46537 - 46549 + g 73 -7.7 -3.87994 | opp_overlap 46537 TCAAAAGGGTAAAAA GCGAT CTC ATCGC TTTGTAGGGCTAGAT TERM 35 46549 - 46537 - G 84 -7.7 -4.7416 | opp_overlap 46537 TCAAAAGGGTAAAAA GCGAT CTC ATCGC TTTGTAGGGCTAGAT TERM 36 47144 - 47128 - G 86 -4.5 -5.4505 | opp_overlap 47128 GTTTTTAAGAAAAAA TTCAAAG TTT CTTTAAA GTGTTTTTCATTTTC TERM 37 48405 - 48394 - G 86 -7.2 -5.06016 | overlap 48395 AGGATATAAACAAAA GGGC GCAT GCCC ACGCCTTGAACCACG jhp0042 49432 - 48440 - | hypothetical protein jhp0043 50183 - 49491 - | putative type II DNA modification enzyme (methyltransferase) jhp0044 50718 - 50161 - | putative type II DNA modification enzyme (methyltransferase) TERM 38 51108 - 51118 + r 71 -5.4 -4.65078 | opp_overlap 51108 51103 AAGCGTAAAAGAAAA CTTG TAT CAAG TTTTATTGGAGCTAT TERM 39 51118 - 51108 - R 76 -5.4 -5.10163 | opp_overlap 51108, overlap 51103 AAGCGTAAAAGAAAA CTTG TAT CAAG TTTTATTGGAGCTAT jhp0045 52183 - 51152 - | putative type II DNA modification enzyme (methyltransferase) jhp0046 52975 - 52193 - | putative type II restriction enzyme putP 54893 - 53403 - | sodium/proline symporter TERM 40 53620 - 53607 - G 70 -9.5 -2.50113 | opp_overlap 53607, overlap 53606 GAGCATGCCAGCAAT CGCGC CAAT GCGCG TCATTCTTGACCAAA TERM 41 53607 - 53620 + g 72 -9.5 -2.93073 | opp_overlap 53606 53607 GAGCATGCCAGCAAT CGCGC CAAT GCGCG TCATTCTTGACCAAA putA 58477 - 54920 - | proline/pyrroline-5-carboxylate dehydrogenase TERM 42 55525 - 55547 + g 90 -8.4 -5.03747 | opp_overlap 55523 CTTTTTGAGTCAAGC CCTCTAAAGC TTC GCTTAAGGGG TTTTTTAAGGCGTTT TERM 43 56263 - 56295 + g 78 -7.1 -4.38154 | overlap 56264 TACCGCCTGTTTCAG CGCTTAAGGCTAA AGTGGGG TTAGCCTTGAGCA TTTTATAAGCGGTGT TERM 44 56264 - 56294 + g 79 -10.6 -3.2241 | overlap 56263 ACCGCCTGTTTCAGC GCTTAAGGCTAA AGTGGGG TTAGCCTTGAGC ATTTTATAAGCGGTG jhp0049 58798 - 59007 + | hypothetical protein jhp0050 59335 - 59997 + | hypothetical protein jhp0051 60127 - 60489 + | hypothetical protein TERM 45 61069 - 61015 - g 70 -8.4 -3.28041 | opp_overlap 61019, overlap 61019 AAGCTCAACCACCAA GTTACCGCGCTCACTAATGAGCGAGA TAG TCTCGAACAAGAGCGAGCGCGATTGC AAGATGCGCATGGGT TERM 46 61065 - 61019 - g 81 -12.2 -2.58767 | opp_overlap 61019, overlap 61015 TCAACCACCAAGTTA CCGCGCTCACTAATGAGCGAGA TAG TCTCGAACAAGAGCGAGCGCGA TTGCAAGATGCGCAT jhp0052 60490 - 61473 + | hypothetical protein TERM 47 61833 - 61823 - g 74 -4 -5.15117 | GAAAAGCTTAAAAAA TTGA TGC TCAA TGTGGATAGTGTAGC jhp0053 61484 - 61915 + | hypothetical protein TERM 48 62465 - 62479 + G 70 -3.6 -4.91109 | AACATGGAAAATGGC GTGTTT TTG AAATAC TTTTTATCCTACCCC TERM 49 63197 - 63217 + G 77 -9.7 -3.61219 | opp_overlap 63195 63197 63200 63202, overlap 63200 TTAAAAGGCAAGATA GAAGATGGC GTT GCCAACTTC TTTGCCGGATTTTCT TERM 50 63217 - 63197 - g 73 -9.7 -3.18404 | opp_overlap 63197 63200, overlap 63195 63200 63202 TTAAAAGGCAAGATA GAAGATGGC GTT GCCAACTTC TTTGCCGGATTTTCT jhp0054 62096 - 63664 + | hypothetical protein jhp0055 63665 - 63901 + | hypothetical protein TERM 51 64289 - 64261 - g 81 -7.5 -4.57341 | overlap 64272 AATGGCGTTCAAAAA TTGCTCACCAA CGCTGAT TTGGGGAGCAA CCACAAACCAATCGT TERM 52 64386 - 64361 - g 79 -6.8 -4.55004 | AATACAAAAGAGAAA GAGGCGAAAC GCTAGA GGTTCGCCCC ACAACACCCCCTAGC TERM 53 64411 - 64391 - g 75 -9.7 -3.28791 | AGGTTCGCCCCACAA CACCCCC TAGCTAT GGGGGTG GGAGCATTAGAATCA jhp0056 63898 - 64467 + | hypothetical protein jhp0057 64483 - 64743 + | hypothetical protein TERM 54 65049 - 65036 - gf 71 -8.1 -3.21276 | opp_overlap 65034 65037 65039, overlap 65034 65037 CCTCCTGCTAGAATA GCTGC TACG GCAGC CATTGTAGCCGCTGA TERM 55 65844 - 65820 - gf 76 -4.4 -5.09225 | gap 1, overlap 65824 ATTTGAGTCAAAAAA TCGATCCCGTT TTAG AACGGAAT-GA AAATTATACGCAAAA jhp0058 64754 - 66256 + | hypothetical protein TERM 56 66543 - 66564 + GF 71 -5.1 -4.56775 | opp_overlap 66545 66548, overlap 66545 66546 66548 GTATTATCTTTGGAA TACCACCAC TGAT GTGGTGCTG TTTTTAGACACCGAT TERM 57 66546 - 66561 + GF 73 -9 -2.93708 | opp_overlap 66545 66548, overlap 66545 66543 66548 TTATCTTTGGAATAC CACCAC TGAT GTGGTG CTGTTTTTAGACACC jhp0059 66226 - 66645 + | hypothetical protein jhp0060 66647 - 67000 + | hypothetical protein TERM 58 67179 - 67164 - g 72 -9 -3.37612 | opp_overlap 67164 67163 67166 CCGAAGTTCAATGAA GAGGGT GCTT ACCCTC AATTTTTAAGCTGTG TERM 59 68285 - 68272 - g 73 -2.3 -5.22943 | ATGAAATGCAAAAAA GAGCC GATC GGTTC AAGCAGTTTAATGTG TERM 60 68763 - 68726 - g 71 -4.9 -4.57304 | opp_overlap 68757, overlap 68753 68757 ATTTAACCAAAGAAA TCTCGCACCCATAGATC GTAA AATCTATAATGGCGAGA CACCTTTAAAAATGC jhp0061 66993 - 69413 + | hypothetical protein ureH 70284 - 69487 - | urease accessory protein ureG 70883 - 70284 - | urease accessory protein TERM 61 70641 - 70662 + g 70 -8.8 -3.34902 | opp_overlap 70652, overlap 70657 ATGCATTTCTTCTAC CGCTTCTA AATTCA TAGAAGCG TCTTCTCTAATAGCC TERM 62 70837 - 70849 + g 70 -9.1 -3.14132 | opp_overlap 70836 70837 AAAGCTTCAATCAAG GCGGT TTT ACCGC TTCCTACAGGACCAC ureF 71682 - 70912 - | urease accessory protein TERM 63 71453 - 71474 + g 81 -6.7 -4.70887 | gap 1, overlap 71439 TGGCTAGAGAGATTG GC-CTTTAGA TAC TCTAAAGCGC TTTCTTTGTTGGTAA ureE 72218 - 71706 - | urease accessory protein UreE TERM 64 71909 - 71919 + g 75 -8.2 -4.02719 | opp_overlap 71908 CGCCATAGTATAGAG CCGC ATG GCGG TTTCCTATTTCGTAA ureI 72807 - 72220 - | urea transporter TERM 65 72965 - 72923 - R 95 -5.1 -6.17669 | gap 1 AATAAAACAAAAAAA TAAGC-CCCCAACTTTTAAT AAAT AATAAAAGTCAGAGAGCTTA AAGACTAAGATTTAA TERM 66 72998 - 72976 - R 77 -9.3 -3.29837 | overlap 72974 GCTTAAAGACTAAGA TTTAAGGAG GAACG CTCCTTAAA ATCCTAAAAAATTAA TERM 67 73036 - 73017 - R 72 -3.6 -5.25735 | overlap 73019 CTAAAAAATTAAAAA TCCTAGAA AAAA TCCTAGAA AATGCTAAAGAGTTG ureC 74740 - 73031 - | urease subunit alpha ureA 75460 - 74744 - | bifunctional urease subunit gamma/beta lspA 76305 - 75814 - | lipoprotein signal peptidase TERM 68 76123 - 76101 - G 75 -5.6 -4.67038 | GCCCTAAAATTAAAA GGATTTGCAA GTA TTTCAAACCC CCCTCTAAAAAACTG TERM 69 76294 - 76263 - G 83 -3.6 -5.69379 | opp_overlap 76263 76265, overlap 76265 AGATAAGGAAAAAAA CCCCCATGAAAACC AATA GGCTTTTTTGGGTG GTGTTTAGCACAACT glmM 77636 - 76299 - | phosphoglucosamine mutase TERM 70 77581 - 77597 + g 83 -12.3 -2.91695 | opp_overlap 77580 77577 77579, overlap 77578 CGCATCACAAACATG GGGGTGA GTT TCACCCC TGCTTTACCCCTCAC rpsT 77726 - 77995 + | 30S ribosomal protein S20 TERM 71 78226 - 78213 - g 73 -2.4 -5.22312 | AGCGACATTAAAAAA CTCA CCGAAT TGAG CAAAGAGCAAAGCTC prfA 78114 - 79172 + | peptide chain release factor 1 TERM 72 79566 - 79550 - f 100 -9.5 -5.83226 | AATGCAATAAAAAAA GAAATCC TTA GGATTTC TCACATTAAGGAGTT TERM 73 80173 - 80193 + G 79 -8.3 -4.0896 | overlap 80171 GAACACGAGCTACTT CCAAATGCC TGT GGAATTTGG TTTTAGGAGCAATTT jhp0073 79586 - 80353 + | putative Outer membrane protein TERM 74 80369 - 80394 + F 100 -10.5 -5.29208 | opp_overlap 80375 GCCTTTCTCTTCTTT CCAATAGAGGG TTTT CTCTCTGTTGG TTTCTTTTTTCTTTT TERM 75 80955 - 80967 + G 75 -7.7 -4.06491 | GATTCTTTTTATAGT TACCG CAC CGGTA TTTATATCCCCTTAG TERM 76 81087 - 81077 - g 79 -6.8 -4.51777 | opp_overlap 81077 81076 ACAGGAGAATGAAAA GGCT CAA AGCC CTTATTACAGGAGCA TERM 77 81218 - 81242 + G 83 -7.1 -4.77036 | TGACTTTTATGATGG CATGTATGGGT TCT ACCCTAACATG TTTTTCATGATGCAA jhp0074 80604 - 82376 + | hypothetical protein TERM 78 82761 - 82738 - T 72 -7.4 -3.95073 | overlap 82759 CTTTACAGCTAGAAA GCCCCTTGCT TTAG AAAAAGGGGC GATTCCACCTTTCAG jhp0075 84821 - 82800 - | methyl-accepting chemotaxis protein (MCP) TERM 79 84932 - 84917 - R 95 -9 -5.22137 | overlap 84927 AAGCAGAAAATAAAA GAGAGC CAAA GCTCTC CAAAGCTCCCCCAAA rpsI 85360 - 84971 - | 30S ribosomal protein S9 rplM 85782 - 85357 - | 50S ribosomal protein L13 jhp0078 86322 - 86134 - | hypothetical protein jhp0079 87681 - 86329 - | hypothetical protein TERM 80 86963 - 86941 - G 78 -4 -5.18371 | overlap 86945 CGGCACAAAATAAAA GCTACCCGCC ACA GGCAAGCACC CTAAATCCAGGCCAT jhp0080 89108 - 87735 - | hypothetical protein rpoD 91173 - 89128 - | RNA polymerase sigma factor RpoD TERM 81 89157 - 89171 + g 74 -9.2 -3.5944 | AGTTTCTCAAAATGC GCCCGT ATT GCGGGC TTCTCAATTTTTTGA TERM 82 89293 - 89304 + g 85 -7.2 -4.89339 | opp_overlap 89292 AAGCCCAAAACGCAT GCGG ATCA CCGC TTTTTCTCGCTCGTT TERM 83 89774 - 89750 - G 72 -10.1 -2.64973 | overlap 89740 ATCAAGCCGATATTA CCCTCTTGAAT CAA ATCCAAGAAGG GTAAGCCTCTGCTCG TERM 84 89938 - 89955 + g 74 -4.2 -5.05782 | GCCTTCTTCGCTCGC CTCTTT AGTCAA AAAGAG TTTTTTGAGATCCAT TERM 85 90361 - 90378 + g 78 -2.7 -5.46129 | overlap 90370 TTCAACGCGCTTCTT GTCTTTT TCGG AAACGAC TTTTTTCCTTTCTTC TERM 86 91133 - 91146 + g 73 -2.3 -5.1963 | TTGGCTTCCTGTTTA GCTCT TTTG GGGGC TTTTTCTTCGTTAGC jhp0082 92088 - 91396 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 87 91765 - 91734 - G 70 -2.9 -5.06414 | TCGTTTCAATAAAAA TCGCGCTTTCGGG GATAAA CCCTAAAGGGTGA TCAAACGCGCTCAAA fabD 93031 - 92102 - | acyl-carrier-protein S-malonyltransferase TERM 88 93394 - 93361 - H 100 -9.7 -4.84918 | TTTACAAATACAAAA TTTAGGTTGGGTG AAGAGAGA CACCCAGCCTAAA CCCTATAAGGGTTGT jhp0085 94286 - 95119 + | type II DNA modification (methyltransferase jhp0086 96039 - 95139 - | putative alpha(1,2)fucosyltransferase TERM 89 96129 - 96143 + r 90 -5.8 -5.63517 | AAGCGGAATAACGCC TTCAAA TCA TTTGAA TTTTTTATTTGAAAA jhp0087 96665 - 96135 - | hypothetical protein jhp0088 96738 - 97682 + | 2-hydroxyacid dehydrogenase TERM 90 97787 - 97759 - T 83 -4.6 -5.58179 | CATTATAAGAAAAAA GCCTTTAAGG TGGATTGAC CCCCAAAGGC TTTTATTAAAGGGGG jhp0089 98519 - 97806 - | hypothetical protein thrC 100083 - 98623 - | threonine synthase jhp0091 100277 - 102304 + | methyl-accepting chemotaxis protein (MCP) TERM 91 103256 - 103240 - g 70 -5.9 -4.33151 | opp_overlap 103249, overlap 103249 TACGATAATTTAAAA GAGTTAA ACC TTAACCC CTTAAGTTATGAAGA jhp0092 102304 - 103410 + | hypothetical protein TERM 92 104118 - 104105 - g 80 -2.4 -5.60993 | TTGTGGATAAAAAAA CCTA TCGCTT TAGG AGTTATTTAGGAATC jhp0093 103627 - 104388 + | hypothetical protein jhp0094 105153 - 104371 - | hypothetical protein TERM 93 104470 - 104457 - G 79 -5.3 -5.13521 | opp_overlap 104469 AAAGCATGGAAAAAA CATTC GCTT GAATG CCGTTTTCTTGGCAT jhp0095 106879 - 105185 - | methyl-accepting chemotaxis protein (MCP) TERM 94 106705 - 106718 + g 74 -3.8 -5.0916 | opp_overlap 106705 TCGTCATGTAAGCGA GCGT TTTTTC ACGC TTTTTGTATTGCCCG cpdB 108840 - 107095 - | 2',3'-cyclic-nucleotide 2'-phosphodiesterase TERM 95 107744 - 107760 + g 70 -7.9 -3.64184 | opp_overlap 107705 107757, overlap 107746 AAATTGAACAAGGCT GCCGCTG AAA CATCGGC TTTGGCGTAATATTT jhp0097 109439 - 108981 - | S-ribosylhomocysteinase metB 110619 - 109477 - | cystathionine gamma-synthase/cystathionine beta-lyase TERM 96 110222 - 110233 + g 79 -5.8 -4.99134 | AGGGCTTTGGTGTTG GGCT TGAT AGCC TTTTTAATTTGGGAT cysK 111561 - 110644 - | cysteine synthase TERM 97 110887 - 110873 - G 78 -2.8 -5.41746 | AAGTTTGCAAAAAAA GGAG GGATGAA CTCC ACGCCAATGCCCTCA TERM 98 111384 - 111396 + g 80 -7.7 -4.32067 | TGGAAGTGATTTTGC GCGTT CTA AACGC TTCTTTTATGAGGTA jhp0100 111680 - 112138 + | hypothetical protein TERM 99 112291 - 112304 + T 74 -6.7 -4.26903 | opp_overlap 112286 112291 112301 ATACCAAAAAGGAAC TCCCT CATA AGGGA TTTTCCTAAAATCCC TERM 100 112319 - 112301 - T 83 -10.4 -3.30159 | opp_overlap 112291, overlap 112291 112286 GGAACTCCCTCATAA GGGATTTT CCT AAAATCCC ACCAACGCTTTTTAA TERM 101 112396 - 112406 + T 71 -3.2 -5.2696 | overlap 112387 TTTGGATTAAAAAAA CGCT TTG AGTG TTTTTTAGATTTTGC TERM 102 112481 - 112453 - T 100 -11.8 -4.68539 | opp_overlap 112457 112477 ATGAAAATGAGAAAA GCAAGCGGGTTT TGATT AAAACCGCTTGC TTGAAAGAAGTTTTT dnaK 114374 - 112512 - | molecular chaperone DnaK TERM 103 113569 - 113579 + g 72 -3.2 -5.15117 | TCAGTCTCCATCGCA GAGC TCA GTTC TTTTTTAGCGTTTTC TERM 104 114334 - 114323 - G 71 -7.2 -3.86015 | opp_overlap 114322 CATTGCCTTCATAAA CCGC CATT GCGG AGTTGGTTGTCCCTA grpE 114979 - 114404 - | 24kDa chaperone jhp0103 115779 - 114979 - | heat-inducible transcription repressor TERM 105 115427 - 115437 + g 79 -3.2 -5.40474 | ACTCTTTCCAAACGC TCCA AGC TGGG TTTTTTTAACAGCGT TERM 106 115476 - 115488 + g 86 -7.7 -4.87893 | opp_overlap 115449 CAAAGTTTTCACTCG CGCTT TTT AAGCG TTTTTCATTCACCTT jhp0104 116018 - 116656 + | hypothetical protein jhp0105 116694 - 116990 + | hypothetical protein jhp0106 118883 - 117000 - | hypothetical protein TERM 107 118913 - 118902 - R 86 -7.2 -4.91712 | opp_overlap 118912 TTTAACTTATAAAAA GGGC TAAC GCCC CCTTAAATTAAGGGC flaB 120475 - 118931 - | flagellin B TERM 108 122124 - 122139 + G 73 -6.8 -4.15565 | opp_overlap 122122 122124 AAAAAAAGCAAATCA GCGCTT TAGA GAGCGC TTTTAAAGTGATAGA topA_1 120641 - 122851 + | DNA topoisomerase I TERM 109 122958 - 122937 - g 74 -4.5 -5.00616 | opp_overlap 122940, overlap 122940 TCGCCCTCTAAAAAA CAATGCAAT TACA ATTGCATTT ATTGCGAGTTGGGTA TERM 110 122940 - 122955 + G 71 -6.2 -4.183 | opp_overlap 122937 122940 CCCTCTAAAAAACAA TGCAAT TACA ATTGCA TTTATTGCGAGTTGG TERM 111 122955 - 122940 - g 77 -6.2 -4.61482 | opp_overlap 122940, overlap 122937 CCCTCTAAAAAACAA TGCAAT TACA ATTGCA TTTATTGCGAGTTGG TERM 112 123228 - 123242 + G 70 -3.6 -4.87133 | CAGGCCTTAAAGGAA TTTGAC ATC GTTAAA TTTTCTTTAGACGCT jhp0109 122844 - 123770 + | hypothetical protein jhp0110 125153 - 123915 - | hypothetical protein ppsA 127690 - 125252 - | phosphoenolpyruvate synthase TERM 113 125836 - 125855 + g 74 -5 -4.78572 | gap 1 AATACCGACTAGCCC CCCTATAGC CAA GC-ATGGGG TTTTCTTCATTAGGC TERM 114 125984 - 126004 + g 73 -8.5 -3.66654 | GCCAATGCCTTCAGC GATTTTTTT CAC AAAAAAATC TTTAGGGTTAGCATA TERM 115 126028 - 126044 + g 86 -2.3 -5.95539 | TAGCATAGCCTGCCA TGAGGTT TTC AATTTCA TTTTTTTCTTTCACG TERM 116 126630 - 126641 + g 70 -3 -5.03961 | TTGAATTTGAATTTT TCAA AGAC TTGA TTTTCTTCTTTGGTT jhp0112 127876 - 128007 + | hypothetical protein TERM 117 129562 - 129572 + G 81 -6.8 -4.67607 | AGCGAACATTTTGGG GGGA ATT TCCC TTTCTTTGTTGCGCC thrS 128047 - 129885 + | threonyl-tRNA synthetase infC 129882 - 130493 + | translation initiation factor IF-3 rpmI 130474 - 130668 + | 50S ribosomal protein L35 rplT 130763 - 131113 + | 50S ribosomal protein L20 TERM 118 131163 - 131192 + F 73 -8.9 -2.97768 | gap 1, opp_overlap 131163, overlap 131162 131170 AAAAAGGTGAGAGGA TTTAGG-ACTTTTT ACT AAAAAGTTCCTAAA ATTGATTTTTGTTTC TERM 119 131192 - 131163 - f 72 -8.9 -2.66882 | gap 1, opp_overlap 131163 131162 131170 AAAAAGGTGAGAGGA TTTAGG-ACTTTTT ACT AAAAAGTTCCTAAA ATTGATTTTTGTTTC TERM 120 131409 - 131393 - g 74 -5.1 -4.78572 | CCCTAAGCAAGAAAA GGCTATT AAG ACTAGCC CTACCAAAAAAGGTG jhp0117 131313 - 132173 + | putative Outer membrane protein TERM 121 132395 - 132383 - f 73 -7.7 -3.68647 | opp_overlap 132383 TAAAACAATGAAAGA GCTTG CGT CAAGC AACCTATATTCTCTT jhp0118 132653 - 133084 + | hypothetical protein TERM 122 133126 - 133165 + F 87 -8.6 -4.22338 | gap 1, opp_overlap 133126 ATTTTTGTAAAACCA CGCTGTAAGCCCC-TAGCT TTT GGCTGTGGGGATTAGAGCG TTTTCGCGTTATAAT jhp0119 133496 - 134353 + | hypothetical protein sdaB 136352 - 134985 - | L-serine/L-threoninedeaminase TERM 123 135347 - 135360 + g 100 -6.7 -5.93809 | ACCCGGCTTCTGCGC CGCTT AAGG AAGCG TTTTTTTTGTAAAGA sdaC 137593 - 136352 - | L-serine transporter TERM 124 138816 - 138800 - g 75 -2.9 -5.27335 | overlap 138801 138802 GTGTTGAAAGAAAAA CGCCACA TTT TATGGAG CATTGATCCCATGCA aroF 137774 - 139123 + | phospho-2-dehydro-3-deoxyheptonate aldolase jhp0123 139412 - 139546 + | hypothetical protein TERM 125 139577 - 139559 - T 71 -3.2 -5.30575 | overlap 139561 TAAAAATTTAAAAAA GTTAAAAA GCG TTTTTTAC CATCAAATTAAAAGG TERM 126 139633 - 139659 + T 100 -7.4 -5.35222 | overlap 139635 TAAAAAGCGTTTTTG TGGGGTTATTGT CGC AAAATAACCCTA TTTTTTATGAGTTTT TERM 127 139635 - 139657 + T 80 -7.8 -4.28383 | overlap 139633 AAAAGCGTTTTTGTG GGGTTATTGT CGC AAAATAACCC TATTTTTTATGAGTT bcp 140229 - 139771 - | bacterioferritin comigratory protein TERM 128 140099 - 140133 + g 85 -5.8 -5.24129 | overlap 140093 140101 TCTAAGGTGCATCCG GGGGTGTTGTCTTT AGGGTAG AAATACAACACCAC TTTTTTATGGAGCAA jhp0125 140874 - 140239 - | hypothetical protein jhp0126 142312 - 140867 - | putative iron-sulfur protein jhp0127 143069 - 142341 - | hypothetical protein TERM 129 142382 - 142402 + g 74 -4 -5.08824 | AGTCATAAAAATGCA TGGGTTTT GTCAA AGAGCCCA TTTTTTGCATAGCGG TERM 130 143335 - 143368 + G 93 -6.6 -5.46276 | AGGCCATATTTGGCT GAGCGCTTTAGTCG CACTTT CGCCTATTGCGCTC TTTTTTATCTCTCTT TERM 131 143526 - 143549 + G 78 -3.8 -5.27335 | overlap 143518 ATGGCTTGTGGCCGA TCGCATGGAT TGTG ATCGCTGCGA TTTTTCTTTACAACC TERM 132 143871 - 143888 + G 91 -6.3 -5.47159 | overlap 143877 AGATTTCTCAAATGG TGGGTAG GGTG TTACCCA TTTTTTCTATTGGCA lldP_1 143291 - 144940 + | L-lactate permease TERM 133 145664 - 145680 + G 75 -2.9 -5.30616 | AAAGAGACTTTTCCG GCCGT TTTTATC GCGGC TTTTTCTTTCGCTGG lldP_2 144989 - 146644 + | L-lactate permease mutY 147654 - 146668 - | A/G-specific adenine glycosylase TERM 134 146912 - 146927 + g 78 -4 -5.24129 | opp_overlap 146912 TGGTGCATCCCCAAA TAGAGT TTTT GCTCTA TTTTTTCTAAAGCGA jhp0131 149103 - 147655 - | hypothetical protein TERM 135 147923 - 147909 - G 71 -4.2 -4.8543 | overlap 147920 CAATCCCCACAAAAA GCGC GAATAAT GCGC TCACATGAGCGGTGA TERM 136 149017 - 149003 - G 75 -2.8 -5.30339 | ATGAAAATACAAAAA TAAAGC CAT GCGTTA GGGTTTAGCCCATCC TERM 137 149330 - 149340 + G 73 -6.8 -4.15565 | AAATTGTTTCTTTAT GCGA TGA TCGC TTTTGGGATAATAGG fixN 149273 - 150739 + | cytochrome oxidase (CBB3-type) fixO 150752 - 151450 + | cytochrome oxidase (CBB3-type) fixQ 151461 - 151679 + | putative cytochrome oxidase (CBB3-type) fixP 151681 - 152559 + | cytochrome oxidase (CBB3-type) jhp0136 152570 - 152776 + | hypothetical protein TERM 138 153198 - 153178 - g 81 -5.5 -5.03715 | ATGACGCTCAAAAAA TAGAATTAG TGG CTAACCCTA AAGATTTGCTAGACA jhp0137 152877 - 153470 + | hypothetical protein jhp0138 153483 - 154064 + | hypothetical protein TERM 139 154116 - 154089 - f 74 -9.4 -2.55668 | overlap 154088 154105 TATGGGTATATCAAT TTTAAAAAACGC TAAA GCATTTTTTAAA TACAAAATATAAAAG TERM 140 154270 - 154257 - f 71 -6.7 -3.9712 | opp_overlap 154257 154256 TGAGCTTATGATAAA GGGAT CAAA ATCCC ATTTTTAAAAATTAA TERM 141 155371 - 155387 + G 86 -8.1 -4.84311 | overlap 155379 TCTTTTATGGGGGGT GGATTTT TTA AAAATCC TTTTATTGTATGGGG jhp0139 154676 - 155443 + | hypothetical protein jhp0140 156303 - 155440 - | hypothetical protein TERM 142 155687 - 155700 + g 70 -8.1 -3.73072 | opp_overlap 155687, overlap 155676 155699 TCCTGGTGTTTTAAA GCGGT TTCA ACCGC TTTAATCAAAGCCTT TERM 143 157355 - 157319 - g 74 -6 -4.4017 | GCAAGGCCGAGAAAA CGCTAAAGCCTTAT TGAAAGAAG ATAAAGCCCTAGCG GATGAAATCACTCTT recA 156402 - 157445 + | recombinase A TERM 144 158044 - 158030 - g 70 -2.9 -5.04385 | CACACGCTTAAAAAA CTTTT AGATG AAAAG AATCAGCTCACAAGC TERM 145 158456 - 158446 - g 89 -5.4 -5.47821 | overlap 158455 AGGCATTGAAAAAAA CGTT GCA AACG CCATTTTGATCAAAC eno 157457 - 158737 + | phosphopyruvate hydratase TERM 146 158955 - 158968 + G 79 -6.7 -4.50159 | opp_overlap 158944, overlap 158961 CAAAGCAAGAATGTG CGCTT GCAA AAGCG TTTGTTTGAGTTGAG jhp0143 158730 - 159005 + | hypothetical protein jhp0144 159022 - 159618 + | hypothetical protein aroK 159623 - 160111 + | shikimate kinase jhp0146 160133 - 161089 + | hypothetical protein jhp0147 162219 - 161086 - | putative lipopolysaccharide biosynthesis protein TERM 147 162233 - 162243 + H 76 -5.4 -5.10497 | ATTTTAAGTGGTTTC CCTA AAA TAGG TTTTTTAAATCAATT TERM 148 162660 - 162673 + G 70 -8.1 -3.66139 | opp_overlap 162659 162656, overlap 162671 AATTTGAGGAATCAT CTCGC TTGC GCGAG TTTAGGCTCTATGTA jhp0148 162372 - 163289 + | hypothetical protein TERM 149 163894 - 163920 + T 79 -8.7 -3.86311 | opp_overlap 163895, overlap 163895 CATCAGCCTGAAAAA AGCCTAAACGC CTTTA GCGTTTGGGCG TTTCACTTTCACTAT TERM 150 163895 - 163919 + T 90 -12.2 -2.91063 | opp_overlap 163895, overlap 163894 ATCAGCCTGAAAAAA GCCTAAACGC CTTTA GCGTTTGGGC GTTTCACTTTCACTA TERM 151 163919 - 163895 - T 100 -10.7 -5.03715 | opp_overlap 163894 163895 ATCAGCCTGAAAAAA GCCTAAACGCC TTT AGCGTTTGGGC GTTTCACTTTCACTA jhp0149 164692 - 163970 - | hypothetical protein hemB 165664 - 164693 - | delta-aminolevulinic acid dehydratase jhp0151 167014 - 165686 - | putative histidine kinase sensor protein jhp0152 167717 - 167040 - | putative transcriptional regulator TERM 152 167913 - 167923 + r 76 -5.4 -5.0538 | opp_overlap 167913 167906 167905 TTGAAAACTAAAAAG CACT TTG AGTG TTTTTTACCATCAAA jhp0153 168598 - 168125 - | hypothetical protein TERM 153 168395 - 168413 + g 74 -3.8 -5.1287 | TGTGATTTTCTCTTG CGTTTCTA TTT TAGCAGCG TTTTTTGGCTCTAAA TERM 154 168526 - 168537 + g 73 -2.2 -5.22943 | opp_overlap 168516, overlap 168516 TAAAACCATCATCAA TGGT TTTA GCCA TTTTTTCAATTTCAT jhp0154 168840 - 168577 - | hypothetical protein TERM 155 168729 - 168746 + g 77 -4.8 -4.89521 | TCATTTGCTTTAACG CCTCTG TATTGT CAGGGG TTTTCTTTAAAATAT jhp0155 170155 - 168887 - | putative protease jhp0156 170889 - 170158 - | hypothetical protein prfB 172050 - 170959 - | peptide chain release factor 2 moeA 173283 - 172111 - | molybdopterin biosynthesis protein fliR 174060 - 173293 - | flagellar biosynthesis protein FliR TERM 156 173684 - 173694 + g 79 -6.8 -4.63527 | AATAAAAGGGCTTGC CCCA CAA TGGG TTTTTGCGATCCTGA jhp0160 174782 - 174054 - | hypothetical protein TERM 157 174954 - 174940 - H 80 -7.8 -4.18443 | TATAAAGAATAATAA CCCTGG TAA CCAAGG GAAGAGAATACATAC TERM 158 175001 - 174975 - H 91 -10.4 -3.9679 | opp_overlap 174978, overlap 174978 GAATACATACAACAA CAATTACGAATA TTA TATTCATAATTG CATCGAGAATTTTTG TERM 159 175151 - 175161 + H 71 -5.4 -4.58424 | AAGCATTTCTTACCC CTCA ATA TGAG TTTTCTATAGTCATG TERM 160 175283 - 175301 + G 72 -4.4 -4.7497 | overlap 175284 AAATTTAGCGTTAGT GGGCGCGT TGA GCGCGTCG TTTTTGATGGCTAAG TERM 161 175380 - 175360 - g 71 -5.3 -4.57787 | opp_overlap 175360 ATAACACGAAAGAAA CGACTGATG CTT CAGCAGGCG TGTTAGCGACAGTGG jhp0161 175251 - 176150 + | putative peptidyl-prolyl cis-trans isomerase fba 176164 - 177087 + | fructose-bisphosphate aldolase TERM 162 177486 - 177500 + G 70 -7.8 -3.62591 | GATTTCAGTGGATGT GCCGCA AGT TGTGGC TTTAAAGATTGTGGA efp 177109 - 177672 + | elongation factor P TERM 163 177808 - 177830 + F 76 -9.4 -3.0264 | opp_overlap 177801 AAAATGGATTGACTT TTTTTATTGA GTG TCAATAAAAA TATTCAAAAGCATTT jhp0164 178219 - 179565 + | putative restriction enzyme TERM 164 179878 - 179862 - g 78 -3.8 -5.19275 | ATTCAGAAAATAAAA GTTATT ATGAA AATAAC GCAAAAGGCAGGATA jhp0165 179558 - 180778 + | hypothetical protein neuB 181872 - 180850 - | sialic acid synthase TERM 165 180914 - 180926 + g 71 -4.9 -4.56969 | opp_overlap 180904 AAAAATTTTGATGCC TTTTG GCC CAAAA TTTCTTTATAAAATT jhp0167 182516 - 181875 - | ABC transporter ATP-binding protein TERM 166 182292 - 182310 + g 74 -9 -3.55761 | TTTTAAGCGCCGCAA TTCCAAAA GCT TTTTGGAA TTTAGGGCATAAATA lnt 183790 - 182513 - | apolipoprotein N-acyltransferase TERM 167 182910 - 182922 + g 79 -3.3 -5.41143 | opp_overlap 182899 AAGATCACTTTATCA GCGAT TTG AACGC TTTTTTTAGAAAATA TERM 168 183092 - 183106 + g 71 -6.4 -4.27211 | AATCAAGGTTTTTTG CTTGCT TTG AGCGAG TTTGATTTCTTTAAG TERM 169 184219 - 184231 + G 87 -6.3 -5.2112 | GAAATGAAACCATGA CCAAT CTC ATTGG TTTTTTACTGGTGTT TERM 170 184249 - 184262 + G 84 -2.3 -5.85178 | TTTTACTGGTGTTGG CGTCC ATTT GGGTG TTTTTTTTAGCTCTT TERM 171 184654 - 184640 - g 74 -4.2 -5.08255 | AGCTTTAAAAGAAAA GGCTAA AGA TTTGCC TAAAAACATGCTAGA jhp0169 184026 - 184736 + | hypothetical protein TERM 172 185992 - 185974 - g 78 -7.5 -4.46112 | opp_overlap 185973 TTGCAGGTAAAGAAA TCGCTAA TGGCT TTAGCGA GTTGAATGACCCTTT lysS 184746 - 186251 + | lysyl-tRNA synthetase TERM 173 187289 - 187276 - g 76 -4.5 -5.07486 | CACCGTGAATAAAAA CACCA TTCC TGGCG AAACGCGCAACCCTT glyA 186251 - 187501 + | serine hydroxymethyltransferase jhp0172 187511 - 188053 + | hypothetical protein jhp0173 188075 - 188881 + | hypothetical protein jhp0174 190976 - 189273 - | hypothetical protein jhp0175 191132 - 191665 + | hypothetical protein jhp0176 193180 - 191672 - | putative cardiolipin synthase TERM 174 192934 - 192945 + g 76 -4.4 -5.12617 | TATAGATATAAGTTT GCAT GTCA ATGC TTTTTTGGCTCATTC sdhB 193939 - 193202 - | fumarate reductase iron-sulfur subunit frdA 196076 - 193932 - | fumarate reductase flavoprotein subunit TERM 175 195123 - 195134 + g 75 -5.8 -4.7173 | CCCATAAGGCGATTT GGCT CCAT AGCC TTTTTGGATATGCTC frdC 196853 - 196086 - | fumarate reductase cytochrome b-556 subunit TERM 176 196369 - 196353 - G 70 -5.9 -4.46854 | overlap 196348 ATACAAAAGCCAAAA GTTTTGC GTT ACAAAAC GATAGCTTGAGCCAT TERM 177 197341 - 197368 + G 71 -4.8 -4.56597 | AGGGCATAGCGAGAG GCGAGTGCTTTT AAAG GAAAGCCCTAGC TTTTTGAAAGAAAAA TERM 178 197649 - 197631 - g 78 -3 -5.37593 | overlap 197633 TCTTAAATCAAAAAA CGCCCTTA TTG TATGGGGG GAGCGTGAATGCGCA tpiA 197063 - 197767 + | triosephosphate isomerase fabI 197777 - 198604 + | enoyl-(acyl carrier protein) reductase lpxD 198614 - 199624 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 179 199829 - 199804 - g 75 -2.5 -5.252 | opp_overlap 199805 199810 199823 199825, overlap 199805 GAGCGGGATAAAAAA GCCAAAGTCGC ATGC GAGACTTTAGT TTCTAATGGTTTTTG TERM 180 200010 - 199991 - g 73 -8.6 -3.73224 | opp_overlap 199984, overlap 199975 GCATTGGCGAGCAAA GCCCTGAT ATTA ATCAAGGC GTGGATAGAGAAGAT TERM 181 200170 - 200147 - g 72 -3.2 -5.0538 | overlap 200152 200157 CTCTAGCTCAAAAAA GAAAAGACAA CACC TTGCCTTTTT TAAGGCCTGATGGCA TERM 182 200165 - 200152 - g 79 -3.1 -5.42198 | overlap 200147 200157 GCTCAAAAAAGAAAA GACAA CACC TTGCC TTTTTTAAGGCCTGA metK 199690 - 200847 + | S-adenosylmethionine synthetase TERM 183 201292 - 201303 + G 70 -3 -5.03314 | opp_overlap 201292 GAAAACGCGCACAAT GAAA TCGC TTTC TTTTTTGCCGCTAGA ndk 200914 - 201327 + | nucleoside diphosphate kinase TERM 184 201617 - 201635 + G 70 -3.2 -4.84642 | overlap 201618 201620 201629 TTGATAATTTAGACG TTATTGAA TCT TTCAATGG TTTTATTGATTTGAG jhp0185 201352 - 201708 + | hypothetical protein rpmF 201724 - 201870 + | 50S ribosomal protein L32 plsX 201948 - 202967 + | putative glycerol-3-phosphate acyltransferase PlsX fabH 202991 - 203986 + | 3-oxoacyl-(acyl carrier protein) synthase III jhp0189 204010 - 204312 + | hypothetical protein TERM 185 204321 - 204301 - T 71 -5.4 -4.67904 | opp_overlap 204301 204305 GAGCAAGCTCAAAAA GAAACTCC ATGAA GGGGTTTC TTTAGGAATATTATT TERM 186 204301 - 204321 + T 73 -7.6 -3.62176 | opp_overlap 204301, overlap 204305 GAGCAAGCTCAAAAA GAAACTCC ATGAA GGGGTTTC TTTAGGAATATTATT jhp0190 205385 - 205002 - | hypothetical protein jhp0191 208213 - 205463 - | hypothetical protein TERM 187 206312 - 206301 - G 72 -4.4 -4.67038 | opp_overlap 206301, overlap 206296 TGGTTAAAACTAAAA TGTG ATCC CACA TTATAAAGAAAGCCA jhp0192 208507 - 208250 - | hypothetical protein jhp0193 208604 - 209710 + | hypothetical protein TERM 188 209742 - 209760 + T 72 -8.9 -2.63584 | opp_overlap 209741, overlap 209741 TTTTAAGAAAATACC GCTTGAC TTAGC GTCAAGC CCTTTTGTATTAAAT jhp0194 210956 - 209770 - | putative lipopolysaccharide biosynthesis protein TERM 189 209855 - 209845 - G 73 -5.4 -4.4874 | opp_overlap 209845 TTTAAAAAGCGAAAA TCCT ACA AGGA GTTTAGAAGAAAGCC TERM 190 210108 - 210098 - G 73 -5.4 -4.57569 | TTATCGCCCCAAAAA TGCA ACA TGCA CGCTTCTTTGATGCT TERM 191 210386 - 210374 - G 70 -7.7 -3.68619 | opp_overlap 210377, overlap 210377 TCTAAGTTAGGGAAA GCATC AGC GATGC CGATAGATTTTGCGT TERM 192 210848 - 210838 - G 70 -5.4 -4.40358 | opp_overlap 210838 ATGGATTTGATAAAA GAGT TTT ACTC TCTCTCTCTCTCTCG jhp0195 211139 - 212455 + | putative Outer membrane protein TERM 193 212793 - 212779 - g 100 -3.6 -6.13 | ATAGCCAAAAAAAAA CCTTAA CGA TTAAAG ACAATGGTATAGGCA htpG 212559 - 214424 + | heat shock protein 90 TERM 194 214432 - 214444 + T 71 -7.7 -3.56568 | opp_overlap 214432 CGTTGTAGGAAAAAA CCCTT TTT AAGGG TTTGAAAACTGCTTA TERM 195 214444 - 214432 - T 91 -7.7 -5.14563 | opp_overlap 214432 CGTTGTAGGAAAAAA CCCTT TTT AAGGG TTTGAAAACTGCTTA TERM 196 214610 - 214583 - T 70 -6.4 -4.31329 | gap 1, opp_overlap 214583 214587, overlap 214584 214587 GTAAAAAGCGTAAAA GCCA-GCTAAACG CAG CGTTTAGCTTAAC TTTATTGAAACTAAA TERM 197 214605 - 214587 - T 87 -11.8 -2.76693 | opp_overlap 214583 214587, overlap 214584 214583 AAAGCGTAAAAGCCA GCTAAACG CAG CGTTTAGC TTAACTTTATTGAAA TERM 198 214587 - 214605 + T 91 -11.8 -3.37761 | opp_overlap 214587 214584 214583, overlap 214583 AAAGCGTAAAAGCCA GCTAAACG CAG CGTTTAGC TTAACTTTATTGAAA jhp0197 215373 - 214621 - | hypothetical protein TERM 199 214930 - 214952 + g 95 -14.2 -3.14564 | opp_overlap 214920 214919 214944, overlap 214922 TAAATCCTTAGGCGT GCCTACGCCA TAA TGGTGTAGGC TTCCTAAGACCGTAC dapE 216987 - 215821 - | succinyl-diaminopimelate desuccinylase gidA 218862 - 216997 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 200 218342 - 218359 + g 71 -6.3 -4.30576 | TTGGAAGCATTTTCC CCAAAGC GCCC GTTTTGG TTTTGGTGCTCGCCA TERM 201 218408 - 218418 + g 81 -5.4 -5.14477 | AAAAAAGTGCCTGTG GTGA TGA TCAC TTTTTTAGCTCTGTA TERM 202 220331 - 220346 + G 77 -6 -4.60889 | opp_overlap 220330, overlap 220330 AATCACTTCTAACAC CGCCAC TGCT GCGGCG TTTTTACCGGTGATT jhp0200 218958 - 220604 + | putative transporter cdsA 220617 - 221417 + | CDP-diacylglycerol synthase TERM 203 222273 - 222289 + G 70 -8.7 -3.36175 | opp_overlap 222262 CCCATTAGCGTGGAG CGCTACA CTT TGTGGCG TTATAAAGATTTGTT jhp0202 221418 - 222524 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 204 223311 - 223321 + G 74 -4 -5.1244 | opp_overlap 223311, overlap 223314 TATGACGCTAAAAAG CTTT ATA AAAG TTTTTATATTCCTAA jhp0203 222575 - 223733 + | hypothetical protein jhp0204 224353 - 223802 - | hypothetical protein jhp0205 224473 - 224958 + | hypothetical protein jhp0206 225126 - 226289 + | cysteine desulfurase jhp0207 226311 - 227291 + | nifU-like protein jhp0208 227455 - 227715 + | hypothetical protein TERM 205 227975 - 227963 - g 72 -3.3 -5.11033 | CACAAGTGCAAAAAA GCGTT TCT ATCGC TGAAATTGAACATGA TERM 206 228144 - 228118 - g 75 -8 -4.07687 | overlap 228101 228119 ACTCTGCTTTTAAAA GTGGCTTCTGGC TTA GCCAAAAACCAG CAAAAGGTTTTGTAC TERM 207 228143 - 228119 - g 81 -11.5 -3.04398 | overlap 228101 228118 CTCTGCTTTTAAAAG TGGCTTCTGGC TTA GCCAAAAACCA GCAAAAGGTTTTGTA TERM 208 228622 - 228636 + G 81 -2.8 -5.60993 | opp_overlap 228622 TTGGTAAGCGCCAAA GAAGCT TCA AGCTTG TTTTTTTCTAAAGAA radA 227794 - 229140 + | DNA repair protein RadA jhp0210 229264 - 230343 + | bifunctional methionine sulfoxide reductase A/B protein jhp0211 231581 - 230748 - | hypothetical protein TERM 209 231258 - 231246 - G 73 -7.7 -3.89524 | overlap 231232 AGCGTATTTGATAAA GGTGT AGC ACACC ACCACCACAAACACG TERM 210 231536 - 231519 - G 78 -4 -5.28683 | overlap 231520 ACCAATACCAAAAAA CCCGGC GGTAAT GCCGGT GAATAGCCCCACAAG TERM 211 231795 - 231777 - R 91 -9.6 -4.41348 | opp_overlap 231777 GCGTTTTTAAACAAA CCCCCTTT TTT AAAGAGGG TTTTTAGTAAGCAAA TERM 212 231777 - 231795 + r 80 -7.4 -4.72272 | opp_overlap 231777 GCGTTTTTAAACAAA CCCCCTTT TTT AAAGAGGG TTTTTAGTAAGCAAA jhp0212 233889 - 231799 - | putative Outer membrane protein TERM 213 233268 - 233293 + g 77 -6.2 -4.54727 | gap 1, opp_overlap 233272, overlap 233269 TATTTTTGGAGCTAT TCAAGGCAGGC ATCCC GCCT-CCTTGG TTTTGGTTTAAAGCG TERM 214 234924 - 234906 - g 74 -4.5 -4.96845 | ATAAAAATAAAGAAA CCAAAGC GCAAG GCTTGGG GAATATCATTTCAGG jhp0213 234143 - 235300 + | hypothetical protein TERM 215 235488 - 235501 + T 78 -6.7 -4.40132 | ATTATTCACTTGAGA GCCAA AAAG TTGGC TTTGTTCTCATTAAT hopA 236993 - 235542 - | Outer membrane protein/porin TERM 216 235727 - 235743 + g 70 -8.7 -3.4158 | TGGTGTTGTTGATCT TAGCGCT GTA GGCGCTA TTGGTGATTTTTAAA TERM 217 236298 - 236313 + g 70 -3.2 -4.84642 | opp_overlap 236299, overlap 236299 GTTTTTATTGAAATC AGCGTT GGTA AACGCG TTTTGTTGGTTTGGA TERM 218 237105 - 237125 + r 79 -2.6 -5.89947 | opp_overlap 237101, overlap 237096 TTTTAATAAAATTGG GCAAAAAT TAACC AATTTTGC TTTTTTTTGGATTTA kdsB 237918 - 237187 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 219 237274 - 237289 + g 81 -2.6 -5.55664 | GCTTTCACTTTGAAC GATTTT TACT AGAATC TTTTTTTGGTAATAC jhp0216 238027 - 238824 + | hypothetical protein TERM 220 238967 - 238945 - g 71 -7 -3.96892 | opp_overlap 238951, overlap 238951 AATGCCGATGACAAA CCAAAAGAGC AAA GCTCTTTAAG TCAAAGCGTTCAAAA TERM 221 238961 - 238951 - g 79 -6.8 -4.63479 | opp_overlap 238951, overlap 238945 GATGACAAACCAAAA GAGC AAA GCTC TTTAAGTCAAAGCGT jhp0217 238840 - 239487 + | hypothetical protein TERM 222 240079 - 240089 + G 85 -6.8 -5.02476 | opp_overlap 240076 240079 AATATTGAAGAAGAG CGCA CCA TGCG TTTTTTGCAAGATGT jhp0218 239509 - 240681 + | hypothetical protein jhp0219 240681 - 241211 + | hypothetical protein TERM 223 241308 - 241297 - T 87 -4.4 -5.83211 | opp_overlap 241299 GACCAAAATAAAAAA GCTT GCGT AAGC GATAGTTTCTCATAA TERM 224 241785 - 241773 - T 72 -3.5 -5.13741 | CTAACCTAACAAAAA TTTAT ATT ATAAA AATACGCTAACAAAC TERM 225 241847 - 241833 - T 71 -2.9 -5.19916 | overlap 241824 AAAACATTCAAAAAA TTTTC CTTTT GAAAA TAGACAAAGCCCTAA jhp0220 243054 - 241987 - | hypothetical protein TERM 226 242049 - 242068 + g 72 -3.6 -5.13648 | overlap 242050 CCAATTTACAGCCCT TGTCATAA ATCA TTATGGCG TTTTCTTTATCTTTC jhp0221 243536 - 243165 - | hypothetical protein TERM 227 243349 - 243373 + g 71 -5.1 -4.57882 | overlap 243330 TAAAGGATTTTTTTT TCGCCTTTT TCATAAT AAAAGGTGA TTTCTTGTTGTTCGC hemC 244456 - 243536 - | porphobilinogen deaminase proS 246197 - 244467 - | prolyl-tRNA synthetase TERM 228 245399 - 245422 + g 72 -9.6 -3.04144 | gap 1, opp_overlap 245399 245398 245397 CTGTTTTAAAAAACT CCGCCA-CGCT TGG AGCGCTGGTGG TATTAGGGGTGGGGA hemA 247550 - 246201 - | glutamyl-tRNA reductase TERM 229 246941 - 246956 + g 91 -6.1 -5.38249 | GAGCCATCTCGCCAA GCCCT ATCACA AGGGC TTTTTTATCCTTAAT ispB 248473 - 247550 - | putative octaprenyl-diphosphate synthase jhp0226 248878 - 248483 - | hypothetical protein jhp0227 249155 - 248871 - | hypothetical protein napA 249610 - 249176 - | neutrophil-activating protein A jhp0229 250963 - 249818 - | putative histidine kinase sensor protein TERM 230 250036 - 250022 - G 70 -5.8 -4.46073 | opp_overlap 250033 GGTGAAGACAATAAA TTCATT TTG AATGAA CGCTTCAATTTTGAC TERM 231 250523 - 250545 + g 70 -2.7 -5.17488 | TTGCTTGCCCTGAAT GCTGTTTTG CTGGA CTAAATAGC TTTTGTTTTCATGTT jhp0230 251277 - 250960 - | hypothetical protein flgI 252302 - 251274 - | flagellar basal body P-ring protein TERM 232 251344 - 251359 + g 76 -3.2 -5.25803 | ATTGAAACCATCCCC TTAGCG CTCA CGCCAA TTTTTTGTAAGGCTT TERM 233 253066 - 253076 + G 70 -3.2 -5.00616 | overlap 253056 CCTCCCTAGCGAAGC GCAG ATT TTGC TTTTTTCAGCCACGA TERM 234 253885 - 253869 - g 86 -2.2 -5.95539 | gap 1 CCCCAAACAAAAAAA CGC-AGC ACGA GCCAGCG CACTCTTTTAAAAAG deaD 252488 - 253963 + | ATP-dependent RNA helicase DeaD TERM 235 254034 - 254022 - g 100 -6.3 -5.75538 | TTTAAAAAAGAAAAA TTCTC AAA GAGAA AACCCCACGCCTAAT jhp0233 253984 - 255072 + | hypothetical protein TERM 236 255340 - 255326 - g 75 -7.8 -4.05033 | TTTACCCCATAGAAA CGCGCA TCT TGCACG CTAATCCCTTAAGTT jhp0234 255079 - 255618 + | hypothetical protein jhp0235 257251 - 255701 - | ABC transporter, ATP-binding protein jhp0236 258277 - 257261 - | ABC transporter, permease jhp0237 258627 - 260066 + | putative Outer membrane protein TERM 237 260520 - 260510 - g 85 -6.8 -5.16841 | TGAGACGAATAAAAA CGCT TAT AGCG TTCAAGCCTTGCAAG TERM 238 260748 - 260736 - g 83 -9.1 -4.07568 | TCGGTGTTTTTAAAA GGGCT ATT AGCCC AAATGCAGCTTTTTA jhp0238 260079 - 261494 + | putative Outer membrane protein TERM 239 261511 - 261527 + F 81 -2.3 -5.94597 | overlap 261512 CTCTTTTTAGGGCTT ATAAAGA GGC TCTTTAC TTTTTTTTGGTATTC purA 261593 - 262828 + | adenylosuccinate synthetase jhp0240 262825 - 263253 + | hypothetical protein TERM 240 263503 - 263491 - g 77 -4.9 -4.92239 | CGAAAAACTGAAAAA TTTAG CCG CTAAA GAAGAAGCCTTTAAA jhp0241 263246 - 263914 + | hypothetical protein TERM 241 264193 - 264179 - g 70 -2.8 -5.03314 | opp_overlap 264185 GCTACGCGCAAAAAA GCCCTT TCC AAAAGC TATGGATATTGTTTG TERM 242 264325 - 264312 - g 83 -3.1 -5.60993 | gap 1 CGGTTTAGAAAAAAA CGCGCT AGA AGC-CG GGCTGTTAAAGGGGG jhp0242 263911 - 264966 + | hypothetical protein TERM 243 265575 - 265563 - g 79 -3.3 -5.39721 | opp_overlap 265563, overlap 265556 TTATGACACAAAAAA CGCTT TTG ATGCG ATTGTAGTGGCTAGG xseA 264979 - 266241 + | exodeoxyribonuclease VII large subunit jhp0244 267432 - 266260 - | type II DNA modification (methyltransferase TERM 244 266991 - 267009 + g 74 -9 -3.61178 | overlap 267008 CATTCTTAATCGTTC GCATTAAA TCT TTTAATGC TTTAGCATAAATGGG jhp0245 267883 - 267425 - | hypothetical protein jhp0246 267960 - 268478 + | hypothetical protein jhp0247 268450 - 268659 + | hypothetical protein TERM 245 268720 - 268732 + G 70 -2.7 -5.06735 | opp_overlap 268720, overlap 268714 268720 CGAGCGTTTTAGAGA CTTTT GAA AAAGG TTTTTATGATTTGTG TERM 246 269059 - 269082 + G 84 -8.2 -4.72201 | gap 1, overlap 269043 CTAGCGCACCTTATG CGATCG-CTCC TGT GGAGTTGATCG TTGTTTTTTATAAAA jhp0248 268656 - 269414 + | type II DNA modification (methyltransferase TERM 247 271228 - 271212 - g 76 -4.3 -5.06414 | overlap 271213 271225 GTGGGGCAAGAAAAA GCGCTCA AAG CGATCGC TAAAGCGATTAAAAG clpB 269487 - 272057 + | heat shock protein TERM 248 272412 - 272423 + G 76 -4.4 -5.01042 | ATTATATCGCTGGGG GGAT TGTG ATCC TTTTTGGTTTGCATT ccdA 272114 - 272833 + | putative cytochrome C-type biogenesis protein TERM 249 272902 - 272891 - g 71 -7.2 -3.90762 | overlap 272889 GAGGTTTTAAAAAGA GCGG ACAT CCGC TTAAAAGATTCCCTT TERM 250 273188 - 273201 + G 74 -3.7 -5.03715 | GGGGAAATTTTAATC GCGCC ATCT GACGC TTTTTTAGAACTCAT pyrC_1 272843 - 273979 + | dihydroorotase TERM 251 274293 - 274281 - g 85 -9.1 -4.18197 | AGGGGCTATTCAAAA CGCCA TCA TGGCG CAATTAAAAAGCGGG orf1 273964 - 275193 + | chlorohydrolase jhp0253 275440 - 275682 + | hypothetical protein TERM 252 275913 - 275896 - g 76 -3.4 -5.27779 | opp_overlap 275896 275901, overlap 275897 275909 275910 GCTAAGATCAAAAAA CCCAAC GCCAAA ATTGGG GTTTGCGGCTGCACC TERM 253 275939 - 275909 - g 71 -6 -4.20354 | opp_overlap 275896 275901, overlap 275896 275897 275910 AACCCAACGCCAAAA TTGGGGTTTGCGGC TGC ACCGCAAGCCACAT GGGGGCGGATATTTT TERM 254 275938 - 275910 - g 73 -9.5 -3.1149 | opp_overlap 275896 275901, overlap 275896 275897 275909 ACCCAACGCCAAAAT TGGGGTTTGCGGC TGC ACCGCAAGCCACA TGGGGGCGGATATTT jhp0254 275692 - 277005 + | putative ATP-binding protein jhp0255 277039 - 277692 + | hypothetical protein TERM 255 278079 - 278091 + G 87 -3.4 -5.79595 | opp_overlap 278059 278079 TCAAGCGTTTTAAAA TCCA GGATG TGGA TTTTTTGTTTTCGCC TERM 256 278551 - 278519 - g 71 -4.2 -4.83615 | gap 1 GACTTTGTAGAAAAA GTGGTTGTTTTAGAC AGCT GTC-AAATCCACCAC AAGGCGTTAATGCAT jhp0256 277685 - 278668 + | hypothetical protein jhp0257 278658 - 279191 + | hypothetical protein TERM 257 279384 - 279369 - g 79 -3.2 -5.51165 | AAAATCGTAAAAAAA GCGTTT TAGA ATACGC GCAAAGGCATTTTGA TERM 258 279443 - 279455 + G 74 -4.9 -4.77036 | opp_overlap 279443 AAAGAAACCAGCGAA TCTTT GTT AAAGA TTTTTAATGATGAAG jhp0258 279188 - 279727 + | hypothetical protein jhp0259 279744 - 280142 + | hypothetical protein jhp0260 280179 - 281474 + | hypothetical protein TERM 259 281598 - 281633 + G 73 -7.6 -4.07568 | opp_overlap 281594 CTCAAACTAAAGATT GCGTTTTTGCAACCCC TGAT GAGGTTTTAGAAACGC TTTTGAAAGAAAACA jhp0261 281462 - 282019 + | hypothetical protein jhp0262 282076 - 282330 + | ferredoxin gppA 282340 - 283794 + | guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase waaC 283791 - 284801 + | lipopolysaccharide heptosyltransferase-1 waaM 284798 - 285784 + | lipid A biosynthesis lauroyl acyltransferase TERM 260 285835 - 285808 - T 95 -8.7 -4.98255 | opp_overlap 285816, overlap 285828 GTGGAATGATAAAAA TTAAAAAATGC TAAAAG GCATTTTTTAA AAATAAATAGTAAAG TERM 261 285869 - 285852 - T 77 -8.5 -3.61641 | AATAAATAGTAAAGA GCTTGAT TTTA ATCAAGC GATAATTTCTTAAAG TERM 262 286034 - 286060 + T 70 -4.5 -4.8543 | gap 1 AAAAGTTTTAGTTAT TACCACTCAATG CGAA CAA-GAGTGGTA TTTTTCTAAAAATTC tgt 287155 - 286040 - | queuine tRNA-ribosyltransferase TERM 263 286158 - 286146 - G 76 -3.4 -5.27938 | AGCTCTAAATAAAAA TGCA AATTG TGCA AGCTGGCCAAACGAG TERM 264 288308 - 288331 + G 70 -3.2 -4.86133 | opp_overlap 288312, overlap 288312 ATGAAAGTTTAAGCA TTAATGAAGA CATG TCTTCAGTGA TTTTTGATGTGTCTA jhp0267 287212 - 288648 + | hypothetical protein TERM 265 289151 - 289137 - g 73 -5.7 -4.57073 | opp_overlap 289136, overlap 289139 TAGCTTTTTTAAAAA CCCTT GAAAA AAGGG AATTTCAAGCGGGGG aroB 288653 - 289684 + | 3-dehydroquinate synthase TERM 266 290052 - 290068 + G 71 -5.1 -4.49556 | TATCGCTAACCCTAT TGCGATC ATT GATGGCA TTTCTTTCATCAAGA jhp0269 289675 - 291246 + | hypothetical protein TERM 267 291550 - 291571 + G 76 -4.5 -5.1675 | opp_overlap 291561 AAGAAAAGATTAACG CGCTTTT ACAAGAAA AAAAGCG TTTTTTCATAGATGA jhp0270 291243 - 292499 + | hypothetical protein TERM 268 293232 - 293212 - g 100 -12.7 -5.00616 | GCTGGGGCTAAAAAA GTGCATGAA CTT TTCATGCAC GCTAAAAAACATGCC TERM 269 294058 - 294046 - g 83 -9.1 -4.09685 | opp_overlap 294046 294045, overlap 294032 CTGGAGTTTTTAAAA CCGCA AAT TGCGG CTTGTAAGCGGTTGA ftsH_1 292486 - 294138 + | ATP-dependent zinc metallopeptidase TERM 270 294425 - 294439 + G 73 -7.1 -4.07568 | GGAAGTGGGATTGGA CGCTC AATTG GAGCG TTTTAAAAAAGAGGG TERM 271 294501 - 294512 + G 70 -3 -5.06414 | opp_overlap 294492 TACAAGTATAGTGAT TCTA TAAT TAGA TTTTTATTGGAAAAG jhp0272 294141 - 294659 + | hypothetical protein jhp0273 294672 - 295145 + | hypothetical protein TERM 272 296141 - 296162 + G 72 -4.4 -4.67038 | opp_overlap 296142, overlap 296142 TTAACGCTACCAATA ATACCGCT TTTAAT AGCGGTAG TTTTACTTTTAAAGG TERM 273 296161 - 296142 - g 70 -7.9 -3.73534 | opp_overlap 296141 296142 TAACGCTACCAATAA TACCGCT TTTAAT AGCGGTA GTTTTACTTTTAAAG TERM 274 298797 - 298787 - g 70 -8.2 -3.68351 | opp_overlap 298787 298786 CCGGCAGTATTGAAA GCGG GAA CCGC ATTTCTAGCGGTGGG TERM 275 303055 - 303070 + G 70 -3.2 -4.86001 | AAGCGTTTTAGCGAT CCTAAC CCTA GTGAGG TTTTTGTCAAATACT jhp0274 295213 - 303921 + | putative vacuolating cytotoxin (VacA) paralog TERM 276 304335 - 304321 - g 90 -8.6 -4.88407 | TTATGGAATTAAAAA CGATTG AAA CAATCG CTCAATCTTTAGGGA lysA 303969 - 305186 + | diaminopimelate decarboxylase jhp0276 305191 - 305493 + | hypothetical protein TERM 277 306216 - 306196 - g 80 -6.1 -4.71061 | overlap 306173 306171 ATCCACATTGAAAAA GCCCGCA CAGATAT TGCAGGC GCGTATCAAATCATC jhp0277 305506 - 306378 + | hypothetical protein TERM 278 306807 - 306818 + G 70 -5.8 -4.37886 | opp_overlap 306806 306807 ACACAACCAAAACAC GCCT TTTA AGGC TTTTATAGAAAATGA TERM 279 307267 - 307255 - g 74 -4.7 -4.89393 | opp_overlap 307255 307253 GAAAGTTTAGAAAAA CGCCC TAG GGGGG TGTATTGTGGGGCGA pabB 306379 - 308082 + | p-aminobenzoate synthetase amiE 308210 - 309229 + | acylamide amidohydrolase flgL 312040 - 309554 - | flagellar hook-associated protein FlgL TERM 280 311663 - 311645 - G 73 -2.3 -5.27335 | opp_overlap 311649, overlap 311646 311647 GCCTCCAAATAAAAA TTCCCCC CCTAT GGAGGTA TTAGCGACATTTATC rplU 312283 - 312597 + | 50S ribosomal protein L21 rpmA 312611 - 312877 + | 50S ribosomal protein L27 TERM 281 313669 - 313656 - g 85 -6.7 -5.0133 | GAGTTGGCTAAAAAA CCTGT TGGG ACAGG GCCTTTCAAATTCTT TERM 282 313711 - 313729 + G 70 -8.2 -3.62046 | opp_overlap 313708 313711 AAGATGAGAAAATCA TTCTGGTT AAA AACCAGGA TTATTGGGGGCCTAA dppA 312996 - 314636 + | periplasmic dipeptide transport substrate-binding protein dppB 314647 - 315651 + | peptide ABC transporter permease dppD 316516 - 317379 + | peptide ABC transporter ATP-binding protein dppF 317376 - 318182 + | peptide ABC transporter ATP-binding protein obgE 318202 - 319284 + | GTPase ObgE jhp0289 319480 - 320475 + | hypothetical protein TERM 283 320932 - 320919 - g 73 -6.7 -4.1413 | AAGATAGTTTGAAAA CCCTT TTAG AAGGG GCGAATGCGAGCATG jhp0290 320741 - 321295 + | hypothetical protein TERM 284 322351 - 322375 + G 83 -5 -5.27335 | opp_overlap 322318 CATCGCTTTAGAGAC GCTCAACATG GGGAG CATGTTTGGC TTTTTCTTTAACGAA hemL 321305 - 322597 + | glutamate-1-semialdehyde aminotransferase jhp0292 322587 - 322865 + | hypothetical protein jhp0293 322881 - 323285 + | hypothetical protein jhp0294 323369 - 324253 + | hypothetical protein jhp0295 324266 - 325147 + | hypothetical protein TERM 285 325158 - 325145 - f 77 -4.5 -5.16237 | opp_overlap 325154, overlap 325154 AACCCTAGGAAAAAA TAGCG ATAA CGCCA AAAAGATTTTTGGCG TERM 286 325154 - 325173 + F 93 -10.8 -4.06055 | opp_overlap 325145 325154 AAAAAATAGCGATAA CGCCAAAA AGAT TTTTGGCG TTTGATTTGGGAGAT TERM 287 325173 - 325154 - f 87 -10.8 -3.49898 | opp_overlap 325154, overlap 325145 AAAAAATAGCGATAA CGCCAAAA AGAT TTTTGGCG TTTGATTTGGGAGAT TERM 288 325336 - 325326 - g 73 -6.8 -4.28774 | CCAGGGAACGCAAAA GAGC GAG GCTC AAACGGGTGGGGTTG jhp0296 325193 - 325561 + | hypothetical protein TERM 289 326473 - 326492 + G 80 -8 -4.38712 | opp_overlap 326466 326472 326473, overlap 326466 GAAAAAATCTTAAAT TCCTTAAA GGGT TTTAAGGA TTTTCTCGGCATCAA jhp0297 325561 - 326526 + | hypothetical protein jhp0298 327677 - 326532 - | hypothetical protein jhp0299 328633 - 327878 - | hypothetical protein TERM 290 328190 - 328180 - G 79 -5.4 -4.87665 | TTCTAGCTACAAAAA TTGC CAA GCAA AAACAAAACAATGCG jhp0300 329334 - 328633 - | ABC transporter ATP-binding protein jhp0301 330662 - 329907 - | hypothetical protein TERM 291 329968 - 329956 - G 70 -7.7 -3.66784 | overlap 329953 TTATCCCCAACATAA GCGAT TTT ATCGC CTAAAATGTCATAAG TERM 292 330218 - 330234 + g 74 -6.5 -4.40561 | opp_overlap 330218, overlap 330216 CTTCTAAAAACATCA CTTCCAC ATT GTGGGGG TTGTTTTTAAGACCC TERM 293 330665 - 330697 + r 87 -10.9 -3.40403 | opp_overlap 330665 TACGATTAAGCAAAA TATTCTCCTTATTTT TTA AAAATAATGAGAATA TTATAATCAAAAAAA TERM 294 330697 - 330665 - R 100 -10.9 -4.46615 | opp_overlap 330665 TACGATTAAGCAAAA TATTCTCCTTATTTT TTA AAAATAATGAGAATA TTATAATCAAAAAAA argS 332564 - 330939 - | arginyl-tRNA synthetase TERM 295 331105 - 331120 + g 72 -3.2 -5.00884 | overlap 331107 TCTGAGGCGAGGGTT TTTGCG TATT CGCACA TTTTTTGCAAGCCGT jhp0303 332806 - 332567 - | hypothetical protein gmk 333498 - 332878 - | guanylate kinase TERM 296 333149 - 333163 + g 71 -5 -4.61231 | ATAAAGACTGAGCAT GCGTTA GGG TAATGC TTTTTAAGGATCTCA jhp0305 334996 - 333491 - | poly E-rich protein TERM 297 334296 - 334315 + g 73 -8 -3.8613 | TCTAATTCTTCTTGC GTTTCTAA TTCT TTAGAAAC TTCTTCATCTTTGGG TERM 298 334625 - 334658 + g 100 -11.7 -5.40474 | TGGGTCTAAATTCTG GCTAGGCTCTAGCTC GCTT GCGTTAGAGCCAAGC TTTTTTTGAAGGACT TERM 299 334723 - 334698 - G 76 -4.7 -5.02074 | opp_overlap 334717, overlap 334721 TCAGTGGGTAAAAAA GGCTTTTTGAT TTTC ATCTCAAAGCC CTCTAAAAAGGGCTG jhp0306 335138 - 335680 + | putative endonuclease jhp0307 336425 - 335688 - | putative Outer membrane protein TERM 300 336005 - 335995 - G 70 -3.2 -4.84359 | TCATCTTGATAAAAA CTCC CTT GGAA GAAATTCCATATCGC flgH 336559 - 337272 + | flagellar basal body L-ring protein TERM 301 337648 - 337634 - Tf 72 -5 -4.77567 | opp_overlap 337634 337638, overlap 337629 337638 ATTTTTACAAGAAAA GCATTT ACA AAACGC TTTTGAAACTTTAAA TERM 302 339024 - 339035 + GT 89 -4.4 -5.63517 | TCTCAAAAATTCGCC TAGC CACC GCTA TTTTTTGTTTAAAGA TERM 303 339118 - 339134 + GT 79 -5.1 -5.02074 | opp_overlap 339132 AAGCATGGGTATTTG GGGATTT ATA AAAACCC TTTTTTGAAAAATAA TERM 304 339152 - 339132 - gT 84 -6.9 -4.87665 | opp_overlap 339118 GGGGATTTATAAAAA CCCTTTTTT GAA AAATAAGGG GGGAACTATTTTAAA lpxK 340258 - 339320 - | tetraacyldisaccharide 4'-kinase flaG 338845 - 339387 + | putative flagellar biosynthesis protein nadE 341037 - 340255 - | NH(3)-dependent NAD+ synthetase TERM 305 340954 - 340968 + g 85 -2.8 -5.81032 | opp_overlap 340954 340956, overlap 340956 GCTCAGCCCGTAAAC GACTTT TTT AAAGCC TTTTTTTTGAACTTC TERM 306 342132 - 342121 - g 70 -3 -5.10497 | AACGCATGCAAAAAA TCTT AAAA AAGA TTCAAAACGGTGCAT ilvC 341286 - 342278 + | ketol-acid reductoisomerase TERM 307 342579 - 342548 - g 70 -3 -5.02231 | overlap 342541 TAAAAAGACTAAAAA CCTTTCTTTTTTAG CGGC CTCACAAAGTAAGG ATAAAAATATTTTAG minD 342303 - 343109 + | cell division inhibitor TERM 308 343150 - 343136 - g 70 -3.4 -4.85782 | overlap 343138 343140 TTTTTTAAAAACAAA GGGAGC GCG GCCACC GCAACCGATAGATTA minE 343106 - 343339 + | cell division topological specificity factor MinE TERM 309 343842 - 343826 - g 84 -7.9 -4.67011 | AAGCGGATTTAAAAA GCGGCTC TAT GAGCAGC GCGAGATTAGCCCAG jhp0316 343351 - 344151 + | hypothetical protein jhp0317 344148 - 344552 + | Holliday junction resolvase-like protein TERM 310 345389 - 345375 - g 74 -4.3 -4.8543 | overlap 345388 CAAGGCGTAGAAAAA GACTT AACAA AAGTC GCTTATCTTTATTCT jhp0318 344811 - 345566 + | hypothetical protein jhp0319 345751 - 346089 + | hypothetical protein jhp0320 346073 - 346633 + | hypothetical protein jhp0321 347685 - 346804 - | hypothetical protein recJ 349235 - 347685 - | putative single-stranded-DNA-specific exonuclease RECJ TERM 311 348507 - 348521 + g 74 -6.4 -4.386 | opp_overlap 348481 348503, overlap 348481 348481 AAAAGAAATATCGCT CGCTTT CAA AGAGCG TTTTCTAAAAACTTC pyrG 350861 - 349245 - | CTP synthetase TERM 312 349573 - 349586 + g 70 -3.1 -4.86773 | overlap 349551 349581 CCTAAAGGCGAATTA TAGGT GCGC ACCTG TTTTTGGTGGTTTTG jhp0324 351122 - 351784 + | hypothetical protein TERM 313 352747 - 352737 - g 100 -3.2 -6.17268 | TTAGAAGAAAAAAAA GAAG GCG CTCC TAAAAAACAAGTTGG fliF 351828 - 353531 + | flagellar MS-ring protein fliG 353548 - 354579 + | flagellar motor switch protein G fliH 354566 - 355342 + | flagellar assembly protein H TERM 314 355740 - 355714 - g 77 -9.4 -3.53012 | opp_overlap 355733, overlap 355733 GTGGGGGTGGCTAAA GCCTTTCGTTTG AAA CAAACGCTAGGC ATGCCTATCGCTTTA TERM 315 355750 - 355733 - g 70 -5.5 -4.41348 | opp_overlap 355733 355740 355742, overlap 355714 TTCGTTTGAAACAAA CGCTAGG CATG CCTATCG CTTTATTAGGCGATG TERM 316 356019 - 356031 + G 72 -3.3 -5.03145 | ATCTTTTAAACTCAT CACCC CGG GCGTG TTTTTTGAAGAATTG dxs 355339 - 357195 + | 1-deoxy-D-xylulose-5-phosphate synthase lepA 357192 - 359006 + | GTP-binding protein LepA TERM 317 359060 - 359038 - gf 89 -8.6 -4.58236 | opp_overlap 359056 GACAAAACATGAAAA CTATGAAATT TTA AATCTCATAG GCTATGCTTTGGCAA jhp0330 359021 - 359779 + | hypothetical protein jhp0331 359722 - 360018 + | hypothetical protein TERM 318 360260 - 360239 - g 87 -5.1 -5.42458 | AATAAAAAAAATAAA CATGCAAAC ACAC GCATGCATG GAAATTTTTCACAAG jhp0332 360050 - 360310 + | hypothetical protein flgG_1 361147 - 360338 - | flagellar basal-body rod protein kgtP 362516 - 361203 - | alpha-ketoglutarate permease TERM 319 362319 - 362298 - G 73 -2.1 -5.18357 | overlap 362302 CAATTTACCAAAAAA CAAACTCCC CAAA GGGCGCATG AAAAACCCTAGCATA TERM 320 362315 - 362302 - G 74 -3.7 -5.0917 | overlap 362298 TTACCAAAAAACAAA CTCCC CAAA GGGCG CATGAAAAACCCTAG TERM 321 362863 - 362849 - R 77 -4.4 -5.1361 | opp_overlap 362849, overlap 362840 362859 ATAAAGTTTAAAAAA TTTTAA AAA TTAAAA ATAATTTTTTTATTG ftsK 365436 - 362902 - | septum formation protein TERM 322 364412 - 364428 + g 75 -2.9 -5.28561 | overlap 364402 AGTGGGCTAAAGCTT GGAGCGT TTT GCGTTTC TTTTTCTTCTATATT TERM 323 364899 - 364917 + g 74 -3.8 -5.03314 | overlap 364899 TTTGAGAATCTGATG GGGTGTTT TCA AAACCCTC TTTTTTCAGGCTAAA jhp0336 367769 - 365433 - | hypothetical protein TERM 324 365474 - 365488 + g 70 -2.9 -5.03314 | opp_overlap 365474 AGCAGTATTCACAAT CTTTA ACCTC TAAAG TTTTTTCAAAATCAA TERM 325 365893 - 365906 + g 73 -2.3 -5.24129 | GTGATTTCTGCATTA AAGCG TTCT CGCTC TTTTTTATAAAAAGC TERM 326 366692 - 366710 + g 76 -3.1 -5.27938 | gap 1, opp_overlap 366692, overlap 366686 GCATGATTTGAGAAT GCGCTTCT TTTA AGG-GCGC TTTTTCTTTAGAGCT TERM 327 367527 - 367538 + g 95 -3 -6.23545 | AAAAAGCAAAAGCCC TTCA AGAA TGAA TTTTTTTTCTTTAGC TERM 328 367739 - 367754 + g 77 -4.8 -4.92314 | AAACAAACAAGGGGG CTTTTT CTAA AAAAAG TTTTTCTAAATTCAT tktA 369691 - 367766 - | transketolase TERM 329 368803 - 368816 + g 74 -3.9 -5.07053 | TAACTTTCACTTCTT CAAAA TGCA TTTTG TTTTTTGGGCTAATT TERM 330 369649 - 369635 - G 79 -5.7 -4.96848 | opp_overlap 369634 369640 GTCCGCACACAAAAA GCGAA GCGTG TTCGC CATGCTTTTTAATCG ribF 370580 - 369738 - | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 331 370502 - 370490 - GR 77 -6.2 -4.59853 | TTAATTCCTTAAAAA GGGC TTGAT GCCC TAGATGCAAGCCATC hlyA 371253 - 370546 - | putative hemolysin TERM 332 371120 - 371142 + gr 78 -9.2 -3.53091 | opp_overlap 371141 AGTTCAATTTGATCG CCCTCTTTAA CGA TAAAAGAGGG TTTAGAAACCACCAT jhp0340 371762 - 371253 - | hypothetical protein TERM 333 371746 - 371736 - G 79 -3.2 -5.47964 | ACAAAAGAATAAAAA CACC AGA AGTG TTGAGAGATTTTTCA pyrB 371835 - 372758 + | aspartate carbamoyltransferase catalytic subunit TERM 334 373031 - 373045 + G 75 -2.9 -5.3236 | TGAAAAATAGCGCGC CTTTA AAGAA TAAAG TTTTTTGTGGGTTAT TERM 335 373795 - 373812 + G 74 -4.8 -4.7416 | opp_overlap 373795 ACTTACGAAAGGAAA GGGGTT AGCGTC AGCCCC TTTTTCCAGTTTTCG jhp0342 373015 - 374454 + | putative Outer membrane protein TERM 336 374586 - 374608 + G 75 -2.8 -5.33124 | opp_overlap 374587 374590, overlap 374587 TAAATACCTTAAAGA ACATTATAAA AGT TTTATAGTGG TTTTATTTTCTTCTT TERM 337 375792 - 375804 + G 70 -5.5 -4.32857 | AAAGATTAGCGTTGT CACTC AAA GGGTG TTTATCTTTAACGGG msbA 374545 - 376200 + | multi-drug resistance protein TERM 338 376408 - 376389 - g 75 -2.8 -5.23016 | gap 1 AAAGAATTTAAAAAA GCG-CTCGC CCA GCAAATCGC TTATTTTTTAAAGGA TERM 339 376792 - 376781 - g 70 -5.8 -4.37886 | GGAGGGTTTAGAAAA GCGT TTGA ACGC TATAGAAAATGCGGC jhp0344 376194 - 376817 + | hypothetical protein TERM 340 376822 - 376842 + G 82 -4.1 -5.47964 | CATGGCTTTAGGGCA TGAAAAAGA TTT TATTTTTCA TTTTTGTTGTTTTGT TERM 341 376957 - 376968 + G 72 -3.6 -5.1615 | TTTTAAAATTGTTCG CGCT TCTT GGCG TTTTTTCAATATTAG jhp0345 376821 - 377390 + | hypothetical protein jhp0346 377523 - 378668 + | hypothetical protein TERM 342 378970 - 378956 - g 75 -2.8 -5.34381 | AAATTCAAAGAAAAA GGGA CTGATTT TCCC AAAGAACAAATCTTT jhp0347 378854 - 379357 + | hypothetical protein TERM 343 379625 - 379615 - g 84 -8.2 -4.8143 | opp_overlap 379612, overlap 379607 CCAACAAGGCAAAAA CGCC TAT GGCG TGGGGTTTTACTTTT TERM 344 380202 - 380216 + G 77 -4.9 -4.87786 | CCATCACCGCCTTGA GCGTG TTTAT CGCGC TTTTTATCGGGTTGA nixA 379415 - 380410 + | high-affinity nickel-transport protein jhp0349 380935 - 380414 - | hypothetical protein TERM 345 380754 - 380767 + g 72 -3.1 -5.00884 | TCTTCCAAACCCATG CTCTT ATTC AGGAG TTTTTTACAAGCGAT TERM 346 381010 - 381020 + H 71 -5.4 -4.72333 | opp_overlap 381009 381010 AACTTTAAAAAACAC CCTT AAA AAGG TTTTTAGGTATAATT TERM 347 381165 - 381146 - g 74 -4.2 -5.06585 | overlap 381147 GAAACGATAGAAAAA GCCCCTAC AAAT GTAGAGGA TAGAGACAAAGCCCC TERM 348 381164 - 381147 - g 70 -7.7 -3.62324 | overlap 381146 AAACGATAGAAAAAG CCCCTAC AAAT GTAGAGG ATAGAGACAAAGCCC jhp0350 381071 - 382387 + | hypothetical protein jhp0351 383227 - 382409 - | hypothetical protein copP 383626 - 383426 - | copper-associated protein copA 385864 - 383627 - | copper-transporting P-type ATPase TERM 349 383938 - 383960 + g 70 -9.8 -2.71364 | TCACCACCGCCACAT CGCTCATAGC AAG GCTAGGGGCG TCATTCAAGCCATCG TERM 350 385871 - 385889 + r 76 -6.2 -4.66833 | TTCTTTCATGCGCTT TTATTTTT ATT AAAAATAA TTTTTACCATTAAAA pssA 386574 - 385861 - | phosphatidylserine synthase jhp0355 386824 - 386564 - | hypothetical protein TERM 351 386703 - 386684 - G 84 -7.9 -4.81863 | opp_overlap 386686 386686, overlap 386699 AAACTTACAAGAAAA GAGCGTT AGAGCA AACGCTC TATAACGCTGTTGAT ftsH_2 388725 - 386827 - | ATP-dependent zinc metallopeptidase TERM 352 387901 - 387942 + g 73 -5.9 -4.62085 | overlap 387900 AGCCGCTCTGCTCTT GCCTATGGCATCAATTTCA TCAA TAAAAATGATGCTAGGGGC TTGTTTTTTAGCGGT prmA 389723 - 388734 - | ribosomal protein L11 methyltransferase TERM 353 389403 - 389391 - G 70 -5.5 -4.47686 | opp_overlap 389391 389394 389399 GTAGAAAAAATCAAA CTCGC TTT GCAAG CTTTGCTTTAAGTTC TERM 354 389437 - 389427 - G 70 -3.2 -4.90525 | TAAGTTCAAACAAAA CGCT TCT AACG CCGGAAAAAGCGAAT TERM 355 389674 - 389654 - G 71 -6.9 -4.07568 | overlap 389658 GTGTGGTGTCTAAAA GAAAGCTCT CAA AAAGCTCTC GCTCCTTAGGGAAGA cheY 390098 - 389724 - | response regulator jhp0359 390392 - 390994 + | putative Outer membrane protein jhp0360 391547 - 391140 - | hypothetical protein jhp0361 391843 - 391550 - | hypothetical protein gidB 392322 - 391786 - | glucose-inhibited division protein B queA 393356 - 392319 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase jhp0364 394106 - 393357 - | hypothetical protein TERM 356 393566 - 393550 - G 75 -9.5 -3.32405 | opp_overlap 393550, overlap 393540 393548 AAAATCACTACAATA GCGTATT TGA AATACGC TTTCAAGCTCGCATC TERM 357 393550 - 393566 + g 77 -9.5 -3.57462 | opp_overlap 393540 393550 393548 AAAATCACTACAATA GCGTATT TGA AATACGC TTTCAAGCTCGCATC jhp0365 394581 - 394099 - | sec-independent translocase ruvB 395658 - 394648 - | Holliday junction DNA helicase B TERM 358 395369 - 395384 + g 79 -3.2 -5.39721 | overlap 395373 395378 AAATTAGTCAAAATG GCGG CTAAATCA CCGC TTTTTTCTATCATGG TERM 359 395684 - 395695 + r 74 -5.8 -4.63527 | CTTTCTAATTCGTTA GGGA AGTT TCCC TTTTTCACATCGTCA panB 396471 - 395659 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 360 395844 - 395864 + g 79 -5.4 -4.86862 | CGCAATCCTTGCCGC TCCCTATG CCGAT CGTGGGGA TTTTGATTTTTTGCG jhp0368 396622 - 397344 + | hypothetical protein jhp0369 397322 - 398191 + | hypothetical protein TERM 361 398316 - 398306 - g 75 -2.6 -5.2422 | AATTAGACGAAAAAA TAAA CAA TTTA AAGCGACAGCTCACC TERM 362 398447 - 398423 - g 77 -5.2 -4.86731 | TTTCTTCAAAGAAAA GAAAAAAATT GCTCA AATCTTTTTC CATAGCCGATGATAA TERM 363 398710 - 398724 + G 86 -2.1 -5.9362 | gap 1, overlap 398710 GAGAACGCGCTCAAG C-AGCC TGTA GGCTCG TTTTTTTATGTTTTA jhp0370 398203 - 399144 + | hypothetical protein jhp0371 399154 - 400476 + | hypothetical protein TERM 364 401007 - 400966 - g 76 -4.7 -5.07652 | gap 1, opp_overlap 400956 TTTTTCAAAACAAAA TTTTGTCT-CTAAAAGAGGT TGA ACGGCTTTTAGTAAACAAAA ATATTAAAATAATCA minC 400479 - 401063 + | septum formation inhibitor lpxC 401060 - 401947 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase jhp0374 401969 - 402466 + | hypothetical protein thrB 402520 - 403401 + | homoserine kinase jhp0376 403373 - 403642 + | hypothetical protein TERM 365 405152 - 405130 - g 77 -4.8 -4.89605 | overlap 405131 GAAAAAAATAACAAA TGGGTGTC TTTCATT GACACCCC AGGGCATGAAGCCTT TERM 366 405151 - 405131 - g 72 -8.3 -3.50103 | overlap 405130 AAAAAAATAACAAAT GGGTGTC TTTCATT GACACCC CAGGGCATGAAGCCT TERM 367 405763 - 405753 - g 70 -5.4 -4.39828 | AATAGGGGTAGAAAA CGAT TCT ATCG CGCGCTTGCAAGCTC infB 403639 - 406488 + | translation initiation factor IF-2 TERM 368 406729 - 406743 + G 76 -7.2 -4.21462 | GGTGGTTTAAATGCC CAAAAC TCA GTTTTG TTTTAGATGATAGCT rbfA 406488 - 406823 + | ribosome-binding factor A jhp0379 406816 - 407256 + | hypothetical protein jhp0380 407417 - 408529 + | hypothetical protein TERM 369 409488 - 409465 - g 76 -4.6 -5.03747 | gap 1, opp_overlap 409472, overlap 409474 AAATCCGCCAAAAAA TGGATAAACCC TTG GGGATT-TCCA CGGTTGAAACCGTAA jhp0381 408882 - 409553 + | putative transcriptional regulator jhp0382 411389 - 410346 - | hypothetical protein TERM 370 410719 - 410734 + g 85 -4 -5.58209 | gap 1 GTTTCTGTAGTAGGG TCGCCTC CTA GAG-CGA TTTTTTTGAGTTTGA TERM 371 411337 - 411324 - G 74 -3.9 -5.04385 | GATATTTTTAAAAAA TTGTT TTGA AACAA GCTGGCATGCATAGC flhA 413624 - 411423 - | flagellar biosynthesis protein FlhA TERM 372 412993 - 412981 - G 70 -7.7 -3.62644 | opp_overlap 412980 412981 412990 GTGATAATGATAGAA GCGAT CGC ATCGC CTTTGACGAATTTAG TERM 373 413530 - 413510 - G 77 -10.5 -3.42574 | overlap 413524 GTAACGGCACGATAA TGATCGCCA AAA TAGCGATCA CAAAGACCACAAGGG rpsO 413760 - 414032 + | 30S ribosomal protein S15 TERM 374 414651 - 414637 - g 81 -5.8 -5.0925 | TCGCAAAATCAAAAA GAAAAA CTT TTTTTC ACCCTTTCTGTTTTC TERM 375 414706 - 414716 + G 76 -6.8 -4.45517 | AGCGCTACAAGGAGC GCGA CAA TCGC TTTTGTGGCTACTTT jhp0385 414088 - 415377 + | hypothetical protein aroD 415490 - 416002 + | 3-dehydroquinate dehydratase TERM 376 417004 - 417025 + G 76 -4.3 -5.0538 | overlap 417005 GGTGTTTTCTGTAGA GCCTGGGAT TTAT ATCCCTGGG TTTTTTGGGGTGCGC TERM 377 417005 - 417024 + G 70 -7.8 -3.62746 | overlap 417004 GTGTTTTCTGTAGAG CCTGGGAT TTAT ATCCCTGG GTTTTTTGGGGTGCG pepQ 416015 - 417088 + | putative proline peptidase TERM 378 417118 - 417143 + G 89 -9.1 -4.83169 | overlap 417110 417119 ACTAACCGCTTTTTC CCAAGCCTTTT TAAA AAAAGGCTTGA TTTTTCTAACAGAGT TERM 379 417119 - 417142 + G 90 -12.6 -3.49419 | overlap 417110 417118 CTAACCGCTTTTTCC CAAGCCTTTT TAAA AAAAGGCTTG ATTTTTCTAACAGAG TERM 380 417459 - 417487 + G 73 -10.5 -2.78996 | opp_overlap 417464, overlap 417458 417464 TATTATCGCTTTCAA TCAAGTCATTTTG AGG CAGAATGATTTGA CTTTACCTCACCCTA folK 417085 - 417576 + | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase flhF 417573 - 418940 + | flagellar biosynthesis regulator FlhF jhp0390 418937 - 419821 + | hypothetical protein jhp0391 420109 - 419834 - | hypothetical protein fliA 420118 - 420885 + | flagellar biosynthesis sigma factor fliM 420878 - 421942 + | flagellar motor switch protein FliM jhp0394 421946 - 422803 + | flagellar motor switch protein FliY TERM 381 423073 - 423058 - g 71 -7.6 -3.89903 | AAAGAGGGCGAGAAA GGCTTT TTTG AAAGCC ACCGACAATATGTGG jhp0395 422833 - 423369 + | hypothetical protein jhp0396 423366 - 423869 + | hypothetical protein fur 424341 - 423889 - | ferric uptake regulation protein jhp0398 425676 - 424501 - | recombination factor protein RarA TERM 382 424548 - 424533 - G 76 -7.6 -4.15453 | opp_overlap 424531 CAAGCCATTCTAAAA GGGTTT TTTC AAACCC TATGCCTTGAGAAGA TERM 383 424895 - 424878 - G 82 -7.7 -4.56597 | opp_overlap 424878 CTTCGCTCGCAAAAA TCACCAG CCTT CTGGCGA TAAATTCCGGGTTTT TERM 384 425135 - 425117 - G 73 -10.2 -2.79983 | opp_overlap 425116 425113 425117, overlap 425116 AAAAGGTTTAATAAC GCTCTGGC ATC GCCAGCGC TGTTGTTTAAAAGAT TERM 385 425117 - 425135 + g 79 -10.2 -3.54755 | opp_overlap 425117 425116, overlap 425116 425113 AAAAGGTTTAATAAC GCTCTGGC ATC GCCAGCGC TGTTGTTTAAAAGAT TERM 386 425157 - 425171 + g 74 -4.2 -5.0666 | TTAAAAGATAGGTTT TAGCGC CAG GCTCTA TTTGTTTTTTGAGTA TERM 387 425626 - 425645 + g 74 -5 -4.81249 | overlap 425627 TATTAAATGTTCTTG GCCTAAAA ATTC TTCTAGGC TTTTTGGGTTTAAAA jhp0399 426044 - 425673 - | putative transcriptional regulator dnaJ_1 426920 - 426054 - | putative co-chaperone with DnaK TERM 388 426631 - 426603 - G 74 -6.1 -4.4017 | overlap 426605 CGAATTTTGAGAAAA TCTTTGCGAAAAG CCT CCTTTCCCAAAAA TAGAGCTTAAAATAT TERM 389 426713 - 426740 + g 70 -2.7 -5.14163 | overlap 426714 GCCCGCCAAACATGT TGTCGCCAA ATTGATCGTA TTGGCGGCG TTTTTCTTCATCGCT TERM 390 427234 - 427253 + G 72 -10 -2.74248 | opp_overlap 427234 427224, overlap 427233 AGGGACGCAAAAAAA CCCTCACA GCTA TGTGGGGG CTTTAGCGCGTCTTG TERM 391 427253 - 427234 - g 93 -7.8 -5.47821 | opp_overlap 427233 427234, overlap 427224 AGGGACGCAAAAAAA CCCTCACA GCTA TGTGGGGG CTTTAGCGCGTCTTG jhp0401 427088 - 428338 + | hypothetical protein jhp0402 429448 - 428582 - | hypothetical protein TERM 392 428614 - 428632 + g 70 -2.5 -5.0538 | overlap 428615 AATCAGGTCTTTGGG GTTTTTT AGGGA AAAAAGC TTTTTTAAACTCAGG jhp0403 430565 - 429669 - | response regulator TERM 393 430621 - 430606 - R 77 -9 -3.28791 | AGTTTTTGTTTATAA CGCATG CTCA CATGCG CTTGGACTAACAGCC ispDF 431816 - 430587 - | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein TERM 394 431682 - 431665 - G 70 -3.3 -4.91511 | ATCGCACGAGAAAAA CGCTTAG ACTC CCCAGCG GCCAATAAAACAACG htrA 433268 - 431838 - | protease DO TERM 395 432139 - 432149 + g 82 -4 -5.4756 | ACACCGTTTTGAGCA GAAA TGG TTTC TTTTTTGTTAGGGTT jhp0406 434740 - 433313 - | amino acid permease TERM 396 434111 - 434092 - G 70 -3.6 -5.00138 | gap 1, overlap 434095 434097 CAGTGAAAGCAAAAA TAACAGCGA GCA TCGC-GCTA AAAACCGCCTCGCTC TERM 397 434287 - 434273 - G 78 -4.2 -5.28942 | overlap 434274 CAGGCTAAAGAAAAA CTCGCC CTC GGCAAA AATTTTAACCGAAAA pgsA 435538 - 434936 - | phosphatidylglycerophosphate synthase jhp0408 436080 - 435472 - | hypothetical protein jhp0409 436878 - 436090 - | 7-alpha-hydroxysteroid dehydrogenase TERM 398 436184 - 436169 - G 78 -4 -5.26316 | gap 1, overlap 436172 TCATCGCATAAAAAA TAAGCCG CCC CGGC-TA GATCGTTAGGATTGC TERM 399 436182 - 436172 - G 84 -8.2 -4.72201 | overlap 436169 TCGCATAAAAAATAA GCCG CCC CGGC TAGATCGTTAGGATT dapA 437777 - 436875 - | dihydrodipicolinate synthase jhp0411 439122 - 437791 - | putative zinc protease pyrD 440174 - 439119 - | dihydroorotate dehydrogenase 2 ppk 442240 - 440213 - | polyphosphate kinase TERM 400 442499 - 442518 + r 79 -5 -5.1848 | opp_overlap 442499, overlap 442489 TTAACCCTAAAAGAT CGCTTAAA ATTT TTTCAGCG TTTTTTGGGTTGATT TERM 401 442714 - 442745 + r 100 -13.8 -3.02096 | opp_overlap 442714 442713, overlap 442707 CCATTATACTAAAAT TTTGGCTCTGGCGC AAGA GCGCTAGGGTCAAA TCTATGGTTACTAGC hsdS_1a 444117 - 442888 - | type I restriction enzyme specificity subunit TERM 402 443273 - 443287 + g 85 -5.8 -5.21709 | opp_overlap 443262 ATAATATCATATTGA TAACAA ATC TTGTTA TTTTTTGATATAGGA hsdM_1 445741 - 444110 - | Type I restriction enzyme modification subunit TERM 403 447202 - 447214 + r 75 -4.9 -5.05153 | TTAATGTATTTTTCA TGATT AAA AATCA TTTCTTTTTTAACCT TERM 404 447883 - 447895 + r 71 -9.1 -2.56095 | overlap 447882 AAATGGTAGGTTAAG GCGGT TTT ACCGC TGCCTTGCGTGTGCC jhp0417 450819 - 448924 - | hypothetical protein TERM 405 449898 - 449914 + g 74 -3.7 -5.07652 | opp_overlap 449898, overlap 449891 449893 TTCCGCATGAAAAAA TGATGAA TTT TTCTTCA TTTTCTTTTAAAAAA TERM 406 449914 - 449898 - G 74 -3.7 -5.14563 | opp_overlap 449891 449898 449893 TTCCGCATGAAAAAA TGATGAA TTT TTCTTCA TTTTCTTTTAAAAAA jhp0418 451611 - 450844 - | hypothetical protein jhp0419 451968 - 451621 - | hypothetical protein TERM 407 451693 - 451710 + gr 70 -3.3 -4.99056 | TTTTTTGGCTTGATA GAGGCGC ATTT GCTCTTC TTTTTGCTTGTCTTG jhp0420 453424 - 451937 - | hypothetical protein TERM 408 452175 - 452195 + gr 77 -9.1 -3.23274 | overlap 452179 CGTAAATGCGCGCAC TGGAGTAAG CCG CTTACTTCA TTGACTTCTAAAAGG TERM 409 452424 - 452442 + gr 75 -8.2 -3.6445 | TATTTTTTTAATTTT TCATTGAC AGA GTCGATGA TTTCAGGGTTGTTGT TERM 410 452525 - 452512 - GR 70 -3.1 -5.00616 | gap 1, opp_overlap 452512, overlap 452515 452521 452522 CTTCTTCGCAAAAAA TGAGCG AAA CGC-CA TTGGCTTTAGCCAAA jhp0421 453924 - 453436 - | hypothetical protein pepF 455645 - 453909 - | oligopeptidase TERM 411 454682 - 454696 + g 85 -8.6 -4.42788 | CCCAGCCTTCTTTGA TCGCTT TAG AAGCGA TTTTATGAAATTCAG kefB 456993 - 455743 - | glutathione-regulated potassium-efflux system protein TERM 412 456434 - 456420 - G 70 -3.6 -4.91084 | CAGGCAATAATAAAA GAATTA AAA TAATCC CCGCTGAAATAAGGG TERM 413 456674 - 456660 - G 76 -3.5 -5.23016 | AAACAAGGGAAAAAA TGGGC GAAAG ACCCA GAACAAAATACCCCA TERM 414 456710 - 456698 - G 79 -3.3 -5.46657 | TACCCCAATAAAAAA GCGAT TAA AGCGC ATAAAACAACCTGTA jhp0424 457872 - 457312 - | putative Outer membrane protein TERM 415 458105 - 458117 + G 73 -7.7 -3.8646 | opp_overlap 458105, overlap 458111 GAGTTCTATGAAAAA CGCTT TCA AAGCG TTTGCCTTGTTAATC TERM 416 458117 - 458105 - g 84 -7.7 -4.72986 | opp_overlap 458105 458111 GAGTTCTATGAAAAA CGCTT TCA AAGCG TTTGCCTTGTTAATC TERM 417 458642 - 458621 - g 72 -4.4 -4.72986 | opp_overlap 458621 CATCGCCACCAAAAA CGCTCAAA TAGGCT TTGGAGCG TTATCTTTGATCGAT modA 458097 - 458837 + | molybdate ABC transporter periplasmic-binding protein TERM 418 458929 - 458940 + G 89 -5.8 -5.46629 | CCACCCTTATTTTAC TCCC TATA GGGA TTTTTTTAGGCTATT TERM 419 459026 - 459041 + G 74 -4.6 -4.88288 | GCCTTTAGTTTTACC CCCAAG CGTG CTAGGG TTTTATCTTCTTTTA modB 458859 - 459533 + | molybdate ABC transporter permease TERM 420 459759 - 459745 - g 79 -3.6 -5.51402 | AGACACTCAAAAAAA GATTTT TTT AAAACC ACAACAGCGAAAAAT modC 459530 - 460327 + | molybdate ABC transporter ATP-binding protein gltX 461835 - 460444 - | glutamyl-tRNA synthetase jhp0429 461953 - 463068 + | putative Outer membrane protein TERM 421 463783 - 463793 + GF 73 -2.4 -5.24531 | opp_overlap 463783 ATCAAAGCCTAGACA GTGC GTC GCTC TTTTTTATGGCGAGT jhp0430 463077 - 464714 + | type II DNA modification (methyltransferase jhp0431 464680 - 465528 + | hypothetical protein jhp0432 465574 - 467373 + | hypothetical protein TERM 422 467561 - 467573 + G 70 -5.5 -4.42386 | CTAATGGTGTGCGTA GGGTT ATT AGCCC TTTTATAGGTGGGGG jhp0433 467389 - 468318 + | putative type II DNA modification enzyme (methyltransferase) TERM 423 468797 - 468785 - g 71 -6.3 -4.18983 | TTATAGAAACAATAA CAATG ACG CATTG CCCGAATGGAATGCA jhp0434 468321 - 468848 + | hypothetical protein TERM 424 468911 - 468895 - f 71 -2.9 -5.186 | CAAAACAGAGAAAAA GCCGTTC ATA GAAAAGC GATTGACAAACCTAG jhp0435 469030 - 470085 + | type II DNA modification (methyltransferase TERM 425 470481 - 470463 - g 82 -6 -4.85782 | opp_overlap 470460 GCGCGCAAAAAGAAA CCATCAAA TTT TTTGGTGG TGATAATTTTGAGAG jhp0436 470276 - 470830 + | hypothetical protein jhp0437 472013 - 471069 - | hypothetical protein jhp0438 472290 - 473876 + | Outer membrane protein TERM 426 474762 - 474776 + G 81 -7.1 -4.59773 | TTGTAGGCACTTTCG TGGGG TTTTT CCCCA TTTTTGCCACTCCGG jhp0439 473948 - 475345 + | putative Outer membrane protein TERM 427 478075 - 478059 - g 89 -9.5 -4.17109 | AACAATGAAATCAAA GCGTTAT TAA ATAACGC AAAAATCCCTACAAG jhp0440 475860 - 478598 + | hypothetical protein TERM 428 478657 - 478643 - f 77 -4.3 -5.17054 | ACAATACTTAAAAAA CTTGA AAAAG TCAAG GATTAAAAAATGAAT TERM 429 478780 - 478762 - g 81 -7.4 -4.59117 | opp_overlap 478761 478762 AAAGCAATTACAAAA CGCCTTAC ATA GTAACGCG CTTTTTACCGAGCAA jhp0441 478667 - 479212 + | hypothetical protein TERM 430 479360 - 479388 + T 74 -5.5 -4.79955 | overlap 479362 CCCTTTACTATTGAT TGTAAAAAATGTT TTT AGCATTTTTTAGA TTTTATTATCCATAT jhp0442 480588 - 479452 - | putative potassium channel protein TERM 431 480277 - 480267 - G 70 -5.4 -4.42238 | CCACGCTAACTAAAA TAGC CAC GCTA AAAGCAATAATTCCC rpmB 480963 - 480775 - | 50S ribosomal protein L28 TERM 432 480877 - 480889 + g 91 -7.7 -5.29445 | TCGCAAGTTAGGGAG CAAGC GAC GCTTG TTTTTGTTGTTCGCA jhp0444 481911 - 481063 - | putative paralog of HpaA TERM 433 482183 - 482172 - g 75 -5.8 -4.66833 | opp_overlap 482171 GGCCAAGGCTAAAAA GGCT AACC AGCC CATTTCTAGCTTCGT mraY 482029 - 483090 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 434 483520 - 483538 + G 74 -4.4 -4.94058 | opp_overlap 483510 ACGATCGCCCTTGTG GGTGCTAG AAA CAAGCTCC TTTTCTTTGCATTAC TERM 435 483799 - 483820 + G 70 -3 -5.06414 | gap 1, opp_overlap 483818, overlap 483799 AAAAATCCCTTCTAA CGC-CCTTT TTTTT AAGGGAGCG TTTTTATTAGACGCG TERM 436 484101 - 484085 - g 77 -8.7 -3.83026 | opp_overlap 484084 484085 GGGGGCGATATTAAA GGGGTCA ATT TAACCCC CCTTTTTGAAGAGTT murD 483092 - 484360 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase jhp0447 484617 - 484357 - | hypothetical protein jhp0448 485008 - 484607 - | hypothetical protein TERM 437 484863 - 484845 - G 86 -7.4 -5.02074 | GCAGGGGTGAAAAAA TCCGCTTT GAT AGAGCGGA TGACAAACACGCCTT TERM 438 485881 - 485891 + G 76 -3.2 -5.23292 | AGTGTTCACTTATTC CTTG GGG CAGG TTTTCTTTTCTCTAA jhp0449 485240 - 486568 + | putative transporter TERM 439 487472 - 487484 + G 79 -3.3 -5.38054 | GGGAATCAGTGGGCA GATCG TTT CGCTC TTTTTCTTTATGGCG jhp0450 486579 - 487907 + | putative transporter TERM 440 488562 - 488531 - g 82 -8.8 -4.20367 | opp_overlap 488531 488550, overlap 488548 CCTTTTAATAAAGAA GGTAATCCTGAAAA CCAG TTTCCAGGACAACC TGTAATCGTTAAAGA pldA 487922 - 488989 + | putative phospholipase A1 TERM 441 489183 - 489169 - g 77 -5 -4.9448 | AGTCATTAAAGAAAA GCTCTT TTT AAAAGC CAGCGATTCAGATAT dnaN 489047 - 490171 + | DNA polymerase III subunit beta TERM 442 491377 - 491363 - g 75 -2.8 -5.32944 | CTTACAAGGAAAAAA GACAAT TTG AGTGTC GGCACTTTGCCTGGA gyrB 490184 - 492505 + | DNA gyrase subunit B jhp0454 492512 - 493543 + | hypothetical protein jhp0455 493530 - 494285 + | hypothetical protein TERM 443 495040 - 495030 - g 75 -5.4 -4.66163 | opp_overlap 495030 ACGCCTAGTGAAAAA CGAT AAA ATCG CTATCGTTTATACAA TERM 444 495649 - 495634 - g 75 -5.4 -4.82901 | overlap 495616 GTTTTTTTAGAAAAA GCTCAG TATT CTAAGC AAAAATTAGAAGAAC jhp0456 494500 - 495720 + | putative Outer membrane protein jhp0457 495720 - 496358 + | hypothetical protein jhp0458 496369 - 497721 + | hypothetical protein TERM 445 498179 - 498169 - g 71 -6.8 -4.08692 | GAATGTCGCTGAAAA TGCC GGT GGCA TGCGCGCGGCTAAAT TERM 446 498338 - 498354 + G 70 -8.1 -3.66666 | GAGGGGTGTTTGGGC GTGATTT CTG AAATCAC TTTAAAGCTTTTAGC glcD 497726 - 499105 + | putative glycolate oxidase TERM 447 499598 - 499584 - g 72 -3.4 -5.11033 | opp_overlap 499588, overlap 499586 CACAATCTCAAAAAA GACGCC CCG AGCGGC ACGGCGTTGAGTTTG dapB 499128 - 499892 + | dihydrodipicolinate reductase TERM 448 499943 - 499968 + T 78 -6.9 -4.44819 | TTATAATGGAATACC GCCCTTTGTTA GCCT TATTAAAGGGC TTTTACTATATTATA TERM 449 500329 - 500317 - T 80 -6.3 -4.75518 | GATATAAAATGAAAA CCATT AGA AATGG CGTGGTAGATTGGCG TERM 450 500711 - 500726 + T 77 -7.6 -4.09739 | GGTTTTCACTTTGTG TCCCTA TAAT TAGGGA TTTTACAGAGCTTGA TERM 451 500752 - 500736 - T 71 -8.7 -2.89881 | opp_overlap 500738 TAGGGATTTTACAGA GCTTGAG CGT CCCAAGC GCGTTCGATTTCTCG glnA 502675 - 501230 - | glutamine synthetase TERM 452 501408 - 501424 + g 76 -4.4 -5.06585 | CTCCTTAAAGTGTGG GGCATT TGTTT GATGCC TTTTTCTCTGATTTC TERM 453 501859 - 501871 + g 71 -6.2 -4.13945 | TCCCACTCCCATTAT CCCC ATATA GGGG TTTTGGCATGAAAGT TERM 454 503252 - 503234 - g 76 -3.1 -5.35224 | TTGATAAAAACAAAA GAAAGCC GAGTG AGCCTTC GGTAAAAATAATGGA TERM 455 504125 - 504115 - g 71 -4 -4.89393 | GAAAGGTTAGAAAAA TTTG ACA CAAA CGAGCCGGTCGATAC TERM 456 504869 - 504859 - g 70 -3.2 -5.0065 | GAGCTAGAAACAAAA GAGA ATA TCCC TTATTGTTTGGGGTT jhp0462 502813 - 504933 + | hypothetical protein TERM 457 505183 - 505170 - g 76 -6.7 -4.45259 | AAAGCGGAAAAAGAA GCCTT AGAA AAGGC GCAAAAATTGCAAAT rplI 504996 - 505445 + | 50S ribosomal protein L9 hslV 505449 - 505991 + | ATP-dependent protease peptidase subunit TERM 458 506645 - 506631 - g 93 -5.8 -5.59564 | overlap 506617 ATAAAGTCAAAAAAA CTTTAA GCG TTAAAG AGGCTAAAGAAGCCC hslU 505991 - 507322 + | ATP-dependent protease ATP-binding subunit TERM 459 508011 - 507991 - g 79 -8.3 -4.06864 | opp_overlap 507988 TTTATAGAAGAAGAA CGCATAGAC AAG GTGTATGCG CGCATTATCGTAGAA era 507322 - 508227 + | GTP-binding protein Era jhp0467 508224 - 509216 + | hypothetical protein jhp0468 510155 - 509304 - | hypothetical protein TERM 460 509687 - 509673 - G 74 -6.4 -4.4648 | ACTTTTATTAGAAAA CATGCG AAC CACATG CCTGTAAGTCTTGAG TERM 461 509807 - 509822 + g 75 -2.5 -5.31275 | CTTTGATAGCGTTTT GTGCA TAGAAT TGCGC TTTTTTGTAATCCAC orf6 510500 - 510847 + | putative cag island protein TERM 462 511396 - 511384 - g 78 -2.7 -5.46698 | TTGAAAAGCAAAAAA TCAAA CAC CTTGA GCGTTTCATTTTGGC orf7 510990 - 511649 + | cag island protein TERM 463 511785 - 511771 - g 78 -7.1 -4.33803 | overlap 511781 AAAGAGACCAAGAAA GAGGC TAAAC GCCTC AAAAAAGAAGCTAAA TERM 464 512644 - 512632 - g 77 -4.9 -4.86613 | overlap 512638 GAAAATCAAAAGAAA CTAAA AGC TTTAG AAGCAGAGTTGAAAA TERM 465 512648 - 512638 - g 75 -5.4 -4.76478 | overlap 512632 CAAAAGAAACTAAAA GCTT TAG AAGC AGAGTTGAAAAAGAA TERM 466 512683 - 512667 - g 81 -2.9 -5.61881 | overlap 512669 GTTGAAAAAGAAAAA CACTAAG AAA CCTAGAG TAGTGGAAGTGCCTA orf8 511642 - 513087 + | cag island protein orf9 513097 - 513606 + | cag island protein virD4 516334 - 514088 - | cag island protein, DNA transfer protein virB11_1 517335 - 516343 - | cag island protein, DNA transfer protein TERM 467 516727 - 516737 + g 73 -5.4 -4.56978 | TTCGGTGTCTTCAAT GGAT ATG ATCC TTTCTTCTTTAGGGA TERM 468 517284 - 517299 + g 87 -4.8 -5.5208 | CTTCTTTTAAGGCTC TTTCTA CTTC TAGAAA TTTTTTATCTTCTGC orf12 517939 - 517340 - | cag island protein orf13/14 523533 - 518074 - | cag island protein TERM 469 519238 - 519221 - G 79 -8.5 -4.12188 | overlap 519236 CCACCATTTTTAAAA TCCATTG GTAA CAATGGA TAACCTTTAGCCGCC TERM 470 519970 - 519987 + g 70 -3.4 -4.96028 | CTTTCTCGCTTCAGG TGTGAG CAATTT CTCGCA TTCTTTTTTTTCAGC TERM 471 521620 - 521637 + g 70 -3.4 -4.96028 | TTTTTTCGCTTCAGG TGTGAG CAATTT CTCGCA TTCTTTTTTTTCAGC orf15 525116 - 523548 - | cag island protein orf16 526776 - 525169 - | cag island protein TERM 472 526345 - 526360 + g 82 -4 -5.38958 | GTCTAGTACGCTATC CATGGA TACA TCTATG TTTTTATTTATCAAT orf17 527539 - 526781 - | cag island protein TERM 473 527692 - 527678 - H 72 -2.8 -5.45652 | ACCTTTAACAAAAAA CCTTTT TGG ATAAGG CGTTGAGCAAAGATT orf18 527921 - 528577 + | cag island protein cagT 528613 - 529455 + | cag island protein TERM 474 529514 - 529503 - T 74 -7.2 -4.13246 | opp_overlap 529503 529504, overlap 529504 TAGGGTAGAGAGAAA CGCC AACG GGCG TTAGCTTTACTTGAT cagS 530259 - 529660 - | cag island protein TERM 475 530572 - 530558 - R 86 -7.2 -4.80487 | opp_overlap 530558 530557 530560 530570, overlap 530570 TACAACTAAAATAAA GAGTTA AGA TAACTC ATTTTCAAAAAGGAG TERM 476 530677 - 530661 - R 73 -8.1 -3.53343 | opp_overlap 530661 AAGCTCTGCGTGAAA GATGAAA AAA TTTCATC TTTAGATAGTTAATA TERM 477 530661 - 530677 + r 75 -8.1 -3.72241 | opp_overlap 530661 AAGCTCTGCGTGAAA GATGAAA AAA TTTCATC TTTAGATAGTTAATA cagQ 531078 - 530698 - | cag island protein cagP 531849 - 531505 - | cag island protein cagM 532464 - 533594 + | cag island protein TERM 478 533903 - 533887 - g 78 -3 -5.40474 | AGCGTTTGAAAAAAA GAACAA CTCTT CTGTTC AAAAAAAAGCGGCTA cagN 533609 - 534529 + | cag island protein cagL 535324 - 534611 - | cag island protein cagI 536466 - 535321 - | cag island protein TERM 479 535948 - 535960 + g 81 -5.5 -5.06103 | TTTTAGGGTAACGCT CGGCT CAA AGCTG TTTTTTAACGCTTCT cagH 537589 - 536477 - | cag island protein cagG 538034 - 537606 - | cag island protein cagF 538895 - 538089 - | cag island protein cagE 541848 - 538897 - | DNA transfer protein TERM 480 539066 - 539051 - G 88 -9 -4.54727 | CCTCTCAAATTAAAA CTAGCG ATAA CGCTAG GGCTTCCATCCTGTT TERM 481 539342 - 539321 - G 78 -7.3 -4.37092 | ATGTCTCTCACAAAA TAAGCGACC TTTG GATCGCCTA AATATTTCCACGCTT TERM 482 539442 - 539432 - G 73 -2.4 -5.3167 | opp_overlap 539432 TAAAAACAAATAAAA GGCG AAA CGTC ATTATTGTCTAAGAA TERM 483 539859 - 539849 - G 70 -5.4 -4.4078 | opp_overlap 539849 GCTGCCCAAGCAAAA GGAT TTA ATCC TGTATCTGTCCCTAG TERM 484 541685 - 541673 - G 87 -6.3 -5.18297 | GAAGAATAAATAAAA GTTTC AGG GAAAC CAAACAACCTATTCC cagD 542483 - 541857 - | cag island protein TERM 485 542327 - 542343 + g 93 -2.1 -6.23317 | opp_overlap 542330, overlap 542330 CTAAATTCGTATAAA CAAGCCC ATT GGGAGTG TTTTTTTCTTTTTCT cagC 542832 - 542485 - | cag island protein TERM 486 542893 - 542882 - H 86 -3 -6.19443 | opp_overlap 542882 TATATCAAAAAAAAA GTAT TTTT ATAC TATTCATACAAGCGC TERM 487 543365 - 543392 + H 95 -8.7 -5.2204 | overlap 543385 TTCTTATTTCTTTAT CTTGTTAAAAT TTGTCT ATTTTAACAAG TTTTTGTTAATTATG TERM 488 546101 - 546091 - g 82 -4 -5.48303 | ACAAGCTCAAAAAAA TGAA GAT TTCA ATACTGGAAAAAATT TERM 489 546349 - 546333 - g 86 -7.3 -5.10154 | AGGTAAAAGCAAAAA TTGACCG ACT CGATCAA ATAGCAAGTGGTTTG cagA 543605 - 547108 + | cag island protein, cytotoxicity associated immunodominant antigen TERM 490 547164 - 547138 - T 100 -9.4 -4.92239 | opp_overlap 547141, overlap 547139 547141 547158 TCAAAAACGCAAAAA CCACCCCTTGCT AAA AGCAAGGGGTTT TTTAACTTAAAATAT TERM 491 547163 - 547139 - T 100 -12.9 -3.53717 | opp_overlap 547141, overlap 547138 547141 547158 CAAAAACGCAAAAAC CACCCCTTGCT AAA AGCAAGGGGTT TTTTAACTTAAAATA TERM 492 547141 - 547161 + T 100 -15.5 -5.15969 | opp_overlap 547139 547138 547141 547158 AAAACGCAAAAACCA CCCCTTGCT AAA AGCAAGGGG TTTTTTAACTTAAAA TERM 493 547161 - 547141 - T 100 -15.5 -3.31103 | opp_overlap 547141, overlap 547139 547138 547158 AAAACGCAAAAACCA CCCCTTGCT AAA AGCAAGGGG TTTTTTAACTTAAAA murI 548694 - 547927 - | glutamate racemase rho 550050 - 548734 - | transcription termination factor Rho TERM 494 550172 - 550159 - H 75 -8.1 -3.69976 | AAAAGATGCTAATAA GTGGC ACAT GCCAC AAGCGTTGAATTTCG TERM 495 550198 - 550211 + H 77 -3.9 -5.40474 | overlap 550188 TTTCGTAATGCTTCG TTATG CTAT CATAA TTTTTTTAACAAAGT rpmE 550315 - 550518 + | 50S ribosomal protein L31 jhp0499 550542 - 551411 + | hypothetical protein TERM 496 551549 - 551526 - g 74 -4 -5.1634 | AGAAATAGACAAAAA GCTTTTTT TCGCGCTC AAAAAAGC ATGCCCAAATATCAT jhp0500 551425 - 552108 + | hypothetical protein TERM 497 552654 - 552636 - g 73 -10.4 -2.81922 | overlap 552635 552633 TATCATTCAAAACAG CTCTTCTT TAA AAGAAGAG AGAGAGCAAGAACGC TERM 498 552905 - 552879 - g 100 -6.8 -6.00086 | opp_overlap 552880 552881 552894, overlap 552870 AGATGAGAAAAAAAA CTCTTTTCAAAA GGT TTTTAAAAAAAG TTATCCTTTAGAGGC jhp0501 552121 - 553086 + | hypothetical protein jhp0502 553083 - 553904 + | hypothetical protein TERM 499 553901 - 553925 + T 74 -8.7 -3.36785 | opp_overlap 553908, overlap 553906 TTTTGATGCGATGCC TTAAGTAGGGG TAA CCCTTATTTAA TTGATTGGAATATGA jhp0503 554412 - 553975 - | hypothetical protein TERM 500 554124 - 554108 - G 72 -3.6 -5.16969 | overlap 554109 CATACAAAAAATAAA TGCGCT GGTAA AGCGCC AAGCAATAGTGAAAC accA 555832 - 554894 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 501 555204 - 555193 - G 72 -4.4 -4.69622 | ATATAACGCTAAAAA TGGA ATAT TCCA TCATAGCCAACTTGT fabB 557092 - 555854 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 502 556270 - 556245 - G 71 -6.7 -4.08767 | gap 1, opp_overlap 556240 556245 556252 TTCATGGCTCTAAAA GCCCCTTCACCC TCA GGG-GCTGGGGC TGTGATGTGGTTAGC TERM 503 557136 - 557151 + r 76 -6.2 -4.65895 | opp_overlap 557125 557135 TCAATAAAACTAGAT TTTAGC TTAA GCTAAA TTTTTGACTAAAACC acpP 557431 - 557195 - | acyl carrier protein TERM 504 557479 - 557464 - R 70 -6.2 -4.32046 | opp_overlap 557463 TTTGTAAAAATTAAA TCCAAT CATC ATTGGA GCGTTTATTTTTGCT jhp0507 557564 - 557484 - | hypothetical protein fabG 558405 - 557662 - | 3-ketoacyl-(acyl-carrier-protein) reductase rpsU 558656 - 558444 - | 30S ribosomal protein S21 jhp0510 560007 - 558757 - | hypothetical protein TERM 505 559376 - 559341 - G 71 -6.5 -4.18494 | CAGCCCCATTTAAAA GGTA-TTTGTCTTCGTT ATGA AAC-AAGACAAAATACC CTCCAATACCCAATA TERM 506 559590 - 559575 - G 72 -4.6 -4.6971 | GAAATTGCAATAAAA CCCACC TAGC GTTGGG ATCTATAAACCAATA TERM 507 559633 - 559645 + g 74 -4.8 -4.72272 | opp_overlap 559633 559644 AATATTCAAACCATA CCTC CCTAA GAGG TTTTTCCTAGGGAAA TERM 508 559820 - 559810 - G 70 -5.4 -4.37092 | ACCTCTTGTATAAAA TTGG ATC CCAA AATTTGGAGTCAAAC jhp0511 560181 - 560426 + | hypothetical protein TERM 509 560416 - 560432 + T 89 -10.9 -3.6707 | ATTGTGATTCTTCTA GTAGGCT TTA AGCCTAC TTTAAGGTATTCGCT jhp0512 561097 - 560450 - | hypothetical protein dapF 562031 - 561210 - | diaminopimelate epimerase TERM 510 563035 - 563049 + G 76 -3.6 -5.23292 | opp_overlap 563035, overlap 563030 AAACCACCCTTAAAA TCAATG AAA TATTGA TTTTCTTTTCTATGA jhp0514 562146 - 563195 + | hypothetical protein jhp0515 564668 - 563901 - | hypothetical protein TERM 511 564190 - 564211 + g 76 -2.3 -5.40072 | opp_overlap 564190 TTCGGCCATTTAAAG GTCTTTTGG ATAT TCAAAAAAC TTTTTTTAAACAAAC jhp0516 565912 - 564812 - | translation-associated GTPase TERM 512 565392 - 565433 + g 72 -4.7 -4.69464 | gap 1, opp_overlap 565401, overlap 565401 565425 TTCGCCGGCTTCAAT TCTTCTA-AATGCGTTTTTA AAC TCAAAGCGCATTCTAAAAGA TTTTTAGCGTCTTTT pepA 567404 - 565914 - | leucyl aminopeptidase TERM 513 566723 - 566743 + g 76 -3.2 -5.31091 | CGAGAGAGGCTTTAT TGACCGCT AAAAA GGCGTTCA TTTTCTTTTCTTCTA TERM 514 567094 - 567072 - G 80 -7.8 -4.44355 | overlap 567069 CAAGCCCAAAAACAA CGCTTTCAAA TTC TCTAAAAGCG CGTTATCTTTAGCAT jhp0518 568030 - 567452 - | hypothetical protein apt 568584 - 568045 - | adenine phosphoribosyltransferase jhp0520 568977 - 568645 - | hypothetical protein rpi 569483 - 569028 - | ribose-5-phosphate isomerase B jhp0522 570200 - 569502 - | hypothetical protein lepB 571081 - 570209 - | signal peptidase I TERM 515 570282 - 570268 - G 70 -8.6 -3.35522 | overlap 570266 CAACGCTTTTAAACA TGCGTT CCC AACGCA CCAGATAGCGTTTTT folD 571953 - 571081 - | methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase jhp0525 574075 - 572039 - | hypothetical protein TERM 516 572610 - 572625 + g 75 -2.6 -5.24129 | gap 1 GATTTGGGTGTTTTT TCC-ACA AAT TGTTGGA TTTTTTCTAAAGGCA TERM 517 573074 - 573091 + g 74 -4.1 -5.0133 | opp_overlap 573076, overlap 573076 TTCAATAAAAGCAGA AAGCATG TAGG CATGCTC TTTTTTAACCAAATC TERM 518 573076 - 573089 + g 71 -6.7 -4.13561 | opp_overlap 573076, overlap 573074 CAATAAAAGCAGAAA GCATG TAGG CATGC TCTTTTTTAACCAAA TERM 519 573089 - 573076 - G 73 -6.7 -4.2649 | opp_overlap 573076 573074 CAATAAAAGCAGAAA GCATG TAGG CATGC TCTTTTTTAACCAAA TERM 520 573656 - 573643 - G 86 -4.5 -5.47914 | opp_overlap 573643 AAAAACTAGAAAAAA TAGGG TATT CCCCA CTCATTTTTAAAATC TERM 521 574044 - 574032 - G 75 -2.7 -5.29846 | overlap 574026 574033 AAGGTGAAATAAAAA CCTTT TAA AAAGA GCGAAAAAAGGGCAT jhp0526 574635 - 574084 - | hypothetical protein TERM 522 574425 - 574414 - G 72 -4.4 -4.66987 | overlap 574415 TATATGGCAAGAAAA GCTT GCAT AAGC AAGGATCAAAAGACA jhp0527 575760 - 574642 - | hypothetical protein pyrC_2 576755 - 575736 - | dihydroorotase tonB_1 577713 - 576760 - | putative siderophore-mediated IRON transport protein jhp0530 578578 - 577697 - | hypothetical protein TERM 523 578082 - 578110 + g 80 -4.5 -5.27938 | GCTCGCTCTTTTTCA TCTTGGCTTGCGA GAT TGGCATGCTGAGA TTTTTCTTTCAGGCT fliN 578946 - 578575 - | flagellar motor switch protein nth 579672 - 579028 - | endonuclease III jhp0533 579905 - 579669 - | hypothetical protein TERM 524 579799 - 579785 - G 70 -5.6 -4.36127 | opp_overlap 579785 579784, overlap 579778 TGGAAGAATGCAAAA GGGTGC ATT GAACCC CTTCATGAATACCAA jhp0534 582838 - 579902 - | hypothetical protein TERM 525 580562 - 580577 + gH 95 -9 -4.98255 | opp_overlap 580561, overlap 580573 CCCATGCACTAAATC CGCCAT GATC ATGGCG TTTTTATAATTGCCA jhp0535 582756 - 583745 + | hypothetical protein oorD 583930 - 584271 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorD oorA 584271 - 585398 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorA oorB 585400 - 586221 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorB TERM 526 586717 - 586695 - g 70 -2.6 -5.03715 | overlap 586708 ACCATGCTTAAAAAA GTCCCTGCAA AAG TCGCTGAAAC GAACAAAAAAGCCTT oorC 586221 - 586775 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorC TERM 527 586790 - 586773 - f 70 -4.1 -5.03145 | opp_overlap 586773 586771 586768 586777 GAAGCTTTGAAAAAA TAAGGGG GTAA CTCCTTA TCTTATTTTTCTTTA TERM 528 587408 - 587398 - g 70 -2.6 -5.093 | overlap 587407 TTTAAAACAAGAAAA TATT ACT AATA CGCAGATATTGCATA TERM 529 587476 - 587449 - g 91 -13.6 -2.62184 | opp_overlap 587446 587445 587472 TTCTTGGGCAGATGA CGCTATGCCTAA AAGT TTAGGCATAGCA ACGCTATTTAGAAAA jhp0540 586889 - 588664 + | hypothetical protein TERM 530 588746 - 588760 + F 85 -2.9 -6.08342 | opp_overlap 588729 588746 ACTCTCTCTCAAAAG TTATC CACTA GATAA TTTTTTTATTTATTA jhp0541 588823 - 588987 + | hypothetical protein TERM 531 589013 - 589024 + G 81 -3 -5.63517 | TGAATAAAGAAACCC GATT TTAT AATC TTTTTTCTTTGGCGG jhp0542 588997 - 590469 + | hypothetical protein jhp0543 590938 - 591516 + | tumor necrosis factor alpha-inducing protein jhp0544 593501 - 591519 - | penicillin-binding protein TERM 532 592267 - 592287 + g 70 -3.3 -4.84274 | gap 1, overlap 592270 TAATTGCTAGGGTGC CATGCGTG GTTTTG CACGC-TG TTTTTACTATAATTG TERM 533 592423 - 592438 + g 83 -3.2 -5.67063 | CGTTTGGCTTGCGTG GCGC GATTGAAA GCGC TTTTTTTATAATCAA TERM 534 592631 - 592606 - G 79 -9.1 -3.92659 | gap 1 TGCCCAAAACGCAAA GACT-CCAACGC TAA GCGTTGGTAATC CAAATCTATCGTGAG TERM 535 592894 - 592882 - G 70 -3.3 -4.84359 | GTAGGGTCATAAAAA CTTGG AGC CCTAG GTAAGGCGACTAACA bioF 594622 - 593501 - | 8-amino-7-oxononanoate synthase TERM 536 593747 - 593720 - G 70 -2.6 -5.0538 | opp_overlap 593722, overlap 593721 593722 CTCTAGGGTAAAAAA TCCTGTAGGCGT TCTA ACGCCTAAAGTT TCAAAAATAATCTGT TERM 537 593745 - 593722 - G 71 -9.6 -2.77166 | opp_overlap 593722, overlap 593721 593720 CTAGGGTAAAAAATC CTGTAGGCGT TCTA ACGCCTAAAG TTTCAAAAATAATCT TERM 538 593722 - 593745 + g 77 -9.6 -3.5627 | opp_overlap 593722 593721 593720 CTAGGGTAAAAAATC CTGTAGGCGT TCTA ACGCCTAAAG TTTCAAAAATAATCT TERM 539 593885 - 593869 - G 77 -8.7 -3.86194 | opp_overlap 593869 AAGCGGTGGTATAAA TCACGCT TTT AGCGCGA TTAGTTAAAAACTCT TERM 540 594488 - 594502 + g 70 -2.8 -5.03314 | overlap 594490 GAGCTTATCAAAAGC GTTTTG AAG CAAATC TTTTTTAACGCTCAA jhp0546 595946 - 594645 - | methyl-accepting chemotaxis protein (MCP) jhp0547 597787 - 596018 - | putative secretion/efflux ABC transporter, ATP-binding protein TERM 541 597905 - 597928 + H 74 -3.8 -5.24129 | overlap 597906 CCGATAATAGTTCCA ACCAAAAGCA AGGA TGCCTTTGGG TTTTTTATAACAAGG TERM 542 597906 - 597927 + H 70 -7.3 -3.73995 | overlap 597905 CGATAATAGTTCCAA CCAAAAGCA AGGA TGCCTTTGG GTTTTTTATAACAAG TERM 543 598647 - 598625 - g 74 -4.2 -5.14163 | AGTGATCAATAAAAA CTCTAACC GAACAGG GGTTAAAG CTTATGCGAGCGTTA TERM 544 598897 - 598885 - g 73 -5.5 -4.56914 | GGATTGAAATCAAAA CCGAC AGC GTCAG TAACGGGCCTAGCGC flaA 597954 - 599486 + | flagellin A TERM 545 599511 - 599531 + F 100 -11.9 -4.40221 | AGGTGTTTGTATGGG GCTAACGCT TTA AGCGTTGGC TTTTCGCTTTAATTT TERM 546 599854 - 599867 + G 70 -5.9 -4.36914 | overlap 599855 AGCTTGCAGAGTGTG TCCGC CCTA GCGGG TTTTATAACCAAAAA jhp0549 599604 - 600260 + | endonuclease III jhp0550 600257 - 600874 + | hypothetical protein TERM 547 601340 - 601323 - g 79 -8.5 -4.12942 | TCAAACGCGCCAAAA GCTTTCT AAAG AGAAAGC GCTAATCGGTTTTTG hemE 600943 - 601962 + | uroporphyrinogen decarboxylase TERM 548 602222 - 602210 - g 75 -2.6 -5.2112 | opp_overlap 602214 602218, overlap 602211 602214 602218 AATACCATGAAAAAA GCGA TAAAG CCGC TTTGGGGCTTTATGA TERM 549 602316 - 602331 + G 89 -9 -4.72386 | opp_overlap 602299 602315 602310 602318 GATGAAGAACCACAC CATCGC CAAA GCGATG TTTTTGCCTACTTTG jhp0552 601972 - 603405 + | hypothetical protein jhp0553 603416 - 604120 + | putative efflux transporter jhp0554 604133 - 607219 + | putative efflux transporter jhp0555 607216 - 607785 + | hypothetical protein TERM 550 608614 - 608603 - g 71 -7.2 -3.90291 | opp_overlap 608603 608602 ATTTTGGCAATCAAA CCCC TAAT GGGG GCTTTAATGTTATGG TERM 551 611555 - 611534 - g 70 -5.9 -4.42653 | ATTTGACCGATAAAA CCACTTACA CGCT TTTAAGTGG GGATAACATCAAATA TERM 552 612003 - 611989 - g 74 -4.2 -5.06816 | AGCGCTCAAGAAAAA GCCAAT AAC AATGGC GGCTCGATCTGGTTT TERM 553 615403 - 615419 + G 74 -3.7 -5.00846 | TATCAGGGCAGGCTT TCTTTTG TAT CTAAAGA TTTTTCTAATATTTC TERM 554 615616 - 615629 + G 73 -6.7 -4.15222 | ACGCTAGAAGTGAGT GCGAA TAAT TTCGC TTTCTTAGGCACCAT jhp0556 607948 - 617532 + | putative vacuolating cytotoxin (VacA) paralog TERM 555 617539 - 617550 + T 88 -7.2 -5.03145 | GCGTTTTAAAAGGTG GGGG CTTA CCCC TTTTTTGAGCCATTA TERM 556 617679 - 617669 - T 74 -5.4 -4.87665 | TTCTAGCTACAAAAA TTGC CAA GCAA AAACAAAACAATGCG jhp0557 618682 - 618350 - | hypothetical protein TERM 557 618617 - 618627 + g 70 -5.4 -4.37198 | overlap 618622 TAACTCGGCTAATTC GGTT AGC AACC TTTTGCGTTTGGCTT TERM 558 618693 - 618705 + r 85 -4.9 -5.55698 | TCCATTATTACTCCT TAAAG TGT CTTTA TTTTTTTACATTCTA ligA 620825 - 618855 - | NAD-dependent DNA ligase LigA TERM 559 619730 - 619746 + g 71 -3.8 -4.83715 | TAATGACGACCACCC TATCAT TGAGC ATGATA TTCTTTTTTTCAATT cheV_2 620896 - 621837 + | putative chemotaxis protein TERM 560 621958 - 621971 + G 80 -4.5 -5.24551 | opp_overlap 621958, overlap 621952 TAACACTTATAGAGA CCATG GAGG CGTGG TTTTTATTGATTTAA TERM 561 623198 - 623185 - g 71 -5.2 -4.5366 | TGAAAAAACCGAAAA CGGC TATCAT GCCG CGCACCACCCCTTTA aspS 621872 - 623611 + | aspartyl-tRNA synthetase adk 623623 - 624198 + | adenylate kinase jhp0562 624223 - 625221 + | putative lipopolysaccharide biosynthesis protein jhp0563 625240 - 626575 + | putative lipopolysaccharide biosynthesis protein ppa 626631 - 627152 + | inorganic pyrophosphatase TERM 562 627149 - 627138 - T 74 -5.8 -4.56887 | GAAAAAGCGATAAAA GCCT ATCA AGGC TAAAGATTTAAGGGG mutS 629589 - 627301 - | recombination and DNA strand exchange inhibitor protein TERM 563 627363 - 627376 + gT 76 -4.5 -5.06103 | opp_overlap 627342, overlap 627361 CGTCGCTAAAGCTCA CCACT TTAG GGTGG TTTTTTAAAAATTCT TERM 564 628104 - 628094 - GT 93 -8.2 -5.26875 | TTTTCAATCAAAAAA GGCG GCA CGCC ATAGCGCAAAGCGGT TERM 565 628279 - 628290 + gT 72 -4.4 -4.83169 | AACGATTTGGTTGTT TTGC TTAA GCAA TTTTTCTAACAGGGT jhp0566 629912 - 629550 - | hypothetical protein TERM 566 629739 - 629724 - GR 73 -5.4 -4.56597 | opp_overlap 629724 629730 TTCCCCCCTTAAAAA CGCTCT TTGC AAAGCG ATTTCTTGTTGGTTT murC 631261 - 629912 - | UDP-N-acetylmuramate--L-alanine ligase TERM 567 630536 - 630550 + g 90 -3.6 -5.93809 | TTTTAAAATGTATTG GATATT ATA AATGTC TTTTTTTTCTAAAAC TERM 568 631214 - 631229 + g 75 -5.4 -4.66163 | ACCGATGAAATGGAT CTTGCA ATCT TGCAGG TTTTTGAGTAAAACT jhp0568 632381 - 631254 - | hypothetical protein TERM 569 631998 - 631988 - G 76 -6.8 -4.33165 | opp_overlap 631993 CTAAAGGCATTAAAA GGCT TTT AGCC CTAGCGAATTGGGCT TERM 570 632113 - 632086 - G 87 -6.4 -5.34857 | TCAAATAAAACAAAA CTAGGGAAAT TGAATAAC ACTTCCCTAG ATCCTAGCGTGGAGA ispG 632534 - 633613 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase dapD 633616 - 634821 + | putative 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase jhp0571 634833 - 635891 + | hypothetical protein TERM 571 635967 - 635980 + F 87 -5.3 -5.53079 | overlap 635964 AAGAGGTTAGCGTTT GCTTT GCGC AAAGC TTTTTTATATCTTTT TERM 572 637532 - 637500 - g 77 -7.7 -4.13945 | opp_overlap 637499 ATTTCTACCCCAAAA CCCCCACCCAA GAATGGCGCGA TAGGGTGGGGG ACTATTTCACTTTTG jhp0572 636104 - 638155 + | hypothetical protein TERM 573 638177 - 638189 + T 80 -7.7 -4.19746 | opp_overlap 638160 638176 CCCCAAAAAATGAGG GGGTT AAA AACCC TTATTTTAAAATCAC jhp0573 638785 - 638201 - | hypothetical protein TERM 574 638685 - 638696 + g 70 -3 -5.1101 | opp_overlap 638685 ACTTCTAGCCCTAAA GATT CTAG AATC TTTTTTGCATGGTGG hyaA 638943 - 640097 + | hydrogenase, small subunit TERM 575 641757 - 641785 + G 75 -8.2 -4.07885 | CATTCTTTTGATCCA TGCATCGCATGC TCAGT GCATGTGATGGA TTTTAAAGGGCAGTC hyaB 640107 - 641843 + | hydrogenase, large subunit TERM 576 642330 - 642346 + G 73 -6.6 -4.26079 | overlap 642344 CATGAGGGGCTTGGG GCGTTT TTAGC AAACGC TTTTAAGTGGTTTGA hyaC 641856 - 642530 + | hydrogenase, cytochrome subunit hyaD 642527 - 643063 + | hydrogenase expression/formation protein TERM 577 643233 - 643259 + G 70 -3.6 -4.97824 | overlap 643235 ATCACTTTAGAGTTT GCGCAAAAACTC AGC GAGATCTTGCCC TTTTCTTTAGATTTT TERM 578 644046 - 644035 - g 73 -5.8 -4.56775 | opp_overlap 644035 ATGGTTCTTTAAAAA CGCT TTTA AGCG TTGGTTTTGATTTCA jhp0578 643065 - 644603 + | hypothetical protein jhp0579 645021 - 644608 - | hypothetical protein TERM 579 644757 - 644767 + g 71 -4 -4.98758 | TGTTTTTAGCGAGTT GTTT ATA AAAC TTTTTATCGCTTTTT jhp0580 645592 - 645140 - | hypothetical protein TERM 580 645271 - 645246 - G 75 -7.7 -3.97307 | gap 1, opp_overlap 645246 GGCATGTAATAATAA GGCATGTAATAG CCT CCAT-ACATGCC GTTTTGCATGGGCGA jhp0581 645773 - 646696 + | putative Outer membrane protein TERM 581 646790 - 646770 - T 75 -4.8 -5.0432 | gap 1, overlap 646772 AACAAAAATATAAAA CAGCTTGAT CTTA ATCAAGC-G ACAAACTCCTAAAAA TERM 582 646789 - 646772 - T 82 -8.5 -4.09378 | overlap 646770 CAAAAATATAAAACA GCTTGAT CTTA ATCAAGC GACAAACTCCTAAAA TERM 583 646911 - 646901 - T 70 -4 -4.98911 | TATTATAAAAACAAA GTTT TAA AAAC CCCATTCTTTAAAAA TERM 584 646944 - 646964 + T 85 -4.8 -5.66684 | gap 1, opp_overlap 646913 646912 TATTTTTTACAGCAT GGC-TTGAA ACTC TTCAAAGCC TTTTTTTCTCAGTTG jhp0582 647612 - 646935 - | hypothetical protein TERM 585 647257 - 647267 + g 79 -5.4 -4.87665 | CCTAAAGCGATGTTG CTAG CCC CTAG TTTTTGTGCGTAAGA pcnB 647674 - 648882 + | polynucleotide adenylyltransferase TERM 586 648889 - 648879 - f 75 -2.6 -5.57054 | AATAAGGCAAAAAAA TTAA AAA TTAA AAATGGAAAAAACAT jhp0584 648903 - 649406 + | hypothetical protein jhp0585 649421 - 650278 + | putative 3-hydroxyacid dehydrogenase jhp0586 650280 - 650933 + | NAD(P)H-flavin oxidoreductase jhp0587 651229 - 650990 - | hypothetical protein TERM 587 652352 - 652365 + G 79 -6.7 -4.61231 | opp_overlap 652352 652350, overlap 652363 TGAAGATTTTAAAGA GCGTT GTTT AACGC TTTTTAACGCTCTAA gltX 651258 - 652577 + | glutamyl-tRNA synthetase jhp0589 652574 - 652867 + | hypothetical protein TERM 588 652972 - 652962 - g 80 -2.4 -5.64274 | opp_overlap 652962 GGATTTAGAAAAAAA GCCC GCC GGGA TCGTTAGGGATTATT TERM 589 653665 - 653630 - g 100 -8.5 -5.60993 | gap 1, opp_overlap 653655 653656 TCTTGCACAAAAAAA CTTCTAAAGCGCTCAA GTATT TTGAACGC-TCAGAAG CGGTTGTCAAGGACG jhp0590 652876 - 654558 + | lytic murein transglycosylase galU 654555 - 655376 + | UTP--glucose-1-phosphate uridylyltransferase jhp0592 655388 - 655795 + | hypothetical protein murA 655798 - 657066 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 590 657081 - 657064 - f 71 -2.1 -5.45802 | gap 1, overlap 657068 CGTTTAAAAGAAAAA TAATCCAA GAT TTGG-TTA CAATAGCTAGAATAT TERM 591 657299 - 657280 - g 85 -7 -5.15969 | GCTCAAGTCAAAAAA GCGGCCGC TTTA GCGAACGC GCAATTAGGCTTGAT aspA 657124 - 658530 + | aspartate ammonia-lyase TERM 592 658563 - 658582 + G 70 -7.8 -3.63744 | overlap 658561 CGCCTTCAAACTTTA CGCTCCCT TTAT ATGGAGCG TCTTTTAGGCGAAAC jhp0595 658536 - 659165 + | hypothetical protein fucT 660538 - 659174 - | alpha (1,3)-fucosyltransferase TERM 593 659561 - 659527 - G 73 -7.4 -4.07568 | opp_overlap 659515 659526, overlap 659528 TGTCGTTTTCTAAAA TCGTTTTAAAAAAATC TAG GATTTTTTTAAAACTC AAATTTTGGTAAAAG TERM 594 659560 - 659528 - G 78 -10.9 -3.04398 | opp_overlap 659515 659526, overlap 659527 GTCGTTTTCTAAAAT CGTTTTAAAAAAATC TAG GATTTTTTTAAAACT CAAATTTTGGTAAAA serB 661199 - 660576 - | phosphoserine phosphatase pfr 661717 - 661214 - | nonheme iron-containing ferritin TERM 595 661977 - 661956 - H 85 -6.7 -5.12474 | overlap 661950 TATAATATATAAAAA GCATTCTTA AATC TAAAAATGC TACAATGTTTATCTT TERM 596 662423 - 662434 + G 74 -4.4 -5.00616 | AAAGGCCATGACTGC TGCA GAAG TGCA TTTTTTAAGCGCCAA jhp0599 662016 - 663098 + | hypothetical protein TERM 597 665630 - 665618 - g 71 -6.2 -4.14392 | opp_overlap 665618 TCTTAACCTTTAAAA CCCC AACTA GGGG GAGTTTCTTCTATAA jhp0600 663181 - 665901 + | protective surface antigen D15 jhp0601 665903 - 666964 + | hypothetical protein jhp0602 666970 - 668277 + | putative processing protease TERM 598 669102 - 669117 + G 72 -3.2 -5.1356 | opp_overlap 669102, overlap 669104 CGCTACTTTAAAGAT CCGGAT TTGT ATCCTG TTTTTATTGATGAGA gatB 668277 - 669701 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 599 670826 - 670813 - g 74 -5.3 -4.67168 | AAAAAGGGGTAAAAA TGAAG TGAG CTTCA GTCAGGCCAAGCAAT jhp0604 669701 - 670942 + | hypothetical protein TERM 600 670975 - 670987 + G 71 -4.9 -4.59081 | CTTCAATTTCCTCTA TAAAG ATT CTTTA TTTTCTATCGCTTTA TERM 601 671088 - 671078 - g 85 -2.6 -5.7827 | overlap 671071 671079 AAGAGAAACAAAAAA TTTT TGC AAAA ATTCGCCCAAAATCA jhp0605 670952 - 671959 + | hypothetical protein rnhA 671961 - 672392 + | ribonuclease H TERM 602 672729 - 672746 + G 71 -7.1 -3.85698 | AAGATTATTTGCGCG TTTCTTC TTCT GAAGAAA TTTCTAAGGGGAGGG TERM 603 673097 - 673083 - g 72 -10 -2.62293 | overlap 673082 AAGCCGAACAGCAAT GCGCTT ATC AAGCGC TTCAAAAACTTAAGG rnc 672404 - 673123 + | ribonuclease III TERM 604 673623 - 673642 + G 77 -6.4 -4.62069 | opp_overlap 673626 AAATTACGATTTTAA TCACGCTT TAAA AAGCGAGA TTTTTGCCCTAGACA aroC 673120 - 674217 + | chorismate synthase TERM 605 674505 - 674493 - g 75 -7.7 -3.98009 | AGAAAACGCCAGAAA GGCTT TTG AAGCC AGGCTTAGGGCGGAA jhp0609 674254 - 674769 + | hypothetical protein TERM 606 675102 - 675119 + G 89 -5.5 -5.40474 | gap 1, overlap 675102 GCGCAATTCCACTAT GG-CGGTG GCA CGCCGACC TTTTTTTCGCCCCCT hemN_1 674769 - 676142 + | coproporphyrinogen III oxidase glpC 676139 - 677440 + | glycerol-3-phosphate dehydrogenase TERM 607 677758 - 677740 - g 74 -6 -4.33281 | overlap 677742 ACTTCAAACAAAGAA TACATCGC CGT GCAATGCA AATTCCATCAAAACA TERM 608 678181 - 678158 - g 77 -6 -4.57837 | overlap 678161 ACACTTCTTTAAAAA TCATGGAATC TTTA GATCCCAAGA TCACGCTTTTTCTAG jhp0612 677518 - 678870 + | hypothetical protein TERM 609 679079 - 679060 - g 70 -3.6 -4.85267 | overlap 679062 ACAAACGAGTAAAAA TATCAAAG ACTC CTTTGAAA CGATCATGGAATGCT TERM 610 679471 - 679441 - g 71 -4.8 -4.59853 | overlap 679443 679447 TGAAGCCGTCAAAAA CACCAATTTCCAAA ACA TTTGGAAAGTGCTA AAAGCTTTAAGAAGC TERM 611 679465 - 679447 - g 74 -9 -3.60925 | overlap 679443 679441 CGTCAAAAACACCAA TTTCCAAA ACA TTTGGAAA GTGCTAAAAGCTTTA TERM 612 681225 - 681200 - g 83 -3.5 -5.53079 | AAAAGAGACAAAAAA TCAAAAATA TTCAATGC TATTTTTGA TCTCAATTCTAATGG TERM 613 681508 - 681494 - g 70 -3.6 -4.85782 | overlap 681495 GGTTTGAAAAACAAA CTCATT AAA AATGAA AATCTGCCAGAAAGC TERM 614 682136 - 682112 - g 79 -3.5 -5.47914 | AAAAAGGATAAAAAA GGGGATCGCAT CAA ATACAACCACC ATATCACTATCACTC jhp0613 678872 - 682375 + | hypothetical protein jhp0614 682624 - 683436 + | putative Outer membrane protein TERM 615 683455 - 683480 + F 100 -12.1 -4.42386 | AAAACGCTTGTTTTT CTCTAATTGAA GTTT TTCAATTAGAG TTTTCTCCATAGACC TERM 616 683504 - 683524 + F 70 -4.1 -5.055 | overlap 683501 ATAGACCACCGCTTT CTTTTGAAA CAT TTTTGAAAG TTTTTTGAAGATTAG TERM 617 684530 - 684518 - g 74 -4.9 -4.66609 | TAGCCCACGCAAAAA TCAAT GCG ATTGA AGGGCTGAACGCTTT aspB 683596 - 684768 + | aspartate aminotransferase TERM 618 685170 - 685183 + G 76 -2.3 -5.4251 | AAATTGTTATTGGAC CTAGC GAAA GCTTG TTTTTTGTATATGAA jhp0616 684935 - 685726 + | hypothetical protein TERM 619 686113 - 686125 + G 89 -9.1 -4.72846 | opp_overlap 686112 686111 AAAAATTACAGAATC GCCCT GTT AGGGC TTTTTAGCTATATAG jhp0617 685741 - 686811 + | integrase-recombinase protein (XERCD family) TERM 620 686871 - 686890 + T 71 -5.2 -4.67353 | opp_overlap 686884 CAACTAAAACCCCAT TTTTTTAA GAAA TTAAAAAA TTTTTAGCTCGCTCA ogt 687381 - 686875 - | methylated-DNA--protein-cysteine methyltransferase TERM 621 687080 - 687098 + g 76 -2.4 -5.46706 | overlap 687081 GGGTTATTAATGAGC TTTGCGAT TTC ATCGTAAC TTTTTGTTTTGCCAT jhp0619 688148 - 687381 - | hypothetical protein TERM 622 688009 - 687995 - G 73 -7.2 -4.06533 | overlap 687980 CAAATGATGAAAGAA CCATTT GTA AAATGG AAATGCCGATGGATT TERM 623 688051 - 688036 - G 73 -6.8 -4.17762 | GATTCTTCAAAAGAA TGCCCG GTTG CGAGCA TGATAGGGACAATGA jhp0620 689220 - 688273 - | putative lipopolysaccharide biosynthesis protein TERM 624 688764 - 688774 + g 72 -3.2 -5.04175 | overlap 688758 GCGTGATGTCAAACA CCTT TTC AGGG TTTTTGTCTAATTCA nrdA 691648 - 689282 - | ribonucleotide-diphosphate reductase subunit alpha TERM 625 689807 - 689819 + g 70 -9.1 -3.23711 | opp_overlap 689806 ATTGGCTTTATCAAT GGGGA AAA TCCCC TTACTCCATTCTGAA TERM 626 691425 - 691408 - G 87 -3.4 -5.75478 | AATCATACAAAAAAA GCCTTG AGGCGA CAAAGC TCCAATTAGGCGTGT TERM 627 691766 - 691779 + r 75 -2.5 -5.60993 | TAATAAGAATGGGTT TTAAA GTTT TTTAA TTTTTTTATACCCCC jhp0622 692326 - 691820 - | hypothetical protein jhp0623 692716 - 692366 - | hypothetical protein glmU 694209 - 692908 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 628 693930 - 693912 - G 88 -8.8 -4.68645 | opp_overlap 693906 CATTCAAAATCAAAA CCCGCTCA TGT TGAGTGGG AATAGGCGTTTTATT TERM 629 694503 - 694521 + G 76 -2.4 -5.42198 | gap 1, overlap 694496 AGTGATGACGAGTTT CACC-CG TTTGAT CGTGGTG TTTTCTTTTTTAAGG fliP 694306 - 695052 + | flagellar biosynthesis protein FliP TERM 630 695089 - 695064 - T 85 -9.2 -4.05583 | opp_overlap 695063 695064, overlap 695062 TTAATATTAAAAACA TTCAAGCTAT AAAAGG ATAGCTTGAA ATTAATTTAAAACTC TERM 631 695064 - 695089 + T 72 -9.2 -2.71001 | opp_overlap 695064 695062, overlap 695063 TTAATATTAAAAACA TTCAAGCTAT AAAAGG ATAGCTTGAA ATTAATTTAAAACTC fecA_1 697399 - 695096 - | iron(III) dicitrate transport protein TERM 632 697589 - 697577 - R 76 -3.5 -5.4659 | opp_overlap 697577 GAATATAAAGAAAAA TAAAA ATT TTTTA ATATTTCTAATGGGG TERM 633 697642 - 697621 - R 95 -10.3 -4.46233 | opp_overlap 697625, overlap 697625 GGAATTTTAAACAAA TAAAGGGTT TTTA AACCCTTTA TGGCTAGGCTTTTTA TERM 634 697638 - 697625 - R 83 -6.7 -4.78326 | opp_overlap 697625, overlap 697621 TTTTAAACAAATAAA GGGTT TTTA AACCC TTTATGGCTAGGCTT feoB 699583 - 697655 - | ferrous IRON transport protein B TERM 635 699321 - 699307 - G 72 -10 -2.73619 | overlap 699306 AATTACGCTCTAAAT TGGTGG AAT CCACCA CATTGAGAATGAGAT TERM 636 699588 - 699608 + H 84 -3.3 -5.85011 | overlap 699589 699603 ATTTCTTTCATTGGG TTTGAATGC TCC GCATTAAAG TTTTTTTAATTTTTG jhp0628 699704 - 700534 + | hypothetical protein jhp0629 700587 - 701801 + | putative type II DNA modification enzyme (methyltransferase) jhp0630 701804 - 702676 + | putative type II restriction enzyme jhp0631 703354 - 702854 - | hypothetical protein jhp0632 705675 - 703378 - | N-methylhydantoinase jhp0633 707825 - 705687 - | putative hydantoin utilization TERM 637 705996 - 705984 - G 74 -9.1 -3.61178 | GCCAGTCACGCTAAA GCCAG CTT CTGGC GAACACGCTGATTCA TERM 638 707267 - 707277 + g 84 -6.8 -4.87786 | CTCTAACGATCCGCT CGCT TTC AGCG TTTTTATGAGATTGC jhp0634 709066 - 708056 - | putative Outer membrane protein atoE 710559 - 709195 - | short-chain fatty acids transporter scoB 711202 - 710579 - | 3-oxoacid CoA-transferase subunit B scoA 711897 - 711199 - | 3-oxoacid CoA-transferase subunit A thl 713083 - 711908 - | acetyl-COA acetyltransferase TERM 639 712370 - 712390 + g 73 -8.3 -3.71649 | overlap 712371 TCCTGCCGTTACCGA TCCGTCTTT TTT AAAGGCGGG TTTGAGCTTTGCAAG TERM 640 712371 - 712389 + g 71 -9.6 -2.82668 | overlap 712370 CCTGCCGTTACCGAT CCGTCTTT TTT AAAGGCGG GTTTGAGCTTTGCAA TERM 641 712834 - 712844 + g 71 -6.8 -4.1347 | CGCAAACCATATTGA CGCT AAA AGCG TTTCTGTCATTAGGG jhp0639 713348 - 714376 + | hypothetical protein TERM 642 714402 - 714426 + G 80 -2.3 -5.55769 | gap 1, opp_overlap 714402 714412 714423, overlap 714402 714423 CCCCCCAAAGCTAAA GGG-TTTAAA CGCCTT TTTAAAGCCC TTTTTTATTCTAAAG TERM 643 714684 - 714712 + G 70 -3.1 -4.86731 | opp_overlap 714674 714673, overlap 714684 GACATGGCCAGCTCG GCCCAACTGATAG GGC TTATTTTTTGGGC TTTTATTTGGGGGCG TERM 644 714725 - 714741 + G 81 -6.6 -4.78077 | GGCTTTTATTTGGGG GCGTTA CCTTT TAACGC TTTATTTTAATTAAA dgkA 714369 - 714755 + | diacylglycerol kinase TERM 645 716400 - 716414 + G 75 -2.8 -5.28176 | opp_overlap 716402, overlap 716402 AGCACTTATGAAGAT GATTTC ATT GAAAAC TTTTTTGTGGCTAAC gyrA 714771 - 717257 + | DNA gyrase subunit A jhp0642 717257 - 717730 + | hypothetical protein TERM 646 718376 - 718357 - g 74 -4.9 -4.72272 | overlap 718338 718359 TTTGGGTATCAAAAA GGGGCGT TCACGG ACGCCAC AGCTCCTAAAATGGG jhp0643 717727 - 718872 + | putative transcriptional regulator uvrA 722370 - 719545 - | excinuclease ABC subunit A TERM 647 720366 - 720376 + g 88 -4 -5.78622 | CAATCTCCACCCCAT TCAA GCT TTGA TTTTTTTTAGCATGG TERM 648 720890 - 720845 - G 80 -10.5 -3.63744 | opp_overlap 720845 720847 720851 720852, overlap 720852 720854 GGCTCGTCTAAAACA TACAAAACCCCTGTCAAACCG CTCC CGATTTGACTGGCGATTCGTA TCCTTTGGCTCTCCC TERM 649 720883 - 720852 - G 93 -9.4 -4.78933 | opp_overlap 720852 720851 720847 720845, overlap 720845 720854 CTAAAACATACAAAA CCCCTGTCAAACCG CTCC CGATTTGACTGGCG ATTCGTATCCTTTGG TERM 650 720881 - 720854 - G 76 -10.6 -2.65813 | opp_overlap 720852 720851 720847 720845, overlap 720852 720845 AAAACATACAAAACC CCTGTCAAACCG CTCC CGATTTGACTGG CGATTCGTATCCTTT TERM 651 721004 - 720973 - G 90 -3.8 -5.94713 | overlap 720975 ATCGTATAAAAAAAA CACCCTTTCTAAAA TCTC TTTTAAAATGGGTT CAGCGATCTTTTTTT TERM 652 721002 - 720975 - G 77 -6.4 -4.62054 | overlap 720973 CGTATAAAAAAAACA CCCTTTCTAAAA TCTC TTTTAAAATGGG TTCAGCGATCTTTTT TERM 653 723161 - 723190 + G 73 -7.3 -4.13767 | gap 1, opp_overlap 723161 TTATAGCACCAACAC TTCAACCGTCGCTT TTC AAGTG-TGGTTGAA TTTTGGGGTGAGAGC hopE 722544 - 723356 + | Outer membrane protein/porin TERM 654 723571 - 723545 - g 70 -3.1 -4.89838 | gap 1, overlap 723546 723547 GCAAGAAATAGAAAA TC-TGCACCAAA GCGT TTTGTTGCAAGA AGTCTTGCAGGCGTT mraW 723528 - 724454 + | S-adenosyl-methyltransferase MraW jhp0647 724475 - 724819 + | hypothetical protein TERM 655 724900 - 724866 - f 90 -9.5 -4.23732 | opp_overlap 724871 724873 724876, overlap 724873 TAAATATAAACTAAA TATAAAAGAGCTTGC GTCAA GCAAGGTCTCTTATA AAGCGCTCTTAGGGG TERM 656 724893 - 724873 - f 74 -5.4 -4.85894 | opp_overlap 724871 724873 724876, overlap 724866 AAACTAAATATAAAA GAGCTTGC GTCAA GCAAGGTC TCTTATAAAGCGCTC jhp0648 725292 - 726194 + | hypothetical protein TERM 657 726506 - 726487 - g 82 -6.4 -4.98857 | opp_overlap 726486, overlap 726481 AGCGAACGAGAAAAA CGGCTTTT TCAT AGAAGCCG GCTTTGAAACTGGGC jhp0649 726428 - 728401 + | putative Outer membrane protein jhp0650 728591 - 729811 + | hypothetical protein TERM 658 730261 - 730246 - g 87 -4.8 -5.42164 | GATAAAGAAGAAAAA CTAAAA GCCA TTTTAG AACAACACATTTTGT jhp0651 729811 - 730515 + | hypothetical protein rpoN 731771 - 730527 - | RNA polymerase factor sigma-54 jhp0653 732496 - 731774 - | ABC transporter ATP-binding protein jhp0654 732910 - 732509 - | hypothetical protein TERM 659 732584 - 732594 + g 78 -2.6 -5.47914 | AATAGCTAAATCGTA TTTT TTT AAAA TTTTTTCTAATTTTT dnaX 734655 - 732907 - | DNA polymerase III subunits gamma and tau TERM 660 733077 - 733098 + g 78 -7.3 -4.35747 | overlap 733072 CGTTTTCTTTCGTTT GAAGCGCTT TTCC AACCGCTTC TTTAGTTTCTTTTTC TERM 661 733640 - 733656 + g 86 -9.5 -4.05629 | overlap 733649 ATCGCATCGTCTAGG GCTTTGA GTT TCAAAGC TTCTTTGAATTTCAT TERM 662 733649 - 733665 + g 77 -8.1 -4.21922 | overlap 733640 TCTAGGGCTTTGAGT TTCAAAG CTT CTTTGAA TTTCATTTTCAATAA TERM 663 734032 - 734046 + g 75 -5.6 -4.83169 | overlap 734034 734038 734042 CCTCAAACTCCCTTG CCCGCT GTG AGCGAG TTTTTCTAACGCGCT jhp0656 735354 - 734722 - | hypothetical protein TERM 664 734778 - 734762 - G 71 -6.5 -4.17132 | AAATCCCTGAATAAA GTAACGC TGA GCGTTCC CATGATAGCGGTTAC jhp0657 735622 - 736044 + | hypothetical protein TERM 665 736317 - 736299 - g 74 -5.2 -4.74132 | opp_overlap 736312 ATACGCGACTAAAAA CACAGACA AAA TGACCGTG GCGGATTTTGAAGCC TERM 666 736480 - 736465 - g 74 -4 -5.07053 | AAGCATGGCAAAAAA CATGAC AAAG ATCATG ACGATAAAGACCATG jhp0658 736072 - 736530 + | hypothetical protein TERM 667 736577 - 736615 + F 75 -9.6 -2.80017 | opp_overlap 736584, overlap 736576 736591 CTTCAAACCCTTTAA GCAGAAATCCTAAACGCT TTG AGCGTTTGGGATAAATGC GTTCTGTTAAGCGTT TERM 668 736608 - 736584 - f 100 -11.5 -4.05446 | opp_overlap 736577 736576 736591 CCCTTTAAGCAGAAA TCCTAAACGCT TTG AGCGTTTGGGA TAAATGCGTTCTGTT jhp0659 736846 - 738760 + | putative Outer membrane protein dcuA 740161 - 738830 - | anaerobic C4-dicarboxylate transporter TERM 669 739199 - 739185 - G 74 -4.2 -5.14563 | opp_overlap 739185 TCTGCGATCAAAAAA GAAGCG TAT CGCTTG ATTTCATCTATATGA TERM 670 739888 - 739866 - G 83 -6.2 -5.03715 | opp_overlap 739870, overlap 739868 AGTATCGTTAAAAAA TACGCCACGC TTG GCGCGAGGTA GTTGATTTGCTTGGG TERM 671 739881 - 739868 - G 77 -8.1 -4.14633 | opp_overlap 739870, overlap 739866 TATCGTTAAAAAATA CGCCA CGCT TGGCG CGAGGTAGTTGATTT ansB 740291 - 741289 + | L-asparaginase II TERM 672 741295 - 741340 + T 79 -4.9 -5.29885 | opp_overlap 741304, overlap 741299 741304 AGAGTATTAAACGAT TCTATTAGATCACCCAATTAT CAAA GTAATTGGGTGATTTGGTTTA TTTTGTTTTTGACTT TERM 673 741299 - 741336 + T 100 -10.1 -5.098 | opp_overlap 741304, overlap 741295 741304 TATTAAACGATTCTA TTAGATCACCCAATTAT CAAA GTAATTGGGTGATTTGG TTTATTTTGTTTTTG TERM 674 741331 - 741304 - T 86 -11.5 -2.80291 | opp_overlap 741304 741299 741295 AACGATTCTATTAGA TCACCCAATTA TCAAAG TAATTGGGTGA TTTGGTTTATTTTGT TERM 675 741304 - 741331 + T 100 -12.2 -4.33487 | opp_overlap 741304, overlap 741299 741295 AACGATTCTATTAGA TCACCCAATTAT CAAA GTAATTGGGTGA TTTGGTTTATTTTGT jhp0662 743381 - 741428 - | putative Outer membrane protein TERM 676 742348 - 742362 + g 71 -6.4 -4.14511 | GGTTAGTAGGCGTTT TACCCG CAT TGGGTA TTTTCAAATAGGCTT jhp0663 744519 - 743602 - | putative Outer membrane protein TERM 677 744148 - 744138 - GR 78 -6.8 -4.36914 | opp_overlap 744138, overlap 744139 TCGCTTGGGATAAAA GGGT GTT ACCC CCCACTTTTTGACCT jhp0664 745475 - 744489 - | putative transcriptional regulator TERM 678 745064 - 745075 + gr 95 -4.4 -5.85737 | AACCTAAACGCACTT TCAC GCTT GTGA TTTTTTTATTGGTGT jhp0665 746585 - 745569 - | hypothetical protein TERM 679 745886 - 745874 - G 70 -3.3 -4.9218 | overlap 745875 745876 TATCCACCATAAAAA GCGCA TTG TGCGA ATGCTTGAAAAAAGT TERM 680 746318 - 746344 + g 73 -5.8 -4.58663 | CATAACGAACTTTTC TCGCTTGCATTT CAA AATTGCGCGCGA TTTTTGGGGCGTAAT jhp0666 747688 - 746621 - | hypothetical protein TERM 681 747146 - 747124 - G 72 -3.4 -5.17054 | overlap 747115 747144 747145 ATAAGAGGTAAAAAA GCCTTTTGCC AAA AACAAAACGC ATGAAATTTTCTTGC TERM 682 747162 - 747144 - G 78 -3.8 -5.26119 | overlap 747124 747145 TTGCCAAAAACAAAA CGCATGAA ATT TTCTTGCA TGGTTAAATATTCGT jhp0667 748002 - 747697 - | hypothetical protein jhp0668 749827 - 748118 - | hypothetical protein TERM 683 748198 - 748209 + g 89 -5.8 -5.4477 | overlap 748207 TTTCCAGTCCTTGAG CGCA CTCT TGCG TTTTTTTAACGCTTT TERM 684 749203 - 749222 + g 86 -4.3 -5.45813 | TTAAAGAAATCAGCT CATCCAG TCGGTT TTGGATG TTTTCTTTTTTAATC jhp0669 750932 - 749817 - | hypothetical protein jhp0670 751567 - 750989 - | hypothetical protein TERM 685 751037 - 751055 + g 70 -3.1 -4.95854 | overlap 751039 AAATCGTCCATACCT CTGTTTG CGAAT CAAACTG TTTTTGGATTTTTTC jhp0671 752989 - 751670 - | hypothetical protein TERM 686 752957 - 752972 + g 71 -4 -4.94058 | ACAACCTAATGAGAT CAAGCA GAGT TGTTTG TTTTCTTTAACTTGC gpt 753452 - 752991 - | xanthine-guanine phosphoribosyltransferase jhp0673 754570 - 753461 - | putative aminotransferase TERM 687 754040 - 754053 + g 71 -6.7 -4.06687 | opp_overlap 754016 754039 ACTCCCTCCAATGAG CGCAT CAAC ATGCG TTATTTCTAAAGGCT TERM 688 754129 - 754140 + g 85 -5.8 -5.24531 | GGTTAGTTTCTTTGA TCGC TTGA GCGA TTTTTTCTACAGGGT TERM 689 754790 - 754780 - g 72 -3.2 -5.0538 | GGGTATTCTAAAAAA GCTC CTG GAAC GATAGGGAGTTTAGT pgpA 754717 - 755193 + | phosphatidylglycerophosphatase A TERM 690 755365 - 755375 + G 78 -2.6 -5.47218 | GTTAAAGGATAGGAT TAAA TAT TTTA TTTTTTTAGATGAAA TERM 691 755938 - 755952 + G 79 -5.8 -4.87807 | opp_overlap 755937 AGCCGGCTGTAAGAT CAAAAA GGG TTTTTG TTTTTCCTATGTTGA ddl 755270 - 756313 + | D-alanyl-alanine synthetase A jhp0676 756314 - 757039 + | 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase murF 757026 - 758507 + | D-alanyl-D-alanine-adding enzyme jhp0678 758517 - 759002 + | HIT family protein prsA 759067 - 760023 + | ribose-phosphate pyrophosphokinase rodA_1 761219 - 760074 - | putative rod shape-determining protein TERM 692 760474 - 760462 - G 79 -4.8 -5.09259 | TAGGCGAAAATAAAA TCGC TCGTT GCGA TAGGCAAGAATTTGA jhp0681 762454 - 761242 - | hypothetical protein jhp0682 762588 - 763571 + | hypothetical protein jhp0683 763522 - 764781 + | hypothetical protein TERM 693 764834 - 764853 + GF 82 -4.2 -5.50723 | opp_overlap 764834 764836, overlap 764834 764836 TCCAAGCCTTTAGAA TACCCCTT AATA AGGGGGGA TTTTTGTTTTCATAG TERM 694 764850 - 764836 - gf 82 -10 -3.224 | opp_overlap 764834 764834 764836, overlap 764834 CAAGCCTTTAGAATA CCCCTT AAT AAGGGG GGATTTTTGTTTTCA TERM 695 765415 - 765404 - gf 76 -2.2 -5.37345 | TGGAATGAGAAAAAA CACC GCCG AGTG TTAAGCGAAAAGTTT trmB 764792 - 765994 + | tRNA (guanine-N(7))-methyltransferase jhp0685 765969 - 766640 + | ABC transporter ATP-binding protein jhp0686 766627 - 767433 + | hypothetical protein TERM 696 768037 - 768025 - g 80 -7.7 -4.45817 | overlap 768017 AACCGAACAAAATAA GCTCA TTT TGAGC ATGCAAAAAGATTAT TERM 697 768379 - 768363 - g 71 -5.1 -4.59773 | overlap 768365 CGCTAGTGTCAAAAA CCCCAAA CGC TTTGGTG CGTAATGTTTTAGAC jhp0687 767426 - 768628 + | hypothetical protein jhp0688 768725 - 769084 + | flagellar protein FlaG TERM 698 770409 - 770397 - g 71 -4.8 -4.64144 | AAGAATTTGCAAAAA GCGA GCGAT TCGC AATTCACTTACAATG fliD 769101 - 771158 + | flagellar capping protein fliS 771200 - 771580 + | flagellar protein FliS jhp0691 771567 - 771806 + | hypothetical protein jhp0692 771859 - 772566 + | hypothetical protein jhp0693 772532 - 772678 + | hypothetical protein TERM 699 772801 - 772778 - g 86 -4.7 -5.43866 | gap 1, opp_overlap 772782 CAAGCGCTAAAAAAA CACC-CTAAA ACCAA TTTAGTGGTG TTGCAAGAATTGAAC TERM 700 773265 - 773251 - g 90 -3.5 -5.87996 | TAACGAAGAAAAAAA GCGTC AGCAA AACGC ATGGGAGACGATCCA jhp0694 772682 - 773560 + | hypothetical protein TERM 701 773642 - 773616 - f 70 -8.1 -3.13177 | opp_overlap 773608 773617 773631 773632, overlap 773633 ACATGGTAGATGCAA TTTTTTGCGCT AAACA AGCGCAAAAAT TCTATCATTTTTGCG TERM 702 773617 - 773641 + F 93 -11.6 -3.72037 | opp_overlap 773616 773633, overlap 773608 773631 773632 CATGGTAGATGCAAT TTTTTGCGCT AAACA AGCGCAAAAA TTCTATCATTTTTGC TERM 703 773658 - 773633 - f 89 -10.6 -3.90744 | opp_overlap 773617 773608 773632 773631, overlap 773616 TTTTGCGCTAAACAA GCGCAAAAAT TCTATC ATTTTTGCGC GGTATCTTTATTTTA jhp0695 773687 - 775000 + | hypothetical protein jhp0696 775063 - 776316 + | hypothetical protein jhp0697 777906 - 776317 - | phosphodiesterase TERM 704 777358 - 777374 + gT 72 -3.6 -5.11033 | opp_overlap 777359, overlap 777359 777371 GGCTTCTTTTTCATA ACGCCT GATCA AGGCGC TTTTTTGCGCTTCTA TERM 705 777359 - 777373 + gT 70 -7.1 -3.65535 | opp_overlap 777359, overlap 777358 777371 GCTTCTTTTTCATAA CGCCT GATCA AGGCG CTTTTTTGCGCTTCT jhp0698 778408 - 777806 - | hypothetical protein jhp0699 778572 - 779129 + | hypothetical protein ftsY 779135 - 780016 + | hypothetical protein TERM 706 780122 - 780111 - T 74 -2.2 -5.69473 | overlap 780103 TAGATTATAAAAAAA CGCT TTTT AGCA TTTTCATAAGGGGTA jhp0701 780656 - 780303 - | hypothetical protein jhp0702 781190 - 780684 - | hypothetical protein jhp0703 782001 - 781141 - | hypothetical protein TERM 707 781476 - 781453 - GR 72 -4.6 -4.72386 | overlap 781445 GAAATGATCCAAAAA GTTTGAAACC GTAT GGCTTAAAAC ATGGAGTTTTTTCTC jhp0704 782561 - 782013 - | hypothetical protein TERM 708 782465 - 782484 + g 70 -3.6 -4.87133 | overlap 782467 TGCTCCCCATAGCTA TACTGCTT AAAA AAGTAGTG TTTTCTTTCCCAAGT TERM 709 782530 - 782540 + g 71 -6.8 -4.05035 | ACCCTATCAATCTTT CCAC TTT GTGG TCTTTTCCTTTTTTT moaA 783891 - 782926 - | molybdenum cofactor biosynthesis protein A mobA 783977 - 784606 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 710 785522 - 785509 - gT 73 -2.3 -5.23292 | opp_overlap 785509 785510, overlap 785504 TTATAGAAAATAAAA CGCTC GCTA GAGAG CTTTATAGAGACGTG flhB 784575 - 785651 + | flagellar biosynthesis protein FlhB jhp0708 786483 - 785746 - | hypothetical protein amiA 787911 - 786502 - | N-acetylmuramoyl-L-alanine amidase TERM 711 787399 - 787439 + g 80 -6.1 -4.79451 | opp_overlap 787406, overlap 787406 787409 AGCGCTCCTTTCGTT CAATGGAGAGTGCGCATGC TTT GAATGCGCATGCTTAGTTG TTTTCTCTTTAGCCT TERM 712 787409 - 787429 + g 72 -9.7 -2.93765 | opp_overlap 787406, overlap 787406 787399 TCGTTCAATGGAGAG TGCGCATGC TTT GAATGCGCA TGCTTAGTTGTTTTC TERM 713 787545 - 787558 + g 74 -4.5 -4.88736 | overlap 787532 787546 TGGGTGTCATTTGAT GCCTT ATTA AGGGC TTTTTCTCCATAATA TERM 714 787602 - 787616 + g 73 -7.2 -4.08767 | overlap 787592 TGTCTTTAAGAATCT TGACTT CAT AAGTCA TTTTAGGAGCATAGC jhp0710 789009 - 787918 - | hypothetical protein tyrS 790234 - 789026 - | tyrosyl-tRNA synthetase TERM 715 789861 - 789874 + g 81 -6.7 -4.80882 | opp_overlap 789861 789860 CAAGCGGAATTAAAG CACAC TTCG GTGTG TTTTTGATCTAAAAT spoT 792584 - 790254 - | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase TERM 716 790787 - 790768 - G 74 -4.4 -5.00616 | overlap 790777 TTGGGGGTTAAAAAA TTCAAAAC ATTG GTTTTAAA ACCCAAATATCTCAA TERM 717 791788 - 791776 - G 71 -6.9 -4.0777 | opp_overlap 791776, overlap 791739 AGATAAATAGAATAA GGGCG TTT CACCC TTGTAACGAGTTTAA jhp0713 792795 - 792571 - | DNA-directed RNA polymerase subunit omega pyrH 793559 - 792837 - | uridylate kinase jhp0715 794333 - 793650 - | hypothetical protein TERM 718 794038 - 794053 + g 73 -5.4 -4.55295 | opp_overlap 794051, overlap 794034 794051 AACACTTTAGAGAGG GCGTTT GAAG AAGCGC TTTCTTTGTCAAAAG TERM 719 794530 - 794513 - g 82 -4.1 -5.38054 | gap 1, overlap 794515 TTTTAGAAAGAAAAA GTGA-GGG TAT CCCGCCAC TCCCTTTAAACGCTA TERM 720 796377 - 796366 - g 81 -5.8 -5.04385 | GAGACTTTGAAAAAA CGCA GAGA TGCG ATGCAAGCTTGGGTG acnB 794464 - 797022 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 721 797035 - 797056 + F 87 -10.3 -3.71873 | opp_overlap 797040, overlap 797040 TAGTTTTGTTTTCAT TAAAAGGGA ATGA TCCCTTTTA TTTGGCTATGACTGA TERM 722 797040 - 797051 + F 78 -5.8 -4.92385 | opp_overlap 797040, overlap 797035 TTGTTTTCATTAAAA GGGA ATGA TCCC TTTTATTTGGCTATG jhp0717 797103 - 797369 + | hypothetical protein TERM 723 797498 - 797512 + F 82 -8.6 -4.12942 | overlap 797499 GGTTTTGGCTCTGTA TCCCTA TAA TAGGGA TTTTACAGGGTTTGA jhp0718 797664 - 798953 + | hypothetical protein TERM 724 799204 - 799194 - g 71 -6.8 -3.96618 | CTCAATTCCAAAGAA GGGA TTT TCCC TACAGCCACCTTTGT TERM 725 800362 - 800352 - g 73 -6.8 -4.15044 | GGCCCTTTCAACAAA GCCT TTA AGGC TGACGCACAAGATAG jhp0719 799047 - 800414 + | putative Outer membrane protein TERM 726 800468 - 800444 - T 77 -10.1 -2.59431 | opp_overlap 800444 GTTTGGTAGAATTGA GCCATTGTTTT TGG AAATCAATGGC TTTTCTCAATTCGGC TERM 727 800444 - 800468 + T 93 -10.1 -4.4715 | opp_overlap 800444 GTTTGGTAGAATTGA GCCATTGTTTT TGG AAATCAATGGC TTTTCTCAATTCGGC jhp0720 800948 - 800421 - | hypothetical protein TERM 728 800711 - 800728 + g 70 -2.7 -5.14965 | GCTTAGGCTCTAAAA TCAAGCG CAAA TGTTTGA TTTTTTCATGCAAAT TERM 729 800917 - 800907 - G 91 -8.2 -5.18371 | GCTCACAAAATAAAA GGGC AAC GCCC ACCTTCTAAAACGAG jhp0721 801287 - 801418 + | hypothetical protein lolA 801987 - 801433 - | outer-membrane lipoprotein carrier protein TERM 730 803526 - 803514 - g 72 -3.3 -5.08824 | GCTTTACTCAAAAAA GAGCG CAT CCCTC ACACCGTTTTAAACG secA 802134 - 804731 + | preprotein translocase subunit SecA jhp0724 804721 - 805953 + | hypothetical protein jhp0725 806232 - 807731 + | putative Outer membrane protein TERM 731 807767 - 807744 - T 71 -7.6 -3.53761 | gap 1, opp_overlap 807750, overlap 807750 TAACCCCCCTTTAAA TAAC-AACCCT TTA AGGGTTTGTTA AAACGCCCAACCTAA TERM 732 807750 - 807760 + T 71 -6.8 -4.15044 | opp_overlap 807750 807744 CCCTTTAAATAACAA CCCT TTA AGGG TTTGTTAAAACGCCC TERM 733 807760 - 807750 - T 71 -6.8 -4.08557 | opp_overlap 807750, overlap 807744 CCCTTTAAATAACAA CCCT TTA AGGG TTTGTTAAAACGCCC hsdS_4 809307 - 807943 - | putative type I restriction enzyme (specificity subunit) TERM 734 808684 - 808699 + g 70 -2.6 -5.03747 | TAAAAGCATGTTTTG GTAATA CTGA TATTGC TTTTTTCGCGCGTTT TERM 735 809282 - 809297 + g 71 -4 -4.89562 | opp_overlap 809257, overlap 809284 TTAGGTGCTAGAGTG TGGAGT AATA ACTCTA TTTTGTTCATTTTGC TERM 736 809357 - 809347 - R 83 -6.8 -4.87665 | CGCTAGCGATAAAAA GGCT TTA AGCC CTCATCGTGCGCATG hmcT 811411 - 809351 - | putative heavy-metal cation-transporting P-type ATPase jhp0728 812956 - 811436 - | hypothetical protein TERM 737 811800 - 811811 + g 70 -3.6 -4.9218 | opp_overlap 811798, overlap 811804 CTGTCCAAAAAAGGC TCGC TCAA GCGG TTTTTATACTGCGTG TERM 738 812045 - 812032 - G 84 -2.4 -5.86965 | opp_overlap 812043 ATTCATCAAAAAAAA GCAT GCCGTT ATGC GCTAGCGCGATTTCG TERM 739 812404 - 812422 + g 73 -2.4 -5.22312 | CTTTATCGTTCAATT CTATCGTT TTA AAAGGTAG TTTTTTCGTGTGGGT TERM 740 812535 - 812556 + g 75 -8.1 -4.13767 | gap 1, opp_overlap 812521 AGCGAAAAAAGCTCT TCATT-CGCC TTA GGCGCAATGA TTTTGGCATGGGGGC def 813486 - 812962 - | peptide deformylase TERM 741 813041 - 813027 - G 73 -7.2 -4.09685 | TCTTACGCTTCAAAA TGGATA ATT TATCCA CGAATAACACGCCAT TERM 742 813440 - 813423 - G 80 -6.3 -4.78077 | opp_overlap 813423 TTGAATCAAAAGAAA CGACTTC TTTA GAAATCG TTCTTAAAATTTTAG clpP 814078 - 813491 - | ATP-dependent Clp protease proteolytic subunit tig 815454 - 814099 - | trigger factor jhp0732 816403 - 815567 - | putative Outer membrane protein hpaA 817207 - 816425 - | neuraminyllactose-binding hemagglutinin precursor moaC 817802 - 817326 - | molybdenum cofactor biosynthesis protein C mogA 818341 - 817811 - | molybdenum cofactor biosynthesis protein TERM 743 818154 - 818173 + g 80 -6.4 -4.66609 | TCGCATTGGTATTCA TCGCACAT TTTA ATGAGCGA TTTTTCAATCAAATC moaE 818791 - 818354 - | molybdopterin converting factor, subunit 2 moaD 819013 - 818792 - | putative molybdopterin converting factor, subunit 1 ribA 819640 - 819062 - | GTP cyclohydrolase II jhp0739 820569 - 819730 - | hypothetical protein ribBA 821690 - 820656 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein TERM 744 820890 - 820878 - G 72 -3.3 -5.07107 | TAAAGCCTTAAAAAA CGCTT CAA ACGCG CCAGTCGTTAAAAAA TERM 745 820921 - 820906 - G 70 -2.6 -5.02074 | overlap 820912 CCAGTCGTTAAAAAA TCAAAA TCCT CTTTGA TAGGATGGAAACGCA jhp0741 822666 - 821788 - | putative lipopolysaccharide biosynthesis protein TERM 746 823266 - 823280 + G 79 -10 -3.53091 | opp_overlap 823263 TTGCCCTAATTACCG CGCTCT AAG AGAGCG TTTAAAACAAAGGGT jhp0742 822715 - 823335 + | hypothetical protein fecA_2 825724 - 823346 - | iron(III) dicitrate transport protein TERM 747 825786 - 825772 - R 70 -4.4 -4.85599 | opp_overlap 825763 TGCATGTTATAAAAA TAATTA TTA TAATTA ACTTAAATTTTGAAG acpS 826281 - 825922 - | 4'-phosphopantetheinyl transferase TERM 748 826164 - 826147 - G 71 -4.8 -4.62471 | opp_overlap 826147 826148, overlap 826148 TTTAAGCGCGAAAAA CCCAGC GATACT GCTGGA TTTATCCTTGCATAA TERM 749 826230 - 826205 - G 83 -4.8 -5.24129 | opp_overlap 826227 826228, overlap 826228 CTTGGTGATAAAAAA CGCTCTAAAA ACCTCA TTTCAAAGCG TTTCACGCACTTTTC fliL 826839 - 826288 - | flagellar basal body-associated protein FliL jhp0746 827450 - 826848 - | hypothetical protein jhp0747 827755 - 827429 - | hypothetical protein TERM 750 827759 - 827749 - G 78 -2.6 -5.47159 | overlap 827743 TGCAAGAAAGAAAAA TTTT CAA AAAA CCCCCTTTATCCCAT jhp0748 829219 - 828209 - | hypothetical protein TERM 751 828460 - 828444 - G 74 -3.7 -5.00895 | CGCACCAGAGAAAAA TTGACAT CAT AAGTCAA ATCGCTTTGCTGATA TERM 752 829719 - 829734 + G 91 -11.8 -3.9093 | AATATTGGCATTTCC CCGGGC ACAC GCCCGG TTGTTCTATCATAGA jhp0749 829352 - 829969 + | hypothetical protein TERM 753 830467 - 830483 + G 80 -6.5 -4.72272 | CGTTTTACCCCATAG CGCATGC TTA GCGTGTG TTTTTGATAAGCCCC TERM 754 830707 - 830661 - g 76 -2.4 -5.44119 | gap 1, opp_overlap 830677, overlap 830646 830666 830669 830677 TGGATTTTAAAAAAA TTCAAGCAC-CCAAAAACCCT GATTGT AGGGTTTGTGGCACGCATAAA ATCACGCATTTACAA moeB 829970 - 830737 + | molybdopterin-synthase sulfurylase TERM 755 831207 - 831236 + G 86 -12.2 -3.34501 | opp_overlap 831207, overlap 831197 AGACTGCCGGTGAAA CCGCTCCTACTA TGGGGT TAGTGGGGGCGG TTATGGGGCTTATGT motA 830753 - 831526 + | flagellar motor protein MotA TERM 756 831996 - 831982 - g 75 -5.6 -4.7329 | opp_overlap 831981, overlap 831984 AAAATCATTCAAAAA CTCCCT AAA AGGGTG CATATTAATGTGAGA motB 831529 - 832302 + | flagellar motor protein MotB jhp0753 832299 - 832745 + | hypothetical protein jhp0755 833793 - 833221 - | hypothetical protein jhp0754 832859 - 833344 + | putative osmoprotection binding protein jhp0756 834605 - 833787 - | putative type II DNA modification enzyme (methyltransferase) TERM 757 834170 - 834187 + g 70 -3.5 -4.83759 | overlap 834183 TTCTTGCAGTGGGTT CTTTTAA TGGA TTGAAAG TTTTTGGCTTTCCTT jhp0757 834901 - 836562 + | putative osmoprotection binding protein TERM 758 836740 - 836730 - g 71 -6.8 -4.08216 | TTAGGGCTTTTAAAA CCCA GTC TGGG GAGCGTTAAAATCTT TERM 759 837224 - 837181 - g 84 -6.8 -4.88067 | AGTTAGCCACAAAAA CCCTAGAAATCAAAGCCCTT AAAC AAGAGCAGTGATTTTTAAGG CTGATTTAAAAATTC jhp0758 836565 - 837215 + | osmoprotection ATP-binding protein jhp0759 837390 - 837851 + | hypothetical protein TERM 760 838977 - 838966 - g 76 -2.2 -5.4833 | TTAGCCAAGAAAAAA CCTC TAAT GAAG ATCGGATCTTAGAAG uvrC 837852 - 839636 + | excinuclease ABC subunit C hom 839646 - 840911 + | homoserine dehydrogenase jhp0762 840912 - 841256 + | hypothetical protein trxA 841348 - 841668 + | thioredoxin TERM 761 841742 - 841758 + G 90 -8.7 -4.86731 | opp_overlap 841740 TTATGCCACTAGAGG CGGTGTT AAA AACGCCG TTTTATTTGAAAAAG TERM 762 842180 - 842203 + G 71 -6 -4.2349 | opp_overlap 842180 TATCTGCAAAAAAGT CTATCTCATC CACA GAAGAGATGG TTTTAGGTGTGCGCC trxB_1 841674 - 842609 + | thioredoxin reductase TERM 763 842616 - 842644 + F 77 -7.5 -3.97636 | opp_overlap 842614 842611, overlap 842613 CACCATTAAATCAGG CTTATAGCCCTAG ATT TTAGGGTTATGGG TTTCTCGCTTCAAAT jhp0765 842976 - 843797 + | putative lipopolysaccharide biosynthesis protein TERM 764 844004 - 843969 - T 76 -7.2 -4.26327 | gap 1, opp_overlap 843975, overlap 843973 843975 GACGCATTAAAAGAA TGAAGAGCATTAGAAAA CTA TTTTCTAATGCT-TTAA AATTAAGACTTTTTA TERM 765 844001 - 843973 - T 87 -10.5 -3.70405 | opp_overlap 843975, overlap 843969 843975 CATTAAAAGAATGAA GAGCATTAGAAAA CTA TTTTCTAATGCTT TAAAATTAAGACTTT TERM 766 843975 - 843999 + T 100 -13.1 -3.66356 | opp_overlap 843975 843973 843969 TTAAAAGAATGAAGA GCATTAGAAAA CTA TTTTCTAATGC TTTAAAATTAAGACT TERM 767 843999 - 843975 - T 100 -13.1 -3.41416 | opp_overlap 843975, overlap 843973 843969 TTAAAAGAATGAAGA GCATTAGAAAA CTA TTTTCTAATGC TTTAAAATTAAGACT jhp0766 844255 - 844007 - | hypothetical protein atpB 845263 - 844583 - | F0F1 ATP synthase subunit A TERM 768 845297 - 845315 + r 85 -9 -4.10429 | opp_overlap 845311 845312, overlap 845312 CTTATTGAAAATTTC CTTAATTG TAG CAATTAAG TTTTAAAAACTCATT guaB 846830 - 845385 - | inositol-5-monophosphate dehydrogenase TERM 769 845424 - 845437 + g 79 -6.7 -4.64861 | TTTAGTAATATCCAC GCCAT GCAC ATGGC TTTCTTTTAACCCCG gatA 848201 - 846840 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 770 847621 - 847607 - G 85 -7.2 -4.87803 | opp_overlap 847606 847609 TAGCGTCAAATAAAA TAGAAG CGT CTTCTA CATTTTGCGTGATAG coaE 848850 - 848260 - | dephospho-CoA kinase speE 849640 - 848852 - | spermidine synthase TERM 771 849453 - 849465 + g 76 -9.1 -3.70902 | opp_overlap 849453 CAACCCCCCATATGA GCGAG CAA CTCGC TTTCAATGTGCAAAA jhp0772 850623 - 849733 - | hypothetical protein TERM 772 851805 - 851790 - g 77 -6.2 -4.59117 | opp_overlap 851789 851790 AAATCAAGCATAAAA TCATAG AAGT CTATGA GTGTTTTTCCAAACG engA 850700 - 852088 + | GTP-binding protein EngA TERM 773 852176 - 852196 + F 95 -10.5 -4.15453 | GCTCAATCAGCTAGG CTAAGCGAT TGA ATCGCTTGG TTTTGGCATCCATTA jhp0774 852229 - 852513 + | DNA-binding protein HU TERM 774 852528 - 852556 + F 74 -3.9 -5.26918 | AGTCTGATCCACTCA GCAAGGGGCTT ATCAATA AAGTTTCTTGC TTTTTTATAAAATGT TERM 775 852837 - 852821 - f 91 -8 -4.93365 | TTTTACAATTAAAAA GCTTGC GAAAA GCAAGC GATAACCTCTATAAA jhp0775 853193 - 853798 + | hypothetical protein jhp0776 853818 - 854435 + | hypothetical protein TERM 776 854424 - 854414 - f 79 -6.8 -4.57218 | AGAAGACAATGAAAA CGCT GAT AGCG AGCTTCAATGAAAAA jhp0777 854432 - 856195 + | putative Outer membrane protein jhp0778 856199 - 857200 + | putative sugar nucleotide biosynthesis protein TERM 777 858461 - 858443 - g 71 -6.8 -4.1196 | AAGCGAGCTTTAAAA TCCTTGAT TTT ATCAAAGA CAACGCCCTTTAATG dfp 857197 - 858474 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 778 859004 - 858981 - g 80 -4.6 -5.22943 | ATGAAAGCCAAAAAA CAAAGCGT TGATTTTT ACGCTCTG TACCCTAACTTGGGC jhp0780 858474 - 859211 + | hypothetical protein TERM 779 859219 - 859233 + T 72 -8.6 -2.99562 | overlap 859218 TAGGGTAAGTTTTTA GCGTTT TAA AAACGC CTTTATAATGGATTT TERM 780 859272 - 859284 + T 76 -3.3 -5.40004 | opp_overlap 859251 859267 859272 TTTTATCCAATAAAA GAGCG ATA CCCTC TTTTTTACTTTAATC TERM 781 859298 - 859327 + T 82 -6.5 -5.08011 | opp_overlap 859302, overlap 859300 TCTTTTTTACTTTAA TCCATGCGGAATT TTAG AATTCCTCATGCA TTTTTTAAAAGTTTT TERM 782 859300 - 859325 + T 72 -9.1 -2.76823 | opp_overlap 859302, overlap 859298 TTTTTTACTTTAATC CATGCGGAATT TTAG AATTCCTCATG CATTTTTTAAAAGTT thiE 859974 - 859321 - | thiamine phosphate pyrophosphorylase thiD 860776 - 859967 - | phosphomethylpyrimidine kinase TERM 783 860135 - 860147 + g 70 -3.3 -4.88228 | AGACAAAGTACAACC CGTGC CAT GCGTG TTTTTGGTGTTGAAT thiM 861552 - 860773 - | hydroxyethylthiazole kinase hsdR_2 864272 - 861645 - | type I restriction enzyme restriction subunit TERM 784 864773 - 864732 - R 100 -15.3 -3.34236 | gap 1 AAATTCATTTTATAA GGGGAT-AGGGGGGTATTTT GCG ATAATACCCCCCTTAACCCC CTTAAGATCCCCCTA hsdS_2 865451 - 864828 - | type I restrictionenzyme (specificity subunit) TERM 785 865135 - 865125 - G 70 -2.6 -5.10601 | ATAAAAGTATAAAAA TTTT GTT AAAA GCTCGTTAGTATCTT TERM 786 865343 - 865357 + g 100 -7.2 -5.84381 | TTACTTCGCTCACTT CACTTA TTT TAAGTG TTTTTTTATTGGTGC hsdM_2 867048 - 865462 - | Type I restriction enzyme modification subunit TERM 787 865491 - 865515 + g 86 -4.4 -5.49809 | gap 1 CTTTGATGATGGATT CAAGGCTGTTT CTTA AAAC-GCTTTG TTTTTTTACGATTTG TERM 788 867278 - 867266 - g 100 -4.7 -6.10295 | GTAAGAGAAAAAAAA GCGGC TAA GGCGC TTGGGATTGTGGGGA jhp0787 867227 - 867913 + | hypothetical protein TERM 789 867907 - 867917 + T 85 -6.8 -5.07567 | opp_overlap 867906, overlap 867864 867861 ACGCCCTTATAAAGC CGCT TAA AGCG TTTTTTAAAATCTCA jhp0788 868897 - 867956 - | hypothetical protein TERM 790 868569 - 868593 + g 71 -6.5 -4.14392 | GGGTGCAAATCTCTT TCATGCATGAT TTT ATTATGCACGA TTTTAACGCTTGAAA jhp0789 870495 - 868894 - | ABC transporter ATP-binding protein TERM 791 869426 - 869409 - G 83 -9.1 -3.97406 | opp_overlap 869408 CTAAAATCTTACAAA GCGTGGA TTTA CCCACGC CGTTTGGCCCTATGA guaC 870697 - 871674 + | guanosine 5'-monophosphate oxidoreductase gmhA 872276 - 871698 - | phosphoheptose isomerase waaE 873660 - 872269 - | putative ADP-D-glycero-D-mannoheptose synthase TERM 792 872825 - 872837 + g 70 -3.4 -4.87291 | opp_overlap 872818 TTAGCAAACTCGCAA GCTT CTTTC AAGC TTTTTGATTCCAATA gmhD 874646 - 873657 - | ADP-L-glycero-D-mannoheptose-6-epimerase jhp0794 875180 - 874656 - | hypothetical protein jhp0795 875904 - 875167 - | hypothetical protein TERM 793 875389 - 875374 - G 76 -6.8 -4.47707 | overlap 875375 CCCCATTAAAAACAA CGGCAC GCTA GTGCCA AGCCCAAAAGAAAGG jhp0796 876566 - 875895 - | pantothenate kinase jhp0797 878196 - 876571 - | hypothetical protein jhp0798 878857 - 878201 - | hypothetical protein TERM 794 878408 - 878430 + g 70 -2.6 -5.00884 | overlap 878395 CACTTCTTGTAAAGC GCTCATTTCT TTA AGAATGGGGC TTTTTTCAAGCAGGT dut 879291 - 878854 - | deoxyuridine 5'-triphosphate nucleotidohydrolase greA 879775 - 879281 - | transcription elongation factor GreA TERM 795 879593 - 879613 + g 83 -5.3 -5.27335 | overlap 879596 GCTTAAATCCACGAT CCTCGCTTC AAT GAAGCGTTG TTTTTCTTTAGCGGC TERM 796 879596 - 879610 + g 93 -10 -4.72696 | overlap 879593 TAAATCCACGATCCT CGCTTC AAT GAAGCG TTGTTTTTCTTTAGC lpxB 880898 - 879816 - | lipid-A-disaccharide synthase jhp0802 881359 - 880898 - | hypothetical protein hypA 881719 - 881366 - | hydrogenase nickel incorporation protein flgE 883934 - 881778 - | flagellar hook protein FlgE TERM 797 884096 - 884070 - R 80 -7.2 -4.59993 | overlap 884072 AAATTCACAAATAAA TAGGGGGTTTTG TAA CACCACCCCCCA TAACGCTTTTTAAAG TERM 798 884094 - 884072 - R 74 -7.6 -3.89305 | overlap 884070 ATTCACAAATAAATA GGGGGTTTTG TAA CACCACCCCC CATAACGCTTTTTAA cdh 884877 - 884143 - | CDP-diacylglycerol pyrophosphatase TERM 799 885068 - 885050 - H 72 -2.5 -5.38249 | ACTAACTACAAAAAA CTTAAAA AGCGA TCTTAAG GGGTTGATACTTATC phnA 885154 - 885483 + | putative alkylphosphonate uptake protein jhp0807 885756 - 885541 - | hypothetical protein jhp0808 886719 - 885841 - | hypothetical protein TERM 800 886853 - 886834 - R 70 -6.4 -4.33258 | overlap 886828 ATTGTGAAAGACAAA GCGTCCCT AAAA AAGAACGC TCAAAGAAAAGGGTT TERM 801 886859 - 886876 + r 72 -4.9 -4.82667 | opp_overlap 886859 AAAAGAACGCTCAAA GAAAAGG GTTA CTTTTTC TTTTTCATGTGATGC katA 888384 - 886867 - | catalase TERM 802 888595 - 888568 - H 85 -8 -4.71463 | opp_overlap 888566 888568 AATGAAAATAAGAAA GATTAAAAACAA AATT TTATTTTTAATC TAGTTTTAATAATAA frpB_1 888708 - 891083 + | putative IRON-regulated outer membrane protein ruvC 891557 - 891084 - | Holliday junction resolvase TERM 803 891210 - 891233 + g 75 -3 -5.1925 | opp_overlap 891193, overlap 891212 CACTTGCTCTTTAGC GGCTTTCCCG TTAC CGGTAAGGGC TTTTTTGACTTGTAA TERM 804 891927 - 891916 - g 84 -2.2 -5.79588 | CCAAAATGAAAAAAA TCCG GGAA CAGA AATGAAAATCTTCAC jhp0812 891689 - 892420 + | hypothetical protein TERM 805 893213 - 893188 - T 71 -7.7 -3.45768 | TGTAACATTAATGAA TGGGTTAGAAA ATAT TTTCTAATCCA TGCTAAAAACACTTT TERM 806 893233 - 893223 - T 71 -5.4 -4.63184 | AATCCATGCTAAAAA CACT TTA AGTG TGCCAAGAGACCCTG jhp0813 893966 - 893499 - | hypothetical protein jhp0814 894228 - 893875 - | hypothetical protein TERM 807 893902 - 893913 + g 75 -3 -5.25799 | TTGGCTTGTTCGTTT GTTA GTCC TAAC TTTTTGTATTGTTTT TERM 808 894111 - 894129 + gr 83 -6 -5.04325 | overlap 894125 TTTCATAACCTGTTA TCACCCAA TGA TTAGGTGA TTTTTCTCCTTTCCA ruvA 894902 - 894351 - | Holliday junction DNA helicase motor protein TERM 809 894545 - 894516 - G 70 -3.6 -4.86621 | ATCTTGAATGAAAAA GCCAATCAAATC CACCAT GATCTTATCGGC GAGCTTTTTCCCTAT jhp0816 896773 - 894929 - | hypothetical protein TERM 810 895462 - 895442 - G 72 -3.1 -5.05153 | overlap 895438 AGCGTAAAAAATAAA GCGGTTGCC ATT GCCATCCAC CTCATCAATCCAACA TERM 811 895949 - 895979 + g 82 -6.2 -4.96657 | overlap 895953 CATTTTAACCCCTTG TAAGGCTTTGGAGT AAT ACACTAAAGCGTTA TTTTCTTCTCTTTCT TERM 812 897396 - 897383 - g 80 -2.3 -5.63517 | opp_overlap 897383 TTTCTAAAGAAAAAA CGCAT TTAG AAGCG TTGTATTATTTGAGC TERM 813 897805 - 897825 + G 87 -3.2 -5.86061 | opp_overlap 897800, overlap 897808 CAGGATTTAATCTTA CAACGCTT GCAAA AGGCGTGG TTTTTTTTGGTGGGG jhp0817 896944 - 898326 + | hypothetical protein cysS 898327 - 899724 + | cysteinyl-tRNA synthetase TERM 814 899901 - 899927 + F 83 -10.3 -3.22298 | TAAAAGTTTAACATT GGTTGTGGATA CTACA TATTCACAACC TTAATCGTAAATGCA TERM 815 901043 - 901018 - g 85 -11.3 -3.35526 | CAAGGATAAACCTAA TAGTACCACTT CTCA AAGTGGCACTA AAAACGACAAGAAAG TERM 816 901463 - 901453 - g 72 -4.6 -4.8048 | opp_overlap 901453 TGTGGATACTAAAAA CGGC ACA GCCA CTTTCAATAACGATA TERM 817 902528 - 902512 - g 70 -8.7 -3.35996 | TACGCCTACTGAGAA TGGTGGC AAT ACCACCA ACTTACCCACAAACA vacA 900011 - 903877 + | vacuolating cytotoxin TERM 818 903909 - 903890 - T 73 -7.8 -3.63782 | overlap 903880 903891 TAATACCATTCTAAA GCCCATGC TTTG GCATGGGG GGTGATGAGTTAAAA TERM 819 903908 - 903891 - T 86 -11.3 -2.77787 | overlap 903880 903890 AATACCATTCTAAAG CCCATGC TTTG GCATGGG GGGTGATGAGTTAAA TERM 820 903975 - 903954 - T 73 -8 -3.53224 | GAGTGTGTTTGCAAA CCAACCCC AAATAA GGGGTTAG CCTTCAAAATAAACT jhp0820 905115 - 903994 - | putative lipopolysaccharide biosynthesis protein TERM 821 904263 - 904253 - G 79 -5.4 -4.91109 | TCGTCAGCATAAAAA TGCA ACA TGCA AGCGTCAGATTTTTT TERM 822 904789 - 904778 - G 79 -5.8 -4.86001 | overlap 904765 ATCATTTTAGAAAAA CGCT TTTT AGCG AAAGGATTGAGTCTT fecE 905946 - 905179 - | IRON(III) dicitrate transport system ATP-binding protein fecD 906926 - 905946 - | iron(III) dicitrate transport system permease protein TERM 823 906549 - 906539 - G 71 -6.8 -4.11692 | TATTCATCGCTAAAA CAGC AAG GCTG GGCAAAATCGCCCCA jhp0823 907734 - 906919 - | hypothetical protein TERM 824 907341 - 907324 - G 73 -5.5 -4.59853 | GTAATGGCCTAAAAA GAGCATG CTCA CACGCCC CGCTATGGAAGAAAG TERM 825 907730 - 907742 + g 83 -4.8 -5.19003 | GCCCCAGTGATAACC GCCA CCTTT TGGC TTTCTTTTTTCTCTT TERM 826 907866 - 907883 + H 74 -5.7 -4.57341 | ATATAGTTCTTGGAA TGTTTTT TACA AAAAACA TTTTTAACACCAATT TERM 827 908159 - 908175 + G 70 -2.9 -5.00884 | opp_overlap 908149 908147, overlap 908147 AAATACCCCATTCCT GTGGGGA ATT TGCTCAC TTTTTTAGCCAGCAT jhp0824 907916 - 908440 + | hypothetical protein jhp0825 908817 - 908515 - | hypothetical protein TERM 828 908937 - 908918 - R 79 -10 -2.9462 | opp_overlap 908917 908918, overlap 908930 908934 TATCTAGTGAAACCA CCCCTTGC TAAA GCAAGGAG CTTCCTAACTAAAGC tnpB 910294 - 908966 - | IS606 transposase tnpA 910322 - 910516 + | IS606 transposase TERM 829 910609 - 910628 + T 93 -9.2 -4.78107 | opp_overlap 910598 910596 GATATGCACTTACAT CTCCGCCC TAAA GGACGGAG TTTTTCGTGCTAGTG jhp0828 910844 - 910638 - | hypothetical protein jhp0829 911058 - 910912 - | hypothetical protein jhp0830 911673 - 911422 - | hypothetical protein jhp0831 911993 - 911721 - | hypothetical protein jhp0832 912294 - 912007 - | hypothetical protein TERM 830 912135 - 912153 + g 78 -3.8 -5.243 | TTTCGGTTAAATGGA GCGCTTTA AAT TGGAGTGC TTTTTTAATCCTTTG TERM 831 912736 - 912720 - R 79 -6.6 -4.67048 | overlap 912734 912735 GGAGTTCAAAACAAA GGGTTT AAATG AAACCC CCCCAAAAAGAGGGT babA 915024 - 912790 - | outer membrane protein - adhesin TERM 832 914489 - 914500 + g 72 -4.4 -4.7416 | TGGAGGATCTGGTAG GCTT CGTT AAGC TTTTTGAAATTTTCA jhp0834 916431 - 916021 - | hypothetical protein hypD 917510 - 916398 - | hydrogenase expression/formation protein hypC 917761 - 917525 - | hydrogenase expression/formation protein TERM 833 917772 - 917794 + r 75 -2.7 -5.60993 | CACATTAAAACGAAT GCGTGGA TTGGTAATT TTCACGC TTTTTTTCTAAAAGG hypB 918489 - 917761 - | hydrogenase expression/formation protein jhp0838 918730 - 918602 - | hypothetical protein jhp0839 919040 - 918741 - | hypothetical protein ackA 920251 - 919040 - | acetate kinase pta 921822 - 920263 - | phosphotransacetylase TERM 834 922829 - 922812 - g 70 -5.5 -4.31485 | TAATGAAAAAAAAAC GCCCCCT TTAA AGGAAGC TTTACAAATGAACGC jhp0842 922003 - 923577 + | hypothetical protein flgD 923628 - 924719 + | flagellar basal body rod modification protein TERM 835 925086 - 925067 - g 70 -2.8 -5.14563 | GGCTTTAGCAAAAAA CAGGATAA TTTC TTAACCCG TGCCGGCAATTTCGC flgE 924716 - 926533 + | flagellar hook protein FlgE TERM 836 926947 - 926961 + G 73 -2.2 -5.32944 | CTTGGGCACAAACAC TAATAG AGA TTATTA TTTTTTGATTATCAA jhp0845 926585 - 927166 + | hypothetical protein jhp0846 927176 - 928321 + | type II DNA modification (methyltransferase TERM 837 928671 - 928659 - g 74 -6.3 -4.36343 | opp_overlap 928659 928658 TAAGGAATTAAGAAA GCTTT TAG AAAGC ATTGTGGACACTAAA jhp0847 928330 - 930360 + | putative ATP-dependent helicase TERM 838 930447 - 930419 - f 84 -11.1 -3.14026 | opp_overlap 930416 TATAGCGATAGTTAA GCCCCTAAGAGCT AGG AACTCTTAAGAGC TTGTTTTTAATAAAG TERM 839 930736 - 930706 - f 72 -8.5 -3.02096 | gap 1, opp_overlap 930707, overlap 930699 GCTAGCAACCATAGA TTTTAGACTCTAGC TTGC GCTAGAGCC-AAAA TTTTAGTATAATGGC TERM 840 930707 - 930736 + F 82 -7.9 -4.371 | opp_overlap 930706 930699 CTAGCAACCATAGAT TTTAGACTCTAGC TTGC GCTAGAGCCAAAA TTTTAGTATAATGGC TERM 841 931043 - 931013 - f 72 -8.5 -3.02096 | gap 1, opp_overlap 931014, overlap 931006 GCTAGCAACCATAGA TTTTAGACTCTAGC TTGC GCTAGAGCC-AAAA TTTTAGTATAATGGC TERM 842 931014 - 931043 + F 82 -7.9 -4.371 | opp_overlap 931013 931006 CTAGCAACCATAGAT TTTAGACTCTAGC TTGC GCTAGAGCCAAAA TTTTAGTATAATGGC hopC 931524 - 933086 + | Outer membrane protein/porin hopB 933108 - 934691 + | Outer membrane protein/porin TERM 843 934721 - 934697 - T 70 -7.2 -3.60048 | opp_overlap 934698 934703, overlap 934696 934698 934703 CGCCTTCTAAAAAAG CTCAAAGCCT TTTAT AGGCTTTGAT TTAACCCTTTAAACC TERM 844 934720 - 934698 - T 80 -10.7 -2.75708 | opp_overlap 934698 934703, overlap 934697 934696 934703 GCCTTCTAAAAAAGC TCAAAGCCT TTTAT AGGCTTTGA TTTAACCCTTTAAAC TERM 845 934698 - 934720 + T 87 -10.7 -3.63968 | opp_overlap 934698 934697 934696 934703, overlap 934703 GCCTTCTAAAAAAGC TCAAAGCCT TTTAT AGGCTTTGA TTTAACCCTTTAAAC jhp0850 937020 - 935476 - | putative Outer membrane protein TERM 846 936576 - 936566 - G 76 -4.6 -5.0538 | overlap 936567 TCGTATCGTAAAAAA GCGG TAT CCAC CACATAAGGCCTTGC frpB_2 939805 - 937358 - | putative IRON-regulated outer membrane protein TERM 847 939255 - 939243 - G 79 -4.8 -5.01732 | opp_overlap 939243 939250 AAGTTGGTTAAAAAA GTGG CAGCC CCAC TTATGGCGTAGTCTT jhp0852 940412 - 939981 - | hypothetical protein carB 943674 - 940417 - | carbamoyl phosphate synthase large subunit TERM 848 940807 - 940797 - G 74 -4 -5.09685 | opp_overlap 940797, overlap 940791 940801 TAATAGAGACAAAAA TAAG CCC CTTA TTTTTAATGGGGTTA TERM 849 942729 - 942695 - G 77 -7.8 -4.28774 | TCATCTAAGCTAAAA CCCACCGCAAGCATGG TAG CCACTTTTGCAATGGG AAACCCGGTCGCTTT jhp0854 944466 - 943774 - | hypothetical protein TERM 850 945012 - 944990 - g 74 -4.8 -4.8083 | overlap 944993 GAATACGATGAAAAA CAATACCCCA CTT TGGTGTATGG GGTCAATCATTTTCT TERM 851 945009 - 944993 - g 71 -5.1 -4.49314 | overlap 944990 TACGATGAAAAACAA TACCCCA CTT TGGTGTA TGGGGTCAATCATTT TERM 852 945378 - 945364 - g 85 -4.2 -5.60993 | GTTTTTAGAAAAAAA GGCTCT CAA AGATCC GATCAATGATTTATT gap_1 944612 - 945610 + | glyceraldehyde 3-phosphate dehydrogenase TERM 853 947229 - 947215 - g 70 -3.6 -4.86033 | AAAGCCTTAGAAAAA GATTTA GCC CAAATC AAGCAATTAGCCAAC TERM 854 948171 - 948181 + G 73 -6.8 -4.21812 | opp_overlap 948169 AATCTATAATTTACA GGCT AAT AGCC TTATTTTCAATAACA TERM 855 948440 - 948428 - g 75 -7.7 -4.04174 | opp_overlap 948413, overlap 948413 948423 GCTTAGACAATCAAA GCGTT TTG AACGC GAATGGCACGAGTGC TERM 856 949015 - 949002 - g 76 -6.7 -4.44277 | CATGAAAATCCAAAA CGCTA CCTA TAGCG ATAATAACAACATCC jhp0856 945691 - 952890 + | putative vacuolating cytotoxin (VacA) paralog TERM 857 952918 - 952904 - f 72 -7.2 -3.79519 | opp_overlap 952899 AATGGTATTATTAAA CTTGTT TTT AACAAG CCTAATTCATAGCAG jhp0857 952943 - 954043 + | putative Outer membrane protein jhp0858 954319 - 954113 - | hypothetical protein TERM 858 954451 - 954432 - H 74 -2.2 -5.64321 | opp_overlap 954440, overlap 954435 954440 ACAATAAAATAAAAA CAATAAAA GCCC TTTTAGTG GCTTTCAAGTCAAGT TERM 859 954458 - 954435 - H 74 -5.4 -4.82111 | gap 1, opp_overlap 954440, overlap 954432 954440 ATAAAATAAAAACAA TAAAAGCC-CT TTT AGTGGCTTTCA AGTCAAGTTAAGTTT TERM 860 954453 - 954440 - H 71 -3.1 -5.18715 | gap 1, opp_overlap 954440, overlap 954432 954435 ATAAAAACAATAAAA GCC-CT TTT AGTGGC TTTCAAGTCAAGTTA TERM 861 954563 - 954549 - g 78 -4.2 -5.24531 | overlap 954530 954551 ATTGTTTAGAAAAAA TCCCCA ATG TGGGTA AAAAGTCCGCCTTTA TERM 862 954595 - 954609 + G 72 -8.6 -3.50447 | AATGGCGTATCATTT GGGTTT GGA AAACCC TTATCTGGCGCTTAA recR 954488 - 955069 + | recombination protein RecR truD 955066 - 956211 + | tRNA pseudouridine synthase D htpX 956198 - 957130 + | heat shock protein HtpX folE_1 957131 - 957343 + | GTP cyclohydrolase I TERM 863 957809 - 957827 + G 86 -4.5 -5.42862 | overlap 957811 AATTTTACTCCACTT GCGAGCA CCATT TGCTCCC TTTTTTTGGGAATAT folE 957598 - 958140 + | GTP cyclohydrolase I TERM 864 958363 - 958351 - g 70 -2.7 -5.02074 | TTAGTGGGTAAAAAA GATTA TTC TAACC AACAAACAGAATATT TERM 865 958886 - 958874 - g 79 -5.5 -4.95618 | AAGATGAAAAAGAAA GCGGT AAA ACCAC GCATTTAGACAGCGC ispA 958156 - 959067 + | geranyltranstransferase surE 959064 - 959867 + | stationary phase survival protein SurE TERM 866 960165 - 960175 + G 80 -8.2 -4.42653 | TTGTCCGTAATATCT CGGC TGT GCCG TTTTATCAATACAAT jhp0866 959864 - 960523 + | hypothetical protein jhp0867 960525 - 961127 + | hypothetical protein TERM 867 961643 - 961633 - g 71 -6.8 -3.97051 | opp_overlap 961633 AAATATCTTAAATAA CGCT AAA AGCG TGCATTTTAAATTCG jhp0868 961124 - 961879 + | hypothetical protein TERM 868 962266 - 962256 - g 73 -5.4 -4.56597 | GGGTTGGGTCAAAAA CTCT ATG AGAG CGTGGAGCGATACGC jhp0869 961971 - 962456 + | hypothetical protein TERM 869 962760 - 962741 - g 82 -6.4 -4.98857 | opp_overlap 962740, overlap 962735 AGCGAACGAGAAAAA CGGCTTTT TCAT AGAAGCCG GCTTTGAAACTGGGC jhp0870 962682 - 964688 + | putative outer membrane protein TERM 870 964725 - 964708 - T 72 -8.5 -3.0641 | AGAAAATATTAGAGA GCTTGAT TTCA ATCAAGC GATAATCTCATTGCG proP 966484 - 965126 - | proline/betaine transporter jhp0872 967591 - 966767 - | hypothetical protein jhp0873 968473 - 967598 - | hypothetical protein jhp0874 969258 - 968545 - | amino acid ABC transporter permease jhp0875 970015 - 969242 - | amino acid ABC transporter TERM 871 969695 - 969679 - G 70 -9.5 -2.61374 | opp_overlap 969672, overlap 969676 969675 969694 AATAGCTATAAGGCA GGCTTTT GTC AAAAGCC GCTTGGCGTTTTTTA alr 971214 - 970081 - | alanine racemase jhp0877 972573 - 971221 - | putative sodium/alanine symporter dadA 973846 - 972614 - | D-amino acid dehydrogenase jhp0879 974246 - 973869 - | hypothetical protein TERM 872 974603 - 974587 - H 83 -10.9 -2.83271 | overlap 974584 TCAGTGGTAGAAGCA CGACCTT GCC AAGGTCG GGGCCGCGGGTTCGA TERM 873 975073 - 975089 + H 78 -6.7 -4.4727 | overlap 975078 TGGCAAATTCATCTC TTCTTTT AAC AAAAGAA TTTTGTGAATATTGA jhp0880 975154 - 976635 + | hypothetical protein TERM 874 976774 - 976759 - f 85 -4.8 -5.66868 | opp_overlap 976757 AATCAATTAAAAAAA GTTATT CAAA AATAAC TATCAATTATAAAAA TERM 875 976821 - 976843 + F 79 -5.1 -5.14563 | overlap 976819 AAATCGTAACGCTTT TTAAAAAAA TACAT TTTTTTTAA TTTTTTAATCAACCA jhp0881 976960 - 977322 + | hypothetical protein TERM 876 977352 - 977389 + T 78 -6.7 -4.39696 | gap 1, opp_overlap 977372, overlap 977352 CATTCTTTAATACCC TTT-TGTCTTTTAAAATA TCA TCTTTTAAAAGACACAAA TTTGTTCCTTTAGCC TERM 877 977352 - 977388 + T 71 -8.3 -3.23094 | opp_overlap 977372, overlap 977352 CATTCTTTAATACCC TTTTGTCTTTTAAAATA TCA TCTTTTAAAAGACACAA ATTTGTTCCTTTAGC jhp0882 978747 - 977734 - | hypothetical protein jhp0883 979209 - 978757 - | SPOUT methyltransferase superfamily protein TERM 878 978844 - 978822 - G 80 -10 -3.7511 | opp_overlap 978821 GCTCGCACAAGACAA TTTTAGCCAC TTC ATGGCTAAAA GTCATCTCGCTCAAA TERM 879 979034 - 979046 + g 72 -3.4 -5.00884 | opp_overlap 979034 AAATACGGCTCAAAG GCTA GAGAG TAGC TTTTTTGAGCGAGCT accD 980092 - 979223 - | acetyl-CoA carboxylase subunit beta TERM 880 979767 - 979779 + g 78 -2.6 -5.38348 | CTGATCACTGAACTT GGGC GGTTA GTCC TTTTTTCGTATTTTT TERM 881 980681 - 980705 + G 95 -11.6 -5.02074 | opp_overlap 980681 GCTTGAAAGCTAAAA GCTTGGATTT AGAAA AAATCCAAGC TTTTTTCCGCACTCA TERM 882 980705 - 980681 - g 93 -11.6 -4.35524 | opp_overlap 980681 GCTTGAAAGCTAAAA GCTTGGATTT AGAAA AAATCCAAGC TTTTTTCCGCACTCA jhp0885 980173 - 980787 + | hypothetical protein jhp0886 980798 - 981454 + | hypothetical protein jhp0887 982023 - 981457 - | hypothetical protein TERM 883 982107 - 982117 + r 70 -4 -4.95211 | AACCAAGTAATTGCA TCAA CTT TTGA TTTTCTTGATTTTTT jhp0888 982720 - 982088 - | putative aldehyde dehydrogenase lgt 983571 - 982720 - | prolipoprotein diacylglyceryl transferase jhp0890 984308 - 983580 - | hypothetical protein waaA 985507 - 984326 - | 3-deoxy-D-manno-octulosonic-acid transferase jhp0892 986311 - 985508 - | hypothetical protein jhp0893 987052 - 986321 - | hypothetical protein TERM 884 987068 - 987086 + r 74 -7.4 -4.02532 | TTTAAGCCTTTGTTA GAGCGTTT TTT AGGCGCTC TTCTCTTTCTTCTTC glyQ 987950 - 987054 - | glycyl-tRNA synthetase subunit alpha gpsA 988902 - 987964 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase jhp0896 989871 - 989179 - | hypothetical protein jhp0897 990907 - 990227 - | hypothetical protein TERM 885 990610 - 990624 + g 79 -5.6 -5.00616 | CGCTAAACCCTCCCC CCACCG CAA CGATGG TTTTTTGGAACAAAC jhp0898 991638 - 990904 - | hypothetical protein jhp0899 993206 - 991704 - | hypothetical protein TERM 886 992013 - 992025 + g 77 -7.7 -4.15543 | overlap 992004 992024 TTTTTGGTTTCTTTC CCAAG AAG CTTGG TTTTCAAAATCTTTG TERM 887 992067 - 992084 + g 73 -7.1 -3.99805 | GCAAACCCCTGAAGT CAAAATG ACGC CATTTTG TTTCGCTTTTTCAAA TERM 888 992770 - 992786 + g 85 -5.9 -5.18355 | TCTTTAGCTCTGTTT GAAAGAC TCT GTTTTTC TTTTTGCTTTTTGAC jhp0900 994228 - 993206 - | hypothetical protein jhp0901 994788 - 994288 - | hypothetical protein TERM 889 995166 - 995144 - R 74 -9.2 -3.06183 | opp_overlap 995134 995151, overlap 995151 GTTATTGGCATTTAA TGAAAAACGC CAT GCGTTTTACA ACCCATGCGTTTGAG jhp0902 995443 - 995162 - | hypothetical protein czcA_1 998518 - 995459 - | putative cation efflux system protein TERM 890 998491 - 998458 - G 76 -6.7 -4.37507 | AAAACAAAACAAGAA TCGCGCCAACAATCA CGAT TATTCGCTGGCGCAA GGAAAATTCAATAAT czcB_1 999597 - 998518 - | putative cation efflux system protein TERM 891 999385 - 999401 + g 80 -8 -4.3467 | opp_overlap 999380 999385 CGCATCAAAACTCAA GCTCTG CACCA CAGAGC TTTTACTATCAAAAT TERM 892 999401 - 999385 - G 70 -8.7 -3.39521 | opp_overlap 999385, overlap 999380 CGCATCAAAACTCAA GCTCTGC ACC ACAGAGC TTTTACTATCAAAAT TERM 893 999475 - 999496 + g 100 -4.5 -5.88565 | gap 1, opp_overlap 999474 ATCTAATTTAATCAC CTT-TAACCC CAT GGGTTGCAAG TTTTTTTCTTCTAAA jhp0905 1000889 - 999594 - | hypothetical protein TERM 894 999752 - 999737 - G 72 -4.6 -4.7078 | opp_overlap 999737 TCAAGTATTGAAAAA GCCCGA TTTT TTGGGC TTCATAAGCGATGCG glyS 1002984 - 1000879 - | glycyl-tRNA synthetase subunit beta TERM 895 1001400 - 1001416 + g 79 -5.1 -5.09225 | opp_overlap 1001387 AGCTTTGATAAACGC CCACTTT TTC AAAGAGG TTTTTTAAATCCGCT TERM 896 1001977 - 1001961 - G 76 -3.6 -5.18371 | opp_overlap 1001968 TTTCATAAAAGAAAA CCGCAT CGCTC AAGCGG GCTTTTAAAACCTTT jhp0907 1003101 - 1004189 + | hypothetical protein pgm 1004202 - 1005677 + | phosphoglyceromutase gatC 1005692 - 1005973 + | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 897 1006026 - 1006006 - T 80 -7.7 -4.16279 | opp_overlap 1005995 CATATCAGGTTAAAA GCTTGATTT GTG AAATCAAAC AGACAGAAACAAAGC bioA 1007389 - 1006070 - | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 898 1006375 - 1006391 + g 73 -2.3 -5.26119 | ACTCGCTCAAAGCCT TGTTTTT TTC AATAACA TTTTCTTTTTCAAAA jhp0911 1007519 - 1008982 + | hypothetical protein TERM 899 1010450 - 1010435 - g 83 -6.2 -5.10461 | opp_overlap 1010435, overlap 1010429 CCCACTGAACAAAAA GGTTTT TTTC AAAACC TCTTGGATAAGATTT ftsA 1008998 - 1010479 + | septum formation protein ftsZ 1010607 - 1011764 + | cell division protein FtsZ jhp0914 1013325 - 1012090 - | hypothetical protein jhp0915 1014496 - 1013672 - | hypothetical protein TERM 900 1013740 - 1013750 + g 72 -4.6 -4.77157 | TTTCAATACGATTAG CGTC CAG GGCG TTTTTGATGCGTTCA TERM 901 1014194 - 1014160 - G 76 -7.2 -4.20868 | opp_overlap 1014161, overlap 1014161 GGTGTAAAATAATAA GGATTATCCCTCCAGC AAT GCTTGAAAGATAATCT TTTAAAGCCAACGCC TERM 902 1014193 - 1014161 - G 79 -10.7 -3.11798 | opp_overlap 1014161, overlap 1014160 GTGTAAAATAATAAG GATTATCCCTCCAGC AAT GCTTGAAAGATAATC TTTTAAAGCCAACGC TERM 903 1014360 - 1014340 - G 71 -6.2 -4.14013 | opp_overlap 1014340 CAAAATTCGCCAAAA TCTCATCC TTTTT GGATAAGA GTTTCATGGTTTTGT jhp0916 1014830 - 1014636 - | hypothetical protein TERM 904 1016376 - 1016388 + G 71 -4.9 -4.61482 | GCTAATTGCTATGTA TTTGT TCC ACAAA TTGTTTTTTGAAGCA virB4_2 1015042 - 1016469 + | DNA transfer protein virB4_3 1016457 - 1016879 + | DNA transfer protein topA_2 1016916 - 1018193 + | topoisomerase I jhp0920 1018568 - 1018849 + | hypothetical protein jhp0921 1018979 - 1019965 + | hypothetical protein jhp0922m 1019965 - 1021501 + | component of conjugal plasmid transfer system jhp0925 1022549 - 1021962 - | hypothetical protein TERM 905 1022063 - 1022074 + Gg 76 -4.4 -5.13354 | GTTCTTCTTCTTTTT CTTC TTTT GAAG TTTCTTTTTTATCAA TERM 906 1022103 - 1022124 + Gg 79 -6.7 -4.61527 | gap 1 AAGGGGAATAGGATT GGATTGTGAG AAG CTCA-AATCC TTTTTAAAAGCTTTT jhp0924 1021498 - 1022304 + | hypothetical protein jhp0926 1023572 - 1022556 - | hypothetical protein jhp0927 1023777 - 1025174 + | hypothetical protein TERM 907 1026273 - 1026257 - g 74 -3.7 -5.01732 | overlap 1026259 AATCGCCTTAAAAAA TCCATTG AAA CAACGAA CGAAACGCTAAACGC TERM 908 1027378 - 1027360 - g 72 -3.1 -5.08169 | gap 1 ACACATCGCAAAAAA CGCCACCT TTTT AGGCG-CG ATAAGACTGCCTAAT TERM 909 1029159 - 1029141 - g 76 -4.6 -5.05153 | overlap 1029143 ACCCTAAAAAAGAAA TATTCATC ACT GATGAAGA GCAAAGCAATCTCGC TERM 910 1029157 - 1029143 - g 73 -7.2 -4.13692 | overlap 1029141 CCTAAAAAAGAAATA TTCATC ACT GATGAA GAGCAAAGCAATCTC jhp0928 1025324 - 1032019 + | hypothetical protein TERM 911 1032083 - 1032059 - g 70 -3 -5.01732 | gap 1, overlap 1032047 1032046 1032063 AACTCCCTGAAAAAA TCAA-GGAATT AGAA AACTCCATTGA AATCACGAAAAAAAA jhp0929 1032025 - 1032477 + | hypothetical protein TERM 912 1032522 - 1032536 + F 74 -7.8 -3.79906 | opp_overlap 1032521 TAAATGGCATTAAGT GGCGTG ATT TACGCC TTATTATGCGAGTAG jhp0930 1032591 - 1032833 + | hypothetical protein TERM 913 1033184 - 1033200 + G 70 -3.6 -4.86731 | opp_overlap 1033184 AAGTGGGATTAACAA GGGCTT ACAAA ACGCCC TTTTATTTGAAAACA TERM 914 1033601 - 1033589 - g 72 -3.4 -5.13521 | AAAGGATTTAAAAAA CTCT GTTGT AGAG ACTAAACCTAAAAAG topA_3 1032846 - 1034906 + | topoisomerase I TERM 915 1035050 - 1035064 + GF 77 -8.6 -3.73224 | AGGCACAGGAGATTG GCATAG TAG CTATGC TTTAATGGAGAATGC jhp0932 1034961 - 1035431 + | hypothetical protein TERM 916 1035676 - 1035662 - gT 75 -2.8 -5.22312 | overlap 1035664 ATTCATATTAAAAAA GACACT GAT AGTGTG GGGCGTTATATGGTG TERM 917 1036200 - 1036177 - gT 78 -6.7 -4.43309 | CAATTCTAATGAAAA CACCTACAC ACCTAA GCGTAGGCG ATAGTAACCTTATTG jhp0933 1035401 - 1036204 + | hypothetical protein jhp0934 1037296 - 1036277 - | hypothetical protein TERM 918 1036978 - 1036988 + g 70 -5.4 -4.43681 | GTAATCTTTCTAGTT GCTT TAA AAGC TTTTGCTCTTGGGTG jhp0935 1037885 - 1037343 - | hypothetical protein TERM 919 1037507 - 1037526 + g 79 -5.8 -4.93877 | AGCTTTCTAAAAGTG TAATCCTA TCGC TAGGGTTA TTTTCTTTAATAAAC jhp0936 1038083 - 1038616 + | hypothetical protein jhp0937 1038613 - 1039878 + | hypothetical protein TERM 920 1039910 - 1039934 + G 72 -8.7 -3.53012 | AAAATTAGTTTTTAG CATGCTTTTAT GTT GTAAAAGCGTG TTTGCAGAGGGGGAA jhp0938 1039890 - 1041140 + | hypothetical protein jhp0939 1042158 - 1041145 - | hypothetical protein jhp0940 1042390 - 1043367 + | hypothetical protein jhp0941 1044679 - 1043684 - | integrase/recombinase (XERCD family) TERM 921 1044302 - 1044317 + g 73 -5.4 -4.59773 | opp_overlap 1044311, overlap 1044300 TAAGCTTTCTTTGGT CTTAGC AAAG GCTAGG TTTTTAAGCGTAAAA TERM 922 1047702 - 1047689 - g 90 -5.3 -5.69262 | CTAGAAAAAGAAAAA GCTAA AGAA TTAGC CAAACAACAAGCTAA jhp0942 1045778 - 1047811 + | hypothetical protein TERM 923 1047851 - 1047881 + T 80 -7.7 -4.20868 | opp_overlap 1047851 1047858, overlap 1047858 AATGTTCTTTATAAA GAATATACCCTTT GATTA AAGGGGTTTATTC TTGTTCTTTTCACAA TERM 924 1047873 - 1047858 - T 71 -7.6 -3.38699 | opp_overlap 1047851 1047858, overlap 1047851 TTTATAAAGAATATA CCCTTT GATT AAAGGG GTTTATTCTTGTTCT TERM 925 1048009 - 1047998 - T 74 -2.2 -5.63236 | opp_overlap 1047999 ACCTAAAAACAAAAA CGCT TTAA AACG CCTTGTAGAGCTTAA TERM 926 1048329 - 1048341 + T 79 -3.4 -5.70761 | CTAACATGTCATTGA TAGG TAATT CCTA TTTTTCTTTTATTTT jhp0943 1048561 - 1048376 - | hypothetical protein TERM 927 1049083 - 1049067 - H 71 -8.1 -3.36878 | GCGATTTAGCGATAA GGAATTT AAA AAATTCC TAAAAGACAGAGCTA jhp0944 1049107 - 1049874 + | hypothetical protein TERM 928 1050739 - 1050763 + GF 88 -9.3 -4.30576 | overlap 1050736 GTGGTGGGAGTTTAG GGAATGGGGGG CTT TTCCCTATTCC TTTTGGTAATGGAGA jhp0945 1049874 - 1051880 + | hypothetical protein jhp0946 1051673 - 1052110 + | hypothetical protein TERM 929 1052819 - 1052807 - g 78 -2.7 -5.41746 | AAGCGGCTAAAAAAA TCCAA TTA TTAGA CAGCCAAATGACTTT jhp0947 1052137 - 1053537 + | hypothetical protein jhp0948 1053588 - 1053866 + | hypothetical protein jhp0949 1053868 - 1055130 + | hypothetical protein TERM 930 1055329 - 1055343 + G 70 -5.8 -4.41348 | opp_overlap 1055329 TCATCACGCCTAAAA TTTCTA ACT TAGAAA TTTATTTACGCAACG jhp0950 1055202 - 1055885 + | hypothetical protein jhp0951 1057038 - 1055965 - | integrase/recombinase (XERCD family) TERM 931 1057366 - 1057318 - H 91 -12 -3.47349 | opp_overlap 1057318 1057319 1057365, overlap 1057319 1057324 TCTCTAAAGGCACAA GGAAAAGGGAGCTAAAGATAAA GTGCA TTTACCCTTAACTCCCCTTTCT CTTTAATAGGGAGCT TERM 932 1057365 - 1057319 - H 100 -15.5 -2.68088 | opp_overlap 1057318 1057319, overlap 1057318 1057324 CTCTAAAGGCACAAG GAAAAGGGAGCTAAAGATAAA GTGCA TTTACCCTTAACTCCCCTTTC TCTTTAATAGGGAGC TERM 933 1057360 - 1057324 - H 100 -11.8 -4.50661 | opp_overlap 1057319 1057318, overlap 1057319 1057318 AAGGCACAAGGAAAA GGGAGCTAAAGATAAA GTGCA TTTACCCTTAACTCCC CTTTCTCTTTAATAG TERM 934 1059930 - 1059942 + H 70 -6.2 -4.2354 | AGGTTCTATTTCACT CCGC TCACT GCGG TTCTTTTCACCTTTC TERM 935 1060096 - 1060078 - H 73 -8.9 -2.80344 | overlap 1060077 CTGCTACCTAAGAAC GCCTTGT CGCAT ACAAGGC TATCACTTTCTATGG jhp0952 1061075 - 1061266 + | hypothetical protein jhp0953 1061498 - 1061274 - | hypothetical protein jhp0954 1061542 - 1061982 + | hypothetical protein TERM 936 1062010 - 1061984 - f 79 -8 -4.06851 | opp_overlap 1061983 1061990 AAAGAAAAAGTTAAA GGATTGTGGGTT TTT AACCCATAAACC CATTCATTATTAAGA jhp0955 1062036 - 1062689 + | hypothetical protein TERM 937 1063069 - 1063042 - g 75 -7.8 -4.13304 | gap 1 AAATCACGCCTAAAA CG-CGCACCTTGT TAG ACAAAATGCGGCG CTTAAACGCTTTGAG jhp0956 1062798 - 1063283 + | hypothetical protein jhp0957 1063271 - 1063873 + | hypothetical protein jhp0958 1064021 - 1064176 + | hypothetical protein jhp0959 1064262 - 1064918 + | hypothetical protein TERM 938 1064922 - 1064940 + F 83 -10.3 -3.26783 | opp_overlap 1064920, overlap 1064921 TTAGAAAACTAACCG CCCCCAA CTCTT TTGGGGG TCTCCTTTTTTAATC jhp0960 1065063 - 1065281 + | hypothetical protein TERM 939 1065389 - 1065401 + G 73 -5.5 -4.48987 | opp_overlap 1065387 1065389 TGAAAGATAAAATCA GGCAG GTT TTGCC TTTTCATTCTGGCGA jhp0961 1065283 - 1065468 + | hypothetical protein TERM 940 1065532 - 1065508 - T 84 -6.5 -5.23765 | opp_overlap 1065508 1065530 CAAACAATATAAAAA CCCAACAAAAA GCG TTTTTAGTGGG TTTTTGCGTTTAAGA TERM 941 1065508 - 1065532 + T 70 -4.3 -4.81249 | opp_overlap 1065508, overlap 1065530 CAAACAATATAAAAA CCCAACAAAAA GCG TTTTTAGTGGG TTTTTGCGTTTAAGA speA 1067389 - 1065542 - | arginine decarboxylase jhp0963 1068572 - 1067403 - | putative polysaccharide biosynthesis protein jhp0964 1069005 - 1068577 - | hypothetical protein TERM 942 1068879 - 1068907 + g 100 -6.7 -5.60993 | CATACACCATGTTTT CATTGCCCTTG AAACGGA CATGGGCGATG TTTTTTTCTAAAACG jhp0965 1069807 - 1069022 - | hypothetical protein TERM 943 1069380 - 1069392 + g 70 -2.6 -5.02502 | opp_overlap 1069370 TACAAGGCTTTTAAA GCCT CTAGC GGGC TTTTTCTGTGGTATA jhp0966 1070818 - 1069811 - | hypothetical protein TERM 944 1070388 - 1070376 - G 84 -7.7 -4.77173 | opp_overlap 1070375 1070376 TGCTTATAAAACAAA TGGAG CCA CTCCA ATTTATCAAAAAAGG metG 1072789 - 1070819 - | methionyl-tRNA synthetase TERM 945 1072015 - 1072035 + g 82 -6.1 -4.84311 | overlap 1072017 1072024 TACCCACAATATGCC TAGCGCGTT CAA AATGCGCCA TTTTATTGTCTAAAC TERM 946 1073632 - 1073644 + G 76 -9.1 -3.75169 | CCAGGATTTAGACGG GCGGT TAT ACCGC TTTGATAAGGTGGTG TERM 947 1073683 - 1073701 + G 70 -3.1 -4.86731 | CATGTTTGAGCATGT GGGTAAG GATAA TTTGCCC TTTTATTTCAAAAAA cfa 1072958 - 1074127 + | cyclopocyclopropane fatty acid synthase jhp0969 1076008 - 1074137 - | hypothetical protein TERM 948 1075227 - 1075217 - G 71 -6.8 -3.97709 | ACGATCTAATAATAA GGCT AAA AGCC AAGTGATCAATTTCC TERM 949 1075562 - 1075540 - G 80 -7.8 -4.35524 | overlap 1075545 GTCCTAAACGCAAAA GAAAAGCATC GCT GATACTTTCC ACATCTTTTTGTTCG TERM 950 1075557 - 1075545 - G 74 -4.1 -5.14698 | overlap 1075540 AAACGCAAAAGAAAA GCATC GCT GATAC TTTCCACATCTTTTT TERM 951 1076427 - 1076444 + r 77 -4.1 -5.37345 | GTGAGATCCATGCTT TAGGGAT TTCT AACCCTA TTTTTTGTAATTGGG jhp0970 1076671 - 1076573 - | hypothetical protein jhp0971 1078085 - 1077336 - | putative paralog of HpaA TERM 952 1077511 - 1077496 - G 74 -6.2 -4.42653 | ATCCTATGCACAAAA GTTTTG GGGA CAAAAC CTCCAGAATTGGTAC TERM 953 1077666 - 1077678 + g 70 -9.1 -3.24633 | overlap 1077666 CACTTTTTCTTCACT GAGCG CAT CGCTC TCTTCTACAATATCT guaA 1079695 - 1078169 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 954 1078252 - 1078262 + g 70 -5.4 -4.36914 | opp_overlap 1078261 CTTCATTAGTGATGC GGTT AGA AACC TTTTCTAAAAAAGAA TERM 955 1079180 - 1079155 - G 82 -7.7 -4.55128 | AGCCGCAAACTAAAA GGGCAAAATTT TCTA AAATCTTACCC CCTTCTTCGCTTTGA jhp0973 1080186 - 1079692 - | hypothetical protein TERM 956 1079916 - 1079902 - G 72 -3.6 -5.09204 | AGATTGGAATAAAAA CTCTTT ATG AAAAAG TGCTTTTGCGGGCAT jhp0974 1082756 - 1080366 - | putative S/N-oxide reductase jhp0975 1083450 - 1082860 - | hypothetical protein jhp0976 1084798 - 1083476 - | nifS-like protein TERM 957 1083806 - 1083821 + g 72 -3.2 -5.14682 | opp_overlap 1083806 1083808 TAAGCCATACACAAG CACCCT TAAA AGGTTG TTTTCTTTCTTATGG TERM 958 1084392 - 1084424 + g 76 -3.5 -5.30199 | opp_overlap 1084398 CCTACAATCACACGC TTTAAAGCCATATCT TTC AAATACGGCTCTAAA TTTTTCTTCGTTTTT jhp0977 1085131 - 1084817 - | HIT family protein TERM 959 1086157 - 1086173 + G 71 -9.5 -2.76315 | overlap 1086156 1086159 AATCAATGATTTACG CAGTTTC TTT GAAACTG ATTTGAGAGTGTTGG pheS 1085213 - 1086199 + | phenylalanyl-tRNA synthetase subunit alpha TERM 960 1086385 - 1086369 - g 80 -6.5 -4.83169 | opp_overlap 1086369 AGCCCCCCATAAAAA CGCCGAA AAA CTCAGCG TGTGTCAAGTGGATG TERM 961 1088323 - 1088301 - g 70 -7.8 -3.68674 | AAAAGCCCTAAAAGA CGCTCAAATC CCT AATTTAAGCG AAATTCTACCCCTTG pheT 1086199 - 1088493 + | phenylalanyl-tRNA synthetase subunit beta TERM 962 1089009 - 1088991 - g 71 -6 -4.2803 | CAGCTCAAGTCAAAA GCGCTT TTATTTT AAGCGC CTTACAAGCTCAAGG aroA 1088513 - 1089802 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 963 1089944 - 1089932 - g 87 -4.9 -5.40072 | TCGTTTGGAAAAAAA TTTCA ATG TGAAA ATTGAAGAAGATCCT ispH 1089792 - 1090616 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 964 1090697 - 1090687 - f 80 -5.4 -5.15969 | overlap 1090695 TTGTAAGTCAAAAAA GGAT ACA ATCC CCCTAAGGAATTTTA rpsA 1090738 - 1092396 + | 30S ribosomal protein S1 jhp0983 1092425 - 1092937 + | hypothetical protein TERM 965 1093090 - 1093073 - g 79 -5.5 -4.83615 | overlap 1093058 1093075 GAGCTTTTAGAAAAA CTCATCC CCAT GGATGCG CTCATCACTCGCAGC serA 1092953 - 1094527 + | D-3-phosphoglycerate dehydrogenase jhp0985 1094537 - 1096387 + | hypothetical protein TERM 966 1096532 - 1096517 - g 70 -3.2 -5.00616 | overlap 1096518 GGCTGTTTCAAAAAA CGCTTC CCCA GAAGCT ATCCAACATTACTAC TERM 967 1096989 - 1096976 - g 79 -6.7 -4.49556 | opp_overlap 1096976 TTTTGACCAAATAAA GAACG CGAG CGTTC TTTCAATGGGCATGA TERM 968 1097035 - 1097059 + G 89 -5.7 -5.4505 | overlap 1097030 TAGCGATTGCTTGCG GGGCGAATCTT TTA AGGATTGGCTC TTTTTTGTTCAAAGA jhp0986 1096410 - 1097078 + | hypothetical protein jhp0987 1097080 - 1097838 + | hypothetical protein cheV_3 1097840 - 1098778 + | putative chemotaxis protein TERM 969 1100078 - 1100066 - g 77 -7.7 -4.24183 | overlap 1100077 TAGAAGAAAGAAGAA GGCTT AAC AAGCC TGAAACCGGTAAGGT cheA 1098835 - 1101282 + | histidine kinase cheW 1101279 - 1101776 + | histidine kinase - MCP coupling protein TERM 970 1101851 - 1101834 - T 71 -5.6 -4.7373 | opp_overlap 1101833 1101834 TTATTCCATTAAAAA GCTTGA TTTTAG TCAAGC GTTTCTTATAATGCA TERM 971 1101959 - 1101969 + T 70 -4 -5.02074 | TTATTTTTTAGTTTT TGTT GCT AACA TTTTTTAACAAGTGG tpx 1102536 - 1102036 - | thiol peroxidase TERM 972 1103168 - 1103155 - g 74 -3.9 -5.14477 | TAGACACTCAAAAAA TTGAA ATCA TTCAA ACGAGCAACGCTCAA sodF 1102758 - 1103399 + | iron-dependent superoxide dismutase TERM 973 1103410 - 1103444 + F 91 -8.1 -5.08824 | gap 1, opp_overlap 1103426, overlap 1103414 1103416 CTTAAGCGTTATTTT GATAGGGTGGTTTAAA GGTT TTTAAACCACGCT-TC TTTTTTGAATGAAAG TERM 974 1103414 - 1103441 + F 93 -10 -4.64763 | opp_overlap 1103426, overlap 1103410 1103416 AGCGTTATTTTGATA GGGTGGTTTAAA GGTT TTTAAACCACGC TTCTTTTTTGAATGA TERM 975 1103416 - 1103439 + F 82 -11.2 -2.61579 | opp_overlap 1103426, overlap 1103414 1103410 CGTTATTTTGATAGG GTGGTTTAAA GGTT TTTAAACCAC GCTTCTTTTTTGAAT TERM 976 1103658 - 1103671 + G 76 -3.1 -5.25803 | TTTATGATTTGGGCT GTTCT ACCG GGAAC TTTTTTATCGCGCTT TERM 977 1103778 - 1103765 - g 70 -2.5 -5.11112 | AAAGCGCAAGAAAAA TTAAA AGAT TTTAA CAATGTCCGTTTTGA jhp0993 1103453 - 1104184 + | hypothetical protein priA 1106077 - 1104218 - | primosome assembly protein PriA TERM 978 1104433 - 1104449 + g 90 -8.7 -4.93177 | TTTGAGAGGCTTCTA GGCTCAA TTG TTGGGCC TTTTCTTCGTTTTTA TERM 979 1105212 - 1105226 + g 74 -9.2 -3.53811 | overlap 1105213 ATGTTTTTTTGCGTG GGGGTG TAG CGCCCC TTTAGGCGCACTAAA TERM 980 1105482 - 1105492 + g 70 -2.6 -5.01676 | TCTTGCGAATAAAGC TTTT CTA AAAA TTGTTTTTTTTGATT jhp0995 1106298 - 1106062 - | hypothetical protein jhp0996 1106538 - 1106311 - | hypothetical protein jhp0997 1106739 - 1107485 + | hypothetical protein jhp0998 1108285 - 1107761 - | hypothetical protein jhp0999 1108465 - 1109688 + | putative zinc-metallo protease hemG 1109685 - 1110515 + | protoporphyrinogen oxidase TERM 981 1110921 - 1110964 + G 71 -6.7 -4.11216 | opp_overlap 1110921 CAAGTGTTGAAAAAT TCGCTCACCACTTTGGC TATGGGGGGC GCTAAGGGGGGGAGCGA TTTTGACCCTAAAGA TERM 982 1111507 - 1111490 - g 75 -5.5 -4.67608 | opp_overlap 1111502 1111506, overlap 1111493 CACCCCAACAGAAAA TTACCCC AAAG GGGGGAA TGCCATATGGCATGT TERM 983 1111564 - 1111590 + G 71 -6.6 -3.98661 | opp_overlap 1111563 1111560 1111564 1111567, overlap 1111565 1111567 CGACTGAGAATGAAT TGAGCGTTTTAG ACG CTAAAACCCTCC TTTCTAATGGGTGTA TERM 984 1111565 - 1111589 + G 75 -10.1 -2.98714 | opp_overlap 1111563 1111564 1111560 1111567, overlap 1111564 1111567 GACTGAGAATGAATT GAGCGTTTTAG ACG CTAAAACCCTC CTTTCTAATGGGTGT gdhA 1110582 - 1111928 + | glutamate dehydrogenase fucU 1113251 - 1111942 - | Alpha-(1,3)-fucosyltransferase TERM 985 1112275 - 1112241 - G 73 -7.4 -4.07568 | opp_overlap 1112229 1112240, overlap 1112242 TGTCGTTTTCTAAAA TCGTTTTAAAAAAATC TAG GATTTTTTTAAAACTC AAATTTTGGTAAAAG TERM 986 1112274 - 1112242 - G 78 -10.9 -3.04398 | opp_overlap 1112229 1112240, overlap 1112241 GTCGTTTTCTAAAAT CGTTTTAAAAAAATC TAG GATTTTTTTAAAACT CAAATTTTGGTAAAA TERM 987 1113153 - 1113164 + g 73 -5.8 -4.56597 | opp_overlap 1113152 CGCCTCCCCACCAAT TCGC CACA GCGA TTTTTAGGGGGGGGG TERM 988 1113304 - 1113286 - R 72 -7.4 -3.85909 | overlap 1113281 TTAGGCAAACTCAAA TGGCGTTT GAA ATACGCCA AGATCACGAGAGCGA jhp1003 1116071 - 1113261 - | putative cytochrome C-type biogenesis protein TERM 989 1114538 - 1114560 + g 79 -3.5 -5.42514 | GCGCATTGGGGGATT TTTGATTGA CTTCT TCAACCAAA TTTTTTAATTTATAC TERM 990 1114829 - 1114841 + g 77 -7.7 -4.24326 | overlap 1114832 AATCCTGGACTTGAA GCCTT TGA AAGGC TTTTAAATGGTCTTT TERM 991 1115256 - 1115246 - G 70 -5.4 -4.3208 | CTTCATAATCTAAAA CATG GTT CATG AAAATCCTATAAGGT TERM 992 1115786 - 1115772 - G 72 -3.5 -5.0538 | gap 1 TTCCACTCCAAAAAA GC-GCG TGAT CGCTGC CCCTAAAATGATGAA jhp1004 1116752 - 1116081 - | hypothetical protein hemH 1117833 - 1116826 - | ferrochelatase jhp1006 1117889 - 1118320 + | hypothetical protein TERM 993 1118518 - 1118492 - g 74 -3.7 -5.07107 | overlap 1118495 GAAATCGCTAAAAAA CACGCCC TTTTAAGGCTAGT GGGCGTG CAACCATTAGAGATT jhp1007 1118321 - 1119001 + | hypothetical protein jhp1008 1121340 - 1119085 - | putative outer membrane protein TERM 994 1119968 - 1119982 + g 71 -7 -4.0802 | TGCCCGCCCTCACAG CGTGCC TCT GGCCCG TTTCCTTCTTGGCAT TERM 995 1121330 - 1121316 - G 72 -4.3 -4.73432 | TTAAAGACAAACAAA TCGTT TTACT AACGA GCCTTAGCATGATAT dcd 1122075 - 1121509 - | deoxycytidine triphosphate deaminase accB 1122205 - 1122690 + | biotin carboxyl carrier protein TERM 996 1123788 - 1123767 - g 74 -3.7 -5.09173 | GAAGATCCTAAAAAA TTCTACCCA AGCC CGGGCAAAA TCACCGAATGGATCG accC 1122696 - 1124063 + | biotin carboxylase jhp1012 1124156 - 1125118 + | putative type II DNA modification enzyme (methyltransferase) jhp1013 1125118 - 1125666 + | hypothetical protein jhp1014 1125760 - 1126365 + | hypothetical protein jhp1015 1126362 - 1127498 + | spore coat polysaccharide biosynthesis protein C nrdF 1127804 - 1128829 + | ribonucleotide-diphosphate reductase subunit beta pcm 1128839 - 1129468 + | protein-L-isoaspartate O-methyltransferase jhp1018 1129490 - 1130527 + | hypothetical protein TERM 997 1130640 - 1130626 - g 73 -5.6 -4.52142 | AGGATAAAATAGAAA GCGCTT TAA ACGCGC TAGGGATTAAAAGCG TERM 998 1130842 - 1130813 - g 90 -3.5 -5.88565 | opp_overlap 1130831 GCTAGAAGAAAAAAA CTTCCATGCGCGT TTTG ACGCTCAAAAAAG AGCGTATCGTTACCT truA 1130529 - 1131257 + | tRNA pseudouridine synthase A galE 1132285 - 1131251 - | UDP-glucose 4-epimerase jhp1022 1133200 - 1134735 + | putative Outer membrane protein TERM 999 1134881 - 1134895 + G 77 -8.6 -3.92625 | ACAAAAATTGCAGCT CGCTTA CCC TAAGCG TTTCATTCCCCTGTG TERM 1000 1135213 - 1135223 + G 71 -4 -4.96468 | overlap 1135211 1135217 GAGCGAGCAAGGCGT TTGT GAA ACAA TTTTCTTTAAATTTG jhp1023 1134753 - 1135505 + | short chain alcohol dehydrogenase jhp1024 1136588 - 1135716 - | hypothetical protein TERM 1001 1136566 - 1136555 - G 73 -5.8 -4.5442 | opp_overlap 1136555 1136554 CGCCCAAGCACAAAA CCCT AAAA AGGG ATTTTTTGACATTTT eda 1137284 - 1136658 - | 2-keto-3-deoxy-6-phosphogluconate aldolase edd 1139129 - 1137303 - | phosphogluconate dehydratase TERM 1002 1138276 - 1138288 + g 74 -4.1 -5.1675 | ATTAAGCCTATAAGA GCGTT AAG AATGC TTTTTTCATCAATGA zwf 1139195 - 1140472 + | glucose-6-phosphate 1-dehydrogenase jhp1028 1140483 - 1141166 + | putative dehydrogenase glk 1141153 - 1142163 + | glucokinase jhp1030 1142333 - 1143385 + | zinc-dependent alcohol dehydrogenase jhp1031 1144569 - 1143388 - | putative lipopolysaccharide biosynthesis protein TERM 1003 1143659 - 1143672 + g 70 -3.1 -4.84761 | overlap 1143649 TAAGCGGCAATGCCA TGGTA GTAA TGCCA TTTTTCTCCACCTAT jhp1032 1145905 - 1144709 - | putative lipopolysaccharide biosynthesis protein TERM 1004 1145997 - 1146019 + H 72 -5 -4.90321 | TGGTTTTTATGCTGT TTTTAAAGCA AAT TGATTTAAAA TTTTATCTTATTTTT jhp1033 1146080 - 1147387 + | hypothetical protein jhp1034 1148056 - 1147394 - | putative Outer membrane protein porG 1148339 - 1148899 + | pyruvate flavodoxin oxidoreductase subunit gamma porD 1148915 - 1149307 + | pyruvate flavodoxin oxidoreductase subunit delta porA 1149317 - 1150540 + | pyruvate flavodoxin oxidoreductase subunit alpha porB 1150553 - 1151497 + | ferrodoxin oxidoreductase beta subunit purB 1151605 - 1152927 + | adenylosuccinate lyase TERM 1005 1152935 - 1152947 + F 72 -3.5 -5.25805 | overlap 1152940 TTGGATAAGGTGCGT TTTTA GCC TAAAA TTTTTTGGCTTTGTT TERM 1006 1153048 - 1153031 - f 85 -4.9 -5.66338 | AAATATAATAAAAAA GCTTGAT TTTA ATCAAAC GATAACCTCTTAAAA jhp1040 1153226 - 1154059 + | putative Outer membrane protein uvrB 1156060 - 1154084 - | excinuclease ABC subunit B TERM 1007 1154814 - 1154803 - G 73 -7.2 -4.07687 | ATTTGGGGTCTAAAA GCCC TGTA GGGC GAATGATTTGCTCAG TERM 1008 1155759 - 1155747 - G 84 -7.7 -4.67607 | TTTTCAATAAATAAA TCCCT CCT AGGGA TATAGCTCTCAGGCT TERM 1009 1156139 - 1156128 - R 77 -3 -5.58209 | TCAAACTCAAAAAAA TCAA TGTT TTGA TAATGATCGGTCTTT jhp1042 1156912 - 1156109 - | hypothetical protein jhp1043 1157292 - 1156909 - | hypothetical protein TERM 1010 1157351 - 1157365 + r 83 -4.3 -5.56263 | TTTCATTTTTTACTC CTTGA CTTTT TCAAG TTTTTGTTTTATAGT jhp1044 1160900 - 1157436 - | hypothetical protein TERM 1011 1158152 - 1158170 + g 83 -6 -5.04325 | overlap 1158166 TTTCATAACCTGTTA TCACCCAA TGA TTAGGTGA TTTTTCTCCTTTCCA TERM 1012 1159254 - 1159274 + g 72 -4.7 -4.82863 | opp_overlap 1159255, overlap 1159255 GATGTTTTTTAATGA ATAGATGCT ATC AGCGTCTAA TTTCTTTTCTAATTC jhp1045 1162089 - 1161319 - | hypothetical protein ggt 1164036 - 1162333 - | gamma-glutamyltranspeptidase flgK 1166044 - 1164224 - | flagellar hook-associated protein FlgK jhp1048 1166480 - 1166046 - | hypothetical protein jhp1049 1167311 - 1166559 - | hypothetical protein jhp1050 1168269 - 1167304 - | type II DNA modification (methyltransferase jhp1051 1168615 - 1168412 - | hypothetical protein slyD 1169482 - 1168925 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 1013 1169280 - 1169260 - G 71 -7.5 -3.86194 | overlap 1169268 AACCGCTTTCATAAA CCCCATAAG CCT CCTCTGGGG CGATAACAATCTCTT jhp1053 1170464 - 1169469 - | hypothetical protein TERM 1014 1170174 - 1170203 + g 90 -11.5 -3.9461 | CGTGTTAGCTTGCAC TTCTTGCGAGGCT TTTA AGGCTCGCAAGGA TTCTTCTTGGGAAAG jhp1054 1171011 - 1170472 - | putative Outer membrane protein tolB 1172331 - 1171078 - | translocation protein TolB jhp1056 1173119 - 1172328 - | hypothetical protein exbD_1 1173539 - 1173138 - | biopolymer transport protein exbB_1 1174160 - 1173591 - | biopolymer transport protein TERM 1015 1174155 - 1174145 - G 81 -5.4 -5.0666 | TATTGAAAAAATAAA CGAT TGA ATCG AACATGATTATCCCC atpC 1174542 - 1174171 - | F0F1 ATP synthase subunit epsilon atpD 1175962 - 1174553 - | F0F1 ATP synthase subunit beta atpG 1176892 - 1175987 - | F0F1 ATP synthase subunit gamma TERM 1016 1176084 - 1176067 - G 78 -7.1 -4.35483 | opp_overlap 1176066 1176063 1176069 CTTTATTATAAGAAA TGGTTAA AGTT TTAACCA AATCTTTAGCGTTAT TERM 1017 1176696 - 1176707 + g 70 -3 -5.10154 | overlap 1176686 TTGCTTTGAATGTCT TCAA TCCC TTGA TTTTTCATTTTGGAT atpA 1178418 - 1176907 - | F0F1 ATP synthase subunit alpha atpH 1178983 - 1178441 - | F0F1 ATP synthase subunit delta atpF 1179499 - 1178984 - | F0F1 ATP synthase subunit B atpX 1179937 - 1179503 - | F0F1 ATP synthase subunit B' jhp1066 1180914 - 1180042 - | plasmid replication-partition related protein jhp1067 1181711 - 1180917 - | hypothetical protein TERM 1018 1181088 - 1181076 - G 70 -2.7 -5.055 | TGAATCTCTAAAAAA TTCTG AGT CAAAA TACTTAAACAATTCC jhp1068 1182352 - 1181714 - | biotin--protein ligase TERM 1019 1182072 - 1182082 + g 73 -6.8 -4.17523 | opp_overlap 1182061, overlap 1182061 TTAAGCCAGGTTTGA GAGC CTA GCTC TTTTAAAACTTCTTT fmt 1183266 - 1182349 - | methionyl-tRNA formyltransferase TERM 1020 1182644 - 1182656 + g 79 -3.3 -5.40072 | opp_overlap 1182644 AAACCCACTAACCCA TCGGC CTT GGCGA TTTTTTTACAAAAAC jhp1070 1185569 - 1183290 - | hypothetical protein TERM 1021 1184771 - 1184782 + g 70 -3 -5.16151 | overlap 1184764 GAGCTACCCAATCCT CATT GCTT AATG TTTTTATTAAATTTG jhp1071 1186905 - 1185604 - | hypothetical protein TERM 1022 1186356 - 1186369 + g 82 -3.9 -5.52384 | overlap 1186355 GCTCTTCTTGCTGCT TGAAT TTCA ATTCA TTTTTTTCATGCAAG jhp1072 1187115 - 1187408 + | hypothetical protein TERM 1023 1187657 - 1187647 - T 71 -5.4 -4.58698 | GCAAATCAAAAACAA GCAA GAA TTGC AATCATGAGATAAAG TERM 1024 1187946 - 1187925 - T 74 -2.3 -5.52909 | TAAGATTTAAAAAAA GAAAGAATA AGTT CAATCTTTC AAAACTAAGCAACAA TERM 1025 1187991 - 1188016 + T 89 -9.2 -4.52589 | AGGTAATACTCTTTG GCTTTTAACA AGCGAA TGTTAAAAGC TTTTCTCTAGAAAGG TERM 1026 1188060 - 1188043 - T 74 -9.1 -3.07291 | opp_overlap 1188043, overlap 1188033 1188030 AAGGAGGTGATCCAA CCGCAGG TTCA CCTACGG TTACCTTGTTACGAC TERM 1027 1189566 - 1189589 + T 95 -12.6 -3.63627 | TTTGTTTTTTGATAG GCTGTTGTTA TTCC TAACAACAGC TTTAGCGTATCACAA jhp1073 1191123 - 1190266 - | hypothetical protein TERM 1028 1191356 - 1191376 + r 76 -5.5 -5.12707 | overlap 1191346 TTTTTGTATTTTAAT GGTAAAAAA CGC TTTTTAACC TTTTTTAAAATTTGA TERM 1029 1191618 - 1191604 - R 82 -8.6 -4.12942 | TCAAACTCTGTAAAA TCCCTA CTA TAGGGA CACAGAGTGAGAACC rplS 1192332 - 1191976 - | 50S ribosomal protein L19 TERM 1030 1192309 - 1192324 + g 70 -3.2 -4.91573 | CTGAGCGTCTTCAAA CTGCTG AATG TAGCGG TTTTTCATGTGTTTT trmD 1193043 - 1192354 - | tRNA (guanine-N(1)-)-methyltransferase jhp1076 1193589 - 1193044 - | hypothetical protein TERM 1031 1193135 - 1193123 - G 86 -7.7 -4.96848 | overlap 1193103 TCTTGGATATAAAAA TCCCT ATA AGGGA TTAAAAAAATCTTAG TERM 1032 1193624 - 1193641 + r 70 -4.1 -4.99861 | opp_overlap 1193624 TGATCGCCTAAAGCA TGGGGAT TTTT ATCACCA TTTTTATCATTACTG jhp1077 1193952 - 1193599 - | hypothetical protein rpsP 1194199 - 1193969 - | 30S ribosomal protein S16 ffh 1195619 - 1194273 - | putative signal recognition particle protein TERM 1033 1195492 - 1195503 + g 70 -3 -5.01732 | TCTCTAGCGACTTTA TGAT GCAC ATCA TTTTTTAAAAGCGTT valS 1198252 - 1195634 - | valyl-tRNA synthetase jhp1081 1198390 - 1198797 + | flagellar assembly protein FliW TERM 1034 1198961 - 1198972 + G 74 -4.4 -5.00616 | overlap 1198969 AAATAGCCCCTTATT TAGC GAAC GCTA TTTTTTCAACACGCA TERM 1035 1198969 - 1199006 + G 72 -3.5 -5.0133 | gap 1, overlap 1198961 CCTTATTTAGCGAAC GCTATTTTTTCAACACGC AAG GCGTGGTCAATAAA-AGC TTTTTTAAAAAAATA murG 1198809 - 1199870 + | N-acetylglucosaminyl transferase jhp1083 1199979 - 1202072 + | putative Outer membrane protein TERM 1036 1203143 - 1203128 - g 79 -9 -3.8046 | opp_overlap 1203128, overlap 1203121 CTCAAAAACTTCAAA GCGTTG CTAT CAACGC TTTAGACAACAATGC TERM 1037 1203128 - 1203143 + G 74 -9 -3.53444 | opp_overlap 1203128 1203121 CTCAAAAACTTCAAA GCGTTG CTAT CAACGC TTTAGACAACAATGC TERM 1038 1205411 - 1205435 + G 73 -2.1 -5.26918 | overlap 1205404 GCGTGAAAGCGAATA TCTTTGCTTAT GGG GTAGGCACGGA TTTTTTATGGAATCT jhp1084 1202095 - 1205808 + | putative Outer membrane protein TERM 1039 1206008 - 1206022 + G 78 -2.8 -5.38549 | opp_overlap 1206008 GACGCTATTGATATA CACCAA AAA TTCGTG TTTTTATTGTTTAAG proC 1205822 - 1206595 + | pyrroline-5-carboxylate reductase fic 1206622 - 1207149 + | putative cAMP-induced cell filamentation protein jhp1087 1207660 - 1207235 - | putative metalloprotease TERM 1040 1207398 - 1207415 + g 74 -4.8 -4.66318 | opp_overlap 1207398, overlap 1207399 TCATCTTCTAAGCTA TGCCCT AATTTC AGGGCG TTTTCTTGGGCTAAT TERM 1041 1207704 - 1207688 - R 100 -10.9 -5.11937 | opp_overlap 1207688 AAGAAGTTTAAAAAA GCCCTAA AAC TTAGGGC TTATAAAAAATTAAG TERM 1042 1207688 - 1207704 + r 85 -10.9 -3.31322 | opp_overlap 1207688 AAGAAGTTTAAAAAA GCCCTAA AAC TTAGGGC TTATAAAAAATTAAG fldA 1208209 - 1207715 - | flavodoxin FldA jhp1089 1208882 - 1208301 - | hypothetical protein TERM 1043 1208509 - 1208499 - G 71 -4 -4.92314 | overlap 1208493 ATTAAGCCATAAAAA CTTT TTT AAAG GGTATTTGCTAAAAC fixS 1209007 - 1209198 + | putative component of cation transport for cbb3-type oxidase TERM 1044 1209988 - 1210003 + G 72 -3.3 -5.02476 | overlap 1209999 1210001 GTATGCGATCGGAGG CTCTA CCCCTT TAGAG TTTTTTAAACGCTGT trxB_2 1209224 - 1210198 + | putative thioredoxin reductase jhp1092 1211366 - 1210206 - | hypothetical protein TERM 1045 1210462 - 1210449 - G 76 -3.1 -5.28481 | gap 1 CATGTAAGCAAAAAA CGC-CA CCA TGAGCG CATACACCCCTATGA TERM 1046 1211089 - 1211067 - G 73 -8.4 -3.675 | overlap 1211068 ATACAAACCATACAA CCCCCACGCT AAA AGCATGAGGA TAAAACTATCAAAAA TERM 1047 1211088 - 1211068 - G 71 -9.7 -2.79415 | overlap 1211067 TACAAACCATACAAC CCCCACGCT AAA AGCATGAGG ATAAAACTATCAAAA TERM 1048 1211857 - 1211875 + G 75 -10.4 -3.03124 | opp_overlap 1211854 CCAATCAAGTGATCA CCGATATT GTC AATATCGG TATTGGGGGGTCAGA TERM 1049 1212288 - 1212310 + G 73 -8.4 -3.76224 | overlap 1212290 1212303 GGGAAGAAAAATTTT AACGCCCTTT TGA AAGGGGCGTA TTTAATGGATGAGCA TERM 1050 1212290 - 1212308 + G 82 -11 -3.46647 | overlap 1212288 1212303 GAAGAAAAATTTTAA CGCCCTTT TGA AAGGGGCG TATTTAATGGATGAG TERM 1051 1212792 - 1212803 + G 79 -5.8 -5.00616 | opp_overlap 1212771 GCCAAAGACTTGGCC CACC ACAG GGTG TTTTTTGGCAACCGC pgi 1211430 - 1213067 + | glucose-6-phosphate isomerase TERM 1052 1213146 - 1213163 + F 82 -8.5 -4.09243 | opp_overlap 1213146 CTCCATTCAAAATAA TCCGTTA ATCG TAACGGA TTTTAGCGCCATATA TERM 1053 1213163 - 1213146 - f 87 -8.5 -4.21812 | opp_overlap 1213146 CTCCATTCAAAATAA TCCGTTA ATCG TAACGGA TTTTAGCGCCATATA TERM 1054 1213800 - 1213816 + G 75 -9.5 -3.35349 | TATGTCTTTAGCGAC GCGTATT TAG AATACGC TTATAAGAATTATTT jhp1094 1213371 - 1214786 + | putative Outer membrane protein TERM 1055 1215224 - 1215237 + T 100 -8.1 -5.4505 | opp_overlap 1215223 1215224 TCAATGGATTTAAAG GGGGT TAAA ACCCC TTTTTTATTCAAGCG jhp1095 1217309 - 1215246 - | hypothetical protein TERM 1056 1215413 - 1215425 + g 75 -5.5 -4.75372 | AAAAGGATTTTTGGA GCGTT TTT AGCGC TTTTTCATCCGTAGT TERM 1057 1215991 - 1215979 - G 85 -9.1 -4.15854 | AAACCGATCGCAAAA GTGGG CGC CCCAC CGGTGCGGCTCAAAA jhp1096 1217517 - 1218170 + | amino acid ABC transporter permease TERM 1058 1218753 - 1218765 + G 75 -2.7 -5.22258 | CTTTGTGGTTTATGG CGTTA TCT TAATG TTTTATTTTACTTTA jhp1097 1218172 - 1218843 + | amino acid ABC transporter permease TERM 1059 1218964 - 1218978 + G 70 -2.8 -5.05782 | opp_overlap 1218975 TTTAGGGCCTAGCGG GTGC GGGAAAA GCAC TTTTTTAAAATGCCT TERM 1060 1219488 - 1219458 - g 70 -2.6 -5.01732 | overlap 1219459 AATTCGCGCAAAAAA TCGCTAGCAAAA TCGTGTT TTTTGATAGCGG TAAGATCGCTGAAGA jhp1098 1218845 - 1219591 + | amino acid ABC transporter ATP-binding protein jhp1099 1219640 - 1220473 + | amino acid ABC transporter jhp1100 1220595 - 1221152 + | hypothetical protein TERM 1061 1221180 - 1221205 + T 75 -4.8 -5.02606 | opp_overlap 1221181, overlap 1221175 1221181 GCTTCATTCTTAAAA TCTCTTAATC TTTTAT GATTAGGAGG TTTTCTTATTTACTG gluP 1222646 - 1221423 - | glucose/galactose transporter TERM 1062 1222399 - 1222380 - G 70 -5.6 -4.36914 | CGCCGCCGGATAAAA CAACGCGC ACCC GCTCGCTG TGATCACAAAACCAA jhp1102 1224082 - 1222775 - | hypothetical protein TERM 1063 1222903 - 1222883 - G 90 -8.9 -5.16133 | ACTATAAGACAAAAA GCCAAAGGC TAA GCCATCGGC AATGGAGAAGGTTAA TERM 1064 1223776 - 1223761 - G 76 -4.6 -5.10601 | overlap 1223762 ACAAAATCACAAAAA TCGCTC CCGA GAGCGC TACGATGCCTAAAGC TERM 1065 1223775 - 1223762 - G 70 -8.1 -3.6392 | overlap 1223761 CAAAATCACAAAAAT CGCTC CCGA GAGCG CTACGATGCCTAAAG TERM 1066 1223875 - 1223856 - G 73 -8.6 -3.69354 | gap 1, opp_overlap 1223855 1223858 GCCGATAACCCTAAA CCCA-CGCT CAT AGCGATGGG GGTGTTTGCCCACAA TERM 1067 1224359 - 1224331 - R 100 -11.1 -4.77173 | opp_overlap 1224330 1224333, overlap 1224333 1224334 TTGTTATAAAACAAA GACCCCCATAAGT TGG ACTTATGGGGATA ATCTTCAAAAAGGAG TERM 1068 1224333 - 1224357 + r 86 -11.5 -2.73875 | opp_overlap 1224333 1224331 1224334, overlap 1224330 GTTATAAAACAAAGA CCCCCATAAGT TGG ACTTATGGGGA TAATCTTCAAAAAGG TERM 1069 1224357 - 1224333 - R 100 -13.7 -3.99938 | opp_overlap 1224330 1224333, overlap 1224331 1224334 GTTATAAAACAAAGA CCCCCATAAGT TGG ACTTATGGGGA TAATCTTCAAAAAGG TERM 1070 1224356 - 1224334 - R 100 -15 -2.98878 | opp_overlap 1224333 1224330, overlap 1224333 1224331 TTATAAAACAAAGAC CCCCATAAGT TGG ACTTATGGGG ATAATCTTCAAAAAG TERM 1071 1224500 - 1224520 + r 83 -8.3 -4.18018 | opp_overlap 1224497 TATTGGAGTTAATCC CCCCCTTTT TAA AAAAGAGGG TTTTCAATACGCAAA jhp1103 1226455 - 1224524 - | putative Outer membrane function TERM 1072 1224936 - 1224925 - G 70 -5.8 -4.3208 | CCCCATAAGTCAAAA CGTC AGAA GACG AGTTAAAAAAGCTGG TERM 1073 1225849 - 1225861 + g 75 -7.7 -4.12942 | opp_overlap 1225848, overlap 1225857 TGCTATTTAAAGGAG CAAGC CCA GCTTG TTTTAAAGCCTTTGA TERM 1074 1226409 - 1226380 - G 76 -2.1 -5.42259 | gap 1 CCACGCTTAAAAAAA CGCCGTTGTCTTCA GCA TGGAG-CAATGACG CCGCAAGAGTTAGAG TERM 1075 1226847 - 1226869 + r 100 -11.4 -4.37198 | GTTTTTCCAAAGTTC CCTTAAGGCT TTT AGCTTTAAGG TTTTCCCTTTAAATT deoD 1227619 - 1226918 - | purine nucleoside phosphorylase deoB 1228857 - 1227616 - | phosphopentomutase jhp1106 1230125 - 1228869 - | putative nucleoside transporter TERM 1076 1230364 - 1230354 - H 72 -2.6 -5.40625 | AGATTATACAAAAAA TTTT CTT AAAA ATCCACTAAAATTGC jhp1107 1230455 - 1231786 + | multidrug ABC transporter TERM 1077 1231848 - 1231826 - g 85 -7 -5.07107 | GAAATTTCCAAAAAA GTCTTGCACA TTG TAGGCAAGAC AAACGCCACTTACAA TERM 1078 1232478 - 1232466 - g 77 -6.3 -4.65263 | ATTTCTTAAAAGAAA TGCAA AAC TTGCA CCCTCATTTCTTTGA jhp1108 1231802 - 1232563 + | hypothetical protein TERM 1079 1232558 - 1232573 + T 88 -6.2 -5.45652 | GCTAAATATTTAGAC GCTTAA AGCT TTAAGC TTTTTTGTTGAGCAT jhp1109 1233719 - 1232568 - | putative Na+/H+ antiporter jhp1110 1235124 - 1233745 - | hypothetical protein TERM 1080 1233782 - 1233795 + g 76 -2.3 -5.40004 | opp_overlap 1233782, overlap 1233764 TTTTTCTCTTTATAA GTGGT AAAA ACCCC TTTTTTGATTTCATA TERM 1081 1234821 - 1234807 - G 73 -5.6 -4.65933 | overlap 1234809 CATGCTCAAAATAAA GGCGCT TAG AGCGAC AAAATAAAACACGCT jhp1111 1236469 - 1235294 - | sugar efflux transporter TERM 1082 1235490 - 1235458 - G 70 -2.6 -5.00884 | gap 1 AGCTCCCCGAAAAAA TCGCGCTCG-CAACA TCCG TGGCATCGGGCGCGA GTTGCAACACCCTCA TERM 1083 1235606 - 1235596 - G 85 -5.4 -5.19879 | TTTTAAACACAAAAA GCAA GAG TTGC GGGCAAATGACTAAA TERM 1084 1236041 - 1236061 + g 100 -6.1 -5.80003 | opp_overlap 1236046 CGAACTCCCTAACGC TAACAGCCC TAA GGCCTGTTG TTTTTTGTTTCTTGG TERM 1085 1236411 - 1236401 - G 74 -4.6 -4.85782 | GGTGTTAAAAATAAA CGCC GAA AGCG AAAACACAAAAACCC TERM 1086 1236849 - 1236830 - g 78 -4.2 -5.3167 | gap 1 TAAAAATAAAGAAAA TGGCCC-GC ACC GCTGGGACA AATTGCACAAAGATT jhp1112 1236741 - 1237484 + | carbonic anhydrase TERM 1087 1237525 - 1237504 - T 80 -7.3 -4.67038 | CCGCTAAAATTAAAA CTCTCTCTT TTAA AAGAGGGAG GTAAAAATCATTCTT jhp1113 1238866 - 1237715 - | hypothetical protein TERM 1088 1239020 - 1239010 - R 71 -5.4 -4.65916 | opp_overlap 1239008 TCCATTCCAATAAAA CTTG ATA CAAG TCTGCCTTGATACCC asd 1240341 - 1239301 - | aspartate-semialdehyde dehydrogenase TERM 1089 1239504 - 1239514 + g 76 -4.6 -5.055 | CATCGCAAACAACCA CGCT AGG GGCG TTTTTTAAAACTTCA hisS 1241656 - 1240328 - | histidyl-tRNA synthetase waaF 1241718 - 1242767 + | ADP-heptose--LPS heptosyltransferase II TERM 1090 1242942 - 1242905 - T 71 -7.9 -3.50929 | opp_overlap 1242916, overlap 1242899 1242907 1242916 GAAATTATAGGATAA TATCCAAAAAAGCGTTT TTAA AAACGCTTTTTTAGAGT CAAAGCCATTAGGCC TERM 1091 1242940 - 1242907 - T 100 -14.9 -3.31766 | opp_overlap 1242916, overlap 1242899 1242905 1242916 AATTATAGGATAATA TCCAAAAAAGCGTTT TTAA AAACGCTTTTTTAGA GTCAAAGCCATTAGG TERM 1092 1242916 - 1242931 + T 89 -7.6 -5.0538 | opp_overlap 1242907 1242905 1242916 ATAATATCCAAAAAA GCGTTT TTAA AAACGC TTTTTTAGAGTCAAA TERM 1093 1242931 - 1242916 - T 91 -7.6 -5.17054 | opp_overlap 1242916, overlap 1242907 1242905 ATAATATCCAAAAAA GCGTTT TTAA AAACGC TTTTTTAGAGTCAAA jhp1117 1243115 - 1242951 - | putative motility protein TERM 1094 1243294 - 1243271 - R 100 -11.2 -5.00884 | opp_overlap 1243277, overlap 1243277 1243279 ATTTTTCTTAAAAAA TAAAAACGCT CAAA AGCGTTTTTA AGACTGAATACAAAA TERM 1095 1243288 - 1243277 - R 95 -5.8 -5.75538 | opp_overlap 1243277, overlap 1243271 1243279 CTTAAAAAATAAAAA CGCT CAAA AGCG TTTTTAAGACTGAAT TERM 1096 1243277 - 1243288 + r 74 -5.8 -4.60041 | opp_overlap 1243271 1243277 1243279 CTTAAAAAATAAAAA CGCT CAAA AGCG TTTTTAAGACTGAAT fusA 1245736 - 1243658 - | elongation factor G rpsG 1246215 - 1245748 - | 30S ribosomal protein S7 rpsL 1246638 - 1246231 - | 30S ribosomal protein S12 rpoB 1255398 - 1246726 - | DNA-directed RNA polymerase subunit beta/beta' TERM 1097 1247005 - 1247019 + g 79 -5 -5.14563 | overlap 1247006 GATCACACGAGTGTT TTCTTC TTT GAAGAG TTTTTTACTGACCAA TERM 1098 1249869 - 1249853 - G 88 -10.9 -4.08216 | TGATCCCCGTCAAAA TCAGCGT TAA ACGCTGA GCACACTAACGGGTG TERM 1099 1250246 - 1250256 + g 71 -6.8 -4.0896 | TTGCCTTTAATGATC TCGC TGA GCGA TTTTAAAGGCCGTTT TERM 1100 1252956 - 1252972 + g 80 -6.5 -4.66163 | opp_overlap 1252956 AGCCATTCCAAGGCA TGAACGC CAC GCGTACA TTTTTCCCTAACGCT TERM 1101 1254541 - 1254553 + g 82 -6.3 -4.94962 | opp_overlap 1254509, overlap 1254530 CATAGGGTATTCCAC CCATT CTA AATGG TTTTCTTTAAGTTCT rplL 1255997 - 1255620 - | 50S ribosomal protein L7/L12 rplJ 1256534 - 1256040 - | 50S ribosomal protein L10 rplA 1257347 - 1256643 - | 50S ribosomal protein L1 rplK 1257817 - 1257392 - | 50S ribosomal protein L11 nusG 1258365 - 1257835 - | transcription antitermination protein NusG secE 1258571 - 1258392 - | preprotein translocase subunit SecE rpmG 1258976 - 1258818 - | 50S ribosomal protein L33 tuf 1260222 - 1259023 - | elongation factor Tu TERM 1102 1259433 - 1259447 + g 76 -2.1 -5.38047 | gap 1, overlap 1259433 TTCTAAACATTTCTA C-ACCG GTTA CGGTCG TTTTTTGTGTGGCTC TERM 1103 1260383 - 1260399 + H 74 -9.5 -2.65815 | opp_overlap 1260373 1260395 TTGAACCGCCGACCT CTTCCTT ACC AAGGAAG TGCTCTGCCTCTGAG TERM 1104 1262356 - 1262367 + G 75 -3 -5.24129 | GGTGTGCAAAATGGC TCAT ATCT ATGA TTTTTTATGCGAGCA jhp1129 1260926 - 1262662 + | ABC transporter ATP-binding protein jhp1130 1263339 - 1262671 - | hypothetical protein M.HpyI 1264516 - 1263527 - | type II DNA modification (methyltransferase jhp1132 1265024 - 1264845 - | hypothetical protein cysE 1265768 - 1265253 - | O-serine acetyltransferase TERM 1105 1266351 - 1266320 - R 74 -9 -3.04416 | gap 1, opp_overlap 1266328 AAAACAAATACTATA GCTAAATCA-TGCTT TTT AAGCAATAATTTAGC CCATCAAAAACCCTT atpE 1266682 - 1266365 - | F0F1 ATP synthase subunit C pnp 1268881 - 1266815 - | polynucleotide phosphorylase/polyadenylase TERM 1106 1268902 - 1268926 + r 74 -7.1 -4.03043 | overlap 1268900 1268903 ATGTTCCTTTTTGAG ATTGGGCGC GTTGTTA GCGCCCAAG TATTTTTCAATTTCT TERM 1107 1268903 - 1268925 + r 83 -10.6 -3.00199 | overlap 1268902 1268900 TGTTCCTTTTTGAGA TTGGGCGC GTTGTTA GCGCCCAA GTATTTTTCAATTTC jhp1137 1269588 - 1268884 - | hypothetical protein imp 1271902 - 1269602 - | putative role in outermembrane permeability TERM 1108 1270811 - 1270799 - GR 71 -6.3 -4.14633 | CAGGTTTAAAAAATA CTTGA TAT TCAAG CCGTAATAATTGTTT jhp1139 1272344 - 1271865 - | hypothetical protein purD 1273667 - 1272393 - | glycinamide ribonucleotide synthetase TERM 1109 1272983 - 1273009 + g 72 -9.4 -3.03338 | opp_overlap 1272980, overlap 1272985 TAGAGAAAAAGTTTG CAGGAGCGATGG CCC CCATACCTCCTG TATTGACCCCATTAT jhp1141 1274667 - 1273981 - | putative ABC transporter, ATP-binding protein TERM 1110 1274370 - 1274339 - G 71 -6 -4.15788 | AAGCGTTTTAACAAA TTTAGGGCTTTTGA TTCA TCAAAATCGCTAAA AAAATCCTTATAAAA jhp1142 1275365 - 1274661 - | hypothetical protein dld 1278245 - 1275405 - | D-lactate dehydrogenase TERM 1111 1276294 - 1276276 - G 83 -5.3 -5.27335 | gap 1, opp_overlap 1276276 1276280, overlap 1276259 1276280 CTTTTTAAAGAAAAA CGAGCCAC GCTT GTGG-TCG TTTGCATGTGATTTA jhp1144 1278317 - 1278655 + | hypothetical protein hemD 1278658 - 1279329 + | uroporphyrinogen-III synthase jhp1146 1279386 - 1279778 + | hypothetical protein TERM 1112 1279794 - 1279783 - T 83 -5.8 -5.26875 | opp_overlap 1279768 1279783 1279792 GCGTTAATTAAAAAA CGCT TTCT AGCG TTTTATTAACGCTTG TERM 1113 1279783 - 1279794 + T 74 -5.8 -4.65747 | opp_overlap 1279783, overlap 1279768 1279792 GCGTTAATTAAAAAA CGCT TTCT AGCG TTTTATTAACGCTTG hemN_2 1280866 - 1279829 - | coproporphyrinogen III oxidase TERM 1114 1281096 - 1281082 - g 72 -4.3 -4.66535 | AAGTTTGAAAAGAAA GCTTT AGGTA AAAGC AAAATCGTTAACATG jhp1148 1280962 - 1281252 + | periplasmic cytochrome C-553 mutT 1281413 - 1281886 + | dinucleoside polyphosphate hydrolase TERM 1115 1282948 - 1282958 + G 71 -6.8 -4.08767 | TCGCATTCTGGGGTG GCGA GCA TCGC TTTTAAAGCCCTAGC lysC 1281880 - 1283097 + | aspartate kinase TERM 1116 1283612 - 1283597 - g 86 -10.4 -4.10453 | CAAACTCTTTGAAAA CGCGCT TTTT AGCGCG CTATACAATAAGGTT jhp1151 1283094 - 1283636 + | hypothetical protein holB 1283633 - 1284289 + | DNA polymerase III subunit delta' TERM 1117 1284492 - 1284503 + G 79 -5.8 -4.91511 | AAGAGATTGCATTTT GGCT AAAG AGCC TTTTTATGATGGGGT folP 1284286 - 1285428 + | dihydropteroate synthase TERM 1118 1285431 - 1285441 + T 71 -5.4 -4.58773 | opp_overlap 1285422, overlap 1285439 1285440 AGAAACGGATTGAAC CCAA TTT TTGG TTTTGATTTAATCAA TERM 1119 1285476 - 1285487 + T 78 -5.8 -4.81685 | opp_overlap 1285476, overlap 1285469 1285466 GTTGGTGATAAAAAA CGCT CAAA AGCG TTTTTGATGATTAAT TERM 1120 1285487 - 1285476 - T 83 -5.8 -5.24129 | opp_overlap 1285469 1285466 1285476 GTTGGTGATAAAAAA CGCT CAAA AGCG TTTTTGATGATTAAT jhp1154 1285984 - 1285523 - | hypothetical protein TERM 1121 1286577 - 1286589 + G 87 -3.3 -5.70829 | overlap 1286578 CGTTGTGGGGGGCTT AGCCA TGC TGGCG TTTTTTTATAATATT TERM 1122 1286578 - 1286588 + G 71 -6.8 -4.00057 | overlap 1286577 GTTGTGGGGGGCTTA GCCA TGC TGGC GTTTTTTTATAATAT jhp1155 1286335 - 1287231 + | hypothetical protein jhp1156 1287235 - 1288482 + | hypothetical protein TERM 1123 1289045 - 1289032 - g 73 -8.1 -3.90286 | CATTACAAACGCAAA CTCCC CGTA GGGAG CGATGAATACGAGTT jhp1157 1288561 - 1289112 + | hypothetical protein carA 1289112 - 1290239 + | carbamoyl phosphate synthase small subunit TERM 1124 1290628 - 1290610 - g 72 -9.6 -3.04322 | opp_overlap 1290608 CGCAAGGTTTGAATA CCGCTAAG TGG CTTAGCGA AGAGTTTTTATTAGA amiF 1290408 - 1291412 + | formamidase TERM 1125 1291433 - 1291458 + T 79 -6.9 -4.69464 | AACCTTGTATTTTTG CTAGAACCTGT TTTT AAAGGTTCTGG TTTTTCCCCTATTTT jhp1160 1292305 - 1291895 - | hypothetical protein TERM 1126 1292377 - 1292364 - R 74 -3.1 -5.51612 | gap 1 ACAGAAAAAATAAAA TG-CGC CAT GCGACA AACCCTTTAAACATC maf 1293054 - 1292482 - | Maf-like protein alaS 1295599 - 1293056 - | alanyl-tRNA synthetase TERM 1127 1293239 - 1293259 + g 70 -2.6 -5.02476 | overlap 1293237 1293241 TTTCACCCCGCATGC GAGAGTGA TTCGC TCATTTTC TTTTTTAAACACTAT TERM 1128 1293448 - 1293458 + g 70 -5.4 -4.44608 | GTTTGTTGATGCCGG CGAT CAC ATCG TTATTTTTCAATAAA TERM 1129 1293977 - 1293994 + g 89 -5.5 -5.4477 | overlap 1293966 1293978 CTCATCGCTCACTTG CGCGATC ACTT GATCGCC TTTTTTTAGCGCTTT TERM 1130 1293978 - 1293993 + g 79 -9 -3.85235 | overlap 1293966 1293977 TCATCGCTCACTTGC GCGATC ACTT GATCGC CTTTTTTTAGCGCTT TERM 1131 1295592 - 1295582 - G 75 -5.4 -4.77925 | opp_overlap 1295590 AAAAAATTGTAAAAA TTCG TTG CGAA TGTCCATGGGTATTC jhp1163 1295719 - 1295949 + | hypothetical protein TERM 1132 1296018 - 1296055 + T 70 -4.3 -4.88295 | opp_overlap 1296026, overlap 1296021 1296022 1296023 1296026 GCTTTATTGCTTGGT TAGATTAACGCTTTGAT TTTG ATTAAAGCGTTAGGTTG TTTTTAACTTTATTT TERM 1133 1296021 - 1296052 + T 72 -6 -4.50298 | opp_overlap 1296026, overlap 1296018 1296022 1296023 1296026 TTATTGCTTGGTTAG ATTAACGCTTTGAT TTTG ATTAAAGCGTTAGG TTGTTTTTAACTTTA TERM 1134 1296022 - 1296051 + T 78 -9.5 -3.28552 | opp_overlap 1296026, overlap 1296021 1296018 1296023 1296026 TATTGCTTGGTTAGA TTAACGCTTTGAT TTTG ATTAAAGCGTTAG GTTGTTTTTAACTTT TERM 1135 1296023 - 1296050 + T 82 -10.8 -2.55505 | opp_overlap 1296026, overlap 1296022 1296021 1296018 1296026 ATTGCTTGGTTAGAT TAACGCTTTGAT TTTG ATTAAAGCGTTA GGTTGTTTTTAACTT TERM 1136 1296026 - 1296047 + T 73 -8.1 -3.40836 | opp_overlap 1296026, overlap 1296023 1296022 1296021 1296018 GCTTGGTTAGATTAA CGCTTTGAT TTTG ATTAAAGCG TTAGGTTGTTTTTAA TERM 1137 1296425 - 1296388 - T 80 -7.9 -4.28069 | gap 1 AGAGAATTTAAGAAA GGGGGTTCAAAAGAAAAA AGA TTTTTCATC-AAACCCCC CCAAAAAACAAAGAG TERM 1138 1296525 - 1296541 + T 87 -10.9 -3.53012 | TTAAAAAAGGGGGTT CTCCCTT AAA AAGGGAG TTTCAAAAAAAAGGG TERM 1139 1296572 - 1296554 - T 79 -2.4 -5.76949 | GAGTTTCAAAAAAAA GGGTTC AAAAAAG AAACCC CTTAAAAAAAGAAGC TERM 1140 1296874 - 1296857 - T 72 -3.3 -5.14819 | overlap 1296858 1296859 AAATCAAAAAACAAA CCCCCCC CAAA AAGAGGG TTAAAAAAGGGGGTT babB 1299026 - 1296915 - | outer membrane protein - adhesin rpsR 1299560 - 1299303 - | 30S ribosomal protein S18 ssb 1300128 - 1299583 - | single-strand DNA-binding protein rpsF 1300571 - 1300143 - | 30S ribosomal protein S6 jhp1168 1301722 - 1300700 - | DNA polymerase III subunit delta vacB 1303646 - 1301712 - | ribonuclease II family protein TERM 1141 1302753 - 1302767 + g 82 -8.6 -4.26076 | opp_overlap 1302752 ATACACTAAAGCCAG GCGTTT TTC AAACGC TTTTAATGAGCATGC TERM 1142 1303639 - 1303625 - G 85 -2.8 -5.81032 | TAACCCCAAAAAAAA GGCTTC TTA AAAACC CTTGCATCAAAAAAC aroE 1304446 - 1303646 - | shikimate 5-dehydrogenase jhp1171 1305113 - 1304454 - | hypothetical protein jhp1172 1306168 - 1305122 - | putative peptide ABC transporter, ATP-binding protein TERM 1143 1305359 - 1305339 - G 76 -4.5 -5.04987 | overlap 1305341 AACATGCCCAAAAAA GCCTGCGGG AAA CCCGCCACC ACTAATAAAATCGCA TERM 1144 1305917 - 1305943 + g 80 -2.2 -5.61824 | overlap 1305916 1305919 GAGGAGGTAGCGCTC CCCTATGGGCTT GTC AAAACCATAGAG TTTTTTTAAATTTTC jhp1173 1307952 - 1306165 - | hypothetical protein TERM 1145 1306297 - 1306286 - G 73 -2.2 -5.30616 | TTAGGCAAATAAAAA TGCG GTAT CACA TAAAACCCCCACAAC TERM 1146 1307046 - 1307057 + g 70 -5.8 -4.41548 | AGAAAAACCCTTGCA TGCC GCTT GGCA TTTTGTGGGCTATGA TERM 1147 1307187 - 1307177 - G 84 -6.8 -5.00616 | GCCCCGCTTAAAAAA GCCT GTA AGGC GACGGTTTCATCTTT TERM 1148 1307469 - 1307491 + g 74 -4.8 -4.66953 | AAATGAATTTAACAT GGTGCTTGTC TAA GATAACCGCC TTTTTAACATCTTGG TERM 1149 1307905 - 1307891 - G 86 -10 -4.05446 | TCGCCTAAGTATAAA TAGGGC GTA GCCCTA AGGAAACAAAACACC trpS 1308933 - 1307953 - | tryptophanyl-tRNA synthetase jhp1175 1309742 - 1309005 - | hypothetical protein secG 1309875 - 1310471 + | preprotein translocase subunit SecG frr 1310471 - 1311028 + | ribosome recycling factor TERM 1150 1311511 - 1311500 - g 76 -7.2 -4.18494 | CATTCTCATTTAAAA GCCC AAGA GGGC GCGTGTTTGCCTAGC pyrE 1311032 - 1311637 + | orotate phosphoribosyltransferase TERM 1151 1311692 - 1311680 - g 80 -7.7 -4.4017 | opp_overlap 1311679 GCAAGCGTTAGAAAA CCCTT TAA AAGGG CTGTATCTCTCTTTA TERM 1152 1311722 - 1311732 + G 74 -4 -5.06735 | ACGCTTAAAGGCCTT TATC ACC GATA TTTTTATGATTTATA jhp1179 1311627 - 1312085 + | hypothetical protein jhp1180 1312082 - 1312786 + | hypothetical protein nuoA 1312879 - 1313280 + | NADH dehydrogenase subunit A nuoB 1313280 - 1313759 + | NADH dehydrogenase subunit B TERM 1153 1314113 - 1314125 + G 75 -5.5 -4.69053 | AACCGCCGTAGGGTG CGCGT GAA ATGCG TTTTGTTGCCTAATG nuoC 1313759 - 1314556 + | NADH dehydrogenase subunit C TERM 1154 1315601 - 1315619 + G 80 -4.6 -5.31456 | opp_overlap 1315601 TGCCCCCACAGAAAG CCCTAA AGGGGAA TTAGGG TTTTTTATCCATTCA nuoD 1314558 - 1315787 + | NADH dehydrogenase subunit D nuoE 1315784 - 1316014 + | putative NADH oxidoreductase I TERM 1155 1316689 - 1316699 + G 73 -6.8 -4.18197 | opp_overlap 1316677 1316689, overlap 1316677 1316676 ACAGCCTTTAAAGAA GGCA TTT TGCC TTTTGAATCACAACT nuoF 1316017 - 1317003 + | putative NADH oxidoreductase I TERM 1156 1318344 - 1318327 - g 71 -4.9 -4.57569 | GCACGGCTTTAAAAA GCTTAGA AGAT TCTAAAC AAAGCATTGTGGATG TERM 1157 1318412 - 1318397 - g 76 -4.7 -5.17054 | AGAAGAGCGAAAAAA GGCTT TAGAAC AAGCC GAACAAGGGTGCAGT nuoG 1317000 - 1319549 + | NADH dehydrogenase subunit G TERM 1158 1320290 - 1320303 + G 80 -2.3 -5.56263 | TTTTTAGCGGAATAC GCGCA TTTA TTCGC TTTTTCTTTTGTGAT nuoH 1319546 - 1320535 + | NADH dehydrogenase subunit H nuoI 1320545 - 1321207 + | NADH dehydrogenase subunit I TERM 1159 1321283 - 1321314 + G 86 -4.4 -5.4182 | AACCACAAATATCCT CTATGCCATTACCG CTCT CGCTAGTAGCATGG TTTTTATTTCTGCTT nuoJ 1321200 - 1321748 + | NADH dehydrogenase subunit J nuoK 1321745 - 1322047 + | NADH dehydrogenase subunit K TERM 1160 1322549 - 1322537 - g 81 -2.6 -5.67063 | opp_overlap 1322547 1322548, overlap 1322547 1322548 GGTATCATAAAAAAA GCGC GAATA ACGC TTCTATTGAAGCCTT TERM 1161 1323336 - 1323348 + G 71 -4.1 -5.00616 | TTATAGCTTCAGACT CATCA TGC TGGTG TTTTTTGCACCCAAA TERM 1162 1323447 - 1323465 + G 82 -3.8 -5.40004 | overlap 1323437 TTTGGCGGTCATTGC CGGGTTTT TTG AAGAGCCG TTTTTTCATTTCATC TERM 1163 1323540 - 1323555 + G 76 -9 -3.63694 | overlap 1323550 TCTTTTAATCAGTAT CACCAC CATA GTGGTG TTGTTGAGCATCGCT nuoL 1322050 - 1323888 + | NADH dehydrogenase subunit L nuoM 1323892 - 1325430 + | NADH dehydrogenase subunit M TERM 1164 1326519 - 1326492 - g 72 -3.4 -5.03747 | gap 1, opp_overlap 1326494 1326495, overlap 1326494 1326495 AAAGCCGGGAAAAAA CATGGGATGAACG CTA CGATCACCCC-TA TTCTAAATTCAACGG TERM 1165 1326518 - 1326494 - g 71 -6.3 -4.13963 | opp_overlap 1326494 1326495, overlap 1326492 1326495 AGCCGGGAAAAAACA TGGGATGAACG CTA CGATCACCCCT ATTCTAAATTCAACG TERM 1166 1326517 - 1326495 - g 72 -9.8 -3.07655 | opp_overlap 1326494 1326495, overlap 1326494 1326492 GCCGGGAAAAAACAT GGGATGAACG CTA CGATCACCCC TATTCTAAATTCAAC TERM 1167 1326697 - 1326709 + G 85 -6.9 -5.011 | GATGTTAGTTAATAG CGCGG TGG CTGCG TTTTATTATTTCCGT nuoN 1325417 - 1326895 + | NADH dehydrogenase subunit N TERM 1168 1327063 - 1327053 - g 86 -8.2 -4.87291 | TATGCTAATGAAAAA CCGC CGA GCGG GATTGAAGCGTCTTT TERM 1169 1327871 - 1327885 + G 74 -5 -4.82901 | GAGCAACGCTAATAT GCTTTT TAA AGAAGC TTTTTCTAACGCCAA TERM 1170 1327929 - 1327912 - g 72 -8.4 -3.45621 | opp_overlap 1327912, overlap 1327910 CCAAAGACAAAGAGA GCGCGA GTGAAA TCGCGC TTAATTGGGCTGAAG TERM 1171 1327912 - 1327929 + G 70 -8.4 -3.35813 | opp_overlap 1327912 1327910 CCAAAGACAAAGAGA GCGCGA GTGAAA TCGCGC TTAATTGGGCTGAAG TERM 1172 1328640 - 1328625 - g 70 -3.2 -4.8622 | overlap 1328627 TCGCTCAAGGAAAAA GCGCAA ATTA TTGCCC TAAACGCTTTAAAAG TERM 1173 1329087 - 1329075 - g 77 -7.7 -4.24326 | AAAGATTATTCAAAA GCGTT AGA AACGC TAGACAAACTCTTAA pflA 1326885 - 1329296 + | flagellar functional protein TERM 1174 1329712 - 1329690 - g 74 -4.2 -5.02074 | TCAGGCTTTAAAAAA CACGCTTT TAAACGC AAAGCATG AAATAAAGCCCCTAA TERM 1175 1330436 - 1330424 - g 89 -5.5 -5.4505 | CGCCTGAAGAAAAAA TCGCC GTG AGCGA AGAAGAAAAATTTGA jhp1196 1329298 - 1330677 + | phosphomannomutase jhp1197 1330858 - 1331229 + | hypothetical protein trpA 1332194 - 1331406 - | tryptophan synthase subunit alpha trpB 1333372 - 1332191 - | tryptophan synthase subunit beta trpC 1334732 - 1333374 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 1176 1334218 - 1334233 + g 76 -7.6 -4.29227 | ATGTCGTATTGGAGT TTGAGC AAGC GCTCAA TTTCTTGCTGGTTGG trpD 1335732 - 1334725 - | anthranilate phosphoribosyltransferase TERM 1177 1334760 - 1334772 + g 74 -6.2 -4.33653 | opp_overlap 1334760 1334759 TGATTTTTTGTAAAT GCGC ATAAG GCGC TTTGGTTTTTAAATG trpG 1336313 - 1335729 - | anthranilate synthase component II TERM 1178 1336081 - 1336067 - G 74 -6.4 -4.46233 | opp_overlap 1336067 1336068, overlap 1336068 GCAAGCCCAAACAAA CCCCTA AAA TAGGGA ATTTCTTTTTAGCCA trpE 1337812 - 1336310 - | anthranilate synthase component I TERM 1179 1337397 - 1337385 - G 76 -2 -5.4477 | AAATCTTCAAAAAAA TTGA GCATT TCAA AAGAAAAAACGCCCG TERM 1180 1337487 - 1337464 - G 77 -6 -4.58283 | overlap 1337484 TAACGCTTTTAAAAA GCCCCCTTAA AGCG TCAAAAGGGC TAGGCTCAAAGAGTT TERM 1181 1337851 - 1337837 - R 75 -5 -4.94262 | TACATTAAAAATAAA CTCGTA TTC TACAAG AAATAGATAAATGAA jhp1204 1339099 - 1338041 - | hypothetical protein jhp1205 1339904 - 1339167 - | hypothetical protein jhp1206 1340027 - 1340575 + | hypothetical protein TERM 1182 1340582 - 1340611 + T 83 -6.6 -4.82901 | gap 1, overlap 1340583 GCTCAATAATCGTTT TGCAAGAGATAGA TATTT TCT-TCTCTTGCG TTTTTCTAACAGCAC TERM 1183 1340583 - 1340610 + T 71 -7.9 -3.49419 | gap 1, overlap 1340582 CTCAATAATCGTTTT GCAAGAGATAGA TATTT TCT-TCTCTTGC GTTTTTCTAACAGCA jhp1207 1341292 - 1340639 - | putative transcriptional regulator jhp1208 1342003 - 1342356 + | hypothetical protein jhp1209 1342380 - 1342865 + | hypothetical protein TERM 1184 1342921 - 1342907 - f 90 -5.8 -5.52384 | GGGGGAGTAAAAAAA TTAAAG AAA CTTTAA AGCGCATTCTCATGG TERM 1185 1343206 - 1343218 + G 74 -6.3 -4.39414 | opp_overlap 1343206 1343205 TTTTGCCGGAGAAAG GCAAA CGA TTTGC TTTATATTTGGTCTT pnuC 1343051 - 1343713 + | nicotinamide mononucleotide transporter jhp1211 1343701 - 1344315 + | hypothetical protein rplQ 1345444 - 1345094 - | 50S ribosomal protein L17 rpoA 1346478 - 1345444 - | DNA-directed RNA polymerase subunit alpha rpsD 1347116 - 1346490 - | 30S ribosomal protein S4 rpsK 1347521 - 1347126 - | 30S ribosomal protein S11 rpsM 1347906 - 1347544 - | 30S ribosomal protein S13 rpmJ 1348023 - 1347910 - | 50S ribosomal protein L36 infA 1348320 - 1348102 - | translation initiation factor IF-1 map 1349081 - 1348320 - | methionine aminopeptidase secY 1350343 - 1349081 - | preprotein translocase subunit SecY rplO 1350779 - 1350378 - | 50S ribosomal protein L15 rpsE 1351258 - 1350797 - | 30S ribosomal protein S5 rplR 1351611 - 1351255 - | 50S ribosomal protein L18 rplF 1352161 - 1351625 - | 50S ribosomal protein L6 rpsH 1352568 - 1352173 - | 30S ribosomal protein S8 rpsN 1352763 - 1352578 - | 30S ribosomal protein S14 rplE 1353318 - 1352773 - | 50S ribosomal protein L5 rplX 1353553 - 1353332 - | 50S ribosomal protein L24 rplN 1353921 - 1353553 - | 50S ribosomal protein L14 rpsQ 1354184 - 1353924 - | 30S ribosomal protein S17 rpmC 1354398 - 1354198 - | 50S ribosomal protein L29 rplP 1354810 - 1354385 - | 50S ribosomal protein L16 rpsC 1355517 - 1354813 - | 30S ribosomal protein S3 rplV 1355889 - 1355521 - | 50S ribosomal protein L22 rpsS 1356180 - 1355899 - | 30S ribosomal protein S19 rplB 1357022 - 1356192 - | 50S ribosomal protein L2 TERM 1186 1356221 - 1356233 + g 87 -3.3 -5.73978 | TTCTGGAAATGATGA GCTTG TCG CTAGC TTTTTTCTTTCTAGT rplW 1357319 - 1357038 - | 50S ribosomal protein L23 rplD 1357970 - 1357323 - | 50S ribosomal protein L4 rplC 1358580 - 1358005 - | 50S ribosomal protein L3 rpsJ 1358931 - 1358617 - | 30S ribosomal protein S10 jhp1241 1359097 - 1360227 + | hypothetical protein TERM 1187 1360927 - 1360907 - g 86 -9.7 -4.08216 | opp_overlap 1360906 CCATTTTGGCTAAAA GGTTCGTGG ATA CCACCAACC ATCGTGTGTATGTCA jhp1242 1360492 - 1361070 + | hypothetical protein rnhB 1361673 - 1361044 - | ribonuclease HII jhp1244 1361883 - 1361689 - | hypothetical protein fumC 1363355 - 1361964 - | fumarate hydratase jhp1246 1363530 - 1363907 + | hypothetical protein jhp1247 1363912 - 1365150 + | hypothetical protein czcB_2 1365147 - 1366172 + | cation efflux system protein TERM 1188 1366584 - 1366597 + G 71 -6.7 -4.04206 | opp_overlap 1366595 ACTTCTATTGGCTGG GCGTA TCAA TACGC TTTATCTAGCGATAG TERM 1189 1369201 - 1369215 + G 87 -6.4 -5.20333 | overlap 1369169 1369166 GGGGCATGATGAGTA GCGTTG TTT TAACGC TTTTTATTATCCCTA czcA_2 1366173 - 1369280 + | cation efflux system protein jhp1250 1369617 - 1369261 - | hypothetical protein jhp1251 1370297 - 1369611 - | hypothetical protein dnaJ_2 1371417 - 1370308 - | co-chaperone with DnaK TERM 1190 1371190 - 1371204 + g 83 -6.4 -5.05782 | overlap 1371178 1371181 GCTTTGGCTCGTGCC GGCTTG GTT TAAGCC TTTTTTGCCATACCT TERM 1191 1371761 - 1371771 + G 76 -2.4 -5.42259 | opp_overlap 1371768 1371769 AACAGCACCCTAACT AGCC AAA GGCG TTTTTTTAACGCTAG TERM 1192 1372374 - 1372360 - g 77 -7.8 -4.28361 | GCAACGCTACCAAAA CGCCCT AAT AGAGCG AGATAAGGAATTAAA jhp1253 1371542 - 1372672 + | hypothetical protein trmU 1373742 - 1372714 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1193 1372898 - 1372911 + g 71 -3.9 -4.88293 | opp_overlap 1372898 TCGCCATCTTTAAAA TCTTT CGTT AAAGA TTTGTTTTTAGCCTT TERM 1194 1373590 - 1373602 + g 79 -5.5 -4.84527 | GCCTAAAAACTCGCA CGCTT TTT GAGCG TTTTTAATGTATAAA jhp1255 1373882 - 1374643 + | hypothetical protein jhp1256 1375164 - 1374640 - | hypothetical protein jhp1257 1375594 - 1375148 - | nickel responsive regulator TERM 1195 1375978 - 1375990 + G 81 -5.5 -5.11033 | overlap 1375979 TTGTTTTTGCGGTGC TTGGC GTG GCCAG TTTTTTAGCCTTGTG exbB_2 1375917 - 1376354 + | biopolymer transport protein exbD_2 1376351 - 1376740 + | biopolymer transport EXBD protein TERM 1196 1376776 - 1376792 + GF 83 -9.5 -3.90874 | TTTTAATCTCTTTTG CCCTATA CGC TATAGGG TTTGGCTATTTTTTA tonB_2 1376706 - 1377548 + | siderophore-mediated iron transport protein TERM 1197 1378354 - 1378329 - g 77 -6.2 -4.54727 | gap 1, opp_overlap 1378336, overlap 1378330 CGCTTTAAACCAAAA CCAAGG-AGGC GGGAT GCCTGCCTTGA ATAGCTCCAAAAATA jhp1261 1377733 - 1379823 + | putative Outer membrane protein jhp1262 1380669 - 1379941 - | hypothetical protein TERM 1198 1380574 - 1380564 - G 71 -4 -4.84359 | TCACCGTGATAAAAA TGAT ATT ATCA ATCCCTAGAACGATC corA 1381632 - 1380676 - | magnesium/cobalt transporter CorA TERM 1199 1381412 - 1381397 - G 74 -4.7 -5.00616 | TGGTTGGTGAAAAAA GCGTT GATCGT AACGC TGGAGCTGTCTTCCC pgk 1382856 - 1381648 - | phosphoglycerate kinase gap_2 1383863 - 1382871 - | glyceraldehyde-3-phosphate dehydrogenase TERM 1200 1383034 - 1383022 - G 74 -4.1 -5.09762 | opp_overlap 1383024, overlap 1383024 GGCGAAGAAATAAAA TCGCT TGA AACGA GCCTTTCTTCATCAA ung 1384653 - 1383952 - | uracil-DNA glycosylase plsC 1385363 - 1384650 - | 1-acyl-SN-glycerol-3-phosphate acyltransferase jhp1268 1386513 - 1385350 - | hypothetical protein TERM 1201 1385646 - 1385632 - G 70 -2.7 -5.10208 | CAACGCCAAGAAAAA CACGC ACAAA GCGAG CAACGCCACATTAGA TERM 1202 1386502 - 1386522 + g 70 -5.5 -4.44667 | opp_overlap 1386491 1386502 TAACGATTTTTCAAA TAAAAACCC CAT GAGTTTTTA TTTCTTCTTAGGCAC prc 1387899 - 1386520 - | carboxyl-terminal protease TERM 1203 1386743 - 1386753 + g 71 -4 -4.86613 | TTTAAATCCGCTTCT TTCA AAC TGAA TTTATTTTCATTTTC TERM 1204 1386909 - 1386920 + g 76 -4.4 -5.02074 | ACACTTGCACGCTTC CCTT ACCA AAGG TTTTTTCACCGATAA TERM 1205 1387502 - 1387482 - G 72 -9.7 -3.05596 | TATCGCCTGATTTAA CCCCAGCCT TGT AAGCTGGAG TGCCCTCTAAAGGTG TERM 1206 1387790 - 1387804 + g 81 -2.7 -5.64006 | overlap 1387791 TGCGGATCTTCTTTG ACCGG CTTGA CCGGC TTTTTTTCCTTAACT jhp1270 1388981 - 1388109 - | hypothetical protein TERM 1207 1388718 - 1388737 + g 79 -3.6 -5.47218 | overlap 1388719 TTCCCTTTTTTCTTT ATCCTTAT TGTA ATAAGGAA TTTTTTTAGATAAAG TERM 1208 1388719 - 1388736 + g 71 -7.1 -3.87608 | overlap 1388718 TCCCTTTTTTCTTTA TCCTTAT TGTA ATAAGGA ATTTTTTTAGATAAA jhp1271 1390060 - 1388981 - | type II DNA modification (methyltransferase TERM 1209 1389059 - 1389075 + g 88 -8.7 -4.6759 | opp_overlap 1389058 CGCATAAAAAAATTT CCAGCCA TTA TGGTTGG TTTTATTCAAATATT jhp1272 1393681 - 1390189 - | hypothetical protein TERM 1210 1390920 - 1390910 - G 73 -6.8 -4.14392 | GTTCAATCCCTAAAA GGCT TAA AGCC CTGAATAAATCTTTA TERM 1211 1392726 - 1392743 + g 82 -6.3 -4.9725 | gap 1, opp_overlap 1392711 1392710 1392706, overlap 1392715 1392726 TCCACCACAGAATCT GGG-GTGT AGT ACACGCCC TTTTTCTCTCGCAAT TERM 1212 1392931 - 1392950 + g 71 -5 -4.59773 | TTAAAAAATCCGCCA TTTCTCTG ATCA CAGCGAAA TTTTTAGGGATAGAG nadC 1394613 - 1393792 - | nicotinate-nucleotide pyrophosphorylase TERM 1213 1394013 - 1394023 + g 72 -4.6 -4.66953 | CAATATCCGCTCCCG CGCT CAT GGCG TTTTTGGCCTCTTCA nadA 1395623 - 1394613 - | quinolinate synthetase TERM 1214 1395150 - 1395168 + g 83 -6.2 -5.07652 | CAAGCATTTATCCGG TAAAAAAA AGA TTTTTTTA TTTTGTTTTAAGGCG TERM 1215 1395579 - 1395563 - G 71 -6.5 -4.29396 | AATGAGCCACTAAAA GCGCG TCTAAAT CGCGC AACAATTCCACAATA psd 1396416 - 1395613 - | phosphatidylserine decarboxylase jhp1276 1396916 - 1396410 - | hypothetical protein jhp1277 1397480 - 1396929 - | hypothetical protein ubiA 1398300 - 1397416 - | prenyltransferase TERM 1216 1397808 - 1397788 - GR 80 -6.2 -4.81249 | CCCTAAAGCCAAAAA GACATTCC ATAAA GGAATATC CCCTAAAACCGCCAC TERM 1217 1398001 - 1397985 - GR 74 -5.1 -4.71426 | overlap 1397987 CTCCCACGAACAAAA GAGCGTT TGA AACGCTA AAAATGACCATGCCT TERM 1218 1397999 - 1397987 - GR 77 -7.7 -3.97413 | overlap 1397985 CCCACGAACAAAAGA GCGTT TGA AACGC TAAAAATGACCATGC comEC 1399558 - 1398329 - | DNA transfer protein TERM 1219 1398710 - 1398690 - G 89 -11.9 -3.61328 | opp_overlap 1398681, overlap 1398682 ACTAACACGCTTAAA GCGATCGCT TGA AACGATCGC TTGAAAAAAGAAGAA dnaB 1401099 - 1399639 - | replicative DNA helicase TERM 1220 1400618 - 1400631 + g 71 -6.7 -4.0031 | GTGATAAGATTCATT GTGCT TTCA AGCAC TTCTTTAATACCCCT jhp1281 1402504 - 1401110 - | hypothetical protein TERM 1221 1402124 - 1402112 - G 70 -3.3 -4.87318 | TTCAAAATCTAAAAA CGGCT CTA ATCCG CCCTTAAAAGCGCTC jhp1282 1403541 - 1402507 - | putative histidine kinase sensor protein TERM 1222 1402693 - 1402714 + g 74 -5.3 -4.81249 | gap 1 TTTTGTGATCTTGTC TTTAGGG-AT TTC ATACCCTAAA TTTTTCACTTTCAAA TERM 1223 1402891 - 1402906 + g 74 -4.6 -4.96388 | overlap 1402893 GTGGTAGTCTATCAT CTCGCT AAAA AGCGTG TTTTCTTTAGTAATT TERM 1224 1402957 - 1402941 - G 85 -8.7 -4.35524 | overlap 1402923 CTTTTAAATCCAAAA GCGCAAA GGA TTCGCGC TCAATGTCTTGCATC TERM 1225 1403646 - 1403667 + r 95 -5.9 -5.88471 | opp_overlap 1403645 1403646 AAGAGCCTAAATAAG TCCCTAAAA AGAG TTTGAGGGA TTTTTTTTCATAGTG jhp1283 1404316 - 1403675 - | putative transcriptional regulator jhp1284 1404425 - 1406374 + | type II DNA modification (methyltransferase TERM 1226 1407334 - 1407319 - g 71 -4.8 -4.64495 | opp_overlap 1407327 ATTGAAGAAAAACAA CTTAAA CGCT TTTAAG GAATTGAAAGATTTA TERM 1227 1408378 - 1408363 - g 79 -3.4 -5.49729 | AATGAGCGAAAAAAA TTTTAA GGAT TTAAAA GAGCATTTTCATTTA TERM 1228 1408733 - 1408719 - g 100 -5.6 -6.09888 | CTTTAAGAAAAAAAA TCGCGC AAG GCGAGA TCGATCCTTATGATA jhp1285 1406384 - 1409302 + | type III restriction enzyme R protein jhp1286 1410098 - 1409352 - | hypothetical protein TERM 1229 1409399 - 1409412 + g 79 -6.7 -4.56597 | opp_overlap 1409410 TTAAAAGTTTGGCTT CGCTT AAAA AAGCG TTTTTCAACACCGCG TERM 1230 1409423 - 1409410 - G 70 -3.1 -5.00616 | opp_overlap 1409399 GCTTCGCTTAAAAAA GCGTT TTTC AACAC CGCGCTTTTATAAGT mreB 1411145 - 1410102 - | rod shape-determining protein TERM 1231 1410745 - 1410757 + g 70 -9.1 -3.24411 | overlap 1410743 1410744 ACTTCTCTAGCTCCC GCGCT TAA AGCGC TCTCTTTAACCGCAT clpX 1412556 - 1411198 - | ATP-dependent protease ATP-binding subunit lpxA 1413370 - 1412558 - | UDP-N-acetylglucosamine acyltransferase TERM 1232 1412649 - 1412629 - G 71 -7 -4.12198 | opp_overlap 1412642 TAGAACTCTCTAAAA TAAAAGAG CAAAT CTCTTTTA CAAAAGGGTTATTGG fabZ 1413852 - 1413373 - | (3R)-hydroxymyristoyl-ACP dehydratase jhp1291 1414423 - 1414034 - | flagellar assembly protein FliW TERM 1233 1415397 - 1415372 - g 76 -3.1 -5.25803 | opp_overlap 1415388 AATGTCTATAAAAAA CGCCACAAGCC CGAG GGCGTGAAACG CTATTTAGAAAGGAT jhp1292 1414826 - 1415488 + | hypothetical protein TERM 1234 1417899 - 1417871 - g 76 -3.1 -5.27335 | GGGTTGAAAGAAAAA TTGATCGCTGCTT TTA AAGCCGGCATCAA AACCGCTCTCATTCC lon 1415531 - 1418026 + | ATP-dependent protease LA tyrA 1418035 - 1418862 + | prephenate dehydrogenase jhp1295 1420176 - 1419313 - | putative endonuclease TERM 1235 1419477 - 1419487 + g 73 -6.8 -4.29738 | opp_overlap 1419476 GGATATAAAAGCATT CGCT TTT AGCG TTTTCATAGCTATCC TERM 1236 1420331 - 1420315 - R 85 -8.1 -4.46112 | CCCTATCTAAACAAA GCTAAAA ATT TTTTAGC CCAAGCGTTTAAAAT mod_1 1422299 - 1420437 - | putative type III DNA modification enzyme (methyltransferase) TERM 1237 1421341 - 1421358 + g 73 -7.1 -4.04394 | opp_overlap 1421340 1421341 GAATTTGGTGGAAAT TGTAAAG TTCT CTTTACA TTTACTTCATTTAAA TERM 1238 1422060 - 1422071 + g 70 -3 -5.05301 | opp_overlap 1422060, overlap 1422066 TATTTTATTTTTAAA TCTT GTGA AAGA TTTTTCTAATTCTTT res_1 1424632 - 1422293 - | putative type III restriction enzyme TERM 1239 1422551 - 1422541 - G 73 -5.4 -4.56597 | GCGTTTGGGCAAAAA GGAT AAA ATCC GGCTCAAAACCTTGC bioB 1425041 - 1425889 + | biotin synthase rbn 1425889 - 1426767 + | putative ribonuclease N TERM 1240 1427204 - 1427156 - f 91 -12 -3.47349 | opp_overlap 1427156 1427157 1427203, overlap 1427157 1427162 TCTCTAAAGGCACAA GGAAAAGGGAGCTAAAGATAAA GTGCA TTTACCCTTAACTCCCCTTTCT CTTTAATAGGGAGCT TERM 1241 1427203 - 1427157 - f 100 -15.5 -2.68088 | opp_overlap 1427157 1427156, overlap 1427156 1427162 CTCTAAAGGCACAAG GAAAAGGGAGCTAAAGATAAA GTGCA TTTACCCTTAACTCCCCTTTC TCTTTAATAGGGAGC TERM 1242 1427198 - 1427162 - f 100 -11.8 -4.50661 | opp_overlap 1427157 1427156, overlap 1427157 1427156 AAGGCACAAGGAAAA GGGAGCTAAAGATAAA GTGCA TTTACCCTTAACTCCC CTTTCTCTTTAATAG TERM 1243 1429768 - 1429780 + F 70 -6.2 -4.2354 | AGGTTCTATTTCACT CCGC TCACT GCGG TTCTTTTCACCTTTC TERM 1244 1429934 - 1429916 - f 73 -8.9 -2.80344 | overlap 1429915 CTGCTACCTAAGAAC GCCTTGT CGCAT ACAAGGC TATCACTTTCTATGG jhp1300 1430913 - 1431449 + | hypothetical protein TERM 1245 1431778 - 1431754 - gf 79 -3.5 -5.40464 | CACGATAAAGAAAAA GAGCGTCTGAA ATT TTTAACCGCTC AAAATTACAACAGCA jhp1301 1431394 - 1432338 + | hypothetical protein TERM 1246 1432460 - 1432472 + F 74 -6.3 -4.45723 | ATACCCTGATTTTGA GCTTT GAA AAAGC TTTTGGTGTCTTATT jhp1302 1432520 - 1433125 + | hypothetical protein TERM 1247 1433236 - 1433219 - g 72 -8.5 -3.60431 | AAAAGGATTTTTAAA GACTTCT TAGA AGAAGTC AAGCGCCATCGCCCC TERM 1248 1433841 - 1433851 + G 73 -5.4 -4.58395 | AACCTAAACATGACC GCAT TGA ATGC TTTTTCAAAGATAAA jhp1303 1433171 - 1434403 + | hypothetical protein jhp1304 1434471 - 1435400 + | hypothetical protein jhp1305 1435587 - 1436318 + | hypothetical protein jhp1306 1436452 - 1436607 + | hypothetical protein jhp1307 1436642 - 1437364 + | hypothetical protein jhp1308 1437940 - 1437494 - | 7-cyano-7-deazaguanine reductase jhp1309 1437999 - 1438340 + | hypothetical protein miaA 1438411 - 1439244 + | tRNA delta(2)-isopentenylpyrophosphate transferase jhp1311 1439245 - 1440348 + | lipopolysaccharide biosynthesis protein TERM 1249 1441772 - 1441786 + G 87 -8.6 -4.6575 | opp_overlap 1441771 TAGCTGTTCTAAAGC GGGATT AGA AATCCC TTTTATGATTTATGT jhp1312 1440365 - 1442024 + | hypothetical protein murB 1442864 - 1442085 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1250 1442281 - 1442301 + g 91 -9.7 -4.57073 | CCCTCTAAAAGCCTG CCCGCATAA TCG TTAGGCGGG TTTTTGAAACAGCTC fliQ 1443134 - 1442868 - | flagellar biosynthesis protein FliQ fliI 1444449 - 1443145 - | flagellum-specific ATP synthase virB11_2 1445364 - 1444450 - | DNA transfer protein ileS 1448143 - 1445381 - | isoleucyl-tRNA synthetase TERM 1251 1446456 - 1446466 + g 82 -8.2 -4.60487 | AAAACCACATCGCTA GGGC TTT GCCC TTTTTCCCCATGATA jhp1318 1448417 - 1448163 - | hypothetical protein TERM 1252 1448740 - 1448713 - g 80 -6.2 -4.69559 | opp_overlap 1448716 1448720, overlap 1448715 AAACCCCAAAATAAA GCTCAAAGACCC TAAG GGGCCTTTGTTC ATGCTAGGGAGCAAT TERM 1253 1449004 - 1449028 + G 85 -5.7 -5.27335 | opp_overlap 1449006, overlap 1449006 ATTGAGCTTGATTAA AACCCCTAGAG GCT TTTTAGGGGTG TTTTTATTTGACAAC TERM 1254 1449006 - 1449026 + G 82 -8.3 -4.27026 | opp_overlap 1449006, overlap 1449004 TGAGCTTGATTAAAA CCCCTAGAG GCT TTTTAGGGG TGTTTTTATTTGACA jhp1319 1448519 - 1449139 + | hypothetical protein jhp1320 1449556 - 1449374 - | putative histidine-rich metal-binding protein TERM 1255 1449584 - 1449603 + r 75 -5 -5.09259 | opp_overlap 1449584 1449579, overlap 1449579 1449586 GATTAAAAATTTAAA TTCTAGCT CACT GGCTAGGA TTTTATTTTACAGTA TERM 1256 1449811 - 1449796 - R 90 -8.2 -4.92239 | TTAAAAAGCCAAAAA GCAGCC CTAA GGCCGC CCCATAAACGCCCCA jhp1321 1450061 - 1449828 - | putative histidine and glutamine-rich metal-binding protein TERM 1257 1450571 - 1450597 + G 74 -5.2 -4.76088 | opp_overlap 1450572, overlap 1450572 ATTGGTAGAAAAAGA CGCTCTTTTTTT AAA AGAAGAAGAGCC TTATTTTTTGATTTC TERM 1258 1450572 - 1450596 + G 70 -8.7 -3.43212 | opp_overlap 1450572, overlap 1450571 TTGGTAGAAAAAGAC GCTCTTTTTTT AAA AGAAGAAGAGC CTTATTTTTTGATTT TERM 1259 1450767 - 1450779 + G 70 -3.3 -4.97158 | opp_overlap 1450767, overlap 1450762 TTGGCTCACACAATA GGGAA TGC TACCC TTTTGTTTGATGTGC TERM 1260 1450897 - 1450871 - g 71 -3.8 -4.86731 | gap 2, opp_overlap 1450871 GCCGCTGAAAGAAAA GGCG-TTG-GCT TCATT AGCTCAAGCGCC ATTTTTTGAAGAAGC TERM 1261 1451022 - 1451002 - g 93 -6.9 -5.48303 | opp_overlap 1451002 1451007 1451008 ACAATCTTAAAAAAA GCGTTTCTT ATA AAGAAAAGC TTGATAAGGTGTTAG ksgA 1450314 - 1451129 + | dimethyladenosine transferase TERM 1262 1451307 - 1451290 - g 80 -6.3 -4.67904 | CACCAACCGCAAAAA GCGTTTC AGAG AAAACGC ACAAAAAAACGCAGA TERM 1263 1451370 - 1451360 - g 80 -4.6 -5.31275 | TCGCACCATAAAAAA GAGC ATC GCCC CAACAAAAAACCAAA TERM 1264 1452613 - 1452627 + G 79 -5 -5.14563 | CAATGAAGCGAGCGT TTCAGC GGT GTTGAA TTTTTTGATCAAAAA TERM 1265 1453044 - 1453022 - g 72 -3.4 -5.05606 | opp_overlap 1453025 1453038, overlap 1453025 1453027 GTGAATAAAAACAAA CAAGCGCTTT TAG AAAGCTCTCA ATTTTCCAGTTTAGG TERM 1266 1453041 - 1453025 - g 71 -5.1 -4.5815 | opp_overlap 1453025 1453038, overlap 1453022 1453027 AATAAAAACAAACAA GCGCTTT TAG AAAGCTC TCAATTTTCCAGTTT jhp1323 1451180 - 1453258 + | hypothetical protein jhp1324 1453242 - 1454231 + | hypothetical protein TERM 1267 1455098 - 1455080 - g 72 -3.2 -5.0133 | overlap 1455082 GATTGCGCTAAAAAA CTTTTAAA ACT TTTAAACG GCATTAAATCCAAAG jhp1325 1454228 - 1455301 + | hypothetical protein TERM 1268 1455567 - 1455590 + T 86 -9.6 -4.05788 | GTATTAGCCAAAGTT CCCCTGAGTT GAAA AGCTTAGGGG TTTCCTTTAAAAAGC TERM 1269 1455888 - 1455911 + T 79 -8.2 -4.06055 | TTTTCTAAGAGCGTT CCCTTAAGTT TAAA AGCTTAGGGG TTTCCTTTAAAAAGT jhp1326 1458462 - 1456084 - | hypothetical protein purU 1459452 - 1458571 - | formyltetrahydrofolate hydrolase sppA 1460333 - 1459455 - | putative protease IV TERM 1270 1459532 - 1459543 + g 76 -3.6 -5.24531 | opp_overlap 1459530 CTTTTTCAATGAAGC GCTC CATA GGGC TTTTTTCTAGCCAAT TERM 1271 1460095 - 1460110 + g 75 -5.4 -4.75063 | opp_overlap 1460095 ATCAAAAGTAAAACG CCCTTA ATGC TAGGGG TTTTTAGGATTTTAT jhp1329 1460404 - 1460664 + | hypothetical protein TERM 1272 1460720 - 1460741 + F 86 -5.9 -5.42259 | overlap 1460721 TTGCAAGTTTTTACG CCCTTTTTG TTTG CAAAAAGGC TTTTTTTAGCGGTGA TERM 1273 1460721 - 1460740 + F 83 -9.4 -3.84633 | overlap 1460720 TGCAAGTTTTTACGC CCTTTTTG TTTG CAAAAAGG CTTTTTTTAGCGGTG jhp1330 1460871 - 1461434 + | hypothetical protein jhp1331 1461570 - 1462055 + | hypothetical protein jhp1332 1462065 - 1462490 + | hypothetical protein TERM 1274 1462675 - 1462665 - T 71 -5.4 -4.58698 | GCAAATCAAAAACAA GCAA GAA TTGC AATCATGAGATAAAG TERM 1275 1462964 - 1462943 - T 74 -2.3 -5.52909 | TAAGATTTAAAAAAA GAAAGAATA AGTT CAATCTTTC AAAACTAAGCAACAA TERM 1276 1463009 - 1463034 + T 89 -9.2 -4.52589 | AGGTAATACTCTTTG GCTTTTAACA AGCGAA TGTTAAAAGC TTTTCTCTAGAAAGG TERM 1277 1463078 - 1463061 - T 74 -9.1 -3.07291 | opp_overlap 1463061, overlap 1463051 1463048 AAGGAGGTGATCCAA CCGCAGG TTCA CCTACGG TTACCTTGTTACGAC TERM 1278 1464584 - 1464607 + T 95 -12.6 -3.63627 | TTTGTTTTTTGATAG GCTGTTGTTA TTCC TAACAACAGC TTTAGCGTATCACAA jhp1333 1465822 - 1465043 - | hypothetical protein TERM 1279 1466267 - 1466221 - g 75 -9.4 -3.30159 | overlap 1466222 1466230 CGAAGTGGCTCATAA CCCCAACAAGCACCAAAGAG GCTCTAT CTCTATGGCGCATGCCGGGA GAGACACAGGGGGGA TERM 1280 1466266 - 1466222 - g 76 -10.7 -2.57881 | overlap 1466221 1466230 GAAGTGGCTCATAAC CCCAACAAGCACCAAAGAG GCTCTAT CTCTATGGCGCATGCCGGG AGAGACACAGGGGGG ppiA 1465946 - 1466434 + | peptidyl-prolyl cis-trans isomerase csrA 1466452 - 1466682 + | carbon storage regulator TERM 1281 1466915 - 1466901 - g 76 -2.2 -5.43866 | CAAGTTTTAAAAAAA TTTTTA GTG CAAAAA AATTTTTCTCATTCT jhp1336 1466679 - 1467503 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase smpB 1467481 - 1467939 + | SsrA-binding protein exbB_3 1467942 - 1468394 + | biopolymer transport protein exbD_3 1468405 - 1468806 + | biopolymer transport protein rpmH 1468878 - 1469012 + | 50S ribosomal protein L34 TERM 1282 1469442 - 1469428 - gf 74 -4.2 -5.10077 | AAAGATTTGAAAAAA GGAATG ACT CATACC CATGCGAAACAATAA rnpA 1468972 - 1469457 + | putative ribonuclease P protein component jhp1342 1469444 - 1469800 + | hypothetical protein TERM 1283 1471166 - 1471199 + G 100 -13.4 -4.20136 | GCTCAGAGTGGGTTT TATGGATCCATGAT TTATCC ATCATGGATCCGTA TTTCATTTTACCGCT jhp1343 1469806 - 1471455 + | putative inner membrane protein translocase component YidC TERM 1284 1472087 - 1472070 - gf 73 -7.7 -3.66921 | AAGCGCAACTCCAAA GCACGAT CATG ACCGTGC ATGAGGTGGGTAAGG jhp1344 1471469 - 1472245 + | hypothetical protein TERM 1285 1472656 - 1472644 - gf 74 -7.7 -3.92324 | TTTGTGAAGATGAAA GCGTT TTA AACGC TCTAGCCAGGCAGCT trmE 1472205 - 1473590 + | tRNA modification GTPase TrmE TERM 1286 1473899 - 1473876 - g 79 -5.2 -5.02231 | opp_overlap 1473876 1473894, overlap 1473878 1473894 1473895 CAAAAACACCAAAAA GACGGCTTTT TCAT AGAAGCCGGC TTTGAAACCGGGCTA jhp1346 1473792 - 1476026 + | putative Outer membrane protein TERM 1287 1476129 - 1476150 + T 86 -5.7 -5.34365 | overlap 1476131 TGTGCGCTGTTTTAA GCGTGGGCG TTAT CGCTCGCTC TTTTTGTTCTTGTAA TERM 1288 1476131 - 1476148 + T 74 -6.9 -4.28653 | overlap 1476129 TGCGCTGTTTTAAGC GTGGGCG TTAT CGCTCGC TCTTTTTGTTCTTGT TERM 1289 1476403 - 1476419 + T 74 -3.8 -5.28166 | CGCTTGCGTAGGCTC CTAAAA AAAGA TTTTAG TTTTTGTTAATTTTA jhp1347 1477533 - 1476622 - | hypothetical protein TERM 1290 1476819 - 1476829 + g 74 -4 -5.01811 | CATTAGCACTGTCCG TGAA AAC TTCA TTTTTGATTTGATAA TERM 1291 1477412 - 1477438 + g 77 -5.1 -4.92812 | opp_overlap 1477412, overlap 1477414 GAAGTGGCTGAACCA CTCCCATAAAG ATAGC CTTTTTGGGCG TTTGTTTTGTTATAG jhp1348 1477884 - 1477543 - | hypothetical protein lpp20 1478419 - 1477892 - | lipoprotein jhp1350 1479075 - 1478443 - | hypothetical protein jhp1351 1479748 - 1479434 - | thioredoxin TERM 1292 1479694 - 1479708 + g 91 -7.8 -5.28778 | CCACATTGACCACTA CCGCTT GAT GAGCGG TTTTTTCTGCGTAAT jhp1352 1480592 - 1479804 - | hypothetical protein dnaE 1484209 - 1480574 - | DNA polymerase III subunit alpha TERM 1293 1484012 - 1484029 + g 73 -2 -5.19212 | gap 1, overlap 1484006 CGCTTCCATGCCGAT GATAGGC TTAAT GCCT-TC TTTTTTCATGCTCGT jhp1354 1484358 - 1485410 + | cytochrome c551 peroxidase TERM 1294 1485432 - 1485391 - T 74 -5.9 -4.62984 | opp_overlap 1485403 TGATGACAGACAAAA CCCCTAAACCCTCTTTTTG ATTT CAAAAAGTCCTTTTAGGGG GGCTTTGATTATGAA TERM 1295 1485509 - 1485492 - T 86 -9.9 -3.63843 | opp_overlap 1485490, overlap 1485490 AACCAATGATAAAGA GCTTGAC TTTA GTCAAGC GATAATTTCTTAAAA TERM 1296 1485654 - 1485664 + T 77 -4 -5.46698 | TTTTAATCCCTTTAT CATT TAG AATG TTTTTTGATTTTAGA jhp1355 1486292 - 1485705 - | putative motility protein jhp1356 1486988 - 1486311 - | hypothetical protein TERM 1297 1486337 - 1486349 + g 72 -3.3 -5.14563 | ACGGGCTTACGCTTT GCGCT TCA ACCGC TTTTTTAATCAAAGA TERM 1298 1486603 - 1486593 - G 79 -5.4 -4.89567 | overlap 1486601 TTCTAAAAGAGAAAA CGAT AAA ATCG TAAAACGAACCGCAT TERM 1299 1486611 - 1486601 - G 75 -5.4 -4.70046 | overlap 1486593 GAGAAAACGATAAAA TCGT AAA ACGA ACCGCATAAGTGGGC jhp1357 1487806 - 1486991 - | hypothetical protein jhp1358 1488576 - 1487791 - | ABC transporter ATP-binding protein jhp1359 1489709 - 1488576 - | hypothetical protein jhp1360 1489843 - 1490538 + | putative Outer membrane protein ilvE 1491565 - 1490543 - | branched-chain amino acid aminotransferase TERM 1300 1491220 - 1491195 - G 70 -5.4 -4.32857 | opp_overlap 1491216, overlap 1491180 1491181 1491216 GGGCGCAAATACAAA CTCGCCCC ACTTTTGTAA GGAGCGAG CCATTTTTGATTCGC jhp1362 1492362 - 1491616 - | putative Outer membrane protein polA 1495169 - 1492476 - | DNA polymerase I TERM 1301 1494144 - 1494131 - G 84 -6.7 -4.94992 | opp_overlap 1494131 1494126 1494124, overlap 1494116 CCAAACGCATAAAAA CCCTA GCGT TAGGG TTTTCTAATTTTTCT TERM 1302 1494131 - 1494144 + g 81 -6.7 -4.73912 | opp_overlap 1494116 1494131, overlap 1494126 1494124 CCAAACGCATAAAAA CCCTA GCGT TAGGG TTTTCTAATTTTTCT TERM 1303 1494463 - 1494481 + g 83 -9 -4.11692 | overlap 1494459 GCGCTTCCTTTGTCT TGTATCAA GGC TTGATACA TTTTAGGGCTGAGTA TERM 1304 1494726 - 1494710 - G 80 -6.5 -4.72272 | overlap 1494712 TTTTGCCATCAAAAA GCGCGAT TTT ATCGCTC AAAAGCTGGTTAAAA jhp1364 1496453 - 1495233 - | putative type II restriction enzyme TERM 1305 1496013 - 1495993 - G 71 -4.8 -4.58773 | gap 1, opp_overlap 1496001, overlap 1495999 TCCATGAAATCAAAA TCAATACCC TCAA GGGT-TTGA GTGTTAGCGGTGGGT TERM 1306 1496347 - 1496373 + g 75 -10.2 -3.21912 | overlap 1496348 CCCTTATGATTGATG TGGCGTTTTTGA ATG TCAAAATCGCCG TTACTCGCTTCAAAC TERM 1307 1496348 - 1496372 + g 79 -11.5 -2.52933 | overlap 1496347 CCTTATGATTGATGT GGCGTTTTTGA ATG TCAAAATCGCC GTTACTCGCTTCAAA jhp1365 1498486 - 1496450 - | putative type II DNA modification enzyme (methyltransferase) TERM 1308 1497542 - 1497553 + g 75 -5.8 -4.66418 | opp_overlap 1497534 CTTCAAACGGCTTTC GCCA TTAA TGGC TTTGTTGTTGTTTTC TERM 1309 1498144 - 1498126 - G 71 -6.8 -4.07568 | CCGTGTGGTGTAAAA TCGCATTA GCG TAATGCAA AGCCCCATTTAGGGC jhp1366 1499093 - 1498518 - | hypothetical protein TERM 1310 1499027 - 1499006 - G 71 -6.7 -4.08216 | gap 1 TCACGCCCTCTAAAA CCCTTAA-CT TTA AGCTTAAGGG CAAATCGTTCAGGCA tdk 1499656 - 1499081 - | thymidylate kinase TERM 1311 1499159 - 1499170 + g 80 -4.4 -5.18726 | opp_overlap 1499159 GTCTAATTCCAAAAC TTCG CACC CGAA TTTTTCTTGTAACGC coaD 1500133 - 1499660 - | phosphopantetheine adenylyltransferase ubiD 1500696 - 1500133 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 1312 1500676 - 1500643 - G 81 -7.3 -4.58283 | gap 1, overlap 1500645 TAATTTCTCTAAAAA CCGCAAGGCTAG-GGG TAT CCCGCTCGCCCCGCTG ATGCCTAAAACTAAT flgA 1501362 - 1500706 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 1313 1501030 - 1501041 + g 73 -2.2 -5.19212 | AGTGTTGTTGGCGGT GATG TTCT CGTC TTTTTTAATCGTGCT rep 1503404 - 1501359 - | putative ATP-dependent DNA helicase jhp1372 1505929 - 1503404 - | hypothetical protein TERM 1314 1505303 - 1505318 + g 70 -3.2 -4.86731 | opp_overlap 1505294 1505303, overlap 1505303 AACTAACGCATCAAT CGCG CTCACGCT CGCG TTTTCTTTAGAAGCG TERM 1315 1505853 - 1505865 + g 72 -3.3 -5.02421 | overlap 1505853 1505853 ATTTTAGAATGAATG CCCTT TAG GGGGG TTTCTTTTTCGTTTT serS 1507186 - 1505939 - | seryl-tRNA synthetase jhp1374 1507984 - 1507187 - | hypothetical protein TERM 1316 1507815 - 1507829 + g 85 -11.4 -3.32647 | AAAAACCCAATCGCT CGCGCA GAC TGCGCG TTAATCTCATTCACA jhp1375 1508248 - 1507988 - | hypothetical protein TERM 1317 1508194 - 1508204 + g 79 -3.2 -5.40474 | overlap 1508185 TAGGGGCGTTTTTAG CGTT TTT AGCG TTTTTTTGAGGGGCT ubiE 1508998 - 1508258 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 1318 1508946 - 1508964 + g 95 -6.1 -5.5604 | TAAGAGCTGGCTATA TCATCAA ACATG TTGATGA TTTTTTCTTGCTTGA jhp1377 1509453 - 1509007 - | hypothetical protein jhp1378 1510035 - 1509463 - | hypothetical protein jhp1379 1511152 - 1510022 - | hypothetical protein TERM 1319 1510610 - 1510595 - G 81 -6.8 -4.77698 | opp_overlap 1510595 TAAGATGAAAATAAA CACGCT AGAG AGCGCG TAATTCAAATACCCC jhp1380 1512246 - 1511149 - | hypothetical protein TERM 1320 1511931 - 1511911 - G 72 -4.7 -4.77567 | opp_overlap 1511911 AGCGTTATAATAAAA GGGCAAA TCCACTT TTCGCCC CATTTTGATTTTTCT jhp1381 1513247 - 1512258 - | hypothetical protein TERM 1321 1512565 - 1512555 - G 73 -8.2 -3.86916 | GAGCACCACAGGAAA GCCC TTA GGGC TAAGCTCGCCACCGC jhp1382 1514791 - 1513259 - | lipase-like protein TERM 1322 1514041 - 1514066 + g 75 -9.9 -3.43689 | opp_overlap 1514052 TTTGCCCTACTTTTT GCATTTTCAAA GCGT TTTGGAAATGC TTATAATGGCCTTTT jhp1383 1516113 - 1514788 - | hypothetical protein TERM 1323 1514821 - 1514832 + g 70 -5.8 -4.46212 | CTGATCTTGTTTAAC CGCT TTCA AGCG TTTTATCCTGGCCCC TERM 1324 1516065 - 1516052 - G 87 -3.1 -5.75599 | GAAAGCACAAAAAAA GCGTT CAAC AACAC CAGTAAAAAAGCAAC jhp1384 1517844 - 1516243 - | phosphate permease TERM 1325 1517329 - 1517315 - G 73 -2.1 -5.24531 | ATGCCGGATAAAAAA TGCCA ATTGA TAGCA GACATTCCAGCTGCT jhp1385 1517985 - 1518254 + | NifU-like protein TERM 1326 1518350 - 1518360 + G 73 -2.4 -5.28826 | AGCCCATTACGCTGA AGCG TTG CGCC TTTTTTCTGAAGTTT jhp1386 1518267 - 1518878 + | hypothetical protein TERM 1327 1519238 - 1519223 - g 74 -4.6 -4.98061 | ACACATCAAAGAAAA GGGCTT GACC ACGCCC ACTCTTTTAGAGCTT murE 1518882 - 1520225 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase tal 1520228 - 1521178 + | transaldolase TERM 1328 1521183 - 1521212 + F 73 -4.4 -5.07652 | overlap 1521198 GCAGTTTTTGATTTT TAAGGGTTTTTT GGATAG AATAAGCCCTTA TTTTATTTTAAAGGA TERM 1329 1521476 - 1521460 - g 81 -2.9 -5.6473 | opp_overlap 1521461, overlap 1521461 1521472 AGAATACCAAAAAAA CCCCGTT ACT AACGAGC TTATCCATGTGGATT rplY 1521233 - 1521769 + | 50S ribosomal protein L25/general stress protein Ctc TERM 1330 1521857 - 1521881 + G 83 -7.2 -4.73341 | gap 1 GGTTTTGATATTTTA GATTC-GCTCG TTAG CGAGCTGGATC TTTCTTTCATTTTTT pth 1521779 - 1522339 + | peptidyl-tRNA hydrolase TERM 1331 1522539 - 1522556 + G 75 -2.7 -5.23292 | gap 1, overlap 1522539 1522541 ACACCTTGCCCATTT CC-TTGCT TTT AGCGATGG TTTTATTTTATATCA TERM 1332 1522681 - 1522698 + G 73 -5.5 -4.64844 | CACGGCTGTTTATGT GGGGTTG AACG CGACTCC TTTTGTGTATATGGA TERM 1333 1523187 - 1523205 + G 77 -6 -4.57837 | overlap 1523181 TTTTTGTGCCGTTTT TAAGCGTT TTA ATCGCTTA TTTTTCGCCCAGTCT jhp1391 1522349 - 1523416 + | hypothetical protein TERM 1334 1523661 - 1523682 + G 74 -4.5 -5.00616 | overlap 1523665 ACAGTGGGGTTGAGA TTATTCAAG ATGT CTTGATTAA TTTTTTAGAAAAGGG jhp1392 1523537 - 1524457 + | hypothetical protein jhp1393 1524624 - 1524704 + | hypothetical protein TERM 1335 1524714 - 1524699 - T 80 -7.6 -4.33754 | opp_overlap 1524699 AATGACAACCCAAAA GCTTGA CAAA TCAAGC TTTCATATATATATA TERM 1336 1524699 - 1524714 + T 74 -7.6 -3.92267 | opp_overlap 1524699 AATGACAACCCAAAA GCTTGA CAAA TCAAGC TTTCATATATATATA jhp1394 1525934 - 1524768 - | putative Outer membrane protein TERM 1337 1526272 - 1526258 - g 77 -10 -3.38609 | overlap 1526245 AAGCGAATACAGGAA TCGCTC AAA GAGCGA TCAAAATCATGCCTT TERM 1338 1526387 - 1526413 + G 78 -3 -5.50723 | TTCAAAAGATACTCA TGCTTAAAGTGA TCT TAGCGTTAAGCA TTTTTCTTTTGGTGC jhp1395 1526113 - 1526550 + | hypothetical protein fixI 1528913 - 1526547 - | putative component of cation transport for cbb3-type oxidase TERM 1339 1526719 - 1526732 + g 81 -6.7 -4.83169 | TGATAGACTTTTTGA GCGTT ATGA AACGC TTTTTCTAGCAAACT TERM 1340 1526842 - 1526819 - G 74 -6 -4.4784 | gap 1, opp_overlap 1526815 CAAACCCCAAAGAAA CGCTCGC-TTG TTT CAAGGCCAGCG CATCATTATTGCCAT TERM 1341 1528423 - 1528433 + g 81 -6.8 -4.7416 | opp_overlap 1528422, overlap 1528430 AAAGTGAGCAAGTAG GAGC GTT GCTC TTTTTGGGCTTTTAG TERM 1342 1528554 - 1528577 + g 76 -4.6 -5.01732 | gap 1 CACGATTTGCAAGTG GTGGGTGGTGA AAT TCA-CGCTCAC TTTTTTAACCCCCTT jhp1397 1529639 - 1528923 - | hypothetical protein ribD 1530655 - 1529621 - | putative riboflavin-specific deaminase TERM 1343 1530043 - 1530057 + g 93 -10 -5.02074 | CCGCTCGCTGGTTGT GCGTGA AAA TCACGC TTTTTTGCCCAGTGA TERM 1344 1530486 - 1530514 + g 83 -5.3 -5.33866 | AACGCCGATTTAGCA GCCAAGACTTC TGCATGC GGGGTTTTGGC TTTTTTATGGGTTTC gltS 1531885 - 1530659 - | Sodium/glutamate symporter jhp1400 1531971 - 1533170 + | hypothetical protein jhp1401 1534556 - 1533180 - | ferrodoxin-like protein TERM 1345 1534056 - 1534030 - G 85 -7.4 -4.92239 | gap 1, opp_overlap 1534031, overlap 1534031 CTAAAAAGCCAAAAA CCCATAGCGAT AGGGTG ATCGCTA-GGG TTTTTAAGATACATA TERM 1346 1534031 - 1534056 + g 81 -7.6 -4.62783 | opp_overlap 1534030 1534031 TAAAAAGCCAAAAAC CCATAGCGAT AGGGTG ATCGCTAGGG TTTTTAAGATACATA TERM 1347 1535144 - 1535168 + G 85 -5.7 -5.3236 | CGCTAGCATTCTAGG GGTAGGCACAG CGA CTGTTCTTATC TTTTTTGTGCCTTAT jhp1402 1534662 - 1535324 + | putative glycerol-3-phosphate acyltransferase PlsY folB 1535321 - 1535674 + | dihydroneopterin aldolase jhp1404 1535658 - 1535984 + | hypothetical protein TERM 1348 1536240 - 1536224 - g 81 -6.6 -4.68103 | GCAAGCTCAAGAAAA TACCCA CACTT TGGGTA AGGTAACCACTAAGG frpB_3 1536153 - 1538792 + | putative IRON-regulated outer membrane protein TERM 1349 1538800 - 1538815 + F 80 -6.2 -4.87318 | opp_overlap 1538800 AGTTCTAAAGTTAAA GAAATC TTAG GATTTC TTTTTGAATTTTGAA selA 1539018 - 1540190 + | selenocysteine synthase nusA 1540286 - 1541473 + | transcription elongation factor NusA TERM 1350 1541657 - 1541671 + G 78 -7.2 -4.41348 | opp_overlap 1541657 TCATCACGCCTAAAA TCTCTA ACT TAGAGA TTTATTTACGCAACG TERM 1351 1541671 - 1541657 - g 73 -7.2 -4.12188 | opp_overlap 1541657 TCATCACGCCTAAAA TCTCTA ACT TAGAGA TTTATTTACGCAACG jhp1408 1541530 - 1542213 + | hypothetical protein TERM 1352 1542740 - 1542754 + T 74 -7.1 -4.07246 | TTAAGCCAAAGGTTT CCCCT ATTTA AGGGG TTTCCTTTAAGGTAA TERM 1353 1543031 - 1543048 + T 93 -11.3 -3.6761 | opp_overlap 1543029, overlap 1543031 TAGTTTTTCAAGAGT CCCCCTT TTTT AAGGGGG TGTTTCTTAGACAAA TERM 1354 1543474 - 1543449 - T 77 -8.3 -3.92577 | gap 1, opp_overlap 1543447 1543451, overlap 1543447 TAATTCTTAAAAAGA GTTG-CCCCCTA GAT TAGGGGGTCATC CTTAAGTGGGAAATC TERM 1355 1543451 - 1543472 + T 74 -9.5 -2.75064 | gap 1, opp_overlap 1543449 1543447, overlap 1543447 ATTCTTAAAAAGAGT TG-CCCCCTA GAT TAGGGGGTCA TCCTTAAGTGGGAAA jhp1409 1547254 - 1543496 - | putative type II DNA modification enzyme (methyltransferase) TERM 1356 1544175 - 1544163 - G 70 -7.7 -3.63744 | opp_overlap 1544163, overlap 1544161 TTCCCTCTTAAAATA GGCTT AAT AAGCC TCTCTGTGCGCTCCC TERM 1357 1544387 - 1544372 - G 85 -7.6 -4.85782 | opp_overlap 1544371 GTTGGCAAAAATAAA GCTTTC TGTT GAAAGC GCATTTTGTTTCATG TERM 1358 1546202 - 1546217 + g 71 -4.8 -4.57791 | AGAATTCAAATAAGG GATTTT TCCT AAAATC TTGTTTTCTTTAATT TERM 1359 1546377 - 1546363 - G 85 -8.6 -4.40894 | CAAACGAGATCAAAA GGCTTT CTA AAAGCC GTAAAAACAAGATGC TERM 1360 1546938 - 1546924 - G 70 -2.8 -5.06052 | opp_overlap 1546924, overlap 1546919 CTAAAAAATACAAAA CCATTT GAC AAAAGG CTTTACTGAGCGGGT res_2 1550285 - 1547376 - | type III restriction enzyme TERM 1361 1550077 - 1550092 + g 74 -4.6 -4.88687 | AACGACTGATTAATC CCCACG CTCC CCTGGG TTATTTTTTGTTTCG TERM 1362 1550148 - 1550138 - G 73 -5.4 -4.63932 | TATTTTCTAATAAAA GATC TTT GATC GCCCCTATTTCAAAA mod_2 1552214 - 1550288 - | type III DNA modification enzyme (methyltransferase) recG 1554137 - 1552266 - | ATP-dependent DNA helicase TERM 1363 1552831 - 1552849 + g 78 -7.5 -4.431 | ATGACTTGGTGGTTT TTAGCGA TTTCT TCGCTAA TTTTCTCCATCACTA TERM 1364 1553840 - 1553830 - G 73 -6.8 -4.2679 | opp_overlap 1553830 TAAGCTTGATTAAAA GAGC TTT GCTC TAATTTGCCATAAAT TERM 1365 1554455 - 1554443 - g 83 -4.9 -5.19998 | ATAACGAAAATAAAA TTGAT GAA ATCAA TAATGAAGAAAACGC jhp1413 1554214 - 1554561 + | hypothetical protein jhp1414 1554565 - 1555200 + | hypothetical protein exoA 1555949 - 1555197 - | exodeoxyribonuclease jhp1416 1557568 - 1556129 - | hypothetical protein TERM 1366 1556700 - 1556718 + g 72 -3.1 -5.07652 | overlap 1556702 1556715 GAGATTTTAGTATAG GGGGTAA TGATT TTACCGC TTTTATTTTCAGCGG dnaA 1559162 - 1557789 - | chromosomal replication initiation protein TERM 1367 1558015 - 1558029 + g 76 -2.1 -5.40072 | gap 1, overlap 1558015 1558016 TACACGACTAATTTT C-TCGC TAAA GCGACG TTTTTTTGGCGCGAA jhp1418 1559315 - 1559857 + | hypothetical protein jhp1419 1559902 - 1560141 + | hypothetical protein TERM 1368 1560215 - 1560184 - g 78 -4 -5.29782 | gap 1 GATAGCGAGAAAAAA TCC-ATTCTTTTA GAGGGAT TAAAAGAATTGGA ATACAGAGGTTATGA TERM 1369 1560556 - 1560545 - g 70 -5.8 -4.35885 | ATTTATTAGAAGAAA CGCT TAAA AGCG AGGGCGATTTATTGA glmS 1560142 - 1561935 + | D-fructose-6-phosphate amidotransferase TERM 1370 1562284 - 1562298 + G 70 -3.6 -4.88736 | opp_overlap 1562284 CGAATTTAGAAAGAG CTAAAG AGT TTTTAG TTTTTGTAGATGATG thyX 1561959 - 1562585 + | FAD-dependent thymidylate synthase TERM 1371 1562851 - 1562874 + T 86 -9.6 -4.05788 | GTATTAGCCAAAGTT CCCCTGAGTT TAAA AGCTTAGGGG TTTCCTTTAAAAAGC hsdS_3a 1564790 - 1562916 - | putative type I restriction enzyme (specificity subunit) TERM 1372 1564316 - 1564336 + g 72 -3.4 -5.1356 | GGATTAGTAAATTTT TAATAACA TTTTT TGTTATTG TTTTTGTTGCTGAAC TERM 1373 1564503 - 1564491 - G 73 -7.7 -3.82117 | opp_overlap 1564481, overlap 1564480 1564489 TTTAGGCATAAAATA TGCTG TTC CAGCA TTGGCAATTTTATTA TERM 1374 1564659 - 1564671 + g 74 -4.9 -4.72846 | ATCTACATTTTTTAA TAATG TTA CATTA TTTTTAAGTATCTCA hsdM_3 1567234 - 1564787 - | Type I restriction enzyme modification subunit TERM 1375 1566744 - 1566733 - G 75 -5.8 -4.81863 | AAAGGGACAATAAAA GCGA AACT TCGC TAGGGGTGTAAAACT TERM 1376 1567753 - 1567737 - g 75 -3 -5.1925 | gap 1 CTAGAATTGAAAAAA TCCA-GC GTGA GCGTGGA AAGCGGTATTAGGCA TERM 1377 1569058 - 1569046 - g 71 -4.9 -4.64334 | overlap 1569035 AAGCCCTTAATAAAA TCAAA GAG TTTGA AGAAGAAGTCAAAAA TERM 1378 1570208 - 1570190 - g 100 -3.2 -6.20267 | overlap 1570191 TCAAAAAGAAAAAAA CCTTAAAA TCG CTTTAAGA AAAATCATAAACGAT hsdR_3 1567305 - 1570280 + | type I restriction enzyme restriction subunit TERM 1379 1570412 - 1570428 + G 77 -8.7 -3.90291 | opp_overlap 1570411 1570408 CTAGCTCTAAACGAT GAGAGCC TTA GGCTTTC TTTGATTAAAAGACT jhp1425 1570280 - 1570987 + | hypothetical protein fecA_3 1573606 - 1571081 - | putative IRON(III) dicitrate transport protein TERM 1380 1574027 - 1574066 + r 84 -5.2 -5.5112 | opp_overlap 1574025 1574039, overlap 1574025 1574039 TGTGTATATACCATT TTAGTCTTAAAATCCTTT GTCA AAAGGATTTTTGCACTGA TTTTTTCTTGGTGCC TERM 1381 1574039 - 1574054 + r 76 -6.2 -4.652 | opp_overlap 1574039, overlap 1574027 ATTTTAGTCTTAAAA TCCTTT GTCA AAAGGA TTTTTGCACTGATTT rocF 1575104 - 1574136 - | arginase TERM 1382 1574703 - 1574688 - G 70 -9 -3.13109 | opp_overlap 1574699, overlap 1574687 1574699 GACACGATTTAAAAC CATGCC TAAA GGCATG CCGTGGATATGCTTT ald 1575308 - 1576450 + | L-alanine dehydrogenase jhp1429 1576698 - 1577795 + | zinc-dependent alcohol dehydrogenase TERM 1383 1577803 - 1577823 + F 91 -8.3 -5.00616 | opp_overlap 1577806, overlap 1577806 AGAAATAAACCCCAA AAACCCCTA AAT TAGGGGTTC TTTTTTCCAACAAAA TERM 1384 1577820 - 1577806 - f 93 -10 -4.7339 | opp_overlap 1577803 1577806 AATAAACCCCAAAAA CCCCTA AAT TAGGGG TTCTTTTTTCCAACA TERM 1385 1577806 - 1577820 + F 93 -10 -4.61482 | opp_overlap 1577806, overlap 1577803 AATAAACCCCAAAAA CCCCTA AAT TAGGGG TTCTTTTTTCCAACA jhp1430 1577928 - 1578776 + | hypothetical protein jhp1431 1578809 - 1579690 + | hypothetical protein jhp1432 1580429 - 1579701 - | hypothetical protein jhp1433 1580545 - 1581468 + | hypothetical protein recN 1581506 - 1583074 + | DNA repair protein(recombination protein N) TERM 1386 1583919 - 1583902 - g 72 -3.5 -5.06961 | AGCAAGAAAAAGAAA CAAAAAT CGCA ATTCTTG TATTTAGAAGAAGAG jhp1435 1583077 - 1584384 + | fibronectin/fibrinogen-binding protein jhp1436 1584403 - 1584699 + | hypothetical protein TERM 1387 1585352 - 1585330 - g 88 -4.2 -5.72118 | overlap 1585332 1585334 AAAAAAGATAAAAAA GATCTAGAAT ATT ATTCTAAAGC TTGCGAGTTAAATAA TERM 1388 1585350 - 1585332 - g 70 -5.4 -4.42512 | overlap 1585330 1585334 AAAAGATAAAAAAGA TCTAGAAT ATT ATTCTAAA GCTTGCGAGTTAAAT TERM 1389 1585473 - 1585503 + G 76 -6.8 -4.4648 | opp_overlap 1585476 AGCTTGTGAGTTGAA CGATGCTAAAGGGT GTT ACGCTCTAGCAGCG TTTTATAATGAGGGT jhp1437 1584853 - 1585623 + | hypothetical protein jhp1438 1586633 - 1585662 - | DNA polymerase III subunit epsilon TERM 1390 1585860 - 1585848 - GT 73 -7.7 -3.64103 | overlap 1585850 CAGGCATATTTCAAA GAGCT TAT AGCTC GCTAAAGCGTCCGCA TERM 1391 1586325 - 1586312 - GT 79 -3.1 -5.46129 | CAACAAAGGAAAAAA CCTCA TCTT TAAGG GGGGTTTTAAGGTTT rpe 1587156 - 1586503 - | ribulose-phosphate 3-epimerase TERM 1392 1586869 - 1586883 + gH 91 -7.8 -5.1417 | TTTAATGAGTTGCAA CACCCT ATG GGGGTG TTTTTCATTTTCTGC fbp 1587227 - 1588099 + | fructose-1,6-bisphosphatase jhp1441 1588099 - 1588302 + | hypothetical protein jhp1442 1588369 - 1589350 + | type II restriction enzyme jhp1443 1589437 - 1590078 + | putative transcriptional regulator TERM 1393 1590249 - 1590224 - T 89 -9.1 -4.4874 | opp_overlap 1590229, overlap 1590229 GTTAAAAAGTTAAAA GAAAACAACCT TTAA AGGTCGTTTCC TAAAATCTCACTTCA TERM 1394 1590244 - 1590229 - T 80 -5.4 -5.14698 | opp_overlap 1590229, overlap 1590224 AAAGTTAAAAGAAAA CAACCT TTAA AGGTCG TTTCCTAAAATCTCA tsf 1591324 - 1590257 - | elongation factor Ts TERM 1395 1590283 - 1590297 + g 85 -4.2 -5.64274 | GCAAAGCCACTTCTT CAGCGA AAT TCTCTG TTTTTTTCTCAATGC TERM 1396 1591178 - 1591192 + g 73 -5.7 -4.56597 | ATCGGCTTTTTTGGC GGCTT TGCTC AAGCC TTTTTCGCGCAAGAA TERM 1397 1591233 - 1591249 + g 70 -3 -5.05782 | gap 1 TTTTGCAAATCCCCA GCCACTT CCAC AAG-GGC TTTTTTGCAATCCAT TERM 1398 1591279 - 1591291 + g 79 -4.9 -5.12617 | TCATGCCCGCATCGG TTAAG TCC CTTAA TTTTTTGACTAATTG rpsB 1592118 - 1591324 - | 30S ribosomal protein S2 TERM 1399 1591596 - 1591613 + g 90 -4.9 -5.63517 | gap 1 GGATATGGAGTTTCC TCGCT-TC AGC GACAGCGA TTTTTTCTTTAGCCA TERM 1400 1592027 - 1592045 + g 71 -6.1 -4.19238 | ATATTTTTCCTAACG CCAAAAA TGAAT TTTTTGG TTTTAGGGTTCCAAC TERM 1401 1593179 - 1593153 - g 70 -3 -5.0538 | overlap 1593166 CGCTATTTCAAAAAA CTCAAAAATGAA ATC CCCACTTTAGAG AGCGAATGCGAAGAG TERM 1402 1594246 - 1594236 - g 71 -4 -4.84359 | GGATTTTTAGAAAAA TTAG AGG CTAA AGAGATCGCTTCTTT pcrA 1592367 - 1595207 + | putative ATP-dependent helicase nhaA 1595231 - 1596547 + | Na(+)/H(+) antiporter 1 yajC 1596595 - 1596888 + | preprotein translocase subunit YajC secD 1596889 - 1598469 + | preprotein translocase subunit SecD secF 1598478 - 1599449 + | preprotein translocase subunit SecF jhp1451 1599459 - 1599797 + | hypothetical protein TERM 1403 1600443 - 1600417 - g 71 -6.6 -4.01564 | TAAAAGACTTAGAAA CTTTAGAAAACC ATT GGCCTTCTCAAG TCCTAACCATGCAAA TERM 1404 1601591 - 1601574 - g 70 -2.7 -5.14477 | opp_overlap 1601583 GAGATACTCAAAAAA TACGG GGCTGATG CCGTA AGGCTCTTTATCCTT leuS 1599807 - 1602227 + | leucyl-tRNA synthetase jhp1453 1602224 - 1602736 + | hypothetical protein TERM 1405 1603027 - 1603012 - g 78 -7.6 -4.41348 | CTGTTGTTAAAGAAA GCGTTT TAGA AAACGC CCACCAGCAATTGCA folC 1602726 - 1603895 + | folylpolyglutamate synthase TERM 1406 1604134 - 1604119 - g 79 -3.2 -5.52384 | TTTGTATCAAAAAAA TTACGC CCTA GCGAAA GAGATTAAAAACAAG jhp1455 1603895 - 1604821 + | hypothetical protein jhp1456 1604831 - 1605769 + | hypothetical protein jhp1457 1605688 - 1606098 + | hypothetical protein TERM 1407 1606562 - 1606580 + G 87 -5.2 -5.40072 | TTTATATACCTAATT CTAAGGCG TAT CGCTTGAG TTTTTTTGACGCAGA TERM 1408 1608162 - 1608181 + G 70 -2.8 -5.09895 | gap 1, opp_overlap 1608163, overlap 1608163 GATTATTTACAGAGA ATTGCGCCG TAA CGG-GCAAA TTTTTTACATCCATA TERM 1409 1609035 - 1609019 - g 78 -2.9 -5.36018 | ATGAAAAAAAAGAAA GCCTGAA AGC CCCAAGC AAAGACGATAACGAT mfd 1606102 - 1609107 + | transcription-repair coupling factor TERM 1410 1609580 - 1609568 - g 76 -3.3 -5.19251 | opp_overlap 1609577 CAAGATGAAGAAAAA GGCTT TTT ATGCC CATGCCATGGGGGTC petA 1609232 - 1609735 + | ubiquinol cytochrome c oxidoreductase, 2Fe-2S subunit petB 1609746 - 1610984 + | ubiquinol cytochrome c oxidoreductase, cytochrome b subunit petC 1610981 - 1611838 + | ubiquinol cytochrome c oxidoreductase, cytochrome c1 jhp1462 1612696 - 1612166 - | hypothetical protein jhp1463 1613799 - 1612696 - | hypothetical protein jhp1464 1615970 - 1614129 - | penicillin-binding protein TERM 1411 1614449 - 1614460 + g 72 -4.4 -4.71307 | TGCCATAACGCACCA CCTT AATT AAGG TTTCTTTCATTTTTC TERM 1412 1615850 - 1615837 - G 87 -5.3 -5.40072 | GCTTGCGCAAAAAAA GCTTT TTTA AAAGC GACCATCAAAAAAAT fliE 1616455 - 1616126 - | flagellar hook-basal body protein FliE TERM 1413 1616182 - 1616202 + g 72 -8.3 -3.61268 | overlap 1616185 CTTTGTTACGCACTT CAAGCATGA GTT TCATGCTCG TTTCAGCCTTCCCTA flgC 1617068 - 1616583 - | flagellar basal body rod protein FlgC flgB 1617503 - 1617081 - | flagellar basal body rod protein FlgB TERM 1414 1617815 - 1617826 + G 80 -2.2 -5.60993 | GGTGCTGTATCATTA TGGG GAAT TCCA TTTTTTTATACGCCA rodA_2 1617708 - 1618874 + | putative rod shape-determining protein jhp1469 1619904 - 1618897 - | hypothetical protein TERM 1415 1620086 - 1620100 + r 93 -10 -4.58395 | opp_overlap 1620086 TGTGCGATACATTAA GGGCTA AAT TAGCCC TTTTTCAAAAATCAG TERM 1416 1620100 - 1620086 - R 82 -10 -3.32022 | opp_overlap 1620086 TGTGCGATACATTAA GGGCTA AAT TAGCCC TTTTTCAAAAATCAG jhp1470 1621113 - 1620112 - | hypothetical protein TERM 1417 1620179 - 1620152 - G 73 -8.6 -3.64703 | opp_overlap 1620152, overlap 1620157 TCCGCGTCATTCAAA TCAAAGACCACT TTAT AGTAATCTTTGA TTATCGCATTAATAT TERM 1418 1621100 - 1621088 - G 71 -6.3 -4.14345 | GAATAGGAAATTAAA GCTTT TTT AAAGC GAGCGATTAGCATGA TERM 1419 1621466 - 1621481 + G 74 -4.8 -4.75518 | ATGGTGTGATCCTTT TCTTTT GGCC AAAAGA TTTTACTTTTGTATG tsaA 1621351 - 1621947 + | putative peroxidase TERM 1420 1621934 - 1621950 + F 79 -8.1 -3.9642 | opp_overlap 1621933 1621934 ATCTTAAAGAAAATT CCATTAA GCT TTAATGG TTTGATTCGCTGTTT TERM 1421 1621961 - 1622000 + F 86 -6 -5.44638 | gap 1, opp_overlap 1621972, overlap 1621962 1621963 AATGGTTTGATTCGC TG-TTTAATCAAGAGAAAC TTC GTTTTTCTTGGTTAAATCC TTTTCTTTTTATTCT TERM 1422 1621962 - 1621999 + F 83 -9.5 -3.83123 | gap 1, opp_overlap 1621972, overlap 1621961 1621963 ATGGTTTGATTCGCT G-TTTAATCAAGAGAAAC TTC GTTTTTCTTGGTTAAATC CTTTTCTTTTTATTC TERM 1423 1621963 - 1621997 + F 100 -13.2 -3.4503 | opp_overlap 1621972, overlap 1621962 1621961 TGGTTTGATTCGCTG TTTAATCAAGAGAAAC TTC GTTTTTCTTGGTTAAA TCCTTTTCTTTTTAT TERM 1424 1622496 - 1622485 - g 74 -4.4 -4.86133 | overlap 1622495 CACAGACATTAAAAA CCTT AAAA AAGG CTCAGTGATTGCTGT TERM 1425 1622514 - 1622495 - g 79 -4.9 -5.16472 | overlap 1622485 AAAAACCTTAAAAAA GGCTCAG TGATTG CTGTGCC AAATGATCCGGCCAA jhp1472 1622093 - 1622908 + | putative Outer membrane protein jhp1473 1625121 - 1623355 - | penicillin-binding protein TERM 1426 1623825 - 1623815 - G 74 -4.6 -5.00616 | overlap 1623800 GGCGTGGCTAAAAAA GAGC CTT GCCC AATAGCAGTAATGAG TERM 1427 1624971 - 1624983 + g 75 -2.7 -5.2112 | TATTGCCCCTTGTAG GGATT AGA AATTC TTTTTTAGTCATGTT jhp1474 1625545 - 1625102 - | hypothetical protein TERM 1428 1625152 - 1625136 - G 71 -7.2 -3.96291 | overlap 1625128 1625137 TACAAACCCCACAAA GCGCCC TCTAT GAGCGC AAAAAGAGCGAAAAG TERM 1429 1625447 - 1625435 - G 87 -3.3 -5.77734 | AAACAAAAATAAAAA CCCAA GCA TAGGG GGTAAAAAAGGCATC jhp1475 1626181 - 1625555 - | GTPase EngB jhp1476 1626735 - 1626178 - | hypothetical protein jhp1477 1627328 - 1626735 - | hypothetical protein jhp1478 1627797 - 1627303 - | hypothetical protein jhp1479 1628738 - 1627794 - | putative Outer membrane protein dniR 1629862 - 1628738 - | regulatory protein DniR jhp1481 1630710 - 1629946 - | hypothetical protein TERM 1430 1631125 - 1631142 + G 75 -5.5 -4.80959 | TGGATTTTTTCATCA GCGCTTC TAAA GAAACGC TTTTGTTGTGCGTTG ribC 1630785 - 1631405 + | riboflavin synthase subunit alpha TERM 1431 1631465 - 1631446 - g 70 -9.3 -3.23393 | overlap 1631444 CCCTAGCCTATAACA TGGGGCA AGATCA TGCCCCA AAAGTGATCGCAAGC flhB_2 1631406 - 1631678 + | putative flagellar biosynthesis protein jhp1484 1631697 - 1632680 + | ABC transporter ATP-binding protein TERM 1432 1632708 - 1632743 + G 70 -2.5 -5.06103 | opp_overlap 1632710, overlap 1632710 AATGCTCATTCAAGC CACGCTAGAAACGCT TTATAT GGTGTTTGTGGCGAG TTTTTTGGCGGTTGT jhp1485 1632682 - 1633329 + | ABC transporter, permease jhp1486 1633942 - 1633520 - | hypothetical protein jhp1487 1634548 - 1633952 - | hypothetical protein wecA 1635555 - 1634548 - | putative undecaprenyl-phosphate-alpha-N-acetylglucosaminyltransferase TERM 1433 1635080 - 1635069 - G 78 -7.2 -4.37013 | overlap 1635070 AATGAATGACTAAAA GCGC GATC GCGC AAATCCCAGATGCAA TERM 1434 1635415 - 1635431 + g 76 -9.3 -3.69395 | opp_overlap 1635409 1635408 AAGAAAGATCCCAAG CCCCCCG GCT CGTGGGG TTCTTGCATGATGGA pdxJ 1635691 - 1636479 + | pyridoxal phosphate biosynthetic protein PdxJ pdxA 1636481 - 1637404 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 1435 1638450 - 1638434 - g 76 -2.2 -5.42259 | GGAGGTTGAAAAAAA CGCCCA TAATT TGAACG ATGAGGTAAAACAAA ydiE 1637754 - 1638776 + | O-sialoglycoprotein endopeptidase TERM 1436 1639544 - 1639564 + F 85 -7 -5.06414 | opp_overlap 1639544 1639563, overlap 1639557 1639563 TTCTGCATGAGACTA GGTTTAAA TCTTT TTTAAACC TTTTTGTTAAAAAGC flgG 1639654 - 1640442 + | flagellar basal body rod protein FlgG jhp1493 1641395 - 1640766 - | hypothetical protein TERM 1437 1642072 - 1642083 + r 70 -4.4 -4.77757 | TGGCTATTTTTTTGA CAAC TTCC GTTG TTTTAATTTTTAGCG TERM 1438 1642170 - 1642191 + r 71 -8.8 -2.89511 | opp_overlap 1642170, overlap 1642169 AAATTAAAATAAAAA CTAGATGC ATCCTC GCATCTAG GTTTCCATTCTATAC TERM 1439 1642191 - 1642170 - R 100 -9.5 -5.56372 | opp_overlap 1642170 1642169 AAATTAAAATAAAAA CTAGATGCA TCCT CGCATCTAG GTTTCCATTCTATAC jhp1494 1642987 - 1642226 - | hypothetical protein TERM 1440 1643190 - 1643207 + r 80 -5.5 -5.28826 | overlap 1643191 CTCAAACGCTAAAGG GGGGGAT TTTT ATCCCCA TTTTTTCTAACCTTT TERM 1441 1643191 - 1643206 + r 80 -9 -3.75669 | overlap 1643190 TCAAACGCTAAAGGG GGGGAT TTTT ATCCCC ATTTTTTCTAACCTT jhp1495 1643586 - 1643353 - | hypothetical protein