TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.578686 %AT, 1590423 nt, 11023 terms. Intergenic: 0.634611 %AT, H2T: 219353 nt, 1937 terms; T2T: 49691 nt, 1236 terms; H2H: 49859 nt, 764 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|81427616|ref|NC_007576.1| Lactobacillus sakei subsp. sakei 23K, complete genome (length 1884661) TERM 1 727 - 689 - g 93 -13.4 -2.76404 | opp_overlap 703, overlap 699 703 TTTAGGTAAAACCCA TTTGATGCAAGCAATTGG TCA CCAATTACTCGAATCAAA ACCCGAAACGAACGT dnaA 210 - 1556 + | chromosomal replication initiation protein A TERM 2 2055 - 2007 - g 74 -10.6 -2.58358 | overlap 2006 2004 2009 2011 AAATTACCAGAAGAT CAGATGCGAATTGCAG-TTGGAAA TAA TTTCCAAACAACAATTCGC-TCCG GTAAATCAGAATTTA TERM 3 2054 - 2009 - g 72 -9.9 -2.8214 | gap 1, overlap 2007 2006 2004 2011 ATTACCAGAAGATCA GATGCGAATTGCAG-TTGGAAA TAA TTTCCAAACAACAATTCGCTCC GGTAAATCAGAATTT dnaN 1734 - 2873 + | DNA-directed DNA polymerase III, beta subunit TERM 4 2911 - 2895 - f 78 -5.8 -4.82333 | opp_overlap 2895 2897 ATAACAACTCAAAAA CACCTC GATGA GAGGCG TTTTTTTGTGAACTA TERM 5 2895 - 2911 + F 85 -3.6 -5.626 | opp_overlap 2895, overlap 2897 ATAACAACTCAAAAA CACCTC GATGA GAGGCG TTTTTTTGTGAACTA TERM 6 3063 - 3075 + F 76 -6.3 -4.64598 | TATAATTACTAGGTA TAACG GAT CGTTA TTTTTCCAGTAATTA LSA0003 3116 - 3343 + | hypothetical protein TERM 7 3865 - 3875 + G 70 -5.4 -4.5081 | CCAACGGCGCCAAGC CAAG GAT CTTG TTTATTTAGGTGTTT recF 3350 - 4477 + | recombination protein F gyrB 4514 - 6490 + | DNA gyrase, B subunit gyrA 6538 - 9111 + | DNA gyrase, A subunit TERM 8 9128 - 9181 + F 93 -6.4 -5.89947 | gap 2, opp_overlap 9128 TTAAAAAAATAAAAA TCGTTTTTGCGTAATTACACTTGTAA GGAT TAACAAGCGTG-TTA-GCAAAAACGA TTTTTTTTAAGTTTG TERM 9 9181 - 9128 - f 93 -6.4 -5.86609 | gap 2, opp_overlap 9128 TTAAAAAAATAAAAA TCGTTTTTGCGTAATTACACTTGTAA GGAT TAACAAGCGTG-TTA-GCAAAAACGA TTTTTTTTAAGTTTG rpsF 9348 - 9644 + | 30S ribosomal protein S6 ssb 9683 - 10195 + | single-stranded DNA binding protein (Ssb) rpsR 10226 - 10465 + | 30S ribosomal protein S18 TERM 10 10480 - 10509 + F 100 -15.9 -5.37593 | opp_overlap 10473 10488 AAAATTAATTTTAGA GTCATCAACCAAG TTTA CTTGGTTGGTGAC TTTTTTAGTTTCCAA TERM 11 11768 - 11786 + G 75 -8.8 -3.66178 | TATTCGACCTGATAT GGATGCGC TCG GTGCGTCC TTTGGGATTCGACGG TERM 12 12003 - 11988 - g 75 -9 -3.62096 | GTTGATCATTCCAAA CCATCG ATTA CGATGG CGCCTAAATTGTATG TERM 13 12533 - 12504 - g 83 -10.7 -3.57144 | overlap 12505 TTTGTTATTGTGAAA CGCCCAGACGGCA TGAT TGCCATCTCGGCA CGCAGTTTAGGGGAC TERM 14 12532 - 12505 - g 83 -12 -2.74144 | overlap 12504 TTGTTATTGTGAAAC GCCCAGACGGCA TGAT TGCCATCTCGGC ACGCAGTTTAGGGGA LSA0010 10683 - 12716 + | putative nucleotide-binding phosphoesterase rplI 12737 - 13189 + | 50S ribosomal protein L9 TERM 15 13209 - 13236 + F 88 -7.8 -4.81212 | opp_overlap 13209, overlap 13204 TTTAATTATCCAAAA GACCGTGATT GCAATCAA AGTCACGGTC TTTTATTATGGTGAC TERM 16 14642 - 14627 - g 90 -6 -5.49729 | AATTATCGAAAAAAA CCGGGC CGGC GCACGG GGCACGGTAAAGCTG dnaC 13323 - 14717 + | replicative DNA helicase C TERM 17 15056 - 15027 - T 100 -15.2 -5.20216 | opp_overlap 15027 GATAGTACGAAAAAA GCGTCAGACAAA AATTAA TTTGTCTGACGC TTTTTATATGCTTAT TERM 18 15027 - 15056 + T 100 -15.2 -5.05079 | opp_overlap 15027 GATAGTACGAAAAAA GCGTCAGACAAA AATTAA TTTGTCTGACGC TTTTTATATGCTTAT LSA0013 16408 - 15068 - | putative nucleobase: cation symporter TERM 19 15541 - 15553 + g 91 -10.5 -4.24294 | CGGCTAATCCTTCAG CGCGG AAG CCGCG TTTTAAGTCATTACT TERM 20 15736 - 15716 - G 80 -9.7 -3.59979 | TTCTGGTAGTTTAAA CCAGCTAGC TTG GCCAACTGG ATCAAGTGAAACCAA TERM 21 16514 - 16500 - H 70 -2.8 -5.2112 | opp_overlap 16512, overlap 16512 AATATGACTAAAAAA CGAATA TAA TAATCG CATAAACTAGCGATA TERM 22 16902 - 16890 - g 74 -6.3 -4.45544 | GGCTACCAATCAAAA CGTTA ATT TAACG GCGATTACAGAAAAA TERM 23 17259 - 17289 + G 71 -8.3 -3.5013 | overlap 17286 CGTTTTAGCGGAATT CTGTTTACCCGCT GTTAA AGTGGGTGGGCAG TTCGTTGCTTTAAAG TERM 24 17329 - 17339 + G 79 -8.2 -4.19238 | opp_overlap 17326 17329 AGTGACACTGAATTA GCGG AAG CCGC TTTTGCAATTGAGAC gidB 16777 - 17517 + | glucose-inhibited division protein B TERM 25 18334 - 18318 - g 81 -5.2 -5.2112 | AATACCATCAAAAAA TCAATC GAATT GATTGA ACAAAGTGGGATTCC parB1 17517 - 18416 + | chromosome partitioning protein, DNA-binding exonuclease parA 18428 - 19195 + | chromosome partitioning ATPase parB2 19185 - 20060 + | chromosome partitioning protein, DNA-binding exonuclease LSA0018 20079 - 20327 + | hypothetical protein LSA0019 20351 - 21451 + | translation-associated GTPase TERM 26 21622 - 21607 - g 74 -4.7 -4.8048 | GTTTCAGACGAAAAA CAAGC TGAAAT GCTTG CTGAAATGTTACCCG LSA0020 21469 - 22143 + | integral membrane protein TERM 27 22210 - 22198 - g 75 -9.1 -3.69663 | ATTAGTATCGAAGAA CGCCA ATT TGGCG CCGTCAGCACGTTAA LSA0021 22180 - 22944 + | putative lipase/esterase TERM 28 22950 - 22988 + F 100 -12.7 -4.82901 | gap 1, opp_overlap 22950 TCTGAAATAAAAAAA TAGCTAGCGGTTAA-CCG ATGT TGGTTTAATCGCTAGCTA TTTTTATGCAAACAA TERM 29 22988 - 22950 - f 100 -10.4 -5.95539 | opp_overlap 22950 TCTGAAATAAAAAAA TAGCTAGCGGTTAACCGA TGT TGGTTTAATCGCTAGCTA TTTTTATGCAAACAA TERM 30 23033 - 23001 - f 100 -15.1 -3.65351 | opp_overlap 23007, overlap 23007 CTATTTTTATGCAAA CAAAAAGTCGGTC TTGGGGG GACCGACTTTTTG CAGATCCGAAGATCT TERM 31 23027 - 23007 - f 100 -8.3 -5.30616 | opp_overlap 23007, overlap 23001 TTATGCAAACAAAAA GTCGGTC TTGGGGG GACCGAC TTTTTGCAGATCCGA TERM 32 23007 - 23027 + F 91 -9.7 -4.59773 | opp_overlap 23001 23007 TTATGCAAACAAAAA GTCGGTCTT GGG GGGACCGAC TTTTTGCAGATCCGA TERM 33 23094 - 23119 + F 90 -9.1 -4.54727 | gap 1, overlap 23095 23096 TGGGGGGATAATCTG TG-CGGTGAAGC CAC GCTTCACCGGTA TTTTACTTTGGAGGA TERM 34 23095 - 23117 + F 93 -12 -3.88396 | overlap 23094 23096 GGGGGGATAATCTGT GCGGTGAAGC CAC GCTTCACCGG TATTTTACTTTGGAG TERM 35 23096 - 23116 + F 100 -15.5 -2.92314 | overlap 23095 23094 GGGGGATAATCTGTG CGGTGAAGC CAC GCTTCACCG GTATTTTACTTTGGA TERM 36 23953 - 23922 - g 95 -5.8 -5.63103 | gap 1, opp_overlap 23922 GCCGAACTAAAAAAA GCCGGTGCGGTC-CA AAT TGTGACCCAACCGAC TGATTTAATTACGAC LSA0022 23325 - 23993 + | haloacid dehalogenase family hydrolase LSA0023 24457 - 23990 - | hypothetical protein TERM 37 25432 - 25466 + r 100 -15.8 -5.99154 | opp_overlap 25432 CGTTAACCAAAAAAA GGTGTGAGGACGAAAG TGA CTTTCGTTCCCGCACC TTTTTTTATTTAATA TERM 38 25466 - 25432 - R 100 -13.6 -5.63103 | opp_overlap 25432 CGTTAACCAAAAAAA GGTGTGAGGACGAAAG TGA CTTTCGTTCCCGCACC TTTTTTTATTTAATA LSA0025 26102 - 25476 - | hypothetical protein TERM 39 25968 - 25929 - G 83 -9.4 -3.99013 | gap 1, opp_overlap 25967, overlap 25964 GAAAAATTGGATAAA CGAGAT-ATCGGCGTTATA AAT CATACCGCCGACAATCCCG CCGAGGACGTAATTT LSA0026 26558 - 26115 - | hypothetical protein TERM 40 26478 - 26462 - G 73 -3.7 -4.99645 | ATTGGACAAAGAAAA TGAGAAT TAA ACTCCCA ACGAGTAGTGAGAGT TERM 41 26566 - 26555 - G 75 -2.2 -5.4111 | AATAACGATAAAAAA GCAT CGAA ACGC CTCCTGGATAGATAA TERM 42 26989 - 27011 + G 78 -5.6 -4.77036 | opp_overlap 26977 26995, overlap 26990 TAACAGCGGTGTCGT TGATAATCGG GTG CCAATTATCG TTTTTGATCATGAAA LSA0027 26675 - 27040 + | hypothetical protein TERM 43 27056 - 27078 + F 100 -9.2 -4.9445 | opp_overlap 27056 GGACTATTTTAAAAA GCAGTGTC CAAAGGC GACACTGC TTTTTGCTTGCTTGT TERM 44 27078 - 27056 - f 91 -9.2 -4.63527 | opp_overlap 27056 GGACTATTTTAAAAA GCAGTGTC CAAAGGC GACACTGC TTTTTGCTTGCTTGT LSA0028 27150 - 28010 + | hypothetical protein TERM 45 28046 - 28023 - T 100 -16.8 -4.78764 | opp_overlap 28023 TAAAGCGATTAAAAA GGCGTCGACA ATTA TGTCGACGCC TTTTTTGACTTTTAA TERM 46 28023 - 28046 + T 100 -16.8 -5.2696 | opp_overlap 28023 TAAAGCGATTAAAAA GGCGTCGACA ATTA TGTCGACGCC TTTTTTGACTTTTAA LSA0029 29401 - 28058 - | hemolysinC family Mg(2+)/Co(2+) transport protein TERM 47 29616 - 29584 - R 80 -6.3 -4.96848 | gap 1, opp_overlap 29584 29612 29614 CTGTTCATATAAAAA GAGCAAACGACGTG TCAATT CACG-CGGCTGCTC TTTAGAGAGAGTATC LSA0030 30484 - 29633 - | putative aldo/keto reductase (oxidoreductase) LSA0031 31800 - 30568 - | hypothetical protein TERM 48 30598 - 30609 + g 78 -5.8 -4.82901 | opp_overlap 30608 TGTTGCCGTTTGTAA CGCT AATA AGCG TTTTTGTAAAGCGGG TERM 49 31862 - 31834 - R 95 -11.8 -4.44461 | opp_overlap 31834 31837, overlap 31851 AACAACGTGATAAAA GAACCCCTGACA ATGTA TGCCAGAGGTTC TCTAGTAGTGATTAA LSA0032 32239 - 31874 - | hypothetical protein LSA0033 33472 - 32333 - | MFS family transporter TERM 50 32469 - 32457 - G 71 -3.3 -5.02476 | AGAGCGCCGAAAAAA GAGCC GGA AGCCC CACCAATGAAGTAGG LSA0035 34693 - 33536 - | putative Iron-sulfur cluster-binding protein TERM 51 33994 - 34028 + g 100 -10 -4.53439 | overlap 33975 33992 CATAAATCACGCTCC GGATTTTAGGCCGGTA TTC TTCCGGCATAAAACCC TTTGTTTGGGTTTGA LSA0036 35506 - 34718 - | putative serine/tyrosine protein phosphatase TERM 52 34809 - 34821 + g 75 -9.1 -3.5936 | overlap 34816 34817 ATTGTGCCGGATTCT TGGCG AAT CGCCA TTTGGGCGGTTTGGA TERM 53 35691 - 35675 - g 70 -5.8 -4.29738 | TGAGATCCACGAAAA CCGCTC GGAAA AAGCGG CTAATTGGATTCATT TERM 54 36430 - 36445 + G 78 -9 -3.86897 | overlap 36421 TTGTTTTAACGGTCC CCACCA TTAT TGGTGG TTTCTGGGGGATGAA LSA0037 35628 - 36572 + | putative ion Mg(2+)/Co(2+) transport protein usp5 36678 - 37160 + | universal stress protein UspA family protein TERM 55 37179 - 37204 + F 100 -11.9 -4.652 | opp_overlap 37179 TAAGTAATCAAAAAA GCCATGACAGC ACAA GTTGTCGTGGC TTTTTAACGTACTTT TERM 56 37204 - 37179 - f 95 -7.5 -5.32565 | opp_overlap 37179 TAAGTAATCAAAAAA GCCATGACAGC ACAA GTTGTCGTGGC TTTTTAACGTACTTT tag1 37243 - 37788 + | 3-methyl-adenine DNA glycosylase I LSA0040 37871 - 38365 + | hypothetical protein TERM 57 38410 - 38374 - f 73 -7.3 -4.13591 | opp_overlap 38378, overlap 38375 38378 TCAATAGCATACAAA CGGAGTTGGGCCAAAAA TCA CTTTTGGCCCAACTTTT TTAATCCCCGACTGA TERM 58 38409 - 38375 - f 79 -10.8 -3.07431 | opp_overlap 38378, overlap 38374 38378 CAATAGCATACAAAC GGAGTTGGGCCAAAAA TCA CTTTTGGCCCAACTTT TTTAATCCCCGACTG TERM 59 38378 - 38406 + F 100 -16.2 -5.14563 | opp_overlap 38375 38374 38378 TAGCATACAAACGGA GTTGGGCCAAAA ATCAC TTTTGGCCCAAC TTTTTTAATCCCCGA TERM 60 38406 - 38378 - f 100 -16.9 -2.74244 | opp_overlap 38378, overlap 38375 38374 TAGCATACAAACGGA GTTGGGCCAAAAA TCA CTTTTGGCCCAAC TTTTTTAATCCCCGA panE 38535 - 39473 + | 2-dehydropantoate 2-reductase TERM 61 39528 - 39510 - g 82 -10.4 -3.65722 | opp_overlap 39503 AAAACAACCTTTAAA CATTGAAG TCA CTTCAATG CACTACCAAAAACTA usp1 39487 - 39954 + | universal stress protein UspA family protein TERM 62 39997 - 39965 - f 79 -7.2 -4.36127 | gap 1, opp_overlap 39965 GTTAAGAATCTAAAA GCACCCAAA-CAA TTTTTATT TTGTTTTGGGTGC TTTTTCGATTAGAAT TERM 63 39965 - 39997 + F 83 -7.2 -4.74504 | gap 1, opp_overlap 39965 GTTAAGAATCTAAAA GCACCCAAA-CAA TTTTTATT TTGTTTTGGGTGC TTTTTCGATTAGAAT LSA0043 40035 - 40763 + | integral membrane protein LSA0044 40849 - 41064 + | hypothetical protein TERM 64 41110 - 41079 - T 100 -12.4 -5.48063 | opp_overlap 41079 ACTGAAGACAAAAAA GTCGCCGTGAACAA GCAA TTGTTCATAGCGAC TTTTTGATTGGATGA TERM 65 41079 - 41110 + T 100 -12.4 -4.88407 | opp_overlap 41079 ACTGAAGACAAAAAA GTCGCCGTGAACAA GCAA TTGTTCATAGCGAC TTTTTGATTGGATGA TERM 66 41127 - 41144 + T 100 -9.9 -5.08255 | opp_overlap 41127 TTTTGATTGGATGAA GTGTGTG GTAG CACACAC TTTTATTTTAGACGT TERM 67 41144 - 41127 - T 77 -9.9 -3.16564 | opp_overlap 41127 TTTTGATTGGATGAA GTGTGTG GTAG CACACAC TTTTATTTTAGACGT cfa 42339 - 41152 - | cyclopropane-fatty-acyl-phospholipid synthase LSA0046 42504 - 43517 + | putative transport protein TERM 68 43545 - 43523 - T 100 -12.7 -6.01187 | opp_overlap 43523 AACGAAATAAAAAAA GGACCCGGC ATTTA GCCGAGTCC TTTTTAATTGGTTTA TERM 69 43523 - 43545 + T 100 -10.5 -4.95957 | opp_overlap 43523 AACGAAATAAAAAAA GGACCCGGC ATTTA GCCGAGTCC TTTTTAATTGGTTTA LSA0047 43819 - 43574 - | hypothetical protein TERM 70 44036 - 44061 + G 71 -7 -4.18197 | gap 1, opp_overlap 44042 44052 TTTAAAGAGTCATGA CATCAAGCAAC AGGAA GTTGCT-GATG TTTTAAATAAAACGT LSA0048 43989 - 44186 + | hypothetical protein TERM 71 44253 - 44274 + T 100 -13.1 -6.06723 | opp_overlap 44253 TTAATAATAAAAAAA CGATAAGCC TGAG GGCTTATCG TTTTTTTTTAGAAAC TERM 72 44274 - 44253 - T 100 -13.1 -5.95946 | opp_overlap 44253 TTAATAATAAAAAAA CGATAAGCC TGAG GGCTTATCG TTTTTTTTTAGAAAC ddl 45345 - 44293 - | D-alanine--D-alanine ligase (D-alanylalanine synthetase) TERM 73 45444 - 45470 + H 70 -8.1 -3.4052 | GTTAACTATTTTGAG TTAGCACTCGT GATAA AAGAGTGCTAA TTACTTGCATTAGAC LSA0050 45540 - 45980 + | Hsp20 family heat-shock protein TERM 74 45992 - 46017 + F 100 -9.8 -5.61596 | overlap 45989 45988 ATAATGAGTATTTCG GAGTCACCGA GTTTAG TTGGTGACTC TTTTTTTATGGCAAT TERM 75 46531 - 46513 - g 70 -3.9 -4.78572 | gap 1, opp_overlap 46513 GGGCAATCAACAAAA GGT-GCAA CTGA TTGCGACC TTAATTCATAAACCA LSA0051 46103 - 46999 + | putative Na(+) ABC exporter, ATP-binding subunit TERM 76 47504 - 47488 - g 87 -4.5 -5.4505 | CTGGGCAACAAAAAA TTGATCA ATC TAATCAA AAACAAGTGGGAGAA LSA0052 46992 - 48236 + | putative Na(+) ABC exporter, membrane-spanning/permease subunit TERM 77 48275 - 48242 - f 100 -13.3 -6.20267 | gap 1, opp_overlap 48242 GCAAAAATAAAAAAA CGGTCGGCATCATTCT AAA AGAA-GATGTCGACCG TTTTTGATTGCAATC TERM 78 48242 - 48275 + F 100 -15.5 -4.87291 | gap 1, opp_overlap 48242 GCAAAAATAAAAAAA CGGTCGGCATCATTCT AAA AGAA-GATGTCGACCG TTTTTGATTGCAATC TERM 79 48455 - 48438 - g 73 -5.5 -4.64144 | AAGAATGGTTAAAAA CAGCCGA AATT CCAGCTG ATAAACCAGCAACCG TERM 80 48769 - 48790 + G 70 -7.9 -3.70007 | TACGGCACACCACGC GCTCTACGC TGAA GCGGGGAGC TTAATTTTACCTGAT pepO 48377 - 50272 + | endopeptidase O TERM 81 50329 - 50347 + F 72 -8.2 -3.55444 | opp_overlap 50332, overlap 50332 GCACAGCTCGGTGAA TAACTGCT GGA AGCAGTTG TTTAACGAGTGACGC TERM 82 50332 - 50344 + F 74 -7.7 -3.91716 | opp_overlap 50332, overlap 50329 CAGCTCGGTGAATAA CTGCT GGA AGCAG TTGTTTAACGAGTGA TERM 83 50465 - 50499 + F 100 -13.7 -3.91084 | opp_overlap 50465 TTTAGAAATCAAAAA GAGGTGCATCACAAA TTTAT TTTGTGGCGCACCTC TTTCATTGGAAATGG TERM 84 50499 - 50465 - f 100 -13.7 -5.04601 | opp_overlap 50465 TTTAGAAATCAAAAA GAGGTGCATCACAAA TTTAT TTTGTGGCGCACCTC TTTCATTGGAAATGG maa 50525 - 51142 + | maltose O-acetyltransferase (maltose transacetylase) LSA0055 52298 - 51132 - | putative thiamine/thiamine precursor:cation symporter TERM 85 51568 - 51558 - G 80 -4.6 -5.19819 | opp_overlap 51558 AAATAAAATTAAAAA GCCG AAG CGAC TAGTTGCTAGAAACT TERM 86 51660 - 51693 + g 100 -11.1 -5.12617 | opp_overlap 51658 51660 ACTACCAAGAAAGTA GCCGCTAGTACTC CATAAAGA GAGTGCTAGTGGC TTTTTTGAATCCTTG TERM 87 52174 - 52158 - G 77 -3.6 -5.19251 | overlap 52160 TAACAGCAATAAAAA GGCACC AATCA GGTGAC CAATGATAATGGCTA thiE 52962 - 52288 - | thiamine-phosphate pyrophosphorylase (thiamine-phosphate synthase) thiD 53767 - 52955 - | phosphomethylpyrimidine kinase (HMP-phosphate kinase) thiM 54569 - 53760 - | hydroxyethylthiazole kinase TERM 88 53884 - 53933 + g 79 -10.8 -3.17219 | opp_overlap 53892 53896 GTGGGCATTGCTTCG GCGACTAATTGAC-CGGCGACGGC AAAG GTCGTTGCCGCGTCGA-TGGCCGC TTGATAGGGATTGTC TERM 89 54632 - 54599 - H 100 -9.7 -5.79588 | opp_overlap 54597 54599 TTAAAATCAAAAAAA CCACTTTTAGATGCA CGAA TGCATAGAAAAGTGG TGTTGGTTTAATAGA TERM 90 54599 - 54632 + H 78 -9.7 -3.35849 | opp_overlap 54599, overlap 54597 TTAAAATCAAAAAAA CCACTTTTAGATGCA CGAA TGCATAGAAAAGTGG TGTTGGTTTAATAGA TERM 91 55571 - 55585 + G 70 -5.7 -4.3255 | TGGTGCCGGTTTATA CGGTT TCTTC AACCG TTTATTGATTCCAAC nagE 54975 - 56993 + | N-acetylglucosamine and glucose-specific phosphotransferase system, enzyme IIABC TERM 92 57032 - 57006 - T 100 -16.7 -5.4148 | opp_overlap 57006 TAAACAATCAAAAAA CGCCTGACGAA TTAAG TTCGTCAGGCG TTTTTGTGTGGTATA TERM 93 57006 - 57032 + T 100 -17.4 -5.02502 | opp_overlap 57006 TAAACAATCAAAAAA CGCCTGACGAAT TAA GTTCGTCAGGCG TTTTTGTGTGGTATA LSA0061 57997 - 57053 - | extracellular protein precursor TERM 94 57595 - 57614 + g 77 -3.5 -5.1485 | gap 1, overlap 57570 57598 TCGTCGCGTTTGTGA CGCCGGCG GTTAA CGCTG-CG TTTTTATATTGGTTC LSA0062 59245 - 58097 - | integral membrane protein TERM 95 58254 - 58228 - G 71 -8.6 -3.55202 | overlap 58215 58226 58229 TACCCGTAAATAAGA CGGGTGGTAAGG CAG CCAGACCACCCA GTAGAAGGTAGATAT TERM 96 58253 - 58229 - G 71 -9.9 -2.72639 | overlap 58215 58228 58226 ACCCGTAAATAAGAC GGGTGGTAAGG CAG CCAGACCACCC AGTAGAAGGTAGATA TERM 97 58379 - 58358 - G 78 -5.1 -4.94672 | AAAGAACAGTAAAAA TTGGCGACT GAAT ATCCGCCAA GCAACGGCATTTTCG TERM 98 58503 - 58519 + g 70 -5.9 -4.25104 | opp_overlap 58503, overlap 58504 TAGTAGAAAACATCA TTACCAA AAG TTGGTAG TTTTAATAAACGCCA purA 59513 - 60793 + | adenylosuccinate synthetase LSA0064 60964 - 62274 + | putative nucleobase:cation symporter TERM 99 62284 - 62308 + F 100 -14.3 -5.80003 | GGTTAATACGACTTA GCGGTTGGTCC TGT GGATCAGCCGC TTTTTTGTTTCTTAA LSA0065 62398 - 62856 + | integral membrane protein TERM 100 62955 - 62942 - g 75 -2.3 -5.40072 | opp_overlap 62942 TGTTGTGCAAAAAAA GACGA AGAA TCGGC TTATTAATAGTCTGC srtA1 62931 - 63593 + | putative surface protein transpeptidase 1 precursor (sortase 1) TERM 101 63642 - 63602 - f 100 -12 -5.26875 | gap 1, opp_overlap 63606, overlap 63606 TGGCTAATTAAAAAA CAAAGACCCCAG-TGTGGT AAAT ACCGCAACTGGGGTCTTTT TGTGTATTACTAAAA TERM 102 63606 - 63638 + F 100 -15 -5.10968 | gap 1, opp_overlap 63602 63606 TAATTAAAAAACAAA GACCCCAG-TGTGGT AAAT ACCGCAACTGGGGTC TTTTTGTGTATTACT TERM 103 63638 - 63606 - f 100 -12.8 -5.12785 | gap 1, opp_overlap 63606, overlap 63602 TAATTAAAAAACAAA GACCCCAG-TGTGGT AAAT ACCGCAACTGGGGTC TTTTTGTGTATTACT TERM 104 63695 - 63658 - f 86 -9.5 -4.30576 | gap 1, opp_overlap 63658 63659, overlap 63659 63660 63694 TGTGTATTACTAAAA TGGTGTATTTTGTTCC GCAAAAT GGAACAAAATACAC-A TCGATTTCGTCTAAA TERM 105 63695 - 63659 - f 80 -11.1 -3.18024 | opp_overlap 63658 63659, overlap 63658 63660 63694 GTGTATTACTAAAAT GGTGTATTTTGTTCC GCAAAAT GGAACAAAATACACA TCGATTTCGTCTAAA TERM 106 63659 - 63695 + F 81 -11.8 -2.69601 | opp_overlap 63658 63659 63660 63694, overlap 63658 GTGTATTACTAAAAT GGTGTATTTTGTTCCG CAAAA TGGAACAAAATACACA TCGATTTCGTCTAAA TERM 107 63694 - 63660 - f 93 -14.6 -2.50493 | opp_overlap 63659 63658, overlap 63658 63659 TGTATTACTAAAATG GTGTATTTTGTTCC GCAAAAT GGAACAAAATACAC ATCGATTTCGTCTAA LSA0067 63798 - 64829 + | putrescine carbamoyltransferase TERM 108 65276 - 65298 + GF 70 -5.6 -4.35524 | ACTCATTAGTTGTTA TCCAATTGCT GAT AGTAAATGGA TTTTGAATTTAGCGG LSA0068 64869 - 65849 + | putative amino acid/polyamine antiporter (N-terminal fragment), authentic frameshift TERM 109 65961 - 65974 + GF 73 -5.3 -4.59773 | TAGGGTCATATATGT TGATG TTCC CATCA TTTTTAAAACTCAGA LSA0069 65735 - 66229 + | putative amino acid/polyamine antiporter (C-terminal fragment), authentic frameshift LSA0070 66216 - 67343 + | agmatine deiminase TERM 110 68223 - 68212 - g 95 -7.2 -5.41746 | opp_overlap 68211 AATTTGTTAAAAAAA CCGG TAAT CCGG CTGTGATTGGCGCAT LSA0071 67359 - 68294 + | carbamate kinase TERM 111 68299 - 68336 + F 72 -9.3 -2.64099 | opp_overlap 68306, overlap 68306 TTCATCAGTAGTTTT CAAAGAAGCGACTAG TCGATTTT CTAGTCGCTTTTTGG GTTATAATCAAGCGA TERM 112 68329 - 68306 - f 77 -8.2 -3.91716 | opp_overlap 68299 68306 GTAGTTTTCAAAGAA GCGACTAG TCGATTTT CTAGTCGC TTTTTGGGTTATAAT TERM 113 68306 - 68329 + F 95 -8.2 -4.78752 | opp_overlap 68306, overlap 68299 GTAGTTTTCAAAGAA GCGACTAG TCGATTTT CTAGTCGC TTTTTGGGTTATAAT LSA0072 68379 - 69482 + | putative peptidylarginine deiminase (amidinotransferase) LSA0073 69522 - 70268 + | RpiR family transcriptional regulator TERM 114 70283 - 70324 + T 85 -3.8 -5.65927 | gap 1, opp_overlap 70283 GTGAAAATATAAAAA GAAGCTTAACCA-CGGG GAATACCAA TCCGATGGCTGAGCTTC TTTTTTATTTCCCTG TERM 115 70324 - 70283 - T 76 -3.1 -5.28983 | gap 1, opp_overlap 70283 GTGAAAATATAAAAA GAAGCTTAACCA-CGG GGAATACCAAT CCGATGGCTGAGCTTC TTTTTTATTTCCCTG TERM 116 70362 - 70351 - T 77 -3 -5.4505 | CCTGGTAATAAAAAA TGAT AGCA ATCA AAAAATAACGGTCAG LSA0074 70929 - 70360 - | XRE family DNA-binding protein TERM 117 71195 - 71212 + H 100 -8.5 -5.14563 | opp_overlap 71195 TTAAAATTTTAATAA GCTTAAC AAGA GTTAAGC TTTTTTGATAAAACG TERM 118 71212 - 71195 - H 74 -8.5 -3.73106 | opp_overlap 71195 TTAAAATTTTAATAA GCTTAAC AAGA GTTAAGC TTTTTTGATAAAACG TERM 119 71248 - 71226 - H 79 -7.1 -4.36914 | GCTTTTTTGATAAAA CGTTAAAGC GTATA ACTTTAACG AGTCATGATGGGTGT LSA0076 71444 - 71998 + | putative DNA invertase (Plasmidic resolvase) TERM 120 72033 - 72006 - f 100 -14.2 -4.66938 | opp_overlap 72006 AGGCCTAACACAAAA GCCCGCTTATCT TCTC AGATAGGCGGGC TTTGCTGGGTGGATA TERM 121 72006 - 72033 + F 100 -16.4 -3.767 | opp_overlap 72006 AGGCCTAACACAAAA GCCCGCTTATCT TCTC AGATAGGCGGGC TTTGCTGGGTGGATA TERM 122 72073 - 72106 + F 100 -14.1 -4.04719 | opp_overlap 72073 TTTTATATAAAAAAA TAGTCATAACGATGC AATT GCATCATTATGACTA TTTATCGTGTATACT TERM 123 72106 - 72073 - f 100 -16.3 -5.71712 | opp_overlap 72073 TTTTATATAAAAAAA TAGTCATAACGATGC AATT GCATCATTATGACTA TTTATCGTGTATACT LSA0077 72438 - 73151 + | two-component system, response regulator TERM 124 73392 - 73382 - g 78 -4 -5.10208 | opp_overlap 73382 TAATGCGAATAAAAA TATC AAG GATA TTATTGGCGATATGG TERM 125 73510 - 73498 - g 70 -2.6 -5.00616 | overlap 73500 CTGTTGGCCAAAAAA CGCG TAACC CACG TGTGAAACAGGCGAT LSA0078 73161 - 75059 + | two-component system, sensor histidine kinase TERM 126 75301 - 75287 - g 91 -8.6 -4.73092 | ATAATTCAAAAGAAA GCTTAG TGC CTAAGC TGAAGGAAGCCATGA LSA0079 75049 - 76380 + | hypothetical protein LSA0080 76385 - 77206 + | hypothetical protein LSA0081 77241 - 78047 + | beta-lactamase family hydrolase htrA 78181 - 79404 + | serine protease HtrA TERM 127 79488 - 79457 - f 100 -16.6 -4.96773 | opp_overlap 79459, overlap 79459 CGAACTAAAAATAAA GACGCGCGACCGGA TTCT TCCGATCGCGCGTT TTTTTTGTGGCGCTA TERM 128 79486 - 79459 - f 100 -19.2 -4.08353 | opp_overlap 79459, overlap 79457 AACTAAAAATAAAGA CGCGCGACCGGA TTCT TCCGATCGCGCG TTTTTTTTGTGGCGC TERM 129 79459 - 79486 + F 100 -17 -5.93809 | opp_overlap 79459 79457 AACTAAAAATAAAGA CGCGCGACCGGA TTCT TCCGATCGCGCG TTTTTTTTGTGGCGC LSA0083 79596 - 79643 + | hypothetical protein LSA0084 79985 - 80464 + | SPOUT methyltransferase superfamily protein TERM 130 80475 - 80502 + F 100 -10 -5.38047 | gap 1, opp_overlap 80475 AATAAGAAAAATTGA GAGCC-CAGACAA AAT TTGTCTGCGGTTC TTTTTTATATCCATC LSA0085 80604 - 81251 + | lipoprotein precursor TERM 131 81306 - 81255 - T 100 -18.4 -2.94293 | gap 1, opp_overlap 81267, overlap 81267 GTTCCAAGATAATCA CCAACTCAAAAAGCGCGCTAAGACA ATT TGTCTTAACGCGCTTTTTGAAT-GT CTTATTTTTACAAGT TERM 132 81295 - 81267 - T 100 -18.3 -4.7629 | opp_overlap 81267, overlap 81255 TCACCAACTCAAAAA GCGCGCTAAGACA ATT TGTCTTAACGCGC TTTTTGAATGTCTTA TERM 133 81267 - 81295 + T 100 -16.1 -4.74453 | opp_overlap 81267 81255 TCACCAACTCAAAAA GCGCGCTAAGACA ATT TGTCTTAACGCGC TTTTTGAATGTCTTA add 82333 - 81314 - | adenosine deaminase TERM 134 82598 - 82584 - g 88 -10 -4.11664 | opp_overlap 82596 GGCACAACAATGAAA CGCGAA ATT TTCGCG GGACTGACAACGTTT LSA0087 82503 - 83846 + | putative adenine/adenosine:cation symporter TERM 135 85288 - 85263 - g 75 -3.1 -5.1287 | TGGACACTCAAAAAA GGTGCGATGGC TTCA ACCGCTGCACC CGATGATAACAACAT adeC1 83856 - 85640 + | adenine deaminase TERM 136 85651 - 85681 + T 100 -18.5 -5.36965 | opp_overlap 85651 AATAGGTAATAAAAA GGGATCCGACAAA ATAAC TTTGTCGGATCCC TTTTTTGTAATATTG TERM 137 85681 - 85651 - T 100 -19.2 -5.12971 | opp_overlap 85651 AATAGGTAATAAAAA GGGATCCGACAAAA TAA CTTTGTCGGATCCC TTTTTTGTAATATTG TERM 138 85748 - 85788 + T 77 -9.7 -3.17051 | opp_overlap 85760 85763, overlap 85750 85760 85763 TCCTTCCGGTTAACC CTGAGCGCCAAATAATCGC CGA GCGATTATTCGTCCCTCTG TGTTAATCCTCGGGA TERM 139 85750 - 85786 + T 80 -10.9 -3.14693 | opp_overlap 85760 85763, overlap 85748 85760 85763 CTTCCGGTTAACCCT GAGCGCCAAATAATCGC CGA GCGATTATTCGTCCCTC TGTGTTAATCCTCGG TERM 140 85760 - 85776 + T 75 -9.5 -3.21622 | opp_overlap 85760 85763, overlap 85750 85748 85763 ACCCTGAGCGCCAAA TAATCGC CGA GCGATTA TTCGTCCCTCTGTGT TERM 141 85776 - 85760 - T 78 -9.5 -3.57263 | opp_overlap 85760 85750 85748 85763, overlap 85763 ACCCTGAGCGCCAAA TAATCGC CGA GCGATTA TTCGTCCCTCTGTGT TERM 142 85910 - 85874 - T 82 -10.3 -3.53012 | overlap 85883 CTGTGCTTTGCTAAA CTTATCAAACCGGTGAT TTC ATCACCAATTCGCTAAG CTCTGCAAATGCTCA TERM 143 86023 - 86005 - T 72 -8.2 -3.55444 | opp_overlap 86008, overlap 86008 GCGTCACTCGTCAAA CAACTGCT TAC AGCAGTTA TTCGCCGAGCTGTGC TERM 144 86020 - 86008 - T 74 -7.7 -3.91716 | opp_overlap 86008, overlap 86005 TCACTCGTCAAACAA CTGCT TAC AGCAG TTATTCGCCGAGCTG LSA0089 87007 - 86081 - | putative drug transport protein TERM 145 87239 - 87249 + G 74 -4.6 -4.7629 | overlap 87235 AGGAATCATCTTAGC GGGG CTG CTCC TTTTTAAATTAGTAG TERM 146 87843 - 87855 + G 71 -4.9 -4.63527 | opp_overlap 87843 TGGTATTCAACCAAC TATGT TCA ACATA TTTTTAAAGTACTCA LSA0090 87186 - 88481 + | putative extracellular arylsulfate sulfotransferase (N-terminal fragment), authentic frameshift LSA0091 88481 - 88849 + | putative extracellular arylsulfate sulfotransferase (C-terminal fragment), authentic frameshift LSA0092 88883 - 89425 + | hypothetical protein LSA0093 89509 - 90345 + | integral membrane protein TERM 147 90376 - 90410 + T 100 -21.7 -5.14563 | opp_overlap 90376 TTAAACAATAAAAAA GGGGTTGGGACAAAA TTTAT TTTTGTCCCAACCCC TTTTTTGATACCCGA TERM 148 90410 - 90376 - T 100 -21.7 -5.72254 | opp_overlap 90376 TTAAACAATAAAAAA GGGGTTGGGACAAAA TTTAT TTTTGTCCCAACCCC TTTTTTGATACCCGA TERM 149 90505 - 90487 - T 74 -8.2 -3.66356 | opp_overlap 90477 90490, overlap 90488 ACGCCGAATGTCAAA CGATTGCT TAC AGCAATCA TTCGCCACTCTCTGT TERM 150 90504 - 90488 - T 73 -9.5 -2.79492 | opp_overlap 90477 90490, overlap 90487 CGCCGAATGTCAAAC GATTGCT TAC AGCAATC ATTCGCCACTCTCTG LSA0094 91786 - 90563 - | MFS family transporter TERM 151 92295 - 92284 - g 77 -3.6 -5.09173 | overlap 92289 92291 CAACATTTGAAAAAA GCCA ATAC CGGC CTTTTTGGCGCGGTT TERM 152 92597 - 92611 + G 73 -5.7 -4.47786 | GCTACGACGCGCTGG TCGCA ATCGC TGCGA TTTATTTGGGTAGTT LSA0095 91981 - 93513 + | putative transport protein TERM 153 93555 - 93518 - T 100 -18.7 -5.28176 | opp_overlap 93522, overlap 93522 TTTATCTATAAAAAA TAAAGAACCCGGACAAA TTAA TTTGTCCGGGTTCTTTT TGATATTTGAAACTG TERM 154 93522 - 93551 + T 100 -19.5 -4.93696 | opp_overlap 93518 93522 TCTATAAAAAATAAA GAACCCGGACAAA TTAA TTTGTCCGGGTTC TTTTTGATATTTGAA TERM 155 93551 - 93522 - T 100 -19.5 -5.13354 | opp_overlap 93522, overlap 93518 TCTATAAAAAATAAA GAACCCGGACAAA TTAA TTTGTCCGGGTTC TTTTTGATATTTGAA TERM 156 93712 - 93748 + T 76 -9.5 -3.31792 | opp_overlap 93712 CTGTGCTTTGCTAAA CTTATCGAACCGGTGAT TCC ATCACCAATTCGCTAAG TTCTGCAAATGCTCA TERM 157 93748 - 93712 - T 100 -13.9 -3.53012 | opp_overlap 93712 CTGTGCTTTGCTAAA CTTATCGAACCGGTGAT TCC ATCACCAATTCGCTAAG TTCTGCAAATGCTCA sipA1 94400 - 93789 - | Signal peptidase I (leader peptidase I) LSA0097 94628 - 94485 - | extracellular small peptide precursor LSA0098 94813 - 96066 + | hypothetical protein racD 96063 - 96779 + | aspartate racemase TERM 158 97121 - 97155 + G 100 -12 -4.43879 | opp_overlap 97119, overlap 97120 97120 97123 TGTCCACCAAGTAGC GCGCTGGCGGCGCAGT TAT ACAGCGCTGCCACCAC TTTTAATTCGGTCAT TERM 159 97123 - 97153 + G 90 -13.2 -2.54881 | opp_overlap 97119, overlap 97120 97120 97121 TCCACCAAGTAGCGC GCTGGCGGCGCAGT TAT ACAGCGCTGCCACC ACTTTTAATTCGGTC gpm1 96789 - 97496 + | phosphoglycerate mutase LSA0101 97477 - 98628 + | putative penicillin-binding protein precursor (Beta-lactamase class C) TERM 160 98634 - 98669 + T 100 -12.7 -4.92314 | opp_overlap 98634 ACTAGTCTAAAAAAA GAGCGCGAGACAAAA AATAAC TTTTGTCCTGCGCTC TTTTTATGCGTTAGT TERM 161 98669 - 98634 - T 100 -13.4 -5.44721 | opp_overlap 98634 ACTAGTCTAAAAAAA GAGCGCGAGACAAAAA ATAA CTTTTGTCCTGCGCTC TTTTTATGCGTTAGT LSA0102 99269 - 98673 - | integral membrane protein LSA0103 99777 - 99295 - | MarR family transcriptional regulator TERM 162 99516 - 99504 - G 74 -4.8 -4.82901 | opp_overlap 99504 CTGGTGTGATAAAAA CGTG AGTCA CACG CTTGTCATGTTCATC TERM 163 99896 - 99844 - R 100 -14.4 -3.79445 | opp_overlap 99867, overlap 99848 99850 AAGCATCAAGGTAAA GCAATATTGTTCAACCTATCACAT CGCTC ACGTGATAGGTTGAACAATCAGGC TAATAAAAAAACCAC TERM 164 99892 - 99848 - R 100 -16.8 -3.57507 | opp_overlap 99867, overlap 99844 99850 ATCAAGGTAAAGCAA TATTGTTCAACCTATCACAT CGCTC ACGTGATAGGTTGAACAATC AGGCTAATAAAAAAA TERM 165 99890 - 99850 - R 100 -19.4 -3.3568 | opp_overlap 99867, overlap 99848 99844 CAAGGTAAAGCAATA TTGTTCAACCTATCACAT CGCTC ACGTGATAGGTTGAACAA TCAGGCTAATAAAAA TERM 166 99928 - 99908 - R 93 -6.2 -5.80364 | gap 1, opp_overlap 99908 99907 AGGCTAATAAAAAAA CCACGACCA ACAT TGGT-GTGG CTTTGAGCGGATTCA tpx 100443 - 99949 - | Thiol peroxidase (hydroperoxide reductase, peroxiredoxin) LSA0105 100555 - 100758 + | hypothetical protein LSA0106 100870 - 102144 + | cell surface protein precursor TERM 167 102204 - 102173 - f 100 -8 -5.56264 | opp_overlap 102173 GTTAAACAGAAAAAA GTTTGGCTCTCCCT GAGA AGGAAGGGTCAAAC TTTTTTAGTTAAAAT TERM 168 102173 - 102204 + F 100 -10.2 -5.27477 | opp_overlap 102173 GTTAAACAGAAAAAA GTTTGGCTCTCCCT GAGA AGGAAGGGTCAAAC TTTTTTAGTTAAAAT gmk1 102240 - 102800 + | guanylate kinase TERM 169 102808 - 102844 + T 100 -13.1 -4.15106 | opp_overlap 102808, overlap 102816 GTCAATAACAAAAAA GGGAAGTCCAACAAAAC GTT GTTTTGTCAGGCTTCCC TTTTAACGATTAGTG TERM 170 102844 - 102808 - T 100 -15.3 -5.64873 | opp_overlap 102808 102816 GTCAATAACAAAAAA GGGAAGTCCAACAAAAC GTT GTTTTGTCAGGCTTCCC TTTTAACGATTAGTG LSA0108 103049 - 102861 - | hypothetical protein TERM 171 103355 - 103366 + G 72 -7.2 -4.07568 | overlap 103364 TGAGTGAAATGACGA CGGC GCTG GCCG TTTTAAAAGCAAACG LSA0109 103339 - 103767 + | FUR family transcriptional regulator LSA0110 103786 - 104262 + | cell surface protein precursor LSA0111 104298 - 105116 + | hypothetical protein LSA0112 105138 - 105614 + | hypothetical protein LSA0113 105663 - 106592 + | hypothetical protein TERM 172 106698 - 106682 - g 73 -5.1 -4.70626 | opp_overlap 106682 106691, overlap 106683 106685 106686 CAACAAGTTCAAAAA GTATCAG CAG CAGATAC TGCTGTTGGAAAAGA TERM 173 106706 - 106686 - g 70 -9.7 -2.55019 | opp_overlap 106682 106691, overlap 106682 106685 106683 AAGTTCAAAAAGTAT CAGCAGCAG ATA CTGCTGTTG GAAAAGAAAATTCAG LSA0114 106589 - 107347 + | cell surface protein precursor TERM 174 107818 - 107832 + G 79 -7.8 -4.25256 | opp_overlap 107814, overlap 107814 107816 AATTACAAGACGGCA CACCGG TGT CTGGTG TTGTTTTAATGGCGG TERM 175 108005 - 108028 + G 77 -8.2 -4.07568 | opp_overlap 108009 CACGGTTAGCGCTAA TCAATCGTTG ACGA CGACGGTTGA TTTTGGCAAGACCAA LSA0115 107334 - 108104 + | cell surface protein precursor LSA0116 108324 - 108575 + | hypothetical protein TERM 176 108962 - 108972 + G 79 -3.2 -5.27335 | AACGCCGGCTGATAA CGGT CAA ACTG TTTTTGTTTCGCAAA TERM 177 109365 - 109341 - g 74 -4.2 -4.9448 | opp_overlap 109348, overlap 109344 ATTCAGGAAACAAAA GCACCAACTG GCTAT CAGTTGGATC AAACACCTCAGTTTG TERM 178 109362 - 109344 - g 71 -8.9 -3.34291 | opp_overlap 109348, overlap 109341 CAGGAAACAAAAGCA CCAACTG GCTAT CAGTTGG ATCAAACACCTCAGT LSA0118 108609 - 110810 + | hypothetical protein LSA0119 110976 - 111416 + | hypothetical protein TERM 179 111426 - 111458 + T 100 -15.8 -6.00814 | opp_overlap 111426 111428, overlap 111428 CAATAATTAAAAAAA TAGCGTCGAAAACA ATTAC TGTTTTCGACGCTG TTTTTTTTAGTTATT TERM 180 111458 - 111426 - T 100 -14.3 -5.71638 | opp_overlap 111426 111428, overlap 111428 CAATAATTAAAAAAA TAGCGTCGAAAACAA TTA CTGTTTTCGACGCTG TTTTTTTTAGTTATT TERM 181 111456 - 111428 - T 100 -16.9 -4.46828 | opp_overlap 111426 111428, overlap 111426 ATAATTAAAAAAATA GCGTCGAAAACAA TTA CTGTTTTCGACGC TGTTTTTTTTAGTTA TERM 182 111428 - 111456 + T 100 -16.2 -4.61485 | opp_overlap 111428 111426, overlap 111426 ATAATTAAAAAAATA GCGTCGAAAACA ATTAC TGTTTTCGACGC TGTTTTTTTTAGTTA LSA0120 112740 - 111469 - | putative GTP-binding protein TERM 183 112799 - 112817 + r 75 -8.9 -3.56727 | opp_overlap 112799, overlap 112802 TTCTGCATTAAAAAA GAAGCTG GTAGG CAGCTTC TTATCGTTAATTAGC TERM 184 112817 - 112799 - R 100 -8.9 -5.14563 | opp_overlap 112799 112802 TTCTGCATTAAAAAA GAAGCTG GTAGG CAGCTTC TTATCGTTAATTAGC LSA0121 112926 - 112885 - | hypothetical protein TERM 185 113044 - 113018 - R 100 -8.8 -5.04356 | opp_overlap 113018 TGAAATAATTAAAAA GCCAATCGTC AGTAAAA GACGATTAGC TTTATTTAAATTATT TERM 186 113018 - 113044 + r 76 -6.6 -4.52669 | opp_overlap 113018 TGAAATAATTAAAAA GCCAATCGTC AGTAAAA GACGATTAGC TTTATTTAAATTATT dhaT 114224 - 113055 - | 1,3-propanediol dehydrogenase TERM 187 114142 - 114157 + g 70 -7.6 -3.69216 | GTAATATTTAACATT TTGGTG CGAT CACCAA TCTTTTCGATGACGC LSA0123 114450 - 115337 + | ROK family sugar kinase TERM 188 115489 - 115500 + G 73 -3.6 -5.02074 | overlap 115488 ATGGGGACTGTTATC GGCG CAGG CGTC TTTTTTAAAGCATCA LSA0125 115396 - 116748 + | putative amino acid/polyamine transport protein TERM 189 116792 - 116758 - T 100 -14.5 -5.99154 | gap 1, opp_overlap 116758 GATTAAATAAAAAAA CGGCTAAGACCTTGTA AAAT CACA-GGTCTTAGCCG TTTTTATTTAAGCTG TERM 190 116758 - 116792 + T 100 -13.8 -5.28942 | gap 1, opp_overlap 116758 GATTAAATAAAAAAA CGGCTAAGACCTTGT AAAATC AC-AGGTCTTAGCCG TTTTTATTTAAGCTG LSA0126 118236 - 116800 - | putative amino-acid/polyamine transport protein LSA0127 118452 - 119210 + | peptide ABC transporter ATP-binding protein TERM 191 119247 - 119263 + G 70 -7.9 -3.58329 | opp_overlap 119247 GGAAATTATCATTAA CCGGCAT TAA AGGCCGG TTTAAAGACTATTTA LSA0128 119225 - 121045 + | peptide ABC transporter permease/transmembrane protein TERM 192 121054 - 121089 + F 100 -17 -5.15969 | opp_overlap 121054, overlap 121076 AGAATAAATAAAAAA GGCCTGTTAAGCGC AGTTCAAA GCGCTTGACAGGCC TTTTTTGGATTGGAA TERM 193 121089 - 121054 - f 100 -14.8 -5.82036 | opp_overlap 121054 121076 AGAATAAATAAAAAA GGCCTGTTAAGCGC AGTTCAAA GCGCTTGACAGGCC TTTTTTGGATTGGAA TERM 194 121784 - 121756 - g 90 -11.7 -3.73106 | opp_overlap 121756 TTAAAACCGGAAGAA GCTGCCAACGGCT TTA AGACGTTGCCAGC AATGCGCCCTGATCA uxaC 121228 - 122643 + | glucuronate isomerase TERM 195 122682 - 122655 - f 80 -10.7 -3.45088 | gap 1, opp_overlap 122655, overlap 122658 TTAAAATAAATGGAA GAAGCCTGCGAT GAATT ATCGC-GGCTTC TTTTTTATATTCAGC TERM 196 122655 - 122682 + F 100 -11.4 -5.47159 | gap 1, opp_overlap 122655 122658 TTAAAATAAATGGAA GAAGCCTGCGATG AAT TATCGC-GGCTTC TTTTTTATATTCAGC TERM 197 122827 - 122777 - g 72 -7.8 -3.75378 | opp_overlap 122777, overlap 122763 AGGCTGATAAGACAA CCGTCACGATTCGA-ACGATTGCA CAACT TGCAAACGTCTCGCAT-ATGACGG TTTCACGAGCACTGA TERM 198 122870 - 122849 - g 71 -9.5 -2.92668 | gap 1 GAGCACTGAATGATA GTGAGCTGGT AAA ACCAGC-CAC GAAGGAGAAAATTTT LSA0130 122755 - 123780 + | LacI family transcriptional regulator TERM 199 123778 - 123828 + T 100 -20.8 -4.11751 | opp_overlap 123781 123786, overlap 123781 123786 AATTTATATCAACAC TAATAAAAGAAGCGCTGAAAACCA AAT TGGTCTTCAGCGCTTCTTTTGATA TTTTAAAGGGTTAAT TERM 200 123781 - 123825 + T 100 -22.5 -2.78776 | opp_overlap 123781 123786, overlap 123778 123786 TTATATCAACACTAA TAAAAGAAGCGCTGAAAACCA AAT TGGTCTTCAGCGCTTCTTTTG ATATTTTAAAGGGTT TERM 201 123825 - 123781 - T 100 -22.5 -3.40907 | opp_overlap 123781 123778 123786, overlap 123786 TTATATCAACACTAA TAAAAGAAGCGCTGAAAACCA AAT TGGTCTTCAGCGCTTCTTTTG ATATTTTAAAGGGTT TERM 202 123786 - 123820 + T 100 -20.2 -4.55826 | opp_overlap 123786 123781, overlap 123781 123778 TCAACACTAATAAAA GAAGCGCTGAAAACCA AAT TGGTCTTCAGCGCTTC TTTTGATATTTTAAA TERM 203 123820 - 123786 - T 100 -22.4 -4.78753 | opp_overlap 123781 123778 123786, overlap 123781 TCAACACTAATAAAA GAAGCGCTGAAAACCA AAT TGGTCTTCAGCGCTTC TTTTGATATTTTAAA gpm2 124487 - 123831 - | phosphoglycerate mutase LSA0132 124702 - 125160 + | MarR family transcriptional regulator TERM 204 125364 - 125331 - T 100 -9.1 -5.26875 | opp_overlap 125331 CGGTTAACTAAAAAA TGATAATGATGGT TGAAAAAC ACCATCATTACCA TTTTTCTGTTAATCC TERM 205 125331 - 125364 + T 90 -6.9 -5.1244 | opp_overlap 125331 CGGTTAACTAAAAAA TGATAATGATGGT TGAAAAAC ACCATCATTACCA TTTTTCTGTTAATCC TERM 206 125482 - 125452 - T 100 -12.8 -4.74103 | opp_overlap 125452 CGCTTAATCTAAAAA TCCCATTAATCC TAAAACC GGATTAATGGGA TTTTTGTATTAATGC TERM 207 125452 - 125482 + T 100 -12.8 -5.1244 | opp_overlap 125452 CGCTTAATCTAAAAA TCCCATTAATCC TAAAACC GGATTAATGGGA TTTTTGTATTAATGC pepR 126428 - 125526 - | prolyl aminopeptidase LSA0134 128340 - 126502 - | putative Na(+)/H(+) antiporter TERM 208 126533 - 126543 + g 91 -6.8 -5.45652 | AATTGCTGTCTAATC GCTG GTA CAGC TTTTTTGTTACCGGT TERM 209 127859 - 127894 + g 72 -6.2 -4.4078 | overlap 127860 AACACCGCAATCAAG AGAATTGTTTGGCCGA GTGG TTGGCTAAGCAGTTCC TTTTCCTTGAGCGCG TERM 210 127860 - 127893 + g 76 -9.7 -3.24146 | overlap 127859 ACACCGCAATCAAGA GAATTGTTTGGCCGA GTGG TTGGCTAAGCAGTTC CTTTTCCTTGAGCGC LSA0135 128477 - 128884 + | integral membrane protein, CcrB LSA0136 128881 - 129228 + | integral membrane protein, CcrB TERM 211 129480 - 129439 - g 77 -3.8 -5.11112 | AAATCGGAAGAAAAA GAAATTAACGAGAACTTC TTCAAC GACGTTCGCCTTAACTTC AATAACGATTCCGCG TERM 212 131169 - 131155 - g 70 -5.6 -4.25848 | overlap 131168 AAGGGCTTATTAAAA GGTGGC CAA GCCATC GAAGCCTTCAACCGA LSA0137 129322 - 131613 + | DNA helicase superfamily protein I TERM 213 131624 - 131652 + F 100 -8.2 -5.82172 | opp_overlap 131624 AATAATACGACTAGA GGGACTCATCAA ATTGC TTGGTGAGTGCC TTTTTTTGTGTTAAT panK 131721 - 132650 + | pantothenate kinase guaA 132817 - 134370 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 214 134415 - 134386 - f 100 -19.5 -4.86621 | opp_overlap 134386 ATTCCCAATTAAAAA CACCGCAAGTTGT TTCG ACAACTTGCGGTG TTTTTTTGTGCAAGA TERM 215 134386 - 134415 + F 100 -19.5 -5.60993 | opp_overlap 134386 ATTCCCAATTAAAAA CACCGCAAGTTGT TTCG ACAACTTGCGGTG TTTTTTTGTGCAAGA TERM 216 135307 - 135317 + G 75 -5.4 -4.79826 | overlap 135310 CCTTAATTAACGGGG CGTT TGA AACG TTTTTAATGCTCTAT LSA0140 134511 - 135878 + | integral membrane protein TERM 217 135909 - 135891 - T 100 -7.3 -5.66684 | opp_overlap 135891 TAATGGATAAAAAAA CGGTCCC TAAAC GGGGCCG TTTTTTTTGTGGTTT TERM 218 135891 - 135909 + T 100 -9.5 -6.04378 | opp_overlap 135891 TAATGGATAAAAAAA CGGTCCC TAAAC GGGGCCG TTTTTTTTGTGGTTT tnpA1-ISLsa1 136900 - 135980 - | IS30 family transposase TERM 219 136701 - 136671 - G 74 -7.7 -3.91084 | gap 1 TGATTGGTAATTAAA GTCGCT-AATGCTG CCGT CAGCATCGAACGAC GACCGCAATTCCGCC TERM 220 136795 - 136818 + g 100 -13.2 -3.40639 | gap 1 AGCTAATCGTAGCTT TGGC-GACGCC TAA GGCGTCAGCCA TTACTTGGTAAGATT LSA0142 138399 - 137128 - | hypothetical protein LSA0143 139281 - 138418 - | putative adenine-specific DNA methyltransferase TERM 221 139470 - 139484 + r 73 -6.4 -4.28361 | overlap 139471 ATTACTTAATTTAAT TTTCGG AGG CCGAAG TTTTAGTCCCGTTCA tnpB1-IS1520 140362 - 139565 - | IS3 family transposase tnpA1-IS1520 140634 - 140383 - | IS3 family transposase TERM 222 141029 - 141046 + G 79 -8.5 -4.07885 | opp_overlap 141026 TTTATACAAGACTTA TTCGATC TGCG GATCGAA TTTTAAAAAAAGATG LSA0146 140791 - 141576 + | putative adenine-specifique DNA methyltransferase TERM 223 141609 - 141590 - f 80 -10.8 -3.15212 | opp_overlap 141590 AATTATTATATTTAA TGGCTAGA TTAA TCTAGCCA TTTTTTTGCTTAAAA TERM 224 141590 - 141609 + F 100 -10.8 -5.63103 | opp_overlap 141590 AATTATTATATTTAA TGGCTAGA TTAA TCTAGCCA TTTTTTTGCTTAAAA LSA0147 142108 - 143862 + | putative DNA-repair helicase LSA0148 144009 - 146051 + | putative DNA-repair ATPase LSA0149 146044 - 146589 + | hypothetical protein TERM 225 146750 - 146781 + F 100 -16.2 -4.7629 | opp_overlap 146754, overlap 146754 TGCCGTTAATATTTA GAAACCACAATTTA AATC TAAATTGTGGTTTC TTTTTGCATTCATAG TERM 226 146754 - 146777 + F 100 -11.2 -4.91473 | opp_overlap 146754, overlap 146750 GTTAATATTTAGAAA CCACAATTTA AATC TAAATTGTGG TTTCTTTTTGCATTC TERM 227 146777 - 146754 - f 89 -11.2 -3.9777 | opp_overlap 146750 146754 GTTAATATTTAGAAA CCACAATTTA AATC TAAATTGTGG TTTCTTTTTGCATTC LSA0150 146840 - 147691 + | putative deacetylase (acetyl esterase) LSA0151 147688 - 148206 + | hypothetical protein TERM 228 148426 - 148387 - T 100 -8.9 -5.7946 | gap 1, opp_overlap 148387 CTTTTAACAAAAAAA GTCTGTCATAAATTTAGT GGGAT ACTAAATG-ATGACAGAC TTTTTTTAATAGGTT TERM 229 148387 - 148426 + T 100 -9.6 -5.54894 | gap 1, opp_overlap 148387 CTTTTAACAAAAAAA GTCTGTCATAAATTTAGTG GGA TACTAAATG-ATGACAGAC TTTTTTTAATAGGTT LSA0152 149178 - 148432 - | integral membrane protein LSA0153 149543 - 149220 - | hypothetical protein LSA0154 149746 - 149540 - | XRE family DNA-binding protein TERM 230 149804 - 149818 + H 70 -2.8 -5.08255 | overlap 149805 AATTGTAATGAGTTG ATGACA TTT TGTCAA TTTTATTTTGAAAGT LSA0155 149914 - 150567 + | haloacid dehalogenase-like family hydrolase TERM 231 150622 - 150572 - T 100 -22.2 -4.01381 | opp_overlap 150572 150577, overlap 150577 ATTTAATTTAAACAA TAAAAGAACCGTCTTGAATGCCAA TAT TAGGCACGCAAGACGGTTCTTTTA TTTATTTAACATAAT TERM 232 150572 - 150622 + T 100 -20 -4.44448 | opp_overlap 150572 150577, overlap 150577 ATTTAATTTAAACAA TAAAAGAACCGTCTTGAATGCCAA TAT TAGGCACGCAAGACGGTTCTTTTA TTTATTTAACATAAT TERM 233 150617 - 150577 - T 100 -17.7 -5.011 | opp_overlap 150577 150572, overlap 150572 ATTTAAACAATAAAA GAACCGTCTTGAATGCCAA TAT TAGGCACGCAAGACGGTTC TTTTATTTATTTAAC TERM 234 150577 - 150617 + T 100 -15.5 -5.18866 | opp_overlap 150572 150577, overlap 150572 ATTTAAACAATAAAA GAACCGTCTTGAATGCCAA TAT TAGGCACGCAAGACGGTTC TTTTATTTATTTAAC LSA0156 151915 - 150620 - | hypothetical protein TERM 235 151435 - 151459 + g 81 -4.3 -5.40072 | overlap 151456 151458 GCGCCGCGGGACGGG GGTGGTCAATT AAA ATTTGATCATC TTTTTTTAAAGAAAA LSA0157 153264 - 151939 - | putative hydroxyl/aromatic amino acid symporter LSA0158 153400 - 153311 - | hypothetical protein LSA0159 153561 - 154238 + | hypothetical protein TERM 236 154280 - 154242 - T 100 -15.5 -3.56226 | opp_overlap 154247, overlap 154247 AATCAGTCATAAATA CAAAATAGCGCCACCGA TATTT TCGGTGACGCTATTTTT AACATTATACTTTTT TERM 237 154247 - 154275 + T 100 -13.2 -4.6902 | opp_overlap 154242 154247 GTCATAAATACAAAA TAGCGCCACCGA TATTT TCGGTGACGCTA TTTTTAACATTATAC TERM 238 154275 - 154247 - T 100 -15.4 -4.84918 | opp_overlap 154247, overlap 154242 GTCATAAATACAAAA TAGCGCCACCGA TATTT TCGGTGACGCTA TTTTTAACATTATAC LSA0160 155211 - 154294 - | hypothetical protein TERM 239 154868 - 154879 + g 75 -5.8 -4.62783 | GGACTGTTTTCGGTT TGCG GTGT CGCA TTTTTAGCGTACATA LSA0161 155556 - 155224 - | ArsR family transcriptional regulator TERM 240 155653 - 155679 + r 100 -10.8 -4.87786 | opp_overlap 155653 GCAATTCACACAAAA CCCCCACTAGGT TGG ACCTAGCAGGGG TTTTTATAGCATTAA TERM 241 155679 - 155653 - R 100 -15.2 -4.57474 | opp_overlap 155653 GCAATTCACACAAAA CCCCCACTAGGT TGG ACCTAGCAGGGG TTTTTATAGCATTAA LSA0162 157391 - 155691 - | bifunctional glycosyl transferase family protein TERM 242 156522 - 156557 + g 82 -3.4 -5.52384 | gap 1, opp_overlap 156522 CAAGGGTTCAATAAA GGCAGCATTAACAGCTG AGA CAA-TGTTAATACTGTC TTTTTTTAATGCGCC LSA0163 157562 - 157816 + | hypothetical protein LSA0164 157869 - 158657 + | putative serine/tyrosine protein phosphatase TERM 243 159499 - 159516 + G 70 -9.9 -2.52464 | GTCTATGTATTTTTA GCTAGCA ATGC TGCTAGC TACATTACCGGACAG LSA0165 158677 - 159567 + | oxidoreductase LSA0166 159710 - 159961 + | integral membrane protein LSA0167 159980 - 160537 + | hypothetical protein LSA0168 160548 - 160742 + | hypothetical protein LSA0169 160758 - 161186 + | putative general stress protein LSA0170 161213 - 161674 + | putative general stress protein TERM 244 161704 - 161679 - T 100 -13.4 -5.57396 | opp_overlap 161679 ATAACGAATAAAAAA TAGGTGGTCC TCAATG GGACCACCTA TTTTTTTGTGCTCGG TERM 245 161679 - 161704 + T 100 -14.1 -5.67063 | opp_overlap 161679 ATAACGAATAAAAAA TAGGTGGTCCT CAAT GGGACCACCTA TTTTTTTGTGCTCGG katA 163161 - 161722 - | catalase TERM 246 162850 - 162836 - G 70 -7.8 -3.61536 | opp_overlap 162836 AATTTAACGGCGAAA CCACGA ACA TCGCGG TATGTATCGGGATAG TERM 247 163414 - 163444 + H 100 -17 -5.95449 | opp_overlap 163414 GACAAGAATAAAAAA GGAGTGCCGAGT AGTTATC ACTCGGCACTCC TTTTTTATTTTATTT TERM 248 163444 - 163414 - H 100 -17.7 -5.68489 | opp_overlap 163414 GACAAGAATAAAAAA GGAGTGCCGAGTA GTTAT CACTCGGCACTCC TTTTTTATTTTATTT TERM 249 163639 - 163656 + H 82 -7.7 -4.36433 | overlap 163641 TGACACTCTCTGTTG TGCCACC TAAA GGTGGTA TTTATTGGTCTTTCG TERM 250 163641 - 163654 + H 74 -8.1 -3.77071 | overlap 163639 ACACTCTCTGTTGTG CCACC TAAA GGTGG TATTTATTGGTCTTT TERM 251 164776 - 164738 - g 84 -11.3 -3.23274 | opp_overlap 164734, overlap 164733 TGGTTGATAACCCAA CATCAAAAGTATTAGCA ATTAA TCCCAATACTTTTGATG ACGGTATTCCTAATT TERM 252 167320 - 167308 - g 70 -2.6 -5.00412 | AAAGACAATCAAAAA CAGC CATAC GCCG TCAGCGTTGAGGATT LSA0172 163840 - 167751 + | cell surface protein precursor LSA0173 167771 - 168550 + | cell surface protein precursor LSA0174 168544 - 168816 + | hypothetical protein TERM 253 169559 - 169549 - gf 82 -3.2 -5.44119 | TGGATTTGAAAAAAA TGCA TAT CGCA CCGAATTCGAGTTTC TERM 254 169761 - 169740 - gf 75 -2.3 -5.31275 | overlap 169741 GCCTATCAGAAAAAA CGACAATTA ACCA TCATTGTCA TTAGCGTGTGTGTCG LSA0175 168813 - 169841 + | cell surface protein precursor LSA0176 169813 - 169989 + | hypothetical protein TERM 255 170136 - 170122 - f 76 -3.5 -5.36441 | overlap 170123 GTGTTATATAAAAAA CGTGC ACAAA GCACA AATTAAACCTAGGGA LSA0177 170162 - 171046 + | cell surface protein precursor TERM 256 171087 - 171066 - f 100 -13.1 -4.96848 | opp_overlap 171066 GTTTGTATACAAAAA GGATTCTGG TTAT CCAGAATCC TTTTTTAGCAGAATA TERM 257 171066 - 171087 + F 100 -13.1 -5.0133 | opp_overlap 171066 GTTTGTATACAAAAA GGATTCTGG TTAT CCAGAATCC TTTTTTAGCAGAATA LSA0178 171157 - 171573 + | MarR family transcriptional regulator TERM 258 171618 - 171587 - T 100 -16.1 -6.17669 | opp_overlap 171587 AAGAAAATAAAAAAA TGAGCTTCAGACA GTAATT TGTCTGAAGCTCA TTTTTATTTAACAAT TERM 259 171587 - 171618 + T 100 -16.8 -5.27938 | opp_overlap 171587 AAGAAAATAAAAAAA TGAGCTTCAGACAG TAAT TTGTCTGAAGCTCA TTTTTATTTAACAAT pepD1 173039 - 171633 - | U34 family dipeptidase D TERM 260 172706 - 172729 + g 73 -8.2 -3.65135 | overlap 172702 CGGCAACGAGTGGGT CTAATCCTTG AATA CGAGGGTTAG TTGTAATTGTTTCGG mtsC 173256 - 173996 + | manganese ABC transporter, ATP-binding subunit TERM 261 174799 - 174811 + G 71 -4.8 -4.62336 | TTCGTTTATCTGCGC GCCT AAACA AGGC TTTTTGAAATGGCGT mtsB 173993 - 174853 + | manganese ABC transporter, membrane-spanning subunit mtsA 174850 - 175794 + | manganese ABC transporter, substrate-binding lipoprotein precursor LSA0183 175881 - 176387 + | isochorismatase/nicotamidase family hydrolase TERM 262 176415 - 176394 - f 100 -13.1 -5.10208 | opp_overlap 176394 GAAGGCTAATAAAAA GGGTTTCTC TTTC GAGAAACCC TTTTTATTTTGGCAA TERM 263 176394 - 176415 + F 100 -13.1 -5.45802 | opp_overlap 176394 GAAGGCTAATAAAAA GGGTTTCTC TTTC GAGAAACCC TTTTTATTTTGGCAA LSA0184 176596 - 176835 + | hypothetical protein galP 176864 - 178279 + | galactose:cation symporter TERM 264 178359 - 178325 - f 70 -8.6 -2.96692 | opp_overlap 178325 178336, overlap 178345 GAGGATTAGCATAGA TTGGTGAATGAGCGCT GAA AGCGATTGTTCACCAA TTGTCGCTAAACGTA TERM 265 178325 - 178359 + F 93 -13 -3.35996 | opp_overlap 178325 178345, overlap 178336 GAGGATTAGCATAGA TTGGTGAATGAGCGCT GAA AGCGATTGTTCACCAA TTGTCGCTAAACGTA TERM 266 178456 - 178474 + F 78 -9.6 -3.60627 | opp_overlap 178459, overlap 178459 GCTGAGTGTTGTGAA TAACCAGC ATG GCTGGTTG TTTGCAATACGGTGC TERM 267 178471 - 178459 - f 75 -9.1 -3.61715 | opp_overlap 178456 178459 GAGTGTTGTGAATAA CCAGC ATG GCTGG TTGTTTGCAATACGG TERM 268 178459 - 178471 + F 80 -9.1 -3.9392 | opp_overlap 178459, overlap 178456 GAGTGTTGTGAATAA CCAGC ATG GCTGG TTGTTTGCAATACGG TERM 269 178562 - 178537 - f 100 -8.4 -5.85425 | gap 1, opp_overlap 178537 TAAACAAACAAAAAA GTTCCCATCCT TAATC AGG-TGGGAAC TTTTTTGAATGCTGA TERM 270 178537 - 178562 + F 100 -8.4 -5.1101 | gap 1, opp_overlap 178537 TAAACAAACAAAAAA GTTCCCATCCT TAATC AGG-TGGGAAC TTTTTTGAATGCTGA TERM 271 179230 - 179199 - g 82 -5.9 -4.96646 | gap 2 GCAGACAATCAAAAA GGGCC-GC-CACCAT TTAA ATGGCAAGCAGGCCC TAGTTTATACACGGA LSA0186 178687 - 179700 + | LytR family transcriptional regulator LSA0187 181216 - 179705 - | putative drug-resistance ABC transporter, two ATP-binding subunits TERM 272 181295 - 181278 - H 85 -4.1 -5.64274 | opp_overlap 181278 GCATGCACAAAAAAA GACGC TACTGAGG GCGTC TGTTAACAAGTCTGG TERM 273 181392 - 181364 - H 81 -9 -4.11884 | gap 1, opp_overlap 181369 181370, overlap 181368 AACGACAATCAGAAA TAAACGGTCCCCA AACG TGGGG-CCATTTA GTACCAATCGAGTTG TERM 274 181388 - 181368 - H 73 -5.4 -4.63526 | gap 1, opp_overlap 181369 181370, overlap 181364 ACAATCAGAAATAAA CGGTCCCCA AACG TGGGG-CCA TTTAGTACCAATCGA TERM 275 181713 - 181678 - H 100 -15.6 -4.23707 | gap 1, opp_overlap 181684 ATAAACCTTAATAAA CTGGAAGATGACT-GGG TAA CCCGAGTCATCTTCCTG GTGGAGCTCACTAGT TERM 276 181684 - 181707 + H 79 -10.4 -3.21416 | gap 1, opp_overlap 181678 CTTAATAAACTGGAA GATGACT-GGG TAA CCCGAGTCATC TTCCTGGTGGAGCTC TERM 277 181716 - 181745 + H 100 -17.3 -5.95946 | AGTCATCTTCCTGGT GGAGCTCACTAGT GAAG ACTAGTGGGCTCC TTTTTTTGTTATTAG LSA0189 181932 - 183323 + | putative amino acid/polyamine transport protein LSA0190 183391 - 184479 + | integral membrane protein LSA0191 184479 - 185222 + | integral membrane protein LSA0192 185293 - 185421 + | hypothetical protein TERM 278 185501 - 185444 - f 86 -10.1 -4.29049 | opp_overlap 185446 185452, overlap 185435 185445 185452 GAATTATCAAAATAA TTTTAAAAGACCATCTGAAACCGACTT GTAA AAGTGGCTTTCGGATGGTCTTTTAATT TGGCATAAATCCGAT TERM 279 185500 - 185445 - f 100 -13.6 -3.16345 | opp_overlap 185446 185452, overlap 185435 185444 185452 AATTATCAAAATAAT TTTAAAAGACCATCTGAAACCGACTT GTAA AAGTGGCTTTCGGATGGTCTTTTAAT TTGGCATAAATCCGA TERM 280 185446 - 185499 + F 100 -19.3 -3.61178 | opp_overlap 185435 185445 185444 185452, overlap 185452 ATTATCAAAATAATT TTAAAAGACCATCTGAAACCGACTT GTAA AAGTGGCTTTCGGATGGTCTTTTAA TTTGGCATAAATCCG TERM 281 185493 - 185452 - f 91 -11.7 -4.26634 | opp_overlap 185452 185446, overlap 185445 185444 AAAATAATTTTAAAA GACCATCTGAAACCGACTT GTAA AAGTGGCTTTCGGATGGTC TTTTAATTTGGCATA TERM 282 185452 - 185493 + F 100 -13.9 -4.55798 | opp_overlap 185445 185444 185452, overlap 185446 AAAATAATTTTAAAA GACCATCTGAAACCGACTT GTAA AAGTGGCTTTCGGATGGTC TTTTAATTTGGCATA LSA0193 185609 - 186169 + | hypothetical protein TERM 283 186213 - 186194 - T 100 -7.9 -5.52986 | opp_overlap 186194 AGTGCATCAAAAAAA CCGCTAA AATTAA TTAGCGG TTTTTTATTTACGAT TERM 284 186194 - 186213 + T 100 -7.9 -5.64421 | opp_overlap 186194 AGTGCATCAAAAAAA CCGCTAA AATTAA TTAGCGG TTTTTTATTTACGAT LSA0194 187585 - 186239 - | cell surface protein precursor TERM 285 186367 - 186351 - G 71 -9.5 -2.91912 | CCACCGATGTAGATA GCATCAT GGT ATGATGC ACCAGCGCCACCCCA TERM 286 187817 - 187848 + r 100 -17.6 -4.19624 | opp_overlap 187817 TATTTTACTAAAAAA TAGAGGCTATTGAA ATAT TTCAATAGCCTCTA TTTATGTTACAGCTA TERM 287 187848 - 187817 - R 100 -17.6 -5.15634 | opp_overlap 187817 TATTTTACTAAAAAA TAGAGGCTATTGAA ATAT TTCAATAGCCTCTA TTTATGTTACAGCTA LSA0195 188863 - 187871 - | lipoprotein precursor TERM 288 188322 - 188371 + g 70 -8 -3.65314 | gap 1, opp_overlap 188356, overlap 188328 AAAGTGGCGGGAATT GCCGT-GTGGTCGCTGTTGGTAA AGAGG TTATCAACAGCGGTCATTGCTGC TTGTTGGGCCTTAGC TERM 289 188328 - 188364 + g 100 -13.2 -3.33171 | opp_overlap 188356, overlap 188322 GCGGGAATTGCCGTG TGGTCGCTGTTGGTAA AGAGG TTATCAACAGCGGTCA TTGCTGCTTGTTGGG TERM 290 188382 - 188404 + g 86 -7 -5.07053 | GCTGCTTGTTGGGCC TTAGCCTCTT TAT AGGCGGCTAA TTTTTTGGCATCATT TERM 291 188566 - 188580 + g 100 -10 -5.01811 | TTAAATCTTTTTGAG CCGCTT TAA AAGCGG TTTTTGATTTACTGG TERM 292 188770 - 188787 + g 80 -6.2 -4.77165 | CCTCAGTCTTAGTTG CGGCGG CAGGGA CCGTCG TTTTATTCTGACAAC TERM 293 190063 - 190041 - g 70 -3.5 -4.80729 | gap 1, overlap 190034 AAACAGAACACAAAA TGCGCATATC TTAC AAT-TGCGCA ACGATGTGCCTAAAG pepD2 189082 - 190500 + | U34 family dipeptidase D TERM 294 190513 - 190546 + F 100 -14.1 -5.44119 | opp_overlap 190512 190513 190520 TAATAGGTTTGAAAG GAGTGAACTACTAAC GATA GTTAGTAGTTTGCTC TTTTTTTACAATAAC TERM 295 190546 - 190513 - f 74 -9.7 -2.74248 | opp_overlap 190513, overlap 190512 190520 TAATAGGTTTGAAAG GAGTGAACTACTAAC GATA GTTAGTAGTTTGCTC TTTTTTTACAATAAC TERM 296 190539 - 190520 - f 75 -9.4 -3.1634 | opp_overlap 190513, overlap 190513 190512 TTTGAAAGGAGTGAA CTACTAAC GATA GTTAGTAG TTTGCTCTTTTTTTA LSA0197 190786 - 191328 + | MarR family transcriptional regulator TERM 297 191383 - 191334 - f 74 -5 -4.78326 | opp_overlap 191341, overlap 191341 TGCCAAATAAATAAA TCAAAAGGGACCCTTCGCCAAA TTCATT TTTGGTGGCGGGTCCTTTTTTA GGTGTTATTAAATCA TERM 298 191341 - 191376 + F 100 -11.9 -5.17054 | opp_overlap 191334 191341 TAAATAAATCAAAAG GGACCCTTCGCCAAA TTCATT TTTGGTGGCGGGTCC TTTTTTAGGTGTTAT ack1 191473 - 192657 + | acetate kinase (acetokinase) LSA0199 192672 - 192917 + | hypothetical protein TERM 299 192928 - 192960 + F 83 -2.1 -5.88197 | AATAAATTTAAAAAA GATTAATTGGGTG GAAACGG TGCCTGATTAATC TTTTTTTATGTTTAG TERM 300 193810 - 193825 + G 75 -3.2 -5.18371 | overlap 193811 CACAACCATCTGTCA ACGGTT TAGC AACCGG TTTTGTTTTATCACA rbsU 193092 - 193976 + | ribose transporter rbsD 193997 - 194392 + | D-ribose pyranase rbsK 194412 - 195320 + | ribokinase TERM 301 195333 - 195359 + F 78 -6.5 -4.68593 | TAATAGATTAAAGGG CGCTCATGGCT TAGTC GGCTGTGGGCG TTTTTAAATGATAGC rbsR 195385 - 196407 + | ribose operon transcriptional regulator TERM 302 196478 - 196430 - f 80 -6.8 -4.81685 | gap 2, opp_overlap 196431 196433, overlap 196431 196433 ATTAAGGACCAAAAA GTACGGGCGACACTAGGCTTGGCA ATT TGCCAA-CCGAATGTAGGCCGT-C TTTTTTTGTGCTTTA TERM 303 196431 - 196478 + F 88 -4.8 -5.75599 | gap 1, opp_overlap 196430 196431 196433, overlap 196433 TTAAGGACCAAAAAG TACGGGCGACACTAGGCTTGGCA ATT TGCCAA-CCGAATGTAGGCCGTC TTTTTTTGTGCTTTA TERM 304 196433 - 196476 + F 79 -7.4 -4.48967 | gap 1, opp_overlap 196430 196431 196433, overlap 196431 AAGGACCAAAAAGTA CGGGCGACACTAGGCTTGGCA ATT TGCCAA-CCGAATGTAGGCCG TCTTTTTTTGTGCTT TERM 305 196476 - 196433 - f 76 -9.6 -3.30145 | gap 1, opp_overlap 196433 196431, overlap 196430 196431 AAGGACCAAAAAGTA CGGGCGACACTAGGCTTGGCA ATT TGCCAA-CCGAATGTAGGCCG TCTTTTTTTGTGCTT LSA0204 196551 - 197105 + | PadR family transcriptional regulator TERM 306 197124 - 197112 - g 93 -4.1 -5.79588 | GTAAAATGAAAAAAA CAACA AAT CGTTG GATAGCGCTGGTCGC TERM 307 197675 - 197661 - g 73 -5.7 -4.46233 | overlap 197663 GGAATGTTAAAGAAA CACCA GCATA TGGTG CAGGCGAATCAATCG LSA0205 197102 - 198661 + | putative drug:H(+) antiporter TERM 308 199061 - 199051 - g 79 -6.8 -4.68655 | CAAGGCCAAAACAAA GCTG AAG CAGC TGAAAAATGGGGCGA gpm3 198757 - 199446 + | phosphoglycerate mutase TERM 309 199519 - 199481 - f 100 -16.3 -4.17657 | opp_overlap 199481 199484, overlap 199484 GAGTATAGTGTAAAA TAAGCGCCTATCATC TGAACTTTT GATGATAGGCGCTTA TTTGTAACTAGACGG TERM 310 199481 - 199519 + F 100 -18.4 -3.91897 | opp_overlap 199481 199484, overlap 199484 GAGTATAGTGTAAAA TAAGCGCCTATCATCTGA ACT TTTGATGATAGGCGCTTA TTTGTAACTAGACGG TERM 311 199516 - 199484 - f 100 -13.6 -4.20817 | opp_overlap 199484 199481, overlap 199481 TATAGTGTAAAATAA GCGCCTATCATC TGAACTTTT GATGATAGGCGC TTATTTGTAACTAGA TERM 312 199484 - 199516 + F 100 -15.7 -4.09117 | opp_overlap 199481 199484, overlap 199481 TATAGTGTAAAATAA GCGCCTATCATCTGA ACT TTTGATGATAGGCGC TTATTTGTAACTAGA TERM 313 199573 - 199600 + F 100 -11.4 -5.63103 | opp_overlap 199573 TTTAGCTTACTCAAA TAGGTTAGTCCC GCAG GGGATTAGCCTA TTTTTTTGCTTAAAA TERM 314 201622 - 201594 - g 75 -8.3 -3.78124 | opp_overlap 201593 ATGAACGACCAAGAA GATGCTAAGTTAT TAG ATAAGTTAGCACC ATACTTCAGACCAGA clpL 199842 - 201965 + | ATPase/chaperone ClpL, putative specificity factor for ClpP protease LSA0208 202006 - 202542 + | integral membrane protein TERM 315 202559 - 202606 + T 100 -27.4 -3.15056 | opp_overlap 202564, overlap 202564 CGCATGTAAATATTG AAAAAGGCCCCTCATACTGGTT GCTC AACCAGTATGAGGGGCCTTTTG TATTGGATTACAGGT TERM 316 202601 - 202564 - T 100 -27.3 -4.77986 | opp_overlap 202559 202564 GTAAATATTGAAAAA GGCCCCTCATACTGGTT GCTC AACCAGTATGAGGGGCC TTTTGTATTGGATTA TERM 317 202564 - 202601 + T 100 -27.3 -4.7033 | opp_overlap 202564, overlap 202559 GTAAATATTGAAAAA GGCCCCTCATACTGGTT GCTC AACCAGTATGAGGGGCC TTTTGTATTGGATTA LSA0209 203231 - 202614 - | integral membrane protein TERM 318 203457 - 203468 + G 71 -3 -5.00616 | CACTTATTCAACCGT TGAT GGAC ATCA TTTTTTAGCAAGAAC LSA0210 203428 - 204420 + | choloylglycine hydrolase (bile salt hydrolase) TERM 319 204467 - 204428 - f 85 -7.3 -4.93547 | opp_overlap 204435 204436, overlap 204436 TTAACTAACTAAAAA TAACCAAACCGTTATCC ATTTTG GGATAACGGCTTTTTTA TGTGTCTAGCTGATG TERM 320 204435 - 204460 + F 100 -7.6 -5.4492 | opp_overlap 204428 204436, overlap 204436 ACTAAAAATAACCAA ACCGTTATCC ATTTTG GGATAACGGC TTTTTTATGTGTCTA TERM 321 204436 - 204459 + F 89 -11.1 -3.85325 | opp_overlap 204428 204436, overlap 204435 CTAAAAATAACCAAA CCGTTATCC ATTTTG GGATAACGG CTTTTTTATGTGTCT TERM 322 204459 - 204436 - f 90 -11.1 -4.25754 | opp_overlap 204436 204435, overlap 204428 CTAAAAATAACCAAA CCGTTATCC ATTTTG GGATAACGG CTTTTTTATGTGTCT TERM 323 204527 - 204510 - f 73 -5.7 -4.56597 | opp_overlap 204510 GGTTTTTTTCAAAAA TTCAAAT TGGC ATTTGAA TTTTAAACAATAATT TERM 324 204887 - 204866 - gf 76 -5.8 -4.62336 | ACGTCAGGTGAAAAA GCGACGCT ACTTGA AGCACCGC AGACTAAAAAACTAG LSA0211 204683 - 205147 + | cell surface protein precursor LSA0212 204946 - 208080 + | cell surface protein precursor LSA0213 208154 - 209191 + | cell surface protein precursor TERM 325 209244 - 209229 - g 70 -5.4 -4.56775 | gap 1, opp_overlap 209219 209230, overlap 209217 209230 ATGGGGCCCTAAAAA GGCTCGC TTG GCGA-CC TTCATCGTATCAGGG LSA0214 209194 - 209346 + | hypothetical protein LSA0215 209408 - 210391 + | cell surface protein precursor TERM 326 210437 - 210392 - f 85 -9.9 -3.95071 | opp_overlap 210409 210433 210435, overlap 210393 210395 GAAACTGGTAAATAA GTATTTAGGTGCAACGAGCTA ATAT TAGCTCGTTACACATACATAG ATGAATTAAATTCAT TERM 327 210436 - 210393 - f 93 -13.4 -2.9632 | opp_overlap 210409 210433 210435, overlap 210392 210395 AAACTGGTAAATAAG TATTTAGGTGCAACGAGCTA ATAT TAGCTCGTTACACATACATA GATGAATTAAATTCA TERM 328 210434 - 210395 - f 83 -11.6 -3.02639 | opp_overlap 210409 210433, overlap 210393 210392 ACTGGTAAATAAGTA TTTAGGTGCAACGAGCTA ATAT TAGCTCGTTACACATACA TAGATGAATTAAATT TERM 329 210790 - 210767 - g 100 -13.2 -3.40639 | gap 1 AATCTTACCAAGTAA TGGCTGACGCC TTA GGCGTC-GCCA AAGCTACGATTAGCT TERM 330 210884 - 210914 + G 74 -7.7 -3.91084 | gap 1 GGCGGAATTGCGGTC GTCGTTCGATGCTG ACGG CAGCATT-AGCGAC TTTAATTACCAATCA tnpA2-ISLsa1 210685 - 211605 + | IS30 family transposase LSA0216_b 211637 - 211906 + | MarR family transcriptional regulator, truncated TERM 331 211921 - 211948 + F 100 -9.9 -5.44721 | opp_overlap 211921 211924 AGAATAGACTGGAAA TAGGCGACTGC GAAATA GCGGTCGCTTA TTTTTTTGGACTAAT LSA0217 212040 - 212696 + | thiosulfate sulfurtransferase trxA1 212784 - 213101 + | thioredoxin TERM 332 213147 - 213117 - f 100 -12.6 -4.7889 | opp_overlap 213117 ATAAACATTTAAAAA GGATGACGGCGAAG GTA CTTTGCTGTCATCC TTTTTTATTTAGTAG TERM 333 213117 - 213147 + F 100 -17 -5.68438 | opp_overlap 213117 ATAAACATTTAAAAA GGATGACGGCGAAG GTA CTTTGCTGTCATCC TTTTTTATTTAGTAG LSA0219_a 213407 - 213964 + | XRE family DNA-binding protein TERM 334 214003 - 213970 - f 93 -12.1 -3.77639 | opp_overlap 213965 213970 GAACCTATAATATAA TATGCAATTATATAC TATA ATATATAATTGCATA TTTTGGAGGGTTCAT TERM 335 213970 - 214003 + F 91 -11.4 -4.11751 | opp_overlap 213970, overlap 213965 GAACCTATAATATAA TATGCAATTATATA CTATAA TATATAATTGCATA TTTTGGAGGGTTCAT LSA0219_b 214242 - 215201 + | putative cyanate transport protein TERM 336 215289 - 215342 + F 100 -9.7 -5.40072 | gap 1, overlap 215293 AAATAGTTAGTTGTC T-TTTCTAGGTGGCACATTGTCGATA TTT TATCGGCGATGTGCCGCCTAGTTTCA TTTTTTTAGGAAAAA TERM 337 215293 - 215337 + F 100 -25.3 -4.5187 | overlap 215289 AGTTAGTTGTCTTTT CTAGGTGGCACATTGTCGATA TTT TATCGGCGATGTGCCGCCTAG TTTCATTTTTTTAGG TERM 338 215381 - 215363 - f 100 -11 -5.0917 | opp_overlap 215370 TTAGGAAAAAATAAA CCACACCT TTT AGGTGCGG GAGTTAGAATTAGCT TERM 339 215460 - 215410 - f 74 -4.9 -4.77036 | opp_overlap 215410 CTTCAGCATTAAAAA TCCCTTTCGC-TATAGAGAATGGCT ACC AACCAAA-TCTAAAAGCGAAAGGGA TTTTTATCATGTCTC tnpA2-IS1520 215918 - 216169 + | IS3 family transposase tnpB2-IS1520 216190 - 216987 + | IS3 family transposase dapE 218332 - 217034 - | succinyl-diaminopimelate desuccinylase TERM 340 217082 - 217068 - G 72 -6.4 -4.28361 | overlap 217069 TGAACGGGACTAAAA CTTCGG CCT CCGAAA ATTAAATTAAGTAAT TERM 341 218436 - 218462 + r 95 -10.9 -4.64048 | opp_overlap 218438, overlap 218438 AAGTGCATATTGAAA AAGCCGTCACA GTTAA TGTGACGGCTC TTTGTTTGTCTGATC TERM 342 218460 - 218438 - R 100 -13.5 -4.70659 | opp_overlap 218436 218438 GTGCATATTGAAAAA GCCGTCACA GTTAA TGTGACGGC TCTTTGTTTGTCTGA TERM 343 218438 - 218460 + r 100 -13.5 -3.91983 | opp_overlap 218438, overlap 218436 GTGCATATTGAAAAA GCCGTCACA GTTAA TGTGACGGC TCTTTGTTTGTCTGA LSA0221 218780 - 218448 - | LysR family transcriptional regulator (C-terminal fragment), degenerate LSA0223 219335 - 218880 - | LysR family transcriptional regulator (N-terminal fragment), degenerate LSA0224 219458 - 220033 + | isoleucine patch superfamily acetyltransferase LSA0225 220035 - 220781 + | oxidoreductase TERM 344 220828 - 220858 + F 74 -9.8 -2.64616 | opp_overlap 220828 220837, overlap 220834 220837 GGATTAGCCTAAGCA GGCGAATAACCGAT GTA GTCGGTTATTTGAC TGATGTAGCTAAACG TERM 345 220834 - 220852 + F 74 -8.2 -3.70149 | opp_overlap 220828 220837, overlap 220828 220837 GCCTAAGCAGGCGAA TAACCGAT GTA GTCGGTTA TTTGACTGATGTAGC TERM 346 220937 - 220968 + F 100 -10.4 -5.16572 | opp_overlap 220937 AGAATTAATAAAAAA TCACCTTAATCT GTTTTTTA AGATTAAGGTGA TTTTTTAGATTAAGT TERM 347 220968 - 220937 - f 100 -10.4 -5.57396 | opp_overlap 220937 AGAATTAATAAAAAA TCACCTTAATCT GTTTTTTA AGATTAAGGTGA TTTTTTAGATTAAGT pepN 221085 - 223616 + | aminopeptidase N (lysyl-aminopeptidase-alanyl aminopeptidase) TERM 348 223669 - 223636 - f 86 -9.6 -4.26344 | opp_overlap 223636 ATAGCGTGATGAAAA GCCGCCCTAACAAA TATCGG TTTGTTGGGGTGGC TTTTTTGCGGGATAA TERM 349 223636 - 223669 + F 100 -14.7 -5.02074 | opp_overlap 223636 ATAGCGTGATGAAAA GCCGCCCTAACAAAT ATCG GTTTGTTGGGGTGGC TTTTTTGCGGGATAA TERM 350 224449 - 224471 + G 74 -6.2 -4.52589 | opp_overlap 224428, overlap 224430 TTACTAGCATTGTTA GTAGCAGTCG TTG CGATTGCCGC TTTTATCTGGCAAGA LSA0227 223777 - 225120 + | putative drug:H(+) antiporter LSA0228 225117 - 225716 + | hypothetical protein LSA0229 225731 - 225880 + | MerR family transcriptional regulator (N-terminal fragment), authentic frameshift LSA0230 225886 - 226131 + | MerR family transcriptional regulator (C-terminal fragment), authentic frameshift TERM 351 226140 - 226165 + F 100 -8.3 -5.47399 | opp_overlap 226140 TCAGTAATCACTGAA GTTGGGGCAGT TTAT ACTGTGCCAAC TTTTTTTAAAATTAA LSA0231 226281 - 226814 + | MarR family transcriptional regulator lmrA 226827 - 228578 + | multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits TERM 352 228740 - 228774 + F 100 -13.7 -5.80951 | opp_overlap 228740 AGGCTCTTTCAAAAA CAGAGTAGCGTCCGA ATCAA TTGGACACTACTCTG TTTTTTGTTTTAAGT TERM 353 228774 - 228740 - f 100 -13.7 -4.56775 | opp_overlap 228740 AGGCTCTTTCAAAAA CAGAGTAGCGTCCGA ATCAA TTGGACACTACTCTG TTTTTTGTTTTAAGT TERM 354 228964 - 228983 + G 84 -10 -3.89501 | CCTTTTTATTAATTG CGATGGGC TGGG GCCTATCG TTTATGCCAGTGTTC LSA0233 228861 - 229244 + | putative Na(+):H(+) antiporter (N-terminal fragment), authentic frameshift LSA0234 229241 - 230914 + | putative Na(+):H(+) antiporter (C-terminal fragment), authentic frameshift TERM 355 230961 - 230932 - T 100 -19.5 -4.31688 | opp_overlap 230932 AATAGTAACTCAAAA GAGCCGTTCAGAT TAAA ATCTGAACGGCTC TTTTTTTATAATTAT TERM 356 230932 - 230961 + T 100 -19.5 -5.73339 | opp_overlap 230932 AATAGTAACTCAAAA GAGCCGTTCAGAT TAAA ATCTGAACGGCTC TTTTTTTATAATTAT LSA0235 232667 - 230973 - | extracellular protein precursor LSA0236 232836 - 232708 - | hypothetical protein TERM 357 233225 - 233249 + G 100 -12.3 -3.66178 | overlap 233217 GGATACTTAGCCCAG CTGTTGAATGT ATC ACGTTCAACAG TTTCGAGTTGGGAAG LSA0237 233156 - 233911 + | XRE family DNA-binding protein TERM 358 233944 - 233961 + F 78 -9.9 -3.34787 | opp_overlap 233939 233938 GGTAAAAATGCTTGA CCTCAAG TCAG CTTGAGG TTGTAAAGTAGTCTT LSA0238 234003 - 234863 + | putative aldo/keto reductase (oxidoreductase) LSA0239 234885 - 235310 + | MerR family transcriptional regulator TERM 359 235318 - 235341 + T 100 -16.8 -5.06816 | opp_overlap 235318 ATAAGTAGTCAAAAA GAGGCGACCT TGAT AGGTCGCCTC TTTTTGTTAACAGAT TERM 360 235341 - 235318 - T 100 -16.8 -4.71382 | opp_overlap 235318 ATAAGTAGTCAAAAA GAGGCGACCT TGAT AGGTCGCCTC TTTTTGTTAACAGAT LSA0240 235883 - 235365 - | GNAT family N-acetyltransferase TERM 361 235909 - 235923 + r 76 -4.2 -5.2166 | opp_overlap 235909 CTTTATGGTTTAATA GGGC CGCTGTT GCCC TTTTTTGACTTGTTC LSA0241 236355 - 235903 - | MarR family transcriptional regulator TERM 362 236136 - 236154 + g 75 -6 -4.65895 | opp_overlap 236140, overlap 236123 CAGCTTGGCGGGTAA TTAACCCG GCA CGGCTTAA TTTTTGAATAGCACG TERM 363 236444 - 236425 - H 74 -3.7 -5.08367 | AACATAAATTAAAAA CAAATTA TTAGGG TAATTTG GTGGTCAATGCTAGA TERM 364 236898 - 236878 - g 71 -6.9 -4.10007 | ATAATTCTGCCAAAA TTGCAACTC AAG AAGCTGCAA TTAAAGAAGCAACTG LSA0242 236661 - 237815 + | extracellular protein precursor TERM 365 237833 - 237861 + F 76 -4.5 -5.07652 | opp_overlap 237824 TAATATTAAAAAAAG GATGGTCCCTCTA TTA TCGGCGGATCATC TTTTATTTTGCAACG LSA0243 238004 - 239818 + | putative glycerophosphodiester phosphodiesterase TERM 366 239858 - 239831 - f 100 -12.8 -4.52703 | opp_overlap 239832, overlap 239832 TAAAGCAGGATAAAA GGGCGGTCTAAA TGTG TTTAGACCGCCT TTTTTGAGAGATTTC TERM 367 239857 - 239832 - f 100 -16.3 -3.30538 | opp_overlap 239832, overlap 239831 AAAGCAGGATAAAAG GGCGGTCTAAA TGTG TTTAGACCGCC TTTTTTGAGAGATTT TERM 368 239832 - 239857 + F 100 -16.3 -5.03747 | opp_overlap 239832 239831 AAAGCAGGATAAAAG GGCGGTCTAAA TGTG TTTAGACCGCC TTTTTTGAGAGATTT TERM 369 240502 - 240475 - g 95 -9.2 -4.41633 | opp_overlap 240474 240475, overlap 240472 240477 TATTTTTAAAAAGAA TACCCAAGCTCT TGAT AAAGCTTGGGAA ATTATAAGAATCATT TERM 370 240500 - 240477 - g 100 -11.8 -3.80746 | opp_overlap 240475 240474, overlap 240475 240472 TTTTTAAAAAGAATA CCCAAGCTCT TGAT AAAGCTTGGG AAATTATAAGAATCA LSA0244 239981 - 240652 + | integral membrane protein TERM 371 240692 - 240648 - f 88 -5.2 -5.61596 | gap 1, opp_overlap 240658 240682, overlap 240658 240682 ATCCCCATAAAAAAA TCTAATCAAATGGTTTGTCAC GGAG GTGGCAAACCATTTTTTT-GA TTAGAAAAATGTTAT TERM 372 240658 - 240683 + F 100 -12.7 -5.63103 | opp_overlap 240648 240658 240682, overlap 240682 AAAAATCTAATCAAA TGGTTTGTCAC GGAG GTGGCAAACCA TTTTTTTGATTAGAA TERM 373 240683 - 240658 - f 89 -10.5 -4.00683 | opp_overlap 240658 240682, overlap 240648 240682 AAAAATCTAATCAAA TGGTTTGTCAC GGAG GTGGCAAACCA TTTTTTTGATTAGAA LSA0245 240742 - 241317 + | lipoprotein precursor TERM 374 241331 - 241354 + F 100 -8.1 -5.2422 | AAAGATTAATAACGG GCAGTCTCC TTTAGT GGGGGCTGC TTTTTTAATGTGGTT TERM 375 241405 - 241378 - f 75 -8.7 -3.50853 | opp_overlap 241378 241384, overlap 241384 TGTGGTTAAGCATAA TAAAAAGTTAG GCTTTG CTAACTTTTTA TTTACTTTAAATTAA TERM 376 241378 - 241405 + F 81 -8.7 -4.10672 | opp_overlap 241378 241384, overlap 241384 TGTGGTTAAGCATAA TAAAAAGTTAG GCTTTG CTAACTTTTTA TTTACTTTAAATTAA TERM 377 241399 - 241384 - f 73 -3.3 -5.24416 | opp_overlap 241378 241384, overlap 241378 TAAGCATAATAAAAA GTTAG GCTTTG CTAAC TTTTTATTTACTTTA TERM 378 241384 - 241399 + F 76 -3.3 -5.41941 | opp_overlap 241384 241378, overlap 241378 TAAGCATAATAAAAA GTTAG GCTTTG CTAAC TTTTTATTTACTTTA mntH1 241472 - 243046 + | Mn(2+)/Fe(2+) transport protein usp2 243064 - 243498 + | universal stress protein UspA family protein TERM 379 243499 - 243557 + F 100 -19.2 -2.64747 | opp_overlap 243501 243512, overlap 243501 243512 TTAGTAGTCCGTTAA TAGAATATTAAAAGGCGTTGGGACAAAG GAT CATTGTCTCAACGCCTTTTTGCATTCTA ATTATGGTAAGCTAA TERM 380 243555 - 243501 - f 100 -15.2 -3.0263 | opp_overlap 243501 243499 243512, overlap 243512 AGTAGTCCGTTAATA GAATATTAAAAGGCGTTGGGACAAAG GAT CATTGTCTCAACGCCTTTTTGCATTC TAATTATGGTAAGCT TERM 381 243501 - 243555 + F 100 -17.4 -2.86449 | opp_overlap 243501 243512, overlap 243499 243512 AGTAGTCCGTTAATA GAATATTAAAAGGCGTTGGGACAAAG GAT CATTGTCTCAACGCCTTTTTGCATTC TAATTATGGTAAGCT TERM 382 243544 - 243512 - f 100 -14.9 -4.49167 | opp_overlap 243501 243499 243512, overlap 243501 AATAGAATATTAAAA GGCGTTGGGACAAAG GAT CATTGTCTCAACGCC TTTTTGCATTCTAAT TERM 383 243512 - 243544 + F 100 -17.1 -4.78752 | opp_overlap 243512 243501, overlap 243501 243499 AATAGAATATTAAAA GGCGTTGGGACAAAG GAT CATTGTCTCAACGCC TTTTTGCATTCTAAT TERM 384 244346 - 244297 - g 100 -11.5 -5.26875 | opp_overlap 244309 TTGCCAACCAAAAAA CACGCACCAGTACGACAACGCTT GAAT ATACGTTGTTGTATTGGCACGTG TAAAGGGAAGACATT LSA0248 243609 - 244349 + | hypothetical protein LSA0249 245428 - 244364 - | hypothetical protein LSA0250 245582 - 246370 + | hypothetical protein efp1 246457 - 247020 + | elongation factor P TERM 385 247052 - 247075 + F 100 -11.8 -5.12617 | opp_overlap 247052 ATGTTTAATGCAAAA CAGTTCACCA ATTT TGGTGAGCTG TTTTTTAGATGCTTG TERM 386 247075 - 247052 - f 86 -9.6 -4.27584 | opp_overlap 247052 ATGTTTAATGCAAAA CAGTTCACCA ATTT TGGTGAGCTG TTTTTTAGATGCTTG TERM 387 248016 - 247988 - g 81 -5.4 -5.19212 | gap 1 ATGACTACTAAAAAA GTCCCAGTTGA TATTGAAC TCAAC-GGGAC ATTGACGCGCGGGAT iunH1 247214 - 248149 + | inosine-uridine preferring nucleoside hydrolase LSA0253 249237 - 248146 - | transcriptional regulator TERM 388 248408 - 248436 + g 100 -9.8 -5.54894 | gap 1 AATAATCCAGTATGA GGCATTAGAACAT AAAT ATGTTCT-ATGCC TTTTTTTAGTAGCTT LSA0254 249406 - 250344 + | putative carbohydrate kinase LSA0255 250363 - 251058 + | putative phosphoribosyl isomerase LSA0256_a 251107 - 251370 + | hypothetical protein TERM 389 251416 - 251430 + T 70 -6.4 -4.09739 | overlap 251417 ATTACTTAATTTAAT TTTCGG AGG CCGAAG TTTTAGCCCCGTTCA tnpB3-IS1520 252308 - 251511 - | IS3 family transposase tnpA3-IS1520 252580 - 252329 - | IS3 family transposase TERM 390 252642 - 252654 + H 84 -4.8 -5.252 | opp_overlap 252642, overlap 252635 252634 AATTCCATCATAGGA GCCA CCCTA TGGC TTTTTTATCAGCATA LSA0257 252814 - 253011 + | hypothetical protein LSA0258 253021 - 254172 + | putative iron-containing alcohol dehydrogenase (oxidoreductase) LSA0259 254195 - 255385 + | pyrimidine-specific nucleoside symporter TERM 391 255397 - 255421 + F 100 -8.7 -5.96894 | opp_overlap 255391 255396, overlap 255391 TTAAAAATATAGGAG CATCTCTTAAT TTT AATAAGAGATG TTTTTTTATTTCGAT LSA0260 255502 - 256488 + | putative aldo/keto reductase (oxidoreductase) TERM 392 256550 - 256594 + T 100 -19.6 -5.19998 | opp_overlap 256564 256566 ACTTTAAGCAGCTTT CTGGGTTGTAAAAATTCGGT ATTCA ACCGGACTTTTACAACCCAG TTTTGTTTTAATTCT tnpB1-ISLsa2 257350 - 256538 - | IS150 family transposase TERM 393 256671 - 256636 - G 86 -10.6 -3.79445 | opp_overlap 256636 AATCATCAATCCAAA CCGATATTTGTGAAAC TAAC GTTTCATAAGTATCGG TTTCTTTTTGGTAGA TERM 394 256636 - 256671 + g 100 -15 -4.91852 | opp_overlap 256636 AATCATCAATCCAAA CCGATATTTGTGAAAC TAAC GTTTCATAAGTATCGG TTTCTTTTTGGTAGA tnpA1-ISLsa2 257709 - 257392 - | IS150 family transposase TERM 395 257952 - 257919 - R 100 -19.8 -5.0916 | opp_overlap 257919 TGGTCAATATAAAAA CCCCCGATATTGGA TTCTGG TCCAATATCGGGGG TTCACTTCACAAATG TERM 396 257919 - 257952 + r 100 -20.5 -3.17392 | opp_overlap 257919 TGGTCAATATAAAAA CCCCCGATATTGGAT TCTG GTCCAATATCGGGGG TTCACTTCACAAATG TERM 397 258087 - 258099 + r 70 -5.5 -4.49906 | overlap 258080 258088 TTATTCAGCTGTTTC TGCAG TTG CTGCG TTTGTTTGGATCTTG LSA0263 258539 - 258072 - | integral membrane protein LSA0264 260111 - 258582 - | putative glycine/betaine/carnitine/choline transport protein TERM 398 259034 - 259022 - G 74 -7.7 -3.96681 | overlap 259019 TCAATAAAGTAACAA GGTCA ACT TGACC GGAACTTTGTAAGAA TERM 399 260247 - 260208 - R 100 -12.2 -5.48213 | opp_overlap 260208 TAGTCAAAATAAAAA GCGCCCATACAATTGGTC AACT GACCACCTGTACAAGCGC GTTATTATAACGTAT LSA0265 260881 - 260348 - | PadR family transcriptional regulator rpsN 261086 - 261355 + | 30S ribosomal protein S14 TERM 400 261538 - 261502 - f 100 -18.3 -3.20901 | opp_overlap 261503 261511, overlap 261511 AGCGCAGGAACCTAA CTAGAAAAAGAGGTCTC TTC GAGACCTCTTTTTCTAT GTCTTGAACTTGCAA TERM 401 261503 - 261537 + F 100 -21.8 -3.10612 | opp_overlap 261502 261511, overlap 261511 GCGCAGGAACCTAAC TAGAAAAAGAGGTCTC TTC GAGACCTCTTTTTCTA TGTCTTGAACTTGCA TERM 402 261529 - 261511 - f 100 -13.2 -4.98857 | opp_overlap 261503 261511, overlap 261502 ACCTAACTAGAAAAA GAGGTCTC TTC GAGACCTC TTTTTCTATGTCTTG TERM 403 261511 - 261529 + F 100 -13.2 -5.09685 | opp_overlap 261511 261502, overlap 261503 ACCTAACTAGAAAAA GAGGTCTC TTC GAGACCTC TTTTTCTATGTCTTG LSA0267 261620 - 261664 + | hypothetical protein LSA0268 261705 - 262880 + | putative drug:H(+) antiporter TERM 404 262888 - 262921 + T 100 -11.1 -5.2189 | opp_overlap 262888 AAGAGTAATTAAAAA GGACCTGAGACAAAA GCAA TTTTGTCCCAAGTCC TTTTTTGATGGTTAA TERM 405 262921 - 262888 - T 100 -15.5 -4.92777 | opp_overlap 262888 AAGAGTAATTAAAAA GGACCTGAGACAAAA GCAA TTTTGTCCCAAGTCC TTTTTTGATGGTTAA LSA0269 263604 - 262933 - | TetR family transcriptional regulator TERM 406 263675 - 263689 + H 75 -8.6 -3.47573 | opp_overlap 263674 263667 263675, overlap 263684 TGTTAAAGTATTAAC TCGAAC ACT GTTCGA TTATACTGTACATGA LSA0270 263747 - 264820 + | putative multidrug ABC exporter, membrane-spanning/permease subunit LSA0271 264817 - 265458 + | putative multidrug ABC exporter, ATP-binding subunit TERM 407 266700 - 266719 + G 76 -10 -3.28416 | TGATGTGGATCAAGG CGCCGTTA AGAT TGACGGCG TTGATATCCGTGATA LSA0272 265462 - 267255 + | putative multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits TERM 408 267302 - 267328 + T 75 -10.2 -2.79098 | opp_overlap 267309, overlap 267299 267306 ATTAGCAGTGGATTG CGAATGAGCGAC GAA GTCGATCATTTG TGATTCGTAGCTAAC TERM 409 267306 - 267324 + T 73 -7.4 -4.08144 | opp_overlap 267309, overlap 267302 267299 GCAGTGGATTGCGAA TGAGCGAC GAA GTCGATCA TTTGTGATTCGTAGC TERM 410 267423 - 267388 - T 100 -19.2 -5.03145 | opp_overlap 267388 CAAGCCTCCAAAAAA TCCCGATTCAGCCATT TTAT ATTGGCTGAATCGGGA TTTTTTGATTATGCG TERM 411 267388 - 267423 + T 100 -19.2 -5.32944 | opp_overlap 267388 CAAGCCTCCAAAAAA TCCCGATTCAGCCATT TTAT ATTGGCTGAATCGGGA TTTTTTGATTATGCG LSA0273 268523 - 267432 - | putative DNA helicase (C-terminal fragment), authentic frameshit LSA0274 269481 - 268534 - | putative DNA helicase (N-terminal fragment), authentic frameshift TERM 412 269609 - 269656 + r 100 -19.4 -2.54325 | opp_overlap 269616, overlap 269616 ATTGCTCTAAAAACG GTAAAAAGAGGTGCTCCCAAAA TTAA TTCTGGGAGCACCTCTTTTGGC GTCTCTTTGAAAGGG TERM 413 269649 - 269616 - R 100 -20.5 -4.7657 | opp_overlap 269616 269609 TAAAAACGGTAAAAA GAGGTGCTCCCAAAA TTAA TTCTGGGAGCACCTC TTTTGGCGTCTCTTT TERM 414 269616 - 269649 + r 100 -18.3 -4.20074 | opp_overlap 269616, overlap 269609 TAAAAACGGTAAAAA GAGGTGCTCCCAAAA TTAA TTCTGGGAGCACCTC TTTTGGCGTCTCTTT TERM 415 269751 - 269733 - R 72 -8.2 -3.58522 | opp_overlap 269733 269723 269734 269736, overlap 269734 ACGACGATTGTCAAA CTAGCGAT TAC ATCGCTAA TTCGTCACTCTATGT TERM 416 269734 - 269750 + r 71 -9.5 -2.52491 | opp_overlap 269733 269734, overlap 269733 269723 269736 CGACGATTGTCAAAC TAGCGAT TAC ATCGCTA ATTCGTCACTCTATG TERM 417 269750 - 269734 - R 72 -9.5 -2.74792 | opp_overlap 269734 269733 269723 269736, overlap 269733 CGACGATTGTCAAAC TAGCGAT TAC ATCGCTA ATTCGTCACTCTATG LSA0275 270722 - 269925 - | putative serine/tyrosine protein phosphatase guaB 270971 - 272452 + | inositol-5-monophosphate dehydrogenase TERM 418 272470 - 272504 + F 95 -7.2 -5.28176 | gap 1 CTATGTTAAAATGAA GGCGCTGG-GGCAAA TTTAAT TTTGTCGCCGGCGTC TTTTTTATGGGTGGA LSA0277 272611 - 273297 + | two-component system, response regulator TERM 419 273376 - 273393 + G 84 -6.3 -5.00467 | AGTTGTTTGCTGAGG GGATCAT TACG GTGATCC TTTTATTGTTGTTAA LSA0278 273297 - 274496 + | two-component system, sensor histidine kinase TERM 420 275792 - 275812 + G 74 -6.9 -4.33004 | TTAATCGGTACGGGT GTTCGTGAA TTT TTCACCAAC TTATTTTAATTAAAT dacA 274535 - 275821 + | D-alanyl-D-alanine carboxypeptidase precursor TERM 421 275833 - 275867 + F 100 -12.4 -5.14965 | opp_overlap 275832 275836 TTAATTAAATCAGAG GAATGCTTAAGCGA GAACCGA TCGTTTAAGCATTC TTTTTTAGTGAGAAT TERM 422 276484 - 276514 + G 73 -10.4 -2.52635 | opp_overlap 276484, overlap 276483 ACTTGTTCCACGATA TGCGCCAGGCTGTT GAA AACGGCATGACGCA CTTGGTAATGGAAGT TERM 423 276514 - 276484 - g 75 -10.4 -2.78463 | opp_overlap 276484 276483 ACTTGTTCCACGATA TGCGCCAGGCTGTT GAA AACGGCATGACGCA CTTGGTAATGGAAGT TERM 424 276967 - 276991 + G 84 -9.9 -3.76224 | CGACGGCGGCCATTA TTGGCGCAGCC TTA GGCGGTGCCGA TTTAATCGCTGCCCA murE 275970 - 277511 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase LSA0281 277534 - 278157 + | lipoprotein precursor TERM 425 278166 - 278203 + F 100 -11.5 -5.16237 | opp_overlap 278166 TTGGTAATCGACTAA TAGGAGTTGAGACAGAA ATTA TTTTGTCGCAATTCCTA TTTTTTGATGACGTT LSA0282 278307 - 279194 + | putative zinc/iron ABC transporter, substrate-binding lipoprotein precursor TERM 426 279733 - 279749 + G 80 -6.5 -4.83615 | overlap 279727 279734 AGAGCTAAATCGTCT GCACGGT TTA ACCGTGA TTTTTGTCACCCATG TERM 427 279734 - 279748 + G 78 -10 -3.49687 | overlap 279727 279733 GAGCTAAATCGTCTG CACGGT TTA ACCGTG ATTTTTGTCACCCAT LSA0283 279191 - 279871 + | putative zinc/iron ABC transporter, ATP-binding subunit LSA0284 279906 - 280682 + | putative zinc/iron ABC transporter, membrane-spanning subunit TERM 428 280725 - 280668 - T 100 -17.5 -3.24747 | gap 1, opp_overlap 280676 280688, overlap 280670 280688 CTTTTATATCATCAA CATGTTAGTCATTAAAAAAAGTCTGGCC AGT GGCCAGACTTTTTTTAATGGTTA-CATA TCAGCAAGTAATGCT TERM 429 280723 - 280670 - T 100 -17.9 -3.18849 | gap 1, opp_overlap 280676 280688, overlap 280668 280688 TTTATATCATCAACA TGTTAGTCATTAAAAAAAGTCTGGCC AGT GGCCAGACTTTTTTTAATGGTTA-CA TATCAGCAAGTAATG TERM 430 280676 - 280718 + T 100 -24.6 -3.12351 | opp_overlap 280670 280668 280688, overlap 280688 TCATCAACATGTTAG TCATTAAAAAAAGTCTGGCC AGT GGCCAGACTTTTTTTAATGG TTACATATCAGCAAG TERM 431 280706 - 280688 - T 100 -14.6 -5.53991 | opp_overlap 280676 280688, overlap 280670 280668 TAGTCATTAAAAAAA GTCTGGCC AGT GGCCAGAC TTTTTTTAATGGTTA TERM 432 280688 - 280706 + T 100 -14.6 -5.58074 | opp_overlap 280688 280670 280668, overlap 280676 TAGTCATTAAAAAAA GTCTGGCC AGT GGCCAGAC TTTTTTTAATGGTTA pepF1 282524 - 280719 - | oligoendopeptidase F1 TERM 433 281432 - 281460 + g 71 -6.8 -4.08216 | gap 1, opp_overlap 281440, overlap 281435 281436 281440 TGTCATATGCGCCGC CAGA-GTAAGCGC CACT GCGCTTGCCTTTG TTTTCAACGACATCA TERM 434 281435 - 281456 + g 77 -6.5 -4.64861 | opp_overlap 281440, overlap 281432 281436 281440 CATATGCGCCGCCAG AGTAAGCGC CACT GCGCTTGCC TTTGTTTTCAACGAC TERM 435 281436 - 281455 + g 76 -10 -3.38435 | opp_overlap 281440, overlap 281435 281432 281440 ATATGCGCCGCCAGA GTAAGCGC CACT GCGCTTGC CTTTGTTTTCAACGA TERM 436 282358 - 282384 + g 73 -8.8 -3.40878 | overlap 282361 282362 ATCGTTATTACGAGT TGATCAGCCGTT TTA AACGGTTGGTTA TATTGTTCAAGTGCT TERM 437 282361 - 282381 + g 75 -8.3 -3.8372 | overlap 282358 282362 GTTATTACGAGTTGA TCAGCCGTT TTA AACGGTTGG TTATATTGTTCAAGT TERM 438 282362 - 282380 + g 70 -9.6 -2.89509 | overlap 282361 282358 TTATTACGAGTTGAT CAGCCGTT TTA AACGGTTG GTTATATTGTTCAAG LSA0286 282718 - 283905 + | LytR family transcriptional regulator TERM 439 283963 - 283934 - f 100 -19.5 -4.77216 | opp_overlap 283934 AATAACAGTCAAAAA CAGCGTCATCAAG TTTA CTTGATGACGCTG TTTTTGTTATAACCA TERM 440 283934 - 283963 + F 100 -19.5 -5.18726 | opp_overlap 283934 AATAACAGTCAAAAA CAGCGTCATCAAG TTTA CTTGATGACGCTG TTTTTGTTATAACCA LSA0287 284050 - 285285 + | pyrimidine-specific nucleoside symporter TERM 441 285328 - 285304 - f 90 -2.9 -6.04419 | AAAATAACAAAAAAA CTGGATTTG GTAGTGA CAAATTCAG CATAAAATAGTATTA TERM 442 285478 - 285503 + F 100 -9.9 -5.626 | opp_overlap 285478 285501 AGAATCGTTGAAGAA GTGTTAAGTAG ATAA CTATTTAACAC TTTTTTTGTACGCTA LSA0288 285590 - 286321 + | GntR family transcriptional regulator TERM 443 286309 - 286325 + F 71 -5.1 -4.65219 | TTTTGTTTCAGTCAG CGGTC GGGAATA GACCG TTATTTTTATCTTCT TERM 444 286440 - 286424 - f 71 -4.4 -4.85822 | opp_overlap 286424 AGCAGAAACATAAAA GTTGCA AATCA CGCAAC TTATTCATAAAGTGA TERM 445 287245 - 287223 - g 70 -2.7 -5.03715 | gap 1, overlap 287235 ACGATCCTGAAAAAA TGCACCCAGC AACT GCTGC-TGCA ATGGATGAAGCCATC xpk 286496 - 288859 + | putative phosphoketolase TERM 446 288875 - 288896 + F 100 -13.1 -5.66684 | opp_overlap 288875 TTTAGTGGTAAAAAA CAGATTGGG GCAA CCCAATCTG TTTTTTTATGGATTC TERM 447 288896 - 288875 - f 100 -13.1 -5.03314 | opp_overlap 288875 TTTAGTGGTAAAAAA CAGATTGGG GCAA CCCAATCTG TTTTTTTATGGATTC TERM 448 289658 - 289637 - g 70 -8.1 -3.6608 | gap 1, overlap 289644 ATCATTTGATGGAAA TCACACACGT CTT ACGTG-GTGA CGATCATATCGCCAA TERM 449 289706 - 289723 + G 71 -4.9 -4.7373 | gap 1, opp_overlap 289720 CCGTTTACGAAGCCT TTGGCTGG GAA CCA-CCAA TTTTTGGTCACATGA gltX 288994 - 290481 + | glutamyl-tRNA synthetase TERM 450 290521 - 290483 - f 76 -6.1 -4.62772 | opp_overlap 290489, overlap 290486 290489 CCGAAATTAAATAAA GAAGAAGTGTCACGGAT AACTA ATCTGTGACACTTTTTT TGTATCAGATATTAA TERM 451 290518 - 290486 - f 82 -7.8 -4.39724 | opp_overlap 290489, overlap 290483 290489 AAATTAAATAAAGAA GAAGTGTCACGGAT AACTA ATCTGTGACACTTT TTTTGTATCAGATAT TERM 452 290489 - 290515 + F 100 -11.7 -5.71712 | opp_overlap 290489 290486 290483 TTAAATAAAGAAGAA GTGTCACGGAT AACTA ATCTGTGACAC TTTTTTTGTATCAGA TERM 453 290515 - 290489 - f 86 -9.5 -4.26693 | opp_overlap 290489, overlap 290486 290483 TTAAATAAAGAAGAA GTGTCACGGAT AACTA ATCTGTGACAC TTTTTTTGTATCAGA kdgK 290616 - 291638 + | 2-dehydro-3-deoxygluconokinase TERM 454 291616 - 291626 + F 70 -8.2 -3.31461 | TCGCACAAAGTGGCG GCGG TGC CCGC TTATCACGATAAATA budC 291710 - 292480 + | acetoin reductase TERM 455 292522 - 292493 - T 100 -20.9 -5.02231 | opp_overlap 292493 TAAAAATATTAAAAA GGGCACGTACAAG CTAA CTTGTACGTGCCC TTTTTAGGTTAGAGT TERM 456 292493 - 292522 + T 100 -20.9 -4.74504 | opp_overlap 292493 TAAAAATATTAAAAA GGGCACGTACAAG CTAA CTTGTACGTGCCC TTTTTAGGTTAGAGT LSA0293 292842 - 292531 - | XRE family DNA-binding protein LSA0294 293046 - 293642 + | lipoprotein precursor LSA0295 293639 - 293992 + | hypothetical protein TERM 457 294032 - 293997 - T 100 -17.8 -5.03314 | opp_overlap 294000, overlap 294000 TTGATCGCTAAAAAA GAAGAGGTACCGACAA TTTC TTGTCGGTACCTCTTT TTGATAGTTCTCGTT TERM 458 294000 - 294029 + T 100 -19.5 -4.8269 | opp_overlap 294000 293997 ATCGCTAAAAAAGAA GAGGTACCGACAA TTTC TTGTCGGTACCTC TTTTTGATAGTTCTC TERM 459 294029 - 294000 - T 100 -19.5 -4.62085 | opp_overlap 294000, overlap 293997 ATCGCTAAAAAAGAA GAGGTACCGACAA TTTC TTGTCGGTACCTC TTTTTGATAGTTCTC gntR 294890 - 294048 - | gluconate operon transcriptional regulator TERM 460 294507 - 294527 + g 77 -6.1 -4.70626 | ACTAAGCAGATGGGC GCGGTTG ATTAAGG CGACCGC TTTTTGAAGTTGTTC gntZ 295038 - 295937 + | 6-phosphogluconate dehydrogenase-like protein gntK 295972 - 297531 + | gluconokinase TERM 461 297575 - 297533 - f 80 -8.7 -3.86776 | gap 1, opp_overlap 297535, overlap 297535 297540 CAACTAAGGATTAAA GATTAAACGTTCAATCACCA AAAG TGG-GATTGAGCGTTTAATT TGTTAATTTAATGTA TERM 462 297535 - 297573 + F 100 -13.5 -4.41302 | gap 1, opp_overlap 297533 297535 297540 ACTAAGGATTAAAGA TTAAACGTTCAATCACCA AAAG TGG-GATTGAGCGTTTAA TTTGTTAATTTAATG TERM 463 297573 - 297535 - f 84 -11.3 -3.51124 | gap 1, opp_overlap 297535, overlap 297533 297540 ACTAAGGATTAAAGA TTAAACGTTCAATCACCA AAAG TGG-GATTGAGCGTTTAA TTTGTTAATTTAATG TERM 464 297568 - 297540 - f 70 -6.8 -4.02719 | gap 1, opp_overlap 297535, overlap 297535 297533 GGATTAAAGATTAAA CGTTCAATCACCA AAAG TGG-GATTGAGCG TTTAATTTGTTAATT gntP 297622 - 298974 + | gluconate:H(+) symporter TERM 465 298993 - 299024 + F 100 -11 -5.2189 | opp_overlap 298993 AGTTATTATTCAAAA GAGTTGCGGCGAAA TTCA TTTTGTCGTAACTC TTTTTTAATGATTAA LSA0300 299266 - 300150 + | hypothetical protein LSA0301 300163 - 300288 + | hypothetical protein TERM 466 300301 - 300329 + T 100 -17.6 -4.07975 | opp_overlap 300301 TAACACAAATAAAAA GAGCACCAAGAC CTAAT GTCTTGGTGCTC TTTGTGATTAGATTA TERM 467 300329 - 300301 - T 100 -17.6 -5.4659 | opp_overlap 300301 TAACACAAATAAAAA GAGCACCAAGAC CTAAT GTCTTGGTGCTC TTTGTGATTAGATTA LSA0302 301446 - 300337 - | putative anion:Na(+) symporter LSA0303 301745 - 302095 + | hypothetical protein LSA0304 302163 - 302246 + | hypothetical protein TERM 468 302354 - 302378 + F 100 -12.2 -5.4505 | TGATTGTAATCGCGA CAGGGGTAGC TAGAT GCTATCCCTG TTTTTTATTGGAAAG LSA0305 302410 - 303954 + | putative drug resistance ABC transporter, two ATP-binding subunits aspD 304048 - 305655 + | aspartate aminotransferase TERM 469 305712 - 305656 - f 74 -8 -3.93216 | opp_overlap 305667, overlap 305667 TCTAAAGCACAATAA GGTGTAATGAAGGGCGTTAGAACAAC GATAA GTTGTTCTAACGCCCTTTTTGTGTCC CACTTAGTAGAATTT TERM 470 305667 - 305701 + F 100 -21.7 -4.9725 | opp_overlap 305667 305656 ATAAGGTGTAATGAA GGGCGTTAGAACAAC GATAA GTTGTTCTAACGCCC TTTTTGTGTCCCACT TERM 471 305701 - 305667 - f 100 -21.7 -3.36135 | opp_overlap 305667, overlap 305656 ATAAGGTGTAATGAA GGGCGTTAGAACAAC GATAA GTTGTTCTAACGCCC TTTTTGTGTCCCACT TERM 472 305905 - 305891 - f 76 -5.8 -4.65969 | opp_overlap 305890 305891 AATAAATAATTAAAA TGTTTT TGA AAAACA CTTGTTATTTAATTC TERM 473 306397 - 306377 - f 73 -6.2 -4.42619 | gap 1 TAATACCGCATAAAA CCTAACACC GCAT GGTGT-AGG GTTGAAAGATGGTTT TERM 474 307730 - 307711 - f 72 -9.2 -2.65808 | opp_overlap 307714 307717, overlap 307708 307723 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 475 307800 - 307822 + F 71 -4.9 -4.56978 | opp_overlap 307784, overlap 307801 CAAAACTTTGTTTAG TTTTGAGAG GTCTA CTCTCAAAC TTTGTTCTTTGAAAA TERM 476 307801 - 307821 + F 70 -8.4 -3.33464 | opp_overlap 307784, overlap 307800 AAAACTTTGTTTAGT TTTGAGAG GTCTA CTCTCAAA CTTTGTTCTTTGAAA TERM 477 308265 - 308246 - f 88 -10.8 -3.66803 | opp_overlap 308245 308244 308247 GGGGAAGAGCCCAAA CCAAGAAG CTTG CTTCTTGG GGTTGTAGGACAGAA TERM 478 309640 - 309612 - f 71 -5.2 -4.57482 | overlap 309615 309629 CTAGTGAGAAATAAA CTACCCGTACCG TAAAC CGACACAGGTGG TCGAGGAGAATATCC TERM 479 311109 - 311129 + F 100 -11.9 -5.57396 | opp_overlap 311109 CACGCAATTTAAAAA GGTTGAACC TCA GGTTCAGCC TTTTTTGTTAGTTAT TERM 480 311129 - 311109 - f 100 -9.7 -4.75174 | opp_overlap 311109 CACGCAATTTAAAAA GGTTGAACC TCA GGTTCAGCC TTTTTTGTTAGTTAT trxA2 311169 - 311504 + | thioredoxin TERM 481 311543 - 311506 - T 100 -22.3 -3.68244 | opp_overlap 311506 311511, overlap 311511 ATCATGAAGGCTAAA TAAAAGGCGAGACATCC AAAT GGACGTCTCGCCTTTTA TTTTGTTAAGCTTAA TERM 482 311506 - 311543 + T 100 -20.1 -4.68103 | opp_overlap 311506 311511, overlap 311511 ATCATGAAGGCTAAA TAAAAGGCGAGACATCC AAAT GGACGTCTCGCCTTTTA TTTTGTTAAGCTTAA TERM 483 311511 - 311538 + T 100 -15.6 -5.27476 | opp_overlap 311506 311511, overlap 311506 GAAGGCTAAATAAAA GGCGAGACATCC AAAT GGACGTCTCGCC TTTTATTTTGTTAAG TERM 484 311538 - 311511 - T 100 -17.8 -4.90525 | opp_overlap 311511 311506, overlap 311506 GAAGGCTAAATAAAA GGCGAGACATCC AAAT GGACGTCTCGCC TTTTATTTTGTTAAG LSA0308 312736 - 311555 - | putative drug:H(+) antiporter LSA0309 312970 - 313728 + | hypothetical protein LSA0310 313746 - 314213 + | integral membrane protein TERM 485 314409 - 314431 + F 100 -11.4 -5.66684 | opp_overlap 314409 314412 AATACTGTCGAGAAA GATCTTTCCT TTT AGGAAAGGTC TTTTTTTGTGGCTTA TERM 486 314431 - 314409 - f 83 -9.2 -3.87641 | opp_overlap 314409, overlap 314412 AATACTGTCGAGAAA GATCTTTCCT TTT AGGAAAGGTC TTTTTTTGTGGCTTA TERM 487 314428 - 314412 - f 72 -9.5 -2.71125 | opp_overlap 314409, overlap 314409 ACTGTCGAGAAAGAT CTTTCCT TTT AGGAAAG GTCTTTTTTTGTGGC TERM 488 315500 - 315488 - g 71 -4.1 -4.84274 | opp_overlap 315488 TAATTACATTAAAAA GGTTA TTC CAACC TTAATCTTTGCCTTT LSA0311 314604 - 316001 + | putative glutamate/aspartate:cation symporter LSA0312 316023 - 317357 + | coenzyme A disulfide reductase TERM 489 317400 - 317373 - f 70 -2.7 -5.10461 | opp_overlap 317373 GTGATTTAAGAAAAA GGGATGACAAA TTAAAT TTTGTTGTCCC TTTTTTAGTACTTTC TERM 490 317373 - 317400 + F 90 -7.1 -5.243 | opp_overlap 317373 GTGATTTAAGAAAAA GGGATGACAAA TTAAAT TTTGTTGTCCC TTTTTTAGTACTTTC LSA0313 317566 - 319107 + | cell surface protein precursor TERM 491 319125 - 319145 + F 100 -8.3 -5.63645 | opp_overlap 319125 319120 ACTTAAAAATTAAAA CATCTCACG TTC TGTGGGATG TTTTTTGTGTTTTAG TERM 492 319145 - 319125 - f 75 -5.4 -4.78661 | opp_overlap 319125, overlap 319120 ACTTAAAAATTAAAA CATCTCAC GTTCT GTGGGATG TTTTTTGTGTTTTAG LSA0314 319208 - 319861 + | hypothetical protein TERM 493 319912 - 319878 - T 100 -18.9 -4.67353 | opp_overlap 319878 GTATCGATTCAAAAA GGGTCTAAGACAAAA TTTAC TTTTGTCTTAGACCC TTTTTTATTATCCGA TERM 494 319878 - 319912 + T 100 -18.9 -5.55769 | opp_overlap 319878 GTATCGATTCAAAAA GGGTCTAAGACAAAA TTTAC TTTTGTCTTAGACCC TTTTTTATTATCCGA LSA0315 320589 - 319948 - | hypothetical protein sdhB 320963 - 321613 + | L-serine dehydratase, beta subunit (L-serine deaminase) sdhA 321630 - 322523 + | L-serine dehydratase, alpha subunit (L-serine deaminase) TERM 495 322535 - 322525 - f 73 -5.4 -4.57482 | opp_overlap 322525 GTATTGATAAATAAA TAGC TTT GCTA TTTTAGGAGGAAATT TERM 496 323154 - 323176 + G 73 -5.6 -4.42386 | opp_overlap 323152 323154 GGGTTGTTAACAATA TGATGAACTA TGT TGGCTCATCA TTTTATAAATGGAAA TERM 497 323550 - 323576 + G 86 -6.6 -4.98255 | overlap 323544 323552 ATACACTTGGTATGA TTTCAATCGTAC TTG GTGCGGTTGGGA TTTTTGTAATTGGGA LSA0318 322553 - 324490 + | putative oligopeptide transporter LSA0319 324471 - 324824 + | hypothetical protein TERM 498 325197 - 325166 - g 100 -11 -4.99861 | gap 1, opp_overlap 325173 CATTAACGAGAAAAA CGTCG-CACTTTCTG CCA CAGAAAGTGTCTACG CTAACGAACGGGTTT TERM 499 325173 - 325189 + G 70 -9.5 -2.89564 | opp_overlap 325166 GAGAAAAACGTCGCA CTTTCTG CCA CAGAAAG TGTCTACGCTAACGA pepD3 324882 - 326303 + | U34 family dipeptidase D TERM 500 326329 - 326355 + F 100 -13.1 -5.52384 | opp_overlap 326327 GCTTTTAATTAATTT GTCACACTTCC AAGGG GGGAGTGTGAC TTTTTTTGGTGGAGG LSA0321 326379 - 327230 + | integral membrane protein TERM 501 327224 - 327281 + T 90 -7.2 -5.07652 | opp_overlap 327235, overlap 327226 327235 TCGCTTTGAAAGTAA TGAATAAAAAAGAGCCGATTCAACAA GATTAA TTGTTGAATCGGCTCTTTTAGGACTA TTTTGTTTTAGCGGC TERM 502 327226 - 327279 + T 76 -7.6 -4.16397 | opp_overlap 327235, overlap 327224 327235 GCTTTGAAAGTAATG AATAAAAAAGAGCCGATTCAACAA GATTAA TTGTTGAATCGGCTCTTTTAGGAC TATTTTGTTTTAGCG TERM 503 327270 - 327235 - T 100 -19.3 -5.5604 | opp_overlap 327226 327224 327235 GTAATGAATAAAAAA GAGCCGATTCAACAA GATTAA TTGTTGAATCGGCTC TTTTAGGACTATTTT TERM 504 327235 - 327270 + T 100 -19.3 -4.16146 | opp_overlap 327235, overlap 327226 327224 GTAATGAATAAAAAA GAGCCGATTCAACAA GATTAA TTGTTGAATCGGCTC TTTTAGGACTATTTT LSA0323 327494 - 327279 - | hypothetical protein LSA0324 327693 - 328016 + | haloacid dehalogenase family hydrolase (N-terminal fragment), authentic frameshift LSA0325 328051 - 328536 + | haloacid dehalogenase family hydrolase (C-terminal fragment), authentic frameshift TERM 505 328694 - 328717 + T 100 -8.9 -5.60993 | opp_overlap 328694 ATCATTCGAATTAAA GACTGTTGC TAATGT GCAACGGTC TTTTTTTGTACCAAA TERM 506 328736 - 328759 + T 70 -8.2 -3.30474 | opp_overlap 328736 328743, overlap 328729 328741 TTTTGTACCAAAAAA GGAAACGCTT AGGC AATCGTTTCC TTAGTGGTTGTAACG TERM 507 328759 - 328736 - T 100 -8.2 -5.14563 | opp_overlap 328736 328729 328741, overlap 328743 TTTTGTACCAAAAAA GGAAACGCTT AGGC AATCGTTTCC TTAGTGGTTGTAACG LSA0326 331041 - 328744 - | putative DNA helicase TERM 508 329279 - 329291 + g 73 -2.7 -5.0925 | overlap 329275 TAGCTCTTCGTCAAA CTAAT TTG GTTAG TTTTTAGTTTTGGAA TERM 509 330179 - 330155 - G 72 -7.9 -3.87869 | opp_overlap 330144 330143 TGAAGCCCCGAGAAA CGATGACTTAA AAA TTCAGCCATCG TCACTTGGCGCATAT TERM 510 330756 - 330774 + g 75 -3.1 -5.19328 | CAAAATAAGGAGAGT CGACTAA ATCCG TTAGCCG TTTTTGTTGTGACGT TERM 511 331329 - 331359 + H 100 -17.1 -5.30155 | TGGTACCACGTCTAA GCGTCCTAATTGT GAACA ACAATTAGGACGC TTTTTTAGTTGATAA trpS 331397 - 332413 + | tryptophanyl-tRNA synthetase II TERM 512 332463 - 332429 - f 91 -11.5 -3.90291 | opp_overlap 332429 ATTTTGTTAATGAAA GCTTGATTGAACGCC AGTTA GGAGATCAATCAAGC TTTTCTTATGGCATT TERM 513 332429 - 332463 + F 100 -11.5 -4.78839 | opp_overlap 332429 ATTTTGTTAATGAAA GCTTGATTGAACGCC AGTTA GGAGATCAATCAAGC TTTTCTTATGGCATT TERM 514 333863 - 333895 + G 74 -7.9 -4.01135 | gap 1, overlap 333868 CTTTACCGGGGCTAG CATGG-CCAATCCA TTAGCT TGGATTGGTTCATG TTTAGTCTTATTGGG TERM 515 333868 - 333889 + G 73 -8.8 -3.49943 | overlap 333863 CCGGGGCTAGCATGG CCAATCCA TTAGCT TGGATTGG TTCATGTTTAGTCTT LSA0328 332622 - 333989 + | putative drug:Na(+) antiporter (drug efflux pump) TERM 516 334123 - 334112 - g 73 -7.2 -4.23379 | overlap 334109 AAGCCAAAACAACAA CGGC TTTA GCCG CTAAGACGTTCAAAA LSA0329 333982 - 334518 + | putative DNA-entry nuclease precursor (N-terminal fragment), authentic frameshift LSA0330 334564 - 334779 + | putative DNA-entry nuclease precursor (C-terminal fragment), authentic framesshift TERM 517 334791 - 334818 + F 95 -7 -5.26875 | opp_overlap 334784 334791 ATAATAAATTAGTAA GATTGGCAACCA AGTT TGACTGCCAATC TTTTTTAGTTAGAGG TERM 518 334818 - 334791 - f 85 -11.4 -3.38256 | opp_overlap 334791, overlap 334784 ATAATAAATTAGTAA GATTGGCAACCA AGTT TGACTGCCAATC TTTTTTAGTTAGAGG LSA0331 334876 - 335478 + | hypothetical protein TERM 519 335883 - 335897 + G 79 -7 -4.68994 | overlap 335882 ACATTTACGAATATC GCCGGC TTT GGCGGC TTTTTAGGTGCTAGT TERM 520 336159 - 336171 + G 76 -7.7 -4.19238 | TTCTTTAGCGATTTA TCCGT TAA ACGGA TTTTGCGCTTAACGG LSA0332 335565 - 338186 + | integral membrane protein TERM 521 338464 - 338452 - g 70 -7.7 -3.57462 | opp_overlap 338452 338450 CACCTGAGCGTCAAA TCGAC ATG GTCGA TGTTAATGAACGCGC TERM 522 338522 - 338501 - g 86 -3.1 -5.67063 | gap 1, overlap 338502 TTTAGCACAAAAAAA CTGCGATTTG AAT CAAATC-CAA AATGTTGCAATCTTT LSA0333 338196 - 338801 + | putative nucleotide methyltransferase LSA0334 338874 - 339218 + | extracellular protein precursor TERM 523 339230 - 339272 + F 91 -10.1 -4.45544 | overlap 339242 ATAAAAAACGACTAA GAGTGTTTCTAGGACAAAG ATGTC TTTTGTTTTAGGGACACTC TTTTGATTGGTAAAG TERM 524 339242 - 339253 + F 76 -4.4 -5.07652 | overlap 339230 TAAGAGTGTTTCTAG GACA AAGA TGTC TTTTGTTTTAGGGAC LSA0335 339299 - 339817 + | putative cytidine deaminase TERM 525 339955 - 339931 - f 75 -10.1 -2.92267 | opp_overlap 339931, overlap 339928 339924 TTTAGAAATTAACCA GGATTAGGTCA ATA TGACTTAATCC TTTTTTAGTGCCTAG TERM 526 339931 - 339955 + F 100 -12.3 -5.1675 | opp_overlap 339928 339924 339931 TTTAGAAATTAACCA GGATTAGGTCA ATA TGACTTAATCC TTTTTTAGTGCCTAG TERM 527 340000 - 340033 + F 77 -8.1 -3.90744 | opp_overlap 340000 340021 340022, overlap 340004 TCATGTTGTATAGGA TTAGCCTCGTCGCGT GAAT AAGCGACGAGGTCGA TTGTTTGCGCGGCGC TERM 528 340004 - 340029 + F 88 -13.3 -2.71101 | opp_overlap 340000 340021 340022, overlap 340000 GTTGTATAGGATTAG CCTCGTCGCGT GAAT AAGCGACGAGG TCGATTGTTTGCGCG TERM 529 340101 - 340135 + F 70 -2.8 -5.16237 | TTCAGAAGATGCAGG GAGACTGAAGCTAAAA TTA TTTTTGGAGCAGTCTC TTTTTTAGTGCCCTT TERM 530 340136 - 340163 + F 74 -10 -2.64243 | TTTTGGAGCAGTCTC TTTTTTAGTGCC CTTA GGCCCTAAAAAA TACTGTAAAATATGC dnaX 340242 - 341957 + | DNA-directed DNA polymerase III, gamma/tau subunit TERM 531 342081 - 342102 + G 70 -9.5 -2.88243 | opp_overlap 342061 342080, overlap 342077 342075 TAAACAGCACTGAAT TCGTTGGCA AGGT TGCTAACGA TGCTGTTGTTGTGAC LSA0337 341984 - 342292 + | hypothetical protein recR 342318 - 342914 + | recombination DNA repair protein RecR LSA0339 342931 - 343185 + | hypothetical protein TERM 532 343195 - 343236 + F 100 -16.1 -5.06414 | opp_overlap 343195 AGATAACCAAAAAAA GATTGGACCCTTGATAAAA GTGA TTTTATCGGGGGACCAATC TTTTTATTAGCGAAC TERM 533 343236 - 343195 - f 100 -11.7 -5.69379 | opp_overlap 343195 AGATAACCAAAAAAA GATTGGACCCTTGATAAAA GTGA TTTTATCGGGGGACCAATC TTTTTATTAGCGAAC TERM 534 343924 - 343892 - g 72 -9.9 -2.76936 | opp_overlap 343892 343891, overlap 343902 GATTAAAACAATTGA TGCCTCACAACCCCT TGA AGCGGTTGTGACACA ATGTTTACAAGTCAT tmk 343329 - 343973 + | thymidylate kinase (dTMP kinase) TERM 535 344187 - 344175 - g 83 -9.1 -4.22375 | AGATTATTGAAGAAA CGTGC CAA GCACG CGAACAATTCATGAC LSA0341 343988 - 344317 + | hypothetical protein holB 344321 - 345313 + | DNA polymerase III subunit delta' LSA0343 345365 - 345718 + | hypothetical protein TERM 536 345737 - 345772 + F 75 -9.6 -3.23733 | opp_overlap 345727 345736 345738, overlap 345738 345763 TTAAGCAACGCAAAC AGGGCGCTGAGGCAAG ATCA TTTGTCGCGGCGCCCG CTTTTATAAGCTCGA TERM 537 345738 - 345771 + F 87 -13.1 -2.53918 | opp_overlap 345727 345738 345736, overlap 345737 345763 TAAGCAACGCAAACA GGGCGCTGAGGCAAG ATCA TTTGTCGCGGCGCCC GCTTTTATAAGCTCG TERM 538 345763 - 345773 + F 86 -8.2 -4.4009 | opp_overlap 345738 345736, overlap 345738 345737 GCAAGATCATTTGTC GCGG CGC CCGC TTTTATAAGCTCGAG LSA0344 345817 - 346695 + | putative methyltransferase TERM 539 346970 - 346983 + G 71 -3.1 -4.93365 | AGTTATAATCGCTAT TTCTG TTAT CGGAA TTTTTGGTTGTACGA LSA0345 346706 - 347452 + | putative Acyl-ACP thioesterase LSA0346 347520 - 347717 + | hypothetical protein TERM 540 347750 - 347798 + T 93 -7.7 -5.24129 | gap 1, opp_overlap 347762, overlap 347762 ATTGCTAGTACGTAA TGAATTAAAAAAGGCGAGGACA TGTTAT TGTCCTCGCCTTTTT-AGCTAA TTTTTTATGAGACGG TERM 541 347787 - 347762 - T 100 -14.8 -5.32565 | opp_overlap 347750 347762 TAATGAATTAAAAAA GGCGAGGACA TGTTAT TGTCCTCGCC TTTTTAGCTAATTTT TERM 542 347762 - 347787 + T 100 -14.8 -4.7329 | opp_overlap 347762, overlap 347750 TAATGAATTAAAAAA GGCGAGGACA TGTTAT TGTCCTCGCC TTTTTAGCTAATTTT asnA1 348777 - 347803 - | L-asparaginase TERM 543 349034 - 349054 + H 93 -6.8 -5.71983 | GCAGTGTTATTTGTG GCAACTCC AAAAG GGAGATGC TTTTTTTATGGTTAA LSA0348 349062 - 349598 + | integral membrane protein TERM 544 349649 - 349611 - f 73 -6.1 -4.44355 | opp_overlap 349614, overlap 349608 349612 349614 TAATTTTAAAAACAA CGACCACTTTGATAAAG TTATT CTTTATCAAGGTGGTTT TTTAGTGCAGCTAAA TERM 545 349648 - 349612 - f 75 -9.6 -3.25528 | opp_overlap 349614, overlap 349611 349608 349614 AATTTTAAAAACAAC GACCACTTTGATAAAG TTATT CTTTATCAAGGTGGTT TTTTAGTGCAGCTAA TERM 546 349614 - 349646 + F 100 -14.4 -5.14965 | opp_overlap 349612 349611 349608 349614 TTTTAAAAACAACGA CCACTTTGATAAAG TTATT CTTTATCAAGGTGG TTTTTTAGTGCAGCT TERM 547 349646 - 349614 - f 87 -12.2 -3.17725 | opp_overlap 349614, overlap 349612 349611 349608 TTTTAAAAACAACGA CCACTTTGATAAAG TTATT CTTTATCAAGGTGG TTTTTTAGTGCAGCT LSA0349 349739 - 350464 + | O-sialoglycoprotein metallo-endopeptidase LSA0350 350526 - 350993 + | GNAT family N-acetyltransferase LSA0351 351004 - 352038 + | O-sialoglycoprotein metallo-endopeptidase TERM 548 352101 - 352119 + T 74 -8.2 -3.66356 | opp_overlap 352091 352089 352087 352104, overlap 352102 ACACAGAATGGCGAA TGATTGCT GTA AGCAATCG TTTGAGATTCAGAGT TERM 549 352102 - 352118 + T 73 -9.5 -2.79492 | opp_overlap 352091 352089 352087 352104, overlap 352101 CACAGAATGGCGAAT GATTGCT GTA AGCAATC GTTTGAGATTCAGAG TERM 550 352226 - 352244 + T 74 -8.2 -3.66356 | opp_overlap 352216 352214 352212 352229, overlap 352227 ACACAGAATGGCGAA TGATTGCT GCA AGCAATCG TTTGAGATTCAGAGT TERM 551 352227 - 352243 + T 73 -9.5 -2.79492 | opp_overlap 352216 352214 352212 352229, overlap 352226 CACAGAATGGCGAAT GATTGCT GCA AGCAATC GTTTGAGATTCAGAG TERM 552 352357 - 352321 - T 100 -19.6 -5.60689 | opp_overlap 352321 TTAGATAACAAAAAA GGGGGCTGGGACAAAA TTTAC TTTTGTCTCAGCCCCC TTTTGTTAGGCTTCA TERM 553 352321 - 352357 + T 100 -21.8 -4.68103 | opp_overlap 352321 TTAGATAACAAAAAA GGGGGCTGGGACAAAA TTTAC TTTTGTCTCAGCCCCC TTTTGTTAGGCTTCA LSA0352 353622 - 352363 - | integral membrane protein TERM 554 352669 - 352653 - G 73 -3.6 -4.99947 | overlap 352654 TTGAAGCAAACAAAA CCGGGA AGATA TCCCCG CCAAGCCAACCGGTG TERM 555 353485 - 353499 + g 73 -5.6 -4.56597 | opp_overlap 353484 AATGGCGTCTAAGAG GCTACC AAA GGTTGC TTTTTGCCAGAAAAG TERM 556 353662 - 353640 - H 81 -2.8 -5.75342 | opp_overlap 353641, overlap 353641 TGCCTCCAAAAAAAA GTGTCTAAAT GCC ATTTAAACAT AGTTGACGTAAAAAG LSA0353 353900 - 354217 + | putative cellobiose-specific phosphotransferase system, enzyme IIB TERM 557 354232 - 354255 + F 100 -16.8 -4.87893 | opp_overlap 354232 ATGATTAAAAACAAA GCCCGCCTAA TTAA TTAGGCGGGC TTTTTGATTAGGGTT TERM 558 354255 - 354232 - f 100 -16.8 -4.92756 | opp_overlap 354232 ATGATTAAAAACAAA GCCCGCCTAA TTAA TTAGGCGGGC TTTTTGATTAGGGTT LSA0354 354317 - 354679 + | hypothetical protein TERM 559 354676 - 354715 + T 100 -17.4 -4.90266 | opp_overlap 354685, overlap 354685 CAAACAAATTGTTGG CTAAAAAAAGCGCGTATC CTAC GATACGCGCTTTTTCTGG TTTTTAATTAGTAAA TERM 560 354706 - 354685 - T 100 -14.5 -5.40072 | opp_overlap 354676 354685 TGTTGGCTAAAAAAA GCGCGTATC CTAC GATACGCGC TTTTTCTGGTTTTTA TERM 561 354685 - 354706 + T 100 -14.5 -5.1286 | opp_overlap 354685, overlap 354676 TGTTGGCTAAAAAAA GCGCGTATC CTAC GATACGCGC TTTTTCTGGTTTTTA LSA0355 356665 - 354719 - | putative drug resistance ABC transporter, two ATP-binding subunits TERM 562 354775 - 354793 + g 77 -4.5 -4.91459 | overlap 354753 354777 AATCAGCTTCTGTTT GGGCAAG GTCTG CTTGCAC TTTTTCTAAATCTTG TERM 563 355793 - 355817 + g 70 -3.6 -4.83169 | gap 1 GCGGCTTTGGGCTTG CTTAGT-CGTG CTGG CTCGAACTAAG TTTTTGTCGACGAAT TERM 564 356145 - 356128 - G 76 -9.9 -3.23853 | overlap 356126 TTTTCTCAAGTAATA GCTTAGC AAGT GCTAAGC GGGACCGTTCGCCAC TERM 565 357325 - 357299 - g 74 -6.6 -4.35604 | overlap 357306 TGAAGTTACAACAAA TTGAAATCGTCA TCT TGACGGTCCCAA TCGAAGTTGCTCAAA LSA0356 356863 - 357510 + | redox-sensing transcriptional repressor Rex TERM 566 357512 - 357554 + T 100 -11.5 -5.53991 | gap 1, opp_overlap 357512 AAGCGTCAAAATAAA TAGAGCCTCATTAACCAGCA GTGA TGTCGGTTGATG-GGCTCTA TTTTTTTAATGACTG TERM 567 357554 - 357512 - T 91 -9.3 -4.66535 | gap 1, opp_overlap 357512 AAGCGTCAAAATAAA TAGAGCCTCATTAACCAGCA GTGA TGTCGGTTGATG-GGCTCTA TTTTTTTAATGACTG LSA0357 358192 - 357560 - | hypothetical protein groS 358364 - 358648 + | Co-chaperonin GroES (10 kD chaperonin) (protein Cpn10) TERM 568 358943 - 358915 - g 71 -8.3 -3.54307 | overlap 358918 AATATGGGTGCCAAA TTAGTTTCTGAAG TTG CTTCAAAAACGAA CGACATCGCCGGTGA TERM 569 358940 - 358918 - g 73 -10 -2.90615 | overlap 358915 ATGGGTGCCAAATTA GTTTCTGAAG TTG CTTCAAAAAC GAACGACATCGCCGG groEL 358702 - 360327 + | chaperonin GroEL TERM 570 360383 - 360399 + F 73 -7.3 -4.18042 | opp_overlap 360378, overlap 360384 GCCTAACAAGGCGGA TGATTGC GCA GCAATCG TTTGATTTGTGTAGC TERM 571 360384 - 360398 + F 70 -8.6 -3.10102 | opp_overlap 360378, overlap 360383 CCTAACAAGGCGGAT GATTGC GCA GCAATC GTTTGATTTGTGTAG TERM 572 360494 - 360536 + F 100 -16.6 -2.71011 | opp_overlap 360499, overlap 360499 TTTGAGGATTAACGG TGAAATGGGCATTATGGTGA TTC TTGCCATAATGCCCATTTTG TAGTTAAGCGGAGGT TERM 573 360499 - 360531 + F 100 -16.5 -4.5442 | opp_overlap 360499, overlap 360494 GGATTAACGGTGAAA TGGGCATTATGGTGA TTC TTGCCATAATGCCCA TTTTGTAGTTAAGCG TERM 574 360531 - 360499 - f 90 -12.2 -3.61764 | opp_overlap 360494 360499 GGATTAACGGTGAAA TGGGCATTATGG TGATTCTTG CCATAATGCCCA TTTTGTAGTTAAGCG TERM 575 360595 - 360625 + F 100 -14 -5.31545 | opp_overlap 360595 GTACGGTCCAACCAA GGCTGTCCCCAGCA TTT TACTGGGGATGGCC TTTTTTACTGTTGTT TERM 576 360625 - 360595 - f 85 -11.8 -3.34344 | opp_overlap 360595 GTACGGTCCAACCAA GGCTGTCCCCAGCA TTT TACTGGGGATGGCC TTTTTTACTGTTGTT LSA0360 360954 - 362705 + | putative amino acid/polyamine transport protein TERM 577 362828 - 362858 + F 100 -9.8 -6.01187 | opp_overlap 362828 GCATTAACAAAAAAA CTTGCCCTAGACTG TTT TAGTTTAGTGCAAG TTTTTTTGTTTCATT TERM 578 362858 - 362828 - f 100 -6.9 -5.84381 | opp_overlap 362828 GCATTAACAAAAAAA CTTGCCCTAGACT GTTTT AGTTTAGTGCAAG TTTTTTTGTTTCATT LSA0361 362960 - 363766 + | hypothetical protein TERM 579 363823 - 363810 - g 71 -2.3 -5.1285 | overlap 363811 AAAAAACAAAAGAAA CGCCA ATGA TGGCC CAATATCAAAAGGTT TERM 580 364676 - 364696 + G 78 -10.5 -3.27525 | opp_overlap 364676 364679, overlap 364679 GGTCGCTTATTAAAA CAATGGTTG GAA CGACCATTG TTGGATTTAAACCAG TERM 581 364696 - 364676 - g 82 -8.3 -4.25104 | opp_overlap 364676 364679, overlap 364679 GGTCGCTTATTAAAA CAATGGTTG GAA CGACCATTG TTGGATTTAAACCAG mutS 363788 - 366391 + | DNA mismatch repair protein TERM 582 366830 - 366818 - g 80 -2.7 -5.5353 | overlap 366823 TAGAGGAACAAAAAA CAAAT CCG ATTCG ACCGGGGACGGCGAT TERM 583 367627 - 367606 - g 78 -9.3 -3.61764 | overlap 367580 367621 GCACCAACTGCTAAA GCGCCGGCG ATTA CACCGGAGC GGCCCTTATTTGAGC mutL 366412 - 368373 + | DNA mismatch repair protein maf 368373 - 368918 + | inhibitor of septum formation (Maf protein) TERM 584 369160 - 369147 - g 70 -8.1 -3.58914 | TTAAATCAACGAGAA CCAGC GCAT GCTGG CTTAAGCGATTTGGT LSA0365 368931 - 369494 + | hypothetical protein TERM 585 369498 - 369534 + F 75 -7.3 -4.25283 | opp_overlap 369492 369498 CGAGAATATTAATCA TTGGGATTAGGACCG AGTAGGG CGGGACTGATCCCAA TTTTGGTGAACAGAT TERM 586 369617 - 369655 + F 90 -10.4 -4.2704 | opp_overlap 369620 369627 369630, overlap 369620 369627 TCTGCGCTTAACGAC GAATGCCAAATAAGCGAT TGA ATCGCTTATTCGTCACTC TTTGTTAATGCTCAA TERM 587 369652 - 369620 - f 90 -12.9 -3.27298 | opp_overlap 369617 369620 369627, overlap 369627 369630 GCGCTTAACGACGAA TGCCAAATAAGCGAT TGA ATCGCTTATTCGTCA CTCTTTGTTAATGCT TERM 588 369620 - 369652 + F 77 -10.7 -2.83344 | opp_overlap 369620 369627 369630, overlap 369617 369627 GCGCTTAACGACGAA TGCCAAATAAGCGAT TGA ATCGCTTATTCGTCA CTCTTTGTTAATGCT TERM 589 369645 - 369627 - f 86 -10.4 -3.68244 | opp_overlap 369620 369617 369627, overlap 369620 369630 ACGACGAATGCCAAA TAAGCGAT TGA ATCGCTTA TTCGTCACTCTTTGT TERM 590 369627 - 369645 + F 79 -10.4 -3.2404 | opp_overlap 369627 369620 369630, overlap 369620 369617 ACGACGAATGCCAAA TAAGCGAT TGA ATCGCTTA TTCGTCACTCTTTGT TERM 591 369642 - 369630 - f 74 -7.7 -3.97019 | opp_overlap 369627 369620 369617, overlap 369627 369620 ACGAATGCCAAATAA GCGAT TGA ATCGC TTATTCGTCACTCTT ruvA 369905 - 370516 + | Holliday junction DNA helicase RuvA TERM 592 370841 - 370853 + G 75 -3.3 -5.12172 | opp_overlap 370834 TTATTAAACGAGTTA CAACC CGG GGATG TTTTATTTATTGATG ruvB 370529 - 371536 + | Holliday junction DNA helicase B queA 371551 - 372582 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase LSA0369 372606 - 373130 + | GNAT family N-acetyltransferase TERM 593 373180 - 373159 - f 89 -10.3 -4.06055 | opp_overlap 373159 ATTGTCCAAACGAAA CTAAGATAC TCAG GTATCTTAG TTTTTTTTATGTTTT TERM 594 373159 - 373180 + F 100 -10.3 -6.18768 | opp_overlap 373159 ATTGTCCAAACGAAA CTAAGATAC TCAG GTATCTTAG TTTTTTTTATGTTTT TERM 595 374120 - 374106 - g 70 -2.9 -5.00616 | GTGGCTTTGAAAAAA TCTTA GCAAT TAAGA TTCCACATAATCATG arcA 373337 - 374572 + | arginine deiminase (arginine dihydrolase) TERM 596 374656 - 374643 - g 73 -3.9 -4.93296 | TTATTAGCAGAAAAA GATTT TACT AAATC AGAACTCGAATACTT TERM 597 375410 - 375398 - g 74 -6.3 -4.41494 | GACCGGTAACGAAAA CATGA TTA TCATG CACTGTTTACCAGCT arcB 374598 - 375614 + | ornithine carbamoyltransferase TERM 598 375629 - 375665 + F 78 -3.8 -5.26875 | gap 2, opp_overlap 375641 ACTAGATTGTAGAAA GGGGCTGGAAAACAAAAC TTT GTTTTGTC--CCGGCTCC TTTTTTAATTGAAAC TERM 599 375655 - 375641 - f 73 -7.2 -4.0896 | opp_overlap 375629 AAAGGGGCTGGAAAA CAAAAC TTT GTTTTG TCCCGGCTCCTTTTT TERM 600 375745 - 375755 + G 74 -6.8 -4.3739 | overlap 375737 CGTCGTTGCATTAGG TGGC AAT GCCA TTTTATCAACCGATG arcC 375713 - 376657 + | carbamate kinase arcT 376669 - 377784 + | transaminase TERM 601 378071 - 378060 - g 73 -7.2 -4.11216 | opp_overlap 378059 378060 CTCTTACGCTGAAAA GGGC TTTG GCCC CTTTGCCGGCTTCAT arcD 377818 - 379245 + | arginine/ornithine antiporter arcR 379317 - 380018 + | arginine deiminase TERM 602 380058 - 380094 + F 82 -6.8 -4.9725 | gap 1, opp_overlap 380069, overlap 380059 GATTAAGTTTAAAAG TCCATAATAAATCGTCT TAAA AGACGACT-ATTATGGG TTTTTATGTGCCAAT TERM 603 380059 - 380093 + F 72 -8.1 -3.57627 | gap 1, opp_overlap 380069, overlap 380058 ATTAAGTTTAAAAGT CCATAATAAATCGTCT TAAA AGACGACT-ATTATGG GTTTTTATGTGCCAA TERM 604 380084 - 380069 - f 78 -7.6 -4.33851 | opp_overlap 380059 380058 AAAGTCCATAATAAA TCGTCT TAAA AGACGA CTATTATGGGTTTTT TERM 605 381276 - 381290 + G 72 -7.8 -3.82084 | overlap 381273 GTGCTTCTAGTTTAG TGGGCG TCT CGCTCA TTATTGGTCTTGCGC LSA0376 380156 - 381715 + | putative transport protein tgt 381807 - 382949 + | queuine tRNA-ribosyltransferase TERM 606 383160 - 383149 - g 81 -4.4 -5.40014 | AAACAACAACAAAAA CATC AAGA GATG GTTAACCAAATGAAA LSA0378 383023 - 383379 + | hypothetical protein TERM 607 383391 - 383429 + F 100 -9.9 -5.71983 | gap 1, opp_overlap 383391 ATAGTAATTTAAAAA GCGTGGTTAA-TTTTCTA GCGA TAGAAAAATTAGCCATGC TTTTTTTGTGATTGG TERM 608 383429 - 383391 - f 75 -5.5 -4.76892 | gap 1, opp_overlap 383391 ATAGTAATTTAAAAA GCGTGGTTAA-TTTTCTA GCGA TAGAAAAATTAGCCATGC TTTTTTTGTGATTGG TERM 609 383766 - 383747 - g 72 -7.2 -3.95852 | gap 1 ATTCGATCAAGCAAA GGTGGATCA TAT TG-TCCACC AAATGGCGATTGCCG TERM 610 384148 - 384135 - g 70 -8.1 -3.59247 | GAAGAAGCCGTTAAA GCTGG CTTA CCAGC TGACGCCTTATTATT adhE 383622 - 386216 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 611 386377 - 386364 - f 70 -5.3 -4.49337 | opp_overlap 386364 GGAGAACTGAGAAAA GTTTG TCGA CAAAC TTGATTAAGGATCGG LSA0380 386400 - 387062 + | metal(Iron)-dependent transcriptional regulator zwf 387082 - 388578 + | glucose-6-phosphate 1-dehydrogenase TERM 612 388587 - 388625 + F 73 -9.1 -3.32963 | gap 1, opp_overlap 388584, overlap 388592 AAAATAAGAATTGCC GAGAAGTCTGCGTGTGAA GCCA TTCATAC-CAGGCTTTTC TTATCGCGTGAAAGT TERM 613 388592 - 388620 + F 75 -5.4 -4.78237 | gap 1, opp_overlap 388584, overlap 388587 AAGAATTGCCGAGAA GTCTGCGTGTGAA GCCA TTCATAC-CAGGC TTTTCTTATCGCGTG TERM 614 389234 - 389210 - g 90 -11.5 -3.61398 | GTCTTGCCGGAACAA GCAATCGCCTT TTT AAGCCGATTGC CGATTGAAAAATTTA dinP 388652 - 389782 + | DNA-damage-inducible protein P LSA0383 389902 - 391224 + | hypothetical protein LSA0384 391228 - 392181 + | DHH family phosphoesterase TERM 615 392320 - 392305 - g 70 -7.5 -3.75517 | opp_overlap 392305, overlap 392301 ACTTTACAAAACCAA CGGCG GTTCAA CGCCG TGTGATTCCAGCCAT TERM 616 392614 - 392594 - g 71 -8.3 -3.55505 | overlap 392592 AAAATTACAACAACA CCAACCACA AAT CGTGATTGG GACACCTGGTCGGAT TERM 617 393406 - 393390 - g 70 -2.9 -5.01732 | opp_overlap 393390, overlap 393391 AACCGTCGTAAAAAA CGGGTTG CAA CAACTCA TGAATTAGACGTTAA LSA0385 392226 - 393581 + | putative ATP-dependent DNA/RNA helicase LSA0386 393619 - 394605 + | hypothetical protein TERM 618 395266 - 395252 - g 71 -10 -2.70774 | overlap 395251 395254 TATCCTAAGGATAAG GATGCG CAC CGCATC TGGCACGAAAAAGTT alaS 394850 - 397486 + | alanyl-tRNA synthetase TERM 619 397498 - 397525 + F 100 -11.6 -5.40072 | opp_overlap 397498 TTAATAGATAAAAAA TAAAGTTGATTA TTTT TAATCAACTTTA TTTTTTTGCAGAAAA TERM 620 397525 - 397498 - f 100 -11.6 -5.47431 | opp_overlap 397498 TTAATAGATAAAAAA TAAAGTTGATTA TTTT TAATCAACTTTA TTTTTTTGCAGAAAA LSA0388 397672 - 397932 + | hypothetical protein TERM 621 398259 - 398223 - g 72 -9.5 -3.20858 | opp_overlap 398230 398233, overlap 398226 398233 GATTATATTGATGAA CGACTAACAACTGTTCA GGC TGAACGGATGTTAGTTG AACAAGCTGACACCT TERM 622 398256 - 398226 - g 72 -9.8 -2.79574 | opp_overlap 398230 398233, overlap 398223 398233 TATATTGATGAACGA CTAACAACTGTTCA GGC TGAACGGATGTTAG TTGAACAAGCTGACA LSA0389 397932 - 398375 + | Holliday junction resolvase-like protein TERM 623 398495 - 398471 - g 70 -5.1 -4.54323 | AAGCAGAACAAGAAA TTACTTTAATC GAT GATCAAGGTAA CGAAGAATTATACCA LSA0390 398425 - 398736 + | hypothetical protein TERM 624 398820 - 398782 - T 100 -26.4 -2.83715 | opp_overlap 398795, overlap 398819 TTGAGCATTAGCATA GGTTGTCAGATTAGCGAT TAT ATCGCTAATCTGACAACC GGCACTAAGCGCAGA TERM 625 399017 - 398984 - T 100 -14 -5.626 | opp_overlap 398984 TATGCCATAAAAAAA TAGGGATCAAGACG CTAAAT CGTCTTGGTCCCTA TTATCATTATGAGCG TERM 626 398984 - 399017 + T 100 -16.2 -3.56325 | opp_overlap 398984 TATGCCATAAAAAAA TAGGGATCAAGACG CTAAAT CGTCTTGGTCCCTA TTATCATTATGAGCG rnhC 399941 - 399024 - | ribonuclease HIII LSA0392 400135 - 400674 + | integral membrane protein TERM 627 400686 - 400706 + F 100 -9 -5.00884 | gap 1 TTAACATAGTTGTAA GGGGCTGAC GAAG GTC-GCCCC TTTTTTAGAAGGAGT LSA0393 400730 - 403093 + | MutS family DNA mismatch repair protein TERM 628 403111 - 403147 + F 93 -6.8 -5.73672 | gap 2, opp_overlap 403111 403122 TATTGAAATTAAAAA CTCAGAAGCTAGTGCATT GGT AATGC-C-GGCTTTTGAG TTTTTTTAATTGTTT trxA3 403233 - 403544 + | thioredoxin TERM 629 403596 - 403626 + F 100 -8.2 -5.1861 | opp_overlap 403591 403596 TCTCTAACAACTGAA GGACCAGGGGGAGA ATT TCTTTACCAGGTCC TTTTTTAGTCCTCAA dltA 403912 - 405444 + | D-alanine--D-alanyl carrier protein ligase TERM 630 406330 - 406342 + G 75 -3.4 -5.1356 | TAGAGATTACATCTA CATG CGGCT CATG TTTTTCTTGATGAAG dltB 405437 - 406645 + | D-alanyl transfer protein membrane protein dltC 406675 - 406911 + | D-alanine--poly(phosphoribitol) ligase subunit 2 dltD 406913 - 408184 + | lipoteichoic acid D-alanyl esterase precursor TERM 631 408217 - 408194 - T 100 -16.8 -5.46129 | opp_overlap 408194 GAATAAACTAAAAAA GCGTGCTGAC AATT GTCAGCACGC TTTTTTTATTGCTTA TERM 632 408194 - 408217 + T 100 -16.8 -5.87996 | opp_overlap 408194 GAATAAACTAAAAAA GCGTGCTGAC AATT GTCAGCACGC TTTTTTTATTGCTTA TERM 633 408321 - 408285 - T 78 -10.3 -3.01712 | opp_overlap 408285 408297, overlap 408294 CTGTGCTTTGCAACA CTTGTCAAACTAGCGAT TGC ATCGCTAATTCACCAAG TTAAGTAAATGCTCA TERM 634 408312 - 408294 - T 72 -8.2 -3.57615 | opp_overlap 408285 408297, overlap 408285 GCAACACTTGTCAAA CTAGCGAT TGC ATCGCTAA TTCACCAAGTTAAGT LSA0399 409286 - 408363 - | Iron(III)-compound ABC transporter, substrate-binding lipoprotein precursor LSA0400 409459 - 410262 + | Iron(III)-compound ABC transporter, ATP-binding subunit TERM 635 410855 - 410870 + G 71 -9 -3.24232 | CCATGGTTAATTGCT GGCTTG ATTG CAAGCC TCTGTTTGGCACCGC LSA0401 410252 - 411244 + | Iron(III)-compound ABC transporter, membrane-spanning subunit LSA0402 411241 - 412242 + | Iron(III)-compound ABC transporter, membrane-spanning subunit TERM 636 412377 - 412392 + G 71 -9 -3.29263 | opp_overlap 412374 GGGATCAACAATTTG GTGGCA AGGT TGCCAC TTATGCGGAGCGTGT LSA0403 412250 - 413236 + | putative thioredoxin reductase TERM 637 413254 - 413282 + T 95 -12.5 -4.15543 | opp_overlap 413254 GGGATAATAAAAAAA GGATCTGATGCAA ACT TGGCATCAGGTCC TTTTGAACATATTTA TERM 638 413282 - 413254 - T 100 -10.3 -5.88565 | opp_overlap 413254 GGGATAATAAAAAAA GGATCTGATGCAA ACT TGGCATCAGGTCC TTTTGAACATATTTA LSA0404 413939 - 413295 - | hypothetical protein TERM 639 413638 - 413617 - G 70 -5.8 -4.36914 | opp_overlap 413617 413616 GTTTGGGCTATAAAA CCGGCTTC GAGTTG GAAGTCGG GTGTTTTGAAATCGG murI 414104 - 414928 + | glutamate racemase TERM 640 415137 - 415110 - g 76 -9.9 -3.30243 | opp_overlap 415109 415110 415133 415134 AGTGACTGGTTACAA CAGACGCTAAC CACTTT GTTAGCGCCCG CTTTGGAAAAGACGG LSA0406 414909 - 416141 + | nucleoside triphosphatase LSA0407 416153 - 416674 + | putative phosphoesterase TERM 641 416682 - 416713 + F 95 -8.1 -4.90869 | opp_overlap 416682 GAGCTTAAAGTTAAA GACTATCCAAAGT TTAGAC GCTGTGGATAGTC TTTTTAGTTAGTGGT TERM 642 416713 - 416682 - f 71 -7.4 -3.85165 | opp_overlap 416682 GAGCTTAAAGTTAAA GACTATCCAAAG TTTAGACG CTGTGGATAGTC TTTTTAGTTAGTGGT LSA0408 416772 - 417257 + | hypothetical protein TERM 643 417311 - 417280 - T 100 -10.2 -5.15634 | opp_overlap 417280 TAGCGTATTAAAAAA GCGTTGCGCCAAAA GTCA TTTTGTCGTAACGC TTTTTTTGATAGCTA TERM 644 417280 - 417311 + T 100 -12.4 -5.53991 | opp_overlap 417280 TAGCGTATTAAAAAA GCGTTGCGCCAAAA GTCA TTTTGTCGTAACGC TTTTTTTGATAGCTA TERM 645 417393 - 417375 - T 72 -8.2 -3.55444 | opp_overlap 417378, overlap 417378 GCGTCACTCGTCAAA CAACTGCT AGC AGCAGTTA TTCGCCAAGCTGTGC TERM 646 417390 - 417378 - T 74 -7.7 -3.91716 | opp_overlap 417378, overlap 417375 TCACTCGTCAAACAA CTGCT AGC AGCAG TTATTCGCCAAGCTG TERM 647 417438 - 417426 - T 74 -7.7 -3.84719 | opp_overlap 417425 417427, overlap 417437 ATGCTCAAAGCCAAA GCGTT TCA AACGC ACTCTTTTTAAACGT TERM 648 417523 - 417487 - T 82 -10.3 -3.53012 | opp_overlap 417487, overlap 417496 CTGCGCTTTGCTAAA CTTATCAAACCGGTGAT TTC ATCACCAATTCGCTAAG TTCTGCAAATGCTCA LSA0409 418461 - 417565 - | integral membrane protein TERM 649 418319 - 418306 - G 82 -6.7 -4.83615 | opp_overlap 418293 GATTGGCCATAAAAA GCCAA TTGC TTGGC GCCAATCTTGTTTGA LSA0410 419373 - 418486 - | putative mechanosensitive ion CHANEL LSA0411 419531 - 419965 + | extracellular protein precursor LSA0412 419971 - 420408 + | hypothetical protein TERM 650 420443 - 420423 - T 100 -12.6 -4.60889 | opp_overlap 420423 AAGGATTGTTAAAAA GCCCTCAC TGATT GTGAGGGC TTTTTAATTTGGAGG TERM 651 420423 - 420443 + T 100 -12.6 -4.98531 | opp_overlap 420423 AAGGATTGTTAAAAA GCCCTCAC TGATT GTGAGGGC TTTTTAATTTGGAGG TERM 652 420484 - 420539 + T 100 -18.2 -2.85896 | opp_overlap 420495, overlap 420490 420495 TGCAACAACCTCCGC TTAATCTAAAATGAACCATAATCTTG GTTT TAAGATTATGGTTCATTTTGTATTAA TGCTTAGTTGCTAGA TERM 653 420490 - 420533 + T 100 -17.2 -3.21342 | opp_overlap 420495, overlap 420484 420495 AACCTCCGCTTAATC TAAAATGAACCATAATCTTG GTTT TAAGATTATGGTTCATTTTG TATTAATGCTTAGTT TERM 654 420495 - 420528 + T 100 -14.9 -4.71186 | opp_overlap 420495, overlap 420490 420484 CCGCTTAATCTAAAA TGAACCATAATCTTG GTTT TAAGATTATGGTTCA TTTTGTATTAATGCT TERM 655 420528 - 420495 - T 100 -14.2 -4.27316 | opp_overlap 420495 420490 420484 CCGCTTAATCTAAAA TGAACCATAATCTT GGTTTT AAGATTATGGTTCA TTTTGTATTAATGCT TERM 656 420620 - 420652 + T 78 -6.3 -4.7629 | opp_overlap 420620 CCGGTTAACAAAAAA CGCGAATCATGAC CAAGGGC GTCATAATCCGCG TTTTTAAGTTAATCC TERM 657 420652 - 420620 - T 100 -10.7 -5.4505 | opp_overlap 420620 CCGGTTAACAAAAAA CGCGAATCATGAC CAAGGGC GTCATAATCCGCG TTTTTAAGTTAATCC LSA0413 420774 - 420697 - | hypothetical protein pepQ 421917 - 420820 - | Xaa-Pro dipeptidase (proline dipeptidase) TERM 658 422012 - 422002 - H 81 -4 -5.56372 | overlap 422010 AAATGAAAACAAAAA TGAA AAT TTCA TAAAAATGATGTAAA TERM 659 422332 - 422321 - g 71 -4.4 -4.78572 | opp_overlap 422329 TGGCAAGTAAGAAAA CAAC AACT GTTG GGGTTATTATCCCAG CcpA 422134 - 423135 + | CcpA transcriptional regulator (catabolic control protein A) TERM 660 423144 - 423178 + T 100 -20.3 -5.59534 | opp_overlap 423144 TAAATAAAACAAAAA CAAGCGGTGATTACA TAATC TGTAATCACCGCTTG TTTTTTATTCTGATT TERM 661 423178 - 423144 - T 100 -20.3 -5.67711 | opp_overlap 423144 TAAATAAAACAAAAA CAAGCGGTGATTACA TAATC TGTAATCACCGCTTG TTTTTTATTCTGATT pbp1B 425738 - 423183 - | bifunctional glycosyltransferase/transpeptidase penicillin-binding protein 1B TERM 662 423505 - 423528 + g 82 -7.6 -4.51197 | gap 1 TCATTTTGGTAGACG CTATT-GGCTA ACT TAGCCCAATAG TTTTGATTAATTGTG TERM 663 424358 - 424332 - G 72 -9.4 -3.18264 | opp_overlap 424338 CCGGTTATCGAGTAA GACACTTCCGTT TTG AACGGGTGTGTC GCCAACTGATTGCAG TERM 664 426279 - 426267 - g 70 -2.7 -4.93877 | TTTCATGAAAGAAAA CCTAT TTA ATAAG AAACCATTTGCAAAA nagB 426022 - 426729 + | glucosamine-6-phosphate deaminase TERM 665 426774 - 426807 + T 81 -8.3 -4.19238 | opp_overlap 426768 426766 426774 GGATTAACAGAAAAA TAGCGATTATGGC GTTTCTTA GCTATGATCGCTA TTTTACGGTTAACCG TERM 666 426807 - 426774 - T 74 -3.9 -5.1244 | opp_overlap 426774, overlap 426768 426766 GGATTAACAGAAAAA TAGCGATTATGGC GTTTCTTA GCTATGATCGCTA TTTTACGGTTAACCG TERM 667 426900 - 426932 + T 79 -11.3 -2.91264 | opp_overlap 426910, overlap 426907 AGGATTAGCCTAGGC TCGTGAATGAGCGCC AAA GGCGATCGTTTGCGA TGTGTAACTAACCGG TERM 668 427044 - 427015 - T 100 -9.3 -5.24129 | opp_overlap 427015 427017, overlap 427017 CGTTTCCACAAAAAA GCCCCCACATC CAAATCAC GATGTGGGGCC TTTTTTGCTTGTATT TERM 669 427015 - 427044 + T 100 -9.3 -5.3671 | opp_overlap 427015 427017, overlap 427017 CGTTTCCACAAAAAA GCCCCCACATC CAAATCAC GATGTGGGGCC TTTTTTGCTTGTATT TERM 670 427017 - 427042 + T 77 -10.5 -2.86125 | opp_overlap 427015 427017, overlap 427015 TTTCCACAAAAAAGC CCCCACATC CAAATCAC GATGTGGGG CCTTTTTTGCTTGTA TERM 671 427042 - 427017 - T 77 -10.5 -2.83915 | opp_overlap 427017 427015, overlap 427015 TTTCCACAAAAAAGC CCCCACATC CAAATCAC GATGTGGGG CCTTTTTTGCTTGTA LSA0418 427762 - 427058 - | hypothetical protein TERM 672 427190 - 427210 + g 71 -6.7 -4.08317 | opp_overlap 427182 CATCACAGCTTGTTT GCCAGCGTT AGT GGCGCCGGC TTTGATTTGGGCTTG LSA0419 428652 - 427759 - | putative drug:H(+) antiporter (C-terminal fragment), authentic frameshift TERM 673 428254 - 428244 - GR 75 -5.4 -4.7497 | CGTACTTATCAAAAA TACG ACC CGTA ATTGGCATCATAATC LSA0420 429235 - 428621 - | putative drug:H(+) antiporter (N-terminal fragment), authentic frameshift TERM 674 429294 - 429318 + H 75 -10.2 -2.92246 | overlap 429296 429297 TAGTCGCATTTTCAG TCTTTGTCAA GTAAG TTGACAAAGA TGTCATTCGACTTGA TERM 675 429384 - 429400 + H 76 -2.2 -5.47399 | ATAGGAACGGAGTGG GGACTT GCAAA AAGACC TTTTTTTAAAGTTGA LSA0421 429388 - 429828 + | MerR family transcriptional regulator TERM 676 429882 - 429833 - f 83 -11.7 -3.10945 | opp_overlap 429838 429879, overlap 429838 CAAAAGAATAAGAAG CAAAAGTGATTGCTAGGACTC GGGCAATT GGGTCCTAACAATCACTTTTT TATTGTCTAAAAATT TERM 677 429838 - 429877 + F 100 -13 -5.60689 | opp_overlap 429833 429838 GAATAAGAAGCAAAA GTGATTGCTAGGACTCGG GCAA TTGGGTCCTAACAATCAC TTTTTTATTGTCTAA TERM 678 429877 - 429838 - f 95 -11.6 -4.61824 | opp_overlap 429838, overlap 429833 GAATAAGAAGCAAAA GTGATTGCTAGGACTC GGGCAATT GGGTCCTAACAATCAC TTTTTTATTGTCTAA LSA0422 429984 - 431216 + | hypothetical protein LSA0423 431268 - 431414 + | hypothetical protein TERM 679 431417 - 431460 + T 100 -17 -2.89808 | opp_overlap 431427, overlap 431427 TGCTAATGAATAACA GTATAAAAAAGAGACGACCA ATGT TGGTCGTCTCTTTTTAGTGC ATTTAAATTAGTTTT TERM 680 431427 - 431450 + T 100 -15.4 -4.78764 | opp_overlap 431427, overlap 431417 TAACAGTATAAAAAA GAGACGACCA ATGT TGGTCGTCTC TTTTTAGTGCATTTA TERM 681 431450 - 431427 - T 100 -15.4 -5.36965 | opp_overlap 431427 431417 TAACAGTATAAAAAA GAGACGACCA ATGT TGGTCGTCTC TTTTTAGTGCATTTA pepV 432877 - 431474 - | dipeptidase PepV TERM 682 432986 - 433030 + r 89 -12.4 -3.37727 | opp_overlap 432991, overlap 432991 AAGCGCTTCCTACTA AAAAAGAACGGCCGTTAACA ATTAC TTTTAACGGTCGTTCTTTTA TTAATGTATCTATTA TERM 683 433025 - 432991 - R 100 -10.8 -5.14563 | opp_overlap 432991 432986 CTTCCTACTAAAAAA GAACGGCCGTTAACAA TTA CTTTTAACGGTCGTTC TTTTATTAATGTATC TERM 684 432991 - 433025 + r 100 -12.3 -4.77079 | opp_overlap 432991, overlap 432986 CTTCCTACTAAAAAA GAACGGCCGTTAACA ATTAC TTTTAACGGTCGTTC TTTTATTAATGTATC LSA0425 435160 - 433070 - | putative heavy metal-transporting P-type ATPase TERM 685 433558 - 433570 + g 80 -4.7 -5.1925 | overlap 433556 TTAGCATCATCGTTT GGCGG ATG CCGAC TTTTTTCAGTTGTGC TERM 686 435356 - 435323 - R 100 -19.8 -4.9792 | opp_overlap 435323 TAGTTTAGAGAAAAA GAGGCTGCAGCAAA AGTTAA TTTGCTGCAGCCTC TTTTAATAATTAGTG TERM 687 435323 - 435356 + r 100 -19.8 -4.36411 | opp_overlap 435323 TAGTTTAGAGAAAAA GAGGCTGCAGCAAA AGTTAA TTTGCTGCAGCCTC TTTTAATAATTAGTG LSA0426 435698 - 435366 - | ArsR family transcriptional regulator LSA0427 437041 - 435713 - | putative cell surface glycerophosphoryl diester phosphodiesterase precursor TERM 688 437018 - 437006 - G 70 -5.5 -4.42667 | GTAAAAGCAGCAAAA GAGCA CGA TGCCC AGTTGTGATTTGGAC TERM 689 437250 - 437269 + H 100 -8.6 -5.47821 | TCTCTCTTATGCCAA CCACTGTC TACG GATAGTGG TTTTTTTGCGTACAT LSA0428 437335 - 437649 + | hypothetical protein LSA0429 437662 - 438264 + | putative phosphoesterase TERM 690 439213 - 439233 + G 73 -9.7 -2.93708 | opp_overlap 439213 439229, overlap 439212 439210 439217 GCAACGCAAACAGAA GCCGCTGTT TTG AACACCGGC CTATTTTTAGGCGGG TERM 691 439233 - 439213 - g 84 -9.7 -3.86372 | opp_overlap 439212 439210 439213 439217, overlap 439229 GCAACGCAAACAGAA GCCGCTGTT TTG AACACCGGC CTATTTTTAGGCGGG LSA0430 438277 - 439656 + | putative nucleotide phosphoesterase LSA0431 439675 - 440292 + | hypothetical protein LSA0432 440301 - 441086 + | HAD family sugar phosphatase LSA0433 441074 - 441715 + | integral membrane protein LSA0434 441802 - 442455 + | hypothetical protein TERM 692 442464 - 442502 + T 100 -18.3 -4.28774 | gap 1, opp_overlap 442464 ATCATAATTAAAAAA GCGCACCGCCTGATTCTC GTTT GAGA-TCAGACGGTGCGC TTTTAAATTACATAA TERM 693 442502 - 442464 - T 100 -20.5 -5.33848 | gap 1, opp_overlap 442464 ATCATAATTAAAAAA GCGCACCGCCTGATTCTC GTTT GAGA-TCAGACGGTGCGC TTTTAAATTACATAA trxB1 443496 - 442510 - | thioredoxin reductase TERM 694 444083 - 444073 - g 79 -6.8 -4.7373 | opp_overlap 444073 GCAGCTTACGAAAAA GGTG GTA CACC TTGGTTAGATCACAA LSA0436 443641 - 444225 + | putative peptidylprolyl isomerase (peptidylprolyl cis-trans isomerase) (PPIase) TERM 695 444241 - 444266 + F 100 -9.1 -5.61689 | AAATGATAATCGTGA TACCCAGTTGA TTCG TAAACTGGGTA TTTTTTATTGGTTTT LSA0437 444373 - 444750 + | hypothetical protein LSA0438 444751 - 445137 + | hypothetical protein TERM 696 445755 - 445735 - f 82 -7.6 -4.42619 | gap 1, overlap 445739 TAATACCGCATAAAA CCTAGCACC GCAT GGTGC-AGG GTTGAAAGATGGTTT TERM 697 447088 - 447069 - f 72 -9.2 -2.65808 | opp_overlap 447072 447075, overlap 447066 447081 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 698 447158 - 447180 + F 71 -4.9 -4.56978 | opp_overlap 447142, overlap 447159 CAAAACTTTGTTTAG TTTTGAGAG GTCTA CTCTCAAAC TTTGTTCTTTGAAAA TERM 699 447159 - 447179 + F 70 -8.4 -3.33464 | opp_overlap 447142, overlap 447158 AAAACTTTGTTTAGT TTTGAGAG GTCTA CTCTCAAA CTTTGTTCTTTGAAA TERM 700 447623 - 447604 - f 88 -10.8 -3.66803 | opp_overlap 447603 447602 447605 GGGGAAGAGCCCAAA CCAAGAAG CTTG CTTCTTGG GGTTGTAGGACAGAA TERM 701 448998 - 448970 - f 71 -5.2 -4.57482 | overlap 448973 448987 CTAGTGAGAAATAAA CTACCCGTACCG TAAAC CGACACAGGTGG TCGAGGAGAATATCC TERM 702 451035 - 451021 - f 74 -4.2 -4.94972 | CATCATAATGAAAAA TGCACC CAT AGCGCA ACTGGATAGAGTGTC TERM 703 452899 - 452915 + F 88 -10.9 -3.72695 | opp_overlap 452911 GAATTGGCAGACGCG CGGGATT CAA AATCCCG TTTCCTCACGGAAGT TERM 704 452998 - 452983 - f 81 -9 -4.16251 | opp_overlap 452983 ATACAAGTTTTAAAA GCCCTA AAGA TAGGGC TTTTTTGTTGTCTAA TERM 705 452983 - 452998 + F 100 -9 -5.60689 | opp_overlap 452983 ATACAAGTTTTAAAA GCCCTA AAGA TAGGGC TTTTTTGTTGTCTAA LSA0439 453089 - 453937 + | extracellular lipase/esterase precursor TERM 706 453981 - 453947 - T 100 -10.1 -5.63103 | opp_overlap 453947 TGGTAATTAAAAAAA CAGCAACATCGAC GGTTTATGA GTCGGTGTTGCTG TTTTTTTGTTCTAAG TERM 707 453947 - 453981 + T 100 -12.3 -5.88565 | opp_overlap 453947 TGGTAATTAAAAAAA CAGCAACATCGAC GGTTTATGA GTCGGTGTTGCTG TTTTTTTGTTCTAAG mleR 454883 - 453963 - | malolactic fermentation transcriptional regulator mleS 455015 - 456646 + | malate dehydrogenase mleP1 456681 - 457643 + | L-malate uniport protein TERM 708 457685 - 457655 - f 74 -8.4 -3.79906 | opp_overlap 457655, overlap 457658 CTAGTTTCATAATAA GAGCGTTAGATATT CCG AGTATCTAACGTTC TTTTTTTGTGTATAA TERM 709 457655 - 457685 + F 100 -12.8 -5.76633 | opp_overlap 457655 457658 CTAGTTTCATAATAA GAGCGTTAGATATT CCG AGTATCTAACGTTC TTTTTTTGTGTATAA LSA0443 457790 - 458158 + | putative single-stranded mRNA endoribonuclease TERM 710 459078 - 459039 - g 75 -2.2 -5.34365 | gap 1, overlap 459040 GCAGAACAACAAAAA TGGCAAACAT-CGATTGAT ACG ATCAAGCACATGTATGCCG CTATCTAAATGAAAA LSA0444 458181 - 459086 + | putative malate dehydrogenase TERM 711 459126 - 459089 - T 100 -14.4 -2.78679 | opp_overlap 459094, overlap 459094 TGCCGCTATCTAAAT GAAAAGACGTCATCCA AATTAA TGGATGACGTCTTTTT TATGTTTAAAATAGC TERM 712 459094 - 459121 + T 100 -14.3 -5.56264 | opp_overlap 459089 459094 CTATCTAAATGAAAA GACGTCATCCA AATTAA TGGATGACGTC TTTTTTATGTTTAAA TERM 713 459121 - 459094 - T 100 -14.3 -4.56914 | opp_overlap 459094, overlap 459089 CTATCTAAATGAAAA GACGTCATCCA AATTAA TGGATGACGTC TTTTTTATGTTTAAA mleP2 460079 - 459132 - | L-malate uniport protein TERM 714 460900 - 460867 - g 75 -10.3 -2.73994 | overlap 460864 ATTCTGTCAACAGCA TCGGTAACGGCCTCA CGAT TGACGCTGCTACCGA ACGGGTCAGCATTAA LSA0446 460281 - 461222 + | dihydroorotate dehydrogenase 1A LSA0447 461228 - 461926 + | haloacid dehalogenase family hydrolase gltP 461983 - 463263 + | putative glutamate/aspartate:cation symporter TERM 715 463324 - 463296 - f 100 -8.9 -5.626 | opp_overlap 463296 CAGCCGACAAAAAAA GGACTAGGATAGA AAT TGTCTCCTAGTCC TTTTGCTGTATCTGG TERM 716 463296 - 463324 + F 90 -8.9 -4.41353 | opp_overlap 463296 CAGCCGACAAAAAAA GGACTAGGATAGA AAT TGTCTCCTAGTCC TTTTGCTGTATCTGG manL 463668 - 464645 + | mannose-specific phosphotransferase system, enzyme IIAB manM 464680 - 465486 + | mannose-specific phosphotransferase system, enzyme IIC TERM 717 465948 - 465963 + G 70 -7.6 -3.68351 | opp_overlap 465948 TTTCGTTGCATGGAA TGCCAT CCGT ATGGCA TTTACATGGTACACA manN 465505 - 466416 + | mannose-specific phosphotransferase system, enzyme IID TERM 718 466460 - 466496 + F 83 -9.5 -3.95584 | opp_overlap 466469 TGAGGATTAACTGGA TTTGACGAATTGGGGCT GAA AGCACCGATTTGGCAAA TTTGGTTAATCGCAG TERM 719 466709 - 466663 - f 100 -19.7 -5.07053 | opp_overlap 466667, overlap 466667 AAGCACGTTAAAAAA CAAAGGAAGGGCTAGGGCAAA TTTAC TTTGTCCTAGCCCTTCCTTTT TATAAAAGCGTATAA TERM 720 466705 - 466667 - f 100 -20.5 -5.05153 | opp_overlap 466667, overlap 466663 ACGTTAAAAAACAAA GGAAGGGCTAGGGCAAA TTTAC TTTGTCCTAGCCCTTCC TTTTTATAAAAGCGT TERM 721 466667 - 466705 + F 100 -22.7 -4.83169 | opp_overlap 466667 466663 ACGTTAAAAAACAAA GGAAGGGCTAGGGCAAA TTTAC TTTGTCCTAGCCCTTCC TTTTTATAAAAGCGT LSA0452 466759 - 467127 + | hypothetical protein TERM 722 467141 - 467174 + F 95 -8.3 -4.82901 | opp_overlap 467145 467150, overlap 467143 AAAATGTTTAAGTTC AAGACCTAAGATAAA TTTT TTTATCTCAGGTCTC TTTTTGTGCAAAAAA TERM 723 467143 - 467172 + F 89 -10.9 -4.03995 | opp_overlap 467145 467150, overlap 467141 AATGTTTAAGTTCAA GACCTAAGATAAA TTTT TTTATCTCAGGTC TCTTTTTGTGCAAAA TERM 724 467170 - 467145 - f 76 -9.9 -3.09492 | opp_overlap 467143 467141, overlap 467150 TGTTTAAGTTCAAGA CCTAAGATAAA TTTT TTTATCTCAGG TCTCTTTTTGTGCAA LSA0453 467279 - 467503 + | hypothetical protein fabG 467503 - 468243 + | 3-ketoacyl-(acyl-carrier-protein) reductase LSA0455 468264 - 468497 + | hypothetical protein TERM 725 468775 - 468757 - g 78 -8.8 -3.86266 | opp_overlap 468757, overlap 468760 ACACCAGCACAAGAA CAACCGGG GCA CCCAGTCG CTGTTTTGAAATTGG LSA0456 468490 - 470013 + | hypothetical protein LSA0457 470050 - 470895 + | putative transport protein LSA0458 470895 - 471260 + | integral membrane protein TERM 726 471279 - 471317 + T 100 -17.6 -4.5774 | opp_overlap 471282, overlap 471282 ATACGTTTAAACATA AAAGACCCAGGGCAAGAG TAA TTCTTGCCTTGGGTCTTA TTTTGGTTATTGATC TERM 727 471314 - 471282 - T 100 -16.4 -4.78848 | opp_overlap 471282 471279 CGTTTAAACATAAAA GACCCAGGGCAAGA GTAAT TCTTGCCTTGGGTC TTATTTTGGTTATTG TERM 728 471282 - 471314 + T 100 -19.3 -4.38092 | opp_overlap 471282, overlap 471279 CGTTTAAACATAAAA GACCCAGGGCAAGAG TAA TTCTTGCCTTGGGTC TTATTTTGGTTATTG LSA0459 471755 - 471324 - | hypothetical protein TERM 729 471511 - 471538 + g 77 -4.9 -5.00884 | TTTTGCAAGTCATCG TTATCAGCGGC CTCAAA GCTGATGATAA TTTTTTCGAGGGCGT LSA0460 471893 - 471985 + | hypothetical protein TERM 730 471988 - 472022 + F 79 -5.1 -5.12617 | gap 1 CTGGTTATATTAAAA GGCAC-CAAAATGGCC AGTC GGTTGTTTTGCGTGTC TTTTTTAGATAATTC TERM 731 472840 - 472817 - g 73 -5.3 -4.72272 | GTCGCTTATGAAAAA CGGATCGAT GTTATT ATCGATGCG CTACCACGCTTGGTG LSA0461 472169 - 473371 + | putative glycosyl transferase, group 1 TERM 732 473390 - 473409 + F 100 -7.2 -5.5112 | opp_overlap 473390 ACATAATTGAAGAAA CTGTTGAT CATA ATCAGCAG TTTTTTATTGGTCAA LSA0462 473449 - 474465 + | hypothetical protein LSA0463 474478 - 475356 + | putative 2-hydroxyacid dehydrogenase LSA0464 475428 - 475661 + | hypothetical protein TERM 733 475670 - 475695 + F 77 -2.6 -5.58074 | opp_overlap 475673, overlap 475673 AGACTAGTTAATTAA CCATTGAGTA TCAAAT TACTTGGTGG TTTTTTTGCTACTTA TERM 734 475713 - 475723 + F 79 -8.2 -4.04206 | TTTTTGCTACTTAGG GCGC TTA GCGC TTTATCTAACAGTCA LSA0465 475882 - 477939 + | putative phosphoglycerol transferase TERM 735 477973 - 477950 - f 95 -12.5 -3.83771 | opp_overlap 477950, overlap 477941 AATAAAGGTAGTAAA GCCAGAGTG GTTAAT CACTCTGGC TTTTTTGCTGTCTTT TERM 736 477950 - 477973 + F 100 -13.2 -5.28755 | opp_overlap 477950 477941 AATAAAGGTAGTAAA GCCAGAGTGG TTAA TCACTCTGGC TTTTTTGCTGTCTTT LSA0466 478089 - 478523 + | FUR family transcriptional regulator TERM 737 478567 - 478555 - T 76 -3.4 -5.30686 | opp_overlap 478555 AATATTTAGAAAAAA GCAA AAAAG TTGC ATTTTTTACTTGACG TERM 738 479110 - 479090 - T 73 -6.2 -4.42619 | gap 1 TAATACCGCATAAAA CCTAACACC GCAT GGTGT-AGG GTTGAAAGATGGTTT TERM 739 480443 - 480424 - T 72 -9.2 -2.65808 | opp_overlap 480427 480430, overlap 480421 480436 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 740 480513 - 480535 + T 71 -4.9 -4.56978 | opp_overlap 480497, overlap 480514 CAAAACTTTGTTTAG TTTTGAGAG GTCTA CTCTCAAAC TTTGTTCTTTGAAAA TERM 741 480514 - 480534 + T 70 -8.4 -3.33464 | opp_overlap 480497, overlap 480513 AAAACTTTGTTTAGT TTTGAGAG GTCTA CTCTCAAA CTTTGTTCTTTGAAA TERM 742 480978 - 480959 - T 88 -10.8 -3.66803 | opp_overlap 480958 480957 480960 GGGGAAGAGCCCAAA CCAAGAAG CTTG CTTCTTGG GGTTGTAGGACAGAA TERM 743 482353 - 482325 - T 71 -5.2 -4.57482 | overlap 482328 482342 CTAGTGAGAAATAAA CTACCCGTACCG TAAAC CGACACAGGTGG TCGAGGAGAATATCC TERM 744 484261 - 484287 + T 93 -6.6 -5.68039 | overlap 484233 AAGAGACGGTTAAAA GCATTGGTCGTT TAT AACGATTGGTGC TTTTTTTGTGCGTTT TERM 745 484345 - 484330 - T 91 -6.1 -5.626 | opp_overlap 484330 484329, overlap 484317 TAGGCTATAAAAAAA CAGCC AGTCTA GGCTG CTTTTAAGGACTTAT LSA0467 484980 - 484357 - | integral membrane protein metK 485247 - 486446 + | S-adenosylmethionine synthetase TERM 746 486468 - 486506 + F 74 -4.7 -4.87665 | gap 1, opp_overlap 486468, overlap 486470 AATCGAGTAAAAGAG GCGGCCTTTCCTTAACTT ATTT AAGCTAAG-AAAGGTCTC TTTTTATGCCTAGAA TERM 747 486987 - 487002 + G 71 -6.8 -4.08144 | TGCCTCAATTATTGC GCCACT TTTA GGTGGC TTTATCGTTGATAAG TERM 748 487342 - 487352 + G 75 -8.2 -3.76968 | opp_overlap 487341 487342, overlap 487348 TTCGTTGTTCAAAAC GCGG TCG CCGC TTTAGTCAGTGGCTT LSA0469 486541 - 488001 + | putative drug:H(+) antiporter TERM 749 488007 - 488026 + T 100 -12.2 -5.9218 | opp_overlap 488007 GAAACAATAAAAAAA GATTGGCC AGTT GGCCAATC TTTTTTTGTTATCTG TERM 750 488026 - 488007 - T 100 -12.2 -6.01369 | opp_overlap 488007 GAAACAATAAAAAAA GATTGGCC AGTT GGCCAATC TTTTTTTGTTATCTG LSA0470 489060 - 488035 - | hypothetical protein LSA0471 489206 - 489598 + | putative glucitol/sorbitol phosphotransferase system, enzyme IIA TERM 751 490612 - 490624 + G 70 -7.7 -3.65224 | overlap 490623 GATGTATCCGGTCAC GACGA TTA TCGTC TTATTGGCCTCCGGT LSA0472 489614 - 490753 + | putative transport protein TERM 752 490814 - 490847 + F 100 -15.4 -5.0916 | opp_overlap 490814 TTGTCCTGAAGTGAA CCCCCGATATTGGA CCAAAA TCCAATACCGGGGG TTTTTATATTGACCA TERM 753 490847 - 490814 - f 100 -18.3 -3.17075 | opp_overlap 490814 TTGTCCTGAAGTGAA CCCCCGATATTGGAC CAAA ATCCAATACCGGGGG TTTTTATATTGACCA tnpA2-ISLsa2 491057 - 491374 + | IS150 family transposase TERM 754 492130 - 492095 - g 100 -15 -4.91852 | opp_overlap 492095 TCTACCAAAAAGAAA CCGATACTTATGAAAC GCTA GTTTCACAAATATCGG TTTGGATTGATGATT TERM 755 492095 - 492130 + G 86 -10.6 -3.79445 | opp_overlap 492095 TCTACCAAAAAGAAA CCGATACTTATGAAAC GCTA GTTTCACAAATATCGG TTTGGATTGATGATT TERM 756 492216 - 492172 - g 100 -19.6 -5.19998 | opp_overlap 492186 492188 AGAATTAAAACAAAA CTGGGTTGTAAAAGTCCGGT TGAAT ACCGAATTTTTACAACCCAG AAAGCTGCTTAAAGT tnpB2-ISLsa2 491416 - 492228 + | IS150 family transposase LSA0475 492780 - 492343 - | GNAT family N-acetyltransferase TERM 757 492756 - 492742 - G 70 -7.2 -3.78953 | AGTTGCATCACGAAA GATAAC ACT GTTATC ACCAAGTGTATGTTT TERM 758 492900 - 492926 + r 73 -6.6 -4.29049 | opp_overlap 492901, overlap 492897 492901 GTACCTAACTAAAAA AGAATCACCC CAAAAAA GGGTGATTCA TTATTTTAATAATTG TERM 759 492901 - 492925 + r 77 -10.1 -3.16345 | opp_overlap 492901, overlap 492900 492897 TACCTAACTAAAAAA GAATCACCC CAAAAAA GGGTGATTC ATTATTTTAATAATT TERM 760 492925 - 492901 - R 100 -10.8 -5.28481 | opp_overlap 492901 492900 492897 TACCTAACTAAAAAA GAATCACCCC AAAAA AGGGTGATTC ATTATTTTAATAATT guaC 493921 - 492944 - | guanosine 5'-monophosphate oxidoreductase TERM 761 494054 - 494022 - R 100 -12.8 -5.29385 | opp_overlap 494022 AAGTCAATCAAAAAA CACCGAACAATCCA GATAA TGGTTTGCTCGGTG TTTTGAAAATAATTT TERM 762 494022 - 494054 + r 89 -10.6 -4.13304 | opp_overlap 494022 AAGTCAATCAAAAAA CACCGAACAATCCA GATAA TGGTTTGCTCGGTG TTTTGAAAATAATTT TERM 763 494094 - 494078 - R 73 -7.3 -4.11906 | overlap 494093 ATAATTTAGAAATAA CGTTTCC GCC AGAAACG AAACCCTAGGAGCCC LSA0477 495021 - 494068 - | putative ion Mg(2+)/Co(2+) transport protein LSA0478 495110 - 495946 + | putative rRNA large subunit methyltransferase A TERM 764 496077 - 496111 + F 91 -5.8 -5.71712 | opp_overlap 496069 ATGAAATGACACTAA CGTAGTTTCTCG CCGTGAATAAC CGAGGGACTACG TTTTTTTATATGGAA LSA0479 496199 - 496708 + | putative rRNA methyltransferase LSA0480 496720 - 497127 + | hypothetical protein TERM 765 497775 - 497788 + G 77 -4.5 -4.97405 | opp_overlap 497775 TTGCCGTGTTAGTAA CAGTC ATGG GGCTG TTTATTTTTATGGAT TERM 766 497950 - 497940 - g 79 -6.8 -4.58585 | opp_overlap 497940 CACTCAAAGAACAAA CGCA AAA TGCG TTGTCTGCGGTTGAC TERM 767 498312 - 498286 - g 80 -2.5 -5.47821 | gap 2, opp_overlap 498292 498298, overlap 498292 498302 AGCGATTGAAAAAAA TCAACAGGTCTTG AAA CAA-ACCT-TTGA TTCGTTTGGCGTGGA TERM 768 498640 - 498650 + G 70 -5.4 -4.41895 | opp_overlap 498640 GTCGGATTTAGCGAA GATG CCG CATC TTTTGATTGCCGGTT ftsK 497267 - 499636 + | cell division DNA translocase FtsK TERM 769 499681 - 499648 - f 100 -12.7 -5.57396 | opp_overlap 499648, overlap 499679 ATAATGAACAAAAAA CGGTATTAGAATC AGTAGCAG GATTCTAATACCG TTTTTTCAAAGAAAA TERM 770 499648 - 499681 + F 100 -12.7 -5.00616 | opp_overlap 499648 499679 ATAATGAACAAAAAA CGGTATTAGAATC AGTAGCAG GATTCTAATACCG TTTTTTCAAAGAAAA TERM 771 500269 - 500241 - g 89 -6.8 -5.26119 | gap 1, overlap 500242 500243 TCGGGAAAAAGAAAA CTTGCAACGCTAT ATCG ATAGCGTTGCC-G ATGACAAACAAACTT TERM 772 500268 - 500243 - g 75 -10.5 -2.83668 | overlap 500241 500242 GGGAAAAAGAAAACT TGCAACGCTAT ATCG ATAGCGTTGCC GATGACAAACAAACT LSA0482 499834 - 501105 + | hypothetical protein TERM 773 502141 - 502155 + G 87 -8.6 -4.56597 | opp_overlap 502141 502138 502150 TATTTTGGAACATTA TCAGGA AAG TCCTGA TTTTTCAGAAGCCAA LSA0483 501095 - 502399 + | hypothetical protein LSA0484 502399 - 503130 + | oxidoreductase TERM 774 503249 - 503233 - g 73 -5.1 -4.60924 | opp_overlap 503236, overlap 503234 GAAATTGGTCAAAAA TTACGTG AAG CACGTAT TGAAAAAGGTTATAC TERM 775 503813 - 503794 - g 70 -3.6 -4.90477 | GACAAAAAAGCAAAA GAAACTAA GTTA TCAGCTTC AATGACAAGTATGAG LSA0485 503212 - 504135 + | hypothetical protein pgsA 504161 - 504745 + | CDP-diacylglycerol--glycerol-3-phosphate3-phospha tidyltransferase TERM 776 504755 - 504775 + F 91 -5.4 -5.7946 | gap 1, opp_overlap 504750 504747 504755 AAATAATCAACAAAA CTGG-TCGC TAAA GCGGGCCAG TTTTTTTATTGGCAA TERM 777 504965 - 504949 - g 80 -8.7 -3.90949 | overlap 504946 AAAGATGAAAGACAA GCAGCAC TTG ATGCTGC CCTAAAGAAGATTGA recA 504928 - 505995 + | recombinase A TERM 778 506007 - 506045 + F 100 -19 -4.26188 | opp_overlap 506007 505998 505997 ATAAAGCATGACCAA CAGGAGCCAGGCCAAAAC TTA GTTTTGTACTGGCTCCTG TTTTAGGTATATCCG TERM 779 506045 - 506007 - f 100 -19 -3.26874 | opp_overlap 506007, overlap 505998 505997 ATAAAGCATGACCAA CAGGAGCCAGGCCAAAAC TTA GTTTTGTACTGGCTCCTG TTTTAGGTATATCCG TERM 780 506349 - 506333 - f 70 -8.1 -3.36658 | opp_overlap 506333, overlap 506332 AACATCTTTAAAAAT TTGCAAT GTG ATTGCAA TTTAAAATTTTTGAT TERM 781 506333 - 506349 + F 74 -8.1 -3.81062 | opp_overlap 506333 506332 AACATCTTTAAAAAT TTGCAAT GTG ATTGCAA TTTAAAATTTTTGAT TERM 782 507024 - 507010 - g 71 -8.6 -3.53563 | opp_overlap 507005 507004 ATATGGTTGCCGAAA CAACAG TGA CTGTTG TGACGCTTCCTAATG LSA0489 506382 - 507947 + | putative metal-dependent phosphohydrolase precursor TERM 783 507968 - 507998 + F 91 -6.2 -5.58209 | gap 1 AGTGAGTATATTCTT GGGGGTG-GGCAA TTAAAT TTGTCGCACCCTC TTTTTTTGAATTTCA tagO 508094 - 509191 + | undecaprenyl-phosphate N-acetyl-glucosaminyl transferase TERM 784 509177 - 509213 + T 95 -14.7 -2.50514 | opp_overlap 509180 509185, overlap 509185 TTAAAACCTAAAGAC GAAGAAAAGGATTAGCC ACT GGCTAATCCTTTTTTTG ATGGTTATTTTTGAT TERM 785 509210 - 509180 - T 100 -14.2 -3.48703 | opp_overlap 509177 509185, overlap 509185 AAACCTAAAGACGAA GAAAAGGATTAGCC ACT GGCTAATCCTTTTT TTGATGGTTATTTTT TERM 786 509185 - 509205 + T 100 -14.1 -5.58074 | opp_overlap 509185 509180, overlap 509177 TAAAGACGAAGAAAA GGATTAGCC ACT GGCTAATCC TTTTTTTGATGGTTA TERM 787 509205 - 509185 - T 100 -14.1 -4.81163 | opp_overlap 509177 509185, overlap 509180 TAAAGACGAAGAAAA GGATTAGCC ACT GGCTAATCC TTTTTTTGATGGTTA LSA0491 509883 - 509218 - | hypothetical protein TERM 788 509406 - 509430 + g 73 -10 -3.04715 | overlap 509405 ATTGAATATCCTGAG CGGTTAGCGC TAGTT GCGCTAAGCG ATTTTGAAGGGAGTC TERM 789 510326 - 510308 - g 88 -6.7 -5.19879 | gap 1, overlap 510321 GTTCAAACACAAAAA CGGCACGT ATTA ACG-GCCG TGACCGGTGCAGGGA LSA0492 509945 - 511282 + | putative type II secretion/competence system, ATP-dependent DNA helicase ComFA-like LSA0493 511282 - 511953 + | putative type II secretion/competence system, protein ComFC-like TERM 790 511934 - 511959 + F 79 -4.8 -5.08878 | opp_overlap 511929 AAGCTACAATTAATG CGATTACTTT AGCCAG ATAGTAATCG TTTTATTTGTCTATT LSA0494 512080 - 512625 + | 30S ribosomal interface protein S30EA TERM 791 512646 - 512691 + F 100 -15 -4.65933 | opp_overlap 512643 512653, overlap 512650 TTTAAATAGACATCG TGAAGGACTCGAGACAAACA AAATAG TGTTTGTTTCGAGCCCTTTA TTTATTTTCAGAATA TERM 792 512650 - 512687 + F 100 -13.6 -4.8743 | opp_overlap 512643 512653, overlap 512646 AATAGACATCGTGAA GGACTCGAGACAAACA AAATAG TGTTTGTTTCGAGCCC TTTATTTATTTTCAG TERM 793 512684 - 512653 - f 76 -10.3 -2.7317 | opp_overlap 512650 512646, overlap 512643 AGACATCGTGAAGGA CTCGAGACAAACA AAATAG TGTTTGTTTCGAG CCCTTTATTTATTTT secA 512874 - 515237 + | preprotein translocase subunit SecA TERM 794 515246 - 515269 + F 90 -7.4 -5.15634 | opp_overlap 515246 515258 ACGCTAATTAACGAA TGGCTGAGGC AATT GACTTAGCCA TTTTTTAATGGCATG prfB 515425 - 516423 + | peptide chain release factor 2 ftsE 516554 - 517240 + | cell-division associated ABC transporter, ATP binding FtsE subunit ftsX 517206 - 518117 + | cell-division associated ABC transporter, membrane FtsX subunit TERM 795 518144 - 518171 + F 100 -12.8 -5.16472 | opp_overlap 518144 ACTGATTTACAAAAA GGAATCTCAGCT TTTT AGCTGGGGTTCC TTTTTTAGCGTTTTT TERM 796 518171 - 518144 - f 95 -8.4 -4.88067 | opp_overlap 518144 ACTGATTTACAAAAA GGAATCTCAGCT TTTT AGCTGGGGTTCC TTTTTTAGCGTTTTT TERM 797 518787 - 518757 - g 74 -6.8 -4.36914 | TGGCTTTTTACAAAA GTGGGATGCCACTA AGG TGGTGACACCACAC GTCATCACTAGCAGT TERM 798 518873 - 518898 + G 79 -8.3 -4.10161 | opp_overlap 518880, overlap 518863 TCTTTTTAGTACCAG GCACTAATCAG TTAC CTGATTGGGGC TTTTGGCCAGTCCTA TERM 799 519010 - 519033 + G 75 -8.2 -3.83066 | overlap 518995 519011 TCAGCGTTAGTGACG CGTGATTTGC GAAC GCAAATCACA TTTGGTGGTGTAATT TERM 800 519011 - 519032 + G 81 -11.7 -2.89117 | overlap 518995 519010 CAGCGTTAGTGACGC GTGATTTGC GAAC GCAAATCAC ATTTGGTGGTGTAAT LSA0499 518311 - 519444 + | integral membrane protein LSA0500 519464 - 520177 + | two-component response regulator transcriptional regulator TERM 801 520198 - 520218 + G 100 -12.7 -3.67588 | opp_overlap 520197 520196 520200, overlap 520214 TGAGATTTTATAAGC TAGCCACTA TTT TAGTGGCTA TTTACATAGCCTTTA TERM 802 520216 - 520200 - g 76 -10.9 -2.60257 | opp_overlap 520198 520214, overlap 520197 520196 AGATTTTATAAGCTA GCCACTA TTT TAGTGGC TATTTACATAGCCTT TERM 803 520214 - 520229 + G 86 -7.6 -4.74518 | opp_overlap 520200 520197 520196, overlap 520198 AGCCACTATTTTAGT GGCTAT TTAC ATAGCC TTTATTTTGCTCATT LSA0501 520164 - 521825 + | two-component sensor histidine kinase transcriptional regulator pstS 521918 - 522778 + | phosphate ABC transporter substrate-binding protein pstC 522788 - 523711 + | phosphate ABC transporter transmembrane protein ptsA 523711 - 524595 + | phosphate ABC transporter transmembrane protein pstB1 524605 - 525414 + | phosphate ABC transporter ATP-binding protein pstB2 525435 - 526193 + | phosphate ABC transporter ATP-binding protein LSA0507 526210 - 526887 + | phosphate transporter PhoU TERM 804 526967 - 526929 - f 82 -11.8 -2.83715 | opp_overlap 526939 526942, overlap 526942 CTGAGGATTAGCATA GCTCCGTAAATAACCGAT GCA ATCGGTTGTTTGAGGAGC AGGGTTAAGCGCAGG TERM 805 526939 - 526957 + F 72 -8.2 -3.53091 | opp_overlap 526929 526942, overlap 526942 GCATAGCTCCGTAAA TAACCGAT GCA ATCGGTTG TTTGAGGAGCAGGGT TERM 806 526942 - 526954 + F 74 -7.7 -3.90744 | opp_overlap 526929 526942, overlap 526939 TAGCTCCGTAAATAA CCGAT GCA ATCGG TTGTTTGAGGAGCAG TERM 807 526954 - 526942 - f 74 -7.7 -3.9122 | opp_overlap 526942 526939, overlap 526929 TAGCTCCGTAAATAA CCGAT GCA ATCGG TTGTTTGAGGAGCAG TERM 808 527035 - 527068 + F 78 -5.4 -4.946 | gap 2, opp_overlap 527035 TCGCCAATCAAAAAA GGGGCGGTAGACAAAA GTAA TTTTGTC--CCACCCC TTTTTAATGTTTAAT TERM 809 527068 - 527035 - f 95 -7.6 -5.26875 | gap 2, opp_overlap 527035 TCGCCAATCAAAAAA GGGGCGGTAGACAAAA GTAA TTTTGTC--CCACCCC TTTTTAATGTTTAAT LSA0508 527101 - 527571 + | putative nucleoside deoxyribosyltransferase TERM 810 527625 - 527594 - f 100 -11 -4.81249 | gap 1, opp_overlap 527595 527596 527622, overlap 527595 527596 TTTCAAACTGAAAAA GTCCCGTCTGAATTA TGA TAATTCGGACGGG-C TTTTTTAATGCCCTT TERM 811 527625 - 527595 - f 84 -11.2 -3.48026 | opp_overlap 527595 527596 527622, overlap 527594 527596 TTCAAACTGAAAAAG TCCCGTCTGAATTA TGA TAATTCGGACGGGC TTTTTTAATGCCCTT TERM 812 527595 - 527625 + F 100 -13.4 -5.16237 | opp_overlap 527594 527595 527596, overlap 527596 527622 TTCAAACTGAAAAAG TCCCGTCTGAATTA TGA TAATTCGGACGGGC TTTTTTAATGCCCTT TERM 813 527596 - 527624 + F 100 -16.9 -3.68658 | opp_overlap 527596 527594 527595, overlap 527595 527622 TCAAACTGAAAAAGT CCCGTCTGAATTA TGA TAATTCGGACGGG CTTTTTTAATGCCCT TERM 814 527624 - 527596 - f 95 -14.7 -2.68093 | opp_overlap 527595 527596 527622, overlap 527594 527595 TCAAACTGAAAAAGT CCCGTCTGAATTA TGA TAATTCGGACGGG CTTTTTTAATGCCCT kbl 527761 - 528948 + | 2-amino-3-ketobutyrate coenzyme A ligase LSA0510 528968 - 529231 + | L-threonine dehydrogenase (N-terminal fragment), authentic frameshift LSA0511 529250 - 529915 + | L-threonine dehydrogenase (C-terminal fragment), authentic frameshift TERM 815 529950 - 529926 - f 74 -8.5 -3.76492 | opp_overlap 529927, overlap 529927 529929 TCTAATTGTAGTAAA GGACCGGGC CCCAATC GCCCGGTCT TTTTTATGTCCCAAC TERM 816 529927 - 529949 + F 100 -12 -5.36441 | opp_overlap 529926 529927 529929 CTAATTGTAGTAAAG GACCGGGC CCCAATC GCCCGGTC TTTTTTATGTCCCAA TERM 817 529949 - 529927 - f 84 -12 -2.85574 | opp_overlap 529927, overlap 529926 529929 CTAATTGTAGTAAAG GACCGGGC CCCAATC GCCCGGTC TTTTTTATGTCCCAA TERM 818 529947 - 529929 - f 70 -8.8 -2.97439 | opp_overlap 529927, overlap 529927 529926 AATTGTAGTAAAGGA CCGGGC CCCAATC GCCCGG TCTTTTTTATGTCCC TERM 819 530607 - 530573 - g 70 -9.4 -2.78371 | opp_overlap 530579, overlap 530572 CAGATGGCGAAGAAT CAATGGTCTGAAAAGC TAG GCCTTTCAGATGATTG GAAAGAAAATGCCAG LSA0512 530102 - 531577 + | hypothetical protein TERM 820 531654 - 531640 - g 70 -7.1 -3.74516 | opp_overlap 531640 TAAATCAAGAGATAA CCGGA TGATT TCCGG TGTAATGGGTGGGAT LSA0513 531605 - 531841 + | putative stress-responsive transcriptional regulator LSA0514 531841 - 532113 + | putative small extracellular protein precursor TERM 821 532376 - 532394 + G 70 -5.2 -4.4715 | overlap 532355 532377 TTCAGGGAGCACCTT CCCGAACG TTA CGTTTGGC TTTTCTGGATTAGGC TERM 822 532377 - 532393 + G 71 -8.7 -3.27808 | overlap 532355 532376 TCAGGGAGCACCTTC CCGAACG TTA CGTTTGG CTTTTCTGGATTAGG LSA0515 532113 - 532487 + | integral membrane protein TERM 823 532491 - 532525 + F 100 -11.7 -4.788 | gap 1, opp_overlap 532491 532495, overlap 532495 GAGTGTTATTAATGA TAAAGCCTGC-ATCAG AATT TTGATGGCAGGCTTTA TTTTTAGATTAATTT TERM 824 532525 - 532491 - f 79 -11 -2.78216 | gap 1, opp_overlap 532491 532495, overlap 532495 GAGTGTTATTAATGA TAAAGCCTG-CATCA GAATTT TGATGGCAGGCTTTA TTTTTAGATTAATTT TERM 825 532495 - 532521 + F 95 -8.1 -4.91473 | gap 1, opp_overlap 532491 532495, overlap 532491 GTTATTAATGATAAA GCCTGC-ATCAG AATT TTGATGGCAGGC TTTATTTTTAGATTA TERM 826 532521 - 532495 - f 73 -7.4 -4.08144 | gap 1, opp_overlap 532495 532491, overlap 532491 GTTATTAATGATAAA GCCTG-CATCA GAATTT TGATGGCAGGC TTTATTTTTAGATTA TERM 827 533196 - 533216 + G 71 -6.9 -4.09739 | overlap 533199 AAGATGAACGGACGG TTGTTGGTG AAG CACCAATGA TTTTGCGGCACTTAC hprK 532625 - 533566 + | HPr kinase/phosphorylase TERM 828 533607 - 533653 + F 91 -6.2 -5.64006 | gap 2 TAGTAGGTCATCTGA CTAGATTGAG--CTATACTGTT ATAAA GACAGGATAGTACTCAATCTAG TTTTTTTAATTGAAT lgt 533685 - 534521 + | prolipoprotein diacylglyceryl transferase gpsA 534539 - 535561 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase LSA0519 535680 - 536081 + | hypothetical protein TERM 829 536097 - 536127 + F 100 -3.4 -6.15828 | gap 1 CTATAAATGTAGAAA GTTCACTAA-CTG GGCAAA CAGTTTGGTGGAC TTTTTTTTTAATAAC trxB2 536198 - 537118 + | thioredoxin reductase TERM 830 537149 - 537177 + F 100 -13.2 -5.48303 | opp_overlap 537149, overlap 537176 GCTATACCAATGAAA GCGCCGGTCCAT AAAAA ATGGATCGGTGC TTTTTTTAAGCTTCT TERM 831 537177 - 537149 - f 80 -8.8 -3.98282 | opp_overlap 537149 537176 GCTATACCAATGAAA GCGCCGGTCCAT AAAAA ATGGATCGGTGC TTTTTTTAAGCTTCT TERM 832 538323 - 538305 - g 75 -8.8 -3.59634 | ACAAGCAAGTAAAGA TGCAGGCA CAT TGCCAGCA AACGCTGCTGCGGTT pgm 537274 - 538998 + | phosphoglucomutase TERM 833 539067 - 539094 + F 74 -4.9 -4.84359 | opp_overlap 539067 AATAAGTGCAACAAA TAGGCGGACTA TATCGT TAGTCGGTCTA TTTTTGTAAGAATGG LSA0522 539123 - 539755 + | hypothetical protein TERM 834 539887 - 539928 + F 100 -13.3 -4.38712 | gap 1, opp_overlap 539887 539890 539891, overlap 539891 AAATGCGTCATTTAA GAAGGTGTCTGGTACAAAAC CCC GTTTTGTATCAGGCGC-TTC TTTTATCGCAATAAA TERM 835 539891 - 539925 + F 100 -15.2 -4.31397 | opp_overlap 539890 539887 539891, overlap 539887 GCGTCATTTAAGAAG GTGTCTGGTACAAAAC CCC GTTTTGTATCAGGCGC TTCTTTTATCGCAAT uvrB 539963 - 541966 + | excinuclease ABC subunit B TERM 836 542486 - 542475 - g 88 -3 -5.80817 | GGCAACACAAAAAAA TCTT CGAG AAGA TTCAGCGTGAAGGCT uvrA1 541976 - 544828 + | excinuclease ABC subunit A TERM 837 544836 - 544859 + F 100 -11.8 -5.16237 | AAGAATAAGTATTGG GCTGAGGTCA ATGT TGATCTCAGC TTTTTTGATGGGCTT TERM 838 545468 - 545453 - g 71 -9 -3.34013 | opp_overlap 545465 GATTGTTGGAATCAA CGCGAT TGTT ATCGCG ATTGCGCGTCGGTTA LSA0525 544950 - 545486 + | integral membrane protein TERM 839 545495 - 545523 + F 100 -9 -5.34055 | opp_overlap 545490 545495 545497 GTTATAAAATGAAAA GTCTAGAACAAC ATTCA GTTGTTTTAGGC TTTTTTAATGTTTAT TERM 840 545523 - 545495 - f 71 -4.6 -4.73108 | opp_overlap 545495, overlap 545490 545497 GTTATAAAATGAAAA GTCTAGAACAAC ATTCA GTTGTTTTAGGC TTTTTTAATGTTTAT LSA0526 545612 - 546496 + | hypothetical protein TERM 841 546566 - 546577 + G 70 -7.2 -3.79678 | TGATTGGTGGTGGGA CGGG ACTC CCCG TTATTCTAAAAAGTT TERM 842 546641 - 546606 - g 73 -5.4 -4.65916 | gap 1, opp_overlap 546608 546617, overlap 546607 546608 TTTACGTGAACAAAA TGCGGATGCGACCGCCA TTG TAACGGTCGCAGACG-A TGGTGGTTCATCTGG TERM 843 546640 - 546608 - g 74 -10.5 -2.62958 | opp_overlap 546608 546617, overlap 546606 546607 TACGTGAACAAAATG CGGATGCGACCGCCA TTG TAACGGTCGCAGACG ATGGTGGTTCATCTG LSA0527 546493 - 547527 + | putative extracellular lipase/esterase precursor TERM 844 547574 - 547560 - g 84 -2.8 -5.64006 | AGTGAAGTAAAAAAA GAGCTA ACG CAACTC GAAGTACATCCAGAA TERM 845 547641 - 547655 + G 81 -7.2 -4.65933 | opp_overlap 547628 547624, overlap 547628 547624 AATGGTTCATTAAGC TTGATG AAC CATCAA TTTGTTTTGAACGTG TERM 846 547682 - 547701 + G 100 -13.6 -4.20981 | opp_overlap 547682 CGTGCAGACAGAAAA TCCGGCGA TCGC TCGCCGGA TTTATAGTTTATTGA TERM 847 547701 - 547682 - g 100 -13.6 -4.60797 | opp_overlap 547682 CGTGCAGACAGAAAA TCCGGCGA TCGC TCGCCGGA TTTATAGTTTATTGA LSA0528 547530 - 548474 + | hypothetical protein LSA0529 548567 - 549022 + | MarR family transcriptional regulator TERM 848 549090 - 549047 - T 100 -11.9 -4.63527 | opp_overlap 549051 549080 549083, overlap 549051 CGATGAGTGCAAAAA TTAAGCGGTCAAAATCCTT GTTGTA AAGGATCTTGACCGCTTTT TATATTAAAAAGCGC TERM 849 549051 - 549086 + T 100 -14.9 -5.0916 | opp_overlap 549051 549047, overlap 549080 549083 GAGTGCAAAAATTAA GCGGTCAAAATCCTT GTTGTA AAGGATCTTGACCGC TTTTTATATTAAAAA TERM 850 549086 - 549051 - T 100 -17.1 -3.81926 | opp_overlap 549051 549080 549083, overlap 549047 GAGTGCAAAAATTAA GCGGTCAAAATCCTT GTTGTA AAGGATCTTGACCGC TTTTTATATTAAAAA TERM 851 549102 - 549130 + T 90 -8.8 -4.68209 | opp_overlap 549102, overlap 549083 549080 549104 TTTTTATATTAAAAA GCGCGTCCTTGA GTAAA TCAGGGGCGCAC TTTATTTATTGAGCT TERM 852 549130 - 549102 - T 80 -6.6 -4.8048 | opp_overlap 549083 549080 549102 549104 TTTTTATATTAAAAA GCGCGTCCTTGA GTAAA TCAGGGGCGCAC TTTATTTATTGAGCT TERM 853 549104 - 549128 + T 74 -10 -2.63182 | opp_overlap 549102, overlap 549083 549080 549102 TTTATATTAAAAAGC GCGTCCTTGA GTAAA TCAGGGGCGC ACTTTATTTATTGAG LSA0530 549660 - 549136 - | hypothetical protein TERM 854 549710 - 549744 + r 78 -8.6 -3.79787 | opp_overlap 549712, overlap 549712 AAATACGCAGCAAAA AAGGACACCACAAG GATTAAA CTTGAGGTGTCCTG TTTGAATTAATGTCC TERM 855 549712 - 549742 + r 84 -11.2 -3.47928 | opp_overlap 549712, overlap 549710 ATACGCAGCAAAAAA GGACACCACAAG GATTAAA CTTGAGGTGTCC TGTTTGAATTAATGT TERM 856 549742 - 549712 - R 100 -11.2 -5.17353 | opp_overlap 549712 549710 ATACGCAGCAAAAAA GGACACCACAAG GATTAAA CTTGAGGTGTCC TGTTTGAATTAATGT TERM 857 549842 - 549809 - R 100 -10.5 -4.98531 | opp_overlap 549809 CGGTTAAACTAAAAA TGGCAATCATGGT TGAAAAAT ACCATAATTGCCA TTTTTGTTAATCCTC TERM 858 549809 - 549842 + r 100 -8.3 -5.15167 | opp_overlap 549809 CGGTTAAACTAAAAA TGGCAATCATGGT TGAAAAAT ACCATAATTGCCA TTTTTGTTAATCCTC clpP 550468 - 549884 - | ATP-dependent Clp protease proteolytic subunit TERM 859 550436 - 550416 - G 72 -7.6 -3.78607 | gap 1, opp_overlap 550414 550412, overlap 550414 AGACGAGAATAAATA TCGTAGGCG CGTT CGCC-ACGA GATGTTTGTTCGATA TERM 860 550923 - 550958 + r 81 -9.3 -3.65812 | gap 2, opp_overlap 550919 550926 550929, overlap 550925 550929 AATATGCGAAATTAA TT-A-GAAGGCCACCTA GGAA TAGGTGGCCTTCGTCAA TTCTATTAGAAAACG TERM 861 550925 - 550954 + r 95 -15.1 -2.66255 | opp_overlap 550919 550926 550929, overlap 550923 550929 TATGCGAAATTAATT AGAAGGCCACCTA GGAA TAGGTGGCCTTCG TCAATTCTATTAGAA TERM 862 550953 - 550926 - R 100 -18.6 -2.89837 | opp_overlap 550925 550923 550929, overlap 550919 550929 ATGCGAAATTAATTA GAAGGCCACCTA GGAA TAGGTGGCCTTC GTCAATTCTATTAGA TERM 863 550950 - 550929 - R 100 -14.5 -3.58914 | opp_overlap 550925 550923 550929, overlap 550926 550919 CGAAATTAATTAGAA GGCCACCTA GGAA TAGGTGGCC TTCGTCAATTCTATT TERM 864 550929 - 550950 + r 100 -14.5 -3.24827 | opp_overlap 550929 550926 550919, overlap 550925 550923 CGAAATTAATTAGAA GGCCACCTA GGAA TAGGTGGCC TTCGTCAATTCTATT TERM 865 550964 - 551009 + r 100 -23.7 -3.59087 | opp_overlap 550972, overlap 550972 CCTTCGTCAATTCTA TTAGAAAACGCCTGGTATCGG TTAA TCGATATCAGGCGTTTTCTAA TTTAAGCATCATATT TERM 866 550972 - 551001 + r 100 -15.1 -4.61566 | opp_overlap 550972, overlap 550964 AATTCTATTAGAAAA CGCCTGGTATCGG TTAA TCGATATCAGGCG TTTTCTAATTTAAGC TERM 867 551001 - 550972 - R 100 -12.2 -4.47328 | opp_overlap 550972 550964 AATTCTATTAGAAAA CGCCTGGTATCG GTTAAT CGATATCAGGCG TTTTCTAATTTAAGC LSA0532 551592 - 551011 - | putative N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase) TERM 868 552123 - 552097 - g 84 -11.7 -3.11732 | gap 1 GCGAAATCCATTTAA CAC-AGCCGCAT CCGG ATGCGGCTAGTG AATCAGCTGTTGATT TERM 869 552260 - 552228 - g 71 -5 -4.67353 | gap 1, opp_overlap 552228 CTAGCGATTCAAAAA GATTTG-CCAACACT GCAA AAAGTTGGACAAATC GTTATCATGGGGGGC iunH2 551808 - 552767 + | inosine-uridine preferring nucleoside hydrolase TERM 870 552812 - 552866 + F 85 -3.9 -5.64274 | gap 2, opp_overlap 552827, overlap 552826 TTGGAGGTCGTATAT TAGCATTAAAATAAGCGCCTGTGGCTA ATT TAGTCATGGGGGCTT-TTTT-GTGTTA TTTTTTTATAACTAA TERM 871 552826 - 552854 + F 100 -8.1 -5.57729 | opp_overlap 552827, overlap 552812 TTAGCATTAAAATAA GCGCCTGTGGCTA ATT TAGTCATGGGGGC TTTTTTGTGTTATTT TERM 872 553364 - 553344 - g 75 -10.4 -2.78018 | opp_overlap 553347, overlap 553341 ATCTTTTACCAATTA CACCCGGG GATAT CCCAGGTG TTAAGCCGTTATTTG TERM 873 556171 - 556156 - g 71 -8.2 -3.45118 | TGATCTGACAACGAA CCCAGC ACCA GCCGGG ACAACTTTTGAAGCA TERM 874 556917 - 556895 - g 74 -10 -3.15663 | overlap 556899 ACTGAGGGTGATCAA TTAACGGTTA AGG TAACCGCTAA GAATAGTATTTATAC TERM 875 558712 - 558697 - g 74 -7.6 -4.01381 | AGGGAATTCAAACAA CGTCAA TAAT TTGACG AATAACGGATCGAAT LSA0534 552959 - 558922 + | hypothetical protein TERM 876 558951 - 558971 + F 95 -8.3 -4.91084 | opp_overlap 558952, overlap 558952 TAATGCCACAAAAAA AGGTGATCA TGA TGATCACCC TTTTTGCATTTTCTT TERM 877 558952 - 558970 + F 87 -11.8 -3.5221 | opp_overlap 558952, overlap 558951 AATGCCACAAAAAAA GGTGATCA TGA TGATCACC CTTTTTGCATTTTCT TERM 878 558970 - 558952 - f 100 -11.8 -5.63504 | opp_overlap 558952 558951 AATGCCACAAAAAAA GGTGATCA TGA TGATCACC CTTTTTGCATTTTCT TERM 879 559337 - 559282 - f 100 -20 -3.59979 | opp_overlap 559287 559289, overlap 559283 559289 GGTTTTTATGCGAAA GCAAAAATGCGAGGTAAAAAGTCGCT GAGT AGCGGCCCTTTACCTCGCATCTTTGG TTGGCCAGCTATTGG TERM 880 559336 - 559283 - f 100 -23.5 -2.75844 | opp_overlap 559287 559289, overlap 559282 559289 GTTTTTATGCGAAAG CAAAAATGCGAGGTAAAAAGTCGCT GAGT AGCGGCCCTTTACCTCGCATCTTTG GTTGGCCAGCTATTG TERM 881 559287 - 559332 + F 100 -14.1 -3.90291 | opp_overlap 559283 559282 559289, overlap 559289 TTATGCGAAAGCAAA AATGCGAGGTAAAAAGTCGCT GAGT AGCGGCCCTTTACCTCGCATC TTTGGTTGGCCAGCT TERM 882 559289 - 559330 + F 100 -16.7 -3.54146 | opp_overlap 559283 559282 559289, overlap 559287 ATGCGAAAGCAAAAA TGCGAGGTAAAAAGTCGCT GAGT AGCGGCCCTTTACCTCGCA TCTTTGGTTGGCCAG TERM 883 559330 - 559289 - f 100 -18.9 -4.99134 | opp_overlap 559289 559287, overlap 559283 559282 ATGCGAAAGCAAAAA TGCGAGGTAAAAAGTCGCT GAGT AGCGGCCCTTTACCTCGCA TCTTTGGTTGGCCAG TERM 884 559368 - 559398 + F 82 -11.4 -2.7663 | overlap 559367 559377 GAGATAGCGACCTTG CAATTGAAGTTCTT GGG AGGAATTTCAATTG ATTGCTTATTATTAG TERM 885 560232 - 560214 - g 73 -7.4 -4.18018 | opp_overlap 560213 560215, overlap 560215 TCGTTTGATTCAAAA CCCAACTG AAG CAGTTGGT GATTCATTGGGCTTA TERM 886 560215 - 560231 + G 77 -10.9 -2.84841 | opp_overlap 560214 560215, overlap 560213 CGTTTGATTCAAAAC CCAACTG AAG CAGTTGG TGATTCATTGGGCTT TERM 887 560231 - 560215 - g 79 -10.9 -3.10597 | opp_overlap 560215 560213, overlap 560214 CGTTTGATTCAAAAC CCAACTG AAG CAGTTGG TGATTCATTGGGCTT LSA0536 559648 - 560292 + | hypothetical protein TERM 888 560289 - 560325 + F 78 -9.6 -3.51324 | opp_overlap 560298, overlap 560298 ACCAGAATGGTACCG CTAAAAAAAGAAGGTC ATAGC GACCTTCTTTTTTGTG TTGGATTTTCTTTTG TERM 889 560298 - 560316 + F 100 -8.9 -5.48063 | opp_overlap 560298, overlap 560289 GTACCGCTAAAAAAA GAAGGTC ATAGC GACCTTC TTTTTTGTGTTGGAT TERM 890 560316 - 560298 - f 100 -9.6 -5.42259 | opp_overlap 560298 560289 GTACCGCTAAAAAAA GAAGGTCA TAG CGACCTTC TTTTTTGTGTTGGAT LSA0537 560392 - 560772 + | hypothetical protein LSA0538 560936 - 561682 + | oxidoreductase TERM 891 561709 - 561726 + F 81 -4.1 -5.54885 | ATATTTAATTTAGAA GTCATGT TGAA GCATGGC TTTTTTATTAGTATT LSA0539 561810 - 562055 + | putative NADPH-quinone oxidoreductase (N-terminal fragment), authentic frameshift TERM 892 562602 - 562580 - g 70 -7.8 -3.72592 | opp_overlap 562580, overlap 562583 AATGGTTATCAACAA TTATTGGCAA TGC TTGCCAATCA TCAATTGTGCGCTCA TERM 893 562599 - 562583 - g 71 -9.5 -2.96249 | opp_overlap 562580, overlap 562580 GGTTATCAACAATTA TTGGCAA TGC TTGCCAA TCATCAATTGTGCGC TERM 894 562679 - 562655 - g 100 -8.7 -5.21709 | GCGGATATCAAAAAA GCCCATTTT GATTCGA AAAATGGGC ATTCACAGGGACGGA LSA0540 562052 - 562711 + | putative NADPH-quinone oxidoreductase (C-terminal fragment), authentic frameshift LSA0541 563562 - 562708 - | XRE family DNA-binding protein TERM 895 562742 - 562754 + g 100 -9.1 -5.14563 | opp_overlap 562739 ATATCAAAAATTGTA GCGAG AGT CTCGC TTTTTTGATAAGCAA TERM 896 563639 - 563670 + r 100 -14.6 -4.30448 | opp_overlap 563644, overlap 563644 GTACAAAAGACTCAA AAAAAGCGAGATGC CTAG GCATCTCGCTTTTA TTTTGGATTAGATTT TERM 897 563665 - 563644 - R 100 -14.5 -5.54264 | opp_overlap 563639 563644 AAAGACTCAAAAAAA GCGAGATGC CTAG GCATCTCGC TTTTATTTTGGATTA TERM 898 563644 - 563665 + r 100 -14.5 -5.13343 | opp_overlap 563644, overlap 563639 AAAGACTCAAAAAAA GCGAGATGC CTAG GCATCTCGC TTTTATTTTGGATTA LSA0542 564796 - 563678 - | Aryl-alcohol dehydrogenase TERM 899 564901 - 564890 - R 74 -4.4 -4.90266 | GCTATCAAGTAAAAA GGTT GAAT AACC GGACCCTAAAGCCAT LSA0543 565548 - 564907 - | putative 3-methy-adenine DNA glycosylase I TERM 900 565426 - 565454 + g 81 -11.7 -2.87931 | opp_overlap 565429, overlap 565429 565446 TTCGGTTTCAACGAT TAAGCCACCGAGG GTC CCTTGGTGGCTCG TGTATAACAGGTGAG TERM 901 565429 - 565451 + g 100 -15.6 -2.6927 | opp_overlap 565429, overlap 565426 565446 GGTTTCAACGATTAA GCCACCGAGG GTC CCTTGGTGGC TCGTGTATAACAGGT TERM 902 565451 - 565429 - G 100 -13.4 -3.27298 | opp_overlap 565426 565429 565446 GGTTTCAACGATTAA GCCACCGAGG GTC CCTTGGTGGC TCGTGTATAACAGGT TERM 903 565912 - 565891 - g 73 -3.7 -5.04222 | gap 1, overlap 565893 CAACCAAATGAAAAA CGCC-ACTTG AAT CAAGTCGGTG CCATGACTCAAGGTG LSA0544 565687 - 566559 + | putative drug ABC exporter, ATP-binding subunit LSA0545 566563 - 567306 + | putative drug ABC exporter, membrane-spanning subunit LSA0546 567306 - 567506 + | hypothetical protein LSA0547 567519 - 567800 + | two-component system, sensor histidine kinase (N-terminal fragment), authentic frameshift TERM 904 567806 - 567790 - gf 71 -2.2 -5.1925 | TTATAATCGAAAAAA TCGGCA GTTAA TGCAGA CCAATCAACGATTGA LSA0548 567710 - 568429 + | two-component system, sensor histidine kinase (C-terminal fragment), authentic frameshift LSA0549 568422 - 569027 + | two-component system, response regulator LSA0550 569097 - 569423 + | hypothetical protein TERM 905 569438 - 569468 + F 100 -9.2 -5.08011 | opp_overlap 569438 569440 AAAAGTTACCAAGTA GAGATTTATCTG AAAATAG CAGATAAGTCTC TTTTTTAAGCCTTTT LSA0551 569547 - 571187 + | putative oligopeptide ABC transporter, substrate-binding lipoprotein precursor LSA0552 571267 - 571674 + | organic hydroperoxide resistance protein TERM 906 571681 - 571730 + T 100 -24.7 -5.17576 | opp_overlap 571681 571688, overlap 571688 GTCATGTAAGTTAAA TATAAAAGCGCCGCAACAATCAG AAAT TTGATTGTTGCGGCGCTTTTTTA TTTTTTAAATTAATG TERM 907 571730 - 571681 - T 100 -24 -3.76952 | opp_overlap 571681 571688, overlap 571688 GTCATGTAAGTTAAA TATAAAAGCGCCGCAACAATCA GAAATT TGATTGTTGCGGCGCTTTTTTA TTTTTTAAATTAATG TERM 908 571723 - 571688 - T 100 -22.1 -4.81359 | opp_overlap 571688 571681, overlap 571681 AAGTTAAATATAAAA GCGCCGCAACAATCA GAAATT TGATTGTTGCGGCGC TTTTTTATTTTTTAA TERM 909 571688 - 571723 + T 100 -22.8 -6.04324 | opp_overlap 571681 571688, overlap 571681 AAGTTAAATATAAAA GCGCCGCAACAATCAG AAAT TTGATTGTTGCGGCGC TTTTTTATTTTTTAA LSA0553 572036 - 571740 - | hypothetical protein LSA0555 572242 - 572604 + | hypothetical protein TERM 910 572613 - 572592 - f 91 -11.7 -4.21141 | opp_overlap 572592, overlap 572596 GCTTAATAAAGTAAA GAAACGTCA CTAG TGACGTTTC TTTTTTTGATGCGCT TERM 911 572592 - 572613 + F 100 -11.7 -5.52986 | opp_overlap 572592 572596 GCTTAATAAAGTAAA GAAACGTCA CTAG TGACGTTTC TTTTTTTGATGCGCT TERM 912 572609 - 572596 - f 78 -6.7 -4.66537 | opp_overlap 572592, overlap 572592 AATAAAGTAAAGAAA CGTCA CTAG TGACG TTTCTTTTTTTGATG LSA0556 572733 - 573623 + | putative drug ABC exporter, ATP-binding subunit LSA0557 573623 - 574489 + | putative drug ABC exporter, membrane-spanning subunit LSA0558 574516 - 574968 + | LytR family transcriptional regulator LSA0559 574974 - 575381 + | integral membrane protein TERM 913 575436 - 575386 - T 100 -11.5 -6.04324 | gap 1, opp_overlap 575390, overlap 575390 TGAAAAAATAAAAAA GAAACGCGACTAAAATAACGAATC TTGT GATTCATTGTTT-AGTCGCGTTTT TAGTTTAAACTCTAG TERM 914 575432 - 575390 - T 100 -12.3 -5.29208 | gap 1, opp_overlap 575390, overlap 575386 AAAATAAAAAAGAAA CGCGACTAAAATAACGAATC TTGT GATTCATTGTTT-AGTCGCG TTTTTAGTTTAAACT TERM 915 575390 - 575432 + T 100 -12.3 -4.99134 | gap 1, opp_overlap 575386 575390 AAAATAAAAAAGAAA CGCGACTAAAATAACGAATC TTGT GATTCATTGTTT-AGTCGCG TTTTTAGTTTAAACT LSA0560_a 575788 - 575441 - | putative bacteriocin immunity protein TERM 916 575995 - 575983 - g 73 -2.7 -5.13473 | ATGATATTTAAAAAA CTTTC AGA AAAAG AATTGCAAAAAATAA LSA0560_b 575965 - 576099 + | putative bacteriocin inducing peptide sppKN 576747 - 576956 + | two-component system, sensor histidine kinase, (SppK fragment) (sakacine P production), degenerate sppKC 576893 - 577444 + | two-component system, sensor histidine kinase (SppK fragment) (sakacine pproduction ), degenerate sppR 577446 - 578192 + | two-component system, response regulator SppR (sakacin P production) TERM 917 578197 - 578231 + F 100 -7.4 -5.626 | AAATGATGTAGCGCA TATTAACGTTTGAC AGATAAA GTTGAACGTTAATA TTTTTTTGTAAGATG LSA0564_a 578358 - 578501 + | hypothetical protein LSA0564_b 578523 - 578687 + | hypothetical protein LSA0564_c 578713 - 579381 + | putative bacteriocin immunity protein TERM 918 579400 - 579386 - f 95 -7.2 -5.32882 | TACTATTATAAAAAA GATTAG CGT CTAATC GATAATGAAGTGAAC TERM 919 579402 - 579455 + F 80 -9.8 -3.62032 | opp_overlap 579406 579410, overlap 579403 579406 579410 ATTAGCGTCTAATCG ATAATGAAGTGAACCCCCAAAACT ACTCCA ATTTTTTGGGGTTCACTTCATAAA TTTGGACATTAATCT TERM 920 579403 - 579454 + F 90 -13.3 -2.76737 | opp_overlap 579406 579410, overlap 579402 579406 579410 TTAGCGTCTAATCGA TAATGAAGTGAACCCCCAAAACT ACTCCA ATTTTTTGGGGTTCACTTCATAA ATTTGGACATTAATC TERM 921 579451 - 579406 - f 100 -15 -3.41878 | opp_overlap 579403 579402 579406 579410, overlap 579410 GCGTCTAATCGATAA TGAAGTGAACCCCCAAAACT ACTCCA ATTTTTTGGGGTTCACTTCA TAAATTTGGACATTA TERM 922 579406 - 579451 + F 95 -15 -2.65279 | opp_overlap 579406 579410, overlap 579403 579402 579410 GCGTCTAATCGATAA TGAAGTGAACCCCCAAAACT ACTCCA ATTTTTTGGGGTTCACTTCA TAAATTTGGACATTA TERM 923 579410 - 579447 + F 77 -10 -3.25088 | opp_overlap 579406 579410, overlap 579406 579403 579402 CTAATCGATAATGAA GTGAACCCCCAAAACT ACTCCA ATTTTTTGGGGTTCAC TTCATAAATTTGGAC TERM 924 579447 - 579410 - f 80 -10 -3.47403 | opp_overlap 579410 579406 579403 579402, overlap 579406 CTAATCGATAATGAA GTGAACCCCCAAAACT ACTCCA ATTTTTTGGGGTTCAC TTCATAAATTTGGAC LSA0565 580228 - 580398 + | hypothetical protein LSA0566 580431 - 580613 + | hypothetical protein TERM 925 580694 - 580660 - f 77 -8.1 -3.96093 | opp_overlap 580660, overlap 580650 CATACTAATACCAAA TATTAACGTTTAACC GATAA AGTTGAACGTTAATA TTTTTTTTACTCGAA TERM 926 580660 - 580694 + F 100 -9.6 -5.86061 | opp_overlap 580650 580660 CATACTAATACCAAA TATTAACGTTTAAC CGATAAA GTTGAACGTTAATA TTTTTTTTACTCGAA LSA0567 580755 - 581087 + | hypothetical protein LSA0568 581106 - 581393 + | putative SakacinP immunity protein, SpiA LSA0569_a 581417 - 581596 + | hypothetical protein LSA0569_b 581625 - 581861 + | hypothetical protein TERM 927 581898 - 581932 + T 100 -19.5 -3.84961 | opp_overlap 581898 TTTGAAAGTTAATAA GGGGTTGGGGCAAAA ATAAC TTTTGTCCCAACCCC TTTAATGATTCGCTA TERM 928 581932 - 581898 - T 100 -18 -3.77832 | opp_overlap 581898 TTTGAAAGTTAATAA GGGGTTGGGGCAAAAA TAA CTTTTGTCCCAACCCC TTTAATGATTCGCTA LSA0570 582257 - 581934 - | hypothetical protein LSA0571 582341 - 582625 + | hypothetical protein tdcB 582795 - 583835 + | threonine dehydratase TERM 929 583873 - 583850 - f 100 -15.4 -5.47218 | opp_overlap 583850 GGTTATTTAAAAAAA GGTATCGCGA ATTT TCGCGATACC TTTTTTGACGTTTAT TERM 930 583850 - 583873 + F 100 -15.4 -5.1361 | opp_overlap 583850 GGTTATTTAAAAAAA GGTATCGCGA ATTT TCGCGATACC TTTTTTGACGTTTAT LSA0573 583979 - 584611 + | hypothetical protein LSA0574 585035 - 584598 - | integral membrane protein TERM 931 586335 - 586356 + G 74 -8.1 -4.07568 | gap 1, opp_overlap 586324 586335 586333 586330 586329 AAATTCAAATTAACA TTCGATCCTG AAA CAGG-TCGAA TTTTAGGCGCACAAA npr 585192 - 586544 + | NADH peroxidase TERM 932 586610 - 586644 + F 91 -4.3 -5.79595 | TTAGACTATCAAAAA GGTGTTGCGGTGAAA TAAAT TTTTGCCGAGATACC TTTTTTATTTTGCCA LSA0576 586703 - 586945 + | hypothetical protein LSA0577 586954 - 587193 + | hypothetical protein TERM 933 587206 - 587223 + T 100 -11.3 -5.56264 | opp_overlap 587206 TAGGGTATAAAAAAA CGACCAG TTAG CTGGTCG TTTTTTGTGTTTAGA TERM 934 587223 - 587206 - T 100 -11.3 -5.626 | opp_overlap 587206 TAGGGTATAAAAAAA CGACCAG TTAG CTGGTCG TTTTTTGTGTTTAGA LSA0578 587959 - 587234 - | integral membrane protein LSA0579 588084 - 588956 + | LysR family transcriptional regulator TERM 935 588994 - 588956 - f 100 -15.6 -3.14218 | opp_overlap 588961, overlap 588961 TATTCAGGAAAATTA GAAAACGCATCTATTCCA ATT TAGAATAGATGCGTTTTT AGTTTGAATTGTTCG TERM 936 588989 - 588961 - f 100 -15.5 -4.68539 | opp_overlap 588961, overlap 588956 AGGAAAATTAGAAAA CGCATCTATTCCA ATT TAGAATAGATGCG TTTTTAGTTTGAATT TERM 937 588961 - 588989 + F 100 -13.3 -5.01042 | opp_overlap 588961 588956 AGGAAAATTAGAAAA CGCATCTATTCCA ATT TAGAATAGATGCG TTTTTAGTTTGAATT ubiD 589064 - 590539 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ubiX 590561 - 591151 + | putative 3-octaprenyl 4-hydroxybenzoate carboxylyase LSA0582 591129 - 591554 + | hypothetical protein TERM 938 591579 - 591560 - T 100 -9.4 -5.95539 | opp_overlap 591560 TGCTAAATAAAAAAA GTCATCAT TTTA ATGATGAC TTTTTTTATTATCCA TERM 939 591560 - 591579 + T 100 -9.4 -5.88565 | opp_overlap 591560 TGCTAAATAAAAAAA GTCATCAT TTTA ATGATGAC TTTTTTTATTATCCA glpQ 593369 - 591588 - | glycerophosphodiester phosphodiesterase TERM 940 592018 - 592037 + g 70 -3.6 -4.74801 | overlap 592019 TTATCGGTAGCTGGC GTCTTGAT TTCA ATCAAGAG TTTTTGATGGCGTTG TERM 941 593422 - 593455 + r 100 -13.3 -4.30833 | opp_overlap 593422 TATTGTACAACAAAA GAAGGGTTGAGTAAC AATC GCTACTTAACCCTTC TTTATTAATCATTTA TERM 942 593455 - 593422 - R 100 -13.3 -4.78237 | opp_overlap 593422 TATTGTACAACAAAA GAAGGGTTGAGTAAC AATC GCTACTTAACCCTTC TTTATTAATCATTTA pepD4 594866 - 593460 - | U34 family dipeptidase D TERM 943 594881 - 594869 - H 76 -7.7 -4.18018 | TTCGTTTATTCAAAA GAAGG ACT CCTTC AGGGTTTATTATTTA TERM 944 595646 - 595626 - g 100 -9.8 -4.63218 | TTCTGGGCAACAAAA GCCCAAAA AGCCA TTTTGGGC CAAGTTAAAGTTAAC LSA0585 595035 - 595709 + | hypothetical protein TERM 945 595751 - 595722 - T 100 -20.9 -5.64304 | opp_overlap 595722 TAAGACAACAAAAAA GCCCCGTCGATTT GATC AAATCGACGGGGC TTTTTATTATGATAT TERM 946 595722 - 595751 + T 100 -20.9 -5.2291 | opp_overlap 595722 TAAGACAACAAAAAA GCCCCGTCGATTT GATC AAATCGACGGGGC TTTTTATTATGATAT LSA0586 597044 - 595887 - | site-specific recombinase, prophage lsa1 integrase TERM 947 596262 - 596294 + g 100 -4.1 -6.11229 | CTTTAAATAAAGTAA GGTGCTTTCGTCA AGTGAGA TGACGCGGGTACC TTTTTTTGTTTTGGT TERM 948 596748 - 596762 + g 76 -2.8 -5.39755 | overlap 596737 AAAAGCAGGAAGGAT GTGGTT TTG AAACAC TTTTTTCTGCTTATA TERM 949 596911 - 596951 + g 80 -3.7 -5.31519 | overlap 596923 ATAGATAATGCTAAG CGCGCCTCTTTTCGGGTTT TGA AGCCCCGTCTAGTGGTGCG TTTTTCTTTACCTGT LSA0587 597257 - 597105 - | prophage lsa1 protein LSA0588 597478 - 597221 - | prophage lsa1 protein LSA0589 598355 - 597576 - | prophage lsa1 XRE family DNA-binding protein TERM 950 597772 - 597793 + g 100 -8.7 -4.68705 | overlap 597774 CCAAGGTTAGTTTGC CATTCGCTG AATT CAGCGAACG TTTTATTAAACTTAT TERM 951 597774 - 597791 + g 71 -9.9 -2.6336 | overlap 597772 AAGGTTAGTTTGCCA TTCGCTG AATT CAGCGAA CGTTTTATTAAACTT TERM 952 598236 - 598250 + g 78 -5.7 -4.81685 | CCACGTTTCTAGTTT GGGTT CACGC AACCC TTTTTCGTAGTTACT TERM 953 598443 - 598398 - H 73 -3.3 -5.23292 | opp_overlap 598398 598421 598422, overlap 598414 598431 GTACACAAAATAAAA TGATTATGCAACAAAATGTTG ACAG CAACAAAGTGTTGCGTTATCA TAATTCTTGTTAATG TERM 954 598427 - 598414 - H 73 -5.3 -4.69053 | opp_overlap 598398 598421 598422, overlap 598398 GATTATGCAACAAAA TGTTG ACAG CAACA AAGTGTTGCGTTATC LSA0590 598496 - 598687 + | prophage lsa1 protein LSA0591 598690 - 598962 + | prophage lsa1 protein LSA0592 599053 - 599157 + | hypothetical protein LSA0593 599319 - 599573 + | prophage lsa1 protein TERM 955 600031 - 600019 - g 71 -4.7 -4.65263 | ACGTTCGAAAATAAA CGGCC AAT GGCAG ACCTACCCGAGTGGC LSA0594 599554 - 600354 + | hypothetical protein LSA0595 600345 - 601838 + | putative prophage lsa1 DNA primase LSA0596 602118 - 602510 + | prophage lsa1 protein TERM 956 602581 - 602599 + F 80 -10.3 -3.40371 | TATATGAACGCTTGG CCCCCTA ATATA TAGGGGG TTGGTTAATAACCTG LSA0597 602654 - 602959 + | prophage lsa1 protein LSA0598 602967 - 603104 + | prophage lsa1 protein TERM 957 603125 - 603163 + F 100 -8.9 -4.87626 | GATTGGAGAACCAAA GGGATGCGTTACTGCTA GTAAA TAGCGGTGGTGTGTCCC TTTTTAATATTGGAA LSA0599 603206 - 603628 + | prophage lsa1 protein LSA0600 603696 - 604037 + | prophage lsa1 protein TERM 958 604332 - 604310 - T 74 -7.7 -3.91984 | AGAGGCCCTAAAGAA GGAGTCACC GAATT GACGACTCC TTAAAGATGAGTTAG LSA0601 604695 - 604618 - | prophage lsa1 protein TERM 959 604649 - 604672 + g 73 -7.4 -4.19817 | opp_overlap 604649 TGTTGGGCTAAAAAA GGTTGGTCCA AAAT TGGACAGACC TTTTCCGTGAGTAAG TERM 960 604672 - 604649 - G 78 -5.2 -5.00616 | opp_overlap 604649 TGTTGGGCTAAAAAA GGTTGGTCCA AAAT TGGACAGACC TTTTCCGTGAGTAAG TERM 961 604877 - 604857 - H 76 -9.7 -2.95522 | overlap 604856 GGATAGAAACATAAT GGCGTAACG AAA CGTTACCCC TAAATATAATCTAGA TERM 962 604954 - 604935 - H 73 -8.6 -3.34715 | opp_overlap 604948, overlap 604933 604937 604947 GACCCGTTTGAAACA TATCCCCA AAAC TGGGGACA TCCCCTTATCTAATG TERM 963 604952 - 604937 - H 71 -9 -3.24232 | opp_overlap 604948, overlap 604935 604933 604947 CCCGTTTGAAACATA TCCCCA AAAC TGGGGA CATCCCCTTATCTAA TERM 964 605028 - 605050 + H 85 -9.2 -4.01158 | TAGTATGATCCTTGA CGGTCTATGT TTA ATATAGGCCG TTGTTTAATGAAGTT TERM 965 605101 - 605080 - H 90 -8.7 -4.55798 | opp_overlap 605080 TAGCCCAAATTAAAA GACGGCCAT TAAT ATGACCGCC TGCTGTAAGTTATGT TERM 966 605246 - 605209 - H 100 -8 -5.58522 | opp_overlap 605207 605209 TAGAGAAAAGAAAAA GGTTGATAT-ATCAGTGC CTAA GC-CTGATTATACCAACC TATCTTTTAATGATT LSA0602 605222 - 605341 + | prophage lsa1 protein TERM 967 605339 - 605369 + F 70 -6.5 -4.13343 | gap 1, opp_overlap 605342 605346, overlap 605342 ACTAGCGGCGCAACC TAATATA-TGTACT CAAT AGTACAATATATTA TTTTAGCGGATTTCT cggR 605626 - 606663 + | glycolytic genes regulator TERM 968 607051 - 607026 - g 80 -4.7 -5.2291 | gap 1 ACATCAGAAGAAAAA GCACAAGC-TCA TCT TGATGCCGGTGC TAAAAAAGTTCTTAT gap 606702 - 607718 + | glyceraldehyde 3-phosphate dehydrogenase TERM 969 607760 - 607786 + F 100 -12.3 -5.61596 | opp_overlap 607760 AATAGCATTTTATAA GGCGGGAGGAG GTAAA CTCCTTCCGTC TTTTTTTATGAAAAT pgk 607819 - 609033 + | phosphoglycerate kinase tpiA 609059 - 609814 + | triosephosphate isomerase TERM 970 609913 - 609892 - f 100 -8.1 -5.1287 | gap 1, overlap 609893 609894 CTGACATCCAAAAAA GTGCTGATGA ATA TCATCAGC-C AAAAAAGGAGAAAAT TERM 971 609913 - 609893 - f 74 -8.3 -3.66999 | overlap 609892 609894 TGACATCCAAAAAAG TGCTGATGA ATA TCATCAGCC AAAAAAGGAGAAAAT TERM 972 609912 - 609894 - f 82 -11.8 -2.79476 | overlap 609892 609893 GACATCCAAAAAAGT GCTGATGA ATA TCATCAGC CAAAAAAGGAGAAAA eno 609932 - 611227 + | phosphopyruvate hydratase TERM 973 611312 - 611265 - f 100 -19.5 -2.52516 | gap 1, opp_overlap 611267 611272, overlap 611272 GCTTTGAGGATTAAC CTA-AAAACAGGCGTTACGGTG GTTTT CACCGTGACGCCTGTTTTGTAG TTAACCGGAAAAGAC TERM 974 611267 - 611309 + F 100 -20.8 -2.70932 | opp_overlap 611265 611272, overlap 611272 TTTGAGGATTAACCT AAAAACAGGCGTTACGGTGG TTT TCACCGTGACGCCTGTTTTG TAGTTAACCGGAAAA TERM 975 611272 - 611304 + F 100 -20.7 -4.5442 | opp_overlap 611272 611265, overlap 611267 GGATTAACCTAAAAA CAGGCGTTACGGTGG TTT TCACCGTGACGCCTG TTTTGTAGTTAACCG TERM 976 611304 - 611272 - f 100 -17.8 -4.7629 | opp_overlap 611267 611272, overlap 611265 GGATTAACCTAAAAA CAGGCGTTACGGTG GTTTT CACCGTGACGCCTG TTTTGTAGTTAACCG TERM 977 611411 - 611364 - f 72 -3.7 -5.04987 | gap 2, opp_overlap 611369 611377, overlap 611377 AATATGGCGAAAAAA GCATGTTAAGAAAGGGCATCTCA TTAC TGAGATGCCCTTTTTTT--ATAC TATCGTTGTAACCGT TERM 978 611369 - 611408 + F 100 -16 -2.71763 | opp_overlap 611364 611377, overlap 611377 GGCGAAAAAAGCATG TTAAGAAAGGGCATCTCA TTAC TGAGATGCCCTTTTTTTA TACTATCGTTGTAAC TERM 979 611377 - 611400 + F 100 -15.4 -5.69473 | opp_overlap 611377 611364, overlap 611369 AAGCATGTTAAGAAA GGGCATCTCA TTAC TGAGATGCCC TTTTTTTATACTATC TERM 980 611400 - 611377 - f 100 -15.4 -4.19336 | opp_overlap 611369 611377, overlap 611364 AAGCATGTTAAGAAA GGGCATCTCA TTAC TGAGATGCCC TTTTTTTATACTATC gloAN 611478 - 611744 + | lactoylglutathione lyase (N-terminal fragment), authentic frameshift gloAC 611737 - 611856 + | lactoylglutathione lyase (C-terminal fragment), authentic frameshift TERM 981 611852 - 611908 + T 79 -11.3 -3.05597 | opp_overlap 611849 611858 611870, overlap 611852 611870 TAATTGAATTAACGG TTTAAACCGACAAAAAAAGAGTTAC TTTAAGC GTAACTCTTTTTTTGTTTGGTTAAG ATTTTAAGCGATCAA TERM 982 611852 - 611909 + T 89 -11.1 -4.09864 | gap 1, opp_overlap 611849 611858 611870, overlap 611852 611870 TAATTGAATTAACGG TTTAAACC-GACAAAAAAAGAGTTAC TTTAAGC GTAACTCTTTTTTTGTTTGGTTAAGA TTTTAAGCGATCAAT TERM 983 611902 - 611858 - T 82 -10.3 -3.58305 | opp_overlap 611852 611852 611870, overlap 611849 611870 AATTAACGGTTTAAA CCGACAAAAAAAGAGTTAC TTTAAGC GTAACTCTTTTTTTGTTTG GTTAAGATTTTAAGC TERM 984 611890 - 611870 - T 88 -5.5 -5.68039 | opp_overlap 611870 611852 611852, overlap 611858 AAACCGACAAAAAAA GAGTTAC TTTAAGC GTAACTC TTTTTTTGTTTGGTT TERM 985 611870 - 611890 + T 95 -5.5 -6.01187 | opp_overlap 611858 611870, overlap 611852 611852 AAACCGACAAAAAAA GAGTTAC TTTAAGC GTAACTC TTTTTTTGTTTGGTT LSA0610 612959 - 611904 - | cell surface protein precursor TERM 986 612073 - 612094 + g 71 -8.7 -3.33162 | TCTTGTTGGTTCCAC TTAGCCGCT GCTT GGCGGCTGA TTGTAAAGTGACGTG TERM 987 612217 - 612231 + g 70 -2.8 -4.94992 | ATAACCGAGTTTGGT GCAAAT TGG ACTTGC TTTTTCTCAGTTTGA LSA0611 613678 - 612977 - | cell surface protein precursor TERM 988 613521 - 613539 + g 75 -3.2 -5.08824 | AAGTCTGGAACAGCG GTAATC ACTAATG GATTAC TTTTTTCAGTGAAGA LSA0612 614015 - 613659 - | hypothetical protein LSA0613 615665 - 614037 - | cell surface protein LSA0614 616875 - 615619 - | extracellular protein precursor LSA0615 617065 - 617535 + | ArgR family transcriptional regulator TERM 989 617598 - 617555 - f 100 -15.5 -4.10085 | opp_overlap 617556, overlap 617556 TAAAAATTAATTAAA GGGCGCCAATAAGTTAGGT ATTAAG AACTAACTTATTGGCGCCT TTTTTTCAGGAGATT TERM 990 617597 - 617556 - f 100 -19 -3.04424 | opp_overlap 617556, overlap 617555 AAAAATTAATTAAAG GGCGCCAATAAGTTAGGT ATTAAG AACTAACTTATTGGCGCC TTTTTTTCAGGAGAT TERM 991 617556 - 617597 + F 100 -19 -5.40474 | opp_overlap 617555 617556 AAAAATTAATTAAAG GGCGCCAATAAGTTAGGT ATTAAG AACTAACTTATTGGCGCC TTTTTTTCAGGAGAT LSA0616 617807 - 618958 + | putative glycine/betaine/carnitine/choline ABC transporter, ATP-binding subunit TERM 992 619594 - 619574 - g 84 -6.2 -5.00616 | GTCGTCTTGAAAAAA GAATGACA CCCGT TGCCATTC GCTAAAGGAGGTCGC LSA0617 618973 - 619599 + | putative glycine/betaine/carnitine/choline ABC transporter, membrane-spanning subunit LSA0618 619611 - 620546 + | putative glycine/betaine/carnitine/choline ABC transporter, substrate-binding lipoprotein precursor LSA0619 620543 - 621202 + | putative glycine/betaine/carnitine/choline ABC transporter, membrane-spanning subunit TERM 993 621250 - 621216 - T 100 -21.7 -5.08011 | opp_overlap 621216 AAAAGCGCTAAAAAA GGCGCCAAGACAAAA GCAAA TTTTGTCTTGGCGCC TTTTTTAGATATCCG TERM 994 621216 - 621250 + T 100 -21.7 -5.1287 | opp_overlap 621216 AAAAGCGCTAAAAAA GGCGCCAAGACAAAA GCAAA TTTTGTCTTGGCGCC TTTTTTAGATATCCG rluA1 622208 - 621318 - | pseudouridine synthase, 23S-rRNA-specific TERM 995 622485 - 622495 + G 71 -4 -4.7497 | TGATTTTGGGCATAT TACT TTT AGTA TTTTTCATGAGTAGC pbp2A 622364 - 624445 + | bifunctional glycolsyltransferase/transpeptidase penicillin binding protein 2A LSA0622 624469 - 624813 + | hypothetical protein TERM 996 624865 - 624830 - f 85 -12 -3.03124 | gap 1, opp_overlap 624830, overlap 624833 CCGTATTTTTTAAGA GAAGTATCGAG-TCGCA AAT CGCGAACTCGATGCTTC TTTTTTTAGTGGGAA TERM 997 624830 - 624865 + F 100 -13.5 -5.52384 | gap 1, opp_overlap 624830 624833 CCGTATTTTTTAAGA GAAGTATCGAG-TCGC AAATC GCGAACTCGATGCTTC TTTTTTTAGTGGGAA TERM 998 624862 - 624833 - f 72 -7.9 -3.66288 | gap 1, opp_overlap 624830, overlap 624830 TATTTTTTAAGAGAA GTATCGAG-TCGCA AAT CGCGAACTCGATGC TTCTTTTTTTAGTGG TERM 999 626072 - 626049 - g 76 -2.5 -5.27335 | gap 1, overlap 626053 CTTCTGAAAGAAAAA TTCATCCGAG AAGCA CTCGAA-GAA CCCGATTTTCAAGAT LSA0623 624948 - 626141 + | putative metallo-phosphoesterase TERM 1000 626262 - 626279 + G 78 -4.1 -5.08483 | overlap 626264 626272 GTAAATCAACCATCA CGGCTTT TATC AAAGGCG TTTTGTTTGGTTTTG LSA0624 626144 - 628855 + | hypothetical protein LSA0625 628845 - 629813 + | putative metal-dependent phosphohydrolase TERM 1001 629860 - 629823 - T 100 -22.3 -5.65513 | opp_overlap 629823 GATTAATTAAAAAAA GAGCCTCAACCAAACAG TAAT CTGTTTGATTGAGGCTC TTTTTAGATGTGCTT TERM 1002 629823 - 629860 + T 100 -20.1 -4.72333 | opp_overlap 629823 GATTAATTAAAAAAA GAGCCTCAACCAAACAG TAAT CTGTTTGATTGAGGCTC TTTTTAGATGTGCTT prsA 630785 - 629874 - | peptidylprolyl isomerase TERM 1003 630761 - 630773 + g 75 -3.3 -5.20216 | overlap 630762 TTAATAGACTGGCAG CGGCT AAT AGCCA TTTTTTCATCATATG LSA0627 631274 - 630948 - | hypothetical protein LSA0628 631705 - 631277 - | putative diadenosine polyphosphate hydrolase TERM 1004 632305 - 632323 + G 95 -9.6 -4.56775 | opp_overlap 632304 GACTCGACAATAAGC TGGACTGG TTC CCAGTTCA TTTTTCAAAAGGGAT LSA0629 631926 - 632654 + | putative drug ABC exporter, ATP-binding subunit LSA0630 632654 - 633856 + | putative drug ABC exporter, membrane-spanning/permease subunit TERM 1005 633942 - 633961 + F 90 -8.6 -4.49377 | gap 1, opp_overlap 633939 CAGTTGAAGCAACGC GGTGCC-AC GGG GTAGGCACC TTATTTTATTGTAAA TERM 1006 634354 - 634383 + G 70 -2.9 -5.00616 | gap 1, overlap 634355 GCAAACCTACTTCTA TGAT-TTACCGCAA GAT TTGCGGCAACATCC TTTTTTAGCACAAAC LSA0631 633989 - 634783 + | aminoglycoside phosphotransferase TERM 1007 634924 - 634957 + F 95 -10.3 -4.4078 | TCCTAATCAGATTGC GGGGCCGAGACAAAA TGAC TTTTGTCCCAGCCTC TTTTAATTGGCAGCA TERM 1008 635084 - 635065 - g 70 -5.8 -4.4009 | gap 1, opp_overlap 635065, overlap 635067 635077 GGTGAGCCCAGAAAA TATTGCCAG TAA CTGGCAA-A GTCGTTTTGCCAAGG TERM 1009 635083 - 635067 - g 88 -10.9 -3.80877 | opp_overlap 635065, overlap 635065 635077 TGAGCCCAGAAAATA TTGCCAG TAA CTGGCAA AGTCGTTTTGCCAAG LSA0632 634988 - 635629 + | tRNA (guanine-N7)-methyltransferase TERM 1010 635657 - 635698 + T 100 -19.2 -4.21936 | opp_overlap 635667, overlap 635667 AATAACCGCTCAAGC CAAATAAAAACACTTACC AATTTC GGTAAGTGTTTTTATTTG TTTTAAAGTTGTGAA TERM 1011 635688 - 635667 - T 100 -9.5 -5.33026 | opp_overlap 635667 635657 CAAGCCAAATAAAAA CACTTACCA ATTT CGGTAAGTG TTTTTATTTGTTTTA TERM 1012 635667 - 635688 + T 100 -8.8 -5.59962 | opp_overlap 635667, overlap 635657 CAAGCCAAATAAAAA CACTTACC AATTTC GGTAAGTG TTTTTATTTGTTTTA LSA0633 636027 - 635701 - | putative small extracellular protein precursor TERM 1013 635806 - 635817 + g 70 -3.6 -4.77173 | opp_overlap 635792 ACCGCCTTGATAAAC CGGG AAAG TCCG TTTGTTTTGTGAAAA trxA4 636150 - 636470 + | thioredoxin TERM 1014 636693 - 636709 + G 75 -8.7 -3.64822 | GTCCAAGCCCTCAGT GTTGCGG ATG TCGCAAC TTTAAATCAAGCACT LSA0635 636489 - 637118 + | putative aminoacyl-tRNA synthetase TERM 1015 637172 - 637219 + F 89 -7.5 -4.93595 | opp_overlap 637172 637177 637180, overlap 637173 TAAAATAGTATGATA GTAAATAACAATTAATTAG TTAACATCGT CTAATTAATTGTTATTTAG TTTTTAAATTTTTCT TERM 1016 637173 - 637218 + F 84 -11 -3.53717 | opp_overlap 637172 637177 637180, overlap 637172 AAAATAGTATGATAG TAAATAACAATTAATTAG TTAACATCGT CTAATTAATTGTTATTTA GTTTTTAAATTTTTC TERM 1017 637214 - 637177 - f 71 -7.4 -3.86916 | opp_overlap 637173 637172, overlap 637172 637180 TAGTATGATAGTAAA TAACAATTAATTAG TTAACATCGT CTAATTAATTGTTA TTTAGTTTTTAAATT TERM 1018 638044 - 638021 - g 79 -6.8 -4.74539 | AAGAAGTTAAGAAAA TTGATGCTTC TGTC GAAGAATCAA TCAAGATGCACAACG TERM 1019 638713 - 638697 - g 71 -9.5 -2.9581 | overlap 638692 AAATTATCAAGCAGA CTTTGAC CGC GTCAAAG ATGCTGATCCCGTTT asnB 637303 - 639207 + | asparagine synthetase, glutamine-hydrolysing TERM 1020 639249 - 639213 - f 100 -13.9 -3.18452 | opp_overlap 639215, overlap 639215 ATTAGGTTAATTCAA GAGAGGTTAGGGCAAAA ATA TTTTGCCTTAACCTCTT TTTTTGATAAAATAG TERM 1021 639247 - 639215 - f 100 -16.5 -3.15354 | opp_overlap 639215, overlap 639213 TAGGTTAATTCAAGA GAGGTTAGGGCAAAA ATA TTTTGCCTTAACCTC TTTTTTTGATAAAAT TERM 1022 639215 - 639247 + F 100 -18.7 -5.52986 | opp_overlap 639215 639213 TAGGTTAATTCAAGA GAGGTTAGGGCAAAA ATA TTTTGCCTTAACCTC TTTTTTTGATAAAAT murC 639369 - 640703 + | UDP-N-acetylmuramate--L-alanine ligase LSA0638 640800 - 641501 + | integral membrane protein TERM 1023 641653 - 641689 + F 100 -13.1 -5.76633 | opp_overlap 641653 TTCGGTTATCAAGAA GGGGTCTGAGACAAAAG TTA CTTTTGTCCCGGATTCC TTTTTTTATATGTGA TERM 1024 641689 - 641653 - f 78 -8.7 -3.71848 | opp_overlap 641653 TTCGGTTATCAAGAA GGGGTCTGAGACAAAAG TTA CTTTTGTCCCGGATTCC TTTTTTTATATGTGA LSA0639 641762 - 642070 + | PadR family transcriptional regulator LSA0640 642070 - 642669 + | hypothetical protein LSA0641 642670 - 642828 + | extracellular peptide precursor TERM 1025 642841 - 642872 + T 91 -9.4 -4.60255 | opp_overlap 642841 TAGGATAACAAAAAA GGCACGCACTACAG AATT TTGTAGGACGTGCC TTTTTAAACCCTTAT TERM 1026 642872 - 642841 - T 100 -10.9 -5.58179 | opp_overlap 642841 TAGGATAACAAAAAA GGCACGCACTACA GAATTT TGTAGGACGTGCC TTTTTAAACCCTTAT usp3 643321 - 642884 - | universal stress protein UspA family protein TERM 1027 643017 - 643029 + g 71 -3.3 -5.04249 | overlap 643018 CCAAATTCCTCAGGG ATGCG AAT CGCAA TTTCTTTTTTAGGAG TERM 1028 643500 - 643465 - H 100 -15.7 -5.626 | opp_overlap 643467 643469 TAGCGTATAAAAAAA TAGATGAGAACGTTG ATTTAA CAACGTTCCCATCTA TTAGAATTGTACCGA TERM 1029 643467 - 643498 + H 84 -11.7 -3.11291 | opp_overlap 643465, overlap 643469 GCGTATAAAAAAATA GATGAGAACGTTG ATTTAA CAACGTTCCCATC TATTAGAATTGTACC TERM 1030 645574 - 645556 - g 77 -4.5 -5.03314 | opp_overlap 645567 GCCATGTTTAAAAAA CAGCATC TCAGT GAGGCTG CTTGGCAGGATCAAT pepX 643705 - 646116 + | x-prolyl-dipeptidyl aminopeptidase LSA0644 646137 - 646646 + | putative acyl-CoA thioester hydrolase TERM 1031 646676 - 646655 - f 100 -10.9 -4.7629 | opp_overlap 646655 TTATTAACCGAAAAA GCTAGCCAC TTTA GTGACTAGC TTTTTTGATGTCTTC TERM 1032 646655 - 646676 + F 100 -8.7 -5.27399 | opp_overlap 646655 TTATTAACCGAAAAA GCTAGCCAC TTTA GTGACTAGC TTTTTTGATGTCTTC TERM 1033 647129 - 647151 + GF 72 -8.4 -3.5393 | opp_overlap 647129 ATGGCGACTATTATA CCGGCCAATT TAA AAATGGTCGG TTTGAAGGCGCTGGT LSA0645 646951 - 647307 + | hypothetical protein LSA0646 647279 - 649096 + | acyltransferase family 3 protein TERM 1034 649149 - 649106 - f 88 -8.3 -4.6902 | opp_overlap 649106 GCATAATTTCAAAAA GAGCACCAATTAGTTAG TTTTTAATCG CTAGCTGATTGGTGCTC TTTTTAGTATCAAAG TERM 1035 649106 - 649149 + F 100 -13.4 -4.8048 | opp_overlap 649106 GCATAATTTCAAAAA GAGCACCAATTAGTTAGT TTTTAATC GCTAGCTGATTGGTGCTC TTTTTAGTATCAAAG LSA0647 649359 - 650597 + | extracellular protein precursor TERM 1036 650633 - 650656 + F 91 -5.4 -5.7946 | gap 1, opp_overlap 650633 650635 AAGTTTAGTGAAAAA GGCTTATTCCT TCG AGGA-TAAGTC TTTTTTTGTTGCAAC TERM 1037 651777 - 651757 - g 78 -9.1 -3.82031 | opp_overlap 651753 TTAATCAGCAGCAAA CCGATTTAA TGT TTAAACCGG GTAGTGATTCTCATT LSA0648 650802 - 651983 + | putative penicillin-binding protein precursor (Beta-lactamase class C) TERM 1038 652018 - 651992 - f 78 -7.9 -4.2361 | opp_overlap 651992 AATATAAGTTTAAAA GACGGGGGAGC GAAGG GCTCAACCGTC TTTTTTTGTGACTTT TERM 1039 651992 - 652018 + F 100 -7.9 -5.68039 | opp_overlap 651992 AATATAAGTTTAAAA GACGGGGGAGC GAAGG GCTCAACCGTC TTTTTTTGTGACTTT TERM 1040 652129 - 652117 - f 78 -6.3 -4.84921 | opp_overlap 652125 TATAATAAAAAACAA GGAAA CGT TTTCC AAAGAAATTTTGTTA glpK 652158 - 653675 + | glycerol kinase TERM 1041 654860 - 654846 - g 73 -2.8 -5.14626 | ACTATGAAAATAAAA CAGC TGCTCGT GCTG ATGTTGAAAAAGCAA glpD 653687 - 655513 + | glycerol-3-phosphate dehydrogenase TERM 1042 655520 - 655493 - f 72 -9.4 -2.72379 | gap 1, opp_overlap 655496, overlap 655496 GCAATTGCTGAAGCA CAACTCGACTATT TAA AATAGT-GAGTTG AATAAGGAGGAAACC glpF 655538 - 656257 + | glycerol uptake facilitator protein TERM 1043 656301 - 656274 - f 100 -15.8 -4.58685 | opp_overlap 656274 AAACGCCTTTAAAAA GAGTGACTCATT CATT AATGAGTCACTC TTTTTTGTTCATCTT TERM 1044 656274 - 656301 + F 100 -15.8 -5.54885 | opp_overlap 656274 AAACGCCTTTAAAAA GAGTGACTCATT CATT AATGAGTCACTC TTTTTTGTTCATCTT purE 656478 - 656963 + | phospho ribosylaminoimidazole carboxylase (AIR carboxylase), catalytic subunit TERM 1045 657204 - 657192 - g 76 -7.7 -4.20696 | TTATGAATTTGAAAA CGTTG ATG CAACG ACGATTGAAAAAGCA purK1 656947 - 658098 + | phospho ribosylaminoimidazole carboxylase (AIR carboxylase), ATPase subunit TERM 1046 659346 - 659364 + G 71 -4.5 -4.62302 | opp_overlap 659347, overlap 659347 GACTATCATTATCAT ATTCGGC ATGTG GCCGAAA TTTTTGAGCGTGTTG purB1 658095 - 659390 + | adenylosuccinate lyase TERM 1047 659434 - 659394 - f 71 -5 -4.56597 | opp_overlap 659402, overlap 659402 GGTTTGGGTTAAAAA TAAACGAACTTTGAAATA GCGAT CATTTCAAAGTTTTTTTA TGGCAAAAATAAAAA TERM 1048 659402 - 659426 + F 91 -5.9 -5.60993 | opp_overlap 659402 659394 TTAAAAATAAACGAA CTTTGAAAT AGCGATC ATTTCAAAG TTTTTTTATGGCAAA TERM 1049 659645 - 659668 + G 74 -4 -4.93547 | overlap 659660 CTGGCAAAGGGGAAG TTAATTATGA AATT TCAAAATTAA TTTTTGCTTACTTAA purC 659503 - 660228 + | phospho ribosylaminoimidazole-succinocarboxamide synthase purS 660221 - 660481 + | phospho ribosylformylglycinamidine synthase purQ 660478 - 661164 + | phospho ribosylformylglycinamidine synthase glutamine amidotransferase subunit purL 661154 - 663379 + | phosphoribosylformylglycinamidine synthase II TERM 1050 664631 - 664649 + G 77 -8.2 -3.95852 | GTGCTGATTCGTTGG CCTTTTTG AGT CAAGAAGG TTTGATTGATGCGAT purF 663355 - 664788 + | amidophosphoribosyltransferase purM 664794 - 665822 + | phospho ribosylformylglycinamidine cyclo-ligase purN 665819 - 666388 + | phospho ribosylglycinamide formyltransferase purH 666405 - 667937 + | bifunctional phospho ribosylaminoimidazole carboxamide formyltransferase/IMP cyclohydrolase TERM 1051 668724 - 668738 + G 87 -8.5 -4.52857 | TGGCCGCTAATGGCA CGCCG TTTAC CGGCG TTTTATATGCGGGGT TERM 1052 669067 - 669086 + G 70 -7.1 -3.85698 | overlap 669068 CTTAATGAGTGCTGG TGGCCGT TTATAT ACGGCCG TTTATACGGCACCCA purD 667952 - 669202 + | phosphoribosylamine--glycine ligase (phosphoribosylglycinamide synthetase) loxL1N 669284 - 669523 + | L-lactate oxidase (N-terminal fragment), degenerate loxL1I 669505 - 670236 + | L-lactate oxidase (central fragment), degenerate loxL1C 670266 - 670361 + | L-lactate oxidase (C-terminal fragment), degenerate LSA0667 670508 - 670747 + | hypothetical protein TERM 1053 670801 - 670858 + T 100 -18.2 -3.67976 | opp_overlap 670807 670809, overlap 670809 GGGGCACAAACAGCA CAAAAAGAGGCGGAC-TTCAGGACAAAT GTAA ATTTG-CCTGAAAGTCCGCCTTTTGTTG TTTAAAATTAATGCC TERM 1054 670852 - 670807 - T 100 -13.6 -5.00846 | opp_overlap 670801 670809, overlap 670809 CAAACAGCACAAAAA GAGGCGGAC-TTCAGGACAAAT GTAA ATTTG-CCTGAAAGTCCGCCTT TTGTTGTTTAAAATT TERM 1055 670850 - 670809 - T 100 -16.2 -4.10552 | opp_overlap 670801 670809, overlap 670807 AACAGCACAAAAAGA GGCGGAC-TTCAGGACAAAT GTAA ATTTG-CCTGAAAGTCCGCC TTTTGTTGTTTAAAA TERM 1056 670809 - 670850 + T 100 -16.2 -5.00196 | opp_overlap 670809 670807, overlap 670801 AACAGCACAAAAAGA GGCGGAC-TTCAGGACAAAT GTAA ATTTG-CCTGAAAGTCCGCC TTTTGTTGTTTAAAA LSA0668 671108 - 670866 - | hypothetical protein TERM 1057 671890 - 671901 + G 70 -5.8 -4.3586 | TCAACTCGTTCAGAT GCCA AACA TGGC TTTTAATGTGGCTGG LSA0669 671315 - 671935 + | TetR family transcriptional regulator rplU 672083 - 672391 + | 50S ribosomal protein L21 LSA0671 672406 - 672747 + | putative ribosomal protein TERM 1058 672997 - 673011 + G 80 -10 -3.64703 | overlap 672988 TCTTGTCGAAGGTGT CGTTCG TTT CGAACG TTTCGGTAAAAACAA rpmA 672776 - 673063 + | 50S ribosomal protein L27 TERM 1059 673068 - 673100 + F 89 -10.8 -3.9444 | opp_overlap 673064 673075, overlap 673075 AAGCTAAATAATGCT TTAAAAACACTCAC ATTTC GTGAGTGTTTTTTA TTTGCTTAAGATTTG TERM 1060 673075 - 673093 + F 100 -8.9 -5.72053 | opp_overlap 673064 673075, overlap 673068 ATAATGCTTTAAAAA CACTCAC ATTTC GTGAGTG TTTTTTATTTGCTTA TERM 1061 673093 - 673075 - f 91 -9.6 -4.60255 | opp_overlap 673075 673068, overlap 673064 ATAATGCTTTAAAAA CACTCACA TTT CGTGAGTG TTTTTTATTTGCTTA TERM 1062 673233 - 673254 + F 100 -14.5 -5.09225 | opp_overlap 673233 TTTAGCATAACTAAA GGGATTGGC TTTG GCCAATCCC TTTTTTACATACAAT TERM 1063 673254 - 673233 - f 100 -14.5 -4.02108 | opp_overlap 673233 TTTAGCATAACTAAA GGGATTGGC TTTG GCCAATCCC TTTTTTACATACAAT efp2 673365 - 673922 + | elongation factor P LSA0674 673968 - 674411 + | putative general stress protein nusB 674411 - 674839 + | transcription antitermination protein NusB TERM 1064 674904 - 674929 + F 100 -7.7 -5.58209 | opp_overlap 674904 CGAAATTCCTTAAAA CACGTTAAAAG TATT TTTTTAGCGTG TTTTTTTAGGTTTAA folD 675034 - 675885 + | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase TERM 1065 675940 - 675969 + G 70 -7.9 -3.68529 | overlap 675944 TTTGAAAGCTAAATT TGAACGCGATCCG TATT TGGATCGGGTTTA TTTGACTGGTGAAAT TERM 1066 675944 - 675965 + G 74 -6.5 -4.47183 | overlap 675940 AAAGCTAAATTTGAA CGCGATCCG TATT TGGATCGGG TTTATTTGACTGGTG xseA 675878 - 677227 + | exodeoxyribonuclease VII large subunit xseB 677229 - 677459 + | exodeoxyribonuclease VII, small subunit ispA 677459 - 678331 + | farnesyl-diphosphate synthase LSA0680 678340 - 679170 + | putative rRNA methylase, hemolysin A-like protein LSA0681 679250 - 679702 + | ArgR family transcriptional regulator TERM 1067 679688 - 679713 + F 100 -13.5 -4.66833 | opp_overlap 679688 679690 679712 AGAGTATTTATCGAA GACTTGCTAAA GTAA TTTAGCAAGTC TTTTTAAGATTAGGA TERM 1068 679713 - 679688 - f 93 -13.5 -3.08642 | opp_overlap 679688, overlap 679690 679712 AGAGTATTTATCGAA GACTTGCTAAA GTAA TTTAGCAAGTC TTTTTAAGATTAGGA TERM 1069 679711 - 679690 - f 78 -10.3 -3.10056 | opp_overlap 679688, overlap 679688 AGTATTTATCGAAGA CTTGCTAAA GTAA TTTAGCAAG TCTTTTTAAGATTAG recN 679752 - 681455 + | DNA repair and genetic recombination protein N TERM 1070 681460 - 681492 + T 100 -20.8 -3.58522 | opp_overlap 681460 681463, overlap 681463 GACAAGCTTAATAAA GAAGGGGTTAGGAC TTGTT GTCCTAACCCCTTC TTTAACGGTCATCGT TERM 1071 681492 - 681460 - T 100 -20.8 -4.21989 | opp_overlap 681460 681463, overlap 681463 GACAAGCTTAATAAA GAAGGGGTTAGGAC TTGTT GTCCTAACCCCTTC TTTAACGGTCATCGT TERM 1072 681489 - 681463 - T 100 -16.7 -4.2204 | opp_overlap 681460 681463, overlap 681460 AAGCTTAATAAAGAA GGGGTTAGGAC TTGTT GTCCTAACCCC TTCTTTAACGGTCAT TERM 1073 681463 - 681489 + T 100 -16.7 -3.9281 | opp_overlap 681463 681460, overlap 681460 AAGCTTAATAAAGAA GGGGTTAGGAC TTGTT GTCCTAACCCC TTCTTTAACGGTCAT LSA0683 681837 - 681514 - | hypothetical protein LSA0684 681960 - 682184 + | hypothetical protein gmk2 682257 - 682868 + | guanylate kinase rpoZ 682873 - 683130 + | DNA-directed RNA polymerase, omega subunit TERM 1074 683145 - 683191 + F 90 -3.9 -5.95539 | gap 1, overlap 683139 AGAATAATTAGCGAA CCGCATTTTTAGTTTATTCATC GTGG GATGTCTAAATTAAGAG-GCGG TTTTTTTATTTAAAG TERM 1075 684387 - 684377 - g 71 -3.2 -5.00616 | TTGGCTTCCAAAAAA GTGA TTG CCAC ACAAATTTTAGAACG dfp 683219 - 684436 + | phosphopantothenoylcysteinesynthetase/decarboxyla se TERM 1076 685275 - 685261 - g 78 -7.1 -4.46854 | opp_overlap 685261, overlap 685263 CGAGCGAACAAGAAA CCGCA GTTGA TGCGG TCGTTCAATCCGCAT TERM 1077 686539 - 686527 - g 80 -9.1 -3.95022 | TTTATCAATATGAAA TGGCG GTG CGCCA CCGTGGCGGCTATCC TERM 1078 686544 - 686557 + G 81 -9.5 -3.89756 | GCGGTGCGCCACCGT GGCGG CTAT CCGCC TTATTACTTTACGGT priA 684438 - 686855 + | primosomal replication protein N (factor Y) TERM 1079 687087 - 687070 - g 70 -2.7 -4.98255 | gap 1, overlap 687071 TTCCAACCAGAAAAA CTCAGTGG TAG CC-CTGAA CTGGCTGACGTGATT fmt 686875 - 687831 + | methionyl-tRNA formyltransferase LSA0690 687821 - 689164 + | putative rRNA methytransferase (sun protein) TERM 1080 689302 - 689339 + G 78 -9.2 -3.63627 | TGCCGATGGAATGGG CGGTCATTTAGGAGGC GACGTG GCCTCTGAAATGGCTG TTTCCCATATCGGAC LSA0691 689186 - 689932 + | putative serine/threonine protein phosphatase LSA0692 689929 - 691812 + | putative serine/threonine protein kinase LSA0693 691912 - 692811 + | putative GTP-binding protein TERM 1081 692946 - 692968 + G 71 -7 -4.07687 | ATTGATATTATGGAT GGCATGTTTG TAC CTAACATGTC TTTTGGCGCCCAAGT rpe 692835 - 693497 + | ribulose-phosphate 3-epimerase LSA0695 693484 - 694134 + | putative thiamin pyrophosphokinase TERM 1082 694269 - 694295 + T 100 -19.6 -5.09762 | opp_overlap 694269 GTTTCCATCAAAAAA GGCCCGACAAAT TTA ATTTGTCGGGCC TTTTTATATTCGAAT TERM 1083 694295 - 694269 - T 100 -19.6 -5.14563 | opp_overlap 694269 GTTTCCATCAAAAAA GGCCCGACAAAT TTA ATTTGTCGGGCC TTTTTATATTCGAAT TERM 1084 694396 - 694360 - T 100 -21.9 -2.90075 | opp_overlap 694360 TTGTGCTTAACGATA TTTGACGCATCAGCGAT TGT ATCGCTAATGCGTCAAA TTTGGTTAATGATCA TERM 1085 694360 - 694396 + T 100 -19.7 -3.97042 | opp_overlap 694360 TTGTGCTTAACGATA TTTGACGCATCAGCGAT TGT ATCGCTAATGCGTCAAA TTTGGTTAATGATCA TERM 1086 694476 - 694455 - T 100 -10.3 -5.40072 | opp_overlap 694435, overlap 694434 TTTTGCGCAAAAAAA TAGATTGTC CGAA GACAATCTA AGAAACGAAATTAAA rpmB 694672 - 694487 - | 50S ribosomal protein L28 TERM 1087 694605 - 694625 + g 73 -8.3 -3.62775 | opp_overlap 694614 CAAGAACGACGAGAT GCGTTCAAA GCG TGTGAACGC TTGTTGCCAAATGAT LSA0697 694975 - 695337 + | putative general stress protein LSA0698 695401 - 697071 + | hypothetical protein TERM 1088 697086 - 697119 + F 90 -6.9 -5.14965 | gap 1, opp_overlap 697086 697081 ATTAATCAAATAAAA CAGGAATGGGGCTATT AAA AATA-CCTGATTCCTG TTTTTTAGTAGAAGT TERM 1089 697119 - 697086 - f 76 -4.7 -5.00851 | gap 1, opp_overlap 697086, overlap 697081 ATTAATCAAATAAAA CAGGAATGGGGCTATT AAA AATA-CCTGATTCCTG TTTTTTAGTAGAAGT TERM 1090 697187 - 697223 + F 80 -10.3 -3.38812 | opp_overlap 697187, overlap 697185 TGAGCATTAACTTAA TTTGGCGAATTGGCGAT GTA ATCGCTGATTTGACAAA TGTTGTTAAGCGCAA TERM 1091 697309 - 697345 + F 70 -8.1 -3.38812 | overlap 697307 697318 TGAGGATTAACTTAA TTTGGCGGATTGGCGAT GTA ATCGCTGATTTGACAAA TGTTGTTAAGCGCAA TERM 1092 697431 - 697467 + F 70 -8.1 -3.38812 | overlap 697429 697440 TGAGGATTAACTTAA TTTGGCGGATTGGCGAT GTA ATCGCTGATTTGACAAA TGTTGTTAAGCGCAA TERM 1093 697924 - 697937 + G 71 -3.1 -5.00616 | overlap 697917 TTGATTAATCATGAT GTCAT TATG GTGAC TTTTTTCAACCAACC TERM 1094 698118 - 698103 - g 87 -6.1 -5.1963 | TTCAACCAATAAAAA CGTGC GTCAAG GCACG CTCGTGAAATTGATT TERM 1095 698867 - 698857 - g 79 -6.8 -4.62069 | opp_overlap 698857 GTGCTACGTGAAAAA GGCT TGC AGCC TGATATGCTGGCAAT TERM 1096 699516 - 699563 + G 76 -7.8 -4.11484 | gap 1 TGAGGTCTTTGGCGA TCGGCAATCGGGATTACCAGTCT TCA AGGTTGGTGATCCAG-TCGCTGA TTTTGCCAGCTTACA recG 697657 - 699699 + | ATP-dependent DNA helicase, RecG plsX 699719 - 700732 + | Fatty acid/phospholipid synthesis protein, PlsX acp 700879 - 701121 + | Acyl carrier protein (ACP) TERM 1097 701132 - 701155 + F 100 -11.8 -5.76949 | opp_overlap 701131, overlap 701134 AATAAAGTAGTCAAT TGGACCGTGA TAAT TCACGGTCTA TTTTTTTTGAGAGTG TERM 1098 701134 - 701153 + F 100 -12.2 -4.52949 | opp_overlap 701131, overlap 701132 TAAAGTAGTCAATTG GACCGTGA TAAT TCACGGTC TATTTTTTTTGAGAG TERM 1099 701285 - 701325 + F 100 -25.1 -5.60993 | opp_overlap 701287 701291 AGCCCACGTTTAGTA TAGGAAGGGTAGCTAAAAG TCA CTTTTGGCTACCCTTCCTA TTTTTTTGTCCCCAA TERM 1100 701323 - 701287 - f 100 -21.1 -2.79183 | opp_overlap 701285, overlap 701291 CCCACGTTTAGTATA GGAAGGGTAGCTAAAAG TCA CTTTTGGCTACCCTTCC TATTTTTTTGTCCCC TERM 1101 701319 - 701291 - f 100 -14.7 -3.29471 | opp_overlap 701285, overlap 701287 CGTTTAGTATAGGAA GGGTAGCTAAAAG TCA CTTTTGGCTACCC TTCCTATTTTTTTGT TERM 1102 702445 - 702423 - g 74 -6.4 -4.43208 | ATACTGCTAAACAAA TGAAGAATGA TTC TCATTATTCA ACACAACAACAAGCT oppA 701594 - 703240 + | oligopeptide ABC transporter, substrate-binding lipoprotein precursor TERM 1103 703967 - 703952 - g 70 -7.6 -3.68265 | AAAGGGAACTCTAAA TGGCAA ACAG TTGCCA AACATGCGCTTCGTA oppB 703310 - 704245 + | oligopeptide ABC transporter, membrane-spanning subunit oppC 704246 - 705259 + | oligopeptide ABC transporter, membrane-spanning subunit TERM 1104 705302 - 705332 + F 80 -9.8 -3.51924 | opp_overlap 705302 705298 705311, overlap 705308 GGATTAGCATAGCAA GGCGAATGATTGCT GCA AGCAATCGTTTGAC TTGTGTCGCTAACCG TERM 1105 705308 - 705326 + F 77 -8.2 -3.83323 | opp_overlap 705302 705298 705311, overlap 705302 GCATAGCAAGGCGAA TGATTGCT GCA AGCAATCG TTTGACTTGTGTCGC TERM 1106 705525 - 705512 - f 100 -8.1 -5.243 | CAAATTACGAAAAAA GACCG TTCG CGGTC TCATAGTTGGAGGTC TERM 1107 706484 - 706474 - g 71 -6.8 -4.11484 | TTGAAGTTTCCAAAA CGCA TTT TGCG GCAACCTGGTTATTG oppD 705546 - 706571 + | oligopeptide ABC transporter, ATP-binding subunit TERM 1108 707060 - 707040 - g 80 -9.7 -3.67775 | opp_overlap 707037 707044, overlap 707051 AGTCGGACTCAATAA GGATCACGC AAC GCGTTATCC GCATGAATTCTCTGG oppF 706600 - 707562 + | oligopeptide ABC transporter, ATP-binding subunit TERM 1109 707624 - 707571 - f 85 -9.3 -4.17448 | opp_overlap 707571 TAATTAAATGAGAAA CGTCTATTTTGAAATATTTGTTT GCGTGTTA AAATAAATATTTCAGAACAGACG TTTTTTTTATGCGCC TERM 1110 707571 - 707624 + F 100 -11.5 -5.93809 | opp_overlap 707571 TAATTAAATGAGAAA CGTCTATTTTGAAATATTTGTTT GCGTGTTA AAATAAATATTTCAGAACAGACG TTTTTTTTATGCGCC TERM 1111 707655 - 707669 + F 88 -5.6 -5.42862 | TTTAATTCGGAATAC CGGCGT TCG GCGCTG TTTTTTTAGCCGTAT TERM 1112 708084 - 708063 - g 85 -5.7 -5.09762 | opp_overlap 708063 708062, overlap 708065 AGGTGAAGAGAAAAA TGGGGCCCG CGCC CGGGCGACA CTTTTGGAAGATTTA TERM 1113 708392 - 708376 - g 73 -5.8 -4.44667 | GGTCGCAATAAGAAA GCTGCC GAACA AGCAGC GGCTAAAAAAGCGTT rncS 707734 - 708426 + | ribonuclease (RNase III) TERM 1114 708839 - 708814 - g 79 -3.3 -5.38497 | opp_overlap 708814 ATTTAAATCAAAAAA GTTGTCGAT TAAAGGAT ATCGTCAAC TTATTTATGGATTCT TERM 1115 708849 - 708871 + G 82 -7 -4.8384 | GTCAACTTATTTATG GATTCTGGCT TAG GGCGAGAATC TTTTTCAATTATTTC TERM 1116 711264 - 711245 - g 73 -3.5 -4.92757 | opp_overlap 711247 711254, overlap 711247 TGAGCAAGAACAAAA CGCGGTT GCTCTA AACCGTG TTAAGATTAATATTG TERM 1117 711851 - 711865 + G 79 -7.8 -4.386 | overlap 711864 GGATGAAGCCAATGT CGATCG CTT CGGTCG TTTTATGAAGCGTTA smc 708462 - 712022 + | chromosome seggregation Smc protein TERM 1118 712928 - 712906 - g 77 -4.8 -4.99861 | CACCAACTAGAAAAA GCCGGTAAGA AGG TCTTACTTGC CGCTGGTGATACGTT TERM 1119 713165 - 713152 - g 72 -8.1 -3.76413 | CTTGAAAAGGTGAAA CGCGT GATT ACGCG TGAAATCTCAAGCGC ftsY 712033 - 713496 + | Signal recognition particle-docking protein FtsY TERM 1120 713509 - 713543 + F 100 -15.2 -5.15634 | opp_overlap 713509, overlap 713541 TAGAAAATTGAAAAA GTGTATTAAGTGGGCT ATA GGCCTACTTGATACAC TTTTTTAATAAGGTG TERM 1121 713543 - 713509 - f 100 -10.1 -4.89729 | opp_overlap 713509 713541 TAGAAAATTGAAAAA GTGTATTAAGTGGGC TATAG GCCTACTTGATACAC TTTTTTAATAAGGTG TERM 1122 713940 - 713952 + G 79 -3.3 -5.38326 | opp_overlap 713940, overlap 713941 ATCACGAGCAAAACG GCGCT TAG AGCGG TTTTTATTTGATTGG LSA0710 713569 - 714606 + | hypothetical protein TERM 1123 715034 - 715047 + G 70 -3.7 -4.8543 | opp_overlap 715024, overlap 715037 AGCAACAATGATTAT CACCG GTGT CGGGG TTTTTATCCCAGTTG LSA0711 714711 - 715994 + | putative gluconate permease TERM 1124 716749 - 716735 - g 78 -10 -3.53444 | opp_overlap 716737 TCAGTGTTGCGCAAA CACCAG GTG CTGGTG CGGCTGGTGGCTTGG TERM 1125 716857 - 716843 - g 70 -5.6 -4.30448 | AAACGCAACTCAAAA CGGCTG TTG CAGACG CCAATATCGTCGTCA LSA0712 716005 - 717150 + | glycerate kinase TERM 1126 717163 - 717182 + F 93 -7.9 -5.15634 | opp_overlap 717163 TAAATTAATTTAAAA CACACTC AATTTA GAGTGTG TTTTTTAGTGCGCTA TERM 1127 717182 - 717163 - f 78 -7.9 -4.33808 | opp_overlap 717163 TAAATTAATTTAAAA CACACTC AATTTA GAGTGTG TTTTTTAGTGCGCTA LSA0713 717276 - 717617 + | hypothetical protein TERM 1128 718630 - 718612 - g 71 -3.2 -5.02476 | opp_overlap 718604 718612 ATATGGCCGAAAAAA TCAAAG AAAATAG CTTTGA TTTTAACGATTTCCT ffh 717642 - 719078 + | Signal recognition particle protein Ffh rpsP 719171 - 719446 + | 30S ribosomal protein S16 LSA0716 719456 - 719698 + | hypothetical protein TERM 1129 719704 - 719737 + F 100 -6.9 -5.4833 | AGATGCCTAATCAAA CGTTTAAATGAAGCA GAGA TGTTTTGTTTAAGCG TTTTTTGTTGAATAA rimM 719764 - 720294 + | 16S rRNA processing protein, RimM trmD 720284 - 721024 + | tRNA (guanine-N1-)-methyltransferase rplS 721143 - 721490 + | 50S ribosomal protein L19 TERM 1130 721528 - 721506 - f 100 -11.2 -4.7173 | opp_overlap 721506 GATGACATTTAAAAA GGCCGACTCA TTG CGAGGCGGCC TTTCTTTATGTGGTT TERM 1131 721506 - 721528 + F 95 -10.5 -4.64952 | opp_overlap 721506 GATGACATTTAAAAA GGCCGACTC ATTGC GAGGCGGCC TTTCTTTATGTGGTT LSA0720 721568 - 721756 + | hypothetical protein TERM 1132 721780 - 721814 + T 100 -7.8 -5.86061 | ATGGCGCTTATAAGA CGCGATCTGTGGTTTC TTC GGAACTGCCGGTTGCG TTTTTTTTGATAGGG LSA0721 722158 - 721772 - | hypothetical protein TERM 1133 722296 - 722262 - R 100 -18 -5.39755 | opp_overlap 722262 TATAACGATAAAAAA GGGGTTGAGACAAAAG TAT CTTTTGCCTCGACCCC TTATTGGTTAATTAC TERM 1134 722262 - 722296 + r 100 -18 -3.86031 | opp_overlap 722262 TATAACGATAAAAAA GGGGTTGAGACAAAAG TAT CTTTTGCCTCGACCCC TTATTGGTTAATTAC LSA0722 722651 - 722304 - | integral membrane protein TERM 1135 722811 - 722797 - H 75 -8.6 -3.58037 | opp_overlap 722792 722806, overlap 722806 GATGAATTTGTCAAA GATGAG CAA CTCATC AATGAGTTTAAAAGT TERM 1136 722930 - 722903 - g 74 -5 -4.79667 | gap 1 AAAATTTATCAAAAA GCTGCTGAGTTTG TGG CAAA-TCAACAAC TAGAAGTGCCAGACT LSA0723 722846 - 722995 + | hypothetical protein TERM 1137 723259 - 723224 - T 100 -15.8 -3.29109 | gap 1, opp_overlap 723224 AAAATCTTACAGTAA GTCGGATAAACGTTGAT TTA AT-AACGTTTATCCGAC TTTTTTAATTTAATC TERM 1138 723224 - 723259 + T 100 -15.8 -5.40004 | gap 1, opp_overlap 723224 AAAATCTTACAGTAA GTCGGATAAACGTTGAT TTA AT-AACGTTTATCCGAC TTTTTTAATTTAATC TERM 1139 723616 - 723649 + T 100 -10.3 -5.23316 | GTTATTTCTGTCGAA GCACATCCATCTGTT TGGC GACGGGGGGATGTGC TTTTTTAGTGTCGTA LSA0724 725152 - 724352 - | hypothetical protein LSA0725 726038 - 725613 - | hypothetical protein TERM 1140 725893 - 725915 + g 86 -3.4 -5.61596 | ATGCCATCGGTATTT GAAGCTTC TTTAACT GGGGCTTC TTTTTTTGTAACGAT LSA0727 727265 - 726348 - | cell surface protein precursor TERM 1141 726375 - 726396 + g 70 -7.3 -3.83026 | TTGCCAATGATATCC TGCTGGTAA TTGC TCACCAGCA TTTAATATACGAGAG TERM 1142 727019 - 727048 + g 70 -7.9 -3.58343 | overlap 727021 727027 CGTCGTCTAACTTTT TGGCCGCATCTGA TTTT TCAGATTTGGCTA TTTCAGGATGGTGAC TERM 1143 727159 - 727175 + g 85 -7.3 -4.84182 | overlap 727162 ATCCTTTTTTTGATT CTTGAGT AAA ACTCAGG TTTATTCTTTTTTAA TERM 1144 727162 - 727182 + g 79 -3.3 -5.31545 | overlap 727159 CTTTTTTTGATTCTT GAGTAAAAC TCA GGTTTATTC TTTTTTAATATTGTT LSA0728 727741 - 727983 + | hypothetical protein LSA0729 728570 - 728064 - | hypothetical protein LSA0730 728693 - 728857 + | hypothetical protein LSA0731 728958 - 729404 + | hypothetical protein LSA0732 729437 - 729823 + | hypothetical protein TERM 1145 729854 - 729874 + F 88 -3.2 -5.88197 | gap 1, opp_overlap 729854 TCAGAAATCGATTAA GCCGGAGAC AATT GTCAC-GGC TTTTTTTGTGTTTCA LSA0733 729967 - 730491 + | hypothetical protein TERM 1146 730508 - 730529 + F 86 -9.5 -4.3534 | AATAGATTTCAGCGA CAGGTCAAA TTCT TTTGGCCTG TTTTAATCATTAAGG prmA 730555 - 731457 + | ribosomal protein L11 methyltransferase LSA0735 731469 - 732224 + | hypothetical protein TERM 1147 732417 - 732428 + G 75 -5.8 -4.74132 | opp_overlap 732416 732417 TTTATGGCAATTAAT GGCT GTGC AGCC TTTTTCATCGGCTAT LSA0736 732264 - 732608 + | integral membrane protein TERM 1148 732640 - 732606 - f 78 -9.4 -3.58037 | opp_overlap 732606 732611, overlap 732611 TACGAACGTCGCAAA TAAAACTGACTCGACA AAC TGTTGAGCCAGTTTTG TTGTTTAAAAAACAA TERM 1149 732606 - 732640 + F 91 -11.6 -3.90744 | opp_overlap 732606 732611, overlap 732611 TACGAACGTCGCAAA TAAAACTGACTCGACA AAC TGTTGAGCCAGTTTTG TTGTTTAAAAAACAA TERM 1150 732611 - 732635 + F 100 -9.3 -5.00196 | opp_overlap 732606 732611, overlap 732606 ACGTCGCAAATAAAA CTGACTCGACA AAC TGTTGAGCCAG TTTTGTTGTTTAAAA TERM 1151 732635 - 732611 - f 100 -9.3 -4.87133 | opp_overlap 732611 732606, overlap 732606 ACGTCGCAAATAAAA CTGACTCGACA AAC TGTTGAGCCAG TTTTGTTGTTTAAAA relA 732689 - 734920 + | GTP pyrophosphokinase TERM 1152 735330 - 735353 + G 79 -6.7 -4.67982 | ATATGCAAGTTGCTC TCGTCAACG ACGGAC CGGTGACGA TTTTATTCGATACGA dtd 734933 - 735379 + | D-tyrosyl-tRNA deacylase LSA0739 735379 - 736005 + | haloacid dehalogenase family hydrolase TERM 1153 736011 - 736045 + T 100 -16.6 -4.20696 | opp_overlap 736016, overlap 736016 TAATAAATGATATCA AAAAAGTCGCATGCCA ATT TGGCGTGCGACTTTTA TTTTACAATTAATGC TERM 1154 736040 - 736016 - T 100 -14.3 -5.2422 | opp_overlap 736016 736011 AATGATATCAAAAAA GTCGCATGCCA ATT TGGCGTGCGAC TTTTATTTTACAATT TERM 1155 736016 - 736040 + T 100 -16.5 -5.10163 | opp_overlap 736016, overlap 736011 AATGATATCAAAAAA GTCGCATGCCA ATT TGGCGTGCGAC TTTTATTTTACAATT LSA0740 736399 - 736043 - | integral membrane protein LSA0741 736527 - 736649 + | hypothetical protein TERM 1156 736666 - 736690 + F 100 -12.9 -5.59534 | ATTAATTAAATGGTT GGTCTAGGGTA TTT TGCCCTAGGCC TTTTTTGTTGTGGTT TERM 1157 737106 - 737119 + G 75 -2.3 -5.31275 | overlap 737103 GCTAAAAAAGATGCA CGTGC TTTT GTGCG TTTTTTCTACTCAGC LSA0742 736911 - 737342 + | cell division protein MraZ TERM 1158 737841 - 737817 - g 70 -5.9 -4.32651 | opp_overlap 737817 737816 AACAATTGATTAAAA TTTTCTTCA GATATGG TGAAGAAAA ATTCTCAAAACAAGT LSA0743 737357 - 738313 + | PutativeS-adenosylmethionine-dependent-methyltran sferase ftsL 738319 - 738699 + | putative cell division protein FtsL pbp2B1 738762 - 740834 + | bifunctional dimerisation/transpeptidase penicillin-binding 2B TERM 1159 741199 - 741185 - g 70 -2.8 -5.03747 | AAAGTCTTCAAAAAA CAAAAC CTT GGTTTG CGGGCTTGGCAAAAA mraY 740867 - 741829 + | phospho-N-acetylmuramoyl-pentapeptide- transferase murD 741845 - 743209 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase murG 743225 - 744325 + | N-acetylglucosaminyl transferase TERM 1160 744898 - 744888 - g 75 -5.4 -4.77757 | TTTTAAAAACGAAAA TGAC CCA GTCA TTAGGGAATAGTCCG TERM 1161 745041 - 745027 - g 73 -5.8 -4.42788 | TTTAACGGCACAAAA TGATAA TCC TTATCA AGTTCACTTATATAT ftsQ 744347 - 745207 + | cell division protein, FtsQ ftsA 745337 - 746647 + | cell division protein, FtsA ftsZ 746675 - 747913 + | cell division protein FtsZ LSA0752 747929 - 748363 + | hypothetical protein TERM 1162 748508 - 748520 + G 70 -5.5 -4.57569 | overlap 748508 GCGAGATTGGTTGAA CCCTT CTT AGGGG TTTTTGACCGGATCA TERM 1163 748565 - 748579 + G 70 -5.6 -4.36854 | GGTATTGGTTTTTCC GCCATC ATT GCTGGC TTTGTCTTGTATTTA LSA0753 748364 - 748648 + | integral membrane protein LSA0754 748650 - 749438 + | hypothetical protein divIVA 749472 - 750296 + | cell-division initiation protein (septum placement) TERM 1164 750469 - 750494 + F 100 -6.1 -6.09196 | overlap 750465 AGGTGGTACCACGAA GATTTCGTCCT ATAC AGGGCGGGGTC TTTTTTTGTTTTAAA TERM 1165 753102 - 753072 - g 70 -7.8 -3.60296 | opp_overlap 753075, overlap 753075 GATGCTGACGTTAAA CAATTATTGATTGT CTC ACAATTAACAATTG CTGACCAAGCTGTAG ileS 750528 - 753314 + | isoleucyl-tRNA synthetase TERM 1166 753366 - 753332 - f 100 -11.6 -5.03715 | gap 1, opp_overlap 753332, overlap 753318 ATGATGCTTAAAAAA GCTCAGATATACCGC GTTATT GCGGCA-ATCTGAGC TTTTTTTGTTCGAAA TERM 1167 753332 - 753366 + F 100 -10.1 -5.7946 | gap 1, opp_overlap 753318 753332 ATGATGCTTAAAAAA GCTCAGATATACCGCG TTAT TGCGGCA-ATCTGAGC TTTTTTTGTTCGAAA LSA0757 753486 - 754028 + | hypothetical protein TERM 1168 754193 - 754144 - f 89 -12.3 -3.31853 | opp_overlap 754147 754150 754159, overlap 754147 TAAAGGGAAACGCAA CAACCATCATGGAAAGCTCGACC AATT GGTCGGGCTTTTTATGATAGTTA CGTTGCAATATGATT TERM 1169 754190 - 754147 - f 91 -11.8 -3.78234 | opp_overlap 754147 754150 754159, overlap 754144 AGGGAAACGCAACAA CCATCATGGAAAGCTCGACC AATT GGTCGGGCTTTTTATGATAG TTACGTTGCAATATG TERM 1170 754147 - 754190 + F 100 -16.2 -3.1875 | opp_overlap 754144 754147, overlap 754150 754159 AGGGAAACGCAACAA CCATCATGGAAAGCTCGACC AATT GGTCGGGCTTTTTATGATAG TTACGTTGCAATATG TERM 1171 754150 - 754187 + F 100 -16.5 -2.78891 | opp_overlap 754147 754144, overlap 754147 754159 GAAACGCAACAACCA TCATGGAAAGCTCGACC AATT GGTCGGGCTTTTTATGA TAGTTACGTTGCAAT TERM 1172 754159 - 754178 + F 100 -11.4 -4.94902 | opp_overlap 754147 754144, overlap 754150 754147 CAACCATCATGGAAA GCTCGACC AATT GGTCGGGC TTTTTATGATAGTTA LSA0758 754349 - 754489 + | extracellular peptide precursor LSA0759 754505 - 754696 + | putative mannose-specific phosphotransferase system, enzyme IIA (N-terminal fragment), authentic frameshift LSA0760 754693 - 754926 + | putative mannose-specific phosphotransferase system, enzyme IIA (C-terminal fragment), authentic frameshift TERM 1173 754974 - 754936 - f 100 -10.3 -5.17786 | opp_overlap 754936 GAATAAAACTAAAAA GAGCAAGCCAAACATCT GGAAA AGATGAGGGGCTTGCTC TTTTTTGATATGTCA TERM 1174 754936 - 754974 + F 100 -10.3 -5.24989 | opp_overlap 754936 GAATAAAACTAAAAA GAGCAAGCCAAACATCT GGAAA AGATGAGGGGCTTGCTC TTTTTTGATATGTCA topB 755103 - 757175 + | DNA topoisomerase III TERM 1175 757296 - 757258 - T 100 -11 -4.91712 | opp_overlap 757258 TTCAATTTATAAAAA GAAGCAGTCCCCGTTAGA AAA CCTAACCGTGGCTGCTTC TTTTTTAGAATCGAT TERM 1176 757258 - 757296 + T 100 -12.5 -5.05782 | opp_overlap 757258 TTCAATTTATAAAAA GAAGCAGTCCCCGTTAG AAAAC CTAACCGTGGCTGCTTC TTTTTTAGAATCGAT LSA0762 758155 - 757301 - | extracellular/cell surface DNA-entry nuclease precursor TERM 1177 758114 - 758139 + g 95 -5.3 -5.79588 | opp_overlap 758097 758115, overlap 758115 ACCAATCGCAAGGAT AGCGACGGTTA GTAG TAGCCGACGCA TTTTTTTCGTTTTCA TERM 1178 758115 - 758138 + g 80 -8.8 -4.05313 | opp_overlap 758097 758115, overlap 758114 CCAATCGCAAGGATA GCGACGGTTA GTAG TAGCCGACGC ATTTTTTTCGTTTTC TERM 1179 758259 - 758227 - R 100 -11.4 -5.79526 | ATATGGTAAAAAAAA GGGCTGGAACAAAA TTTAC TTTTGTCCCAGTCC CATACTCATTATTTT galR 759260 - 758268 - | galactose operon transcriptional regulator TERM 1180 758470 - 758458 - G 72 -7.7 -3.7795 | opp_overlap 758457 TTAAAGCTGATCAAA CTGAG TTG CTCAG GTACTTTGATGGCCG TERM 1181 758934 - 758918 - G 73 -8.7 -3.42699 | ATTTACCGATGACAA TGACACC AGC GGCGTCA TAAAGAGTATCAAAA galK 759399 - 760565 + | galactokinase galE1 760591 - 761583 + | UDP-glucose 4-epimerase TERM 1182 761956 - 761923 - g 100 -11.9 -4.13304 | gap 1 AAAGGATCCCGAAAA GGCGTTGGCTTATTTC TAC GAATTAAGCCAA-GCC AACGATTATATCAAG galT 761594 - 763090 + | galactose-1-phosphate uridylyltransferase TERM 1183 763454 - 763441 - g 71 -6.7 -4.16921 | overlap 763433 763432 TAATAACGGCGAAAA CACCA ATCA TGGTG GTCCTAATAGCTTTG TERM 1184 763791 - 763805 + G 74 -4.3 -4.98531 | opp_overlap 763776 763787, overlap 763777 763798 CCGGGCAATTATTGC CAGTT GATCA AACTG TTTTTGATTTACGGC galM 763136 - 764176 + | aldose 1-epimerase csp1 764283 - 764483 + | cold shock protein CspA family protein TERM 1185 764512 - 764544 + F 88 -7.8 -4.77157 | gap 1 TAATGATACTTTGAA GAAGGTGC-CGGACT GATT AGTCTGTGGACCTTC TTTTTAATAGATTGA TERM 1186 764806 - 764839 + F 100 -17.7 -5.94214 | CTTAAACTTTAAGTC GTCCCTATAATCTTC TCAC GAGGATTATAGGGAC TTTTTTTATTATATT TERM 1187 765423 - 765411 - g 72 -7.7 -3.87994 | overlap 765416 ATGCACCTTTACAAA GCACA CGA TGTGC AACTACAAATCGGTG tyrS 764868 - 766127 + | tyrosyl-tRNA synthetase TERM 1188 766246 - 766281 + F 100 -6.9 -5.5762 | gap 1, opp_overlap 766246 AGAGCACGTTAAAAA TCACCCC-CAACCCTC TTTTC GAGCGTTCAGGGGTGA TTTTTTATATTTAAT TERM 1189 766281 - 766246 - f 90 -9.1 -4.63928 | gap 1, opp_overlap 766246 AGAGCACGTTAAAAA TCACCCCC-AACCCTC TTTTC GAGCGTTCAGGGGTGA TTTTTTATATTTAAT LSA0770 766358 - 767785 + | putative drug:H(+) antiporter TERM 1190 767825 - 767788 - T 95 -13 -4.26344 | opp_overlap 767793, overlap 767793 ACATCGTCATTAAAA TAAAAGCCATCAATTC TTTTAG GAATTGATGGCTTTTT CGTTAGCTGAAATTT TERM 1191 767793 - 767820 + T 100 -13.6 -4.88407 | opp_overlap 767788 767793 GTCATTAAAATAAAA GCCATCAATTCT TTTA GGAATTGATGGC TTTTTCGTTAGCTGA TERM 1192 767820 - 767793 - T 100 -12.9 -5.13722 | opp_overlap 767793, overlap 767788 GTCATTAAAATAAAA GCCATCAATTC TTTTAG GAATTGATGGC TTTTTCGTTAGCTGA LSA0771 768678 - 767806 - | integral membrane protein TERM 1193 768729 - 768744 + r 90 -9 -4.43309 | opp_overlap 768729 TATAACATAAAAAAA GCACTC AGTT GAGTGC TTTTAGTTGACATTC TERM 1194 768744 - 768729 - R 100 -9 -5.84432 | opp_overlap 768729 TATAACATAAAAAAA GCACTC AGTT GAGTGC TTTTAGTTGACATTC LSA0772 769943 - 768747 - | hypothetical protein TERM 1195 768908 - 768918 + g 74 -6.8 -4.35581 | TTTCTTGAAGGGTTT CGAC TAA GTCG TTTTGGGTCTTTTGA TERM 1196 769400 - 769413 + g 73 -5.3 -4.64766 | AGATATTCAGTGCAT CAAAG TAGG CTTTG TTTTTAGCGTATAGA TERM 1197 769804 - 769838 + g 95 -5.2 -5.75945 | gap 1 GCTTGTTGTTGTTGT TCAGGTG-AGAGTTG GTTTAG TAATTCTTCACCTGA TTTTTTTTCAACCGT LSA0773 770623 - 769943 - | hypothetical protein LSA0774 770814 - 771356 + | ADP-ribose phosphorylase TERM 1198 771464 - 771452 - g 70 -7.7 -3.73534 | CAACGCGATCAAGAA CGGTT AAG AACCG AACGGGAATATGCCC LSA0775 771368 - 771658 + | hypothetical protein pfs 771701 - 772393 + | methylthioadenosine nucleosidase (nucleoside phosphorylase) TERM 1199 772438 - 772474 + F 80 -10.3 -3.38812 | opp_overlap 772438, overlap 772436 772447 TGAGCATTAACTTAA TTTGGCGGATTAGCGAT GTA ATCGCTGATTTGACAAA TGTTGTTAAGCGCAA TERM 1200 772447 - 772465 + F 72 -8.2 -3.57883 | opp_overlap 772438, overlap 772438 772436 ACTTAATTTGGCGGA TTAGCGAT GTA ATCGCTGA TTTGACAAATGTTGT LSA0777 772649 - 772909 + | hypothetical protein TERM 1201 772919 - 772944 + F 100 -8.4 -5.75342 | opp_overlap 772919 772922 CAATAAGTGACCAAG TAAGTCTAGC TTTGAT GCTAGGCTTA TTTTTTTTGGACAAA TERM 1202 773369 - 773380 + G 85 -4.4 -5.42259 | TGATTATTGGCGAGC GGTT CATG AACC TTTTTTTACGGCTGA LSA0778 773016 - 773471 + | hypothetical protein LSA0779 773487 - 774461 + | hypothetical protein TERM 1203 774737 - 774766 + T 100 -10.8 -5.14563 | AATAATGACTTTTGA GGCTGACACAAA TTTATT TTTGTGCCAGCC TTTTTTAATAAAAAA TERM 1204 774804 - 774783 - T 100 -7.3 -5.7946 | opp_overlap 774783 TTTTTAATAAAAAAA CGCACCTTC ATCA GAAGATACG TTTTTAGATTTATAT LSA0780 775555 - 774830 - | cobalt ABC transporter ATP-binding protein TERM 1205 774946 - 774922 - G 73 -5.7 -4.56597 | opp_overlap 774929, overlap 774925 GGCCTTCGTTAAAAA TAACAATTCGC TTA GCGATTTGTTG CACCTGTTCGTAGTT TERM 1206 774943 - 774925 - G 75 -7.4 -4.40561 | opp_overlap 774929, overlap 774922 CTTCGTTAAAAATAA CAATTCGC TTA GCGATTTG TTGCACCTGTTCGTA TERM 1207 774929 - 774939 + g 71 -6.8 -4.17958 | opp_overlap 774925 774922 GTTAAAAATAACAAT TCGC TTA GCGA TTTGTTGCACCTGTT TERM 1208 775147 - 775159 + g 74 -4.8 -4.81249 | overlap 775156 ATAGTTGATAGGGGA CTCG ATCGG CGAG TTTTTCGATTTGAAG LSA0781 776370 - 775561 - | cobalt ABC transporter permease/transmembrane protein TERM 1209 776312 - 776294 - G 91 -7.4 -5.26875 | opp_overlap 776294 TTTTGAATTAAAAAA CGGTCG GGTTTAG CGACCG TTTGGGGAATTATTT LSA0782 777361 - 776354 - | cobalt transport protein CbiM LSA0783 778125 - 777460 - | putative transcriptional regulator, Fnr/Crp family LSA0784 778359 - 779633 + | hypothetical protein LSA0785 779645 - 780427 + | putative NCAIR mutase, PurE-related protein LSA0786 780424 - 781248 + | hypothetical protein LSA0787 781230 - 781700 + | hypothetical protein TERM 1210 782391 - 782376 - g 78 -5.4 -4.91852 | CCCATTAAAAATAAA GCCAAC TCAG ATTGGC AATATGGCATTATCG LSA0788 781764 - 782477 + | MIP family facilitator protein LSA0789 782498 - 782803 + | hypothetical protein LSA0790 782828 - 783664 + | hypothetical protein TERM 1211 783660 - 783644 - f 78 -3.6 -5.34365 | TCAGAACAACAAAAA GCAGCC TTGAT GACCGC ATAATTGAAGCAATA TERM 1212 783702 - 783682 - f 70 -5.4 -4.46404 | opp_overlap 783682, overlap 783685 GAAGCAATATTAAAA GATTAGGG GCTAA CCCTAGTC TTTTTTTAGTTTTGA TERM 1213 783682 - 783702 + F 100 -7.6 -5.79588 | opp_overlap 783682 783685 GAAGCAATATTAAAA GATTAGGG GCTAA CCCTAGTC TTTTTTTAGTTTTGA TERM 1214 783742 - 783768 + F 71 -5.2 -4.56597 | overlap 783745 ACCGCTAATAAAGTG GCTTCTATGTTA AAC TAACATAGATAC TTTTTAAAACGAGGC TERM 1215 783745 - 783765 + F 77 -9.9 -3.23708 | overlap 783742 GCTAATAAAGTGGCT TCTATGTTA AAC TAACATAGA TACTTTTTAAAACGA TERM 1216 784653 - 784628 - g 89 -10.5 -3.90856 | AATCCTTCAAGCAAA CGGCATTGACT TTGA AGTCAATGGCG CAGGTAGTGACGATA TERM 1217 784944 - 784931 - g 78 -2.4 -5.41746 | AATTGTGCAAAAAAA CTTG GCTAAG CAAG CCGGTAAAGCCTAGG LSA0791 783792 - 784958 + | putative cysteine desulfurase LSA0792 785018 - 785365 + | hypothetical protein TERM 1218 786553 - 786521 - g 71 -9.9 -2.6472 | opp_overlap 786528 786530, overlap 786530 TAACAGTTCACATGA CTTCAGAGACAACTG CTA CAGTTGTCTTCGATG CGCCAGTGCGCGCTA TERM 1219 786528 - 786546 + G 86 -11.8 -3.05596 | opp_overlap 786521 786530, overlap 786530 TCACATGACTTCAGA GACAACTG CTA CAGTTGTC TTCGATGCGCCAGTG trmU 785551 - 786690 + | tRNA(5-methylaminomethyl-2-thiouridylate)-methylt ransferase TERM 1220 786750 - 786717 - f 71 -4.6 -4.85129 | opp_overlap 786720, overlap 786720 ATGACACATTAAAAA GAAGCGATGCCAAA GATAAT TCTGGTATCGCTTT TTTTTATTGCGAATT TERM 1221 786720 - 786747 + F 100 -7 -6.09888 | opp_overlap 786720 786717 ACACATTAAAAAGAA GCGATGCCAAAG ATAA TTCTGGTATCGC TTTTTTTTATTGCGA TERM 1222 786747 - 786720 - f 73 -6.3 -4.51891 | opp_overlap 786720, overlap 786717 ACACATTAAAAAGAA GCGATGCCAAA GATAAT TCTGGTATCGC TTTTTTTTATTGCGA deoC 786849 - 787499 + | 2 deoxyribose-5 phosphate aldolase deoB 787515 - 788705 + | phosphopentomutase TERM 1223 789389 - 789379 - g 73 -5.4 -4.70626 | GAAGAACGCGAAAAA TCGT TCA ACGA AATGATAACGGTTGC deoD 788722 - 789426 + | purine-nucleoside phosphorylase LSA0798 789448 - 790677 + | pyrimidine-specific nucleoside symporter LSA0799 790701 - 791975 + | putative purine transport protein TERM 1224 792112 - 792087 - g 84 -11.3 -3.20207 | opp_overlap 792091, overlap 792091 792102 AATATGAGCCAGGAA GAAATCGCTAA AAAA CTAGCGATTTC TAGACCAACCGTCTC TERM 1225 792108 - 792091 - g 72 -6.3 -4.258 | opp_overlap 792091, overlap 792087 792102 TGAGCCAGGAAGAAA TCGCTAA AAAA CTAGCGA TTTCTAGACCAACCG deoR 792003 - 792956 + | deoxyribonucleoside synthesis operon transcriptional regulator pdp 792975 - 794273 + | pyrimidine-nucleoside phosphorylase TERM 1226 794313 - 794280 - f 79 -8.2 -4.06786 | opp_overlap 794280 ATTCAATAGTAGAAA GGGCGTTAATGGGT GAGTTT AACCATTAACGTCC TTTTTTATAATAAAA TERM 1227 794280 - 794313 + F 100 -11.1 -5.31275 | opp_overlap 794280 ATTCAATAGTAGAAA GGGCGTTAATGGGTG AGTT TAACCATTAACGTCC TTTTTTATAATAAAA TERM 1228 794472 - 794482 + F 81 -5.4 -5.23765 | opp_overlap 794472 TTTCACAAAAACTGA CGAT GAA ATCG TTTTTATATTATTTA nox 794510 - 795844 + | NADH oxidase TERM 1229 795872 - 795899 + F 100 -8.4 -5.55769 | TGAGACGCTTTTAAA GGTGCTGGGGAA AATT TTTCCCGGTGCC TTTTTTGTTATAAAA TERM 1230 796534 - 796505 - g 75 -5.7 -4.7254 | gap 1, opp_overlap 796505 796504 796507 AGGCGTTATTAAAAA CACCCTTGGCA-GA TAT TCGTGCCCACGGTG GTTTAACGAATTCAT gpm4 795997 - 796656 + | phosphoglycerate mutase TERM 1231 796705 - 796692 - g 78 -2.3 -5.49809 | GAAATTTTAAAAAAA TGGGC AGCT GGCCA ACACGAAGAAGCCGT LSA0804 796668 - 797327 + | hypothetical protein TERM 1232 797608 - 797632 + G 73 -8.6 -3.61232 | opp_overlap 797606 797610 797617 TCAGGTTGACCAACC GACGACTAAG ACTGG CTTAGTCGCC TATTTATCTGGCGAA TERM 1233 797630 - 797610 - g 70 -9.8 -2.56715 | opp_overlap 797608, overlap 797606 797617 AGGTTGACCAACCGA CGACTAAG ACTGG CTTAGTCG CCTATTTATCTGGCG TERM 1234 798221 - 798208 - g 74 -6.7 -4.25104 | opp_overlap 798207 CGTTGGTGATGAAAA TCGGA TTTA TCCGA ATGGTTTGTACAACG recD 797333 - 799861 + | exodeoxyribonuclease V, alpha subunit TERM 1235 800395 - 800384 - g 72 -7.2 -3.91541 | overlap 800378 TTACCAAAGCAACAA CCCG TTAA CGGG CATGTTGAACGTTTG LSA0806 799904 - 801115 + | GNAT family acetyltransferase TERM 1236 801121 - 801159 + T 88 -8.1 -4.7078 | opp_overlap 801121 801124 TTATTTCTAAAAAAA GAGCCCTCAATATTGGC AGTTA GCCATAACTGAGGGTTC TTTTTGAATAATTGG TERM 1237 801159 - 801121 - T 100 -8.1 -5.42259 | opp_overlap 801121, overlap 801124 TTATTTCTAAAAAAA GAGCCCTCAATATTGGC AGTTA GCCATAACTGAGGGTTC TTTTTGAATAATTGG LSA0807 801415 - 801176 - | hypothetical protein LSA0808 801681 - 802292 + | putative amino acid export protein TERM 1238 802304 - 802322 + F 100 -8.8 -5.77853 | opp_overlap 802304 TTAGATCGCAAAAAA CGCACATC ATT GATGGGCG TTTTTTTTAGCCGTT TERM 1239 802322 - 802304 - f 100 -8.8 -5.07567 | opp_overlap 802304 TTAGATCGCAAAAAA CGCACATC ATT GATGGGCG TTTTTTTTAGCCGTT TERM 1240 802739 - 802753 + G 73 -3.5 -5.07652 | ACAATCTTCAGCGGA GTTCG CCATT CGGAC TTTTATTTTAACGGA LSA0809 802383 - 803483 + | putative DNA alkylation repair protein TERM 1241 803539 - 803593 + F 76 -10 -3.03124 | opp_overlap 803548 803557 ACCAACTTTCTGCGC TTTACGAGACTTGTCAAACCGGCGTC TTT GACGCCAATTCGCCAAGTAGCGTAAA TGTTCAAAAGTAAAC TERM 1242 803584 - 803548 - f 100 -14.5 -2.78384 | opp_overlap 803539, overlap 803557 CTGCGCTTTACGAGA CTTGTCAAACCGGCGTC TTT GACGCCAATTCGCCAAG TAGCGTAAATGTTCA TERM 1243 803575 - 803557 - f 75 -8.8 -3.56821 | opp_overlap 803539, overlap 803548 ACGAGACTTGTCAAA CCGGCGTC TTT GACGCCAA TTCGCCAAGTAGCGT TERM 1244 803632 - 803650 + F 73 -6.6 -4.33146 | ATAACACTCTCTTGA CCTTTGGG TTA CCCTAGGG TTTATACTTTTTTGT LSA0810 803677 - 804393 + | MerR family transcriptional regulator LSA0811 804395 - 804949 + | putative acetyltransferase TERM 1245 804971 - 805009 + F 93 -6.8 -5.9362 | gap 1, opp_overlap 804968 804971, overlap 804973 AAACATAAAAGACGA TTCCCCAACCATTTCGG TTTCTC CCGA-ATGATTGGGGTA TTTTTTTGTATTTTA TERM 1246 805009 - 804971 - f 70 -9 -3.03085 | gap 1, opp_overlap 804971 804973, overlap 804968 AAACATAAAAGACGA TTCCCCAACCATTTCGG TTTCTC CCGA-ATGATTGGGGTA TTTTTTTGTATTTTA TERM 1247 804973 - 805007 + F 91 -9.4 -4.5577 | gap 1, opp_overlap 804971 804968, overlap 804971 ACATAAAAGACGATT CCCCAACCATTTCGG TTTCTC CCGA-ATGATTGGGG TATTTTTTTGTATTT TERM 1248 805261 - 805271 + G 71 -6.8 -4.15698 | opp_overlap 805261 GGCGCTAATTCCAAA TCGG TAC CCGA TTATTTATATCGATA TERM 1249 805510 - 805492 - g 73 -6 -4.56775 | AGGCGCTGCTAAAAA CGTTTTGT TCC ACCAAACG GTTCGGCCCGGTGAT fabZ1 805217 - 805672 + | (3R)-hydroxymyristoyl-[acyl-carrier protein] dehydratase TERM 1250 806499 - 806470 - g 100 -8.7 -4.91109 | gap 1 GCTTGATTACAAAAA TGGCTAGCATGTTG GAT CAAC-CGCTAACCA AGTTTCCAATGAATT fabH 805683 - 806663 + | 3-oxoacyl-[acyl carrier protein] synthetase III acpP 806706 - 806945 + | Acyl carrier protein TERM 1251 806987 - 807023 + F 77 -10.3 -2.90075 | opp_overlap 806982, overlap 806996 806999 TGAGCATTAACCGCA TTTGGCGAATTGGCGAT GGA ATCGCTGATTTGACAAA TATCGTTAAGCGCAA fabD 807086 - 808027 + | malonyl-CoA:ACP transacylase TERM 1252 808520 - 808469 - g 84 -11.7 -3.0976 | gap 1, opp_overlap 808482 808488, overlap 808482 808498 GCCAACACGGTAATA TGGGCCAAGCCAATTACGCC-GCT AGTAA AGCTGGCGTGATTGGATTCACCCA ATCCGTCGCCAAAGA TERM 1253 808675 - 808688 + G 78 -5.9 -4.85782 | opp_overlap 808675 GGTCAACCAGAAGAA GTGGC ATCG GCCGC TTTATTTTTAGCAGA fabG 808027 - 808758 + | 3-ketoacyl-(acyl-carrier-protein) reductase fabF 808796 - 810004 + | 3-oxoacyl-[acyl carrier protein] synthetase II TERM 1254 810418 - 810400 - g 73 -8.2 -3.72984 | opp_overlap 810399 810400 GGACAATTACTGAAA TCCTCGTT CAA AACGAAGA ATTAGTTGAATACCA accB 810009 - 810464 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit fabZ2 810468 - 810890 + | (3R)-hydroxymyristoyl-[acyl carrier proetin] dehydratase TERM 1255 811332 - 811322 - g 73 -5.4 -4.7254 | ATGGCCCATTAAAAA GTCT TGC AGAC GCTAAAATCGTCGCC TERM 1256 811844 - 811863 + G 70 -7.8 -3.62849 | TCCGGGAACAAATTT TGGTGGCC GCGG GGGCACCA TTATCATTTGATCAA accC 810904 - 812250 + | Acetyl-CoA carboxylase (biotin carbooxylase subunit) accD 812264 - 813115 + | Acetyl-CoA carboxylase (carboxyl transferase beta subunit) TERM 1257 813558 - 813532 - g 100 -12.4 -4.12188 | opp_overlap 813539 TCAGTACTCTGAAAA CACCGATGATTA GCG TAATCTTCGGTG AAGGGGGCTCAGGTG accA 813093 - 813890 + | Acetyl-CoA carboxylase (carboxyl transferase alpha subunit) fabI 813914 - 814663 + | enoyl-(acyl carrier protein) reductase TERM 1258 814849 - 814879 + G 100 -10.5 -4.5081 | opp_overlap 814847 814849 GGCCGCGGGCAAAGA GACCACCAATTTG CATCA CCGATTGGTGGTC TTTATTTAAGTCTTT TERM 1259 814879 - 814849 - g 71 -9 -3.34398 | opp_overlap 814849, overlap 814847 GGCCGCGGGCAAAGA GACCACCAATTTGC ATC ACCGATTGGTGGTC TTTATTTAAGTCTTT birA1 814669 - 815424 + | biotin-[acetyl-CoA carboxylase] ligase LSA0825 815443 - 815976 + | putative biotin synthesis protein TERM 1260 815988 - 816005 + G 100 -6.2 -5.67063 | opp_overlap 815988 816001, overlap 816002 TTAATCATGAAGAAA GTCGCC GAAGAA GGCGGC TTTTTTTGTGGTCAA TERM 1261 816036 - 816026 - g 84 -5.4 -5.40072 | opp_overlap 816002 816035, overlap 816001 816033 TTGTGGTCAAAAAAA GCAA GAT TTGC ATAATATGCTATAAT LSA0826 815979 - 816050 + | hypothetical protein LSA0827 816091 - 817233 + | lipoprotein precursor TERM 1262 817261 - 817246 - f 81 -5.4 -5.15117 | opp_overlap 817241 817246 TAAAATGTTAAAAAA TTGCGC TTAT ACGCAA TTTTGATTATAATAG LSA0828 817297 - 817767 + | hypothetical protein TERM 1263 817773 - 817795 + T 100 -14.2 -5.04601 | opp_overlap 817773 GCAAGCATAAAAAAA CAAGGTCCCT TTT AGGGGCCTTG TTTTTAGTTTCTAGA TERM 1264 817795 - 817773 - T 100 -12 -5.71983 | opp_overlap 817773 GCAAGCATAAAAAAA CAAGGTCCCT TTT AGGGGCCTTG TTTTTAGTTTCTAGA LSA0829 818351 - 817806 - | integral membrane protein TERM 1265 818114 - 818091 - G 70 -3.8 -4.83169 | overlap 818092 818095 ATGTTGGTATAAAAA CCAACCTGCT AGTA AGCCGGTTAA AAGGCCATCTGGTAA iunH3 819338 - 818364 - | inosine-uridine preferring nucleoside hydrolase TERM 1266 819026 - 819016 - G 86 -6.8 -5.00616 | opp_overlap 819016 819004 819018 819024, overlap 819017 819018 GTCGTCGCTAAAAAA TCGG CTG CCGA TTGCTCAGCGGCCTT TERM 1267 819682 - 819707 + r 100 -14.1 -5.85244 | opp_overlap 819682 TAAATAACAGATAAA CACCTCATCGG ATAA TCGATGAGGTG TTTTTTGTTTTGATT TERM 1268 819707 - 819682 - R 100 -13.4 -4.30477 | opp_overlap 819682 TAAATAACAGATAAA CACCTCATCG GATAAT CGATGAGGTG TTTTTTGTTTTGATT TERM 1269 819766 - 819734 - R 95 -7.2 -5.41143 | gap 1, opp_overlap 819734 GATTGCGCAAAAAAA TAACCAGACGATTGA AAAA TCAAT-GACTGGTTA TTTTTTGAAATGCCT TERM 1270 819734 - 819766 + r 85 -7.2 -5.05782 | gap 1, opp_overlap 819734 GATTGCGCAAAAAAA TAACCAGACGATTGA AAAA TCAAT-GACTGGTTA TTTTTTGAAATGCCT LSA0831 820397 - 819795 - | putative nitroreductase (oxidoreductase) TERM 1271 820881 - 820891 + G 71 -8.2 -3.54459 | GCAATTCCGGATGAT GCGG ATG CCGC TTTGGCACGAATTGC TERM 1272 821011 - 821033 + G 72 -7.8 -3.81929 | CAGATGCACGTGTGA GAGATAAGGG TGT CTTTTATCTC TTTAATCGGTTATTA LSA0832 820725 - 821699 + | hypothetical protein LSA0833 821726 - 822376 + | haloacid dehalogenase family hydrolase TERM 1273 822382 - 822401 + F 89 -5.8 -5.26875 | opp_overlap 822382 ATTATCATAAAAGTA TAATCTTG AACC CGAGATTA TTTTTTAGTTAACCG LSA0835 822516 - 823370 + | XRE family DNA-binding protein TERM 1274 823363 - 823410 + T 100 -16.6 -3.19175 | opp_overlap 823363 823365 823376, overlap 823376 CACAAATTCAAAAAT TAGCATAAAAAAAGCTGAGGAT TTAA ATCCTCAGCTTTTTTAGTGCCA TTAAATATCTTGGCC TERM 1275 823410 - 823363 - T 100 -16.6 -3.49633 | opp_overlap 823363 823376, overlap 823365 823376 CACAAATTCAAAAAT TAGCATAAAAAAAGCTGAGGAT TTAA ATCCTCAGCTTTTTTAGTGCCA TTAAATATCTTGGCC TERM 1276 823408 - 823365 - T 100 -17 -3.30199 | opp_overlap 823363 823376, overlap 823363 823376 CAAATTCAAAAATTA GCATAAAAAAAGCTGAGGAT TTAA ATCCTCAGCTTTTTTAGTGC CATTAAATATCTTGG TERM 1277 823397 - 823376 - T 100 -13.1 -5.67967 | opp_overlap 823363 823376, overlap 823365 823363 ATTAGCATAAAAAAA GCTGAGGAT TTAA ATCCTCAGC TTTTTTAGTGCCATT TERM 1278 823376 - 823397 + T 100 -13.1 -5.16237 | opp_overlap 823376 823365 823363, overlap 823363 ATTAGCATAAAAAAA GCTGAGGAT TTAA ATCCTCAGC TTTTTTAGTGCCATT usp6 823905 - 823411 - | universal stress protein UspA family protein LSA0837 824243 - 823968 - | hypothetical protein TERM 1279 824297 - 824276 - R 100 -12.3 -5.45652 | ATTGTCAACAAAAAA GGGCCAACG CAAA CGTTAGCCC TGTCAAAGTCATTGG LSA0839 825838 - 824558 - | recombination factor protein RarA TERM 1280 825739 - 825753 + g 70 -2.8 -5.00616 | opp_overlap 825739, overlap 825740 GTAATTTGGCATCAA CCATTC GTC GAATGA TTTTTTGCGGACCCA TERM 1281 827621 - 827631 + G 73 -5.4 -4.64334 | TTTTTAACGCGACCA TCAG AAA CTGA TTTTGTTACAGCCTT LSA0840 825971 - 828250 + | bifunctional glutamate--cysteine ligase/glutathione synthetase TERM 1282 828261 - 828304 + T 90 -12.6 -3.16564 | gap 1, opp_overlap 828262 828272, overlap 828272 ATTAATTTAAAAAGA ATAC-CAAAAAAGCCGTTGGC ATT GCCCACGGCTTTTTTGTGTGG TTAATCGAATAGACG TERM 1283 828303 - 828262 - T 100 -13.9 -4.47888 | gap 1, opp_overlap 828261 828272, overlap 828272 TTAATTTAAAAAGAA TAC-CAAAAAAGCCGTTGGC ATT GCCCACGGCTTTTTTGTGTG GTTAATCGAATAGAC TERM 1284 828292 - 828272 - T 100 -12.5 -5.31545 | opp_overlap 828272 828261, overlap 828262 AAGAATACCAAAAAA GCCGTTGGC ATT GCCCACGGC TTTTTTGTGTGGTTA TERM 1285 828272 - 828292 + T 100 -12.5 -5.42131 | opp_overlap 828262 828272, overlap 828261 AAGAATACCAAAAAA GCCGTTGGC ATT GCCCACGGC TTTTTTGTGTGGTTA LSA0841 828748 - 828305 - | hypothetical protein LSA0842 828819 - 829424 + | hypothetical protein TERM 1286 829461 - 829427 - T 75 -9.4 -3.27619 | opp_overlap 829432, overlap 829432 829453 AAATGCTAAATAAAC CAAAAGGTGCTGCTAA ATT TTAGCAACGCCTTTTT TGATGACAAAAAAAG TERM 1287 829432 - 829456 + T 100 -9.3 -5.14563 | opp_overlap 829427 829432 829453 CTAAATAAACCAAAA GGTGCTGCTAA ATT TTAGCAACGCC TTTTTTGATGACAAA TERM 1288 829456 - 829432 - T 100 -9.3 -4.72863 | opp_overlap 829432, overlap 829427 829453 CTAAATAAACCAAAA GGTGCTGCTAA ATT TTAGCAACGCC TTTTTTGATGACAAA TERM 1289 829476 - 829497 + T 100 -8.7 -5.27335 | opp_overlap 829453 829476 TTGATGACAAAAAAA GAGCCAGAC CGAA GTCTGACTC TTTTTGTTTAACAGA TERM 1290 829497 - 829476 - T 100 -10.9 -5.67063 | opp_overlap 829476, overlap 829453 TTGATGACAAAAAAA GAGCCAGAC CGAA GTCTGACTC TTTTTGTTTAACAGA rpsD 830125 - 829520 - | 30S ribosomal protein S4 TERM 1291 830156 - 830133 - H 80 -2.4 -5.71712 | overlap 830135 CGTGACATAAAAAAA TCCTCCAATA ATTG TTTTGGAGTA AAATAATCCGATGTA LSA0845 830498 - 832210 + | septation ring formation regulator EzrA TERM 1292 832220 - 832274 + F 100 -13.9 -3.88438 | gap 1, opp_overlap 832212 832222, overlap 832222 TTATAATCTTTAAAA AAGTGGGCTAAAAGATAGCG-CTGAT ATTA ATCAGGTGTTGTCTTTTGGCCCACTC TTGTGTTTAATGTAA TERM 1293 832222 - 832272 + F 100 -16.5 -3.52021 | gap 1, opp_overlap 832222, overlap 832220 ATAATCTTTAAAAAA GTGGGCTAAAAGATAGCG-CTGAT ATTA ATCAGGTGTTGTCTTTTGGCCCAC TCTTGTGTTTAATGT TERM 1294 832272 - 832222 - f 89 -7.7 -5.06103 | gap 1, opp_overlap 832222 832220 ATAATCTTTAAAAAA GTGGGCTAAAAGATAGC-GCTGAT ATTA ATCAGGTGTTGTCTTTTGGCCCAC TCTTGTGTTTAATGT TERM 1295 832737 - 832758 + G 73 -8.7 -3.53091 | overlap 832740 TACCAGTTGATAAGT TTGGCCGGA TTAA TCCGGCTGA TTTAAAAGCGGCGAT TERM 1296 832740 - 832755 + G 76 -10.4 -2.90496 | overlap 832737 CAGTTGATAAGTTTG GCCGGA TTAA TCCGGC TGATTTAAAAGCGGC LSA0846 832370 - 833518 + | putative cysteine desulfurase thiI 833543 - 834760 + | thiamine biosynthesis ATP pyrophosphorylase TERM 1297 834770 - 834791 + F 100 -10.9 -6.20267 | opp_overlap 834768 834769 TTATAGCATCAAACG GTCCAACCA GAAA TGGTTGGGC TTTTTTTGTTTTTAA TERM 1298 835293 - 835274 - g 70 -7.9 -3.63627 | opp_overlap 835274, overlap 835289 CGGTCAGACTTTAAA TGGCGTA CCAATC TACGCCA TTGATCAACTGGCGA LSA0848 834888 - 835514 + | redox-sensing transcriptional repressor Rex TERM 1299 835724 - 835738 + F 70 -8.6 -2.95116 | overlap 835721 CAAATCATGAGTTGG GGACTA GTC TAGTCC TAATTTAGGTGGTAC TERM 1300 835763 - 835787 + F 86 -4.3 -5.64421 | opp_overlap 835763, overlap 835756 TGGTACCGCGAAAAA GCATTCGTC CTATTGT GAGGAATGC TTTTTTGTTTGCCAT valS 835833 - 838481 + | valyl-tRNA synthetase TERM 1301 838496 - 838518 + F 100 -16.4 -4.9792 | opp_overlap 838496, overlap 838512 AAGCACATCTCAAAA CGCCACCTTA TTT TAAGGTGGCG TTTTTGTATGCCATC TERM 1302 838518 - 838496 - f 100 -16.4 -4.18058 | opp_overlap 838496 838512 AAGCACATCTCAAAA CGCCACCTTA TTT TAAGGTGGCG TTTTTGTATGCCATC folC1 838603 - 839907 + | putative polylpolyglutamate synthase LSA0851 839935 - 840558 + | haloacid dehalogenase family hydrolase radC 840632 - 841306 + | DNA repair protein (RadC) mreB 841470 - 842474 + | cell shape determining protein MreB, actin-like mreC 842632 - 843492 + | cell shape determining lipoprotein precursor mreD 843479 - 844024 + | cell shape determining protein minC 844041 - 844712 + | septum site-determining protein minD 844714 - 845508 + | septum formation-inhibiting ATPase, ATPase ParA-type TERM 1303 845763 - 845788 + F 100 -11.9 -5.85737 | ACCGCGATAATATTC GTCCTCTTGGA GTAA TCCGAGGGGAC TTTTTTTATTGGTCT TERM 1304 845866 - 845895 + F 100 -15.1 -5.626 | GAACCGCGATTGATC GCCCTCTTGACGT GTAA ACGTGAAGAGGGC TTTTTTTGTGCAATG LSA0858 845960 - 846601 + | amino acid ABC transporter transmembrane protein ls859 846614 - 847255 + | amino acid ABC transporter ATP-binding protein LSA0860 847252 - 848055 + | amino acid ABC transporter substrate-binding protein cls1 848068 - 849504 + | cardiolipin synthase TERM 1305 849555 - 849507 - T 100 -20 -4.4009 | gap 1, opp_overlap 849508 849520, overlap 849508 849510 849520 GCCCATTTTATAAAA GTAGTCACAAAAAGGCCCTCGAA ATTT TTCGAGGGCCTTTTTGTGA-TAG TGATTATTTGAAATA TERM 1306 849554 - 849508 - T 100 -23.5 -3.23733 | gap 1, opp_overlap 849508 849520, overlap 849507 849510 849520 CCCATTTTATAAAAG TAGTCACAAAAAGGCCCTCGAA ATTT TTCGAGGGCCTTTTTGTGA-TA GTGATTATTTGAAAT TERM 1307 849508 - 849555 + T 100 -21.6 -3.03085 | opp_overlap 849508 849507 849510 849520, overlap 849520 CCCATTTTATAAAAG TAGTCACAAAAAGGCCCTCGAA ATTT TTCGAGGGCCTTTTTGTGATAG TGATTATTTGAAATA TERM 1308 849553 - 849510 - T 100 -24.2 -3.18044 | opp_overlap 849508 849520, overlap 849508 849507 849520 CATTTTATAAAAGTA GTCACAAAAAGGCCCTCGAA ATTT TTCGAGGGCCTTTTTGTGAT AGTGATTATTTGAAA TERM 1309 849520 - 849543 + T 100 -16.8 -4.93296 | opp_overlap 849520 849510 849508 849507, overlap 849508 AAGTAGTCACAAAAA GGCCCTCGAA ATTT TTCGAGGGCC TTTTTGTGATAGTGA TERM 1310 849543 - 849520 - T 100 -16.8 -4.89339 | opp_overlap 849508 849520, overlap 849510 849508 849507 AAGTAGTCACAAAAA GGCCCTCGAA ATTT TTCGAGGGCC TTTTTGTGATAGTGA LSA0862 850881 - 849559 - | N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase) (autolysin) TERM 1311 851139 - 851157 + H 70 -8.8 -3.05715 | opp_overlap 851153, overlap 851156 GACTGCTTTTGAGGT CTGCGTGT CTA ACACGCCG TTGGCTAACAACGTT TERM 1312 851212 - 851235 + H 100 -11.8 -5.8187 | opp_overlap 851211 851214 TACCGTGCATTCAAG CACCCTTGTT CAAC AACAGGGGTG TTTTTTTATTGGGTA hisS 851270 - 852574 + | histidyl-tRNA synthetase TERM 1313 854149 - 854162 + G 76 -8.1 -4.19506 | ATGGATTACGGTTTC CCACC ACAT GGTGG TTTTGCCATTGGCCT aspS 852574 - 854346 + | aspartyl-tRNA synthetase TERM 1314 854399 - 854352 - f 83 -9.2 -3.98716 | opp_overlap 854352 854365, overlap 854354 854365 AAAGGATTAATTAAA TACTCAATAAAAAGGGCTCTCC AAAT GGGGAGTCCTTTTTTGTGAGCA TATTAATCGCTAATT TERM 1315 854352 - 854399 + F 84 -11.4 -3.16264 | opp_overlap 854352 854354 854365, overlap 854365 AAAGGATTAATTAAA TACTCAATAAAAAGGGCTCTCC AAAT GGGGAGTCCTTTTTTGTGAGCA TATTAATCGCTAATT TERM 1316 854397 - 854354 - f 78 -9.6 -3.57246 | opp_overlap 854352 854365, overlap 854352 854365 AGGATTAATTAAATA CTCAATAAAAAGGGCTCTCC AAAT GGGGAGTCCTTTTTTGTGAG CATATTAATCGCTAA TERM 1317 854365 - 854386 + F 100 -10.1 -5.252 | opp_overlap 854365 854354 854352, overlap 854352 AATACTCAATAAAAA GGGCTCTCC AAAT GGGGAGTCC TTTTTTGTGAGCATA TERM 1318 854386 - 854365 - f 81 -5.7 -5.12971 | opp_overlap 854352 854365, overlap 854354 854352 AATACTCAATAAAAA GGGCTCTCC AAAT GGGGAGTCC TTTTTTGTGAGCATA LSA0865 854459 - 854890 + | putative methionine sulfoxide reductase msrA 854890 - 855408 + | protein methionine sulfoxide reductase TERM 1319 855856 - 855868 + G 76 -7.7 -4.07687 | opp_overlap 855866 GTGCGATTTTTGGGG CCGTT ATT AACGG TTTTGGGACCGGGAT TERM 1320 856239 - 856225 - g 84 -3.5 -5.45652 | ACCGCGAAGAAAAAA CGATG TTATT CACCG TTATCTCACGCTTTG LSA0867 855486 - 856364 + | hypothetical protein TERM 1321 856368 - 856404 + F 91 -9.6 -4.42386 | opp_overlap 856368 856373, overlap 856373 AAAATTAAATAACTA TCAAAGGGTCGTCAAT ATTAA ATTGACGGCTCTTTTA TTTTCTGAATAGGCG TERM 1322 856373 - 856399 + F 100 -9.5 -5.19275 | opp_overlap 856373 856368, overlap 856368 TAAATAACTATCAAA GGGTCGTCAAT ATTAA ATTGACGGCTC TTTTATTTTCTGAAT nfo 856511 - 857413 + | endonuclease IV LSA0869 857397 - 857480 + | hypothetical protein TERM 1323 857662 - 857652 - g 73 -5.4 -4.62069 | overlap 857654 TGGTGAGCCTAAAAA GTTG GTG CAAC CACAAGTGGCCGTTA LSA0870 857470 - 859275 + | hypothetical protein LSA0871 859376 - 860050 + | putative nitroreductase (oxidoreductase) TERM 1324 860034 - 860065 + T 100 -13.9 -4.43309 | opp_overlap 860034 TTAAACATAAAAAAA GACCTCGGATAAA TTAAAT TTTGTCCGAGGTC TTTTAATTGGGATTA TERM 1325 860065 - 860034 - T 100 -11.7 -5.88197 | opp_overlap 860034 TTAAACATAAAAAAA GACCTCGGATAAA TTAAAT TTTGTCCGAGGTC TTTTAATTGGGATTA LSA0872 860920 - 860078 - | hypothetical protein TERM 1326 860180 - 860190 + g 70 -5.4 -4.51378 | overlap 860161 GGCGACGTTGATGAC TTGG CAA CCAA TTTTATCATATAAAT rpsU 861130 - 861306 + | 30S ribosomal protein S21 LSA0874 861331 - 861774 + | hypothetical protein TERM 1327 861781 - 861806 + F 100 -14.1 -5.60993 | TTGAGTTAATTTTTG GTAGGACTTCC CGCG GGAGGTCCTAC TTTTTTTGTGGCAAA TERM 1328 862899 - 862889 - g 79 -6.8 -4.68384 | opp_overlap 862889 ATTTACCTAATAAAA CCCA GAG TGGG TTAGTACAAGCGGAA phoH 862069 - 863037 + | phosphate starvation-inducible protein, PhoH LSA0876 863047 - 863523 + | hypothetical protein dgkA 863501 - 863902 + | diacylglycerol kinase LSA0878 863938 - 864840 + | putative GTP-binding protein TERM 1329 865652 - 865630 - g 100 -9.9 -5.68023 | CCACAATTAAAAAAA GTGCCGTCA GAAAT TGACAGCAC ACCAAAAGACGACTA recO 864850 - 865668 + | DNA repair protein O TERM 1330 865842 - 865868 + F 100 -7.3 -5.60993 | overlap 865843 ACCGCGAGAAATCGT CCCTATGTGAC TAACT GTCGCATAGGC TTTTTTTATGCGCAA TERM 1331 865843 - 865867 + F 89 -10.8 -3.95873 | overlap 865842 CCGCGAGAAATCGTC CCTATGTGAC TAACT GTCGCATAGG CTTTTTTTATGCGCA glyQ 865906 - 866823 + | glycyl-tRNA synthetase subunit alpha TERM 1332 868538 - 868526 - g 70 -7.7 -3.57561 | opp_overlap 868532 TTTGAAGCCGCTAAA GTGCT CTC AGCAC ATCAAGATGATGCTG glyS 866816 - 868897 + | glycyl-tRNA synthetase, beta subunit LSA0882 868922 - 869284 + | hypothetical protein TERM 1333 869369 - 869393 + F 86 -9.3 -4.20042 | opp_overlap 869369 CTGATAATCCTAAGA GTCGCATTTCA TTG TGAGGTGCGGC TTTTACAGTCTTAGT TERM 1334 871249 - 871232 - g 71 -3.4 -5.07971 | overlap 871225 871234 TAAAAGAAGCAAAAA TCGCCT TAAAAG AGGCAA CTAAATTAGGCAATC dnaG 869440 - 871323 + | DNA primase G TERM 1335 871444 - 871432 - g 74 -4.1 -5.08015 | overlap 871433 AACCCAAAAAAGAAA TCACC AAT GATGA ATTAGTGGCAAAAAT TERM 1336 871588 - 871578 - g 90 -4 -5.58454 | overlap 871586 GCCACATTAAAAAAA GAAA AAG TTTC TGCTAAAGAATTAAA TERM 1337 871838 - 871818 - g 83 -11.3 -3.05384 | GGCCGTGGCATGCAA TTCTTGGAT TTA ATCCAAGAA GGGAACATGGGCTTA TERM 1338 872266 - 872254 - g 76 -7.7 -4.16767 | overlap 872241 AAGAACAATTAGAAA GTGTC CTA GACAC CTTAACAGATCGTGA sigA 871347 - 872456 + | RNA polymerase sigma factor RpoD TERM 1339 872468 - 872489 + T 100 -13.1 -4.98531 | opp_overlap 872468 ATAAATTCAAAAAAA CGGTCATCT AAAA AGATGACCG TTTTTAATTTGGACA TERM 1340 872489 - 872468 - T 100 -13.1 -5.59564 | opp_overlap 872468 ATAAATTCAAAAAAA CGGTCATCT AAAA AGATGACCG TTTTTAATTTGGACA LSA0885 872770 - 872576 - | hypothetical protein TERM 1341 873633 - 873620 - g 71 -2.4 -5.15969 | overlap 873621 CGCCAACTGAAAAAA TTGC TACAGT GCAA CATGAAATTCAATTA LSA0886 872971 - 873678 + | hypothetical protein LSA0887 873666 - 874799 + | hypothetical protein TERM 1342 875065 - 875077 + G 71 -3.3 -4.98522 | opp_overlap 875065 TATCGATAAAAAAGT GCCAA CAA TGGGC TTTTTATCTCACGTT pepT 874844 - 876085 + | peptidase T TERM 1343 876125 - 876098 - T 100 -8.5 -5.51046 | opp_overlap 876098 TAAAGATATAAAAAA GAGTCCAACAA TTCAAT TTGTTGGGCTC TTTTTATGCTTAATT TERM 1344 876098 - 876125 + T 100 -10.7 -5.00765 | opp_overlap 876098 TAAAGATATAAAAAA GAGTCCAACAA TTCAAT TTGTTGGGCTC TTTTTATGCTTAATT aroD 876862 - 876140 - | 3-dehydroquinate dehydratase (Type I DHQase) TERM 1345 876730 - 876757 + g 100 -8.5 -5.96521 | gap 1, opp_overlap 876730 CTTGCCAATAATCAA GGCGCCATTCGA GAATA TCGA-TGGCGTC TTTTTTTTGATTGAT TERM 1346 876900 - 876925 + r 73 -9.1 -3.46068 | gap 1, overlap 876897 GAGATTGATCGATAT GGTTGACGAGAT ATT GTC-CGTCAACC TGTTTGAATTCCCAG LSA0890 877599 - 876880 - | lipoprotein precursor TERM 1347 877411 - 877397 - G 93 -10 -4.37092 | overlap 877400 AGGTTGTTGAGAAAA CTACGG GGC CCGTAG TAACCCCGGCGACCG TERM 1348 877723 - 877701 - R 100 -10.6 -5.63374 | opp_overlap 877700 877701 TTAACATTAAAAAAA GAGCCGGGAT TTT ATCCCAACTC CTTTTTATGATCGTT LSA0891 878570 - 877746 - | putative lipase/esterase TERM 1349 878722 - 878707 - H 73 -5.4 -4.57073 | opp_overlap 878707 GAGTGCTTTTAAAAA CGACTT TAAA AAGCCG ATTATTTAAAGTATG aroE 878761 - 879633 + | shikimate 5-dehydrogenase aroH 879630 - 880625 + | 3-deoxy-7-phosphoheptulonate synthase aroB 880628 - 881695 + | 3-dehydroquinate synthase aroK 881773 - 882303 + | shikimate kinase TERM 1350 882283 - 882307 + F 100 -11.5 -5.63374 | opp_overlap 882283 CGTATTCAAAAAAAA CTGGCTAAGCG ACA TGCTTAGTCAG TTTTTTTAATATTAA TERM 1351 882307 - 882283 - f 100 -8.6 -5.81412 | opp_overlap 882283 CGTATTCAAAAAAAA CTGGCTAAGC GACAT GCTTAGTCAG TTTTTTTAATATTAA sodA 882391 - 882990 + | Iron/manganese superoxide dismutase TERM 1352 883098 - 883075 - T 100 -11.1 -5.35354 | opp_overlap 883075 TAGATAATCAAAAAA GCATTCGCT GAAACT AGCGAATGC TTTTTATTTTAGAGA TERM 1353 883075 - 883098 + T 100 -11.8 -5.45802 | opp_overlap 883075 TAGATAATCAAAAAA GCATTCGCTG AAAC TAGCGAATGC TTTTTATTTTAGAGA pepD5 884543 - 883107 - | U34 family dipeptidase D TERM 1354 884426 - 884440 + g 74 -10 -3.19081 | overlap 884423 TCACCATGTGTTTAG GCCAAG CAG CTTGGC TATCTTCGTTCCGTG TERM 1355 884783 - 884768 - g 75 -3.2 -5.10029 | opp_overlap 884773, overlap 884770 884773 AGCAATCTCAAAAAA CACAGG GGCA CCTGCA GAACACGTGCACGTT LSA0898 884676 - 884864 + | 4-oxalocrotonate tautomerase TERM 1356 884949 - 884900 - T 87 -12.3 -3.21099 | opp_overlap 884908, overlap 884902 884908 GGCTTTGAGGATTAA CAGTAAAATTGGGAATTATGGGG GGTT CGCCATGATTCCCAATTTTGCAG TTAACCGGAAAAGGC TERM 1357 884947 - 884902 - T 95 -13.5 -3.17051 | opp_overlap 884908, overlap 884900 884908 CTTTGAGGATTAACA GTAAAATTGGGAATTATGGGG GGTT CGCCATGATTCCCAATTTTGC AGTTAACCGGAAAAG TERM 1358 884941 - 884908 - T 95 -11.1 -4.44797 | opp_overlap 884908, overlap 884902 884900 GGATTAACAGTAAAA TTGGGAATTATGGGG GGTT CGCCATGATTCCCAA TTTTGCAGTTAACCG TERM 1359 884908 - 884941 + T 100 -13.3 -4.19238 | opp_overlap 884902 884900 884908 GGATTAACAGTAAAA TTGGGAATTATGGGG GGTT CGCCATGATTCCCAA TTTTGCAGTTAACCG TERM 1360 884986 - 885033 + T 82 -11.5 -2.75845 | opp_overlap 884997, overlap 884997 AGGAGCACGTTTAAG CCATTTAAAAAGCGATTCGAC AATTTA GTCGGATCGCTTTTTGATTAG TCCATTTTAAAATAT TERM 1361 885022 - 884997 - T 90 -9 -4.68424 | opp_overlap 884986 884997 TAAGCCATTTAAAAA GCGATTCGAC AATTTA GTCGGATCGC TTTTTGATTAGTCCA TERM 1362 884997 - 885022 + T 100 -11.2 -4.90266 | opp_overlap 884997, overlap 884986 TAAGCCATTTAAAAA GCGATTCGAC AATTTA GTCGGATCGC TTTTTGATTAGTCCA LSA0899 885836 - 885030 - | haloacid dehalogenase family hydrolase TERM 1363 885955 - 885942 - H 70 -5.3 -4.40181 | AAACAGTATAATAAA GCTAT TGAA ATAGC GTAGGAGGCAGTCAG TERM 1364 886031 - 886055 + G 70 -9.3 -2.80195 | opp_overlap 886031, overlap 886028 GAAGATTTAAAGGAA CGGATTTTAGC AGC GCTAGAAACCG TGATTGATCCTGAAT LSA0900 885971 - 886318 + | hypothetical protein LSA0901 886397 - 887182 + | hypothetical protein LSA0902 887205 - 888170 + | hypothetical protein TERM 1365 888187 - 888175 - T 73 -3.4 -5.15634 | overlap 888179 CAGCGCACTAAAAAA GCAA GTTAG TTGC TAGACAACTGACTGA TERM 1366 888242 - 888286 + T 100 -19.6 -5.19998 | opp_overlap 888256 888258 ACTTTAAGCAGCTTT CTGGGTTGTAAAAATTCGGT ATTCA ACCGGACTTTTACAACCCAG TTTTGTTTTAATTCT tnpB3-ISLsa2 889042 - 888230 - | IS150 family transposase TERM 1367 888363 - 888328 - G 86 -10.6 -3.79445 | opp_overlap 888328 AATCATCAATCCAAA CCGATATTTGTGAAAC TAGC GTTTCATAAGTATCGG TTTCTTTTTGGTAGA TERM 1368 888328 - 888363 + g 100 -15 -4.91852 | opp_overlap 888328 AATCATCAATCCAAA CCGATATTTGTGAAAC TAGC GTTTCATAAGTATCGG TTTCTTTTTGGTAGA tnpA3C-ISLsa2 889242 - 889084 - | transposase tnpA3N-ISLsa2 889401 - 889249 - | transposase TERM 1369 889611 - 889644 + r 100 -18.3 -3.18199 | opp_overlap 889611 TGGTCAATATAAAAA CCCCCGGTATTGGAT TTTG GTCCAATATCGGGGG TTCACTTCAGACTTG TERM 1370 889644 - 889611 - R 100 -15.4 -5.0916 | opp_overlap 889611 TGGTCAATATAAAAA CCCCCGGTATTGGA TTTTGG TCCAATATCGGGGG TTCACTTCAGACTTG idi 890721 - 889672 - | isopentenyl pyrophosphate isomerase TERM 1371 890643 - 890619 - G 72 -7.9 -3.76186 | opp_overlap 890616 890642, overlap 890615 890630 GATGGATAAAACGAA GGCCGTCAAAA TCG TTTTGACGATC ATCTTGATGAAATTT mvaK2 891837 - 890734 - | phosphomevalonate kinase TERM 1372 891417 - 891407 - G 74 -4.6 -4.85599 | opp_overlap 891407, overlap 891414 TCGAGTTTATAAAAA GCAC AGA GCGC TTTGACTGTCGCTAC mvaD 892817 - 891843 - | diphosphomevalonate decarboxylase mvaK1 893787 - 892840 - | mevalonate kinase TERM 1373 894338 - 894313 - g 71 -4.7 -4.7373 | opp_overlap 894294 894315 GTATTTTATGAAAAA TACGCCGTATT ACCA AATTCCGCGTA TCTCGACGGCCGGTT rexB 894068 - 897628 + | ATP-dependent exonuclease, subunit B (ATP-dependent exonuclease, subunit B) TERM 1374 897941 - 897962 + G 74 -4.6 -4.86822 | overlap 897937 TACACTGCATGCCTT TTGTTTAA AGGTCA TTAAACAA TTTTATTATGTCATT TERM 1375 898148 - 898170 + G 75 -5.5 -4.7629 | opp_overlap 898151 CTCGAATGATCGTAA CGATGACGG CCTGA CCGACATTG TTTTTGAGTTGCTCG TERM 1376 899688 - 899670 - g 74 -8.1 -4.03093 | opp_overlap 899683, overlap 899663 TATAATGAGCAGAAA GTCGGCC ACTTA GGCCAAC AAGTGATGCAGAAGC rexAN 897612 - 900284 + | ATP-dependent exonuclease, subunit A (N terminal fragment), authentic frameshift rexAC 900301 - 901356 + | ATP-dependent exonuclease, subunit A (C terminal fragment), authentic frameshift TERM 1377 902794 - 902782 - g 74 -6.3 -4.48713 | opp_overlap 902788 CGGATGAACAACAAA TTTGG GGA CCAAA ACCTTACTTGGTCTT TERM 1378 903876 - 903892 + G 73 -5.9 -4.52857 | overlap 903877 GGACACGATTCGGTC TTACTAG CAA CTAGTAG TTTTGTCTCAGGGGT TERM 1379 903998 - 903971 - g 72 -9.2 -3.07935 | opp_overlap 903978 ATTTGATGCACCCAA TGCATTACAGAC GCGT GTCCGTTATGCA CAATTAGCTGCCCAA LSA0912 901422 - 904256 + | ATP-dependent helicase LSA0913 904334 - 904810 + | extracellular protein precursor asnC 904921 - 906219 + | asparaginyl-tRNA synthetase TERM 1380 906276 - 906249 - f 93 -12.2 -4.14511 | gap 1, opp_overlap 906249 AAGTGTATTTTAAAA GCATGTC-GTCAA TTA TTGACCGACATGC TTTTTTATTTTCTCA TERM 1381 906249 - 906276 + F 100 -12.2 -5.86976 | gap 1, opp_overlap 906249 AAGTGTATTTTAAAA GCATGTC-GTCAA TTA TTGACCGACATGC TTTTTTATTTTCTCA dnaD 906340 - 906963 + | DNA replication protein DnaD (primosomal protein DnaD) LSA0916 906987 - 907637 + | putative DNA repair protein, endonuclease III TERM 1382 907706 - 907664 - T 95 -7.4 -5.40474 | gap 3, opp_overlap 907664 ATCTTTGGAAAAAAA TAGCCTGATTGTCCGAACTCT TAAT AGAGT--G-ACAATCAGGCTA TTTTTAATTAGTGTG TERM 1383 907664 - 907706 + T 85 -7.4 -4.91873 | gap 3, opp_overlap 907664 ATCTTTGGAAAAAAA TAGCCTGATTGTCCGAACTCT TAAT AGAGT--G-ACAATCAGGCTA TTTTTAATTAGTGTG pbp1A 910017 - 907714 - | bifunctional glycosyltransferase/transpeptidase penicillin-binding protein 1A TERM 1384 909934 - 909969 + g 80 -9 -4.07107 | opp_overlap 909933 909935, overlap 909935 909966 CCCCCATTTGATAAT ACGGCCAAATAGCG ATTTAGTA CGCTTTTTGGCCGG TTTCTGGTGTCTTGT TERM 1385 909968 - 909935 - G 93 -12.5 -3.23393 | opp_overlap 909934 909935 909966, overlap 909933 CCCCATTTGATAATA CGGCCAAATAGCG ATTTAGTA CGCTTTTTGGCCG GTTTCTGGTGTCTTG TERM 1386 909935 - 909968 + g 93 -12.5 -3.0318 | opp_overlap 909935 909933, overlap 909934 909966 CCCCATTTGATAATA CGGCCAAATAGCG ATTTAGTA CGCTTTTTGGCCG GTTTCTGGTGTCTTG recU 910656 - 910024 - | Holliday junction-specific endonuclease LSA0919 910732 - 911292 + | hypothetical protein TERM 1387 911537 - 911515 - g 79 -7 -4.731 | AACTTATCAAGAAAA TATCGATCGT TTA ACGGCCGATA ATACCCGCTTATTTA LSA0920 911372 - 911752 + | DivIVA domain-containing protein TERM 1388 912178 - 912200 + F 100 -9.9 -5.27335 | gap 1, opp_overlap 912176 912175, overlap 912179 GGTTTACAAACAGGT G-GCTTGGGC TTTT GCCCAAGCTC TTTTTATTTAAAAAA TERM 1389 912179 - 912198 + F 100 -13.6 -4.27026 | opp_overlap 912176 912175, overlap 912178 GTTTACAAACAGGTG GCTTGGGC TTTT GCCCAAGC TCTTTTTATTTAAAA LSA0921 912242 - 913393 + | putative adenine-specific DNA methyltransferase serA 913496 - 914449 + | D-3-phosphoglycerate dehydrogenase TERM 1390 914454 - 914486 + T 100 -15.2 -4.98857 | opp_overlap 914454 CTGGTTACTAAAAAA TAAGACTTAACACT ATATC AGTGTTAAGTCTTA TTTTTGTGGTTAAAT TERM 1391 914486 - 914454 - T 100 -15.9 -5.14563 | opp_overlap 914454 CTGGTTACTAAAAAA TAAGACTTAACACTA TAT CAGTGTTAAGTCTTA TTTTTGTGGTTAAAT LSA0923 914893 - 914504 - | putative phage envelope protein TERM 1392 914639 - 914627 - G 72 -6.3 -4.40358 | opp_overlap 914627 914626 AGCTAGCTCACAAAA CACTT CAA AAGTG ATTTGACCAGTCTGC LSA0924 915240 - 915824 + | site-specific recombinase phage integrase family protein TERM 1393 915817 - 915831 + F 71 -8.6 -3.18274 | AACAATTGGCAATCG GCCTTT AAA AAAGGC TTGCCTTAAAGTGAG adh 915956 - 916996 + | putative zinc-containg alcohol dehydrogenase (oxidoreductase) LSA0926 917018 - 917173 + | hypothetical protein TERM 1394 917214 - 917188 - T 100 -15.2 -5.08169 | opp_overlap 917188 ATATAGCTCAAAAAA GCCGTTCGGATA ATT TATCCGGACGGC TTTTTATGTATTTTT TERM 1395 917188 - 917214 + T 100 -17.4 -5.20633 | opp_overlap 917188 ATATAGCTCAAAAAA GCCGTTCGGATA ATT TATCCGGACGGC TTTTTATGTATTTTT LSA0927 917983 - 917228 - | integral membrane protein LSA0928 918783 - 917980 - | hypothetical protein TERM 1396 918277 - 918264 - G 82 -2.3 -5.74086 | opp_overlap 918267, overlap 918265 918266 AAATTAAATAAAAAA GGGCA CTAA TGCCA TTAGCGGTTTCTGCA LSA0929 919156 - 919314 + | hypothetical protein LSA0930 919307 - 920179 + | ABC transporter ATP-binding protein LSA0931 920172 - 920918 + | integral membrane protein TERM 1397 920961 - 920924 - f 77 -10 -3.18274 | opp_overlap 920928, overlap 920926 920928 TTCAGCTTAATTGAA TATAGTCGGGTAATGA TGATAG TCATTACCCGACTTTT TGTTCCCAGATTGTT TERM 1398 920959 - 920926 - f 90 -12.6 -3.15354 | opp_overlap 920928, overlap 920924 920928 CAGCTTAATTGAATA TAGTCGGGTAATGA TGATAG TCATTACCCGACTT TTTGTTCCCAGATTG TERM 1399 920957 - 920928 - f 100 -15.2 -3.1352 | opp_overlap 920928, overlap 920926 920924 GCTTAATTGAATATA GTCGGGTAATGA TGATAG TCATTACCCGAC TTTTTGTTCCCAGAT TERM 1400 920928 - 920957 + F 100 -15.9 -5.06816 | opp_overlap 920926 920924 920928 GCTTAATTGAATATA GTCGGGTAATGAT GATA GTCATTACCCGAC TTTTTGTTCCCAGAT LSA0932 921033 - 921080 + | hypothetical protein LSA0933 921116 - 921769 + | hypothetical protein TERM 1401 921773 - 921817 + T 93 -12.4 -4.08164 | opp_overlap 921778 921780, overlap 921778 ATCATCGCGTAAAAG AAAAAGGGGCTAAGACAAAA GTAAA TTTTGTCTCAGCCTCTTTTA TTTATCTGAACTTTT TERM 1402 921812 - 921778 - T 100 -12.3 -5.45802 | opp_overlap 921773 921778, overlap 921780 CGCGTAAAAGAAAAA GGGGCTAAGACAAAA GTAAA TTTTGTCTCAGCCTC TTTTATTTATCTGAA TERM 1403 921778 - 921812 + T 100 -12.3 -5.05113 | opp_overlap 921778 921780, overlap 921773 CGCGTAAAAGAAAAA GGGGCTAAGACAAAA GTAAA TTTTGTCTCAGCCTC TTTTATTTATCTGAA TERM 1404 921810 - 921780 - T 90 -13.5 -2.90754 | opp_overlap 921778 921773, overlap 921778 CGTAAAAGAAAAAGG GGCTAAGACAAAA GTAAA TTTTGTCTCAGCC TCTTTTATTTATCTG TERM 1405 921911 - 921881 - T 74 -8.4 -3.66178 | opp_overlap 921876 921881 921884 921888, overlap 921884 921888 921889 CCGGTTAACCCTAAA TATCAAACGATTGC TAC GCAATCATTCGCTA TTTTGTGTTAATCCT TERM 1406 921908 - 921884 - T 74 -10.1 -2.64412 | opp_overlap 921884 921881 921876 921888, overlap 921881 921888 921889 GTTAACCCTAAATAT CAAACGATTGC TAC GCAATCATTCG CTATTTTGTGTTAAT TERM 1407 921904 - 921888 - T 73 -7.3 -4.00934 | opp_overlap 921884 921881 921876 921888, overlap 921884 921881 921889 ACCCTAAATATCAAA CGATTGC TAC GCAATCA TTCGCTATTTTGTGT TERM 1408 921903 - 921889 - T 70 -8.6 -2.99837 | opp_overlap 921888 921884 921881 921876, overlap 921888 921884 921881 CCCTAAATATCAAAC GATTGC TAC GCAATC ATTCGCTATTTTGTG lplA 922992 - 921979 - | lipoate-protein ligase TERM 1409 923076 - 923110 + r 77 -10.2 -3.25223 | opp_overlap 923081, overlap 923081 AAAAGGAAGTTACTA AAAAACCCGGATAA TGGTCAT TTATCCGGGTTTTC TTAATCATCTACATA TERM 1410 923105 - 923081 - R 100 -10.1 -5.18357 | opp_overlap 923076 923081 GAAGTTACTAAAAAA CCCGGATAA TGGTCAT TTATCCGGG TTTTCTTAATCATCT TERM 1411 923081 - 923105 + r 100 -10.1 -4.74215 | opp_overlap 923081, overlap 923076 GAAGTTACTAAAAAA CCCGGATAA TGGTCAT TTATCCGGG TTTTCTTAATCATCT LSA0935 923317 - 923111 - | XRE family DNA-binding protein LSA0936 923797 - 923330 - | putative drug ABC exporter, membrane-spanning/permease subunit LSA0937 924579 - 923908 - | putative drug ABC exporter, membrane-spanning/permease subunit LSA0938 925635 - 924694 - | putative drug ABC exporter, ATP-binding subunit TERM 1412 925527 - 925542 + g 82 -3.2 -5.53288 | opp_overlap 925527, overlap 925515 925512 925508 CATTTGGGCCTAAGA GGCCAA ATAT TTCGCC TTTTTTTACATTGAA TERM 1413 925650 - 925678 + H 77 -10.5 -2.80816 | opp_overlap 925658, overlap 925653 925658 TATTAGCGCCTCCTC ATATTTAATCAGG TCA CCTGATTAAATAA TATAGTAAGTCCCCC TERM 1414 925653 - 925675 + H 83 -12.2 -2.66964 | opp_overlap 925658, overlap 925650 925658 TAGCGCCTCCTCATA TTTAATCAGG TCA CCTGATTAAA TAATATAGTAAGTCC TERM 1415 926196 - 926182 - g 70 -7.1 -3.78785 | overlap 926176 TGACAAAAATCACAA CAGCG ATGTA CGCTG ATATCGACGCGTCTA LSA0939 925773 - 926279 + | MarR family transcriptional regulator TERM 1416 926295 - 926326 + T 100 -12.4 -5.29385 | opp_overlap 926295 ATGGCAATCAAAAAA GCGAGTCTCACTAA TTTC TTAGTGAAGCTCGC TTTTTTAGTTAGATT TERM 1417 926326 - 926295 - T 100 -12.4 -5.27477 | opp_overlap 926295 ATGGCAATCAAAAAA GCGAGTCTCACTAA TTTC TTAGTGAAGCTCGC TTTTTTAGTTAGATT nrdF 927303 - 926347 - | ribonucleotide-diphosphate reductase subunit beta TERM 1418 927557 - 927524 - R 78 -7.7 -4.27316 | opp_overlap 927519 927524 CCGCTTAATCTAAAA TTTCAAATAATCCCA AAAC CAAGATTATTTGAAA TTTTGTATTAATGCT TERM 1419 927524 - 927557 + r 73 -5.6 -4.71186 | opp_overlap 927524, overlap 927519 CCGCTTAATCTAAAA TTTCAAATAATC CCAAAACCAA GATTATTTGAAA TTTTGTATTAATGCT nrdE 929898 - 927727 - | ribonucleotide-diphosphate reductase subunit alpha TERM 1420 928054 - 928072 + g 71 -4.6 -4.65078 | ACCTGGTGCTGGGTA GTAAATTG TCC CAATTTTC TTTTCTTGGCGATCT TERM 1421 929988 - 929956 - R 100 -9.3 -5.40072 | gap 1, opp_overlap 929967, overlap 929961 TTGGGTGTAAAAAAA GTGAAGACCAACTC TTCAAG GAGTTGGTC-CCAC TCGTAGATGCCTATT TERM 1422 929984 - 929961 - R 84 -11.1 -3.58247 | opp_overlap 929967, overlap 929956 TGTAAAAAAAGTGAA GACCAACTC TTCAAG GAGTTGGTC CCACTCGTAGATGCC nrdH 930253 - 930023 - | ribonucleotide reductase, NrdH-redoxin TERM 1423 930376 - 930355 - R 100 -13.1 -4.68645 | opp_overlap 930357 TAGTTAAAAGTAAAA CAGCCACTA ATTA TAGTGGCTG TTCGCGAATGATTCT TERM 1424 930357 - 930374 + r 76 -9.9 -3.03619 | opp_overlap 930355 GTTAAAAGTAAAACA GCCACTA ATTA TAGTGGC TGTTCGCGAATGATT cls2 932030 - 930573 - | cardiolipin synthase LSA0944 932499 - 932116 - | putative ribonuclease H TERM 1425 932142 - 932154 + g 71 -4.8 -4.65933 | overlap 932136 AGGCTTGTTGTGCGA GGTG GTGCG CACC TTTATTTTGCCGATC TERM 1426 932455 - 932439 - G 93 -8.7 -4.48987 | CGGTCACAATCAAAA TCCCAGC TGC ACTGGGA CCGGGATTGCCAAGT LSA0945 932575 - 932991 + | hypothetical protein TERM 1427 933042 - 932996 - T 100 -8.8 -5.34055 | gap 1, opp_overlap 932998, overlap 932998 ATAAACAGTAAAAAA TAGAGGACTCGTG-CAAAACG TAAAAT CGTTTTGGCGCGGGTCCTCTT TTTTAATATCGTTAA TERM 1428 932998 - 933040 + T 100 -15.8 -5.2422 | gap 1, opp_overlap 932996 932998 AAACAGTAAAAAATA GAGGACTCGTG-CAAAACG TAAAAT CGTTTTGGCGCGGGTCCTC TTTTTTAATATCGTT TERM 1429 933040 - 932998 - T 91 -11.4 -4.27753 | gap 1, opp_overlap 932998, overlap 932996 AAACAGTAAAAAATA GAGGACTCGTG-CAAAACG TAAAAT CGTTTTGGCGCGGGTCCTC TTTTTTAATATCGTT csp4 933260 - 933054 - | cold shock protein CspA family protein TERM 1430 933299 - 933282 - H 74 -9.9 -2.60496 | opp_overlap 933271 933282, overlap 933267 933281 933279 CCCTCCTCTAAAGAG TGGTGTG TCAA CACACCA TTGTCATTGTGCCAA TERM 1431 933282 - 933299 + H 80 -9.9 -3.56325 | opp_overlap 933267 933282 933281 933279, overlap 933271 CCCTCCTCTAAAGAG TGGTGTG TCAA CACACCA TTGTCATTGTGCCAA fhs 933463 - 935136 + | formate-tetrahydrofolate ligase (formyltetrahydrofolate synthetase) lspA 935242 - 935697 + | Signal peptidase II (lipoprotein signal peptidase) (prolipoprotein signal peptidase) rluA2 935690 - 936595 + | pseudouridylate synthase, 23S rRNA-specific TERM 1432 936725 - 936750 + F 100 -13.4 -5.4505 | opp_overlap 936720 AGTCTCAAACTGTAA CCTCTCAACC AATATC GGTTGAGAGG TTTTTTGTTGGAAGG TERM 1433 936827 - 936814 - g 71 -6.7 -4.12267 | opp_overlap 936813 AGCACAACAATGAAA CGTGT TTTT ACACG GATTACTTACGAGAT pyrR 936778 - 937317 + | pyrimidine regulatory protein PyrR TERM 1434 937416 - 937442 + F 100 -7.2 -5.61596 | opp_overlap 937416 CACTATGCGTCCAAA GGACATACCCGC AGA GTAGGGATGTCC TTTTTTTATCGCCAT pyrP 937492 - 938796 + | Uracil:cation symporter pyrB 938789 - 939706 + | aspartate carbamoyltransferase catalytic subunit pyrC 939718 - 941007 + | dihydroorotase pyrAA 941011 - 942087 + | carbamoyl phosphate synthase small subunit TERM 1435 943763 - 943736 - g 73 -3.5 -4.92757 | overlap 943741 CTATGAACAAGAAAA TGAAAGTTTAG TGTCCG CTAAACCATCA ATCTTAGTCATCGGT pyrAB 942105 - 945287 + | carbamoyl-phosphate synthase, catalytic subunit TERM 1436 945325 - 945362 + F 78 -10.7 -3.06831 | gap 1, opp_overlap 945330, overlap 945330 ATATTCTGAGCATTA TTAAAGCGCCAAGGGCCG CCT TGGTC-TTGGCGCTTTTA TTACATAAAAATTCA TERM 1437 945357 - 945330 - f 72 -7.7 -3.80573 | gap 1, opp_overlap 945330 945325 CTGAGCATTATTAAA GCGCCAAGGGCC GCCTT GGTC-TTGGCGC TTTTATTACATAAAA TERM 1438 945330 - 945357 + F 95 -10.6 -4.67982 | gap 1, opp_overlap 945330, overlap 945325 CTGAGCATTATTAAA GCGCCAAGGGCCG CCT TGGTC-TTGGCGC TTTTATTACATAAAA pyrDA 945392 - 946183 + | dihydroorotate oxidase, electron transfer subunit TERM 1439 947045 - 947024 - g 71 -9.5 -3.01712 | opp_overlap 947023 TTGCTTGTCCCAATA TCATCAAGG CGCT CCCTGATGA ACTTGCTAAGTACGA pyrDB 946183 - 947106 + | dihydroorotate oxidase, catalytic subunit TERM 1440 947716 - 947698 - g 75 -5.2 -4.83593 | overlap 947701 AATAACGACCAAAAA CGAGCGGT CAC ACCACTTG AAGCTGCTCAAATGC pyrF 947110 - 947829 + | orotidine-5'-phosphate decarboxylase pyrE 947826 - 948464 + | orotate phosphoribosyltransferase TERM 1441 948605 - 948574 - T 100 -13.1 -5.59655 | opp_overlap 948574 TAAACCAACAAAAAA GCGTTCCGTCAAA ATTTAA TTTGGCGGAACGC TTTTTAATTATGCTT TERM 1442 948574 - 948605 + T 100 -15.3 -4.95876 | opp_overlap 948574 TAAACCAACAAAAAA GCGTTCCGTCAAA ATTTAA TTTGGCGGAACGC TTTTTAATTATGCTT LSA0960 950328 - 948613 - | putative fibronectin/fibrinogene-binding protein TERM 1443 949381 - 949391 + g 82 -3.2 -5.47914 | ATCGGCACTATCGGC TGCT TTA AGCG TTTTTTGTAGTTTTT LSA0961 950590 - 951459 + | hypothetical protein TERM 1444 951483 - 951514 + T 100 -14.7 -5.35354 | opp_overlap 951483 AATGCTTTAAAAAAA TGGTTTACAGCAA TTAAGT TTGCTGTAAACCA TTTTTTAGTTATATA TERM 1445 951514 - 951483 - T 100 -14.7 -5.41746 | opp_overlap 951483 AATGCTTTAAAAAAA TGGTTTACAGCAA TTAAGT TTGCTGTAAACCA TTTTTTAGTTATATA LSA0962 952043 - 951543 - | hypothetical protein TERM 1446 951721 - 951740 + g 78 -9.3 -3.69684 | opp_overlap 951712, overlap 951737 TCATAAGCTTCACCC GCCCTAG TATTAT CTAGGGC TTGTTGAATCCCTTT TERM 1447 951737 - 951752 + g 71 -3.2 -5.0133 | opp_overlap 951712, overlap 951721 CCCTAGTATTATCTA GGGCTT GTTG AATCCC TTTTTTGCAGACGTC TERM 1448 952115 - 952129 + H 80 -5.8 -4.90013 | CATTTGTCACGTACG TAGAAT GCA ATTCTA TTTTTAGTTGACTTA LSA0963 952198 - 952842 + | integral membrane protein, hemolysin III related LSA0964 952871 - 953713 + | hypothetical protein TERM 1449 953724 - 953744 + F 100 -10.5 -5.58209 | opp_overlap 953724 953727 AATAGTATCACCAAA GAACGTCTT CAT GAGACGTTC TTTTTTTGCGTTTAA TERM 1450 953744 - 953724 - f 84 -9.8 -3.81689 | opp_overlap 953724, overlap 953727 AATAGTATCACCAAA GAACGTCT TCATG AGACGTTC TTTTTTTGCGTTTAA LSA0965 953839 - 954420 + | TerR family transcriptional regulator LSA0966 954422 - 955429 + | putative Zinc-containing alcohol dehydrogenase (oxidoreductase) TERM 1451 955476 - 955444 - f 100 -10.6 -4.83759 | opp_overlap 955444 AAGTAAATCTAAAAA GCCCAGCTATTGGT ATTTA ACCAGTATCTGGGC TTTTTTTAAATGGCC TERM 1452 955444 - 955476 + F 100 -12.8 -5.47218 | opp_overlap 955444 AAGTAAATCTAAAAA GCCCAGCTATTGGT ATTTA ACCAGTATCTGGGC TTTTTTTAAATGGCC TERM 1453 956152 - 956187 + F 100 -15.8 -2.80074 | opp_overlap 956152 956155, overlap 956155 TTAAAATTCGCCAAA CAAGTGTTGTTAAAAT TATG GTTTTAACAACACTTG TAGTATTCTCGCCGC TERM 1454 956187 - 956152 - f 100 -15.1 -3.60818 | opp_overlap 956152 956155, overlap 956155 TTAAAATTCGCCAAA CAAGTGTTGTTAAAA TTATGG TTTTAACAACACTTG TAGTATTCTCGCCGC TERM 1455 956155 - 956184 + F 87 -11.7 -3.54771 | opp_overlap 956155 956152, overlap 956152 AAATTCGCCAAACAA GTGTTGTTAAAAT TATG GTTTTAACAACAC TTGTAGTATTCTCGC TERM 1456 956184 - 956155 - f 89 -11 -3.92832 | opp_overlap 956152 956155, overlap 956152 AAATTCGCCAAACAA GTGTTGTTAAAA TTATGG TTTTAACAACAC TTGTAGTATTCTCGC xerS 956249 - 957307 + | site-specific tyrosine recombinase XerS TERM 1457 957463 - 957482 + F 100 -7.2 -5.50925 | overlap 957476 CGTAGGAATTGTGAT GGAGTTGA GACT TTAACTCC TTTTTTGTGTTGGTT TERM 1458 957476 - 957515 + F 80 -6.6 -4.83615 | overlap 957463 ATGGAGTTGAGACTT TAACTCCTTTTTTGTGTT GGTT AACCAAGAAAAGGGGTTA TTTTTATGCAACATC LSA0968 957521 - 958123 + | integral membrane protein TERM 1459 958157 - 958140 - T 88 -4.8 -5.55695 | opp_overlap 958140, overlap 958133 958131 TAACAATACAAAAAA GAGGCC CTCAGC GACCTC TTTTTTTAATGGTCA TERM 1460 958140 - 958157 + T 77 -2.6 -5.55664 | opp_overlap 958133 958131 958140 TAACAATACAAAAAA GAGGCC CTCAGC GACCTC TTTTTTTAATGGTCA LSA0969 959959 - 958163 - | putative cadmium/zinc/cobalt-transporting P-type ATPase TERM 1461 959061 - 959074 + g 82 -6.7 -4.78752 | TCAAAAGCAGCTGAT TTGGC CAAC GCCAA TTTTTCAATTGTCGT TERM 1462 960067 - 960048 - R 100 -7.9 -5.82281 | opp_overlap 960048 AAAGACACAAAAAAA CCCATCA TATTAT TGATGGG TCTCATTTACAGAAA LSA0970 960410 - 960057 - | hypothetical protein TERM 1463 960451 - 960432 - R 100 -7.2 -5.7946 | opp_overlap 960430 960432 CTCCTAACAAAAAAA TAAAGCCC CGCA GGACTTTA TCTTCTTAATTGCTA ppa 961390 - 960467 - | putative manganese-dependent inorganic pyrophosphatase TERM 1464 960574 - 960561 - G 74 -6.7 -4.35518 | AAGGTCACATCAAAA GCCTT TTCG AAGGC TTCAGCTGGTTCGCC TERM 1465 960739 - 960751 + g 71 -3.3 -5.00884 | CAACTGTGTTAACTT GATCG ATA CGAAC TTTTTTACCAGCCAT LSA0972 962408 - 961443 - | LysR family transcriptional regulator TERM 1466 961537 - 961548 + g 71 -4.4 -4.87133 | overlap 961535 AAACTGTCAATCCGA GGAA TATC TTCC TTTTCTTTACGGAAT TERM 1467 962489 - 962469 - R 100 -2.5 -6.32976 | AAAAAAATAAAAAAA GAGCAAC CTTTTTC GTCGCCC TTTCTTATTATTCAC pflA 963347 - 962538 - | formate C-acetyltransferase activating enzyme (pyruvate formate-lyase activating enzyme) TERM 1468 963422 - 963372 - R 82 -10.6 -3.48115 | opp_overlap 963386 963387 963414 963416, overlap 963368 963387 963420 CTCTTATAAAAGACA CTCTTCCTAGCAAAACTGCTAAGT CTA AATTAGCAGCTTTACAAGAAAGCG GATAGGGTTAACTAT TERM 1469 963407 - 963387 - R 75 -6.9 -4.25104 | opp_overlap 963387 963386, overlap 963372 963368 CTCTTCCTAGCAAAA CTGCTAAGT CTA AATTAGCAG CTTTACAAGAAAGCG TERM 1470 963441 - 963420 - R 86 -10.2 -4.31433 | opp_overlap 963416 963414, overlap 963372 963368 CAGCTTTACAAGAAA GCGGATAG GGTTAA CTATCCGC TGCCTCATTTATTTT pflB 965726 - 963465 - | formate C-acetyltransferase (pyruvate formate-lyase) (formate acetyltransferase) TERM 1471 966007 - 965971 - R 100 -16.9 -3.31726 | opp_overlap 965971 965976, overlap 965976 TTCTTTTATATAACA GAAAAGGATGCTAATCA GCC TGATTAGCATCCTTTTG ATTAATCTTTATGAT TERM 1472 965971 - 966007 + r 100 -16.9 -2.70121 | opp_overlap 965971 965976, overlap 965976 TTCTTTTATATAACA GAAAAGGATGCTAATCA GCC TGATTAGCATCCTTTTG ATTAATCTTTATGAT TERM 1473 965976 - 966002 + r 100 -16.8 -4.50241 | opp_overlap 965976 965971, overlap 965971 TTATATAACAGAAAA GGATGCTAATCA GCC TGATTAGCATCC TTTTGATTAATCTTT TERM 1474 966002 - 965976 - R 100 -16.8 -4.76963 | opp_overlap 965971 965976, overlap 965971 TTATATAACAGAAAA GGATGCTAATCA GCC TGATTAGCATCC TTTTGATTAATCTTT parC 968474 - 966009 - | DNA topoisomerase IV subunit A TERM 1475 966923 - 966910 - G 72 -8.1 -3.7941 | opp_overlap 966910 GAGGCTTGATAAGAA CGGAG ACTA CTCCG TTTAAGGTAGCCGTC TERM 1476 966910 - 966923 + g 70 -8.1 -3.60296 | opp_overlap 966910 GAGGCTTGATAAGAA CGGAG ACTA CTCCG TTTAAGGTAGCCGTC TERM 1477 968433 - 968452 + g 91 -7.2 -5.38249 | overlap 968422 GTCGCCCATGACTTC TTCAAGGG TTAA CTCTTGAA TTTTTTGTGCTTCAT parE 970495 - 968504 - | DNA topoisomerase IV subunit B LSA0977 970697 - 971317 + | integral membrane protein TERM 1478 971332 - 971300 - T 80 -8.7 -3.88291 | gap 1, opp_overlap 971309, overlap 971309 TATTACCGTTATAAA CA-AAAAAAACGCC AATAAA GGCGTTTTTTTGTG CGATCATTTAAAGAT TERM 1479 971322 - 971309 - T 100 -5.2 -6.28967 | opp_overlap 971309, overlap 971300 TATAAACAAAAAAAA CGCC AATAAA GGCG TTTTTTTGTGCGATC TERM 1480 971309 - 971322 + T 88 -5.2 -5.626 | opp_overlap 971300 971309 TATAAACAAAAAAAA CGCC AATAAA GGCG TTTTTTTGTGCGATC LSA0978 972101 - 971340 - | ABC transporter permease/transmembrane protein LSA0979 972744 - 972085 - | ABC transporter ATP-binding protein TERM 1481 973554 - 973535 - g 70 -7.8 -3.71645 | AACCCTATATCGAAA CGACCCAT ATTA ATGGGACG GGTGATTCTCTCTCT LSA0980 972913 - 973710 + | hydroxymethylpyrimidine / phosphomethylpyrimidine kinase TERM 1482 973721 - 973751 + T 89 -12 -3.41527 | AATAAAAGCATTTTC CCTTATTAGTCGCT GCA AACGACTGATAAGG TTGTCCTAAAGCTTA TERM 1483 973845 - 973880 + T 89 -6.1 -5.30189 | opp_overlap 973847, overlap 973847 GCGATAAGAATAGCA AACCCGTCAAACGTT ACTTAA AACGTCTGCCGGGTC TTTTTTAGTGTTCTG TERM 1484 973878 - 973847 - T 89 -10.9 -4.02742 | opp_overlap 973845 973847 GATAAGAATAGCAAA CCCGTCAAACGTT ACTTAA AACGTCTGCCGGG TCTTTTTTAGTGTTC TERM 1485 973847 - 973878 + T 83 -8.7 -4.26398 | opp_overlap 973847, overlap 973845 GATAAGAATAGCAAA CCCGTCAAACGTT ACTTAA AACGTCTGCCGGG TCTTTTTTAGTGTTC aldB 974604 - 973885 - | acetolactate decarboxylase TERM 1486 974526 - 974516 - G 71 -6.8 -4.16016 | CCATGGGTTAATAAA TCGG CAA CCGA CAAAGTCCCGGTAAA als 976320 - 974638 - | acetolactate synthase TERM 1487 976074 - 976049 - G 76 -9.7 -3.24924 | opp_overlap 976049, overlap 976047 GTGGCAGTCACAACA CCTGTCGCTAG GTTG CTAGCACCAGG ACCAGATGTGGCCAT TERM 1488 976434 - 976414 - R 100 -11.9 -5.17353 | opp_overlap 976414 ATACCGAGCAAAAAA GCGCTTCTC TAC GAGAAACGC TTTATATTAACTATT TERM 1489 976414 - 976434 + r 86 -9.7 -4.23281 | opp_overlap 976414 ATACCGAGCAAAAAA GCGCTTCTC TAC GAGAAACGC TTTATATTAACTATT LSA0983 977323 - 976445 - | putative aldose-1 epimerase TERM 1490 976641 - 976656 + g 71 -3.2 -5.00616 | opp_overlap 976641, overlap 976643 CCTGATACTTTCAAA CTGATC GCAT GATCCG TTTTTTCAGAACGAA TERM 1491 977203 - 977185 - G 86 -8 -4.6971 | opp_overlap 977199, overlap 977186 CAAACGGGAATAAAA CGGGTGCG TGG CGCCCCCA AACTTTGGGATCTGC TERM 1492 977202 - 977186 - G 76 -9.3 -3.40741 | opp_overlap 977199, overlap 977185 AAACGGGAATAAAAC GGGTGCG TGG CGCCCCC AAACTTTGGGATCTG hslU 978773 - 977346 - | ATP-dependent protease ATP-binding subunit TERM 1493 978261 - 978273 + g 76 -7.7 -4.07885 | overlap 978242 978241 TTGGTTTAAACCAGC TGGTG TTT CACCA TTTTGAAGGGCCGTG TERM 1494 978673 - 978683 + g 71 -2.4 -5.24449 | CGATTATACAAGGCT ACCG CTA CGGC TTTTTTAGCTTTATC hslV 979322 - 978777 - | ATP-dependent protease peptidase subunit xerC2 980335 - 979424 - | site-specific DNA-tyrosine recombinase, XerC TERM 1495 980386 - 980341 - R 91 -6.3 -5.43866 | gap 1, opp_overlap 980341 CAAGCGCCAAAAAAA TCCCTCCAAGCTTG-GTTAA TAATACT TTACCACAAGCTTAGCGGGA TTTAAAAGGTGTTTA LSA0987 980963 - 980403 - | hypothetical protein LSA0988 981714 - 980941 - | hypothetical protein topA 983820 - 981736 - | DNA topoisomerase I TERM 1496 984029 - 984065 + r 88 -5.4 -5.43866 | gap 1, opp_overlap 984029 TAAACCACAAAAAAA CAAGGT-GTGATAAAAA ATAA TTTTTATCCTTACCTTG TTTTTTTAAGCGTTG TERM 1497 984065 - 984029 - R 84 -3.2 -5.75599 | gap 1, opp_overlap 984029 TAAACCACAAAAAAA CAAGGT-GTGATAAAAA ATAA TTTTTATCCTTACCTTG TTTTTTTAAGCGTTG LSA0990 984505 - 984071 - | hypothetical protein LSA0991 985400 - 984534 - | hypothetical protein TERM 1498 985429 - 985445 + r 81 -8.1 -4.24149 | CTTAGTGGTTTATTT GTTACTT TAT AAGTAAC TTGTTGTTTTAATAA LSA0992 986367 - 985501 - | DprA/SMF family DNA processing protein TERM 1499 986368 - 986416 + r 76 -4.8 -4.96848 | opp_overlap 986373, overlap 986373 ATTTTTAGTTAACAC AAAAACAGCTCCTTTACG TTAATTAATAATC CGTAAAAGAGCTGTTTTA TTTTTCTATAAAGCG TERM 1500 986373 - 986411 + r 84 -4.7 -5.38839 | opp_overlap 986373, overlap 986368 TAGTTAACACAAAAA CAGCTCCTTTACG TTAATTAATAATC CGTAAAAGAGCTG TTTTATTTTTCTATA TERM 1501 986411 - 986373 - R 90 -6.9 -5.10767 | opp_overlap 986373 986368 TAGTTAACACAAAAA CAGCTCCTTTACG TTAATTAATAATC CGTAAAAGAGCTG TTTTATTTTTCTATA rnhB 987183 - 986422 - | ribonuclease HII (RNase HII) LSA0994 988033 - 987185 - | putative GTP-binding protein TERM 1502 987788 - 987802 + g 70 -5.6 -4.27007 | overlap 987789 TGCATCAAGGGCAAT TGCGGT AAT GCCGCG TTTCTTGAATGTTTC TERM 1503 988137 - 988159 + r 78 -7.7 -4.23391 | opp_overlap 988137, overlap 988130 GGCTTAAATTAAAAA GGTTACGAC CCGCA GCCGTAACC TTTCTCGTTTATTTA TERM 1504 988159 - 988137 - R 100 -10.6 -4.98531 | opp_overlap 988137 988130 GGCTTAAATTAAAAA GGTTACGACC CGC AGCCGTAACC TTTCTCGTTTATTTA sipA2 988698 - 988168 - | Signal peptidase I (leader peptidase I) TERM 1505 988644 - 988618 - G 73 -5.8 -4.47707 | CGGCACCAAAAAGAA GGACCGGATG ACAAAAG CAACCAGTCC GGCCACGAGAATTGC LSA0996 988947 - 988723 - | hypothetical protein LSA0997 989587 - 988958 - | extracellular protein precursor LSA0998 990502 - 989600 - | putative extracellular lysophospholipase precursor TERM 1506 990150 - 990165 + g 80 -4.6 -5.1287 | TTCGCTTGTAGCGTT GGTTGC GTGC GCACCC TTTTTTCAATCTGAA LSA0999 991442 - 990582 - | hypothetical protein TERM 1507 991611 - 991581 - R 88 -4.8 -5.67063 | CCTAGCATAAAAAAA GATACCCTGC TTAATCGAATC ACAGGGTATC TTGAGGTGTTTTTAT dfrA 992123 - 991623 - | dihydrofolate reductase TERM 1508 991830 - 991814 - G 70 -3.7 -4.7657 | CAAAAAGTTTAAAAA TATCAGC ACC ACCGATA ATGAATAATTTTTGC thyA 993084 - 992134 - | thymidylate synthase TERM 1509 992386 - 992372 - G 77 -8.6 -3.97042 | TCATGAGCAATCAAA TGCGTT AAT AACGCA TAACTGGCGATGTTA TERM 1510 993237 - 993201 - R 77 -10.3 -2.90723 | overlap 993210 TTACGCTTAACCATA TTTGTCAAATCAGCGAT TGC ATCGCTAATCCGCCAAA TCCAGTTAATGCTCA TERM 1511 993228 - 993210 - R 72 -8.2 -3.56821 | overlap 993201 ACCATATTTGTCAAA TCAGCGAT TGC ATCGCTAA TCCGCCAAATCCAGT LSA1002 995169 - 993280 - | putative drug resistance ABC transporter, two ATP-binding subunits TERM 1512 995267 - 995248 - R 100 -8.6 -5.5943 | opp_overlap 995248 AAATCACTAAAAAAA CCGATTCA TAAT CGAATCGG TTTTAATGCAGTCAT TERM 1513 995248 - 995267 + r 78 -7.9 -4.2717 | opp_overlap 995248 AAATCACTAAAAAAA CCGATTC ATAATC GAATCGG TTTTAATGCAGTCAT LSA1003 995743 - 995282 - | hypothetical protein papS 997005 - 995812 - | polynucleotide adenyltransferase TERM 1514 997625 - 997639 + G 78 -2.2 -5.45802 | AAATGGGACGCTCCC TATTAA TTT TTGATA TTTTTGTTTTAACAG LSA1005 997153 - 998025 + | hypothetical protein TERM 1515 998039 - 998072 + T 100 -14.7 -3.78026 | opp_overlap 998044, overlap 998044 AAATAGCATAGACGA AAAAAGGCTGAGCAG ATAA CTGCTCGGCCTTTTA TATTTTAACTTTACC TERM 1516 998067 - 998044 - T 100 -12.4 -5.24989 | opp_overlap 998039 998044 GCATAGACGAAAAAA GGCTGAGCAG ATAA CTGCTCGGCC TTTTATATTTTAACT TERM 1517 998044 - 998067 + T 100 -14.6 -4.90471 | opp_overlap 998044, overlap 998039 GCATAGACGAAAAAA GGCTGAGCAG ATAA CTGCTCGGCC TTTTATATTTTAACT LSA1006 999114 - 998083 - | putative zinc-containing alcohol dehydrogenase (oxidoreductase) LSA1007 999306 - 999671 + | hypothetical protein TERM 1518 999726 - 999690 - T 100 -16.8 -5.35721 | opp_overlap 999691, overlap 999691 AGATAACAATAAAAA GGGACGATTCTTTCCA TACGT TGGAAAGAATCGTCCT TTTTTCACAATTAAC TERM 1519 999725 - 999691 - T 100 -20.3 -3.78992 | opp_overlap 999691, overlap 999690 GATAACAATAAAAAG GGACGATTCTTTCCA TACGT TGGAAAGAATCGTCC TTTTTTCACAATTAA TERM 1520 999691 - 999725 + T 100 -20.3 -5.055 | opp_overlap 999691 999690 GATAACAATAAAAAG GGACGATTCTTTCCA TACGT TGGAAAGAATCGTCC TTTTTTCACAATTAA LSA1008 1000377 - 999769 - | putative extracellular chitin-binding protein precursor TERM 1521 1000496 - 1000539 + r 86 -9.7 -4.03696 | opp_overlap 1000501 1000525 1000526, overlap 1000501 ACCGTTTGGACATCA AAAAAGACCCTTCAGTTAG ATAACA CTAACTGAAGGGTCTTCAA TTTATAGTAATTCTT TERM 1522 1000534 - 1000501 - R 100 -18.4 -5.21709 | opp_overlap 1000501 1000496, overlap 1000525 1000526 TTGGACATCAAAAAA GACCCTTCAGTTAG ATAACA CTAACTGAAGGGTC TTCAATTTATAGTAA TERM 1523 1000501 - 1000534 + r 100 -18.4 -3.34455 | opp_overlap 1000501 1000525 1000526, overlap 1000496 TTGGACATCAAAAAA GACCCTTCAGTTAG ATAACA CTAACTGAAGGGTC TTCAATTTATAGTAA LSA1009 1001233 - 1000541 - | putative drug:H(+) antiporter (C-terminal fragment), authentic frameshift LSA1010 1001628 - 1001242 - | putative drug:H(+) antiporter (N-terminal fragment), authentic frameshift LSA1011 1001756 - 1002007 + | hypothetical protein TERM 1524 1002039 - 1002011 - T 100 -14 -5.59962 | opp_overlap 1002011 CAAAACAAATAAAAA GACAGCTGTTGC AAAAA GCAACAACTGTC TTTTTATTCTTTGGT TERM 1525 1002011 - 1002039 + T 100 -11.8 -5.39905 | opp_overlap 1002011 CAAAACAAATAAAAA GACAGCTGTTGC AAAAA GCAACAACTGTC TTTTTATTCTTTGGT LSA1012 1003299 - 1002043 - | ABC transporter transmembrane protein LSA1013 1004148 - 1003420 - | ABC transporter ATP-binding protein TERM 1526 1003460 - 1003494 + g 76 -7.9 -4.08767 | gap 1, opp_overlap 1003449 1003462 TAGATTGCCTCAAGT GACGGTTCAGGCACAA TTTG TTGAACCTGA-CCGTC TTTTAACACAATCGC TERM 1527 1004267 - 1004242 - R 100 -11.2 -5.18561 | opp_overlap 1004241 1004242, overlap 1004231 TAAAGACGTAAAAAA CGCCCGACTA AAGTAA TAGTCGGACG CTTTCAATCATTATT LSA1014 1005543 - 1004278 - | hypothetical protein TERM 1528 1004371 - 1004384 + g 71 -6.7 -4.1552 | AGCCGCTAATAATTC TGGCA CTTG TGCCA TTTCTTGGAAGAATA TERM 1529 1004574 - 1004584 + g 79 -8.2 -4.08216 | opp_overlap 1004564 CAAAGGCCACGTTTT CCGC ATG GCGG TTTTGACGGCGATAA TERM 1530 1005169 - 1005159 - G 77 -8.2 -3.99324 | opp_overlap 1005159 1005158 GTTCATCAGGATAAA GGCG TAG CGCC GTTAATAGTTTCTGT TERM 1531 1005597 - 1005632 + r 76 -9.8 -3.04652 | gap 1, opp_overlap 1005604, overlap 1005596 1005604 ATGACTTTTAGCCAA TCA-AAAAGGGCTGGGA AAA TCCCAGCCCTCTCATGA ATTCTTATTTAACAG TERM 1532 1005604 - 1005624 + r 100 -16.9 -2.84619 | opp_overlap 1005604, overlap 1005597 1005596 TTAGCCAATCAAAAA GGGCTGGGA AAA TCCCAGCCC TCTCATGAATTCTTA TERM 1533 1005624 - 1005604 - R 100 -16.9 -4.88407 | opp_overlap 1005597 1005596 1005604 TTAGCCAATCAAAAA GGGCTGGGA AAA TCCCAGCCC TCTCATGAATTCTTA hbsU 1005912 - 1005637 - | histone-like DNA-binding protein HU TERM 1534 1005984 - 1005961 - R 85 -9.8 -3.84931 | TAATAAATACCGAAA TCATTTTTGA GTGG TCAAAAATGA CGAAACAATGAGTTG engA 1007429 - 1006119 - | GTP-binding protein EngA TERM 1535 1007555 - 1007519 - R 77 -8.2 -3.96534 | gap 1, overlap 1007514 1007528 CGCAAAATAACACAA GGACAAAAAGT-GCTTT AAGC AAAGCGACCCCTTGTCC CGCGATTAGTCTATT TERM 1536 1007623 - 1007588 - R 100 -18.5 -3.80573 | opp_overlap 1007588 GCGACTATCAGGAAA GGGTCTGGGACAAAA ACCTAG TTTCGTCCCAGACCC TACCTTAAGCCTATT TERM 1537 1007588 - 1007623 + r 100 -16.3 -2.53759 | opp_overlap 1007588 GCGACTATCAGGAAA GGGTCTGGGACAAAA ACCTAG TTTCGTCCCAGACCC TACCTTAAGCCTATT rpsA 1008874 - 1007663 - | 30S ribosomal protein S1 cmk 1009628 - 1008969 - | cytidylate kinase TERM 1538 1009129 - 1009154 + g 71 -8.3 -3.40622 | overlap 1009135 TCTGCTTGTAACGTT GCTAATGGGGT CATA ATCCCTTTAGC TGTATTTTCAGCATA TERM 1539 1009678 - 1009659 - R 86 -5.6 -5.25656 | opp_overlap 1009659 1009659, overlap 1009661 AAAATCATTAAAAAA GGCTGGGA GAAT CCCCAGGC CTTCTGTCTAGCATT LSA1019 1010396 - 1009695 - | cell surface protein precursor TERM 1540 1010082 - 1010094 + g 71 -4.8 -4.62872 | TTCTTGGCTTTCACT GGCT TCTTT AGCC TTTTTAGCAGTTGAT recQ1 1011910 - 1010465 - | ATP-dependent DNA helicase (RecQ) TERM 1541 1011592 - 1011581 - G 89 -7.2 -4.96501 | TGCCATAAAAATAAA GCGG TAAT CCGC TAAATGCGTCAGTAA LSA1021 1012935 - 1011907 - | hypothetical protein TERM 1542 1012539 - 1012495 - G 80 -10.2 -3.53811 | gap 1, opp_overlap 1012520 TTTATGCTGTTTAAA CCAACTGACAACTTGCACACG ATCA CGCATGCTAGTT-TCAATTGG AAAATAGTGTGTGTT LSA1022 1012972 - 1013202 + | ferredoxin TERM 1543 1013241 - 1013278 + T 100 -15.8 -3.81461 | opp_overlap 1013243 1013248, overlap 1013243 1013248 TTTTGTCGCTAAACT AATAAAAGCCTACCGC TATTTT GCGGTAGGCTTTTATA TTTAGATTGCTGTTT TERM 1544 1013243 - 1013276 + T 100 -18.4 -3.47928 | opp_overlap 1013243 1013248, overlap 1013241 1013248 TTGTCGCTAAACTAA TAAAAGCCTACCGC TATTTT GCGGTAGGCTTTTA TATTTAGATTGCTGT TERM 1545 1013276 - 1013243 - T 100 -18.4 -3.51232 | opp_overlap 1013243 1013241 1013248, overlap 1013248 TTGTCGCTAAACTAA TAAAAGCCTACCGC TATTTT GCGGTAGGCTTTTA TATTTAGATTGCTGT TERM 1546 1013248 - 1013271 + T 100 -13.9 -4.81359 | opp_overlap 1013248 1013243, overlap 1013243 1013241 GCTAAACTAATAAAA GCCTACCGC TATTTT GCGGTAGGC TTTTATATTTAGATT TERM 1547 1013271 - 1013248 - T 100 -13.9 -4.84642 | opp_overlap 1013243 1013241 1013248, overlap 1013243 GCTAAACTAATAAAA GCCTACCGC TATTTT GCGGTAGGC TTTTATATTTAGATT LSA1023 1013855 - 1013280 - | integral membrane protein TERM 1548 1013949 - 1013921 - R 100 -13.3 -4.66609 | opp_overlap 1013921 GATTGTACCTAAAAA GGCCTGCTAATCA GGG TGATTAACAGACC TTAGTTGAATACGTT TERM 1549 1013921 - 1013949 + r 73 -8.9 -3.38088 | opp_overlap 1013921 GATTGTACCTAAAAA GGCCTGCTAATCA GGG TGATTAACAGACC TTAGTTGAATACGTT rsuA1 1014940 - 1014170 - | pseudouridylate synthase, 16SrRNA-specific TERM 1550 1014735 - 1014758 + g 80 -2.5 -5.41746 | overlap 1014709 GAAATCACTTGGCGC GGTTTATAA AGGGCA TAATAAACC TTTTTTTCACGCGTT LSA1025 1015566 - 1014943 - | segregation and condensation protein B LSA1026 1016305 - 1015550 - | hypothetical protein LSA1027 1016682 - 1016314 - | hypothetical protein XerD 1017640 - 1016756 - | site-specific DNA tyrosine recombinase, XerD TERM 1551 1017335 - 1017316 - G 76 -7 -4.46212 | opp_overlap 1017317 1017318, overlap 1017318 CTTCTGATGATAAAA CAGCCGGC AGAT GCCGGCCT TGCTTCGGGGAATCA TERM 1552 1017318 - 1017333 + g 83 -11.8 -2.60194 | opp_overlap 1017316 1017318, overlap 1017317 TCTGATGATAAAACA GCCGGC AGAT GCCGGC CTTGCTTCGGGGAAT TERM 1553 1017333 - 1017318 - G 100 -11.8 -3.84183 | opp_overlap 1017318 1017317, overlap 1017316 TCTGATGATAAAACA GCCGGC AGAT GCCGGC CTTGCTTCGGGGAAT LSA1029 1018170 - 1017652 - | FUR family transcriptional regulator LSA1030 1019136 - 1018225 - | hypothetical protein LSA1031 1019630 - 1019157 - | integral membrane protein TERM 1554 1019737 - 1019767 + r 100 -14.2 -4.2461 | opp_overlap 1019742, overlap 1019742 GCGACTTGCGCACAA AAAAACACCCTCAA ATT TTGAGGGTGTTTTC TTTCTTAATCAGCGT TERM 1555 1019762 - 1019742 - R 100 -14.1 -5.60993 | opp_overlap 1019742 1019737 TTGCGCACAAAAAAA CACCCTCAA ATT TTGAGGGTG TTTTCTTTCTTAATC TERM 1556 1019742 - 1019762 + r 100 -14.1 -5.12172 | opp_overlap 1019742, overlap 1019737 TTGCGCACAAAAAAA CACCCTCAA ATT TTGAGGGTG TTTTCTTTCTTAATC pyk 1021547 - 1019787 - | pyruvate kinase TERM 1557 1020900 - 1020914 + g 73 -2.8 -5.22006 | overlap 1020902 CTTAGGGAAGATTTG AACATG TTC CATGTG TTTTTCTTCTAATAA pfk 1022589 - 1021630 - | 6-phosphofructokinase TERM 1558 1022121 - 1022137 + g 76 -10.9 -2.60244 | overlap 1022115 TTTCATGACTTGCAG CCGTATC GCG GATACGG TCAATTGATTCAAGA TERM 1559 1022662 - 1022692 + r 84 -7.8 -4.58283 | overlap 1022663 TAATATATTATCACT TTTCTGAAAAGA AGTCTTG TCTTTTCAGAAG TTTTTAACAAACTTA TERM 1560 1022663 - 1022691 + r 73 -9.1 -3.34488 | overlap 1022662 AATATATTATCACTT TTCTGAAAAGA AGTCTTG TCTTTTCAGAA GTTTTTAACAAACTT dnaE 1026054 - 1022722 - | DNA-directed DNA polymerase III, alpha subunit TERM 1561 1023735 - 1023749 + g 73 -2.9 -5.20534 | GCTTCTTTGCTTCCG CTAAA TACGT TTTAG TTTTTGTTCCTTGAT TERM 1562 1024664 - 1024683 + g 73 -8.6 -3.62775 | opp_overlap 1024664 ACGAGGTTCTTAAAA GCTTGCGA CTGA TCGTAAGC TTCTTGGAGCGTAAT TERM 1563 1025884 - 1025899 + g 78 -10.4 -3.31263 | opp_overlap 1025882, overlap 1025871 TAGCGGCTTAATATC GGCTGC TTTG GCAGCC TTATAAAAATCAACT TERM 1564 1026278 - 1026296 + G 70 -7.4 -3.77484 | opp_overlap 1026278 1026277, overlap 1026280 TAATGTTCAAGCAAC GTTGACTG TCT CAGTCATC TTTGGGATTTTACTC TERM 1565 1026280 - 1026294 + G 71 -8.6 -3.46106 | opp_overlap 1026278 1026277, overlap 1026278 ATGTTCAAGCAACGT TGACTG TCT CAGTCA TCTTTGGGATTTTAC LSA1035 1026177 - 1026353 + | putative small integral membrane protein TERM 1566 1026364 - 1026393 + T 100 -18.7 -5.77856 | opp_overlap 1026364 CATAAGAGTTAAAAA GGACGACCCAACG AAAA TGTTGGGTCGTCC TTTTTTTGCTTTATT TERM 1567 1026393 - 1026364 - T 100 -18 -4.76312 | opp_overlap 1026364 CATAAGAGTTAAAAA GGACGACCCAAC GAAAAT GTTGGGTCGTCC TTTTTTTGCTTTATT LSA1036 1027279 - 1026404 - | lipoprotein precursor TERM 1568 1027394 - 1027415 + r 79 -7.2 -4.40199 | opp_overlap 1027394 TCCGCCATCCAAAAA GGCCACCG CAGATC CGGTGACC TTTATTAATCTTTTT TERM 1569 1027415 - 1027394 - R 91 -9.4 -4.65895 | opp_overlap 1027394 TCCGCCATCCAAAAA GGCCACCG CAGATC CGGTGACC TTTATTAATCTTTTT LSA1037 1028961 - 1027429 - | putative amino acid/polyamine transport protein TERM 1570 1029108 - 1029118 + r 74 -2.6 -5.42198 | CTCTATTTCGTTTTC TAAT CTA ATTA TTTTGTTTTTTAACC LSA1038 1029713 - 1029159 - | hypothetical protein TERM 1571 1029809 - 1029790 - R 93 -6.4 -5.66684 | opp_overlap 1029790 1029792 TAAGGCATAAAAAAA GAGCTTCC CGAA GGAACCTC TTAACTAAGACTAGT rpmF 1030002 - 1029820 - | 50S ribosomal protein L32 TERM 1572 1030060 - 1030088 + r 74 -9.8 -2.71497 | opp_overlap 1030059 1030070 1030075, overlap 1030059 CCGAACTCAGGGAAC TTAGCAAGGATT AAATC AATCTTTGCTAA ATTGATTTAAAATCA TERM 1573 1030247 - 1030215 - R 100 -10.8 -5.18643 | opp_overlap 1030210 1030215 TCAATCAAAACAAAA TTCGAGATTGAAAC TCATC ATTTCAACCTCGAA TTCATGTTTAATCTT clpB 1032963 - 1030369 - | chaperone ClpB TERM 1574 1032662 - 1032652 - G 71 -4 -4.85599 | TTCAGTTGATAAAAA TTCA TCT TGAA ACTCTTGCATGTAAG TERM 1575 1033094 - 1033128 + r 73 -7.1 -4.0098 | opp_overlap 1033094 AAGTCTAATAAAAAA GAGGCACCCACCAAA ATAAA TTCGGTTAGTGCCTC TTATTTAAATTAAAC TERM 1576 1033128 - 1033094 - R 100 -11.5 -5.4756 | opp_overlap 1033094 AAGTCTAATAAAAAA GAGGCACCCACCAAA ATAAA TTCGGTTAGTGCCTC TTATTTAAATTAAAC LSA1041 1033536 - 1033138 - | hypothetical protein LSA1042 1034354 - 1033545 - | oxidoreductase rnz 1035298 - 1034360 - | ribonuclease Z (RNAse Z) LSA1044 1037261 - 1035333 - | putative acyltransferase TERM 1577 1036124 - 1036103 - G 75 -5.9 -4.62069 | overlap 1036104 TTGCCATCCCAAAAA CTAAACCGG ATTG CCGATTTAA CGTTGGGTGTTTAAC TERM 1578 1037386 - 1037360 - R 70 -3.1 -4.9792 | gap 1 GATGCTATAGAAAAA GGAAG-AATCCA GAGT CGAATTTCTTCC TTTTTGAACCCTATT obgE 1038692 - 1037400 - | GTPase ObgE TERM 1579 1038840 - 1038817 - R 88 -4.7 -5.63103 | gap 1 TTTTAAGTAAAAAAA GAAGACGCAT TAATC AT-CGTCTTC AGTATAACGCTTATT LSA1047 1039945 - 1038851 - | hypothetical protein fruR 1040145 - 1040897 + | fructose operon transcription regulator TERM 1580 1041050 - 1041066 + G 74 -6.5 -4.43501 | GCTGAATTAGCACTC CCTAGTG TTG CGCTGGG TTTTGTCGGTGGCTT TERM 1581 1041719 - 1041739 + G 73 -7.5 -4.10453 | opp_overlap 1041711, overlap 1041719 TTCAAAACAAGTCTT GCTTGTGGC AGT GCCACAGCC TTTTCAGAAGATTTA fruK 1040897 - 1041814 + | 1-phosphofructokinase (fructose-1-phosphate kinase) fruA 1041839 - 1043773 + | fructose-specific phosphotransferase system, enzyme IIABC TERM 1582 1043784 - 1043805 + T 100 -14.5 -5.29846 | opp_overlap 1043784 CTTAATTTAAAAAAA GTCGCAGTC AAAT GACTGCGAC TTTTTATTTGCCATT TERM 1583 1043805 - 1043784 - T 100 -14.5 -5.53288 | opp_overlap 1043784 CTTAATTTAAAAAAA GTCGCAGTC AAAT GACTGCGAC TTTTTATTTGCCATT uvrA2 1046360 - 1043835 - | excinuclease ABC subunit A TERM 1584 1044504 - 1044493 - G 78 -5.8 -4.8048 | opp_overlap 1044493 1044501 TTGTTATACGAAAAA TGGG CAAT CCCA TAATTGTGGGCTTGT LSA1052 1047254 - 1046415 - | hypothetical protein TERM 1585 1047373 - 1047350 - R 100 -11 -5.07107 | GAAACCGCCAAAAAA CGCCACAAGG ATTG CCCTGTGACG TTCACCAATCTTTAT LSA1053 1048413 - 1047385 - | putative cinnamoyl-CoA reductase (oxidoreductase) LSA1054 1048526 - 1049107 + | TetR family transcriptional regulator TERM 1586 1049102 - 1049135 + T 100 -13.3 -5.67967 | opp_overlap 1049102 AGCGGATTAAAAAAA CGTTAGGCTAGACAA TAAT TTGTCTGACCTAACG TTTTTTTATAGTGAT TERM 1587 1049135 - 1049102 - T 100 -13.3 -5.52986 | opp_overlap 1049102 AGCGGATTAAAAAAA CGTTAGGCTAGACAA TAAT TTGTCTGACCTAACG TTTTTTTATAGTGAT uvrC 1050919 - 1049141 - | excinuclease ABC subunit C TERM 1588 1049848 - 1049864 + g 70 -3.7 -4.81212 | TCTTGCGATTATCGA GTTCC AATAAGC GGAAC TTTTCTTCTAATACC TERM 1589 1050879 - 1050864 - G 80 -9 -4.00042 | TCTTTCATCAAATAA CAGCCT GGTA AGGCTG GTAATAAGGCTAATT LSA1056 1051730 - 1050999 - | amino acid ABC transporter ATP-binding protein LSA1057 1053186 - 1051723 - | amino acid ABC transporter permease/substrate-binding protein LSA1058 1053321 - 1053473 + | hypothetical protein TERM 1590 1053481 - 1053513 + T 100 -20.8 -5.1675 | opp_overlap 1053481 AAGAATAATCAAAAA GAGGTGCGGACAAA ATTAC TTTGTCCGCACCTC TTTTTTAATACCTGA TERM 1591 1053513 - 1053481 - T 100 -21.5 -5.03201 | opp_overlap 1053481 AAGAATAATCAAAAA GAGGTGCGGACAAAA TTA CTTTGTCCGCACCTC TTTTTTAATACCTGA LSA1059 1053841 - 1053548 - | putative nucleoside pyrophosphatase LSA1060 1054440 - 1053841 - | GTPase EngB TERM 1592 1054577 - 1054550 - R 100 -9.8 -5.47218 | opp_overlap 1054550 CCTTATGTAAAAAAA GTTGCCGGGTCG ATTA CACCCCGACAAC TTCATAGTCATTATG clpX 1055841 - 1054588 - | ATP-dependent protease ATP-binding subunit TERM 1593 1056015 - 1055986 - R 100 -17.3 -4.34267 | opp_overlap 1055986 CCATATAACGCAAAA GCGGGTTCAAAGT AGTC ACCTTGAACCCGC TTTTAGAACCGATTA TERM 1594 1055986 - 1056015 + r 100 -15.1 -4.08692 | opp_overlap 1055986 CCATATAACGCAAAA GCGGGTTCAAAGT AGTC ACCTTGAACCCGC TTTTAGAACCGATTA tig 1057346 - 1056051 - | trigger factor TERM 1595 1057530 - 1057509 - R 86 -4.4 -5.64274 | TTATGTATAAAAAAA CTCGCAGC TTTTAC ACTACGAG TTTTTCCAATTCAAC tuf 1058747 - 1057557 - | elongation factor Tu TERM 1596 1057817 - 1057830 + g 78 -5.3 -4.94992 | opp_overlap 1057817 TGCTCAAGATATAAA CTTCA CCCT TGAAG TTTTTGTGAGTTTGG LSA1064 1059917 - 1058970 - | hypothetical protein TERM 1597 1059983 - 1059953 - R 71 -4.8 -4.61284 | gap 1, opp_overlap 1059954, overlap 1059954 AACACTAAATTAAAA GGGCCCCGATAAA TAATCC TTTATCCG-GCCC TTTTTTAAGTGTCAT TERM 1598 1059954 - 1059983 + r 79 -5 -5.13473 | opp_overlap 1059953 1059954 ACACTAAATTAAAAG GGCCCCGATAAA TAATCC TTTATCCGGCCC TTTTTTAAGTGTCAT LSA1065 1061724 - 1060006 - | metallo-beta-lactamase family hydrolase TERM 1599 1060785 - 1060801 + g 76 -8 -4.10453 | TATGGATTAAGCGGT GATGGC TTGTT GCCATC TTTTGGAGCGCTTTG TERM 1600 1061938 - 1061914 - R 100 -10.8 -5.63504 | opp_overlap 1061914 AAGCGCACAAAAAAA GCAAACAGCC AAAAA GACTGTTTGC TTTTAAAGGTTGAAT TERM 1601 1061914 - 1061938 + r 81 -8.6 -4.1466 | opp_overlap 1061914 AAGCGCACAAAAAAA GCAAACAGCC AAAAA GACTGTTTGC TTTTAAAGGTTGAAT rpsO 1062222 - 1061953 - | 30S ribosomal protein S15 TERM 1602 1062304 - 1062318 + H 71 -8.6 -3.24202 | overlap 1062302 1062300 CAGAGTAACGGGTTT GTGCTT TTA AAGCAC TGTCTTAGTTTACTA rpsT 1062501 - 1062755 + | 30S ribosomal protein S20 TERM 1603 1062774 - 1062811 + T 100 -19.3 -5.9362 | opp_overlap 1062768 1062766 1062776 TAACCAATATTTTAA TAGGCCCGACTAAGACG TTTT CGTTTTAGCCGGGCCTA TTTTTTTGTGTTTTA TERM 1604 1062809 - 1062776 - T 100 -17.5 -3.10028 | opp_overlap 1062774, overlap 1062768 1062766 ACCAATATTTTAATA GGCCCGACTAAGACG TTTT CGTTTTAGCCGGGCC TATTTTTTTGTGTTT holA 1063852 - 1062824 - | DNA polymerase III subunit delta TERM 1605 1063660 - 1063644 - G 84 -3.5 -5.52384 | overlap 1063646 CGCTCACCAAAAAAA GGGGCCG ATT CGGCATC ATCCAAAGCATTCGC LSA1069 1066116 - 1063849 - | putative type II secretion/competence system, protein ComEC-like TERM 1606 1065263 - 1065252 - G 75 -7.2 -4.31397 | overlap 1065253 ACCGGGATAAAATAA GCGC AATC GCGC GACTAATGCTTGTCG TERM 1607 1066089 - 1066108 + g 85 -7.2 -4.88407 | opp_overlap 1066089 1066092 AACTGATTAAACAAA TAACTGGA TAAA TCCAGTTG TTTTTCATTCAGTCG TERM 1608 1066105 - 1066092 - G 74 -6.7 -4.35958 | opp_overlap 1066089, overlap 1066089 TGATTAAACAAATAA CTGGA TAAA TCCAG TTGTTTTTCATTCAG LSA1070 1066601 - 1066113 - | putative type II secretion/competence system, dCMP deaminase ComEB-like LSA1071 1067363 - 1066659 - | putative type II secretion/competence system, protein ComEA-like TERM 1609 1067443 - 1067399 - R 77 -10.4 -2.75819 | gap 1, opp_overlap 1067408, overlap 1067408 TATATACCCTTAAAG CA-CAAAAAAGTTTGCCGA TTTTATCT TCGGCAAACTTTTTTAATG GTTTTTCAAATAAGT TERM 1610 1067433 - 1067408 - R 100 -9.1 -5.42265 | opp_overlap 1067408, overlap 1067399 TTAAAGCACAAAAAA GTTTGCCGA TTTTATCT TCGGCAAAC TTTTTTAATGGTTTT TERM 1611 1067408 - 1067433 + r 100 -9.1 -5.25656 | opp_overlap 1067408 1067399 TTAAAGCACAAAAAA GTTTGCCGA TTTTATCT TCGGCAAAC TTTTTTAATGGTTTT LSA1072 1068484 - 1067438 - | lipoprotein precursor kdtB 1068983 - 1068486 - | phosphopantetheine adenylyltransferase (pantetheine-phosphate adenylyltransferase) LSA1074 1069550 - 1068996 - | putative adenine-specific DNA methyltransferase TERM 1612 1069368 - 1069351 - G 76 -7.7 -4.10437 | CGATCAATTAAATAA GCATGGT CCAT ACCACGC GAAACAGCCTCAATC LSA1075 1069845 - 1069555 - | hypothetical protein LSA1076 1070957 - 1069869 - | extracellular protein precursor ftsW 1072155 - 1070968 - | integral membrane cell division protein, FtsW LSA1078 1072460 - 1072164 - | hypothetical protein TERM 1613 1072533 - 1072558 + r 100 -12 -4.41797 | opp_overlap 1072533 CTGACACTAAAAAAA GGTAGCCTAA AGTGTC TTAGGCTACC TTTTAATATAGTTTT TERM 1614 1072558 - 1072533 - R 100 -12.7 -5.58454 | opp_overlap 1072533 CTGACACTAAAAAAA GGTAGCCTAAA GTGT CTTAGGCTACC TTTTAATATAGTTTT LSA1079 1074416 - 1072581 - | GTP-binding protein TypA (stress response GTPase) TERM 1615 1072961 - 1072971 + g 82 -6.8 -4.7497 | CACCGTTACGACGGC CTGG TTC CCAG TTTTTAATCACTGGC LSA1080 1075359 - 1074562 - | myo-inositol monophosphatase LSA1081 1075660 - 1075376 - | hypothetical protein TERM 1616 1075796 - 1075772 - R 76 -4.9 -4.98522 | AAGTGTATACAAAAA GGGCCGTCACA ATT CATGACGAACC CTTCAGTGTTAGATG pdhD 1077211 - 1075805 - | dihydrolipoamide dehydrogenase pdhC 1078841 - 1077219 - | dihydrolipoamide acetyltransferase pdhB 1079869 - 1078871 - | pyruvate dehydrogenase complex, E1 component, beta subunit pdhA 1080959 - 1079850 - | pyruvate dehydrogenase complex, E1 component, alpha subunit TERM 1617 1080397 - 1080371 - G 74 -9.4 -3.34089 | opp_overlap 1080370 1080369, overlap 1080369 TTTGAACAACGAAGA TTGCAGGGGCTT TAA AAGCACCAGCAA AGTTAATGCCTTCAT TERM 1618 1081255 - 1081223 - R 100 -8.6 -5.66684 | gap 1, opp_overlap 1081223 CAATGCACAAAAAAA GCGCT-AGTACAAAC CATC GTCTGTACTAAACGC TTGTTAATTATATTT LSA1086 1081965 - 1081282 - | hypothetical protein TERM 1619 1082175 - 1082155 - H 100 -9.7 -5.61596 | AGTTGTACAAAAAAA GACGCACAA CAA TTGAGCGTC ATCCATAACATCATG TERM 1620 1082391 - 1082402 + H 73 -5.8 -4.36372 | CTGGTTATCAATAGG TGGG TCAA CCCA TTTGTTCCGTTTTTT def 1082468 - 1083025 + | peptide deformylase TERM 1621 1083067 - 1083042 - T 100 -13.4 -5.32565 | opp_overlap 1083042 GAACTAACGAAAAAA GGTTAAGCCC CAAATT GGGCTTAACC TTTTTTCTATGCATT TERM 1622 1083042 - 1083067 + T 100 -13.4 -5.38951 | opp_overlap 1083042 GAACTAACGAAAAAA GGTTAAGCCC CAAATT GGGCTTAACC TTTTTTCTATGCATT LSA1088 1084822 - 1083074 - | putative multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits LSA1089 1086563 - 1084824 - | putative multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits LSA1090 1087076 - 1086591 - | hypothetical protein LSA1091 1087273 - 1087485 + | hypothetical protein LSA1092 1087490 - 1089178 + | metallo-beta-lactamase family hydrolase TERM 1623 1089222 - 1089183 - f 78 -10.8 -2.67129 | opp_overlap 1089188, overlap 1089176 1089182 1089181 GTAATGAATAAAACC TTTAAGGGCGATACAAAC TCAC GTTTGTATCGCCCTTTTT TTTAATTCTTATCAA TERM 1624 1089188 - 1089217 + F 100 -19.5 -6.00814 | opp_overlap 1089183 1089182 1089181 GAATAAAACCTTTAA GGGCGATACAAAC TCAC GTTTGTATCGCCC TTTTTTTTAATTCTT LSA1093 1089312 - 1090277 + | hypothetical protein TERM 1625 1090294 - 1090323 + T 100 -10.9 -5.49234 | opp_overlap 1090294 1090297 CTTTTACAAATTAAA GAAGAACAACG CCATTTAA CGTTGTTCTTC TTTTTTATTACCTAT TERM 1626 1090323 - 1090294 - T 93 -12.3 -4.13995 | opp_overlap 1090294, overlap 1090297 CTTTTACAAATTAAA GAAGAACAACGCC ATTT AACGTTGTTCTTC TTTTTTATTACCTAT TERM 1627 1090320 - 1090297 - T 81 -8.2 -4.18676 | opp_overlap 1090294, overlap 1090294 TTACAAATTAAAGAA GAACAACGCC ATTT AACGTTGTTC TTCTTTTTTATTACC LSA1094 1090815 - 1090309 - | integral membrane protein TERM 1628 1090602 - 1090589 - G 78 -2.3 -5.4477 | overlap 1090590 AAAGCGCCAAAAAAA GCCCC CGTT AAGGC TAAAGGTGGAATCCC LSA1095 1091491 - 1090808 - | TENA/THI-4 family transcriptional activator TERM 1629 1091581 - 1091555 - R 100 -14.6 -4.21908 | TACGAGCACTCAAAA TACCCGCCAATT AAA AATTGACGGGTA CCAAAATAAGCACGT LSA1096 1092219 - 1092061 - | hypothetical protein LSA1097 1092843 - 1092343 - | ADP-ribose phosphorylase TERM 1630 1092720 - 1092738 + g 71 -3 -5.06816 | overlap 1092722 GACATTGATCGTTGA CCGCCC GATAAAG GGGCCG TTTTTGTTGGGCCAT folP 1093925 - 1092840 - | dihydropteroate synthase folC2 1095243 - 1093936 - | folylpolyglutamate synthase folE 1095824 - 1095255 - | GTP cyclohydrolase I folK 1096326 - 1095796 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folB 1096673 - 1096323 - | dihydroneopterin aldolase TERM 1631 1096919 - 1096891 - H 100 -10.4 -5.7946 | opp_overlap 1096891, overlap 1096893 TCCCCAATAAAAAAA TACTGCCTAACC GAAAG GGTTAAGCAGCA TTCATATTTTTAAAA TERM 1632 1096917 - 1096893 - H 95 -10.8 -4.54306 | opp_overlap 1096891, overlap 1096891 CCCAATAAAAAAATA CTGCCTAACC GAAAG GGTTAAGCAG CATTCATATTTTTAA LSA1103 1097022 - 1097450 + | GNAT family N-acetyltransferase TERM 1633 1097499 - 1097467 - T 100 -20.1 -4.3739 | opp_overlap 1097467 TAGCTTTCTACAAAA GAGGACACACTATCC ATT AGATAGTGTGTCCTC TTTTAATTAGACCAT TERM 1634 1097467 - 1097499 + T 100 -19.4 -4.41047 | opp_overlap 1097467 TAGCTTTCTACAAAA GAGGACACACTATC CATTA GATAGTGTGTCCTC TTTTAATTAGACCAT LSA1104 1097793 - 1097506 - | hypothetical protein LSA1105 1097978 - 1098184 + | integral membrane protein TERM 1635 1098188 - 1098224 + F 80 -11.8 -2.55069 | gap 1, opp_overlap 1098188 1098198, overlap 1098198 ATGGCACGTTAATAA CC-TGAAAAAAGCCCTC ACTT GAGGGCTTTTTTGATGG CTATATTTAAAAGTT TERM 1636 1098223 - 1098188 - f 93 -12 -3.65224 | opp_overlap 1098188 1098198, overlap 1098198 ATGGCACGTTAATAA CCTGAAAAAAGCCCTC ACTT GAGGGCTTTTTTGATG GCTATATTTAAAAGT TERM 1637 1098198 - 1098213 + F 100 -10.4 -5.17353 | opp_overlap 1098198 1098188, overlap 1098188 AATAACCTGAAAAAA GCCCTC ACTT GAGGGC TTTTTTGATGGCTAT TERM 1638 1098213 - 1098198 - f 100 -10.4 -5.11937 | opp_overlap 1098188 1098198, overlap 1098188 AATAACCTGAAAAAA GCCCTC ACTT GAGGGC TTTTTTGATGGCTAT LSA1107 1098481 - 1098639 + | hypothetical protein TERM 1639 1098691 - 1098657 - f 91 -10.2 -4.55023 | opp_overlap 1098656 1098661, overlap 1098661 TGTAACAGTAGAAAA TAAACTATTGTGGCAG TGC CTTTCACAATAGTTTA CTGATATAATTAAAT TERM 1640 1098687 - 1098661 - f 80 -6.6 -4.81357 | opp_overlap 1098661 1098656, overlap 1098657 ACAGTAGAAAATAAA CTATTGTGGCAG TGC CTTTCACAATAG TTTACTGATATAATT TERM 1641 1098661 - 1098687 + F 80 -8.8 -3.83066 | opp_overlap 1098657 1098661, overlap 1098656 ACAGTAGAAAATAAA CTATTGTGGCAG TGC CTTTCACAATAG TTTACTGATATAATT TERM 1642 1099845 - 1099863 + G 70 -7.4 -3.88823 | opp_overlap 1099844, overlap 1099835 ACGAGTGTATGAACT TGGTTCAG CAT CTGTACCA TTTAAATTTGATGTT LSA1108 1098748 - 1100109 + | putative chromosome segregation ATPase TERM 1643 1100121 - 1100154 + T 100 -9 -5.24129 | gap 1, opp_overlap 1100121 ATAAAACTAAAAAAA GGCTATAAC-CCTTG ATATA CAAGGAGTTACAGCC TTTTTTCTACCCCAC TERM 1644 1100154 - 1100121 - T 100 -11.2 -5.81622 | gap 1, opp_overlap 1100121 ATAAAACTAAAAAAA GGCTATAAC-CCTTG ATATA CAAGGAGTTACAGCC TTTTTTCTACCCCAC LSA1109 1101564 - 1100161 - | iron/sulfur ABC transporter TERM 1645 1100508 - 1100546 + g 93 -12.6 -3.08798 | opp_overlap 1100499 1100520, overlap 1100499 1100520 AATCAACTGCGCCGC CGTCTTTAGCAATCGATT TTG AAACGATTGATGAAGACG TATTCGGTGCGGCAT LSA1110 1102052 - 1101564 - | putative NifU-homolog involved in Fe-S cluster assembly LSA1111 1103277 - 1102039 - | putative cysteine desulfurase TERM 1646 1102159 - 1102173 + g 76 -10 -3.30441 | TGCCGCAACGTTTAG CCACTG CAT CAGTGG TTGTGCGCAATGATG TERM 1647 1102623 - 1102599 - G 79 -10.9 -3.01712 | CTGTTGGCCCCAACA TTTTATGCCCT GAA AAGGCATAAAA ATCTGCATCGAGCGC LSA1112 1104559 - 1103255 - | iron/sulfur ABC transporter TERM 1648 1103299 - 1103321 + g 78 -5.6 -4.84017 | ACTTCCTCTCGATCG TGTCCGTTAA TTG TTGACGAACA TTTTTGTCCGGAATT LSA1113 1105354 - 1104572 - | ABC transporter TERM 1649 1105513 - 1105494 - R 88 -5 -5.46657 | TATGTTAATAAAAAA GCCCTATC CTTC GATAAGAC TTTTCCTTCATTATT LSA1114 1106339 - 1105524 - | methionine ABC transporter substrate-binding protein LSA1115 1107048 - 1106359 - | methionine ABC transporter transmembrane protein LSA1116 1108075 - 1107041 - | methionine ABC transporter ATP-binding protein TERM 1650 1108039 - 1108057 + g 73 -8.2 -3.63655 | ATGTCTGTTGTTCCC GTTGGTAA ACC TTACCGAC TTGCTTTAGTTCTAA TERM 1651 1108144 - 1108113 - R 100 -11.7 -5.68039 | AAATGTACAAAAAAA GTCCTCCCTCTCA AATAAA TGAGAGAAAGGAC GCCAATTTGCGTGTT LSA1117 1108735 - 1108427 - | aminomethyltransferase family glycine cleavage protein H TERM 1652 1108660 - 1108701 + g 100 -10.2 -4.38927 | overlap 1108661 AGCCAAATTCATTTT GCGCAGCTCTAGTCAGAC CAATTC GTCTGATTGAAGCTGCGA TTTCTTCTGTCCAAA TERM 1653 1108661 - 1108700 + g 100 -13.7 -3.22874 | overlap 1108660 GCCAAATTCATTTTG CGCAGCTCTAGTCAGAC CAATTC GTCTGATTGAAGCTGCG ATTTCTTCTGTCCAA LSA1118 1109953 - 1108754 - | rod-shape determining protein TERM 1654 1110025 - 1109989 - R 81 -11.7 -2.7186 | opp_overlap 1109997, overlap 1109994 AAACTGTCTTAATTA TAAAATAACCCGGCCAA AAA TCTGCCGGGTTACTCTA AAGCTAATTAATTCT TERM 1655 1110020 - 1109994 - R 95 -11.6 -4.5442 | opp_overlap 1109997, overlap 1109989 GTCTTAATTATAAAA TAACCCGGCCAA AAA TCTGCCGGGTTA CTCTAAAGCTAATTA LSA1119 1110277 - 1110047 - | hypothetical protein LSA1120 1110555 - 1110307 - | hypothetical protein LSA1121 1110759 - 1110577 - | extracellular peptide precursor mbl 1111775 - 1110786 - | cell shape determining protein MreB TERM 1656 1111887 - 1111877 - R 79 -3.2 -5.56673 | ATTTACAATAAAAAA GAAC GAC GTCC GTCTAAAAACGAATA murA1 1113225 - 1111924 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1657 1111982 - 1111970 - G 79 -7.7 -4.26076 | opp_overlap 1111970 CCAGCTTCATCAAAA TCAGC ACG GCTGA TATGTGCACCTAATG LSA1124 1113486 - 1113253 - | hypothetical protein TERM 1658 1113634 - 1113609 - R 100 -14.7 -5.64304 | opp_overlap 1113609 TAACACAACAAAAAA GCCCCCACGAC TTTT GCCGTGGAGGC TTCTTGCAATAACTA TERM 1659 1113609 - 1113634 + r 86 -10.3 -3.65522 | opp_overlap 1113609 TAACACAACAAAAAA GCCCCCACGAC TTTT GCCGTGGAGGC TTCTTGCAATAACTA atpC 1114084 - 1113647 - | F0F1 ATP synthase subunit epsilon atpD 1115548 - 1114097 - | F0F1 ATP synthase subunit beta atpG 1116498 - 1115551 - | H(+)-transporting two-sector ATPase (ATP synthase), gamma subunit atpA 1118046 - 1116511 - | F0F1 ATP synthase subunit alpha TERM 1660 1116569 - 1116557 - G 79 -7.7 -4.36914 | opp_overlap 1116557 1116556 TGTTCTGGTACAAAA CCTTC TGT GAAGG CTTTAATAGCAGCAT atpH 1118616 - 1118074 - | F0F1 ATP synthase subunit delta atpF 1119124 - 1118603 - | H(+)-transporting two-sector ATPase (ATP synthase), B subunit TERM 1661 1118813 - 1118836 + g 78 -7.4 -4.42235 | overlap 1118811 1118814 TTGGACTTCTTCTTG AGCGAGGGTA ACCA TACCTTCGCG TTGTTTTTCACCGTT TERM 1662 1118814 - 1118835 + g 81 -10.9 -3.24256 | overlap 1118813 1118811 TGGACTTCTTCTTGA GCGAGGGTA ACCA TACCTTCGC GTTGTTTTTCACCGT atpE 1119399 - 1119187 - | H(+)-transporting two-sector ATPase (ATP synthase), C subunit atpB 1120131 - 1119418 - | F0F1 ATP synthase subunit A TERM 1663 1120311 - 1120323 + r 79 -3.5 -5.4833 | opp_overlap 1120295 1120293, overlap 1120293 AAAGTAATTAGTGAT TAATT TGT AATTA TTTTTTGTTGAGTCG TERM 1664 1120418 - 1120396 - R 93 -7.6 -5.14563 | TTGGGTATCAAAAAA GCGTCCGCCA AAT CGCCGAACGC CTCCTATTATAAGTC upp 1121069 - 1120440 - | Uracil phosphoribosyltransferase (UMP pyrophosphorylase) TERM 1665 1121156 - 1121122 - R 100 -7.9 -5.4756 | AATTTCAACAAAAAA GAGTGACTCCAAAGA AAACA TCCTCTGAGCCACTC TCCTTTCCGCTTAAA glyA 1122474 - 1121227 - | glycine/Serine hydroxymethyltransferase LSA1135 1123588 - 1122560 - | Sua5 family translation factor LSA1136 1124487 - 1123618 - | putative protoporphyrinogen oxidase, HemK TERM 1666 1124463 - 1124450 - G 100 -5.2 -5.93252 | opp_overlap 1124450 TCTAAAAATAAAAAA GCCC AATTCA GGGC TTTAAGATAAGTGAG prfA 1125562 - 1124465 - | peptide chain release factor 1 tdk 1126162 - 1125569 - | thymidine kinase TERM 1667 1126676 - 1126655 - g 75 -5.3 -4.77925 | gap 1 AAAAAAGGTCAAAAA CAACTTGCAA TTC TTG-AAGTTG ACGAAGCCAACGTCG TERM 1668 1126937 - 1126923 - g 73 -8.6 -3.60006 | overlap 1126915 AACCAGATGGCGAAA TGCTTG CAC CAAGCA ATACGGATGGCGTTT TERM 1669 1127660 - 1127649 - g 90 -5.8 -5.49729 | AATTACGTAAAAAAA TGGC AGAG GCCA ACTACATTAAGAAAG LSA1139 1126340 - 1127689 + | putative UDP-N-acetylmuramyl peptide synthetase TERM 1670 1127933 - 1127920 - g 82 -4.5 -5.27779 | CTTAACAGTAAAAAA GCTGC CCTC ACAGC ATACATCGAAAATGG LSA1140 1127686 - 1128429 + | putative glutamine amidotransferase TERM 1671 1128442 - 1128479 + T 100 -11.4 -5.2696 | opp_overlap 1128442 1128445 TAAGTACTCCCAAAA GAACCCCGACAATATC TTTTTC GATATTGCAGGGGTTC TTTTTTACATTTTAA TERM 1672 1128479 - 1128442 - T 100 -13.6 -4.12902 | opp_overlap 1128442, overlap 1128445 TAAGTACTCCCAAAA GAACCCCGACAATATC TTTTTC GATATTGCAGGGGTTC TTTTTTACATTTTAA TERM 1673 1128476 - 1128445 - T 86 -9.5 -4.18506 | opp_overlap 1128442, overlap 1128442 GTACTCCCAAAAGAA CCCCGACAATATC TTTTTC GATATTGCAGGGG TTCTTTTTTACATTT ppdK 1131112 - 1128491 - | pyruvate phosphate dikinase LSA1142 1131285 - 1131908 + | hypothetical protein LSA1143 1131928 - 1132725 + | hypothetical protein TERM 1674 1132734 - 1132715 - f 81 -9.4 -3.76125 | CTAGTTTAATCCAAA CCTTAATC TAAA GATTAAGG AAACGACTTAACCTT LSA1144 1132847 - 1133092 + | hypothetical protein TERM 1675 1133100 - 1133133 + T 100 -11.1 -5.43514 | opp_overlap 1133100 TAAATTAACTAAAAA GAACGTTGACCAGAA GTAA TTCTAGCCAACGTTC TTTTTTAGTTATTTT TERM 1676 1133133 - 1133100 - T 100 -15.5 -4.95957 | opp_overlap 1133100 TAAATTAACTAAAAA GAACGTTGACCAGAA GTAA TTCTAGCCAACGTTC TTTTTTAGTTATTTT LSA1145 1133786 - 1133142 - | putative metal-dependent phosphohydrolase TERM 1677 1133821 - 1133844 + r 78 -9.6 -3.60939 | opp_overlap 1133821, overlap 1133817 TAATCATTAAAAAAA TTGCAACCAC GGCT GCGGTTGCAA TTCGTTATGTTTATT TERM 1678 1133844 - 1133821 - R 100 -11.8 -5.58074 | opp_overlap 1133817 1133821 TAATCATTAAAAAAA TTGCAACCAC GGCT GCGGTTGCAA TTCGTTATGTTTATT manA 1134834 - 1133860 - | mannose-6-phosphate isomerase TERM 1679 1134775 - 1134791 + g 87 -5.1 -5.4505 | GAAGGCTTCTGCTAA TTTGCGG CCA CCCCAAA TTTTTTCTTGGAAAA LSA1147 1135946 - 1134936 - | hypothetical protein TERM 1680 1136026 - 1135999 - R 100 -8.5 -5.47218 | opp_overlap 1135999 CGCCATCTAAAAAAA GACACCACCAG TTTAAC CTGATGATGTC CTTTATTTAAAACCA LSA1148 1137921 - 1136044 - | putative multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits TERM 1681 1137160 - 1137148 - G 70 -7.7 -3.72576 | TTGTTCCCGATTAAA GGTCT TCA AGACC ACTTGACCGGAAAAG LSA1149 1139651 - 1137921 - | putative multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunit LSA1150 1140316 - 1139675 - | TetR family transcriptional regulator TERM 1682 1140279 - 1140303 + g 84 -3.5 -5.42259 | overlap 1140280 AATAACCGTTGCTGT TTTTCTGCCGG CAA CCGGAAAAAAG TTTTTTTAGGCATGC TERM 1683 1140343 - 1140375 + H 79 -8.5 -4.13304 | opp_overlap 1140343 CCTTCCAACTAAAAA TGACATACCGTCGTA AAA TATGACGTTCTGTCA TTTTAGCACTGATTT TERM 1684 1140375 - 1140343 - H 78 -6.3 -4.8622 | opp_overlap 1140343 CCTTCCAACTAAAAA TGACATACCGTCGTA AAA TATGACGTTCTGTCA TTTTAGCACTGATTT TERM 1685 1140982 - 1140970 - g 76 -7.7 -4.08767 | opp_overlap 1140969 1140965 CGCACTCGCCGAAAA GGCAA CCC TTGCC GATTCATTCTGGTGG LSA1151 1140521 - 1141249 + | potassium/ion channel protein tnpA3-ISLsa1 1142191 - 1141271 - | IS30 family transposase TERM 1686 1141992 - 1141962 - G 74 -7.7 -3.91084 | gap 1 TGATTGGTAATTAAA GTCGCT-AATGCTG CCGT CAGCATCGAACGAC GACCGCAATTCCGCC TERM 1687 1142086 - 1142109 + g 100 -13.2 -3.40639 | gap 1 AGCTAATCGTAGCTT TGGC-GACGCC TAA GGCGTCAGCCA TTACTTGGTAAGATT TERM 1688 1142329 - 1142339 + r 76 -6.8 -4.52101 | TAATCACCAGATAGC GGCT TTA AGCC TTTTAATTAGTTATT TERM 1689 1142397 - 1142431 + r 100 -10.2 -5.0925 | opp_overlap 1142397 TAAACAACTAAAAAA GGTTGGCTAAACAA GAAATAA TTGTTTAACCAACC TTTTTAATTTTGAGC TERM 1690 1142431 - 1142397 - R 100 -12.4 -5.4148 | opp_overlap 1142397 TAAACAACTAAAAAA GGTTGGCTAAACAA GAAATAA TTGTTTAACCAACC TTTTTAATTTTGAGC TERM 1691 1142471 - 1142456 - R 100 -10.4 -5.67063 | opp_overlap 1142456 TTGAGCATAAAAAAA CCTCGC ATAA GCGAGG TTTAAAACATTATTA TERM 1692 1142456 - 1142471 + r 82 -10.4 -3.59247 | opp_overlap 1142456 TTGAGCATAAAAAAA CCTCGC ATAA GCGAGG TTTAAAACATTATTA csp2 1142684 - 1142484 - | cold shock protein CspA family protein LSA1153 1142886 - 1143542 + | hypothetical protein LSA1154 1143563 - 1143883 + | hypothetical protein LSA1155 1143876 - 1144058 + | integral membrane protein LSA1156 1144750 - 1144055 - | integral membrane protein TERM 1693 1144210 - 1144249 + g 100 -6.5 -5.96521 | opp_overlap 1144209 1144212 TTCCGATAAAGAAGC TACCAACAATTAGCCCA AAATAC TTGGCTTTTTGTTGGTA TTTTTTTTCCTTCGT TERM 1694 1144722 - 1144697 - G 74 -7.7 -3.96827 | AAAACCACCGATAAA GGTTAAAAACA TGGC TGTTCCTAACC GGTCGTGAAAATTAA TERM 1695 1144788 - 1144829 + r 78 -10.3 -3.04203 | opp_overlap 1144793, overlap 1144793 TTCTATTATACGCAA AAAAAGAACCGTGACAAAA TAAA TTTAGTCCCGGTTCTTTTC TAGTTTATAGATTGA TERM 1696 1144793 - 1144824 + r 91 -10.2 -4.64846 | opp_overlap 1144793, overlap 1144788 TTATACGCAAAAAAA GAACCGTGACAAAA TAAA TTTAGTCCCGGTTC TTTTCTAGTTTATAG TERM 1697 1144824 - 1144793 - R 100 -10.2 -5.50499 | opp_overlap 1144793 1144788 TTATACGCAAAAAAA GAACCGTGACAAAA TAAA TTTAGTCCCGGTTC TTTTCTAGTTTATAG mgsA 1145256 - 1144834 - | methylglyoxal synthase LSA1158 1146029 - 1145268 - | hypothetical protein TERM 1698 1146146 - 1146127 - R 100 -7.8 -5.79526 | opp_overlap 1146127 ATAGTGTAAAAAAAA GCAACGGC GTCA GCCACTGC TTTTTAGTTTAAACT TERM 1699 1146127 - 1146146 + r 70 -3.4 -4.99134 | opp_overlap 1146127 ATAGTGTAAAAAAAA GCAACGGC GTCA GCCACTGC TTTTTAGTTTAAACT LSA1159 1146865 - 1146170 - | cell surface protein precursor TERM 1700 1147162 - 1147148 - R 77 -2.8 -5.58209 | opp_overlap 1147149, overlap 1147149 TTAAATCCAAAAAAA TTGTCA ATC TGACAT CATTTACTGATACTT TERM 1701 1147395 - 1147422 + r 100 -14.4 -3.80893 | opp_overlap 1147395 AAACCTACAAAAAAA GAGCTATTAAAC TTTA GTTTAATAGCTC TTTCCATTCTAGGAT TERM 1702 1147422 - 1147395 - R 100 -14.4 -5.68039 | opp_overlap 1147395 AAACCTACAAAAAAA GAGCTATTAAAC TTTA GTTTAATAGCTC TTTCCATTCTAGGAT LSA1160 1147831 - 1147580 - | hypothetical protein TERM 1703 1148024 - 1148039 + r 88 -5.4 -5.68039 | TTGTATTTTCGCTAA GTCTGA GAAA TCAGGC TTTTTTTGTGCGTTT LSA1161 1148432 - 1148058 - | hypothetical protein LSA1162 1149729 - 1148425 - | DNA-repair protein (SOS response UmuC-like protein) LSA1163 1149974 - 1149729 - | hypothetical protein LSA1164 1150368 - 1149994 - | hypothetical protein TERM 1704 1150371 - 1150352 - G 100 -11.4 -5.71983 | opp_overlap 1150352 TTAACCATAAAAAAA GCAGCGGC GTCA GCCACTGC TTTTTAGTTTAAACT TERM 1705 1150352 - 1150371 + g 100 -9.2 -4.99134 | opp_overlap 1150352 TTAACCATAAAAAAA GCAGCGGC GTCA GCCACTGC TTTTTAGTTTAAACT LSA1165 1151120 - 1150395 - | cell surface protein precursor TERM 1706 1150667 - 1150684 + g 71 -4.9 -4.62803 | overlap 1150654 TTGTTTGTTGTTGTT TAACAAC TGGC GTTGTTG TTTGTTGTTGTTTAA TERM 1707 1151319 - 1151357 + r 100 -14.3 -5.48303 | gap 1, opp_overlap 1151330, overlap 1151330 TATAGGATTCTTATC CAA-CAAAAAAACGACTT AAAA AAGTCGTTTTTTTGCTTG TTTTTTTAAGATTCT TERM 1708 1151345 - 1151330 - R 100 -7.6 -5.8187 | opp_overlap 1151319 1151330 TATCCAACAAAAAAA CGACTT AAAA AAGTCG TTTTTTTGCTTGTTT TERM 1709 1151330 - 1151345 + r 100 -7.6 -5.73672 | opp_overlap 1151330, overlap 1151319 TATCCAACAAAAAAA CGACTT AAAA AAGTCG TTTTTTTGCTTGTTT LSA1166 1153405 - 1151363 - | putative potassium transport protein TERM 1710 1152788 - 1152804 + g 71 -9.5 -3.06133 | opp_overlap 1152791, overlap 1152791 TGCGTAGTAAGGATT CAATGCT TTA AGCATTG TTAAATCCCCCATTA LSA1167 1153563 - 1153736 + | hypothetical protein TERM 1711 1153731 - 1153777 + F 100 -12.7 -5.64421 | gap 1, opp_overlap 1153738 1153746 ATTTTTCTTAAACAG CGTTAAATCAAAAAA-GGTTGC TGAA GCAACCTTTTTTTGATTGAATG TTTTTTATTTACCGT TERM 1712 1153770 - 1153738 - f 87 -11.6 -3.62518 | gap 1, opp_overlap 1153731, overlap 1153746 TTAAACAGCGTTAAA TCAAAAAA-GGTTGC TGAA GCAACCTTTTTTTGA TTGAATGTTTTTTAT TERM 1713 1153761 - 1153746 - f 100 -9 -5.37593 | opp_overlap 1153731, overlap 1153738 CGTTAAATCAAAAAA GGTTGC TGAA GCAACC TTTTTTTGATTGAAT LSA1168 1153869 - 1154348 + | putative nucleoside deoxyribosyltransferase TERM 1714 1154357 - 1154390 + T 100 -13.3 -5.63103 | opp_overlap 1154357 TTATTAATTAAAAAA TGTCTCGCTAAACTA TTCT TGGTCTAGCGAGACA TTTTTTTAATTAGAA TERM 1715 1154390 - 1154357 - T 100 -13.3 -5.30155 | opp_overlap 1154357 TTATTAATTAAAAAA TGTCTCGCTAAACTA TTCT TGGTCTAGCGAGACA TTTTTTTAATTAGAA LSA1169 1155773 - 1154400 - | 6-phospho-beta-glucosidase glycoside hydrolase family 1 protein TERM 1716 1156039 - 1156081 + r 78 -5.7 -4.96848 | opp_overlap 1156039 TCGATACTCATAAGA TACCCGATTTACTCTCT TCCCCAATT AGAGTTTAAGTCGGGTA TTTTTGTGTAAAAAA TERM 1717 1156114 - 1156099 - R 88 -5.4 -5.75342 | opp_overlap 1156099 TTTGTGTAAAAAAAA TAGCCC TCAC GGACTA TTTGTTAATTATGCA LSA1170 1156842 - 1156123 - | MIP family facilitator protein LSA1171 1157058 - 1157732 + | extracellular protein precursor TERM 1718 1157807 - 1157786 - f 78 -8.9 -3.65902 | opp_overlap 1157786 1157791, overlap 1157791 TTTACGCCATTCAAA TAAAATGCT GGGG AGCATTTTA TTTTTGAAACTATGG TERM 1719 1157786 - 1157807 + F 90 -8.9 -4.61231 | opp_overlap 1157786 1157791, overlap 1157791 TTTACGCCATTCAAA TAAAATGCT GGGG AGCATTTTA TTTTTGAAACTATGG TERM 1720 1157791 - 1157802 + F 81 -4.4 -5.26119 | opp_overlap 1157786 1157791, overlap 1157786 GCCATTCAAATAAAA TGCT GGGG AGCA TTTTATTTTTGAAAC TERM 1721 1157802 - 1157791 - f 74 -4.4 -4.90778 | opp_overlap 1157791 1157786, overlap 1157786 GCCATTCAAATAAAA TGCT GGGG AGCA TTTTATTTTTGAAAC TERM 1722 1158045 - 1158020 - g 90 -11.3 -3.73968 | gap 1, opp_overlap 1158019 1158018 AAATTGGCGATCAAA CCCATTCAGTCA AAG TGACTG-ATGGG ACTTTTGAAGTTGAT TERM 1723 1158199 - 1158217 + G 85 -7.4 -4.77036 | opp_overlap 1158189 TACAATCCTTTGGCA CGCCAAAA AAA TTTAGGCG TTTTTGATGCTAAAG LSA1172 1157854 - 1158546 + | lipoprotein precursor TERM 1724 1158584 - 1158559 - f 100 -10.5 -5.46657 | opp_overlap 1158559 TAGGGCAATAAAAAA GACCTGAAGCT GACA ATCTTCAGGTC TTTTTTATTTAATTA TERM 1725 1158559 - 1158584 + F 100 -10.5 -5.72053 | opp_overlap 1158559 TAGGGCAATAAAAAA GACCTGAAGCT GACA ATCTTCAGGTC TTTTTTATTTAATTA usp4 1158773 - 1159207 + | universal stress protein UspA family protein LSA1174 1159464 - 1159607 + | hypothetical protein TERM 1726 1159654 - 1159615 - f 83 -9.4 -3.93237 | opp_overlap 1159615 TCAAATAATTAATAA GCGTCTAGTCTTAAACAA AATT TTGTTTAGCACTAGGCGC TTTACTTTTGCGCTC TERM 1727 1159615 - 1159654 + F 100 -13.8 -4.20806 | opp_overlap 1159615 TCAAATAATTAATAA GCGTCTAGTCTTAAACAA AATT TTGTTTAGCACTAGGCGC TTTACTTTTGCGCTC LSA1175 1159747 - 1159953 + | hypothetical protein LSA1176 1160018 - 1160605 + | hypothetical protein TERM 1728 1160795 - 1160781 - g 70 -7.2 -3.86015 | opp_overlap 1160780 1160777 CATCTTCTGCAGAAA TGGTTT CTA AAACCA CTACTTCTTCAGCAA LSA1177 1160627 - 1161355 + | lipoprotein precursor LSA1178 1161377 - 1161688 + | hypothetical protein TERM 1729 1161707 - 1161733 + T 86 -4.4 -5.626 | AGATAAATTAAAGTC GGGTCAAGCA TCAATTT TGCCTGACTC TTTTTTTATACACTA TERM 1730 1161778 - 1161754 - T 100 -11.6 -5.24989 | opp_overlap 1161754 TTATACACTAAAAAA GCGACTAAAA ATTAA TTTTAGTCGC TTTCTTTAAAACGAA TERM 1731 1161754 - 1161778 + T 95 -11.6 -4.41348 | opp_overlap 1161754 TTATACACTAAAAAA GCGACTAAAA ATTAA TTTTAGTCGC TTTCTTTAAAACGAA pgi 1163150 - 1161804 - | glucose-6-phosphate isomerase TERM 1732 1163078 - 1163093 + g 70 -7.6 -3.61468 | CAGCATTAACCATTG CTTGCA TTTC TGCAAG TTCGTTTGATTGAAC tnpA-ISLsa3 1163252 - 1163500 + | IS4 family transposase tnpB-ISLsa3 1163443 - 1164225 + | IS4 family transposase TERM 1733 1164974 - 1164946 - T 100 -8.2 -5.16572 | opp_overlap 1164948 ATGGAATTTAAAAAA GATGACCCCTAT TCAAT ATAGGAGGCATC TTCAAGCAGCTTAAT LSA1182 1165688 - 1165062 - | cytochrome P450 (C-terminal fragment), truncated tnpA4-IS1520 1165708 - 1165959 + | IS3 family transposase tnpB4-IS1520 1165980 - 1166777 + | IS3 family transposase TERM 1734 1166872 - 1166858 - T 70 -6.4 -4.09739 | overlap 1166859 TGAACGGGGCTAAAA CTTCGG CCT CCGAAA ATTAAATTAAGTAAT LSA1183_c 1167626 - 1166874 - | cytochrome P450 (N-terminal fragment), truncated LSA1184 1167823 - 1167873 + | hypothetical protein TERM 1735 1167878 - 1167904 + F 76 -6.6 -4.53034 | opp_overlap 1167878, overlap 1167888 AAAGCCGCTAAGTGA GATTGTATACCG TCG TGGGATACAGTC TTTTGATTGTATCCA TERM 1736 1167954 - 1167990 + F 100 -14.7 -4.9792 | TCGATTGAATTTTAA GCCTACATGGATTTT ACTCGAG GAAATCCATGTAGGC TTTTTCTGTCCCCTA TERM 1737 1167998 - 1168023 + F 100 -14.1 -5.95539 | ATGTAGGCTTTTTCT GTCCCCTACAT GACT ATGTGGGGGAC TTTTTTTATTTGAGA TERM 1738 1168091 - 1168109 + F 72 -8.2 -3.53811 | opp_overlap 1168091 1168095, overlap 1168092 GCCTAGTCCAGTGAA TGAACGAT GTA ATCGTTCG TTTGCGGGACGTAGC TERM 1739 1168092 - 1168108 + F 72 -9.5 -2.72144 | opp_overlap 1168091 1168095, overlap 1168091 CCTAGTCCAGTGAAT GAACGAT GTA ATCGTTC GTTTGCGGGACGTAG LSA1185 1168173 - 1169174 + | ABC transporter substrate-binding protein TERM 1740 1169835 - 1169863 + G 70 -8.1 -3.63059 | overlap 1169836 TATCCGCCATCATCA TTGGTGAACGGCT ATT AGTCGGTCACCAC TTCATTTCTAAATTA TERM 1741 1169836 - 1169862 + G 81 -11.6 -2.77113 | overlap 1169835 ATCCGCCATCATCAT TGGTGAACGGCT ATT AGTCGGTCACCA CTTCATTTCTAAATT LSA1186 1169171 - 1170034 + | ABC transporter transmembrane protein LSA1187 1170031 - 1170789 + | ABC transporter ATP-binding protein TERM 1742 1170794 - 1170844 + F 90 -7 -5.18371 | opp_overlap 1170794 TTAATGCCTAAAAAA TAACAAGCGTTCCTAGTTCTGAAT CAT GTTCAGAATATGGGATACTTGTTA TTTTATTTTGTCACA pox1 1170993 - 1172828 + | pyruvate oxidase TERM 1743 1172846 - 1172869 + T 100 -9.7 -5.243 | opp_overlap 1172846 TTTTCAAATTAAAAA GCATCCTAA CACATA TTAGGATGC TTTTTTGATACTTTA TERM 1744 1172869 - 1172846 - T 100 -10.4 -4.98531 | opp_overlap 1172846 TTTTCAAATTAAAAA GCATCCTAAC ACAT ATTAGGATGC TTTTTTGATACTTTA LSA1189 1173639 - 1172944 - | integral membrane protein TERM 1745 1173929 - 1173902 - R 100 -10.7 -5.40474 | opp_overlap 1173902 ATTCGCTCAAAAAAA GTGTCGCTCAA TTTAAT TTGAACGACAC TTTTTAAATACTTTT TERM 1746 1173902 - 1173929 + r 95 -8.5 -4.7329 | opp_overlap 1173902 ATTCGCTCAAAAAAA GTGTCGCTCAA TTTAAT TTGAACGACAC TTTTTAAATACTTTT LSA1190 1174264 - 1173944 - | putative 4-carboxymuconolactone decarboxylase LSA1191 1174693 - 1174280 - | hypothetical protein LSA1192 1175131 - 1174712 - | MerR family transcriptional regulator LSA1193 1175785 - 1175147 - | putative oxidoreductase TERM 1747 1176021 - 1176048 + G 71 -8.4 -3.5672 | opp_overlap 1176028, overlap 1176019 CCAGTGTGATGGGCG CCAACGACGGGA TTCT TTCCGTTGCTGG TATTGTTATTGGGGT LSA1194 1175960 - 1176640 + | hypothetical protein TERM 1748 1177264 - 1177250 - g 74 -6.4 -4.42788 | opp_overlap 1177253, overlap 1177253 CTGAAGCCTACAAAA TGACGG GGA CCATCA TCGCCGTTACTGTGG LSA1195 1176700 - 1177407 + | hypothetical protein TERM 1749 1177426 - 1177457 + T 100 -10.2 -5.58074 | opp_overlap 1177426 TAAATAACTAAAAAA GCCTCGGGACAAAA TAAT TTTTGTGCCAAGGC TTTTTTTAATGATTA TERM 1750 1177457 - 1177426 - T 100 -12.4 -5.4148 | opp_overlap 1177426 TAAATAACTAAAAAA GCCTCGGGACAAAA TAAT TTTTGTGCCAAGGC TTTTTTTAATGATTA LSA1196 1178071 - 1177463 - | putative lysophospholipase L LSA1197 1178868 - 1178068 - | hypothetical protein TERM 1751 1178837 - 1178820 - G 71 -8.5 -3.53761 | TAATCGCCCGTGAAA TTGGGAT GGTC ATCCCAA AATCATCAGATTCAA LSA1198 1179353 - 1178877 - | putative trehalose and glucose-specific phosphotransferase system, enzyme EIIA TERM 1752 1179333 - 1179344 + g 71 -2.2 -5.19261 | gap 1 GGGCGCTGTTAGTTG GC-CC GCA GGTGC TTTTTTCATAAATTT treC 1181031 - 1179382 - | trehalose-6-phosphate phosphoglucohydrolase (phosphotrehalase) TERM 1753 1179472 - 1179495 + g 70 -7.4 -3.78904 | overlap 1179492 ATTACTCATCATCAC CGCTTTAACG GCCG CGTTAGCGCG TTGTTGCGTTTGATC LSA1200 1182523 - 1181045 - | putative trehalose and glucose-specific phosphotransferase system, enzyme IIBC LSA1201 1182695 - 1183408 + | GntR family transcriptional regulator TERM 1754 1183457 - 1183419 - T 100 -14 -5.27779 | opp_overlap 1183419 TCTAATATCAAAAAA GAAAGTTAGCCGACATAC TCA GGGTGTCAGCTAACTTTC TTTTTTATTAACCAC TERM 1755 1183419 - 1183457 + T 100 -14 -5.4505 | opp_overlap 1183419 TCTAATATCAAAAAA GAAAGTTAGCCGACATAC TCA GGGTGTCAGCTAACTTTC TTTTTTATTAACCAC LSA1202 1183923 - 1183465 - | hypothetical protein TERM 1756 1183724 - 1183738 + g 70 -7.2 -3.83006 | TGTTCGACAAATCGC TTTAGC GCT GCTAAA TTCTTAATTGAATAT TERM 1757 1183850 - 1183836 - G 70 -3.6 -4.76041 | overlap 1183837 TATATTCACTAAAAA CTGTTT CAA AAACAA TAAATTGTTCTAAAA TERM 1758 1184081 - 1184050 - R 100 -16.2 -5.95539 | opp_overlap 1184050 CTTGAAATAAAAAAA GTGCAATTAACAAA ATAT TTTGTTAATTGCAC TTTTTCATTAAATCG TERM 1759 1184050 - 1184081 + r 100 -16.2 -4.88407 | opp_overlap 1184050 CTTGAAATAAAAAAA GTGCAATTAACAAA ATAT TTTGTTAATTGCAC TTTTTCATTAAATCG LSA1203 1186644 - 1184101 - | hypothetical protein TERM 1760 1186790 - 1186755 - R 91 -6.2 -5.63517 | opp_overlap 1186755 TTTTCAAACAAAAAA GCAGACTTCTACCT ATTTATGA AGGTACCAGTCTGC TTTTTAATTAAGGTT TERM 1761 1186755 - 1186790 + r 78 -6.2 -4.87893 | opp_overlap 1186755 TTTTCAAACAAAAAA GCAGACTTCTACCT ATTTATGA AGGTACCAGTCTGC TTTTTAATTAAGGTT LSA1204 1187676 - 1186810 - | putative sugar transporter TERM 1762 1187958 - 1187926 - R 100 -10.7 -4.88407 | opp_overlap 1187935 TGACGTAATTAAAAA GGTCTCAAAGACCAA CCA TTCGTCTTTGACACC CACAATTTAATGTTT LSA1205 1188573 - 1187965 - | integral membrane protein TERM 1763 1188406 - 1188381 - G 81 -4.1 -5.26155 | overlap 1188383 AGACAAATATAAAAA GTTTCAATTCA TACT TAAATTGAATC CGACGTTTTTTAAGG TERM 1764 1188475 - 1188453 - G 71 -4.3 -4.84359 | GCAGTCCGATAAAAA TAAAACAAT ACAAA ATTGTCTTA TCCAAACTCTCTACC LSA1206 1188786 - 1189844 + | putative glycosyl transferase, group 1 TERM 1765 1192073 - 1192057 - g 71 -6.6 -4.20136 | overlap 1192066 ATCCCTAAAAGCAAA GCACTA AAAGA TAGTGC ATCTACCTCGTCAAG LSA1207 1189948 - 1192125 + | putative phosphoglycerol transferase TERM 1766 1192164 - 1192139 - T 100 -9.8 -5.27938 | opp_overlap 1192139 AGTCCCAAATAAAAA GTGCCATTCC GAATTT GGAATGACAC TTTTTTGTATTTAAC TERM 1767 1192139 - 1192164 + T 100 -8.3 -5.56264 | opp_overlap 1192139 AGTCCCAAATAAAAA GTGCCATTCCG AATT TGGAATGACAC TTTTTTGTATTTAAC LSA1208 1192636 - 1192175 - | hypothetical protein LSA1209 1193382 - 1192630 - | hypothetical protein TERM 1768 1192966 - 1192947 - G 70 -2.8 -4.92757 | gap 1, overlap 1192948 CGACTAACAACAAAA GGCTGATCG TTA CGA-CAGCA AAAAATAGTAAGCAA TERM 1769 1193485 - 1193459 - R 100 -9.6 -6.04324 | opp_overlap 1193459 GTAAAAAATAAAAAA GCCAGCATAAAA TAA TTTTATACTGAC TTTCATAACGATTTA LSA1210 1194088 - 1193498 - | putative cytosine:cation symporter (C-terminal fragment), authentic frameshift LSA1211 1194856 - 1194104 - | putative cytosine:cation symporter (N-terminal fragment), authentic frameshit TERM 1770 1194919 - 1194894 - H 91 -6.1 -5.73978 | gap 1 ATCACAAACAAAAAA GGCC-CACTCCA AAA CAGAGCGAGGCC ATTAAATCCCGATAG LSA1212 1195067 - 1195951 + | cytosine deaminase-like protein LSA1213 1195963 - 1196301 + | cytosine deaminase TERM 1771 1196314 - 1196332 + T 100 -8.8 -5.65927 | opp_overlap 1196314 TAAAAGCTAAAAAAA CGCAACCT TGT AGGCTGCG TTTTTTGTTTGCGTA TERM 1772 1196332 - 1196314 - T 100 -11 -5.61824 | opp_overlap 1196314 TAAAAGCTAAAAAAA CGCAACCT TGT AGGCTGCG TTTTTTGTTTGCGTA LSA1214 1197788 - 1196352 - | two-component system, sensor histidine kinase TERM 1773 1196755 - 1196768 + g 80 -3.7 -5.27923 | overlap 1196756 AGCACAATGGTATCA CCGGC ATCC GCCGC TTTTTTCTGAAGTTG TERM 1774 1196756 - 1196767 + g 70 -7.2 -3.75669 | overlap 1196755 GCACAATGGTATCAC CGGC ATCC GCCG CTTTTTTCTGAAGTT TERM 1775 1197465 - 1197477 + g 70 -2.7 -5.06414 | CTGCCCCTTCTTCAG GTATT TCC AGTAC TTTTTCTTAACGGAG LSA1215 1198528 - 1197788 - | two component system, response regulator TERM 1776 1198457 - 1198445 - G 75 -9.1 -3.72968 | opp_overlap 1198444 1198443 1198445 ACCATCATACGCAAA GTGGG CAT CCCAC GCTTCTTTTTGAAAG TERM 1777 1198775 - 1198752 - H 77 -11 -2.52543 | opp_overlap 1198752 ATCTCCTGTAAGCTA GGGCTTAACC AATT GGTTAGGCCC TTTTTTTATGACCAG TERM 1778 1198752 - 1198775 + H 100 -13.2 -5.60993 | opp_overlap 1198752 ATCTCCTGTAAGCTA GGGCTTAACC AATT GGTTAGGCCC TTTTTTTATGACCAG TERM 1779 1198862 - 1198846 - g 78 -7.3 -4.56775 | opp_overlap 1198846 1198856 ACTTTTTTTCAAAAA CCTGAAG ATT CTTCAAG ATTTGAAGTTCATGA LSA1216 1198814 - 1199041 + | hypothetical protein LSA1218 1199176 - 1199940 + | haloacid dehalogenase family hydrolase TERM 1780 1199957 - 1199982 + F 91 -4.7 -5.87996 | opp_overlap 1199945 1199957 CTAGTGCTATTTAAA CACCATTCC ACTCGCAC GGCATGGTG TTTTTTTATTGCTTA LSA1219 1200077 - 1201468 + | putative cationic amino acid transport protein TERM 1781 1201482 - 1201515 + T 100 -12 -5.61596 | gap 1, opp_overlap 1201482 AGGGTATCAAAAAAA GCGTAACACCT-AAT TGATT ATTGAGGTGTTACGC TTTTTTTATGCGCAT TERM 1782 1201515 - 1201482 - T 100 -12 -5.52986 | gap 1, opp_overlap 1201482 AGGGTATCAAAAAAA GCGTAACACCT-AAT TGATT ATTGAGGTGTTACGC TTTTTTTATGCGCAT citG 1202385 - 1201510 - | triphosphoribosyl-dephospho-coenzymeA synthase TERM 1783 1202317 - 1202342 + g 79 -11.3 -2.55668 | overlap 1202316 1202319 1202323 TAATCCTGGCTTAGG CGCTAATTGCA CTTC TGCAATTAGTG ATTGGTATGCAAGTA TERM 1784 1202319 - 1202340 + g 75 -10.3 -2.81547 | overlap 1202317 1202316 1202323 ATCCTGGCTTAGGCG CTAATTGCA CTTC TGCAATTAG TGATTGGTATGCAAG citR 1203073 - 1202378 - | citrate catabolism transcriptional regulator oadA 1204555 - 1203155 - | oxaloacetate decarboxylase citX 1205100 - 1204549 - | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase citF 1206625 - 1205093 - | citrate lyase, alpha subunit citE 1207482 - 1206625 - | citrate lyase, beta subunit citD 1207796 - 1207491 - | citrate lyase subunit gamma citC 1208791 - 1207802 - | [citrate (pro-3S)-lyase] ligase (citrate lyase synthetase) TERM 1785 1208287 - 1208301 + g 70 -7.8 -3.66646 | opp_overlap 1208276 1208286, overlap 1208289 GATATAGTACATCAC TAGCGG CAG CCGCTG TTTCAATCAAATATT TERM 1786 1208289 - 1208299 + g 71 -8.2 -3.41073 | opp_overlap 1208286, overlap 1208287 TATAGTACATCACTA GCGG CAG CCGC TGTTTCAATCAAATA LSA1228 1208916 - 1208794 - | hypothetical protein oadB 1210051 - 1208930 - | oxaloacetate decarboxylase, beta subunit oadG 1210452 - 1210063 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 1787 1210268 - 1210287 + g 89 -12.2 -3.34344 | overlap 1210277 ATTGGTGCTGCCATC GCATCAGC ACCA GCTGATGC TTGATTCACAGCTGG TERM 1788 1210377 - 1210391 + g 72 -6.4 -4.29326 | CTGGTGCCACCGGTG TTGGTG TGC CGCCAA TTTCTTCCATTTCAA LSA1231 1210769 - 1210452 - | hypothetical protein citM 1212149 - 1210800 - | citrate:Mg(2+)(H+) symporter TERM 1789 1211103 - 1211091 - G 76 -7.7 -4.15029 | overlap 1211095 ATTTGAGATAAAGAA TGCAC CTG GTGCA GAAATAACAGCAATG TERM 1790 1212280 - 1212331 + r 100 -10 -4.84918 | gap 1, opp_overlap 1212288, overlap 1212288 ATCGTTAGAAATATC AAATAAAAGAGGTATTAATAAGT CCTAACA ACTTATTAATACCTCTTT-ATTA TTTTATCTTTATCAC TERM 1791 1212288 - 1212324 + r 100 -14.1 -4.73973 | opp_overlap 1212288, overlap 1212280 AAATATCAAATAAAA GAGGTATTAATAAGT CCTAACA ACTTATTAATACCTC TTTATTATTTTATCT TERM 1792 1212324 - 1212288 - R 100 -14.8 -5.00923 | opp_overlap 1212280 1212288 AAATATCAAATAAAA GAGGTATTAATAAGTC CTAAC AACTTATTAATACCTC TTTATTATTTTATCT birA2 1213110 - 1212343 - | biotin-[acetyl-CoA-carboxylase] ligase LSA1234 1213394 - 1213131 - | hypothetical protein TERM 1793 1213528 - 1213492 - R 100 -15.4 -5.24129 | opp_overlap 1213485 TCTTTTTACAAAAAA GACCGTCAATCAAC GGATAAATT GTTGATTGACGGTC TCAAAAGTTAATTGT dnaJ 1214709 - 1213558 - | chaperone protein DnaJ (heat-shock protein Hsp40) TERM 1794 1214784 - 1214814 + r 100 -7 -5.48303 | gap 1, opp_overlap 1214784 GATTGATTAAAAAAA GCCAAAGCCCTAG ACCATA CTAGG-TTTTGGC TTTTTTTAACGTTCT TERM 1795 1214814 - 1214784 - R 88 -4.8 -5.53991 | gap 1, opp_overlap 1214784 GATTGATTAAAAAAA GCCAAAGCCCTAG ACCATA CTAGGT-TTTGGC TTTTTTTAACGTTCT dnaK 1216670 - 1214829 - | molecular chaperone DnaK grpE 1217309 - 1216707 - | Co-chaperone protein GrpE hrcA 1218383 - 1217325 - | heat-inducible transcription repressor TERM 1796 1218199 - 1218216 + g 73 -9.9 -3.06696 | opp_overlap 1218193 1218202, overlap 1218202 GAAGGAACACGTCCA GAAGACG AATG CGTCTTC TCTATTAAACCGACA TERM 1797 1218547 - 1218521 - R 95 -10.9 -4.48877 | opp_overlap 1218521 CAAAGACTGATAAAA GGCCACACCCA AATGA TGAGTGTGACC TTTTCAAAGATTGCT TERM 1798 1218521 - 1218547 + r 70 -6.5 -4.11751 | opp_overlap 1218521 CAAAGACTGATAAAA GGCCACACCCA AATGA TGAGTGTGACC TTTTCAAAGATTGCT LSA1239 1219211 - 1218564 - | antibiotic isoleucine patch superfamily acetyltransferase TERM 1799 1219082 - 1219041 - G 72 -7.3 -4.00042 | gap 1 CTGTGGATTAAATAA GGC-GCGTGAGGCATCATCG CCC CAATGATATCGCACACAGCC GTCCTCAAAATTCTG LSA1240 1220497 - 1219358 - | coproporphyrinogen III oxidase LSA1241 1221450 - 1220497 - | bifunctional riboflavin kinase/FMN adenylyltransferase truB 1222386 - 1221469 - | tRNA-specific pseudouridylate synthase (tRNA pseudouridine synthase B) TERM 1800 1222487 - 1222524 + r 95 -10.6 -4.3898 | opp_overlap 1222491, overlap 1222490 1222491 TTATCATTAACGCAC AAAACGCCGGGACAAC CATTAA GTTGTCTCGGCGCTTA TTTTATGAAGGTAAT TERM 1801 1222490 - 1222521 + r 93 -12.3 -4.31397 | opp_overlap 1222491, overlap 1222487 1222491 TCATTAACGCACAAA ACGCCGGGACAAC CATTAA GTTGTCTCGGCGC TTATTTTATGAAGGT TERM 1802 1222491 - 1222520 + r 100 -15.8 -3.18115 | opp_overlap 1222491, overlap 1222490 1222487 CATTAACGCACAAAA CGCCGGGACAAC CATTAA GTTGTCTCGGCG CTTATTTTATGAAGG TERM 1803 1222520 - 1222491 - R 100 -14.3 -4.48221 | opp_overlap 1222490 1222487 1222491 CATTAACGCACAAAA CGCCGGGACAACC ATTA AGTTGTCTCGGCG CTTATTTTATGAAGG LSA1243 1223262 - 1222522 - | hypothetical protein LSA1244 1223463 - 1223266 - | hypothetical protein LSA1245 1223971 - 1223453 - | hypothetical protein LSA1246 1225283 - 1223964 - | glycosyl transferase family protein TERM 1804 1224887 - 1224873 - G 80 -6.4 -4.77775 | ATTGGACAAAATAAA TTCGCC TTT GGCAAA TCCTAAAGCACTATT TERM 1805 1225081 - 1225094 + g 77 -4.5 -4.96646 | opp_overlap 1225072 AAATGATCAATCGTA GCTTC AATT GAGGC TTTTTCATTATGTGC TERM 1806 1225519 - 1225493 - R 100 -21 -6.11229 | opp_overlap 1225493 ATCAAAACAAAAAAA GAGCACCGACGA ATT TCGTCGGTGCTC TTGGTCACAGCCTAA TERM 1807 1225493 - 1225519 + r 100 -21 -3.14564 | opp_overlap 1225493 ATCAAAACAAAAAAA GAGCACCGACGA ATT TCGTCGGTGCTC TTGGTCACAGCCTAA rbfA 1225887 - 1225531 - | ribosome-binding factor A infB 1228723 - 1225910 - | translation initiation factor IF-2 TERM 1808 1226620 - 1226631 + g 86 -5.8 -5.27779 | overlap 1226604 CACGTTCTTCACCAG CAGC ACGA GCTG TTTTTTCGTCTTCAA TERM 1809 1228551 - 1228564 + g 74 -4.5 -4.86731 | overlap 1228554 GTTGCTGGTTTACTT GCAGC TGGT GTTGC TTTTGTTTGGAAAGC LSA1249 1229046 - 1228741 - | 50S ribosomal protein L7A family LSA1250 1229345 - 1229043 - | hypothetical protein nusA 1230574 - 1229357 - | transcription elongation factor NusA TERM 1810 1229599 - 1229611 + g 71 -3.3 -5.055 | opp_overlap 1229599 ACTTAGCAGCTAAAC GGGCA TTT TGACC TTTTTTACCGATTGC LSA1252 1230805 - 1230593 - | hypothetical protein LSA1253 1231065 - 1230904 - | hypothetical protein TERM 1811 1231140 - 1231119 - R 100 -13.1 -5.06414 | GTGCTCCAATAAAAA GAGTGAGCA TTTC TGCTCACTC GCTCTGAAGTATCTA LSA1254 1231639 - 1231340 - | hypothetical protein TERM 1812 1231471 - 1231492 + g 70 -7.3 -3.88777 | overlap 1231472 CTAATTCTTCTTTCA CGCGTTCAA TATC TTGAACGCC TTCTTCTGCTGTCTT TERM 1813 1231472 - 1231491 + g 79 -10.8 -2.92182 | overlap 1231471 TAATTCTTCTTTCAC GCGTTCAA TATC TTGAACGC CTTCTTCTGCTGTCT LSA1255 1233386 - 1231626 - | hypothetical protein TERM 1814 1232048 - 1232060 + g 81 -5.5 -5.10029 | opp_overlap 1232048 TTTTAACGTACCAAG GATGG TCA CCGTC TTTTTTACCGTTGAT TERM 1815 1233440 - 1233489 + r 100 -16.1 -3.70149 | gap 1, opp_overlap 1233446 1233448, overlap 1233448 ATTTATCGATTCCCA TTAAAATAGCCCACCTAAACTGCA GTC TGCAATCTAGGTGGGCT-TTTTAA TTTACATCATATCAA TERM 1816 1233484 - 1233446 - R 100 -17.6 -4.26076 | opp_overlap 1233440 1233448, overlap 1233448 CGATTCCCATTAAAA TAGCCCACCTAAACTGCA GTC TGCAATCTAGGTGGGCTT TTTAATTTACATCAT TERM 1817 1233482 - 1233448 - R 100 -20.2 -3.7331 | opp_overlap 1233448 1233440, overlap 1233446 ATTCCCATTAAAATA GCCCACCTAAACTGCA GTC TGCAATCTAGGTGGGC TTTTTAATTTACATC TERM 1818 1233448 - 1233482 + r 100 -15.8 -5.00138 | opp_overlap 1233446 1233448, overlap 1233440 ATTCCCATTAAAATA GCCCACCTAAACTGCA GTC TGCAATCTAGGTGGGC TTTTTAATTTACATC polC 1237831 - 1233491 - | DNA polymerase III PolC TERM 1819 1233726 - 1233739 + g 73 -5.3 -4.70659 | opp_overlap 1233726 TCTTGGATCAAGAAA TCAGA TGAA TCTGA TTTTTCGATGTCGAC TERM 1820 1235616 - 1235632 + g 100 -10.9 -4.35017 | opp_overlap 1235608, overlap 1235623 AAATAATGGGCATCG CCAGTTG CGA CAACTGG TTTGTTGAGTTTTTC TERM 1821 1237987 - 1237951 - R 100 -8.8 -5.28176 | CTCAGTGACAAAAAA CGAGTCTGAGACAAAA GCAAG TTTCATCCCAGGCTCG ACTAATGTCAGTTCA proS 1239715 - 1238006 - | prolyl-tRNA synthetase LSA1258 1241018 - 1239741 - | putative membrane-associated zinc metalloendopeptidase TERM 1822 1240715 - 1240693 - G 70 -7.6 -3.61764 | opp_overlap 1240687 1240693 1240693 1240711 TTAGCAATTTGGAAA GGCACCCCGT TTA ACGTGGTGAC CTTGTCACTTGTATT TERM 1823 1240711 - 1240723 + g 72 -7.7 -3.75655 | opp_overlap 1240693, overlap 1240693 1240693 1240687 ACCCCGTTTAACGTG GTGAC CTT GTCAC TTGTATTAATCTGTT TERM 1824 1240935 - 1240914 - G 70 -5.1 -4.53303 | CATGCCGACAGAAAA CTCACGCAC CAAA ATGCCTGAG CGCTTAGCCATGTAA TERM 1825 1241050 - 1241060 + r 70 -5.4 -4.3739 | TTTCAATACCGTCAT TCAG ATT CTGA TTTTATAGGGAACTG cdsA 1242013 - 1241225 - | phosphatidate cytidylyltransferase uppS 1242799 - 1242044 - | di-trans-poly-cis-decaprenylcistransferase (undecaprenyl diphosphate synthetase) TERM 1826 1242102 - 1242091 - G 71 -3 -4.93365 | overlap 1242095 GTTGATAAGTAAAAA TTGA TTTT TCAA AAACTTGCGGTGTAA TERM 1827 1242412 - 1242430 + g 71 -3 -4.95854 | overlap 1242413 1242416 TTTGCGCCGTATCAG CCATCGCA TCT TGCGCTGC TTTTTGCGTTTTTTC TERM 1828 1242452 - 1242472 + g 71 -8.3 -3.53343 | opp_overlap 1242452 CGTTTTTTCAGGTAA GTCATGGAT GTT ACCCATGAC TTTCACACGCACGTT TERM 1829 1242472 - 1242452 - G 76 -10.5 -3.05384 | opp_overlap 1242452 CGTTTTTTCAGGTAA GTCATGGAT GTT ACCCATGAC TTTCACACGCACGTT TERM 1830 1242683 - 1242694 + g 73 -7.2 -4.15044 | ATGGCCAGCAACTCT CGGC ATTA GCCG TTTGTTAGCCCAGCG LSA1261 1242967 - 1245714 + | putative autotransport protein TERM 1831 1245752 - 1245724 - T 100 -20.5 -5.65513 | opp_overlap 1245724 CATTAATCAAAAAAA GGCGTTGAGACAA AAT TTGTCTCAACGCC TTTTTCAATGACCGT TERM 1832 1245724 - 1245752 + T 100 -20.5 -4.66163 | opp_overlap 1245724 CATTAATCAAAAAAA GGCGTTGAGACAA AAT TTGTCTCAACGCC TTTTTCAATGACCGT frr 1246329 - 1245772 - | ribosome recycling factor (ribosome releasing factor) (RRF) pyrH 1247057 - 1246332 - | uridylate kinase TERM 1833 1247154 - 1247174 + r 84 -7.5 -4.57073 | opp_overlap 1247155, overlap 1247155 AAAACTGCAAAAAAA AGGAGCGCA AAT TGCGTTCCC TTTTTGAAGCAAATA TERM 1834 1247173 - 1247155 - R 100 -8.8 -5.82388 | opp_overlap 1247154 1247155 AAACTGCAAAAAAAA GGAGCGCA AAT TGCGTTCC CTTTTTGAAGCAAAT TERM 1835 1247155 - 1247173 + r 82 -11 -3.33922 | opp_overlap 1247155, overlap 1247154 AAACTGCAAAAAAAA GGAGCGCA AAT TGCGTTCC CTTTTTGAAGCAAAT TERM 1836 1247210 - 1247229 + r 88 -5.1 -5.49579 | opp_overlap 1247213 ATTTGATTTGACCCA TAACTTC ATCAAC GAAGTTA TTTTCTTTTTTCTCG tsf 1248068 - 1247193 - | elongation factor Ts TERM 1837 1247617 - 1247628 + g 82 -3 -5.44721 | AAGTATGAACCGAAG TGAT CGCC ATCA TTTTTTTCAACTAAT TERM 1838 1247900 - 1247910 + g 78 -5.4 -5.06414 | opp_overlap 1247879 CTAAACCTTCAGCAG CGAT CCG ATCG TTTTTCTTAGCAGCC TERM 1839 1248161 - 1248117 - R 74 -2.8 -5.40474 | opp_overlap 1248153 ATTGGTTTAAAAAAA GCTGTCCCACAAGTCAGGCA GTATT TGCGAAACCTCTAAGACAGC TTATTTGAATCTACT rpsB 1248969 - 1248175 - | 30S ribosomal protein S2 LSA1266 1249412 - 1249137 - | putative endonuclease LSA1267 1250148 - 1249405 - | putative methyltransferase TERM 1840 1250236 - 1250247 + H 74 -4.4 -5.00884 | TAGTTCGTTAAATCG CCTT AAAA AAGG TTTTTTGAAAGGAAT plsC 1250270 - 1250893 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1841 1250904 - 1250942 + T 100 -19 -4.79826 | opp_overlap 1250904 AATAACACAAAAAAA GACGCGCGCCAACGATGA AAC TTATCGTTGACGTGCGTC TTTTTAGTACTCTAT TERM 1842 1250942 - 1250904 - T 100 -16.8 -5.86465 | opp_overlap 1250904 AATAACACAAAAAAA GACGCGCGCCAACGATGA AAC TTATCGTTGACGTGCGTC TTTTTAGTACTCTAT LSA1269 1251889 - 1250954 - | putative extracellular hydrolase precursor (lipase/esterase) LSA1270 1252022 - 1251966 - | hypothetical protein LSA1271 1253852 - 1252062 - | putative multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits LSA1272 1255599 - 1253854 - | putative multidrug ABC exporter, ATP-binding and membranespanning/permease subunits TERM 1843 1254006 - 1253980 - G 80 -11.6 -2.66395 | opp_overlap 1253980, overlap 1253979 ATCCATGACGATAAT CTCATCAGCGTG CAT CACACTGCTGAG TCGATTGGCGGTAAT TERM 1844 1255724 - 1255684 - R 100 -12.2 -5.06414 | gap 1, opp_overlap 1255684 CTCTTCCAATAAAAA GAGG-GTTCCATACAAAAA TAAG TTTTTGTACGAAACGCCTC TTTAATTAAGTCATG TERM 1845 1255684 - 1255724 + r 74 -7.8 -3.94002 | gap 1, opp_overlap 1255684 CTCTTCCAATAAAAA GAGG-GTTCCATACAAAAA TAAG TTTTTGTACGAAACGCCTC TTTAATTAAGTCATG LSA1273 1255971 - 1255741 - | putative small extracellular protein precursor LSA1274 1256294 - 1256052 - | hypothetical protein TERM 1846 1256653 - 1256605 - g 79 -11.1 -3.20028 | gap 1, opp_overlap 1256617, overlap 1256603 CTTATTACAAAAGGA TCCCACTAAGCCA-CGGGCGAT CGAGTT AACGCCCGCTGGCTTAACGGCA ATTGGGGCGACACCC lexA 1256429 - 1257043 + | LexA repressor TERM 1847 1257051 - 1257072 + T 100 -13.1 -5.82281 | opp_overlap 1257051 GCATGTAATAAAAAA GAAGTTCGC TTAG GCGAACTTC TTTTTTTGTCTATTT TERM 1848 1257072 - 1257051 - T 100 -13.1 -5.4833 | opp_overlap 1257051 GCATGTAATAAAAAA GAAGTTCGC TTAG GCGAACTTC TTTTTTTGTCTATTT apt 1257695 - 1257177 - | adenine phosphoribosyltransferase TERM 1849 1257529 - 1257513 - G 72 -7.2 -4.06904 | overlap 1257509 1257506 GCAGCCAACGATAAA GCCCCG GGCTT CAGGGC CAACGATCATTTCAA TERM 1850 1257669 - 1257638 - G 82 -10.2 -3.72743 | gap 1, overlap 1257634 TATCACGAAAAGTAA CGCCAGC-TTCCGGA AAA TCCGGAACACTTGCG ACATAATCTTTAAAG recJ 1260031 - 1257719 - | single-strand DNA-specific exonuclease RecJ TERM 1851 1258279 - 1258268 - G 77 -3.6 -5.1861 | TTTATCATTAAAAAA GACG TAGT CGCC TGTTGATTGGAATAA galE2 1260176 - 1261168 + | UDP-glucose 4-epimerase TERM 1852 1261217 - 1261175 - f 95 -13 -4.06502 | opp_overlap 1261176 1261180, overlap 1261176 1261180 GATCGCTAAACTAAA TTAAAGCAGTTCAAACCC TAATGAC GGATTTGAACTGCTTTAT TTGTTATAATAAAAA TERM 1853 1261176 - 1261216 + F 100 -14.3 -4.35483 | opp_overlap 1261175 1261176 1261180, overlap 1261180 ATCGCTAAACTAAAT TAAAGCAGTTCAAACCC TAATGAC GGATTTGAACTGCTTTA TTTGTTATAATAAAA TERM 1854 1261216 - 1261176 - f 100 -16.5 -3.03419 | opp_overlap 1261176 1261180, overlap 1261175 1261180 ATCGCTAAACTAAAT TAAAGCAGTTCAAACCC TAATGAC GGATTTGAACTGCTTTA TTTGTTATAATAAAA TERM 1855 1261180 - 1261212 + F 100 -10.7 -4.7458 | opp_overlap 1261176 1261175 1261180, overlap 1261176 CTAAACTAAATTAAA GCAGTTCAAACCC TAATGAC GGATTTGAACTGC TTTATTTGTTATAAT TERM 1856 1261212 - 1261180 - f 95 -12.9 -4.17878 | opp_overlap 1261180 1261176, overlap 1261176 1261175 CTAAACTAAATTAAA GCAGTTCAAACCC TAATGAC GGATTTGAACTGC TTTATTTGTTATAAT LSA1281 1261254 - 1261619 + | hypothetical protein LSA1282 1261636 - 1261962 + | hypothetical protein TERM 1857 1262003 - 1261970 - T 100 -17.7 -4.90266 | opp_overlap 1261970 TCGACTAATTAAAAA GCCTCGTAATTGATT TAAC AACCAATTACGAGGC TTTTTTAGTTATACT TERM 1858 1261970 - 1262003 + T 100 -15.5 -5.33848 | opp_overlap 1261970 TCGACTAATTAAAAA GCCTCGTAATTGATT TAAC AACCAATTACGAGGC TTTTTTAGTTATACT LSA1283 1263847 - 1262012 - | cell surface protein precursor TERM 1859 1263351 - 1263341 - G 74 -4.6 -4.75308 | ATTAATATCTAAAAA GCCC AAA GAGC CCATGATCAAAGACA TERM 1860 1263694 - 1263714 + g 70 -2.5 -4.92828 | GCTTTTTTGTATTGC CATCGATTG ATT CTGTTGATG TTTCTTTTTCGGTTT LSA1284 1264232 - 1263837 - | hypothetical protein LSA1285 1264803 - 1264222 - | hypothetical protein tnpA5-IS1520 1264928 - 1265179 + | IS3 family transposase tnpB5-IS1520 1265200 - 1265997 + | IS3 family transposase TERM 1861 1266092 - 1266078 - T 70 -6.4 -4.09739 | overlap 1266079 TGAACGGGGCTAAAA CTTCGG CCT CCGAAA ATTAAATTAAGTAAT LSA1286_c 1266570 - 1266094 - | hypothetical protein TERM 1862 1266625 - 1266592 - R 100 -8.9 -4.83169 | opp_overlap 1266595 AGCCTCCTATAAAAA TAAGGGGTGGACAAA TCAC TTTGCCTGCCCCTTA TCCAACACATCATTC TERM 1863 1266595 - 1266622 + r 70 -8.4 -3.29144 | opp_overlap 1266592 CTCCTATAAAAATAA GGGGTGGACAAA TCAC TTTGCCTGCCCC TTATCCAACACATCA LSA1287 1267302 - 1266691 - | cell surface protein precursor TERM 1864 1267367 - 1267415 + r 100 -18 -4.35085 | gap 1, opp_overlap 1267371 1267381, overlap 1267370 1267371 1267381 ACGTAATCTATCTTC TAAAT-GACAAAAAAGGGATACC AAAT GGTATCCCTTTTTTGTTGATTTA TCTTTTTTTGAAACT TERM 1865 1267370 - 1267411 + r 100 -14.7 -4.72373 | opp_overlap 1267371 1267381, overlap 1267367 1267371 1267381 TAATCTATCTTCTAA ATGACAAAAAAGGGATACC AAAT GGTATCCCTTTTTTGTTGA TTTATCTTTTTTTGA TERM 1866 1267371 - 1267410 + r 100 -18.2 -3.40983 | opp_overlap 1267371 1267381, overlap 1267370 1267367 1267381 AATCTATCTTCTAAA TGACAAAAAAGGGATACC AAAT GGTATCCCTTTTTTGTTG ATTTATCTTTTTTTG TERM 1867 1267410 - 1267371 - R 100 -13.8 -3.5594 | opp_overlap 1267371 1267370 1267367 1267381, overlap 1267381 AATCTATCTTCTAAA TGACAAAAAAGGGATACC AAAT GGTATCCCTTTTTTGTTG ATTTATCTTTTTTTG TERM 1868 1267381 - 1267400 + r 100 -12.2 -5.59655 | opp_overlap 1267371 1267381, overlap 1267371 1267370 1267367 CTAAATGACAAAAAA GGGATACC AAAT GGTATCCC TTTTTTGTTGATTTA TERM 1869 1267400 - 1267381 - R 100 -12.2 -5.42265 | opp_overlap 1267381 1267371 1267370 1267367, overlap 1267371 CTAAATGACAAAAAA GGGATACC AAAT GGTATCCC TTTTTTGTTGATTTA LSA1288 1267958 - 1267449 - | hypothetical protein LSA1289 1268105 - 1268299 + | hypothetical protein TERM 1870 1268297 - 1268337 + T 100 -18 -4.53439 | gap 1, opp_overlap 1268297 1268306, overlap 1268306 ATCGATATGTATCAA TAACAAAAAGACCTCCGAT CATT ATCGGAGGTCTTTT-GTTA TTTATTTACCTTTGG TERM 1871 1268337 - 1268297 - T 100 -18 -3.2056 | gap 1, opp_overlap 1268297 1268306, overlap 1268306 ATCGATATGTATCAA TAACAAAAAGACCTCCGAT CATT ATCGGAGGTCTTTT-GTTA TTTATTTACCTTTGG TERM 1872 1268329 - 1268306 - T 100 -15.4 -5.31855 | opp_overlap 1268297 1268306, overlap 1268297 TATCAATAACAAAAA GACCTCCGAT CATT ATCGGAGGTC TTTTGTTATTTATTT TERM 1873 1268306 - 1268329 + T 100 -15.4 -5.10765 | opp_overlap 1268306 1268297, overlap 1268297 TATCAATAACAAAAA GACCTCCGAT CATT ATCGGAGGTC TTTTGTTATTTATTT lepA 1270177 - 1268339 - | GTP-binding protein LepA TERM 1874 1268416 - 1268428 + g 76 -7.7 -4.15788 | CTTCCACTGAGCCCA CGGAT TTC ATCCG TTTCTTCCCAGCCTT TERM 1875 1269924 - 1269903 - G 75 -5.1 -4.80882 | opp_overlap 1269903 ACTTCATATGAAAAA TCGACATGC CCTG GCGTATCGA TTAAATGGAAAATAT TERM 1876 1270303 - 1270272 - R 74 -3.7 -5.15634 | GACGCCACTAAAAAA GACGACCACTTAA AATTAA TTTAGTGAGCGTC TTTAGCAACTATTTT LSA1291 1270455 - 1270312 - | hypothetical protein LSA1292 1270599 - 1270910 + | putative prophage protein TERM 1877 1270939 - 1270918 - f 81 -8.7 -4.05172 | opp_overlap 1270918, overlap 1270913 CAAATTAAAACACAA GCCTTAGTC TGAT GACTGAGGC TTTTTTAGTGATTCG TERM 1878 1270918 - 1270939 + F 100 -10.9 -5.2189 | opp_overlap 1270913 1270918 CAAATTAAAACACAA GCCTTAGTC TGAT GACTGAGGC TTTTTTAGTGATTCG LSA1293 1271015 - 1271566 + | hypothetical protein LSA1294 1271568 - 1272404 + | putative prophage nuclease precursor TERM 1879 1272414 - 1272435 + F 100 -9.5 -5.53436 | opp_overlap 1272414 GAATAAGCACATTAA GCAAAGTCT TTTG GGACTTTGC TTTTTTATATTGTCT TERM 1880 1272435 - 1272414 - f 73 -8.8 -3.35176 | opp_overlap 1272414 GAATAAGCACATTAA GCAAAGTC TTTTGG GACTTTGC TTTTTTATATTGTCT LSA1295 1272540 - 1273346 + | hypothetical protein LSA1296 1273470 - 1273835 + | integral membrane protein TERM 1881 1273846 - 1273869 + T 100 -10.4 -5.40072 | opp_overlap 1273844 1273849 CATAAGCAATTAATG TAACAGTCAC ACTG GTGGCTGTTA TTTTTTTGCAACAAA TERM 1882 1273888 - 1273921 + T 73 -5.4 -4.63218 | opp_overlap 1273888 TTTTGCAACAAAAAA GGCATCTAACAC CGTTACGGTA GTGTTAAATGCC TTTTATTAAGCCAAC TERM 1883 1273921 - 1273888 - T 100 -8.3 -5.4505 | opp_overlap 1273888 TTTTGCAACAAAAAA GGCATCTAACACC GTTACGGT AGTGTTAAATGCC TTTTATTAAGCCAAC TERM 1884 1274334 - 1274346 + T 73 -6.3 -4.48741 | opp_overlap 1274311 CCGTAACGGCCCCGA TATGC ATA GCATA TTTTATCATAAATTC LSA1297 1274836 - 1274378 - | hypothetical protein TERM 1885 1274652 - 1274632 - G 72 -9.7 -2.87405 | opp_overlap 1274632 AGACTAACAAGATGA TGACCGACG CAA CACCGGTCA GTTTATCATCTACCG TERM 1886 1274880 - 1274860 - R 81 -3.9 -5.45652 | opp_overlap 1274861, overlap 1274861 ACCTCCAATAAAAAA GGACCAGCA ATA CGCTGATCA CTTTTTAAACTTATT TERM 1887 1274879 - 1274861 - R 71 -7.4 -3.86307 | opp_overlap 1274861, overlap 1274860 CCTCCAATAAAAAAG GACCAGCA ATA CGCTGATC ACTTTTTAAACTTAT ack2 1276087 - 1274891 - | acetate kinase (acetokinase) LSA1299 1277119 - 1276109 - | putative adenine-specific DNA methyltransferase TERM 1888 1276527 - 1276512 - G 71 -4 -4.87786 | opp_overlap 1276501, overlap 1276501 1276524 TCAATTGGATAAAAA CCAATT GGTA AATCGG CAACCGCGATATCAA LSA1300 1277581 - 1277243 - | hypothetical protein LSA1301 1278005 - 1277544 - | hypothetical protein LSA1302 1278336 - 1278031 - | hypothetical protein LSA1303 1278727 - 1278323 - | hypothetical protein LSA1304 1279046 - 1278747 - | putative type II secretion/competence system, protein ComGC-like precursor LSA1305 1280050 - 1279043 - | putative type II secretion/competence system, protein comGB-like TERM 1889 1279526 - 1279516 - G 87 -8.2 -4.45664 | GTAATCGAACTAAAA CCGG TAA CCGG CGGTAAACCATAAAA LSA1306 1280933 - 1280043 - | putative type II secretion/competence system, protein ComGA-like TERM 1890 1281036 - 1281004 - R 100 -12.3 -5.75342 | opp_overlap 1281004 1281007 1281034, overlap 1281034 TTTTTGCAAAAAAAA TAACCTTAAACCAAC AAT ATTGGTTTAAAGTTA TTTAGAATAATATTA TERM 1891 1281004 - 1281036 + r 78 -9.4 -3.63782 | opp_overlap 1281004 1281034, overlap 1281007 1281034 TTTTTGCAAAAAAAA TAACCTTAAACCAA CAATA TTGGTTTAAAGTTA TTTAGAATAATATTA LSA1307 1281780 - 1281049 - | hypothetical protein LSA1308 1282371 - 1281871 - | hypothetical protein TERM 1892 1282331 - 1282317 - G 80 -5 -5.19275 | AGCTATAAAACAAAA TTGCCA TCA TGACAA GTGCCAATACTAAGA TERM 1893 1282662 - 1282642 - g 74 -6.1 -4.44355 | opp_overlap 1282659 GAAGTCCAAAAACAA GGCAACTCA GAA CAAGCTGCC AAATTAAATGGCATG LSA1309 1282468 - 1282842 + | hypothetical protein TERM 1894 1282853 - 1282877 + T 89 -5.9 -5.25803 | GTTAAAGACGCTTGC TATTTTAGC TGAAAGT GCTAAAATA TTTTTTGTAAGCGTT TERM 1895 1283020 - 1282978 - T 100 -15.1 -4.24413 | opp_overlap 1282983, overlap 1282983 TCCACTAACAAATAA TTAAAGGGCGTCAATAATG TTAGC CATTATTGACGCCCTTTTT ATGTCTTTAAACTTT TERM 1896 1283015 - 1282983 - T 100 -19.4 -4.20454 | opp_overlap 1282983, overlap 1282978 TAACAAATAATTAAA GGGCGTCAATAATG TTAGC CATTATTGACGCCC TTTTTATGTCTTTAA TERM 1897 1282983 - 1283015 + T 100 -19.4 -5.14985 | opp_overlap 1282978 1282983 TAACAAATAATTAAA GGGCGTCAATAATG TTAGC CATTATTGACGCCC TTTTTATGTCTTTAA LSA1310 1284163 - 1283072 - | hypothetical protein LSA1311 1284403 - 1284642 + | hypothetical protein TERM 1898 1284664 - 1284702 + T 100 -9.8 -5.44119 | gap 1, opp_overlap 1284664 CTTTCATCAAAAAAA CACCATCAATTCTGGAC AATTGC GTCCACA-TTGATGGTG TTTTTTTAGAATAAG TERM 1899 1284702 - 1284664 - T 100 -10.5 -5.52384 | gap 1, opp_overlap 1284664 CTTTCATCAAAAAAA CACCATCAATTCTGGACA ATTG CGTCCACA-TTGATGGTG TTTTTTTAGAATAAG LSA1312 1285721 - 1284708 - | integral membrane protein TERM 1900 1285138 - 1285121 - G 81 -11.3 -2.77899 | overlap 1285118 TGCCTTGATTAATCA TGGTCGC ACTG GCGACCA CTTGGCCCACAGATT TERM 1901 1285550 - 1285565 + g 71 -6.8 -4.17316 | gap 1 CAGAAAATTTCGTGC CCGCGGC TAA GCC-CGG TTGTTTTAACCAAGT LSA1313 1285831 - 1286658 + | LysR family transcriptional regulator TERM 1902 1287732 - 1287747 + G 78 -4 -5.19328 | AGCCGCCGGTATTCC GTTGAT CTTC ATCAGC TTTTTCTTCTCAAGT LSA1314 1286671 - 1287987 + | putative drug:Na(+) antiporter (drug efflux pump) TERM 1903 1288028 - 1287996 - T 100 -19.4 -4.8143 | opp_overlap 1287996 TGAATAATCTAAAAA GGGTAGGGACAAAA GTTAT TTTTGTCCCTACCC TTTTTCAATATTCTA TERM 1904 1287996 - 1288028 + T 100 -20.1 -4.76312 | opp_overlap 1287996 TGAATAATCTAAAAA GGGTAGGGACAAAAG TTA TTTTTGTCCCTACCC TTTTTCAATATTCTA LSA1315 1288862 - 1288041 - | putative lipase/esterase rluA3 1289801 - 1288899 - | pseudouridylate synthase, 23S rRNA-specific LSA1317 1289947 - 1290504 + | putative chromate reductase TERM 1905 1290521 - 1290541 + F 100 -8.3 -5.66684 | opp_overlap 1290521 TCCTAATTAATTCAA CCGTCGA TCAGTTT TCGACGG TTTTTTTGTCCATTC TERM 1906 1290630 - 1290673 + F 76 -7.8 -4.17048 | opp_overlap 1290630, overlap 1290633 GTCATTTTAGATACA TTTTATTAGTTTTTGTATCT ACGA AGATATAAAAACTAATATAC TTATTTTGAGGGAAA TERM 1907 1290633 - 1290670 + F 100 -13.9 -3.10579 | opp_overlap 1290630, overlap 1290630 ATTTTAGATACATTT TATTAGTTTTTGTATCT ACGA AGATATAAAAACTAATA TACTTATTTTGAGGG LSA1318 1290697 - 1290999 + | integral membrane protein TERM 1908 1291015 - 1291049 + T 100 -13.8 -4.94902 | opp_overlap 1291015 ATAGCCAATTAAAAA GCCCTTCTAAAATC AGATTTC GATTTTAGAGGGGC TTTTTCTAATCATTA TERM 1909 1291049 - 1291015 - T 100 -12.3 -4.89009 | opp_overlap 1291015 ATAGCCAATTAAAAA GCCCTTCTAAAATCA GATTT CGATTTTAGAGGGGC TTTTTCTAATCATTA LSA1319 1291238 - 1291062 - | hypothetical protein LSA1320 1291936 - 1291238 - | putative NADPH-quinone oxidoreductase glnA 1293339 - 1291996 - | glutamate--ammonia ligase (glutamine synthetase) glnR 1293726 - 1293355 - | glutamine synthetase transcriptional regulator TERM 1910 1293820 - 1293840 + r 89 -10.5 -4.12456 | opp_overlap 1293820 AATGCCATAAAAAAA GGTAAACCG TTT TGGTTTACC TTTTAAAACTAGTCT TERM 1911 1293840 - 1293820 - R 100 -9.8 -5.63504 | opp_overlap 1293820 AATGCCATAAAAAAA GGTAAACC GTTTT GGTTTACC TTTTAAAACTAGTCT tag2 1294394 - 1293849 - | 3-methyl-adenine DNA glycosylase I LSA1324 1295251 - 1294388 - | XRE family DNA-binding protein TERM 1912 1294690 - 1294704 + g 78 -10 -3.54543 | GTCCCCCAATCCCCG CTGCTG GTC CAGCAG TTTGGAAGACTGCAT TERM 1913 1295377 - 1295416 + r 70 -6.5 -4.04587 | opp_overlap 1295381, overlap 1295375 1295378 CGCTTTACATACAAA AAAAGCGGTGAATCAAA CGTCAA TTTGATTCACCGCTACC TGTTTATTTTTCAAA TERM 1914 1295378 - 1295415 + r 76 -10 -3.01668 | opp_overlap 1295381, overlap 1295377 1295375 GCTTTACATACAAAA AAAGCGGTGAATCAAA CGTCAA TTTGATTCACCGCTAC CTGTTTATTTTTCAA TERM 1915 1295412 - 1295381 - R 100 -16.8 -5.76633 | opp_overlap 1295378 1295377 1295375 TTACATACAAAAAAA GCGGTGAATCAAAC GTCA ATTTGATTCACCGC TACCTGTTTATTTTT LSA1325 1296676 - 1295420 - | hypothetical protein TERM 1916 1296596 - 1296633 + g 75 -7.1 -4.29396 | gap 1, opp_overlap 1296593 TTGTTCATCTAAGGC TTGAAGCCG-TGGCGC AATTTGA GCGTCAACAGCTTCAA TTTTGGTCCGTAATT miaA 1297628 - 1296696 - | tRNA isopentenyltransferase (tRNA delta(2)-isopentenylpyrophosphate transferase) (IPP transferase) TERM 1917 1297602 - 1297614 + g 80 -2.7 -5.47846 | opp_overlap 1297586 ACCCGTAGGCCCTAC GATGA CAA TTATC TTTTCTTTTTTCATT LSA1327 1297727 - 1297906 + | extracellular peptide precursor TERM 1918 1297927 - 1297959 + T 81 -4.2 -5.31275 | gap 1 TAAAGATGATCACAA GACGCTGCCCTAC TTTTTTTT GTAGG-TGGCGTC TTTTTTGTGCTGAAA TERM 1919 1298165 - 1298147 - T 72 -8.2 -3.5393 | opp_overlap 1298147 1298132 1298150, overlap 1298148 ACTACGTGTGCCAAA CTAGCGAT TAC ATCGCTAA TTCGTCACCCTAGGT TERM 1920 1298164 - 1298148 - T 72 -9.5 -2.72144 | opp_overlap 1298147 1298132 1298150, overlap 1298147 CTACGTGTGCCAAAC TAGCGAT TAC ATCGCTA ATTCGTCACCCTAGG TERM 1921 1298230 - 1298270 + T 88 -5.4 -5.59357 | opp_overlap 1298232, overlap 1298232 TCTTTTTCATATAAA AACCCAAAAGTCTGCTGT TTTTC ACTGGCGACTTTTGGGTC TTTTTTTAATCTACT TERM 1922 1298268 - 1298232 - T 89 -8 -4.96848 | opp_overlap 1298230 1298232 TTTTTCATATAAAAA CCCAAAAGTCTGCTGT TTTTC ACTGGCGACTTTTGGG TCTTTTTTTAATCTA TERM 1923 1298232 - 1298268 + T 82 -8 -4.42962 | opp_overlap 1298232, overlap 1298230 TTTTTCATATAAAAA CCCAAAAGTCTGCTGT TTTTC ACTGGCGACTTTTGGG TCTTTTTTTAATCTA LSA1328 1298694 - 1298281 - | putative rhodanese-sulfurtransferase glk 1299690 - 1298719 - | glucokinase LSA1330 1299920 - 1299687 - | hypothetical protein LSA1331 1300618 - 1299953 - | integral membrane protein TERM 1924 1300003 - 1300035 + g 79 -8.6 -4.11692 | gap 1, opp_overlap 1300003 GGGTAATGACGTAAA TTAACCCACT-AACC ACAC GGTTTAGCGGGTTAA TTTTCCCGATACGTG TERM 1925 1300035 - 1300003 - G 84 -10.8 -3.71527 | gap 1, opp_overlap 1300003 GGGTAATGACGTAAA TTAACCCACT-AACC ACAC GGTTTAGCGGGTTAA TTTTCCCGATACGTG fthC 1301173 - 1300631 - | 5-formyltetrahydrofolate cyclo-ligase TERM 1926 1301216 - 1301197 - R 100 -10.6 -5.7946 | opp_overlap 1301197 CTCCTAACAAAAAAA GCCCGGGC AAGC GCCCCGGC TTTTTTTATGCGTCA TERM 1927 1301197 - 1301216 + r 100 -10.6 -5.64274 | opp_overlap 1301197 CTCCTAACAAAAAAA GCCCGGGC AAGC GCCCCGGC TTTTTTTATGCGTCA rpmG 1301381 - 1301232 - | 50S ribosomal protein L33 TERM 1928 1301486 - 1301502 + r 73 -6.7 -4.18676 | opp_overlap 1301488 AAGGTTAATTCGCAA TATTTCA TTT TGAAATA TTATTTAATTTATAG pbp2B2 1303604 - 1301490 - | bifuntional dimerisation/transpeptidase penicillin-binding protein 2B TERM 1929 1302251 - 1302235 - G 76 -9.5 -3.42395 | overlap 1302233 TGCATCATGTAAATA TTGGAAG AAA CTTCCAA AGCCGATTGTGCTGA TERM 1930 1302556 - 1302575 + g 73 -10 -2.92792 | opp_overlap 1302555, overlap 1302559 1302560 1302568 GCACCATCAGAGTAT GTCGTTGC GCCA GCAGCGAC TGCTTTGGCGTAAAT TERM 1931 1303805 - 1303827 + H 75 -9.2 -3.16039 | TACTGTTATATTTTA CAGCTTTTCC GCA GTAAAAGCTG TTCATCAAACTAATT LSA1335 1303874 - 1306489 + | hypothetical protein TERM 1932 1306519 - 1306494 - T 100 -14.1 -5.06451 | opp_overlap 1306494 GATTATTTTAAAAAA GACTCAGGACA ACAT TGCCCTGAGTC TTTTTTACTAGCCTA TERM 1933 1306494 - 1306519 + T 100 -11.9 -5.15634 | opp_overlap 1306494 GATTATTTTAAAAAA GACTCAGGACA ACAT TGCCCTGAGTC TTTTTTACTAGCCTA LSA1336 1308769 - 1306655 - | putative Na(+)/H(+) antiporter murB 1309740 - 1308829 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1934 1308955 - 1308926 - G 70 -8 -3.69434 | gap 1, overlap 1308929 1308932 GCAATTAACGTTAAA TAATCAGTGGCAG TTGCG CCGCCAC-GATTA ACAATAAAACCAGCG TERM 1935 1309638 - 1309649 + g 75 -7.2 -4.26344 | opp_overlap 1309615 1309637, overlap 1309615 AGGCTAATAAATCAG CCGG ACCA CCGG TTTTGGTGAAGGTAT TERM 1936 1310509 - 1310498 - g 70 -7.2 -3.78934 | overlap 1310495 TGCGCGTGATAACAA CGCC GGTT GGCG GATTGACTATTTCAT exoA 1309869 - 1310633 + | exodeoxyribonuclease III dnaQ 1310669 - 1311205 + | DNA-directed DNA polymerase III, epsilon subunit TERM 1937 1311365 - 1311401 + T 100 -19.7 -4.1711 | opp_overlap 1311365 ATCCTACCAACAAAA GAGGCTATCAGTAACTG AAA TGGTTACTGATAGCCTC TTTATTAGCAATGGT TERM 1938 1311401 - 1311365 - T 100 -18.3 -4.71828 | opp_overlap 1311365 ATCCTACCAACAAAA GAGGCTATCAGTAAC TGAAATG GTTACTGATAGCCTC TTTATTAGCAATGGT LSA1340 1312448 - 1311540 - | putative transport protein LSA1341 1312987 - 1312460 - | GNAT family N-acetyltransferase TERM 1939 1312961 - 1312935 - G 75 -7.3 -4.38412 | overlap 1312932 AAAAAACATAAATAA GCCCGTGCA TCCGTTACC TGCACAGGC CGAATTACTAAAGAT LSA1342 1313441 - 1312977 - | hypothetical protein TERM 1940 1313584 - 1313535 - R 100 -13.9 -4.42765 | opp_overlap 1313537 1313542, overlap 1313537 1313542 TTCCAAAAAAGCAAA CATTAAAGAGGCTTAAGATAACG TCAC CATTATCCTAAGCCTCTTTGATT AAATGCTAAGACACT TERM 1941 1313537 - 1313582 + r 100 -14.3 -3.09516 | opp_overlap 1313535 1313537 1313542, overlap 1313542 CCAAAAAAGCAAACA TTAAAGAGGCTTAAGATAACG TCAC CATTATCCTAAGCCTCTTTGA TTAAATGCTAAGACA TERM 1942 1313582 - 1313537 - R 100 -16.5 -3.8049 | opp_overlap 1313537 1313542, overlap 1313535 1313542 CCAAAAAAGCAAACA TTAAAGAGGCTTAAGATAACG TCAC CATTATCCTAAGCCTCTTTGA TTAAATGCTAAGACA TERM 1943 1313577 - 1313542 - R 100 -16.4 -4.05229 | opp_overlap 1313537 1313542, overlap 1313537 1313535 AAAGCAAACATTAAA GAGGCTTAAGATAACG TCAC CATTATCCTAAGCCTC TTTGATTAAATGCTA TERM 1944 1313542 - 1313577 + r 93 -12 -3.94002 | opp_overlap 1313542 1313537 1313535, overlap 1313537 AAAGCAAACATTAAA GAGGCTTAAGATAACG TCAC CATTATCCTAAGCCTC TTTGATTAAATGCTA eutD 1314586 - 1313600 - | phosphotransacetylase ung 1315366 - 1314677 - | uracil-DNA glycosylase TERM 1945 1314733 - 1314718 - G 78 -10.4 -3.35867 | opp_overlap 1314717 1314715 1314718 GTAATTGCCAATTAA TGGGCG TCAT CGCCCA CTGTTTTAACTGCTG TERM 1946 1314718 - 1314733 + g 75 -10.4 -2.81922 | opp_overlap 1314718, overlap 1314717 1314715 GTAATTGCCAATTAA TGGGCG TCAT CGCCCA CTGTTTTAACTGCTG LSA1345 1315482 - 1316369 + | haloacid dehalogenase family hydrolase TERM 1947 1316485 - 1316495 + G 71 -6.8 -4.2349 | GCAGTCGCGGCTTAC GCCA AGA TGGC TTTTCACTCTACCGG LSA1346 1316376 - 1316894 + | hypothetical protein TERM 1948 1316903 - 1316923 + F 100 -9 -5.4505 | opp_overlap 1316900 1316896 1316903 TAGTTAAACAAATGA GTCACCGT CAAAA GCGGTGAC TTTTTTGTTGCCCAA LSA1347 1317023 - 1317754 + | integral membrane protein TERM 1949 1317809 - 1317784 - T 100 -13.5 -5.17576 | opp_overlap 1317784 CACTAACCTAAAAAA CGTTATTAGCA TTCG TGCTAATAACG TTTTTTAGGTTAGTA TERM 1950 1317784 - 1317809 + T 100 -13.5 -5.17576 | opp_overlap 1317784 CACTAACCTAAAAAA CGTTATTAGCA TTCG TGCTAATAACG TTTTTTAGGTTAGTA LSA1348 1318631 - 1318158 - | extracellular protein precursor TERM 1951 1318771 - 1318730 - R 100 -16.1 -3.78953 | opp_overlap 1318736 1318738, overlap 1318736 ATCGCCATGATTAAA GTAAAAGACTCGGACAAAC ATAA ATTTGTCCGAGCCTTTTTC TAAAATTTTAAATTA TERM 1952 1318736 - 1318765 + r 100 -10.8 -4.90296 | opp_overlap 1318730 1318736, overlap 1318738 ATGATTAAAGTAAAA GACTCGGACAAA CATAAA TTTGTCCGAGCC TTTTTCTAAAATTTT TERM 1953 1318765 - 1318736 - R 100 -13.7 -4.59376 | opp_overlap 1318736 1318738, overlap 1318730 ATGATTAAAGTAAAA GACTCGGACAAAC ATAA ATTTGTCCGAGCC TTTTTCTAAAATTTT TERM 1954 1318738 - 1318763 + r 83 -12 -2.70446 | opp_overlap 1318736 1318730, overlap 1318736 GATTAAAGTAAAAGA CTCGGACAAA CATAAA TTTGTCCGAG CCTTTTTCTAAAATT LSA1349 1319347 - 1318784 - | GNAT family N-acetyltransferase LSA1350 1320081 - 1319410 - | hypothetical protein LSA1351 1321512 - 1320085 - | transcriptional regulator TERM 1955 1320291 - 1320281 - G 71 -2.4 -5.19879 | CCCCAAATATAAAAA CCGC CTT GCGC TACACTGAACTGCCA TERM 1956 1320893 - 1320871 - G 77 -6.2 -4.65895 | overlap 1320874 TGCTTCATGGAAAAA CGATGGCGAT TCA ACCGCCACTG CATCCCCCGGTACCA TERM 1957 1320890 - 1320874 - G 71 -8.7 -3.26405 | overlap 1320871 TTCATGGAAAAACGA TGGCGAT TCA ACCGCCA CTGCATCCCCCGGTA TERM 1958 1321246 - 1321257 + g 72 -7.2 -3.9461 | opp_overlap 1321245 1321246, overlap 1321245 CGTATGCCAATTAAC GCGC CGCT GCGC TTGTTGTTCACCAGC LSA1352 1321625 - 1322419 + | putative phosphomethylpyrimidine kinase LSA1353 1322409 - 1322909 + | integral membrane protein LSA1354 1322921 - 1323472 + | hypothetical protein TERM 1959 1323512 - 1323487 - T 100 -12 -5.22943 | opp_overlap 1323487 AGCAAATCTAAAAAA GGCATTCAGA AATTAA TCTGAATGCC TTTTTATATTCGTCA TERM 1960 1323487 - 1323512 + T 100 -12 -5.1244 | opp_overlap 1323487 AGCAAATCTAAAAAA GGCATTCAGA AATTAA TCTGAATGCC TTTTTATATTCGTCA TERM 1961 1323645 - 1323627 - T 72 -8.2 -3.58522 | opp_overlap 1323630 ACGACGATTGTCAAA TCAGCGAT TTC ATCGCTAA TTCACCACTCTATGT glmS 1325763 - 1323949 - | D-fructose-6-phosphate amidotransferase LSA1356 1325960 - 1326295 + | integral membrane protein TERM 1962 1326348 - 1326315 - T 100 -19.9 -5.65177 | opp_overlap 1326315 ATAGGCACAAAAAAA GAGCGTAAGACAAAA TTAC TTTTGTCTTACGCTC TTTTTGAATCGTCGA TERM 1963 1326315 - 1326348 + T 100 -19.9 -4.68593 | opp_overlap 1326315 ATAGGCACAAAAAAA GAGCGTAAGACAAAA TTAC TTTTGTCTTACGCTC TTTTTGAATCGTCGA TERM 1964 1326452 - 1326416 - T 77 -10.3 -2.90075 | opp_overlap 1326416 1326425 1326428 1326440, overlap 1326425 CTGCGCTTAACGACA TCTGCCAAATCAGCGAT TTT ATCGCTAATTCGTCAAA TTAGGTTAATGCTCA TERM 1965 1326443 - 1326425 - T 72 -8.2 -3.56821 | opp_overlap 1326425 1326416 1326428 1326440, overlap 1326416 ACGACATCTGCCAAA TCAGCGAT TTT ATCGCTAA TTCGTCAAATTAGGT TERM 1966 1326537 - 1326581 + T 75 -9.6 -3.17794 | opp_overlap 1326542, overlap 1326542 AACTTCCGCTTAATC TAAAATTGCCAGTAATCC TAAAACCCT GAATTACTGGCAATTTTG TCTTAATGCTCAGTT TERM 1967 1326542 - 1326576 + T 81 -7.3 -4.71186 | opp_overlap 1326542, overlap 1326537 CCGCTTAATCTAAAA TTGCCAGTAATCC TAAAACCCT GAATTACTGGCAA TTTTGTCTTAATGCT TERM 1968 1326576 - 1326542 - T 86 -9.5 -4.27316 | opp_overlap 1326542 1326537 CCGCTTAATCTAAAA TTGCCAGTAATCC TAAAACCCT GAATTACTGGCAA TTTTGTCTTAATGCT glmM 1327980 - 1326628 - | phosphoglucosamine mutase (glucosamine 6-P mutase) LSA1358 1329136 - 1328015 - | hypothetical protein LSA1359 1330014 - 1329163 - | hypothetical protein potD 1331142 - 1330075 - | spermidine/putrescine ABC transporter substrate-binding protein TERM 1969 1330999 - 1331019 + g 71 -9.7 -2.58579 | opp_overlap 1330996 1330999, overlap 1330998 CTTCTTAATTAATGA TGGGTCGAT ATA ATCGCCCCA ATTATAGAGGGTTAA TERM 1970 1331019 - 1330999 - G 72 -9.7 -2.84098 | opp_overlap 1330999 1330998, overlap 1330996 CTTCTTAATTAATGA TGGGTCGAT ATA ATCGCCCCA ATTATAGAGGGTTAA potC 1331963 - 1331139 - | spermidine/putrescine ABC transporter transmembrane protein potB 1332775 - 1331960 - | spermidine/putrescine ABC transporter transmembrane protein potA 1333875 - 1332784 - | spermidine/putrescine ABC transporter ATP-binding protein TERM 1971 1333225 - 1333215 - G 71 -8.2 -3.46285 | opp_overlap 1333215 1333214 CATCGTAAATATCAA CGGG GGT CCCG CTTTGAAGGACATTC TERM 1972 1334214 - 1334230 + G 73 -5.1 -4.63486 | overlap 1334215 CTTAAAAACTATCCC GCAACAC CCG GTGTTGA TTTTGTTGGGACCGT LSA1364 1334031 - 1335026 + | putative zinc-containing alcohol dehydrogenase (oxidoreductase) TERM 1973 1335067 - 1335031 - T 100 -13.1 -5.27779 | opp_overlap 1335031 CTGAACATTAAAAAA GTGATTCTACTCGTCCA TAA CGGATGCGTAGAATCAC TTTTTGGTTAGACTT TERM 1974 1335031 - 1335067 + T 100 -14.6 -4.87893 | opp_overlap 1335031 CTGAACATTAAAAAA GTGATTCTACTCGTCC ATAAC GGATGCGTAGAATCAC TTTTTGGTTAGACTT LSA1365 1335299 - 1335081 - | hypothetical protein TERM 1975 1335145 - 1335158 + g 84 -5.3 -5.29846 | TCAGCGACTTTATCC TTAGC TTCC GCTAA TTTTTCTTTGGACTT LSA1366 1336039 - 1335374 - | ABC transporter ATP-binding protein LSA1367 1337099 - 1336041 - | ABC transporter permease/transmembrane protein TERM 1976 1336712 - 1336734 + g 86 -11.3 -3.35992 | CAACAGCCACTTCAC GGGTCGCTT TTGGT AAGCGGCCC TTCGTTAACGTCGGT TERM 1977 1337215 - 1337184 - R 100 -10.2 -5.2189 | opp_overlap 1337184, overlap 1337186 CTAAGTATTAAAAAA GGCCTGGGACAAAA GTAA TTTTGTCTCAGGTC TTTTTTAACATCAAT TERM 1978 1337184 - 1337215 + r 100 -14.6 -5.05782 | opp_overlap 1337184 1337186 CTAAGTATTAAAAAA GGCCTGGGACAAAA GTAA TTTTGTCTCAGGTC TTTTTTAACATCAAT TERM 1979 1337213 - 1337186 - R 82 -11.4 -2.82145 | opp_overlap 1337184, overlap 1337184 AAGTATTAAAAAAGG CCTGGGACAAAA GTAA TTTTGTCTCAGG TCTTTTTTAACATCA LSA1368 1337526 - 1337233 - | hypothetical protein LSA1369 1338151 - 1337552 - | two-component system, response regulator LSA1370 1339250 - 1338186 - | two-component system, sensor histidine kinase TERM 1980 1339204 - 1339179 - G 87 -6.1 -5.18561 | GAAATACGCAAAAAA TAACGCCACTG AAAA CAGAAGCGTCA ACAATCCGGTACTAA LSA1371 1340005 - 1339247 - | hypothetical protein TERM 1981 1340142 - 1340160 + r 72 -8.2 -3.55444 | opp_overlap 1340145, overlap 1340145 ACACAGCTCGGTGAA TAACTGCT GCA AGCAGTTG TTTGACGAGTGACGC TERM 1982 1340145 - 1340157 + r 74 -7.7 -3.91716 | opp_overlap 1340145, overlap 1340142 CAGCTCGGTGAATAA CTGCT GCA AGCAG TTGTTTGACGAGTGA TERM 1983 1340256 - 1340292 + r 82 -10.3 -3.53012 | opp_overlap 1340256, overlap 1340265 TGAGCATTTGCAGAA CTTAGCGAATTGGTGAT GAA ATCACCGGTTTGATAAG TTTAGCAAAGCACAG TERM 1984 1340502 - 1340538 + r 87 -11.7 -3.53012 | opp_overlap 1340502, overlap 1340511 TGAGCATTTGCAGAA CTTGGCGAATTGGTGAT GAA ATCACCGGTTTGACAAG TTTAGCAAAGCGCAG TERM 1985 1340639 - 1340649 + r 70 -6.8 -4.0274 | opp_overlap 1340628 1340639, overlap 1340636 TAGAGTGACGAATAA TCGC ACG GCGA TTGTTTGGTGCTCAG TERM 1986 1340757 - 1340727 - R 100 -14.1 -5.63103 | opp_overlap 1340727 1340729 GTTCAACTAAAAAAA GAGCCGGGACAAA TTAAC TTTGTCCCGACCC TTTTAGTTAGCAGGT TERM 1987 1340727 - 1340757 + r 91 -9.7 -4.41047 | opp_overlap 1340727, overlap 1340729 GTTCAACTAAAAAAA GAGCCGGGACAAA TTAAC TTTGTCCCGACCC TTTTAGTTAGCAGGT TERM 1988 1340729 - 1340755 + r 77 -10.9 -2.54166 | opp_overlap 1340727, overlap 1340727 TCAACTAAAAAAAGA GCCGGGACAAA TTAAC TTTGTCCCGAC CCTTTTAGTTAGCAG TERM 1989 1340855 - 1340821 - R 93 -12.2 -4.05446 | opp_overlap 1340821 1340814 CCGGTTAACTACAAA CCGGGAACCATGGC CAAGTGT GCCATAATCCCCGG TTTTAGGTTAATCCT greA 1341499 - 1341026 - | transcription elongation factor GreA udk 1342156 - 1341521 - | uridine kinase TERM 1990 1342222 - 1342195 - R 100 -16.4 -2.98823 | opp_overlap 1342195 1342198, overlap 1342198 CTTTTTGGACAGACA GAAGTCGACCCC GCTT GAGGTCGACTTC TATGATACATTACTA TERM 1991 1342195 - 1342222 + r 100 -14.2 -2.83409 | opp_overlap 1342195 1342198, overlap 1342198 CTTTTTGGACAGACA GAAGTCGACCCC GCTT GAGGTCGACTTC TATGATACATTACTA TERM 1992 1342198 - 1342219 + r 80 -10.1 -3.56161 | opp_overlap 1342195 1342198, overlap 1342195 TTTGGACAGACAGAA GTCGACCCC GCTT GAGGTCGAC TTCTATGATACATTA TERM 1993 1342219 - 1342198 - R 90 -12.3 -3.64198 | opp_overlap 1342198 1342195, overlap 1342195 TTTGGACAGACAGAA GTCGACCCC GCTT GAGGTCGAC TTCTATGATACATTA LSA1374 1343386 - 1342235 - | hypothetical protein pheT 1345892 - 1343472 - | phenylalanyl-tRNA synthetase subunit beta TERM 1994 1344377 - 1344387 + g 91 -8.2 -4.73635 | GTGTATGCCGTGTTC GGCG AAG CGCC TTTTGTTCGGTTGTC pheS 1346942 - 1345896 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 1995 1347000 - 1346976 - R 100 -7.1 -5.7946 | TTGCCAACAAAAAAA GCCCCGTCC TCAAAAG GGACGAAGC TTCGCGGTACCACCC LSA1378 1347574 - 1347218 - | hypothetical protein TERM 1996 1347634 - 1347618 - R 84 -8 -4.67011 | overlap 1347630 AAGTGTACTCAAAAA GGTTGC AAAAA GCAACC TTGAGGATTGGGCAT LSA1379 1348165 - 1347653 - | putative metal-dependent phosphohydrolase LSA1380 1349040 - 1348279 - | putative tRNA/rRNA methyltransferase TERM 1997 1348663 - 1348645 - G 75 -8.8 -3.60006 | overlap 1348637 AACCACACCGGCAAA GCCAGCAG CAT CTGCTGTC CGAATCATCGTGCCG LSA1381 1349170 - 1349448 + | putative acylphosphatase TERM 1998 1349548 - 1349526 - g 74 -6.2 -4.49644 | overlap 1349527 1349538 ATGAAAAATTCAAAA CGCTTCGCAA CAC TTGCGATGCT AGCAATGACCGTTAC TERM 1999 1349547 - 1349527 - g 76 -9.7 -3.28159 | overlap 1349526 1349538 TGAAAAATTCAAAAC GCTTCGCAA CAC TTGCGATGC TAGCAATGACCGTTA TERM 2000 1350397 - 1350378 - g 78 -4.2 -5.14965 | overlap 1350379 ATGTTCACCAAAAAA GCAGCTGC TAAA GCAACTGA AACACCTGTGACACC TERM 2001 1350396 - 1350379 - g 70 -7.7 -3.68256 | overlap 1350378 TGTTCACCAAAAAAG CAGCTGC TAAA GCAACTG AAACACCTGTGACAC oxaA1 1349511 - 1350500 + | membrane protein chaperone oxaA TERM 2002 1350554 - 1350510 - T 100 -24.7 -3.64357 | opp_overlap 1350516, overlap 1350516 GCATAATTAGAAATA CTAAAAGAGGCTCAGACAAAA TAA TTTTGTCTGAGCCTCTTTTTG ATATCCGAATATTGA TERM 2003 1350548 - 1350516 - T 100 -22.3 -4.53036 | opp_overlap 1350516, overlap 1350510 TTAGAAATACTAAAA GAGGCTCAGACAAAA TAA TTTTGTCTGAGCCTC TTTTTGATATCCGAA TERM 2004 1350516 - 1350548 + T 100 -22.3 -4.8048 | opp_overlap 1350516 1350510 TTAGAAATACTAAAA GAGGCTCAGACAAAA TAA TTTTGTCTGAGCCTC TTTTTGATATCCGAA TERM 2005 1350651 - 1350615 - T 72 -8.1 -3.53012 | overlap 1350624 CTGTGCTTTGCTAAA CTTATCAAACCGGTGAT TTT ATCACCAATTCGCCAAG TTCTGCAAGTGCTCA LSA1383 1352202 - 1350697 - | two-component system, sensor histidine kinase LSA1384 1352885 - 1352199 - | two-component system, response regulator TERM 2006 1353085 - 1353131 + r 90 -12.6 -3.18199 | opp_overlap 1353094, overlap 1353094 GCAATTGGTAACGCC TCAAAAAAATCCAGACGAAA ATGAGGC TTTCGTCTGGATTCTTTAGA TTCGATTAAAAATTA TERM 2007 1353094 - 1353122 + r 93 -11.9 -4.01381 | opp_overlap 1353094, overlap 1353085 AACGCCTCAAAAAAA TCCAGACGAAA ATGAGGC TTTCGTCTGGA TTCTTTAGATTCGAT TERM 2008 1353122 - 1353094 - R 100 -12.6 -5.41746 | opp_overlap 1353094 1353085 AACGCCTCAAAAAAA TCCAGACGAAAA TGAGG CTTTCGTCTGGA TTCTTTAGATTCGAT gndA 1354565 - 1353144 - | 6-phosphogluconate dehydrogenase TERM 2009 1354306 - 1354280 - G 73 -6 -4.46615 | opp_overlap 1354279 1354282, overlap 1354282 CACCATCAATTAAAA TGTCACCTTTAT CTA ATAAAGGTAATA ATTCGTTGATGACGG TERM 2010 1354742 - 1354721 - R 91 -4.4 -5.81032 | opp_overlap 1354720 1354715 1354712 1354709 1354721 TAAGTGCAAAAAAAA GACGCC CGTCTTAATC GGCGTC GTTTTCTTGTGCTTC LSA1386 1355291 - 1354731 - | hypothetical protein LSA1387 1356460 - 1355285 - | hypothetical protein LSA1388 1357200 - 1356469 - | putative methyltransferase TERM 2011 1356627 - 1356642 + g 70 -7.6 -3.71848 | GTAATTCGTTTAATT CTTGGT AACC ACCAAG TTGTTCGTCCCAAAC LSA1389 1357556 - 1357197 - | hypothetical protein LSA1390 1358171 - 1357569 - | putative metal-dependent phosphohydrolase nadD 1358811 - 1358164 - | nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase) LSA1392 1359144 - 1358827 - | hypothetical protein LSA1393 1360303 - 1359167 - | GTP-binding protein YqeH TERM 2012 1359881 - 1359895 + g 73 -5.6 -4.44608 | opp_overlap 1359881, overlap 1359860 1359878 TTCAATTGGATGTAA GCCATG TTC CTTGGC TTCTTTTTGAATCCA LSA1394 1360826 - 1360296 - | haloacid dehalogenase family hydrolase TERM 2013 1361396 - 1361342 - g 80 -6.5 -4.78572 | opp_overlap 1361342 1361357 1361395, overlap 1361353 CTTCAACCAACAAAA TCATTCGCAA-ACCTGTCAGCCTCAGC ATC GCTGAAGCTG-CTGGTCTCGCAAGTGC TGGTATTACCGCTTA TERM 2014 1361384 - 1361353 - g 90 -11.6 -3.60431 | gap 1, opp_overlap 1361342 1361357, overlap 1361342 AAAATCATTCGCAAA CCTGTCAGCCTCAGC ATC GCTGAAGCTG-CTGG TCTCGCAAGTGCTGG TERM 2015 1361660 - 1361633 - g 100 -10.6 -4.44046 | GTCACTTTAAACAAA CGGCCAAGATTG CTGT CAACCTCAGCCG CGATCCAAAATCAAC LSA1395 1361023 - 1361958 + | putative zinc-containing alcohol dehydrogenase (oxidoreductase) TERM 2016 1361982 - 1362016 + T 100 -13 -5.31545 | opp_overlap 1361982 CAATTTATAAAGAAA GAGTCTCGAACAAAAC GAA GTTTTGTCCCAGACTC TTTTTTGGTCTTATT TERM 2017 1362016 - 1361982 - T 100 -15.2 -4.59089 | opp_overlap 1361982 CAATTTATAAAGAAA GAGTCTCGAACAAAAC GAA GTTTTGTCCCAGACTC TTTTTTGGTCTTATT rplT 1362393 - 1362034 - | 50S ribosomal protein L20 rpmI 1362678 - 1362478 - | 50S ribosomal protein L35 infC 1363215 - 1362712 - | translation initiation factor IF-3 TERM 2018 1363308 - 1363285 - R 100 -8.8 -5.58074 | opp_overlap 1363284 TAAGCACCAAAAAAA CGGCCCCTTC AACA GAAAGGCCCG CTATTCGATAACTTA loxL2 1364576 - 1363470 - | L-lactate oxidase TERM 2019 1364700 - 1364669 - R 100 -14.7 -5.19916 | opp_overlap 1364669 AAAAGACGTAAAAAA GGCGTTAAATCAA AATAAA TTGATTTAACGCC TTTTTAAGGATGCTA TERM 2020 1364669 - 1364700 + r 100 -14.7 -4.60487 | opp_overlap 1364669 AAAAGACGTAAAAAA GGCGTTAAATCAA AATAAA TTGATTTAACGCC TTTTTAAGGATGCTA TERM 2021 1364822 - 1364803 - R 88 -10.8 -3.76224 | opp_overlap 1364803 1364806, overlap 1364806 GCGTCACCTATCAAA TAAGCGGT AAAT ACCGCTTA TTCGCTAGGCTGTGC TERM 2022 1364803 - 1364822 + r 79 -10.8 -3.07443 | opp_overlap 1364803 1364806, overlap 1364806 GCGTCACCTATCAAA TAAGCGGT AAAT ACCGCTTA TTCGCTAGGCTGTGC TERM 2023 1364819 - 1364806 - R 79 -8.1 -4.015 | opp_overlap 1364803 1364806, overlap 1364803 TCACCTATCAAATAA GCGGT AAAT ACCGC TTATTCGCTAGGCTG TERM 2024 1364806 - 1364819 + r 74 -8.1 -3.68073 | opp_overlap 1364806 1364803, overlap 1364803 TCACCTATCAAATAA GCGGT AAAT ACCGC TTATTCGCTAGGCTG thrS 1366842 - 1364872 - | threonyl-tRNA synthetase TERM 2025 1365138 - 1365148 + g 73 -5.4 -4.63527 | CGCGTTTGATCATTT CATC TTT GATG TTTTTAGCGTAATCA TERM 2026 1366707 - 1366686 - G 72 -7.3 -4.07568 | CCCCGTCTTCCAAAA GTGGTTGTT GTAA ATCAACCAC TTCACCGTTAAATTT TERM 2027 1366921 - 1366886 - R 100 -19.2 -5.95946 | opp_overlap 1366884 1366883 TCAACAATAAAAAAA GTCCCTGAGACGCATA CAAA TATGCACCTCAGGGAC GAATTGATTTCGCGG dnaI 1368080 - 1367154 - | primosomal protein DnaI dnaB 1369459 - 1368080 - | chromosome replication initiation/membrane attachment protein B TERM 2028 1369349 - 1369321 - G 100 -8.2 -4.77165 | GGCTCCATAACAAAA GATAGAGACTGT ACGCA ACAGCCCCCATC AGTGGTTGGTATAAA LSA1403 1369950 - 1369477 - | transcriptional regulator NrdR TERM 2029 1370219 - 1370237 + r 74 -8.2 -3.65902 | opp_overlap 1370222, overlap 1370222 GCAGCGTTAGGCGAA TAACCGAT GCA ATCGGTTG TTTGACTAACATCGC TERM 2030 1370234 - 1370222 - R 72 -7.7 -3.65046 | opp_overlap 1370219 1370222 GCGTTAGGCGAATAA CCGAT GCA ATCGG TTGTTTGACTAACAT TERM 2031 1370222 - 1370234 + r 74 -7.7 -3.96483 | opp_overlap 1370222, overlap 1370219 GCGTTAGGCGAATAA CCGAT GCA ATCGG TTGTTTGACTAACAT TERM 2032 1370390 - 1370342 - R 82 -12 -2.54504 | gap 1, opp_overlap 1370349 1370384, overlap 1370349 ATGGTGCAAATAGAT CAAAAAAGGAGCTG-GGACAAAA GTAA TTTTGTCTTCAGCTCCTTTTCGG TATCCGAACATTGGT TERM 2033 1370349 - 1370383 + r 100 -13.1 -4.2349 | gap 1, opp_overlap 1370349 1370342 AAATAGATCAAAAAA GGAGCTGG-GACAAAA GTAA TTTTGTCTTCAGCTCC TTTTCGGTATCCGAA TERM 2034 1370383 - 1370349 - R 100 -10.9 -5.28755 | gap 1, opp_overlap 1370349, overlap 1370342 AAATAGATCAAAAAA GGAGCTG-GGACAAAA GTAA TTTTGTCTTCAGCTCC TTTTCGGTATCCGAA TERM 2035 1370477 - 1370459 - R 74 -8.2 -3.66356 | opp_overlap 1370449 1370447 1370445 1370462, overlap 1370460 ACCCTGAATGTCAAA CGATTGCT TCC AGCAATCA TTCACCATTCTGTGT TERM 2036 1370476 - 1370460 - R 73 -9.5 -2.79492 | opp_overlap 1370449 1370447 1370445 1370462, overlap 1370459 CCCTGAATGTCAAAC GATTGCT TCC AGCAATC ATTCACCATTCTGTG coaE 1371107 - 1370499 - | dephosphocoenzyme A kinase fpg 1371943 - 1371107 - | formamidopyrimidine-DNA glycosylase polA 1374615 - 1371955 - | DNA-directed DNA polymerase I TERM 2037 1373603 - 1373591 - G 74 -4.1 -4.96848 | opp_overlap 1373578 GCGCCGATATAAAAA CCAAT TAA ATCGG CTGTGTGATAATTAT TERM 2038 1374702 - 1374732 + r 74 -7.8 -3.92716 | gap 1, opp_overlap 1374702 GACCGTACAAAAAAA GGAATC-TGGTAA AAATCC TTACCAAGATTCC TTTCAATTATTTTGC TERM 2039 1374732 - 1374702 - R 100 -8.5 -5.626 | gap 1, opp_overlap 1374702 GACCGTACAAAAAAA GGAATC-TGGTAAA AATC CTTACCAAGATTCC TTTCAATTATTTTGC LSA1407 1375230 - 1374739 - | MarR family transcriptional regulator LSA1408 1376491 - 1375706 - | hypothetical protein TERM 2040 1376194 - 1376205 + g 78 -2.2 -5.56263 | CCAAATCGTACCCTA GTGT ATTA GCAC TTTTTCTTTTCTCAT TERM 2041 1376787 - 1376768 - R 88 -5.7 -5.52384 | opp_overlap 1376777 TTTTCACTAAAAAAA CAGCACC TGTTTG GATGCTG TTCCAAATTTATTTA LSA1409 1377857 - 1376796 - | cell surface protein precursor TERM 2042 1377715 - 1377733 + g 91 -4.6 -5.61913 | overlap 1377716 GTACCTTGAATTTTG CCATTGAT GGT ATCAATGC TTTTTTGTGTTTGTT TERM 2043 1377716 - 1377732 + g 74 -8.1 -3.93487 | overlap 1377715 TACCTTGAATTTTGC CATTGAT GGT ATCAATG CTTTTTTGTGTTTGT TERM 2044 1378229 - 1378254 + r 100 -17.7 -4.87893 | opp_overlap 1378229 TAGTCATCAAAAAAA GAGGTCGGACA ATAT TGTCCGACCTC TTTTTGATTAACGTT TERM 2045 1378254 - 1378229 - R 100 -17.7 -5.53991 | opp_overlap 1378229 TAGTCATCAAAAAAA GAGGTCGGACA ATAT TGTCCGACCTC TTTTTGATTAACGTT smpB 1378732 - 1378262 - | SsrA-binding protein TERM 2046 1378740 - 1378758 + r 74 -4.6 -4.89339 | opp_overlap 1378740, overlap 1378742 TTTGCCATTCAATCA CCTACTTT TTA AAAGTACG TTTTTGTGAGTCCTT rnr 1381095 - 1378741 - | exoribonuclease R, RNase II family exoribonuclease TERM 2047 1379520 - 1379538 + g 100 -8.2 -5.26875 | GTGTCAAGACTTCTT GTAACATC ATA GGTGTTAC TTTTTTGCTTGAGCC LSA1412 1381869 - 1381111 - | putative lipase/esterase TERM 2048 1381940 - 1381914 - R 100 -13.1 -4.68424 | TAATTCATTTAAAAA GGTCTCCTGCT ATTTG AACAGGAGACC GCATCAACGTTCTTA secG 1382218 - 1381982 - | preprotein translocase subunit SecG LSA1414 1383872 - 1382298 - | putative chloride channel protein TERM 2049 1383383 - 1383364 - G 85 -9.2 -4.07687 | overlap 1383379 ATTGGTGCGTTAAAA GCGGCCGA TAAA CCAGCCGC CGCCCCACCAGCGAT TERM 2050 1384288 - 1384266 - g 83 -9.2 -3.91541 | opp_overlap 1384264 GGATTAAAGCAACAA GTACTAAGCG GCT CGCTTACTAC GCTGCTTGGACTTAC LSA1415 1384031 - 1385464 + | putative amino acid/polyamine transport protein TERM 2051 1385639 - 1385600 - T 100 -18.1 -2.71041 | opp_overlap 1385600 1385606, overlap 1385606 AACTCTAATCACAAC TCAAAACAGCCGCCCAT CATAAT ATGGGCGGCTGTTTTTA TTAACTTAATCTTCT TERM 2052 1385600 - 1385639 + T 100 -18.1 -3.24381 | opp_overlap 1385600 1385606, overlap 1385606 AACTCTAATCACAAC TCAAAACAGCCGCCCAT CATAAT ATGGGCGGCTGTTTTTA TTAACTTAATCTTCT TERM 2053 1385633 - 1385606 - T 100 -17.1 -4.33754 | opp_overlap 1385600 1385606, overlap 1385600 AATCACAACTCAAAA CAGCCGCCCAT CATAAT ATGGGCGGCTG TTTTTATTAACTTAA TERM 2054 1385606 - 1385633 + T 100 -17.1 -5.13741 | opp_overlap 1385606 1385600, overlap 1385600 AATCACAACTCAAAA CAGCCGCCCAT CATAAT ATGGGCGGCTG TTTTTATTAACTTAA LSA1416 1386797 - 1385640 - | ABC transporter permease/transmembrane protein LSA1417 1387381 - 1386815 - | ABC transporter ATP-binding protein LSA1418 1387706 - 1387392 - | ABC transporter ATP-binding protein LSA1419 1388079 - 1387693 - | GntR family transcriptional regulator TERM 2055 1388197 - 1388163 - R 100 -13.8 -5.37345 | opp_overlap 1388163 GTCAACCACAAAAAA GACGCTCACCAAAA TTATTCG TTTTGATGAGCGTC TTTTTGTTATTCAGA TERM 2056 1388163 - 1388197 + r 100 -12.3 -5.29445 | opp_overlap 1388163 GTCAACCACAAAAAA GACGCTCACCAAAAT TATTC GTTTTGATGAGCGTC TTTTTGTTATTCAGA LSA1420 1388968 - 1388204 - | putative lipase/esterase TERM 2057 1389048 - 1389080 + r 100 -19.4 -3.72576 | opp_overlap 1389048 TGGTGTATCCAAAAA GAGGACCAGACAAA ATTAA TTTGTCTGGTCCTC TTTAATCACCAACAC TERM 2058 1389080 - 1389048 - R 100 -19.4 -4.65895 | opp_overlap 1389048 TGGTGTATCCAAAAA GAGGACCAGACAAA ATTAA TTTGTCTGGTCCTC TTTAATCACCAACAC TERM 2059 1389313 - 1389283 - R 74 -9.8 -2.64616 | opp_overlap 1389292, overlap 1389289 CGGTTAGCTACATCA GTCAAATCACCAAC TCC GTTGGTAATTCGCC TGCTTAGGCTAATCC TERM 2060 1389307 - 1389289 - R 74 -8.2 -3.70149 | opp_overlap 1389292, overlap 1389283 GCTACATCAGTCAAA TCACCAAC TCC GTTGGTAA TTCGCCTGCTTAGGC argS 1391174 - 1389483 - | arginyl-tRNA synthetase TERM 2061 1391234 - 1391209 - R 93 -6.2 -5.7946 | TTTCGAACAAAAAAA GTCCCTTCCA AATAAA TGAAAGAGAC GAGAATTCCCGCGGT LSA1422 1393378 - 1391438 - | putative drug ABC exporter, ATP-binding and membrane-spanning/permease subunits TERM 2062 1392912 - 1392928 + g 70 -5.8 -4.40561 | gap 1 TCGGCAGCCAATGCG CGGG-CG ATAG CGACCCG TTGTTTTTGGCCCCC TERM 2063 1393485 - 1393510 + H 73 -3.5 -5.17054 | gap 1, opp_overlap 1393491, overlap 1393491 ATCAGTCTAAAGTCT TAA-AAATGACA ACC TGTCATTTATTG TTTTTTAGCTGTTCT TERM 2064 1393503 - 1393491 - H 76 -6.3 -4.64657 | opp_overlap 1393491 1393485 CTAAAGTCTTAAAAA TGACA ACC TGTCA TTTATTGTTTTTTAG TERM 2065 1393491 - 1393503 + H 78 -6.3 -4.84182 | opp_overlap 1393491, overlap 1393485 CTAAAGTCTTAAAAA TGACA ACC TGTCA TTTATTGTTTTTTAG TERM 2066 1393612 - 1393586 - H 100 -11.6 -5.63504 | opp_overlap 1393586 1393589 AATCGGACAAAAAAA GAAGCCAGACCA TTT CGGCCTAGCTTC TTCAATAATTATTCA TERM 2067 1393669 - 1393689 + H 79 -8.3 -4.11394 | opp_overlap 1393674 GAATCGGACCCGCGA CGCAAGCTT GGG AAGCTTGAG TTTTACCACTAAACT LSA1423 1393844 - 1394050 + | hypothetical protein TERM 2068 1394073 - 1394104 + F 100 -12.4 -5.22794 | opp_overlap 1394072 ATAAATTAAACGTAG GGAGCCGCACAAAA ATCA TTTTGTGTTGCTCC TTTTTTAGTACTTAT LSA1424 1394362 - 1395954 + | L-aspartate ABC transporter TERM 2069 1396013 - 1395979 - f 100 -19 -5.9873 | opp_overlap 1395979 CCATCATAAAAAAAA GAGATTGAAACAAAAA CTA TTTTTGTTTCAATCTC TTTTTTTGCTATCAT TERM 2070 1395979 - 1396013 + F 100 -19 -5.59357 | opp_overlap 1395979 CCATCATAAAAAAAA GAGATTGAAACAAAAA CTA TTTTTGTTTCAATCTC TTTTTTTGCTATCAT TERM 2071 1396588 - 1396604 + G 76 -9.5 -3.53012 | ATAATCTGGCTTTTG GCGTTTA TCC TAAACGC TTTGACGCCAACCGA TERM 2072 1396748 - 1396738 - g 71 -8.2 -3.49618 | overlap 1396739 CGCTGACAGAATTAA CGCG CCA CGCG GATTGGCAACTGGCC TERM 2073 1396886 - 1396859 - g 100 -12 -4.79756 | opp_overlap 1396859 GACACAATTTAAAAA GCACACCGTCAC TAAC GCAACGGTGCGC ATTTTACCACATACA LSA1426 1396074 - 1397012 + | putative aminopeptidase LSA1427 1397754 - 1396966 - | haloacid dehalogenase family hydrolase TERM 2074 1397688 - 1397702 + g 73 -7.1 -4.10552 | CTTGTTCAAAATTCG GTGGC AACTG GCCAC TTTCGTTTAATAAGG TERM 2075 1397835 - 1397879 + r 100 -14.5 -4.53607 | opp_overlap 1397842, overlap 1397837 1397842 TTTACATCTAACTCA TTAAAAATAGCACTGACGCAT TTA ACGCGTCAGTGCTATTTTCGG TTTTATGCTAATTTT TERM 2076 1397837 - 1397877 + r 100 -17.1 -2.57238 | opp_overlap 1397842, overlap 1397835 1397842 TACATCTAACTCATT AAAAATAGCACTGACGCAT TTA ACGCGTCAGTGCTATTTTC GGTTTTATGCTAATT TERM 2077 1397842 - 1397872 + r 100 -17 -4.4595 | opp_overlap 1397842, overlap 1397837 1397835 CTAACTCATTAAAAA TAGCACTGACGCAT TTA ACGCGTCAGTGCTA TTTTCGGTTTTATGC TERM 2078 1397872 - 1397842 - R 100 -19.2 -4.77157 | opp_overlap 1397842 1397837 1397835 CTAACTCATTAAAAA TAGCACTGACGCAT TTA ACGCGTCAGTGCTA TTTTCGGTTTTATGC LSA1428 1400122 - 1397882 - | putative copper-transporting P-type ATPase TERM 2079 1399854 - 1399842 - G 70 -2.6 -4.93365 | GCCGATAACCAAAAA CGCC GCCAA AGCG CTTGTAAATGAGCCG LSA1429 1400353 - 1400153 - | putative copper-chaperone/transport protein TERM 2080 1400424 - 1400402 - H 76 -3.4 -5.41143 | overlap 1400405 1400406 GATTGTTCAAAAAAA TAACCGCCTC AGC GAAACGATCA TTTATTCAATAAAGT TERM 2081 1400495 - 1400529 + H 71 -8.6 -3.24161 | opp_overlap 1400495, overlap 1400493 CTAAGCAATAAAAAA GACTAACCGGGTTGCT AAA AACAACTTGGTCAGTC TCTTGTAAGCATTTC TERM 2082 1400529 - 1400495 - H 100 -8.6 -5.5604 | opp_overlap 1400493 1400495 CTAAGCAATAAAAAA GACTAACCGGGTTGCT AAA AACAACTTGGTCAGTC TCTTGTAAGCATTTC LSA1430 1400732 - 1401565 + | hypothetical protein TERM 2083 1401557 - 1401606 + T 93 -13.9 -2.71125 | gap 1, opp_overlap 1401569, overlap 1401569 ATGGCGCAGATGGCT CATCAATAAAAATAGCAGTCCGCT TTT AGCGAACTGCTATTTTTGT-GTTG CTCTTTGTAAAGCAT TERM 2084 1401595 - 1401569 - T 100 -16 -5.1356 | opp_overlap 1401557 1401569 GCTCATCAATAAAAA TAGCAGTCCGCT TTT AGCGAACTGCTA TTTTTGTGTTGCTCT TERM 2085 1401569 - 1401595 + T 100 -13.8 -5.13344 | opp_overlap 1401569, overlap 1401557 GCTCATCAATAAAAA TAGCAGTCCGCT TTT AGCGAACTGCTA TTTTTGTGTTGCTCT rsuA2 1402312 - 1401593 - | pseudouridylate synthase, 16S-rRNA-specific LSA1432 1403946 - 1402309 - | putative drug:Na(+) antiporter (drug efflux pump) TERM 2086 1403508 - 1403486 - G 77 -4.8 -5.0133 | TACCCTTGGAAAAAA CCACGCATAA TAC TTAAGAGTGG AATCACCAACAATGG TERM 2087 1404092 - 1404122 + r 74 -9.8 -2.64616 | opp_overlap 1404092, overlap 1404098 GGATTAGCCTAATCA GGCGAATTGACGAT GCA ATCGTCGATTTGAC TGATGTCGCTAACCG TERM 2088 1404098 - 1404116 + r 74 -8.2 -3.70149 | opp_overlap 1404092, overlap 1404092 GCCTAATCAGGCGAA TTGACGAT GCA ATCGTCGA TTTGACTGATGTCGC TERM 2089 1404249 - 1404216 - R 80 -6.2 -4.90869 | opp_overlap 1404216 AGCATTAATTAAAAA TAACCATTAATCTC GCTTTT AAGCTTAATGGTTA TTTTAGATTAAGCGG TERM 2090 1404486 - 1404463 - R 100 -8.8 -6.17268 | opp_overlap 1404463 1404465 TCACAATAAAAAAAA CAGGATCCGC TTCC GCAGACCCCG TTTCATTTTTATTTC LSA1433 1405673 - 1404495 - | MFS family transporter TERM 2091 1405038 - 1405059 + g 76 -6.7 -4.56597 | opp_overlap 1405038 1405042, overlap 1405042 AAGGGCTGTAATTAA TAAGGCAAT CACG ATTGCTTTA TTTTTGAAGACCCGA TERM 2092 1405042 - 1405055 + g 75 -5.3 -4.85782 | opp_overlap 1405042 1405038, overlap 1405038 GCTGTAATTAATAAG GCAAT CACG ATTGC TTTATTTTTGAAGAC LSA1434 1405823 - 1406197 + | hypothetical protein TERM 2093 1406284 - 1406240 - T 100 -16.8 -3.17794 | opp_overlap 1406245, overlap 1406245 AACTGAGCATTAATA CAAAATTGGCAGTAATCCAA GGTTT TAGGATTACTGCCAATTTTA GATTAAGCGGAAGTT TERM 2094 1406245 - 1406279 + T 100 -15.2 -4.27316 | opp_overlap 1406240 1406245 AGCATTAATACAAAA TTGGCAGTAATCCAAG GTT TTAGGATTACTGCCAA TTTTAGATTAAGCGG TERM 2095 1406279 - 1406245 - T 100 -14.5 -4.71186 | opp_overlap 1406245, overlap 1406240 AGCATTAATACAAAA TTGGCAGTAATCCAA GGTTT TAGGATTACTGCCAA TTTTAGATTAAGCGG TERM 2096 1406341 - 1406393 + T 100 -17.9 -3.77831 | opp_overlap 1406351, overlap 1406351 1406387 TGATAGGAGTCTGGA TAGCAAAAAAGGCGCCAGGACAAGT AAT GCTTGTCTTGGCGCCTTCTTCACTA TTTGAATATTGATAA TERM 2097 1406351 - 1406383 + T 100 -20.7 -3.75657 | opp_overlap 1406351, overlap 1406341 CTGGATAGCAAAAAA GGCGCCAGGACAAGT AAT GCTTGTCTTGGCGCC TTCTTCACTATTTGA TERM 2098 1406383 - 1406351 - T 100 -17.8 -5.21709 | opp_overlap 1406351 1406341 CTGGATAGCAAAAAA GGCGCCAGGACAAG TAATG CTTGTCTTGGCGCC TTCTTCACTATTTGA LSA1435 1407808 - 1406456 - | putative amino acid:H(+) symporter TERM 2099 1406632 - 1406645 + g 71 -6.7 -4.14874 | opp_overlap 1406631 ATGGCATTTTAAATG GATGG GTTG CCATC TTTTCAGCGTGTTGT TERM 2100 1408009 - 1408036 + r 100 -12.9 -4.58663 | opp_overlap 1408009 TTAGATAAGAAAAAA GGACAGACAAA ATTGAA TTTGTCTGTCC TTTTTGAAACGTGCT TERM 2101 1408036 - 1408009 - R 100 -12.9 -5.60689 | opp_overlap 1408009 TTAGATAAGAAAAAA GGACAGACAAA ATTGAA TTTGTCTGTCC TTTTTGAAACGTGCT TERM 2102 1408109 - 1408091 - R 82 -10.4 -3.53811 | opp_overlap 1408094, overlap 1408094 GCTACGTCCCGCAAA TAATCGAC TTT GTCGATTA TCCACGAGCCTAGGC TERM 2103 1408106 - 1408094 - R 74 -7.7 -3.90922 | opp_overlap 1408094, overlap 1408091 ACGTCCCGCAAATAA TCGAC TTT GTCGA TTATCCACGAGCCTA TERM 2104 1408241 - 1408208 - R 100 -9.9 -5.4505 | opp_overlap 1408208 CCGCTTAATAAAAAA TTGTAAATAATCC TAAAACCT GGATTATTTACAA TTTTTTATTAATGCT TERM 2105 1408208 - 1408241 + r 100 -9.9 -5.52023 | opp_overlap 1408208 CCGCTTAATAAAAAA TTGTAAATAATCC TAAAACCT GGATTATTTACAA TTTTTTATTAATGCT leuS 1410831 - 1408408 - | leucyl-tRNA synthetase TERM 2106 1410943 - 1410918 - R 100 -14.9 -5.47399 | TTAACGTCAAAAAAA GTCCTATGGTA TAAA TACCATAGGAC GAATTGACCGCGATG LSA1437 1413171 - 1411165 - | N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase) (autolysin) LSA1438 1413361 - 1413999 + | putative phosphoesterase TERM 2107 1414398 - 1414415 + G 76 -6.9 -4.52042 | CCATCAAGTCTTATC CCGTCTC AATC GGGGCGG TTTATTACTTTTTAT LSA1439 1414018 - 1414578 + | putative methyltransferase TERM 2108 1414582 - 1414616 + T 100 -19.6 -5.30155 | opp_overlap 1414582 ATCAAAAAATAAAAA GGTTTCCGGATAAAAG TTA TTTTTATCCGGAAACC TTTTTTGATTACTCA TERM 2109 1414616 - 1414582 - T 100 -18.9 -5.77571 | opp_overlap 1414582 ATCAAAAAATAAAAA GGTTTCCGGATAAAA GTTAT TTTTATCCGGAAACC TTTTTTGATTACTCA cutC 1415270 - 1414641 - | CutC family copper homeostasis protein TERM 2110 1414771 - 1414785 + g 70 -7.2 -3.79519 | AAACGCACTAGTTCT TGAAGA CGT TCTTCA TTTAATGGTGCCGTT TERM 2111 1415371 - 1415338 - R 86 -9.9 -4.27316 | opp_overlap 1415338 CCGCTTAATCTAAAA TTTCTATTAATCC TAAAATCT GGATTAATAGAAA TTTTTAATTAATGCT TERM 2112 1415338 - 1415371 + r 100 -9.9 -4.90869 | opp_overlap 1415338 CCGCTTAATCTAAAA TTTCTATTAATCC TAAAATCT GGATTAATAGAAA TTTTTAATTAATGCT bacA 1416337 - 1415510 - | undecaprenyl pyrophosphate phosphatase TERM 2113 1416468 - 1416451 - R 85 -2.6 -5.88197 | TTAAACACAAAAAAA GACCGC CAAATC ACGGCC TTTTGCTTATTTTTA rluA4 1417401 - 1416481 - | pseudouridine synthase, 23S-rRNA-specific ppnK 1418197 - 1417391 - | inorganic polyphosphate/ATP-NAD kinase LSA1444 1418868 - 1418194 - | hypothetical protein TERM 2114 1418786 - 1418802 + g 71 -2.3 -5.13343 | TTTTGTTGATATTGT TTACG CATACCA CGTAA TTTTATTTTCAATTC LSA1445 1419015 - 1419596 + | hypothetical protein TERM 2115 1420210 - 1420223 + G 74 -6.7 -4.30719 | TTGTGATTCTTACGA CCTCT TGAA AGAGG TTTGTTCTCAGGGAG LSA1446 1419674 - 1420318 + | hypothetical protein TERM 2116 1420338 - 1420373 + T 89 -7.7 -5.00616 | opp_overlap 1420338 1420341 TCATTCAGCACTAAA TAAGCGCTCAAGATT TTAAAC AGTCTTGGACGCTTA TTTTTTAGCCCGCAA LSA1447 1421345 - 1420371 - | hypothetical protein TERM 2117 1420873 - 1420860 - G 75 -5.2 -4.80289 | ACAAAATAGATAAAA GCCC CATGCC GGGC AATAATTTAAAAAAG TERM 2118 1421411 - 1421366 - R 88 -5 -5.46657 | gap 1, opp_overlap 1421377, overlap 1421377 CACCCCAAGAAAAAA TACGCAAAAAAGCCAGTTGAT TATTC ATCAACTGGCTTTTTAAT-TA ATCTTTAAAATAGTA TERM 2119 1421377 - 1421401 + r 100 -13 -4.92777 | opp_overlap 1421366 1421377 AAAATACGCAAAAAA GCCAGTTGAT TATTC ATCAACTGGC TTTTTAATTAATCTT TERM 2120 1421401 - 1421377 - R 100 -13 -5.19916 | opp_overlap 1421377, overlap 1421366 AAAATACGCAAAAAA GCCAGTTGAT TATTC ATCAACTGGC TTTTTAATTAATCTT mecA 1422098 - 1421409 - | adaptor protein TERM 2121 1422265 - 1422246 - R 100 -12.2 -5.14563 | opp_overlap 1422246 TTTGCTACTAAAAAA GTCGAGGT ATCC ACCTCGAC TTTTTTTAGAATCCT TERM 2122 1422246 - 1422265 + r 100 -12.2 -5.44721 | opp_overlap 1422246 TTTGCTACTAAAAAA GTCGAGGT ATCC ACCTCGAC TTTTTTTAGAATCCT spxA 1422669 - 1422271 - | transcriptional regulator Spx LSA1450 1423736 - 1422996 - | beta-lactamase family hydrolase TERM 2123 1423837 - 1423858 + r 86 -10.2 -4.08853 | opp_overlap 1423837 TTAAGCATCAAAAAA GGATTGGC ATGTTA GCCAATCC TTCTTTACTATTGAA TERM 2124 1423858 - 1423837 - R 100 -10.2 -5.2189 | opp_overlap 1423837 TTAAGCATCAAAAAA GGATTGGC ATGTTA GCCAATCC TTCTTTACTATTGAA LSA1451 1424651 - 1423866 - | integral membrane protein LSA1452 1426768 - 1424669 - | ABC transporter permease/transmembrane protein LSA1453 1427522 - 1426746 - | ABC transporter ATP-binding protein TERM 2125 1426981 - 1426991 + g 71 -6.8 -4.18197 | opp_overlap 1426971 1426980 AAATACCGTAAAAGT TCGG TTG CCGA TTTTGAATCCAAGCT TERM 2126 1427828 - 1427840 + G 86 -9.1 -4.2586 | opp_overlap 1427827 TAGATATCAATTTAC CCGTC TAT GACGG TTTCTATTGGTGTCG LSA1454 1427662 - 1428336 + | two-component system, response regulator LSA1455 1428346 - 1429365 + | two-component system, sensor histidine kinase TERM 2127 1429462 - 1429416 - f 89 -10.3 -4.053 | gap 1, opp_overlap 1429421, overlap 1429421 ATCATTTTAGATAAA TACAATCGGCTAGTTCC-CCTT TTTG AAGGTGGTACTAGCCGATTTTT TTATTCACTGACTCA TERM 2128 1429457 - 1429421 - f 100 -14.6 -3.93742 | gap 1, opp_overlap 1429421, overlap 1429416 TTTAGATAAATACAA TCGGCTAGTTCC-CCTT TTTG AAGGTGGTACTAGCCGA TTTTTTTATTCACTG TERM 2129 1429421 - 1429457 + F 100 -14.6 -5.8187 | gap 1, opp_overlap 1429421 1429416 TTTAGATAAATACAA TCGGCTAGTTCC-CCTT TTTG AAGGTGGTACTAGCCGA TTTTTTTATTCACTG TERM 2130 1430184 - 1430143 - g 82 -3.1 -5.5074 | gap 1, opp_overlap 1430153, overlap 1430148 CAACCCAACAAAAAA CAACGCAAGT-CCCCTTAAC GCA GTTAAATGGTACTTGGACTG CAGCCGGCACAACGG LSA1456 1429524 - 1430690 + | lipoprotein precursor TERM 2131 1430716 - 1430696 - T 100 -9.7 -5.75822 | opp_overlap 1430696 TACAAACTAAAAAAA GGAATACGC TAA GCGTCTTCC TTTTTTATTAGGCAG TERM 2132 1430696 - 1430716 + T 100 -9.7 -5.4505 | opp_overlap 1430696 TACAAACTAAAAAAA GGAATACGC TAA GCGTCTTCC TTTTTTATTAGGCAG LSA1457 1432019 - 1430724 - | putative cellobiose-specific phosphotransferase system, enzyme IIC TERM 2133 1432201 - 1432155 - R 90 -13.3 -2.82895 | opp_overlap 1432160, overlap 1432160 GTTTTCACTAATAAC CAAAAGAAGCACCAACTCACT TAAAT ACTGAGTTGATGCTTCTTTTT TAATTTATACGGTAT TERM 2134 1432196 - 1432160 - R 100 -13.2 -4.5774 | opp_overlap 1432160, overlap 1432155 CACTAATAACCAAAA GAAGCACCAACTCACT TAAAT ACTGAGTTGATGCTTC TTTTTTAATTTATAC TERM 2135 1432160 - 1432196 + r 100 -11 -5.42514 | opp_overlap 1432160 1432155 CACTAATAACCAAAA GAAGCACCAACTCACT TAAAT ACTGAGTTGATGCTTC TTTTTTAATTTATAC nrdG 1432847 - 1432266 - | anaerobic ribonucleotide reductase activator protein nrdD 1435091 - 1432875 - | anaerobic ribonucleoside triphosphate reductase TERM 2136 1435212 - 1435183 - R 95 -8 -5.24989 | gap 1, opp_overlap 1435182 TTAGACATTAAAAAA GGCGTATACCAAC TGTAT GTC-GTATACGCC AATTGTGCACAATTT atkB 1437331 - 1435292 - | copper-transporting P-type ATPase TERM 2137 1436011 - 1436025 + g 77 -8.6 -4.06179 | TTGCGCCTGTCAGCC CGATTC CTT GAATCG TTTGTACATTTTCAG TERM 2138 1437085 - 1437075 - G 79 -8.2 -4.16016 | GCACCTTTTAAGAAA GGCG CGC CGCC GTAAAAGAATAGGAA atkY 1437774 - 1437334 - | negative regulator of copper transport operon, AtkY TERM 2139 1437498 - 1437532 + g 76 -7.9 -4.21275 | TCTGCCCTTTTTTCA TGCCACACAAGTGCT CAAAA AGACTTTGTGTGGCA TTTTCCATCGCTTCA TERM 2140 1437871 - 1437906 + r 100 -20.8 -3.5936 | opp_overlap 1437871 TTTGCGTACAAAAAA GGGTGTTAAGACAAAA TTAC TTTTGTCTTAACACCC TTTAAAAAGTTTAAG TERM 2141 1437906 - 1437871 - R 100 -20.8 -5.24129 | opp_overlap 1437871 TTTGCGTACAAAAAA GGGTGTTAAGACAAAA TTAC TTTTGTCTTAACACCC TTTAAAAAGTTTAAG ptsI 1439647 - 1437923 - | phosphoenolpyruvate-protein phosphotransferase(phosphotransferase system, enzyme I) ptsH 1439913 - 1439647 - | phosphocarrier protein HPr TERM 2142 1439892 - 1439904 + g 75 -5.5 -4.75308 | CTGTGTCTGCTACTA CGTGA AAA TCGCG TTTTTCCATGTTAAT LSA1464 1440247 - 1440056 - | hypothetical protein TERM 2143 1440962 - 1440950 - g 71 -3.3 -5.0538 | overlap 1440952 GTTTAGCGCAAAAAA TTGCC GAT GGCGA CGTTCCTGCTAAATT TERM 2144 1441946 - 1441925 - g 78 -7.3 -4.47786 | overlap 1441926 AATTAGCCAAACAAA TTGCCAAAG AACT CTTTGGCAG TACCGATGCGATGAT TERM 2145 1441945 - 1441926 - g 81 -10.8 -3.27587 | overlap 1441925 ATTAGCCAAACAAAT TGCCAAAG AACT CTTTGGCA GTACCGATGCGATGA clpE 1440481 - 1442646 + | ATPase/chaperone ClpE, putative specificity factor for ClpP protease LSA1466 1442754 - 1443050 + | hypothetical protein TERM 2146 1443065 - 1443091 + F 100 -13.1 -4.9792 | opp_overlap 1443061 1443064 GACGGTTGAAAGCAG GCCACTACCGA TAACT TTGGTAGTGGC TTTTTGTATGCAATC LSA1467 1443175 - 1443597 + | hypothetical protein TERM 2147 1443611 - 1443645 + F 100 -13 -5.52384 | opp_overlap 1443600 1443611 AAAAGATGATTAAAA GGGATTAAGGCAAATA AAA TTTTTGCCCTAATCCC TTTTTTTGCTAGCCA TERM 2148 1443645 - 1443611 - f 100 -15.2 -4.37971 | opp_overlap 1443611, overlap 1443600 AAAAGATGATTAAAA GGGATTAAGGCAAATA AAA TTTTTGCCCTAATCCC TTTTTTTGCTAGCCA LSA1468 1443804 - 1444889 + | hypothetical protein TERM 2149 1444955 - 1444918 - T 100 -23.1 -4.98522 | opp_overlap 1444918 AACGCTATATAAAAA GAGGTCTTCTGACAAAA TCGA TTTTGTCAGAAGACCTC TTTTTGATTGTTTAA TERM 2150 1444918 - 1444955 + T 100 -23.1 -5.04356 | opp_overlap 1444918 AACGCTATATAAAAA GAGGTCTTCTGACAAAA TCGA TTTTGTCAGAAGACCTC TTTTTGATTGTTTAA prfC 1446579 - 1445002 - | peptide chain release factor 3 TERM 2151 1446542 - 1446557 + g 75 -5.4 -4.90013 | gap 1 ATTGCAAAAGTCCGC CGGC-GT TCA ACAGCCG TTTTTAATTCAGTTG LSA1470 1447950 - 1446610 - | putative ion Mg(2+)/C(o2+) transport protein, hemolysinC related TERM 2152 1446857 - 1446875 + g 70 -9.6 -2.83255 | TTAATTGGCATCCGG CCCATTAC CTT GTAGTGGG TCTCGTCAATCTTCT LSA1471 1449195 - 1448089 - | putative transport protein TERM 2153 1448328 - 1448342 + g 73 -7.2 -4.14392 | CAATAACTACTACGA CAATCA CCA TGATTG TTTTCGGAATTGAAA TERM 2154 1448499 - 1448488 - G 70 -5.8 -4.33621 | CAGGTAACCAATAAA GGTG AAAA CACC GACGAATAAACATTC TERM 2155 1449382 - 1449392 + G 74 -4.6 -4.87665 | AGATGGTCTCGCTAT TCGC CAA GCGG TTTTTGTCGCTGAAC LSA1472 1449323 - 1449754 + | GNAT family acetyltransferase LSA1473 1449830 - 1450303 + | integral membrane protein TERM 2156 1450347 - 1450365 + F 100 -8.9 -5.626 | opp_overlap 1450350 ACATAATTTTCCCAA CCATCCT TCTTC AGGATGG TTTTTTTGTGCGCTA LSA1474 1450436 - 1452145 + | bifunctional glycosyl transferase family protein TERM 2157 1452187 - 1452161 - T 100 -15.2 -5.77856 | opp_overlap 1452161 AAGAAAGCAAAAAAA GAAGGCCGCACA ATC TGTGCGGTCTTC TTTTGCTATTAAGAC TERM 2158 1452161 - 1452187 + T 100 -17.4 -4.4261 | opp_overlap 1452161 AAGAAAGCAAAAAAA GAAGGCCGCACA ATC TGTGCGGTCTTC TTTTGCTATTAAGAC LSA1475 1452750 - 1452214 - | hypothetical protein LSA1476 1453940 - 1452837 - | putative A/G-specific adenine glycosylase TERM 2159 1453578 - 1453595 + g 71 -4.7 -4.66833 | overlap 1453581 GGCGCCCGCTGTATA CGGGCCG ATGC CGGCTAG TTTTTCCAATTCAGC recX 1454766 - 1453927 - | recombination regulator RecX LSA1478 1454914 - 1454735 - | hypothetical protein TERM 2160 1455826 - 1455846 + G 73 -7.5 -4.20696 | opp_overlap 1455826 1455829, overlap 1455829 CCCAAACTGATTTAA CGATGCGGA TTA TCCGCACTG TTTTAAAATTAGTCG TERM 2161 1455829 - 1455843 + G 72 -10 -2.81289 | opp_overlap 1455826 1455829, overlap 1455826 AAACTGATTTAACGA TGCGGA TTA TCCGCA CTGTTTTAAAATTAG TERM 2162 1455843 - 1455829 - g 72 -10 -2.76456 | opp_overlap 1455829 1455826, overlap 1455826 AAACTGATTTAACGA TGCGGA TTA TCCGCA CTGTTTTAAAATTAG TERM 2163 1456627 - 1456615 - g 73 -2.7 -5.10029 | overlap 1456605 ACCAAGTTGAAAAAA TCCAA CCG TTAGA CATGTTCCCACAAAC LSA1479 1455300 - 1456691 + | TrmA family RNA methyltransferase TERM 2164 1456741 - 1456771 + T 74 -9.8 -2.64616 | opp_overlap 1456750, overlap 1456747 1456750 GGACTAGCCTAATCA GGCGAATAACCGAT GCA ATCGGTTGTTTGAC TGATGTCGCTAGCCA TERM 2165 1456747 - 1456765 + T 74 -8.2 -3.70149 | opp_overlap 1456750, overlap 1456741 1456750 GCCTAATCAGGCGAA TAACCGAT GCA ATCGGTTG TTTGACTGATGTCGC TERM 2166 1456762 - 1456750 - T 72 -7.7 -3.66732 | opp_overlap 1456747 1456741 1456750 TAATCAGGCGAATAA CCGAT GCA ATCGG TTGTTTGACTGATGT TERM 2167 1456750 - 1456762 + T 74 -7.7 -3.98075 | opp_overlap 1456750, overlap 1456747 1456741 TAATCAGGCGAATAA CCGAT GCA ATCGG TTGTTTGACTGATGT TERM 2168 1456908 - 1456871 - T 100 -11.5 -5.64873 | opp_overlap 1456871 1456875, overlap 1456875 TCTAATAACAAAAAA CAAACAAGCCATCCT TTAAAATG AGGATGGCTTGTTTT AGTTTTCTTTCACTT TERM 2169 1456871 - 1456910 + T 80 -6 -4.96468 | gap 2, opp_overlap 1456871 1456875, overlap 1456875 TCTAATAACAAAAAA C-AAA-CAAGCCATCCTT TAAAAT GAGGATGGCTTGTTTTAG TTTTCTTTCACTTTA TERM 2170 1456875 - 1456904 + T 100 -13 -4.81644 | opp_overlap 1456871 1456875, overlap 1456871 ATAACAAAAAACAAA CAAGCCATCCTT TAAAAT GAGGATGGCTTG TTTTAGTTTTCTTTC TERM 2171 1456904 - 1456875 - T 100 -12.3 -5.22768 | opp_overlap 1456875 1456871, overlap 1456871 ATAACAAAAAACAAA CAAGCCATCCT TTAAAATG AGGATGGCTTG TTTTAGTTTTCTTTC LSA1480 1457413 - 1456907 - | hypothetical protein TERM 2172 1456962 - 1456976 + g 70 -2.8 -4.92756 | AGCGGATTATCACTG TCTGTT TCT AACTGA TTTGTTTTTAATAAT LSA1481 1457504 - 1457974 + | hypothetical protein TERM 2173 1458009 - 1457969 - f 73 -5.5 -4.60924 | opp_overlap 1457971 1457979, overlap 1457979 GAAACCGTTCAAAAA TACTAAGAAATAGCGGC CGTTAAT GCCGCTATTTTTTTGTT TCTATTTTTAAATAA TERM 2174 1457971 - 1458007 + F 95 -10.3 -4.56791 | opp_overlap 1457969 1457979, overlap 1457979 AACCGTTCAAAAATA CTAAGAAATAGCGGC CGTTAAT GCCGCTATTTTTTTG TTTCTATTTTTAAAT TERM 2175 1457999 - 1457979 - f 86 -8.3 -4.40199 | opp_overlap 1457971 1457979, overlap 1457969 AAAAATACTAAGAAA TAGCGGC CGTTAAT GCCGCTA TTTTTTTGTTTCTAT TERM 2176 1457979 - 1457999 + F 100 -8.3 -6.04953 | opp_overlap 1457979 1457969, overlap 1457971 AAAAATACTAAGAAA TAGCGGC CGTTAAT GCCGCTA TTTTTTTGTTTCTAT LSA1482 1458061 - 1458303 + | hypothetical protein TERM 2177 1458314 - 1458342 + T 76 -9.7 -3.02202 | opp_overlap 1458315, overlap 1458313 CATGACAATCAAAAA AGGATTCAAAGTT GAT AGCTTTGAATCCC CTTTATGTCGAGGTA TERM 2178 1458341 - 1458315 - T 100 -11 -5.33848 | opp_overlap 1458314 1458313 ATGACAATCAAAAAA GGATTCAAAGTT GAT AGCTTTGAATCC CCTTTATGTCGAGGT LSA1483 1458815 - 1458762 - | hypothetical protein TERM 2179 1458960 - 1458926 - R 93 -6.5 -5.49568 | opp_overlap 1458926, overlap 1458957 AAGCTAAAATAAAAA GACGATTCGGATAAG ATTAA CTTATCGAAAGCGTC TTTTTGAAACGTGCC mvaS 1460246 - 1459083 - | hydroxymethylglutaryl-CoA synthase mvaA 1461529 - 1460261 - | hydroxymethylglutaryl-CoA reductase LSA1486 1462718 - 1461522 - | putative acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase) TERM 2180 1461596 - 1461607 + g 71 -2.2 -5.13527 | CAATACATAATGAAG CGAC CCCA GTTG TTTTGTTTGTTCGTT TERM 2181 1462784 - 1462765 - H 82 -6.5 -4.94972 | opp_overlap 1462760 1462765 TACTATAACTAAAAA TTTGGCA ATTGTA TGCCAAA TTTACTTTTCTTTAA TERM 2182 1462765 - 1462784 + H 76 -6.5 -4.37871 | opp_overlap 1462765, overlap 1462760 TACTATAACTAAAAA TTTGGCA ATTGTA TGCCAAA TTTACTTTTCTTTAA LSA1487 1462913 - 1463125 + | hypothetical protein LSA1488 1463158 - 1463379 + | hypothetical protein TERM 2183 1463467 - 1463436 - f 100 -17.4 -5.15969 | opp_overlap 1463436 TTCGAATCCAAAAAA CGCCCGGGACAAAT TCAA ATTTGTTCCGGGCG TTTTTTTGCCTTTAT TERM 2184 1463436 - 1463467 + F 100 -19.6 -5.59564 | opp_overlap 1463436 TTCGAATCCAAAAAA CGCCCGGGACAAAT TCAA ATTTGTTCCGGGCG TTTTTTTGCCTTTAT LSA1489 1463572 - 1464177 + | integral membrane protein LSA1490 1464174 - 1464395 + | hypothetical protein LSA1491 1464382 - 1464681 + | hypothetical protein LSA1492 1465496 - 1464678 - | hypothetical protein LSA1493 1465653 - 1466543 + | putative diacylglycerol kinase TERM 2185 1466577 - 1466556 - T 100 -11.7 -5.15634 | opp_overlap 1466556 TAGGCTATTAAAAAA GACAAAGTC TTAC GACTTTGTC TTTTTTCTATTTCGT TERM 2186 1466556 - 1466577 + T 100 -11.7 -5.5762 | opp_overlap 1466556 TAGGCTATTAAAAAA GACAAAGTC TTAC GACTTTGTC TTTTTTCTATTTCGT LSA1494 1467480 - 1466584 - | hypothetical protein rfbB 1468582 - 1467578 - | putative dTDP-glucose 4,6-dehydratase TERM 2187 1468425 - 1468470 + g 100 -14.1 -3.23274 | gap 1, opp_overlap 1468419 1468418, overlap 1468419 1468430 ACTACCAACGTCACT CGTTCTGCTGGTAAGCCGGCTA AAT TAGCCCGATTACCAGC-GTACG TTAACTTATCCAAAA TERM 2188 1468430 - 1468466 + g 100 -14.5 -2.57985 | opp_overlap 1468419 1468418, overlap 1468425 1468419 CAACGTCACTCGTTC TGCTGGTAAGCCGGCTA AAT TAGCCCGATTACCAGCG TACGTTAACTTATCC TERM 2189 1468560 - 1468548 - G 76 -6.9 -4.49337 | overlap 1468539 TTAGAACCGATAAAA CCGGC ACC ACCGG TTACAAGAATATGAC TERM 2190 1468669 - 1468639 - R 100 -8.4 -5.88565 | opp_overlap 1468639 CGGACAACAAAAAAA GAGTTACCCAGT AATTTAA ACCAGGTAACTC TTTAAACAGCTTTTT LSA1496 1469419 - 1468685 - | putative glutamine/glutamate ABC transporter, ATP-binding subunit LSA1497 1470855 - 1469419 - | putative glutamine/glutamate ABC transporter, membrane-spanning/substrate-binding subunit precursor TERM 2191 1470460 - 1470477 + g 74 -4.1 -5.00884 | overlap 1470462 TTTCAATCCTTTTAA GCCAGTA ATCT TACTGTC TTTTTTAACCGCCAT TERM 2192 1470521 - 1470537 + g 72 -8.1 -3.78597 | TGATAATAAGGATCC GCAAAAT CAA ATTTTGC TTTCCGTTCATCCGT TERM 2193 1471048 - 1471022 - R 83 -5.9 -5.12707 | CTAAATGCTAAAAAA GGCAATTAACC TACCC GGTTAACCACC TTTATTTCGAGCATT LSA1498 1471496 - 1471062 - | hypothetical protein TERM 2194 1471170 - 1471189 + g 71 -3 -5.03747 | gap 1 TAACGAATCGTTCTC TGTT-TCAA TGA TTGATAACA TTTTTTCAACACTTT def2 1471889 - 1472299 + | peptide deformylase TERM 2195 1472281 - 1472294 + F 70 -6.7 -4.00469 | TGAAATAGATCATTG TGAGG GCAT CCTCA TTTAATTCCTATTAC TERM 2196 1472339 - 1472313 - f 85 -12.3 -2.94595 | opp_overlap 1472313 AATTCCTATTACACA GCCACTAGTCC GATTT GGTCTAGTGGC TTTTTTATATCACTA TERM 2197 1472313 - 1472339 + F 100 -13 -5.38047 | opp_overlap 1472313 AATTCCTATTACACA GCCACTAGTCCG ATT TGGTCTAGTGGC TTTTTTATATCACTA TERM 2198 1472390 - 1472359 - f 78 -6.2 -4.79223 | opp_overlap 1472353 1472360, overlap 1472360 1472378 TTATATCACTAAAAA TTTTTTTAATTAAT TTAA ATTAATTAAAAAAT TAAATTCGGATATTA TERM 2199 1472389 - 1472360 - f 78 -9.7 -3.46811 | opp_overlap 1472353 1472360, overlap 1472359 1472378 TATATCACTAAAAAT TTTTTTAATTAAT TTAA ATTAATTAAAAAA TTAAATTCGGATATT TERM 2200 1472360 - 1472389 + F 77 -9.7 -3.19018 | opp_overlap 1472360 1472359 1472378, overlap 1472353 TATATCACTAAAAAT TTTTTTAATTAAT TTAA ATTAATTAAAAAA TTAAATTCGGATATT TERM 2201 1473314 - 1473289 - g 100 -8.3 -5.04222 | TAATGAAATTAAAAA CACCAGCATCC TAAT GGATAATGGTG AAGAACTAGATTTAA LSA1500 1472666 - 1473397 + | two-component system, response regulator LSA1501 1473390 - 1474718 + | two-component system, sensor histidine kinase LSA1503 1474756 - 1475310 + | hypothetical protein LSA1504 1475285 - 1475422 + | hypothetical protein TERM 2202 1475438 - 1475458 + T 100 -9.7 -5.67063 | opp_overlap 1475438 TTCATTACAAAAAAA GATCCCGTC AAT GACGAGATC TTTTTTTATGCTCAA TERM 2203 1475458 - 1475438 - T 100 -11.9 -5.67063 | opp_overlap 1475438 TTCATTACAAAAAAA GATCCCGTC AAT GACGAGATC TTTTTTTATGCTCAA LSA1506 1475580 - 1475500 - | hypothetical protein TERM 2204 1475584 - 1475542 - G 76 -10.8 -2.70932 | opp_overlap 1475542 1475547, overlap 1475547 TTTTCCGGTTAACCA CAAAATGGGAATCATGGC TAAACCC GCCATAATCCCCATTTTC TTGTTAATCCTCAAA TERM 2205 1475547 - 1475579 + g 84 -6.3 -4.92757 | opp_overlap 1475542 1475547, overlap 1475542 CGGTTAACCACAAAA TGGGAATCATGGC TAAACCC GCCATAATCCCCA TTTTCTTGTTAATCC TERM 2206 1475579 - 1475547 - G 100 -10.7 -4.5442 | opp_overlap 1475547 1475542, overlap 1475542 CGGTTAACCACAAAA TGGGAATCATGGC TAAACCC GCCATAATCCCCA TTTTCTTGTTAATCC galU 1476525 - 1475623 - | UTP--glucose-1-phosphate uridylyltransferase TERM 2207 1476316 - 1476345 + g 70 -7.9 -3.66356 | overlap 1476317 TTGTTCCAGTTCAGG TGCTGAATCGAAG TGAT CTTCGATTGGGCG TTTACCCTTACCAGT TERM 2208 1476317 - 1476344 + g 70 -9.2 -2.79492 | overlap 1476316 TGTTCCAGTTCAGGT GCTGAATCGAAG TGAT CTTCGATTGGGC GTTTACCCTTACCAG LSA1508 1476717 - 1477538 + | hypothetical protein LSA1509 1477743 - 1478291 + | hypothetical protein TERM 2209 1478351 - 1478300 - T 85 -9.8 -3.8772 | opp_overlap 1478299 1478305, overlap 1478305 ATTATAAAAATAAGA TAAAAGACTCTAAAGGAGCT AGAAATTTGATA AGCTTCCTTAGAGTCTTTTA ATATATATCACTATT TERM 2210 1478346 - 1478305 - T 78 -5.3 -4.90321 | opp_overlap 1478299 1478305, overlap 1478300 AAAAATAAGATAAAA GACTCTAAAGGAGCT AGAAATTTGATA AGCTTCCTTAGAGTC TTTTAATATATATCA TERM 2211 1478305 - 1478346 + T 70 -5.3 -4.41353 | opp_overlap 1478305 1478300, overlap 1478299 AAAAATAAGATAAAA GACTCTAAAGGAGCT AGAAATTTGATA AGCTTCCTTAGAGTC TTTTAATATATATCA LSA1510_a 1480345 - 1478855 - | putative teichoic acid/polysaccharide export protein TERM 2212 1479406 - 1479450 + g 100 -15.5 -3.93556 | opp_overlap 1479409, overlap 1479409 CCATATATCCCCATA CAACTAGGATAATAATGAT ATTAGTG ATTATTATTATCCTAGTTG TTTCCTTAACTCCAT TERM 2213 1479447 - 1479409 - G 76 -9.2 -3.49951 | opp_overlap 1479409 1479406 TATATCCCCATACAA CTAGGATAATAATGAT ATTAGTG ATTATTATTATCCTAG TTGTTTCCTTAACTC TERM 2214 1479409 - 1479447 + g 100 -11.4 -4.09321 | opp_overlap 1479409, overlap 1479406 TATATCCCCATACAA CTAGGATAATAATGAT ATTAGTG ATTATTATTATCCTAG TTGTTTCCTTAACTC TERM 2215 1480025 - 1479998 - G 89 -10.2 -3.98204 | opp_overlap 1479991 1479996 1480001, overlap 1480001 AAAGATAGTTACAAA TAATTTTTGTAA TTCT TTACAAAAATTA CCTATTATATTAGGA TERM 2216 1480022 - 1480001 - G 73 -7.5 -4.10188 | opp_overlap 1479991 1480001 1479996, overlap 1479998 GATAGTTACAAATAA TTTTTGTAA TTCT TTACAAAAA TTACCTATTATATTA LSA1510_b 1481376 - 1480351 - | hypothetical protein TERM 2217 1480584 - 1480548 - G 76 -9.5 -3.42861 | AACTCATAATACGAA CATTCCCTTGTACTAAC AGT GCTAGAACTAGAGAATG GAATCTTGTAGTGAT LSA1510_c 1482632 - 1481358 - | hypothetical protein TERM 2218 1481514 - 1481544 + g 72 -7.8 -3.85518 | opp_overlap 1481514 1481517, overlap 1481517 CACGGCGAATACTAA TAATAGATACGC AATAAAC GTGTATCTATTA TTCTTAGTTAATATT LSA1510_d 1483596 - 1482616 - | glycosyl transferase family protein LSA1510_e 1484667 - 1483603 - | putative glycosyl transferase, group 1 LSA1510_f 1485599 - 1484685 - | glycosyl transferase family protein LSA1510_g 1486352 - 1485657 - | putative priming glycosyl transferase TERM 2219 1486216 - 1486188 - G 100 -11.1 -4.81083 | overlap 1486190 CGCAAGTACCAAAAA TAGCGGGCTTAAT AAA ATTAACCCCGCCA AACTGGCAACAATAT TERM 2220 1486214 - 1486190 - G 100 -11.5 -4.02049 | overlap 1486188 CAAGTACCAAAAATA GCGGGCTTAAT AAA ATTAACCCCGC CAAACTGGCAACAAT TERM 2221 1486278 - 1486240 - G 74 -6.9 -4.26003 | gap 1, opp_overlap 1486251, overlap 1486236 1486241 ACAATATCGAATAAA CGTTTTAGGCC-GCGATA AATA TATCGCTGATCTAAAACA ACCTGATTAAAAAGC LSA1511 1487121 - 1486375 - | putative polysaccharide biosynthesis protein, chain length determination LSA1512 1487868 - 1487128 - | putative polysaccharide biosynthesis protein, chain length determination LSA1513 1488926 - 1487955 - | putative transcriptional regulator (involved in exocellular polysaccharide biosynthesis) TERM 2222 1488595 - 1488632 + g 70 -2.6 -4.96848 | GTTTGTTTCGTCTGA GGATTGACGGTTGCTA AAATCA TTGTATCCGTCCGTCC TTTTTCTGTACGACC TERM 2223 1488856 - 1488868 + g 91 -7.7 -4.83722 | AGTAGAATAATTTTC CATGG GGT CCATG TTTTCTTATGGTGTT LSA1514 1489999 - 1489061 - | putative ribonuclease TERM 2224 1490165 - 1490135 - R 90 -2.6 -6.09196 | opp_overlap 1490153 1490154 1490157, overlap 1490160 CTGAAAACAAAAAAA GAAGCCTTCCCA TTTTTTT TAAGAAGCCTTC TCATTTTTTTAAGAA TERM 2225 1490153 - 1490190 + r 80 -8.6 -3.91642 | opp_overlap 1490135 1490160, overlap 1490154 1490157 GCCTTCCCATTTTTT TTAAGAAGCCTTCTCA TTTTTT TAAGAAGGCTTCTTGG TTTGGTGCTTGTTTT TERM 2226 1490154 - 1490189 + r 75 -9.9 -2.93358 | opp_overlap 1490135 1490160, overlap 1490153 1490157 CCTTCCCATTTTTTT TAAGAAGCCTTCTCA TTTTTT TAAGAAGGCTTCTTG GTTTGGTGCTTGTTT TERM 2227 1490157 - 1490186 + r 78 -9.4 -3.59233 | opp_overlap 1490135 1490160, overlap 1490154 1490153 TCCCATTTTTTTTAA GAAGCCTTCTCA TTTTTT TAAGAAGGCTTC TTGGTTTGGTGCTTG pepM 1491037 - 1490240 - | methionyl aminopeptidase M TERM 2228 1490553 - 1490574 + g 71 -8.7 -3.27902 | opp_overlap 1490553 1490550 1490548, overlap 1490551 AATTCACGAACATCA CCGTAGTTG TTTT CAACTTCGG TATATTGTTGGATGA TERM 2229 1491091 - 1491110 + H 75 -9.3 -3.1241 | opp_overlap 1491089, overlap 1491089 1491087 TTGGAACAGTAAATC GACAGCG TTAACC CGCTGTC TATCTTCAATCTCAT LSA1516 1491300 - 1491752 + | flavodoxin TERM 2230 1491911 - 1491929 + F 72 -8.2 -3.56643 | overlap 1491912 TCTTAATCAGGCGGA TTAGCGAT GCA ATCGCTAG TTTGACAAGTGTCGC TERM 2231 1491912 - 1491928 + F 72 -9.5 -2.73771 | overlap 1491911 CTTAATCAGGCGGAT TAGCGAT GCA ATCGCTA GTTTGACAAGTGTCG TERM 2232 1492023 - 1492063 + F 71 -9.1 -3.14132 | overlap 1492025 1492034 TTTGAGCATTAGCTT AATCAGGCGGATTAGCGAT GCA ATCGCTGATTTGACTGATG TTGCTAAGCGCAGAA TERM 2233 1492025 - 1492061 + F 84 -11.7 -3.13403 | overlap 1492023 1492034 TGAGCATTAGCTTAA TCAGGCGGATTAGCGAT GCA ATCGCTGATTTGACTGA TGTTGCTAAGCGCAG TERM 2234 1492034 - 1492052 + F 74 -8.2 -3.71607 | overlap 1492025 1492023 GCTTAATCAGGCGGA TTAGCGAT GCA ATCGCTGA TTTGACTGATGTTGC TERM 2235 1492246 - 1492282 + F 100 -9.5 -5.10656 | TTCAATATTTCCCCA CTGGGTCTAGGGCAA TTCCCTT TTGCTTTGGGCCCAG TTTTCTTATTTTAGT gtcA1 1492332 - 1492814 + | teichoic acid glycosylation protein gtcA2 1492807 - 1493229 + | teichoic acid glycosylation protein TERM 2236 1493478 - 1493462 - g 74 -7.9 -3.91488 | opp_overlap 1493462 1493463, overlap 1493463 AACTTCGGTAAAGAA GCGGCGT TAT ACGCCGG TTTACAAGCTGCAAC TERM 2237 1493477 - 1493463 - g 83 -11.4 -2.94411 | opp_overlap 1493462 1493463, overlap 1493462 ACTTCGGTAAAGAAG CGGCGT TAT ACGCCG GTTTACAAGCTGCAA TERM 2238 1493463 - 1493477 + G 80 -11.4 -2.73124 | opp_overlap 1493463 1493462, overlap 1493462 ACTTCGGTAAAGAAG CGGCGT TAT ACGCCG GTTTACAAGCTGCAA LSA1519 1493231 - 1494163 + | teichoic acid/polysaccharide glycosyl transferase family protein TERM 2239 1494212 - 1494161 - T 100 -19.8 -4.96996 | gap 1, opp_overlap 1494165 1494170, overlap 1494165 1494170 GTTAAAGAAAAGAAA TAATC-AAAAGAGGCGCCACGACAA ATT CTGTCGTAGCGCCTCTTTTAGTTTA TAACATGTTTTAAAA TERM 2240 1494207 - 1494165 - T 100 -23 -3.28719 | opp_overlap 1494165 1494170, overlap 1494161 1494170 AAGAAAAGAAATAAT CAAAAGAGGCGCCACGACAA ATT CTGTCGTAGCGCCTCTTTTA GTTTATAACATGTTT TERM 2241 1494165 - 1494207 + T 100 -17.9 -2.95481 | opp_overlap 1494165 1494161 1494170, overlap 1494170 AAGAAAAGAAATAAT CAAAAGAGGCGCCACGACA AATTC TGTCGTAGCGCCTCTTTTA GTTTATAACATGTTT TERM 2242 1494202 - 1494170 - T 100 -20.7 -4.65969 | opp_overlap 1494170 1494165, overlap 1494165 1494161 AAGAAATAATCAAAA GAGGCGCCACGACAA ATT CTGTCGTAGCGCCTC TTTTAGTTTATAACA TERM 2243 1494170 - 1494202 + T 100 -17.8 -4.61873 | opp_overlap 1494165 1494161 1494170, overlap 1494165 AAGAAATAATCAAAA GAGGCGCCACGACA AATTC TGTCGTAGCGCCTC TTTTAGTTTATAACA mnaA 1495361 - 1494222 - | UDP-N-acetylglucosamine 2-epimerase TERM 2244 1494841 - 1494870 + g 91 -8.1 -4.81212 | gap 1, opp_overlap 1494848, overlap 1494845 TCAATCGCAGTATTC CCAGTAATGAAGAT ATT ATCTTCGTTA-TGG TTTTCTTGTAATAAG LSA1521 1496015 - 1495458 - | TetR family transcriptional regulator pepS 1496180 - 1497412 + | aminopeptidase S TERM 2245 1497523 - 1497506 - g 100 -8.5 -4.86385 | opp_overlap 1497506 1497503 ATTTTCAAAAACAAA CCACTAA GTTA TTAGTGG TCATCTCGTTAATTG LSA1523 1497430 - 1497603 + | hypothetical protein TERM 2246 1497612 - 1497645 + F 100 -11.1 -5.54338 | opp_overlap 1497612 TTTATAATTAAACAA GGATTGGCCCCAAAT TCAT ATTTGGCCCCAATCC TTTTTATTTTCCTTA TERM 2247 1497645 - 1497612 - f 89 -11.1 -4.12296 | opp_overlap 1497612 TTTATAATTAAACAA GGATTGGCCCCAAAT TCAT ATTTGGCCCCAATCC TTTTTATTTTCCTTA LSA1524 1497813 - 1498523 + | hypothetical protein TERM 2248 1498579 - 1498626 + F 100 -13 -5.60993 | opp_overlap 1498592, overlap 1498572 1498571 TTAATCGTTGCCACC GGGCAGTTAATCACTTCT ATAGGTCATAGA AGAAGTGATTGGCTGCCC TTTTTTTATGGCGCG LSA1525 1498665 - 1498985 + | small multidrug resistance efflux protein TERM 2249 1499019 - 1498993 - T 100 -12.4 -5.33405 | opp_overlap 1498993 GTCATTAAACAAAAA TAAGCTTGCCCA CTG TGGGGAAGCTTA TTTTTGTGCTTGTGC TERM 2250 1498993 - 1499019 + T 100 -12.4 -5.01535 | opp_overlap 1498993 GTCATTAAACAAAAA TAAGCTTGCCCA CTG TGGGGAAGCTTA TTTTTGTGCTTGTGC LSA1526 1499361 - 1499017 - | hypothetical protein TERM 2251 1499427 - 1499444 + r 81 -5.5 -5.1675 | opp_overlap 1499427, overlap 1499429 ATGCCAATAAAAAAA GCCCAAC CGAA GTTGGAC TTTTTTGATAAATAA TERM 2252 1499444 - 1499427 - R 100 -7.7 -5.80364 | opp_overlap 1499427 1499429 ATGCCAATAAAAAAA GCCCAAC CGAA GTTGGAC TTTTTTGATAAATAA fba 1500326 - 1499463 - | fructose-bisphosphate aldolase TERM 2253 1500346 - 1500365 + r 81 -7.2 -4.66163 | opp_overlap 1500346, overlap 1500348 AAGCCTCCAGATTAA TTGCAACT TTTT AGTTGCGA TTTTTGAATACGAGT TERM 2254 1500602 - 1500650 + r 80 -9.1 -3.88641 | opp_overlap 1500608, overlap 1500608 1500611 ACGTCCGTATTGACG CAAAAAGAAGAAAATATAGCG TCATTAT CGCTAAACTTTCTTCTTCTTG TTGTTACTATTTATT TERM 2255 1500608 - 1500644 + r 70 -6.7 -4.1157 | opp_overlap 1500608, overlap 1500602 1500611 GTATTGACGCAAAAA GAAGAAAATATAGCG TCATTAT CGCTAAACTTTCTTC TTCTTGTTGTTACTA TERM 2256 1500644 - 1500608 - R 90 -8.9 -4.67353 | opp_overlap 1500602 1500608 1500611 GTATTGACGCAAAAA GAAGAAAATATAGCG TCATTAT CGCTAAACTTTCTTC TTCTTGTTGTTACTA LSA1528 1500974 - 1500801 - | aromatic acid transporter TERM 2257 1500867 - 1500851 - G 75 -5.8 -4.65747 | gap 1, overlap 1500852 CAACTCCGAATAAAA GGACGGC CCCG GCCG-CC ATTAAAATCGCAATC LSA1529 1501996 - 1500983 - | aromatic acid transporter LSA1530 1502596 - 1502069 - | small molecules-binding protein TERM 2258 1502702 - 1502720 + r 72 -8.2 -3.55444 | opp_overlap 1502705, overlap 1502705 GCACCGCTCGGCGAA TAACTGCT GCA AGCAGTTG TTTGACGAGTGACGC TERM 2259 1502705 - 1502717 + r 74 -7.7 -3.91716 | opp_overlap 1502705, overlap 1502702 CCGCTCGGCGAATAA CTGCT GCA AGCAG TTGTTTGACGAGTGA TERM 2260 1502773 - 1502763 - R 76 -3.2 -5.28176 | GCTACTGACAAAAAA CGGT AAA ACCA TCCATATCCGAATAT TERM 2261 1502792 - 1502832 + r 100 -12.8 -5.73563 | opp_overlap 1502796, overlap 1502796 ATATCCGAATATCAA AAAAGACCTAGGACAAAA ATCAC TTTTGTCCTAGGTCTTCA TTTTTTTAATTTAAT TERM 2262 1502828 - 1502796 - R 100 -18.7 -5.27779 | opp_overlap 1502792 1502796 CCGAATATCAAAAAA GACCTAGGACAAAAA TCA CTTTTGTCCTAGGTC TTCATTTTTTTAATT TERM 2263 1502796 - 1502828 + r 100 -18 -4.07651 | opp_overlap 1502796, overlap 1502792 CCGAATATCAAAAAA GACCTAGGACAAAA ATCAC TTTTGTCCTAGGTC TTCATTTTTTTAATT LSA1531 1504286 - 1502838 - | putative beta-glucosidase TERM 2264 1502905 - 1502889 - G 77 -6.5 -4.71426 | TTGGTACCAATAAAA GCTGTCC TTA GGATAGC GATTGAGTTCCTTTT LSA1532 1504724 - 1504302 - | hypothetical protein LSA1533 1505086 - 1504751 - | putative cellobiose-specific phosphotransferasesystem, enzyme IIA TERM 2265 1505351 - 1505375 + r 91 -10.2 -4.35926 | opp_overlap 1505351, overlap 1505355 CGATCAAATAAAAAA GAAACCTTAA CTAAA TTAAGGTTTC TTTTCCGTTTGGGCT TERM 2266 1505375 - 1505351 - R 100 -10.9 -5.68438 | opp_overlap 1505351 1505355 CGATCAAATAAAAAA GAAACCTTAAC TAA ATTAAGGTTTC TTTTCCGTTTGGGCT TERM 2267 1505355 - 1505371 + r 74 -5.2 -4.74598 | opp_overlap 1505351, overlap 1505351 CAAATAAAAAAGAAA CCTTAA CTAAA TTAAGG TTTCTTTTCCGTTTG LSA1534 1506735 - 1505389 - | putative ATP-dependent RNA helicase LSA1535 1507746 - 1506748 - | putative oxidoreductase LSA1536 1507960 - 1508304 + | hypothetical protein TERM 2268 1508348 - 1508388 + T 100 -16.3 -2.70932 | opp_overlap 1508345 1508349 1508362, overlap 1508359 1508360 TCTGAGCATTAACTG AGCGTGCTGAATGACCGAT GAA ATCGGTCGTTTAGTACGCG TGGTTAAGCACAAGA TERM 2269 1508387 - 1508349 - T 87 -13.2 -2.57795 | opp_overlap 1508348 1508359 1508360, overlap 1508345 1508362 CTGAGCATTAACTGA GCGTGCTGAATGACCGAT GAA ATCGGTCGTTTAGTACGC GTGGTTAAGCACAAG TERM 2270 1508359 - 1508377 + T 81 -9.6 -3.73953 | opp_overlap 1508349 1508345 1508362, overlap 1508348 1508360 ACTGAGCGTGCTGAA TGACCGAT GAA ATCGGTCG TTTAGTACGCGTGGT TERM 2271 1508360 - 1508376 + T 79 -10.9 -2.84051 | opp_overlap 1508349 1508345 1508362, overlap 1508359 1508348 CTGAGCGTGCTGAAT GACCGAT GAA ATCGGTC GTTTAGTACGCGTGG TERM 2272 1508464 - 1508435 - T 100 -15.1 -4.15061 | opp_overlap 1508435, overlap 1508438 CAATCCATACATAAA GAAGCCGCCCAAA ATAA TTTGGGCGTCTTC TTTTTTTACCTATTT TERM 2273 1508435 - 1508464 + T 100 -15.1 -5.54264 | opp_overlap 1508435 1508438 CAATCCATACATAAA GAAGCCGCCCAAA ATAA TTTGGGCGTCTTC TTTTTTTACCTATTT TERM 2274 1508461 - 1508438 - T 90 -11 -4.18674 | opp_overlap 1508435, overlap 1508435 TCCATACATAAAGAA GCCGCCCAAA ATAA TTTGGGCGTC TTCTTTTTTTACCTA LSA1537 1508847 - 1508470 - | extracellular protein precursor LSA1538 1509612 - 1508863 - | extracellular glycosyl hydrolase TERM 2275 1509132 - 1509119 - G 71 -9.5 -2.92653 | opp_overlap 1509114 1509119, overlap 1509118 ATGAGCGTCACAAAC CGGGC AATT GCCCG TTGCGTCTTGGCTTT TERM 2276 1509119 - 1509132 + g 72 -9.5 -3.20637 | opp_overlap 1509119 1509118, overlap 1509114 ATGAGCGTCACAAAC CGGGC AATT GCCCG TTGCGTCTTGGCTTT LSA1539 1509758 - 1509952 + | hypothetical protein LSA1540 1509980 - 1510897 + | extracellular protein precursor TERM 2277 1510908 - 1510939 + T 100 -23.2 -4.84527 | opp_overlap 1510908 TATAACATTAAAAAA GAAGCGGCGGACAA ATAT TTGTCCGCCGCTTC TTTTTGATATCTGAA TERM 2278 1510939 - 1510908 - T 100 -23.2 -5.30189 | opp_overlap 1510908 TATAACATTAAAAAA GAAGCGGCGGACAA ATAT TTGTCCGCCGCTTC TTTTTGATATCTGAA LSA1541 1511883 - 1510996 - | putative extracellular lipase/esterase precursor LSA1542 1512949 - 1511876 - | putative phosphotransferase system, enzyme IIC (C-terminal fragment), authentic frameshift TERM 2279 1512396 - 1512376 - G 76 -11.1 -2.5409 | overlap 1512365 AGAAGGCGTAATTTA GGTTAGCCG TTG CGGCAAACC CATCACGGCCAAACT TERM 2280 1512500 - 1512487 - G 77 -3.9 -5.08824 | opp_overlap 1512487 TTCCGAGTGAAAAAA TCAAA CTCG TTTGA TTGGCTTTTAAATTC LSA1543 1513160 - 1512954 - | putative phosphotransferase system, enzyme IIC (N-terminal fragment), authentic frameshift TERM 2281 1513251 - 1513286 + r 100 -12.6 -4.81734 | opp_overlap 1513251 CTAGACCACTAAAAA GGCCGTCTAACCCTCG ATGA TGAGGATTAAACGGCC TTTTTAGTGGTCTTT TERM 2282 1513286 - 1513251 - R 100 -16.3 -4.79223 | opp_overlap 1513251 CTAGACCACTAAAAA GGCCGTCTAACCCTC GATGAT GAGGATTAAACGGCC TTTTTAGTGGTCTTT LSA1544 1514711 - 1513347 - | putative RNA methyltransferase TERM 2283 1514739 - 1514773 + r 70 -6.4 -4.15833 | opp_overlap 1514718 1514739 TTTGTTGTTTAAAAA GAGTCTGAAACAAAAC TGA GTTTTGCGCCGGACTC TTTTCGCCTAATAGT TERM 2284 1514773 - 1514739 - R 90 -8.6 -4.56597 | opp_overlap 1514739, overlap 1514718 TTTGTTGTTTAAAAA GAGTCTGAAACAAAAC TGA GTTTTGCGCCGGACTC TTTTCGCCTAATAGT LSA1545 1515822 - 1514794 - | putative lipid kinase gatB 1517273 - 1515843 - | aspartyl/glutamyl-tRNA amidotransferase subunit B gatA 1518739 - 1517273 - | glutamyl-tRNA amidotransferase, subunit A gatC 1519038 - 1518742 - | glutamyl-tRNA amidotransferase, subunit C TERM 2285 1518999 - 1519023 + g 80 -3.5 -5.28778 | opp_overlap 1519002, overlap 1519002 TGAAAGCTAATTTGG AAAGTTCTGCG ACA TGCTGAACTTG TTTTTTATCAATCAT TERM 2286 1519002 - 1519020 + g 73 -5.2 -4.73105 | opp_overlap 1519002, overlap 1518999 AAGCTAATTTGGAAA GTTCTGCG ACA TGCTGAAC TTGTTTTTTATCAAT TERM 2287 1519689 - 1519663 - g 70 -7.2 -3.87576 | GCACAACAAGCCAAA CAGCACCTGCCG AAA CAGCTGATACTG AAGACGTTGCAACAA TERM 2288 1519941 - 1519924 - g 81 -4.1 -5.25803 | AACCCCTAGAAAAAA TGATCGC ACAT GCTATCA AAGGCCTATAATTAA LSA1549 1519368 - 1519952 + | extracellular protein precursor TERM 2289 1519991 - 1519962 - T 100 -22.3 -5.68023 | opp_overlap 1519962 CTATAATTAAAAAAA GCTCCCGGCAATC AACT GATTGCCGGGAGC TTTTTGAATCTCTTA TERM 2290 1519962 - 1519991 + T 100 -22.3 -4.74453 | opp_overlap 1519962 CTATAATTAAAAAAA GCTCCCGGCAATC AACT GATTGCCGGGAGC TTTTTGAATCTCTTA LSA1550 1521135 - 1520008 - | lipoprotein precursor TERM 2291 1521116 - 1521096 - G 70 -3.9 -4.89477 | overlap 1521098 CTGCTAACAATAAAA GAGTTGCTG CTG CAACGACCC ATATTTTATACTTTG TERM 2292 1521190 - 1521167 - R 81 -9.6 -3.74747 | opp_overlap 1521166 1521165 TTAATTCCGATTAAA GCGCGTTAAA TAAA TTAAACGCGC GCTCTTGGTTATTAT ligA 1523251 - 1521218 - | NAD-dependent DNA ligase TERM 2293 1522090 - 1522133 + g 71 -8.3 -3.53733 | gap 1, opp_overlap 1522090 1522127, overlap 1522081 1522088 AAATTTCAGGGATAA TGTCC-CCTGCTTTATGCAG AAGTA CTGTATCAAGCAAGCGGACA TCTTTATCGCGTAAC TERM 2294 1523342 - 1523324 - R 72 -8.2 -3.56643 | opp_overlap 1523316 1523328 GCGACACTTGTCAAA TCGACGAT TAC ATCGTCAA TTAACCAAGTAATGC TERM 2295 1523599 - 1523567 - R 90 -13.5 -2.91264 | opp_overlap 1523577, overlap 1523574 1523577 CCGGTTAGTTACATA CCGCAAACAACCGGC AAA GCCGGTTATTCACGA TATGCCACTAATCCT TERM 2296 1523592 - 1523574 - R 88 -11 -3.65425 | opp_overlap 1523577, overlap 1523567 1523577 GTTACATACCGCAAA CAACCGGC AAA GCCGGTTA TTCACGATATGCCAC TERM 2297 1523577 - 1523589 + r 82 -10.5 -3.64487 | opp_overlap 1523574 1523567 1523577 ACATACCGCAAACAA CCGGC AAA GCCGG TTATTCACGATATGC TERM 2298 1523589 - 1523577 - R 88 -10.5 -3.9578 | opp_overlap 1523577, overlap 1523574 1523567 ACATACCGCAAACAA CCGGC AAA GCCGG TTATTCACGATATGC pcrA 1526015 - 1523766 - | ATP-dependent DNA helicase TERM 2299 1525852 - 1525865 + g 71 -2.4 -5.13741 | opp_overlap 1525838 1525848 ATGGCTAAAATTCGC CATG GCAATA CATG TTTTTCTTCAATTAA LSA1553 1526189 - 1527013 + | haloacid dehalogenase family hydrolase LSA1554 1527018 - 1527956 + | LacI family transcriptional regulator TERM 2300 1527990 - 1527962 - T 100 -14 -5.60993 | opp_overlap 1527962 TCGCCCATAAAAAAA CGCCTTAACCAT AAATA ACGGTTAAGGCG TTTTTTTGTTTTTAT TERM 2301 1527962 - 1527990 + T 100 -11.8 -6.23317 | opp_overlap 1527962 TCGCCCATAAAAAAA CGCCTTAACCAT AAATA ACGGTTAAGGCG TTTTTTTGTTTTTAT purB2 1529333 - 1528041 - | adenylosuccinate lyase TERM 2302 1528181 - 1528198 + g 70 -2.6 -4.93365 | GGAAATCTTTTTGCT CATCCC ATGCAA GGGCTG TTTTTGGTTGTACCA purK2 1530501 - 1529389 - | phospho ribosylaminoimidazole carboxylase (AIR carboxylase), ATPase subunit TERM 2303 1530633 - 1530620 - R 86 -4.5 -5.60993 | opp_overlap 1530620 TTTCGCACAAAAAAA GACCA TCAC TGGCC TTTTTCAAATTAATT xpt 1531230 - 1530643 - | xanthine phosphoribosyltransferase LSA1558 1532015 - 1531356 - | N-acetylmuramoyl-L-alanine amidase TERM 2304 1531938 - 1531925 - G 86 -5.9 -5.26247 | CCAAAACAAATAAAA CGCCC AGCA GGACG ACTAGCCATTCTGTC LSA1559 1532173 - 1533159 + | putative oxidoreductase TERM 2305 1533178 - 1533212 + T 100 -15.2 -5.09762 | opp_overlap 1533178 GATTAATGATAAAAA GGACTAGGACTAAAAG CAT TTTTTTGTCCTAGTCC TTTTTATGTTGGCCT TERM 2306 1533212 - 1533178 - T 100 -14.5 -4.99861 | opp_overlap 1533178 GATTAATGATAAAAA GGACTAGGACTAAAA GCATT TTTTTGTCCTAGTCC TTTTTATGTTGGCCT LSA1560 1533690 - 1533229 - | GNAT family N-acetyltransferase TERM 2307 1533745 - 1533721 - R 100 -10.8 -5.626 | TAGCCCATAAAAAAA GGACCAACTG ATTGA CAGTTGATCC ACGACTAATATTTAT csp3 1533964 - 1533764 - | cold shock protein CspA family protein TERM 2308 1534143 - 1534157 + H 73 -5.7 -4.62168 | TAAACCGTTTTCTTT GTTCG ATAAC CGAAC TTTTATACTTTCCAT LSA1562 1534275 - 1534913 + | lipoprotein precursor TERM 2309 1534958 - 1534926 - T 100 -15.8 -5.12617 | opp_overlap 1534926 TAATCACTTAAAAAA GAGTCGGGACAAAA GTAAT TTTTGTCCCAACTC TTTTTTATTCGCGCT TERM 2310 1534926 - 1534958 + T 100 -14.3 -5.45652 | opp_overlap 1534926 TAATCACTTAAAAAA GAGTCGGGACAAAAG TAA TTTTTGTCCCAACTC TTTTTTATTCGCGCT LSA1563 1535556 - 1534963 - | integral membrane protein TERM 2311 1535666 - 1535647 - H 100 -10 -5.74122 | opp_overlap 1535647 TAGGACACAAAAAAA CGACACCG CTAA CGGTATCG TTTAACTTGTTATCA TERM 2312 1535647 - 1535666 + H 74 -7.8 -3.87576 | opp_overlap 1535647 TAGGACACAAAAAAA CGACACCG CTAA CGGTATCG TTTAACTTGTTATCA LSA1564 1535857 - 1536318 + | GNAT family N-acetyltransferase TERM 2313 1536324 - 1536361 + T 100 -25.9 -4.87807 | opp_overlap 1536324 ACAAATTTAAAAAAA CAGGCCCTGAGACAAAA TTAT TTTTGTCTCAGGGCCTG TTTTTAATCTCTTAA TERM 2314 1536361 - 1536324 - T 100 -25.9 -5.59564 | opp_overlap 1536324 ACAAATTTAAAAAAA CAGGCCCTGAGACAAAA TTAT TTTTGTCTCAGGGCCTG TTTTTAATCTCTTAA LSA1565 1536852 - 1536397 - | hypothetical protein LSA1566 1539029 - 1536852 - | putative transcription accessory protein, RNA-binding TERM 2315 1537695 - 1537722 + g 73 -9.8 -3.05343 | opp_overlap 1537687 TAAGGGATCTTGTAA GCGCCGTGCGAT ACTA ATCGCACTCCGC TCTTCAACATGTAGA TERM 2316 1537937 - 1537966 + g 71 -9.2 -2.92475 | overlap 1537936 1537934 1537936 1537939 GCTTGAATTCATCGG CAGCTGCTGCTC GTTTAG GCGCTGCAGCTG GTTTATGCGGATAGA TERM 2317 1539082 - 1539062 - R 91 -4.6 -5.7946 | TCTTCAATAAAAAAA CAGCACCC GTCTT GGGAACTG TCATGAGTTGATCTA LSA1567 1539529 - 1539095 - | hypothetical protein TERM 2318 1539589 - 1539603 + r 78 -8.6 -3.75332 | opp_overlap 1539588, overlap 1539581 ATCGGCTTGCAAGAG TGCGTT TGA AACGCA TTTGACTTCGAGCAT TERM 2319 1539654 - 1539636 - R 82 -10.4 -3.53444 | opp_overlap 1539636 1539639, overlap 1539639 GCATCGTGTTGCAAA TAACCGAT ATA ATCGGTTA TTTGCAATACGTCGC TERM 2320 1539636 - 1539654 + r 82 -10.4 -3.61178 | opp_overlap 1539636 1539639, overlap 1539639 GCATCGTGTTGCAAA TAACCGAT ATA ATCGGTTA TTTGCAATACGTCGC TERM 2321 1539639 - 1539651 + r 74 -7.7 -3.94188 | opp_overlap 1539639 1539636, overlap 1539636 TCGTGTTGCAAATAA CCGAT ATA ATCGG TTATTTGCAATACGT TERM 2322 1539651 - 1539639 - R 74 -7.7 -3.90744 | opp_overlap 1539636 1539639, overlap 1539636 TCGTGTTGCAAATAA CCGAT ATA ATCGG TTATTTGCAATACGT TERM 2323 1539764 - 1539722 - R 95 -13 -4.08689 | opp_overlap 1539722 1539718 1539725, overlap 1539725 CAGGTAACAATTAAA TAAGGCACCAAGGACAAAAA TAA CTTTTGTCGTTAGTACCTTA TTCGTTCTATTTCTT TERM 2324 1539761 - 1539725 - R 89 -10.3 -4.15577 | opp_overlap 1539725 1539722 1539718, overlap 1539722 GTAACAATTAAATAA GGCACCAAGGACAAAAA TAA CTTTTGTCGTTAGTACC TTATTCGTTCTATTT LSA1568 1542477 - 1539814 - | putative calcium-transporting P-type ATPase TERM 2325 1542554 - 1542518 - R 100 -12.5 -5.40072 | TTGGGGGTAAAAAAA GAGACCTACAGGAATTC TAA AAATCCCTATAAGTCTC ACTAATTAAGATAAC TERM 2326 1542892 - 1542856 - R 82 -10.3 -3.53012 | opp_overlap 1542856, overlap 1542865 CTGTGCTTTGCTAAA CTTATCAAACCGGTGAT TTC ATCACCAATTCGCTAAG TTCTGCAAATGCTCA TERM 2327 1543007 - 1542989 - R 72 -8.2 -3.55444 | opp_overlap 1542992, overlap 1542992 GCGTCACTCGTCAAA CAACTGCT TAC AGCAGTTA TTCGCCGAGCTGTGC TERM 2328 1543004 - 1542992 - R 74 -7.7 -3.91716 | opp_overlap 1542992, overlap 1542989 TCACTCGTCAAACAA CTGCT TAC AGCAG TTATTCGCCGAGCTG nadE 1544014 - 1543187 - | NAD synthetase nadC 1545509 - 1544046 - | nicotinate phosphoribosyltransferase tagA 1545608 - 1546336 + | N-acetylglucosamyldiphospho-undecaprenol-N- acetyl-beta-D-mannosaminyltransferase (teichoic acid biosynthesis protein A) TERM 2329 1546342 - 1546375 + T 100 -11.2 -5.83211 | opp_overlap 1546342 GAAAAACTAAAAAAA GCATTGAAGACAAA CTTAAT TTTGCCTTCAATGC TTTTTTATTTTGATA TERM 2330 1546375 - 1546342 - T 100 -13.4 -5.85011 | opp_overlap 1546342 GAAAAACTAAAAAAA GCATTGAAGACAAA CTTAAT TTTGCCTTCAATGC TTTTTTATTTTGATA TERM 2331 1546403 - 1546417 + T 73 -2.1 -5.28778 | ATAATCGTTTTAATG TTCGG CTGTA CTGAA TTTTTTCTAAATAGT LSA1572 1547333 - 1546380 - | teichoic acid/polysaccharide glycosyl transferase family protein LSA1573 1548430 - 1547354 - | putative teichoic acid/polysaccharide glycosyl transferase, group 1 tagD 1548839 - 1548453 - | glycerol-3-phosphate cytidyltransferase (CDP-glycerol pyrophosphorylase) (teichoic acid biosynthesis protein D) LSA1575 1550261 - 1548846 - | putative teichoic acid/polysaccharide export protein tagB 1551408 - 1550263 - | CDP-glycerol:glycerophosphate glycerophosphotransferase (teichoic acid biosynthesis protein B) TERM 2332 1551066 - 1551051 - G 100 -9 -4.84017 | opp_overlap 1551051 AAGTTTGCACAAAAA CCCCAT TTTT ATGGGG TTTTAGACGGAATGG TERM 2333 1551051 - 1551066 + g 83 -9 -4.08216 | opp_overlap 1551051 AAGTTTGCACAAAAA CCCCAT TTTT ATGGGG TTTTAGACGGAATGG TERM 2334 1551332 - 1551319 - G 75 -2.4 -5.3236 | AGAATTGATAAAAAA TGTC TCGTCT GACA TCGGAGTGACTAATT LSA1577 1552945 - 1551386 - | hypothetical protein TERM 2335 1552054 - 1552068 + g 70 -7.8 -3.73068 | opp_overlap 1552056 CTTGTGTCTTTTGAA CAGCCG TAT CGGTTG TTGTTCGGTTAAACA TERM 2336 1552900 - 1552918 + g 95 -4.6 -5.80248 | opp_overlap 1552891 1552901, overlap 1552901 AAAACGGTTGTAGCA ACACTAAT AAA ATTAGTGA TTTTTTTGTATATTC TERM 2337 1552901 - 1552917 + g 74 -8.1 -4.05708 | opp_overlap 1552901, overlap 1552900 AAACGGTTGTAGCAA CACTAAT AAA ATTAGTG ATTTTTTTGTATATT LSA1578 1553812 - 1552964 - | putative teichoic acid/polysaccharide biosynthesis protein LSA1579 1555391 - 1553850 - | putative teichoic acid/polysaccharide export protein LSA1580 1556896 - 1555445 - | integral membrane protein TERM 2338 1555984 - 1555994 + g 70 -5.4 -4.45168 | ACCCTAATACAAATT TCCA AGT TGGA TTTCTATTTTCCAGC TERM 2339 1557031 - 1557076 + r 100 -17.3 -5.17507 | gap 1, opp_overlap 1557031 TTCGATATTAAAAAA GCTTCAAGAAGAGATAA-TCAC AAT GTGAATTATGTCTTCTTGAAGC TTTTTATTAAATTTT TERM 2340 1557076 - 1557031 - R 100 -17.3 -5.21709 | gap 1, opp_overlap 1557031 TTCGATATTAAAAAA GCTTCAAGAAGAGATAA-TCAC AAT GTGAATTATGTCTTCTTGAAGC TTTTTATTAAATTTT LSA1581 1559174 - 1557090 - | putative teichoic acid-binding N-acetylmuramoyl L-alalanine amidase (cell wall hydrolase) LSA1582 1559456 - 1559220 - | putative small cell surface protein precursor LSA1583 1559884 - 1559459 - | hypothetical protein LSA1584 1561522 - 1559978 - | putative teichoic acid/polysaccharide glycosyl transferase TERM 2341 1561580 - 1561545 - R 82 -7.8 -4.38712 | gap 1, opp_overlap 1561545 1561549 1561578, overlap 1561549 CCCACTCCCATAAAA TAAAGGCCCTAGA-ATT TTT AACATCTACGGCCTTTA TTGATTTTCGAAAAA TERM 2342 1561576 - 1561549 - R 71 -4.2 -4.77173 | gap 1, opp_overlap 1561545 1561549, overlap 1561545 CTCCCATAAAATAAA GGCCCTAGA-ATT TTT AACATCTACGGCC TTTATTGATTTTCGA LSA1585 1563635 - 1561596 - | putative teichoic acid/polysaccharide phosphoglycerol transferase TERM 2343 1563969 - 1564007 + r 100 -19.1 -4.57837 | opp_overlap 1563969 TATGCAAACAAAAAA GGAAGACGACAGCAGAT TTATT ATCTACTGTCGTCTTCC TTTTTAGCAGCCTAT TERM 2344 1564007 - 1563969 - R 100 -21.3 -5.65927 | opp_overlap 1563969 TATGCAAACAAAAAA GGAAGACGACAGCAGAT TTATT ATCTACTGTCGTCTTCC TTTTTAGCAGCCTAT LSA1587 1564720 - 1564019 - | GntR family transcriptional regulator TERM 2345 1564044 - 1564070 + g 79 -10.8 -3.0752 | opp_overlap 1564044 1564043 1564037 AAATAAAATTCAAAT CGTTCGCCCACG TAT TGTGTGCGGACG TATTCAAATGGTGTG nagA 1565878 - 1564739 - | N-acetylglucosamine-6-phosphate deacetylase TERM 2346 1565216 - 1565250 + g 80 -10.1 -3.65514 | opp_overlap 1565216 1565217 1565220, overlap 1565212 1565218 TTCACGGTGCTTAAA TTCACGTTGCGCATT GTATA AATGCGTAACGTGTG TTGCTTTACTTTCAA TERM 2347 1565218 - 1565248 + g 100 -14.9 -3.39643 | opp_overlap 1565217 1565216 1565220, overlap 1565216 1565212 CACGGTGCTTAAATT CACGTTGCGCATT GTATA AATGCGTAACGTG TGTTGCTTTACTTTC TERM 2348 1566809 - 1566832 + G 70 -7.4 -3.86822 | ACATTAGTTACTCGT GGCTTTGACC CAAT GATCAAGGCC TTTATCACAGCCTTA LSA1589 1566020 - 1566940 + | putative oxidoreductase TERM 2349 1566957 - 1566977 + T 100 -14.1 -5.04175 | opp_overlap 1566957 AATATATAGAAAAAA GCCAATCAC AAT GTGATTGGC TTTTTGTGTGCTTAG TERM 2350 1566977 - 1566957 - T 100 -14.1 -5.46276 | opp_overlap 1566957 AATATATAGAAAAAA GCCAATCAC AAT GTGATTGGC TTTTTGTGTGCTTAG proC 1567854 - 1567048 - | pyrroline-5-carboxylate reductase TERM 2351 1567241 - 1567260 + g 72 -6.4 -4.3255 | opp_overlap 1567233 CCTAAAACAGCTTGG GCTGCGAT TTCA GTTGCAGC TTTCTTGGTTAAACC TERM 2352 1567341 - 1567325 - G 76 -8 -4.17109 | overlap 1567337 AATAAGTAAACGAAA GCTGGT GAACT ACCAGC AAGCGCGCTGAAAGT TERM 2353 1567966 - 1567936 - R 100 -14.1 -5.05782 | opp_overlap 1567936 ATCTATCCTAAAAAA GCGTCCGGCAAAA TTGAC TTTTGTCGGACGC TTTCTCATTTAAAAT TERM 2354 1567936 - 1567966 + r 100 -16.3 -4.14056 | opp_overlap 1567936 ATCTATCCTAAAAAA GCGTCCGGCAAAA TTGAC TTTTGTCGGACGC TTTCTCATTTAAAAT srtA2 1568571 - 1567975 - | putative surface protein transpeptidase 2 (sortase 2) TERM 2355 1568997 - 1569026 + r 91 -5.9 -5.52384 | gap 1 TATCAATAATCCGCG CACGC-TTATTC TATAAAT GAATAAAGCGTG TTTTTTTACTCACAA TERM 2356 1569047 - 1569069 + r 76 -9.9 -3.10641 | gap 1, opp_overlap 1569047, overlap 1569068 TTACTCACAAAAAAA GCGGACCGAC AATT GTCGGTC-GC TTACCTGATAAATTA TERM 2357 1569069 - 1569047 - R 100 -9.9 -5.64274 | gap 1, opp_overlap 1569047 1569068 TTACTCACAAAAAAA GCGGACCGAC AATT GTCGGTC-GC TTACCTGATAAATTA TERM 2358 1569353 - 1569327 - R 88 -3.1 -5.91981 | overlap 1569328 AAAATGCAAAAAAAA CCTCGATTATT GTATA AATAACCAAGA TTTCTTTTAATTGAT dtpT 1570829 - 1569369 - | di-/tripeptide:H(+) symporter LSA1593 1571243 - 1571827 + | nucleotide diphosphate NUDIX family hydrolase TERM 2359 1571868 - 1571825 - T 74 -9.8 -2.75066 | opp_overlap 1571830 1571833, overlap 1571830 AATAACCGCTTAAAC TAAAATAAGACATTGTTTCC ATTT GGAAGCAACGTCTCATTTTT TATCCTATTAAGCGG TERM 2360 1571830 - 1571863 + T 95 -7.5 -5.36965 | opp_overlap 1571825 1571830, overlap 1571833 CCGCTTAAACTAAAA TAAGACATTGTTTCC ATTT GGAAGCAACGTCTCA TTTTTTATCCTATTA TERM 2361 1571863 - 1571830 - T 91 -9.7 -4.54727 | opp_overlap 1571830 1571833, overlap 1571825 CCGCTTAAACTAAAA TAAGACATTGTTTCC ATTT GGAAGCAACGTCTCA TTTTTTATCCTATTA TERM 2362 1571833 - 1571860 + T 76 -9.2 -3.46407 | opp_overlap 1571830 1571825, overlap 1571830 CTTAAACTAAAATAA GACATTGTTTCC ATTT GGAAGCAACGTC TCATTTTTTATCCTA TERM 2363 1571922 - 1571894 - T 100 -8.2 -5.45652 | opp_overlap 1571897 AGCGGTAATAAAAAA GCACTGTTAGTC TTAAC GACTGACAATGC TTAACAAGAATCACA TERM 2364 1572135 - 1572116 - T 91 -5 -5.79595 | opp_overlap 1572116, overlap 1572120 GCCGAAAATAAAAAA CGATTGAA GGGT CTCAACCG CTCATTTTATTACTC TERM 2365 1573683 - 1573711 + T 71 -5.2 -4.57482 | overlap 1573680 1573686 GGATATTCTCCTCGA CCACCTGTGTCG GTTTA CGGTACGGGTAG TTTATTTCTCACTAG TERM 2366 1575058 - 1575077 + T 88 -10.8 -3.66803 | opp_overlap 1575057 1575056 1575066 TTCTGTCCTACAACC CCAAGAAG CAAG CTTCTTGG TTTGGGCTCTTCCCC TERM 2367 1575523 - 1575501 - T 71 -4.9 -4.56978 | opp_overlap 1575518, overlap 1575502 TTTTCAAAGAACAAA GTTTGAGAG TAGAC CTCTCAAAA CTAAACAAAGTTTTG TERM 2368 1575522 - 1575502 - T 70 -8.4 -3.33464 | opp_overlap 1575518, overlap 1575501 TTTCAAAGAACAAAG TTTGAGAG TAGAC CTCTCAAA ACTAAACAAAGTTTT TERM 2369 1575593 - 1575612 + T 72 -9.2 -2.65808 | opp_overlap 1575584 1575581, overlap 1575590 1575590 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 2370 1576926 - 1576946 + T 82 -7.6 -4.42619 | gap 1, overlap 1576929 AAACCATCTTTCAAC CCT-GCACC ATGC GGTGCTAGG TTTTATGCGGTATTA TERM 2371 1577586 - 1577609 + T 81 -3.8 -5.59564 | opp_overlap 1577591, overlap 1577591 CGAAAATTGCACAAA AAAAACGCCT TTTC AGGCGTTTAA TTTTTTTAAATTTCT TERM 2372 1577604 - 1577591 - T 100 -8.1 -5.94713 | opp_overlap 1577586 1577591 ATTGCACAAAAAAAA CGCCT TTTC AGGCG TTTAATTTTTTTAAA TERM 2373 1577591 - 1577604 + T 86 -8.1 -4.5187 | opp_overlap 1577591, overlap 1577586 ATTGCACAAAAAAAA CGCCT TTTC AGGCG TTTAATTTTTTTAAA lysS 1579132 - 1577615 - | lysyl-tRNA synthetase LSA1595 1580194 - 1579208 - | putative dihydrouridine synthetase hslO 1581156 - 1580278 - | HSP33 family molecular chaperone TERM 2374 1581050 - 1581060 + g 81 -5.4 -5.24416 | GCTGATGATGTGGGC CATG TAT CATG TTTTTCTTGTGCTTC TERM 2375 1581212 - 1581189 - R 89 -7.5 -4.9792 | gap 1, opp_overlap 1581184 1581189 TATTTGATACAAAAA GGTCGACCAC TAATC GTG-TCGACC TTTTCATTATAACCG TERM 2376 1581189 - 1581212 + r 82 -7.5 -4.48987 | gap 1, opp_overlap 1581189, overlap 1581184 TATTTGATACAAAAA GGTCGACCAC TAATC GTG-TCGACC TTTTCATTATAACCG ftsH 1583341 - 1581251 - | ATP-dependent zinc metalloendopeptidase FtsH (cell division protein FtsH) hpt 1583975 - 1583430 - | hypoxanthine phosphoribosyltranferase LSA1599 1585394 - 1584015 - | ATPase TERM 2377 1585106 - 1585127 + g 81 -10.9 -3.28924 | opp_overlap 1585111, overlap 1585109 1585111 CTCGAGCTGCCGCCT CAATACCCG TTTG CGGGTGTTG TTGTAGCGGCCAATG TERM 2378 1585411 - 1585469 + r 90 -12.2 -3.52321 | opp_overlap 1585412 1585416, overlap 1585412 1585412 1585418 TTAATCCTCCTTCAA -ATGAATAGAGGTTGGGTCAAAAGTCTA TTCAC TAAACTTTCGACCCAACCTCTAT-CATG ATTTTTGATTAACTA TERM 2379 1585467 - 1585412 - R 100 -21.7 -3.53761 | gap 1, opp_overlap 1585411 1585412 1585412 1585418, overlap 1585416 TAATCCTCCTTCAAA TGAATAGAGGTTGGGTCAAAAGTCTA TTCAC TAAACTTTCGACCCAACCTCTAT-CA TGATTTTTGATTAAC TERM 2380 1585412 - 1585470 + r 80 -6.4 -4.88407 | gap 2, opp_overlap 1585412 1585416, overlap 1585412 1585411 1585418 TAATCCTCCTTCAAA TGA--ATAGAGGTTGGGTCAAAAGTCTA TTCAC TAAACTTTCGACCCAACCTCTATCATGA TTTTTGATTAACTAC TERM 2381 1585412 - 1585467 + r 100 -17.3 -3.32518 | gap 1, opp_overlap 1585412 1585416, overlap 1585411 1585412 1585418 TAATCCTCCTTCAAA TGAATAGAGGTTGGGTCAAAAGTCTA TTCAC TAAACTTTCGACCCAACCTCTAT-CA TGATTTTTGATTAAC TERM 2382 1585464 - 1585416 - R 100 -23.6 -3.51232 | opp_overlap 1585412 1585411 1585412 1585418, overlap 1585412 CCTCCTTCAAATGAA TAGAGGTTGGGTCAAAAGTCTA TTCAC TAAACTTTCGACCCAACCTCTA TCATGATTTTTGATT TERM 2383 1585418 - 1585462 + r 100 -17.4 -2.94225 | opp_overlap 1585416 1585412, overlap 1585412 1585411 1585412 TCCTTCAAATGAATA GAGGTTGGGTCAAAAGTCTA TTCAC TAAACTTTCGACCCAACCTC TATCATGATTTTTGA LSA1600 1585921 - 1585478 - | hypothetical protein LSA1601 1586440 - 1586042 - | hypothetical protein TERM 2384 1586575 - 1586520 - R 83 -8.8 -4.35461 | gap 2, opp_overlap 1586522 CCAATATCACGAAAA TAGGCGATATTAGTGA-TTA-TCC TTAACAAATT GGACTAAACCACTAATATCGCCTA TTAAAAGACCTTATT LSA1602 1586852 - 1586586 - | hypothetical protein LSA1603 1588445 - 1586862 - | putative drug:Na(+) antiporter (drug efflux pump) mfd 1592003 - 1588482 - | transcription-repair coupling factor TERM 2385 1591709 - 1591686 - G 70 -5.3 -4.56775 | opp_overlap 1591686 1591684 ACCCGTCGCCAAAAA GCTCAACGT TCGTAC ACGTTCAGC TCTTGATTCCGGTGA TERM 2386 1592141 - 1592102 - R 81 -8.8 -4.08307 | gap 1, opp_overlap 1592068 1592099 1592102, overlap 1592068 1592111 TCAAAATCTAAACAA GCACTAAAAGCAC-TCTAA TTT TTAAACGTGCCATTAGTGC TAGATTTCTGCGCCT TERM 2387 1592191 - 1592173 - R 72 -8.2 -3.61178 | opp_overlap 1592176, overlap 1592176 GCTACGCATCGTAAA CAATCGGT TGC ACCGATTA TTCACGATACTAGGC TERM 2388 1592188 - 1592176 - R 74 -7.7 -3.94188 | opp_overlap 1592176, overlap 1592173 ACGCATCGTAAACAA TCGGT TGC ACCGA TTATTCACGATACTA pth 1592799 - 1592242 - | peptidyl-tRNA hydrolase ldh 1593030 - 1594007 + | L-lactate dehydrogenase TERM 2389 1594031 - 1594064 + T 100 -9.6 -5.25893 | opp_overlap 1594031 ATTGCTGATCAAAAA GGGATCAGGACAAA TTAATT TTTGCCCTGACCCC TTTTTTAATGTCTCT TERM 2390 1594064 - 1594031 - T 100 -14 -4.7254 | opp_overlap 1594031 ATTGCTGATCAAAAA GGGATCAGGACAAA TTAATT TTTGCCCTGACCCC TTTTTTAATGTCTCT LSA1607 1594501 - 1594082 - | MarR family transcriptional regulator TERM 2391 1594335 - 1594345 + g 81 -5.4 -5.18297 | overlap 1594330 AAGAAAACAGCGAGT TCAC TTG GTGA TTTTCTTTCTTCTTC TERM 2392 1594844 - 1594824 - H 74 -8.5 -3.78679 | opp_overlap 1594824, overlap 1594813 AAAATATTAACACAA GATATTAAT ACT ATTAATATC TTTATTTAGTTTTTA TERM 2393 1594824 - 1594844 + H 88 -8.5 -4.71307 | opp_overlap 1594813 1594824 AAAATATTAACACAA GATATTAAT ACT ATTAATATC TTTATTTAGTTTTTA LSA1608 1595161 - 1596540 + | extracellular protein precursor TERM 2394 1596555 - 1596594 + F 95 -8.1 -4.72333 | gap 1, opp_overlap 1596555 AAACAACTTAAAAAA GGTCCTAAAAAG-CAATT CATAC GGTTGTCTTTTTAGGGCC TTTTTAAATCTCATT TERM 2395 1596594 - 1596555 - f 76 -4.5 -5.23016 | gap 1, opp_overlap 1596555 AAACAACTTAAAAAA GGTCCTAAAAAG-CAA TTCATACGG TTGTCTTTTTAGGGCC TTTTTAAATCTCATT LSA1609 1596722 - 1597402 + | hypothetical protein TERM 2396 1597413 - 1597445 + T 100 -22.3 -4.88228 | opp_overlap 1597413 TTTAAACTAAAAAAA GAGCTGCGACAAAAA TCA TTTTTGTCGCAGCTC TTTTTGCTATTAAAT TERM 2397 1597445 - 1597413 - T 100 -22.3 -5.72207 | opp_overlap 1597413 TTTAAACTAAAAAAA GAGCTGCGACAAAAA TCA TTTTTGTCGCAGCTC TTTTTGCTATTAAAT LSA1610 1597976 - 1597455 - | integral membrane protein TERM 2398 1598103 - 1598081 - R 100 -12.8 -5.65496 | opp_overlap 1598095 TATCAAAAAGAAAAA GCCTCAGACA CCT TGTCTGAGAC TCTCGCACTAACTTA LSA1611 1598479 - 1598123 - | DNA-binding protein PemK family LSA1612 1598769 - 1598503 - | hypothetical protein alr 1599993 - 1598851 - | alanine racemase acpS 1600350 - 1599997 - | Holo-[acyl-carrier protein] synthase (Holo-ACP synthase) (4'-phosphopantetheine transferase AcpS) TERM 2399 1600472 - 1600443 - R 100 -15.1 -4.37502 | opp_overlap 1600445 ATCATGATATGAAAA TAGCGCCCCACCA AAAT TGGTAGGACGCTA TTAAACGTTAATTAT TERM 2400 1600445 - 1600470 + r 70 -8.9 -3.07005 | opp_overlap 1600443 CATGATATGAAAATA GCGCCCCACCA AAAT TGGTAGGACGC TATTAAACGTTAATT LSA1615 1602076 - 1600484 - | putative ATP-dependent RNA helicase murF 1603726 - 1602350 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase TERM 2401 1603700 - 1603719 + g 70 -5.1 -4.43213 | CGCACCAGTCATCCG TGCAATT TCGCTC AATTGCA TTTTCATATCTTAAA LSA1617 1605128 - 1603890 - | hypothetical protein TERM 2402 1604595 - 1604572 - G 71 -2.3 -5.09426 | overlap 1604573 GCTAATTGTAAAAAA TGGTGCGCA TCTAGC TGTGCACCC AACTGCATCAAAACT TERM 2403 1605195 - 1605227 + r 81 -8.6 -4.17023 | gap 1, opp_overlap 1605197, overlap 1605197 AGTTTCACACAAAAA AAGACTGATCAGCAA ACAA TTGC-GATCAGTCTC TTTTAAGCTAATTAA TERM 2404 1605225 - 1605197 - R 100 -11.2 -5.71712 | gap 1, opp_overlap 1605197 1605195 TTTCACACAAAAAAA GACTGATCAGCAA ACAA TTGC-GATCAGTC TCTTTTAAGCTAATT TERM 2405 1605197 - 1605225 + r 88 -11.2 -3.68036 | gap 1, opp_overlap 1605197, overlap 1605195 TTTCACACAAAAAAA GACTGATCAGCAA ACAA TTGC-GATCAGTC TCTTTTAAGCTAATT htpX 1606148 - 1605249 - | heat shock protein HtpX TERM 2406 1605572 - 1605546 - G 73 -5.8 -4.41817 | overlap 1605552 TAAAAGAATTGAAAA GACTAAGGCAAT CAC ATTGCCTGCGCC ACCTTCGCGGTCATC TERM 2407 1605566 - 1605552 - G 71 -8.6 -3.55453 | overlap 1605546 AATTGAAAAGACTAA GGCAAT CAC ATTGCC TGCGCCACCTTCGCG LSA1619 1606728 - 1606162 - | LemA family protein TERM 2408 1607375 - 1607387 + G 78 -9.1 -3.88291 | opp_overlap 1607374 1607373 1607370 GCTGAACAATTAATG GCGCT ACT AGCGC TTTATGAGGCTGATA LSA1620 1606880 - 1607620 + | hypothetical protein LSA1621 1607647 - 1608900 + | putative drug:H(+) antiporter TERM 2409 1608957 - 1608975 + G 73 -8.2 -3.66356 | opp_overlap 1608947 1608960, overlap 1608958 ACAGAGAGTGGCGAA TGATTGCT GAC AGCAATCG TTTGACATTCGGCGT TERM 2410 1608958 - 1608974 + G 70 -9.5 -2.79492 | opp_overlap 1608947 1608960, overlap 1608957 CAGAGAGTGGCGAAT GATTGCT GAC AGCAATC GTTTGACATTCGGCG TERM 2411 1609046 - 1609091 + G 100 -23.7 -3.04517 | opp_overlap 1609051, overlap 1609051 AAAAATTTGACTAAT AAAAAGGGCGCTAAGACAAAA TCAC TTTTGTCTTAGCGCCCTTTTA CTTTTAGAAACGCGT TERM 2412 1609086 - 1609051 - g 100 -23.6 -5.1356 | opp_overlap 1609046 1609051 TTTGACTAATAAAAA GGGCGCTAAGACAAAA TCAC TTTTGTCTTAGCGCCC TTTTACTTTTAGAAA TERM 2413 1609051 - 1609086 + G 100 -23.6 -4.67038 | opp_overlap 1609051, overlap 1609046 TTTGACTAATAAAAA GGGCGCTAAGACAAAA TCAC TTTTGTCTTAGCGCCC TTTTACTTTTAGAAA LSA1622 1608956 - 1609081 + | hypothetical protein LSA1623 1609893 - 1609216 - | integral membrane protein LSA1624 1610535 - 1609906 - | integral membrane protein LSA1625 1610634 - 1611035 + | hypothetical protein TERM 2414 1611414 - 1611374 - g 79 -6.9 -4.60041 | opp_overlap 1611412, overlap 1611382 ATCTATTTTTAAAAA TCGAACAATGGTGTCAG TGGCTTG CCGACACCATTCACCGA CCAGTTTTACTCGCC TERM 2415 1611406 - 1611382 - g 72 -7.9 -3.85159 | overlap 1611374 TTAAAAATCGAACAA TGGTGTCAG TGGCTTG CCGACACCA TTCACCGACCAGTTT LSA1626 1611028 - 1611852 + | integral membrane protein TERM 2416 1611886 - 1611861 - T 100 -15.5 -4.2573 | opp_overlap 1611861 TAAATAACCGCAAAA GGCCCGATTGA ACGT CCAATCGGGCC TTTTTTTGTGCAAAA TERM 2417 1611861 - 1611886 + T 100 -14.8 -5.60993 | opp_overlap 1611861 TAAATAACCGCAAAA GGCCCGATTG AACGTC CAATCGGGCC TTTTTTTGTGCAAAA TERM 2418 1611925 - 1611907 - T 100 -11 -6.06723 | TTGTGCAAAAAAAAA CCAGGGAA AAA TTCCCCGG TTCCAAAATAATTAT rpmE2 1612200 - 1611937 - | 50S ribosomal protein L31 type B murA2 1613614 - 1612355 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase II TERM 2419 1613928 - 1613949 + r 100 -10.1 -5.1963 | opp_overlap 1613928 CAGTGGACAAAAAAA CTCGGCCCA CAAA TGAGCCGAG TTTTTATTAATTACA TERM 2420 1613949 - 1613928 - R 100 -12.3 -5.626 | opp_overlap 1613928 CAGTGGACAAAAAAA CTCGGCCCA CAAA TGAGCCGAG TTTTTATTAATTACA pyrG 1615552 - 1613960 - | CTP synthetase TERM 2421 1615656 - 1615624 - H 100 -20.1 -5.84011 | opp_overlap 1615627 AACAAAAAACAAAAA CAAGCTCCCTATTCA AAA TGAACAGGGAGCTTG TTAACCGATTCTGGC TERM 2422 1615627 - 1615653 + H 100 -13.8 -3.63837 | opp_overlap 1615624 AAAAAACAAAAACAA GCTCCCTATTCA AAA TGAACAGGGAGC TTGTTAACCGATTCT TERM 2423 1615867 - 1615881 + G 72 -7.1 -4.07568 | opp_overlap 1615876 1615878 GATATCGGTGGTTCG GCCGT TAAAT ACGGC TTTTGGACGGCCCAA TERM 2424 1615912 - 1615900 - g 86 -7.7 -4.58395 | overlap 1615878 1615876 TGGACGGCCCAAAAA CTCGA AGA TCGAG AACAGTTTCCAACAC LSA1630 1615819 - 1616754 + | ROK family sugar kinase TERM 2425 1616800 - 1616765 - T 100 -17.9 -5.54192 | opp_overlap 1616765 ACTAATCTAAAAAAA GAGGTACTAAGACAA GTCGTT TTGTCTTAGTACCTC TTTTTTACGTTGACT TERM 2426 1616765 - 1616800 + T 100 -18.6 -5.16572 | opp_overlap 1616765 ACTAATCTAAAAAAA GAGGTACTAAGACAAG TCGT TTTGTCTTAGTACCTC TTTTTTACGTTGACT rpoE 1617437 - 1616829 - | DNA-directed RNA polymerase subunit delta TERM 2427 1617386 - 1617398 + g 72 -6.3 -4.30308 | TTGCGTGAGCGACTT CTATC ATT GATAG TTCTTCTTTATTTTG LSA1632 1617921 - 1617481 - | hypothetical protein TERM 2428 1617512 - 1617533 + g 71 -6.7 -4.08546 | gap 1, opp_overlap 1617515 1617519, overlap 1617508 AATCGTAATTTGTAA TCA-CCAACA ACC TGTTGGCTGA TTTCTAATTGATAAT TERM 2429 1618281 - 1618237 - g 70 -2.7 -5.07567 | GGACACTCGAAAAAA CAGTCATCTTAGGCATGATGG ATA CCAAATTGCCTGAATTGACCG CTGCTACTGATCAAT LSA1633 1618074 - 1618916 + | hypothetical protein TERM 2430 1619604 - 1619628 + G 85 -9.3 -4.16943 | CCAACGGCATGCACG CGGTTGAAGAT TAT ATCGTCAGCCG TTTTCAAATGTACCA LSA1634 1618931 - 1620289 + | putative metal-dependent phosphohydrolase LSA1635 1620305 - 1621126 + | HAD superfamily hydrolase TERM 2431 1621447 - 1621431 - g 71 -3 -5.00884 | ATCGTTTGGAAAAAA GAAAGC CACAC ACTTTC GAACATGCTGACCCT LSA1636 1621368 - 1622201 + | hypothetical protein TERM 2432 1622208 - 1622227 + T 100 -13.6 -5.67967 | opp_overlap 1622208 CTTAATTAAAAAAAA GGACCGAC AATT GTCGGTCC TTTTTTTATGCTCGT TERM 2433 1622227 - 1622208 - T 100 -13.6 -5.95166 | opp_overlap 1622208 CTTAATTAAAAAAAA GGACCGAC AATT GTCGGTCC TTTTTTTATGCTCGT LSA1637 1622964 - 1622233 - | hypothetical protein LSA1638 1623140 - 1623538 + | putative large conductance mechanosensitive channel TERM 2434 1623563 - 1623597 + T 100 -13.1 -4.70659 | gap 1, opp_overlap 1623563 CACACCATGAAATAA GGAGCTGG-GACAAAA GTAA TTTTGTCTTCAGCTCC TTTTTCGATATCCGA TERM 2435 1623597 - 1623563 - T 89 -10.9 -4.03811 | gap 1, opp_overlap 1623563 CACACCATGAAATAA GGAGCTG-GGACAAAA GTAA TTTTGTCTTCAGCTCC TTTTTCGATATCCGA TERM 2436 1623665 - 1623629 - T 81 -8.8 -4.0942 | opp_overlap 1623628 1623627 TATTGATGATATAAA CGTGTTCTATAAGTCA TATCC CGACTTATGGCACACG CCCTTTTTTAATTAC LSA1639 1624507 - 1623677 - | transcriptional regulator TERM 2437 1624608 - 1624587 - R 80 -5.8 -5.06585 | opp_overlap 1624587 GAAAGCACATAAAAA GACGCCCT TCTTGC AGGCCGTC TTTTTCGATAGATTA TERM 2438 1624587 - 1624608 + r 76 -5.8 -4.68424 | opp_overlap 1624587 GAAAGCACATAAAAA GACGCCCT TCTTGC AGGCCGTC TTTTTCGATAGATTA nanA 1625620 - 1624703 - | N-acetylneuraminate lyase TERM 2439 1625224 - 1625241 + g 70 -7.7 -3.67878 | TAATAAAATCAGTAT TCGGTGC ACCT GCACTGA TTGTGTTCCAATAGT nanE 1626335 - 1625640 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 2440 1625737 - 1625747 + g 79 -6.8 -4.62783 | CAACCTAATTTTAGA GCAG TGA CTGC TTTTTCAGGTGAATC TERM 2441 1625933 - 1625947 + g 86 -11.4 -3.26545 | opp_overlap 1625932 1625930 1625933 TCACATCATCAAGAC TGGCCG TAT CGGCCA TTAATAATGTATCAG TERM 2442 1625947 - 1625933 - G 79 -11.4 -2.50988 | opp_overlap 1625933, overlap 1625932 1625930 TCACATCATCAAGAC TGGCCG TAT CGGCCA TTAATAATGTATCAG TERM 2443 1626531 - 1626483 - R 73 -9.9 -2.54655 | opp_overlap 1626484 1626489 1626497, overlap 1626489 1626497 AAAATTTCCAATTTA CTAAAATAATAAAACGACGTAGT TAC ATTACGCCGCTTCATTATTTTAT CCCTTATAAGTTTCA TERM 2444 1626525 - 1626489 - R 83 -8.9 -4.30978 | opp_overlap 1626484 1626489 1626497, overlap 1626483 1626497 TCCAATTTACTAAAA TAATAAAACGACGTAGT TAC ATTACGCCGCTTCATTA TTTTATCCCTTATAA TERM 2445 1626517 - 1626497 - R 83 -6.1 -5.10656 | opp_overlap 1626489 1626484 1626497, overlap 1626489 1626483 ACTAAAATAATAAAA CGACGTAGT TAC ATTACGCCG CTTCATTATTTTATC LSA1642 1628030 - 1626528 - | putative solute:Na(+) symporter LSA1643 1628215 - 1629087 + | ROK family sugar kinase TERM 2446 1629149 - 1629197 + F 100 -10.6 -5.626 | gap 1, opp_overlap 1629160, overlap 1629131 TCTTAATATTTAACC GCTAAATTTA-AGACGATTCCCT ACAT AGGGAGTAGTCTGTCAATTTAGC TTTTTTTATGGGGTG LSA1644 1629218 - 1629949 + | hypothetical protein LSA1645 1629951 - 1631117 + | putative Na(+)/(+) antiporter TERM 2447 1631123 - 1631150 + T 100 -15.8 -5.38326 | opp_overlap 1631123 TACTAATTAAAAAAA GCATCGACAATT TTAA AATTGTCGATGC TTTTTATTTGATTAA TERM 2448 1631150 - 1631123 - T 100 -15.8 -5.65513 | opp_overlap 1631123 TACTAATTAAAAAAA GCATCGACAATT TTAA AATTGTCGATGC TTTTTATTTGATTAA prs 1632133 - 1631162 - | ribose-phosphate diphosphokinase (phosphoribosyl pyrophosphate synthetase) LSA1647 1632407 - 1632745 + | hypothetical protein TERM 2449 1632796 - 1632763 - T 100 -14.1 -5.90231 | opp_overlap 1632763 ACAAACATAAAAAAA TCGTCCGTAATCTCA GAAA TAAGATTACGAACGA TTTTTATTTCAAGAC TERM 2450 1632763 - 1632796 + T 100 -9.7 -5.27335 | opp_overlap 1632763 ACAAACATAAAAAAA TCGTCCGTAATCTCA GAAA TAAGATTACGAACGA TTTTTATTTCAAGAC glmU 1634323 - 1632935 - | UDP-N-acetylglucosamine pyrophosphorylase / N-acetylglucosamine-1-phosphate uridyltransferase TERM 2451 1634021 - 1634009 - G 70 -7.7 -3.62597 | GCCAGCTGTTAATAA TGGTG TAT CACCA CTGACCACAATTGTA TERM 2452 1634648 - 1634635 - g 70 -3.8 -4.7889 | ACAAACATCTAAAAA GCCA CTCGAT TGGC ACGCCCCTTCTGAAA TERM 2453 1634988 - 1634972 - g 73 -5.1 -4.67904 | opp_overlap 1634972 GATGAAGCGCAAAAA TTGGGTG AAA CATCCAA TTCTCACGGCTGTAT LSA1649 1634456 - 1635076 + | extracellular protein precursor TERM 2454 1635062 - 1635084 + F 84 -3.5 -5.60993 | gap 1, overlap 1635081 CCAGTCAATACCAAA GTCG-TCATT CACT AATGGGCGAC TTTTTTTGTAGAAAG LSA1650 1635110 - 1635700 + | hypothetical protein TERM 2455 1635716 - 1635683 - T 100 -11.9 -5.71712 | gap 1, opp_overlap 1635683 CTCGATACAAAAAAA GAGTATGAAGTCGGCT AAT AGCCGT-TTCATACTC TTTTTAGTTTAAGAA TERM 2456 1635683 - 1635716 + T 100 -14.1 -4.98531 | gap 1, opp_overlap 1635683 CTCGATACAAAAAAA GAGTATGAAGTCGGCT AAT AGCCG-TTTCATACTC TTTTTAGTTTAAGAA LSA1651 1636561 - 1635725 - | purine operon repressor TERM 2457 1636756 - 1636729 - R 79 -3.5 -5.56568 | gap 2, opp_overlap 1636752 ATAGTATTAAAAAAA TCGCCCACCACTA GCTA TAG-GG-GGACGA ATTGTCTTTAATGAT ispE 1637631 - 1636774 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 2458 1637875 - 1637854 - R 95 -7.3 -5.36441 | CCTTCACATAAAAAA GGTCAAGCC TCTC AACTTGACC CACTCTTTTAATTTT LSA1653 1638323 - 1637883 - | MarR family transcriptional regulator TERM 2459 1638510 - 1638479 - R 100 -8.8 -5.64873 | opp_overlap 1638476 GTCAACAACAAAAAA GGGACTCAGACA ATCATCCA TGTCTCAGTCCC TGCTCGTATTCTTAT LSA1654 1638785 - 1638534 - | hypothetical protein ksgA 1639762 - 1638869 - | dimethyladenosine transferase LSA1656 1640333 - 1639764 - | hypothetical protein LSA1657 1641106 - 1640330 - | TatD family deoxyribonuclease TERM 2460 1641333 - 1641315 - R 72 -8.2 -3.55444 | opp_overlap 1641318, overlap 1641318 GCGTCACTCGTCAAA CAACTGCT TAC AGCAGTTA TTCGCCGAGCTATGC TERM 2461 1641330 - 1641318 - R 74 -7.7 -3.91716 | opp_overlap 1641318, overlap 1641315 TCACTCGTCAAACAA CTGCT TAC AGCAG TTATTCGCCGAGCTA TERM 2462 1641378 - 1641366 - R 74 -7.7 -3.84719 | opp_overlap 1641365 ATGCTCAAAGTCAAA GCGTT TCA AACGC ACTCTTTTCCATAAC TERM 2463 1641397 - 1641435 + r 78 -7.7 -4.26792 | gap 2, opp_overlap 1641397 CTTTTCCATAACAAA GGGCTAAAAGAC--CTACA GAA TGTAAATGTCTTTTAGCCC TTTTGACGTTTCTGT TERM 2464 1641435 - 1641397 - R 86 -9.9 -4.30719 | gap 2, opp_overlap 1641397 CTTTTCCATAACAAA GGGCTAAAAGAC--CTACA GAA TGTAAATGTCTTTTAGCCC TTTTGACGTTTCTGT metS 1643505 - 1641460 - | methionyl-tRNA synthetase TERM 2465 1641560 - 1641576 + g 100 -10.9 -4.30014 | CCTTGGCTTAATTCG CCACGTA ATT TACGTGG TTTTAAGTTAGTAAC TERM 2466 1643189 - 1643167 - G 72 -9.2 -3.14211 | opp_overlap 1643167 1643166 ACCTTGTTCCACTAA CCGATCAAAA ATC TTTTGAACGG CTTTCACGTGGTAAT TERM 2467 1643167 - 1643189 + g 70 -9.2 -2.77222 | opp_overlap 1643167, overlap 1643166 ACCTTGTTCCACTAA CCGATCAAAA ATC TTTTGAACGG CTTTCACGTGGTAAT TERM 2468 1643552 - 1643531 - R 100 -10.3 -5.63103 | opp_overlap 1643530 1643529 CCTTAATTAAAAAAA CGAGAATAA AAAG TTATTCTCG ACCTTTTTTAATAAT LSA1659 1644480 - 1643635 - | hypothetical protein TERM 2469 1643796 - 1643814 + g 74 -9.6 -3.30453 | overlap 1643786 TTAAGCGCTGAACCG TTGCGGCA AAC TGCTGCAA TTCATCTGCGTTATA LSA1660 1644812 - 1644492 - | hypothetical protein LSA1661 1645310 - 1644816 - | nucleotide NUDIX family hydrolase TERM 2470 1645396 - 1645372 - R 83 -5.8 -5.1675 | gap 1, opp_overlap 1645372 TTACCCACTAAAAAA TGACG-TCAGG TTCC CCTAAACGTCA TTTTGGCATTAGGCT LSA1662 1645692 - 1645405 - | hypothetical protein LSA1663 1646670 - 1645708 - | hypothetical protein LSA1664 1646805 - 1647344 + | putative dihydrofolate reductase TERM 2471 1647416 - 1647398 - f 86 -10.4 -3.74693 | opp_overlap 1647398 1647401, overlap 1647401 GCTTAGTCTATCAAA TAAGTGAC CCT GTCACTTA TTTGATAGACGGTGC TERM 2472 1647398 - 1647416 + F 86 -10.4 -3.73224 | opp_overlap 1647398 1647401, overlap 1647401 GCTTAGTCTATCAAA TAAGTGAC CCT GTCACTTA TTTGATAGACGGTGC TERM 2473 1647401 - 1647413 + F 74 -7.7 -4.00042 | opp_overlap 1647398 1647401, overlap 1647398 TAGTCTATCAAATAA GTGAC CCT GTCAC TTATTTGATAGACGG TERM 2474 1647413 - 1647401 - f 76 -7.7 -4.00756 | opp_overlap 1647401 1647398, overlap 1647398 TAGTCTATCAAATAA GTGAC CCT GTCAC TTATTTGATAGACGG TERM 2475 1647503 - 1647527 + F 100 -15.1 -5.63517 | AACTTAACCGCCATA CGTCCAAGACA ATT TGTCTTGGGCG TTTTTTATTTGGCCA TERM 2476 1647710 - 1647730 + G 71 -4 -4.8622 | GGAGGCTTTTTCACA TGACGGAT ATTCA ATGCGTCA TTTTTGATTGGGCAG phnX 1647709 - 1648506 + | phosphonoacetaldehyde hydrolase TERM 2477 1648855 - 1648834 - T 100 -10.9 -5.66684 | opp_overlap 1648834 1648837 TAAGCTATAAAAAAA GAACCCCAC AAAT GTGGAGTTC TCTTAGAAATAAAGG TERM 2478 1648834 - 1648855 + T 70 -8.7 -3.04144 | opp_overlap 1648834, overlap 1648837 TAAGCTATAAAAAAA GAACCCCAC AAAT GTGGAGTTC TCTTAGAAATAAAGG rplL 1649242 - 1648874 - | 50S ribosomal protein L7/L12 rplJ 1649809 - 1649306 - | 50S ribosomal protein L10 TERM 2479 1649894 - 1649871 - H 100 -8.2 -5.86976 | overlap 1649838 TTATAAAATAAAAAA CTCCATGTCC ACCA AGACATAGAG AGGGATTTCAACGTA TERM 2480 1650550 - 1650538 - g 72 -7.7 -3.75665 | GCACATCCTACCAAA TTCGG TGC CCGAA GTCGCTGTCTTCGAT ack3 1650125 - 1651309 + | acetate kinase (acetokinase) TERM 2481 1651352 - 1651320 - f 95 -15.2 -2.58812 | opp_overlap 1651320, overlap 1651323 TTTAAATTTAATCGA TAAGCATTTAAGGT TTTAC ACCTTAAATGCTTA TTTTTGTGCCTAAAT TERM 2482 1651320 - 1651352 + F 100 -15.2 -4.88067 | opp_overlap 1651320 1651323 TTTAAATTTAATCGA TAAGCATTTAAGGT TTTAC ACCTTAAATGCTTA TTTTTGTGCCTAAAT TERM 2483 1651349 - 1651323 - f 93 -12.5 -3.43965 | opp_overlap 1651320, overlap 1651320 AAATTTAATCGATAA GCATTTAAGGT TTTAC ACCTTAAATGC TTATTTTTGTGCCTA TERM 2484 1651397 - 1651407 + F 70 -2.6 -5.1286 | TTAATAAACGAACTT TAAT CGT ATTA TTTTTATGATTTTTC TERM 2485 1651703 - 1651686 - g 77 -8.3 -4.03234 | GCTGGTTTAGATAAA GGCGCCG TCTT CGTCGCC ACAGCACTTACCGGT LSA1669 1651503 - 1652861 + | putative adenine transport protein TERM 2486 1653406 - 1653430 + G 70 -7.7 -3.70331 | overlap 1653405 AATTCATGAACTATC CCGGCGTCGTC AAT GCCGACGATGG TGTTTTAGATGAATT TERM 2487 1653661 - 1653651 - g 71 -6.8 -4.13014 | CCGACACTTTTAAAA GGTG TTA CACC TCAAAATGCACGCTT adeC2 1652877 - 1654619 + | adenine deaminase TERM 2488 1654660 - 1654637 - T 100 -11 -5.63504 | opp_overlap 1654637 AACGGCATAAAAAAA GCGTTCATCC GAAA GGATGAGCGC TTTTTGCATTACCAA TERM 2489 1654637 - 1654660 + T 100 -13.2 -4.74103 | opp_overlap 1654637 AACGGCATAAAAAAA GCGTTCATCC GAAA GGATGAGCGC TTTTTGCATTACCAA rplA 1655366 - 1654677 - | 50S ribosomal protein L1 rplK 1655890 - 1655465 - | 50S ribosomal protein L11 TERM 2490 1655616 - 1655629 + g 76 -6.7 -4.56597 | ACCTTCTTAGTGTTT GGTTC GCCA GAACC TTTTTGAACACCGGC TERM 2491 1655638 - 1655673 + g 83 -12 -2.59797 | gap 1, opp_overlap 1655640, overlap 1655637 1655635 1655635 1655640 CAGAACCTTTTTGAA CACCGGCAGC-TTTCTT TAA AAGAACTGCTGCTGGTG GTGTCTTTGTAACGA LSA1673 1656873 - 1656016 - | putative lipase/esterase precursor TERM 2492 1656200 - 1656168 - G 72 -9.2 -3.18429 | gap 1, overlap 1656169 CAAAACTGCTATCAA CGGCCACTGAGCCGT CGTG ACGGCT-AGTGCCCA ACAATTCGCCAGCGA TERM 2493 1656199 - 1656169 - G 73 -10.5 -2.50575 | gap 1, overlap 1656168 AAAACTGCTATCAAC GGCCACTGAGCCGT CGTG ACGGCT-AGTGCCC AACAATTCGCCAGCG TERM 2494 1656258 - 1656281 + g 82 -4.6 -5.41143 | overlap 1656259 AATGCGCCACTCGTT TGGCTAAATA ATTA TAATTAGCCG TTTTTTTACGCGGTC TERM 2495 1656466 - 1656480 + g 87 -5 -5.44119 | CACCAGATTAATCGT GGTTAC GTC GTAATC TTTTTTTAAGATAGC TERM 2496 1656907 - 1656919 + r 74 -7.7 -3.84719 | TCTAAAATAAGAGGT GCGTT TGA AACGC TTTGACTTTGAGCAT TERM 2497 1656952 - 1656970 + r 72 -8.2 -3.55444 | opp_overlap 1656955, overlap 1656955 GCACAGCTCGGCGAA TAACTGCT GCA AGCAGTTG TTTGACGAGTGACGC TERM 2498 1656955 - 1656967 + r 74 -7.7 -3.91716 | opp_overlap 1656955, overlap 1656952 CAGCTCGGCGAATAA CTGCT GCA AGCAG TTGTTTGACGAGTGA TERM 2499 1657047 - 1657081 + r 81 -11.5 -2.68886 | opp_overlap 1657047, overlap 1657044 1657043 TTGACTATCAAATAA GGGACCGAAACAAAA ATTAC TTTTGTCACGGTCCC TAGGTTATTGCTTAA TERM 2500 1657081 - 1657047 - R 100 -14.4 -4.0274 | opp_overlap 1657047 1657044 1657043 TTGACTATCAAATAA GGGACCGAAACAAAAA TTA CTTTTGTCACGGTCCC TAGGTTATTGCTTAA nusG 1657764 - 1657216 - | transcription antitermination protein NusG TERM 2501 1657813 - 1657798 - R 90 -2.5 -6.11229 | ACCAAAATAAAAAAA CTCCG ACCACG CGAAG TTTTCTGCTTGCCAC TERM 2502 1657859 - 1657842 - R 73 -6.3 -4.39889 | opp_overlap 1657842 1657845 ACAAGTATAGCAAAA CCAGCTT CATT AAGCTAG TTTTAAAAAATAAAT secE 1658041 - 1657862 - | preprotein translocase subunit SecE rpmG2 1658200 - 1658051 - | 50S ribosomal protein L33 TERM 2503 1658324 - 1658284 - R 79 -10.5 -3.23711 | overlap 1658289 CTTAGAATCCATCAA CAAAAGCGGTGAACCCG TTTAGTC CAGTCCCACCGCTTTTG GTTAACGATTCTCTT TERM 2504 1658319 - 1658289 - R 71 -4.6 -4.731 | overlap 1658284 AATCCATCAACAAAA GCGGTGAACCCG TTTAGTC CAGTCCCACCGC TTTTGGTTAACGATT LSA1677 1658886 - 1658326 - | DNA-directed RNA polymerase sigma factor LSA1678 1659497 - 1658964 - | hypothetical protein LSA1679 1660388 - 1659501 - | putative tRNA/rRNA methyltransferase TERM 2505 1659729 - 1659749 + g 80 -2.6 -5.46129 | gap 1, opp_overlap 1659729 1659730, overlap 1659729 1659730 ATCTGTACCAAAAAT C-CAGAGAC CGCG GTCTTTGAG TTTTTTGATTTCTTG LSA1680 1660794 - 1660375 - | hypothetical protein cysS 1662185 - 1660779 - | cysteinyl-tRNA synthetase TERM 2506 1662264 - 1662250 - R 87 -11.4 -3.61178 | opp_overlap 1662240 1662253, overlap 1662251 1662253 GCTACGTATTGCAAA CGACCG ACT CGGTCG GTCATTCACAACACT TERM 2507 1662267 - 1662251 - R 84 -12.3 -2.76492 | opp_overlap 1662240 1662253, overlap 1662250 1662253 CTACGTATTGCAAAC GACCGAC TCG GTCGGTC ATTCACAACACTGTG TERM 2508 1662367 - 1662400 + r 91 -6.2 -5.52023 | opp_overlap 1662367 CCGCTTAATCTAAAA TTACAAATAATCCT AAAACC GGGATTATTCGTAA TTTTTTATTAATGCT TERM 2509 1662400 - 1662367 - R 78 -7.7 -4.27316 | opp_overlap 1662367 CCGCTTAATCTAAAA TTACAAATAATCC TAAAACCG GGATTATTCGTAA TTTTTTATTAATGCT TERM 2510 1662526 - 1662490 - R 88 -10.3 -3.90112 | opp_overlap 1662499 CTGCGCTTAACCAAA TTTACCAAATCGGCGAT TAC ATCGCCAATTCGTCAAA TCCAGTTAATGCTCA TERM 2511 1662733 - 1662706 - R 100 -11.4 -5.27335 | overlap 1662685 1662731 TCTTCCAAATAAAAA GCGCCCTTTGTT AATT AACAAAAGACGC CGGTTGAGCGTGGTT LSA1682 1664088 - 1662976 - | hypothetical protein TERM 2512 1663762 - 1663752 - G 71 -2.4 -5.18726 | TGTTCAGAACAAAAA TCGG CAT CCGG TATAACGGAATCGAA LSA1683 1665483 - 1664119 - | DNA repair protein RadA TERM 2513 1664699 - 1664725 + g 82 -8.1 -4.56775 | opp_overlap 1664698 1664722 1664723, overlap 1664691 CGCATTTCGAAAATC CCGATTTCGTT GGTTG AACCAAATCGG TTTTTAACAGACCGT dut 1666095 - 1665556 - | deoxyuridine 5'-triphosphatase TERM 2514 1666234 - 1666219 - H 70 -2.5 -5.16237 | AATTTTAGCAAAAAA CGCCT ATTTTA AAGCG CTTTTTTACCAGTTA rpiA 1666291 - 1666974 + | ribose-5-phosphate isomerase A TERM 2515 1667266 - 1667292 + F 100 -11.1 -5.88197 | opp_overlap 1667269 ATGCCAATCCCCCAA TAACCATCATA CTCGT TATGATGGTTA TTTTTTTATCTTTAA TERM 2516 1667289 - 1667269 - f 72 -8.4 -3.63569 | opp_overlap 1667266 CCAATCCCCCAATAA CCATCATA CTCGT TATGATGG TTATTTTTTTATCTT TERM 2517 1667959 - 1667943 - g 70 -7.3 -3.76232 | GCCTGAAACATACAA CAGTGAT TTA ACCACTG AATTCAACAGTACTC pepC1N 1667449 - 1668657 + | cysteine aminopeptidase C1 (Bleomycin hydrolase) (N-terminal fragment), authentic frameshift pepC1C 1668679 - 1668771 + | cysteine aminopeptidase C1 (Bleomycin hydrolase) (C-terminal fragment), authentic frameshift TERM 2518 1669328 - 1669316 - g 72 -6.3 -4.26076 | overlap 1669325 CTACTTCTACGAAAA TGTCT TAA AGACA GCCGATCAACCAATC pepC2 1668975 - 1670321 + | cysteine aminopeptidase C2 (Bleomycin hydrolase) TERM 2519 1670367 - 1670323 - T 100 -18.9 -3.58037 | opp_overlap 1670323 1670334, overlap 1670334 TAGCAAGTCGCTAAA CAAATTAAAAAGGTCAGGACA AAT TGTCCTGGCCTTTTTGATTTG TTCTAATCCTGTGTC TERM 2520 1670323 - 1670367 + T 100 -23.3 -3.46563 | opp_overlap 1670323 1670334, overlap 1670334 TAGCAAGTCGCTAAA CAAATTAAAAAGGTCAGGACA AAT TGTCCTGGCCTTTTTGATTTG TTCTAATCCTGTGTC TERM 2521 1670356 - 1670334 - T 100 -12 -5.13137 | opp_overlap 1670323 1670334, overlap 1670323 TAAACAAATTAAAAA GGTCAGGACA AAT TGTCCTGGCC TTTTTGATTTGTTCT TERM 2522 1670334 - 1670356 + T 100 -14.2 -5.10877 | opp_overlap 1670334 1670323, overlap 1670323 TAAACAAATTAAAAA GGTCAGGACA AAT TGTCCTGGCC TTTTTGATTTGTTCT LSA1689 1671692 - 1670370 - | M20 family peptidase LSA1690 1673030 - 1671714 - | putative cellobiose-specific phosphotransferasesystem, enzyme IIC TERM 2523 1672278 - 1672268 - G 75 -5.4 -4.78753 | TCAATACGAAGAAAA TTGG TGA CCAA ACACTATTTGTAATA TERM 2524 1672296 - 1672280 - G 70 -8.1 -3.73968 | AAATTGGTGACCAAA CACTATT TGT AATAGTG GGGCCGTTAATACCA LSA1691 1673573 - 1673046 - | hypothetical protein TERM 2525 1673503 - 1673513 + g 75 -2.4 -5.27335 | opp_overlap 1673503, overlap 1673495 TTCTTACCACCTAAA GGTG TAT CTCC TTTTTCTTTACCACC LSA1692 1674302 - 1673586 - | GntR family transcriptional regulator TERM 2526 1673996 - 1673984 - G 70 -7.7 -3.58905 | AGTCTGGATAGACAA TTGCG CGG CGCAA ATCTAACACCCGAGT asnA2 1675272 - 1674319 - | L-asparaginase TERM 2527 1674587 - 1674570 - G 100 -11.3 -4.05926 | overlap 1674584 1674585 CAACAAATGGATAAA CGGCTTG ATCA CAAGCCG CTTGCGGCGATAATC TERM 2528 1675361 - 1675396 + r 76 -6.3 -4.68593 | opp_overlap 1675362, overlap 1675362 TTTCCAAAATAAAAA AGCGTTG-CGACAAAAG ATTA CTTTTG-CGACAACGCC TTTTTCAATCATCAA TERM 2529 1675395 - 1675362 - R 100 -11.1 -5.79595 | opp_overlap 1675361 1675362 TTCCAAAATAAAAAA GCGTTGCGACAAAAG ATTA CTTTTGCGACAACGC CTTTTTCAATCATCA TERM 2530 1675362 - 1675395 + r 78 -9.8 -3.40674 | opp_overlap 1675362, overlap 1675361 TTCCAAAATAAAAAA GCGTTG-CGACAAAAG ATTA CTTTTG-CGACAACGC CTTTTTCAATCATCA LSA1694 1676348 - 1675443 - | putative glycine/betaine/carnitine ABC transporter, substrate binding lipoprotein precursor LSA1695 1677202 - 1676360 - | putative glycine/betaine/carnitine ABC transporter, membrane-spanning subunit LSA1696 1678406 - 1677207 - | putative glycine/betaine/carnitine ABC transporter, ATP-binding subunit TERM 2531 1678723 - 1678702 - R 91 -5.8 -5.63103 | opp_overlap 1678702 TGGCAATCAAAAAAA CAGGCCCC TTTGGG AGGACCTG TTTTGGCTAACCTGT LSA1697 1680222 - 1678738 - | putative amino-acid/polyamine transport protein TERM 2532 1680386 - 1680419 + r 75 -5.4 -4.72386 | opp_overlap 1680388, overlap 1680388 ATTTAAAAACAAAAA AAGATTGGGACAAA AATGAA TTTATCCCAATCTC TTTTTCAATACTTTC TERM 2533 1680417 - 1680388 - R 100 -10.2 -6.20267 | opp_overlap 1680386 1680388 TTAAAAACAAAAAAA GATTGGGACAAA AATGAA TTTATCCCAATC TCTTTTTCAATACTT TERM 2534 1680388 - 1680417 + r 74 -8 -3.96486 | opp_overlap 1680388, overlap 1680386 TTAAAAACAAAAAAA GATTGGGACAAA AATGAA TTTATCCCAATC TCTTTTTCAATACTT LSA1698 1681138 - 1680437 - | integral membrane protein TERM 2535 1681242 - 1681206 - R 78 -3.9 -5.31059 | gap 2, opp_overlap 1681206 ACAGCAATCAAAAAA GCGATTAGC-TG-CC TCTGATATC GGCCAAGCTAATCGC TTATTTCATTAGGCT mntH2 1682627 - 1681251 - | Mn(2+)/Fe(2+) transport protein TERM 2536 1682798 - 1682786 - R 91 -5.5 -5.81032 | opp_overlap 1682786 CAAGTTTAAAAAAAA CGCCA ATT TAGCG GTCTTTTTTTATGAA TERM 2537 1682875 - 1682846 - R 100 -13.7 -4.87626 | opp_overlap 1682846 CTTTAACACGAAAAA TGCCCAGATGTCT AAGA ACACATCTGGGCA TTACTAATAGGAGGA TERM 2538 1682846 - 1682875 + r 100 -13.7 -3.21099 | opp_overlap 1682846 CTTTAACACGAAAAA TGCCCAGATGTCT AAGA ACACATCTGGGCA TTACTAATAGGAGGA LSA1700 1683128 - 1682910 - | hypothetical protein pdcA 1683779 - 1683243 - | p-coumaric acid decarboxylase TERM 2539 1683800 - 1683817 + r 90 -7.1 -5.14163 | TTACCTCCGCGTTAT CATGTAA TTAA TTACATG TTTTTATTACTACGT TERM 2540 1683867 - 1683907 + r 78 -3.9 -5.29885 | opp_overlap 1683871, overlap 1683868 1683870 1683871 AAATTTGTCAACAAA AAAAGCATTGGGCTAAAAG TTG CCTTTAGCCCAACGCCTCA TTTTATTTTTAAGTT TERM 2541 1683870 - 1683904 + r 78 -10 -3.43674 | opp_overlap 1683871, overlap 1683868 1683867 1683871 TTTGTCAACAAAAAA AGCATTGGGCTAAAAG TTG CCTTTAGCCCAACGCC TCATTTTATTTTTAA TERM 2542 1683903 - 1683871 - R 100 -17.9 -5.7946 | opp_overlap 1683870 1683868 1683867 1683871 TTGTCAACAAAAAAA GCATTGGGCTAAAAG TTG CCTTTAGCCCAACGC CTCATTTTATTTTTA TERM 2543 1683871 - 1683903 + r 88 -13.5 -2.64578 | opp_overlap 1683871, overlap 1683870 1683868 1683867 TTGTCAACAAAAAAA GCATTGGGCTAAAAG TTG CCTTTAGCCCAACGC CTCATTTTATTTTTA LSA1702 1684836 - 1683922 - | alcohol dehydrogenase TERM 2544 1684611 - 1684634 + g 71 -6.8 -4.183 | gap 1 CAACCGTATAGCCTG CATTTTG-CGC TTG GCGACAGAATG TTTCTTGACCATTCA LSA1703 1686094 - 1684934 - | putative Na(+)/H(+) antiporter TERM 2545 1685240 - 1685223 - G 86 -9.9 -3.97812 | overlap 1685219 ATAATGAAGACTAAA TGCCGAT TTAA ATCGGCA AACGTCATCGATAAC TERM 2546 1686168 - 1686118 - H 90 -7.2 -5.24129 | gap 1 TTCCTCCATAAAAAA GCGCACT-AAAATTCCCTTCT ACCACCCTAA AGAAGGAAATCTTGAATGCGC AATGCTTCAACCGAA TERM 2547 1686567 - 1686552 - g 71 -4 -4.87665 | GTCGAGGCACAAAAA CGTTTA GCCA CAAACG GCCCTAACAAACTAG LSA1704 1686447 - 1689107 + | putative calcium-transporting P-type ATPase TERM 2548 1689149 - 1689118 - T 95 -11.7 -4.63542 | opp_overlap 1689118 GATAAGCGCCAAAAA GGGACTGTGCAAA TTTACT TTTGTACAGTCCC TTTTTATACATGTTC TERM 2549 1689118 - 1689149 + T 100 -13.9 -4.91459 | opp_overlap 1689118 GATAAGCGCCAAAAA GGGACTGTGCAAA TTTACT TTTGTACAGTCCC TTTTTATACATGTTC LSA1705 1690165 - 1689164 - | hypothetical protein TERM 2550 1690273 - 1690234 - R 85 -12.4 -3.03124 | opp_overlap 1690234 1690232 1690241 1690243, overlap 1690243 TCCCATTTGGCAACA TCAAAAAAAGACTAGGAT AACG ACCCTAGTCTCATTTTGA TATTGATACCTGTCT TERM 2551 1690264 - 1690243 - R 100 -9.5 -5.63374 | opp_overlap 1690243 1690241 1690234 1690232, overlap 1690234 GCAACATCAAAAAAA GACTAGGAT AACG ACCCTAGTC TCATTTTGATATTGA TERM 2552 1690576 - 1690540 - R 100 -8.3 -5.7946 | gap 1, opp_overlap 1690540 1690538 1690543 TTTTCAACAAAAAAA GAACGTTCGCGATAAA ATGATA TTTATCAC-AACGTTC TCTTAATCATACTTA LSA1706 1691572 - 1690589 - | putative beta-lactamase (class A) precursor LSA1707 1692406 - 1691588 - | hypothetical protein LSA1708 1693091 - 1692480 - | hypothetical protein LSA1709 1694180 - 1693140 - | hypothetical protein TERM 2553 1693722 - 1693705 - G 77 -4.7 -5.00616 | overlap 1693706 1693709 TCCCGGCTTAAAAAA GGCACCG CCAC CGGCGCA ACATTTGGCCGGTAG TERM 2554 1693721 - 1693706 - G 73 -8.2 -3.60048 | overlap 1693705 1693709 CCCGGCTTAAAAAAG GCACCG CCAC CGGCGC AACATTTGGCCGGTA TERM 2555 1694330 - 1694300 - R 100 -9.8 -5.55769 | opp_overlap 1694300, overlap 1694302 CTTTACAATAAAAAA GGCTGAGACAAAAA TCG CTTTTGCCTCAGTC TTTTTACTTTTTAAA TERM 2556 1694300 - 1694330 + r 100 -9.1 -5.18355 | opp_overlap 1694300 1694302 CTTTACAATAAAAAA GGCTGAGACAAAA ATCGC TTTTGCCTCAGTC TTTTTACTTTTTAAA TERM 2557 1694328 - 1694302 - R 79 -11 -2.94342 | opp_overlap 1694300, overlap 1694300 TTACAATAAAAAAGG CTGAGACAAAAA TCG CTTTTGCCTCAG TCTTTTTACTTTTTA lacM 1695297 - 1694341 - | Beta-galactosidase, small subunit (Lactase, small subunit) TERM 2558 1694562 - 1694582 + g 80 -9.7 -3.63895 | CAAATGGTTGATCGA CCGCCTTGA ACT TCAAGCCGG TTTCGACTGGTTCGC lacL 1697158 - 1695281 - | Beta-galactosidase, large subunit (Lactase, large subunit) TERM 2559 1695313 - 1695325 + g 71 -4.7 -4.7254 | AATAGTATCTAACCT CCTGC ATT GCTGG TTTTTCATCGCGGGT TERM 2560 1697233 - 1697260 + r 100 -9.3 -4.80882 | gap 1, opp_overlap 1697233 CTGGGATGTCAAAAA GAACCCT-ACAC AATTA GTGTCAGGGTTC TTTTTACTATCAGAT TERM 2561 1697260 - 1697233 - R 91 -9.3 -4.62069 | gap 1, opp_overlap 1697233 CTGGGATGTCAAAAA GAACCCT-ACAC AATTA GTGTCAGGGTTC TTTTTACTATCAGAT TERM 2562 1697387 - 1697397 + r 81 -2.6 -5.67967 | AATCATTCTCTGATC TAAA ATA TTTA TTTTTTTATCCTCAT LSA1712 1698362 - 1697625 - | putative nitroreductase (oxidoreductase) LSA1713 1698551 - 1698444 - | hypothetical protein TERM 2563 1698681 - 1698658 - R 100 -9 -5.44721 | opp_overlap 1698657, overlap 1698660 ATTAGGGCAAAAAAA TAGTAATCGA CAAG TCGATTACCA GTGAATTTCTGTAAA TERM 2564 1698679 - 1698660 - R 91 -9.4 -4.36089 | opp_overlap 1698657, overlap 1698658 TAGGGCAAAAAAATA GTAATCGA CAAG TCGATTAC CAGTGAATTTCTGTA LSA1714 1698819 - 1698676 - | hypothetical protein LSA1715 1699563 - 1698883 - | hypothetical protein LSA1716 1700273 - 1699638 - | hypothetical protein TERM 2565 1700414 - 1700388 - R 91 -5.9 -5.65513 | overlap 1700379 GAGCAATTAAAAAAA CACCCCACAAC TGCCC GTTATGAAGTG TTTTCTTGAATAATA LSA1717 1700755 - 1700435 - | XRE family DNA-binding protein LSA1718 1701151 - 1701789 + | lipoprotein precursor TERM 2566 1701838 - 1701809 - T 100 -18.1 -5.52384 | opp_overlap 1701809 TGGTCATCAAAAAAA GACCGTTCAAGTT TAAA AACTTGAACGGTC TTTTTTATGGTGCTA TERM 2567 1701809 - 1701838 + T 100 -18.1 -5.32882 | opp_overlap 1701809 TGGTCATCAAAAAAA GACCGTTCAAGTT TAAA AACTTGAACGGTC TTTTTTATGGTGCTA LSA1719 1702429 - 1701851 - | hypothetical protein TERM 2568 1702350 - 1702366 + g 73 -7.3 -4.16033 | GATGAAGTTGATGAT GCTGTTT CCT GAACAGC TTCTTCTTGTTTAAC LSA1720_a 1704825 - 1702456 - | hypothetical protein TERM 2569 1704654 - 1704664 + g 81 -4 -5.26119 | GTTCTAAATCCATAT TACA ACG TGTA TTTTCTTTTTCCCGA LSA1720_b 1705043 - 1704825 - | hypothetical protein TERM 2570 1705128 - 1705154 + r 100 -16.7 -4.07568 | opp_overlap 1705128 TTTTATACAAAAAAA CACCCCACAAC CATAA GTTGTGGGGTG TTTTGCAAAACCGAA TERM 2571 1705154 - 1705128 - R 100 -17.4 -5.71712 | opp_overlap 1705128 TTTTATACAAAAAAA CACCCCACAACC ATA AGTTGTGGGGTG TTTTGCAAAACCGAA rpsI 1705578 - 1705186 - | 30S ribosomal protein S9 rplM 1706035 - 1705592 - | 50S ribosomal protein L13 truA 1706919 - 1706170 - | tRNA pseudouridine synthase A TERM 2572 1706210 - 1706227 + g 73 -9.8 -3.05268 | opp_overlap 1706201 TACAAACCGCTTGCT GGCGCG GTTGAG CGCGCC TGTTGCCGATCCTTC TERM 2573 1707055 - 1707026 - R 86 -6.5 -5.17353 | opp_overlap 1707026 ATAGGTAGCAAAAAA GACTGTGATAAAA GTCA TCTTACCCCAGTC CTTTTTTTAAATAAT LSA1724 1707417 - 1707070 - | MarR family transcriptional regulator TERM 2574 1707556 - 1707588 + r 100 -13.7 -5.61596 | ATCTTTACTTATGAG CTTTAGTCTAATCTG TTT CAGATTGGATTAAAG TTTTTTTATGCAACT LSA1725 1708571 - 1707594 - | cell surface protein precursor LSA1726 1708857 - 1708705 - | hypothetical protein LSA1727 1709086 - 1708838 - | hypothetical protein LSA1728 1709874 - 1709086 - | cell surface protein precursor LSA1729 1710892 - 1709909 - | cell surface protein precursor LSA1730 1712837 - 1710960 - | cell surface protein TERM 2575 1711320 - 1711343 + g 90 -7.5 -5.18726 | opp_overlap 1711319, overlap 1711321 TGCATCTTTCAAGAC TCGTTTACG ATCGTC CGTAAACGG TTTTTCTTGTGCAAC TERM 2576 1711321 - 1711342 + g 75 -8.8 -3.70512 | opp_overlap 1711319, overlap 1711320 GCATCTTTCAAGACT CGTTTACG ATCGTC CGTAAACG GTTTTTCTTGTGCAA TERM 2577 1712074 - 1712086 + g 76 -7.7 -4.09685 | GTTTCATTCGTCCCA TCAGC CTT GCTGA TTTTAACAACTAACG LSA1731 1718130 - 1712824 - | cell surface protein precursor TERM 2578 1713329 - 1713345 + g 78 -9.5 -3.60538 | opp_overlap 1713328 1713344, overlap 1713327 1713344 CCTTTAGTACCAGAT GCTTTTG GAC CAAAAGC TGTTTCTGCTGCTTT TERM 2579 1714114 - 1714130 + g 76 -8.1 -4.09685 | overlap 1714106 CTTCATCTTGTAGTT CACAATT AAT AATTGTG TTTTCGACAATGAAA TERM 2580 1718235 - 1718260 + r 78 -9.9 -3.36538 | opp_overlap 1718223 1718233 1718235 1718238, overlap 1718238 AAATGATTCGAAACA GAATCATAACT CTTG AGTTATGGTTC TTGATAGTTTCTATA TERM 2581 1718481 - 1718539 + r 79 -3.2 -5.58074 | gap 4, opp_overlap 1718491, overlap 1718491 TATTAAATATATAGT T-ATTAAA---AAATCGCTATAAACGTTTA ATA TAAACGTTTATAGCGATTTTTATTTGATAA TTTTTTTCATCATTC TERM 2582 1718491 - 1718525 + r 100 -20.4 -5.34309 | opp_overlap 1718491, overlap 1718481 ATAGTTATTAAAAAA TCGCTATAAACGTTTA ATA TAAACGTTTATAGCGA TTTTTATTTGATAAT TERM 2583 1718525 - 1718491 - R 100 -20.4 -5.17353 | opp_overlap 1718491 1718481 ATAGTTATTAAAAAA TCGCTATAAACGTTTA ATA TAAACGTTTATAGCGA TTTTTATTTGATAAT TERM 2584 1718744 - 1718719 - R 88 -4.7 -5.73978 | ATCATAAATAAAAAA TCTAGAGAATG AATA CTCCCTCTAGA TTTAGTCTTATCTAA LSA1732 1719052 - 1718762 - | hypothetical protein LSA1733 1719177 - 1719109 - | hypothetical protein LSA1734 1720033 - 1719194 - | extracellular protein precursor TERM 2585 1720040 - 1720053 + r 70 -3.1 -4.98672 | gap 1 TTTAATCATGCTTTT CGC-CT CCA AGTGCG TTTTATATTTTTAGC TERM 2586 1720378 - 1720424 + r 80 -6.8 -4.8143 | opp_overlap 1720378 GTCGATACTAAAAAA GCATTATCTGTAAAATCACC CTTTTGA GGTCATTTTATAGGCAATGC TTTTTGAATTGTTCA TERM 2587 1720424 - 1720378 - R 81 -5.3 -5.21709 | opp_overlap 1720378 GTCGATACTAAAAAA GCATTATCTGTAAAATCACCC TTTTG AGGTCATTTTATAGGCAATGC TTTTTGAATTGTTCA LSA1735 1721231 - 1720440 - | cobalt ABC transporter transmembrane protein LSA1736 1722099 - 1721224 - | cobalt transporter ATP-binding subunit LSA1737 1722917 - 1722075 - | cobalt transporter ATP-binding subunit TERM 2588 1723018 - 1722982 - R 100 -16.9 -3.484 | opp_overlap 1722985 1722991, overlap 1722991 1722995 CTGAGTATAGCATAA TCAGTCAAATTAACGAT GTA ATCGTTGATTTGACTGA TGTCGATAGACGGAA TERM 2589 1722985 - 1723015 + r 95 -15 -2.64616 | opp_overlap 1722982 1722991 1722995, overlap 1722991 AGTATAGCATAATCA GTCAAATTAACGAT GTA ATCGTTGATTTGAC TGATGTCGATAGACG TERM 2590 1723239 - 1723257 + r 72 -8.2 -3.5393 | opp_overlap 1723242, overlap 1723242 ACCTAGTTCCGTGAA TAAGCGAT GCA ATCGCTTG TTTGCGGGACGTAGT TERM 2591 1723242 - 1723254 + r 74 -7.7 -3.90922 | opp_overlap 1723242, overlap 1723239 TAGTTCCGTGAATAA GCGAT GCA ATCGC TTGTTTGCGGGACGT TERM 2592 1723464 - 1723418 - R 90 -12.7 -3.12446 | gap 1, opp_overlap 1723422 1723427, overlap 1723427 TATAAATCCACTTAA CACAA-AAAACGCCTAACTCTG TAAA CAGAATTAGACGTTTTATTATG TAAATCATCAATCGA TERM 2593 1723427 - 1723454 + r 83 -7 -4.84914 | opp_overlap 1723418 1723427, overlap 1723422 ACTTAACACAAAAAA CGCCTAACTCTG TAAA CAGAATTAGACG TTTTATTATGTAAAT TERM 2594 1723454 - 1723427 - R 100 -11.4 -5.48063 | opp_overlap 1723427 1723422, overlap 1723418 ACTTAACACAAAAAA CGCCTAACTCTG TAAA CAGAATTAGACG TTTTATTATGTAAAT rplQ 1723973 - 1723593 - | 50S ribosomal protein L17 rpoA 1724938 - 1724000 - | DNA-directed RNA polymerase subunit alpha TERM 2595 1724613 - 1724635 + g 73 -10.6 -2.53995 | opp_overlap 1724613 1724616 TCATCCGAAATGATA TCAGCAGCAG TAA CTGTTGCTGG TCCCTTAACGTCAAT rpsK 1725414 - 1725022 - | 30S ribosomal protein S11 rpsM 1725803 - 1725438 - | 30S ribosomal protein S13 rpmJ 1725942 - 1725826 - | 50S ribosomal protein L36 infA 1726193 - 1725975 - | translation initiation factor IF-1 TERM 2596 1726141 - 1726163 + g 74 -9.3 -3.29324 | overlap 1726140 TTGAACATTGCATTT GGTAAAGTA TCAGT TACTTTACC TTCAATTTCAATGAC TERM 2597 1726261 - 1726237 - R 78 -5.6 -5.04597 | opp_overlap 1726237, overlap 1726238 ATTCATACAGAAAAA TGGTGAGAGC TCTCC GCACTCACCC TAGTGTCATACCGAG TERM 2598 1726260 - 1726238 - R 75 -9.1 -3.61674 | opp_overlap 1726237, overlap 1726237 TTCATACAGAAAAAT GGTGAGAGC TCTCC GCACTCACC CTAGTGTCATACCGA adk 1727041 - 1726385 - | adenylate kinase TERM 2599 1726647 - 1726625 - G 70 -9.2 -2.75963 | opp_overlap 1726625, overlap 1726624 AGTTGGATGGTAAAG CTTATGGTAC GTT GCACCACAAG TTTTACAAATGAAGC secY 1728390 - 1727095 - | preprotein translocase subunit SecY rplO 1728825 - 1728391 - | 50S ribosomal protein L15 rpmD 1729045 - 1728860 - | 50S ribosomal protein L30 rpsE 1729560 - 1729060 - | 30S ribosomal protein S5 rplR 1729938 - 1729579 - | 50S ribosomal protein L18 rplF 1730512 - 1729979 - | 50S ribosomal protein L6 rpsH 1730941 - 1730543 - | 30S ribosomal protein S8 TERM 2600 1731131 - 1731146 + r 76 -4.8 -5.00616 | opp_overlap 1731140 TTGCAGGACGATGAT TCTTTA CAAC TAAAGA TTTTTTAGCCAAGAA rplE 1731718 - 1731176 - | 50S ribosomal protein L5 rplX 1732058 - 1731747 - | 50S ribosomal protein L24 rplN 1732457 - 1732089 - | 50S ribosomal protein L14 rpsQ 1732769 - 1732500 - | 30S ribosomal protein S17 rpmC 1732987 - 1732793 - | 50S ribosomal protein L29 rplP 1733411 - 1732977 - | 50S ribosomal protein L16 rpsC 1734073 - 1733414 - | 30S ribosomal protein S3 rplV 1734440 - 1734087 - | 50S ribosomal protein L22 rpsS 1734740 - 1734459 - | 30S ribosomal protein S19 TERM 2601 1734640 - 1734656 + g 79 -6.6 -4.70515 | GTCGAGCGACGGGAC CAAGTC TTGAT GACTTG TTTCTTTTCGCTGTC TERM 2602 1734767 - 1734799 + r 72 -7.8 -3.68619 | gap 1, opp_overlap 1734765 1734767 1734766, overlap 1734765 1734767 CTTCGAATGAAAAGT G-CAACGTGCCCTAA TTGC TTAGGCCGCGTTGGC TTTGGATAAGTTCAA rplB 1735658 - 1734825 - | 50S ribosomal protein L2 rplW 1735981 - 1735697 - | 50S ribosomal protein L23 rplD 1736604 - 1735981 - | 50S ribosomal protein L4 rplC 1737260 - 1736628 - | 50S ribosomal protein L3 TERM 2603 1737111 - 1737128 + g 70 -7.7 -3.73447 | overlap 1737109 1737104 TTCAAAACCGACTTG GATGGCT TCAT AGCCGTC TGTTTCGTTTGTTTT rpsJ 1737612 - 1737304 - | 30S ribosomal protein S10 TERM 2604 1738371 - 1738381 + G 71 -8.2 -3.43564 | opp_overlap 1738371, overlap 1738358 TGCGTGCTGCACACA GCCG TTT CGGC TTATAACTTGAATTA LSA1766 1737948 - 1738499 + | hydrolase isocharismatase/nicotinamidase family protein TERM 2605 1738552 - 1738524 - T 100 -21.9 -4.84918 | opp_overlap 1738524 TCTATAAATATAAAA GCCACCGCCAATT CAA AATTGGCGGTGGC TTTCTTTGTTTGTTA TERM 2606 1738524 - 1738552 + T 100 -21.9 -4.86861 | opp_overlap 1738524 TCTATAAATATAAAA GCCACCGCCAATT CAA AATTGGCGGTGGC TTTCTTTGTTTGTTA TERM 2607 1739007 - 1738982 - T 100 -11.2 -5.32944 | CTCACAACTAAAAAA CCGAGTTGCT TTTGAC AGCAACCCGG TCACAAAAAAACGAT fusA 1741157 - 1739070 - | elongation factor G TERM 2608 1741239 - 1741203 - R 84 -11.1 -3.60201 | overlap 1741201 1741198 CTAAAGACAACAAGA GGCCATTATATGATTTT TTA AAAAACATACAATAGCC AACCTTGATAATCTT rpsG 1741723 - 1741253 - | 30S ribosomal protein S7 TERM 2609 1741282 - 1741293 + g 75 -5.8 -4.67354 | overlap 1741279 GTGCAAATGCGCGGT TGGC ATCA GCCA TTTTATGTGTATCTT TERM 2610 1741493 - 1741479 - G 74 -9.2 -3.35798 | opp_overlap 1741478 ACTTGGTAGTTAGAA CCACCG ATA CGGCGG GCTTTAACTTCAAGT rpsL 1742226 - 1741813 - | 30S ribosomal protein S12 TERM 2611 1743134 - 1743102 - g 100 -11.4 -5.54894 | gap 1, opp_overlap 1743102 AAGGCATCAAAAAAA TCTGGC-CATCGCCT AAAC AAGCGACGCGCCAGA TTCCTTTTATTCCCT LSA1771 1742507 - 1743196 + | putative type IV leader peptidase ( type II secretion system) TERM 2612 1743234 - 1743218 - T 71 -5.1 -4.56597 | overlap 1743219 TTTCTTTTTCAAAAA CGATGCC GTA GACATCA CTTGCCCCATTCTCG LSA1772 1743484 - 1743200 - | isochorismatase/nicotamidase family hydrolase (C-terminal fragment), authentic frameshift LSA1773 1743773 - 1743414 - | hypothetical protein TERM 2613 1743806 - 1743823 + r 84 -7.7 -4.63184 | gap 1, opp_overlap 1743806 TTTGGTAGACAAAAA GAGG-CCC CGA GGGACCTC TTTTTAACGTGCATT TERM 2614 1743823 - 1743806 - R 100 -9.1 -4.96848 | opp_overlap 1743806 TTTGGTAGACAAAAA GAGGCCC CGAG GGACCTC TTTTTAACGTGCATT TERM 2615 1743866 - 1743904 + r 90 -13.2 -2.83715 | opp_overlap 1743879, overlap 1743870 1743879 CCTGTGCCTAGCGCT GTCCGTCGAATAAGCGAC TGT GTCGCTTATTCACCAGAC TATGCTAGTGCTCGG TERM 2616 1743891 - 1743879 - R 75 -9.1 -3.61398 | opp_overlap 1743870 1743866 1743879 CTGTCCGTCGAATAA GCGAC TGT GTCGC TTATTCACCAGACTA TERM 2617 1743879 - 1743891 + r 75 -9.1 -3.61715 | opp_overlap 1743879, overlap 1743870 1743866 CTGTCCGTCGAATAA GCGAC TGT GTCGC TTATTCACCAGACTA rpoC 1747591 - 1743947 - | DNA-directed RNA polymerase subunit beta' TERM 2618 1746718 - 1746736 + g 75 -3 -5.0925 | opp_overlap 1746718 CAATCAAAGCATCAA CGGCTTCT TGA AGCATCCG TTTTTCGTTTTGAAC TERM 2619 1747321 - 1747333 + g 76 -7.7 -4.13014 | CAATGTGACCCATGC GTTCG CGA CGAAC TTTTGAACGTGTAAC rpoB 1751255 - 1747662 - | DNA-directed RNA polymerase subunit beta LSA1776 1751846 - 1751514 - | putative 4-carboxymuconolactone decarboxylase LSA1777 1752029 - 1752913 + | phosphate ABC transporter substrate-binding protein TERM 2620 1752918 - 1752953 + F 100 -15 -3.25823 | opp_overlap 1752926, overlap 1752926 ACGTTAAATAACGCT TCTAAAAAGACGGCTA AAAT TAGCCGTCTTTTTATA TTGGTATAGACAAAA TERM 2621 1752926 - 1752945 + F 100 -12.2 -5.13344 | opp_overlap 1752926, overlap 1752918 TAACGCTTCTAAAAA GACGGCTA AAAT TAGCCGTC TTTTTATATTGGTAT TERM 2622 1752945 - 1752926 - f 100 -12.2 -4.58283 | opp_overlap 1752926 1752918 TAACGCTTCTAAAAA GACGGCTA AAAT TAGCCGTC TTTTTATATTGGTAT TERM 2623 1753952 - 1753942 - g 71 -4 -4.90455 | ACACATGCAGAAAAA CTAA AAA TTAG CCAGGTTCAACAAGC TERM 2624 1754685 - 1754665 - g 73 -3.9 -5.00884 | opp_overlap 1754676 1754679 ACGCCGGTTAAAAAA GGCCACGAC CCC ATTATGGCC AACCGCCAAATGATT fbp 1753051 - 1754976 + | fructose-1,6-bisphosphatase TERM 2625 1754990 - 1755020 + T 100 -9.7 -4.89233 | opp_overlap 1754991, overlap 1754991 AATAACACTAAAAAA ACGCCCCGACAAA ATCAA TTTGTCTGGGCGC TTTTTAATGTTGCTG TERM 2626 1755019 - 1754991 - T 100 -13.2 -5.6473 | opp_overlap 1754990 1754991 ATAACACTAAAAAAA CGCCCCGACAAA ATCAA TTTGTCTGGGCG CTTTTTAATGTTGCT TERM 2627 1754991 - 1755019 + T 100 -13.2 -3.52455 | opp_overlap 1754991, overlap 1754990 ATAACACTAAAAAAA CGCCCCGACAAA ATCAA TTTGTCTGGGCG CTTTTTAATGTTGCT clpC 1757514 - 1755046 - | ATPase/chaperone ClpC, putative specificity factor for ClpP protease TERM 2628 1755282 - 1755292 + g 73 -8.2 -3.62864 | TCTTGACACCTTGTT CCGC TAA GCGG TTTAAGATGCCTTTG ctsR 1758002 - 1757532 - | stress response transcriptional regulator CtsR TERM 2629 1758133 - 1758152 + r 78 -9.4 -3.57144 | opp_overlap 1758133 AACTGCACAAAAAAA GACTTGTT CGAC AACAAGTC TTTGAGAGTCGGGAA TERM 2630 1758152 - 1758133 - R 100 -9.4 -5.63504 | opp_overlap 1758133 AACTGCACAAAAAAA GACTTGTT CGAC AACAAGTC TTTGAGAGTCGGGAA TERM 2631 1758301 - 1758269 - R 81 -2.6 -5.61596 | gap 1, opp_overlap 1758299, overlap 1758277 1758278 ACGGGTACAAAAAAA GCGGAAGACG-GGAT TCGA ACCCGCGACCCCCAC CATGGCAAGGTGATG TERM 2632 1758505 - 1758519 + r 74 -4.2 -4.94972 | GACACTCTATCCAGT TGCGCT ATG GGTGCA TTTTTCATTATGATG TERM 2633 1760542 - 1760570 + r 71 -5.2 -4.57482 | overlap 1760539 1760545 GGATATTCTCCTCGA CCACCTGTGTCG GTTTA CGGTACGGGTAG TTTATTTCTCACTAG TERM 2634 1761917 - 1761936 + r 88 -10.8 -3.66803 | opp_overlap 1761916 1761915 1761925 TTCTGTCCTACAACC CCAAGAAG CAAG CTTCTTGG TTTGGGCTCTTCCCC TERM 2635 1762662 - 1762681 + r 72 -9.2 -2.65808 | opp_overlap 1762653 1762650, overlap 1762659 1762659 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 2636 1763995 - 1764015 + r 73 -6.2 -4.42619 | gap 1 AAACCATCTTTCAAC CCT-ACACC ATGC GGTGTTAGG TTTTATGCGGTATTA TERM 2637 1764736 - 1764696 - R 100 -23.7 -4.64766 | GGTATAGGTGAAAAA CGTGTTGGTCAACAAATCT CTC AAATTTGTTGACCAACACG CCATAATCACTACTA LSA1781 1765417 - 1764749 - | Flp/Fnr family transcriptional regulator LSA1782 1765984 - 1765436 - | putative ferritin-like DNA-binding protein (oxidative damage protectant) (Dps-type) LSA1783 1766217 - 1765996 - | putative heavy metal-chaperone/transport protein LSA1784 1768158 - 1766296 - | putative heavy metal-transporting P-type ATPase TERM 2638 1769109 - 1769099 - gH 78 -5.4 -5.01732 | AAGTGCTTGAAAAAA TTGG CGG CCAA GGGTTTGCCGAAATG LSA1785 1768468 - 1769259 + | hypothetical protein LSA1786 1769205 - 1770449 + | putative melibiose:Na(+) transport protein TERM 2639 1770488 - 1770459 - T 100 -20.9 -5.73672 | opp_overlap 1770459 AAATAACCAAAAAAA CCCCGATATTGGC TAAA GCCAATATCGGGG TTTTTTAGATACTTC TERM 2640 1770459 - 1770488 + T 100 -20.9 -5.12617 | opp_overlap 1770459 AAATAACCAAAAAAA CCCCGATATTGGC TAAA GCCAATATCGGGG TTTTTTAGATACTTC LSA1787 1772160 - 1770502 - | cell surface protein precursor TERM 2641 1772382 - 1772360 - R 100 -8.5 -5.75478 | opp_overlap 1772360 1772358, overlap 1772352 AACGATATAAAAAAA CGGGCTAAT AATTA ATTAACCCG TCTTATTACATGTGG LSA1788 1773179 - 1772421 - | putative phage-related 1,4-beta-N-acetyl muramidase (cell wall hydrolase) TERM 2642 1773412 - 1773390 - R 100 -9.8 -5.67283 | AAGCCAAACAAAAAA GACCTGCGTC AAA GACTCAGGCC CCACATTGTATATGT LSA1789 1774474 - 1773482 - | transcriptional regulator TERM 2643 1773710 - 1773692 - G 74 -10.2 -2.57647 | opp_overlap 1773707 1773709, overlap 1773691 1773687 ATTCATCACACCAAT CGCCATCG CAT CGTTGGCG GCTAGAATCGCCGTT TERM 2644 1774652 - 1774631 - R 91 -5.2 -5.79595 | opp_overlap 1774631, overlap 1774624 GGTCAAAATAAAAAA GCCAAGTT GAAGTG AACTTAGC TTTTCTTAACACTTA scrK 1775567 - 1774665 - | fructokinase dexB 1777200 - 1775554 - | glucan 1,6-alpha-glucosidase (dextran glucosidase) TERM 2645 1775639 - 1775651 + g 80 -3.5 -5.26875 | opp_overlap 1775639 TTATTTAATAATAAA TTATT GCT AATAA TTTTTTGATTAGGCC TERM 2646 1775819 - 1775832 + g 73 -5.3 -4.69053 | TGGCGAATAATTGCG TTACG TTTT CGTAA TTTTATTAACTGCTG scrA 1779152 - 1777212 - | sucrose-specific phosphotransferase system, enzyme IIBCA TERM 2647 1778015 - 1778042 + g 82 -7.8 -4.48713 | overlap 1778023 ACATCGCAGAAATCC CAGCAGAAGTCG TTAA TGACTTTTGTTG TTTATTCTTAGTAAC TERM 2648 1778023 - 1778034 + g 71 -2.2 -5.08731 | overlap 1778015 GAAATCCCAGCAGAA GTCG TTAA TGAC TTTTGTTGTTTATTC TERM 2649 1779311 - 1779328 + H 77 -8.5 -3.93009 | opp_overlap 1779311 1779309 1779307 1779304 TAAAAGAATGACATA CGTTTGA CATA TCAAACG TTTACATTTATATTA scrB 1779379 - 1780854 + | Sucrase-6-phosphate hydrolase (Sucrase, invertase) TERM 2650 1781056 - 1781077 + G 70 -2.9 -4.99056 | opp_overlap 1781050 1781059, overlap 1781050 1781059 TCGTTACAAGGAAAG AAAGCCCAA ATGA TAGGGCTTA TTTTTCCTTCTGTTA TERM 2651 1781074 - 1781059 - g 71 -4.6 -4.59982 | opp_overlap 1781056 1781050 1781059, overlap 1781050 TTACAAGGAAAGAAA GCCCAA ATGA TAGGGC TTATTTTTCCTTCTG scrR 1780882 - 1781862 + | LacI family sucrose operon repressor TERM 2652 1781865 - 1781903 + T 100 -14.8 -5.68438 | opp_overlap 1781868, overlap 1781867 1781868 TAATTCAATTTAAAA AAAGCAGTTGGGATAAAA TTA TTTTATCCCAACTGCCTC TTTTTTATTTACTAA TERM 2653 1781867 - 1781901 + T 100 -17.4 -4.47052 | opp_overlap 1781868, overlap 1781865 1781868 ATTCAATTTAAAAAA AGCAGTTGGGATAAAA TTA TTTTATCCCAACTGCC TCTTTTTTATTTACT TERM 2654 1781868 - 1781900 + T 100 -20.9 -3.25791 | opp_overlap 1781868, overlap 1781867 1781865 TTCAATTTAAAAAAA GCAGTTGGGATAAAA TTA TTTTATCCCAACTGC CTCTTTTTTATTTAC TERM 2655 1781900 - 1781868 - T 100 -20.9 -5.53288 | opp_overlap 1781868 1781867 1781865 TTCAATTTAAAAAAA GCAGTTGGGATAAAA TTA TTTTATCCCAACTGC CTCTTTTTTATTTAC melA 1784089 - 1781915 - | Alpha-galactosidase (Melibiase) TERM 2656 1784053 - 1784066 + g 82 -3.1 -5.52384 | TACGCCCATTATCTA GGTAA AATA TTGCC TTTTTTTCATCAAAA TERM 2657 1785011 - 1784971 - g 84 -2.9 -5.60993 | gap 1 TTTTCCATAAAAAAA CAATGTATTCTCCTCTAA AATTTG CTAAA-GAAAATACATTG CACGATAGTAGTGTT LSA1796 1784181 - 1785044 + | AraC family transcriptional regulator LSA1797 1785515 - 1785069 - | MerR family transcriptional regulator TERM 2658 1785529 - 1785546 + H 78 -11.3 -2.71061 | overlap 1785525 1785545 ATTATTTCTCCTTGA CCTGGAG CTAA CTCCAGG TAGTATGCCTTTTTA LSA1798 1785594 - 1786325 + | oxidoreductase TERM 2659 1786336 - 1786371 + F 100 -21.4 -5.71983 | opp_overlap 1786336 ACTAATTTTTCTAAA GCGTGCTATGCCAAAG TTAC TTTTGGCATAGCACGC TTTTTTTATACTTGC TERM 2660 1786371 - 1786336 - f 100 -20.7 -3.55801 | opp_overlap 1786336 ACTAATTTTTCTAAA GCGTGCTATGCCAAA GTTACT TTTGGCATAGCACGC TTTTTTTATACTTGC LSA1799 1786492 - 1787211 + | GntR family transcriptional regulator TERM 2661 1787254 - 1787226 - T 100 -16.2 -5.16133 | opp_overlap 1787226 ATTACAACACAAAAA GAAGCCCTTATC GCATT GATAAGGGCTTC TTTTTTATAGTGCTT TERM 2662 1787226 - 1787254 + T 100 -16.9 -5.33785 | opp_overlap 1787226 ATTACAACACAAAAA GAAGCCCTTATCG CAT TGATAAGGGCTTC TTTTTTATAGTGCTT LSA1800 1790439 - 1787269 - | putative autotransport protein TERM 2663 1790389 - 1790365 - G 75 -7.2 -4.29073 | opp_overlap 1790365 1790364 1790361 CAAGAACGGAATAAA CATGATTGCG ATTAA CGAAATCATG ATGATTTTATTCTTG TERM 2664 1790598 - 1790575 - R 100 -13.2 -5.64274 | opp_overlap 1790575 TTAGTCACAAAAAAA GCGTTCCAGG TTAT CCTAGAACGC TTTAGCACACTAATT TERM 2665 1790575 - 1790598 + r 84 -11 -3.54919 | opp_overlap 1790575 TTAGTCACAAAAAAA GCGTTCCAGG TTAT CCTAGAACGC TTTAGCACACTAATT LSA1801 1791370 - 1790636 - | putative drug ABC exporter, membrane-spanning subunit LSA1802 1792252 - 1791383 - | putative drug ABC exporter, ATP-binding subunit TERM 2666 1792363 - 1792336 - R 100 -12.9 -5.29385 | opp_overlap 1792336 AATTTAATTAAAAAA CGCCTAACAAT AAACCG ATTGTTAGGCG TTTTCCGTGTATATT TERM 2667 1792336 - 1792363 + r 95 -12.9 -4.27861 | opp_overlap 1792336 AATTTAATTAAAAAA CGCCTAACAAT AAACCG ATTGTTAGGCG TTTTCCGTGTATATT serS 1793768 - 1792494 - | seryl-tRNA synthetase TERM 2668 1793840 - 1793808 - R 100 -8.5 -5.57396 | ATAATCAACAAAAAA GCCTTCTCATCCC CTAAATT GGGACGAAAAGAC TTCACATTCGCGGTA LSA1804 1795644 - 1794061 - | hypothetical protein TERM 2669 1795225 - 1795235 + g 73 -8.2 -3.58564 | opp_overlap 1795224, overlap 1795227 AACACCCTTCAAATG CCGC AAT GCGG TTGCTTTACTGATAT TERM 2670 1796438 - 1796422 - g 70 -9.5 -2.80816 | CGGCGACGTATTAGA CTTCGTT GAA AACGAAG CTGATCGTAAAAAAG dgk 1795853 - 1796515 + | deoxyguanosine kinase TERM 2671 1796531 - 1796556 + T 100 -16.3 -5.08824 | opp_overlap 1796531 ATCTGATTTAAAAAA GGCCTGGATAA GTTA TTATCCAGGCC TTTTTTGCATACAAA TERM 2672 1796556 - 1796531 - T 100 -16.3 -5.09225 | opp_overlap 1796531 ATCTGATTTAAAAAA GGCCTGGATAA GTTA TTATCCAGGCC TTTTTTGCATACAAA LSA1806 1798175 - 1796583 - | hypothetical protein TERM 2673 1797891 - 1797880 - G 71 -3 -5.04175 | TTAACCATATAAAAA TGAT AGGC ATCA CTCGGTACCTTAAAG TERM 2674 1798474 - 1798441 - R 95 -5.4 -6.01187 | opp_overlap 1798441 1798444 AACGAAACAAAAAAA GAACTTAGCATCAT TATTAG ATTTTGCTAAGTTC TGATTAAAAATTTTC LSA1807 1799340 - 1798489 - | hypothetical protein LSA1808 1799636 - 1799415 - | hypothetical protein LSA1809 1801097 - 1799709 - | extracellular protein precursor TERM 2675 1800359 - 1800346 - G 70 -3.8 -4.82667 | GTACTAGACCAAAAA CCAG CATTTT CTGG GAGTAAGTTAGCATA LSA1810 1802160 - 1801153 - | cell surface protein precursor TERM 2676 1802221 - 1802250 + r 78 -10.9 -2.7169 | opp_overlap 1802228, overlap 1802228 GCGCTCTCCTTCACG AAAAAAAGTTGGG TTTC CCCAACTTTTTTC TGATCTAATCTTTAA TERM 2677 1802243 - 1802228 - R 100 -9 -5.52384 | opp_overlap 1802221 1802228 CCTTCACGAAAAAAA GTTGGG TTTC CCCAAC TTTTTTCTGATCTAA TERM 2678 1802228 - 1802243 + r 100 -9 -5.34555 | opp_overlap 1802228, overlap 1802221 CCTTCACGAAAAAAA GTTGGG TTTC CCCAAC TTTTTTCTGATCTAA LSA1811 1802998 - 1802276 - | cell surface protein precursor TERM 2679 1803520 - 1803510 - H 70 -2.6 -5.16237 | opp_overlap 1803502 AATTTTATTAAAAAA TTTT AGA AAAA ATTTTTCAACTTTTT TERM 2680 1804596 - 1804583 - g 78 -5.9 -4.86621 | opp_overlap 1804583 ATTCTCAATGAAAAA GCGGC ACAG GCCAC GTTCTTCCCCACCGG LSA1812 1803704 - 1805110 + | putative surface polysaccharide deacetylase TERM 2681 1805145 - 1805118 - T 100 -20 -6.21477 | opp_overlap 1805118 AAGATTAAAAAAAAA GAACCCCGAGAC GGCT GTCTCGGGGTTC TTTTTTTAATCAGTA TERM 2682 1805118 - 1805145 + T 100 -20 -5.53991 | opp_overlap 1805118 AAGATTAAAAAAAAA GAACCCCGAGAC GGCT GTCTCGGGGTTC TTTTTTTAATCAGTA LSA1813 1805834 - 1805151 - | hypothetical protein LSA1814 1806659 - 1805937 - | hypothetical protein LSA1815 1806703 - 1807200 + | cell surface protein precursor TERM 2683 1807221 - 1807244 + F 79 -5.2 -5.14563 | opp_overlap 1807220 1807221, overlap 1807223 GATAATTCATGAAAG GTCGGGACAA TTTT TTGTCACGCC TTTTTTAATACCCCC TERM 2684 1807297 - 1807287 - g 71 -2.4 -5.14563 | GGTTCTATGAAAAAA TCGC TCC GCGT TTTCCTCCCATTACT TERM 2685 1807518 - 1807496 - g 77 -10.6 -3.23251 | overlap 1807494 TCAACAATCAACATA CACCGTTACA CTC CGTAACGGCG TGACTAACGATAGCG LSA1816 1807278 - 1808291 + | cell surface protein precursor TERM 2686 1808341 - 1808283 - T 84 -5 -5.42198 | gap 3, opp_overlap 1808301, overlap 1808286 1808296 1808301 CGTCAAAAAACAAAA GAACAATAATAATGAAAAGGCGCCGAGAC AGTT GTCTCGGCGCCTTTT--TTATTATC-TAA CGATGTTTACTAAGG TERM 2687 1808339 - 1808286 - T 100 -13.6 -4.75934 | gap 2, opp_overlap 1808301, overlap 1808283 1808296 1808301 CAAAAAACAAAAGAA CAATAATAATGAAAAGGCGCCGAGAC AGTT GTCTCGGCGCCTTTT--TTATTATCT AACGATGTTTACTAA TERM 2688 1808331 - 1808296 - T 100 -20.6 -3.07765 | opp_overlap 1808301, overlap 1808286 1808283 1808301 AAGAACAATAATAAT GAAAAGGCGCCGAGAC AGTT GTCTCGGCGCCTTTTT TATTATCTAACGATG TERM 2689 1808326 - 1808301 - T 100 -20.5 -4.61824 | opp_overlap 1808301, overlap 1808296 1808286 1808283 CAATAATAATGAAAA GGCGCCGAGAC AGTT GTCTCGGCGCC TTTTTTATTATCTAA TERM 2690 1808301 - 1808326 + T 100 -20.5 -5.60689 | opp_overlap 1808301 1808296 1808286 1808283 CAATAATAATGAAAA GGCGCCGAGAC AGTT GTCTCGGCGCC TTTTTTATTATCTAA lysP 1809768 - 1808338 - | lysine:H(+) symporter TERM 2691 1809869 - 1809838 - R 91 -6 -5.68438 | gap 1, overlap 1809831 1809826 1809867 TTAGCAAACAAAAAA GCCTTCTTGTCTGCT AAA AAC-GACAAAAAGAC TATAAGCCTTATATT TERM 2692 1809877 - 1809867 - R 73 -3.2 -5.1286 | overlap 1809838 1809870 TAAAAACGACAAAAA GACT ATA AGCC TTATATTAACCGTTG TERM 2693 1810156 - 1810133 - R 91 -6 -5.47218 | opp_overlap 1810136, overlap 1810136 TTTCAGCTAAAAAAA GAAGATCGCC TACT GGCAATCTTT CCATTTTAATTATTA TERM 2694 1810153 - 1810136 - R 88 -7.7 -4.8236 | opp_overlap 1810136, overlap 1810133 CAGCTAAAAAAAGAA GATCGCC TACT GGCAATC TTTCCATTTTAATTA LSA1818 1810255 - 1810169 - | hypothetical protein LSA1819 1811210 - 1810329 - | cell surface protein precursor TERM 2695 1810396 - 1810413 + g 80 -4.8 -5.09895 | opp_overlap 1810396 TTAATATTATAACGA CCAGCC TTCAGT GGTTGG TTTTTTAAATCAATC LSA1820 1813343 - 1811229 - | cell surface protein precursor TERM 2696 1813382 - 1813435 + r 84 -9.8 -3.68302 | opp_overlap 1813386 1813416 1813420 1813424 1813429 1813431, overlap 1813385 1813421 1813422 1813425 1813429 TTCTCAAACGACTAA TTAACTGTTACCTCAAGTGATTTC GACTGG GAAATCAACTGAGGTAACAGCTCA TTATTGAGCTGTTAC TERM 2697 1813385 - 1813432 + r 83 -11.5 -2.94313 | opp_overlap 1813386 1813416 1813420 1813424 1813429 1813431, overlap 1813382 1813421 1813422 1813425 1813429 TCAAACGACTAATTA ACTGTTACCTCAAGTGATTTC GACTGG GAAATCAACTGAGGTAACAGC TCATTATTGAGCTGT TERM 2698 1813431 - 1813386 - R 100 -17.2 -3.44222 | opp_overlap 1813385 1813382 1813421 1813422 1813425 1813429, overlap 1813416 1813420 1813424 1813429 CAAACGACTAATTAA CTGTTACCTCAAGTGATTTC GACTGG GAAATCAACTGAGGTAACAG CTCATTATTGAGCTG TERM 2699 1813422 - 1813453 + r 87 -12.4 -3.23715 | opp_overlap 1813386 1813420 1813416 1813424 1813429 1813431, overlap 1813385 1813382 1813421 1813425 1813429 ACTGGGAAATCAACT GAGGTAACAGCTCA TTAT TGAGCTGTTACTAC TATTATAACCATTGT TERM 2700 1813451 - 1813424 - R 81 -11.4 -2.6342 | opp_overlap 1813385 1813382 1813422 1813421 1813425 1813429, overlap 1813386 1813420 1813416 1813429 1813431 TGGGAAATCAACTGA GGTAACAGCTCA TTAT TGAGCTGTTACT ACTATTATAACCATT TERM 2701 1813425 - 1813450 + r 100 -14.9 -2.80252 | opp_overlap 1813386 1813424 1813420 1813416 1813429 1813431, overlap 1813385 1813382 1813422 1813421 1813429 GGGAAATCAACTGAG GTAACAGCTCA TTAT TGAGCTGTTAC TACTATTATAACCAT TERM 2702 1813446 - 1813429 - R 76 -9.9 -3.10677 | opp_overlap 1813385 1813382 1813429 1813425 1813422 1813421, overlap 1813386 1813424 1813420 1813416 1813431 AATCAACTGAGGTAA CAGCTCA TTAT TGAGCTG TTACTACTATTATAA TERM 2703 1813429 - 1813446 + r 78 -9.9 -3.29381 | opp_overlap 1813386 1813424 1813420 1813416 1813429 1813431, overlap 1813385 1813382 1813425 1813422 1813421 AATCAACTGAGGTAA CAGCTCA TTAT TGAGCTG TTACTACTATTATAA LSA1821 1814098 - 1813496 - | cell surface protein precursor TERM 2704 1814365 - 1814386 + r 86 -5.3 -5.42265 | CAACCGTCACCTGAT TAGTGAAAA TTAA TTTTCATTA TTTTTTGTAATTTCA TERM 2705 1814495 - 1814523 + r 100 -19.1 -4.30014 | opp_overlap 1814495 AAAAAGACAAAAAAA CAGGCTAGAAGAA GGG TTCTTCTAGCCTG TTTTAACTTAGTAAG TERM 2706 1814523 - 1814495 - R 100 -19.1 -5.9667 | opp_overlap 1814495 AAAAAGACAAAAAAA CAGGCTAGAAGAA GGG TTCTTCTAGCCTG TTTTAACTTAGTAAG LSA1822 1815059 - 1814544 - | hypothetical protein LSA1823 1815596 - 1815066 - | hypothetical protein LSA1824 1816220 - 1815693 - | GNAT family N-acetyltransferase TERM 2707 1815781 - 1815794 + g 70 -3.8 -4.82901 | opp_overlap 1815781 TGCGTTTGATAAGCA GTGG TAAAGC CCAC TTTTTGTAAACAACG TERM 2708 1816275 - 1816285 + H 76 -2.4 -5.59879 | GTTACTTACTTGTTT CCGC CAA GCCG TTTTTTATATTTGTC LSA1825 1816389 - 1816673 + | hypothetical protein LSA1826 1816724 - 1816677 - | hypothetical protein TERM 2709 1816921 - 1816948 + H 100 -16.4 -5.60993 | CCGCGGTTTCCAATC GTCCCTATTCGC AGAT GCGAGTAGGGAC TTTTTTTATGCAAAA TERM 2710 1816990 - 1816964 - H 79 -8.2 -4.18018 | overlap 1816966 TTTTTTTATGCAAAA TACTATTGAAAA CCA CTTTCAATAGCA CGTTTCAACTAATTT TERM 2711 1816988 - 1816966 - H 78 -8.6 -3.69216 | overlap 1816964 TTTTTATGCAAAATA CTATTGAAAA CCA CTTTCAATAG CACGTTTCAACTAAT nhaC 1817116 - 1818495 + | Na(+)/H(+) antiporter TERM 2712 1818546 - 1818502 - T 100 -20.4 -4.50193 | opp_overlap 1818507 1818544, overlap 1818507 ACTAATTAAGCAAAA TAAAAGAGGTTGCGACAAAA GTAAT TTTTGTCGCAACCTCTTTTT TGAATTCAAAATTTT TERM 2713 1818507 - 1818541 + T 100 -21 -5.15969 | opp_overlap 1818507 1818502 TTAAGCAAAATAAAA GAGGTTGCGACAAAAG TAA TTTTTGTCGCAACCTC TTTTTTGAATTCAAA TERM 2714 1818541 - 1818507 - T 100 -20.3 -5.18643 | opp_overlap 1818507, overlap 1818502 TTAAGCAAAATAAAA GAGGTTGCGACAAAA GTAAT TTTTGTCGCAACCTC TTTTTTGAATTCAAA TERM 2715 1818635 - 1818617 - T 72 -8.2 -3.53012 | opp_overlap 1818608 1818620, overlap 1818620 GCGTCTCTCGTCAAA CAACTGCT GAC AGCAGTTA TCCGCCGAGTTATGC TERM 2716 1818632 - 1818620 - T 74 -7.7 -3.90744 | opp_overlap 1818620 1818608, overlap 1818617 TCTCTCGTCAAACAA CTGCT GAC AGCAG TTATCCGCCGAGTTA LSA1828 1819404 - 1818811 - | integral membrane protein TERM 2717 1818989 - 1818978 - G 70 -5.8 -4.2679 | CAACTGGTAGGAAAA TCGC TAAG GCGA AAAAGCGCGCAAAGT pox2 1821243 - 1819510 - | pyruvate oxidase LSA1831 1821441 - 1822397 + | Dyp-type peroxidase TERM 2718 1822452 - 1822491 + F 81 -5.3 -5.13741 | gap 2, opp_overlap 1822465, overlap 1822458 1822465 TGTTGGGAATAATCG CCAATCTTAAAAAGCCGAC GAAC GTCGGCTTTTTAA--TTGC TTTTTGTTGACTTCC TERM 2719 1822458 - 1822487 + F 100 -16.7 -3.9407 | opp_overlap 1822465, overlap 1822452 1822465 GAATAATCGCCAATC TTAAAAAGCCGAC GAAC GTCGGCTTTTTAA TTGCTTTTTGTTGAC TERM 2720 1822480 - 1822465 - f 95 -10.4 -4.66833 | opp_overlap 1822458 1822452 1822465 CGCCAATCTTAAAAA GCCGAC GAAC GTCGGC TTTTTAATTGCTTTT TERM 2721 1822465 - 1822480 + F 100 -10.4 -4.97312 | opp_overlap 1822465, overlap 1822458 1822452 CGCCAATCTTAAAAA GCCGAC GAAC GTCGGC TTTTTAATTGCTTTT TERM 2722 1822732 - 1822777 + G 71 -8.3 -3.56821 | opp_overlap 1822738 1822739 1822741, overlap 1822745 TACGTGCAGGTTATC TCACAAGCATGTTCGATTGGG CTTT TCCAATCGTACTTGGTTGGGA TTTAGCCGGTGTCGT LSA1832 1822569 - 1823522 + | putative zinc-containing alcohol dehydrogenase (oxidoreductase) TERM 2723 1823536 - 1823556 + T 100 -15.5 -5.55664 | opp_overlap 1823536 AAATAGTACAAAAAA GCATCGCCA AGT TGGCGATGC TTTTTTTAATCGTGA TERM 2724 1823556 - 1823536 - T 100 -15.5 -5.38321 | opp_overlap 1823536 AAATAGTACAAAAAA GCATCGCCA AGT TGGCGATGC TTTTTTTAATCGTGA LSA1833 1824158 - 1823562 - | integral membrane protein LSA1834 1824347 - 1825060 + | integral membrane protein TERM 2725 1825090 - 1825071 - f 93 -12.2 -3.72968 | opp_overlap 1825071 ACTAGCATACTGAAA GGATTGGC GATT GCCAATCC TTTTTTGTTACCCTT TERM 2726 1825071 - 1825090 + F 100 -12.2 -5.4756 | opp_overlap 1825071 ACTAGCATACTGAAA GGATTGGC GATT GCCAATCC TTTTTTGTTACCCTT LSA1835 1825150 - 1826133 + | putative zinc-containing alcohol dehydrogenase (oxidoreductase) TERM 2727 1826173 - 1826139 - T 100 -18.8 -5.54894 | opp_overlap 1826139 1826141 AACCTACTAAAAAAA GAGCTAGCGACAAAAA TTA CTTTTGTCGCTAGCCC TTTTTTTAGTCTAAT TERM 2728 1826139 - 1826173 + T 100 -15.9 -5.59357 | opp_overlap 1826139, overlap 1826141 AACCTACTAAAAAAA GAGCTAGCGACAAAA ATTAC TTTTGTCGCTAGCCC TTTTTTTAGTCTAAT TERM 2729 1826141 - 1826171 + T 100 -17.1 -2.95308 | opp_overlap 1826139, overlap 1826139 CCTACTAAAAAAAGA GCTAGCGACAAAA ATTAC TTTTGTCGCTAGC CCTTTTTTTAGTCTA LSA1836 1826874 - 1826179 - | putative metal ion ABC transporter, membrane-spanning subunit LSA1837 1828517 - 1826871 - | putative metal ion ABC transporter, ATP-binding subunit TERM 2730 1827774 - 1827758 - GR 73 -3.5 -5.00616 | GTTGTTGCCAAAAAA GCCGCGG AAT CTCCGGC ATGAAATCCCGTAAA LSA1838 1829416 - 1828484 - | putative metal ion ABC transporter, membrane-spanning subunit TERM 2731 1829091 - 1829044 - GR 78 -5.4 -4.96523 | AAATCAATAATAAAA CGGCCAAAGCGGTCGCCATTAA AAAA CCATAGACCACCGCTTCCGCCG TTATCAGGGTACCGC LSA1839 1830192 - 1829365 - | putative metal ion ABC transporter, substrate-binding lipoprotein precursor LSA1840 1831664 - 1830204 - | hypothetical protein TERM 2732 1830989 - 1831006 + g 72 -7.1 -3.97057 | opp_overlap 1830988 1830989 GTTTTAAAACTAAAT CGATTAA TTGA TTAATCG TTTGGTTGGCTTGTG TERM 2733 1831075 - 1831088 + g 77 -3.7 -5.243 | overlap 1831076 ACTTGTCCTGTGATA CCGGC AGTA GCCGC TTTTTTAATAATTTC TERM 2734 1831384 - 1831373 - G 73 -7.2 -4.18762 | opp_overlap 1831362 1831372 AATCCCGATTTAAAA CGGC TTTA GCCG CTGATTTTGCAGGTT TERM 2735 1832115 - 1832087 - g 75 -5.9 -4.63486 | opp_overlap 1832088, overlap 1832088 AGGCCTTCAAGAAAA TGCGCTCGTCGAC ACC ACCAACGAGCACT TCTAAAACGAAGAAA TERM 2736 1832114 - 1832088 - g 74 -9.4 -3.3761 | opp_overlap 1832088, overlap 1832087 GGCCTTCAAGAAAAT GCGCTCGTCGAC ACC ACCAACGAGCAC TTCTAAAACGAAGAA TERM 2737 1832357 - 1832324 - g 72 -7.5 -3.92373 | gap 1, opp_overlap 1832324 CAGGCGATTTACAAA TCACTG-GTGTCCTCA ATA TGAAGACCCTCAGCGA TTTCAAAGATAACAC TERM 2738 1832716 - 1832699 - g 95 -7.7 -5.16572 | ATCCAACTCAAAAAA CGGCCTT CTTG AAAGCCG CTAAGAAAATTATCA LSA1841 1831879 - 1833348 + | ABC transporter permease/transmembrane protein LSA1842 1833364 - 1834026 + | ABC transporter ATP-binding protein TERM 2739 1834039 - 1834071 + F 100 -13 -4.65747 | opp_overlap 1834039 1834043, overlap 1834043 TAGAATAGTCTAAAA TAAACTGTCGATAG TAAGC TTATCGACAGTTTA TTTTATTGAAAATTG TERM 2740 1834071 - 1834039 - f 93 -12.3 -4.20712 | opp_overlap 1834039 1834043, overlap 1834043 TAGAATAGTCTAAAA TAAACTGTCGATA GTAAGCT TATCGACAGTTTA TTTTATTGAAAATTG TERM 2741 1834043 - 1834067 + F 100 -9.4 -4.87892 | opp_overlap 1834039 1834043, overlap 1834039 ATAGTCTAAAATAAA CTGTCGATAG TAAGC TTATCGACAG TTTATTTTATTGAAA TERM 2742 1834067 - 1834043 - f 90 -8.7 -4.67651 | opp_overlap 1834043 1834039, overlap 1834039 ATAGTCTAAAATAAA CTGTCGATA GTAAGCT TATCGACAG TTTATTTTATTGAAA ogt 1834120 - 1834608 + | methylated-DNA-protein-cysteineS-methyltransferase TERM 2743 1834600 - 1834646 + T 100 -8.9 -5.11937 | gap 1, opp_overlap 1834613, overlap 1834613 CAGTTATTAGCCCTC GAACAATAAAAAAGGTGTGCCC ACAT GGGCACACCTTTTTAAAT-TAC TTTTTTAACGTTCTT TERM 2744 1834634 - 1834613 - T 100 -15.9 -5.64873 | opp_overlap 1834600 1834613 TCGAACAATAAAAAA GGTGTGCCC ACAT GGGCACACC TTTTTAAATTACTTT TERM 2745 1834613 - 1834634 + T 100 -15.9 -4.788 | opp_overlap 1834613, overlap 1834600 TCGAACAATAAAAAA GGTGTGCCC ACAT GGGCACACC TTTTTAAATTACTTT aqpZ 1835304 - 1834651 - | aquaporine Z TERM 2746 1834959 - 1834949 - G 79 -3.2 -5.27477 | ACTTCAACTAAAAAA GCAA CTC CTGC GCCGATTTTAGGGAA LSA1845 1835593 - 1835706 + | hypothetical protein TERM 2747 1835747 - 1835721 - T 100 -19.5 -5.19212 | opp_overlap 1835721 AGCACTATCAAAAAA GGGCCGCCAAC TAACC GTTGGCGGCCC TTTTTATTTCCCGGG TERM 2748 1835721 - 1835747 + T 100 -19.5 -5.27335 | opp_overlap 1835721 AGCACTATCAAAAAA GGGCCGCCAAC TAACC GTTGGCGGCCC TTTTTATTTCCCGGG recQ2 1837514 - 1835766 - | ATP-dependent DNA helicase (RecQ) TERM 2749 1837575 - 1837565 - R 91 -5.4 -5.89921 | overlap 1837568 ATCATAACAAAAAAA CAAC ACC GTTG CGGTCAAAATAAAAA TERM 2750 1837580 - 1837568 - R 70 -3.3 -4.98468 | overlap 1837565 ATAACAAAAAAACAA CACCG TTG CGGTC AAAATAAAAACAGTC TERM 2751 1837612 - 1837591 - R 100 -7.3 -5.45802 | opp_overlap 1837591 CGGTCAAAATAAAAA CAGTCCCTA ATAC CAAGGACTG TTCTCTATTATTAAT LSA1847 1838187 - 1837627 - | integral membrane protein TERM 2752 1837729 - 1837717 - G 81 -4.1 -5.40072 | TGGTGGGTAAAAAAA GCTGA CGA TCAAC GTGATAAAGTTCAAA LSA1848 1838302 - 1838634 + | hypothetical protein TERM 2753 1838742 - 1838706 - f 80 -10.1 -3.5394 | AAACCGGCCGCTAAA GCACGGCACCGTTGG ACAAAAG CCATCAGCACCGTGC CATTTACCATTAAAA LSA1849 1838739 - 1839008 + | hypothetical protein TERM 2754 1839410 - 1839388 - g 83 -12 -2.62463 | opp_overlap 1839391, overlap 1839387 1839391 CCGATGACGGATAAC CAAGCAGCGG AAG CCTCTGCTTG CTACGGTGGTATGAC LSA1850 1839076 - 1839588 + | hypothetical protein TERM 2755 1839952 - 1839939 - f 70 -8.1 -3.3197 | overlap 1839930 ACAGCAGGCTCATAA GACGC CCCA GCGTC GCCATAGTGCGTTCA LSA1851 1840481 - 1840864 + | extracellular small protein precursor TERM 2756 1840915 - 1840862 - T 100 -13 -4.98857 | gap 2, opp_overlap 1840875, overlap 1840873 1840875 ACTGAATTAGAAAAA TAACTAGAAAAGAGGCTCAAGCAAAA TTAT TTTTGCTTGAGCCT-TTTT-TAGTGA ATGAATTCAATGCTA TERM 2757 1840906 - 1840873 - T 100 -15.5 -4.65512 | opp_overlap 1840875, overlap 1840862 1840875 AAAATAACTAGAAAA GAGGCTCAAGCAAAA TTAT TTTTGCTTGAGCCTT TTTTAGTGAATGAAT TERM 2758 1840875 - 1840904 + T 100 -18.1 -5.1675 | opp_overlap 1840875 1840873 1840862 AATAACTAGAAAAGA GGCTCAAGCAAAA TTAT TTTTGCTTGAGCC TTTTTTAGTGAATGA TERM 2759 1840904 - 1840875 - T 100 -18.1 -3.9074 | opp_overlap 1840875, overlap 1840873 1840862 AATAACTAGAAAAGA GGCTCAAGCAAAA TTAT TTTTGCTTGAGCC TTTTTTAGTGAATGA LSA1852 1841448 - 1840909 - | isochorismatase/nicotamidase family hydrolase TERM 2760 1841639 - 1841629 - g 73 -5.4 -4.67607 | TTTCTAACAAAGAAA TTGG CGC CCAA GTCCATCTCACTGGG LSA1853 1841562 - 1841960 + | AsnC/Lrp family transcriptional regulator TERM 2761 1841988 - 1841951 - T 100 -15.9 -5.04325 | opp_overlap 1841955, overlap 1841955 TTTAAATGATAAAAA GAAAGGCTAAATGTTTC GTAT GAAACATTTAGCCTTTT TTAGAGTTGTTTTAA TERM 2762 1841955 - 1841984 + T 100 -16.7 -5.11937 | opp_overlap 1841955 1841951 AATGATAAAAAGAAA GGCTAAATGTTTC GTAT GAAACATTTAGCC TTTTTTAGAGTTGTT TERM 2763 1841984 - 1841955 - T 100 -16.7 -5.00267 | opp_overlap 1841955, overlap 1841951 AATGATAAAAAGAAA GGCTAAATGTTTC GTAT GAAACATTTAGCC TTTTTTAGAGTTGTT LSA1854 1842630 - 1841989 - | DNA alkylation repair enzyme gpm5 1843251 - 1842640 - | phosphoglycerate mutase TERM 2764 1843312 - 1843350 + r 100 -16.2 -2.73338 | opp_overlap 1843317, overlap 1843317 CACCCATTTCAATAG CAAAAGAGGCTACGACAA ATT TTGCCGTAGCCTCTTTTA ATTTGACCGCCTTAT TERM 2765 1843317 - 1843345 + r 100 -16.1 -4.54727 | opp_overlap 1843317, overlap 1843312 ATTTCAATAGCAAAA GAGGCTACGACAA ATT TTGCCGTAGCCTC TTTTAATTTGACCGC TERM 2766 1843345 - 1843317 - R 100 -18.3 -4.43012 | opp_overlap 1843317 1843312 ATTTCAATAGCAAAA GAGGCTACGACAA ATT TTGCCGTAGCCTC TTTTAATTTGACCGC araA 1844786 - 1843362 - | L-arabinose isomerase TERM 2767 1844879 - 1844843 - R 86 -12.5 -2.90075 | opp_overlap 1844843, overlap 1844852 TTGCGCTTAACGACA TTTGTCAAATCAGCGAT TCC ATCGCTAATCTGTCAAA TTAAGTTAATGCTCA TERM 2768 1844870 - 1844852 - R 72 -8.2 -3.56821 | opp_overlap 1844843, overlap 1844843 ACGACATTTGTCAAA TCAGCGAT TCC ATCGCTAA TCTGTCAAATTAAGT araD 1845809 - 1845075 - | L-ribulose-5-phosphate 4-epimerase araB 1847430 - 1845820 - | L-ribulokinase araT 1848832 - 1847450 - | D-arabinose:H(+) symporter TERM 2769 1848822 - 1848834 + g 75 -3.3 -5.17353 | CTTGGAATTTTTTTA GCCTG CGT CATGC TTTTTTCCTCCATCT TERM 2770 1849123 - 1849088 - R 100 -17.8 -3.74056 | opp_overlap 1849095, overlap 1849095 GAATAATTATGGAAA CTAAAAAGGGGCTATC GTCA GATAGCCCCTTTTGAG ATACGTCCTTATTTA TERM 2771 1849116 - 1849095 - R 100 -14.5 -5.00138 | opp_overlap 1849095, overlap 1849088 TATGGAAACTAAAAA GGGGCTATC GTCA GATAGCCCC TTTTGAGATACGTCC TERM 2772 1849095 - 1849116 + r 100 -14.5 -4.14739 | opp_overlap 1849095 1849088 TATGGAAACTAAAAA GGGGCTATC GTCA GATAGCCCC TTTTGAGATACGTCC araR 1850208 - 1849132 - | AraC family regulator TERM 2773 1850340 - 1850393 + r 95 -12.7 -4.2204 | opp_overlap 1850349, overlap 1850349 CGTAAACCCACTTTA TTAAAAAAAGACGCTGCAGACAACA TTCC TTTTGTCTACAGCGTCTTCTTATAA TTATTTCTTCAAATT TERM 2774 1850349 - 1850384 + r 100 -13.4 -3.93867 | opp_overlap 1850349, overlap 1850340 ACTTTATTAAAAAAA GACGCTGCAGACAACA TTCC TTTTGTCTACAGCGTC TTCTTATAATTATTT TERM 2775 1850384 - 1850349 - R 100 -15.6 -5.52986 | opp_overlap 1850349 1850340 ACTTTATTAAAAAAA GACGCTGCAGACAACA TTCC TTTTGTCTACAGCGTC TTCTTATAATTATTT LSA1862 1850537 - 1850394 - | hypothetical protein LSA1863 1851019 - 1850537 - | integral membrane protein LSA1864 1851340 - 1851032 - | integral membrane protein LSA1865 1851976 - 1851437 - | hypothetical protein TERM 2776 1851949 - 1851959 + g 74 -4 -4.97158 | TTAGTAATTTCAGAT TTTG GGC CAAA TTTTGTTTGGTATCC LSA1866 1852510 - 1852043 - | hypothetical protein TERM 2777 1852238 - 1852223 - G 75 -5.4 -4.82154 | AATGGACATTAAAAA GACGTT ACAC AACGCC GTAATTAACATCTGT TERM 2778 1852541 - 1852575 + H 100 -16.6 -2.59431 | opp_overlap 1852542, overlap 1852537 1852551 ATGGGCATAAAAAAA ACAGCACAAAGTAGGG TAT TCCTACTTTGTGCTGA TCAATTATACGCACG TERM 2779 1852574 - 1852542 - H 100 -19.4 -5.93809 | opp_overlap 1852541 1852537 1852551 TGGGCATAAAAAAAA CAGCACAAAGTAGG GTATT CCTACTTTGTGCTG ATCAATTATACGCAC LSA1867 1852709 - 1853275 + | isoleucine patch superfamily acetyltransferase TERM 2780 1853283 - 1853302 + T 100 -12.2 -5.47399 | opp_overlap 1853283 CTAAATAATAAAAAA GGACTGAC AAAT GTCAGTCC TTTTTTTAGGCTTCA TERM 2781 1853302 - 1853283 - T 100 -12.2 -5.72254 | opp_overlap 1853283 CTAAATAATAAAAAA GGACTGAC AAAT GTCAGTCC TTTTTTTAGGCTTCA LSA1868 1854072 - 1853308 - | MerR family transcriptional regulator LSA1869 1855662 - 1854136 - | putative glycine/betaine/carnitine/choline ABC transporter, substrate binding and membrane-spanning subunits TERM 2782 1854679 - 1854693 + g 70 -2.8 -5.03145 | overlap 1854681 GTATGCCATCTTGAA TTGTTC TTG GAGCGA TTTTTTAGCGAGTTG LSA1870 1856600 - 1855662 - | putative glycine betaine/carnitine/choline ABC transporter, ATP-binding subunit TERM 2783 1856665 - 1856690 + H 78 -6.1 -4.88485 | opp_overlap 1856658 1856667, overlap 1856667 AGAAGAAGGCCAACC AATTGACGTGC TTGG GCCCGTCAATC TTATTTTTTTGATTC TERM 2784 1856667 - 1856688 + H 81 -8.7 -4.01925 | opp_overlap 1856658 1856667, overlap 1856665 AAGAAGGCCAACCAA TTGACGTGC TTGG GCCCGTCAA TCTTATTTTTTTGAT TERM 2785 1856688 - 1856667 - H 73 -8.7 -3.38727 | opp_overlap 1856667 1856665, overlap 1856658 AAGAAGGCCAACCAA TTGACGTGC TTGG GCCCGTCAA TCTTATTTTTTTGAT gshR 1856760 - 1858094 + | glutathione reductase TERM 2786 1858086 - 1858141 + T 84 -4.3 -5.43553 | gap 1, opp_overlap 1858099, overlap 1858099 AGTGATTTGAAATAT TACTA-CTAAAAAAGTGTTGAAGACC GATTG GGCCTTCAACACTTTTTTAAATAACA TTTTCTTTTTTCGCT TERM 2787 1858099 - 1858127 + T 100 -11.8 -5.09225 | opp_overlap 1858099, overlap 1858086 ATTACTACTAAAAAA GTGTTGAAGACC GATTG GGCCTTCAACAC TTTTTTAAATAACAT TERM 2788 1858127 - 1858099 - T 100 -14 -5.19212 | opp_overlap 1858099 1858086 ATTACTACTAAAAAA GTGTTGAAGACC GATTG GGCCTTCAACAC TTTTTTAAATAACAT LSA1872 1859604 - 1858132 - | putative drug:H(+) antiporter TERM 2789 1859724 - 1859705 - R 79 -10.8 -2.96216 | TTTTATTATCATACA CCTTCAAG TTGA CTTGAAGG CAAACAAAAAAGGCC LSA1873 1860353 - 1859766 - | hypothetical protein LSA1874 1860921 - 1860439 - | MarR family transcriptional regulator TERM 2790 1861391 - 1861364 - g 95 -7.6 -5.00616 | opp_overlap 1861364 GTCGCCGTCAAAAAA GGCCACTGGGTA ACAG TTCCCGATGGCC TTGATGCAATTAAAT LSA1875 1861091 - 1862032 + | putative zinc-containing alcohol dehydrogenase (oxidoreductase) LSA1876 1862715 - 1862029 - | integral membrane protein LSA1877 1863554 - 1862712 - | hypothetical protein TERM 2791 1862773 - 1862801 + g 100 -11.1 -5.626 | overlap 1862776 ACACCATCGTGATTA TGATCCGCTAACG CAA TGTTAGCGGATTG TTTTTTTATCGACTC TERM 2792 1862776 - 1862798 + g 100 -12.8 -4.89054 | overlap 1862773 CCATCGTGATTATGA TCCGCTAACG CAA TGTTAGCGGA TTGTTTTTTTATCGA TERM 2793 1863681 - 1863702 + r 100 -8.7 -5.00138 | opp_overlap 1863681 TAAGACAACAAAAAA GGCTGAACC CTAA GGTTCAACC TTTTTAATTTGCGTG TERM 2794 1863702 - 1863681 - R 100 -10.9 -5.64304 | opp_overlap 1863681 TAAGACAACAAAAAA GGCTGAACC CTAA GGTTCAACC TTTTTAATTTGCGTG TERM 2795 1865171 - 1865199 + r 71 -5.2 -4.57482 | overlap 1865168 1865174 GGATATTCTCCTCGA CCACCTGTGTCG GTTTA CGGTACGGGTAG TTTATTTCTCACTAG TERM 2796 1866546 - 1866565 + r 88 -10.8 -3.66803 | opp_overlap 1866545 1866544 1866554 TTCTGTCCTACAACC CCAAGAAG CAAG CTTCTTGG TTTGGGCTCTTCCCC TERM 2797 1867011 - 1866989 - R 71 -4.9 -4.56978 | opp_overlap 1867006, overlap 1866990 TTTTCAAAGAACAAA GTTTGAGAG TAGAC CTCTCAAAA CTAAACAAAGTTTTG TERM 2798 1867010 - 1866990 - R 70 -8.4 -3.33464 | opp_overlap 1867006, overlap 1866989 TTTCAAAGAACAAAG TTTGAGAG TAGAC CTCTCAAA ACTAAACAAAGTTTT TERM 2799 1867081 - 1867100 + r 72 -9.2 -2.65808 | opp_overlap 1867072 1867069, overlap 1867078 1867078 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 2800 1868773 - 1868783 + r 70 -3.2 -4.96646 | overlap 1868769 TCAAAGATCTACTGT GTTG AAA CAGC TTTTTAATTATATCA TERM 2801 1869098 - 1869119 + r 100 -8.7 -5.00138 | opp_overlap 1869098 TAGATAACAAAAAAA GGCTGAACC CTAA GGTTCAACC TTTTTAATTTACGTG TERM 2802 1869119 - 1869098 - R 100 -10.9 -5.9218 | opp_overlap 1869098 TAGATAACAAAAAAA GGCTGAACC CTAA GGTTCAACC TTTTTAATTTACGTG TERM 2803 1870587 - 1870615 + r 71 -5.2 -4.57482 | overlap 1870584 1870590 GGATATTCTCCTCGA CCACCTGTGTCG GTTTA CGGTACGGGTAG TTTATTTCTCACTAG TERM 2804 1871962 - 1871981 + r 88 -10.8 -3.66803 | opp_overlap 1871961 1871960 1871970 TTCTGTCCTACAACC CCAAGAAG CAAG CTTCTTGG TTTGGGCTCTTCCCC TERM 2805 1872427 - 1872405 - R 71 -4.9 -4.56978 | opp_overlap 1872422, overlap 1872406 TTTTCAAAGAACAAA GTTTGAGAG TAGAC CTCTCAAAA CTAAACAAAGTTTTG TERM 2806 1872426 - 1872406 - R 70 -8.4 -3.33464 | opp_overlap 1872422, overlap 1872405 TTTCAAAGAACAAAG TTTGAGAG TAGAC CTCTCAAA ACTAAACAAAGTTTT TERM 2807 1872497 - 1872516 + r 72 -9.2 -2.65808 | opp_overlap 1872488 1872485, overlap 1872494 1872494 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 2808 1873830 - 1873850 + r 73 -6.2 -4.42619 | gap 1 AAACCATCTTTCAAC CCT-ACACC ATGC GGTGTTAGG TTTTATGCGGTATTA TERM 2809 1874189 - 1874199 + r 70 -3.2 -4.96646 | overlap 1874185 TCAAAGATCTACTGT GTTG AAA CAGC TTTTTAATTATATCA TERM 2810 1874322 - 1874336 + r 76 -5.8 -4.65969 | opp_overlap 1874321 1874322 GAAATAAATAACAAG TGTTTT TCA AAAACA TTTTAATTATTTATT TERM 2811 1874448 - 1874488 + r 100 -14.9 -3.36749 | gap 1, opp_overlap 1874450, overlap 1874450 1874453 AAAAAGATTCAAAAA AAGAAGACCCGC-GACAC AAATCC GTGTCTGCGGGTCTTCTC TTGGTATTAAGCGTA TERM 2812 1874450 - 1874486 + r 100 -17.5 -3.25073 | gap 1, opp_overlap 1874450, overlap 1874448 1874453 AAAGATTCAAAAAAA GAAGACCCGC-GACAC AAATCC GTGTCTGCGGGTCTTC TCTTGGTATTAAGCG TERM 2813 1874486 - 1874450 - R 100 -18.2 -5.54264 | gap 1, opp_overlap 1874450 1874448 1874453 AAAGATTCAAAAAAA GAAGACCCGC-GACACA AATC CGTGTCTGCGGGTCTTC TCTTGGTATTAAGCG TERM 2814 1874453 - 1874483 + r 100 -13.4 -3.76169 | gap 1, opp_overlap 1874450, overlap 1874450 1874448 GATTCAAAAAAAGAA GACCCGC-GACAC AAATCC GTGTCTGCGGGTC TTCTCTTGGTATTAA LSA1878 1876119 - 1874539 - | putative drug resistance ABC transporter, two ATP-binding subunits TERM 2815 1876182 - 1876155 - R 100 -16.4 -4.63527 | opp_overlap 1876155 TCATGACTCTAAAAA GCCAACCGTTTC ATGT GAAACGGCTGGC TTTCTACCATTGACA TERM 2816 1876155 - 1876182 + r 100 -14.2 -3.92522 | opp_overlap 1876155 TCATGACTCTAAAAA GCCAACCGTTTC ATGT GAAACGGCTGGC TTTCTACCATTGACA gidA 1878136 - 1876244 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 2817 1877259 - 1877277 + g 73 -5.2 -4.7033 | overlap 1877261 ATTTGGTGGCGAGGC TTATCCGC AAA GCGGACGA TTTTATCTTCAATTG TERM 2818 1877766 - 1877790 + g 70 -7.1 -3.81741 | overlap 1877767 GATTCAGCAATGCCT TGACGGAGTGT TAA GTGCTCCGTCG TTTCGATTGTCCGTT trmE 1879555 - 1878167 - | tRNA modification GTPase TrmE TERM 2819 1879643 - 1879594 - R 100 -8.7 -5.61596 | gap 2, opp_overlap 1879594 AGCTGCATAAAAAAA GCGCTTAGCGTCCACCCCTCCCG TCATTG CGCAAGGGGTGGACA--AAGCAC TTTCACTACTTTATC LSA1881 1880436 - 1879714 - | putative single-stranded nucleic acid binding protein TERM 2820 1880455 - 1880482 + r 89 -7.9 -5.02502 | gap 1, opp_overlap 1880458, overlap 1880448 TAAACCTCCGCTCAT TAAGCGTC-AGT TTGTC ACTGGACGCTTA TTTTTATCTAATATC pepF2 1882321 - 1880528 - | oligoendopeptidase F2 TERM 2821 1881378 - 1881388 + g 81 -5.4 -5.20216 | ATAAATTCAGCAGCT TCGT CAT ACGA TTTTTTAGTCATCTG TERM 2822 1881502 - 1881489 - G 71 -3.1 -5.00616 | gap 1, opp_overlap 1881489 TTCCGGTTCAAAAAA GCAACC AGT GGT-GC TTTATTTTGGCTGAC LSA1883 1882478 - 1882828 + | hypothetical protein TERM 2823 1882835 - 1882873 + T 100 -22 -3.11222 | opp_overlap 1882840, overlap 1882840 1882871 GATTATTAAAACACA AAAAAGACCGACCAGCAT AAA ATGCTGGTCGGTCTTTTA ATTTTAAAATTAACG TERM 2824 1882868 - 1882840 - T 100 -21.9 -5.63645 | opp_overlap 1882835 1882840 TTAAAACACAAAAAA GACCGACCAGCAT AAA ATGCTGGTCGGTC TTTTAATTTTAAAAT TERM 2825 1882840 - 1882868 + T 100 -21.9 -4.67641 | opp_overlap 1882840, overlap 1882835 TTAAAACACAAAAAA GACCGACCAGCAT AAA ATGCTGGTCGGTC TTTTAATTTTAAAAT oxaA2 1883716 - 1882883 - | membrane protein chaperone oxaA TERM 2826 1883680 - 1883695 + g 72 -7.6 -3.8374 | opp_overlap 1883679 1883676 1883680 ATAAGAATAAACTAG CGACTA ATAA TAGTCG TTTGCGATTTTTTGA TERM 2827 1883738 - 1883754 + r 84 -10.9 -3.5782 | opp_overlap 1883741, overlap 1883741 TCCCTCACTTATTCA GAAGCAG AAT CTGCTTC TTCCTTTAATAACTT rnpA 1884093 - 1883731 - | ribonuclease P TERM 2828 1884157 - 1884140 - R 100 -9.9 -5.89921 | overlap 1884148 AGGATAATAAAAAAA CCACTGA AGCA TCAGTGG CCTATGCAGATAATA rpmH 1884299 - 1884159 - | 50S ribosomal protein L34