TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.649096 %AT, 1443297 nt, 7500 terms. Intergenic: 0.681664 %AT, H2T: 119729 nt, 631 terms; T2T: 23516 nt, 267 terms; H2H: 32642 nt, 591 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|195952380|ref|NC_011126.1| Hydrogenobaculum sp. Y04AAS1, complete genome (length 1559514) TERM 1 589 - 576 - g 70 -2.5 -5.08824 | CTCTGATGTAAAAAA TAAAA CCGC TTTTA AAGAAGGTATATCTT HY04AAS1_0001 265 - 1599 + | chromosomal replication initiator protein DnaA HY04AAS1_0002 2403 - 1600 - | protein of unknown function DUF81 TERM 2 1745 - 1724 - G 80 -5.9 -5.01732 | AACCCGCCTAAAAAA CCACCTATT AGAT AACAGATGG CTATGAGAAAATCCA TERM 3 1980 - 1990 + g 74 -4 -5.18371 | CAATTCCTTCTTTGT GAAA CTC TTTC TTTTCTTTTGTAGAC HY04AAS1_0003 2750 - 2400 - | t-RNA-binding domain protein HY04AAS1_0004 2810 - 4258 + | glycogen/starch synthase, ADP-glucose type HY04AAS1_0005 4258 - 5445 + | dihydropteroate synthase HY04AAS1_0006 5438 - 6184 + | protein of unknown function DUF147 HY04AAS1_0007 7586 - 6189 - | RND efflux system, outer membrane lipoprotein, NodT family TERM 4 6470 - 6491 + g 73 -6.7 -4.18161 | gap 1, overlap 6474 TTTGTCTATAGTTTA GTATGCTTTG AGC CAAAGC-TAC TTTTGACGCTTTGTA TERM 5 6474 - 6488 + g 70 -8.6 -3.1012 | overlap 6470 TCTATAGTTTAGTAT GCTTTG AGC CAAAGC TACTTTTGACGCTTT TERM 6 6653 - 6664 + g 91 -5.8 -5.67063 | opp_overlap 6652 AAGATGGAAAGAAGT TCGC CAAA GCGA TTTTTTTCTCGTAAG TERM 7 7025 - 7041 + g 79 -8.1 -4.086 | TATAATGTGCATTTT CTACTAT TTG ATAGTAG TTGTTTACTGTGTTC HY04AAS1_0008 8679 - 7588 - | secretion protein HlyD family protein TERM 8 7940 - 7929 - G 73 -5.8 -4.41137 | TATAAGTATAATAAA CACC AGAA GGTG ATACATAGTCCCCTT TERM 9 8526 - 8545 + g 71 -5 -4.57837 | opp_overlap 8526, overlap 8543 GTACTGGTTCTATAA TGCCGTTT GCAT AAACGCCA TTTTTAAAAGGGTCT TERM 10 8656 - 8666 + g 74 -4 -5.16206 | AATAGCTAAAGCTAT CAAA ATT TTTG TTTTTGTATTCATTT HY04AAS1_0009 9465 - 8758 - | ABC transporter related HY04AAS1_0010 10609 - 9467 - | protein of unknown function DUF214 TERM 11 11000 - 11020 + r 80 -10.5 -2.74999 | overlap 10997 ATGTAAGTGGCTCCA TTCCTCTGG CTA TCAGAGGAA TCCTGTTAGCAATTA HY04AAS1_0011 11563 - 11078 - | rare lipoprotein A TERM 12 11433 - 11448 + g 71 -9 -3.26787 | opp_overlap 11433 11432 11430 11435, overlap 11430 ACATTTTTAGAATAG CAGTCC CTTT GGACTG TATTAGCTTTTGCTT TERM 13 11488 - 11508 + g 70 -8.3 -3.32233 | opp_overlap 11490, overlap 11486 11483 11490 CGCCAAGAATCAGGA AAGCGCTAA GTA TTAGCGCTA TGTGTTTCCTCATTC TERM 14 11506 - 11490 - G 89 -10.9 -3.89131 | opp_overlap 11488 11486 11483 11490 CCAAGAATCAGGAAA GCGCTAA GTA TTAGCGC TATGTGTTTCCTCAT TERM 15 11490 - 11506 + g 80 -10.9 -3.21671 | opp_overlap 11490, overlap 11488 11486 11483 CCAAGAATCAGGAAA GCGCTAA GTA TTAGCGC TATGTGTTTCCTCAT HY04AAS1_0012 11837 - 12499 + | phosphate uptake regulator, PhoU HY04AAS1_0013 12459 - 14255 + | integral membrane sensor signal transduction histidine kinase HY04AAS1_0014 15384 - 14245 - | major facilitator superfamily MFS_1 TERM 16 14399 - 14382 - G 73 -5.5 -4.58283 | overlap 14383 TAAGGTTTGCAAAAA GTGTGGC GTTT GCCACAG AAAATCCATATATCC TERM 17 14398 - 14383 - G 73 -9 -3.34488 | overlap 14382 AAGGTTTGCAAAAAG TGTGGC GTTT GCCACA GAAAATCCATATATC HY04AAS1_0015 16352 - 15381 - | quinolinate synthetase complex, A subunit HY04AAS1_0016 16463 - 17401 + | ribose-phosphate pyrophosphokinase HY04AAS1_0017 18241 - 17522 - | pseudouridine synthase HY04AAS1_0018 18786 - 18238 - | GTP cyclohydrolase I HY04AAS1_0019 19663 - 18866 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase HY04AAS1_0020 20780 - 19653 - | peptide chain release factor 2 HY04AAS1_0021 20994 - 20782 - | copper ion binding protein TERM 18 20861 - 20877 + g 73 -2.3 -5.38951 | AGTTTTGTCTCGTCG TACTC TACCTCT GAGTA TTTTTTGTCTAGCTT TERM 19 20889 - 20903 + g 70 -6.4 -4.12198 | AGTATTTTTTGTCTA GCTTTG TAT CGAAGC TTTTAACCCCTTCTA HY04AAS1_0022 21885 - 21151 - | hypothetical protein HY04AAS1_0023 22003 - 23157 + | chaperone protein DnaJ HY04AAS1_0024 23147 - 23542 + | transcriptional regulator, MerR family HY04AAS1_0025 23864 - 23571 - | Cupin 2 conserved barrel domain protein HY04AAS1_0026 25242 - 23857 - | UDP-N-acetylglucosamine pyrophosphorylase HY04AAS1_0027 26154 - 25252 - | tRNA synthetase class II (D K and N) TERM 20 25692 - 25708 + g 73 -7.3 -4.09243 | opp_overlap 25687 AAAAAATGACTCCAA GGTATTC CTC GAATGCC TTTTCAAAGGGTGTA HY04AAS1_0028 26801 - 26151 - | exsB protein HY04AAS1_0029 28427 - 26805 - | methyl-accepting chemotaxis sensory transducer HY04AAS1_0030 29304 - 28417 - | Tetratricopeptide TPR_2 repeat protein TERM 21 28831 - 28845 + g 74 -2.8 -5.25803 | overlap 28821 GGTGGGACTTTGAAG GTCTTG TTT TAAGGC TTTTTTATAAAACTT HY04AAS1_0031 29387 - 29803 + | hypothetical protein TERM 22 29945 - 29957 + T 73 -9.1 -2.90725 | opp_overlap 29945 29944 CATTAGATTTGAAAT GCGCT AAT AGCGC TCTAGTGTGCTTTAG TERM 23 29957 - 29945 - T 72 -9.1 -2.78438 | opp_overlap 29945, overlap 29944 CATTAGATTTGAAAT GCGCT AAT AGCGC TCTAGTGTGCTTTAG TERM 24 30023 - 30035 + T 73 -9.1 -2.85668 | opp_overlap 30022 30023 CATTAACTACGAAAC GCGGT TAC ACCGC TCTAGTGTGCCAATG TERM 25 30035 - 30023 - T 73 -9.1 -2.90941 | opp_overlap 30023, overlap 30022 CATTAACTACGAAAC GCGGT TAC ACCGC TCTAGTGTGCCAATG TERM 26 30043 - 30053 + T 71 -6.8 -4.05747 | TACACCGCTCTAGTG TGCC AAT GGCA TTTCTCTGAGCTATG TERM 27 30101 - 30113 + T 73 -9.1 -2.87468 | opp_overlap 30100 30101 CATTAGATTTGAAAT GCGCT AAT AGCGC TCTAGTGTGCTAACA TERM 28 30113 - 30101 - T 72 -9.1 -2.78438 | opp_overlap 30101, overlap 30100 CATTAGATTTGAAAT GCGCT AAT AGCGC TCTAGTGTGCTAACA HY04AAS1_0032 31006 - 30182 - | carboxylesterase TERM 29 30369 - 30385 + g 73 -6.6 -4.21275 | opp_overlap 30372 ATTGTTCCTTTTATA GAAGAC AAATC GTCTTC TTTTGAATGAATTAA TERM 30 30523 - 30534 + g 70 -3 -5.08601 | overlap 30514 TTTTCTCAGATTTCA TCAT CTGT ATGA TTTTTCTTCGCATGG HY04AAS1_0033 32369 - 31008 - | aminotransferase class-III HY04AAS1_0034 32946 - 32317 - | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase HY04AAS1_0035 33512 - 33006 - | Redoxin domain protein HY04AAS1_0036 34489 - 33590 - | 5'-3' exonuclease TERM 31 33811 - 33831 + g 100 -7.7 -5.5762 | CTAACTCCAGATCCT CTTTTGAAG CCT CTTTAAAAG TTTTTTGTATTTCGT HY04AAS1_0037 34984 - 34490 - | protein of unknown function DUF151 TERM 32 35067 - 35087 + r 100 -12.6 -4.21945 | AGATTTTGACATTGC GGCTGTCC TTGTT GGACAGCC TTTATATATATTACT HY04AAS1_0038 35372 - 35103 - | hypothetical protein HY04AAS1_0039 35600 - 35376 - | ferredoxin HY04AAS1_0040 36291 - 35611 - | pyruvate/ketoisovalerate oxidoreductase, gamma subunit HY04AAS1_0041 37169 - 36303 - | thiamine pyrophosphate protein domain protein TPP-binding HY04AAS1_0042 38369 - 37200 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein TERM 33 38312 - 38337 + g 74 -9.9 -2.72799 | gap 1, opp_overlap 38308 38307, overlap 38308 CAGTTATAAATTTCT TCT-CTCTTGGA GCT TCCAAGAGAAGA TAATCTGTGTCAACA HY04AAS1_0043 39098 - 38385 - | CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit HY04AAS1_0044 40050 - 39298 - | hydrogenase accessory protein HypB HY04AAS1_0045 40432 - 40043 - | HupH hydrogenase expression protein HY04AAS1_0046 42636 - 40426 - | (NiFe) hydrogenase maturation protein HypF TERM 34 40467 - 40487 + g 88 -3.3 -5.88565 | gap 1 CTTGTCCAACGGATA TCCC-ACC ATCACC GGTAGGGA TTTTTTTGTTGTAAA TERM 35 40905 - 40917 + g 80 -6.3 -4.96848 | TCTTTAATTCTTTTT CTTCA AAA TGAAG TTTTTCTATCAAAGG HY04AAS1_0047 42977 - 42633 - | hydrogenase nickel insertion protein HypA HY04AAS1_0048 43965 - 42979 - | hydrogenase expression/formation protein HypE TERM 36 43282 - 43300 + g 82 -10.4 -3.55622 | TAGTATTTCTACTTT TGAGCTTT GAG AAAGCTCA TTTAAAGCGCTTGCA HY04AAS1_0049 45050 - 43956 - | hydrogenase expression/formation protein HypD HY04AAS1_0050 45267 - 45028 - | hydrogenase assembly chaperone hypC/hupF TERM 37 45090 - 45072 - G 76 -6 -4.56597 | opp_overlap 45071 45069 45072 45080 GTGCCTCTTCAAAAA GCTTTAGA CTT TCTAAGGC GTCTTCTTCAGAAAG TERM 38 45284 - 45272 - R 71 -5.5 -4.68124 | GCAAGACACATAAAA CCTCC TTA GGAAG ATGAAGGTATTTTTT HY04AAS1_0051 45777 - 45277 - | hydrogenase maturation protease TERM 39 45500 - 45488 - G 73 -5.5 -4.61527 | AAAACCTCGGAAAAA CCCAC CTC ATGGG CCGATAGTTTATTCT HY04AAS1_0052 46469 - 45774 - | Ni/Fe-hydrogenase, b-type cytochrome subunit HY04AAS1_0053 48363 - 46462 - | nickel-dependent hydrogenase large subunit TERM 40 47242 - 47266 + g 73 -9.3 -2.77109 | overlap 47241 GTTTGGATATTGATA CCAAGAGTGCG TTA CCCATTCTTGG ATTATGTCTGGATTT HY04AAS1_0054 49437 - 48367 - | hydrogenase (NiFe) small subunit HydA HY04AAS1_0055 49700 - 51844 + | methyl-accepting chemotaxis sensory transducer HY04AAS1_0056 51854 - 53233 + | hypothetical protein HY04AAS1_0057 53766 - 53236 - | hypothetical protein TERM 41 53781 - 53761 - G 70 -2.7 -5.2197 | overlap 53763 TATAAAAATTAAAAA TCTCATATT ATA AATATAAAA CTTTTGATATGTGTT HY04AAS1_0058 53808 - 54536 + | hypothetical protein HY04AAS1_0059 56569 - 54665 - | protein of unknown function DUF255 HY04AAS1_0060 57534 - 56614 - | phosphoesterase DHHA1 HY04AAS1_0061 59111 - 57534 - | RNA binding S1 domain protein TERM 42 57988 - 58001 + g 81 -5.3 -5.1287 | CGTGCGTTTTTAAGC CAAGA CATA TCTTG TTTTTTCACTATGCC TERM 43 58180 - 58193 + g 75 -5.3 -4.73108 | TTATCTTTGTCTATT CTTGT TACA ACAAG TTTTAGTTTTGTGCC TERM 44 58811 - 58822 + g 76 -2.2 -5.55769 | overlap 58805 TTGATTCTACTATAA CATC TATA GGTG TTTTTTGTTCTAACG HY04AAS1_0062 59377 - 59219 - | hypothetical protein HY04AAS1_0063 60137 - 59382 - | MazG family protein TERM 45 60378 - 60364 - H 76 -6.4 -4.70515 | GATAGCCAAAACAAA CAGCTC CCG AAGCTG AACTCTCTCTCGCTG TERM 46 60387 - 60412 + H 73 -9 -2.84344 | overlap 60399 60406 GAAGCTGAACTCTCT CTCGCTGCTT AACTAA AAGCAGCGCG TCCTTGCTGGTTTTG HY04AAS1_0064 60800 - 61264 + | hypothetical protein TERM 47 61581 - 61561 - g 74 -9.7 -2.69799 | overlap 61558 TTAGCGTATATACCA CCTCTAGAG CAA CTCAAGAGG CCGATGTGATAATGA HY04AAS1_0065 61362 - 62363 + | ketol-acid reductoisomerase HY04AAS1_0066 62360 - 62983 + | CDP-alcohol phosphatidyltransferase TERM 48 63244 - 63258 + G 90 -8.6 -4.3739 | opp_overlap 63243 63241 63239 63244, overlap 63232 CTACGGCAAACATAC CGTTTG ATG CAAACG TTTTATCAAAGGATG HY04AAS1_0067 62976 - 63644 + | 5-amino-6-(5-phosphoribosylamino)uracil reductase HY04AAS1_0068 63675 - 63932 + | hypothetical protein TERM 49 64218 - 64205 - g 70 -5.3 -4.53119 | AAAGAACATAACAAA CCTAT TGTA ATAGG CACTACTGGGTTTGA HY04AAS1_0069 63929 - 64717 + | Dihydrodipicolinate reductase HY04AAS1_0070 64714 - 65238 + | HNH endonuclease HY04AAS1_0071 65293 - 65484 + | ribosomal protein L28 TERM 50 65693 - 65681 - g 78 -7.7 -4.24342 | opp_overlap 65681 TTTTCGATGAAGAAA GCCTT AAA AAGGC TTTTGAACAAGAAAA TERM 51 65681 - 65693 + G 76 -7.7 -4.07568 | opp_overlap 65681 TTTTCGATGAAGAAA GCCTT AAA AAGGC TTTTGAACAAGAAAA HY04AAS1_0072 65536 - 66447 + | NAD-dependent epimerase/dehydratase HY04AAS1_0073 67596 - 66424 - | phosphate-selective porin O and P TERM 52 67584 - 67614 + g 78 -6.2 -4.88918 | CAAATATTTGAAGTT TAAGGCCAGC CATAACATCCT GCTGGCCTTG TTTTATTTCAAATGA HY04AAS1_0074 67942 - 67679 - | nitrogen-fixing NifU domain protein HY04AAS1_0075 68580 - 67957 - | Superoxide dismutase HY04AAS1_0076 69223 - 68636 - | molybdopterin-guanine dinucleotide biosynthesis protein A HY04AAS1_0077 70184 - 69216 - | Lytic transglycosylase catalytic HY04AAS1_0078 72216 - 70234 - | general secretion pathway protein D TERM 53 71827 - 71838 + g 80 -2.2 -5.61596 | GGTTTCTATAGAGGG GCTT GGAA AGGC TTTTTTTGTAACACT TERM 54 71874 - 71899 + g 78 -4.1 -5.28983 | opp_overlap 71852 71867, overlap 71852 71867 TAAAAGAAGATGCTT CTTTTAGAGGA AGTA TCTTGTAAAAG TTTTTATATTTTACA TERM 55 71964 - 71952 - G 76 -3.3 -5.40474 | opp_overlap 71952, overlap 71954 AGCTCGTTAAAAAAA GATGC CAA GCGTC TTCTACGCTTACAGG TERM 56 72177 - 72165 - G 72 -4.1 -5.00846 | CAAACACTATAAAAA TCCAT AAA ACGGA AAATATATTCAAACA HY04AAS1_0079 72431 - 72835 + | S-adenosylmethionine decarboxylase proenzyme TERM 57 72955 - 72923 - g 91 -9.2 -4.46581 | overlap 72925 72926 TAAAAGCCGACAAAA CATCTTTGGAGCCA TTCTT CGGCTCCAAAGCTA TAAATATTGTTGCTA TERM 58 72953 - 72925 - g 83 -9.6 -3.82551 | overlap 72923 72926 AAAGCCGACAAAACA TCTTTGGAGCCA TTCTT CGGCTCCAAAGC TATAAATATTGTTGC TERM 59 72952 - 72926 - g 90 -13.1 -2.88446 | overlap 72925 72923 AAGCCGACAAAACAT CTTTGGAGCCA TTCTT CGGCTCCAAAG CTATAAATATTGTTG HY04AAS1_0080 72829 - 73830 + | SMF family protein HY04AAS1_0081 73823 - 74482 + | protein of unknown function DUF558 HY04AAS1_0082 74519 - 76174 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein HY04AAS1_0083 76181 - 77275 + | hypothetical protein HY04AAS1_0084 77396 - 78196 + | hypothetical protein HY04AAS1_0085 78216 - 79223 + | putative sulfate-binding protein TERM 60 79254 - 79233 - f 75 -8 -3.58801 | gap 1, opp_overlap 79234 79236, overlap 79221 79236 AGATAATTTCTCAAA CTAGCCCGC TTAAG GCGGGCT-G TTCTTATTAATCTAT TERM 61 79234 - 79254 + F 93 -11.1 -4.02163 | opp_overlap 79221 79233 79236, overlap 79236 GATAATTTCTCAAAC TAGCCCGCT TAA GGCGGGCTG TTCTTATTAATCTAT TERM 62 79236 - 79252 + F 93 -11.5 -3.59107 | opp_overlap 79233 79236, overlap 79234 TAATTTCTCAAACTA GCCCGCT TAA GGCGGGC TGTTCTTATTAATCT TERM 63 79252 - 79236 - f 83 -10.8 -2.9162 | opp_overlap 79236 79234, overlap 79233 TAATTTCTCAAACTA GCCCGC TTAAG GCGGGC TGTTCTTATTAATCT TERM 64 79447 - 79468 + F 87 -10.1 -3.91144 | overlap 79448 CCTCCCAAGATTTTT TGCACCGCA TCCT TGCGGTGCC TTTCTAAGATATGAA TERM 65 79448 - 79467 + F 100 -13.6 -2.94365 | overlap 79447 CTCCCAAGATTTTTT GCACCGCA TCCT TGCGGTGC CTTTCTAAGATATGA HY04AAS1_0086 79479 - 80222 + | ABC transporter related TERM 66 80350 - 80337 - gf 74 -3.9 -5.10601 | opp_overlap 80337 AGAAAAGGATAAAAA GTTTT ATAA AAAAC TTATAGATAGAATAT HY04AAS1_0087 80215 - 81468 + | CBS domain containing protein TERM 67 81508 - 81522 + GF 74 -7.2 -4.07687 | opp_overlap 81491 AGACAACGTTTGTCT TAGTTG TAA CAACTA TTTTAAGCCGACGCT HY04AAS1_0088 81425 - 82123 + | hypothetical protein HY04AAS1_0089 82156 - 84036 + | acetate/CoA ligase TERM 68 84538 - 84548 + G 75 -5.4 -4.87291 | GACAGAAAATACTTA GCTT TGA AAGC TTTTTGGTTAACATC HY04AAS1_0090 84037 - 85557 + | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase HY04AAS1_0091 85619 - 86767 + | 2-nitropropane dioxygenase NPD HY04AAS1_0092 86768 - 87100 + | hypothetical protein HY04AAS1_0093 87097 - 87378 + | hypothetical protein HY04AAS1_0094 87375 - 87773 + | hypothetical protein HY04AAS1_0095 87770 - 88906 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 69 90132 - 90118 - g 71 -5 -4.70659 | overlap 90119 TTTTATATCCAAAAA CTTAGC ACA GCTAAA GAGCAATGGAGAATG HY04AAS1_0096 89036 - 90628 + | transposase, IS605 OrfB family HY04AAS1_0097 90661 - 91845 + | phosphoribosylglycinamide formyltransferase 2 TERM 70 93568 - 93555 - g 70 -3.1 -5.06961 | ATCAAGAAAAAGAAA GCTCT TAGA AAAGC AAAAAGAAGGTAAAA HY04AAS1_0098 91855 - 93654 + | GTP-binding protein LepA HY04AAS1_0099 93651 - 94748 + | lysine 2,3-aminomutase YodO family protein HY04AAS1_0100 94906 - 95247 + | hypothetical protein HY04AAS1_0101 95259 - 95582 + | hypothetical protein TERM 71 95602 - 95618 + F 100 -7.9 -5.63517 | overlap 95603 TATGGTGTTACTGGG GGTGGGG AGC CCCCACA TTTTTTGTTTAGGAG TERM 72 95603 - 95617 + F 100 -11.4 -3.97026 | overlap 95602 ATGGTGTTACTGGGG GTGGGG AGC CCCCAC ATTTTTTGTTTAGGA HY04AAS1_0102 95641 - 96027 + | Sterol-binding domain protein TERM 73 97064 - 97045 - g 76 -5.8 -4.70659 | gap 1, overlap 97047 GCTTACAGGCAAAAA TTC-TCCAC CTT GTGGAAGAA AAAGAATTTGAAAGG HY04AAS1_0103 96036 - 97595 + | PAS modulated sigma54 specific transcriptional regulator, Fis family HY04AAS1_0104 98800 - 97733 - | lipid-A-disaccharide synthase TERM 74 97825 - 97815 - G 72 -4 -5.00616 | opp_overlap 97815 TTTTCTCTTAAAAAA GAAA GGT TTTC TCTCATAGCGTTTAC TERM 75 98178 - 98193 + g 73 -6.2 -4.45485 | GCCAGAGGTATTAGG CTTTTC ATAT GAAAAG TTTTATAAATATAAT TERM 76 98618 - 98608 - G 73 -5.4 -4.62069 | TTCTTATCTTAAAAA CCTT TGG AAGG ACTTCTATTATGCCC HY04AAS1_0105 99194 - 98793 - | hypothetical protein TERM 77 99355 - 99377 + G 74 -4.8 -4.73388 | CCTCTGTGATAGCGT CTTTGGTGAC TAC GTTGCCGGAG TTTTTGGTGCCACTT HY04AAS1_0106 99225 - 100184 + | sodium/calcium exchanger membrane region TERM 78 100262 - 100251 - g 74 -4.4 -5.04868 | CTAAACTAAAGAAAA GAGA TGTA TCTC GTATAATAAATATGT HY04AAS1_0107 100181 - 100489 + | histone family protein DNA-binding protein HY04AAS1_0108 100611 - 101108 + | pilin HY04AAS1_0109 101177 - 101467 + | ribosomal protein L21 HY04AAS1_0110 101471 - 101734 + | ribosomal protein L27 HY04AAS1_0111 101727 - 102344 + | transcriptional regulator, TetR family TERM 79 103633 - 103623 - g 70 -6.8 -4.11773 | AAACATTCTGCAAAA TGCC AAA GGCA ATACCAAGGAAAGAC HY04AAS1_0112 102331 - 104379 + | glycoside hydrolase family 57 TERM 80 105544 - 105530 - g 70 -5.7 -4.3953 | TTTAATGATAATAAA CCTCT CCGGT AGAGG CGATAAGGATGTAAA HY04AAS1_0113 104394 - 105593 + | tryptophan synthase, beta subunit HY04AAS1_0114 105910 - 105596 - | hypothetical protein HY04AAS1_0115 106092 - 106370 + | MoaD family protein HY04AAS1_0116 107235 - 106339 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 81 106396 - 106421 + g 88 -11.3 -3.75332 | overlap 106399 AGTTCTTATTGGTGT GAAGGTGGTTT TTTG AAACCATCTTC TTTGCCTTGAAGCAT TERM 82 106399 - 106418 + g 73 -7.2 -4.0098 | overlap 106396 TCTTATTGGTGTGAA GGTGGTTT TTTG AAACCATC TTCTTTGCCTTGAAG TERM 83 106469 - 106481 + g 75 -9.1 -3.58177 | overlap 106465 ATTATATTTTCTATA GCCTC TTT GAGGC TTGATTTACCTTCTA HY04AAS1_0117 107627 - 107226 - | protein of unknown function UPF0079 HY04AAS1_0118 108723 - 107800 - | MCP methyltransferase, CheR-type HY04AAS1_0119 109457 - 108699 - | tRNA (guanine-N1)-methyltransferase HY04AAS1_0120 109668 - 109450 - | ATP synthase protein I HY04AAS1_0121 110735 - 109665 - | prephenate dehydratase HY04AAS1_0122 110992 - 110732 - | hypothetical protein HY04AAS1_0123 111058 - 111939 + | protein-export membrane protein SecF HY04AAS1_0124 112003 - 112119 + | hypothetical protein TERM 84 112647 - 112657 + G 72 -4 -5.00616 | opp_overlap 112647 TAGAGCTCAACAAAG CTTT GGA AAAG TTTTTTGAAAAACCA HY04AAS1_0125 112247 - 113533 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase HY04AAS1_0126 113585 - 113743 + | hypothetical protein TERM 85 113748 - 113772 + T 95 -10.7 -4.69326 | opp_overlap 113752, overlap 113749 AGAAACAATAATGTG AGAAGCGGGTT GTA AGCCCGCTTCA TTTTATATTAAATAT TERM 86 113749 - 113771 + T 100 -14.2 -3.40511 | opp_overlap 113752, overlap 113748 GAAACAATAATGTGA GAAGCGGGTT GTA AGCCCGCTTC ATTTTATATTAAATA TERM 87 113768 - 113752 - T 71 -7.9 -3.4015 | opp_overlap 113749 113748 ACAATAATGTGAGAA GCGGGTT GTA AGCCCGC TTCATTTTATATTAA HY04AAS1_0127 114533 - 113775 - | protein of unknown function DUF81 HY04AAS1_0128 115203 - 114601 - | dTMP kinase HY04AAS1_0129 116660 - 115203 - | replicative DNA helicase HY04AAS1_0130 117299 - 116697 - | protein of unknown function DUF374 TERM 88 116906 - 116924 + g 84 -7.5 -4.67942 | opp_overlap 116909 TTCTTGTTTTTTGAG CAAGGTA AACGA TACCTTG TTTTACTTTCTTGGG TERM 89 117317 - 117336 + r 82 -7.8 -4.66953 | opp_overlap 117319, overlap 117319 AAATTTGAATTTGGA AAGGGGCT TAAA AGCCCCTA TTTTTAGCATATTAG TERM 90 117319 - 117334 + r 89 -10.4 -3.9442 | opp_overlap 117319, overlap 117317 ATTTGAATTTGGAAA GGGGCT TAAA AGCCCC TATTTTTAGCATATT TERM 91 117334 - 117319 - R 87 -10.4 -3.60971 | opp_overlap 117319 117317 ATTTGAATTTGGAAA GGGGCT TAAA AGCCCC TATTTTTAGCATATT HY04AAS1_0131 118757 - 117348 - | glutamine synthetase, type I TERM 92 118696 - 118674 - G 78 -9.2 -3.55444 | overlap 118675 CTGCCATTGGCCAAA CGGATCTGAA AAT CTCAGATCCA CATACTCAATGCCTT TERM 93 118695 - 118675 - G 76 -10.5 -2.73124 | overlap 118674 TGCCATTGGCCAAAC GGATCTGAA AAT CTCAGATCC ACATACTCAATGCCT HY04AAS1_0132 119132 - 118794 - | nitrogen regulatory protein P-II TERM 94 119210 - 119229 + r 70 -8 -3.06492 | opp_overlap 119222, overlap 119208 ATCACTGGTATTATT TGTTAACA AAAT TGTTAACA TGTTAACATACATCA HY04AAS1_0133 120174 - 119266 - | molybdenum cofactor biosynthesis protein C HY04AAS1_0134 121013 - 120171 - | purine phosphorylase family 2 HY04AAS1_0135 121799 - 121047 - | polysaccharide deacetylase HY04AAS1_0136 122702 - 121866 - | hypothetical protein HY04AAS1_0137 123561 - 122695 - | D-alanine/D-alanine ligase TERM 95 123155 - 123168 + g 79 -8.1 -4.13767 | opp_overlap 123149 123155 AGCCCAAAACTAGAA CCAGC AGAA GCTGG TTTTGCAATACAAGG TERM 96 123168 - 123155 - G 74 -8.1 -3.68761 | opp_overlap 123155, overlap 123149 AGCCCAAAACTAGAA CCAGC AGAA GCTGG TTTTGCAATACAAGG HY04AAS1_0138 124400 - 123552 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 97 124692 - 124682 - g 78 -5.4 -5.06451 | opp_overlap 124682 124691 TATTACTCTAAAAAA TCAG CCG CTGA TAATATATATATAGA HY04AAS1_0139 124472 - 125518 + | putative PAS/PAC sensor protein HY04AAS1_0140 125515 - 126105 + | diguanylate cyclase HY04AAS1_0141 126128 - 126970 + | diguanylate phosphodiesterase TERM 98 127052 - 127038 - f 74 -8.6 -3.322 | opp_overlap 127013 AGTTGGATAGAGCAA GGGATT TCT AATCCC TAGGCCGGGGGTTCG HY04AAS1_0142 127113 - 127388 + | ribosomal protein S15 TERM 99 127531 - 127545 + G 75 -7.2 -4.18161 | opp_overlap 127528 TGTATCAGAAGAGCC TCTATG TGG CATAGA TTTTGCACCTTTATC HY04AAS1_0143 127391 - 129502 + | Polyribonucleotide nucleotidyltransferase HY04AAS1_0144 129506 - 129940 + | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut TERM 100 130433 - 130419 - g 71 -4.2 -4.72272 | TGGTGTTATGAAAAA CATAGC AAA GCCACG AAAAGAACTTGGAAT TERM 101 130683 - 130698 + G 70 -2.6 -5.08255 | gap 1 CATGTTTGAATTTGA TCC-TAC AGA GTATGGA TTTTCTTTTCAAAAT TERM 102 130912 - 130900 - g 70 -3.4 -5.00616 | GTGTTTTCTAAAAAA GCTT TAAAT AAGC TACAAAGTTTGATAG HY04AAS1_0145 129937 - 130950 + | anthranilate phosphoribosyltransferase TERM 103 131535 - 131517 - g 100 -9 -4.72272 | overlap 131528 TTTTTTTATGAAAAA CTAAAGAA CAA TTCTTTAG AGAATGAGATATTTA HY04AAS1_0146 130947 - 131684 + | protein of unknown function DUF178 HY04AAS1_0147 132880 - 131681 - | ATP-dependent Clp protease, ATP-binding subunit ClpX HY04AAS1_0148 133499 - 132882 - | ATP-dependent Clp protease, proteolytic subunit ClpP HY04AAS1_0149 134856 - 133486 - | trigger factor domain HY04AAS1_0150 135419 - 135039 - | endoribonuclease L-PSP TERM 104 135393 - 135373 - G 80 -9.7 -3.61517 | opp_overlap 135374, overlap 135374 ATCGCTTGGGAATAA GGCCCCAAA GGT TTTGGGGCT TTTGGTGTAAATATT TERM 105 135392 - 135374 - G 90 -13.2 -2.76696 | opp_overlap 135374, overlap 135373 TCGCTTGGGAATAAG GCCCCAAA GGT TTTGGGGC TTTTGGTGTAAATAT TERM 106 135374 - 135392 + g 100 -13.2 -4.36262 | opp_overlap 135374 135373 TCGCTTGGGAATAAG GCCCCAAA GGT TTTGGGGC TTTTGGTGTAAATAT HY04AAS1_0151 136501 - 135416 - | cell division protein FtsZ TERM 107 135589 - 135573 - G 79 -10.9 -3.08032 | opp_overlap 135573, overlap 135570 TTTTCTTCAAAATCA GTGGCTA CTA TAGCCAC TTTTGTATTTTGACC TERM 108 135573 - 135589 + g 100 -10.9 -4.89567 | opp_overlap 135573 135570 TTTTCTTCAAAATCA GTGGCTA CTA TAGCCAC TTTTGTATTTTGACC TERM 109 136035 - 136051 + g 76 -2.3 -5.49579 | opp_overlap 136035 136037, overlap 136037 TTGTGTATCACAATA TATGTAT CGC ATACATC TTTTATTTTTTGTAA TERM 110 136185 - 136171 - G 77 -10 -3.28712 | CCGCTTGGGCTATAA CAGGAG CTG CTCCTG TGCCTGTGCCACCTC HY04AAS1_0152 138462 - 136690 - | ABC transporter domain protein TERM 111 138353 - 138337 - G 78 -3.7 -5.33785 | AATTATCACAAAAAA CAAAAGC CAA GCTTTTT TCTTTTCTTCCGAAT HY04AAS1_0153 139182 - 138475 - | flagella basal body P-ring formation protein FlgA HY04AAS1_0154 139973 - 139182 - | flagellar basal-body rod protein FlgG HY04AAS1_0155 141325 - 140030 - | hypothetical protein TERM 112 141246 - 141229 - G 84 -9.9 -3.68024 | opp_overlap 141228 TGCCGTAATATACAA GCATAGC ACCT GCTATGC CTATTACAAAAAGCA HY04AAS1_0156 142248 - 141337 - | hypothetical protein TERM 113 141412 - 141430 + g 71 -9 -3.12446 | TTGAGAATTTACGCC TATGATAG CCT CTATCATA TTACATGAGTTTGTA HY04AAS1_0157 142579 - 142232 - | pilin TERM 114 142533 - 142513 - G 76 -7.5 -4.11216 | opp_overlap 142514, overlap 142499 142514 142528 CCCCTATTGCTAAAA GGGCGATGG ATA CCATCACCT CTGTGACAGTAAGCC TERM 115 142532 - 142514 - G 79 -11 -3.06515 | opp_overlap 142514, overlap 142499 142513 142528 CCCTATTGCTAAAAG GGCGATGG ATA CCATCACC TCTGTGACAGTAAGC HY04AAS1_0158 143985 - 142609 - | argininosuccinate lyase HY04AAS1_0159 144755 - 143982 - | cytochrome c assembly protein TERM 116 144260 - 144226 - G 72 -3.8 -4.98672 | opp_overlap 144232, overlap 144227 144230 GTTAAAAATATAAAA CTCATATTTATAGACA ATC TTTCTATAAATATTAA AGTATATATAGGAAC TERM 117 144280 - 144291 + g 100 -3 -6.14618 | opp_overlap 144280 TATATAGGAACGTAA GTTT TTGA AAAC TTTTTTTGTTTTATC TERM 118 144583 - 144562 - G 82 -6.7 -4.91511 | gap 1, opp_overlap 144567, overlap 144569 ATGTTACCAGAAAAA GCAACTATAG CAT CTAT-GTTGC TAAAAGCGACCCCAG TERM 119 144716 - 144705 - G 74 -4.4 -5.04601 | opp_overlap 144675, overlap 144706 TGTATAAAGCAAAAA GCTT ATAA AAGC CATAAGGTAAAATAG HY04AAS1_0160 145957 - 144752 - | MiaB-like tRNA modifying enzyme YliG HY04AAS1_0161 147077 - 145959 - | Methionine adenosyltransferase TERM 120 146922 - 146898 - G 78 -10.7 -2.98088 | opp_overlap 146902, overlap 146882 146890 CTGCAAATCTACATA TGCAGAGGAAG AGA CTTCCCCTGCT ATAAATACAATGTTG HY04AAS1_0162 148029 - 147070 - | bifunctional phosphoglucose/phosphomannose isomerase HY04AAS1_0163 148114 - 148395 + | acylphosphatase TERM 121 148964 - 148947 - gf 81 -2.7 -5.64274 | overlap 148950 TCACCTATAAAAAAA TTATAGC AAGA GCTAAAA AGCGTTATAAAGAAC HY04AAS1_0164 148358 - 149419 + | Peptidase M23 HY04AAS1_0165 149458 - 149979 + | Inorganic diphosphatase HY04AAS1_0166 149976 - 150935 + | KpsF/GutQ family protein HY04AAS1_0167 150932 - 151576 + | CDP-alcohol phosphatidyltransferase TERM 122 151586 - 151602 + G 83 -5.9 -5.1286 | opp_overlap 151586, overlap 151592 AAATAGATTCATGAA GCTTTTT ATA AAGAAGC TTTTTATACTTTTTG TERM 123 152207 - 152223 + G 72 -9.5 -2.61582 | opp_overlap 152206, overlap 152206 TTATAAAAACACTAC CTTCATG CTT CATGAAG CTTCTAACTACGATA HY04AAS1_0168 151581 - 153419 + | hypothetical protein HY04AAS1_0169 153422 - 153796 + | flagellar basal body rod protein FlgB HY04AAS1_0170 153811 - 154221 + | flagellar basal-body rod protein FlgC HY04AAS1_0171 154224 - 154529 + | flagellar hook-basal body complex subunit FliE HY04AAS1_0172 154537 - 156039 + | flagellar M-ring protein FliF HY04AAS1_0173 156052 - 157017 + | flagellar motor switch protein FliM TERM 124 157087 - 157077 - g 81 -5.4 -5.098 | GAAAAAGAAAACAAA GTAG AAC CTAC ACCTCAAAACGATGA HY04AAS1_0174 157017 - 157466 + | flagellar motor switch protein FliN HY04AAS1_0175 158387 - 157467 - | 1-phosphofructokinase HY04AAS1_0176 159286 - 158384 - | deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase TERM 125 159161 - 159171 + g 74 -4 -5.21709 | ATAAAAATCTTTATT TAGA TGT TCTA TTTTTTGGTCTCCGG HY04AAS1_0177 159836 - 159279 - | hypothetical protein TERM 126 159812 - 159796 - G 70 -8.1 -3.38134 | ACAAAAGCACAGGAA GTTATGA GTA TCATAAC AAAGGCCAAAAGAAT HY04AAS1_0178 160750 - 159833 - | Mammalian cell entry related domain protein TERM 127 159923 - 159936 + g 88 -5.3 -5.46276 | TTTTATTAGAATCCT CATCT CTTT AGATG TTTTTTGTATATCTT TERM 128 160231 - 160247 + g 71 -4.5 -4.87273 | TGTTGTCAAACAACG TATCAAA TTT TTTGGTA TTTTTGTAGGATGTT HY04AAS1_0179 161477 - 160743 - | ABC transporter related HY04AAS1_0180 162457 - 161474 - | protein of unknown function DUF140 HY04AAS1_0181 162477 - 162947 + | hypothetical protein HY04AAS1_0182 162944 - 163870 + | cobalamin synthesis protein P47K HY04AAS1_0183 163878 - 164294 + | hypothetical protein HY04AAS1_0184 165169 - 164282 - | hypothetical protein HY04AAS1_0185 165864 - 165166 - | hypothetical protein TERM 129 165405 - 165391 - G 70 -2.8 -5.0925 | overlap 165399 TGCCAAAAGCAAAAA CCCATA AAC CATAGG GCATGGTAAAAACCC HY04AAS1_0186 166052 - 165861 - | transcriptional antiterminator, BglG HY04AAS1_0187 166517 - 166140 - | hypothetical protein HY04AAS1_0188 167208 - 166537 - | putative transcriptional acitvator, Baf family TERM 130 166693 - 166707 + g 70 -6.4 -4.00323 | AAGCTCTTTTGCTAT GCCGTA TGC TATGGC TTCTTGTGTGTTTGA HY04AAS1_0189 168674 - 167205 - | inosine-5'-monophosphate dehydrogenase TERM 131 168110 - 168122 + g 74 -4.1 -5.12474 | overlap 168118 CTTTACCTTCGTCGT CTACT ATA GGTAG TTTTTCTATCTTGTG TERM 132 168165 - 168179 + g 91 -10 -4.371 | CTCAGTGGCATCTTC GAGGGA TAT TCCCTC TTTTGCTGTGATGAG TERM 133 168491 - 168502 + g 73 -5.8 -4.53163 | CGCCTTTTCTTGCCA TGGC TATA GCCA TTTTGTACTCTGTGA HY04AAS1_0190 168775 - 168966 + | twin-arginine translocation protein, TatA/E family subunit TERM 134 169112 - 169096 - g 90 -8.7 -4.41348 | overlap 169097 TTTGGTGCAAATAAA CTGCCAG AGG CTGGCAA AGGTTTAGGAGAAGG TERM 135 169111 - 169097 - g 77 -10 -3.24488 | overlap 169096 TTGGTGCAAATAAAC TGCCAG AGG CTGGCA AAGGTTTAGGAGAAG HY04AAS1_0191 169021 - 169209 + | twin-arginine translocation protein, TatA/E family subunit HY04AAS1_0192 169212 - 169772 + | putative chemotaxis phosphatase, CheZ HY04AAS1_0193 169786 - 170169 + | response regulator receiver protein TERM 136 170697 - 170682 - g 70 -5.4 -4.41548 | CCAGAGCGTATAAAA GAGCTT TTTA AAGCCC TAAAACCCGGTGAGG TERM 137 171869 - 171855 - g 73 -5.7 -4.58663 | opp_overlap 171847 AGTATGGTGCAAAAA TGCAG TTCAT CTGCA AGTGCAATATTTGAA HY04AAS1_0194 170187 - 172055 + | methyl-accepting chemotaxis sensory transducer TERM 138 172291 - 172275 - g 72 -9.4 -2.72144 | overlap 172274 TTACTTGCTTTAAAC GCTGCC ATAGA GGCAGC TAGAGTCGGTGAAGT HY04AAS1_0195 172077 - 172442 + | methyl-accepting chemotaxis sensory transducer HY04AAS1_0196 172455 - 173495 + | response regulator receiver modulated CheW protein TERM 139 173610 - 173598 - g 72 -4.1 -5.01535 | TTAGAATTAGAAAAA GATCC TAC GAATC AAGAAATTTTAAACA TERM 140 173709 - 173695 - g 70 -6.4 -4.01888 | ATCCTATAGTAGAAA CTGCTC ATA AAGCAG AAGATATACTTGGTA HY04AAS1_0197 173499 - 175562 + | CheA signal transduction histidine kinase TERM 141 175577 - 175589 + F 73 -9.1 -2.80796 | opp_overlap 175577, overlap 175576 ATGTTGTTTGATAGA GCGCT ATC AGCGC GTTTCGATGCTAAAG TERM 142 175589 - 175577 - f 73 -9.1 -2.87211 | opp_overlap 175577 175576 ATGTTGTTTGATAGA GCGCT ATC AGCGC GTTTCGATGCTAAAG HY04AAS1_0198 175669 - 176382 + | biotin/acetyl-CoA-carboxylase ligase TERM 143 176431 - 176421 - g 74 -4 -5.18355 | opp_overlap 176421 GGCAAAAATGAAAAA TCTT AAA AAGA TGTTAAAGACTTCAG TERM 144 176627 - 176607 - g 74 -4.7 -4.75063 | overlap 176608 176610 ACAAAAGCTCAAAAA CTATGAAGC AGA GCTTCAAAA CCTTCAAAGGGAGAT TERM 145 176624 - 176610 - g 71 -8.6 -3.26839 | overlap 176608 176607 AAAGCTCAAAAACTA TGAAGC AGA GCTTCA AAACCTTCAAAGGGA HY04AAS1_0199 176413 - 176925 + | outer membrane chaperone Skp (OmpH) HY04AAS1_0200 176922 - 177896 + | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase HY04AAS1_0201 178954 - 177893 - | permease-like TERM 146 178252 - 178274 + g 75 -5.6 -4.77047 | CGTCTGGGGTTTTTA TCCAAAGGTT CAA ATCTTTTGGA TTTATTTCTGTTTTA HY04AAS1_0202 179805 - 178954 - | protein of unknown function DUF114 HY04AAS1_0203 180575 - 179835 - | DNA polymerase III delta' subunit HY04AAS1_0204 181521 - 180577 - | aminodeoxychorismate lyase HY04AAS1_0205 181876 - 181505 - | Holliday junction resolvase YqgF HY04AAS1_0206 183418 - 181895 - | protein of unknown function DUF1703 HY04AAS1_0207 185776 - 183458 - | diguanylate cyclase with PAS/PAC sensor TERM 147 183516 - 183548 + g 70 -5.6 -4.38712 | overlap 183519 TAAAGAGCTTCGTCT GCACGTTTTAAAAG CGTTT CTTTTGTATCGTGC TTTTCTAACGATGCC TERM 148 183594 - 183608 + g 75 -7.2 -4.31835 | GTTACGTTGATCCCT TCTTCA AAA TGAAGA TTTCTTATAAGACTT TERM 149 185042 - 185028 - G 71 -4.3 -4.87665 | GTGTATCCATAAAAA TCAAG AGCAG CTTGA TTGGCGTTTGCTATG HY04AAS1_0208 188616 - 185773 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 150 188026 - 188041 + g 76 -7.6 -4.13711 | overlap 188032 TTCTTCCAGTTCCAA GGCTTT TATA AAAGCC TTTATACTATTTTGA HY04AAS1_0209 190912 - 188690 - | diguanylate phosphodiesterase TERM 151 190291 - 190310 + g 79 -10.8 -3.03338 | ACTCAATGTGGCTTT GCATCTCA GCTT TGAGATGC TCTTCAGAAACTTCT HY04AAS1_0210 191040 - 191273 + | hypothetical protein HY04AAS1_0211 191242 - 191796 + | hypothetical protein TERM 152 192221 - 192233 + G 70 -3.3 -5.00851 | AAAGGTGAGGTTAGT GCTAC GAA GGAGC TTTTGTTTGCTTCCT HY04AAS1_0212 191807 - 192931 + | cell cycle protein TERM 153 193010 - 192999 - g 70 -3 -5.07652 | opp_overlap 192999 GCTTTTAAAAGAAAA GAAT ATAA ATTC TTTCTATGTGGGCTC HY04AAS1_0213 192913 - 193980 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 154 194669 - 194655 - g 70 -8.6 -3.05844 | opp_overlap 194654 TTTGCTAGGTCAAGA CGGTAT AAA ATACCG CTATCTCTATGCATG HY04AAS1_0214 193977 - 195065 + | diguanylate cyclase HY04AAS1_0215 195107 - 195571 + | NADH-quinone oxidoreductase, E subunit HY04AAS1_0216 195546 - 196823 + | NADH dehydrogenase (quinone) TERM 155 196877 - 196863 - g 76 -4.2 -5.1764 | GATATAATACAAAAA GGCTAT GAC AAAGCC CCGCATAGATCTTTA TERM 156 197531 - 197515 - g 73 -6.5 -4.34866 | overlap 197516 ACCCAAGAAGAGAAA TGCTTGC AAG GCAAGCT GCTAGACAAGTAGTA TERM 157 197530 - 197516 - g 77 -10 -3.19835 | overlap 197515 CCCAAGAAGAGAAAT GCTTGC AAG GCAAGC TGCTAGACAAGTAGT HY04AAS1_0217 196839 - 198503 + | dihydroxy-acid dehydratase TERM 158 199330 - 199342 + G 79 -6.9 -4.38712 | opp_overlap 199329 199330 ATTCCTACAAGAAAC GCCCG TAC TGGGC TTTTATACACATCAA HY04AAS1_0218 198514 - 199644 + | queuine tRNA-ribosyltransferase HY04AAS1_0219 199661 - 199813 + | hypothetical protein HY04AAS1_0220 200503 - 199850 - | 3-dehydroquinate dehydratase, type I HY04AAS1_0221 201660 - 200503 - | Chorismate synthase HY04AAS1_0222 202929 - 201964 - | hypothetical protein TERM 159 202970 - 202950 - R 89 -8.5 -4.65263 | opp_overlap 202949 202954 ACCTCCTAAAATAAA TTTATGTTA TTA TAACATAAA ATATATGTGGTATTA TERM 160 203152 - 203162 + r 74 -6.8 -4.21974 | overlap 203160 AGGACTTGATAAGTG TGCC GAA GGCA TTTCTTACATCGTGA HY04AAS1_0223 203871 - 203362 - | hypothetical protein HY04AAS1_0224 204667 - 204251 - | dinitrogenase iron-molybdenum cofactor biosynthesis protein HY04AAS1_0225 204981 - 204754 - | hypothetical protein TERM 161 205181 - 205167 - R 70 -4.2 -4.99645 | overlap 205162 205168 ACCCCAGAAATAAAA TGCGAT TTC ATCGCT CTGCCTGTTCTTTTA TERM 162 205180 - 205168 - R 73 -7.7 -3.58703 | overlap 205162 205167 CCCCAGAAATAAAAT GCGAT TTC ATCGC TCTGCCTGTTCTTTT TERM 163 205343 - 205355 + r 71 -7.7 -3.44205 | opp_overlap 205342 205343 GCTACGATGTAAAAT GCGAT TGT ATCGC TCTATTTGCTTTTTA HY04AAS1_0226 205491 - 205357 - | hypothetical protein TERM 164 205547 - 205532 - R 100 -10.4 -5.30448 | AAATAAATATAAAAA GAGGGC AAAA GCCCTC CAAGTATTTTGATTA HY04AAS1_0227 206144 - 205560 - | hypothetical protein HY04AAS1_0228 206350 - 206156 - | hypothetical protein HY04AAS1_0229 206975 - 206397 - | hypothetical protein TERM 165 207064 - 207079 + H 72 -2.6 -5.37171 | AAGTCCAACATATAA TATGGT ATAT ATCATA TTTTTCTTTGATGTT HY04AAS1_0230 207147 - 208079 + | ADP-L-glycero-D-manno-heptose-6-epimerase HY04AAS1_0231 208076 - 209041 + | cysteine synthase B HY04AAS1_0232 209043 - 209558 + | protein of unknown function DUF177 TERM 166 209550 - 209540 - g 79 -3.2 -5.58074 | TAAGGAGGAAAAAAA TGGC GGT ACCA AAGCGTAGGACTTCT HY04AAS1_0233 209539 - 209721 + | ribosomal protein L32 HY04AAS1_0234 209733 - 210752 + | fatty acid/phospholipid synthesis protein PlsX TERM 167 211191 - 211202 + G 76 -5.8 -4.59773 | opp_overlap 211191, overlap 211186 ATTGGACCGATAGGA GCAC CTGT GTGC TTTTTGGAGATGGGG TERM 168 211494 - 211481 - g 78 -6.7 -4.56597 | TCGTTGGCGCAAAAA CTTGG TGTT CCAAG TTCAAAAGTTTATGT HY04AAS1_0235 210752 - 211663 + | 3-oxoacyl-(acyl-carrier-protein) synthase III HY04AAS1_0236 211665 - 212078 + | hypothetical protein HY04AAS1_0237 212146 - 212715 + | oxidoreductase molybdopterin binding HY04AAS1_0238 213620 - 212718 - | Ppx/GppA phosphatase TERM 169 213452 - 213466 + g 81 -2.8 -5.77677 | overlap 213453 AATCTTTTAAAGTTT CCAAAG CTT CTTTGA TTTTTTCTTCTTTTA HY04AAS1_0239 213838 - 213623 - | hypothetical protein HY04AAS1_0240 214746 - 213835 - | ATPase associated with various cellular activities AAA_3 TERM 170 213862 - 213877 + g 88 -4.8 -5.48213 | CTCTTTTACTATCTC TTCTAT TATA ATAGAA TTTTTCTTTTGGGTG HY04AAS1_0241 216689 - 214767 - | diguanylate cyclase HY04AAS1_0242 216907 - 216815 - | hypothetical protein HY04AAS1_0243 217001 - 217282 + | hypothetical protein TERM 171 217259 - 217269 + F 74 -6.8 -4.24002 | AAAGATAGATTGTTA GGGA GTA TCCC TTTTGGCCTTTGAGG HY04AAS1_0244 217272 - 217943 + | recombination protein RecR TERM 172 217946 - 217956 + T 71 -6.8 -4.08164 | AAAAAGGGAATAGTG TGCC AAA GGCA TTTCTCTGAGCTTTT TERM 173 218004 - 218016 + T 73 -9.1 -2.85351 | opp_overlap 218003 218004 CATTAGATCCGAAAC GCGCT GAT AGCGC TCTAGTGTGCCAAAG TERM 174 218016 - 218004 - T 72 -9.1 -2.78438 | opp_overlap 218004, overlap 218003 CATTAGATCCGAAAC GCGCT GAT AGCGC TCTAGTGTGCCAAAG TERM 175 218024 - 218034 + T 71 -6.8 -4.08164 | GATAGCGCTCTAGTG TGCC AAA GGCA TTTCTCTGAGCTTTT TERM 176 218158 - 218170 + T 73 -9.1 -2.85668 | opp_overlap 218157 218158 CTTTAGCTTTGAAAC GCGCT GAT AGCGC TCTAGTGTGCCGATG TERM 177 218170 - 218158 - T 72 -9.1 -2.73124 | opp_overlap 218158, overlap 218157 CTTTAGCTTTGAAAC GCGCT GAT AGCGC TCTAGTGTGCCGATG HY04AAS1_0245 219350 - 218271 - | twitching motility protein TERM 178 218437 - 218454 + g 76 -4.2 -5.18371 | GATTGCATCAAAGCG TAAGCT TGTGGT AGCTTA TTTTCTTTTATCAAA HY04AAS1_0246 221061 - 219379 - | type II secretion system protein E HY04AAS1_0249 222085 - 221582 - | hypoxanthine phosphoribosyltransferase TERM 179 222142 - 222159 + H 71 -7.7 -3.55444 | opp_overlap 222137, overlap 222149 TGTGCTATAATTTAA GGCTACA TTTT TGTGGCC TTTAAAAGCTACAAA TERM 180 222355 - 222385 + H 77 -3.8 -5.36689 | opp_overlap 222340 GCTGCCTTCCAAGCA GCAGGCTGCGGG TTCGAGT CCCGTCGTCCGC TTTTGTTTTTAGTTT TERM 181 222451 - 222435 - H 82 -10.9 -2.62616 | overlap 222437 TCAGTCGGTAGAGCA CACCCTT GGT AAGGGTG AGGTCGCCGGTTCAA HY04AAS1_0250 222513 - 223730 + | translation elongation factor Tu TERM 182 223831 - 223816 - g 71 -4.6 -4.81752 | AAAAACAGGCAAAAA CATCCC CAAA GGGTTG AAATAAGGAAGCATT HY04AAS1_0251 223741 - 223890 + | ribosomal protein L33 TERM 183 224016 - 224000 - g 70 -5.3 -4.45083 | TTTAGATGGATAAAA TTTTAAA TTT TTTAAAA GAAGTAAAGCAAGAG HY04AAS1_0252 223990 - 224190 + | preprotein translocase, SecE subunit HY04AAS1_0253 224187 - 224924 + | NusG antitermination factor TERM 184 225086 - 225103 + G 75 -9.1 -3.55889 | opp_overlap 225085 CAAAAGATATGGAAC CCGGTAC TATT GTGCCGG TTGTGATTAGTATAT TERM 185 225186 - 225152 - g 70 -5.7 -4.48987 | overlap 225154 CGTTTATAATGAAAA CACCGCCTACTTC TTTCTTGTT GAAGAAGGCGGCA AAGGTCCAAAAGGGC TERM 186 225184 - 225154 - g 77 -8.3 -3.85296 | overlap 225152 TTTATAATGAAAACA CCGCCTACTTC TTTCTTGTT GAAGAAGGCGG CAAAGGTCCAAAAGG HY04AAS1_0254 224935 - 225372 + | ribosomal protein L11 HY04AAS1_0255 225378 - 226103 + | ribosomal protein L1 TERM 187 226185 - 226173 - g 73 -3.4 -5.19328 | opp_overlap 226173 226179 AGGTTATAAGAAAAA GCTT ACCAA AAGC AATTTTGTATTGTTT HY04AAS1_0256 226117 - 226653 + | ribosomal protein L10 HY04AAS1_0257 226680 - 227063 + | ribosomal protein L7/L12 TERM 188 227108 - 227098 - f 74 -6.8 -4.25256 | opp_overlap 227098 227103 GTTTTATTAAAAGAA GGTG ATG CACC CCATGTTAGGGGTGC TERM 189 227103 - 227124 + F 100 -11.6 -4.86862 | opp_overlap 227098, overlap 227098 ATTAAAAGAAGGTGA TGCACCCC ATGTTA GGGGTGCA TTTTGCTTTTTTCAA HY04AAS1_0258 227173 - 231585 + | DNA-directed RNA polymerase, beta subunit HY04AAS1_0259 231585 - 236276 + | DNA-directed RNA polymerase, beta' subunit TERM 190 236425 - 236394 - g 81 -3.6 -5.4659 | gap 1, overlap 236400 236401 GAAGATAAAGAAAAA GAGTAAGGCTCCTGC TTT GCAGG-GCAATCCTC AGAAAAGAGGCGTTT HY04AAS1_0260 236341 - 236748 + | ribosomal protein S12 HY04AAS1_0261 236748 - 237230 + | ribosomal protein S7 HY04AAS1_0262 237245 - 239323 + | translation elongation factor G HY04AAS1_0263 239337 - 240554 + | translation elongation factor Tu HY04AAS1_0264 240565 - 240879 + | ribosomal protein S10 HY04AAS1_0265 240884 - 241582 + | ribosomal protein L3 TERM 191 241884 - 241873 - g 76 -4.4 -5.07941 | AAAAGTACAGAAAAA TAGC TCTT GCTA TGGCTCTTAGCACAA HY04AAS1_0266 241584 - 242186 + | ribosomal protein L4/L1e HY04AAS1_0267 242183 - 242482 + | Ribosomal protein L25/L23 HY04AAS1_0268 242493 - 243359 + | ribosomal protein L2 TERM 192 243447 - 243437 - g 76 -3.2 -5.25803 | opp_overlap 243415, overlap 243416 AAGCTTTATAAAAAA GCTC AAA AAGC TTATAAAAAGGTTAG TERM 193 243578 - 243560 - g 86 -4.5 -5.63517 | opp_overlap 243542 TTTGTAAACAAAAAA GCTTGGG TAGAT CCAAAGC TATGGGCGACGATAA HY04AAS1_0269 243359 - 243820 + | ribosomal protein S19 HY04AAS1_0270 243830 - 244195 + | ribosomal protein L22 HY04AAS1_0271 244195 - 244890 + | ribosomal protein S3 HY04AAS1_0272 244895 - 245320 + | ribosomal protein L16 HY04AAS1_0273 245317 - 245517 + | ribosomal protein L29 HY04AAS1_0274 245514 - 245792 + | ribosomal protein S17 HY04AAS1_0275 245845 - 246210 + | ribosomal protein L14 TERM 194 246460 - 246447 - g 80 -6.7 -4.7416 | opp_overlap 246446 246447 CCAAAATGCGAAAAA CCTAC AAGA GTAGG CTTTAGAATAGAAGA HY04AAS1_0276 246210 - 246566 + | ribosomal protein L24 HY04AAS1_0277 246572 - 247135 + | ribosomal protein L5 HY04AAS1_0278 247145 - 247333 + | ribosomal protein S14 HY04AAS1_0279 247345 - 247755 + | ribosomal protein S8 HY04AAS1_0280 247768 - 248313 + | ribosomal protein L6 HY04AAS1_0281 248325 - 248693 + | ribosomal protein L18P/L5E TERM 195 248979 - 248962 - g 74 -2.7 -5.27023 | ATGCTAAAAAGAAAA CCATAAG AGTT CCTATAG TAAATGGCACTATAC HY04AAS1_0282 248703 - 249272 + | ribosomal protein S5 HY04AAS1_0283 249276 - 249455 + | ribosomal protein L30 TERM 196 249825 - 249815 - g 70 -2.6 -5.18357 | GAAGTCACTAAAAAA TTTA AGG TAAA AGTAGATGCTATATC HY04AAS1_0284 249452 - 249910 + | ribosomal protein L15 TERM 197 251182 - 251168 - g 80 -5.8 -5.03201 | AATAATAACTAAAAA GTATAA AGC TTATAC GAGGAAAAAGTGATG HY04AAS1_0285 249903 - 251195 + | preprotein translocase, SecY subunit TERM 198 251423 - 251435 + G 74 -4.9 -4.78764 | TTAACTGAGGCTCCT CATAA AAA TTATG TTTTTGATGGGTTTC HY04AAS1_0286 251195 - 251830 + | Nucleoside-triphosphate--adenylate kinase HY04AAS1_0287 251827 - 252600 + | methionine aminopeptidase, type I HY04AAS1_0288 252602 - 252844 + | translation initiation factor IF-1 HY04AAS1_0289 252854 - 252967 + | ribosomal protein L36 HY04AAS1_0290 252982 - 253362 + | ribosomal protein S13 TERM 199 253618 - 253594 - g 81 -2.9 -5.63504 | overlap 253595 AAGGCTATAAAAAAA GCTGTAAAC GAATACG GTTTACAGG AAGCAGAGGTTTGGG TERM 200 253727 - 253702 - g 74 -4 -5.07652 | overlap 253704 GGCGTTAAAATAAAA GCTATAAGGG ACGTTA CCCCTATACC TCATAACGGTTGTAG HY04AAS1_0291 253375 - 253767 + | ribosomal protein S11 HY04AAS1_0292 253771 - 254394 + | RNA-binding S4 domain protein HY04AAS1_0293 254405 - 255364 + | DNA-directed RNA polymerase, alpha subunit HY04AAS1_0294 255369 - 255725 + | ribosomal protein L17 HY04AAS1_0295 255722 - 255958 + | protein of unknown function YGGT HY04AAS1_0296 255985 - 257292 + | signal recognition particle protein HY04AAS1_0297 257410 - 257646 + | ribosomal protein S16 HY04AAS1_0298 257660 - 257899 + | hypothetical protein HY04AAS1_0299 258023 - 259117 + | DEAD/DEAH box helicase domain protein TERM 201 259179 - 259190 + T 78 -5.8 -4.83615 | overlap 259187 TTTTACTTTATGTGT TCGC TTTT GCGA TTTTTGTAAGCGCTG TERM 202 259280 - 259250 - T 77 -3.2 -5.61881 | opp_overlap 259250, overlap 259254 GCTGAAAAATAAAAA CTATGGGGTGCTTA TGT TAAGTACGCCCCAG CTATCTTTGTCATTG HY04AAS1_0300 260029 - 259250 - | Phosphomethylpyrimidine kinase HY04AAS1_0301 260742 - 260026 - | ABC transporter related TERM 203 260169 - 260191 + g 87 -2 -6.09196 | overlap 260171 GCTCAAAGACGTTGT GATCGGTA ATGAGTA TACCGATG TTTTTTTCTTTTAGA TERM 204 260197 - 260216 + g 87 -2.2 -6.06529 | overlap 260199 TATACCGATGTTTTT TTCTTTTA GATC TAAAAGCA TTTTTTTTATATCTG HY04AAS1_0302 261311 - 260748 - | hypothetical protein TERM 205 261085 - 261103 + g 73 -8.9 -3.34192 | opp_overlap 261073 261084, overlap 261091 AAAGCCCCACAAACG GGACATC TGTCT GATGTCC TTACTTCAGAAGGTT TERM 206 261470 - 261456 - g 74 -4.3 -5.0538 | opp_overlap 261459, overlap 261459 TTGCATGCCAAAAAA CTACT CTTTT AGTAG AGATTTTACGATAGT HY04AAS1_0303 261379 - 262083 + | hypothetical protein HY04AAS1_0304 262085 - 264298 + | Methyltransferase type 11 TERM 207 264626 - 264616 - g 75 -5.4 -4.84311 | opp_overlap 264616 TCTTATAGAATAAAA GCTT ATA AAGC TTGGATAACCCCCAT HY04AAS1_0305 264295 - 264945 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein HY04AAS1_0306 264942 - 265415 + | pantetheine-phosphate adenylyltransferase TERM 208 265911 - 265927 + G 91 -9.5 -4.53636 | opp_overlap 265911 TGGAAATTTAAAGAA GCTTCTT GGC AAGAAGC TTTTAATTATATGAT TERM 209 265927 - 265911 - g 85 -9.5 -4.05026 | opp_overlap 265911 TGGAAATTTAAAGAA GCTTCTT GGC AAGAAGC TTTTAATTATATGAT HY04AAS1_0307 265542 - 268358 + | molybdopterin oxidoreductase HY04AAS1_0308 268377 - 269048 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 210 269295 - 269312 + G 78 -4.1 -5.37043 | overlap 269297 TTGCTTATACATATG CTCAAAC CTTG GTTTGCG TTTTTTGTATGGACT HY04AAS1_0309 269061 - 269960 + | Polysulphide reductase NrfD TERM 211 270114 - 270135 + G 86 -10.2 -4.04806 | CCGTAGAAGCCTCTT CATGCACC CTTTGC GGTGCATG TTCTTTAGTATGCCC TERM 212 270534 - 270524 - g 70 -5.4 -4.35958 | GTATTAAACAAAGAA GAAC TAT GTTC TAATAAAATACCTTT HY04AAS1_0310 269954 - 270919 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 213 270933 - 270921 - f 74 -6.3 -4.46514 | ATTTATTGAAATAAA TTGTC ATT GACAA TAATCAAATCATTGA TERM 214 272005 - 272021 + G 74 -9.5 -3.10134 | opp_overlap 271999 271998, overlap 272004 272015 272017 GAGATTAACGCTATA TCCTCTA TGA TAGAGGA GTTTTCCGCTACTTT HY04AAS1_0311 270982 - 272643 + | methyl-accepting chemotaxis sensory transducer TERM 215 273003 - 272993 - g 70 -3.2 -5.07053 | overlap 272998 AATCATTGTAAAAAA CGCA AGA TACG ATTTGGTATCTAAAG HY04AAS1_0312 272640 - 273530 + | conserved hypothetical protein-like HY04AAS1_0313 274255 - 273500 - | RNA methyltransferase, TrmH family, group 3 HY04AAS1_0314 274980 - 274249 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase HY04AAS1_0315 275327 - 274977 - | hypothetical protein HY04AAS1_0316 276654 - 275320 - | MATE efflux family protein TERM 216 275378 - 275367 - G 76 -4.4 -5.0917 | CTACCAAAAAACAAA TAGC CCTT GCTA CGGTTTCAACACTCA HY04AAS1_0317 277393 - 276725 - | hypothetical protein HY04AAS1_0318 277569 - 277913 + | cytochrome c class I TERM 217 277924 - 277938 + T 82 -8.5 -4.01853 | opp_overlap 277923 277921 277924 ATTAATCACCAAGAG CCCCC TTTTT GGGGG TTTATAATAATATTA TERM 218 278060 - 278043 - T 100 -11.3 -4.91977 | overlap 278038 TATGAAAAGACAAAA GGCTCTC TTTT GAGAGCC CTAACAACGTTAAAA HY04AAS1_0319 279551 - 278070 - | hypothetical protein TERM 219 279513 - 279503 - G 72 -8.2 -3.51924 | CCGCCAGCGAGAGAA GGCC CAA GGCC CCGTAAACCATCCGT TERM 220 279630 - 279645 + H 72 -4.8 -4.86902 | overlap 279618 279631 ATTTATATATTTCAT GTAAAT GTAT ATTTAC TTTTATTGTAATTTC HY04AAS1_0320 279867 - 280178 + | Rhodanese domain protein TERM 221 280344 - 280325 - g 73 -7.2 -4.03888 | CATCCACAAGAACAA GGCTTTCT TTTG AAAAAGCC GCCAAGAATTTGGGT HY04AAS1_0321 280180 - 281046 + | aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain HY04AAS1_0322 281057 - 281926 + | PSP1 domain protein HY04AAS1_0323 281926 - 282498 + | protein of unknown function DUF152 TERM 222 283389 - 283403 + G 70 -2.8 -5.24129 | CTTACAACCTTGTGG CTTCTT GTG AAGGGG TTTTTTGTGAACCAG HY04AAS1_0324 282548 - 283606 + | threonine synthase HY04AAS1_0325 284211 - 283603 - | chromosome segregation and condensation protein ScpA HY04AAS1_0326 284611 - 284195 - | molybdopterin-guanine dinucleotide biosynthesis MobB region TERM 223 284488 - 284506 + g 71 -5.2 -4.54449 | CTTTATCAAAAACAG CATGGCCT TTG GGGTCGTG TTTTATGTAGGCTAT HY04AAS1_0327 285471 - 284608 - | acetylglutamate kinase TERM 224 284741 - 284751 + g 70 -5.4 -4.4891 | GCAGAGTTTATCTTG GGTA TCA TACC TTTTGTAATAGTACC HY04AAS1_0328 286843 - 285482 - | pyridine nucleotide-disulphide oxidoreductase dimerisation region TERM 225 285934 - 285918 - G 80 -8.7 -3.85704 | opp_overlap 285931, overlap 285911 TGAGCAAGCATCAAA GGCGATG TCA CATCACC GCAGGCGTATATATG HY04AAS1_0329 287075 - 286830 - | hypothetical protein HY04AAS1_0330 288250 - 287075 - | peptidase M16 domain protein TERM 226 287132 - 287146 + g 76 -6.4 -4.42464 | overlap 287139 ATAAACATGCTCTAT GTCTTC TTT GGAGAC TTTGTTTACAAGATT TERM 227 288178 - 288194 + g 77 -8.1 -3.94409 | opp_overlap 288177 GCTCATCCATAGCAC CATCTTT TAA AAAGATG TTTATAGCTACTATA HY04AAS1_0331 289302 - 288253 - | Tetratricopeptide TPR_2 repeat protein HY04AAS1_0332 289442 - 289299 - | hypothetical protein HY04AAS1_0333 290113 - 289439 - | phage shock protein A, PspA HY04AAS1_0334 290483 - 290169 - | putative alkylmercury lyase HY04AAS1_0335 291294 - 290626 - | hypothetical protein HY04AAS1_0336 292147 - 291296 - | hypothetical protein HY04AAS1_0337 293307 - 292159 - | Selenate reductase TERM 228 293227 - 293237 + g 86 -6.8 -5.13016 | GATATTCATTATCAT GGCA AAC TGCC TTTTTGGTTTTGCTT HY04AAS1_0338 296792 - 293328 - | molybdopterin oxidoreductase TERM 229 293634 - 293646 + g 81 -9.1 -4.13767 | GTAAAAAGATTGATA TCCGG TAA CCGGA TTTTCGGCTAAGCCG TERM 230 293651 - 293661 + g 100 -8.2 -5.33026 | CGGTAACCGGATTTT CGGC TAA GCCG TTTTTATTTACCTTG TERM 231 297332 - 297313 - g 70 -6.4 -4.10657 | opp_overlap 297298 CCAGACTGGGGAAAA TCTGGTGT TCTT ACACCGGA ACAAATAAGTGTAAT HY04AAS1_0339 297010 - 298656 + | Hydroxylamine reductase TERM 232 298716 - 298743 + G 77 -8.5 -3.85698 | gap 1 CATTGCTATCCTCCT TCTCCTCTCCAG CAAGT CTGGGG-GGAGA TTTATACAAAGACAA TERM 233 299619 - 299607 - g 80 -9.1 -3.85114 | opp_overlap 299615 299616 AAATTGTATATCAAA CCTCC TTT GGAGG GATGCCTCATCTTGC TERM 234 300196 - 300182 - g 78 -6.4 -4.65078 | ATATCTTTAATAAAA GCTCAG ATA CTAAGC CCAGATCAAACATAT HY04AAS1_0340 298658 - 300331 + | cytochrome d1 heme region HY04AAS1_0341 300331 - 301407 + | Radical SAM domain protein TERM 235 301933 - 301945 + G 85 -4.1 -5.60993 | TTTTAGACGGCGATA GATAC ATT GTGTC TTTTTTTGTGAACGA TERM 236 302421 - 302406 - g 74 -4 -5.093 | opp_overlap 302416 TTTAAAATAATAAAA GAGATA ACCG TACCTC AACCCTCAGGTATCT HY04AAS1_0342 301395 - 302474 + | cytochrome d1 heme region TERM 237 302948 - 302959 + G 78 -5.8 -4.8487 | GGGATAAGATAGTTG GCGT AGAT ACGC TTGTTTTTTTAATGG HY04AAS1_0343 302467 - 303213 + | uroporphyrin-III C-methyltransferase HY04AAS1_0344 303201 - 304214 + | putative transcriptional regulator, AsnC family HY04AAS1_0345 304759 - 304211 - | siroheme synthase TERM 238 304791 - 304810 + H 80 -7.2 -4.56597 | opp_overlap 304808 AATTATTTAATCTTT GCGTTGAT TACA ATCAATGC TTTTTAGAGCAAAAA HY04AAS1_0346 304865 - 305149 + | hypothetical protein TERM 239 306319 - 306329 + G 73 -3.2 -5.09225 | overlap 306314 306316 GGTTTTCTACTTGCA GGAG CAG CTTC TTTTTTGACTAACAT HY04AAS1_0347 305146 - 306369 + | hypothetical protein HY04AAS1_0348 306379 - 306669 + | protein of unknown function DUF59 HY04AAS1_0349 307334 - 306675 - | transcriptional regulator, Crp/Fnr family HY04AAS1_0350 307452 - 307853 + | hypothetical protein TERM 240 308062 - 308043 - g 73 -7.2 -4.11304 | TCAAGGCACAAACAA CACCCTTT ACAC AAAGGATG ATCTAATAAAGGGTA TERM 241 308533 - 308523 - g 70 -6.8 -4.15698 | CACTTATACAAACAA CTGG CCA CCAG AACCAAAAATAGGAT TERM 242 309214 - 309191 - g 76 -2.4 -5.55698 | GACAAGCCAAAAAAA TCACCCCATC TTTG AATGTGATGA TGTGGTCTGCTTTTG HY04AAS1_0351 307876 - 310122 + | Nitric-oxide reductase TERM 243 310143 - 310160 + F 100 -6.9 -6.01725 | overlap 310146 AACCTCTTTGCTTTG GAAGGCC ATCT GGCCTCC TTTTTTATTTTTCTT TERM 244 310146 - 310157 + F 70 -7.2 -3.6144 | overlap 310143 CTCTTTGCTTTGGAA GGCC ATCT GGCC TCCTTTTTTATTTTT TERM 245 310625 - 310648 + G 83 -9.6 -3.86346 | gap 1, opp_overlap 310620, overlap 310628 TTTAAATTTATGCCG CAAGCCCAGCT TAT GGC-GGGCTTG TTTGTAGACCCATGG TERM 246 310673 - 310683 + G 76 -6.8 -4.41237 | overlap 310663 CCATGGTCAAGGGTA TCGC TTG GCGA TTTGTATTCTTTCAT HY04AAS1_0352 310247 - 311593 + | hypothetical protein TERM 247 311600 - 311620 + T 81 -8.9 -3.91369 | overlap 311602 GTATTTTAATTTATT TTTCCCGCC TTT GGCGGGATG TTGTCTTTATACATT TERM 248 311602 - 311618 + T 100 -13.7 -3.53279 | overlap 311600 ATTTTAATTTATTTT TCCCGCC TTT GGCGGGA TGTTGTCTTTATACA TERM 249 311655 - 311679 + T 95 -8.6 -5.16572 | CATAGCTTTGTCTTA GACTGGGC GGATTCAAA GCCCAGTC TTTTTTAACTTAAAT HY04AAS1_0353 312259 - 311684 - | transcriptional regulator, TetR family HY04AAS1_0354 313043 - 312285 - | tRNA methyltransferase complex GCD14 subunit HY04AAS1_0355 313489 - 313043 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein HY04AAS1_0356 314075 - 313491 - | translation elongation factor P HY04AAS1_0357 314823 - 314068 - | protein of unknown function DUF815 HY04AAS1_0358 315692 - 314820 - | dihydrodipicolinate synthase HY04AAS1_0359 317210 - 315729 - | methionyl-tRNA synthetase TERM 250 315952 - 315962 + g 71 -4.6 -4.72986 | TTATTTTTGGCTAAG GTCC AAG GGGC TTTTTCATCCACGTA TERM 251 317017 - 317027 + g 70 -3.2 -5.06414 | overlap 317010 TCGCAAAGCTCTTTT GGAG TCA TTCC TTTTTCTTCAGCGGC HY04AAS1_0360 317266 - 317673 + | hypothetical protein HY04AAS1_0361 317957 - 317670 - | protein of unknown function DUF503 HY04AAS1_0362 318443 - 317994 - | Tetratricopeptide TPR_2 repeat protein HY04AAS1_0363 319468 - 318440 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase HY04AAS1_0364 319911 - 319471 - | thioredoxin HY04AAS1_0365 320648 - 319908 - | protein of unknown function DUF140 HY04AAS1_0366 321547 - 320651 - | hypothetical protein TERM 252 321018 - 321007 - G 74 -4.4 -4.99861 | opp_overlap 320998, overlap 320998 TAGTAACGATAAAAA GATC GATT GATC TTGAAACTCCTTGAA HY04AAS1_0367 321583 - 322464 + | protein of unknown function DUF6 transmembrane HY04AAS1_0368 323438 - 322467 - | UDP-glucose 4-epimerase TERM 253 322525 - 322548 + g 77 -2.6 -5.5208 | gap 1, overlap 322526 322527 322528 AAGTAAGGATCGTCG TAT-TTTGGTT TCC AACCAAAGGTA TTTTTTATCTTATCA TERM 254 323404 - 323428 + g 100 -7.1 -5.55698 | opp_overlap 323407 ATATGAGAGCCTATA TAACCAGCCCC TCC GGTGATGGTTA TTTTTTTCACTTATA HY04AAS1_0369 323885 - 323439 - | ribose 5-phosphate isomerase B HY04AAS1_0370 325288 - 323882 - | glutamyl-tRNA(Gln) amidotransferase, B subunit HY04AAS1_0371 325358 - 327658 + | DNA topoisomerase (ATP-hydrolyzing) HY04AAS1_0372 327655 - 328920 + | seryl-tRNA synthetase HY04AAS1_0373 328917 - 329495 + | Imidazoleglycerol-phosphate dehydratase HY04AAS1_0374 329492 - 330463 + | ADP-ribosylation/Crystallin J1 TERM 255 331293 - 331283 - g 76 -3.2 -5.26316 | CCACTTTAGAAAAAA CTCC GCC GGAA TTGGCTGCCGATATA HY04AAS1_0375 330478 - 331488 + | cell shape determining protein, MreB/Mrl family HY04AAS1_0376 331485 - 332258 + | Cell shape-determining protein-like TERM 256 332343 - 332321 - g 75 -9.2 -3.28712 | TTCTTCTTTTTAGAA GGAAATGGCT TGT ATCCATTTCC AGAAGCATTTTTATC HY04AAS1_0377 332255 - 332695 + | hypothetical protein TERM 257 333599 - 333641 + G 71 -8.7 -3.254 | gap 1, opp_overlap 333640, overlap 333597 TATATCCACCCGGTT CTGT-TTTTAAGGTGCCTAT TGCA ATAGCCGCCTTAAAATACGG TGTTATAACTCCATC HY04AAS1_0378 332692 - 334452 + | penicillin-binding protein 2 HY04AAS1_0379 334476 - 335048 + | electron transport protein SCO1/SenC TERM 258 335038 - 335028 - f 86 -4 -5.71712 | TCTTATATAAAAAAA CTTT TAA AAAG TAAAGGCTAAAATAC HY04AAS1_0380 335104 - 335295 + | hypothetical protein TERM 259 335838 - 335851 + G 86 -5.3 -5.28942 | GCGTGGGGAATAGAC GAAGA GCCA TCTTC TTTTTCTTTGAGGTC HY04AAS1_0381 335292 - 335993 + | two component transcriptional regulator, winged helix family HY04AAS1_0382 335984 - 337147 + | integral membrane sensor signal transduction histidine kinase TERM 260 337142 - 337152 + T 72 -2.6 -5.4433 | overlap 337148 ACGGTTTATATACCG TTTT AGG AAAA TTTTTCTTTATATAT HY04AAS1_0383 338205 - 337144 - | protein of unknown function UPF0118 TERM 261 337850 - 337866 + g 100 -9.5 -5.1287 | TAGTAGGTAATATGT TTGCCAA TGA TTGGCAA TTTTTTGGATATAAG HY04AAS1_0384 338743 - 338189 - | small GTP-binding protein TERM 262 338761 - 338773 + r 70 -6.3 -4.25388 | ACCCAATATGTCGTT TATGG TGT CCATA TTTGATTTTGCTATG HY04AAS1_0385 339915 - 338740 - | tryptophanyl-tRNA synthetase TERM 263 339017 - 339028 + g 73 -2.2 -5.35222 | overlap 339010 TTGCATTTCTCAGGA TGAC CAGG GTCG TTTTTTCTAAGTTTT HY04AAS1_0386 340574 - 339912 - | peptidase M50 HY04AAS1_0387 341287 - 340574 - | protein of unknown function DUF164 HY04AAS1_0388 342337 - 341318 - | Radical SAM domain protein HY04AAS1_0389 342770 - 342387 - | thioesterase superfamily protein HY04AAS1_0390 343615 - 342767 - | methyl-accepting chemotaxis sensory transducer HY04AAS1_0391 344406 - 343627 - | beta-lactamase domain protein HY04AAS1_0392 345179 - 344481 - | hypothetical protein HY04AAS1_0393 346366 - 345173 - | Radical SAM domain protein TERM 264 345396 - 345425 + g 81 -8.7 -4.00587 | gap 1 TTTCTACCGATGCCA GGCACTCTTATGAG CTC TTCGTAAGAG-GCC TTGTTTACATCTATT TERM 265 345429 - 345455 + g 75 -5.3 -4.7373 | overlap 345431 TCGTAAGAGGCCTTG TTTACATCTAT TGGGT ATAGATGTATA TTTTTAATGGCGTAA TERM 266 345431 - 345453 + g 74 -7.9 -3.98658 | overlap 345429 GTAAGAGGCCTTGTT TACATCTAT TGGGT ATAGATGTA TATTTTTAATGGCGT HY04AAS1_0394 347463 - 346405 - | response regulator receiver modulated CheB methylesterase HY04AAS1_0395 348239 - 347469 - | undecaprenol kinase HY04AAS1_0396 348748 - 348236 - | lipopolysaccharide transport periplasmic protein LptA HY04AAS1_0397 349241 - 348738 - | protein of unknown function DUF1239 HY04AAS1_0398 349503 - 349261 - | iron-sulfur cluster-binding protein HY04AAS1_0399 349551 - 350006 + | MotA/TolQ/ExbB proton channel HY04AAS1_0400 349993 - 350388 + | Biopolymer transport protein ExbD/TolR HY04AAS1_0401 350385 - 351209 + | TonB family protein HY04AAS1_0402 351457 - 351206 - | nitrogen-fixing NifU domain protein HY04AAS1_0403 351697 - 351470 - | hypothetical protein HY04AAS1_0404 351952 - 351707 - | SirA family protein HY04AAS1_0405 352979 - 351942 - | thiamine biosynthesis protein HY04AAS1_0406 353445 - 352981 - | nitrogen-fixing NifU domain protein TERM 267 353346 - 353328 - G 73 -5.3 -4.62069 | gap 1, opp_overlap 353328, overlap 353331 CCTTTATGGTAAAAA GCATTGCG TCTC CGCAA-GC TGGGTTTCCACATTG HY04AAS1_0407 354538 - 353528 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 268 353738 - 353727 - G 80 -5.8 -5.00267 | AACCATAAAAATAAA TCCG GTAC CGGA TAAGCTGATATCACG HY04AAS1_0408 355104 - 354535 - | 2'-5' RNA ligase HY04AAS1_0409 355313 - 355101 - | hypothetical protein TERM 269 356173 - 356155 - g 70 -8.2 -3.30239 | overlap 356153 ATTCAAAGAGTAAGA GAGCTTTT AAG AAAAGCCC CAGGTGTAATCCTCA HY04AAS1_0410 355375 - 356382 + | aspartate-semialdehyde dehydrogenase HY04AAS1_0411 356369 - 356719 + | hypothetical protein TERM 270 357059 - 357077 + G 72 -3.8 -5.00616 | opp_overlap 357058 357059, overlap 357059 TAAGAACGCTCAAAG CCTTGG CAAAGGC CCAGGG TTTTTTGCAAAAGAA HY04AAS1_0412 356697 - 357623 + | Protein of unknown function DUF1722 HY04AAS1_0413 357620 - 358036 + | hypothetical protein TERM 271 358869 - 358858 - g 74 -3 -5.28983 | TTTAAAAGAGAAAAA TCTT ATAG AAGA AAAAGAAGGGGCTAT HY04AAS1_0414 358046 - 359665 + | arginyl-tRNA synthetase TERM 272 359835 - 359816 - g 70 -8.6 -2.95091 | overlap 359818 ATGCTAATGCACATA TACGGTCC AGAG GGACCATA TCCAGCAATGAATTA HY04AAS1_0415 359738 - 360469 + | hypothetical protein TERM 273 361114 - 361101 - g 73 -2.4 -5.37171 | AACAGCAAAGAAAAA TCTC AAGAAA GAGA ACAGGCTATCTCAGA HY04AAS1_0416 360924 - 361532 + | hypothetical protein HY04AAS1_0417 362142 - 361552 - | DNA polymerase III, epsilon subunit HY04AAS1_0418 363106 - 362156 - | SurA domain HY04AAS1_0419 364404 - 363142 - | CBS domain containing protein TERM 274 363610 - 363622 + g 72 -4.1 -4.91573 | CTGTAATCCATCAAT TATCG CTA CGGTA TTTTTCATATCTTTT HY04AAS1_0420 364960 - 364391 - | nicotinate (nicotinamide) nucleotide adenylyltransferase HY04AAS1_0421 365754 - 364951 - | protein of unknown function DUF72 HY04AAS1_0422 366950 - 365751 - | hypothetical protein HY04AAS1_0423 367908 - 366931 - | conserved hypothetical gluconokinase HY04AAS1_0424 369769 - 367901 - | ferredoxin HY04AAS1_0425 370433 - 369756 - | orotidine 5'-phosphate decarboxylase TERM 275 370389 - 370399 + g 76 -6.8 -4.53163 | opp_overlap 370388 TAATTCTTTCAAGAT GCTC AAA GAGC TTTTGTCGTCTATGG HY04AAS1_0426 371277 - 370426 - | protein of unknown function DUF86 TERM 276 370946 - 370957 + g 76 -4.4 -5.14477 | TCGTATAGGCAAGAC GGAT CTAT ATCC TTTTTTAAATCTCTA TERM 277 371287 - 371303 + r 72 -2.4 -5.37043 | TTTCATCTTATGTAT TATAAA CTAAT TTTATA TTTTTTGTATGCCGT HY04AAS1_0427 373154 - 371322 - | glucose inhibited division protein A TERM 278 371668 - 371685 + g 77 -8.5 -3.92745 | GATAAAGTATAGGGT TTTGGGT TTTC ACCCAAA TTTATAACGGTTTTT TERM 279 372423 - 372435 + g 76 -3.4 -5.30616 | opp_overlap 372423 TGTATAGGTAATATA GCAA TTTAT TTGC TTTTTATTTGGCTCA HY04AAS1_0428 373687 - 373160 - | hypothetical protein TERM 280 373403 - 373442 + g 70 -2.9 -5.08011 | overlap 373404 373405 AACTAGTTTGTAAAG TTTTGAAGTATCATCTG CCAAAA CTGATGCTACTTCAACG TTTTTTAAAGCTTTT HY04AAS1_0429 374856 - 373684 - | aminotransferase class I and II TERM 281 374160 - 374174 + g 75 -7.2 -4.24283 | opp_overlap 374160 374159, overlap 374157 AGGTTTTGGAAAAAG CGTTTA CTG TAAACG TTATTTGTCTTGCTT HY04AAS1_0430 375536 - 374871 - | sugar fermentation stimulation protein TERM 282 375417 - 375435 + g 73 -7.4 -4.0162 | opp_overlap 375416 375417, overlap 375419 TCCTTTTACCAAAAG CTCTGGAA GTC TTCCAGTG TTTCTAATATGAACA TERM 283 375419 - 375433 + g 75 -8.6 -3.60104 | opp_overlap 375417 375416, overlap 375417 CTTTTACCAAAAGCT CTGGAA GTC TTCCAG TGTTTCTAATATGAA HY04AAS1_0431 377571 - 375526 - | hypothetical protein TERM 284 375553 - 375566 + g 73 -3.1 -5.1471 | TATAAATTCAAAGTC GCTTT CTTC AGAGC TTTGTTTTTTGTAAT TERM 285 377948 - 377908 - g 75 -9.9 -2.83907 | opp_overlap 377908, overlap 377907 GGATATGAATACAAG GCTTTGCCTTCTTAAGAGT AAA AATCTTATAAAAGCAAAGC TTATAATAGTAGAGC TERM 286 378345 - 378364 + G 81 -9.4 -3.74077 | ATAAGGTTAAGTTTT TGGGTTTT AAGA AAAACCCA TTTCCATATGTAAGA HY04AAS1_0432 377624 - 378676 + | glycosyl transferase group 1 HY04AAS1_0433 378686 - 379327 + | phospholipid/glycerol acyltransferase HY04AAS1_0434 379934 - 379320 - | protein of unknown function UPF0126 TERM 287 379930 - 379916 - G 85 -2.8 -5.86976 | overlap 379917 TTATAAAAGAAAAAA CTGACC AAA AGTCAA TCATATATCTTGTGA HY04AAS1_0435 381300 - 379927 - | gid protein TERM 288 380403 - 380429 + g 71 -4.4 -4.88795 | opp_overlap 380408, overlap 380408 TTGTTTGAAATCCCA CCAAAGAAAGGG CTT CTCCTTCTTTTG TTTCTTTTCTTAGCT TERM 289 380408 - 380424 + g 74 -2.9 -5.28281 | opp_overlap 380408, overlap 380403 TGAAATCCCACCAAA GAAAGGG CTT CTCCTTC TTTTGTTTCTTTTCT HY04AAS1_0436 381329 - 382177 + | ATP phosphoribosyltransferase regulatory subunit HY04AAS1_0437 384220 - 382178 - | Organic solvent tolerance protein HY04AAS1_0438 385002 - 384226 - | HAD-superfamily hydrolase, subfamily IIA HY04AAS1_0439 385026 - 385448 + | hypothetical protein HY04AAS1_0440 385471 - 385704 + | hypothetical protein HY04AAS1_0441 385701 - 386198 + | 3-isopropylmalate dehydratase, small subunit HY04AAS1_0442 386173 - 386727 + | orotate phosphoribosyltransferase HY04AAS1_0443 386724 - 387464 + | hemolysin A TERM 290 387891 - 387881 - g 70 -5.4 -4.45115 | AGGAAGATAAAAGAA GCAA TCC TTGC CATAGAGATAACCCA TERM 291 388975 - 388993 + G 73 -7.4 -4.08767 | opp_overlap 388975 TCATGCTTATAAAGA TCCATCTG CCC CGGGTGGA TTTTGGACACCTAGA HY04AAS1_0444 387461 - 390007 + | penicillin-binding protein, 1A family HY04AAS1_0445 389997 - 390755 + | imidazoleglycerol phosphate synthase, cyclase subunit HY04AAS1_0446 391393 - 390809 - | membrane-flanked domain HY04AAS1_0447 391855 - 391406 - | protein of unknown function DUF474 TERM 292 391912 - 391928 + r 75 -9.4 -2.92449 | opp_overlap 391912 TGTATATTGTAAGAA GCTGGC GTAAA GCCAGC TATATAAGATGTTTA TERM 293 391928 - 391912 - R 82 -9.4 -3.66844 | opp_overlap 391912 TGTATATTGTAAGAA GCTGGC GTAAA GCCAGC TATATAAGATGTTTA HY04AAS1_0448 392387 - 391941 - | ribosomal protein L9 HY04AAS1_0449 392619 - 392398 - | ribosomal protein S18 TERM 294 392490 - 392504 + g 73 -7.2 -4.15565 | opp_overlap 392490 CACATACGAAAGTCA TTCTTC TTG GAAGAA TTTTGCCATGCTCAG HY04AAS1_0450 393103 - 392645 - | single-strand binding protein TERM 295 392928 - 392944 + g 73 -6.5 -4.18494 | GTAGATAGTCTATCA GCCAATG CTC CATAGGC TTTTACATCAAAATA HY04AAS1_0451 393454 - 393116 - | ribosomal protein S6 TERM 296 393610 - 393626 + H 71 -8.1 -3.25823 | CACGTTTCAGATACC TGTCTTT TTA AAAGACA TTAATCTCACGACAA HY04AAS1_0452 393777 - 394001 + | hypothetical protein TERM 297 394342 - 394329 - g 73 -5.3 -4.60808 | opp_overlap 394329 GCAGAAAAATACAAA CTAAC CATT GTTAG TTTTGATAAAGATTT HY04AAS1_0453 394008 - 394418 + | PilT protein domain protein TERM 298 395691 - 395674 - g 70 -2.7 -5.07652 | overlap 395676 CGCTGTAAAAGAAAA CATAGTA AGGA TACTAAG AAATGACTGACGGTA HY04AAS1_0454 394499 - 395701 + | protein of unknown function DUF214 HY04AAS1_0455 395694 - 396326 + | ABC transporter related TERM 299 396347 - 396330 - T 87 -7.7 -4.83615 | gap 1, opp_overlap 396331 396334, overlap 396331 396334 TATCTTGGATAAAAA GGAAGGCC AAA GGCC-TCC TTTAAAGTTTATATC TERM 300 396331 - 396347 + T 73 -7.9 -3.75418 | opp_overlap 396330 396331 396334, overlap 396334 ATCTTGGATAAAAAG GAAGGCC AAA GGCCTCC TTTAAAGTTTATATC TERM 301 396347 - 396331 - T 84 -10.1 -3.49687 | opp_overlap 396331 396334, overlap 396330 396334 ATCTTGGATAAAAAG GAAGGCC AAA GGCCTCC TTTAAAGTTTATATC TERM 302 396344 - 396334 - T 77 -8.2 -3.88001 | opp_overlap 396334 396331, overlap 396330 396331 TTGGATAAAAAGGAA GGCC AAA GGCC TCCTTTAAAGTTTAT HY04AAS1_0456 397749 - 396361 - | membrane protein involved in aromatic hydrocarbon degradation HY04AAS1_0457 397954 - 398334 + | Rhodanese domain protein TERM 303 398347 - 398366 + T 88 -8.6 -4.46581 | gap 1, overlap 398349 TGATAAATTTATTTA CA-CCCCCA TTT TGGGGGTTG TTTTATAAGCTTTTA TERM 304 398349 - 398363 + T 100 -11.4 -4.32669 | overlap 398347 ATAAATTTATTTACA CCCCCA TTT TGGGGG TTGTTTTATAAGCTT HY04AAS1_0458 399638 - 398379 - | Arsenical pump membrane protein TERM 305 399594 - 399609 + g 91 -6.2 -5.43514 | opp_overlap 399587 399594, overlap 399587 TCCAACAACAACAGA TATACC AATG GGTATA TTTTTTGGTTGTTTT HY04AAS1_0459 399974 - 399681 - | hypothetical protein HY04AAS1_0460 401052 - 400021 - | glutamate 5-kinase HY04AAS1_0461 401264 - 401061 - | ribosomal protein L35 HY04AAS1_0462 401818 - 401303 - | translation initiation factor IF-3 HY04AAS1_0463 404040 - 401848 - | helicase c2 TERM 306 402047 - 402057 + g 75 -5.4 -4.86001 | AAACCATCCATAGTG TGCT TTA AGCA TTTTTCTGAGCTACT TERM 307 402966 - 402976 + g 74 -2.6 -5.28826 | overlap 402970 TTTCTTTGACGATGT TTAT GAC ATAA TTTTTTATGACGTTT HY04AAS1_0464 405824 - 404040 - | aspartyl-tRNA synthetase HY04AAS1_0465 405891 - 406331 + | hypothetical protein HY04AAS1_0466 406582 - 407133 + | Rieske (2Fe-2S) domain protein TERM 308 408169 - 408143 - g 81 -3.8 -5.59655 | overlap 408145 CAAACGAAGAAAAAA CATTAGAAGC CCAATAC GCTTCTAATC CAAACCCAGCTTTGA TERM 309 408167 - 408145 - g 76 -6.4 -4.40357 | overlap 408143 AACGAAGAAAAAACA TTAGAAGC CCAATAC GCTTCTAA TCCAAACCCAGCTTT TERM 310 408360 - 408346 - g 73 -2.1 -5.252 | TATCTCTATAAAAAA GGTAC TCTTT ATACC AACAAAGCTTTCTTA HY04AAS1_0467 407164 - 408708 + | cytochrome bd ubiquinol oxidase subunit I HY04AAS1_0468 408722 - 409762 + | cytochrome d ubiquinol oxidase, subunit II HY04AAS1_0469 410908 - 409925 - | GTP-binding protein Obg/CgtA TERM 311 410277 - 410301 + g 73 -6.5 -4.2558 | opp_overlap 410277, overlap 410278 ATTCCTGGTATATCA GCGATGGTAAA AGA TTTATCATCGG TTTTAATAACCCCTA TERM 312 410278 - 410300 + g 77 -10 -3.15027 | opp_overlap 410277, overlap 410277 TTCCTGGTATATCAG CGATGGTAAA AGA TTTATCATCG GTTTTAATAACCCCT TERM 313 410756 - 410736 - G 78 -7.7 -4.2349 | CTTTTATATTTAAAA TCCAAAAAC GTT GTTTTTGAA GAATCCGCTTGTAAT HY04AAS1_0470 411920 - 410916 - | glyceraldehyde-3-phosphate dehydrogenase, type I HY04AAS1_0471 412635 - 411955 - | protein of unknown function DUF554 HY04AAS1_0472 412973 - 412635 - | histidine triad (HIT) protein TERM 314 415385 - 415375 - H 77 -3.2 -5.56263 | ACTATAAAAGAAAAA GAGT ATT ACCC TCCTATTATCAATAT HY04AAS1_0475 416267 - 416563 + | hypothetical protein HY04AAS1_0476 417432 - 416542 - | protein of unknown function DUF752 HY04AAS1_0477 418303 - 417383 - | thiamine-monophosphate kinase HY04AAS1_0478 418689 - 418300 - | hypothetical protein TERM 315 418360 - 418377 + g 73 -5.7 -4.61747 | overlap 418358 TAAAAACGAGGATGT TTTAGAA ACCT TTCTAAA TTTTATCCTTCTTGG TERM 316 418589 - 418609 + g 71 -4.7 -4.56597 | opp_overlap 418608 CCATATATCCTACCG GCTAAGTTC TTT GAATCTAGC TTTTTAAAAAGCACA HY04AAS1_0479 419321 - 418683 - | beta-lactamase domain protein TERM 317 418802 - 418790 - GR 84 -4.9 -5.42131 | opp_overlap 418790 GAAGTATAGAAAAAA TCTTT TTT AAAGA CTTTGATAAATCTTC TERM 318 418924 - 418912 - GR 71 -4.7 -4.58943 | opp_overlap 418918, overlap 418909 GGTAGATAAAAACAA CACCC GCC GGGGG TATGACCTGGTGTGT HY04AAS1_0480 419517 - 419278 - | hypothetical protein HY04AAS1_0481 420447 - 419548 - | protein of unknown function DUF58 HY04AAS1_0482 421397 - 420444 - | binding-protein-dependent transport systems inner membrane component TERM 319 421180 - 421168 - G 70 -2.7 -5.15634 | opp_overlap 421153 GATTTTACGAAAAAA TCTAT ATA ACAGA TTTTATTTTTATCCT HY04AAS1_0483 422064 - 421384 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase TERM 320 421928 - 421912 - G 71 -5.2 -4.56597 | TGTGGGTTTTAAAAA CAAAAG TGGTT CTTTTG GTATATCCATATTGA HY04AAS1_0484 425534 - 422088 - | chromosome segregation protein SMC TERM 321 422498 - 422508 + g 85 -4 -5.64304 | overlap 422505 ATACTTTAGCGTATA TTTC TTT GAAA TTTTTTCTTATGTTG TERM 322 423950 - 423964 + g 75 -5.7 -4.80656 | GCCTAGCCCCAGCCG CAGCT TCTAT AGCTG TTTTGTATTCTTCAT TERM 323 424393 - 424413 + g 77 -8.3 -3.99986 | TTTTTCTCTATCTGT TCTATCTCC TCT GGTGATAGA TTTAGCTTTTCTTCG TERM 324 424815 - 424835 + g 88 -4.7 -5.45802 | opp_overlap 424830, overlap 424820 CTCGGAAGTTTTTTG CAAGTCCTT TAG AAGGCTTTG TTTTTCTTTTAAAAG TERM 325 425498 - 425509 + g 74 -3 -5.4251 | CATAGGATTTAAAGT TTGT AACT ACAA TTTTTTCTATGTAGG HY04AAS1_0485 426744 - 425536 - | Argininosuccinate synthase TERM 326 428384 - 428368 - H 76 -9.5 -3.04334 | opp_overlap 428366 428365, overlap 428352 428370 GCAAATATAATGATA TATGCCT AAT AGGCATA GAGTTTAGCAAGAAA TERM 327 428620 - 428602 - g 90 -8.8 -4.57275 | overlap 428604 GAAAAAAAGGGAAAA GGCTGCTC AAG GAGCAGAC ATAATAGACTTAGGT TERM 328 428618 - 428604 - g 73 -10 -2.56715 | overlap 428602 AAAAAAGGGAAAAGG CTGCTC AAG GAGCAG ACATAATAGACTTAG TERM 329 428986 - 428974 - g 79 -4.8 -5.093 | CCTAAAAGAAGAAAA TGGC TTCTT GCCA GATATAGATTCTATA HY04AAS1_0487 428522 - 429685 + | aminotransferase class I and II HY04AAS1_0488 429682 - 429867 + | protein of unknown function DUF343 HY04AAS1_0489 429845 - 431122 + | FAD linked oxidase domain protein HY04AAS1_0490 431135 - 432424 + | small GTP-binding protein HY04AAS1_0491 432428 - 433558 + | arginine biosynthesis bifunctional protein ArgJ HY04AAS1_0492 434049 - 433555 - | peptide deformylase HY04AAS1_0493 434543 - 434046 - | amino acid-binding ACT domain protein TERM 330 434599 - 434583 - H 89 -10.9 -3.65314 | opp_overlap 434583 TCGAACCCGCAACAA CCACGTT GGC AACGTGG TGCTCTACCATTGAG TERM 331 434583 - 434599 + H 82 -10.9 -2.64794 | opp_overlap 434583 TCGAACCCGCAACAA CCACGTT GGC AACGTGG TGCTCTACCATTGAG TERM 332 435956 - 435941 - g 72 -4 -4.96996 | opp_overlap 435941 435950 CCTAAAGAAAATAAA CTCTTA TGTG CAAGAG TCTCTTATGCTTGTG HY04AAS1_0494 434748 - 436142 + | fumarate hydratase, class II TERM 333 436455 - 436465 + G 73 -3.2 -5.21709 | CATAACACCTTCTTG CCTT GAA AGGG TTTTTTACTCTGAAG HY04AAS1_0495 436132 - 437466 + | aminotransferase class-III TERM 334 437740 - 437725 - g 72 -4 -4.93316 | TAAGAAGATTAAAAA GAAAGA TAAG CCTTTC AGAGATAAAATCCAT HY04AAS1_0496 437463 - 437861 + | protein of unknown function DUF55 TERM 335 438065 - 438081 + G 73 -7.3 -4.15833 | TTACAAGCTTTTGTG CCGAGTA TAA TACTTGG TTTTGCGGTGCTCAT HY04AAS1_0497 437858 - 438424 + | hypothetical protein HY04AAS1_0498 438762 - 438412 - | hypothetical protein HY04AAS1_0499 439999 - 438746 - | Glycine hydroxymethyltransferase TERM 336 438967 - 438980 + g 73 -2.3 -5.35815 | TAGGTGGCAATGGAT CGAAG GGCA CTGCG TTTTTGTTTACTGTA HY04AAS1_0500 441333 - 440011 - | nucleotide sugar dehydrogenase TERM 337 440226 - 440239 + g 78 -3.9 -5.30155 | ATACATTTGGGTTGT CTTTT AGAT AAAAG TTTTTTGCTTGCTCC HY04AAS1_0501 442098 - 441349 - | protein of unknown function DUF28 TERM 338 441635 - 441646 + g 71 -4.4 -4.77079 | opp_overlap 441635, overlap 441620 CCTGCTTCTAAAGCA GCTT CCAT AAGC TTTTCTTCGTCTGTA HY04AAS1_0502 442694 - 442110 - | transcriptional regulator, DeoR family HY04AAS1_0503 443331 - 442741 - | ExsB family protein TERM 339 443643 - 443621 - g 80 -2 -5.69379 | ATAGAAGCAAAAAAA CCCTTAGATT GTA ACTCTAAAAG CTATAAAACTGTGTT HY04AAS1_0504 443462 - 443896 + | hypothetical protein HY04AAS1_0505 443893 - 444966 + | riboflavin biosynthesis protein RibD HY04AAS1_0506 444947 - 445978 + | S-adenosylmethionine/tRNA-ribosyltransferase-isomerase TERM 340 446021 - 445999 - T 73 -7.6 -3.61103 | opp_overlap 446000, overlap 446000 TAATTTTATGGTAAA CTGCCGGGAA ACC CTCCCGGCTA TAAGTTTTGATTAGA TERM 341 446020 - 446000 - T 72 -8.9 -2.7634 | opp_overlap 446000, overlap 445999 AATTTTATGGTAAAC TGCCGGGAA ACC CTCCCGGCT ATAAGTTTTGATTAG HY04AAS1_0507 446658 - 446032 - | hypothetical protein TERM 342 446599 - 446587 - G 78 -6.3 -4.86613 | TAAAACCAAAAGAAA CTCAA TAA TTGAG AAACCCCTATTTGAC HY04AAS1_0508 447593 - 446724 - | thymidylate synthase complementing protein ThyX TERM 343 447438 - 447454 + g 76 -4.5 -5.16969 | opp_overlap 447443, overlap 447443 GTAAGAACAAAGTCT TAAAAGA AAC TCTTTTG TTTCTTTTTTCTGTG TERM 344 447443 - 447458 + g 79 -3.3 -5.48787 | opp_overlap 447443, overlap 447438 AACAAAGTCTTAAAA GAAAC TCTTTT GTTTC TTTTTTCTGTGTTAT TERM 345 447535 - 447521 - G 73 -6.4 -4.30719 | TCTTTGTATAACAAA CCCTTG CAC CAAGAG CACACAACCAAGCTA HY04AAS1_0509 447664 - 448401 + | 3-oxoacyl-(acyl-carrier-protein) reductase HY04AAS1_0510 448432 - 448665 + | acyl carrier protein HY04AAS1_0511 448662 - 449903 + | 3-oxoacyl-(acyl-carrier-protein) synthase 2 HY04AAS1_0512 449916 - 450614 + | Ribonuclease III HY04AAS1_0513 450595 - 451365 + | hypothetical protein HY04AAS1_0514 451419 - 451691 + | conserved hypothetical lipoprotein TERM 346 451784 - 451763 - g 80 -8.7 -3.86822 | opp_overlap 451762, overlap 451751 TAATGCTCTTATAAA GGCAGCC AAAGCTCA GGCTGCC AATTATCCATTTTGT TERM 347 452136 - 452122 - g 78 -3.6 -5.25803 | AATCCGTACAAAAAA CTATTC AAA AAATAG AAAAAATTGCAAAAG HY04AAS1_0515 451692 - 452798 + | GTP-binding protein YchF TERM 348 453093 - 453109 + G 74 -3.6 -5.24531 | opp_overlap 453093 CATCTTGGAATAGGA CCAACC ACTGA GGATGG TTTTTTCTACGACGT TERM 349 453870 - 453847 - g 72 -3.9 -5.07011 | overlap 453861 TATACAAATCAAAAA TAAGAAGCC ATAAAG AGCTTCCTA TCAAAATAGCAGAGC HY04AAS1_0516 452811 - 454724 + | threonyl-tRNA synthetase HY04AAS1_0517 454721 - 455386 + | dethiobiotin synthase TERM 350 456115 - 456125 + G 73 -5.4 -4.6759 | CCTTTCATATCGGTA TCTG GAT CAGA TTTTGTTGAGATGTT TERM 351 456304 - 456294 - g 70 -6.8 -4.08763 | AGAACAAACATTAAA CCAG CTT CTGG TAGAAATGGATGGTT HY04AAS1_0518 455434 - 457344 + | ATP-dependent metalloprotease FtsH HY04AAS1_0519 457413 - 458687 + | homoaconitate hydratase family protein HY04AAS1_0520 458699 - 458920 + | hypothetical protein HY04AAS1_0521 458914 - 459288 + | holo-acyl-carrier-protein synthase TERM 352 459730 - 459720 - g 70 -3.2 -5.01732 | AATCTTGGGAAAAAA GCCA ACG TAGC AATAAGAGTAAATCC HY04AAS1_0522 459282 - 460544 + | diaminopimelate decarboxylase HY04AAS1_0523 460572 - 461060 + | 4-vinyl reductase 4VR HY04AAS1_0524 461062 - 462327 + | adenosylhomocysteinase TERM 353 463176 - 463136 - g 71 -9.3 -2.53876 | overlap 463146 463156 GCGCATTGGAATTTA TGGATAAAAATTCTATACA AGC TGTACAAAAATTCTATCCA GCCGGTATTCCAGAA TERM 354 463267 - 463256 - g 95 -4.4 -5.98675 | TAGAAAAAGAAAAAA TGGA GGTA TCCA ACATACTAAAGTCTT HY04AAS1_0525 462382 - 463752 + | FAD linked oxidase domain protein HY04AAS1_0526 464272 - 463745 - | hypothetical protein TERM 355 463971 - 463959 - G 83 -6.9 -4.71828 | opp_overlap 463959, overlap 463954 AGCCCATGAACAAAA CCGGG GAG CCCAG GTCTTGGTCCAGTTT HY04AAS1_0527 465523 - 464315 - | type II secretion system protein HY04AAS1_0528 466341 - 465523 - | hypothetical protein HY04AAS1_0529 468299 - 466338 - | type II and III secretion system protein TERM 356 466777 - 466792 + g 70 -2.6 -5.13137 | gap 1, opp_overlap 466777 TTCATGGCTAACAAA GTG-CTT TTA AAGACAC TTTTTGCTTTGTTTA TERM 357 467198 - 467216 + g 78 -6.8 -4.56887 | TAGGTGTCACTATAG CTTTATCT GAA AGATAAGG TTTTATAAGTTTTTC HY04AAS1_0530 468600 - 468289 - | hypothetical protein HY04AAS1_0531 469345 - 468584 - | hypothetical protein TERM 358 469039 - 469059 + g 72 -7.7 -3.74158 | opp_overlap 469051, overlap 469037 TTAAAGAAAATACTT GATTGTTTA ATA TAGACAATC TATTTTGATAGGGTT HY04AAS1_0532 470138 - 469335 - | hypothetical protein HY04AAS1_0533 470383 - 470225 - | metallo-beta-lactamase family protein HY04AAS1_0534 470647 - 470411 - | hypothetical protein HY04AAS1_0535 471199 - 470657 - | hypothetical protein HY04AAS1_0536 471293 - 471201 - | hypothetical protein HY04AAS1_0537 472065 - 471277 - | pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit HY04AAS1_0538 472112 - 473230 + | 8-amino-7-oxononanoate synthase TERM 359 473402 - 473391 - g 71 -4.4 -4.87318 | TGTAAAAGTCAAAAA TCTC TAGA GAGA ATGGAAGAAAAACTA HY04AAS1_0539 473319 - 473606 + | hypothetical protein TERM 360 474880 - 474890 + G 73 -3.2 -5.13016 | CGTTTTTATTACCAC CAGC CTT GTTG TTTTTACTTTTGCTT HY04AAS1_0540 473772 - 475037 + | natural resistance-associated macrophage protein HY04AAS1_0541 476085 - 475150 - | binding-protein-dependent transport systems inner membrane component TERM 361 475657 - 475640 - G 74 -2.7 -5.33848 | ATCATAATTAAAAAA CCCAT AACAAAAG ATGGG ATAGACATTGATATA TERM 362 475789 - 475766 - G 91 -6 -5.47159 | opp_overlap 475766, overlap 475767 CTCCAAGATAAAAAA GCCGATGGTA TAGA TACCATCAGA GTATTTGGTATGCGT TERM 363 475788 - 475767 - G 83 -9.5 -3.87211 | opp_overlap 475766, overlap 475766 TCCAAGATAAAAAAG CCGATGGTA TAGA TACCATCAG AGTATTTGGTATGCG TERM 364 476046 - 476027 - G 76 -2.2 -5.47914 | overlap 476028 AAAAATGATAAAAAA CTTATAGT AAAA ACTACAAA AATACCCTGCAAAAT HY04AAS1_0542 477842 - 476085 - | DNA-directed DNA polymerase TERM 365 476324 - 476306 - G 73 -3.2 -5.24129 | overlap 476313 GCTCTTGAGAAAAAA TTAAAACT GAA AGCTTCAA CAATTCTGCTCCAGT HY04AAS1_0543 479209 - 477839 - | amino acid permease-associated region TERM 366 478761 - 478740 - G 86 -6.7 -5.19212 | AGTATTATCAAAAAA GCACTTATA TCTA TATAAGTAC CAGCGCTTGGATTGT TERM 367 479301 - 479291 - g 88 -5.4 -5.59357 | ATGATAGTAAAAAAA CCTA TTT TAGG TGGAGAGTTTATAAA HY04AAS1_0544 479276 - 480709 + | Aldehyde Dehydrogenase_ HY04AAS1_0545 481669 - 480701 - | Porphobilinogen synthase TERM 368 481464 - 481447 - G 75 -5.7 -4.8048 | CTGGTATACCAAAAA GTATAAA AGCT TTTATAC CAAAATCGAGACACT TERM 369 481603 - 481623 + g 71 -6.9 -3.87505 | opp_overlap 481603 AATCCGATAAATCTA CGCTTGT CTCTCTT ACAAGCG TTCTTATGGTCTCGT HY04AAS1_0546 481740 - 482471 + | hypothetical protein TERM 370 482672 - 482690 + G 70 -3.2 -4.92239 | opp_overlap 482672 GGTATTATAAAAAGA GATATTTT AGA AAAAAATC TTTTTGAGTTTTTAA TERM 371 484295 - 484282 - g 70 -5.3 -4.3821 | AAAATACAATATAAA CAAAG AGAG CTTTG AATTGGAAAAGATTA HY04AAS1_0547 482465 - 485350 + | hypothetical protein HY04AAS1_0548 485837 - 485352 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase HY04AAS1_0549 487111 - 485834 - | amidohydrolase HY04AAS1_0550 487569 - 487114 - | 6,7-dimethyl-8-ribityllumazine synthase HY04AAS1_0551 487994 - 487593 - | hypothetical protein TERM 372 487935 - 487921 - G 71 -5 -4.55697 | ACGCTTATAAACAAA GCCAAA AGT TTTAGC TGCCAATCCTTAATT HY04AAS1_0552 488931 - 487996 - | DNA replication protein DnaC HY04AAS1_0553 490448 - 488964 - | drug resistance transporter, EmrB/QacA subfamily TERM 373 489752 - 489741 - G 74 -4.4 -5.07011 | opp_overlap 489741 TATATAAAGCAAAAA GCTT ATCA AAGC TATATAGGAAAAAAC HY04AAS1_0554 492031 - 490445 - | Carbamoyl-phosphate synthase L chain ATP-binding TERM 374 492527 - 492508 - g 79 -5 -5.10601 | ACAAAAGCACAAAAA TCTGGTTT AGAC ATACCAGA CATAGATATGATATT HY04AAS1_0555 492076 - 493566 + | Anthranilate synthase TERM 375 493668 - 493648 - g 71 -7 -3.83144 | overlap 493646 TGAAGATAATAAAGA GCTTTTTT GTATA AAAAAAGC CATACATCAAGAGGC TERM 376 493803 - 493814 + G 74 -3 -5.2696 | ATATAGATGGTAAGC CTTT TGAA AAAG TTTTTTGGCTTTTAG HY04AAS1_0556 493556 - 494155 + | putative serine/threonine protein kinase HY04AAS1_0557 494651 - 494160 - | Sterol-binding domain protein TERM 377 494632 - 494642 + g 81 -5.4 -5.14563 | opp_overlap 494630 494641, overlap 494641 CCTACTAAACCCATA GCTA AAA TAGC TTTTTTCATAAAAAA HY04AAS1_0558 494805 - 495017 + | phosphoribosylformylglycinamidine synthase, purS HY04AAS1_0559 495014 - 495673 + | phosphoribosylformylglycinamidine synthase I TERM 378 495842 - 495856 + G 74 -2.9 -5.31275 | opp_overlap 495842 GAAGATGCTTTTAAA CATAA TAAGC TTATG TTTTTTGTACTACAA TERM 379 496043 - 496030 - g 70 -5.3 -4.38116 | TTTAGAAAAAGTAAA CAACA TTTA TGTTG CAGATGTTTTGCCGA TERM 380 498087 - 498077 - g 73 -3.2 -5.11033 | overlap 498067 498064 CAGAAGCCTAAAAAA GGCT CCA AACC CAAAAAAGCTAAGGA HY04AAS1_0560 495689 - 498112 + | ATP-dependent protease La HY04AAS1_0561 498109 - 498642 + | deoxycytidine triphosphate deaminase HY04AAS1_0562 499162 - 498620 - | Lytic transglycosylase catalytic HY04AAS1_0563 501711 - 499171 - | diguanylate cyclase/phosphodiesterase TERM 381 499667 - 499683 + g 74 -3.7 -5.09762 | overlap 499668 GGCAATTTATGTTTA ACTATAG TAT CTATAGC TTTTTCTATTAAAAT HY04AAS1_0564 503028 - 501808 - | histidyl-tRNA synthetase TERM 382 502702 - 502728 + g 79 -5.2 -5.24129 | opp_overlap 502701 ATATCTAAACATAGG CCCTTCGTAAAA AAG TTTTAGGAAAGG TTTTTTATACAAAAG HY04AAS1_0565 504376 - 503030 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 383 503315 - 503287 - G 83 -6.9 -4.83615 | CATTTTTTATAAAAA CCTTAAAAAAGAT GCC ATCTTTCTCAAAG ACCAAAGACTTATCA HY04AAS1_0566 505809 - 504373 - | Leucyl aminopeptidase TERM 384 505086 - 505102 + g 81 -3.7 -5.51353 | GTCCTTTACCCACGA TAGCAAG TTT CTTTCTA TTTTTCTTATTTTTC TERM 385 505517 - 505527 + g 90 -4 -5.79588 | ATTAACACAGCCTTA GATA CTT TATC TTTTTTTAGTTTTGC TERM 386 505933 - 505954 + r 74 -3.1 -5.38348 | gap 1, opp_overlap 505933, overlap 505934 TATATTATGCACTAA GT-TTAAGCT GAT GGCTTAAGAC TTTTTTCATGTTTTT HY04AAS1_0567 507133 - 505922 - | aminotransferase class I and II HY04AAS1_0568 507482 - 507126 - | transcriptional regulator, TraR/DksA family HY04AAS1_0569 508970 - 507519 - | methyl-accepting chemotaxis sensory transducer HY04AAS1_0570 509648 - 508995 - | multiple antibiotic resistance (MarC)-related protein TERM 387 509268 - 509292 + gr 91 -6.5 -5.42605 | overlap 509272 TCCTGCTAAGAGTGG TATCGCTATGG GTA CTATAGCTATA TTTTCTTTTTGTTCA TERM 388 509272 - 509288 + gr 70 -7.3 -3.69867 | overlap 509268 GCTAAGAGTGGTATC GCTATGG GTA CTATAGC TATATTTTCTTTTTG HY04AAS1_0571 510193 - 509621 - | hypothetical protein HY04AAS1_0572 513284 - 510183 - | acriflavin resistance protein HY04AAS1_0573 514450 - 513281 - | efflux transporter, RND family, MFP subunit TERM 389 513559 - 513569 + g 82 -6.8 -4.99638 | ACATATCTGGGATTG CACC TAT GGTG TTTTTGTCTAAATAT TERM 390 514252 - 514281 + g 81 -7.3 -4.56367 | overlap 514235 ATGCTATACTTGCCT CGTTTTTGGGT TCAAATCT ACCCAAAAATG TTTCTTTATCAGCTA HY04AAS1_0574 515730 - 514447 - | outer membrane efflux protein HY04AAS1_0575 516115 - 515714 - | protein tyrosine phosphatase HY04AAS1_0576 516438 - 516112 - | transcriptional regulator, ArsR family TERM 391 516198 - 516208 + g 81 -5.4 -5.24515 | TATCTTTTAAAAGCT CCAA AAC TTGG TTTTCTTTGTTTATT TERM 392 516418 - 516402 - G 89 -10.9 -4.00782 | opp_overlap 516401 TTATATCATCAGAAA GCGCATA AAA TATGCGC CTTAGCTCTTCTTTT HY04AAS1_0577 516713 - 516435 - | hypothetical protein TERM 393 516590 - 516600 + g 73 -6.8 -4.21827 | TACACTCACATCTTC CTGC TTT GCAG TTTTCCACTATTTGC HY04AAS1_0578 516905 - 517060 + | hypothetical protein HY04AAS1_0579 517063 - 517794 + | hypothetical protein HY04AAS1_0580 517921 - 519132 + | Cyclopropane-fatty-acyl-phospholipid synthase HY04AAS1_0581 519157 - 519528 + | hypothetical protein HY04AAS1_0582 520958 - 519525 - | pyruvate kinase TERM 394 520159 - 520169 + g 73 -3.2 -5.20216 | overlap 520156 ATCACAGGTTTTCCA GCTA AGT TGGC TTTTTTGATGATATG TERM 395 520909 - 520929 + g 74 -4.7 -4.88646 | ACCTCTTGTGAAGCT GGTCCTATG GTG CATACGATC TTTGTTTTACTTTTT HY04AAS1_0583 522369 - 520981 - | Chloride channel core TERM 396 522273 - 522261 - G 74 -2.6 -5.31091 | TATAATAAAAGAAAA GAGC ACCAA GCCC AGATACAACACCGTT HY04AAS1_0584 522661 - 522362 - | protein of unknown function DUF190 HY04AAS1_0585 522969 - 522658 - | protein of unknown function DUF190 HY04AAS1_0586 523334 - 522966 - | CrcB protein HY04AAS1_0587 523551 - 524900 + | UDP-N-acetylmuramate/alanine ligase TERM 397 525169 - 525179 + G 78 -4 -5.31275 | opp_overlap 525169 GATGAGCTTAAAAAC TCTT TAA AAGA TTTTTTATCATCAGA HY04AAS1_0588 524887 - 525654 + | glycosyl transferase family 2 HY04AAS1_0589 526700 - 525657 - | heat shock protein DnaJ domain protein HY04AAS1_0590 527049 - 526687 - | hypothetical protein TERM 398 526853 - 526840 - G 72 -3.9 -5.04385 | opp_overlap 526840 TATATTTTGAAAAAA CATAT CCTG ATATG TGTTTGCTTGAAAAT TERM 399 526876 - 526896 + g 83 -9.1 -4.30909 | TTGAAAATCATTTTC GCTTGCAAA AGA TTTGTAAGC TTCTTTTAATATCTC HY04AAS1_0591 528090 - 527062 - | flagellar P-ring protein TERM 400 528139 - 528120 - R 90 -12.2 -3.26188 | AATATTATAAGTCAA TAGGAGGC AAAA GCCTCCTA CATAAAAATTAGAAA HY04AAS1_0592 529263 - 528148 - | Radical SAM domain protein HY04AAS1_0593 530889 - 529354 - | L-aspartate oxidase HY04AAS1_0594 531850 - 530876 - | protein of unknown function UPF0052 and CofD HY04AAS1_0595 532839 - 531853 - | translation initiation factor, aIF-2BI family TERM 401 531902 - 531887 - G 72 -7.6 -3.679 | opp_overlap 531886 AAACTCTCAACATAA GGATAG TATG CTATCC CGTTCTCTGTTATTA HY04AAS1_0596 533714 - 532833 - | homoserine kinase HY04AAS1_0597 533886 - 534281 + | hypothetical protein TERM 402 534498 - 534481 - g 81 -5.6 -5.22006 | opp_overlap 534481 534480 534483 GGAGTAGAAGAAAAA GATGGA TATTGG TCCATC GTTGTAAAAAGAACC HY04AAS1_0598 534292 - 534519 + | SirA family protein TERM 403 535127 - 535097 - g 76 -7.8 -4.17701 | overlap 535099 GGGATAAAGTAGAAA TATATTATACCTAT CCC ATAGGTAGAATACA CGCGCTAGAGCCAGT TERM 404 535125 - 535099 - g 74 -8.2 -3.67823 | overlap 535097 GATAAAGTAGAAATA TATTATACCTAT CCC ATAGGTAGAATA CACGCGCTAGAGCCA HY04AAS1_0599 534541 - 535686 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 405 536443 - 536430 - g 76 -2.4 -5.51353 | opp_overlap 536430, overlap 536424 GAAAAAGAACAAAAA CCAA GTTTAT TTGG TTTATTGAAAGAGCT HY04AAS1_0600 535698 - 536558 + | hypothetical protein TERM 406 536587 - 536566 - T 87 -10.1 -3.85165 | overlap 536567 CATGCTAAATTGAAA GCCGTCCCA TACA TGGGACGGT GAAAATGATTTTAAG TERM 407 536586 - 536567 - T 100 -13.6 -2.90617 | overlap 536566 ATGCTAAATTGAAAG CCGTCCCA TACA TGGGACGG TGAAAATGATTTTAA HY04AAS1_0601 537212 - 536610 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 408 537108 - 537128 + g 73 -7 -4.07568 | overlap 537106 CCATTTTTTGTTTGC TTTAGCTT CTGCT AAGCTAAA TTTTCCAAAGGACCC HY04AAS1_0602 537422 - 537279 - | hypothetical protein HY04AAS1_0603 538492 - 537419 - | twitching motility protein TERM 409 538448 - 538419 - G 76 -3.5 -5.40072 | TGTGCTCTAAAAAAA GGTTTTGCACCTA CCTT TAGGTGAATATCC GAAACTGAAGCTTCT HY04AAS1_0604 539391 - 538513 - | integrase family protein HY04AAS1_0605 540386 - 539388 - | malate dehydrogenase, NAD-dependent TERM 410 540305 - 540290 - G 70 -3.2 -4.98531 | TTGGTAAATCAAAAA GCCTTA TGTT TACGGC ACCTTTGAGTACCAA HY04AAS1_0606 542356 - 540389 - | aconitate hydratase HY04AAS1_0607 543520 - 542375 - | protein of unknown function DUF100 TERM 411 543921 - 543907 - g 79 -5 -5.18726 | opp_overlap 543907 CGCTTATAATAAAAA CAACTA TCA TAGCTG TGTTAAGAGAGCTTT HY04AAS1_0608 543603 - 544130 + | hypothetical protein HY04AAS1_0609 544482 - 544135 - | hypothetical protein HY04AAS1_0610 545702 - 544479 - | major facilitator superfamily MFS_1 TERM 412 545769 - 545734 - H 75 -5 -5.0809 | opp_overlap 545746 AACAAATTATAAAAA TTTAATAATAAATGAT ACCA ATCATCTACTTTTAAA AGTTGTGCAAACTTT HY04AAS1_0611 545913 - 546791 + | UTP-glucose-1-phosphate uridylyltransferase TERM 413 546933 - 546906 - g 79 -10.8 -2.79831 | gap 1, opp_overlap 546902 TGAAGGTGGAGTATA TTTTGCAGTTTGG GCT CCAAAC-GCAAAA GAAGTCTATGTAGAG TERM 414 548393 - 548404 + G 77 -3 -5.54079 | TTGATTTTCAAGACG TAGA GCAA TCTA TTTTTTCGTTTTTAA HY04AAS1_0612 546778 - 548673 + | 1,4-alpha-glucan branching enzyme HY04AAS1_0613 548716 - 548847 + | hypothetical protein HY04AAS1_0614 550235 - 548844 - | signal recognition particle-docking protein FtsY HY04AAS1_0615 550690 - 550271 - | ferric uptake regulator, Fur family HY04AAS1_0616 550856 - 551218 + | hypothetical protein HY04AAS1_0617 551215 - 551325 + | hypothetical protein HY04AAS1_0618 551347 - 552366 + | hypothetical protein TERM 415 552399 - 552369 - f 79 -6.9 -4.69656 | opp_overlap 552376, overlap 552376 AAGCATCCAATAAAA TTTAAGAGCCTGC TTTAT GCAGGCTTTTTAA ACATTAACTCACACA TERM 416 552392 - 552376 - f 78 -9.4 -3.28907 | opp_overlap 552376, overlap 552369 CAATAAAATTTAAGA GCCTGC TTTAT GCAGGC TTTTTAAACATTAAC TERM 417 552376 - 552392 + F 93 -9.4 -4.62471 | opp_overlap 552376 552369 CAATAAAATTTAAGA GCCTGC TTTAT GCAGGC TTTTTAAACATTAAC HY04AAS1_0619 552746 - 554767 + | TonB-dependent receptor TERM 418 554791 - 554803 + F 80 -6.2 -4.85782 | TTGTCCATTCTATTG GGGC CTTGT GCCC TTTATTTTTAAAAGC HY04AAS1_0620 554868 - 555179 + | transcriptional regulator, ArsR family HY04AAS1_0621 555160 - 555486 + | thioredoxin TERM 419 555529 - 555552 + G 75 -7.3 -4.35483 | overlap 555542 TAATAGTTGGTGGAG GTCCGGCCG GTCTTA CAGCCGGGC TTTATTGTGCTAGAG HY04AAS1_0622 555483 - 556421 + | thioredoxin reductase HY04AAS1_0623 556428 - 557486 + | type IV pilus assembly PilZ HY04AAS1_0624 557483 - 558304 + | oxidoreductase domain protein HY04AAS1_0625 558285 - 559439 + | RNA binding S1 domain protein HY04AAS1_0626 559485 - 560723 + | threonine synthase HY04AAS1_0627 560725 - 560823 + | hypothetical protein TERM 420 561312 - 561328 + G 91 -5.2 -5.9218 | AAAATCTCAGCTATT TACTGT TTTTT ACAGTA TTTTTTTATTCTGTA TERM 421 561544 - 561561 + G 78 -6.3 -4.88163 | gap 1, overlap 561540 GTTAATGGCATCCTT GCTCTTGG GAG CCA-GAGC TTTGTTTTATATTCA HY04AAS1_0628 560828 - 561604 + | ribonuclease BN HY04AAS1_0629 561646 - 561945 + | anti-sigma-28 factor, FlgM HY04AAS1_0630 563458 - 562031 - | Chloride channel core HY04AAS1_0631 563496 - 565355 + | oxaloacetate decarboxylase alpha subunit TERM 422 565937 - 565957 + G 72 -7.7 -3.73414 | opp_overlap 565928 565937, overlap 565928 ATGATATATTTAAAA TATTGGATA AAT TATCCGATA TTTAGGTGTAGTGTA HY04AAS1_0632 565348 - 565962 + | ATP phosphoribosyltransferase HY04AAS1_0633 565972 - 566706 + | MotA/TolQ/ExbB proton channel TERM 423 567494 - 567480 - g 76 -4.2 -5.13648 | CAAATAGAAAGAAAA TGGGGT ATC ATCCCA AATGCTCAAAATCCC HY04AAS1_0634 566712 - 567527 + | OmpA/MotB domain protein TERM 424 568184 - 568174 - g 70 -6.8 -4.12397 | GCATAGAAGCACAAA TGCC TCA GGCA ACACAGGAGATCTGC TERM 425 568850 - 568834 - g 81 -9.5 -3.66874 | TGAAGCTTATGTAAA CTCTTTG ATG CAAAGAG AAGGAAATGTTAAAT HY04AAS1_0635 567557 - 569257 + | succinate dehydrogenase or fumarate reductase, flavoprotein subunit TERM 426 570026 - 570016 - g 70 -2.6 -5.19916 | AAAAGACTGAAAAAA TTTT ATG AAAA TGAAGGTTTTTTTGA TERM 427 570245 - 570226 - g 78 -3.7 -5.35459 | overlap 570214 AGATATTATAAAAAA TCTATAA TAAAGC TTATAGA AAAAAGAATATTTGA HY04AAS1_0636 569257 - 571584 + | outer membrane protein assembly complex, YaeT protein TERM 428 571816 - 571806 - g 73 -2.4 -5.28315 | opp_overlap 571806 AGAAAAGTTAAAAAA GGGG AAG CCGC TTGTAGTAAAAGCAG HY04AAS1_0637 571720 - 572898 + | tyrosyl-tRNA synthetase HY04AAS1_0638 572895 - 574205 + | nucleotide sugar dehydrogenase HY04AAS1_0639 574205 - 574624 + | NusB antitermination factor TERM 429 574667 - 574655 - g 70 -2.7 -5.21506 | overlap 574656 AGAAGAAGAGAAAAA CTTAG AAT CTAAA AAAATATTCTCTTCT TERM 430 575233 - 575222 - g 74 -3 -5.26918 | AGATGCTATAAAAAA TGAA GGAT TTCA AGTGACTTACGTCCC HY04AAS1_0640 574617 - 575303 + | Uroporphyrinogen III synthase HEM4 HY04AAS1_0641 575323 - 576198 + | UDP-3-0-acyl N-acetylglucosamine deacetylase TERM 431 576898 - 576886 - g 79 -3.3 -5.4505 | overlap 576894 576896 TGGTGCAACAAAAAA GGATG GAA CAGCC TACACGCTGCTTACA HY04AAS1_0642 576262 - 577089 + | thiol:disulfide interchange protein HY04AAS1_0643 577118 - 578257 + | histone deacetylase superfamily HY04AAS1_0644 578310 - 579041 + | transcriptional regulator, Crp/Fnr family HY04AAS1_0645 579066 - 580589 + | GMP synthase, large subunit TERM 432 580702 - 580691 - g 78 -5.8 -4.8048 | CTTTTATAGCAAAAA GAGC TGGC GCTC ACCAAATCACAATGC HY04AAS1_0646 580594 - 581316 + | pyridoxal phosphate biosynthetic protein PdxJ HY04AAS1_0647 581313 - 581753 + | DNA ligase D, 3'-phosphoesterase domain protein HY04AAS1_0648 581794 - 582792 + | flagellar motor switch protein FliG HY04AAS1_0649 582785 - 583534 + | hypothetical protein HY04AAS1_0650 583500 - 584777 + | ATPase, FliI/YscN family HY04AAS1_0651 584788 - 585510 + | flagellar hook assembly protein TERM 433 585845 - 585830 - g 71 -9 -3.23572 | opp_overlap 585829 ATTTATTTTACAAGA TCCAGC CAAT GCTGGA AATGTTTTTTATACA HY04AAS1_0652 585522 - 587273 + | protein of unknown function DUF1078 domain protein HY04AAS1_0653 587285 - 587770 + | flagellar basal body-associated protein FliL HY04AAS1_0654 587775 - 588047 + | hypothetical protein HY04AAS1_0655 588025 - 588783 + | flagellar biosynthetic protein FliP HY04AAS1_0656 588780 - 589049 + | flagellar biosynthetic protein FliQ HY04AAS1_0657 589051 - 589827 + | type III secretion system inner membrane R protein HY04AAS1_0658 589811 - 590872 + | flagellar biosynthetic protein FlhB HY04AAS1_0659 590869 - 591507 + | Radical SAM domain protein HY04AAS1_0660 591507 - 591968 + | Ribonuclease H HY04AAS1_0661 592287 - 591940 - | hypothetical protein HY04AAS1_0662 592440 - 592294 - | hypothetical protein HY04AAS1_0663 592582 - 592442 - | hypothetical protein HY04AAS1_0664 592736 - 592575 - | hypothetical protein HY04AAS1_0665 594260 - 592902 - | Tetratricopeptide TPR_2 repeat protein HY04AAS1_0666 595110 - 594280 - | polyferredoxin-like protein HY04AAS1_0667 595603 - 595205 - | hypothetical protein HY04AAS1_0668 596566 - 595652 - | glycosyl transferase family 9 TERM 434 595978 - 595988 + g 70 -3.2 -5.00895 | TAACGCCTTTGGCAT CGGT ATT ATCG TTTTTATCTCCTAAA TERM 435 596148 - 596165 + g 73 -2 -5.38047 | overlap 596149 CTCTCATCTATTACT TCCAAA TAAGGT TTTGGG TTTTTTATATCGATA TERM 436 596434 - 596424 - G 70 -5.4 -4.49781 | overlap 596431 AAAACATTTACAAAA GAAG AAT CTTC AAATATAGAAGCAAA HY04AAS1_0669 596780 - 596559 - | molybdopterin converting factor, small subunit HY04AAS1_0670 598171 - 596777 - | glutamyl-tRNA synthetase HY04AAS1_0671 598220 - 598999 + | hypothetical protein TERM 437 599770 - 599760 - g 73 -5.4 -4.64766 | opp_overlap 599758 599760 TGGATATGCTAAAAA CCTT GAA AAGG TATTTGAAATAGCCC TERM 438 600272 - 600252 - g 70 -2.6 -5.1361 | overlap 600253 AGAAAGGGTAAAAAA GCTTTTAG AAGAA CTAAAAGA AAAACCAGAGGCAAT HY04AAS1_0672 599080 - 602028 + | ATPase AAA-2 domain protein TERM 439 602045 - 602065 + F 80 -5.3 -5.23316 | opp_overlap 602045 602046, overlap 602046 AAATATTTCTGATAA CGGCGGG AGAATAA CCCGCCA TTTTTTGCTATAATA TERM 440 602046 - 602064 + F 77 -8.8 -3.72905 | opp_overlap 602045 602046, overlap 602045 AATATTTCTGATAAC GGCGGG AGAATAA CCCGCC ATTTTTTGCTATAAT TERM 441 602715 - 602703 - g 75 -5.5 -4.74706 | opp_overlap 602703, overlap 602696 GGTAATATCGAAAAA CTCCG GCA CAGAG TATTACCTTGGTAGC HY04AAS1_0673 602086 - 603276 + | peptidase U32 HY04AAS1_0674 603290 - 604615 + | gamma-glutamyl phosphate reductase HY04AAS1_0675 605684 - 604617 - | Three-deoxy-D-manno-octulosonic-acid transferase domain protein HY04AAS1_0676 606782 - 605685 - | Myo-inositol-1-phosphate synthase TERM 442 606564 - 606554 - G 73 -5.4 -4.57073 | opp_overlap 606554 CATTTGGCTCAAAAA TTGC AGT GCAA TTTGGTTTTTCGTAA HY04AAS1_0677 607678 - 606785 - | dephospho-CoA kinase HY04AAS1_0678 609459 - 607675 - | GTP-binding protein TypA TERM 443 608993 - 608970 - G 70 -5.4 -4.37886 | gap 1, overlap 608971 608972 CTATGGCGTATAAAA CTGGAAAATCA AGC TGATCTTCC-G TAGCATCAAGGTCTA HY04AAS1_0679 610789 - 609470 - | transcription termination factor Rho HY04AAS1_0680 612188 - 610872 - | tRNA modification GTPase TrmE TERM 444 612325 - 612293 - R 76 -6.1 -4.61633 | opp_overlap 612323, overlap 612295 612316 612320 612321 AGAGAGTTTCAAAAA CTGGGGTGCCTGGAT TCG AACCAGGAACCCTCG GATCCAAAATCCGAT HY04AAS1_0681 612753 - 612409 - | iron-sulfur cluster assembly accessory protein HY04AAS1_0682 613691 - 612864 - | biotin/lipoate A/B protein ligase HY04AAS1_0683 614122 - 613664 - | GCN5-related N-acetyltransferase HY04AAS1_0684 614383 - 614129 - | transcriptional regulator, AsnC family HY04AAS1_0685 615608 - 614412 - | glutamyl-tRNA reductase HY04AAS1_0686 617295 - 615598 - | prolyl-tRNA synthetase TERM 445 616052 - 616039 - G 74 -4.5 -5.03314 | overlap 616040 TTTATCTGTAAAAAA CGCCT TCAT AGGCA AAGAGTATCTGGTAC TERM 446 617231 - 617259 + g 73 -5.9 -4.53163 | overlap 617237 617238 GTAAGAAATCTATGA GAAGCTGCCTCTG TTT CAGAGGGTTCTTC TTTTGTGGTGTATAA TERM 447 617237 - 617253 + g 73 -6.5 -4.27842 | overlap 617231 617238 AATCTATGAGAAGCT GCCTCTG TTT CAGAGGG TTCTTCTTTTGTGGT TERM 448 617238 - 617252 + g 77 -10 -3.15078 | overlap 617237 617231 ATCTATGAGAAGCTG CCTCTG TTT CAGAGG GTTCTTCTTTTGTGG HY04AAS1_0687 620435 - 617457 - | hypothetical protein TERM 449 619339 - 619364 + g 70 -3.4 -5.00884 | opp_overlap 619342 619362, overlap 619342 ATACCCCAATCCGAT AAACCTTTTT CTACAA AAAAAGGTTC TTTTTTAGAAAAGAT TERM 450 619342 - 619361 + g 71 -5.1 -4.61482 | opp_overlap 619342, overlap 619339 CCCCAATCCGATAAA CCTTTTT CTACAA AAAAAGG TTCTTTTTTAGAAAA TERM 451 620225 - 620244 + g 78 -5.8 -4.84359 | gap 1, opp_overlap 620225 620228, overlap 620228 CATCCAAATCAGCAA GCACCAAAA CCT TTTTGG-GC TTTTTATCCAAGTAA TERM 452 620281 - 620306 + g 70 -2.7 -5.19328 | gap 1, opp_overlap 620283, overlap 620283 TTAAGATGCTTAAGA TAGCTTTT-TCT TAT AGACAAAAGCTC TTTTTCTTCTACAAT HY04AAS1_0688 620722 - 620540 - | hypothetical protein HY04AAS1_0689 622466 - 620712 - | hypothetical protein TERM 453 621683 - 621716 + g 76 -6.1 -4.63172 | gap 1, overlap 621689 CAAATGTTTGAACAT GGTTACCGTTCAAGTA CAT TGCTTGAGC-GTATCC TTTTATAATTTCATA TERM 454 621689 - 621711 + g 75 -9.2 -3.16261 | overlap 621683 TTTGAACATGGTTAC CGTTCAAGTA CAT TGCTTGAGCG TATCCTTTTATAATT TERM 455 622539 - 622529 - R 79 -2.6 -5.89827 | AATCATGAAAAAAAA TTAT ATC ATAA AGTTTGTGTATAAAT HY04AAS1_0690 623715 - 622750 - | Integrase catalytic region TERM 456 623569 - 623581 + g 71 -9.1 -3.22562 | opp_overlap 623569 623568, overlap 623567 CTTTAACTCTGAAAT GCGCT GAT AGCGC TCTATTGCTATTTTC TERM 457 623769 - 623779 + r 74 -6.8 -4.33153 | TGGTTCTTGATAGTG TGCC AGG GGCA TTTCTTACTATTGCG HY04AAS1_0691 625120 - 624089 - | metalloendopeptidase, glycoprotease family HY04AAS1_0692 626380 - 625124 - | carboxyl-terminal protease TERM 458 625320 - 625330 + g 93 -6.8 -5.72622 | TTTATCAGTATATCT GGCA TAA TGCC TTTTTTGTTTATACA TERM 459 626281 - 626293 + g 93 -6.3 -5.92399 | opp_overlap 626277 626280 GCCTTATATAATCAG CATCA GAC TGATG TTTTTTGTTTTGTTC HY04AAS1_0693 626811 - 626395 - | hypothetical protein TERM 460 628061 - 628081 + G 74 -2.5 -5.30616 | overlap 628062 628064 628065 TATTGGTTACAGCTT TTAGGTACC GCT GGTACATGG TTTTTGTTTGACTAC HY04AAS1_0694 627302 - 628681 + | General substrate transporter TERM 461 628709 - 628692 - f 85 -6.9 -5.10064 | opp_overlap 628694, overlap 628694 CCTAACATATAAAAA TAGCCCC GTTT GGGGCTT TTAAAATTAACAAAA TERM 462 628694 - 628707 + F 90 -9.5 -4.19238 | opp_overlap 628692 628694 TAACATATAAAAATA GCCCC GTTT GGGGC TTTTAAAATTAACAA TERM 463 628707 - 628694 - f 90 -9.5 -4.16832 | opp_overlap 628694, overlap 628692 TAACATATAAAAATA GCCCC GTTT GGGGC TTTTAAAATTAACAA HY04AAS1_0695 628754 - 629542 + | phospholipid/glycerol acyltransferase TERM 464 629689 - 629669 - gf 76 -4.8 -4.92756 | ACCACGAAAAAGAAA CGCTTTTA GATAT TAAAAACG AGGTATTGGAGATTA TERM 465 630038 - 630052 + GF 90 -3.6 -5.83211 | GTAGCAGGGGCTATA TAGAAG ATG TTTCTA TTTTTTCTTTTGATA HY04AAS1_0696 629512 - 630246 + | deacetylase-like protein TERM 466 630260 - 630243 - f 79 -3.5 -5.52096 | AAACTTAATAAAAAA TTAACAC ATAT GTATTAA ATTAGATAATAGCTA HY04AAS1_0697 630288 - 632606 + | glycosyl transferase group 1 TERM 467 633412 - 633402 - g 93 -6.8 -5.9362 | opp_overlap 633401 633402 TAAAAGACAAAAAAA CCCT GGC AGGG CTTTACAAGGCATCT TERM 468 633502 - 633477 - g 78 -9.8 -3.32844 | overlap 633479 633482 TTGGCTATTCTATAA TAGAAGCCCA GGCCTG TGGGCTTCCA GTGGTGGCTTACAAG TERM 469 633500 - 633479 - g 77 -10.2 -3.23393 | overlap 633477 633482 GGCTATTCTATAATA GAAGCCCA GGCCTG TGGGCTTC CAGTGGTGGCTTACA TERM 470 633562 - 633577 + G 74 -7.6 -3.87373 | TAAAAATTATCTTGC CTCTTC AAAA GAAGAG TTTATAAAAAATCTA HY04AAS1_0698 632603 - 633739 + | glycosyl transferase group 1 HY04AAS1_0699 635608 - 633707 - | diguanylate cyclase/phosphodiesterase HY04AAS1_0700 636825 - 635605 - | hypothetical protein HY04AAS1_0701 637102 - 636815 - | hypothetical protein TERM 471 636876 - 636860 - G 81 -7.3 -4.56597 | GTTTTTTTCTAAAAA CTCCAAA GCC TCTGGAG CCAATAGATGACCAA HY04AAS1_0702 637314 - 639503 + | TonB-dependent receptor HY04AAS1_0703 639604 - 639933 + | DNA polymerase beta domain protein region TERM 472 639950 - 639938 - g 76 -6.3 -4.56775 | opp_overlap 639946 639947, overlap 639940 ATGTTTTCTGAAAAA GATAG AGG CTATC TAATAGATATTTTGC HY04AAS1_0704 639923 - 640210 + | protein of unknown function DUF86 TERM 473 640195 - 640215 + F 82 -7.7 -4.61566 | opp_overlap 640195 GCAAGTTTTAAACGA TGAGTTTAA ACA TTAAGCTCA TTTTATACTTTAAAC TERM 474 640584 - 640563 - g 80 -2.2 -5.63504 | overlap 640565 640575 AAGGTTATAAAAAAA GACCAACT TAAAGT AGCTGGAC CTACTGGTAGCGCTT HY04AAS1_0705 640329 - 642728 + | TonB-dependent receptor HY04AAS1_0706 642826 - 643263 + | MotA/TolQ/ExbB proton channel HY04AAS1_0707 643265 - 643690 + | Biopolymer transport protein ExbD/TolR TERM 475 644047 - 644035 - g 100 -7.7 -5.99154 | TATCAAATAAAAAAA CCTGT CAA ACAGG ACGTTGCCACACAAT HY04AAS1_0708 643687 - 644457 + | TonB family protein TERM 476 645221 - 645194 - g 71 -4.9 -4.67755 | gap 1 ATACGTAGGTAAAAA GCTCGGCAAATC TAGTG AATCTGCCG-GC GTTCATCCTACAAAC TERM 477 645324 - 645304 - g 70 -9.1 -3.06361 | opp_overlap 645304 645303 TAGCAATCATAGATA CCAAAAACC TCA AGTTTTTGG GCTTTTTAAAAGATA TERM 478 645857 - 645843 - g 74 -2.8 -5.24989 | opp_overlap 645843 TTATACACTAAAAAA GAGCTT CCA AATCTC TTTAATTTTGCAGAT TERM 479 647070 - 647051 - g 76 -5.1 -5.00196 | TGCCAAAGAACAAAA TAAAAGC GTTTGG GCTTTTA TAAGTAACTGATATA HY04AAS1_0709 644460 - 647081 + | phosphoesterase TERM 480 647228 - 647208 - g 85 -2.5 -5.79588 | CTAAAAGTAAAAAAA GTCTATCAC GGT GTGGTATAC GACCTTTTGAGAAAA HY04AAS1_0710 647148 - 647513 + | hypothetical protein HY04AAS1_0711 647510 - 647893 + | hypothetical protein HY04AAS1_0712 647903 - 648202 + | hypothetical protein HY04AAS1_0713 648215 - 648412 + | hypothetical protein HY04AAS1_0714 648409 - 650505 + | heavy metal translocating P-type ATPase HY04AAS1_0715 650498 - 651358 + | cation diffusion facilitator family transporter TERM 481 651687 - 651699 + G 72 -7.7 -3.65693 | TAGCAACAAGTTTTA TTCGG AAA CCGAA TTTGACATATCTAGT HY04AAS1_0716 651379 - 652179 + | hypothetical protein TERM 482 652207 - 652195 - f 79 -2.7 -5.77571 | ATTAAAAAACAAAAA TAGCT TTA AACTA TGTCTTTTGGAGGTT TERM 483 652955 - 652967 + G 70 -3.3 -5.00616 | opp_overlap 652955 TAAAACTTTTAGGAA CCAAC GGT GGTGG TTTTTTCAACGCAAA HY04AAS1_0717 652228 - 653958 + | potassium-transporting ATPase, A subunit TERM 484 655371 - 655357 - g 74 -5 -4.83615 | GAGCTGGTATAAAAA CTGTCA TGA TAACAG GAGATAACCCTCTTA HY04AAS1_0718 653955 - 656009 + | K+-transporting ATPase, B subunit HY04AAS1_0719 656006 - 656602 + | Potassium-transporting ATPase HY04AAS1_0720 656566 - 658497 + | Osmosensitive K channel His kinase sensor HY04AAS1_0721 659240 - 658500 - | hypothetical protein TERM 485 658716 - 658685 - G 71 -7.4 -3.99592 | gap 1 ATGTACTATTAGAAA TATAAGACCATGTGG TAG CC-CAGGGTCCTATA AAATGAAGCAAAGCA TERM 486 659021 - 659008 - G 70 -8.1 -3.3393 | opp_overlap 659015, overlap 659007 TCTATGATAGAAAAG GCGAG TGGC CTCGC AAGAGGCTTATTAAT TERM 487 659015 - 659028 + g 74 -8.1 -3.78034 | opp_overlap 659008 659007 TAGAAAAGGCGAGTG GCCTC GCAA GAGGC TTATTAATATGCATG TERM 488 659108 - 659121 + g 74 -8.1 -3.65046 | opp_overlap 659101 659100 TTGAAAAGGCGAGTG GCCTC GCAA GAGGC TTATTGAGATGCACA HY04AAS1_0722 659295 - 659978 + | hypothetical protein TERM 489 660068 - 660054 - g 83 -7.2 -4.85129 | opp_overlap 660054 660056 AGTATACACCAAAAA TATCCT TTA AGGATA TAGTTGAGTCTCAAG HY04AAS1_0723 659966 - 660313 + | hypothetical protein HY04AAS1_0724 660301 - 660927 + | hypothetical protein TERM 490 661971 - 661993 + G 85 -12 -3.06302 | ATTCCTCCAACTGTA GCCGGAGTAG TGT CTACTCCAGC TTACATACCAATAGT TERM 491 662271 - 662261 - g 73 -3.2 -5.08601 | TGACCTTAAGAAAAA CAAC GAA GCTG GTATACCGTTTTTAA HY04AAS1_0725 660924 - 662390 + | Type II secretory pathway component PulD-like TERM 492 662656 - 662640 - g 80 -2.3 -5.70829 | AAGAGTACAAAAAAA CTCAAAT AAG ACTTAAG ATATTTTCTTCGAGA HY04AAS1_0726 662387 - 663106 + | hypothetical protein HY04AAS1_0727 663113 - 664213 + | hypothetical protein TERM 493 664665 - 664676 + G 74 -3 -5.29782 | CCTTTTTATCTTCCT TTTC TTAT GAAA TTTTTTATACCTATA HY04AAS1_0728 664215 - 665195 + | hypothetical protein HY04AAS1_0729 665249 - 666082 + | hypothetical protein TERM 494 666620 - 666630 + G 74 -4 -5.10208 | CCTAGTTTTACAGCT TCTA GCA TAGA TTTTTGTTCCAATTC HY04AAS1_0730 666098 - 667360 + | hypothetical protein HY04AAS1_0731 667547 - 668158 + | hypothetical protein TERM 495 668245 - 668232 - f 75 -8.1 -3.69684 | AAATCTATTCAATAA GCCTC TTGA GAGGC CACTAGACCAGTTAA TERM 496 668293 - 668280 - f 79 -8.1 -3.9693 | TATGCATTCAAATAA GCCTC TTGA GAGGC CACTATGTTATACTA HY04AAS1_0732 668315 - 669379 + | type II secretion system protein E HY04AAS1_0733 669384 - 669629 + | hypothetical protein HY04AAS1_0734 670081 - 669626 - | SNARE associated Golgi protein TERM 497 669904 - 669894 - G 71 -4.6 -4.73633 | overlap 669889 CAATAAGACACAAAA GCCC CTA AGGC ATTTGATAGAACACC HY04AAS1_0735 670248 - 670685 + | heat shock protein Hsp20 TERM 498 670719 - 670706 - f 76 -9.5 -2.99268 | opp_overlap 670706, overlap 670705 AGATATTCAAACAAG GGGCC TTCC GGCCC TTTTTTAATTTTTAT TERM 499 670706 - 670719 + F 100 -9.5 -5.56112 | opp_overlap 670706 670705 AGATATTCAAACAAG GGGCC TTCC GGCCC TTTTTTAATTTTTAT TERM 500 671500 - 671486 - g 70 -2.8 -5.1101 | overlap 671491 CCACCATCTAAAAAA TATAGG CTC CCAATA GAGCAATTGGTAGAG HY04AAS1_0736 670889 - 671524 + | nitroreductase HY04AAS1_0737 671521 - 672000 + | hypothetical protein HY04AAS1_0738 673462 - 671954 - | carbohydrate kinase, YjeF related protein HY04AAS1_0739 674646 - 673459 - | Phosphoglycerate kinase HY04AAS1_0740 674728 - 675651 + | malonyl CoA-acyl carrier protein transacylase HY04AAS1_0741 675648 - 676322 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein HY04AAS1_0742 676337 - 676669 + | hypothetical protein HY04AAS1_0743 676669 - 677175 + | histidine triad (HIT) protein HY04AAS1_0744 677218 - 677421 + | ribosomal protein S21 TERM 501 677418 - 677406 - f 84 -3.3 -5.86965 | AGCCATGAAAAAAAA GAGGG TGG CGCTC TGATGGACTTCATAG TERM 502 677463 - 677481 + G 75 -8.9 -3.61398 | ACTTTTGATAAGGTT TCTCTGC AGGAA GCAGAGA TTGTTGAAAGAAAAG HY04AAS1_0745 677421 - 678620 + | Methionine adenosyltransferase HY04AAS1_0746 678640 - 678987 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 HY04AAS1_0747 679013 - 679546 + | NADH-quinone oxidoreductase, B subunit HY04AAS1_0748 679548 - 681308 + | NADH-ubiquinone oxidoreductase chain 49kDa TERM 503 681437 - 681456 + G 84 -7.8 -4.55826 | opp_overlap 681437, overlap 681453 TTGCAAGCAAGAAGA GGTCCTAC CGTT GTGGGGCC TTTTGGTCTTTTGCA TERM 504 682152 - 682168 + G 77 -8.1 -3.90086 | overlap 682160 TCTCTGGCTTTATTT GGTTTTT AGC AAAAACC TTTGGCTTGTTGTTT HY04AAS1_0749 681305 - 682318 + | NADH dehydrogenase (quinone) HY04AAS1_0750 682329 - 682937 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein HY04AAS1_0751 682925 - 683422 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HY04AAS1_0752 683415 - 683711 + | NADH-ubiquinone oxidoreductase chain 4L TERM 505 685054 - 685066 + G 80 -6.3 -4.93318 | AATGAGCTTTCCAAT GCTTA TAC TAAGC TTTTTATCGCTTATG HY04AAS1_0753 683711 - 685612 + | proton-translocating NADH-quinone oxidoreductase, chain L TERM 506 685731 - 685715 - g 71 -5.2 -4.56887 | opp_overlap 685715 GAAAAATTTACAAAA CCAATA GCTTT TATTGG TTCTTTAGTTACATT HY04AAS1_0754 685613 - 687118 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 507 687411 - 687421 + G 73 -5.4 -4.59853 | TAGTTCTCACGCTGA TGGT ATT ACCA TTTTTACACACTTAC TERM 508 687815 - 687801 - g 71 -4.2 -4.82901 | opp_overlap 687802, overlap 687802 CTTTTGCTATAAAAA TCGGTA TAA TACCGT TTCACTTTTGGCTTC TERM 509 687802 - 687814 + G 74 -7.7 -3.94333 | opp_overlap 687801 687802 TTTTGCTATAAAAAT CGGTA TAA TACCG TTTCACTTTTGGCTT HY04AAS1_0755 687122 - 688603 + | proton-translocating NADH-quinone oxidoreductase, chain N HY04AAS1_0756 688609 - 688980 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 TERM 510 689059 - 689046 - g 74 -3.9 -5.1925 | opp_overlap 689046 GTAGAAGTTAAAAAA GATAA ATTA TTATC TATAGTTTATGTACA TERM 511 689166 - 689185 + G 74 -4.4 -5.02502 | gap 1, overlap 689166 689167 GTAGATACTTTGGAA G-CTCAAAA CCG TTTTGAGGC TTTTTATATACTATA HY04AAS1_0757 688980 - 690695 + | NADH-ubiquinone oxidoreductase chain 49kDa TERM 512 691050 - 691025 - g 91 -9.9 -4.57353 | GGTTACGATATAAAA CCTATACTTAC AGAT GTAAATATAGG CATAATAATGGCGTT HY04AAS1_0758 690692 - 691738 + | NADH dehydrogenase (quinone) TERM 513 691767 - 691755 - g 71 -4.9 -4.59944 | opp_overlap 691755 ATTATGATAAAGAAA GTTTT TGA AAAAC CTTTAAACTTTTTAG HY04AAS1_0759 691743 - 692369 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 514 692737 - 692723 - g 89 -5.8 -5.34655 | TAACTAAAAATAAAA TTATAG AAA CTATAA CAAAAAACTATGGAA HY04AAS1_0760 692362 - 692883 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HY04AAS1_0761 692876 - 693208 + | NADH-ubiquinone oxidoreductase chain 4L TERM 515 694554 - 694566 + G 80 -6.3 -4.93318 | AATGAGCTTTCCAAT GCTTA TAC TAAGC TTTTTATCGCTTATG HY04AAS1_0762 693211 - 695049 + | proton-translocating NADH-quinone oxidoreductase, chain L HY04AAS1_0763 695042 - 696520 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 516 696809 - 696797 - g 85 -2.7 -5.79588 | overlap 696798 TCAAAAGCAAAAAAA CTTTC GTA GAAAA TGTATATACGTTTCT TERM 517 697676 - 697686 + G 86 -5.4 -5.36314 | TAGGTCTTGTAAATT CCAA CGC TTGG TTTTTTGCTATTTTG HY04AAS1_0764 696520 - 697914 + | proton-translocating NADH-quinone oxidoreductase, chain N TERM 518 698045 - 698059 + GF 72 -3.6 -4.96848 | GCCAACGAAAAAGAC GGTATA GAT TATATC TTTTTATCTGAGCAA HY04AAS1_0765 697907 - 698557 + | Guanylate kinase HY04AAS1_0766 698532 - 698759 + | DNA-directed RNA polymerase, omega subunit TERM 519 699262 - 699252 - g 78 -4 -5.35459 | AGAGACTATAAAAAA CTTT AAC AAAG ATATGCTTCTTGATT TERM 520 699751 - 699728 - g 74 -4 -5.24531 | gap 1, overlap 699730 699731 AGCTTTTAGAAAAAA TATC-TCATCT AAA AGATGAAGACA TACAAAAAGCTAAAA HY04AAS1_0767 698740 - 699987 + | peptidase M16 domain protein HY04AAS1_0768 699984 - 701339 + | beta-lactamase domain protein HY04AAS1_0769 701332 - 701424 + | hypothetical protein HY04AAS1_0770 701425 - 702564 + | hypothetical protein HY04AAS1_0771 702824 - 702549 - | hypothetical protein TERM 521 702647 - 702637 - G 74 -4 -5.17353 | ATACCTATCAAAAAA GATA CCA TATC AAAAGCTATGTGCTT HY04AAS1_0772 705751 - 702866 - | SMC domain protein TERM 522 705216 - 705237 + g 80 -6.7 -4.80289 | gap 1 TTTAAATCTTTTTTT TGAGA-AGCT GCA AGCTCTCTCA TTTTATCTATTTTAT HY04AAS1_0773 706101 - 705748 - | Rhodanese domain protein TERM 523 706111 - 706097 - G 78 -8.6 -3.80625 | opp_overlap 706097 706096 706099 TCTTCAGAAGGTAAA GACATG CTC CATGTC CCTTTTTACTTCCAA HY04AAS1_0774 706462 - 706085 - | aspartate 1-decarboxylase HY04AAS1_0775 709342 - 706529 - | isoleucyl-tRNA synthetase TERM 524 708317 - 708305 - G 81 -9.1 -4.09864 | opp_overlap 708303 708301 708305 ATCCACCGGTGAAAA CGGCT CTA AGCCG TATCTTAATCCTACT TERM 525 708305 - 708317 + g 71 -9.1 -3.14961 | opp_overlap 708305, overlap 708303 708301 ATCCACCGGTGAAAA CGGCT CTA AGCCG TATCTTAATCCTACT TERM 526 708487 - 708497 + g 70 -2.6 -5.1615 | opp_overlap 708487, overlap 708474 CTTTTAAAGAAGCTA TAAA CTC TTTA TTTTTTACATATTGA TERM 527 708547 - 708532 - G 76 -6.2 -4.63218 | GCTTTTCCAACAAAA GAAGAT AGTT ATCTTC CTCAACAACCACGTA TERM 528 710209 - 710197 - g 78 -6.3 -4.7339 | AAGAAAGTGCAAAAA TCTTC CCA GAAGA GGTAATGCCAGTATT TERM 529 710646 - 710657 + G 83 -5.8 -5.24531 | opp_overlap 710639 ATAGATTATAGGGCA TCCC TACC GGGA TTTTTTATACCAGAT HY04AAS1_0776 709680 - 710897 + | hypothetical protein HY04AAS1_0777 710923 - 711870 + | tetraacyldisaccharide 4'-kinase HY04AAS1_0778 711857 - 712606 + | hypothetical protein TERM 530 712860 - 712872 + G 70 -3.4 -4.9725 | opp_overlap 712860 TGCTGACGCTATACA TCCA GGTTA TGGA TTTTTATCTGAAAAT HY04AAS1_0779 712627 - 714054 + | acetyl-CoA carboxylase, biotin carboxylase TERM 531 714173 - 714156 - g 81 -2.7 -5.60864 | overlap 714158 GACACATCAAAAAAA GACTTTT CAAT AAAAGAC GGAGTCGGTTTTGCA TERM 532 714459 - 714432 - g 79 -5 -5.09173 | GAAGATGCTAAAAAA GATGTTATAAAA AGCA TATTACAACATC TTGGAAAAGTTTATG HY04AAS1_0780 714051 - 714794 + | pyrroline-5-carboxylate reductase TERM 533 716084 - 716071 - g 70 -8.1 -3.31564 | opp_overlap 716067 716063 ATATGACGAAATAGA CGCTG GCAC CAGCG GTGAGGCTTCTATAT HY04AAS1_0781 714791 - 716335 + | SMC domain protein TERM 534 716868 - 716858 - g 74 -4 -5.08169 | opp_overlap 716867, overlap 716867 ATATATCTTAAAAAA TCTT TAG AAGA TGAAGCATCTTATGG HY04AAS1_0782 716369 - 717373 + | efflux transporter, RND family, MFP subunit TERM 535 717617 - 717637 + G 70 -8.3 -3.41229 | opp_overlap 717616 717620, overlap 717620 TGACAGACGTAAGAT CAAGAACTG GAC CAGGTCTTG TTATGCTAAACGTAT TERM 536 720099 - 720115 + G 71 -9.5 -2.5185 | overlap 720098 720096 GCTTTTGGTTTTAAG CGTTGTT GTA AACAACG GTATCTTGATATTTG HY04AAS1_0783 717370 - 720417 + | acriflavin resistance protein HY04AAS1_0784 720468 - 721331 + | ribosomal L11 methyltransferase TERM 537 722340 - 722320 - g 76 -4.8 -4.91109 | opp_overlap 722320 CCGGTAGTATAAAAA TAGGTTCT GTTGG AAAACCTA TTCCTGGGGTAGAAG TERM 538 722840 - 722824 - g 85 -3.7 -5.61881 | TTGGAAAAATAAAAA GGTTTTT GTT AAAAGCC CAAGACAACGTACCA HY04AAS1_0785 721332 - 723806 + | AMP-dependent synthetase and ligase HY04AAS1_0786 723890 - 725473 + | D-3-phosphoglycerate dehydrogenase TERM 539 725575 - 725561 - g 74 -4.2 -4.89393 | opp_overlap 725563 725565, overlap 725563 TAAACGCTATAAAAA GAGGCT ACA AGCCTG TGGTGGTGTCCTCAG TERM 540 725573 - 725563 - g 70 -6.8 -4.05669 | opp_overlap 725563 725565, overlap 725561 AACGCTATAAAAAGA GGCT ACA AGCC TGTGGTGGTGTCCTC HY04AAS1_0787 725470 - 726684 + | aspartate kinase TERM 541 727199 - 727186 - g 76 -2.4 -5.4505 | GTCTTTAATAAAAAA CTAC CCTTTT GTAG CAGCAGATCCAAAAC HY04AAS1_0788 726674 - 727600 + | PfkB domain protein HY04AAS1_0789 727902 - 727597 - | hypothetical protein HY04AAS1_0790 728007 - 729278 + | outer membrane efflux protein TERM 542 729461 - 729432 - g 83 -5.9 -5.23765 | CAAACAATATAAAAA TAGTAAAAGTAAA AGTT TCCACCTTTACTA AAAGCCTAAAACTCC HY04AAS1_0791 729275 - 730396 + | efflux transporter, RND family, MFP subunit TERM 543 731136 - 731117 - g 84 -4.4 -5.43487 | overlap 731119 731132 AAATGATATAAAAAA TATAGTTT TAAC AAACTACA ACGGTACGCCTATCA TERM 544 733021 - 733032 + G 71 -4.4 -4.74917 | overlap 733011 CAGTGGCTGTTTTCA TAGC TTTG GCTA TTTTGTATCTTTACT HY04AAS1_0792 730401 - 733484 + | heavy metal efflux pump, CzcA family HY04AAS1_0793 734900 - 733635 - | natural resistance-associated macrophage protein TERM 545 733792 - 733782 - G 73 -3.2 -5.13016 | AAGCAAAAGTAAAAA CAAC AAG GCTG GTGGTAATAAAAACG HY04AAS1_0794 736343 - 734922 - | Carbohydrate-selective porin OprB TERM 546 735433 - 735416 - G 80 -9.9 -3.48395 | ACTCTGTGCATATAA CAGGGTA ATCA TACCCTG CCAAAGCTCCATTTG HY04AAS1_0795 738059 - 736560 - | drug resistance transporter, EmrB/QacA subfamily TERM 547 736729 - 736739 + g 72 -4 -5.06414 | GCTTTTGCCAATATT TTTG AAT CAAA TTTTTCTTCAAAAAG HY04AAS1_0796 738124 - 738390 + | transcriptional coactivator/pterin dehydratase TERM 548 738731 - 738743 + G 73 -5.5 -4.66833 | overlap 738712 GAAAATCCTTTTTAC GCATC TTT GGTGC TTTTTAGCATTACAC HY04AAS1_0797 738395 - 739666 + | glycosyl transferase family 39 HY04AAS1_0798 739728 - 740498 + | TraT complement resistance family protein HY04AAS1_0799 741293 - 740589 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HY04AAS1_0800 742567 - 741290 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 549 741721 - 741731 + g 73 -5.4 -4.57837 | CTGGAGCCACTCTTT CCAT AAT ATGG TTTTTAGCCCCATAT HY04AAS1_0801 743362 - 742592 - | hypothetical protein TERM 550 744500 - 744486 - g 78 -3.6 -5.41143 | GAGGTTTCAAAAAAA TCTTCT AAA AAAAGA AAATCTTCTAAAAAA HY04AAS1_0802 743535 - 745301 + | 4-alpha-glucanotransferase HY04AAS1_0803 745295 - 746083 + | hypothetical protein HY04AAS1_0804 747040 - 746072 - | histidine kinase TERM 551 746784 - 746794 + g 74 -4 -5.24129 | AAAAATACATTGGTA TCTT TCA AAGA TTTTTTGTACAAAAC TERM 552 746897 - 746886 - G 76 -5.8 -4.6038 | GATATTAAATTAAAA GGTC TTAA GACC TCATAATAAGATTTA HY04AAS1_0805 748350 - 747037 - | heat shock protein HslVU, ATPase subunit HslU HY04AAS1_0806 748651 - 748340 - | preprotein translocase, YajC subunit TERM 553 748493 - 748510 + g 70 -2.7 -5.12707 | opp_overlap 748493, overlap 748494 CCATATACCAGATGA TGTGATA ACTT TATCACC TTTTTTCAGATTTGA TERM 554 748602 - 748580 - G 71 -5 -4.57882 | opp_overlap 748586, overlap 748586 TTTAATAATAAGAAA GTAAAATATT ACA AATATTATAC CTATAAATACCAACT HY04AAS1_0807 749710 - 748664 - | geranylgeranyl reductase HY04AAS1_0808 749993 - 749694 - | histone family protein DNA-binding protein HY04AAS1_0809 751820 - 750015 - | glucosamine/fructose-6-phosphate aminotransferase, isomerizing TERM 555 751011 - 750994 - G 70 -5.7 -4.38313 | ATATCAAATGGAAAA TTTATCT CTTC AGATAAA AATCCCCTTACGGTA HY04AAS1_0810 752916 - 751822 - | Radical SAM domain protein HY04AAS1_0811 753757 - 752981 - | cyclic nucleotide-binding protein TERM 556 753442 - 753432 - GR 70 -5.4 -4.37886 | opp_overlap 753432 753430 753433, overlap 753433 CCACTTCCCACAAAA GGTT CAA AACC TATTTTGAACTGCTT TERM 557 753452 - 753433 - GR 71 -8 -3.2241 | opp_overlap 753432 753430 753433, overlap 753432 CACTTCCCACAAAAG GTTCAAAA CCTA TTTTGAAC TGCTTTGCAAACTTC HY04AAS1_0812 754016 - 753714 - | preprotein translocase, SecG subunit HY04AAS1_0813 754765 - 754043 - | 6-carboxyhexanoate/CoA ligase HY04AAS1_0814 756825 - 754768 - | methyl-accepting chemotaxis sensory transducer TERM 558 755062 - 755074 + g 71 -4.9 -4.58283 | TGTAATATTATTTAT CATAT CGG ATATG TTTTTAGCAAAATTG TERM 559 756425 - 756443 + g 73 -3.2 -5.11613 | TTATCTTTTACCTCG CTTTTTGT ATA AGAAAAAG TTTTTTGCCTCATGT HY04AAS1_0815 757546 - 756893 - | transaldolase HY04AAS1_0816 757608 - 758882 + | dihydroorotase, multifunctional complex type HY04AAS1_0817 759496 - 758879 - | putative phage repressor HY04AAS1_0818 760320 - 759493 - | tRNA synthetase valyl/leucyl anticodon-binding HY04AAS1_0819 762717 - 760336 - | diguanylate cyclase/phosphodiesterase TERM 560 761214 - 761200 - G 73 -5.7 -4.63218 | opp_overlap 761200 761199 761213 TTCTTTTGAACAAAA CGCTT TAGAT AAGCG CTTATTTTGAGTGTT TERM 561 761709 - 761721 + g 71 -4.9 -4.63218 | opp_overlap 761709 TGTGTAAAGAATCTA TATCT GTA AGATA TTTTCTTGCCACAAA TERM 562 762814 - 762797 - R 75 -8.3 -3.60587 | overlap 762798 ATAAAATGGATAGAA TGGGGGC TGAG GCCCCCC CGACCCCGTATAGAA TERM 563 762813 - 762798 - R 87 -11.8 -2.75268 | overlap 762797 TAAAATGGATAGAAT GGGGGC TGAG GCCCCC CCGACCCCGTATAGA HY04AAS1_0820 763072 - 762833 - | hypothetical protein HY04AAS1_0821 763371 - 763075 - | hypothetical protein TERM 564 763342 - 763352 + g 70 -2.6 -5.13741 | CGCAATTACCATTGT TATT AAG AATA TTTTTCTTCCCTTGC HY04AAS1_0822 764297 - 763368 - | cytochrome C oxidase mono-heme subunit/FixO HY04AAS1_0823 765729 - 764311 - | Cytochrome-c oxidase HY04AAS1_0824 766632 - 765742 - | cytochrome c class I HY04AAS1_0825 768600 - 766807 - | hypothetical protein HY04AAS1_0826 771100 - 768605 - | protein of unknown function DUF1078 domain protein TERM 565 769138 - 769120 - G 71 -5.2 -4.57073 | opp_overlap 769122 769123, overlap 769122 769123 CACTGGCGCTAAAAA GACCCAGC AAC GCTGGATT TGAATCTATTAAAGA TERM 566 769136 - 769122 - G 74 -7.8 -3.90048 | opp_overlap 769122 769123, overlap 769120 769123 CTGGCGCTAAAAAGA CCCAGC AAC GCTGGA TTTGAATCTATTAAA TERM 567 769135 - 769123 - G 70 -9.1 -2.93708 | opp_overlap 769122 769123, overlap 769122 769120 TGGCGCTAAAAAGAC CCAGC AAC GCTGG ATTTGAATCTATTAA HY04AAS1_0827 771374 - 771102 - | hypothetical protein HY04AAS1_0828 772342 - 771371 - | DNA polymerase III delta TERM 568 771458 - 771473 + g 75 -9 -3.62096 | TTTTATGCTCATATC GGCTCT TTGA AGAGCC TTTACAATACTAAAA HY04AAS1_0829 773159 - 772335 - | acetyl-CoA carboxylase, carboxyl transferase, beta subunit HY04AAS1_0830 774000 - 773161 - | pantoate/beta-alanine ligase HY04AAS1_0831 775437 - 774013 - | Undecaprenyl-phosphate galactose phosphotransferase, WbaP TERM 569 775430 - 775417 - G 70 -3.1 -4.99056 | TAATATAAGCAAAAA GATTC TTAA GAACC TTCTCATTAGAGTAA HY04AAS1_0832 776951 - 775437 - | Mg chelatase, subunit ChlI TERM 570 776156 - 776168 + g 73 -6.3 -4.43501 | overlap 776152 TTGCATGTGGTGACG CAAAG GGT CTTTG TTTTATAAGTGAGTT HY04AAS1_0833 778290 - 776941 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase HY04AAS1_0834 779376 - 778300 - | protein of unknown function DUF43 TERM 571 779429 - 779450 + H 70 -4.5 -4.7878 | overlap 779426 779430 CAATTCGAGCTATTA TGCTTAAGT ATAA ATTTAAGCG TTTATTTTATAGCTA TERM 572 779912 - 779879 - g 88 -4.8 -5.56264 | gap 1 GCCAAATACAAAAAA CCAACACTTGTATTG GCCCA CAATA-AAACGTTGG CAGCACAGCTTTACA TERM 573 779932 - 779942 + G 73 -5.4 -4.56597 | opp_overlap 779932 ACAGCTTTACAGAGA GTTC AAA GAAC TTTTTCCAAACAACG HY04AAS1_0835 779708 - 781693 + | excinuclease ABC, B subunit HY04AAS1_0836 781700 - 782200 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family TERM 574 782577 - 782562 - g 76 -7.6 -4.16842 | opp_overlap 782562 CCTATGGTGAAGAAA GCGTAT CTGA ATACGC TATAATGCTTATGTT TERM 575 782837 - 782847 + G 70 -5.4 -4.42788 | TTTAACGAGCTTTTA TCTG TTT CAGA TTTTATCACATTACA TERM 576 782927 - 782915 - g 74 -4.9 -4.74285 | ATGGACAATATAAAA CTTTT CAA AAAAG GAAGTTTTCTTATAA HY04AAS1_0837 782261 - 783259 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 577 784199 - 784188 - g 76 -5.8 -4.69559 | AAAGCCTAAAACAAA GCTC CGAT GAGC TAAACCAAATACTGG HY04AAS1_0838 783311 - 784882 + | virulence factor Mce family protein HY04AAS1_0839 786258 - 784879 - | hypothetical protein TERM 578 787239 - 787256 + r 75 -8.4 -3.74693 | TCACCGGCGGCTCCA CCCCTC CCGAAA GAGGGG TTTCCTAGCCTCCCA TERM 579 788869 - 788880 + r 76 -7.2 -4.2354 | AGGCTCTATTTCACT CCCC TTCC GGGG TTCTTTTCGCCTTTC TERM 580 789735 - 789754 + r 72 -9.2 -2.65808 | opp_overlap 789726 789723, overlap 789732 AAAGGAGGTGATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 581 790642 - 790658 + r 72 -8.7 -3.07487 | overlap 790641 GTTCGGAATGCCTTG CCGAAGT TGA GCTTCGG GTTTTGACAATCTGC HY04AAS1_0840 794117 - 791427 - | (Glutamate--ammonia-ligase) adenylyltransferase TERM 582 793102 - 793115 + g 73 -3.1 -5.08824 | opp_overlap 793112, overlap 793103 CTATACGTATTGCCA TCTCT CAAA AGAGG TTTTTTACCTCCAAG TERM 583 793201 - 793213 + g 85 -4.1 -5.64328 | overlap 793201 793207 GTTTTCACATTGTAA CCTTT TGA AAGGG TTTTCTTTTTTTGTT TERM 584 793207 - 793218 + g 85 -3 -5.88565 | overlap 793201 793201 ACATTGTAACCTTTT GAAA GGGT TTTC TTTTTTTGTTCTAAC HY04AAS1_0841 794505 - 794110 - | thioesterase superfamily protein HY04AAS1_0842 794927 - 794469 - | ferric uptake regulator, Fur family HY04AAS1_0843 794995 - 795630 + | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family HY04AAS1_0844 795632 - 795811 + | hypothetical protein HY04AAS1_0845 795804 - 796742 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase HY04AAS1_0846 796739 - 798019 + | diguanylate cyclase/phosphodiesterase HY04AAS1_0847 798019 - 798639 + | riboflavin synthase, alpha subunit TERM 585 798732 - 798722 - g 84 -3.2 -5.69976 | AGAAAAAAAAGAAAA GCCT TAG AGAC AAAGCGGGCCATAGT HY04AAS1_0848 798647 - 799261 + | transcriptional regulator, TetR family HY04AAS1_0849 799258 - 800511 + | outer membrane efflux protein HY04AAS1_0850 800498 - 801637 + | secretion protein HlyD family protein HY04AAS1_0851 801685 - 802992 + | RNA modification enzyme, MiaB family HY04AAS1_0852 803790 - 802963 - | CinA domain protein HY04AAS1_0853 805523 - 803787 - | Peptidoglycan glycosyltransferase TERM 586 805122 - 805108 - G 70 -8.6 -2.93723 | opp_overlap 805100 805107 TTGGTATCAAGTATA GCTTGT TCT ACAAGC CCTTTGTCAGACTGT HY04AAS1_0854 805762 - 805520 - | hypothetical protein HY04AAS1_0855 806633 - 805743 - | S-adenosyl-methyltransferase MraW HY04AAS1_0856 807555 - 806626 - | histone deacetylase superfamily HY04AAS1_0857 808319 - 807552 - | ribonuclease PH HY04AAS1_0858 808939 - 808328 - | putative biotin biosynthesis protein TERM 587 809205 - 809176 - g 86 -4.3 -5.61689 | overlap 809178 809179 809181 AAAAGGAACAAAAAA CACCATCTGGTAT CATT ATACCAGATACGG CCAAAGAAAAACCTC TERM 588 809203 - 809178 - g 70 -5.5 -4.40357 | overlap 809176 809179 809181 AAGGAACAAAAAACA CCATCTGGTAT CATT ATACCAGATAC GGCCAAAGAAAAACC TERM 589 809202 - 809179 - g 71 -9 -3.21774 | overlap 809178 809176 809181 AGGAACAAAAAACAC CATCTGGTAT CATT ATACCAGATA CGGCCAAAGAAAAAC TERM 590 809200 - 809181 - g 75 -9.4 -3.14667 | overlap 809179 809178 809176 GAACAAAAAACACCA TCTGGTAT CATT ATACCAGA TACGGCCAAAGAAAA TERM 591 809232 - 809217 - g 84 -4.7 -5.27938 | ACGGCCAAAGAAAAA CCTCA AGTAGG TGAGG TAATAGCAGTAGGTA HY04AAS1_0859 809112 - 809402 + | chaperonin Cpn10 TERM 592 809690 - 809676 - g 73 -5.7 -4.60889 | AAGTAGCTTCAAAAA CTGCT GATGT AGCAG GTGATGGTACCACTA TERM 593 810967 - 810955 - g 82 -7.7 -4.37658 | AACCGCTTTACAAAA TGCAG CAT CTGCA GCCGGAACAATGCTA HY04AAS1_0860 809435 - 811066 + | chaperonin GroEL TERM 594 811078 - 811100 + T 93 -11.2 -3.97388 | opp_overlap 811071 TTAATAAATCTTTAA GGCCTCCCCA TTT TGGTGGGGCC TTTATAATCACATAT HY04AAS1_0861 812474 - 811074 - | glycosyl transferase family 39 TERM 595 812207 - 812194 - G 89 -5.9 -5.34632 | opp_overlap 812195, overlap 812144 812195 AATAAAACACAAAAA GCCCC GGCA AGGGC GGAGGGTAATCTCAG HY04AAS1_0862 813726 - 812452 - | deoxyguanosinetriphosphate triphosphohydrolase HY04AAS1_0863 813761 - 814384 + | phosphoribosyl-ATP diphosphatase HY04AAS1_0864 814438 - 814791 + | iron-sulfur cluster assembly accessory protein TERM 596 814809 - 814831 + F 100 -13.5 -5.14563 | AAAATATTTCTGTCC CAAGCCTGC ATAGA GCAGGCTTG TTTTTTCATGAAAAG TERM 597 815733 - 815717 - g 83 -9.5 -3.85389 | CTTTAACAACCTAAA TAGAGGA AAT TCCTCTA CACTACCAAGTGGAT HY04AAS1_0865 814932 - 815789 + | hypothetical protein HY04AAS1_0866 816706 - 815798 - | protein of unknown function DUF185 HY04AAS1_0867 816723 - 817157 + | ribosomal-protein-alanine acetyltransferase HY04AAS1_0868 817422 - 817171 - | hypothetical protein TERM 598 817208 - 817231 + gT 74 -6.6 -4.20932 | overlap 817210 TTATTAAAATTTGCT ATGGCTTGGG CTAA CCCAAGCCTC TTTTCGCTAGCTATT TERM 599 817210 - 817229 + gT 100 -13.6 -3.6993 | overlap 817208 ATTAAAATTTGCTAT GGCTTGGG CTAA CCCAAGCC TCTTTTCGCTAGCTA HY04AAS1_0869 817807 - 817376 - | flagellar protein FliS HY04AAS1_0870 819205 - 817820 - | Flagellar capping protein-like HY04AAS1_0871 819622 - 819209 - | flagellar protein FlaG protein HY04AAS1_0872 820119 - 819667 - | endodeoxyribonuclease RusA TERM 600 822189 - 822202 + G 70 -3.1 -5.0133 | opp_overlap 822182, overlap 822190 TTCAAAAGCTTATTA TTCTC ATAA GAGAG TTTTTTGGAAGCATG TERM 601 822366 - 822340 - g 70 -6.7 -4.10407 | AGATGAAGAAGTAAA TGTTCTAATAG AAAAG CTATTAGGACA CCTTAAAGAAGAGGG HY04AAS1_0873 820136 - 822403 + | phenylalanyl-tRNA synthetase, beta subunit HY04AAS1_0874 822622 - 823179 + | 5-formyltetrahydrofolate cyclo-ligase TERM 602 823546 - 823530 - g 72 -8.1 -3.53779 | TCTTCAAAAGAGCAA TCTCTTT TAC AAAGAGA GAGAAGCTTAGAGTC HY04AAS1_0875 823161 - 824888 + | RNA binding metal dependent phosphohydrolase TERM 603 825992 - 826008 + G 74 -4.4 -4.90906 | AAGAGATTACTATAG CGCTTT AGATA AAGGCG TTTTTCCTATTATGA HY04AAS1_0876 824946 - 826319 + | oxygen-independent coproporphyrinogen III oxidase TERM 604 826566 - 826578 + G 70 -2.6 -5.23765 | overlap 826560 826559 TATTTACCTCTTATA GCCT CTATA GGGC TTTTTGTATTCTTTG HY04AAS1_0877 826374 - 827027 + | ATP synthase F0, A subunit HY04AAS1_0878 827029 - 827436 + | hypothetical protein HY04AAS1_0879 827447 - 827794 + | ATP synthase F0, C subunit HY04AAS1_0880 827996 - 828202 + | protein of unknown function DUF37 TERM 605 829162 - 829174 + G 77 -2.7 -5.45802 | opp_overlap 829154 ATAAAAACCGGAAAC TGGAT AAT ATCTA TTTTTGTTTTGACAC HY04AAS1_0881 828202 - 829746 + | 60 kDa inner membrane insertion protein TERM 606 830411 - 830386 - g 79 -7 -4.48483 | TACAACAAACATAAA GATGAGTTTA AAATAG TAAACCCATC ATCTATAATATATTG HY04AAS1_0882 829765 - 831075 + | hypothetical protein HY04AAS1_0883 831093 - 832061 + | 3-dehydroquinate synthase HY04AAS1_0884 832058 - 832717 + | Ribulose-phosphate 3-epimerase TERM 607 832776 - 832759 - g 90 -4.1 -5.79526 | overlap 832761 832762 ACATTCTAAAAAAAA CATCATC TTTT GAAGATG CAATCCATCTTGAAA TERM 608 832895 - 832884 - g 73 -5.8 -4.44548 | TATACTGAAGCAAAA GGCT TAAA AGCC CTAAGAGATGCTATA TERM 609 832974 - 832988 + G 74 -4.2 -5.00923 | ATCATCATAACTACT GGTTCT TCA GGAGCC TTTTCTTTGATATTT HY04AAS1_0885 832710 - 833807 + | aminotransferase class I and II HY04AAS1_0886 833843 - 834685 + | spermidine synthase TERM 610 834794 - 834780 - g 71 -5 -4.57073 | TATTCTTGCTAAAAA CCTAAA AAA CTTAGG CCACCATGTGGAAGT TERM 611 834890 - 834915 + G 70 -3.3 -4.96848 | opp_overlap 834881 834891 834894, overlap 834891 ACGAAGGTATTACAT ACAATGTCTTC ACCA GAAGAGATTGG TTTTTATATCAGCAC HY04AAS1_0887 834697 - 836217 + | hypothetical protein HY04AAS1_0889 838310 - 836832 - | Na+/solute symporter HY04AAS1_0888 836222 - 836899 + | DNA-(apurinic or apyrimidinic site) lyase TERM 612 838045 - 838026 - GT 100 -8.6 -5.07567 | TGAGACTGCAAAAAA CTTTGGCA TAAC CGCCAAAG CCACTCCGAATCCCA HY04AAS1_0890 838479 - 838303 - | hypothetical protein HY04AAS1_0891 838538 - 839818 + | Histidinol dehydrogenase HY04AAS1_0892 839815 - 840357 + | hypothetical protein TERM 613 840426 - 840408 - g 78 -6 -4.76193 | AAGCACAACATAAAA CAAGAGGT CAA ACATCTTG AGAGAAAACCAAAGC HY04AAS1_0893 840354 - 841190 + | Methenyltetrahydrofolate cyclohydrolase HY04AAS1_0894 841187 - 843289 + | DNA ligase, NAD-dependent TERM 614 843391 - 843401 + G 70 -5.4 -4.41348 | opp_overlap 843391 843395 843398 ATCAAAGTTGTAAAA GAAG CTA CTTC TTTGTTTAACGAAAA HY04AAS1_0895 843301 - 843963 + | hypothetical protein HY04AAS1_0896 844451 - 843960 - | Domain of unknown function DUF1791 HY04AAS1_0897 845044 - 844460 - | hypothetical protein HY04AAS1_0898 846330 - 845041 - | protein of unknown function DUF224 cysteine-rich region domain protein TERM 615 845786 - 845808 + g 72 -9.4 -2.62267 | opp_overlap 845786, overlap 845785 845784 ATCGGCATCAAGTTA TCTTTTAAAA AGC TTTTAAAAGA ATGTTCGTTTATAGG TERM 616 845808 - 845786 - G 71 -9.4 -2.56715 | opp_overlap 845785 845784 845786 ATCGGCATCAAGTTA TCTTTTAAAA AGC TTTTAAAAGA ATGTTCGTTTATAGG TERM 617 846340 - 846353 + r 72 -2.5 -5.48063 | AGGCATAAACACCTC TTATA AAAC TATAA TTTTTTCTGTTAAAT TERM 618 846380 - 846402 + r 75 -4.8 -5.00467 | opp_overlap 846382, overlap 846382 AAATTACTTATAAAA AAGGAGGG CTTTGGC CCCTCCTA TTTTGTTATTATTAG TERM 619 846382 - 846400 + r 74 -7.4 -4.10348 | opp_overlap 846382, overlap 846380 ATTACTTATAAAAAA GGAGGG CTTTGGC CCCTCC TATTTTGTTATTATT TERM 620 846400 - 846382 - R 91 -7.4 -5.28778 | opp_overlap 846380 846382 ATTACTTATAAAAAA GGAGGG CTTTGGC CCCTCC TATTTTGTTATTATT HY04AAS1_0899 846848 - 846414 - | Rubrerythrin TERM 621 846809 - 846822 + g 70 -6.7 -4.06179 | overlap 846805 846804 846802 CAAATGCATGTTTGA GACAC TCAA GTGTC TTTGTGCCTTTTAAG TERM 622 847116 - 847106 - g 74 -4 -5.16237 | AACTGTATTAAAAAA CTTT GAC AAAG ATATAGAAAATGGTG HY04AAS1_0900 846960 - 847394 + | hypothetical protein HY04AAS1_0901 847394 - 848182 + | hypothetical protein TERM 623 848513 - 848494 - gf 90 -8.6 -4.56961 | gap 1 AAGAGCTAGACAAAA TCCCCA-CC GAC GGCTGGGGA CACAAGTTTTACTAT HY04AAS1_0902 848187 - 848621 + | general secretion pathway protein G HY04AAS1_0903 848593 - 848877 + | hypothetical protein HY04AAS1_0904 848874 - 849359 + | hypothetical protein TERM 624 849377 - 849363 - f 79 -3.6 -5.54907 | TTGATAAAATAAAAA TTATGT TTA ACACAA AAAATGCGATAACAA TERM 625 849894 - 849883 - g 74 -4.4 -4.89729 | opp_overlap 849885 CATAAAATTGAAAAA TGGT ACTT ACCA AGTAGGTGCTTTTAA TERM 626 849975 - 849988 + G 70 -5.3 -4.40804 | opp_overlap 849975 AACGTGCAACAATTA TCCAT CAAA ATGGA TTTTATAAGGTGATC HY04AAS1_0905 849365 - 850012 + | hypothetical protein HY04AAS1_0906 851226 - 850009 - | N-acetylmuramoyl-L-alanine amidase HY04AAS1_0907 852892 - 851177 - | hypothetical protein TERM 627 852212 - 852194 - GH 77 -8.8 -3.5944 | opp_overlap 852193 AGCCACATCTTTAAA GGGCTTTG GCT CTAAGCCC ATAATATCAAATTTT HY04AAS1_0908 852916 - 854622 + | type II secretion system protein E TERM 628 855211 - 855221 + G 75 -5.4 -4.77757 | opp_overlap 855211, overlap 855206 AATATATATAAAAAA CCTA TTT TAGG TTTTCATTTTTCCGC TERM 629 855221 - 855211 - g 88 -5.4 -5.46276 | opp_overlap 855206 855211 AATATATATAAAAAA CCTA TTT TAGG TTTTCATTTTTCCGC TERM 630 856877 - 856905 + G 77 -8.3 -3.99013 | opp_overlap 856876 856877 TGATAGACAAAAATC CGTTTTTAGATGA GAA TTATCTAAATACG TTTGTAAGCTTTTTA HY04AAS1_0909 854632 - 857673 + | ADP-heptose:LPS heptosyltransferase-like HY04AAS1_0910 857729 - 858784 + | loricrin HY04AAS1_0911 858851 - 859642 + | hypothetical protein HY04AAS1_0912 859714 - 860652 + | Polyprenyl synthetase TERM 631 861131 - 861111 - g 76 -6.3 -4.54477 | TCAAAAGCCATAAAA CATATATTT TTC AAATACATG TCAAAACCACACTCT HY04AAS1_0913 860652 - 861878 + | protein of unknown function DUF21 HY04AAS1_0914 861939 - 862133 + | hypothetical protein TERM 632 862148 - 862170 + F 82 -7.7 -4.56597 | opp_overlap 862148 ATATTCATTCCAAAA GCCGGGTAC TCTTT GTATCTGGC TTTTTAAAAAAGAAA HY04AAS1_0915 862357 - 863196 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 633 864093 - 864111 + G 76 -6.8 -4.37337 | TGATTTTGGCTTTTA GTAGATTT AAA AAATCTGC TTTCTTCATGTTTAT HY04AAS1_0916 863186 - 864370 + | Polysulphide reductase NrfD HY04AAS1_0917 864367 - 867435 + | molybdopterin oxidoreductase HY04AAS1_0918 868171 - 867467 - | polysaccharide deacetylase HY04AAS1_0919 868908 - 868168 - | protein of unknown function DUF81 HY04AAS1_0920 870764 - 868905 - | Amino acid transporter-like TERM 634 868964 - 868950 - G 74 -2.8 -5.26918 | opp_overlap 868950 868951 868954, overlap 868951 ATATTCTATAAAAAA GTTCCA ATT TGGAAA TTGTTTTGGCAATTG TERM 635 869152 - 869162 + g 74 -4 -5.09225 | opp_overlap 869144 GGCAATATAAAATGG CTTT TAA AAAG TTTTTTAGGTGGCCT TERM 636 869678 - 869657 - G 70 -6.7 -4.13732 | gap 1 TAAATGAGAAAAATA CGC-TCATAA AGA TTATGATGCG GTGATGAGCGTGAAA HY04AAS1_0921 870952 - 870776 - | hypothetical protein HY04AAS1_0922 871725 - 870949 - | hypothetical protein TERM 637 871279 - 871257 - G 73 -5.6 -4.61231 | opp_overlap 871242, overlap 871247 871258 TTATATCGTTAAAAA CGATACCATA CGT TATGGCACCA TGGTGAGTATGCTTT TERM 638 871689 - 871661 - G 73 -6.8 -4.26188 | gap 2, overlap 871668 CTTATATATTTAAAA GTAGAAACACGGCC CCC GGCCGTG--CCTAC AAAATATATTTCTAT TERM 639 871684 - 871668 - G 100 -13.7 -4.21402 | overlap 871661 ATTTAAAAGTAGAAA CACGGCC CCC GGCCGTG CCTACAAAATATATT TERM 640 871724 - 871711 - G 73 -2.4 -5.252 | opp_overlap 871711 TATTTCTATAAAAAA TCTC CTTTCT GAGA TATCATTCTTCTATT HY04AAS1_0923 871939 - 871727 - | hypothetical protein TERM 641 871839 - 871850 + g 74 -3.6 -5.08178 | ACAACTTCAGCTATA CCGT CTCC GCGG TTTTTATATATCTCT HY04AAS1_0924 872884 - 872009 - | succinyl-CoA synthetase, alpha subunit HY04AAS1_0925 874045 - 872897 - | succinyl-CoA synthetase, beta subunit TERM 642 874162 - 874178 + r 71 -6.7 -4.06491 | overlap 874165 TTAAATATCGATTTT GAATAAA TTA TTTATTC TTTATATAAAGTTGA TERM 643 874233 - 874196 - R 87 -10.7 -3.75418 | gap 1, opp_overlap 874198, overlap 874189 874198 TATATAAAGTTGAAA GATCCGTATGCCCCCGCT AAA AGCAAGGGCATA-GGATT TTATATCACTTAAGA TERM 644 874198 - 874231 + r 90 -8.9 -4.57474 | gap 1, opp_overlap 874198 874196 874189 TATAAAGTTGAAAGA TCCGTATGCCCCCGCT AAA AGCAAGGGCATA-GGA TTTTATATCACTTAA TERM 645 874231 - 874198 - R 100 -13.3 -3.44991 | gap 1, opp_overlap 874198, overlap 874196 874189 TATAAAGTTGAAAGA TCCGTATGCCCCCGCT AAA AGCAAGGGCATA-GGA TTTTATATCACTTAA HY04AAS1_0926 874458 - 874243 - | cold-shock DNA-binding domain protein HY04AAS1_0927 875404 - 874553 - | tRNA pseudouridine synthase B HY04AAS1_0928 876340 - 875405 - | putative RNA polymerase, sigma 70 family subunit HY04AAS1_0929 877783 - 876362 - | protease Do HY04AAS1_0930 878399 - 877788 - | Methyltransferase type 11 HY04AAS1_0931 879423 - 878392 - | biotin/lipoate A/B protein ligase TERM 646 878588 - 878604 + g 73 -6.7 -4.33956 | opp_overlap 878587, overlap 878601 TTTATAATTATATAT TCTAAAA GCC TTTTAGA TTTATCTATTTTAAA HY04AAS1_0932 879866 - 879420 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 647 880121 - 880109 - g 91 -6.3 -5.43974 | overlap 880118 AAAACCAAAGAAAAA CATCA TAA TGATG GGGCCAAACCACACC HY04AAS1_0933 879912 - 880700 + | protein of unknown function DUF52 TERM 648 881024 - 881034 + G 70 -5.4 -4.41956 | opp_overlap 881024 881022 ACGAGAAAAGATATA TCTG ATG CAGA TTTTAATATCTATCT HY04AAS1_0934 880697 - 881176 + | conserved hypothetical gluconokinase HY04AAS1_0935 881361 - 881699 + | nitrogen regulatory protein P-II TERM 649 881815 - 881797 - g 80 -8.8 -3.84451 | overlap 881791 GGCGCCAAAGCTAAA CCACGGTG ATA CAGCGTGG ATGCTGGTAGCAAGC HY04AAS1_0936 881696 - 882997 + | ammonium transporter HY04AAS1_0937 883019 - 884164 + | hypothetical protein HY04AAS1_0938 884197 - 884328 + | putative diguanylate phosphodiesterase HY04AAS1_0939 884469 - 885818 + | hypothetical protein TERM 650 885919 - 885899 - g 78 -9.9 -3.29325 | opp_overlap 885904, overlap 885904 TTTGGACAAGGAAGA TATAAGCTT TTA AAGCTTATA GACAAATACGGTTCT HY04AAS1_0940 885833 - 886624 + | transcriptional regulator, ModE family HY04AAS1_0941 886636 - 887370 + | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 651 887978 - 887989 + G 84 -4.4 -5.4477 | TCTTTGCAATAGCTA TGAG TACT CTCA TTTTTTTACAAATTT HY04AAS1_0942 887371 - 888027 + | molybdate ABC transporter, inner membrane subunit HY04AAS1_0943 888024 - 888653 + | ABC transporter related TERM 652 888676 - 888658 - f 91 -7.6 -5.15969 | overlap 888639 CTTTAATGTAAAAAA TATTACAA AAA TTGTAATA ACTATAACAATTGTT TERM 653 888893 - 888880 - g 78 -6.7 -4.65153 | opp_overlap 888880 888879 888875 TCATATAAAGGAAAA GGTGA AAAA TCACC CTTGCTACTCTCAAG HY04AAS1_0944 888806 - 890215 + | nitrogenase cofactor biosynthesis protein NifB TERM 654 890267 - 890242 - g 100 -9 -5.03994 | CTCTATAGATAAAAA CGCCTGCGTA TCTTGT TACGCATGCG AGGATTTGTGCCCTA HY04AAS1_0945 890219 - 890431 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein HY04AAS1_0946 890428 - 890745 + | nitrogen fixation protein NifW TERM 655 890790 - 890819 + GF 73 -9.3 -2.82623 | gap 1, opp_overlap 890789 890788, overlap 890790 AAATAAGAAATGACG GTACATTCCCAGGG TTA CCCTGGGA-TGAGC TACTTCTACCAAAAG HY04AAS1_0947 890726 - 890974 + | NifZ family protein HY04AAS1_0948 890937 - 891164 + | hypothetical protein HY04AAS1_0949 892054 - 891215 - | modD protein TERM 656 892092 - 892063 - R 100 -7.8 -5.40625 | opp_overlap 892063 892084 ATATCATATAAAAAA CCCAAGACCGGT GGTTAA ACCGGCCATAGG GCTTTATTAAAACTT HY04AAS1_0950 892807 - 892112 - | hypothetical protein TERM 657 892485 - 892501 + g 73 -5.8 -4.44284 | opp_overlap 892485, overlap 892478 TTTACTCTGTAATAA CCGTAC ATAGC GTGCGG TTTTACTATTGGCTT TERM 658 892974 - 892960 - H 81 -2.2 -5.93809 | CTTTTAGAAAAAAAA TACTAT GTT ATAATA AGCTTTTAATGAAAG HY04AAS1_0951 892983 - 894041 + | carbamoyl-phosphate synthase, small subunit HY04AAS1_0952 894042 - 895187 + | major facilitator superfamily MFS_1 TERM 659 895184 - 895167 - T 100 -7.1 -5.36441 | overlap 895182 TTTTTATATAAAAAA TTCTTTG GAAA CAAAGAA TGACTATTCGTCGTG HY04AAS1_0953 895760 - 895188 - | hypothetical protein TERM 660 895624 - 895640 + g 74 -4.5 -4.96848 | overlap 895626 CTATCTGCAAGATAT TTTAAAG GTG CTTTAGA TTTTTCTATACCAAG HY04AAS1_0954 896305 - 895739 - | Aminoacyl-tRNA hydrolase HY04AAS1_0955 896898 - 896305 - | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 661 897240 - 897224 - g 73 -2.2 -5.40072 | GTTGTGGCAAAAAAA TGCGCT TTTTT AGAGCA TATAAAAGTTAAGCT HY04AAS1_0956 896963 - 897493 + | glucose inhibited division protein HY04AAS1_0957 897513 - 899039 + | protein of unknown function DUF1703 HY04AAS1_0958 899748 - 899140 - | NLP/P60 protein HY04AAS1_0959 900091 - 899759 - | TonB-dependent receptor TERM 662 899807 - 899790 - G 78 -5.5 -4.99638 | opp_overlap 899793 899803 899804, overlap 899791 ATACTTACATAAAAA GTACGCC CTTG GGCGTAT TGGGGTCCAAAAACC TERM 663 899806 - 899791 - G 75 -9 -3.58698 | opp_overlap 899793 899803 899804, overlap 899790 TACTTACATAAAAAG TACGCC CTTG GGCGTA TTGGGGTCCAAAAAC TERM 664 900089 - 900072 - G 70 -3.5 -5.01422 | overlap 900068 TCATATAAAAATAAA GCTTTTA AGAT TAAAAAC ACTTGACAAAAGGAC HY04AAS1_0960 900156 - 901493 + | hypothetical protein TERM 665 901514 - 901533 + F 78 -9.2 -3.41125 | opp_overlap 901503, overlap 901516 CTAATATAGCTTTCA TACCCCGC TTTG GCGGGGTC TTATAAATATATGAA TERM 666 901516 - 901531 + F 89 -11.8 -3.27436 | opp_overlap 901503, overlap 901514 AATATAGCTTTCATA CCCCGC TTTG GCGGGG TCTTATAAATATATG HY04AAS1_0961 901544 - 901903 + | hypothetical protein HY04AAS1_0962 901936 - 902172 + | protein of unknown function DUF1703 HY04AAS1_0963 903610 - 902270 - | DNA repair protein RadA HY04AAS1_0964 904344 - 903610 - | protein of unknown function DUF218 TERM 667 904350 - 904332 - G 73 -5.4 -4.58685 | AAATTTTTTTAAAAA GAAAAAAT ATC ATCTTTTC ATACGAGTAGCTATG HY04AAS1_0965 904763 - 904341 - | Biopolymer transport protein ExbD/TolR TERM 668 904575 - 904585 + g 79 -3.2 -5.54264 | TTCAACCCTCATAGT CTGT ACA ACGG TTTTTTTACCTGTTT HY04AAS1_0966 905385 - 904765 - | MotA/TolQ/ExbB proton channel TERM 669 905172 - 905162 - G 76 -3.2 -5.35222 | AAAAGCGATAAAAAA GCCT TTG AAGC GTTTGTGTTTTGAGT HY04AAS1_0967 908061 - 905389 - | Tetratricopeptide TPR_2 repeat protein TERM 670 907109 - 907122 + gr 70 -3.1 -5.04265 | TTTTCTATCATCACA GCTTT TTCT AAGGC TTTTTCGTATTTTTT HY04AAS1_0968 908674 - 908036 - | Phosphoglycerate mutase HY04AAS1_0969 909786 - 908662 - | aminotransferase class V TERM 671 908877 - 908891 + g 70 -6.4 -4.0492 | TTCTAAAGGCTTCCG CATCCA TAT TGGGTG TTTCTATGGCGCTTA HY04AAS1_0970 910208 - 909783 - | Nucleoside-diphosphate kinase HY04AAS1_0971 910940 - 910299 - | HhH-GPD family protein TERM 672 910727 - 910755 + g 73 -2 -5.28315 | gap 1, overlap 910733 910741 CTATATCTACATGTT TTATA-GCTTTTA GGCT TAAAAGTTTATAA TTTTTTAGGTTTTCT TERM 673 910877 - 910887 + g 73 -6.8 -4.26076 | opp_overlap 910867 GATAATCGATATCTA CTGG CCA CCAG TTTTGATAGCCATAA HY04AAS1_0972 911200 - 910937 - | FlhB domain protein HY04AAS1_0973 912800 - 911202 - | hypothetical protein TERM 674 912325 - 912348 + g 77 -2.5 -5.52384 | opp_overlap 912347 GTTGAAAGGTCTTTG GCTTTTAAA AGAAAA TCTAAAAGC TTTTTTTCATAAAAA TERM 675 912367 - 912347 - G 70 -5.5 -4.49716 | opp_overlap 912325, overlap 912348 912366 AAAGAAAATCTAAAA GCTTTTTTT CAT AAAAAAGGC CGCTATTTTCAATAT HY04AAS1_0974 913722 - 912790 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 676 913583 - 913571 - G 70 -2.7 -5.18726 | TTCTCATAATAAAAA TTCTG CCC CAAAA CACTTGAAGCATGTT HY04AAS1_0975 914393 - 913719 - | hypothetical protein HY04AAS1_0976 915128 - 914394 - | short-chain dehydrogenase/reductase SDR TERM 677 915068 - 915050 - G 77 -2.5 -5.52384 | gap 1 TTGCTATCAAAAAAA GCTCAAAA CCGT TTTTG-GC AAACTCTTCTTCTGT TERM 678 915343 - 915331 - H 73 -9.1 -2.90725 | opp_overlap 915331 915330, overlap 915326 915321 CTAAAGCACACTAGA GCGCT ATC AGCGC ATTTAGGAGCTAAAG TERM 679 915331 - 915343 + H 72 -9.1 -2.73124 | opp_overlap 915326 915321 915331, overlap 915330 CTAAAGCACACTAGA GCGCT ATC AGCGC ATTTAGGAGCTAAAG TERM 680 917963 - 917951 - g 72 -4.1 -5.07011 | opp_overlap 917945 917952, overlap 917945 917952 TATATAAACCAAAAA CCAAC AAC GTTGA TTTTAGTATATTTGA HY04AAS1_0978 916534 - 917988 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 681 918096 - 918085 - g 71 -4.4 -4.72272 | GTTTTTTATGAAAAA GGAT ATAC ATCC TGAACTAAAGGAAAC HY04AAS1_0979 918077 - 918262 + | ribosomal protein L31 HY04AAS1_0980 918278 - 919348 + | peptide chain release factor 1 HY04AAS1_0981 919345 - 919437 + | hypothetical protein HY04AAS1_0982 919434 - 920087 + | protein of unknown function DUF202 TERM 682 920644 - 920623 - g 74 -3.7 -5.07652 | overlap 920625 920633 TTTGGCAAAAGAAAA CACTATCAC AGAG GTAATAGAG CCTTACACCTCAAGA HY04AAS1_0983 920084 - 921367 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 683 921430 - 921414 - f 73 -8.1 -3.56559 | overlap 921412 TCAACAAATATAATA GATGTAT GTT ATACATC AAATACGAGGACATA HY04AAS1_0984 921448 - 922185 + | RNA polymerase, sigma 28 subunit, FliA/WhiG TERM 684 923171 - 923184 + G 70 -5.3 -4.52873 | AAAGATACTTCTTCT TGCTT GTCA AAGCA TTATTTTTATAGACA HY04AAS1_0985 922182 - 923687 + | drug resistance transporter, EmrB/QacA subfamily HY04AAS1_0986 923684 - 923995 + | hypothetical protein TERM 685 924563 - 924536 - g 76 -2 -5.49809 | overlap 924537 924540 TAAACTTCAAAAAAA CCCACTTTACAT TTGA AGGTAAAGCAGA TATTTTCAACACAAC HY04AAS1_0987 923992 - 924732 + | hypothetical protein TERM 686 924731 - 924745 + G 74 -2.8 -5.36181 | opp_overlap 924733, overlap 924733 CTATAAACATAGAAT GATAGT ACT ACTAGC TTTGTTTTTTTCTTT HY04AAS1_0988 924729 - 925595 + | hypothetical protein HY04AAS1_0989 925644 - 926066 + | CoA-binding domain protein TERM 687 928395 - 928385 - g 72 -4 -4.9218 | GATTTACCAGAAAAA TTTG AAG CAAA AGACAGAGAAGAGTT HY04AAS1_0990 926063 - 928897 + | preprotein translocase, SecA subunit TERM 688 929434 - 929456 + G 70 -6.4 -4.11216 | TCTATGTATGGACCA GCTTTTAAAT ACT ATTTAGAGGC TTTTAAAGATAAAAA HY04AAS1_0991 928894 - 930270 + | Phosphomannomutase TERM 689 930556 - 930543 - g 70 -3.1 -4.89562 | opp_overlap 930544, overlap 930538 930544 GCAAAATTAAGAAAA CTACC AGAT GGTAA TTTTTTAGAAAAAGA TERM 690 930825 - 930813 - g 70 -5.5 -4.43392 | CTAAAACCAAAAGAA CCCAC CGT ATGGG ACAAAATTAAAAATG HY04AAS1_0992 930279 - 930866 + | protein of unknown function DUF88 HY04AAS1_0993 930930 - 931271 + | TPRXL protein-like TERM 691 931284 - 931304 + F 100 -9.7 -4.90917 | TAACAAAGGTTTAGT GCCCCCA AGTTTAA TGGGGGC TTTTTGGTTAACTTT TERM 692 931455 - 931429 - g 75 -8.8 -3.51633 | ATAGACGCCATAGAA GCTTTTATCGGC TTA ACCCATAAAAGC AGTAAAAAAATATAT HY04AAS1_0994 931336 - 931896 + | hypothetical protein TERM 693 932050 - 932035 - g 74 -4.7 -4.84311 | CCCCATACAAGAAAA CTCAC AAAAAA GTGAG TACATAAAAGAGATA HY04AAS1_0995 931928 - 932305 + | hypothetical protein HY04AAS1_0996 932437 - 932805 + | peptidase C39 bacteriocin processing TERM 694 933499 - 933480 - g 74 -7.9 -3.95674 | AAAAGCCCTAAACAA CATGCCA GAAAAA TGGCATG GAATAAAAGATATAG TERM 695 933835 - 933821 - g 75 -10 -2.76265 | overlap 933820 ACTTCAGAAACGAAG GCGTAG ACA CTACGC ACAACCCAGAGTTTA TERM 696 934364 - 934353 - g 71 -4.4 -4.77165 | overlap 934363 GTTTTTAGAACAAAA GCTT CAAA AAGC CACCGGTGACGAAGA HY04AAS1_0997 932830 - 934539 + | lysyl-tRNA synthetase TERM 697 935178 - 935168 - g 70 -5.4 -4.43208 | ATACTTGGAAAGAAA GGTT AGA AACC ATAAAAAACGTTCAA HY04AAS1_0998 934606 - 935601 + | biotin synthase HY04AAS1_0999 935592 - 936035 + | CMP/dCMP deaminase zinc-binding HY04AAS1_1000 936040 - 936441 + | protein of unknown function UPF0047 HY04AAS1_1001 936438 - 937754 + | membrane-associated zinc metalloprotease HY04AAS1_1002 937772 - 938710 + | ornithine carbamoyltransferase TERM 698 938887 - 938897 + GT 78 -5.4 -5.06414 | CGGCGGCTGTTGTCA TCCA AAT TGGA TTTTTCTTAAGGAAC TERM 699 939663 - 939639 - gT 80 -2.2 -5.61881 | gap 1, opp_overlap 939639 CTCCAAAAAGAAAAA GATGGCACTAT AAAT ATAG-GCAATC TCTTAGTACCCATTG HY04AAS1_1003 938682 - 940379 + | ABC transporter related HY04AAS1_1004 940872 - 940372 - | hypothetical protein HY04AAS1_1005 941873 - 940869 - | N-acetyl-gamma-glutamyl-phosphate reductase HY04AAS1_1006 942298 - 941858 - | ribosomal protein S9 HY04AAS1_1007 942745 - 942311 - | ribosomal protein L13 HY04AAS1_1008 943853 - 942822 - | alanine racemase HY04AAS1_1009 944155 - 943850 - | hypothetical protein HY04AAS1_1010 944933 - 944148 - | protein of unknown function DUF1009 HY04AAS1_1011 946270 - 944948 - | integral membrane sensor signal transduction histidine kinase TERM 700 945495 - 945485 - G 73 -5.4 -4.64861 | opp_overlap 945485 TCCTGTCAAAATAAA CTCA ATT TGAG CTTTTATATAGCTAA HY04AAS1_1012 948841 - 946277 - | translation initiation factor IF-2 HY04AAS1_1013 949164 - 948988 - | hypothetical protein TERM 701 949285 - 949272 - R 100 -9.5 -4.90778 | opp_overlap 949269 GTTATTTAAATAAAA GCCCC AAAC GGGGC TAAATATATTTTATT HY04AAS1_1014 950820 - 949312 - | ATP synthase F1, alpha subunit HY04AAS1_1015 951475 - 950927 - | ATP synthase F1, delta subunit TERM 702 951279 - 951292 + g 78 -3.9 -5.33785 | opp_overlap 951279 CCCTTTTGTATAAGA CTTTT TATA AAAAG TTTTTTCTGCTCATT HY04AAS1_1016 951954 - 951472 - | ATP synthase F0 subunit b HY04AAS1_1017 952386 - 951958 - | H+transporting two-sector ATPase B/B' subunit TERM 703 952619 - 952635 + G 76 -5.9 -4.65916 | opp_overlap 952619 AGAAACAAACAAACC GTATCTT TCA AAGATGC TTTTGTTAGGATAGA HY04AAS1_1018 952481 - 952957 + | SsrA-binding protein TERM 704 953659 - 953647 - g 74 -4.9 -4.82901 | TCGTTTTTAGAAAAA TTTGA TTT TCAAA AGGAGATATCAAGAC HY04AAS1_1019 952957 - 955041 + | ribonuclease R HY04AAS1_1020 955386 - 955129 - | hypothetical protein HY04AAS1_1021 956813 - 955401 - | ATP synthase F1, beta subunit HY04AAS1_1022 957735 - 956953 - | hypothetical protein HY04AAS1_1023 957940 - 959046 + | Phosphoribosylaminoimidazole carboxylase HY04AAS1_1024 959059 - 959832 + | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase TERM 705 960159 - 960145 - g 74 -2.8 -5.38398 | overlap 960146 AGAAAAAGAGAAAAA CCTAAG ACC CCTAGA AAGAATAGCCCTAAT HY04AAS1_1025 959855 - 960328 + | hypothetical protein HY04AAS1_1026 961273 - 960332 - | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit HY04AAS1_1027 963597 - 961270 - | DNA topoisomerase type IA central domain protein TERM 706 961763 - 961773 + g 70 -5.4 -4.40804 | TTGGATACATCGCTA TCTC TTA GAGA TTTTATAAGCTCCTC TERM 707 962493 - 962503 + g 74 -4 -5.09521 | ACTTTTTTAAAAGGT TCTT AAC AAGA TTTTTGGTTTCTTGA HY04AAS1_1028 964764 - 963604 - | hypothetical protein TERM 708 963852 - 963862 + g 70 -5.4 -4.47158 | opp_overlap 963850 TACCAGACAAAGACT CTCT TAC AGAG TTTCTTATCTCTTCT HY04AAS1_1029 965354 - 964761 - | hypothetical protein TERM 709 965068 - 965097 + g 70 -5.7 -4.39166 | ATTACTGTATCGTTT CCTATCTTCTGGG TGGC CCCATGAAATAGG TTTTGGTCTATGGGA HY04AAS1_1030 966684 - 965356 - | peptidase U62 modulator of DNA gyrase TERM 710 966207 - 966217 + g 73 -6.8 -4.1899 | TTTCTTCTATTTTTA CTCC GTA GGAG TTTTCCATAAAATAA HY04AAS1_1031 966817 - 967092 + | hypothetical protein TERM 711 967508 - 967484 - g 71 -7.1 -3.88766 | overlap 967488 AGGTCAGATAGCAAA CGAAGCTGCTC AGC AAGCAGCTACA CAAAATCAGCCAGTC TERM 712 967504 - 967488 - g 75 -8.7 -3.60473 | overlap 967484 CAGATAGCAAACGAA GCTGCTC AGC AAGCAGC TACACAAAATCAGCC HY04AAS1_1032 967239 - 967667 + | hypothetical protein TERM 713 967696 - 967682 - T 93 -11.4 -3.68265 | opp_overlap 967680 967677 AAATTTAACTTTAAA GCGGGT TTT ACCCGC TATGCCTTTAACAAC HY04AAS1_1033 968427 - 967714 - | Lytic transglycosylase catalytic TERM 714 968345 - 968358 + g 70 -3.1 -4.98672 | opp_overlap 968336 968345, overlap 968333 968340 AACGTATCTTCAAAA GAAGG CACA TCTTC TTTTATCTTTTTAAC HY04AAS1_1034 970078 - 968432 - | Tetratricopeptide TPR_2 repeat protein HY04AAS1_1035 970961 - 970080 - | UspA domain protein TERM 715 970730 - 970742 + g 76 -6.3 -4.57569 | overlap 970739 GATCTAAATACTCTG CTAAG GCG CTTAG TTTTTCCAAAGCTAA HY04AAS1_1036 971748 - 970939 - | Inositol-phosphate phosphatase HY04AAS1_1037 972312 - 971755 - | class II aldolase/adducin family protein TERM 716 972101 - 972114 + g 74 -4.5 -5.02201 | overlap 972104 GCTTTATGGACCGAT GCTTC AGAA GAGGC TTTTTCTGATATTTT TERM 717 972122 - 972132 + g 81 -4 -5.51402 | overlap 972104 GAAGAGGCTTTTTCT GATA TTT TATC TTTTTTTAGATCTAT HY04AAS1_1038 973151 - 972300 - | 4-hydroxybenzoate polyprenyltransferase HY04AAS1_1039 973605 - 973117 - | Shikimate kinase HY04AAS1_1040 973974 - 973636 - | hypothetical protein HY04AAS1_1041 974767 - 974042 - | protein of unknown function DUF81 TERM 718 974291 - 974275 - G 73 -6.7 -4.32131 | opp_overlap 974277 GCAAAACAAAGTAAA TAGATAT GAG ATATCTA TACTCATCAAACTCT HY04AAS1_1042 975405 - 974791 - | Sporulation domain protein HY04AAS1_1043 976477 - 975455 - | phenylalanyl-tRNA synthetase, alpha subunit HY04AAS1_1044 976817 - 976467 - | ribosomal protein L20 TERM 719 976604 - 976626 + g 85 -9.8 -3.87373 | ACTTGCTGTATGTCA TGCCGTTGGC TCT GCAAGCGGCA TTTATACGAGCTATC TERM 720 976873 - 976852 - R 88 -6.7 -5.2291 | overlap 976853 ATATTATAACAAAAA CTTCTTCTA TGTA TAGAAGAAA GTCCAAAATCCTTTA TERM 721 976872 - 976853 - R 75 -8 -3.72119 | overlap 976852 TATTATAACAAAAAC TTCTTCTA TGTA TAGAAGAA AGTCCAAAATCCTTT HY04AAS1_1045 977474 - 976833 - | Ribonuclease H TERM 722 977197 - 977207 + gr 81 -2.6 -5.69473 | opp_overlap 977197 GCAATACCTACACTA TATT TAA AATA TTTTTTTATCGTATC HY04AAS1_1046 977821 - 977417 - | ribosomal protein L19 HY04AAS1_1047 979032 - 977869 - | C4-dicarboxylate transporter/malic acid transport protein HY04AAS1_1048 979189 - 980049 + | hydroxymethylbutenyl pyrophosphate reductase TERM 723 980480 - 980494 + G 71 -4.2 -4.7254 | GGCTACAAGTTAATG GGTAGC GTA GTTGCC TTTTTCATAAGCGGT HY04AAS1_1049 980081 - 981013 + | cytochrome c-type biogenesis protein CcsB HY04AAS1_1050 981023 - 981856 + | nicotinate-nucleotide pyrophosphorylase HY04AAS1_1051 981959 - 982228 + | histone family protein DNA-binding protein TERM 724 982240 - 982258 + F 91 -11.7 -3.44146 | opp_overlap 982237 982234 TTAACTAAATTAGGG GCGGTGC TTTAT GCACCGC TTCCTTATAAAGGAC TERM 725 982308 - 982296 - g 70 -2.7 -5.19916 | AAAACAGTGAAAAAA GATTT AAC AAACC TTATAAAAAGCGAAG HY04AAS1_1052 982287 - 982739 + | hypothetical protein TERM 726 983279 - 983269 - gT 73 -3.2 -5.24129 | opp_overlap 983269 GTTTTTGATAAAAAA GAAG ATA CTCC TTCTTTTGAAAAACA HY04AAS1_1054 983870 - 983427 - | methylated-DNA/protein-cysteine methyltransferase HY04AAS1_1053 982726 - 983484 + | ribosomal RNA adenine methylase transferase TERM 727 983903 - 983886 - TR 87 -7.7 -4.79683 | gap 1 AATTTATAAAATAAA GCGGG-CT TTT AGACCCGC CAAAGGACAAAGCTA TERM 728 983960 - 983934 - TR 73 -8 -3.39497 | gap 1, overlap 983933 983935 TGAAAAGCATAAAAT CCCCCGTCCAC TTTATC GTGG-CGGGGA TTAAAAACTTAAAAT TERM 729 983959 - 983935 - TR 72 -9.3 -2.62614 | gap 1, overlap 983934 983933 GAAAAGCATAAAATC CCCCGTCCAC TTTATC GTGG-CGGGG ATTAAAAACTTAAAA HY04AAS1_1055 985366 - 983969 - | hypothetical protein HY04AAS1_1056 987262 - 985463 - | leucyl-tRNA synthetase TERM 730 986025 - 986043 + g 79 -3.2 -5.53991 | CTTGATACATTCCAA TCTTTTAT CTT GTAAGAGA TTTTTTTGGTGGCTA TERM 731 986252 - 986238 - G 73 -7.2 -4.08692 | opp_overlap 986227 TAAGCTTTGGCAAAA TCAAAG TCC CTTTGA TCGTGAGCGGGCACT TERM 732 986329 - 986345 + g 80 -8.7 -3.91144 | CGTATATGGGTATTT TCTTGCC GTT GGCAGGA TTTATGGCGTATAGG TERM 733 986571 - 986585 + g 75 -8.6 -3.53091 | AAATCTTTTAGCTTT GTTTCC AAT GGAAAC TTTACCAAAGCCCCT HY04AAS1_1057 987815 - 987264 - | DJ-1 family protein HY04AAS1_1058 988135 - 987815 - | hypothetical protein TERM 734 988170 - 988191 + r 70 -4.4 -4.87389 | TTCTTCGTGGGCTTC CGCCATCA CCATTT TTATGGCG TTTCTTTTTAGCATA HY04AAS1_1059 988379 - 988146 - | ferredoxin HY04AAS1_1060 988550 - 988954 + | hypothetical protein TERM 735 989597 - 989584 - g 70 -2.5 -5.16038 | ATACAAGAAACAAAA TAAAA AATA TTTTA GATAAAGCTGGGTTT TERM 736 990665 - 990677 + G 83 -6.3 -5.14965 | opp_overlap 990652, overlap 990652 AGGAGGTTTTGGAGC CTCTA TTT TAGAG TTTTTTAATGACAAT HY04AAS1_1061 988968 - 990851 + | deoxyxylulose-5-phosphate synthase HY04AAS1_1062 991454 - 990837 - | protein serine/threonine phosphatase HY04AAS1_1063 992254 - 991451 - | serine/threonine protein kinase HY04AAS1_1064 992997 - 992254 - | tRNA pseudouridine synthase A HY04AAS1_1065 994673 - 992994 - | alpha-glucan phosphorylase TERM 737 993209 - 993220 + g 76 -2.2 -5.50499 | overlap 993208 GTTCTAAAGCTATAT CTTC CCAA GAGG TTTTTTTACCTATGG TERM 738 994614 - 994628 + g 76 -10 -3.01912 | opp_overlap 994613 994612 CAATACTCCCAAACC CCCACT GTA AGTGGG TATATATGGCTCTAC HY04AAS1_1066 995464 - 994679 - | thiol:disulfide interchange protein HY04AAS1_1067 996453 - 995503 - | glycosyl transferase family 9 TERM 739 996419 - 996396 - G 85 -9.6 -4.10161 | CAGCATTTTGCAAAA GGGATGTAGC CAGC ACCACATCCC CTAAGTAAGCTGTTT HY04AAS1_1068 996892 - 996464 - | hypothetical protein TERM 740 996722 - 996734 + g 82 -7.7 -4.37211 | TAAGCTTTCCCTTAG GCTTG GAT CAAGC TTTCTTATAGCTTTC HY04AAS1_1069 998291 - 996894 - | glutamate synthase (NADPH), homotetrameric HY04AAS1_1070 999062 - 998295 - | 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase-like TERM 741 998742 - 998760 + g 70 -2.5 -5.1523 | opp_overlap 998754 TGCAAAACCCCAATT TATACTG ACAAA TAGTATA TTTTTATATTCTAGC HY04AAS1_1071 1000053 - 999055 - | Radical SAM domain protein TERM 742 999244 - 999259 + g 74 -4 -5.16472 | overlap 999245 CGCTGGTCTTGCACA TCCTAT TATT ATAGGG TTTTTTGGCATTTTT HY04AAS1_1072 1000411 - 1000064 - | protein of unknown function DUF1291 TERM 743 1000448 - 1000472 + r 77 -10 -2.66255 | opp_overlap 1000446 1000442, overlap 1000446 1000442 ATTTTTAAATTTAGT AGCCCTACTC CAAAA GAGTAGGGCA TAGATTATATTAACC HY04AAS1_1073 1000928 - 1000482 - | glycine cleavage H-protein HY04AAS1_1074 1001381 - 1000980 - | DsrE family protein HY04AAS1_1075 1001638 - 1001378 - | hypothetical protein HY04AAS1_1076 1002111 - 1001635 - | glycine cleavage H-protein HY04AAS1_1077 1003134 - 1002172 - | CoB--CoM heterodisulfide reductase TERM 744 1002675 - 1002693 + g 90 -9 -4.38843 | opp_overlap 1002683 CGTAGTAGTTGGCTA CCTTTAAA CCT TTTAAAGG TTTCTTGGTCTTTTC HY04AAS1_1078 1003908 - 1003147 - | heterodisulfide reductase subunit C HY04AAS1_1079 1004694 - 1003921 - | hypothetical protein HY04AAS1_1080 1005752 - 1004694 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase HY04AAS1_1081 1007089 - 1005773 - | protein of unknown function DUF224 cysteine-rich region domain protein HY04AAS1_1082 1007862 - 1007140 - | hypothetical protein HY04AAS1_1083 1008304 - 1007876 - | hypothetical protein HY04AAS1_1084 1008967 - 1008434 - | hypothetical protein HY04AAS1_1085 1009211 - 1008978 - | SirA family protein HY04AAS1_1086 1009864 - 1009316 - | protein of unknown function DUF507 HY04AAS1_1087 1010286 - 1009876 - | ATP synthase F1, epsilon subunit HY04AAS1_1088 1010362 - 1011558 + | DNA polymerase III, beta subunit HY04AAS1_1089 1011583 - 1012326 + | hypothetical protein HY04AAS1_1090 1012323 - 1013465 + | nuclease SbcCD, D subunit HY04AAS1_1091 1013533 - 1014381 + | band 7 protein HY04AAS1_1092 1014378 - 1014851 + | protein of unknown function DUF107 HY04AAS1_1093 1015120 - 1015833 + | dienelactone hydrolase TERM 745 1016127 - 1016117 - g 75 -5.4 -4.85195 | opp_overlap 1016117 AAAAGAACCTAAAAA CAAC GCC GTTG TCTTAAAGGAGTATC HY04AAS1_1094 1015830 - 1016171 + | protein of unknown function DUF488 HY04AAS1_1095 1016147 - 1016605 + | GCN5-related N-acetyltransferase HY04AAS1_1096 1016627 - 1017040 + | protein tyrosine phosphatase HY04AAS1_1097 1017021 - 1018070 + | glycosyl transferase group 1 TERM 746 1018120 - 1018108 - g 88 -4.9 -5.63504 | AACTTTATAAAAAAA CTATT TAA AATAG AGTCAAAGCAAGAAT HY04AAS1_1098 1018078 - 1019403 + | hypothetical protein HY04AAS1_1099 1019476 - 1019778 + | protein of unknown function DUF77 HY04AAS1_1100 1020120 - 1019779 - | 6-pyruvoyl tetrahydrobiopterin synthase HY04AAS1_1101 1020356 - 1020120 - | hypothetical protein HY04AAS1_1102 1021260 - 1020367 - | YicC domain protein HY04AAS1_1103 1022606 - 1021245 - | thiamine biosynthesis protein ThiC TERM 747 1022547 - 1022557 + g 73 -5.4 -4.56159 | opp_overlap 1022540, overlap 1022540 TATAATATCCTGCCT TGCA AGG TGCA TTTGTGTTTTATTGG HY04AAS1_1104 1023182 - 1022871 - | hypothetical protein HY04AAS1_1105 1023387 - 1023151 - | hypothetical protein HY04AAS1_1106 1024625 - 1023510 - | cell cycle protein TERM 748 1024161 - 1024144 - G 73 -7.1 -4.04415 | opp_overlap 1024144 1024143 1024146, overlap 1024153 GCAAAGAATACCAAA GACATTA CAGG TAATGTC ATTATCACCGCAGAA HY04AAS1_1107 1025322 - 1024612 - | phosphatidate cytidylyltransferase TERM 749 1024692 - 1024682 - G 76 -4.6 -5.10497 | AACCTATCTAAAAAA CCAC CGT GCGG ACCAAACACATTTGA TERM 750 1024834 - 1024822 - G 73 -3.5 -5.24291 | overlap 1024824 AAAACCAAAATAAAA TATAT TAA ATATA ATACATGACAAAGAA HY04AAS1_1108 1026137 - 1025319 - | Tetratricopeptide TPR_2 repeat protein TERM 751 1025464 - 1025454 - G 79 -8.2 -4.03995 | opp_overlap 1025454 1025453, overlap 1025452 CGCCGCAGAAAAATA CGCC GAA GGCG CTTTATCACAAGAGG TERM 752 1027013 - 1026987 - g 74 -3 -5.40072 | TTGGCGGTAAAAAAA TGTCAAAATCCC TTG GAAACTTTGTCA CTTTAAAAGAGATAT HY04AAS1_1109 1026188 - 1027654 + | cysteinyl-tRNA synthetase HY04AAS1_1110 1027654 - 1028454 + | prolipoprotein diacylglyceryl transferase TERM 753 1029493 - 1029472 - g 76 -4.4 -5.14563 | TCTTGGATGAAAAAA GAGATTCC CATGTT GGCATCTC AGGATTTTAGCACCG HY04AAS1_1111 1028476 - 1029699 + | peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 HY04AAS1_1112 1029696 - 1030115 + | hypothetical protein HY04AAS1_1113 1030117 - 1030890 + | hypothetical protein TERM 754 1031154 - 1031142 - g 70 -2.7 -5.21709 | TTTCATACGAAAAAA GCTTA CTC TAAAC CTTTAAGCCCAGCAA HY04AAS1_1114 1030926 - 1031681 + | TonB family protein HY04AAS1_1115 1031685 - 1032287 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 755 1032981 - 1032968 - g 79 -3.1 -5.4833 | TTAGTTAAGAAAAAA CCTAT AATA ACAGG GGCTGATTTAAAAAC HY04AAS1_1116 1032290 - 1033792 + | protein-export membrane protein SecD TERM 756 1034020 - 1033998 - g 71 -5 -4.57073 | opp_overlap 1034003, overlap 1034003 1034016 CAGTGCTTGCAAAAA TAAAATATCT ATG AGATATCCTA TAGTAGAAGCCCTTA TERM 757 1034015 - 1034003 - g 84 -4.9 -5.26119 | opp_overlap 1034003, overlap 1033998 CTTGCAAAAATAAAA TATCT ATG AGATA TCCTATAGTAGAAGC HY04AAS1_1117 1033789 - 1034625 + | peptidase A24A domain protein HY04AAS1_1118 1034616 - 1034894 + | twin-arginine translocation protein TatB TERM 758 1035327 - 1035349 + GF 77 -2.7 -5.50723 | gap 1 AATGCTTCTTGGTTT TGGCGCAGCT TTTG AGATGC-CCA TTTTTCTTTTCATGC HY04AAS1_1119 1034857 - 1035582 + | Sec-independent protein translocase, TatC subunit TERM 759 1036785 - 1036767 - g 73 -6 -4.52101 | opp_overlap 1036766, overlap 1036758 AAGAATCAAGCAAAA TTCTTGGT ACC ACCATGAA ATCTGTGGGCGAAGT HY04AAS1_1120 1035653 - 1037317 + | Carbamoyl-phosphate synthase L chain ATP-binding TERM 760 1037641 - 1037694 + F 82 -4.9 -5.46698 | gap 1, opp_overlap 1037650 1037661 TAAGCTGTTGATAGG TTGATGAGATACCTCAAAAACCTT GCCGGCA AAGGGTTTTAGGGTATTTCA-CAA TTTTTTCATTTTGGG TERM 761 1038475 - 1038492 + F 72 -9.1 -2.63992 | opp_overlap 1038475, overlap 1038474 1038469 1038465 1038477 TGAAACTAATATCAA CGCCACG CTCT CGTGGTG ATATATTTGGTTTTG TERM 762 1038823 - 1038836 + F 73 -4.5 -5.0065 | overlap 1038807 1038824 GGTATGGACACGTCA TGCCA TATG TGGCG TTTTGTTTGTACCTA TERM 763 1039094 - 1039108 + F 72 -7.2 -3.95073 | GAATGGTTGGATCAC CAAAAC AGA GTTTTG TTTGTACCTATAGGG TERM 764 1040095 - 1040085 - g 79 -3.2 -5.54907 | GCTATAAAAGAAAAA GAGT ATT ACCC TCCTATTATCAACAT HY04AAS1_1121 1039776 - 1040720 + | hypothetical protein HY04AAS1_1122 1040935 - 1040771 - | hypothetical protein TERM 765 1040854 - 1040864 + g 86 -6.8 -5.1101 | TATATCTTTCTAGTG TGCC AAC GGCA TTTTTTACATCGTGA HY04AAS1_1123 1041346 - 1042014 + | Sel1 domain protein repeat-containing protein HY04AAS1_1124 1042030 - 1042146 + | hypothetical protein HY04AAS1_1125 1042163 - 1042639 + | hypothetical protein TERM 766 1043218 - 1043193 - g 84 -4.7 -5.252 | TATTGGTATAAAAAA GCTGCTGAA CAAGGACT TGCAGCAGC AGAAGATAGTCTTGG TERM 767 1043326 - 1043301 - g 84 -4.7 -5.252 | TATTGGTATAAAAAA GCTGCTGAA CAAGGACT TGCAGCAGC AGAAGATAATCTTGG HY04AAS1_1126 1042686 - 1043717 + | Sel1 domain protein repeat-containing protein HY04AAS1_1127 1043830 - 1044417 + | hypothetical protein HY04AAS1_1128 1045677 - 1044691 - | hypothetical protein HY04AAS1_1129 1045937 - 1046218 + | ribosomal protein S20 HY04AAS1_1130 1046205 - 1046786 + | Tetratricopeptide TPR_2 repeat protein HY04AAS1_1131 1046783 - 1047484 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 768 1049363 - 1049376 + G 70 -3.1 -5.06414 | opp_overlap 1049349 GGACTTTTTATAAAA TCTTC TCCA GAGGA TTTTTCTTGCCAGAC HY04AAS1_1132 1047832 - 1049421 + | NADH dehydrogenase (quinone) TERM 769 1049630 - 1049615 - T 100 -11.8 -4.17023 | TTAATTATCTTAAAA GCCCCG AAAT CGGGGC TCGAAAATGAGAGAT HY04AAS1_1133 1049851 - 1049651 - | hypothetical protein TERM 770 1049691 - 1049707 + g 73 -2.2 -5.26316 | overlap 1049702 TGGGCTACTTTTTTG TGCCAC TTCTT GTGCCA TTTTTTGTGCACTAC HY04AAS1_1134 1051183 - 1049939 - | Adenylosuccinate synthase TERM 771 1050077 - 1050088 + g 73 -5.8 -4.44819 | overlap 1050063 1050074 TGCCGCCTTTGTGGT GGCT TTCC AGCC TTTTAATGTCTTATA TERM 772 1050155 - 1050175 + g 73 -5.5 -4.57353 | opp_overlap 1050155, overlap 1050150 CGGAAAATCTTCAAA GTTTTCATA AGC TATGCAAAC TTTTATCTCATCAAA TERM 773 1050203 - 1050193 - G 75 -5.4 -4.7373 | opp_overlap 1050193 1050191 TTATCTCATCAAAAA TGTC TAA GACA TCTAGTTTTGTAAGT TERM 774 1050586 - 1050596 + g 81 -2.6 -5.72616 | opp_overlap 1050586, overlap 1050579 GTATAATTTTAAAAG TATT TTT AATA TTTTTTTCTATAGGT HY04AAS1_1135 1051779 - 1051444 - | transcriptional regulator, HxlR family TERM 775 1051628 - 1051640 + g 70 -2.7 -5.1848 | TCTAACTCTCTTAGT TGTTT GGT AAGCA TTTTTTGAGTTACTT HY04AAS1_1136 1052825 - 1051776 - | histidinol-phosphate aminotransferase HY04AAS1_1137 1052871 - 1053320 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit HY04AAS1_1138 1053605 - 1053976 + | hypothetical protein HY04AAS1_1139 1054815 - 1054081 - | hypothetical protein HY04AAS1_1140 1055498 - 1054818 - | signal peptidase I TERM 776 1055647 - 1055662 + G 71 -4.7 -4.57837 | opp_overlap 1055647 ATATTTTTAGATCAA GCACT AAATAG AGTGC TTTTTAAAGACATCT TERM 777 1056086 - 1056100 + G 74 -5 -4.82901 | opp_overlap 1056086, overlap 1056088 TTGATGTGTTTAGAA TGCCAA GGG TTGGTA TTTTTGTCACCGGGG HY04AAS1_1141 1055566 - 1056783 + | molybdenum cofactor synthesis domain protein HY04AAS1_1142 1056806 - 1057012 + | thiamine biosynthesis protein ThiS TERM 778 1057603 - 1057616 + G 73 -5.3 -4.66833 | TATAGGAAGTGCTGC CGATA TTCC TATCG TTTTTGAGCTTGGAG HY04AAS1_1143 1057013 - 1057804 + | thiazole biosynthesis family protein HY04AAS1_1144 1057801 - 1059126 + | protoporphyrinogen oxidase HY04AAS1_1145 1059113 - 1059739 + | Methyltransferase type 11 TERM 779 1059765 - 1059781 + G 100 -12.3 -4.63218 | GATATATTTTATATC GCATGGG TCT CCCATGC TTTTATTGGAAAACA HY04AAS1_1146 1059748 - 1060470 + | Extradiol ring-cleavage dioxygenase class III protein subunit B HY04AAS1_1147 1060503 - 1060817 + | DNA polymerase beta domain protein region TERM 780 1061231 - 1061216 - g 78 -6.2 -4.84761 | opp_overlap 1061205 ACATGCTTATAAAAA GCTATT ATAA AATAGC TCCGGACGCTTACAG TERM 781 1061493 - 1061483 - g 79 -3.2 -5.48213 | TATCCAAAACAAAAA CCTA CTA CAGG CTAATAAAAAATCTT TERM 782 1061587 - 1061569 - g 79 -3.1 -5.45726 | overlap 1061572 1061575 GATATGCTAAAAAAA GATGAAG ACAAG CTTCGTC ATGCAAAAGCCCAAG HY04AAS1_1148 1060855 - 1061781 + | putative lipoprotein HY04AAS1_1149 1061774 - 1062106 + | iojap-like protein HY04AAS1_1150 1062103 - 1063206 + | hypothetical protein HY04AAS1_1151 1063203 - 1063880 + | two component transcriptional regulator, winged helix family TERM 783 1063959 - 1063947 - g 89 -6.3 -5.26907 | CAAGATAAAAGAAAA CCTTA AGA TAAGG ACCCATTCTGTAGCA TERM 784 1065555 - 1065541 - g 84 -5 -5.26119 | overlap 1065547 CTTTTAAAAAGAAAA TACGAA TCT CTCGTA GAAGAGATGGAAAAA HY04AAS1_1152 1063897 - 1066170 + | MutS2 family protein TERM 785 1066992 - 1066978 - g 71 -5 -4.58303 | TGAAAGAGTAGAAAA GCTTCT TAT AGAAAC AGCAAAAGAGGTTGT HY04AAS1_1153 1066172 - 1067230 + | MscS Mechanosensitive ion channel TERM 786 1067739 - 1067729 - g 70 -5.4 -4.52589 | opp_overlap 1067712 1067731 TGGTTTGATAGAAAA CATC TTG GATG GCTTTCAAGATTTAT HY04AAS1_1154 1067243 - 1068181 + | NAD-dependent epimerase/dehydratase HY04AAS1_1155 1068181 - 1069452 + | amine oxidase HY04AAS1_1156 1070801 - 1069449 - | hypothetical protein TERM 787 1070301 - 1070289 - G 71 -4.8 -4.56597 | overlap 1070273 GGCTTTGGTCAAAAA TGCC CCAGT GGCA AGCGCTGATCCAAAA HY04AAS1_1157 1072311 - 1070803 - | transcriptional regulator, NifA subfamily, Fis Family TERM 788 1071774 - 1071789 + g 74 -2.6 -5.34365 | gap 1, overlap 1071774 1071775 CCAAAAGTTGCCTTT G-CTCTT CCC AAGAGGC TTTTTCTTCTTGTAA TERM 789 1071972 - 1071983 + g 81 -3 -5.62288 | AAGCTTCATTTTTTA TCTT GTCT AAGA TTTTTGTTTTGTTCA HY04AAS1_1158 1073239 - 1072304 - | NAD-dependent glycerol-3-phosphate dehydrogenase domain protein TERM 790 1072494 - 1072504 + g 73 -3.2 -5.10526 | ATTTCTTCTAACGCT TCCT TTG GGGA TTTCTTTTTTCCTAT HY04AAS1_1159 1073339 - 1073971 + | NLP/P60 protein HY04AAS1_1160 1074010 - 1075062 + | hypothetical protein HY04AAS1_1161 1075163 - 1075633 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase HY04AAS1_1162 1075603 - 1076367 + | Patatin TERM 791 1076365 - 1076375 + F 72 -2.6 -5.35222 | opp_overlap 1076365 ATAGACAAAAATTTA TAAA GTT TTTA TTTTTTATGGATTTT HY04AAS1_1163 1076480 - 1077073 + | cytochrome c class I TERM 792 1077090 - 1077108 + F 100 -11 -5.74684 | opp_overlap 1077090 ACAAGTTTTATGACA CCTTCCCA ATA TGGGAGGG TTTTTGTTTTTCTTA TERM 793 1077108 - 1077090 - f 71 -8.8 -2.8001 | opp_overlap 1077090 ACAAGTTTTATGACA CCTTCCCA ATA TGGGAGGG TTTTTGTTTTTCTTA HY04AAS1_1164 1077140 - 1078534 + | protease Do HY04AAS1_1165 1078536 - 1079369 + | Diaminopimelate epimerase TERM 794 1079456 - 1079472 + G 81 -7.3 -4.66833 | CTTCTTGATCTAGAC TCGGTAG AGA TTACCGA TTTTTACGGTTCGAA HY04AAS1_1166 1079369 - 1079785 + | hypothetical protein TERM 795 1080824 - 1080814 - g 72 -4 -5.00136 | AAAGAAAATAGAAAA TGTA GAG TACA ATAAAGCTTCTAAAG TERM 796 1080840 - 1080830 - g 70 -5.4 -4.3767 | GTAGAGTACAATAAA GCTT CTA AAGC TCAAAGCTGTTGTGG HY04AAS1_1167 1079852 - 1081066 + | protein of unknown function DUF224 cysteine-rich region domain protein TERM 797 1081965 - 1081943 - g 73 -2 -5.27335 | CTTGGCAAAGAAAAA GGTATCAT AAAAGCA AAGATACC AGATATTATCTTCAC HY04AAS1_1168 1081151 - 1081993 + | protein of unknown function DUF191 HY04AAS1_1169 1082005 - 1082649 + | hypothetical protein HY04AAS1_1170 1082646 - 1083095 + | phosphatidylglycerophosphatase A HY04AAS1_1171 1083092 - 1085842 + | diguanylate cyclase with PAS/PAC sensor HY04AAS1_1172 1085860 - 1086144 + | hypothetical protein HY04AAS1_1173 1086147 - 1086704 + | Thiamine-phosphate diphosphorylase TERM 798 1088452 - 1088479 + G 71 -7.1 -3.90291 | opp_overlap 1088465 ATACCCCAACTCAAG CTGTACAGAGC AATACA GTTTTGTACAG TTTGGTTGACCAGGT HY04AAS1_1174 1086803 - 1088488 + | transposase TERM 799 1088609 - 1088593 - g 73 -6.5 -4.183 | opp_overlap 1088604 TCAATTCTTAAGAAA CTTTCCC TAG GGGACAG CTCTCAGCTCACCTA HY04AAS1_1175 1088500 - 1088706 + | hypothetical protein TERM 800 1088890 - 1088933 + F 71 -2 -5.43621 | gap 1, opp_overlap 1088899, overlap 1088899 1088927 ATTGATTTAGATTTA TTAGTA-GAAGTCTATAATGT GAT ATATTATTGACTTCGTATAAA TTTTTTATACTTTAT TERM 801 1088927 - 1088943 + F 71 -6.7 -4.08974 | overlap 1088890 TATATTATTGACTTC GTATAAA TTT TTTATAC TTTATATAGTGAGGT HY04AAS1_1176 1088966 - 1089175 + | protein of unknown function UPF0150 HY04AAS1_1178 1090235 - 1089450 - | PDZ/DHR/GLGF domain protein HY04AAS1_1179 1090660 - 1090232 - | hypothetical protein TERM 802 1090644 - 1090620 - G 74 -3 -5.37043 | opp_overlap 1090635 ATTCTATATAAAAAA TAAACATACC TTGGT GATATATTTA TCTTCCTAAAATCCA HY04AAS1_1180 1091610 - 1090642 - | hypothetical protein TERM 803 1091156 - 1091172 + g 83 -7.3 -4.72127 | opp_overlap 1091145, overlap 1091145 TATAGCATAGGTAAT GCTCTTA AGT TAGGAGC TTTTATATCTTCTAT HY04AAS1_1181 1091997 - 1091611 - | 7-cyano-7-deazaguanine reductase TERM 804 1093254 - 1093242 - g 84 -4.9 -5.2696 | opp_overlap 1093242 TCAAAAGCCAAAAAA CTTTT TAT AAAAG CTGGTTTTTATTACA HY04AAS1_1182 1092060 - 1093805 + | extracellular solute-binding protein family 5 HY04AAS1_1183 1093905 - 1095452 + | 2-isopropylmalate synthase HY04AAS1_1184 1096270 - 1095449 - | shikimate 5-dehydrogenase HY04AAS1_1185 1097346 - 1096267 - | phospho-N-acetylmuramoyl-pentapeptide-transferase HY04AAS1_1186 1097910 - 1097347 - | hypothetical protein TERM 805 1097588 - 1097601 + g 78 -3.8 -5.32608 | overlap 1097583 GTCCTCGCGTCGGTA CCCA CCGTTA TGGG TTTTTTGCCTTTTTT HY04AAS1_1187 1098497 - 1097907 - | protein of unknown function DUF205 HY04AAS1_1188 1099089 - 1098499 - | phospholipase D/Transphosphatidylase HY04AAS1_1189 1100339 - 1099086 - | phosphoribosylamine/glycine ligase HY04AAS1_1190 1100596 - 1100336 - | hypothetical protein HY04AAS1_1191 1101275 - 1100658 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase HY04AAS1_1192 1102000 - 1101335 - | type IV pilus assembly PilZ HY04AAS1_1193 1102686 - 1102018 - | type IV pilus assembly PilZ HY04AAS1_1194 1105485 - 1102687 - | excinuclease ABC, A subunit TERM 806 1103676 - 1103696 + g 70 -5.5 -4.45807 | overlap 1103673 CCCCTACTATGGTAA GAAAACC TTTTTCT GGTTTTC TTCTTTCTTTTGGTA TERM 807 1105001 - 1105021 + g 74 -2.6 -5.29742 | overlap 1105003 TCGCCTTTCTTTCCT CTTACTAT GGGAG ATAGTATG TTTATTTTTTTATCT TERM 808 1105299 - 1105279 - G 75 -5.5 -4.76312 | CATAACATTTAAAAA CTGTCTT GCATAAG AAGACAG AGATTCCACATACCT HY04AAS1_1195 1105993 - 1105463 - | protein of unknown function DUF88 TERM 809 1105926 - 1105908 - G 81 -9 -4.15006 | opp_overlap 1105922 ATATCTACTTTAAAA TCCAAAAA CTG TTTTTGGA CAAAGTAAAGGTTTG HY04AAS1_1196 1106580 - 1105990 - | GrpE protein HY04AAS1_1197 1107462 - 1106614 - | signal peptide peptidase SppA, 36K type TERM 810 1106759 - 1106772 + g 84 -3.1 -5.626 | gap 1 GGATGTTTTATATGG GCAAGC TCT GCT-GC TTTTTTTATAGCATC HY04AAS1_1198 1108223 - 1107456 - | Indole-3-glycerol-phosphate synthase HY04AAS1_1199 1108867 - 1108223 - | Carboxymethylenebutenolidase HY04AAS1_1200 1109879 - 1108836 - | uroporphyrinogen decarboxylase HY04AAS1_1201 1111099 - 1109879 - | putative signal transduction protein HY04AAS1_1202 1111667 - 1111116 - | acetolactate synthase, small subunit HY04AAS1_1203 1113432 - 1111678 - | acetolactate synthase, large subunit, biosynthetic type TERM 811 1112821 - 1112834 + g 76 -3.1 -5.33405 | TTTGGCTTCTAATAT GAGTT GAGC AGCTC TTTTTATTTGCTGAG HY04AAS1_1204 1115059 - 1113485 - | 2-isopropylmalate synthase/homocitrate synthase family protein TERM 812 1113805 - 1113833 + g 71 -4.6 -4.7254 | gap 1 CTCCTATTTTTATCC TCACG-GTAGCTT CTGA GAGCTCCTCGTGA TTTTTACTAAAAACT TERM 813 1114678 - 1114668 - G 72 -4 -5.00616 | opp_overlap 1114653 1114668 TCTTTTTTCAAAAAA GATA TAG TATC GTATATCATATTTAG HY04AAS1_1205 1116159 - 1115104 - | peptidase M24 HY04AAS1_1206 1117343 - 1116156 - | sigma-54 DNA-binding domain protein HY04AAS1_1207 1121734 - 1117325 - | Glutamate synthase (ferredoxin) TERM 814 1118549 - 1118572 + g 80 -10.4 -3.37259 | opp_overlap 1118549 1118548, overlap 1118547 ACCGTTTTCCATAAG GGTTTTTACG GTAT CGTAAAGACC TATTTCCCAATAGTT TERM 815 1120504 - 1120520 + g 73 -2.3 -5.35815 | CCAGATTTTCTTCTA TCCAT TTTTTGT ATGGA TTTTTCTTTGATATA TERM 816 1122263 - 1122253 - g 73 -6.8 -4.20367 | TCTTGCAACAAAGAA GGAG AAC CTCC TGCAAAATCCATAGA HY04AAS1_1208 1121863 - 1122441 + | Sua5/YciO/YrdC/YwlC family protein HY04AAS1_1209 1122825 - 1122448 - | hypothetical protein HY04AAS1_1210 1122921 - 1123214 + | protein of unknown function DUF156 HY04AAS1_1211 1123216 - 1123551 + | membrane protein containing heavy metal transport/detoxification domain TERM 817 1123638 - 1123625 - g 76 -2.3 -5.49809 | overlap 1123626 CAAACTGTAAAAAAA GCGCT AGAA AGCGT AGAAAATGTAAAGAA HY04AAS1_1212 1123565 - 1123801 + | Heavy metal transport/detoxification protein HY04AAS1_1213 1123794 - 1125188 + | mercuric reductase TERM 818 1125749 - 1125739 - g 72 -4 -5.04377 | TCAAAAGAAAATAAA TCAA GAC TTGA AATAGGAAGAGAAGA TERM 819 1126538 - 1126548 + G 78 -6.8 -4.61633 | TAGAACCCATGGTAT CCAC CCA GTGG TTTTTAAAAGTCTCT TERM 820 1127565 - 1127551 - g 73 -5.8 -4.4831 | overlap 1127548 ATGTATGAAAAAGAA GATTAT TGG ATAATC ACCGCCCTAAACCTT HY04AAS1_1214 1125451 - 1128423 + | valyl-tRNA synthetase TERM 821 1128621 - 1128644 + G 70 -6.8 -4.08216 | GTGGATGCAAAACCC GTATACGTTG GTAA CAAAGTATAC TTTTACACAGAATGC HY04AAS1_1215 1128420 - 1128926 + | Peptidase M23 HY04AAS1_1216 1128970 - 1129344 + | hypothetical protein HY04AAS1_1217 1129378 - 1129596 + | hypothetical protein HY04AAS1_1218 1129652 - 1130329 + | hypothetical protein HY04AAS1_1219 1130392 - 1131225 + | hypothetical protein HY04AAS1_1220 1131258 - 1131947 + | hypothetical protein HY04AAS1_1221 1131944 - 1133266 + | peptidase C14 caspase catalytic subunit p20 HY04AAS1_1222 1133275 - 1134129 + | hypothetical protein TERM 822 1134613 - 1134602 - g 76 -4.4 -5.13473 | opp_overlap 1134602 AGGAGATCTAAAAAA TGCT TCAA AGCA ATTTAAACAAGCCAT HY04AAS1_1223 1134144 - 1134965 + | Tetratricopeptide TPR_2 repeat protein HY04AAS1_1224 1135669 - 1135004 - | protein of unknown function UPF0005 TERM 823 1136398 - 1136412 + G 86 -4.2 -5.63504 | TGGTTTTAGTTATAG GCACTT TTT AAGGGC TTTTTTTATAAAATT TERM 824 1136748 - 1136738 - g 70 -6.8 -4.1413 | AATATATTTGGAAAA GGCA CGA TGCC AAAGTTAAAACAAAT HY04AAS1_1225 1135766 - 1136866 + | tRNA (guanine-N(2)-)-methyltransferase HY04AAS1_1226 1136857 - 1137870 + | polysaccharide deacetylase TERM 825 1138100 - 1138084 - g 76 -6.5 -4.51654 | overlap 1138087 AAAAGCCAAAAACAA CTACTGG ATA CCAGAAG AATACGACCTTGCGA HY04AAS1_1227 1137956 - 1138915 + | Ribonucleoside-diphosphate reductase HY04AAS1_1228 1138919 - 1139791 + | hypothetical protein TERM 826 1140054 - 1140067 + G 72 -3.8 -5.03994 | CAGATATTCATTTTG TGCC TTACAT GGCA TTTTTATCTATGGAA TERM 827 1140410 - 1140381 - g 73 -2.1 -5.252 | overlap 1140385 TATTTGCAGAAAAAA CCGATACACCTCT ACAT ATAGGTATAACAG AGGCAGGAATGGGTA HY04AAS1_1229 1139801 - 1140865 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase HY04AAS1_1230 1140868 - 1141077 + | RNA chaperone Hfq TERM 828 1141662 - 1141649 - g 73 -5.3 -4.70515 | opp_overlap 1141649, overlap 1141659 CAGACTTAAAACAAA CTACT TAAA AGTAG CTTTGGTAGGCTACA TERM 829 1142079 - 1142063 - g 77 -8.1 -3.90048 | opp_overlap 1142055 1142062, overlap 1142061 TGGTTTTGAAAAAGA GTTTTTC TTT GAAAAAC CTTACGTTTTGGTAT HY04AAS1_1231 1141074 - 1142186 + | GTP-binding proten HflX HY04AAS1_1232 1142179 - 1142994 + | hypothetical protein HY04AAS1_1233 1143002 - 1144027 + | aldo/keto reductase TERM 830 1144031 - 1144021 - g 78 -6.8 -4.5448 | opp_overlap 1144020 CATGTATAAAAAGAA TGCC TGA GGCA CATTTAAGCCTAAAA HY04AAS1_1234 1144020 - 1145099 + | type II secretion system protein TERM 831 1145857 - 1145841 - g 72 -9.5 -2.65442 | opp_overlap 1145839, overlap 1145847 AGAGGAGTCACACCA CCAATAC CTG GTATTGG ACTTACCTGGAATCA HY04AAS1_1235 1145145 - 1145954 + | prolipoprotein diacylglyceryl transferase HY04AAS1_1236 1145947 - 1146363 + | Mov34/MPN/PAD-1 family protein HY04AAS1_1237 1146353 - 1147210 + | porphobilinogen deaminase TERM 832 1147339 - 1147327 - g 74 -4.1 -5.15117 | overlap 1147328 TAAAAGCCTAAAAAA CCCTT CCA AAGGA AAGCCCATAGACCCA HY04AAS1_1238 1147226 - 1148269 + | hypothetical protein HY04AAS1_1239 1149625 - 1148261 - | hydrolase, TatD family HY04AAS1_1240 1151036 - 1149678 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase HY04AAS1_1241 1151420 - 1151076 - | hypothetical protein TERM 833 1151153 - 1151139 - G 84 -10 -3.6608 | opp_overlap 1151138 1151135 1151146 AGTAGTGTATTCAAA TGTCCC CTG GGGACA ATCGTATTCCCATTT HY04AAS1_1242 1152585 - 1151437 - | hypothetical protein HY04AAS1_1243 1153382 - 1152606 - | Polyprenyl synthetase HY04AAS1_1244 1154311 - 1153379 - | dihydroorotate dehydrogenase family protein HY04AAS1_1245 1154426 - 1154304 - | hypothetical protein HY04AAS1_1246 1156196 - 1154499 - | excinuclease ABC, C subunit HY04AAS1_1247 1157284 - 1156223 - | integral membrane sensor signal transduction histidine kinase TERM 834 1156370 - 1156360 - G 82 -6.8 -5.00616 | CTTCTCTGTAAAAAA GCTC AAA GAGC CTTGAAGTATCTTTT HY04AAS1_1248 1157945 - 1157277 - | two component transcriptional regulator, winged helix family TERM 835 1157315 - 1157325 + g 74 -4 -5.093 | CTGGCACGTTTCTTA TAAG GTC CTTA TTTTCTTCTTTTAAA HY04AAS1_1249 1158730 - 1157942 - | tryptophan synthase, alpha subunit TERM 836 1158669 - 1158689 + g 93 -3.3 -6.09196 | TATCCAGCCACCATG TAAGAAAGC AAT GCTATTTTA TTTTTTTGTTTTAAA HY04AAS1_1250 1159275 - 1158727 - | ribosome recycling factor HY04AAS1_1251 1159358 - 1159621 + | RNA chaperone Hfq HY04AAS1_1252 1159662 - 1160363 + | undecaprenyl diphosphate synthase HY04AAS1_1253 1160470 - 1161747 + | Phosphopyruvate hydratase HY04AAS1_1254 1161710 - 1162069 + | hypothetical protein HY04AAS1_1255 1162053 - 1162334 + | hypothetical protein TERM 837 1163013 - 1163001 - gf 78 -6.3 -4.72986 | CAGTTTGATGAAAAA GCTTT GAA AAAGC GTTCCAACGTCCAAA TERM 838 1164027 - 1164041 + GF 71 -8.6 -2.9329 | AAACACATGGATCAC GGGTTT AAA AAACCC TCTAGTCTGTTCCTT HY04AAS1_1256 1162356 - 1164548 + | phosphoribosylformylglycinamidine synthase II TERM 839 1164815 - 1164804 - gf 71 -3 -5.14985 | GCAAAGATACAAAAA TTAG TATA CTAA TGGGTATGCTCTCAG HY04AAS1_1257 1164518 - 1165000 + | lipoprotein signal peptidase TERM 840 1165050 - 1165072 + G 76 -3.5 -5.28315 | gap 1 TTAGAAGATGCCCTT TTAGC-CCAA GAAC TTGGAGCTGA TTTTTTAGGTTTTAT HY04AAS1_1258 1165002 - 1165580 + | Phosphoribosylanthranilate isomerase TERM 841 1165718 - 1165732 + G 70 -2.8 -5.07652 | GATATAGCAAAGTCT TACAAC ACA GATGTA TTTTATTTTGAGCCA TERM 842 1166084 - 1166069 - g 74 -4 -5.2291 | opp_overlap 1166076, overlap 1166057 ATATTAGAACAAAAA GTCCTA AGCT TAGAAC ATAAGCTATTACCCC HY04AAS1_1259 1165577 - 1166215 + | phosphoribosylglycinamide formyltransferase HY04AAS1_1260 1166271 - 1167344 + | 3-isopropylmalate dehydrogenase TERM 843 1168319 - 1168331 + G 72 -7.7 -3.67622 | overlap 1168316 GATAGCAAGTTTGGA GCTGT AAA ACAGC TTGCTTTTGAAAATG TERM 844 1168580 - 1168596 + G 78 -9.5 -3.64192 | opp_overlap 1168574 TATGAAAAGGGCGCT CCTTCTA AGT TAGAAGG TTTACCGGTATTTTT HY04AAS1_1261 1167353 - 1168873 + | hypothetical protein HY04AAS1_1262 1168873 - 1169259 + | Thioredoxin domain HY04AAS1_1263 1171642 - 1169246 - | DEAD/DEAH box helicase domain protein HY04AAS1_1264 1175136 - 1171639 - | hypothetical protein TERM 845 1172242 - 1172252 + g 72 -4 -4.9755 | ACCAAGATTTCCATT TCTT GCA AAGA TTTTTCCTTCTATAT TERM 846 1172913 - 1172900 - G 70 -3.1 -5.00138 | TAGCCAAAGTAAAAA CTTCC CTTA AGAAG ACCATTTATATGTGC TERM 847 1172961 - 1172951 - G 86 -5.4 -5.28942 | overlap 1172945 GATTTTAAATAAAAA GGTT TTA AACC AAGTATACCACTTAT TERM 848 1173138 - 1173148 + g 91 -6.8 -5.36441 | opp_overlap 1173138 CATACATAGTATATA CACC GTT GGTG TTTTTTATGTAAAAG TERM 849 1174607 - 1174593 - G 81 -5.7 -5.07275 | opp_overlap 1174571 1174593 GCACATATACAAAAA GCTCA TGTCT TGAGC TTTTGCTAAGATAAA TERM 850 1174916 - 1174906 - G 90 -4 -5.95539 | TTTTAAATAAAAAAA CAAA GGC TTTG AACTGTAAGAAAGCC TERM 851 1174955 - 1174969 + g 74 -4.4 -5.02777 | CCTAAGCCCAGCCTG TAAAAT ATA ATTTTA TTTATTTTTATATCT HY04AAS1_1265 1175461 - 1175147 - | small multidrug resistance protein TERM 852 1175485 - 1175467 - R 74 -8.8 -3.30505 | opp_overlap 1175467 1175468, overlap 1175466 1175468 AGTATATCATAAAAG CCCCCTCC AAA AGAAGGGG ATATATTTTTTATAT TERM 853 1175485 - 1175468 - R 71 -9.1 -2.5758 | opp_overlap 1175467 1175468, overlap 1175467 1175466 GTATATCATAAAAGC CCCCTCC AAAA GAAGGGG ATATATTTTTTATAT HY04AAS1_1266 1176484 - 1175495 - | CoA-binding domain protein HY04AAS1_1267 1177766 - 1176495 - | Succinate--CoA ligase (ADP-forming) HY04AAS1_1268 1177858 - 1178547 + | two component transcriptional regulator, winged helix family HY04AAS1_1269 1178540 - 1179049 + | 16S rRNA processing protein RimM TERM 854 1179739 - 1179761 + G 74 -7.7 -3.89305 | ACAGCGCATCGGCAC CTCTTCCAC CAGAA GTGGATGAG TATTTGTTTGTAGGT HY04AAS1_1270 1179072 - 1180520 + | UbiD family decarboxylase TERM 855 1181139 - 1181129 - g 70 -6.8 -4.02051 | TACCAATGTAAACAA CGGT TCT ACCG CCGCAAATATAATGG HY04AAS1_1271 1180581 - 1182398 + | flagellin domain protein TERM 856 1182411 - 1182430 + F 81 -9.2 -3.86897 | opp_overlap 1182405 1182412, overlap 1182412 TAATATCAATCACAT ACCTCCCC TTTT GGGGAGGG TTTATAAACAATAAA TERM 857 1182429 - 1182412 - f 100 -12.7 -3.03212 | opp_overlap 1182411 1182412, overlap 1182405 AATATCAATCACATA CCTCCCC TTTT GGGGAGG GTTTATAAACAATAA TERM 858 1182412 - 1182429 + F 100 -12.7 -2.91924 | opp_overlap 1182412 1182405, overlap 1182411 AATATCAATCACATA CCTCCCC TTTT GGGGAGG GTTTATAAACAATAA HY04AAS1_1272 1182524 - 1183654 + | hypothetical protein HY04AAS1_1273 1184521 - 1183631 - | riboflavin biosynthesis protein RibF HY04AAS1_1274 1185233 - 1184514 - | uridylate kinase TERM 859 1184836 - 1184826 - G 73 -2.4 -5.40474 | ATCTGTGGAAAAAAA CGGG TTT CCAG TGCCAGCGGCAAATA TERM 860 1185193 - 1185175 - G 90 -10.3 -4.3586 | TTATCTATACCAAAA CCTTGGC TTCCC GCCAAGG CTTCACCTGATATCT HY04AAS1_1275 1186051 - 1185230 - | translation elongation factor Ts TERM 861 1185841 - 1185855 + g 78 -8.6 -3.67622 | CAAGCTCAACCATTG CACCTT TTG AAGGTG TTGATTTTGCCACTA TERM 862 1185966 - 1185979 + g 73 -3.1 -5.07567 | gap 1, overlap 1185968 TCTATATCGCCGTTT GCCTCT TCA AG-GGC TTTTTTACAATCTAG HY04AAS1_1276 1186881 - 1186066 - | ribosomal protein S2 TERM 863 1186122 - 1186134 + g 73 -6.3 -4.53398 | overlap 1186119 CTGACATAGCCATAG CTCTT TCA AAGAG TTCTTTTTCCTCTTC TERM 864 1187227 - 1187240 + H 72 -2.5 -5.47821 | overlap 1187216 ATCCTTGAAAAATCC TTATT TATC AATAA TTTTTTTGGCTAAAT TERM 865 1187428 - 1187449 + H 74 -8.9 -3.07401 | CAACTTACCTCATTT TTGTATTAC ATTT GTAATACAA TATATATCATATTTT TERM 866 1187851 - 1187820 - g 75 -9.4 -3.27029 | opp_overlap 1187832, overlap 1187818 1187827 1187835 CTTGATGAAGTAACA GCTCAAAGTACAGC AGCA GCTGCTCTTGGAGC AAGCAACACTATAGA HY04AAS1_1277 1187523 - 1187996 + | hypothetical protein TERM 867 1188014 - 1188030 + F 86 -9.4 -4.04318 | ATTTTCTTATTTTTC TCCCCC TTCTT GGGGGA TTTATAATATATAGA TERM 868 1189361 - 1189373 + G 70 -2.7 -5.18371 | TTATTTTCATAAATA TAGAC ATA GTTTA TTTTATTTTATACAA TERM 869 1189872 - 1189884 + G 78 -6.3 -4.88407 | opp_overlap 1189872 1189870 1189865 AATATAAACCTAAGA CATCA TCT TGATG TTTTTAGTTCGATGC HY04AAS1_1278 1188045 - 1191164 + | hypothetical protein HY04AAS1_1279 1192711 - 1191215 - | transposase, IS605 OrfB family TERM 870 1192904 - 1192893 - g 81 -3 -5.63857 | overlap 1192883 AAAAAGCTAAAAAAA TTGT TAGC ACAA TAGAAATTTTAGTAA HY04AAS1_1280 1192826 - 1193167 + | hypothetical protein TERM 871 1193545 - 1193529 - g 76 -2.3 -5.46706 | overlap 1193533 ACTCTAAAAGAAAAA TCTATAA AAT TTTTAGA TGTAGGGACATCTGG HY04AAS1_1281 1193196 - 1194098 + | 6-phosphogluconate dehydrogenase, decarboxylating TERM 872 1194754 - 1194738 - g 78 -6.6 -4.60143 | AGATATGATACAAAA CCATCT TACCC AGATGG CAACCTTTATAGCTA HY04AAS1_1282 1194091 - 1195434 + | glucose-6-phosphate 1-dehydrogenase TERM 873 1195535 - 1195516 - g 86 -4.4 -5.61824 | TAAAAGCCAAAAAAA TAAAACTA AACA TAGCTTTA GCTGGTGGTAGCACA HY04AAS1_1283 1195419 - 1196066 + | 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase-like HY04AAS1_1284 1197206 - 1196079 - | Tetratricopeptide TPR_2 repeat protein TERM 874 1196589 - 1196609 + g 95 -6.9 -5.28561 | overlap 1196590 TATATTATTTTTCTC GCTATCTAT AAG ATAGATTGC TTTTTCTTCTATATT HY04AAS1_1285 1199072 - 1197234 - | putative signal transduction protein TERM 875 1197574 - 1197559 - G 74 -4 -5.15381 | opp_overlap 1197563, overlap 1197563 AATATATCTAAAAAA CTTACA TCTT CGTAAG AGGGTATTTCAAACG TERM 876 1199081 - 1199094 + r 100 -8.1 -5.41143 | TGTTCATTTTTAATG GGGCT TTGA AGCCC TTTTTTTACCAAGTG HY04AAS1_1286 1199474 - 1199100 - | hypothetical protein HY04AAS1_1287 1200195 - 1199557 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HY04AAS1_1288 1200543 - 1200196 - | hypothetical protein HY04AAS1_1289 1201028 - 1200540 - | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein TERM 877 1200714 - 1200733 + g 78 -3.6 -5.40474 | overlap 1200718 CACTATCGTAAGTTT TAATCCAA AATC TTGGTTTA TTTTTTTAAAAGCCT TERM 878 1200718 - 1200729 + g 76 -4.4 -5.20328 | overlap 1200714 ATCGTAAGTTTTAAT CCAA AATC TTGG TTTATTTTTTTAAAA HY04AAS1_1290 1201274 - 1201029 - | hypothetical protein HY04AAS1_1291 1201606 - 1201268 - | hypothetical protein HY04AAS1_1292 1201916 - 1201608 - | hypothetical protein HY04AAS1_1293 1202155 - 1201913 - | SirA family protein TERM 879 1202278 - 1202260 - H 70 -6.1 -4.17425 | opp_overlap 1202225 ATAATTATGTTAAAA TTTCCTT ATGAA AAGGAAA GATGTATTTAAGCAA HY04AAS1_1294 1202267 - 1203562 + | ATPase HY04AAS1_1295 1203570 - 1204274 + | dehydrogenase HY04AAS1_1296 1205043 - 1204264 - | glutamate racemase HY04AAS1_1297 1205180 - 1205052 - | hypothetical protein HY04AAS1_1298 1205463 - 1205203 - | transcriptional regulator, XRE family HY04AAS1_1299 1206661 - 1205474 - | HipA domain protein TERM 880 1205517 - 1205534 + g 88 -4.9 -5.70761 | overlap 1205518 TCTTTTATGATCCTG TTTCCAA TTTC TTGGAAG TTTTTATTTTGTTTT HY04AAS1_1300 1206837 - 1207193 + | hypothetical protein HY04AAS1_1301 1207241 - 1208017 + | hypothetical protein HY04AAS1_1302 1208526 - 1208029 - | NADH ubiquinone oxidoreductase 20 kDa subunit HY04AAS1_1303 1209972 - 1208536 - | NADH dehydrogenase (ubiquinone) 30 kDa subunit TERM 881 1209237 - 1209219 - G 72 -8.2 -3.62354 | overlap 1209220 CTTTTAAAGCAAACA CCTTTTGG GCT CCAAAAGA ATAACCTACGTCTTG TERM 882 1209236 - 1209220 - G 73 -9.5 -2.7693 | overlap 1209219 TTTTAAAGCAAACAC CTTTTGG GCT CCAAAAG AATAACCTACGTCTT HY04AAS1_1304 1211411 - 1209969 - | NADH dehydrogenase (quinone) TERM 883 1210080 - 1210097 + g 74 -2.7 -5.31275 | opp_overlap 1210082, overlap 1210082 TATCCCCATGGGTAT AAGCATA AACA TATGCTC TTTTTTCTGCTCAAA TERM 884 1211113 - 1211125 + g 73 -3.5 -5.07971 | opp_overlap 1211098 1211113, overlap 1211098 1211107 1211106 GTGTTTATCCAAAGA TAAAA CTC TTTTA TTTTTGATTCTTTTA HY04AAS1_1305 1212076 - 1211408 - | hydrogenase 4 membrane component (E) HY04AAS1_1306 1213003 - 1212086 - | respiratory-chain NADH dehydrogenase subunit 1 TERM 885 1212652 - 1212642 - G 70 -6.8 -4.17316 | overlap 1212628 AGCCCTCCAAAAGAA GACC CTT GGTC TAAACCGTAAAGCGC HY04AAS1_1307 1214897 - 1212996 - | NADH dehydrogenase (quinone) TERM 886 1214501 - 1214478 - G 74 -3.8 -5.16071 | overlap 1214479 AAGCACCAAGAAAAA CGAGAGGATA CTCA TAACCTCCCA AAACAATAAAAATGT HY04AAS1_1308 1218050 - 1215033 - | ribonucleoside-diphosphate reductase, alpha subunit HY04AAS1_1309 1218939 - 1218121 - | glycosyl transferase family 2 TERM 887 1218167 - 1218181 + g 74 -3.6 -5.08255 | overlap 1218179 CAAAGTCTTCTAATA TCTAAA GCT TTTGGA TTTTGTTTTAGAGCT HY04AAS1_1310 1219481 - 1218936 - | 20S proteasome A and B subunits TERM 888 1219412 - 1219425 + g 100 -8.1 -5.24531 | GCCCATCGCTTCCAA TGGCC GTTT GGCCA TTTTTTCTAACAGCT HY04AAS1_1311 1221436 - 1219472 - | transketolase TERM 889 1220814 - 1220828 + g 75 -8.6 -3.57615 | CTTACGGTAAAACCT GCGTTT TCA AAACGC TTTAGCACATCTTCA TERM 890 1221242 - 1221229 - G 73 -6.7 -4.22554 | GCAGCGAATAAAGAA GCATG GAAC CATGC CCATTGGAAAGTACA HY04AAS1_1312 1221614 - 1221820 + | hypothetical protein TERM 891 1221883 - 1221860 - f 74 -8.8 -3.36968 | gap 1, opp_overlap 1221859 1221855 TATTTAATTTTATAA TCCGC-GGGTC TTT GGCCCTGCGGA CATATTTGTTTTGGG TERM 892 1221962 - 1221950 - f 73 -9.1 -2.90725 | opp_overlap 1221950 1221949 CTAAAGCACACTAGA GCGGT AAA ACCGC ATTTCGGAGCTAAAG TERM 893 1221950 - 1221962 + F 72 -9.1 -2.73124 | opp_overlap 1221950, overlap 1221949 CTAAAGCACACTAGA GCGGT AAA ACCGC ATTTCGGAGCTAAAG HY04AAS1_1313 1222092 - 1222190 + | hypothetical protein HY04AAS1_1314 1222233 - 1222559 + | Rhodanese domain protein HY04AAS1_1315 1223469 - 1222546 - | Rubrerythrin TERM 894 1222823 - 1222833 + g 70 -3.2 -4.96762 | GGCAAAGAAAAGTTT GGTT TTT GACC TTTTTCTGATATCTC HY04AAS1_1316 1224317 - 1223481 - | Linocin_M18 bacteriocin protein TERM 895 1223855 - 1223865 + g 72 -4 -4.95876 | TACCGCCTTCCTCGT CAAA GTT TTTG TTTTTAATTATACTT HY04AAS1_1317 1225916 - 1224372 - | protein of unknown function DUF1703 TERM 896 1225668 - 1225679 + g 81 -4.4 -5.252 | TGCAAAGCTTATTTT TACC ACCG GGTA TTTTTTCTCCCAATC TERM 897 1226288 - 1226300 + GH 72 -4.1 -5.06414 | opp_overlap 1226283 1226296 CACAAAAGAATCCTA CGCTA AGA TAGTG TTTTTCTTCAAAAAA HY04AAS1_1318 1226061 - 1226507 + | hypothetical protein TERM 898 1226587 - 1226572 - gf 100 -7.6 -5.74122 | GATGATATAAAAAAA GAGCTT CACA AAGCTC ACGAGAGGATTCATT TERM 899 1228157 - 1228143 - gf 76 -7.2 -4.31835 | AAGTCTTATAAGAAA TCTTCA TTT TGAAGA AGGGATCAACGTAAC HY04AAS1_1319 1226461 - 1228293 + | diguanylate cyclase with PAS/PAC sensor TERM 900 1229414 - 1229431 + G 70 -5.7 -4.40963 | CCACACCTTTTATGT TCAAAAA AGAG TTTTTGA TTATTTTTGAGGAGT HY04AAS1_1320 1228303 - 1229607 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 901 1230700 - 1230679 - g 74 -3.7 -5.09173 | opp_overlap 1230686 GAAGAGTCTAAAAAA GAGCTTATC AGCG AAGAAGCTC ACTACGTTGATATAT HY04AAS1_1321 1229797 - 1231209 + | hypothetical protein TERM 902 1231636 - 1231598 - g 78 -5.3 -4.95155 | opp_overlap 1231608 1231610, overlap 1231600 1231610 GTTATACCAGAAAAA GCCAAGCTAAAAGCTGT AAGGG ACAGCTCTTTGTTTGCC ATGAATTTTATGATA HY04AAS1_1322 1231211 - 1231843 + | nitroreductase HY04AAS1_1323 1233184 - 1231859 - | diguanylate cyclase with PAS/PAC sensor TERM 903 1233231 - 1233257 + r 100 -13.1 -4.31379 | opp_overlap 1233230 1233229, overlap 1233235 AAGTGTAAAAAATTT TGAATGCCCCC GCAAA GGGGGCATTTA TTTTAATAGCTTAGT TERM 904 1233235 - 1233253 + r 100 -11.7 -4.7261 | opp_overlap 1233230 1233229, overlap 1233231 GTAAAAAATTTTGAA TGCCCCC GCAAA GGGGGCA TTTATTTTAATAGCT HY04AAS1_1324 1234329 - 1233268 - | TQO small subunit DoxD TERM 905 1234436 - 1234446 + H 72 -2.6 -5.41143 | overlap 1234416 1234445 TTTTTCATAAAGTTT TATA TTT TATA TTTTTTTCAAAAATA TERM 906 1234933 - 1234917 - g 74 -3 -5.26918 | ATAGGTTATAAAAAA CTTCCA AAGGA TAGAAG GTCAAAGGATGAGGT HY04AAS1_1325 1234479 - 1235015 + | hypothetical protein TERM 907 1236230 - 1236216 - g 86 -5.6 -5.36441 | opp_overlap 1236216 1236215, overlap 1236194 TTTCCAGATAAAAAA CCCACC ACC GTTGGG CTTATGCAAGTAAAG HY04AAS1_1326 1235019 - 1236545 + | Lytic transglycosylase catalytic HY04AAS1_1327 1238353 - 1236551 - | von Willebrand factor type A TERM 908 1236726 - 1236742 + g 70 -2.9 -5.19261 | overlap 1236729 TTTATTAAATTTACG TAGGAGC TTA GCTCTTC TTTTTTCATACCTTT TERM 909 1236729 - 1236739 + g 78 -6.8 -4.67552 | overlap 1236726 ATTAAATTTACGTAG GAGC TTA GCTC TTCTTTTTTCATACC HY04AAS1_1328 1238727 - 1238350 - | hypothetical protein HY04AAS1_1329 1240219 - 1238798 - | methyl-accepting chemotaxis sensory transducer TERM 910 1238973 - 1238983 + g 70 -3.2 -4.89339 | TCTATTTTCACAAAA GCTT CGT AGGC TTTTTCTCCATACTT TERM 911 1239122 - 1239133 + g 80 -2.2 -5.75599 | GTGCATATAGTTTGC GTGG TCTA CTAC TTTTTTTATGGTTTC TERM 912 1239927 - 1239940 + g 74 -8.1 -3.73323 | overlap 1239925 TTGGCTGTGTGCGTT GCCTC TAAC GAGGC TATTTCTATCTTTGA HY04AAS1_1330 1241371 - 1240241 - | geranylgeranyl reductase TERM 913 1240783 - 1240769 - G 74 -7.8 -3.9534 | overlap 1240770 ACCTATATTTACAAA CTCCCC TTG GGGGAA ATACCATCCGTAGCC TERM 914 1240782 - 1240770 - G 70 -9.1 -2.96722 | overlap 1240769 CCTATATTTACAAAC TCCCC TTG GGGGA AATACCATCCGTAGC HY04AAS1_1331 1241658 - 1241371 - | ribosome-binding factor A HY04AAS1_1332 1242974 - 1241655 - | two component, sigma54 specific, transcriptional regulator, Fis family HY04AAS1_1333 1243204 - 1242971 - | hypothetical protein HY04AAS1_1334 1244456 - 1243191 - | DNA polymerase III, subunits gamma and tau HY04AAS1_1335 1244516 - 1245367 + | 6-phosphogluconate dehydrogenase NAD-binding TERM 915 1246290 - 1246273 - g 74 -4.9 -4.77165 | opp_overlap 1246273 GGTCGCATAAGAAAA CCTCAAA TAGC TTTGAAG CTTTTGGCGGAAAAA HY04AAS1_1336 1245364 - 1247037 + | single-stranded-DNA-specific exonuclease RecJ HY04AAS1_1337 1247044 - 1247535 + | hypothetical protein TERM 916 1247574 - 1247561 - T 70 -3.9 -5.09426 | TTTAAGTTTAAAAAA TTTTG ATTT CAAAA GATTTTCAGCGTATT HY04AAS1_1338 1248532 - 1247537 - | Chorismate binding-like TERM 917 1248120 - 1248105 - G 76 -4.8 -5.00895 | overlap 1248099 CTTATTATATAAAAA TCTTTA TCTT TAAAGA AAAATCCAAAATCCA HY04AAS1_1339 1249233 - 1248508 - | aminotransferase class IV TERM 918 1250161 - 1250178 + H 75 -8.4 -3.74693 | TCACCGGCGGCTCCA CCCCTC CCGAAA GAGGGG TTTCCTAGCCTCCCA TERM 919 1251791 - 1251802 + H 76 -7.2 -4.2354 | AGGCTCTATTTCACT CCCC TTCC GGGG TTCTTTTCGCCTTTC TERM 920 1252657 - 1252676 + H 72 -9.2 -2.65808 | opp_overlap 1252648 1252645, overlap 1252654 AAAGGAGGTGATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 921 1253564 - 1253580 + H 72 -8.7 -3.07487 | overlap 1253563 GTTCGGAATGCCTTG CCGAAGT TGA GCTTCGG GTTTTGACAATCTGC HY04AAS1_1340 1254425 - 1255630 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 922 1256070 - 1256058 - g 78 -7.7 -4.26076 | opp_overlap 1256058, overlap 1256038 TTACCTTTATCAAAA GCCAA AGC TTGGC TTGAATGTCCTTAAG HY04AAS1_1341 1255627 - 1256580 + | hypothetical protein HY04AAS1_1342 1256564 - 1257940 + | apolipoprotein N-acyltransferase HY04AAS1_1343 1258032 - 1259075 + | Mrp protein TERM 923 1260068 - 1260080 + G 70 -9.1 -3.00215 | overlap 1260078 GTATAGAAACAGCTT CAGGC TCT GCCTG TGTGTCTACAGCTTT HY04AAS1_1344 1259077 - 1260297 + | aminotransferase class V HY04AAS1_1345 1260427 - 1261350 + | transcriptional regulator, LysR family HY04AAS1_1346 1261334 - 1262101 + | Haloacid dehalogenase domain protein hydrolase HY04AAS1_1347 1262572 - 1262096 - | heat shock protein DnaJ domain protein HY04AAS1_1348 1263062 - 1262559 - | CheW protein HY04AAS1_1349 1263864 - 1263118 - | ABC transporter related TERM 924 1263475 - 1263486 + g 73 -5.8 -4.46854 | opp_overlap 1263465 TAGTATCGACTCATC GAGG TTTA CCTC TTTTAGCTTTTCTAT HY04AAS1_1350 1264329 - 1263865 - | hypothetical protein HY04AAS1_1351 1264900 - 1264334 - | hypothetical protein HY04AAS1_1352 1265177 - 1264938 - | cell division topological specificity factor MinE TERM 925 1265131 - 1265143 + g 76 -3.4 -5.26119 | opp_overlap 1265120, overlap 1265123 GTAAGGCGCTGCTTG GCAA CATCT TTGC TTTTATTTTTAAAAA HY04AAS1_1353 1265974 - 1265180 - | septum site-determining protein MinD HY04AAS1_1354 1266567 - 1265974 - | septum site-determining protein MinC HY04AAS1_1355 1266590 - 1267252 + | Methyltransferase type 11 HY04AAS1_1356 1268005 - 1267265 - | Triose-phosphate isomerase TERM 926 1268159 - 1268146 - R 77 -8.1 -3.7732 | opp_overlap 1268153 TGTGCATATTAATAA GCCTC TTGC GAGGC CACTTTGCTTTCAAA TERM 927 1268251 - 1268238 - R 77 -8.1 -3.78034 | overlap 1268235 CATGCATATTAATAA GCCTC TTAA GAGGC CACTACTCTGTTTCT HY04AAS1_1357 1270948 - 1268243 - | diguanylate cyclase with PAS/PAC sensor TERM 928 1270067 - 1270093 + g 70 -3.1 -4.92828 | gap 1, overlap 1270069 1270071 TCCAGATTTTAATCT GTGCTTAAACTT AAAG AAGTTTA-GCTC TTTGTTTTTGGCTTT HY04AAS1_1358 1272182 - 1271016 - | ATPase TERM 929 1272242 - 1272224 - H 73 -4.6 -4.98758 | overlap 1272226 AAAAATCTATAAAAA TATACGAT GCC ATCGTAAA GAATTTGCAAAATAG TERM 930 1272240 - 1272226 - H 74 -7.2 -4.08693 | overlap 1272224 AAATCTATAAAAATA TACGAT GCC ATCGTA AAGAATTTGCAAAAT HY04AAS1_1359 1272330 - 1273739 + | peptidase U62 modulator of DNA gyrase HY04AAS1_1360 1273732 - 1274703 + | hypothetical protein TERM 931 1276631 - 1276645 + G 70 -8.6 -3.05597 | overlap 1276630 1276633 GACCTGGCATACTTT CAGAAG TGT CTTCTG CTTTTACAAAATCAA HY04AAS1_1361 1274707 - 1276818 + | (p)ppGpp synthetase I, SpoT/RelA TERM 932 1277181 - 1277169 - g 70 -5.5 -4.50583 | AAGACCACTACAAAA GAGCT TAT AGCCC ATGTGTTGCCTGGCA HY04AAS1_1362 1276815 - 1278155 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase HY04AAS1_1363 1278217 - 1278750 + | glycine cleavage H-protein HY04AAS1_1364 1279330 - 1278752 - | hypothetical protein HY04AAS1_1365 1280420 - 1279320 - | hypothetical protein TERM 933 1279872 - 1279887 + g 71 -4.8 -4.6645 | AATAGGGCCTCTTCC TATATC AAAA GATATA TTTTCTATCTCTATC HY04AAS1_1366 1281327 - 1280410 - | branched-chain amino acid aminotransferase TERM 934 1281396 - 1281416 + r 75 -9.7 -2.91681 | opp_overlap 1281382, overlap 1281386 1281398 ACATGCCCTTGCGGG CGGGGGATT TTG AGTCCCCTG TGTCTGCCATTCCAC TERM 935 1281398 - 1281414 + r 72 -8.7 -3.00994 | opp_overlap 1281382, overlap 1281386 1281396 ATGCCCTTGCGGGCG GGGGATT TTG AGTCCCC TGTGTCTGCCATTCC HY04AAS1_1367 1282116 - 1281487 - | HAD-superfamily hydrolase, subfamily IA, variant 1 HY04AAS1_1368 1282544 - 1282116 - | Protein of unknown function methylase putative TERM 936 1282310 - 1282321 + g 76 -5.8 -4.57073 | opp_overlap 1282309 ATACAATATCAAACT GCTC TTTT GAGC TTTTTAAAAACGATA TERM 937 1282842 - 1282823 - g 78 -3.6 -5.31275 | GGCCACTACAAAAAA GAAAGAAA AGGC CTTCCTTC TATAGCCCTTACTAC HY04AAS1_1369 1282607 - 1283200 + | phosphoheptose isomerase TERM 938 1284109 - 1284119 + G 73 -3.2 -5.13016 | CTATATTAGCTGTTT TGGT GGT GCCA TTTTTGCTTTTGGTT HY04AAS1_1370 1283178 - 1284407 + | hypothetical protein HY04AAS1_1371 1285551 - 1284412 - | acetylornithine and succinylornithine aminotransferase TERM 939 1285579 - 1285591 + r 82 -2.6 -5.92399 | CTTCTTTTTTGGCTT GGGC TTTTT GCTC TTTTTTGTTTTCTTC HY04AAS1_1372 1286614 - 1285556 - | recA protein TERM 940 1285684 - 1285695 + g 74 -4.4 -4.92777 | CTACATCTTTGTTTT CGTT TAGG AACG TTTTTACTTGCTCTT TERM 941 1286540 - 1286557 + g 75 -5.5 -4.82863 | opp_overlap 1286542, overlap 1286542 AGCCTTCATAGGCAT AACGGCA CCTT TGCCGTA TTTCTTTTCTACTTG TERM 942 1286555 - 1286542 - G 70 -8.1 -3.39327 | opp_overlap 1286540 1286542 CCTTCATAGGCATAA CGGCA CCTT TGCCG TATTTCTTTTCTACT TERM 943 1286542 - 1286555 + g 79 -8.1 -4.00842 | opp_overlap 1286542, overlap 1286540 CCTTCATAGGCATAA CGGCA CCTT TGCCG TATTTCTTTTCTACT HY04AAS1_1373 1286906 - 1286622 - | glutamyl-tRNA(Gln) amidotransferase, C subunit HY04AAS1_1374 1289196 - 1286914 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 944 1287862 - 1287872 + g 78 -4 -5.38951 | TTTTACATCTACACC TAAG CCC CTTA TTTTTTCTATAAGTT TERM 945 1287998 - 1288009 + g 70 -3 -5.16681 | CCCATACTGGCCATT TCTT TGTA AAGA TTTTCTTGTTTTTCA TERM 946 1288660 - 1288645 - G 70 -3.2 -5.02476 | opp_overlap 1288645 AGATTTTCCAAAAAA CGTATG CTCT CCTACG TTTATCACCCTTCCT HY04AAS1_1375 1289357 - 1289223 - | hypothetical protein HY04AAS1_1376 1290100 - 1289426 - | flagellar L-ring protein TERM 947 1289810 - 1289795 - G 79 -4.7 -5.10029 | opp_overlap 1289809 AGGAAGTCCAAAAAA CGATG ACACTG CATCG TTGAAGGTACTTGAA HY04AAS1_1377 1291434 - 1290109 - | Carbamoyl-phosphate synthase L chain ATP-binding TERM 948 1291046 - 1291059 + g 85 -3.7 -5.66989 | overlap 1291047 TCGCTTCCTGGCACT ACCGG TACT CCGGC TTTTTTTGCTATTTC TERM 949 1291047 - 1291058 + g 71 -7.2 -3.97753 | overlap 1291046 CGCTTCCTGGCACTA CCGG TACT CCGG CTTTTTTTGCTATTT TERM 950 1291412 - 1291423 + g 71 -4.4 -4.79826 | ATTTCGCCTCTGTTT GCTA TAAG TAGC TTTTTAATCATATAT HY04AAS1_1378 1291648 - 1291427 - | protein of unknown function DUF167 HY04AAS1_1379 1292421 - 1291648 - | citrate synthase TERM 951 1292015 - 1292031 + g 91 -5.1 -5.79595 | opp_overlap 1292008 TTATAGTATTTGTGT CCAAAAC CAG GTATTGG TTTTTTATTTTCAAG HY04AAS1_1380 1293246 - 1292431 - | UBA/THIF-type NAD/FAD binding protein HY04AAS1_1381 1294708 - 1293260 - | hypothetical protein TERM 952 1295816 - 1295798 - g 76 -3.2 -5.28778 | overlap 1295800 AGGATTTAGAAAAAA TAGTTTAT ATT ATAAACAA AAGCCTATGATAGGT HY04AAS1_1382 1294792 - 1295826 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 953 1296389 - 1296376 - g 73 -2.3 -5.28176 | TTCATCCAGAAAAAA GCCAA GAAG TAGGC CTTAAAATACTTTCT HY04AAS1_1383 1295823 - 1296431 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit TERM 954 1296583 - 1296564 - g 80 -5.8 -4.94811 | overlap 1296566 GGAAAAAGAAACAAA GCCTTTAA GCTT TTAAAAGC TAAAAAACCAAAAGA TERM 955 1296614 - 1296591 - g 74 -2.5 -5.2696 | gap 1, overlap 1296592 TTAAAAGCTAAAAAA CCAAAAGAAG GAGGG CCTCTTT-GG AGAATATACAAAGAC HY04AAS1_1384 1296444 - 1297118 + | hypothetical protein TERM 956 1297902 - 1297916 + G 81 -4.2 -5.26119 | opp_overlap 1297891 1297902 1297904, overlap 1297904 TAAACCATCAAGAGA TAGGTC AAA GACCTC TTTTGTTTTTGACAG TERM 957 1297904 - 1297914 + G 73 -6.8 -4.25502 | opp_overlap 1297902 1297904, overlap 1297902 AACCATCAAGAGATA GGTC AAA GACC TCTTTTGTTTTTGAC HY04AAS1_1385 1297115 - 1298074 + | glycosyl transferase family 2 HY04AAS1_1386 1298064 - 1298933 + | hypothetical protein HY04AAS1_1387 1299505 - 1298915 - | phosphoesterase PA-phosphatase related TERM 958 1299552 - 1299535 - R 85 -8.4 -4.40232 | ATAAAAACATATAAA GAGCCC GTGAAA GGGCTC TAAAGGTATTAAGAT HY04AAS1_1388 1302809 - 1299573 - | acriflavin resistance protein TERM 959 1300252 - 1300265 + g 79 -8.1 -4.10657 | opp_overlap 1300252 1300251 CATATGCTATAAAAT GGTGC ACCT GCACC TTTTGCCACATCTCC HY04AAS1_1389 1303935 - 1302811 - | efflux transporter, RND family, MFP subunit HY04AAS1_1390 1305328 - 1303937 - | outer membrane efflux protein HY04AAS1_1391 1306234 - 1305461 - | ATP-NAD/AcoX kinase HY04AAS1_1392 1307253 - 1306231 - | radical SAM enzyme, Cfr family HY04AAS1_1393 1307912 - 1307250 - | glutamine amidotransferase class-I HY04AAS1_1394 1308241 - 1307912 - | putative ferredoxin 2Fe-2S protein TERM 960 1308249 - 1308259 + r 80 -5.4 -5.20216 | TTAAACATATCGCCT CCTT CAA AAGG TTTTTTAATAATGTA HY04AAS1_1395 1309723 - 1308308 - | Carbohydrate-selective porin OprB TERM 961 1308819 - 1308802 - G 80 -9.9 -3.48395 | ACTCTGTGCATATAA CAGGGTA ATCA TACCCTG CCAAAGCTCCATTTG HY04AAS1_1396 1310790 - 1309768 - | high-affinity nickel-transporter TERM 962 1310558 - 1310541 - G 74 -7.7 -3.82592 | ACAATCCTATAACAA CGCTTGA ATGC CCAAGCG AGAAGAAAAAACCTA TERM 963 1310582 - 1310570 - G 79 -3.3 -5.56673 | opp_overlap 1310570 AGCGAGAAGAAAAAA CCTAC GCT GTTGG CATTTTTACCATCCT HY04AAS1_1397 1311276 - 1310857 - | putative transcriptional regulator, CopG family HY04AAS1_1398 1311291 - 1311878 + | transcriptional regulator, TetR family TERM 964 1312245 - 1312261 + G 100 -9.5 -4.84761 | TTAAAGAGTTTGGTG GGCTTTT AGG AAAAGCC TTTTTATCAAAATCT HY04AAS1_1399 1311875 - 1312759 + | NADH ubiquinone oxidoreductase 20 kDa subunit TERM 965 1313843 - 1313821 - g 76 -10 -2.99871 | overlap 1313818 1313833 TCTTATATTAAACCA CCTATAAAAG AGC CTTTTACAGG AAAAGGAGTAGGTAT HY04AAS1_1400 1312756 - 1314075 + | nickel-dependent hydrogenase large subunit TERM 966 1315057 - 1315072 + G 70 -5.4 -4.44974 | gap 1, opp_overlap 1315056, overlap 1315057 ATGTTCCATCAAGAT GG-GGCT CTC AGCCACC TTTTATAAACTTTAC TERM 967 1316011 - 1315982 - g 71 -8.7 -3.14393 | opp_overlap 1315982, overlap 1315980 AGGATATACCGAAGA TCCTTTTGAAGTT TTAG AACACCAAAAGGA TTTGCAAACGCTTTA HY04AAS1_1401 1314186 - 1316318 + | anaerobic ribonucleoside-triphosphate reductase HY04AAS1_1402 1316403 - 1317107 + | anaerobic ribonucleoside-triphosphate reductase activating protein HY04AAS1_1403 1319024 - 1317147 - | chaperone protein DnaK TERM 968 1318120 - 1318133 + g 81 -4.5 -5.38047 | ATCATCTCTTCTAAT CTCGC TCTG GTGAG TTTTTTCTGTAGGTG HY04AAS1_1404 1319199 - 1319297 + | hypothetical protein TERM 969 1320805 - 1320785 - g 74 -2.5 -5.30189 | opp_overlap 1320789, overlap 1320787 TAGAAGAGGAAAAAA GAGCTTTGC TTA GCAAATCTA TCACTTTACAATCTA TERM 970 1320915 - 1320904 - g 77 -3 -5.43414 | opp_overlap 1320904 1320909, overlap 1320909 AGCATATATAAAAAA GAAT TTCA ATTC TTTGATAATTATCAT TERM 971 1321041 - 1321021 - g 74 -4.8 -4.75472 | gap 1, overlap 1321022 CTCATATTAAGAAAA GCC-TTAGA AAAC TCTAAAGGC TGGGTGCTTATAACG HY04AAS1_1405 1319290 - 1322658 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) HY04AAS1_1406 1323122 - 1322655 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen HY04AAS1_1407 1324191 - 1323133 - | Radical SAM domain protein TERM 972 1323176 - 1323192 + g 78 -3.6 -5.38348 | TACGTATCTCTTTTT GCCGGT ATAAA ACCTGC TTTTTTAATATTTTT HY04AAS1_1408 1324301 - 1324642 + | hypothetical protein HY04AAS1_1409 1326324 - 1324639 - | NAD+ synthetase TERM 973 1324704 - 1324722 + g 84 -5.2 -5.26907 | overlap 1324707 CTCTTTCGTGAAGTT TAGGCCCT ATG GGGGCTTG TTTTCTTTTGTATTC TERM 974 1324707 - 1324719 + g 81 -6.9 -4.66746 | overlap 1324704 TTTCGTGAAGTTTAG GCCCT ATG GGGGC TTGTTTTCTTTTGTA HY04AAS1_1410 1327798 - 1326305 - | diguanylate cyclase TERM 975 1326954 - 1326989 + g 73 -3.5 -5.24291 | gap 1, opp_overlap 1326982, overlap 1326982 TCTTTTTCTAGTATT GGATCTTTTTCAACTT CGTCT AAGT-GAAGAAAATCC TTTTCTTTTAGTTTT TERM 976 1326982 - 1326994 + g 71 -4.9 -4.67038 | opp_overlap 1326982, overlap 1326954 CTTCGTCTAAGTGAA GAAAA TCC TTTTC TTTTAGTTTTAAAGC TERM 977 1327137 - 1327151 + g 78 -3.6 -5.26918 | overlap 1327139 CTATGTTCTTGTTTG TATATC CAA GATATG TTTTTTATAAGGTAT HY04AAS1_1411 1328327 - 1327785 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 978 1327839 - 1327859 + g 85 -6.9 -4.90381 | GTCTTGGTTTATAGT GTTGTATTC TCC GTATACAAC TTTTATTATATTACC TERM 979 1328306 - 1328316 + g 70 -2.6 -5.19251 | opp_overlap 1328306 GAACAAGTGCCAATA TATA TGC TATA TTTTTCTTCATATTA HY04AAS1_1412 1329568 - 1328324 - | cell division protein FtsA TERM 980 1328621 - 1328639 + g 70 -8.9 -3.07944 | overlap 1328620 ACCTGCATTTATATT CTCAAGC TTTAT GCTTGAG CTGTTTATTTTTTCT HY04AAS1_1413 1330928 - 1329645 - | Homoserine dehydrogenase TERM 981 1329839 - 1329855 + g 72 -8.1 -3.61178 | ATGCTATGCTTATGC CGTATTT TGC AAATACG TTTGCAATAGATGCC HY04AAS1_1414 1330982 - 1331836 + | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase HY04AAS1_1415 1331821 - 1332819 + | PhoH family protein HY04AAS1_1416 1332782 - 1333216 + | protein of unknown function UPF0054 HY04AAS1_1417 1334410 - 1333256 - | cation diffusion facilitator family transporter HY04AAS1_1418 1335383 - 1334445 - | conserved hypothetical radical SAM protein HY04AAS1_1419 1335712 - 1335434 - | Cystinosin/ERS1p repeat HY04AAS1_1420 1336614 - 1335709 - | ADP-heptose:LPS heptosyltransferase-like TERM 982 1336166 - 1336177 + g 78 -5.8 -4.87803 | ACTACATAGGTTTTA CCCT TTAG AGGG TTTTCTTTGAAAATC TERM 983 1336334 - 1336350 + g 77 -8.1 -3.92659 | TCTTTTTCTTTTTTA TACAAAG CTA CTTTGTA TTTGGCTTTTAAGAG HY04AAS1_1421 1337474 - 1336611 - | ROK family protein HY04AAS1_1422 1337552 - 1338037 + | hypothetical protein HY04AAS1_1423 1341575 - 1338042 - | hypothetical protein TERM 984 1339935 - 1339925 - G 73 -6.8 -4.2028 | opp_overlap 1339925 TATATACAGAAAGAA GCTG TCT CAGC TTTACAATCTCATGT TERM 985 1341541 - 1341552 + g 74 -3 -5.32699 | opp_overlap 1341541 TTGCTTTCAAACACA TCTT TTAC AAGA TTTTTTGCTCTTTCC HY04AAS1_1424 1341809 - 1341609 - | hypothetical protein TERM 986 1341813 - 1341799 - G 74 -4.2 -4.99645 | overlap 1341794 1341800 ACGTCATAAATAAAA TGCGAT TTC ATCGCT CTAAGTATAAAGATA HY04AAS1_1425 1344961 - 1341806 - | helicase domain protein HY04AAS1_1426 1345949 - 1344987 - | hydrogenase (NiFe) small subunit HydA HY04AAS1_1427 1346256 - 1345984 - | hypothetical protein TERM 987 1346265 - 1346279 + H 72 -7.2 -3.83257 | CATTCATTTTACACC TCCTTA TAT TAAGGA TATTGTTTTTGGCTT HY04AAS1_1428 1346352 - 1346579 + | FeoA family protein TERM 988 1347008 - 1346998 - g 79 -3.2 -5.59879 | TATAAATATAAAAAA GCTC TCA GAAC TAATAGGCGTTGATG TERM 989 1347629 - 1347645 + G 76 -5.8 -4.68209 | gap 1, overlap 1347632 1347632 TTTGTGATAAGCTTT GCACCCC TTGT GGGG-GC TTTGTTTGTTGGACT TERM 990 1348267 - 1348278 + G 80 -5.8 -5.00616 | GAGAGCCACCACATC GCTG GTAC CAGC TTTTTTGGCAAGAGA HY04AAS1_1429 1346603 - 1348696 + | ferrous iron transport protein B TERM 991 1348831 - 1348847 + F 74 -9.5 -2.62616 | opp_overlap 1348825 1348846, overlap 1348811 TCGAACCCACGACCT CGTGATT ACA AATCACG TGCTCTGCCGACTGA HY04AAS1_1430 1349091 - 1349366 + | hypothetical protein HY04AAS1_1431 1349370 - 1350062 + | Heme oxygenase HY04AAS1_1432 1350125 - 1351390 + | isocitrate/isopropylmalate dehydrogenase HY04AAS1_1433 1351406 - 1351822 + | OsmC family protein HY04AAS1_1434 1351827 - 1353245 + | acetyl-CoA carboxylase, biotin carboxylase HY04AAS1_1435 1353258 - 1355174 + | Oxaloacetate decarboxylase TERM 992 1355185 - 1355205 + F 100 -15.5 -4.56607 | CTTAATATTGTTCGG CGCGCCATA GCA TATGGCGCG TTTTATGATTACTAA HY04AAS1_1436 1355308 - 1357131 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein TERM 993 1357259 - 1357247 - g 82 -7.7 -4.4648 | AGCGCCATTACAAAA GCTCT TTC AGAGC TTAAAATAAGACCAG TERM 994 1357302 - 1357320 + G 71 -4.5 -4.85782 | opp_overlap 1357304, overlap 1357304 CTGTATCTGGTATAG GATGCTC CTCTA GAGCACC TTTGTTTTTGAAAAA HY04AAS1_1437 1357142 - 1358041 + | pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit TERM 995 1358132 - 1358106 - g 79 -10.9 -2.82208 | opp_overlap 1358107 AAATGAGGTATTAGA GGGCTTAAGCC TTGAG GGCTTAAGCCT TTGTTTTTCTACCTT TERM 996 1358107 - 1358131 + G 100 -15.1 -4.97405 | opp_overlap 1358106 AATGAGGTATTAGAG GGCTTAAGCCT TGA GGGCTTAAGCC TTTGTTTTTCTACCT HY04AAS1_1438 1358038 - 1358646 + | pentapeptide repeat protein HY04AAS1_1439 1358646 - 1359209 + | hypothetical protein HY04AAS1_1440 1359234 - 1360964 + | PHP domain protein TERM 997 1361505 - 1361488 - g 70 -5.7 -4.43877 | GAATTTGTAAACAAA TATGTAA AATC TTACATA AGCCTAAAAGATTTG TERM 998 1362574 - 1362560 - g 70 -8.6 -3.04715 | opp_overlap 1362559 1362560, overlap 1362559 CAGTGGTGTCAAAAG CCTCTT TAA AAGAGG ATTTGTTTAGAAGAG TERM 999 1362560 - 1362574 + G 71 -8.6 -3.24488 | opp_overlap 1362560 1362559, overlap 1362559 CAGTGGTGTCAAAAG CCTCTT TAA AAGAGG ATTTGTTTAGAAGAG TERM 1000 1363042 - 1363028 - g 76 -6.4 -4.52047 | TATTAGAGTACAAAA CCCCTT TTA AAGAGG CCTCTTGGATATTTT HY04AAS1_1441 1360945 - 1363410 + | Polynucleotide adenylyltransferase region HY04AAS1_1442 1363686 - 1364759 + | NADH:flavin oxidoreductase/NADH oxidase HY04AAS1_1443 1364891 - 1366021 + | diguanylate cyclase HY04AAS1_1444 1365993 - 1367921 + | hypothetical protein HY04AAS1_1445 1367921 - 1368352 + | hypothetical protein HY04AAS1_1446 1368388 - 1369689 + | adenylosuccinate lyase HY04AAS1_1447 1369686 - 1370267 + | CDP-alcohol phosphatidyltransferase TERM 1001 1370550 - 1370563 + T 83 -6.7 -4.78752 | GGTACTTCTTGATAT GTCCT TTGA AGGAC TTTTTCCCTTATAAT TERM 1002 1370913 - 1370933 + T 70 -8.3 -3.1096 | opp_overlap 1370912 1370902, overlap 1370912 AAAGCACGTCAACAT CTTCCAAAG ATT CTTTGGCAG CTTTTACCATGTATT TERM 1003 1371174 - 1371201 + T 87 -10 -3.88396 | opp_overlap 1371179, overlap 1371179 TCTTTTGATTATAGC AAAAAGCGGATA TCGC TATCCGCTTTTA TATTTTAGTTTAGGC TERM 1004 1371179 - 1371196 + T 100 -9.9 -4.93333 | opp_overlap 1371179, overlap 1371174 TGATTATAGCAAAAA GCGGATA TCGC TATCCGC TTTTATATTTTAGTT TERM 1005 1371196 - 1371179 - T 100 -9.9 -4.82667 | opp_overlap 1371179 1371174 TGATTATAGCAAAAA GCGGATA TCGC TATCCGC TTTTATATTTTAGTT HY04AAS1_1449 1371871 - 1371206 - | glutaredoxin-like domain protein HY04AAS1_1450 1372338 - 1371934 - | hemerythrin-like metal-binding protein HY04AAS1_1451 1372521 - 1373489 + | thioredoxin reductase HY04AAS1_1452 1373503 - 1373946 + | transcriptional regulator, TraR/DksA family TERM 1006 1374651 - 1374661 + G 75 -5.4 -4.83169 | opp_overlap 1374651 ACCAGTGTCAATGTA GAAG TTC CTTC TTTTTCTAAAAACCT TERM 1007 1374784 - 1374753 - g 80 -9 -3.93867 | AAAGAAGTAGAAGAA TCTTTTAAAAACTT TGTA AAGTTTTTAGAAGA AAACAAAGCCACCAT TERM 1008 1375197 - 1375213 + G 72 -8.1 -3.53811 | opp_overlap 1375197 TATCTTTCTGATATA TTTACAG TTT CTGTAAA TTTGGCAGAGCTCCC HY04AAS1_1453 1373949 - 1375382 + | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 1009 1375484 - 1375467 - g 84 -3.4 -5.60993 | overlap 1375468 GCTTTTATAAAAAAA CCAACG AAAAAA CGTTGA GCTTATTGCCGTTTT HY04AAS1_1454 1375376 - 1375921 + | hypothetical protein HY04AAS1_1455 1375921 - 1378068 + | UvrD/REP helicase HY04AAS1_1456 1378065 - 1379282 + | Ion transport 2 domain protein HY04AAS1_1457 1379295 - 1380263 + | NAD-dependent epimerase/dehydratase HY04AAS1_1458 1380680 - 1380264 - | protein of unknown function DUF461 TERM 1010 1380558 - 1380572 + g 81 -8.6 -4.13767 | ATTTTCTATCTTCAT GTAAGC GGC GCTTAC TTTTGAAGTAGGGGG TERM 1011 1380686 - 1380671 - G 71 -4.8 -4.64676 | opp_overlap 1380671 CCATTGCCAATAAAA GTTTTT TCAT AAAAAC CTCCTTAAAATAAAA HY04AAS1_1459 1380779 - 1381012 + | hypothetical protein HY04AAS1_1460 1381009 - 1382229 + | major facilitator superfamily MFS_1 TERM 1012 1383188 - 1383167 - g 70 -6.5 -4.17516 | overlap 1383168 TCCAAAGGATATAAA CGCCATGGC AAAA GCCATGGAA AAGGTACTAAATTTA HY04AAS1_1461 1382226 - 1383314 + | glycosyl transferase group 1 HY04AAS1_1462 1383444 - 1384235 + | hypothetical protein HY04AAS1_1463 1384243 - 1384974 + | hypothetical protein HY04AAS1_1464 1384971 - 1385861 + | Tetratricopeptide TPR_2 repeat protein TERM 1013 1386506 - 1386543 + G 78 -3.7 -5.41746 | gap 1, opp_overlap 1386510 1386512, overlap 1386507 1386508 CTTTGGGCCTTGGCA TATAT-ACTATGTATACT CTA AGTATACCTAGTAAAATA TTTTTTTACAGCGTT TERM 1014 1386538 - 1386510 - g 77 -10.5 -2.87132 | opp_overlap 1386508 1386507 1386506, overlap 1386512 GGGCCTTGGCATATA TACTATGTATACT CTA AGTATACCTAGTA AAATATTTTTTTACA TERM 1015 1386536 - 1386512 - g 70 -8.7 -2.98823 | opp_overlap 1386508 1386507 1386506, overlap 1386510 GCCTTGGCATATATA CTATGTATACT CTA AGTATACCTAG TAAAATATTTTTTTA HY04AAS1_1465 1385848 - 1386714 + | UbiA prenyltransferase HY04AAS1_1466 1387502 - 1386711 - | hypothetical protein TERM 1016 1387411 - 1387424 + g 77 -8.1 -3.9578 | opp_overlap 1387411 AGATTTTTTACATAA GAGGC CGGA GCCTC TTCTTTGAAGTATAT TERM 1017 1387424 - 1387411 - G 72 -8.1 -3.49102 | opp_overlap 1387411 AGATTTTTTACATAA GAGGC CGGA GCCTC TTCTTTGAAGTATAT HY04AAS1_1467 1389250 - 1387511 - | 5'-Nucleotidase domain protein TERM 1018 1387679 - 1387697 + g 88 -10.4 -3.84346 | overlap 1387677 GTAAAGCTCACCCCC GTATGTAG CAG CTACATAC TCTTTGTTTGGCTCT HY04AAS1_1468 1389590 - 1389261 - | Sulphur oxidation protein SoxZ TERM 1019 1389455 - 1389472 + g 75 -5.6 -4.80396 | overlap 1389469 TAGTTATATAGTTTG CTGGTA TAAGTT TACCAG TTTTTGGATCTTTTA HY04AAS1_1469 1389912 - 1389607 - | hypothetical protein HY04AAS1_1470 1390393 - 1389905 - | hypothetical protein TERM 1020 1390244 - 1390234 - G 75 -5.4 -4.72272 | opp_overlap 1390219 1390234 GGCTTTTACCAAAAA CCTT TTG AAGG GATTTCTCTATCTTC HY04AAS1_1471 1390800 - 1390387 - | thioredoxin TERM 1021 1390543 - 1390514 - G 75 -9.3 -3.13867 | opp_overlap 1390518 1390542, overlap 1390517 GGATTTATGAATATA GAAGTTGGGGTTC CAAA GACCCCCAATTTC CTACCAAGGGCTTTG TERM 1022 1390518 - 1390539 + g 78 -8.7 -3.72576 | opp_overlap 1390517 1390514 TTATGAATATAGAAG TTGGGGTTC CAAA GACCCCCAA TTTCCTACCAAGGGC TERM 1023 1390702 - 1390685 - G 71 -4.2 -4.84359 | opp_overlap 1390685 TTATCTTGATAAAAA TAAACC ATGAGG GGTTTA TCTTGGGCTTTTGCT HY04AAS1_1472 1391252 - 1390797 - | Domain of unknown function DUF1791 HY04AAS1_1473 1392789 - 1391305 - | hypothetical protein HY04AAS1_1474 1392963 - 1393523 + | hypothetical protein TERM 1024 1394124 - 1394111 - g 78 -3.9 -5.24989 | TGATATACTAAAAAA CTTTT TACA AAAAG CTAAATTGAGTTATA HY04AAS1_1475 1393560 - 1394150 + | glutamine amidotransferase of anthranilate synthase HY04AAS1_1476 1394171 - 1394353 + | hypothetical protein TERM 1025 1394601 - 1394591 - g 86 -6.8 -5.1244 | opp_overlap 1394591 CCATCAAGATAAAAA GCCA AAT TGGC TATGTGCCTCAAGAC HY04AAS1_1477 1394359 - 1395147 + | ABC transporter related TERM 1026 1395599 - 1395617 + G 72 -3.8 -5.01497 | TTGTTATCATGCTAT CTGGTATA TGT TTTGCCAG TTTTTCTATGCTAAT HY04AAS1_1478 1395148 - 1395912 + | ABC-2 type transporter HY04AAS1_1479 1396355 - 1396053 - | hypothetical protein HY04AAS1_1480 1396465 - 1396962 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 1027 1398186 - 1398173 - gf 72 -3.8 -5.06451 | opp_overlap 1398173 1398184 GAGGACCGCAAAAAA GCCA TAGCTT TGGC TCTTGATATAGCCCT HY04AAS1_1481 1396928 - 1398319 + | UDP-N-acetylmuramyl-tripeptide synthetase HY04AAS1_1482 1398346 - 1398981 + | endonuclease III HY04AAS1_1483 1398978 - 1399280 + | hypothetical protein HY04AAS1_1484 1399280 - 1401328 + | flagellar biosynthesis protein FlhA HY04AAS1_1485 1401318 - 1402439 + | GTP-binding signal recognition particle SRP54 G- domain HY04AAS1_1486 1402436 - 1403272 + | Cobyrinic acid ac-diamide synthase HY04AAS1_1487 1403269 - 1404006 + | phage SPO1 DNA polymerase-related protein HY04AAS1_1488 1404518 - 1404009 - | PEBP family protein TERM 1028 1404420 - 1404396 - G 83 -7.1 -4.72029 | opp_overlap 1404399, overlap 1404399 TCCAAGGCAAGAAAA TAACGGCGG AATATAA CCGCCGTTT TTAAAATCTTTACTA TERM 1029 1404399 - 1404417 + g 90 -8.8 -4.6856 | opp_overlap 1404396 1404399 AAGGCAAGAAAATAA CGGCGG AATATAA CCGCCG TTTTTAAAATCTTTA TERM 1030 1404417 - 1404399 - G 90 -8.8 -4.45817 | opp_overlap 1404399, overlap 1404396 AAGGCAAGAAAATAA CGGCGG AATATAA CCGCCG TTTTTAAAATCTTTA HY04AAS1_1489 1406963 - 1404522 - | ATPase AAA-2 domain protein TERM 1031 1404772 - 1404786 + g 88 -5 -5.4433 | opp_overlap 1404772, overlap 1404766 ATTTCTACACTAAGA CCTATA TCT TGTAGG TTTTTGTTTATCTCT TERM 1032 1406327 - 1406341 + g 71 -4.2 -4.77036 | overlap 1406318 TTCTCTGTGCTAAGC CCTCTA CTA TAGCGG TTTTTCCTACTCCAG TERM 1033 1406462 - 1406487 + g 70 -9.1 -3.07534 | gap 1, opp_overlap 1406468, overlap 1406464 CTAACTTACCTTCTG CAGCAAGAGACG TTA TGTCTCT-GCTG TGTCTATCTAATGTA HY04AAS1_1490 1408964 - 1407051 - | transglutaminase domain protein HY04AAS1_1491 1410660 - 1409053 - | ResB family protein HY04AAS1_1492 1410917 - 1410657 - | hypothetical protein HY04AAS1_1493 1411429 - 1410914 - | peptide deformylase HY04AAS1_1494 1412359 - 1411508 - | cytochrome c biogenesis protein transmembrane region TERM 1034 1411703 - 1411729 + g 78 -10.2 -3.30124 | opp_overlap 1411703 1411702 1411707, overlap 1411707 GTATATAAAAAGAAG GTAAGCACCTTT GTA AAGGGTGCTTTC TTGTGAAGCGTAAAA TERM 1035 1411707 - 1411725 + g 86 -9.6 -4.30987 | opp_overlap 1411707 1411703 1411702, overlap 1411703 ATAAAAAGAAGGTAA GCACCTTT GTA AAGGGTGC TTTCTTGTGAAGCGT TERM 1036 1412210 - 1412198 - G 84 -4.9 -5.38249 | ACCAAGCACAAAAAA TATAG ACG CTATA AGTATATCAATATCA HY04AAS1_1495 1413865 - 1412372 - | integral membrane protein MviN HY04AAS1_1496 1414491 - 1413862 - | Deoxyribonuclease V TERM 1037 1413996 - 1414012 + g 74 -3 -5.30199 | TATGCCCTATTGATA CGTAGA TTGGT TTTACG TTTTTCTTCGTTTTT TERM 1038 1414083 - 1414095 + g 73 -3.3 -5.08824 | TCTCTTTGTCTATAT CACCT ATA AGGAG TTTTTTAGCTACACC TERM 1039 1414451 - 1414467 + g 78 -3.7 -5.41143 | TTTATTATCTTTTTT GAGCA TTCTATT TGCTC TTTTTTTAAACGCTC HY04AAS1_1497 1415147 - 1414551 - | AMMECR1 domain protein TERM 1040 1415033 - 1415043 + g 72 -4 -5.01422 | opp_overlap 1415024, overlap 1415030 1415037 TGAAAACCCCTTGGG GTTT TGA AAAC TTTGTTTTTATATCC TERM 1041 1415617 - 1415595 - g 73 -5.6 -4.63542 | opp_overlap 1415595, overlap 1415597 CATAACTCCTAAAAA CATCTCTCAA TCT TTAAGAGAAG ATTTAAAAGAAGTTT HY04AAS1_1499 1415341 - 1416465 + | filamentation induced by cAMP protein Fic TERM 1042 1416471 - 1416496 + G 81 -2.6 -5.64006 | overlap 1416487 TGAGATATGATAATT TTTGAGTACG GTCTAA CGTATACAAA TTTTTTTGCTTACGT HY04AAS1_1500 1416462 - 1416647 + | hypothetical protein HY04AAS1_1501 1416899 - 1417084 + | hypothetical protein TERM 1043 1418226 - 1418204 - g 70 -3.4 -4.99435 | overlap 1418214 1418216 TTGAAGAACTAAAAA CCCTCAAAAA CGC CTTCTTAGGG GACAAAGAAAGTCTA TERM 1044 1418634 - 1418623 - g 73 -5.8 -4.4267 | GCCGAAAAGCTAAAA GGTG TTGC CACC ACAGAGCACGGCTGG HY04AAS1_1502 1417123 - 1419390 + | 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase TERM 1045 1420007 - 1419992 - g 81 -4 -5.48787 | ATAATAGACAAAAAA GATCCT TACA AAGATC AGATAGAAAAATCTG HY04AAS1_1503 1419401 - 1420339 + | Ferrochelatase HY04AAS1_1504 1420815 - 1420291 - | phosphoesterase PA-phosphatase related HY04AAS1_1505 1421726 - 1420818 - | methionyl-tRNA formyltransferase TERM 1046 1421046 - 1421036 - G 72 -8.2 -3.54424 | opp_overlap 1421036 TGCGATCGCCTGAAA CGCC GTA GGCG TTTGGATATACACCT TERM 1047 1421036 - 1421046 + g 74 -8.2 -3.7108 | opp_overlap 1421036 TGCGATCGCCTGAAA CGCC GTA GGCG TTTGGATATACACCT TERM 1048 1421521 - 1421536 + g 74 -2.6 -5.28176 | opp_overlap 1421517 1421516, overlap 1421517 ATATTTAAAAGCTCT TCTTTT AAAA AAGAGA TTTTTTCTGGCTGAG HY04AAS1_1506 1422286 - 1421723 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HY04AAS1_1507 1422912 - 1422283 - | cytidylate kinase TERM 1049 1422334 - 1422364 + g 80 -10.6 -3.43364 | overlap 1422332 TATTACCTCTTCTTT TGTCATACAAGTGG TAT CTATTTGTATGGCA TCTTCTGCTTTTCTA TERM 1050 1422965 - 1422950 - R 89 -7.5 -5.07486 | opp_overlap 1422950 TATGTTTAATAAAAA GGCCC TAAGCC GGGCC TTGCATGTTTATTTT HY04AAS1_1508 1423195 - 1422974 - | hypothetical protein HY04AAS1_1509 1423394 - 1423206 - | zinc finger CDGSH-type domain protein HY04AAS1_1510 1424712 - 1423510 - | Ornithine decarboxylase HY04AAS1_1511 1425936 - 1424743 - | arsenite-activated ATPase ArsA TERM 1051 1425985 - 1425967 - R 70 -4.6 -4.86133 | opp_overlap 1425971, overlap 1425971 TATAGACATTAAAAA TCAACCTT TTA AAGGTTTA TCTCAGTAAAATCCC HY04AAS1_1512 1426640 - 1425975 - | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase HY04AAS1_1513 1427188 - 1426637 - | Acireductone dioxygenase ARD TERM 1052 1426759 - 1426749 - G 70 -3.2 -5.02476 | opp_overlap 1426737 ATAGCTTTGAAAAAA GGCT TTG AACC CATATCAAACCAATG HY04AAS1_1514 1427796 - 1427185 - | methylthioribulose-1-phosphate dehydratase HY04AAS1_1515 1427905 - 1428144 + | putative bifunctional endo-1,4-beta-xylanase xylA precursor TERM 1053 1428269 - 1428258 - g 70 -3 -5.23765 | opp_overlap 1428258 TAAAGAAGATAAAAA TCTT TGGC AAGA TGTCTGGAATGAGAT HY04AAS1_1516 1428151 - 1429386 + | UDP-N-acetylmuramoylalanine/D-glutamate ligase HY04AAS1_1517 1430571 - 1429390 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1054 1431145 - 1431155 + G 70 -3.2 -5.0133 | TACCTTGGCATATTT GCAG GAC TTGC TTTTTTAGCAAAGTA HY04AAS1_1518 1430608 - 1432128 + | glycosyl transferase family 39 HY04AAS1_1519 1434778 - 1432130 - | surface antigen (D15) TERM 1055 1433719 - 1433694 - G 70 -5.5 -4.36914 | gap 1, opp_overlap 1433692 1433694 TGCTTTTTTATAAAA TCTTCCAA-AGC TTT GCAGTTGGAAGA TATATTGTTTAGTTT TERM 1056 1434670 - 1434686 + g 74 -4.5 -5.00616 | overlap 1434684 GATTCTCTTTTGTGA TAACTTT TGA GAAGTTA TTTTTTGCCAAAGGA TERM 1057 1434812 - 1434799 - R 74 -3.9 -5.24416 | opp_overlap 1434799 TAATTATAATAAAAA TTTAG GATT CTAAA TATTTTAAAACGTTT TERM 1058 1434835 - 1434813 - R 75 -8 -3.62275 | opp_overlap 1434815 ATTTAGGATTCTAAA TATTTTAAAA CGT TTTTAAAATA ATCTGGCATATCTAT HY04AAS1_1520 1435726 - 1434800 - | pseudouridine synthase, RluA family TERM 1059 1435266 - 1435280 + gr 73 -2.1 -5.27779 | opp_overlap 1435250, overlap 1435267 ATCAAAGATAGCTTT TGATG GCTGA CATCG TTTTTTGCTATTACC HY04AAS1_1521 1435868 - 1435701 - | hypothetical protein HY04AAS1_1522 1436116 - 1435865 - | hypothetical protein TERM 1060 1436132 - 1436148 + r 82 -6.5 -5.07107 | GCTTTTGTTTGATTT GCCACAG ATT CTATGGC TTTTTTAAGGGTTTC HY04AAS1_1523 1436856 - 1436113 - | phosphoglycerate mutase 1 family HY04AAS1_1524 1437445 - 1436876 - | SirA family protein TERM 1061 1437010 - 1437000 - G 72 -8.2 -3.50906 | opp_overlap 1436999 1436998 1437000, overlap 1436998 AAGCCAAATACAATA CCGC AAT GCGG ATATATCTCTTTTGG HY04AAS1_1525 1438629 - 1437508 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase HY04AAS1_1526 1440324 - 1438651 - | transposase, IS605 OrfB family TERM 1062 1438959 - 1438916 - G 70 -5.5 -4.46854 | gap 2, opp_overlap 1438928, overlap 1438928 GTATCCAAGAATAAA CCTCTCTTAAC--ACGCTTTC CTTT GAAAGCATTAGTCAAGTGAGG ACTATCTAGAGCGTT TERM 1063 1439219 - 1439233 + g 71 -5 -4.70659 | overlap 1439220 CACTCTCCATTGCTC TTTAGC TGT GCTAAG TTTTTAGATATAAAA HY04AAS1_1527 1441903 - 1440455 - | type II secretion system protein E TERM 1064 1440871 - 1440884 + g 73 -6.7 -4.2349 | opp_overlap 1440864 CAAAAAGTCTCGTAA CGCTT GATA AAGCG TTTTGGGTATGAAGG HY04AAS1_1528 1442195 - 1441905 - | ferredoxin HY04AAS1_1529 1443055 - 1442210 - | peptidase M48 Ste24p TERM 1065 1442810 - 1442823 + g 77 -8.1 -3.83816 | opp_overlap 1442802, overlap 1442802 GTATAACCTTGGCAT GGGCA AGTT TGCCC TTTGGGTTAGTTTCT TERM 1066 1442986 - 1442968 - G 73 -7.4 -4.17523 | overlap 1442971 AAATAAGTGCGAAAA GAAGGCCA ATT TGACCTCC AATCATATAACCTAC HY04AAS1_1530 1444788 - 1443052 - | RNA polymerase, sigma 70 subunit, RpoD family TERM 1067 1444460 - 1444476 + g 79 -10.9 -3.08371 | TGTTCTATTTCATCT GCTCTTC CAA GAAGAGC TATCTTGCCCATCTC HY04AAS1_1531 1446439 - 1444832 - | DNA primase TERM 1068 1446502 - 1446513 + r 80 -5.8 -4.96848 | AAGTATCATCTATCA GCGT TTCT ACGC TTTTTCTCTCAAAGA HY04AAS1_1532 1449253 - 1446485 - | ATPase associated with various cellular activities AAA_5 TERM 1069 1448290 - 1448315 + g 75 -7.1 -4.26188 | gap 1, opp_overlap 1448283 1448294, overlap 1448283 1448294 CAAGCAAATTTGTAT CAAACTTT-CTA AGG TAGTAAAGTTTG TTTTCCCTATCTACA HY04AAS1_1533 1449410 - 1449961 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 1070 1450097 - 1450107 + G 73 -6.8 -4.3467 | GCTTTTGGCGTATTG GCGA TAA TCGC TTTTACTGTGCAAAT TERM 1071 1450703 - 1450719 + G 71 -5.1 -4.61648 | overlap 1450700 AAAGAAGGTGCTGTA GCAATGT TCT ACCTTGC TTTGTTCTTCTTCTT HY04AAS1_1534 1449980 - 1451182 + | Cytochrome b/b6 domain HY04AAS1_1535 1451179 - 1451889 + | ubiquinol-cytochrome c reductase cytochrome c1 subunit TERM 1072 1451899 - 1451916 + T 100 -12.7 -4.08164 | opp_overlap 1451896 1451899 CACTGATAACAATTA CCCTCCC TTTT GGGAGGG TTTATATAAAATTTT TERM 1073 1451916 - 1451899 - T 100 -12.7 -2.99259 | opp_overlap 1451899, overlap 1451896 CACTGATAACAATTA CCCTCCC TTTT GGGAGGG TTTATATAAAATTTT HY04AAS1_1536 1454566 - 1451996 - | alanyl-tRNA synthetase TERM 1074 1452410 - 1452422 + g 76 -6.3 -4.56133 | TTTTAGAGCTATTAC CCTTT CTA AAAGG TTTTGCTTGTTGGCA TERM 1075 1453015 - 1453029 + g 79 -7.1 -4.40894 | CTATATGAGCTATTA CCCCA TCCGT TGGGG TTTTGGTGTCGTTTA TERM 1076 1453096 - 1453119 + g 76 -6.1 -4.64676 | TGTCTCCTATCTGAC CGCCTTTTT CTGGAT AAAAAGGTG TTTTGTTAAGGATGA HY04AAS1_1537 1455425 - 1454598 - | dTDP-4-dehydrorhamnose reductase HY04AAS1_1538 1456432 - 1455422 - | dTDP-glucose 4,6-dehydratase HY04AAS1_1539 1457008 - 1456436 - | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 1077 1456666 - 1456646 - G 78 -6.7 -4.64657 | opp_overlap 1456651, overlap 1456636 TGAAAGGGTCAAAAA CCCATGGGC AAA GCCCTTTGG TATAAAAAGCATCAG TERM 1078 1456651 - 1456661 + g 77 -8.2 -3.83026 | opp_overlap 1456646 GGGTCAAAAACCCAT GGGC AAA GCCC TTTGGTATAAAAAGC HY04AAS1_1540 1457882 - 1456998 - | glucose-1-phosphate thymidylyltransferase TERM 1079 1457624 - 1457636 + g 74 -4.1 -5.11063 | GAATAAGCCCTTCTG CTAAG CCC CTTGG TTTTTCTTGAATGAT HY04AAS1_1541 1457914 - 1458591 + | ABC transporter related HY04AAS1_1543 1459436 - 1460407 + | hypothetical protein TERM 1080 1460653 - 1460639 - g 74 -4.3 -4.98461 | opp_overlap 1460639 1460646 1460649, overlap 1460635 AAACAACAAAAGAAA GAAGA GTGGA TCTTC TTCTTGAGTTAGAAG HY04AAS1_1544 1460494 - 1461354 + | hypothetical protein TERM 1081 1461463 - 1461453 - f 76 -5.4 -5.11613 | ATACGATGTAAAAAA TGCT TCC AGCA CACTAGAGCGATGCA HY04AAS1_1545 1461877 - 1462077 + | hypothetical protein HY04AAS1_1546 1462109 - 1462360 + | addiction module toxin, Txe/YoeB family HY04AAS1_1547 1462531 - 1462806 + | hypothetical protein HY04AAS1_1548 1464445 - 1462910 - | protein of unknown function DUF1703 TERM 1082 1463612 - 1463637 + g 71 -4.2 -4.77165 | gap 1 AAATGTAGGCGTTGC TGTTTCAAACC AGTAA GGTTT-AAACA TTTTCTTATCAAACA TERM 1083 1465509 - 1465499 - g 81 -5.4 -5.11836 | overlap 1465487 AGATTTAAAAGAAAA CCTT CAA AAGG CAAAGGTGATGCTGC TERM 1084 1465752 - 1465771 + G 71 -8.6 -3.24232 | overlap 1465749 1465760 TACGAAAAGCGCTAC GAGGCTTT TCAA AAGGCCTC TATGTTTGGAGCAAA TERM 1085 1466097 - 1466066 - g 71 -8.8 -3.27408 | overlap 1466064 1466062 1466076 CGCCATGCAAATAGA TGTCTTCAAAGGTG AGGC CACCATCAAAGACA GCGTAGTCTCTTACA HY04AAS1_1549 1464543 - 1466546 + | CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit HY04AAS1_1550 1467275 - 1466547 - | ABC transporter related HY04AAS1_1551 1468069 - 1467272 - | ABC-2 type transporter HY04AAS1_1552 1469314 - 1468139 - | iron-containing alcohol dehydrogenase HY04AAS1_1553 1470074 - 1469325 - | oxidoreductase FAD/NAD(P)-binding domain protein HY04AAS1_1554 1470134 - 1470586 + | hypothetical protein TERM 1086 1470646 - 1470633 - g 76 -3.1 -5.41787 | gap 1, opp_overlap 1470633 GAAAAAATAGAAAAA GCCGCT TTG AG-GGC TTCTCGTAAAAAAGA HY04AAS1_1555 1470588 - 1471262 + | alanine racemase domain protein HY04AAS1_1556 1471262 - 1472182 + | tRNA(Ile)-lysidine synthetase TERM 1087 1472276 - 1472266 - g 81 -5.4 -5.24129 | CGCTGGTATAAAAAA TACG ATG CGTA TTACAAACGCCATGA TERM 1088 1472331 - 1472321 - g 71 -4.6 -4.72029 | GCTAAGCTAAGAAAA GCCC AAG AGGC TATATTCAAAGCAAG HY04AAS1_1557 1472213 - 1473091 + | ATP synthase F1, gamma subunit HY04AAS1_1558 1473142 - 1473561 + | molybdopterin biosynthesis MoaE protein TERM 1089 1473861 - 1473847 - gf 80 -8.6 -3.83768 | opp_overlap 1473844 1473847 AAAAGAATATGCAAA GCTTCT AAA AGAAGC TGGTCTTGATACTAT TERM 1090 1474451 - 1474435 - gf 83 -2.3 -5.84432 | overlap 1474437 CATAAGACAAAAAAA TATATCC AAC GAATACA TTATAAACAACGATT HY04AAS1_1559 1473530 - 1474513 + | Radical SAM domain protein HY04AAS1_1560 1474526 - 1475761 + | MiaB-like tRNA modifying enzyme HY04AAS1_1561 1475758 - 1476045 + | hypothetical protein HY04AAS1_1562 1476685 - 1476047 - | hypothetical protein TERM 1091 1477868 - 1477850 - g 82 -6.8 -4.93365 | opp_overlap 1477850 1477848 1477852, overlap 1477843 1477852 CGGCAGAACCAAAAA CATACCAA CAT TTGGTATA TGTCTTGGTATGCAG TERM 1092 1477866 - 1477852 - g 73 -7.2 -4.08682 | opp_overlap 1477852 1477850 1477848, overlap 1477850 1477843 GCAGAACCAAAAACA TACCAA CAT TTGGTA TATGTCTTGGTATGC TERM 1093 1478096 - 1478064 - g 76 -4.9 -5.00136 | AAAGAAAATACAAAA GCTTATGAGATTTAC AAA GAAAACCTCATATAC GAAAGACATAGGCAT HY04AAS1_1563 1476735 - 1478339 + | CTP synthase HY04AAS1_1564 1478343 - 1479104 + | flagellar basal body rod protein HY04AAS1_1565 1479977 - 1479108 - | hypothetical protein HY04AAS1_1566 1480038 - 1480682 + | thiamine-phosphate pyrophosphorylase HY04AAS1_1567 1480679 - 1481542 + | 5,10-methylenetetrahydrofolate reductase HY04AAS1_1568 1483820 - 1481544 - | heavy metal translocating P-type ATPase TERM 1094 1481661 - 1481651 - G 76 -3.2 -5.28176 | CGTATTTAGAAAAAA TACC AGC GGCA AAGGGTATCATGACA HY04AAS1_1569 1484556 - 1483879 - | ABC transporter related TERM 1095 1484846 - 1484834 - g 74 -4.1 -5.11063 | ATCATTCAAGAAAAA CCAAG GGG CTTAG CAGAAGGGCTTATTC HY04AAS1_1570 1484588 - 1485472 + | glucose-1-phosphate thymidylyltransferase TERM 1096 1485804 - 1485824 + G 78 -6.7 -4.64657 | opp_overlap 1485809, overlap 1485822 CTGATGCTTTTTATA CCAAAGGGC TTT GCCCATGGG TTTTTGACCCTTTCA TERM 1097 1485819 - 1485809 - g 77 -8.2 -3.83026 | opp_overlap 1485804 GCTTTTTATACCAAA GGGC TTT GCCC ATGGGTTTTTGACCC HY04AAS1_1571 1485462 - 1486034 + | dTDP-4-dehydrorhamnose 3,5-epimerase HY04AAS1_1572 1486038 - 1487030 + | dTDP-glucose 4,6-dehydratase HY04AAS1_1573 1487052 - 1488800 + | sulfate adenylyltransferase HY04AAS1_1575 1489061 - 1491301 + | Methyltransferase type 12 TERM 1098 1491577 - 1491539 - g 86 -8.3 -4.4522 | TAAAAGCAGAATAAA CCCTCTTTTACACTATA TCTTG TATGGCGCAAAAGAAGG AAGATGGGCAGGGCC HY04AAS1_1576 1491306 - 1493546 + | glycosyl transferase family 2 HY04AAS1_1577 1493550 - 1494497 + | glycosyl transferase family 2 HY04AAS1_1578 1494494 - 1495411 + | glycosyl transferase family 2 HY04AAS1_1579 1495980 - 1495504 - | rfaE bifunctional protein HY04AAS1_1580 1496096 - 1497625 + | protein of unknown function DUF1703 TERM 1099 1497905 - 1497895 - f 74 -6.8 -4.24887 | AAGAGATTTAAGAAA TGCC TTT GGCA CACTAGAGTGGTTTA TERM 1100 1498134 - 1498112 - g 74 -4.8 -4.72272 | opp_overlap 1498096 1498109 TTTTTTTATGAAAAA CACTATCCTT AAA AGGGGTAGTG TAGCTGTTGCTGTCT TERM 1101 1498161 - 1498174 + G 70 -8.1 -3.40403 | GTCTTAGGTATTGGA GCGCT TTTA AGCGC TTGTGGTGGAGGCGG HY04AAS1_1581 1498104 - 1499183 + | hypothetical protein TERM 1102 1499200 - 1499224 + T 79 -8.4 -4.13282 | TAGTGTTTATAGTTG GCCCCTTGGC TTTTT GCCTCGGGGC TTTTAAAAATATAAT HY04AAS1_1582 1500272 - 1499253 - | phosphoesterase RecJ domain protein TERM 1103 1500175 - 1500164 - G 78 -5.8 -4.72373 | TTAAAAAAATATAAA GTGC CAAT GCAC TGCCAAGGGTATCAC HY04AAS1_1583 1502709 - 1500292 - | phosphoenolpyruvate synthase TERM 1104 1501627 - 1501647 + g 80 -6.2 -4.97158 | TAGTATTCTATGTGG GATCCTTT CTTCA AGAGGATC TTTTATTTCATATAC HY04AAS1_1584 1504159 - 1502726 - | molydopterin dinucleotide-binding region TERM 1105 1503988 - 1503973 - G 72 -7.6 -3.81256 | opp_overlap 1503971 1503969, overlap 1503969 AGTCCGAAAAAGGAA GCTCTT GAAC AAGAGC TATGCCTTTTGTGCA TERM 1106 1504123 - 1504133 + g 72 -4 -5.0538 | AATGACCTATTAGCT CTTT ATC AAAG TTTTTTGAACTAAGA HY04AAS1_1585 1504950 - 1504168 - | enoyl-(acyl-carrier-protein) reductase (NADH) HY04AAS1_1586 1505771 - 1504968 - | predicted phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1107 1505092 - 1505102 + g 76 -6.8 -4.386 | CCTATAGAAAGCCCA GCTG CTC CAGC TTTTATGGCCCCTTC HY04AAS1_1587 1507773 - 1505773 - | glycyl-tRNA synthetase, beta subunit TERM 1108 1506321 - 1506309 - G 74 -4.9 -4.7416 | opp_overlap 1506309 CTAAAAGCTCAAAAA CTTTT CCA AAAAG CTCTTCTAAATTTAT TERM 1109 1507512 - 1507502 - G 70 -3.2 -5.00616 | TTTTTCTTTAAAAAA GCCT CTA AAGC TTTTGTAGGAACTCC TERM 1110 1507642 - 1507653 + g 70 -3 -5.20633 | GGTTGTAAATAAGCT GATA GTTT TATC TTTTTCTATATTTTT HY04AAS1_1588 1508618 - 1507770 - | glycyl-tRNA synthetase, alpha subunit HY04AAS1_1589 1508676 - 1508966 + | DNA polymerase beta domain protein region HY04AAS1_1590 1508957 - 1509364 + | nucleotidyltransferase substrate binding protein, HI0074 family HY04AAS1_1591 1510604 - 1509366 - | FolC bifunctional protein TERM 1111 1509469 - 1509490 + g 95 -8.1 -4.72386 | opp_overlap 1509469 TTTGCGTCTTCTAAA GTATGGGTT TTAA AACCTATAC TTTTTGCATAATTTA HY04AAS1_1592 1512190 - 1510601 - | polynucleotide adenylyltransferase/metal dependent phosphohydrolase TERM 1112 1510660 - 1510690 + g 76 -4.8 -5.04249 | overlap 1510661 1510668 CTTCTTCTTTTGTCT TTATTGCACCTTCG TAT TGAAGGTCTAATAG TTTATTTTTTAAAAG HY04AAS1_1593 1512668 - 1512183 - | CDP-alcohol phosphatidyltransferase TERM 1113 1513098 - 1513116 + G 71 -5.2 -4.66264 | overlap 1513100 AGTGGAGTTAAAATG CTCTTCTG ATA CAGAGGTG TTTTTAGGGCTTTTA HY04AAS1_1594 1512703 - 1514097 + | amidophosphoribosyltransferase HY04AAS1_1595 1514094 - 1514312 + | hypothetical protein HY04AAS1_1596 1514338 - 1515414 + | protein of unknown function DUF354 TERM 1114 1515741 - 1515755 + G 76 -10 -3.08776 | opp_overlap 1515740, overlap 1515737 TAAACTTTAACTCAT CTTCGG ACA CCGAAG TGCTTTTAAAAGCTT TERM 1115 1516368 - 1516384 + G 81 -8.1 -4.20516 | GCGAGCTTGATTGGG CTTTGAA AGT TTCAAAG TTTATTGGATCAAGC HY04AAS1_1597 1515416 - 1517338 + | asparagine synthase (glutamine-hydrolyzing) HY04AAS1_1598 1517644 - 1517327 - | CutA1 divalent ion tolerance protein HY04AAS1_1599 1517677 - 1517970 + | hypothetical protein HY04AAS1_1600 1517971 - 1518117 + | hypothetical protein TERM 1116 1518154 - 1518170 + F 83 -9.5 -3.794 | opp_overlap 1518122 1518154 AATTTGAGTCAAAAA CGTTTTG ATA CAAAACG TTTGATAAGTTCAGA TERM 1117 1518170 - 1518154 - f 93 -9.5 -4.67011 | opp_overlap 1518154, overlap 1518122 AATTTGAGTCAAAAA CGTTTTG ATA CAAAACG TTTGATAAGTTCAGA HY04AAS1_1601 1518265 - 1518711 + | hypothetical protein HY04AAS1_1602 1518708 - 1519925 + | protein of unknown function DUF208 HY04AAS1_1603 1519873 - 1520670 + | 2-dehydro-3-deoxyphosphooctonate aldolase HY04AAS1_1604 1520673 - 1521308 + | hypothetical protein HY04AAS1_1605 1521385 - 1522329 + | hypothetical protein TERM 1118 1522323 - 1522340 + T 74 -5.7 -4.57569 | opp_overlap 1522321 1522315 TAAAAGATTAAAAGA TACTTAA AGCT TTAAGTA TTTTTAAAAGCCTAA HY04AAS1_1606 1523400 - 1522477 - | hypothetical protein TERM 1119 1523468 - 1523458 - H 71 -5.4 -4.72272 | TTTGGCTAGTAAAAA TACC TTT GGTA CACTAGAGTGTGTGA TERM 1120 1523922 - 1523935 + G 70 -6.7 -4.10795 | opp_overlap 1523922 GTAATATTAGAAGAA GATGG CTTT CCATC TTTGAGTTTTTTTGG HY04AAS1_1607 1523619 - 1524839 + | hypothetical protein HY04AAS1_1608 1524836 - 1525933 + | methyltransferase FkbM family HY04AAS1_1609 1527188 - 1525938 - | hypothetical protein HY04AAS1_1610 1528417 - 1527185 - | hypothetical protein TERM 1121 1527808 - 1527820 + g 78 -6.3 -4.86385 | opp_overlap 1527772 TAAAAGCCTTTAGAG CGTTT GCT AAACG TTTGTTTTTAAAGCT HY04AAS1_1611 1529375 - 1528434 - | NAD-dependent epimerase/dehydratase TERM 1122 1532300 - 1532325 + G 71 -9.1 -3.21276 | opp_overlap 1532297 1532298, overlap 1532298 1532303 AAAGTTTTAGAAGCT CTTTCAAAAGC AGGG GCTTTTGATAG TCTTATAGAAAAAAG TERM 1123 1532303 - 1532322 + G 73 -9.4 -2.80074 | opp_overlap 1532297 1532298, overlap 1532300 1532298 GTTTTAGAAGCTCTT TCAAAAGC AGGG GCTTTTGA TAGTCTTATAGAAAA HY04AAS1_1612 1529552 - 1533157 + | DNA polymerase III, alpha subunit HY04AAS1_1613 1533214 - 1534224 + | phosphate ABC transporter, periplasmic phosphate-binding protein TERM 1124 1534259 - 1534283 + G 72 -8.5 -3.48276 | opp_overlap 1534258 1534260 1534262 1534275, overlap 1534262 TGATAGAATTAAAAG ATAGCGGGGTT ATA AGCCCCGCTGC TTCTATGAAAAGAAA TERM 1125 1534282 - 1534260 - g 74 -7.6 -3.86903 | opp_overlap 1534259 1534262, overlap 1534258 1534262 1534275 GATAGAATTAAAAGA TAGCGGGGTT ATA AGCCCCGCTG CTTCTATGAAAAGAA TERM 1126 1534280 - 1534262 - g 80 -10.2 -3.50325 | opp_overlap 1534262 1534259, overlap 1534260 1534258 1534275 TAGAATTAAAAGATA GCGGGGTT ATA AGCCCCGC TGCTTCTATGAAAAG TERM 1127 1534262 - 1534280 + G 84 -12.4 -2.88822 | opp_overlap 1534260 1534258 1534262 1534275, overlap 1534259 TAGAATTAAAAGATA GCGGGGTT ATA AGCCCCGC TGCTTCTATGAAAAG HY04AAS1_1614 1534243 - 1535238 + | phosphate ABC transporter, inner membrane subunit PstC HY04AAS1_1615 1535226 - 1536122 + | phosphate ABC transporter, inner membrane subunit PstA HY04AAS1_1616 1536139 - 1536921 + | phosphate ABC transporter, ATPase subunit TERM 1128 1537106 - 1537094 - g 73 -3.5 -5.16681 | opp_overlap 1537089, overlap 1537086 TTAAAAATAAGAAAA TAAAT ATT ATTTA CTCATCTTTTCAAAA HY04AAS1_1617 1536952 - 1537551 + | Phosphoglycerate mutase HY04AAS1_1618 1537548 - 1537835 + | hypothetical protein HY04AAS1_1619 1537839 - 1538270 + | SNARE associated Golgi protein HY04AAS1_1620 1539077 - 1538265 - | Prephenate dehydrogenase HY04AAS1_1621 1539896 - 1539078 - | UspA domain protein TERM 1129 1539869 - 1539853 - G 91 -9.5 -4.49337 | opp_overlap 1539856, overlap 1539848 TGAGAAGCCACAAAA GATGGTT TTG AACCATC TAAGCCTACTATCAC HY04AAS1_1622 1542249 - 1539889 - | DNA gyrase, B subunit TERM 1130 1540218 - 1540231 + g 80 -6.7 -4.87665 | TAAAAAATTCTTTAT GCTCT TCAA AGAGC TTTTTGTAGGTACCA TERM 1131 1540533 - 1540546 + g 70 -6.7 -4.07647 | opp_overlap 1540532 TGTTTATTAGTACAT CACCT CTAT AGGTG TTTGATTTGGCGTCT TERM 1132 1541228 - 1541242 + g 71 -4.2 -4.82998 | overlap 1541229 ACTATGTTTTTTGTT TCTTGG TTG CCAAGC TTTGTTTTGGTTTGG TERM 1133 1543270 - 1543246 - g 93 -6.5 -5.60993 | opp_overlap 1543246 1543248, overlap 1543248 TGCCCCAGAAAAAAA CATAGCCGATA AGA TATCTGCTATA TTTGTCCCCACCATT TERM 1134 1543268 - 1543248 - g 79 -6.9 -4.45201 | opp_overlap 1543246 1543248, overlap 1543246 CCCCAGAAAAAAACA TAGCCGATA AGA TATCTGCTA TATTTGTCCCCACCA TERM 1135 1544147 - 1544159 + G 88 -7.7 -4.73388 | GTTGCAAGGATATCT GCAAG CAT CTTGC TTTTTAATAGAAATT HY04AAS1_1623 1542347 - 1544377 + | heavy metal translocating P-type ATPase HY04AAS1_1624 1544402 - 1544911 + | protein of unknown function DUF996 HY04AAS1_1625 1545606 - 1544914 - | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase HY04AAS1_1626 1545655 - 1546119 + | protein of unknown function DUF150 HY04AAS1_1627 1546113 - 1547081 + | NusA antitermination factor TERM 1136 1548095 - 1548084 - g 73 -2.2 -5.40072 | opp_overlap 1548068 TCTTTTTGAAAAAAA GCCT ATAT AAGC ACGCAAACCTTCTTG HY04AAS1_1628 1547081 - 1548328 + | RNA methyltransferase, TrmA family HY04AAS1_1629 1548325 - 1549590 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1137 1549615 - 1549601 - T 88 -8.5 -4.51196 | CTTAAATTTATAAAA GCCCC AAAAA GGGGC TACAAAATAATTAAA HY04AAS1_1630 1550447 - 1549626 - | hypothetical protein HY04AAS1_1631 1550560 - 1551567 + | Alcohol dehydrogenase GroES domain protein HY04AAS1_1632 1551578 - 1552012 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding HY04AAS1_1633 1552009 - 1553850 + | Primosomal protein N' (replication factor Y) - superfamily II helicase-like HY04AAS1_1634 1553918 - 1554487 + | CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit HY04AAS1_1635 1554502 - 1555707 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein TERM 1138 1556111 - 1556127 + G 80 -5.9 -5.00616 | GTTGATATAGGTTTA GATTGTA CAT TGCAATC TTTTTTCAGACAAGA TERM 1139 1556373 - 1556360 - g 76 -2.4 -5.43866 | CAAGCTGTAAAAAAA GCTA TATACG TAGC TAGAGAAGTAGGTCC HY04AAS1_1636 1555697 - 1556557 + | thiamine pyrophosphate protein domain protein TPP-binding HY04AAS1_1637 1556554 - 1557294 + | pyruvate/ketoisovalerate oxidoreductase, gamma subunit HY04AAS1_1638 1558379 - 1557330 - | oxygen-independent coproporphyrinogen III oxidase HY04AAS1_1639 1558699 - 1558367 - | protein of unknown function UPF0102 HY04AAS1_1640 1559430 - 1558696 - | protein of unknown function DUF62 TERM 1140 1559316 - 1559291 - G 76 -4.8 -4.91873 | opp_overlap 1559294, overlap 1559294 GAGACCAAGTAAAAA GCACCTTTTA GTATGT TAAAAGGTTC TATGTTGTGTGTGAT