TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.60302 %AT, 1393320 nt, 8497 terms. Intergenic: 0.661477 %AT, H2T: 151922 nt, 894 terms; T2T: 48982 nt, 839 terms; H2H: 72875 nt, 729 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|209406223|ref|NC_010698.2| Helicobacter pylori Shi470, complete genome (length 1608548) nusB 427 - 11 - | transcription antitermination protein NusB TERM 1 89 - 115 + g 70 -8.8 -3.41961 | opp_overlap 95, overlap 90 AGGGGTGTTAGGCTC AGCATAGAGTTT GCC AAGCTCTATGCA TTCATTGATGATGAT TERM 2 90 - 114 + g 83 -12.3 -2.64695 | opp_overlap 95, overlap 89 GGGGTGTTAGGCTCA GCATAGAGTTT GCC AAGCTCTATGC ATTCATTGATGATGA TERM 3 246 - 258 + g 77 -4.9 -5.00616 | GGTTCAATGAGGGCG TCAAT TTC ATTGA TTTTTTCCAACACGC ribH 899 - 429 - | riboflavin synthase subunit beta HPSH_00015 1739 - 909 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 4 986 - 996 + g 79 -6.8 -4.62069 | GCATATTCGCCCCAT CGCT TAG AGCG TTTTTAGGATCAACA HPSH_00020 2391 - 1726 - | beta-carbonic anhydrase TERM 5 2853 - 2835 - g 81 -5.9 -5.01732 | overlap 2822 AACGCTCTTAAAAAA CGCCCCT TAATC ATGGGCG TGAGCGCTTTAACCA TERM 6 3139 - 3171 + G 71 -6.4 -4.19276 | gap 1, overlap 3126 3130 TCGTGGTGGGCCGCC CCATTTATC-AGGCT AAAG AGCCTAGAGAAGTGG TTTTAGAGCTTTTAA HPSH_00025 2514 - 3197 + | orotidine 5'-phosphate decarboxylase panC 3198 - 4028 + | pantoate--beta-alanine ligase TERM 7 5055 - 5041 - T 93 -8.6 -4.65263 | opp_overlap 5041 5040 AGGCTTTAAAAGAAA TCCCTT AAA AAGGGA GTTTCACAAAGAGCC TERM 8 5413 - 5429 + T 70 -8.1 -3.29263 | TGCTGTTTTTAGTGG CTTTATC ATT GATAAAG TTATAGAGGACATCT TERM 9 7143 - 7117 - T 78 -7.4 -4.08767 | opp_overlap 7119 7125, overlap 7120 7121 7125 7136 GTGAGTCTTGTAAAA TAATGAGATCTT ATC AAGATCTCGCTA GTATAGCATGAATTG TERM 10 7140 - 7120 - T 75 -6.9 -4.17316 | opp_overlap 7119 7125, overlap 7117 7121 7125 7136 AGTCTTGTAAAATAA TGAGATCTT ATC AAGATCTCG CTAGTATAGCATGAA TERM 11 7139 - 7121 - T 80 -10.4 -3.09908 | opp_overlap 7119 7125, overlap 7120 7117 7125 7136 GTCTTGTAAAATAAT GAGATCTT ATC AAGATCTC GCTAGTATAGCATGA TERM 12 7182 - 7204 + T 78 -2 -5.62219 | overlap 7184 7194 TTTGCACTAATTGGG CGTTTTGTTG TTT CAAAAAAAAG TTTTTTTGGTGTCTT HPSH_00045 7312 - 7229 - | hypothetical protein TERM 13 7336 - 7310 - G 77 -9.5 -3.53091 | opp_overlap 7315, overlap 7293 7315 AGCGGTTTTGTCAAA CAAAAGCCCCC AAAAA GAGGGCTTTTA TCAAGAAAAGCAAGG TERM 14 7331 - 7315 - R 88 -7.2 -4.86731 | opp_overlap 7315, overlap 7293 7310 TTTTGTCAAACAAAA GCCCCC AAAAA GAGGGC TTTTATCAAGAAAAG TERM 15 7375 - 7346 - R 72 -4.9 -4.71426 | gap 1 CTTTTATCAAGAAAA GCAAGGG-GGCTTA CAT CATGCCGCCCATGC CTCCCATACCGCCCA groEL 8996 - 7356 - | chaperonin GroEL TERM 16 8285 - 8320 + g 85 -4.2 -5.66684 | gap 1, overlap 8287 CCTCTTTCATGGTTT TTTCTAGTAGTGGGAGA ATG TCTTTCA-TGCTAGAGA TTTTTTTATCCGTTA TERM 17 8715 - 8705 - G 73 -5.4 -4.56775 | AGCCCTCTTTAAAAA TGCT ATA AGCA AGCACGGTCGCTGTG TERM 18 8856 - 8872 + g 70 -3 -5.08824 | gap 1, overlap 8852 GCCGTCTTTGGTGAT GCT-TGG AGCG CCATAGC TTTTTTGGATCAACA groES 9377 - 9021 - | co-chaperonin GroES TERM 19 9208 - 9196 - G 75 -7.7 -4.09685 | opp_overlap 9195 9196 TTGTATTTGCCAAAA GCGAT CAC ATCGC CTTCTTTAACGCATT dnaG 9663 - 11342 + | DNA primase TERM 20 12123 - 12091 - g 82 -7.7 -4.59773 | opp_overlap 12091 CGTGATTGTCAAAAA CGGGCGTTATTTTGT CTT ACCCAATAACGCTCG TTTGGTGGTGGCAAG TERM 21 12091 - 12123 + G 79 -9.9 -3.78775 | opp_overlap 12091 CGTGATTGTCAAAAA CGGGCGTTATTTTGT CTT ACCCAATAACGCTCG TTTGGTGGTGGCAAG HPSH_00065 11339 - 12391 + | argininosuccinate synthase TERM 22 12453 - 12465 + G 79 -4.8 -5.03747 | GAAAAAAGCTCTAAT CAGC GTTAG GCTG TTTTTTAGGAGGTTT HPSH_00070 12388 - 12498 + | hypothetical protein TERM 23 12600 - 12588 - g 72 -10.5 -2.55242 | opp_overlap 12588 12586, overlap 12587 12584 AGCGAAGAAAAGGAC GCCCC TAA GGGGC TATTCCCTTTTTATA TERM 24 12588 - 12600 + G 77 -10.5 -3.30767 | opp_overlap 12587 12584 12588, overlap 12586 AGCGAAGAAAAGGAC GCCCC TAA GGGGC TATTCCCTTTTTATA TERM 25 13151 - 13162 + G 74 -4.4 -5.00616 | opp_overlap 13160 CCCTTATATGCCTTT TGCT CAAG AGCA TTTTTTGCAAAAAGG HPSH_00075 12483 - 13310 + | hypothetical protein TERM 26 13376 - 13389 + F 71 -3.1 -5.14894 | gap 1, overlap 13376 13377 AGCCACCCCTTTTGA C-CCCT TTT AGGGAG TTTTTATGGTTTTTT HPSH_00080 13456 - 13737 + | hypothetical protein TERM 27 13897 - 13922 + G 76 -4.7 -5.14965 | TATTGTATTTAGGGT TTTTAGCACTC TTTA GCGTGCTGGAA TTTTTTGATGAAGAT HPSH_00085 13737 - 14000 + | hypothetical protein TERM 28 15772 - 15788 + G 74 -3.7 -5.13473 | AACGCTTTGAATGAC GCGTT CAACTCC AACGC TTTTTTAAATGTGAT TERM 29 15843 - 15828 - g 76 -7.6 -4.21908 | opp_overlap 15827 15828 15839 15842 CACCATCACCCAAAA CCCTAA AGAC TTAGGG CTTTTAGCCTATTAT HPSH_00090 14002 - 16365 + | hypothetical protein HPSH_00095 16686 - 18026 + | hypothetical protein HPSH_00100 18121 - 19086 + | chemotaxis protein (cheV) HPSH_00105 19083 - 20300 + | carboxynorspermidine decarboxylase (nspC) HPSH_00110 20882 - 20310 - | lipid A 1-phosphatase HPSH_00115 22464 - 20893 - | lipid A phosphoethanolamine transferase TERM 30 22662 - 22677 + r 76 -7.6 -3.90291 | GAGCCTTTCGTGTTA GCATTC AATG GAATGC TTTAGTTAGGAAGCT TERM 31 22711 - 22690 - R 73 -8.7 -3.18264 | opp_overlap 22686 TGCTTTAGTTAGGAA GCTCCTTTC TTTA GAAAGGGGC ACTCTCACGAAAAGA TERM 32 22773 - 22786 + r 75 -8.1 -3.73968 | opp_overlap 22772 22771 AGAAGTGGATTAAGC CCCCT AAAA AGGGG TTTAATGCGAGCTTT HPSH_00120 24867 - 22801 - | outer membrane protein HopD HPSH_00125 25187 - 25312 + | hypothetical protein gltA 26659 - 25379 - | type II citrate synthase HPSH_00135 26857 - 28134 + | isocitrate dehydrogenase (icd) HPSH_00140 28206 - 28733 + | hypothetical protein HPSH_00145 29366 - 28710 - | dethiobiotin synthetase HPSH_00150 29690 - 29370 - | hypothetical protein HPSH_00155 29869 - 30282 + | hypothetical protein HPSH_00160 30290 - 30565 + | hypothetical protein TERM 33 31782 - 31763 - g 85 -4.2 -5.53991 | overlap 31766 GATCGAGGAAAAAAA TCAGCCCT AAAA AGGGCAAA AAAATCAGCGTTGAT TERM 34 32542 - 32527 - g 73 -5.4 -4.65153 | TTAGACAAATTAAAA GCCCTA GCGC TAGAGC AAGACATAGCCTTAA TERM 35 32618 - 32597 - g 74 -3.7 -5.02074 | TCATCGCGCAAAAAA GCTACCAAA CGAC TTTAGGAGC GAGGGAAATTAAAAA TERM 36 32648 - 32636 - g 100 -4.9 -5.72207 | GGGAAATTAAAAAAA TCATT CAC AATGA GATCAAAACCCCATT HPSH_00165 30565 - 32787 + | ATP-dependent C1p protease (clpA) HPSH_00170 32777 - 33127 + | aspartate alpha-decarboxylase HPSH_00175 33138 - 33440 + | hypothetical protein TERM 37 34228 - 34242 + G 75 -5.7 -4.79352 | overlap 34206 AGAGCGCTATGGCAT CGCTT TAGAC AAGCG TTTTATTATCACTAA HPSH_00180 33440 - 34435 + | hypothetical protein TERM 38 35054 - 35066 + G 85 -4.1 -5.66229 | AATGCTTCGCTCTTG GGTTT TAC AAGCC TTTTTTGTTGTTGGT HPSH_00185 34441 - 35496 + | NADH-ubiquinone oxidoreductase subunit HPSH_00190 35512 - 35625 + | comB7 putative lipoprotein HPSH_00195 35622 - 36365 + | comB8 competence protein TERM 39 36383 - 36394 + G 72 -3.6 -5.17507 | overlap 36367 CGTAAGGTTTTATAC GCTC TTGT GGGC TTTTTGTTGGCTTTT TERM 40 36398 - 36429 + G 71 -3.8 -5.00616 | overlap 36401 GCTCTTGTGGGCTTT TTGTTGGCTTTTAG CGCT TTAAGAGCCGATGA TTTTTTAGAAGAAGC TERM 41 36551 - 36534 - g 71 -4.9 -4.60255 | opp_overlap 36534 AGAACCGCTCAAAAA TGTCCAA CACT TTGAACA TTGATTACTTTCAAG HPSH_00200 36365 - 37330 + | comB9 competence protein HPSH_00205 37323 - 38459 + | comB10 competence protein HPSH_00210 38530 - 39942 + | mannose-6-phosphate isomerase HPSH_00215 39970 - 41115 + | GDP-D-mannose dehydratase (rfbD) HPSH_00220 41108 - 42040 + | nodulation protein (nolK) HPSH_00225 42224 - 42120 - | hypothetical protein TERM 42 42167 - 42191 + g 75 -2.8 -5.31275 | overlap 42165 AAAGGGGTTTGGTGC GCGCTTCG CTCTCAATT CCAAGCGC TTTTTTATCATCAAG HPSH_00230 43323 - 42325 - | hydrogenase expression/formation protein HPSH_00235 45578 - 43326 - | transcriptional regulator (hypF) TERM 43 43672 - 43684 + g 73 -7.7 -3.87994 | opp_overlap 43672, overlap 43683 TTAAAAGGGTAAAAA GCGAT CTC ATCGC TTTGTAAGGCTAGAT TERM 44 43684 - 43672 - G 84 -7.7 -4.7416 | opp_overlap 43672 43683 TTAAAAGGGTAAAAA GCGAT CTC ATCGC TTTGTAAGGCTAGAT TERM 45 44279 - 44263 - G 86 -4.5 -5.4505 | opp_overlap 44263 GTTTTTAAGAAAAAA TTCAAAG TTT CTTTAAA GTGTTTTTCATTTTC TERM 46 45540 - 45529 - G 85 -7.2 -4.99645 | overlap 45530 AGGGTATAAATAAAA GGGC GCAT GCCC ACGCCTTGAACCACG TERM 47 45604 - 45584 - R 74 -9.1 -3.11988 | opp_overlap 45583 45601, overlap 45583 45601 TTTTATTCAATAAAG TTGCATCGT TAC ACAATGCAA GCTTCCATGCTGTTT HPSH_00240 46567 - 45575 - | hypothetical protein HPSH_00245 47324 - 46626 - | adenine specific DNA methyltransferase (dpnA) HPSH_00250 48388 - 47321 - | cytosine specific DNA methyltransferase (DDEM) TERM 48 48095 - 48116 + g 71 -3.7 -4.86939 | gap 1, opp_overlap 48095 48094, overlap 48096 TAAGAATAAAAAATT CCTAGGGTCT TTT AG-CCCTAGA TTTTTCCCTTTATTA HPSH_00255 48585 - 48385 - | hypothetical protein TERM 49 48583 - 48561 - G 79 -10 -3.56099 | opp_overlap 48560 GACAAGCGGGGCAAA GTTTTAGCAA GAT TTGCCAAAAC ATCTAATTCTTTGTC HPSH_00260 49611 - 48613 - | hypothetical protein HPSH_00265 49852 - 49652 - | adenine/cytosine DNA methyltransferase HPSH_00270 51332 - 49833 - | proline permease (putP) TERM 50 50046 - 50059 + g 72 -9.5 -2.93073 | opp_overlap 50045 50046 GAGCATGCCAGCAAT CGCGC CAAC GCGCG TCATTCTTGACCAAA TERM 51 50059 - 50046 - G 70 -9.5 -2.50113 | opp_overlap 50046, overlap 50045 GAGCATGCCAGCAAT CGCGC CAAC GCGCG TCATTCTTGACCAAA HPSH_00275 54916 - 51359 - | Proline/pyrroline-5-carboxylate dehydrogenase TERM 52 51964 - 51986 + g 79 -4.8 -5.03747 | opp_overlap 51962 CTTTTTGAGTCAAGC CTTCTAAAGC TTC GCTTAAGGGG TTTTTTAGGGCGTTT TERM 53 52997 - 52972 - G 79 -8.3 -4.0371 | gap 1 TAGTGCCTACAGAAA TGCCCACAGGGA AAT TCCATG-GGGCA ATGACCACACCCACG TERM 54 55392 - 55382 - g 70 -3.2 -4.89054 | TCTACAAAAAAAGAA GTGC AAT ACAC GCCTAAGGGCTTTTT HPSH_00280 55244 - 55453 + | hypothetical protein HPSH_00285 55564 - 55647 + | hypothetical protein HPSH_00290 55766 - 55641 - | hypothetical protein TERM 55 56460 - 56448 - gH 71 -7.7 -3.56092 | TCATCATGCCCTAAA GGCTT TAG AAGCC GCGCTTAAAAATAGG HPSH_00295 55951 - 56661 + | hypothetical protein HPSH_00300 56631 - 57056 + | hypothetical protein HPSH_00305 57058 - 57408 + | hypothetical protein TERM 56 59190 - 59164 - T 70 -4.4 -4.76963 | opp_overlap 59172, overlap 59168 59171 59172 CTATAGAACATAAAA TCTATAATGGCG AAA CGCCTTTAAAAA CACCCAACACCCTTA TERM 57 59172 - 59182 + T 73 -8.2 -3.53012 | opp_overlap 59171 59168 59164 59172 CATAAAATCTATAAT GGCG AAA CGCC TTTAAAAACACCCAA HPSH_00320 60629 - 59832 - | urease accessory protein (ureH) HPSH_00325 61228 - 60629 - | urease accessory protein TERM 58 60986 - 61007 + g 70 -8.8 -3.3517 | opp_overlap 60997, overlap 61002 ATGCATTTCTTCTAC CGCTTCTA AATTCA TAGAAGCG TCTTCTCTAATAGCT TERM 59 61182 - 61194 + g 70 -9.1 -3.14132 | opp_overlap 61181 61182 AAAGCTTCAATCAAG GCGGT TTT ACCGC TTCCTACAGGACCAC HPSH_00330 62000 - 61257 - | urease accessory protein (ureF) ureE 62541 - 62029 - | urease accessory protein UreE TERM 60 62232 - 62242 + g 75 -8.2 -4.02719 | opp_overlap 62231 62232 CGCCATAGTATAAAG CCGC ATG GCGG TTTCCTATTTCGTAG HPSH_00340 63130 - 62543 - | urea transporter HPSH_00345 63308 - 63198 - | hypothetical protein TERM 61 63283 - 63248 - G 100 -4.9 -6.4275 | gap 1, overlap 63249 63250 TAAAAACAAAAAAAA GC-CCCCAATTTTTTG ATAAA CAAAAAATCAGAGAGC TAAAAACTAAGGATT TERM 62 63326 - 63290 - G 81 -6.8 -4.72846 | overlap 63294 63302 TCAGAGAGCTAAAAA CTAAGGAT-TTAAGGAGC ATC GCTCCTAAAGATCC-TAG AAAATGCTAAAGAGT TERM 63 63323 - 63294 - G 77 -8.7 -3.83644 | gap 1, overlap 63290 63302 AGAGCTAAAAACTAA GGAT-TTAAGGAGC ATC GCTCCTAAAGATCC TAGAAAATGCTAAAG TERM 64 63314 - 63302 - G 70 -9.1 -3.15252 | overlap 63294 63290 AAACTAAGGATTTAA GGAGC ATC GCTCC TAAAGATCCTAGAAA ureC 65032 - 63323 - | urease subunit alpha HPSH_00355 65752 - 65036 - | bifunctional urease subunit gamma/beta lspA 66588 - 66115 - | lipoprotein signal peptidase TERM 65 66306 - 66328 + g 71 -4.8 -4.57569 | opp_overlap 66304 66306 CCCCAGCGCCAAACA CCATGCCAAA CTC TATCGCATGG TTTTTAAAAAGCTCC TERM 66 66406 - 66384 - G 75 -5.6 -4.67038 | overlap 66379 GCCCTAAAATCAAAA GGATTTGCAA GTA TTTCAAACCC CCCTCTAAAAAACTG HPSH_00365 67919 - 66582 - | urease protein (ureC) TERM 67 66756 - 66771 + g 79 -3.2 -5.52909 | GCTATAACCTTTCAG GCTTTC TAAA GGAGGC TTTTTTTGGATATTC TERM 68 67864 - 67880 + g 83 -12.3 -2.91695 | opp_overlap 67863 67860 67862, overlap 67861 CGCATCACAAACATG GGGGTGA GTT TCACCCC TGCTTTACCCCTCAC rpsT 68009 - 68278 + | 30S ribosomal protein S20 TERM 69 68306 - 68332 + F 71 -5.2 -4.51654 | overlap 68303 TTTTAACTTCTTTAA GCTCAATGATGG ATT TTATTATTGGGC TTCTTTTTGCGTTTT TERM 70 68507 - 68494 - g 73 -2.4 -5.22312 | AGCGATATTAAAAAA CTCA CCGAAT TGAG CAAAGAGCAAAGCTC TERM 71 68675 - 68660 - g 87 -3.2 -5.75822 | TAGAAATCAAAAAAA GCGATC TAGA AACCGC CATTAAGCAACTCCT prfA 68395 - 69453 + | peptide chain release factor 1 HPSH_00380 69844 - 70098 + | hypothetical protein TERM 72 70264 - 70252 - g 73 -5.5 -4.56775 | overlap 70262 ATGTTGCGGTAAAAA GCGAT AAA ACCGC CCATAAAGACGATCA TERM 73 70518 - 70502 - g 82 -10.9 -3.61103 | opp_overlap 70501 CAACTTGATTTCAAA CGCTCAA GGC TTGAGCG ATGCGTTCAGCACTC HPSH_00385 70176 - 71417 + | outer membrane protein HorA TERM 74 71433 - 71458 + F 100 -14.1 -5.29208 | opp_overlap 71439 GCCTTTCTCTTCTTT CCAACAGAGGG TTTT CTCTCTGTTGG TTTCTTTTTTCTTTT TERM 75 71835 - 71811 - g 74 -6.3 -4.36914 | TTGGGGGTTATAAAA GCAGCACCACA GAG TGGGGAGCTAC GGCTTTAAACTATAT TERM 76 72023 - 72035 + G 75 -7.7 -4.06491 | GATTCTTTTTATAGT TACCG CAC CGGTA TTTATATCCCCTTAG TERM 77 72155 - 72145 - g 79 -6.8 -4.57218 | opp_overlap 72145 72144 ACAAGAGAATGAAAA GGCT CAA AGCC CTTATTACAGGAGCA TERM 78 73007 - 72991 - g 73 -8.7 -3.72592 | overlap 72979 72978 AACGCCCACCAACAA CATGGGC AAC ACCCATG CAAATGATAGCAAGG HPSH_00390 71672 - 73459 + | hypothetical protein TERM 79 73552 - 73533 - f 70 -4.2 -4.8269 | overlap 73526 73534 CACAAGCACGAAAAA CTCCGTCC TTTA GGACGCAA GATGAGCGCATAGCC TERM 80 73676 - 73688 + F 71 -7.7 -3.53012 | opp_overlap 73680 GGAATGCTTTAGTTA GGAAG CTC CTTCC TTTAGAAAGGGGCGC TERM 81 73856 - 73846 - g 74 -4.6 -4.85599 | opp_overlap 73830 GGCACTTTATAAAAA GCCC TTT AGGC GGTTTCACATTTTAG HPSH_00395 73754 - 73885 + | hypothetical protein HPSH_00400 75910 - 73889 - | methyl-accepting chemotaxis transducer (tlpC) TERM 82 74112 - 74122 + g 81 -6.8 -4.72386 | ATATTAGCTTCAATT TCGC TGA GCGA TTTTTGCGTCCTTTC TERM 83 76027 - 76012 - R 74 -3.2 -5.22137 | AAGCAGAAAATAAAA GAGAGC CAAA ACCCTC CAAAGCTCCCCCAAA rpsI 76447 - 76058 - | 30S ribosomal protein S9 rplM 76869 - 76444 - | 50S ribosomal protein L13 HPSH_00415 77079 - 76975 - | hypothetical protein HPSH_00420 77248 - 77060 - | hypothetical protein HPSH_00425 78601 - 77255 - | malate:quinone oxidoreductase TERM 84 77889 - 77867 - G 90 -7.6 -5.18371 | overlap 77869 CGGCACAAAATAAAA GCTGCCCGCC ACA GGCAAGCACC CTAAATCCAAGCCAT HPSH_00430 80034 - 78661 - | hypothetical protein HPSH_00435 82039 - 80054 - | RNA polymerase sigma factor RpoD TERM 85 80083 - 80097 + g 74 -9.2 -3.5944 | AGTTTCTTAAAATGC GCCCGT ATT GCGGGC TTCTCAATTTTTTAA TERM 86 81287 - 81304 + g 78 -2.7 -5.46129 | TTCTACACGCTTCCT GTCTTTT TCAG AAACGAC TTTTTTCCTTTCTTC TERM 87 82197 - 82178 - R 75 -5 -4.91084 | opp_overlap 82178 82172, overlap 82172 AATAAAATTTAAAAA CCCCATTC TTTA AAATAGGG TTTTAATGGTTTGCG HPSH_00440 82925 - 82230 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 88 82508 - 82523 + g 79 -5.4 -5.00616 | overlap 82501 CTTTGAGCGCGATGT GTTGCT CATT AGCGAC TTTTTTAGCCAAAGC HPSH_00445 83865 - 82936 - | malonyl coenzyme A-acyl carrier protein transacylase TERM 89 84410 - 84424 + H 74 -2.2 -5.4505 | TGAAATAAGCATCGC TTTAAA TCA TTTGAA TTTTTTATTGGGGAA HPSH_00465 85119 - 85952 + | type II restriction enzyme M protein (hsdM) HPSH_00470 86860 - 85970 - | alpha-1,2-fucosyltransferase TERM 90 86558 - 86538 - G 81 -2.5 -5.54264 | opp_overlap 86541, overlap 86541 86543 AAATAGCCAAAAAAA TAAGTCAAG CGG CTTGGCTTT AGTAATTTAGGCTCG TERM 91 86953 - 86967 + r 88 -5.8 -5.63517 | GGGGCAAGTAACGCT TTCAAA TCA TTTGAA TTTTTTATTTGAAAA HPSH_00475 87489 - 86959 - | hypothetical protein HPSH_00480 87562 - 88506 + | 2-hydroxyacid dehydrogenase TERM 92 88818 - 88795 - T 100 -9.7 -5.5604 | opp_overlap 88795 88794 CCAATTAAGAAAAAA CCTTTAGGT GGATTG ACCTAAAGG CTTTAAAGGGGATGA TERM 93 88795 - 88818 + T 75 -9.7 -2.72144 | opp_overlap 88795, overlap 88794 CCAATTAAGAAAAAA CCTTTAGGT GGATTG ACCTAAAGG CTTTAAAGGGGATGA HPSH_00485 89547 - 88834 - | hypothetical protein HPSH_00490 91112 - 89652 - | threonine synthase TERM 94 91459 - 91437 - g 72 -3.4 -5.09259 | opp_overlap 91451, overlap 91432 91439 GATTTTAAAAGAAAA TGCCCTGCAT TCT ATGCAAGATA GTTTGCATTTCAAGG TERM 95 93128 - 93118 - g 81 -6.8 -4.72386 | GAAAGGACGCAAAAA TCGC TCA GCGA GATTGAAGCCAATAT HPSH_00495 91315 - 93351 + | methyl-accepting chemotaxis protein (tlpA) TERM 96 94303 - 94287 - g 70 -5.9 -4.44277 | opp_overlap 94287, overlap 94280 94281 TACGAAAATTTAAAA GAGTTAA ACC TTAACCC TTTAAACTATGAAGA HPSH_00500 93351 - 94457 + | hypothetical protein TERM 97 95064 - 95051 - g 80 -2.4 -5.60993 | TTGTGGATAAAAAAA CCTA TCGTTT TAGG AGTTATTTAGGAATC HPSH_00505 94573 - 95334 + | hypothetical protein HPSH_00510 96099 - 95317 - | hypothetical protein TERM 98 95416 - 95403 - G 79 -5.3 -5.13521 | AAAGCATGGAAAAAA CATTC GCTT GAATG CCGTTTTCTTGACAC TERM 99 95666 - 95643 - G 74 -5.2 -4.82901 | overlap 95645 CCTTTTTGACAAAAA GCGTGGGG TGCGCTGG CACCACGC CATAAAGCAAGGTTT HPSH_00515 97827 - 96130 - | methyl-accepting chemotaxis protein (tlpB) TERM 100 97650 - 97663 + g 74 -3.8 -5.1244 | opp_overlap 97650 TTGTCATGTAAGCGA GCGT TTTTTC ACGC TTTTTGTATTGCTCG TERM 101 97698 - 97713 + g 72 -4.6 -4.67011 | overlap 97700 CTAAATGCTCCTTGA GTTGCG CTAA CGCATC TTTTTGCATAACCTT HPSH_00520 99781 - 98036 - | 2',3'-cyclic-nucleotide 2'-phosphodiesterase TERM 102 98685 - 98701 + g 77 -7.9 -4.24326 | AAATTGAATAAGGCT GCCGCTG AAA CATCGGC TTTTGCATAATATTT TERM 103 99263 - 99233 - G 77 -6.1 -4.58395 | TTCAGCGTCCAAAAA CTCTAAGCCCGCA AAATG TTCAGGCGTAGAG GCTTCCCAAGTGGGG HPSH_00525 100388 - 99921 - | S-ribosylhomocysteinase TERM 104 99987 - 99964 - G 84 -6.6 -5.00616 | overlap 99966 CGTTTGTCTAAAAAA GCGCGCGC TAAATTCT GCGCGCCC TCTAAAGTGTGGTTA HPSH_00530 101565 - 100423 - | cystathionine gamma-synthase/cystathionine beta-lyase HPSH_00535 102503 - 101586 - | cysteine synthetase TERM 105 101661 - 101675 + g 70 -7.8 -3.69323 | CTGGCTGCCTTCTGG GAGGCG TTG CGCTTC TTTCAATGCTGCTAC TERM 106 103226 - 103188 - R 77 -6 -4.77157 | opp_overlap 103192 103193, overlap 103189 103191 103192 103205 GCAAGCCATTAAAAA TTACCCCCTAACAGAAAG GAA CTCTCTGTTAGGGATTTC CCCCAAAAGTTAGCT TERM 107 103225 - 103189 - R 79 -9.5 -3.45571 | opp_overlap 103192 103193, overlap 103188 103191 103192 103205 CAAGCCATTAAAAAT TACCCCCTAACAGAAAG GAA CTCTCTGTTAGGGATTT CCCCCAAAAGTTAGC TERM 108 103223 - 103191 - R 89 -12.1 -3.28873 | opp_overlap 103192 103193, overlap 103189 103188 103192 103205 AGCCATTAAAAATTA CCCCCTAACAGAAAG GAA CTCTCTGTTAGGGAT TTCCCCCAAAAGTTA TERM 109 103192 - 103222 + r 90 -11.2 -3.53343 | opp_overlap 103191 103189 103188 103192 103205, overlap 103193 GCCATTAAAAATTAC CCCCTAACAGAAAG GAA CTCTCTGTTAGGGA TTTCCCCCAAAAGTT TERM 110 103222 - 103192 - R 100 -15.6 -2.56601 | opp_overlap 103192 103193, overlap 103191 103189 103188 103205 GCCATTAAAAATTAC CCCCTAACAGAAAG GAA CTCTCTGTTAGGGA TTTCCCCCAAAAGTT TERM 111 103193 - 103221 + r 95 -14.7 -2.71791 | opp_overlap 103192 103191 103189 103188 103205, overlap 103192 CCATTAAAAATTACC CCCTAACAGAAAG GAA CTCTCTGTTAGGG ATTTCCCCCAAAAGT dnaK 105184 - 103322 - | molecular chaperone DnaK TERM 112 105144 - 105133 - G 71 -7.2 -3.86015 | opp_overlap 105132 CATTGCCTTCATAAA CCGC CATT GCGG AGTTGGTTGTCCCTA HPSH_00555 105790 - 105215 - | co-chaperone and heat shock protein 24 HPSH_00560 106620 - 105790 - | heat-inducible transcription repressor TERM 113 106287 - 106299 + g 86 -7.7 -4.99134 | opp_overlap 106260 CAAAATTTTCACTCG CGCTT TTT AAGCG TTTTTCATTTACCCT TERM 114 106693 - 106665 - H 70 -6.9 -3.85159 | overlap 106688 GCAAAAAGTTAATAA TCTATCACTTGTT TTA AAAAAGTGATAAA AATTACCCGATTTTT HPSH_00565 106915 - 107478 + | hypothetical protein HPSH_00570 107500 - 107796 + | hypothetical protein HPSH_00575 109704 - 107821 - | hypothetical protein TERM 115 108714 - 108702 - G 70 -3.4 -4.98531 | overlap 108695 108703 108704 GGTGCAAACCAAAAA GGTT GGTGT AACC AAAGGGGCGGAAACT TERM 116 109747 - 109736 - R 88 -7.2 -4.94222 | opp_overlap 109735 109736 109743 109744 AATAACTGATAAAAA GGGC TAAC GCCC CTTTGGATTAAAAGG HPSH_00580 111311 - 109767 - | flagellin B TERM 117 112960 - 112975 + G 73 -6.8 -4.15565 | opp_overlap 112960 112958 AAAAAAAGCAAATCA GCGCTT TAGA GAGCGC TTTTAAGGTGATAGA TERM 118 113091 - 113079 - g 73 -5.5 -4.65263 | ATCGCTCAAAATAAA GCCGA CTA TCAGC AAGTCTTAAAGGACT HPSH_00585 111477 - 113687 + | DNA topoisomerase I TERM 119 113776 - 113791 + G 71 -6.2 -4.183 | opp_overlap 113772 113776 CCCTCTAAAAAGCAA TGCAAT TACA ATTGCA TTTATTGCGAGTTGG TERM 120 114064 - 114078 + G 70 -3.6 -4.87133 | CAAGCCTTAAAGGAA TTTGAC ATC GTTAAA TTTTCTTTAGACGCT HPSH_00590 113677 - 114606 + | hypothetical protein HPSH_00595 115994 - 114756 - | hypothetical protein TERM 121 116138 - 116148 + r 71 -5.4 -4.48987 | opp_overlap 116138, overlap 116133 TCCATTTCAATAAAA CTTG ATA CAAG TTTTCCTTATACCCA TERM 122 116148 - 116138 - R 74 -5.4 -4.65916 | opp_overlap 116138 116133 TCCATTTCAATAAAA CTTG ATA CAAG TTTTCCTTATACCCA HPSH_00600 117291 - 116278 - | hypothetical protein HPSH_00605 119829 - 117391 - | phosphoenolpyruvate synthase TERM 123 117975 - 117994 + g 74 -5 -4.78572 | gap 1 AATACCGACTAGCCC CCCTATAGC CAA GC-ATGGGG TTTTCTTCATTAGGC TERM 124 118123 - 118143 + g 73 -8.5 -3.66654 | GCCAATGCCTTCAGC GATTTTTTT CAC AAAAAAATC TTTAGGGTTAGCATA HPSH_00610 120035 - 120148 + | hypothetical protein TERM 125 121704 - 121714 + G 79 -6.8 -4.55295 | AGCGAACATTTTGGG GGGA ATT TCCC TTTCTTTGTCGCACC thrS 120189 - 122027 + | threonyl-tRNA synthetase infC 122024 - 122635 + | translation initiation factor IF-3 rpmI 122616 - 122810 + | 50S ribosomal protein L35 rplT 122905 - 123255 + | 50S ribosomal protein L20 TERM 126 123306 - 123335 + F 71 -8.9 -2.97768 | gap 1, opp_overlap 123306, overlap 123305 123313 AAAAAGGTGAGAGGA TTTAGG-ACTTTTT ACT AAAAAGTTCCTAAA ATTGATTTTTGTTTC TERM 127 123561 - 123547 - g 75 -2.8 -5.1963 | CCTAAGCAAGAAAAA GCTATT AAG ACTAGC CCTACCAAAAAAGGT HPSH_00635 123466 - 124326 + | outer membrane protein HorB HPSH_00640 124378 - 124500 + | hypothetical protein HPSH_00645 124678 - 125109 + | hypothetical protein TERM 128 126312 - 126284 - g 87 -5.3 -5.45652 | overlap 126285 AGGTCTAAGAAAAAA CGCCGCCTTTC AAAGAAA GAAAGGCAACA ACAAGCCTTGCAACA HPSH_00650 125513 - 126382 + | hypothetical protein HPSH_00655 126812 - 127012 + | hypothetical protein HPSH_00660 128615 - 127248 - | L-serine deaminase TERM 129 127610 - 127623 + g 90 -3.8 -5.93809 | ACCCCGCTTCTGCAC CGCT CAAGGA AGCG TTTTTTTTGTAAAGA HPSH_00665 129856 - 128615 - | hypothetical protein TERM 130 128856 - 128842 - G 81 -2.8 -5.64274 | opp_overlap 128848, overlap 128843 TCAGCCATAAAAAAA TCGTTA CGC TAACGC TTAGGGTTTTAGAAG HPSH_00670 129919 - 130011 + | hypothetical protein TERM 131 131080 - 131064 - g 83 -5.1 -5.27335 | overlap 131066 GTGTTGAAAGAAAAA CGCCATA TTT TATGGAG CATTGATCCCATGCA HPSH_00675 130038 - 131387 + | tyrosine-regulated 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase TERM 132 131385 - 131416 + F 74 -2.4 -5.4182 | overlap 131387 AAAAAACAGCGCGCT TAGTTAAAAAGAGA TTAA TCTTTCTTTAACTC TTTTTCTTTATAATT TERM 133 131463 - 131476 + F 73 -3.9 -5.13473 | opp_overlap 131450 TATTTAAAGGAGCTT GAAAT GAGA ATTTC TTTTTTAGCTGTAAT HPSH_00680 131466 - 131600 + | hypothetical protein TERM 134 131772 - 131752 - T 75 -4.9 -4.93877 | overlap 131753 TGTTATCAAACAAAA CTTAAAAAA ACA TTTTTTAAA AGTGAGAGAATGGCT HPSH_00685 132287 - 131829 - | bacterioferritin comigratory protein HPSH_00690 132932 - 132297 - | hypothetical protein HPSH_00695 134370 - 132925 - | conserved hypothetical iron-sulfur protein HPSH_00700 135127 - 134399 - | conserved hypothetical secreted protein TERM 135 134449 - 134460 + g 81 -5.8 -5.08824 | overlap 134441 AATGCATGGGTTTTG TGGG AGAG CCCA TTTTTTGCATAGCGG TERM 136 135392 - 135425 + G 84 -2.4 -5.7827 | gap 2, overlap 135404 135405 AGGCCATATTTGGCT GAGCGCTTTAGTGGCG CTAT CGCC--TATTGCGCTC TTTTTTATTTCTCTT TERM 137 135933 - 135945 + G 72 -3.3 -5.17576 | overlap 135934 TCTCAAATGGTGGGC AGGGT GTT ACCCA TTTTTTCCATTGGTA TERM 138 136379 - 136367 - g 71 -6.3 -4.21194 | TTCTATCAGTCAAAA GGTTT TTA AAACC GTTCCCATTGTTACT HPSH_00705 135348 - 136997 + | L-lactate permease TERM 139 137486 - 137503 + G 70 -9.9 -2.59564 | opp_overlap 137472, overlap 137485 AGCGGCGATTTTAGT GGGCTTA GGGT TAAGCCC CTTATACGCTGCCGG TERM 140 137721 - 137737 + G 75 -2.9 -5.30616 | AAAGAAACTTTTCCG GCCGT TTTTATC GCGGC TTTTTCTTTCGCTGG TERM 141 137984 - 137998 + G 70 -5.7 -4.41348 | opp_overlap 137984 TGTGTTATGGATACA GCCTT TTTTT AAGGC TTTATTTGAAAAAGA HPSH_00710 137046 - 138701 + | L-lactate permease (lctP) HPSH_00715 139594 - 138725 - | A/G-specific adenine glycosylase TERM 142 138969 - 138984 + g 78 -4 -5.24129 | opp_overlap 138969 TGGTGCATCCCAAAA TAGAGT TTTT GCTCTA TTTTTTCTAAAGCGA TERM 143 139274 - 139264 - G 70 -3.2 -5.00138 | GATCCAAACCAAAAA GCCT TAA AAGC ACTCGTTTGATATTG HPSH_00720 141160 - 139712 - | C(4)-dicarboxylates and tricarboxylates/succinate antiporter TERM 144 141074 - 141060 - G 70 -2.8 -5.10968 | ATGAAGATACAAAAA TAAAGC CAT GCGTTA GGGTTTAACCCATCT HPSH_00725 141330 - 142796 + | cytochrome c oxidase, heme b and copper-binding subunit, membrane-bound (fixN) HPSH_00730 142809 - 143507 + | cytochrome c oxidase monoheme subunit HPSH_00735 143518 - 143736 + | cbb3-type cytochrome c oxidase subunit Q (CcoQ) HPSH_00740 143738 - 144616 + | cytochrome c oxidase diheme subunit HPSH_00745 144627 - 144833 + | hypothetical protein HPSH_00750 144830 - 144937 + | hypothetical protein TERM 145 145246 - 145226 - g 81 -5.5 -5.03715 | ATGACGCTCAAAAAA TAGAATTAG TGG CTAACCCTA AAGATTTGTTAGACA HPSH_00755 144973 - 145518 + | hypothetical protein HPSH_00760 145530 - 146111 + | hypothetical protein TERM 146 146895 - 146911 + G 86 -8.1 -4.84311 | overlap 146903 CCTTTTATGGGGGGT GGATTTT TTA AAAATCC TTTTATTGTATGCGA HPSH_00765 146200 - 146967 + | hypothetical protein HPSH_00770 147830 - 146964 - | hypothetical protein TERM 147 147114 - 147143 + g 73 -10.1 -2.80244 | overlap 147113 147111 CGTTGAAGTTTCGTT CGCATACAAGCTT AAAT AAGTTTGTAAGCG CTCTTTATTGACACG recA 147929 - 148972 + | recombinase A eno 148984 - 150264 + | phosphopyruvate hydratase HPSH_00785 150257 - 150532 + | hypothetical protein HPSH_00790 150548 - 151144 + | hypothetical protein aroK 151149 - 151637 + | shikimate kinase HPSH_00800 151658 - 152614 + | hypothetical protein HPSH_00805 153723 - 152611 - | putative lipopolysaccharide biosynthesis protein TERM 148 154228 - 154218 - g 89 -5.4 -5.40072 | opp_overlap 154218 TGGCGTTCAAAAAAA CCTT CCA AAGG CTATCTATTATTACA HPSH_00810 153874 - 154791 + | hypothetical protein HPSH_00815 155371 - 155240 - | hypothetical protein HPSH_00820 156272 - 155550 - | hypothetical protein HPSH_00825 157244 - 156273 - | delta-aminolevulinic acid dehydratase TERM 149 156908 - 156926 + g 76 -4.6 -5.17353 | opp_overlap 156908 156899 ACAAATCCGCTATAA CGATTAAA TCC TTGAATCG TTTTTTAATCGCTCT HPSH_00830 158598 - 157267 - | putative histidine kinase sensor protein HPSH_00835 159301 - 158624 - | response regulator (ompR) TERM 150 159457 - 159497 + r 70 -2.2 -5.38348 | gap 1 AGTTATTAATGGAAT TAAGGCTTT-GTTTTCA TGGAATAT TGAAAATTAAAGTCTTA TTTTTTAATGTTTTT HPSH_00840 159999 - 159535 - | hypothetical protein TERM 151 159808 - 159826 + g 74 -3.8 -5.1287 | TGTGATTTTTTCTTG CGTTTCTA TTT TAGCAGCG TTTTTTGACTCTAAA TERM 152 159939 - 159950 + g 73 -2.2 -5.22943 | opp_overlap 159929, overlap 159929 CAAAACCATCATCAA TGGT TTTA GCCA TTTTTTCAATTTCAT HPSH_00845 160253 - 159990 - | hypothetical protein TERM 153 160142 - 160159 + g 100 -4.8 -5.79526 | TTATTTGTTTTAACG CCTCTG TATGGT CAGGGG TTTTTTTTAAAATAT HPSH_00850 161566 - 160286 - | collagenase HPSH_00855 162288 - 161569 - | hypothetical protein prfB 163454 - 162363 - | peptide chain release factor 2 TERM 154 163405 - 163393 - G 70 -7.7 -3.78775 | opp_overlap 163392 163393 GGCTTGATGATTAAA GCGAT ATT ATCGC ATTTGTTTTGCAAGC HPSH_00865 164690 - 163515 - | molybdopterin biosynthesis protein (moeA) fliR 165467 - 164700 - | flagellar biosynthesis protein FliR HPSH_00875 166188 - 165442 - | hypothetical protein TERM 155 166795 - 166778 - g 93 -5.5 -5.6473 | overlap 166780 ATAACACGAAAAAAA CGGCTGA TTCT TCAGCAG GCGTGTTAGCGACAG HPSH_00880 166669 - 167568 + | putative peptidyl-prolyl cis-trans isomerase HPSH_00885 167585 - 168508 + | fructose-bisphosphate aldolase HPSH_00890 168530 - 169093 + | elongation factor P TERM 156 169141 - 169164 + F 75 -8.2 -3.78141 | opp_overlap 169144, overlap 169144 169157 ACAGCTTTTTTGTCA TAAGGGGTTG TTAC TAGCCCCTTA TTTGGGCTTTGTTTA TERM 157 169325 - 169309 - f 73 -7.3 -4.00465 | TACAATCTAAAAAGA GCTTGAT TGA ACCAAGC GAATAATCTCTTAAA HPSH_00895 169315 - 169437 + | hypothetical protein HPSH_00900 170658 - 169636 - | sialic acid synthase HPSH_00905 171303 - 170662 - | ABC transporter, ATP-binding protein TERM 158 170939 - 170915 - G 79 -11.4 -2.52464 | opp_overlap 170936 CCGCCGCTCAATTCA CCCACGCCCT GTTTT AGGGTGTGGG CTATGCCTAATTGCT TERM 159 171079 - 171097 + g 74 -9 -3.55761 | TTTTAAGCGCCGTAA TTCCAAAA GTT TTTTGGAA TTTAAAGCATAAATA HPSH_00910 172577 - 171303 - | apolipoprotein N-acyltransferase TERM 160 171878 - 171894 + g 73 -8.7 -3.75884 | CAATCAAGGTTTTTT GCTTGCT TTG AGCGAGC TTGATTTCTTTAAGA TERM 161 172383 - 172411 + g 77 -6 -4.57073 | opp_overlap 172383 CGCCCCCACAAAAAA CCCCAAAGCAAA AGCGC TATTCTTTGGGG TTTTTAAAAACGCTA TERM 162 172411 - 172383 - G 89 -6.7 -5.24129 | opp_overlap 172383 CGCCCCCACAAAAAA CCCCAAAGCAAAA GCG CTATTCTTTGGGG TTTTTAAAAACGCTA HPSH_00915 172678 - 172830 + | hypothetical protein HPSH_00920 172827 - 173528 + | hypothetical protein TERM 163 174784 - 174766 - g 78 -7.5 -4.41348 | TTGCCGGGAAAGAAA TCGCTAA CGGCT TTAGCGA GTTGAACGATCCTTT lysS 173538 - 175043 + | lysyl-tRNA synthetase TERM 164 176081 - 176068 - g 76 -4.5 -5.07486 | CACCGTGAATAAAAA CACCA TTCC TGGCG AAACGCGTAGCCCTT glyA 175043 - 176293 + | serine hydroxymethyltransferase HPSH_00935 176304 - 176846 + | hypothetical protein HPSH_00940 176868 - 177677 + | hypothetical protein HPSH_00945 178063 - 177878 - | hypothetical protein TERM 165 178315 - 178331 + r 81 -9.5 -3.72632 | opp_overlap 178314 178315, overlap 178300 178314 178318 178325 TCTTGTTTTCAAAAT CAAGATC TTT GATCTTG TTGTTAGATCTCTGT TERM 166 178331 - 178315 - R 74 -9.5 -3.04398 | opp_overlap 178300 178314 178315 178318 178325, overlap 178314 TCTTGTTTTCAAAAT CAAGATC TTT GATCTTG TTGTTAGATCTCTGT HPSH_00965 179768 - 179667 - | hypothetical protein HPSH_00970 179931 - 180467 + | hypothetical protein HPSH_00975 181981 - 180473 - | conserved hypothetical secreted protein TERM 167 181735 - 181746 + g 76 -4.4 -5.12617 | TATAAATATAAGTTT GCAT GTCA ATGC TTTTTTGGCTCATTC frdB 182740 - 182003 - | fumarate reductase iron-sulfur subunit HPSH_00985 184877 - 182733 - | fumarate reductase flavoprotein subunit TERM 168 182981 - 182997 + g 71 -5.1 -4.62069 | CTTCTTTTTTGGGGT GGGGAAT GAA ATTGCCC TTTTTGCCATAGCCC TERM 169 183924 - 183935 + g 75 -5.8 -4.7173 | CCCATAGGGCGATTT GGCT CCAT AGCC TTTTTGGATATGCTC HPSH_00990 185654 - 184887 - | fumarate reductase cytochrome b-556 subunit TERM 170 185170 - 185154 - G 70 -5.9 -4.46854 | overlap 185149 ATACAAAAGCCAAAA GTTTTGC GTG ACAAAAC GATAGCTTGAGCCAT tpiA 185868 - 186572 + | triosephosphate isomerase HPSH_01000 186582 - 187409 + | enoyl-(acyl carrier protein) reductase lpxD 187419 - 188429 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 171 188570 - 188552 - g 74 -6 -4.38712 | opp_overlap 188565, overlap 188554 188565 GGCATCCTGACAAAA TGGCTGAT CAA ATCAGCGA TGCGGTTTTAGATTA TERM 172 188814 - 188795 - g 73 -8.6 -3.72576 | opp_overlap 188788, overlap 188779 GCGTTGGCGAGCAAA GCCCTGAT ATTA ATCAAGGC GTGGATAGAGAAGAT HPSH_01010 188494 - 189651 + | S-adenosylmethionine synthetase TERM 173 190096 - 190107 + G 70 -3 -5.03314 | GAAAACGCGCGCAAT GAAA TCGC TTTC TTTTTTGCCGCTAGA HPSH_01015 189718 - 190131 + | nucleoside diphosphate kinase TERM 174 190421 - 190439 + G 70 -3.2 -4.84642 | overlap 190422 190424 190433 TTGATAATTTAGATG TTATTGAA TCT TTCAATGG TTTTATTGATTTGAG HPSH_01020 190156 - 190512 + | hypothetical protein rpmF 190528 - 190674 + | 50S ribosomal protein L32 HPSH_01030 190742 - 191761 + | fatty acid/phospholipid synthesis protein HPSH_01035 191785 - 192780 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 175 192905 - 192915 + G 80 -4.6 -5.24291 | CAGATAGCCGTATCC CTCC TAT GGGG TTTTATTTTAGTTTT HPSH_01040 192802 - 193104 + | hypothetical protein TERM 176 193107 - 193097 - T 77 -3.2 -5.45652 | AGTCCCAACAAAAAA CTCC ATG AGAG GTTTTGGTCGCTTTG TERM 177 193383 - 193362 - T 73 -7.3 -3.91897 | opp_overlap 193361 TGGTCTAGCTAGAAA GCCCCTT GTTTGAGG AAGGGGC GGTTTCATTGAGAAA HPSH_01045 193771 - 193388 - | hypothetical protein TERM 178 195593 - 195603 + H 70 -4 -4.95957 | TTGAATTTTTCCTTG TTTG CTT CAAA TTTTTGCTTGATTTC TERM 179 195975 - 195989 + H 70 -2.2 -5.3104 | opp_overlap 195971, overlap 195971 TTTTGTCAAGATCTT TTAAAG AAT TTTTAA TTTTCTTTTTAATGC TERM 180 196192 - 196202 + H 86 -2.6 -5.79526 | TTTAAAAATTTCATC TAAA CTT TTTA TTTTTTTTGAAATAT HPSH_01065 197050 - 198156 + | ATP-binding protein TERM 181 198165 - 198179 + T 89 -8.6 -4.28548 | opp_overlap 198165 GCATTAGTTTTGAAA GGGTTT TTT AAACCC TTTTAATCAATCGCT TERM 182 198179 - 198165 - T 77 -8.6 -3.56092 | opp_overlap 198165 GCATTAGTTTTGAAA GGGTTT TTT AAACCC TTTTAATCAATCGCT HPSH_01070 199191 - 198172 - | lipopolysaccharide 1,2-glycosyltransferase HPSH_01075 199328 - 199215 - | lipopolysaccharide 1,2-glycosyltransferase TERM 183 199898 - 199886 - g 76 -6.9 -4.40237 | opp_overlap 199888 GACCAGAGAGCAAAA GGCGC AAA ACGCC AGGCCTTATGTGTTA HPSH_01080 199437 - 200840 + | hypothetical protein TERM 184 201177 - 201163 - g 83 -3.6 -5.65177 | ATAGCCAGAAAAAAA CCTTAA CGA TTAAAG ATAATGGTATAGGCA HPSH_01085 200943 - 202808 + | heat shock protein 90 TERM 185 202828 - 202818 - T 74 -6.8 -4.4009 | opp_overlap 202818, overlap 202820 TTGTAGGGGATAAAA CCCT TTA AGGG TTTGAATAAACGCTT HPSH_01090 203964 - 203212 - | cysteine-rich protein A HPSH_01095 205201 - 204050 - | succinyl-diaminopimelate desuccinylase HPSH_01100 207077 - 205212 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 186 206557 - 206574 + g 71 -6.3 -4.30576 | opp_overlap 206548, overlap 206547 TTAGAAGCGTTTTCC CCAAAGC GCCC GTTTTGG TTTTGGTGCTCGCCA TERM 187 206623 - 206633 + g 81 -5.4 -5.11033 | AAAAAAGTGCCTGTG GTGA TGA TCAC TTTTTTAGCCTTATA TERM 188 208558 - 208573 + G 77 -6 -4.60889 | opp_overlap 208557, overlap 208557 AATCACTTCTAACAC CGCCAC CGCT GCGGCG TTTTTACCGGTGATT HPSH_01105 207173 - 208831 + | sodium-dependent transporter TERM 189 209170 - 209182 + G 72 -3.3 -5.16472 | TTTACCCTTTTTATA CCCGG GAG TTGGG TTTTTTGCGCTTTTT HPSH_01110 208844 - 209644 + | CDP-diglyceride synthetase (cdsA) TERM 190 210178 - 210166 - g 73 -6.9 -4.18494 | overlap 210167 210176 CATTCCTATTCAAAA CGCGC AAA ACGCG CTCAAGCACCCTAAT TERM 191 210500 - 210516 + G 70 -8.7 -3.32066 | CCCATTAGCATGGAG CGCTACA CTT TGTGGCG TTATAAAGACTTGTT HPSH_01115 209645 - 210751 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase HPSH_01120 210802 - 211098 + | hypothetical protein TERM 192 211512 - 211522 + G 71 -4 -4.99035 | opp_overlap 211512 TATGACGCTAAAAAA CTTT ATG AAAG TTTTTATATCCCTAA TERM 193 211522 - 211512 - g 74 -4 -5.06451 | opp_overlap 211512 TATGACGCTAAAAAA CTTT ATG AAAG TTTTTATATCCCTAA HPSH_01125 211146 - 211940 + | hypothetical protein HPSH_01130 212540 - 211956 - | phospholipid-binding protein HPSH_01135 212652 - 213113 + | hypothetical protein HPSH_01140 213286 - 214449 + | cysteine desulfurase HPSH_01145 214471 - 215451 + | nifU-like protein HPSH_01150 215626 - 215859 + | hypothetical protein TERM 194 216153 - 216141 - g 72 -3.3 -5.15117 | CAAAAGCGCAAAAAA GCGTT TCT ATCGC TGAAATTGAACATGA TERM 195 216800 - 216814 + G 81 -2.8 -5.60993 | opp_overlap 216800 TTGGTGAGCGCTAAA GAAGCT TCA AGCTTG TTTTTTTCTCAAGAA HPSH_01155 215972 - 217318 + | DNA repair protein RadA HPSH_01160 217455 - 218492 + | bifunctional methionine sulfoxide reductase A/B protein TERM 196 218506 - 218471 - f 100 -7.6 -5.9873 | overlap 218473 CCAGGATAAAAAAAA CGCATTAAGGGGTAAT GACT AGCACCCCCTAATGGG GGTAAAATGGGGGGT TERM 197 218504 - 218473 - f 71 -8.8 -3.0894 | overlap 218471 AGGATAAAAAAAACG CATTAAGGGGTAAT GACT AGCACCCCCTAATG GGGGTAAAATGGGGG HPSH_01165 218739 - 218825 + | hypothetical protein HPSH_01170 219779 - 218946 - | hypothetical protein TERM 198 219297 - 219278 - G 87 -4.9 -5.36441 | overlap 219279 GCGGGATAGAAAAAA TGCCGGT AACAAA ACCGGCG AGCATCAAAACCCCA TERM 199 219296 - 219279 - G 77 -8.4 -3.81141 | overlap 219278 CGGGATAGAAAAAAT GCCGGT AACAAA ACCGGC GAGCATCAAAACCCC TERM 200 219456 - 219444 - G 73 -7.7 -3.89524 | overlap 219430 AGCGTATTTGATAAA GGTGT AGC ACACC ACCACCACAAACACC HPSH_01175 219963 - 219805 - | hypothetical protein HPSH_01180 222072 - 219985 - | putative Outer membrane protein HPSH_01185 222329 - 223486 + | putative sulfate permease HPSH_01190 225147 - 223726 - | outer membrane protein (omp6) TERM 201 224150 - 224140 - G 76 -3.2 -5.26875 | GTTGTAATCAAAAAA GGCA TAA TACC GGATCCCAAAAAATT TERM 202 224626 - 224601 - G 77 -6.1 -4.56775 | opp_overlap 224604, overlap 224604 ATGTGTTGCCAAAAA TATTGCATGCG TTCC CGCTTGCATTA ATGCCCCATGGTTTG TERM 203 225289 - 225309 + r 91 -5.5 -5.89947 | opp_overlap 225289 CTTTAATAAAATTGA GCAAAAATT AAC AAATTTTGC TTTTTTTTGGATTTA HPSH_01195 226097 - 225372 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 204 226650 - 226660 + G 70 -5.4 -4.42743 | opp_overlap 226650 TAACGCTGAAAATAA GGAT AAA ATCC TTTATATTGTTTCTG HPSH_01200 226210 - 227007 + | hypothetical protein HPSH_01205 227023 - 227676 + | hypothetical protein TERM 205 228011 - 228026 + G 70 -9 -3.20751 | overlap 228009 TTGATTTAGCCGGGG GGCTTG ATGG CAAGCC TATTAAATTATTGGA TERM 206 228271 - 228281 + G 84 -6.8 -5.00616 | opp_overlap 228271 228270 228268 AATATTGAAGAAGAG CGCA CCA TGCG TTTTTTGCAAGACGC HPSH_01210 227701 - 228873 + | hypothetical protein HPSH_01215 228885 - 229403 + | hypothetical protein TERM 207 229544 - 229561 + G 74 -4.1 -5.055 | overlap 229545 229560 CCTCCTATCTCTTTA TGGGTTT TAAA AATCCCA TTTTTTAAAAATTAA HPSH_01220 229499 - 229576 + | hypothetical protein TERM 208 229801 - 229823 + T 84 -8.4 -4.55491 | overlap 229803 ACTAGTAGCATTCAT CACAAACGCT AAA GGCGTTTGGG TTTTCTGCTTGGGTG TERM 209 229803 - 229821 + T 75 -9.6 -2.5882 | overlap 229801 TAGTAGCATTCATCA CAAACGCT AAA GGCGTTTG GGTTTTCTGCTTGGG HPSH_01225 230918 - 229851 - | cysteine-rich protein E TERM 210 229913 - 229932 + g 72 -3.6 -5.13648 | overlap 229914 CCAGCTTACAGCCCT TGTCATAA ATCA TTATGGCG TTTTCTTTATCTTTC HPSH_01230 231380 - 231012 - | hypothetical protein hemC 232300 - 231380 - | porphobilinogen deaminase HPSH_01240 234044 - 232311 - | prolyl-tRNA synthetase TERM 211 233265 - 233241 - G 70 -3.3 -5.00616 | opp_overlap 233243, overlap 233243 CTCTGTTTTAAAAAA CTCCGCCACGC TTT GCGCGCTGGTG GTATTAGGGGTAGGG hemA 235397 - 234048 - | glutamyl-tRNA reductase TERM 212 234267 - 234281 + g 80 -6.4 -4.68506 | opp_overlap 234267 TTCTTTAGGCACATA GCGTTT TTT AAGCGC TTTTTGCAATTCCTT TERM 213 234788 - 234803 + g 91 -6.1 -5.38249 | GAGCCATCTCGCCAA GCCCT ATCACA AGGGC TTTTTTATCCTTAAT TERM 214 235135 - 235147 + g 74 -4.9 -4.72272 | ACGCTCATTTTTTTA TTTTG AGC CAAAA TTTTTAATAACGCAC HPSH_01250 236320 - 235397 - | putative octaprenyl-diphosphate synthase TERM 215 236000 - 235986 - G 79 -3.6 -5.45726 | GAGAGTTCAAAAAAA GCTTTA GAA TAAAAC ACATCCCCAAGCATC HPSH_01255 236725 - 236330 - | hypothetical protein HPSH_01260 237002 - 236718 - | hypothetical protein HPSH_01265 237457 - 237023 - | neutrophil activating protein (napA) (bacterioferritin) HPSH_01270 238807 - 237662 - | histidine kinase sensor protein TERM 216 238069 - 238080 + g 75 -5.8 -4.71482 | GGGCTTCTTTGAGAT CGCT CTCT AGCG TTTTTAAACTTTGCT TERM 217 238367 - 238389 + g 70 -2.7 -5.17488 | TTGCTTGCCTTGAAT GCTGTTTTG CTGGA CCAAATAGC TTTTATTTTCATGTT HPSH_01275 239121 - 238804 - | hypothetical protein flgI 240137 - 239118 - | flagellar basal body P-ring protein TERM 218 240913 - 240923 + G 70 -3.2 -5.00616 | overlap 240903 CCTCCCTAGCGAAGC GCAG ATT TTGC TTTTTTCAGCCACGA TERM 219 241170 - 241139 - g 74 -3.8 -5.14965 | gap 1, opp_overlap 241147 241148 ACGCGCACCAAAAAA GAAGCCGATGAATTG CAC CAATTCCTTG-CTTC TAAAAATTACAAAAG TERM 220 241752 - 241700 - g 74 -6.4 -4.33739 | gap 1, overlap 241716 GAAAAAACGCCAAAA CCCTCTAACAAAAAAACGCACCAGC ATGA GCAAGCGCGTTCTTTTAA-AAAGGG TCAGCACAAAGACAG TERM 221 241737 - 241716 - g 100 -5.7 -5.7946 | overlap 241700 CCTCTAACAAAAAAA CGCACCAGC ATGA GCAAGCGCG TTCTTTTAAAAAGGG HPSH_01285 240335 - 241813 + | ATP-dependent RNA helicase TERM 222 241884 - 241872 - g 100 -6.3 -5.75538 | TTTAAAAAAGAAAAA TTCTC AAA GAGAA ACCCCCACGCCTAAT HPSH_01290 241834 - 242922 + | hypothetical protein HPSH_01295 242929 - 243468 + | hypothetical protein HPSH_01300 245082 - 243532 - | oligopeptide permease ATPase protein TERM 223 244726 - 244738 + g 71 -4.1 -4.95155 | TTTTTCTTTAAGGAG CGTTT TAG AAGCG TTTTTATGGTGTAAA HPSH_01305 246114 - 245092 - | oligopeptide permease integral membrane protein TERM 224 246325 - 246311 - H 76 -2.8 -5.47914 | AAAAAGCAGAAAAAA GCGTAA AAA TTAAGC GAGAGCGATTATAAC HPSH_01310 246400 - 246498 + | hypothetical protein HPSH_01315 246479 - 247900 + | outer membrane protein (omp7) TERM 225 248277 - 248244 - g 79 -9.1 -3.94746 | overlap 248261 GGATAGGCAATCAAA TTGTCAATACTAATA AAGT TATTAGTAACGACAA CGCAGAATTAACCCA TERM 226 248354 - 248344 - g 85 -6.8 -5.16841 | TGAGACGAATAAAAA CGCT TAT AGCG TTCAAGCTTTGCAAG TERM 227 248582 - 248570 - g 83 -9.1 -4.07568 | TCGGTGTTTTTAAAA GGGCT TTT AGCCC AAATGCAGCTTTTTA HPSH_01320 247952 - 249331 + | outer membrane protein HopG HPSH_01325 249430 - 250665 + | adenylosuccinate synthetase TERM 228 250740 - 250727 - g 85 -6.7 -5.0095 | opp_overlap 250726 250727 AAAAATAGAACAAAA GCTTG AAAG CAAGC GTTTAGAATGGCAGC TERM 229 250990 - 250975 - g 71 -4.8 -4.5115 | overlap 250969 250968 TAGAAAAAGCTAAAA TCATTT TAGA AAATGA AAAGCGAAAAGAAAA HPSH_01330 250662 - 251090 + | hypothetical protein HPSH_01335 251083 - 251742 + | conserved hypothetical secreted protein TERM 230 252021 - 252007 - g 70 -2.8 -5.03314 | opp_overlap 252013 GCTATGCGCAAAAAA GCCCTT TCC AAAAGC TATGGATACTATTTG TERM 231 252153 - 252140 - g 83 -3.1 -5.64274 | gap 1 CGATTTAGAAAAAAA CGCGCT AGA AGC-CG GGCTATTAAAGGGGG HPSH_01340 251739 - 252794 + | hypothetical protein TERM 232 253403 - 253391 - g 76 -3.3 -5.26316 | opp_overlap 253391 TCATGGCACAAAAAA CGCTT TTG ATGCG ATTGTGGTGGCTAGG xseA 252807 - 254069 + | exodeoxyribonuclease VII large subunit HPSH_01350 255260 - 254088 - | type II DNA modification enzyme (methyltransferase) TERM 233 255814 - 255828 + H 75 -7 -4.16016 | opp_overlap 255803 255814 GAAATTTCTATCAAT GGGCTC AAA GTGCCC TTTATTAAAAAATCC HPSH_01365 256055 - 256750 + | Endonuclease MjaVIP TERM 234 256811 - 256823 + G 70 -2.7 -5.06735 | opp_overlap 256811, overlap 256811 256805 TCAGCGTTTTAGAGA CTTTT GAA AAAGG TTTTTATGATTTGTG HPSH_01370 256747 - 257505 + | adenine specific DNA methyltransferase (hpaim) TERM 235 259319 - 259303 - g 90 -8.7 -5.06414 | overlap 259316 GTGGGGCAAGAAAAA GCGATCA AAG CGATCGC TAAAGCGATTAAAAG HPSH_01375 257578 - 260148 + | ATP-dependent protease binding subunit (clpB) TERM 236 260503 - 260514 + G 76 -4.4 -5.01042 | ATTATATCGCCGGAG GGAT TGTG ATCC TTTTTGGTTTGCATT HPSH_01380 260205 - 260924 + | cytochrome c biogenesis protein TERM 237 261436 - 261448 + G 76 -6.9 -4.41241 | opp_overlap 261423 261434 261436, overlap 261423 ATGCGTTTGAAAACA CGCGC TTG GTGCG TTTTATGGAAGTTTC HPSH_01385 260934 - 262070 + | dihydroorotase (pyrC) HPSH_01390 262055 - 263284 + | chlorohydrolase HPSH_01395 263345 - 263587 + | hypothetical protein TERM 238 263844 - 263814 - g 71 -6 -4.20354 | overlap 263815 AACCCAACGCCAAAA TCGGGGTTTGCGGT TGC ACCGCAAGCCACAT GGGAGCGGATATTTT TERM 239 263843 - 263815 - g 73 -9.5 -3.1149 | overlap 263814 ACCCAACGCCAAAAT CGGGGTTTGCGGT TGC ACCGCAAGCCACA TGGGAGCGGATATTT HPSH_01400 263630 - 264910 + | conserved hypothetical ATP-binding protein HPSH_01405 264950 - 265603 + | hypothetical protein TERM 240 265990 - 266002 + G 87 -3.4 -5.79595 | opp_overlap 265970 265990 TCAAGCGTTTTAAAA TCCA GGATG TGGA TTTTTTGTTTTCGCC TERM 241 266080 - 266096 + G 76 -2.3 -5.47846 | overlap 266082 CGTTGTTGTATTTGC TTTTGGA GCG TTCAAGA TTTTATTTTTTGATT HPSH_01410 265596 - 266576 + | hypothetical protein HPSH_01415 266557 - 267099 + | hypothetical protein TERM 242 267145 - 267168 + G 76 -2.4 -5.4477 | overlap 267146 AGCAATCAGGCGATG TGGGGTTTAT CATT AAAAACCTCG TTTTTTTAGGGGTTT TERM 243 267292 - 267277 - g 79 -3.2 -5.51165 | AAAATCGTAAAAAAA GCGTTT TAGA ATACGC GCAAAGGCATTTTGA HPSH_01420 267096 - 267635 + | hypothetical protein HPSH_01425 267651 - 268049 + | hypothetical protein HPSH_01430 268086 - 269378 + | ATP-dependent nuclease TERM 244 269602 - 269614 + G 71 -6.9 -4.06903 | ATTATACGAAATAGG CGCGC CAA GCGTG TTTGATTTAGAAGTT HPSH_01435 269366 - 269923 + | hypothetical protein HPSH_01440 269980 - 270234 + | ferredoxin HPSH_01445 270244 - 271698 + | guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase TERM 245 271788 - 271770 - g 76 -8.9 -3.73224 | TTAGCGCTGATTAAA GAGCGTT TTACT AACGCTC AAATAGAATGGTTCG HPSH_01450 271695 - 272705 + | lipopolysaccharide heptosyltransferase-1 HPSH_01455 272702 - 273688 + | lipid A biosynthesis lauroyl acyltransferase TERM 246 273751 - 273739 - T 84 -6.3 -5.08601 | TTATTTGAAGAAAAA CTCAT TCA ATGAG AGCGGGAGTGGTATT tgt 274859 - 273744 - | queuine tRNA-ribosyltransferase TERM 247 273862 - 273850 - G 76 -3.4 -5.27938 | AGCTCTAAATAAAAA TGCA AATTG TGCA AGCTGGCCAAACGAG TERM 248 275722 - 275710 - g 73 -7.7 -3.83324 | GCACAAACATTTAAA GAGCT ACA AGCTC TACATCCAGGTTTTA HPSH_01465 274916 - 276352 + | hypothetical protein TERM 249 276855 - 276841 - g 73 -5.7 -4.56597 | opp_overlap 276840, overlap 276843 TGGCTTTTTTAAAAA CCCTT GAAAA AAGGG AATTTCAAGCAGGGG aroB 276357 - 277388 + | 3-dehydroquinate synthase TERM 250 277474 - 277463 - g 70 -3 -5.00895 | TTGACCATACAAAAA CAAA TGGC TTTG GTGGATAAAAAACTC TERM 251 277756 - 277772 + G 71 -5.1 -4.56702 | TATCGCTAACCCTAT TGCGATC ATT GATGGCA TTTCTTTCATTAAAA HPSH_01475 277379 - 278944 + | hypothetical protein TERM 252 279248 - 279269 + G 89 -4.5 -5.60993 | AAGAAAAGATTAACG CGCTTTT ACAAGAAA AAAAGCG TTTTTTTATAGACGA TERM 253 279583 - 279562 - g 81 -5.9 -5.17353 | AGATTGATTAAAAAA TTAAGCCAG ATTA CTGGGTTAA AGCGCATCAGAATTG HPSH_01480 278941 - 280197 + | hypothetical protein TERM 254 280633 - 280618 - g 82 -6.2 -4.84017 | overlap 280631 AAGCGCGCACAAAAA CGAATT AGAA AATTCG TTCCAGCGATACGAT TERM 255 280930 - 280910 - g 100 -12.7 -5.00616 | GCTGGGGCTAAAAAA GTGCATGAA CTT TTCATGCAC GCTAAAAGGCATGCC TERM 256 281448 - 281423 - g 73 -5.5 -4.56187 | gap 1, overlap 281426 281427 281442 GAGAACCAAAAAGAA TTAGTCGCTTTG TAT CAAAGCG-CGAA AGCCTTGAGCGCGTA HPSH_01485 280184 - 281836 + | cell division protein (ftsH) TERM 257 282199 - 282210 + G 70 -3 -5.06414 | TACAAGTATAGTGAT TCTA CAAT TAGA TTTTTATTAGAAAAA HPSH_01490 281839 - 282357 + | hypothetical protein TERM 258 282750 - 282712 - g 82 -8.1 -4.64657 | gap 1, opp_overlap 282724, overlap 282702 TTAAACGCTCAAAAA GCGGGCGAAGTC-GTGCT ACAA AGCGCTGAATTTGCCCGC TCGCACGCTCAAAGC HPSH_01495 282370 - 282843 + | hypothetical protein TERM 259 283748 - 283732 - g 70 -7.9 -3.66288 | opp_overlap 283707 283739, overlap 283707 CACTTTTGAAGAGAA CGCCGCT TTT AGCGGGG CGAAATTGAATGGTG TERM 260 285027 - 285039 + G 74 -9.1 -3.51637 | opp_overlap 285026 285025 CAGGCACGACTAATG GCGCT TAT AGCGC TTATCATGTGTATAT TERM 261 286564 - 286550 - g 79 -11.4 -2.57931 | overlap 286549 GCGACTTTGTATAAC CGTGCC GCT GGCACG CAAAGCTCGTCTATG TERM 262 286664 - 286689 + G 79 -5.5 -4.83615 | overlap 286666 GGAGGCAACCCTAAT TTCAGTTTCAA CGCT TTGAACCTGGA TTTTTCTAACAGCTC TERM 263 287350 - 287338 - g 70 -7.7 -3.70919 | opp_overlap 287337 CTTAAACCCTAACAA CAGCA GCG TGCTG AATTTAAAAAACAGC TERM 264 290532 - 290518 - g 70 -2.8 -5.09895 | overlap 290519 GATTTATTTAAAAAA CCACTC TTT GAATGA AATCTTAGGCGTGGC HPSH_01500 282908 - 291607 + | toxin-like outer membrane protein TERM 265 291701 - 291731 + G 75 -2.6 -5.1925 | overlap 291702 291730 ACAAAACCCCTTTTT ACCTCTATGATTTT GAC AAAATCAAACAGGC TTTTTTGAATTATAA HPSH_01505 291655 - 292872 + | diaminopimelate decarboxylase HPSH_01510 292877 - 293167 + | hypothetical protein TERM 266 293890 - 293870 - g 80 -6.1 -4.71061 | overlap 293848 293847 ATTCACATTGAAAAA GCCCGCA TGGATAT TGCAGGC GCGTATCAAATCATC HPSH_01515 293180 - 294052 + | hypothetical protein TERM 267 294941 - 294929 - g 74 -4.7 -4.89393 | opp_overlap 294929 294929 GAAAGTTTAGAAAAA CGCCC TAG GGGGG TGTATTGCGGAGCGA TERM 268 295669 - 295655 - g 73 -7.2 -4.07885 | CATGCCCCTTTAAAA TTGCAA GAC TTGCAA AGAGCGGATAAAATC HPSH_01520 294053 - 295732 + | para-aminobenzoate synthetase (pabB) amiE 295918 - 296937 + | acylamide amidohydrolase flgL 299506 - 297020 - | flagellar hook-associated protein FlgL rplU 299726 - 300040 + | 50S ribosomal protein L21 rpmA 300055 - 300321 + | 50S ribosomal protein L27 TERM 269 301120 - 301107 - g 72 -3.1 -5.0133 | GAGTTGGCTAAAAAA CCTAT TGGG ACAGG GCCTTTCAAATTCTT HPSH_01545 300438 - 302087 + | periplasmic dipeptide-binding protein HPSH_01550 302098 - 303102 + | dipeptide permease protein TERM 270 303163 - 303147 - g 76 -3.6 -5.33985 | opp_overlap 303160 TTCAAAAAAAATAAA GCGGCA GTAGT TGGCGC ATGGATTGTGCTTTT TERM 271 303707 - 303733 + G 70 -5.9 -4.41047 | gap 1 CCCTAATTGCATTAT CCCTTTGATCGT GCAA ACGA-CAATGGG TTTTGCTTCCACGGT HPSH_01555 303102 - 303959 + | dipeptide permease protein TERM 272 304787 - 304775 - g 74 -4.1 -5.09173 | GAATACCGCAAAAAA CGATT AGA AACCG TGGATGAAAATATAG HPSH_01560 303971 - 304834 + | dipeptide ABC transporter, ATP-binding protein (dppD) HPSH_01565 304831 - 305637 + | dipeptide transport system atp-binding protein obgE 305657 - 306739 + | GTPase ObgE HPSH_01575 306781 - 307776 + | hypothetical protein TERM 273 307897 - 307881 - f 70 -3.7 -4.88736 | overlap 307883 CATTATTTACAAAAA GAGTTTA AAA TAAACGC AATTGTATCTCTTGA TERM 274 307998 - 307984 - f 72 -5.8 -4.3586 | TTATTCACACTAAAA CAATAA GCG TTATTG ATAAGACCACATTAA TERM 275 308215 - 308202 - g 81 -6.7 -4.6644 | AAGATAGTTTAAAAA CCCTT TTAG AAGGG GCGAGTGCGAGCATG HPSH_01580 308024 - 308578 + | hypothetical protein TERM 276 309637 - 309601 - g 76 -4.6 -5.055 | gap 2, overlap 309633 TCAAGGTTTAAAAAA GAGCG-CTC-AAAGCTAT AAC ATCGCTTTAGAAACGCTC AATAGAGGGAGCATG HPSH_01585 308588 - 309880 + | glutamate-1-semialdehyde aminotransferase HPSH_01590 309885 - 310142 + | hypothetical protein HPSH_01595 310158 - 310562 + | hypothetical protein HPSH_01600 310646 - 311530 + | hypothetical protein TERM 277 312363 - 312350 - T 75 -8.1 -3.78778 | opp_overlap 312349 TGAGCATATCAACAA GCACG AGGG CGTGC GTTGGGTAACATTCA HPSH_01615 313171 - 312479 - | type II restriction enzyme HPSH_01620 314291 - 313182 - | DNA methylase HPSH_01625 314387 - 314743 + | hypothetical protein HPSH_01630 314743 - 315705 + | conserved hypothetical ATP-binding protein HPSH_01635 316856 - 315711 - | nitrite extrusion protein (narK) TERM 278 316898 - 316884 - H 70 -2.2 -5.33866 | CAAAGTTATAAAAAA CAATAT CTT ATATTA TATTGAAACTTGTTA HPSH_01640 317180 - 317260 + | hypothetical protein TERM 279 317316 - 317329 + T 79 -9.5 -3.35679 | opp_overlap 317310 AAAAAGAGATCTTTT GGGGC GTTT GCCCC TTATGAGTGAGAAAG HPSH_01645 318101 - 317346 - | hypothetical protein TERM 280 317512 - 317524 + g 76 -4.7 -5.08824 | ATGGTTTTAATGCCC CCAGC TCC GCCGG TTTTTTCAATGAAAG TERM 281 318106 - 318134 + r 70 -8.3 -3.21276 | opp_overlap 318106 318104, overlap 318104 CGATTAAGCAAAATA TTCTCCTTAATTT CAA AAAATAAGGGGAA TGTTATAACAAAAAA argS 319787 - 318162 - | arginyl-tRNA synthetase TERM 282 318328 - 318343 + g 72 -3.2 -5.00884 | overlap 318330 TCTGAGGCGAGGGTT TTTGCG TATT CGCACA TTTTTTGCAAGCCGT TERM 283 318445 - 318461 + g 71 -7.3 -3.90744 | opp_overlap 318445 318458 TTCAAATCGGTTAAA GGGGTTT GTA AAACCTC TTCTTTAGAAAAGGG TERM 284 319474 - 319490 + g 90 -5.1 -5.54338 | TGAGAACGCTCGCTT TTAGGCT GAG AGCCGAA TTTTTCTTTTAATTC HPSH_01655 320029 - 319790 - | sec-independent protein translocase protein gmk 320719 - 320099 - | guanylate kinase HPSH_01665 322187 - 320712 - | poly E-rich protein TERM 285 320832 - 320847 + g 71 -4 -4.95896 | CAAATTCAAGCGCAA TTCTAG GGGG CTGGAA TTTTTATCGCTTTCT TERM 286 321816 - 321849 + g 79 -3.1 -5.41746 | TGGGTCTAAATTCTG GCTAGGCTCTAGC TCGCTCAT GTTAGAACCAAGC TTTTTTTGAAGGATT TERM 287 321976 - 321986 + g 73 -5.4 -4.48987 | CTGTTTTTATTTTGA GAGA TGA TCTC TTTTAATTCTAGCCA HPSH_01670 322325 - 322200 - | hypothetical protein HPSH_01675 322329 - 322871 + | membrane bound endonuclease (nuc) HPSH_01680 323615 - 322878 - | outer membrane protein HorC TERM 288 323533 - 323549 + g 73 -7.3 -4.011 | AAATTTTTTGTCCAA GAAGGTG CAG CACTTTC TTCTTTAGCTATTAA flgH 323745 - 324458 + | flagellar basal body L-ring protein TERM 289 324828 - 324814 - g 74 -5 -4.77165 | opp_overlap 324799 324814, overlap 324809 GCTTTTACAAGAAAA GCATTT AAA AAACGC TTTTGAGATTTTAAA HPSH_01690 324476 - 325159 + | CMP-N-acetylneuraminic acid synthetase HPSH_01695 325150 - 326022 + | CMP-N-acetylneuraminic acid synthetase (neuA) TERM 290 326292 - 326308 + GT 79 -5.1 -5.02074 | opp_overlap 326306 AAGCATGGGTATTTG GGGATTT ATA AAAACCC TTTTTTGAAAAATAG TERM 291 326325 - 326306 - gT 77 -5 -4.87665 | opp_overlap 326292 GGGGATTTATAAAAA CCCTTTTT TGAA AAATAGGG GAGAGACTATTTTAA lpxK 327432 - 326494 - | tetraacyldisaccharide 4'-kinase HPSH_01700 326019 - 326561 + | flagellar biosynthesis protein G HPSH_01710 328211 - 327429 - | NH(3)-dependent NAD+ synthetase (nadE) TERM 292 328056 - 328070 + g 73 -5.8 -4.56597 | TAAAAGGGCATGAGC GTTTTT TTT AAAAAC TTTTTGACACAGCAC TERM 293 328186 - 328171 - G 70 -3.2 -5.00616 | opp_overlap 328171 TCTTTTTCTAAAAAA TCGCAT AAAT AAGCGA TGAGTTTTTGGTAAT TERM 294 329304 - 329293 - g 70 -3 -5.10497 | AACGCATGCAAAAAA TCTT AAAA AAGA TTCAAAACGGCTCAT HPSH_01715 328458 - 329450 + | ketol-acid reductoisomerase HPSH_01720 329469 - 330275 + | cell division inhibitor (minD) minE 330272 - 330505 + | cell division topological specificity factor MinE TERM 295 331008 - 330992 - g 84 -7.9 -4.67011 | AAGCGGATTTAAAAA GCGGCTC TAT GAGCAGC GCGAGATTAGCCCAA HPSH_01730 330517 - 331317 + | hypothetical protein TERM 296 331635 - 331625 - g 72 -3.2 -5.06414 | overlap 331629 TTTGGGTAAGAAAAA CAAG CGG CTCG CTATTAAAGACGGCC HPSH_01735 331314 - 331718 + | Holliday junction resolvase-like protein HPSH_01740 331775 - 331849 + | hypothetical protein HPSH_01745 331849 - 332319 + | cysteine-rich protein H TERM 297 332407 - 332424 + F 71 -6.3 -4.25848 | CGTTAAACGCTCTCT TGTCTTC TTAA GAAGGCA TTTTACTAGAGAGTT HPSH_01750 332509 - 332847 + | hypothetical protein HPSH_01755 332831 - 333397 + | hypothetical protein HPSH_01760 333409 - 333657 + | hypothetical protein HPSH_01765 333663 - 334040 + | hypothetical protein TERM 298 334207 - 334183 - g 73 -8.6 -3.76641 | ATGGCAAGAGCCAAA CCCTAAAGGA GCTTG TCCTTTTGGG TATAAAGAGTTACAA HPSH_01770 334131 - 334250 + | hypothetical protein HPSH_01775 334247 - 334321 + | hypothetical protein HPSH_01780 334312 - 334773 + | hypothetical protein TERM 299 335217 - 335236 + G 80 -6.4 -4.82756 | GATGTCTAGAGAAGC GAGCTCTT CTAT AGGGGCTC TTTTCTTCGTTGTCT HPSH_01785 334789 - 335574 + | hypothetical protein TERM 300 335868 - 335848 - g 72 -4.7 -4.81306 | TCTAATAAAAAATAA TCTTGATAG CCA CCAACAAGA AATAAGCGATTTGCT HPSH_01790 335564 - 336646 + | hypothetical protein HPSH_01795 337583 - 336702 - | hypothetical protein HPSH_01800 339133 - 337583 - | single-stranded-DNA specific exonuclease TERM 301 338405 - 338419 + g 74 -6.4 -4.386 | opp_overlap 338378 338401, overlap 338378 AAAAGAAATATCGCT CGCTTT TAA AGAGCG TTTTCTAAAAACTTC TERM 302 338573 - 338583 + g 87 -3.2 -5.83211 | CAAACACAACAACTC GCTA GAA TGGC TTTTTTCTTTTCCTA TERM 303 338838 - 338848 + g 70 -2.6 -5.03314 | overlap 338837 AAAGGGGCGTGGTGT TTTT CTA AAAA TTTTTTAGAAATCCC HPSH_01805 340758 - 339142 - | CTP synthetase TERM 304 339470 - 339483 + g 70 -3.1 -4.86773 | overlap 339448 339478 CCTAAAGGCGAATTA TAGGT GCGC ACCTG TTTTTGGTGGTTTTG HPSH_01810 341014 - 341676 + | hypothetical protein TERM 305 342639 - 342629 - g 100 -3.2 -6.17268 | TTAGAAGAAAAAAAA GAAG GCG CTCC TAAAAAACAAGTCGG fliF 341720 - 343423 + | flagellar MS-ring protein fliG 343442 - 344473 + | flagellar motor switch protein G TERM 306 345080 - 345094 + G 70 -8.6 -3.3334 | opp_overlap 345080 345077 CCCTTATTTAAACGA GCGTTT GCA AAACGC TTCTAAAATCAAATT fliH 344466 - 345236 + | flagellar assembly protein H TERM 307 345913 - 345925 + G 72 -3.3 -5.03145 | ATCTTTCAAGCTCAT CACCC CAG GCGTG TTTTTTGAAGAATTA TERM 308 346165 - 346149 - g 77 -6.5 -4.5366 | overlap 346151 CTAAAAAATCCAAAA GCGCGAT TTT ATCGCCC ACTGAAGCGTATTCT HPSH_01830 345239 - 347089 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 309 348807 - 348796 - g 75 -3 -5.32396 | ACACGAAAAAGAAAA CTTT TAGA AAAG CAAAAAGAAGGCAAG HPSH_01835 347086 - 348894 + | GTP-binding protein LepA HPSH_01840 348903 - 349832 + | DNA-cytosine methyltransferase HPSH_01845 349825 - 350295 + | hypothetical protein TERM 310 350687 - 350670 - T 82 -5.6 -5.29208 | overlap 350680 AAAAGAAAAAATAAA CATGCA AACACA TGCATG CATGAAAATTTTTCA HPSH_01850 351579 - 350770 - | flagellar basal-body rod protein (flgG) HPSH_01855 352920 - 351634 - | alpha-ketoglutarate permease TERM 311 352723 - 352702 - G 73 -2.1 -5.18357 | overlap 352706 CAATTTACCAAAAAA CAAACTCCC CAAA GGGCGCATG AAAAACCCTAGCATG TERM 312 352719 - 352706 - G 74 -3.7 -5.0917 | overlap 352702 TTACCAAAAAACAAA CTCCC CAAA GGGCG CATGAAAAACCCTAG HPSH_01860 355722 - 353083 - | cell division protein TERM 313 355185 - 355203 + g 74 -3.8 -5.03314 | opp_overlap 355199 TTTGAATGTCTGATG GGGCGTTT TCA AAACCCTC TTTTTTGGGGCTAAA HPSH_01865 358055 - 355719 - | hypothetical protein TERM 314 355912 - 355899 - G 80 -2.3 -5.66684 | opp_overlap 355899, overlap 355876 TAAGTCATAAAAAAA GGCTT TTAT AGGCC CTTTGTAACCCAGAT TERM 315 356149 - 356167 + g 81 -6.8 -4.74103 | GTTTCAAAGCTTTTT TCAAGATC AAG GATTTTGA TTTTTGCATTGAAGC TERM 316 357416 - 357438 + g 73 -8.6 -3.71284 | opp_overlap 357425, overlap 357417 TCTCTAATTTGAGAT TCAAAAATTC CAA GAATTTTTGG TTGTATTGATCGCAA TERM 317 357417 - 357437 + g 71 -9.9 -2.82449 | opp_overlap 357425, overlap 357416 CTCTAATTTGAGATT CAAAAATTC CAA GAATTTTTG GTTGTATTGATCGCA TERM 318 358070 - 358108 + r 82 -7.5 -4.58685 | TGCGTGGAGTAACCT TTTAGCTTGAGCGGTGA TGTTT TCAACGCTGAAGCCAAA TTTTTCAAAGAGTTT HPSH_01870 359977 - 358052 - | transketolase TERM 319 358943 - 358957 + g 71 -4.2 -5.00616 | GTTACTCACTCTCGT GGCTAA AGA TTCGCC TTTTTTGAAAACGGG TERM 320 359089 - 359102 + g 74 -3.9 -5.06451 | TAACTTTCACTTCTT CAAAA TGCA TTTTG TTTTTTGGGCTAATG HPSH_01875 360866 - 360024 - | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 321 360788 - 360776 - GR 77 -6.2 -4.59853 | TTAATTCCTTAAAAA GGGC TTGAT GCCC TAAATGCAAGCCGTC HPSH_01880 361539 - 360832 - | hemolysin TERM 322 360897 - 360919 + gr 73 -4.2 -4.89063 | overlap 360885 TCACTAAGCTTTCTT GGATCTTTAA GAT TTGAAAATCC TTTGTTTTTAAATGG TERM 323 361406 - 361428 + gr 80 -9.2 -3.53091 | opp_overlap 361427, overlap 361384 AGCTCAATCTTATCG CCCTCTTTAA CAA TAAAAGAGGG TTTAGAAACCACCAT HPSH_01885 362048 - 361539 - | hypothetical protein TERM 324 362446 - 362467 + G 71 -6.5 -4.27316 | opp_overlap 362445 ACGCTATCATCACAC GGCATGCTT TTTC AAGCGCGCC TTTTAAATTAGCCGA pyrB 362121 - 363044 + | aspartate carbamoyltransferase catalytic subunit HPSH_01895 363134 - 363054 - | hypothetical protein TERM 325 363355 - 363369 + G 75 -2.9 -5.3236 | TGAAAAATAGCACGC CTTTA AAGAA TAAAG TTTTTTGTGGGTTAT TERM 326 364120 - 364135 + G 70 -2.5 -5.15117 | CTTATGAAAGAAAAG GGGTT AGTATC AGCCC TTTTTTCCAATTTTC HPSH_01900 363339 - 364778 + | hypothetical protein TERM 327 364911 - 364933 + G 75 -2.8 -5.33124 | opp_overlap 364912, overlap 364912 TAAATATCTTAAAGA GCATTATAAA AGT TTTATAGTGG TTTTATTTTCTTCTT TERM 328 365981 - 365966 - g 70 -9 -3.13487 | overlap 365963 365964 AACAAAATGAAATCA TCGCCT TAAA AGGCGA AAGCGGGAGCGGTAA TERM 329 366117 - 366129 + G 79 -5.5 -4.91852 | AAAGATTAGCGTTGT CACTC AAA GGGTG TTTATTTTTAATGGG HPSH_01905 364870 - 366525 + | multidrug resistance protein (msbA) TERM 330 367117 - 367106 - g 70 -5.8 -4.37886 | GGAGGGTTTAGAAAA GCGT TTGA ACGC TATAGAAAATGCAGA HPSH_01910 366519 - 367142 + | hypothetical protein HPSH_01915 367146 - 367715 + | hypothetical protein TERM 331 368919 - 368901 - g 78 -3.8 -5.24129 | TTTGCTTAGAAAAAA GCAACAGT TCA ATCGTTGC AGAGCCTTATTATGG HPSH_01920 367826 - 369016 + | hypothetical protein HPSH_01925 369009 - 369671 + | hypothetical protein HPSH_01930 369752 - 370741 + | high affinity nickel transport protein HPSH_01935 371260 - 370745 - | hypothetical protein HPSH_01940 371393 - 372709 + | hypothetical protein HPSH_01945 373057 - 373194 + | hypothetical protein HPSH_01950 373184 - 373249 + | hypothetical protein HPSH_01955 373334 - 373462 + | hypothetical protein HPSH_01960 374038 - 373835 - | copper ion binding protein (copP) HPSH_01965 376264 - 374039 - | copper-transporting ATPase TERM 332 374815 - 374827 + g 73 -6.9 -4.30441 | overlap 374821 TCATTTCTTTTAAGG GGGCG TTA CGCTC TTTTGCGTATTCTAC TERM 333 375212 - 375200 - G 75 -7.7 -4.02334 | overlap 375210 GAGCCACACCACAAA CGCTA AAA TAGCG ATAGCGATCACGCTT TERM 334 375615 - 375625 + g 76 -6.8 -4.32857 | overlap 375611 ATCAAGGCTTGCATA GCGT CTA ACGC TTTGTCTTTAGAAAC TERM 335 376271 - 376289 + r 77 -6.2 -4.66833 | TTCTTTCATGCGCTT TTATTTTT ATT AAAAATAA TTTTTACCATTAAAA HPSH_01970 376974 - 376261 - | phosphatidylserine synthase TERM 336 377170 - 377156 - R 70 -7.2 -3.87506 | opp_overlap 377149 AAAAAAAACTTTAAA CAAACA GAA TGTTTG TAATAAGGCTTTAAA HPSH_01975 379118 - 377220 - | cell division protein (ftsH) prmA 380116 - 379127 - | ribosomal protein L11 methyltransferase TERM 337 379801 - 379779 - G 78 -2.6 -5.51046 | opp_overlap 379784 379796, overlap 379784 GAAAGATAGAAAAAA TCAAACCCGC TTT GCAGGTTTTG TTGCAAGCTCAAGCA TERM 338 379796 - 379784 - G 79 -6.9 -4.49041 | opp_overlap 379784, overlap 379779 ATAGAAAAAATCAAA CCCGC TTT GCAGG TTTTGTTGCAAGCTC HPSH_01985 380491 - 380117 - | response regulator TERM 339 380638 - 380656 + H 76 -7.4 -4.06419 | overlap 380641 ATCATTGGCTAAATG GAGCGTTC AAT GAGCGTTC TTATTTGTAAAAAAA HPSH_01990 380783 - 381385 + | outer membrane protein HorD TERM 340 381472 - 381484 + T 81 -7.7 -4.33417 | CCACTCGGACATCTC CCCTT AAA AAGGG TTTATTATAACTAAG HPSH_01995 381924 - 381517 - | hypothetical protein TERM 341 381790 - 381805 + g 76 -3.3 -5.22943 | opp_overlap 381790, overlap 381800 381801 ATTTTCACAGCAATA TTTGG CTAATT CCAAA TTTTTTGGGTTTGCT TERM 342 381858 - 381868 + g 72 -4.6 -4.72986 | opp_overlap 381858 TGGTGCTAGAATGAA CGCC ATC GGTG TTTTTAATGAAAATA HPSH_02000 382157 - 381927 - | hypothetical protein gidB 382687 - 382151 - | glucose-inhibited division protein B queA 383721 - 382684 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase HPSH_02015 384483 - 383722 - | hypothetical protein TERM 343 383943 - 383927 - G 75 -9.5 -3.32405 | opp_overlap 383927, overlap 383917 383925 AAAATCACTACAATA GCGTATT TAA AATACGC TTTCAAGCTCGCATC TERM 344 383927 - 383943 + g 77 -9.5 -3.57462 | opp_overlap 383917 383927 383925 AAAATCACTACAATA GCGTATT TAA AATACGC TTTCAAGCTCGCATC HPSH_02020 384958 - 384476 - | sec-independent translocase ruvB 386036 - 385026 - | Holliday junction DNA helicase B TERM 345 385747 - 385762 + g 79 -3.2 -5.39721 | overlap 385756 AAATTCGTCAAAATG GCGG CCAAATCA CCGC TTTTTTCTATCATGG panB 386849 - 386037 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 346 386222 - 386242 + g 73 -5.4 -4.62203 | CGCAATCTTTACCGC TCCCTATG CCGAT CGTGGGGA TTTTGATTGTTTGCG HPSH_02035 386997 - 387719 + | hypothetical protein HPSH_02040 387709 - 388563 + | hypothetical protein TERM 347 388688 - 388678 - g 75 -2.6 -5.2422 | AATTAGACGAAAAAA TAAA CCA TTTA AAACAACAGCTCACC TERM 348 388722 - 388710 - g 80 -6.2 -4.66609 | CAGCTCACCGAAAAA GGGG TTTCG CCCC AAGAGATAAATAAGG HPSH_02045 388575 - 389516 + | hypothetical protein HPSH_02050 389526 - 390848 + | hypothetical protein TERM 349 391354 - 391341 - g 70 -2.5 -5.07652 | TTTTTCAAAATAAAA TTTTA TCTC TAAAA GAGGTTGAACGGCTT minC 390851 - 391438 + | septum formation inhibitor lpxC 391435 - 392322 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 350 392323 - 392335 + F 73 -4.1 -4.88293 | overlap 392324 AAGGCTTTCGCTTAA TCCTA AAT TAGGG TTTATTTTTGGAATT HPSH_02065 392343 - 392816 + | hypothetical protein HPSH_02070 392871 - 393752 + | homoserine kinase HPSH_02075 393739 - 393993 + | hypothetical protein TERM 351 394692 - 394682 - g 76 -6.8 -4.40221 | AAATGAAACTGAAAA CAGC GTA GCTG AAAGCAAAAAACCCA TERM 352 394718 - 394704 - g 82 -4.2 -5.37593 | overlap 394705 394706 GCTGAAAGCAAAAAA CCCACT CAA AGTGCG GCGGCTATTTTTGAA TERM 353 396111 - 396101 - g 70 -5.4 -4.39426 | GATAGGGGTAGAAAA CGAT TCT ATCG CGCGCTTGCAAGCTC infB 393990 - 396836 + | translation initiation factor IF-2 TERM 354 397077 - 397091 + G 76 -7.2 -4.18197 | GGTGGTTTAAATGCC CAAAAC TCA GTTTTG TTTTAGATAACAGCT rbfA 396836 - 397171 + | ribosome-binding factor A HPSH_02090 397164 - 397604 + | hypothetical protein TERM 355 397866 - 397887 + G 76 -2.3 -5.4588 | AACCTTAAAGAAAAT CTCTCAATA CGCT TATTTAGGG TTTTTTATCCTTTTG HPSH_02095 397774 - 398886 + | hypothetical protein TERM 356 399833 - 399810 - g 76 -4.6 -5.03747 | gap 1, opp_overlap 399817, overlap 399819 AAATCCGCCAAAAAA TGGATAAACCC TTG GGGATT-TCCA CGGTTGAAACCGTAA HPSH_02100 399227 - 399898 + | putative transcriptional regulator HPSH_02105 401276 - 400230 - | hypothetical protein TERM 357 401221 - 401208 - G 74 -3.9 -5.04385 | GATATTTTTAAAAAA TTGTT TTGA AACAA GCTGGCATGCATAGC flhA 403505 - 401304 - | flagellar biosynthesis protein FlhA rpsO 403643 - 403915 + | 30S ribosomal protein S15 TERM 358 404578 - 404588 + G 81 -6.8 -4.81863 | AGCGCTACAAGGAGC GCGA CAA TCGC TTTTATTATGACTTT HPSH_02120 403945 - 405234 + | hypothetical protein HPSH_02125 405363 - 405866 + | 3-dehydroquinate dehydratase TERM 359 406869 - 406890 + G 76 -4.3 -5.0538 | overlap 406870 GGTGTTTTCTGTAGA GCCTGGGAT TTAT ATCCCTGGG TTTTTTGGGGTGCGC TERM 360 406870 - 406889 + G 70 -7.8 -3.62746 | overlap 406869 GTGTTTTCTGTAGAG CCTGGGAT TTAT ATCCCTGG GTTTTTTGGGGTGCG HPSH_02130 405880 - 406953 + | hypothetical protein TERM 361 406983 - 407008 + G 72 -4.7 -4.83169 | overlap 406987 ACTAGCCGCTTTTTC CCTAGCCTTTT TAAA AAAAGGCTTGA TTTTTCTAACAGGGT TERM 362 406987 - 407004 + G 77 -8.5 -3.88001 | overlap 406983 GCCGCTTTTTCCCTA GCCTTTT TAAA AAAAGGC TTGATTTTTCTAACA HPSH_02135 406953 - 407441 + | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (folK) TERM 363 408058 - 408042 - g 74 -6.5 -4.42464 | opp_overlap 408041 AACTGGCCAAACAAA GCGGGAT GAA ATCCAGC CATTTAGATGAAATC flhF 407435 - 408814 + | flagellar biosynthesis regulator FlhF HPSH_02145 408811 - 409695 + | ATP-binding protein (ylxH) HPSH_02150 409700 - 410014 + | hypothetical protein TERM 364 410488 - 410472 - g 85 -8.7 -4.43669 | ATTGAAAAAATTAAA GAAGCCA AAA CGGCTTC AGATATTTATGCGTT fliA 410016 - 410768 + | flagellar biosynthesis sigma factor fliM 410761 - 411825 + | flagellar motor switch protein FliM TERM 365 411837 - 411847 + G 70 -2.6 -5.06414 | opp_overlap 411837 GTGAGAAATGCAAGA TTTT ATT AAAA TTTTTATTCAAGAGG HPSH_02165 411829 - 412695 + | flagellar motor switch protein FliY TERM 366 412964 - 412949 - g 73 -7.6 -4.0683 | opp_overlap 412952 412963, overlap 412963 AAAGAAAGCGAGAAA GGCTTT TTTG AAAGCC ACAAAAAATATGTGG HPSH_02170 412724 - 413260 + | hypothetical protein HPSH_02175 413257 - 413757 + | hypothetical protein HPSH_02180 414229 - 413777 - | ferric uptake regulation protein HPSH_02185 415564 - 414389 - | recombination factor protein RarA TERM 367 414436 - 414421 - G 76 -7.6 -4.15453 | opp_overlap 414419 CAAGCCATTCTAAAA GGGTTT TTTC AAACCC TATGCCTTGAGAAGA TERM 368 415045 - 415059 + g 74 -4.2 -5.04249 | TTAAAAGATAGGTTT TAGCGC CAG GCTCTA TTTGTTTTTTGAGCA TERM 369 415514 - 415533 + g 74 -5 -4.81249 | overlap 415515 TATTAGATGCTCTTG GCCTAAAA AATC TTCTAGGC TTTTTGGGTTTAAAA HPSH_02190 415932 - 415561 - | putative heat shock protein (hspR) HPSH_02195 416808 - 415942 - | co-chaperone-curved DNA binding protein A TERM 370 417122 - 417141 + G 72 -10 -2.72461 | opp_overlap 417109 417122, overlap 417121 AGGGGCGCAAAAAAA CCCTCACA GCTA TGTGGGGG CTTTAGCGCGCCTTG TERM 371 417141 - 417122 - g 93 -7.8 -5.40474 | opp_overlap 417122 417121, overlap 417109 AGGGGCGCAAAAAAA CCCTCACA GCTA TGTGGGGG CTTTAGCGCGCCTTG HPSH_02200 416976 - 418226 + | hypothetical protein TERM 372 418250 - 418238 - T 74 -3.5 -5.25735 | TTAAAAAATCAAAAA TAAAA ATG TTTTA AGAAATTCTTTTAAA HPSH_02205 419024 - 418248 - | hypothetical protein TERM 373 418308 - 418297 - G 70 -3 -5.08824 | TTTTTAGGGAAAAAA GTTT TTTT AAAC TCAGGCTCCCATAGT TERM 374 418588 - 418570 - G 84 -2.4 -5.71638 | TAATAAGCAAAAAAA TGAGCC TCTTTTC GACTCA CATTAAAAAAAGCGT TERM 375 419357 - 419379 + r 74 -6.2 -4.56775 | ATTTTCTTTTATTTG CGCGGTAAGT TAT ACTTCCGGCG TTTTTCCCAAAGGCT HPSH_02210 420246 - 419350 - | response regulator TERM 376 420312 - 420297 - R 73 -9 -3.28791 | AGTTTTTGTTTATAA CGCATG CTCA CATGCG CTTGGACTAACAGCC ispDF 421498 - 420278 - | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein TERM 377 420809 - 420782 - G 71 -4.8 -4.56597 | gap 1, opp_overlap 420806 TGCTGGGTTGAAAAA GAGCG-CGAAATG CTT CAAATCGTCGCTC GTGGTGAGCTTGTGC TERM 378 421391 - 421407 + g 73 -7.3 -3.96893 | opp_overlap 421387 421384, overlap 421406 CAATAAAACAACGCT CGTTTGT TTG ACAAGCG TTTCTAGCGTTTCTT TERM 379 421406 - 421416 + g 70 -3.2 -4.8743 | opp_overlap 421387 421384, overlap 421391 CGTTTGTTTGACAAG CGTT TCT AGCG TTTCTTTATTTTCAA HPSH_02220 422950 - 421520 - | protease DO TERM 380 421821 - 421831 + g 82 -4 -5.4756 | GCACCGTTTTGAGCA GAAA TTG TTTC TTTTTTGTTAGGGTT HPSH_02225 424437 - 422995 - | amino acid permease TERM 381 423969 - 423955 - G 74 -4.2 -5.07486 | overlap 423956 CAGGCTGAAGAAAAA CTCGCC CTC GGCAAA AATTTTAACCGAAAA HPSH_02230 425171 - 424632 - | phosphatidylglycerophosphate synthase HPSH_02235 425776 - 425168 - | hypothetical protein HPSH_02240 426574 - 425786 - | 7-alpha-hydroxysteroid dehydrogenase TERM 382 425880 - 425865 - G 78 -4 -5.26316 | gap 1, overlap 425868 TCATCGCATAAAAAA TAAGCCG CTC CGGC-TA GATCGTTAGGATTGC TERM 383 425878 - 425868 - G 84 -8.2 -4.72201 | overlap 425865 TCGCATAAAAAATAA GCCG CTC CGGC TAGATCGTTAGGATT TERM 384 426430 - 426446 + g 75 -3 -5.20333 | CATCTTCTATAATTT TGTTGG CTTCT TCAACA TTTTTATTGTAAGTG HPSH_02245 427473 - 426571 - | dihydrodipicolinate synthase HPSH_02250 428822 - 427488 - | putative zinc protease TERM 385 428268 - 428251 - G 70 -5.5 -4.38154 | ATATCGTCCATAAAA CCAATGG GCGT CCAATGG TAGGGGTGATAGACA HPSH_02255 429874 - 428819 - | dihydroorotate dehydrogenase 2 TERM 386 429908 - 429927 + r 73 -9.4 -2.80091 | opp_overlap 429908, overlap 429907 429903 TGATTTGAACGATAA CCCTTAAA AGGT TTTAAGGG CTTGCTTTTCAAAGT TERM 387 429927 - 429908 - R 79 -9.4 -3.51825 | opp_overlap 429908 429907 429903 TGATTTGAACGATAA CCCTTAAA AGGT TTTAAGGG CTTGCTTTTCAAAGT HPSH_02260 431938 - 429911 - | polyphosphate kinase TERM 388 432195 - 432213 + r 83 -6 -5.1848 | opp_overlap 432195 432194 TTAACTCTAAAAGAT CGCTTAAA ATT TTTTAGCG TTTTTTGGGTTGATT TERM 389 432404 - 432435 + r 84 -11.6 -3.02096 | opp_overlap 432404, overlap 432397 CCATTATACTAAAAT TTTGGCTCTGGCGC AAGA GCGCTGGGGTCAAA TCTATGGTTACTAGC HPSH_02265 433692 - 432577 - | hypothetical protein HPSH_02270 435316 - 433685 - | type I restriction enzyme M protein TERM 390 433897 - 433917 + g 70 -2.6 -5.07652 | opp_overlap 433896, overlap 433896 433899 CAAAAGAAACCAGAG CGCAAAAA TCCGC TTTTTGGG TTTTATTTTGAAAAG HPSH_02275 438410 - 435309 - | type I restriction enzyme R protein (hsdR) TERM 391 436003 - 436021 + g 87 -3.2 -5.83211 | overlap 436001 GTTGAAGAGATTTTA TTGATCTT TTC AATATCAA TTTTTTCTTTTAGTG TERM 392 436027 - 436042 + g 75 -2.6 -5.2189 | overlap 436028 436035 TCAATATCAATTTTT TCTTTT AGTG AAAGGA TTTTTTCATCATTAG TERM 393 436078 - 436090 + g 70 -9.1 -3.15078 | overlap 436076 CGGATTAAATTGTAG CGCTC TTT GAGCG TGTTGATGGCGTGTG HPSH_02280 440353 - 438458 - | hypothetical protein TERM 394 439921 - 439907 - G 70 -5.6 -4.42235 | overlap 439909 AATGGCCAAAAACAA GCCGTC TAA GACGCC ATAAATCATGGTAGG HPSH_02285 441146 - 440379 - | hypothetical protein HPSH_02290 441470 - 441156 - | hypothetical protein HPSH_02295 442959 - 441472 - | hypothetical protein TERM 395 441501 - 441523 + g 78 -2.8 -5.41143 | gap 1, opp_overlap 441501, overlap 441504 CCTTATGATAATGCA CAT-CAAGC CCTAAA GCTTGCATG TTTTTTTCCCCCATA TERM 396 442060 - 442047 - G 70 -3.1 -5.00616 | gap 1, opp_overlap 442047, overlap 442050 442056 CTTCTTCGCAAAAAA TGAGCG AAA CGC-CA TTGGCTTTGGCTAGA HPSH_02300 443459 - 442971 - | hypothetical protein HPSH_02305 445180 - 443444 - | oligoendopeptidase F (pepF) TERM 397 444012 - 444034 + g 71 -4.9 -4.61482 | TCTGCGGTGGTTAAG GGCGTAT CCATGTTCA ATACGCC TTGTTTTTTGGACAA TERM 398 444217 - 444231 + g 85 -8.6 -4.42788 | CCCAGCCTTCTTTGA TCGCTT TAG AAGCGA TTTTGTGGAATTCAG TERM 399 444573 - 444586 + g 74 -5.3 -4.77925 | opp_overlap 444550 CGAGATTTTTCTAAC GCTTT ACTG AAAGC TTTTTGAGATTTTTT HPSH_02310 446527 - 445277 - | glutathione-regulated potassium-efflux system protein (kefB) TERM 400 446208 - 446194 - G 85 -5.7 -5.23016 | AAACAAGGGAAAAAA TGGGT GAAAG ACCCA AAACAAAATACCCCA TERM 401 446244 - 446232 - G 79 -3.3 -5.46657 | TACCCCAATAAAAAA GCGAT TAA AGCGC ATAAAACTACTTGTA HPSH_02315 446871 - 446680 - | hypothetical protein HPSH_02320 447415 - 446855 - | outer membrane protein (omp11) HPSH_02325 447611 - 447459 - | hypothetical protein TERM 402 447988 - 447968 - g 73 -7 -4.18018 | opp_overlap 447967, overlap 447976 447977 TTTGTGGAGCGAAAA TCTAAAGA TGGAT TCTTTAGA AATTCTTAAAAATCC TERM 403 448184 - 448163 - g 72 -4.4 -4.72272 | opp_overlap 448163 TGTCGCTACTAAAAA CGCTCAAA TAGGCT TTGGAGCG TTATCCTTGATTGAT HPSH_02330 447639 - 448379 + | molybdenum ABC transporter ModA TERM 404 448471 - 448482 + G 89 -5.8 -5.46629 | CCACCCTTATTTTAC TCCC TATA GGGA TTTTTTTAGGCTATT TERM 405 448568 - 448583 + G 74 -4.6 -4.88288 | GCCTTTAGTTTTACC CCCAAG CGTG CTAGGG TTTTATCTTCTTTTA HPSH_02335 448401 - 449075 + | molybdenum ABC transporter ModB TERM 406 449301 - 449287 - g 79 -3.6 -5.51402 | AGACACTCAAAAAAA GATTTT TTT AAAACC ACAGCAACGAAAAAT HPSH_02340 449072 - 449869 + | molybdenum ABC transporter ModD gltX 451342 - 449951 - | glutamyl-tRNA synthetase HPSH_02350 451461 - 452564 + | outer membrane protein (omp22) TERM 407 453277 - 453289 + G 76 -3.3 -5.24531 | opp_overlap 453279, overlap 453284 CTCTCAAAGCCTAGA TAGCG CGT CGCTC TTTTTTATAGCGAGT HPSH_02355 452573 - 455023 + | type II adenine specific methyltransferase TERM 408 455677 - 455690 + G 74 -5.3 -4.68506 | GAGCGTTGATGAGCC TTTGC AAAT GCAAA TTTTTACGCTTGATT HPSH_02360 455069 - 456868 + | hypothetical protein HPSH_02365 456884 - 457813 + | type II adenine specific DNA methyltransferase HPSH_02370 457816 - 458439 + | type II restriction endonuclease TERM 409 459542 - 459553 + G 76 -3.6 -5.25735 | TATTGAGTGTAGCGC TCGC TCAT GCGG TTTTTGATTTTTTAA HPSH_02375 458530 - 459576 + | type II DNA modification enzyme (methyltransferase) HPSH_02380 459579 - 459842 + | hypothetical protein TERM 410 459977 - 459959 - g 82 -6 -4.96501 | GCGCACAAAAAGAAA CCATCAAA TTT TTTGGTGG GGATAATTTTGAGAG HPSH_02385 459889 - 460326 + | hypothetical protein HPSH_02390 460509 - 460342 - | hypothetical protein HPSH_02395 461503 - 460559 - | catalase-like protein HPSH_02400 461787 - 463373 + | outer membrane protein HofC TERM 411 464257 - 464271 + G 81 -7.1 -4.59773 | TTGTAGGCACTTTCG TGGGG TTTTT CCCCA TTTTTCCCACTCCAG HPSH_02405 463443 - 464840 + | putative Outer membrane protein TERM 412 464846 - 464860 + T 73 -4.3 -4.87893 | GATTTACTAGCATTT TATCC TTAAT GGATA TTTTTGATTAGCCTT HPSH_02410 465498 - 465292 - | hypothetical protein TERM 413 465556 - 465545 - H 73 -4.4 -4.8543 | GAAGCGTTAGAAAAA CTCT TACA AGAG AAAAACGGACAAGTC TERM 414 466039 - 466021 - g 71 -6 -4.24404 | AGCCAAAGCTGAAAA GCTTGCTA AAT TAGAAAGC GAGAAACGGATAAAA HPSH_02415 465596 - 466195 + | hypothetical protein TERM 415 466339 - 466329 - T 71 -5.4 -4.63928 | opp_overlap 466329 ACACGATTGCAAAAA TCTC ATG GAGA TTATAATCCAAACCA HPSH_02420 467277 - 466552 - | hypothetical protein TERM 416 467039 - 467050 + g 84 -2.2 -5.79588 | GTGAAGATTTTCATT TCTG TTCC CGGA TTTTTTTCATTTTGG ruvC 467410 - 467883 + | Holliday junction resolvase HPSH_02430 470259 - 467884 - | iron-regulated outer membrane protein (frpB) TERM 417 470372 - 470399 + H 86 -8 -4.71463 | opp_overlap 470370 470372 TTATTATTAAAACCA GATTAAAAATAA AATT TTGTTTTTAATC TTTCTTATTTTCATT TERM 418 472075 - 472059 - g 77 -9.5 -3.55419 | overlap 472057 472070 AAAAATGATGAAAGA CATGCAT GAC ATGCATG GAAAAGACATGCACC HPSH_02435 470584 - 472110 + | catalase TERM 419 472118 - 472101 - f 72 -4.9 -4.82667 | opp_overlap 472101 GCACCACATGAAAAA GAAAAAG TAAC CCTTTTC TTTGAGCGTTCTTAT TERM 420 472932 - 472914 - g 77 -6 -4.57073 | opp_overlap 472914 472912, overlap 472916 CAGCGTGGTGAAAAA CGCTTCTA AGG TAGAAGTG TATTTGAAAGATTCA HPSH_02440 472261 - 473136 + | hypothetical protein HPSH_02445 473217 - 473432 + | hypothetical protein HPSH_02450 473819 - 473490 - | alkylphosphonate uptake protein HPSH_02455 474171 - 474905 + | CDP-diacylglycerol pyrophosphatase TERM 421 474946 - 474974 + F 78 -2.4 -5.68039 | gap 1, overlap 474949 ACTTTTAAAAAGCGT TATGGGGGTAGTG TTAC CAAAACCCCC-TA TTTTTTTGTGAATTT TERM 422 474949 - 474972 + F 76 -6.6 -4.46105 | overlap 474946 TTTAAAAAGCGTTAT GGGGGTAGTG TTAC CAAAACCCCC TATTTTTTTGTGAAT flgE 475109 - 477265 + | flagellar hook protein FlgE hypA 477323 - 477676 + | hydrogenase nickel incorporation protein HPSH_02470 477683 - 478144 + | hypothetical protein lpxB 478144 - 479226 + | lipid-A-disaccharide synthase TERM 423 479446 - 479432 - g 84 -10 -3.88331 | overlap 479429 GCTAAAGAAAAGCAA CGCTTC ATT GAAGCG AGAATTGTGGATTTA greA 479267 - 479761 + | transcription elongation factor GreA dut 479751 - 480188 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 424 480634 - 480612 - g 70 -2.6 -5.00884 | ACTTGCTTGAAAAAA GCCCCATTCT TAA AGAAATGAGC GCTTTACAAGAAGTG HPSH_02490 480185 - 480841 + | hypothetical protein HPSH_02495 480846 - 482540 + | hypothetical protein TERM 425 482968 - 482951 - g 85 -4.1 -5.61596 | ATGCGTATAAAAAAA GCGCTAA AATT TTAGAGC AACCTTTCAAAGCCT HPSH_02500 482545 - 483216 + | pantothenate kinase TERM 426 483722 - 483737 + G 76 -6.8 -4.47707 | overlap 483723 483728 CCTTTCTTTTGGGCT TGGCAC CAGC GTGCCG TTGTTTTTAATGGGG TERM 427 483728 - 483740 + G 75 -5.5 -4.73388 | overlap 483723 483722 TTTTGGGCTTGGCAC CAGCG TGC CGTTG TTTTTAATGGGGGTT HPSH_02505 483207 - 483944 + | hypothetical protein HPSH_02510 483931 - 484455 + | hypothetical protein HPSH_02515 484464 - 485456 + | ADP-L-glycero-D-mannoheptose-6-epimerase (rfaD) TERM 428 485610 - 485624 + G 85 -2.9 -5.71712 | CGAACAACCTCATCT CTTTA AAGGC TAAAG TTTTTTTATGTGGGG TERM 429 485863 - 485831 - g 100 -6.5 -5.8187 | overlap 485823 485832 GATTTAAGAAAAAAA CTTTTAGATTTTTTC ACA GAAAAAATCCAAGAA ATAGATGGCGTTATC TERM 430 485862 - 485832 - g 75 -7.8 -4.07495 | overlap 485823 485831 ATTTAAGAAAAAAAC TTTTAGATTTTTTC ACA GAAAAAATCCAAGA AATAGATGGCGTTAT HPSH_02520 485453 - 486844 + | ADP-heptose synthase HPSH_02525 486837 - 487415 + | phosphoheptose isomerase TERM 431 487442 - 487412 - T 100 -9.2 -5.06414 | opp_overlap 487417 TTTCGCTAATAAAAA TTAAATTCAAAGGC TAT GCACTTGAATTTAA CAAGAAAATGATTCC HPSH_02530 488569 - 487592 - | guanosine 5'-monophosphate oxidoreductase TERM 432 489887 - 489904 + G 83 -9.1 -3.97406 | opp_overlap 489886 TCATAGGACCAAACG GCGTGGG TAAA TCCACGC TTTGTAAGATTTTAG HPSH_02535 488818 - 490419 + | ABC transporter, ATP-binding protein TERM 433 491232 - 491222 - g 82 -4 -5.47218 | opp_overlap 491231 GCTTAGCGAAAAAAA TGAA GAA TTCA GCGGTTTTTTAAAGA HPSH_02540 490416 - 491333 + | hypothetical protein TERM 434 491368 - 491356 - T 88 -7.7 -5.00616 | opp_overlap 491356 491355 CTTTCTTTTAAAAAA CGCTT TAC AAGCG ATTTAATAAGGGCGT HPSH_02545 492048 - 491371 - | hypothetical protein HPSH_02550 493168 - 492215 - | type II restriction endonuclease TERM 435 492410 - 492434 + g 74 -6.5 -4.41633 | TCTAGTAGGCAATTT GCTTAAAGGGA TAA TTCTTTTAGGC TTATTTTTCACGCTA HPSH_02555 494148 - 493165 - | site-specific DNA methyltransferase HPSH_02560 494332 - 495921 + | type I restriction enzyme M protein (hsdM) TERM 436 496053 - 496043 - g 79 -6.8 -4.58283 | opp_overlap 496043 GAATTTTGGGAAAAA GGGA CTA TCCC TTGGTTTAGAATGGA TERM 437 496204 - 496239 + G 77 -4.8 -5.00616 | opp_overlap 496232 496235, overlap 496182 496205 496209 496223 496228 496232 AGGAGAGCATGCCCT TTTAATCGTTGATTCG TTAG CGAATCAACAATTCAC TTTTTTAAGCAAAAA TERM 438 496205 - 496238 + G 72 -8.3 -3.60048 | opp_overlap 496232 496235, overlap 496182 496204 496209 496223 496228 496232 GGAGAGCATGCCCTT TTAATCGTTGATTCG TTAG CGAATCAACAATTCA CTTTTTTAAGCAAAA TERM 439 496209 - 496234 + G 74 -9.1 -3.52177 | opp_overlap 496232, overlap 496182 496205 496204 496223 496228 496232 AGCATGCCCTTTTAA TCGTTGATTCG TTAG CGAATCAACAA TTCACTTTTTTAAGC TERM 440 496228 - 496266 + G 70 -8.5 -3.33419 | gap 1, opp_overlap 496232 496235, overlap 496209 496205 496204 496223 496232 TGATTCGTTAGCGAA TCAACAATTCACTTTTTT AAGC AAAAAAGCGAATTG-TGA TATTGCTTTAGACAT TERM 441 496232 - 496263 + G 73 -10.4 -2.83396 | opp_overlap 496232 496235, overlap 496209 496205 496204 496228 496223 TCGTTAGCGAATCAA CAATTCACTTTTTT AAGC AAAAAAGCGAATTG TGATATTGCTTTAGA TERM 442 496263 - 496232 - g 87 -12.6 -3.37344 | opp_overlap 496209 496205 496204 496232 496228 496223, overlap 496235 TCGTTAGCGAATCAA CAATTCACTTTTTT AAGC AAAAAAGCGAATTG TGATATTGCTTTAGA TERM 443 496260 - 496235 - g 77 -8.5 -3.82604 | opp_overlap 496205 496204 496232 496228 496223, overlap 496232 TTAGCGAATCAACAA TTCACTTTTTT AAGC AAAAAAGCGAA TTGTGATATTGCTTT TERM 444 496519 - 496504 - g 70 -2.6 -5.08011 | AAAAGCGCGAAAAAA GCAATA CCAG TATTAC CAAAACATGCTTTTA TERM 445 496634 - 496620 - g 72 -8.6 -3.61371 | opp_overlap 496613 AAACCTTACTCCAAA CCTTAG CGC CTAAGG GGGTGGAGTTTAGGA TERM 446 496851 - 496863 + G 70 -2.7 -5.04175 | ATCAAAAGTTTTGGG CAAAT GAT GTTTG TTTTTCTGTCATTCC TERM 447 496982 - 496954 - g 72 -8.3 -3.60805 | opp_overlap 496960 496961, overlap 496959 ATATTCTATTTCAAA TAGAAGCGCTATA CCT TATAGCATTTCTA GTAACAACATTATGC TERM 448 497137 - 497122 - g 75 -2.6 -5.3236 | AGAAGCGAGAAAAAA GCAATA CGAA TATTAC AGAGAAAAACTACTG HPSH_02565 495914 - 497182 + | anti-codon nuclease masking agent (prrB) TERM 449 497275 - 497262 - g 93 -2.3 -6.25242 | overlap 497263 ATAATGAAAAAAAAA GCGCT TATG AGAGC GAAGCAGAGCTAGAA TERM 450 500091 - 500103 + G 72 -3.4 -5.01732 | AAGAAAAAGTCGCTG CAAG CCTTT CTTG TTTTTTCCACCGCTT HPSH_02570 497186 - 500185 + | type I restriction enzyme R protein TERM 451 500838 - 500859 + G 80 -6.5 -4.81249 | gap 1, overlap 500835 TGGGGCTGGGTGTTT GCACGCAGCA GCG TGC-GCGAGC TTTTTAAGTTTGAGA HPSH_02575 500272 - 501051 + | hydroxyethylthiazole kinase TERM 452 501197 - 501185 - g 70 -5.5 -4.40804 | CATCACCGCACAAAA CACAC AGG GCGTG CATGGGGTTTATCCG TERM 453 501531 - 501517 - g 71 -4.2 -4.84311 | overlap 501518 TGCGAGATAATAAAA GCGCTT CAA AAGCGA TGGGTATTTTAAGGG TERM 454 501689 - 501677 - g 70 -3.3 -4.88228 | opp_overlap 501686 ATTCAACACGAAAAA CACGC ATG GCACG GGTTGTGTTCTGTCT HPSH_02580 501048 - 501857 + | thiamine biosynthesis protein (thi) HPSH_02585 501850 - 502509 + | thiamine phosphate pyrophosphorylase HPSH_02590 503301 - 502564 - | hypothetical protein TERM 455 502665 - 502645 - G 80 -6.2 -4.67982 | opp_overlap 502645, overlap 502608 TTCCACGCAAGAAAA GCCCAAAA GGGTG TTTTGAGC CTCTTTTAAAATTTC TERM 456 502771 - 502794 + g 80 -4.6 -5.22039 | opp_overlap 502771 GCCCAAATTAGGATA CAGAGCGT AAAAATCA ACGCTTTG TTTTTTGGCTTTCAC TERM 457 503314 - 503332 + r 71 -6.8 -4.1196 | CATTAAAGGGCGTTG TCTTTGAT AAA ATCAAGGA TTTTAAAGCTCGCTT HPSH_02595 504578 - 503301 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 458 503536 - 503551 + g 83 -9 -4.11751 | TTTTGTTGATCGTCT TCGGCT TTAA AGCCGA TTTTAACGAATTGAT HPSH_02600 505558 - 504575 - | UDP-GlcNAc C6 dehydratase TERM 459 504647 - 504661 + g 75 -5.6 -4.75404 | GTATTCAAAATCAGG GGCGAC TTT GTGGCC TTTTTCGTGGAGTTT HPSH_02605 507325 - 505562 - | outer membrane protein P1 TERM 460 506907 - 506895 - G 70 -7.7 -3.71607 | TGAACACGATTGAAA GCTTG TTG CAAGC CATTGGTAGCGGCCG TERM 461 507333 - 507343 + r 76 -6.8 -4.57218 | TTTTTCATTGGAGTT CGCT GTC AGCG TTTTCATTATCTTCT HPSH_02610 507939 - 507322 - | hypothetical protein HPSH_02615 508563 - 507958 - | hypothetical protein HPSH_02620 509007 - 508903 - | hypothetical protein HPSH_02625 509520 - 509236 - | dna-binding protein hu TERM 462 509573 - 509553 - R 100 -10.5 -4.19472 | opp_overlap 509552 509553 509557 TAATAGATGCTAAAA CCAAGCGAT TTG ATCGCTTAG CTTGATTGATTGAGC engA 511047 - 509662 - | GTP-binding protein EngA TERM 463 509945 - 509960 + g 77 -6.2 -4.59117 | opp_overlap 509945 509944 CGTTTGGAAAAACAC TCATAG ACTT CTATGA TTTTATGCTTGATTT TERM 464 511723 - 511713 - g 76 -6.8 -4.39287 | TTAATGACACTAAAA CGCA AAT TGCG CAATTTAAGGGCAAA HPSH_02635 511124 - 512008 + | hypothetical protein TERM 465 512280 - 512268 - g 76 -9.1 -3.70902 | opp_overlap 512268 TTTTGCACATTGAAA GCGAG TTG CTCGC TCATATGGGAGGTTG speE 512093 - 512881 + | spermidine synthase TERM 466 513396 - 513384 - g 74 -4.7 -4.86133 | GATATAGAGCAAAAA CGCGC CAT GAGCG ATTGCATTATAGACA coaE 512883 - 513473 + | dephospho-CoA kinase TERM 467 513907 - 513897 - g 72 -3.2 -5.00895 | CCCACGAGATAAAAA CAGA GTG CCTG GAGGGAGTAGCGGAG TERM 468 514112 - 514126 + G 85 -7.2 -4.86731 | opp_overlap 514111 514114 CTATCACGCAAAATG TAGAAG ACG CTTCTA TTTTATTTGACGCAA gatA 513532 - 514893 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 469 516309 - 516296 - g 79 -6.7 -4.64861 | CGGGGTTAAAAGAAA GCCAT GTGC ATGGC GTGGATATTACTAAA HPSH_02655 514903 - 516348 + | inositol-5-monophosphate dehydrogenase TERM 470 516436 - 516418 - f 85 -9 -4.10429 | opp_overlap 516405 516412 AATGAGTTTTTAAAA CTTAATTG CTA CAATTAAG GAAATTTTCAATAAG HPSH_02660 516470 - 517150 + | F0F1 ATP synthase subunit A HPSH_02665 517242 - 517147 - | hypothetical protein TERM 471 517180 - 517191 + g 81 -3 -5.67063 | TTTGGCTTTAATATT GTTT TTTA AAAC TTTTTTTATGGTAAA HPSH_02670 517470 - 517718 + | RNA binding protein TERM 472 517718 - 517747 + T 70 -8.1 -3.29549 | gap 1 TCCTAAAAAGTTTTA GTAGCATTAGAAAA TAA TTTTCTAATGC-GC TTCCATTCTCTTAAT TERM 473 517792 - 517802 + T 71 -6.8 -4.15854 | opp_overlap 517792 517791 CATAGAAGCTAAAAG GGGT AAA ACCC TTTTAAAATCCATTT HPSH_02675 518742 - 517921 - | lipooligosaccharide 5G8 epitope biosynthesis-associated protein (lex2B) TERM 474 518874 - 518903 + r 71 -7.9 -3.58564 | opp_overlap 518875 518882, overlap 518875 ATGTTTGAAGCGAGA ACTCATAACCCTA AATC TAGGGTCATGAGC TTGATTTAATGGTGT TERM 475 518875 - 518902 + r 83 -11.4 -2.74415 | opp_overlap 518875 518882, overlap 518874 TGTTTGAAGCGAGAA CTCATAACCCTA AATC TAGGGTCATGAG CTTGATTTAATGGTG TERM 476 518902 - 518875 - R 95 -13.6 -3.41878 | opp_overlap 518875 518874, overlap 518882 TGTTTGAAGCGAGAA CTCATAACCCTA AATC TAGGGTCATGAG CTTGATTTAATGGTG HPSH_02680 519844 - 518909 - | thioredoxin reductase TERM 477 519338 - 519315 - G 71 -6 -4.2349 | opp_overlap 519315 GGCGCACACCTAAAA CCATCTCTTC TGTG GATGAGATAG ACTTTTTTGCAGATG TERM 478 519776 - 519760 - G 90 -8.7 -4.86731 | opp_overlap 519761 CTTTTTCAAATAAAA CGGCGTT TTT AACACCG CCTCTAGTGGCATAA HPSH_02685 520170 - 519850 - | thioredoxin HPSH_02690 520603 - 520259 - | hypothetical protein HPSH_02695 521869 - 520604 - | homoserine dehydrogenase uvrC 523664 - 521880 - | excinuclease ABC subunit C TERM 479 522539 - 522550 + g 76 -2.2 -5.4833 | CTTCTAAAATCAGAT CTTC ATTA GAGG TTTTTTCTTGGCTAA HPSH_02705 524126 - 523665 - | hypothetical protein HPSH_02710 524118 - 524297 + | hypothetical protein TERM 480 524292 - 524334 + Tr 80 -6.5 -4.83169 | gap 1 GAATTTTTAAATCAG CCTTA-AAATCACGGCTCTT ATTT AAGGGCTTTGATTTCTAGGG TTTTTGTGGCCAACT HPSH_02715 524950 - 524309 - | osmoprotection protein (proV) TERM 481 524775 - 524785 + g 71 -6.8 -4.08216 | opp_overlap 524762 AAGATTTTAACGCTC CCCA AAC TGGG TTTTAAAAGCCCTAA HPSH_02720 526613 - 524952 - | osmoprotection protein (proWX) HPSH_02725 527230 - 526793 - | hypothetical protein motB 528001 - 527234 - | flagellar motor protein MotB TERM 482 527534 - 527548 + g 75 -5.6 -4.7329 | opp_overlap 527533, overlap 527536 TCTCACATTAATATG CACCCT TTT AGGGAG TTTTTGAATGATTTT HPSH_02735 528777 - 528004 - | flagellar motor protein MotA TERM 483 528323 - 528294 - G 77 -10 -3.34233 | opp_overlap 528321, overlap 528285 GCATAAGCCCCATAA CCGCCCCCACTA ACCCCA TAGTCGGAGCGG TCTCGCCGGCCGTTT HPSH_02740 529560 - 528793 - | thiamin biosynthesis protein (thiF) TERM 484 528823 - 528869 + g 76 -2.4 -5.44119 | gap 1, opp_overlap 528840, overlap 528828 528832 528840 528866 TTGTAAATGCGTGAT TTTATGCGTGCCACAAACCCT ACATTC AGGGTTTTTGG-GTGCTTGAA TTTTTTTAAAATCCA TERM 485 529063 - 529047 - G 80 -6.5 -4.72272 | overlap 529052 GGGGCTTATCAAAAA CACACGC TAA GCATGCG CTATTGGGTAAAACG HPSH_02745 530178 - 529561 - | hypothetical protein TERM 486 529811 - 529796 - G 86 -11.8 -3.3382 | TCTATGATAGAGCAA CCGGGC GTGT GCCCGG GAAAATGCCAATATT HPSH_02750 530311 - 531321 + | hypothetical protein HPSH_02755 531511 - 531630 + | hypothetical protein TERM 487 531752 - 531762 + G 78 -2.6 -5.47159 | opp_overlap 531752, overlap 531758 TTGGGATAAAAGGGA TTTT TTG AAAA TTTTTCTTTCTTGCA HPSH_02760 531690 - 532082 + | hypothetical protein HPSH_02765 532124 - 532663 + | N-6 adenine methyltransferase fliL 532672 - 533223 + | flagellar basal body-associated protein FliL TERM 488 533281 - 533306 + F 78 -7 -4.30719 | opp_overlap 533281, overlap 533273 533283 GAAAAGTGTGTAAAA CGCTTTAAAA TGAAGT TTTTAGAGCG TTTCTTATCGCCAAG acpS 533290 - 533586 + | 4'-phosphopantetheinyl transferase HPSH_02780 533692 - 533826 + | iron(III) dicitrate transport protein (fecA) HPSH_02785 534450 - 533830 - | hypothetical protein HPSH_02790 534532 - 535368 + | putative lipopolysaccharide biosynthesis protein TERM 489 536220 - 536235 + G 70 -2.6 -5.02074 | TGCGTTTCCACCCTA TCAAAG AGGA TTTTGA TTTTTTAACGACTGG HPSH_02795 535451 - 536485 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein HPSH_02800 536665 - 537411 + | hypothetical protein TERM 490 537635 - 537654 + G 74 -5 -4.82901 | opp_overlap 537629 537635, overlap 537624 GGCTCTAAAGAACAT TTAGTGGT TTTC ACCCCTAA TTTTTCTCAAAACCC ribA 537530 - 538108 + | GTP cyclohydrolase II HPSH_02810 538182 - 538403 + | molybdopterin converting factor, subunit 1 (moaD) HPSH_02815 538404 - 538841 + | molybdopterin converting factor, subunit 2 mogA 538854 - 539384 + | molybdenum cofactor biosynthesis protein moaC 539393 - 539869 + | molybdenum cofactor biosynthesis protein C TERM 491 540042 - 540030 - g 72 -3.3 -5.08824 | overlap 540031 TTTGCATGGAAAAAA TGCCT TTT AGGCG CGAGCGTGGTGGCTT HPSH_02830 539988 - 540770 + | flagellar sheath adhesin HPSH_02835 540796 - 541632 + | outer membrane protein (omp18) TERM 492 542819 - 542829 + G 73 -5.4 -4.5442 | opp_overlap 542819 GATGCGACAAAAAGC GTGA AAA TCAC TTTTATCATTGACGC tig 541745 - 543100 + | trigger factor clpP 543121 - 543708 + | ATP-dependent Clp protease proteolytic subunit TERM 493 543759 - 543776 + G 80 -6.3 -4.78077 | opp_overlap 543750 543759 CTAAAATCTTAAGAA CGATTTC TAAA GAGATCG TTTCTTTTGATTCAA def 543713 - 544240 + | peptide deformylase TERM 494 544795 - 544777 - g 73 -2.4 -5.22312 | ACCCACACGAAAAAA CTACCCTT TAA AACGATAG AATTGAACGATAAAG TERM 495 545154 - 545167 + G 84 -2.4 -5.86965 | opp_overlap 545145 CGAAATCGCGCTAGC GCAT AACGGC ATGC TTTTTTTTGATGAAT TERM 496 545399 - 545388 - g 70 -3.6 -4.9218 | opp_overlap 545390, overlap 545372 CACGCAGTATAAAAA CCGC TTGA GCGA GCCTTTTTTGGACAG HPSH_02855 544243 - 545763 + | sigma-54 interacting protein TERM 497 545895 - 545878 - g 70 -2.7 -5.0133 | GATTGTGTGAAAAAA GCTCAAA TCAA TTTCAGC ACCAGTAAGTTGTTT HPSH_02860 545788 - 547848 + | cadmium-transporting ATPase TERM 498 548023 - 548013 - g 79 -6.8 -4.58283 | opp_overlap 548013 GAATTTTGGGAAAAA GGGA CTA TCCC TTGGTTTAGAATGGA TERM 499 548174 - 548209 + G 77 -4.8 -5.00616 | opp_overlap 548202 548205, overlap 548152 548175 548179 548193 548198 548202 AGGAGAGCATGCCCT TTTAATCGTTGATTCG TTAG CGAATCAACAATTCAC TTTTTTAAGCAAAAA TERM 500 548175 - 548208 + G 72 -8.3 -3.60048 | opp_overlap 548202 548205, overlap 548152 548174 548179 548193 548198 548202 GGAGAGCATGCCCTT TTAATCGTTGATTCG TTAG CGAATCAACAATTCA CTTTTTTAAGCAAAA TERM 501 548179 - 548204 + G 74 -9.1 -3.52177 | opp_overlap 548202, overlap 548152 548175 548174 548193 548198 548202 AGCATGCCCTTTTAA TCGTTGATTCG TTAG CGAATCAACAA TTCACTTTTTTAAGC TERM 502 548198 - 548236 + G 70 -8.5 -3.33419 | gap 1, opp_overlap 548202 548205, overlap 548179 548175 548174 548193 548202 TGATTCGTTAGCGAA TCAACAATTCACTTTTTT AAGC AAAAAAGCGAATTG-TGA TATTGCTTTAGACAT TERM 503 548233 - 548202 - g 87 -12.6 -3.37344 | opp_overlap 548179 548175 548174 548202 548198 548193, overlap 548205 TCGTTAGCGAATCAA CAATTCACTTTTTT AAGC AAAAAAGCGAATTG TGATATTGCTTTAGA TERM 504 548202 - 548233 + G 73 -10.4 -2.83396 | opp_overlap 548202 548205, overlap 548179 548175 548174 548198 548193 TCGTTAGCGAATCAA CAATTCACTTTTTT AAGC AAAAAAGCGAATTG TGATATTGCTTTAGA TERM 505 548230 - 548205 - g 77 -8.5 -3.82604 | opp_overlap 548175 548174 548202 548198 548193, overlap 548202 TTAGCGAATCAACAA TTCACTTTTTT AAGC AAAAAAGCGAA TTGTGATATTGCTTT TERM 506 548477 - 548462 - g 70 -2.6 -5.08011 | AAAAGCGCGAAAAAA GCAATA CCAG TATTAC CAAAACATGCTTTTA TERM 507 548592 - 548578 - g 72 -8.6 -3.61371 | opp_overlap 548571 AAACCTTACTCCAAA CCTTAG CGC CTAAGG GGGTGGAGTTTAGGA HPSH_02865 547884 - 549158 + | anti-codon nuclease masking agent (prrB) TERM 508 549329 - 549354 + T 80 -9.1 -3.53761 | opp_overlap 549335 549336, overlap 549322 549336 ATTTCTTAGGCGTTT TAACAACCCCT TTTA AAGGGTTGTTA TTTGAAGAGGGCTTA TERM 509 549336 - 549348 + T 76 -7.7 -4.08557 | opp_overlap 549335 549336, overlap 549322 549329 AGGCGTTTTAACAAC CCCTT TTA AAGGG TTGTTATTTGAAGAG HPSH_02870 550866 - 549367 - | outer membrane protein HofF TERM 510 550032 - 550016 - G 74 -5.1 -4.82548 | GAAAAATAGACAAAA GGCTGAA TGC TCCAACC CTTGTAATTCCAAAT TERM 511 550514 - 550525 + g 71 -7.2 -3.86283 | TAGTTCCATGTCATA GCCC CATA GGGC TTTCCTGTAACTTCG TERM 512 551063 - 551076 + r 72 -2.5 -5.38958 | ATTGTTTTTTTTAAT TTTTA AGGA TAAAA TTTTTCTTTGTCAGT HPSH_02875 552432 - 551146 - | lipoprotein release system transmembrane protein TERM 513 551745 - 551712 - GR 93 -10.3 -3.9712 | opp_overlap 551716 GCACCCCATCATAAA GCCCTAAGGGCAATC TCCT GATCGCGCTTATGGC TTGAAGGCTAGAATA HPSH_02880 554965 - 552368 - | preprotein translocase subunit SecA lolA 555085 - 555666 + | outer-membrane lipoprotein carrier protein HPSH_02890 555825 - 555691 - | hypothetical protein TERM 514 556190 - 556200 + G 91 -8.2 -5.18371 | CTCGTTTTAGAAGGT GGGC GTT GCCC TTTTATTTTGTGAGC TERM 515 556396 - 556379 - g 70 -2.7 -5.14965 | ATTTGCATGAAAAAA TCAAACA TTTG CGCTTGA TCTTAGAGCCTAAAC TERM 516 556663 - 556639 - g 74 -6.5 -4.4715 | opp_overlap 556639, overlap 556661 GCCGAATTGAGAAAA GCCATTAATTT CCA AAAACAATGGC TCAATTCTACCAAGC HPSH_02895 556159 - 556686 + | hypothetical protein HPSH_02900 558060 - 556693 - | hypothetical protein TERM 517 556745 - 556755 + g 73 -6.8 -4.15222 | CTGTCTTGTGTGTTC GCCT TAA AGGC TTTATTAAAAGGGCT TERM 518 557020 - 556974 - G 71 -6.6 -3.96932 | overlap 556947 AGACATATCCAGAAA CAGCGTCTGCGGTAAGAGCGTT ACT AAAAATCCTACCATAAACGCTG TTGTTTCTGATGTTA HPSH_02905 559443 - 558154 - | hypothetical protein TERM 519 558257 - 558267 + g 74 -4 -5.0538 | opp_overlap 558255 TTGTCTTCTAAACTC TCTT GAA AAGA TTTTTTAAAATGCGG TERM 520 558623 - 558586 - G 79 -5.1 -5.06103 | gap 1, opp_overlap 558587 558587 558590 558594, overlap 558587 558588 558590 AGAATTTTTAAAAAA CGCATCATTTTTTCTAAA ATT TTTAGAAAAACTGGTG-G CTTGCTTGTAAGAAA HPSH_02910 559965 - 559843 - | hypothetical protein TERM 521 560033 - 560013 - R 81 -9.1 -3.71873 | overlap 560018 TCAGCCACAGCTAAA TAAAAGGGA TCG CCCCTTTTA ATGCAAAACTAGAGC TERM 522 560028 - 560018 - R 73 -4.6 -4.92385 | overlap 560013 CACAGCTAAATAAAA GGGA TCG CCCC TTTTAATGCAAAACT HPSH_02915 562600 - 560042 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 523 563013 - 562994 - g 79 -3.6 -5.36441 | overlap 563007 563011 TGTGGATACAAAAAA CGCTTT TGATAAAG AAAGCG CCTCTTCAAACGCCC HPSH_02920 562731 - 563414 + | hypothetical protein TERM 524 563933 - 563943 + G 84 -8.2 -4.66163 | TTTTTGGTGCTGGCA CGGG AAA CCCG TTTTTCACTACGGAT pyrH 563524 - 564246 + | uridylate kinase TERM 525 564358 - 564370 + G 70 -2.7 -5.16841 | AACGACCGCTACATG CTAGA TAA TTTAG TTTTTGTTCGTGTGA HPSH_02930 564289 - 564513 + | DNA-directed RNA polymerase subunit omega TERM 526 564893 - 564933 + G 86 -9.7 -4.08945 | AAAGAAGAGTTAGGA GTGAGCGCTCAAGATCCCA GAA TGGTGGTTTCAGCGCTCAC TTTTAGAAAGATCCT TERM 527 566127 - 566116 - g 70 -3 -5.00846 | overlap 566110 GAAAGATTACAAAAA CTTT GAAG AAAG ATTAACAGATTGTGG HPSH_02935 564500 - 566830 + | penta-phosphate guanosine-3'-pyrophosphohydrolase (spoT) TERM 528 567211 - 567224 + G 76 -6.7 -4.43309 | opp_overlap 567211 ATTTTAGATCAAAAA CACAC CGAA GTGTG TTTTAATTCCACTTG TERM 529 567224 - 567211 - g 81 -6.7 -4.80882 | opp_overlap 567211 ATTTTAGATCAAAAA CACAC CGAA GTGTG TTTTAATTCCACTTG HPSH_02940 566851 - 568059 + | tyrosyl-tRNA synthetase HPSH_02945 568070 - 569161 + | hypothetical protein TERM 530 569795 - 569782 - g 90 -5.3 -5.69473 | TATAGCAGAAAAAAA TGATG CTTT CATCA AAACCAAGCGCAAAA HPSH_02950 569168 - 570490 + | N-acetylmuramoyl-L-alanine amidase HPSH_02955 570509 - 571246 + | hypothetical protein TERM 531 571475 - 571488 + T 70 -2.3 -5.23292 | opp_overlap 571474 571475, overlap 571474 571470 CACATCTCTATAAAG CTCTC TAGC GAGCG TTTTGTTTTCTATAA HPSH_02970 573019 - 572414 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 532 573823 - 573844 + G 71 -5.2 -4.62302 | GCTATCAATTTGGCA TTATCGCT CCGCAT AGCGATGA TTTTTGCCAATCTTG TERM 533 574057 - 574028 - g 70 -3.5 -4.98255 | opp_overlap 574036, overlap 574030 GTGGAATGATAAAAA CAGCGAAACTCCC ACAA GGGCGTTTTACTA TACAGGGGGGTAGGA moaA 573189 - 574070 + | molybdenum cofactor biosynthesis protein A HPSH_02980 574412 - 574203 - | hypothetical protein TERM 534 574362 - 574334 - Gg 80 -2.3 -5.65177 | overlap 574337 AGATCGAGAAAAAAA CAGCAATATCGCC AAT GCCGCTATCGTTG GGGCAGTCAGTGAAG HPSH_02985 574311 - 574646 + | hypothetical protein HPSH_02990 574528 - 574854 + | hypothetical protein HPSH_02995 574871 - 575764 + | hypothetical protein HPSH_03000 575776 - 576630 + | hypothetical protein TERM 535 576753 - 576735 - g 85 -3.8 -5.59502 | TAAAAAATCAAAAAA GCAAACAA CCC TTGATCGC TTCCCTTGCACCTCT HPSH_03005 576670 - 577035 + | hypothetical protein HPSH_03010 577937 - 577044 - | cell division protein (ftsY) HPSH_03015 578501 - 577944 - | hypothetical protein HPSH_03020 578626 - 579273 + | hypothetical protein HPSH_03025 579251 - 580762 + | hypothetical protein HPSH_03030 582016 - 580763 - | hypothetical protein TERM 536 581682 - 581671 - G 76 -2.2 -5.41143 | CATTTTTTAAAAAAA CACT CGGT AGCG CGATGACTAAGACTT HPSH_03035 583392 - 582079 - | hypothetical protein HPSH_03040 583469 - 583386 - | hypothetical protein TERM 537 583421 - 583446 + g 86 -10.6 -3.90744 | opp_overlap 583420 583419 583438 TAAAATGAAAATACC GCGCAAAAAT GATAGA ATTTTTGCGC TTGTTTAGCGCAAAA TERM 538 583462 - 583438 - G 88 -11.6 -3.72037 | opp_overlap 583421, overlap 583420 583419 GCAAAAATGATAGAA TTTTTGCGCT TGTTT AGCGCAAAAA ACCACACCTACCATG HPSH_03045 584397 - 583519 - | carbon-nitrogen hydrolase TERM 539 584278 - 584301 + g 86 -4.7 -5.43866 | gap 1, opp_overlap 584283 GTTTAATTCTTGCAA CACCACTAAA TTGGT TTTAG-GGTG TTTTTTTAGCGCTTG HPSH_03050 584547 - 584401 - | hypothetical protein HPSH_03055 585235 - 584576 - | molybdopterin biosynthesis protein HPSH_03060 585527 - 585288 - | hypothetical protein fliS 585894 - 585514 - | flagellar protein FliS fliD 587999 - 585942 - | flagellar capping protein HPSH_03075 588375 - 588016 - | flagellar protein FlaG HPSH_03080 589672 - 588470 - | hypothetical protein TERM 540 588719 - 588735 + g 71 -5.1 -4.56597 | overlap 588721 GTCTAAAACATTACG CACCAAA GCG TTTGGGG TTTTTGACACGAGCG TERM 541 589061 - 589073 + g 73 -7.7 -3.84992 | ATAATCTTTTTGCAT GCTCA AAA TGAGC TTATCTTGTTCGGTT TERM 542 589123 - 589143 + g 74 -4 -5.1101 | overlap 589124 CTTCACGAGTTTTTT GCTCATCT ATGAC AGATGAGA TTTTTTGAATGCTGC TERM 543 589483 - 589538 + g 72 -9.3 -3.31294 | gap 2, overlap 589485 TTTGGCGCTCCATCT CAGCTTTTTGAAGCTCTTTAGAGCGGA TCGC TTCGC-CTAAAGAACT-CAAACGGCTG TTCAATTGGTTTTTT HPSH_03085 590471 - 589665 - | cell division membrane protein (ftsX) HPSH_03090 591129 - 590458 - | cell division protein TERM 544 590905 - 590917 + g 73 -7.7 -3.83155 | opp_overlap 590902 CAAATCTAAAATCGT CGCTT TTG AAGCG TTGTTCATGTTGATA trmB 592307 - 591126 - | tRNA (guanine-N(7))-methyltransferase TERM 545 591684 - 591695 + g 76 -2.2 -5.37345 | AAATTTTTCGCTTAA CACT CGGC GGTG TTTTTTCTCATTCCA TERM 546 592264 - 592246 - G 86 -4.5 -5.50723 | opp_overlap 592247, overlap 592247 CTATGAAAACAAAAA TCCCCTT CAATT AAGGGGT ACTCTAAAGGTTTAA TERM 547 592263 - 592247 - G 73 -8 -3.88807 | opp_overlap 592247, overlap 592246 TATGAAAACAAAAAT CCCCTT CAATT AAGGGG TACTCTAAAGGTTTA HPSH_03100 593565 - 592318 - | hypothetical protein HPSH_03105 594511 - 593528 - | hypothetical protein TERM 548 596635 - 596647 + G 74 -4.8 -4.7033 | TCAAATTCTTGCCTA TCGC AACGA GCGA TTTTATCTTCGCTTA HPSH_03120 595914 - 597035 + | rod shape-determining protein (mreB) HPSH_03125 598085 - 597129 - | ribose-phosphate pyrophosphokinase HPSH_03130 598153 - 598082 - | hypothetical protein HPSH_03135 598635 - 598150 - | histidine triad (HIT) family protein HPSH_03140 600057 - 598645 - | UDP-MurNac-pentapeptide presynthetase (murF) TERM 549 599502 - 599531 + g 82 -11.5 -3.09987 | opp_overlap 599495 599492, overlap 599493 599493 TAATATCATTCGCAA GCCCTAAAAGGGT ATTG ACGCTTTTGGGGC TTGCATGCGTGTTGA HPSH_03145 600835 - 600113 - | 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase ddl 601878 - 600835 - | D-alanyl-alanine synthetase A TERM 550 601783 - 601773 - G 78 -2.6 -5.47218 | TTTCATCTAAAAAAA TAAA ATA TTTA ATCCTACCCTTTAGC HPSH_03155 602432 - 601956 - | phosphatidylglycerophosphatase A TERM 551 602359 - 602369 + g 72 -3.2 -5.0538 | ACTAAACTCCCTATC GTTC CTG GAGC TTTTTTAGAATACCC TERM 552 603111 - 603098 - g 71 -6.7 -4.06687 | opp_overlap 603097 603098 AGCCTTTAGAAATAA CGCAT ATTG ATGCG CTCATTGGAGGGAGT TERM 553 603380 - 603367 - g 76 -2.3 -5.48163 | AAAGAAACTAAAAAA GTCGC TTTA GCCAC TCAAAAAGCCGTTTT HPSH_03160 602536 - 603690 + | putative aminotransferase HPSH_03165 603699 - 604160 + | xanthine guanine phosphoribosyl transferase (gpt) TERM 554 605118 - 605130 + G 70 -9.1 -3.22274 | GTTTTTAGACGAGTT CCGGT TTG ACCGG TTGAATATCTTTGCT HPSH_03170 604162 - 605481 + | hypothetical protein HPSH_03175 605499 - 605726 + | hypothetical protein TERM 555 606156 - 606128 - f 79 -8.1 -4.05067 | overlap 606126 TATGTTACAAAAACA CCCGCTCCTCC GCAAAAA GGAGAAGAGGG AAAAGAGGGAACGAT HPSH_03190 606787 - 607221 + | hypothetical protein TERM 556 608088 - 608074 - f 86 -5 -5.68023 | TGACAATCAAAAAAA GAAATC TTA GATCTC ATCAATGATGAAACC TERM 557 608325 - 608357 + F 70 -4.1 -4.80396 | opp_overlap 608321 608328, overlap 608327 608328 AACGCACCAACGCCA AAACGCTTGCTAGTT TTT GGCTAGTAAGCGGTG TTTTTCAATCTTTTA TERM 558 608328 - 608354 + F 80 -10.2 -2.98079 | opp_overlap 608321 608328, overlap 608327 608325 GCACCAACGCCAAAA CGCTTGCTAGTT TTT GGCTAGTAAGCG GTGTTTTTCAATCTT TERM 559 608354 - 608328 - f 71 -6.6 -4.20696 | opp_overlap 608328 608327 608325, overlap 608321 GCACCAACGCCAAAA CGCTTGCTAG TTTTTGG CTAGTAAGCG GTGTTTTTCAATCTT HPSH_03210 608386 - 608691 + | hypothetical protein TERM 560 609226 - 609244 + G 78 -3.8 -5.26119 | overlap 609227 609242 AAGAATATTTGATCA TGCAAGAA AAT TTCATGCG TTTTGTTTTTGGCAA TERM 561 609242 - 609264 + G 72 -3.4 -5.1615 | overlap 609227 609226 609255 GCAAGAAAATTTCAT GCGTTTTGTT TTT GGCAAAAGGC TTTTTTACCTCTTAC HPSH_03215 608700 - 609767 + | hypothetical protein TERM 562 610504 - 610516 + G 70 -3.3 -4.9218 | overlap 610505 ACTTTTTTTAAGTAT TCGCA AAA TGCGC TTTTTATGGTGGATA HPSH_03220 609790 - 610821 + | hypothetical protein TERM 563 611326 - 611315 - gf 95 -4.4 -5.85737 | ACACCAATAAAAAAA TCAC AAGC GTGA AAGTGCGTTTAGGCT HPSH_03225 610915 - 611901 + | transcriptional regulator TERM 564 611891 - 611910 + GT 78 -2.8 -5.41746 | opp_overlap 611894, overlap 611894 TAGAATTGAATCAAA AAAGCGTT TGAA AGCGCTTG TTTTTTTAGCCAGTT TERM 565 611894 - 611907 + GT 72 -4.5 -4.79949 | opp_overlap 611894, overlap 611891 AATTGAATCAAAAAA GCGTT TGAA AGCGC TTGTTTTTTTAGCCA TERM 566 611907 - 611894 - gT 73 -2.3 -5.29385 | opp_overlap 611894 611891 AATTGAATCAAAAAA GCGTT TGAA AGCGC TTGTTTTTTTAGCCA TERM 567 612242 - 612252 + GT 76 -6.8 -4.36914 | GGGTCAAAAAGTGGG GGGT AAT ACCC TTTTATCCCAAGCCA HPSH_03230 611871 - 612788 + | outer membrane protein TERM 568 613257 - 613235 - T 71 -8.6 -3.02511 | opp_overlap 613222 613235 TTGAGCTGGTCAATA GCTCTTTAAA TTA TTTAAAAAGC TTTACCGAAAACAAC TERM 569 614302 - 614290 - T 75 -4.8 -4.91511 | ACCTTATGATAAAAA CGCT CCAGC AGCG GGCCAATACAACTAC TERM 570 614964 - 614982 + T 71 -7.4 -3.53012 | opp_overlap 614964 ACTGAGTGATCCAAA CCCTCTTT TTT AGAGGGGG TTTAGAAAAACCGCA TERM 571 614980 - 614964 - T 73 -8 -3.66999 | opp_overlap 614964 ACTGAGTGATCCAAA CCCTCT TTTTT AGAGGG GGTTTAGAAAAACCG HPSH_03245 616360 - 615029 - | anaerobic C4-dicarboxylate transporter TERM 572 615398 - 615384 - G 78 -4.2 -5.26875 | opp_overlap 615384 TCTGCAATCAAAAAA GAAGCG TAT CGCTTG ATTTCATCTAAATGA TERM 573 616106 - 616116 + g 70 -2.6 -5.03747 | GATTTGCTTGGGGTG TTTT CTT AAAA TTTTTTCAGCGATTT HPSH_03250 616445 - 617437 + | L-asparaginase II (ansB) HPSH_03255 617643 - 617446 - | hypothetical protein TERM 574 617586 - 617548 - G 70 -9 -3.19038 | overlap 617555 TTTAAAACCACCCAA GCATAAATCCCAAACA TCTTTAG TGTTTGGGATGAATGC CACTAATTTGTAGTA TERM 575 617579 - 617555 - G 79 -8.7 -4.06904 | overlap 617548 CCACCCAAGCATAAA TCCCAAACA TCTTTAG TGTTTGGGA TGAATGCCACTAATT TERM 576 617722 - 617707 - R 78 -7.6 -4.12942 | TCAAACTCTGTAAAA TCCCTA TGAT TAGGGA CACAGAGTGAAAACC HPSH_03260 617884 - 617777 - | hypothetical protein TERM 577 617892 - 617916 + r 93 -11.5 -4.05446 | opp_overlap 617899 AATAACATGCTTCTA TCCCAAACGCT AAA AGCGTTTAGGA TTTCTGCTTAAAGGG TERM 578 617989 - 618007 + r 70 -2.4 -5.2166 | overlap 617986 617985 TCTCATTTTCGCCAT GATCATCA TGA TCGTGATC TTTTTTGCCTTGTTC HPSH_03265 618439 - 617969 - | hypothetical protein TERM 579 618194 - 618212 + g 74 -5.2 -4.74132 | opp_overlap 618189 CGCTTCAAAATCCGC CACGGTCA TGT TGTCTGTG TTTTTAATCGCATAT TERM 580 618259 - 618270 + g 76 -2.2 -5.52384 | GGAACGCTTCTCTTT TGTC TTTA GGCA TTTTTTTCATGCGCA HPSH_03270 618890 - 618468 - | hypothetical protein TERM 581 619733 - 619749 + G 74 -6.5 -4.4448 | GTAACCGCCATCATG GGAACGC TTA GCGTTAC TTTATTTAGGGATTT HPSH_03275 619157 - 619789 + | hypothetical protein TERM 582 620864 - 620848 - g 77 -8.1 -4.21922 | overlap 620857 TTATTGAAAATGAAA TTCAAAG AAG CTTTGAA ACTCAAAGCCCTAGA TERM 583 620873 - 620857 - g 86 -9.5 -4.05629 | overlap 620848 ATGAAATTCAAAGAA GCTTTGA AAC TCAAAGC CCTAGACGATGCGAT HPSH_03280 619858 - 621573 + | DNA polymerase III subunits gamma and tau TERM 584 621896 - 621886 - g 78 -2.6 -5.47914 | AAAAATTAGAAAAAA TTTT AAA AAAA TACGATTTAGCTATT HPSH_03285 621570 - 621971 + | hypothetical protein HPSH_03290 621984 - 622706 + | putative abc transporter, ATP-binding protein TERM 585 622898 - 622873 - g 74 -4.8 -4.74801 | CAAGCGCATCAAAAA TTTTAGCGAT CGTTTT AGCGCTAAAA ATAGCAGCGATCATT TERM 586 623869 - 623852 - g 70 -2.7 -5.10461 | overlap 623854 CTCATTGAAGAAAAA TTCCATT TGAA AATGGTA AGAAGAACGATCACC HPSH_03295 622709 - 623953 + | RNA polymerase factor sigma-54 TERM 587 624687 - 624697 + G 79 -3.2 -5.45726 | TTCTGTTCCTGGTAG CGGT TTA ATCG TTTTTTTACCCTATG HPSH_03300 624274 - 625188 + | outer membrane protein HopH TERM 588 625239 - 625250 + T 79 -4.4 -5.28315 | opp_overlap 625239, overlap 625230 TGGTTGTCTTAAACA TGCT TTCG AGCA TTTTTTAGATTTTAT HPSH_03305 626516 - 625296 - | hypothetical protein TERM 589 626971 - 626956 - R 74 -6.1 -4.58283 | opp_overlap 626955 TAATTTTTCTAAAAA GCGCT TTACTT AGCGC ACTTCTTTATATCAA HPSH_03310 627863 - 626961 - | hypothetical protein TERM 590 627522 - 627543 + g 70 -2.9 -5.10154 | CAGCGTGCCATTATC CGGCGAG ACGAAATA CTGGCCG TTTTTAGTTTTCAAT HPSH_03315 628452 - 628108 - | hypothetical protein mraW 629398 - 628472 - | S-adenosyl-methyltransferase MraW TERM 591 629582 - 629596 + r 77 -8.6 -3.56821 | opp_overlap 629582 629580 629578, overlap 629584 AAGGGCTTAAAGATA CCCTTT TAA AAAGGG TTTAAAAAGTGTAGT TERM 592 629596 - 629582 - R 73 -8.6 -3.24976 | opp_overlap 629582 629584, overlap 629580 629578 AAGGGCTTAAAGATA CCCTTT TAA AAAGGG TTTAAAAAGTGTAGT HPSH_03325 630410 - 629598 - | Outer membrane protein/porin TERM 593 631960 - 631991 + G 90 -3.8 -5.94713 | overlap 631962 AAAAAAAGATCGCTG AACCCATTTTAAAA GAGA TTTTAGAAAGGGTG TTTTTTTTATACGAT TERM 594 631962 - 631989 + G 77 -6.4 -4.62054 | overlap 631960 AAAAAGATCGCTGAA CCCATTTTAAAA GAGA TTTTAGAAAGGG TGTTTTTTTTATACG TERM 595 632599 - 632587 - g 87 -4.9 -5.44721 | ACCATGCTAAAAAAA TTCAA AGC TTGAA TGGGGTGGAGATTGT uvrA 630594 - 633419 + | excinuclease ABC subunit A TERM 596 633493 - 633462 - T 83 -9.8 -3.72642 | AATGAACTACCGAAA TTATAAAAAATACT AAAA AGCATTTTTTATAA TCAATAGTAAAAAGC HPSH_03335 634427 - 633606 - | hypothetical protein HPSH_03340 635677 - 634532 - | transcriptional activator of flagella proteins TERM 597 635028 - 635047 + g 74 -4.9 -4.72272 | overlap 635030 635046 CCCATTTTAGGAGCT GTGGCGT CCGTGA ACGCCCC TTTTTGATACCCAAA HPSH_03345 636129 - 635674 - | hypothetical protein HPSH_03350 638627 - 636147 - | DNA gyrase subunit A TERM 598 636998 - 636984 - G 75 -2.8 -5.28176 | opp_overlap 636986, overlap 636986 GTTAGCCACAAAAAA GTTTTC AAT GAAATC GTCTTCATAAGTGTT TERM 599 637834 - 637849 + g 70 -3.3 -4.94811 | GTTTGAAAAGGCATT TCATC TAAAAC GATGA TTTCTTTATTTTTCG HPSH_03355 639033 - 638647 - | diacylglycerol kinase TERM 600 638721 - 638700 - G 70 -2.9 -5.12707 | opp_overlap 638716, overlap 638703 TGAAAGCCCAAAAAA TAAGCCCTA TCAG TTGGGCTGA ACTGGCCATGTCTTT TERM 601 638913 - 638903 - G 76 -6.8 -4.32846 | opp_overlap 638902, overlap 638910 638911 ACGATACAAAAAAGA GCCA AGA TGGC AATTTGCCTGAACGC TERM 602 639000 - 638976 - G 80 -2.3 -5.55769 | gap 1, opp_overlap 638955 638977 638978, overlap 638955 638977 CTTTAGAATAAAAAA GGGCTTTAAA AAGGCG TTTAAA-CCC TTTAGCTTTGGGGGG HPSH_03360 640039 - 639026 - | hypothetical protein TERM 603 639901 - 639919 + g 70 -8.8 -3.2794 | opp_overlap 639896 TGCCTACAATCCCCA CGCCCTTA ATC TTAGGGCG TTGATCTAAATAAGC TERM 604 640289 - 640311 + r 77 -9.2 -3.28712 | opp_overlap 640288 640287 GAGTGAAGAAAATTT GCTTGAGTTA AAT TAACCCAAGC TTGTAGCGCCAAGAG HPSH_03365 640862 - 640362 - | hypothetical protein HPSH_03370 643176 - 640879 - | N-methylhydantoinase HPSH_03375 645329 - 643188 - | hydantoin utilization protein A TERM 605 644771 - 644781 + g 84 -6.8 -4.87786 | CTCTAACGATCCGCT CGCT TTC AGCG TTTTTATGAGATTGC HPSH_03380 646549 - 645548 - | putative outer membrane protein HPSH_03385 648040 - 646676 - | short-chain fatty acids transporter TERM 606 647922 - 647896 - GH 71 -6.6 -4.05446 | TCCCCCAACTAGAAA TGACAGAAAAAG CGT CTTGCCCTGTCA AACCATAAACAAGAA HPSH_03390 647961 - 648104 + | hypothetical protein HPSH_03395 648682 - 648059 - | succinyl-CoA-transferase subunit B HPSH_03400 649377 - 648679 - | 3-oxoacid Coa-transferase, subunit A HPSH_03405 650563 - 649388 - | acetyl coenzyme A acetyltransferase (thiolase) (fadA) HPSH_03410 651221 - 650820 - | hypothetical protein TERM 607 650880 - 650891 + g 74 -4.4 -4.83615 | GCTTGAATAGGATTT TTCC TTAG GGAA TTTTTCTAAAAAATC HPSH_03415 652183 - 651311 - | putative type II restriction enzyme HPSH_03420 653400 - 652186 - | putative type II cytosine specific methyltransferase HPSH_03425 654267 - 653455 - | hypothetical protein TERM 608 653515 - 653526 + g 74 -4.4 -4.83615 | GCTTGAATAGGATTT TTCC TTAG GGAA TTTTTCTAAAAAATC TERM 609 654673 - 654687 + G 72 -10 -2.73619 | overlap 654672 ATCTCATTCTTAATG TGGTGG ATT CCACCA ATTTAGAGCGTAATT HPSH_03430 654393 - 656339 + | iron(II) transport protein TERM 610 657845 - 657864 + G 70 -2.8 -5.05116 | gap 1, opp_overlap 657844, overlap 657845 ACCGATATTATCAAT GG-GGTGTG CCA CATGCCTCC TTTTGTTCTTTCTAA HPSH_03435 656582 - 658885 + | iron(III) dicitrate transport protein fliP 659670 - 658924 - | flagellar biosynthesis protein FliP TERM 611 659473 - 659455 - G 76 -2.4 -5.42198 | gap 1 CCTTAAAAAAGAAAA CACCACG ATCAAA CG-GGTG AAGCTCGTCATCACT HPSH_03445 659801 - 659649 - | hypothetical protein TERM 612 660037 - 660055 + GH 93 -8.8 -4.68645 | opp_overlap 660031 GATAAAACGCCTATC CCCACTCA ACA TGAGCGGG TTTTGATTTTGAATG HPSH_03450 659800 - 661059 + | UDP-N-acetylglucosamine pyrophosphorylase (glmU) HPSH_03455 661324 - 661653 + | hypothetical protein HPSH_03460 661752 - 662150 + | hypothetical protein TERM 613 662545 - 662562 + G 87 -3.4 -5.75478 | ACACGCCTAATTGGA GCTTTG TCGCCT CAAGGC TTTTTTTGTATGATT TERM 614 664006 - 663994 - g 70 -7.7 -3.66178 | TGGGTGAAGCGCAAA TGCTC GCA GAGCA TCAAATCGCTTGGGG TERM 615 664163 - 664151 - g 70 -9.1 -3.23711 | opp_overlap 664150 TTCAGAATGGAGTAA GGGGA TTT TCCCC ATTGATAAAGCCAAT HPSH_03465 662322 - 664688 + | ribonucleotide-diphosphate reductase subunit alpha TERM 616 665206 - 665196 - g 72 -3.2 -5.04175 | overlap 665190 CGAATTAGACAAAAA CCCT AGC AAGG TGTTTGACATCACGC HPSH_03470 664750 - 665697 + | putative lipopolysaccharide biosynthesis protein TERM 617 665851 - 665866 + F 71 -6.8 -4.17762 | TCATTGTCCCTATCA TGCTCG CAAC CGGGCA TTCTTTTGAAGAATC HPSH_03485 666524 - 667030 + | methylated-DNA--protein-cysteine methyltransferase (dat1) HPSH_03490 668163 - 667093 - | integrase-recombinase protein TERM 618 667791 - 667779 - G 80 -6.2 -4.67353 | CTATGTAGCTAAAAA GCCC AAGTA GGGC GATCCTGTAATTTTT TERM 619 667883 - 667897 + g 79 -3.6 -5.47431 | TCAATGCTTTTGAGC GATTTT AAA GAAATC TTTTTTGTGTATTCG HPSH_03495 668289 - 668170 - | hypothetical protein HPSH_03500 669585 - 668413 - | aspartate aminotransferase TERM 620 668651 - 668663 + g 74 -4.9 -4.66609 | AAAGCGTTCAGCCCC TCAAT CGC ATTGA TTTTTGCGTGGGCTA TERM 621 669677 - 669657 - R 76 -4.1 -5.055 | overlap 669669 CTAATTTTCAAAAAA CTTTCAAAA ACA TTTCAAAAG AAAGCAAGAGATTGT TERM 622 669725 - 669702 - R 89 -9 -4.63932 | GATTGTGTAAGAAAA CTCTAATTGA AAAT CCAATTAGAG AAAAACAAGCGTTTT HPSH_03505 670556 - 669744 - | outer membrane protein HorF HPSH_03510 670757 - 670659 - | hypothetical protein TERM 623 670732 - 670771 + g 82 -11.6 -3.24161 | opp_overlap 670731 670730, overlap 670731 GTTTTGGGATAAATG GGGTATAAGGAAGCGT TTGTTTTC ACGCTCTCTTATACCC TCTTATACCCCTTTG HPSH_03515 675029 - 670800 - | hypothetical protein TERM 624 671540 - 671561 + gr 77 -8.9 -3.66896 | GAGCGTCTTTATCCG GGAAAATTT TTGA AAATTTTCC TTGTCTGTGTATCCA TERM 625 671939 - 671954 + gr 83 -3.2 -5.53079 | overlap 671916 671933 AATTGGTGTCAAAAA CGCTAG GGTT TTGGCG TTTTTTGTCTCTTTT TERM 626 672183 - 672171 - GR 75 -2.7 -5.24129 | GTCTTTGACAAAAAA GATAA TCG CTATC GTCACCCTTGATCCG HPSH_03520 675625 - 674993 - | hypothetical protein HPSH_03525 676992 - 675703 - | anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) TERM 627 676054 - 676064 + g 89 -6.8 -5.24531 | GATAGTCTCTTTTTT TCCC TTA GGGA TTTTTTCTAAAAGAT HPSH_03530 678362 - 676989 - | coproporphyrinogen III oxidase TERM 628 678026 - 678012 - G 79 -3.5 -5.41746 | gap 1, overlap 678013 AATGGGCGAAAAAAA GGTCGG CGTA CCG-CC TCCATAGTGGAATTG HPSH_03535 678877 - 678362 - | hypothetical protein TERM 629 678626 - 678638 + g 73 -7.7 -3.94381 | TTCCGCCCTAAGCCT GGCTT CAA AAGCC TTTCTGGCGTTCTCT HPSH_03540 680012 - 678915 - | chorismate synthase TERM 630 679509 - 679490 - G 77 -6.4 -4.62783 | opp_overlap 679493 679507 CATCTAGGGCAAAAA TCTCGCTT TTTA AAGCGTGA TTAAAATCATAATTT rnc 680725 - 680009 - | ribonuclease III TERM 631 680035 - 680049 + gr 75 -10 -2.62293 | overlap 680034 CCTTAAGTTTTTGAA GCGCTT GAT AAGCGC ATTGCTGTTCGGCTT TERM 632 680403 - 680386 - GR 73 -7.1 -3.96148 | CTCTCCCATTAGAAA TTTCTTC AGAA GAAGAAA TGTGCAAATAATCTT rnhA 681164 - 680700 - | ribonuclease H HPSH_03555 682167 - 681151 - | hypothetical protein TERM 633 682031 - 682041 + g 88 -2.6 -6.01725 | overlap 682030 TGATTTTGGGCGAAT TTTT GTA AAAA TTTTTTGTTTTTCTT TERM 634 682144 - 682132 - G 71 -4.9 -4.59081 | TAAAGCGATAGAAAA TAAAG AAT CTTTA TAGAGGAAATTAAAG HPSH_03560 683458 - 682178 - | hypothetical protein gatB 684882 - 683458 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 635 684057 - 684042 - G 72 -3.2 -5.1356 | opp_overlap 684042, overlap 684044 TTTCATCAATAAAAA CAGGAT ACAA ATCCGG ATCTTTAAAATAGCG HPSH_03570 686180 - 684882 - | processing protease HPSH_03575 687244 - 686183 - | hypothetical protein HPSH_03580 689891 - 687246 - | protective surface antigen D15 HPSH_03585 691146 - 690064 - | hypothetical protein TERM 636 690739 - 690728 - G 76 -4.4 -5.03314 | TTGACGCTCAAAAAA TGCA CTTC TGCA GCGGTCATGGCCTTT TERM 637 691185 - 691206 + H 83 -6.7 -4.93318 | overlap 691198 AAAACAAACATTGTA GCATTTTTA GATT TAAGAATGC TTTTTATACATTATA HPSH_03590 691440 - 691943 + | nonheme iron-containing ferritin TERM 638 692399 - 692382 - g 70 -7.7 -3.63627 | TTTTCACACTCTAAA GGCGAAA TGCT TCTCGCC CTACAACGCTTGTTA HPSH_03595 691959 - 692582 + | phosphoserine phosphatase (serB) HPSH_03600 692629 - 692712 + | hypothetical protein TERM 639 692727 - 692716 - f 74 -5.8 -4.56597 | opp_overlap 692716 692715 CCCCCCCCCTAAAAA TCGC TGTG GCGA ATTGGTTTAACGGCC HPSH_03605 692721 - 693905 + | alpha-(1,3)-fucosyltransferase HPSH_03610 694492 - 693914 - | hypothetical protein aspA 695955 - 694549 - | aspartate ammonia-lyase TERM 640 695995 - 696012 + r 74 -2.1 -5.45802 | gap 1 ATATTCTAGCTATTG TAAC-CAA ATA TTGAGTTA TTTTTCTTTTAAGCG HPSH_03620 697278 - 696010 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase HPSH_03625 697688 - 697281 - | hypothetical protein HPSH_03630 698521 - 697700 - | UDP-glucose pyrophosphorylase (galU) HPSH_03635 700200 - 698518 - | soluble lytic murein transglycosylase TERM 641 699314 - 699335 + g 91 -2.4 -6.20267 | gap 1 AGGTTTAAGGCAGGG CTTTGTGAA AGGCG TTC-CAAAG TTTTTTTCTTTTTAG TERM 642 699410 - 699447 + g 70 -2.8 -5.00884 | gap 1, opp_overlap 699409 699408, overlap 699418 TCGTCCTTGATAACC GCTTCTGA-GCGTTCAA AATAC TTGAGCGCTTTAGAGGG TTTTTTGCGCAAGAT TERM 643 699820 - 699834 + g 70 -5.8 -4.39092 | overlap 699827 699827 AAGGGTTTGAAGGGG GATTTT ATC AAAATC TTTGATTTTTGATTT TERM 644 699827 - 699839 + g 79 -4.9 -5.0925 | overlap 699820 699827 TGAAGGGGGATTTTA TCAAA ATC TTTGA TTTTTGATTTTAAAG TERM 645 700104 - 700114 + g 80 -2.4 -5.65177 | opp_overlap 700104 AATAATCCCTAACGA TCCC AGC GGGC TTTTTTTCTAAATCT HPSH_03640 700502 - 700209 - | hypothetical protein HPSH_03645 701818 - 700499 - | glutamyl-tRNA synthetase TERM 646 701948 - 701927 - R 75 -10.1 -2.76322 | opp_overlap 701927 701929, overlap 701920 TTATTTAAGAGATTA GCGCTTGGC TAAC GCCAAGCTC TTTATGGTTGGCTAT TERM 647 701927 - 701948 + r 87 -10.1 -4.07306 | opp_overlap 701920 701927, overlap 701929 TTATTTAAGAGATTA GCGCTTGGC TAAC GCCAAGCTC TTTATGGTTGGCTAT TERM 648 701929 - 701946 + r 90 -11.3 -3.62572 | opp_overlap 701920 701927, overlap 701927 ATTTAAGAGATTAGC GCTTGGC TAAC GCCAAGC TCTTTATGGTTGGCT HPSH_03660 702843 - 702712 - | hypothetical protein HPSH_03665 704068 - 702902 - | poly(A) polymerase HPSH_03670 704130 - 704810 + | ExsB trans-regulatory protein TERM 649 704840 - 704861 + T 73 -4.6 -4.88293 | opp_overlap 704840 AAACCAACTAAAGAG CATTAAAA GGCATG TTTTAATG TTTGTTTTTAAAGTT HPSH_03675 705155 - 704856 - | outer membrane protein HopH HPSH_03680 705979 - 706431 + | hypothetical protein TERM 650 706663 - 706653 - g 71 -4 -4.98758 | AAAAAGCGATAAAAA GTTT TAC AAAC TCCATAAAAACCATG TERM 651 706810 - 706800 - g 71 -4 -4.98758 | AAAAAGCGATAAAAA GTTT TAC AAAC AACTCGCTAAAAACA HPSH_03685 706546 - 706959 + | hypothetical protein HPSH_03690 708502 - 706964 - | hypothetical protein TERM 652 707521 - 707532 + g 73 -5.8 -4.56775 | opp_overlap 707521 TGAAATCAAAACTGA CGCT TAAA AGCG TTTTTAAAGAACCAT TERM 653 708022 - 708010 - G 70 -5.5 -4.42062 | GATTTTTTAAAGAAA GGGAT AAT ACCCC CCTAGAAGTGTGAAT HPSH_03695 709040 - 708504 - | Hydrogenase expression/formation protein HPSH_03700 709711 - 709037 - | quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit (hydC) HPSH_03705 711460 - 709724 - | quinone-reactive Ni/Fe hydrogenase HydB TERM 654 709810 - 709782 - G 75 -8.2 -4.07885 | GACTGCCCTTTAAAA TCCATCACATGC ACCGA GCATGCGATGCA TGGATCAAAAGAATG TERM 655 710179 - 710194 + g 72 -9 -3.2964 | CAGCCGTGCGCCCAA GCGTTG AAAA CAACGC TTCTAAAGGCAGTTT HPSH_03710 712631 - 711477 - | Hydrogenase, small subunit TERM 656 711589 - 711601 + g 73 -6.9 -4.25283 | TTATCAGCCCCTAAG CCGTC AAA GGCGG TTTTAATGGAACGAT HPSH_03715 712766 - 713350 + | modulator of drug activity TERM 657 713374 - 713362 - T 78 -7.7 -4.19746 | opp_overlap 713371 713372 GTGATTTTAAAATAA GGGTT TTT AACCC CCCATTTCTTTGGGG TERM 658 713371 - 713392 + T 75 -7.2 -4.20367 | opp_overlap 713362, overlap 713372 AAATAAGGGTTTTTA ACCCCCCA TTTCTT TGGGGGGC TTGTTTATTCCACAA TERM 659 713372 - 713391 + T 83 -10.7 -3.11738 | opp_overlap 713362, overlap 713371 AATAAGGGTTTTTAA CCCCCCA TTTCTT TGGGGGG CTTGTTTATTCCACA HPSH_03720 715442 - 713397 - | hypothetical protein TERM 660 714045 - 714083 + g 71 -6.1 -4.19577 | ACGCCATTCTTGTGT GGGGGTTTGGGGGTAGA AATGC TCTACTTCTAAATTCTC TTCTTTTGGCGGTTC TERM 661 715540 - 715528 - R 71 -3.3 -5.03747 | AAACTTTTGAAAAAA CCGCA ATT TGTGG CTGAATTTATTAAAA HPSH_03725 716625 - 715567 - | cysteine-rich protein F HPSH_03730 717842 - 716637 - | tetrahydrodipicolinate N-succinyltransferase (dapD) ispG 718924 - 717845 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase HPSH_03740 719044 - 720171 + | hypothetical protein TERM 662 720552 - 720540 - g 73 -5.5 -4.65895 | GGGCCCATGGAAAAA GCAGT ATC ACCGC CATGTTAAGCGCGAT TERM 663 720889 - 720875 - g 90 -3.6 -5.93809 | GTTTTAGAAAAAAAA GACATT CGC AATATC CAATACATTTTAAAA murC 720164 - 721513 + | UDP-N-acetylmuramate--L-alanine ligase TERM 664 721686 - 721701 + G 73 -5.4 -4.56597 | opp_overlap 721686 AAACCAACGAGAAAT CGCTTT ACAA AGAGCG TTTTTAAGGGGGGAC HPSH_03750 721513 - 721878 + | hypothetical protein TERM 665 722565 - 722546 - g 70 -2.8 -5.03747 | overlap 722548 AAAGCGTGCAAAAAA TCGCGCAA AAAA TCGCACAA ATTGATAATGAAATA TERM 666 723331 - 723341 + G 73 -2.4 -5.26875 | ACCGCTTTGCGCTAT GGCG TGC CGCA TTTTTTGATTGAAAA TERM 667 724072 - 724059 - g 76 -4.5 -5.06103 | AGAATTTTTAAAAAA CCACC CTAA AGTGG TAAGCTTTAACGACG HPSH_03755 721885 - 724134 + | recombination and DNA strand exchange inhibitor protein TERM 668 724285 - 724296 + T 74 -5.8 -4.52803 | CCCTTAAAATCTTTA GCCT TGAT AGGC TTTTATCGCTTTCTC HPSH_03760 724803 - 724282 - | inorganic pyrophosphatase HPSH_03765 725614 - 724859 - | putative lipopolysaccharide biosynthesis protein HPSH_03770 726210 - 725560 - | putative lipopolysaccharide biosynthesis protein TERM 669 726222 - 726233 + r 83 -7.2 -4.68994 | opp_overlap 726222 TCATTCTTTTTTAAA CCCC TTTA GGGG TTTTTAAATGATCGT HPSH_03775 727215 - 726217 - | putative lipopolysaccharide biosynthesis protein adk 727815 - 727240 - | adenylate kinase TERM 670 727265 - 727283 + g 71 -6 -4.23045 | opp_overlap 727264 727265 AAAGACAAAATATAC TCTTGCAT TTC ATGCACGA TTTCTTCAATGCTTC TERM 671 727370 - 727343 - G 71 -5 -4.57569 | gap 1 TTATTCTTGTAAAAA TTTTGGATCTCAC CCA ACG-GATCCAAAA ACACCCGCATGCGGT aspS 729565 - 727832 - | aspartyl-tRNA synthetase TERM 672 728239 - 728252 + g 71 -5.2 -4.5366 | TAAAAGGGTGGTGTG CGGC ATGATA GCCG TTTTCGGTTTTTTCA TERM 673 729109 - 729098 - G 81 -7.2 -4.62471 | TTCAATCTCTAAAAA GCCC TTTT GGGC TAAAGCGTTACGAGC TERM 674 729479 - 729466 - G 80 -4.5 -5.24551 | opp_overlap 729466, overlap 729460 TTAAATCAATAAAAA CCACG CCTC CATGG TCTCTATAAGTGTTA HPSH_03790 730541 - 729600 - | chemotaxis protein TERM 675 730821 - 730802 - g 73 -5.6 -4.65895 | opp_overlap 730802 730803, overlap 730803 TCCCCTACCCAAAAA GTGGGGGC TACT ACCCCCAA TTCGTTCAATAAAAA TERM 676 730820 - 730803 - g 72 -9.1 -3.39216 | opp_overlap 730803 730802, overlap 730802 CCCCTACCCAAAAAG TGGGGGC TACT ACCCCCA ATTCGTTCAATAAAA TERM 677 730853 - 730837 - g 70 -2.9 -5.06414 | overlap 730838 TTCGTTCAATAAAAA CCCCCAT TTA ATGCGGA TGTGGAGCTTAGATG TERM 678 731714 - 731698 - g 71 -3.8 -4.83715 | AATTGAAAAAAAGAA TATCAT GCTCA ATGATA GGGTTGTGGTCATTA TERM 679 731823 - 731852 + G 70 -2.9 -5.01845 | overlap 731825 CCAAAGTTTGCCCTA TATGTTCGCATGA GCTT TTATGCGAAGAGA TTTTTACTTATTGTC ligA 730619 - 732589 + | NAD-dependent DNA ligase LigA TERM 680 732679 - 732667 - f 72 -4.9 -4.6902 | GTAGAATGCGAAAAA TAAAG ATA CTTTA AGGAGCAATAATGGA HPSH_03800 732690 - 733022 + | hypothetical protein HPSH_03805 733594 - 734052 + | putative abc transporter, ATP-binding protein HPSH_03810 734052 - 734801 + | hypothetical protein TERM 681 734854 - 734843 - T 80 -7.2 -4.59853 | TTAATGGCTCAAAAA GGGG TAAG CCCC CACCTTTTAAAACGC HPSH_03815 744430 - 734861 - | putative vacuolating cytotoxin (VacA)-like protein TERM 682 736777 - 736764 - G 73 -6.7 -4.15222 | opp_overlap 736740 736763 736759 ATTGTTCCTAAGAAA GCGAA ATTA TTCGC ATTCACTTCTAGCGT TERM 683 741608 - 741598 - G 76 -6.8 -4.4261 | opp_overlap 741604 GGTTGAACACTAAAA CGCT GTT AGCG CCGCTATAATCTTGC TERM 684 743446 - 743468 + g 73 -7.8 -3.88731 | overlap 743463 TATTAAAAGTGATAT TGCTTGCATT AAG AATGTAGGCA TTTCCTATAGTATTA TERM 685 743760 - 743748 - G 76 -6.9 -4.371 | opp_overlap 743749 743756 743757, overlap 743749 CCCATCACATTAAAA CCCCC ATT AGGGG TTTGGTTGCCAAAAT TERM 686 743749 - 743760 + g 71 -7.2 -3.90291 | opp_overlap 743748 743749, overlap 743756 743757 CCATCACATTAAAAC CCCC ATTA GGGG TTTGGTTGCCAAAAT HPSH_03820 745138 - 744569 - | hypothetical protein HPSH_03825 748221 - 745135 - | cytoplasmic pump protein of the hefABC efflux system HefC TERM 687 745727 - 745738 + g 72 -4.4 -4.77157 | GCCCCTTCAACCAGC CACT CTTT AGTG TTTTTGCTCACTTGC TERM 688 747124 - 747106 - G 78 -7.4 -4.41494 | CATGTTTAATGAAAA GCCCATCC ATT GAATGAGC GCAAAAGTCCCCATG TERM 689 748183 - 748162 - G 70 -2.9 -5.04385 | overlap 748167 CATAGTCCCAAAAAA GACAATCGC CAAA GCGAACATC AAGGTCGTAATAGGA HPSH_03830 748938 - 748234 - | membrane fusion protein of the hefABC efflux system HefB HPSH_03835 750381 - 748948 - | outer-membrane protein of the hefABC efflux system HefA TERM 690 750037 - 750022 - G 88 -9 -4.59511 | opp_overlap 750021 750019 750016 750024 750032 AAGAGTGGGCAAAAA CATCGC TTTT GCGATG GTATGGTTTTTCATC TERM 691 750131 - 750143 + g 75 -2.6 -5.2112 | opp_overlap 750123 750119, overlap 750123 750119 750117 TCATAAAGCCCCAAA GCGG CTTTA TCGC TTTTTTCATGGTATT hemE 751411 - 750392 - | uroporphyrinogen decarboxylase TERM 692 751014 - 751031 + g 79 -8.5 -4.12942 | opp_overlap 751014 751013 CAAAAACCGATTAAC GCTTTCT CTTT AGAAAGC TTTTGGCGCGTTTGA HPSH_03845 752046 - 751477 - | hypothetical protein TERM 693 751601 - 751589 - G 93 -5.5 -5.54907 | opp_overlap 751589 TGGATAAAATAAAAA GGGAT ACC ACCCC TTGCTTCTATGCTCA HPSH_03850 752747 - 752091 - | endonuclease III TERM 694 752497 - 752484 - G 70 -5.9 -4.36914 | overlap 752485 TTTTTGGTTATAAAA CCCGC TAGG GCGGA CACACTCTGCAAGCT TERM 695 752840 - 752820 - R 100 -11.9 -4.40221 | AAATTAAAGCGAAAA GCCAACGCT TAA AGCGTTAGC CCCATACAAACACCT HPSH_03855 754397 - 752865 - | flagellin A TERM 696 753704 - 753726 + g 88 -7.8 -5.14163 | opp_overlap 753704 753703, overlap 753698 TAACATTCGCATAAG CTCTAACC CCTGTTT GGTTAGAG TTTTTGTTAATCACT TERM 697 754446 - 754423 - H 76 -3.8 -5.24129 | overlap 754424 CCTTGTTATAAAAAA CCCAAAGGCA TCCT TGCTTTTGGT TGGAACTATTATCGG TERM 698 754445 - 754424 - H 70 -7.3 -3.73995 | overlap 754423 CTTGTTATAAAAAAC CCAAAGGCA TCCT TGCTTTTGG TTGGAACTATTATCG HPSH_03860 754561 - 755325 + | putative secretion/efflux abc transporter, ATP-binding protein HPSH_03865 755395 - 756342 + | multidrug resistance protein (spaB) HPSH_03870 756414 - 757715 + | methyl-accepting chemotaxis protein (MCP) TERM 699 757872 - 757858 - g 70 -2.8 -5.03314 | overlap 757860 TTGAGCGTTAAAAAA GATTTG CTT CAAAAC GCTTTTAACAAGCTC TERM 700 758475 - 758491 + G 72 -8.7 -3.53343 | opp_overlap 758475 AGAGTTTTTAACCAA TCGCGCT AAA AGCGTGA TTTACACCACCGCTT HPSH_03875 757738 - 758859 + | 8-amino-7-oxononanoate synthase (bioF) TERM 701 759192 - 759182 - g 81 -6.8 -4.77036 | opp_overlap 759181, overlap 759191 CGCTATGATTAAAAA CGCT AAA AGCG GTCGTTACACCGAGG TERM 702 759466 - 759478 + G 70 -3.3 -4.84359 | TGTTAGTCGCCTTGC CTAGG GCT CCGAG TTTTTATGACCCTAC TERM 703 759934 - 759919 - g 83 -3.2 -5.67063 | TTGATTATAAAAAAA GCGC TTTCAATC GCGC CACGCAAGCCAAACG HPSH_03880 758859 - 760838 + | penicillin-binding protein 1A (PBP-1A) HPSH_03885 761419 - 760841 - | tumor necrosis factor alpha-inducing protein TERM 704 761185 - 761202 + g 78 -2.7 -5.46276 | gap 1, overlap 761170 GCGCCACTCTCATTG TCGCT-CT TTT GGTAGCGA TTTTTTCTATCTCTT HPSH_03890 761578 - 761697 + | hypothetical protein HPSH_03895 763367 - 761895 - | DsbB-like protein TERM 705 763351 - 763340 - G 75 -3 -5.26875 | TCGCCAAGGAAAAAA GATT ATAA AATC GGGTTTCTTTATTCA HPSH_03900 763540 - 763376 - | hypothetical protein HPSH_03905 765458 - 763680 - | hypothetical protein TERM 706 765551 - 765568 + r 76 -4.1 -5.03145 | opp_overlap 765551 765554 GCTAAAGGAATGAGA TAAGGAG TTAC CCCCTTA TTTTTTCAAAGCTTC oorC 766120 - 765566 - | 2-oxoglutarate-acceptor oxidoreductase subunit OorC oorB 766941 - 766120 - | 2-oxoglutarate-acceptor oxidoreductase subunit OorB TERM 707 766372 - 766395 + g 74 -3.9 -5.1286 | GAAGCTAAAGCCCTT GTGCGTAAA ACCTTC TTTAAGCAC TTTTTCTAATTTTTG oorA 768070 - 766943 - | 2-oxoglutarate-acceptor oxidoreductase subunit OorA TERM 708 767454 - 767464 + g 76 -3.2 -5.24129 | TGCGCGACCCCATAA GGCT TGT AGTC TTTTTTATCGCCCAC TERM 709 767677 - 767690 + g 70 -8.1 -3.6543 | opp_overlap 767677 767676 CGACGGCTTTAAAAT CCCCA TGTA TGGGG TGTTTTAAGAAATTC oorD 768411 - 768070 - | 2-oxoglutarate-acceptor oxidoreductase subunit OorD HPSH_03930 768491 - 768399 - | hypothetical protein HPSH_03935 769519 - 768587 - | aminodeoxychorismate lyase (pabC) TERM 710 770206 - 770187 - gH 79 -8 -4.05905 | opp_overlap 770186 AAAAATTTAAAAACA TGGATTTT TGAT AAAATCCA ATTCGCTAGCTTTAA TERM 711 771779 - 771764 - gH 70 -3.2 -4.98255 | TGGCAATTATAAAAA CGGCAT GATC ATGGCG GATTTAGTGCATGGG HPSH_03940 769500 - 772433 + | hypothetical protein TERM 712 772541 - 772555 + G 70 -5.6 -4.36127 | opp_overlap 772541 772540, overlap 772549 TTGGTATCCATGAAG GGGTTC AAT GCACCC TTTTGCATTATTCCA HPSH_03945 772435 - 772665 + | hypothetical protein HPSH_03950 772662 - 773318 + | endonuclease III (nth) HPSH_03955 773400 - 773771 + | flagellar motor switch protein HPSH_03960 773783 - 774649 + | hypothetical protein TERM 713 774879 - 774869 - g 72 -4.6 -4.74132 | AGATCCCAGTAAAAA CACC CAA GGCG CTCCTAAACCCACGC TERM 714 775235 - 775218 - g 84 -7.7 -4.76233 | CAAGAAAATAATAAA GGCTTGG ATAA CCAAACC AGGAGGGATATTGAT HPSH_03965 774633 - 775580 + | hypothetical protein HPSH_03970 775584 - 776603 + | dihydroorotase HPSH_03975 776579 - 777697 + | hypothetical protein HPSH_03980 777704 - 778258 + | hypothetical protein TERM 715 778295 - 778307 + G 75 -2.7 -5.29846 | overlap 778296 778301 ATGCCCTTTTTTCGC TCTTT TTA AAAGG TTTTTATTTCACCTT TERM 716 778945 - 778960 + G 70 -5.4 -4.45168 | gap 1, opp_overlap 778938 778937, overlap 778937 778945 ATGAAAATCACCCCC GG-TGCG TTT CGCAACC TTTATCTTTTGGCAC TERM 717 780147 - 780135 - g 72 -9.1 -3.3197 | opp_overlap 780130 780129 780127, overlap 780121 AGATTATTTTTATAA CCCCA GTT TGGGG TTAAGGTATTTGAAT HPSH_03985 778264 - 780291 + | hypothetical protein HPSH_03990 780368 - 781240 + | methylene-tetrahydrofolate dehydrogenase HPSH_03995 781241 - 782113 + | signal peptidase I (lepB) HPSH_04000 782122 - 782820 + | hypothetical protein HPSH_04005 782841 - 783296 + | ribose-5-phosphate isomerase B HPSH_04010 783349 - 783681 + | hypothetical protein TERM 718 784008 - 783996 - g 70 -3.3 -4.8622 | GCCTGTAAGGAAAAA GGGCA AAC TCCCC GCGCACACCCTATCT HPSH_04015 783739 - 784278 + | adenine phosphoribosyltransferase HPSH_04020 784293 - 784871 + | hypothetical protein TERM 719 785614 - 785594 - g 76 -3.2 -5.31091 | TAGAAGAAAAGAAAA TGAACGCC TTTTT AGCGGTCA ATAAAGCCTCTCTTG HPSH_04025 784933 - 786423 + | leucyl aminopeptidase TERM 720 786945 - 786904 - g 72 -4.7 -4.69464 | gap 1, opp_overlap 786914, overlap 786896 786914 AAAAGACGCTAAAAA TCTTTTAGAATGCGCTTTGA GTT TAAAAACGCATT-TAGAAGA ATTAAAGCCGGCGAA TERM 721 787338 - 787325 - g 78 -3.7 -5.1861 | TGGACCATTAAAAAA GGCTC TAGT GCGCC TGTGGCTGCTGGGGT HPSH_04030 786425 - 787525 + | translation-associated GTPase TERM 722 788142 - 788121 - g 93 -6.7 -5.40072 | opp_overlap 788120 788121 GTTTGTTTAAAAAAA GTTTTTTGA ATAT CCAAAAAAC CTTTAAATGGCCGAA HPSH_04035 787559 - 788431 + | hypothetical protein HPSH_04040 789553 - 788507 - | membrane protein TERM 723 788779 - 788766 - G 73 -6.7 -4.26305 | opp_overlap 788765 AAAATGGAATACAAA GCGAT AAAA ATCGC CTCATTCACATTCCC dapF 789668 - 790489 + | diaminopimelate epimerase TERM 724 790651 - 790669 + G 71 -6 -4.15088 | TCCAGAATCTAGGCG GCTATTTG ATG CATATAGC TATTTTTATCATTTT HPSH_04050 790596 - 791243 + | hypothetical protein TERM 725 791277 - 791261 - T 89 -10.9 -3.5774 | AGCGAACGCCTTAAA GTAGGCT TAA AGCCTAC TAGAAGAATCATAAT HPSH_04055 791509 - 791267 - | hypothetical protein TERM 726 791869 - 791879 + G 70 -5.4 -4.37092 | GTTTGACTCCAAATT TTGG GAT CCAA TTTTATACAAAAGGT TERM 727 792313 - 792348 + G 71 -6.5 -4.18494 | TATTGGGTATTGGAG GGTATTTTGTCTT-GTT CCAT AACGAAGACAAA-TACC TTTTGAATGGGGCTG HPSH_04060 791682 - 792932 + | hypothetical protein rpsU 793034 - 793246 + | 30S ribosomal protein S21 fabG 793283 - 794026 + | 3-ketoacyl-(acyl-carrier-protein) reductase HPSH_04075 794256 - 794492 + | acyl carrier protein TERM 728 794716 - 794731 + G 71 -7.6 -3.90112 | AAGCCTTTCGTGTTA GCATTC AATG GAATGC TTTAGTTAGGAAGCC TERM 729 794765 - 794744 - g 75 -10.1 -3.18264 | opp_overlap 794743 794742 TGCTTTAGTTAGGAA GCCCCTTGC TTTA GAAAGGGGC GGTTTCACTGAATTA HPSH_04080 794682 - 794789 + | hypothetical protein HPSH_04085 794805 - 796043 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 730 796694 - 796705 + G 72 -4.4 -4.69622 | ACAAATTGGCTATGA TGGA ATAT TCCA TTTTTAGCGTTATAT HPSH_04090 796066 - 797004 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha HPSH_04095 797117 - 797206 + | hypothetical protein HPSH_04100 797255 - 797193 - | hypothetical protein HPSH_04105 797415 - 797612 + | hypothetical protein HPSH_04110 798520 - 797699 - | hypothetical protein HPSH_04115 799491 - 798517 - | hypothetical protein TERM 731 798698 - 798724 + g 90 -3.2 -6.00086 | opp_overlap 798698 798711, overlap 798698 798699 798717 GTCTCTAAAGAATAA TTTTTTTTAAAA ACT TTTTGAAAAGAG TTTTTTTTCTCATCT TERM 732 799048 - 799032 - G 74 -5.1 -4.67038 | opp_overlap 799039 799040 CCCCTAAAACCAAAA CAAAGGG TTT CCATTTG GAAGATTTTTTGGAC HPSH_04120 800187 - 799504 - | hypothetical protein TERM 733 800063 - 800086 + g 74 -4 -5.1634 | ATGATATTAGGGCAT GCTTTTTT GAGCGCGA AAAAAAGC TTTTTGTCTATTTCT HPSH_04125 801063 - 800200 - | hypothetical protein rpmE 801291 - 801088 - | 50S ribosomal protein L31 rho 801553 - 802869 + | transcription termination factor Rho TERM 734 802898 - 802872 - f 74 -3.2 -5.34655 | overlap 802874 GAATGAAAAATAAAA TCCCTAATTAAT CCC ATTAATTAAAAA AGTGTCATGAAAATA HPSH_04140 802905 - 803672 + | glutamate racemase TERM 735 804077 - 804056 - T 73 -8.7 -3.18264 | opp_overlap 804055 804057, overlap 804057 TGTTTTAGTTAGGAA TCCCCTTTC TTTA GAAAGGGGT GGTTTTTGCGTTTTT TERM 736 804057 - 804076 + T 89 -12.2 -3.31103 | opp_overlap 804056 804057, overlap 804055 GTTTTAGTTAGGAAT CCCCTTTC TTTA GAAAGGGG TGGTTTTTGCGTTTT TERM 737 804076 - 804057 - T 84 -12.2 -2.50816 | opp_overlap 804057 804055, overlap 804056 GTTTTAGTTAGGAAT CCCCTTTC TTTA GAAAGGGG TGGTTTTTGCGTTTT HPSH_04145 807594 - 804109 - | cag pathogenicity island protein (cagA, cag26) TERM 738 804360 - 804376 + g 81 -2.9 -5.53288 | overlap 804361 TCTTATCATTCACGA GCTTGAG CCA CTCAGGG TTTTTTTGCGTTAGC TERM 739 804870 - 804890 + g 93 -7.5 -5.42605 | TGTAAATGGACTCTT CAGGGCTAG CTA CTTGTCCTG TTTTCTTTTTATTAA TERM 740 805107 - 805117 + g 85 -4 -5.54894 | AATTTTTTCCAACAT TGAA ATT TTCA TTTTTTTGATCCGTT TERM 741 807424 - 807447 + g 74 -5.3 -4.72986 | AGCTTGCCTGTTATC CCTATCGTT CTTATC AACGATTGG TTTTTGATCGGGATC TERM 742 807829 - 807802 - H 85 -6.5 -5.2204 | overlap 807792 CACAATTAACAAAAA CTTGCTAAAAT AGACAA ATTTTAACAAG AAAAGAAATAGGAAA HPSH_04150 808001 - 808228 + | cag pathogenicity island protein (cagB) HPSH_04155 808395 - 808742 + | cag pathogenicity island protein (cagC, cag25) TERM 743 808801 - 808771 - g 81 -2.8 -5.54885 | gap 1, opp_overlap 808775, overlap 808772 AATAGTAATAAAAAA CTAAGAG-ACTTT TTTTTG AAAGTTCTCTTAA GTCTCGTTGTTTTCA TERM 744 808891 - 808881 - g 100 -5.4 -6.23317 | opp_overlap 808881 AGAAAAAGAAAAAAA CACT CCT AGTG GGCGTGTTTATACGA HPSH_04160 808744 - 809367 + | cag pathogenicity island protein (cagD, cag24) TERM 745 809539 - 809551 + G 83 -6.3 -5.12172 | GGAATAGGTTGTTTG GTTTC CCT GAAAC TTTTATTTATTCCTC TERM 746 811882 - 811903 + G 78 -7.3 -4.37092 | opp_overlap 811896 AAGCTTGGAAATATT TAGGCGATC CAAA GGTCGCTTA TTTTGTAAGAGACAT TERM 747 812158 - 812173 + G 88 -9 -4.54727 | AACAAGATGGAAGCC CTAGCG TTAT CGCTAG TTTTAATTTGAGAGG HPSH_04165 809382 - 812327 + | cag pathogenicity island protein (cagE, cag23) HPSH_04170 812329 - 813135 + | cag pathogenicity island protein (cagF, cag22) HPSH_04175 813190 - 813621 + | cag pathogenicity island protein (cagG, cag21) HPSH_04180 813804 - 813607 - | hypothetical protein TERM 748 814243 - 814276 + GH 89 -6.7 -5.28481 | CCTTGATAGCTGTAC CGCTTTGGGTGCGCT TGCT AGCTCATCAAAAGTG TTTTTTAGTTGCATG HPSH_04185 813803 - 814735 + | cag pathogenicity island protein (cagH, cag20) TERM 749 815471 - 815488 + G 88 -4.1 -5.75945 | GTTTCAAAGCACCAT CTACGAG CCTG CTCTTAG TTTTTTTTCAAGCAT HPSH_04190 814746 - 815885 + | cag pathogenicity island protein (cagI, cag19) HPSH_04195 815882 - 816595 + | cag pathogenicity island protein (cagL, cag18) HPSH_04200 817598 - 816678 - | cag pathogenicity island protein (cagN, cag17) HPSH_04205 818743 - 817613 - | cag pathogenicity island protein (cagM, cag16) TERM 750 817838 - 817852 + g 74 -4.3 -4.90266 | opp_overlap 817820 817849, overlap 817849 ACACAATTTTTGTTT TTGAG CGAAA CTCAA TTTTTGATTGGTAAA HPSH_04210 819169 - 819513 + | cag pathogenicity island protein (cagP, cag15) TERM 751 819880 - 819859 - T 73 -8.7 -3.18264 | opp_overlap 819858 819860, overlap 819860 TGTTTTAGTTAGGAA TCCCCTTTC TTTA GAAAGGGGT GGTTTTTGCGTTTTT TERM 752 819860 - 819879 + T 89 -12.2 -3.31103 | opp_overlap 819860 819859, overlap 819858 GTTTTAGTTAGGAAT CCCCTTTC TTTA GAAAGGGG TGGTTTTTGCGTTTT TERM 753 819879 - 819860 - T 84 -12.2 -2.50816 | opp_overlap 819858 819860, overlap 819859 GTTTTAGTTAGGAAT CCCCTTTC TTTA GAAAGGGG TGGTTTTTGCGTTTT HPSH_04215 823169 - 819912 - | cag pathogenicity island protein (cagA, cag26) TERM 754 822999 - 823022 + g 74 -5.3 -4.72986 | AGCTTGCCTGTTATC CCTATCGTT CTTATC AACGATTGG TTTTTGATCGGGATC HPSH_04220 823362 - 823460 + | hypothetical protein HPSH_04225 823481 - 823708 + | cag pathogenicity island protein (cagB) HPSH_04230 823876 - 824067 + | cag pathogenicity island protein (cagC, cag25) HPSH_04235 824137 - 824232 + | hypothetical protein TERM 755 824871 - 824883 + T 72 -4.8 -4.6635 | CACTAAAGTTTTACT TGGG GGACG CCCA TTTTATTAGCGGTTT HPSH_04240 825163 - 824858 - | cag pathogenicity island protein (cagQ, cag14) HPSH_04245 825374 - 825192 - | hypothetical protein HPSH_04250 825507 - 825644 + | hypothetical protein HPSH_04255 826078 - 826677 + | cag pathogenicity island protein (cagS, cag13) HPSH_04260 827721 - 826879 - | cag pathogenicity island protein (cagT, cag12) HPSH_04265 828384 - 827737 - | cag pathogenicity island protein (cagU, cag11) HPSH_04270 828660 - 829418 + | cag pathogenicity island protein (cagV, cag10) HPSH_04275 829423 - 831030 + | cag pathogenicity island protein (cagW, cag9) TERM 756 831915 - 831892 - g 77 -11 -2.89565 | opp_overlap 831890, overlap 831889 AACTCCATAGAATTA TCTCCTAGCG ATAG CGCTTGGAGA ACTAATCTTGTTGTG HPSH_04280 831082 - 832650 + | cag pathogenicity island protein (cagX, cag8) TERM 757 837065 - 837082 + G 72 -8.5 -3.56092 | opp_overlap 837061, overlap 837053 GGCGGCTAAAGGTTA TCCATTG TTGC CAATGGA TTTCAAAAATGGTGG HPSH_04285 832665 - 838229 + | cag pathogenicity island protein (cagY, cag7) HPSH_04290 838219 - 838353 + | hypothetical protein HPSH_04295 838366 - 838965 + | cag pathogenicity island protein (cagZ, cag6) TERM 758 839021 - 839006 - g 87 -4.8 -5.5208 | GCAGAAGATAAAAAA TTTCTA GAAG TAGAAA GAGCTTTAAAAGAAG TERM 759 839578 - 839568 - g 73 -5.4 -4.56978 | TCCCTAAAGAAGAAA GGAT CAT ATCC ATTGAAGACACCGAA HPSH_04300 838970 - 839962 + | cag pathogenicity island protein (caga) HPSH_04305 839971 - 842217 + | cag pathogenicity island protein (cagb, cag5) HPSH_04310 842716 - 842336 - | cag pathogenicity island protein (cagg, cag4) HPSH_04315 844300 - 842855 - | cag pathogenicity island protein (cagd, cag3) TERM 760 843294 - 843304 + g 75 -5.4 -4.76478 | TTCTTTTTCAACTCT GCTT CCA AAGC TTTTAGTTTCTTTTG HPSH_04320 844511 - 844314 - | cag pathogenicity island protein (cage, cag2) HPSH_04325 844874 - 844527 - | cag pathogenicity island protein (cagz, cag1) TERM 761 844789 - 844827 + g 93 -5.5 -5.68438 | gap 1, opp_overlap 844814 TCATAACGCTTGTCA GCCAAATTGTTTTTGAAA AAAT TTACAAAAGCG-TTTGGC TTTTTTGTTTCATGG HPSH_04330 845087 - 845917 + | hypothetical protein TERM 762 845901 - 845917 + T 73 -3.7 -5.14965 | TTGGCTATGAAAAAG CTATGGA AGC TCTGTAG TTTTTTAATCAAGCT HPSH_04335 846984 - 845992 - | conserved hypothetical secreted protein era 847886 - 846981 - | GTP-binding protein Era hslU 849217 - 847886 - | ATP-dependent protease ATP-binding subunit TERM 763 848563 - 848577 + g 93 -5.8 -5.59564 | overlap 848573 GGGCTTCTTTAGCCT CTTTAA CGC TTAAAG TTTTTTTGACTTTAT HPSH_04350 849759 - 849217 - | ATP-dependent protease peptidase subunit rplI 850212 - 849763 - | 50S ribosomal protein L9 HPSH_04360 852344 - 850275 - | hypothetical protein TERM 764 850339 - 850349 + g 72 -3.2 -5.01553 | AACCCCAAACAATAA GGGA TAT TCTC TTTTGTTTCTAGCTT TERM 765 850697 - 850716 + g 77 -9.4 -3.53444 | GCGTTTCTGCATCTA GATTTGGA TAAG TCCAAATC TTTAAAGCCAAATCC HPSH_04365 852479 - 853924 + | glutamine synthetase TERM 766 853990 - 853959 - T 82 -7.4 -4.56775 | opp_overlap 853966 853969, overlap 853963 ATCCCCTTTTAAAAA TTTAGAATAAGGCA AAAA TGCCTTGTTCTTAA AAATGGGGTTGAAAA TERM 767 854223 - 854213 - T 71 -5.4 -4.55295 | TTCTCTATAAACAAA CGTT TTT AACG CAAGTGTAGTCGCCG HPSH_04370 854282 - 854202 - | hypothetical protein TERM 768 854474 - 854485 + r 71 -3 -5.18643 | opp_overlap 854468 CAATAAAACCCTAAC TGAA ATTG TTCA TTTTATTTTAGTTAG TERM 769 854562 - 854539 - R 70 -8.2 -3.16564 | GTCTTAGTGTACCAA CCTTGTGTTA CTGA TCACACAAGG CAAGATTAATCCTTA HPSH_04375 855380 - 854616 - | dihydrodipicolinate reductase TERM 770 854910 - 854924 + g 81 -5.6 -5.11033 | overlap 854912 CAAACTCAACGCAGT GCCGCT CGG AGCGTC TTTTTTGAGGTTGTG TERM 771 854912 - 854922 + g 73 -6.8 -4.17355 | overlap 854910 AACTCAACGCAGTGC CGCT CGG AGCG TCTTTTTTGAGGTTG HPSH_04380 856782 - 855403 - | putative Glycolate oxidase TERM 772 856170 - 856154 - G 70 -8.1 -3.66666 | overlap 856146 GCTAAAAGCTTTAAA GTGATTT CAG AAATCAC GCCCAAGCACCCCTC HPSH_04385 858091 - 856784 - | plasminogen binding protein TERM 773 857134 - 857157 + g 88 -3.8 -5.73563 | CTCTTTCTTCAAATT CCATAGCC TTTTTGGT GGCTTTGG TTTTTTTCCTTTCAT HPSH_04390 858740 - 858102 - | hypothetical protein HPSH_04395 859948 - 858740 - | putative outer membrane protein TERM 774 858811 - 858826 + g 75 -5.4 -4.82901 | overlap 858823 GTTCTTCTAATTTTT GCTTAG AATG CTGAGC TTTTTCTAAAAAAAC TERM 775 859420 - 859430 + g 81 -5.4 -5.14965 | opp_overlap 859414 TTGTATAAACGATAG CGAT TTT ATCG TTTTTTGCTAGGCGT TERM 776 860239 - 860221 - H 72 -4.7 -4.7416 | opp_overlap 860204 860234 860235 TTAAAAGTCCAAAAA TTTTAAG CGTTT CTTAAAA AATGCTTTTTAGTAT TERM 777 860478 - 860492 + G 70 -2.8 -5.14819 | AAAAGGGTTTGTTGG GTTTTC TTG GACAAC TTTGTTTTTTGGTTT HPSH_04400 860422 - 860805 + | hypothetical protein HPSH_04405 860893 - 860819 - | hypothetical protein gyrB 863221 - 860900 - | DNA gyrase subunit B TERM 778 861900 - 861880 - G 85 -9.1 -4.2349 | opp_overlap 861880 TTTCCACATTTAAAA TCTTACCTT TTA AAGGCAAGA TCGCTTGGAAAACCC HPSH_04415 864357 - 863233 - | DNA polymerase III subunit beta HPSH_04420 865482 - 864415 - | phospholipase A1 TERM 779 864778 - 864760 - G 86 -10.2 -4.12738 | CCACACCAAACGAAA CACAGGGC GTT GCCCCGCG CTCACCGAACGACAC TERM 780 864842 - 864873 + g 73 -6.6 -4.20367 | opp_overlap 864837, overlap 864835 864847 TCTTTAACGATTACA GGTTGTCCTGGAAA CTGG TTTTCAGGATTGCC TTCTTTATTAAAAGG HPSH_04425 866825 - 865497 - | sodium- and chloride-dependent transporter TERM 781 865566 - 865578 + g 77 -7.7 -4.1891 | AACGCTAAAATGCCA CGCTT TAA AAGCG TTTGTATTAAAGAAA TERM 782 866755 - 866715 - G 71 -6.2 -4.24984 | gap 1, overlap 866716 ATATAAAAGCACAAA CGCACTCCCCCCATTATGG CCTA CCATA-TAAGGGAAGCGCC AGATATGCCCTAAAC TERM 783 866754 - 866716 - G 73 -9.7 -3.13364 | gap 1, overlap 866715 TATAAAAGCACAAAC GCACTCCCCCCATTATGG CCTA CCATA-TAAGGGAAGCGC CAGATATGCCCTAAA HPSH_04430 868164 - 866836 - | sodium- and chloride-dependent transporter TERM 784 867523 - 867513 - G 85 -5.4 -5.34857 | TTAAAGAAAAGAAAA CTTG CCC CAAG GAATAAGTGAACACT TERM 785 868539 - 868557 + G 85 -7.4 -5.00616 | AAGGCGTGTTTGTTA TCCGCTCT ATC AAAGCGGA TTTTTTCACCCCCGC HPSH_04435 868394 - 868795 + | hypothetical protein HPSH_04440 868785 - 869045 + | hypothetical protein murD 870310 - 869042 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 786 869301 - 869317 + g 77 -8.7 -3.83026 | opp_overlap 869301 869300 AATTCTTCAAAAAGG GGGGTTA AAT TGACCCC TTTAATATCGCCCCC TERM 787 869603 - 869582 - G 70 -3 -5.06816 | gap 1, opp_overlap 869568, overlap 869558 869557 869584 AGCGTCTAATAAAAA CGCTCCCTT AAACA AAAGG-GCG TTAGAAGGGATTTTT mraY 871373 - 870312 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 788 870429 - 870446 + g 81 -5.5 -5.08011 | ATGATGGTGGATAGG CGCCATT AAAA AAAGGCG TTTTTTACGGGTTTT TERM 789 871219 - 871230 + g 75 -5.8 -4.66833 | opp_overlap 871218 ACGAAGCTAGAAATG GGCT GGTT AGCC TTTTTAGCCTTGGCC HPSH_04455 871498 - 872340 + | hypothetical protein rpmB 872440 - 872628 + | 50S ribosomal protein L28 TERM 790 873089 - 873099 + G 70 -5.4 -4.42238 | AGGAATTATTGCTTT TAGC GTG GCTA TTTTAGTTAGCGTGG HPSH_04465 872778 - 873914 + | putative potassium channel protein HPSH_04470 874311 - 873916 - | hypothetical protein HPSH_04475 874701 - 874327 - | hypothetical protein TERM 791 874788 - 874805 + H 87 -2.1 -5.96219 | CTTTGTATTCTACCA TAAATTT TTAA AAATTTG TTTTTTTTGTAAATC TERM 792 874867 - 874897 + H 76 -2.8 -5.54403 | opp_overlap 874869, overlap 874869 TAGGGGAGAGAGAGA AATATATATAATTA CAA TTATTATATATATC TTTTTATTCTTTTTT TERM 793 875513 - 875489 - g 71 -7.3 -3.81137 | opp_overlap 875491 875496, overlap 875496 GCCTAAACATCTAAA TTCAAAAGATT TAA AATCTTTTGTA TATACTCTTATAAAC TERM 794 875491 - 875511 + G 72 -9.9 -3.02381 | opp_overlap 875489 875496, overlap 875496 CTAAACATCTAAATT CAAAAGATT TAA AATCTTTTG TATATACTCTTATAA HPSH_04480 874998 - 876074 + | integrase/recombinase (xerD) HPSH_04485 877341 - 876139 - | hypothetical protein TERM 795 876199 - 876211 + g 70 -3.3 -4.94672 | TCTTATGTTTTCAGG CTGAG AGG CTCTG TTTTTAATGTTATTT TERM 796 876823 - 876812 - G 74 -4.4 -4.84017 | opp_overlap 876812, overlap 876799 AAGCTTTCATAAAAA GCAA AAAG TTGC TTGGTTTGATTTTTT TERM 797 876918 - 876932 + g 89 -5.8 -5.44198 | TTGATTGTTGTTGAG CTTTTT TGT AAAAAG TTTTTGTTGTTTCTT HPSH_04490 878726 - 877341 - | hypothetical protein TERM 798 878239 - 878252 + g 73 -2.4 -5.29885 | overlap 878221 TCTTTTCCCTTATCG GAGA AAAAAA TCTC TTTTGTTTTTGGGTT HPSH_04495 880871 - 878730 - | hypothetical protein TERM 799 880123 - 880099 - G 85 -9.3 -4.30576 | overlap 880103 TCTCCATTACCAAAA GGAATAGGGAA AAG CCCCCCATTCC CTAACCCCCCACCAC HPSH_04500 882183 - 880915 - | hypothetical protein TERM 800 881271 - 881287 + g 70 -5.9 -4.46581 | CTCTTTTATCCACTT CGTTATT GGC AATAGCG TTTTGTAAGATTTTA HPSH_04505 883221 - 882184 - | hypothetical protein TERM 801 884119 - 884107 - g 87 -6.3 -5.19328 | ATCCTAGAACAAAAA TTGCT TTC AGCAA CAGATTATTATTCTT TERM 802 884948 - 884938 - g 70 -3.2 -4.84359 | GCAGTTTCAGAAAAA TCCC ATA GAGA GAGAGATAAACTACA TERM 803 885850 - 885830 - g 75 -10.5 -3.04263 | overlap 885816 885843 ACGCTATTTCTAATA GTGTAGGAT TAA ATCCCACAC AAGAGAGTGGAATAA TERM 804 888545 - 888527 - g 76 -4.6 -5.05153 | ACCCTAAAAAAGAAA TCTTTATC ACT GATGAAGA GCAAAGCAATCTCGC TERM 805 889907 - 889882 - g 78 -2.5 -5.52347 | overlap 889874 889895 889896 AAGAAAAGCAAAAAA GGGCAAGACAA TATC CTTTCTTGCAC CACAGACGCTAGAAA HPSH_04510 883375 - 891786 + | hypothetical protein HPSH_04515 892053 - 892709 + | PARA protein TERM 806 892828 - 892844 + G 77 -9.5 -3.57144 | AAAAAGACAGGTTGA GCGATTT AGA AAATCGC TTTGAAAATGCCAAC TERM 807 892990 - 892972 - g 76 -3.1 -5.23292 | opp_overlap 892972 TCAGAGAAAATAAAA GCGTGTT TGTTC AAGACGC TATTGTTTTTTATTT HPSH_04520 892794 - 893063 + | hypothetical protein TERM 808 893799 - 893782 - g 72 -3.3 -5.04325 | opp_overlap 893782 893784 GCTAAATTAGAAAAA GCCGCTC TTAT GAATGGC GTTTATATAAGCCCT TERM 809 894071 - 894052 - g 73 -7.8 -3.95674 | AAAAGCCTTAAAGAA GCTTGCGC CCAA GAGCAAGC CAAAGCCTATAACCA HPSH_04525 893095 - 894273 + | hypothetical protein HPSH_04530 896205 - 894298 - | hypothetical protein TERM 810 894832 - 894820 - G 70 -2.7 -5.03314 | overlap 894821 GCTATCTTTAAAAAA CTTAG CCA CTAAA AACATATTGCCTTTA HPSH_04535 896499 - 896813 + | hypothetical protein TERM 811 897051 - 897028 - g 78 -2.5 -5.40004 | overlap 897000 TATGAAATCAAAAAA CAAGAAAAC GAACTT GTTTTATTG CGTCTAGACACTCAT HPSH_04540 896806 - 897087 + | hypothetical protein HPSH_04545 899089 - 897362 - | conjugal transfer protein (traG) HPSH_04550 899647 - 899090 - | hypothetical protein TERM 812 899509 - 899522 + g 74 -3.9 -5.12617 | GGGGAAAATTATGCA GATTA AGAA TAATC TTTTTTAGATAGTTA HPSH_04555 899938 - 899648 - | hypothetical protein HPSH_04560 900390 - 899935 - | hypothetical protein HPSH_04565 901328 - 900387 - | VIRB11 TERM 813 900881 - 900864 - G 70 -5.6 -4.42287 | overlap 900860 CAAAGAATTAACAAA GCTAGT CTTGCC ACTAGC TGTGCCACCACTTAT HPSH_04570 901627 - 901328 - | hypothetical protein HPSH_04575 901887 - 901624 - | hypothetical protein HPSH_04580 902173 - 902009 - | hypothetical protein HPSH_04585 902256 - 902170 - | hypothetical protein HPSH_04590 903478 - 902243 - | ComB3 protein HPSH_04595 905016 - 903475 - | Component of conjugal plasmid transfer system TERM 814 903527 - 903544 + g 79 -3.4 -5.35721 | gap 1, overlap 903527 GCTTGATTTTGTTTT GGGG-TG TTATT CATCCCC TTTTTATTATTCTCT HPSH_04600 906002 - 905016 - | hypothetical protein HPSH_04605 906132 - 906004 - | hypothetical protein HPSH_04610 908066 - 906132 - | topoisomerase I HPSH_04615 910557 - 908059 - | DNA transfer protein TERM 815 908608 - 908596 - G 71 -4.9 -4.61482 | TGCTTCAAAAAACAA TTTGT GGA ACAAA TACATAGCAATTAGC TERM 816 909331 - 909303 - G 79 -9 -3.81755 | opp_overlap 909308, overlap 909308 ATTTTTCAAACATAA TCAAACTAGCAA TATTT TGGCTAGTTTGA GGTCTTAGGCGTGAA HPSH_04620 910830 - 910570 - | hypothetical protein HPSH_04625 911133 - 910831 - | hypothetical protein TERM 817 910925 - 910939 + g 75 -5.7 -4.67353 | TTCCACGCAATTTCT CCTAG CCTAT CTAGG TTTTTAACTACATAA HPSH_04630 911593 - 911123 - | hypothetical protein TERM 818 911286 - 911297 + g 78 -3 -5.42265 | overlap 911291 GATTGCTTCTCTATT CTTT CTAA AAAG TTTTTTATCATTTCA HPSH_04635 913038 - 911758 - | hypothetical protein TERM 819 912730 - 912757 + g 70 -3.4 -4.95484 | CTCTTTAAATTTATC TGCTTCTTTACT AGTT AGTTTAGAGGCA TTTTCTTTCATGGTG TERM 820 912835 - 912818 - G 71 -7.1 -3.87149 | opp_overlap 912818 CCCATTAAATCTAAA TTTCTGT TCTT ACAGAAA TTGATAATATTACCG HPSH_04640 913813 - 913049 - | hypothetical protein TERM 821 913563 - 913575 + g 80 -6.3 -4.67904 | opp_overlap 913562, overlap 913574 TAGTGTCTACTTAAT GCAAT TTT ATTGC TTTTTGAACTTAGTG HPSH_04645 915454 - 913835 - | hypothetical protein TERM 822 914256 - 914238 - G 84 -10.4 -3.90922 | opp_overlap 914237 914242, overlap 914242 ATGTTTTTTAAAGAA TAAACGCT ATC AGCGTTTA ACTTCGTTTCTAATT TERM 823 914252 - 914242 - G 79 -6.8 -4.56978 | opp_overlap 914242 914237, overlap 914238 TTTTTAAAGAATAAA CGCT ATC AGCG TTTAACTTCGTTTCT HPSH_04650 915459 - 915701 + | hypothetical protein ruvA 916277 - 915726 - | Holliday junction DNA helicase motor protein HPSH_04660 918146 - 916302 - | hypothetical protein TERM 824 916839 - 916811 - G 76 -4.5 -5.15117 | CAAAAGCGTAAAAAA TAAAGCGGTTGCC ATT GCCATCCACTTCA TCAATCAAACATTGC TERM 825 917322 - 917352 + g 82 -6.2 -4.96657 | overlap 917326 CATTTTAACCCCTTG TAAGGCTTTGGAGT AAT ACACTAAAGCGTTA TTTTCTTCTCTTTCT TERM 826 918769 - 918756 - g 80 -2.3 -5.63517 | opp_overlap 918756 TTTCTAAAGAAAAAA CGCAT TTAG AAGCG TTGTATTATTTGAGC HPSH_04665 918239 - 919699 + | virulence factor MviN cysS 919700 - 921097 + | cysteinyl-tRNA synthetase HPSH_04675 921330 - 925193 + | vacuolating cytotoxin A TERM 827 925203 - 925220 + T 100 -11.3 -4.16016 | opp_overlap 925203 TTCTAAGCTCTAAAA CCCATGC TTTG GCATGGG TTTCTTAAGAAATAA TERM 828 925220 - 925203 - T 100 -11.3 -4.14392 | opp_overlap 925203 TTCTAAGCTCTAAAA CCCATGC TTTG GCATGGG TTTCTTAAGAAATAA HPSH_04680 925345 - 925190 - | hypothetical protein TERM 829 925284 - 925260 - G 79 -8.7 -4.06904 | CCACCCAAGCAGAAA TCCCAAACA TCTTTAG TGTTTGGGA TGAATGCCACTAATT HPSH_04685 926264 - 925497 - | iron(III) dicitrate transporter, ATP-binding protein HPSH_04690 927244 - 926264 - | iron(III) dicitrate ABC transporter, permease protein (fecD) HPSH_04695 928079 - 927237 - | short-chain oxidoreductase TERM 830 927659 - 927642 - G 73 -5.5 -4.59853 | GTAATGGCCTAAAAA GAGCATG CTCA CACGCCC CGCTATGGAAGAAAG TERM 831 927888 - 927873 - G 73 -5.4 -4.59773 | overlap 927886 GCTGATGTTTAAAAA CGCTTC TTTT AAAGCG CTAGAATCGCTCACA TERM 832 928048 - 928060 + g 79 -4.8 -5.13354 | GCTCCGGTGATAACC GCCA CCTTT TGGC TTTCTTTTTTCTCGC HPSH_04700 928220 - 928744 + | hypothetical protein HPSH_04705 929113 - 928847 - | hypothetical protein TERM 833 929076 - 929089 + g 74 -3.9 -5.09426 | opp_overlap 929070 929066 929067 929076, overlap 929067 929079 AGCAATTTATCAAAA TCTTT TTGA AAAGA TTTTTTAAGATTGAG HPSH_04710 929471 - 929094 - | hypothetical protein HPSH_04715 929695 - 929531 - | hypothetical protein TERM 834 929678 - 929664 - G 74 -6.4 -4.4448 | opp_overlap 929664 929665 AAAGCTTTAAAGAAA TCCCCT AAA AAGGGA GTTTTACAAAGAGCC HPSH_04720 931930 - 929699 - | outer membrane protein BabA TERM 835 929828 - 929842 + g 78 -2.8 -5.45652 | overlap 929826 AATGCCATGCTGAGC GGCA TGATCGC TGCC TTTTTTCTTAGACCT TERM 836 931398 - 931409 + g 74 -4.4 -4.90906 | TGGAGGATTTGATAG GCTT GGTT AAGC TTTTTCATGTTATCA HPSH_04725 931997 - 932125 + | hypothetical protein HPSH_04735 933960 - 932848 - | hydrogenase expression/formation protein (hypD) HPSH_04740 934215 - 933979 - | hydrogenase expression/formation protein HypC TERM 837 934226 - 934248 + r 80 -2.7 -5.60993 | CACATTAAAACGAAT GCGTGGA TTGGTAATT TTCACGC TTTTTTTCTAAAAGG HPSH_04745 934943 - 934215 - | hydrogenase expression/formation protein HypB HPSH_04750 935064 - 934960 - | hypothetical protein HPSH_04755 935503 - 935204 - | hypothetical protein HPSH_04760 936719 - 935514 - | acetate kinase TERM 838 935540 - 935554 + g 79 -8.6 -3.98172 | TTTCTGCTATTTCTT TCGCTT GTA AAGCGA TTTCTAGCTCTTCAT HPSH_04765 938293 - 936737 - | phosphotransacetylase TERM 839 937261 - 937293 + g 75 -10 -3.00946 | opp_overlap 937259 937267, overlap 937267 ACATTAAAAACACGC TTGAAACCAGGCTC ACGCC GGGCTTGGTTTTAA TGATTTGTAAAGCGG TERM 840 937267 - 937287 + g 76 -6.8 -4.40993 | opp_overlap 937259 937267, overlap 937261 AAAACACGCTTGAAA CCAGGCTC ACGCC GGGCTTGG TTTTAATGATTTGTA TERM 841 938375 - 938385 + H 77 -5.4 -5.00616 | opp_overlap 938375 CATGATTTTGTAAAA TGCT TTT AGCA TTTTTTACCACACAA TERM 842 938428 - 938411 - H 83 -9.9 -3.89837 | overlap 938409 CACAATGATAAAAGA GCTTGAC GCTA GTCAAGC GGTAGCTGATTAAAA TERM 843 938960 - 938928 - g 85 -2.8 -5.71638 | gap 1, overlap 938938 CAAGAATGAAAAAAA GCCTAATG-GAGTTA CTTC TAACGCTCATCAAGC AAGCTTAACCAATAA HPSH_04770 938515 - 940074 + | hypothetical protein TERM 844 940886 - 940868 - g 70 -8.8 -3.32997 | TTTTGATAAAGGCAA GCCCATGC TGA GAATGGGC GAAATGGTTTTACCT flgD 940125 - 941099 + | flagellar basal body rod modification protein TERM 845 941610 - 941600 - g 75 -5.4 -4.74453 | GAAGACATTGAAAAA TTGC ATG GCAA CACCCTTTCGCCCTT flgE 941096 - 942913 + | flagellar hook protein FlgE HPSH_04785 942972 - 943607 + | putative restriction endonuclease TERM 846 944507 - 944482 - g 70 -2.5 -5.02476 | ATATCCCCTAAAAAA CGCATTTATGT CAAC ACTAAAACGCG CCAAAAAAACCCCTT TERM 847 944694 - 944708 + G 70 -2.9 -5.08824 | CTCTTTAGAAAACGC TCTTT TGCCT AAAGA TTTTTTAAATGAGGA HPSH_04790 943588 - 944736 + | type II DNA modification enzyme (methyltransferase) TERM 848 945070 - 945060 - g 78 -4 -5.23016 | AAAGAATTGAAAAAA CTTT TAG AAAG CATTGTGGATACTAA HPSH_04795 944730 - 946760 + | rep helicase, single-stranded DNA-dependent ATPase TERM 849 946747 - 946766 + F 72 -2.9 -5.23765 | CGGGGCTTTTGAAAC CCGATTT AAAATA AAATTGG TTTTTGTGTTGTTTG TERM 850 946805 - 946834 + F 100 -12.3 -4.371 | opp_overlap 946798 946805 GCTAGCAATCATAGA TTTTAGCTCTAGC TTGC GCTAGAGCCAAAA TTTTAGTATAATGGC TERM 851 946834 - 946805 - f 95 -14.5 -3.02096 | opp_overlap 946805, overlap 946798 GCTAGCAATCATAGA TTTTAGCTCTAGC TTGC GCTAGAGCCAAAA TTTTAGTATAATGGC HPSH_04800 947076 - 947177 + | hypothetical protein HPSH_04805 947287 - 948855 + | outer membrane protein HopC TERM 852 950326 - 950314 - g 74 -4.1 -5.03314 | GGTATCTTGAAAAAA GACTT GAA AAGCC ATAACCAGCATTCTA HPSH_04810 948877 - 950457 + | outer membrane protein HopB TERM 853 950488 - 950462 - T 88 -7.3 -5.00884 | opp_overlap 950469 ACGCCTTCTAAAAAA GCTCAAGGCCT TTTAT AGGCTTTGAAC GAACCCTTTAACTCT HPSH_04815 950672 - 950601 - | hypothetical protein TERM 854 952150 - 952131 - R 73 -7 -3.91897 | TCGCTGATTGAGAAA GTCCCCGC ATAA GCAGGGCC AAGATACTTGTTAAA HPSH_04830 955216 - 952775 - | iron-regulated outer membrane protein TERM 855 954666 - 954654 - G 79 -4.8 -5.10497 | opp_overlap 954661 AAGTTAGTTAAAAAA GTGG CAGCC CCAC TCATGGCGTAGTTTT HPSH_04835 955822 - 955391 - | hypothetical protein carB 959084 - 955827 - | carbamoyl phosphate synthase large subunit TERM 856 956416 - 956427 + g 88 -3 -5.9873 | opp_overlap 956416 TAAACGCCTTTAGAA TATC CCAC GATA TTTTTTTTATCATAG TERM 857 957066 - 957048 - G 77 -6 -4.57341 | opp_overlap 957046 957048 957050, overlap 957050 AAGCTCTTTTAAAAA GAGGGAAA ATT TTTCCCTA TCTTCTGCAATATCA TERM 858 957064 - 957050 - G 77 -8.6 -3.90048 | opp_overlap 957050 957048 957046, overlap 957048 GCTCTTTTAAAAAGA GGGAAA ATT TTTCCC TATCTTCTGCAATAT TERM 859 957640 - 957653 + g 74 -3.9 -5.05782 | opp_overlap 957630 CTAAAGCCTAAATTT TTAAG CCCT CTTAA TTTTTTAGCGTCCGT TERM 860 957812 - 957834 + g 78 -2.7 -5.43621 | overlap 957813 TATAGAGCAAGCGCT TGAAATTCG GCCGG CGGATTTCC TTTTTTATCATTTCT TERM 861 958139 - 958105 - G 77 -7.8 -4.28774 | TCATCTAAGCTAAAA CCCACCGCAAGCATGG TAG CCACTTTTGCAATGGG AAACCCGGTCGCTTT HPSH_04845 959871 - 959179 - | hypothetical protein TERM 862 959677 - 959662 - G 82 -3.9 -5.40004 | CATCAAACCAAAAAA CGCCG CAATTT CAGCG ATAAAAAACACCCAT TERM 863 960477 - 960494 + G 82 -8.4 -4.18762 | GCACGACTAACGCTA TCGCGC CCATTT GCGCGA TTTTAGATAAAGCTT HPSH_04850 960014 - 961009 + | glyceraldehyde-3-phosphate dehydrogenase TERM 864 963544 - 963554 + F 71 -6.8 -4.17048 | GGTTTATAATTTGCA GGCT AAT AGCC TTATTTTCAACAACA TERM 865 964608 - 964568 - f 77 -9.2 -3.24146 | gap 1, overlap 964567 GCTTCTAAGCAAAAT CCTACC-GGTTATAGCTAT GATT ATAGCGATAACCAAGCAGG CACTTATTACTTGAC TERM 866 964818 - 964803 - f 77 -6.2 -4.67048 | CTACCTTAAAAGAAA TGATTG AATC CAATCA ATTAGACAATATCAC TERM 867 967850 - 967862 + F 73 -7.7 -3.762 | opp_overlap 967850 TTTTTAAACCTCAAA TAGGC TTA GCCTA TTATTACATTGGTTT TERM 868 967862 - 967850 - f 73 -7.7 -3.71649 | opp_overlap 967850 TTTTTAAACCTCAAA TAGGC TTA GCCTA TTATTACATTGGTTT HPSH_04865 968318 - 969421 + | outer membrane protein (omp22) HPSH_04870 969684 - 969478 - | 4-oxalocrotonate tautomerase TERM 869 969795 - 969782 - H 70 -2.3 -5.22104 | opp_overlap 969782, overlap 969774 969777 TAAAAAACAATAAAA GCCCT TTTA ATGGC TTTCAAGTCAAGTTA TERM 870 969905 - 969891 - g 78 -4.2 -5.24531 | opp_overlap 969899, overlap 969872 969893 ATTGTTTAGAAAAAA TCCCCA ATG TGGGTA AAAAATCCGCCTTTA recR 969830 - 970411 + | recombination protein RecR truD 970408 - 971553 + | tRNA pseudouridine synthase D HPSH_04885 971540 - 972472 + | heat shock protein HtpX folE 972473 - 973015 + | GTP cyclohydrolase I TERM 871 973761 - 973749 - g 73 -5.5 -4.51224 | opp_overlap 973749 AAGATGAAGAAGAAA GCGGT AAA ACCAC TCATTTAGACGGCGC HPSH_04895 973031 - 973942 + | geranyltranstransferase TERM 872 974546 - 974533 - g 72 -4.5 -4.72201 | TTGTATAAAAAAGAA GTGCA TAAG CGCAC AGACCCCAAAAATGA surE 973939 - 974742 + | stationary phase survival protein SurE HPSH_04905 974739 - 975398 + | hypothetical protein TERM 873 975700 - 975719 + G 70 -3.6 -4.9218 | gap 1, overlap 975695 975702 CGTTCAATTTGAGCG CA-GAGAGT TAC GCTCTCATG TTTTTATACTACCTG HPSH_04910 975402 - 976004 + | hypothetical protein TERM 874 976432 - 976446 + G 78 -4.2 -5.27335 | ATTGCATTTCACCTT GAGCGT CAA ACTCTC TTTTTCTTTAGAGGA TERM 875 976520 - 976510 - g 71 -6.8 -3.97051 | AAATATTTTAAATAA CGCT AAA AGCG CGCATTTTAAATTTG HPSH_04915 976001 - 976756 + | hypothetical protein TERM 876 977062 - 977052 - g 73 -5.4 -4.56597 | GGGCTGGGTCAAAAA CTCT ATG AGAG CGTGGAGCGATACGC TERM 877 977198 - 977226 + G 81 -6.7 -4.82901 | overlap 977225 TTGCGCGGTTGAGTT GGGTGGAGAAACT CTG ATTTTCCCCACTC TTTTTATGGAAAAGA HPSH_04920 976767 - 977252 + | hypothetical protein TERM 878 977566 - 977548 - g 72 -8.8 -3.48276 | opp_overlap 977548, overlap 977533 GGCTTTTTCATAGAA GCCGGGTT TGA AACCGGGC TGTTAGAAGGCACAC HPSH_04925 977473 - 979458 + | putative outer membrane protein HomB HPSH_04930 980765 - 979596 - | proline and betaine transporter HPSH_04935 981407 - 981198 - | hypothetical protein HPSH_04940 982197 - 981475 - | amino acid ABC transporter, permease protein TERM 879 982097 - 982077 - GR 80 -6.9 -4.53439 | opp_overlap 982087, overlap 982087 CTAAAGGCAAAGAAA TGCAAAAAG CGG CTTTTAGCA TGGGGTAGAAAGCCT HPSH_04945 982948 - 982172 - | ABC-type polar amino acid transport,periplasmic component HPSH_04950 983007 - 982945 - | hypothetical protein HPSH_04955 984150 - 983017 - | alanine racemase, biosynthetic (alr) HPSH_04960 985509 - 984157 - | D-alanine glycine permease TERM 880 984629 - 984644 + g 79 -10.4 -3.57561 | opp_overlap 984621 GACACTAGGGCTTGG CGCACC GGGT GGTGCG TTTGAGCGCTTGCAG TERM 881 985470 - 985446 - G 84 -7.9 -4.71426 | TGCCTACTAATAAAA TTTGCATGGGA ATC CCCCACACAAA ATTAGATAACAAACG HPSH_04965 986782 - 985550 - | D-Amino acid dehydrogenase HPSH_04970 987182 - 986805 - | hypothetical protein TERM 882 987545 - 987529 - R 81 -10.9 -2.62983 | CTCAGTGGTAGAGCA CGACCTT GCC AAGGTCG GGGCCGCGGGTTCGA HPSH_04975 987890 - 987594 - | hypothetical protein TERM 883 988071 - 988096 + H 73 -4.1 -4.84914 | CACCATCATTGCAAA TTAAACCAAAT TAAT ATATGGTTTGA TTTTGTTATCTCAAT TERM 884 990087 - 990072 - H 86 -4.8 -5.66868 | AATCAATTAAAAAAA GTTATT CAAA AATAAC CATCAATTATAAAAA TERM 885 990133 - 990154 + H 83 -6.1 -5.1675 | overlap 990131 AAAGAGTAACGCTTT TTAAAAAAA TACA TTTTTTTAA TTTTTTAATCAATCG HPSH_04990 990240 - 990635 + | hypothetical protein TERM 886 990639 - 990672 + T 74 -3.1 -5.2291 | overlap 990641 990647 GTGCGTTTTTAAAGC GTTGTTTGGGGTATT TTTT AATACCCTTATCATC TTTTTCTTATCATCT TERM 887 990647 - 990664 + T 77 -8.5 -3.65068 | overlap 990641 990639 TTAAAGCGTTGTTTG GGGTATT TTTT AATACCC TTATCATCTTTTTCT TERM 888 990925 - 990904 - T 73 -8.7 -3.1876 | opp_overlap 990900 990896 AATGTTAGTTAGGAA GCTCCTTTC TTTA GAAAGGGGC GCTCTCACATTGATT TERM 889 991223 - 991239 + T 76 -3.7 -5.36965 | opp_overlap 991223 CCCCCCTACAAAAAC GCTTCTA ATT TATAAGC TTTTTTATGCTCTTG HPSH_04995 992226 - 991213 - | hypothetical protein HPSH_05000 992688 - 992236 - | hypothetical protein TERM 890 992323 - 992301 - G 80 -10 -3.7511 | opp_overlap 992300 GCTCGCATAAGACAA TTTTAGCCAC TTC ATGGCTAAAA GTCATCTCGCTCAAA TERM 891 992513 - 992525 + g 72 -3.4 -5.01732 | opp_overlap 992513 AAATACGGCTCAAAG GCTA GAGAG TAGC TTTTTTGAGCGAGTT HPSH_05005 993571 - 992702 - | acetyl-CoA carboxylase subunit beta TERM 892 993246 - 993258 + g 78 -2.6 -5.38348 | CTGATCACTGAGCTT GGGC GGTTA GTCC TTTTTTCGTATTTTT TERM 893 994184 - 994160 - g 75 -5.8 -4.67038 | overlap 994155 GTTTGAAAACTAAAA GCCTGAATTT AGAAA AAATCCAAGC TTTTTTTCGCACTCA HPSH_05010 993652 - 994266 + | hypothetical protein HPSH_05015 994277 - 994933 + | hypothetical protein HPSH_05020 995502 - 994936 - | hypothetical protein HPSH_05035 997050 - 996196 - | prolipoprotein diacylglyceryl transferase HPSH_05040 997788 - 997060 - | hypothetical protein HPSH_05045 998987 - 997806 - | 3-deoxy-D-manno-octulosonic-acid transferase HPSH_05050 999752 - 998988 - | hypothetical protein TERM 894 999086 - 999070 - G 73 -7.9 -3.80877 | overlap 999068 999071 TCAGCGTATAAAATA CGCCCGC AAT ACGGGCA AGTGATCATATCCCC HPSH_05055 1000493 - 999762 - | hypothetical protein glyQ 1001391 - 1000495 - | glycyl-tRNA synthetase subunit alpha TERM 895 1000672 - 1000655 - G 75 -2.7 -5.19916 | gap 1 AAAATATTGAAAAAA TGCGA-GC ATA GCATCACA AAATCATAAGCGGGT gpsA 1002343 - 1001405 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase HPSH_05070 1002522 - 1002373 - | hypothetical protein TERM 896 1003144 - 1003170 + r 79 -9.6 -3.29147 | overlap 1003163 TCTTTTGGATCGCTC TTGCTCAGAAAA TTC TTTTTTGAGCGA TTCAATTCTATTAAA HPSH_05085 1006050 - 1003750 - | hypothetical protein TERM 897 1003788 - 1003803 + g 75 -5.4 -4.68655 | TTTGCACATCTATTT GAGCGA TGGA TTGCTC TTTGTTTTGAACTTG TERM 898 1004538 - 1004551 + g 74 -5.2 -4.79826 | TTTGCTTAGCAATAG CGCC CATATC GGCG TTTTTGATCCTGTCT TERM 899 1004830 - 1004842 + g 77 -7.7 -4.15543 | overlap 1004841 TTCTTTTTCTCTTTC CCAAG AAG CTTGG TTTTCAAAATCTTTA TERM 900 1006157 - 1006170 + r 73 -4.5 -4.86216 | TTTCTCTTTTTCTTT TTGCG CGAG CGCGA TTTCTTGTTTTTTAT HPSH_05105 1007695 - 1007543 - | hypothetical protein HPSH_05110 1008189 - 1007902 - | virulence associated protein D (vapD) HPSH_05115 1008538 - 1008257 - | hypothetical protein TERM 901 1008351 - 1008339 - G 75 -7.7 -4.12532 | opp_overlap 1008350 TTTGCTAGAGATAAA GCGAT CTC ATCGC TTAAAAAAAGCTTGA HPSH_05120 1011608 - 1008549 - | putative cation efflux system protein HPSH_05125 1012687 - 1011608 - | cobalt-zinc-cadmium resistance protein TERM 902 1011745 - 1011761 + g 70 -9.5 -2.57132 | opp_overlap 1011744, overlap 1011744 CTTGAACCACCACAG GCCTAAA ACC TTTAGGC GTTCTCACAAACACC TERM 903 1012475 - 1012491 + g 80 -8 -4.3467 | opp_overlap 1012469 CGCATCAAAGCTCAA GCTCTG CACCA CAGAGC TTTTACTATCAAAAT HPSH_05130 1014009 - 1012684 - | hypothetical protein TERM 904 1012842 - 1012827 - GR 72 -4.6 -4.7078 | opp_overlap 1012827 TCAAGTATTCAAAAA GCCCGA TTTT TTGGGC TTCATAAGCGATGCG TERM 905 1013967 - 1013951 - GR 75 -2.9 -5.27335 | overlap 1013952 GCCCCCAAACAAAAA CGCCACA CCC TTTGGCA ACGTTTGAAGCCGCT glyS 1016083 - 1013981 - | glycyl-tRNA synthetase subunit beta TERM 906 1014502 - 1014518 + gH 79 -5.1 -5.09225 | opp_overlap 1014489 AGCTTTGATAAACGC CCACTTT TTC AAAGAGG TTTTTTAAATCCGCT TERM 907 1014619 - 1014606 - GH 79 -6.7 -4.54727 | overlap 1014601 CGCCTTAAAGCAAAA GGATC TTTA GATCC GCTAGGGATTTTACC HPSH_05140 1016195 - 1017262 + | hypothetical protein TERM 908 1017549 - 1017517 - g 70 -9.3 -3.11836 | overlap 1017516 AGATTTAGTTAAAAT TTCTTTAAGCCTTCA AAA CGATGGCTTAAAAAA CAACCCCGCTTTTTT TERM 909 1017770 - 1017756 - g 74 -5 -4.68908 | CTTATTTAAAACAAA TGCAAA ATA TCTGCA ATGAAAACATTCAAA TERM 910 1017988 - 1017998 + G 71 -4 -4.97402 | CGGCATGCAAGATGG TGAA AGC TTCA TTTTTATCAATTTTA HPSH_05145 1017275 - 1018750 + | phosphoglyceromutase gatC 1018765 - 1019046 + | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 911 1019069 - 1019085 + T 84 -8.1 -4.62069 | opp_overlap 1019081 1019082 TGAATAGGTTTCATA TCAAGTT AAA AACTTGA TTTTTGAAATCAAAC TERM 912 1019099 - 1019081 - T 74 -5.4 -4.76892 | opp_overlap 1019069, overlap 1019082 ATATCAAGTTAAAAA CTTGATTT TTG AAATCAAA CAGACAGAAAAAAAC HPSH_05155 1020429 - 1019119 - | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 913 1019415 - 1019431 + g 73 -2.3 -5.26119 | ATTCGCTTAAAGCCT TGTTCTT TTC AATAACA TTTTCTTTTTCAAAA HPSH_05160 1020469 - 1022022 + | conserved hypothetical secreted protein HPSH_05165 1022037 - 1023518 + | cell division protein HPSH_05170 1023653 - 1024801 + | cell division protein FtsZ TERM 914 1024915 - 1024890 - T 71 -7.5 -3.70902 | opp_overlap 1024892, overlap 1024891 1024905 TTTTTTAGAGTGAAA CCGCCCCTTTC TAAA GAAAGGGGCTT CCTAACTAAAGCATT TERM 915 1024914 - 1024891 - T 81 -11 -2.82327 | opp_overlap 1024892, overlap 1024890 1024905 TTTTTAGAGTGAAAC CGCCCCTTTC TAAA GAAAGGGGCT TCCTAACTAAAGCAT TERM 916 1024892 - 1024913 + T 95 -14.5 -3.18264 | opp_overlap 1024891 1024890 1024905 TTTTAGAGTGAAACC GCCCCTTTC TAAA GAAAGGGGC TTCCTAACTAAAGCA HPSH_05175 1024975 - 1024868 - | hypothetical protein HPSH_05200 1027287 - 1026463 - | hypothetical protein TERM 917 1026531 - 1026541 + g 72 -4.6 -4.77157 | TTTCAATGTGGTTAG CGTC TAG GGCG TTTTTAATGCGTTCA TERM 918 1026984 - 1026952 - G 77 -10.7 -2.80533 | opp_overlap 1026952, overlap 1026946 1026951 1026954 GTGTAAAATGATAAG GATTATCCCTCCAGC AAT GCTTGAAAGATAATC TTTTAAAGCCAACGC HPSH_05205 1027479 - 1027300 - | hypothetical protein xseA 1028107 - 1027745 - | exodeoxyribonuclease VII large subunit TERM 919 1027919 - 1027931 + g 79 -3.3 -5.47159 | opp_overlap 1027919, overlap 1027924 CCTAGCCACCACAAT CGCAT CAA AAGCG TTTTTTGTGTTAAGG HPSH_05215 1028193 - 1028113 - | hypothetical protein TERM 920 1028340 - 1028362 + r 71 -5.6 -4.54727 | opp_overlap 1028346, overlap 1028346 TTCTGATTCATTTGA GTAGAACTTG ATA CAAGTTTTCC TTTTGGTTTAAACCG TERM 921 1028346 - 1028356 + r 74 -5.4 -4.74084 | opp_overlap 1028346, overlap 1028340 TTCATTTGAGTAGAA CTTG ATA CAAG TTTTCCTTTTGGTTT HPSH_05220 1029136 - 1028402 - | hypothetical protein HPSH_05225 1029367 - 1029146 - | hypothetical protein HPSH_05230 1029702 - 1029367 - | hypothetical protein HPSH_05235 1030114 - 1029689 - | hypothetical protein HPSH_05240 1030675 - 1030253 - | hypothetical protein HPSH_05245 1030963 - 1030685 - | hypothetical protein HPSH_05250 1031629 - 1030976 - | phage/colicin/tellurite resistance cluster terY protein TERM 922 1032377 - 1032359 - R 75 -8.2 -3.73914 | ATGAGTGATCAAGAA TCTATACC AAC GGCATAGA GAGCTTTTGGAGCTT TERM 923 1032865 - 1032817 - R 90 -12 -3.47349 | opp_overlap 1032817 1032818 1032863, overlap 1032818 1032823 TCTCTAAAGGCACAA GGAAAAGGGAGCTAAAGATAAA ACGCA TTTACCCTTAACTCCCCTTTCT CTTTATAGGGAGCTT TERM 924 1032864 - 1032818 - R 100 -15.5 -2.68088 | opp_overlap 1032818 1032817 1032863, overlap 1032817 1032823 CTCTAAAGGCACAAG GAAAAGGGAGCTAAAGATAAA ACGCA TTTACCCTTAACTCCCCTTTC TCTTTATAGGGAGCT TERM 925 1032859 - 1032823 - R 100 -11.8 -4.50661 | opp_overlap 1032818 1032817, overlap 1032818 1032817 AAGGCACAAGGAAAA GGGAGCTAAAGATAAA ACGCA TTTACCCTTAACTCCC CTTTCTCTTTATAGG TERM 926 1035662 - 1035679 + r 83 -9.9 -3.76413 | TTGCAGTCCTCAACC CCGAATG CAAG CATTCGG TTTGCCCTTTTCCCC HPSH_05255 1036360 - 1036094 - | hypothetical protein TERM 927 1036217 - 1036235 + g 74 -4.6 -4.84529 | opp_overlap 1036217, overlap 1036209 TTTATCAGCTAATGA GCTTTTTA TAT TCAAAAGC TTTTTGGCTTTATAA TERM 928 1036592 - 1036574 - g 83 -5.3 -5.20783 | overlap 1036575 1036589 ACGCAAACATAAAAA CGGAGTT AAAAA AACTCCA TCAAATTTTAGTGGA TERM 929 1037626 - 1037638 + G 74 -6.3 -4.45723 | TACCCTGATTTTGAC GCTTT GAA AAAGC TTTTGGTATCTTATT HPSH_05260 1036552 - 1038303 + | hypothetical protein TERM 930 1038409 - 1038392 - f 77 -8.5 -3.60431 | AAAAGGATTTTTAAA GACTTCT TAAA AGAAGTC AAACAGCACCGCCCC TERM 931 1039013 - 1039023 + F 71 -5.4 -4.58395 | AAGCCAAACATGAGC GCAT TCA ATGC TTTTTCAAAGATAAA TERM 932 1041847 - 1041832 - g 72 -3.2 -5.07107 | opp_overlap 1041834 GAAAGCGGTAAAAAA GACCTT TTAG AGGGTC TTAAAATCGTTACGA HPSH_05290 1041604 - 1042443 + | hypothetical protein HPSH_05295 1042450 - 1042539 + | hypothetical protein TERM 933 1042551 - 1042541 - T 81 -8.2 -4.19735 | opp_overlap 1042525 1042540 1042541 1042549, overlap 1042542 GGGTTGAAAATTAAA CCCC TTT GGGG AGGGGGCTCTCTTTT TERM 934 1042549 - 1042562 + T 76 -4.5 -5.186 | opp_overlap 1042541 1042542, overlap 1042541 1042540 AATTAAACCCCTTTG GGGAG GGGG CTCTC TTTTTCTCTCTTTTA HPSH_05300 1044492 - 1042645 - | arginine decarboxylase HPSH_05305 1045676 - 1044507 - | type 1 capsular polysaccharide biosynthesis protein J HPSH_05310 1046108 - 1045680 - | hypothetical protein HPSH_05315 1046909 - 1046124 - | hypothetical protein TERM 935 1046174 - 1046203 + g 70 -5.7 -4.37092 | overlap 1046179 CCCTTAAAGGAGCGT CATACCCCTCTAA AGTT TTGGAGGGATCTG TTTTATCCAAAAAAT TERM 936 1046482 - 1046494 + g 70 -2.6 -5.02502 | opp_overlap 1046472 TACAAGGCTTTTAAA GCCT CTAGC GGGC TTTTTCTATGGTATA HPSH_05320 1047920 - 1046913 - | hypothetical protein HPSH_05325 1049909 - 1047921 - | methionyl-tRNA synthetase TERM 937 1048343 - 1048358 + g 81 -6.8 -4.66264 | TTTTTTCTTTTTCTG GTGGGA CTTC TCCCGC TTTTTCAGCCTTTTC TERM 938 1049135 - 1049155 + g 79 -5.4 -4.84311 | overlap 1049137 1049144 TACCCACGATATGCC TAGCGCAT GCAAA ATGCGCCA TTTTATTGTCTAAAC TERM 939 1050632 - 1050613 - g 70 -5.6 -4.3739 | overlap 1050625 TATCTCTCTATAAAA GCCGCGCA AGAA TACGGGGC GCAAGTGATGGGGAT TERM 940 1050804 - 1050822 + G 70 -3.1 -4.86731 | CATGTTTGAACATGT GGGTAAG GATAA TTTGCCC TTTTATTTCAAAAAA HPSH_05330 1050079 - 1051248 + | cyclopropane fatty acid synthase (cfa) HPSH_05335 1053122 - 1051251 - | hypothetical protein TERM 941 1052676 - 1052654 - G 93 -11.4 -4.35524 | opp_overlap 1052652 GCCCTAAACGCAAAA GGAAAGCATC GCT GATACTTTCC ACATCTTTTTGTTCG HPSH_05345 1054143 - 1054042 - | hypothetical protein TERM 942 1054138 - 1054116 - G 77 -6.3 -4.59853 | GTAATTTTTCAAAAA TGCCGCT AAAATCAAA AGCGGCA CTCAAAAATGATATT TERM 943 1054200 - 1054181 - R 74 -5.8 -4.57569 | CCACCCTTTTAAAAA GCTATTTT TTTA AAAACAGC TCTAAAGGATTTTTA HPSH_05350 1055018 - 1054236 - | hypothetical protein TERM 944 1054411 - 1054396 - G 74 -6.2 -4.42653 | ATCTTATGCACAAAA GTTTTG GGGA CAAAAC CTCCAGAATTGGTGC HPSH_05355 1055080 - 1055015 - | hypothetical protein guaA 1056597 - 1055071 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 945 1055564 - 1055579 + g 74 -6.1 -4.34771 | CATTCAGGCAATCCG CCCAC ATTATG GTGGG TTTTGATCACTTTTG TERM 946 1056082 - 1056057 - G 82 -7.7 -4.55128 | AGCCGCAAACCAAAA GGGCAAAATTT TCTA AAATCTTACCC CCTTCTTCGCTTTGA HPSH_05365 1057096 - 1056608 - | hypothetical protein HPSH_05370 1059647 - 1057257 - | biotin sulfoxide reductase (bisC) TERM 947 1059099 - 1059114 + g 74 -4.7 -4.85782 | ATAAACTTCCATATC CCCTA CAATCA TAGGG TTTATTTTTGCAGCC HPSH_05375 1060337 - 1059747 - | hypothetical protein HPSH_05380 1061685 - 1060363 - | nifS-like protein TERM 948 1061279 - 1061311 + g 76 -3.5 -5.30199 | opp_overlap 1061285 CCTACAATCACACGC TTTAAAGCCATATCT TTC AAATACGGCTCTAAA TTTTTCTTCGTTTTT HPSH_05385 1062018 - 1061704 - | protein kinase C inhibitor (SP:P16436) TERM 949 1063043 - 1063059 + G 71 -9.5 -2.76315 | overlap 1063023 1063022 1063042 1063045 GATCAATGATTTGCG CAGTTTC TTT GAAACTG ATTTGAGAGTGTTGG pheS 1062099 - 1063085 + | phenylalanyl-tRNA synthetase subunit alpha TERM 950 1063271 - 1063255 - g 88 -8.7 -4.83169 | opp_overlap 1063255 AGCCCCCCATAAAAA CGCTGAA AAA CTCAGCG TGTGTCAAGTGGGTG TERM 951 1065165 - 1065153 - g 72 -9.1 -3.28447 | overlap 1065151 TCATTGATGAGAATA CCGCT TTT AGCGG GATTAAAAAAGCCCT TERM 952 1065209 - 1065187 - g 70 -7.8 -3.68674 | AAAAGCCCTAAAAGA CGCTCAAATC CCT AATTTAAGCG AGATTCTACCCCTTG pheT 1063085 - 1065379 + | phenylalanyl-tRNA synthetase subunit beta TERM 953 1065891 - 1065873 - g 71 -6 -4.2803 | CAGCTCAAGTCAAAA GCGCTT TTATTTT AAGCGC CCTACAAGCTCAAGG HPSH_05400 1065395 - 1066684 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 954 1066833 - 1066814 - g 87 -5.1 -5.40072 | TCGTTTGGAAAAAAA CTTCAAT GTGAAA ATTGAAG AAGACCCTAAAAAAA ispH 1066674 - 1067498 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase rpsA 1067619 - 1069277 + | 30S ribosomal protein S1 HPSH_05415 1069306 - 1069650 + | hypothetical protein TERM 955 1069779 - 1069760 - f 70 -3.6 -4.99035 | CTATTTAGACAAAAA CAAAAAAG AACG CTTTTTAG CTGATTTAGACTATT HPSH_05420 1069839 - 1071413 + | D-3-phosphoglycerate dehydrogenase TERM 956 1071542 - 1071552 + G 82 -8.2 -4.63218 | GAAAAAGCCTAATGG GGGC AAA GCCC TTTTATTCACGCAAC HPSH_05425 1071423 - 1073273 + | hypothetical protein TERM 957 1073405 - 1073390 - g 70 -3.2 -5.00616 | overlap 1073391 GGCTGTTTCAAAAAA CGCTTC CTTA GAAGCC ATTCAAAATTACTAT TERM 958 1073908 - 1073932 + G 89 -5.7 -5.4505 | overlap 1073903 TAGCGATTGCTTGCG GGGCGAATCTT TTA AGGATTGGCTC TTTTTTGTTCAAAGA HPSH_05430 1073283 - 1073951 + | hypothetical protein HPSH_05435 1073953 - 1074711 + | hypothetical protein HPSH_05440 1074715 - 1075650 + | CheA-MCP interaction modulator TERM 959 1076948 - 1076936 - g 77 -7.7 -4.24183 | overlap 1076947 TAGAAGAAAGAAGAA GGCTT AAC AAGCC TGAAACCGGTAAAGT HPSH_05445 1075708 - 1078152 + | autophosphorylating histidine kinase TERM 960 1078441 - 1078430 - g 73 -2.2 -5.27023 | AGCCGAAAAACAAAA CAAG GACA CTCG TTATCTCGTGGTGCG HPSH_05450 1078149 - 1078646 + | purine-binding chemotaxis protein (cheW) TERM 961 1078723 - 1078706 - T 93 -8.5 -4.7373 | opp_overlap 1078707 TTATTCCATTAAAAA GCTTGAT TTTA ATCAAGC GATAACCTTAGCGTT HPSH_05455 1079410 - 1078910 - | thiol peroxidase TERM 962 1080044 - 1080031 - g 74 -3.9 -5.14477 | TAGACACTCAAAAAA TTGAA ATCA TTCAA ACCAGCAACGCTCAA HPSH_05460 1079634 - 1080275 + | iron-dependent superoxide dismutase TERM 963 1080288 - 1080315 + F 76 -6.4 -4.64763 | overlap 1080289 1080290 TAAGCGTTATTGCTG TTGTGGTTTAAA GATT TTTAAACCACGC TTCTTTTTTGGATGA TERM 964 1080289 - 1080314 + F 81 -9.9 -3.37773 | overlap 1080288 1080290 AAGCGTTATTGCTGT TGTGGTTTAAA GATT TTTAAACCACG CTTCTTTTTTGGATG TERM 965 1080290 - 1080313 + F 83 -11.2 -2.61579 | overlap 1080289 1080288 AGCGTTATTGCTGTT GTGGTTTAAA GATT TTTAAACCAC GCTTCTTTTTTGGAT TERM 966 1080520 - 1080533 + G 76 -3.1 -5.25803 | TTTATGATTTGGGCT GTTCT ACCG GGAAC TTTTTTATCGCGCTT TERM 967 1080640 - 1080627 - g 70 -2.5 -5.11112 | AAAGCGCAAGAAAAA TTAAA AGAT TTTAA CAATGCCCGTTTTGA HPSH_05465 1080327 - 1081046 + | hypothetical protein HPSH_05470 1082933 - 1081074 - | primosome assembly protein PriA TERM 968 1081290 - 1081304 + g 87 -6.4 -5.30199 | TTGAGAGGCTTTTAG GCTCAA TTG TTGGGC TTTTTCTTCGTTTTT HPSH_05475 1083154 - 1082918 - | hypothetical protein HPSH_05480 1083394 - 1083167 - | hypothetical protein TERM 969 1084112 - 1084096 - g 95 -2.9 -6.11229 | ACGAAAATAAAAAAA GCTTGAT AAA ACCTAGC CTAAAAGATGCGAGT HPSH_05485 1083597 - 1084343 + | hypothetical protein HPSH_05490 1084878 - 1084351 - | hypothetical protein HPSH_05495 1084844 - 1084981 + | hypothetical protein TERM 970 1086780 - 1086756 - g 70 -7.9 -3.7398 | opp_overlap 1086755 1086756, overlap 1086754 CTTTAATTTAAAAGA GCGTGTTTTCT TAA AAAAAACGCGC CTTTGGGATCGCATG HPSH_05510 1086271 - 1087101 + | protoporphyrinogen oxidase (hemK) TERM 971 1087507 - 1087550 + G 71 -6.7 -4.11216 | opp_overlap 1087507 CAAGTGTTGAAAAAT TCGCTCACCACTTTGGC TATGGGGGGC GCTAAGGGGGGGAGCGA TTTTGACCCTAAAGG TERM 972 1088092 - 1088076 - g 77 -6.5 -4.53303 | opp_overlap 1088076, overlap 1088079 CACCCCCACAGAAAA TTACCCC AAA GGGGGAA ATGCTATATGGCATG HPSH_05515 1087168 - 1088514 + | glutamate dehydrogenase TERM 973 1088515 - 1088531 + T 70 -3.7 -5.00884 | overlap 1088517 GCGCAAGGGGTTTGA TTGGTTT TAC AAACCTA TTTTTTAACCCACCT TERM 974 1088517 - 1088529 + T 71 -6.3 -4.13561 | overlap 1088515 GCAAGGGGTTTGATT GGTTT TAC AAACC TATTTTTTAACCCAC HPSH_05520 1089890 - 1088529 - | alpha-(1,3)-fucosyltransferase HPSH_05525 1092710 - 1089900 - | cytochrome c-type biogenesis protein TERM 975 1089943 - 1089925 - G 71 -7.4 -3.85909 | overlap 1089920 TTAGGCAAACTCAAA TGGCGTTT GAA AGACGCCA AGATCACAAGAGCAA TERM 976 1091188 - 1091199 + g 78 -3 -5.42514 | GATTTTTGATTGACT TCTT CAAC AAGA TTTTTTAATTTATAC TERM 977 1091468 - 1091480 + g 77 -7.7 -4.24326 | AATCCTGGACTTGAA GCCTT TGA AAGGC TTTTAAGTGGTCTTT HPSH_05530 1093390 - 1092719 - | hypothetical protein hemH 1094470 - 1093463 - | ferrochelatase HPSH_05540 1094526 - 1094957 + | hypothetical protein TERM 978 1095222 - 1095187 - g 91 -6.3 -5.52384 | TGGCTAGTAAAAAAA CGCATTTGATTTTAA GCGTGA TTGAAATCAAAAGCG TTGAAAAAATTCTAC HPSH_05545 1094958 - 1095638 + | hypothetical protein HPSH_05550 1097890 - 1095662 - | putative outer membrane protein dcd 1098615 - 1098049 - | deoxycytidine triphosphate deaminase HPSH_05560 1098745 - 1099215 + | biotin carboxyl carrier protein (fabE) TERM 979 1100313 - 1100292 - g 81 -5.9 -5.09173 | GAAGATCCTAAAAAA TTCTACCCA AGCC CGGGTAAAA TCACCGAATGGATCG HPSH_05565 1099221 - 1100588 + | biotin carboxylase HPSH_05570 1100681 - 1101643 + | putative type II DNA modification enzyme (methyltransferase) HPSH_05575 1101643 - 1102191 + | hypothetical protein HPSH_05580 1102240 - 1102884 + | hypothetical protein TERM 980 1103777 - 1103760 - g 73 -5.7 -4.59853 | opp_overlap 1103759 TTAATGCGCCAAAAA TTTTTTG CATG CAAAAAA CTCATTTTAGAAAAT HPSH_05585 1102881 - 1104008 + | spore coat polysaccharide biosynthesis protein C nrdF 1104330 - 1105355 + | ribonucleotide-diphosphate reductase subunit beta pcm 1105365 - 1105994 + | protein-L-isoaspartate O-methyltransferase HPSH_05605 1106005 - 1107042 + | hypothetical protein TERM 981 1107356 - 1107327 - g 90 -3.5 -5.88565 | opp_overlap 1107345 GCTAGAAGAAAAAAA CTTCCATGCGCGT TTTG ACGCTCAAAAAAG AGCGTATCGTTACCT TERM 982 1107737 - 1107712 - g 71 -6.9 -3.9749 | ATCCACAACATCAAA GCCACTATAAG AACG CCCATAATGGC TAATGGCTTGTATTT truA 1107043 - 1107771 + | tRNA pseudouridine synthase A HPSH_05615 1108799 - 1107765 - | UDP-glucose 4-epimerase TERM 983 1108653 - 1108643 - G 71 -6.8 -3.96841 | overlap 1108638 CTTGAACAAACACAA CCCT ATT AGGG TAATAATGCTCTAAC HPSH_05630 1109329 - 1110864 + | putative outer membrane protein TERM 984 1111346 - 1111356 + G 71 -4 -4.96468 | overlap 1111344 1111350 GAGCGAGCAAGGCGT TTGT GAA ACAA TTTTCTTTAAATTTG HPSH_05635 1110886 - 1111638 + | short chain alcohol dehydrogenase HPSH_05640 1112697 - 1111825 - | hypothetical protein TERM 985 1112096 - 1112124 + g 74 -3.7 -5.10077 | overlap 1112097 GGGCTGTCTTTTAAT CCGCAAGCTTTGT CAT ACGAAGCGAGCGC TTTTTTCAAATCTTT TERM 986 1112675 - 1112664 - G 75 -5.8 -4.80455 | opp_overlap 1112663 1112664 CACTCAAACACAAAA CCCT AAAA AGGG ATTTTTTGACATTTT HPSH_05645 1113393 - 1112767 - | 2-keto-3-deoxy-6-phosphogluconate aldolase HPSH_05650 1115238 - 1113412 - | phosphogluconate dehydratase TERM 987 1114385 - 1114397 + g 74 -4.1 -5.1675 | ATTAAGCCTATGAGA GCGTT AAG AATGC TTTTTTCATCAATGA HPSH_05655 1115304 - 1116581 + | glucose-6-phosphate 1-dehydrogenase HPSH_05660 1116592 - 1117275 + | glucose-6-phosphate 1-dehydrogenase (devB) glk 1117262 - 1118272 + | glucokinase TERM 988 1119094 - 1119084 - g 79 -3.2 -5.51612 | ACACAAAAAACAAAA CGCT TTA AGCA TGGGGGTTAAACATT HPSH_05670 1118434 - 1119486 + | NADP-dependent alcohol dehydrogenase TERM 989 1119491 - 1119526 + T 79 -4 -5.42259 | overlap 1119501 CGTTTGATTAAAGGC TTTGGCTCTAGCTCTT TTTT AAGAGCTTGAGTAGGA TTTTTTTAACAATCC HPSH_05675 1120658 - 1119498 - | putative lipopolysaccharide biosynthesis protein TERM 990 1120784 - 1120819 + r 86 -6.2 -5.42259 | overlap 1120785 1120786 GAAAGGTTTTAACCC CTTTACTCTAGCTCTT TTTT AAGAGCTTGAGTAGGA TTTTTTTAACAATCC TERM 991 1120785 - 1120818 + r 83 -9.7 -3.84633 | overlap 1120784 1120786 AAAGGTTTTAACCCC TTTACTCTAGCTCTT TTTT AAGAGCTTGAGTAGG ATTTTTTTAACAATC TERM 992 1120786 - 1120817 + r 81 -11 -2.90056 | overlap 1120785 1120784 AAGGTTTTAACCCCT TTACTCTAGCTCTT TTTT AAGAGCTTGAGTAG GATTTTTTTAACAAT HPSH_05680 1121981 - 1120791 - | putative lipopolysaccharide biosynthesis protein TERM 993 1121058 - 1121020 - G 82 -6 -4.87389 | opp_overlap 1121024, overlap 1121022 GATTTGAAAAACAAA TACGGAGCCTTAAAAAGA ATT TCTTTTGAAGGCGCTGTT GAAGAAAAATAATGT TERM 994 1121056 - 1121022 - G 79 -8.6 -4.04587 | opp_overlap 1121024, overlap 1121020 TTTGAAAAACAAATA CGGAGCCTTAAAAAGA ATT TCTTTTGAAGGCGCTG TTGAAGAAAAATAAT TERM 995 1121024 - 1121054 + g 72 -9.8 -3.01924 | opp_overlap 1121022 1121020 TGAAAAACAAATACG GAGCCTTAAAAAGA ATT TCTTTTGAAGGCGC TGTTGAAGAAAAATA HPSH_05685 1122161 - 1123468 + | hypothetical protein HPSH_05690 1124146 - 1123475 - | outer membrane protein (omp23) HPSH_05695 1124436 - 1124996 + | pyruvate flavodoxin oxidoreductase subunit gamma porD 1125012 - 1125404 + | pyruvate flavodoxin oxidoreductase subunit delta porA 1125414 - 1126637 + | pyruvate flavodoxin oxidoreductase subunit alpha HPSH_05710 1126650 - 1127594 + | pyruvate ferredoxin oxidoreductase, beta subunit TERM 996 1127609 - 1127630 + F 71 -8.7 -3.10091 | opp_overlap 1127609 1127608, overlap 1127603 1127612 ACCCTTCTCTCAAAT CAAGGCGCT TTTT GGCGTCTTG TGTGATTTTCCCCCT TERM 997 1127946 - 1127961 + G 80 -4.6 -5.32944 | overlap 1127948 CGTGGCTGAAAGCCT GGGCGA AGAA TCGCGC TTTTTTCATTATGGG HPSH_05715 1127704 - 1129026 + | adenylosuccinate lyase HPSH_05720 1129095 - 1129928 + | outer membrane protein Horl HPSH_05725 1131901 - 1129925 - | excinuclease ABC subunit B TERM 998 1130050 - 1130060 + g 72 -3.2 -5.07107 | overlap 1130059 CCCTTTCGCTTTTAG GGAT TTT GTCC TTTTTTAAGGCTTTA TERM 999 1130655 - 1130644 - G 73 -7.2 -4.09864 | overlap 1130634 ATTTAGGGTCTAAAA GCCC TGTA GGGC GAATGATTTGCTCAG TERM 1000 1131600 - 1131588 - G 80 -7.7 -4.3255 | opp_overlap 1131586 1131583 TTTTCAATGAATAAA TCCCT TCT AGGGA TATAGCTTTCAGGCT TERM 1001 1131982 - 1131971 - R 77 -3 -5.47399 | TCAATCTCAAAAAAA TCAA TGTT TTGA TAATGATCGGTTTTT HPSH_05730 1132425 - 1132042 - | hypothetical protein HPSH_05735 1133630 - 1132422 - | conserved hypothetical mosaic CUP0956/HP1116/jhp1044-like protein TERM 1002 1133006 - 1133016 + g 78 -4 -5.32565 | TTTCAAAACTTGTAA TCAT ATA ATGA TTTTTTAGTTCGTTA TERM 1003 1133331 - 1133342 + g 74 -4.4 -4.8543 | GACTTGTCCGTTTTT CTCT TGTA AGAG TTTTTCTAACGCTTC HPSH_05740 1134060 - 1133983 - | hypothetical protein HPSH_05745 1134827 - 1134057 - | cysteine-rich protein X HPSH_05750 1134919 - 1134830 - | hypothetical protein HPSH_05755 1136799 - 1135096 - | gamma-glutamyltranspeptidase flgK 1138824 - 1137004 - | flagellar hook-associated protein FlgK HPSH_05765 1139260 - 1138826 - | hypothetical protein HPSH_05770 1140352 - 1139390 - | type II DNA modification enzyme (methyltransferase) HPSH_05775 1140373 - 1140462 + | hypothetical protein HPSH_05780 1140686 - 1140483 - | flgM protein HPSH_05785 1140956 - 1140750 - | hypothetical protein HPSH_05790 1141536 - 1140988 - | peptidyl-prolyl cis-trans isomerase TERM 1004 1141441 - 1141423 - G 73 -6.8 -4.30987 | opp_overlap 1141423, overlap 1141424 AGCGCCTATAATAAA CTCTAAAG GCT CTTTAGAA ATATTACTGTCTAGC HPSH_05795 1142518 - 1141523 - | hypothetical protein HPSH_05800 1143077 - 1142526 - | peptidoglycan-associated lipoprotein precursor tolB 1144397 - 1143144 - | translocation protein TolB HPSH_05810 1145206 - 1144394 - | hypothetical protein HPSH_05815 1145626 - 1145225 - | biopolymer transport protein TERM 1005 1145324 - 1145341 + g 73 -7.1 -4.12941 | TCGTTTGTCCGCGCG GATACTA ACCC TAGTATC TTTATCGTATTTCTT HPSH_05820 1146248 - 1145679 - | biopolymer transport protein atpC 1146630 - 1146259 - | F0F1 ATP synthase subunit epsilon HPSH_05830 1148050 - 1146641 - | F0F1 ATP synthase subunit beta HPSH_05835 1148975 - 1148070 - | F0F1 ATP synthase subunit gamma TERM 1006 1148906 - 1148917 + g 73 -2.2 -5.19916 | TGGAAACGAGTTTCA TCGC ATGC GTGA TTTTTTGCGTGTTTT HPSH_05840 1150501 - 1148990 - | F0F1 ATP synthase subunit alpha HPSH_05845 1151066 - 1150524 - | F0F1 ATP synthase subunit delta HPSH_05850 1151582 - 1151067 - | F0F1 ATP synthase subunit B HPSH_05855 1152020 - 1151586 - | F0F1 ATP synthase subunit B' HPSH_05860 1153003 - 1152131 - | plasmid replication-partition related protein TERM 1007 1152182 - 1152192 + g 75 -5.4 -4.75309 | opp_overlap 1152182 1152180, overlap 1152177 AGAATTTTCATAACA TCGT AAA ACGA TTTTATTCCCTTTCA TERM 1008 1152283 - 1152299 + g 71 -5.1 -4.53077 | overlap 1152284 CAGCGATGAGCGTTT GGGTTTC CTT GAAACCA TGTTTTTTATTTTCA TERM 1009 1152284 - 1152298 + g 70 -8.6 -3.29406 | overlap 1152283 AGCGATGAGCGTTTG GGTTTC CTT GAAACC ATGTTTTTTATTTTC HPSH_05865 1153803 - 1153006 - | SpoOJ regulator (soj) HPSH_05870 1154444 - 1153806 - | biotin--protein ligase fmt 1155337 - 1154441 - | methionyl-tRNA formyltransferase HPSH_05890 1159161 - 1157863 - | hypothetical protein TERM 1010 1158612 - 1158625 + g 82 -3.9 -5.52384 | overlap 1158611 GCTCTTCTTGCTGCT TGAAT TTCA ATTCA TTTTTTTCATGCAAG TERM 1011 1159340 - 1159354 + H 75 -7.1 -4.18488 | overlap 1159351 TATTAAAACCCTACA GCGCA TTTAT TGCGC TTTCTTGCGCTCAAT HPSH_05895 1159424 - 1159531 + | hypothetical protein HPSH_05900 1160013 - 1159918 - | hypothetical protein TERM 1012 1160114 - 1160097 - H 74 -9.1 -3.07291 | opp_overlap 1160097, overlap 1160087 1160084 AAGGAGGTGATCCAA CCGCAGG TTCA CCTACGG TTACCTTGTTACGAC TERM 1013 1161512 - 1161491 - H 73 -9.5 -2.77899 | opp_overlap 1161491, overlap 1161488 GTGCGCCACTAATCA GCCTTCTAG CAAG CTAGAAAGC TTCATCGTTCGACTT TERM 1014 1161663 - 1161693 + H 81 -9.2 -3.84389 | opp_overlap 1161663 AGCGTATCACAAGAA CTCGTTTTATTTGA TTA TTGAATAAAACGGG TTGTGTTCTTAAGTA HPSH_05905 1162228 - 1162320 + | hypothetical protein HPSH_05910 1163117 - 1162317 - | hypothetical protein TERM 1015 1163018 - 1163043 + g 81 -2.6 -5.53288 | AACTAAAATCAGGCT CCTTAAAACG CTTGTC TGTTTTGGGG TTTTTTTGGATTGCC HPSH_05915 1163177 - 1163266 + | hypothetical protein TERM 1016 1163409 - 1163387 - T 83 -7.1 -4.65933 | overlap 1163401 TATTCTTAAAAGAAA GGGTTAAAA ACTTA TTCTAACCC TTAAAAAGAAATTAA rplS 1163777 - 1163421 - | 50S ribosomal protein L19 TERM 1017 1163754 - 1163769 + g 70 -3.2 -4.91573 | TTGAGCGTCTTCAAA CTGCTG AATG TAGCGG TTTTTCATGTGTTTT trmD 1164488 - 1163799 - | tRNA (guanine-N(1)-)-methyltransferase HPSH_05930 1165043 - 1164489 - | 16S rRNA processing protein TERM 1018 1164580 - 1164568 - G 86 -7.7 -4.96848 | overlap 1164548 TCTTTGATATAAAAA TCCCT ATA AGGGA TTAAAAAAATCTTAG TERM 1019 1165069 - 1165086 + r 70 -4.1 -4.72272 | opp_overlap 1165069 TGATCGCCTAAAACA TGGGGAT TTTT ATCGCCA TTTTTACTAGCAAAA HPSH_05935 1165391 - 1165044 - | hypothetical protein TERM 1020 1165267 - 1165253 - G 73 -7.1 -4.09685 | CTTTATCTTCTAAAA GCGTG TGCTC CACGC TCAAAGCTTGAGGAA rpsP 1165638 - 1165408 - | 30S ribosomal protein S16 HPSH_05945 1167058 - 1165712 - | signal recognition particle protein TERM 1021 1166931 - 1166942 + g 70 -3 -5.01732 | TCCCTAGCCACTTTA TGAT GCAC ATCA TTTTTTAAGAGCGTT valS 1169691 - 1167073 - | valyl-tRNA synthetase TERM 1022 1168804 - 1168821 + g 72 -8.3 -3.58037 | overlap 1168816 ATCAAAGATTTTAAT CGCCTCC AAAT GGTGGCG TTTGCCCACTTCATA TERM 1023 1169564 - 1169575 + g 85 -3 -5.8187 | opp_overlap 1169564 GGGGGCATCATCAAG CAAA ATCG TTTG TTTTTTTCTTGGATC HPSH_05955 1169829 - 1170236 + | flagellar assembly protein FliW TERM 1024 1170400 - 1170411 + G 74 -4.4 -5.00616 | overlap 1170408 AAATAGCCCCCTATT TAGC GAAC GCTA TTTTTTCAACACGCA TERM 1025 1170408 - 1170445 + G 72 -3.5 -5.0133 | gap 1, overlap 1170400 CCCTATTTAGCGAAC GCTATTTTTTCAACACGC AAG GCGTGGTCAATAAA-AGC TTTTTTAAAAAAATA murG 1170248 - 1171309 + | N-acetylglucosaminyl transferase HPSH_05965 1171417 - 1173507 + | outer membrane protein HopI TERM 1026 1173765 - 1173753 - g 74 -9.1 -3.57561 | opp_overlap 1173753 CTTTAAGCTCTCAAA GCGTC ATT GACGC TTTAGGCTATGGCGT TERM 1027 1173753 - 1173765 + G 76 -9.1 -3.63805 | opp_overlap 1173753 CTTTAAGCTCTCAAA GCGTC ATT GACGC TTTAGGCTATGGCGT TERM 1028 1176822 - 1176846 + G 73 -2.1 -5.26918 | overlap 1176815 GCGTGAAAGCGAATA TCTTTGCTTAT GGG GTAGGCACGGA TTTTTTATGGAATCT HPSH_05970 1173530 - 1177219 + | outer membrane protein HopL TERM 1029 1177419 - 1177433 + G 75 -2.8 -5.18355 | opp_overlap 1177419 GACGCTATTGATATA CACCAA AAA TTCGTG TTTTTACTTTTTAAG HPSH_05975 1177233 - 1177988 + | pyrroline-5-carboxylate reductase HPSH_05980 1178032 - 1178565 + | cell filamentation protein HPSH_05985 1179045 - 1178623 - | putative metalloprotease TERM 1030 1179089 - 1179073 - R 100 -10.9 -5.07053 | opp_overlap 1179073 AAGGAGTTTAAAAAA GCCCTAA AAT TTAGGGC TTATAAGATTAAGCG TERM 1031 1179073 - 1179089 + r 87 -10.9 -3.36492 | opp_overlap 1179073 AAGGAGTTTAAAAAA GCCCTAA AAT TTAGGGC TTATAAGATTAAGCG HPSH_05990 1179592 - 1179098 - | flavodoxin FldA HPSH_05995 1180262 - 1179681 - | hypothetical protein HPSH_06000 1180384 - 1180575 + | cation transport subunit for cbb3-type oxidase HPSH_06005 1180601 - 1181572 + | thioredoxin reductase TERM 1032 1182272 - 1182246 - f 79 -3.7 -5.53991 | CATGGATTAAAAAAA TCCCCACGATA TACAG CATCGTATGGA CTTTGAGATACAAAA TERM 1033 1182906 - 1182918 + G 72 -3.3 -5.12707 | opp_overlap 1182904 CTAAAGACAAAGAGC GAGCG AGC CGCTA TTTTTTGCAATTTGA TERM 1034 1183669 - 1183687 + G 77 -9.6 -3.46647 | overlap 1183667 GAAGAAAAATTTTAA CGCTCTTT TGA AAGGAGCG TATTTGATGGATGAG TERM 1035 1184171 - 1184182 + G 79 -5.8 -5.00616 | GCCAAAGATTTAGCC CACC ACAG GGTG TTTTTTGGCAACCGC HPSH_06020 1182809 - 1184446 + | glucose-6-phosphate isomerase (pgi) HPSH_06025 1184520 - 1184434 - | hypothetical protein TERM 1036 1184530 - 1184547 + H 85 -8.5 -4.09243 | opp_overlap 1184530 ATCCATTCAAAATAA TCCGTTA ATCA TAACGGA TTTTAGCGCCATATG TERM 1037 1184547 - 1184530 - H 85 -8.5 -4.22214 | opp_overlap 1184530 ATCCATTCAAAATAA TCCGTTA ATCA TAACGGA TTTTAGCGCCATATG HPSH_06030 1184755 - 1186170 + | outer membrane protein HofH TERM 1038 1186159 - 1186173 + T 76 -10 -2.82834 | TACACGGCCCTAGTA GCGTCA TTT TGACGC TATGATCATAAAATA TERM 1039 1186192 - 1186211 + T 73 -7.2 -4.05747 | gap 1, opp_overlap 1186191 1186192 1186194, overlap 1186195 GATCATAAAATATAG CAGGCGTCA TTT TGACG-CTG TTTCTCTAACCTATA TERM 1040 1186195 - 1186209 + T 82 -10 -3.61946 | opp_overlap 1186194 1186192 1186191, overlap 1186192 CATAAAATATAGCAG GCGTCA TTT TGACGC TGTTTCTCTAACCTA HPSH_06035 1186341 - 1186222 - | hypothetical protein TERM 1041 1186341 - 1186299 - G 73 -7.3 -4.12188 | gap 1, overlap 1186303 CCATCATCTTTAAAA TTGAGCTTTTAAAAAAGCAA GCGA TAGCTTTTTTAAGAGC-CAA GAACAGAAACCCCAA TERM 1042 1186417 - 1186430 + r 90 -8.1 -5.16151 | opp_overlap 1186416 1186417 TCCATGGATTTAAAG GGGGT TAAA ACCCC TTTTTATTGGCTTTG HPSH_06040 1188496 - 1186421 - | carbon starvation protein TERM 1043 1186600 - 1186612 + g 75 -5.5 -4.75372 | AAAAGGATTTTTGGA GCGTT TTT AGCGC TTTTTCATCGGTAGT TERM 1044 1187178 - 1187166 - G 85 -9.1 -4.2237 | AAACCAATCGCAAAA GTGGG CGC CCCAC CGGTGCGGCTCAAAA TERM 1045 1189109 - 1189095 - g 73 -7.2 -4.07568 | opp_overlap 1189095 TTGGCCCTTTGAAAA TGATGT ATT ACATCA TTTTACCTCAAAGTT TERM 1046 1189095 - 1189109 + G 76 -7.2 -4.18762 | opp_overlap 1189095 TTGGCCCTTTGAAAA TGATGT ATT ACATCA TTTTACCTCAAAGTT HPSH_06045 1188707 - 1189360 + | glutamine ABC transporter, permease protein TERM 1047 1189944 - 1189956 + G 75 -2.7 -5.22258 | CTTTGTGGTTTATGG CGTTA TCT TAATG TTTTATTTTAGTTTA HPSH_06050 1189363 - 1190034 + | glutamine ABC transporter, permease protein (glnP) TERM 1048 1190155 - 1190169 + G 70 -2.8 -5.05782 | opp_overlap 1190166 TTTAGGGCCTAGCGG GTGC GGGAAAA GCAC TTTTTTAAAATGCCT HPSH_06055 1190036 - 1190782 + | glutamine ABC transporter, ATP-binding protein (glnQ) HPSH_06060 1190831 - 1191664 + | glutamine ABC transporter, periplasmic glutamine-binding protein TERM 1049 1191651 - 1191664 + F 73 -3.9 -5.1361 | opp_overlap 1191651, overlap 1191637 TCAAACCGGAAGAAA TCATT TTTG AATGA TTTTTTAGGCTTTGT TERM 1050 1191701 - 1191727 + G 81 -3 -5.67529 | overlap 1191703 1191704 GATGGAGCGTGTTTT GATCGCTAAATT AGC GGTTTTGTGATC TTTTTGTTTTTAATT TERM 1051 1191703 - 1191717 + G 77 -6.4 -4.62069 | overlap 1191701 1191704 TGGAGCGTGTTTTGA TCGCTA AAT TAGCGG TTTTGTGATCTTTTT HPSH_06065 1191657 - 1191725 + | hypothetical protein HPSH_06070 1191785 - 1192336 + | hypothetical protein TERM 1052 1192364 - 1192389 + T 72 -2.6 -5.3321 | overlap 1192365 GCTCCATTCTTAAAA TCTCTTAATC TTTTGT GGTTAGGAGG TTTTTCTTATTCGTT HPSH_06075 1193775 - 1192552 - | glucose/galactose transporter TERM 1053 1193904 - 1193889 - R 83 -7.6 -4.64992 | GGTAAAAAATACAAA GCTCTT TAAA AAGAGC TTAACGAAAGATAAA HPSH_06080 1195212 - 1193905 - | hypothetical protein TERM 1054 1194033 - 1194013 - G 72 -3.1 -5.16133 | overlap 1194014 ACCATAAGACAAAAA GCCAAAGGC TAA GCCATCGGT AATGGAAAAGGTTAA TERM 1055 1194906 - 1194891 - G 76 -4.6 -5.02439 | overlap 1194892 ACAGAATCACAAAAA TCGCTC CAGA GAGCGC TACGATGCCTAAAGC HPSH_06085 1195408 - 1195325 - | hypothetical protein TERM 1056 1195659 - 1195635 - g 73 -7.9 -3.87373 | opp_overlap 1195636, overlap 1195636 GAGATTTTTTAGAAA CCCCTCCTTTT TTA AAAAAGAGGGT TTTTAATAAGCGAAC TERM 1057 1195636 - 1195658 + G 89 -9.2 -4.72272 | opp_overlap 1195635 1195636 AGATTTTTTAGAAAC CCCTCCTTTT TTA AAAAAGAGGG TTTTTAATAAGCGAA TERM 1058 1195658 - 1195636 - g 80 -11.4 -2.92102 | opp_overlap 1195636, overlap 1195635 AGATTTTTTAGAAAC CCCTCCTTTT TTA AAAAAGAGGG TTTTTAATAAGCGAA HPSH_06090 1195547 - 1195684 + | hypothetical protein HPSH_06095 1197587 - 1195662 - | outer membrane protein (omp27) TERM 1059 1195743 - 1195732 - G 70 -3 -5.02074 | opp_overlap 1195732 TTAGTGTCTAAAAAA GAAT AGTA ATTC GTGTTAATGGTAGGG HPSH_06100 1197737 - 1197847 + | hypothetical protein HPSH_06105 1198563 - 1197859 - | purine-nucleoside phosphorylase HPSH_06110 1199801 - 1198560 - | phosphopentomutase HPSH_06115 1201069 - 1199813 - | pyrimidine nucleoside transport protein (nupC) TERM 1060 1201306 - 1201296 - H 76 -2.6 -5.40625 | AGATTATACAAAAAA TTTT CTT AAAA ATCCATTAAAATTAC TERM 1061 1202026 - 1202044 + G 71 -3.8 -4.93296 | opp_overlap 1202012 1202029, overlap 1202012 1202013 1202029 AGCTCTTTTTTTGAA AAAGCGTT CAT GACGCTTA TTTTTGTGCTGATCC TERM 1062 1202029 - 1202041 + G 73 -5.5 -4.56153 | opp_overlap 1202012 1202029, overlap 1202012 1202013 1202026 TCTTTTTTTGAAAAA GCGTT CAT GACGC TTATTTTTGTGCTGA TERM 1063 1202041 - 1202029 - g 71 -4.8 -4.56597 | opp_overlap 1202012 1202013 1202029 1202026, overlap 1202012 TCTTTTTTTGAAAAA GCGT TCATG ACGC TTATTTTTGTGCTGA HPSH_06120 1201396 - 1202727 + | multidrug-efflux transporter TERM 1064 1202791 - 1202769 - g 90 -9.2 -5.07107 | GAAATTTCTAAAAAA GTCTTACACA TTG TGGGTAAGAC CAACGCCACTTACAA TERM 1065 1203421 - 1203409 - g 77 -6.3 -4.65263 | ATTTCTTAAAAGAAA TGCAA AAC TTGCA CCCTCATTTCTTTGA HPSH_06125 1202745 - 1203506 + | hypothetical protein TERM 1066 1203507 - 1203520 + T 74 -2.4 -5.49234 | opp_overlap 1203475, overlap 1203475 TATTTAGACGCTTAA GCTT TCATTC AAGC TTTTTTGTTGAGTAT HPSH_06130 1204666 - 1203515 - | NA+/H+ antiporter (napA) HPSH_06135 1206071 - 1204692 - | hypothetical protein TERM 1067 1204729 - 1204742 + g 76 -2.3 -5.40004 | opp_overlap 1204729, overlap 1204711 TTTTTCTCTTTATAA GCGGT AAAA ACCCC TTTTTTGATTTCGTA HPSH_06140 1207403 - 1206231 - | sugar efflux transporter TERM 1068 1206406 - 1206395 - G 81 -5.8 -5.00884 | overlap 1206396 1206397 AGCTCCCCGAAAAAA TCGC GCTC GCGA CATCCGTGGCATCTG TERM 1069 1206543 - 1206533 - G 85 -5.4 -5.19879 | TTTTAAACACAAAAA GCAA AAG TTGC GGGCAAATGACTAAA TERM 1070 1206577 - 1206560 - G 74 -6.3 -4.39386 | opp_overlap 1206560 1206563, overlap 1206571 GGCAAATGACTAAAA TCATCGC AAAA GCGATAA ATTTTCTTGAATTTT TERM 1071 1207348 - 1207338 - G 74 -4.6 -4.85782 | GGTGTTAAAAATAAA CGCC GAA AGCG AAAACACAAAAACCC TERM 1072 1207382 - 1207355 - G 83 -10.7 -3.78026 | overlap 1207353 1207361 CCGAAAGCGAAAACA CAAAAACCCGC ATTAAG GCGAGTTTTTG ATACGATTGTTTGGT TERM 1073 1207376 - 1207361 - G 78 -3.9 -5.28983 | overlap 1207355 1207353 GCGAAAACACAAAAA CCCGC ATTAAG GCGAG TTTTTGATACGATTG TERM 1074 1207790 - 1207771 - g 78 -4.2 -5.3167 | gap 1, overlap 1207774 CAAAAATAAAGAAAA TGACCC-GC ACC GCTGGGACA AATTGCACAAAGATT HPSH_06145 1207682 - 1208425 + | carbonic anhydrase TERM 1075 1208466 - 1208446 - f 88 -6.9 -5.0925 | CGCTAAAATTAAAAA TCTCTCTTT TGT AAAGAGGGA GATAAAAATCATTCT HPSH_06150 1208712 - 1210526 + | hypothetical protein HPSH_06155 1211746 - 1210706 - | aspartate-semialdehyde dehydrogenase TERM 1076 1210909 - 1210919 + g 76 -4.6 -5.055 | CATCGCAAACAACCA CGCT AGG GGCG TTTTTTAAAACTTCA hisS 1213061 - 1211733 - | histidyl-tRNA synthetase TERM 1077 1211966 - 1211976 + g 70 -8.2 -3.64703 | opp_overlap 1211947 1211965 TTTGCCTTAAAGACT CCGC TAA GCGG TTTGCATAAGAAAAA HPSH_06165 1213123 - 1214172 + | ADP-heptose-lps heptosyltransferase II TERM 1078 1214359 - 1214316 - T 83 -9.8 -3.72941 | opp_overlap 1214330, overlap 1214330 AGAAAAATTATAGAA TGGTATCTAAAAAAGCGTTT TTAA AAACGCTTTTTTAGAGTCAA AGCCATTAGGCCACT TERM 1079 1214345 - 1214330 - T 88 -7.6 -5.09225 | opp_overlap 1214330, overlap 1214316 ATGGTATCTAAAAAA GCGTTT TTAA AAACGC TTTTTTAGAGTCAAA TERM 1080 1214330 - 1214345 + T 88 -7.6 -5.0538 | opp_overlap 1214330 1214316 ATGGTATCTAAAAAA GCGTTT TTAA AAACGC TTTTTTAGAGTCAAA HPSH_06170 1214691 - 1214365 - | hypothetical protein TERM 1081 1214870 - 1214847 - H 83 -6.8 -5.00884 | opp_overlap 1214853, overlap 1214853 1214855 ATTTTCCTTAAAAAA TAAAAACGCT CAAA AGCGTTTTTT AAGATTGAAGACAAA TERM 1082 1214853 - 1214864 + H 83 -5.8 -5.09426 | opp_overlap 1214847 1214853 1214855 CTTAAAAAATAAAAA CGCT CAAA AGCG TTTTTTAAGATTGAA TERM 1083 1214864 - 1214853 - H 88 -5.8 -5.75538 | opp_overlap 1214853, overlap 1214847 1214855 CTTAAAAAATAAAAA CGCT CAAA AGCG TTTTTTAAGATTGAA TERM 1084 1214906 - 1214889 - g 78 -2.7 -5.48063 | ATTGAAGACAAAAAA GCTTG TGATTAGT CAAGC GGAATTTCTTAATAA HPSH_06175 1214875 - 1214985 + | hypothetical protein TERM 1085 1215024 - 1215012 - T 75 -4.9 -4.88795 | ACTTAAGAAAATAAA CTTTA CTA TAAAG CAAGGTAACCAAAAC TERM 1086 1215148 - 1215136 - T 88 -7.7 -5.07275 | TTAGAGAGATAAAAA GGGTT AAA AACCC TCAAAAAAGTCTTTT HPSH_06180 1217311 - 1215233 - | elongation factor G HPSH_06185 1217790 - 1217323 - | 30S ribosomal protein S7 rpsL 1218213 - 1217806 - | 30S ribosomal protein S12 TERM 1087 1218204 - 1218215 + g 70 -3 -5.01845 | TAATCAACTGATTGA TAGT AGGC ACTA TTTTTCCTTATTCTA HPSH_06195 1226973 - 1218301 - | DNA-directed RNA polymerase subunit beta/beta' TERM 1088 1218580 - 1218594 + gH 79 -5 -5.1675 | overlap 1218581 GATCACACGAGCGTT TTCTTC TTT GAAGAG TTTTTTACTGACTAA TERM 1089 1222737 - 1222748 + gH 76 -4.4 -5.02074 | opp_overlap 1222737 TAACTTCCCCATAAC TCCA AGAA TGGA TTTTTTCAGGACTGG TERM 1090 1226116 - 1226128 + gH 83 -6.3 -4.89521 | opp_overlap 1226084, overlap 1226105 CATAGGGTATTCCAC CCATT CTA AATGG TTTTCTTTAAGCTCT HPSH_06200 1226967 - 1227158 + | hypothetical protein rplL 1227574 - 1227197 - | 50S ribosomal protein L7/L12 rplJ 1228114 - 1227620 - | 50S ribosomal protein L10 rplA 1228927 - 1228223 - | 50S ribosomal protein L1 TERM 1091 1228405 - 1228421 + g 77 -5.1 -4.83615 | TCGCCTTACCAATAG GGGCA TGAACAT TGCCC TTTTTATCCACCCTG rplK 1229397 - 1228972 - | 50S ribosomal protein L11 nusG 1229942 - 1229415 - | transcription antitermination protein NusG secE 1230151 - 1229972 - | preprotein translocase subunit SecE TERM 1092 1230258 - 1230248 - R 70 -4 -4.95854 | TAAAAAATTTAAAAA CAAT CCA ATTG AAACACAAATTTGAT rpmG 1230563 - 1230405 - | 50S ribosomal protein L33 HPSH_06240 1231796 - 1230597 - | elongation factor Tu TERM 1093 1231956 - 1231972 + H 72 -9.5 -2.65815 | opp_overlap 1231946 1231968 TTGAACCGCCGACCT CTTCCTT ACC AAGGAAG TGCTCTGCCTCTGAG TERM 1094 1232599 - 1232623 + G 70 -9.5 -2.66395 | overlap 1232598 1232603 CATGCTCATCACTTT CAAGGAAAAAA TGG TTTTTTTCTTG CTTGTGCTGATGGCT TERM 1095 1233949 - 1233960 + G 75 -3 -5.24129 | GGTGTGCAAAATGGC TCAT ATTT ATGA TTTTTTATGCGAACA HPSH_06245 1232519 - 1234255 + | ABC-transporter, ATP-binding domain HPSH_06250 1234932 - 1234264 - | hypothetical protein HPSH_06255 1236025 - 1235036 - | ulcer associated adenine specific DNA methyltransferase HPSH_06260 1236523 - 1236380 - | hypothetical protein HPSH_06265 1237260 - 1236745 - | serine acetyltransferase TERM 1096 1237103 - 1237081 - G 85 -9 -4.1552 | TATCCCGGTAATAAA GCGCGCTAAC TGA GAAAGCGCGC GCGCAATAAAATAAA HPSH_06270 1237420 - 1237301 - | hypothetical protein TERM 1097 1237386 - 1237371 - G 71 -7.6 -3.90291 | overlap 1237357 AGCTTTCTAACTAAA GCATTC CATT GAATGC TAACACGAAAGGCTT HPSH_06275 1238231 - 1237914 - | F0F1 ATP synthase subunit C HPSH_06280 1240434 - 1238368 - | polynucleotide phosphorylase/polyadenylase TERM 1098 1239431 - 1239417 - G 75 -5.6 -4.67982 | overlap 1239421 CCCTAGTGAATAAAA TGGAGC TAT GCGCCA TAGGGAGCAAATCGC HPSH_06285 1241141 - 1240437 - | hypothetical protein HPSH_06290 1243417 - 1241156 - | organic solvent tolerance protein TERM 1099 1242365 - 1242353 - G 71 -6.3 -4.14633 | CAGGTTTAAAAAATA CTTGA TAT TCAAG CCGTAATAATGATTT HPSH_06295 1243899 - 1243420 - | hypothetical protein TERM 1100 1243936 - 1243911 - R 88 -7 -4.89063 | opp_overlap 1243916 1243916 GCATTCAAAAACAAA CAAGACAAAC TCTTTG GTTTGTCTTA AACTTCAAGAGTATT HPSH_06300 1245215 - 1243941 - | glycinamide ribonucleotide synthetase HPSH_06305 1245335 - 1245526 + | hypothetical protein HPSH_06310 1246214 - 1245528 - | ABC transporter, ATP-binding protein HPSH_06315 1246912 - 1246208 - | putative undecaprenyl pyrophosphate synthase HPSH_06320 1249792 - 1246952 - | D-lactate dehydrogenase TERM 1101 1247659 - 1247670 + g 85 -5.8 -5.18371 | AAATGACTTTTTCTT CGCT CTTA AGCG TTTTATTTTCTAAGG TERM 1102 1247835 - 1247823 - G 76 -3.3 -5.27335 | opp_overlap 1247823 1247827, overlap 1247826 1247827 CTTTTTAAAGAAAAA CGAGC CAC GCTTG TGGTTGTTTGCATGT HPSH_06325 1249864 - 1250196 + | hypothetical protein hemD 1250199 - 1250879 + | uroporphyrinogen-III synthase HPSH_06335 1250926 - 1251318 + | hypothetical protein TERM 1103 1251323 - 1251334 + T 77 -5.8 -4.65747 | opp_overlap 1251315 1251323, overlap 1251315 1251332 GCATTAATTAAAAAA CGCT TTTT AGCG TTTTATTAACGCTTG TERM 1104 1251334 - 1251323 - T 84 -5.8 -5.30155 | opp_overlap 1251315 1251323 1251332, overlap 1251315 GCATTAATTAAAAAA CGCT TTTT AGCG TTTTATTAACGCTTG HPSH_06340 1252401 - 1251364 - | coproporphyrinogen III oxidase TERM 1105 1252631 - 1252617 - g 72 -4.3 -4.66535 | AAGTTTGAAAAGAAA GCTTT AGGCA AAAGC AAAATCGTCAACATG HPSH_06345 1252497 - 1252787 + | hypothetical protein HPSH_06350 1252946 - 1253419 + | dinucleoside polyphosphate hydrolase HPSH_06355 1253413 - 1254630 + | aspartate kinase TERM 1106 1255145 - 1255130 - g 86 -10.4 -4.10453 | CAAACTCTTTGAAAA CGCGCT TTTT AGCGCG CTATACAATAAGATC HPSH_06360 1254627 - 1255169 + | hypothetical protein HPSH_06365 1255166 - 1255822 + | DNA polymerase III subunit delta' HPSH_06370 1255819 - 1256961 + | dihydropteroate synthase (folP) HPSH_06375 1257447 - 1256986 - | hypothetical protein TERM 1107 1258083 - 1258095 + G 87 -3.3 -5.70829 | overlap 1258077 1258084 CGTTGTAGGGGGCTT GGCCA TGT TGGCG TTTTTTTATAATATT TERM 1108 1258084 - 1258094 + G 71 -6.8 -4.00057 | overlap 1258077 1258083 GTTGTAGGGGGCTTG GCCA TGT TGGC GTTTTTTTATAATAT HPSH_06380 1257841 - 1258737 + | hypothetical protein HPSH_06385 1258741 - 1259988 + | hypothetical protein HPSH_06390 1260068 - 1259985 - | hypothetical protein TERM 1109 1260379 - 1260359 - gH 85 -9 -4.15044 | TGTTTTGGGAAGAAA GGTGCAAC GATTT GTCGCACC AAATTTTGAATAAAA HPSH_06395 1260067 - 1260618 + | hypothetical protein TERM 1110 1261333 - 1261312 - g 76 -2.3 -5.36018 | gap 1 ATGAAAAAAAAGAAA TTAGCG-GGA TTT TCCTCTCTAA CGGGCCAGGTGATCC HPSH_06400 1260618 - 1261745 + | carbamoyl phosphate synthase small subunit TERM 1111 1261857 - 1261895 + F 100 -12 -4.08692 | opp_overlap 1261855 1261858, overlap 1261858 TTCTCTTGCAATAGT ATTTTATCGCAATAACTA TTA TTGTTATTGCGATAAAAC TTTTAGAAGGAGTTA TERM 1112 1261894 - 1261858 - f 100 -15.5 -2.73875 | opp_overlap 1261857 1261858, overlap 1261855 TCTCTTGCAATAGTA TTTTATCGCAATAACTA TTA TTGTTATTGCGATAAAA CTTTTAGAAGGAGTT TERM 1113 1261858 - 1261894 + F 100 -15.5 -3.04894 | opp_overlap 1261858 1261855, overlap 1261857 TCTCTTGCAATAGTA TTTTATCGCAATAACTA TTA TTGTTATTGCGATAAAA CTTTTAGAAGGAGTT amiF 1261913 - 1262917 + | formamidase TERM 1114 1262937 - 1262960 + T 81 -9.7 -3.40836 | TAACCTTGTATTTTG CTAGAACCT GTTTAA AGGTTCTAG TTCCCTTATTTTTAA HPSH_06410 1263206 - 1263105 - | hypothetical protein HPSH_06415 1263897 - 1263325 - | Maf-like protein alaS 1266442 - 1263899 - | alanyl-tRNA synthetase TERM 1115 1264820 - 1264837 + g 89 -5.5 -5.4477 | overlap 1264809 1264821 CTCATCGCTCACTTG TGCGATC ACTT GATCGCC TTTTTTTAGCGCTTT TERM 1116 1264821 - 1264836 + g 79 -9 -3.85235 | overlap 1264809 1264820 TCATCGCTCACTTGT GCGATC ACTT GATCGC CTTTTTTTAGCGCTT TERM 1117 1265128 - 1265147 + g 74 -4.3 -4.96468 | opp_overlap 1265128 1265131, overlap 1265123 CATAAGCGTTTAAAA TAGCGCT AAAATC AGCGTTA TTTTGTTTGCCTTTC TERM 1118 1266435 - 1266425 - G 75 -5.4 -4.7657 | opp_overlap 1266433 GAAAAATTGTAAAAA TTCG TTG CGAA TATCCATGGGTATTC HPSH_06425 1266561 - 1266791 + | hypothetical protein TERM 1119 1266817 - 1266847 + T 93 -10.6 -3.99898 | opp_overlap 1266817 1266824 TCTTGGTGAAAACAC GCTAAAACGCTTTT TAA AAGGGTGTTTTAGC TTTATCGCTTGGTTA HPSH_06430 1267137 - 1267051 - | hypothetical protein HPSH_06435 1267310 - 1267137 - | hypothetical protein TERM 1120 1267293 - 1267279 - G 74 -6.4 -4.4448 | opp_overlap 1267279 1267280 AAAGCTTTAAAGAAA TCCCCT AAA AAGGGA GTTTTACAAAGAGCC HPSH_06440 1269428 - 1267314 - | outer membrane protein (omp19) TERM 1121 1267443 - 1267457 + g 78 -2.8 -5.45652 | overlap 1267441 AATGCCATGCTGAGC GGCA TGATCGC TGCC TTTTTTCTTAGACCT TERM 1122 1269689 - 1269667 - R 75 -9.9 -2.70932 | opp_overlap 1269666 1269667 TTTTGTCGTGAAGTA CCCAAACGC TAAAG GCATTTGGG ATTTCTGCTTGGGTG TERM 1123 1269901 - 1269889 - R 93 -10.5 -4.04415 | opp_overlap 1269888 TTAAATAAGATTAAA GGGGC CAT GCCCC CTATTAGCCCTAATC rpsR 1270180 - 1269923 - | 30S ribosomal protein S18 HPSH_06450 1270748 - 1270203 - | single-strand DNA-binding protein rpsF 1271186 - 1270758 - | 30S ribosomal protein S6 HPSH_06460 1272351 - 1271329 - | DNA polymerase III subunit delta HPSH_06465 1274275 - 1272341 - | 3'-5' exoribonuclease R TERM 1124 1273382 - 1273396 + g 82 -8.6 -4.26076 | opp_overlap 1273381 ATACACTAAAGCCAG GCGTTT TTC AAACGC TTTTAGTGAGCATGC aroE 1275066 - 1274275 - | shikimate 5-dehydrogenase HPSH_06475 1275652 - 1275074 - | hypothetical protein TERM 1125 1275580 - 1275568 - G 79 -9.1 -3.88001 | overlap 1275564 TCGCATAAAAACCAA GCGCA GCA TGCGC TAAAGCATACAACAA TERM 1126 1276468 - 1276494 + r 78 -2.2 -5.61824 | overlap 1276467 1276470 GAGAAGGTAGCGCTC CCCTATGGGCTT GTC AAAACCATAGAG TTTTTTTAAATTTTC HPSH_06490 1278497 - 1276716 - | hypothetical protein TERM 1127 1276848 - 1276837 - G 73 -2.2 -5.30616 | TTAGGCAAATAAAAA TGCG GTAT CACA TAAAACCCCCACAAC TERM 1128 1277597 - 1277608 + g 70 -5.8 -4.42619 | AGAAAAACCCTTGCA TGCC GCTT GGCA TTTTATGGGCTATTA TERM 1129 1277738 - 1277728 - G 84 -6.8 -5.00616 | GCTCCGCTTAAAAAA GCCT GTA AGGC GACGGTTTCGTCTTT TERM 1130 1278456 - 1278442 - G 79 -8.6 -4.05446 | TCGCCCAAGTATAAA TAAGGC GTA GCCTTA AGGAAACAAAACACC HPSH_06495 1279478 - 1278498 - | tryptophanyl-tRNA synthetase TERM 1131 1278790 - 1278812 + g 83 -3.2 -5.56112 | opp_overlap 1278791, overlap 1278791 TCATCAAATGCAATA ACGCCCACAG AAT CAGTGGTCGC TTTTTTGATTTTTCT HPSH_06500 1280272 - 1279550 - | biotin synthesis protein (bioC) secG 1280392 - 1280991 + | preprotein translocase subunit SecG frr 1280991 - 1281548 + | ribosome recycling factor TERM 1132 1282031 - 1282020 - g 76 -7.2 -4.18494 | CATTCTCATTTAAAA GCCC AAGA GGGC GCGTGTTTGCCTAGC pyrE 1281552 - 1282157 + | orotate phosphoribosyltransferase TERM 1133 1282219 - 1282205 - g 84 -10 -3.89881 | opp_overlap 1282203 1282201 1282201 1282205 AGCAAGCGTTAGAAA GCCCTT TAA AAGGGC TGTATCTCTCTTTGC TERM 1134 1282205 - 1282219 + G 75 -10 -3.13082 | opp_overlap 1282205, overlap 1282203 1282201 1282201 AGCAAGCGTTAGAAA GCCCTT TAA AAGGGC TGTATCTCTCTTTGC TERM 1135 1282248 - 1282258 + G 74 -4 -5.06735 | GCGCTTAAAGGCCTT TATC ACC GATA TTTTTATGATTTATA HPSH_06520 1282147 - 1282611 + | conserved hypothetical mitochondrial protein-like protein 4 HPSH_06525 1282608 - 1283297 + | hypothetical protein HPSH_06530 1283399 - 1283800 + | NADH dehydrogenase subunit A HPSH_06535 1283800 - 1284279 + | NADH dehydrogenase subunit B TERM 1136 1284787 - 1284799 + G 85 -9.1 -4.26351 | opp_overlap 1284765 TCATGCCGCATGATT GGGTG GGC CACCC TTTATTGCGTTCCTA HPSH_06540 1284279 - 1285076 + | NADH dehydrogenase subunit C TERM 1137 1286121 - 1286139 + G 80 -4.6 -5.31456 | opp_overlap 1286121 TGCCCCCACAGAAAG CCCTAA AGGGGAA TTAGGG TTTTTTATCCATTCA HPSH_06545 1285078 - 1286307 + | NADH dehydrogenase subunit D HPSH_06550 1286304 - 1286534 + | NADH-ubiquinone oxidoreductase chain E TERM 1138 1287209 - 1287219 + G 73 -6.8 -4.18197 | opp_overlap 1287209 1287208, overlap 1287197 ACAGCCTTAAAAGAG GGCA TTT TGCC TTTTGAATCGCAACT HPSH_06555 1286531 - 1287523 + | NADH-ubiquinone oxidoreductase chain F TERM 1139 1288931 - 1288918 - g 76 -2.4 -5.52909 | GAAGAGCGAAAAAAA GCTT TAGAAC AAGC CGAGCAAGGGTGCAA HPSH_06560 1287520 - 1290054 + | NADH dehydrogenase subunit G TERM 1140 1290795 - 1290808 + G 80 -2.3 -5.56263 | TTTTTAGCGGAATAC GCGCA TTTA TTCGC TTTTTCTTTTGTGAT HPSH_06565 1290051 - 1291040 + | NADH dehydrogenase subunit H TERM 1141 1291554 - 1291566 + G 77 -4.8 -4.88222 | AGACGCTAAAAACTG CTCG CATGC CGAG TTTTTAGGTTTTGGT HPSH_06570 1291051 - 1291713 + | NADH dehydrogenase subunit I TERM 1142 1291804 - 1291820 + G 75 -2.9 -5.29846 | overlap 1291805 1291807 CTATGCCATTACCGC TCTTGCT AGC AGCATGG TTTTTATTTCCGCTT HPSH_06575 1291706 - 1292254 + | NADH dehydrogenase subunit J HPSH_06580 1292251 - 1292553 + | NADH dehydrogenase subunit K TERM 1143 1293953 - 1293971 + G 82 -3.8 -5.40004 | overlap 1293943 TTTAGCGGTCATTGC CGGGTTTT TTG AAGAGCCG TTTTTTCATTTCATC HPSH_06585 1292556 - 1294394 + | NADH dehydrogenase subunit L TERM 1144 1294456 - 1294466 + G 71 -6.8 -4.06687 | TCCCCATGCTGAGCG CGCT ATT AGCG TTCTTTATGAGCGAT TERM 1145 1294500 - 1294513 + G 71 -6.7 -3.97659 | GCGAGTAGGGCGTAT GCGAT TGTC ATCGC TTTGATTGAATTGTT TERM 1146 1294631 - 1294652 + G 78 -3.7 -5.19251 | gap 1 CGTGAATTACCATGT GGGCGTTGAT GGC ATCG-CGCTC TTTTTGTTGCTCTTA HPSH_06590 1294398 - 1295936 + | NADH dehydrogenase subunit M TERM 1147 1296558 - 1296570 + G 71 -4.1 -4.8622 | opp_overlap 1296544 CCCCATGCTCTTTGC GATGG GCG CTATC TTTTTGATTGGAGCG TERM 1148 1297025 - 1296998 - g 72 -3.4 -5.03747 | gap 1, opp_overlap 1297000 1297001, overlap 1297000 1297001 AAAGCCGGGAAAAAA CATGGGATGAACG CTA CGATCACCCC-TA TTCTAAATTCAACGG TERM 1149 1297024 - 1297000 - g 71 -6.3 -4.13963 | opp_overlap 1297000 1297001, overlap 1296998 1297001 AGCCGGGAAAAAACA TGGGATGAACG CTA CGATCACCCCT ATTCTAAATTCAACG TERM 1150 1297023 - 1297001 - g 72 -9.8 -3.07655 | opp_overlap 1297001 1297000, overlap 1297000 1296998 GCCGGGAAAAAACAT GGGATGAACG CTA CGATCACCCC TATTCTAAATTCAAC TERM 1151 1297203 - 1297215 + G 90 -9.1 -5.011 | opp_overlap 1297202 GATGTTAGTTAATAG CGCAG TGG CTGCG TTTTATTATTTCCGT HPSH_06595 1295923 - 1297401 + | NADH dehydrogenase subunit N TERM 1152 1297569 - 1297559 - g 72 -4.6 -4.76041 | TATACTCATGAAAAA CCAC CAA GCGG GATTGAAGCGTCTTT TERM 1153 1298377 - 1298391 + G 74 -5 -4.82901 | GAGCAACGCTAGCAT GCTTTT TAA AGAAGC TTTTTCTAACGCCAA HPSH_06600 1297391 - 1299802 + | paralysed flagella protein TERM 1154 1300357 - 1300371 + G 79 -8.6 -4.12942 | overlap 1300359 1300360 ATGGCGTGGGAGCGT TAGGCT TAG AGCCTA TTTTAAAGGCTTTAA TERM 1155 1300360 - 1300388 + G 77 -11.1 -2.79823 | overlap 1300357 1300359 GCGTGGGAGCGTTAG GCTTAGAGCCTAT TTT AAAGGCTTTAAGC ATTGATTTTAGCAGC TERM 1156 1300942 - 1300930 - g 89 -5.5 -5.4505 | CGCCTGAAGAAAAAA TCGCC GTG AGCGA AGAAGAAAAATTTGA HPSH_06605 1299804 - 1301180 + | phosphomannomutase HPSH_06610 1301291 - 1301599 + | hypothetical protein trpA 1302618 - 1301830 - | tryptophan synthase subunit alpha HPSH_06620 1303796 - 1302615 - | tryptophan synthase subunit beta HPSH_06625 1305156 - 1303798 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase trpD 1306156 - 1305149 - | anthranilate phosphoribosyltransferase TERM 1157 1305471 - 1305483 + g 70 -7.7 -3.76224 | CACGCATGCGTAGTA TCGTG CAA CACGA TTTCATCCGTCCCCC HPSH_06635 1306737 - 1306153 - | anthranilate synthase component II HPSH_06640 1308371 - 1306734 - | anthranilate synthase component I TERM 1158 1307821 - 1307809 - GR 76 -2 -5.41746 | AAGTCTTCAAAAAAA TTGA GCATT TCAA AAGAAAAAACGCCCG TERM 1159 1308275 - 1308261 - GR 77 -5 -4.87389 | CACGCTAAAAATAAA CTTGCA TTC TACAAG AAATAGATAAATGGG TERM 1160 1308328 - 1308352 + gr 75 -8 -3.74872 | TGCTTGTTGCCGTTA TCTTTCTTGT GTGTG GCAAGAAAGA TTTGGTGCGATAAAT HPSH_06645 1309383 - 1308325 - | hypothetical protein TERM 1161 1308373 - 1308387 + gr 70 -4.2 -4.71061 | opp_overlap 1308372, overlap 1308372 TGCGATAAATTCAAG GATGGT TTC ACCCTC TTTTTCAATGTCAAT HPSH_06650 1310143 - 1309451 - | conserved hypothetical secreted protein TERM 1162 1309757 - 1309772 + g 82 -4 -5.47218 | ACTTTTGAGCGTTTT TAAGGT GAAT GCCTTA TTTTTTTGCGTGCGG HPSH_06655 1310313 - 1310861 + | conserved hypothetical secreted protein HPSH_06660 1310973 - 1310836 - | hypothetical protein TERM 1163 1310868 - 1310899 + g 93 -9.6 -4.90302 | overlap 1310869 1310870 GCTCAATAAACTTTT TTTGCAAGAAACAA TTTT TTGTTTCTTGCAGC TTTCTTTTCTTAATA TERM 1164 1310869 - 1310898 + g 95 -13.1 -3.52554 | overlap 1310868 1310870 CTCAATAAACTTTTT TTGCAAGAAACAA TTTT TTGTTTCTTGCAG CTTTCTTTTCTTAAT TERM 1165 1310870 - 1310897 + g 93 -14.4 -2.69906 | overlap 1310869 1310868 TCAATAAACTTTTTT TGCAAGAAACAA TTTT TTGTTTCTTGCA GCTTTCTTTTCTTAA HPSH_06665 1311446 - 1312102 + | putative transcriptional regulator TERM 1166 1312379 - 1312391 + G 74 -6.3 -4.39414 | opp_overlap 1312379 1312378 TTTTGCCGGAGAAAG GCAAA CGA TTTGC TTTGTGTTTGGTCTT HPSH_06670 1312224 - 1312886 + | nicotinamide mononucleotide transporter TERM 1167 1312956 - 1312991 + G 85 -12.6 -3.17075 | ACGCTCCCTTTTTAA TCGCATGCGATGGGGC TGTT GCTTCATTGCATGCGC TTCAATTCAAACCCA HPSH_06675 1312874 - 1313488 + | hypothetical protein HPSH_06680 1313800 - 1313952 + | hypothetical protein rplQ 1314346 - 1313996 - | 50S ribosomal protein L17 HPSH_06690 1315380 - 1314346 - | DNA-directed RNA polymerase subunit alpha rpsD 1316018 - 1315392 - | 30S ribosomal protein S4 HPSH_06700 1316423 - 1316028 - | 30S ribosomal protein S11 rpsM 1316808 - 1316446 - | 30S ribosomal protein S13 HPSH_06710 1316925 - 1316812 - | hypothetical protein infA 1317222 - 1317004 - | translation initiation factor IF-1 TERM 1168 1317180 - 1317161 - G 77 -7.8 -4.14511 | opp_overlap 1317167 AATTCCACCTTAAAA GTGGCGTT AGGC AACGCCTC AATCACTTTCCCATC HPSH_06720 1317983 - 1317222 - | methionine aminopeptidase TERM 1169 1317890 - 1317872 - G 73 -7.4 -4.11692 | opp_overlap 1317872 TATCCAGCTCTAAAA GTGAAACC CCA GGCCTCAC TTCTCGCTCTAAAAG secY 1319245 - 1317983 - | preprotein translocase subunit SecY rplO 1319684 - 1319283 - | 50S ribosomal protein L15 rpsE 1320163 - 1319702 - | 30S ribosomal protein S5 rplR 1320516 - 1320160 - | 50S ribosomal protein L18 rplF 1321066 - 1320530 - | 50S ribosomal protein L6 rpsH 1321472 - 1321077 - | 30S ribosomal protein S8 rpsN 1321667 - 1321482 - | 30S ribosomal protein S14 rplE 1322222 - 1321677 - | 50S ribosomal protein L5 rplX 1322456 - 1322235 - | 50S ribosomal protein L24 rplN 1322824 - 1322456 - | 50S ribosomal protein L14 rpsQ 1323087 - 1322827 - | 30S ribosomal protein S17 HPSH_06780 1323301 - 1323101 - | 50S ribosomal protein L29 rplP 1323713 - 1323288 - | 50S ribosomal protein L16 rpsC 1324420 - 1323716 - | 30S ribosomal protein S3 rplV 1324792 - 1324424 - | 50S ribosomal protein L22 rpsS 1325083 - 1324802 - | 30S ribosomal protein S19 rplB 1325923 - 1325087 - | 50S ribosomal protein L2 TERM 1170 1325122 - 1325134 + g 87 -3.3 -5.73978 | TTCTGGAAATGATGA GCTTG TCG CTAGC TTTTTTCTTTCTCGT rplW 1326220 - 1325939 - | 50S ribosomal protein L23 rplD 1326871 - 1326224 - | 50S ribosomal protein L4 rplC 1327481 - 1326906 - | 50S ribosomal protein L3 rpsJ 1327832 - 1327518 - | 30S ribosomal protein S10 TERM 1171 1327998 - 1327988 - g 86 -2.4 -5.88197 | GGAAATATAAAAAAA TGCG CTA CGCT TATCTTAATCCAATC TERM 1172 1328884 - 1328899 + G 86 -7.6 -5.10767 | opp_overlap 1328871 1328864 1328895 AATCATGAGCTTCAC TCCCAT GATA ATGGGA TTTTTATCTTGCATA HPSH_06830 1327987 - 1329120 + | conserved hypothetical ATP-binding protein HPSH_06835 1329340 - 1329921 + | hypothetical protein HPSH_06840 1330509 - 1329895 - | ribonuclease HII HPSH_06845 1330770 - 1330540 - | hypothetical protein fumC 1332184 - 1330793 - | fumarate hydratase HPSH_06855 1332359 - 1332736 + | hypothetical protein HPSH_06860 1332792 - 1333979 + | hypothetical protein HPSH_06865 1333976 - 1334983 + | cation efflux system protein (czcA) TERM 1173 1335096 - 1335081 - g 81 -6.8 -4.82901 | opp_overlap 1335069 1335081 TGTGGGCGATAAAAA GCGTCC GTTT AGACGC TTTGCCGGATTTAAG TERM 1174 1337731 - 1337744 + G 75 -8.1 -4.11216 | CGTGGCGGCGTTAGT GGGCT TTTT AGCCC TTTTAGGGGTAGCGA TERM 1175 1338012 - 1338026 + G 87 -6.4 -5.20333 | opp_overlap 1338012 GAGGCATGATAAGCA GCGTTG TTT TAACGC TTTTTATTATCCCTA HPSH_06870 1334984 - 1338097 + | cation efflux system protein (czcA) HPSH_06875 1338441 - 1338094 - | hypothetical protein HPSH_06880 1339121 - 1338435 - | branched-chain amino acid transport protein HPSH_06885 1340241 - 1339132 - | co-chaperone and heat shock protein TERM 1176 1340014 - 1340028 + g 83 -6.4 -5.05782 | overlap 1340005 GCTCTGGCTCGCACC GGCTTG GTT TAAGCC TTTTTTACCATACCT TERM 1177 1340585 - 1340595 + G 76 -2.4 -5.40072 | AACAGCACCCTAAAT AGCC AGA GGCG TTTTTTTAACGCCAG TERM 1178 1341131 - 1341117 - g 75 -5.7 -4.72486 | TAGAAACTTTAAAAA CGCAT TTTTT ATGCG ATAAAGAAAATCTGA TERM 1179 1341198 - 1341184 - g 77 -7.8 -4.28361 | CCAACGCTACCAAAA CGCCCT CAT AGAGCG AGATAAAGAACTAAA HPSH_06890 1340420 - 1341496 + | hypothetical protein TERM 1180 1341576 - 1341554 - f 86 -10.7 -3.17219 | overlap 1341572 CATAACTTCTAGGAA GGATCTCTT TCATT AAGAGATCC CACGACCCTTGTGAA HPSH_06895 1341698 - 1341811 + | hypothetical protein HPSH_06900 1342021 - 1342386 + | hypothetical protein trmU 1343475 - 1342447 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1181 1342631 - 1342644 + g 71 -3.9 -4.88293 | opp_overlap 1342631 TCGCCATTTTTAAAA TCTTT CGTT AAAGA TTTGTTTTTAGCCTT TERM 1182 1343323 - 1343335 + g 79 -5.5 -4.84527 | GCCTAAAAACTCGCA CGCTT TTT GAGCG TTTTTAATGTATAAA HPSH_06910 1343616 - 1344377 + | hypothetical protein HPSH_06915 1344889 - 1344374 - | hypothetical protein HPSH_06920 1345328 - 1344882 - | nickel responsive regulator TERM 1183 1345726 - 1345738 + G 85 -5.5 -5.24449 | overlap 1345727 TTGTTTTTGCGGTGC TTGGC GTG GCCAG TTTTTTAGCTTTGTG HPSH_06925 1345665 - 1346102 + | biopolymer transport protein (exbB) HPSH_06930 1346099 - 1346488 + | biopolymer transport protein TERM 1184 1346524 - 1346540 + GT 85 -9.5 -3.90874 | TTTTAATCTCTTTTG CCCTATA CGC TATAGGG TTTGGCTATTTTTTA HPSH_06935 1346454 - 1347308 + | siderophore-mediated iron transport protein (tonB) TERM 1185 1347303 - 1347314 + T 70 -4.4 -4.64861 | opp_overlap 1347303 TATAGTTTGAAAGAA GACT AGCC AGTC TTTCTTTTGAAGGCG TERM 1186 1347706 - 1347693 - T 85 -4.5 -5.63236 | AGGCAAAAAGAAAAA CAGCG ATCA CACTG CACAGCATAGCATGG HPSH_06950 1348701 - 1347973 - | hypothetical protein TERM 1187 1348312 - 1348332 + g 73 -8.4 -3.67971 | opp_overlap 1348311 TTCTATTAAGATGAT GAAAAAGC CAAAC GCTTTTTC TTGGTGTTTTTCTTT TERM 1188 1348702 - 1348723 + r 89 -8.8 -4.62069 | opp_overlap 1348706, overlap 1348706 GGACAAAAATTCCAT GAAAGGCT ACAACC AGCCTTTC TTTTTAAAATAAACC TERM 1189 1348706 - 1348719 + r 70 -3.8 -4.87389 | opp_overlap 1348706, overlap 1348702 AAAAATTCCATGAAA GGCT ACAACC AGCC TTTCTTTTTAAAATA HPSH_06955 1349664 - 1348708 - | magnesium and cobalt transport protein pgk 1350888 - 1349680 - | phosphoglycerate kinase TERM 1190 1350607 - 1350597 - G 76 -3.2 -5.252 | opp_overlap 1350606 TATTTTGAGAAAAAA CCAC TTC ATGG TTTAAGAGCCTTTCA HPSH_06965 1351896 - 1350904 - | glyceraldehyde-3-phosphate dehydrogenase HPSH_06970 1352686 - 1351985 - | uracil-DNA glycosylase TERM 1191 1352081 - 1352066 - G 79 -6.8 -4.58395 | overlap 1352067 1352068 CCCACTCCCTAAAAA CCCCCT AGAT AAGGGG CTAGGGTGAGGGGCG TERM 1192 1352224 - 1352255 + g 91 -6.4 -5.41746 | GATCGCTAAAAGCTT CCCAGCCGATGCGT TTGT GCGAAGCGGCTTGG TTTTTTTCCACGCTT HPSH_06975 1353405 - 1352683 - | 1-acyl-glycerol-3-phosphate acyltransferase (plsC) TERM 1193 1353291 - 1353262 - G 72 -3.3 -5.09426 | opp_overlap 1353262, overlap 1353269 1353272 GGTAAGGGGAAAAAA GCACGAACAAGCC CTAC GGCTAGAGCGGGC GTTATTGTTTTTGCG HPSH_06980 1354555 - 1353392 - | hypothetical protein TERM 1194 1353688 - 1353674 - G 75 -2.7 -5.19251 | CAACACCAAGAAAAA CACGC ACAAA GCGAG CAGCGCCACATTAGA TERM 1195 1354083 - 1354099 + g 75 -8.1 -4.13014 | TTTTTGGATAAATCC GTTACTT GCA AAGTAAC TTTTGGGGCTATGGA TERM 1196 1354544 - 1354564 + g 70 -5.5 -4.45068 | opp_overlap 1354533 1354544 TAACGATTTTTCAAA TAAAAACCC CAT GAGTTTTTA TTTCTTCTTAGGCGT HPSH_06985 1355926 - 1354562 - | protease TERM 1197 1354668 - 1354678 + g 74 -4.6 -4.90136 | TCGTTGATCATTTTA GGGG TAA CCTC TTTTTCCTCTTCGTT TERM 1198 1354951 - 1354962 + g 76 -4.4 -5.02074 | GCATCTGCACGCTTC CCTT ACCA AAGG TTTTTTCACCGATAA TERM 1199 1355434 - 1355484 + g 79 -8.4 -4.12315 | gap 1, overlap 1355477 GGATAGGGGTCTTTG GCTTGCCGCGCATGAG-ATTGAT CGCATC ATCAATGCTCATGCTCAGCGTGC TTTCGTTGTTGATTT TERM 1200 1355832 - 1355846 + g 81 -2.7 -5.64006 | overlap 1355833 TGCGGATCTTCTTTA ACCGG CTTGA CCGGC TTTTTTTCCTTAACT HPSH_06990 1356270 - 1356037 - | adenine specific DNA methyltransferase TERM 1201 1356206 - 1356192 - G 70 -5.7 -4.36206 | ATAAGGCAGAATAAA GGGAA AGCTG TTCCC CCACCTCTGCGCTAG HPSH_06995 1357228 - 1356335 - | hypothetical protein TERM 1202 1356965 - 1356984 + g 79 -3.6 -5.47218 | overlap 1356966 TTCCATTTTTTCTTT ATCCTTAT TGTA ATAAGGAA TTTTTTTAGATAAAG TERM 1203 1356966 - 1356983 + g 71 -7.1 -3.87608 | overlap 1356965 TCCATTTTTTCTTTA TCCTTAT TGTA ATAAGGA ATTTTTTTAGATAAA HPSH_07000 1358307 - 1357228 - | adenine specific DNA methyltransferase (HINFIM) TERM 1204 1357306 - 1357322 + g 88 -8.7 -4.6759 | opp_overlap 1357305 CGCATAAAAAAATTT CCAGCCA TTA TGGTTGG TTTTATTCAAATATT HPSH_07005 1358654 - 1358427 - | adenine specific DNA methyltransferase TERM 1205 1358590 - 1358576 - G 70 -5.7 -4.35604 | GCAAGGCAGAATAAA GGGAA AGCTG TTCCC CCACCTCCGGAAGAG HPSH_07010 1361935 - 1358699 - | hypothetical protein TERM 1206 1360505 - 1360525 + g 78 -2.6 -5.46129 | AGGGGGATTACCGGT GATGATAA GGATA TTTTCATC TTTTTTAATTTCTTG TERM 1207 1361185 - 1361204 + g 71 -5 -4.59773 | TTAAAAAATCCGCCA TTTCTCTG ATCA CAGCGAAA TTTTTAGGGATGGAA HPSH_07015 1362780 - 1361959 - | nicotinate-nucleotide pyrophosphorylase HPSH_07020 1363790 - 1362780 - | quinolinate synthetase TERM 1208 1363317 - 1363335 + g 74 -4 -5.07652 | CAAGCATTTATCCGG TAGAAAAA AGA TTTTTTTA TTTTGTTTTAAAGCG TERM 1209 1363746 - 1363730 - G 71 -6.5 -4.29396 | AATGAGCCACTAAAA GCGCG TCTAAAT CGCGC AATAATTCCACAATA HPSH_07025 1364583 - 1363780 - | phosphatidylserine decarboxylase HPSH_07030 1365083 - 1364580 - | hypothetical protein HPSH_07035 1365590 - 1365096 - | hypothetical protein ubiA 1366467 - 1365583 - | prenyltransferase TERM 1210 1365975 - 1365955 - G 80 -6.2 -4.81249 | CCCTAAAGCCAAAAA GACATTCC ATAAA GGAATATC CCCTAAAACCGCCAC HPSH_07045 1367809 - 1366496 - | competence locus E HPSH_07050 1369272 - 1367806 - | replicative DNA helicase TERM 1211 1368791 - 1368804 + g 71 -6.7 -4.05208 | ACAATAAGATCCATC GTGCT TTCA AGCAC TTCTTTAATATCCCT HPSH_07055 1370677 - 1369283 - | hypothetical protein HPSH_07060 1371813 - 1370680 - | signal-transducing protein, histidine kinase TERM 1212 1371064 - 1371079 + g 74 -4.6 -4.96388 | overlap 1371066 GTGGTAGTCTATCAT CTCGCT AAAA AGCGTG TTTTCTTTGGTAATT TERM 1213 1371819 - 1371840 + r 93 -5.9 -5.88471 | opp_overlap 1371819 1371818 AAGAGCCCAAATAAG TCCCTAAAA AGAG TTTAAGGGA TTTTTTTTCATAGTG HPSH_07065 1372489 - 1371848 - | putative transcriptional regulator HPSH_07070 1373635 - 1372577 - | type IIS restriction enzyme R protein (MBOIIR) HPSH_07075 1373810 - 1374652 + | type II restriction endonuclease HPSH_07080 1374652 - 1375545 + | adenine-specific DNA metylase TERM 1214 1376818 - 1376831 + GF 71 -6.7 -4.09685 | GGCTAACCGCTTGGA GCTTG CGCA CAAGC TTTTGAACGATAAAG HPSH_07085 1375517 - 1376959 + | Adenine-specific DNA methylase HPSH_07090 1376917 - 1377993 + | adenine-specific DNA methylase TERM 1215 1378953 - 1378938 - g 71 -4.8 -4.64495 | ATTGAAGAAAAACAA CTTAAA CGCT TTTAAG GAATCAAAAGATTTA TERM 1216 1379991 - 1379976 - g 79 -3.4 -5.49729 | opp_overlap 1379986 AATGAGCGAAAAAAA TTTTAA GGAT TTAAAA GAGTATTTTAATTTG TERM 1217 1380346 - 1380332 - g 85 -5.6 -5.29445 | CTCTAAGAATAAAAA TCGCGC AAG GCGAGA TCGATCCTTATGATG TERM 1218 1380391 - 1380381 - g 74 -4 -5.15682 | AAAACACAAACAAAA CAAA ACA TTTG AAGTTGATGACGCCG HPSH_07095 1378003 - 1380915 + | type III restriction enzyme R protein HPSH_07100 1381711 - 1380965 - | rod shape-determining protein TERM 1219 1381012 - 1381025 + g 79 -6.7 -4.58395 | opp_overlap 1381004 1381023 TTAAAAGTTTAGCGT CGCTT AAAA AAGCG TTTTTCAACACTGCG TERM 1220 1381036 - 1381023 - G 70 -3.1 -5.00616 | opp_overlap 1381012 GCGTCGCTTAAAAAA GCGTT TTTC AACAC TGCGCTTTTATAAGT HPSH_07105 1382758 - 1381715 - | rod shape-determining protein TERM 1221 1382232 - 1382209 - G 73 -8.2 -3.86822 | TAATGCTTTTAGAAA TGACTAGCCC CCCT AGGCTAATCA CGCCAATTTCAGTCG TERM 1222 1382358 - 1382370 + g 70 -9.1 -3.24411 | overlap 1382356 1382357 ACTTCTCTAGCCCCC GCGCT TAA AGCGC TCTCTTTAACCGCAT clpX 1384147 - 1382801 - | ATP-dependent protease ATP-binding subunit TERM 1223 1383202 - 1383218 + g 73 -6.6 -4.23218 | opp_overlap 1383201 1383202 GGGTTTGGACTAAAT GCAAGA TCGCT TCTTGC TCTTTTTTGCTCATT HPSH_07115 1384961 - 1384149 - | UDP-N-acetylglucosamine acyltransferase fabZ 1385443 - 1384964 - | (3R)-hydroxymyristoyl-ACP dehydratase HPSH_07125 1386015 - 1385626 - | flagellar assembly protein FliW HPSH_07130 1386232 - 1386378 + | hypothetical protein TERM 1224 1386389 - 1386376 - f 84 -3.9 -5.66338 | AAAGATAAGAAAAAA TAACT CATG AGTTA TTCAAAAATTTAATT TERM 1225 1386548 - 1386565 + G 77 -4.9 -4.84363 | overlap 1386533 TCTTTTGGTATCAAG GGATTTT GAGA GAAATCC TTTTTGCTAATTTAG TERM 1226 1386992 - 1386967 - g 76 -3.1 -5.25803 | opp_overlap 1386983 AATGTCTATAAAAAA CGCCACAAGCC TGAG GGCGTGAAACG CTATTTAGAGAGAAT HPSH_07135 1386421 - 1387083 + | competence lipoprotein TERM 1227 1389516 - 1389498 - g 71 -7.5 -3.96337 | TCAAAAATTACGAAA GGGATTT AGATG AAATCCC TGCTGAAGTGCGAGA HPSH_07140 1387124 - 1389592 + | ATP-dependent protease HPSH_07145 1389601 - 1390428 + | prephenate dehydrogenase HPSH_07150 1391562 - 1390714 - | putative endonuclease TERM 1228 1390878 - 1390888 + g 73 -6.8 -4.29738 | opp_overlap 1390877 GGATGTAAAAACATT CGCT TTT AGCG TTTTCATAGCTATCG HPSH_07155 1393405 - 1391687 - | putative type III restriction enzyme M protein TERM 1229 1391919 - 1391943 + g 72 -3.5 -5.08015 | AAGATTTTTAGGCAT TCGTTTGCGCT TTT AGCGTTAAGGA TTTGTTTTTTAACTT TERM 1230 1392405 - 1392424 + g 74 -3.7 -5.01732 | overlap 1392401 AAAAAATCATCTACT TTTTCTT GTGGAA AAGAAAA TTTTTTAAAAGCATT TERM 1231 1393657 - 1393647 - H 71 -5.4 -4.56597 | GCGTTTGGGCAAAAA GGAT AAA ATCC GGCTCAAAACCTTGC HPSH_07170 1396155 - 1397003 + | biotin synthase HPSH_07175 1397003 - 1397881 + | putative ribonuclease N TERM 1232 1398746 - 1398728 - T 75 -8.2 -3.73914 | ATGAGTGATCAAGAA TCTATACC AAC GGCATAGA GAGCTTTTGGAGCTT TERM 1233 1399234 - 1399186 - T 90 -12 -3.47349 | opp_overlap 1399186 1399187 1399232, overlap 1399187 1399192 TCTCTAAAGGCACAA GGAAAAGGGAGCTAAAGATAAA ACGCA TTTACCCTTAACTCCCCTTTCT CTTTATAGGGAGCTT TERM 1234 1399233 - 1399187 - T 100 -15.5 -2.68088 | opp_overlap 1399187 1399186 1399232, overlap 1399186 1399192 CTCTAAAGGCACAAG GAAAAGGGAGCTAAAGATAAA ACGCA TTTACCCTTAACTCCCCTTTC TCTTTATAGGGAGCT TERM 1235 1399228 - 1399192 - T 100 -11.8 -4.50661 | opp_overlap 1399187 1399186, overlap 1399187 1399186 AAGGCACAAGGAAAA GGGAGCTAAAGATAAA ACGCA TTTACCCTTAACTCCC CTTTCTCTTTATAGG TERM 1236 1402031 - 1402048 + T 83 -9.9 -3.76413 | TTGCAGTCCTCAACC CCGAATG CAAG CATTCGG TTTGCCCTTTTCCCC HPSH_07180 1402729 - 1402463 - | hypothetical protein TERM 1237 1402586 - 1402604 + g 74 -4.6 -4.84529 | opp_overlap 1402586, overlap 1402578 TTTATCAGCTAATGA GCTTTTTA TAT TCAAAAGC TTTTTGGCTTTATAA TERM 1238 1402997 - 1402977 - R 74 -9.1 -3.07051 | opp_overlap 1402977, overlap 1402974 1402992 GCAAGAAGTAAAGTA GGATAGATT TTA AATCTACCC TTATGATAGCCAACA TERM 1239 1403045 - 1403062 + r 76 -2.7 -5.52909 | GCTAACAATTCTTGC TTAAAGC CCAT GCTTTTA TTTTTTTGCATATTC HPSH_07185 1404400 - 1403060 - | hypothetical protein TERM 1240 1403979 - 1403965 - G 74 -5 -4.78848 | TTGTTAAATACAAAA CACAAA TAT CTTGTG CATCCTTAACTTTAT HPSH_07190 1404778 - 1404416 - | hypothetical protein HPSH_07195 1405491 - 1404799 - | hypothetical protein TERM 1241 1405760 - 1405774 + r 79 -4.2 -5.33026 | ATTTTTAGGTCATTT CGCATT CAA AAGGCG TTTTTCTTTAAATTC HPSH_07200 1406194 - 1405754 - | 7-cyano-7-deazaguanine reductase HPSH_07205 1406253 - 1406594 + | hypothetical protein miaA 1406665 - 1407495 + | tRNA delta(2)-isopentenylpyrophosphate transferase HPSH_07215 1407500 - 1408603 + | lipopolysaccharide 1,2-glucosyltransferase TERM 1242 1409871 - 1409885 + T 93 -8.6 -4.6575 | opp_overlap 1409870 CAGGTGCTCTAAAGC GGGATT AGA AATCCC TTTTATGATTTATGT murB 1410939 - 1410160 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1243 1410356 - 1410376 + g 77 -6.1 -4.57073 | CCCTCTAAAAGCCTG CCTGCATAA TCG TTAGGCGGG TTTTTGAAACAGCTC fliQ 1411194 - 1410943 - | flagellar biosynthesis protein FliQ fliI 1412524 - 1411220 - | flagellum-specific ATP synthase TERM 1244 1411893 - 1411910 + g 70 -2.8 -5.04597 | ACCAACACGCAAGAG CTTAAA TCCCCT TTTAAG TTTTTCTCTATAAAT HPSH_07250 1413439 - 1412525 - | type IV secretion system ATPase TERM 1245 1412658 - 1412646 - G 73 -7.7 -3.96216 | opp_overlap 1412643 1412646 TCCTTATCCAAAGAA TGCGT ATA ACGCA TGCTTAAATTCAACG TERM 1246 1413288 - 1413272 - G 72 -4.4 -4.81734 | AAATATCAGCAAAAA CGCCTT ATCAA AAAGCG CATGCCCTCTTTTTT ileS 1416218 - 1413456 - | isoleucyl-tRNA synthetase TERM 1247 1414265 - 1414287 + g 70 -5.6 -4.33105 | opp_overlap 1414266 1414268, overlap 1414266 CTGTTTGAGTGAAAA AGGTTTGAGA GAC TCTCAAATCG TTTTGGTAGTCATTA TERM 1248 1414286 - 1414266 - G 79 -6.9 -4.65895 | opp_overlap 1414265 1414266, overlap 1414268 TGTTTGAGTGAAAAA GGTTTGAGA GAC TCTCAAATC GTTTTGGTAGTCATT TERM 1249 1414266 - 1414286 + g 70 -9.1 -3.1914 | opp_overlap 1414266 1414268, overlap 1414265 TGTTTGAGTGAAAAA GGTTTGAGA GAC TCTCAAATC GTTTTGGTAGTCATT TERM 1250 1414531 - 1414541 + g 86 -8.2 -4.99861 | AAAACCACATCGCTA GGGC TTT GCCC TTTTTCTCCTTGATA HPSH_07260 1416510 - 1416253 - | hypothetical protein TERM 1251 1417097 - 1417121 + G 85 -5.7 -5.34309 | opp_overlap 1417099, overlap 1417099 ATTGAGCCTGATTAA AACCCCTAGAG GCT TTTTAGGGGTG TTTTTGTTTGATAAT TERM 1252 1417099 - 1417119 + G 82 -8.3 -4.29436 | opp_overlap 1417099, overlap 1417097 TGAGCCTGATTAAAA CCCCTAGAG GCT TTTTAGGGG TGTTTTTGTTTGATA HPSH_07265 1416612 - 1417232 + | hypothetical protein HPSH_07270 1417752 - 1417498 - | hypothetical protein TERM 1253 1417790 - 1417809 + r 72 -5 -4.78237 | opp_overlap 1417790 1417785, overlap 1417785 1417792 GATTAAAAATTTAAA TTCTAGCT CACT GGCTAGGA TTTTATTCTACAATA HPSH_07275 1419012 - 1417939 - | hypothetical protein TERM 1254 1418142 - 1418160 + g 72 -3.2 -5.0133 | overlap 1418144 CTTTGGATTTAATGC CGTTTAAA AGT TTTAAAAG TTTTTTAGCGCAATC HPSH_07280 1419998 - 1419009 - | polysialic acid capsule expression protein (kpsF) TERM 1255 1419284 - 1419296 + g 74 -4.8 -4.72386 | CATTGACTAAAATCG CGCT GCCTA AGCG TTTTTCACTCATTTC HPSH_07285 1422075 - 1419982 - | conserved hypothetical ATP-binding protein TERM 1256 1420196 - 1420218 + g 70 -3.4 -4.91852 | opp_overlap 1420179 1420199, overlap 1420199 1420201 CCTAAACTAGAAAAT TGAGAGCTTT CTA AAAGCGCTTG TTTGTTTTTACTCAC TERM 1257 1420199 - 1420215 + g 71 -5.1 -4.53857 | opp_overlap 1420179 1420199, overlap 1420196 1420201 AAACTAGAAAATTGA GAGCTTT CTA AAAGCGC TTGTTTGTTTTTACT TERM 1258 1421933 - 1421950 + g 88 -8.5 -4.67904 | TCTGCGTTTTTTTGC GCGTTTT CTCT AAAACGC TTTTTGCGGTTGGTG ksgA 1422924 - 1422109 - | dimethyladenosine transferase TERM 1259 1422216 - 1422236 + g 82 -4 -5.48303 | opp_overlap 1422216 CTAACACCTTATCAA GCTTTTCT CTATA AGAAACGC TTTTTTTAAGATTGT TERM 1260 1422471 - 1422459 - G 70 -3.3 -4.97158 | opp_overlap 1422459, overlap 1422454 GCACATCAAACAAAA GGGTA GCA TTCCC TATTGCTTGAGTTAA TERM 1261 1422667 - 1422641 - G 74 -5.2 -4.69962 | opp_overlap 1422642, overlap 1422642 GAGATCAAAAAATAA GGCTCTTCTTCT TTT AAAAAAAGAGCG TCTTTTTCCACTAAT TERM 1262 1422666 - 1422642 - G 70 -8.7 -3.4035 | opp_overlap 1422642, overlap 1422641 AGATCAAAAAATAAG GCTCTTCTTCT TTT AAAAAAAGAGC GTCTTTTTCCACTAA HPSH_07295 1423717 - 1423809 + | hypothetical protein TERM 1263 1423826 - 1423847 + T 93 -10.9 -4.05788 | TATTAGCCAAAGTTC CCCTGAGCT TAAA AGCTTAGGG TTTGCTTTGCGAAGC HPSH_07300 1424998 - 1423889 - | type I R-M system specificity subunit TERM 1264 1424462 - 1424482 + g 70 -2.5 -5.03314 | overlap 1424464 1424476 CAATAGTTCAAAGCT TAGAGCTTT TTT AACGCTCTC TTTTTTAAGAATGAG TERM 1265 1424682 - 1424666 - G 71 -5.3 -4.61747 | GGAATAAGCATAAAA TAAAAAA TCA TTTTTTA CTAATGTTTCATCGT TERM 1266 1424872 - 1424855 - G 70 -5.5 -4.41348 | CTTTTTTGAAATAAA GGCATCA GCGG TGTTGCC AAATGTGCCTATTTT HPSH_07305 1425892 - 1425011 - | formyltetrahydrofolate hydrolase (purU) TERM 1267 1425533 - 1425517 - G 77 -8.7 -3.9392 | opp_overlap 1425517, overlap 1425527 CGTGATTGGAAATAA CGCCCAA AAT TTGAGCG TTCAATTCCCCTCCA HPSH_07310 1426773 - 1425895 - | protease IV (PspA) TERM 1268 1425972 - 1425983 + g 76 -3.6 -5.24531 | CTTTTTCAATGAAGC GCTC CATG GGGC TTTTTTCTAGCCAAT TERM 1269 1426535 - 1426550 + g 75 -5.4 -4.75063 | opp_overlap 1426535 ATCAAAAGCAAAACG CCCTTA ATGC TAGGGG TTTTTAAGATTTTAT TERM 1270 1426635 - 1426649 + g 76 -7 -4.42806 | overlap 1426637 TAGCGAGATTGGGCG GGGCGC TTG GCGCGC TTTCTTTAGCGCTAA HPSH_07315 1426844 - 1427116 + | hypothetical protein TERM 1271 1427166 - 1427188 + T 74 -2.1 -5.42259 | gap 1, overlap 1427168 1427169 TTGCAAATTTTATAC GCTCTTTTTG TTTG TAAAAAG-GC TTTTTTTAGCGGTGA HPSH_07320 1427324 - 1427160 - | hypothetical protein HPSH_07325 1427349 - 1428023 + | hypothetical protein HPSH_07330 1428032 - 1428319 + | hypothetical protein HPSH_07335 1428309 - 1428470 + | hypothetical protein HPSH_07340 1428962 - 1428489 - | hypothetical protein HPSH_07345 1428967 - 1429149 + | hypothetical protein HPSH_07350 1429495 - 1429797 + | hypothetical protein TERM 1272 1429984 - 1429968 - g 71 -3.7 -4.96848 | overlap 1429971 CCCTTCACATAAAAA CTACATT ATA AATGAAG AAAATGAGATAACGA TERM 1273 1430252 - 1430266 + G 76 -7.1 -4.18488 | overlap 1430263 TATTAAAACCCTACA GCGCA TTTAT TGCGC TTTCTTGCGCTCAAT HPSH_07355 1429816 - 1430352 + | hypothetical protein HPSH_07360 1430336 - 1430443 + | hypothetical protein HPSH_07365 1430925 - 1430830 - | hypothetical protein TERM 1274 1431026 - 1431009 - R 74 -9.1 -3.07291 | opp_overlap 1431009, overlap 1430999 1430996 AAGGAGGTGATCCAA CCGCAGG TTCA CCTACGG TTACCTTGTTACGAC TERM 1275 1432424 - 1432403 - R 73 -9.5 -2.77899 | opp_overlap 1432403, overlap 1432400 GTGCGCCACTAATCA GCCTTCTAG CAAG CTAGAAAGC TTCATCGTTCGACTT TERM 1276 1432575 - 1432605 + r 81 -9.2 -3.84389 | opp_overlap 1432575 AGCGTATCACAAGAA CTCGTTTTATTTGA TTA TTGAATAAAACGGG TTGTGTTCTTAAGTA HPSH_07370 1433767 - 1432988 - | hypothetical protein HPSH_07375 1433891 - 1434379 + | peptidyl-prolyl cis-trans isomerase B, cyclosporin-type rotamase (ppi) HPSH_07380 1434397 - 1434627 + | carbon storage regulator HPSH_07385 1434627 - 1435430 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase smpB 1435427 - 1435885 + | SsrA-binding protein HPSH_07395 1435888 - 1436340 + | biopolymer transport protein HPSH_07400 1436351 - 1436752 + | biopolymer transport protein rpmH 1436826 - 1436960 + | 50S ribosomal protein L34 TERM 1277 1437366 - 1437355 - gf 72 -5.8 -4.3078 | AACTATATGAACAAA GCCT TAAA AGGC TTGAAAAAAGGAATA HPSH_07410 1436920 - 1437405 + | ribonuclease P, protein component (rnpA) HPSH_07415 1437392 - 1437748 + | hypothetical protein TERM 1278 1439102 - 1439135 + G 93 -9.8 -5.08255 | overlap 1439095 GCTCAGAGTGGATCT TATGGATTCATGAT CTATCC ATCATGGATCCGTA TTTTATTTTACCGCT TERM 1279 1439373 - 1439362 - g 83 -3.6 -5.60689 | TTAGAGAATAAAAAA CGCA TGCA CGCG CAAAACAAAAAGGAA HPSH_07420 1437754 - 1439394 + | putative inner membrane protein translocase component YidC HPSH_07425 1439394 - 1440191 + | hypothetical protein TERM 1280 1440602 - 1440590 - g 73 -7.7 -3.92324 | TTTGTGAAGATGAAA GCGTT TTA AACGC TCTAGCCAGGCAACT trmE 1440184 - 1441536 + | tRNA modification GTPase TrmE TERM 1281 1441860 - 1441842 - g 72 -8.8 -3.48276 | opp_overlap 1441825 1441842, overlap 1441826 GGCTTTTTTATAGAA GCCGGGTT TGA AACCGGGC TGTTACAAGGCACAC HPSH_07435 1441740 - 1443962 + | putative Outer membrane protein HPSH_07440 1444102 - 1443959 - | hypothetical protein TERM 1282 1444046 - 1444063 + g 85 -5.5 -5.2291 | TTCTGTTTTATGCGT GAGCGTT ATGG ATCGCTC TTTTTGTTCTCGTAT TERM 1283 1444246 - 1444259 + r 71 -5.3 -4.63928 | overlap 1444228 1444237 TGAGGATTTGAAAGC CCAAA GTCA TTTGG TTTTTCAAATAATCT TERM 1284 1444464 - 1444481 + r 73 -8.5 -3.30007 | opp_overlap 1444459 1444458 GGATCATAAGTGCAA GCAAGAT TAAT ATCTTGC TTATAACCCCGTATT HPSH_07445 1445393 - 1444482 - | hypothetical protein TERM 1285 1444679 - 1444689 + g 74 -4 -5.01811 | CATTAGCGCTGTCTG TGAA AAC TTCA TTTTTGATTTGATAG TERM 1286 1444744 - 1444759 + g 79 -6.8 -4.62475 | opp_overlap 1444744, overlap 1444739 AGCACTCTGGCATAA GCGCTT ATGA GAGCGC TTTTGATTTCTGCAT TERM 1287 1445272 - 1445298 + g 77 -5.1 -4.92812 | opp_overlap 1445272, overlap 1445274 GAAGTGGCTGAACCA CTCCCATAAAG ATAGC CTTTTTGGGTG TTTGTTTTGTTATAG HPSH_07450 1445744 - 1445403 - | hypothetical protein HPSH_07455 1446279 - 1445752 - | membrane-associated lipoprotein HPSH_07460 1446935 - 1446303 - | hypothetical protein TERM 1288 1447241 - 1447220 - R 77 -10.2 -2.54371 | AACTATTTGAAGTTA GCCCCTTT ATCAAA AAAGGGGC TAAAAAAGATTCCTA TERM 1289 1447286 - 1447302 + r 100 -10.9 -4.28018 | opp_overlap 1447300 AACAAGGCTCTTTAA CGCTCTT TAT AAGAGCG TTTTAATCGCGTCTT HPSH_07465 1447606 - 1447292 - | thioredoxin HPSH_07470 1448434 - 1447661 - | hypothetical protein dnaE 1452066 - 1448431 - | DNA polymerase III subunit alpha TERM 1290 1449207 - 1449195 - G 79 -6.9 -4.57569 | opp_overlap 1449195 CCATTGCCCCAAAAA GGGAG TTA CCCCC TTGCATCATTTCATT TERM 1291 1451869 - 1451886 + g 73 -2 -5.19212 | gap 1, overlap 1451863 CGCTTCCATGCCGAT GATAGGC TTAAT GCCT-TC TTTTTTCATGCTCGT HPSH_07480 1452214 - 1453266 + | cytochrome c551 peroxidase TERM 1292 1453288 - 1453247 - T 74 -5.9 -4.64591 | opp_overlap 1453246 1453259 TAATGACAGACAAAA CCCCTAAACTCTCTTTTTG ATTT CAAAAAGTCCTTTTAGGGG GCTTTTGGCGCTTAA HPSH_07485 1453358 - 1453269 - | hypothetical protein HPSH_07490 1454030 - 1453443 - | putative secreted motility protein HPSH_07495 1454726 - 1454049 - | hypothetical protein TERM 1293 1454075 - 1454087 + g 72 -3.3 -5.14563 | ACGGGCTTACGCTTT GCGCT TCA ACCGC TTTTTTAATCAAGGA TERM 1294 1454341 - 1454331 - G 79 -5.4 -4.89567 | overlap 1454337 1454339 TTCTAAAAGAGAAAA CGAT AAG ATCG TAAAACGAACTGCAT HPSH_07500 1455544 - 1454729 - | ABC transport system substrate binding protein TERM 1295 1454923 - 1454945 + g 84 -7 -4.8622 | AAGCCACATTATTGG CGCTAGAAAC GAG GTTGTTAGCG TTTTTGATTAAAGCG HPSH_07505 1456317 - 1455529 - | ABC transporter ATP-binding protein TERM 1296 1455905 - 1455918 + g 84 -8.1 -4.66163 | opp_overlap 1455892, overlap 1455893 AGGTGGTAAGCCCTA GTGGG CAAA CCCAC TTTTTCAATCCACAT HPSH_07510 1457447 - 1456314 - | hypothetical protein TERM 1297 1456828 - 1456798 - G 76 -4.6 -5.08255 | opp_overlap 1456806, overlap 1456799 AGGGTTAAAATAAAA GGGCCAATCTCTCT TAA AGCGAGTTTAGCCG TCATTTCCACCGACA TERM 1298 1456827 - 1456799 - G 70 -8.1 -3.63868 | opp_overlap 1456806, overlap 1456798 GGGTTAAAATAAAAG GGCCAATCTCTCT TAA AGCGAGTTTAGCC GTCATTTCCACCGAC TERM 1299 1457567 - 1457596 + H 95 -6.1 -6.38655 | gap 1, opp_overlap 1457566, overlap 1457586 TATTTGATAAAGGAT TGATTATTTTTAAA ATG TTTAAAAA-AATCA TTTTTTTTTGTGTTT HPSH_07515 1457581 - 1458276 + | outer membrane protein HPSH_07520 1459303 - 1458281 - | branched-chain amino acid aminotransferase TERM 1300 1458958 - 1458933 - G 70 -5.4 -4.32857 | opp_overlap 1458954, overlap 1458918 1458919 1458954 GGGCGCAAATACAAA CTCGCCCC ACTTTTATAA GGAGCGAG CCATTTTTGATTCGC TERM 1301 1459364 - 1459350 - R 70 -4.2 -4.66609 | GATTGTATCCAAAAA GGGGTT AAA AATCCC TCAAGTAACTGATTT HPSH_07525 1460100 - 1459354 - | outer membrane protein (omp31) HPSH_07530 1462896 - 1460215 - | DNA polymerase I (polA) TERM 1302 1461919 - 1461904 - G 81 -7.5 -4.58283 | opp_overlap 1461903 1461901 1461904 TAATTTTTCTAAAAA CGCGC TCAAAG GCGCG GTGTTTTCTAAAACG TERM 1303 1462453 - 1462437 - G 80 -6.5 -4.72272 | overlap 1462439 TTTTGCCATCAAAAA GCGCGAT TTT ATCGCTC AAAAGCTGGTTAAAA TERM 1304 1463473 - 1463494 + r 80 -6.7 -4.78572 | TGCGTGTCATGGATT TTTATCGTG TTGG CATGATAAA TTTTCTTACTTGACA HPSH_07540 1466224 - 1463549 - | type II restriction modification enzyme methyltransferase TERM 1305 1464084 - 1464110 + g 75 -10.2 -3.21912 | overlap 1464085 CCCTTATGATTGATG TGGCGTTTTTGA ATG TCAAAATCGCCG TTACTCGCTTCAAAC TERM 1306 1464085 - 1464109 + g 79 -11.5 -2.52933 | overlap 1464084 CCTTATGATTGATGT GGCGTTTTTGA ATG TCAAAATCGCC GTTACTCGCTTCAAA TERM 1307 1464928 - 1464948 + g 75 -5.4 -4.80396 | TTTCAGCGTTAAGTT CCACGC CTAAAAGTT GCGTGG TTTTTGCGTCTTTTA TERM 1308 1465381 - 1465396 + g 70 -2.6 -5.10461 | gap 1 TTTCTTTAAAACTGG CGAGCAT TAG AT-CTCG TTTTTCTTCGCTCAA HPSH_07545 1466832 - 1466257 - | hypothetical protein TERM 1309 1466284 - 1466294 + g 79 -6.8 -4.49756 | opp_overlap 1466260 GCTGCAAAGCGCGAT CGCA AAG TGCG TTTTGATGTTTAGGG tdk 1467395 - 1466820 - | thymidylate kinase coaD 1467870 - 1467397 - | phosphopantetheine adenylyltransferase HPSH_07560 1468433 - 1467870 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase flgA 1469099 - 1468443 - | flagellar basal body P-ring biosynthesis protein FlgA HPSH_07565 1468414 - 1468518 + | hypothetical protein TERM 1310 1468767 - 1468778 + gT 76 -4.4 -5.1675 | GGTGTTGGTAGCGGT GATG TTTT CATC TTTTTTAATCGCTCC HPSH_07575 1471141 - 1469096 - | DNA helicase II TERM 1311 1470158 - 1470175 + g 71 -7 -4.10552 | opp_overlap 1470172, overlap 1470172 ATTTTCTAAATTTTC GCCCTT CTTTAA AAGGGC TTTGATTTGATAAGC TERM 1312 1470759 - 1470774 + g 70 -3.2 -4.90266 | overlap 1470746 1470760 AAGCTTGAAATTTTA AGCTGT TTGC ACAGCG TTTTTACTTCATCGC HPSH_07580 1473675 - 1471141 - | hypothetical protein TERM 1313 1472224 - 1472210 - G 95 -4.3 -5.75822 | opp_overlap 1472214, overlap 1472214 1472216 GACAAATCAAAAAAA GAAAG GGCTT CTTTC AAGCGCTTGTTTTCC TERM 1314 1472230 - 1472214 - G 73 -2.2 -5.25976 | opp_overlap 1472214, overlap 1472210 1472216 AATCAAAAAAAGAAA GGGCTT CTTTC AAGCGC TTGTTTTCCAACGCT TERM 1315 1472754 - 1472742 - G 74 -9.1 -3.5332 | opp_overlap 1472741 1472742, overlap 1472738 AAAGCCCTAAAGCAA GCCCA TCT TGGGC GTTTGCGCTTTTTTG TERM 1316 1473588 - 1473609 + g 81 -5.9 -5.08367 | gap 1, opp_overlap 1473591 1473592, overlap 1473592 AGGGGATTTTAGAAT GAATGCCCTT TAA AGGGGC-TTC TTTTTCGTTTCTGTT TERM 1317 1473592 - 1473606 + g 82 -7.8 -4.60053 | opp_overlap 1473592 1473591, overlap 1473588 GATTTTAGAATGAAT GCCCTT TAA AGGGGC TTCTTTTTCGTTTCT HPSH_07585 1474932 - 1473685 - | seryl-tRNA synthetase HPSH_07590 1475730 - 1474933 - | hypothetical protein TERM 1318 1475232 - 1475199 - G 74 -6 -4.37886 | overlap 1475180 GCATCTGGCACAAAA GCCGCCACCTTTCA TGGGAT TCAAAGGTGGCCAC ACTGCTTAAAAGCAC TERM 1319 1475427 - 1475444 + g 70 -5.5 -4.42806 | overlap 1475442 GGATTAAGCGTTGTT GCGTGTA ATAT TTCACGC TTTCTTTAGAAATGA HPSH_07595 1475994 - 1475734 - | hypothetical protein TERM 1320 1475931 - 1475941 + g 72 -3.2 -5.04265 | AGCTTTTTTTAGGGG CGTT TTT AGCG TTTTTGGTGTTTTTT ubiE 1476744 - 1476004 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 1321 1476506 - 1476521 + g 70 -3.2 -5.00616 | TCCTTAAACTCTATA GCGC AATTTAGA GCGC TTTTTTGCCAAGCAA TERM 1322 1476692 - 1476710 + g 95 -6.1 -5.5604 | TAAGAGCTGGCTATA TCATCAA ACATG TTGATGA TTTTTTCTTGCTTGA HPSH_07605 1477200 - 1476754 - | hypothetical protein HPSH_07610 1477783 - 1477211 - | hypothetical protein TERM 1323 1477722 - 1477710 - G 74 -4.1 -5.09245 | TCAAAATCATAAAAA GGCAT AAG ATACC CTAAAAAACGAGACG HPSH_07615 1478900 - 1477770 - | hypothetical protein TERM 1324 1477876 - 1477861 - G 81 -7.6 -4.60255 | opp_overlap 1477861 ATAAGCGCGTAAAAA TGGATG GAAA CATCCA TGAATTCCGCACGCA TERM 1325 1478230 - 1478253 + g 85 -7.5 -4.96848 | AAGATCAAAAGCCTT GCAAATTGC CTTAAA GCGATTTGC TTTTTGTCTAAAAGG TERM 1326 1478358 - 1478343 - G 84 -6.8 -4.86613 | opp_overlap 1478343 CAAAATGAAAATAAA CACGCT AGAG AGCGCG TAATTCAAATACCCC HPSH_07620 1479985 - 1478897 - | hypothetical protein TERM 1327 1479679 - 1479659 - G 72 -4.7 -4.77165 | opp_overlap 1479659 CGCGTTATAATAAAA GGGCAAA TCCACCT TTCGCCC CATTTTGATTTTTTT HPSH_07625 1480995 - 1480006 - | conserved hypothetical secreted protein HPSH_07630 1482539 - 1481007 - | lipase-like protein TERM 1328 1481404 - 1481381 - G 70 -9.6 -2.62184 | gap 1 CTGTGGGGGAGAGTA TGGGCATGCGC CCG GC-CACGCCCA CAAACCAACTAGGGA TERM 1329 1481485 - 1481473 - G 79 -3.3 -5.52909 | overlap 1481477 TAAGAGCCAAAAAAA TGCAC TTG GGGCA AGAATTTAGCGATCT TERM 1330 1481789 - 1481814 + g 75 -9.9 -3.43689 | opp_overlap 1481800 TTTGCCCTACTTTTT GCATTTTCAAA GCGT TTTGGAAATGC TTATAATGGCCTTTT TERM 1331 1482136 - 1482150 + g 78 -7.1 -4.35581 | TGAGGAGTGATGAGT TGGGG AGGGA CCCCA TTTTGGATATTTTGC TERM 1332 1482282 - 1482262 - G 74 -4.8 -4.73448 | gap 1, overlap 1482275 AGATACACGTAAAAA GCGCTCAAA TCAA TTTGAG-GC AAAAAAGAAAGCTTA HPSH_07635 1483885 - 1482536 - | hypothetical protein TERM 1333 1482569 - 1482580 + g 70 -5.8 -4.46212 | CTGATCTTTTTTGCT CGCT TTTA AGCG TTTTATCCTAGCCCC HPSH_07640 1485585 - 1483984 - | phosphate permease TERM 1334 1484788 - 1484776 - G 71 -6.3 -4.1891 | TTTCTTTAACACAAA CCTTT TAA AAAGG ATAAAGATTAAAAGC TERM 1335 1485067 - 1485056 - G 73 -2.2 -5.26918 | overlap 1485066 ATACCTGATAAAAAA TGCC AATT GACA GCAGACATTCCAGCT HPSH_07645 1485725 - 1485994 + | conserved hypothetical nifU-like protein TERM 1336 1486090 - 1486100 + G 73 -2.4 -5.26918 | overlap 1486079 AGCCCATTACGCTGA AGCG TTA CGCC TTTTTTCTGAAGTGT HPSH_07650 1486007 - 1486618 + | hypothetical protein TERM 1337 1486911 - 1486930 + G 80 -4.3 -5.24129 | opp_overlap 1486909 TGAATAAAAAGACCG CCCTTTT AGGCAC AAGAGGG TTTTTTATCAACGAC murE 1486622 - 1487965 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase HPSH_07660 1487969 - 1488919 + | transaldolase TERM 1338 1488924 - 1488953 + F 76 -4.4 -5.07652 | overlap 1488939 GCAGTTTTTGATTTT TAAGGGTTTTTT GGATAG AATAAGCCCTTA TTTTATTTTAAAGGA HPSH_07665 1488974 - 1489510 + | 50S ribosomal protein L25/general stress protein Ctc HPSH_07670 1489520 - 1490080 + | peptidyl-tRNA hydrolase TERM 1339 1490467 - 1490484 + G 73 -5.5 -4.64844 | CACGGCCGTTTATGT GGGGTTG AACG CGACTCC TTTTGTGTATATGGA TERM 1340 1490973 - 1490991 + G 77 -6 -4.57837 | overlap 1490967 TTTTTGTGCCGTTTT TAAGCGTT TTA ATCGCTTA TTTTTCGCCCAGTCT HPSH_07675 1490135 - 1491202 + | hypothetical protein HPSH_07690 1492300 - 1492473 + | restriction endonuclease TERM 1341 1493165 - 1493155 - T 74 -3.2 -5.32944 | CCCATAATCAAAAAA GCCA TAG TAGC GCAACCCAAACCACC HPSH_07705 1493761 - 1493654 - | hypothetical protein TERM 1342 1494142 - 1494168 + G 78 -3 -5.50723 | TTCAAAAGATACTCA TGCTTAAAGTGA TCT TAGCGTTAAGCA TTTTTCTTTTGGTGC HPSH_07710 1493868 - 1494305 + | hypothetical protein HPSH_07715 1496638 - 1494302 - | putative cation transporting P-type ATPase TERM 1343 1494474 - 1494487 + g 93 -6.7 -5.40474 | TGATAGACTTTTTGA GCGTT ATCA AACGC TTTTTTTAGCAAACT TERM 1344 1494534 - 1494552 + g 90 -8.9 -5.0133 | AGCAAAATATCGCAT GCGCTTT TACTC AAAGCGC TTTTTTCAAACCCTA TERM 1345 1496148 - 1496158 + g 81 -6.8 -4.7416 | opp_overlap 1496147 1496148, overlap 1496155 AAAGTGAGCAAATAG GAGC GTT GCTC TTTTTGGGCTTTTAG TERM 1346 1496279 - 1496302 + g 76 -4.6 -5.01732 | gap 1, opp_overlap 1496264 CACGATTTGCAAATG GTGGGTGGTGA AAT TCA-CGCTCAC TTTTTTAACCCCCTT HPSH_07720 1497380 - 1496664 - | hypothetical protein HPSH_07725 1498396 - 1497362 - | riboflavin biosynthesis protein (ribG) TERM 1347 1497571 - 1497557 - G 76 -7.1 -4.14598 | TTCAATGAAATTAAA CCCCT TCTCT AGGGG CAAATCTTTAGGGTC TERM 1348 1497771 - 1497751 - G 77 -8.3 -3.85698 | opp_overlap 1497744 1497754, overlap 1497754 TGGTTTTCCCAGAAA CAATAAGCG TGT CGCATATTG CTCGCTGGTTGTGCG TERM 1349 1497784 - 1497798 + g 70 -2.8 -5.02074 | TTGCTCGCTGGTTGT GCGT GAAAACA ACGC TTTTTTGCCCGGTGA TERM 1350 1497905 - 1497920 + g 72 -3.2 -5.07567 | CCTAAAAGGCAGGAG CAAGTC TTTA GCCTTG TTTTTTAAACTCTCA TERM 1351 1498226 - 1498256 + g 71 -4 -4.95896 | TAACGCTGATTGGGC GGCTAAGACTTC TGCATGC GGGGTTTTGGCC TTTTTGTGGGTTTCT HPSH_07730 1499619 - 1498393 - | sodium/glutamate symport carrier protein/glutamate permease TERM 1352 1500692 - 1500669 - g 72 -4.6 -4.74767 | gap 1, overlap 1500685 ACAACCAAGACAAAA CGCTCTACATT TAC AATGT-GTGCG ATCACAAGAAATGCT HPSH_07735 1499753 - 1500904 + | conserved hypothetical ATP-binding protein HPSH_07740 1502290 - 1500914 - | ferrodoxin-like protein TERM 1353 1501790 - 1501764 - Gf 71 -3.8 -4.92239 | gap 1, overlap 1501765 CTAAAAAGCCAAAAA CCCATAGCAAT AGGGTG ATCGCTA-GGG TTTTTAAGATACATA TERM 1354 1502878 - 1502902 + GH 85 -5.7 -5.3236 | CGCTAGCATTCTAGG GGTAGGCACAG CGA CTGTTCTTATC TTTTTTGTGCCTTAT HPSH_07745 1502270 - 1503058 + | hypothetical protein HPSH_07750 1503055 - 1503408 + | dihydroneopterin aldolase HPSH_07755 1503392 - 1503718 + | FrpB-like protein TERM 1355 1503956 - 1503944 - f 83 -4.8 -5.4756 | AAGCTCAAGAAAAAA CCCA CACTT TGGG TAAGGTAACCACTAA TERM 1356 1506471 - 1506486 + F 81 -6.2 -4.87318 | opp_overlap 1506471 AGTTCTAAAATTAAA GAAATC CTAG GATTTC TTTTTGAATTTTGAA TERM 1357 1507814 - 1507800 - g 79 -5.8 -4.86621 | AGCCTGAATGAAAAA GATTTT GAA AAAATC GCTCTAATCTTAGCA HPSH_07770 1506690 - 1507850 + | selenocysteine synthase TERM 1358 1508858 - 1508848 - g 87 -3.2 -5.72207 | TTGAAATTAAAAAAA TCCC TAT AGGA GAATTGAGTGCTGAA nusA 1507938 - 1509125 + | transcription elongation factor NusA HPSH_07780 1509259 - 1509360 + | hypothetical protein HPSH_07785 1510115 - 1509357 - | hypothetical protein HPSH_07790 1510542 - 1510105 - | Uncharacterized phage-associated protein HPSH_07795 1512370 - 1510751 - | hypothetical protein TERM 1359 1511458 - 1511469 + g 85 -3 -5.71983 | ACATCAAAGGGAGTT CAAA AATT TTTG TTTTTTTGTGGTTGA TERM 1360 1511745 - 1511759 + g 78 -2.8 -5.41787 | GTTTGGGCATCAATC TCATCG CTC CAATGA TTTTTGTCTTTTTTA HPSH_07800 1512911 - 1512387 - | hypothetical protein TERM 1361 1512647 - 1512659 + g 74 -6.3 -4.38412 | TTTCTTTGTCTTTTT GATCT ATT AGATC TTGTTTGTATTTTTT HPSH_07805 1516751 - 1512912 - | putative type II DNA modification enzyme (methyltransferase) TERM 1362 1513305 - 1513294 - G 73 -5.8 -4.58946 | TCATAAACAAAACAA GGCT CTTT AGCC ATAATACAAGGATAC TERM 1363 1513791 - 1513776 - G 85 -7.6 -4.91852 | overlap 1513790 GTTAGCAAAAATAAA GCTTTC TGTT GAAAGC GCGTTTTGCCTCATG TERM 1364 1514509 - 1514525 + g 74 -5.3 -4.70739 | overlap 1514511 AGTTCTAAATGCTCT TTTAAAA ATT TTTTAAA TTTTAATTCTTTTTG TERM 1365 1515871 - 1515857 - G 88 -8.6 -4.72863 | TGAAAGAAATTAAAA GGCTTT CTA AAAGCC GTAAAAACAAGATGC TERM 1366 1516432 - 1516418 - G 88 -2.8 -6.04324 | opp_overlap 1516418 TTAAAAAATAAAAAA CCATTT GAC AAAAGG CTTTACTGAGCGGAT HPSH_07810 1519772 - 1516857 - | type III restriction enzyme TERM 1367 1518583 - 1518569 - G 71 -4.2 -4.86731 | opp_overlap 1518569, overlap 1518570 GTTTTTCAAATAAAA GGGCTA ATT TAGCCG GCTTTTCATTCTCGC TERM 1368 1519229 - 1519247 + g 73 -6.8 -4.25458 | CGCCATTGAATAGAT TCGTGTTT TCT AAACATGA TTTATTAATAACATT TERM 1369 1519635 - 1519625 - G 73 -5.4 -4.63932 | TATTTTCTAATAAAA GATC TTT GATC GCCCCTATTTCAAAA HPSH_07815 1521676 - 1519775 - | type III DNA modification enzyme (methyltransferase) HPSH_07820 1523590 - 1521719 - | DNA recombinase (recG) TERM 1370 1522284 - 1522302 + g 79 -5.3 -5.09895 | ATGACTTGATGGTTT TTAGCGA TTTCT TCGCTGA TTTTTTCCATCACTA TERM 1371 1522933 - 1522922 - G 70 -5.8 -4.42287 | overlap 1522918 TAAAGAAGCAATAAA CGCT TTAA AGCG CTCGCTGTTATTGGG TERM 1372 1523293 - 1523283 - G 73 -6.8 -4.2679 | opp_overlap 1523283 TAAGCTTGATTAAAA GAGC TTT GCTC TAATTTACCATAAAT TERM 1373 1523913 - 1523901 - g 83 -4.9 -5.19998 | ATAACGAAAATAAAA TTGAT GAA ATCAA TGAAGAAAACGCTGA HPSH_07825 1523672 - 1524016 + | hypothetical protein TERM 1374 1524605 - 1524617 + G 89 -5.5 -5.51046 | opp_overlap 1524605 TTTGAATACAACTCA GCCTT TGT GAGGC TTTTTTCTGTCTTTA HPSH_07830 1524020 - 1524655 + | hypothetical protein HPSH_07835 1525404 - 1524652 - | exodeoxyribonuclease TERM 1375 1525282 - 1525250 - G 75 -5.7 -4.66833 | opp_overlap 1525250 1525259 GCGCAATTCCAAAAA TCAAAATACCCTTTA AAT TCAAAGGTGTTTTGA TCTTGCTGCATTTTA HPSH_07840 1527021 - 1525582 - | periplasmic competence protein TERM 1376 1526122 - 1526140 + gH 70 -8.2 -3.2032 | opp_overlap 1526121, overlap 1526121 CGGCTCTTCTAAAGG CTCTGTTT TTT GAACAGAG ATTTTAGTATAGGGG HPSH_07845 1527020 - 1527097 + | hypothetical protein HPSH_07850 1527148 - 1527222 + | hypothetical protein TERM 1377 1527243 - 1527272 + T 89 -6.5 -5.71983 | opp_overlap 1527243 ACGCTTTTTGATAAG CCTTTTTTCATTC ACTT GAATGGAAAGCGG TTTTTTTGTCGTTCA dnaA 1528617 - 1527250 - | chromosomal replication initiation protein TERM 1378 1527475 - 1527490 + g 79 -3.2 -5.40072 | overlap 1527477 ATACACGACTAATTT TCTCGC TAGA GCGACA TTTTTTTGGCGCGAA TERM 1379 1529333 - 1529278 - g 71 -5 -4.53439 | gap 1 CTAAAGTCAAACAAA TTTTAGAAAACACCATTGATAGTTTAA TAC TTTAGCTATC-ATGGAGCATTCTAAAA TTAAAGGCGGTTGAA HPSH_07860 1528725 - 1529312 + | purine nucleoside phosphorylase HPSH_07865 1529348 - 1529587 + | hypothetical protein TERM 1380 1530002 - 1529991 - g 70 -5.8 -4.35885 | ATTTATTAGAAGAAA CGCT TAAA AGCG AGAGCGATTTATTGA HPSH_07870 1529588 - 1531381 + | D-fructose-6-phosphate amidotransferase thyX 1531402 - 1532028 + | FAD-dependent thymidylate synthase TERM 1381 1532079 - 1532100 + F 75 -10.1 -2.50113 | opp_overlap 1532079 1532084, overlap 1532078 TAATGTTGTGAAGCA CCCAACCGC TAAA GCGATTGGG CTTCCTAGGCTGATG TERM 1382 1532100 - 1532079 - f 86 -12.3 -2.71681 | opp_overlap 1532078 1532079, overlap 1532084 TAATGTTGTGAAGCA CCCAACCGC TAAA GCGATTGGG CTTCCTAGGCTGATG TERM 1383 1532145 - 1532159 + F 85 -8.6 -4.12942 | GGTTTTCACTCTGTG TCCCTA TCA TAGGGA TTTTACAGAGTTTGA HPSH_07880 1532451 - 1532543 + | hypothetical protein TERM 1384 1532560 - 1532581 + T 93 -10.9 -4.05788 | TATTAGCCAAAGTTC CCCTGAGCT TAAA AGCTTAGGG TTTGCTTTGCGAAGC HPSH_07885 1533750 - 1532623 - | type I R-M system specificity subunit TERM 1385 1532811 - 1532839 + g 73 -8.3 -3.73509 | opp_overlap 1532787 1532784 1532817, overlap 1532787 1532813 1532817 CTAAAATTTTATCTT TTGAAATGCTATA AGG TGTAGCATTTCTA TTTGAAATTTCATAT TERM 1386 1532813 - 1532837 + g 82 -10.9 -3.44321 | opp_overlap 1532787 1532784 1532817, overlap 1532787 1532811 1532817 AAAATTTTATCTTTT GAAATGCTATA AGG TGTAGCATTTC TATTTGAAATTTCAT TERM 1387 1532817 - 1532833 + g 70 -5.9 -4.3453 | opp_overlap 1532784 1532817, overlap 1532813 1532811 TTTTATCTTTTGAAA TGCTATA AGG TGTAGCA TTTCTATTTGAAATT TERM 1388 1533211 - 1533231 + g 70 -2.5 -5.03314 | overlap 1533213 1533225 CAATAGTTCAAAGCT TAGAGCTTT TTT AACGCTCTC TTTTTTAAGAATGAG HPSH_07890 1536209 - 1533747 - | type I restriction enzyme M protein (hsdM) TERM 1389 1534004 - 1534016 + g 70 -2.6 -5.02421 | ACGCTTTTAATTCCA GCTC CTCAT GGGC TTTATTTTTCATTTT TERM 1390 1534059 - 1534078 + g 84 -2.2 -5.84432 | overlap 1534061 TTTAGCTTCTAGCAA TTCTAAAG CGGT TTTTAGGA TTTTTTTATCTTCTA TERM 1391 1534418 - 1534408 - G 74 -4 -5.02074 | TTAGCGCTCAAAAAA TCAT TGA ATGA AAGAAGGAACCAATC TERM 1392 1534537 - 1534549 + g 75 -5.5 -4.74103 | overlap 1534528 ACCTTTGAGCAAACG CTCTC TAT GAGGG TTTTTGGGTTAAAAC TERM 1393 1535058 - 1535045 - G 90 -5.2 -5.53991 | CATCTATCAAAAAAA CGCC CTTTCT GGCG CGCGCGTTTTCTTTG TERM 1394 1535707 - 1535696 - G 75 -5.8 -4.81863 | AAAGGGACAATAAAA GCGA AACT TCGC TAGGGGTGTAAAACT TERM 1395 1536577 - 1536552 - g 76 -6.9 -4.41817 | opp_overlap 1536552 CAAAATAAGCCAAAA TGAACCAACCC AAAC AAGTTGGCTCA TTGATTGGAAAGATG HPSH_07895 1536280 - 1539255 + | type I restriction enzyme R protein (hsdR) HPSH_07900 1539255 - 1539962 + | hypothetical protein TERM 1396 1539999 - 1539989 - T 86 -8.2 -4.66318 | opp_overlap 1539988, overlap 1539990 1539991 ATCATTTCAATAAAA CCGC TAA GCGG CTCATTTGAGCGGCT HPSH_07905 1542577 - 1540052 - | iron(III) dicitrate transport protein (fecA) HPSH_07910 1542938 - 1543096 + | hypothetical protein HPSH_07915 1544087 - 1543152 - | arginase (rocF) TERM 1397 1543686 - 1543671 - G 70 -9 -3.13109 | opp_overlap 1543682, overlap 1543670 1543682 GACACGATTTAAAAC CATGCC CAAA GGCATG CCGTGGATATGCTTT HPSH_07920 1544291 - 1545433 + | alanine dehydrogenase TERM 1398 1546775 - 1546741 - g 85 -2.9 -5.72207 | gap 1, overlap 1546743 1546751 1546764 TTTAAATGAAAAAAA TATCACGCAAGACTTC AAGA GAAGCCT-GCAAGACA GCAACTTATACACAA HPSH_07925 1545551 - 1547248 + | hypothetical protein HPSH_07930 1547987 - 1547259 - | putative outer membrane protein TERM 1399 1547815 - 1547793 - G 85 -5.6 -5.27335 | TTTTTCAAAGAAAAA TTGATACCCT AAA AGTGCATCAA AGCCCTTGATAGTAG HPSH_07935 1548173 - 1549027 + | inorganic polyphosphate/ATP-NAD kinase HPSH_07940 1549040 - 1550614 + | DNA repair protein TERM 1400 1551453 - 1551436 - g 79 -3.5 -5.36018 | AGCAAAAAAAAGAAA CAAAAAT CGCA ATTCTTG TATTTAGAAGAAGAG TERM 1401 1551592 - 1551580 - g 73 -6.9 -4.21408 | AATTCTAAAATCAAA CGCCC GAT GAGCG GGTATGAAGTGCTGT TERM 1402 1551679 - 1551661 - g 71 -6 -4.14724 | AAAGAAAATATCAAA CTCTTACA AGA CGCAAGAG CGAATGATTTATGGA HPSH_07945 1550611 - 1551918 + | fibronectin/fibrinogen-binding protein HPSH_07950 1551937 - 1552233 + | hypothetical protein TERM 1403 1552283 - 1552313 + F 87 -10 -4.02997 | TTTTTTTAATTTGGT TTAAGTAAAACTTG ATG TAGGTTTTACTTAA TTATTATATTATATT TERM 1404 1552387 - 1552369 - f 82 -7.6 -4.59489 | opp_overlap 1552369 1552364 AATTTAAACAATAAA CATAAAAA TAT TTTTTATG TTGACTTACTATTAT TERM 1405 1552790 - 1552806 + G 72 -4.4 -4.67556 | AGGACACAACCATGA GCGAAG CACCA TTTCGC TTTTTAGCATGTTCT HPSH_07955 1552564 - 1552884 + | hypothetical protein HPSH_07960 1552923 - 1553252 + | hypothetical protein TERM 1406 1553281 - 1553263 - f 100 -8.9 -6.00814 | opp_overlap 1553262 1553259 1553263 AATAAGCAAAAAAAA TCCCCTA TTGAC TAGGGGA CTTCTTTATTTAAAA TERM 1407 1553263 - 1553281 + F 73 -8.9 -3.18884 | opp_overlap 1553263, overlap 1553262 1553259 AATAAGCAAAAAAAA TCCCCTA TTGAC TAGGGGA CTTCTTTATTTAAAA HPSH_07965 1553351 - 1553548 + | hypothetical protein HPSH_07970 1554385 - 1553522 - | DNA polymerase III subunit epsilon TERM 1408 1553720 - 1553708 - G 70 -7.7 -3.65313 | overlap 1553710 TAAGCATATTTCAAA GAGCT TAT AGCTC GCTAAAGCGTCCGCA TERM 1409 1554185 - 1554172 - G 79 -3.1 -5.46129 | CAATAAAGGAAAAAA CCTCA TCTT TAAGG GGGGTTTTAAGGTTT HPSH_07975 1555016 - 1554363 - | ribulose-phosphate 3-epimerase TERM 1410 1554728 - 1554744 + g 72 -4.3 -4.73108 | overlap 1554729 TTTTAATGAGTTGCA ACACCCT GTG GGGGTGC TTTTCATTTTCTGCA HPSH_07980 1555087 - 1555959 + | fructose-1,6-bisphosphatase TERM 1411 1555992 - 1556010 + G 73 -6.7 -4.19238 | opp_overlap 1555992 AAATTAGAATATGAA GAGCGTT TTAAT GACGCTC TTTTGAAATTGCAAG HPSH_07985 1555959 - 1556162 + | hypothetical protein TERM 1412 1556228 - 1556245 + G 71 -7.1 -3.93262 | TTTTTACACCCACCC CAAAATC GCGC GATTTTG TTTGGATTTATTAAA HPSH_07990 1556175 - 1557071 + | putative type II methylase protein HPSH_07995 1557064 - 1557795 + | hypothetical protein TERM 1413 1557817 - 1557831 + T 83 -7.2 -4.68908 | TGCACCCATTTATTT CTTGTA AAA TACAAG TTTATTTTCAGTGCA HPSH_08000 1558337 - 1557885 - | hypothetical protein TERM 1414 1558357 - 1558388 + r 78 -10.3 -2.7693 | opp_overlap 1558354 1558353 1558357 1558366, overlap 1558356 1558355 GTTTATTGAAAGTTA GTTTTTAAAGCGC AAAAAC GCGCTTTAAAACC CTATTTCATTTGCAA TERM 1415 1558388 - 1558357 - R 81 -11 -2.66272 | opp_overlap 1558357 1558356 1558355, overlap 1558354 1558353 1558366 GTTTATTGAAAGTTA GTTTTTAAAGCGCA AAAA CGCGCTTTAAAACC CTATTTCATTTGCAA tsf 1559456 - 1558389 - | elongation factor Ts TERM 1416 1558674 - 1558685 + g 84 -2.2 -5.86061 | TTGCGCTTTTAATTC GTCT TCAA AGGC TTTTTTTTGGTGCGC TERM 1417 1559310 - 1559324 + g 73 -5.7 -4.56597 | ATCGGCTTTTTTAGC GGCTT TACTC AAGCC TTTTTCGCGCAAGAA TERM 1418 1559365 - 1559381 + g 70 -3 -5.05782 | gap 1 TTTTGCAAATCCCCA GCCACTT CTAC AAG-GGC TTTTTTGCAATCCAT TERM 1419 1559411 - 1559423 + g 79 -4.9 -5.12617 | TCATGCCCGCATCGG TTAAG TCC CTTAA TTTTTTGACTAATTG rpsB 1560250 - 1559456 - | 30S ribosomal protein S2 HPSH_08015 1560343 - 1560429 + | hypothetical protein TERM 1420 1561282 - 1561268 - g 93 -7.8 -5.40072 | opp_overlap 1561268 CTGGCTTGAAAAAAA GAGCGA ATA CCGCTC TTTCAAAAAACTCAA TERM 1421 1562386 - 1562376 - g 71 -4 -4.8543 | GAATTTTTAGAAAAA TTAG AGG CTAA AGAGATCGCTTCTTT HPSH_08020 1560501 - 1563350 + | helicase TERM 1422 1563530 - 1563555 + G 72 -3.3 -5.16237 | gap 1, overlap 1563531 TTTGCGCTATGGCAC ACCCCT-TTTGG GTT TCAAATAGGGGA TTTTTTCATCGGCTT HPSH_08025 1563341 - 1564690 + | Na+/H+ antiporter yajC 1564738 - 1565031 + | preprotein translocase subunit YajC secD 1565031 - 1566608 + | preprotein translocase subunit SecD TERM 1423 1567222 - 1567238 + G 81 -6.7 -4.7373 | opp_overlap 1567225 GATTGGGTATTCCAT TAATGAT ACG ATCATTA TTTTTGATAGGATCA secF 1566617 - 1567588 + | preprotein translocase subunit SecF TERM 1424 1567865 - 1567881 + G 70 -8 -3.63707 | opp_overlap 1567879, overlap 1567879 ATGCTCATGATTGGG GCGTTG ATTAG CAACGC TTTCAGCCTTATCTT HPSH_08045 1567598 - 1567936 + | hypothetical protein leuS 1567946 - 1570366 + | leucyl-tRNA synthetase HPSH_08055 1570363 - 1570875 + | hypothetical protein TERM 1425 1571166 - 1571151 - g 71 -7.6 -3.86346 | CTATTGTTGGAGAAA GCGTTT TAGA AAACGC CCACCAGCAATTGCA TERM 1426 1571609 - 1571597 - g 75 -7.7 -4.08692 | opp_overlap 1571597 GAAGTGGCTCTAAAA GCGTT TGA AACGC TTATGCCTTGCAAAG HPSH_08060 1570865 - 1572034 + | folylpolyglutamate synthase HPSH_08065 1572034 - 1572960 + | tox-R activated gene TERM 1427 1573711 - 1573732 + G 76 -4.5 -5.08824 | gap 1 GGATGAGCACAGGGC CGCATTTGCA TTA TG-AAGTGCG TTTTTTAGATCAACC HPSH_08075 1572969 - 1573904 + | toxR-activated gene (tagE) HPSH_08080 1573919 - 1574233 + | hypothetical protein TERM 1428 1574697 - 1574715 + G 93 -7.4 -5.40072 | TTTATGCGCCCAATT CTAAAGCG TAT CGCTTGAG TTTTTTTGACACGGA TERM 1429 1574942 - 1574930 - g 82 -6.3 -4.91109 | TTTTTAGGAGAAAAA GCAAA CGA TTTGC TGCGTGCCTATAAAA TERM 1430 1575806 - 1575823 + G 77 -6.3 -4.58685 | ACAGAAGTGGCGATG CATGCGA TTTT TTGCATG TTTTTGAACGGCTTT TERM 1431 1577164 - 1577148 - g 71 -3.7 -4.8743 | GTGAAAAGAAAGAAA GCTTAAA AGC TCCAAGC AAAGACGATAACGAT HPSH_08085 1574237 - 1577236 + | transcription-repair coupling factor TERM 1432 1577709 - 1577697 - g 76 -3.3 -5.28166 | CAAAATGAAGAAAAA GGCTT TTT ATGCC CATGCCATGGGGGGC HPSH_08090 1577361 - 1577864 + | ubiquinol cytochrome c oxidoreductase, Rieske 2Fe-2S subunit (fbcF) HPSH_08095 1577875 - 1579113 + | ubiquinol cytochrome c oxidoreductase, cytochrome b subunit (fbcH) HPSH_08100 1579110 - 1579967 + | ubiquinol cytochrome c oxidoreductase, cytochrome c1 TERM 1433 1580027 - 1580044 + T 72 -4.9 -4.69559 | gap 1, overlap 1580027 GCGGGTTGTTTGAAT GG-CGTTT TCA AAACGACC TTTATTTTAGGATTT HPSH_08105 1580507 - 1580172 - | hypothetical protein HPSH_08110 1582796 - 1580949 - | cell division protein TERM 1434 1582676 - 1582663 - G 87 -5.3 -5.40072 | overlap 1582665 GCTTGGGCAAAAAAA GCTTT TTTA AAAGC CACCATTAAAAAAAC fliE 1583281 - 1582952 - | flagellar hook-basal body protein FliE TERM 1435 1583008 - 1583028 + g 72 -8.3 -3.61268 | overlap 1583011 CTTTGTTGCGCACTT CAAGCATGA GTT TCATGCTCG TTTCAGCCTTCCCTA flgC 1583894 - 1583409 - | flagellar basal body rod protein FlgC flgB 1584329 - 1583907 - | flagellar basal body rod protein FlgB TERM 1436 1584545 - 1584558 + G 76 -2.3 -5.47399 | AAATCCTAATGACTA CAGAC AAAA GCCTG TTTTTTTGCGCTTCG TERM 1437 1585638 - 1585652 + G 72 -8.6 -3.53722 | overlap 1585641 GAGCTATGGAGGGAG TTCGCT TTT AGCGAA TTGTATCGCTATAGG HPSH_08130 1584538 - 1585704 + | putative rod shape-determining protein HPSH_08135 1586729 - 1585728 - | hypothetical protein TERM 1438 1585788 - 1585775 - G 70 -3.1 -4.98531 | overlap 1585768 CTTTCAAATCAAAAA CCACT TTAT AGTAG TCTTTAACAATCGCA HPSH_08140 1587935 - 1586928 - | iron(III) ABC transporter, periplasmic iron-binding protein (ceuE) TERM 1439 1586988 - 1586975 - G 70 -3.1 -4.98531 | overlap 1586968 CTTTCAAATCAAAAA CCACT TTAT AGTAG TCTTTAACAATCGCA TERM 1440 1587922 - 1587910 - G 87 -6.3 -5.18297 | overlap 1587905 GAATAAGAAATAAAA GCTTT TTT AAAGC GAGCGATCAGCATGA TERM 1441 1588112 - 1588132 + H 71 -6.3 -4.25104 | opp_overlap 1588112 GGAAAGCATAATAAA TTAAATCTA TTT TAGGTTTAA TTTTGATCCAACAAG TERM 1442 1588289 - 1588304 + G 74 -4.8 -4.75518 | ATGGTGTGATCCTTT TCTTTT GGCC AAAAGA TTTTACTTTTGTATG HPSH_08145 1588174 - 1588770 + | putative peroxidase TERM 1443 1588757 - 1588773 + F 79 -8.1 -3.9642 | opp_overlap 1588757 1588756 ATCTTAAAGAAAATT CCATTAA CCT TTAATGG TTTAATTCGCTGTTT TERM 1444 1588784 - 1588823 + F 79 -3.8 -5.44638 | gap 1, opp_overlap 1588795, overlap 1588785 1588786 AATGGTTTAATTCGC TG-TTTAATCAAGAGAAAC TTC GTTTTTCTTGGTTGAATCC TTTTCTTTTTATTCT TERM 1445 1588785 - 1588822 + F 70 -7.3 -3.83123 | gap 1, opp_overlap 1588795, overlap 1588784 1588786 ATGGTTTAATTCGCT G-TTTAATCAAGAGAAAC TTC GTTTTTCTTGGTTGAATC CTTTTCTTTTTATTC TERM 1446 1588786 - 1588820 + F 87 -11 -3.4503 | opp_overlap 1588795, overlap 1588785 1588784 TGGTTTAATTCGCTG TTTAATCAAGAGAAAC TTC GTTTTTCTTGGTTGAA TCCTTTTCTTTTTAT TERM 1447 1589318 - 1589307 - g 72 -4.4 -4.81551 | CACGGACATTAAAAA CCTT AAAA AAGG ATCAGTGATTGCTGT HPSH_08150 1588915 - 1589730 + | outer membrane protein TERM 1448 1589740 - 1589766 + T 85 -10.3 -3.35813 | gap 1, opp_overlap 1589740, overlap 1589721 TTTTAAACGCAAAAA CGCCTCTTTATC TTAG GATAAAG-GGCG TTCATTCCCATAAAA TERM 1449 1589766 - 1589740 - T 100 -10.3 -4.81249 | gap 1, opp_overlap 1589721 1589740 TTTTAAACGCAAAAA CGCCTCTTTATC TTAG GATAAAG-GGCG TTCATTCCCATAAAA HPSH_08155 1591573 - 1589798 - | penicillin-binding protein 2 (pbp2) TERM 1450 1590277 - 1590267 - G 74 -4.6 -5.00616 | GGCGTGGCCAAAAAA GAGC CTT GCCC AATAGCGGTAATGAG HPSH_08160 1591997 - 1591554 - | hypothetical protein TERM 1451 1591899 - 1591887 - G 79 -3.3 -5.40014 | AAACAAGAATAAAAA CCCAA TCA TAGGG GGTAAAAAAGGCATT engB 1592636 - 1592010 - | GTPase EngB TERM 1452 1592403 - 1592415 + g 70 -2.6 -5.10033 | opp_overlap 1592395 1592390, overlap 1592393 AATCACATTAAAGGT TGCC CTTAA GGCG TTTTCTTTATCTTCC HPSH_08170 1593190 - 1592633 - | hypothetical protein TERM 1453 1592874 - 1592889 + g 76 -9 -3.62859 | opp_overlap 1592867 TTATAAATGAGCTTG TCAGCG CTCC CGCTGA TTTCACGATTATCCT HPSH_08175 1593783 - 1593190 - | hypothetical protein TERM 1454 1593561 - 1593550 - GR 80 -4.4 -5.26875 | TTTGGAATCAAAAAA GATC TCAT GATC GTCGTATTGCAGAGC HPSH_08180 1594252 - 1593758 - | hypothetical protein HPSH_08185 1595196 - 1594249 - | rare lipoprotein A (rlpA) HPSH_08190 1596308 - 1595196 - | putative regulatory protein TERM 1455 1595696 - 1595715 + g 79 -5 -5.13344 | AGCGGATATACTCTC GTGTCTCT TTAG GGAGATAC TTTTTATCTTCATCT HPSH_08195 1597173 - 1596409 - | DNAse TERM 1456 1597588 - 1597605 + G 75 -5.5 -4.80959 | TGGATTTTTTCATCA GCGCTTC TAAA GAAACGC TTTTATTGTGCGTTG TERM 1457 1597818 - 1597807 - g 78 -3 -5.42259 | CTATTTTGAAAAAAA CAAA AGGG TTTG AAAAAAATTTCTCTT HPSH_08200 1597248 - 1597868 + | riboflavin synthase subunit alpha TERM 1458 1597928 - 1597909 - g 70 -9.3 -3.23393 | overlap 1597907 CTCTAGCCTATAACA TGGGGCA AGATCA TGCCCCA AAAGTGATCGCAAGC HPSH_08205 1597869 - 1598141 + | FlhB-related flagellar biosynthesis protein HPSH_08210 1598163 - 1599146 + | ABC transporter, ATP-binding protein HPSH_08215 1599148 - 1599795 + | ABC transporter, permease protein HPSH_08220 1600415 - 1599984 - | hypothetical protein HPSH_08225 1601021 - 1600425 - | hypothetical protein TERM 1459 1600993 - 1601012 + g 73 -2.2 -5.26875 | overlap 1601010 ACCCATAAGAGTAGG CTCAAA AAAAGACC TTTGAG TTTTTTCATTAAAAC HPSH_08230 1602019 - 1601021 - | undecaprenyl phosphate N-acetylglucosaminyltransferase TERM 1460 1601845 - 1601822 - G 100 -3.2 -6.12458 | opp_overlap 1601822, overlap 1601823 CAAAAAAACAAAAAA CCCCTTAAAA GGCG TTTCAAAAGG TTCAGAATAACAAGC TERM 1461 1601888 - 1601904 + g 76 -9.3 -3.69395 | opp_overlap 1601882 1601881 AAGAAAGATCCCAAG CCCCCCG GCT CGTGGGG TTCTTGCATGATGAA TERM 1462 1601943 - 1601959 + g 71 -3.7 -5.00616 | ATTTTATTAGCGTTA TCCAC AAAGAGC GTGGA TTTTTTAGACCACAA HPSH_08235 1602164 - 1602952 + | pyridoxal phosphate biosynthetic protein PdxJ pdxA 1602954 - 1603877 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 1463 1604571 - 1604555 - g 83 -6.5 -5.0133 | opp_overlap 1604557, overlap 1604557 TATCCCTTTAAAAAA CAGCCAG AAT CTGGCTT TTAGTTTTTCAGGTT TERM 1464 1604569 - 1604557 - g 83 -9.1 -4.13561 | opp_overlap 1604557, overlap 1604555 TCCCTTTAAAAAACA GCCAG AAT CTGGC TTTTAGTTTTTCAGG TERM 1465 1604557 - 1604569 + G 89 -9.1 -4.77757 | opp_overlap 1604557 1604555 TCCCTTTAAAAAACA GCCAG AAT CTGGC TTTTAGTTTTTCAGG TERM 1466 1604761 - 1604773 + G 74 -9.1 -3.53343 | overlap 1604772 TTGTGGGGGGAGCGA GCCAG AAT CTGGC TTTAAGAAAGGCGTT HPSH_08245 1603941 - 1604963 + | O-sialoglycoprotein endopeptidase TERM 1467 1605070 - 1605049 - f 76 -4.5 -5.09173 | gap 1, opp_overlap 1605053, overlap 1605053 CAAGAGCTTAAAAAA GAGAGCGTTA AAA CAACGCT-TC AATTTTAGTCAAATT TERM 1468 1605427 - 1605444 + G 74 -4.1 -5.0538 | AATAATTTAGATGTC GCCATTA CGGG TAAAGGC TTTTTTCAAGTCCAG flgG 1605142 - 1605930 + | flagellar basal body rod protein FlgG HPSH_08265 1606873 - 1606736 - | hypothetical protein HPSH_08270 1607459 - 1607319 - | hypothetical protein TERM 1469 1607389 - 1607400 + g 72 -4.4 -4.77757 | TGGCTATTTTTTTGA CAAC TTTC GTTG TTTTGATTTTTAGCA TERM 1470 1607508 - 1607487 - R 100 -9.5 -5.56372 | AAATTAAAATAAAAA CTAGATGCA TTTT CGCATCTAG GTCCCCATTCTATAC HPSH_08275 1608305 - 1607544 - | hypothetical protein