TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.528121 %AT, 1903399 nt, 14807 terms. Intergenic: 0.588419 %AT, H2T: 278533 nt, 2512 terms; T2T: 86860 nt, 1945 terms; H2H: 91710 nt, 1283 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|116332681|ref|NC_008497.1| Lactobacillus brevis ATCC 367, complete genome (length 2291220) TERM 1 410 - 396 - g 76 -7.1 -4.4267 | CCTTAAAAGCCAAAA CCGCA CCCGT TGCGG CTGGCGAACCGGTTG LVIS_0001 113 - 1471 + | DNA replication ATPase initiation LVIS_0002 1742 - 2881 + | DNA polymerase sliding clamp subunit TERM 2 2936 - 2980 + F 73 -3.5 -4.95758 | opp_overlap 2937 2938, overlap 2938 TTTGTGAGGCAAAAA ACGCCGCGGTAATCAGCG-CC TAAAT GGTCGCTGGT-GCTGCGGCTC TTTTTGTGGTGTAGT TERM 3 2953 - 2937 - f 73 -2.9 -5.08824 | opp_overlap 2936 2938, overlap 2938 TTGTGAGGCAAAAAA CGCCG CGGTAAT CAGCG CCTAAATGGTCGCTG TERM 4 2938 - 2978 + F 91 -10.5 -4.09649 | opp_overlap 2937 2938, overlap 2936 TGTGAGGCAAAAAAC GCCGCGGTAATCAGCG-CC TAAAT GGTCGCTGGT-GCTGCGGC TCTTTTTGTGGTGTA TERM 5 3133 - 3151 + F 71 -3 -4.93365 | overlap 3135 3136 CCAAAAATGAGTGAT TTCCGCCA TAA TGGCGCTA TTTTTAATTCTCAGC LVIS_0003 3301 - 3528 + | S4-like RNA-binding protein TERM 6 3905 - 3925 + G 83 -9 -4.45083 | gap 1, opp_overlap 3904 3903, overlap 3904 AGCCATTGTGAAAGG CG-CGCCGA CAGT TCGGCGGCG TTTTATGGATATGGA recF 3528 - 4682 + | recombination protein F LVIS_0005 4686 - 6629 + | DNA gyrase, B subunit LVIS_0006 6651 - 9185 + | DNA gyrase, A subunit TERM 7 9202 - 9228 + F 100 -13.1 -5.48054 | TAATAGTGAAACGTG GGACTTTGCCA AGATC TGGCAGAGTCC TTTTTTGGTTTTCAT TERM 8 9422 - 9466 + F 71 -8.9 -3.40403 | opp_overlap 9429 9459 9460, overlap 9426 GGCTGGAACGTACCG GACACGA-CTTTAAGCCAAGT AGATC ACTTGTCTTAAAGGTCG-GTC TTATCCTAAGCGCGC TERM 9 9459 - 9429 - f 74 -10.6 -2.63715 | opp_overlap 9426 9422 ACGTACCGGACACGA CTTTAAGCCAAGTA GAT CACTTGTCTTAAAG GTCGGTCTTATCCTA rpsF 9954 - 10250 + | 30S ribosomal protein S6 LVIS_0008 10284 - 10850 + | single-stranded DNA-binding protein LVIS_0009 10879 - 11115 + | ribosomal protein S18 TERM 10 11123 - 11149 + T 100 -11.6 -5.10767 | opp_overlap 11112 11123 11122 11125 AAGAGTAGTCTAAAT GACGACTGACCT TTT GGGTTGGTCGTC TTTTTATGTTCCGTG TERM 11 11246 - 11214 - T 100 -16.4 -4.62203 | opp_overlap 11214 GTGAAACAATTAAAA TCCCCGTAGCGTCA GTTGA TGACGGTACGGGGA TTAGTCGTTGCAATT TERM 12 11214 - 11246 + T 100 -16.4 -3.28041 | opp_overlap 11214 GTGAAACAATTAAAA TCCCCGTAGCGTCA GTTGA TGACGGTACGGGGA TTAGTCGTTGCAATT LVIS_0010 12447 - 11260 - | imidazolonepropionase related amidohydrolase TERM 13 11511 - 11501 - G 71 -6.8 -4.28774 | GGAGTTAAGTCAAAA CCGT TGA ACGG CGTACCCGCATCGGT LVIS_0011 14085 - 12478 - | ABC-type oligopeptide transport system, periplasmic component TERM 14 14093 - 14078 - G 81 -6.2 -4.88405 | AAGGTCCAAACAAAA TGTTTC ATGT GAAACA CCCTCCTAGTGCCAA TERM 15 14173 - 14139 - H 100 -15.1 -5.45802 | opp_overlap 14139 14168 14168 CGCGGAAAATAAAAA GCACCCCCACGGAAA TAACT TCTCCGTAAGGGTGC TGTTCGCACGGTACC LVIS_0012 14694 - 15470 + | D-alanyl-D-alanine carboxypeptidase TERM 16 15495 - 15537 + T 100 -10.1 -4.61231 | opp_overlap 15495 15497 TTATGGCAATACAGA TATGGACCCAAATCTCG TTAAAGTTC TGAGATTTAGGTCCATA TTTTTAACGCTATAG TERM 17 15537 - 15495 - T 84 -11.6 -3.10245 | opp_overlap 15495, overlap 15497 TTATGGCAATACAGA TATGGACCCAAATCTC GTTAAAGTTCT GAGATTTAGGTCCATA TTTTTAACGCTATAG TERM 18 15535 - 15497 - T 74 -9.8 -3.10761 | opp_overlap 15495, overlap 15495 ATGGCAATACAGATA TGGACCCAAATCTC GTTAAAGTTCT GAGATTTAGGTCCA TATTTTTAACGCTAT LVIS_0013 16787 - 15603 - | imidazolonepropionase related amidohydrolase TERM 19 16143 - 16157 + g 71 -7 -3.97834 | overlap 16141 ACCTTCAGCGTGGGC CGCCAC GAT GCGGCG TTTATGGTGGGCTTC TERM 20 16489 - 16515 + g 71 -6.5 -4.25104 | opp_overlap 16505, overlap 16490 16505 16507 TCACGAATGTAGGTG ACTCCGGACTT GAGAA GGGTCCGGAGA TTTTCGTAGGCGAAG TERM 21 16490 - 16514 + g 70 -10 -3.14848 | opp_overlap 16505, overlap 16489 16505 16507 CACGAATGTAGGTGA CTCCGGACTT GAGAA GGGTCCGGAG ATTTTCGTAGGCGAA LVIS_0014 18410 - 16809 - | ABC-type oligopeptide transport system, periplasmic component TERM 22 16843 - 16886 + g 71 -8.4 -3.76125 | gap 1, opp_overlap 16858, overlap 16848 16850 TGGTATTGGGCATCG TTGAGTAGCGAGTAAGTTAGG CCG CC-AACTTGCTTGCTAATTAA TTTCGCTTCAGATGG TERM 23 18240 - 18266 + g 76 -11.6 -2.78813 | overlap 18239 18242 CATGGTTTGGGCGAT GACGCTGGCACT GTT GGTGTCAGTGTC CTTGTTGGGGTCAAC TERM 24 18499 - 18466 - R 100 -20.5 -4.66833 | GGGGAACGGCAAAAA GCGCCCTTACAGAAA AATT TCTCTGTAAGGGCGC TTGCGCACGGTACCA LVIS_0015 19532 - 18966 - | transcriptional regulator TERM 25 19627 - 19589 - H 70 -7.7 -3.73088 | gap 1, opp_overlap 19589 19625 ACACGGTATTAACAA GTGGAATGTATTCCA-AT TATG ATATGGAACATATTCCAC TTTTAATTGAAAGGT TERM 26 19589 - 19627 + H 79 -7.7 -4.41047 | gap 1, opp_overlap 19589, overlap 19625 ACACGGTATTAACAA GTGGAATGTATTCCA-AT TATG ATATGGAACATATTCCAC TTTTAATTGAAAGGT LVIS_0016 19652 - 19909 + | permease TERM 27 19918 - 19941 + F 79 -6.8 -4.60889 | gap 1, opp_overlap 19918 CGATTAAATACAGAA CGGC-TTAATC GCT GGTTAATGCCG TTTTTAGGGGTAATT TERM 28 21241 - 21228 - g 70 -8.1 -3.92641 | opp_overlap 21238, overlap 21232 AACCCGATGGAGAAA CGGAC GCGG GTCCG CGCACGGATGATCTC TERM 29 21617 - 21590 - g 73 -7.1 -4.14739 | gap 1 TCATCGATTGGAAAA CCGCGTGATGAT TATTG ACCATCAC-CGG CGGGGTGAAGAATTC LVIS_0017 20244 - 22259 + | signal protein rplI 22328 - 22786 + | 50S ribosomal protein L9 TERM 30 22800 - 22817 + F 91 -6.9 -5.45802 | opp_overlap 22800 AGTCTGTGTTTGAAA GGTCGCC GCTG GGTGGCC TTTTTCTTTTGGGGA LVIS_0019 22962 - 23180 + | hypothetical protein TERM 31 23233 - 23197 - f 100 -13.2 -5.05079 | gap 1, opp_overlap 23197 ATAACCACAGAAAAA GCAGATTGTCACC-ATC GCAT GTTCGGTGACAATCTGC TTTTTGGTGTTATGC TERM 32 23197 - 23233 + F 100 -13.2 -4.90906 | gap 1, opp_overlap 23197 ATAACCACAGAAAAA GCAGATTGTCACC-ATC GCAT GTTCGGTGACAATCTGC TTTTTGGTGTTATGC LVIS_0020 23692 - 25080 + | replicative DNA helicase TERM 33 25094 - 25125 + T 100 -8.8 -4.85782 | opp_overlap 25094 AATGATGAAAGGTAA TCCGATCAACCAAT GTAA ATTTGGTGATCGGA TTTATTTTTGGGCAA TERM 34 25125 - 25094 - T 71 -8.8 -3.31817 | opp_overlap 25094 AATGATGAAAGGTAA TCCGATCAACCAAT GTAA ATTTGGTGATCGGA TTTATTTTTGGGCAA TERM 35 25280 - 25290 + T 78 -4 -5.23316 | opp_overlap 25280 GGTGCTTCTACCAAA GATT AAC AATC TTTTTTCATGTACTC TERM 36 25365 - 25331 - T 80 -3.6 -5.37865 | overlap 25333 GGAATAATGAAAAAA TAGTTAACGTCATTCT TAT ATAATGACGTTACCCC TACTCCGATGACCAT TERM 37 25363 - 25333 - T 82 -8.4 -4.30543 | overlap 25331 AATAATGAAAAAATA GTTAACGTCATTCT TAT ATAATGACGTTACC CCTACTCCGATGACC TERM 38 25378 - 25398 + T 100 -5.4 -6.3578 | overlap 25371 CCCTACTCCGATGAC CATCGCTT TCCCC GAGCGGTG TTTTTTTTTTGGCCT TERM 39 25458 - 25418 - T 100 -14.2 -4.07568 | opp_overlap 25418 TTTTTTGGCCTAAAA TAGCGGCAACTTCAGT TCTAATCAT ACCGAAGTCGCCGCTA TTTTTATGTAATCTA TERM 40 25418 - 25458 + T 100 -9.8 -5.02502 | opp_overlap 25418 TTTTTTGGCCTAAAA TAGCGGCAACTTCAGT TCTAATCAT ACCGAAGTCGCCGCTA TTTTTATGTAATCTA LVIS_0021 26001 - 25471 - | multimeric flavodoxin WrbA LVIS_0022 26142 - 27383 + | major facilitator superfamily permease LVIS_0023 27380 - 27649 + | hypothetical protein TERM 41 27667 - 27653 - f 90 -5.8 -5.47159 | GTGAATAAATAAAAA GATTTA TCG TAAATC TGAGCTATTTTTTAA TERM 42 27697 - 27724 + F 100 -14.2 -5.26316 | AGCTATATTCAAGTG GACGACCTTACG GCGA CGTGGGGTCGTC TTTTTTATACACTGA TERM 43 28021 - 28063 + F 100 -12.1 -5.60993 | gap 1, overlap 28015 AGGTGGTACCGCGAA TCGTTCGCCCTTGTTGACCG GAGA CGGCCAACGA-GACGAACGA TTTTTTTGTGGCGAA TERM 44 28402 - 28391 - g 72 -5.8 -4.44355 | TAAGCTCAAAAAGAA TGCC AAAT GGCA AAATGGTGACGCGGT LVIS_0024 28098 - 29708 + | ABC-type oligopeptide transport system, periplasmic component TERM 45 29757 - 29706 - f 84 -11 -3.60296 | opp_overlap 29715, overlap 29693 29715 TACGCTTATTGGAAA TAACGAAAATGCCTCGCGATGATC TGGT GATCAAAGCGGGGCATTTTTATTA GTCGCATTATAATGG TERM 46 29715 - 29748 + F 100 -11.7 -5.1356 | opp_overlap 29706 29715 TGGAAATAACGAAAA TGCCTCGCGATGATC TGGT GATCAAAGCGGGGCA TTTTTATTAGTCGCA TERM 47 29748 - 29715 - f 100 -9.5 -4.62203 | opp_overlap 29715, overlap 29706 TGGAAATAACGAAAA TGCCTCGCGATGATC TGGT GATCAAAGCGGGGCA TTTTTATTAGTCGCA LVIS_0025 29914 - 30153 + | hypothetical protein TERM 48 30189 - 30168 - Tf 100 -12.3 -4.89852 | opp_overlap 30168 GTATAGTGAGAAAAA GCGTTGACC AATT GGCCAACGC TTTTCAGTGTAGCAT TERM 49 30168 - 30189 + TF 88 -10.1 -4.23758 | opp_overlap 30168 GTATAGTGAGAAAAA GCGTTGACC AATT GGCCAACGC TTTTCAGTGTAGCAT LVIS_0026 30903 - 30193 - | Zn-dependent protease LVIS_0027 30902 - 31045 + | hypothetical protein TERM 50 31439 - 31406 - fH 100 -10.3 -5.626 | opp_overlap 31406 GAGGGTACAAAAAAA TCAGCAACCACGAAG TCGA CTTCGTGAAAGCTGA TTAGTAAGTGATGGG TERM 51 31600 - 31624 + FH 95 -3 -5.91981 | overlap 31597 TGCGCAACCCCTTTT TTGAAAAAAA CTGAT TTTTATTCAA TTTTTTTTGCATTTT LVIS_0029 32160 - 32876 + | DNA-binding response regulator TERM 52 34209 - 34194 - g 74 -6.8 -4.31293 | overlap 34198 TGACACAGGAAGAAA CGGACC GGAT GATCCG GATGATCAATGACCT LVIS_0030 32921 - 34777 + | Signal transduction histidine kinase TERM 53 35878 - 35858 - g 78 -5.3 -4.92314 | overlap 35848 ACCAACGGATAAAAA GTCCGCGAC GTT GCCAGGGAC CCAACAGGTCATTGA LVIS_0031 34764 - 36065 + | hypothetical protein LVIS_0032 36088 - 36942 + | hypothetical protein TERM 54 36960 - 36977 + F 100 -9.1 -5.15634 | opp_overlap 36952 36960 AAAATGATGTGAAGA GGCTGCC GCGG GGTAGCC TTTTTTCATGAACTA LVIS_0033 37088 - 37915 + | beta-lactamase superfamily hydrolase LVIS_0034 38062 - 39408 + | trypsin-like serine protease TERM 55 39449 - 39422 - f 74 -7.6 -4.06055 | gap 1, opp_overlap 39422 AGGCGCTAAATGAAA GCGACCG-TGGGA ATT TCCCTGCGGGCGC TTTTTTAGTATGATA TERM 56 39422 - 39449 + F 100 -9.8 -5.23316 | gap 1, opp_overlap 39422 AGGCGCTAAATGAAA GCGACCGT-GGGA ATT TCCCTGCGGGCGC TTTTTTAGTATGATA TERM 57 39718 - 39684 - f 73 -7.3 -4.09739 | overlap 39685 GGAACCGGTGCAAAA GTTATCCACAGGTAT TGGGG ATAACTGTGGATAAT AAAAGTATTGATCGC TERM 58 39717 - 39685 - f 79 -10.8 -3.05522 | overlap 39684 GAACCGGTGCAAAAG TTATCCACAGGTAT TGGGG ATAACTGTGGATAA TAAAAGTATTGATCG LVIS_0035 39945 - 40424 + | SPOUT methyltransferase superfamily protein TERM 59 40410 - 40429 + F 91 -8.6 -4.62069 | ATTAATGAGGGGAGT CCGTATCA TAAG TGATGCGG TTTTTCAGGTAAGAA LVIS_0036 40495 - 41859 + | hypothetical protein TERM 60 41943 - 41970 + F 91 -6.2 -5.5353 | gap 1, opp_overlap 41944, overlap 41944 GTTTGTGAACAAAAA TCGG-GGGGCCTT TGA GGGGCTCCGCCGG TTTTTTCTTGCTGTG TERM 61 41944 - 41969 + F 70 -7.5 -3.90491 | gap 1, opp_overlap 41944, overlap 41943 TTTGTGAACAAAAAT CGG-GGGGCCTT TGA GGGGCTCCGCCG GTTTTTTCTTGCTGT TERM 62 42065 - 42091 + F 79 -11 -3.10409 | overlap 42056 42067 TGTGCTGCTCCTTGC GAGCATGAAC AAGGGAC GTTCATGCTC TTGGGTCGCTTGCTA LVIS_0037 42690 - 42914 + | hypothetical protein TERM 63 42989 - 43025 + T 100 -11.1 -5.29385 | opp_overlap 42989 TTTGGCAATTAAAAA CTAGTCCTAGAAATCAT AAA ATAATTTCTAAGACTAG TTTTTTCGTTACCTT TERM 64 43025 - 42989 - T 100 -15.5 -4.8622 | opp_overlap 42989 TTTGGCAATTAAAAA CTAGTCCTAGAAATCAT AAA ATAATTTCTAAGACTAG TTTTTTCGTTACCTT LVIS_0038 43328 - 43173 - | hypothetical protein TERM 65 43202 - 43231 + g 70 -7.9 -3.83205 | opp_overlap 43202, overlap 43203 ATTTTTTGTAAGTCA TTGGTAGTTTTCG GTAA CGAATACTACCAC TTTCATCTAAAACGT TERM 66 43203 - 43230 + g 76 -11.4 -2.89602 | opp_overlap 43202, overlap 43202 TTTTTTGTAAGTCAT TGGTAGTTTTCG GTAA CGAATACTACCA CTTTCATCTAAAACG LVIS_0039 43802 - 43341 - | hypothetical protein TERM 67 43630 - 43650 + g 73 -2.5 -5.17353 | overlap 43631 GTACCAGACCCCTTG ATTCCCATA TAC TTTGGGAAC TTTTTTACTGAGTGT TERM 68 44038 - 44008 - R 89 -6.1 -5.27923 | GAAGGCGACAAAAAA CGGCTAACCAGCC TTAGC GACCAGTCAACCG TTTCTCAGCAACCAC TERM 69 44050 - 44080 + r 89 -3.9 -5.58522 | gap 1, opp_overlap 44050, overlap 44051 ACCGTTTCTCAGCAA CCACC-ACCGCGCG TTTT CTTGCGGTTGGTGA TTTTTATTTTATATA TERM 70 44051 - 44079 + r 72 -7.4 -3.92673 | gap 1, opp_overlap 44050, overlap 44050 CCGTTTCTCAGCAAC CACC-ACCGCGCG TTTT CTTGCGGTTGGTG ATTTTTATTTTATAT LVIS_0040 45985 - 44102 - | 5'-nucleotidase/2',3'-cyclic phosphodiesterase related esterase TERM 71 45199 - 45224 + g 71 -4.7 -4.57073 | overlap 45189 45202 CAATCGTCTTGGCTT CATCCAAAACT TGGT AGTTTTGGTAG TTTTTCAACAGAGTC LVIS_0041 46626 - 46138 - | acetyltransferase TERM 72 46893 - 46879 - H 70 -5.8 -4.26351 | GATGAAGCGAAGAAA TAATGA TGT TCATTA AAAAATATATCTATA TERM 73 47024 - 47009 - g 81 -6.2 -4.93877 | opp_overlap 47011 TTTTACCAAAGAAAA GAGATT ACAG AATCTC ATTGAAGACAATATT LVIS_0042 46881 - 47195 + | hypothetical protein LVIS_0043 48102 - 47179 - | IS30 family transposase LVIS_0045 50981 - 49185 - | transposase LVIS_0044 48303 - 49328 + | site-specific DNA methylase TERM 74 49419 - 49375 - Gf 76 -10.1 -3.29144 | opp_overlap 49377, overlap 49376 49380 CTAGTCTCTTTATAA TGGAATAGGACGAGAAACCGA TCT TTGTTTTCTCGTCCTATTCTT TTGCTCTTGGAGTTG TERM 75 49418 - 49376 - Gf 93 -13.6 -2.57344 | opp_overlap 49377, overlap 49375 49380 TAGTCTCTTTATAAT GGAATAGGACGAGAAACCGA TCT TTGTTTTCTCGTCCTATTCT TTTGCTCTTGGAGTT TERM 76 49377 - 49417 + gF 100 -19.3 -4.43012 | opp_overlap 49376 49375 49380 AGTCTCTTTATAATG GAATAGGACGAGAAACCGA TCT TTGTTTTCTCGTCCTATTC TTTTGCTCTTGGAGT TERM 77 49414 - 49380 - Gf 95 -13 -3.23274 | opp_overlap 49377, overlap 49376 49375 CTCTTTATAATGGAA TAGGACGAGAAACCGA TCT TTGTTTTCTCGTCCTA TTCTTTTGCTCTTGG TERM 78 50292 - 50312 + gF 82 -3.1 -5.50723 | overlap 50294 AACTAGTTTCCGTTT CTTTGCTCG GAA CGTGCGACG TTTTTGTTTTGCTGG TERM 79 50331 - 50356 + gF 73 -9.8 -3.00651 | gap 1, overlap 50330 TTGTTTTGCTGGATT TGGCG-AGACC TTTTC GGTCTCCGCCA CTTTCTGCTCTAAAA TERM 80 50723 - 50738 + gF 100 -10.4 -4.64861 | overlap 50722 GAACTTGGTTGCTGG CCAGCC ATCC GGCTGG TTTATTTTCACGCGC TERM 81 51012 - 51033 + FH 100 -8 -5.8901 | CGGGGATAATCTGTG GGTATCGG GTGTGA CCGATGCC TTTTTTATTTTCTAT TERM 82 51098 - 51059 - fH 100 -18 -4.371 | opp_overlap 51060, overlap 51060 TCTATTATATCAAAA GGCTGTCCAGTGAGAATC CGAA GATTCTCACTGGACCGCT TTATTTGTGGAGACT TERM 83 51097 - 51060 - fH 100 -21.5 -3.21778 | opp_overlap 51060, overlap 51059 CTATTATATCAAAAG GCTGTCCAGTGAGAATC CGAA GATTCTCACTGGACCGC TTTATTTGTGGAGAC TERM 84 51060 - 51097 + FH 100 -21.5 -4.55295 | opp_overlap 51060 51059 CTATTATATCAAAAG GCTGTCCAGTGAGAATC CGAA GATTCTCACTGGACCGC TTTATTTGTGGAGAC TERM 85 51154 - 51178 + FH 84 -6.5 -5.0809 | opp_overlap 51154 ATTGGTAGCATCAAG CATTGTCTAGT AGT GTTAGGCAATG TTTTTGTAATTTCTT TERM 86 51336 - 51366 + FH 100 -12.8 -3.69323 | opp_overlap 51343, overlap 51339 ACTGGGGTATGATCG TCAGTAATCTGGTT CGG AACCAGATTACTAA TTTGAATCGTAATGC TERM 87 51339 - 51363 + FH 100 -14.5 -2.95116 | opp_overlap 51343, overlap 51336 GGGGTATGATCGTCA GTAATCTGGTT CGG AACCAGATTAC TAATTTGAATCGTAA TERM 88 51359 - 51343 - fH 72 -9.5 -3.15861 | opp_overlap 51339 51336 TATGATCGTCAGTAA TCTGGTT CGG AACCAGA TTACTAATTTGAATC LVIS_0046 51432 - 52124 + | hypothetical protein TERM 89 52294 - 52271 - g 91 -13.2 -3.40639 | gap 1 AATCTTACCAAGTAA TGGCTGACGCC TTA GGCGTC-GCCA AAGCTACGATTAGCT TERM 90 52388 - 52418 + G 70 -7.7 -3.91084 | gap 1 GGCGGAATTGCGGTC GTCGTTCGATGCTG ACGG CAGCATT-AGCGAC TTTAATTACCAATCA LVIS_0047 52189 - 53109 + | IS30 family transposase LVIS_0048 53135 - 54004 + | hypothetical protein TERM 91 54064 - 54040 - f 76 -7.9 -4.16943 | overlap 54044 GGGTAGATTGTAAAA TTAATCCGAAC GCT GTTCGGACAAA AAAGATCAGCTTCCT TERM 92 54060 - 54044 - f 84 -10.9 -3.68767 | overlap 54040 AGATTGTAAAATTAA TCCGAAC GCT GTTCGGA CAAAAAAGATCAGCT TERM 93 54122 - 54068 - f 100 -8.9 -5.24129 | gap 2, opp_overlap 54068 TGTTCGGACAAAAAA GATCAGCTTCCTTTAAAATGGTGTTTA CCA CAAAC-CCATCTTTTAGGA-GCTGATC TTTTGTCTAGTATAA TERM 94 54068 - 54122 + F 75 -6 -4.5954 | gap 2, opp_overlap 54068 TGTTCGGACAAAAAA GATCAGCTTCCTTTAAAATGGTGTTT ACCAC AAAC-CCATCTTTTAGGA-GCTGATC TTTTGTCTAGTATAA LVIS_0049 54125 - 55054 + | IS30 family transposase LVIS_0050 55099 - 55821 + | esterase/lipase TERM 95 55846 - 55879 + F 100 -19.9 -5.15969 | opp_overlap 55837 55834 TAAGTAGGCGCTTAA GTGGCGAGATAATTT AAAA AAATTATCTCGCCAC TTTTTTAGCTTCCCC LVIS_0051 55947 - 56891 + | ADP-ribosylglycohydrolase LVIS_0052 56891 - 57490 + | acetyltransferase LVIS_0053 57848 - 57534 - | hypothetical protein TERM 96 57590 - 57578 - G 80 -9.1 -4.27316 | opp_overlap 57575 57578 TGGCGTAAGTGAAAA GCCGT TCT ACGGC TGCTTGATTAGCCGG LVIS_0054 58460 - 57888 - | permease, cadmium resistance protein TERM 97 58344 - 58362 + g 73 -5.2 -4.58395 | overlap 58346 TTGTCCGGCGATAAT TTGCTGGC GCT GCTGGCGA TTTTTAGCGGCTAAC LVIS_0055 58549 - 58980 + | acetyltransferase TERM 98 58994 - 59015 + T 100 -8.7 -4.87893 | opp_overlap 58995, overlap 58995 AAAATCGTCAAAAAA ACCATCCTG TTAG CAGGATGGC TTTTTGGTTAAGCTT TERM 99 58995 - 59014 + T 91 -12.2 -3.51651 | opp_overlap 58995, overlap 58994 AAATCGTCAAAAAAA CCATCCTG TTAG CAGGATGG CTTTTTGGTTAAGCT TERM 100 59014 - 58995 - T 100 -12.2 -5.4477 | opp_overlap 58995 58994 AAATCGTCAAAAAAA CCATCCTG TTAG CAGGATGG CTTTTTGGTTAAGCT LVIS_0056 59535 - 59023 - | hypothetical protein TERM 101 59713 - 59739 + r 100 -11.7 -4.66163 | opp_overlap 59713 CTTGGGGATAAAAAA GATCACGACCA ATTAA TGGTTGTGATC TTTTTACATGCCGCT TERM 102 59739 - 59713 - R 100 -9.5 -5.24129 | opp_overlap 59713 CTTGGGGATAAAAAA GATCACGACCA ATTAA TGGTTGTGATC TTTTTACATGCCGCT LVIS_0057 61399 - 59759 - | ABC-type oligopeptide transport system, periplasmic component TERM 103 60947 - 60968 + g 70 -2.1 -4.93696 | overlap 60949 60951 GGATGGGGCCTTTTT TCCGGCCGC AATT GCGGTGGCA TTTTTGATGTTTGCG TERM 104 61545 - 61493 - H 80 -2.8 -5.4505 | gap 1, opp_overlap 61504, overlap 61504 61532 CCCCCTAAGAAAAAA GTAAACAAAAACCGCCCTTAACAGC CAAT GC-GTTAAGGACGGTTAACTTTTAA CCGCGGTACCACCTT TERM 105 61504 - 61534 + H 78 -10.5 -3.36823 | gap 1, opp_overlap 61493 61504 61532 AAAAGTAAACAAAAA CCGCCCTTAACAGC CAAT GC-GTTAAGGACGG TTAACTTTTAACCGC TERM 106 61534 - 61504 - H 100 -12.7 -5.43974 | gap 1, opp_overlap 61504, overlap 61493 61532 AAAAGTAAACAAAAA CCGCCCTTAACAGC CAAT GC-GTTAAGGACGG TTAACTTTTAACCGC TERM 107 62448 - 62464 + G 77 -2.9 -5.1861 | overlap 62451 TTGGTGACGACTTTT CAACGGT ATG GCCGTTA TTTTTTGATACTGGA TERM 108 62451 - 62461 + G 73 -4.6 -4.68456 | overlap 62448 GTGACGACTTTTCAA CGGT ATG GCCG TTATTTTTTGATACT LVIS_0058 62097 - 62732 + | transcriptional regulator TERM 109 62843 - 62823 - f 80 -9.9 -3.62032 | opp_overlap 62823 AGACTAAGGTCGAAA TTGAATGAA CCG TTCATTCAA TTTTAAACGTCGAAG TERM 110 62823 - 62843 + F 88 -9.9 -4.11216 | opp_overlap 62823 AGACTAAGGTCGAAA TTGAATGAA CCG TTCATTCAA TTTTAAACGTCGAAG LVIS_0059 62872 - 64146 + | hypothetical protein TERM 111 64145 - 64199 + T 100 -10.2 -4.8269 | gap 1, opp_overlap 64149, overlap 64149 64152 ATGTAAGTGCAGAAT AAAAGAAGATCGACCTTCACAGCGG GTAAAA CC-TTGCGAAGGTCGATCTTCTTAG TTTTTCGTCATTATG TERM 112 64195 - 64149 - T 100 -15.4 -4.78839 | gap 1, opp_overlap 64145 64149 64152 AAGTGCAGAATAAAA GAAGATCGACCTTCACAGCGG GTAAAA CCT-TGCGAAGGTCGATCTTC TTAGTTTTTCGTCAT TERM 113 64149 - 64195 + T 100 -15.4 -3.85504 | gap 1, opp_overlap 64149, overlap 64145 64152 AAGTGCAGAATAAAA GAAGATCGACCTTCACAGCGG GTAAAA CC-TTGCGAAGGTCGATCTTC TTAGTTTTTCGTCAT TERM 114 64152 - 64192 + T 100 -11.3 -4.03474 | gap 1, opp_overlap 64149, overlap 64149 64145 TGCAGAATAAAAGAA GATCGACCTTCACAGCGG GTAAAA CC-TTGCGAAGGTCGATC TTCTTAGTTTTTCGT LVIS_0060 65058 - 64210 - | membrane protease family stomatin/prohibitin-like protein TERM 115 64786 - 64807 + g 72 -5.9 -4.45399 | CCGGACCAGTTGGGC CATTGATTC GACC GAATCGGTG TTTTCATATTGGTAT LVIS_0061 65401 - 65072 - | hypothetical protein TERM 116 65429 - 65447 + r 83 -9 -4.13282 | CTGTTGATAGCTCTA TGATATCA CCG TGATATCA TTTTGGCAATCTAAT LVIS_0062 66236 - 65499 - | domain of unknown function (DUF1085) LVIS_0063 66549 - 67112 + | hypothetical protein TERM 117 67125 - 67153 + T 100 -15.4 -4.0616 | gap 1, opp_overlap 67125 TAATGAAACCAAAAA CGACCCG-GTTGC AGAT GCAACGCGGGTCG TTTGTCGTTAGCGTG TERM 118 67153 - 67125 - T 100 -15.4 -5.04222 | gap 1, opp_overlap 67125 TAATGAAACCAAAAA CGACCCG-GTTGC AGAT GCAACGCGGGTCG TTTGTCGTTAGCGTG TERM 119 67189 - 67218 + T 77 -8.5 -3.96387 | opp_overlap 67189 ACGACAAATAAAAAA CGTCGCAACTACT GATT GGTAGCGGCGACG TTTAGTTAGGTTAAT TERM 120 67218 - 67189 - T 100 -10 -5.73978 | opp_overlap 67189 ACGACAAATAAAAAA CGTCGCAACTAC TGATTG GTAGCGGCGACG TTTAGTTAGGTTAAT LVIS_0064 67732 - 67229 - | hypothetical protein TERM 121 67371 - 67360 - G 74 -4.4 -4.90217 | overlap 67351 TAAAGAGATTAAAAA TCCA AGTG TGGA GATACGTCAAGAAGA LVIS_0065 68184 - 67819 - | aromatic compounds catabolism protein LVIS_0066 68217 - 69038 + | naphthoate synthase LVIS_0067 69054 - 70487 + | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II TERM 122 70532 - 70496 - T 100 -11.6 -5.50723 | opp_overlap 70496 TGATTAAAAGAAAAA CGGTTCCTTCAGTGCG TTGTG CATTCTGAAGGAACCG TTCTTTAGTTGGTGA TERM 123 70496 - 70532 + T 100 -12.3 -4.10437 | opp_overlap 70496 TGATTAAAAGAAAAA CGGTTCCTTCAGTGCGT TGT GCATTCTGAAGGAACCG TTCTTTAGTTGGTGA LVIS_0068 71094 - 70552 - | hypothetical protein TERM 124 71456 - 71472 + G 86 -12.3 -3.5393 | opp_overlap 71454 ACACCACAACAAGTT GCCGCTA CGC TAGCGGC TTTGCCGACGATGGT LVIS_0069 71297 - 72241 + | hypothetical protein TERM 125 72231 - 72218 - T 100 -9.5 -4.68908 | TTTAGCCAAAAGAAA CGGCG TAAG CGCCG TCGTAAATAAGTTTA TERM 126 72285 - 72260 - T 100 -10.4 -5.43866 | opp_overlap 72260 TAATCGTCAAAAAAA CGCGTAGCCC AATTAA GGGTTACGCG TTTTTGGTTAAGCCG TERM 127 72260 - 72285 + T 100 -12.6 -4.8622 | opp_overlap 72260 TAATCGTCAAAAAAA CGCGTAGCCC AATTAA GGGTTACGCG TTTTTGGTTAAGCCG murE 73815 - 72301 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase LVIS_0071 75344 - 73836 - | lysyl-tRNA synthetase (class II) LVIS_0072 75558 - 76739 + | major facilitator superfamily permease TERM 128 76850 - 76805 - T 100 -15.1 -3.50393 | opp_overlap 76810 76846, overlap 76810 CTTGACCTCAGACAA TCAAAGGCAAGTGTCAAAA TTAGTCTT TTTTGACACTTGCCTTTTA CTGTCTAATGACGTA TERM 129 76845 - 76810 - T 100 -15 -4.04174 | opp_overlap 76810, overlap 76805 CCTCAGACAATCAAA GGCAAGTGTCAAAA TTAGTCTT TTTTGACACTTGCC TTTTACTGTCTAATG TERM 130 76810 - 76845 + T 100 -15 -4.40237 | opp_overlap 76810 76805 CCTCAGACAATCAAA GGCAAGTGTCAAAA TTAGTCTT TTTTGACACTTGCC TTTTACTGTCTAATG TERM 131 77082 - 77118 + T 100 -7.4 -5.63504 | gap 1 ATTGTTACGCCTTTC GTCGTTTTATC-AGGTC ATCT GGCCTTGATATGACGAC TTTTTTTGTGCAATT LVIS_0075 77758 - 77204 - | transcriptional regulator TERM 132 77461 - 77480 + g 83 -7.1 -4.70879 | ATTCAAACATTTGGG GGCTGTC GCGATA GGCAGCC TTTTTGGCGTTTGCA LVIS_0076 77866 - 78873 + | NADPH:quinone reductase related Zn-dependent oxidoreductase TERM 133 78951 - 78915 - f 100 -21.2 -3.51235 | opp_overlap 78915 TTATACAGAGGATAA TAGGATGGGATTCTCA CAGTT TGAGAATCCCATCCTA TTTTTGCGTTGCGTC TERM 134 78915 - 78951 + F 100 -21.2 -4.75174 | opp_overlap 78915 TTATACAGAGGATAA TAGGATGGGATTCTCA CAGTT TGAGAATCCCATCCTA TTTTTGCGTTGCGTC LVIS_0077 79144 - 79734 + | transcriptional regulator LVIS_0078 79928 - 81433 + | glutamate gamma-aminobutyrate antiporter LVIS_0079 81489 - 82928 + | glutamate decarboxylase TERM 135 84306 - 84282 - g 71 -7.1 -4.07687 | ACGGCCTTTCGAAAA CATGTTCAGGC ACT GCCTGTAGATG TCGCAACACCGGACT LVIS_0080 82989 - 84500 + | glutamyl- and glutaminyl-tRNA synthetase TERM 136 84533 - 84558 + F 91 -8.3 -4.66833 | opp_overlap 84521 84533, overlap 84524 CTATCCTCCTCAAAA GGAATTCGTCG TTAA TGGCGGATTCC TTTTTACAGTTGAGC LVIS_0081 84677 - 85591 + | hypothetical protein TERM 137 85604 - 85624 + F 95 -7.6 -5.05113 | gap 1, opp_overlap 85604 TAAATGGATTAGAGA GGAGTGTGG GTAA CCAC-CTCC TTTTATTTATGTAAA TERM 138 86135 - 86154 + F 70 -7.2 -3.79747 | overlap 86136 ATGAGCTTACTTAAG TTCTCATC ATAA GATGAGAG TTTGATCCTGGCTCA TERM 139 86344 - 86363 + F 76 -9.4 -3.5594 | opp_overlap 86344 AATACCGTATAACAA CAAAATCC GCAT GGATTTTG TTTGAAAGGTGGCTT TERM 140 86363 - 86344 - f 81 -9.4 -3.81848 | opp_overlap 86344 AATACCGTATAACAA CAAAATCC GCAT GGATTTTG TTTGAAAGGTGGCTT TERM 141 87756 - 87781 + F 79 -8.3 -4.08557 | TTGAAACAATGTTCA GTTTTGAGGGG CTTA CCTCTCTAAAC TTGTTCTTTGAAAAC TERM 142 90396 - 90380 - f 70 -5.1 -4.4715 | opp_overlap 90385, overlap 90384 GCTCAACGGATAAAA GCTACCC TGG GGATAAC AGGCTTATCTCCCCC TERM 143 91036 - 91060 + F 100 -15.1 -5.64274 | GTTGCCACGCGAGTT GTGGAACCCAG TGA TTGGGTTCCAC TTTTTTTGTAAATAA LVIS_0085 91250 - 92536 + | Na+/H+-dicarboxylate symporter TERM 144 92567 - 92540 - f 100 -15.7 -5.49568 | opp_overlap 92540 AAGGTAAAATAAAAA GAGCCGCCATT TTAACC AATGGCGGCTC TTTTTGAGTTCAAAC TERM 145 92540 - 92567 + F 100 -15.7 -4.74103 | opp_overlap 92540 AAGGTAAAATAAAAA GAGCCGCCATT TTAACC AATGGCGGCTC TTTTTGAGTTCAAAC TERM 146 93224 - 93199 - f 100 -8.3 -5.38054 | overlap 93183 GTGGATAAATAAAAA GCACTTAGCCA CAAC CAGCTAAGCGC ACCAAAAAAATTGTA LVIS_0086 93624 - 94187 + | peroxiredoxin TERM 147 94233 - 94267 + T 100 -12.3 -5.15634 | opp_overlap 94233 TTCAAACTTAAAAAA TCGGTCAATCCAGTA GTTCA TACTGAGTTGACCGA TTTTTTCATGAGGTG TERM 148 94267 - 94233 - T 100 -12.3 -5.22039 | opp_overlap 94233 TTCAAACTTAAAAAA TCGGTCAATCCAGTA GTTCA TACTGAGTTGACCGA TTTTTTCATGAGGTG LVIS_0087 94651 - 94304 - | hypothetical protein LVIS_0088 94814 - 95455 + | nucleoside-diphosphate-sugar epimerase LVIS_0089 95547 - 95810 + | hypothetical protein TERM 149 95825 - 95847 + T 100 -12.7 -5.58454 | opp_overlap 95825 GGTCGCTAATAAAAA GGTCGGCGC ATCAG GCGCTGACC TTTTTTTGATGTCGA TERM 150 95847 - 95825 - T 100 -10.5 -5.06414 | opp_overlap 95825 GGTCGCTAATAAAAA GGTCGGCGC ATCAG GCGCTGACC TTTTTTTGATGTCGA LVIS_0090 96329 - 96063 - | hypothetical protein LVIS_0091 96705 - 96391 - | XRE family transcriptional regulator LVIS_0092 97059 - 96853 - | hypothetical protein TERM 151 96985 - 96973 - G 77 -4.9 -4.89233 | CAGGAACATCAAAAA TGAAA CGA TTTCA ATGGTGATAATTGGC LVIS_0093 97710 - 97522 - | hypothetical protein TERM 152 97803 - 97849 + r 76 -11.1 -2.63901 | gap 1, opp_overlap 97808, overlap 97808 CCTGTGCGATACCAC AAAAACGCCGCTAACCACAT CAATAACA GTG-GGTTAGCGGCGTTTTG ATTACTTAATCGAGT TERM 153 97808 - 97844 + r 100 -11 -4.50193 | gap 1, opp_overlap 97808, overlap 97803 GCGATACCACAAAAA CGCCGCTAACCACAT CAATAACA GTG-GGTTAGCGGCG TTTTGATTACTTAAT TERM 154 97844 - 97808 - R 100 -10.3 -4.95155 | gap 1, opp_overlap 97808 97803 GCGATACCACAAAAA CGCCGCTAACC-AC ATCAATAACA GTGGGTTAGCGGCG TTTTGATTACTTAAT LVIS_0094 99319 - 97877 - | 6-phosphogluconate dehydrogenase LVIS_0095 99881 - 99453 - | transcriptional regulator LVIS_0096 99966 - 100406 + | acetyltransferase TERM 155 100492 - 100460 - T 100 -15 -5.67967 | opp_overlap 100460 ACTAGCATAAAAAAA GGGCCATCACCGAT TAAGT ATCGATGATGACCC TTTTAAAATTTAAAA TERM 156 100460 - 100492 + T 91 -10.6 -4.24002 | opp_overlap 100460 ACTAGCATAAAAAAA GGGCCATCACCGAT TAAGT ATCGATGATGACCC TTTTAAAATTTAAAA LVIS_0097 102003 - 100516 - | glucose-6-phosphate 1-dehydrogenase TERM 157 101293 - 101259 - G 81 -9.5 -4.011 | CTAACAGGGAAACAA TTTGCATGATATGGT TTTGG ACCATATCACGTAAA GCCCCACTGTTGTCG TERM 158 102267 - 102248 - H 74 -6.6 -4.3467 | opp_overlap 102251 102252, overlap 102252 ACGTTTACATCAAAA TTCATTTT CATG AAAATGAA AAACTTTTTGTAGAA LVIS_0098 102464 - 103288 + | aminoglycoside N3'-acetyltransferase TERM 159 103355 - 103301 - T 100 -19.6 -3.21593 | opp_overlap 103306, overlap 103302 103306 TAGTTTTGTAGAAGA TTAAAGAGGCACCATCACTAGTGG TTGATTT CTACTAGTGATGGCGCCTCTTTAT GGGACTAAGTTGTTA TERM 160 103354 - 103302 - T 100 -23.1 -2.52742 | opp_overlap 103306, overlap 103301 103306 AGTTTTGTAGAAGAT TAAAGAGGCACCATCACTAGTGG TTGATTT CTACTAGTGATGGCGCCTCTTTA TGGGACTAAGTTGTT TERM 161 103306 - 103350 + T 100 -19.5 -3.87994 | opp_overlap 103302 103301 103306 TTGTAGAAGATTAAA GAGGCACCATCACTAGTGG TTGATTT CTACTAGTGATGGCGCCTC TTTATGGGACTAAGT TERM 162 103350 - 103306 - T 100 -19.5 -3.97088 | opp_overlap 103306, overlap 103302 103301 TTGTAGAAGATTAAA GAGGCACCATCACTAGTGG TTGATTT CTACTAGTGATGGCGCCTC TTTATGGGACTAAGT LVIS_0099 104218 - 103376 - | Aryl-alcohol dehydrogenase related enzyme LVIS_0100 104458 - 105273 + | hypothetical protein TERM 163 105304 - 105336 + F 89 -6.2 -5.33405 | opp_overlap 105304 TAAATCAAAGCGAAA CGATCATACCAACC GGTTA GGAAGGGATGATCG TTTTTATTTGGTCAC LVIS_0101 105527 - 106693 + | major facilitator superfamily permease TERM 164 106701 - 106727 + F 84 -5.2 -5.37593 | opp_overlap 106703, overlap 106703 AAAAGTAGATTAAAA TGGATCAACC TGAAAAT GGTTGGTCTA TTTTTTAGTTTAACG TERM 165 106703 - 106725 + F 70 -5.6 -4.31698 | opp_overlap 106703, overlap 106701 AAGTAGATTAAAATG GATCAACC TGAAAAT GGTTGGTC TATTTTTTAGTTTAA LVIS_0102 106851 - 108197 + | glycerol-3-phosphatase transporter TERM 166 108257 - 108232 - T 100 -21.9 -4.32857 | opp_overlap 108232 CTTTGGAAACACAAA GCGTCCCGGGC GAGA GCCCGGGACGC TTTTACGTACTATTC TERM 167 108232 - 108257 + T 100 -21.9 -4.23723 | opp_overlap 108232 CTTTGGAAACACAAA GCGTCCCGGGC GAGA GCCCGGGACGC TTTTACGTACTATTC LVIS_0103 109013 - 108267 - | nitroreductase LVIS_0104 109483 - 109010 - | hypothetical protein TERM 168 109743 - 109770 + H 91 -7.1 -5.26316 | gap 1, overlap 109709 TATAGGTAAGCAGAG GGCGCCATTTCC AATTG GGAAATG-CGTC TTTTTTGTGCAATCA LVIS_0105 109814 - 111334 + | ABC transporter ATPase TERM 169 111502 - 111475 - g 74 -2.6 -5.0133 | gap 1 GAGTTGGCTAAAAAA GCGCGGGTGCAAG TTG CTCAC-CCCATGC TAGCGATGATGGGGA TERM 170 112784 - 112794 + G 74 -6.8 -4.43911 | CTTTCGTTAACGGGG CCCA CTA TGGG TTTTACTTCACGTTT LVIS_0106 111433 - 112866 + | major facilitator superfamily permease TERM 171 112902 - 112877 - f 85 -7.5 -4.8066 | opp_overlap 112877 AATAGAAGTTAAAAA GTGGTTGGGCT CTCT AGTCCAGCCAC TTTTTTGCTGGCGTA TERM 172 112877 - 112902 + F 100 -11.9 -5.15634 | opp_overlap 112877 AATAGAAGTTAAAAA GTGGTTGGGCT CTCT AGTCCAGCCAC TTTTTTGCTGGCGTA LVIS_0107 113035 - 113214 + | hypothetical protein TERM 173 113332 - 113357 + F 93 -13.5 -2.71144 | ATCCCGCGGTTTATA GTTTAGGTGTA TCGA TACACCTAAAC TAATTAAAGGAAGTG TERM 174 114068 - 114078 + G 71 -4.6 -4.56597 | CAGATCAATTGATGG GGCC TAT GGTC TTTTTGGCCAGCGCA LVIS_0108 113380 - 114153 + | Short-chain alcohol dehydrogenase TERM 175 114204 - 114168 - T 100 -18.2 -4.14056 | opp_overlap 114168 AGTTTAAACGACAAA CGGGTCCCTTCAGAAC GCACT GTTCTAAAAGGACCCG TTTTTAATTGGCTAA TERM 176 114168 - 114204 + T 100 -14.5 -4.88407 | opp_overlap 114168 AGTTTAAACGACAAA CGGGTCCCTTCAGAACG CAC TGTTCTAAAAGGACCCG TTTTTAATTGGCTAA LVIS_0109 115184 - 114216 - | transcriptional regulator TERM 177 114592 - 114607 + g 71 -8.2 -3.65425 | CCCGTGGCAGTGAGT CCGGCC AACC GGTCGG TTTGAGCTGTATGGG TERM 178 115067 - 115093 + g 79 -3.7 -5.2189 | gap 1, overlap 115071 TGGCAATGGTTTCTT TGATGCGTTGCT TGGT GGCGGCGC-TCA TTTTTTGGTAGTTCC TERM 179 115215 - 115236 + r 78 -10.1 -3.41234 | opp_overlap 115215 GGTTAGCATCAAAAA GCCCACTCC CAAA GGAGTGAGC TTGATTAGATTAGTC TERM 180 115236 - 115215 - R 100 -12.3 -4.77036 | opp_overlap 115215 GGTTAGCATCAAAAA GCCCACTCC CAAA GGAGTGAGC TTGATTAGATTAGTC LVIS_0110 116601 - 115246 - | hemolysin-like protein LVIS_0111 116809 - 117165 + | hypothetical protein TERM 181 117179 - 117207 + F 95 -6 -5.72207 | overlap 117182 AAAATAAATTTGGAA CCGGCGATAACG TAACT TGTTATCGCTAG TTTTTTTGATTTAAA TERM 182 117182 - 117204 + F 71 -8.5 -3.57012 | overlap 117179 ATAAATTTGGAACCG GCGATAACG TAACT TGTTATCGC TAGTTTTTTTGATTT TERM 183 117356 - 117330 - f 86 -6.7 -5.04222 | opp_overlap 117330 GAATTAAAGGAAAAA TTAGCACTC TAAATTGAT GAGTGCTAA TTACTTGCATTTATG LVIS_0112 117434 - 117859 + | molecular chaperone (small heat shock protein) TERM 184 117887 - 117908 + F 100 -13.7 -4.94487 | opp_overlap 117887 AGTCTACTGTGAAGA GTCCGGGGC AAAA GCCCTGGAC TTTTGTGTTTTCTGC TERM 185 117908 - 117887 - f 83 -11.5 -3.04263 | opp_overlap 117887 AGTCTACTGTGAAGA GTCCGGGGC AAAA GCCCTGGAC TTTTGTGTTTTCTGC TERM 186 118053 - 118042 - f 72 -7.2 -4.0056 | ATAAACATGTATAAA CCCG AAAC CGGG TATGAGTGAGGAGAA LVIS_0113 118073 - 119551 + | amino acid transporter TERM 187 119685 - 119633 - T 100 -17.5 -4.4648 | gap 1, opp_overlap 119639, overlap 119635 119639 ATTTTTATGATAAAA CACC-AATAGGCGCTTCAAAAATC ATCTAA GATTTTTGAAGCGCCTATTTAGTA TGGTCGGATTTAATA TERM 188 119682 - 119635 - T 100 -18.1 -3.84183 | opp_overlap 119639, overlap 119633 119639 TTTTATGATAAAACA CCAATAGGCGCTTCAAAAATC ATCTAA GATTTTTGAAGCGCCTATTTA GTATGGTCGGATTTA TERM 189 119678 - 119639 - T 100 -21.1 -3.58428 | opp_overlap 119639, overlap 119635 119633 ATGATAAAACACCAA TAGGCGCTTCAAAAATC ATCTAA GATTTTTGAAGCGCCTA TTTAGTATGGTCGGA TERM 190 119639 - 119678 + T 100 -21.1 -3.86202 | opp_overlap 119639 119635 119633 ATGATAAAACACCAA TAGGCGCTTCAAAAATC ATCTAA GATTTTTGAAGCGCCTA TTTAGTATGGTCGGA LVIS_0114 120543 - 119695 - | aldo/keto reductase LVIS_0115 120770 - 120612 - | hypothetical protein TERM 191 121329 - 121318 - g 80 -7.2 -4.55798 | TATCCGAAAGTAAAA GCCG GATT CGGC GAGCTGGTAAGATCG LVIS_0116 121008 - 123344 + | cation transport ATPase LVIS_0117 123433 - 123957 + | BS_ykrK family protein TERM 192 124002 - 123959 - T 100 -14.8 -2.80556 | opp_overlap 123964, overlap 123964 TTGAAAAGAAGTAAG TAAAAGCATCGTTAATCGCC AGTG AGCGGTTAACGATGCTTTTT GATATTGATTTATTG TERM 193 123997 - 123964 - T 100 -14.7 -4.52101 | opp_overlap 123964, overlap 123959 AAGAAGTAAGTAAAA GCATCGTTAATCGCC AGTG AGCGGTTAACGATGC TTTTTGATATTGATT TERM 194 123964 - 123997 + T 100 -16.2 -4.90136 | opp_overlap 123964 123959 AAGAAGTAAGTAAAA GCATCGTTAATCGC CAGTGA GCGGTTAACGATGC TTTTTGATATTGATT LVIS_0118 125805 - 124012 - | glycerophosphoryl diester phosphodiesterase TERM 195 125787 - 125768 - G 93 -7.1 -5.41143 | CAGTGCTGAAAAAAA TGACGGG TTGATT CCCGCCA GAACCGCCAAGCTTG TERM 196 125995 - 125985 - H 78 -4 -5.16237 | opp_overlap 125985 AACGGCAGGAAAAAA GTTT GTT AAAC TGTATGCGCTTACAT TERM 197 128321 - 128336 + G 74 -9 -3.65581 | overlap 128308 AACGCTAGCTGGGAT GGCGTT TGCC AACGCC TTCTTGGGGATTGAT LVIS_0119 126168 - 128786 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 198 128806 - 128834 + F 100 -12.6 -5.30616 | opp_overlap 128806 TTGGATAGGTAAAAA GGAATCACGATG GTTTA TATCGTGATTCC TTTTTGTTTAGATAG TERM 199 128834 - 128806 - f 100 -11.9 -4.70659 | opp_overlap 128806 TTGGATAGGTAAAAA GGAATCACGAT GGTTTAT ATCGTGATTCC TTTTTGTTTAGATAG LVIS_0120 129251 - 129826 + | aggregation promoting factor-like surface protein TERM 200 129899 - 129854 - f 70 -7.6 -3.6834 | opp_overlap 129862, overlap 129859 129862 AACAAAACGTTTAAA TTCAAGTAGGCACTATCGGA TGCAGG TCCGATAGTGCCTTTTTGCG TACGCTAGATTTGGC TERM 201 129894 - 129859 - f 78 -10.5 -3.28269 | opp_overlap 129862, overlap 129854 129862 AACGTTTAAATTCAA GTAGGCACTATCGGA TGCAGG TCCGATAGTGCCTTT TTGCGTACGCTAGAT TERM 202 129891 - 129862 - f 100 -16.6 -2.81888 | opp_overlap 129862, overlap 129859 129854 GTTTAAATTCAAGTA GGCACTATCGGA TGCAGG TCCGATAGTGCC TTTTTGCGTACGCTA TERM 203 129862 - 129891 + F 100 -17.3 -4.66609 | opp_overlap 129862 129859 129854 GTTTAAATTCAAGTA GGCACTATCGGAT GCAG GTCCGATAGTGCC TTTTTGCGTACGCTA TERM 204 130344 - 130320 - f 76 -7.9 -4.1721 | overlap 130324 AGGTAGATTGTAAAA TTAATCCGAAC GCT GTTCGGACAAA AAAGATCAGCTTCCT TERM 205 130340 - 130324 - f 84 -10.9 -3.68767 | overlap 130320 AGATTGTAAAATTAA TCCGAAC GCT GTTCGGA CAAAAAAGATCAGCT TERM 206 130402 - 130348 - f 100 -8.9 -5.24129 | gap 2, opp_overlap 130348 TGTTCGGACAAAAAA GATCAGCTTCCTTTAAAATGGTGTTTA CCA CAAAC-CCATCTTTTAGGA-GCTGATC TTTTGTCTAGTATAA TERM 207 130348 - 130402 + F 75 -6 -4.5954 | gap 2, opp_overlap 130348 TGTTCGGACAAAAAA GATCAGCTTCCTTTAAAATGGTGTTT ACCAC AAAC-CCATCTTTTAGGA-GCTGATC TTTTGTCTAGTATAA LVIS_0121 130405 - 131334 + | IS30 family transposase LVIS_0122 131376 - 134114 + | hypothetical protein TERM 208 134193 - 134158 - f 81 -5.4 -5.17786 | opp_overlap 134161, overlap 134159 134161 GAATAAAATCAAAAA TGAGCAGACCAATTCG GCGA CGAGTTGATCTGCTTT TTTGATGATTGAAGT TERM 209 134192 - 134159 - f 75 -8.9 -3.68231 | opp_overlap 134161, overlap 134158 134161 AATAAAATCAAAAAT GAGCAGACCAATTCG GCGA CGAGTTGATCTGCTT TTTTGATGATTGAAG TERM 210 134161 - 134190 + F 100 -11.5 -5.2189 | opp_overlap 134159 134158 134161 TAAAATCAAAAATGA GCAGACCAATTCG GCGA CGAGTTGATCTGC TTTTTTGATGATTGA TERM 211 134190 - 134161 - f 86 -11.5 -3.38208 | opp_overlap 134161, overlap 134159 134158 TAAAATCAAAAATGA GCAGACCAATTCG GCGA CGAGTTGATCTGC TTTTTTGATGATTGA LVIS_0123 134527 - 135177 + | aggregation promoting factor-like surface protein TERM 212 135216 - 135246 + F 100 -11.3 -4.13767 | gap 1, opp_overlap 135208 135216 AAAAATACACGGAAA CGACGGTTTAGTTC AAAT GAGCTAA-CCGTCG TTTTGACGTGGAAAA TERM 213 135246 - 135216 - f 78 -9.1 -3.81473 | gap 1, opp_overlap 135216, overlap 135208 AAAAATACACGGAAA CGACGGTTTAGTTC AAAT GAGCTA-ACCGTCG TTTTGACGTGGAAAA LVIS_0124 135400 - 135750 + | aggregation promoting factor-like surface protein TERM 214 135789 - 135758 - f 100 -11.7 -5.4505 | opp_overlap 135758 GGTTTTAATAAAAAA GGAGTGATTTCCA GGTAAT TGGAAATCGCTCC TTTTTTTGGCGGTTG TERM 215 135758 - 135789 + F 100 -14.6 -5.43866 | opp_overlap 135758 GGTTTTAATAAAAAA GGAGTGATTTCCAG GTAA TTGGAAATCGCTCC TTTTTTTGGCGGTTG TERM 216 136809 - 136819 + G 77 -8.2 -4.27796 | overlap 136795 TGCCCGTGAGCTGGT CGCC CAG GGCG TTTTGGACTTTATTC LVIS_0126 136381 - 136932 + | transcriptional regulator LVIS_0127 137065 - 137910 + | 5-keto-4-deoxyuronate isomerase TERM 217 138415 - 138429 + G 76 -11.4 -2.84325 | overlap 138412 138410 ACCGGCGTTTGTTAG CGGTCG GGG CGACCG TGGTCTTTGACCCAA LVIS_0128 137928 - 138908 + | 2-dehydro-3-deoxygluconokinase TERM 218 138915 - 138945 + F 100 -14.1 -4.77157 | gap 1 GAAGCGTGACTATCA GCCTGTCG-CAACG TTGT CGTTGCCGGCAGGC TTTTTAATAAGTTGA LVIS_0129 139032 - 140219 + | acetate kinase TERM 219 140235 - 140268 + F 71 -6.7 -4.15044 | overlap 140238 ACTAGATAACTGGAC CAATCGTGCCAGTGA GTGG TGATTGGCCCGGTTG TTTATTGGGGAACCG TERM 220 140409 - 140391 - f 75 -6 -4.68593 | TCGATTACGTAAAAA TCATGCCA GTT TGTCATGA AAATCGGATTACCTT LVIS_0130 140505 - 141002 + | hypothetical protein TERM 221 141042 - 141011 - T 100 -16.6 -4.06505 | opp_overlap 141011 TCAATAGATTAGAAA GCGCACCCCGAGAC AACT GTCTAAGGGTGCGC TTTTTATCGTGGTTA TERM 222 141011 - 141042 + T 100 -14.4 -4.94902 | opp_overlap 141011 TCAATAGATTAGAAA GCGCACCCCGAGAC AACT GTCTAAGGGTGCGC TTTTTATCGTGGTTA LVIS_0131 142677 - 141055 - | putative exporter of polyketide antibiotics LVIS_0132 143576 - 142683 - | ABC-type multidrug transport system, ATPase component TERM 223 144344 - 144327 - g 82 -5.5 -5.02476 | overlap 144338 ACAGCCGCTAAAAAA TTGGCTG AACA CCGCCAA CAAGTCATGCTTGAT LVIS_0133 143745 - 144401 + | HD superfamily hydrolase TERM 224 144391 - 144408 + T 100 -6.9 -5.66684 | opp_overlap 144389 144393 AAGCAGAATGGAACG CAGAGGC TTAG GCCCCTG TTTTTTTATGGCTTA LVIS_0134 145751 - 144414 - | Na+-driven multidrug efflux pump TERM 225 145820 - 145781 - R 100 -17.4 -3.32385 | opp_overlap 145781 145784, overlap 145784 AATACAGGATAGTAA TAATGGGGAACCACCG TCATACAC CGGTAGTTCCCCATTA TTCATTGAAAAATTT TERM 226 145781 - 145820 + r 100 -15.2 -3.35088 | opp_overlap 145781 145784, overlap 145784 AATACAGGATAGTAA TAATGGGGAACCACCG TCATACAC CGGTAGTTCCCCATTA TTCATTGAAAAATTT TERM 227 145784 - 145817 + r 100 -12.5 -3.81146 | opp_overlap 145781 145784, overlap 145781 ACAGGATAGTAATAA TGGGGAACCACCG TCATACAC CGGTAGTTCCCCA TTATTCATTGAAAAA TERM 228 145817 - 145784 - R 100 -14.7 -3.7918 | opp_overlap 145784 145781, overlap 145781 ACAGGATAGTAATAA TGGGGAACCACCG TCATACAC CGGTAGTTCCCCA TTATTCATTGAAAAA LVIS_0135 147277 - 145850 - | glucuronate isomerase LVIS_0136 148768 - 147350 - | Na+/xyloside symporter related transporter TERM 229 147650 - 147673 + g 73 -9.6 -3.30741 | opp_overlap 147648 CCCGTAAACGATACC GTCTTCACGG ACAC CCGTTAAGAC TTCATGGTTATCAAT TERM 230 148947 - 148937 - H 78 -5.4 -5.06735 | GATAAATGACAAAAA TCAC GAA GTGA AATAAAATTGGCTTT LVIS_0137 149127 - 151622 + | alpha-glucosidase LVIS_0138 151719 - 153530 + | beta-D-glucuronidase TERM 231 153578 - 153535 - f 70 -9.6 -2.80016 | opp_overlap 153540, overlap 153534 ATAAAAAATAGTAAT GGTAAGTGGGCATCATCCGC AACA GCGGATAATACCCACTTTTT GTTGTGCTGATAAGC TERM 232 153540 - 153573 + F 100 -13.9 -5.22006 | opp_overlap 153535 153534 AAATAGTAATGGTAA GTGGGCATCATCCGC AACA GCGGATAATACCCAC TTTTTGTTGTGCTGA LVIS_0139 153959 - 155596 + | fructuronate reductase LVIS_0140 155614 - 156492 + | galactose mutarotase-like protein LVIS_0141 156513 - 157175 + | phosphoglycerate mutase family protein TERM 233 157807 - 157791 - g 74 -10.9 -2.93073 | opp_overlap 157794, overlap 157794 CTGGTTGAAGAATCA CAACGTG CAA CACGTTG ACTTGGATACGCTCT LVIS_0142 157210 - 158202 + | 2-hydroxyacid dehydrogenase TERM 234 158216 - 158251 + F 70 -7.7 -3.68351 | gap 1, opp_overlap 158216, overlap 158221 AACGATGAGTTTAAA CAGAACCATGTGCGCG TGAAT TG-GCACGTGGTTTTG TTTAGCTAATCAAGC TERM 235 158221 - 158246 + F 74 -4 -4.9138 | gap 1, opp_overlap 158216, overlap 158216 TGAGTTTAAACAGAA CCATGTGCGCG TGAAT TG-GCACGTGG TTTTGTTTAGCTAAT LVIS_0143 158298 - 159839 + | gluconate kinase TERM 236 159925 - 159969 + F 76 -9.4 -3.44051 | opp_overlap 159932, overlap 159930 AGCTGGAACGTACCG GACACGACTTTAAGTCAAGT AGCCC GCTTGTCTTAAAGTCTGGTC TTATCCTACTAAGGA TERM 237 159930 - 159964 + F 77 -10.9 -2.8214 | opp_overlap 159932, overlap 159925 GAACGTACCGGACAC GACTTTAAGTCAAGT AGCCC GCTTGTCTTAAAGTC TGGTCTTATCCTACT TERM 238 160024 - 160046 + F 100 -14.2 -3.33573 | overlap 160016 CCGCTTTTTGTTGGG CTAGTGTGGC ATG GCCACGCTAG TTAATGATTATTGCT LVIS_0144 160348 - 161250 + | 6-phosphogluconate dehydrogenase-like protein TERM 239 161302 - 161277 - f 91 -11.9 -3.47322 | opp_overlap 161277 TTTGATTATAACGAA GGGCGGTACTA TATT TAGTACGGCCC TTTTTTCTTGGATTA TERM 240 161277 - 161302 + F 100 -11.9 -5.5074 | opp_overlap 161277 TTTGATTATAACGAA GGGCGGTACTA TATT TAGTACGGCCC TTTTTTCTTGGATTA LVIS_0145 161393 - 162094 + | transcriptional regulator LVIS_0146 162127 - 163197 + | mannonate dehydratase TERM 241 164236 - 164214 - g 77 -4.8 -4.8667 | overlap 164216 GACAGTGCAGAAAAA GTGACGAAAA AAA TTATCGTCCC AACCTTGATTGTCCG LVIS_0147 163272 - 164279 + | catabolite control protein A TERM 242 164264 - 164283 + F 100 -8 -5.75342 | opp_overlap 164267 164282 CCGGGATTCTGTGAA GGATTTAA GAAA TTAAATCC TTTTTTTTGCAAAAA TERM 243 165410 - 165424 + G 71 -8.6 -3.64487 | opp_overlap 165410 165408 ACAACTTAGGTAATA TTGGCT TGC AGCCAA TTGTTAACGCTATCA LVIS_0148 164515 - 165993 + | Na+/xyloside symporter related transporter TERM 244 167534 - 167509 - g 74 -4.1 -4.87803 | gap 1, overlap 167510 167515 GATCTTGAAAGAAAA CCAAG-ACTTGT ATG ACAAGTACCTGA ACATTCACATCGCAG LVIS_0149 166049 - 167629 + | hypothetical protein TERM 245 167649 - 167619 - f 78 -5.6 -4.90869 | opp_overlap 167623 167624 AGTACGAACCAAAAA TCAACGAATAATCA CGA TGATTCTTCATTAA TTAAGGAGGACAAGA LVIS_0150 167668 - 169128 + | glucuronate isomerase TERM 246 169145 - 169187 + T 100 -10.8 -5.15969 | gap 1, opp_overlap 169145 TGGTGATTGCATGAA GGTATTGTCTAGCCACAGC CGGTGA GCT-TGGTTGGACGATACC TTTTTTGGATTAAAA TERM 247 169205 - 169251 + T 74 -10 -3.13164 | opp_overlap 169205 169204, overlap 169239 TTTTGGATTAAAAAT GCTGCGCCTTCCAGACGCGGGT CTC ATGCGAGTCTTGGAGGCGCGCC TTCGATCCTTGAAAC LVIS_0151 170283 - 169363 - | IS30 family transposase TERM 248 170084 - 170054 - G 70 -7.7 -3.91084 | gap 1 TGATTGGTAATTAAA GTCGCT-AATGCTG CCGT CAGCATCGAACGAC GACCGCAATTCCGCC TERM 249 170178 - 170201 + g 91 -13.2 -3.40639 | gap 1 AGCTAATCGTAGCTT TGGC-GACGCC TAA GGCGTCAGCCA TTACTTGGTAAGATT LVIS_0152 170477 - 171718 + | NRPS condensation (elongation) domain-containing protein TERM 250 171740 - 171772 + T 70 -7.6 -3.70076 | opp_overlap 171741, overlap 171741 TGGCAGTCTAAAAAA AGCCCCTTCGTCAT TAGTC GTGACGGTGGGGCC TTTCAGTAGCTTTCA TERM 251 171741 - 171771 + T 77 -11.1 -2.81564 | opp_overlap 171741, overlap 171740 GGCAGTCTAAAAAAA GCCCCTTCGTCAT TAGTC GTGACGGTGGGGC CTTTCAGTAGCTTTC TERM 252 171771 - 171741 - T 100 -8.2 -5.44119 | opp_overlap 171741 171740 GGCAGTCTAAAAAAA GCCCCTTCGTCA TTAGTCG TGACGGTGGGGC CTTTCAGTAGCTTTC LVIS_0153 171971 - 171789 - | hypothetical protein LVIS_0154 172214 - 173608 + | major facilitator superfamily permease TERM 253 173639 - 173697 + T 100 -12.2 -4.66163 | gap 2, opp_overlap 173641 173651 173654, overlap 173644 173651 173654 ACGTTTTGGAAAAGT G-A-TCACCATAAATAAGGGTTCAGGAC AAATG GTTCTGAACCCTTATTTGTGGTTAATAC TTTTTAAGTCGGGAT TERM 254 173693 - 173641 - T 100 -16.6 -2.74605 | opp_overlap 173639 173644 173651 173654, overlap 173651 173654 GTTTTGGAAAAGTGA TCACCATAAATAAGGGTTCAGGAC AAATG GTTCTGAACCCTTATTTGTGGTTA ATACTTTTTAAGTCG TERM 255 173644 - 173690 + T 100 -22.7 -3.4158 | opp_overlap 173641 173651 173654, overlap 173639 173651 173654 TTGGAAAAGTGATCA CCATAAATAAGGGTTCAGGAC AAATG GTTCTGAACCCTTATTTGTGG TTAATACTTTTTAAG TERM 256 173651 - 173683 + T 100 -15.8 -4.08546 | opp_overlap 173641 173651 173654, overlap 173644 173639 173654 AGTGATCACCATAAA TAAGGGTTCAGGAC AAATG GTTCTGAACCCTTA TTTGTGGTTAATACT TERM 257 173683 - 173651 - T 100 -13.6 -3.99592 | opp_overlap 173651 173644 173639 173654, overlap 173641 173654 AGTGATCACCATAAA TAAGGGTTCAGGAC AAATG GTTCTGAACCCTTA TTTGTGGTTAATACT TERM 258 173654 - 173680 + T 100 -13.1 -4.15832 | opp_overlap 173651 173641 173654, overlap 173651 173644 173639 GATCACCATAAATAA GGGTTCAGGAC AAATG GTTCTGAACCC TTATTTGTGGTTAAT TERM 259 173680 - 173654 - T 93 -10.9 -4.12254 | opp_overlap 173654 173651 173644 173639, overlap 173651 173641 GATCACCATAAATAA GGGTTCAGGAC AAATG GTTCTGAACCC TTATTTGTGGTTAAT LVIS_0155 174218 - 173796 - | hypothetical protein TERM 260 174677 - 174709 + r 100 -15.1 -5.1101 | opp_overlap 174677 ATAGCATAACTTAAA CAGGCCATTAAAC TGTCAGC GTTTAATGGCCTG TTTTTTGCGTGCTAA TERM 261 174709 - 174677 - R 100 -15.1 -3.82484 | opp_overlap 174677 ATAGCATAACTTAAA CAGGCCATTAAAC TGTCAGC GTTTAATGGCCTG TTTTTTGCGTGCTAA LVIS_0157 175524 - 174721 - | hypothetical protein LVIS_0158 176031 - 175528 - | hypothetical protein TERM 262 175955 - 175966 + g 71 -3 -4.83615 | AATTCGTATTGCTTG TAAG GAAT CTTA TTTTTATCGAGAATC LVIS_0159 176176 - 176901 + | transcriptional regulator TERM 263 176912 - 176941 + F 95 -11.5 -3.75629 | opp_overlap 176912 AATAGACGTGAGAAA GGGATGATCGG GCAAATCG CCGGTCATCCC TTTAAATTAACCCTA TERM 264 176941 - 176912 - f 83 -9.3 -3.9226 | gap 1, opp_overlap 176912 AATAGACGTGAGAAA GGGATGATCGGGCA AAT CGCCGG-TCATCCC TTTAAATTAACCCTA LVIS_0160 177024 - 177695 + | Zn-dependent protease TERM 265 177747 - 177701 - T 90 -11.7 -3.70925 | gap 1, opp_overlap 177711, overlap 177697 177711 TTATCAATAAACTAA TTGCAGATAACGCGCCTGGGAC AACG GCCCCAGACGCGTT-TCTTTAA TGGTATACTAAGGCT TERM 266 177711 - 177738 + T 100 -12.6 -4.52345 | opp_overlap 177701 177697 177711 ACTAATTGCAGATAA CGCGCCTGGGAC AACG GCCCCAGACGCG TTTCTTTAATGGTAT TERM 267 177738 - 177711 - T 100 -17 -3.52459 | opp_overlap 177711, overlap 177701 177697 ACTAATTGCAGATAA CGCGCCTGGGAC AACG GCCCCAGACGCG TTTCTTTAATGGTAT greA 178249 - 177767 - | transcription elongation factor GreA LVIS_0162 178323 - 178745 + | hypothetical protein TERM 268 178734 - 178754 + F 100 -10.5 -4.8543 | CTAACATATTCGTTA CGGCACAAT TAA ATTGTGCTG TTTTTCTCGGCATTA TERM 269 178771 - 178786 + F 72 -7.6 -3.90729 | overlap 178760 TTTTCTCGGCATTAT CGTCTA AAAA TAGACG TTTGTGCCAGTTATT TERM 270 179120 - 179143 + F 100 -8.9 -5.47218 | opp_overlap 179119 ATTTGCTTAGAAAGG GGAGCTACC ATGGGG GGTAGTTCC TTTTTTTCGGTGGGA LVIS_0163 179251 - 180006 + | response regulator LVIS_0164 180021 - 181355 + | signal transduction protein TERM 271 181746 - 181756 + G 71 -4 -4.74103 | AGTTGAGCTGGTGAT TAAC AAT GTTA TTTTTGCGTTAGCAG TERM 272 182489 - 182479 - g 71 -6.8 -4.24002 | opp_overlap 182479 182478 CGGGAAACGGCAAAA CAGC TTC GCTG GTTATTGACCTTTCC LVIS_0165 181342 - 182673 + | signal transduction protein TERM 273 183038 - 183057 + F 100 -6.4 -5.71983 | TGATGCTAGTGGGAA CCGGAG AGTGGTTA CTCCGG TTTTTTTGTGGTTCC TERM 274 183270 - 183289 + G 77 -6.4 -4.63218 | overlap 183272 GGTGTTAAGGGAATT GGCTTAGC AACG GCTAAGGC TTTTGTTCAGGAAGG LVIS_0166 183216 - 183956 + | 3-oxoacyl-acyl carrier protein reductase TERM 275 183999 - 183976 - T 88 -9.5 -4.31688 | opp_overlap 183976 AATAGCAATCCAAAA GGCGCGGGA CTAATC TCTCGCGCC TTTAACTATTTAATT TERM 276 183976 - 183999 + T 95 -11.7 -3.82811 | opp_overlap 183976 AATAGCAATCCAAAA GGCGCGGGA CTAATC TCTCGCGCC TTTAACTATTTAATT LVIS_0167 184094 - 184005 - | hypothetical protein LVIS_0168 185074 - 184187 - | pseudouridylate synthase, 23S RNA-specific TERM 277 184833 - 184819 - G 73 -5.6 -4.55287 | overlap 184803 184821 CCGATTCATACAAAA CGGCCA CCG TGGCGG CACTATCGGGATCAA TERM 278 185151 - 185125 - R 100 -16.7 -4.46212 | opp_overlap 185122 185120 185119 185150 CGTGTGAGCATAAAA TAAGGCCGGGA GCTGG TCCCGGCCTTA ACGTACTTATTCGTT LVIS_0169 185620 - 185165 - | UspA family nucleotide-binding protein LVIS_0173 187827 - 188156 + | transcriptional regulator AcrR TERM 279 188184 - 188207 + T 78 -6 -4.82154 | gap 1, opp_overlap 188184 188186 GAGAACGCAAAAAAA CACCGAG-CCT CAC GGGATTCGGTG TTTTTGGTGTGGCTT TERM 280 188207 - 188184 - T 87 -4.5 -5.55698 | opp_overlap 188184, overlap 188186 GAGAACGCAAAAAAA CACCGAGCC TCACGG GATTCGGTG TTTTTGGTGTGGCTT LVIS_0174 190029 - 188221 - | ABC-type oligopeptide transport system, periplasmic component LVIS_0175 191100 - 190150 - | ABC-type dipeptide/oligopeptide/nickel transport system, permease component TERM 281 190809 - 190791 - G 73 -9.6 -3.32844 | opp_overlap 190783 TTCGTGAGCCGACAA TCAGCTGC TTG GCAACTGA ACGACCACCGGAATC LVIS_0176 192075 - 191116 - | ABC-type dipeptide/oligopeptide/nickel transport system, permease component LVIS_0177 193049 - 192075 - | ABC-type oligopeptide transport system, ATPase component LVIS_0178 194059 - 193046 - | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component LVIS_0179 194498 - 194962 + | transcriptional regulator TERM 282 195081 - 195105 + F 100 -10.6 -5.09895 | TTAATGTCGTTGGAA GCCGCCCGGG GTGAA CCTGGACGGC TTTTTTCGATCAATA TERM 283 195373 - 195363 - g 85 -5.4 -5.3321 | opp_overlap 195365 195366 AATGAACAACAAAAA GTTC GAT GAAC CATTGGTATTGTTTT LVIS_0180 195286 - 196299 + | lipoate-protein ligase A TERM 284 196394 - 196372 - f 100 -13.5 -3.25802 | opp_overlap 196372 GAGGAAATTGACTAA GACGTGGTC GGTTT GACCACGTC TTTTATTTTAGAAAT TERM 285 196372 - 196394 + F 100 -14.2 -5.08255 | opp_overlap 196372 GAGGAAATTGACTAA GACGTGGTCG GTT TGACCACGTC TTTTATTTTAGAAAT LVIS_0181 196431 - 196850 + | hypothetical protein TERM 286 196974 - 196990 + G 75 -7.9 -4.24342 | opp_overlap 196974 AGCCGGACCAAACGA TGGCGCC ACT GGCGGCA TTTATTCGTGAACAA LVIS_0182 196865 - 197344 + | hypothetical protein TERM 287 197564 - 197594 + F 100 -18.4 -5.47218 | opp_overlap 197564 GAGTGCTGTATGAAA GCGTCCAAGCAGTC TTT GACTGGTTGGACGC TTTTTTTGCGTAAAA TERM 288 197594 - 197564 - f 100 -18.4 -3.72893 | opp_overlap 197564 GAGTGCTGTATGAAA GCGTCCAAGCAGTC TTT GACTGGTTGGACGC TTTTTTTGCGTAAAA TERM 289 199282 - 199259 - g 73 -9.6 -3.36327 | TTACGCTATCGACAA GCCACAATCA GAAT TGATCGCGGC AACGCATTCTGATCA LVIS_0183 198006 - 199355 + | xylose isomerase TERM 290 199424 - 199396 - f 76 -10.2 -2.91342 | opp_overlap 199397, overlap 199395 AATTAACCATGAAAT TGGCGGACGGAC GGTGT GTTCGTCCGCCT TTTTTAAACCGAAAA TERM 291 199397 - 199423 + F 100 -16.6 -5.00616 | opp_overlap 199396 199395 ATTAACCATGAAATT GGCGGACGGACG GTG TGTTCGTCCGCC TTTTTTAAACCGAAA TERM 292 200185 - 200205 + G 72 -10.3 -3.05775 | overlap 200184 GCGGCGGATAATGCC GCCGGGGCC GTT GGTGCCGGC ATTTTGCACCCTAAT LVIS_0184 199459 - 200967 + | xylulose kinase TERM 293 200974 - 201005 + F 100 -12.4 -5.26875 | gap 1, opp_overlap 200974 GAGCTTTAGACTAAA TCACCGGCAA-CCCC AAG GGGGATTGTTGGTGA TTTTTTGATTACCCA TERM 294 201005 - 200974 - f 81 -9.4 -3.83502 | opp_overlap 200974 GAGCTTTAGACTAAA TCACCGGCAACCCC AAGG GGGATTGTTGGTGA TTTTTTGATTACCCA TERM 295 201037 - 201026 - f 75 -3 -5.1101 | opp_overlap 201034 TGATTACCCAAAAAA GAAA ACGG TTTC AAAAAGCTTGTGAAA LVIS_0185 201179 - 201298 + | hypothetical protein LVIS_0186 201334 - 202551 + | D-xylose proton-symporter LVIS_0187 202719 - 203498 + | acetoin reductase TERM 296 203555 - 203519 - f 100 -12.3 -3.91905 | opp_overlap 203523, overlap 203514 203523 CATAATTAAACACAA TGAAGGGCCTATCCGCT ACT AGTGGATAGGCCCTTTT AGCTGGAATATAGGA TERM 297 203523 - 203551 + F 100 -19.7 -4.19258 | opp_overlap 203519 203514 203523 ATTAAACACAATGAA GGGCCTATCCGCT ACT AGTGGATAGGCCC TTTTAGCTGGAATAT TERM 298 203551 - 203523 - f 100 -17.5 -3.59031 | opp_overlap 203523, overlap 203519 203514 ATTAAACACAATGAA GGGCCTATCCGCT ACT AGTGGATAGGCCC TTTTAGCTGGAATAT TERM 299 203608 - 203573 - f 100 -16.4 -2.92175 | opp_overlap 203575 203580, overlap 203580 CTGGAATATAGGATA CAAAAAATGGTCGTCA GTAA CGACGACCATTTTCTG GTTGGAAGAATTGAA TERM 300 203575 - 203606 + F 74 -10.3 -2.71681 | opp_overlap 203573 203580, overlap 203580 GGAATATAGGATACA AAAAATGGTCGTC AGTAAC GACGACCATTTTC TGGTTGGAAGAATTG TERM 301 203580 - 203601 + F 100 -10.2 -4.5442 | opp_overlap 203573 203580, overlap 203575 ATAGGATACAAAAAA TGGTCGTC AGTAAC GACGACCA TTTTCTGGTTGGAAG TERM 302 203601 - 203580 - f 100 -10.9 -5.40625 | opp_overlap 203580 203575, overlap 203573 ATAGGATACAAAAAA TGGTCGTCA GTAA CGACGACCA TTTTCTGGTTGGAAG LVIS_0188 203836 - 204210 + | hypothetical protein TERM 303 205038 - 205028 - g 83 -8.2 -4.63527 | overlap 205008 205007 TGAGTATGCTAAAAA CGCC CAA GGCG AGTGCCGGATTATCG LVIS_0189 204235 - 206796 + | hypothetical protein TERM 304 206810 - 206849 + T 100 -16 -4.82667 | opp_overlap 206810 AAATAGCAAAGTAAA GACCACAACTAGTAGAAT GTGA ATTCTATCAGTTGTGGTC TTTTTAGTATGCTAG TERM 305 206849 - 206810 - T 100 -16 -4.15249 | opp_overlap 206810 AAATAGCAAAGTAAA GACCACAACTAGTAGAAT GTGA ATTCTATCAGTTGTGGTC TTTTTAGTATGCTAG LVIS_0190 207390 - 206869 - | UspA family nucleotide-binding protein LVIS_0191 207920 - 207411 - | phospholipid-binding protein TERM 306 207774 - 207787 + g 93 -6.7 -5.41746 | ATCAATGAGGTTCAG CGCAA TGGT TTGCG TTTTTTTAGGCAATT LVIS_0192 208115 - 209287 + | acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein TERM 307 209893 - 209904 + G 71 -7.2 -4.08945 | opp_overlap 209892 GTATGGGGATGAGAC GCCG CACA CGGC TTTTGGAAAAATCAT LVIS_0193 209378 - 210133 + | Kef-type K+ transporter NAD-binding component TERM 308 210182 - 210138 - f 100 -21 -5.67283 | gap 1, opp_overlap 210138 210141 AATCTAAATAAAAAA TAACAGCGGCCCTAGTAGCAT CGTC ATGCTACG-GGGCCGCTGTTA TCAATTAAGGCTCTA TERM 309 210138 - 210182 + F 100 -23.2 -2.53581 | gap 1, opp_overlap 210138, overlap 210141 AATCTAAATAAAAAA TAACAGCGGCCCTAGTAGCAT CGTC ATGCTAC-GGGGCCGCTGTTA TCAATTAAGGCTCTA TERM 310 210141 - 210179 + F 100 -20.5 -3.42056 | gap 1, opp_overlap 210138, overlap 210138 CTAAATAAAAAATAA CAGCGGCCCTAGTAGCAT CGTC ATGCTAC-GGGGCCGCTG TTATCAATTAAGGCT TERM 311 210206 - 210234 + F 100 -14.7 -5.40072 | GGCTCTATGATATTT GGTGTTGATGGAT AAA ATCCATCGACGCC TTTTTTTCAAAACAA TERM 312 210270 - 210258 - f 100 -9.1 -5.70761 | opp_overlap 210258 AAAACAAAATAAAAA GGGCA TAC TGCCC TGTGCTACAATCAAG TERM 313 210333 - 210343 + F 70 -5.4 -4.43309 | opp_overlap 210330 210333 TATGTCCCAAGACCA GTCT ACT AGAC TTTTACTTCAAATTA TERM 314 210393 - 210415 + F 75 -8.4 -3.89903 | opp_overlap 210399 210400, overlap 210394 210413 TTTGCGTGTTAGTGA TACTAAGCGC GAT GCGCTTAGAG TTTATGGAACTCTTT TERM 315 210394 - 210414 + F 73 -9.7 -2.93219 | opp_overlap 210399 210400, overlap 210393 210413 TTGCGTGTTAGTGAT ACTAAGCGC GAT GCGCTTAGA GTTTATGGAACTCTT TERM 316 211107 - 211091 - g 77 -6.6 -4.4959 | overlap 211106 TCCAATTAATGAAAA GGTATC ACCCA GATACC CCCGAATACCGGGTG LVIS_0194 210679 - 211581 + | transposase TERM 317 211591 - 211562 - T 100 -10.8 -4.97158 | overlap 211557 TCAGAGTAAAGAAAA GGAACCCCGTTC GCAAGT GAACGAAGTTCC ACATAAATCCTCCAT LVIS_0195 212256 - 211633 - | hypothetical protein TERM 318 212320 - 212293 - H 82 -5.6 -5.01732 | overlap 212296 AACGGTGTGAAAAAA CAAGTTTGTCGT TTTA ACGACAAACTAT CACACTCCTCATGAT TERM 319 212317 - 212296 - H 100 -11.7 -4.61482 | overlap 212293 GGTGTGAAAAAACAA GTTTGTCGT TTTA ACGACAAAC TATCACACTCCTCAT LVIS_0196 212444 - 213325 + | aldo/keto reductase LVIS_0197 213716 - 213327 - | hypothetical protein TERM 320 213488 - 213512 + g 100 -10.8 -5.06451 | TAGGAATTAATGGGA CTAGGTCTTC TTTGT GGAGACCTAG TTTTTTGGCGTAGTA TERM 321 213692 - 213704 + g 77 -4.8 -4.9725 | opp_overlap 213689 GTACCACTGAAACGC CAGC CCAGC GCTG TTTTTGTGTCAAAAT LVIS_0198 213886 - 214419 + | acetyltransferase TERM 322 214745 - 214713 - f 100 -12 -4.13767 | opp_overlap 214713 CGGTTTAGTCTAAAA TCGTCCCTGTTGCA GAAGA TGCAGCAGGGGCGA TTTTTTTGTACATAA TERM 323 214713 - 214745 + F 100 -16.4 -5.64274 | opp_overlap 214713 CGGTTTAGTCTAAAA TCGTCCCTGTTGCA GAAGA TGCAGCAGGGGCGA TTTTTTTGTACATAA TERM 324 215000 - 215025 + G 73 -7.7 -4.02049 | opp_overlap 215005 215006, overlap 215006 CATTATTGACGGGAT TAAAACTGGGA TTAT TCCCATTTTTA TCTTTTTACTGATTG TERM 325 215006 - 215019 + G 93 -6.7 -5.36364 | opp_overlap 215006 215005, overlap 215000 TGACGGGATTAAAAC TGGGA TTAT TCCCA TTTTTATCTTTTTAC LVIS_0199 214785 - 216227 + | Na+/H+ antiporter TERM 326 216265 - 216286 + F 100 -9.3 -4.80959 | AATAGAATCAGTTAG GGTCGGGCC TTTG GGCACGGCC TTTTCTTATGGATTC LVIS_0200 216481 - 217554 + | AEC family permease LVIS_0201 217574 - 218575 + | lactate dehydrogenase TERM 327 218598 - 218623 + F 89 -7.5 -5.00616 | opp_overlap 218598 AGCGTGAGACAACAA GAGCTCGGGAC TTTT GTCTCGGACTC TTTTTTGCCGCGGGC TERM 328 218849 - 218890 + G 84 -13.1 -3.18582 | GACGAATTCTGCGGG TGGCCCGTTCGACTGCC AAAATGCC GGCAGTTAAACGGGTCA TTCGTGCCTCCAATG LVIS_0202 218695 - 220287 + | Signal transduction histidine kinase regulating citrate/malate metabolism LVIS_0203 220284 - 221000 + | response regulator of citrate/malate metabolism TERM 329 221052 - 221007 - T 91 -12.8 -2.66979 | opp_overlap 221012 221045, overlap 221012 TTAACATGAACGAAC CAAAATGGACCTGTCAGAAG ACTTAA CTTCTAGCAGGTCCATTTTT ATAATGGCTATTAGT TERM 330 221047 - 221012 - T 100 -12.7 -4.50193 | opp_overlap 221012 221045, overlap 221007 ATGAACGAACCAAAA TGGACCTGTCAGAAG ACTTAA CTTCTAGCAGGTCCA TTTTTATAATGGCTA TERM 331 221012 - 221047 + T 100 -12.7 -4.9218 | opp_overlap 221007 221012, overlap 221045 ATGAACGAACCAAAA TGGACCTGTCAGAAG ACTTAA CTTCTAGCAGGTCCA TTTTTATAATGGCTA LVIS_0204 222397 - 221063 - | hypothetical protein LVIS_0205 222484 - 223062 + | transcriptional regulator TERM 332 223118 - 223073 - T 100 -14.3 -3.19038 | opp_overlap 223077 223082, overlap 223082 TTTAAAATGAGCCAA TAAAAAAAACTCGCTAGGTGC TAAT GCACGTAACGAGTTTTGTTTA AGCGGAACGCTACCC TERM 333 223077 - 223114 + T 71 -8.5 -3.53091 | opp_overlap 223073 223082, overlap 223082 AAATGAGCCAATAAA AAAAACTCGCTAGGTGC TAAT GCACGTAACGAGTTTTG TTTAAGCGGAACGCT TERM 334 223082 - 223109 + T 100 -8.4 -4.86731 | opp_overlap 223073 223082, overlap 223077 AGCCAATAAAAAAAA CTCGCTAGGTGC TAAT GCACGTAACGAG TTTTGTTTAAGCGGA TERM 335 223109 - 223082 - T 100 -10.6 -6.11243 | opp_overlap 223082 223077, overlap 223073 AGCCAATAAAAAAAA CTCGCTAGGTGC TAAT GCACGTAACGAG TTTTGTTTAAGCGGA LVIS_0206 223784 - 223128 - | C-di-GMP-specific phosphodiesterase TERM 336 224102 - 224134 + r 100 -16.5 -3.37796 | opp_overlap 224102 ATTGGTGATCAAAAA CAGGTAGTTTCAGAA TGA TACTGAAACTACCTG TTATAGGTGCTAACC TERM 337 224134 - 224102 - R 100 -16.5 -4.7254 | opp_overlap 224102 ATTGGTGATCAAAAA CAGGTAGTTTCAGAA TGA TACTGAAACTACCTG TTATAGGTGCTAACC LVIS_0207 224695 - 224171 - | acetyltransferase TERM 338 224778 - 224758 - R 100 -8.9 -4.65895 | opp_overlap 224758 GCGGCTATTGAAAAA CGCCGAGCC AAT AGCCCGACG TTTTAGAAATCAGTA LVIS_0208 225651 - 224788 - | hypothetical protein LVIS_0209 227130 - 225670 - | hypothetical protein TERM 339 226900 - 226910 + g 75 -5.4 -4.73613 | ACTTAATCCCCAGCC CCAA CGT TTGG TTTTCTTCGTCATCG LVIS_0210 227426 - 227593 + | hypothetical protein TERM 340 227642 - 227622 - T 100 -8.2 -5.68039 | AAACGCATAAAAAAA GCGCTCGA AAATA TCGCGCGC TAGAGGTCATTAGTG LVIS_0211 228116 - 227652 - | ADP-ribose pyrophosphatase LVIS_0212 228372 - 228178 - | hypothetical protein TERM 341 228509 - 228542 + r 100 -15.4 -4.19704 | opp_overlap 228509 AGTTGAACGGTAAAA CGCGTGCCTCTTTT CCACTA GAAAGGGGCACGCG TTTTAAGTAAAGTTA TERM 342 228542 - 228509 - R 100 -12.5 -4.19506 | gap 1, opp_overlap 228509 AGTTGAACGGTAAAA CGCGTGCCTCTTTTCC ACT AGAA-AGGGGCACGCG TTTTAAGTAAAGTTA LVIS_0213 229097 - 228561 - | phenolic acid decarboxylase TERM 343 228892 - 228937 + g 81 -12.7 -2.50816 | gap 1, opp_overlap 228899, overlap 228891 228894 CCCGTTGGTTCTGTC CAGGCAACTTTGTAGATGCCGG GAA CCAGCATC-ACAATGTTGGCTG CTTGGTCAGTAACCC TERM 344 229125 - 229142 + H 95 -7.1 -5.42975 | opp_overlap 229125 CTTTTTAATAACGAA CATGTAA TTAA TTACATG TTTTTGTTTATGTGA LVIS_0214 229330 - 229791 + | transcriptional regulator TERM 345 229844 - 229808 - T 100 -8.8 -4.87807 | gap 1, opp_overlap 229808 TGAATAGACGAAAAA GGTTCCGCAACGACG GATATAGT CGG-GTTGCGGAACC TTTTTCGTGTCTAGC TERM 346 229808 - 229844 + T 100 -9.5 -4.84527 | gap 1, opp_overlap 229808 TGAATAGACGAAAAA GGTTCCGCAACGACGG ATATAG TCGG-GTTGCGGAACC TTTTTCGTGTCTAGC LVIS_0215 230464 - 229898 - | transcriptional regulator LVIS_0216 230576 - 231613 + | nucleoside-diphosphate-sugar epimerase LVIS_0217 231693 - 232136 + | acetyltransferase LVIS_0218 232129 - 232581 + | transcriptional regulator TERM 347 232615 - 232590 - f 93 -9.1 -4.48449 | gap 1, opp_overlap 232590 TTACTAAAATAGAAA CACCACGA-TGA CAA CCAATCGTGGTG TTTTTTTGTAGATCA TERM 348 232590 - 232615 + F 100 -9.1 -5.64274 | opp_overlap 232590 TTACTAAAATAGAAA CACCACGAT GACAACCA ATCGTGGTG TTTTTTTGTAGATCA TERM 349 232953 - 232908 - f 100 -12.8 -3.63515 | gap 1, opp_overlap 232913, overlap 232910 232913 TTCTAGCGTGAAGAA CACAACGCCGGGATGATCACG AATTG CGTGAT-ATCTCGGCGTTATA CATAAATAAAGATAG TERM 350 232951 - 232910 - f 100 -13.2 -3.39784 | gap 1, opp_overlap 232913, overlap 232908 232913 CTAGCGTGAAGAACA CAACGCCGGGATGATCACG AATTG CGTGAT-ATCTCGGCGTTA TACATAAATAAAGAT TERM 351 232948 - 232913 - f 100 -12.7 -3.83318 | gap 1, opp_overlap 232913, overlap 232910 232908 GCGTGAAGAACACAA CGCCGGGATGATCACG AATTG CGTGAT-ATCTCGGCG TTATACATAAATAAA TERM 352 232913 - 232948 + F 100 -14.9 -3.36878 | gap 1, opp_overlap 232913 232910 232908 GCGTGAAGAACACAA CGCCGGGATGATCACG AATTG CGTGAT-ATCTCGGCG TTATACATAAATAAA TERM 353 233116 - 233106 - f 82 -3.2 -5.52384 | CTGTTATGAAAAAAA GAAG AAT CCTC ATTGCGACATTTTTG LVIS_0219 233553 - 233972 + | hypothetical protein LVIS_0220 234019 - 234642 + | hypothetical protein TERM 354 234684 - 234709 + F 73 -5.3 -4.74103 | ATACGAATATGAGAA GGGTCGGGGAC AAAA GTCTCGGGCTC TTTTTGCGTTGCCAA LVIS_0221 234923 - 235489 + | permease, cadmium resistance protein TERM 355 235519 - 235497 - T 72 -6.3 -4.27316 | opp_overlap 235497 TGCCGTAATGGAAAA GCCAACC GCATTAATT GGTTGGC TTTTTTTGAACATAC TERM 356 235497 - 235519 + T 91 -7 -5.42259 | opp_overlap 235497 TGCCGTAATGGAAAA GCCAACCG CATTAAT TGGTTGGC TTTTTTTGAACATAC LVIS_0222 236157 - 235507 - | Mn-dependent transcriptional regulator TERM 357 236193 - 236236 + r 100 -23.3 -4.27316 | opp_overlap 236193 CTAATGATGTTAAAA GCCCCACCAAACCGTCGCT AACGGG AGCGCTGGTTTGGTGGGGC TTTTAGCTTACCGGA TERM 358 236236 - 236193 - R 100 -21.1 -4.17023 | opp_overlap 236193 CTAATGATGTTAAAA GCCCCACCAAACCGTCGCT AACGGG AGCGCTGGTTTGGTGGGGC TTTTAGCTTACCGGA LVIS_0223 236681 - 236244 - | UspA family nucleotide-binding protein TERM 359 236649 - 236670 + g 71 -6.7 -4.21462 | overlap 236642 236652 GTCATCGACCCCCAC GAGGATTTT GGTA AAAATCTTC TTTTCAGTCATAGAT TERM 360 237245 - 237222 - g 91 -13.2 -3.40639 | gap 1 AATCTTACCAAGTAA TGGCTGACGCC TTA GGCGTC-GCCA AAGCTACGATTAGCT TERM 361 237339 - 237369 + G 70 -7.7 -3.91084 | gap 1 GGCGGAATTGCGGTC GTCGTTCGATGCTG ACGG CAGCATT-AGCGAC TTTAATTACCAATCA LVIS_0224 237140 - 238060 + | IS30 family transposase LVIS_0225 238131 - 239711 + | manganese transporter NRAMP TERM 362 239738 - 239773 + T 100 -19.2 -5.07567 | opp_overlap 239738 AGTATCACCAAAAAA GCAGTGCCGGCAGAAT TCAA ATTCTGTCGGTACTGC TTTTTTAGCGTGTAA TERM 363 239773 - 239738 - T 100 -14.8 -5.19212 | opp_overlap 239738 AGTATCACCAAAAAA GCAGTGCCGGCAGAAT TCAA ATTCTGTCGGTACTGC TTTTTTAGCGTGTAA LVIS_0226 240785 - 239799 - | guanosine 5'-monophosphate oxidoreductase LVIS_0227 242096 - 240810 - | adenylosuccinate synthase LVIS_0228 242370 - 243668 + | adenylosuccinate lyase TERM 364 243724 - 243693 - f 100 -21 -4.89729 | opp_overlap 243693 TAGAAAATTGAAAAA CGCCTGTACCCAGT GATG ACCGGGTACAGGCG TTTTGGGTTAATCGG TERM 365 243693 - 243724 + F 100 -18.8 -4.30014 | opp_overlap 243693 TAGAAAATTGAAAAA CGCCTGTACCCAGT GATG ACCGGGTACAGGCG TTTTGGGTTAATCGG LVIS_0229 243743 - 244348 + | transcriptional regulator TERM 366 244354 - 244400 + T 83 -11.9 -2.57564 | gap 2, opp_overlap 244354 244359, overlap 244359 GAAACGCTAATTAAC GAAAACACGCTAGTCCAGTGGAT GAA ATCCA--GGGCTAGCGTGTTTTG ATTATGGGACAATAA TERM 367 244400 - 244354 - T 71 -9.7 -2.6296 | gap 2, opp_overlap 244354 244359, overlap 244359 GAAACGCTAATTAAC GAAAACACGCTAGTCCAGTGGAT GAA ATCCAG-GG-CTAGCGTGTTTTG ATTATGGGACAATAA TERM 368 244359 - 244395 + T 100 -11.8 -4.48987 | gap 2, opp_overlap 244354 244359, overlap 244354 GCTAATTAACGAAAA CACGCTAGTCCAGTGGAT GAA ATCCA--GGGCTAGCGTG TTTTGATTATGGGAC TERM 369 244395 - 244359 - T 95 -9.6 -4.4959 | gap 2, opp_overlap 244359 244354, overlap 244354 GCTAATTAACGAAAA CACGCTAGTCCAGTGGAT GAA ATCCAG-GG-CTAGCGTG TTTTGATTATGGGAC TERM 370 244445 - 244419 - T 87 -6.5 -5.19328 | ATGGGACAATAAAAA CCGCACTATCC GGGGA AGACGGTGCGG CCATCATGAGGAGTG LVIS_0230 245643 - 244711 - | alpha/beta fold family hydrolase TERM 371 245712 - 245683 - R 100 -12.9 -5.00616 | opp_overlap 245688 245708 GTTGGCGGTAAAAAA CCAGACTACCCGC AAAT ACGGTTAGTCTGG TCGGATTGCCTAATC LVIS_0231 246516 - 245722 - | protein tyrosine/serine phosphatase LVIS_0232 246692 - 247576 + | esterase/lipase TERM 372 247584 - 247619 + F 100 -15 -5.45802 | AACTTTAAAGTGGAG CGTATGACGTTGATTA GAAG TAGTCAATGTCATACG TTTTTGTTTTAGCAG TERM 373 248577 - 248563 - g 70 -7.8 -3.80014 | ATAGTGATGATGAAA CGGCAC TGG ATGCCG AACAGGCTGGCACGA TERM 374 248599 - 248616 + G 76 -9.1 -3.85817 | CTGGCACGATTGCGC CCCGAGC GAAG GTTCGGG TTTATACGGCCAAGT LVIS_0233 247737 - 249578 + | protease TERM 375 249624 - 249594 - T 100 -12.7 -4.82901 | opp_overlap 249594 GCCCGGTCATAAAAA TAGCGATTACGGT CAACT ACCGTAGTCGCTA TTTTTATGACACATC TERM 376 249594 - 249624 + T 100 -14.9 -4.83615 | opp_overlap 249594 GCCCGGTCATAAAAA TAGCGATTACGGT CAACT ACCGTAGTCGCTA TTTTTATGACACATC TERM 377 249636 - 249648 + T 74 -6.3 -4.48987 | opp_overlap 249636 GCTATTTTTATGACA CATCA ACA TGATG TTTTAGTTGTGGAAA LVIS_0234 250287 - 249628 - | hypothetical protein TERM 378 249920 - 249897 - G 73 -8.8 -3.86897 | TGCAGCGGTTATAAA TCGACACGGC AAAC GCCACGCCGA ATAGGCCGATGATAT TERM 379 250391 - 250372 - R 71 -10 -2.72152 | gap 1, overlap 250368 TTTACCAGAAATTTA CATGCGCGG CAT CCGCGC-TG CTGATCGATCCACAA LVIS_0235 251103 - 250369 - | glutamine amidotransferase TERM 380 250790 - 250800 + g 77 -8.2 -4.19577 | AAGATAGCCTTATCA GCCG CTA CGGC TTGTTTTAACAATTC LVIS_0236 251265 - 251516 + | hypothetical protein TERM 381 251534 - 251553 + F 100 -10 -5.16237 | TTATCAAGTAGTCGG CGGGTTCT TCCG AGAGCCCG TTTTTTAGTGGCCTT LVIS_0237 251655 - 252275 + | endonuclease III-like protein TERM 382 252880 - 252860 - g 84 -13.3 -2.62184 | overlap 252879 GTGGGTTTTAGATCA CGTCCCTGG TGC CCAGGAACG CGCTGAGCGGGGCGA LVIS_0238 252408 - 253922 + | glycerol kinase TERM 383 253934 - 253971 + T 100 -13.6 -5.3671 | gap 2, opp_overlap 253934 TTAAGCAGATTAAAA CCGTGGAACACGCCAGCA CGAG TGCTGGTG-GT-CCACGG TTTTTTAGTTGTCTT TERM 384 253971 - 253934 - T 100 -11.4 -4.39287 | gap 2, opp_overlap 253934 TTAAGCAGATTAAAA CCGTGGAACACGCCAGCA CGAG TGCTGGTG-GT-CCACGG TTTTTTAGTTGTCTT TERM 385 254029 - 253997 - T 100 -20.1 -4.65895 | opp_overlap 253983 253987 254006 GTCTTTAGTCAAAAA GACCGAAGATTCTCA GTC TGAGAATCTTCGGCC CAATGACCATGCTTA LVIS_0239 255080 - 254046 - | periplasmic protease TERM 386 254527 - 254556 + g 75 -7.9 -4.2679 | gap 1 ATGCTGGTCCAACTG GATTTGGG-GAAGC CTA GCTTCACCCACGTC TTTTCGTCAACGTTA LVIS_0240 255970 - 255098 - | hypothetical protein TERM 387 256136 - 256099 - R 100 -14.3 -5.63517 | gap 1, opp_overlap 256100, overlap 256100 TGGGTAAACAAAAAA GCGGCAGCTAACGTGGTG AAG CAC-ACGTTAACTGCCGT TTTTTATGGTTATTG TERM 388 256135 - 256100 - R 100 -17.8 -3.97026 | gap 1, opp_overlap 256100, overlap 256099 GGGTAAACAAAAAAG CGGCAGCTAACGTGGTG AAG CAC-ACGTTAACTGCCG TTTTTTATGGTTATT TERM 389 256100 - 256135 + r 100 -15.6 -5.4111 | gap 1, opp_overlap 256100 256099 GGGTAAACAAAAAAG CGGCAGCTAACGTGGTG AAG CAC-ACGTTAACTGCCG TTTTTTATGGTTATT LVIS_0241 256770 - 256219 - | amidase TERM 390 256487 - 256509 + g 79 -10.7 -3.53224 | opp_overlap 256504 CAGACATTATCTGCC GACTGGTTT TGATT AAACCAGTC TTTGACCGGGCCATA LVIS_0242 256940 - 257257 + | transcriptional regulator LVIS_0243 257250 - 257888 + | hypothetical protein LVIS_0244 257885 - 258859 + | hypothetical protein TERM 391 258887 - 258929 + F 95 -11.5 -3.85698 | gap 1, opp_overlap 258887 258897, overlap 258897 CGAGTAGGGGAGAAA CCAGTAAAA-AGGCGGTGAC TGCG GTTACGGCCTTTTTTGCTGG TTTCTAAGACCAAAC TERM 392 258929 - 258887 - f 70 -7.1 -3.90318 | gap 1, opp_overlap 258887 258897, overlap 258897 CGAGTAGGGGAGAAA CCAGTA-AAAAGGCGGTGAC TGCG GTTACGGCCTTTTTTGCTGG TTTCTAAGACCAAAC TERM 393 258918 - 258897 - f 71 -4.3 -4.85267 | opp_overlap 258887 258897, overlap 258887 AGAAACCAGTAAAAA GGCGGTGAC TGCG GTTACGGCC TTTTTTGCTGGTTTC TERM 394 258897 - 258918 + F 87 -6.5 -5.243 | opp_overlap 258897 258887, overlap 258887 AGAAACCAGTAAAAA GGCGGTGAC TGCG GTTACGGCC TTTTTTGCTGGTTTC TERM 395 259057 - 259072 + G 100 -6 -5.72207 | TTGCTGACCACGCGC GGGCGG AAAA CCGACC TTTTTTTAGTTTGGC TERM 396 259489 - 259444 - g 81 -9.8 -4.09685 | gap 2, opp_overlap 259443 TTGCAGGTGCTAAAA CGGCCGGACTACCAGTCAGTGT CAAA ACAC-GACTGGG-GTACAGCCG ATTGGATGAATGGCG TERM 397 259594 - 259576 - g 74 -6.6 -4.35327 | opp_overlap 259576 259593 GGACGAAAAAGGAAA TGAGTCGG GTG CCGGCCCA TTATGAAATGATTGA LVIS_0245 259014 - 260009 + | tRNA-dihydrouridine synthase TERM 398 260037 - 260071 + F 71 -2 -5.15969 | ATAAATGAATTTAGC GCGTTTCACCAAGTGT TTG ATTATTGGTGGCGCGC TTTTTTACGTTAGCA LVIS_0246 260153 - 261355 + | trans-2-enoyl-CoA reductase LVIS_0247 261580 - 262023 + | flavodoxin LVIS_0248 262051 - 262575 + | acetyltransferase TERM 399 262587 - 262609 + F 100 -10.6 -6.20267 | GTAAGCAAAGTGATG GCGTGTCTCA TGA TGAGATGCGC TTTTTTTATTTTTGA LVIS_0249 263027 - 264367 + | amino acid transporter LVIS_0250 264382 - 265044 + | hypothetical protein TERM 400 265079 - 265061 - f 80 -8.8 -4.02719 | opp_overlap 265061 GCACTAAATACGAAA GACCGGCT AAT AGCTGGTC TTTTTTGCTATGACC TERM 401 265061 - 265079 + F 100 -11 -5.21709 | opp_overlap 265061 GCACTAAATACGAAA GACCGGCT AAT AGCTGGTC TTTTTTGCTATGACC LVIS_0251 265195 - 265794 + | cell surface protein LVIS_0252 265833 - 267980 + | hypothetical protein TERM 402 267993 - 268019 + T 100 -10.2 -4.9218 | opp_overlap 267993 TAAGGCAGTAAAAAA GCTTTCCCCAAT CAG ATTGAGGGAAGC TTTTTGTGATGGATA TERM 403 268019 - 267993 - T 100 -10.2 -5.18357 | opp_overlap 267993 TAAGGCAGTAAAAAA GCTTTCCCCAAT CAG ATTGAGGGAAGC TTTTTGTGATGGATA LVIS_0253 269280 - 268045 - | succinyl-diaminopimelate desuccinylase TERM 404 268900 - 268924 + g 74 -2.9 -5.10933 | GGTTGCCATTAAGCG TAATGTGCC GTGTAGG GGAACATTA TTTTCTTTTAAGTGA TERM 405 269359 - 269337 - H 70 -5.7 -4.41047 | ATTGGTTAATGAAAA TAACCAAGT GCCCA ACTTGATTA CAGCACTTTTTAGGG LVIS_0254 269650 - 270660 + | alcohol dehydrogenase TERM 406 270739 - 270760 + T 90 -5.7 -5.48825 | opp_overlap 270739, overlap 270741 ATAGCAATTCAAAAA GACGATGGC TAAA GCCACCGCC TTTTTTTGACTCATG TERM 407 270760 - 270739 - T 100 -10.1 -4.76892 | opp_overlap 270739 270741 ATAGCAATTCAAAAA GACGATGGC TAAA GCCACCGCC TTTTTTTGACTCATG LVIS_0255 271206 - 270790 - | transcriptional regulator TERM 408 271749 - 271739 - g 77 -8.2 -4.17048 | TGGCCCCGAAAAGAA CGGG TGG CCCG GGCCCGAGCGTTGCT LVIS_0256 271412 - 272341 + | ABC-type proline/glycine betaine transport system, ATPase component TERM 409 273493 - 273482 - g 71 -4.4 -4.78572 | CTTTAATCAACAAAA GGAT GGCT ATCC CGGATTGCGGCAGGC LVIS_0257 272343 - 273863 + | ABC-type proline/glycine betaine transport system, permease and substrate binding protein TERM 410 274192 - 274141 - f 100 -13 -4.08767 | opp_overlap 274144, overlap 274144 TTTAGGGTGGTAAAA CGACGCGTTCGTCCCTTGAACTTA GACA TGAGTTCGGGGGACGAACGCGTTT TTTGGTGATTGACAG TERM 411 274144 - 274189 + F 100 -25.7 -5.2189 | opp_overlap 274141 274144 AGGGTGGTAAAACGA CGCGTTCGTCCCTTGAACTTA GACA TGAGTTCGGGGGACGAACGCG TTTTTTGGTGATTGA TERM 412 274189 - 274144 - f 100 -19.1 -3.08211 | opp_overlap 274144, overlap 274141 AGGGTGGTAAAACGA CGCGTTCGTCCCTTGAACTTA GACA TGAGTTCGGGGGACGAACGCG TTTTTTGGTGATTGA LVIS_0258 274240 - 275364 + | hypothetical protein TERM 413 275418 - 275382 - T 100 -9.5 -5.01535 | opp_overlap 275382 TGACAACGATAAAAA TGTGTTTCCGTGGAC GCTAAAA GTCTACGGGAACACA TTTTAGTCTAGTCAG TERM 414 275382 - 275418 + T 100 -13.9 -4.371 | opp_overlap 275382 TGACAACGATAAAAA TGTGTTTCCGTGGAC GCTAAAA GTCTACGGGAACACA TTTTAGTCTAGTCAG LVIS_0259 275980 - 275426 - | flavoprotein LVIS_0260 276010 - 276504 + | transcriptional regulator TERM 415 276536 - 276507 - f 100 -15.1 -4.37527 | opp_overlap 276507 TGATAATCAGTAAAA TGACTGCCGCAGT CATC ATTGCGGCAGTCA TTTTGGGCAAAAAAA TERM 416 276507 - 276536 + F 100 -17.3 -4.07568 | opp_overlap 276507 TGATAATCAGTAAAA TGACTGCCGCAGT CATC ATTGCGGCAGTCA TTTTGGGCAAAAAAA TERM 417 276601 - 276553 - f 100 -12.1 -5.75342 | opp_overlap 276553 TTTGGGCAAAAAAAA TTAACCTCATTGAATCGAACT GGGATTT AGTCTGATTCAATAAGGTTAA TTATTCAATTGGACA TERM 418 276553 - 276601 + F 90 -11.3 -3.73068 | opp_overlap 276553 TTTGGGCAAAAAAAA TTAACCTCATTGAATCGAACTGG GAT TTAGTCTGATTCAATAAGGTTAA TTATTCAATTGGACA LVIS_0261 277143 - 279890 + | cation transport ATPase TERM 419 279986 - 279945 - f 85 -9.5 -4.12603 | gap 1, opp_overlap 279948, overlap 279948 GTCATCAAATAATAA CCAGCAGCTCCCT-TGGAAT TTG ATTCCTGAGGGAGCTGCTTT TTTGATGGTTTTTAA TERM 420 279983 - 279948 - f 100 -15.6 -3.07958 | gap 1, opp_overlap 279948, overlap 279945 ATCAAATAATAACCA GCAGCTCCCT-TGGAAT TTG ATTCCTGAGGGAGCTGC TTTTTTGATGGTTTT TERM 421 279948 - 279983 + F 100 -17.8 -5.25656 | gap 1, opp_overlap 279945 279948 ATCAAATAATAACCA GCAGCTCCCTT-GGAAT TTG ATTCCTGAGGGAGCTGC TTTTTTGATGGTTTT LVIS_0262 280117 - 280380 + | hypothetical protein TERM 422 280420 - 280452 + F 100 -8.5 -4.84492 | overlap 280421 280450 TATTTAAATGACTAT CTGGGTGGTAAGT TTTCAGT GCTTACCACCCAA TTTTATTGTGATTAG TERM 423 280421 - 280451 + F 91 -12 -3.49611 | overlap 280420 280450 ATTTAAATGACTATC TGGGTGGTAAGT TTTCAGT GCTTACCACCCA ATTTTATTGTGATTA LVIS_0263 280668 - 282089 + | dipeptidase LVIS_0264 282125 - 282202 + | hypothetical protein TERM 424 282507 - 282484 - g 71 -3.8 -4.731 | gap 1, overlap 282471 AAGCCATTAAGAAAA CGGCCTACTGG ACG CCAAC-GACCG ACCATGATTATTGGG LVIS_0265 282219 - 283073 + | hypothetical protein TERM 425 283182 - 283145 - T 83 -12 -2.62616 | opp_overlap 283148 283149, overlap 283133 GGATGCGCTACACTA CCAGTGAGCCACGCGG TAGCGG CCGCGTGGCTCAGTTA TAAAACGGGAAGCTG TERM 426 283148 - 283179 + T 100 -16.6 -3.28712 | opp_overlap 283133 283145, overlap 283149 TGCGCTACACTACCA GTGAGCCACGCGGT AGCG GCCGCGTGGCTCAG TTATAAAACGGGAAG TERM 427 283149 - 283178 + T 100 -20.1 -2.57132 | opp_overlap 283133 283145, overlap 283148 GCGCTACACTACCAG TGAGCCACGCGGT AGCG GCCGCGTGGCTCA GTTATAAAACGGGAA TERM 428 283281 - 283231 - T 91 -13.7 -2.5409 | gap 1, opp_overlap 283245, overlap 283245 AGAAGTCCCAACCGA GCGTAAATAAAAAACGAATCTGAG AATA CTCAGGTTCGTTTTTTATTTG-GC TGAATCAGTGGGGAT TERM 429 283268 - 283245 - T 100 -9.6 -5.64421 | opp_overlap 283245, overlap 283231 AGCGTAAATAAAAAA CGAATCTGAG AATA CTCAGGTTCG TTTTTTATTTGGCTG TERM 430 283245 - 283268 + T 100 -11.8 -5.65927 | opp_overlap 283245 283231 AGCGTAAATAAAAAA CGAATCTGAG AATA CTCAGGTTCG TTTTTTATTTGGCTG LVIS_0266 283848 - 283273 - | galactoside O-acetyltransferase LVIS_0267 284139 - 284786 + | fibronectin-binding protein TERM 431 284801 - 284825 + F 100 -8.5 -5.38054 | ACTGAATAATCCACT GAGCGCGACGA TTT TAGTCGGGCTC TTTTTATTTATGGAA LVIS_0268 285063 - 285995 + | DMT family permease TERM 432 286053 - 286003 - T 79 -11.4 -2.50782 | opp_overlap 286008, overlap 286008 AAACTTAGCAAAACC CAAAAGATCGGTCTACTCAG GACTTAAACAG CTGAGTGGACCGATCTTTTT TATAGTGCAGGTAAG TERM 433 286008 - 286048 + T 100 -13.5 -5.31275 | opp_overlap 286003 286008 TAGCAAAACCCAAAA GATCGGTCTACTCAG GACTTAAACAG CTGAGTGGACCGATC TTTTTTATAGTGCAG TERM 434 286048 - 286008 - T 100 -11.3 -4.44277 | opp_overlap 286008, overlap 286003 TAGCAAAACCCAAAA GATCGGTCTACTCAG GACTTAAACAG CTGAGTGGACCGATC TTTTTTATAGTGCAG LVIS_0269 288164 - 286092 - | cation transport ATPase LVIS_0270 288607 - 288161 - | transcriptional regulator LVIS_0271 288850 - 290121 + | D-alanyl-D-alanine carboxypeptidase TERM 435 290137 - 290156 + F 100 -9.3 -5.1675 | TCTACAAGGACTCAG GGACTGG AAATAA CCAGTCC TTTTTTGATAAGTAG LVIS_0272 290245 - 291090 + | aldo/keto reductase TERM 436 291134 - 291188 + T 100 -23.1 -4.15044 | opp_overlap 291138, overlap 291138 GCATAAAGTGATAAA AAAAGACCCCCCGCAGTTACTGG GCATCATCG CCAGTAACTGCGGGGGGTCTTCG TTTATTAAGCACCAC TERM 437 291184 - 291138 - T 100 -28.3 -5.68039 | gap 1, opp_overlap 291134 291138 AAAGTGATAAAAAAA GACCCCCCGCAGTTACTGGGCA TCAT CGCC-AGTAACTGCGGGGGGTC TTCGTTTATTAAGCA TERM 438 291138 - 291184 + T 100 -28.3 -3.68738 | opp_overlap 291138, overlap 291134 AAAGTGATAAAAAAA GACCCCCCGCAGTTACTGG GCATCATCG CCAGTAACTGCGGGGGGTC TTCGTTTATTAAGCA LVIS_0273 293118 - 291193 - | cation transport ATPase TERM 439 292762 - 292778 + g 73 -2.1 -5.14563 | opp_overlap 292765, overlap 292763 TTTTTCAACGGCATT AGAGGCA TTG TGCCGCA TTTTTTGCTCAAAGA LVIS_0274 293507 - 293136 - | cupredoxin-like domain TERM 440 293790 - 293753 - R 100 -11.4 -4.86621 | opp_overlap 293783 293785 AGGGGTAATTAAAAA GCGATCCGTTCAGC TTCAATACCT GCTGAATGGATCGC GACGATCTATTATTA TERM 441 293783 - 293799 + r 73 -7.3 -4.16305 | opp_overlap 293753, overlap 293785 TCAATACCTGCTGAA TGGATCG CGA CGATCTA TTATTATTTATGACT TERM 442 293785 - 293797 + r 70 -7.7 -3.66744 | opp_overlap 293753, overlap 293783 AATACCTGCTGAATG GATCG CGA CGATC TATTATTATTTATGA LVIS_0275 293911 - 293819 - | hypothetical protein TERM 443 294045 - 294027 - R 90 -7.4 -5.14563 | opp_overlap 294015 294027 GCGGCTACCAAAAAA CCCCGA ACAATCG TCGGGG TCATTAGGAAGCTTA LVIS_0276 294906 - 294058 - | xylanase/chitin deacetylase LVIS_0277 295784 - 294960 - | site-specific recombinase XerD TERM 444 295849 - 295899 + r 100 -9.1 -5.2422 | gap 1, opp_overlap 295856, overlap 295852 295854 295856 GACAGTAGTTAAAAA TGAAAAACTGACCGCTAGCCCTCA CTGA TGAGAGC-AGCGGTCAGTCTGTTG TTTTTTACTATGCTT TERM 445 295852 - 295896 + r 100 -10.8 -4.69962 | gap 1, opp_overlap 295856, overlap 295849 295854 295856 AGTAGTTAAAAATGA AAAACTGACCGCTAGCCCTCA CTGA TGAGAGC-AGCGGTCAGTCTG TTGTTTTTTACTATG TERM 446 295854 - 295894 + r 100 -13.4 -3.93875 | gap 1, opp_overlap 295856, overlap 295852 295849 295856 TAGTTAAAAATGAAA AACTGACCGCTAGCCCTCA CTGA TGAGAGC-AGCGGTCAGTC TGTTGTTTTTTACTA TERM 447 295856 - 295892 + r 100 -16 -3.52788 | gap 1, opp_overlap 295856, overlap 295854 295852 295849 GTTAAAAATGAAAAA CTGACCGCTAGCCCTCA CTGA TGAGAGC-AGCGGTCAG TCTGTTGTTTTTTAC TERM 448 295892 - 295856 - R 100 -18.2 -5.18355 | gap 1, opp_overlap 295854 295852 295849 295856 GTTAAAAATGAAAAA CTGACCGCTAGCCCTCA CTGA TGAGAGC-AGCGGTCAG TCTGTTGTTTTTTAC LVIS_0278 296950 - 295907 - | adenosine deaminase TERM 449 297011 - 297000 - H 70 -7.2 -3.82665 | TAGTATATCATGAAA GCGG TTAA CCGC CAGCTAGGATCGATA TERM 450 298743 - 298731 - g 71 -4.7 -4.63592 | overlap 298732 GGCTAAGAAAAAGAA TGCCG CGG CGGCC AAGAAACAACGTGCT LVIS_0279 297421 - 299361 + | acyltransferase TERM 451 299400 - 299370 - f 86 -9.1 -4.3467 | opp_overlap 299370 AGCGTGAGATTAAAA GCGTAAGTGCTAA GATAT TTAGCATCTACGC TTTTTTAGTGGGCGC TERM 452 299370 - 299400 + F 100 -9.8 -5.14563 | opp_overlap 299370 AGCGTGAGATTAAAA GCGTAAGTGCTAAG ATA TTTAGCATCTACGC TTTTTTAGTGGGCGC TERM 453 299763 - 299752 - g 79 -3.6 -5.2112 | AAGAGTATGAAAAAA GCGG CTTT CCAC GTTAAGAGTGGCAGT LVIS_0280 299587 - 300339 + | hypothetical protein TERM 454 300364 - 300383 + F 100 -9.2 -5.08824 | opp_overlap 300364 TGAGTTATTTGAAAA CGGCTGCC AAGT GGTGGCCG TTTTTTGCGTGGAGG TERM 455 301146 - 301164 + G 72 -10.2 -3.05463 | opp_overlap 301143 TTCGGGTAGAAAGTT CAGCGCAG GAA CTGCGCCG TTACATGCACCAAAT LVIS_0281 300569 - 302263 + | oxidoreductase; Myosin-crossreactive antigen ortholog TERM 456 302277 - 302265 - T 70 -7.7 -3.65351 | GGATGTTTAGCTAAA CGCTA GAC TAGCG AGTTGCGGTCAAAAA TERM 457 302336 - 302296 - T 100 -15.6 -5.75342 | opp_overlap 302296 TGCGGTCAAAAAAAA TAGGACCTCCCTAGAATC TGTCT GATTCTGGGGAAGCCCTA TTTTTTTGACCCAGG TERM 458 302296 - 302336 + T 100 -13.4 -5.40072 | opp_overlap 302296 TGCGGTCAAAAAAAA TAGGACCTCCCTAGAATC TGTCT GATTCTGGGGAAGCCCTA TTTTTTTGACCCAGG LVIS_0282 302938 - 302354 - | Signal peptidase I LVIS_0283 303126 - 303518 + | cytidine deaminase TERM 459 303549 - 303582 + T 100 -9.7 -5.00616 | opp_overlap 303548 CTTAAATAAGATTAT TAGCACGTCCAGA TCCTGATT TCTGGAGGTGCTA TTTTTTAGCCCAGAA TERM 460 303947 - 303959 + T 77 -4.9 -5.00616 | opp_overlap 303940 GCATTAACGATCTGC TAAAG ACC CTTTA TTTTTTGGGGAAGAG LVIS_0284 304235 - 303996 - | hypothetical protein LVIS_0285 304484 - 305029 + | transcriptional regulator TERM 461 305054 - 305081 + T 100 -10.6 -4.27316 | opp_overlap 305054 AATCTTAACGAGGAA GTAGCGCGGAAC GGAG GTTTCGGGCTAC TTTTGGGTTAAAGCG TERM 462 305192 - 305148 - T 100 -19.6 -4.63486 | gap 1, opp_overlap 305148 ACGCGTTTAATAAAA GAAGCCGAGTTCTCAGGACGA AAGA TCTT-CTGAGAACTCGGCTTC TTTTAATCACGGTCA TERM 463 305148 - 305192 + T 100 -21.8 -4.26076 | gap 1, opp_overlap 305148 ACGCGTTTAATAAAA GAAGCCGAGTTCTCAGGACGA AAGA TC-TTCTGAGAACTCGGCTTC TTTTAATCACGGTCA LVIS_0286 306526 - 305195 - | Na+/xyloside symporter related transporter TERM 464 306281 - 306297 + g 71 -10.1 -2.76671 | opp_overlap 306281, overlap 306280 306295 GTACCAGAGGAAAAA GGGGCGA CTC TTGCCCC ATTTAGAATGCGTGT TERM 465 306297 - 306281 - G 85 -7.9 -4.82667 | opp_overlap 306281 306280 306295 GTACCAGAGGAAAAA GGGGCGA CTC TTGCCCC ATTTAGAATGCGTGT TERM 466 306392 - 306379 - G 74 -3.1 -5.04733 | CAACGATAAATAAAA TAGCG GCGG CACTA GCTGACAGGCCATAA LVIS_0287 307066 - 306545 - | periplasmic/secreted protein TERM 467 309057 - 309036 - g 80 -4.5 -5.1244 | gap 1, overlap 309056 CTATCAAGATAAAAA CATTGCGGAG GTT CTCCA-AATG TCCGTGACAGCTGCG LVIS_0288 307237 - 309513 + | excinuclease ATPase subunit LVIS_0289 309520 - 309909 + | 4-oxalocrotonate tautomerase TERM 468 309917 - 309934 + F 91 -6.9 -5.55664 | opp_overlap 309917 AATTATGATAAAAGA GGCGGCC GGTT GGTCGTC TTTTTTTGCTGCTAA LVIS_0290 310029 - 311570 + | hypothetical protein TERM 469 311631 - 311606 - T 100 -10.5 -5.28481 | opp_overlap 311606 TAGGTAATCAAAAAA TGAGATCATCC ATCA GGATGGTCTCA TTTTTAGTTAAATAT TERM 470 311606 - 311631 + T 100 -12.7 -4.89009 | opp_overlap 311606 TAGGTAATCAAAAAA TGAGATCATCC ATCA GGATGGTCTCA TTTTTAGTTAAATAT LVIS_0291 312970 - 311639 - | hypothetical protein TERM 471 312086 - 312076 - G 76 -8.2 -4.12188 | CGAGTACTTGGAAAA CGGC ATA GCCG GCTTCAAAACCCAGT TERM 472 313100 - 313058 - R 100 -18 -3.67141 | opp_overlap 313058 313061, overlap 313061 ATAAGGTCACCTAAA TAAGCCATGTCGCCAGAACT TGA AGTTTTGACAACATGGCTTA TTTACCAGTAATAAC TERM 473 313058 - 313100 + r 100 -15.8 -3.58343 | opp_overlap 313058 313061, overlap 313061 ATAAGGTCACCTAAA TAAGCCATGTCGCCAGAACT TGA AGTTTTGACAACATGGCTTA TTTACCAGTAATAAC TERM 474 313061 - 313097 + r 100 -13.1 -3.9281 | opp_overlap 313058 313061, overlap 313058 AGGTCACCTAAATAA GCCATGTCGCCAGAACT TGA AGTTTTGACAACATGGC TTATTTACCAGTAAT TERM 475 313097 - 313061 - R 100 -15.3 -3.96483 | opp_overlap 313061 313058, overlap 313058 AGGTCACCTAAATAA GCCATGTCGCCAGAACT TGA AGTTTTGACAACATGGC TTATTTACCAGTAAT LVIS_0292 313785 - 313123 - | glycine betaine/carnitine/choline ABC transporter, ATP-binding protein LVIS_0293 314719 - 313787 - | periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) TERM 476 314223 - 314233 + g 80 -4 -5.22312 | ATGCCGACCTTCATC TTAG GCG CTAA TTTTTTCATATCACT TERM 477 314741 - 314756 + r 80 -10.4 -3.43919 | overlap 314739 CCTCCTATCGTAATT GCCGTG GTGT CACGGC TGTTTCCAGTTTACC LVIS_0294 315356 - 314730 - | glycine betaine/carnitine/choline ABC transporter, permease protein LVIS_0295 316558 - 315353 - | ABC-type proline/glycine betaine transport system, ATPase component TERM 478 315478 - 315505 + g 80 -2.6 -5.38054 | gap 1 CGATATCAACCAATG CGGTCCGT-GTGA CGA TCCCGACGAGCCG TTTTTGTTTATCAAC TERM 479 316209 - 316225 + g 89 -5.8 -5.27335 | overlap 316210 AGTTCAATCATTTTA TGGGCT TGTTT AGCCCG TTTTTCTTTAGACCA TERM 480 316518 - 316461 - G 77 -6.3 -4.63932 | opp_overlap 316470 316497, overlap 316465 316469 316473 GAGGTCCCAATAAAA GCAATAAATTCACCGCGGTCGACTTCA AGGT TGAAGTCGTCAACGGCAACTTTACCGT TGGGATATTCTTTAC TERM 481 316514 - 316465 - G 82 -10.1 -3.82261 | opp_overlap 316470 316497, overlap 316461 316469 316473 TCCCAATAAAAGCAA TAAATTCACCGCGGTCGACTTCA AGGT TGAAGTCGTCAACGGCAACTTTA CCGTTGGGATATTCT TERM 482 316510 - 316469 - G 77 -6.5 -4.49531 | opp_overlap 316470 316497, overlap 316465 316461 316473 AATAAAAGCAATAAA TTCACCGCGGTCGACTTCA AGGT TGAAGTCGTCAACGGCAAC TTTACCGTTGGGATA TERM 483 316506 - 316473 - G 76 -11.7 -2.78957 | opp_overlap 316470 316497, overlap 316469 316465 316461 AAAGCAATAAATTCA CCGCGGTCGACTTCA AGGT TGAAGTCGTCAACGG CAACTTTACCGTTGG TERM 484 316605 - 316591 - H 84 -11.4 -3.07291 | AATGATGTTACTGAA CCGGCA AAG TGCCGG AAATAAAAAGACGAT LVIS_0296 316769 - 316957 + | hypothetical protein LVIS_0297 317131 - 317433 + | hypothetical protein TERM 485 317468 - 317435 - T 100 -20.5 -3.74658 | opp_overlap 317440, overlap 317440 AAATAATGAGTTAAA GAAAACGCGTTGCCC ATCA GGACAACGCGTTTTC TATGCGGCTTGGGCC TERM 486 317440 - 317463 + T 100 -12.4 -4.53705 | opp_overlap 317435 317440 ATGAGTTAAAGAAAA CGCGTTGCCC ATCA GGACAACGCG TTTTCTATGCGGCTT TERM 487 317463 - 317440 - T 100 -14.6 -4.9138 | opp_overlap 317440, overlap 317435 ATGAGTTAAAGAAAA CGCGTTGCCC ATCA GGACAACGCG TTTTCTATGCGGCTT LVIS_0298 318697 - 317468 - | major facilitator superfamily permease TERM 488 318934 - 318911 - R 100 -8.8 -5.79595 | opp_overlap 318911 GTTGAAAATAAAAAA CGCCTAGGGC CAGA GTCCTAGACG TTTCGGGTTTCCAAA TERM 489 318911 - 318934 + r 75 -8.8 -3.71649 | opp_overlap 318911 GTTGAAAATAAAAAA CGCCTAGGGC CAGA GTCCTAGACG TTTCGGGTTTCCAAA LVIS_0299 319958 - 319005 - | iron-dependent peroxidase TERM 490 319331 - 319344 + g 85 -8.1 -4.73613 | GATCACTGAATTTGT GGCGA CCAA TCGCC TTTTCTTGATCCTCG TERM 491 320092 - 320069 - R 100 -11.8 -5.06505 | AATGATACATAAAAA GAGCCTAAGC TATA GCTTAAGCTC AAAGATTTAAGCCTG LVIS_0300 321265 - 320099 - | bifunctional beta-cystathionase/maltose regulon repressor LVIS_0301 322122 - 321265 - | hypothetical protein LVIS_0302 324290 - 322242 - | hypothetical protein LVIS_0303 325321 - 324302 - | glycosyltransferase-like protein TERM 492 325947 - 325913 - g 74 -10.9 -2.75064 | gap 1, opp_overlap 325914, overlap 325910 TGGTCCATGCAAGCA CCCTTGCCATTCCAGA TATT TCTG-AATGGCAAGGT AAGTTAACGTCAAGT TERM 493 325914 - 325946 + G 87 -14.4 -2.53876 | gap 1, opp_overlap 325913 325910 GGTCCATGCAAGCAC CCTTGCCATTCCAGA TATT TCTG-AATGGCAAGG TAAGTTAACGTCAAG TERM 494 325974 - 325987 + G 75 -5.3 -4.82863 | opp_overlap 325955 325974 AAGTCAGGTAGCCAA CTTGA AGAG TCAAG TTTCTTTTGTGATTA LVIS_0304 325807 - 327156 + | Lyzozyme M1 (1,4-beta-N-acetylmuramidase) TERM 495 327213 - 327188 - g 91 -3.9 -5.67529 | gap 1, opp_overlap 327206, overlap 327189 327190 AACGAAAAACAAAAA TCGTGACGGCAG TGA CTGCCG-CTCTA GCGGTGTTAACATTG LVIS_0305 327169 - 327810 + | hypothetical protein TERM 496 327894 - 327919 + F 100 -11.9 -4.04319 | overlap 327904 327916 TTTGGCGGCAAGGCT GAGTCTGGGAC AAAA GTCTCAGGCTC TTTGTGCGTTTCTGA LVIS_0306 328112 - 329284 + | permease TERM 497 329347 - 329309 - f 100 -11 -4.63184 | opp_overlap 329316, overlap 329311 329316 AAGCGAGTTCAAAAA TTTAAAATGGCGCTACCC TTT GGGCGGCGCCATTTTTTA CGTGGATGGAGAAAA TERM 498 329345 - 329311 - f 93 -13.6 -2.61831 | opp_overlap 329316, overlap 329309 329316 GCGAGTTCAAAAATT TAAAATGGCGCTACCC TTT GGGCGGCGCCATTTTT TACGTGGATGGAGAA TERM 499 329340 - 329316 - f 100 -13.5 -4.4874 | opp_overlap 329316, overlap 329311 329309 TTCAAAAATTTAAAA TGGCGCTACCC TTT GGGCGGCGCCA TTTTTTACGTGGATG TERM 500 329316 - 329340 + F 100 -13.5 -5.09895 | opp_overlap 329316 329311 329309 TTCAAAAATTTAAAA TGGCGCTACCC TTT GGGCGGCGCCA TTTTTTACGTGGATG LVIS_0307 329453 - 330928 + | peptide ABC transporter permease LVIS_0308 330941 - 331600 + | peptide ABC transporter ATPase TERM 501 331610 - 331654 + F 100 -14.6 -2.62983 | gap 1, opp_overlap 331615, overlap 331615 GCTTAGTCTATCGAT AAAAAGGGTTAGTCTCCTTCA GCTC TGAGGG-GACTAACCCTTTTG TGATGTCGGGCTGCG TERM 502 331615 - 331649 + F 100 -14.5 -4.50976 | gap 1, opp_overlap 331615, overlap 331610 GTCTATCGATAAAAA GGGTTAGTCTCCTTCA GCTC TGAGGG-GACTAACCC TTTTGTGATGTCGGG TERM 503 331649 - 331615 - f 100 -12.3 -4.87665 | gap 1, opp_overlap 331610 331615 GTCTATCGATAAAAA GGGTTAGTCTCCTTCA GCTC TGAGGG-GACTAACCC TTTTGTGATGTCGGG TERM 504 332632 - 332642 + G 100 -8.2 -5.54192 | CAACGCTGGCTAGAT CCGG CAA CCGG TTTTTTTGACTTGCT LVIS_0309 331846 - 333483 + | trehalose-6-phosphate hydrolase TERM 505 333524 - 333548 + F 100 -8.5 -4.85599 | overlap 333525 GGCCTGAAATGTCTA CGGGGTGAGAA ATT TTCTCTCCCCA TTTTTATACCGTAAA TERM 506 333525 - 333547 + F 91 -12 -3.50877 | overlap 333524 GCCTGAAATGTCTAC GGGGTGAGAA ATT TTCTCTCCCC ATTTTTATACCGTAA LVIS_0310 333758 - 334132 + | transcriptional regulator TERM 507 334147 - 334183 + F 95 -14 -2.71791 | gap 1, opp_overlap 334147 334149 334154, overlap 334154 ACAATTGAGATTAGA CAGAAAAGAGGTGTGCC CGCG GGTACACCTCTTTT-TG CTTTGCCGCCAAAAT TERM 508 334183 - 334147 - f 83 -11.8 -2.8779 | gap 1, opp_overlap 334147 334154, overlap 334149 334154 ACAATTGAGATTAGA CAGAAAAGAGGTGTGCC CGCG GGTACACCTCTTTT-TG CTTTGCCGCCAAAAT TERM 509 334182 - 334149 - f 79 -11.1 -2.98491 | opp_overlap 334147 334154, overlap 334147 334154 AATTGAGATTAGACA GAAAAGAGGTGTGCC CGCG GGTACACCTCTTTTT GCTTTGCCGCCAAAA TERM 510 334177 - 334154 - f 100 -11 -4.63586 | opp_overlap 334147 334154, overlap 334149 334147 AGATTAGACAGAAAA GAGGTGTGCC CGCG GGTACACCTC TTTTTGCTTTGCCGC TERM 511 334154 - 334177 + F 100 -13.2 -4.98531 | opp_overlap 334154 334149 334147, overlap 334147 AGATTAGACAGAAAA GAGGTGTGCC CGCG GGTACACCTC TTTTTGCTTTGCCGC TERM 512 334629 - 334663 + G 86 -13.6 -2.94595 | opp_overlap 334629, overlap 334632 CGTGTTAGCCATTAA TGCTGCCAAGTCAGTC AAT GGCTGGCTTGGCGTCA TATCTGCAATTTGTT TERM 513 334632 - 334660 + G 88 -13.9 -2.70543 | opp_overlap 334629, overlap 334629 GTTAGCCATTAATGC TGCCAAGTCAGTC AAT GGCTGGCTTGGCG TCATATCTGCAATTT TERM 514 334940 - 334954 + G 71 -4.3 -4.68209 | GTTTTGCCATTAGTT TAACC GCAGG GGTTA TTTGTTTCTTACGGT LVIS_0311 334447 - 335199 + | nicotinamide mononucleotide transporter LVIS_0312 335284 - 336201 + | Mg2+ and Co2+ transporter TERM 515 336208 - 336244 + F 95 -8 -5.15634 | gap 1, opp_overlap 336208 TTTTGGTAAAAGTCA GACGGTTGCGGTCGCCT TTTG GGGTG-CTGCAGTCGTC TTTTTTGATGAGATA LVIS_0313 336412 - 338172 + | pyruvate oxidase or other thiamine pyrophosphate-requiring enzyme TERM 516 338233 - 338271 + F 100 -15.4 -4.23758 | opp_overlap 338233 AGCACTTAGCTAAAA GTAAGGAGGCACTCTCGG ATT TTGAGAATGCCTCCTTGC TTTTGCCTGTCACGT TERM 517 338271 - 338233 - f 100 -14 -4.20084 | opp_overlap 338233 AGCACTTAGCTAAAA GTAAGGAGGCACTCTC GGATTTT GAGAATGCCTCCTTGC TTTTGCCTGTCACGT TERM 518 338325 - 338359 + F 81 -5.1 -5.10933 | gap 1, overlap 338318 GGTTGACCGCGTTGG TAGCGCTACTATCCTA ACCT TAGGG-AGCAGCGTTA TTTTATTTTAAATCG LVIS_0314 338435 - 338854 + | hypothetical protein TERM 519 338868 - 338893 + T 100 -11.9 -5.10064 | AGGTGAAATTGTGGG GAGTCTGGGAC AAAC GTCTCGGACTC TTTTTGTGTATTAGC TERM 520 338944 - 338919 - T 100 -12.7 -4.60258 | opp_overlap 338917 338916 338919 TTAGCAAACAAGAAA CGAGTCATAGC AGTC GCTATAACTCG TGGTTTATTAATTTT TERM 521 338919 - 338944 + T 77 -10.5 -3.17639 | opp_overlap 338919, overlap 338917 338916 TTAGCAAACAAGAAA CGAGTCATAGC AGTC GCTATAACTCG TGGTTTATTAATTTT LVIS_0315 339215 - 338967 - | hypothetical protein LVIS_0316 340671 - 339307 - | Signal transduction histidine kinase LVIS_0317 341362 - 340661 - | DNA-binding response regulator LVIS_0318 341538 - 341834 + | hypothetical protein TERM 522 341885 - 341909 + T 89 -6.4 -5.29385 | opp_overlap 341885 341877, overlap 341886 ATAGAAGCTAATTGA CCAGTAGTGG CGAGA CCGCTACTGA TTTTTTAGTTAGATT TERM 523 341886 - 341908 + T 84 -9.9 -3.76004 | opp_overlap 341885 341877, overlap 341885 TAGAAGCTAATTGAC CAGTAGTGG CGAGA CCGCTACTG ATTTTTTAGTTAGAT TERM 524 341967 - 342001 + T 100 -15.9 -4.81551 | opp_overlap 341967 ACGGACTATTAAAAA TGGTACCCTCAGAAA TTAAC TATCTGAGGGTACCA TTTTTCCTGTCAGTC TERM 525 342001 - 341967 - T 100 -15.9 -4.77438 | opp_overlap 341967 ACGGACTATTAAAAA TGGTACCCTCAGAAA TTAAC TATCTGAGGGTACCA TTTTTCCTGTCAGTC LVIS_0319 342684 - 342043 - | nucleoside-diphosphate-sugar epimerase TERM 526 342353 - 342329 - G 73 -8.5 -3.89822 | GATTGATTCCAGAAA GCGCGATCG TCCGTTC CGAGCGCGC TAATGAGAATGAAGC LVIS_0320 343024 - 344235 + | NADH dehydrogenase, FAD-containing subunit TERM 527 344323 - 344283 - f 100 -9.8 -4.60041 | opp_overlap 344287, overlap 344284 344287 AGTTACTGTTAAAAA GTGAGTCTCCCCAAAATC CAATC GATTTTGGGGAGACTTTT TTCGTTAGTCGGCTG TERM 528 344322 - 344284 - f 100 -13.3 -3.35542 | opp_overlap 344287, overlap 344283 344287 GTTACTGTTAAAAAG TGAGTCTCCCCAAAATC CAATC GATTTTGGGGAGACTTT TTTCGTTAGTCGGCT TERM 529 344319 - 344287 - f 100 -19.4 -2.84171 | opp_overlap 344287, overlap 344284 344283 ACTGTTAAAAAGTGA GTCTCCCCAAAATC CAATC GATTTTGGGGAGAC TTTTTTCGTTAGTCG TERM 530 344287 - 344319 + F 100 -19.4 -5.30155 | opp_overlap 344287 344284 344283 ACTGTTAAAAAGTGA GTCTCCCCAAAATC CAATC GATTTTGGGGAGAC TTTTTTCGTTAGTCG LVIS_0321 344414 - 344932 + | methylated DNA-protein cysteine methyltransferase TERM 531 345151 - 345178 + F 75 -5.6 -4.60041 | opp_overlap 345154, overlap 345140 345152 345154 GGACGTTAGTTAAGA TTACTAGCTTCT GGGG GGGAGCTAGTGG TTTTTAACGCTAAAT LVIS_0322 345228 - 345794 + | transcriptional regulator TERM 532 345796 - 345831 + F 91 -12.8 -2.79912 | opp_overlap 345801 345802 345804, overlap 345804 GGAAGTTAAGTTAGT CAAAACGAGTTGTCAG GAAA CTGACAACTTTTTTTG TGGGTTATTTTTACC TERM 533 345804 - 345823 + F 100 -10.8 -5.66684 | opp_overlap 345804 345802 345801, overlap 345796 AGTTAGTCAAAACGA GTTGTCAG GAAA CTGACAAC TTTTTTTGTGGGTTA TERM 534 345823 - 345804 - f 79 -10.8 -3.11476 | opp_overlap 345796 345804, overlap 345802 345801 AGTTAGTCAAAACGA GTTGTCAG GAAA CTGACAAC TTTTTTTGTGGGTTA LVIS_0323 346010 - 347425 + | NAD-dependent aldehyde dehydrogenase TERM 535 347502 - 347546 + T 100 -13.7 -4.96468 | overlap 347503 TTATCAAATTATTTT TTGAGCGGTAAGCTTCCGGTA TTT TACTGGATATTTACCGCTCAG TTTTGTTTCAATTTG TERM 536 347503 - 347545 + T 100 -15 -3.56254 | overlap 347502 TATCAAATTATTTTT TGAGCGGTAAGCTTCCGGTA TTT TACTGGATATTTACCGCTCA GTTTTGTTTCAATTT TERM 537 347664 - 347704 + T 72 -6.2 -4.36914 | opp_overlap 347667, overlap 347666 347667 AAATTTGGTATAATA AAACCCCTAATGTTGGAT TGATT GTCCAATGTTAGGGGGTA TTTTATCGAGCGAGC TERM 538 347666 - 347702 + T 78 -8.8 -3.79419 | opp_overlap 347667, overlap 347664 347667 ATTTGGTATAATAAA ACCCCTAATGTTGGAT TGATT GTCCAATGTTAGGGGG TATTTTATCGAGCGA TERM 539 347701 - 347667 - T 85 -7.2 -4.77165 | opp_overlap 347666 347664 347667 TTTGGTATAATAAAA CCCCTAATGTTGGA TTGATTG TCCAATGTTAGGGG GTATTTTATCGAGCG TERM 540 347667 - 347701 + T 89 -12.3 -2.8733 | opp_overlap 347667, overlap 347666 347664 TTTGGTATAATAAAA CCCCTAATGTTGGAT TGATT GTCCAATGTTAGGGG GTATTTTATCGAGCG LVIS_0324 348377 - 347727 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase LVIS_0325 349342 - 348374 - | 2-dehydro-3-deoxygluconokinase LVIS_0326 350197 - 349382 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 541 349469 - 349459 - G 73 -2.4 -5.10461 | opp_overlap 349459 CTGAGGCAAGAAAAA CGGC AAC GCCC ATTAATTCGTAAGTT TERM 542 350308 - 350330 + r 100 -12.8 -4.58283 | opp_overlap 350308 AACCTCATAAAAAAA GCAAGTGCGA ATT TTGCACTTGC TTTTTACCCAGATTA TERM 543 350330 - 350308 - R 100 -10.6 -5.63504 | opp_overlap 350308 AACCTCATAAAAAAA GCAAGTGCGA ATT TTGCACTTGC TTTTTACCCAGATTA LVIS_0327 351101 - 350343 - | transcriptional regulator TERM 544 351239 - 351181 - R 100 -32.4 -2.81096 | opp_overlap 351185 351198, overlap 351185 351198 AAAAAGTAAATGAAT CAAAGCAATCGTAAAAAGACTCCTGATA AAA TATCAAGAGCCTTTTTACGATTGCTTTG ATTAAACGGTTTGAT TERM 545 351235 - 351185 - R 100 -27.4 -4.04997 | opp_overlap 351185 351198, overlap 351181 351198 AGTAAATGAATCAAA GCAATCGTAAAAAGACTCCTGATA AAA TATCAAGAGCCTTTTTACGATTGC TTTGATTAAACGGTT TERM 546 351185 - 351235 + r 100 -23 -3.90856 | opp_overlap 351185 351181 351198, overlap 351198 AGTAAATGAATCAAA GCAATCGTAAAAAGACTCCTGATA AAA TATCAAGAGCCTTTTTACGATTGC TTTGATTAAACGGTT TERM 547 351198 - 351222 + r 75 -5.7 -4.68506 | opp_overlap 351185 351181 351198, overlap 351185 AAGCAATCGTAAAAA GACTCCTGATA AAA TATCAAGAGCC TTTTTACGATTGCTT TERM 548 351222 - 351198 - R 100 -10.1 -4.68506 | opp_overlap 351198 351185, overlap 351185 351181 AAGCAATCGTAAAAA GACTCCTGATA AAA TATCAAGAGCC TTTTTACGATTGCTT LVIS_0328 352626 - 351241 - | galacitol PTS, EIIC TERM 549 352601 - 352587 - G 73 -10 -3.41527 | opp_overlap 352584 352581 TAATTGGCATCATAA CGCTTG CTC CAAGCG ACATAATATAATTGA TERM 550 353345 - 353331 - g 83 -4.2 -5.4593 | TTAAAACAAGAAAAA GGTGTG CCG CAAACC AAATCAAGTCACTAT LVIS_0329 353157 - 353657 + | hypothetical protein LVIS_0330 353782 - 354531 + | 3-oxoacyl-acyl carrier protein reductase TERM 551 354548 - 354584 + T 100 -19.7 -3.9712 | opp_overlap 354548 TAAATATCTAAAAAA TGGGATGATTTAGTCGA TAG TCGGCTAGATCATCCCA TTTGTCATACCCTGG TERM 552 354584 - 354548 - T 100 -15.3 -5.18561 | opp_overlap 354548 TAAATATCTAAAAAA TGGGATGATTTAGTCGA TAG TCGGCTAGATCATCCCA TTTGTCATACCCTGG TERM 553 354634 - 354614 - T 100 -11.9 -5.626 | GATGGTATAAAAAAA GTCCAACCA GAA TGGCTGGAC TCATAAGCTATTGAA LVIS_0331 356021 - 354642 - | manganese transporter NRAMP TERM 554 356214 - 356235 + H 77 -4.5 -4.96848 | opp_overlap 356216, overlap 356216 AACCACACTGGTAAT AATTTTTGG CTTA CCAAAAATA TTTTTATATGAAAAG TERM 555 356216 - 356233 + H 73 -7.1 -4.11141 | opp_overlap 356216, overlap 356214 CCACACTGGTAATAA TTTTTGG CTTA CCAAAAA TATTTTTATATGAAA TERM 556 356549 - 356521 - H 71 -8.3 -3.45742 | opp_overlap 356519 356506 356523, overlap 356519 356523 CTAGTATGAACAATA GATCATCTAGTTT TCA AAACCAGATGATT GCGTTATAATATCCT TERM 557 356547 - 356523 - H 81 -10.9 -3.29544 | opp_overlap 356519 356506 356523, overlap 356519 356521 AGTATGAACAATAGA TCATCTAGTTT TCA AAACCAGATGA TTGCGTTATAATATC TERM 558 356523 - 356547 + H 71 -8.7 -3.25786 | opp_overlap 356519 356523 356521, overlap 356519 356506 AGTATGAACAATAGA TCATCTAGTTT TCA AAACCAGATGA TTGCGTTATAATATC LVIS_0332 356606 - 357460 + | hypothetical protein TERM 559 357486 - 357468 - f 100 -10.3 -5.5112 | opp_overlap 357472 TGGACTAATAAAAAA GCCACGA TAAGG TCGTGGC TTGAGGGGGTTACGA TERM 560 357966 - 357933 - f 100 -11.8 -4.12532 | opp_overlap 357934, overlap 357934 TTTTTGACATAGAAA GGGCCCTGAGTAAC ATGCGG ATTACTCAGGGCCT TATTAGGAATCTGTT TERM 561 357965 - 357934 - f 100 -15.3 -3.07198 | opp_overlap 357934, overlap 357933 TTTTGACATAGAAAG GGCCCTGAGTAAC ATGCGG ATTACTCAGGGCC TTATTAGGAATCTGT TERM 562 357934 - 357965 + F 100 -14.6 -3.64755 | opp_overlap 357933 357934 TTTTGACATAGAAAG GGCCCTGAGTAA CATGCGGA TTACTCAGGGCC TTATTAGGAATCTGT TERM 563 358285 - 358266 - f 75 -2.2 -5.32882 | overlap 358268 358275 GATCATGAGAAAAAA CATAACTC ATAT AAGTTATA GGCTTAGACAGTTGT TERM 564 358425 - 358407 - f 82 -3.1 -5.46276 | opp_overlap 358407, overlap 358398 358410 AATATACACAAAAAA TTAGTGC CAATT GCACGAA TTATAGCCATTTTAA TERM 565 358715 - 358729 + G 71 -2.8 -4.90079 | GACGGTCAGGTTAAG CATCTC GAA GATATG TTTTATTCTTCACCT TERM 566 359922 - 359891 - g 79 -10.2 -3.68366 | overlap 359911 GCAGTTGAAAAGGAA GTTAAGCGAGGG AATAACCA CCCACGCTTAAC GGCTGGGATTGATCC LVIS_0333 358556 - 359965 + | NAD(FAD)-dependent dehydrogenase TERM 567 359979 - 360000 + F 100 -10.1 -5.72207 | opp_overlap 359978 AAAATGAATAAAGTC GGCTGGCGT GTGA ATGCCGGCC TTTTTTTAGTTTAAA TERM 568 360044 - 360031 - f 76 -6.7 -4.56961 | opp_overlap 360032 AAGAGTGACAGAAAA TACCC CTTG GGGTA TACTGCGGGTATTGA LVIS_0334 360086 - 360412 + | Thiol-disulfide isomerase and thioredoxin LVIS_0335 360412 - 360675 + | nickel resistance determinant TERM 569 360688 - 360704 + F 95 -7.9 -5.23316 | opp_overlap 360688 TGATTATTGTGAAAA GTCGCCG AGA TGGCGGC TTTTTTGGTATAATA LVIS_0336 360749 - 361141 + | integral membrane protein for chromosome condensation LVIS_0337 361141 - 361497 + | integral membrane protein for chromosome condensation LVIS_0338 361572 - 362420 + | hypothetical protein TERM 570 362441 - 362411 - f 76 -11.2 -2.6027 | opp_overlap 362414, overlap 362403 362407 CCAAAAGGCAACTGA CGAGCACTGATGAC GCG GTCATCAGTGCTTT TTTAGGCCAAGTGCT TERM 571 362414 - 362438 + F 100 -17.3 -5.00884 | opp_overlap 362403 362411 362407 AAAGGCAACTGACGA GCACTGATGAC GCG GTCATCAGTGC TTTTTTAGGCCAAGT LVIS_0339 362550 - 363404 + | esterase/lipase LVIS_0340 363505 - 363978 + | S-ribosylhomocysteinase TERM 572 363994 - 364022 + F 100 -13.9 -5.13343 | GTGAATTAATGATGA GCCACGTACCGGA TTA TTTGGTGCGTGGC TTTTATTTTGCGTTA LVIS_0341 364322 - 365164 + | hypothetical protein TERM 573 365218 - 365243 + F 82 -3.3 -5.4505 | opp_overlap 365219, overlap 365219 GTTATTAAGAGCAAA TGCTAAATTTC TACG GAGTTTTAGCG TTTTTTATTGGGCGC TERM 574 365773 - 365785 + G 70 -7.7 -3.85817 | TCATGCGGGAGTGAG TGGTG TCC CACCA TTTGTGACGACCAAT TERM 575 366346 - 366323 - g 75 -10.4 -3.34522 | ATAGGGTCCAAGCAA GTTAGCTATC GTCG GATAGCCAAC CAAACCTTTTTACCG LVIS_0342 365363 - 366676 + | cellobiose-specific PTS system IIC component TERM 576 367103 - 367114 + G 71 -3 -4.85782 | TCATTCCAATGGTGG CTTA ATTC TAAG TTTATTTTTAGAAAA LVIS_0343 366666 - 367559 + | alpha/beta hydrolase superfamily protein LVIS_0344 367584 - 368441 + | fhu operon transcription regulator TERM 577 368511 - 368454 - f 78 -9.5 -3.66139 | gap 1, opp_overlap 368461, overlap 368461 TAGATATATGCTAAA TACAAA-ATAGACCAGCTTACCATATTA TTT TTATATGGCGAGTTGGCCTATTTTTGTA AGCGATTAAGTGGTG TERM 578 368461 - 368503 + F 91 -7.8 -4.84017 | opp_overlap 368454 368461 ATGCTAAATACAAAA TAGACCAGCTTACCATATTA TTT TTATATGGCGAGTTGGCCTA TTTTTGTAAGCGATT TERM 579 368503 - 368461 - f 91 -7.8 -4.79451 | opp_overlap 368461, overlap 368454 ATGCTAAATACAAAA TAGACCAGCTTACCATATTA TTT TTATATGGCGAGTTGGCCTA TTTTTGTAAGCGATT LVIS_0345 368769 - 369614 + | permease LVIS_0346 369614 - 369991 + | hypothetical protein TERM 580 370007 - 370029 + T 100 -12.1 -5.04597 | opp_overlap 370007 AAGCACCTAAAAAAA GGAACGAGA TCAGC TCTCGTTCC TTTTTGTATATAAGT TERM 581 370029 - 370007 - T 100 -12.1 -5.49729 | opp_overlap 370007 AAGCACCTAAAAAAA GGAACGAGA TCAGC TCTCGTTCC TTTTTGTATATAAGT LVIS_0347 370802 - 370044 - | Short-chain alcohol dehydrogenase TERM 582 371995 - 371985 - g 78 -5.4 -4.87291 | overlap 371986 GATGCTAACGAAAAA TGTG CCA CACA CATTAACGGGAACGG LVIS_0348 370978 - 372213 + | major facilitator superfamily permease TERM 583 372871 - 372842 - T 81 -10.9 -3.33361 | opp_overlap 372845, overlap 372845 TATGAATGACATTAA GAATCAGATTCGT TCAG AGGAATCTGATTC CATGTCTTGAGACGG TERM 584 372926 - 372907 - T 100 -10 -5.66684 | GAACGCACAAAAAAA GCCTTAGC ATAC GCCAAGGC TCCGGTTTATCGATC LVIS_0350 373157 - 372957 - | hypothetical protein TERM 585 373677 - 373695 + G 81 -12.4 -2.94416 | overlap 373679 CTTACTCGGTGTCTT GATCCCGG TTG CCGGGGTC TATCTAGTGGGGATG LVIS_0351 373399 - 374565 + | Kef-type K+ transport system, membrane component LVIS_0352 374660 - 374842 + | hypothetical protein TERM 586 374882 - 374845 - T 86 -12.1 -2.97602 | opp_overlap 374850, overlap 374850 TAATCAAGAGTAAAG GAAAAGCGTGGCCGAAA ATAA TCTCGGTCACGCTTTTT ATGATTTAGTGACGG TERM 587 374877 - 374850 - T 100 -12 -4.61284 | opp_overlap 374850, overlap 374845 AAGAGTAAAGGAAAA GCGTGGCCGAAA ATAA TCTCGGTCACGC TTTTTATGATTTAGT TERM 588 374850 - 374877 + T 100 -12 -5.05228 | opp_overlap 374850 374845 AAGAGTAAAGGAAAA GCGTGGCCGAAA ATAA TCTCGGTCACGC TTTTTATGATTTAGT LVIS_0353 377608 - 374888 - | hypothetical protein TERM 589 378009 - 378021 + G 74 -9.1 -3.68836 | opp_overlap 378007, overlap 378007 TTTTGGCAAGTCAGG GCGTC TTT GACGC TATTATTTTGGACCT LVIS_0354 377873 - 378565 + | DNA-binding response regulator LVIS_0355 378555 - 379895 + | Signal transduction histidine kinase TERM 590 379911 - 379933 + F 100 -11.2 -4.81551 | GATAGCTTCCTGACA CGGGCTAGCC ATA GGCTGACCCG TTTTTGGTGTGGCTA LVIS_0356 380046 - 381011 + | transcriptional regulator TERM 591 381556 - 381577 + G 73 -8.1 -4.00868 | gap 1 TGTTATGTGTCTGTT GCCTA-ACTC TGG GAGTCTAGGC TTTGGTTATGCGTCA LVIS_0357 381212 - 382585 + | major facilitator superfamily permease TERM 592 383852 - 383826 - g 71 -9.4 -3.4439 | opp_overlap 383833, overlap 383829 383832 TACATCAACGCACAA GAACAAGGGCTC AAA GGGGCCTTGTTC CCAATGGTGACCTTC LVIS_0358 382638 - 384908 + | maltosephosphorylase TERM 593 384920 - 384949 + T 100 -14.4 -5.03405 | opp_overlap 384920 TTAATCTAAAAAAAA GGACGACTGAGA AATTAA TCTCGGTCGTCC TTTTTGTGTGGTGTT TERM 594 384949 - 384920 - T 100 -12.2 -5.86332 | opp_overlap 384920 TTAATCTAAAAAAAA GGACGACTGAGA AATTAA TCTCGGTCGTCC TTTTTGTGTGGTGTT LVIS_0359 385401 - 384964 - | hypothetical protein TERM 595 385425 - 385437 + r 71 -9.1 -3.29558 | overlap 385423 AGTCCTTTGTTTTTT GCAGC CGA GCTGC TGTTAATTAGTGTTA TERM 596 385504 - 385471 - R 100 -8.8 -5.15634 | opp_overlap 385468 385471 TACGGCATGAAAAAA GCCACGTCAAACGC GGTTAA GCGACTGATGTGGC TGAGTTTGGTTTAAC LVIS_0360 385795 - 385526 - | ribosomal protein S14 TERM 597 385955 - 385934 - H 100 -8.7 -4.91459 | CAAGAGTCACAAAAA GTCCTGGAC AGGT GTTCAGGAC TCACTAAATCGACGC TERM 598 386684 - 386708 + H 83 -10.7 -3.44529 | opp_overlap 386680 TGTTGAATCCATGCG GGCCACCATGC AAC GTATTGTGGCC TTCATTGGTATCTAA TERM 599 387707 - 387658 - g 100 -10.2 -4.94972 | gap 3, opp_overlap 387669 387702 TACGAGAATTAAAAA GCCACACCCA-AGTG-GCGACC-TA TAA TATGGTCGCCCACTCTTGGGGTGGC AGTGCAGCCGTTAAT LVIS_0362 387273 - 388097 + | alpha/beta hydrolase superfamily protein LVIS_0363 388918 - 388100 - | HAD superfamily hydrolase LVIS_0364 389166 - 389549 + | transcriptional regulator LVIS_0366 390341 - 391510 + | N-acetylmuramoyl-L-alanine amidase TERM 600 391526 - 391554 + F 100 -16.1 -5.01497 | opp_overlap 391526 TGAATAGTTGAAAAA GACACCGCTAGCA GAC TGTTGGCGGTGTC TTTTTGTCTGGTAAT TERM 601 391554 - 391526 - f 100 -11.7 -4.66953 | opp_overlap 391526 TGAATAGTTGAAAAA GACACCGCTAGCA GAC TGTTGGCGGTGTC TTTTTGTCTGGTAAT LVIS_0367 391921 - 392349 + | arsenate reductase TERM 602 392368 - 392387 + T 100 -10 -5.15634 | opp_overlap 392355 392368 AAGATTAAGGATTAA CCGTGGTC AGTG GATCACGG TTTTTTAGTGCCGTA TERM 603 392424 - 392463 + T 76 -10.9 -2.66451 | opp_overlap 392434, overlap 392421 392434 AGAAAATATAGGCGT ATACAAAAAAGCCGTAC GTAGTA GCACGGCTTTTTTGTAG TGGATTTAGCTCAAT TERM 604 392434 - 392453 + T 82 -4.9 -5.31877 | opp_overlap 392434, overlap 392424 392421 GGCGTATACAAAAAA GCCGTAC GTAGTA GCACGGC TTTTTTGTAGTGGAT TERM 605 392453 - 392434 - T 91 -7.1 -5.36441 | opp_overlap 392424 392421 392434 GGCGTATACAAAAAA GCCGTAC GTAGTA GCACGGC TTTTTTGTAGTGGAT LVIS_0368 393245 - 392469 - | D-alanyl-D-alanine carboxypeptidase LVIS_0369 394343 - 393441 - | hypothetical protein LVIS_0370 394506 - 396593 + | hypothetical protein TERM 606 396610 - 396637 + T 100 -13.5 -5.64873 | opp_overlap 396610 GCAAAGAAGATCAAA GGAGCTGTGAC GAATAG GTCACGGCTCC TTTTTTGTTATTAGA TERM 607 396637 - 396610 - T 100 -11.3 -4.04415 | opp_overlap 396610 GCAAAGAAGATCAAA GGAGCTGTGAC GAATAG GTCACGGCTCC TTTTTTGTTATTAGA LVIS_0371 397070 - 396648 - | permease LVIS_0372 397393 - 397070 - | permease TERM 608 397331 - 397312 - G 73 -7.8 -4.06892 | ATAAGCCCAGATAAA TGGCGGCG CCCC CACCACCA GTTGACAAGACTAAA TERM 609 397973 - 397998 + G 74 -9.7 -3.57263 | opp_overlap 397975 GCCATTATTGGTAAC CAGGCGATCAA TACG TTGGTCGCCGG TTTAGCGGTAGAAAT LVIS_0373 397526 - 398242 + | Short-chain alcohol dehydrogenase TERM 610 398331 - 398309 - T 100 -15.6 -4.34402 | opp_overlap 398309 GGTTGGAGACCAAAA GCGCCCGGAA TCT TTCCGGACGC TTTTTTATGGCAAAA TERM 611 398309 - 398331 + T 100 -13.4 -5.24129 | opp_overlap 398309 GGTTGGAGACCAAAA GCGCCCGGAA TCT TTCCGGACGC TTTTTTATGGCAAAA LVIS_0374 399588 - 398350 - | glycoside-Pentoside-hexuronide (GPH):cation symporter family protein LVIS_0375 401263 - 399581 - | Beta-xylosidase TERM 612 401600 - 401577 - g 91 -13.2 -3.40639 | gap 1 AATCTTACCAAGTAA TGGCTGACGCC TTA GGCGTC-GCCA AAGCTACGATTAGCT TERM 613 401694 - 401724 + G 70 -7.7 -3.91084 | gap 1 GGCGGAATTGCGGTC GTCGTTCGATGCTG ACGG CAGCATT-AGCGAC TTTAATTACCAATCA LVIS_0376 401495 - 402415 + | IS30 family transposase TERM 614 403001 - 402977 - g 77 -4.9 -4.9218 | TACGGACGAGAAAAA CCCGCTGAC AACGACG GCCAGTGGG CTAAAGGATTTGATT LVIS_0377 402501 - 403316 + | AraC-like transcriptional regulator LVIS_0378 404116 - 403352 - | 3-ketoacyl-(acyl-carrier-protein) reductase LVIS_0379 404275 - 405132 + | nucleoside-diphosphate-sugar epimerase LVIS_0380 405182 - 405622 + | transcriptional regulator TERM 615 405662 - 405609 - T 84 -5.4 -5.37345 | gap 2, opp_overlap 405626, overlap 405612 405626 GTGAACGAGAAAAAA GTAGCACACACTAAAAAGGTCGCGAC GATT GTCGGGACCTTTTTTG-GTG-GCAAT TAATGATGAAGTTCA TERM 616 405659 - 405612 - T 89 -11.5 -3.47311 | gap 2, opp_overlap 405626, overlap 405609 405626 AACGAGAAAAAAGTA GCACACACTAAAAAGGTCGCGAC GATT GTCGGGACCTTTTTTG-GTG-GC AATTAATGATGAAGT TERM 617 405647 - 405626 - T 100 -10.1 -4.85129 | opp_overlap 405626, overlap 405612 405609 AGCACACACTAAAAA GGTCGCGAC GATT GTCGGGACC TTTTTTGGTGGCAAT TERM 618 405626 - 405647 + T 100 -10.1 -5.14965 | opp_overlap 405626 405612 405609 AGCACACACTAAAAA GGTCGCGAC GATT GTCGGGACC TTTTTTGGTGGCAAT LVIS_0381 407494 - 405662 - | glycosyl/glycerophosphate transferase LVIS_0383 408910 - 407978 - | hypothetical protein TERM 619 408725 - 408754 + g 74 -9.3 -3.63276 | gap 1, overlap 408748 TGGTGTGATAGTTGG GCGACCG-ATGGTT AAT GACCATGCGGCCGC TTGTCGTTGTTGTGC TERM 620 408980 - 408997 + r 73 -5.5 -4.58283 | TATTATACCCGCTTA TGGATGG GTTA CCAGCCA TTTTTACGCCAATTG TERM 621 409126 - 409097 - R 100 -8.6 -4.9725 | opp_overlap 409099 ATTGGCACACAAAAA CACCTGCTAGAC GGGATA ATCTGGCAGGTG TGATGAATAAGATTT LVIS_0384 409524 - 409162 - | transcriptional regulator TERM 622 409364 - 409376 + g 77 -2.7 -5.28826 | overlap 409351 TCCAACTCCCGTAGT TGTTG CGT TAACA TTTTTTGTGAAATTT LVIS_0385 409655 - 410860 + | arabinose efflux permease TERM 623 410895 - 410864 - T 77 -10.2 -3.07259 | opp_overlap 410863 410869, overlap 410851 410869 AATCATCTTTAAAAT GAAAAGGACGCCCA TAAT CGGACGTCCTTTTT GCTTTTACAGCATTA TERM 624 410869 - 410890 + T 90 -7.2 -5.0925 | opp_overlap 410869 410864, overlap 410863 TCTTTAAAATGAAAA GGACGCCC ATAATC GGACGTCC TTTTTGCTTTTACAG TERM 625 410890 - 410869 - T 100 -10.1 -4.67038 | opp_overlap 410863 410869, overlap 410864 TCTTTAAAATGAAAA GGACGCCCA TAAT CGGACGTCC TTTTTGCTTTTACAG LVIS_0386 411878 - 410925 - | oxidoreductase LVIS_0387 412049 - 412807 + | peptide ABC transporter ATPase TERM 626 413347 - 413357 + G 71 -6.8 -4.21768 | opp_overlap 413346 CTTACTGCATTTAAC CCGT TCC ACGG TTTTAAAATTACTTC LVIS_0388 412820 - 414631 + | peptide ABC transporter permease LVIS_0389 414670 - 415041 + | transcriptional regulator TERM 627 415049 - 415081 + F 100 -11.3 -4.62069 | opp_overlap 415049 415046 ATGCTTAGCAAATGA GTGGTCCCCCTATGA GTC TGATGGGGTGACCAC TTTTTGGGGTAAGCA LVIS_0390 415182 - 415586 + | hypothetical protein TERM 628 415601 - 415622 + F 100 -10.1 -5.96219 | GTTTCCAGTTTGTCG GCATGGGCC AAAT GGCGCATGC TTTTTTTTATGCATC TERM 629 415675 - 415665 - f 74 -4 -5.00616 | overlap 415669 GTCTTGTTTAAAAAA TGAA TTA TTCA AACAGTGAATAAAAA LVIS_0391 415766 - 417097 + | outer membrane protein TERM 630 417139 - 417113 - f 100 -10.8 -4.61231 | opp_overlap 417113 TGATAGTTTTAAAAA GCGATTGGTCCG TTG CGGATCAGTCGC TTTTTATTCATGATG TERM 631 417113 - 417139 + F 100 -15.2 -5.15167 | opp_overlap 417113 TGATAGTTTTAAAAA GCGATTGGTCCG TTG CGGATCAGTCGC TTTTTATTCATGATG TERM 632 417347 - 417357 + G 74 -6.8 -4.42806 | ACAATTATTAGTCAG TGCC CTT GGCA TTTGTTTAGCCCTGC LVIS_0392 417234 - 419042 + | cation transport ATPase TERM 633 419093 - 419043 - T 100 -17.9 -3.15999 | gap 1, opp_overlap 419048, overlap 419048 TCGTTAGAGAGCTAA TAAAAGGTACGGATAC-TGCTGGA ATTG TCCGGCAAGTATCCGTACCTTTTT GACGTCAGGGCCACT TERM 634 419048 - 419088 + T 100 -20 -4.62069 | gap 1, opp_overlap 419043 419048 AGAGAGCTAATAAAA GGTACGGATAC-TGCTGGA ATTG TCCGGCAAGTATCCGTACC TTTTTGACGTCAGGG TERM 635 419088 - 419048 - T 100 -17.8 -4.70772 | gap 1, opp_overlap 419048, overlap 419043 AGAGAGCTAATAAAA GGTACGGATAC-TGCTGGA ATTG TCCGGCAAGTATCCGTACC TTTTTGACGTCAGGG LVIS_0393 419790 - 419107 - | hypothetical protein LVIS_0394 419929 - 421464 + | putative multicopper oxidase TERM 636 421504 - 421480 - T 100 -10.7 -5.22006 | opp_overlap 421480 TCAGTAGAATAAAAA GGGCAATCACA TTA CGTGGTTGCCC TTTTTATTATTCACC TERM 637 421480 - 421504 + T 100 -12.2 -5.29445 | opp_overlap 421480 TCAGTAGAATAAAAA GGGCAATCAC ATTAC GTGGTTGCCC TTTTTATTATTCACC LVIS_0395 421849 - 421511 - | transcriptional regulator LVIS_0396 421872 - 422531 + | permease, cadmium resistance protein TERM 638 422569 - 422536 - T 100 -12.6 -5.09895 | gap 1, opp_overlap 422536 TATGGACGTAAAAAA CCAGTATCACAGCCA TGAAC CGGCTG-GATACTGG TTTTTGCATGAATCA TERM 639 422536 - 422569 + T 100 -11.9 -4.67353 | gap 1, opp_overlap 422536 TATGGACGTAAAAAA CCAGTATCACAGCC ATGAACC GGCTG-GATACTGG TTTTTGCATGAATCA LVIS_0397 423620 - 422589 - | hypothetical protein TERM 640 424199 - 424215 + G 71 -6.6 -4.18934 | GGTATGATTATCAGG TGGTTC GTGAG GAACCA TTTGTTGCCGTGGTG LVIS_0398 423730 - 424617 + | transcriptional regulator TERM 641 424795 - 424805 + G 71 -4.6 -4.56597 | TTAGTTTAGTGATTC CGGT CAT GCCG TTTTTAAAAACAGAA LVIS_0399 424713 - 425903 + | major facilitator superfamily permease TERM 642 425920 - 425960 + F 100 -20 -4.74103 | opp_overlap 425920 TGTGATAGTAAAAAA CGCGTGTTTCTAGGGATC AATTA GATTCTTAGAAACACGCG TTTTTGAGTTCAACG TERM 643 425960 - 425920 - f 100 -15.6 -5.21709 | opp_overlap 425920 TGTGATAGTAAAAAA CGCGTGTTTCTAGGGATC AATTA GATTCTTAGAAACACGCG TTTTTGAGTTCAACG TERM 644 426020 - 425997 - f 89 -7.5 -5.05505 | ACGACAAATTAAAAA GCAACTAGA TGGTTC TCTAGCTGC TCCCCCCAAGGCCCC LVIS_0400 426356 - 427216 + | AraC-like transcriptional regulator TERM 645 427283 - 427311 + F 79 -3 -5.36441 | opp_overlap 427276 427283 GAAAATAAGTTGAAA CCAACGTTGCCG TTAAT CAGACACGTTGG TTTTTTCTGTCAAAA LVIS_0401 427342 - 428973 + | ABC transporter ATPase TERM 646 429042 - 428997 - T 100 -15.1 -5.28176 | opp_overlap 429002, overlap 429002 TTTAGTGACAAAAAA TAAAATCAGTGTTTCAGAATT TTCG AATTCTGGAACACTGATTTTT TATTCTTAAAATAAA TERM 647 429002 - 429037 + T 100 -17.2 -5.64873 | opp_overlap 428997 429002 TGACAAAAAATAAAA TCAGTGTTTCAGAATT TTCG AATTCTGGAACACTGA TTTTTTATTCTTAAA TERM 648 429037 - 429002 - T 100 -15 -5.49579 | opp_overlap 429002, overlap 428997 TGACAAAAAATAAAA TCAGTGTTTCAGAATT TTCG AATTCTGGAACACTGA TTTTTTATTCTTAAA LVIS_0402 429977 - 429048 - | hypothetical protein LVIS_0403 430988 - 430047 - | inosine-uridine nucleoside N-ribohydrolase LVIS_0404 431172 - 431387 + | hypothetical protein TERM 649 431419 - 431463 + T 100 -11.5 -4.6038 | opp_overlap 431421, overlap 431421 CTTGCTGGATTATAA AACGTGTATCATCGGGACTGT CGT AAAGCTCCGGTGATACACGTC TTTTAGTTTGATGTG TERM 650 431421 - 431461 + T 100 -14.1 -3.90002 | opp_overlap 431421, overlap 431419 TGCTGGATTATAAAA CGTGTATCATCGGGACTGT CGT AAAGCTCCGGTGATACACG TCTTTTAGTTTGATG TERM 651 431461 - 431421 - T 100 -11.9 -4.46212 | opp_overlap 431421 431419 TGCTGGATTATAAAA CGTGTATCATCGGGACTGT CGT AAAGCTCCGGTGATACACG TCTTTTAGTTTGATG LVIS_0405 433187 - 431466 - | arylsulfate sulfotransferase LVIS_0406 433369 - 434082 + | hypothetical protein TERM 652 434640 - 434652 + G 74 -6.3 -4.33248 | AATGATGAACGGCTA CAAGA GTT TCTTG TTTATTATGGACTTG LVIS_0407 434107 - 434826 + | integral membrane protein TERM 653 434837 - 434856 + F 100 -10 -5.95539 | opp_overlap 434836 434839 GTTAAACTAACAATG GACTGGGC CTAG GCTCAGTC TTTTTTTATTTAAAA LVIS_0408 434979 - 435353 + | transcriptional regulator LVIS_0409 435350 - 436243 + | ABC-type multidrug transport system, ATPase component TERM 654 437002 - 437030 + G 79 -9.5 -3.94393 | overlap 436997 437008 TGGAGAATATCTCAT GGTGCCCCGGTTG AAA CGACCGGTGTATC TTGTCTTTGTGATTT TERM 655 437008 - 437024 + G 73 -10.1 -3.21236 | overlap 437002 436997 ATATCTCATGGTGCC CCGGTTG AAA CGACCGG TGTATCTTGTCTTTG LVIS_0410 436256 - 437194 + | hypothetical protein TERM 656 437306 - 437280 - T 79 -6.6 -4.72986 | opp_overlap 437280 CATCTGTATTAAAAA GCTGTTGGAT GAAAAAT ATCCAGCAGC TTTTTTGTGGTCTTA TERM 657 437280 - 437306 + T 100 -9.5 -5.36965 | opp_overlap 437280 CATCTGTATTAAAAA GCTGTTGGATG AAAAA TATCCAGCAGC TTTTTTGTGGTCTTA LVIS_0411 438359 - 437319 - | sugar diacid utilization regulator TERM 658 437640 - 437629 - G 71 -4.4 -4.69053 | GAGTAGTGAATAAAA TCAG GACG CTGA AAGATTTGGCTGATG LVIS_0412 438653 - 439957 + | H+/gluconate symporter related permease TERM 659 440717 - 440745 + G 73 -8.1 -4.10161 | CCGGGTGCCGGAGCC GCTGGGGGTCTGG GCG CTGGACTTCTAGC TTTTACGCAATCGTC LVIS_0413 439970 - 441106 + | glycerate kinase TERM 660 441176 - 441138 - T 100 -13.9 -3.80142 | gap 1, opp_overlap 441138 CATAGAATAGGCAAA CGGGCATCGAAC-GGCGT AGTA ACGCTAGTTCGGTGCCCG TTTTGGTTTATGATT TERM 661 441138 - 441176 + T 100 -18.3 -4.64383 | gap 1, opp_overlap 441138 CATAGAATAGGCAAA CGGGCATCGAAC-GGCGT AGTA ACGCTAGTTCGGTGCCCG TTTTGGTTTATGATT LVIS_0414 442639 - 441197 - | hypothetical protein LVIS_0415 443105 - 442626 - | hypothetical protein TERM 662 443406 - 443376 - H 74 -10.5 -2.64134 | opp_overlap 443376, overlap 443373 GATGAAATGAAGCTA GCGGTCTAAATCC TTGCG GAATTTGGACCGC TTTTTTTATGGCCGT TERM 663 443376 - 443406 + H 100 -11.3 -5.61596 | gap 1, opp_overlap 443376 443373 GATGAAATGAAGCTA GCGGTCTAAA-TCC TTGC GGAATTTGGACCGC TTTTTTTATGGCCGT LVIS_0416 443455 - 443895 + | nucleoside 2-deoxyribosyltransferase LVIS_0417 443932 - 445335 + | purine-cytosine permease related protein TERM 664 445379 - 445341 - f 80 -4.6 -5.093 | opp_overlap 445345, overlap 445345 GGCAAAATAATAAAA GCAACGCCTCCAGT TAACCTTTGCG ACTGGAGGCGTTTT TAATTAATCCACCTA TERM 665 445375 - 445345 - f 84 -9.8 -3.89307 | opp_overlap 445345, overlap 445341 AAATAATAAAAGCAA CGCCTCCAGT TAACCTTTGCG ACTGGAGGCG TTTTTAATTAATCCA TERM 666 445345 - 445375 + F 100 -10.5 -4.90266 | opp_overlap 445341 445345 AAATAATAAAAGCAA CGCCTCCAGTT AACCTTTGC GACTGGAGGCG TTTTTAATTAATCCA LVIS_0418 445487 - 445729 + | hypothetical protein TERM 667 446108 - 446121 + G 70 -2.3 -4.93296 | TTGACGGCTGAGTAT GCTTC AACC GCAGC TTTTTGTGCTGCTCA TERM 668 446132 - 446146 + G 73 -10 -3.31501 | GCAGCTTTTTGTGCT GCTCAC CAG GTGAGC TTGTCAACCCTTAAT LVIS_0419 445805 - 447289 + | hypothetical protein TERM 669 447295 - 447328 + F 100 -8.3 -4.93968 | gap 1, opp_overlap 447295 GGAATCGTAAAGTTA GGATACGCTGGAATCG AAG TGATTCTGG-GTATCC TTTTTCATTGTCAAT TERM 670 447627 - 447650 + G 79 -2.4 -5.40072 | gap 1 ACCAGAACGTACGCG GCGAATGGCTG CCT CA-CCTTTTGC TTTTTTTCGCGGAAC LVIS_0420 447427 - 448800 + | hypothetical protein LVIS_0421 448861 - 449229 + | transcriptional regulator TERM 671 449234 - 449269 + T 100 -18.4 -5.1675 | opp_overlap 449234 CGATTCACTAAAAAA TCTCATCACTTGGGGG TTAC CCCCCTGGTGATGAGA TTTTTTGGTGAATCC TERM 672 449269 - 449234 - T 100 -16.2 -5.1675 | opp_overlap 449234 CGATTCACTAAAAAA TCTCATCACTTGGGGG TTAC CCCCCTGGTGATGAGA TTTTTTGGTGAATCC LVIS_0422 449517 - 449287 - | hypothetical protein TERM 673 449849 - 449861 + G 71 -10.5 -2.76225 | overlap 449847 TTATTAGCTTTTTCG GGGCC GGG GGCCC TCGTTGCCGTTGGTT TERM 674 451062 - 451081 + G 76 -7 -4.32436 | ATATTCAGATTGTCT GGGCGACG ATGA CGACGCTC TTTTGATAATGGTGT LVIS_0423 449720 - 451087 + | manganese transporter NRAMP TERM 675 451321 - 451348 + F 100 -12.8 -5.4505 | overlap 451320 CGCGGATTTCAATTC GTCCCTGATGGT TTTA ACCATTGGGGAC TTTTTTATTGGAGAA LVIS_0424 451384 - 452643 + | tyrosyl-tRNA synthetase TERM 676 452659 - 452687 + T 100 -14 -5.06414 | opp_overlap 452659 ATAGGATTTTAGGAA GCACGAACGTTC ATTGC GAATGTTCGTGC TTTTTGTTGGAAAAA TERM 677 452687 - 452659 - T 93 -12.5 -3.1739 | opp_overlap 452659 ATAGGATTTTAGGAA GCACGAACGTTCA TTG CGAATGTTCGTGC TTTTTGTTGGAAAAA TERM 678 453200 - 453219 + T 70 -7.2 -3.79747 | overlap 453201 ATGAGCTTACTTAAG TTCTCATC ATAA GATGAGAG TTTGATCCTGGCTCA TERM 679 453409 - 453428 + T 76 -9.4 -3.5594 | opp_overlap 453409 AATACCGTATAACAA CAAAATCC GCAT GGATTTTG TTTGAAAGGTGGCTT TERM 680 453428 - 453409 - T 81 -9.4 -3.81848 | opp_overlap 453409 AATACCGTATAACAA CAAAATCC GCAT GGATTTTG TTTGAAAGGTGGCTT TERM 681 454821 - 454846 + T 79 -8.3 -4.08557 | TTGAAACAATGTTCA GTTTTGAGGGG CTTA CCTCTCTAAAC TTGTTCTTTGAAAAC TERM 682 457461 - 457445 - T 70 -5.1 -4.4715 | opp_overlap 457450, overlap 457449 GCTCAACGGATAAAA GCTACCC TGG GGATAAC AGGCTTATCTCCCCC TERM 683 458101 - 458125 + T 100 -15.1 -5.46657 | GTTGCCACGCGAGTT GTGGAACCCAG TGA TTGGGTTCCAC TTTTTTATTGCCATC TERM 684 458295 - 458269 - T 72 -7.2 -4.07246 | opp_overlap 458269, overlap 458255 CCAGTCTAAATGAAA CTGACAGCTGGC AAA GCCAAGTGACAG TTGTTCAGGAGACTA TERM 685 458374 - 458318 - T 100 -24.1 -4.97158 | opp_overlap 458321 458332 GGAGACTAAAGAAAA CAACGTAAGTGAAAGGCACCCACAC GAATCCA GTGCGAGTGCCTTTTACTTACGTTG TTGCAGATGGGTCCA TERM 686 458321 - 458371 + T 100 -17.8 -3.63694 | opp_overlap 458318, overlap 458332 GACTAAAGAAAACAA CGTAAGTGAAAGGCACCCACAC GAATCCA GTGCGAGTGCCTTTTACTTACG TTGTTGCAGATGGGT TERM 687 458332 - 458360 + T 73 -5.9 -4.46267 | opp_overlap 458318, overlap 458321 ACAACGTAAGTGAAA GGCACCCACAC GAATCCA GTGCGAGTGCC TTTTACTTACGTTGT LVIS_0429 458881 - 458363 - | NUDIX family hydrolase TERM 688 458774 - 458762 - G 71 -2.6 -4.85782 | overlap 458773 TGTGTTAAAAATAAA GGCG TTAAC CACC AGATGAAACTCACCC LVIS_0430 459552 - 458914 - | hypothetical protein LVIS_0431 460002 - 459556 - | hypothetical protein LVIS_0432 460924 - 460040 - | XRE family transcriptional regulator TERM 689 460972 - 460945 - H 89 -12.2 -3.33815 | opp_overlap 460948 460951, overlap 460948 AGTCCTCCTAATTAA TAATACGTGGCA AATT TGCCACATATTA TACGTCACATTTTTG TERM 690 460969 - 460948 - H 81 -9.5 -3.81146 | opp_overlap 460948 460951, overlap 460945 CCTCCTAATTAATAA TACGTGGCA AATT TGCCACATA TTATACGTCACATTT LVIS_0433 461063 - 462325 + | major facilitator superfamily permease LVIS_0434 462377 - 463711 + | glutathione reductase TERM 691 463729 - 463748 + F 100 -10 -5.47399 | ATCATTAACTTTGAG CCTGGGAC AAAA GTCTCAGG TTTTTTTACGATTCC LVIS_0435 464009 - 464233 + | small membrane protein TERM 692 464249 - 464298 + T 100 -16.9 -3.77219 | gap 1, opp_overlap 464235 464249 464255, overlap 464256 ATTATTTCCGAGAAA TTAAAAGCGGTATCGACAA-GG TGTCCAT CCATTGTCGATACCGTTTTTAA TTTAGGTTGACTGCT TERM 693 464298 - 464249 - T 100 -14.7 -3.87075 | gap 1, opp_overlap 464249 464256, overlap 464235 464255 ATTATTTCCGAGAAA TTAAAAGCGGTATCGACAA-GG TGTCCAT CCATTGTCGATACCGTTTTTAA TTTAGGTTGACTGCT TERM 694 464292 - 464255 - T 100 -9.3 -4.61873 | gap 1, opp_overlap 464249 464256, overlap 464249 TCCGAGAAATTAAAA GCGGTATCGACAA-GG TGTCCAT CCATTGTCGATACCGT TTTTAATTTAGGTTG TERM 695 464256 - 464291 + T 100 -12.8 -5.01042 | gap 1, opp_overlap 464255 464249, overlap 464249 CCGAGAAATTAAAAG CGGTATCGACAA-GG TGTCCAT CCATTGTCGATACCG TTTTTAATTTAGGTT LVIS_0436 464513 - 464331 - | hypothetical protein TERM 696 465443 - 465455 + G 80 -4.8 -5.01732 | overlap 465418 465411 AGTGGGACTAAGTGG CGCA ATTGG TGCG TTTTTTGCCGGCATT LVIS_0437 464718 - 465899 + | Kef-type K+ transport system, membrane component TERM 697 465915 - 465938 + F 100 -11 -5.60993 | opp_overlap 465921 TTAGTGATGTAGCTA GAGAGACTCC TATT GGAGGCTCTC TTTTTTTATAGCAAA LVIS_0438 466159 - 466416 + | hypothetical protein LVIS_0439 466429 - 467178 + | sugar phosphate isomerase/epimerase LVIS_0440 467180 - 468469 + | H+/gluconate symporter related permease LVIS_0441 468496 - 469458 + | 2-dehydro-3-deoxygluconokinase LVIS_0442 469458 - 470081 + | 3-hexulose-6-phosphate synthase related protein LVIS_0443 470078 - 470620 + | sugar phosphate isomerase TERM 698 470659 - 470632 - f 95 -12.8 -3.19003 | opp_overlap 470632 ATAATATCTGACTAA CAGGCAACGC ATACGGGG GCGTTGCCTG TTTTTTGTCGTTAAG TERM 699 470632 - 470659 + F 100 -12.8 -5.37345 | opp_overlap 470632 ATAATATCTGACTAA CAGGCAACGC ATACGGGG GCGTTGCCTG TTTTTTGTCGTTAAG TERM 700 470839 - 470849 + G 77 -6.8 -4.56775 | GCGTTTCGATTGCGA CCGT CTC ACGG TTTTTGAACGGCAAT LVIS_0444 470769 - 471755 + | transcriptional regulator TERM 701 471760 - 471791 + T 100 -8.8 -5.44721 | opp_overlap 471760 AATTACAGTAAAAAA GTTGGCCCTTTC AGCAACAG GAAAAGGCCAAC TTTTTTTAAAATAAT TERM 702 471791 - 471760 - T 100 -11 -5.2422 | opp_overlap 471760 AATTACAGTAAAAAA GTTGGCCCTTTC AGCAACAG GAAAAGGCCAAC TTTTTTTAAAATAAT LVIS_0445 472133 - 471810 - | hypothetical protein LVIS_0446 472250 - 472711 + | hypothetical protein TERM 703 472730 - 472767 + T 100 -23 -3.97088 | opp_overlap 472730 CGGCTTACAATAAAA CCCGTCCACTATAACC AATCGA GGTTATAGTGGACGGG TTTAGTGTTGTCCGG TERM 704 472767 - 472730 - T 100 -23 -4.77165 | opp_overlap 472730 CGGCTTACAATAAAA CCCGTCCACTATAACC AATCGA GGTTATAGTGGACGGG TTTAGTGTTGTCCGG LVIS_0447 475124 - 472818 - | superfamily I DNA/RNA helicase TERM 705 473126 - 473143 + g 77 -4.7 -4.84359 | opp_overlap 473126, overlap 473111 GCTTTTGGTACACGA GCTTGGC TTCA GCCGTGC TTTTTGTCAGAATAG TERM 706 475116 - 475134 + g 74 -11 -2.94322 | overlap 475113 TTGTGCTTCTTCGCT GGTGGTCA AAC TGACCGCC TCCTTTGGATAGGCT TERM 707 475892 - 475922 + H 100 -14.1 -5.00884 | TGGTACCGCGCGTTA GCGTCCTTTTAGC AAGTA GCTAAGAGGGCGC TTTTTTGGAAAGGAT LVIS_0448 475945 - 476961 + | tryptophanyl-tRNA synthetase II LVIS_0449 476982 - 477902 + | exopolyphosphatase LVIS_0450 477914 - 479176 + | hydroxymethylglutaryl-CoA reductase LVIS_0451 479191 - 480156 + | hypothetical protein LVIS_0452 480184 - 480882 + | NAD-dependent deacetylase LVIS_0453 480895 - 481221 + | hypothetical protein LVIS_0454 481233 - 482078 + | hypothetical protein TERM 708 482242 - 482271 + F 74 -7.9 -4.04149 | opp_overlap 482242 GATTTATCCATAAAA CCCCGGTTG TCTGCTATGGCT CAACCGGGG TTTATGCTATACTTG TERM 709 482271 - 482242 - f 82 -7.9 -4.431 | opp_overlap 482242 GATTTATCCATAAAA CCCCGGTTG TCTGCTATGGCT CAACCGGGG TTTATGCTATACTTG LVIS_0455 482357 - 484390 + | methyonyl-tRNA synthetase TERM 710 484445 - 484479 + F 90 -7.2 -5.15969 | gap 2, opp_overlap 484440 484445 ATGTCTAACATAAAA CGTGGACGGTAGAGGC GTTAA GCCG-T-CCGTCCACG TTTTTTAACTTAAGG TERM 711 484479 - 484445 - f 81 -7.2 -4.66938 | gap 2, opp_overlap 484445, overlap 484440 ATGTCTAACATAAAA CGTGGACGGTAGAGGC GTTAA GCCG-T-CCGTCCACG TTTTTTAACTTAAGG LVIS_0456 484510 - 485286 + | Mg-dependent DNase LVIS_0457 485273 - 485845 + | ribonuclease M5 ksgA 485835 - 486725 + | dimethyladenosine transferase LVIS_0459 486825 - 487061 + | hypothetical protein TERM 712 487069 - 487082 + F 87 -5.2 -5.46706 | ATGAATAAATAATTG GGCC GGATAA GGCC TTTTTATTTTGCCGT TERM 713 487156 - 487136 - f 71 -8.3 -3.43492 | opp_overlap 487141, overlap 487138 TCAGATTCACGAGAA CAGTAGACG ATG CGTCTACTT GAGAAGTAAGGTGGA TERM 714 487154 - 487138 - f 81 -10.9 -3.28714 | opp_overlap 487141, overlap 487136 AGATTCACGAGAACA GTAGACG ATG CGTCTAC TTGAGAAGTAAGGTG LVIS_0460 487176 - 488030 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase LVIS_0461 488045 - 488623 + | Uracil-DNA glycosylase TERM 715 488658 - 488695 + T 100 -15.7 -5.04601 | opp_overlap 488658 GATTGATCAAAAAAA CAGTTCTCCCAACGACT CACT GGTCGTTAGGGGAACTG TTTTTAATTTGTCAG TERM 716 488695 - 488658 - T 100 -15 -5.53991 | opp_overlap 488658 GATTGATCAAAAAAA CAGTTCTCCCAACGAC TCACTG GTCGTTAGGGGAACTG TTTTTAATTTGTCAG LVIS_0462 491000 - 488712 - | alpha-xylosidase YicI TERM 717 488737 - 488758 + g 76 -10.9 -3.15768 | overlap 488756 ATCGTTGTAGCTGCA CCATTCAGG GTGA CCTGAGTGG TCTTACCGTTTTCAT TERM 718 491149 - 491133 - H 72 -8.1 -3.767 | GACTCATGTAGTAAA TTGGTTT ACT AAACCAA CTGGGTATTGACAAG LVIS_0463 491279 - 492679 + | Na+/xyloside symporter related transporter LVIS_0464 492702 - 493862 + | transcriptional regulator/sugar kinase, xylose operon regulator TERM 719 493877 - 493916 + F 100 -10.8 -5.42259 | gap 1, opp_overlap 493877 GTGCCACCGAAAAAA TACGATAC-GGCCAGCTCG CGG TGAGCAGGGCAGTATCGTA TTTTTTTCAAAATGG TERM 720 493916 - 493877 - f 100 -10.1 -5.08824 | gap 1, opp_overlap 493877 GTGCCACCGAAAAAA TACGATAC-GGCCAGCTC GCGGT GAGCAGGGCAGTATCGTA TTTTTTTCAAAATGG LVIS_0465 494098 - 495573 + | Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase TERM 721 496356 - 496327 - g 74 -10.9 -3.04792 | gap 1, opp_overlap 496325, overlap 496332 GGATCAGGTTCAACA GTTAATGGTG-GCG CAC CACTCACCATTAAC CGTTGATCTACAGCC LVIS_0466 495557 - 496471 + | transcriptional regulator/sugar kinase TERM 722 496488 - 496512 + F 100 -12.2 -5.48063 | opp_overlap 496487 496486 496490 GACATGTGATAAATG GAGCCTGGGA AAAAA TCTCAGGCTC TTTTTTGTGTTAGGT TERM 723 497032 - 497050 + G 91 -3.9 -5.66229 | gap 1, overlap 497035 CGATTTATATTTTTT GTG-TCCA TCAG TGGATCAC TTTTTTATTGTTGAT LVIS_0467 496644 - 497135 + | hypothetical protein LVIS_0468 497155 - 497442 + | hypothetical protein TERM 724 497510 - 497490 - f 89 -6.9 -5.26875 | opp_overlap 497490 GGGTTAACGAAAAAA CACTCAG TCTTTTG CTGAGTG TTTTTTGTTGGAAAT TERM 725 497490 - 497510 + F 100 -7.6 -5.45652 | opp_overlap 497490 GGGTTAACGAAAAAA CACTCAGT CTTTT GCTGAGTG TTTTTTGTTGGAAAT LVIS_0469 497662 - 498594 + | alpha/beta fold family hydrolase LVIS_0470 498687 - 499613 + | ABC-type metal ion transport system, periplasmic component/surface adhesin LVIS_0471 499610 - 500308 + | ABC-type Mn/Zn transport system, ATPase component TERM 726 500473 - 500499 + G 70 -8 -3.82604 | TCGCTGGCTGGGCGC CGCTGAACGGGA TGC TCCTGTTTACCG TTGTTAGTTCGGTCA LVIS_0472 500301 - 501098 + | ABC-type Mn2+/Zn2+ transport system, permease component TERM 727 501102 - 501149 + T 100 -19.4 -3.63073 | opp_overlap 501103 501106 501110, overlap 501103 501106 501110 ACAGCAGAATAGATA ATAGTAAACGGGACGTAGGCCA GTGA TGGTCTGCGTCCCGTTTATTAG TTCTTGCAAAATCTG TERM 728 501103 - 501148 + T 100 -22.9 -2.77522 | opp_overlap 501103 501106 501110, overlap 501102 501106 501110 CAGCAGAATAGATAA TAGTAAACGGGACGTAGGCCA GTGA TGGTCTGCGTCCCGTTTATTA GTTCTTGCAAAATCT TERM 729 501148 - 501103 - T 100 -16.3 -3.73859 | opp_overlap 501103 501102 501106 501110, overlap 501106 501110 CAGCAGAATAGATAA TAGTAAACGGGACGTAGGCCA GTGA TGGTCTGCGTCCCGTTTATTA GTTCTTGCAAAATCT TERM 730 501145 - 501106 - T 100 -18 -2.65766 | opp_overlap 501103 501102 501106 501110, overlap 501103 501110 CAGAATAGATAATAG TAAACGGGACGTAGGCCA GTGA TGGTCTGCGTCCCGTTTA TTAGTTCTTGCAAAA TERM 731 501106 - 501145 + T 100 -22.4 -3.53444 | opp_overlap 501106 501103 501110, overlap 501103 501102 501110 CAGAATAGATAATAG TAAACGGGACGTAGGCCA GTGA TGGTCTGCGTCCCGTTTA TTAGTTCTTGCAAAA TERM 732 501141 - 501110 - T 100 -14.4 -3.99878 | opp_overlap 501106 501103 501102 501110, overlap 501106 501103 ATAGATAATAGTAAA CGGGACGTAGGCCA GTGA TGGTCTGCGTCCCG TTTATTAGTTCTTGC TERM 733 501110 - 501141 + T 100 -18.8 -4.39877 | opp_overlap 501110 501106 501103, overlap 501106 501103 501102 ATAGATAATAGTAAA CGGGACGTAGGCCA GTGA TGGTCTGCGTCCCG TTTATTAGTTCTTGC LVIS_0473 501680 - 501525 - | hypothetical protein TERM 734 502238 - 502250 + G 80 -4.8 -5.00884 | ACGGCCCCATCAATT GGTC TCATT GACC TTTTTTGCGGCCCGT TERM 735 502330 - 502303 - g 70 -10 -3.19522 | TTAGTGAAGACTTAA CGATTCTGAAAC GGAC ATTTCAGAACCG CGGTACCGGCTTGTT LVIS_0474 502194 - 503009 + | purine operon repressor LVIS_0475 503025 - 504404 + | N-acetylglucosamine-1-phosphate uridyltransferase LVIS_0476 504487 - 505467 + | phosphoribosylpyrophosphate synthetase TERM 736 505481 - 505508 + F 100 -9.2 -5.28481 | gap 1, opp_overlap 505481 AAAGTCATCTAAAAA CTTGAGC-GGCGC GGT GCGTTGGCTCAAG TTTTTTCATTAAGTG TERM 737 505508 - 505481 - f 71 -4.8 -4.69027 | gap 1, opp_overlap 505481 AAAGTCATCTAAAAA CTTGAGC-GGCGC GGT GCGTTGGCTCAAG TTTTTTCATTAAGTG LVIS_0477 505574 - 505933 + | hypothetical protein TERM 738 505965 - 505946 - T 80 -10 -3.67588 | opp_overlap 505946 505948 TAAATTTGACTTAAA GACAGTCG TTGA CGACTGCC TTTTTTATACTCAAA TERM 739 505946 - 505965 + T 100 -7.8 -5.31275 | opp_overlap 505946, overlap 505948 TAAATTTGACTTAAA GACAGTCG TTGA CGACTGCC TTTTTTATACTCAAA TERM 740 505982 - 506003 + T 83 -11.5 -2.91144 | opp_overlap 505983, overlap 505979 TTTTTATACTCAAAA AGGCTGGGG GTCC CCCCAGCCA TAATTTCCAGCGTAA TERM 741 506002 - 505983 - T 100 -15 -4.70659 | opp_overlap 505982 505979 TTTTATACTCAAAAA GGCTGGGG GTCC CCCCAGCC ATAATTTCCAGCGTA LVIS_0478 506444 - 506028 - | transcriptional regulator LVIS_0479 506712 - 507440 + | transcriptional regulator TERM 742 507534 - 507477 - f 76 -10.7 -2.68823 | opp_overlap 507481, overlap 507480 507481 507483 TGGCTCTTACACAAG CAAGCACCCCTTGAAGAAAATTGCCTA AAGT TGAGCAGTTTACTTGAAGGGGTGTTTG TGAAATGGCATAATG TERM 743 507530 - 507481 - f 71 -10.1 -2.69449 | opp_overlap 507481, overlap 507480 507477 507483 TCTTACACAAGCAAG CACCCCTTGAAGAAAATTGCCTA AAGT TGAGCAGTTTACTTGAAGGGGTG TTTGTGAAATGGCAT TERM 744 507481 - 507530 + F 100 -12.3 -3.89524 | opp_overlap 507481 507480 507477 507483 TCTTACACAAGCAAG CACCCCTTGAAGAAAATTGCCTA AAGT TGAGCAGTTTACTTGAAGGGGTG TTTGTGAAATGGCAT TERM 745 508703 - 508678 - g 71 -6.9 -4.18018 | opp_overlap 508682, overlap 508681 TGGTCTGAGCCAAAA CAACTTCAAGG AACT CCCTGAATTTG AAGAATGGATGAACT LVIS_0480 507704 - 510163 + | putative phosphoketolase TERM 746 510216 - 510249 + T 100 -13.9 -5.76633 | TGTGAACATTTTGAA CCGTTACCCAAGCGT GAAA GCGCCTGGGTAATGG TTTTTTTGTGTATAC TERM 747 510268 - 510309 + T 100 -13.9 -4.59853 | gap 1, opp_overlap 510268 510270, overlap 510270 TTTTGTGTATACTAA CAGCCGCTGAGAATACCGAA TGT TTAGG-ATTCTCAGCGGCTA TTTTTAAAGCATTAG TERM 748 510309 - 510268 - T 100 -16.1 -3.25823 | gap 1, opp_overlap 510268 510270, overlap 510270 TTTTGTGTATACTAA CAGCCGCTGAGAATACCGAA TGT TTAGG-ATTCTCAGCGGCTA TTTTTAAAGCATTAG TERM 749 510270 - 510307 + T 100 -16.5 -3.91164 | gap 1, opp_overlap 510270 510268, overlap 510268 TTGTGTATACTAACA GCCGCTGAGAATACCGAA TGT TTAGG-ATTCTCAGCGGC TATTTTTAAAGCATT TERM 750 510307 - 510270 - T 100 -16.5 -3.19602 | gap 1, opp_overlap 510268 510270, overlap 510268 TTGTGTATACTAACA GCCGCTGAGAATACCGAA TGT TTAGG-ATTCTCAGCGGC TATTTTTAAAGCATT TERM 751 510443 - 510412 - T 100 -12.4 -5.50723 | gap 1 GGATCAAAATAAAAA CGGTCAACGC-CGGA TTG TCCAAGCGTTAACCG AAGTTGTACGGGCGA LVIS_0481 511304 - 510489 - | HAD superfamily hydrolase LVIS_0482 512697 - 511339 - | HD superfamily phosphohydrolase LVIS_0483 513533 - 512694 - | lipoate-protein ligase A TERM 752 512725 - 512737 + gH 73 -9.1 -3.55563 | TTATTAAGTTGTGGT TGGCG GCG CGCCA TTTGGGCAGTAGCGT TERM 753 513441 - 513462 + gH 76 -9.5 -3.51573 | gap 1, overlap 513439 TACGAGGTCGAGGAG GGCG-TTGGT GTA ACCAAACGCC TGATTTTTTTGCGTG LVIS_0484 513532 - 513657 + | hypothetical protein TERM 754 513843 - 513790 - fH 73 -8.9 -3.53811 | gap 1 CCCACTTGTCTTAAA GCTCGGTC-TTATCCTAAGCGCGC TAAATCC GCGCGCCAAGGATAACGACGGCAC TGAGCCCATTTACCG LVIS_0485 514149 - 514589 + | hypothetical protein LVIS_0486 514634 - 515302 + | DNA-directed RNA polymerase subunit delta TERM 755 515315 - 515281 - f 82 -5.9 -4.93661 | gap 1, opp_overlap 515284 515287, overlap 515284 AGACGAAGAAGAAAA CG-ACGACGAAAATCA AAAA TAATTTTCGTGGTTCG CTTGACCTCTTTGCC TERM 756 515393 - 515419 + F 100 -13.8 -5.4588 | ACAACTGAACGGTGA GCTCCCTATTCG CAA TGGATAGGGAGC TTTTTTATAGTTTTA LVIS_0487 515480 - 517087 + | CTP synthetase TERM 757 517132 - 517107 - f 71 -8.3 -3.48479 | gap 1, opp_overlap 517107, overlap 517105 517097 TAAAATCCAAGAAGA GCATCACCG-CT TAA AGTCGGTGGTGC TTTTTTGCGATATTT TERM 758 517107 - 517132 + F 100 -10.5 -5.10077 | gap 1, opp_overlap 517107 517105 517097 TAAAATCCAAGAAGA GCATCACCG-CT TAA AGTCGGTGGTGC TTTTTTGCGATATTT LVIS_0488 517278 - 519401 + | hypothetical protein TERM 759 519431 - 519451 + F 100 -15.5 -4.84274 | AATCATGGAGTGATT GACGCTAGC GCG GCTAGCGTC TTTTTAGTGTGGTTA LVIS_0489 520059 - 521441 + | hypothetical protein TERM 760 521423 - 521478 + T 79 -10.8 -3.09834 | gap 1, opp_overlap 521421 TACAGCTAACCGACA GTTTGTTGTGGCCAATTAATTGGCA TCGGTAT TGGCA-TTAATTGGCCACAATCAAC TTAAATCATACCGTA TERM 761 521536 - 521484 - T 100 -23.1 -3.82098 | opp_overlap 521498, overlap 521487 521498 CACAATCAACTTAAA TCATACCGTAAAAAGCACGCAATTC AGT GAACTGCGTGCTTTTTACGGTATCT AAGGGTAACGATTAA TERM 762 521533 - 521487 - T 100 -29.2 -2.98436 | opp_overlap 521498, overlap 521484 521498 AATCAACTTAAATCA TACCGTAAAAAGCACGCAATTC AGT GAACTGCGTGCTTTTTACGGTA TCTAAGGGTAACGAT TERM 763 521522 - 521498 - T 100 -15.1 -4.65168 | opp_overlap 521498, overlap 521487 521484 ATCATACCGTAAAAA GCACGCAATTC AGT GAACTGCGTGC TTTTTACGGTATCTA TERM 764 521498 - 521522 + T 100 -12.9 -4.65838 | opp_overlap 521487 521484 521498 ATCATACCGTAAAAA GCACGCAATTC AGT GAACTGCGTGC TTTTTACGGTATCTA LVIS_0490 521970 - 521548 - | transcriptional regulator LVIS_0491 522087 - 523763 + | acetolactate synthase LVIS_0492 523778 - 524491 + | Alpha-acetolactate decarboxylase TERM 765 524580 - 524550 - f 100 -12.8 -4.14859 | opp_overlap 524550 AGCAACAAGTAGAAA CCGTCTTTGAAT TGAAATT ATTCAAAGACGG TTTTTTTGTGGTCTA TERM 766 524550 - 524580 + F 100 -12.8 -5.69473 | opp_overlap 524550 AGCAACAAGTAGAAA CCGTCTTTGAAT TGAAATT ATTCAAAGACGG TTTTTTTGTGGTCTA TERM 767 524853 - 524867 + F 70 -2.9 -5.03405 | overlap 524859 TCAATAATTGATGAG TGTTT ATAGA AAACA TTTTTATGTAATGTT TERM 768 526234 - 526214 - g 71 -4.8 -4.56597 | gap 1 TTGTGCCCGCAAAAA TCACAGCCA CCAC TGG-TGTGA ACGGGTTAACTATGC LVIS_0493 525103 - 529662 + | hypothetical protein TERM 769 529720 - 529742 + F 100 -13.6 -5.68039 | opp_overlap 529720 529723 CGGTGTTTTACATCA GAATCTAGCA CAA TGCTAGATTC TTTTTTTATCAGTTT TERM 770 529742 - 529720 - f 93 -13.6 -2.62184 | opp_overlap 529720, overlap 529723 CGGTGTTTTACATCA GAATCTAGCA CAA TGCTAGATTC TTTTTTTATCAGTTT TERM 771 529739 - 529723 - f 76 -9.5 -3.46602 | opp_overlap 529720, overlap 529720 TGTTTTACATCAGAA TCTAGCA CAA TGCTAGA TTCTTTTTTTATCAG TERM 772 529809 - 529819 + F 70 -5.4 -4.56775 | TCGCTAAAAGAGTTT GGTT AAT AACC TTTTTAACCGCCAAT LVIS_0494 530006 - 531292 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 773 531441 - 531463 + G 71 -10.6 -2.90075 | opp_overlap 531444 531447, overlap 531447 TTGTGTTCCAAGACT CAAGTACTGG TTT CCAGTTCTTG TCTGGTTCAACGGCA LVIS_0495 531392 - 531643 + | ribosomal protein L31 TERM 774 531668 - 531693 + F 100 -11.9 -5.67283 | gap 1, overlap 531663 TTATGATTTGTCTGG CCGGTGGGCAGC TTA GCTGTC-ACCGG TTTTTTGTTTGGCTT LVIS_0496 531828 - 532541 + | sortase (surface protein transpeptidase) TERM 775 532554 - 532587 + F 80 -3.8 -5.34555 | opp_overlap 532554 532565, overlap 532555 TAAAACTGATAAGTA TGAGGCAATTACCG CGATGA CGGCGATTGTCTCC TTTTTTATGCTGTAA TERM 776 532555 - 532586 + F 70 -7.3 -3.79649 | opp_overlap 532554 532565, overlap 532554 AAAACTGATAAGTAT GAGGCAATTACCG CGATGA CGGCGATTGTCTC CTTTTTTATGCTGTA LVIS_0497 532984 - 533148 + | hypothetical protein LVIS_0498 533312 - 534688 + | hypothetical protein TERM 777 534707 - 534759 + T 100 -13 -4.74706 | opp_overlap 534709 534710, overlap 534710 GAACGCTAAAGGTAA AATCTAAAGAATCGGACTCTTCAA CACAC TTGAAAGGTCCGATTCTTTAGTTG TTTTTGGGTGTTAGG TERM 778 534757 - 534709 - T 100 -15.6 -4.35926 | opp_overlap 534707 534710, overlap 534710 ACGCTAAAGGTAAAA TCTAAAGAATCGGACTCTTCAA CACAC TTGAAAGGTCCGATTCTTTAGT TGTTTTTGGGTGTTA TERM 779 534710 - 534756 + T 100 -19.1 -4.47118 | opp_overlap 534709 534710, overlap 534707 CGCTAAAGGTAAAAT CTAAAGAATCGGACTCTTCAA CACAC TTGAAAGGTCCGATTCTTTAG TTGTTTTTGGGTGTT TERM 780 534756 - 534710 - T 100 -19.1 -3.20832 | opp_overlap 534710 534707, overlap 534709 CGCTAAAGGTAAAAT CTAAAGAATCGGACTCTTCAA CACAC TTGAAAGGTCCGATTCTTTAG TTGTTTTTGGGTGTT LVIS_0499 535240 - 534770 - | protein-tyrosine-phosphatase LVIS_0500 535409 - 535984 + | hypothetical protein LVIS_0501 535993 - 536889 + | heat shock protein HtpX TERM 781 537628 - 537614 - g 71 -6.4 -4.30576 | TCCGGAGCACCAAAA TGCGTG GTA CACACA AGAGGACGTTTACGC LVIS_0502 536964 - 537749 + | hypothetical protein TERM 782 537760 - 537786 + F 100 -15.2 -4.788 | opp_overlap 537763 TTTAGAAGTTGTCAA CCACCGGTGACG AGT TGTCATCGGTGG TTTTTGCGTTAGTTT LVIS_0503 537936 - 539321 + | UDP-N-acetylmuramyl pentapeptide synthase TERM 783 539331 - 539363 + T 71 -4.2 -4.88405 | gap 1, opp_overlap 539334, overlap 539334 AATTAGTGTGAAAGC AAAGCAACTTCT-GC GAGA GCTGGGAGTTGCTTA TTTTCTTTCAGCGTT TERM 784 539334 - 539360 + T 73 -5.9 -4.54026 | gap 1, opp_overlap 539334, overlap 539331 TAGTGTGAAAGCAAA GCAACTTCT-GC GAGA GCTGGGAGTTGC TTATTTTCTTTCAGC LVIS_0504 539476 - 539318 - | hypothetical protein LVIS_0505 539511 - 541082 + | superfamily II DNA/RNA helicase TERM 785 541107 - 541129 + F 100 -9.9 -5.4505 | AGAATTGATTGGAGA GCGCTCATC CTAGT GATGAGTGC TTTTTTATTAAAAAA LVIS_0506 541311 - 542453 + | hypothetical protein TERM 786 542471 - 542496 + F 100 -9.1 -5.252 | gap 1 AATAAGTATTTACTA GGTAGTCGAACT GCG AGT-CGGCTACC TTTTTTGTGCGAATG LVIS_0507 542646 - 543014 + | phosphopantetheinyl transferase (holo-ACP synthase) TERM 787 543180 - 543192 + G 78 -5.5 -4.9725 | opp_overlap 543176, overlap 543176 AGGTGGCTAAAGAGG CCGGT GCC ACTGG TTTTTGTGTGGCCAT TERM 788 543313 - 543284 - g 78 -10.8 -3.36878 | overlap 543312 GTGACGGAGCCAGAA GATGCGCCGTTG ATGGCG CAACAGCACATC TCAGCAACCGTTGCG LVIS_0508 543008 - 544129 + | alanine racemase TERM 789 544121 - 544138 + F 73 -3.5 -4.96848 | gap 1, overlap 544137 TTACCACGAGTTTAT CGTCACTA ATT TA-TGACG TTTTTGTGTCCAGAA LVIS_0509 544218 - 544445 + | hypothetical protein TERM 790 544681 - 544648 - g 93 -14.7 -3.41878 | opp_overlap 544656, overlap 544656 CGCCCGAATCGAGAA GCCAAAAATGCCGAC GCAT GTCGGCATTTCTGCC GCTCGTACTGGGATT TERM 791 544673 - 544656 - g 100 -11.3 -4.78149 | opp_overlap 544656, overlap 544648 TCGAGAAGCCAAAAA TGCCGAC GCAT GTCGGCA TTTCTGCCGCTCGTA TERM 792 544656 - 544673 + G 85 -11.3 -3.88291 | opp_overlap 544648 544656 TCGAGAAGCCAAAAA TGCCGAC GCAT GTCGGCA TTTCTGCCGCTCGTA LVIS_0510 544481 - 544861 + | toxin-antitoxin addiction module toxin component MazF (an endoRNAse) TERM 793 544885 - 544920 + T 100 -12 -4.22009 | gap 1, opp_overlap 544887, overlap 544887 CATAGTGAATGACAT AACCCGTTAGCAG-GTG GAA CACGTTGCTAACGGGTA TTTATGTTCACTAAT TERM 794 544887 - 544918 + T 100 -14.6 -3.70511 | gap 1, opp_overlap 544887, overlap 544885 TAGTGAATGACATAA CCCGTTAGCAG-GTG GAA CACGTTGCTAACGGG TATTTATGTTCACTA TERM 795 544918 - 544887 - T 100 -12.4 -3.60661 | gap 1, opp_overlap 544887 544885 TAGTGAATGACATAA CCCGTTAGC-AGGTG GAA CACGTTGCTAACGGG TATTTATGTTCACTA TERM 796 544972 - 544997 + T 79 -7.6 -4.30177 | opp_overlap 544972 ACTGGATATAAAAAA TCGACAAAGC CAGCAT GCTTTGCCGA TTTCTTCATATACTA TERM 797 544997 - 544972 - T 100 -9.8 -5.37043 | opp_overlap 544972 ACTGGATATAAAAAA TCGACAAAGC CAGCAT GCTTTGCCGA TTTCTTCATATACTA LVIS_0511 545651 - 545010 - | CBS domain-containing protein LVIS_0512 545788 - 545907 + | hypothetical protein TERM 798 545919 - 545939 + T 100 -11.1 -5.2696 | opp_overlap 545919 TTAGGTCGAAAAAAA GGATCTCGC AAG GCGAGACCC TTTTTTAAATTTTCA TERM 799 545939 - 545919 - T 100 -13.3 -5.42259 | opp_overlap 545919 TTAGGTCGAAAAAAA GGATCTCGC AAG GCGAGACCC TTTTTTAAATTTTCA LVIS_0513 547343 - 545955 - | hypothetical protein TERM 800 547673 - 547653 - R 100 -9.7 -5.80951 | AGGCAAAATAAAAAA GCCGTTCCC GTA AGGAACGAC CCCTTTAATCGTTAA LVIS_0514 548646 - 547690 - | L-lactate dehydrogenase TERM 801 548900 - 548933 + H 73 -5.9 -4.48987 | overlap 548902 AAGAATAAACTGAGT CAGCTGAACGGGCCA TTAG TGTCTCGTCCAGCTA TTTTGCTTCTAGCGC TERM 802 548902 - 548931 + H 75 -8.5 -3.85296 | overlap 548900 GAATAAACTGAGTCA GCTGAACGGGCCA TTAG TGTCTCGTCCAGC TATTTTGCTTCTAGC LVIS_0515 548985 - 549542 + | peptidyl-tRNA hydrolase TERM 803 549746 - 549790 + G 73 -8.7 -3.85165 | gap 1, overlap 549748 CTCTATCACGCTAGC CAGCTCGTCGACGATCTAGC CAATTT GCTAGAT-GATGACGAGCTC TTTGACTTTCCCGTG TERM 804 549748 - 549788 + G 79 -11.3 -3.50832 | gap 1, overlap 549746 CTATCACGCTAGCCA GCTCGTCGACGATCTAGC CAATTT GCTAGAT-GATGACGAGC TCTTTGACTTTCCCG TERM 805 551001 - 550991 - g 80 -4.6 -5.16237 | AAGGTGACCAAAAAA CGCC CCC GACG GCAAACGATGGCCAA TERM 806 551254 - 551233 - g 71 -3 -4.91511 | ATCCGAGGATAAAAA GCCCAA GATTAACAAG TTGGGC GGTTCTGAGTGGGCG LVIS_0516 549560 - 553102 + | transcription-repair coupling factor LVIS_0517 553114 - 554694 + | polysaccharide transporter TERM 807 554932 - 554903 - g 80 -9.3 -4.28111 | GAGACGACTAAGAAA GACGATGCTGAAC GGAT GTACACCATCGTC AAGGAAGAATACGCC LVIS_0518 554696 - 554968 + | ribosome-associated heat shock protein implicated in the recycling of the 50S subunit S4-like protein LVIS_0519 555194 - 555487 + | septum formation initiator TERM 808 555499 - 555517 + F 100 -7.5 -6.28967 | opp_overlap 555499 ATAGTGATTGGAAAA TCGAAAC GTTAG GTTTCGA TTTTTTTTATTTGTC TERM 809 555517 - 555499 - f 73 -7.5 -4.15006 | opp_overlap 555499 ATAGTGATTGGAAAA TCGAAAC GTTAG GTTTCGA TTTTTTTTATTTGTC LVIS_0520 555749 - 556294 + | hypothetical protein TERM 810 556308 - 556327 + F 100 -9.2 -5.16071 | AATTGTCTTTGATAG GGACCGCA TTCG TGCGGCCC TTTTTCTTAATGGTT LVIS_0521 556365 - 557717 + | tRNA(Ile)-lysidine synthetase, MesJ LVIS_0522 557734 - 558276 + | hypoxanthine-guanine phosphoribosyltransferase TERM 811 558332 - 558321 - f 70 -5.8 -4.2828 | opp_overlap 558321 TCTTATTTAGTAAAA GAGC ACAA GCTC TTAATTTCGTTCCTA TERM 812 558402 - 558423 + G 75 -5.1 -4.75289 | opp_overlap 558397 558394 558402 558403 GAATAATCGACGAAA CGGTCTGTT TCGT AACAGCCTG TTTTATATTGTGATC TERM 813 559005 - 558976 - g 77 -5 -4.89233 | opp_overlap 558986 GAGGAAGAGGAAAAA CAAGAACTGGTC GAAGTG GTCGAGTTCTTG AAGAATCCACGTAAG TERM 814 560386 - 560402 + G 73 -9.5 -3.29144 | opp_overlap 560389, overlap 560377 560389 CGTCAGGCGTCTACG GAAGCTA AAT TAGCTTC TTCTGCGGCCAATGA LVIS_0523 558385 - 560484 + | ATP-dependent Zn protease TERM 815 560500 - 560522 + F 100 -17.8 -4.78848 | TTGATTGCGTTGAAG GGGACCGGAA TAT TTCCGGTCCC TTTTGTGTTTGCAAA LVIS_0524 560597 - 561484 + | disulfide bond chaperones of the HSP33 family LVIS_0525 561486 - 562508 + | tRNA-dihydrouridine synthase TERM 816 562512 - 562529 + F 100 -8.5 -6.0458 | TATCGAAATTAAGGG TAGGACA GTTA TGTCCTA TTTTTTTTGATTTAT TERM 817 562651 - 562625 - f 80 -3.9 -5.33866 | gap 1 GAAATGCATAAAAAA CAAATTGC-TGA ATAG TCATACAATTTG AAAATAATGCTTGAC TERM 818 563207 - 563188 - f 81 -9.4 -3.81848 | opp_overlap 563188 AATACCGTATAACAA CAAAATCC GCAT GGATTTTG TTTGAAAGGTGGCTT TERM 819 563188 - 563207 + F 76 -9.4 -3.5594 | opp_overlap 563188 AATACCGTATAACAA CAAAATCC GCAT GGATTTTG TTTGAAAGGTGGCTT TERM 820 564774 - 564758 - f 76 -10.9 -2.64243 | TCAGATGGGAGAGCA CCTGCTT TGC AAGCAGG GGGTCAGCGGTTCGA TERM 821 564801 - 564825 + F 74 -9.4 -3.33464 | gap 1, overlap 564801 TCGATCCCGCTATTC TCCATTGGCAC GAGA GTGCCAA-GGA ATTTGTTCTTTGAAA TERM 822 564801 - 564826 + F 74 -6.1 -4.56978 | overlap 564801 TCGATCCCGCTATTC TCCATTGGCAC GAGA GTGCCAAGGAA TTTGTTCTTTGAAAA TERM 823 567442 - 567426 - f 70 -5.1 -4.4715 | opp_overlap 567431, overlap 567430 GCTCAACGGATAAAA GCTACCC TGG GGATAAC AGGCTTATCTCCCCC TERM 824 568268 - 568289 + F 100 -9.5 -5.76633 | opp_overlap 568268 GCCGGCATCAGATAA TCATCAGTC ATTT GACTGGTGA TTTTTTTGTGTCTAG TERM 825 568539 - 568549 + G 73 -5.4 -4.56775 | opp_overlap 568539 CTGGAAATGAAAACT CAAG TCA CTTG TTTTTAGGCGAGGCT LVIS_0533 568502 - 568822 + | cellobiose-specific PTS system IIC component TERM 826 568872 - 568845 - f 100 -17.2 -3.72363 | opp_overlap 568845 TATGCAAATTTGAAA GCCGATTTGTGA GCAT TCACAAATCGGC TTTTTTTATTGATTT TERM 827 568845 - 568872 + F 100 -17.2 -5.9003 | opp_overlap 568845 TATGCAAATTTGAAA GCCGATTTGTGA GCAT TCACAAATCGGC TTTTTTTATTGATTT LVIS_0534 569032 - 570639 + | dipeptide/tripeptide permease TERM 828 570659 - 570684 + F 100 -9.8 -5.14563 | opp_overlap 570659 AATTCACTGCTAAAA GTGCTACTCT ATTATC GGAGTAGCAC TTTTTTAATCGAGGA TERM 829 570684 - 570659 - f 83 -9.1 -4.1196 | opp_overlap 570659 AATTCACTGCTAAAA GTGCTACTC TATTATCG GAGTAGCAC TTTTTTAATCGAGGA LVIS_0535 570748 - 571524 + | phosphohydrolase TERM 830 571778 - 571798 + F 100 -11.9 -5.63504 | opp_overlap 571778 TAGCCCAACTAAGAA CCAGTCACG GTG TGTGACTGG TTTTTTTATGCGCTT TERM 831 571798 - 571778 - f 88 -11.2 -3.8186 | opp_overlap 571778 TAGCCCAACTAAGAA CCAGTCAC GGTGT GTGACTGG TTTTTTTATGCGCTT LVIS_0538 572001 - 572804 + | pyrroline-5-carboxylate reductase TERM 832 572989 - 573007 + G 76 -11 -3.23216 | opp_overlap 572977, overlap 572977 572981 GAAGCCGTTGGCCCA GTGGCTGA TTT TCGGCCAC TTCCTGCTGATGAGG LVIS_0539 572890 - 574032 + | N-acetylglucosamine-6-phosphate deacetylase TERM 833 574726 - 574751 + G 77 -4.7 -4.86731 | opp_overlap 574733 TTGAATATGTGCGGA CTCAATACGTT GGCG AACGATTTGAG TTTTATTTGGAAAAA LVIS_0540 574068 - 574769 + | transcriptional regulator TERM 834 574814 - 574776 - Tf 100 -14.9 -5.3167 | gap 2, opp_overlap 574776 GAAAAATAAATAAAA GTGCCTCACAA--GCGTTA AAT TAACGCGATTGTGAGGCAC TTTGTGTAAAAGCAG TERM 835 574776 - 574814 + TF 100 -14.9 -4.03234 | gap 2, opp_overlap 574776 GAAAAATAAATAAAA GTGCCTCACAA--GCGTTA AAT TAACGCGATTGTGAGGCAC TTTGTGTAAAAGCAG LVIS_0542 576026 - 575286 - | teichoic acid biosynthesis protein LVIS_0541 574838 - 575344 + | acetyltransferase TERM 836 576564 - 576578 + G 74 -6.4 -4.32048 | opp_overlap 576566, overlap 576577 TGGCCGATTGCCAAT TAGTCG AAA CGGCTA TTTTGAATATTATTA TERM 837 576950 - 576928 - g 70 -9.8 -3.18681 | opp_overlap 576926 GCCCAATGCCATCAA GGTGGCCCAA GAA CTGGGCGACC GAATTAATTTCCAAG LVIS_0543 576188 - 577654 + | nicotinate phosphoribosyltransferase nadE 577686 - 578516 + | NAD synthetase TERM 838 578896 - 578880 - g 73 -10.1 -3.19449 | overlap 578869 578871 CAAACAGCCGATCAA GCCGCGT TTG ACGCAGC TGAAGCTACGCAAGA LVIS_0545 578535 - 578969 + | hypothetical protein TERM 839 578999 - 578981 - f 100 -11.7 -4.59853 | opp_overlap 578981 GTAAGCTGTTAAAAA GCCCGAG GCTAT CTCGGGC TTTTTTGGTATTAGA TERM 840 578981 - 578999 + F 100 -12.4 -5.27779 | opp_overlap 578981 GTAAGCTGTTAAAAA GCCCGAGG CTA TCTCGGGC TTTTTTGGTATTAGA TERM 841 581140 - 581164 + G 78 -12.2 -2.52896 | CCTTGGCGGATATTG TGACCGGGTT AAGCA AACCCGGTCG TGACTTACGGGATAG LVIS_0546 579267 - 581462 + | transcriptional accessory protein LVIS_0547 581455 - 581934 + | hypothetical protein TERM 842 582130 - 582118 - g 71 -6.3 -4.25256 | TCGGGATGAAAACAA CTTGA TGG TCAAG ACGGCCTTACAGGTT LVIS_0548 581948 - 582829 + | homoserine kinase TERM 843 583037 - 583072 + T 100 -14.9 -5.50723 | opp_overlap 583037 ATCTATAACGAAAAA GAGTGAGGATCAGCG GTAAAA CGTTGATTCTCACTC TTTTTATTTTACTGA TERM 844 583072 - 583037 - T 100 -10.5 -4.93968 | opp_overlap 583037 ATCTATAACGAAAAA GAGTGAGGATCAGCG GTAAAA CGTTGATTCTCACTC TTTTTATTTTACTGA TERM 845 583161 - 583124 - T 80 -5 -5.24129 | gap 1 CGTCCTCACAAAAAA GGTACTTAGAACAACAC AGTCA GTGTC-TGCCAAGTACC TTTTAGTATATCTAG LVIS_0550 583500 - 583198 - | metal-dependent hydrolase of the TIM-barrel fold LVIS_0551 583577 - 583825 + | hypothetical protein TERM 846 583833 - 583884 + T 73 -8.2 -3.64822 | gap 1, opp_overlap 583833, overlap 583839 TGTTTTAATAACTGA CAAAAAGAATCAGTCTGGCTGGGAA GTG TGCTGAG-CGGACTGATTCTTTTGG TTTGAATGGCAGGAT TERM 847 583839 - 583878 + T 73 -5.8 -4.56914 | gap 1, opp_overlap 583833, overlap 583833 AATAACTGACAAAAA GAATCAGTCTGGCTGGGAA GTG TGCTGAG-CGGACTGATTC TTTTGGTTTGAATGG LVIS_0552 584486 - 583899 - | hypothetical protein TERM 848 584178 - 584168 - G 77 -4.6 -4.90525 | TAACCTCAAAGAAAA CGCC CCA AGCG AGAATGACAATACTG LVIS_0553 584990 - 584553 - | transcriptional regulator TERM 849 585031 - 585014 - H 84 -2.7 -5.60993 | opp_overlap 585017, overlap 585017 TCTTTTATAAAAAAA TAGTGGA TAAG TCCATTA AATTCTTAAATTGGA LVIS_0554 585264 - 586670 + | Na+-driven multidrug efflux pump TERM 850 586657 - 586647 - f 88 -6.8 -5.1101 | GCATTACCTAAAAAA GCTG TGT CAGC AGATTCCCATTAGGC TERM 851 586693 - 586714 + F 91 -6.5 -5.54907 | opp_overlap 586689 586693 AGCATGATAAACTAA GGTGTGGCC TTCG GGTCAGACC TTTTTCTTTTATACG LVIS_0555 586766 - 587377 + | phosphatase TERM 852 587646 - 587665 + F 77 -8.6 -4.07008 | gap 1, opp_overlap 587645 587650, overlap 587643 AGCCATCGCAGATAT GCAAC-CCG TTT CGGAGTTGC TGTTTTTAGTTGATC TERM 853 588267 - 588305 + F 77 -10.3 -3.14132 | gap 1 ATGTTGACCAACAGT GTGTCGG-CCGATGCAGC CGAC GTTGCAGCGGTCCGACAG TTGGTGGCGGCCGGG TERM 854 588402 - 588438 + F 100 -9.4 -4.59773 | opp_overlap 588404, overlap 588404 AAAGGCTTGTCTTAA TACCTCACTCGGTGGG TTACT CTCATCGAGCGGGGTG TTTTTGCGAGTAAAC TERM 855 588404 - 588436 + F 86 -9.8 -3.91506 | opp_overlap 588404, overlap 588402 AGGCTTGTCTTAATA CCTCACTCGGTGGG TTACT CTCATCGAGCGGGG TGTTTTTGCGAGTAA TERM 856 589083 - 589097 + G 85 -5.6 -5.1963 | AATATGATGGCAACG CGGCAA TTG TGGCCG TTTTTCTTCATTGGA LVIS_0557 588489 - 589274 + | mannose-specific PTS system component IIC LVIS_0558 589288 - 590115 + | mannose-specific PTS system component IID TERM 857 590121 - 590151 + T 100 -11.3 -5.26875 | gap 1, opp_overlap 590121 TTTCTATTGAAAAAA GGTGGTCACTG-GT CTGT ACTCAGTGATCACC TTTTTTGATTGGCAA TERM 858 590151 - 590121 - T 100 -9.1 -5.08824 | gap 1, opp_overlap 590121 TTTCTATTGAAAAAA GGTGGTCACTG-GT CTGT ACTCAGTGATCACC TTTTTTGATTGGCAA LVIS_0559 591215 - 590172 - | permease TERM 859 590533 - 590513 - G 73 -3.3 -4.99645 | overlap 590514 590516 AGCCGAGAAAGAAAA CCATAATTC CGA GAATTAAGA GGCTTGGCATGCCGA TERM 860 591333 - 591301 - R 100 -14.9 -3.95424 | opp_overlap 591298 591296 591296 ATGAGCAATACCAAA CACCCCCTCGCCA GTTAATT TGTCGAGGGGGTG CAATGCGTTGGTAGT LVIS_0560 592328 - 591348 - | Signal transduction diguanylate cyclase LVIS_0561 592346 - 593269 + | IS30 family transposase TERM 861 593329 - 593309 - T 73 -8.3 -3.72576 | TCTGCCGTTACTAAA GACCCAACT GTT AGCTGAGTC ACGAACCGAGAGTTG TERM 862 593664 - 593691 + T 100 -13.6 -4.67755 | opp_overlap 593664 AAAAATATCCAAAAA TAAGACAACGGC CACT GTCGTTGTCTTA TTTTTGAATGAGTAT TERM 863 593691 - 593664 - T 100 -11.4 -4.81752 | opp_overlap 593664 AAAAATATCCAAAAA TAAGACAACGGC CACT GTCGTTGTCTTA TTTTTGAATGAGTAT LVIS_0563 594354 - 593707 - | C-di-GMP-specific phosphodiesterase TERM 864 593876 - 593893 + g 71 -6.9 -4.18197 | GGGATTAGGGCTTCT TCGCCGG TTTG CCGGAGA TTTTGCATCGCGAAT TERM 865 594071 - 594088 + g 74 -2.6 -5.0133 | AACTCAATGGTTAGA GCGGCT GGGGCA ATCCGC TTTTTTAAAGCGATA TERM 866 594363 - 594377 + r 78 -4.2 -5.1861 | GATACATAACCGTGT GCTCCT TTT AGTAGC TTTTTTGCTGGTAAA LVIS_0564 595040 - 594471 - | transcriptional regulator LVIS_0565 595197 - 597992 + | hypothetical protein TERM 867 598039 - 598085 + T 100 -20.7 -2.74192 | gap 1, opp_overlap 598039 598043, overlap 598043 AATAATTTGCAATAA TAAATAGGGTTTCCAAGAAGCT ACCT AG-TTCTTGGAAACCCTATTTA TGGTATTAACCGATG TERM 868 598085 - 598039 - T 100 -20.7 -3.66429 | gap 1, opp_overlap 598039 598043, overlap 598043 AATAATTTGCAATAA TAAATAGGGTTTCCAAGAAGCT ACCT AG-TTCTTGGAAACCCTATTTA TGGTATTAACCGATG TERM 869 598081 - 598043 - T 100 -17.1 -4.45068 | gap 1, opp_overlap 598043 598039, overlap 598039 ATTTGCAATAATAAA TAGGGTTTCCAAGAAGCT ACCT AG-TTCTTGGAAACCCTA TTTATGGTATTAACC TERM 870 598043 - 598081 + T 100 -17.1 -4.06384 | gap 1, opp_overlap 598039 598043, overlap 598039 ATTTGCAATAATAAA TAGGGTTTCCAAGAAGCT ACCT AG-TTCTTGGAAACCCTA TTTATGGTATTAACC LVIS_0566 599046 - 598132 - | ABC-type metal ion transport system, periplasmic component/surface adhesin TERM 871 598654 - 598665 + g 83 -4.4 -5.5112 | ATACCAAAGATGCTC GTTG TCCC CAAC TTTTTTCTTCATAAC TERM 872 599063 - 599089 + r 77 -10.4 -3.21772 | overlap 599061 599069 599071 ATTTTCTCTCCTCAA TCTAAATGGTAA TTA TTACTATTTAGA TATTATAGAAAAATT TERM 873 599117 - 599103 - R 70 -2.8 -5.02502 | GATATTATAGAAAAA TTGTCA AAT TGGCAA GGGAAATTTTTAATT TERM 874 599173 - 599148 - R 100 -12 -5.27335 | opp_overlap 599148 TCGTGTAAATAAAAA CCAACCATTC GCAAAG GAATGGTTGG TTTTTATAGTTTATT TERM 875 599148 - 599173 + r 100 -12 -5.0809 | opp_overlap 599148 TCGTGTAAATAAAAA CCAACCATTC GCAAAG GAATGGTTGG TTTTTATAGTTTATT LVIS_0567 600302 - 599187 - | transcriptional regulator LVIS_0568 600670 - 601617 + | AEC family permease TERM 876 601841 - 601859 + G 91 -6.7 -5.24129 | ACATCACCGTTTGAC CAAGTCC GATTG GGGCTTG TTTTTTCTAACGGGG TERM 877 602320 - 602344 + G 71 -7.3 -4.08689 | opp_overlap 602322 TTGCGGCACTGCCAA TATTGCAAAAT GTC AGTTTGCAATA TTTCTGGATTTTGTT LVIS_0569 601656 - 602687 + | DMT family permease TERM 878 602698 - 602727 + F 100 -9.3 -5.28176 | gap 1, opp_overlap 602697 ATTAACACAATAAGG CTGAACGG-GGGCG AAC TGCCAGCCGTTCAG TTTTTTATGAGTAGA LVIS_0570 602826 - 603497 + | phosphoglycerate mutase 1 TERM 879 603527 - 603568 + F 100 -11.1 -4.82667 | gap 1, opp_overlap 603519 603541 TAATAAGTTCGGCTA GTCGG-CGAAAATAATCAGG TGA TCTGATTGTTTTTGGCCGGC TTTTTCGTATAATCA LVIS_0571 603625 - 604857 + | Beta-lactamase class C related penicillin binding protein TERM 880 604864 - 604889 + T 100 -9 -5.46657 | TTGAAATAACCAGGT GTCAGCGGTG AACGTG TGCCGCTGAC TTTTTTATTGACGTA TERM 881 604973 - 604951 - T 100 -14.2 -5.5208 | opp_overlap 604951 TGACAATATAAAAAA CGCCCGAGAA AAA TTCTCGGACG TTTTTTCGAGTAGCC TERM 882 604951 - 604973 + T 100 -12 -5.0538 | opp_overlap 604951 TGACAATATAAAAAA CGCCCGAGAA AAA TTCTCGGACG TTTTTTCGAGTAGCC LVIS_0572 606325 - 604991 - | aminopeptidase C LVIS_0573 606471 - 606641 + | hypothetical protein TERM 883 606723 - 606691 - T 100 -14.2 -5.47218 | opp_overlap 606689 CGTTAGCTAAAAAAA GCCCATTTGACGGC GAGAA ACCGGCAAATGGGC AATCAGTTATTAACT LVIS_0574 607431 - 606745 - | ribose-5-phosphate isomerase A LVIS_0575 607780 - 607439 - | acetyltransferase LVIS_0576 607959 - 608498 + | dUTPase LVIS_0577 608587 - 609969 + | DNA repair protein RadA LVIS_0578 610005 - 611189 + | integral membrane protein TERM 884 611197 - 611220 + F 100 -12.4 -5.08255 | opp_overlap 611196 CTCGGTAGAATGGAG GTCTCACGGC AATG GCCGTGGGGC TTTTATTTTGAAAAT TERM 885 611511 - 611524 + G 73 -2.3 -5.05712 | overlap 611483 TTTGCACATTGGTAA TGCCC GGAC GGCCA TTTTTAATTATTTAT LVIS_0579 611446 - 612936 + | glutamyl- and glutaminyl-tRNA synthetase TERM 886 612944 - 612989 + F 100 -18.5 -4.74801 | opp_overlap 612948 612951, overlap 612948 AAGGCTAATATTTGG TAAAGAAGCCGTGTGAGGGCT AGTT AGCCTTCATTCGGCTTCTTTG TTTTTGGTCGGATTA TERM 887 612985 - 612948 - f 100 -12.7 -3.57615 | opp_overlap 612948 612944, overlap 612951 CTAATATTTGGTAAA GAAGCCGTGTGAGGGCT AGTT AGCCTTCATTCGGCTTC TTTGTTTTTGGTCGG TERM 888 612948 - 612985 + F 100 -17.1 -4.91852 | opp_overlap 612948 612951, overlap 612944 CTAATATTTGGTAAA GAAGCCGTGTGAGGGCT AGTT AGCCTTCATTCGGCTTC TTTGTTTTTGGTCGG TERM 889 612982 - 612951 - f 77 -8.6 -3.91984 | opp_overlap 612948 612944, overlap 612948 ATATTTGGTAAAGAA GCCGTGTGAGGGCT AGTT AGCCTTCATTCGGC TTCTTTGTTTTTGGT TERM 890 613962 - 613974 + G 81 -7.7 -4.62441 | TGAAGACGGTGGATC CGCAA ACG TTGCG TTTCTTTATGTCGAC LVIS_0580 613091 - 614503 + | cysteinyl-tRNA synthetase LVIS_0581 614503 - 614910 + | ribonuclease III family protein LVIS_0582 614907 - 615674 + | rRNA methylase TERM 891 616276 - 616313 + F 100 -13 -5.30616 | gap 1 CTGGGGACACGCCCA GTCTTCCTTTAGACTAG AGTTA CTAG-CTAAAGGAGGAC TTTTTCTTTGACTGA LVIS_0584 616321 - 616890 + | ComX LVIS_0585 616965 - 617114 + | ribosomal protein L33 secE 617158 - 617334 + | preprotein translocase subunit SecE TERM 892 617392 - 617408 + F 95 -2.9 -6.11229 | ATTGGTAACAGGGAA CTTCGTG GAT TGCGGAG TTTTTTTATTTTGCT LVIS_0587 617459 - 618007 + | transcription antiterminator TERM 893 618122 - 618136 + F 73 -8.6 -3.65046 | GGTATGATTCTCAGG TATGCG TGA CGCATA TTGTTAACGTGGGAG TERM 894 618448 - 618420 - g 73 -10.3 -3.17229 | opp_overlap 618411, overlap 618418 ATTTCATCACCAAGA CTCCTCCAGCAGC AAC GCTGTTGAAGAAG GCTGCTGGTGTTGAA rplK 618206 - 618631 + | 50S ribosomal protein L11 rplA 618729 - 619427 + | 50S ribosomal protein L1 TERM 895 619586 - 619610 + F 100 -7.2 -5.60993 | overlap 619558 619557 619593 ACTTAAACTTTTGAC TCCTTATGTC TTGGT GGCATAGGGA TTTTTTTATCCCACC LVIS_0590 619650 - 620156 + | ribosomal protein L10 LVIS_0591 620205 - 620573 + | ribosomal protein L7/L12 TERM 896 620599 - 620618 + F 100 -6.4 -5.63504 | TTACGAAATAATGAA CTGCTATC TTCG GGTAGCGG TTTTTTTGTACAATT TERM 897 620812 - 620842 + F 86 -9.1 -4.3467 | gap 1, overlap 620814 620832 CCTTTAAGCGTCCCA TGCGGACTCAAGCT AAGT AGCT-GGGTCCGTA TTTTCGTGTCCAGAT TERM 898 620814 - 620840 + F 81 -9.5 -3.77806 | gap 1, overlap 620812 620832 TTTAAGCGTCCCATG CGGACTCAAGCT AAGT AGCT-GGGTCCG TATTTTCGTGTCCAG TERM 899 622524 - 622542 + G 73 -8.8 -3.80573 | TGATGCGCCGCGGAT GCGAGCAA TTA TTGCGCGC TTTGGTGGTAATGAG LVIS_0592 620947 - 623559 + | lysyl-tRNA synthetase (class II) TERM 900 623561 - 623616 + T 93 -12.1 -3.58329 | gap 1, opp_overlap 623561 623573, overlap 623566 623573 623576 GAGAAAATGAGTAAA GCGACTACAAAAGGATTCCCGTTCAG AGGTG CTGAACAGGAATTCTTTTGC-GTAGC TTAATTCTTAATTCG TERM 901 623616 - 623561 - T 100 -14.3 -3.94664 | gap 1, opp_overlap 623561 623566 623573 623576, overlap 623573 GAGAAAATGAGTAAA GCGACTACAAAAGGATTCCCGTTCAG AGGTG CTGAACAGGAATTCTTTTGC-GTAGC TTAATTCTTAATTCG TERM 902 623566 - 623612 + T 88 -12.5 -2.63501 | opp_overlap 623561 623573, overlap 623561 623573 623576 AATGAGTAAAGCGAC TACAAAAGGATTCCCGTTCAG AGGTG CTGAACAGGAATTCTTTTGCG TAGCTTAATTCTTAA TERM 903 623605 - 623573 - T 100 -11.4 -4.49344 | opp_overlap 623573 623566 623561 623576, overlap 623561 AAAGCGACTACAAAA GGATTCCCGTTCAG AGGTG CTGAACAGGAATTC TTTTGCGTAGCTTAA TERM 904 623573 - 623605 + T 100 -11.4 -4.21275 | opp_overlap 623561 623573, overlap 623566 623561 623576 AAAGCGACTACAAAA GGATTCCCGTTCAG AGGTG CTGAACAGGAATTC TTTTGCGTAGCTTAA TERM 905 623576 - 623602 + T 85 -9.5 -4.22214 | opp_overlap 623573 623561, overlap 623573 623566 623561 GCGACTACAAAAGGA TTCCCGTTCAG AGGTG CTGAACAGGAA TTCTTTTGCGTAGCT LVIS_0593 624202 - 623624 - | Rossmann fold nucleotide-binding protein LVIS_0594 624405 - 625319 + | 3-hydroxybutyryl-CoA dehydrogenase TERM 906 625432 - 625382 - T 100 -21.4 -3.54414 | opp_overlap 625382 625387, overlap 625387 ATTTGTAATTAAAGA TAAAATCCCCCGCCAATACAGCCA TAA TGGGTGTATCAGCGGGGGATTTTG TTAGCTTATTTACTT TERM 907 625382 - 625432 + T 100 -19.2 -3.35183 | opp_overlap 625382 625387, overlap 625387 ATTTGTAATTAAAGA TAAAATCCCCCGCCAATACAGCCA TAA TGGGTGTATCAGCGGGGGATTTTG TTAGCTTATTTACTT TERM 908 625427 - 625387 - T 100 -21.3 -4.84539 | opp_overlap 625382 625387, overlap 625382 TAATTAAAGATAAAA TCCCCCGCCAATACAGCCA TAA TGGGTGTATCAGCGGGGGA TTTTGTTAGCTTATT TERM 909 625387 - 625427 + T 100 -16.9 -4.74539 | opp_overlap 625387 625382, overlap 625382 TAATTAAAGATAAAA TCCCCCGCCAATACAGCCA TAA TGGGTGTATCAGCGGGGGA TTTTGTTAGCTTATT nrdF 626433 - 625438 - | ribonucleotide-diphosphate reductase subunit beta LVIS_0596 628633 - 626468 - | ribonucleotide-diphosphate reductase subunit alpha TERM 910 628715 - 628684 - R 91 -6.5 -5.43974 | overlap 628708 AAAATCAAATAAAAA TGACGCCACCGTG AACAAA CACGACGTCGCCA AGACGGGTTTGTGCC LVIS_0597 628969 - 628742 - | glutaredoxin-like protein TERM 911 628801 - 628788 - G 70 -2.3 -4.94992 | opp_overlap 628788, overlap 628789 CGAAACCCATAAAAA GCTGG TACA CCAGG TGCTTCGACCACTGG TERM 912 629096 - 629047 - H 100 -16.9 -5.29385 | opp_overlap 629051 629056 AATTCAATCAAAAAA GACACCATATTTGGTAGTT GAAACATACAAT AACTACCAAATATGGTGTC TGAACGACTAATCTT TERM 913 629051 - 629092 + H 77 -11.2 -2.87564 | opp_overlap 629047, overlap 629056 CAATCAAAAAAGACA CCATATTTGGTAGTTG AAACATACAA TAACTACCAAATATGG TGTCTGAACGACTAA LVIS_0598 629173 - 629784 + | 16S RNA G1207 methylase RsmC LVIS_0599 629801 - 630352 + | cytosine/adenosine deaminase TERM 914 630475 - 630495 + F 100 -11.9 -5.24989 | ATGAGCTAATTCCAA CTCCTAGTC ATT GACTGGGAG TTTTTTCATGTCTAA LVIS_0600 630629 - 632359 + | DNA polymerase III, gamma/tau subunit LVIS_0601 632381 - 632698 + | hypothetical protein LVIS_0602 632720 - 633319 + | recombinational DNA repair protein (RecF pathway) LVIS_0603 633337 - 633588 + | hypothetical protein TERM 915 633599 - 633623 + F 80 -5 -5.1287 | overlap 633601 ATTAATTGGTATTGA GACTTGAGAG GATTA TTCTCAAGCC TTTTTTGCGTGTCAG LVIS_0604 633786 - 634430 + | thymidylate kinase LVIS_0605 634457 - 634786 + | hypothetical protein TERM 916 635267 - 635298 + G 73 -2.4 -5.03314 | gap 1, overlap 635268 635282 AAAAATTTGATTTTG CCAACGATTCTGT CGCGAAC ACAG-ATCGTTGA TTTTTTGCGAGTAGC LVIS_0606 634796 - 635809 + | DNA polymerase III subunit delta' TERM 917 636028 - 636006 - g 73 -9.8 -3.38326 | GAGAACTTCAACGAA CGTTGCCGGA GGA CCCGGAAACG CCGCAGGGATTGTCT LVIS_0607 635831 - 636172 + | regulator of replication initiation timing LVIS_0608 636184 - 637065 + | methyltransferase LVIS_0609 637071 - 637811 + | Acyl-ACP thioesterase LVIS_0610 637990 - 638712 + | metal-dependent protease-like protein, putative molecular chaperone TERM 918 638886 - 638905 + G 71 -9.2 -3.53761 | TTTATGCTGGGAAGG CGCCCTGG GATG CCACGGCG TTTGCCAACGAATTG LVIS_0611 638696 - 639304 + | acetyltransferase TERM 919 639322 - 639295 - f 72 -6.3 -4.30014 | gap 1, opp_overlap 639296, overlap 639288 639296 GGTAGCAACCGAAAA GGACGAGTAGGC ACTTG GCC-ACTCGTCT TTTTGCGAGAAAATA TERM 920 639321 - 639296 - f 74 -9.8 -3.17526 | gap 1, opp_overlap 639296, overlap 639295 639288 GTAGCAACCGAAAAG GACGAGTAGGC ACTTG GCC-ACTCGTC TTTTTGCGAGAAAAT TERM 921 639296 - 639321 + F 100 -9.8 -4.56775 | gap 1, opp_overlap 639296 639295 639288 GTAGCAACCGAAAAG GACGAGTAGGC ACTTG GCC-ACTCGTC TTTTTGCGAGAAAAT LVIS_0612 639345 - 640388 + | metal-dependent protease with chaperone activity TERM 922 640467 - 640431 - T 100 -13.1 -3.54022 | opp_overlap 640436, overlap 640436 AAATCGCGATAAATA TAAAAGAGTGAGCCGGC CTA GCCAGTTCACTCTTTTT GTTAATCATAAATCG TERM 923 640436 - 640462 + T 100 -13 -5.15167 | opp_overlap 640431 640436 GCGATAAATATAAAA GAGTGAGCCGGC CTA GCCAGTTCACTC TTTTTGTTAATCATA TERM 924 640462 - 640436 - T 100 -13 -4.84918 | opp_overlap 640436, overlap 640431 GCGATAAATATAAAA GAGTGAGCCGGC CTA GCCAGTTCACTC TTTTTGTTAATCATA LVIS_0613 641647 - 640469 - | cyanate permease TERM 925 641522 - 641503 - G 73 -10 -3.29461 | GAATGGTGGTGATAA GCCCAGCT AATG AACTGGGC AGACCAATCGTTTGC LVIS_0614 642001 - 641705 - | transcriptional regulator TERM 926 642087 - 642069 - R 100 -12.4 -5.16572 | ACGCAATTTAAAAAA GCCACCCC AGG GGAGTGGC TAGAGAGACTAAGTG LVIS_0615 644062 - 642110 - | ABC transporter ATPase TERM 927 642984 - 642998 + g 70 -2.1 -4.84527 | gap 1 TTAGGCCCCACAATG GCGACC GCTT GGT-GC TTTTTGATGTCTAAG LVIS_0616 644295 - 644933 + | redox-sensing transcriptional repressor Rex TERM 928 644940 - 644963 + F 100 -8.2 -4.94972 | AAAGAATAATTGGAA GTCGTAATCG ATTG TGATTGCGAC TTTTTGGTTGTCATG groES 645114 - 645398 + | co-chaperonin GroES TERM 929 645485 - 645508 + G 73 -10.4 -3.21912 | gap 1, opp_overlap 645483, overlap 645489 AGTTCTCTGAAGACG CACGCAGCAAG ATG CTTGCTG-GTG TTGATAAATTAGCGA TERM 930 645489 - 645505 + G 72 -10.9 -2.5007 | opp_overlap 645483, overlap 645485 CTCTGAAGACGCACG CAGCAAG ATG CTTGCTG GTGTTGATAAATTAG groEL 645454 - 647079 + | chaperonin GroEL TERM 931 647154 - 647121 - f 78 -10.5 -3.31817 | gap 1, opp_overlap 647122, overlap 647125 647128 AAGCATTAAAGTGAA GGAAGAATCC-ACCAA AAT TTGGTAGGATTCTTCT TTTTTTGTCATTAGC TERM 932 647122 - 647153 + F 100 -14 -5.71983 | gap 1, opp_overlap 647121 647125 647128 AGCATTAAAGTGAAG GAAGAATCC-ACCAA AAT TTGGTAGGATTCTTC TTTTTTTGTCATTAG TERM 933 647150 - 647125 - f 78 -9.9 -3.43619 | gap 1, opp_overlap 647122, overlap 647121 647128 ATTAAAGTGAAGGAA GAATCC-ACCAA AAT TTGGTAGGATTC TTCTTTTTTTGTCAT TERM 934 647341 - 647313 - f 91 -8.3 -4.73682 | gap 1, opp_overlap 647310 647313 CTGGATAATAGAAAA GTTCGCAAACAC ATTCGG GTG-TTGCGAAC TGCTTGAATTGTGGT TERM 935 647421 - 647436 + F 87 -8.2 -4.43037 | AATGTGCACTTATTG GCGGGT TACG GCCCGC TTTCATTTTTATTGG TERM 936 648390 - 648421 + G 75 -10.2 -3.3506 | gap 1 TGCAATTATCAACGG CCCTGATTTTGGCGG TTG CCGCTAATA-CAGGG TTCTCAGCATTTCCA LVIS_0619 647471 - 649306 + | amino acid transporter TERM 937 649368 - 649325 - T 100 -11.1 -4.28548 | opp_overlap 649330, overlap 649330 AGTTACTCAGCAAAA TAAAATGGGATCACCAGGC GTTAAT GGCTGGTGGTCCCATTTTT TAATGCCGGAAAACA TERM 938 649363 - 649330 - T 100 -11 -5.13722 | opp_overlap 649330, overlap 649325 CTCAGCAAAATAAAA TGGGATCACCAGGC GTTAAT GGCTGGTGGTCCCA TTTTTTAATGCCGGA TERM 939 649330 - 649363 + T 100 -13.9 -5.14563 | opp_overlap 649330 649325 CTCAGCAAAATAAAA TGGGATCACCAGGCG TTAA TGGCTGGTGGTCCCA TTTTTTAATGCCGGA TERM 940 649519 - 649541 + T 95 -11.3 -3.76839 | opp_overlap 649519 AAGTGTAAAGAAAAA CACCGGCCT CAATT AGGTCGGTG TTTAGATTGAAATTA TERM 941 649541 - 649519 - T 100 -9.1 -5.29846 | opp_overlap 649519 AAGTGTAAAGAAAAA CACCGGCCT CAATT AGGTCGGTG TTTAGATTGAAATTA LVIS_0620 650366 - 649560 - | putative effector of murein hydrolase LVIS_0621 650851 - 650411 - | putative effector of murein hydrolase LrgA TERM 942 651468 - 651488 + G 85 -11.1 -3.92542 | opp_overlap 651466 TTACGCGATCAGATG CCCACACAG CAA CTGTGGGGG TTGTTTGGCGGTGAA LVIS_0622 651258 - 652352 + | UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase TERM 943 652391 - 652359 - T 100 -16.3 -3.79787 | opp_overlap 652359 TCAGATTAAGCCAAA GAGGCGTCTCAGAAG TTA CTTCTGGGGCGCCTC TTTATATCTGGATGT TERM 944 652359 - 652391 + T 100 -20.7 -4.14392 | opp_overlap 652359 TCAGATTAAGCCAAA GAGGCGTCTCAGAAG TTA CTTCTGGGGCGCCTC TTTATATCTGGATGT LVIS_0623 653065 - 652406 - | hypothetical protein TERM 945 654042 - 654056 + G 77 -2.7 -5.34055 | GATTCAGCACTTCTT GACCG AACGA CGGCC TTTTTTGATATTTGT LVIS_0624 653140 - 654459 + | superfamily II DNA/RNA helicase TERM 946 655079 - 655060 - g 95 -13.6 -3.7918 | opp_overlap 655057 ATACCACAGGAAGAA CGTTGCGG CATG CCGCAACG CAAATTAATTTGACC LVIS_0625 654456 - 655133 + | amidophosphoribosyltransferase TERM 947 655156 - 655146 - f 80 -2.6 -5.45726 | opp_overlap 655146 655146 TAGAGCGGAAAAAAA TAAT TAG ATTA ATTGTGTCTGGTCAC LVIS_0626 655270 - 655830 + | ribosome-associated protein Y (PSrp-1) TERM 948 655849 - 655868 + F 100 -11.4 -5.33866 | opp_overlap 655849 AAATCAGTTTACGAA GCATCGCG TTTA CGCGGTGC TTTTTTGTCGATTTA TERM 949 655868 - 655849 - f 72 -9.2 -3.17956 | opp_overlap 655849 AAATCAGTTTACGAA GCATCGCG TTTA CGCGGTGC TTTTTTGTCGATTTA TERM 950 656157 - 656136 - g 75 -10.3 -3.38272 | GACGACTACGCACAA CTTTCAGAT GATG ATCTGAAAG CGAAAACGCCTGAGT TERM 951 657226 - 657244 + G 73 -8.8 -3.83026 | opp_overlap 657219 CGAACAAGCCAGTTG TCCGGGTC GAT GAACCGGA TTTGCTGTACCCAAC secA 656031 - 658394 + | preprotein translocase subunit SecA TERM 952 658401 - 658438 + F 73 -8.6 -3.59979 | gap 2, opp_overlap 658384 658407, overlap 658407 ACCCGTTAAACGGGC GACGAA-CGAGG-CGGGA AGTT TTCCGACCTCGTTTTGTC TTTAAAATAACACAA TERM 953 658431 - 658407 - f 79 -10.7 -3.16055 | opp_overlap 658401 658407 TAAACGGGCGACGAA CGAGGCGGGAA GTT TTCCGACCTCG TTTTGTCTTTAAAAT TERM 954 658407 - 658431 + F 100 -8.6 -4.79451 | gap 1, opp_overlap 658407, overlap 658401 TAAACGGGCGACGAA CGAGG-CGGGA AGTT TTCCGACCTCG TTTTGTCTTTAAAAT LVIS_0628 658471 - 658545 + | hypothetical protein LVIS_0629 658556 - 659587 + | protein chain release factor B TERM 955 659614 - 659640 + F 100 -17.4 -5.34309 | AATCGAACGGTTAGA CGGGTAACGCGA ATG TCGTGTTACCCG TTTTTATTTCATGCT TERM 956 659858 - 659868 + G 71 -6.8 -4.1466 | ACGGCATATGCTGAC GCAG GGA CTGC TTTTAGGCCTTGGCT TERM 957 660116 - 660127 + G 73 -2.2 -5.06961 | CCAAAATTACTTCTG GCTA GCCT TGGC TTTCTTTTTGTTGAT TERM 958 660268 - 660299 + G 71 -7.2 -4.11773 | overlap 660261 660293 CAATGGTGACGCTGG TTCCCGGCGATTGG ATCA CCAGTCACTGGGCA TTTTGGCCGGTCTTT LVIS_0630 659697 - 660851 + | trypsin-like serine protease LVIS_0631 660856 - 661563 + | DNA-binding response regulator TERM 959 662661 - 662628 - g 78 -12.5 -2.63614 | gap 1, overlap 662625 662624 662633 ATTAAGTACAATCGA CCACAGGGGCGGGTGA CCG TCACC-GCCACTGTGA CAGCCCACGATTGGC LVIS_0632 661560 - 662903 + | Signal transduction histidine kinase TERM 960 662916 - 662941 + F 81 -5.3 -5.19879 | TAATCGCTAAATGAC GAGTCGGAGAC AAAA GCCTCGGGCTC TTTTTGTGTTTCCAA LVIS_0633 663155 - 664036 + | ABC-type phosphate transport system, periplasmic component LVIS_0634 664037 - 664963 + | ABC-type phosphate transport system, permease component TERM 961 665006 - 664983 - g 100 -9 -4.89567 | gap 1, opp_overlap 664987, overlap 664987 TTCCAAAACACAAAA TAAAGTC-GCC ATT GGCGGACTTTA CGGCATTGCGGGCCT TERM 962 665002 - 664987 - g 78 -5.4 -4.93812 | gap 1, opp_overlap 664987, overlap 664983 AAAACACAAAATAAA GTC-GCC ATT GGCGGAC TTTACGGCATTGCGG LVIS_0635 664963 - 665847 + | ABC-type phosphate transport system, permease component LVIS_0636 665860 - 666684 + | ABC-type phosphate transport system, ATPase component LVIS_0637 666700 - 667458 + | ABC-type phosphate transport system, ATPase component LVIS_0638 667470 - 668150 + | phosphate uptake regulator TERM 963 668189 - 668220 + F 70 -7.3 -3.79071 | opp_overlap 668190, overlap 668190 TGAAGATTTACGACA ACGGTCACTGAAG ACTTGC TTTCAGTGGCCGC TTTCGCTATTCTGAG TERM 964 668190 - 668219 + F 77 -10.8 -2.86961 | opp_overlap 668190, overlap 668189 GAAGATTTACGACAA CGGTCACTGAAG ACTTGC TTTCAGTGGCCG CTTTCGCTATTCTGA LVIS_0639 668344 - 668673 + | putative stress-responsive transcriptional regulator LVIS_0640 668674 - 669045 + | hypothetical protein LVIS_0641 669134 - 670069 + | HPr kinase/phosphorylase TERM 965 670592 - 670623 + G 83 -6.6 -4.99035 | opp_overlap 670592 670593, overlap 670593 GGATTATTAGTCAAA TGTTGATTAACGGT GCCT ACCGTCAACCAACG TTTTTGTATGAATCC TERM 966 670623 - 670592 - g 71 -8.8 -3.69323 | opp_overlap 670592 670593, overlap 670593 GGATTATTAGTCAAA TGTTGATTAACGGT GCCT ACCGTCAACCAACG TTTTTGTATGAATCC TERM 967 670622 - 670593 - g 80 -12.3 -2.81272 | opp_overlap 670593 670592, overlap 670592 GATTATTAGTCAAAT GTTGATTAACGGT GCCT ACCGTCAACCAAC GTTTTTGTATGAATC LVIS_0642 670075 - 670938 + | prolipoprotein diacylglyceryl transferase LVIS_0643 670954 - 671967 + | glycerol-3-phosphate dehydrogenase LVIS_0644 672005 - 672910 + | UDP-glucose pyrophosphorylase TERM 968 673833 - 673819 - g 71 -2.8 -4.83615 | GACGTGCGACAAAAA GATTTG CGG CAGATC ACCACGGCGGTTGGC LVIS_0645 672982 - 673923 + | thioredoxin reductase TERM 969 673935 - 673963 + F 95 -7.5 -5.44721 | gap 1, opp_overlap 673935 ATAATGGTAAACTTA GCGGAGACAACC TTAACC GGT-GTTTCCGC TTTTTTTGCGGTCGT TERM 970 674609 - 674582 - g 73 -7.6 -3.96892 | AAGTCTTACCAGAAA TGCTGGCCGCTG ATTT CAGTGACCGGCA GAAGCTGGCACAACT LVIS_0646 674017 - 674658 + | HD superfamily hydrolase LVIS_0647 674655 - 675179 + | acetyltransferase TERM 971 675232 - 675256 + F 100 -17.3 -4.4767 | opp_overlap 675223 675224 AGAATATTTGAGCAC GATGGGAAACG AGC CGTTTCCCATC TTTTCTGATGAATAA LVIS_0648 675296 - 677302 + | excinuclease ABC subunit B TERM 972 677622 - 677593 - g 73 -2.1 -5.1675 | overlap 677606 677607 CGATTGACCAAAAAA CCACGTCTAAG AACCCGCG CTCAACCGTGG GAACGGTGACTGAAA TERM 973 678389 - 678409 + G 76 -9.9 -3.71607 | opp_overlap 678388 678387 ACAAGGTAAGGAATT TCATTTTCA TTA TGAAAATGA TTTCGGTGGTGTTCG TERM 974 679421 - 679434 + G 71 -3.8 -4.79223 | ACGGAGTAATCCAGC CACC TATACC GGTG TTTTTGATGATGTCC LVIS_0649 677322 - 680177 + | excinuclease ATPase subunit TERM 975 680192 - 680213 + F 100 -10.1 -5.13473 | overlap 680210 GATTGTTAAAGATGG GGCCGTGGC GAGA GTCATGGCC TTTTTTAGGTCTACT TERM 976 680311 - 680293 - f 73 -7.4 -4.20712 | opp_overlap 680291 680293 TACAATAGTTGAAAA CCGGTC GTCATGT GACCGG TGTTGTGAGGAGATG LVIS_0650 680333 - 680878 + | hypothetical protein TERM 977 680886 - 680919 + F 100 -7.5 -5.60993 | opp_overlap 680886 GCTCCTAAATTAAAC CGCTATGGTGTGT GCTTGTTA GCGCATCATAGCG TTTTTTTGTGGAAAA LVIS_0651 681025 - 681909 + | hypothetical protein TERM 978 682622 - 682602 - g 78 -6.1 -4.68994 | ATCATGACCCAAAAA GGGGAAACC GAA AGTTTCTCC GATGCTGACCATGTT LVIS_0652 681906 - 682916 + | hypothetical protein LVIS_0653 682919 - 683857 + | hypothetical protein TERM 979 683896 - 683864 - T 100 -22.3 -4.18197 | opp_overlap 683864 ACGGCCTAGTTAAAA GACCAGTCAATCGTT TTA AACGATTGACTGGTC TTTTTGTCGTAATTG TERM 980 683864 - 683896 + T 100 -22.3 -4.94902 | opp_overlap 683864 ACGGCCTAGTTAAAA GACCAGTCAATCGTT TTA AACGATTGACTGGTC TTTTTGTCGTAATTG TERM 981 683965 - 683946 - T 100 -7.8 -5.63857 | opp_overlap 683946 AAAAACGCAAAAAAA GCGCCGTC GAAT GACGACAC TTTTGGGGTTAATCA clpP 684577 - 683981 - | ATP-dependent Clp protease proteolytic subunit LVIS_0655 684847 - 685293 + | response regulator LVIS_0656 685299 - 686012 + | hypothetical protein TERM 982 686182 - 686206 + T 100 -7.1 -5.7946 | CCAGGCGCATCAGTG GTCGTGACGTT GTT GACGTTGCGGC TTTTTTTGTTGCCAA TERM 983 686218 - 686253 + T 100 -13.4 -3.61983 | opp_overlap 686226 CGGCTTTTTTTGTTG CCAAAAAACTGCGATG AAAT CATCGCAGTTACTTGG TTGTCTGTGGCTTAA TERM 984 686245 - 686226 - T 100 -12.2 -5.00616 | opp_overlap 686218 TTTGTTGCCAAAAAA CTGCGATG AAAT CATCGCAG TTACTTGGTTGTCTG LVIS_0658 686857 - 686246 - | hypothetical protein TERM 985 687058 - 687077 + H 100 -5.7 -5.93809 | CGGGCGCATCGGTAA GTCGAGA GGATGA TCTCGGC TTTTTTTTGTGCAAA TERM 986 688089 - 688101 + G 73 -3.3 -4.93296 | overlap 688058 CCCATGCGGTCGGAG AAGCC TTT GGCTA TTTTTATGATGCTGA LVIS_0660 687278 - 688306 + | central glycolytic genes regulator TERM 987 688404 - 688418 + G 93 -12.8 -3.84451 | TGGTATTAATGGTTT CGGCCG TAT CGGCCG TTTAGCTTTCAAGCG LVIS_0661 688375 - 689385 + | glyceraldehyde-3-phosphate dehydrogenase TERM 988 689420 - 689462 + F 100 -15.7 -3.21912 | opp_overlap 689416 689426, overlap 689426 TTTTAAAATAAGACT CACGAACGTGGCGGAGGGA GGTAA TTTCTCCGCCACGTTTTTG TTAGTCGATTAAAAA TERM 989 689426 - 689456 + F 100 -15.5 -5.14163 | opp_overlap 689416 689426, overlap 689420 AATAAGACTCACGAA CGTGGCGGAGGGA GGTAA TTTCTCCGCCACG TTTTTGTTAGTCGAT TERM 990 689456 - 689426 - f 79 -11.2 -3.23296 | opp_overlap 689426 689420, overlap 689416 AATAAGACTCACGAA CGTGGCGGAG GGAGGTAATTT CTCCGCCACG TTTTTGTTAGTCGAT pgk 689564 - 690766 + | phosphoglycerate kinase TERM 991 690778 - 690800 + F 100 -8.4 -5.24416 | opp_overlap 690778 ATAAATTAATGAAGA GCTGTGGTGG GTG TCACCATGGC TTTTTGTTGTGATTG LVIS_0663 690911 - 691669 + | triosephosphate isomerase LVIS_0664 691777 - 693096 + | enolase TERM 992 693114 - 693141 + F 100 -11.4 -6.01369 | opp_overlap 693114 693117 CAAAGTGAAAATGAA GAAGCAGACTCA GTGA TGGGTTTGCTTC TTTTTTTGTTGTTTG TERM 993 693571 - 693558 - g 73 -4.5 -4.71426 | CGTTGATGAACAAAA GACCG TTGT CAGTC AGCGTGAATCAAAGG TERM 994 693650 - 693672 + G 70 -9.9 -3.14132 | opp_overlap 693640 ACCAACTGGCGGCCT CGCAAGTCG CTGAA CGATTTGCG TTACTGCCGGAAGAC LVIS_0665 693211 - 694317 + | hypothetical protein TERM 995 694409 - 694452 + G 71 -9.1 -3.56099 | overlap 694412 GAACACAGCATGATC TAACCCGATTAAATGCC ATTGTTTTGG GGTGTTTAGTCGGGTTA TTTGCCGGAATTGTC TERM 996 694858 - 694877 + G 71 -7 -4.07687 | overlap 694846 694846 694859 ATAGCCAGCGGGGCT TCCGCGGG ACTT TCCGCGGC TTTTAACGCACCAAT TERM 997 694859 - 694876 + G 72 -10.5 -3.04398 | overlap 694846 694846 694858 TAGCCAGCGGGGCTT CCGCGGG ACTT TCCGCGG CTTTTAACGCACCAA TERM 998 695351 - 695362 + G 74 -4.4 -4.86033 | overlap 695341 695340 695354 695355 GCTATGGCTCGGGGC TACC GGGC GGTA TTTTTCTGCCCATTT LVIS_0666 694378 - 695934 + | chloride channel protein EriC secG 696031 - 696267 + | preprotein translocase subunit SecG TERM 999 696280 - 696306 + F 89 -7.3 -5.02074 | TAGAGTAAAATGTGG GCCTCCTGT TTGTTTGTT ACAGGGGGC TTTTTTACAGAGTAA TERM 1000 696389 - 696368 - g 74 -9.4 -3.68366 | TGATTCGAAAACCAA CCCCGCTC TTCTTT GAGCAGGG ACCTCAAGCAGTGAT LVIS_0668 696352 - 697110 + | esterase/lipase TERM 1001 699295 - 699329 + G 75 -10.6 -3.28712 | overlap 699296 CCGGTCAGCGACTTA CTGCCGCATCGTGAGC ATC GCTCACGTGGTGGCAA TTATCACGGGCGGAG TERM 1002 699296 - 699328 + G 87 -14.1 -2.57132 | overlap 699295 CGGTCAGCGACTTAC TGCCGCATCGTGAGC ATC GCTCACGTGGTGGCA ATTATCACGGGCGGA LVIS_0669 697114 - 699507 + | exoribonuclease R smpB 699523 - 699996 + | SsrA-binding protein TERM 1003 700005 - 700039 + F 100 -13.7 -5.14563 | opp_overlap 700008 700015 TTATTAATACTGAGA GGAGACAACAGAACG TGGTT CGTTTGGTTGTCTCC TTTTTTCATCGGGAG LVIS_0671 700065 - 700802 + | ABC-type polar amino acid transport system, ATPase component TERM 1004 700886 - 700842 - T 100 -8.7 -5.41359 | opp_overlap 700842, overlap 700845 AAGGAAACTAAAAAA TAATCGCTATTTTCAGAAAGC CAC GAATTCTGAAGATAGCGATTG TTTTTATTAATATCA TERM 1005 700842 - 700886 + T 100 -13.1 -5.16841 | opp_overlap 700842 700845 AAGGAAACTAAAAAA TAATCGCTATTTTCAGAAAGC CAC GAATTCTGAAGATAGCGATTG TTTTTATTAATATCA TERM 1006 700883 - 700845 - T 100 -10.4 -4.76088 | opp_overlap 700842, overlap 700842 GAAACTAAAAAATAA TCGCTATTTTCAGAAAGC CAC GAATTCTGAAGATAGCGA TTGTTTTTATTAATA LVIS_0672 701474 - 700905 - | hypothetical protein LVIS_0673 701598 - 702317 + | uracil-DNA glycosylase eutD 702374 - 703348 + | phosphotransacetylase TERM 1007 703362 - 703394 + F 79 -8.4 -4.09519 | overlap 703364 AACGGATAAAAGAGG TGCCCGGATTGCGA TTTAT TAGCGGTCCGGGTA TTATTTATGGGTAAT TERM 1008 703364 - 703392 + F 75 -8.8 -3.63766 | overlap 703362 CGGATAAAAGAGGTG CCCGGATTGCGA TTTAT TAGCGGTCCGGG TATTATTTATGGGTA LVIS_0675 703442 - 703915 + | ATPase or kinase LVIS_0676 703908 - 704426 + | acetyltransferase LVIS_0677 704440 - 705462 + | Aryl-alcohol dehydrogenase related enzyme TERM 1009 705509 - 705476 - T 100 -9.1 -5.16237 | gap 1, opp_overlap 705476 AATGTGATCAAAAAA CTAGTATC-GCCAA AAATAAA TTGGCAGATACTAG TTTTTTAATATATAG TERM 1010 705476 - 705509 + T 100 -9.1 -5.24989 | gap 1, opp_overlap 705476 AATGTGATCAAAAAA CTAGTATC-GCCAA AAATAAA TTGGCAGATACTAG TTTTTTAATATATAG LVIS_0678 706080 - 705544 - | DNA polymerase III, epsilon subunit related 3'-5' exonuclease LVIS_0679 706870 - 706106 - | exonuclease III LVIS_0680 706869 - 707000 + | hypothetical protein murB 707045 - 707959 + | UDP-N-acetylenolpyruvoylglucosamine reductase LVIS_0682 707976 - 710108 + | NhaP-type Na+/H+ and K+/H+ antiporter TERM 1011 710116 - 710144 + T 100 -15.3 -4.70266 | opp_overlap 710116 ATGGCTAAATAAAAA CTCGGTGGTCCCT GAT GGGGGTCACCGAG TTTTTGGATGGTGTT TERM 1012 710144 - 710116 - T 100 -10.2 -5.27938 | opp_overlap 710116 ATGGCTAAATAAAAA CTCGGTGGTCCC TGATG GGGGTCACCGAG TTTTTGGATGGTGTT LVIS_0683 710824 - 710162 - | hypothetical protein LVIS_0684 711073 - 711924 + | hypothetical protein LVIS_0685 711924 - 712892 + | hypothetical protein TERM 1013 713777 - 713764 - g 70 -2.3 -5.00616 | GGCCGTCTGAAAAAA GACAC GATT GTGAC GACGGTGATGAGTAA LVIS_0686 712924 - 714279 + | phosphomannomutase TERM 1014 714296 - 714316 + F 100 -13.3 -5.36441 | GTAAAGATGTTTGTG TGGCGGGGA TGG TTCCCGCCA TTTTTTGTGTCCAAA TERM 1015 715745 - 715726 - g 77 -8.6 -4.15106 | opp_overlap 715740 CACCAATGTGCAAAA CTCCACGT TATC ACGTGAAG CCACTTACACCTTGT LVIS_0687 714593 - 716410 + | D-fructose-6-phosphate amidotransferase TERM 1016 716427 - 716448 + F 100 -12.3 -5.59879 | opp_overlap 716427 TAGATAAGTTGAAAA GGTCGAGAC AATT GTCTCGGCC TTTTTTGTGTTTATG TERM 1017 716448 - 716427 - f 88 -10.1 -4.23007 | opp_overlap 716427 TAGATAAGTTGAAAA GGTCGAGAC AATT GTCTCGGCC TTTTTTGTGTTTATG TERM 1018 716584 - 716571 - g 71 -4.5 -4.62002 | overlap 716572 ATGAAGTATACAAAA CGGGT GGAT ACCCA TAAGAACCAGAAACA LVIS_0688 716556 - 716678 + | hypothetical protein TERM 1019 716681 - 716703 + F 100 -7.7 -5.68438 | gap 1, opp_overlap 716679 TCGTCGGAAATAGCG GCGGT-TGCC ATGT GGCAGGCCGC TTTTTTATTTGATAA LVIS_0689 716804 - 717526 + | glucosamine-6-phosphate isomerase LVIS_0690 717629 - 719062 + | muramidase (flagellum-specific) TERM 1020 719085 - 719129 + T 100 -14.6 -2.5751 | opp_overlap 719085 719090, overlap 719090 CATAACTGGAACAAG TAAAAGGGTTTCTCGGAATT AAGCA GATTCTGAGAAGCCCTTTTG GTGTTGTAATAATGT TERM 1021 719124 - 719090 - T 78 -7.2 -4.56133 | opp_overlap 719090 719085, overlap 719085 CTGGAACAAGTAAAA GGGTTTCTCGGAAT TAAGCAG ATTCTGAGAAGCCC TTTTGGTGTTGTAAT TERM 1022 719090 - 719124 + T 100 -12.3 -4.47259 | opp_overlap 719085 719090, overlap 719085 CTGGAACAAGTAAAA GGGTTTCTCGGAATT AAGCA GATTCTGAGAAGCCC TTTTGGTGTTGTAAT LVIS_0691 721056 - 719155 - | cation transport ATPase TERM 1023 720581 - 720563 - G 76 -11.8 -2.75712 | overlap 720560 TCATTGACGTAACCA GTACCATC TGT GATGGTAC CATCAACGGGGATTT TERM 1024 721259 - 721213 - R 93 -14 -2.52208 | opp_overlap 721213 721218, overlap 721218 AAATTATGGACGAAC CAAAATGCCCCTAAATGGCC AATCAAA GATCATTTAGGGGCATTTTA CTATTATTGATAACT TERM 1025 721213 - 721259 + r 83 -11.8 -2.66517 | opp_overlap 721213 721218, overlap 721218 AAATTATGGACGAAC CAAAATGCCCCTAAATGGCC AATCAAA GATCATTTAGGGGCATTTTA CTATTATTGATAACT TERM 1026 721254 - 721218 - R 100 -11.7 -4.45945 | opp_overlap 721213 721218, overlap 721213 ATGGACGAACCAAAA TGCCCCTAAATGGCC AATCAAA GATCATTTAGGGGCA TTTTACTATTATTGA TERM 1027 721218 - 721254 + r 100 -11.7 -4.49937 | opp_overlap 721218 721213, overlap 721213 ATGGACGAACCAAAA TGCCCCTAAATGGCC AATCAAA GATCATTTAGGGGCA TTTTACTATTATTGA TERM 1028 721425 - 721452 + r 84 -6.2 -4.98531 | gap 1, opp_overlap 721426, overlap 721426 TGGGCTAACAAAAAA ACGACGCCG-CCT CAC AGGACGTCGTCGC TTTTTGATTTAGGGG TERM 1029 721451 - 721426 - R 100 -9.7 -5.7946 | gap 1, opp_overlap 721425 721426 GGGCTAACAAAAAAA CGACGCCG-CCT CAC AGGACGTCGTCG CTTTTTGATTTAGGG TERM 1030 721426 - 721451 + r 80 -9.7 -3.58396 | gap 1, opp_overlap 721426, overlap 721425 GGGCTAACAAAAAAA CGACGCCG-CCT CAC AGGACGTCGTCG CTTTTTGATTTAGGG LVIS_0692 722025 - 721474 - | DNA-binding ferritin-like protein (oxidative damage protectant) LVIS_0693 722283 - 722056 - | copper chaperone LVIS_0694 722553 - 723638 + | ABC-type polysaccharide/polyol phosphate transport system, ATPase component TERM 1031 723775 - 723797 + F 100 -12 -4.7629 | AAGACTAAATGGTGG GGGCTGGAAG TTA TTTCCGGCCC TTTTTGCGTTGATGA TERM 1032 723972 - 723994 + F 100 -9.9 -5.28831 | TCTCTCTTATGCCGA CCACTGCCA TTCCC TGGTAGTGG TTTTGTTTTGTTCGT LVIS_0695 724050 - 724358 + | hypothetical protein TERM 1033 724388 - 724414 + F 91 -5.2 -5.58454 | TTACTTAAACCGTAA CTAGGGATCT TGTTGGT AGATCCTTGG TTTTTTTGGTATGGA LVIS_0696 724585 - 725322 + | cell surface protein TERM 1034 725350 - 725383 + F 100 -11.2 -4.55721 | gap 1, opp_overlap 725332 725353 CAACCGTGACGGTGA CAACGAGATCAAGAC GTCTA GTCT-GGTCTCGTTG TTTTGTCTAGCATTT LVIS_0697 725427 - 726617 + | cell surface protein LVIS_0698 726601 - 727371 + | cell surface protein LVIS_0699 727384 - 728277 + | ABC-type Fe3+-hydroxamate transport system, periplasmic component LVIS_0700 728274 - 729242 + | ABC-type Fe3+-siderophore transport system, permease component LVIS_0701 729223 - 729981 + | ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component TERM 1035 730038 - 730002 - T 85 -5.9 -5.22039 | opp_overlap 730002 GTGAAATTTAAAAAA TGAGTACCCGCGAAA TGAAAGG TTTCGTAGGTGCTCA TTTTTAGTTGGTCAA TERM 1036 730002 - 730038 + T 100 -8.8 -4.90266 | opp_overlap 730002 GTGAAATTTAAAAAA TGAGTACCCGCGAAAT GAAAG GTTTCGTAGGTGCTCA TTTTTAGTTGGTCAA LVIS_0702 730985 - 730050 - | exopolyphosphatase LVIS_0703 733149 - 730987 - | polyphosphate kinase LVIS_0704 734684 - 733146 - | exopolyphosphatase LVIS_0705 735527 - 734706 - | LPS biosynthesis protein LVIS_0706 736119 - 735547 - | hypothetical protein LVIS_0707 736253 - 736696 + | transcriptional regulator LVIS_0708 736755 - 736928 + | hypothetical protein TERM 1037 736971 - 736937 - T 100 -15.8 -4.74103 | opp_overlap 736937 GCGTTAACGTAAAAA GCAACAACTCGCTGGT AGG ACTAGCGGGTTGTTGC TTTTTTAGCGTTAAT TERM 1038 736937 - 736971 + T 100 -20.2 -5.10029 | opp_overlap 736937 GCGTTAACGTAAAAA GCAACAACTCGCTGGT AGG ACTAGCGGGTTGTTGC TTTTTTAGCGTTAAT LVIS_0709 737435 - 736986 - | redox protein, regulator of disulfide bond formation LVIS_0710 737803 - 737982 + | hypothetical protein LVIS_0711 738075 - 738191 + | hypothetical protein TERM 1039 738216 - 738248 + T 100 -9.2 -5.08824 | gap 1, opp_overlap 738216 GCAATTGAACTTAAA TACGTGCGGCA-CCT GTAA AGGATACCGCGCGTA TTTTTTGAATGAAAA TERM 1040 738248 - 738216 - T 81 -9.2 -3.78409 | gap 1, opp_overlap 738216 GCAATTGAACTTAAA TACGTGCGGCA-CCT GTAA AGGATACCGCGCGTA TTTTTTGAATGAAAA TERM 1041 738295 - 738271 - T 100 -8.6 -5.85244 | AATGAAAATAAAAAA GCTAGTTACG ATGGA CGCAACCAGC AGAATAGAGGTATGT LVIS_0712 738826 - 738455 - | hypothetical protein LVIS_0713 739050 - 739544 + | hypothetical protein TERM 1042 739608 - 739572 - f 70 -7.4 -3.89875 | gap 1, opp_overlap 739582, overlap 739581 AACAGAATAATAGAA GCCAAAAAAGGGTCGCC ATTG GGCGATC-TTTTTTGGT GGAGAATAATGTTTG TERM 1043 739600 - 739581 - f 75 -3.4 -5.20154 | opp_overlap 739582, overlap 739572 ATAGAAGCCAAAAAA GGGTCGCC ATTG GGCGATCT TTTTTGGTGGAGAAT TERM 1044 739582 - 739599 + F 100 -9.1 -5.14563 | opp_overlap 739581 739572 TAGAAGCCAAAAAAG GGTCGCC ATTG GGCGATC TTTTTTGGTGGAGAA fumC 739680 - 741065 + | fumarate hydratase TERM 1045 741083 - 741104 + F 81 -7.3 -4.67353 | GAGATTTAACCTTAA GCCAGCT CGAGCAGA AGCTGGC TTTTTCAATCAGTCA TERM 1046 741493 - 741475 - g 73 -7.4 -4.21402 | ATCTAAAACTAGAAA CGGTGTCA GCC CAACACCG AGAAATTGACGAGAC LVIS_0715 741393 - 742748 + | acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein TERM 1047 742810 - 742772 - T 95 -12.7 -3.28119 | opp_overlap 742777, overlap 742777 ATGTAGTGATATTAA TAAAACGCTGACTCC ATACTTAGA GGAATCAGCGTTTTA TTAAGGAATCAAGAA TERM 1048 742805 - 742777 - T 100 -8.2 -4.75472 | opp_overlap 742777, overlap 742772 GTGATATTAATAAAA CGCTGACTCC ATACTTAGA GGAATCAGCG TTTTATTAAGGAATC TERM 1049 742777 - 742805 + T 75 -6 -4.63932 | opp_overlap 742772 742777 GTGATATTAATAAAA CGCTGACTCC ATACTTAGA GGAATCAGCG TTTTATTAAGGAATC LVIS_0716 743878 - 742955 - | IS30 family transposase LVIS_0717 743896 - 744144 + | hypothetical protein TERM 1050 744174 - 744158 - T 70 -3.7 -4.83169 | opp_overlap 744159, overlap 744159 AGTTTGCCATAAAAA GTGCATT TCG AATGCAT CATCTAGGAACACTA LVIS_0718 744546 - 744187 - | hypothetical protein TERM 1051 745797 - 745810 + G 71 -6.7 -4.24534 | AATTAAGGTTCGTCA CCTTG AAAG CAAGG TTTCTGTGTTACTTG LVIS_0719 745165 - 746346 + | cyclopropane fatty acid synthase-like protein LVIS_0720 746739 - 746491 - | hypothetical protein TERM 1052 746560 - 746618 + g 100 -29.4 -2.53249 | opp_overlap 746564 746571, overlap 746564 746571 TAACAGAATTAGGGA CCAATATAAAAGAGGTTCAGGTGCGTCT AGG ACACGCACCTGAACCTCTTTTATATTAG CTCTATTATCTAGAA TERM 1053 746564 - 746614 + g 100 -28.8 -3.21034 | opp_overlap 746564 746571, overlap 746560 746571 AGAATTAGGGACCAA TATAAAAGAGGTTCAGGTGCGTCT AGG ACACGCACCTGAACCTCTTTTATA TTAGCTCTATTATCT TERM 1054 746614 - 746564 - G 100 -28.8 -3.20703 | opp_overlap 746564 746560 746571, overlap 746571 AGAATTAGGGACCAA TATAAAAGAGGTTCAGGTGCGTCT AGG ACACGCACCTGAACCTCTTTTATA TTAGCTCTATTATCT TERM 1055 746607 - 746571 - G 100 -22.5 -4.70583 | opp_overlap 746571 746564 746560, overlap 746564 GGGACCAATATAAAA GAGGTTCAGGTGCGTCT AGG ACACGCACCTGAACCTC TTTTATATTAGCTCT TERM 1056 746571 - 746607 + g 100 -22.5 -4.69326 | opp_overlap 746564 746571, overlap 746564 746560 GGGACCAATATAAAA GAGGTTCAGGTGCGTCT AGG ACACGCACCTGAACCTC TTTTATATTAGCTCT TERM 1057 746835 - 746822 - R 71 -3.1 -4.91712 | overlap 746792 TCGAACCGAGAAAAA GTACC AGAA AGTAC CAGATAGAAGCTTTA LVIS_0721 747099 - 746848 - | hypothetical protein TERM 1058 747400 - 747371 - R 100 -10.1 -5.02439 | opp_overlap 747373 747377, overlap 747373 AGAGAAGCATAAAAA GAGCCATTCAAGC GATG GCTTAAATGGCTT AAACAGAAATGTTTA TERM 1059 747398 - 747373 - R 100 -12.7 -4.12226 | opp_overlap 747373 747377, overlap 747371 AGAAGCATAAAAAGA GCCATTCAAGC GATG GCTTAAATGGC TTAAACAGAAATGTT LVIS_0722 747958 - 747596 - | hypothetical protein TERM 1060 748174 - 748152 - R 91 -4.8 -5.626 | CATCGTACAAAAAAA GACGCTCC ACCACCG GGAACGCC TCTAACATTAATGCT mscL 748565 - 748182 - | large-conductance mechanosensitive channel LVIS_0724 748905 - 749222 + | hypothetical protein TERM 1061 749256 - 749283 + F 100 -14.2 -5.04325 | TAATGTTCAGTGGAA GCCGGTGACAAT GTTG GTTGTCGCCGGC TTTTTCTCATTTAAA LVIS_0725 749325 - 750275 + | ribosomal protein L11 methylase TERM 1062 750750 - 750773 + G 73 -9.6 -3.34962 | ACTTGGCCGCCGTAC TGGCAACGTC GGCT GACGTTACCA TTCTGGCCTATGAAG LVIS_0726 750278 - 751030 + | hypothetical protein LVIS_0727 751098 - 751433 + | hypothetical protein LVIS_0728 751462 - 753696 + | guanosine polyphosphate pyrophosphohydrolase/synthetase LVIS_0729 753716 - 754159 + | D-Tyr-tRNAtyr deacylase TERM 1063 754259 - 754222 - f 100 -13.5 -4.371 | opp_overlap 754226, overlap 754224 754226 CGTACTAGATGAAAA GACAGCGAGTCCAGGAC GTCT GTCCTGAACTCGCTTTT TAGGAGGATTTATGC TERM 1064 754257 - 754224 - f 100 -16.1 -3.78877 | opp_overlap 754226, overlap 754222 754226 TACTAGATGAAAAGA CAGCGAGTCCAGGAC GTCT GTCCTGAACTCGCTT TTTAGGAGGATTTAT TERM 1065 754226 - 754255 + F 100 -16.5 -4.58685 | opp_overlap 754226 754224 754222 CTAGATGAAAAGACA GCGAGTCCAGGAC GTCT GTCCTGAACTCGC TTTTTAGGAGGATTT TERM 1066 754255 - 754226 - f 100 -18.7 -3.46858 | opp_overlap 754226, overlap 754224 754222 CTAGATGAAAAGACA GCGAGTCCAGGAC GTCT GTCCTGAACTCGC TTTTTAGGAGGATTT TERM 1067 754568 - 754588 + G 75 -3.2 -5.06816 | ATTTTGGCGGCAACT GTTGCGGC AGGTG GGCGTAAC TTTTTGTTAACGCAT LVIS_0730 754271 - 754912 + | P-Ser-HPr phosphatase TERM 1068 754954 - 754918 - T 85 -4.3 -5.48303 | opp_overlap 754921, overlap 754919 754920 ACAAGCCTAAAAAAA GCCCCACTGAGTTGGCA TTG CGCTAACTCAGTGGTTT TTTCAATTTTGATTA TERM 1069 754953 - 754919 - T 72 -7.8 -3.87355 | opp_overlap 754921, overlap 754918 754920 CAAGCCTAAAAAAAG CCCCACTGAGTTGGCA TTG CGCTAACTCAGTGGTT TTTTCAATTTTGATT TERM 1070 754952 - 754920 - T 83 -11.3 -2.91328 | opp_overlap 754921, overlap 754919 754918 AAGCCTAAAAAAAGC CCCACTGAGTTGGCA TTG CGCTAACTCAGTGGT TTTTTCAATTTTGAT TERM 1071 754921 - 754951 + T 100 -16.3 -5.2696 | opp_overlap 754920 754919 754918 AGCCTAAAAAAAGCC CCACTGAGTTGGC ATTGC GCTAACTCAGTGG TTTTTTCAATTTTGA LVIS_0731 755812 - 754967 - | fructosamine-3-kinase LVIS_0732 756684 - 755833 - | N-acetylmuramoyl-L-alanine amidase LVIS_0733 756865 - 757395 + | hypothetical protein LVIS_0734 757467 - 757655 + | hypothetical protein TERM 1072 757640 - 757663 + F 100 -14.6 -5.79595 | TACCGTGCATACCTG CGCCCTTGTC AATT GACAGGGGCG TTTTTTATTTTCCGC hisS 757703 - 758998 + | histidyl-tRNA synthetase aspS 759012 - 760814 + | aspartyl-tRNA synthetase TERM 1073 760866 - 760841 - f 91 -11.9 -3.50853 | opp_overlap 760841 CTTTTCTAAGCACAA CGAGTCCAGAA TTTT TTCTGGGCTCG TTTTTTGTCGATTAG TERM 1074 760841 - 760866 + F 100 -14.1 -5.31456 | opp_overlap 760841 CTTTTCTAAGCACAA CGAGTCCAGAA TTTT TTCTGGGCTCG TTTTTTGTCGATTAG LVIS_0737 760949 - 761476 + | peptide methionine sulfoxide reductase TERM 1075 761633 - 761651 + G 85 -4.5 -5.45726 | overlap 761632 ACGGCATACCTATAC GGCAAAG ATTTC CGTTGCC TTTTTTTACGGTGTC TERM 1076 761846 - 761862 + G 73 -3.7 -4.85433 | opp_overlap 761846 GGCTTGGAAACAAAT TGGGAAA TCC TTTACCA TTTTTACCTTTATCT LVIS_0738 761592 - 762467 + | hypothetical protein TERM 1077 762475 - 762500 + F 91 -5.4 -5.64274 | gap 1, opp_overlap 762475 AATGGTAAGTCAAAA GTGGTTGGGCG CTAAT TGCCCG-CCAC TTTTTTTATAAATAG TERM 1078 762842 - 762817 - g 90 -14 -3.25719 | CGACCAGAGCATGAA GCGGCAGCCA CCCACT TGGCCGCCGC TGGGATTACCACACG TERM 1079 763426 - 763474 + G 74 -11 -3.06261 | gap 1, opp_overlap 763429 GCTAGGCTCCAACAA GAACTG-GGTACTCAGGTGGTGG TTGC CCAACACCTGAGTACCACTGAAC TGTTAACCGTTACGG TERM 1080 763471 - 763429 - g 100 -15.7 -3.94877 | gap 1, opp_overlap 763426 AGGCTCCAACAAGAA CTG-GGTACTCAGGTGGTGG TTGC CCAACACCTGAGTACCACTG AACTGTTAACCGTTA LVIS_0739 762709 - 763788 + | glycosyl/glycerophosphate transferase LVIS_0740 763807 - 764616 + | ABC-type polysaccharide/polyol phosphate export system, permease component TERM 1081 764689 - 764717 + G 80 -8.2 -4.42806 | overlap 764692 GCTGGTTGCTCGCTA TGGGCTCATCGT GATGA ACGATGGGCTTA TTTGTTTACCGATCA TERM 1082 764692 - 764714 + G 85 -9.9 -4.32678 | overlap 764689 GGTTGCTCGCTATGG GCTCATCGT GATGA ACGATGGGC TTATTTGTTTACCGA LVIS_0741 764636 - 765859 + | glycosyl/glycerophosphate transferase LVIS_0742 765856 - 766785 + | endonuclease IV TERM 1083 766850 - 766805 - T 100 -11.6 -4.41494 | gap 3, opp_overlap 766805 766808 GATTGTTAATTAAAA TAAGCACGACTTTC-AA--GGCA AAC TGCCAGTTTGAAAGTCGTGCTTA TTTGATACTGCCTGC TERM 1084 766805 - 766850 + T 95 -11.6 -3.79747 | gap 3, opp_overlap 766805, overlap 766808 GATTGTTAATTAAAA TAAGCACGACTTTC-AA--GGCA AAC TGCCAGTTTGAAAGTCGTGCTTA TTTGATACTGCCTGC TERM 1085 766808 - 766847 + T 80 -8.9 -4.0274 | gap 3, opp_overlap 766805, overlap 766805 TGTTAATTAAAATAA GCACGACTTTC-AA--GGCA AAC TGCCAGTTTGAAAGTCGTGC TTATTTGATACTGCC LVIS_0743 767710 - 766883 - | hypothetical protein TERM 1086 767780 - 767796 + H 72 -6.5 -4.3207 | TCAAATTTTATTTGC CTGCGTT ATT GACGCGG TTTGTGTGTTTATGT LVIS_0744 767891 - 768079 + | ribosomal protein S21 TERM 1087 768103 - 768127 + T 100 -10.7 -5.31877 | opp_overlap 768104, overlap 768104 TGCAAGTATGAAAAA ACCTCAAGGTC ATT GGCCTTGAGGC TTTTTTGTGGTGAAT TERM 1088 768126 - 768104 - T 100 -12 -5.2189 | opp_overlap 768103 768104 GCAAGTATGAAAAAA CCTCAAGGTC ATT GGCCTTGAGG CTTTTTTGTGGTGAA TERM 1089 768104 - 768126 + T 100 -14.2 -3.78042 | opp_overlap 768104, overlap 768103 GCAAGTATGAAAAAA CCTCAAGGTC ATT GGCCTTGAGG CTTTTTTGTGGTGAA LVIS_0745 769170 - 768142 - | NADPH:quinone reductase related Zn-dependent oxidoreductase LVIS_0746 769343 - 769723 + | transcriptional regulator LVIS_0747 769761 - 770207 + | GatB/YqeY domain-containing protein TERM 1090 770215 - 770238 + F 100 -11 -4.66609 | opp_overlap 770215 ATCAATAACCGAAAA CACCACGGCT AACT GGCTGTGGTG TTTTTAAATGAGATG TERM 1091 770238 - 770215 - f 79 -8.1 -4.36729 | opp_overlap 770215 ATCAATAACCGAAAA CACCACGGC TAACTG GCTGTGGTG TTTTTAAATGAGATG TERM 1092 771205 - 771219 + G 71 -5 -4.49389 | GCAAATGAAAATGTT CTTAAC GCG GTTAGG TTTTGGTTCTAAAAT LVIS_0748 770453 - 771439 + | phosphate starvation-inducible protein PhoH, ATPase LVIS_0749 771439 - 771927 + | metal-dependent hydrolase LVIS_0750 771905 - 772306 + | diacylglycerol kinase LVIS_0751 772316 - 773221 + | GTPase TERM 1093 773304 - 773321 + G 71 -2.7 -5.00616 | overlap 773306 CGTGATTATGCTGAA CGTGATT TTTT AATCAAG TTTTTTACGCAAGAG LVIS_0752 773244 - 774026 + | recombinational DNA repair protein (RecF pathway) TERM 1094 774234 - 774271 + F 100 -14.3 -5.48303 | GAAATTAAAACTTCG TCCCTACGTGAATTTGC CTCG GTGAATTCTCGTAGGGA TTTTTTTGCGCTTAT TERM 1095 775068 - 775078 + G 71 -8.2 -3.6682 | opp_overlap 775056, overlap 775065 775070 TAACCTGCTGGATGC CCGC GGG GCGG TTTCAGTGACTGAAC TERM 1096 775176 - 775164 - g 70 -7.7 -3.90112 | CGTTGCTGAACGAAA GAAGC GCG GCTTC CCACTGGTTAAGGAT glyQ 774313 - 775236 + | glycyl-tRNA synthetase subunit alpha LVIS_0754 775236 - 777311 + | glycyl-tRNA synthetase, beta subunit TERM 1097 778940 - 778969 + G 100 -15.9 -3.35073 | opp_overlap 778946, overlap 778946 GATCGAAATGTGTGG GCGAAAGTCAGCA GTGT TGCTGACTTTTGC TTCGTTCACGATGAT TERM 1098 778963 - 778946 - g 74 -9.9 -3.53343 | opp_overlap 778946 778940 AATGTGTGGGCGAAA GTCAGCA GTGT TGCTGAC TTTTGCTTCGTTCAC TERM 1099 778946 - 778963 + G 91 -9.9 -4.4959 | opp_overlap 778946, overlap 778940 AATGTGTGGGCGAAA GTCAGCA GTGT TGCTGAC TTTTGCTTCGTTCAC TERM 1100 779001 - 779013 + G 70 -7.7 -3.90744 | ATCAAGTGATTTATA CCTTG GCC CAAGG TTATTTCCAAACGCA TERM 1101 779218 - 779189 - g 88 -12.1 -3.71848 | CCCGTCGATGAACAA CTCCGCCAGAAGA AAAA TCAACTGGCGGAG GCCTCACGATTGGGT LVIS_0755 777473 - 779311 + | DNA primase TERM 1102 780218 - 780252 + G 77 -8.7 -4.21275 | opp_overlap 780228 TCCAGCTGACCATGC CGCTTACGAATTGTT AAAAG AACAATTGGAAAGCG TTTTGGATACGTTAA LVIS_0756 779328 - 780434 + | DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) TERM 1103 780462 - 780485 + F 100 -10.3 -5.09895 | opp_overlap 780462, overlap 780478 AATAGATTTGTAAAA GCAGCTACC GGTTAA GGTGGCTGC TTTTTTCAGTCACTG TERM 1104 780485 - 780462 - f 76 -8.1 -4.1413 | opp_overlap 780462 780478 AATAGATTTGTAAAA GCAGCTACC GGTTAA GGTGGCTGC TTTTTTCAGTCACTG LVIS_0757 780685 - 781191 + | transcriptional regulator TERM 1105 782587 - 782575 - g 73 -7.7 -4.00042 | CGTCTGACCAAACAA CTGCA AAA TGCAG ATGGGGTTAAGACGG LVIS_0758 781240 - 784530 + | hypothetical protein TERM 1106 784537 - 784574 + F 70 -9.3 -2.74563 | overlap 784545 CAAAAATAAGCTAAG TTAAAGAAGTCAGTGCC AATT GGTGCTGGCTTTTTTAG TGGTTCCGCTATCCA TERM 1107 784545 - 784566 + F 87 -6.5 -5.2189 | overlap 784537 AGCTAAGTTAAAGAA GTCAGTGCC AATT GGTGCTGGC TTTTTTAGTGGTTCC LVIS_0759 784649 - 785356 + | SAM-dependent methyltransferase LVIS_0760 785343 - 786149 + | hypothetical protein LVIS_0761 786210 - 787451 + | peptidase T TERM 1108 787523 - 787546 + F 78 -5.2 -4.91459 | opp_overlap 787523 TGAATCATGAAGAAG GAGGTTGCCG GTGT TGGTTACCTC TTTTTATGACTCTTA LVIS_0762 787596 - 790208 + | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones TERM 1109 790297 - 790264 - f 74 -9.6 -3.3197 | opp_overlap 790264 AGATTATCGGTACAA GCTCTTCCAGAATC TTTGAT GATTCTGGGGGAGC TTTTCAAGTGCCAAC TERM 1110 790264 - 790297 + F 100 -14 -4.13767 | opp_overlap 790264 AGATTATCGGTACAA GCTCTTCCAGAATC TTTGAT GATTCTGGGGGAGC TTTTCAAGTGCCAAC LVIS_0763 790397 - 793762 + | DNA polymerase III, alpha subunit LVIS_0764 793855 - 794583 + | putative translaldolase TERM 1111 794630 - 794595 - f 79 -8.4 -4.08846 | opp_overlap 794601, overlap 794601 ATAAAAAACTAACAA CTATAACCTGCTAATT ATTG AATCAGCAGGTTTTTG CGTAAATCTGGGAAG TERM 1112 794624 - 794601 - f 82 -10.4 -3.62762 | opp_overlap 794601, overlap 794595 AACTAACAACTATAA CCTGCTAATT ATTG AATCAGCAGG TTTTTGCGTAAATCT TERM 1113 794601 - 794624 + F 91 -8.2 -4.67755 | opp_overlap 794601 794595 AACTAACAACTATAA CCTGCTAATT ATTG AATCAGCAGG TTTTTGCGTAAATCT LVIS_0765 794836 - 796593 + | pyruvate kinase TERM 1114 796639 - 796618 - f 78 -9.3 -3.65199 | opp_overlap 796618 AACCTGTTATGGAAA CGGCCCCTC TGTC GGGGGACCG TTTTTTTGTACGCAA TERM 1115 796618 - 796639 + F 100 -9.3 -5.60993 | opp_overlap 796618 AACCTGTTATGGAAA CGGCCCCTC TGTC GGGGGACCG TTTTTTTGTACGCAA TERM 1116 796738 - 796726 - f 70 -7.7 -3.66178 | CTTTTGAACGGTAAA CCAGT CAG ACTGG TAGAATTGAGGAGAA TERM 1117 796816 - 796842 + G 91 -6.6 -5.30616 | opp_overlap 796808 796815 CGAAAATGAAACAGC GTATTTCGTGCA GGT TGCAGGAAACAC TTTTTATTTAGATAA TERM 1118 796935 - 796918 - g 73 -7.1 -4.25104 | CTTTGCTTATGAAAA TGAAGAT CATG ATCTTCA AATTACCCGGGACGC LVIS_0766 796757 - 797638 + | RNA-binding protein LVIS_0767 797650 - 798546 + | integrase LVIS_0768 798585 - 798980 + | riboflavin biosynthesis acetyltransferase RibT LVIS_0769 798949 - 799722 + | hypothetical protein LVIS_0770 799700 - 800302 + | transcriptional regulator LVIS_0771 800302 - 801024 + | 16S rRNA uridine-516 pseudouridylate synthase related enzyme TERM 1119 801243 - 801267 + F 85 -5.7 -5.14965 | overlap 801230 GCGCGTAAAACCCAA GGTCTTGCC CTTCTGT GGTGAGACC TTTTTTAGTGGGGAT LVIS_0772 801317 - 801898 + | hypothetical protein TERM 1120 801918 - 801941 + F 100 -9.6 -5.39721 | opp_overlap 801918 801917 TCCGTCACTGAAAAG TGGGTTACCG ATAG TGGTGACCCA TTTTTTGTATGGTAA LVIS_0773 801988 - 803022 + | hypothetical protein LVIS_0774 803027 - 804448 + | superfamily II DNA helicase TERM 1121 804848 - 804825 - g 81 -6 -4.88736 | CAGTAGTCACAAAAA GAAGACAGCT AAGA AGACGTCTTC GACTGCGTCTAGCAG LVIS_0775 804520 - 805134 + | LysM domain-containing protein TERM 1122 805317 - 805347 + G 76 -11.2 -3.14344 | overlap 805308 CTTGCAGGCAGGCGT TGCCTTGACTGATG AAA CGGCAGTTAAGGCA TTGCTGGACCAAATA LVIS_0776 805162 - 805842 + | cytidylate kinase rpsA 805919 - 807223 + | 30S ribosomal protein S1 TERM 1123 807239 - 807278 + F 100 -11.5 -4.34402 | TACGTTTGGTTGAAG GGGTCTGGAACGGAACT TTTGTT GGTTTCGTTGCGGACCC TTTTCGTGTCAAACG TERM 1124 807501 - 807513 + G 71 -4.8 -4.57073 | CGGTGGGATTGATAT GGGT GATGA ACCC TTTTTGACCCAAATC engA 807313 - 808620 + | GTP-binding protein EngA TERM 1125 808821 - 808808 - f 73 -5.3 -4.68593 | opp_overlap 808808 808813 808815, overlap 808813 TGGACCACTCAAAAA TGACA TAGA TGTCA TTCATCTAATCTTCT LVIS_0779 808856 - 809131 + | nucleoid DNA-binding protein TERM 1126 809162 - 809187 + F 100 -8.9 -4.72986 | opp_overlap 809162 809161 TAGCGGGTAGAAAAG GCCAGTACGGT GAAT GCCGGGCTGGC TTTTTGCTACCCGTG LVIS_0780 809237 - 810496 + | TPR repeat-containing protein TERM 1127 810507 - 810528 + T 100 -7.3 -5.7946 | opp_overlap 810506 810509 ATTAATGGGGAAAGG CACGCTTCA ATTT TGAAGGGTG TTTTTTTATTAACCA TERM 1128 810607 - 810585 - T 100 -12 -5.52909 | TAACATTCAAAAAAA GCGACCGC CAAACCC GCGGTCGC AAAAAACTAGTGCCT LVIS_0781 811552 - 810614 - | hypothetical protein LVIS_0782 811686 - 812879 + | tRNA nucleotidyltransferase/poly(A) polymerase LVIS_0783 812908 - 814800 + | ABC transporter ATPase thyA 814812 - 815762 + | thymidylate synthase LVIS_0785 815779 - 816270 + | dihydrofolate reductase TERM 1129 816399 - 816436 + T 100 -17.9 -3.5764 | opp_overlap 816399 GTCGACGACAAAAAA TGGTTCACCTTAGTCGC AATT GCAACTGAGGTGAACCA TTTGACCCTAAGATT TERM 1130 816436 - 816399 - T 100 -17.9 -5.31275 | opp_overlap 816399 GTCGACGACAAAAAA TGGTTCACCTTAGTCGC AATT GCAACTGAGGTGAACCA TTTGACCCTAAGATT LVIS_0786 817091 - 816450 - | hemolysin III-like protein TERM 1131 817439 - 817423 - g 73 -3.6 -4.86862 | TTGAAAAAATGAAAA CGGCGA AAACA TTGCCG AAGACGAGTCAGCCA LVIS_0787 817260 - 818111 + | hypothetical protein TERM 1132 818125 - 818154 + F 74 -8 -3.96148 | gap 1, opp_overlap 818130, overlap 818130 AGGAACGCATTGACC GAAAAGG-GGTGG CTGGT CCACCGCTTTTTC TTTATCCTGAGGGGG TERM 1133 818130 - 818148 + F 86 -5.9 -5.40464 | opp_overlap 818130, overlap 818125 CGCATTGACCGAAAA GGGGTGG CTGGT CCACCGC TTTTTCTTTATCCTG TERM 1134 818224 - 818191 - g 78 -5.3 -4.83759 | opp_overlap 818196 818203, overlap 818193 AATGAAATTTAAAAA CTTGAGTAAGGTG GTGGGTGT CACCTTACTCTTG GCGTTAGTGGTGCTC TERM 1135 818412 - 818400 - g 71 -4.1 -4.72272 | overlap 818401 CTGGTCGATTAAAAA CGATG ATT CATCA ACAAGATCATGTTAA LVIS_0788 818177 - 819097 + | lysophospholipase L1 related esterase LVIS_0789 819110 - 819709 + | hypothetical protein LVIS_0790 819720 - 819941 + | hypothetical protein TERM 1136 819949 - 819964 + F 100 -6.8 -5.58522 | opp_overlap 819949 TGGCTTAGTGTGAAA GTCCTC GGTT GAGGGC TTTTTATTTTGTGTG LVIS_0791 820038 - 820733 + | hypothetical protein TERM 1137 820765 - 820787 + T 100 -10.7 -5.20154 | opp_overlap 820765 AATGTCACGAAAAAA CGATTACCA CATCA TGGTAATCG TTTTTTGGCTTATCT TERM 1138 820787 - 820765 - T 100 -11.4 -5.16237 | opp_overlap 820765 AATGTCACGAAAAAA CGATTACCAC ATC ATGGTAATCG TTTTTTGGCTTATCT LVIS_0792 821056 - 820961 - | hypothetical protein TERM 1139 821120 - 821106 - H 74 -5 -4.79657 | ATAATACTAATAAAA TCTCTG GCC CAAAGA TAAACGCCACCACAA LVIS_0793 821775 - 822188 + | hypothetical protein LVIS_0794 822185 - 822379 + | hypothetical protein LVIS_0795 822655 - 823515 + | GTPase LVIS_0796 823508 - 824281 + | ribonuclease HII LVIS_0797 824321 - 825211 + | Rossmann fold nucleotide-binding protein for DNA uptake TERM 1140 825398 - 825383 - g 73 -4.6 -4.69549 | overlap 825384 AAGCTAAAACCAAAA CGCGGC GCAA ACCGCA AAAAAAGTTAGTGAT TERM 1141 826826 - 826850 + G 79 -11.5 -3.18383 | opp_overlap 826846 CATCGACCTATGCCC CGACATTGGAT ACC ATCCAACGTCG TTACTACGTCAAACT LVIS_0798 825346 - 827457 + | DNA topoisomerase I TERM 1142 827516 - 827466 - f 72 -7.1 -4.05229 | gap 2, opp_overlap 827471 827508, overlap 827471 AAAGTAAAGATTAAA CAAAACACGGCAACC-T-ACCAGAC TAT ATCTGGTCAAGGTCGTCGTGTTTTT ACGTTGTTGATTGCT TERM 1143 827471 - 827511 + F 80 -6.3 -4.8143 | gap 2, opp_overlap 827466 827471, overlap 827508 AAAGATTAAACAAAA CACGGCAACC-T-ACCAGA CTATA TCTGGTCAAGGTCGTCGTG TTTTTACGTTGTTGA TERM 1144 827511 - 827471 - f 86 -7 -5.00923 | gap 2, opp_overlap 827471 827508, overlap 827466 AAAGATTAAACAAAA CACGGCAACC-T-ACCAGAC TAT ATCTGGTCAAGGTCGTCGTG TTTTTACGTTGTTGA LVIS_0799 827622 - 828557 + | integrase LVIS_0800 828561 - 829103 + | ATP-dependent protease peptidase subunit TERM 1145 829724 - 829714 - g 71 -6.8 -4.15833 | AGGACTACTCGAAAA CCAC ATG GTGG AAATCGAGATGGATG hslU 829103 - 830533 + | ATP-dependent protease ATP-binding subunit TERM 1146 830542 - 830567 + F 100 -16.3 -4.55287 | opp_overlap 830545 830549 TCTGTAATTTTTTAA GGACCAAGACA AACG TGTCTTGGTCC TTTTGTGTAGATGGC TERM 1147 830564 - 830545 - f 76 -10.8 -2.72379 | opp_overlap 830542, overlap 830549 GTAATTTTTTAAGGA CCAAGACA AACG TGTCTTGG TCCTTTTGTGTAGAT LVIS_0802 830631 - 831503 + | galactose mutarotase-like protein TERM 1148 831511 - 831547 + T 100 -12.4 -4.7153 | opp_overlap 831511 ATTTTTAAACAAAAA GGACCCATCCGACT CAGTAAACC AGTCGAATGGGTCC TTTTTCAGGTTATTT TERM 1149 831547 - 831511 - T 100 -14.6 -5.27938 | gap 1, opp_overlap 831511 ATTTTTAAACAAAAA GGACCCATCCGACTCAG TAAA CC-AGTCGAATGGGTCC TTTTTCAGGTTATTT LVIS_0803 832180 - 831557 - | hypothetical protein LVIS_0804 832441 - 834408 + | DNA topoisomerase IV subunit B LVIS_0805 834431 - 836878 + | DNA topoisomerase IV subunit A LVIS_0806 837013 - 837978 + | transcriptional regulator LVIS_0807 838007 - 838936 + | putative manganese-dependent inorganic pyrophosphatase TERM 1150 838964 - 838998 + F 100 -22.4 -5.04868 | opp_overlap 838955 838952 838964 TAACAATTCTTATAA GCGCTCCAAACCAATT TTT GATTGGTTTGGAGCGC TTTTGTTTGCTTTAA TERM 1151 838998 - 838964 - f 100 -21.7 -3.34947 | opp_overlap 838964, overlap 838955 838952 TAACAATTCTTATAA GCGCTCCAAACCAAT TTTTG ATTGGTTTGGAGCGC TTTTGTTTGCTTTAA LVIS_0808 839084 - 839659 + | Zn-dependent protease TERM 1152 839674 - 839694 + F 100 -10.5 -4.79756 | AAATTAGATTCATTA GTCGGGATT AAA AATCTCGAC TTTTTAGATTGTATA LVIS_0809 839813 - 840256 + | peptide methionine sulfoxide reductase domain-containing protein LVIS_0810 840284 - 840817 + | peptide methionine sulfoxide reductase LVIS_0811 840834 - 841274 + | ADP-ribose pyrophosphatase TERM 1153 841331 - 841280 - f 100 -9.8 -4.62772 | gap 1, opp_overlap 841285, overlap 841285 GCTAAACTAAATAAA TGAAACCGCCATATGA-TTTACA GTAATTG TGTAAAGTCATATGGCGGTTTTT TAAGGAGTTATCGGG TERM 1154 841326 - 841285 - f 100 -14.1 -4.28115 | gap 1, opp_overlap 841285, overlap 841280 ACTAAATAAATGAAA CCGCCATATGA-TTTACA GTAATTG TGTAAAGTCATATGGCGG TTTTTTAAGGAGTTA TERM 1155 841285 - 841326 + F 100 -14.1 -5.03145 | gap 1, opp_overlap 841285 841280 ACTAAATAAATGAAA CCGCCATATGA-TTTACA GTAATTG TGTAAAGTCATATGGCGG TTTTTTAAGGAGTTA xerS 842126 - 843190 + | site-specific tyrosine recombinase XerS TERM 1156 843530 - 843515 - g 91 -3.4 -5.85425 | CAAACAAAGAAAAAA TATTTT ATCT AAAATA TACGGTTATTTCGGC LVIS_0813 843217 - 844602 + | hypothetical protein TERM 1157 844765 - 844715 - T 100 -8.1 -5.7946 | gap 2, opp_overlap 844715 TCTGTAACAAAAAAA CAGTTTCAATTTCAGTTATGGTTAA GAA TTAAT--TAACCGAAATTGAAACTG TTTTATGTTATCGCA TERM 1158 844715 - 844765 + T 86 -8.1 -4.73682 | gap 2, opp_overlap 844715 TCTGTAACAAAAAAA CAGTTTCAATTTCAGTTATGGTTAA GAA TTAAT--TAACCGAAATTGAAACTG TTTTATGTTATCGCA LVIS_0814 845519 - 844809 - | SAM-dependent methyltransferase TERM 1159 845214 - 845242 + g 75 -8 -4.18018 | overlap 845215 ATCAATACCCGTGAT ATGTCCTCCGGC AGGTA GCCGGTGGGCAA TTTTGAATAGGACCA TERM 1160 845215 - 845241 + g 79 -11.5 -3.10597 | overlap 845214 TCAATACCCGTGATA TGTCCTCCGGC AGGTA GCCGGTGGGCA ATTTTGAATAGGACC LVIS_0815 846409 - 845627 - | diadenosine tetraphosphatase-like protein TERM 1161 846113 - 846093 - G 91 -13.3 -3.61268 | opp_overlap 846091 846106 GAGTGAATCCCCAAA CGACGCCAA CTC TTGGCGCCG CCATTTAAGCGCCAA TERM 1162 846538 - 846490 - R 100 -20.8 -3.29987 | gap 1, opp_overlap 846496 846501, overlap 846482 846493 846496 846501 CAGATTATCATAATA TGA-CAACAAAATGCCCATAGAC TTTT GTCTATGAGCATTTTGTTGATCA GTCATTAGTAACAAT TERM 1163 846534 - 846493 - R 100 -22.7 -2.8214 | opp_overlap 846496 846501, overlap 846490 846496 846501 ATTATCATAATATGA CAACAAAATGCCCATAGAC TTTT GTCTATGAGCATTTTGTTG ATCAGTCATTAGTAA TERM 1164 846496 - 846531 + r 100 -16.4 -3.20435 | opp_overlap 846493 846490 846496 846501, overlap 846501 ATCATAATATGACAA CAAAATGCCCATAGAC TTTT GTCTATGAGCATTTTG TTGATCAGTCATTAG TERM 1165 846531 - 846496 - R 100 -18.6 -3.55173 | opp_overlap 846496 846501, overlap 846493 846490 846501 ATCATAATATGACAA CAAAATGCCCATAGAC TTTT GTCTATGAGCATTTTG TTGATCAGTCATTAG TERM 1166 846526 - 846501 - R 100 -12.7 -4.83722 | opp_overlap 846496 846501, overlap 846496 846493 846490 AATATGACAACAAAA TGCCCATAGAC TTTT GTCTATGAGCA TTTTGTTGATCAGTC TERM 1167 846501 - 846526 + r 100 -10.5 -4.72497 | opp_overlap 846501 846496 846493 846490, overlap 846496 AATATGACAACAAAA TGCCCATAGAC TTTT GTCTATGAGCA TTTTGTTGATCAGTC LVIS_0816 847480 - 846536 - | NADPH:quinone reductase related Zn-dependent oxidoreductase LVIS_0817 847573 - 848376 + | transcriptional regulator LVIS_0818 849045 - 848395 - | EndoIII-related endonuclease LVIS_0819 849253 - 849759 + | glycopeptide antibiotics resistance protein TERM 1168 849764 - 849796 + F 80 -2.5 -5.53991 | TTACAAATTAGAAGC GAGACGTACGCAG ACACTTA CAGCGCGCGCCTC TTTTTTTCGTCAATA LVIS_0820 849990 - 850499 + | glycopeptide antibiotics resistance protein TERM 1169 850516 - 850546 + F 100 -11.3 -5.45802 | opp_overlap 850506, overlap 850506 TCATATCGACCTCAG GCGATTGTTCC CAAACCAGC GGAACAATCGC TTTTTATTTTGCCAG LVIS_0821 850616 - 850780 + | hypothetical protein TERM 1170 850839 - 850817 - T 100 -10.6 -4.90266 | opp_overlap 850819, overlap 850819 CGTACCAACTAAAAA GAGCTGGACA TAT TGTCCAGCTT TTAGTCGTCAACCGA TERM 1171 850837 - 850819 - T 100 -13.2 -4.07008 | opp_overlap 850819, overlap 850817 TACCAACTAAAAAGA GCTGGACA TAT TGTCCAGC TTTTAGTCGTCAACC TERM 1172 850819 - 850837 + T 100 -13.2 -4.30576 | opp_overlap 850819 850817 TACCAACTAAAAAGA GCTGGACA TAT TGTCCAGC TTTTAGTCGTCAACC LVIS_0822 851277 - 850840 - | GtcA family membrane protein TERM 1173 851538 - 851511 - R 100 -12.8 -4.67755 | ATACCCATTTAAAAA CACCGTTCCGGT AAAA ACCAAAACGGTG TCACTAAGTTATTTA LVIS_0823 852080 - 851547 - | hypothetical protein TERM 1174 851624 - 851606 - G 73 -7.4 -4.22927 | TTAGCAACAGATAAA CCAGCACA ATC TGTACCGG TGTGACGATCAGTTC TERM 1175 852043 - 852061 + g 80 -6.7 -4.69622 | overlap 852044 ACCATACTCAACGTG TCCAGCT TGGGT AGCTGGG TTTTTGCCATTGTCT LVIS_0824 853128 - 852262 - | hypothetical protein LVIS_0825 854436 - 853189 - | major facilitator superfamily permease LVIS_0826 855436 - 854423 - | hypothetical protein LVIS_0827 856175 - 855747 - | transcriptional regulator LVIS_0828 856376 - 858082 + | fibronectin-binding protein TERM 1176 858159 - 858102 - T 100 -23.9 -4.58644 | opp_overlap 858116, overlap 858103 858116 AACTAACAACTAAAA TTAACTAGCAAAAAGACGACCTATCAG ATAA CTGACAGGTCGTCTTTTTGCTAACTAC AACTAAATAGTTCGA TERM 1177 858158 - 858103 - T 100 -27.4 -3.33559 | opp_overlap 858116, overlap 858102 858116 ACTAACAACTAAAAT TAACTAGCAAAAAGACGACCTATCAG ATAA CTGACAGGTCGTCTTTTTGCTAACTA CAACTAAATAGTTCG TERM 1178 858145 - 858116 - T 100 -17.3 -4.81685 | opp_overlap 858116, overlap 858103 858102 ATTAACTAGCAAAAA GACGACCTATCAG ATAA CTGACAGGTCGTC TTTTTGCTAACTACA TERM 1179 858116 - 858145 + T 100 -15.1 -4.7497 | opp_overlap 858116 858103 858102 ATTAACTAGCAAAAA GACGACCTATCAG ATAA CTGACAGGTCGTC TTTTTGCTAACTACA LVIS_0829 860738 - 858162 - | carbamoylphosphate synthase large subunit LVIS_0830 861817 - 860741 - | carbamoyl phosphate synthase small subunit LVIS_0831 862375 - 861842 - | pyrimidine operon attenuation protein/uracil phosphoribosyltransferase TERM 1180 862420 - 862465 + r 76 -11.1 -2.70932 | opp_overlap 862422 GAGCATCTGTGCAGA AACGGGCGCGTTTCTTCGGCA ACAT TGGTGAAGAAACCCGCCCGCC TGATTACCCGGCAAA TERM 1181 862463 - 862422 - R 100 -15.9 -3.86346 | opp_overlap 862420 GCATCTGTGCAGAAA CGGGCGCGTTTCTTCGGCA ACAT TGGTGAAGAAACCCGCCCG CCTGATTACCCGGCA LVIS_0832 863441 - 862518 - | pseudouridylate synthase, 23S RNA-specific TERM 1182 863278 - 863288 + g 71 -6.8 -4.15328 | ACCCGAATCGTTGCC CCCA CCT TGGG TTTGTCCTTTGGCTT LVIS_0833 863905 - 863441 - | lipoprotein signal peptidase TERM 1183 864044 - 864009 - R 87 -6.3 -5.15117 | gap 1, opp_overlap 864009 GAAAAGGCCAAAAAA CAGTCATCGC-TGTGA ATTCG TCACACACGACAACTG TTTTAATTTAACTAA LVIS_0834 865720 - 864065 - | formate--tetrahydrofolate ligase LVIS_0835 866061 - 865717 - | pore-forming protein TERM 1184 866060 - 866040 - G 74 -6.8 -4.42386 | CTTCTAGCCAGAAAA TGGCGCCC ATGAA GAGCACCA TGAAGGTCCAGCTCC LVIS_0836 866165 - 866569 + | ribonuclease HI LVIS_0837 867669 - 866545 - | glycine/D-amino acid oxidase TERM 1185 866983 - 867003 + g 78 -5.4 -4.91109 | AGGATAATCCTTAAC GGCCAATT CAATT AACTGGCC TTTTTGTGGTCGCAC TERM 1186 867764 - 867812 + r 75 -5.2 -4.87893 | gap 1, opp_overlap 867770, overlap 867765 867770 GGACATTGTCCCAAA CAAAAAGGACCCCGTA-CCCGCC AATC GGCGTGATTCGGAGTCCTTTTGC TTTTTGCTTAAAGTT TERM 1187 867765 - 867811 + r 73 -8.7 -3.51651 | gap 1, opp_overlap 867770, overlap 867764 867770 GACATTGTCCCAAAC AAAAAGGACCCCGTA-CCCGCC AATC GGCGTGATTCGGAGTCCTTTTG CTTTTTGCTTAAAGT TERM 1188 867806 - 867770 - R 100 -13 -5.27335 | gap 1, opp_overlap 867765 867764 867770 TGTCCCAAACAAAAA GGACCCCGTACC-CGCC AATC GGCGTGATTCGGAGTCC TTTTGCTTTTTGCTT TERM 1189 867770 - 867806 + r 100 -8.6 -4.81523 | gap 1, opp_overlap 867770, overlap 867765 867764 TGTCCCAAACAAAAA GGACCCCGTA-CCCGCC AATC GGCGTGATTCGGAGTCC TTTTGCTTTTTGCTT LVIS_0838 868428 - 867826 - | oxidoreductase LVIS_0839 869085 - 868561 - | transcriptional regulator LVIS_0840 869272 - 869943 + | immunity protein PlnI TERM 1190 869984 - 869955 - T 100 -11.5 -5.12707 | opp_overlap 869955 TTAAACTCTAAAAAA TGCGTTCAGGACC GTTA AGTCCCAAACGCA TTTTTTAATATCGCT TERM 1191 869955 - 869984 + T 87 -6.4 -5.22312 | opp_overlap 869955 TTAAACTCTAAAAAA TGCGTTCAGGAC CGTTAA GTCCCAAACGCA TTTTTTAATATCGCT LVIS_0841 870348 - 870001 - | hypothetical protein LVIS_0842 870916 - 870455 - | NUDIX family hydrolase TERM 1192 871186 - 871169 - R 100 -8.4 -5.19261 | opp_overlap 871169 AAATGTACGAAAAAA GGAGGC TCACTG GCCTCC TTTATTTTAGTCTGT TERM 1193 871169 - 871186 + r 100 -9.1 -4.76191 | opp_overlap 871169 AAATGTACGAAAAAA GGAGGCT CACT GGCCTCC TTTATTTTAGTCTGT LVIS_0843 871393 - 871193 - | hypothetical protein LVIS_0844 872856 - 871510 - | ammonia permease TERM 1194 872737 - 872752 + g 81 -3.2 -5.40474 | opp_overlap 872737, overlap 872739 GATAAAAACGGACAA CATCGT ATTC ACGACG TTTTTTTCAGAAACT TERM 1195 872878 - 872900 + r 73 -5.6 -4.57073 | CGCCCTCTCTGCCCT TGATGTTAGG AAT TCTAACACCA TTTTTGAAGAAAGTC TERM 1196 873003 - 872969 - R 100 -21 -5.38249 | opp_overlap 872969 872978 AGCAACCACAAAAAA GGGACAAAATAGCGAT ATA ATCGCCATTTTGTCCC TTTTAAATCGAATGT TERM 1197 872969 - 873003 + r 100 -18.8 -4.19258 | opp_overlap 872969, overlap 872978 AGCAACCACAAAAAA GGGACAAAATAGCGAT ATA ATCGCCATTTTGTCCC TTTTAAATCGAATGT TERM 1198 872978 - 872994 + r 70 -5.1 -4.54477 | opp_overlap 872969, overlap 872969 AAAAAAGGGACAAAA TAGCGAT ATA ATCGCCA TTTTGTCCCTTTTAA LVIS_0845 873405 - 873025 - | diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases LVIS_0846 874553 - 873411 - | N6-adenine-specific DNA methylase TERM 1199 874634 - 874615 - R 100 -13.6 -5.61596 | ATCGCTATAAAAAAA GGTGGGAG CAAG CTCCCACC CACCTGACATGGTGT TERM 1200 874823 - 874842 + r 93 -13.6 -2.82015 | TTTACCGCGTTCCAC CGCCTAGG TTTC CCTAGGCG TATCGTCACTGTGGC LVIS_0848 875404 - 875051 - | cell division initiation protein LVIS_0849 876029 - 875460 - | hypothetical protein recU 876233 - 876838 + | Holliday junction-specific endonuclease TERM 1201 877116 - 877132 + G 70 -7.9 -3.91716 | opp_overlap 877114 877112 877116 TTCTACAAGAATATA CGATGCC AAT GGCAACG TTATTTCACGAATGG TERM 1202 877261 - 877242 - g 80 -6.4 -4.82901 | overlap 877245 CCGTTTCTATAAAAA TAATGGGG TTGA CCCCATTC GGATTGTCGGGGCTG TERM 1203 877258 - 877245 - g 81 -8.1 -4.52873 | overlap 877242 TTTCTATAAAAATAA TGGGG TTGA CCCCA TTCGGATTGTCGGGG LVIS_0851 876883 - 879189 + | membrane carboxypeptidase (penicillin-binding protein) TERM 1204 879217 - 879252 + T 100 -17.2 -5.15634 | opp_overlap 879217 AGGTAACTATTAAAA GAATCGTTATTCTCAG TTGA TTGAGAATAACGATTC TTTTTTAATACGCTC TERM 1205 879252 - 879217 - T 100 -16.5 -4.35742 | opp_overlap 879217 AGGTAACTATTAAAA GAATCGTTATTCTCA GTTGAT TGAGAATAACGATTC TTTTTTAATACGCTC TERM 1206 879378 - 879354 - T 81 -4.2 -5.31456 | TCAACCTATAAAAAA GCAGTCAGAT TCAAC AGCCGACCGC TTAATAAGTTAAATT LVIS_0852 879757 - 879395 - | rhodanese-related sulfurtransferase LVIS_0853 880282 - 879761 - | transcriptional regulator TERM 1207 880404 - 880384 - R 100 -9.7 -5.64873 | TCTAACAACAAAAAA GCCTGAAGC CAA GCTCCAGAC TGATAGGTTGTACTA LVIS_0854 881134 - 880439 - | putative primosome component related protein TERM 1208 881191 - 881162 - R 82 -8.6 -4.30014 | gap 1, opp_overlap 881162 TTTACCAATTGAAAA CGGCCGTACTCGC CAACT GCGAAT-CGACCG TTTCGTCAAATACCG TERM 1209 881222 - 881204 - R 89 -11.8 -3.34398 | opp_overlap 881203 881202, overlap 881202 CCGTTTCGTCAAATA CCGTAATG AAC CATTACGG GGTTGTCATAAATTT LVIS_0855 882398 - 881217 - | aspartate/tyrosine/aromatic aminotransferase LVIS_0856 882922 - 882419 - | hypothetical protein TERM 1210 882997 - 883014 + r 84 -5.5 -5.40072 | gap 1, overlap 883000 AGACTTCTGGGGGGT GTC-GCCG AAT CGGCTGGC TTTTTTTCAAAAAAA LVIS_0857 885821 - 882975 - | Rad3-related DNA helicase TERM 1211 884396 - 884413 + g 71 -6.3 -4.22009 | gap 1, overlap 884376 884375 884398 ACTTAACTTGAGTTC GC-CGTTG TTT CAACGTGC TTTCTGTTAAATGCT LVIS_0858 886086 - 887033 + | mevalonate kinase TERM 1212 887235 - 887219 - g 78 -12.3 -2.73721 | opp_overlap 887212 887205 ATCAATGCCCAATTA CTGGCAG CTC CTGCCAG CCAAAAGGTCGTTGA LVIS_0859 887030 - 888004 + | phosphomevalonate kinase LVIS_0860 888059 - 889132 + | mevalonate kinase TERM 1213 889383 - 889365 - g 76 -11 -3.16564 | opp_overlap 889356 GCGGTAGCCCACGAA CGGGCGTT GTT AACGCCCA ATTGGGACGAATTGC LVIS_0861 889145 - 890182 + | isopentenyl pyrophosphate isomerase TERM 1214 890185 - 890222 + T 84 -10.7 -3.66117 | opp_overlap 890190, overlap 890190 ATTAACTTATTAAAC AAAAAGCGTGTTCCC CAAAACCT GGGAGCACGCTTTTA TTGATTTCATTTAAT TERM 1215 890190 - 890217 + T 100 -10.6 -4.85545 | opp_overlap 890190, overlap 890185 CTTATTAAACAAAAA GCGTGTTCCC CAAAACCT GGGAGCACGC TTTTATTGATTTCAT TERM 1216 890217 - 890190 - T 100 -8.4 -5.33405 | opp_overlap 890190 890185 CTTATTAAACAAAAA GCGTGTTCCC CAAAACCT GGGAGCACGC TTTTATTGATTTCAT LVIS_0862 891591 - 890233 - | tRNA and rRNA cytosine-C5-methylase TERM 1217 891118 - 891104 - G 73 -7.1 -4.25658 | opp_overlap 891103, overlap 891101 891114 ACCTTATCAAAATAA TCCGG GAATA CCGGA CTCAGTTGTTCCGGC TERM 1218 891909 - 891894 - g 73 -8.2 -3.90744 | opp_overlap 891893 GCTGTTTTGAAAGAA GCCCGG GCGG CCGGAC ATATCGTCAGTATCG LVIS_0863 891801 - 892613 + | HAD superfamily hydrolase TERM 1219 892616 - 892658 + T 100 -11.3 -4.10657 | opp_overlap 892616 ATTAGCCGAATAAAA GGACGTCGACAGTTTCCCA CTATC TGGAAAACAGTCAGCGTCC TTTTAAGCCATCTAG TERM 1220 892658 - 892616 - T 100 -13.5 -4.66318 | opp_overlap 892616 ATTAGCCGAATAAAA GGACGTCGACAGTTTCCCA CTATC TGGAAAACAGTCAGCGTCC TTTTAAGCCATCTAG LVIS_0864 893830 - 892670 - | succinyl-diaminopimelate desuccinylase LVIS_0865 893929 - 894393 + | hypothetical protein TERM 1221 894409 - 894388 - T 100 -8.8 -5.1675 | opp_overlap 894388 CCAGGTATCAAAAAA CCATGATC TCAAAC GATCATGG TTTTTGCACTAGTCA TERM 1222 894388 - 894409 + T 100 -8.8 -4.63527 | opp_overlap 894388 CCAGGTATCAAAAAA CCATGATC TCAAAC GATCATGG TTTTTGCACTAGTCA LVIS_0866 895281 - 894418 - | aldo/keto reductase LVIS_0867 896159 - 895284 - | aldo/keto reductase LVIS_0869 897298 - 898338 + | threonine dehydrogenase related Zn-dependent dehydrogenase TERM 1223 898362 - 898390 + T 100 -10.4 -4.87626 | opp_overlap 898362 TCATTCAGTTAAAAA CACCAACTAAGT CTATT ACCTAGTTGGTG TTTTTCGTGTTCAGA TERM 1224 898390 - 898362 - T 100 -12.6 -4.67353 | opp_overlap 898362 TCATTCAGTTAAAAA CACCAACTAAGT CTATT ACCTAGTTGGTG TTTTTCGTGTTCAGA LVIS_0870 898730 - 898428 - | hypothetical protein LVIS_0871 899161 - 898733 - | transcriptional regulator TERM 1225 898876 - 898894 + g 74 -3.8 -4.89339 | CCACCTGCTCACCGG CAGTCGTA ACG TGCAACTG TTTTTCTCGATCATT LVIS_0872 899683 - 899237 - | transcriptional regulator TERM 1226 899704 - 899723 + r 74 -7.9 -4.04318 | TGACCTCCTAGCTTG CCCTAGA GTGTGG TCTAGGG TTTATGCTGTCTACA TERM 1227 900128 - 900146 + r 80 -10.2 -3.42996 | CTCAAGGCCGCCGCG GCCGCTGG CGT CAAGCGGC TTGTCATGACTGCTA TERM 1228 900501 - 900515 + r 73 -7.1 -4.16842 | AATGACCACCCCAGC CGCTG CCAAT CAGCG TTTCTTGGCAGTAGA TERM 1229 900827 - 900856 + r 100 -10.9 -5.38549 | gap 1, opp_overlap 900827 GTTGGAAATTAAAAA TCAGTCCTTTC-CA AAA TGTGGAAGGACTGA TTTTTGTTATTTAAC TERM 1230 900856 - 900827 - R 100 -10.2 -4.98531 | gap 1, opp_overlap 900827 GTTGGAAATTAAAAA TCAGTCCTTTCCA AAATG TGGAA-GGACTGA TTTTTGTTATTTAAC LVIS_0874 901855 - 900887 - | NADPH:quinone reductase related Zn-dependent oxidoreductase LVIS_0875 903993 - 901966 - | K+ transporter TERM 1231 905162 - 905139 - R 91 -7.4 -5.3236 | ATAACTGATAAAAAA GCCAACGCCA TGAA TCACGTTGGC CAATCGATTATTAAC TERM 1232 905760 - 905748 - R 73 -9.1 -3.53012 | opp_overlap 905742 TGCTGCTCTGCCAAA TCCGC CTG GCGGA ATAAGGCTCGTTGTT TERM 1233 906471 - 906461 - R 74 -4.6 -4.87807 | GTAATACAGTAAAAA CGGC ATT GCCA CTTCGATGGTAACCA TERM 1234 907214 - 907163 - R 100 -16.8 -3.95584 | gap 1, opp_overlap 907168, overlap 907168 CCTCCATTAATCAAA GAAAAGCAAGGCCCGTTAGTCTTCG CCA CGGAGAC-AACGGTCCTTGCTTTTA GATTACACGTTATGC TERM 1235 907168 - 907209 + r 100 -18.9 -4.27584 | gap 1, opp_overlap 907163 907168 ATTAATCAAAGAAAA GCAAGGCCCGTTAGTCTTCG CCA CGGAGAC-AACGGTCCTTGC TTTTAGATTACACGT TERM 1236 907209 - 907168 - R 100 -16.7 -5.00851 | gap 1, opp_overlap 907168, overlap 907163 ATTAATCAAAGAAAA GCAAGGCCCGTTAGTCTTCG CCA CGGAGAC-AACGGTCCTTGC TTTTAGATTACACGT LVIS_0878 907570 - 907217 - | hypothetical protein TERM 1237 908872 - 908853 - R 100 -10 -4.8048 | opp_overlap 908853, overlap 908809 CGTGCACAGCAAAAA GGCCACAA TTAC TCGTGGCC TTTGACTTATTTATG TERM 1238 908853 - 908872 + r 74 -7.8 -3.91042 | opp_overlap 908809 908853 CGTGCACAGCAAAAA GGCCACAA TTAC TCGTGGCC TTTGACTTATTTATG LVIS_0880 909517 - 908879 - | transcriptional regulator LVIS_0881 910743 - 909565 - | ABC-type multidrug transport system, permease component TERM 1239 910056 - 910074 + g 71 -6.6 -4.17048 | TTGCCAGCAGTCGAT CGAGCGTC CCC GTCGTTCG TTCTTTTAACAGCGC TERM 1240 910372 - 910384 + g 71 -4.8 -4.65895 | TTGTGAAATACTGGT TGCC GTTAA GGCA TTTTTGAATGCCAGC LVIS_0882 911465 - 910740 - | ABC-type multidrug transport system, ATPase component TERM 1241 911502 - 911487 - R 72 -7.6 -3.90291 | opp_overlap 911473 911470 911482, overlap 911471 ACTCCCTTAATTAAA GTGAGT GATT ACTCAC CTAAATGATCTAAAT TERM 1242 911555 - 911520 - R 86 -10.1 -3.99347 | gap 1, overlap 911553 AAATGATCTAAATAA TAGCTATTTTTAGCCT CAAGT AGG-TAAAAATAGCTA GGTGAGTGATTACTC TERM 1243 911556 - 911573 + r 84 -9.9 -3.87346 | opp_overlap 911553, overlap 911569 911570 AGGTAAAAATAGCTA GGTGAGT GATT ACTCACC TTTGGTGCTTCTAAT TERM 1244 911680 - 911632 - R 100 -20 -5.63504 | gap 1, opp_overlap 911632, overlap 911620 AAGTCCACAAAAAAA TACTGCGGATTC-AGATTTGATC TAAT GATCTAATCTTGAATCCGCAGTA TTTTACGCTAGCTAG TERM 1245 911632 - 911680 + r 100 -20 -4.14739 | gap 1, opp_overlap 911620 911632 AAGTCCACAAAAAAA TACTGCGGATTC-AGATTTGATC TAAT GATCTAATCTTGAATCCGCAGTA TTTTACGCTAGCTAG TERM 1246 911946 - 911964 + r 72 -7.5 -4.0174 | CTGGTTGGTCTTTCA CAGGTTA CTTTC TAACCTG TTTGTCGGTTGTGTT LVIS_0883 912214 - 911957 - | hypothetical protein TERM 1247 912249 - 912290 + r 74 -10.2 -2.70774 | opp_overlap 912252, overlap 912248 TAAATATTTACGCAA AAAGGGTGTCGAGAAATC CCCCTT GATTTCTCGACACCCCCA ATTATAATTAACCTC TERM 1248 912287 - 912252 - R 100 -20.7 -4.67755 | opp_overlap 912249 912248 ATATTTACGCAAAAA GGGTGTCGAGAAATC CCCCTT GATTTCTCGACACCC CCAATTATAATTAAC LVIS_0884 912984 - 912304 - | N-acetylmuramoyl-L-alanine amidase LVIS_0885 913336 - 913076 - | hypothetical protein LVIS_0886 913696 - 913445 - | hypothetical protein LVIS_0887 914305 - 913907 - | protein-tyrosine-phosphatase LVIS_0888 914886 - 914302 - | transcriptional regulator TERM 1249 915535 - 915518 - g 78 -7.7 -4.37092 | ATCTGGTGGACAAAA GCAACGG GTCG CCATTGC GCGGGCCTTGGCAAG TERM 1250 916629 - 916604 - g 77 -4.7 -4.86939 | TAATAAACTCAAAAA TGACGGCAC CAAATTAT ATGCCGCCA CATCAATTACTAGTT LVIS_0889 915072 - 917075 + | peptide ABC transporter ATPase TERM 1251 917101 - 917128 + T 100 -12.8 -5.0916 | opp_overlap 917101 ATAAAACCCAAAAAA GGAGTCTGAGAC AAAA GTCTCAAACTCC TTTTTGTGTTGCCAA TERM 1252 917128 - 917101 - T 100 -15 -5.28315 | opp_overlap 917101 ATAAAACCCAAAAAA GGAGTCTGAGAC AAAA GTCTCAAACTCC TTTTTGTGTTGCCAA LVIS_0891 919696 - 918572 - | glycosyltransferase LVIS_0892 920295 - 919696 - | hypothetical protein TERM 1253 920137 - 920114 - G 72 -6 -4.42464 | gap 1, overlap 920115 920116 920118 AAGGTGCCAAATAAA GCCACACCGTG AAT CACGGCAT-GC GTAAAAAACCATACC TERM 1254 920160 - 920146 - G 80 -5 -5.03314 | GGCATGCGTAAAAAA CCATAC CCA ATATGG CCGGCTAATCGCGGT LVIS_0893 921633 - 920413 - | hypothetical protein TERM 1255 921934 - 921908 - R 75 -7.3 -4.27316 | gap 1, opp_overlap 921908 CTCGGCAACGCAAAA GAGGTC-GAGAC TTTT GTCCCCGACCCC TCAATTACTCTTCAA LVIS_0894 922142 - 921939 - | transcriptional regulator LVIS_0895 922497 - 922162 - | hypothetical protein TERM 1256 922324 - 922306 - G 80 -7.4 -4.62471 | GTTAATGCGGAAAAA CCAACTAC TAG GCAGCTGG TTCCCACTAGCCATA LVIS_0896 923720 - 922791 - | IS30 family transposase TERM 1257 922920 - 922897 - G 77 -10.4 -3.53343 | AACGTCGTCGTTAAA TCTTGAGCAC TAAT GTGCTCAAAA CGAGTCCCTTTAGGA TERM 1258 923723 - 923777 + r 100 -8.9 -5.24129 | gap 2, opp_overlap 923723 TTATACTAGACAAAA GATCAGC-TCCTAAAAGATGG-GTTTG TGG TAAACACCATTTTAAAGGAAGCTGATC TTTTTTGTCCGAACA TERM 1259 923777 - 923723 - R 75 -6 -4.5954 | gap 2, opp_overlap 923723 TTATACTAGACAAAA GATCAGC-TCCTAAAAGATGG-GTTT GTGGT AAACACCATTTTAAAGGAAGCTGATC TTTTTTGTCCGAACA TERM 1260 923781 - 923805 + r 76 -7.9 -4.1721 | overlap 923785 AGGAAGCTGATCTTT TTTGTCCGAAC AGC GTTCGGATTAA TTTTACAATCTACCT TERM 1261 923785 - 923801 + r 84 -10.9 -3.68767 | overlap 923781 AGCTGATCTTTTTTG TCCGAAC AGC GTTCGGA TTAATTTTACAATCT TERM 1262 923875 - 923890 + r 78 -6 -4.85129 | opp_overlap 923875, overlap 923877 GAGGGCACAAAAAAA GCCGGC CAAC GCCGAC TTTTTGCTATCTGCT TERM 1263 923890 - 923875 - R 100 -8.2 -5.626 | opp_overlap 923875 923877 GAGGGCACAAAAAAA GCCGGC CAAC GCCGAC TTTTTGCTATCTGCT LVIS_0897 925411 - 923909 - | glycerol kinase TERM 1264 925517 - 925569 + r 88 -10.1 -4.11773 | opp_overlap 925526, overlap 925526 CGCCAATTACTTTTC CAAATGAAACCGCCACCAA-GCTGA ATTTA TCGGCATTGGTGGCGGTTT-ATAAG TTTTCACAAATGTTT TERM 1265 925526 - 925561 + r 100 -16.3 -4.06179 | gap 1, opp_overlap 925526, overlap 925517 CTTTTCCAAATGAAA CCGCCACCAA-GCTGA ATTTA TCGGCATTGGTGGCGG TTTATAAGTTTTCAC TERM 1266 925561 - 925526 - R 100 -14.1 -4.05788 | gap 1, opp_overlap 925526 925517 CTTTTCCAAATGAAA CCGCCACCAA-GCTGA ATTTA TCGGCATTGGTGGCGG TTTATAAGTTTTCAC LVIS_0898 925774 - 925586 - | 4-oxalocrotonate tautomerase LVIS_0899 926741 - 925857 - | hypothetical protein LVIS_0900 927021 - 928436 + | dipeptidase TERM 1267 929328 - 929315 - g 77 -6.7 -4.56597 | TGTGCTTGGTAAAAA CCAAG TCAA CTTGG GAAACATTACTTACG LVIS_0901 928482 - 929990 + | amino acid transporter TERM 1268 930003 - 930039 + F 100 -11 -4.70659 | gap 1, opp_overlap 930010, overlap 930008 TAAGTCAATTTATCT TTC-AAGAGTCCGGGAC AGCA GTTCCGGACTCTTTGTA TTTTTAAATATCGGG TERM 1269 930008 - 930033 + F 100 -15.5 -4.56791 | opp_overlap 930010, overlap 930003 CAATTTATCTTTCAA GAGTCCGGGAC AGCA GTTCCGGACTC TTTGTATTTTTAAAT TERM 1270 930031 - 930010 - f 73 -10.1 -3.03243 | opp_overlap 930008 930003 ATTTATCTTTCAAGA GTCCGGGAC AGCA GTTCCGGAC TCTTTGTATTTTTAA LVIS_0902 930155 - 930979 + | XRE family transcriptional regulator TERM 1271 931029 - 930997 - f 100 -17.2 -4.74103 | opp_overlap 930997 CGTTCAACTTAAAAA GCGACTGCAGAATT CTGAC AATTCCGCAGTCGC TTTTTAAGTAATGAA TERM 1272 930997 - 931029 + F 100 -15 -4.68593 | opp_overlap 930997 CGTTCAACTTAAAAA GCGACTGCAGAATT CTGAC AATTCCGCAGTCGC TTTTTAAGTAATGAA LVIS_0904 931764 - 932186 + | hypothetical protein TERM 1273 932255 - 932209 - f 100 -13.2 -3.60525 | opp_overlap 932215, overlap 932215 CGGATTGACAGACAA CTAAAATGACCCGAGATTATCA ATT TGGCAATCTTGGGTCATTTTTG TGCAACTGAGTGCGT TERM 1274 932249 - 932215 - f 100 -10.8 -4.5464 | opp_overlap 932215, overlap 932209 GACAGACAACTAAAA TGACCCGAGATTATCA ATT TGGCAATCTTGGGTCA TTTTTGTGCAACTGA TERM 1275 932215 - 932249 + F 100 -13 -4.84359 | opp_overlap 932215 932209 GACAGACAACTAAAA TGACCCGAGATTATCA ATT TGGCAATCTTGGGTCA TTTTTGTGCAACTGA LVIS_0905 932391 - 932936 + | acetyltransferase TERM 1276 932953 - 932992 + T 100 -11.8 -4.7497 | gap 1, opp_overlap 932953 932957, overlap 932957 CCGCAGCCACTAAAA TAAACCGGTATT-TCAG CACTTAA CTGAAAATACCGGTTTA TTTTTAATAACTGAC TERM 1277 932992 - 932953 - T 100 -12.5 -4.2828 | gap 1, opp_overlap 932953 932957, overlap 932957 CCGCAGCCACTAAAA TAAACCGGTATTT-CAGC ACTTA ACTGAAAATACCGGTTTA TTTTTAATAACTGAC TERM 1278 932957 - 932988 + T 100 -8.2 -4.91852 | gap 1, opp_overlap 932953 932957, overlap 932953 AGCCACTAAAATAAA CCGGTATT-TCAG CACTTAA CTGAAAATACCGG TTTATTTTTAATAAC TERM 1279 932988 - 932957 - T 100 -8.9 -4.7261 | gap 1, opp_overlap 932957 932953, overlap 932953 AGCCACTAAAATAAA CCGGTATTT-CAGC ACTTA ACTGAAAATACCGG TTTATTTTTAATAAC LVIS_0906 934496 - 933030 - | catalase TERM 1280 935543 - 935559 + G 74 -9.5 -3.57263 | opp_overlap 935537 GAAGCCAAACTCGCA GTCATTG CAC CAATGAC TTTGGGAGTGACGGT LVIS_0907 935054 - 936118 + | GTPase TERM 1281 936176 - 936142 - T 88 -9.5 -4.26076 | gap 1, opp_overlap 936145, overlap 936145 TGATTGCTATTAAAA GAACGATGGTCTACCA CAAC TGGTA-ACCATCGTTT TTAGATTACTTTTCA TERM 1282 936145 - 936173 + T 100 -11.2 -4.788 | gap 1, opp_overlap 936142 936145 TTGCTATTAAAAGAA CGATGGTCTACCA CAAC TGGTA-ACCATCG TTTTTAGATTACTTT TERM 1283 936173 - 936145 - T 100 -11.2 -4.25256 | gap 1, opp_overlap 936145, overlap 936142 TTGCTATTAAAAGAA CGATGGTCTACCA CAAC TGGTA-ACCATCG TTTTTAGATTACTTT LVIS_0908 937232 - 936225 - | Aryl-alcohol dehydrogenase related enzyme LVIS_0909 937344 - 937697 + | transcriptional regulator TERM 1284 937701 - 937743 + T 80 -10.1 -3.66556 | gap 1, opp_overlap 937706, overlap 937706 CTTGCTGAGTAAACT AAAAATAGCAGCATACC-CA TGAT TGAGGTACGCTGCTATTTTA TTATATTCGGCAATT TERM 1285 937706 - 937738 + T 100 -10 -4.90381 | gap 1, opp_overlap 937706, overlap 937701 TGAGTAAACTAAAAA TAGCAGCATACC-CA TGAT TGAGGTACGCTGCTA TTTTATTATATTCGG TERM 1286 937738 - 937706 - T 100 -12.2 -5.01811 | gap 1, opp_overlap 937706 937701 TGAGTAAACTAAAAA TAGCAGCATACC-CA TGAT TGAGGTACGCTGCTA TTTTATTATATTCGG LVIS_0910 938599 - 937781 - | transcriptional regulator TERM 1287 938501 - 938490 - G 74 -4.4 -5.00616 | GCCCGTGTTAAAAAA TGCT TTCC AGCA GCTGTTAAATTGATC TERM 1288 938635 - 938609 - H 78 -10.2 -3.32159 | opp_overlap 938609 CGACATTAAATTTAA CTCGGCTGTTTT TTG AAAACTACCGAG TTGTGCGGTTTCTAC TERM 1289 939023 - 939041 + G 71 -3 -4.90471 | AGCGTCATGGATTTA CAACCGGG TGA CCATGTTG TTTTATCTTTTGCAT LVIS_0911 938795 - 939883 + | Zn-dependent alcohol dehydrogenase TERM 1290 939944 - 939908 - T 100 -11.6 -5.01732 | opp_overlap 939908 AATCGGCTCAAAAAA TCGAGTCTCCGCGACG TTTTC CATCGTGGAAACCCGA TTTTTATTTTCATCA TERM 1291 939908 - 939944 + T 95 -7.2 -5.50723 | opp_overlap 939908 AATCGGCTCAAAAAA TCGAGTCTCCGCGACG TTTTC CATCGTGGAAACCCGA TTTTTATTTTCATCA LVIS_0912 940643 - 940011 - | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein TERM 1292 940935 - 940953 + H 100 -12.4 -5.19275 | AAAGATTAGTCCCTG CGGGTGTC ATT GGCACCCG TTTTGTTTTGTGAAT LVIS_0913 940991 - 941107 + | hypothetical protein LVIS_0914 941319 - 941549 + | hypothetical protein TERM 1293 941605 - 941653 + F 79 -11.2 -2.99204 | opp_overlap 941610, overlap 941610 AAAAATATTTTGCCT TAAAAGCATCAGCTTCAGGAAC AACAC GTCCTTGGAGTTGATGCTTTTC TGTGTCAGTTTACTT TERM 1294 941648 - 941610 - f 73 -7.4 -4.07885 | opp_overlap 941610 941605 TATTTTGCCTTAAAA GCATCAGCTTCAGGAACA ACA CGTCCTTGGAGTTGATGC TTTTCTGTGTCAGTT TERM 1295 941610 - 941648 + F 100 -11.1 -4.62471 | opp_overlap 941610, overlap 941605 TATTTTGCCTTAAAA GCATCAGCTTCAGGAAC AACAC GTCCTTGGAGTTGATGC TTTTCTGTGTCAGTT LVIS_0915 941920 - 942885 + | hypothetical protein TERM 1296 942920 - 942954 + T 100 -23 -4.78572 | opp_overlap 942920 CATATTCATCAGAAA GGCCCACATCACTGGT TAA ACCAGCGATGTGGGCC TTTTCTTAATTACCA TERM 1297 942954 - 942920 - T 100 -25.2 -3.98661 | opp_overlap 942920 CATATTCATCAGAAA GGCCCACATCACTGGT TAA ACCAGCGATGTGGGCC TTTTCTTAATTACCA LVIS_0916 944803 - 942983 - | hypothetical protein TERM 1298 943471 - 943485 + g 85 -11.4 -3.72576 | CAACAATGCTACCAT CGGCAC TTT GTGCCG TTTCATAGGCCACCC TERM 1299 945073 - 945093 + r 76 -6.9 -4.51238 | AACCGCCATTTTTTA TGAGTTTCG TTG TGAGACTCA TTTATATTTTATAGC TERM 1300 945202 - 945178 - R 80 -4.9 -5.12068 | CACACCTAATAAAAA GCCAGTCCCCA TAA TCGGAACCAGC TCACAACGCTTTATT LVIS_0917 945539 - 945225 - | hypothetical protein LVIS_0918 945820 - 946260 + | response regulator LVIS_0919 946257 - 946715 + | hypothetical protein TERM 1301 946738 - 946774 + T 100 -16.1 -4.3534 | opp_overlap 946738 TCTCTCAATCTAAAA GGTCAACGTTCAGAA TATGTGC TTCTGAGCGTTGACC TTTTCCTGATTAGCA TERM 1302 946774 - 946738 - T 100 -13.9 -4.27316 | opp_overlap 946738 TCTCTCAATCTAAAA GGTCAACGTTCAGAA TATGTGC TTCTGAGCGTTGACC TTTTCCTGATTAGCA LVIS_0920 946857 - 946747 - | hypothetical protein LVIS_0921 947385 - 946870 - | amidase TERM 1303 947714 - 947724 + r 79 -6.8 -4.67982 | opp_overlap 947713 ACTTTTGCTTAAATC GCTG GGT CAGC TTTTGTTCACTCGCC LVIS_0922 948017 - 947697 - | pyrophosphatase TERM 1304 948113 - 948141 + r 100 -14 -4.64766 | gap 1, opp_overlap 948113 AATAGCTGAAAAAAA CGCTCG-CCATTC CTAC GAATGGGCGAGCG TTTTTCAAATCTAAG TERM 1305 948141 - 948113 - R 100 -14 -5.46629 | gap 1, opp_overlap 948113 AATAGCTGAAAAAAA CGCTCG-CCATTC CTAC GAATGGGCGAGCG TTTTTCAAATCTAAG LVIS_0923 948783 - 948262 - | hypothetical protein LVIS_0924 949585 - 948794 - | biotin operon repressor LVIS_0925 950356 - 949598 - | enoyl-(acyl carrier protein) reductase LVIS_0926 951154 - 950387 - | Acetyl-CoA carboxylase alpha subunit LVIS_0927 951987 - 951154 - | Acetyl-CoA carboxylase beta subunit TERM 1306 951547 - 951531 - GR 73 -5.1 -4.64334 | overlap 951535 951536 AAGCCGTGAACAAAA TAACCGG CAA CCGTTTA GCCGTCGCCTCATCA LVIS_0928 953365 - 951944 - | biotin carboxylase TERM 1307 952384 - 952402 + gr 75 -10.3 -2.85847 | opp_overlap 952381 952380 952384 CTTGGGTAAAACCCA GTGGCTG ATTAG CAGCCAC TCTAATCTGGGCCTT TERM 1308 952402 - 952384 - GR 75 -10.3 -2.74605 | opp_overlap 952384, overlap 952381 952380 CTTGGGTAAAACCCA GTGGCTG ATTAG CAGCCAC TCTAATCTGGGCCTT TERM 1309 952722 - 952741 + gr 75 -5.8 -4.61231 | gap 1, opp_overlap 952722, overlap 952725 ACCTGCATTTCAATA TGT-TTGGC TTG GCCAATACA TTTTTCCAAATATAC LVIS_0929 953772 - 953362 - | 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase LVIS_0930 954212 - 953787 - | biotin carboxyl carrier protein TERM 1310 954015 - 953991 - G 91 -13.6 -3.34398 | opp_overlap 953984, overlap 953989 TGCCGGTGCCAAATA CACGACGCCA ACTAA TGGCGCCGTG ATGGTCGGTTCTGCA LVIS_0931 955444 - 954218 - | 3-oxoacyl-(acyl-carrier-protein) synthase TERM 1311 955367 - 955380 + g 71 -3.9 -4.72386 | opp_overlap 955367 AACGCCGGTAAATAG GTTAT CCAA ATAAC TTTTTACATCATTTC LVIS_0932 956186 - 955461 - | 3-oxoacyl-acyl carrier protein reductase LVIS_0933 957100 - 956186 - | (acyl-carrier-protein) S-malonyltransferase LVIS_0934 957358 - 957110 - | Acyl carrier protein LVIS_0935 958364 - 957381 - | 3-oxoacyl-(acyl carrier protein) synthase III LVIS_0936 958828 - 958361 - | transcriptional regulator TERM 1312 958636 - 958650 + g 76 -7.2 -4.39426 | GATTCAGTGTCTTCG CAACTT CTG AAGTTG TTTTGTGAGAATGTA LVIS_0937 959299 - 958853 - | 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 1313 959002 - 958990 - G 73 -5.5 -4.60073 | CATATAATGACAAAA CATCC CCT GGACG GACAACTTTTCTGAA TERM 1314 959636 - 959679 + r 89 -6.1 -5.29445 | gap 1, opp_overlap 959643, overlap 959643 AATCGTAATGCCGAC AAAAAAACTGTGTCT-GCGC CAAAC GCGCCAGACACAGTTTATCA TTTTTCTTGTTCCAA TERM 1315 959643 - 959672 + r 100 -13 -4.30635 | gap 1, opp_overlap 959643, overlap 959636 ATGCCGACAAAAAAA CTGTGTCT-GCGC CAAAC GCGCCAGACACAG TTTATCATTTTTCTT TERM 1316 959672 - 959643 - R 100 -13 -5.61596 | gap 1, opp_overlap 959636 959643 ATGCCGACAAAAAAA CTGTGTCT-GCGC CAAAC GCGCCAGACACAG TTTATCATTTTTCTT LVIS_0938 959853 - 959677 - | hypothetical protein TERM 1317 959836 - 959825 - G 71 -7.2 -4.00756 | TATTGGATCAAATAA CGGC TTCG GCCG CCTTCAAACAATGGC TERM 1318 959985 - 960028 + r 100 -15.4 -4.30576 | opp_overlap 959985 CACACTTACAAAAAA GTATCCGCAAAACCAAAGCA AAAT TGCCTTGGACTTGCGGATAC TTTTAGTAGTGAAAC TERM 1319 960028 - 959985 - R 100 -19.8 -5.29782 | opp_overlap 959985 CACACTTACAAAAAA GTATCCGCAAAACCAAAGCA AAAT TGCCTTGGACTTGCGGATAC TTTTAGTAGTGAAAC rplS 960399 - 960043 - | 50S ribosomal protein L19 LVIS_0940 961277 - 960513 - | tRNA-(guanine-N1)-methyltransferase LVIS_0941 961795 - 961277 - | RimM protein, required for 16S rRNA processing TERM 1320 961897 - 961869 - R 100 -8.2 -5.71712 | gap 1 TTTTAGACAAAAAAA CTCGAG-GAAACG TTAC CGCCTCACTCGAG AGTCTTTGCTGGGCG LVIS_0942 962149 - 961889 - | RNA-binding protein rpsP 962434 - 962159 - | 30S ribosomal protein S16 LVIS_0944 962815 - 962522 - | hypothetical protein LVIS_0945 964125 - 962812 - | hypothetical protein LVIS_0946 965300 - 964128 - | ATPase TERM 1321 964741 - 964715 - G 84 -13.1 -3.23216 | gap 1, overlap 964717 GGGGATGACCATCAA CAGTGGCTGTCG CCCA CGACAGCCAC-G AACGAATACCTGCTT TERM 1322 964740 - 964717 - G 100 -16.8 -3.18023 | overlap 964715 GGATGACCATCAACA GTGGCTGTCG CCCA CGACAGCCAC GAACGAATACCTGCT TERM 1323 965356 - 965336 - R 75 -5.3 -4.88918 | overlap 965339 TTACTTTAAACAAAA CAGCGCCCA GCT CAGTCGCTG CTACTCACTAAATTG LVIS_0947 968099 - 965451 - | cation transport ATPase TERM 1324 968195 - 968148 - R 100 -12.2 -5.07652 | TTCTGTAAAAGAAAA TGAGACCCATGCATGCACACAA ATAA TTGTGAACACACATAAGTCTCA CTATTTAAGGCAATC TERM 1325 969454 - 969480 + r 71 -9.4 -3.05562 | overlap 969445 TACCGGCCCCTTGTA GCCCGACCATCA TGA TGATTGTCGGGA TCTTGGCGGATTTAT LVIS_0949 970139 - 969798 - | hypothetical protein TERM 1326 970304 - 970274 - R 100 -10.5 -5.63103 | overlap 970300 GTTTAACCAAAAAAA CGTACCAATCGCC AGCTA GGCAATTAGCACG TCTGCGCTTTATTTA LVIS_0950 971776 - 970313 - | Signal recognition particle GTPase TERM 1327 971290 - 971310 + g 71 -8.3 -3.62224 | overlap 971291 GTGCCGAGGCGTCAG TTGTCGAAG ACT CTTCGACGG TTGTTGCAGGCGTCT TERM 1328 971501 - 971534 + g 85 -12.5 -3.3382 | overlap 971527 ACCCGCTTCAACCGC TGCATCGCTAGTAGC GGTC GCTGCCAGTGATGCA TTAGTATCTGCTGAA TERM 1329 971610 - 971644 + g 72 -10.7 -2.59564 | overlap 971607 971604 971609 ACCTCGCTGGTTTCT GCTGCGGCAGATGCT TCACT AGCAACTGACGTAGC GTTATCAGCTGCCGA LVIS_0951 975333 - 971782 - | chromosome segregation ATPase TERM 1330 972773 - 972724 - G 72 -10.5 -3.05384 | opp_overlap 972720 972756 972761 TTGGGCCTGAGCCAA CTGCGCCTGGGCATCAGCGGGCG TTAA CGCCTGCTGACGGTCAAGCTCTG CCAGCTTAGTTGTGG TERM 1331 973308 - 973328 + g 72 -6.1 -4.44046 | GTAACTCTTGTTGTT GCCGTAACA CAC TGCTATGGC TTTGTTTGGACTGAC TERM 1332 973647 - 973667 + g 76 -9.7 -3.78775 | opp_overlap 973645 GATCCCGCAGATACC CGACCGC CGCCTTC GCGGTCG TTTCATCGTCAACGA TERM 1333 973915 - 973929 + g 77 -5 -4.89233 | CTGCCAGTTGTGCTG CAATGC TTG GTATTG TTTTTGGTGTTGCTG TERM 1334 974795 - 974805 + g 70 -2.4 -5.00412 | ATGGTGTCGTCTAAC TCGC GTT GCGC TTTTTCCTTATGTTT LVIS_0952 976036 - 975347 - | dsRNA-specific ribonuclease TERM 1335 976101 - 976074 - R 100 -9.8 -4.71061 | gap 1, opp_overlap 976066 ACTTAGATTGAAAAA GCCCGGGACGACA GGT TG-CGGCCCGGAC TCGCTCAATGTTTAC LVIS_0953 976364 - 976113 - | Acyl carrier protein LVIS_0954 977489 - 976452 - | putative glycerol-3-phosphate acyltransferase PlsX LVIS_0955 979535 - 977502 - | RecG-like helicase TERM 1336 979600 - 979563 - R 100 -10.7 -4.82901 | opp_overlap 979564, overlap 979564 979572 CTCCCGTCATAAAAA GCGAAAAAAGACTGGAC AAGT GCCCAATCTTTCTTCGT TAAGTGACCGTTATT TERM 1337 979599 - 979564 - R 100 -14.2 -3.49419 | opp_overlap 979564, overlap 979563 979572 TCCCGTCATAAAAAG CGAAAAAAGACTGGAC AAGT GCCCAATCTTTCTTCG TTAAGTGACCGTTAT TERM 1338 979591 - 979572 - R 89 -6.4 -5.30575 | opp_overlap 979564, overlap 979564 979563 TAAAAAGCGAAAAAA GACTGGAC AAGT GCCCAATC TTTCTTCGTTAAGTG LVIS_0956 981308 - 979611 - | dihydroxyacetone kinase-like protein TERM 1339 980320 - 980338 + g 80 -8.2 -4.46854 | overlap 980321 TCCGCAGCAGCTTCT TCATCATG TTC CATGATGG TTTCTTGTTGCATCC TERM 1340 980321 - 980337 + g 73 -9.5 -3.27389 | overlap 980320 CCGCAGCAGCTTCTT CATCATG TTC CATGATG GTTTCTTGTTGCATC TERM 1341 980744 - 980730 - G 77 -8.6 -4.1891 | GGCCTCTAAGACAAA GGTCAA TCC TTGACC ACCAGAATCGACAAC TERM 1342 980840 - 980869 + g 77 -10.1 -3.45027 | opp_overlap 980828 980842 980849 980851, overlap 980838 980851 AAATAGCGTCCATGA CAGCTAAGACATC ATCA GATGATTTAGCTG TGTTTAATCCCGCCT LVIS_0957 981703 - 981341 - | hypothetical protein LVIS_0958 981938 - 982123 + | ribosomal protein L28 TERM 1343 982173 - 982149 - T 100 -9.4 -5.36441 | gap 1, opp_overlap 982149 CGGTTATATAAAAAA CACGAACCCAG CATG CTGG-TTCGTG TTTTTTTGTGTTCTG TERM 1344 982149 - 982173 + T 100 -9.4 -5.84432 | gap 1, opp_overlap 982149 CGGTTATATAAAAAA CACGAACCCAG CATG CTGG-TTCGTG TTTTTTTGTGTTCTG TERM 1345 982243 - 982222 - T 100 -9.4 -5.47218 | opp_overlap 982220 982222 TTTGATGCAAAAAAA GCCCGGGA ACTTTA TCCCAGGC TCTTAATTTATTCAT LVIS_0959 982925 - 982251 - | thiamine pyrophosphokinase LVIS_0960 983578 - 982925 - | Pentose-5-phosphate-3-epimerase LVIS_0961 984487 - 983591 - | GTPase TERM 1346 984583 - 984553 - R 91 -6.2 -5.55664 | TCACCATTAAAAAAA CTCAGTCCCCTTTT ATT ATAAAAGAACTGAG TCAGAATTGCAGGTG LVIS_0962 986614 - 984605 - | serine/threonine kinase protein TERM 1347 985603 - 985619 + g 88 -11.5 -3.9243 | GTAAAAATTTTCGCC GGCGCGG GTG CCGCGTC TTCTTTCGCCCCTTG LVIS_0963 987360 - 986614 - | Serine/threonine protein phosphatase LVIS_0964 988715 - 987372 - | tRNA and rRNA cytosine-C5-methylase LVIS_0965 989659 - 988715 - | methionyl-tRNA formyltransferase TERM 1348 988882 - 988896 + g 77 -4.2 -5.14563 | opp_overlap 988873 GACTAACGACTGCGC CGGGCT GTA AGTCTG TTTTTTGGTCCAAAA LVIS_0966 992099 - 989682 - | primosomal protein N' TERM 1349 990249 - 990209 - G 73 -7.5 -4.18494 | TATCGGCATTCAAAA CACCAACGAGCGTAACATC TGG GAAGTCAAGCCCCTTGGCG ATCATCTGCGTCCCC TERM 1350 991005 - 990989 - G 78 -9.3 -3.99374 | GGGCACCAACAACAA CCGTGGC TTC GCCGCGG TCAATCCGGCGCCAT TERM 1351 991886 - 991898 + g 75 -7.7 -4.18494 | opp_overlap 991886 GAGCTAGGTCTAAGA CCGAT GCA ATCGG TTTTAACTGCCCATC LVIS_0967 993322 - 992111 - | phosphopantothenoylcysteine synthetase/decarboxylase TERM 1352 992512 - 992487 - G 76 -8.3 -4.08767 | GTGACTGGCTGAAAA TCAGCCACGGC AGCT GCCATGACTAA TACATCCGCATTAGG TERM 1353 993398 - 993373 - R 100 -6.1 -5.60993 | opp_overlap 993374, overlap 993374 GTCTTGATAAAAAAA GCCAGATTACC CAAT GGCAACCTGGT CTTTACCGAACGCTT TERM 1354 993397 - 993374 - R 83 -9.6 -3.95873 | opp_overlap 993374, overlap 993373 TCTTGATAAAAAAAG CCAGATTACC CAAT GGCAACCTGG TCTTTACCGAACGCT LVIS_0968 993632 - 993417 - | DNA-directed RNA polymerase, subunit K/omega LVIS_0970 994518 - 994841 + | hypothetical protein TERM 1355 994881 - 994848 - T 100 -16.9 -4.42238 | opp_overlap 994848 CGATGTTAACTAAAA TTGGCAGCTAAGCCC CGCG AGACTTAGCTGCCAA TTTTTGGCTCTAATG TERM 1356 994848 - 994881 + T 100 -14 -4.7173 | opp_overlap 994848 CGATGTTAACTAAAA TTGGCAGCTAAGCC CCGCGA GACTTAGCTGCCAA TTTTTGGCTCTAATG LVIS_0971 995352 - 994891 - | hypothetical protein TERM 1357 995460 - 995426 - R 100 -15.1 -3.89956 | opp_overlap 995426 GTACCATAGACTAAA GGCTGCTAGTTCGGT TATTT ATCGAACCAGCAGCC TTTTAAAGAGTGATC TERM 1358 995426 - 995460 + r 100 -15.1 -4.10161 | opp_overlap 995426 GTACCATAGACTAAA GGCTGCTAGTTCGGT TATTT ATCGAACCAGCAGCC TTTTAAAGAGTGATC LVIS_0972 997224 - 995530 - | DNA repair ATPase TERM 1359 996379 - 996363 - G 72 -5.7 -4.35604 | opp_overlap 996366 CTAACTGAGAAGAAA CGTCGCC CAC GGCATCG CTTAGCGCATAATAC TERM 1360 996811 - 996825 + g 71 -8.6 -3.67622 | overlap 996804 ATGCTTTTCTGGTTG CATCAG TTC CTGATG TTCATTTTGACCATG TERM 1361 997292 - 997247 - R 100 -8.9 -4.77165 | opp_overlap 997252 997256 CCTCCTAGAATAAAA GACCACGACTGCTTCGTCAGC ATGT GCTGGTCAGTCAGTCGTGGTC TCAAATCATCAATCC LVIS_0973 997756 - 997301 - | arginine repressor LVIS_0974 998664 - 997849 - | rRNA methylase LVIS_0975 999567 - 998665 - | geranylgeranyl pyrophosphate synthase TERM 1362 999468 - 999496 + g 76 -11.7 -2.91695 | overlap 999465 TTGCCGCCGCTAATT GGGCATCATGGCT ATC AGCCAAGATGGCC TGCTTTAACGGTGCA LVIS_0976 999802 - 999557 - | exonuclease VII small subunit xseA 1001150 - 999795 - | exodeoxyribonuclease VII large subunit TERM 1363 1000489 - 1000499 + g 73 -8.2 -3.82604 | CTCGCTGCAATCGCT CGGG CCA CCCG TTCTTCATTAAATGG TERM 1364 1000918 - 1000940 + g 88 -8.4 -4.77757 | opp_overlap 1000917 CCCGTAACTAAGACT TTCATGCCCG TTT CCGGCGTGAA TTTTAATTTTTCAAA LVIS_0978 1002003 - 1001137 - | 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase TERM 1365 1002142 - 1002118 - R 100 -7.9 -5.68023 | opp_overlap 1002118 TGACAACTAAAAAAA CCGCTTGCT CATTACC AGCAAACGG TTTGATCAATTAAGC nusB 1002580 - 1002152 - | transcription antitermination protein NusB TERM 1366 1002227 - 1002210 - G 76 -7 -4.42653 | ACCCCATTGATAAAA CGACGA GAACGA TCGTCG CTAAAGTTCTTGGCA LVIS_0980 1003020 - 1002580 - | hypothetical protein LVIS_0981 1003615 - 1003055 - | translation elongation factor P LVIS_0982 1004756 - 1003692 - | aminopeptidase P TERM 1367 1004829 - 1004791 - R 91 -7.5 -5.40474 | ATTTTCCGAAAAAAA GAAGAACCCAAAGCGAA TTGGT CTCGCCTCAAGCTCTTC AGTCGTACGAGGAAA TERM 1368 1004835 - 1004852 + r 74 -7.7 -3.98745 | overlap 1004837 CAAGCTCTTCAGTCG TACGAGG AAAA CCTCGTG TTATTTAGCTGCTTC TERM 1369 1004837 - 1004850 + r 70 -8.1 -3.57587 | overlap 1004835 AGCTCTTCAGTCGTA CGAGG AAAA CCTCG TGTTATTTAGCTGCT rpmA 1005152 - 1004853 - | 50S ribosomal protein L27 LVIS_0984 1005510 - 1005172 - | ribosomal protein LVIS_0985 1005847 - 1005539 - | ribosomal protein L21 LVIS_0986 1006538 - 1006011 - | transcriptional regulator TERM 1370 1006470 - 1006447 - G 73 -2.4 -5.08824 | overlap 1006450 GTCTGAGCTAAAAAA TCAGCTTTAT CCTG ATAATGCAGA TAAAAAGTTCCTCGT TERM 1371 1006668 - 1006643 - R 100 -14.1 -4.63218 | CCTTTCCTAACAAAA GGCTAGTCCGA AAAC TCGAACTAGCC CCCATTTGCTAATAA LVIS_0987 1007219 - 1006677 - | dUTPase TERM 1372 1007136 - 1007157 + g 90 -14.5 -2.88708 | overlap 1007131 1007127 TTCAATTTGCTGCTG CCGCGACAT TTCA ATGTCGCGG TCTCGTGTAATCTGT LVIS_0988 1008175 - 1007234 - | hypothetical protein LVIS_0989 1009040 - 1008168 - | hypothetical protein TERM 1373 1009275 - 1009246 - R 100 -9.4 -4.80882 | gap 1, opp_overlap 1009246 ATTGTACACCAAAAA CTGGCCATCACCT ATTTA AGG-GATGACCAG TTTTAACGTGCTAAT TERM 1374 1009246 - 1009275 + r 73 -7.2 -4.15833 | gap 1, opp_overlap 1009246 ATTGTACACCAAAAA CTGGCCATCACCT ATTTA AGG-GATGACCAG TTTTAACGTGCTAAT LVIS_0990 1010633 - 1009293 - | glutamine synthetase LVIS_0991 1011061 - 1010675 - | glutamine synthetase repressor LVIS_0992 1012091 - 1011168 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1375 1011802 - 1011790 - G 77 -2.6 -5.27335 | GCTTGCAAATAAAAA CCGG TCCCC CCAG CTACAATTGGCAAAT LVIS_0993 1012843 - 1012088 - | glycerophosphoryl diester phosphodiesterase TERM 1376 1012275 - 1012305 + g 76 -7.5 -4.44046 | overlap 1012271 CATCGAATATCCGGA TGGAGCCCCGCGA CTTGT TGGTGGCGCTCCA TTTGTTTCGCCTGCC TERM 1377 1013000 - 1013010 + G 70 -2.4 -4.90525 | overlap 1013003 TGTTATGAAGAACTT CACC AAA GGCG TTTTGTTTGGCGTTG TERM 1378 1013044 - 1013055 + G 88 -2.2 -5.79595 | overlap 1013038 CTACGGCTAGTGCGG TTGC CGGC GCAG TTTTTTCTTTTAAGA LVIS_0994 1012989 - 1013165 + | hypothetical protein TERM 1379 1013167 - 1013219 + T 100 -5.8 -5.79588 | gap 1, opp_overlap 1013182, overlap 1013182 CCCACCATGGGTAAT TTAGTCAC-CAAAAAAGGTCCGGAA ATTT TTCCGGACCTTTTTTTAGTCTTTAG TTTTTTTAGTTTTAC TERM 1380 1013203 - 1013182 - T 100 -14.5 -5.1675 | opp_overlap 1013182 1013167 TTAGTCACCAAAAAA GGTCCGGAA ATTT TTCCGGACC TTTTTTTAGTCTTTA TERM 1381 1013182 - 1013203 + T 100 -14.5 -5.66989 | opp_overlap 1013182, overlap 1013167 TTAGTCACCAAAAAA GGTCCGGAA ATTT TTCCGGACC TTTTTTTAGTCTTTA LVIS_0995 1013625 - 1013209 - | rhodanese-related sulfurtransferase LVIS_0996 1014627 - 1013656 - | transcriptional regulator/sugar kinase TERM 1382 1013910 - 1013896 - G 74 -4.2 -4.90525 | overlap 1013898 CAACCCTAAATAAAA GGTGAC CCG GTCAAC CACTTGGTTTGCCAA LVIS_0997 1014862 - 1014632 - | hypothetical protein LVIS_0998 1015585 - 1014905 - | membrane-associated serine protease TERM 1383 1015263 - 1015245 - G 100 -5.2 -5.75538 | overlap 1015246 TTTAAAAAACAAAAA CTGGCAAC ATT GCCGCCAA TTCCAGCCACTAAAA TERM 1384 1015549 - 1015504 - G 76 -9.9 -3.69068 | gap 1, opp_overlap 1015508 1015510, overlap 1015502 1015508 TCATCGCAACAAAGA CTAACACCATA-ATGACGACTA ATC CAGTCGTCATATAGGGTGTCTG GTTCAAATTTCGTAG TERM 1385 1015545 - 1015508 - G 83 -11.5 -3.54382 | gap 1, opp_overlap 1015508 1015510, overlap 1015504 1015502 CGCAACAAAGACTAA CACCATA-ATGACGACTA ATC CAGTCGTCATATAGGGTG TCTGGTTCAAATTTC TERM 1386 1015508 - 1015545 + g 74 -10.8 -2.9296 | gap 1, opp_overlap 1015504 1015502 1015508, overlap 1015510 CGCAACAAAGACTAA CACCATA-ATGACGACT AATCC AGTCGTCATATAGGGTG TCTGGTTCAAATTTC LVIS_0999 1016149 - 1015601 - | 5-formyltetrahydrofolate cyclo-ligase TERM 1387 1015909 - 1015898 - G 71 -7.2 -4.01737 | ATCAACAACATGAAA CGCC ATCT GGCG ATTAGGAAGCGTTGT TERM 1388 1016212 - 1016191 - R 100 -7.9 -5.83226 | opp_overlap 1016191 1016183 AATTCAACAAAAAAA GGTGCGGAC TCTC GCCCGTACC TTACTTAGTTTCACG LVIS_1000 1016362 - 1016213 - | ribosomal protein L33 TERM 1389 1016275 - 1016285 + g 71 -8.2 -3.62522 | opp_overlap 1016275, overlap 1016281 ATTTCTTAAATTCAA CCCG GTC CGGG TTATTACGCCGGTTC LVIS_1001 1018664 - 1016550 - | cell division protein FtsI/penicillin-binding protein 2 TERM 1390 1018905 - 1018876 - R 100 -11.5 -4.39287 | TCAAGCACACTAAAA CACGGATCAGAGA TTTC CCTCTCATCCGTG AGATACCTCGGCAAC LVIS_1002 1019140 - 1018931 - | hypothetical protein TERM 1391 1019566 - 1019549 - g 71 -9.1 -3.57792 | opp_overlap 1019548 1019545 TTATCTATCGTCAAA TGGCGCC ATTT GGCACCA GTAGCTTGTTAACTG LVIS_1003 1019440 - 1022070 + | hypothetical protein TERM 1392 1022089 - 1022115 + T 100 -10.2 -5.19212 | opp_overlap 1022089 AGTCCATTATAAAAA CGCATGACCG CAAAAAC TGGTCATGCG TTTTTTACTAGTGAT TERM 1393 1022115 - 1022089 - T 100 -9.5 -4.91511 | gap 1, opp_overlap 1022089 AGTCCATTATAAAAA CGCATGACC-GC AAAA ACTGGTCATGCG TTTTTTACTAGTGAT LVIS_1004 1022431 - 1022123 - | hypothetical protein TERM 1394 1022380 - 1022358 - G 74 -2.7 -5.09225 | gap 1, overlap 1022359 ACTTTACCGAAAAAA CGAATG-CCG CGGC CGGTCATTCC CATATCCTCACGAAA TERM 1395 1022704 - 1022732 + r 77 -10.4 -3.15124 | opp_overlap 1022704, overlap 1022702 1022694 CAAAGGTATAAAAAA GATTCAGCCC CTTTAACTA GGGCTGAATC TCTTAAATGCTTTTA TERM 1396 1022732 - 1022704 - R 100 -11.1 -5.33866 | opp_overlap 1022704 1022702 1022694 CAAAGGTATAAAAAA GATTCAGCCCC TTTAACT AGGGCTGAATC TCTTAAATGCTTTTA LVIS_1005 1023143 - 1022745 - | transcription elongation factor TERM 1397 1023129 - 1023142 + g 71 -3.1 -4.87626 | gap 1 CCGATCGATCACCTT TGG-GC GTT GCACCA TTTTTAATCTTCGAG LVIS_1006 1023217 - 1023146 - | hypothetical protein TERM 1398 1023295 - 1023316 + r 78 -10.2 -3.33998 | opp_overlap 1023295, overlap 1023293 1023291 1023288 ATCACTTGTAGAAAA GGTTAGCC ACGCTG GGCTAACC TGTCTTATTCTATAT TERM 1399 1023316 - 1023295 - R 100 -10.2 -4.3898 | opp_overlap 1023295 1023293 1023291 1023288 ATCACTTGTAGAAAA GGTTAGCC ACGCTG GGCTAACC TGTCTTATTCTATAT LVIS_1007 1023997 - 1023326 - | uridine kinase LVIS_1008 1025149 - 1024013 - | aminodeoxychorismate lyase TERM 1400 1024781 - 1024791 + g 75 -5.4 -4.75288 | ACCTCCCTTTTGTAA TTGC ATG GCAA TTTGTTTTAGTGTCA TERM 1401 1025266 - 1025291 + r 100 -11.1 -4.63486 | opp_overlap 1025266 CATGCCTCGTAAAAA CGCGGTTAGCC CTCA GGCCAATCGCG TTTTATTACCAGAAT TERM 1402 1025291 - 1025266 - R 100 -11.1 -4.57073 | opp_overlap 1025266 CATGCCTCGTAAAAA CGCGGTTAGCC CTCA GGCCAATCGCG TTTTATTACCAGAAT pheT 1027714 - 1025306 - | phenylalanyl-tRNA synthetase subunit beta LVIS_1010 1028770 - 1027724 - | phenylalanyl-tRNA synthetase alpha subunit TERM 1403 1028842 - 1028816 - R 100 -8.1 -5.76237 | gap 1 TAGACAAATAAAAAA GCTCCGT-CCTA AAAC TAGGGACGAAGC ATCGCGGTACCACCC LVIS_1011 1029478 - 1029104 - | transcriptional regulator LVIS_1012 1030010 - 1029513 - | HD superfamily hydrolase LVIS_1013 1030905 - 1030135 - | rRNA methylase LVIS_1014 1031012 - 1031284 + | acylphosphatase LVIS_1015 1031387 - 1032289 + | preprotein translocase subunit YidC TERM 1404 1032299 - 1032323 + T 100 -10 -5.74288 | opp_overlap 1032299 CGATAATCAAAAAAA GATCGCCGAC TTTTT GTCGACGATC TTTTTTATTCTTTCT TERM 1405 1032323 - 1032299 - T 100 -12.2 -5.68023 | opp_overlap 1032299 CGATAATCAAAAAAA GATCGCCGAC TTTTT GTCGACGATC TTTTTTATTCTTTCT LVIS_1016 1032842 - 1032438 - | hypothetical protein TERM 1406 1032861 - 1032882 + r 89 -10.3 -3.9461 | AGCTCCCCCTATTTA GTTAGTTAC TATA GTAACTAAC TTGTTGTTAACAGCA TERM 1407 1032981 - 1032951 - R 100 -7.7 -5.26316 | opp_overlap 1032951 TTATCGTATAAAAAA TCCGATTTAAGTC AACTA AACTCAAACCGGA TTTTTTATTTTATTC TERM 1408 1032951 - 1032981 + r 93 -2.6 -5.92399 | opp_overlap 1032951 TTATCGTATAAAAAA TCCGATTTAAGT CAACTAA ACTCAAACCGGA TTTTTTATTTTATTC LVIS_1017 1034601 - 1032991 - | Signal transduction histidine kinase TERM 1409 1034543 - 1034533 - G 77 -4.6 -4.88918 | overlap 1034528 CCACTTCAAAGAAAA CCGA AAC CCGG CCTTCTTAGGCGCAA LVIS_1018 1035284 - 1034598 - | DNA-binding response regulator LVIS_1019 1035700 - 1036716 + | alcohol dehydrogenase TERM 1410 1036779 - 1036749 - T 100 -14.3 -5.27477 | opp_overlap 1036749 ATTTGAATTAAAAAA GCAATTCTGAAAA AGTCA TTTTCAGAATTGC TTTTTTTAGTTATTG TERM 1411 1036749 - 1036779 + T 100 -14.3 -5.71638 | opp_overlap 1036749 ATTTGAATTAAAAAA GCAATTCTGAAAA AGTCA TTTTCAGAATTGC TTTTTTTAGTTATTG LVIS_1020 1037494 - 1036841 - | Zn-dependent protease TERM 1412 1037465 - 1037447 - G 85 -5.8 -5.06414 | TTGGGGTAAGAAAAA GCAGGCCC CTA GCGCCAGC AAGAACAGAAAACCC TERM 1413 1037709 - 1037684 - R 91 -6.9 -5.46657 | gap 1, opp_overlap 1037682 1037684 CACGCCAATAAAAAA CGGTCGCGACTA AGT TAGTC-CGAACG TCTGTTTAATCGTGA LVIS_1021 1038029 - 1037715 - | transcriptional regulator TERM 1414 1038010 - 1037990 - G 82 -10.5 -3.92602 | opp_overlap 1037990 TCAATACTTTATAAA TCTTAACGG CTT CCGCTAAGA TTGCATCATTAATGG LVIS_1022 1038853 - 1038044 - | HAD superfamily hydrolase TERM 1415 1038924 - 1038953 + r 70 -5.7 -4.33165 | gap 1, opp_overlap 1038924 TGGAAACACAAAAAA GCCCCTA-GAAGCC GCG GACTTCATAGGAGC TTTTCATCGATTTAG TERM 1416 1038953 - 1038924 - R 100 -10.1 -5.56264 | gap 1, opp_overlap 1038924 TGGAAACACAAAAAA GCCCCTA-GAAGCC GCG GACTTCATAGGAGC TTTTCATCGATTTAG rpmF 1039153 - 1038965 - | 50S ribosomal protein L32 TERM 1417 1039121 - 1039131 + g 71 -6.8 -4.21908 | ACGCATACGCTTTTT CGTC TTA GACG TTTTCCGTGCTGGTA LVIS_1024 1039774 - 1039220 - | metal-binding protein TERM 1418 1039272 - 1039283 + g 71 -3 -4.99043 | TTTGCAAGACGTGGA TCAA CTGG TTGA TTTTCTTTCTCAACG LVIS_1025 1040996 - 1039848 - | hypothetical protein TERM 1419 1040062 - 1040077 + g 71 -10.4 -2.78596 | opp_overlap 1040052 1040051 1040061 1040059 1040062 AGAACCCGCAAATAT TGCGGC TGTG GCCGCA TCTCCTCGGGCAGTG LVIS_1026 1041741 - 1040998 - | SAM-dependent methyltransferase TERM 1420 1041697 - 1041671 - G 76 -7.4 -4.36914 | gap 1 CGGTCGGTCACAAAA TCCAGCCACTG GTCATA CA-TGGCTGGA TCAAAAAGTTCATCG LVIS_1027 1042094 - 1041738 - | Iojap family protein LVIS_1028 1042713 - 1042120 - | HD superfamily NAD metabolism hydrolase LVIS_1029 1043338 - 1042706 - | nicotinic acid mononucleotide adenylyltransferase LVIS_1030 1043660 - 1043352 - | RNA-binding protein TERM 1421 1043626 - 1043640 + g 74 -4.2 -4.9138 | ATCACGTGCGCATGA GCGC GTAAATA GCGC TTTTGTTTCCCTCGT LVIS_1031 1044819 - 1043677 - | GTP-binding protein YqeH LVIS_1032 1045342 - 1044800 - | HAD superfamily hydrolase LVIS_1033 1046005 - 1045646 - | ribosomal protein L20 TERM 1422 1045850 - 1045871 + g 72 -10.1 -3.02461 | opp_overlap 1045868 GAAGTTACGCTTAGT CGCTTTCCG GTCA CGGAATGCG TATTGACGCCCCTTC LVIS_1034 1046270 - 1046076 - | ribosomal protein L35 LVIS_1035 1046787 - 1046320 - | translation initiation factor 3 TERM 1423 1046930 - 1046894 - R 100 -15.4 -5.28176 | gap 1 CTCACTCACAAAAAA TGCGGGAACC-TTTGAT CAGA ATCAAACGGCTCCCGCA AGAAATGTCATCACG LVIS_1036 1049027 - 1047084 - | threonyl-tRNA synthetase TERM 1424 1049101 - 1049071 - R 100 -16.2 -5.36364 | CGAAAAACACAAAAA GTCCCCAGCACCTC TAA AAGGCACTGGGGAC GTCAATAACGTGGTT LVIS_1037 1050288 - 1049362 - | primosomal protein DnaI LVIS_1038 1051662 - 1050292 - | replication initiation/membrane attachment protein TERM 1425 1051548 - 1051518 - G 88 -7.4 -5.08824 | TGGGTAGCCAAAAAA GGGCCGAGTAGAGC CCC GCGGCACTCGGTCC GATGATCGGCTGATA LVIS_1039 1052166 - 1051666 - | transcriptional regulator NrdR TERM 1426 1052085 - 1052047 - G 74 -9.7 -3.55622 | gap 1, opp_overlap 1052084 TTCAACTCGCTCAAA CGTCGTGAAC-CGAAAGC CGCA GCTCTCACACTCACGACG ACGGCGAATAACACG LVIS_1040 1052795 - 1052166 - | dephospho-CoA kinase LVIS_1041 1053648 - 1052788 - | formamidopyrimidine-DNA glycosylase LVIS_1042 1056331 - 1053671 - | DNA polymerase I TERM 1427 1054863 - 1054853 - G 71 -6.8 -4.1891 | TCGTGCCAACACAAA TGCC ATT GGCA ACTCAATATCACGGT LVIS_1043 1056646 - 1057992 + | cytosine deaminase-like protein LVIS_1044 1057992 - 1059341 + | xanthine/uracil permease TERM 1428 1059419 - 1059370 - T 81 -10.8 -3.25015 | opp_overlap 1059378, overlap 1059372 1059375 1059378 TTTAACGATTATCAA TATAATGAGGTGGTTCGGTAGC AAGTCA GCTGCCGAACCACCTTTTAATA ACGCACTCTATTTTT TERM 1429 1059416 - 1059372 - T 79 -10.9 -3.18737 | gap 1, opp_overlap 1059378, overlap 1059370 1059375 1059378 TAACGATTATCAATA TAATGAGGTGGTTCGGTAGC AAGTCA GCTGCCGAACCACCTT-TTA ATAACGCACTCTATT TERM 1430 1059414 - 1059375 - T 84 -10.7 -3.72742 | opp_overlap 1059378, overlap 1059372 1059370 1059378 CGATTATCAATATAA TGAGGTGGTTCGGTAGC AAGTCA GCTGCCGAACCACCTTT TAATAACGCACTCTA TERM 1431 1059378 - 1059411 + T 100 -19 -4.25283 | opp_overlap 1059375 1059372 1059370 1059378 TTATCAATATAATGA GGTGGTTCGGTAGC AAGTCA GCTGCCGAACCACC TTTTAATAACGCACT TERM 1432 1059411 - 1059378 - T 100 -16.8 -2.95751 | opp_overlap 1059378, overlap 1059375 1059372 1059370 TTATCAATATAATGA GGTGGTTCGGTAGC AAGTCA GCTGCCGAACCACC TTTTAATAACGCACT TERM 1433 1059446 - 1059476 + T 100 -14.8 -3.23637 | opp_overlap 1059446, overlap 1059441 TTTTCAAAAGAAAAA GCTCTGTCGAGCCA TTG TGGCTTAACAGAGC TTAACTTAATCTATT TERM 1434 1059476 - 1059446 - T 100 -14.8 -5.45802 | opp_overlap 1059441 1059446 TTTTCAAAAGAAAAA GCTCTGTCGAGCCA TTG TGGCTTAACAGAGC TTAACTTAATCTATT LVIS_1045 1060205 - 1059501 - | integral membrane protein, interacts with FtsH LVIS_1046 1061082 - 1060354 - | nicotinamide mononucleotide transporter murC 1062592 - 1061261 - | UDP-N-acetylmuramate--L-alanine ligase TERM 1435 1062332 - 1062346 + g 83 -4.2 -5.42514 | opp_overlap 1062325, overlap 1062325 ACGATAAACCGGCAA GCCC ATTTCCC GGGC TTTTTTGATTTCTGG LVIS_1048 1065353 - 1062726 - | DNA segregation ATPase FtsK/SpoIIIE related protein TERM 1436 1065520 - 1065546 + r 100 -11.6 -4.11081 | gap 1, opp_overlap 1065520, overlap 1065511 ATTGTACACAAAAAA GCGGGTC-GCC GACAAG GGCTGACCCGC TTTGTAATATTCTTT TERM 1437 1065546 - 1065520 - R 100 -11.6 -5.37043 | gap 1, opp_overlap 1065511 1065520 ATTGTACACAAAAAA GCGGGTC-GCC GACAAG GGCTGACCCGC TTTGTAATATTCTTT LVIS_1049 1066201 - 1065563 - | EMAP domain-containing protein TERM 1438 1066165 - 1066181 + g 85 -12.3 -3.36175 | opp_overlap 1066164 1066160 CCACAATTAATGTAT CCCCCAA CTC TTGGGGG TTGTAACTAGCAATT LVIS_1050 1066557 - 1066225 - | Thiol-disulfide isomerase and thioredoxin LVIS_1051 1066736 - 1067062 + | hypothetical protein TERM 1439 1067076 - 1067102 + T 100 -10.2 -5.40072 | AATTTAACTGACCTT GACGACACCATT TTA AGTAGTGTCGTC TTTTTTTGCCAAAAA TERM 1440 1067151 - 1067119 - T 100 -19.3 -5.00616 | opp_overlap 1067119 TTTTTTGCCAAAAAA CTGACAGTGGTCGCA TCA TCCGACCACTGTCAG TTTTTGATTATTTCG TERM 1441 1067119 - 1067151 + T 100 -19.3 -5.04356 | opp_overlap 1067119 TTTTTTGCCAAAAAA CTGACAGTGGTCGCA TCA TCCGACCACTGTCAG TTTTTGATTATTTCG LVIS_1052 1068526 - 1067168 - | gamma-aminobutyrate permease related permease TERM 1442 1067749 - 1067737 - G 78 -9.1 -4.07568 | opp_overlap 1067724 TTTGGTTTGGCAAAA CCGTG TTC CACGG ATAAATCGCCATAAT LVIS_1053 1069670 - 1068561 - | alanine dehydrogenase TERM 1443 1069869 - 1069845 - R 100 -8.6 -5.62219 | gap 1, opp_overlap 1069847 AAGACAGCAAAAAAA GAGCTCG-GGC AACC GCCACGAACTC CCTTGATAACCTTTA LVIS_1054 1070388 - 1069882 - | UspA family nucleotide-binding protein LVIS_1055 1071826 - 1070426 - | dipeptidase PepV TERM 1444 1072580 - 1072570 - g 71 -6.8 -4.2679 | CAACGCTTATGAAAA TCCC CTA GGGA CTCCGGCGCAAGCAA LVIS_1056 1071968 - 1072801 + | sugar kinase TERM 1445 1072800 - 1072845 + T 100 -9.8 -5.27023 | opp_overlap 1072805, overlap 1072804 1072805 1072807 AGCATAAAGACGTTT AAAAACAGGCAACTTACCGC ATTGAA GTGGTAAGTTGCCTGCTTAA TTTTATTTTTCAAGT TERM 1446 1072804 - 1072841 + T 100 -15 -3.96867 | opp_overlap 1072805, overlap 1072800 1072805 1072807 TAAAGACGTTTAAAA ACAGGCAACTTACCGC ATTGAA GTGGTAAGTTGCCTGC TTAATTTTATTTTTC TERM 1447 1072805 - 1072840 + T 100 -18.5 -2.9568 | opp_overlap 1072805, overlap 1072804 1072800 1072807 AAAGACGTTTAAAAA CAGGCAACTTACCGC ATTGAA GTGGTAAGTTGCCTG CTTAATTTTATTTTT TERM 1448 1072840 - 1072805 - T 100 -16.3 -4.62904 | opp_overlap 1072805 1072804 1072800 1072807 AAAGACGTTTAAAAA CAGGCAACTTACCGC ATTGAA GTGGTAAGTTGCCTG CTTAATTTTATTTTT TERM 1449 1072807 - 1072838 + T 100 -15.3 -2.99031 | opp_overlap 1072805, overlap 1072805 1072804 1072800 AGACGTTTAAAAACA GGCAACTTACCGC ATTGAA GTGGTAAGTTGCC TGCTTAATTTTATTT LVIS_1057 1073537 - 1072848 - | 16S rRNA uridine-516 pseudouridylate synthase related pseudouridylate synthase LVIS_1058 1075183 - 1073549 - | polysaccharide transporter TERM 1450 1073961 - 1073935 - G 75 -10.3 -3.41126 | gap 1, opp_overlap 1073933 CGATAAATTTCACAA CCGTTC-CTACT AAGA AGTAGCGAACGG CGCGTTTATTTTGTG LVIS_1059 1075405 - 1075725 + | hypothetical protein TERM 1451 1075729 - 1075762 + F 100 -11.8 -4.35885 | overlap 1075732 AACCTGCTTTAACCT GAACTCCCAATCGC CAATCA GCGGTTGGGAGTTA TTTATTCTCATCGAT TERM 1452 1075732 - 1075759 + F 100 -13.5 -4.29119 | overlap 1075729 CTGCTTTAACCTGAA CTCCCAATCGC CAATCA GCGGTTGGGAG TTATTTATTCTCATC TERM 1453 1075882 - 1075869 - g 83 -2.3 -5.53991 | GAGTCACGAAAAAAA CGGCA TCAC TGCTG GCTACTTACAAGCCG LVIS_1060 1075831 - 1076595 + | flavoprotein TERM 1454 1076607 - 1076655 + T 100 -9.8 -5.50499 | gap 1, overlap 1076611 TTAAGATTAACTGCT TAACCCCCTGTTTTTATCAGATC GATT GGTCTGATA-AGACAAGGGGTTC TTTTTTTACATATCG TERM 1455 1076611 - 1076652 + T 100 -11.7 -4.8236 | overlap 1076607 GATTAACTGCTTAAC CCCCTGTTTTTATCAGATC GATT GGTCTGATAAGACAAGGGG TTCTTTTTTTACATA LVIS_1061 1077335 - 1076661 - | ABC-type cobalt transport system, ATPase component TERM 1456 1077756 - 1077717 - R 100 -22.4 -5.00616 | opp_overlap 1077709 1077719 1077721 GTTCTGTTCAAAAAA CAGAGTGCCTCATCAGGA TTCG CCCTGATAAGGCACTCTG TTCGACGCTTGTATC TERM 1457 1077719 - 1077754 + r 100 -16.3 -3.04799 | opp_overlap 1077717, overlap 1077709 1077721 TCTGTTCAAAAAACA GAGTGCCTCATCAGG ATTCGC CCTGATAAGGCACTC TGTTCGACGCTTGTA TERM 1458 1077721 - 1077752 + r 95 -13.1 -3.0782 | opp_overlap 1077717, overlap 1077719 1077709 TGTTCAAAAAACAGA GTGCCTCATCAGG ATTCGC CCTGATAAGGCAC TCTGTTCGACGCTTG leuS 1080213 - 1077784 - | leucyl-tRNA synthetase TERM 1459 1080257 - 1080291 + H 80 -11.5 -2.61144 | gap 1, opp_overlap 1080257, overlap 1080256 1080254 1080267 CGTGCCACAAAAAAA GCCC-CCAGAGGTCCA AAAA TGGACTTCTGTAGGGC GTCTTTGCGCGGTAC TERM 1460 1080291 - 1080257 - H 100 -11.5 -5.60993 | gap 1, opp_overlap 1080257 1080256 1080254 1080267 CGTGCCACAAAAAAA GCCCC-CAGAGGTCCA AAAA TGGACTTCTGTAGGGC GTCTTTGCGCGGTAC LVIS_1063 1080655 - 1081296 + | membrane-associated phospholipid phosphatase TERM 1461 1081577 - 1081567 - g 73 -8.2 -3.92075 | overlap 1081568 ACCTGGACCCAGAAA CGCC AGT GGCG GCGGCAATTTTTAAT LVIS_1064 1081293 - 1081859 + | SAM-dependent methyltransferase TERM 1462 1081955 - 1081986 + G 87 -11 -4.13767 | gap 1, opp_overlap 1081954 1081955 CTATCTGCAAACAAC CTCGTCACCATCCAT GTT GTGGGTGGTGAC-AG TTTTACCATCGAAAG LVIS_1065 1081916 - 1082110 + | hypothetical protein TERM 1463 1082120 - 1082141 + T 100 -13 -5.38951 | opp_overlap 1082113 1082124 CAATAAATCGGGCAA GGCACGGG CACTGA CCCGTGCC TTTTTTCTATCGATT LVIS_1066 1083511 - 1082189 - | glycosyltransferase TERM 1464 1083270 - 1083251 - G 79 -10.8 -3.54543 | ATTGAGTTCCTCAAA CAGATACG TAAT CGTATCTG CCAACATGACTTCCT LVIS_1067 1084029 - 1083520 - | hypothetical protein TERM 1465 1084955 - 1084982 + H 89 -10.6 -3.92075 | opp_overlap 1084955 ATTGACACTAAAAAA CGCTAAGTTTCC ATTA GGGATCTTAGCG TTTATACATCGCCAT TERM 1466 1084982 - 1084955 - H 100 -8.4 -5.22312 | opp_overlap 1084955 ATTGACACTAAAAAA CGCTAAGTTTCC ATTA GGGATCTTAGCG TTTATACATCGCCAT TERM 1467 1085152 - 1085172 + H 100 -9 -4.67038 | opp_overlap 1085152 1085151 ACTTATAGCACAAAG GCGGTCAT TATCT ATGGCCGC TTTTACTTTTACAAA TERM 1468 1085606 - 1085631 + H 84 -5.5 -5.32699 | gap 1, opp_overlap 1085603 1085597 1085606, overlap 1085597 CAATACCTAAAATAA GGACAAC-CC TTGATGT GGTGTTGTCC TTTTTTAGTCTTTCA LVIS_1069 1085689 - 1086048 + | hypothetical protein TERM 1469 1086060 - 1086079 + T 74 -5 -4.83169 | TTAGTGTTCTGAGAT GGTGTATT CAGA ACTACACC TTTTTATGGCAAACT TERM 1470 1086087 - 1086128 + T 100 -9.5 -5.27335 | opp_overlap 1086100 ACTACACCTTTTTAT GGCAAACTGTAAACACCAC GCAT GTGATGTTAATAGTTCGCC TTTTTATTTGAAAAA LVIS_1070 1087436 - 1086294 - | Zn peptidase LVIS_1071 1088122 - 1087442 - | hypothetical protein TERM 1471 1087498 - 1087515 + g 80 -8.5 -4.38774 | CTGCGCTGAATGATG CTACTTC TCTT GAAGTAG TTTTAATATCCTGTT TERM 1472 1088198 - 1088227 + r 83 -9.1 -4.2349 | opp_overlap 1088199, overlap 1088199 CTTGCGTACCAAAAA AGGCGCCCACCCC GTTA GGAGTGAGCGCCC TTTTAAATCTGAAAC TERM 1473 1088226 - 1088199 - R 100 -17 -5.14563 | opp_overlap 1088198 1088199 TTGCGTACCAAAAAA GGCGCCCACCCC GTTA GGAGTGAGCGCC CTTTTAAATCTGAAA TERM 1474 1088199 - 1088226 + r 93 -12.6 -3.13773 | opp_overlap 1088199, overlap 1088198 TTGCGTACCAAAAAA GGCGCCCACCCC GTTA GGAGTGAGCGCC CTTTTAAATCTGAAA LVIS_1072 1089321 - 1088269 - | Lyzozyme M1 (1,4-beta-N-acetylmuramidase) LVIS_1073 1089839 - 1089321 - | hypothetical protein LVIS_1074 1090134 - 1089832 - | hypothetical protein LVIS_1075 1090517 - 1090131 - | hypothetical protein TERM 1475 1090606 - 1090559 - R 81 -5.1 -5.16237 | gap 3, overlap 1090573 AATCCCATCAAAAAA GCACCAA-TCATCAATCCTAAGCC ACA GGCGTAGAA--GATGAATCGGTGC TGGTAGAGTTTTTTG LVIS_1076 1090745 - 1090575 - | hypothetical protein LVIS_1077 1090891 - 1090760 - | hypothetical protein LVIS_1078 1091356 - 1090904 - | hypothetical protein TERM 1476 1091032 - 1091058 + g 73 -2.3 -5.14698 | CCATCAAGCCTTGCT GCGTTAACTCA TTGGC TGACTTAAGGC TTTTATTTTCAGTTT LVIS_1079 1091956 - 1091375 - | hypothetical protein LVIS_1080 1093754 - 1091958 - | hypothetical protein TERM 1477 1092144 - 1092125 - G 73 -8.6 -3.88787 | opp_overlap 1092140, overlap 1092128 CGACAGGTTCAGAAA CAACCCCA GTGT TAGGGTTG CGGGCAATCGTATTA LVIS_1081 1094364 - 1093756 - | hypothetical protein LVIS_1082 1095517 - 1094354 - | Phage Mu gp47 related protein TERM 1478 1094698 - 1094672 - G 93 -8.8 -5.14563 | gap 1, opp_overlap 1094672 CGCTGTATCAAAAAA GACATCGTGCG TATGAC CGC-CGATGTC TTTTACTGCTTCTTT TERM 1479 1094672 - 1094698 + g 80 -8.8 -4.40037 | gap 1, opp_overlap 1094672 CGCTGTATCAAAAAA GACATCGTGCG TATGAC CGC-CGATGTC TTTTACTGCTTCTTT LVIS_1083 1095888 - 1095514 - | hypothetical protein LVIS_1084 1096259 - 1095885 - | hypothetical protein LVIS_1085 1097215 - 1096256 - | hypothetical protein LVIS_1086 1097594 - 1097208 - | hypothetical protein LVIS_1087 1098909 - 1097608 - | muramidase (flagellum-specific) LVIS_1088 1104608 - 1098921 - | SLT domain-containing protein TERM 1480 1101810 - 1101840 + g 73 -8.2 -3.94933 | overlap 1101839 AGCCTTGGCAGAACT GAGCGTCTTGTAGT AAG ACTTCGTGGCGCTC TCTTTTTGAGATTCA LVIS_1089 1104739 - 1104626 - | hypothetical protein TERM 1481 1104793 - 1104815 + r 84 -9.9 -3.86106 | opp_overlap 1104792 1104791, overlap 1104800 AAGGACGGTAAAATT GCAGAAGGT ACTGA GCCTTCTGC TTTAGTACTTGCTCT LVIS_1090 1105472 - 1104846 - | hypothetical protein TERM 1482 1105576 - 1105557 - R 90 -4.2 -5.64006 | opp_overlap 1105559, overlap 1105559 ATTTAAGCAAAAAAA TAGACTGC ACCG GCAGCCTT ACTCAAATTCTATTT TERM 1483 1105574 - 1105559 - R 76 -6.8 -4.45473 | opp_overlap 1105559, overlap 1105557 TTAAGCAAAAAAATA GACTGC ACCG GCAGCC TTACTCAAATTCTAT LVIS_1091 1106085 - 1105603 - | hypothetical protein LVIS_1092 1107254 - 1106103 - | hypothetical protein LVIS_1093 1107760 - 1107272 - | hypothetical protein LVIS_1094 1108127 - 1107744 - | hypothetical protein LVIS_1095 1108445 - 1108146 - | hypothetical protein LVIS_1096 1108972 - 1108460 - | hypothetical protein LVIS_1097 1109319 - 1108969 - | hypothetical protein TERM 1484 1109096 - 1109080 - G 75 -3.6 -5.08169 | AGACACGTCAAAAAA GCTCTC AGTTA GAGGGC CCATAGTCTGACTAC LVIS_1098 1110613 - 1109492 - | hypothetical protein TERM 1485 1110263 - 1110283 + g 85 -7.7 -4.69622 | opp_overlap 1110265 CATAGAGTCTTGGAA GATATGGTT ATT AATCATATC TTTTTCAGCTTGTGT LVIS_1099 1111032 - 1110631 - | hypothetical protein TERM 1486 1110844 - 1110856 + g 78 -7.7 -4.33274 | AGCGTCAGTTGCGAC CGCAA GAA TTGCG TTTTCGTCGTCTAAC LVIS_1100 1111697 - 1111044 - | hypothetical protein TERM 1487 1111829 - 1111796 - R 71 -2.3 -5.24129 | opp_overlap 1111796 1111797, overlap 1111797 TTTGGGTACAAAAAA GGTCGATTCAACGGT AAAT ACCGAACAATCGACT CTTTGAAATTATTTA LVIS_1101 1112826 - 1111891 - | Phage Mu protein F like protein TERM 1488 1112077 - 1112101 + gr 73 -8.5 -3.72695 | overlap 1112080 TATACCCTTCATCCG GTACGTGGTCA TGT TGACCTCGTCC TTTAATCGGGCCGAT LVIS_1102 1114270 - 1112747 - | Phage portal protein, SPP1 Gp6-like LVIS_1103 1115544 - 1114282 - | Phage terminase large subunit TERM 1489 1115177 - 1115137 - G 75 -3.4 -5.15634 | gap 2, opp_overlap 1115157 TACTTCATCAAAAAA GAAGCCAGCGACCGTAATGC CTT GCACCA-GGTCT-TGACTTC CTTCATCTTTGCCCC LVIS_1104 1115744 - 1116331 + | integrase TERM 1490 1116326 - 1116343 + T 100 -7.7 -5.34381 | GATAATATAGACTTC GGGTAGC TTCG GCTACTC TTTTTCTTTGCCTTT LVIS_1105 1117096 - 1116338 - | hypothetical protein LVIS_1106 1117310 - 1117128 - | hypothetical protein LVIS_1107 1117575 - 1117330 - | hypothetical protein LVIS_1108 1117913 - 1117587 - | hypothetical protein TERM 1491 1117954 - 1117935 - R 100 -11.4 -5.27335 | TCCTCCAAACAAAAA GCCATCCC CAAA GGGACGGC CATAATGAACACCGT LVIS_1112 1119154 - 1119083 - | hypothetical protein LVIS_1113 1119795 - 1119340 - | hypothetical protein TERM 1492 1119859 - 1119877 + r 100 -11 -5.24989 | GAGTTATTTTGGTGA GGGCTGCT GTT AGCAGCTC TTTTTTGCTGTCTAA LVIS_1114 1120212 - 1119889 - | hypothetical protein LVIS_1115 1120499 - 1120242 - | hypothetical protein LVIS_1116 1120939 - 1120640 - | hypothetical protein LVIS_1117 1121317 - 1120973 - | hypothetical protein LVIS_1118 1121696 - 1121442 - | hypothetical protein LVIS_1119 1121954 - 1121697 - | hypothetical protein LVIS_1120 1122166 - 1121969 - | hypothetical protein LVIS_1121 1122641 - 1122180 - | hypothetical protein LVIS_1122 1122883 - 1122638 - | hypothetical protein LVIS_1123 1123249 - 1123052 - | hypothetical protein LVIS_1124 1123476 - 1123261 - | hypothetical protein LVIS_1125 1123888 - 1123469 - | hypothetical protein LVIS_1126 1124601 - 1123900 - | hypothetical protein LVIS_1127 1125015 - 1124602 - | hypothetical protein LVIS_1128 1126252 - 1125008 - | replicative DNA helicase LVIS_1129 1127005 - 1126253 - | hypothetical protein TERM 1493 1126684 - 1126703 + g 100 -9.4 -5.86061 | TATCTCTAAAGTTTT TTTGGGTA GGGG TACCCAAA TTTTTTTTAGTAGGG LVIS_1130 1127203 - 1127006 - | hypothetical protein LVIS_1131 1127857 - 1127273 - | hypothetical protein LVIS_1132 1128552 - 1127854 - | hypothetical protein LVIS_1133 1129446 - 1128553 - | hypothetical protein LVIS_1134 1129618 - 1129439 - | hypothetical protein TERM 1494 1129704 - 1129731 + r 81 -5.5 -5.18357 | GGGATTTGTCTGTTG GCTCGCTAGCG CTGCCC TGCTAACGGGC TTTTTTCGTGCATTC LVIS_1135 1129896 - 1129774 - | hypothetical protein LVIS_1136 1130223 - 1129945 - | hypothetical protein LVIS_1137 1130566 - 1130312 - | hypothetical protein LVIS_1138 1130776 - 1130579 - | hypothetical protein LVIS_1139 1131571 - 1130789 - | Phage anti-repressor protein TERM 1495 1131367 - 1131389 + g 74 -9.1 -3.6279 | opp_overlap 1131371 1131372, overlap 1131372 CAGCATGTTCGTTAA CCAATCCCG TTTTT CGGGTTTGG TTCTTGAAGGCCTTT LVIS_1140 1131802 - 1131584 - | hypothetical protein TERM 1496 1132169 - 1132150 - g 70 -2.2 -4.90266 | overlap 1132168 TGGACTAAGCAAAAA TGTTATTT ACCA ATATAACA AGGGAAAGAGTCCTT LVIS_1141 1132061 - 1132477 + | XRE family transcriptional regulator TERM 1497 1133122 - 1133112 - g 82 -5.4 -5.12617 | CAAGTATCTAAAAAA GTTG CTA CAAC TAAAATAGATTTACT LVIS_1143 1133019 - 1133903 + | hypothetical protein TERM 1498 1134193 - 1134169 - g 71 -10.1 -2.78384 | TCCGGCTTCATCAGA TGACTCTTCAT CCG ATGATGAGTCA TCAGACACTAACAGC LVIS_1144 1133963 - 1134712 + | hypothetical protein TERM 1499 1134758 - 1134726 - f 95 -5.6 -5.61913 | gap 1 AAGAAATACAAAAAA GCGCATCC-CCTCCC GCCA AGAAGATAGATGCGC TAATAAAAAGGAGAT LVIS_1145 1134782 - 1135543 + | hypothetical protein LVIS_1146 1135879 - 1137333 + | integrase TERM 1500 1137436 - 1137402 - T 100 -16.6 -5.95946 | opp_overlap 1137430, overlap 1137425 CGAACAACAAAAAAA TCGCTGAACCCCTTCT CTA ACAAGGGATTCAGCGA CTGAGTCACAACTTT TERM 1501 1137441 - 1137475 + T 100 -15.3 -4.46576 | opp_overlap 1137425 1137448, overlap 1137430 GGATTCAGCGACTGA GTCACAACTTTTGGT AAAAA ATCAAAAGTTGTGAC TTTCTTGTGCTTTTT LVIS_1147 1138295 - 1137570 - | adaptor protein TERM 1502 1138422 - 1138389 - R 77 -3.9 -5.23316 | gap 1 CATCATACCAAAAAA CCGGA-CTGCAAGTAA CAT TTTCTCACAAATCCGG TCAGATGCAACTAAT LVIS_1148 1138850 - 1138443 - | arsenate reductase TERM 1503 1138499 - 1138519 + g 76 -8.2 -3.97209 | CCAATGCTCGAACCT TCCGCGGC AAGAA GCGGCGGA TTTCCTCTTCGTTAA LVIS_1149 1139794 - 1139054 - | beta-lactamase superfamily hydrolase LVIS_1150 1139918 - 1140421 + | monooxygenase TERM 1504 1140427 - 1140453 + F 100 -10.9 -5.40279 | TCAAGGCTAACCCTA CAGGCCCAATC ATCTG GATTGGACCTG TTTTATTTTGTTTTC LVIS_1151 1140528 - 1141730 + | hypothetical protein TERM 1505 1141735 - 1141766 + T 100 -10.3 -4.57073 | opp_overlap 1141735 AGCGACACTAAAAAA GGAACTGGTTTCG ATGGCC TGAAATCAGTTCC TTTTTGGCAACAATA TERM 1506 1141766 - 1141735 - T 90 -7.4 -5.22312 | gap 1, opp_overlap 1141735 AGCGACACTAAAAAA GGAACTGGTTTC-GA TGG CCTGAAATCAGTTCC TTTTTGGCAACAATA TERM 1507 1141819 - 1141802 - T 100 -7.7 -5.68438 | opp_overlap 1141802 TTATCAAACAAAAAA GCCTTCC CAAA GGAAGAC TTACTAAGACGGTCC TERM 1508 1142764 - 1142733 - T 79 -3.1 -5.35224 | gap 1 TCCATAAAAATAAAA TACAAGTGCCCTTT TGAAT AATGGAC-CTTGTA GGACTCGAACCTACG TERM 1509 1144117 - 1144133 + T 70 -5.1 -4.4715 | opp_overlap 1144114, overlap 1144098 GGGGGAGATAAGCCT GTTATCC CCA GGGTAGC TTTTATCCGTTGAGC TERM 1510 1146757 - 1146732 - T 79 -8.3 -4.08557 | GTTTTCAAAGAACAA GTTTAGAGAGG TAAG CCCCTCAAAAC TGAACATTGTTTCAA TERM 1511 1148150 - 1148169 + T 70 -7.2 -3.81848 | opp_overlap 1148150 AAGCCACCTTTCAAA CAAGATCC ATGC GGATTTTG TTGTTATACGGTATT TERM 1512 1148378 - 1148359 - T 70 -7.2 -3.79747 | overlap 1148360 TGAGCCAGGATCAAA CTCTCATC TTAT GATGAGAA CTTAAGTAAGCTCAT TERM 1513 1148845 - 1148816 - T 100 -3.6 -6.20267 | gap 1, opp_overlap 1148820 1148820, overlap 1148820 1148822 GGAAAAATAAAAAAA TAAAGG-CCCCTC TTTAG GAGGAGACCTTTT CTTGATCTAAACGTC TERM 1514 1148840 - 1148820 - T 82 -4.6 -5.36181 | opp_overlap 1148820 1148820, overlap 1148816 1148822 AAATAAAAAAATAAA GGCCCCTC TTTAG GAGGAGAC CTTTTCTTGATCTAA LVIS_1173 1149218 - 1148829 - | RNA-binding protein TERM 1515 1149151 - 1149122 - G 77 -10.1 -3.45839 | gap 1 ATTCTGAAATATGAA TCAGTCCCTGGCGA TGA CCGCCAAG-ACTGA CAAAGGCCCCATAAG TERM 1516 1149230 - 1149244 + r 71 -4.2 -4.90869 | CCATGCTACCGTCCT CCTTCT TAT AGTAGG TTTTTGATTAGTCAT LVIS_1174 1149845 - 1149252 - | peptidyl-prolyl cis-trans isomerase TERM 1517 1149914 - 1149926 + H 71 -9.1 -3.28219 | opp_overlap 1149911 1149910 1149914, overlap 1149912 TCAACAAAAATGCAA CCGAC GCG GTCGG TGTTATACTGAAATT TERM 1518 1149926 - 1149914 - H 73 -9.1 -3.52358 | opp_overlap 1149914 1149912, overlap 1149911 1149910 TCAACAAAAATGCAA CCGAC GCG GTCGG TGTTATACTGAAATT LVIS_1175 1149967 - 1150476 + | phosphatidylglycerophosphatase A related protein LVIS_1176 1150576 - 1151241 + | hypothetical protein TERM 1519 1151249 - 1151267 + F 100 -8.9 -5.63517 | overlap 1151257 ACGATTAAAATCGTG CCAAGTC TTAGT GACTTGG TTTTTTGTTTACAAA LVIS_1178 1151614 - 1152408 + | Short-chain alcohol dehydrogenase TERM 1520 1152543 - 1152568 + T 100 -9.8 -5.68039 | CGCACCTCACCATTG CAGCATAACG GTCAAA CGTTGTGCTG TTTTTTTGTGAATTT TERM 1521 1152595 - 1152641 + T 100 -16.2 -3.77489 | gap 1, opp_overlap 1152596 1152601, overlap 1152596 1152601 ATTTTTTTCTACATA ATAAAACTAGGAGTG-CCCCT CGTCAT AGGGGTCACTCCTAGTTTTAA TTTGACTATTCAGTT TERM 1522 1152596 - 1152640 + T 100 -19.7 -2.8577 | gap 1, opp_overlap 1152596 1152601, overlap 1152595 1152601 TTTTTTTCTACATAA TAAAACTAGGAGTG-CCCCT CGTCAT AGGGGTCACTCCTAGTTTTA ATTTGACTATTCAGT TERM 1523 1152640 - 1152596 - T 100 -19.7 -3.48276 | gap 1, opp_overlap 1152595 1152596 1152601, overlap 1152601 TTTTTTTCTACATAA TAAAACTAGGAGTG-CCCCT CGTCAT AGGGGTCACTCCTAGTTTTA ATTTGACTATTCAGT TERM 1524 1152635 - 1152601 - T 100 -15.2 -4.84311 | gap 1, opp_overlap 1152601 1152596 1152595, overlap 1152596 TTCTACATAATAAAA CTAGGAGTG-CCCCT CGTCAT AGGGGTCACTCCTAG TTTTAATTTGACTAT TERM 1525 1152601 - 1152635 + T 100 -15.2 -4.57516 | gap 1, opp_overlap 1152596 1152601, overlap 1152596 1152595 TTCTACATAATAAAA CTAGGAGTG-CCCCT CGTCAT AGGGGTCACTCCTAG TTTTAATTTGACTAT LVIS_1179 1154053 - 1152647 - | amino acid transporter TERM 1526 1153891 - 1153871 - G 73 -4.5 -4.72272 | TGCGGCGAGTAAAAA GGCCACGGC CAC GGCGGGACC AGCGTGCAAGGCCGC TERM 1527 1154231 - 1154205 - R 100 -12.3 -5.77853 | opp_overlap 1154205 AATTCTCAAAAAAAA TGACGCGCCCC ATTAA AGGACGCGTCA TTTCCTTTATGCAAT TERM 1528 1154205 - 1154231 + r 85 -9.4 -4.14397 | opp_overlap 1154205 AATTCTCAAAAAAAA TGACGCGCCC CATTAAA GGACGCGTCA TTTCCTTTATGCAAT LVIS_1180 1156105 - 1154246 - | outer membrane protein TERM 1529 1156066 - 1156056 - G 81 -3.2 -5.4505 | CCTGCTAACAAAAAA GTCA ACG CGAC AAGCAAGCTCCACAG TERM 1530 1156215 - 1156243 + r 75 -9 -3.67864 | TTCGAATGGTTAATT TTAGCTAGTTCG TGCCC CAAACTAGCTAA TTTCACGTTAAGTTC TERM 1531 1156383 - 1156353 - R 100 -12.1 -5.10767 | opp_overlap 1156352 1156353 1156355 GATTCAAGACAAAAA GATGAAACCTAGT AGCCA ACTAGATTTCATC CTTCATTGTGGTGCT TERM 1532 1156353 - 1156383 + r 71 -9.9 -2.6834 | opp_overlap 1156353, overlap 1156352 1156355 GATTCAAGACAAAAA GATGAAACCTAGT AGCCA ACTAGATTTCATC CTTCATTGTGGTGCT LVIS_1181 1158628 - 1156439 - | hypothetical protein TERM 1533 1156554 - 1156568 + g 83 -7.2 -4.69464 | CAATCATCGGTAACG CCATAA ACA TTATGG TTTTTCGCCTGTTTT TERM 1534 1158207 - 1158217 + g 93 -6.8 -5.5074 | CCTAAAGTTTCTCCT GGGA CAC TCCC TTTTTTATTCAATTC TERM 1535 1158839 - 1158800 - R 78 -7.1 -4.41114 | gap 1 TCATCACATAACAAA GGGTCTGTAGCGTTTGCG ACAAG CGCAAAC-CGGCAGGCCC AACGAGTCATTCTTC LVIS_1182 1159551 - 1158910 - | cell surface protein TERM 1536 1160121 - 1160100 - R 100 -11.7 -6.34616 | CCAAAACAAAAAAAA CGTCATTCA TTAA TGAATGACG TGCCGTTAAATACTT LVIS_1183 1160779 - 1160150 - | hypothetical protein LVIS_1184 1161566 - 1160772 - | HAD family sugar phosphatase TERM 1537 1160804 - 1160838 + g 71 -6.4 -4.25283 | CCTCGAAATCCCATC GATCCAGCGCACTTAC GGT GTAGGTCGGCTGAATC TTTTGCTGGGCAACT LVIS_1185 1162223 - 1161579 - | hypothetical protein TERM 1538 1161785 - 1161799 + g 90 -7.8 -5.12707 | overlap 1161767 1161796 TAACTGCTGGTTGTG CAGCCG TTG CGGTTG TTTTTTCAACTTTAG LVIS_1186 1163626 - 1162244 - | 5'-nucleotidase/2',3'-cyclic phosphodiesterase related esterase LVIS_1187 1164297 - 1163689 - | phosphoesterase or phosphohydrolase LVIS_1188 1165160 - 1164312 - | aldo/keto reductase TERM 1539 1165238 - 1165286 + r 100 -13.4 -3.786 | opp_overlap 1165242 1165249 GTTCCAATCCCTTAT CTAATCAAAAACAGGATCGG GTATGCTCA CCGATCCTGTCCTTGATTAG TTTGAAGTTTTATCA TERM 1540 1165282 - 1165242 - R 95 -12.8 -3.06133 | opp_overlap 1165238, overlap 1165249 CAATCCCTTATCTAA TCAAAAACAGGATCGG GTATGCTCA CCGATCCTGTCCTTGA TTAGTTTGAAGTTTT TERM 1541 1165275 - 1165249 - R 100 -9.5 -4.88407 | opp_overlap 1165238, overlap 1165242 TTATCTAATCAAAAA CAGGATCGG GTATGCTCA CCGATCCTG TCCTTGATTAGTTTG LVIS_1189 1166686 - 1165283 - | gamma-aminobutyrate permease related permease TERM 1542 1165958 - 1165948 - G 77 -6.8 -4.64486 | opp_overlap 1165947 AGTAAAATAAAATAA TCCG CAT CGGA ATCTCATTAATCGCC TERM 1543 1166879 - 1166853 - R 100 -14.5 -5.44119 | TTTAGGTGAAAAAAA GACACGCTGGC TTTCT GCCAACGTGTC AGTCAATCGATCTTA LVIS_1190 1168082 - 1166892 - | acetate kinase TERM 1544 1168098 - 1168120 + r 78 -5.6 -4.89477 | overlap 1168099 1168100 GTAGTAACTTCTCCT TTTATTGACG ATC CGTCAGTAGG TTTTGTTCTTCCCAC LVIS_1191 1169121 - 1168099 - | adenine-specific DNA methylase LVIS_1192 1169369 - 1169217 - | hypothetical protein LVIS_1193 1169833 - 1169411 - | competence protein ComGF LVIS_1194 1170042 - 1169830 - | hypothetical protein LVIS_1195 1170463 - 1170014 - | hypothetical protein LVIS_1196 1170761 - 1170450 - | competence protein ComGC LVIS_1197 1171734 - 1170754 - | Type II secretory pathway/competence component TERM 1545 1171246 - 1171215 - G 79 -11.5 -3.25918 | overlap 1171213 1171211 GAACTCGTAAATACA GCGTTGCCAGCCG TAACCG CGGCTGGCGATGC CACCACTGCCAAGCT LVIS_1198 1172707 - 1171742 - | Type II secretory pathway/competence component, ATPase TERM 1546 1172783 - 1172798 + r 80 -4.6 -5.09204 | opp_overlap 1172783 TGCGTGAAAAAAAAA GAGACC CGCA GGCCTC TTTTTCTTCAAATCT TERM 1547 1172798 - 1172783 - R 100 -6.8 -6.06723 | opp_overlap 1172783 TGCGTGAAAAAAAAA GAGACC CGCA GGCCTC TTTTTCTTCAAATCT LVIS_1199 1173550 - 1172813 - | hypothetical protein TERM 1548 1173977 - 1173951 - g 81 -3.7 -5.43866 | CAAGCTTCAAAAAAA GGGGACGTT GGTCATGGG AACCTCCCC CGACTACCCACCTTA TERM 1549 1174611 - 1174573 - g 75 -7.7 -4.2123 | CATGCAGCCAACAAA TCTGTTGACCAGATT AAAACACAA AATCTAGTCAACAAA ACTTACTTGCCAGCG TERM 1550 1174635 - 1174613 - g 78 -6.2 -4.68384 | opp_overlap 1174615, overlap 1174614 1174615 1174617 ATCTAGTCAACAAAA CTTACTTGCC AGC GGCTGGTAAG TATTTAAAAACTAAT TERM 1551 1174615 - 1174637 + G 83 -11.4 -3.56092 | opp_overlap 1174613 1174614 1174615 1174617 CTAGTCAACAAAACT TACTTGCCAG CGG CTGGTAAGTA TTTAAAAACTAATAC LVIS_1200 1173829 - 1175307 + | ABC-type amino acid transport system, permease and periplasmic component LVIS_1201 1175300 - 1176040 + | ABC-type polar amino acid transport system, ATPase component TERM 1552 1176041 - 1176084 + T 86 -11.9 -3.0873 | opp_overlap 1176030 1176046, overlap 1176046 AAAATTTTAATTTAA AAAAAGCCACACAATTAGG AATTAA CCCGATTGTGTGGCTTTTC TATTCACATCATTTA TERM 1553 1176079 - 1176046 - T 100 -11.8 -5.53288 | opp_overlap 1176041 1176046 TTTAATTTAAAAAAA GCCACACAATTAGG AATTAA CCCGATTGTGTGGC TTTTCTATTCACATC TERM 1554 1176046 - 1176079 + T 100 -11.8 -4.67608 | opp_overlap 1176046, overlap 1176041 TTTAATTTAAAAAAA GCCACACAATTAGG AATTAA CCCGATTGTGTGGC TTTTCTATTCACATC LVIS_1202 1176924 - 1176097 - | hypothetical protein TERM 1555 1177066 - 1177047 - R 100 -15 -5.07652 | opp_overlap 1177042 TTTGCCAAAATAAAA GGCACCGG TCCC CCGGTGCC TAGATATCACTTCGT LVIS_1203 1178074 - 1177073 - | catabolite control protein A TERM 1556 1177873 - 1177887 + g 75 -5.6 -4.72497 | CGTCAGGGATGATTA CGCCCA CCG TGGTCG TTTTCTTGCTGGCTA TERM 1557 1178599 - 1178580 - g 73 -7.2 -4.18018 | gap 1, overlap 1178581 CGTGGCCATTGAAAA GGGTCAACT ACA AGTTG-CCC GGATGGAAGCCCTCG LVIS_1204 1178269 - 1179366 + | proline dipeptidase TERM 1558 1179376 - 1179393 + T 100 -11.3 -5.45802 | opp_overlap 1179367 1179376 GGATAATCCTTTAAA GGACTGG TTAA CCAGTCC TTTTTATTTTGGGCA TERM 1559 1179393 - 1179376 - T 90 -11.3 -3.58533 | opp_overlap 1179376, overlap 1179367 GGATAATCCTTTAAA GGACTGG TTAA CCAGTCC TTTTTATTTTGGGCA TERM 1560 1179439 - 1179416 - T 100 -9.7 -5.06414 | TTTGGGCAATAAAAA GGGATTAAC CGACTC GTTAATCCC GCAATCATGCTTATT LVIS_1205 1179812 - 1179450 - | hypothetical protein LVIS_1206 1180238 - 1179834 - | methyl-accepting chemotaxis-like protein TERM 1561 1180209 - 1180197 - G 78 -5.5 -4.90136 | AACCAAGATCAAAAA CGCAA TTG CTGCG ATCAGGCCCGCTACT LVIS_1207 1180408 - 1181289 + | small-conductance mechanosensitive channel TERM 1562 1181373 - 1181330 - T 100 -13.2 -4.60255 | opp_overlap 1181333, overlap 1181320 1181319 1181331 1181333 ATAAGCCCCTAAAAA TTAGGCGACCAGCGAAAGTC TTCG GATTTTCGCTAGTCGCCTTT TTATGACAATGTGAG TERM 1563 1181372 - 1181331 - T 100 -16.7 -3.3543 | opp_overlap 1181333, overlap 1181320 1181319 1181330 1181333 TAAGCCCCTAAAAAT TAGGCGACCAGCGAAAGTC TTCG GATTTTCGCTAGTCGCCTT TTTATGACAATGTGA TERM 1564 1181333 - 1181370 + T 100 -19.3 -4.84761 | opp_overlap 1181320 1181319 1181333 1181331 1181330 AGCCCCTAAAAATTA GGCGACCAGCGAAAGTC TTCG GATTTTCGCTAGTCGCC TTTTTATGACAATGT TERM 1565 1181370 - 1181333 - T 100 -19.3 -3.23975 | opp_overlap 1181333, overlap 1181320 1181319 1181331 1181330 AGCCCCTAAAAATTA GGCGACCAGCGAAAGTC TTCG GATTTTCGCTAGTCGCC TTTTTATGACAATGT LVIS_1208 1182805 - 1181438 - | major facilitator superfamily permease TERM 1566 1182876 - 1182855 - R 86 -8.9 -4.2679 | opp_overlap 1182855 CAATCGCGATTAAAA TAGTTCAAA TATT TTTGAACTA TTTTACCATACCATC TERM 1567 1182855 - 1182876 + r 83 -8.9 -4.14243 | opp_overlap 1182855 CAATCGCGATTAAAA TAGTTCAAA TATT TTTGAACTA TTTTACCATACCATC TERM 1568 1182951 - 1182931 - R 100 -9.7 -5.61596 | ACCGTTATAAAAAAA GTGATACCG TTT CGGCACCAC TTAACCACGTTACTA LVIS_1209 1183260 - 1182964 - | transcriptional regulator LVIS_1210 1183432 - 1183274 - | hypothetical protein TERM 1569 1183563 - 1183530 - R 80 -4.7 -5.14985 | gap 1, overlap 1183522 CCAAACACACAAAAA CGTGAACTAA-AGTTA TTT TAACCATCAGCCCACG CTCCTAGATTAGTGA LVIS_1211 1184076 - 1183588 - | CBS domain-containing protein LVIS_1212 1184616 - 1184098 - | phosphoesterase LVIS_1213 1185218 - 1184619 - | xanthosine triphosphate pyrophosphatase LVIS_1214 1186050 - 1185220 - | glutamate racemase LVIS_1215 1186242 - 1186766 + | hydrocarbon binding protein TERM 1570 1186817 - 1186849 + T 100 -17.9 -3.65201 | opp_overlap 1186822, overlap 1186822 TTTCAAATTCTAATG AAAAAGCGTGTCGGA TAA TCCGACACGCTTTTA TTATTACAGGTATTG TERM 1571 1186844 - 1186822 - T 100 -17.8 -4.87893 | opp_overlap 1186822 1186817 AATTCTAATGAAAAA GCGTGTCGGA TAA TCCGACACGC TTTTATTATTACAGG TERM 1572 1186822 - 1186844 + T 100 -17.8 -4.89477 | opp_overlap 1186822, overlap 1186817 AATTCTAATGAAAAA GCGTGTCGGA TAA TCCGACACGC TTTTATTATTACAGG LVIS_1216 1187170 - 1186853 - | Thiol-disulfide isomerase and thioredoxin LVIS_1217 1189622 - 1187259 - | MutS family ATPase TERM 1573 1187824 - 1187835 + g 75 -5.8 -4.57837 | ACCACGCTCTTACCA GCAG CCAA CTGC TTTTTACGGAGATCT TERM 1574 1188663 - 1188677 + g 77 -8.6 -4.18488 | GCGACCAATGGTAAT GTCGTT AGC AACGAC TTTCTTGGGGTCAAT LVIS_1218 1190183 - 1189647 - | membrane ancor connecting MutS2 with cell-division Z-ring TERM 1575 1189985 - 1189962 - G 80 -3.1 -5.52023 | overlap 1189966 ACCATTAAGAAAAAA GCTACTGCT TTGGCT AGCAGTCAC CGCACTTACCGAACT TERM 1576 1190146 - 1190114 - G 76 -8.4 -4.12902 | overlap 1190115 1190117 TAATCAGTTGCAAAA CGAGTCCTCGGCGA TAGCC CCGCCGAAAACCCA GAACGAGGATTGCTA LVIS_1219 1190454 - 1190185 - | stimulator of FtsZ polymerization and component of cell-division Z-ring TERM 1577 1190584 - 1190565 - R 100 -10 -5.36441 | opp_overlap 1190565 TCGGCATACAAAAAA GGACGGAA TGTC TTCCGCCC TTTCATCATCGTGAT TERM 1578 1190565 - 1190584 + r 72 -7.8 -3.80841 | opp_overlap 1190565 TCGGCATACAAAAAA GGACGGAA TGTC TTCCGCCC TTTCATCATCGTGAT LVIS_1220 1190910 - 1190599 - | hypothetical protein LVIS_1221 1191356 - 1190919 - | Holliday junction resolvase-like protein LVIS_1222 1191625 - 1191353 - | hypothetical protein LVIS_1223 1194376 - 1191737 - | alanyl-tRNA synthetase LVIS_1224 1196046 - 1194688 - | superfamily II DNA/RNA helicase TERM 1579 1196064 - 1196096 + r 71 -9.1 -3.25088 | opp_overlap 1196080, overlap 1196081 1196093 1196094 ATTTTCTCCTTTAGT GTCCGCCACTAACTG ATC CAGTTCGTGGATGAC TTGGTCAATTTCGGC LVIS_1225 1197008 - 1196043 - | phosphoesterase, DHH family protein LVIS_1226 1198220 - 1197105 - | nucleotidyltransferase/DNA polymerase for DNA repair TERM 1580 1198335 - 1198319 - R 100 -10.1 -5.82388 | opp_overlap 1198318 AAAGCCGAAAAAAAA CGGCCTC CAG GAGACCG CACTTTTATGACACT LVIS_1227 1198775 - 1198350 - | preprotein translocase subunit YajC LVIS_1228 1199992 - 1198847 - | queuine/archaeosine tRNA-ribosyltransferase queA 1201046 - 1200012 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase ruvB 1202079 - 1201063 - | Holliday junction DNA helicase B LVIS_1231 1202703 - 1202095 - | Holliday junction resolvasome, DNA-binding subunit mutL 1204851 - 1202833 - | DNA mismatch repair protein TERM 1581 1202994 - 1203018 + g 70 -7.9 -3.922 | GTAACGCCCGGGCTT GCTGATCGTCA AGG TGATGATTGGC TTTAATTGCCCGTTT LVIS_1233 1207551 - 1204873 - | DNA mismatch repair protein TERM 1582 1206820 - 1206796 - G 80 -7.1 -4.60041 | overlap 1206813 ATCCATCTTCAAAAA GGCCGTTGGTT GAT AAACAACTGCC CGTTGCAAATGCGCT LVIS_1234 1208374 - 1207580 - | calcineurin-like phosphoesterase TERM 1583 1208496 - 1208476 - R 78 -4 -5.15381 | gap 1 AACAGACGTAAAAAA GCTAGAACC AACT GGC-CTAGC TTCTCTGACTTATTT LVIS_1235 1210065 - 1208506 - | HD superfamily hydrolase TERM 1584 1209169 - 1209186 + g 77 -6.9 -4.63993 | opp_overlap 1209148, overlap 1209171 TTGCTCGCCAAGCTC CCGGACG TGTT CGTCCAG TTCTTTTTTGGCCTT TERM 1585 1209926 - 1209972 + g 71 -8.2 -3.62096 | gap 1, opp_overlap 1209942 1209947, overlap 1209927 1209931 GTCTCAGCCTGCTTC TTAGCTTCAGCTAAG-ACACC AGCAGC GGTGTACTTAGCTGCATCTAG TTTCCGCTCGTGAAC LVIS_1236 1210393 - 1210545 + | hypothetical protein TERM 1586 1210586 - 1210615 + T 100 -15.9 -3.45737 | opp_overlap 1210586, overlap 1210574 AAAAGATTATAAAAA CCTCTAAGATCGA TTAG TCGGTCTTAGAGG TTCTGGTCATGATTA TERM 1587 1210615 - 1210586 - T 100 -13.7 -5.02201 | opp_overlap 1210586 1210574 AAAAGATTATAAAAA CCTCTAAGATCGA TTAG TCGGTCTTAGAGG TTCTGGTCATGATTA recA 1211761 - 1210628 - | recombinase A LVIS_1238 1213105 - 1211855 - | nucleotide-utilizing enzyme, CinA LVIS_1239 1213748 - 1213161 - | phosphatidylglycerophosphate synthase TERM 1588 1213802 - 1213775 - R 100 -6.9 -5.72622 | opp_overlap 1213775 1213780 CTTATAAATAAAAAA GCGTACCGGTC GCAACG GACCGACCCGC TTTCTGGTTACTTCA LVIS_1240 1214715 - 1213810 - | Xre-like DNA-binding protein LVIS_1241 1216118 - 1214829 - | Zn-dependent peptidase LVIS_1242 1217391 - 1216096 - | Zn-dependent peptidase TERM 1589 1216487 - 1216497 + g 73 -3.2 -4.84017 | CTGCTAGCATAATAG GCTA GAC TGGC TTTTTCTCGAACATT TERM 1590 1217480 - 1217514 + r 74 -6.6 -4.33803 | gap 1, opp_overlap 1217480 CCGACCACAGAAAAA CACAATGATTTCCCA ACAAGC TGGGCA-TCATTGTG TTTATTGATCTATTT TERM 1591 1217514 - 1217480 - R 89 -7.3 -5.00895 | gap 1, opp_overlap 1217480 CCGACCACAGAAAAA CACAATGATTTCCCAA CAAG CTGGGCA-TCATTGTG TTTATTGATCTATTT LVIS_1243 1218366 - 1217524 - | amino acid ABC transporter periplasmic protein LVIS_1245 1219675 - 1219034 - | ABC-type amino acid transport system, permease component TERM 1592 1219706 - 1219737 + r 89 -11.6 -3.53811 | opp_overlap 1219707, overlap 1219707 CTAACAACTAAAAAA AGCCCCCTTGAGAT TGAA ATCTCAAGAGGGCG TTTGAACGCGGTACC TERM 1593 1219707 - 1219736 + r 100 -15.1 -2.72144 | opp_overlap 1219707, overlap 1219706 TAACAACTAAAAAAA GCCCCCTTGAGAT TGAA ATCTCAAGAGGGC GTTTGAACGCGGTAC TERM 1594 1219736 - 1219707 - R 100 -17.3 -5.71638 | opp_overlap 1219706 1219707 TAACAACTAAAAAAA GCCCCCTTGAGAT TGAA ATCTCAAGAGGGC GTTTGAACGCGGTAC TERM 1595 1219866 - 1219837 - R 100 -15.9 -5.63517 | CGGTGAAATAAAAAA GTCCTCTTAAGTC CAAA GACCTAAGAGGAC GATCACATCGTGGTT LVIS_1246 1220944 - 1220138 - | septum formation inhibitor-activating ATPase LVIS_1247 1221618 - 1220947 - | septum formation inhibitor LVIS_1248 1222164 - 1221637 - | cell shape-determining protein LVIS_1249 1223029 - 1222178 - | cell shape-determining protein TERM 1596 1222763 - 1222777 + g 77 -2.8 -5.2166 | TACTTTAGTCTGAGC CAACTC GCT GACTTG TTTTTTCAGTTGTTG TERM 1597 1223107 - 1223082 - R 75 -7.5 -4.31433 | opp_overlap 1223082 1223081, overlap 1223085 TACCGTCACAATAAA GAAGCGGGAAG CTGC CTTCCCGCTAG TCCCTATTTTTTCTT TERM 1598 1223104 - 1223085 - R 100 -13.6 -4.27512 | opp_overlap 1223082 1223081, overlap 1223082 CGTCACAATAAAGAA GCGGGAAG CTGC CTTCCCGC TAGTCCCTATTTTTT LVIS_1250 1224115 - 1223111 - | Actin-like ATPase for cell morphogenesis LVIS_1251 1224930 - 1224268 - | DNA repair protein TERM 1599 1224367 - 1224341 - G 71 -4.4 -4.67038 | overlap 1224343 1224364 TCCTTAAAACTAAAA TAGCTATGCAGT CCC ACCACAAAGCCA TCCAATAGCGGAATT LVIS_1252 1226292 - 1224970 - | folylpolyglutamate synthase TERM 1600 1226348 - 1226398 + r 100 -15.6 -3.66921 | opp_overlap 1226348 1226353, overlap 1226353 AGATTTTGCCCAAAA TAAAACTGGGTTGGCCCGTCTCCG ATG TGGAAACGACCCAATCCAGTTTTA TTTAAGCTTACAGTT TERM 1601 1226398 - 1226348 - R 100 -17.1 -4.08394 | opp_overlap 1226348 1226353, overlap 1226353 AGATTTTGCCCAAAA TAAAACTGGGTTGGCCCGTCTCC GATGT GGAAACGACCCAATCCAGTTTTA TTTAAGCTTACAGTT TERM 1602 1226353 - 1226393 + r 100 -11.1 -4.90525 | opp_overlap 1226353 1226348, overlap 1226348 TTGCCCAAAATAAAA CTGGGTTGGCCCGTCTCCG ATG TGGAAACGACCCAATCCAG TTTTATTTAAGCTTA TERM 1603 1226393 - 1226353 - R 100 -12.6 -5.07652 | opp_overlap 1226348 1226353, overlap 1226348 TTGCCCAAAATAAAA CTGGGTTGGCCCGTCTCC GATGT GGAAACGACCCAATCCAG TTTTATTTAAGCTTA valS 1229072 - 1226406 - | valyl-tRNA synthetase TERM 1604 1229153 - 1229125 - R 100 -8.2 -5.60993 | GCTGGCACAAAAAAA CTCCCCATCCTA TCAAT TAGGACGAAGAG TCTTCGCGGTACCAC LVIS_1254 1229885 - 1229376 - | peroxiredoxin TERM 1605 1230019 - 1229995 - R 100 -11.5 -6.20267 | opp_overlap 1229995 GGAAAAACAAAAAAA GGAAGTCAACC ATT GGTCAACTTCC TTTCAGATTAAAGTA LVIS_1255 1231244 - 1230027 - | thiamine biosynthesis ATP pyrophosphatase LVIS_1256 1232410 - 1231265 - | cysteine sulfinate desulfinase/cysteine desulfurase TERM 1606 1232556 - 1232528 - R 90 -6 -5.42131 | gap 1, opp_overlap 1232529, overlap 1232529 TAACGACACAAAAAA GCGCGAACC-CTC TAAC GAGCGGTTCACGT TTCCATTAATCTTTA TERM 1607 1232555 - 1232529 - R 81 -9.5 -3.83652 | gap 1, opp_overlap 1232529, overlap 1232528 AACGACACAAAAAAG CGCGAACC-CTC TAAC GAGCGGTTCACG TTTCCATTAATCTTT TERM 1608 1232529 - 1232555 + r 70 -7.3 -3.81461 | gap 1, opp_overlap 1232529 1232528 AACGACACAAAAAAG CGCGAACC-CTC TAAC GAGCGGTTCACG TTTCCATTAATCTTT LVIS_1257 1234292 - 1232562 - | septation ring formation regulator EzrA TERM 1609 1233968 - 1233978 + g 87 -5.4 -5.39681 | opp_overlap 1233959 TAACGAGTAAGGTCA CCTT ATC AAGG TTTTTCTTTAGTTGT LVIS_1258 1234482 - 1234949 + | GAF domain-containing protein rpsD 1235149 - 1235754 + | 30S ribosomal protein S4 TERM 1610 1235779 - 1235798 + F 100 -11.4 -5.88471 | opp_overlap 1235779, overlap 1235767 TAACTGGTGGAAAAA CACCCGTC ATTT GGCGGGTG TTTTTTTTCATGATC TERM 1611 1235798 - 1235779 - f 100 -9.2 -4.58283 | opp_overlap 1235767 1235779 TAACTGGTGGAAAAA CACCCGTC ATTT GGCGGGTG TTTTTTTTCATGATC LVIS_1260 1236033 - 1236368 + | hypothetical protein TERM 1612 1236376 - 1236403 + T 100 -14.2 -5.40004 | opp_overlap 1236376 ACTATTAGTCACAAA CCACCCGGTC AATAAAGA GACCGGGTGG TTTTTTAATTTAATC TERM 1613 1236403 - 1236376 - T 100 -14.2 -3.93963 | opp_overlap 1236376 ACTATTAGTCACAAA CCACCCGGTC AATAAAGA GACCGGGTGG TTTTTTAATTTAATC LVIS_1261 1237012 - 1236413 - | hypothetical protein LVIS_1262 1237089 - 1237544 + | hypothetical protein LVIS_1263 1237561 - 1238838 + | recombination factor protein RarA TERM 1614 1239082 - 1239101 + F 100 -8.6 -5.54338 | AAGCTTTGCTTTGAA GGCCATTC CATT GAATGGTC TTTTTCTTTTGCTTA LVIS_1264 1239215 - 1239502 + | hypothetical protein LVIS_1265 1239599 - 1240078 + | UspA family nucleotide-binding protein TERM 1615 1240111 - 1240141 + T 100 -17 -5.28942 | opp_overlap 1240111 TTAACTATTTAAAAA TGGACGAGAAACCA AAT TGGCTTCTCGTCCA TTTTTATTTACGCTA TERM 1616 1240141 - 1240111 - T 100 -19.2 -4.7078 | opp_overlap 1240111 TTAACTATTTAAAAA TGGACGAGAAACCA AAT TGGCTTCTCGTCCA TTTTTATTTACGCTA LVIS_1266 1241056 - 1240172 - | XRE family transcriptional regulator LVIS_1267 1242941 - 1241385 - | glycerophosphoryl diester phosphodiesterase TERM 1617 1242737 - 1242749 + g 71 -9.1 -3.61536 | opp_overlap 1242737 AATGCCGCCACACCA GCCAC CAT GTGGC TTTGACCGTTAAATT TERM 1618 1242998 - 1242968 - R 100 -14.9 -5.60993 | gap 1 CTGTCCACAAAAAAA GTCGGTTG-GAACG TCTC CGTTCACAACCGAC CATTAAAACAACCTA TERM 1619 1243022 - 1243010 - R 72 -6.3 -4.27443 | opp_overlap 1243010, overlap 1243007 CGACCATTAAAACAA CCTAA GCT TTAGG TTTGTAAGTTGAAGC LVIS_1268 1244153 - 1243011 - | D-alanine-D-alanine ligase related ATP-grasp enzyme TERM 1620 1243810 - 1243786 - G 74 -9.3 -3.73224 | opp_overlap 1243785 CCACTCCCCACGAAA GGCTTTTTCAG TAA CCGGAAAAGCC CTTGGATGGTGCCGT LVIS_1269 1245199 - 1244228 - | hypothetical protein LVIS_1270 1246075 - 1245230 - | membrane protease family stomatin/prohibitin-like protein TERM 1621 1246189 - 1246160 - R 100 -9.3 -5.2112 | AAGACCACTAAAAAA GCCCGGATTACAA CTAG CCGCAATCCGAGC CTTAACTATTAATCT LVIS_1271 1246500 - 1246198 - | glycine cleavage system H protein (lipoate-binding) LVIS_1272 1247719 - 1246514 - | cell division membrane protein TERM 1622 1247797 - 1247765 - R 100 -12.1 -3.96148 | opp_overlap 1247763 1247762 TGTCTTCATTATAAA GGCCGAAGTGAAA TTCGACG TTTCGCTTCGGCC AACTTTACTAAAATT LVIS_1273 1248039 - 1247815 - | hypothetical protein LVIS_1274 1248351 - 1248052 - | hypothetical protein LVIS_1275 1249385 - 1248378 - | Actin-like ATPase for cell morphogenesis TERM 1623 1249504 - 1249485 - R 89 -6.4 -5.35815 | TAGACCAAATAAAAA GGTGGC CAGTACAT GCCACC TCAGCTTTGCTAATT LVIS_1276 1250821 - 1249514 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase LVIS_1277 1251078 - 1250848 - | hypothetical protein TERM 1624 1251229 - 1251251 + r 100 -12 -4.01419 | opp_overlap 1251229 CATTATAAGTAAAAA GGACCTCCCA TTG TGGGAGATCC TTTCGTTAATTGCTG TERM 1625 1251251 - 1251229 - R 100 -14.2 -4.94972 | opp_overlap 1251229 CATTATAAGTAAAAA GGACCTCCCA TTG TGGGAGATCC TTTCGTTAATTGCTG LVIS_1278 1251706 - 1251287 - | F0F1 ATP synthase subunit epsilon LVIS_1279 1253135 - 1251720 - | F0F1 ATP synthase subunit beta TERM 1626 1252329 - 1252311 - G 79 -11.8 -3.09834 | CATTTCAGTAGCCAA CGTTGGTT GGT AACCAACG GCTGAAGGAATCCGA LVIS_1280 1254057 - 1253158 - | F0F1-type ATP synthase, gamma subunit TERM 1627 1253730 - 1253749 + g 73 -7.9 -4.05033 | CGTCTGGATTAGGTG TGCGTTC TTTAAT GAACGCA TTTGTATCCCGTAAA LVIS_1281 1255629 - 1254088 - | F0F1-type ATP synthase, alpha subunit LVIS_1282 1256202 - 1255660 - | F0F1 ATP synthase subunit delta TERM 1628 1255912 - 1255933 + g 71 -6.7 -4.18018 | gap 1, overlap 1255913 ATACAGCACTTGGAA T-TGGTCGAT AAT ATCGACCATA TTTTCCATGCGACCA TERM 1629 1255913 - 1255931 + g 85 -11.8 -3.69216 | overlap 1255912 TACAGCACTTGGAAT TGGTCGAT AAT ATCGACCA TATTTTCCATGCGAC LVIS_1283 1256707 - 1256192 - | F0F1 ATP synthase subunit B LVIS_1284 1256970 - 1256758 - | F0F1 ATP synthase subunit C LVIS_1285 1257725 - 1257006 - | F0F1-type ATP synthase, subunit a TERM 1630 1258029 - 1258071 + r 73 -5.6 -4.56702 | opp_overlap 1258033 1258036, overlap 1258036 TTTATTTCAGCAAAA CAAAGAAGAGATTCGACC CTAAATT GGTCGAATCTCTTTGACG TTTATTTCGTTCCAA TERM 1631 1258067 - 1258033 - R 100 -11.6 -4.72007 | opp_overlap 1258029 1258036, overlap 1258036 TTTCAGCAAAACAAA GAAGAGATTCGACC CTAAATT GGTCGAATCTCTTT GACGTTTATTTCGTT TERM 1632 1258036 - 1258064 + r 100 -13.3 -3.78141 | opp_overlap 1258033 1258036, overlap 1258029 CAGCAAAACAAAGAA GAGATTCGACC CTAAATT GGTCGAATCTC TTTGACGTTTATTTC TERM 1633 1258064 - 1258036 - R 100 -13.3 -4.45807 | opp_overlap 1258036 1258029, overlap 1258033 CAGCAAAACAAAGAA GAGATTCGACC CTAAATT GGTCGAATCTC TTTGACGTTTATTTC upp 1258702 - 1258073 - | uracil phosphoribosyltransferase TERM 1634 1258618 - 1258636 + g 77 -8.8 -4.1711 | opp_overlap 1258620, overlap 1258620 TGACAACTTCACGGA AACTGCGG GTC CCGCAGTC TTTGTTCCGAATAAT TERM 1635 1258634 - 1258620 - G 85 -11.4 -3.67141 | opp_overlap 1258618 1258620 ACAACTTCACGGAAA CTGCGG GTC CCGCAG TCTTTGTTCCGAATA TERM 1636 1258620 - 1258634 + g 85 -11.4 -3.68324 | opp_overlap 1258620, overlap 1258618 ACAACTTCACGGAAA CTGCGG GTC CCGCAG TCTTTGTTCCGAATA LVIS_1287 1260036 - 1258795 - | glycine/serine hydroxymethyltransferase LVIS_1288 1261133 - 1260117 - | putative translation factor (SUA5) LVIS_1289 1262002 - 1261151 - | methylase of polypeptide chain release factor prfA 1263080 - 1261995 - | peptide chain release factor 1 LVIS_1291 1263686 - 1263102 - | thymidine kinase TERM 1637 1263685 - 1263675 - G 75 -3.2 -5.13473 | ACCATACCGAAAAAA TAGC TGC GCCA CGTTACTCCCACCTT LVIS_1292 1263892 - 1265241 + | UDP-N-acetylmuramyl tripeptide synthase LVIS_1293 1265238 - 1265942 + | glutamine amidotransferase TERM 1638 1265955 - 1265985 + T 100 -9.8 -5.33866 | opp_overlap 1265955 TAAAGATATAAAAAA CGATGTGTCCAC CCTACTC GTGGAGACATCG TTTTTTATCAGTTTA TERM 1639 1265985 - 1265955 - T 100 -9.8 -5.51046 | opp_overlap 1265955 TAAAGATATAAAAAA CGATGTGTCCAC CCTACTC GTGGAGACATCG TTTTTTATCAGTTTA LVIS_1294 1267017 - 1265998 - | Beta-lactamase class C related penicillin binding protein TERM 1640 1266982 - 1266996 + g 73 -3.4 -5.0065 | overlap 1266984 GCCGTCCGTTACTAG CCGGTG CAA CGCCAG TTTTGTTTGTGGATA LVIS_1295 1268977 - 1267136 - | ABC-type multidrug transport system, ATPase and permease component LVIS_1296 1270703 - 1268970 - | ABC-type multidrug transport system, ATPase and permease component TERM 1641 1270540 - 1270526 - G 78 -7.8 -4.37711 | opp_overlap 1270525 CGATGAAACTTAAAA GGAGCA TTT TGCCCC CTGTTCGCCAGATGT LVIS_1297 1270872 - 1271201 + | hypothetical protein TERM 1642 1271207 - 1271234 + T 100 -7.7 -5.80364 | opp_overlap 1271207 1271208, overlap 1271208 ATTTGAATAAAAAAA TCGCCATTCAC TGACTC GTGAGTGGCGC TTTTTTTATTCACCT TERM 1643 1271234 - 1271207 - T 95 -5.5 -5.80364 | opp_overlap 1271207 1271208, overlap 1271208 ATTTGAATAAAAAAA TCGCCATTCAC TGACTC GTGAGTGGCGC TTTTTTTATTCACCT TERM 1644 1271233 - 1271208 - T 80 -9 -4.06592 | opp_overlap 1271207 1271208, overlap 1271207 TTTGAATAAAAAAAT CGCCATTCAC TGACTC GTGAGTGGCG CTTTTTTTATTCACC TERM 1645 1271208 - 1271233 + T 90 -11.2 -4.06592 | opp_overlap 1271208 1271207, overlap 1271207 TTTGAATAAAAAAAT CGCCATTCAC TGACTC GTGAGTGGCG CTTTTTTTATTCACC LVIS_1298 1271455 - 1271249 - | hypothetical protein LVIS_1299 1272328 - 1271534 - | Signal transduction diguanylate cyclase TERM 1646 1272122 - 1272110 - G 71 -4.8 -4.60924 | opp_overlap 1272110 CAAAGTTGCTAAAAA GGCA TAATC TGCC ATTTCAATCCAATAG LVIS_1300 1273334 - 1272405 - | IS30 family transposase TERM 1647 1272534 - 1272511 - G 77 -10.4 -3.53343 | AACGTCGTCGTTAAA TCTTGAGCAC TAAT GTGCTCAAAA CGAGTCCCTTTAGGA TERM 1648 1273391 - 1273337 - R 75 -6 -4.5954 | gap 2, opp_overlap 1273337 TTATACTAGACAAAA GATCAGC-TCCTAAAAGATGG-GTTT GTGGT AAACACCATTTTAAAGGAAGCTGATC TTTTTTGTCCGAACA TERM 1649 1273337 - 1273391 + r 100 -8.9 -5.24129 | gap 2, opp_overlap 1273337 TTATACTAGACAAAA GATCAGC-TCCTAAAAGATGG-GTTTG TGG TAAACACCATTTTAAAGGAAGCTGATC TTTTTTGTCCGAACA TERM 1650 1273395 - 1273419 + r 76 -7.9 -4.16943 | overlap 1273399 AGGAAGCTGATCTTT TTTGTCCGAAC AGC GTTCGGATTAA TTTTACAATCTACCA TERM 1651 1273399 - 1273415 + r 84 -10.9 -3.68767 | overlap 1273395 AGCTGATCTTTTTTG TCCGAAC AGC GTTCGGA TTAATTTTACAATCT LVIS_1301 1273705 - 1273376 - | Signal transduction diguanylate cyclase LVIS_1302 1273939 - 1274601 + | C-di-GMP-specific phosphodiesterase TERM 1652 1274610 - 1274635 + F 87 -4.8 -5.49568 | gap 1, opp_overlap 1274610 ATTATAATGATGAAA CAAGACTATCG GGCAA CGGT-GTCTTG TTTTTATTTTGGCTT TERM 1653 1275732 - 1275756 + G 71 -10.1 -2.75992 | overlap 1275724 1275737 CGTGAATCTAGGACT GCTAGTTGTTC TGG GAACAATTGGC TACTATTGGATACGC LVIS_1303 1274671 - 1275774 + | di- and tricarboxylate transporter TERM 1654 1275830 - 1275799 - T 81 -5.1 -5.24129 | GCTGGCCACAAAAAA GCCGTCAACAACG CATAAC CGCAGTTAACGAC TCACCTTCTATTTAG TERM 1655 1275887 - 1275909 + T 100 -11.4 -4.8622 | opp_overlap 1275883 TACACAAGTCAGTGA CTGTTAACCA CCT TGGTTAGCAG TTTTTAATTCAACAA LVIS_1304 1276878 - 1275913 - | VIP2 family actin-ADP-ribosylating toxin TERM 1656 1277076 - 1277038 - H 100 -11.9 -5.18357 | gap 1 TAAGGTACTAAAAAA GCCGCTGTCATAAGG-GT TTTG ACACCCTATGACAACGAC TGATAACAATGATTG TERM 1657 1277431 - 1277466 + H 100 -14.4 -5.77856 | gap 1, opp_overlap 1277431 ACTGATATACTGAAA GGTGATAAAACGTTGAT TTA AT-AACGTTTTATCACC TTTTTTTCGTTTATT TERM 1658 1277466 - 1277431 - H 100 -14.4 -3.74345 | gap 1, opp_overlap 1277431 ACTGATATACTGAAA GGTGATAAAACGTTGAT TTA AT-AACGTTTTATCACC TTTTTTTCGTTTATT TERM 1659 1277773 - 1277786 + GH 71 -3.1 -4.87786 | CTGGGTAAGTTCAGG CTTGT TCGA ACAGG TTTTTCTCGAATTGA LVIS_1307 1277549 - 1277920 + | transposase LVIS_1308 1277893 - 1278324 + | transposase TERM 1660 1278409 - 1278376 - T 84 -6.2 -4.99638 | gap 1, opp_overlap 1278371 1278376 AGATGCATAGAAAAA GACGACAAAC-TC TGATTAAAT GACGTTTGTCGTC TTTTCTGCTTAGCGT TERM 1661 1278376 - 1278409 + T 74 -6.2 -4.54821 | gap 1, opp_overlap 1278376, overlap 1278371 AGATGCATAGAAAAA GACGACAAAC-TC TGATTAAAT GACGTTTGTCGTC TTTTCTGCTTAGCGT LVIS_1309 1278981 - 1278418 - | integral membrane protein LVIS_1310 1279159 - 1279641 + | tryptophan-rich sensory protein TERM 1662 1279661 - 1279683 + T 100 -8.5 -5.72616 | opp_overlap 1279661 CACCTCGCAAAAAAA CTCTAGTCA TAAAT TGGCTAGAG TTTTTTTGTGTAACT TERM 1663 1279683 - 1279661 - T 89 -6.3 -5.41143 | opp_overlap 1279661 CACCTCGCAAAAAAA CTCTAGTCA TAAAT TGGCTAGAG TTTTTTTGTGTAACT TERM 1664 1279992 - 1279964 - T 84 -3.8 -5.45726 | TATATGCTAAAAAAA TGGCGGGCAC TTTAAACCT GTGTCCACCA CCTACTGACTCATTT LVIS_1311 1283024 - 1280007 - | glycosyltransferase TERM 1665 1281387 - 1281407 + g 78 -7.6 -4.33153 | ATTTAACGTGGTCCG CCCATCAG CTTGA TTGATGGG TTTATTCATCTTGAA TERM 1666 1283286 - 1283261 - R 100 -11.9 -5.08601 | opp_overlap 1283261 TTATCCCAACAAAAA TGGCCCAAGGC AAAT GCCTTGAACCA TTTTTTCTTAAGGAT TERM 1667 1283261 - 1283286 + r 95 -7.5 -5.45652 | opp_overlap 1283261 TTATCCCAACAAAAA TGGCCCAAGGC AAAT GCCTTGAACCA TTTTTTCTTAAGGAT LVIS_1312 1284658 - 1283312 - | glucose-6-phosphate isomerase LVIS_1313 1285611 - 1284745 - | putative glucose uptake permease TERM 1668 1285091 - 1285071 - G 83 -8.3 -4.63486 | ATTGTGGGAACAAAA CTGTCTTAG AAT CTAAGCCAG ATCCGGTAACAATTA TERM 1669 1285519 - 1285486 - G 75 -8.1 -4.22883 | opp_overlap 1285501, overlap 1285497 GACTAGGGAAAACAA CCCGAATAAAACGGC CCCT GCCGTCATACCCAGG GTTTGCTGGTAAGAA TERM 1670 1285508 - 1285497 - G 83 -7.2 -4.68705 | opp_overlap 1285501, overlap 1285486 ACAACCCGAATAAAA CGGC CCCT GCCG TCATACCCAGGGTTT TERM 1671 1285766 - 1285730 - R 80 -3.8 -5.41143 | gap 2 TATTGCTCAAAAAAA GACCGTTAGGCGAGTGGT CTA ACCACTCAA--AACGGCC TTTTTTAGCAATTTT LVIS_1314 1286942 - 1285794 - | SAM-dependent methyltransferase LVIS_1315 1288470 - 1287001 - | Signal transduction histidine kinase TERM 1672 1287375 - 1287361 - G 73 -7 -4.18934 | CATGACCTGAACAAA GCGGTC ATA GTCCGC GTAAACCTCAATTTC TERM 1673 1287418 - 1287433 + g 77 -4.6 -4.89521 | overlap 1287420 CAATTCCAGAACATT GCCGGA GTCA TCCGCC TTTTGTTTCAGCTGT TERM 1674 1288116 - 1288126 + g 71 -2.6 -4.95854 | opp_overlap 1288116 CAACGACTTTATGAA TAAT CTG ATTA TTTTTCAATTTTTTC LVIS_1316 1289255 - 1288467 - | DNA-binding response regulator TERM 1675 1288653 - 1288672 + g 71 -4.2 -4.7497 | overlap 1288654 ACGTGAGAATACCTG TCGTGGCT TTTG AGCCAGGG TTTTTAGTAGATCAA TERM 1676 1289984 - 1290006 + H 91 -7 -5.46706 | GGCAGGGCGATGAAA CTGTTAGCTG AAA TAGCTGGCAG TTTTTATTTTGCCCT LVIS_1318 1290283 - 1290381 + | hypothetical protein LVIS_1319 1290394 - 1290501 + | hypothetical protein LVIS_1320 1290754 - 1291134 + | hypothetical protein LVIS_1321 1291216 - 1292139 + | IS30 family transposase TERM 1677 1292377 - 1292403 + T 78 -4.4 -5.10767 | opp_overlap 1292377 1292376 TAGCTATACAAAAAG GCACTCGCCT CATTACA AGGTAAGTGC TTTTTGTCTTACATC TERM 1678 1292412 - 1292428 + T 76 -8.1 -4.11216 | TAAGTGCTTTTTGTC TTACATC TTT GATGTAA TTTTGCCAATCAAAA TERM 1679 1293319 - 1293337 + T 78 -6 -4.90778 | ACAAGTAGTAACTAA GTTCAGTT CTT AACTGGGC TTTTCTTTAACTCGC TERM 1680 1293591 - 1293551 - T 100 -9.7 -5.28983 | GGGAAAACAGAAAAA GGTCCGGTTTCAGGTGACA ATT TGCCAACCATAACCAGACC TTAGCATTGATATAA LVIS_1322 1295448 - 1293616 - | GTP-binding protein LepA TERM 1681 1295587 - 1295621 + r 91 -12.9 -2.87756 | opp_overlap 1295588, overlap 1295584 TTGACCATACGCAAA ACCGCTACGTCATCA GATAG TGGTGGCGTAGCGGC TAGTTAGTTACTTAT TERM 1682 1295620 - 1295588 - R 100 -12 -4.24948 | opp_overlap 1295587 1295584 TGACCATACGCAAAA CCGCTACGTCATCA GATAG TGGTGGCGTAGCGG CTAGTTAGTTACTTA LVIS_1323 1296918 - 1295629 - | D-alanyl transfer protein LVIS_1324 1297155 - 1296922 - | D-alanyl carrier protein LVIS_1325 1298401 - 1297193 - | D-alanyl transfer protein LVIS_1326 1299927 - 1298401 - | D-alanine--D-alanyl carrier protein ligase LVIS_1327 1300116 - 1299967 - | D-Ala-teichoic acid biosynthesis protein (putative) TERM 1683 1300380 - 1300357 - R 100 -11 -5.28778 | opp_overlap 1300357 ATTAGCCACAAAAAA GGCTGCCGAA ACTA CTCAGCAGCC TTGATATATCAACTA LVIS_1328 1301565 - 1300417 - | DnaJ-like molecular chaperone TERM 1684 1301653 - 1301631 - R 100 -8.4 -5.28942 | opp_overlap 1301633 TACTCGAAACAAAAA GCCAAAGCCC CAC GGACTCTGAC TTTTTGCCAAGCCGC LVIS_1329 1303541 - 1301682 - | molecular chaperone LVIS_1330 1304165 - 1303581 - | molecular chaperone GrpE (heat shock protein) hrcA 1305223 - 1304186 - | heat-inducible transcription repressor TERM 1685 1305405 - 1305425 + r 78 -9.8 -3.53012 | AGGACAAAAGGCGCT TAGCTGGT TCACC ACCAGCTA TTTAAAAACGCAAAA TERM 1686 1305473 - 1305434 - R 75 -5.6 -4.67353 | overlap 1305441 CCAGCTATTTAAAAA CGCAAAAGGGCCTGAGAC TTTT GTCCCAGACCCACCTAAG CTTATTGCGTTAACC TERM 1687 1305466 - 1305441 - R 100 -13.3 -4.4874 | overlap 1305434 TTTAAAAACGCAAAA GGGCCTGAGAC TTTT GTCCCAGACCC ACCTAAGCTTATTGC LVIS_1332 1306422 - 1305475 - | FAD synthase TERM 1688 1306161 - 1306177 + g 87 -10.9 -4.0616 | GTTCGACCCCTAATC GCTCCAA CTG TTGGAGC TTTCTGGTTGGGATA LVIS_1333 1307354 - 1306443 - | pseudouridine synthase TERM 1689 1307415 - 1307390 - R 100 -14.1 -4.84359 | opp_overlap 1307390 TTACCGTTATAAAAA GACGCTGATCC AGCT AGATCAGCGTC TTCATGTTCCCATTA TERM 1690 1307390 - 1307415 + r 100 -13.4 -3.37959 | opp_overlap 1307390 TTACCGTTATAAAAA GACGCTGATC CAGCTA GATCAGCGTC TTCATGTTCCCATTA LVIS_1334 1307785 - 1307435 - | ribosome-binding factor A LVIS_1335 1310147 - 1307805 - | translation initiation factor 2 TERM 1691 1309811 - 1309821 + g 73 -4.6 -4.72127 | CATGCTGACGATTCC CGGT TTG GCCG TTATTTTTATTATTG TERM 1692 1309855 - 1309874 + g 83 -6.4 -4.9934 | overlap 1309856 1309858 TTACGTTGTGTTTGA TTAGCAGG TTTT CCTGCTGG TTTTTGTGCTGTTGT TERM 1693 1310119 - 1310136 + g 77 -6.3 -4.61633 | ACATTAATTTCTTTG GCGAGTT CATA AATTCGC TTTTTCCCCATATCT LVIS_1336 1310497 - 1310195 - | ribosomal protein HS6-type (S12/L30/L7a) LVIS_1337 1310786 - 1310490 - | nucleic-acid-binding protein implicated in transcription termination nusA 1312018 - 1310813 - | transcription elongation factor NusA LVIS_1339 1312515 - 1312042 - | hypothetical protein TERM 1694 1312548 - 1312572 + r 71 -8.6 -3.5394 | opp_overlap 1312549, overlap 1312549 1312551 ATTTTTCCATTAAAA AGAGTGAGCA ATGAC TGCTCACTCA TTTAAAAACGAGTTT TERM 1695 1312549 - 1312571 + r 83 -12.1 -2.72043 | opp_overlap 1312549, overlap 1312548 1312551 TTTTTCCATTAAAAA GAGTGAGCA ATGAC TGCTCACTC ATTTAAAAACGAGTT TERM 1696 1312571 - 1312549 - R 100 -12.8 -4.72272 | opp_overlap 1312548 1312549 1312551 TTTTTCCATTAAAAA GAGTGAGCAA TGA CTGCTCACTC ATTTAAAAACGAGTT LVIS_1340 1312917 - 1312642 - | hypothetical protein TERM 1697 1313053 - 1313022 - R 100 -13.2 -4.37711 | opp_overlap 1313022 1313025 CTATTAAATTCAAAA GAAGAATCATGGCT ACTT AACCATGACTCTTC TTTAACATTAATTTA TERM 1698 1313022 - 1313053 + r 75 -8.8 -3.70505 | opp_overlap 1313022, overlap 1313025 CTATTAAATTCAAAA GAAGAATCATGGCT ACTT AACCATGACTCTTC TTTAACATTAATTTA LVIS_1341 1317403 - 1313066 - | DNA polymerase III PolC TERM 1699 1317456 - 1317431 - R 100 -13.3 -4.07568 | opp_overlap 1317418 1317431 1317433, overlap 1317411 TTCGTCTGGCTAAAA GAGGCCAGGAC GTTT GTCCCGACCTC TCATATCCAAAACTC LVIS_1342 1319204 - 1317495 - | prolyl-tRNA synthetase LVIS_1343 1320517 - 1319240 - | membrane-associated Zn-dependent protease 1 LVIS_1344 1321404 - 1320613 - | CDP-diglyceride synthetase LVIS_1345 1322214 - 1321426 - | undecaprenyl pyrophosphate synthase TERM 1700 1322283 - 1322261 - R 100 -12.7 -5.89921 | ATCATAACAAAAAAA GGACCGGGA AACTA TCCCGGCCC CCAAATTGAGCGAAA LVIS_1346 1322739 - 1322317 - | hypothetical protein LVIS_1348 1324047 - 1323325 - | uridylate kinase TERM 1701 1324181 - 1324155 - R 100 -11.6 -5.45652 | opp_overlap 1324155, overlap 1324125 ATTGCTAACAAAAAA GCGTAGTTTCCC AAC GGAAACCTACGC TTTTCTGACAAATTA TERM 1702 1324155 - 1324181 + r 100 -10.3 -4.386 | gap 1, opp_overlap 1324125 1324155 ATTGCTAACAAAAAA GCGTA-GTTTCC CAAC GGAAACCTACGC TTTTCTGACAAATTA LVIS_1349 1325078 - 1324194 - | translation elongation factor Ts TERM 1703 1324351 - 1324363 + g 70 -7.7 -3.85817 | TTAACGAATGGTTGG TCAGC TAA GCTGA TTTCTGACAAGAACT TERM 1704 1325136 - 1325124 - R 81 -4.1 -5.36314 | TAAAACACCAAAAAA GACTG ACT CAATC TCAGGCCATTATCGG TERM 1705 1325216 - 1325201 - R 70 -7.6 -3.59262 | opp_overlap 1325195 TCTTATATTTGGAAA GTGTCA GTAC TGACAC CTTGCATTTAATTAC LVIS_1350 1326031 - 1325228 - | ribosomal protein S2 TERM 1706 1325310 - 1325330 + g 80 -9.1 -4.28361 | CCTTCAGCGGCTTCA GACTTTTGA CCT TCAAAGGTC TTTTCGTCAACTTGG TERM 1707 1325647 - 1325632 - G 70 -7.6 -3.95584 | TCTTCAGCAAGGAAA CTTCCT TCTT AGGAAG AACATCAAACGTGCC TERM 1708 1326473 - 1326456 - g 71 -6.3 -4.24342 | gap 1 GGTCTCATGAAGAAA TG-GCCGT TAA ACGGCTCA ATCACGCGTTACACC TERM 1709 1326902 - 1326891 - g 71 -7.2 -3.97636 | opp_overlap 1326890 ACCGTAATTTAGAAA CGCC AGAC GGCG ATTGGATTCCCGATC LVIS_1351 1326269 - 1326988 + | HAD superfamily hydrolase TERM 1710 1327095 - 1327058 - T 100 -7.9 -6.23317 | opp_overlap 1327058 ATAAAAATAAAAAAA TCAGTACCTTCAG TTGCAGTAAACG CTGAAGGTACCGA TTTTTTTGTTGTAAT TERM 1711 1327058 - 1327095 + T 100 -6.4 -5.89921 | opp_overlap 1327058 ATAAAAATAAAAAAA TCAGTACCTTCAGT TGCAGTAAAC GCTGAAGGTACCGA TTTTTTTGTTGTAAT LVIS_1352 1328109 - 1327111 - | lactate dehydrogenase related 2-hydroxyacid dehydrogenase LVIS_1353 1328462 - 1328193 - | URI-like endonuclease TERM 1712 1328220 - 1328232 + g 78 -7.7 -4.44974 | GCCATGATTGGCTAG GAAGG TGA CCTTC TTTTGTCGACTTTGA LVIS_1354 1329195 - 1328449 - | O-methyltransferase TERM 1713 1329603 - 1329577 - g 87 -10.8 -4.25104 | opp_overlap 1329576 1329579 CTTCTGCCATCAAAA CACCTGTGCGCA TTC TGCGCCAAGGTG ATCTATCCTTAATTA LVIS_1355 1329291 - 1329932 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1714 1329940 - 1329974 + T 100 -10.8 -5.88471 | opp_overlap 1329940 1329942, overlap 1329942 CGAATTAACTAAAAA TTGCCCTGTTCAGAAG TTA TTTCCGAATAGGGCGA TTTTTTTTAATAGTA TERM 1715 1329974 - 1329940 - T 95 -7.9 -4.93547 | opp_overlap 1329940 1329942, overlap 1329942 CGAATTAACTAAAAA TTGCCCTGTTCAGAA GTTAT TTCCGAATAGGGCGA TTTTTTTTAATAGTA TERM 1716 1329972 - 1329942 - T 74 -10.5 -2.71941 | opp_overlap 1329940 1329942, overlap 1329940 AATTAACTAAAAATT GCCCTGTTCAGAA GTTAT TTCCGAATAGGGC GATTTTTTTTAATAG TERM 1717 1329942 - 1329972 + T 79 -11.2 -3.05247 | opp_overlap 1329942 1329940, overlap 1329940 AATTAACTAAAAATT GCCCTGTTCAGAAG TTA TTTCCGAATAGGGC GATTTTTTTTAATAG LVIS_1356 1331786 - 1329993 - | ABC-type multidrug transport system, ATPase and permease component TERM 1718 1333665 - 1333636 - R 100 -17.3 -5.48623 | AAATACAAATAAAAA GACTCGTCTCCCA CAAA TGGGAAACGAGTC GAGATTAACCGTTAT LVIS_1358 1333901 - 1333677 - | hypothetical protein TERM 1719 1333994 - 1333967 - R 90 -7.1 -5.22258 | gap 1, opp_overlap 1333975 TAAAGCAAAATAAAA GAGCGAATC-CT AGAAA AGCGACTCGCTC ATCAGGTTAATCGTC LVIS_1359 1334249 - 1334001 - | hypothetical protein TERM 1720 1335090 - 1335068 - R 100 -12.1 -5.52384 | opp_overlap 1335068 TGTTCATTAAAAAAA GCATTTGGC AGTTG GCCAAATGC TTTTTTGTCGTCTAA TERM 1721 1335068 - 1335090 + r 100 -12.1 -5.34555 | opp_overlap 1335068 TGTTCATTAAAAAAA GCATTTGGC AGTTG GCCAAATGC TTTTTTGTCGTCTAA LVIS_1361 1335542 - 1335102 - | nucleoside 2-deoxyribosyltransferase LVIS_1362 1335769 - 1336359 + | hypothetical protein TERM 1722 1336355 - 1336394 + T 100 -16 -3.65522 | opp_overlap 1336365, overlap 1336365 AAAATAAATTTGAGT CATAAAAAAAGGCCAGAA TACA TTCTGGCCTTTTTTGGTG TTATTGGCGTCGATA TERM 1723 1336384 - 1336365 - T 100 -12.2 -5.64274 | opp_overlap 1336365 1336355 TGAGTCATAAAAAAA GGCCAGAA TACA TTCTGGCC TTTTTTGGTGTTATT TERM 1724 1336365 - 1336384 + T 100 -12.2 -5.31545 | opp_overlap 1336365, overlap 1336355 TGAGTCATAAAAAAA GGCCAGAA TACA TTCTGGCC TTTTTTGGTGTTATT LVIS_1363 1337564 - 1336395 - | 3-hydroxy-3-methylglutaryl CoA synthase TERM 1725 1337419 - 1337433 + g 73 -8.5 -3.8125 | overlap 1337417 ACGACATCCTGGGTT GGCGG AATCA CCGCC TGTTTTGATTGACCG TERM 1726 1337678 - 1337699 + r 81 -5.2 -5.1963 | AAGCATTTAGATTTC GCCTTAGA GCCACA TTTAAGGC TTTTTGTTAGTTACA LVIS_1364 1338591 - 1337710 - | hypothetical protein LVIS_1365 1338752 - 1339414 + | phosphoglycerate mutase family protein LVIS_1366 1339427 - 1339609 + | putative stress-responsive transcriptional regulator TERM 1727 1339617 - 1339637 + F 100 -10.4 -5.20216 | CGGCTTAATTTTGAA GCGCTTGG TTTTT CCGAGCGC TTTTTTAATGATCTA TERM 1728 1340070 - 1340032 - g 71 -4.5 -4.56775 | gap 1, overlap 1340034 ATCTCGCTGGAAAAA CGCGGCCGAACGATGCCC AGCC AGGCACGATTCGGG-GCG ACTTTGCTCATGCCT LVIS_1367 1339752 - 1340216 + | nucleoside diphosphate kinase TERM 1729 1340230 - 1340245 + F 100 -10.4 -5.14563 | opp_overlap 1340230 1340226 1340224 AAATTCAAACATCAA CGGCCA TCTT TGGCCG TTTTTTAATACGCCA TERM 1730 1340245 - 1340230 - f 80 -10.4 -3.48703 | opp_overlap 1340230, overlap 1340226 1340224 AAATTCAAACATCAA CGGCCA TCTT TGGCCG TTTTTTAATACGCCA LVIS_1368 1340297 - 1340503 + | hypothetical protein TERM 1731 1340495 - 1340552 + T 72 -7.9 -3.80573 | opp_overlap 1340501 1340504 1340510, overlap 1340499 1340504 1340510 TTATACGCAACACCC GTTAAATAACTAAAACCGGTTGCTAGT TGAT GCTGACGACCGGTTTTAGTTATCTGGA TTTAGTGATACTGGG TERM 1732 1340499 - 1340548 + T 91 -13.1 -2.68775 | opp_overlap 1340501 1340504 1340510, overlap 1340495 1340504 1340510 ACGCAACACCCGTTA AATAACTAAAACCGGTTGCTAGT TGAT GCTGACGACCGGTTTTAGTTATC TGGATTTAGTGATAC TERM 1733 1340546 - 1340501 - T 100 -12.8 -3.57615 | opp_overlap 1340499 1340495 1340504 1340510, overlap 1340504 1340510 GCAACACCCGTTAAA TAACTAAAACCGGTTGCTAG TTGATG CTGACGACCGGTTTTAGTTA TCTGGATTTAGTGAT TERM 1734 1340543 - 1340504 - T 86 -10.1 -3.91984 | opp_overlap 1340499 1340495 1340504 1340510, overlap 1340501 1340510 ACACCCGTTAAATAA CTAAAACCGGTTGCTAG TTGATG CTGACGACCGGTTTTAG TTATCTGGATTTAGT TERM 1735 1340504 - 1340543 + T 100 -13 -3.58199 | opp_overlap 1340504 1340501 1340510, overlap 1340499 1340495 1340510 ACACCCGTTAAATAA CTAAAACCGGTTGCTAGT TGAT GCTGACGACCGGTTTTAG TTATCTGGATTTAGT TERM 1736 1340510 - 1340537 + T 74 -6.2 -4.53034 | opp_overlap 1340504 1340501 1340510, overlap 1340504 1340499 1340495 GTTAAATAACTAAAA CCGGTTGCTAGT TGAT GCTGACGACCGG TTTTAGTTATCTGGA LVIS_1369 1341136 - 1340699 - | hypothetical protein TERM 1737 1341454 - 1341491 + r 87 -6.4 -5.24416 | opp_overlap 1341454 ACGAGTTATAAAAAA TAGGAACCTCGCTAAA CGTTGA TTTAACGGGATTCCTA TTTTTATTATACTTC TERM 1738 1341491 - 1341454 - R 100 -9.3 -5.28778 | opp_overlap 1341454 ACGAGTTATAAAAAA TAGGAACCTCGCTAAAC GTTG ATTTAACGGGATTCCTA TTTTTATTATACTTC LVIS_1371 1342061 - 1341663 - | hypothetical protein LVIS_1372 1342280 - 1343170 + | diacylglycerol kinase family lipid kinase LVIS_1373 1343556 - 1343167 - | hypothetical protein TERM 1739 1343219 - 1343200 - G 78 -9.3 -4.08221 | overlap 1343175 1343172 TCCAAGATAATGAAA GTCAGGG TCTCGC CCCTGAC AATAACACGCAAAGG TERM 1740 1343779 - 1343758 - H 89 -11.6 -3.53012 | opp_overlap 1343758 CTGTCTCCTTTGAAA CCGAGTGG CCCTAT CCACTCGG TTTTTTGCTATTCTG TERM 1741 1343758 - 1343779 + H 100 -11.6 -5.30189 | opp_overlap 1343758 CTGTCTCCTTTGAAA CCGAGTGG CCCTAT CCACTCGG TTTTTTGCTATTCTG LVIS_1374 1343906 - 1344118 + | hypothetical protein TERM 1742 1344518 - 1344542 + G 73 -10.1 -3.26444 | overlap 1344516 TAACGCCTTCTCCCG GTTAGTGATTG GTT CAACCACTAAC TATATTGTTCAGCAC LVIS_1375 1344156 - 1344611 + | UspA family nucleotide-binding protein TERM 1743 1344624 - 1344671 + T 100 -17.3 -2.80195 | opp_overlap 1344629, overlap 1344629 TAATTTCAAGTTAAT CAAAAGCGCCAATCAGCTTTC CTAATC GGAAGTTGATTGGCGCTTTTC TACTTAGTACTGCAT TERM 1744 1344666 - 1344629 - T 100 -13.6 -4.45664 | gap 1, opp_overlap 1344624 1344629 TCAAGTTAATCAAAA GCGCCAATCAGCTTTCC TAATC GGAA-GTTGATTGGCGC TTTTCTACTTAGTAC TERM 1745 1344629 - 1344666 + T 100 -17.2 -4.56607 | opp_overlap 1344629, overlap 1344624 TCAAGTTAATCAAAA GCGCCAATCAGCTTTC CTAATC GGAAGTTGATTGGCGC TTTTCTACTTAGTAC LVIS_1376 1345193 - 1344675 - | adenine phosphoribosyltransferase TERM 1746 1344765 - 1344753 - G 73 -3.3 -4.90013 | opp_overlap 1344764 TAATTCAATCAAAAA GGCCG TTC CAACC ACGATACCACCGAGG LVIS_1377 1347532 - 1345211 - | single-stranded DNA-specific exonuclease TERM 1747 1347584 - 1347562 - R 84 -9.8 -3.76413 | opp_overlap 1347562, overlap 1347555 TTCTAAAACGGTAAA GAGCGGTGTC AAT GGCACCACTC TTCTCAATAAACCTA TERM 1748 1347562 - 1347584 + r 76 -9.8 -3.35996 | opp_overlap 1347555 1347562 TTCTAAAACGGTAAA GAGCGGTGTC AAT GGCACCACTC TTCTCAATAAACCTA LVIS_1378 1347986 - 1347597 - | hypothetical protein LVIS_1379 1348936 - 1347983 - | beta-lactamase superfamily hydrolase LVIS_1380 1349109 - 1349384 + | hypothetical protein LVIS_1381 1349399 - 1350154 + | hypothetical protein TERM 1749 1350154 - 1350209 + T 74 -9.9 -3.07344 | gap 1, opp_overlap 1350169, overlap 1350169 AACACTAACAGTTTA AGCCCAAACAAAAAAGACGT-CCCGT ACGCA ACGGTCACGTCTTTTTTGTTAGGCCA TATATTCAAAGGTAA TERM 1750 1350194 - 1350169 - T 90 -4 -5.64421 | gap 1, opp_overlap 1350154 1350169 AGCCCAAACAAAAAA GACGT-CCCGT ACGCA ACGGTCACGTC TTTTTTGTTAGGCCA TERM 1751 1350169 - 1350194 + T 85 -4 -5.4505 | gap 1, opp_overlap 1350169, overlap 1350154 AGCCCAAACAAAAAA GACGT-CCCGT ACGCA ACGGTCACGTC TTTTTTGTTAGGCCA obgE 1351497 - 1350202 - | GTPase ObgE uvrC 1353402 - 1351585 - | excinuclease ABC subunit C TERM 1752 1353364 - 1353349 - G 79 -11.8 -3.10796 | opp_overlap 1353337 TTTCATGAGGTAACA GCCGGG AAGG CCCGGC AGTAACGCAAGCTTA LVIS_1384 1353560 - 1353748 + | hypothetical protein TERM 1753 1353781 - 1353761 - T 100 -12.6 -4.33808 | opp_overlap 1353761 TAAATCAATCGAAAA GGACGACC ACAAG GGTCGTCC TTTTTTGTTACCGAT TERM 1754 1353761 - 1353781 + T 100 -12.6 -5.45652 | opp_overlap 1353761 TAAATCAATCGAAAA GGACGACC ACAAG GGTCGTCC TTTTTTGTTACCGAT LVIS_1385 1354088 - 1353789 - | pyrophosphatase LVIS_1386 1354684 - 1354091 - | GTPase EngB TERM 1755 1354845 - 1354822 - R 95 -7.4 -5.4505 | GCGTCCAACAAAAAA GTGGCTAGCC CATC AGCTAGTCAC TCTCCGTGTAAATGA clpX 1356122 - 1354866 - | ATP-dependent protease ATP-binding subunit TERM 1756 1356330 - 1356304 - R 100 -15.2 -5.25799 | opp_overlap 1356304 1356301 AAAATAACAGAAAAA CCGGAACAACAG TGC CTGTCGTCCCGG TCATGTCTAACAACA TERM 1757 1356304 - 1356330 + r 76 -10.8 -2.69151 | opp_overlap 1356304, overlap 1356301 AAAATAACAGAAAAA CCGGAACAACAG TGC CTGTCGTCCCGG TCATGTCTAACAACA tig 1357660 - 1356350 - | trigger factor TERM 1758 1357891 - 1357864 - R 100 -13.6 -5.07652 | gap 1 TTGCGTAAAATAAAA GGGC-CGAAAAGT TAA ACTTTTCGAGCCC TCTCGGTACTAACTA LVIS_1389 1359104 - 1357914 - | elongation factor Tu LVIS_1390 1360242 - 1359313 - | TPR repeat-containing protein TERM 1759 1360306 - 1360275 - R 100 -13.7 -4.15854 | opp_overlap 1360275 AAAGTGATGGCAAAA CGGGTCGCTAGCC TAACTG GACTGGCGACCCG TTTTAAATTTATGCG TERM 1760 1360275 - 1360306 + r 100 -14.5 -4.39571 | gap 1, opp_overlap 1360275 AAAGTGATGGCAAAA CGGGTCGCTAG-CC TAACT GGACTGGCGACCCG TTTTAAATTTATGCG LVIS_1391 1362147 - 1360315 - | metallo-beta-lactamase superfamily hydrolase TERM 1761 1361638 - 1361648 + g 71 -8.2 -3.74747 | opp_overlap 1361637 GTCAGTTTGATAACC CGGC TTA GCCG TTTGATCGAACTTGA TERM 1762 1362336 - 1362311 - R 100 -11.9 -5.64421 | AGGGCAAAGAAAAAA GCCCCTCTCCA AAGA TGGAAAGGGAC TCGGTGCGACGAATT LVIS_1392 1362619 - 1362350 - | ribosomal protein S15P/S13E rpsT 1362897 - 1363151 + | 30S ribosomal protein S20 TERM 1763 1363213 - 1363182 - T 95 -13 -3.1211 | opp_overlap 1363185, overlap 1363169 1363185 GATTAGATGATGCAA TCAGGGCGTTGACC ATAT GGTCAACGCCCTTT TTTGCTGCTTCTTAT TERM 1764 1363185 - 1363210 + T 100 -19.1 -5.22794 | opp_overlap 1363185 1363182 1363169 TAGATGATGCAATCA GGGCGTTGACC ATAT GGTCAACGCCC TTTTTTGCTGCTTCT TERM 1765 1363210 - 1363185 - T 100 -19.1 -2.7674 | opp_overlap 1363185, overlap 1363182 1363169 TAGATGATGCAATCA GGGCGTTGACC ATAT GGTCAACGCCC TTTTTTGCTGCTTCT holA 1364253 - 1363225 - | DNA polymerase III subunit delta TERM 1766 1363985 - 1364005 + g 78 -11.2 -3.37056 | TTTTGTTTTTTCGTT TCCCCAGT CAAAA ACTGGGGA TTATCAATGCATACT TERM 1767 1364051 - 1364041 - G 80 -4.6 -5.14965 | ACGTTCACCAAAAAA CGGC GCT GCCA TGGCATCATCCAAAG LVIS_1395 1366373 - 1364250 - | metallo-beta-lactamase superfamily hydrolase TERM 1768 1365277 - 1365264 - G 73 -2.3 -5.06414 | CTGTTCTAATAAAAA GGCAC ACGC GTGAC TAAGTCCTGGTAACC TERM 1769 1365588 - 1365599 + g 85 -5.8 -5.14563 | CGTTAACGTGTCTAC CTGG CTTC CCAG TTTTTTACTAGCCAG LVIS_1396 1366996 - 1366517 - | deoxycytidylate deaminase LVIS_1397 1367740 - 1367045 - | DNA uptake protein related DNA-binding protein TERM 1770 1367211 - 1367239 + g 90 -14.7 -2.65815 | TGGAGCTCGGTTACG GTTGCGGTATTCA AAT TGACTACCGCAAC TGGTGTCCCTGTCGC TERM 1771 1367541 - 1367571 + g 85 -11.9 -3.61894 | TGACTACTACTGGCT GTCGGGCTGGTTG CCACT TGACCAGCTCGAC TTGTTGCCGACGCTT TERM 1772 1367829 - 1367805 - R 100 -10 -5.62219 | opp_overlap 1367805 AAGACATTAAAAAAA GCCTGGTCGG CAATC CCAACCAAGC TTCTAAGTTATTTAA LVIS_1398 1368890 - 1367841 - | Lon-like protease LVIS_1399 1369376 - 1368891 - | phosphopantetheine adenylyltransferase LVIS_1400 1369936 - 1369373 - | N6-adenine-specific methylase LVIS_1401 1370220 - 1369933 - | hypothetical protein LVIS_1402 1371396 - 1370242 - | cell division membrane protein TERM 1773 1370800 - 1370790 - G 73 -3.2 -4.90525 | GAATGGGAAAGAAAA CACC AAC GATG ATGAAAAAGGCGCCA TERM 1774 1371500 - 1371462 - R 100 -20.6 -2.87468 | overlap 1371490 TTTCATTATAGCATA GCTGTTGCCGGTTTTT ACCACAA AAAAACCGGCAACAGC CGTGGTAGACCCACG TERM 1775 1371526 - 1371490 - R 100 -13 -5.67063 | overlap 1371462 TTTACCACAAAAAAA CCGGCAACAGCCGTGG TAGAC CCACGACTCTCACCGG TAAAGATTCAATTAA LVIS_1403 1373394 - 1371550 - | stress response membrane GTPase TERM 1776 1373438 - 1373461 + r 81 -9.6 -3.80733 | opp_overlap 1373459, overlap 1373453 ATTAGATGGATCACG GCGCACTTAC CTCG GTAAGTACGC TTATTGTAGCGTCAA TERM 1777 1373537 - 1373520 - R 100 -9.9 -5.61596 | AGCCGCATAAAAAAA CTGTGAC AGGG GTCACAG TGAGACGTCATCTTC TERM 1778 1373537 - 1373579 + r 85 -5.6 -5.1675 | GTGACAGGGGTCACA GTGAGACGTCATCTTCTTCA ATT TGGAGAATATCACGTTGCGC TTTTTTCGTCGCTAC LVIS_1404 1374323 - 1373532 - | fructose-1 6-bisphosphatase TERM 1779 1374221 - 1374271 + g 73 -5.6 -4.56597 | gap 2, overlap 1374219 1374218 TACGATTCGACTTTG CTGCCACCGTCAGCGGTTCTTGCA TTTTT TGTAAGACTTGCTGGCG-TG-CAG TTTTTAGCAACGACA LVIS_1405 1374613 - 1374332 - | hypothetical protein LVIS_1406 1375523 - 1374615 - | malate/lactate dehydrogenase TERM 1780 1375698 - 1375673 - R 100 -10.5 -5.74122 | TATTATACAAAAAAA GAGATCAGAGC TTTC GCCCTAATCTC TCAATACACATACTG TERM 1781 1375757 - 1375737 - R 73 -9.7 -2.95339 | ACAAAACTTTAGATA TGCGTTGGG AAG CCCAAAGCA ATATCAGCCGTTTCT LVIS_1407 1377157 - 1375730 - | dihydrolipoamide dehydrogenase TERM 1782 1377116 - 1377137 + g 81 -3.7 -5.42862 | gap 1, opp_overlap 1377105, overlap 1377114 1377116 GTAACCGCCGGGTCC GG-CACCG ATGATGA CGGTGTCC TTTTTTTCAACATCT LVIS_1408 1378484 - 1377165 - | acetoin/pyruvate dehydrogenase complex, E2 component, dihydrolipoamide succinyltransferase TERM 1783 1378141 - 1378112 - G 72 -10.7 -2.64416 | opp_overlap 1378114, overlap 1378111 1378114 TATTGGGATCAGAAG CAGCAGGAACTCC AGTT GGAGCCGCTGCTG GTTCAGCAGGTGCTG TERM 1784 1378486 - 1378496 + r 70 -5.4 -4.54205 | AACGTATAAGCCATG GGAA AAC TTCC TTTCTTTCATCTAAT LVIS_1409 1379537 - 1378560 - | acetoin dehydrogenase complex, E1 component, beta subunit LVIS_1410 1380655 - 1379540 - | acetoin dehydrogenase complex, E1 component, alpha subunit TERM 1785 1380841 - 1380859 + H 75 -6 -4.65819 | TTTTCGTCTTTTTTT GAAAACCG CAA CCGTTTTC TTTTCATTTCATTTT def 1380933 - 1381493 + | peptide deformylase TERM 1786 1381551 - 1381507 - T 100 -19.1 -3.86312 | opp_overlap 1381519, overlap 1381509 1381519 AGTTACAATTAAGAA GATAAATAAAAAGGATACCAA ATT TTGGTATCCTTTTTATTTATT CAACAACATCGTCTA TERM 1787 1381549 - 1381509 - T 100 -21.7 -3.51235 | opp_overlap 1381519, overlap 1381507 1381519 TTACAATTAAGAAGA TAAATAAAAAGGATACCAA ATT TTGGTATCCTTTTTATTTA TTCAACAACATCGTC TERM 1788 1381519 - 1381539 + T 100 -12.7 -5.47159 | opp_overlap 1381509 1381507 1381519 GAAGATAAATAAAAA GGATACCAA ATT TTGGTATCC TTTTTATTTATTCAA TERM 1789 1381539 - 1381519 - T 100 -12.7 -5.4659 | opp_overlap 1381519, overlap 1381509 1381507 GAAGATAAATAAAAA GGATACCAA ATT TTGGTATCC TTTTTATTTATTCAA LVIS_1412 1382044 - 1381547 - | hypothetical protein LVIS_1413 1382248 - 1382466 + | hypothetical protein TERM 1790 1382547 - 1382537 - g 75 -3.2 -5.12707 | TGAAATTGGAAAAAA CACC TAT GGTA TTCAATTCCAAGATG TERM 1791 1383615 - 1383596 - g 71 -2.8 -5.00467 | gap 1, overlap 1383588 1383598 TCAAGAAGAACAAAA GC-TCATGC TAC GCTTGATGC AGCCTAAATTTTTCA LVIS_1414 1382463 - 1384142 + | mRNA degradation ribonuclease J1/J2enzyme TERM 1792 1384170 - 1384150 - f 93 -11.2 -4.17023 | opp_overlap 1384150 CTAAGTAGCTTAAAA GCCGAGAT TGCTG ATCTCGGC TTTTTTTATTGTCTT TERM 1793 1384150 - 1384170 + F 100 -11.9 -5.94214 | opp_overlap 1384150 CTAAGTAGCTTAAAA GCCGAGATT GCT GATCTCGGC TTTTTTTATTGTCTT LVIS_1415 1384295 - 1385254 + | diacylglycerol kinase family protein TERM 1794 1385297 - 1385268 - T 100 -20.9 -4.38774 | opp_overlap 1385268 AAGATCATAGTAAAA GAGGCGTCATCAC AATT GTGATGACGCCTC TTTTCAATATTAGCA TERM 1795 1385268 - 1385297 + T 100 -20.9 -4.28254 | opp_overlap 1385268 AAGATCATAGTAAAA GAGGCGTCATCAC AATT GTGATGACGCCTC TTTTCAATATTAGCA LVIS_1416 1385522 - 1385316 - | hypothetical protein TERM 1796 1385839 - 1385796 - R 100 -14.8 -4.2558 | opp_overlap 1385796 1385799 CATGCTCCACCAAAA TAACCCGACCTTTGCCAATC TTAA AACCGGCAAAAGTCAGGTTA TCATTCGGATTCATT LVIS_1417 1387456 - 1385858 - | cell wall-associated hydrolase TERM 1797 1385904 - 1385918 + g 76 -7.2 -4.3898 | AAATACTTACTGATT TGTTGA ACT TCAACA TTTTGTCCCGGTGCT TERM 1798 1386546 - 1386570 + g 75 -7.8 -4.15066 | gap 1 TGGCTACTCTCATTA GCCGGCGCTAC CGGA GTTGC-CCGGC TTTGCTTTGTCACTG TERM 1799 1387257 - 1387271 + g 74 -2.8 -5.0916 | AAAATCAGATCCGTT TGGG CATCAAT CCCA TTTTTCTGTTCAAGA TERM 1800 1387896 - 1387882 - R 100 -7.1 -5.70829 | opp_overlap 1387881 1387882 AACAGCACAAAAAAA GACGC TCATC GCGTC CATTTTGTTTTCTTA LVIS_1418 1388939 - 1387917 - | hypothetical protein LVIS_1419 1389942 - 1389052 - | cell wall-associated hydrolase TERM 1801 1390022 - 1390051 + r 83 -9.3 -4.02905 | opp_overlap 1390027, overlap 1390027 GGATCAGACTTTTCA AAAAACGACCCGC CGCA GCGAGTCGTTTTA TCTTTTTCATCTAGT TERM 1802 1390027 - 1390046 + r 100 -9.2 -5.00027 | opp_overlap 1390027, overlap 1390022 AGACTTTTCAAAAAA CGACCCGC CGCA GCGAGTCG TTTTATCTTTTTCAT TERM 1803 1390046 - 1390027 - R 100 -11.4 -5.02476 | opp_overlap 1390027 1390022 AGACTTTTCAAAAAA CGACCCGC CGCA GCGAGTCG TTTTATCTTTTTCAT LVIS_1420 1392086 - 1390062 - | transketolase TERM 1804 1392109 - 1392129 + r 74 -6.2 -4.48221 | gap 1, opp_overlap 1392109 1392108 1392111 TAACCTCACTTAAAT TAGCCG-GA CCAA TCACGGCTA TTTTCTAAATTACTG TERM 1805 1392376 - 1392340 - R 100 -18.4 -5.82172 | opp_overlap 1392344 1392347, overlap 1392373 ATGAACACAAAAAAA CCGATAATTTTTCTGA AAAAA TCAGAAAAATTATCGG TTAGACCAATTTATT TERM 1806 1392344 - 1392372 + r 73 -10.6 -2.52795 | opp_overlap 1392340, overlap 1392347 ACACAAAAAAACCGA TAATTTTTCTGA AAAAA TCAGAAAAATTA TCGGTTAGACCAATT LVIS_1421 1393320 - 1392400 - | ribokinase family sugar kinase TERM 1807 1393383 - 1393393 + r 82 -3.2 -5.54192 | GTATTGCTGACACAC CGAG CAA TTCG TTTTTTTCGATTACT LVIS_1422 1394477 - 1393455 - | ribose operon repressor TERM 1808 1394608 - 1394583 - R 81 -4 -5.28481 | CACCCAACTAAAAAA GCGGACCCAA TTAGCT TTAGATCCAC TCCCTATAACATTAT LVIS_1423 1395609 - 1394620 - | Aryl-alcohol dehydrogenase related enzyme TERM 1809 1394878 - 1394866 - G 80 -6.3 -4.68908 | opp_overlap 1394856, overlap 1394862 GTTATCCAAAACAAA TTGGT TTG ACCAA TGAATATCAACGTCA murQ 1396595 - 1395687 - | N-acetylmuramic acid-6-phosphate etherase TERM 1810 1396762 - 1396741 - R 100 -11.5 -5.41143 | opp_overlap 1396741 GAGTGGTCAAAAAAA GCGACCCGC TAAC GCTGGTCGC TTTCAGAAAACTATG TERM 1811 1396741 - 1396762 + r 89 -11.5 -3.54129 | opp_overlap 1396741 GAGTGGTCAAAAAAA GCGACCCGC TAAC GCTGGTCGC TTTCAGAAAACTATG LVIS_1425 1398429 - 1396780 - | ABC-type oligopeptide transport system, periplasmic component LVIS_1426 1399929 - 1398442 - | amidase TERM 1812 1398763 - 1398773 + g 71 -8.2 -3.7732 | ACCCACTTTGGGAGC CGGC CAA GCCG TTGTTGGTGTCAACA LVIS_1427 1400067 - 1400945 + | ABC-type amino acid transport system, periplasmic component LVIS_1428 1400964 - 1401653 + | ABC-type amino acid transport system, permease component TERM 1813 1401702 - 1401669 - T 100 -10.4 -4.65895 | gap 1, opp_overlap 1401669 TCTGTCAGTTAAAAA GGGAACTG-GCCTGT TCACC ACAGGTTCAGTTCCC TTTTTAACTTGCTCA TERM 1814 1401669 - 1401702 + T 100 -12.6 -4.7629 | gap 1, opp_overlap 1401669 TCTGTCAGTTAAAAA GGGAACTGG-CCTGT TCACC ACAGGTTCAGTTCCC TTTTTAACTTGCTCA LVIS_1429 1402407 - 1401715 - | hypothetical protein TERM 1815 1402046 - 1402036 - G 76 -8.2 -3.96624 | overlap 1402037 CATTGCCATCACAAA CGCC AGT GGCG GCGTCACAATCAAAT TERM 1816 1402466 - 1402441 - R 100 -8.3 -5.50723 | gap 1 TCATCAAAATAAAAA CCGCCACCAGCT AGT AGC-GGTAACGG TCAACACCTATTGCT LVIS_1430 1403460 - 1402474 - | phosphoribosylpyrophosphate synthetase LVIS_1431 1406081 - 1403556 - | exonuclease V subunit alpha TERM 1817 1403711 - 1403744 + g 75 -10.3 -3.37796 | gap 1, opp_overlap 1403704, overlap 1403714 1403717 1403741 CCGAAGTATCGGCCA CTGCAACCGGT-GCAG CTA CCGCCACCGGTTGTGG TTGTGCGTCATCAAC TERM 1818 1403714 - 1403741 + g 71 -10.6 -2.85216 | gap 1, opp_overlap 1403704, overlap 1403711 1403717 AAGTATCGGCCACTG CAACCGGT-GCAG CTA CCGCCACCGGTTG TGGTTGTGCGTCATC TERM 1819 1406021 - 1406001 - G 82 -5.3 -5.03715 | overlap 1406003 ATTACTGGCAAAAAA GACCGCACT GAC AGTGCCGAC CACAAAGTCTGGTTG TERM 1820 1406019 - 1406003 - G 71 -6.5 -4.14633 | overlap 1406001 TACTGGCAAAAAAGA CCGCACT GAC AGTGCCG ACCACAAAGTCTGGT LVIS_1432 1406776 - 1406096 - | TPR repeat-containing protein LVIS_1433 1407442 - 1406786 - | phosphoglycerate mutase family protein TERM 1821 1407573 - 1407551 - R 100 -7.1 -5.95539 | TTTCAAATAAAAAAA GCATTGCTA ATTCA TAGCAATAC CCCTTATTTAACTAG LVIS_1434 1408712 - 1407585 - | tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, PP-loop ATPase TERM 1822 1408891 - 1408922 + r 90 -11.7 -3.67342 | opp_overlap 1408891 CCAGATTCAAAAAAA GTAGGCCAAAAAG TCATGT CTTTTCGGCCTAC TTGTCTCATTATTTT TERM 1823 1408922 - 1408891 - R 100 -13.9 -5.50499 | opp_overlap 1408891 CCAGATTCAAAAAAA GTAGGCCAAAAAG TCATGT CTTTTCGGCCTAC TTGTCTCATTATTTT LVIS_1435 1409272 - 1408931 - | hypothetical protein LVIS_1436 1410470 - 1409274 - | cysteine sulfinate desulfinase/cysteine desulfurase LVIS_1437 1411189 - 1410497 - | nucleoside phosphorylase TERM 1824 1410647 - 1410627 - G 83 -11.9 -3.57731 | CGAACGACCACATAA GGCACATCA AAT TGATGCGCC ACTTGGCCGACCGCC TERM 1825 1410837 - 1410863 + g 70 -9.5 -3.13403 | gap 1, opp_overlap 1410837 1410836 1410828, overlap 1410836 TTAGAAGCAATGAAT CGGGCAGGTTGC TGGG GCAAT-TGCCCG TATTCGTAGCCAAAG LVIS_1438 1411508 - 1411212 - | small membrane protein LVIS_1439 1412059 - 1411517 - | NUDIX family hydrolase LVIS_1440 1412285 - 1412061 - | cold shock protein TERM 1826 1412366 - 1412336 - R 89 -7.5 -4.96848 | gap 1, opp_overlap 1412336, overlap 1412318 GTTTTCACACAAAAA CGACAG-TCCCCGG TCTC CCGGAGCGCTGCCG TTTCCTAAAACTTAG LVIS_1441 1415201 - 1412388 - | isoleucyl-tRNA synthetase TERM 1827 1415231 - 1415286 + r 100 -20.6 -2.55015 | AAGTGATGTTTCTCG GTTGGTGAACCGGTGAGCTCAAACCA TGTC TGGTCTCAGCTCACCGGTCCACCAAA TCAATTGCCTAGAAT TERM 1828 1415351 - 1415328 - R 100 -9.6 -5.64421 | opp_overlap 1415328 ATGGCAAACAAAAAA CGACCTCGTC AAGG GACGAAATCG TTCGTGGTACCACCC LVIS_1442 1416263 - 1415553 - | cell division initiation protein LVIS_1443 1417062 - 1416283 - | cell division protein LVIS_1444 1417368 - 1417084 - | cell division membrane protein LVIS_1445 1417812 - 1417381 - | cell division protein TERM 1829 1417853 - 1417881 + r 79 -11.1 -3.18032 | opp_overlap 1417838, overlap 1417851 TTCCAAACGGTTACT TACGCCGCCGTTT GAA AAATGGTGGTGTA TCTTCACTCTTGTTA LVIS_1446 1419107 - 1417848 - | cell division protein FtsZ LVIS_1447 1420457 - 1419129 - | ATPase for cell division LVIS_1448 1421468 - 1420599 - | cell division septal protein TERM 1830 1421357 - 1421382 + g 93 -7.6 -5.19998 | ACCATTTGGGCGTTC GCGCCTGAC-GC TGCT GCTGTC-GGCGC TTTTGTTTTGCTTGT LVIS_1449 1422595 - 1421501 - | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase TERM 1831 1421972 - 1421990 + g 75 -10.2 -3.36273 | opp_overlap 1421971 1421972 ATTAAATTCAGGAAT CGCCGCAA CCG TGGCGGCG TTAATCTTCAAAGCC TERM 1832 1422501 - 1422518 + g 74 -2.7 -5.03145 | gap 1, overlap 1422514 CCAACGTACATCACT GCG-GAAT TCG GTTCGCGC TTTTTTAGCGCCTTG murD 1424019 - 1422595 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 1833 1424059 - 1424027 - R 100 -12.8 -5.14965 | opp_overlap 1424026 ACTTTCACTAAAAAA GGACTAACCGACTC CTAAC GAGCCAGTTAGCCC ATTAGTCGACCAAAA LVIS_1451 1425047 - 1424076 - | UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase TERM 1834 1424682 - 1424672 - G 75 -3.2 -5.11836 | AGACCCAAAACAAAA TGAG GGC CCCA ACGATCTGCCCCAGC LVIS_1452 1427228 - 1425069 - | cell division protein FtsI/penicillin-binding protein 2 TERM 1835 1426782 - 1426804 + g 76 -9.2 -3.84027 | overlap 1426780 AATGTTTTGCCCGGC CGTTCCAAAT TCA ACTTGGAACG TATTCTTTTTGCTAG TERM 1836 1427184 - 1427154 - G 73 -5.5 -4.5115 | gap 1, opp_overlap 1427172 1427175 GAGAAAAATGTAAAA CAGAAACCGACCAA CACT CTTG-CGGTTTCTG CTGGGTTGCTTATTC LVIS_1453 1427623 - 1427228 - | protein required for the initiation of cell division LVIS_1454 1428612 - 1427668 - | SAM-dependent methyltransferase for cell envelope biogenesis LVIS_1455 1429075 - 1428644 - | cell division protein MraZ TERM 1837 1428881 - 1428866 - G 73 -8.2 -3.84674 | AGCGGAGTAGAAGAA CCGGAC AAAG GCCCGG GCATCCTTGCGATTG TERM 1838 1429208 - 1429181 - R 100 -16.4 -5.38249 | opp_overlap 1429185 ACCAACGACAAAAAA GCCATGGCGAAC AGGT GTTCACCATGGC TTAACACGCTTCACA LVIS_1456 1429639 - 1429286 - | hypothetical protein LVIS_1457 1429811 - 1429933 + | hypothetical protein TERM 1839 1429986 - 1429943 - T 100 -18.5 -3.20227 | opp_overlap 1429948, overlap 1429948 GGGTAATTACCAACA CAAAATAGGTGTCAAGTCC GTAAAT GGACTTGACACCTATTTTT ATTTGATCATTGCGT TERM 1840 1429981 - 1429948 - T 100 -18.4 -4.71186 | opp_overlap 1429948, overlap 1429943 ATTACCAACACAAAA TAGGTGTCAAGTCC GTAAAT GGACTTGACACCTA TTTTTATTTGATCAT TERM 1841 1429948 - 1429981 + T 100 -19.1 -5.34309 | opp_overlap 1429948 1429943 ATTACCAACACAAAA TAGGTGTCAAGTCCG TAAA TGGACTTGACACCTA TTTTTATTTGATCAT LVIS_1458 1432338 - 1429993 - | DNA segregation ATPase FtsK/SpoIIIE related protein TERM 1842 1432307 - 1432319 + g 74 -2.6 -5.01811 | TTGCGCTTAGTTGGG CGCC GGCGG GGTG TTTTTCGTTTCGTAG LVIS_1459 1432869 - 1432357 - | rRNA methylase (SpoU class) TERM 1843 1433034 - 1433001 - R 100 -8.1 -5.63504 | opp_overlap 1433001 1433004 AATGGGACAAAAAAA GCAGCTCCTCGGTGT GGGC ACGGCGAGGAACTAC TTTAGTGAAGTGCTA LVIS_1460 1434023 - 1433169 - | SAM-dependent methyltransferase LVIS_1461 1435197 - 1434010 - | permease LVIS_1462 1435296 - 1435919 + | copper resistance protein TERM 1844 1435968 - 1435934 - T 100 -13 -5.19212 | opp_overlap 1435934 ATCACTATCAAAAAA CTGTGAAAGATTGCCA AAT CAGCCATCTTTCACAG TTTTTCTTATTAATG TERM 1845 1435934 - 1435968 + T 100 -11.6 -5.31855 | opp_overlap 1435934 ATCACTATCAAAAAA CTGTGAAAGATTGC CAAATCA GCCATCTTTCACAG TTTTTCTTATTAATG LVIS_1464 1437756 - 1436251 - | glycosyltransferase LVIS_1465 1439308 - 1437785 - | glycosyltransferase TERM 1846 1437844 - 1437865 + g 72 -10.9 -2.56914 | TACGGCGAGTCCATC GCGTATGCG CTGA CGTATACGC TGCCTTGCTAAAGTC TERM 1847 1438699 - 1438685 - G 85 -5.7 -5.06414 | opp_overlap 1438684 TTCTTTTAAGAAAAA GACGA ACAGA TCGTC ACTGTTTTGGAAGAA LVIS_1466 1439548 - 1439342 - | hypothetical protein LVIS_1467 1439920 - 1439564 - | hypothetical protein LVIS_1468 1440346 - 1439981 - | hypothetical protein TERM 1848 1440285 - 1440299 + g 74 -10 -3.5782 | opp_overlap 1440283 GCCAAAATAAGCATT GCTTGG GCG CCAAGC TTAATTTCATCGGTT LVIS_1469 1440758 - 1440369 - | hypothetical protein TERM 1849 1441289 - 1441254 - R 82 -10.5 -3.58209 | overlap 1441252 1441260 ATCAACCCATAAACA CGAAAATGGCCACGC AATTAA GCATGACCTTTTTCG CTAGTAGCTCACTGA LVIS_1470 1441356 - 1441240 - | hypothetical protein LVIS_1471 1442347 - 1441448 - | pseudouridylate synthase, 23S RNA-specific TERM 1850 1441556 - 1441541 - G 87 -6.8 -5.03747 | overlap 1441542 AAATGGCTGAAAAAA CTGCAC GCGG GCGCAG TGCAACGCTTGTCGC TERM 1851 1442313 - 1442265 - G 77 -3.9 -5.00884 | gap 3, opp_overlap 1442265 ACCTGTTTTAAAAAA GTCCGCGTGACAC-CGTGGGCCAT TAAC ACGGTCCGCACGTG-CACG-GGAC TTTCACCAGTGACTT ppnK 1443147 - 1442344 - | inorganic polyphosphate/ATP-NAD kinase LVIS_1473 1443808 - 1443149 - | RelA_SpoT domain-containing protein TERM 1852 1443276 - 1443296 + g 75 -11.9 -2.53213 | opp_overlap 1443270 1443269 AGCTTAAACGCTGCT TCGGCTGCA CGC TGCAGTCGA TCACTTAACGCCTTA LVIS_1474 1444122 - 1444760 + | dithiol-disulfide isomerase TERM 1853 1444775 - 1444806 + F 100 -12.4 -5.52384 | opp_overlap 1444772 AGTTTAATCAATGCT CACCACTAGCTATT ACCA GACAGCTAGTGGTG TTTTTTTGGTCAAAA LVIS_1475 1444923 - 1445786 + | hypothetical protein TERM 1854 1445829 - 1445798 - T 100 -15.3 -4.59853 | opp_overlap 1445798 TTAACCGTTTAAAAA GCACGACCCATTC TGATTT GAATGAGTCGTGC TTTTTAGTGCATTCT TERM 1855 1445798 - 1445829 + T 100 -13.1 -4.77759 | opp_overlap 1445798 TTAACCGTTTAAAAA GCACGACCCATTC TGATTT GAATGAGTCGTGC TTTTTAGTGCATTCT LVIS_1476 1447650 - 1445845 - | oligoendopeptidase F LVIS_1477 1448811 - 1447717 - | competence protein TERM 1856 1448224 - 1448243 + g 73 -7.8 -3.98282 | opp_overlap 1448222 1448226 TGCTACTAACTCAGA CAGCGTCG TTAC CCACGCTG TTTCATTAATGTAAG TERM 1857 1448924 - 1448903 - R 100 -10.1 -5.10064 | TTGAAGACACAAAAA GTCCGGGCC ATTT GACCCGAAC TTCCACTTAAATATT LVIS_1478 1449585 - 1448938 - | S-adenosylmethionine-dependent methyltransferase TERM 1858 1449555 - 1449567 + g 75 -7.7 -4.20516 | GATCGGCCATATAGC CCTTG GCC CAAGG TTTATTGCGTACACG TERM 1859 1449606 - 1449643 + r 86 -8.1 -4.70583 | opp_overlap 1449609, overlap 1449607 1449608 ATTTCCTCCTTAGCA CAACGGCGGGCGCGAGG TTTG CCCCGCTCCCGCCGCCA TTTTGTGTTAATCAG TERM 1860 1449607 - 1449642 + r 89 -11.6 -3.41627 | opp_overlap 1449609, overlap 1449606 1449608 TTTCCTCCTTAGCAC AACGGCGGGCGCGAGG TTTG CCCCGCTCCCGCCGCC ATTTTGTGTTAATCA TERM 1861 1449608 - 1449641 + r 100 -15.1 -2.64253 | opp_overlap 1449609, overlap 1449607 1449606 TTCCTCCTTAGCACA ACGGCGGGCGCGAGG TTTG CCCCGCTCCCGCCGC CATTTTGTGTTAATC TERM 1862 1449640 - 1449609 - R 100 -20.8 -3.40403 | opp_overlap 1449608 1449607 1449606 TCCTCCTTAGCACAA CGGCGGGCGCGAGG TTTG CCCCGCTCCCGCCG CCATTTTGTGTTAAT TERM 1863 1449662 - 1449677 + r 71 -4.7 -4.62336 | overlap 1449647 TGTGTTAATCAGTCA CTGAC TCACGC GTCAG TTTTTCCAGTAAAAT LVIS_1479 1450442 - 1449651 - | choline kinase-like enzyme TERM 1864 1449893 - 1449883 - G 74 -6.8 -4.34402 | GCGCCGAGATCAAAA GCTG GAT CAGC GAAAGTTGCGGCATC TERM 1865 1450180 - 1450190 + g 71 -8.2 -3.63073 | opp_overlap 1450179 1450180 ACGCGATGTAATAAC CGGG CAA CCCG TTGTTCGCGCATCTC LVIS_1480 1451730 - 1450504 - | ABC transporter permease LVIS_1481 1452461 - 1451727 - | ABC-type multidrug transport system, ATPase component TERM 1866 1452870 - 1452881 + G 73 -2.2 -5.03145 | CCTACGATGCTGATT TAGC GGCA GCTG TTTTTTCACGGATTC LVIS_1482 1452671 - 1453129 + | diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases LVIS_1483 1453132 - 1453452 + | hypothetical protein prsA 1453565 - 1454482 + | peptidylprolyl isomerase TERM 1867 1454502 - 1454530 + T 100 -16.1 -4.98522 | opp_overlap 1454502 ATTAATCGCCAAAAA CGCTCAACGACCA GTA TCGTCGTTGAGCG TTTTTGTGTGCCATT TERM 1868 1454530 - 1454502 - T 100 -16.1 -4.62872 | opp_overlap 1454502 ATTAATCGCCAAAAA CGCTCAACGACCA GTA TCGTCGTTGAGCG TTTTTGTGTGCCATT LVIS_1485 1455520 - 1454546 - | HD-superfamily hydrolase LVIS_1486 1458157 - 1455533 - | DNA repair ATPase TERM 1869 1457076 - 1457066 - G 77 -4.6 -4.86731 | opp_overlap 1457066 CGTTGCCAAAGAAAA CGCC CGT GGCA TTTGACCATCTTGCG LVIS_1487 1459361 - 1458147 - | DNA repair exonuclease TERM 1870 1458346 - 1458381 + g 90 -12.6 -3.74693 | opp_overlap 1458345, overlap 1458347 TATTGTTGATCCAAT TGTGGTGCTGTCAGAG TTGA CTCTGGCAACGCCACG TTTAATCGAATGAAG TERM 1871 1458347 - 1458380 + g 88 -13.9 -2.84602 | opp_overlap 1458345, overlap 1458346 ATTGTTGATCCAATT GTGGTGCTGTCAGAG TTGA CTCTGGCAACGCCAC GTTTAATCGAATGAA TERM 1872 1459430 - 1459395 - R 87 -4.6 -5.52384 | CTGTGATTAAAAAAA GTCGACCTAACCACCC AAAT GAGCAGCCACGCCGAC AATCTCTACTTAACC LVIS_1488 1459789 - 1459445 - | hypothetical protein LVIS_1489 1461976 - 1459880 - | membrane carboxypeptidase (penicillin-binding protein) TERM 1873 1462132 - 1462101 - R 86 -3.1 -5.67967 | gap 1 ATTACGATAAAAAAA GAACATGTC-CAGC TAGGC GCCATGACATATTC TATCAACAATTAGTG LVIS_1490 1462609 - 1462142 - | arginine repressor TERM 1874 1462806 - 1462783 - R 100 -11.8 -5.14563 | opp_overlap 1462783 1462782 1462785 GTGCCCACCAAAAAA GACCCAAGAC GTTT GTCTTGAGTC ATTCATTGCCTAACG LVIS_1491 1464535 - 1462844 - | arginyl-tRNA synthetase TERM 1875 1464646 - 1464617 - R 100 -10.1 -5.7946 | overlap 1464645 CCGGGAACAAAAAAA CGCCCCTTACAAA AATA CTTGTAAGAGACG AGATTACCCGCGGTA TERM 1876 1464847 - 1464829 - R 100 -8.8 -4.57882 | opp_overlap 1464829 TCGAATAATAAGAAA GACGACCA TGT TGGCCGCC TACATTCGAAAGCGG TERM 1877 1465007 - 1464995 - R 74 -4.9 -4.88295 | overlap 1464987 AAATAAATTCAAAAA GTTTT TAA AAAAC TAGGGTCCGTCTGAA LVIS_1493 1465456 - 1465025 - | transposase LVIS_1494 1465800 - 1465429 - | transposase TERM 1878 1465576 - 1465563 - GR 71 -3.1 -4.87786 | TCAATTCGAGAAAAA CCTGT TCGA ACAAG CCTGAACTTACCCAG LVIS_1495 1466083 - 1465862 - | hypothetical protein TERM 1879 1466192 - 1466180 - H 80 -6.3 -4.85433 | ACACAAATGTAAAAA GTTTG AAA CAAAC GAGTAAACGCGAACT LVIS_1496 1466417 - 1467676 + | N-acetylmuramoyl-L-alanine amidase TERM 1880 1467689 - 1467711 + F 100 -15.6 -5.40474 | TAATGCCCACTTTAA CGCTGCTCCG AAT TGGAGCAGCG TTTTTTTGAAAGGAT LVIS_1497 1467737 - 1468270 + | dihydrofolate reductase LVIS_1498 1468337 - 1468678 + | hypothetical protein TERM 1881 1468726 - 1468686 - T 100 -13.5 -3.35358 | opp_overlap 1468686, overlap 1468679 TTAAATAATTATTAA TATCCCTTCTCAACAGCCA TCA TTAATGTTGAGAAGGGATA TTTTTATATAAAAGT TERM 1882 1468686 - 1468726 + T 100 -12.9 -4.9725 | opp_overlap 1468679 1468686 TTAAATAATTATTAA TATCCCTTCTCAACA GCCATCATTAA TGTTGAGAAGGGATA TTTTTATATAAAAGT TERM 1883 1468867 - 1468842 - T 100 -10.5 -5.89921 | ATTATAATAAAAAAA GTGACTCCTCT AAAA AGAGAAGCCAC TCAAGACCATCATTT LVIS_1499 1469605 - 1468892 - | aspartate racemase LVIS_1500 1470868 - 1469612 - | ATP-grasp protein TERM 1884 1470965 - 1470918 - R 86 -10 -3.99779 | opp_overlap 1470920 1470923 1470927, overlap 1470920 1470923 TAAAAGCTAAGTAAA CACAATCAAGGTTGTTAGCGGA CGAG TCCAATAGCAACCTTGATCGTT ATCGGCCGACCAAAT TERM 1885 1470963 - 1470920 - R 100 -12.6 -3.57278 | opp_overlap 1470920 1470923 1470927, overlap 1470918 1470923 AAAGCTAAGTAAACA CAATCAAGGTTGTTAGCGGA CGAG TCCAATAGCAACCTTGATCG TTATCGGCCGACCAA TERM 1886 1470920 - 1470963 + r 78 -10.4 -3.28712 | opp_overlap 1470918 1470920 1470923, overlap 1470923 1470927 AAAGCTAAGTAAACA CAATCAAGGTTGTTAGCGGA CGAG TCCAATAGCAACCTTGATCG TTATCGGCCGACCAA TERM 1887 1470923 - 1470960 + r 77 -10.7 -2.82623 | opp_overlap 1470920 1470918 1470923, overlap 1470920 1470927 GCTAAGTAAACACAA TCAAGGTTGTTAGCGGA CGAG TCCAATAGCAACCTTGA TCGTTATCGGCCGAC TERM 1888 1470960 - 1470923 - R 88 -10.7 -3.90298 | opp_overlap 1470923 1470920 1470927, overlap 1470920 1470918 GCTAAGTAAACACAA TCAAGGTTGTTAGCGGA CGAG TCCAATAGCAACCTTGA TCGTTATCGGCCGAC LVIS_1501 1472886 - 1471003 - | asparagine synthase (glutamine-hydrolyzing) TERM 1889 1471250 - 1471264 + g 91 -10 -4.56736 | CAAGTCGCAATCGGA GATGGG AAT CCCATC TTTTCCTTCTTAGCT LVIS_1502 1473728 - 1473030 - | Crp-like transcriptional regulator LVIS_1503 1473867 - 1475276 + | dipeptidase LVIS_1504 1475346 - 1475582 + | hypothetical protein TERM 1890 1475613 - 1475642 + T 100 -14.3 -5.37345 | opp_overlap 1475613 CTTAGCTCCTTTAAA GACCCGCGATTGG TAAA CAGATCGCGGGTC TTTTTTGTCGTTGCC TERM 1891 1475642 - 1475613 - T 100 -13 -3.53811 | gap 1, opp_overlap 1475613 CTTAGCTCCTTTAAA GACCCGCGAT-TG GTAAA CAGATCGCGGGTC TTTTTTGTCGTTGCC TERM 1892 1475714 - 1475689 - T 100 -8.3 -5.07107 | TAAACCCGCAAAAAA GGCGTTGATCA ATTA TCACCAACGCC TACTCAACACATTCC LVIS_1505 1477532 - 1475730 - | hypothetical protein TERM 1893 1475887 - 1475922 + g 100 -10.5 -4.57073 | GCACTAAGCACAGTT TGATCGGTTGGCGAT AGCTGA ACCGCCGACTGATCA TTTTTAAACCACATG TERM 1894 1478010 - 1477988 - R 100 -10.6 -4.6856 | opp_overlap 1477988 GAAAGACGTCAAAAA GCCCCGCTTA AAG TAAGCAGAGC TAATATAACAACCAT LVIS_1506 1478335 - 1478084 - | hypothetical protein TERM 1895 1478391 - 1478377 - R 74 -4.3 -4.96646 | opp_overlap 1478389, overlap 1478389 TTATACAACTAAAAA TCGTT GAAAT AACGA ACATTTTCGGTGTTT TERM 1896 1478478 - 1478447 - R 90 -7.4 -5.08824 | opp_overlap 1478447 1478451 TTTTTATGTAAAAAA TGAGCGAAACTGAC TCCA ATCAATTTCGTTCA TCCTTAAGAAGTAAT LVIS_1507 1478664 - 1478512 - | hypothetical protein LVIS_1508 1481581 - 1479071 - | excinuclease ATPase subunit TERM 1897 1480394 - 1480410 + g 85 -12.3 -3.31322 | GTACAGAACTCCCGT CGTTGCG CTT CGCAACG TTCTGCCCAGTTGAA TERM 1898 1481539 - 1481551 + g 80 -9.1 -4.16182 | TTAAATTATTCACCC GTGCG CCA CGCAC TTTAATTTCTGCTGG TERM 1899 1481652 - 1481640 - R 74 -4.7 -4.90869 | opp_overlap 1481651 ACCACGAATCAAAAA GAGGG AGT CCCGC AGTTCTCTGCTTAAC TERM 1900 1481799 - 1481831 + r 100 -7.8 -5.3104 | TTATTACGCTGCTAA GGTATGTTCTCG ATATTCACA CGGGGACATACC TTTTGTTTTTGATGA LVIS_1509 1482440 - 1481787 - | transposase TERM 1901 1482493 - 1482448 - R 100 -13.6 -5.2189 | opp_overlap 1482448 1482472 1482483, overlap 1482483 TTAACCATGAAAAAA GTACCTCACAATCGTTAGAC TTCTTT GTCTAACAATTATGAAGCAC TTCAATGCTTCTAAG TERM 1902 1482531 - 1482568 + r 71 -4.2 -4.79657 | opp_overlap 1482534, overlap 1482533 1482534 TTTTTTGATTGTAAA AAAGAACACCGCTAAA CGTTGA TTTAGCAGTGTTCCTC TTTTATTACTATTAT TERM 1903 1482565 - 1482534 - R 100 -13.2 -5.0538 | opp_overlap 1482534 1482533 1482531 TTTGATTGTAAAAAA GAACACCGCTAAAC GTTG ATTTAGCAGTGTTC CTCTTTTATTACTAT TERM 1904 1482534 - 1482565 + r 76 -10.3 -2.98327 | opp_overlap 1482534, overlap 1482533 1482531 TTTGATTGTAAAAAA GAACACCGCTAAA CGTTGA TTTAGCAGTGTTC CTCTTTTATTACTAT TERM 1905 1482699 - 1482726 + r 100 -6.4 -5.83822 | gap 1, opp_overlap 1482697 1482699 TATATTACACTAAGA CTGCATAAAAGGG AAG CCCTTT-ATTCAG TTTTTTTTACGTCTG LVIS_1511 1483012 - 1482719 - | hypothetical protein LVIS_1512 1483470 - 1483003 - | glycopeptide antibiotics resistance protein LVIS_1513 1484077 - 1484553 + | transcriptional regulator TERM 1906 1484569 - 1484598 + T 100 -12.9 -4.93696 | opp_overlap 1484569 TATTTTTTATAAAAA GACAGCACGGACG ATAT TGTCAGTGCTGTC TTTTTACTATTTAAG TERM 1907 1484598 - 1484569 - T 100 -12.2 -4.83615 | opp_overlap 1484569 TATTTTTTATAAAAA GACAGCACGGAC GATATT GTCAGTGCTGTC TTTTTACTATTTAAG LVIS_1514 1485285 - 1484605 - | metal-dependent membrane protease TERM 1908 1485583 - 1485606 + r 100 -11.8 -5.71983 | TAACCTTACTCTTTG GCCATTGCGA CTTA TCGTAATGGC TTTTTTTGTGCTTCC LVIS_1515 1485839 - 1485594 - | hypothetical protein TERM 1909 1485768 - 1485751 - G 71 -6.3 -4.19258 | gap 1, overlap 1485752 ATATCCCAGCCAAAA GC-CACGT TCC ACGTGAGC ATCCCCCACAAGGTA LVIS_1516 1485989 - 1486951 + | lactate dehydrogenase related enzyme TERM 1910 1486984 - 1486962 - f 72 -9.2 -3.2048 | opp_overlap 1486962 CTTAAACGTCAGTAA CACTCAAGTT CAC AGCTTGAGTG TTTTTTTATGGATCA TERM 1911 1486962 - 1486984 + F 100 -11.4 -5.64274 | opp_overlap 1486962 CTTAAACGTCAGTAA CACTCAAGTT CAC AGCTTGAGTG TTTTTTTATGGATCA LVIS_1517 1487171 - 1489885 + | trehalose and maltose hydrolase ( phosphorylase) TERM 1912 1490162 - 1490146 - g 71 -2.9 -4.88067 | overlap 1490149 1490155 AGCCACTCAGAAAAA CACCAAC TAT GTCGCTG AAGTCGACAAGATGA LVIS_1518 1489898 - 1490569 + | HAD family sugar phosphatase TERM 1913 1490577 - 1490621 + T 100 -16 -3.71686 | opp_overlap 1490587, overlap 1490587 TAGACTAAATTCATC AATACAAAAAGGGATTGAGC AAATC GCTCAGTCCCTTTTTGTGTG TTCTATTGAATTAAA TERM 1914 1490587 - 1490611 + T 100 -12.2 -5.12474 | opp_overlap 1490587, overlap 1490577 TCATCAATACAAAAA GGGATTGAGC AAATC GCTCAGTCCC TTTTTGTGTGTTCTA TERM 1915 1490611 - 1490587 - T 100 -10.7 -5.1244 | opp_overlap 1490577 1490587 TCATCAATACAAAAA GGGATTGAGCA AAT CGCTCAGTCCC TTTTTGTGTGTTCTA LVIS_1519 1491394 - 1490624 - | HAD superfamily hydrolase LVIS_1520 1491548 - 1492195 + | deoxynucleoside kinase TERM 1916 1492207 - 1492238 + T 100 -14.7 -5.27779 | opp_overlap 1492207 TTAAACATAAAAAAA GAACTGTGAAATC ATCATA GATTTCACAGTTC TTTTTTAGTGTTCAG TERM 1917 1492238 - 1492207 - T 100 -14.7 -5.88197 | opp_overlap 1492207 TTAAACATAAAAAAA GAACTGTGAAATC ATCATA GATTTCACAGTTC TTTTTTAGTGTTCAG LVIS_1521 1492569 - 1492243 - | hypothetical protein LVIS_1522 1494118 - 1492643 - | major facilitator superfamily permease TERM 1918 1494306 - 1494276 - R 100 -12.7 -4.78107 | gap 1, opp_overlap 1494274 1494272 1494276 CAGCACGACGAAAAA CGGCTAGACCGCTC AACC GAGCG-TCTAACCG TCTAATTTTTAACTT TERM 1919 1494276 - 1494306 + r 77 -10.5 -3.19705 | gap 1, opp_overlap 1494276, overlap 1494274 1494272 CAGCACGACGAAAAA CGGCTAGACCGCTC AACC GAGCG-TCTAACCG TCTAATTTTTAACTT LVIS_1523 1495511 - 1494324 - | S-adenosylmethionine synthetase LVIS_1524 1495755 - 1496462 + | hypothetical protein LVIS_1525 1496569 - 1496931 + | hypothetical protein TERM 1920 1496942 - 1496911 - T 78 -2.3 -5.54885 | opp_overlap 1496911, overlap 1496914 AACACCAATAAAAAA GATGTCCAATCAT TTAGTT AAGATTGAACGTC TTTTTTATTTCCTGA TERM 1921 1496911 - 1496942 + T 82 -2.3 -5.68438 | opp_overlap 1496911 1496914 AACACCAATAAAAAA GATGTCCAATCAT TTAGTT AAGATTGAACGTC TTTTTTATTTCCTGA LVIS_1526 1497528 - 1496959 - | hypothetical protein LVIS_1527 1497735 - 1498058 + | hypothetical protein TERM 1922 1498160 - 1498127 - f 100 -18.4 -5.02476 | opp_overlap 1498127 ATAGTTTTCAAAAAA CTGACGCTGTGATT GGCAAT AATCACAGCGTCAG TTTTTTTAAAATTAA TERM 1923 1498127 - 1498160 + F 100 -19.1 -5.47399 | opp_overlap 1498127 ATAGTTTTCAAAAAA CTGACGCTGTGATTG GCAA TAATCACAGCGTCAG TTTTTTTAAAATTAA LVIS_1528 1498430 - 1498999 + | Zn-dependent protease TERM 1924 1499036 - 1499059 + F 100 -13.2 -5.14563 | opp_overlap 1499036 ACGAATACCTATAAA TCCCCTAGCT GAAT AGCTGGGGGA TTTTTTCATCAAGCG TERM 1925 1499059 - 1499036 - f 90 -11 -3.98172 | opp_overlap 1499036 ACGAATACCTATAAA TCCCCTAGCT GAAT AGCTGGGGGA TTTTTTCATCAAGCG TERM 1926 1499330 - 1499319 - g 78 -5.8 -4.7497 | CCTATGCAGCAAAAA TGGC AACA GCCA GCCATAAAACTCTAT LVIS_1529 1499237 - 1499704 + | UspA family nucleotide-binding protein TERM 1927 1499874 - 1499904 + T 100 -12 -4.82901 | TTCTCATGCTATTTT TGATGTTGACGAAT AGT GTCCGTCAACATCA TTTTTGTGCAGCGGC TERM 1928 1500074 - 1500054 - T 100 -11.2 -5.33785 | opp_overlap 1500054 AAGGATTACAAAAAA GTCATCGC CGATT GCGATGAC TTCTGAGATGAAGCT TERM 1929 1500054 - 1500074 + T 81 -11.2 -3.32963 | opp_overlap 1500054 AAGGATTACAAAAAA GTCATCGC CGATT GCGATGAC TTCTGAGATGAAGCT TERM 1930 1501780 - 1501796 + T 70 -5.1 -4.4715 | opp_overlap 1501777, overlap 1501761 GGGGGAGATAAGCCT GTTATCC CCA GGGTAGC TTTTATCCGTTGAGC TERM 1931 1504421 - 1504396 - T 74 -6.1 -4.56978 | overlap 1504397 TTTTCAAAGAACAAA TTCCTTGGCAC TCTC GTGCCAATGGA GAATAGCGGGATCGA TERM 1932 1504421 - 1504397 - T 74 -9.4 -3.33464 | gap 1, overlap 1504396 TTTCAAAGAACAAAT TCC-TTGGCAC TCTC GTGCCAATGGA GAATAGCGGGATCGA TERM 1933 1504448 - 1504464 + T 76 -10.9 -2.64243 | TCGAACCGCTGACCC CCTGCTT GCA AAGCAGG TGCTCTCCCATCTGA TERM 1934 1506034 - 1506015 - T 76 -9.4 -3.5594 | opp_overlap 1506015 AAGCCACCTTTCAAA CAAAATCC ATGC GGATTTTG TTGTTATACGGTATT TERM 1935 1506015 - 1506034 + T 81 -9.4 -3.81848 | opp_overlap 1506015 AAGCCACCTTTCAAA CAAAATCC ATGC GGATTTTG TTGTTATACGGTATT TERM 1936 1506243 - 1506224 - T 70 -7.2 -3.79747 | overlap 1506225 TGAGCCAGGATCAAA CTCTCATC TTAT GATGAGAA CTTAAGTAAGCTCAT TERM 1937 1506758 - 1506722 - T 91 -7.4 -5.37345 | opp_overlap 1506713 CTTAACTACAAAAAA GGTAATGCAACAGCAA AGTTA CCGCCATTACATTACC TTTTTTCTACTTTAA LVIS_1546 1508822 - 1506765 - | phosphoglycerol transferase/alkaline phosphatase superfamily protein TERM 1938 1507410 - 1507421 + g 73 -2.2 -5.05782 | AATCATACTATTCTT GTAG AGAC CTGC TTTTTTGAGATACGT TERM 1939 1508827 - 1508814 - G 71 -3.1 -5.00616 | gap 1, overlap 1508815 1508816 CCTTCGCTTAAAAAA GTTCGC CAT GCGA-C TGCCTCCACAAAATA TERM 1940 1508934 - 1508958 + r 80 -10.2 -3.45945 | opp_overlap 1508934, overlap 1508939 TCATCGAAAAAAAAA CAAAACTATG TCACC CATAGTTTTG TTAGTTATCCGTCAG TERM 1941 1508958 - 1508934 - R 100 -10.2 -6.11644 | opp_overlap 1508934 1508939 TCATCGAAAAAAAAA CAAAACTATG TCACC CATAGTTTTG TTAGTTATCCGTCAG TERM 1942 1508939 - 1508953 + r 71 -4.3 -4.81852 | opp_overlap 1508934, overlap 1508934 GAAAAAAAAACAAAA CTATG TCACC CATAG TTTTGTTAGTTATCC LVIS_1547 1509195 - 1508959 - | hypothetical protein LVIS_1548 1510307 - 1509273 - | integral membrane protein LVIS_1549 1511334 - 1510312 - | glycosyltransferase TERM 1943 1510676 - 1510693 + g 71 -4.1 -4.74103 | AAGCTCAAGTTAGCA GGTGG GTTATCGA CCACC TTTTTGAGTTCGGCA LVIS_1550 1512525 - 1511347 - | glycosyltransferase TERM 1944 1512694 - 1512654 - R 100 -10.6 -5.67063 | gap 1 CTGATTATAAAAAAA GACGTTTGACATGCCCTTA GTCA TCAGGTCATG-CAAACGTC CCATCATCATTTCAT LVIS_1551 1514446 - 1512710 - | phosphoenolpyruvate-protein kinase TERM 1945 1514216 - 1514267 + g 91 -14.6 -3.19482 | gap 1, opp_overlap 1514217 1514230, overlap 1514217 1514230 CTGGAGCATGGCAAT ATGGGC-ACTAAAAACCTGGGCACT ATC AGCGCCCAGGTTTTTAGTTGCACGA GTTTTAATCATCTCA TERM 1946 1514266 - 1514217 - G 100 -18.1 -3.07043 | gap 1, opp_overlap 1514217 1514216 1514230, overlap 1514230 TGGAGCATGGCAATA TGGGC-ACTAAAAACCTGGGCACT ATC AGCGCCCAGGTTTTTAGTTGCACG AGTTTTAATCATCTC TERM 1947 1514217 - 1514266 + g 100 -18.1 -2.51207 | gap 1, opp_overlap 1514217 1514230, overlap 1514216 1514230 TGGAGCATGGCAATA TGGGC-ACTAAAAACCTGGGCACT ATC AGCGCCCAGGTTTTTAGTTGCACG AGTTTTAATCATCTC TERM 1948 1514252 - 1514230 - G 100 -15.6 -4.72986 | opp_overlap 1514217 1514216 1514230, overlap 1514217 TATGGGCACTAAAAA CCTGGGCACT ATC AGCGCCCAGG TTTTTAGTTGCACGA TERM 1949 1514230 - 1514252 + g 100 -13.4 -4.8622 | opp_overlap 1514230 1514217, overlap 1514217 1514216 TATGGGCACTAAAAA CCTGGGCACT ATC AGCGCCCAGG TTTTTAGTTGCACGA LVIS_1552 1514712 - 1514446 - | phosphocarrier protein HPr LVIS_1553 1515080 - 1514880 - | hypothetical protein LVIS_1554 1515380 - 1517617 + | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones TERM 1950 1517633 - 1517658 + F 100 -12.7 -5.12474 | opp_overlap 1517633 TTAAATTGATAAAAA CACGATGATCG TCAC TGATCATCGTG TTTTTGTGTCTTGTC TERM 1951 1517658 - 1517633 - f 100 -12 -4.94992 | opp_overlap 1517633 TTAAATTGATAAAAA CACGATGATC GTCACT GATCATCGTG TTTTTGTGTCTTGTC TERM 1952 1518317 - 1518335 + G 93 -11.8 -4.35992 | overlap 1518314 CAACGAGGGGCTTTT TCTGACCA AAC TGGTCAGA TTGTTTATTATTATC LVIS_1555 1517762 - 1518841 + | hypothetical protein TERM 1953 1518852 - 1518878 + T 100 -13.8 -5.18357 | opp_overlap 1518852 TTTAAACAGGCAAAA GCTCCCACTAGA CAG TCTAGTAGGAGC TTTTTTAATGGATTA TERM 1954 1518878 - 1518852 - T 100 -16 -4.323 | opp_overlap 1518852 TTTAAACAGGCAAAA GCTCCCACTAGA CAG TCTAGTAGGAGC TTTTTTAATGGATTA LVIS_1556 1521497 - 1518891 - | cation transport ATPase TERM 1955 1519703 - 1519717 + g 73 -7.1 -4.25566 | CATTCACCCCATCTC CGGTC ATGGC GACCG TTTTCCCTGCTTGTT TERM 1956 1520259 - 1520284 + g 75 -3.2 -5.04987 | gap 1, opp_overlap 1520259 TTTGGTCGAGTCAAA CGGATCTTCCG CAACT CGGG-GAGCCG TTTTTTCAAACTGTT TERM 1957 1521723 - 1521750 + r 93 -11.2 -4.08767 | opp_overlap 1521723 TTTGGTAACGCAAAA CGAGCCCGAGAC TTCT GTCCCCGGCTCG TTTTAAGGCGATAAA TERM 1958 1521750 - 1521723 - R 100 -13.4 -4.27316 | opp_overlap 1521723 TTTGGTAACGCAAAA CGAGCCCGAGAC TTCT GTCCCCGGCTCG TTTTAAGGCGATAAA LVIS_1557 1523214 - 1521781 - | dipeptidase TERM 1959 1523327 - 1523311 - H 78 -2.3 -5.52384 | opp_overlap 1523318, overlap 1523313 1523318 GTTCTAGCAAAAAAA TGTGAAA CTT TTTCAAA AGTGTTGACTTTTTC LVIS_1558 1523441 - 1524793 + | NAD(FAD)-dependent dehydrogenase TERM 1960 1524840 - 1524885 + T 100 -12.7 -5.36441 | opp_overlap 1524843, overlap 1524843 ATTTGAATCACAATT AAAGAGGCCTTCCCACGGA ATTCAACG TTCGTGAGAAGGCCTCTTA TTTTTTCTATACGCG TERM 1961 1524843 - 1524882 + T 100 -14.4 -4.77122 | opp_overlap 1524843, overlap 1524840 TGAATCACAATTAAA GAGGCCTTCCCACGGA ATTCAACG TTCGTGAGAAGGCCTC TTATTTTTTCTATAC TERM 1962 1524882 - 1524843 - T 100 -14.4 -4.04295 | opp_overlap 1524843 1524840 TGAATCACAATTAAA GAGGCCTTCCCACGGA ATTCAACG TTCGTGAGAAGGCCTC TTATTTTTTCTATAC LVIS_1560 1527051 - 1525540 - | hypothetical protein TERM 1963 1527268 - 1527240 - R 100 -12.6 -5.79526 | gap 1, opp_overlap 1527239 1527236 ACATGGCAAAAAAAA TACCCCGGATCTG CTTG CA-ATCCGGGGTA GTACTTATTTAAACT prfC 1528862 - 1527285 - | peptide chain release factor 3 LVIS_1562 1529043 - 1529591 + | hypothetical protein TERM 1964 1529599 - 1529636 + T 100 -15.5 -4.73864 | opp_overlap 1529599 ACAATTAAGGTCAAA GCCGCATCGCCTCGGGA AGAC TCCCGTAGCAATGCGGC TTTTGTGTTAATTAC TERM 1965 1529636 - 1529599 - T 100 -19.9 -3.69836 | opp_overlap 1529599 ACAATTAAGGTCAAA GCCGCATCGCCTCGGGA AGAC TCCCGTAGCAATGCGGC TTTTGTGTTAATTAC LVIS_1563 1531668 - 1529644 - | glycosyl/glycerophosphate transferase TERM 1966 1531214 - 1531237 + g 74 -11.2 -3.07005 | TGATTGATTTGACTC TGACCAATTA CCTG TAATTGGTCA TCTTGCAAGTTGATT LVIS_1564 1532567 - 1531683 - | hypothetical protein TERM 1967 1532623 - 1532603 - R 100 -10.5 -5.5112 | opp_overlap 1532603, overlap 1532592 CTCACTAAGAAAAAA TCCCTAGTC ATC GACTAAGGA TTTTTACGGTTACTC TERM 1968 1532603 - 1532623 + r 91 -8.3 -4.67904 | opp_overlap 1532592 1532603 CTCACTAAGAAAAAA TCCCTAGTC ATC GACTAAGGA TTTTTACGGTTACTC LVIS_1565 1533049 - 1532633 - | cytidylyltransferase LVIS_1566 1534309 - 1533167 - | permease TERM 1969 1534361 - 1534335 - R 91 -7.3 -5.40072 | gap 1, overlap 1534315 CTTTCTTTAAAAAAA GGAGCTAG-CCA CAAA TGGACTTGCTCC TGGTGGTACGGAAGA LVIS_1567 1534940 - 1534383 - | hypothetical protein TERM 1970 1535281 - 1535269 - g 71 -9.1 -3.47896 | opp_overlap 1535276, overlap 1535265 GAAGCAACCAAGCAA CGGCA CAT TGCCG ACATGCGCCAAATTT LVIS_1568 1535104 - 1535349 + | hypothetical protein TERM 1971 1535403 - 1535364 - T 91 -7.8 -4.83593 | opp_overlap 1535365, overlap 1535365 AATAACCACCAAAAA GCCCAACACCCGCAGAAA GTAT TATCTGTGGATGCTGGGT TTGCTATTATAACGA TERM 1972 1535365 - 1535402 + T 80 -9.1 -3.97088 | opp_overlap 1535364 1535365 ATAACCACCAAAAAG CCCAACACCCGCAGAAA GTAT TATCTGTGGATGCTGGG TTTGCTATTATAACG TERM 1973 1535402 - 1535365 - T 89 -11.3 -3.48529 | opp_overlap 1535365, overlap 1535364 ATAACCACCAAAAAG CCCAACACCCGCAGAAA GTAT TATCTGTGGATGCTGGG TTTGCTATTATAACG LVIS_1569 1536631 - 1535453 - | Beta-lactamase class C related penicillin binding protein recX 1537462 - 1536662 - | recombination regulator RecX LVIS_1571 1537677 - 1538126 + | flavodoxin TERM 1974 1538121 - 1538176 + T 100 -8.4 -5.05606 | opp_overlap 1538129 1538134, overlap 1538134 GTAGCAGCTGTTCAA GCCTAATACAAAACGAGCTCAAGACA TTTT TGTCTCGAGCTCGTTTTAGGTTAATC TTTATTTTTCTTCAA TERM 1975 1538168 - 1538129 - T 100 -19.6 -3.09492 | opp_overlap 1538121 1538134, overlap 1538134 TGTTCAAGCCTAATA CAAAACGAGCTCAAGACA TTTT TGTCTCGAGCTCGTTTTA GGTTAATCTTTATTT TERM 1976 1538163 - 1538134 - T 100 -17.3 -4.6821 | opp_overlap 1538134 1538121, overlap 1538129 AAGCCTAATACAAAA CGAGCTCAAGACA TTTT TGTCTCGAGCTCG TTTTAGGTTAATCTT TERM 1977 1538134 - 1538163 + T 100 -15.1 -4.31688 | opp_overlap 1538129 1538134, overlap 1538121 AAGCCTAATACAAAA CGAGCTCAAGACA TTTT TGTCTCGAGCTCG TTTTAGGTTAATCTT LVIS_1572 1539082 - 1538171 - | ribonuclease BN-like family protein LVIS_1573 1539949 - 1539098 - | hypothetical protein LVIS_1574 1541072 - 1539942 - | UDP-N-acetylglucosamine 2-epimerase LVIS_1575 1541357 - 1542208 + | glycosyltransferase-like protein TERM 1978 1542217 - 1542238 + T 100 -12.3 -5.44119 | ACAATAATCATTCGA CACCGGCCA GAAG TGGTCGGTG TTTTTTTGCCATACA TERM 1979 1542282 - 1542259 - T 100 -9.6 -5.36441 | TTGCCATACAAAAAA GGCTCATGTC CGAA GACACAAGCC ACAATTATTATTTAA LVIS_1576 1543649 - 1542294 - | H+/gluconate symporter related permease LVIS_1577 1544260 - 1543808 - | UspA family nucleotide-binding protein LVIS_1578 1544525 - 1544337 - | hypothetical protein TERM 1980 1544587 - 1544565 - R 100 -12.1 -5.00616 | GTTGTTTTTAAAAAA GTCATCACG TTCAT CGTGATGAC CACTTAACTGTCCCC LVIS_1580 1546043 - 1544718 - | superfamily II DNA/RNA helicase TERM 1981 1544886 - 1544911 + g 73 -10.3 -3.1506 | overlap 1544878 1544877 TTCTGTTGGCGCTTG CGCCGTTGTCC GATT GGCCACCGGCG TTGCTACAGACGTTT LVIS_1581 1547060 - 1546056 - | dehydrogenase related protein LVIS_1582 1547223 - 1547585 + | hypothetical protein TERM 1982 1547655 - 1547619 - T 100 -22.5 -3.40788 | opp_overlap 1547619 AGGGAACCTAATTAA GAGAGCTGACCGACGAT CTA ATCGTTGGTCAGCTCTC TTTTAGTGAATAAAA TERM 1983 1547619 - 1547655 + T 100 -24.7 -4.2828 | opp_overlap 1547619 AGGGAACCTAATTAA GAGAGCTGACCGACGAT CTA ATCGTTGGTCAGCTCTC TTTTAGTGAATAAAA LVIS_1583 1548419 - 1547658 - | Lyzozyme M1 (1,4-beta-N-acetylmuramidase) LVIS_1584 1549335 - 1548475 - | transcriptional regulator TERM 1984 1549492 - 1549519 + H 100 -13.5 -3.56643 | opp_overlap 1549492 ATTATGTTGAATTCA CCCGTTCGATC ACCAAC GATCGAGCGGG TTTACAAACTCTAGC TERM 1985 1549519 - 1549492 - H 81 -12 -2.53382 | opp_overlap 1549492 ATTATGTTGAATTCA CCCGTTCGATCA CCAA CGATCGAGCGGG TTTACAAACTCTAGC LVIS_1585 1549555 - 1551102 + | gluconate kinase TERM 1986 1551208 - 1551245 + F 100 -12.9 -3.24747 | overlap 1551217 AATATGTGTACTTCT TATTGGAGAGCCAACGT TCTC ACGTTGGCTTTTCAAAA TTCATCATATGAAAG TERM 1987 1551217 - 1551236 + F 100 -12.2 -4.15106 | overlap 1551208 ACTTCTTATTGGAGA GCCAACGT TCTC ACGTTGGC TTTTCAAAATTCATC LVIS_1586 1551273 - 1552631 + | H+/gluconate symporter related permease TERM 1988 1552645 - 1552670 + F 100 -11.2 -5.4505 | opp_overlap 1552645 1552642 AAGCTACAAAGATCA GGTTGTTCGC CATAAC GCGGACAACC TTTTTTCTTGGAAAA TERM 1989 1553571 - 1553583 + G 81 -7.7 -4.59853 | opp_overlap 1553570 AATGCTGCAGCAGAT GCTTC AAT GAAGC TTTTTGGACAGTTCG LVIS_1587 1552770 - 1554089 + | amino acid transporter TERM 1990 1554097 - 1554138 + T 76 -9.6 -3.46509 | opp_overlap 1554103, overlap 1554102 1554103 AGGCTTAACTACCTA AAAAAAGGCTCAGACCAT AAATAA ATGGTTTGAGCCCTTTTA TTAATGTTCTTGAAC TERM 1991 1554102 - 1554133 + T 100 -9.5 -4.79657 | opp_overlap 1554103, overlap 1554097 1554103 TAACTACCTAAAAAA AGGCTCAGACCAT AAATAA ATGGTTTGAGCCC TTTTATTAATGTTCT TERM 1992 1554132 - 1554103 - T 100 -10.8 -5.49729 | opp_overlap 1554103 1554102 1554097 AACTACCTAAAAAAA GGCTCAGACCAT AAATAA ATGGTTTGAGCC CTTTTATTAATGTTC TERM 1993 1554103 - 1554132 + T 100 -13 -3.46167 | opp_overlap 1554103, overlap 1554102 1554097 AACTACCTAAAAAAA GGCTCAGACCAT AAATAA ATGGTTTGAGCC CTTTTATTAATGTTC LVIS_1588 1555488 - 1554139 - | fucose permease TERM 1994 1554769 - 1554779 + g 75 -5.4 -4.77775 | CCGTTCCTCTTGTTG TTGC CCC GCAA TTTCTTTTGTCGCCT LVIS_1589 1555934 - 1555539 - | D-ribose pyranase TERM 1995 1556250 - 1556231 - R 100 -8.6 -5.53288 | opp_overlap 1556231 1556230 TTTAAGCCAAAAAAA GTGAACCC GTTA AGGTTCAC CTTTCATCTCTAACA LVIS_1590 1557786 - 1556269 - | gamma-glutamylcysteine synthetase TERM 1996 1557933 - 1557902 - R 95 -9.5 -4.49756 | gap 1, opp_overlap 1557901, overlap 1557894 GGGGAAATACCAAAA GGCATG-CCGGACT TTTAC AGTCTGGGCATGCC CTCATTGAAACATTA LVIS_1591 1559244 - 1557946 - | thymidine phosphorylase LVIS_1592 1560240 - 1559281 - | citrate lyase regulator TERM 1997 1560299 - 1560273 - R 100 -9.2 -5.15634 | opp_overlap 1560273 1560297 CATCTCATTAAAAAA CGCGGTCGCGGG GTC CCCGTTCCCGCG TTTTCATTACGCTTT TERM 1998 1560273 - 1560299 + r 100 -11.4 -4.43911 | opp_overlap 1560273, overlap 1560297 CATCTCATTAAAAAA CGCGGTCGCGGG GTC CCCGTTCCCGCG TTTTCATTACGCTTT LVIS_1593 1561013 - 1560306 - | purine-nucleoside phosphorylase TERM 1999 1560824 - 1560844 + g 74 -9.7 -3.5489 | opp_overlap 1560810, overlap 1560820 TCGATGGAATCCCCA TCCCGGTTC CTT GAACCGAGA TTCGTTTGCCCTTGT LVIS_1594 1562231 - 1561044 - | phosphopentomutase LVIS_1595 1562952 - 1562263 - | deoxyribose-phosphate aldolase TERM 2000 1563212 - 1563191 - R 84 -5.2 -5.28176 | opp_overlap 1563191 TTTATTCACAAAAAA GATATGAG TCGATC CCCATATC TTCCGTAGTTTACCG LVIS_1596 1563506 - 1563267 - | XRE family transcriptional regulator TERM 2001 1563292 - 1563303 + g 77 -4.4 -5.06414 | opp_overlap 1563292 TGTTGCCGCAAAGAA CGAA TAAA TTCG TTTTTATTACCAAAA LVIS_1597 1563662 - 1564018 + | XRE family transcriptional regulator TERM 2002 1564148 - 1564185 + T 100 -15.7 -4.99134 | opp_overlap 1564148 CGGTCTATCGAAAAA GAAGCGACACACAGTCA ATCA TGACAATGTGTCGCTTC TTTTTCATTTAAGCT TERM 2003 1564185 - 1564148 - T 100 -17.9 -4.65895 | opp_overlap 1564148 CGGTCTATCGAAAAA GAAGCGACACACAGTCA ATCA TGACAATGTGTCGCTTC TTTTTCATTTAAGCT LVIS_1598 1564979 - 1564194 - | protein tyrosine/serine phosphatase TERM 2004 1564263 - 1564277 + g 75 -11.4 -2.50195 | opp_overlap 1564261 1564263, overlap 1564262 1564261 CGTATCACGTAAATA GGCGGT CAT ACCGCC GTATTCATAATCGAT TERM 2005 1564277 - 1564263 - G 82 -11.4 -3.42395 | opp_overlap 1564263 1564262 1564261, overlap 1564261 CGTATCACGTAAATA GGCGGT CAT ACCGCC GTATTCATAATCGAT LVIS_1599 1566061 - 1564997 - | NADH:flavin oxidoreductase LVIS_1600 1566423 - 1566079 - | propanediol utilization protein LVIS_1601 1567629 - 1566442 - | acetate kinase LVIS_1602 1568908 - 1567787 - | NADPH-dependent 1,3-propanediol dehydrogenase LVIS_1603 1570345 - 1568912 - | CoA-dependent propionaldehyde dehydrogenase TERM 2006 1570384 - 1570369 - R 73 -6 -4.56775 | ACTCTCCTTTAAAAA GGCGGC GACG GCTGCC TCACAAATTGATTGA LVIS_1604 1570827 - 1570348 - | glycolate and propanediol utilization protein LVIS_1605 1571406 - 1570831 - | adenosylcobalamin-dependent diol dehydratase gamma subunit LVIS_1606 1571694 - 1571422 - | propanediol utilization protein LVIS_1607 1572197 - 1571676 - | propanediol utilization protein LVIS_1608 1572844 - 1572218 - | propanediol utilization protein TERM 2007 1572786 - 1572768 - G 75 -10.3 -3.34398 | opp_overlap 1572759, overlap 1572766 1572783 TGGTGGTTGGAAACA CCGATCG GAATA CGATCGG GATCCAATTCTTCTT LVIS_1609 1573163 - 1572873 - | propanediol utilization protein LVIS_1610 1573671 - 1573183 - | propanediol utilization protein TERM 2008 1573557 - 1573567 + g 74 -6.8 -4.3898 | opp_overlap 1573529 CTGTTACCCAGCCAC CACC CTT GGTG TTTTCTAACCCTACT LVIS_1611 1574038 - 1573685 - | diol dehydratase medium subunit LVIS_1612 1575869 - 1574019 - | propanediol utilization ATPase LVIS_1613 1576411 - 1575884 - | propanediol dehydratase, small subunit LVIS_1614 1577143 - 1576424 - | diol dehydratase medium subunit TERM 2009 1576961 - 1576972 + g 78 -5.8 -4.6902 | overlap 1576956 1576969 CCCAACGTGTTTGAA CCAG TCAA CTGG TTTTTCCGGTTCTGG LVIS_1615 1578840 - 1577164 - | propanediol dehydratase, large subunit TERM 2010 1578508 - 1578521 + g 74 -9.5 -3.47573 | TTCTTCAGCTTTGGC CGGCG TCAT CGCCG TTGTAATCTCAATGA LVIS_1616 1579571 - 1578855 - | propanediol utilization protein LVIS_1617 1579969 - 1579691 - | propanediol utilization protein TERM 2011 1581060 - 1581047 - g 89 -5.9 -5.26119 | overlap 1581048 TTTTTAAAAAGAAAA CGGGG ATCA CCCCA TCCGAATTTCGCCAA LVIS_1618 1580281 - 1581369 + | AraC-type DNA-binding protein TERM 2012 1581369 - 1581411 + T 100 -10.7 -4.32651 | opp_overlap 1581374, overlap 1581374 CGACTACTCCAATTA AAAAAGAGCGATAACCAGA ACTTA TCCGGTTATCGCTCTTTAA TTTTGATCAATTATT TERM 2013 1581374 - 1581406 + T 100 -15 -4.23781 | opp_overlap 1581374, overlap 1581369 ACTCCAATTAAAAAA GAGCGATAACCAGA ACTTA TCCGGTTATCGCTC TTTAATTTTGATCAA TERM 2014 1581406 - 1581374 - T 100 -17.2 -5.27477 | opp_overlap 1581374 1581369 ACTCCAATTAAAAAA GAGCGATAACCAGA ACTTA TCCGGTTATCGCTC TTTAATTTTGATCAA LVIS_1619 1582129 - 1581422 - | glycerol uptake facilitator related permease (major Intrinsic protein family) TERM 2015 1583105 - 1583132 + r 72 -7.8 -3.86524 | opp_overlap 1583105 AAGGGCCAATCCAAA TTGATCGCAGTT TCTA ATTTGCGATCAA TTTGTGAGCCACTAT TERM 2016 1583360 - 1583338 - R 81 -4.2 -5.30348 | overlap 1583340 AGGGAACAACAAAAA TGGCTCTAAA TTA TTTAGAACAA CGAAGTATTACAGAA LVIS_1621 1586395 - 1583420 - | restriction endonuclease LVIS_1622 1587251 - 1586400 - | adenine specific DNA methylase Mod LVIS_1623 1587442 - 1587335 - | hypothetical protein TERM 2017 1587718 - 1587695 - g 91 -13.2 -3.40639 | gap 1 AATCTTACCAAGTAA TGGCTGACGCC TTA GGCGTC-GCCA AAGCTACGATTAGCT TERM 2018 1587812 - 1587842 + G 70 -7.7 -3.91084 | gap 1 GGCGGAATTGCGGTC GTCGTTCGATGCTG ACGG CAGCATT-AGCGAC TTTAATTACCAATCA LVIS_1624 1587613 - 1588533 + | IS30 family transposase LVIS_1625 1589416 - 1588547 - | adenine specific DNA methylase Mod LVIS_1626 1589614 - 1589420 - | transcriptional regulator TERM 2019 1589894 - 1589862 - R 100 -4.9 -5.93252 | CTGAAAAAGAAAAAA GTGTACTAATTTCAA TAA TCGAAAGAAGCACAC TTTTTGTCATCTGTA LVIS_1627 1591309 - 1589936 - | tRNA (uracil-5-)-methyltransferase related enzyme TERM 2020 1591180 - 1591193 + g 71 -6.7 -4.18018 | GAATCGTTACTTCTT CACCT GGTA AGGTG TTTTCAATAAACAAA TERM 2021 1591373 - 1591336 - R 76 -9.4 -3.46602 | gap 1, opp_overlap 1591335 1591332 1591331 TTTCTTAGATGAGAA GAGGGATTTTGCTAC TGTCGTGTC GT-GCAAAATCCCTC ATCAGTTTCATTTAT LVIS_1628 1592400 - 1591381 - | putative lipid kinase gatB 1593841 - 1592420 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 2022 1592984 - 1593025 + g 73 -9.5 -3.30124 | gap 1 GGCGGCATCTAGTTC CTTGATCCAGTCATCACTGA TGT TCAGTGCTGGCAGG-TCAGG TTCTGGGAAGTACCG LVIS_1630 1595310 - 1593841 - | Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase A subunit gatC 1595622 - 1595311 - | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 2023 1596234 - 1596223 - R 89 -7.2 -5.04601 | overlap 1596224 TCTATAAACCAAAAA GGCG TGCA CGCC GTAGCCCACACACCT LVIS_1632 1597407 - 1596262 - | hypothetical protein LVIS_1633 1599460 - 1597430 - | NAD-dependent DNA ligase TERM 2024 1599495 - 1599528 + r 76 -9.8 -3.2557 | AAATGCTTAGTCTAC GCGTTTGATTGG-GGC AAAG GCCGCCAAT-AAACGC TTAATCCCTTGTTCT LVIS_1634 1601738 - 1599486 - | superfamily I DNA/RNA helicase TERM 2025 1600704 - 1600687 - G 77 -8.5 -4.2573 | opp_overlap 1600687 TAAAGAATGGCAAAA TCACCAT AATC ATGGTGA TTTTGTTCCCGTTCT TERM 2026 1600687 - 1600704 + g 88 -8.5 -4.68705 | opp_overlap 1600687 TAAAGAATGGCAAAA TCACCAT AATC ATGGTGA TTTTGTTCCCGTTCT TERM 2027 1601914 - 1601939 + r 78 -10.6 -3.29364 | opp_overlap 1601914, overlap 1601917 GCTGTAAAAGAAAAA GAAGTTTAGG CTGGTC CCTAAACTTC TTAATGGTTACTGAT TERM 2028 1601939 - 1601914 - R 100 -10.6 -5.45802 | opp_overlap 1601914 1601917 GCTGTAAAAGAAAAA GAAGTTTAGG CTGGTC CCTAAACTTC TTAATGGTTACTGAT LVIS_1635 1603098 - 1601947 - | phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) LVIS_1636 1603769 - 1603194 - | adenine/guanine phosphoribosyltransferase-like protein LVIS_1637 1604764 - 1603856 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase LVIS_1638 1604873 - 1605850 + | geranylgeranyl pyrophosphate synthase TERM 2029 1605999 - 1606024 + T 100 -10.5 -5.58209 | GCAAGCGACCACTGT GACCTTATCCT TTTG GGGATGAGGTC TTTTTTTGCGTTTCC TERM 2030 1606136 - 1606112 - T 100 -10 -5.60993 | TTTTCTATAAAAAAA GACGCCAGCC TAATC GACTGACGTC CCAAATTTCCTAAGA LVIS_1639 1607893 - 1606154 - | cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component TERM 2031 1606755 - 1606783 + g 71 -2.9 -4.83615 | overlap 1606757 AGCAGCGTACTTTTA CCGGTACCGCTGG GAC CCAGTAGCGCCAG TTTTTCTCCGGGATG TERM 2032 1608871 - 1608853 - R 75 -6 -4.70879 | overlap 1608844 CCCAAAGCCTAAAAA GACCGCTA CAA TAGCAATC GATAACGTGGTAAAG TERM 2033 1608915 - 1608935 + r 100 -11.9 -4.66318 | AGGTCGATGTCATAG CGATGGTCA GTG TGGCCATCG TTTTCTTGCGATAAT TERM 2034 1609658 - 1609670 + r 77 -6.3 -4.64766 | opp_overlap 1609658 AAGTGATAACACTAA TGCTA TGA TAGCA TTTTTCGCGTGTCAG TERM 2035 1609690 - 1609702 + r 71 -6.9 -4.22948 | overlap 1609691 TCGCGTGTCAGAACT TGCCG AAG CGGCG TTTTCACTGAATTTT LVIS_1641 1610730 - 1609720 - | cytochrome bd-type quinol oxidase, subunit 2 LVIS_1642 1612174 - 1610723 - | cytochrome bd-type quinol oxidase, subunit 1 LVIS_1643 1612463 - 1613410 + | phosphoglycerate dehydrogenase-like protein TERM 2036 1613426 - 1613465 + F 100 -17.5 -5.24799 | opp_overlap 1613436 TTGATTTCTACTCGA TCAGGACAATCATAATC ATTTAA GATTATGGTTGTCCTGA TTTTTCTATTTATAA LVIS_1644 1613588 - 1614880 + | protein tyrosine/serine phosphatase TERM 2037 1614921 - 1614893 - f 100 -11.7 -4.08948 | opp_overlap 1614893 TAATTTCACAAAGAA GCGAAGGCAGTCA TCA TAGCCGCCTTCGC TTTTTAATATGGTAG TERM 2038 1614893 - 1614921 + F 100 -9.5 -4.82667 | opp_overlap 1614893 TAATTTCACAAAGAA GCGAAGGCAGTCA TCA TAGCCGCCTTCGC TTTTTAATATGGTAG TERM 2039 1615135 - 1615112 - g 91 -13.2 -3.40639 | gap 1 AATCTTACCAAGTAA TGGCTGACGCC TTA GGCGTC-GCCA AAGCTACGATTAGCT TERM 2040 1615229 - 1615259 + G 70 -7.7 -3.91084 | gap 1 GGCGGAATTGCGGTC GTCGTTCGATGCTG ACGG CAGCATT-AGCGAC TTTAATTACCAATCA LVIS_1645 1615030 - 1615950 + | IS30 family transposase TERM 2041 1616030 - 1616064 + T 75 -8.7 -3.65514 | opp_overlap 1616030, overlap 1616026 AAAGCATGCAAAAAA GGCTCACTTATCA CATGTTACA TGACAAGTGAGCC TTCATTTAATTTAGC TERM 2042 1616064 - 1616030 - T 100 -15.2 -5.13521 | opp_overlap 1616030 1616026 AAAGCATGCAAAAAA GGCTCACTTATCACAT GTT ACATGACAAGTGAGCC TTCATTTAATTTAGC LVIS_1646 1617151 - 1616081 - | transcriptional regulator TERM 2043 1617109 - 1617122 + g 72 -5.9 -4.36595 | GATGTTTCTTTCGGC GCGGT CGTT GCCGC TTTTGCATTTCCATG LVIS_1647 1618347 - 1617328 - | lipoate-protein ligase A LVIS_1648 1619812 - 1618400 - | amino acid transporter TERM 2044 1620346 - 1620389 + H 100 -24.2 -5.1167 | opp_overlap 1620351, overlap 1620351 CTTGGGTGGTACCGC GAAAAGTCTTTCGTCCCTAG ATAT CTAGGGACGGGAGACTTTTC TTTTTGTCTTAAATT TERM 2045 1620351 - 1620384 + H 100 -18.3 -5.40873 | opp_overlap 1620351, overlap 1620346 GTGGTACCGCGAAAA GTCTTTCGTCCCTAG ATAT CTAGGGACGGGAGAC TTTTCTTTTTGTCTT TERM 2046 1620384 - 1620351 - H 100 -13.9 -4.11216 | opp_overlap 1620351 1620346 GTGGTACCGCGAAAA GTCTTTCGTCCCTAG ATAT CTAGGGACGGGAGAC TTTTCTTTTTGTCTT LVIS_1649 1620428 - 1621435 + | asparagine synthetase AsnA TERM 2047 1621512 - 1621478 - T 100 -12.3 -4.41087 | opp_overlap 1621478 ACAATTAAACAGAAA GCCATCTAGCTTCTC TTAGT GAGAAATTAGATGGC TTTTTAATGTGTTCC TERM 2048 1621478 - 1621512 + T 100 -12.3 -4.87807 | opp_overlap 1621478 ACAATTAAACAGAAA GCCATCTAGCTTCTC TTAGT GAGAAATTAGATGGC TTTTTAATGTGTTCC LVIS_1650 1622015 - 1621542 - | riboflavin synthase beta-chain LVIS_1651 1623207 - 1622008 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase LVIS_1652 1623805 - 1623200 - | riboflavin synthase subunit alpha LVIS_1653 1624860 - 1623790 - | pyrimidine reductase, riboflavin biosynthesis TERM 2049 1624882 - 1624913 + r 88 -10.8 -3.79251 | gap 1, opp_overlap 1624884, overlap 1624883 TTCACCTCACGAAAA AAGGGCCCCGCA-GT TAA ACATGCGGGGCCCCA TTTAATAGTAAGCTA TERM 2050 1624883 - 1624912 + r 95 -14.3 -2.87229 | gap 1, opp_overlap 1624884, overlap 1624882 TCACCTCACGAAAAA AGGGCCCCGCA-GT TAA ACATGCGGGGCCCC ATTTAATAGTAAGCT TERM 2051 1624911 - 1624884 - R 100 -17.8 -5.15634 | gap 1, opp_overlap 1624883 1624882 CACCTCACGAAAAAA GGGCCCCGCA-GT TAA ACATGCGGGGCCC CATTTAATAGTAAGC TERM 2052 1625183 - 1625193 + r 79 -6.8 -4.69214 | opp_overlap 1625182 ACAACCTTGAATCAC TGGC TAA GCCA TTTATTTCTTCAGTG LVIS_1654 1625857 - 1625195 - | K+ transport system, NAD-binding component LVIS_1655 1627222 - 1625870 - | Trk-type K+ transport system, membrane component LVIS_1656 1627406 - 1628374 + | phosphomannose isomerase TERM 2053 1628392 - 1628413 + T 83 -8.7 -4.12188 | opp_overlap 1628392 CAATTCACAAAAAAA TCCCCACCA TCGC TGGTGAGGA TTTTGCCAATCGTAA TERM 2054 1628413 - 1628392 - T 100 -10.9 -5.66684 | opp_overlap 1628392 CAATTCACAAAAAAA TCCCCACCA TCGC TGGTGAGGA TTTTGCCAATCGTAA rpsI 1628831 - 1628439 - | 30S ribosomal protein S9 rplM 1629288 - 1628845 - | 50S ribosomal protein L13 LVIS_1659 1630224 - 1629427 - | pseudouridylate synthase LVIS_1660 1631034 - 1630234 - | ABC-type cobalt transport system, permease component CbiQ related transporter LVIS_1661 1631899 - 1631027 - | ABC-type cobalt transport system, ATPase component LVIS_1662 1632714 - 1631875 - | cobalt transporter ATP-binding subunit LVIS_1663 1633359 - 1632976 - | ribosomal protein L17 LVIS_1664 1634340 - 1633390 - | DNA-directed RNA polymerase subunit alpha LVIS_1665 1634817 - 1634428 - | 30S ribosomal protein S11 rpsM 1635200 - 1634835 - | 30S ribosomal protein S13 rpmJ 1635346 - 1635227 - | 50S ribosomal protein L36 LVIS_1668 1635594 - 1635376 - | translation initiation factor 1 TERM 2055 1635526 - 1635554 + g 75 -11.8 -2.68071 | opp_overlap 1635532, overlap 1635532 GTTTTCTAATTCGAC CCGAAACATCGC GTTAG GCAATGTTTCGG TAACTTTACCTTCGA LVIS_1669 1636418 - 1635759 - | adenylate kinase TERM 2056 1636493 - 1636453 - R 74 -6.1 -4.57341 | overlap 1636458 AATTTTCCCGAAAAA CACAAGCAGGTGTGCCAAT TAG ATCAACACACCCGCTGGAA ACTCATTAAGCTGGT TERM 2057 1636488 - 1636458 - R 93 -11.2 -4.07746 | overlap 1636453 TCCCGAAAAACACAA GCAGGTGTGCCAAT TAG ATCAACACACCCGC TGGAAACTCATTAAG secY 1637809 - 1636499 - | preprotein translocase subunit SecY LVIS_1671 1638243 - 1637809 - | ribosomal protein L15 rpmD 1638461 - 1638279 - | 50S ribosomal protein L30 rpsE 1638979 - 1638476 - | 30S ribosomal protein S5 LVIS_1674 1639358 - 1639002 - | ribosomal protein L18 LVIS_1675 1639938 - 1639402 - | ribosomal protein L6P rpsH 1640366 - 1639968 - | 30S ribosomal protein S8 LVIS_1677 1640585 - 1640400 - | ribosomal protein S14 rplE 1641146 - 1640604 - | 50S ribosomal protein L5 LVIS_1679 1641483 - 1641172 - | ribosomal protein L24 LVIS_1680 1641886 - 1641518 - | ribosomal protein L14 LVIS_1681 1642203 - 1641937 - | ribosomal protein S17 LVIS_1682 1642426 - 1642232 - | 50S ribosomal protein L29 rplP 1642850 - 1642416 - | 50S ribosomal protein L16 rpsC 1643511 - 1642852 - | 30S ribosomal protein S3 TERM 2058 1643366 - 1643380 + g 73 -7.1 -4.22346 | opp_overlap 1643366 ACAGTAGATACAGAA GCGTC AACCA GACGC TTTTCGATGAATTTA rplV 1643871 - 1643515 - | 50S ribosomal protein L22 TERM 2059 1643881 - 1643895 + r 84 -2.8 -5.67063 | AGCCATTAGTTAATC CTCCTT ATC AACGAG TTTTTTTATCGTCGC rpsS 1644163 - 1643888 - | 30S ribosomal protein S19 rplB 1645090 - 1644242 - | 50S ribosomal protein L2 LVIS_1688 1645404 - 1645117 - | ribosomal protein L23 rplD 1646027 - 1645404 - | 50S ribosomal protein L4 TERM 2060 1645922 - 1645935 + g 74 -6.7 -4.45664 | opp_overlap 1645919, overlap 1645919 GTTGCATCAAAATCG TGTCG AATA CGACA TTTTCGTTAGGTTCA rplC 1646699 - 1646049 - | 50S ribosomal protein L3 TERM 2061 1646310 - 1646290 - G 71 -8.9 -3.50853 | opp_overlap 1646289 1646290 CGGTGGTAACGAGAA CCATGGGCC ATA GGGCCACGG CTTTGACCATCTTTA rpsJ 1647050 - 1646742 - | 30S ribosomal protein S10 TERM 2062 1647255 - 1647272 + r 85 -4.1 -5.42259 | opp_overlap 1647251, overlap 1647251 1647247 1647246 CGCCTGACAAGGGAT TTCACGG AATT CCTTGAA TTTTTTTGGAAGTAG LVIS_1692 1648664 - 1647333 - | Na+-driven multidrug efflux pump TERM 2063 1648800 - 1648778 - R 100 -12 -5.252 | opp_overlap 1648777 1648778 GATGCCGACAAAAAA CGCCCCACCA AAT TGGTAGGACG CTTTTACGAATGCAC LVIS_1693 1650921 - 1648822 - | elongation factor G TERM 2064 1650966 - 1651005 + r 73 -10.2 -2.53213 | gap 1, opp_overlap 1650968 CGTAGATTGTGGCAA AAGGTGGCTACTATCATCA CAC TGATT-TAGTAGCCACCTC TCGATTAAAGGATTA TERM 2065 1651003 - 1650968 - R 100 -12.8 -4.09243 | gap 1, opp_overlap 1650966 TAGATTGTGGCAAAA GGTGGCTACTATCATCA CAC TGATT-TAGTAGCCACC TCTCGATTAAAGGAT LVIS_1694 1651576 - 1651106 - | 30S ribosomal protein S7 rpsL 1652065 - 1651652 - | 30S ribosomal protein S12 TERM 2066 1652722 - 1652738 + G 81 -12.3 -3.04696 | overlap 1652720 CCTGAGTCTCGCACT CTGGGGA CAC TCCCCAG TCGTTTGGTTGATTG TERM 2067 1652791 - 1652810 + G 76 -10.8 -3.21416 | GAATTGGTTATGGTC TCGTTGGT CTGT ACCAACGA TTGGTAATGGCGATC LVIS_1696 1652345 - 1652992 + | Type II secretory pathway, prepilin signal peptidase PulO related peptidase TERM 2068 1653034 - 1653010 - T 100 -14.3 -5.09225 | opp_overlap 1653010 ATGCTATGTAAAAAA GGACCCTCGCC ACT GACGAGAGTCC TTTTTCTTAGGCTTA TERM 2069 1653010 - 1653034 + T 100 -9.9 -5.10208 | opp_overlap 1653010 ATGCTATGTAAAAAA GGACCCTCGCC ACT GACGAGAGTCC TTTTTCTTAGGCTTA TERM 2070 1653045 - 1653062 + T 71 -8.5 -3.45032 | overlap 1653038 AGTCCTTTTTCTTAG GCTTAGT TGTC ACTAAGC TTGTGAGTCTTCTTG LVIS_1697 1656704 - 1653057 - | DNA-directed RNA polymerase subunit beta' TERM 2071 1655459 - 1655478 + g 73 -10 -3.27029 | opp_overlap 1655471, overlap 1655457 1655471 GGTGAAGCGTAGGGG CCCGGTTC AACA GAACTGGG TGTTCCTTGATGACA rpoB 1660337 - 1656726 - | DNA-directed RNA polymerase subunit beta TERM 2072 1660465 - 1660434 - R 100 -6 -5.75342 | opp_overlap 1660434 1660435, overlap 1660406 1660435 TTTTGGCAAAAAAAA TCCAAAAACAAATC ACTC AATTTGCTTTTGGC TTCTTATAACAAACG TERM 2073 1660464 - 1660435 - R 83 -9.5 -4.04482 | opp_overlap 1660435 1660434, overlap 1660406 1660434 TTTGGCAAAAAAAAT CCAAAAACAAATC ACTC AATTTGCTTTTGG CTTCTTATAACAAAC LVIS_1699 1661181 - 1660576 - | transcriptional regulator TERM 2074 1661380 - 1661418 + r 71 -9 -3.25358 | opp_overlap 1661381, overlap 1661378 1661376 GTTAACGGCACAAAA ACGGGTTACCAAGAAT CTGAATC ATTCTTAGTAACCCGC TGTGCTTTTTATTAA TERM 2075 1661417 - 1661381 - R 100 -14.7 -4.87786 | opp_overlap 1661380 1661378 1661376 TTAACGGCACAAAAA CGGGTTACCAAGAAT CTGAATC ATTCTTAGTAACCCG CTGTGCTTTTTATTA LVIS_1700 1663941 - 1661455 - | ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones LVIS_1701 1664426 - 1663959 - | transcriptional repressor of class III stress genes TERM 2076 1664593 - 1664557 - R 93 -4.4 -5.89921 | gap 1 ATCATAACAAAAAAA CGACCGACATCCAAACA ATTA CGTAAGGA-GTCGATCG TTTCAGCACTTCTGT TERM 2077 1665720 - 1665684 - R 86 -6.6 -5.00895 | CTTAGCACACAAAAA TTGCCATGACGCAGCC TATTT AACGACGTCATGACAA TTATTTTGATCCGTT LVIS_1710 1667019 - 1665748 - | seryl-tRNA synthetase TERM 2078 1666504 - 1666483 - G 73 -2.3 -5.10461 | gap 1 CTCATCCAAGAAAAA GTTGTACACG GCC CGT-TCCAAC CGCGCACCGGCACCC TERM 2079 1667085 - 1667060 - R 100 -11.2 -5.39721 | GGATGATACAAAAAA GGTCTCCGTC ACATGG GACGAAGACC TTCGCGGTACCACCC LVIS_1711 1667934 - 1667302 - | deoxynucleoside kinase TERM 2080 1668065 - 1668100 + r 78 -9.7 -3.51158 | gap 1, opp_overlap 1668065, overlap 1668059 CCAATTCATTAAAAA CGGCACCTCG-TAGGC CATAA GCCTAACGAGACGCCG TTAATATTATTTCAT TERM 2081 1668100 - 1668065 - R 100 -14.8 -4.77157 | gap 1, opp_overlap 1668059 1668065 CCAATTCATTAAAAA CGGCACCTCG-TAGGCC ATA AGCCTAACGAGACGCCG TTAATATTATTTCAT LVIS_1712 1669640 - 1668141 - | amino acid transporter TERM 2082 1668343 - 1668318 - G 76 -9.1 -3.81 | ATGACCCGAGAAGAA TGATTGTGGGT CCTG ACCGACAATCA CGGCCACACACAGGA TERM 2083 1668533 - 1668516 - G 70 -9.9 -3.18383 | ACTTGCAGCCACCAA CCACAGA TAAA TCTGTGG ACCGGCAATACTACT TERM 2084 1668581 - 1668562 - G 73 -7.8 -3.96705 | CTGATAAAAGTCAAA GCCGCAAC AATG GTTGTGGC AAATAGTGCCGGGTA TERM 2085 1669730 - 1669697 - R 100 -11.9 -5.45652 | ACTTGCAATAAAAAA CTCTCTTCCACAAAA GTTG CTTTGCGAAAGAGAG TTGGACAGATTACTA LVIS_1713 1670544 - 1669990 - | acetyltransferase TERM 2086 1670711 - 1670696 - g 73 -7.6 -4.08216 | opp_overlap 1670688 1670698 CTACTTGCGGGAAAA TACCGA TTCC TCGGTA ACTTACCCGACCGTA TERM 2087 1670943 - 1670956 + G 78 -5.9 -4.7629 | overlap 1670937 GTGGACCTTCGCCGA CTGGC GGTC GCCGG TTTTTCCGTTGGTGG LVIS_1714 1670628 - 1671422 + | esterase/lipase TERM 2088 1671463 - 1671509 + T 70 -8.1 -3.61097 | opp_overlap 1671467, overlap 1671461 1671467 ATGATTTAACCGCAA AAAATAGAGCTGTCCAGAATC ATTCA GATTCCTGACAGCTCTATTGG TGTTTAATTCTATAC TERM 2089 1671467 - 1671505 + T 100 -13.3 -3.51058 | opp_overlap 1671467, overlap 1671463 1671461 TTTAACCGCAAAAAA TAGAGCTGTCCAGAATC ATTCA GATTCCTGACAGCTCTA TTGGTGTTTAATTCT TERM 2090 1671505 - 1671467 - T 100 -15.5 -5.09426 | opp_overlap 1671467 1671463 1671461 TTTAACCGCAAAAAA TAGAGCTGTCCAGAATC ATTCA GATTCCTGACAGCTCTA TTGGTGTTTAATTCT LVIS_1715 1672194 - 1671526 - | membrane-associated phospholipid phosphatase LVIS_1716 1672755 - 1672306 - | hypothetical protein LVIS_1717 1673533 - 1672772 - | hypothetical protein TERM 2091 1673609 - 1673593 - R 76 -2.9 -5.27335 | overlap 1673595 GTTGCGAAATAAAAA GTTCACC ATC GATGACC GGCTAAATTGACAGC TERM 2092 1673631 - 1673648 + r 71 -7 -4.17523 | opp_overlap 1673631 ATTGACAGCAAAAAA GCCTGA ACACCG TCAGGC TTTTAAAAGTTATTT TERM 2093 1673648 - 1673631 - R 88 -7 -5.22312 | opp_overlap 1673631 ATTGACAGCAAAAAA GCCTGA ACACCG TCAGGC TTTTAAAAGTTATTT LVIS_1718 1674305 - 1673658 - | Mn-dependent transcriptional regulator LVIS_1719 1675263 - 1674367 - | Co/Zn/Cd efflux system component TERM 2094 1675211 - 1675200 - G 71 -4.4 -4.8143 | CTAACAATTCAAAAA TCGT AATA ACGA CGTTCAAGATGGTGA TERM 2095 1675403 - 1675376 - R 100 -12.8 -5.26316 | opp_overlap 1675373 1675376 TGATTCCACAAAAAA GGGCTTAGTCAG CACG CCAACTAAGCCC TAGTTATATCTAATA LVIS_1720 1675999 - 1675436 - | acetyltransferase TERM 2096 1675748 - 1675762 + g 73 -10 -3.31415 | GTATGGCGCTTGCTT GGTCAG CCA CTGACC TTCAATTTCCTGATA TERM 2097 1676251 - 1676241 - H 82 -4.6 -5.25976 | AAGTAAAAAAATAAA CCCA TAC CGGG TAGAATATGTTTAAC LVIS_1721 1676339 - 1677283 + | IS30 family transposase LVIS_1722 1677488 - 1677727 + | transcriptional regulator TERM 2098 1677763 - 1677788 + T 84 -5.4 -5.38047 | gap 1, opp_overlap 1677763 AATGGGTGAAGAGAA CGGCCGGTGAT GATGA GTC-CCGGTCG TTTTTTGTATGCGTA TERM 2099 1677852 - 1677821 - T 100 -16.6 -4.48987 | opp_overlap 1677821 GTGGGATAACTAAAA CGGCCGGTCGAGAA GAAA TCCTCGATCGGCCG TTTAGTCTATTCTGC TERM 2100 1677821 - 1677852 + T 100 -16.6 -3.95449 | opp_overlap 1677821 GTGGGATAACTAAAA CGGCCGGTCGAGAA GAAA TCCTCGATCGGCCG TTTAGTCTATTCTGC LVIS_1723 1678584 - 1677859 - | hypothetical protein TERM 2101 1678006 - 1678018 + g 79 -3.3 -5.18643 | opp_overlap 1678004 TTTTTTAACATAAGC GGTTG CAG CGGCC TTTTGTTTTGCTTGA TERM 2102 1678560 - 1678546 - G 73 -5.6 -4.55544 | overlap 1678547 AACATAGAAGTAAAA TGCGAG AAT CGCGCA AATGACAAGTGTAAC LVIS_1724 1680080 - 1678584 - | major facilitator superfamily permease TERM 2103 1679922 - 1679905 - G 75 -7.7 -4.29227 | overlap 1679906 TTAACCAGTAAGAAA CCAGTGG TTAG CCACTGA ACAGTTGATGTGGAA LVIS_1725 1680304 - 1680741 + | transcriptional regulator TERM 2104 1681036 - 1681064 + T 100 -6.7 -5.93809 | overlap 1681030 CACTGCTTCCGTGAA CCGTTCAAGTTTT GAA AGTTCTTGAACGG TTTTTTTTGTGCGGC LVIS_1726 1682030 - 1681086 - | IS30 family transposase TERM 2105 1682118 - 1682128 + H 82 -4.6 -5.25976 | GTTAAACATATTCTA CCCG GTA TGGG TTTATTTTTTTACTT LVIS_1727 1682237 - 1682878 + | branched-chain amino acid permease (azaleucine resistance) LVIS_1728 1682863 - 1683195 + | hypothetical protein TERM 2106 1683233 - 1683212 - T 85 -9.4 -4.1964 | opp_overlap 1683212 TCCAATATCCGAAAA GTCCCCGC ACAGTA GCGAGGAC TTTTTTTATTTGTGA TERM 2107 1683212 - 1683233 + T 100 -7.2 -6.02919 | opp_overlap 1683212 TCCAATATCCGAAAA GTCCCCGC ACAGTA GCGAGGAC TTTTTTTATTTGTGA LVIS_1729 1684516 - 1683239 - | xanthine/uracil permease TERM 2108 1684575 - 1684545 - R 90 -7.5 -5.14563 | TTGTCCATGAAAAAA GCGCACCCGTCCC GTAAG GAAACGTGTACGC CAATTAAGCCCAGCT LVIS_1730 1685892 - 1684699 - | major facilitator superfamily permease TERM 2109 1684881 - 1684866 - G 79 -3.2 -5.26119 | TTGCTAAAAATAAAA GGCCAA ACAT TCGACC CAAGTAAGCCGGATC LVIS_1731 1686322 - 1685924 - | hypothetical protein LVIS_1732 1686875 - 1686357 - | acetyltransferase TERM 2110 1686973 - 1686948 - R 93 -9.1 -4.45068 | opp_overlap 1686955, overlap 1686955 ATTTGCAACAATAAA CAAAAAAGCGC CACC GCGCTTTTTTT CAGATCAGTGAGACT TERM 2111 1686966 - 1686955 - R 100 -7.2 -5.82036 | opp_overlap 1686955, overlap 1686948 ACAATAAACAAAAAA GCGC CACC GCGC TTTTTTTCAGATCAG TERM 2112 1686955 - 1686966 + r 95 -7.2 -5.44119 | opp_overlap 1686955 1686948 ACAATAAACAAAAAA GCGC CACC GCGC TTTTTTTCAGATCAG LVIS_1733 1687463 - 1686978 - | flavin-nucleotide-binding protein TERM 2113 1687570 - 1687548 - R 100 -14.2 -4.50583 | overlap 1687557 1687559 AAGACTACTATAAAA GGCTAGGAAC AGT GCTCCTAGCC CGGCATTTACGTGTT LVIS_1734 1688172 - 1687585 - | acetyltransferase TERM 2114 1688216 - 1688179 - R 81 -4.4 -5.33785 | gap 2 AATTATCACAAAAAA TCCTCCATT--TCTAGTT CTTT AACCAGACTAACGGAGGA TTACAGGTTTGTCAA LVIS_1735 1689086 - 1688310 - | hypothetical protein TERM 2115 1688346 - 1688369 + g 70 -2.4 -4.96848 | gap 1, overlap 1688350 1688351 ATGGTGAGACTCCCT TCGTGTCGC TGTGGTT GCGGC-CGA TTTTTCTGTCCGCAA TERM 2116 1688351 - 1688392 + g 74 -11 -2.78088 | overlap 1688346 1688350 GAGACTCCCTTCGTG TCGCTGTGGTTGCGG-CCGA TTTT TCTGTCCGCAACT-CAGCGA GTTCTTGGCGAATTT TERM 2117 1688556 - 1688571 + g 75 -10.4 -3.38272 | AGCCATCATGCGATC CCGGTC AGCA GACCGG TTCTGACTCATCATG LVIS_1736 1689978 - 1689094 - | pseudouridylate synthase, 23S RNA-specific TERM 2118 1690017 - 1690063 + r 83 -11.9 -2.73681 | gap 1, opp_overlap 1690012 1690021 1690029 1690034, overlap 1690021 1690029 CATCAATTAATTCGA GTAACCAG-GCAATTGAATCAT CCCG ATGATTCAATTGTTCAGGTTGC TGATTCAGCTGAGTA TERM 2119 1690021 - 1690059 + r 71 -9.1 -3.27774 | gap 1, opp_overlap 1690021 1690012 1690029 1690034, overlap 1690017 1690029 AATTAATTCGAGTAA CCAG-GCAATTGAATCAT CCCG ATGATTCAATTGTTCAGG TTGCTGATTCAGCTG LVIS_1737 1690314 - 1689997 - | glycine cleavage system H protein (lipoate-binding) TERM 2120 1690029 - 1690050 + g 74 -8.9 -3.68936 | opp_overlap 1690021 1690012 1690029 1690034, overlap 1690021 1690017 CGAGTAACCAGGCAA TTGAATCAT CCCG ATGATTCAA TTGTTCAGGTTGCTG LVIS_1738 1690446 - 1690646 + | hypothetical protein TERM 2121 1690677 - 1690704 + T 95 -7.8 -4.98531 | gap 1, opp_overlap 1690677 CCTGTACACGAAAAA GTTGTGACC-CTT TAA GGGTGGTCACAAC TTTTTAATTTCCACC TERM 2122 1690704 - 1690677 - T 85 -7.1 -4.8048 | opp_overlap 1690677 CCTGTACACGAAAAA GTTGTGACC CTTTAAGGGT GGTCACAAC TTTTTAATTTCCACC TERM 2123 1691043 - 1691085 + T 100 -10.7 -4.29508 | opp_overlap 1691043 ATTGATTATTCAAAA GGCCTAACCACTTCAGT ACCTCATAC GCTGAAGTGGCTAGGTC TTTCTTAATGTCCGT TERM 2124 1691085 - 1691043 - T 88 -10 -4.21462 | opp_overlap 1691043 ATTGATTATTCAAAA GGCCTAACCACTTCAG TACCTCATACG CTGAAGTGGCTAGGTC TTTCTTAATGTCCGT LVIS_1739 1691676 - 1691113 - | acetyltransferase TERM 2125 1691706 - 1691737 + r 79 -8 -4.323 | opp_overlap 1691687 1691706 1691736, overlap 1691736 CTTTCGTTAAAAAAA TGGCTGTGATTGCT CGCC GGCAACCACAACCA TTTTAAATGTTTAGC TERM 2126 1691737 - 1691706 - R 100 -11.7 -5.40072 | opp_overlap 1691706 1691736, overlap 1691687 1691736 CTTTCGTTAAAAAAA TGGCTGTGATTGC TCGCCG GCAACCACAACCA TTTTAAATGTTTAGC LVIS_1740 1693177 - 1691753 - | L-arabinose isomerase araD 1693954 - 1693226 - | L-ribulose-5-phosphate 4-epimerase TERM 2127 1694017 - 1693987 - R 73 -9.8 -3.03124 | gap 1, opp_overlap 1694009 TCTTAGTCGCTAATA GCTTCGCCAGCGG CAGCTT CCACTGGC-AAGC CGGCTTGGTAATTCT LVIS_1742 1695575 - 1693974 - | L-ribulokinase (putative) LVIS_1743 1697004 - 1695607 - | D-xylose proton-symporter TERM 2128 1697356 - 1697323 - R 91 -7.5 -5.252 | opp_overlap 1697323 1697318 CATGTGTACAAAAAA CGCCTATGCACTA ATTCATTA CAGCGCATAGACG TTTTATATTAATTAT LVIS_1744 1698420 - 1697368 - | transcriptional regulator LVIS_1745 1699206 - 1698607 - | galactoside O-acetyltransferase LVIS_1746 1700209 - 1699319 - | transcriptional regulator TERM 2129 1700450 - 1700426 - H 76 -7.9 -4.16943 | overlap 1700430 GGGTAGATTGTAAAA TTAATCCGAAC GCT GTTCGGACAAA AAAGATCAGCTTCCT TERM 2130 1700446 - 1700430 - H 84 -10.9 -3.68767 | overlap 1700426 AGATTGTAAAATTAA TCCGAAC GCT GTTCGGA CAAAAAAGATCAGCT TERM 2131 1700454 - 1700508 + H 75 -6 -4.5954 | gap 2, opp_overlap 1700454 TGTTCGGACAAAAAA GATCAGCTTCCTTTAAAATGGTGTTT ACCAC AAAC-CCATCTTTTAGGA-GCTGATC TTTTGTCTAGTATAA TERM 2132 1700508 - 1700454 - H 100 -8.9 -5.24129 | gap 2, opp_overlap 1700454 TGTTCGGACAAAAAA GATCAGCTTCCTTTAAAATGGTGTTTA CCA CAAAC-CCATCTTTTAGGA-GCTGATC TTTTGTCTAGTATAA TERM 2133 1701311 - 1701334 + G 77 -10.4 -3.53343 | TCCTAAAGGGACTCG TTTTGAGCAC ATTA GTGCTCAAGA TTTAACGACGACGTT LVIS_1747 1700511 - 1701440 + | IS30 family transposase TERM 2134 1701549 - 1701522 - g 72 -10.6 -2.92293 | overlap 1701526 AAGCTCAAGACTATA TCAACCCACTGA TTGT CCAGCGGGCTGA CCCCTATATTTATAA LVIS_1748 1701500 - 1702480 + | Beta-xylosidase TERM 2135 1702570 - 1702582 + G 70 -7.7 -3.93256 | ACTTCTTCATTTGGG CCGTT GTT AACGG TTATTTAACCCTCTG LVIS_1749 1702494 - 1703783 + | Na+/melibiose symporter related transporter TERM 2136 1703805 - 1703826 + F 91 -8 -4.82901 | opp_overlap 1703805 TGCGACACTCATTAA GGAGTCCT CTCAGT AGGGCTCC TTTTTCTAAAGGAGG TERM 2137 1704209 - 1704195 - g 74 -2.7 -5.10497 | AATGGACGCAAAAAA CTGGC ACACG GCCTG ACATGGCTGTTAACC LVIS_1750 1703849 - 1705339 + | Alpha-L-arabinofuranosidase TERM 2138 1705371 - 1705347 - T 100 -16.5 -4.30014 | opp_overlap 1705347 CTCATTAATTCAAAA CACGCGACCGA CTA TCGATCGCGTG TTTTTTAGTCCATAT TERM 2139 1705347 - 1705371 + T 100 -14.3 -5.17353 | opp_overlap 1705347 CTCATTAATTCAAAA CACGCGACCGA CTA TCGATCGCGTG TTTTTTAGTCCATAT LVIS_1751 1707151 - 1705376 - | superfamily II DNA helicase TERM 2140 1707272 - 1707240 - R 100 -15.7 -3.22298 | opp_overlap 1707237 1707233 1707232 TTCAGCGATCATTAA CCTCGTAAGCCGGAT ATT ATCTGACTTACGAGG TACTGCCTTTGGGCG TERM 2141 1707350 - 1707323 - R 82 -7.7 -4.43213 | opp_overlap 1707323 TTGAAGACACGAAAA GGAGTCTGGAA GTTTTA TCCCCGACTCC GTTCTTCACATATTT LVIS_1752 1707830 - 1707408 - | transcriptional regulator LVIS_1753 1707971 - 1708546 + | dinucleotide-binding protein TERM 2142 1708570 - 1708609 + F 100 -14.4 -5.34309 | opp_overlap 1708570 TTAAAATCCCCAAGA CCCGGTTCTTTTAGCAGG CATT CCTGTTAAAGGGAGCGGG TTTTTATTTAGTCAT LVIS_1754 1708736 - 1710139 + | dipeptidase TERM 2143 1710164 - 1710201 + T 100 -19.3 -4.46493 | opp_overlap 1710164 1710170, overlap 1710170 CAACTCTATTTTAAA TACAAAGCGTCCAGGAC TTAT GCCCTGGGCGCTTTGTA TTTTCGTGTATTTGG TERM 2144 1710201 - 1710164 - T 100 -19.3 -3.61103 | opp_overlap 1710164 1710170, overlap 1710170 CAACTCTATTTTAAA TACAAAGCGTCCAGGAC TTAT GCCCTGGGCGCTTTGTA TTTTCGTGTATTTGG TERM 2145 1710195 - 1710170 - T 100 -12.5 -4.33928 | opp_overlap 1710170 1710164, overlap 1710164 TATTTTAAATACAAA GCGTCCAGGAC TTAT GCCCTGGGCGC TTTGTATTTTCGTGT TERM 2146 1710170 - 1710195 + T 100 -12.5 -4.49352 | opp_overlap 1710164 1710170, overlap 1710164 TATTTTAAATACAAA GCGTCCAGGAC TTAT GCCCTGGGCGC TTTGTATTTTCGTGT LVIS_1755 1711672 - 1710230 - | amino acid transporter TERM 2147 1712027 - 1712004 - R 100 -14 -5.22943 | opp_overlap 1712004 1712007 ATGAAACGCAAAAAA GAACCTAGAC CATC GTCTAGGTTC TTCGTCACTTACATA TERM 2148 1712004 - 1712027 + r 100 -14 -3.22388 | opp_overlap 1712004, overlap 1712007 ATGAAACGCAAAAAA GAACCTAGAC CATC GTCTAGGTTC TTCGTCACTTACATA TERM 2149 1712007 - 1712024 + r 84 -9.9 -3.75105 | opp_overlap 1712004, overlap 1712004 AAACGCAAAAAAGAA CCTAGAC CATC GTCTAGG TTCTTCGTCACTTAC TERM 2150 1712064 - 1712083 + r 74 -4.9 -4.87626 | overlap 1712065 TGGACGACTTGTGCC ACCGCAG CATTCA CTGCGGC TTTTTCATCTTCAAC TERM 2151 1712065 - 1712082 + r 71 -8.4 -3.51853 | overlap 1712064 GGACGACTTGTGCCA CCGCAG CATTCA CTGCGG CTTTTTCATCTTCAA LVIS_1756 1714579 - 1712045 - | aminopeptidase N TERM 2152 1714620 - 1714677 + r 100 -17.6 -2.75865 | gap 2, opp_overlap 1714621 1714625, overlap 1714625 TATCTACATTATACG ACAAACTAGGGTAAATATGAG--AATGG TTTG CCATTTTCTCATATTTACCCTAGTTTGG TAGCTTATTTTAAAA TERM 2153 1714676 - 1714621 - R 100 -21.1 -2.68612 | gap 2, opp_overlap 1714620 1714625, overlap 1714625 ATCTACATTATACGA CAAACTAGGGTAAATATGAG--AATGG TTTG CCATTTTCTCATATTTACCCTAGTTTG GTAGCTTATTTTAAA TERM 2154 1714625 - 1714672 + r 100 -16.1 -3.82531 | gap 2, opp_overlap 1714625 1714621, overlap 1714620 ACATTATACGACAAA CTAGGGTAAATATGAG--AATGG TTTG CCATTTTCTCATATTTACCCTAG TTTGGTAGCTTATTT TERM 2155 1714672 - 1714625 - R 100 -16.1 -4.0348 | gap 2, opp_overlap 1714620 1714625, overlap 1714621 ACATTATACGACAAA CTAGGGTAAATATGAG--AATGG TTTG CCATTTTCTCATATTTACCCTAG TTTGGTAGCTTATTT LVIS_1757 1715135 - 1714737 - | hypothetical protein TERM 2156 1715159 - 1715191 + r 100 -13 -4.21676 | CCTCCTTGGGTTAGC TGTGATATTCTTAC TAATT GTAAGGATATCACA TTTTCAATAAATTCT LVIS_1758 1717423 - 1715210 - | Alpha-galactosidase TERM 2157 1717580 - 1717553 - R 100 -8.5 -5.69473 | opp_overlap 1717553 CATACTACAAAAAAA GCCACCTAAAC TAAATT GCTTAGATGGC TTCTTTACATGAATT guaA 1719171 - 1717606 - | bifunctional GMP synthase/glutamine amidotransferase protein LVIS_1760 1719834 - 1719256 - | hypothetical protein LVIS_1761 1720770 - 1719847 - | pantothenate kinase TERM 2158 1720145 - 1720130 - G 73 -3.2 -4.85433 | ACATAAATTGAAAAA TCGGTG AAAT CACTGA CATAAATTTGCTCGT TERM 2159 1721154 - 1721110 - R 89 -11.8 -3.40403 | opp_overlap 1721117, overlap 1721113 GCGCTCTTAGGATAA GAC-CGAGCTTTAAGCCAAG TGCCTTG CTTGGCTTAAAG-TCGTGTC CGGTACGTTCCAGCC TERM 2160 1721150 - 1721113 - R 86 -12.3 -2.56271 | gap 1, opp_overlap 1721117, overlap 1721110 CTCTTAGGATAAGAC CGAGCTTTAAGCCAAG TGCCTTG CTTGGCTTAAAG-TCG TGTCCGGTACGTTCC TERM 2161 1721117 - 1721147 + r 95 -14.2 -2.63715 | opp_overlap 1721113 1721110 TAGGATAAGACCGAG CTTTAAGCCAAGTG CCT TGCTTGGCTTAAAG TCGTGTCCGGTACGT TERM 2162 1721280 - 1721318 + r 74 -6.8 -4.26903 | opp_overlap 1721280 TGCTTTAATAAAAAA CTAGGATAGCCAGAAC ACAAACC GTTCTGATTACCCTAG TTTTAATCACCTAAA TERM 2163 1721318 - 1721280 - R 100 -9.7 -5.4505 | opp_overlap 1721280 TGCTTTAATAAAAAA CTAGGATAGCCAGAACA CAAAC CGTTCTGATTACCCTAG TTTTAATCACCTAAA LVIS_1762 1723623 - 1721329 - | superfamily I DNA/RNA helicase TERM 2164 1724368 - 1724380 + H 70 -7.7 -3.71284 | CTCTTCAAGGACCCA TGGCT AGC AGCCA TTATCTTCATGACCA LVIS_1764 1725867 - 1726517 + | phosphoglycerate mutase family protein TERM 2165 1726601 - 1726574 - T 100 -10.6 -5.33405 | opp_overlap 1726574 GTGAGCAAATAAAAA CAGTCATTGCCC AATC GGACGATGACTG TTTTTGGATTACTTC TERM 2166 1726574 - 1726601 + T 100 -10.6 -4.77896 | opp_overlap 1726574 GTGAGCAAATAAAAA CAGTCATTGCCC AATC GGACGATGACTG TTTTTGGATTACTTC LVIS_1765 1727569 - 1726610 - | ABC-type oligopeptide transport system, ATPase component LVIS_1766 1728669 - 1727569 - | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component LVIS_1767 1729708 - 1728683 - | ABC-type dipeptide/oligopeptide/nickel transport system, permease component LVIS_1768 1730649 - 1729720 - | ABC-type dipeptide/oligopeptide/nickel transport system, permease component TERM 2167 1730096 - 1730083 - G 70 -8.1 -3.85698 | overlap 1730087 TTCGGTTCGCACAAA CCGAG CGGA CTCGG CTAATGGTGTTGCGG TERM 2168 1730792 - 1730753 - R 80 -11.6 -2.63252 | overlap 1730759 AGCCTGCAATAACAT CGAAAAGTAAGGACCAAC TCCC GTTAATCCTTACTCCCCG GTAAGACTTATTTAG TERM 2169 1730786 - 1730759 - R 93 -10 -4.32048 | overlap 1730753 CAATAACATCGAAAA GTAAGGACCAAC TCCC GTTAATCCTTAC TCCCCGGTAAGACTT LVIS_1769 1732471 - 1730846 - | ABC-type oligopeptide transport system, periplasmic component TERM 2170 1732748 - 1732796 + r 88 -12.7 -2.60723 | opp_overlap 1732760, overlap 1732760 TCAGACAGACATCGT CATTAATAAAAAGATCCGAGACA CCT TGTCTCGAATCTTTTTATCAGCG CTTCGTTGAACGTGC TERM 2171 1732760 - 1732784 + r 100 -11.5 -4.84017 | opp_overlap 1732760, overlap 1732748 CGTCATTAATAAAAA GATCCGAGACA CCT TGTCTCGAATC TTTTTATCAGCGCTT TERM 2172 1732784 - 1732760 - R 100 -13.7 -5.1356 | opp_overlap 1732760 1732748 CGTCATTAATAAAAA GATCCGAGACA CCT TGTCTCGAATC TTTTTATCAGCGCTT LVIS_1770 1734463 - 1732844 - | ABC-type oligopeptide transport system, periplasmic component TERM 2173 1733009 - 1733020 + g 73 -7.2 -4.21319 | GATTAGATTCTGCCA CCGG GCCG CCGG TTTGTTCGCGTTAGT LVIS_1771 1734685 - 1735962 + | GTPase TERM 2174 1736003 - 1735976 - T 100 -15 -4.86621 | opp_overlap 1735976 AGCCCCAACGAAAAA GCACGTCAGAAA TTAA CTTCTGACGTGC TTTTTGTCTTAAACC TERM 2175 1735976 - 1736003 + T 100 -14.3 -5.0916 | opp_overlap 1735976 AGCCCCAACGAAAAA GCACGTCAGAA ATTAAC TTCTGACGTGC TTTTTGTCTTAAACC LVIS_1772 1736683 - 1736027 - | ABC-type amino acid transport system, permease component LVIS_1773 1737338 - 1736700 - | ABC-type amino acid transport system, permease component LVIS_1774 1738171 - 1737335 - | amino acid ABC transporter periplasmic protein TERM 2176 1737838 - 1737863 + g 77 -6.9 -4.59773 | opp_overlap 1737847 CTGTATTGGTCATCG TGGCAATAATG GCAT CGATATTGCCA TTTTTAAGCATCGGC LVIS_1775 1738931 - 1738191 - | ABC-type polar amino acid transport system, ATPase component TERM 2177 1738989 - 1739006 + r 75 -5.5 -4.90266 | opp_overlap 1738994 GACTAGCGCTCCATA CCAATCC CGTA GGACTGG TTTTTAGTTGCTAAA TERM 2178 1739245 - 1739224 - R 95 -8 -5.14563 | opp_overlap 1739224 GTTCCCAGCAAAAAA GGCCGAGA ACTAAG TCTCAGCC TTTCTGTATTATTCA TERM 2179 1739224 - 1739245 + r 70 -5.8 -4.28067 | opp_overlap 1739224 GTTCCCAGCAAAAAA GGCCGAGA ACTAAG TCTCAGCC TTTCTGTATTATTCA LVIS_1776 1740247 - 1739315 - | hypothetical protein TERM 2180 1739349 - 1739365 + g 70 -9.5 -3.11812 | overlap 1739359 GTCCGTGTCATCGGT TCATCAG TCG CTGATGA TTCAGTGCTATCGGT LVIS_1777 1740813 - 1740268 - | hypothetical protein TERM 2181 1740622 - 1740633 + g 79 -2.2 -5.46657 | ATCCTTTTTCTTGCT GTCA TCGC TGGC TTTTTTCTTCGAATC LVIS_1778 1741346 - 1740888 - | Fe2+/Zn2+ uptake regulation protein TERM 2182 1741015 - 1741005 - G 87 -6.8 -5.03314 | TTGAGCCGTAAAAAA GTCC ATG GGAC ACATCTGTAATTCAA LVIS_1780 1742428 - 1742006 - | NUDIX family hydrolase TERM 2183 1743068 - 1743084 + G 85 -9.5 -4.35461 | CAGTCATGGCACCTA TGGCAAT ATC ATTGCCA TTTTAGTCGTCTTCC LVIS_1781 1742601 - 1743995 + | amino acid transporter TERM 2184 1744459 - 1744433 - g 83 -11.6 -3.48498 | overlap 1744429 AAATGAATTAATGAA TGCGTGGTACGT CTT ACTCACCACGCA CAACAAAACTGGTCA LVIS_1782 1744032 - 1746467 + | x-prolyl-dipeptidyl aminopeptidase LVIS_1783 1746545 - 1747456 + | prolyl aminopeptidase TERM 2185 1747494 - 1747465 - T 100 -9.2 -4.7629 | opp_overlap 1747465 CGATTAATCTAAAAA GCCAACCGACGC TGAAAG GCGATGGTTGGC TTTTTATTTTTGACA TERM 2186 1747465 - 1747494 + T 100 -12.1 -5.61881 | opp_overlap 1747465 CGATTAATCTAAAAA GCCAACCGACGCT GAAA GGCGATGGTTGGC TTTTTATTTTTGACA TERM 2187 1747586 - 1747563 - T 100 -9.6 -5.58454 | opp_overlap 1747581 CTTATAGTAAAAAAA TCGCCACAAC TTTC GCTGTAGCGA TCCCGCTGATTTCTA LVIS_1784 1748198 - 1747599 - | hypothetical protein LVIS_1785 1749856 - 1748300 - | ABC transporter ATPase TERM 2188 1749218 - 1749207 - G 74 -3 -5.02476 | ACATTCTGTAAAAAA TCAT AATC ATGA GAAATGATGAGTGCT TERM 2189 1749892 - 1749908 + H 72 -7.9 -3.78953 | opp_overlap 1749892 CTTACGCAGAAAAAA GCCCGAC AGC GTCAGGC TTTAATCCTAAAACT TERM 2190 1749908 - 1749892 - H 100 -10.1 -5.28176 | opp_overlap 1749892 CTTACGCAGAAAAAA GCCCGAC AGC GTCAGGC TTTAATCCTAAAACT LVIS_1786 1750039 - 1750422 + | lactoylglutathione lyase related lyase TERM 2191 1750689 - 1750655 - g 100 -14.4 -3.94003 | opp_overlap 1750684, overlap 1750644 1750684 ATTACAAAGTAACAA TCCCCGCCACTTTGGT CGT ACCAAATTAACGGGGA CCCGGTTTGGCCAGC LVIS_1787 1750434 - 1751123 + | metal-dependent membrane protease TERM 2192 1751122 - 1751168 + T 100 -19.2 -3.3579 | opp_overlap 1751127 1751130, overlap 1751127 TATTAGCATATCTCT GAAAAGAAGCTTAGAAAATCAG TAT TTGATTTTCTAAGCTTCTTTTA TATTTAACCAACTTT TERM 2193 1751127 - 1751163 + T 100 -19.1 -4.78848 | opp_overlap 1751127 1751130, overlap 1751122 GCATATCTCTGAAAA GAAGCTTAGAAAATCAG TAT TTGATTTTCTAAGCTTC TTTTATATTTAACCA TERM 2194 1751163 - 1751127 - T 100 -18.4 -4.10657 | opp_overlap 1751127 1751122, overlap 1751130 GCATATCTCTGAAAA GAAGCTTAGAAAATCA GTATT TGATTTTCTAAGCTTC TTTTATATTTAACCA TERM 2195 1751160 - 1751130 - T 100 -14.3 -4.17762 | opp_overlap 1751127 1751122, overlap 1751127 TATCTCTGAAAAGAA GCTTAGAAAATCA GTATT TGATTTTCTAAGC TTCTTTTATATTTAA LVIS_1788 1751973 - 1751200 - | ABC-type uncharacterized transport system, ATPase component LVIS_1789 1752871 - 1751906 - | ABC-type uncharacterized transport system, permease component LVIS_1790 1753854 - 1752889 - | ABC-type uncharacterized transport system, periplasmic component TERM 2196 1753924 - 1753891 - R 100 -14.8 -5.47159 | opp_overlap 1753891 TTTAATAAACAAAAA CACCAGATAGATTC AAAGTA GAATCTACCTGGTG TTTTTATCGGGCCCG TERM 2197 1753891 - 1753924 + r 100 -12.6 -4.82901 | opp_overlap 1753891 TTTAATAAACAAAAA CACCAGATAGATTC AAAGTA GAATCTACCTGGTG TTTTTATCGGGCCCG TERM 2198 1754054 - 1754010 - R 77 -10.2 -3.10082 | opp_overlap 1754023 1754038, overlap 1754024 AAAAACTTTAGCTAA TCGATAGATACAAACGCA GTTGTGCGG TGCGTTCGTATCCAGCGA GCTGAACACAAACGC TERM 2199 1754204 - 1754188 - R 73 -5.1 -4.72386 | overlap 1754178 TAAACCATTTAAAAA TGAGGCT GTC AACCCCA ACTTTTAATTTACTT LVIS_1791 1755104 - 1754214 - | hypothetical protein TERM 2200 1754917 - 1754928 + g 71 -4.4 -4.66833 | GAAATCTGTGGAGCG GTTG GTAC CAAC TTTTTAGACTTAGCC TERM 2201 1755272 - 1755228 - H 100 -18.1 -3.40522 | opp_overlap 1755221, overlap 1755266 1755267 ATGCGCTTAGGATAA GACCGGGCTTTAAGCCAAG TGGGTTG CTTTGCTTAAAACCCGGTC CGGTACAATTTACCG TERM 2202 1755295 - 1755266 - H 72 -7.2 -4.07568 | gap 1, opp_overlap 1755221, overlap 1755228 1755267 1755285 TTGCTTTGCTTAAAA CCCGGTC-CGGTA CAATT TACCGCGACCAGA GGACGGGCTTAGCTT TERM 2203 1755594 - 1755618 + H 100 -17.2 -4.84359 | GGTCCTTTTTCTTTG GGGCACCCAG CCGGT CTGGGTGCCC TTTTTGTCGCGATAA LVIS_1792 1755662 - 1756657 + | ABC-type uncharacterized transport system, periplasmic component LVIS_1793 1756654 - 1757556 + | ribose/xylose/arabinose/galactoside ABC-type transporter permease LVIS_1794 1757549 - 1758319 + | ABC-type uncharacterized transport system, ATPase component TERM 2204 1758365 - 1758333 - T 100 -18.6 -5.01732 | opp_overlap 1758333 AAGCCCTTCAAAAAA TGCGTGTCTCGCCA CCAAT TGGCAAGACACGCA TTTTTAACTGTTTTG TERM 2205 1758333 - 1758365 + T 100 -16.4 -4.80396 | opp_overlap 1758333 AAGCCCTTCAAAAAA TGCGTGTCTCGCCA CCAAT TGGCAAGACACGCA TTTTTAACTGTTTTG LVIS_1795 1758581 - 1758384 - | hypothetical protein LVIS_1796 1759539 - 1758673 - | 3-hydroxyisobutyrate dehydrogenase related beta-hydroxyacid dehydrogenase TERM 2206 1759641 - 1759617 - R 100 -11.5 -4.75404 | opp_overlap 1759617 1759614 AAAGGCTATCAAAAA TGGACCACGAA TAA CTCGTAGTCCA TCAATTTAATTCTCT LVIS_1797 1760396 - 1759647 - | hypothetical protein TERM 2207 1760327 - 1760309 - G 71 -3.8 -4.72473 | CCAATGAAAAAATAA TCAGCCAA TCG TCGCCTGA GGTAATCACAGTTTC TERM 2208 1760574 - 1760548 - H 71 -2.2 -5.18357 | CAAGTTATTAAAAAA GTTACCAAAACG CTA CGCTTCTGTTAC CTGTTCGCAACTAAG TERM 2209 1761212 - 1761196 - g 85 -5.9 -5.14563 | GCTGCCAGCAAAAAA TTGTCAC TAA ATGACAA GCTGAGTCGTTACTA LVIS_1798 1760632 - 1761945 + | Beta-lactamase class C related penicillin binding protein TERM 2210 1762007 - 1762052 + T 100 -17.2 -4.16904 | gap 1, opp_overlap 1762013, overlap 1762013 AATTACCTAGCGACA AAT-AAACCCCAACTCGCTGA TTAGT TCAGCGAGTTGGGGTTTCATG TTTATGTGTCATATT TERM 2211 1762045 - 1762013 - T 100 -22.2 -4.57482 | opp_overlap 1762007 1762013 CTAGCGACAAATAAA CCCCAACTCGCTGA TTAGT TCAGCGAGTTGGGG TTTCATGTTTATGTG TERM 2212 1762013 - 1762045 + T 100 -22.2 -4.06185 | opp_overlap 1762013, overlap 1762007 CTAGCGACAAATAAA CCCCAACTCGCTGA TTAGT TCAGCGAGTTGGGG TTTCATGTTTATGTG LVIS_1799 1762677 - 1762054 - | N-acetylmuramidase LVIS_1800 1762792 - 1763781 + | hypothetical protein LVIS_1801 1764755 - 1763778 - | penicillin V acylase related amidase TERM 2213 1764000 - 1764044 + g 100 -13.7 -4.11183 | gap 1, opp_overlap 1764011 ATCTAACAAATGCCA CGCGCTGATAATTCCGGTCG TTTCAT CAACCGGAAT-GTCGGCGCG TTCTTTGTAGTAGGC TERM 2214 1764820 - 1764792 - R 100 -14.5 -4.24404 | opp_overlap 1764790 1764813 1764819 ACGTAAAGGTCAAAA GAGCGGGCACCGC ATC GCGATGACCGCCC CGATCTTTATCCGGT LVIS_1802 1765606 - 1764845 - | 3-oxoacyl-acyl carrier protein reductase LVIS_1803 1765920 - 1765684 - | hypothetical protein TERM 2215 1766704 - 1766714 + G 83 -6.8 -4.90778 | ACTCGTTGCTTTAGT TGCC ATG GGCA TTTTATTTGCCTCAA TERM 2216 1767446 - 1767430 - g 100 -10.9 -4.53034 | opp_overlap 1767429 TTTAGATAATCAAAA CCAACTG TTC CAGTTGG ATAATTTAACCAAGA LVIS_1804 1766123 - 1768885 + | RND superfamily drug exporter TERM 2217 1768928 - 1768896 - T 100 -12.1 -4.77216 | opp_overlap 1768896 AATAATAGGTAAAAA GATCCAGATTCGACA ATA TCTCGAATCGGGATC TTTTTTGTGTCCGGC TERM 2218 1768896 - 1768928 + T 100 -12.1 -5.36441 | opp_overlap 1768896 AATAATAGGTAAAAA GATCCAGATTCGACA ATA TCTCGAATCGGGATC TTTTTTGTGTCCGGC LVIS_1805 1769894 - 1768950 - | IS30 family transposase TERM 2219 1769982 - 1769992 + r 82 -4.6 -5.25976 | GTTAAACATATTCTA CCCG GTA TGGG TTTATTTTTTTACTT LVIS_1806 1771475 - 1770039 - | major facilitator superfamily permease TERM 2220 1770229 - 1770215 - G 100 -11.4 -4.86731 | TCGCCGCAAACAAAA CGGTGG TTG CCACCG AAATACCGATCACCA LVIS_1807 1772014 - 1771478 - | transcriptional regulator TERM 2221 1772125 - 1772151 + r 79 -10.9 -3.22223 | opp_overlap 1772125 CTGACCAACATAAAA GCGAGACAAGC CGTTT GCTTATCTCGC TTACTCATAGCATTC TERM 2222 1772151 - 1772125 - R 100 -13.1 -4.70583 | opp_overlap 1772125 CTGACCAACATAAAA GCGAGACAAGC CGTTT GCTTATCTCGC TTACTCATAGCATTC LVIS_1808 1772635 - 1772165 - | transcriptional regulator TERM 2223 1772863 - 1772877 + G 71 -2.8 -4.86293 | opp_overlap 1772863, overlap 1772858 AGAAAGTTAGTAAAG TAATCG CAT CGATGA TTTTAGTTTTTGTTG LVIS_1809 1772844 - 1773314 + | cell wall-associated hydrolase TERM 2224 1773368 - 1773404 + T 100 -11.1 -5.23292 | gap 1, opp_overlap 1773364 1773368 GAACGTTAAAATTAA TCCGTTGCGGATAAGC ATAGTG GCTTATC-GTAACGGA TTTTCTTTTGTCTCC TERM 2225 1773404 - 1773368 - T 75 -8.9 -3.69437 | gap 1, opp_overlap 1773368, overlap 1773364 GAACGTTAAAATTAA TCCGTTGCGGATAAGC ATAGTG GCTTATC-GTAACGGA TTTTCTTTTGTCTCC TERM 2226 1773435 - 1773469 + T 100 -12.3 -5.09426 | opp_overlap 1773435 AAATATTCTAAAAAA GGTGATCCCGGAATT ATAAC AATTCTGAGATCACC TTTTTTAGAATTGAC TERM 2227 1773469 - 1773435 - T 100 -13 -5.10077 | opp_overlap 1773435 AAATATTCTAAAAAA GGTGATCCCGGAATTA TAA CAATTCTGAGATCACC TTTTTTAGAATTGAC LVIS_1810 1773929 - 1773498 - | acetyltransferase LVIS_1811 1774608 - 1773946 - | phosphoglycerate mutase family protein LVIS_1812 1774843 - 1776975 + | phosphoglycerol transferase/alkaline phosphatase superfamily protein TERM 2228 1776987 - 1777038 + T 100 -14.6 -4.6526 | opp_overlap 1776993, overlap 1776989 1776993 1776996 ATAGACATGACCATT AATAAAGAAGCTGTTCGCTCGATC TCAT GATCTGGCGAACAGCTTCTTTGAG TTTTTAACACTTTGT TERM 2229 1776989 - 1777036 + T 100 -21.6 -2.6212 | opp_overlap 1776993, overlap 1776987 1776993 1776996 AGACATGACCATTAA TAAAGAAGCTGTTCGCTCGATC TCAT GATCTGGCGAACAGCTTCTTTG AGTTTTTAACACTTT TERM 2230 1777032 - 1776993 - T 100 -18 -4.27441 | opp_overlap 1776989 1776987 1776993 1776996 ATGACCATTAATAAA GAAGCTGTTCGCTCGATC TCAT GATCTGGCGAACAGCTTC TTTGAGTTTTTAACA TERM 2231 1776993 - 1777032 + T 100 -20.2 -3.99805 | opp_overlap 1776993, overlap 1776989 1776987 1776996 ATGACCATTAATAAA GAAGCTGTTCGCTCGATC TCAT GATCTGGCGAACAGCTTC TTTGAGTTTTTAACA TERM 2232 1776996 - 1777029 + T 100 -16.1 -4.10717 | opp_overlap 1776993, overlap 1776993 1776989 1776987 ACCATTAATAAAGAA GCTGTTCGCTCGATC TCAT GATCTGGCGAACAGC TTCTTTGAGTTTTTA LVIS_1813 1778050 - 1777055 - | thioredoxin reductase LVIS_1814 1778095 - 1778853 + | alpha/beta hydrolase superfamily protein LVIS_1815 1779881 - 1778838 - | hypothetical protein LVIS_1816 1780050 - 1781006 + | inosine-uridine nucleoside N-ribohydrolase TERM 2233 1781021 - 1781052 + F 100 -9.5 -4.9181 | opp_overlap 1781021 ACTCATTATCAAAAA CCATTGCTCTGCT ATTTAA AGTCGAGCAATGG TTTTTAATATTCTAT TERM 2234 1781052 - 1781021 - f 85 -7.3 -4.77438 | opp_overlap 1781021 ACTCATTATCAAAAA CCATTGCTCTGCT ATTTAA AGTCGAGCAATGG TTTTTAATATTCTAT LVIS_1817 1781147 - 1781494 + | hypothetical protein TERM 2235 1781502 - 1781534 + T 76 -9.3 -3.46169 | opp_overlap 1781508, overlap 1781508 CCGCTTAGGTCCACT AAAAAACACGACC CGTTAAA GGTCGTGTTTTTA TTATGCCTTGTAATT TERM 2236 1781508 - 1781528 + T 100 -8.3 -5.21236 | opp_overlap 1781508, overlap 1781502 AGGTCCACTAAAAAA CACGACC CGTTAAA GGTCGTG TTTTTATTATGCCTT TERM 2237 1781528 - 1781508 - T 100 -9 -5.14965 | opp_overlap 1781508 1781502 AGGTCCACTAAAAAA CACGACCC GTTAA AGGTCGTG TTTTTATTATGCCTT LVIS_1818 1782197 - 1781535 - | hypothetical protein LVIS_1819 1783084 - 1782269 - | HAD superfamily hydrolase TERM 2238 1782990 - 1783013 + g 71 -3.8 -4.69053 | TTAATACCGGCCTCA TGCAATTGGC GCAA GGCGGTTGCA TTTTCTTCGCTGATC LVIS_1820 1783972 - 1783157 - | alpha/beta hydrolase superfamily protein LVIS_1821 1785246 - 1783969 - | cellobiose-specific PTS system IIC component TERM 2239 1785579 - 1785559 - H 82 -6.9 -4.86226 | ACACTAAAAAAATAA TGTTGACTG TTT CAGTAAACA AATGTACACTGTTGC LVIS_1822 1785611 - 1786369 + | DNA-binding response regulator TERM 2240 1786451 - 1786437 - g 88 -8.6 -5.00138 | opp_overlap 1786436 GATTCAAATTAAAAA TGACCA AAC TGGTCA ACTATTTATCGATGC LVIS_1823 1786366 - 1786695 + | hypothetical protein LVIS_1824 1786705 - 1787373 + | chloramphenicol O-acetyltransferase TERM 2241 1787376 - 1787422 + T 100 -17.6 -3.75738 | gap 1, opp_overlap 1787387, overlap 1787387 GTTGACTGCTTAAGG CTAAGTAAAAAGGCTCGCCGC TTAATT GCGACGAGCC-TTTTACTTAG TTGTTCATACTGCTG TERM 2242 1787412 - 1787387 - T 100 -14 -4.87893 | opp_overlap 1787376 1787387 AAGGCTAAGTAAAAA GGCTCGCCGC TTAATT GCGACGAGCC TTTTACTTAGTTGTT TERM 2243 1787387 - 1787412 + T 100 -11.8 -4.52101 | opp_overlap 1787387, overlap 1787376 AAGGCTAAGTAAAAA GGCTCGCCGC TTAATT GCGACGAGCC TTTTACTTAGTTGTT LVIS_1825 1788597 - 1787419 - | D-alanyl-D-alanine carboxypeptidase TERM 2244 1788809 - 1788778 - R 100 -6.6 -5.61596 | overlap 1788780 ATTTCCACAAAAAAA GACGCCACTAAC CCGTATTC GTTAGTGACGAC CTCGATTCATTAAGC TERM 2245 1788807 - 1788780 - R 82 -7.8 -4.45201 | overlap 1788778 TTCCACAAAAAAAGA CGCCACTAAC CCGTATTC GTTAGTGACG ACCTCGATTCATTAA LVIS_1826 1789742 - 1788819 - | D-alanyl-D-alanine carboxypeptidase TERM 2246 1789031 - 1789065 + g 73 -4.5 -4.68994 | gap 2, opp_overlap 1789031, overlap 1789022 TCCGGCCGGCCAAGA GGTTG-TTGT-AGTTGT AAC ACAACTGACCATCAACC TTTTTCGATCCTGCT TERM 2247 1789246 - 1789234 - G 77 -4.8 -5.0065 | opp_overlap 1789234 GAGGCAGAAACAAAA TGGG CTTTC CCCA ATTTCCACGCTTTAG TERM 2248 1790041 - 1790067 + H 100 -8.7 -5.75599 | opp_overlap 1790042, overlap 1790042 TAGACTTATCAATGA ACCCCACTAGG CATGA CTTAGTGGGGA TTTTTTTGTCATTTG TERM 2249 1790066 - 1790042 - H 83 -10.7 -3.41134 | opp_overlap 1790041 1790042 AGACTTATCAATGAA CCCCACTAGGC ATG ACTTAGTGGGG ATTTTTTTGTCATTT TERM 2250 1790042 - 1790066 + H 100 -12.2 -4.02919 | opp_overlap 1790042, overlap 1790041 AGACTTATCAATGAA CCCCACTAGG CATGA CTTAGTGGGG ATTTTTTTGTCATTT LVIS_1827 1790121 - 1790684 + | ABC-type cobalt transport system, permease component LVIS_1828 1790709 - 1792118 + | ABC-type cobalt transport system, ATPase component LVIS_1829 1792115 - 1792768 + | ABC-type cobalt transport system, permease component CbiQ related transporter LVIS_1830 1792793 - 1793446 + | putative transcription activator LVIS_1831 1793525 - 1793890 + | hypothetical protein TERM 2251 1793900 - 1793925 + F 100 -16.9 -4.50859 | opp_overlap 1793902 CATTAATCTTTATTA GAGTCCGGGGC TTGT GCCTCGGACTC TTTGTGTTTTAGTTA TERM 2252 1793923 - 1793902 - f 81 -11.5 -2.79831 | opp_overlap 1793900 TTAATCTTTATTAGA GTCCGGGGC TTGT GCCTCGGAC TCTTTGTGTTTTAGT TERM 2253 1794018 - 1793987 - f 100 -15.2 -4.57073 | opp_overlap 1793991, overlap 1793991 CACTTTTGGCAAAAA GAAACGGGCCAACC CGAA GGCCGACCCGTTTC CCTGCTTGATAAACT TERM 2254 1794014 - 1793991 - f 100 -10.2 -4.85782 | opp_overlap 1793991, overlap 1793987 TTTGGCAAAAAGAAA CGGGCCAACC CGAA GGCCGACCCG TTTCCCTGCTTGATA TERM 2255 1794102 - 1794089 - f 74 -8.1 -4.05629 | overlap 1794098 ATTAAAGTGAAACAA CTGGG CAAA CCCAG CTTCGGGGCGAACAT LVIS_1832 1794592 - 1794783 + | hypothetical protein TERM 2256 1794847 - 1794814 - T 100 -14.1 -4.37198 | gap 1, opp_overlap 1794814 AACTTAAAGCTAAAA GATCCGCGTCAGCTTA ACT TAA-CTGACACGGATC TTTTTTTGCCATTAA TERM 2257 1794814 - 1794847 + T 100 -11.9 -5.47399 | gap 1, opp_overlap 1794814 AACTTAAAGCTAAAA GATCCGCGTCAGCTTA ACT TAA-CTGACACGGATC TTTTTTTGCCATTAA LVIS_1834 1795466 - 1795122 - | hypothetical protein TERM 2258 1795484 - 1795517 + r 91 -13.2 -2.72344 | overlap 1795492 TAAAAACTCCTTATG TAGCGCAACGGGAG ATAACC CTCCCGTTGCGTAA TCGTTACAGATCGCC LVIS_1835 1796684 - 1795521 - | hypothetical protein TERM 2259 1796440 - 1796424 - G 71 -6.5 -4.1711 | opp_overlap 1796416 1796424 ACCAGCTTGAACAAA CTGCTCA TCT TGAGCCG TTTGAATTCGAAAGG TERM 2260 1796643 - 1796658 + g 71 -8.2 -3.71527 | opp_overlap 1796627 GTTGACCAGCAGGTG CTGGGC CAAG GCCCGG TTTAAATCATTCACA LVIS_1836 1797776 - 1796766 - | L-asparaginase LVIS_1837 1797832 - 1797987 + | hypothetical protein TERM 2261 1798182 - 1798202 + F 100 -7.6 -5.79595 | opp_overlap 1798201 TCTAAGTTTTCAGTG GCTCTCTT TTTGC AAGGGAGC TTTTTTGTTTTCAAA TERM 2262 1798789 - 1798773 - g 73 -5.1 -4.59773 | opp_overlap 1798774 1798778, overlap 1798774 TGCCACGGCTAAAAA TTTTGGG GAT CCCAAAT TCCTGTTAATTGGGT LVIS_1838 1798267 - 1799640 + | xanthine/uracil permease TERM 2263 1799692 - 1799654 - f 80 -10.5 -3.41982 | gap 1, opp_overlap 1799654 1799655, overlap 1799655 AAATTCATCAACCAA CCGCGAGTTATC-AGG TTCCTTTT CCTTGATAACTCGCGA TTTTTTTGGCTTCAA TERM 2264 1799654 - 1799692 + F 100 -9.7 -5.53288 | opp_overlap 1799654 1799655, overlap 1799655 AAATTCATCAACCAA CCGCGAGTTATCAGG TTCCTTTTC CTTGATAACTCGCGA TTTTTTTGGCTTCAA TERM 2265 1799655 - 1799691 + F 100 -13.2 -3.90888 | opp_overlap 1799654 1799655, overlap 1799654 AATTCATCAACCAAC CGCGAGTTATCAGG TTCCTTTTC CTTGATAACTCGCG ATTTTTTTGGCTTCA TERM 2266 1799691 - 1799655 - f 83 -11.8 -2.64466 | gap 1, opp_overlap 1799655 1799654, overlap 1799654 AATTCATCAACCAAC CGCGAGTTATC-AGG TTCCTTTT CCTTGATAACTCGCG ATTTTTTTGGCTTCA TERM 2267 1800183 - 1800165 - g 73 -4.5 -4.78572 | opp_overlap 1800165 GGGGAATCAACAAAA GGTGCAG TTAAT CTGTACC TTGATCCATCACCCC LVIS_1839 1799758 - 1800651 + | ABC-type uncharacterized transport system, ATPase component LVIS_1840 1800648 - 1801868 + | ABC-type Na+ efflux pump, permease component TERM 2268 1802116 - 1802137 + T 100 -7.3 -5.60556 | opp_overlap 1802116 GGTGATGGCATTGAA CTGTTAGCT TTCT GGCTAGCAG TTTTTATTTTATCTT TERM 2269 1802189 - 1802167 - T 100 -10.6 -4.82901 | opp_overlap 1802167, overlap 1802184 TTTTCCTCACAAAAA GGGACGCCTA TAA TAGACATCCC TTGATGATTGAACTA LVIS_1842 1803650 - 1802301 - | hypothetical protein LVIS_1843 1804619 - 1803753 - | hypothetical protein TERM 2270 1804639 - 1804664 + H 75 -8.3 -3.7456 | gap 1 CTCGCCTTCCTATCT GCTA-GTGACGC CCA GCGTCCCCTAGC TTTCAATATCCTTAT TERM 2271 1804941 - 1804959 + G 89 -14.6 -2.52464 | opp_overlap 1804933 1804931 ATAAAGACGGCCTTA GATGCCGG CTA CCGGCATC TCGATTGCGCACACA LVIS_1844 1804836 - 1805642 + | aldo/keto reductase TERM 2272 1805709 - 1805675 - f 90 -13.1 -2.50479 | opp_overlap 1805675, overlap 1805671 1805678 CGCAACTAAAACTAG TAAGGACTTCCGA TTAATTGGT TCGGAAGTCCTTA TTTTGATATCACCAG TERM 2273 1805675 - 1805709 + F 100 -13.1 -4.34402 | opp_overlap 1805675 1805671 1805678 CGCAACTAAAACTAG TAAGGACTTCCGA TTAATTGGT TCGGAAGTCCTTA TTTTGATATCACCAG TERM 2274 1805706 - 1805678 - f 78 -10.4 -3.39207 | opp_overlap 1805675, overlap 1805675 1805671 AACTAAAACTAGTAA GGACTTCCGA TTAATTGGT TCGGAAGTCC TTATTTTGATATCAC LVIS_1845 1805814 - 1806182 + | hypothetical protein LVIS_1846 1806194 - 1806556 + | hypothetical protein TERM 2275 1806927 - 1806912 - g 76 -9 -3.92641 | AACGCCATCGATAAA TCCGAG TATC CTCGGA CCGCTGAAATTGAAA LVIS_1847 1806645 - 1808051 + | glutamate decarboxylase TERM 2276 1808128 - 1808081 - T 100 -20.8 -5.31275 | opp_overlap 1808082, overlap 1808082 TCTCATCACAAAAAA GGCTACCGTAACCATCCATGTC AATC GACGTGAATGGTTACGGTAGCT TTTTTTATCAAAATT TERM 2277 1808127 - 1808082 - T 100 -24.3 -3.78042 | opp_overlap 1808082, overlap 1808081 CTCATCACAAAAAAG GCTACCGTAACCATCCATGTC AATC GACGTGAATGGTTACGGTAGC TTTTTTTATCAAAAT TERM 2278 1808082 - 1808127 + T 100 -24.3 -5.61596 | opp_overlap 1808082 1808081 CTCATCACAAAAAAG GCTACCGTAACCATCCATGTC AATC GACGTGAATGGTTACGGTAGC TTTTTTTATCAAAAT LVIS_1848 1808828 - 1808142 - | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase LVIS_1849 1809034 - 1810314 + | hypothetical protein LVIS_1850 1810317 - 1811078 + | NCAIR mutase (PurE)-related protein TERM 2279 1811388 - 1811368 - g 78 -12.5 -2.60725 | overlap 1811367 GCAAAGTACATTAAC CCCCGCCGT TAA ACGGCGGGC CACTGCGCTGTTTGA LVIS_1851 1811075 - 1812307 + | hypothetical protein TERM 2280 1812791 - 1812779 - g 76 -9.1 -3.87815 | opp_overlap 1812777 GCCGACCTCTATAAA CGCGA GGT TCGCG AATTGGCTCAAAGCT TERM 2281 1813039 - 1813028 - g 74 -3 -5.0925 | overlap 1813022 GCTCAAAATGAAAAA GTTT CTGA AAAC TTGCGCCAGTTGGGG LVIS_1852 1812314 - 1813150 + | PP family ATPase LVIS_1853 1813158 - 1813880 + | glycerol uptake facilitator related permease (major Intrinsic protein family) TERM 2282 1813906 - 1813936 + F 91 -5.3 -5.61881 | opp_overlap 1813906 1813909, overlap 1813925 GTTATTTTTGAAAAA GTAGGTCGCCCGG CTTTA TCAGGCAACCTGC TTTTTGTTTTTAGAA TERM 2283 1813936 - 1813906 - f 79 -6.8 -4.58395 | opp_overlap 1813906 1813925, overlap 1813909 GTTATTTTTGAAAAA GTAGGTCGCCCG GCTTTAT CAGGCAACCTGC TTTTTGTTTTTAGAA LVIS_1854 1813967 - 1814950 + | high-affinity nickel permease TERM 2284 1814961 - 1814990 + F 86 -5.7 -5.36314 | AATAGAACTGGAAGA CGCCACTCGGT AAGTTAAG ATTGGGTGGCG TTTTTTGGTATTTTC LVIS_1857 1816016 - 1816264 + | acetyltransferase TERM 2285 1816450 - 1816476 + T 100 -16.8 -4.55118 | opp_overlap 1816450 ACTGACTAGTAAAAA GGACGAGAAAAT CGG ATTTTCTCGTCC TTTTATATGGCATTA TERM 2286 1816476 - 1816450 - T 100 -16.8 -4.77438 | opp_overlap 1816450 ACTGACTAGTAAAAA GGACGAGAAAAT CGG ATTTTCTCGTCC TTTTATATGGCATTA LVIS_1858 1816726 - 1816502 - | hypothetical protein TERM 2287 1816747 - 1816778 + H 100 -14.5 -4.90266 | opp_overlap 1816747 CCTATTAATTAAAAA TGGACGCGGCCCT CATACC AGGGTCGTGTCCA TTTTTAGTTGGTACG TERM 2288 1816778 - 1816747 - H 100 -10.1 -4.90266 | opp_overlap 1816747 CCTATTAATTAAAAA TGGACGCGGCCCT CATACC AGGGTCGTGTCCA TTTTTAGTTGGTACG TERM 2289 1817175 - 1817191 + G 71 -2.9 -4.86731 | overlap 1817168 TGCCGGCTTCACTGA TGCTACC ACC GGTGACA TTTTATTTGCCGGGA LVIS_1859 1817008 - 1818120 + | ABC-type spermidine/putrescine transport system, ATPase component LVIS_1860 1818098 - 1818922 + | spermidine/putrescine ABC transporter permease protein TERM 2290 1818945 - 1818955 + G 73 -2.4 -5.10601 | ATTCACCCGACTTTA CCTC ATC GTGG TTTTTATCATTTTGT LVIS_1861 1818919 - 1819722 + | spermidine/putrescine ABC transporter permease protein LVIS_1862 1819719 - 1820789 + | spermidine/putrescine-binding periplasmic protein TERM 2291 1820824 - 1820802 - T 100 -19.2 -4.84274 | opp_overlap 1820802 TAAGTACACGAAAAA GGCTGTGGGC ACT GCCCACAGCC TTTTTGACTAACCAA TERM 2292 1820802 - 1820824 + T 100 -19.2 -4.65895 | opp_overlap 1820802 TAAGTACACGAAAAA GGCTGTGGGC ACT GCCCACAGCC TTTTTGACTAACCAA LVIS_1863 1821635 - 1820832 - | ABC-type phosphate transport system, ATPase component LVIS_1864 1822538 - 1821648 - | ABC-type phosphate transport system, permease component TERM 2293 1821943 - 1821919 - G 71 -6.3 -4.13995 | GCTGTATAAATCAAA GCCGCGGCTTC ACC AAAGACCCGGC CGGCACTCAATACCA LVIS_1865 1823481 - 1822528 - | ABC-type phosphate transport system, permease component TERM 2294 1823532 - 1823506 - R 89 -6.6 -5.40072 | CCCCCTTTAAAAAAA GTGAAGATGC GCTAATT GCACCTCCAC CCGTTGCCTACTAGA LVIS_1866 1824441 - 1823551 - | ABC-type phosphate transport system, periplasmic component LVIS_1867 1824722 - 1825072 + | hypothetical protein TERM 2295 1825090 - 1825112 + T 100 -17.8 -5.00138 | opp_overlap 1825090 GACAAACACAAAAAA GACGTGAGGG CAG CCCTCACGTC TTTTTCGTTTCACTA TERM 2296 1825112 - 1825090 - T 100 -17.8 -5.59879 | opp_overlap 1825090 GACAAACACAAAAAA GACGTGAGGG CAG CCCTCACGTC TTTTTCGTTTCACTA LVIS_1868 1825332 - 1825129 - | hypothetical protein LVIS_1869 1825666 - 1825403 - | phosphotransferase system, HPr-related protein LVIS_1870 1825819 - 1828185 + | Rad3-related DNA helicase TERM 2297 1828690 - 1828675 - g 73 -7.6 -4.08692 | opp_overlap 1828675 1828674 CAACTGGGCTCAAAA CGTTCA GTAC TGAACG CTTGTATCAGGAACT TERM 2298 1828731 - 1828713 - g 73 -2.4 -5.17576 | CAGGAACTCAAAAAA CGCCAT CAACACT ATGACG TCTATGATCCAGAAG LVIS_1871 1828182 - 1828874 + | hypothetical protein TERM 2299 1828999 - 1829016 + G 81 -11.3 -3.73224 | opp_overlap 1828989 AGATATTCGGGCATT GCCGCAA ACCG TTGCGGC TTTCATGGCAGCTAA LVIS_1872 1828871 - 1829788 + | hypothetical protein LVIS_1873 1831616 - 1830027 - | ABC-type multidrug transport system, ATPase and permease component TERM 2300 1831334 - 1831344 + g 75 -5.4 -4.72986 | CAACTCTATTAATTC CATC AAT GATG TTTTTGGTAAAGATG LVIS_1874 1832629 - 1831709 - | IS30 family transposase TERM 2301 1832430 - 1832400 - G 70 -7.7 -3.91084 | gap 1 TGATTGGTAATTAAA GTCGCT-AATGCTG CCGT CAGCATCGAACGAC GACCGCAATTCCGCC TERM 2302 1832524 - 1832547 + g 91 -13.2 -3.40639 | gap 1 AGCTAATCGTAGCTT TGGC-GACGCC TAA GGCGTCAGCCA TTACTTGGTAAGATT LVIS_1875 1835262 - 1832710 - | Serine/threonine protein kinase TERM 2303 1832821 - 1832831 + g 80 -6.8 -4.7033 | opp_overlap 1832821 TTCTGACAGTAACAA GGCT ACA AGCC TTTTCTGTTCAATTA LVIS_1876 1835412 - 1835597 + | hypothetical protein TERM 2304 1835707 - 1835671 - T 100 -14.6 -4.08948 | gap 1, opp_overlap 1835671 TAATTTCACAAATAA GAGTGTCTCGCCCATAG CGAT CTGTGGG-GAGACACTC TTTATTTGTGAAATT TERM 2305 1835671 - 1835707 + T 100 -16.8 -4.56969 | gap 1, opp_overlap 1835671 TAATTTCACAAATAA GAGTGTCTCGCCCATAG CGAT CTGTGGG-GAGACACTC TTTATTTGTGAAATT TERM 2306 1836106 - 1836072 - T 100 -13.7 -3.20164 | opp_overlap 1836078, overlap 1836078 TCAGATGTAACGTAA CAAAAAGCCCGAGAC CAATT GTCTCGAGCTTTTGG CGTAACAAACTAGCA TERM 2307 1836078 - 1836100 + T 83 -9.1 -4.13767 | opp_overlap 1836072 1836078 GTAACGTAACAAAAA GCCCGAGAC CAATT GTCTCGAGC TTTTGGCGTAACAAA TERM 2308 1836100 - 1836078 - T 100 -11.3 -5.13741 | opp_overlap 1836078, overlap 1836072 GTAACGTAACAAAAA GCCCGAGAC CAATT GTCTCGAGC TTTTGGCGTAACAAA LVIS_1877 1837172 - 1836129 - | 3-carboxymuconate cyclase LVIS_1878 1837316 - 1837762 + | hypothetical protein TERM 2309 1837808 - 1837766 - T 100 -21.5 -4.93316 | opp_overlap 1837766 CAACAACACTAAAAA TAGCCACCATCCTCGGTAG TGAAT CTGCCGAGGATAGTGGCTA TTTACTTGCATGGCT TERM 2310 1837766 - 1837808 + T 100 -21.5 -3.93556 | opp_overlap 1837766 CAACAACACTAAAAA TAGCCACCATCCTCGGTAG TGAAT CTGCCGAGGATAGTGGCTA TTTACTTGCATGGCT LVIS_1879 1839412 - 1837823 - | amino acid transporter TERM 2311 1839074 - 1839050 - G 73 -5.6 -4.56597 | gap 1, overlap 1839052 CCCGTGCCGCAAAAA GCCGCGGGTCC AATT GG-CCCACGCC CACGGCCAAGAGCTC TERM 2312 1839315 - 1839298 - G 71 -8.4 -3.71156 | opp_overlap 1839296 AAATCCAAGAGATAA TCGCCG CCGGTC CGGCGA TCTGGGTTGCCATCC LVIS_1880 1840204 - 1839497 - | hypothetical protein LVIS_1881 1840906 - 1840217 - | hypothetical protein LVIS_1882 1841176 - 1841667 + | Fe2+/Zn2+ uptake regulation protein TERM 2313 1841678 - 1841704 + F 86 -6.6 -5.00884 | gap 1, opp_overlap 1841668 AGTAACCATTACGCA CAGGTCG-CCG ACGCAA CGGACGATCTG TTTTTTGCGCGCACT LVIS_1883 1841995 - 1843059 + | N-acetylmuramoyl-L-alanine amidase TERM 2314 1843066 - 1843089 + T 91 -7.4 -5.33026 | opp_overlap 1843066 1843060, overlap 1843068 AGTAACTAATAATGA CCGTCTAACG ATTA CGTTAGGCAG TTTTTATTTAGGTTG TERM 2315 1843133 - 1843168 + T 70 -9.2 -2.77787 | opp_overlap 1843138, overlap 1843138 TTTCTAATTCCACAT AAAAAGCGTTAGGA CGTGTATC TCCTAACGCTTTTC GTTTACGATAATCTT TERM 2316 1843163 - 1843138 - T 100 -9.1 -4.98522 | opp_overlap 1843133 1843138 AATTCCACATAAAAA GCGTTAGGA CGTGTATC TCCTAACGC TTTTCGTTTACGATA TERM 2317 1843138 - 1843163 + T 93 -9.1 -4.55798 | opp_overlap 1843138, overlap 1843133 AATTCCACATAAAAA GCGTTAGGA CGTGTATC TCCTAACGC TTTTCGTTTACGATA LVIS_1884 1843919 - 1843185 - | hypothetical protein LVIS_1885 1844746 - 1843964 - | multitransmembrane protein LVIS_1886 1845858 - 1844743 - | multitransmembrane protein LVIS_1887 1846085 - 1846201 + | hypothetical protein TERM 2318 1846251 - 1846225 - T 100 -11.7 -4.72846 | opp_overlap 1846225 CCATATACGTAAAAA TGCACTGACAA GTTAA TTGCCAGTGCA TTTTTGTTTGCTTTT TERM 2319 1846225 - 1846251 + T 100 -9.5 -5.43974 | opp_overlap 1846225 CCATATACGTAAAAA TGCACTGACAA GTTAA TTGCCAGTGCA TTTTTGTTTGCTTTT LVIS_1888 1846757 - 1846272 - | UspA family nucleotide-binding protein LVIS_1889 1846915 - 1847799 + | hypothetical protein TERM 2320 1847854 - 1847818 - f 77 -10.3 -3.16267 | opp_overlap 1847819 1847820, overlap 1847849 TCTAACCATACTCAA GCGGGCTATTCAGTA TATCAAT TACTGAATAGCCCAT TTTGGGGTTACAGCA TERM 2321 1847819 - 1847853 + F 100 -11.6 -4.19238 | opp_overlap 1847818 1847849, overlap 1847820 CTAACCATACTCAAG CGGGCTATTCAGTA TATCAAT TACTGAATAGCCCA TTTTGGGGTTACAGC TERM 2322 1847820 - 1847852 + F 100 -15.1 -3.11222 | opp_overlap 1847818 1847849, overlap 1847819 TAACCATACTCAAGC GGGCTATTCAGTA TATCAAT TACTGAATAGCCC ATTTTGGGGTTACAG LVIS_1890 1848050 - 1848553 + | transcriptional regulator TERM 2323 1848559 - 1848586 + F 100 -17.1 -4.36262 | opp_overlap 1848556 1848555 TGGTCACTAAAGCTT GGAGGGCTGAG ATGCAA CTCAGCCCTCC TTTTCGTGTCAGTAT LVIS_1891 1848690 - 1850645 + | neutral endopeptidase TERM 2324 1850721 - 1850760 + T 100 -15.8 -3.44325 | opp_overlap 1850721 CCCTTTATATCAAAA GGCTGTCCCATGAGAATC CAAA GGTTCCCATTGGACAGCC TTAGTTATAGCGACT TERM 2325 1850760 - 1850721 - T 100 -16.6 -4.34402 | gap 1, opp_overlap 1850721 CCCTTTATATCAAAA GGCTGTCCCATGAGAATCC AAA GG-TTCCCATTGGACAGCC TTAGTTATAGCGACT LVIS_1892 1851025 - 1850900 - | hypothetical protein LVIS_1893 1851530 - 1851168 - | hypothetical protein LVIS_1894 1852433 - 1851540 - | hypothetical protein TERM 2326 1852258 - 1852268 + g 83 -4 -5.48514 | opp_overlap 1852258 TGTTTTTGAAACATA GTAA AAG TTAC TTTTTGTTTATTAAT LVIS_1895 1854959 - 1852446 - | hypothetical protein TERM 2327 1855554 - 1855516 - R 100 -19.9 -3.889 | opp_overlap 1855516 GGCAACCACACTAAA TAGACTTCCCAAGAATC TTAAC GATTCCTGGGAAGTCTA TTTGCGTTACCTTTC TERM 2328 1855516 - 1855554 + r 100 -17.7 -3.79481 | opp_overlap 1855516 GGCAACCACACTAAA TAGACTTCCCAAGAATC TTAAC GATTCCTGGGAAGTCTA TTTGCGTTACCTTTC LVIS_1897 1856116 - 1855583 - | hypothetical protein TERM 2329 1856232 - 1856207 - R 100 -14.1 -4.24204 | TATTTATAGGCAAAA CCCCTACAACC AGTT GGTTATAGGGG CCTCATCAATTTAAA LVIS_1898 1858519 - 1856270 - | ribonucleotide reductase, alpha subunit TERM 2330 1857743 - 1857755 + g 83 -6.3 -4.8543 | ATCGCTAATGTCTAA GACAA CCT TTGTC TTTTTCTCAGGATTC TERM 2331 1858929 - 1858894 - R 71 -3.2 -4.98531 | opp_overlap 1858894 1858913 1858914 1858922, overlap 1858895 1858896 GTCGTAAATCAAAAA TCGCCACAAGCTGG TGATATTG CCAACCCGTGGCAG TTACTTTTGCAACGC TERM 2332 1858939 - 1858969 + r 73 -9.8 -2.92475 | overlap 1858922 1858938 TGGCAGTTACTTTTG CAACGCTTGATCTT TTG AATATCCAGCGTTG ATTTATCCAACTAAA TERM 2333 1859006 - 1858988 - R 75 -2.4 -5.28481 | TATCCAACTAAAAAA GATGATCA TTA TAGTCATC TACCGGTTTTCATCT LVIS_1899 1859191 - 1859006 - | hypothetical protein TERM 2334 1859586 - 1859560 - R 95 -8 -5.07275 | CTATATATATAAAAA GTGAGGACTG ATTGCGA CAGCCCCCAC AAGTTCGCAAGTTCA TERM 2335 1859623 - 1859644 + r 91 -6.6 -5.4251 | opp_overlap 1859623 GTAAAAATGGATAAA GCTACTTC TTAATT GAAGTGGC TTTTTTGTATATCAG LVIS_1900 1859728 - 1859624 - | hypothetical protein TERM 2336 1860154 - 1860184 + r 100 -15.5 -4.77896 | opp_overlap 1860154 TCACTAACACAAAAA CGACACCCTTCCC AACTA GGAAAGGGTGTCG TTTTTGCGTTAATTC TERM 2337 1860184 - 1860154 - R 100 -17.7 -5.1244 | opp_overlap 1860154 TCACTAACACAAAAA CGACACCCTTCCC AACTA GGAAAGGGTGTCG TTTTTGCGTTAATTC LVIS_1901 1861231 - 1860221 - | transcription regulator of beta-galactosidase gene LVIS_1902 1862717 - 1861254 - | galactose-1-phosphate uridylyltransferase LVIS_1903 1863725 - 1862721 - | UDP-glucose 4-epimerase LVIS_1904 1864971 - 1863808 - | galactokinase TERM 2338 1865121 - 1865085 - R 82 -10.2 -3.72324 | overlap 1865088 TAGCGTCATTAACAA CAATAGGGCCAAGGCG TTTTC CACCCTAGCCCCATTA AATTTGTTTCTAATT TERM 2339 1865118 - 1865088 - R 86 -9.7 -3.99374 | overlap 1865085 CGTCATTAACAACAA TAGGGCCAAGGCG TTTTC CACCCTAGCCCCA TTAAATTTGTTTCTA LVIS_1905 1866555 - 1865131 - | Na+/xyloside symporter related transporter LVIS_1906 1866833 - 1866588 - | hypothetical protein TERM 2340 1867105 - 1867073 - R 100 -19.3 -4.6526 | opp_overlap 1867073 ATAAATTTGTAAAAA GGGAACGGCCATAAA AAA TCTACGGCCGTTCCC TTTTTATATTTATCG TERM 2341 1867073 - 1867105 + r 100 -14.9 -5.24799 | opp_overlap 1867073 ATAAATTTGTAAAAA GGGAACGGCCATAAA AAA TCTACGGCCGTTCCC TTTTTATATTTATCG LVIS_1907 1868852 - 1867122 - | phosphomannomutase LVIS_1908 1869896 - 1868874 - | aldose 1-epimerase TERM 2342 1869104 - 1869124 + g 78 -11.9 -2.94466 | overlap 1869096 1869099 GGTGTCCCGTGGTAT CCCCGATTG TCG CAATTGGGG TGTCCTTGCTAGGTT LVIS_1909 1870229 - 1871347 + | Acyl-CoA dehydrogenase LVIS_1910 1871357 - 1872151 + | electron transfer flavoprotein subunit beta TERM 2343 1873079 - 1873097 + G 85 -11 -3.86822 | CGCCGACTACGGCTA TGTTGGCG ACG CGCCAGCA TTTATGACAGCCTTG LVIS_1911 1872165 - 1873130 + | electron transfer flavoprotein subunit alpha TERM 2344 1873167 - 1873199 + T 100 -7.7 -5.25699 | opp_overlap 1873167 1873170, overlap 1873170 AATCTCGACAGTAAA GAACGGATAGACAGT TAA GTTGTCTACCCGCTC TTTTTATTCTGTCAT TERM 2345 1873199 - 1873167 - T 88 -10.7 -3.8377 | opp_overlap 1873167 1873170, overlap 1873170 AATCTCGACAGTAAA GAACGGATAGACA GTTAAGT TGTCTACCCGCTC TTTTTATTCTGTCAT TERM 2346 1873196 - 1873170 - T 80 -8.8 -4.04806 | opp_overlap 1873170 1873167, overlap 1873167 CTCGACAGTAAAGAA CGGATAGACA GTTAAGT TGTCTACCCG CTCTTTTTATTCTGT LVIS_1912 1874216 - 1873203 - | NADPH:quinone reductase related Zn-dependent oxidoreductase LVIS_1913 1874377 - 1874715 + | transcriptional regulator LVIS_1914 1874712 - 1875389 + | putative intracellular protease/amidase TERM 2347 1875434 - 1875404 - T 91 -7.6 -4.80882 | opp_overlap 1875404 1875431 ATCTCATAGCAAAAA CCACGATACACCAA TTT CTAATGTGTCGTGG TTTTTCACTTGTCTT TERM 2348 1875404 - 1875434 + T 74 -4.8 -4.8066 | opp_overlap 1875404, overlap 1875431 ATCTCATAGCAAAAA CCACGATACA CCAATTTCTAA TGTGTCGTGG TTTTTCACTTGTCTT LVIS_1915 1877166 - 1875448 - | phosphoenolpyruvate carboxykinase LVIS_1916 1877380 - 1877823 + | hypothetical protein TERM 2349 1877882 - 1877840 - T 100 -19.5 -4.87665 | opp_overlap 1877845, overlap 1877845 TCTCAGTTAGAAAAA TAAAAGCTAGGTTCAACCA AAAAG TGGTTGAACCTAGCTTTTT TGACAACTTATGACT TERM 2350 1877845 - 1877877 + T 100 -19.4 -5.03145 | opp_overlap 1877840 1877845 GTTAGAAAAATAAAA GCTAGGTTCAACCA AAAAG TGGTTGAACCTAGC TTTTTTGACAACTTA TERM 2351 1877877 - 1877845 - T 100 -19.4 -5.35224 | opp_overlap 1877845, overlap 1877840 GTTAGAAAAATAAAA GCTAGGTTCAACCA AAAAG TGGTTGAACCTAGC TTTTTTGACAACTTA LVIS_1917 1879302 - 1877890 - | major facilitator superfamily permease LVIS_1918 1879482 - 1879655 + | hypothetical protein TERM 2352 1879664 - 1879690 + F 100 -10 -5.46698 | AGCTTAAATCGTCAA CGGGCCCAGGCA GCT TGCCGCGGTCCG TTTTTTACTTTTAAG LVIS_1919 1879784 - 1880581 + | methionine aminopeptidase TERM 2353 1880903 - 1880879 - gT 76 -10.7 -2.52834 | overlap 1880878 CATGCTACCACTAAG GTTCGCCAAGC CCA GCTTGACGATC GGATTACCTTACGCC LVIS_1921 1882969 - 1881263 - | transposase LVIS_1920 1880597 - 1881313 + | SAM-dependent methyltransferase TERM 2354 1881407 - 1881363 - GT 76 -10.1 -3.29144 | opp_overlap 1881365, overlap 1881364 1881368 CTAGTCTCTTTATAA TGGAATAGGACGAGAAACCGA TCT TTGTTTTCTCGTCCTATTCTT TTGCTCTTGGAGTTG TERM 2355 1881406 - 1881364 - GT 93 -13.6 -2.57344 | opp_overlap 1881365, overlap 1881363 1881368 TAGTCTCTTTATAAT GGAATAGGACGAGAAACCGA TCT TTGTTTTCTCGTCCTATTCT TTTGCTCTTGGAGTT TERM 2356 1881365 - 1881405 + gT 100 -19.3 -4.43012 | opp_overlap 1881364 1881363 1881368 AGTCTCTTTATAATG GAATAGGACGAGAAACCGA TCT TTGTTTTCTCGTCCTATTC TTTTGCTCTTGGAGT TERM 2357 1881402 - 1881368 - GT 95 -13 -3.23274 | opp_overlap 1881365, overlap 1881364 1881363 CTCTTTATAATGGAA TAGGACGAGAAACCGA TCT TTGTTTTCTCGTCCTA TTCTTTTGCTCTTGG TERM 2358 1882280 - 1882300 + gT 82 -3.1 -5.50723 | overlap 1882282 AACTAGTTTCCGTTT CTTTGCTCG GAA CGTGCGACG TTTTTGTTTTGCTGG TERM 2359 1882319 - 1882344 + gT 73 -9.8 -3.00651 | gap 1, overlap 1882318 TTGTTTTGCTGGATT TGGCG-AGACC TTTTC GGTCTCCGCCA CTTTCTGCTCTAAAA TERM 2360 1882711 - 1882726 + gT 100 -10.4 -4.64861 | GAACTTGGTTGCTGA CCAGCC ATCC GGCTGG TTTATTTTCACGCGC TERM 2361 1883000 - 1883021 + Tr 100 -8 -5.8901 | CGGGGATAATCTGTG GGTATCGG GTGTGA CCGATGCC TTTTTTATTTTCTAT TERM 2362 1883086 - 1883047 - TR 100 -18 -4.371 | opp_overlap 1883048, overlap 1883048 TCTATTATATCAAAA GGCTGTCCAGTGAGAATC CGAA GATTCTCACTGGACCGCT TTATTTGTGGAGACT TERM 2363 1883085 - 1883048 - TR 100 -21.5 -3.21778 | opp_overlap 1883048, overlap 1883047 CTATTATATCAAAAG GCTGTCCAGTGAGAATC CGAA GATTCTCACTGGACCGC TTTATTTGTGGAGAC TERM 2364 1883048 - 1883085 + Tr 100 -21.5 -4.55295 | opp_overlap 1883047 1883048 CTATTATATCAAAAG GCTGTCCAGTGAGAATC CGAA GATTCTCACTGGACCGC TTTATTTGTGGAGAC TERM 2365 1883374 - 1883427 + Tr 100 -12.5 -3.53012 | gap 1, opp_overlap 1883420 1883423 CGACAAATGGGCTCA GTACCGTCGTTATCCTTGGCGCGC GTTTTTA GCGCGCCTAGGATAA-GACCGAGC TTTAAGACAAGCGAG LVIS_1922 1884429 - 1883575 - | XRE family transcriptional regulator TERM 2366 1883854 - 1883872 + g 73 -5.2 -4.60487 | overlap 1883855 GATAATGTTCAGCGT TCGCCAGA TAT TGTGGCGG TTTTTAAAAGTGGTC LVIS_1923 1885115 - 1884483 - | 3-methyladenine DNA glycosylase TERM 2367 1884559 - 1884549 - G 83 -8.2 -4.59944 | ACTACCAGAAACAAA CGGG TTC CCCG CAACAGTATAACGGA LVIS_1925 1886200 - 1885508 - | HAD family sugar phosphatase LVIS_1924 1885177 - 1885569 + | hypothetical protein TERM 2368 1886287 - 1886324 + Tr 100 -10.6 -4.26076 | opp_overlap 1886289, overlap 1886288 GTTGGTCGCATCAAA AAGGCTCCGTGAAATC CATTTA GATTTCGCGGAGCCAC TTTTGGTAACCCTAA TERM 2369 1886288 - 1886323 + Tr 100 -14.1 -3.15324 | opp_overlap 1886289, overlap 1886287 TTGGTCGCATCAAAA AGGCTCCGTGAAATC CATTTA GATTTCGCGGAGCCA CTTTTGGTAACCCTA TERM 2370 1886322 - 1886289 - TR 100 -16.1 -4.72272 | opp_overlap 1886288 1886287 TGGTCGCATCAAAAA GGCTCCGTGAAATCC ATTT AGATTTCGCGGAGCC ACTTTTGGTAACCCT TERM 2371 1886351 - 1886366 + Tr 71 -4.6 -4.72272 | opp_overlap 1886351 1886350 1886353, overlap 1886353 CTAACGAATGACAAT GACCGA AACG TCGGCC TTTTTAGTCAACCGC LVIS_1926 1886794 - 1886336 - | UspA family nucleotide-binding protein TERM 2372 1886883 - 1886867 - R 100 -13.7 -4.53705 | opp_overlap 1886867 AATTGGGACACAAAA GGCCGGT TAA ACCGGCC TTTTTTTTACCGCGA TERM 2373 1886867 - 1886883 + r 100 -13.7 -5.75342 | opp_overlap 1886867 AATTGGGACACAAAA GGCCGGT TAA ACCGGCC TTTTTTTTACCGCGA LVIS_1927 1888486 - 1886906 - | choline-glycine betaine transporter LVIS_1928 1889496 - 1888888 - | galactoside O-acetyltransferase TERM 2374 1889395 - 1889405 + g 73 -5.4 -4.56597 | TGCCAGTTGATTAGC CGTT TGC AACG TTTTTCGGGCCAAGA TERM 2375 1889570 - 1889552 - R 100 -6.7 -5.60993 | TTGTGGACAAAAAAA TGACGGA ACAAG CCCGTCA CAACATCCCTAATTA LVIS_1929 1890058 - 1889579 - | hypothetical protein LVIS_1930 1890967 - 1890173 - | RNase H LVIS_1931 1891241 - 1891720 + | hypothetical protein TERM 2376 1891757 - 1891724 - T 100 -14.1 -4.77216 | opp_overlap 1891727, overlap 1891727 AAGAAGAGTTAAAAA TAATGAGTCAGAGAT TATA ATCTCTGACTCATTT TTATGATTAATTCAA TERM 2377 1891727 - 1891754 + T 100 -15.8 -5.00765 | opp_overlap 1891724 1891727 AAGAGTTAAAAATAA TGAGTCAGAGAT TATA ATCTCTGACTCA TTTTTATGATTAATT TERM 2378 1891754 - 1891727 - T 100 -15.8 -4.47118 | opp_overlap 1891727, overlap 1891724 AAGAGTTAAAAATAA TGAGTCAGAGAT TATA ATCTCTGACTCA TTTTTATGATTAATT LVIS_1932 1893002 - 1891764 - | dihydroorotase TERM 2379 1892561 - 1892546 - G 71 -4.7 -4.61566 | GTGGAAATGATAAAA TTCCC TCTTGT GGGAA AGCCACTAACTGAAG LVIS_1933 1893328 - 1893032 - | hypothetical protein LVIS_1934 1893537 - 1894352 + | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase TERM 2380 1894387 - 1894423 + T 90 -13.1 -2.50791 | opp_overlap 1894392, overlap 1894392 1894421 CATTAAATTATCTGC TAAAAGTGGCGACCG AAGATAA CGGCCGCCACTTTTG ATACTTTTATCAATA TERM 2381 1894418 - 1894392 - T 100 -13 -4.10429 | opp_overlap 1894387 1894392 AATTATCTGCTAAAA GTGGCGACCG AAGATAA CGGCCGCCAC TTTTGATACTTTTAT TERM 2382 1894392 - 1894418 + T 100 -10.8 -4.43571 | opp_overlap 1894392, overlap 1894387 AATTATCTGCTAAAA GTGGCGACCG AAGATAA CGGCCGCCAC TTTTGATACTTTTAT LVIS_1935 1894631 - 1894452 - | hypothetical protein LVIS_1936 1895316 - 1894624 - | putative NADPH-quinone reductase (modulator of drug activity B) TERM 2383 1895445 - 1895422 - H 100 -13.2 -5.52096 | AAATTCAACAAAAAA GGCGTCAGCA TCAC TGCTAACGCC CCCCTTATGTCGCAA TERM 2384 1895861 - 1895843 - g 100 -8.2 -5.41143 | overlap 1895844 TATCGGGTAAAAAAA CGGTTAGT CCA ACTAACCA AGTCTCCAATCAAGT TERM 2385 1895860 - 1895844 - g 79 -9.5 -3.83963 | overlap 1895843 ATCGGGTAAAAAAAC GGTTAGT CCA ACTAACC AAGTCTCCAATCAAG LVIS_1938 1895662 - 1895979 + | hypothetical protein LVIS_1939 1896088 - 1896237 + | hypothetical protein TERM 2386 1896249 - 1896268 + T 100 -10 -5.45802 | TTAACTTTTGGTGAA CGCTTAGC CACG GCTAGGCG TTTTTCTTTTGCGGC LVIS_1940 1897234 - 1896290 - | IS30 family transposase TERM 2387 1897322 - 1897332 + r 82 -4.6 -5.25976 | GTTAAACATATTCTA CCCG GTA TGGG TTTATTTTTTTACTT TERM 2388 1897410 - 1897385 - R 85 -7.5 -4.82901 | overlap 1897387 TTCGCCGCACAAAAA TAGGCCAGGGC ATCT ACCCTGACCTC CGATAATCCAATTAC TERM 2389 1897408 - 1897387 - R 86 -10.1 -4.03995 | overlap 1897385 CGCCGCACAAAAATA GGCCAGGGC ATCT ACCCTGACC TCCGATAATCCAATT LVIS_1941 1897661 - 1897422 - | heme/steroid binding protein TERM 2390 1897835 - 1897853 + r 70 -7.4 -3.7511 | opp_overlap 1897851, overlap 1897828 GTATTGCCGGTTGAC CCATCCCT TTA AGTGATGG TTATCTTCTGAAACA TERM 2391 1897991 - 1898012 + r 100 -8.7 -4.83615 | opp_overlap 1897991 ACGACATACAAAAAA CCCACCATC CGAA GATGATGGG TTTTTATAACGACTC TERM 2392 1898012 - 1897991 - R 100 -10.9 -5.43414 | opp_overlap 1897991 ACGACATACAAAAAA CCCACCATC CGAA GATGATGGG TTTTTATAACGACTC LVIS_1942 1898246 - 1898043 - | cold shock protein LVIS_1943 1899044 - 1898436 - | esterase LVIS_1944 1899377 - 1899057 - | hypothetical protein TERM 2393 1899379 - 1899368 - G 74 -4.4 -4.87807 | TTAACACATCAAAAA TCGT TTGC ACGA TAATCCCCCCTCGAA LVIS_1945 1900578 - 1899439 - | A/G-specific DNA glycosylase LVIS_1946 1900776 - 1902368 + | ABC-type oligopeptide transport system, periplasmic component TERM 2394 1902408 - 1902377 - T 100 -17.4 -4.36931 | opp_overlap 1902377 GAAGTGACACCAAAA GAAGGCCACTCATC AACT GGTGAGTGGCCTTC TTTTTAACGCTTAAT TERM 2395 1902377 - 1902408 + T 100 -19.6 -4.62872 | opp_overlap 1902377 GAAGTGACACCAAAA GAAGGCCACTCATC AACT GGTGAGTGGCCTTC TTTTTAACGCTTAAT LVIS_1947 1905754 - 1902419 - | hypothetical protein TERM 2396 1902607 - 1902625 + g 71 -8.9 -3.54129 | TGACTGACTTAGTCG CAGACAG CTTAA CTGTCTG TTTGCCAGCAGTCTG TERM 2397 1902645 - 1902655 + g 71 -8.2 -3.71148 | opp_overlap 1902645 CCAGCAGTCTGAACA GCGG CAC CCGC TTTAACTACCTTTTG TERM 2398 1903817 - 1903799 - G 75 -11.8 -2.52516 | opp_overlap 1903791, overlap 1903798 TTTGGCAGGATCAAT TGTCAACG TCC CGTTGACA TATGAAACTTTATAA TERM 2399 1905947 - 1905937 - R 78 -4 -5.17507 | AAAATTGAATAAAAA TGTT CCC AACA AACATTCATCAATTA LVIS_1948 1906204 - 1906046 - | hypothetical protein TERM 2400 1906087 - 1906122 + g 100 -14.8 -4.4767 | opp_overlap 1906087 TACCTAAAGCAAAAA GGACCGTGTACCCAGT CGCA ACTGCGTACACGATCC TTTTATAATCAATAC TERM 2401 1906122 - 1906087 - G 100 -17 -5.00138 | opp_overlap 1906087 TACCTAAAGCAAAAA GGACCGTGTACCCAGT CGCA ACTGCGTACACGATCC TTTTATAATCAATAC LVIS_1949 1906550 - 1906239 - | hypothetical protein LVIS_1950 1907583 - 1906540 - | lipoate-protein ligase A LVIS_1951 1907729 - 1908103 + | glycine cleavage system H protein (lipoate-binding) TERM 2402 1908148 - 1908185 + T 100 -15.8 -4.35518 | opp_overlap 1908148 ATCATTTACACCAAA TAGACCTTTCAATCGC CGTTAA GCGCTTGAAAGGTCTA TTTTCATGTAGGATT TERM 2403 1908185 - 1908148 - T 100 -16.5 -3.85092 | opp_overlap 1908148 ATCATTTACACCAAA TAGACCTTTCAATCGCC GTTA AGCGCTTGAAAGGTCTA TTTTCATGTAGGATT LVIS_1952 1909189 - 1908206 - | oxidoreductase TERM 2404 1909072 - 1909044 - G 81 -5.9 -4.91109 | overlap 1909048 GCGGTATCATAAAAA TTAACGCCGGCAT CGT AAGCCGCCGCCAA CGTATTCTGCGCATC TERM 2405 1909110 - 1909100 - G 71 -8.2 -3.72695 | overlap 1909101 ATCGGTGGCATCAAA GGGG TCG CCCC ACTTGGACCCCAATT LVIS_1953 1909394 - 1909609 + | hypothetical protein TERM 2406 1909656 - 1909633 - T 100 -11 -5.53288 | opp_overlap 1909633 TTTAACCTAAAAAAA TCTCCTTGCC AATG GGCAGGGAGA TTTTTTATTTCTAAG TERM 2407 1909633 - 1909656 + T 100 -13.2 -5.72622 | opp_overlap 1909633 TTTAACCTAAAAAAA TCTCCTTGCC AATG GGCAGGGAGA TTTTTTATTTCTAAG LVIS_1954 1910653 - 1909667 - | DMT family permease TERM 2408 1911144 - 1911173 + r 74 -6.4 -4.564 | opp_overlap 1911145, overlap 1911145 AAAACCCTAAAAGAA ACGGTGTTCCCT AAATTC AAGGAACACCGC TTTTCATTTAACATT TERM 2409 1911172 - 1911145 - R 100 -12.8 -4.69559 | opp_overlap 1911144 1911145 AAACCCTAAAAGAAA CGGTGTTCCCTA AATT CAAGGAACACCG CTTTTCATTTAACAT TERM 2410 1911145 - 1911172 + r 76 -9.9 -3.32756 | opp_overlap 1911145, overlap 1911144 AAACCCTAAAAGAAA CGGTGTTCCCT AAATTC AAGGAACACCG CTTTTCATTTAACAT LVIS_1955 1911867 - 1911187 - | ABC-type metal ion transport system, permease component LVIS_1956 1912932 - 1911868 - | ABC-type metal ion transport system, ATPase component LVIS_1957 1913800 - 1912997 - | ABC-type metal ion transport system, periplasmic component/surface antigen TERM 2411 1913904 - 1913865 - R 75 -7.3 -4.31412 | overlap 1913871 AAACAGTGACCAAAA GAAAAAGTCCGCTCCTA AATTAA TAGAAACGAACTTTGTC GTGGTACCATTCTAA TERM 2412 1913898 - 1913871 - R 87 -4.9 -5.50723 | overlap 1913865 TGACCAAAAGAAAAA GTCCGCTCCTA AATTAA TAGAAACGAAC TTTGTCGTGGTACCA LVIS_1958 1914856 - 1914308 - | 3-methyladenine DNA glycosylase TERM 2413 1914780 - 1914758 - G 71 -8.5 -3.62096 | overlap 1914761 TGTCAGTAGTTCAAA CAACACATG GTCAT CATGTGTCG GTGTCCCAAAATAGG LVIS_1959 1916584 - 1914944 - | ABC-type oligopeptide transport system, periplasmic component TERM 2414 1916697 - 1916657 - R 100 -20.7 -4.98616 | TTAAAACACGAAAAA GCGGGTTATCCCTTCAC TCGCATC GTGAAAGGATAACCCGC TACACTGACAACCTG LVIS_1960 1916835 - 1916731 - | hypothetical protein TERM 2415 1919268 - 1919289 + G 75 -10.1 -3.35088 | overlap 1919256 ATTGCGAGCTGTCGT CGCTTTGGG TGGT CCCCAAGCG TTGATTACAGACTTT LVIS_1961 1917082 - 1919337 + | Beta-glucosidase-related glycosidase TERM 2416 1919348 - 1919375 + T 100 -14.2 -4.788 | opp_overlap 1919348 AATAATCTCAAAAAA GCGTTACCCGGA AATT TCCGTGTAACGC TTTTTAGGTTAATTT TERM 2417 1919375 - 1919348 - T 100 -14.2 -5.11937 | opp_overlap 1919348 AATAATCTCAAAAAA GCGTTACCCGGA AATT TCCGTGTAACGC TTTTTAGGTTAATTT LVIS_1962 1920367 - 1919384 - | conjugated bile salt hydrolase-like protein TERM 2418 1920739 - 1920727 - R 75 -3.4 -5.09259 | opp_overlap 1920727 CATCCTAAAACAAAA CTGT TATCG ACAG TTAATTTACAGCGAT TERM 2419 1920837 - 1920812 - R 100 -13.3 -4.07885 | opp_overlap 1920812 CACTCCTTTTTAAAA GCGTTCACGGC TTTC GCCCTGAACGC TTTTTTCGGTCCCAA TERM 2420 1920812 - 1920837 + r 100 -13.3 -5.08824 | opp_overlap 1920812 CACTCCTTTTTAAAA GCGTTCACGGC TTTC GCCCTGAACGC TTTTTTCGGTCCCAA LVIS_1963 1924011 - 1920862 - | DNA repair ATPase TERM 2421 1922376 - 1922396 + g 88 -13.3 -3.15212 | opp_overlap 1922372 GTTTGACATCATCCT CGGTGGCTG TCT CAGTCACCG TTGCCTGTGCTGGTT TERM 2422 1923840 - 1923809 - G 87 -10.8 -4.25104 | overlap 1923810 GCGGCGGTAGCAAAA TCCGATCGCATAGC CGGA GCCTTGCGATCGGT ACCTGAAGTCTGGTC TERM 2423 1923839 - 1923810 - G 90 -14.3 -3.14848 | overlap 1923809 CGGCGGTAGCAAAAT CCGATCGCATAGC CGGA GCCTTGCGATCGG TACCTGAAGTCTGGT LVIS_1964 1925141 - 1924008 - | DNA repair exonuclease TERM 2424 1924789 - 1924776 - G 70 -2.3 -4.88228 | overlap 1924763 AGGCAATAGGAAAAA TTGCG TATC CGCCA AAGTCACTGGTTTCA LVIS_1965 1925713 - 1925153 - | 3-methyladenine DNA glycosylase TERM 2425 1925980 - 1925961 - g 73 -7.2 -4.22652 | gap 1 CTACACCATTTAAAA GC-GCAATC ACT GATTGCTGC TGCAACGGTTACCTT TERM 2426 1926839 - 1926821 - g 71 -3 -4.89339 | overlap 1926822 1926823 AACGACCGATAAAAA TCGCGCTA AGC TAGCGCTT AAGATTTATGTCGCT LVIS_1966 1925937 - 1926863 + | hypothetical protein TERM 2427 1926904 - 1926879 - f 77 -10.5 -3.16055 | opp_overlap 1926879 CAAATCCGTTATGAA TTGGCATCTGC TTGC GTAGATGCCAA TTTTTTATTTGCAAT TERM 2428 1926879 - 1926904 + F 100 -12.7 -5.64421 | opp_overlap 1926879 CAAATCCGTTATGAA TTGGCATCTGC TTGC GTAGATGCCAA TTTTTTATTTGCAAT LVIS_1967 1927007 - 1927957 + | Lyzozyme M1 (1,4-beta-N-acetylmuramidase) TERM 2429 1928006 - 1927974 - T 100 -14.2 -4.67353 | opp_overlap 1927975, overlap 1927975 CCATTGATTTAAAAA GGCAACGCCACAGA GACTA TCTGTGGCGCTGCT TTTTTCGTCTCACTA TERM 2430 1928005 - 1927975 - T 100 -17.7 -3.3993 | opp_overlap 1927975, overlap 1927974 CATTGATTTAAAAAG GCAACGCCACAGA GACTA TCTGTGGCGCTGC TTTTTTCGTCTCACT TERM 2431 1927975 - 1928005 + T 100 -15.5 -5.22312 | opp_overlap 1927975 1927974 CATTGATTTAAAAAG GCAACGCCACAGA GACTA TCTGTGGCGCTGC TTTTTTCGTCTCACT LVIS_1968 1929143 - 1928019 - | endoglucanase Y TERM 2432 1929268 - 1929250 - R 100 -12.4 -5.31877 | ATTGACGACAAAAAA GGCCGCGA TTT TCGCAGCC TGCTCACAATCTAAT LVIS_1969 1929599 - 1929279 - | gamma-carboxymuconolactone decarboxylase subunit-like protein LVIS_1970 1930021 - 1929599 - | double-stranded beta-helix-like protein LVIS_1971 1930455 - 1930027 - | transcriptional regulator TERM 2433 1930519 - 1930496 - R 78 -9.6 -3.73402 | overlap 1930498 ACATGTTTTAGTAAA CACCTTCGAG TGTA CTCGAAGGCA AGAATAAACTGAACT TERM 2434 1930517 - 1930498 - R 91 -12.2 -3.45027 | overlap 1930496 ATGTTTTAGTAAACA CCTTCGAG TGTA CTCGAAGG CAAGAATAAACTGAA TERM 2435 1930600 - 1930550 - R 100 -15 -2.61728 | opp_overlap 1930551 1930556, overlap 1930556 ATTTTGAATATTAAT CTAAAAGTGGTACTTCTAACGG CTAAACC CCGCTGGAAGTACCACTTTTAT TCTCACCGATTGAGA TERM 2436 1930551 - 1930599 + r 100 -18.5 -3.31322 | opp_overlap 1930550 1930556, overlap 1930556 TTTTGAATATTAATC TAAAAGTGGTACTTCTAACGG CTAAACC CCGCTGGAAGTACCACTTTTA TTCTCACCGATTGAG TERM 2437 1930594 - 1930556 - R 100 -14 -4.31688 | opp_overlap 1930551 1930556, overlap 1930550 AATATTAATCTAAAA GTGGTACTTCTAACGG CTAAACC CCGCTGGAAGTACCAC TTTTATTCTCACCGA TERM 2438 1930556 - 1930594 + r 100 -14 -4.77165 | opp_overlap 1930556 1930550, overlap 1930551 AATATTAATCTAAAA GTGGTACTTCTAACGG CTAAACC CCGCTGGAAGTACCAC TTTTATTCTCACCGA LVIS_1972 1931201 - 1930632 - | transcriptional regulator LVIS_1973 1932036 - 1931635 - | transcriptional regulator TERM 2439 1932210 - 1932176 - R 76 -9.5 -3.55548 | gap 1, opp_overlap 1932176 1932175 GAACATTGCTTGAAA CTGATACGCGTTCC GTATGTCA GGAACG-GTATCAG CTTATTAGCCTTTCG TERM 2440 1932176 - 1932210 + r 70 -9.5 -2.8207 | gap 1, opp_overlap 1932176, overlap 1932175 GAACATTGCTTGAAA CTGATACGCGTTCC GTATGTCA GGAACG-GTATCAG CTTATTAGCCTTTCG TERM 2441 1932307 - 1932271 - R 90 -7.3 -5.15167 | opp_overlap 1932271 CACTATGAATAAAAA GCTGTTGAAAGGACTAT TTA AGACCCCTTTCAGCAGC TTTTTAACAATAACA TERM 2442 1932271 - 1932307 + r 81 -7.3 -4.59773 | opp_overlap 1932271 CACTATGAATAAAAA GCTGTTGAAAGGACTAT TTA AGACCCCTTTCAGCAGC TTTTTAACAATAACA LVIS_1974 1933641 - 1932400 - | hypothetical protein TERM 2443 1933921 - 1933961 + r 100 -9.9 -5.04222 | opp_overlap 1933925, overlap 1933924 1933925 GCTACGCTGCGCACA AAAAGGCGCAATAAAATCA TAA TAATTTTATTGCGCCATTG TTTTTCATTTAATTA TERM 2444 1933924 - 1933958 + r 100 -11.6 -4.58698 | opp_overlap 1933925, overlap 1933921 1933925 ACGCTGCGCACAAAA AGGCGCAATAAAATCA TAA TAATTTTATTGCGCCA TTGTTTTTCATTTAA TERM 2445 1933957 - 1933925 - R 100 -17.3 -4.82901 | opp_overlap 1933924 1933921 1933925 CGCTGCGCACAAAAA GGCGCAATAAAATCA TAA TAATTTTATTGCGCC ATTGTTTTTCATTTA TERM 2446 1933925 - 1933957 + r 100 -15.1 -3.33592 | opp_overlap 1933925, overlap 1933924 1933921 CGCTGCGCACAAAAA GGCGCAATAAAATCA TAA TAATTTTATTGCGCC ATTGTTTTTCATTTA LVIS_1975 1934844 - 1934002 - | aldo/keto reductase TERM 2447 1934124 - 1934114 - G 71 -6.8 -4.13882 | GAGAAATCAAAAACA GCCA AAT TGGC CCGTTGATGAGCTAG TERM 2448 1934370 - 1934384 + g 93 -12.8 -3.95584 | opp_overlap 1934367 1934368 CAATTTGATTAACCG CCGGCG TCA CGCCGG TTTCATTAATCAGCC LVIS_1976 1936088 - 1934904 - | arabinose efflux permease LVIS_1977 1937307 - 1936114 - | arabinose efflux permease LVIS_1978 1938248 - 1937493 - | NADH:flavin oxidoreductase TERM 2449 1937666 - 1937654 - G 71 -6.9 -4.18197 | ATCGCTTAGCTAAAA CAGCC GTT GGCCG CGGACTCTTTAACGT LVIS_1979 1938752 - 1938486 - | ethanolamine utilisation protein EutN TERM 2450 1940011 - 1939975 - R 100 -18.3 -5.10208 | opp_overlap 1939975 CAACCTTAATAAAAA GCGGTATTCTCAGAA TGTTAGC TTCTGAGAATACCGC TTTTACTTACATACA TERM 2451 1939975 - 1940011 + r 100 -18.3 -4.43477 | opp_overlap 1939975 CAACCTTAATAAAAA GCGGTATTCTCAGAA TGTTAGC TTCTGAGAATACCGC TTTTACTTACATACA LVIS_1981 1940741 - 1940034 - | hypothetical protein LVIS_1982 1941816 - 1940767 - | hypothetical protein LVIS_1983 1942469 - 1941831 - | hypothetical protein TERM 2452 1942345 - 1942359 + g 73 -7.8 -4.11216 | AAAACCAATAATCGT GTGCCA AGT TGGCGC TTTTCAAAATGCCAA LVIS_1984 1944181 - 1942529 - | cobalt ABC transporter ATPase TERM 2453 1944014 - 1944031 + g 74 -9.9 -3.54638 | overlap 1944029 CTCACCGGCCGGCCA CAGCTCA TGTT TGAGCTG TTTAAGCAGGGTTGT LVIS_1985 1945062 - 1944169 - | ABC-type cobalt transport system, permease component CbiQ related transporter TERM 2454 1945362 - 1945330 - R 100 -9.2 -5.2189 | TCAACTACCAAAAAA CGCGTATCAATAGG ATAGA CCAACTGATACACG CTTAAATAATATTAT LVIS_1986 1945885 - 1945475 - | hypothetical protein LVIS_1987 1946451 - 1945888 - | 3-polyprenyl-4-hydroxybenzoate decarboxylase LVIS_1988 1947932 - 1946466 - | 3-polyprenyl-4-hydroxybenzoate decarboxylase related decarboxylase LVIS_1989 1948050 - 1948931 + | transcriptional regulator LVIS_1990 1949023 - 1949433 + | peptide deformylase TERM 2455 1949447 - 1949472 + F 100 -10.5 -4.65895 | opp_overlap 1949447 AGGCCCCGTCAAAAA GCGTGCTAC ATCTGAGC GTAGCACGC TTTTTGACTACAAAC TERM 2456 1949472 - 1949447 - f 100 -11.2 -4.56775 | opp_overlap 1949447 AGGCCCCGTCAAAAA GCGTGCTACA TCTGAG CGTAGCACGC TTTTTGACTACAAAC TERM 2457 1949828 - 1949843 + G 73 -4.6 -4.75219 | overlap 1949830 AGTTAGCACCTCACG CAGCCG CTTA CGGCTA TTTTGTTGATCATTA TERM 2458 1949830 - 1949841 + G 71 -7.2 -3.98016 | overlap 1949828 TTAGCACCTCACGCA GCCG CTTA CGGC TATTTTGTTGATCAT LVIS_1991 1949704 - 1951428 + | membrane-associated phospholipid phosphatase TERM 2459 1951489 - 1951455 - f 100 -10 -4.59109 | opp_overlap 1951455 GATATTGCTTAAAAA TAACGCCCCCGGCAAT TTT AGTGCCGACAGCGTTA TTTTTAATTACGCGC TERM 2460 1951455 - 1951489 + F 78 -5.6 -4.8622 | opp_overlap 1951455 GATATTGCTTAAAAA TAACGCCCCCGGCAAT TTT AGTGCCGACAGCGTTA TTTTTAATTACGCGC LVIS_1992 1951569 - 1951913 + | hypothetical protein TERM 2461 1952010 - 1952046 + T 100 -14.6 -3.72527 | opp_overlap 1952010, overlap 1952002 AGCTACCTACTAAAA TTGGCCCTGTAAAACC CAAAA GGTTTTGCAGAGCCAA TTATTAGGTCATTTT TERM 2462 1952046 - 1952010 - T 100 -15.3 -4.28548 | opp_overlap 1952010 1952002 AGCTACCTACTAAAA TTGGCCCTGTAAAACCC AAA AGGTTTTGCAGAGCCAA TTATTAGGTCATTTT LVIS_1993 1952715 - 1952065 - | glycerol uptake facilitator related permease LVIS_1994 1953560 - 1952946 - | pyrrolidone-carboxylate peptidase TERM 2463 1953454 - 1953432 - G 79 -9.9 -3.86944 | opp_overlap 1953427, overlap 1953427 1953434 CGCACAAGTACCAAA CACCGTTGG GATTT CCAACGGTA CCACCGTCGCTCCAG TERM 2464 1953452 - 1953434 - G 77 -10.3 -3.51793 | opp_overlap 1953427, overlap 1953427 1953432 CACAAGTACCAAACA CCGTTGG GATTT CCAACGG TACCACCGTCGCTCC TERM 2465 1953627 - 1953647 + r 100 -11.1 -5.57729 | opp_overlap 1953627 TCCCCAACTCAAAAA GTCCTCCGC ATT GCGAAGGAC TTTTTTCTATTCTTT TERM 2466 1953647 - 1953627 - R 100 -13.3 -4.74103 | opp_overlap 1953627 TCCCCAACTCAAAAA GTCCTCCGC ATT GCGAAGGAC TTTTTTCTATTCTTT LVIS_1995 1955423 - 1953654 - | ABC-type multidrug transport system, ATPase and permease component LVIS_1996 1955984 - 1955451 - | transcriptional regulator TERM 2467 1956019 - 1956071 + H 85 -9.6 -4.08767 | gap 1, opp_overlap 1956021 1956029 1956052 1956064, overlap 1956020 1956021 1956064 ACTTAATGGTCACTA TA-TTAGCATATTAGTTAGCTTTTG CAAG TAAAAGCTAACTAAAAAGCTAACTA TTTTCAAAAAATAAC TERM 2468 1956020 - 1956069 + H 82 -10.3 -3.6422 | opp_overlap 1956021 1956029 1956052 1956064, overlap 1956019 1956021 1956064 CTTAATGGTCACTAT ATTAGCATATTAGTTAGCTTTTG CAAG TAAAAGCTAACTAAAAAGCTAAC TATTTTCAAAAAATA TERM 2469 1956021 - 1956068 + H 95 -13.8 -2.78211 | opp_overlap 1956021 1956029 1956052 1956064, overlap 1956020 1956019 1956064 TTAATGGTCACTATA TTAGCATATTAGTTAGCTTTTG CAAG TAAAAGCTAACTAAAAAGCTAA CTATTTTCAAAAAAT TERM 2470 1956068 - 1956021 - H 91 -13.1 -2.79831 | opp_overlap 1956021 1956020 1956019 1956064, overlap 1956029 1956052 1956064 TTAATGGTCACTATA TTAGCATATTAGTTAGCTTTT GCAAGT AAAAGCTAACTAAAAAGCTAA CTATTTTCAAAAAAT TERM 2471 1956060 - 1956029 - H 83 -11.9 -2.8511 | opp_overlap 1956021 1956020 1956019, overlap 1956021 1956052 CACTATATTAGCATA TTAGTTAGCTTTT GCAAGT AAAAGCTAACTAA AAAGCTAACTATTTT TERM 2472 1956090 - 1956064 - H 100 -8.2 -4.90917 | opp_overlap 1956021 1956020 1956019 1956064, overlap 1956021 1956052 AAAGCTAACTAAAAA GCTAACTATTTT CAA AAAATAACTAGC TTTTCCCCCATTGAC TERM 2473 1956234 - 1956258 + H 100 -11.5 -5.80003 | opp_overlap 1956232 TATGGATCAACTAGT GCCCTCATC TCGGATT GATGAGGGC TTTTTTATTTGTTCA LVIS_1997 1956292 - 1957005 + | permease TERM 2474 1957019 - 1957070 + T 100 -24.8 -3.17956 | opp_overlap 1957026, overlap 1957022 1957026 AATCCCGTTTGAGAT GAATAAATAGGTCTGCCTAACCAG TTAA CTGGTTAGGCAGGCCTATTTGTGC TTAATGCGGTGCTTT TERM 2475 1957022 - 1957067 + T 100 -25.1 -2.78547 | opp_overlap 1957026, overlap 1957019 1957026 CCCGTTTGAGATGAA TAAATAGGTCTGCCTAACCAG TTAA CTGGTTAGGCAGGCCTATTTG TGCTTAATGCGGTGC TERM 2476 1957026 - 1957063 + T 100 -23.7 -4.08144 | opp_overlap 1957026, overlap 1957022 1957019 TTTGAGATGAATAAA TAGGTCTGCCTAACCAG TTAA CTGGTTAGGCAGGCCTA TTTGTGCTTAATGCG TERM 2477 1957063 - 1957026 - T 100 -21.5 -4.29106 | opp_overlap 1957026 1957022 1957019 TTTGAGATGAATAAA TAGGTCTGCCTAACCAG TTAA CTGGTTAGGCAGGCCTA TTTGTGCTTAATGCG LVIS_1998 1957853 - 1957071 - | protein tyrosine/serine phosphatase TERM 2478 1957975 - 1958002 + r 100 -9.2 -4.66163 | opp_overlap 1957976, overlap 1957976 GACGACCGACAAAAA ACTTGGTCATCA ACTT TGATGGCCAAGA TTTTTGACTGCAACT TERM 2479 1958001 - 1957976 - R 100 -10.5 -5.28778 | opp_overlap 1957975 1957976 ACGACCGACAAAAAA CTTGGTCATCA ACTT TGATGGCCAAG ATTTTTGACTGCAAC TERM 2480 1957976 - 1958001 + r 95 -12.7 -3.39216 | opp_overlap 1957976, overlap 1957975 ACGACCGACAAAAAA CTTGGTCATCA ACTT TGATGGCCAAG ATTTTTGACTGCAAC LVIS_1999 1958774 - 1958019 - | ABC transporter permease LVIS_2000 1959477 - 1958767 - | ABC transporter ATPase LVIS_2001 1959844 - 1959470 - | transcriptional regulator LVIS_2002 1960056 - 1961018 + | Beta-lactamase class A TERM 2481 1961065 - 1961035 - T 100 -10.5 -4.78107 | opp_overlap 1961035 GACTATTACCAAAAA GGACCTATCACGT TCAAC ACGTGGTAGATCC TTTTTTAATACACCT TERM 2482 1961035 - 1961065 + T 100 -10.5 -5.14965 | opp_overlap 1961035 GACTATTACCAAAAA GGACCTATCACGT TCAAC ACGTGGTAGATCC TTTTTTAATACACCT LVIS_2003 1961557 - 1961084 - | glutathione peroxidase LVIS_2004 1962398 - 1961646 - | HAD superfamily hydrolase LVIS_2005 1963647 - 1962472 - | major facilitator superfamily permease TERM 2483 1963436 - 1963399 - G 71 -9.1 -3.54414 | gap 1, overlap 1963374 1963371 1963397 1963402 ATTGCCAACTAAATA GACGCCAA-TCCCAGCCA ACA TGGCTGGGCGTCGGCCCC AATAATCGGCCAACT TERM 2484 1963433 - 1963402 - G 75 -11.6 -2.60199 | gap 1, overlap 1963374 1963371 1963399 1963397 GCCAACTAAATAGAC GCCAA-TCCCAGCCA ACA TGGCTGGGCGTCGGC CCCAATAATCGGCCA TERM 2485 1963850 - 1963829 - R 100 -12.3 -5.02074 | opp_overlap 1963829 1963828 1963826 TCACCGCCCAAAAAA GCCAGAACG CAAC CGTCCTGGC ATCTTGGTATCTACT TERM 2486 1963829 - 1963850 + r 70 -10.1 -2.53613 | opp_overlap 1963829, overlap 1963828 1963826 TCACCGCCCAAAAAA GCCAGAACG CAAC CGTCCTGGC ATCTTGGTATCTACT LVIS_2006 1964671 - 1963865 - | HAD superfamily hydrolase TERM 2487 1964782 - 1964765 - R 88 -6.9 -5.17507 | AAAATCGAATAAAAA GCGCAGC CGCA GCTCCGC TCATCAACTCTATTT LVIS_2007 1965580 - 1964792 - | methionine aminopeptidase TERM 2488 1965672 - 1965644 - R 100 -9.6 -5.79595 | opp_overlap 1965644 GCCGAAAATAAAAAA GCACCGATCACC TCCCG GATGACCGATGC TTCACTCCCCCTATC TERM 2489 1965704 - 1965731 + r 79 -10.8 -3.21912 | opp_overlap 1965704 CAATGACCATATCAA TGCTGGTTAATT CCCC AATTAATCAGCA TTCATGAATTGGCCA LVIS_2008 1966417 - 1965722 - | hypothetical protein TERM 2490 1966956 - 1966936 - R 100 -10.4 -5.95946 | opp_overlap 1966954 TCAATAATAAAAAAA GGACGGCG CTAAT CGCCATCC CACCAGACTAAGCAT TERM 2491 1966980 - 1966964 - R 70 -9.5 -2.79796 | opp_overlap 1966954 CGCCATCCCACCAGA CTAAGCA TCC TGCTTAG TCGCTGCAATATCTA LVIS_2009 1967692 - 1966964 - | Short-chain alcohol dehydrogenase of unknown specificity LVIS_2010 1967827 - 1968189 + | transcriptional regulator TERM 2492 1968226 - 1968262 + T 100 -17.6 -4.49556 | gap 1, opp_overlap 1968226 GTAATCAAATAAAAA GGACGCTTTCAGAACTG ACAA CA-TTCTGAAAGCGTCC TTTATTTAGTAGAGC TERM 2493 1968262 - 1968226 - T 100 -17.6 -5.38326 | gap 1, opp_overlap 1968226 GTAATCAAATAAAAA GGACGCTTTCAGAACTG ACAA CA-TTCTGAAAGCGTCC TTTATTTAGTAGAGC LVIS_2011 1968713 - 1968303 - | hypothetical protein LVIS_2012 1969144 - 1968725 - | hypothetical protein TERM 2494 1969102 - 1969129 + g 77 -4.2 -5.01497 | TGATCACATCATCTT CAAACGTTAACT TCGT GGTTAATGTTGG TTTTTCTGTGGTCAT LVIS_2013 1969343 - 1969161 - | hypothetical protein LVIS_2014 1969902 - 1969357 - | hypothetical protein LVIS_2015 1970172 - 1969915 - | hypothetical protein TERM 2495 1971071 - 1971048 - g 74 -6.7 -4.47183 | opp_overlap 1971056 1971060 TAGCACTTAAACAAA TTGCCGCAC TCAGTG GCGCAGCAA CCATTGGGGTTGTTG TERM 2496 1971241 - 1971265 + G 76 -8.5 -4.06419 | overlap 1971245 GTTCATCCATCTCCC GATTGCGGCTA CCT TAGCCGCTAGC TTCTTTCTAGGAACC TERM 2497 1971245 - 1971261 + G 78 -12.3 -2.73799 | overlap 1971241 ATCCATCTCCCGATT GCGGCTA CCT TAGCCGC TAGCTTCTTTCTAGG TERM 2498 1971314 - 1971300 - g 71 -6.4 -4.14243 | TAGTTTACCGTAAAA TCACGG CTG CCATGA CGACGAGCATTACTG LVIS_2016 1970426 - 1971340 + | hypothetical protein TERM 2499 1971381 - 1971338 - T 100 -16.9 -3.40709 | opp_overlap 1971343, overlap 1971343 ATTACTGAAGAAAAT TAAAAGGCAGGTTCACCGG TATTTT CCGTTGAACCTGCCTTTTT GATTGTTTAACGTTG TERM 2500 1971343 - 1971376 + T 100 -16.8 -5.04356 | opp_overlap 1971338 1971343 TGAAGAAAATTAAAA GGCAGGTTCACCGG TATTTT CCGTTGAACCTGCC TTTTTGATTGTTTAA TERM 2501 1971376 - 1971343 - T 100 -16.8 -4.78029 | opp_overlap 1971343, overlap 1971338 TGAAGAAAATTAAAA GGCAGGTTCACCGG TATTTT CCGTTGAACCTGCC TTTTTGATTGTTTAA asnC 1972826 - 1971435 - | asparaginyl-tRNA synthetase TERM 2502 1972476 - 1972491 + g 83 -4 -5.46706 | GGCCATCGTCCGCAA GTATTC GTAA GAATGC TTTTTCTTTTGCAGT TERM 2503 1972902 - 1972870 - R 100 -7.7 -5.63374 | GCAACACCAAAAAAA GACCCATCATCCCTA TCA CAGGGACGAAAGATC TTTCCGCGGTACCAC TERM 2504 1973677 - 1973650 - R 82 -8.4 -4.2679 | opp_overlap 1973650, overlap 1973651 TAATTCCCATTAAAA CCATTCCTGGCC AGAG GGCCATGAACGA TACTTTGACCGTCAT TERM 2505 1973676 - 1973651 - R 74 -9.7 -3.15592 | opp_overlap 1973650, overlap 1973650 AATTCCCATTAAAAC CATTCCTGGCC AGAG GGCCATGAACG ATACTTTGACCGTCA TERM 2506 1973938 - 1973954 + r 73 -5.1 -4.60889 | overlap 1973940 GCGCAACCATAACGG TTCCTAC AAA GTGGGGA TTTTTAAACATCGTT TERM 2507 1974724 - 1974704 - R 84 -11.2 -3.6292 | opp_overlap 1974706, overlap 1974694 ATAAAGACGCCCAAA GATAGGGC AACCA GCCCTATC CATTGACGATATGTC LVIS_2019 1975310 - 1974744 - | transcriptional regulator LVIS_2020 1975532 - 1975933 + | hypothetical protein TERM 2508 1975976 - 1975943 - T 100 -11.9 -5.49569 | gap 1, opp_overlap 1975943 TATTAATATAAAAAA CATCTCTGCC-CAAGC ATT ACTTGTGACAGAGATG TTTTTTATATGCAAA TERM 2509 1975943 - 1975976 + T 100 -9 -5.36441 | gap 1, opp_overlap 1975943 TATTAATATAAAAAA CATCTCTG-CCCAAG CATTA CTTGTGACAGAGATG TTTTTTATATGCAAA TERM 2510 1976016 - 1975996 - T 100 -12.6 -4.48299 | opp_overlap 1975993 1975992 TTATATGCAAAGAAA CCGCTGTC TCAAT GACAGCGG CACTCGTCTTATCGT LVIS_2021 1976747 - 1976031 - | Solo B3/4 domain-containing protein TERM 2511 1976792 - 1976803 + r 71 -3 -5.07486 | ATCAAGACCTTGCCT CTAT CATA ATAG TTTTTGTTGAAAATG LVIS_2022 1977515 - 1976835 - | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase TERM 2512 1977491 - 1977502 + g 91 -2.2 -5.93809 | ACATTTGAATATAGC GTGG ATAG TCAC TTTTTTTTATCACAA TERM 2513 1977575 - 1977520 - R 100 -15.1 -4.46212 | gap 1, opp_overlap 1977520 TTTTTTATCACAAAA CGAGTCCCCCTATTTTAAGCT-TACT TATAC AGTATAGCTTAAAATGGACGGACTCG TTTGGTGTTTATTTA TERM 2514 1977520 - 1977575 + r 100 -15.1 -4.10269 | gap 1, opp_overlap 1977520 TTTTTTATCACAAAA CGAGTCCCCCTATTTTAAGCT-TACT TATAC AGTATAGCTTAAAATGGACGGACTCG TTTGGTGTTTATTTA LVIS_2023 1978536 - 1977592 - | carbamate kinase LVIS_2024 1979673 - 1978564 - | transaminase LVIS_2025 1981096 - 1979684 - | amino acid transporter TERM 2515 1980984 - 1980962 - G 73 -9.8 -3.31625 | overlap 1980955 1980965 GAAACCAACGACTAA CCAGGCCAGC AGC ACTGGCCCAG CAGCTGCCCCGCCGG TERM 2516 1980981 - 1980965 - G 71 -10.1 -2.82082 | overlap 1980962 1980955 ACCAACGACTAACCA GGCCAGC AGC ACTGGCC CAGCAGCTGCCCCGC TERM 2517 1981158 - 1981132 - R 100 -14.6 -5.13343 | GAATTTAAAATAAAA GAGGGTTAATCA GCA CGATTAACCCTC CTCGACCCTTCAGAT LVIS_2026 1982204 - 1981173 - | ornithine carbamoyltransferase LVIS_2027 1983478 - 1982246 - | arginine deiminase TERM 2518 1983784 - 1983746 - R 100 -12.6 -5.29385 | AATTCAACCAAAAAA TAGACGCCTCAAGAATCA GAT CGATTCTCGAGACACCTA TCGGCGTGCACAATA LVIS_2028 1985372 - 1983810 - | C4-dicarboxylate anaerobic carrier dcuC TERM 2519 1984887 - 1984874 - G 70 -2.4 -4.9218 | TAGCTACCAGAAAAA TGAG GAGGAA CTCA TGGCCTTTCGTCTTT LVIS_2029 1985474 - 1986772 + | Signal transduction histidine kinase LVIS_2030 1986769 - 1987599 + | DNA-binding response regulator LVIS_2031 1987700 - 1989214 + | hypothetical protein LVIS_2032 1989241 - 1990575 + | hypothetical protein TERM 2520 1990581 - 1990637 + T 100 -11.9 -3.92746 | gap 1, opp_overlap 1990586 1990598, overlap 1990583 1990598 TACAGATTAAGACTA TCTAATGTAATCAAAAAGCTTCAGCC ATCTTG GGCCGAAGCTTTTTGATTACACC-GA TATTTTTACCGTGAC TERM 2521 1990583 - 1990636 + T 100 -13.4 -2.95166 | opp_overlap 1990586 1990598, overlap 1990581 1990598 CAGATTAAGACTATC TAATGTAATCAAAAAGCTTCAGCC ATCTTG GGCCGAAGCTTTTTGATTACACCG ATATTTTTACCGTGA TERM 2522 1990633 - 1990586 - T 100 -23.9 -3.137 | opp_overlap 1990583 1990581 1990598, overlap 1990598 ATTAAGACTATCTAA TGTAATCAAAAAGCTTCAGCC ATCTTG GGCCGAAGCTTTTTGATTACA CCGATATTTTTACCG TERM 2523 1990621 - 1990598 - T 100 -10.3 -4.90013 | opp_overlap 1990583 1990581 1990598, overlap 1990586 TAATGTAATCAAAAA GCTTCAGCC ATCTTG GGCCGAAGC TTTTTGATTACACCG TERM 2524 1990598 - 1990621 + T 91 -8.1 -4.8622 | opp_overlap 1990598 1990586, overlap 1990583 1990581 TAATGTAATCAAAAA GCTTCAGCC ATCTTG GGCCGAAGC TTTTTGATTACACCG LVIS_2033 1990859 - 1990665 - | hypothetical protein LVIS_2034 1991022 - 1992188 + | hypothetical protein TERM 2525 1992244 - 1992190 - T 70 -5.2 -4.4204 | gap 1, opp_overlap 1992201, overlap 1992201 AACAACCAGAATAAA TCGACT-TAAAACTGGCTAATCCCA CATGGT TGGGACTAGCCAGTTTTTTAATCCG GATAATGATAAGTTA TERM 2526 1992232 - 1992201 - T 100 -15.3 -4.22346 | opp_overlap 1992201, overlap 1992190 TAAATCGACTTAAAA CTGGCTAATCCCA CATGGT TGGGACTAGCCAG TTTTTTAATCCGGAT TERM 2527 1992201 - 1992232 + T 100 -13.1 -5.14965 | opp_overlap 1992201 1992190 TAAATCGACTTAAAA CTGGCTAATCCCA CATGGT TGGGACTAGCCAG TTTTTTAATCCGGAT LVIS_2035 1992839 - 1992237 - | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein LVIS_2036 1993121 - 1994074 + | protein tyrosine/serine phosphatase TERM 2528 1994111 - 1994150 + F 100 -18 -4.371 | opp_overlap 1994112, overlap 1994112 AGTCTCCACAAATAA AGCGGTCCAGTGAGAATC TTCG GATTCTCACTGGACAGCC TTTTGATATAATAGA TERM 2529 1994112 - 1994149 + F 100 -21.5 -3.21778 | opp_overlap 1994112, overlap 1994111 GTCTCCACAAATAAA GCGGTCCAGTGAGAATC TTCG GATTCTCACTGGACAGC CTTTTGATATAATAG TERM 2530 1994149 - 1994112 - f 100 -21.5 -4.55295 | opp_overlap 1994112 1994111 GTCTCCACAAATAAA GCGGTCCAGTGAGAATC TTCG GATTCTCACTGGACAGC CTTTTGATATAATAG TERM 2531 1994197 - 1994176 - f 100 -8 -5.8901 | ATAGAAAATAAAAAA GGCATCGG TCACAC CCGATACC CACAGATTATCCCCG TERM 2532 1994486 - 1994471 - g 100 -10.4 -4.64861 | GCGCGTGAAAATAAA CCAGCC GGAT GGCTGG TCAGCAACCAAGTTC TERM 2533 1994917 - 1994897 - g 80 -3.1 -5.50723 | overlap 1994899 CCAGCAAAACAAAAA CGTCGCACG TTC CGAGCAAAG AAACGGAAACTAGTT TERM 2534 1995790 - 1995834 + G 75 -10.1 -3.29144 | opp_overlap 1995792, overlap 1995791 1995795 CAACTCCAAGAGCAA AAGAATAGGACGAGAAAACAA AGA TCGGTTTCTCGTCCTATTCCA TTATAAAGAGACTAG TERM 2535 1995791 - 1995833 + G 84 -13.6 -2.57344 | opp_overlap 1995792, overlap 1995790 1995795 AACTCCAAGAGCAAA AGAATAGGACGAGAAAACAA AGA TCGGTTTCTCGTCCTATTCC ATTATAAAGAGACTA TERM 2536 1995832 - 1995792 - g 100 -19.3 -4.43012 | opp_overlap 1995791 1995790 1995795 ACTCCAAGAGCAAAA GAATAGGACGAGAAAACAA AGA TCGGTTTCTCGTCCTATTC CATTATAAAGAGACT TERM 2537 1995795 - 1995829 + G 84 -13 -3.23274 | opp_overlap 1995792, overlap 1995791 1995790 CCAAGAGCAAAAGAA TAGGACGAGAAAACAA AGA TCGGTTTCTCGTCCTA TTCCATTATAAAGAG LVIS_2037 1994228 - 1995883 + | transposase LVIS_2038 1996218 - 1997486 + | major facilitator superfamily permease TERM 2538 1997502 - 1997545 + T 100 -19.2 -3.37796 | opp_overlap 1997508, overlap 1997508 ATTTTTTATGCCGAA CTAAAAGAGGTAATCCAGCT GATT AGCTAGGTTACCTCTTTTAG TTCTAAATCATCAGA TERM 2539 1997508 - 1997539 + T 100 -12.4 -4.50058 | opp_overlap 1997508, overlap 1997502 TATGCCGAACTAAAA GAGGTAATCCAGCT GATT AGCTAGGTTACCTC TTTTAGTTCTAAATC TERM 2540 1997539 - 1997508 - T 100 -12.4 -4.41494 | opp_overlap 1997508 1997502 TATGCCGAACTAAAA GAGGTAATCCAGCT GATT AGCTAGGTTACCTC TTTTAGTTCTAAATC LVIS_2039 1997816 - 1997556 - | hypothetical protein LVIS_2040 1998057 - 1997806 - | hypothetical protein LVIS_2041 1998549 - 1998061 - | acetyltransferase TERM 2541 1998619 - 1998597 - R 77 -6.2 -4.72272 | TTTCCCCACGAAAAA GCCGCCCC CACATAC AGAGCGGC TCATCCAAAGCCAGG LVIS_2042 1999330 - 1998638 - | phosphoglycerate mutase 1 TERM 2542 1999437 - 1999460 + r 73 -3.6 -4.99568 | opp_overlap 1999437, overlap 1999432 TTGAGCCTACAAAAA CGCTCGACCG TTGC CAGCCGCGCG TTTTATTTAATCTTG TERM 2543 1999460 - 1999437 - R 91 -8 -4.85599 | opp_overlap 1999437 1999432 TTGAGCCTACAAAAA CGCTCGACCG TTGC CAGCCGCGCG TTTTATTTAATCTTG LVIS_2043 2001434 - 1999467 - | outer membrane protein TERM 2544 2001028 - 2001051 + g 73 -5.3 -4.50058 | AATGATAGGCTTCCT TGCCGATTT ACAGCG GAGTCGGCA TTTTCATTGTAGGTA TERM 2545 2001717 - 2001685 - R 100 -11.4 -4.72846 | gap 1, opp_overlap 2001684 2001685 TTAGACAGCTAAAAA GGCCTCGCAA-GGAT AACA ATCCCTCGCGAAGCC CTCTTTAAATTGGGT TERM 2546 2001805 - 2001831 + r 80 -10.2 -3.56092 | overlap 2001806 AGGCTTCAGCCCTAT TCATCATCCCGA TCT TCTGGATGATGG TTTCGCCGATACTCG TERM 2547 2001806 - 2001830 + r 80 -11.5 -2.73441 | overlap 2001805 GGCTTCAGCCCTATT CATCATCCCGA TCT TCTGGATGATG GTTTCGCCGATACTC LVIS_2044 2002892 - 2001801 - | permease TERM 2548 2003003 - 2002980 - R 100 -14.6 -4.93696 | opp_overlap 2002978 CGGAAATACTAAAAA GGAACCGGGC GTGG GCCCAGTTCC CAATTTTACGCGTTC LVIS_2045 2004204 - 2003020 - | transcriptional regulator/sugar kinase, xylose operon regulator TERM 2549 2004476 - 2004495 + r 95 -7.2 -5.46706 | ACAATTACCTAATAC CATCAGTT ATTT AGCTGATG TTTTTCTTTTACGAT TERM 2550 2004628 - 2004606 - R 100 -7.8 -5.72622 | opp_overlap 2004608 CTGACAAACAAAAAA GATTCGAG TATCACT CTCGAATC TTCCGGTTTATTGCA LVIS_2046 2005544 - 2004636 - | lipoprotein TERM 2551 2005955 - 2005941 - g 73 -10 -3.40522 | ATTGCGTTAGGAGAA GCCATC ATG GATGGC ACCATTGAAATTGAC LVIS_2047 2005758 - 2006948 + | cyclopropane fatty acid synthase-like protein TERM 2552 2006998 - 2007033 + T 84 -5.4 -5.31275 | opp_overlap 2006999, overlap 2006999 GGCCTCACAGAAAAA ACGCTACCTATCGG ATTGATCA CCGATGGATAGCGA TTTTTTCTAGTGGGA TERM 2553 2006999 - 2007032 + T 78 -8.9 -3.78042 | opp_overlap 2006999, overlap 2006998 GCCTCACAGAAAAAA CGCTACCTATCGG ATTGATCA CCGATGGATAGCG ATTTTTTCTAGTGGG TERM 2554 2007032 - 2006999 - T 100 -8.9 -5.36441 | opp_overlap 2006999 2006998 GCCTCACAGAAAAAA CGCTACCTATCGG ATTGATCA CCGATGGATAGCG ATTTTTTCTAGTGGG TERM 2555 2007057 - 2007074 + T 80 -11.3 -2.64536 | opp_overlap 2007057, overlap 2007054 AGTGGGATTAAAAAA GGCCGTT TCAC AACGGCC TAACTTCATTTACTT TERM 2556 2007074 - 2007057 - T 100 -11.3 -5.14965 | opp_overlap 2007057 2007054 AGTGGGATTAAAAAA GGCCGTT TCAC AACGGCC TAACTTCATTTACTT LVIS_2048 2007445 - 2007098 - | hypothetical protein TERM 2557 2007384 - 2007365 - G 71 -5 -4.60487 | CATTAGGGGTAAAAA TCGTGG AATAAAAG CCACGA AGAAGCCCAGGATGA LVIS_2049 2008263 - 2007463 - | branched-chain amino acid permease (azaleucine resistance) LVIS_2050 2008952 - 2008455 - | sortase related acyltransferase TERM 2558 2009024 - 2009001 - R 100 -11.8 -6.43839 | opp_overlap 2008999 2009019 ATACGAAAAAAAAAA GGACTGTGAC CAAG GTCACAATCC CGATTGTCTGTCTAT LVIS_2051 2010370 - 2009036 - | glutathione reductase LVIS_2052 2011569 - 2011195 - | hypothetical protein TERM 2559 2012025 - 2012060 + r 100 -10.5 -4.71418 | opp_overlap 2012025 TTATACAATTAAAAA TCCCGCCTCATCACA ATGTTA TGTGATAAGACGGGA TTTATTTTACCTGTT TERM 2560 2012060 - 2012025 - R 100 -14.9 -4.96646 | opp_overlap 2012025 TTATACAATTAAAAA TCCCGCCTCATCACA ATGTTA TGTGATAAGACGGGA TTTATTTTACCTGTT LVIS_2054 2015074 - 2012075 - | hypothetical protein TERM 2561 2015321 - 2015297 - R 84 -6.4 -4.93365 | TTGGACAATTAAAAA GCCACCAACC TCAAG GGCTGATGAC CAGTTAACGCTTTTC LVIS_2055 2016659 - 2015340 - | D-alanyl-D-alanine carboxypeptidase LVIS_2056 2017871 - 2016705 - | Signal transduction histidine kinase LVIS_2057 2018638 - 2017949 - | DNA-binding response regulator TERM 2562 2018753 - 2018767 + r 80 -10 -3.69434 | AACCCGAACCTTTAG GTGGCT GTA AGCCAC TTTACCATTCCTTAA TERM 2563 2018904 - 2018870 - R 100 -8 -5.4182 | gap 2 AATCACAAATAAAAA GCCGCCCACTGTAACT TTGCG AGTTAC-G-GGACGGC AGAACTGTTGGATAC LVIS_2058 2020095 - 2018956 - | IMP dehydrogenase/GMP reductase LVIS_2059 2020838 - 2020251 - | hypothetical protein TERM 2564 2020896 - 2020869 - R 100 -12 -5.47159 | gap 1 CTCAATAAAGAAAAA CGAGCG-GGCGCC CTA AGCACCACGCTCG CTCACTGGTATTCCA LVIS_2060 2021657 - 2020926 - | hypothetical protein TERM 2565 2021616 - 2021643 + g 70 -7.7 -3.83226 | gap 1, overlap 2021619 TGTATTGCGACTTTG GTGGACGCC-CG CATTC CGTGGCGTCTGC TTGTTATCACTCATT LVIS_2061 2022775 - 2021675 - | translation-associated GTPase LVIS_2062 2022984 - 2022781 - | hypothetical protein LVIS_2063 2023889 - 2023005 - | Spo0J-like protein LVIS_2064 2024646 - 2023879 - | chromosome partitioning ATPase LVIS_2065 2025497 - 2024661 - | Spo0J-like protein gidB 2026245 - 2025517 - | glucose-inhibited division protein B TERM 2566 2026268 - 2026289 + r 72 -8.1 -3.75229 | overlap 2026269 CTCCCAGTTCGTTTC TGTGAAACA CAAT TGTTTCACG TTTGAGTATACTTTA TERM 2567 2026269 - 2026288 + r 70 -9.4 -2.84414 | overlap 2026268 TCCCAGTTCGTTTCT GTGAAACA CAAT TGTTTCAC GTTTGAGTATACTTT TERM 2568 2026441 - 2026413 - R 72 -7.5 -3.96486 | gap 1, opp_overlap 2026412, overlap 2026403 2026411 AACTACGCAAAAATA GCGATACCC-GT TGGTTG ACGGGGCATCGC CTATACTGAATTCTT LVIS_2067 2027349 - 2026483 - | phosphohydrolase TERM 2569 2027462 - 2027478 + r 79 -6.7 -4.62069 | ATCTCTGTCAACATC TTGTAAA TTT TTTACAA TTTTTCGCATAAAAG TERM 2570 2027495 - 2027512 + r 73 -10.5 -2.50816 | opp_overlap 2027495 2027493 2027494, overlap 2027494 TTTTCGCATAAAAGT GGGGCGG TATA CTGCCCC CTTGATGGCTACCCA LVIS_2068 2027613 - 2027521 - | hypothetical protein TERM 2571 2027724 - 2027749 + r 100 -9 -5.12068 | opp_overlap 2027724, overlap 2027726 TTACTCATACAAAAA GACCAGCAAC ATCGCC GTTGCTGGCC TTTTTGTTCAATCTA TERM 2572 2027749 - 2027724 - R 100 -11.9 -4.99035 | opp_overlap 2027724 2027726 TTACTCATACAAAAA GACCAGCAACA TCGC CGTTGCTGGCC TTTTTGTTCAATCTA TERM 2573 2027726 - 2027747 + r 75 -10.2 -2.78609 | opp_overlap 2027724, overlap 2027724 ACTCATACAAAAAGA CCAGCAAC ATCGCC GTTGCTGG CCTTTTTGTTCAATC LVIS_2069 2028680 - 2027766 - | ribonucleoside hydrolase RihC TERM 2574 2028715 - 2028727 + r 73 -9.1 -3.45031 | opp_overlap 2028712, overlap 2028712 ATTTTGAATTAACGT GCGGT AAA ACCGC TTACGTTTTTACCCA LVIS_2070 2030070 - 2028757 - | xanthine/uracil/vitamin C permease TERM 2575 2029441 - 2029423 - G 85 -7.4 -4.87291 | CACGCCAAGGAAAAA TGCCAACA AAC TGGTGGCA ATAATGGCAATGAAG TERM 2576 2030279 - 2030312 + r 86 -11.7 -3.30443 | gap 1 CTATGCCTAGTGACA CGGATAGCCCAGGAAC AAC GCCCCTGGGCTA-CCG TTAGTCTCATGCTAA TERM 2577 2030314 - 2030337 + r 70 -6 -4.40561 | overlap 2030316 CCCCTGGGCTACCGT TAGTCTCATG CTAA CATGAGGCGA TTATTTTTACCAAAC LVIS_2071 2031603 - 2030344 - | nucleoside permease LVIS_2072 2032717 - 2031893 - | phosphopentomutase TERM 2578 2033046 - 2033035 - H 73 -5.8 -4.45945 | opp_overlap 2033034 ATGTACCAACTAAAA CAGC TAAA GCTG AGTTATGCCAAACAA TERM 2579 2033121 - 2033085 - H 100 -9.7 -4.96848 | opp_overlap 2033089 GTCGCGACATAAAAA CAGACTTCAAGTT GAGTTGCGAAT AACTTGAAGTCTG CTAACTCGCGGAAAG TERM 2580 2033766 - 2033794 + H 100 -14.7 -5.24129 | GGCTCTATGATATTT GGTGTTGATGGAT AAA ATCCATCGACGCC TTTTTTGTAAAACAA TERM 2581 2033830 - 2033818 - H 100 -9.1 -5.1517 | opp_overlap 2033818 AAAACAAACTAAAAA GGGCA TAC TGCCC TGTGCTACAATCAAG TERM 2582 2033953 - 2033975 + G 73 -8.4 -3.89903 | opp_overlap 2033959 2033960, overlap 2033954 2033973 TTTGCGTGTTAGTGA TACTAAGCGC GAT GCGCTTAGAG TTTATGGAACTCTTT LVIS_2073 2033870 - 2035141 + | transposase TERM 2583 2035151 - 2035122 - T 100 -10.8 -4.97158 | overlap 2035117 TCAGATTAAAGAAAA GGAACCCCGTTC GCAAGT GAACGAAGTTCC ACATAAACCCTCCAT TERM 2584 2035223 - 2035195 - T 100 -13.2 -4.6856 | opp_overlap 2035195, overlap 2035197 CAAAGAGCCTAAAAA TACCGCCGACAG GCTAA CTGTCGACGGCA TTTGACGATACATGA TERM 2585 2035195 - 2035223 + T 75 -8.8 -3.57792 | opp_overlap 2035195 2035197 CAAAGAGCCTAAAAA TACCGCCGACAG GCTAA CTGTCGACGGCA TTTGACGATACATGA TERM 2586 2035221 - 2035197 - T 100 -13.6 -3.9442 | opp_overlap 2035195, overlap 2035195 AAGAGCCTAAAAATA CCGCCGACAG GCTAA CTGTCGACGG CATTTGACGATACAT LVIS_2074 2036092 - 2035451 - | saccharopine dehydrogenase related protein TERM 2587 2035576 - 2035591 + g 71 -9 -3.52515 | TCTTCCGTGAGACTT CCGTTC CTTT GAACGG TTCTCCCTTTTGAGT TERM 2588 2036234 - 2036209 - R 100 -11.9 -5.0916 | CCGGGAACACAAAAA GAGCCTGAGAC TTCT GTCCCAGACTC CCGTAATTAATTTCA LVIS_2075 2036530 - 2036264 - | hypothetical protein TERM 2589 2036614 - 2036589 - H 100 -8.9 -5.40464 | opp_overlap 2036593 GATGATAAACAAAAA GGAAGGGTCGC CAGC GCGCCTCTTCC TCGATATCGGCATTT TERM 2590 2037020 - 2037006 - g 71 -7.1 -3.96696 | overlap 2037001 2037010 AAGATGAACACGAAA CCGAG GCCGT CTCGG CAGAAAAATTTCCAG LVIS_2076 2036930 - 2037508 + | hypothetical protein LVIS_2077 2037641 - 2037898 + | hypothetical protein TERM 2591 2037921 - 2037968 + T 100 -23.1 -2.92463 | opp_overlap 2037925, overlap 2037925 ACTCGTTATTAATCT CAAAGAGGGCCCTCAAGAATT TTAACC AATTCTTGGGGGTCCTCTTTG TCTGTCGCTAATAAC TERM 2592 2037964 - 2037925 - T 100 -13.7 -3.67976 | opp_overlap 2037921 2037925 GTTATTAATCTCAAA GAGGGCCCTCAAGAATT TTAACC AATTCTTGGGGGTCCTC TTTGTCTGTCGCTAA TERM 2593 2037925 - 2037964 + T 100 -18.1 -4.1399 | opp_overlap 2037925, overlap 2037921 GTTATTAATCTCAAA GAGGGCCCTCAAGAATT TTAACC AATTCTTGGGGGTCCTC TTTGTCTGTCGCTAA LVIS_2078 2038384 - 2038004 - | transcriptional regulator LVIS_2079 2039106 - 2038612 - | hypothetical protein LVIS_2080 2039405 - 2039211 - | hypothetical protein TERM 2594 2039299 - 2039259 - G 82 -5.5 -5.08088 | AATTCTTAATAAAAA TGACGCCGACCAATCAA TGTCTAG TTGATTCGTTGGCACCA GCCGTTCGACATCTT LVIS_2081 2039690 - 2040331 + | hypothetical protein TERM 2595 2040363 - 2040344 - T 100 -12.2 -5.35815 | opp_overlap 2040344 TAGAGCAAACAAAAA GTCGTCCA TTTG TGGACGAC TTTTTTGATTGGCAA TERM 2596 2040344 - 2040363 + T 100 -12.2 -5.26875 | opp_overlap 2040344 TAGAGCAAACAAAAA GTCGTCCA TTTG TGGACGAC TTTTTTGATTGGCAA LVIS_2082 2042270 - 2040465 - | hypothetical protein TERM 2597 2042506 - 2042480 - R 91 -3.7 -5.75599 | opp_overlap 2042492 TAAATCACAAAAAAA CACCCCGAC TAACCTAGC GTCAAGGTG TTTTTAAAGTACTGT TERM 2598 2042682 - 2042654 - R 100 -12.5 -5.09426 | opp_overlap 2042653 TCCAAGCGCAAAAAA GAACCCCATCCAC AAC GTGAACAGGGTTC CTCTATGTTACCGAT LVIS_2083 2044109 - 2042730 - | hypothetical protein LVIS_2084 2046966 - 2044315 - | hypothetical protein TERM 2599 2047073 - 2047052 - R 95 -7.4 -5.57054 | opp_overlap 2047052, overlap 2047066 AATAATCGAAAAAAA TCCAATTC GTAAAT GAATTGGA TTCTCACAGTAGTTC TERM 2600 2047157 - 2047112 - R 100 -8.6 -4.92314 | opp_overlap 2047125, overlap 2047114 2047125 ATCAATTGACAAAAA TCCTAATAAAAAAGCAATCC GTAAAT GGATTGCTTTTTAATTAATA TAAAACTAAATGGTC TERM 2601 2047155 - 2047114 - R 76 -11.2 -2.71859 | opp_overlap 2047125, overlap 2047112 2047125 CAATTGACAAAAATC CTAATAAAAAAGCAATCC GTAAAT GGATTGCTTTTTAATTAA TATAAAACTAAATGG TERM 2602 2047144 - 2047125 - R 100 -7.9 -5.4756 | opp_overlap 2047125, overlap 2047114 2047112 AATCCTAATAAAAAA GCAATCC GTAAAT GGATTGC TTTTTAATTAATATA TERM 2603 2047125 - 2047144 + r 100 -8.6 -4.91873 | opp_overlap 2047125 2047114 2047112 AATCCTAATAAAAAA GCAATCCG TAAA TGGATTGC TTTTTAATTAATATA LVIS_2085 2048111 - 2047179 - | hypothetical protein LVIS_2086 2048666 - 2048184 - | hypothetical protein TERM 2604 2049164 - 2049140 - R 100 -17.9 -3.75153 | opp_overlap 2049140 CTTCTTTAAGGTAAA GGCCGGCGAAA TGA TCTCGCCGGCC TTTTTGTTTGCCCGT TERM 2605 2049140 - 2049164 + r 100 -15.7 -5.27938 | opp_overlap 2049140 CTTCTTTAAGGTAAA GGCCGGCGAAA TGA TCTCGCCGGCC TTTTTGTTTGCCCGT LVIS_2087 2050407 - 2049190 - | aminotransferase TERM 2606 2050451 - 2050472 + H 71 -4.3 -4.78149 | opp_overlap 2050450 2050451, overlap 2050452 ATCCCCAATTAACAC CCCAGCGAC CACC GTCACTGGC TTTTTCGGTTATAGC LVIS_2088 2050632 - 2051540 + | transcriptional regulator TERM 2607 2051554 - 2051589 + T 100 -13.4 -5.5604 | opp_overlap 2051554 AATCGCACTCAAAAA TCGGTACTCGCAGC CTTAATCC GCTGCCAGTACCGA TTTTTTGTTAATTAC TERM 2608 2051589 - 2051554 - T 100 -13.4 -4.67011 | opp_overlap 2051554 AATCGCACTCAAAAA TCGGTACTCGCAGC CTTAATCC GCTGCCAGTACCGA TTTTTTGTTAATTAC LVIS_2089 2051895 - 2051659 - | hypothetical protein LVIS_2090 2052110 - 2051916 - | hypothetical protein LVIS_2091 2052769 - 2052215 - | DNA-directed RNA polymerase specialized sigma subunit, sigma24-like TERM 2609 2052926 - 2052916 - H 71 -8.2 -3.46914 | opp_overlap 2052917, overlap 2052914 2052917 ATTACCCACCAAATA CCGG GCG CCGG CGCGTTGATCCCCAT TERM 2610 2053112 - 2053128 + G 95 -12.3 -4.258 | AGACATTGGTTACTT GCAGCGA CAA TCGCTGC TTTATTAGTGGGTGG LVIS_2092 2053085 - 2054191 + | hypothetical protein TERM 2611 2054249 - 2054196 - T 90 -12.8 -2.52896 | gap 1, opp_overlap 2054204 2054247, overlap 2054199 2054204 CCACTTTCTAACGTA TAATAAAAGCGAACATCTTCGGTGA GTGGT CCACTGGAGATGTTCGCTTTT-TTA GTTGCGCTAATTCCT TERM 2612 2054247 - 2054199 - T 100 -12.6 -3.41878 | opp_overlap 2054204, overlap 2054196 2054204 CTTTCTAACGTATAA TAAAAGCGAACATCTTCGGTGA GTGGT CCACTGGAGATGTTCGCTTTTT TAGTTGCGCTAATTC TERM 2613 2054204 - 2054242 + T 100 -16.2 -5.27477 | opp_overlap 2054199 2054196 2054204 TAACGTATAATAAAA GCGAACATCTTCGGTG AGTGGTC CACTGGAGATGTTCGC TTTTTTAGTTGCGCT TERM 2614 2054242 - 2054204 - T 100 -12.5 -4.80959 | opp_overlap 2054204, overlap 2054199 2054196 TAACGTATAATAAAA GCGAACATCTTCGGTGA GTGGT CCACTGGAGATGTTCGC TTTTTTAGTTGCGCT TERM 2615 2054375 - 2054411 + T 100 -21.1 -4.36903 | opp_overlap 2054375, overlap 2054366 CTCAATCTCCGATAA CGGCGTTCATGACAC AACTGCA GTGTCATGAACGCCG TTTGTGTTTAATGAG TERM 2616 2054411 - 2054375 - T 100 -21.1 -3.31322 | opp_overlap 2054366 2054375 CTCAATCTCCGATAA CGGCGTTCATGACAC AACTGCA GTGTCATGAACGCCG TTTGTGTTTAATGAG LVIS_2093 2054802 - 2054419 - | hypothetical protein LVIS_2094 2055124 - 2054816 - | hypothetical protein TERM 2617 2056113 - 2056125 + r 71 -9.1 -3.35088 | ATCCGCAACATAGTC CCGGA AAA TCCGG TTGATTAGCAAATTT TERM 2618 2056194 - 2056180 - R 70 -5.6 -4.30576 | opp_overlap 2056191, overlap 2056182 GTGGCACGACTAAAA TACGGG GGT CCCGTG GCACCTCATACTGGC TERM 2619 2056192 - 2056182 - R 75 -8.2 -3.7574 | opp_overlap 2056191, overlap 2056180 GGCACGACTAAAATA CGGG GGT CCCG TGGCACCTCATACTG TERM 2620 2056450 - 2056467 + r 71 -8.5 -3.5525 | opp_overlap 2056452, overlap 2056439 TGCTTGTTCTTATTA TACGAAC ATGA GTTCGTA TTTACAAGCCTGTAT TERM 2621 2056854 - 2056890 + r 86 -8 -4.67968 | opp_overlap 2056854 TTGATTCAAATAAAA GAGGCATCATCCCG CACATAACT CGGAATGACGCCTC TTTGTTGTTTATTCG TERM 2622 2056890 - 2056854 - R 100 -12.4 -4.90778 | opp_overlap 2056854 TTGATTCAAATAAAA GAGGCATCATCCCG CACATAACT CGGAATGACGCCTC TTTGTTGTTTATTCG TERM 2623 2057692 - 2057702 + r 71 -2.4 -5.2112 | overlap 2057683 ACTTCGCCAGTCGCT GGTC GTT GCCC TTTTTTGATGCTCTT TERM 2624 2058679 - 2058655 - R 79 -10.7 -3.05935 | opp_overlap 2058655 2058657 ATACTGGGCATCTAA CCCCCCGATGA TAT TCATCAGGGTG GTCTTCCCCCCACCA TERM 2625 2058657 - 2058677 + r 72 -9.7 -2.73875 | opp_overlap 2058655, overlap 2058655 ACTGGGCATCTAACC CCCCGATGA TAT TCATCAGGG TGGTCTTCCCCCCAC LVIS_2097 2059549 - 2058896 - | thiamine monophosphate synthase LVIS_2098 2060367 - 2059549 - | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase LVIS_2099 2061176 - 2060388 - | hydroxyethylthiazole kinase TERM 2626 2061389 - 2061354 - R 100 -14.1 -4.85599 | gap 1, overlap 2061381 GTTAGGCCATAAAAA GGCCACCGGTGTACTC ACAAA GAGAA-ACCGGTGGCC CGACTATAATTCATT LVIS_2100 2062393 - 2061557 - | short chain dehydrogenase LVIS_2101 2063176 - 2062418 - | ABC-type uncharacterized transport system, permease component LVIS_2102 2063823 - 2063173 - | ABC-type uncharacterized transport system, ATPase component LVIS_2103 2064037 - 2065500 + | tRNA (uracil-5-)-methyltransferase related enzyme LVIS_2104 2065525 - 2066022 + | hypothetical protein TERM 2627 2066080 - 2066034 - T 100 -12.5 -3.69434 | opp_overlap 2066034, overlap 2066037 GTAATTAATCTCAAA TAAGACCGGTCTTTTCGGAAA GTAGA TTTCTGAGAAGACTGGTCTTA TTTTAATTGCACTAA TERM 2628 2066034 - 2066080 + T 100 -19.1 -4.42238 | opp_overlap 2066034 2066037 GTAATTAATCTCAAA TAAGACCGGTCTTTTCGGAAA GTAGA TTTCTGAGAAGACTGGTCTTA TTTTAATTGCACTAA TERM 2629 2066077 - 2066037 - T 86 -9.8 -3.97019 | opp_overlap 2066034, overlap 2066034 ATTAATCTCAAATAA GACCGGTCTTTTCGGAAA GTAGA TTTCTGAGAAGACTGGTC TTATTTTAATTGCAC TERM 2630 2066480 - 2066453 - T 100 -10.6 -5.49729 | AACCAGGCAAAAAAA CCAACCCACACA TGAC CATGCGGGTTGG GCTAATCTAACGGTC LVIS_2105 2066993 - 2066499 - | transcriptional regulator LVIS_2106 2067535 - 2067029 - | hypothetical protein LVIS_2107 2067716 - 2068570 + | hypothetical protein TERM 2631 2068613 - 2068568 - T 100 -12.9 -4.3665 | opp_overlap 2068573, overlap 2068573 GAAGTCAAATATAAA TAAAATAATCAGCCATTTCTC ATCA GAAGAATGGCTGATTATTTTT TACGCCTGTTCTCGC TERM 2632 2068608 - 2068573 - T 100 -12.8 -5.13648 | opp_overlap 2068573, overlap 2068568 CAAATATAAATAAAA TAATCAGCCATTTCTC ATCA GAAGAATGGCTGATTA TTTTTTACGCCTGTT TERM 2633 2068573 - 2068608 + T 100 -12.8 -5.04987 | opp_overlap 2068573 2068568 CAAATATAAATAAAA TAATCAGCCATTTCTC ATCA GAAGAATGGCTGATTA TTTTTTACGCCTGTT LVIS_2108 2069338 - 2068613 - | transcriptional regulator TERM 2634 2069468 - 2069438 - R 100 -8.3 -4.8384 | opp_overlap 2069438, overlap 2069440 GAAATAACCGAAAAA GGCCCAACTCATC GCGAG GATAAGTCGGGTC TTGGTATCTAAGCCG LVIS_2109 2070669 - 2069476 - | transcriptional regulator/sugar kinase, xylose operon regulator TERM 2635 2070156 - 2070142 - G 74 -6.4 -4.4195 | ATACATGGTAGAAAA GACCTG TTC CAAGTC AATGCCAGCCATATC TERM 2636 2070284 - 2070302 + g 74 -9 -3.76968 | opp_overlap 2070283 ACGGCCGCAATGTAG TGATTGAT TTG ATCAATCA TTTCATGGATGGATT TERM 2637 2070946 - 2070925 - R 71 -2.2 -5.18357 | TAAGTGATTAAAAAA CTGCCCAG ATCACA CCAGACAG CTTTCTTTAAATCTA LVIS_2110 2071804 - 2070959 - | aldo/keto reductase LVIS_2111 2073142 - 2071823 - | recombination factor protein RarA TERM 2638 2073236 - 2073213 - R 100 -9.6 -5.24531 | ATTTCGCATAAAAAA GGGCTATGAC CTTC GCCATAACCC TAAAATACGCTACGC LVIS_2112 2074853 - 2073246 - | HD superfamily hydrolase TERM 2639 2074318 - 2074334 + g 70 -8 -3.83502 | overlap 2074302 2074313 TCCGCGTTTGCGACG GCGTTG TCATT CAACGC TTTAATCTCAACATC LVIS_2113 2075669 - 2074971 - | hypothetical protein TERM 2640 2075184 - 2075196 + g 73 -3.3 -4.87626 | overlap 2075185 2075192 CCACGCCCGATAGGT ACTGG TTG CCAGA TTTTTGGTATTGCCC LVIS_2114 2077044 - 2076100 - | alpha/beta fold family hydrolase LVIS_2115 2077169 - 2078977 + | oligoendopeptidase F LVIS_2116 2079045 - 2079464 + | XRE family transcriptional regulator TERM 2641 2079506 - 2079469 - f 100 -12.8 -3.41961 | opp_overlap 2079469 ACGACCATTAATTAA CAGTCGACTGATCAGC GTAACT GCTAGCCAGTCGACTG TTTGCTTGTCTTCAT TERM 2642 2079469 - 2079506 + F 100 -11.3 -4.08823 | opp_overlap 2079469 ACGACCATTAATTAA CAGTCGACTGATCAGCG TAAC TGCTAGCCAGTCGACTG TTTGCTTGTCTTCAT TERM 2643 2079591 - 2079579 - g 73 -3.3 -4.92828 | AAACTCAAAAAGAAA GTCCG CCA CGCAC CGCTTAGTCAACGAC LVIS_2117 2079543 - 2080394 + | SAM-dependent methyltransferase TERM 2644 2080411 - 2080453 + T 100 -13.7 -3.00797 | opp_overlap 2080416, overlap 2080416 TTTGGGCATCATAAG AAAAATGGTCCTTCAGC AGTCAATTC GCTGAAGGACCATTTTC ATTTATCGGTTTAGC TERM 2645 2080416 - 2080448 + T 100 -13.6 -4.62475 | opp_overlap 2080416, overlap 2080411 GCATCATAAGAAAAA TGGTCCTTCAGC AGTCAATTC GCTGAAGGACCA TTTTCATTTATCGGT TERM 2646 2080448 - 2080416 - T 100 -14.3 -5.22006 | opp_overlap 2080416 2080411 GCATCATAAGAAAAA TGGTCCTTCAGCA GTCAATT CGCTGAAGGACCA TTTTCATTTATCGGT LVIS_2118 2081537 - 2080464 - | hypothetical protein LVIS_2119 2083011 - 2081629 - | branched-chain amino acid permease TERM 2647 2082030 - 2082010 - G 74 -3.9 -4.8622 | overlap 2082017 GTTTGCAACCAAAAA CGACAAACC CGT GGTTACTCG TAACCAAAAGCGGTA TERM 2648 2083089 - 2083059 - R 100 -20.6 -4.72486 | CACAAACGTCAAAAA GAGCCCTTCTCCCA CTA TGGGAAAAGGGCTC TACGAGTAGAACGGT LVIS_2120 2084261 - 2083368 - | transcriptional regulator/sugar kinase LVIS_2121 2085612 - 2084251 - | amino acid transporter TERM 2649 2084640 - 2084623 - G 71 -8.5 -3.61764 | opp_overlap 2084615 TGAGTAATTGGGAAA CTTCATC TTAG GATGAAG ATGCGCAAATTTTTT TERM 2650 2084677 - 2084664 - G 70 -8.1 -3.90316 | opp_overlap 2084664, overlap 2084662 ATTTTTTGAAAAACA CGCCA TCCT TGGCG GCGTTATAAGGAATC TERM 2651 2085826 - 2085793 - R 100 -19.1 -2.87564 | opp_overlap 2085797, overlap 2085797 TCAGGTGGCGAGACA CAAAGAGTCCGAAAC TTTT GTCTCGGACTCTTTG CCGCCTATACCGGAT TERM 2652 2085822 - 2085797 - R 100 -14.1 -4.12532 | opp_overlap 2085797, overlap 2085793 GTGGCGAGACACAAA GAGTCCGAAAC TTTT GTCTCGGACTC TTTGCCGCCTATACC TERM 2653 2085797 - 2085822 + r 91 -11.9 -3.56643 | opp_overlap 2085797 2085793 GTGGCGAGACACAAA GAGTCCGAAAC TTTT GTCTCGGACTC TTTGCCGCCTATACC LVIS_2122 2087295 - 2085925 - | branched-chain amino acid permease TERM 2654 2087049 - 2087029 - G 83 -6.7 -4.95876 | overlap 2087032 AACCATAACCAAAAA GAACGCCGC ATA GTGGCGCCC CACCGGTTTGGCTAA TERM 2655 2087046 - 2087032 - G 80 -7 -4.56187 | overlap 2087029 CATAACCAAAAAGAA CGCCGC ATA GTGGCG CCCCACCGGTTTGGC TERM 2656 2087333 - 2087364 + r 100 -14.5 -2.75064 | opp_overlap 2087333, overlap 2087330 2087335 TACTAAACGTTAAAA GAGCCCTTCTCCC ATCAAC GGGAAAAGGGCTC TAATTCAGTAGAACG TERM 2657 2087364 - 2087333 - R 100 -17.4 -4.25074 | opp_overlap 2087333 2087330 2087335 TACTAAACGTTAAAA GAGCCCTTCTCCCA TCAA CGGGAAAAGGGCTC TAATTCAGTAGAACG TERM 2658 2087335 - 2087362 + r 83 -11.3 -2.92192 | opp_overlap 2087333, overlap 2087333 2087330 CTAAACGTTAAAAGA GCCCTTCTCCC ATCAAC GGGAAAAGGGC TCTAATTCAGTAGAA LVIS_2123 2088484 - 2087645 - | site-specific recombinase XerD LVIS_2124 2088663 - 2088508 - | hypothetical protein LVIS_2125 2089029 - 2090321 + | hypothetical protein TERM 2659 2090396 - 2090417 + T 100 -7.3 -5.74684 | opp_overlap 2090396 GCAAGCACCATGGAA CTGTTAGCT TAAC GGCTAGCAG TTTTTATTTTTGTTC TERM 2660 2090514 - 2090496 - T 85 -9.6 -4.1552 | GACTTTGCGAAGAAA GATGTAGC ATT GCTACACC AAAGGCCCCGACTAT TERM 2661 2090518 - 2090546 + T 100 -11 -5.29782 | opp_overlap 2090518 CATTGCTACACCAAA GGCCCCGACTAT GTGGA GTAGTCGAGGCC TTTTTTATACGTCTA TERM 2662 2090546 - 2090518 - T 100 -12.5 -3.83502 | opp_overlap 2090518 CATTGCTACACCAAA GGCCCCGACTA TGTGGAG TAGTCGAGGCC TTTTTTATACGTCTA TERM 2663 2091240 - 2091219 - T 100 -10.9 -5.58179 | GATCATAACAAAAAA GACGCTAGC CACA ACTAGCGTC CCATCAACGTTTCCA LVIS_2127 2091724 - 2091398 - | hypothetical protein LVIS_2128 2091872 - 2092324 + | transcriptional regulator LVIS_2129 2092351 - 2092998 + | hypothetical protein TERM 2664 2093138 - 2093113 - f 71 -6.8 -4.15565 | gap 1, opp_overlap 2093113 2093115, overlap 2093114 CCGACTACCCTAAAA GTCCCCCGAGC TAATT GCTGGGGGG-C TTTTTCGTTATTCAA TERM 2665 2093113 - 2093138 + F 100 -9 -4.99435 | gap 1, opp_overlap 2093113 2093114, overlap 2093115 CCGACTACCCTAAAA GTCCCCCGAGC TAATT GCT-GGGGGGC TTTTTCGTTATTCAA TERM 2666 2093115 - 2093137 + F 82 -10.5 -3.58577 | opp_overlap 2093113 2093114, overlap 2093113 GACTACCCTAAAAGT CCCCCGAGC TAATT GCTGGGGGG CTTTTTCGTTATTCA LVIS_2130 2093242 - 2093805 + | D-alanyl-D-alanine dipeptidase TERM 2667 2093891 - 2093855 - T 100 -12.5 -5.03715 | opp_overlap 2093844 2093855 ACCATTGCTAAAAAA GCGATTCTTACAGAA GTTAACG TTCTGCAAGAACCGC TTTTTTAATTTATCA TERM 2668 2093855 - 2093891 + T 100 -8.1 -5.42514 | opp_overlap 2093855, overlap 2093844 ACCATTGCTAAAAAA GCGATTCTTACAGAA GTTAACG TTCTGCAAGAACCGC TTTTTTAATTTATCA LVIS_2131 2094548 - 2093922 - | hypothetical protein TERM 2669 2094840 - 2094864 + G 85 -7.8 -4.69622 | overlap 2094849 2094860 CCCAGTATGCCATTC TCGGTGGCGG GCGGA TTGCCGCCGA TTTTTCAGCTTATCT LVIS_2132 2094680 - 2095636 + | choloylglycine hydrolase TERM 2670 2096039 - 2096019 - g 78 -5.3 -4.84359 | overlap 2096034 CTACGTCTACAAAAA GGGCGCTTC CAA GAAGATCCC GCGGACCGCTCAAGC LVIS_2133 2095795 - 2096268 + | cell wall-associated hydrolase TERM 2671 2096300 - 2096323 + F 100 -8.9 -5.93809 | opp_overlap 2096300 CGAACGACTTCTAAA CCAGTCACA CTCATC TGTGGCTGG TTTTTTTTGTAAAAA TERM 2672 2096337 - 2096369 + F 75 -10.5 -2.8937 | opp_overlap 2096342, overlap 2096342 GGTTTTTTTTGTAAA AAAAACGCCCGGATC AAC GTCCCGGGCGTTTTG TATCTACGAATATCT TERM 2673 2096364 - 2096342 - f 100 -12.6 -5.75342 | opp_overlap 2096337 2096342 TTTTTGTAAAAAAAA CGCCCGGATC AAC GTCCCGGGCG TTTTGTATCTACGAA TERM 2674 2096342 - 2096364 + F 100 -10.4 -4.60797 | opp_overlap 2096342, overlap 2096337 TTTTTGTAAAAAAAA CGCCCGGATC AAC GTCCCGGGCG TTTTGTATCTACGAA TERM 2675 2096409 - 2096437 + F 100 -14.7 -5.24129 | GGCTCTATGATATTT GGTGTTGATGGAT AAA ATCCATCGACGCC TTTTTTGTAAAACAA TERM 2676 2096473 - 2096461 - f 100 -9.1 -5.1517 | opp_overlap 2096461 AAAACAAACTAAAAA GGGCA TAC TGCCC TGTGCTACAATCAAG TERM 2677 2096536 - 2096546 + F 70 -5.4 -4.43309 | opp_overlap 2096533 2096536 TATGTCCCAAGACCA GTCT ACT AGAC TTTTACTTCAAATTA TERM 2678 2096596 - 2096618 + F 75 -8.4 -3.89903 | opp_overlap 2096602 2096603, overlap 2096597 2096616 TTTGCGTGTTAGTGA TACTAAGCGC GAT GCGCTTAGAG TTTATGGAACTCTTT TERM 2679 2096597 - 2096617 + F 73 -9.7 -2.93219 | opp_overlap 2096602 2096603, overlap 2096596 2096616 TTGCGTGTTAGTGAT ACTAAGCGC GAT GCGCTTAGA GTTTATGGAACTCTT LVIS_2134 2096882 - 2097784 + | transposase TERM 2680 2097794 - 2097765 - T 100 -10.8 -4.97158 | overlap 2097760 TCAGATTAAAGAAAA GGAACCCCGTTC GCAAGT GAACGAAGTTCC ACATAAACCCTCCAT LVIS_2135 2099454 - 2097850 - | polysaccharide transporter LVIS_2136 2100246 - 2099884 - | XRE family transcriptional regulator TERM 2681 2100301 - 2100316 + r 71 -3.3 -5.07107 | opp_overlap 2100303 ATCTTTCAAGCAACC TAGCA ACGATC TGCTA TTTTTTCGCAATTTG TERM 2682 2100498 - 2100477 - R 93 -4.3 -5.79595 | overlap 2100479 CGCCAAAATAAAAAA GGCCGTGAC CTTC GCCACAGAC CTTTCAAAGCCTAAC LVIS_2137 2102491 - 2100521 - | dipeptidyl aminopeptidase/acylaminoacyl-peptidase LVIS_2138 2102653 - 2103582 + | 2-dehydropantoate 2-reductase LVIS_2139 2103763 - 2104047 + | hypothetical protein TERM 2683 2104056 - 2104094 + T 100 -21.9 -3.65313 | opp_overlap 2104037 2104056 TCGCTAACGCAAAAA GGGCGTAGCCGATCGAA TTAAT TTCGATCAGCTACGCCC TTTCACATCTCATTC TERM 2684 2104094 - 2104056 - T 100 -24.1 -4.74103 | opp_overlap 2104056, overlap 2104037 TCGCTAACGCAAAAA GGGCGTAGCCGATCGAA TTAAT TTCGATCAGCTACGCCC TTTCACATCTCATTC TERM 2685 2104172 - 2104143 - T 100 -7.1 -5.89921 | overlap 2104144 ACGACAATAAAAAAA CCGACCAGCACTC CCCC GAGAACTGATCGA TTCGATTTATGAGCT TERM 2686 2104171 - 2104144 - T 79 -8.4 -4.11512 | overlap 2104143 CGACAATAAAAAAAC CGACCAGCACTC CCCC GAGAACTGATCG ATTCGATTTATGAGC LVIS_2140 2104577 - 2104179 - | arsenate reductase TERM 2687 2105471 - 2105491 + G 85 -11.1 -3.794 | overlap 2105478 TAGCAGCGATTGTGA CCCCAACGG ACG CCGTTGCGG TTTCCTCAATTACCA LVIS_2141 2105104 - 2107182 + | NhaP-type Na+/H+ and K+/H+ antiporter TERM 2688 2107353 - 2107384 + F 100 -9.6 -5.55769 | gap 1, opp_overlap 2107352 2107353 ACGTTTTACGTAAAG CGATGACGCAGAC AATTCAG GTCTG-GTCATCG TTTTTTGTTGTCCGG TERM 2689 2107384 - 2107353 - f 70 -9.6 -2.78798 | gap 1, opp_overlap 2107353, overlap 2107352 ACGTTTTACGTAAAG CGATGACGCAGAC AATTCAG GTCTG-GTCATCG TTTTTTGTTGTCCGG TERM 2690 2107770 - 2107788 + G 71 -10.4 -2.91593 | overlap 2107769 CCGAAGGTCCCGTGA TCACCATT GAA AATGGTGA CTTTCTGGAAGGCTC TERM 2691 2108116 - 2108099 - g 100 -9.9 -4.72486 | TATAAATGGGAAAAA GCCACTA ATAT TAGTGGC CTACAATTTGAATCC LVIS_2142 2107616 - 2109193 + | 5'-nucleotidase/2',3'-cyclic phosphodiesterase related esterase TERM 2692 2109242 - 2109200 - f 80 -4.8 -5.24416 | opp_overlap 2109204, overlap 2109204 CAAGCATAAGAAAAA CCAACCAGTGATAGTCGACT TAA AGTCGGTTGTCACTGGTTTT TTGTTAGGTCAAATG TERM 2693 2109204 - 2109238 + F 100 -16.6 -5.4833 | opp_overlap 2109200 2109204 CATAAGAAAAACCAA CCAGTGATAGTCGACT TAA AGTCGGTTGTCACTGG TTTTTTGTTAGGTCA TERM 2694 2109238 - 2109204 - f 86 -10 -3.96481 | opp_overlap 2109204, overlap 2109200 CATAAGAAAAACCAA CCAGTGATAGTCGACT TAA AGTCGGTTGTCACTGG TTTTTTGTTAGGTCA TERM 2695 2109489 - 2109519 + F 100 -10.4 -5.08824 | overlap 2109492 GTTACATAATCTTAG GGGGAGAGTGGGCT TAG GGCCAACTCTCTTC TTTTTTGGATAAGAG TERM 2696 2109492 - 2109516 + F 100 -10.7 -4.64763 | overlap 2109489 ACATAATCTTAGGGG GAGAGTGGGCT TAG GGCCAACTCTC TTCTTTTTTGGATAA TERM 2697 2109725 - 2109712 - g 87 -6.7 -5.16841 | opp_overlap 2109712 GCAGATCAAGAAAAA TCTGG ATAC CCAGA TCATTACGACCCGCC LVIS_2143 2109545 - 2111248 + | arylsulfate sulfotransferase TERM 2698 2111261 - 2111286 + T 100 -11.9 -4.84529 | opp_overlap 2111261 2111263 TAATTCGTCAAAAAA GGGTCTGAGAC AAAA GTCTCAGGCTC TTTTTGCGTTTCTAA TERM 2699 2111286 - 2111261 - T 89 -7.5 -5.03145 | opp_overlap 2111261, overlap 2111263 TAATTCGTCAAAAAA GGGTCTGAGAC AAAA GTCTCAGGCTC TTTTTGCGTTTCTAA LVIS_2144 2112041 - 2111361 - | hypothetical protein TERM 2700 2111950 - 2111936 - G 73 -5.6 -4.59853 | overlap 2111937 GTAACCCTGCAAAAA CGGCCC CGT GAGCCA AGTAAGAATAGGCAT TERM 2701 2112115 - 2112157 + H 88 -9.2 -4.29396 | opp_overlap 2112118, overlap 2112116 2112118 AGGTTAAGAAAACCT AAACGTACCACCCACAAC CTGCTTC GTTGTCGGTGGTACGTCG TTTTACTCACTAGTT TERM 2702 2112116 - 2112156 + H 93 -12.7 -3.16914 | opp_overlap 2112118, overlap 2112115 2112118 GGTTAAGAAAACCTA AACGTACCACCCACAAC CTGCTTC GTTGTCGGTGGTACGTC GTTTTACTCACTAGT TERM 2703 2112154 - 2112118 - H 100 -15.3 -3.99986 | opp_overlap 2112116 2112115 2112118 TTAAGAAAACCTAAA CGTACCACCCACAAC CTGCTTC GTTGTCGGTGGTACG TCGTTTTACTCACTA TERM 2704 2112118 - 2112154 + H 100 -15.3 -3.14218 | opp_overlap 2112118, overlap 2112116 2112115 TTAAGAAAACCTAAA CGTACCACCCACAAC CTGCTTC GTTGTCGGTGGTACG TCGTTTTACTCACTA TERM 2705 2113204 - 2113177 - H 100 -11.4 -5.61596 | ACTTGTACAAAAAAA TCCCATCAGTCA TAAT TGACCGATAGGA TTCACCATAAATTTC TERM 2706 2113584 - 2113574 - g 71 -8.2 -3.68529 | AGTCCACGAGTTAAA CGCG ATA CGCG CCAAAAGATTCAAAA LVIS_2147 2113478 - 2114455 + | catabolite control protein A LVIS_2148 2115079 - 2114447 - | hypothetical protein TERM 2707 2115233 - 2115183 - R 100 -14.4 -4.87626 | gap 1, opp_overlap 2115188 2115189 2115229, overlap 2115189 GCTGAACATTAAAAA TAAAAATAGCGGCTACTGATCAG TTATTT CCG-TCAGTAACCGCTACTTTTA TTAAAATTCATTCTC TERM 2708 2115227 - 2115189 - R 100 -11.2 -5.65496 | gap 1, opp_overlap 2115188 2115189, overlap 2115183 CATTAAAAATAAAAA TAGCGGCTACTGATCAG TTATTT CCG-TCAGTAACCGCTA CTTTTATTAAAATTC LVIS_2149 2115485 - 2115273 - | hypothetical protein LVIS_2150 2116071 - 2115511 - | hypothetical protein LVIS_2151 2116589 - 2116089 - | hypothetical protein LVIS_2152 2117380 - 2116586 - | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase TERM 2709 2117275 - 2117259 - G 74 -10.9 -2.78816 | TCATCCGGGAGCACA CTCACGA CAC TCGTGAG CACACTCAGGCCAAA TERM 2710 2117438 - 2117461 + H 71 -8.2 -3.484 | opp_overlap 2117438 AAGTACAACCACCAA TTGGCTTGTT TTAA AACCAGCCAA TTATGCTATGCTAGA TERM 2711 2117742 - 2117710 - g 100 -9.8 -5.40072 | TCTTGGTCAAAAAAA GAGGCAGCGGGACG TTTGT CGCCCAACTACCTC ACGTCAATCAACTGG LVIS_2153 2117502 - 2118899 + | aminotransferase LVIS_2154 2120066 - 2118906 - | transcriptional regulator LVIS_2155 2120858 - 2120079 - | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component TERM 2712 2120145 - 2120164 + g 83 -10 -4.19817 | CATAATTTGTGATGC CGTCCGTT GTTC AACGGGCG TTTTAAGTCGATACA LVIS_2156 2121669 - 2120875 - | ABC-type anion transport system, duplicated permease component TERM 2713 2120966 - 2120982 + g 71 -10.1 -2.9006 | opp_overlap 2120959 2120958, overlap 2120965 CAGATAATCAATACC CCAGTGG CTT CCGCTGG CTTATTGTCCGTATT TERM 2714 2121257 - 2121244 - G 79 -2.4 -5.37171 | AACATTAAAGAAAAA GTAC CATTGC GTAC CGGTCATAATCAGTG LVIS_2157 2122510 - 2121662 - | ABC-type anion transport system, duplicated permease component TERM 2715 2122695 - 2122666 - R 100 -15.1 -4.2828 | GTTCAGCGACTAAAA GGCCCATCAGC AAACTGCA GCTGATGGGCC TAAACTAAAATGGAT LVIS_2158 2124253 - 2123042 - | cell division membrane protein TERM 2716 2123237 - 2123225 - G 73 -7.7 -3.97308 | overlap 2123233 2123236 TTCAAACATATGAAA CGTCA ACA TGACG GCCACGCCAATTGAG LVIS_2159 2124729 - 2125280 + | hypothetical protein TERM 2717 2125504 - 2125469 - T 100 -16.2 -5.12617 | opp_overlap 2125469 TAAGGATTCAAAAAA CGGCAAACCGCTCTCG TAAT CGAGACTGGTTTGCCG TTTTTTTTGGTCATG TERM 2718 2125469 - 2125504 + T 100 -18.4 -5.88471 | opp_overlap 2125469 TAAGGATTCAAAAAA CGGCAAACCGCTCTCG TAAT CGAGACTGGTTTGCCG TTTTTTTTGGTCATG LVIS_2160 2125995 - 2125603 - | lactoylglutathione lyase related lyase TERM 2719 2125807 - 2125826 + g 74 -9.3 -3.71794 | GCCTGCCGTGGGATT CGTGGGA TCACCT TCCCACG TTTCAATCGTTAAAT LVIS_2161 2126779 - 2125997 - | hypothetical protein LVIS_2162 2127799 - 2126798 - | threonine dehydrogenase related Zn-dependent dehydrogenase LVIS_2163 2128692 - 2127817 - | transcriptional regulator and fructokinase TERM 2720 2128717 - 2128739 + H 71 -6.8 -4.20932 | overlap 2128718 CTCCATATTTACGCC GGGGGCCGTG ACC CGCGGCACCG TTTTGACTAAATGTT TERM 2721 2128718 - 2128738 + H 77 -10.3 -3.11836 | overlap 2128717 TCCATATTTACGCCG GGGGCCGTG ACC CGCGGCACC GTTTTGACTAAATGT LVIS_2164 2129051 - 2129473 + | hypothetical protein TERM 2722 2129475 - 2129528 + T 100 -27.7 -2.98508 | opp_overlap 2129480, overlap 2129480 TCAACCCTGGATAAT AAAAAGCTGGTTGCGGGTCCGCTTG TATT TATGCGGACCCGCAACCAGCTTTTC TAATCTTTTAATTAC TERM 2723 2129523 - 2129480 - T 100 -26.9 -5.18726 | opp_overlap 2129475 2129480 CCTGGATAATAAAAA GCTGGTTGCGGGTCCGCTT GTATTT ATGCGGACCCGCAACCAGC TTTTCTAATCTTTTA TERM 2724 2129480 - 2129523 + T 100 -27.6 -4.60713 | opp_overlap 2129480, overlap 2129475 CCTGGATAATAAAAA GCTGGTTGCGGGTCCGCTTG TATT TATGCGGACCCGCAACCAGC TTTTCTAATCTTTTA LVIS_2165 2130649 - 2129540 - | glycerol dehydrogenase TERM 2725 2130865 - 2130909 + H 100 -16.7 -5.58074 | opp_overlap 2130867, overlap 2130867 GACACGGAAGGGAAA AAGCCTGGGAGATTTTGTCAG TCA TTGACAAAATTTCTCAGGCTC TTTTTTTGATAATTG TERM 2726 2130867 - 2130907 + H 100 -19.3 -4.41456 | opp_overlap 2130867, overlap 2130865 CACGGAAGGGAAAAA GCCTGGGAGATTTTGTCAG TCA TTGACAAAATTTCTCAGGC TCTTTTTTTGATAAT TERM 2727 2130907 - 2130867 - H 100 -14.2 -4.75174 | opp_overlap 2130867 2130865 CACGGAAGGGAAAAA GCCTGGGAGATTTTGTCA GTCAT TGACAAAATTTCTCAGGC TCTTTTTTTGATAAT LVIS_2166 2130960 - 2131286 + | membrane transporter TERM 2728 2131488 - 2131498 + G 71 -8.2 -3.62046 | overlap 2131486 GACCGGAATTGGGGC CGCC GGT GGCG TTCTTACCGGCATGC LVIS_2167 2131288 - 2131602 + | membrane transporter LVIS_2168 2132137 - 2131607 - | acetyltransferase TERM 2729 2132186 - 2132175 - R 82 -2.2 -5.67063 | TCTAGTATAAAAAAA GATG CCCC CACC ACAACCTCAGGGTCA LVIS_2169 2133047 - 2132214 - | phosphoglycerate mutase family protein TERM 2730 2133298 - 2133253 - R 100 -17.2 -3.64703 | opp_overlap 2133247 2133258, overlap 2133254 2133258 GTTCGCCGATTTAAA CCAAAGCTACCATGTTCC AACAATCACA GGAACATGGTAGCTTTGA CTGGACTTTTCAAGA TERM 2731 2133297 - 2133254 - R 100 -18.5 -2.78679 | opp_overlap 2133247 2133258, overlap 2133253 2133258 TTCGCCGATTTAAAC CAAAGCTACCATGTTCC AACAATCACA GGAACATGGTAGCTTTG ACTGGACTTTTCAAG TERM 2732 2133258 - 2133293 + r 100 -13.5 -3.67989 | opp_overlap 2133254 2133253 2133258, overlap 2133247 CCGATTTAAACCAAA GCTACCATGTTCC AACAATCACA GGAACATGGTAGC TTTGACTGGACTTTT TERM 2733 2133293 - 2133258 - R 100 -13.5 -4.08485 | opp_overlap 2133258 2133247, overlap 2133254 2133253 CCGATTTAAACCAAA GCTACCATGTTCC AACAATCACA GGAACATGGTAGC TTTGACTGGACTTTT LVIS_2170 2133495 - 2133259 - | hypothetical protein TERM 2734 2133683 - 2133658 - R 100 -10.4 -5.1244 | opp_overlap 2133674 2133676 TTATCAATACAAAAA GTGGCGACCG TCCGAC CGGCCACCAC AAGTTCGCAAGTCTA TERM 2735 2133715 - 2133736 + r 100 -11.7 -5.88565 | overlap 2133676 2133674 2133709 TGCGGTATTGTGGGG GCTACTTCT TTTT AGAAGTAGC TTTTTTTATTATCCG TERM 2736 2134026 - 2134063 + r 82 -7.8 -4.46404 | gap 1, opp_overlap 2134026, overlap 2134021 TAGCATCCTAGAAAA GGCAACGACTGACGG TCTAAGTTT CCG-CAATCGTTGCC TTTTGGTATTACTTA TERM 2737 2134063 - 2134026 - R 93 -10 -4.40804 | gap 1, opp_overlap 2134026 2134021 TAGCATCCTAGAAAA GGCAACGACTGACGG TCTAAGTTT CCG-CAATCGTTGCC TTTTGGTATTACTTA LVIS_2172 2137403 - 2136351 - | esterase/lipase LVIS_2173 2138845 - 2137466 - | Na+/xyloside symporter related transporter LVIS_2174 2139386 - 2140309 + | IS30 family transposase TERM 2738 2140721 - 2140694 - f 100 -15.8 -3.65351 | opp_overlap 2140694 GTACCGCGAGTGAAA TCGTCCTTATGT TTTT ACATAAGGACGA TTTTTATTTTGAGGA TERM 2739 2140694 - 2140721 + F 100 -15.8 -5.45802 | opp_overlap 2140694 GTACCGCGAGTGAAA TCGTCCTTATGT TTTT ACATAAGGACGA TTTTTATTTTGAGGA LVIS_2175 2140748 - 2142391 + | ABC-type oligopeptide transport system, periplasmic component TERM 2740 2142485 - 2142527 + T 100 -12.9 -5.27206 | opp_overlap 2142485 TTAAGATAGTAAAAA CAGGTCTTAACCGGCGT TTGAAGTGC ACACTGGTTAAGACCTG TTTTTATTGTCTGTG TERM 2741 2142527 - 2142485 - T 100 -12.9 -4.87807 | opp_overlap 2142485 TTAAGATAGTAAAAA CAGGTCTTAACCGGCGT TTGAAGTGC ACACTGGTTAAGACCTG TTTTTATTGTCTGTG LVIS_2176 2143081 - 2142581 - | hypothetical protein TERM 2742 2142757 - 2142767 + g 75 -5.4 -4.72127 | opp_overlap 2142743 2142742, overlap 2142743 TCCGGGCTTTCACCC GGTA AGT TACC TTCTTTTTATTGTTA LVIS_2177 2143586 - 2143098 - | hypothetical protein TERM 2743 2143810 - 2143768 - R 85 -5.7 -5.08824 | gap 2, opp_overlap 2143807, overlap 2143769 TGTCCATTCAAAAAA TGGCGCCTAAC--TACTCC TTCTGGT GGAGCATCGTTAGGCGCCT AATAATCGGCTTAGC TERM 2744 2143809 - 2143769 - R 78 -9.2 -3.64812 | gap 2, opp_overlap 2143807, overlap 2143768 GTCCATTCAAAAAAT GGCGCCTAAC--TACTCC TTCTGGT GGAGCATCGTTAGGCGCC TAATAATCGGCTTAG LVIS_2178 2144819 - 2143821 - | transcriptional regulator TERM 2745 2144767 - 2144790 + g 71 -8.8 -3.65313 | gap 1, overlap 2144767 AATACACGTGAGACT GT-GGCCGGTG ACA CCCCGGCCAAC TTTGCAATATCCTTG TERM 2746 2145796 - 2145808 + G 85 -10.5 -4.10657 | opp_overlap 2145795 GCATTTAGTTAAGAC GGCGC CCC GCGCC TTTTGGGAAGTCTCC LVIS_2179 2145014 - 2146396 + | major facilitator superfamily permease LVIS_2180 2146417 - 2148090 + | trehalose-6-phosphate hydrolase TERM 2747 2148143 - 2148117 - T 75 -5.3 -4.7629 | gap 2, opp_overlap 2148117 2148126 CGATTAATCCAAAAA CAGCGGTAACCAT GGT ATGGTT-C-GCTG TTTTTTTCTGTTATT TERM 2748 2148117 - 2148143 + T 95 -5.3 -5.86465 | gap 2, opp_overlap 2148117, overlap 2148126 CGATTAATCCAAAAA CAGCGGTAACCAT GGT ATGGTT-C-GCTG TTTTTTTCTGTTATT LVIS_2181 2148811 - 2148161 - | hypothetical protein TERM 2749 2148942 - 2148962 + H 74 -10.5 -2.71712 | overlap 2148941 2148944 ATAGCTTAACCCTTC GAGTTAGTG GAA CGCTAACTC ATTTAAAGGAGGACC LVIS_2182 2148982 - 2149404 + | transcriptional regulator TERM 2750 2149479 - 2149447 - f 100 -10.6 -4.70659 | opp_overlap 2149447 2149446 2149449 GTTCACACCTAAAAA CACGCTCCTCCCGA AATGA TCTGGAAGAACGTG CTTTTCAGGTGCCAC LVIS_2183 2150239 - 2150562 + | hypothetical protein TERM 2751 2150617 - 2150585 - T 100 -15 -4.66163 | gap 1, opp_overlap 2150585 ACTCGCACTCAAAAA TGAGCCGCCC-TCTA ATCA CAGAAGGGCGGCTCA TTTTTGGTCGGCCAC TERM 2752 2150585 - 2150617 + T 100 -14.3 -4.72272 | gap 1, opp_overlap 2150585 ACTCGCACTCAAAAA TGAGCCGCCCT-CT AATCAC AGAAGGGCGGCTCA TTTTTGGTCGGCCAC LVIS_2184 2151854 - 2150664 - | NADH:flavin oxidoreductase LVIS_2185 2152121 - 2151945 - | hypothetical protein TERM 2753 2152195 - 2152174 - R 100 -10.9 -5.81032 | opp_overlap 2152174 2152173 2152177 TAACCTCAAAAAAAA GAAGGCACT TTAA AGTGCCTCC GTTGGTTGGTTTAAA LVIS_2186 2152569 - 2152183 - | transcriptional regulator LVIS_2187 2152706 - 2153788 + | microcin C7 resistance MccF related protein rihB 2154725 - 2153793 - | ribonucleoside hydrolase 2 LVIS_2189 2154826 - 2155506 + | DNA-binding transcriptional activator YeiL TERM 2754 2155537 - 2155560 + T 100 -11 -4.96848 | opp_overlap 2155537 CAATCAACATAAAAA CTGCGAACTC AAAC GCGTTCGCAG TTTTTATGTGCCCCG TERM 2755 2155560 - 2155537 - T 100 -11 -5.1485 | opp_overlap 2155537 CAATCAACATAAAAA CTGCGAACTC AAAC GCGTTCGCAG TTTTTATGTGCCCCG LVIS_2190 2156554 - 2155577 - | Co/Zn/Cd cation transporter LVIS_2191 2156870 - 2158042 + | 1,3-propanediol dehydrogenase TERM 2756 2158082 - 2158064 - f 100 -12.4 -4.35461 | opp_overlap 2158064 GTAATATGATGAAAA GCCGCCGA ATT TCGACGGC TTTTTTAGTGTTTGT TERM 2757 2158064 - 2158082 + F 100 -10.2 -5.34055 | opp_overlap 2158064 GTAATATGATGAAAA GCCGCCGA ATT TCGACGGC TTTTTTAGTGTTTGT LVIS_2192 2158094 - 2158786 + | HAD superfamily hydrolase TERM 2758 2158808 - 2158840 + T 86 -7 -5.055 | opp_overlap 2158809, overlap 2158809 CTACCTGCTAAAAAA ACTAGGCAATGTCC CCTAC GGACACTGTCTAGC TTTTTTAAGCATTGG TERM 2759 2158839 - 2158809 - T 100 -10.5 -5.41143 | opp_overlap 2158808 2158809 TACCTGCTAAAAAAA CTAGGCAATGTCC CCTAC GGACACTGTCTAG CTTTTTTAAGCATTG TERM 2760 2158809 - 2158839 + T 82 -10.5 -3.62577 | opp_overlap 2158809, overlap 2158808 TACCTGCTAAAAAAA CTAGGCAATGTCC CCTAC GGACACTGTCTAG CTTTTTTAAGCATTG LVIS_2193 2159477 - 2158845 - | hypothetical protein TERM 2761 2159833 - 2159817 - g 71 -6.5 -4.19735 | overlap 2159802 2159801 2159797 2159794 GCCGCTAAAATCAAA GCGGC CGTACTC GCCGC TCAGGCTGGTCAATT LVIS_2194 2159592 - 2159984 + | Phage envelope protein TERM 2762 2160039 - 2160015 - T 100 -10 -4.8622 | opp_overlap 2160015 TTGGCTAATCAAAAA GTTGCGGCTT GAAAT AGGCCGCAAC TTTTTACTTTTTCGC TERM 2763 2160015 - 2160039 + T 100 -12.9 -5.18355 | opp_overlap 2160015 TTGGCTAATCAAAAA GTTGCGGCTTG AAA TAGGCCGCAAC TTTTTACTTTTTCGC LVIS_2195 2160579 - 2160043 - | phospholipid-binding protein TERM 2764 2160645 - 2160665 + r 100 -14.1 -5.57054 | opp_overlap 2160645 TTAAGCACATAAAAA CGTCTGGAA AAA TTCCAGACG TTTTTTTAACTTATT TERM 2765 2160665 - 2160645 - R 100 -14.1 -5.04175 | opp_overlap 2160645 TTAAGCACATAAAAA CGTCTGGAA AAA TTCCAGACG TTTTTTTAACTTATT LVIS_2196 2161938 - 2160676 - | D-xylose proton-symporter TERM 2766 2162120 - 2162106 - R 71 -8.6 -3.55071 | CCATATCCTTGTAAA CGCTTA CTA TAAGCG GTCGCACCCGGTTTG TERM 2767 2162213 - 2162194 - R 100 -11.4 -5.1485 | opp_overlap 2162193 2162192 GAACTAACACAAAAA GGCCGCCT ACTA AAGCGGCC AATTACTAGATTAAA LVIS_2197 2162980 - 2162297 - | peptide ABC transporter ATPase LVIS_2198 2164050 - 2162992 - | peptide ABC transporter permease LVIS_2199 2164575 - 2164054 - | transcriptional regulator TERM 2768 2164443 - 2164433 - G 70 -2.4 -4.89339 | AAGTATTTATAAAAA GCAC CAC GGGC AATTCCTGCCGTCTT TERM 2769 2164658 - 2164608 - R 70 -9.9 -2.53263 | gap 1 CTCAGCCTTAAGTGA CACGGCGTCACTTAAGATTGAAAT GAGT ATAGCA-TCTTGAGTGACACCGTG TCAACTTAAAGGCAA TERM 2770 2164699 - 2164679 - R 100 -8.4 -5.58209 | opp_overlap 2164678 2164681 TTAAAGGCAAAAAAA TAGTTACC TGGAT GGTAACTA CCTTTAACGACGCCA LVIS_2200 2165905 - 2164715 - | major facilitator superfamily permease LVIS_2201 2166504 - 2166007 - | hypothetical protein TERM 2771 2166680 - 2166651 - R 100 -12.3 -5.67063 | opp_overlap 2166650 2166649 GCGACCATAAAAAAA CGTGATACCACTA AAAT TAGTCGTATCACG CGTTTGAAAACTAGA LVIS_2202 2167662 - 2166691 - | malate permease LVIS_2203 2169400 - 2167769 - | malate dehydrogenase LVIS_2204 2169539 - 2170426 + | malolactic fermentation system transcription activator TERM 2772 2170490 - 2170443 - T 100 -14.4 -4.26903 | opp_overlap 2170443 CCCATCGTACTAAAA CGAGTGACAATAACAGGCCATT AGGA AACGGTCTATCATTATCACTCG TTTGTCTGTGTAATA TERM 2773 2170443 - 2170490 + T 76 -7.8 -4.18367 | opp_overlap 2170443 CCCATCGTACTAAAA CGAGTGACAATAACAGGCCATT AGGA AACGGTCTATCATTATCACTCG TTTGTCTGTGTAATA LVIS_2205 2171360 - 2170551 - | transcriptional regulator TERM 2774 2171012 - 2171028 + g 74 -10.9 -2.92192 | opp_overlap 2171015, overlap 2170995 2171008 GCGCCAATCGGTCAA CCACTTG GCG CAAGTGG TCTGGTTGAATCACC LVIS_2206 2172469 - 2171357 - | peptidylarginine deiminase-like protein TERM 2775 2171853 - 2171871 + g 71 -3 -4.9218 | overlap 2171855 TCGTCCATAAAGTAG CCATGTGG CAG CCACACCG TTTTTGTAATCCCTA LVIS_2207 2173437 - 2172493 - | carbamate kinase TERM 2776 2173488 - 2173467 - R 100 -12.3 -4.37886 | TTATCTTTCATAAAA GGGTCAGGC TTCC ACCTGACCC TCCCGTCCTATTCAA LVIS_2208 2174598 - 2173504 - | agmatine deiminase LVIS_2209 2176010 - 2174625 - | amino acid transporter LVIS_2210 2177098 - 2176055 - | putrescine carbamoyltransferase TERM 2777 2177463 - 2177435 - R 100 -11.8 -4.55689 | opp_overlap 2177434 ATTACGTATATAAAA GCGCCCAATTCC ATCAG GAAATTGAGCGC CCTATTATTTTTATT LVIS_2211 2178924 - 2177494 - | Na+/H+ antiporter TERM 2778 2178973 - 2178954 - R 91 -8.6 -4.62069 | opp_overlap 2178954 2178953 CCTTTACGCCAAAAA GGCTTACC AACA AGTAAGCC CTTTTGCCGAATCAA LVIS_2212 2180415 - 2178994 - | amino acid transporter LVIS_2213 2182385 - 2180505 - | glutamate decarboxylase TERM 2779 2182556 - 2182529 - R 100 -16.4 -4.43213 | opp_overlap 2182550 2182552, overlap 2182552 TTTAAGATACGAAAA GCGGGCCTGATA CGAC TATCAGACCCGC TAACGGGTATTACAT LVIS_2214 2183848 - 2182592 - | tyrosyl-tRNA synthetase LVIS_2215 2184267 - 2184019 - | hypothetical protein TERM 2780 2184378 - 2184351 - R 95 -7.8 -5.01042 | AATCCAAACTAAAAA CGCCATATGG AGATTCGA CCATATGACG CCAAGTTAACGCTAT LVIS_2216 2184667 - 2184407 - | hypothetical protein LVIS_2217 2184877 - 2184719 - | hypothetical protein TERM 2781 2184946 - 2184913 - H 100 -14 -5.27779 | opp_overlap 2184909 TTTAACATCAAAAAA GGCGTCCTTTCTAT ACTAAA ATAGAAGGGACGCC TTAGCGCGGTACCAC LVIS_2218 2185363 - 2186532 + | Acetyl-CoA acetyltransferase LVIS_2219 2186583 - 2186774 + | hypothetical protein TERM 2782 2186788 - 2186824 + T 100 -10.8 -4.70266 | gap 1, opp_overlap 2186788 GAAACTTCAACAAAA CCGGCCCTGCCA-GGCG TTTA TGCCCTGACAGTGCCGG TTTTTCGATGATGTT TERM 2783 2186824 - 2186788 - T 100 -13 -4.6971 | opp_overlap 2186788 GAAACTTCAACAAAA CCGGCCCTGCCAGG CGTTTATGC CCTGACAGTGCCGG TTTTTCGATGATGTT LVIS_2220 2187734 - 2186844 - | DMT family permease LVIS_2221 2187919 - 2189424 + | Alpha-L-arabinofuranosidase TERM 2784 2189465 - 2189436 - T 95 -8 -5.1861 | gap 1, opp_overlap 2189436 TTGATCACTAAAAAA CCATCATGCC-CT GATAG AGAGACATGATGG TTTTCACTCATTTTA TERM 2785 2189436 - 2189465 + T 70 -5.8 -4.27686 | gap 1, opp_overlap 2189436 TTGATCACTAAAAAA CCATCATG-CCCT GATAG AGAGACATGATGG TTTTCACTCATTTTA LVIS_2222 2189744 - 2189478 - | hypothetical protein LVIS_2223 2190009 - 2189758 - | hypothetical protein TERM 2786 2190205 - 2190172 - R 100 -13.2 -3.93061 | opp_overlap 2190174, overlap 2190166 2190174 ATTTGAAAACGCAAA CAGGGCCCGGGACT TTGATC AGTCCCAGACCCTA TGCTGGTATTTTTTA TERM 2787 2190174 - 2190203 + r 70 -9.2 -2.89564 | opp_overlap 2190172 2190166 2190174 TTGAAAACGCAAACA GGGCCCGGGACT TTGATC AGTCCCAGACCC TATGCTGGTATTTTT TERM 2788 2190203 - 2190174 - R 100 -13.6 -3.54879 | opp_overlap 2190174, overlap 2190172 2190166 TTGAAAACGCAAACA GGGCCCGGGACT TTGATC AGTCCCAGACCC TATGCTGGTATTTTT LVIS_2224 2190622 - 2190221 - | hypothetical protein LVIS_2225 2191661 - 2190798 - | AraC-type DNA-binding protein TERM 2789 2192374 - 2192355 - g 80 -6.4 -4.7497 | CGCATGGATGAAAAA CACAGGTC ATTT GACCCATG GTGGTCATCTGCGGT LVIS_2226 2191843 - 2193375 + | O-glycosyl hydrolase TERM 2790 2193421 - 2193383 - f 100 -10.5 -4.90869 | gap 1, opp_overlap 2193383, overlap 2193385 AGCATTAATCAAAAA GTCAGTCACACTTTCTCA ATAT CGA-AAAGTGTGACTGGC TTTTTAATATGCTAC TERM 2791 2193383 - 2193421 + F 100 -12 -4.82667 | gap 1, opp_overlap 2193383 2193385 AGCATTAATCAAAAA GTCAGTCACACTTTCTC AATATC GA-AAAGTGTGACTGGC TTTTTAATATGCTAC TERM 2792 2193419 - 2193385 - f 80 -11.7 -2.71339 | gap 1, opp_overlap 2193383, overlap 2193383 CATTAATCAAAAAGT CAGTCACACTTTCTCA ATAT CGA-AAAGTGTGACTG GCTTTTTAATATGCT TERM 2793 2193782 - 2193798 + G 73 -5.1 -4.52047 | overlap 2193783 ACGTTCGCCATAATC TCCGGAT TCT ATCTGGG TTTTATGGTCTGCTA LVIS_2227 2193478 - 2194218 + | hypothetical protein LVIS_2228 2194876 - 2194244 - | orotate phosphoribosyltransferase LVIS_2229 2195592 - 2194873 - | orotidine-5'-phosphate decarboxylase TERM 2794 2195647 - 2195618 - H 100 -15.8 -5.40072 | CTTTCTTCAAAAAAA GCCGGTTAGCCC CGTATT AGGCTAACCGGC TATAGACCCACTCAT LVIS_2230 2195891 - 2197114 + | major facilitator superfamily permease TERM 2795 2197159 - 2197122 - T 74 -9.3 -3.27476 | gap 1, opp_overlap 2197127 2197156, overlap 2197127 ATCCTTAACCACTAA CAAAATGGCGATGCC-CA CAT TGAGGTATCGCCATTTTT TGCTGAAAAATTTCA TERM 2796 2197127 - 2197154 + T 100 -11.4 -5.14563 | gap 1, opp_overlap 2197122 2197127 TAACCACTAACAAAA TGGCGATGCC-CA CAT TGAGGTATCGCCA TTTTTTGCTGAAAAA TERM 2797 2197154 - 2197127 - T 100 -9.2 -4.75219 | gap 1, opp_overlap 2197127, overlap 2197122 TAACCACTAACAAAA TGGCGATGCC-CA CAT TGAGGTATCGCCA TTTTTTGCTGAAAAA LVIS_2231 2197926 - 2197207 - | hypothetical protein LVIS_2232 2198818 - 2197919 - | alpha/beta fold family hydrolase TERM 2798 2198909 - 2198888 - R 78 -7.3 -4.53475 | ATTTCACAAAAATAA GATCGGAAT TTTC ATCCCGACC CCCTAACCAATTAAG LVIS_2233 2199798 - 2198920 - | ribokinase family sugar kinase LVIS_2234 2201164 - 2199791 - | purine-cytosine permease related protein LVIS_2235 2202189 - 2201185 - | ADP-ribosylglycohydrolase LVIS_2236 2202905 - 2202213 - | transcriptional regulator LVIS_2237 2204015 - 2203134 - | DNA alkylation repair enzyme TERM 2799 2204062 - 2204043 - R 100 -7.8 -5.37593 | opp_overlap 2204043 CTCTAAACTAAAAAA GCCGCTGC CTAC GCAACGAC TCCTTAATCAATATA LVIS_2238 2204759 - 2204085 - | GMP synthase glutamine amidotransferase subunit TERM 2800 2204366 - 2204385 + g 72 -5.8 -4.46212 | gap 1, opp_overlap 2204375 CAAACATTTCTTCGT GC-CAATGT AGC ACATTGAGC TTTTCTGGTAGGCCG TERM 2801 2204525 - 2204509 - G 77 -8.7 -4.18506 | opp_overlap 2204508 2204509 TGAGCCCCAAAACAA GCGCCAA ACA TTGGCAC ATCTTTATCCAAGAG LVIS_2239 2206797 - 2204842 - | translation elongation factor (GTPase) LVIS_2240 2207025 - 2208236 + | aminotransferase TERM 2802 2208296 - 2208255 - T 70 -8.1 -3.59979 | opp_overlap 2208241 2208259, overlap 2208257 2208258 GTGTTTCATGTGAAA CATTGTGCCGGCTTAAT TTGTAATT ATTAAGCCGGCACTTTA TGTTATTTGATATCG TERM 2803 2208293 - 2208258 - T 83 -12 -2.62613 | opp_overlap 2208259, overlap 2208257 2208255 TTTCATGTGAAACAT TGTGCCGGCTTAAT TTGTAATT ATTAAGCCGGCACT TTATGTTATTTGATA TERM 2804 2208259 - 2208292 + T 100 -15.5 -4.41237 | opp_overlap 2208258 2208257 2208255 TTCATGTGAAACATT GTGCCGGCTTAAT TTGTAATT ATTAAGCCGGCAC TTTATGTTATTTGAT LVIS_2241 2209090 - 2208323 - | 3-oxoacyl-acyl carrier protein reductase LVIS_2242 2209223 - 2209759 + | transcriptional regulator TERM 2805 2209837 - 2209801 - f 80 -4.5 -5.09762 | opp_overlap 2209802 2209810, overlap 2209796 2209802 2209805 TTCCAATAAATAAAA GCAGGAAAAATTCTCAA TTT TTGAGGACTTTTCTTGT TTTTCTATAGAATTC TERM 2806 2209836 - 2209802 - f 70 -8 -3.64772 | opp_overlap 2209802 2209810, overlap 2209801 2209796 2209805 TCCAATAAATAAAAG CAGGAAAAATTCTCAA TTT TTGAGGACTTTTCTTG TTTTTCTATAGAATT TERM 2807 2209802 - 2209836 + F 100 -10.2 -4.98522 | opp_overlap 2209802 2209801 2209796 2209805, overlap 2209810 TCCAATAAATAAAAG CAGGAAAAATTCTCAA TTT TTGAGGACTTTTCTTG TTTTTCTATAGAATT TERM 2808 2209810 - 2209828 + F 71 -2.4 -5.18715 | opp_overlap 2209805 2209802 2209801 2209796, overlap 2209802 ATAAAAGCAGGAAAA ATTCTCAA TTT TTGAGGAC TTTTCTTGTTTTTCT LVIS_2243 2209992 - 2210408 + | hypothetical protein TERM 2809 2210449 - 2210418 - T 100 -13.1 -4.88228 | opp_overlap 2210418 ACCTAATATTAAAAA TACCGTTGCTGGG AATAAA CCTAGCAACGGTA TTTTTAATAATTACT TERM 2810 2210418 - 2210449 + T 100 -15.3 -4.81685 | opp_overlap 2210418 ACCTAATATTAAAAA TACCGTTGCTGGG AATAAA CCTAGCAACGGTA TTTTTAATAATTACT LVIS_2244 2211623 - 2210463 - | major facilitator superfamily permease TERM 2811 2210890 - 2210876 - G 73 -8.6 -3.9398 | opp_overlap 2210875 2210872 TCAGAATGCCAGAAA TCAGTG GGC CACTGA ATCCTTTAGCAGTCA TERM 2812 2211651 - 2211631 - R 70 -7.5 -3.82031 | TTAACCATTATCAAA CGCCTCCAA GGA TTGGCGACG ACAAAAAAGACGGTG TERM 2813 2211683 - 2211660 - R 100 -8.8 -5.31275 | GGCGACGACAAAAAA GACGGTGCTC TAAA GCACACCGTC CGTGAACACATGAAC LVIS_2245 2212561 - 2211926 - | acetyltransferase TERM 2814 2212685 - 2212660 - R 100 -7.7 -5.4756 | AATCCTAATAAAAAA CACCTAAATCT GCGA AGATCTAGATG CTTCATAAGCCCACG TERM 2815 2213736 - 2213750 + r 73 -7.1 -4.13767 | opp_overlap 2213735, overlap 2213735 TAACGTTATAATTAG CCAGC GCATG GCTGG TTTTGACCTGGGCGG TERM 2816 2214152 - 2214109 - R 100 -16.2 -4.28548 | opp_overlap 2214109 2214112 ATTGAGCCATCAAAA TAAGCGGGAAAGTAAGTTCT TCTA AGAACGTGCTTTCCCGCCTA TTATTCGATAACCAC TERM 2817 2214109 - 2214152 + r 100 -16.2 -3.67597 | opp_overlap 2214109, overlap 2214112 ATTGAGCCATCAAAA TAAGCGGGAAAGTAAGTTCT TCTA AGAACGTGCTTTCCCGCCTA TTATTCGATAACCAC TERM 2818 2214112 - 2214149 + r 100 -17.9 -2.64872 | opp_overlap 2214109, overlap 2214109 GAGCCATCAAAATAA GCGGGAAAGTAAGTTCT TCTA AGAACGTGCTTTCCCGC CTATTATTCGATAAC LVIS_2247 2214836 - 2214198 - | carbonic anhydrase TERM 2819 2215756 - 2215738 - g 79 -9.5 -3.92592 | ATCCCCAATATGAAA GCCAGCG CCATT CGCCGGC CCACTTCCCTCATTA TERM 2820 2215802 - 2215788 - g 80 -2.9 -5.42259 | opp_overlap 2215788 CTACGCGCAAAAAAA TCATA AGCAA TATGA TATTATTTTTGTTGA LVIS_2248 2215456 - 2216619 + | thymidine kinase TERM 2821 2216638 - 2216667 + F 100 -15.8 -4.50976 | opp_overlap 2216638 ATCAATTAAACGAAA CCGGCCATCGGA TTCCCT TTCGATGGCCGG TTTTATGCTATCAGG TERM 2822 2216667 - 2216638 - f 100 -13.6 -4.15201 | opp_overlap 2216638 ATCAATTAAACGAAA CCGGCCATCGGA TTCCCT TTCGATGGCCGG TTTTATGCTATCAGG LVIS_2249 2216763 - 2216966 + | transcriptional regulator LVIS_2250 2216963 - 2217397 + | hypothetical protein TERM 2823 2217488 - 2217449 - T 100 -19.4 -4.2803 | opp_overlap 2217449 CATGCTAATCCAAAA GCGCGCCCACATCTGATA AATT CATCAGAAATGGGCGCGC TTTTTCGTCATCACT TERM 2824 2217449 - 2217488 + T 100 -16.5 -4.77438 | opp_overlap 2217449 CATGCTAATCCAAAA GCGCGCCCACATCTGAT AAATTC ATCAGAAATGGGCGCGC TTTTTCGTCATCACT LVIS_2251 2219451 - 2217505 - | hypothetical protein LVIS_2252 2219703 - 2220302 + | flavoprotein TERM 2825 2220600 - 2220577 - g 91 -13.2 -3.40639 | gap 1 AATCTTACCAAGTAA TGGCTGACGCC TTA GGCGTC-GCCA AAGCTACGATTAGCT TERM 2826 2220694 - 2220724 + G 70 -7.7 -3.91084 | gap 1 GGCGGAATTGCGGTC GTCGTTCGATGCTG ACGG CAGCATT-AGCGAC TTTAATTACCAATCA LVIS_2253 2220495 - 2221415 + | IS30 family transposase TERM 2827 2222188 - 2222146 - T 100 -29.6 -4.98436 | opp_overlap 2222146 TGAACATTACAAAAA TAGTACAAGAGACCAGGTCA GAT TGACCTGGTCTCTTGTACTA TTTTTATTTAGATTA TERM 2828 2222146 - 2222188 + T 100 -29.6 -5.33026 | opp_overlap 2222146 TGAACATTACAAAAA TAGTACAAGAGACCAGGTCA GAT TGACCTGGTCTCTTGTACTA TTTTTATTTAGATTA LVIS_2254 2223029 - 2222214 - | ABC-type maltose transport system, permease component LVIS_2255 2223887 - 2223033 - | ABC-type sugar transport system, permease component TERM 2829 2223697 - 2223681 - G 76 -2.3 -5.34857 | TGAAACAAAAGAAAA TTTAACT GTT AGCCAAA AACTCTGCAGAAAGG LVIS_2256 2225191 - 2223893 - | ABC-type sugar transport system, periplasmic component TERM 2830 2225168 - 2225181 + g 91 -3.9 -5.62219 | AAAAGTTAGCTTAGC GATTT TAAA AAATC TTTTTTTCATGTCTT TERM 2831 2225391 - 2225372 - g 73 -7.2 -4.1585 | overlap 2225389 TGATAATGCGGAAAA TGATACCC TAAA GGATATCA ATCTTGAGATTGATG TERM 2832 2225751 - 2225786 + G 85 -7.7 -4.72272 | gap 2, overlap 2225738 2225752 CAGCGACAAAGAGTT G-CTTTAGG-GCGTGCA ATGG TGCGCGCACCTGAAGTC TTTTTAATGGACGAG TERM 2833 2225752 - 2225784 + G 91 -11.4 -3.98256 | gap 1, overlap 2225751 AGCGACAAAGAGTTG CTTTAGG-GCGTGCA ATGG TGCGCGCACCTGAAG TCTTTTTAATGGACG LVIS_2257 2225319 - 2226458 + | ABC-type sugar transport system, ATPase component TERM 2834 2226662 - 2226686 + T 100 -5.6 -5.89827 | opp_overlap 2226662 TTCGTCCGACAAAAA GAGCCCGGGA ATTGA TCCCTGACTC TTTTTTTTAATCGTT TERM 2835 2226686 - 2226662 - T 91 -7.8 -4.82901 | opp_overlap 2226662 TTCGTCCGACAAAAA GAGCCCGGGA ATTGA TCCCTGACTC TTTTTTTTAATCGTT LVIS_2258 2227666 - 2226701 - | Beta-galactosidase LVIS_2259 2229536 - 2227650 - | Beta-galactosidase TERM 2836 2229699 - 2229661 - R 100 -12.4 -4.96848 | opp_overlap 2229661 2229697 TTTTTTACACAAAAA CCAGTACGACCAACACAC TAT GTGTATGGGACGCACCGG TTTTGAATAACCGTT LVIS_2260 2230169 - 2229735 - | transcriptional regulator TERM 2837 2231229 - 2231273 + r 72 -8 -3.79995 | gap 1, opp_overlap 2231239 2231240, overlap 2231239 2231240 ATATCTATGTCACCA GTCAAAAAAAGCCCAGACGTG TTCG CACGTCTGGG-TCTTCTTAAC TTCTATTCTACTTAC TERM 2838 2231239 - 2231265 + r 100 -13.1 -3.7744 | gap 1, opp_overlap 2231239 2231240, overlap 2231229 2231240 CACCAGTCAAAAAAA G-CCCAGACGTG TTCG CACGTCTGGGTC TTCTTAACTTCTATT TERM 2839 2231264 - 2231239 - R 100 -13.3 -5.48825 | opp_overlap 2231239 2231229 2231240, overlap 2231240 CACCAGTCAAAAAAA GCCCAGACGTG TTCG CACGTCTGGGT CTTCTTAACTTCTAT TERM 2840 2231240 - 2231263 + r 100 -16.8 -3.45757 | opp_overlap 2231239 2231240, overlap 2231239 2231229 ACCAGTCAAAAAAAG CCCAGACGTG TTCG CACGTCTGGG TCTTCTTAACTTCTA TERM 2841 2231263 - 2231240 - R 100 -16.8 -3.8821 | opp_overlap 2231240 2231239 2231229, overlap 2231239 ACCAGTCAAAAAAAG CCCAGACGTG TTCG CACGTCTGGG TCTTCTTAACTTCTA TERM 2842 2231344 - 2231324 - R 73 -9.7 -2.92386 | overlap 2231321 2231319 CCAAAGTAAACATTA TGGTCGCGA CCG TCGCCACCA AACTAGACTGCCTAG LVIS_2262 2232589 - 2231321 - | hypothetical protein LVIS_2263 2233051 - 2232626 - | hypothetical protein LVIS_2264 2233453 - 2233085 - | hypothetical protein LVIS_2265 2234341 - 2233580 - | DNA-binding response regulator TERM 2843 2234419 - 2234407 - H 73 -2.7 -5.15634 | TATCCTATCAAAAAA GAATC GAC AATTC TATCCCCCTTATTCG TERM 2844 2234574 - 2234586 + H 81 -4.1 -5.30155 | CACCGCTACTCTACC GTAGT CAA ACTGC TTTTTTGGTTGATCG LVIS_2266 2234756 - 2235661 + | hypothetical protein TERM 2845 2235725 - 2235686 - T 100 -14.5 -5.00765 | opp_overlap 2235687, overlap 2235687 AATCAATTATAAAAA GCAGGCTTTCCAAGAGT TCAAAT ACTCTTGAAAAGCCTGT TTTCGTTATCTCTTA TERM 2846 2235724 - 2235687 - T 100 -18 -3.58832 | opp_overlap 2235687, overlap 2235686 ATCAATTATAAAAAG CAGGCTTTCCAAGAGT TCAAAT ACTCTTGAAAAGCCTG TTTTCGTTATCTCTT TERM 2847 2235687 - 2235724 + T 100 -15.8 -4.55544 | opp_overlap 2235686 2235687 ATCAATTATAAAAAG CAGGCTTTCCAAGAGT TCAAAT ACTCTTGAAAAGCCTG TTTTCGTTATCTCTT LVIS_2267 2239541 - 2235753 - | ATP-dependent exoDNAse (exonuclease V) beta subunit TERM 2848 2237832 - 2237851 + g 71 -2.8 -5.00616 | overlap 2237833 GTAAATCGGGGTCTG ATCGGCAA TTAA TTGCTGAA TTTTTTGGCCGACCA LVIS_2268 2243130 - 2239525 - | ATP-dependent nuclease, subunit B LVIS_2269 2243425 - 2244567 + | succinyl-diaminopimelate desuccinylase TERM 2849 2244655 - 2244624 - T 100 -23.2 -4.98255 | opp_overlap 2244624 GTCTAACGACAAAAA TCGTCAGCAGCCAC TTTG GTGGCTGCTGACGA TTTTTTATAATGCCT TERM 2850 2244624 - 2244655 + T 100 -23.2 -5.31877 | opp_overlap 2244624 GTCTAACGACAAAAA TCGTCAGCAGCCAC TTTG GTGGCTGCTGACGA TTTTTTATAATGCCT LVIS_2270 2245683 - 2244670 - | xylanase/chitin deacetylase TERM 2851 2245811 - 2245790 - R 100 -9.5 -5.55769 | opp_overlap 2245790 TTCGATAATAAAAAA GCACCTAAC CGTC GTTAAGTGC TTCCTAGTCATCGGT LVIS_2271 2246180 - 2245815 - | hypothetical protein LVIS_2272 2246856 - 2246257 - | saccharopine dehydrogenase related protein TERM 2852 2247419 - 2247396 - g 100 -10.2 -4.55295 | TCCCTGACAAACAAA CACCCAAGGC AGAA GCCGTGGGCG CCTTACAACGACTGC LVIS_2273 2246999 - 2247982 + | Aryl-alcohol dehydrogenase related enzyme TERM 2853 2248055 - 2248020 - f 89 -12.1 -3.31625 | opp_overlap 2248020, overlap 2248013 GAAACGAACGATCAA TAGCCGACACAAGC-TC ATTA GATGCTTG-GTCGGCTA TTTTTGACTTATCAG TERM 2854 2248020 - 2248055 + F 100 -12.1 -4.78149 | opp_overlap 2248020 2248013 GAAACGAACGATCAA TAGCCGACACAAGC-TC ATTA GATGCTTG-GTCGGCTA TTTTTGACTTATCAG LVIS_2274 2248263 - 2249573 + | xanthine/uracil/vitamin C permease TERM 2855 2249643 - 2249599 - T 90 -10.8 -4.0162 | gap 1, opp_overlap 2249599 2249642 TCTCGACACTACAAA CCACCGCACAATTGTTAGGCC AAAT GGC-TGATGATTGTGCGGTGG TTTTTGAGCCTGATT TERM 2856 2249599 - 2249643 + T 100 -17.4 -4.60889 | gap 1, opp_overlap 2249599, overlap 2249642 TCTCGACACTACAAA CCACCGCACAATTGTTAGGCC AAAT GGC-TGATGATTGTGCGGTGG TTTTTGAGCCTGATT LVIS_2275 2250675 - 2250145 - | transcriptional regulator TERM 2857 2250776 - 2250788 + H 72 -7.7 -3.75115 | opp_overlap 2250772, overlap 2250772 CTTATTATAATTTTG TCAGG TTA CCTGA TTAATTTTATGACAC LVIS_2276 2250821 - 2251756 + | ABC-type multidrug transport system, ATPase component LVIS_2277 2251771 - 2252547 + | ABC-type multidrug transport system, permease component TERM 2858 2252605 - 2252659 + T 80 -10.2 -3.41689 | opp_overlap 2252605 2252610 2252614, overlap 2252610 2252614 TAGGCTTAATTAAGA CAAAATAACCCGGGAAATAGCGATGA TAA TCACTGTCATTTCCCGGCTTATTTTA TTAGTGTCTATTTTG TERM 2859 2252659 - 2252605 - T 95 -12.4 -3.24329 | opp_overlap 2252605 2252610 2252614, overlap 2252610 2252614 TAGGCTTAATTAAGA CAAAATAACCCGGGAAATAGCGATGA TAA TCACTGTCATTTCCCGGCTTATTTTA TTAGTGTCTATTTTG TERM 2860 2252610 - 2252654 + T 100 -10.1 -4.77079 | opp_overlap 2252605 2252610 2252614, overlap 2252605 2252614 TTAATTAAGACAAAA TAACCCGGGAAATAGCGATGA TAA TCACTGTCATTTCCCGGCTTA TTTTATTAGTGTCTA TERM 2861 2252654 - 2252610 - T 100 -10.1 -4.73864 | opp_overlap 2252610 2252605 2252614, overlap 2252605 2252614 TTAATTAAGACAAAA TAACCCGGGAAATAGCGATGA TAA TCACTGTCATTTCCCGGCTTA TTTTATTAGTGTCTA TERM 2862 2252650 - 2252614 - T 81 -10.9 -3.25442 | opp_overlap 2252610 2252605 2252614, overlap 2252610 2252605 TTAAGACAAAATAAC CCGGGAAATAGCGATGA TAA TCACTGTCATTTCCCGG CTTATTTTATTAGTG TERM 2863 2252614 - 2252650 + T 81 -10.9 -3.26868 | opp_overlap 2252614 2252610 2252605, overlap 2252610 2252605 TTAAGACAAAATAAC CCGGGAAATAGCGATGA TAA TCACTGTCATTTCCCGG CTTATTTTATTAGTG LVIS_2278 2253619 - 2252705 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 2864 2252827 - 2252813 - G 71 -7 -3.96618 | CTGAATGGCAAAGAA CGGGCG CAT CCCCCG CCACATCACTGGCAG TERM 2865 2253364 - 2253380 + g 71 -7.3 -4.12456 | opp_overlap 2253358 CTGGCAAATGCAAGC GGCCAAT TGG ATTGGTC TTTTGCGCGTAGTCT TERM 2866 2253707 - 2253684 - R 100 -11 -5.25803 | AAGTGTCATAAAAAA GCGGGACC CACGACCT GGTCCCGC CAAAAATCATTGATT LVIS_2279 2256837 - 2253721 - | glycosyltransferase TERM 2867 2256175 - 2256137 - G 73 -2.3 -5.02074 | gap 1, overlap 2256122 2256138 2256139 GCAGCGGCCAAAAAA CGGGCCG-TGGCGACTAG CCAG CTAACCGCTAGCTGACCG CGCTCACGGCAACTA TERM 2868 2256975 - 2257020 + H 72 -6.2 -4.26903 | TACCCCCGGTGTCAA TGCTTCACGGTAGACAATAC CCGATT GTAATGTTTCCCGTGGAACA TTTTGCTAAAATCCC LVIS_2280 2257098 - 2257619 + | hypothetical protein LVIS_2281 2257790 - 2257960 + | hypothetical protein TERM 2869 2257989 - 2258014 + F 88 -9.8 -4.2349 | opp_overlap 2257989 2257988 CGCATACCAAAAGAT GGACTACTTC TTAATT GAGGTAGTCC TTTTGCATATACAAA LVIS_2282 2258017 - 2258205 + | hypothetical protein TERM 2870 2258308 - 2258276 - T 100 -10.8 -5.26918 | gap 1, opp_overlap 2258283 ATATTTCATAAAAAA GTAAGAACGTT-TCC TTTC GGACAACGTTCCTAC TACATAATCCTTTTA LVIS_2283 2259010 - 2258321 - | hypothetical protein TERM 2871 2259326 - 2259294 - R 86 -9.1 -4.34402 | opp_overlap 2259294 GGCTCTACACCAAAA GACCCGGCAGCCA CATCCCC TGGCCACCCGGTC TTCTTTCCAAACTAT TERM 2872 2259365 - 2259348 - R 86 -9.1 -4.26079 | CCAAACTATTTAAAA GGCTCCG CCAC CGGAACC GCCACCAAAGCCACC LVIS_2284 2261162 - 2259342 - | hypothetical protein TERM 2873 2261323 - 2261347 + r 70 -8 -3.63627 | gap 1, opp_overlap 2261323, overlap 2261326 2261327 ACTCCATTAACATAA TACTCACAGAG GAAG CTCTGTG-GTA TTTGCGCTCTAACCA TERM 2874 2261347 - 2261323 - R 70 -8 -3.71552 | gap 1, opp_overlap 2261323 2261326 2261327 ACTCCATTAACATAA TACTCACAGAG GAAG CTCTGTG-GTA TTTGCGCTCTAACCA TERM 2875 2261327 - 2261344 + r 71 -9.9 -2.63585 | opp_overlap 2261323, overlap 2261326 2261323 CATTAACATAATACT CACAGAG GAAG CTCTGTG GTATTTGCGCTCTAA TERM 2876 2261415 - 2261379 - R 100 -15.2 -3.60151 | opp_overlap 2261381, overlap 2261381 TCCCGCAAATGATAA TAGCCGCCATCGCG TTTCAACGT CGCGATGGCGGCTT TTTTAGTCATCAGTA TERM 2877 2261381 - 2261413 + r 100 -17.8 -5.1861 | opp_overlap 2261379 2261381 CCGCAAATGATAATA GCCGCCATCGCG TTTCAACGT CGCGATGGCGGC TTTTTTAGTCATCAG TERM 2878 2261413 - 2261381 - R 100 -17.8 -3.3771 | opp_overlap 2261381, overlap 2261379 CCGCAAATGATAATA GCCGCCATCGCG TTTCAACGT CGCGATGGCGGC TTTTTTAGTCATCAG TERM 2879 2261844 - 2261802 - R 100 -18 -5.20154 | opp_overlap 2261802 ACACAACGCAAAAAA GGCAAGAAGAAAATCCTCAA AAA TCGAGAACTTTCTTCCTGCC TTTCGGTGAAACTGA TERM 2880 2261802 - 2261844 + r 78 -9.2 -3.65351 | opp_overlap 2261802 ACACAACGCAAAAAA GGCAAGAAGAAAATCCTCAA AAA TCGAGAACTTTCTTCCTGCC TTTCGGTGAAACTGA LVIS_2285 2263524 - 2261902 - | Beta-xylosidase LVIS_2286 2265019 - 2263544 - | Na+/xyloside symporter related transporter TERM 2881 2265235 - 2265210 - R 100 -9.8 -5.33026 | opp_overlap 2265210 2265200 TAAGGCAAATAAAAA CCCCGAAAAA TCAACG TTTTCCGGGG TGATTGGTTGTTTTC LVIS_2287 2266165 - 2265260 - | AraC-type DNA-binding protein TERM 2882 2265287 - 2265301 + g 71 -2.8 -4.87291 | ACCACTTTCCTTAAC CGTC CGCACGC GACG TTTTTGCTTCAACTG TERM 2883 2266306 - 2266281 - R 100 -11.9 -5.36441 | opp_overlap 2266286 GCTGTACACAAAAAA GCAGACCACCT TACT AGGTCGTCTGC TAGAAATACTATAAA LVIS_2288 2267772 - 2266315 - | phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein TERM 2884 2267731 - 2267713 - G 81 -11 -3.65603 | AAAGACCGTCAAGAA GGCCAACG CCG CGTTGACC ACCACGATAATTTCG LVIS_2289 2267888 - 2268043 + | hypothetical protein TERM 2885 2268095 - 2268056 - T 100 -13.7 -3.33412 | opp_overlap 2268061, overlap 2268061 TAATCCCACATAACA GTAAACACCCCCGCTAC CTGAAC GTAACGGAGGTGTTTTC ATATCATGGTTTTAA TERM 2886 2268090 - 2268061 - T 100 -12.2 -3.99275 | opp_overlap 2268061, overlap 2268056 CCACATAACAGTAAA CACCCCCGCTAC CTGAAC GTAACGGAGGTG TTTTCATATCATGGT TERM 2887 2268061 - 2268090 + T 79 -7.8 -4.37502 | opp_overlap 2268061 2268056 CCACATAACAGTAAA CACCCCCGCTAC CTGAAC GTAACGGAGGTG TTTTCATATCATGGT LVIS_2290 2268934 - 2268107 - | DNA-entry nuclease TERM 2888 2268894 - 2268920 + g 87 -10.7 -4.11623 | opp_overlap 2268889, overlap 2268895 GCCGTATAGATGGAT ACGCGGCCGCC ACTGC GGCGACCGCGA TTTCGTTTACTCATG TERM 2889 2268895 - 2268919 + g 90 -14.2 -3.06251 | opp_overlap 2268889, overlap 2268894 CCGTATAGATGGATA CGCGGCCGCC ACTGC GGCGACCGCG ATTTCGTTTACTCAT LVIS_2291 2269176 - 2269715 + | hypothetical protein TERM 2890 2269766 - 2269799 + F 100 -12.6 -4.8048 | opp_overlap 2269766 TATGATTTCAGATAA CCACTCTATACCAA CAAATT TTGGTGTGGAGTGG TTTTTCATATGCCAA TERM 2891 2269799 - 2269766 - f 71 -8.2 -3.50869 | opp_overlap 2269766 TATGATTTCAGATAA CCACTCTATACCAA CAAATT TTGGTGTGGAGTGG TTTTTCATATGCCAA LVIS_2292 2269936 - 2270310 + | hypothetical protein TERM 2892 2270340 - 2270398 + T 100 -28.7 -3.75024 | opp_overlap 2270351, overlap 2270341 2270351 CCGAACCATCCCCAC TTTAACTCAAATACGCCCTGAATTAGC CTTAT GCCAATTCAGGGCGTATTTGAGTTAAG TTATTAATCCTGCCG TERM 2893 2270341 - 2270397 + T 100 -30 -2.84693 | opp_overlap 2270351, overlap 2270340 2270351 CGAACCATCCCCACT TTAACTCAAATACGCCCTGAATTAGC CTTAT GCCAATTCAGGGCGTATTTGAGTTAA GTTATTAATCCTGCC TERM 2894 2270351 - 2270387 + T 100 -18.2 -3.78811 | opp_overlap 2270351, overlap 2270341 2270340 CCACTTTAACTCAAA TACGCCCTGAATTAGC CTTAT GCCAATTCAGGGCGTA TTTGAGTTAAGTTAT TERM 2895 2270387 - 2270351 - T 100 -20.4 -3.76125 | opp_overlap 2270351 2270341 2270340 CCACTTTAACTCAAA TACGCCCTGAATTAGC CTTAT GCCAATTCAGGGCGTA TTTGAGTTAAGTTAT LVIS_2293 2271604 - 2270402 - | hypothetical protein LVIS_2294 2271801 - 2272106 + | transposase, fragment TERM 2896 2272112 - 2272137 + T 100 -9 -4.64334 | opp_overlap 2272111, overlap 2272113 TAATCACTAAATGAC GCCCCTCGTT GATTCA AACGAGGGGA TTTTCTTAGCGAATT TERM 2897 2272113 - 2272136 + T 95 -12.5 -3.37877 | opp_overlap 2272111, overlap 2272112 AATCACTAAATGACG CCCCTCGTT GATTCA AACGAGGGG ATTTTCTTAGCGAAT TERM 2898 2272490 - 2272512 + T 100 -10.5 -5.49568 | ACCAAGTTGGTCATT GCCGCCCCT TAACC ACGGGCGGC TTTTTCTTTTACATT TERM 2899 2272623 - 2272583 - T 100 -17.1 -5.18357 | opp_overlap 2272583 TAATCGATCAAAAAA GCACCTCATTGACCAATCT ACT AGATTAGCTAATGAGGTGC TTTTTAACTCCAATT TERM 2900 2272583 - 2272623 + T 100 -14.9 -4.67011 | opp_overlap 2272583 TAATCGATCAAAAAA GCACCTCATTGACCAATCT ACT AGATTAGCTAATGAGGTGC TTTTTAACTCCAATT LVIS_2295 2273299 - 2272655 - | phosphatase TERM 2901 2273456 - 2273435 - R 100 -10.1 -4.49756 | opp_overlap 2273435 TGTGAAACATTAAAA GCCCAAGAC AAAA GTCCCGGGC TCATCTGTATCACTG LVIS_2296 2274843 - 2273512 - | cysteine aminopeptidase TERM 2902 2275020 - 2274995 - R 77 -6.2 -4.67353 | TGACGTAGCTAAAAA GACTGAATGA ATCCGA TCACCCAGTC TTTGTTATTAATAAC LVIS_2297 2275510 - 2275046 - | transcriptional regulator TERM 2903 2275203 - 2275213 + g 83 -2.4 -5.60993 | ACAATTTCCGGATAA AGGG CTT CCCC TTTTTTTGTCAGCGA TERM 2904 2275622 - 2275654 + r 72 -6.1 -4.29845 | opp_overlap 2275625, overlap 2275623 2275625 2275651 TTCTAATCAATACAA AAACGCCGCCGCACA TTG TGTGCAGCGACGTCA TTTTGACTTGAATTA TERM 2905 2275623 - 2275653 + r 72 -9.6 -3.17184 | opp_overlap 2275625, overlap 2275622 2275625 2275651 TCTAATCAATACAAA AACGCCGCCGCACA TTG TGTGCAGCGACGTC ATTTTGACTTGAATT TERM 2906 2275625 - 2275651 + r 86 -12.2 -3.13906 | opp_overlap 2275625, overlap 2275623 2275622 TAATCAATACAAAAA CGCCGCCGCACA TTG TGTGCAGCGACG TCATTTTGACTTGAA TERM 2907 2275651 - 2275625 - R 100 -16.6 -5.1485 | opp_overlap 2275625 2275623 2275622 TAATCAATACAAAAA CGCCGCCGCACA TTG TGTGCAGCGACG TCATTTTGACTTGAA LVIS_2298 2276254 - 2275667 - | Signal peptidase I TERM 2908 2276476 - 2276516 + H 75 -10.5 -2.79718 | overlap 2276475 2276474 GGAAGAATACGTTTA TGCTAGGCCGTCATTTCGT TGC GTGAAATGGCGGTCTAACG GTATTTTAGCCATTA TERM 2909 2277020 - 2277034 + G 73 -7.8 -3.9712 | TTCCCCATTATCGCG CCCATC ATC GGTGGG TTTATGATCCAATAC TERM 2910 2277161 - 2277149 - g 100 -9.1 -4.84359 | opp_overlap 2277148 2277147 TTACCCCCAGAAAAA CGCCA AAC TGGCG GCTTTCATACATCTC TERM 2911 2277592 - 2277572 - g 82 -12.5 -3.19642 | opp_overlap 2277579 2277579, overlap 2277583 ATCATCATGGATCAA GCCACCAGC AAT GCCGGCGGC GCCTCCGCGGTCATT LVIS_2299 2276498 - 2277754 + | major facilitator superfamily permease TERM 2912 2277814 - 2277758 - T 100 -18.2 -3.98236 | opp_overlap 2277767, overlap 2277767 AAAGCCCAGTAGAAA CCTGACAAATACGCTACGCGAGAATC GGCAA GATTCTCGCGTAGCGTATTTTATTGG TGTCGTGTCGTCATT TERM 2913 2277805 - 2277767 - T 100 -24.9 -3.96291 | opp_overlap 2277767, overlap 2277758 TAGAAACCTGACAAA TACGCTACGCGAGAATC GGCAA GATTCTCGCGTAGCGTA TTTTATTGGTGTCGT TERM 2914 2277767 - 2277805 + T 100 -24.9 -4.76075 | opp_overlap 2277767 2277758 TAGAAACCTGACAAA TACGCTACGCGAGAATC GGCAA GATTCTCGCGTAGCGTA TTTTATTGGTGTCGT LVIS_2300 2279043 - 2277835 - | NRPS condensation (elongation) domain-containing protein TERM 2915 2277863 - 2277874 + g 77 -4.4 -5.15117 | CTCCACTGCGTCAAT TGTG CGAC CACA TTTTTTAAAATTTTA TERM 2916 2277963 - 2277932 - G 73 -7.4 -4.1964 | gap 1 CCCAATATTCGAAAA GCCAGCGTCCATGCA TCG TG-ATAGACGCTAAC GGTCATTTGAAAGTG LVIS_2301 2279221 - 2279745 + | Acyl-CoA hydrolase TERM 2917 2279785 - 2279755 - T 91 -8.3 -4.70626 | opp_overlap 2279756, overlap 2279746 2279756 GAATAACGCCAAAAA GCGAGTCTGGG GGTAAAATG CCCAGACTCGT TTTATATTTTCGACT TERM 2918 2279756 - 2279784 + T 100 -13.9 -4.89567 | opp_overlap 2279746 2279755 2279756 AATAACGCCAAAAAG CGAGTCTGGGGGT AAA ATGCCCAGACTCG TTTTATATTTTCGAC TERM 2919 2279784 - 2279756 - T 91 -11.8 -3.41291 | opp_overlap 2279756, overlap 2279746 2279755 AATAACGCCAAAAAG CGAGTCTGGG GGTAAAATG CCCAGACTCG TTTTATATTTTCGAC LVIS_2302 2280403 - 2279870 - | acetyltransferase LVIS_2303 2280524 - 2281171 + | putative NADH-flavin reductase TERM 2920 2281185 - 2281208 + F 90 -7.3 -5.23316 | AACGTGATTTTCTGA CGTCGACCG TATCAT CGGCCGGCG TTTTTTGGTATGCTA LVIS_2304 2281254 - 2282603 + | branched-chain amino acid permease LVIS_2305 2282690 - 2282953 + | hypothetical protein TERM 2921 2282990 - 2282963 - f 91 -8.3 -4.60487 | opp_overlap 2282964, overlap 2282964 CATTAGTTCGAAAAA GGACCCGGTCG TTAATG CGGCCGGGTCT TTTTTTGACGCGTTT TERM 2922 2282964 - 2282989 + F 100 -14.7 -5.41746 | opp_overlap 2282963 2282964 ATTAGTTCGAAAAAG GACCCGGTCGT TAAT GCGGCCGGGTC TTTTTTTGACGCGTT TERM 2923 2282989 - 2282964 - f 89 -11.8 -3.3581 | opp_overlap 2282964, overlap 2282963 ATTAGTTCGAAAAAG GACCCGGTCG TTAATG CGGCCGGGTC TTTTTTTGACGCGTT TERM 2924 2283225 - 2283210 - g 73 -10.4 -3.17797 | TGGACACAGATTGAA CACGGG GCTG CCCGTG AACCCCTGCTAGCTA LVIS_2306 2283045 - 2283728 + | HAD superfamily hydrolase LVIS_2307 2283961 - 2283725 - | hypothetical protein TERM 2925 2284019 - 2283987 - R 100 -9.1 -4.93365 | opp_overlap 2283988, overlap 2283988 CTCTAGAATTAAAAA GCCCGCTAACGCTGC TAA ACAGCCTTAACGGGT TTTTGATTGGTTAAT TERM 2926 2284018 - 2283988 - R 100 -12.6 -3.55296 | opp_overlap 2283988, overlap 2283987 TCTAGAATTAAAAAG CCCGCTAACGCTGC TAA ACAGCCTTAACGGG TTTTTGATTGGTTAA TERM 2927 2283988 - 2284018 + r 100 -9.7 -4.93547 | opp_overlap 2283988 2283987 TCTAGAATTAAAAAG CCCGCTAACGCTG CTAAA CAGCCTTAACGGG TTTTTGATTGGTTAA LVIS_2308 2284419 - 2284030 - | hypothetical protein TERM 2928 2284460 - 2284442 - R 100 -14.6 -3.17075 | opp_overlap 2284446 CGCCCCTTAACTCAA CCGACCAC CAG GTGGTCGG TTGCCCCCTAAATTA TERM 2929 2284714 - 2284685 - R 79 -11.1 -3.05816 | opp_overlap 2284688 2284692 2284712, overlap 2284692 2284712 TCATCCTTGATTCAA TTATTAATCATTA AATT TAATGATTAATAA AAGGGTCCGGAACAA TERM 2930 2284747 - 2284712 - R 100 -23.6 -3.29385 | opp_overlap 2284712 2284717, overlap 2284685 2284717 AAATTTAATGATTAA TAAAAGGGTCCGGAAC AAAA GTTCCGGACCCTTTTA TGTCTCTAACTATCT TERM 2931 2284712 - 2284747 + r 100 -23.6 -3.0218 | opp_overlap 2284685 2284712 2284717, overlap 2284717 AAATTTAATGATTAA TAAAAGGGTCCGGAAC AAAA GTTCCGGACCCTTTTA TGTCTCTAACTATCT TERM 2932 2284742 - 2284717 - R 100 -19.1 -4.75219 | opp_overlap 2284712 2284717, overlap 2284712 TAATGATTAATAAAA GGGTCCGGAAC AAAA GTTCCGGACCC TTTTATGTCTCTAAC TERM 2933 2284717 - 2284742 + r 100 -19.1 -4.64844 | opp_overlap 2284717 2284712, overlap 2284712 TAATGATTAATAAAA GGGTCCGGAAC AAAA GTTCCGGACCC TTTTATGTCTCTAAC LVIS_2309 2286729 - 2284819 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA trmE 2288200 - 2286806 - | tRNA modification GTPase TrmE TERM 2934 2286939 - 2286922 - G 72 -10.5 -2.95539 | overlap 2286921 CAATTTGAACCAAAT CGACCGG CATC CCGGCCG CAATCCCATTTTGCA TERM 2935 2288333 - 2288292 - R 100 -5.1 -5.94713 | gap 1 ATGCCATAAAAAAAA GCACCTACTCCACGCCACCT AAC AAG-GGCGCGGATAAAGTAC TTTCACTACTTTATC LVIS_2311 2289176 - 2288412 - | RNA-binding protein TERM 2936 2289343 - 2289322 - R 100 -13.7 -5.30616 | opp_overlap 2289341 TTAGCCAAAGAAAAA CGCGCTAGC CTGC GCCAGCGCG TTAAAATGCATTTAT LVIS_2312 2290199 - 2289366 - | preprotein translocase subunit YidC TERM 2937 2289411 - 2289429 + g 75 -5.2 -4.72729 | AATTGCTTTCTTAAC GGTACGGT CAT GCTGTGCC TTTTCCTTTTCCTTC TERM 2938 2290180 - 2290191 + g 71 -4.4 -4.7339 | CCCAGCATAAGTAGG GTAC GTTT GTAC TTTTTCACGTTTATT rnpA 2290558 - 2290202 - | ribonuclease P TERM 2939 2290661 - 2290640 - R 100 -8.7 -5.58522 | CAGATAAAATAAAAA GACCACTGA ACCA TCAGCGGCC TATGCAGACAATACT LVIS_2314 2290795 - 2290661 - | ribosomal protein L34 SEQUENCE gi|116334867|ref|NC_008498.1| Lactobacillus brevis ATCC 367 plasmid 1, complete sequence (length 13413) LVIS_A01 1281 - 352 - | hypothetical protein LVIS_A02 2449 - 1613 - | hypothetical protein TERM 1 2684 - 2655 - R 78 -9.4 -3.72576 | TGCTTCGGGATCAAA GCATGACCGT TCATCACACC ACGGTCATGC GATGGGTCCATCACT TERM 2 2685 - 2710 + r 93 -11.9 -3.58533 | ACACCACGGTCATGC GATGGGTCCAT CACT ATGGCCCCATC TTTAAAGCGTTGTGG LVIS_A03 3307 - 3023 - | DNA-damage-inducible protein J TERM 3 3350 - 3324 - H 77 -10.3 -3.07043 | gap 1, overlap 3327 CTCATCACCTCAACA GTATTGTACGCC AGAT GGCGTACAA-AC GCAATTGGACTAAAC TERM 4 3348 - 3327 - H 91 -13.1 -2.75252 | overlap 3324 ATCACCTCAACAGTA TTGTACGCC AGAT GGCGTACAA ACGCAATTGGACTAA TERM 5 4839 - 4851 + G 70 -7.7 -3.84406 | opp_overlap 4849 GTACTAAAACTGCCG TGGCT AAA AGCCA TTCTTATGGTACCGG LVIS_A04 3440 - 5071 + | Type IV secretory pathway, VirD4 component LVIS_A05 5144 - 5467 + | plasmid maintenance system killer protein LVIS_A06 5481 - 5816 + | XRE family transcriptional regulator TERM 6 5875 - 5902 + F 100 -15.8 -5.14965 | opp_overlap 5871 5875 TGAATTAGTAATTTA GCAGTGATTGTT TAAA AACAATCACTGC TTTTTTGATCAAGCT TERM 7 5902 - 5875 - f 100 -15.8 -2.58767 | opp_overlap 5875, overlap 5871 TGAATTAGTAATTTA GCAGTGATTGTT TAAA AACAATCACTGC TTTTTTGATCAAGCT TERM 8 5993 - 6019 + F 75 -3 -5.16237 | gap 1, opp_overlap 5993, overlap 5994 CATGATGCAAAATCA TTCGGCCA-AC CGCCCT GTCTGGCCGAC TTTTTTACTCAAATT TERM 9 6264 - 6248 - f 79 -10.9 -3.15861 | TATCATTGGGAGGAA TTCAGCC TAC GGCTGAA CCGACTTTTGATATC TERM 10 6306 - 6288 - f 75 -8.8 -3.64487 | TGATATCTCGAATAA CTTTGCCC GCA GGGCAACG GAGGTGGGATTTGTG TERM 11 7030 - 7020 - g 73 -5.4 -4.60924 | overlap 7009 GAAACCGGGCAAAAA TTGC ATG GCAA TTGGCATCAATACCG LVIS_A07 6654 - 7823 + | relaxase/mobilization nuclease domain-containing protein TERM 12 8205 - 8222 + T 75 -3.3 -5.18726 | opp_overlap 8205 GGATTAGTAGTACAA CCAACTG TTGT CGGCTGG TTTTTCTTCTCCGGG LVIS_A09 9302 - 8193 - | hypothetical protein TERM 13 8541 - 8521 - G 71 -3.9 -4.72272 | opp_overlap 8525 GTTCGGCACCAAAAA CTAAGCAGT TGG ACGGCTTTG GGTTCTAAGAAGACG TERM 14 8603 - 8613 + g 73 -3.2 -4.91987 | CATTGGCATGTTTAA CCAG ATC TTGG TTTTGTTGTTCAATT TERM 15 8727 - 8739 + g 78 -7.7 -4.3208 | TTTATATAGATTGTG TCCGA TTT TCGGA TTTTCGCTTGTAGCA TERM 16 8786 - 8812 + g 82 -11.6 -3.2964 | overlap 8793 8810 CGTCAACGAACTTTC GCGAACGTCCGA TTT TCGGATTTTCGC TTGTAGCAAGGGTTT TERM 17 8793 - 8805 + g 78 -7.7 -4.3208 | overlap 8786 GAACTTTCGCGAACG TCCGA TTT TCGGA TTTTCGCTTGTAGCA TERM 18 8840 - 8866 + g 82 -11.6 -3.2964 | overlap 8847 8864 TTTCAACGGTCTCCT GCGAACGTCCGA TTT TCGGATTTTCGC TTGTAGCAAGGGTTT TERM 19 8847 - 8859 + g 78 -7.7 -4.3208 | overlap 8840 GGTCTCCTGCGAACG TCCGA TTT TCGGA TTTTCGCTTGTAGCA TERM 20 9465 - 9481 + H 100 -8 -5.92399 | GGATTCTCTTTCTTG GTTGCC CATTC GGCAAC TTTTTTATTTTATTC TERM 21 9546 - 9514 - H 100 -9.2 -5.54338 | opp_overlap 9514 CAATCAAAATAAAAA TGGACTAGGCAGCC TTGCT AGCTACTTAGTCCA TTGAATTTAATTTGT TERM 22 9670 - 9631 - H 71 -9.5 -3.02936 | overlap 9630 CAAATTAAGAACAAT TTTCAGTCGATTTTAAC TTGGCG GTGAAAATCGACTGAAT CTAAGTAGCTGTCTG TERM 23 9696 - 9754 + H 100 -13.5 -3.14801 | overlap 9697 9705 9718 GTCTGGTAGCTACTT TCTAATAAGCGGAAAAGATCTTGATCC CTGGT GGGTTGGGATCTTTTTCGTTTATTAGC CTGTTTTTTATCCAG TERM 24 9705 - 9745 + H 91 -10.6 -4.21351 | overlap 9696 9697 9718 CTACTTTCTAATAAG CGGAAAAGATCTTGATCC CTGGT GGGTTGGGATCTTTTTCG TTTATTAGCCTGTTT TERM 25 9718 - 9738 + H 78 -4 -5.09521 | overlap 9705 9696 9697 AGCGGAAAAGATCTT GATCCC TGGTGGGTT GGGATC TTTTTCGTTTATTAG TERM 26 10549 - 10536 - g 79 -2.4 -5.38839 | TACATAAAAATAAAA CCAA TAAGAG TTGG TGGCATTTTTGGTAA LVIS_A10 9977 - 10564 + | hypothetical protein LVIS_A11 11198 - 11962 + | XRE family transcriptional regulator TERM 27 12022 - 12058 + F 70 -9.5 -2.8733 | opp_overlap 12027 12029, overlap 12027 TCAAATAACGCCTAT AAAAAGGGCAAGCAGAG AAT CATTGCTTGCTCTTTTC GTGTTTTATAGGCAC TERM 28 12027 - 12053 + F 100 -9.4 -4.58236 | opp_overlap 12027 12029, overlap 12022 TAACGCCTATAAAAA GGGCAAGCAGAG AAT CATTGCTTGCTC TTTTCGTGTTTTATA TERM 29 12053 - 12027 - f 74 -5 -4.8543 | opp_overlap 12027 12022, overlap 12029 TAACGCCTATAAAAA GGGCAAGCAGAG AAT CATTGCTTGCTC TTTTCGTGTTTTATA LVIS_A12 12101 - 12706 + | XRE family transcriptional regulator SEQUENCE gi|116334879|ref|NC_008499.1| Lactobacillus brevis ATCC 367 plasmid 2, complete sequence (length 35595) LVIS_B01 693 - 481 - | hypothetical protein TERM 1 547 - 563 + g 74 -6.6 -4.34402 | opp_overlap 540 547 AATATAAGTGTATAA GGAATC ATACA GATTCC TTTTGATCTCGCCAG TERM 2 1028 - 1014 - H 89 -11.4 -3.41795 | AAACCTGTATTAGAA GTCGCC GTT GGCGAC AACAAAGTCAAACTC LVIS_B02 1072 - 3132 + | hypothetical protein TERM 3 4197 - 4177 - T 79 -8.4 -4.0825 | GGGTTAACCAAACAA TTAGGCTT ACAAG AAGCCTAA AAAGAGCCTGAGCAT TERM 4 4505 - 4480 - T 100 -8.3 -5.04597 | overlap 4499 ATGGAGACAGAAAAA GGAAGCCCTGC GCTA ACAAGACTTCC CATGCAAGCCGCTTC TERM 5 5757 - 5727 - T 74 -7.7 -3.91084 | gap 1 TGATTGGTAATTAAA GTCGCT-AATGCTG CCGT CAGCATCGAACGAC GACCGCAATTCCGCC TERM 6 5851 - 5874 + T 100 -13.2 -3.40639 | gap 1 AGCTAATCGTAGCTT TGGC-GACGCC TAA GGCGTCAGCCA TTACTTGGTAAGATT LVIS_B05 7165 - 6212 - | hypothetical protein LVIS_B06 7692 - 7916 + | hypothetical protein TERM 7 8088 - 8061 - f 100 -9.8 -5.06735 | opp_overlap 8062, overlap 8062 TAGAAAGTAGAAAAA CGGCCACTAGGG TATA CCCTATTGGCCT TTTTTGCTTCTGTGC TERM 8 8062 - 8087 + F 100 -13.3 -5.35354 | opp_overlap 8061 8062 AGAAAGTAGAAAAAC GGCCACTAGGG TATA CCCTATTGGCC TTTTTTGCTTCTGTG TERM 9 8087 - 8062 - f 100 -13.3 -3.62414 | opp_overlap 8062, overlap 8061 AGAAAGTAGAAAAAC GGCCACTAGGG TATA CCCTATTGGCC TTTTTTGCTTCTGTG LVIS_B07 8156 - 8740 + | site-specific recombinase, DNA invertase Pin related protein TERM 10 8871 - 8885 + F 82 -5 -5.27477 | AATCAAAAATGATTA CCTTAA AAA TTGAGG TTTTTTAATTAAAAT LVIS_B08 9100 - 10305 + | NAD(FAD)-dependent dehydrogenase TERM 11 10386 - 10364 - f 74 -4.9 -4.78237 | gap 1, overlap 10366 TACTTTAGAACAAAA TG-GCCATCA TTAA CGATGGCTCA GTAGCAAATAAAAAC TERM 12 10476 - 10510 + F 74 -4.3 -4.91852 | overlap 10477 ATTATTATGCCGCTA AGGTATGTTCTCG ATACTCACA CGGGGACATACCC TTTATTTTTGATGAG TERM 13 10909 - 10921 + F 70 -7.7 -3.70863 | opp_overlap 10898 ATAAGCTCATCGTGG TTCGC TAA GCGAA TTTGCGTAATATCTG TERM 14 11915 - 11870 - f 100 -13.6 -5.2189 | opp_overlap 11870 11894 11912, overlap 11908 11912 TTAACCATGAAAAAA GTACCTCACAATCGTTAGAC TTCTTT GTCTAACAATTATGAAGCAC TTCACTAAAGGGCAT TERM 15 12041 - 12016 - f 71 -4 -4.80959 | TAAGGCATAAGAAAA GCCCCTAC AAGACCAAGA GTAAGGGC CAACTAATCATACAT TERM 16 12350 - 12326 - f 90 -4.2 -5.59655 | opp_overlap 12326, overlap 12327 GAAAGTAATAAAAAA GCCCTTACCC ATGGG GGATAGGGAC TCCTTCAATCAATCA TERM 17 12788 - 12811 + F 73 -3.8 -4.96388 | overlap 12783 TTGATCACTGAAAAA CCAAGGAGAC TTCC GTTTCTTCGG TTTTCTTTCCTCATT TERM 18 12978 - 12955 - f 71 -9.6 -3.04144 | GCGCTATTTGGAACA TTGATGGGCC TTTA GGTCCATCAA ACCGTCTTTAGCCAC TERM 19 13136 - 13124 - f 79 -7.7 -4.29139 | opp_overlap 13123 TTAAATCTAAAATAA TAGCC AAC GGCTA ATGTGATGATATCTC LVIS_B09 13454 - 14830 + | NAD(FAD)-dependent dehydrogenase TERM 20 14914 - 14953 + T 100 -22.4 -4.371 | opp_overlap 14914, overlap 14916 AGTCTCCACAAATAA GACGGTCTAGTGAGAATC TTCG GATTCTCACTAGACCGCC TTTTGATATAATGGA TERM 21 14953 - 14914 - T 100 -24.6 -4.06687 | opp_overlap 14914 14916 AGTCTCCACAAATAA GACGGTCTAGTGAGAATC TTCG GATTCTCACTAGACCGCC TTTTGATATAATGGA TERM 22 14916 - 14951 + T 100 -23.6 -2.52585 | opp_overlap 14914, overlap 14914 TCTCCACAAATAAGA CGGTCTAGTGAGAATC TTCG GATTCTCACTAGACCG CCTTTTGATATAATG TERM 23 15000 - 14979 - T 100 -8 -5.80951 | ATGGAAAATAAAAAA GGCATCGG TCACAC CCGATACC CACAGATTATCCCCG LVIS_B10 16427 - 15588 - | IS30 family transposase TERM 24 16309 - 16279 - G 70 -7.7 -3.91084 | gap 1 TGATTGGTAATTAAA GTCGCT-AATGCTG CCGT CAGCATCGAACGAC GACCGCAATTCCGCC TERM 25 16403 - 16426 + g 91 -13.2 -3.40639 | gap 1 AGCTAATCGTAGCTT TGGC-GACGCC TAA GGCGTCAGCCA TTACTTGGTAAGATT LVIS_B11 17577 - 16573 - | oxyanion-translocating ATPase TERM 26 16922 - 16938 + g 71 -4.4 -4.83169 | TGTGCTGCTCGTGCT GCTTCA AGTAA TGAGGC TTTTTGTGGCCGCGT TERM 27 17644 - 17626 - R 88 -9.6 -4.3487 | opp_overlap 17626, overlap 17630 ATATATAATTCAAAA GAAATGGC CGC GCCATCTC TTACCTTTAGTAAAA TERM 28 17640 - 17630 - R 79 -6.8 -4.73092 | opp_overlap 17626, overlap 17626 ATAATTCAAAAGAAA TGGC CGC GCCA TCTCTTACCTTTAGT LVIS_B12 18023 - 17661 - | hypothetical protein TERM 29 19901 - 19886 - H 89 -3.9 -5.64421 | ACGGCAAACAAAAAA GCCCG TTTTAT CAGGC TTTTGGCTACTTAAA TERM 30 20017 - 20029 + H 74 -7.7 -3.92542 | TTATTTTCTGTTTTC TGCGA TTG TCGCA TTGTTTCCACCTCCA TERM 31 20323 - 20335 + H 72 -7.7 -3.8377 | TAGCCACTTCTTGTT CATCG ATT CGATG TTTCGTCTAGGACTT TERM 32 20633 - 20609 - g 75 -5.1 -4.75372 | ACCACTGATCAAAAA TTAGCAAATCA AAT TGAGTTACTAA AATTGGCAGGAGCAG LVIS_B13 20567 - 21148 + | site-specific recombinase, DNA invertase Pin related protein TERM 33 21279 - 21254 - T 82 -8.4 -4.40358 | opp_overlap 21254 21256 ACTGATTTCAGAAAA GCCCTCTATT CCGCAT AATAGAGGAC TTTTTTGTGTGCATT TERM 34 21254 - 21279 + T 89 -6.2 -5.38951 | opp_overlap 21254, overlap 21256 ACTGATTTCAGAAAA GCCCTCTATT CCGCAT AATAGAGGAC TTTTTTGTGTGCATT TERM 35 21354 - 21365 + T 88 -3 -5.80003 | GTTGTCTGAGAGCGC GTAA TTAT TTAC TTTTTTCTTTGTTAG TERM 36 21476 - 21527 + T 77 -4.6 -4.91712 | gap 1, opp_overlap 21485, overlap 21478 21489 21491 21493 CAAGATACAAGTTAC TAGATA-CAAGTTACAGATTACAAG TTA CTTGTAATCTGTATCTGGGTGACTC TTTTTATAGCTTCGA TERM 37 21478 - 21525 + T 73 -7.2 -4.07789 | gap 1, opp_overlap 21485, overlap 21476 21489 21491 21493 AGATACAAGTTACTA GATA-CAAGTTACAGATTACAAG TTA CTTGTAATCTGTATCTGGGTGAC TCTTTTTATAGCTTC TERM 38 21517 - 21485 - T 100 -15.1 -3.6217 | opp_overlap 21478 21476 21489 21491 21493 AGTTACTAGATACAA GTTACAGATTACAAG TTA CTTGTAATCTGTATC TGGGTGACTCTTTTT TERM 39 21489 - 21513 + T 100 -14.5 -2.92091 | opp_overlap 21485, overlap 21478 21476 21491 21493 ACTAGATACAAGTTA CAGATTACAAG TTA CTTGTAATCTG TATCTGGGTGACTCT TERM 40 21491 - 21511 + T 83 -11.3 -3.01119 | opp_overlap 21485, overlap 21489 21478 21476 21493 TAGATACAAGTTACA GATTACAAG TTA CTTGTAATC TGTATCTGGGTGACT LVIS_B14 21739 - 21500 - | hypothetical protein LVIS_B15 22528 - 21743 - | chromosome partitioning ATPase TERM 41 22201 - 22212 + g 70 -2.2 -4.83722 | AAGTTTTTAAAAATA GTGG TCGG TCAC TTTTCTTATAATCTT TERM 42 22759 - 22734 - H 100 -9.7 -5.84432 | TAGAACATAAAAAAA CACCCACCGAC GGGA ATCGGTGAGCG CCACATAAAAGTCAT TERM 43 23027 - 23040 + H 85 -5.9 -5.18357 | opp_overlap 23027 AATACGTATTACCAA CGCCT GCTA GGGCG TTTTTTAGTAGGTTA LVIS_B16 23787 - 24245 + | hypothetical protein TERM 44 24304 - 24359 + T 100 -13.6 -4.08557 | gap 1, opp_overlap 24316 GGAGGACCTTTTTAA TGGGTCTAGAATTTTTGGTGTTGGAAA GTA TTTCCATT-CCAAAAGTACTAGGCCCA TTATTGTTTCAGCAA TERM 45 25963 - 25910 - T 100 -12.7 -4.72272 | gap 1, opp_overlap 25921 TTTTGTTATCAAAAA GGGCCTAGTACTTTTGG-AATGGAAA TAC TTTCCAACACCAAAAATTCTAGACCC AAAACAATCCTGAAA LVIS_B18 26272 - 25994 - | hypothetical protein TERM 46 26703 - 26726 + r 100 -12.6 -4.1891 | opp_overlap 26706, overlap 26694 26706 TGTCAAGGGCATATT TAATCCCCAT TTTG ATGGGGATTA TTTGTATTAGAAGGC TERM 47 26706 - 26723 + r 88 -9.9 -4.21773 | opp_overlap 26706, overlap 26694 26703 CAAGGGCATATTTAA TCCCCAT TTTG ATGGGGA TTATTTGTATTAGAA TERM 48 26723 - 26706 - R 74 -9.9 -3.13475 | opp_overlap 26694 26706 26703 CAAGGGCATATTTAA TCCCCAT TTTG ATGGGGA TTATTTGTATTAGAA TERM 49 27047 - 27057 + r 70 -5.4 -4.52857 | TTTCAAGTTGAGCTT GTTG CTG CAAC TTTTGTGTAAAGGCT LVIS_B19 27740 - 27153 - | integrase LVIS_B20 27819 - 28100 + | antitoxin of toxin-antitoxin stability system LVIS_B21 28097 - 28453 + | hypothetical protein TERM 50 28520 - 28484 - T 100 -19.1 -4.77698 | opp_overlap 28473 28484 28487 TAATATGAAAATAAA TAACCCCTAATATCTAC ATT ATAGATATTAGGGGTTA TTCTTTCAATGTTTT TERM 51 28484 - 28520 + T 100 -18.4 -4.03611 | opp_overlap 28484, overlap 28473 28487 TAATATGAAAATAAA TAACCCCTAATATCTA CATTA TAGATATTAGGGGTTA TTCTTTCAATGTTTT TERM 52 28487 - 28517 + T 100 -15.7 -4.11346 | opp_overlap 28484, overlap 28484 28473 TATGAAAATAAATAA CCCCTAATATCTA CATTA TAGATATTAGGGG TTATTCTTTCAATGT LVIS_B22 29434 - 28724 - | hypothetical protein LVIS_B23 33876 - 29434 - | superfamily II DNA/RNA helicase TERM 53 29978 - 29958 - G 71 -3.9 -4.79223 | opp_overlap 29960 29962, overlap 29960 GGAGACTATCAAAAA TATTCGACG CTA CGTCGTATT TATGACCAACACTAA TERM 54 29962 - 29974 + g 71 -9.1 -3.51934 | opp_overlap 29960 29958, overlap 29960 ACTATCAAAAATATT CGACG CTA CGTCG TATTTATGACCAACA TERM 55 33910 - 33938 + r 74 -6.1 -4.4874 | opp_overlap 33929 TAACTTTTTAGGTTA GTACTACAAGTTT TTA AAATTAGTGGTAC TTTTAGATTTTTACC TERM 56 33950 - 33979 + r 82 -10.2 -3.68662 | opp_overlap 33929 33959 33961, overlap 33952 GTACTTTTAGATTTT TACCAAAAATGC CACCAA GCATTTTTGGTG TTTGAAGTATTATCT TERM 57 33952 - 33977 + r 80 -10.6 -3.41704 | opp_overlap 33929 33959 33961, overlap 33950 ACTTTTAGATTTTTA CCAAAAATGC CACCAA GCATTTTTGG TGTTTGAAGTATTAT LVIS_B24 34428 - 33949 - | hypothetical protein LVIS_B25 35356 - 34421 - | plasmid replication initiation protein