TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.665469 %AT, 1712838 nt, 9610 terms. Intergenic: 0.686506 %AT, H2T: 324973 nt, 2582 terms; T2T: 53418 nt, 1335 terms; H2H: 73743 nt, 1187 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|56707107|ref|NC_006529.1| Lactobacillus salivarius UCC118 plasmid pSF118-20, complete sequence (length 20417) pSF118-20_01 2127 - 67 - | putative nickase TERM 1 151 - 165 + g 80 -6.4 -4.67904 | CCATTCCGTCTCTTT TAAGCC TTG GGCTTG TTTTTGCCGTTGATA TERM 2 282 - 294 + g 78 -6.9 -4.29325 | overlap 275 TGAATGGCTCGTAAT GCCGC ATT GTGGC TTTTCGATATTGATC TERM 3 1491 - 1507 + g 80 -2.9 -5.67063 | overlap 1493 1494 CAAAGGACTTTTCAC TGATCCG ATC CGGAATA TTTTTTTGTGCTAAG TERM 4 2171 - 2185 + H 90 -11.4 -3.42346 | GGGTTTGACTTTGTT GTCGCC ATC GGCGAC TTCTAATACAGTCTT pSF118-20_02 2399 - 2611 + | hypothetical protein pSF118-20_03 2628 - 2906 + | hypothetical protein TERM 5 2914 - 2888 - T 100 -10.9 -5.2166 | opp_overlap 2888 GAATAAGCTAAAAAA CGATCAGCCTA GATTG TAGGCTGGTCG TTTTTACCTTTCGGT TERM 6 2888 - 2914 + T 100 -13.1 -4.81851 | opp_overlap 2888 GAATAAGCTAAAAAA CGATCAGCCTA GATTG TAGGCTGGTCG TTTTTACCTTTCGGT pSF118-20_04 3787 - 3038 - | hypothetical protein pSF118-20_05 4028 - 3837 - | hypothetical protein TERM 7 4074 - 4092 + r 70 -3.8 -4.93365 | TAACTATCGCCAATT TAGCCACT CAA GGTGCCTA TTTTTGCTTCTAAGC repA 5282 - 4179 - | putative replication initiation protein TERM 8 4586 - 4596 + g 82 -5.4 -5.29885 | overlap 4587 CATTAGCATGTTTAA CCAA ATC TTGG TTTTGTTTTTGAATT TERM 9 4820 - 4846 + g 87 -11.7 -3.2964 | overlap 4826 4844 TTTCAACGGTCTCCC GCGAAGGTCTA TTTTT TAGACTTTCGC TTGTAGCAAGGGTTT TERM 10 5444 - 5460 + r 100 -8 -5.86976 | TGTGTCTATTTCCTG GTTGCC CATTC GGCAAC TTTTTTATTTTCTAA TERM 11 5485 - 5518 + r 100 -11.2 -5.64873 | opp_overlap 5485 TTCTAACAACAAAAA TGGACTAAATAGCT TCGGTT AGCTACTTAGTCCA TTTTTTGTTGTTAAC TERM 12 5518 - 5485 - R 100 -13.4 -5.29445 | opp_overlap 5485 TTCTAACAACAAAAA TGGACTAAATAGCT TCGGTT AGCTACTTAGTCCA TTTTTTGTTGTTAAC TERM 13 5636 - 5595 - R 79 -8.1 -4.07604 | overlap 5589 5596 ACAAATCAAGAACAA TGTTCAGTCGATTTAGACC GGCA AGTTAAAATCGACTGAACC TAAGTAGCTCTCTGT TERM 14 5635 - 5596 - R 87 -11.6 -3.02936 | overlap 5589 5595 CAAATCAAGAACAAT GTTCAGTCGATTTAGACC GGCA AGTTAAAATCGACTGAAC CTAAGTAGCTCTCTG TERM 15 5657 - 5715 + r 100 -12.7 -3.9716 | opp_overlap 5640 5667 5674, overlap 5640 5661 5667 5674 AGCTCTCTGTCAGCT ACTTGCTAAACAAAAGATCTCTGATTC CTCGT GAATCGGGGATTTTTTGTTTAGCTTGA TCTTTTATTCGGTTG TERM 16 5661 - 5711 + r 100 -20.9 -3.61106 | opp_overlap 5667 5674, overlap 5657 5667 5674 CTCTGTCAGCTACTT GCTAAACAAAAGATCTCTGATTC CTCGT GAATCGGGGATTTTTTGTTTAGC TTGATCTTTTATTCG TERM 17 5667 - 5705 + r 100 -12.7 -3.81461 | opp_overlap 5667 5674, overlap 5661 5657 5674 CAGCTACTTGCTAAA CAAAAGATCTCTGATTC CTCGT GAATCGGGGATTTTTTG TTTAGCTTGATCTTT TERM 18 5674 - 5698 + r 100 -7.2 -5.67283 | opp_overlap 5674 5667, overlap 5667 5661 5657 TTGCTAAACAAAAGA TCTCTGATTC CTCGT GAATCGGGGA TTTTTTGTTTAGCTT pSF118-20_07 6122 - 5871 - | hypothetical protein pSF118-20_08 6935 - 6126 - | putative plasmid partition protein pSF118-20_09 7583 - 7011 - | putative resolvase TERM 19 7879 - 7835 - H 86 -10.1 -3.75193 | opp_overlap 7845 7846 7850, overlap 7836 7850 AACGACACACTGAAA CGGCTGAAAGCCAAAGTTAGT TAC ACTAACTTTGCTTTCCTGCCA CACGGCGAGTGGGCG TERM 20 7878 - 7836 - H 86 -11.4 -2.84393 | opp_overlap 7845 7846 7850, overlap 7835 7850 ACGACACACTGAAAC GGCTGAAAGCCAAAGTTAGT TAC ACTAACTTTGCTTTCCTGCC ACACGGCGAGTGGGC TERM 21 7845 - 7869 + H 77 -8.7 -3.72576 | opp_overlap 7836 7835 7850, overlap 7846 7850 TGAAACGGCTGAAAG CCAAAGTTAGT TAC ACTAACTTTGC TTTCCTGCCACACGG TERM 22 7846 - 7868 + H 90 -12.2 -2.83403 | opp_overlap 7836 7835 7850, overlap 7845 7850 GAAACGGCTGAAAGC CAAAGTTAGT TAC ACTAACTTTG CTTTCCTGCCACACG TERM 23 7850 - 7864 + H 74 -7.2 -4.10552 | opp_overlap 7850 7836 7835, overlap 7846 7845 CGGCTGAAAGCCAAA GTTAGT TAC ACTAAC TTTGCTTTCCTGCCA TERM 24 7864 - 7850 - H 72 -7.2 -3.84451 | opp_overlap 7846 7845 7850, overlap 7836 7835 CGGCTGAAAGCCAAA GTTAGT TAC ACTAAC TTTGCTTTCCTGCCA TERM 25 7957 - 7973 + H 72 -8.7 -3.13553 | overlap 7956 7964 GGTTCAGCTTGTGGG TGTGGGT AAA ACCCACG GTTTGTCTTGAATTA pSF118-20_10 8112 - 9443 + | putative mercury(II) reductase TERM 26 9456 - 9485 + F 95 -8.8 -5.26918 | gap 1, opp_overlap 9456 TAAAAACTAAAAAAA CTGACTTATCTCA TAACT TGAG-TAAGTCAG TTTTTTATCGCCTAT TERM 27 9485 - 9456 - f 100 -8.8 -5.85011 | gap 1, opp_overlap 9456 TAAAAACTAAAAAAA CTGACTTATCTCA TAACT TGAG-TAAGTCAG TTTTTTATCGCCTAT pSF118-20_11 9714 - 10343 + | hypothetical protein TERM 28 10575 - 10615 + F 100 -12.5 -4.4261 | opp_overlap 10577, overlap 10577 TTAGTAGAGAAATAA AAGCGGACGGTTAACGCAG ATA CTGCGTAAGTCGCCCGCTG TTTTCGTCTTAACCA TERM 29 10613 - 10577 - f 100 -12.9 -5.06016 | opp_overlap 10575 10577 AGTAGAGAAATAAAA GCGGACGGTTAACGCAG ATA CTGCGTAAGTCGCCCGC TGTTTTCGTCTTAAC TERM 30 10577 - 10613 + F 100 -15.1 -3.81853 | opp_overlap 10577, overlap 10575 AGTAGAGAAATAAAA GCGGACGGTTAACGCAG ATA CTGCGTAAGTCGCCCGC TGTTTTCGTCTTAAC TERM 31 10819 - 10877 + F 100 -12.1 -4.32857 | gap 1, opp_overlap 10819 ATAAGAACATGTAAA TCGCAAATCATCACTACCTGTTGTGCTA TAAT TATGGTAA-AGGTGGTGATGATTTGCGA TTTATATTTAAGGCA TERM 32 11150 - 11127 - g 79 -9.6 -3.15324 | overlap 11126 TATCTTCATCAAAAG TCTGATGGTC AAGT GACCATCAGT AAGAAAGCCATTGAA TERM 33 11392 - 11368 - g 91 -4.5 -5.80817 | opp_overlap 11368 CTGAACAGAAAAAAA TTAAAATCA GACTCGT TGATTTTAA TGAGTTGGACGCTAA pSF118-20_12 10872 - 11432 + | hypothetical protein pSF118-20_13 11444 - 11629 + | hypothetical protein TERM 34 12102 - 12055 - g 76 -7.8 -4.05583 | overlap 12099 12100 GCAATATGAAAAAGA TTCGACTTCTCTGCAAGATCGC GTGA GCGATGCTACAGACAAAACGAA GGAAGCCTTCAGTAA TERM 35 12113 - 12099 - g 76 -6.4 -4.61199 | overlap 12055 12100 12108 ATGCTACAGACAAAA CGAAGG AAG CCTTCA GTAAGGGCGCAAAGA gls14 11657 - 12199 + | putative general stress-like protein pSF118-20_15 12214 - 12465 + | putative stress-like protein pSF118-20_16 12477 - 12617 + | hypothetical protein pSF118-20_17 12815 - 13030 + | hypothetical protein TERM 36 13045 - 13065 + T 100 -9.8 -5.42198 | opp_overlap 13048 AATTATCATTTTTAA GAAGACCA AAATC TGGTCTTC TTTTATTTTTTCACG TERM 37 13127 - 13137 + T 70 -4.6 -4.74103 | overlap 13114 TACGCGGCTTATGTG GTCG CTG CGGC TTTTTACGTTACCAC TERM 38 13386 - 13444 + T 76 -8.5 -3.53761 | opp_overlap 13399, overlap 13388 AGATTGTAAAATTAT TT-GGGTCTAGAATTTTTGGTGTTGGAAA GTA TTTCCATT-CCAAAAGTACTAGGCCCTAA TTTAAAAAGCCATTG TERM 39 13388 - 13441 + T 100 -12.7 -2.90496 | gap 1, opp_overlap 13399, overlap 13386 ATTGTAAAATTATTT GGGTCTAGAATTTTTGGTGTTGGAAA GTA TTTCCATT-CCAAAAGTACTAGGCCC TAATTTAAAAAGCCA TERM 40 13503 - 13474 - T 88 -9.3 -4.32049 | overlap 13475 GATAATGGATCAAAA GTGACCACTAGGG TACA CCCTAATGGCCAT TAAAAATAAGCAAAT TERM 41 13502 - 13475 - T 100 -12.8 -3.18506 | overlap 13474 ATAATGGATCAAAAG TGACCACTAGGG TACA CCCTAATGGCCA TTAAAAATAAGCAAA pSF118-20_18 14090 - 13518 - | hypothetical protein TERM 42 14241 - 14257 + r 86 -10.1 -3.68244 | AAAGGAGTAGCCTAA GTGTCCG TTG CGGACGC TTTACAATTAATGCT TERM 43 14418 - 14465 + r 86 -9.4 -4.08485 | gap 1, overlap 14419 TGAATAAATATTTTT TTAGGCAATCAAACTTTGC-TCG TAT TGAAGTGGAGTTTGGTTGCCTAG TTTCGTTTGAATCCG TERM 44 14419 - 14464 + r 83 -10.7 -3.04609 | gap 1, overlap 14418 GAATAAATATTTTTT TAGGCAATCAAACTTTGC-TCG TAT TGAAGTGGAGTTTGGTTGCCTA GTTTCGTTTGAATCC pSF118-20_19 15797 - 14418 - | putative transposase TERM 45 14595 - 14585 - G 74 -5.4 -4.7373 | TTAGCTTACTAAAAA CTGT TTC ACAG GCAGCGTTATCTAGA TERM 46 15834 - 15803 - H 100 -13.2 -3.8211 | gap 1 TTTTAGTCATAATAA TACCCCCA-AGTTGA TTT CCAACTCTGGGGGTA CACGTCAAGCTCTGG TERM 47 15909 - 15934 + H 100 -9.7 -5.04597 | TAACGGCTCTACATG GGAAGTCCTGT TCTA GCGGGGCTTCC TTTTTCTGTCTACAT pSF118-20_20 16058 - 16318 + | putative UV-resistance-like protein pSF118-20_21 16455 - 16766 + | hypothetical protein pSF118-20_22 16759 - 17211 + | hypothetical protein TERM 48 17272 - 17238 - f 91 -11.7 -3.50393 | opp_overlap 17238 GTTCACGTGATATAA CACTGTTAGTAAC AGGGCTGAA GTTACTAACAGTG TTATATCAAAAGGCC TERM 49 17238 - 17272 + F 91 -11.7 -3.48276 | opp_overlap 17238 GTTCACGTGATATAA CACTGTTAGTAAC AGGGCTGAA GTTACTAACAGTG TTATATCAAAAGGCC TERM 50 17588 - 17553 - g 86 -2.7 -5.80003 | gap 2 GGAACAAATAAAAAA GCCGCCCTGCGTAAC TTTGGTCG GTTAC--AGGGCGAC AATATAGTTTTGTAA pSF118-20_23 17419 - 17595 + | hypothetical protein TERM 51 17636 - 17662 + T 100 -11.6 -5.04597 | overlap 17626 17634 GAAGCGGCTTGCACG GGAAGTCCTGTT TTC GGCGGGACTTCC TTTTTCTGTCTACAT pSF118-20_24 18090 - 17833 - | hypothetical protein pSF118-20_25 18177 - 18440 + | putative PemI-like protein pSF118-20_26 18434 - 18778 + | putative PemK-like protein TERM 52 18813 - 18781 - f 73 -4.3 -5.02323 | TGATGACAAATAAAA GAGTTATTTCTTTGA TAT TAAAACAAATAACCC CTAATATTGATGTGT TERM 53 18912 - 18880 - f 77 -9.2 -3.22388 | opp_overlap 18880 TATTTAAGCTACCAA GGTATGATTTCGGT ATTCA ACCGGAGTCATACC TTTTGTTTTTAAGGA TERM 54 18880 - 18912 + F 100 -13.6 -5.26119 | opp_overlap 18880 TATTTAAGCTACCAA GGTATGATTTCGGT ATTCA ACCGGAGTCATACC TTTTGTTTTTAAGGA pSF118-20_27 19002 - 20222 + | putative transposase SEQUENCE gi|56707135|ref|NC_006530.1| Lactobacillus salivarius UCC118 plasmid pSF118-44, complete sequence (length 44013) LSL_1988 1725 - 1021 - | MutT/Nudix-like protein LSL_1989 2256 - 1948 - | TetR family transcriptional regulator TERM 1 2111 - 2084 - G 71 -8.6 -3.14564 | opp_overlap 2085 2089 2092, overlap 2089 2092 TGAGCTGGCCAGTAA GTAAAGAAGTCA TCGA TGACTTCTTTAT AGGTTTGGGGGTTAA TERM 2 2085 - 2110 + g 84 -12.1 -2.65279 | opp_overlap 2084 2089 2092, overlap 2089 2092 GAGCTGGCCAGTAAG TAAAGAAGTCA TCGA TGACTTCTTTA TAGGTTTGGGGGTTA TERM 3 2089 - 2106 + g 82 -8.5 -4.02132 | opp_overlap 2089 2084 2092, overlap 2085 2092 TGGCCAGTAAGTAAA GAAGTCA TCGA TGACTTC TTTATAGGTTTGGGG TERM 4 2106 - 2089 - G 82 -8.5 -3.95584 | opp_overlap 2085 2089 2092, overlap 2084 2092 TGGCCAGTAAGTAAA GAAGTCA TCGA TGACTTC TTTATAGGTTTGGGG TERM 5 2590 - 2561 - H 72 -8.7 -3.17571 | gap 1, opp_overlap 2561 2560, overlap 2570 AATTTTTCAACGCAA CTGTTCA-AACGCT ATC AGCGTAGTGAACAG GCTTTTGATTTAGCA LSL_1991 3226 - 4143 + | hypothetical protein LSL_1992 4156 - 4659 + | hypothetical protein TERM 6 5072 - 5043 - f 72 -8.7 -3.17571 | gap 1, opp_overlap 5042 5043, overlap 5052 AATTTTTCAACGCAA CTGTTCA-AACGCT ATC AGCGTAGTGAACAG GCTTTTGATTTAGCA TERM 7 5699 - 5709 + F 77 -4.6 -5.25976 | GTTAAACATATTCTA CCCG GTA TGGG TTTATTTTTTTACTT TERM 8 5808 - 5764 - f 100 -9.5 -4.9792 | opp_overlap 5775 5777 CACCCCATAGAAAAA GCGCCTCACAATGGTTAGA ACTTTTG TCTAACTATTATGAGACAC TAGTAGTAGAAGCAA LSL_1994 5876 - 6175 + | antitoxin of toxin-antitoxin stability system LSL_1995 6172 - 6507 + | toxin of toxin-antitoxin stability system TERM 9 6509 - 6553 + T 100 -11 -4.88228 | opp_overlap 6511, overlap 6511 ACAAGAAGCGATAGA AACTAGCAAGATAATCTC CCAAGTTCA GGGATTATCTTGCTAGTC TTTTTGATATTCAAT TERM 10 6551 - 6511 - T 100 -13.6 -4.10781 | gap 1, opp_overlap 6511 6509 AAGAAGCGATAGAAA CTAGCAAGATAATCTCCCA AGTT CAGG-GATTATCTTGCTAG TCTTTTTGATATTCA TERM 11 6511 - 6551 + T 100 -13.6 -4.05583 | opp_overlap 6511, overlap 6509 AAGAAGCGATAGAAA CTAGCAAGATAATCTC CCAAGTTCA GGGATTATCTTGCTAG TCTTTTTGATATTCA LSL_1996 6872 - 6564 - | hypothetical protein LSL_1997 7161 - 6874 - | hypothetical protein TERM 12 7264 - 7228 - H 95 -5.9 -5.77677 | opp_overlap 7236 CAAAACAATAAAAAA CAAGCATTGCATATCAC ATC ATGCTATGATATGCTTG GATTGTAAATAAGGA LSL_1998 7288 - 8073 + | putative plasmid partition protein LSL_1999 8152 - 8355 + | hypothetical protein TERM 13 8769 - 8718 - f 100 -14.1 -3.46051 | gap 1, opp_overlap 8725 8731, overlap 8731 GAATAAAGAGATCAA GCTAAACCAAAAAGTCCCCAATTC ACGAG GAATCAGGGAC-CTTTAGTTTAGC AAGTAGCTACCATCC TERM 14 8757 - 8731 - f 100 -9.5 -5.01042 | opp_overlap 8725 8731, overlap 8718 AAGCTAAACCAAAAA GTCCCCAATTC ACGAG GAATCAGGGAC CTTTAGTTTAGCAAG TERM 15 8794 - 8835 + F 73 -8.1 -3.44936 | overlap 8795 CCATCCAGCTACTTA GGTTCAGACGATTTTTACT TGGC GGTTCAAATCGTCTGAACA TTGCTCTTAATTTGT TERM 16 8795 - 8834 + F 86 -11.6 -2.65877 | overlap 8794 CATCCAGCTACTTAG GTTCAGACGATTTTTACT TGGC GGTTCAAATCGTCTGAAC ATTGCTCTTAATTTG TERM 17 8929 - 8962 + F 100 -13.4 -5.64873 | opp_overlap 8924 8929 ACAAATTAAAGTCAA TGGACTAAGTAGCT AACTGG AGCTATTTAGTCCA TTTTTTGTTGTTAGA TERM 18 8962 - 8929 - f 85 -11.2 -3.36188 | opp_overlap 8929, overlap 8924 ACAAATTAAAGTCAA TGGACTAAGTAGCT AACTGG AGCTATTTAGTCCA TTTTTTGTTGTTAGA TERM 19 9004 - 8988 - f 100 -8 -5.42514 | TTAGAAATTAAAAAA GTTGCC GAATG GGCAAC CAAAAATAGACACAT TERM 20 9630 - 9604 - g 100 -16 -3.49668 | overlap 9592 9611 AAACCCTTGATACAA GCGGAAATGTGA AAA TCACACTTCCGC AGGAGACCGCTCAAA TERM 21 9684 - 9658 - g 100 -16 -3.49668 | overlap 9646 9637 9665 AAACCCTTGATACAA GCGGAAATGTGA AAA TCACACTTCCGC ATAAGTCCGCTGATG repA 9165 - 10259 + | plasmid replication initiation protein LSL_2001 10429 - 10626 + | hypothetical protein LSL_2002 10677 - 11423 + | hypothetical protein TERM 22 11564 - 11538 - T 100 -10.9 -5.45802 | opp_overlap 11538 TCCTGAAAACAAAAA CGATCGGCCTA GTTAT TAGGCTGATCG TTTTTGAATTTGTTC TERM 23 11538 - 11564 + T 100 -13.8 -4.86939 | opp_overlap 11538 TCCTGAAAACAAAAA CGATCGGCCTAG TTA TTAGGCTGATCG TTTTTGAATTTGTTC LSL_2003 11824 - 11546 - | hypothetical protein LSL_2004 12056 - 11847 - | hypothetical protein TERM 24 11991 - 12014 + g 76 -6.8 -4.5852 | AATCTTATTTTTTTC GTCCTTAATT TTTT GATTAAGGGC TTTTAATTTAGCTTC TERM 25 12282 - 12268 - H 90 -11.4 -3.40899 | AATCCTGTATTAGAA GTCGCC GAT GGCGAC AACAAAGTTAAGCCC TERM 26 12962 - 12946 - g 86 -5.1 -5.67063 | opp_overlap 12949, overlap 12949 CTTAGCACAAAAAAA TATTCCG GAT CGGATTA GTGAAAAATCGTTTG LSL_2005 12326 - 14386 + | nickase TERM 27 14689 - 14663 - f 100 -11.6 -5.20783 | overlap 14680 14683 ATGTAAACAGAAAAA GGAAGTCCCGCC GAA AACAGGACTTCC CGTGCAAGCCGCTTC LSL_2006 14823 - 15002 + | hypothetical protein LSL_2007 15330 - 15124 - | cinnamoyl ester hydrolase-like protein TERM 28 16439 - 16429 - g 74 -5.4 -4.72188 | TTAACTCAAAAGAAA GCAA TTT TTGC TTGGGAATGGATGTA LSL_2008 15640 - 16662 + | quinone oxidoreductase TERM 29 17027 - 17015 - g 72 -2.7 -5.28176 | CCGATGTACAAAAAA TAACC CAC GATTA TCTAAATTTATTAAA LSL_2009 16666 - 17346 + | hypothetical protein TERM 30 17396 - 17344 - T 73 -8 -3.42124 | opp_overlap 17344 17355, overlap 17372 CAAAACCACGTACAA TAGCCTTAAAAGTTGTCACTTT AAGAAATAA AAAGTGATGACTTTTGAGGCTA TTGTACGCTTGATTC TERM 31 17344 - 17396 + T 100 -14.6 -3.38178 | opp_overlap 17344 17372, overlap 17355 CAAAACCACGTACAA TAGCCTTAAAAGTTGTCACTTT AAGAAATAA AAAGTGATGACTTTTGAGGCTA TTGTACGCTTGATTC LSL_2010 17679 - 17359 - | putative transposase TERM 32 17729 - 17742 + H 79 -6.7 -4.66609 | GATTTCAATCATACG GGGAA GGCT TTCCC TTTTTCAATACCCTC TERM 33 18209 - 18178 - g 73 -3.8 -5.04385 | GATATGGTCAAAAAA CGGTAGTTAAAAAT CTGA ATCTTGAAATACCG GCTCAATCGTTAGTT LSL_2011 18132 - 18998 + | ABC transporter ATP-binding subunit TERM 34 19458 - 19475 + G 89 -8.5 -4.29472 | AATTTTAGCATCATT TTCAGCA AGTG TGCTGAA TTTCATTTTAGTTTA TERM 35 19774 - 19759 - g 74 -6.2 -4.56093 | opp_overlap 19759, overlap 19754 AATCTAACCACAAAA TTGCAA AACT TTGCAA TAGTTACCGGTGTAA LSL_2012 19000 - 19860 + | membrane permease LSL_2013 19866 - 20318 + | putative transcriptional regulator LSL_2014 20332 - 20736 + | hypothetical protein TERM 36 21307 - 21285 - f 73 -7.7 -3.68827 | opp_overlap 21285 21279 21278 CACTTAGCACTGAAA GCCGCCA GTCGTTCTT TGGCGGC TTGTAGGTTCTCTGC TERM 37 21285 - 21307 + F 73 -8.4 -3.46511 | opp_overlap 21285, overlap 21279 21278 CACTTAGCACTGAAA GCCGCCAG TCGTTCT TTGGCGGC TTGTAGGTTCTCTGC TERM 38 22222 - 22235 + F 79 -6.7 -4.66609 | GATTTCAATCATACG GGGAA GGCT TTCCC TTTTTCAATACCCTC LSL_2017 22472 - 22597 + | hypothetical protein TERM 39 22622 - 22650 + T 70 -3.8 -5.11836 | AGTAAAAGTCTTAGT GTCATGCTTTTC TTATT GATTAGCATGGC TTTTCTTTTGCCTAT TERM 40 22668 - 22711 + T 100 -13.3 -3.05159 | opp_overlap 22675, overlap 22674 22675 TTCTTTTGCCTATTC TCAAAAAGCCCGCTACCTT CCTAAT GAGGTAACGGGCCTTTTGA TATAATTTCCTATCC TERM 41 22674 - 22705 + T 74 -6.5 -4.40894 | opp_overlap 22675, overlap 22668 22675 TGCCTATTCTCAAAA AGCCCGCTACCTT CCTAAT GAGGTAACGGGCC TTTTGATATAATTTC TERM 42 22675 - 22704 + T 82 -10 -3.23452 | opp_overlap 22675, overlap 22674 22668 GCCTATTCTCAAAAA GCCCGCTACCTT CCTAAT GAGGTAACGGGC CTTTTGATATAATTT TERM 43 22704 - 22675 - T 100 -11.5 -4.59773 | opp_overlap 22675 22674 22668 GCCTATTCTCAAAAA GCCCGCTACCT TCCTAATG AGGTAACGGGC CTTTTGATATAATTT LSL_2018 23173 - 22721 - | hypothetical protein LSL_2019 23393 - 23166 - | hypothetical protein LSL_2020 23923 - 25272 + | pyridine nucleotide-disulphide oxidoreductase family protein TERM 44 25331 - 25294 - f 100 -15.1 -4.63526 | opp_overlap 25294 25297 AGAAGCATAAAGAAA GAACCGTTTGGAATTTC AAAT GAAACTCTAAACGGTTC TTCTTCTTAGGAGGC TERM 45 25294 - 25331 + F 100 -15.1 -3.9461 | opp_overlap 25294, overlap 25297 AGAAGCATAAAGAAA GAACCGTTTGGAATTTC AAAT GAAACTCTAAACGGTTC TTCTTCTTAGGAGGC TERM 46 25297 - 25328 + F 93 -11 -4.09963 | opp_overlap 25294, overlap 25294 AGCATAAAGAAAGAA CCGTTTGGAATTTC AAAT GAAACTCTAAACGG TTCTTCTTCTTAGGA TERM 47 28897 - 28915 + G 77 -6.1 -4.66535 | CATTCCGGTTTGGAT TTCATCA TTTAC TGATGAA TTTATTTTGGACATT TERM 48 28987 - 28999 + G 82 -7.7 -4.58663 | TCGGCAACTGCCACA GCGAA TGA TTCGC TTTTTCAGGGATGAT LSL_2021 28418 - 29020 + | putative membrane associated transport subunit LSL_2022 29020 - 29814 + | transport protein CbiQ LSL_2023 29787 - 30344 + | cobalt transport protein CbiQ TERM 49 30391 - 30361 - f 76 -3.4 -5.41143 | gap 1, overlap 30363 30386 CAGTGTTGAAAAAAA GACGATCTTCATT GTGTCA AATGAAG-TCGAC GATCTCTGTGAAATT TERM 50 31011 - 31031 + G 73 -8.4 -3.70919 | opp_overlap 31010 GAAAATCCATATGAC CTTTCGTT ATCTG AACGAAAG TTATTAACGTTTGCA LSL_2024 30603 - 31418 + | cobalt transport ATP-binding protein CbiO TERM 51 31604 - 31568 - f 82 -7.5 -4.46669 | gap 1, opp_overlap 31574 31601, overlap 31574 ATTAAAAGTAATAAA CATTAAGGATTGGTCA TTGTGG TGACCAATCCTTT-TG CATATAATGAAAATA TERM 52 31599 - 31574 - f 91 -12 -3.54984 | opp_overlap 31574, overlap 31568 AGTAATAAACATTAA GGATTGGTCA TTGTGG TGACCAATCC TTTTGCATATAATGA TERM 53 31574 - 31599 + F 100 -12.7 -4.24948 | opp_overlap 31574 31568 AGTAATAAACATTAA GGATTGGTCAT TGTG GTGACCAATCC TTTTGCATATAATGA LSL_2025 31791 - 31949 + | hypothetical protein LSL_2026 32695 - 34281 + | glycine betaine transporter LSL_2027 34281 - 35252 + | glycine betaine transporter TERM 54 35532 - 35502 - g 74 -2.4 -5.44119 | overlap 35503 35504 GTGACCCGAAAAAAA TCTTGTTGAGCGCC GTT GAAGCCCAACAGGC AGCCCAACATCTCCA TERM 55 36064 - 36047 - g 74 -9.1 -3.09933 | overlap 36049 CTCCAAGCCATCGAA CAGACCG ACGA CGGCCTG CAATTGACGGCACCT LSL_2028 35348 - 36679 + | glutathione reductase TERM 56 37001 - 36975 - f 71 -8 -3.33492 | overlap 36989 TTAGCTACGCCAGAA CGCCAAGCGG AAATGCG CCGCTTAACG CTCTAGCTAAGCTAA LSL_2029 37363 - 37947 + | resolvase TERM 57 38059 - 38104 + TF 100 -17.1 -4.76041 | opp_overlap 38061, overlap 38060 38061 38063 TGGCCCCTAAATCTA AAGAGAGCGTGTATTGAAATC CAAG GATTTCGATACACGCTCTCGC TTTTTACTACGTCTC TERM 58 38060 - 38103 + TF 100 -20.6 -3.44902 | opp_overlap 38061, overlap 38059 38061 38063 GGCCCCTAAATCTAA AGAGAGCGTGTATTGAAATC CAAG GATTTCGATACACGCTCTCG CTTTTTACTACGTCT TERM 59 38102 - 38061 - Tf 100 -21.9 -3.84451 | opp_overlap 38060 38059 38061 38063 GCCCCTAAATCTAAA GAGAGCGTGTATTGAAATC CAAG GATTTCGATACACGCTCTC GCTTTTTACTACGTC TERM 60 38061 - 38102 + TF 100 -24.1 -2.66218 | opp_overlap 38061, overlap 38060 38059 38063 GCCCCTAAATCTAAA GAGAGCGTGTATTGAAATC CAAG GATTTCGATACACGCTCTC GCTTTTTACTACGTC TERM 61 38063 - 38100 + TF 100 -20.9 -2.86601 | opp_overlap 38061, overlap 38061 38060 38059 CCCTAAATCTAAAGA GAGCGTGTATTGAAATC CAAG GATTTCGATACACGCTC TCGCTTTTTACTACG TERM 62 38258 - 38268 + GT 71 -6.8 -4.08689 | opp_overlap 38257 AGGGGCGAAAATCAT GGAG GCC CTCC TTTCATTCTTGCGTA LSL_2031 39107 - 38271 - | hypothetical protein LSL_2030 38072 - 38395 + | hypothetical protein LSL_2032 39392 - 39222 - | DinJ damage inducible protein-like protein LSL_2033 39582 - 39869 + | hypothetical protein TERM 63 40382 - 40338 - T 100 -24.7 -5.04175 | opp_overlap 40338 CTAACCATAGAAAAA GCACCTCACAATGGTTAGA TAAAAGT TCTAACCATTGTGAGGTGC TTTTTCTAGAATCTT TERM 64 40338 - 40382 + T 100 -24.7 -4.87273 | opp_overlap 40338 CTAACCATAGAAAAA GCACCTCACAATGGTTAGA TAAAAGT TCTAACCATTGTGAGGTGC TTTTTCTAGAATCTT LSL_2034 41274 - 40441 - | hypothetical protein TERM 65 40468 - 40503 + g 78 -7.6 -4.15029 | gap 1 TGGTGGGTAAACCCG TGGATGTTTCGCCGCTG CAT CAGCTGTGAACCA-CCA TTCTTTATCTGGGAT LSL_2035 41566 - 41276 - | hypothetical protein LSL_2036 41816 - 41568 - | hypothetical protein LSL_2037 42714 - 41977 - | hypothetical protein TERM 66 42318 - 42307 - G 85 -4.4 -5.59564 | ACAAAGTGAAAAAAA TGTC GTCA GACA CCAAACTAATCCGAT SEQUENCE gi|90960990|ref|NC_007929.1| Lactobacillus salivarius UCC118, complete genome (length 1827111) TERM 1 317 - 301 - g 84 -3.7 -5.59357 | overlap 290 302 ACTACACCAAAAAAA GTTTCTG TTG CAGAAAA TAATAATAGTTCTTC TERM 2 316 - 302 - g 73 -7.2 -3.93988 | overlap 290 301 CTACACCAAAAAAAG TTTCTG TTG CAGAAA ATAATAATAGTTCTT dnaA 1 - 1365 + | chromosomal replication initiation protein dnaN 1532 - 2671 + | DNA polymerase III, beta chain TERM 3 2698 - 2678 - f 79 -2.7 -5.79526 | opp_overlap 2680, overlap 2680 2694 ACATTCTAAAAAAAA GATAAATTA GAT TAATTTATT AAATAAGACTCTTAT TERM 4 2702 - 2737 + F 82 -6.4 -4.96848 | gap 1, opp_overlap 2694 2702 GATTAATTTATTAAA TAAGACTC-TTATGCTT TTT ATGTATAAAGAGTCTTA TTTTTATATAAAAAA LSL_0003 3088 - 3309 + | hypothetical protein recF 3309 - 4448 + | recombination protein F TERM 5 4754 - 4743 - g 83 -5.8 -5.11836 | ATATTCAAAAGAAAA CAGG TCGT CCTG CATTAGAAACAGTTT gyrB 4451 - 6409 + | DNA gyrase subunit B TERM 6 6461 - 6446 - g 77 -6.2 -4.69053 | TAGGAGGTAAGAAAA TTGGTA GATT TACCAA ATAGAATTAAAGACG TERM 7 7223 - 7211 - g 74 -6.3 -4.29845 | CAAGCTAATGGAAAA CAACA AAT TGTTG TACATGAGTTGCCAT gyrA 6446 - 8998 + | DNA gyrase subunit A TERM 8 9029 - 9009 - f 82 -9.8 -3.63707 | opp_overlap 9009 9028 AATAGAATTTTTAAA GATTGGGA AAATA TCCCAATC TTTTTTTTGAAAAGA TERM 9 9009 - 9029 + F 100 -9.8 -5.75342 | opp_overlap 9009, overlap 9028 AATAGAATTTTTAAA GATTGGGA AAATA TCCCAATC TTTTTTTTGAAAAGA TERM 10 9028 - 9044 + F 81 -4.5 -5.48213 | opp_overlap 9009, overlap 9009 GGGAAAATATCCCAA TCTTTTT TTT GAAAAGA TTTTTATTTTACGTA rpsF 9217 - 9507 + | 30S ribosomal protein S6 ssb 9548 - 10099 + | single-strand DNA binding protein rpsR 10121 - 10357 + | 30S ribosomal protein S18 TERM 11 10409 - 10368 - T 100 -9.7 -4.75308 | opp_overlap 10372, overlap 10372 ATTAATAGTTAAAAA GTAAGACACCTAACAATAT TTAT ATATTGTTAAGTGTCTTTT TTAGTTTTTTAATCG TERM 12 10372 - 10405 + T 100 -12.7 -5.59502 | opp_overlap 10368 10372 ATAGTTAAAAAGTAA GACACCTAACAATAT TTAT ATATTGTTAAGTGTC TTTTTTAGTTTTTTA TERM 13 10405 - 10372 - T 100 -14.9 -3.83644 | opp_overlap 10372, overlap 10368 ATAGTTAAAAAGTAA GACACCTAACAATAT TTAT ATATTGTTAAGTGTC TTTTTTAGTTTTTTA mmsB 11281 - 10418 - | 3-hydroxyisobutyrate dehydrogenase rfaG 11427 - 12440 + | glycosyltransferase TERM 14 13463 - 13505 + F 87 -5.3 -5.5208 | gap 1, opp_overlap 13463 ATAAGAAGATTGAAA TATCCTTTTAATTATTAG ACAAATTA CTAATAATTAA-GGGATA TTTTTTATATTCTAA TERM 15 13663 - 13642 - f 71 -6.7 -4.09455 | gap 1, overlap 13646 ATTAATATGAAATAA GTCACTAGAA TTG TTCTAG-GAC AAATTATAGAAGGTA asnB 13691 - 15613 + | asparagine synthetase TERM 16 15628 - 15653 + F 100 -12.7 -5.11063 | opp_overlap 15626 AAATATAAGATATTG TAGTCGTGAGA GAGT TCTCACGGCTA TTTTTGTTGACTGAT TERM 17 16679 - 16704 + G 73 -4.1 -4.94147 | GGTAGTTTCTTAAAT GCGGTAATTAA CTTC TTGATTATTGC TTTTGTTGTATTCTT mscL 16466 - 16843 + | large-conductance mechanosensitive channel TERM 18 16905 - 16854 - T 95 -12.1 -3.73725 | gap 1, opp_overlap 16863, overlap 16863 AATAATAAGTTTAAA TAAAAGAAATCCTATGGAATTGGA ATTAA CCCAATTTCATAGGATTT-TTTTA GTACTCGGAAGCTCC TERM 19 16897 - 16863 - T 100 -10.9 -4.96996 | opp_overlap 16863, overlap 16854 TTTAAATAAAAGAAA TCCTATGGAATTGGA ATTAA CCCAATTTCATAGGA TTTTTTTAGTACTCG TERM 20 16863 - 16897 + T 100 -12.4 -5.55664 | opp_overlap 16863 16854 TTTAAATAAAAGAAA TCCTATGGAATTGG AATTAAC CCAATTTCATAGGA TTTTTTTAGTACTCG LSL_0014 18789 - 16903 - | pyruvate oxidase TERM 21 18945 - 18961 + H 76 -3.7 -5.47159 | opp_overlap 18945 18940, overlap 18948 GGAAAATAGACAAAA TTTCACT ATA AGTGTAA TTTTTTATGTTAGAA LSL_0015 19313 - 19639 + | hypothetical protein TERM 22 19674 - 19637 - f 73 -4.3 -5.02074 | opp_overlap 19643, overlap 19642 19643 GGAGCTTCTAAAAAA TAAAAGGATTAGTTTGA GAGA TCAAGCTAATCTTTTTT AATATTATATATTGT TERM 23 19669 - 19642 - f 77 -4.2 -5.42198 | opp_overlap 19643, overlap 19637 19643 TTCTAAAAAATAAAA GGATTAGTTTGA GAGA TCAAGCTAATCT TTTTTAATATTATAT TERM 24 19643 - 19668 + F 100 -9.9 -5.30189 | opp_overlap 19642 19637 19643 TCTAAAAAATAAAAG GATTAGTTTGA GAGA TCAAGCTAATC TTTTTTAATATTATA TERM 25 19668 - 19643 - f 74 -7.7 -3.83692 | opp_overlap 19643, overlap 19642 19637 TCTAAAAAATAAAAG GATTAGTTTGA GAGA TCAAGCTAATC TTTTTTAATATTATA TERM 26 19846 - 19827 - g 71 -8.6 -3.14602 | overlap 19825 TTTATTGGATGAACA CCACCTCT TAAA AGAAGTGG TTAACGAACAAAAAT murE 19783 - 21315 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 27 21370 - 21382 + G 73 -4.1 -4.8667 | ATTTTAATGTTTACG GAATG GCA CGTTC TTTTTATGAAATATA LSL_0017 21315 - 22565 + | hypothetical protein racX 22575 - 23288 + | aspartate racemase TERM 28 23329 - 23282 - T 89 -8.8 -4.5478 | gap 1, opp_overlap 23286 23290 23296, overlap 23289 23296 AAAAACACAAAAGAA TAAATAGCAAAAAACCAGTGG GCAACAA CCACTGG-TTTTTGTTATCTA TTAAATTTCAAACGT TERM 29 23286 - 23325 + T 76 -9.6 -3.16217 | gap 1, opp_overlap 23282 23289 23296, overlap 23290 23296 ACACAAAAGAATAAA TAGCAAAAAACCAGTGG GCAACAA CCACTGG-TTTTTGTTA TCTATTAAATTTCAA TERM 30 23322 - 23289 - T 73 -9.1 -2.94745 | gap 1, opp_overlap 23286 23290 23296, overlap 23282 23296 CAAAAGAATAAATAG CAAAAAACCAGTGG GCAACAA CCACTGG-TTTTTG TTATCTATTAAATTT TERM 31 23290 - 23322 + T 80 -9.3 -3.71156 | opp_overlap 23289 23282 23296, overlap 23286 23296 AAAAGAATAAATAGC AAAAAACCAGTGG GCAACAA CCACTGGTTTTTG TTATCTATTAAATTT TERM 32 23316 - 23296 - T 100 -8.3 -5.34055 | opp_overlap 23296 23290 23286, overlap 23289 23282 ATAAATAGCAAAAAA CCAGTGG GCAACAA CCACTGG TTTTTGTTATCTATT TERM 33 23296 - 23316 + T 93 -8.3 -5.28561 | opp_overlap 23289 23282 23296, overlap 23290 23286 ATAAATAGCAAAAAA CCAGTGG GCAACAA CCACTGG TTTTTGTTATCTATT LSL_0019 24546 - 23323 - | multidrug resistance efflux pump TERM 34 25131 - 25107 - g 73 -7.1 -4.0162 | opp_overlap 25106 25107 25111, overlap 25092 TGTTGATATTATAAA CAGAGCACGAT TAT ATCGAGCTGTG ATATTTGGGTATGCT LSL_0020 24679 - 25245 + | TetR family transcriptional regulator LSL_0021 25365 - 26231 + | glucose uptake protein TERM 35 26251 - 26241 - f 79 -2.6 -5.80951 | ATCTAAAATAAAAAA TTAA TAA TTAA AAACAAGAGATGTCC TERM 36 26262 - 26304 + F 100 -10.8 -5.53288 | overlap 26264 ATTAAAAACAAGAGA TGTCCCATAGTTATTGGCTA ATT TAGTTGATGACTATGGGATG TTTTTTTAAGTTCCG TERM 37 26264 - 26302 + F 100 -13.4 -4.40173 | overlap 26262 TAAAAACAAGAGATG TCCCATAGTTATTGGCTA ATT TAGTTGATGACTATGGGA TGTTTTTTTAAGTTC TERM 38 26812 - 26798 - g 75 -8.6 -3.37487 | overlap 26796 GTACAGGTGTAAATA CTGACA AAT TGTCAG AAATGGAACAGTTTG LSL_0022 26461 - 27807 + | hypothetical protein LSL_0023 27822 - 28382 + | hypothetical protein TERM 39 28412 - 28390 - f 75 -4.8 -5.00339 | opp_overlap 28391, overlap 28391 ATGAATAATTAAAAA GCTGGTAGAA AAT TTCTGCCAGT TTTTTATTCCCCAAA TERM 40 28411 - 28391 - f 75 -8.3 -3.58577 | opp_overlap 28391, overlap 28390 TGAATAATTAAAAAG CTGGTAGAA AAT TTCTGCCAG TTTTTTATTCCCCAA TERM 41 28391 - 28411 + F 100 -10.5 -5.4505 | opp_overlap 28391 28390 TGAATAATTAAAAAG CTGGTAGAA AAT TTCTGCCAG TTTTTTATTCCCCAA LSL_0024 28581 - 29495 + | drug/metabolite exporter family protein TERM 42 29535 - 29590 + T 77 -10.2 -2.75826 | opp_overlap 29535 29539, overlap 29539 AATTTGAACATAGGA CCAATTTTTGAATTTCTGCAAA AATAAGCTAAAA TTTGCAGAAATTAGAAAATTGG TCCTATCTTAAAATC TERM 43 29660 - 29620 - T 93 -6.5 -5.61881 | gap 1, opp_overlap 29621 29624, overlap 29624 CGCCAAAAATAAAAA TAAAGTCTTGAATTTATC AACGAG GATAAGTTCAAGAC-TTA TTTTTATCTATTCAA TERM 44 29621 - 29660 + T 100 -10.3 -5.10064 | opp_overlap 29620 29624, overlap 29624 GCCAAAAATAAAAAT AAAGTCTTGAATTTATC AACGAG GATAAGTTCAAGACTTA TTTTTATCTATTCAA TERM 45 29624 - 29657 + T 100 -12 -4.62708 | opp_overlap 29620 29624, overlap 29621 AAAAATAAAAATAAA GTCTTGAATTTATC AACGAG GATAAGTTCAAGAC TTATTTTTATCTATT TERM 46 29657 - 29624 - T 100 -9.8 -5.21459 | opp_overlap 29624 29621, overlap 29620 AAAAATAAAAATAAA GTCTTGAATTTATC AACGAG GATAAGTTCAAGAC TTATTTTTATCTATT LSL_0025 31466 - 29664 - | oligoendopeptidase F TERM 47 31381 - 31391 + g 82 -5.4 -5.38047 | ACTGCTACCATATCT GCTT TCC AAGC TTTTTTATCTGGATA TERM 48 31617 - 31648 + H 77 -8.2 -3.7941 | opp_overlap 31616 31617 AGGAACACCAAAATG CGTGAATTTAATTC AGTT GAATTAAATACATG TTGTTGTGAAGCGTG TERM 49 31653 - 31679 + H 86 -7.3 -4.8048 | overlap 31654 TTAAATACATGTTGT TGTGAAGCGTG TCAAT TGCGCTTCACG TTTTTGGTGTGCCAA TERM 50 31654 - 31678 + H 76 -8.6 -3.47806 | overlap 31653 TAAATACATGTTGTT GTGAAGCGTG TCAAT TGCGCTTCAC GTTTTTGGTGTGCCA TERM 51 31753 - 31783 + H 100 -9.1 -5.8187 | CGTAGAATCGTAATT GACACTAATCCAG TAAAT TTGGGTTGGTGTC TTTTTTTATTAACTA cysK 31822 - 32739 + | cysteine synthase metC 32755 - 33897 + | cystathionine beta-lyase / cystathionine gamma-lyase TERM 52 33926 - 33959 + F 77 -3.9 -5.33848 | opp_overlap 33928 33931, overlap 33928 ATAGTAACGACAGAA AACATCTAAGTGTTG AAAG TATCACTTAGGTGTC TTTTTTAATTCTAAT TERM 53 33928 - 33957 + F 70 -6.5 -4.29187 | opp_overlap 33928 33931, overlap 33926 AGTAACGACAGAAAA CATCTAAGTGTTG AAAG TATCACTTAGGTG TCTTTTTTAATTCTA TERM 54 34887 - 34877 - g 71 -5.4 -4.64346 | AAAAAGGAAAAAGAA CCAT TGC ATGG ACAAGTTGTTTCCTT gldA 34052 - 35143 + | glycerol dehydrogenase TERM 55 35194 - 35206 + F 70 -6.3 -4.33151 | opp_overlap 35184 35205, overlap 35200 ACAAGCAAATTATTT TGTGT CCA ACACA TTTTGAATTATGATG TERM 56 35383 - 35398 + G 74 -5.4 -4.77567 | TTATGTAGATGTTGT TAGTGG AGAA CCGCTA TTTTCTTCTAAAGAT LSL_0029 35246 - 35680 + | methionine sulfoxide reductase B LSL_0030 35796 - 36092 + | DNA-damage-inducible protein J TERM 57 36488 - 36444 - f 76 -9.6 -3.16689 | opp_overlap 36449 36454, overlap 36454 AAAATCTCACCAATA CAACAAAAAAGACATCCAGA GTTTT TCTGAATGTCTTTTCTTTTA ACTATAAATAACAAC TERM 58 36449 - 36483 + F 83 -8 -4.24204 | opp_overlap 36444 36454, overlap 36454 CTCACCAATACAACA AAAAAGACATCCAGAG TTT TTCTGAATGTCTTTTC TTTTAACTATAAATA TERM 59 36478 - 36454 - f 100 -9.4 -5.64304 | opp_overlap 36449 36454, overlap 36444 CAATACAACAAAAAA GACATCCAGA GTTTT TCTGAATGTC TTTTCTTTTAACTAT TERM 60 36454 - 36478 + F 89 -7.9 -5.11836 | opp_overlap 36454 36444, overlap 36449 CAATACAACAAAAAA GACATCCAGAG TTT TTCTGAATGTC TTTTCTTTTAACTAT TERM 61 37108 - 37120 + F 75 -4.9 -5.011 | GTACTTTGACTGTCG TTGAT ATC ATCAA TTTTCTTCTTTAAAT TERM 62 37980 - 37994 + F 80 -5.7 -5.03715 | opp_overlap 37980 37979 ACAAAGTATTAAAAT TCTGC GAAAA GCAGA TTTTTTGACAATAAT LSL_0031 38074 - 38523 + | MarR family transcriptional regulator TERM 63 39419 - 39432 + G 72 -5.9 -4.42062 | overlap 39431 TGTAATGTCTATTTT CGCTC GTGG GGGCG TTTCTTTAAAACGTA LSL_0032 38535 - 40268 + | multidrug ABC transporter permease/ATP-binding protein TERM 64 42025 - 41998 - g 70 -2.2 -5.30616 | gap 1, opp_overlap 41992, overlap 41992 TTATTGAAAGAAAAA GGTTTCTACTATA ATT TATA-TACAAACC AGATGGCATTTGAAT LSL_0033 40261 - 42042 + | multidrug/protein/lipid ABC transporter family ATP-binding and permease TERM 65 42053 - 42078 + F 100 -8.4 -5.63857 | opp_overlap 42051 42053 AATAGAACGAAAAGA TAGGTATGGA CGAGTT TCCATGCCTA TTTTTTTAGATTTTT LSL_0034 42151 - 42966 + | HAD superfamily hydrolase TERM 66 42977 - 42992 + F 75 -2.5 -5.59534 | opp_overlap 42970, overlap 42970 AATAAGCATTAAAAA GCGTT AAATTC GACGC TTTTTTATTATAATT LSL_0035 43139 - 43849 + | two-component response regulator LSL_0036 43878 - 45743 + | two-component sensor kinase yycG LSL_0037 45733 - 47070 + | hypothetical protein LSL_0038 47082 - 47882 + | hypothetical protein TERM 67 47917 - 47891 - f 91 -9.6 -4.43844 | opp_overlap 47891 TGATTAGTGAGAAAA TAGAACTAGGAA AAT TTCTTAGTTCTA TTTTTTTGCACGATT TERM 68 47891 - 47917 + F 100 -11.8 -5.41746 | opp_overlap 47891 TGATTAGTGAGAAAA TAGAACTAGGAA AAT TTCTTAGTTCTA TTTTTTTGCACGATT phnP 48364 - 49167 + | zinc-dependent hydrolase degP 49266 - 50573 + | endopeptidase TERM 69 50587 - 50612 + F 100 -6.3 -5.86976 | AATTAGAAATTTTGG CACATATCT TGTAAGAT AGATATGTG TTTTTTATTTTGTGG TERM 70 50726 - 50712 - f 71 -8.6 -2.85238 | opp_overlap 50709, overlap 50699 50709 ACGAAAACAAAGTTA TCCACA GAC TGTGGA ATAAATGTTAATAAC LSL_0043 50970 - 51449 + | SPOUT methyltransferase superfamily protein TERM 71 51469 - 51484 + F 100 -7.5 -5.64421 | opp_overlap 51469 51468 TTAACTAGAATTAAG GCGGG CTAAAT CCCGC TTTTTTATTTGCAGT LSL_0044 51615 - 52262 + | oxidoreductase LSL_0045 52274 - 52666 + | hypothetical protein LSL_0046 52659 - 53507 + | Short chain dehydrogenase TERM 72 53520 - 53559 + F 100 -9.5 -6.09196 | opp_overlap 53519 53522, overlap 53522 TAATAATATAGAAAT AACTGAGAATTAACGTT TTGAAT AGCGTTGATTCTCAGTA TTTTTTTATTTTAGA TERM 73 53522 - 53557 + F 100 -12.1 -4.67109 | opp_overlap 53522 53519, overlap 53520 ATAATATAGAAATAA CTGAGAATTAACGTT TTGAAT AGCGTTGATTCTCAG TATTTTTTTATTTTA TERM 74 53557 - 53522 - f 80 -7.7 -4.22858 | opp_overlap 53520 53522, overlap 53519 ATAATATAGAAATAA CTGAGAATTAACGTT TTGAAT AGCGTTGATTCTCAG TATTTTTTTATTTTA LSL_0047 53643 - 54395 + | hypothetical protein TERM 75 54405 - 54438 + T 80 -5.4 -5.27477 | opp_overlap 54408, overlap 54408 GTGTAAAGCATACAA AAAGACCCTAGATA CTGCCA TATCTAAGGTCTTA TTTTTTGCTTAAACT TERM 76 54408 - 54435 + T 80 -7.1 -4.72473 | opp_overlap 54408, overlap 54405 TAAAGCATACAAAAA GACCCTAGATA CTGCCA TATCTAAGGTC TTATTTTTTGCTTAA TERM 77 54435 - 54408 - T 100 -10 -5.06585 | opp_overlap 54408 54405 TAAAGCATACAAAAA GACCCTAGATAC TGCC ATATCTAAGGTC TTATTTTTTGCTTAA TERM 78 54721 - 54685 - T 79 -6.8 -4.67692 | gap 1, opp_overlap 54693, overlap 54693 GCAAAAGTAAACAAA TAGTAAAACTCCCCTCA GAAA TGAAGGGAG-TTTATTA ATATATAGGAGATTA TERM 79 54693 - 54714 + T 87 -8.7 -4.31293 | opp_overlap 54685 54693 AAACAAATAGTAAAA CTCCCCTCA GAAA TGAAGGGAG TTTATTAATATATAG TERM 80 54714 - 54693 - T 100 -10.9 -4.56802 | opp_overlap 54693, overlap 54685 AAACAAATAGTAAAA CTCCCCTCA GAAA TGAAGGGAG TTTATTAATATATAG glpT 56122 - 54734 - | glycerol-3-phosphate transporter TERM 81 56275 - 56317 + H 100 -13.6 -5.22312 | opp_overlap 56275 56286, overlap 56278 AGACCTCCTAGTGAA GTTCCTTACAATTGTTAGAC AAA GTCTAGCGATTGTGAGGTGC TTTTTTCGTATGACT TERM 82 56278 - 56314 + H 100 -16.1 -3.43308 | opp_overlap 56275 56286, overlap 56275 CCTCCTAGTGAAGTT CCTTACAATTGTTAGAC AAA GTCTAGCGATTGTGAGG TGCTTTTTTCGTATG LSL_0049 56327 - 56845 + | IS1223 family transposase TERM 83 57067 - 57052 - T 73 -9 -2.87683 | opp_overlap 57054, overlap 57054 AGAGGTTCTTACACA TACGGC TATC GCCGTA TAATGCCACTTCTTG TERM 84 57700 - 57718 + T 100 -14.6 -3.72893 | opp_overlap 57700 AATTTCCAATCATAA CCACCCGT AAA ACGGGTGG TTTGCTCCACGACTA TERM 85 57718 - 57700 - T 100 -14.6 -3.51597 | opp_overlap 57700 AATTTCCAATCATAA CCACCCGT AAA ACGGGTGG TTTGCTCCACGACTA TERM 86 57750 - 57771 + T 93 -10.1 -4.2772 | opp_overlap 57750 57748 AAGCCGTTAAGAATA GCCAGTGTC TCAA GGCGCTGGC TTTCTCTTCGTTCAA LSL_0050 58300 - 57833 - | IS200 family transposase TERM 87 58396 - 58414 + r 100 -14.6 -5.68438 | ATAATACTTCATTTT CCACTCGC ATA GCGAGTGG TTTTTTGTTTCGTAC TERM 88 58504 - 58476 - R 100 -6 -5.92399 | TAATAAAACAAAAAA CATGAGTCCTGT TGATT ACCGAACCCATG TCTTAGCTGCTTAAA TERM 89 58696 - 58668 - R 74 -5.9 -4.6902 | opp_overlap 58668 58670, overlap 58670 CGATAAGCGTAAAAA TAGCCCTAGACTG TGG CGTTCTAGGGCTG TTTACAGTGCGCCCG TERM 90 58668 - 58696 + r 87 -10.3 -3.59979 | opp_overlap 58668 58670, overlap 58670 CGATAAGCGTAAAAA TAGCCCTAGACTG TGG CGTTCTAGGGCTG TTTACAGTGCGCCCG TERM 91 58694 - 58670 - R 79 -8.5 -3.95535 | opp_overlap 58668 58670, overlap 58668 ATAAGCGTAAAAATA GCCCTAGACTG TGG CGTTCTAGGGC TGTTTACAGTGCGCC TERM 92 58670 - 58694 + r 85 -10.7 -3.38046 | opp_overlap 58670 58668, overlap 58668 ATAAGCGTAAAAATA GCCCTAGACTG TGG CGTTCTAGGGC TGTTTACAGTGCGCC TERM 93 59225 - 59213 - R 73 -9.1 -2.80531 | opp_overlap 59212 59211, overlap 59205 59212 TCAAAAGTACACAAG GGTGC GTA GCACC AATTTTGGTGAAAAT TERM 94 59841 - 59806 - R 85 -9 -4.09685 | opp_overlap 59814 GGTTATTCGTCAAAA GTGAGAAAGGAACTCC ACAA GGAGGGCCTTTATCAC CACTATTAGCCAACA LSL_0051 60777 - 60583 - | hypothetical protein TERM 95 60862 - 60893 + G 72 -6 -4.41609 | gap 1, opp_overlap 60854 CTGGAAACACTGATT TAGTGGCAGGAATTA CTG TAAGTTC-GCCACTA TTTATGTTTATGCTA LSL_0052 60786 - 62045 + | Na+ driven multidrug efflux pump TERM 96 62082 - 62053 - T 93 -6.6 -5.38326 | opp_overlap 62053 62077 TTAAGTAAAGAAAAA TGCTAAGAAC TGTGAGGGTG GTTCTTAGCA TTTTTGCTAGATTAA TERM 97 62053 - 62082 + T 93 -8.7 -4.77157 | opp_overlap 62053, overlap 62077 TTAAGTAAAGAAAAA TGCTAAGAACTGT GAGG GTGGTTCTTAGCA TTTTTGCTAGATTAA LSL_0053 63575 - 62094 - | ABC transporter, ATP-binding protein TERM 98 63623 - 63604 - H 90 -5.7 -5.54338 | TAAGTAAAATAAAAA GCCTGTC ACAGTG GACAGAC TCAGGGGTAATAATA LSL_0054 63881 - 64300 + | hypothetical protein ppiB 64386 - 64970 + | peptidyl-prolyl cis-trans isomerase TERM 99 64993 - 65030 + F 100 -6.5 -5.84432 | overlap 64984 TTAGTTTTTAGAGAA TCTCTTAATTGTTAGTT GAAA AGCTAATGATTGAGGGA TTTTTTTATATTGTG TERM 100 65330 - 65342 + G 83 -6.3 -5.00616 | TGCAGGGGGAGCTGA TGTTG ATC CAACA TTTTTTGGAGAGGAA LSL_0056 65121 - 65840 + | glutamine amidotransferase, class I TERM 101 65842 - 65889 + T 100 -11.6 -3.97139 | opp_overlap 65847, overlap 65847 GAGCTAAGTACTAGA AAAAAGCTGTATGAATTGTAAT TAAT ATTACTTTTCATACAGCTTTTG TTATTATTGCACTTC TERM 102 65847 - 65884 + T 100 -11.5 -5.00467 | opp_overlap 65847, overlap 65842 AAGTACTAGAAAAAA GCTGTATGAATTGTAAT TAAT ATTACTTTTCATACAGC TTTTGTTATTATTGC TERM 103 65884 - 65847 - T 100 -11.5 -5.33785 | opp_overlap 65842 65847 AAGTACTAGAAAAAA GCTGTATGAATTGTAAT TAAT ATTACTTTTCATACAGC TTTTGTTATTATTGC gshA 67251 - 65893 - | glutamate--cysteine ligase LSL_0058 67454 - 67684 + | hypothetical protein TERM 104 68831 - 68817 - g 74 -3.5 -5.32396 | AGATGAAAAAGAAAA GCAAC AAGCA GCTGC TGACAAGGAAGATTA clpL 67810 - 69918 + | ATP-dependent Clp protease ATP-binding subunit TERM 105 69957 - 69998 + F 89 -8.8 -4.68424 | opp_overlap 69957 ATATATAGGATTAAA CAGCACTAACTTAACTGT AAGACA GCAGTTTTGTTGGTGCTG TTTTTACATAGATTG LSL_0060 70130 - 70606 + | universal stress protein TERM 106 70619 - 70644 + T 88 -6.9 -5.26875 | opp_overlap 70607 70619 TAATAGAAGTAAAAA CTACTAGATGT TTAG GCACCTAGTAG TTTTTTGATTGGAGA TERM 107 70644 - 70619 - T 91 -8.4 -4.99056 | opp_overlap 70619, overlap 70607 TAATAGAAGTAAAAA CTACTAGATG TTTAGG CACCTAGTAG TTTTTTGATTGGAGA LSL_0061 70843 - 70667 - | hypothetical protein TERM 108 70912 - 70938 + r 76 -3.7 -5.49234 | opp_overlap 70912 AAGATTTCAAAAAAA TGCCGCTACTT ATTAC AAGTAACGACA TTTTTTATTAGCTAT TERM 109 70938 - 70912 - R 100 -8.8 -5.46629 | opp_overlap 70912 AAGATTTCAAAAAAA TGCCGCTACTTA TTA CAAGTAACGACA TTTTTTATTAGCTAT glnP 72403 - 70946 - | glutamine-binding protein / glutamine transport system permease protein TERM 110 72535 - 72510 - R 93 -6.2 -5.53079 | opp_overlap 72510 AAAACATATAAAAAA GCCAGTATGC GAATTG ACATACTGAC TTAATTAAGTTTGAG ilvE 73677 - 72643 - | branched-chain amino acid aminotransferase TERM 111 73754 - 73728 - R 100 -10.9 -5.35815 | TAGAGTAAAGAAAAA CCCACAAAGCT AGTTG AGCATTGTGGG TAAAAAGTATATAGT TERM 112 73893 - 73842 - R 80 -7.6 -4.18197 | gap 1, opp_overlap 73845 AGTCTTCACTCAAAA TTAGCTGAGATATTA-GATGACGCA TCG TGCATCATAATAATAGCTAAGCTAA TTAAAATTATACGGT TERM 113 74433 - 74421 - R 76 -6.3 -4.67692 | overlap 74412 TGAAAACTAAACAAA GTTTC GAT GAAAC AAATGTGCAGGGCTT TERM 114 74699 - 74741 + r 71 -7.9 -3.48689 | gap 1, opp_overlap 74699 AAACAGGTGCTAATA CCGTATATC-TCTAAGGATC GCAT GATCCTTAGATGAAAGATGG TTCTGCTATCGCTTT TERM 115 76059 - 76040 - R 72 -9.2 -2.65808 | opp_overlap 76043 76046, overlap 76037 76052 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 116 76123 - 76147 + r 95 -8.7 -5.00196 | overlap 76125 GGATACTTTGTTTAG TTTTGAGAGGT CAT ATCTCTCAAGA TTTTGTTCTTTGAAA TERM 117 76125 - 76145 + r 72 -9.1 -2.74335 | overlap 76123 ATACTTTGTTTAGTT TTGAGAGGT CAT ATCTCTCAA GATTTTGTTCTTTGA TERM 118 76575 - 76556 - R 82 -9.4 -3.66803 | opp_overlap 76555 76554 CGGGAAGAGCCCAAA CTAAGAAG CTCG CTTCTTAG GGTTGTAGGACTGAA TERM 119 79399 - 79418 + r 100 -8.6 -5.76237 | opp_overlap 79399 GCCGTGCAAATGAGA GCTAGGAA GTAA TTCCTGGC TTTTTTATTTATCTC TERM 120 79468 - 79492 + r 100 -9.3 -5.35354 | opp_overlap 79468 TATGCATAGTAAAAA GTTCCTACCGG TTT TCGATAGGAAC TTTTTTAATTGTCTG TERM 121 79492 - 79468 - R 100 -10.8 -4.81551 | opp_overlap 79468 TATGCATAGTAAAAA GTTCCTACCG GTTTT CGATAGGAAC TTTTTTAATTGTCTG scrR 80489 - 79497 - | sucrose operon repressor TERM 122 79868 - 79884 + g 75 -5.1 -4.96646 | opp_overlap 79868 ATACAGGATGAATAT GTAAGGT TAA ACCTAAC TTTTTAATTGTATCA TERM 123 80154 - 80177 + g 82 -4.6 -5.50774 | opp_overlap 80159 AACTTGATTGGCTAA GAGCATTCTT AAAT AAGAACGTTC TTTTTCTTTATTATA scrB 81998 - 80508 - | sucrose-6-phosphate hydrolase scrA 82401 - 84335 + | PTS system, sucrose-specific IIABC component TERM 124 84351 - 84377 + F 95 -5.9 -5.74684 | opp_overlap 84351 GAATAGATTGTAAAA GTATCTGACTT AATTA GGGTCGGATAC TTTTTATTTTTCTTA amyB 84450 - 86195 + | neopullulanase / cyclomaltodextrinase / maltogenic alpha-amylase TERM 125 86231 - 86203 - f 74 -6.1 -4.4084 | opp_overlap 86203 AAGCATAGAGTAAAA GCATATTTGGAAA TCA TTTCTAAGTATGC TTTTTTAGTAATTCG TERM 126 86203 - 86231 + F 100 -10.5 -5.2189 | opp_overlap 86203 AAGCATAGAGTAAAA GCATATTTGGAAA TCA TTTCTAAGTATGC TTTTTTAGTAATTCG ktrB 86310 - 87698 + | potassium uptake protein ktrB ktrA 87718 - 88356 + | potassium uptake protein LSL_0070 88433 - 89086 + | putative Zn-dependent protease LSL_0071 89113 - 90129 + | N-acetylglucosaminyltransferase TERM 127 90137 - 90175 + T 88 -6.9 -5.29445 | opp_overlap 90139, overlap 90139 GAATATAAAAGTAAA AATTGCTAGAGATCATT ATTAA AACGATCTTTAGCAATC TTTTTATTATTGAGA TERM 128 90139 - 90173 + T 90 -9.5 -4.27297 | opp_overlap 90139, overlap 90137 ATATAAAAGTAAAAA TTGCTAGAGATCATT ATTAA AACGATCTTTAGCAA TCTTTTTATTATTGA TERM 129 90173 - 90139 - T 100 -9.5 -5.15526 | opp_overlap 90137 90139 ATATAAAAGTAAAAA TTGCTAGAGATCATT ATTAA AACGATCTTTAGCAA TCTTTTTATTATTGA LSL_0072 90479 - 90207 - | hypothetical protein TERM 130 91391 - 91369 - g 77 -5.6 -4.96106 | CAGAAACAGGAAAAA CAACTAGCCT TAG AAGCTAATCG AAAACGTAAAGCGCA LSL_0073 90664 - 92457 + | hypothetical protein TERM 131 92464 - 92485 + F 100 -9.5 -5.63236 | opp_overlap 92464 GCATTTTAGGATGAA TCTCAGTAG GAAA CTACTGGGA TTTTTATTTTTGCGT LSL_0074 92594 - 93130 + | BioY protein TERM 132 93179 - 93204 + F 91 -5.5 -5.89947 | opp_overlap 93179 TCAATATTCAAAAAA CGCTAGGAATT AAGT AATTTCTAACG TTTTTTTTAAGTTTG TERM 133 93204 - 93179 - f 80 -5.5 -5.1615 | opp_overlap 93179 TCAATATTCAAAAAA CGCTAGGAATT AAGT AATTTCTAACG TTTTTTTTAAGTTTG dacC 93373 - 94629 + | D-alanyl-D-alanine serine-type carboxypeptidase TERM 134 94667 - 94630 - f 93 -11.5 -3.69256 | opp_overlap 94637 94661, overlap 94637 ACTGATGCAATATAA GAGAAAAGACGAAGTTC AAAT GAATTTCGTCTTTTTTC AGCATTTGTCATGAA TERM 135 94637 - 94660 + F 100 -10.4 -5.07107 | opp_overlap 94630 94637 CAATATAAGAGAAAA GACGAAGTTC AAAT GAATTTCGTC TTTTTTCAGCATTTG TERM 136 94660 - 94637 - f 90 -8.2 -4.79373 | opp_overlap 94637, overlap 94630 CAATATAAGAGAAAA GACGAAGTTC AAAT GAATTTCGTC TTTTTTCAGCATTTG LSL_0076 94842 - 95618 + | DeoR family transcriptional regulator TERM 137 96427 - 96465 + T 100 -16.2 -4.18421 | opp_overlap 96427 TACTATAGAATAAAA CCCGCGATAGATCTAAGT AGA AATTAGATCTGTCGTGGG TTATTTATATGCTTA TERM 138 96465 - 96427 - T 100 -11.8 -4.85918 | opp_overlap 96427 TACTATAGAATAAAA CCCGCGATAGATCTAAGT AGA AATTAGATCTGTCGTGGG TTATTTATATGCTTA TERM 139 97217 - 97182 - T 95 -9.1 -5.27335 | opp_overlap 97182 97179 CTTTTTAAATAAAAA CGTCCATGTAAATCT ATCATG AGATAAACATGGACG TCAATTTATATGCTT TERM 140 97182 - 97217 + T 72 -9.1 -2.74645 | opp_overlap 97182, overlap 97179 CTTTTTAAATAAAAA CGTCCATGTAAATCT ATCATG AGATAAACATGGACG TCAATTTATATGCTT LSL_0077 97936 - 97235 - | hypothetical protein LSL_0078 99414 - 97936 - | multidrug resistance protein B LSL_0079 99569 - 100015 + | MerR family transcriptional regulator gloA 100015 - 100395 + | glyoxalase family protein TERM 141 100439 - 100401 - T 100 -6.2 -5.85737 | opp_overlap 100401 ACACGAATAAAAAAA GTTAAATCTGATCATT TGATTTC AAGGGTCAGATTTAAC TTTTTTAAATTGTGC TERM 142 100401 - 100439 + T 100 -9.9 -5.1925 | gap 1, opp_overlap 100401 ACACGAATAAAAAAA GTTAAATCTGATCATTTG ATTT CAAG-GGTCAGATTTAAC TTTTTTAAATTGTGC LSL_0081 101130 - 100444 - | hypothetical protein TERM 143 101207 - 101261 + r 100 -17.9 -2.75528 | gap 1, opp_overlap 101207 101211, overlap 101211 GATATAGATATAGGA CCAATTTTCTAATTTATACAATGTAA ACGG TTAT-TTGTATAAATTAGAAAATTGG TCCTATCTTAAAAAT TERM 144 101261 - 101207 - R 100 -15.7 -2.75311 | gap 1, opp_overlap 101207 101211, overlap 101211 GATATAGATATAGGA CCAATTTTCTAATTTATACAATGTAA ACGG TTAT-TTGTATAAATTAGAAAATTGG TCCTATCTTAAAAAT TERM 145 101211 - 101257 + r 88 -11.5 -3.28003 | gap 1, opp_overlap 101207 101211, overlap 101207 TAGATATAGGACCAA TTTTCTAATTTATACAATGTAA ACGG TTAT-TTGTATAAATTAGAAAA TTGGTCCTATCTTAA TERM 146 101257 - 101211 - R 77 -9.3 -3.27259 | gap 1, opp_overlap 101211 101207, overlap 101207 TAGATATAGGACCAA TTTTCTAATTTATACAATGTAA ACGG TTAT-TTGTATAAATTAGAAAA TTGGTCCTATCTTAA LSL_0082 102583 - 101288 - | putative sugar-binding protein LSL_0083 103249 - 102593 - | two-component response regulator baeS 104566 - 103265 - | two component system histidine kinase TERM 147 104287 - 104269 - G 71 -3.2 -5.09895 | opp_overlap 104269, overlap 104273 TAGTTAGCCAAAAAA TTAATACT ATT AGTAATAA TTCTAGCCAGAGTAA TERM 148 104403 - 104389 - G 73 -3.6 -5.11613 | opp_overlap 104400, overlap 104400 ATACTACCCAAAAAA GTAATC TAA AATTAC CAGGTATGACCTGTA rbsB 105555 - 104563 - | D-ribose-binding protein TERM 149 105933 - 105912 - g 70 -4.6 -4.65916 | TGGACCTCAAGAAAA TTTTAAGA GTTGTA TCTTAAAA CCTGATGAAGGCCCA TERM 150 106030 - 106040 + G 71 -6.8 -4.08692 | TTAGTAGATTTATGG GGTG GAA CACC TTTTAACCAAGCTTC manX 105826 - 106824 + | PTS system, mannose-specific IIAB component LSL_0087 106843 - 107652 + | PTS system, mannose-specific IIC component TERM 151 108231 - 108213 - g 71 -5.2 -4.46212 | opp_overlap 108229 TGGTTTATTACAAAA GGTAACTC GTG GAGCTTCC ATGATGGGTATGTTC LSL_0088 107671 - 108585 + | PTS system, mannose-specific IID component LSL_0089 108607 - 108996 + | hypothetical protein TERM 152 109008 - 109045 + T 80 -5.8 -5.07652 | gap 1, opp_overlap 109013, overlap 109003 109013 TTAATAAATATTAAA TAGAGGCTGGTATATGT GAAAA ACAT-TGCCAGCTTTTA TTTTATTTTCAGACA TERM 153 109013 - 109040 + T 86 -5.7 -5.40279 | gap 1, opp_overlap 109013, overlap 109008 109003 AAATATTAAATAGAG GCTGGTATATGT GAAAA ACAT-TGCCAGC TTTTATTTTATTTTC TERM 154 109063 - 109106 + T 100 -12 -4.74285 | gap 1, opp_overlap 109072, overlap 109072 TTATTTTCAGACAGA CAAGAAAAAGCTCCAAGGAAT ATT ATTCCTTAGAGC-TTTACTTG TTTTATGTTCTCAAT TERM 155 109098 - 109072 - T 100 -14.6 -5.27206 | opp_overlap 109072 109063 GACAGACAAGAAAAA GCTCCAAGGAAT ATT ATTCCTTAGAGC TTTACTTGTTTTATG TERM 156 109072 - 109098 + T 100 -12.4 -4.23244 | opp_overlap 109072, overlap 109063 GACAGACAAGAAAAA GCTCCAAGGAAT ATT ATTCCTTAGAGC TTTACTTGTTTTATG LSL_0090 110671 - 109121 - | hypothetical protein TERM 157 111114 - 111128 + G 77 -10 -3.01712 | overlap 111116 AAGTATATAACTTTT CAGCTG GTC CAGCTG TGTTACCAAAAGAAG serC 111092 - 112183 + | phosphoserine aminotransferase serA 112191 - 113375 + | D-3-phosphoglycerate dehydrogenase LSL_0093 113377 - 113973 + | Uracil DNA glycosylase superfamily protein TERM 158 113974 - 113997 + F 100 -8.2 -5.52986 | opp_overlap 113974 113971 ATTAAGAATAAATAA TAGTCTGGCA AAAA TGTCAGGCTA TTTTTTTGATCAAAT LSL_0094 114069 - 114566 + | hypothetical protein TERM 159 114575 - 114597 + F 84 -3.4 -5.8901 | overlap 114578 AGAATAGTTTAAAAG GTGTGTGGAT ATG ATCTGCATGC TTTTTTGTTTTGTAT TERM 160 115185 - 115203 + G 70 -3.8 -5.00884 | TAGCAATTCACCATA TTGTCAAG TAT CGTGGCAA TTTTTTAGAAAAAGT TERM 161 117835 - 117821 - g 74 -2.1 -5.5208 | TTAGAAGATAAAAAA GCAGA AGATG TCTAC GATAAGGTAAATGAT LSL_0095 114740 - 118189 + | hypothetical protein LSL_0097 118871 - 118704 - | hypothetical protein LSL_0096 118318 - 118758 + | hypothetical protein TERM 162 118780 - 118807 + gF 100 -14.4 -2.95774 | opp_overlap 118758 118780 118786, overlap 118786 TTTAAGAATAAAAAA TAAAAAGGAGTC AGAT GACTCCTTTTTA TGTATAGTCCATATA TERM 163 118807 - 118780 - Gf 100 -14.4 -5.64873 | opp_overlap 118780 118786, overlap 118758 118786 TTTAAGAATAAAAAA TAAAAAGGAGTC AGAT GACTCCTTTTTA TGTATAGTCCATATA TERM 164 118786 - 118801 + gF 95 -9 -5.05601 | opp_overlap 118780 118786, overlap 118780 AATAAAAAATAAAAA GGAGTC AGAT GACTCC TTTTTATGTATAGTC TERM 165 118801 - 118786 - Gf 100 -9 -5.84011 | opp_overlap 118786 118780, overlap 118780 AATAAAAAATAAAAA GGAGTC AGAT GACTCC TTTTTATGTATAGTC cas1 118952 - 119857 + | CRISPR-associated protein cas2 119835 - 120140 + | CRISPR-associated protein LSL_0100 120137 - 120808 + | CRISPR-associated Csn2 family protein TERM 166 122828 - 122806 - f 77 -7.8 -3.98842 | opp_overlap 122806 CATAATATTTATAAA TCTATCAGAA ATT TTCTGGTAGA TTTTTTTAGTGTAAA TERM 167 122806 - 122828 + F 100 -10 -5.58454 | opp_overlap 122806 CATAATATTTATAAA TCTATCAGAA ATT TTCTGGTAGA TTTTTTTAGTGTAAA TERM 168 122831 - 122845 + F 70 -4.4 -4.81249 | ATTTTCTGGTAGATT TTTTTA GTG TAAAAA TTTTTGAGTTTAAGA LSL_0105 122941 - 123261 + | PadR family transcriptional regulator TERM 169 123640 - 123654 + G 77 -8.6 -3.52906 | TAACAATTATTGCTT TAGCTG GAG CAGCTA TCTTTATAACCCTAA LSL_0106 123264 - 123869 + | hypothetical protein LSL_0107 123872 - 124837 + | hypothetical protein TERM 170 124877 - 124865 - g 72 -2.7 -5.28683 | ATTAATATGAAAAAA TTGAC TAA ATCAA ATGATAAAGTTTTAA LSL_0108 124856 - 125086 + | stress-responsive transcriptional regulator PspC TERM 171 125123 - 125100 - f 72 -2.4 -5.33785 | opp_overlap 125100, overlap 125104 AATGAGTATAAAAAA GTATGTTTAG GAAA CTGAGCATAC TTTTTTATTAGCAGG TERM 172 125100 - 125123 + F 93 -6.8 -5.4505 | opp_overlap 125100 125104 AATGAGTATAAAAAA GTATGTTTAG GAAA CTGAGCATAC TTTTTTATTAGCAGG LSL_0109 125426 - 125737 + | hypothetical protein TERM 173 125721 - 125737 + F 70 -8.1 -3.14136 | overlap 125695 GTCCAGTGGATGATG CTAAACA ATT TGTTTAG TTAAATAATTAGTAA TERM 174 125763 - 125800 + F 100 -11.6 -5.66684 | opp_overlap 125766 125771 AGTAATAGTTTGAAG TCAGCGAATCAAATTT TTGATT AAATTTGGTTCGTTGA TTTTTTTATAGATTA glpK 126139 - 127653 + | glycerol kinase TERM 175 129443 - 129433 - g 70 -2.4 -5.3321 | overlap 129434 AACGAAGAAGAAAAA GCAG CTG CAGC TAAGCAATTAGATGA glpO 127666 - 129495 + | Alpha-glycerophosphate oxidase glpF 129531 - 130238 + | glycerol uptake facilitator protein TERM 176 130261 - 130287 + F 100 -13.2 -5.76633 | opp_overlap 130263 130266 ATATATATTTCAGAG GAGAAGTGTAAA GGG TTTGCACTTCTC TTTTTTTATATATAA TERM 177 130532 - 130543 + G 70 -4.4 -4.73614 | overlap 130519 GTTTGTCTGATGCTA CATC AGGG GATG TTTATTTTGATGGTA LSL_0113 130357 - 131445 + | spermidine/putrescine ABC transporter ATP-binding protein potB 131461 - 132261 + | spermidine/putrescine ABC transporter permease TERM 178 133012 - 133026 + G 72 -5.8 -4.27441 | TTCTCTTTAGTTTTA GTAATA GGT TATTAC TTTATTAGTCGTGAT potC 132262 - 133098 + | spermidine/putrescine ABC transporter permease potD 133098 - 134183 + | spermidine/putrescine-binding protein TERM 179 134225 - 134184 - f 77 -8.2 -3.82378 | opp_overlap 134190, overlap 134190 ATGTATCGACAATAA TAATAAGCAGTATTGGTA TTTTTT CACCAGTACTGCTTTTTA ATGCCAATTAAACGC TERM 180 134190 - 134219 + F 89 -8.7 -4.73388 | opp_overlap 134184 134190 CGACAATAATAATAA GCAGTATTGGT ATTTTTTC ACCAGTACTGC TTTTTAATGCCAATT TERM 181 134219 - 134190 - f 74 -7.2 -4.13244 | opp_overlap 134190, overlap 134184 CGACAATAATAATAA GCAGTATTGGTA TTTTTT CACCAGTACTGC TTTTTAATGCCAATT TERM 182 134853 - 134880 + F 100 -12 -5.55855 | ATATTTCTTCAATTG CCCGCACGGATT AAGT ACTTCGTGCGGG TTTTGTTTTTTTAGG TERM 183 134894 - 134922 + F 100 -16.1 -5.5112 | GGTTTTGTTTTTTTA GGCATCTCCTGCA AAA TGTAGGAGGTGCC TTTTTTGTTGGTACG TERM 184 135921 - 135906 - g 75 -4.7 -4.90266 | opp_overlap 135906 GTTATCAATCAAAAA CAAGC AGATAA GCTTG GTTTGAAAGTACCAG LSL_0117 134991 - 135983 + | ABC transporter substrate-binding protein LSL_0118 135980 - 136876 + | ABC transporter permease protein LSL_0119 136873 - 137637 + | ABC transporter, ATP-binding protein TERM 185 137647 - 137671 + T 100 -13.7 -4.87626 | opp_overlap 137647 AACTAAGCAAAAAAA GCTACTGGTTT TTT AAACCGGTAGC TTTTTACTATTCAAC TERM 186 137671 - 137647 - T 100 -11.5 -5.66868 | opp_overlap 137647 AACTAAGCAAAAAAA GCTACTGGTTT TTT AAACCGGTAGC TTTTTACTATTCAAC LSL_0120 138307 - 137678 - | hypothetical protein TERM 187 138239 - 138271 + g 76 -4.3 -5.13722 | overlap 138241 GGCAATTACGACAAG TATCAGTAGAAATTT GAA AAAATTCTGTTGATG TTTTCTTTTGCTAAA TERM 188 138462 - 138480 + r 100 -8.9 -5.71712 | ATATTATACGGTTCG GCTAGGA GAAGG TCCTAGC TTTTTTTATATCGAA greA 138959 - 138486 - | transcription elongation factor GreA LSL_0122 139088 - 139195 + | hypothetical protein TERM 189 139301 - 139350 + F 78 -2.1 -5.85425 | GATGAAGTAGTCAAA GTGCTTTGTCCATGTTCCTTA TTTTAATT TAAGGGGCGTGGTGTAGGCAC TTTTTTATTTGTTTA trmE 139402 - 140796 + | tRNA modification GTPase TrmE gidA 140820 - 142733 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 190 142940 - 142969 + T 86 -5.8 -5.4251 | ATATAACTCCTTTTT CTCCATGGTT TTTTGTTGTT GACCATGGAG TTTTTTATATATAAG TERM 191 143094 - 143136 + T 100 -10.8 -4.28254 | gap 1, opp_overlap 143094 143095, overlap 143095 ATAGTTATATTAAAA CCCGCTAGGAATCAACGTT TTTAGT AACGT-GATTTCTAGCGGA TTTTAAGTCTTGAGA TERM 192 143136 - 143094 - T 100 -10.8 -4.36262 | gap 1, opp_overlap 143094 143095, overlap 143095 ATAGTTATATTAAAA CCCGCTAGGAATCAACGTT TTTAGT AACGT-GATTTCTAGCGGA TTTTAAGTCTTGAGA TERM 193 143135 - 143095 - T 89 -12.1 -3.21034 | gap 1, opp_overlap 143095 143094, overlap 143094 TAGTTATATTAAAAC CCGCTAGGAATCAACGTT TTTAGT AACGT-GATTTCTAGCGG ATTTTAAGTCTTGAG TERM 194 143095 - 143135 + T 100 -14.3 -3.1647 | gap 1, opp_overlap 143094 143095, overlap 143094 TAGTTATATTAAAAC CCGCTAGGAATCAACGTT TTTAGT AACGT-GATTTCTAGCGG ATTTTAAGTCTTGAG gpmB 143853 - 143182 - | phosphoglycerate mutase LSL_0126 144772 - 143909 - | CAAX amino protease TERM 195 144871 - 144851 - H 76 -3.3 -5.5112 | overlap 144858 TCGATTAATAAAAAA GAATTGACT TGG AGTTAACTC GAAGGTGTATGTTAA fldA 144908 - 145378 + | flavodoxin LSL_0128 145393 - 145803 + | hypothetical protein TERM 196 146183 - 146154 - f 88 -6.6 -5.13521 | opp_overlap 146154 AAATGATTTAAAAAA TATCACTATATC AAAAGA GATATCGTGATA TTTTTTATTAATTTC TERM 197 146154 - 146183 + F 100 -6.6 -5.59655 | opp_overlap 146154 AAATGATTTAAAAAA TATCACTATATC AAAAGA GATATCGTGATA TTTTTTATTAATTTC TERM 198 146536 - 146503 - f 71 -8.1 -3.31766 | opp_overlap 146503, overlap 146501 AATTAGATGATAACA CGTCCCTAGAATGAC AAAA GTTGTTCTAGGGGCG TTTTTTTATGTTCAA TERM 199 146503 - 146536 + F 100 -14.7 -5.80817 | opp_overlap 146503 146501 AATTAGATGATAACA CGTCCCTAGAATGAC AAAA GTTGTTCTAGGGGCG TTTTTTTATGTTCAA TERM 200 146679 - 146668 - g 71 -3 -5.18371 | TTTTAGAAAATAAAA TTTC AAGA GAAA AATTAAAATTTGTTG TERM 201 147178 - 147190 + G 70 -4.1 -4.69464 | overlap 147174 GTACTTGGGGAGTTA TCGTT GAT GACGA TTTTTGGAATGTTTT metE 146574 - 147698 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase LSL_0130 147764 - 148606 + | ABC transporter substrate-binding protein LSL_0131 148628 - 149689 + | ABC transporter, ATP-binding protein LSL_0132 149682 - 150383 + | ABC transporter permease protein LSL_0133 150425 - 151573 + | succinyl-diaminopimelate desuccinylase TERM 202 151572 - 151620 + T 100 -12.7 -4.2204 | opp_overlap 151576, overlap 151575 151576 151579 TGAGATATTTTGAAT AAAATAAGGGTTGGAAAAGATAA TTG TCGTCTTTTCCAACCCTTAATTA TTATTTATTGAAATT TERM 203 151575 - 151617 + T 100 -14.4 -4.21772 | opp_overlap 151576, overlap 151572 151576 151579 GATATTTTGAATAAA ATAAGGGTTGGAAAAGATAA TTG TCGTCTTTTCCAACCCTTAA TTATTATTTATTGAA TERM 204 151576 - 151616 + T 100 -17.9 -3.11979 | opp_overlap 151576, overlap 151575 151572 151579 ATATTTTGAATAAAA TAAGGGTTGGAAAAGATAA TTG TCGTCTTTTCCAACCCTTA ATTATTATTTATTGA TERM 205 151616 - 151576 - T 100 -17.9 -4.65078 | opp_overlap 151575 151572 151576 151579 ATATTTTGAATAAAA TAAGGGTTGGAAAAGATAA TTG TCGTCTTTTCCAACCCTTA ATTATTATTTATTGA TERM 206 151579 - 151613 + T 100 -15.2 -3.66439 | opp_overlap 151576, overlap 151576 151575 151572 TTTTGAATAAAATAA GGGTTGGAAAAGATAA TTG TCGTCTTTTCCAACCC TTAATTATTATTTAT LSL_0134 152269 - 151625 - | NAD(P)H-dependent quinone reductase LSL_0135 152437 - 153270 + | acetoacetate decarboxylase LSL_0136 153287 - 154168 + | 3-hydroxybutyryl-CoA dehydrogenase TERM 207 154180 - 154220 + T 100 -11.6 -5.63374 | gap 2, opp_overlap 154180 TTAAAAGCATAAAAA TAGTATCAG-AGAAG-GATA TAT TATCACTTCTTCTGATACTA TTTTTTTAATCTTCA TERM 208 154220 - 154180 - T 100 -11.6 -5.09245 | gap 2, opp_overlap 154180 TTAAAAGCATAAAAA TAGTATCAG-AGAAG-GATA TAT TATCACTTCTTCTGATACTA TTTTTTTAATCTTCA LSL_0137 155581 - 154226 - | NADH peroxidase TERM 209 157366 - 157355 - g 72 -5.8 -4.36433 | GTAAATACGAAGAAA CAGG GATA CCTG GAAAAGTTATTGGAG LSL_0138 155872 - 157971 + | ornithine decarboxylase TERM 210 157976 - 158005 + T 100 -13.1 -4.44461 | opp_overlap 157976 157982, overlap 157982 TTGTGTTATAGTGAA TAAAAAGCGACAT TTTT GTGTCGCTTTTTA TTTTATCGAATTGTT TERM 211 158005 - 157976 - T 90 -12.4 -3.12351 | opp_overlap 157976 157982, overlap 157982 TTGTGTTATAGTGAA TAAAAAGCGACA TTTTTG TGTCGCTTTTTA TTTTATCGAATTGTT TERM 212 157982 - 157999 + T 100 -7.7 -5.54907 | opp_overlap 157976 157982, overlap 157976 TATAGTGAATAAAAA GCGACAT TTTT GTGTCGC TTTTTATTTTATCGA TERM 213 157999 - 157982 - T 85 -7 -5.12068 | opp_overlap 157982 157976, overlap 157976 TATAGTGAATAAAAA GCGACA TTTTTG TGTCGC TTTTTATTTTATCGA LSL_0139 158555 - 158031 - | hypothetical protein TERM 214 158959 - 158992 + H 100 -6.7 -5.93252 | overlap 158989 AACTAAGGTGGTACC GCGGTTTTCGCCC TTATATTT GAGTGAGAACCGC TTTTTTATTTTTAGA LSL_0140 160075 - 160761 + | ABC transporter permease protein TERM 215 160870 - 160880 + G 76 -6.8 -4.56978 | overlap 160865 TTAATTACATCAGTT GCAG CAG CTGC TTTCTTATTTACAGG LSL_0141 160831 - 161646 + | ABC transporter substrate-binding protein TERM 216 161697 - 161666 - T 100 -10.2 -4.83593 | opp_overlap 161666, overlap 161656 AAGAACTAGTAAAAA TTACTGGATCCCAA TTAA TCGGGGCCCAGTAA TTTTTTGCTTTTTTT TERM 217 161666 - 161697 + T 100 -8 -5.62552 | opp_overlap 161656 161666 AAGAACTAGTAAAAA TTACTGGATCCCAA TTAA TCGGGGCCCAGTAA TTTTTTGCTTTTTTT TERM 218 161739 - 161793 + T 100 -20.6 -2.69468 | opp_overlap 161739 161743 161790, overlap 161743 AATCTAGACATAGGA CCAATTTTCTAATTTGTGCAAGTAAA CGT TTAATTTGCATAAATTAGAAAATTGG TCCTATGTCCAAATG TERM 219 161793 - 161739 - T 100 -16.2 -2.73543 | opp_overlap 161739 161743, overlap 161743 161790 AATCTAGACATAGGA CCAATTTTCTAATTTGTGCAAGTAAA CGT TTAATTTGCATAAATTAGAAAATTGG TCCTATGTCCAAATG TERM 220 161789 - 161743 - T 78 -9.8 -3.27259 | opp_overlap 161739 161743, overlap 161739 TAGACATAGGACCAA TTTTCTAATTTGTGCAAGTAAA CGT TTAATTTGCATAAATTAGAAAA TTGGTCCTATGTCCA TERM 221 161743 - 161789 + T 100 -14.2 -3.26545 | opp_overlap 161743 161739, overlap 161739 TAGACATAGGACCAA TTTTCTAATTTGTGCAAGTAAA CGT TTAATTTGCATAAATTAGAAAA TTGGTCCTATGTCCA LSL_0142 162375 - 161821 - | hypothetical protein LSL_0143 162486 - 162632 + | hypothetical protein gdh 162829 - 163623 + | glucose-1-dehydrogenase LSL_0145 163647 - 164489 + | glucose uptake protein TERM 222 164533 - 164493 - T 95 -12.9 -2.76263 | opp_overlap 164496 164501, overlap 164501 GCTATCATGTAATTA CGATAAAAGCGACTTTCAT GTG ATGAAAATCGCTTTTATTA ATTATTAGGCCAATT TERM 223 164496 - 164530 + T 100 -14.6 -3.53444 | opp_overlap 164493 164501, overlap 164501 ATCATGTAATTACGA TAAAAGCGACTTTCAT GTG ATGAAAATCGCTTTTA TTAATTATTAGGCCA TERM 224 164501 - 164525 + T 100 -10.1 -4.84262 | opp_overlap 164493 164501, overlap 164496 GTAATTACGATAAAA GCGACTTTCAT GTG ATGAAAATCGC TTTTATTAATTATTA TERM 225 164525 - 164501 - T 100 -12.3 -4.51097 | opp_overlap 164501 164496, overlap 164493 GTAATTACGATAAAA GCGACTTTCAT GTG ATGAAAATCGC TTTTATTAATTATTA LSL_0146 165409 - 164531 - | LysR family transcriptional regulator LSL_0147 165518 - 166387 + | 2,5-diketo-D-gluconic acid reductase LSL_0148 166411 - 167205 + | Short chain dehydrogenase TERM 226 167277 - 167234 - Tf 100 -12.9 -3.74178 | gap 1, opp_overlap 167234, overlap 167227 GAAGCAAAGTTCAAA GATCATCAAAGATT-ACGTT ATTAA AACGTTAATCTTTAATGATC TTTATTTAATATAAA TERM 227 167234 - 167277 + TF 95 -10.7 -4.53602 | gap 1, opp_overlap 167234 167227 GAAGCAAAGTTCAAA GATCATCAAAGATT-ACGTT ATTAA AACGTTAATCTTTAATGATC TTTATTTAATATAAA LSL_0149 167540 - 167313 - | hypothetical protein LSL_0150 167467 - 167679 + | hypothetical protein TERM 228 168149 - 168120 - fH 75 -9.5 -2.80556 | overlap 168119 GTCAAAATAATCAAG TTGTTAATTCTAC AACT GTAGAACCAACAA ATAATGCAACTATGA TERM 229 176942 - 176960 + FH 77 -3.9 -5.41359 | ATAAAATTATGTGAT GATTAAC AATAG GTTAGTC TTTTTTAATTTGATT acoA 177223 - 178320 + | pyruvate dehydrogenase E1 component alpha subunit acoB 178323 - 179300 + | pyruvate dehydrogenase E1 component beta subunit TERM 230 179297 - 179283 - f 72 -7.2 -3.91402 | opp_overlap 179283 GTAGAGAAAGTTAAA GAAGTT GTG AACTTC TAATTTGGAGGGTGA aceF 179317 - 180597 + | dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex lpd 180605 - 182011 + | dihydrolipoamide dehydrogenase lplA 182098 - 183117 + | lipoate-protein ligase A TERM 231 183153 - 183127 - f 70 -8.1 -2.99558 | opp_overlap 183127 183132, overlap 183126 183132 CAATAGTAATTAAAG TAAAACTCGTC GATTT GGCGAGTTTTA TTTATACTAGGCTGA TERM 232 183127 - 183153 + F 93 -11 -3.9712 | opp_overlap 183126 183127 183132, overlap 183132 CAATAGTAATTAAAG TAAAACTCGTCG ATT TGGCGAGTTTTA TTTATACTAGGCTGA TERM 233 183132 - 183148 + F 82 -6.5 -5.02323 | opp_overlap 183132 183127 183126, overlap 183127 GTAATTAAAGTAAAA CTCGTCG ATT TGGCGAG TTTTATTTATACTAG LSL_0158 183230 - 183994 + | integral membrane protein TERM 234 184012 - 184040 + F 100 -11.1 -5.03314 | AAGAATAAGATACTG GCACCGATAAGAT CAA AGCTTATTGGTGC TTTTTTGAAGGTAGG LSL_0159 184064 - 185197 + | hypothetical protein TERM 235 185202 - 185239 + T 80 -6.3 -4.80178 | opp_overlap 185203 185204, overlap 185203 185204 TATTTCATTAAAAAA ATGGCAGCAAAGCCT AGTTTTAA AGACTTTGCTGCCGC TTTTGTTAATTAATC TERM 236 185238 - 185203 - T 100 -9.8 -5.52986 | opp_overlap 185202 185203 185204, overlap 185204 ATTTCATTAAAAAAA TGGCAGCAAAGCCT AGTTTTAA AGACTTTGCTGCCG CTTTTGTTAATTAAT TERM 237 185203 - 185238 + T 80 -9.8 -3.47023 | opp_overlap 185203 185204, overlap 185202 185204 ATTTCATTAAAAAAA TGGCAGCAAAGCCT AGTTTTAA AGACTTTGCTGCCG CTTTTGTTAATTAAT TERM 238 185237 - 185204 - T 100 -13.3 -3.90707 | opp_overlap 185203 185202 185204, overlap 185203 TTTCATTAAAAAAAT GGCAGCAAAGCCT AGTTTTAA AGACTTTGCTGCC GCTTTTGTTAATTAA TERM 239 185204 - 185237 + T 82 -11.1 -2.67129 | opp_overlap 185204 185203, overlap 185203 185202 TTTCATTAAAAAAAT GGCAGCAAAGCCT AGTTTTAA AGACTTTGCTGCC GCTTTTGTTAATTAA LSL_0160 185599 - 185249 - | hypothetical protein LSL_0161 185735 - 186004 + | hypothetical protein LSL_0162 186021 - 187364 + | hypothetical protein TERM 240 187457 - 187489 + F 93 -6.5 -5.52096 | opp_overlap 187473 TTTAAGATAAATTAA GAATAAAGCAGGT AAATAAA ATCTGTTTTATTC TTTTTTATTAAGTTT LSL_0163 187630 - 188385 + | transcription regulator of fructose operon fruK 188382 - 189296 + | 1-phosphofructokinase fruA 189324 - 191279 + | PTS system, fructose-specific IIABC component TERM 241 191318 - 191283 - f 77 -9.3 -3.20235 | opp_overlap 191283 191292 191311, overlap 191281 191287 191292 AATGAAAAATAATTA TTAAGAAAAGTGGAT GTAAAA ATCCACTTTTTTTAA TTGTAAAAGATATTT TERM 242 191283 - 191318 + F 88 -11.5 -3.31515 | opp_overlap 191281 191283 191287 191292, overlap 191292 191311 AATGAAAAATAATTA TTAAGAAAAGTGGAT GTAAAA ATCCACTTTTTTTAA TTGTAAAAGATATTT TERM 243 191292 - 191309 + F 87 -5.6 -5.68023 | opp_overlap 191292 191287 191283 191281, overlap 191283 TAATTATTAAGAAAA GTGGAT GTAAAA ATCCAC TTTTTTTAATTGTAA TERM 244 191309 - 191292 - f 74 -5.6 -4.75219 | opp_overlap 191283 191292, overlap 191287 191283 191281 TAATTATTAAGAAAA GTGGAT GTAAAA ATCCAC TTTTTTTAATTGTAA TERM 245 191779 - 191790 + G 73 -4.4 -4.9218 | AATTATACTTAACCT TTGG AATT CCAA TTTTTATAGTAAGTG LSL_0166 191403 - 192605 + | hypothetical protein LSL_0167 192586 - 193263 + | hypothetical protein TERM 246 193311 - 193269 - T 75 -5 -4.95155 | opp_overlap 193274, overlap 193274 TTTAGACTAGAAAAA GTAAAGACATAGTTTTGTTT ACA AAGCAAAGCTATGTCTTTTT CTATATATTAAAATG TERM 247 193274 - 193306 + T 100 -13.7 -5.09685 | opp_overlap 193274 193269 ACTAGAAAAAGTAAA GACATAGTTTTGTTT ACA AAGCAAAGCTATGTC TTTTTCTATATATTA TERM 248 193306 - 193274 - T 89 -9.3 -4.3902 | opp_overlap 193274, overlap 193269 ACTAGAAAAAGTAAA GACATAGTTTTGTTT ACA AAGCAAAGCTATGTC TTTTTCTATATATTA TERM 249 193325 - 193361 + T 100 -11 -4.88786 | opp_overlap 193325 TTCTATATATTAAAA TGCCCTGTAACTAGGT CACTT ACCTAATTACAGGACA TTTATTTATTTTAAT TERM 250 193361 - 193325 - T 100 -15.4 -4.39166 | opp_overlap 193325 TTCTATATATTAAAA TGCCCTGTAACTAGGT CACTT ACCTAATTACAGGACA TTTATTTATTTTAAT LSL_0168 194819 - 193380 - | amino acid permease TERM 251 195009 - 194998 - R 77 -3 -5.64304 | overlap 194991 TAATAGAATAAAAAA TTGA TTTT TCAA AATTTATGCAAATAA TERM 252 195056 - 195029 - R 100 -7.2 -5.65927 | gap 1, opp_overlap 195029 TATGCAAATAAAAAA TCAATAGACGCTA TTA TA-CGCCTATTGA TTGAATATATATTAA LSL_0169 196886 - 195072 - | lead, cadmium, zinc and mercury transporting ATPase TERM 253 197015 - 196987 - R 75 -8.4 -3.61213 | gap 1, opp_overlap 196994, overlap 196994 AATTATAAATAAAAG CAAAAAAGCAAGT CAAA ACTTGC-TTTTTG TCTCAATGTGTAGGT TERM 254 196994 - 197009 + r 89 -7.6 -4.99638 | opp_overlap 196987 196994 AATAAAAGCAAAAAA GCAAGT CAAA ACTTGC TTTTTGTCTCAATGT TERM 255 197009 - 196994 - R 100 -7.6 -5.52347 | opp_overlap 196994, overlap 196987 AATAAAAGCAAAAAA GCAAGT CAAA ACTTGC TTTTTGTCTCAATGT LSL_0170 197881 - 197018 - | DegV family protein TERM 256 198500 - 198490 - g 80 -6.8 -4.74767 | opp_overlap 198485 AGAACGAATAGAAAA GGTG AAC CACC AATTCGTTCATTTTT rfaG 198103 - 199038 + | glycosyltransferase TERM 257 199438 - 199422 - g 70 -7.3 -3.76048 | opp_overlap 199432 GTCTAAGTAATATAA TTCCGGA AGT TCCAGAA AAATTGGATGTGCTA guaA 199067 - 199732 + | GMP synthase TERM 258 199737 - 199770 + T 100 -10.6 -5.4387 | opp_overlap 199737 TTAAAGACTAAAAAA TGTTTAACTGATAT TTGTGT ATATCGGTTAAACA TTTTTTAATTTATAT TERM 259 199770 - 199737 - T 100 -8.4 -5.32699 | opp_overlap 199737 TTAAAGACTAAAAAA TGTTTAACTGATAT TTGTGT ATATCGGTTAAACA TTTTTTAATTTATAT comA 200134 - 199775 - | ComA operon protein 2 menB 200216 - 201037 + | naphthoate synthase menE 201037 - 202470 + | O-succinylbenzoic acid--CoA ligase TERM 260 202823 - 202809 - g 73 -3.6 -5.11937 | opp_overlap 202809 AAGAATGTGAAAAAA TCTAAC CGA ATTAGA TTGGTAGTATCTTCA TERM 261 203112 - 203100 - g 70 -4.1 -4.788 | opp_overlap 203100 AAAGTAATTGAAAAA GATGC TAA ACATC TTGGTAGTACAAAAA LSL_0176 202545 - 203285 + | ErfK family protein TERM 262 203334 - 203289 - f 82 -6.4 -4.93696 | opp_overlap 203295, overlap 203280 203290 203295 GCTAAACATTAAAAA TGAAAATGCCTTTTAGAAAA TTTATT TTTTCTGAAAGGCATTTTTT TAATTGACATTTGGT TERM 263 203333 - 203290 - f 84 -9.9 -3.55133 | opp_overlap 203295, overlap 203289 203295 CTAAACATTAAAAAT GAAAATGCCTTTTAGAAAA TTTATT TTTTCTGAAAGGCATTTTT TTAATTGACATTTGG TERM 264 203328 - 203295 - f 100 -9.8 -4.80167 | opp_overlap 203295, overlap 203290 203289 CATTAAAAATGAAAA TGCCTTTTAGAAAA TTTATT TTTTCTGAAAGGCA TTTTTTTAATTGACA TERM 265 203295 - 203328 + F 100 -12 -5.63103 | opp_overlap 203295 203290 203289 CATTAAAAATGAAAA TGCCTTTTAGAAAA TTTATT TTTTCTGAAAGGCA TTTTTTTAATTGACA TERM 266 204306 - 204334 + G 78 -7.5 -4.17048 | opp_overlap 204314, overlap 204314 TGCACAAAATGTCAG TCATGTAAGCAGT ATG ACTGCTGGTATGA TTCTTTTGCCAGGGG LSL_0177 203419 - 204789 + | multidrug resistance protein B LSL_0178 204794 - 205207 + | MarR family transcriptional regulator TERM 267 205223 - 205240 + F 100 -6.3 -5.84381 | opp_overlap 205223 205226 ATTAGTATTGGAAAA GTATCCT GTTT AGGATGC TTTTTTTGTTAATAA TERM 268 205356 - 205413 + G 72 -5.8 -4.30719 | opp_overlap 205350 205349 205367, overlap 205352 205358 GAAAGCAACTGTTGA TGGTTCAACAATGATTGGTAGAAATG ATGATA CATTTCTACCAATCACTCCTCAACGA TTTGTTATGCAACCA TERM 269 205402 - 205367 - g 100 -16.5 -3.62597 | opp_overlap 205358 205356 TTGATGGTTCAACAA TGATTGGTAGAAATG ATGATA CATTTCTACCAATCA CTCCTCAACGATTTG TERM 270 205596 - 205578 - g 93 -8.2 -5.66868 | AATTAACGAAAAAAA TGTAGCAA TGT CTGCTACA GAATCTGTATATGGG LSL_0179 205303 - 206721 + | dipeptidase A TERM 271 206778 - 206736 - T 100 -10.8 -4.88795 | opp_overlap 206736 ATTTAATAAAATAAA TAAGGTTTAAAGGACAACGA TAA TTGTTGAACTTTAAACCTTA TTTTTTAATATTGTG TERM 272 206736 - 206778 + T 100 -13 -5.30189 | opp_overlap 206736 ATTTAATAAAATAAA TAAGGTTTAAAGGACAACGA TAA TTGTTGAACTTTAAACCTTA TTTTTTAATATTGTG LSL_0180 207865 - 206783 - | LytR family transcriptional regulator TERM 273 207730 - 207715 - G 70 -4 -4.84274 | CAACGATAGCAAAAA CCACTA AAGA TAGTAG TAACCAAAAAAAGAT LSL_0181 208244 - 207879 - | hypothetical protein LSL_0182 209091 - 208246 - | hypothetical protein LSL_0183 209213 - 210070 + | LysR family transcriptional regulator LSL_0184 210088 - 210753 + | phosphatase wecD 210768 - 211238 + | acetyltransferase TERM 274 211240 - 211275 + F 89 -7.9 -5.1101 | gap 1, opp_overlap 211240 TAAGAAATCTGTAAA GTTGTTATTTG-CTCT AATTA AGAGATAAATAACAAC TTTTTTGCATGATAA LSL_0186 211461 - 213146 + | acetolactate synthase alsD 213168 - 213884 + | Alpha-acetolactate decarboxylase TERM 275 214149 - 214180 + F 93 -8.8 -4.77165 | opp_overlap 214149 214151 GATATTTGATAGATA GAGCACATACCT CTTTAGTT GGGTGTGTGCTC TTTTATTATCCAGAC LSL_0188 214228 - 215679 + | lysine-specific permease TERM 276 215897 - 215929 + F 100 -12.7 -5.47218 | opp_overlap 215897 ACCGCGTAAGAAGAA GTCCTTTCGTCCCAA TTT TGGGGACGGGAGGGC TTTTTTTACGTCAAG TERM 277 216317 - 216299 - g 75 -8.2 -3.794 | GCCTAACTTACCAAA TCCTACTA TTC CAGTAGGA CCAGATGAAGATTCA serS 215973 - 217250 + | seryl-tRNA synthetase TERM 278 217297 - 217257 - f 79 -9.9 -2.83046 | opp_overlap 217263, overlap 217263 GAAAAATAATAATAT TTAAAAGGGAGATGGTTAA TTA TTAGCCATCTCTCTTTTTA GGTGAATAAAGTTGA TERM 279 217263 - 217291 + F 100 -13.3 -4.67353 | opp_overlap 217257 217263 TAATAATATTTAAAA GGGAGATGGTTAA TTA TTAGCCATCTCTC TTTTTAGGTGAATAA TERM 280 217291 - 217263 - f 88 -8.9 -4.32048 | opp_overlap 217263, overlap 217257 TAATAATATTTAAAA GGGAGATGGTTAA TTA TTAGCCATCTCTC TTTTTAGGTGAATAA TERM 281 217672 - 217660 - f 76 -6.3 -4.67692 | overlap 217651 TGAAAACTAAACAAA GTTTC GAT GAAAC AAATGTGCAGGGCTT TERM 282 217937 - 217979 + F 71 -7.9 -3.48689 | gap 1, opp_overlap 217937 AAACAGGTGCTAATA CCGTATATC-TCTAAGGATC GCAT GATCCTTAGATGAAAGATGG TTCTGCTATCGCTTT TERM 283 219297 - 219278 - f 72 -9.2 -2.65808 | opp_overlap 219281 219284, overlap 219275 219290 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 284 219478 - 219494 + F 83 -6.7 -4.77165 | overlap 219476 219482 TTTAGGCCCATTCTT TTATGAA AAT TTCATAA TTTTCTTATGGGGCC TERM 285 219573 - 219600 + F 70 -4.2 -5.00196 | overlap 219575 219577 219594 TCGATCCCGCTAGGC TCCATTGATAAC GAAA GTTATCAAATGA TTTTGTTCTTTGAAA TERM 286 220028 - 220009 - f 82 -9.4 -3.66803 | opp_overlap 220008 220007 CGGGAAGAGCCCAAA CTAAGAAG CTTG CTTCTTAG GGTTGTAGGACTGAA TERM 287 223442 - 223456 + F 95 -4.3 -6.14618 | GGTGCATTGCGTTAA CTGAA TATAT TTCAG TTTTTTTATTTTGTA TERM 288 223680 - 223659 - f 95 -10.3 -4.26188 | opp_overlap 223659 CTGATATAGCTAAAA TGAGAGATT CTTC AATCTCTCA TTTTTTGTCTTGACA TERM 289 223659 - 223680 + F 100 -10.3 -5.47159 | opp_overlap 223659 CTGATATAGCTAAAA TGAGAGATT CTTC AATCTCTCA TTTTTTGTCTTGACA TERM 290 223845 - 223874 + F 100 -10.9 -5.97575 | TTCTATTTATACCTA CGCTTAGTTTGGA CAAT TCTAAACTAAGTG TTTTTTTTATAGGTT TERM 291 223985 - 224012 + F 100 -17.2 -5.4505 | opp_overlap 223982 223981 TGTCGTATAAACTTT TACCCCGGAAAT GATT ATTTCCGGGGTA TTTTTTATTAAGGAG TERM 292 224754 - 224739 - g 75 -4.8 -4.84359 | TGACGGTGATAAAAA TGAAAA ATTA TTTTCA GAAACTGAGTACCAT TERM 293 224834 - 224814 - g 75 -6.9 -4.21086 | CAATAAATTAAAGAA GGATGCA ATTATTA TGCATCC AGGTCCTGTAAACCG pyrB 224035 - 224985 + | aspartate carbamoyltransferase catalytic subunit pyrC 224985 - 226274 + | dihydroorotase carA 226274 - 227362 + | carbamoyl phosphate synthase small subunit TERM 294 228310 - 228291 - g 77 -8.6 -3.56092 | opp_overlap 228291 GCATTAGCTTCTAAA GCAACAGG TTAT CCTATTGC TAAATTAGCAGCTAA TERM 295 228374 - 228362 - g 88 -7.7 -5.01811 | GGATGAAATTAAAAA TCCTG TTA CAGGA ACAACATTTGCTGAA carB 227355 - 230540 + | carbamoyl phosphate synthase large subunit pyrD 230559 - 231503 + | dihydroorotate dehydrogenase 1B TERM 296 231645 - 231698 + F 76 -3.4 -5.37865 | gap 1 CACAATACTGTTAAA CTCTCTTT-GAGTAAAGTAGGGATT AAAAA AATTCTTGCACTACTTTAAAGAGAG TTTTTTGATTGTTAA TERM 297 231788 - 231772 - f 80 -9.5 -3.40592 | TAGACTAAAAGTCAA TGTAGGT CAA ACCTACA AGAGAGGATGGAGAA LSL_0195 231806 - 232273 + | transcriptional regulator ctsR TERM 298 233690 - 233680 - g 74 -5.4 -4.7268 | overlap 233670 AAAGATTCAAGAAAA GCTT GAA AAGC AAATCCAACGTGACA clpC 232289 - 234781 + | negative regulator of genetic competence TERM 299 236305 - 236319 + G 73 -7.2 -3.91144 | opp_overlap 236305 CGAATTATTACAAAA CCAATT TAG AATTGG TTTATCACGTATGGA TERM 300 236319 - 236305 - g 80 -7.2 -4.51097 | opp_overlap 236305 CGAATTATTACAAAA CCAATT TAG AATTGG TTTATCACGTATGGA rpoB 235025 - 238624 + | DNA-directed RNA polymerase subunit beta TERM 301 240437 - 240413 - g 88 -7.9 -4.84311 | opp_overlap 240413 GCCTACACAAGAAAA CTTAACAGGAA TGA CTCCTGATAAG TACTTTGTAGAACCA rpoC 238653 - 242318 + | DNA-directed RNA polymerase subunit beta' TERM 302 242337 - 242357 + T 100 -12.7 -6.12328 | opp_overlap 242337 ATAGAAGTAAAAAAA TCAGGTAGA TTT TCTACCTGA TTTTTTTTATATTAT TERM 303 242357 - 242337 - T 100 -12.7 -5.69379 | opp_overlap 242337 ATAGAAGTAAAAAAA TCAGGTAGA TTT TCTACCTGA TTTTTTTTATATTAT pilD 243079 - 242423 - | Type IV prepilin leader peptidase rpsL 243364 - 243777 + | 30S ribosomal protein S12 rpsG 243812 - 244282 + | 30S ribosomal protein S7 TERM 304 244293 - 244333 + F 72 -2.7 -5.4477 | GGTAATTTTCACAAA TGGCTGTTATATGGTTTGT TTA GTAAAGCCTATAATAGTCA TTTTTTTGAAGGTTT efg 244403 - 246496 + | elongation factor G TERM 305 246518 - 246540 + F 100 -12.8 -5.83822 | opp_overlap 246518 GTAAATTAAGATAAA GAACTCAGAC GAA GTCTGGGTTC TTTTTTTTACATATA TERM 306 246540 - 246518 - f 95 -10.6 -4.31 | opp_overlap 246518 GTAAATTAAGATAAA GAACTCAGAC GAA GTCTGGGTTC TTTTTTTTACATATA sir2 246600 - 247331 + | NAD-dependent deacetylase LSL_0204 247349 - 248533 + | aminotransferase class I and II LSL_0205 248688 - 249377 + | two-component response regulator TERM 307 249459 - 249477 + G 71 -7.6 -3.70848 | TTAGGCGAAGGTATT TTAACAAT TAT ATTGTTAA TTCTGTTAAATATGT TERM 308 250326 - 250309 - g 77 -5.7 -4.94262 | TAGATGAAAAAGAAA TAGAAAT AAGA ATTTCTA ATGATGGAGAACCTA baeS 249405 - 250556 + | two component system histidine kinase TERM 309 250551 - 250575 + F 81 -4.4 -5.4148 | AATGTAGTAAAAAAA TCTTAGCTTT AAATG GAAGTTAAGA TTTTTTGGTTCTTTG TERM 310 250633 - 250654 + F 100 -6.7 -5.80951 | opp_overlap 250633 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTGTTTTAAGT TERM 311 251340 - 251350 + F 71 -5.4 -4.71584 | opp_overlap 251340 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 312 251868 - 251888 + F 84 -9.9 -3.38522 | overlap 251867 251872 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA TERM 313 252075 - 252034 - f 84 -6.1 -5.19275 | gap 1, opp_overlap 252046, overlap 252037 ATGGAGAAAATAAAA GAAGGACCG-TAATGTAAAA AAA TTTTACATTATCAGTCCTAA ATATTATACAACCAG TERM 314 252072 - 252037 - f 100 -12.2 -4.66746 | gap 1, opp_overlap 252046, overlap 252034 GAGAAAATAAAAGAA GGACCG-TAATGTAAAA AAA TTTTACATTATCAGTCC TAAATATTATACAAC TERM 315 252145 - 252166 + F 100 -6.7 -5.80951 | opp_overlap 252145 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTGTTTTAAGT TERM 316 252852 - 252862 + F 71 -5.4 -4.71584 | opp_overlap 252852 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 317 253380 - 253400 + F 84 -9.9 -3.38522 | overlap 253379 253384 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA TERM 318 253587 - 253546 - f 84 -6.1 -5.19275 | gap 1, opp_overlap 253558, overlap 253549 ATGGAGAAAATAAAA GAAGGACCG-TAATGTAAAA AAA TTTTACATTATCAGTCCTAA ATATTATACAACCAG TERM 319 253584 - 253549 - f 100 -12.2 -4.66746 | gap 1, opp_overlap 253558, overlap 253546 GAGAAAATAAAAGAA GGACCG-TAATGTAAAA AAA TTTTACATTATCAGTCC TAAATATTATACAAC LSL_0207 253676 - 254545 + | galactose mutarotase-like LSL_0208 254666 - 255835 + | hypothetical protein TERM 320 255843 - 255871 + F 87 -5.4 -5.67967 | gap 1 TTAAATAACCCCAAA TCATTGACTGTCG GAGA CG-TGGTCAATGA TTTTTTTATAATGCT dxs 255956 - 257716 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 321 257726 - 257747 + F 91 -8.1 -5.10208 | opp_overlap 257726 GATTAATTGTGAAAA TAGATCTCT ATAT AGAGGTCTA TTTTTATTGCAATTA TERM 322 257814 - 257777 - f 93 -10.1 -4.22535 | ATAATTTTAAAATAA TATTATGACAATGTGTC ATAT GACAACTTGTCATAATA AATCTGAAAGGATTG TERM 323 259578 - 259590 + G 73 -4.1 -4.87893 | TATTAGAAGAATATT TGCTT CTG AGGCA TTTTTAATTGGAATT LSL_0210 257836 - 259821 + | ABC transporter, ATP-binding protein TERM 324 259972 - 259962 - g 74 -6.8 -4.27686 | opp_overlap 259961 259962 TAAAATTAGCCAAAA TCCC TCG GGGA AGTTTTTATCAATAT TERM 325 260014 - 260001 - g 74 -5.3 -4.66938 | opp_overlap 259999 260001 ATTTTGAAGATAAAA GAGAT CTAT ATCTC TATATTGCTCAAAAA LSL_0211 259832 - 260482 + | TetR family transcriptional regulator LSL_0212 260504 - 262237 + | multidrug ABC transporter permease/ATP-binding protein TERM 326 264068 - 264086 + F 100 -11 -5.64421 | opp_overlap 264068 CGAGATAATAAAAAA GATGGGCG AAC CGCTCATC TTTTTTGTTTGCAAT TERM 327 264086 - 264068 - f 100 -8.8 -5.60689 | opp_overlap 264068 CGAGATAATAAAAAA GATGGGCG AAC CGCTCATC TTTTTTGTTTGCAAT TERM 328 264999 - 265021 + F 100 -8.5 -5.74122 | opp_overlap 264999 AATACTGCCGCATAA GTCAGAGAA AGTAA TTCTCTGGC TTTTTTTGTATAATC LSL_0213 265057 - 266436 + | ATPase associated with chromosome architecture/replication TERM 329 266781 - 266765 - g 71 -6.5 -4.15669 | opp_overlap 266761 AATTGAGAAATCAAA TGGTGGC ACT GCCAGCA GATGTTGATCCACAA LSL_0214 266536 - 267093 + | LemA protein htpX 267105 - 267992 + | heat shock protein HtpX TERM 330 268004 - 268031 + T 100 -10 -5.60993 | opp_overlap 268003, overlap 268006 GTAAAAATAGTTAAG TGCAGTAGTTCA ATTG TGAGCTACTGTA TTTTTTTGTAAAAAA TERM 331 268006 - 268029 + T 95 -10.4 -4.45201 | opp_overlap 268003, overlap 268004 AAAAATAGTTAAGTG CAGTAGTTCA ATTG TGAGCTACTG TATTTTTTTGTAAAA TERM 332 268071 - 268049 - T 100 -7.8 -5.75342 | opp_overlap 268048 268051 268067 TTTTTGTAAAAAAAA TACCAGTC AATAAAA GACTGGTA CATTATCATATTCAA TERM 333 268217 - 268177 - T 71 -8.7 -2.80307 | gap 1, opp_overlap 268187, overlap 268187 TAAAGTGGCATCAGA CTTACC-AAAATAGTATA TTATAT TATACTATTTTTGGCAAG CATAATTTGTTACAG rep 270506 - 268239 - | ATP-dependent DNA helicase TERM 334 270624 - 270598 - R 100 -7.5 -5.96894 | opp_overlap 270598 270596 270618, overlap 270618 ACCTAAAGAAAAAAA GTTCAAATTGA ATTAA TCAATTTAAAC TCTTTTTAAAATTTA czcD 271655 - 270630 - | cobalt-zinc-cadmium resistance protein TERM 335 271925 - 271950 + H 100 -11.3 -5.4505 | ACCACGGCTTTGTTC GTCCTATTCAT ATTT ATGAGTAGGAC TTTTTTATTAAGGAG trpS 271973 - 272992 + | tryptophanyl-tRNA synthetase II gppA 273081 - 274010 + | exopolyphosphatase TERM 336 274020 - 274053 + F 100 -12.7 -5.7946 | opp_overlap 274022 274031 AAATAGTTACTTGAA GAGCTTTAGAAGAGT TTTT ACTCTTTTAAAGTTC TTTTTTTATTGACAA LSL_0220 274135 - 274860 + | ABC transporter, ATP-binding protein LSL_0221 274863 - 275975 + | ABC transporter permease protein LSL_0222 275988 - 276635 + | TetR family transcriptional regulator TERM 337 276697 - 276737 + T 93 -8.5 -4.74706 | gap 1, opp_overlap 276697 TAGTTATATTAAAAA CCGCTAGGAATCAACGTT TTTAGT AACGT-GATTTCTAACGG TTTTTAAGTCTTGAA TERM 338 276737 - 276697 - T 93 -8.5 -4.81551 | gap 1, opp_overlap 276697 TAGTTATATTAAAAA CCGCTAGGAATCAACGTT TTTAGT AACGT-GATTTCTAACGG TTTTTAAGTCTTGAA LSL_0223 277581 - 276778 - | amino acid ABC transporter substrate-binding protein TERM 339 277025 - 277056 + g 78 -2.4 -5.64328 | gap 1, overlap 277011 TGTTTATTAAGATAA GCT-GTATATTCATA GTC TGTGAGGATACCAGC TTTTATTTTTTTATT LSL_0224 277661 - 278926 + | 3-hydroxy-3-methylglutaryl-coenzyme A reductase / 3-hydroxy-3-methylglutaryl-coenzyme Auctase TERM 340 279221 - 279205 - g 70 -3.7 -4.98128 | opp_overlap 279207, overlap 279207 ACAACTAAAAAGAAA GACTTAG ATA CTAAGTT CATGGCAACAGGATT LSL_0225 278926 - 279882 + | IpaB/EvcA family protein TERM 341 280174 - 280158 - g 71 -6.6 -4.09511 | AACATGGGTTGAAAA TTGAGC AAAAA GCTCAA GCATTAGGAATGCAA metG 279986 - 282013 + | methionyl-tRNA synthetase / protein secretion chaperonin CsaA TERM 342 282057 - 282026 - f 80 -7.5 -4.23045 | opp_overlap 282026 TAATGATTCAAGAAA CACTAATTTGTAA TTTAAT TTACAAGTTAGTG TTTTTTTGTTTGGTG TERM 343 282026 - 282057 + F 100 -9.7 -5.99154 | opp_overlap 282026 TAATGATTCAAGAAA CACTAATTTGTAA TTTAAT TTACAAGTTAGTG TTTTTTTGTTTGGTG tatD 282147 - 282917 + | TatD family deoxyribonuclease LSL_0228 282928 - 283485 + | ribonuclease M5 ksgA 283497 - 284387 + | dimethyladenosine transferase TERM 344 284588 - 284572 - g 72 -5.1 -4.8143 | opp_overlap 284575, overlap 284575 GTAAGAAGTCAAAAA CTAGACA TGG TGTCTTG CGTGAAACTTTTCCT LSL_0230 284475 - 284708 + | VEG protein TERM 345 284772 - 284752 - f 74 -9.7 -2.77537 | opp_overlap 284752, overlap 284751 284749 ATTGATAAATAATAG GGTTGGGAT TTT ATCCCAGCC TTTTTTACAGAACAA TERM 346 284752 - 284772 + F 100 -11.9 -5.00616 | opp_overlap 284751 284749 284752 ATTGATAAATAATAG GGTTGGGAT TTT ATCCCAGCC TTTTTTACAGAACAA LSL_0231 284804 - 285652 + | hypothetical protein TERM 347 286167 - 286181 + G 73 -8.6 -3.21934 | opp_overlap 286169, overlap 286166 ATAATCCGACTGGAA CAGTGT TTG ACACTG ATTTTATGGAAGAAG avtA 285665 - 286783 + | transaminase argR 286827 - 287297 + | arginine repressor ArgR TERM 348 287305 - 287338 + T 100 -16.3 -4.5442 | opp_overlap 287305 287309, overlap 287309 TGAAATAACAGCAAA TAAATAGGTTTGGCG AAGA TGCCAAACCTATTTA TTTTGTCGTTAACGA TERM 349 287338 - 287305 - T 100 -15.6 -4.04415 | opp_overlap 287305 287309, overlap 287309 TGAAATAACAGCAAA TAAATAGGTTTGGC GAAGAT GCCAAACCTATTTA TTTTGTCGTTAACGA TERM 350 287334 - 287309 - T 100 -12 -4.57787 | opp_overlap 287305 287309, overlap 287305 ATAACAGCAAATAAA TAGGTTTGGC GAAGAT GCCAAACCTA TTTATTTTGTCGTTA TERM 351 287309 - 287334 + T 100 -12.7 -4.82863 | opp_overlap 287309 287305, overlap 287305 ATAACAGCAAATAAA TAGGTTTGGCG AAGA TGCCAAACCTA TTTATTTTGTCGTTA ispE 288205 - 287336 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase amtB 288421 - 289728 + | ammonium transporter TERM 352 289772 - 289729 - T 100 -12.1 -4.05069 | gap 1, opp_overlap 289741 289760 289761, overlap 289730 289741 GAAAAAAGAAGATAA CCATAATAAAAAGCAGCAAG ACGAA CTTGCTGCTTTTT-TCATGA AAAAAGATTATAAAT TERM 353 289771 - 289730 - T 100 -13.4 -3.00601 | gap 1, opp_overlap 289741 289760 289761, overlap 289729 289741 AAAAAAGAAGATAAC CATAATAAAAAGCAGCAAG ACGAA CTTGCTGCTTTTT-TCATG AAAAAAGATTATAAA TERM 354 289741 - 289761 + T 100 -11.2 -5.14563 | opp_overlap 289741 289730 289729, overlap 289760 TAACCATAATAAAAA GCAGCAAG ACGAA CTTGCTGC TTTTTTCATGAAAAA TERM 355 289761 - 289741 - T 100 -11.2 -5.24416 | opp_overlap 289741 289760, overlap 289730 289729 TAACCATAATAAAAA GCAGCAAG ACGAA CTTGCTGC TTTTTTCATGAAAAA xerC 291086 - 289941 - | Phage integrase TERM 356 291222 - 291205 - R 80 -9.1 -3.57792 | opp_overlap 291205 TTATGTATTTTTAAA CCCGTCG ATTT CAACGGG TTTCACTAGAACTCA LSL_0237 291630 - 291235 - | hypothetical protein LSL_0238 291944 - 291510 - | hypothetical protein LSL_0239 292384 - 291941 - | hypothetical protein LSL_0240 293300 - 292377 - | cII-like protein, phage associated LSL_0241 293603 - 293385 - | hypothetical protein LSL_0242 294485 - 293709 - | cI-like repressor, phage associated LSL_0243 294545 - 294694 + | hypothetical protein TERM 357 294704 - 294680 - f 85 -5.1 -5.66684 | overlap 294691 GAATGTACAAAAAAA GAAGAAACC AATTAAA GATTTCTTC TTCAAAATGAAATTG LSL_0244 295016 - 295222 + | hypothetical protein TERM 358 295419 - 295389 - g 77 -3.4 -5.50723 | gap 1 TTACTAAAAGAAAAA GACTTAACACACG AACAAG CGTATGC-AAGTC TTCAATATGCGTATA LSL_0245 295260 - 295475 + | hypothetical protein LSL_0246 296082 - 295477 - | hypothetical protein TERM 359 296236 - 296197 - H 73 -4.6 -5.00616 | opp_overlap 296195 296197 CTTCTTTCGAAAAAA TTAGCAAATAAACA TTTTTAGGAGGC TGTCTATTTGCTAA TACTTATTTTACTAC LSL_0247 296306 - 296497 + | DNA binding protein, phage associated LSL_0248 296500 - 296640 + | hypothetical protein LSL_0249 296806 - 296633 - | hypothetical protein cro 296879 - 297070 + | Cro-like protein, phage associated TERM 360 297287 - 297243 - g 76 -6.8 -4.54449 | gap 1, overlap 297274 ACACTTCAGAGAAAA TATTGATTTTAGCTCCGTAGT TACA ACTACACA-CCAAAATCAATA TGGTGGGACTAAAGA LSL_0251 297109 - 297837 + | Phage antirepressor protein LSL_0252 297864 - 298049 + | hypothetical protein TERM 361 298197 - 298207 + F 75 -2.6 -5.54338 | TGTAGCGTGTATAGC TTAT GTA ATAA TTTTTATTTTGGTTA LSL_0253 298348 - 298527 + | hypothetical protein LSL_0254 298520 - 298657 + | hypothetical protein TERM 362 298700 - 298679 - g 100 -9.5 -5.63517 | GGTGGAAATAAAAAA GATAGGTGC TGCA ACACCTATC AGTATGAGTTCTGAT LSL_0255 298644 - 298880 + | hypothetical protein LSL_0256 298873 - 299589 + | hypothetical protein TERM 363 299993 - 299979 - g 83 -5 -5.4833 | overlap 299980 CTAGCGAACAAAAAA CGTTAC AAT GTAACA TCAATGAAACGAACC LSL_0257 299582 - 300565 + | replisome organizer, phage associated LSL_0258 300562 - 300765 + | hypothetical protein LSL_0259 300769 - 301035 + | hypothetical protein TERM 364 301415 - 301398 - g 77 -4.9 -5.11836 | gap 1 ATATTGAAAAGAAAA GCAAGATC ATA GA-CTTGC AAGAAAAGAGAGGTT LSL_0260 301016 - 301432 + | replication terminator protein, phage associated LSL_0261 301437 - 302165 + | hypothetical protein LSL_0262 302158 - 302382 + | hypothetical protein LSL_0263 302384 - 302581 + | hypothetical protein LSL_0264 302587 - 302916 + | hypothetical protein LSL_0265 302917 - 303093 + | hypothetical protein LSL_0266 303160 - 303522 + | hypothetical protein LSL_0267 303512 - 303745 + | hypothetical protein LSL_0268 303759 - 303986 + | hypothetical protein LSL_0270 304471 - 304713 + | hypothetical protein LSL_0271 304728 - 305168 + | hypothetical protein LSL_0272 305179 - 305460 + | hypothetical protein LSL_0273 305478 - 305660 + | hypothetical protein TERM 365 305688 - 305667 - f 100 -8.7 -5.4593 | GGAAAATAATAAAAA GCACGCTCC CTTG GAAACGTGC CACTTAAATCAACTA LSL_0274 305735 - 306175 + | hypothetical protein LSL_0275 306272 - 306517 + | hypothetical protein LSL_0276 306504 - 306944 + | hypothetical protein TERM 366 306961 - 306985 + F 100 -10.9 -5.58522 | opp_overlap 306960 306963 TTAGAATTTATAGAG TAGTCTGAAAA ACT TTTTCAGGCTA TTTTTATTTTATGTA TERM 367 307190 - 307210 + F 74 -5.4 -4.80729 | ATTTCACTTCAAGAA GTCTAGTC TTTAT GGCTAGGC TTTTGTATTATATTT LSL_0277 307201 - 307863 + | DNA packaging, phage associated TERM 368 307873 - 307883 + F 93 -6.8 -5.45802 | overlap 307868 307866 307870 TTTTAAGTCAGTCTA GCCA GGC TGGC TTTTTATTTTGGAGA LSL_0278 307904 - 308056 + | hypothetical protein mcrA 308058 - 308588 + | Phage endonuclease LSL_0280 308767 - 309240 + | Phage terminase small subunit LSL_0281 309240 - 311123 + | terminase large subunit LSL_0282 311113 - 311307 + | Phage head-tail joining protein LSL_0283 311307 - 312482 + | portal protein clpP 312463 - 313182 + | ATP-dependent Clp protease proteolytic subunit LSL_0285 313172 - 314368 + | major head protein LSL_0286 314380 - 314703 + | DNA packaging, phage associated LSL_0287 314696 - 315052 + | Phage head-tail joining protein LSL_0288 315045 - 315437 + | Phage head-tail joining protein LSL_0289 315437 - 315814 + | Phage tail protein TERM 369 315843 - 315829 - g 77 -8.6 -3.52472 | opp_overlap 315828 315829, overlap 315825 ATATGGCTAAATCAA GTACAC ATG GTGTAC GTTATATTGGGCTAG LSL_0290 315816 - 316520 + | Phage major tail protein LSL_0291 316570 - 316968 + | hypothetical protein LSL_0292 316971 - 317177 + | hypothetical protein LSL_0293 317225 - 317638 + | hypothetical protein TERM 370 317634 - 317664 + F 85 -9.2 -4.07568 | opp_overlap 317641 317643, overlap 317641 AGCAAAATGGGGATT TATAAAAGTCAGTT TTG AACTGGCTTTTTTA TTTTGGAGGAAAGGA TERM 371 317641 - 317657 + F 100 -7.3 -5.79595 | opp_overlap 317641 317643, overlap 317634 TGGGGATTTATAAAA GTCAGTT TTG AACTGGC TTTTTTATTTTGGAG LSL_0294 317693 - 321418 + | phage tail tape mesure LSL_0295 321431 - 322258 + | hypothetical protein LSL_0296 322274 - 324586 + | Phage lysin LSL_0297 324579 - 324917 + | hypothetical protein LSL_0298 325026 - 326372 + | hypothetical protein TERM 372 326487 - 326518 + F 80 -7.3 -4.65263 | opp_overlap 326487 326489 TAATTTACAAGATGA TAGCTTTGCAGCC TTTAAT GGCTACAGGGCTA TTTATTTTAGAAAAT LSL_0299 326553 - 326975 + | hypothetical protein TERM 373 327034 - 327023 - g 77 -3 -5.56573 | ATAAAGAAACAAAAA GATA TATG TATC CAGTAAGTGATTATC LSL_0300 326989 - 327396 + | hypothetical protein LSL_0301 327399 - 327581 + | hypothetical protein TERM 374 327659 - 327697 + G 100 -9.7 -4.57837 | gap 1 TATTAGGATATTCAT GGGCGGAGATAG-CGTCA ATTC TGGCGGTTATTTCCGTCC TTTTTAGCGGGGTGT LSL_0302 327634 - 327939 + | hypothetical protein LSL_0303 327936 - 328262 + | hypothetical protein TERM 375 328304 - 328322 + G 85 -6.7 -5.37043 | ATATTAATTACTTTA GCAACGT GTGCA GCGTTGC TTTTTTCTGTGCAGT LSL_0304 328274 - 329542 + | Phage lysin TERM 376 329645 - 329609 - T 75 -9.6 -2.80779 | opp_overlap 329610, overlap 329606 ACTATAATCTAATGA TTACCACTAATTCACA GTTAA TGTGAGTTAGTGGTAT TTTTTTATTGCAAAA TERM 377 329610 - 329644 + T 100 -15.3 -5.7946 | opp_overlap 329609 329606 CTATAATCTAATGAT TACCACTAATTCACA GTTAA TGTGAGTTAGTGGTA TTTTTTTATTGCAAA TERM 378 329809 - 329839 + T 72 -3.4 -5.13354 | overlap 329811 CTTGTAGCGGTTCTT AATTGTATCTGAAA TAG TATCAGATATAATA TTTATTTTTTATAAG TERM 379 329896 - 329937 + T 100 -15.5 -5.52986 | gap 1, opp_overlap 329890 329896 TACCACAAACCATAA GACACCTTGTTTCTACT-AT TGT ATGAGTAGAGGCAAGGTGTC TTTTTTTGCTAACAT TERM 380 329937 - 329896 - T 89 -11.1 -3.65986 | gap 1, opp_overlap 329896, overlap 329890 TACCACAAACCATAA GACACCTTGTTTCTACT-AT TGT ATGAGTAGAGGCAAGGTGTC TTTTTTTGCTAACAT argH 331426 - 330044 - | argininosuccinate lyase argG 332661 - 331450 - | argininosuccinate synthase TERM 381 333199 - 333171 - H 71 -8.8 -2.83517 | opp_overlap 333171, overlap 333168 ATTTAGAGAATAGTA GCCCTCGAGGAT TAAAC ATCTTCGGGGGC TTTTTTTGAAAGGAA TERM 382 333171 - 333199 + H 100 -13.2 -5.40072 | opp_overlap 333168 333171 ATTTAGAGAATAGTA GCCCTCGAGGAT TAAAC ATCTTCGGGGGC TTTTTTTGAAAGGAA araT 333223 - 334398 + | aromatic amino acid aminotransferase ldhA 334414 - 335403 + | D-lactate dehydrogenase LSL_0309 335422 - 336471 + | hypothetical protein TERM 383 336486 - 336524 + F 100 -9.7 -5.4833 | opp_overlap 336486 GTATTTTATCTAAAA CTCGTATCTGTGAAGTT TTATT AACTAAACAGGTACGAG TTTTTTGTTCGGTAA TERM 384 336524 - 336486 - f 80 -7.5 -4.1899 | opp_overlap 336486 GTATTTTATCTAAAA CTCGTATCTGTGAAGTT TTATT AACTAAACAGGTACGAG TTTTTTGTTCGGTAA TERM 385 336634 - 336649 + F 77 -4 -5.4659 | opp_overlap 336628 TCTAATTGATTTAAA CCTTGT TTTA ATAAGG TTTTTATTTGTGTTA mbp2 336947 - 340576 + | mucus binding protein TERM 386 340665 - 340686 + T 100 -6.7 -6.55664 | opp_overlap 340665 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTTTTGTTTTA LSL_0312 341988 - 340699 - | ISL3 family transposase TERM 387 341375 - 341385 + g 74 -5.4 -4.71584 | opp_overlap 341375 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 388 341725 - 341736 + g 70 -4.4 -4.77165 | opp_overlap 341725 341731, overlap 341730 341731 CTTGCATTCAGGACA CAGA TACT TCTG TTTTCTTATAGAAAG TERM 389 341903 - 341923 + g 81 -9.9 -3.38522 | overlap 341902 341907 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA asd 343248 - 342157 - | aspartate-semialdehyde dehydrogenase LSL_0314 343478 - 343876 + | MerR family transcriptional regulator TERM 390 344765 - 344754 - g 76 -4.4 -5.10497 | AACGTATTGAAAAAA TGGA ATTA TCCA AGCGCAGTTTGAAAC purR 344198 - 345037 + | purine operon repressor TERM 391 345084 - 345094 + F 75 -2.6 -5.52384 | TACATGTGTACTTAG TAAA TAA TTTA TTTTTTTAATGAAAC LSL_0316 345168 - 346385 + | macrolide-efflux protein glmU 346528 - 347937 + | glucosamine-1-phosphate acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase TERM 392 348898 - 348861 - g 83 -11.5 -2.94595 | opp_overlap 348861, overlap 348870 AATGGTTATTACAGA CTCTATCAACCTTCCTG AAGA CAAGAAGATTGACAAAG TTGTTCAAGTTTCTG prsA 348028 - 349005 + | ribose-phosphate pyrophosphokinase TERM 393 349021 - 349049 + F 95 -9 -5.00616 | TAATAAACATGTTGA TAAGTCAGTTAC TTTAT GTAGCTGGCTTA TTTTTTGCACAAAAA rimL 349079 - 349603 + | ribosomal-protein-serine acetyltransferase TERM 394 349732 - 349711 - T 83 -4.5 -5.55769 | opp_overlap 349711, overlap 349696 TCGCATAATAAAAAA GCATCTA TTATTTTT TAGATGC CTTTTTATTTGGATC LSL_0320 350593 - 349754 - | 2,5-diketo-D-gluconic acid reductase TERM 395 349875 - 349861 - G 88 -7.2 -5.10154 | opp_overlap 349861 349860 349863 ATTCAAAATCAAAAA TATCCA AGT TGGATA ATTGGTGTTTTGTAG LSL_0321 350835 - 350599 - | hypothetical protein udp 350978 - 351748 + | phosphorylase Pnp/Udp family protein TERM 396 351756 - 351745 - f 74 -3 -5.37593 | opp_overlap 351745 GGCGAAATTAAAAAA CTAA TAAT TTAG CTTGTCTTTAACAAT LSL_0323 351823 - 353445 + | ABC transporter, ATP-binding protein TERM 397 353457 - 353485 + F 100 -6.8 -5.59534 | gap 1, opp_overlap 353457 TTAAGAAAATACAAG GTCATGC-CTTTC TGTT GGAAGTGCATGGC TTTTTTCTTATAATT TERM 398 353533 - 353544 + G 70 -4.4 -4.68103 | opp_overlap 353529, overlap 353529 TATGAAAATTACATG GCAT GGAC ATGC TTTTATTGAAATTCA LSL_0324 353519 - 354178 + | metallo-beta-lactamase family protein TERM 399 354198 - 354221 + T 100 -11.8 -4.79826 | opp_overlap 354198 354200 CTAAATTGACAAAAA GGCCTGGAAT GAAA ATTCCAGGTC TTTTTCCTAATATCT TERM 400 354221 - 354198 - T 100 -9.6 -4.94992 | opp_overlap 354198, overlap 354200 CTAAATTGACAAAAA GGCCTGGAAT GAAA ATTCCAGGTC TTTTTCCTAATATCT TERM 401 354219 - 354200 - T 82 -10.8 -2.72462 | opp_overlap 354198, overlap 354198 AAATTGACAAAAAGG CCTGGAAT GAAA ATTCCAGG TCTTTTTCCTAATAT birA 355193 - 354228 - | biotin operon repressor / biotin--[acetyl-CoA-carboxylase] synthetase LSL_0326 355319 - 356422 + | hypothetical protein TERM 402 356836 - 356858 + G 80 -10.6 -3.05536 | overlap 356840 TTGAGTACTTTAGGA GCGATTGCAG AAG CTGCGATTGC TATTGCAAGTGGTTT LSL_0327 356419 - 357168 + | hypothetical protein TERM 403 357321 - 357359 + F 100 -12 -5.36441 | opp_overlap 357321 CGAATAGTAAGTAAA GCATAAAATTAGATGGGG TTT TCTTATCTAGTTTTATGC TTTTTTATATGGACA LSL_0328 357379 - 358413 + | hypothetical protein TERM 404 358474 - 358441 - g 71 -5.5 -4.52502 | CGGAAAAACAAAGAA TATTCTGCAGTATAT ACCC ATATACGACAAAATA TATAGAGGCTTTTAA spoVK 358413 - 360020 + | ATPases of the AAA+ class LSL_0330 360024 - 360908 + | hypothetical protein LSL_0331 360871 - 361320 + | hypothetical protein TERM 405 362103 - 362089 - g 72 -2.8 -5.28281 | opp_overlap 362091, overlap 362091 AGAAAAGAAACAAAA GATTGC TGG GCAATT TAATCGTGACAATAA LSL_0332 361325 - 363325 + | hypothetical protein LSL_0333 363318 - 365933 + | hypothetical protein LSL_0334 365987 - 367081 + | hypothetical protein LSL_0335 367099 - 367794 + | hypothetical protein TERM 406 367853 - 367809 - T 95 -12.5 -3.71888 | opp_overlap 367803 367814, overlap 367814 AATCATAGCTAATAA CAAAAGACTGATAATCTACGA ATT TAATAGATTATCAGTCTTTTT AAAATATTTTATCTT TERM 407 367848 - 367814 - T 100 -12.4 -4.91084 | opp_overlap 367814 367803, overlap 367809 TAGCTAATAACAAAA GACTGATAATCTACGA ATT TAATAGATTATCAGTC TTTTTAAAATATTTT TERM 408 367814 - 367848 + T 95 -10.3 -4.69464 | opp_overlap 367809 367814, overlap 367803 TAGCTAATAACAAAA GACTGATAATCTA CGAATTTAA TAGATTATCAGTC TTTTTAAAATATTTT LSL_0336 368319 - 367852 - | hypothetical protein LSL_0337 369204 - 368383 - | HAD superfamily hydrolase LSL_0338 370575 - 369220 - | hydrolase guaA 370767 - 371435 + | GMP synthase LSL_0340 371538 - 371975 + | hypothetical protein rpoE 372021 - 372611 + | DNA-directed RNA polymerase subunit delta TERM 409 372701 - 372730 + F 90 -8 -4.80417 | opp_overlap 372700 GAACGGATAATAAGG CTCCCTATTC AAAGATAAGC GAATAGGGAG TTTCTTGTTTTTGTG pyrG 372786 - 374384 + | CTP synthetase LSL_0343 374455 - 374655 + | hypothetical protein TERM 410 374669 - 374701 + F 100 -7.9 -5.63517 | opp_overlap 374669 AAAAATAGATAGAGA CTACTTTCGAATC TGTTGAT GATTTGGAAGTAG TTTTTTGTTTAAGGG TERM 411 375240 - 375259 + G 76 -6.4 -4.47707 | overlap 375238 AAATTCAGATGCCTA CTGGGCAG GAGT TTGTCCAG TTATTTTTAATAAAG LSL_0344 374722 - 375282 + | hypothetical protein murA 375503 - 376774 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 412 377710 - 377694 - g 72 -9.5 -2.69471 | overlap 377693 GCAGCCTTATATAAG CCAAAGA AAT TCTTTGG AGCAGCACGTAATAT rho 376785 - 378068 + | transcription termination factor Rho rpmE2 378175 - 378423 + | 50S ribosomal protein L31 type B TERM 413 378481 - 378446 - f 77 -7.6 -4.12198 | opp_overlap 378446 GATAACTTGTCAAAA TCTGTTACTTGCCTCA TAAT TGAGGTGGGTAACAGA TTTTTTTGTTGTGAG TERM 414 378446 - 378481 + F 100 -14.2 -5.88565 | opp_overlap 378446 GATAACTTGTCAAAA TCTGTTACTTGCCTCA TAAT TGAGGTGGGTAACAGA TTTTTTTGTTGTGAG LSL_0348 378509 - 379165 + | hypothetical protein TERM 415 379166 - 379202 + T 100 -17.7 -5.06816 | opp_overlap 379170 TCATTTAGATTCTAA TAAAGACAGCTAAAATT TTG AGTTTTAGCTGTCTTTA TTTTTATTCCAAAAT TERM 416 379198 - 379170 - T 100 -11.9 -4.19678 | opp_overlap 379166 TTAGATTCTAATAAA GACAGCTAAAATT TTG AGTTTTAGCTGTC TTTATTTTTATTCCA srmB 381556 - 379190 - | superfamily II DNA/RNA helicase TERM 417 381009 - 380999 - G 71 -5.4 -4.46656 | opp_overlap 380999 CCTATAAGATGAAAA TGGA AAA TCCA ATTTGTTAATAGAAT TERM 418 381763 - 381748 - H 79 -4.8 -5.27206 | opp_overlap 381748 381751, overlap 381742 TATAGATAATAAAAA CATTTT TACA AAAATG TCTGATCTTATTTTG LSL_0350 381839 - 382477 + | hypothetical protein LSL_0351 382495 - 383532 + | hypothetical protein LSL_0352 383543 - 385324 + | hypothetical protein TERM 419 385371 - 385332 - f 100 -12.5 -4.10331 | opp_overlap 385332 385369, overlap 385335 385338 CGAATTAATTATAAA GAATAATGGAAACTC AATGAAAAAA GAGTTTCCATTATTC TTTTTTAGAATGTTT TERM 420 385332 - 385371 + F 100 -12.5 -5.10077 | opp_overlap 385332 385335 385338, overlap 385369 CGAATTAATTATAAA GAATAATGGAAACTC AATGAAAAAA GAGTTTCCATTATTC TTTTTTAGAATGTTT TERM 421 385368 - 385335 - f 83 -8.4 -4.15832 | opp_overlap 385332, overlap 385332 385338 ATTAATTATAAAGAA TAATGGAAACTC AATGAAAAAA GAGTTTCCATTA TTCTTTTTTAGAATG LSL_0353 385489 - 386802 + | guanine-hypoxanthine permease TERM 422 386862 - 386826 - f 74 -5.2 -4.90136 | opp_overlap 386827, overlap 386827 AATGAATATTAAAAA TCAGCATTAACTTGAT GAATA ATCTTGTTAATGCTGT TTTTTGCTACTAAGA TERM 423 386861 - 386827 - f 76 -8.7 -3.52455 | opp_overlap 386827, overlap 386826 ATGAATATTAAAAAT CAGCATTAACTTGAT GAATA ATCTTGTTAATGCTG TTTTTTGCTACTAAG TERM 424 386827 - 386861 + F 95 -8.7 -5.1861 | opp_overlap 386827 386826 ATGAATATTAAAAAT CAGCATTAACTTGAT GAATA ATCTTGTTAATGCTG TTTTTTGCTACTAAG LSL_0354 386949 - 387719 + | hypothetical protein murF 387857 - 389227 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 425 389283 - 389270 - f 71 -6.7 -4.12254 | TATGATGAGAAAGAA GCCAT GATA ATGGC TGAACGTTAATAGAA TERM 426 390046 - 390032 - g 77 -5.8 -4.66537 | opp_overlap 390014 390031 390036, overlap 390014 390027 TTTGTGAAGACAAAA GAATTT GAA AAATTC GATATTATGACTAGA srmB 389363 - 390841 + | ATP-dependent RNA helicase TERM 427 390849 - 390891 + F 77 -8.8 -3.6215 | opp_overlap 390855, overlap 390855 390888 AAGCTTAATTAAGTT TAAGAACTGATGTATACT GGTAAAA AGTATATATCAGTTTTTG TTTGCAATAAATTGG TERM 428 390855 - 390885 + F 91 -7.8 -5.28942 | opp_overlap 390855, overlap 390849 AATTAAGTTTAAGAA CTGATGTATACT GGTAAAA AGTATATATCAG TTTTTGTTTGCAATA acpS 390971 - 391378 + | Holo-[acyl-carrier protein] synthase alr 391397 - 392512 + | alanine racemase LSL_0359 392559 - 392807 + | hypothetical protein TERM 429 393164 - 393146 - g 73 -7.4 -3.72231 | opp_overlap 393137 GCAGAGAGTCAATAA CGCACTGA AAA TCAGTGTG GGGTTGGCCTCTATA LSL_0360 392823 - 393191 + | PemK family transcriptional regulator TERM 430 393187 - 393226 + T 80 -7.3 -4.64861 | opp_overlap 393189 393190, overlap 393190 CCTCTATACATAAAA AATGAGGATGATTAATC TTTTAT GGTTAATCATCCTCTTA TTTGTTTTAAAAGAA TERM 431 393224 - 393189 - T 100 -7.7 -5.4251 | opp_overlap 393187 393190, overlap 393190 TCTATACATAAAAAA TGAGGATGATTAATC TTTTAT GGTTAATCATCCTCT TATTTGTTTTAAAAG TERM 432 393223 - 393190 - T 90 -11.2 -3.84422 | opp_overlap 393190 393187, overlap 393189 CTATACATAAAAAAT GAGGATGATTAATC TTTTAT GGTTAATCATCCTC TTATTTGTTTTAAAA TERM 433 393190 - 393223 + T 100 -13.4 -4.43397 | opp_overlap 393189 393190, overlap 393187 CTATACATAAAAAAT GAGGATGATTAATC TTTTAT GGTTAATCATCCTC TTATTTGTTTTAAAA LSL_0361 394069 - 393233 - | hypothetical protein TERM 434 393444 - 393455 + g 76 -4.4 -5.03747 | CGATACAATGTACGT TTGG CACG CCAA TTTTTTCCGGGATTT LSL_0362 395178 - 394087 - | phosphoesterase, DHH family protein TERM 435 394147 - 394164 + g 83 -7.1 -4.67357 | ATCAAGATTATCAGC GAAAGTA CTGC TACTTTC TTCTTTTTCTTGCTT def 395602 - 395291 - | peptide deformylase LSL_0364 395701 - 396417 + | hypothetical protein TERM 436 396468 - 396418 - T 100 -13.8 -3.9693 | gap 1, opp_overlap 396423, overlap 396423 TATTTAGCTAAATAA TAAAATCCCTTATATTATGG-AG AAAAAA CTACCATGATATAAGGGATTTTA AGCTAGGAATGGAAA TERM 437 396463 - 396423 - T 95 -9.3 -5.011 | gap 1, opp_overlap 396423, overlap 396418 AGCTAAATAATAAAA TCCCTTATATTATGG-AG AAAAAA CTACCATGATATAAGGGA TTTTAAGCTAGGAAT TERM 438 396423 - 396463 + T 100 -11.5 -4.13945 | gap 1, opp_overlap 396418 396423 AGCTAAATAATAAAA TCCCTTATATTATGG-AG AAAAAA CTACCATGATATAAGGGA TTTTAAGCTAGGAAT LSL_0365 397395 - 396466 - | hypothetical protein LSL_0366 397556 - 397783 + | hypothetical protein TERM 439 397837 - 397796 - T 88 -6.9 -5.23316 | gap 1, opp_overlap 397796 TAGGATAGTAAAAAA GCATCTAC-CTATTAATC TATTTAT GATTAATAAAGCAGATGC TTTTTACTTGAAAAA LSL_0367 398419 - 397841 - | sigma-70 factor family protein recX 399291 - 398488 - | recombination regulator RecX trmA 399377 - 400756 + | tRNA (Uracil-5-) -methyltransferase LSL_0370 400884 - 401429 + | hypothetical protein TERM 440 401494 - 401468 - f 86 -7.3 -4.81083 | opp_overlap 401466 401464 401462 401468 TCTAAGGAGTAAAAA GAGGTTGCGAT GTTAT ATCACAGCCTC TCTCTTATTTAGCAA TERM 441 401468 - 401494 + F 71 -8 -3.34652 | opp_overlap 401468, overlap 401466 401464 401462 TCTAAGGAGTAAAAA GAGGTTGCGATG TTA TATCACAGCCTC TCTCTTATTTAGCAA LSL_0371 401530 - 402660 + | hypothetical protein TERM 442 403665 - 403650 - g 86 -2.6 -5.80364 | AGCTCAACAAAAAAA TATTGA AATG CCAATA ACTGAAGCTATCTAT gpsA 402745 - 403761 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 443 403771 - 403791 + F 84 -5.4 -5.37043 | AAATAATTATTTTTA GGTAGTCT GATTG GGGCTACC TTTTTTATATAAGCT TERM 444 404822 - 404800 - g 77 -3.5 -5.4148 | GAAAGAAGTAAAAAA TAACAATCT GAATA AGAATGTTA AAGGACATAAAAAGA tagH 403895 - 405337 + | teichoic acid translocation ATP-binding protein TERM 445 405346 - 405369 + F 78 -6.7 -4.41716 | opp_overlap 405346 TAATTAGAAATATAA GGGGTAGGT GTTGAA ACCTGCTCC TTTCTTATGTAGTAT TERM 446 405589 - 405577 - g 77 -3.3 -5.58209 | TTAAAGCTAAAAAAA GCGGA AAT TTCGC TAAGTCTGACTGGAT prfC 405426 - 407003 + | peptide chain release factor 3 TERM 447 407105 - 407069 - f 100 -16.2 -5.12707 | opp_overlap 407069 TCAAAGTTCAAAAAA CGTCAAAGATTAGATT TAAGT AACCTAATCTTTGACG TTTTTTAATTAAATT TERM 448 407069 - 407105 + F 100 -14 -5.29385 | opp_overlap 407069 TCAAAGTTCAAAAAA CGTCAAAGATTAGATT TAAGT AACCTAATCTTTGACG TTTTTTAATTAAATT LSL_0375 407319 - 408092 + | hypothetical protein TERM 449 408111 - 408146 + F 79 -7.1 -4.35461 | opp_overlap 408114, overlap 408114 TAATTATATTTTATG CAAGGTATTAACTTA GAGGAG TGAGTTAATACCTTA TTTTAATACTATTAA TERM 450 408114 - 408143 + F 87 -8.8 -4.28045 | opp_overlap 408114, overlap 408111 TTATATTTTATGCAA GGTATTAACTTA GAGGAG TGAGTTAATACC TTATTTTAATACTAT TERM 451 408536 - 408525 - g 82 -3 -5.63374 | TTAAGAGTAAAAAAA TTCT ATAA AGAA GATTTTAACGATAGT lacZ 408327 - 411350 + | Beta-galactosidase TERM 452 411360 - 411387 + T 100 -10 -5.52384 | opp_overlap 411358 411360 ATTTAACAAAATAGA GTCTCGTATTTC TTAT GAAGTATGAGAC TTTTTTTGATACAAA TERM 453 411940 - 411981 + T 84 -6.1 -5.19275 | gap 1, opp_overlap 411953, overlap 411943 GTGGTTGTATAATAT TTAGGACTGATAATGTAAAA TTT TTTTACATTA-CGGTCCTTC TTTTATTTTCTCCAT TERM 454 411943 - 411978 + T 100 -12.2 -4.66746 | gap 1, opp_overlap 411953, overlap 411940 GTTGTATAATATTTA GGACTGATAATGTAAAA TTT TTTTACATTA-CGGTCC TTCTTTTATTTTCTC TERM 455 412147 - 412127 - T 84 -9.9 -3.38522 | overlap 412125 412131 TATTGACCCTAAATA TCAATATAC TTC GTATATTGA AGAAAAAATTATTAA TERM 456 412675 - 412665 - T 71 -5.4 -4.71584 | opp_overlap 412665 GAAAGAAATAATAAA TTCC TTA GGAA TTATTTCATTCAATA TERM 457 413382 - 413361 - T 100 -6.7 -5.80951 | opp_overlap 413361 ACTTAAAACAAAAAA CTATTAGAC TTTC ATCTAATAG TTTGAAAATAATAAT TERM 458 415018 - 415041 + T 100 -12.6 -5.61596 | opp_overlap 415018 GAGATTAATTAAAAA GTATGAGTTC GATT GAACTCATAC TTTTTTTGTGAAGAT TERM 459 415041 - 415018 - T 100 -12.6 -4.91873 | opp_overlap 415018 GAGATTAATTAAAAA GTATGAGTTC GATT GAACTCATAC TTTTTTTGTGAAGAT galR 416061 - 415063 - | galactose operon repressor galK 416233 - 417396 + | galactokinase TERM 460 417749 - 417763 + G 72 -2.9 -5.21709 | TAATGAATGAATTTT CAATT GATAA AATTG TTTTTTCATCTACAG galE 417424 - 418419 + | UDP-glucose 4-epimerase LSL_0383 418438 - 419925 + | galactose-1-phosphate uridylyltransferase TERM 461 420767 - 420755 - T 80 -6.3 -4.81249 | TTTGAAATTGAAAAA GATCA ACT TGATC AAGTTCGGTTATTAG TERM 462 421828 - 421815 - T 70 -3.9 -5.06961 | ACGAAGAAAAAGAAA TTGTT AAAA AACAA GTAAATCAATACAAG TERM 463 422191 - 422162 - T 100 -11.7 -6.08342 | gap 1, opp_overlap 422162 GAATAAATAAAAAAA GAGATGTAAGTTGA ATT TCAACT-ACATCTC TTTTTAAAATTGTAG TERM 464 422162 - 422191 + T 100 -11.7 -4.6902 | gap 1, opp_overlap 422162 GAATAAATAAAAAAA GAGATGTAAGTTGA ATT TCAACT-ACATCTC TTTTTAAAATTGTAG LSL_0384 423235 - 422195 - | hypothetical protein LSL_0385 423659 - 423384 - | hypothetical protein TERM 465 423776 - 423755 - R 100 -10.3 -5.77632 | opp_overlap 423759 AAAAGCATAAAAAAA GAGAGTTAA AAAA TTAACTCTC TCAAAAAATTAGTCT clpE 425977 - 423785 - | ATP-dependent Clp protease ATP-binding subunit TERM 466 424852 - 424836 - G 71 -6.6 -4.08767 | TTCATCTTTTCAAAA CGTGAT ACTTG ATCACG ATAGTAAGCAGCTTT TERM 467 425718 - 425746 + g 73 -8.2 -3.62775 | CGATTACCGTTATTT CCACCTATGCGA CTATT TTGTGTAGGTGG TTCTTGAGACATGCT LSL_0387 426126 - 426320 + | hypothetical protein ptsH 426579 - 426845 + | phosphocarrier protein HPr TERM 468 428094 - 428081 - g 70 -2.4 -5.29445 | TTTGAAGAAGAAAAA GCAA AACTTG TTGC AGATGGTGTTCCAGT ptsI 426845 - 428566 + | phosphoenolpyruvate-protein phosphotransferase TERM 469 428589 - 428615 + F 100 -10.9 -5.42514 | opp_overlap 428588 428589 TAATTTATATGAAAG GCTTGAGAGGG GAATA CCTTCTCGAGC TTTTTTGATTTGTAA rfaG 428743 - 429942 + | glycosyltransferase TERM 470 430356 - 430369 + G 77 -5.3 -4.89393 | TATATACCTAATTTT GTATC CAGT GATAC TTTTTATAAAATTTC rfaG 429945 - 430955 + | glycosyltransferase LSL_0392 430960 - 431979 + | hypothetical protein TERM 471 432029 - 432051 + F 74 -8.6 -3.2006 | opp_overlap 432033, overlap 432033 AATGTAAAAATATGG TAAACATGAT ATT ATCATGTTTG TATATTATAAGTATT TERM 472 432033 - 432047 + F 76 -7.2 -4.24786 | opp_overlap 432033, overlap 432029 TAAAAATATGGTAAA CATGAT ATT ATCATG TTTGTATATTATAAG TERM 473 432047 - 432033 - f 70 -7.2 -3.73294 | opp_overlap 432033 432029 TAAAAATATGGTAAA CATGAT ATT ATCATG TTTGTATATTATAAG LSL_0393 432107 - 432340 + | hypothetical protein LSL_0394 432452 - 434521 + | sulfatase family protein TERM 474 434528 - 434561 + F 100 -12 -5.60993 | opp_overlap 434519 434528 GAGAAATAATATAAA TACTGTTAAGTGTC GTAAGA GATACTTAACAGTA TTTTTTTGTAAAAAA TERM 475 434561 - 434528 - f 91 -9.8 -4.42743 | opp_overlap 434528, overlap 434519 GAGAAATAATATAAA TACTGTTAAGTGTC GTAAGA GATACTTAACAGTA TTTTTTTGTAAAAAA TERM 476 434757 - 434745 - f 76 -6.3 -4.67692 | overlap 434736 TGAAAACTAAACAAA GTTTC GAT GAAAC AAATGTGCAGGGCTT TERM 477 436383 - 436364 - f 72 -9.2 -2.65808 | opp_overlap 436367 436370, overlap 436361 436376 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 478 436564 - 436580 + F 83 -6.7 -4.77165 | overlap 436562 436568 TTTAGGCCCATTCTT TTATGAA AAT TTCATAA TTTTCTTATGGGGCC TERM 479 436659 - 436686 + F 70 -4.2 -5.00196 | overlap 436661 436663 436680 TCGATCCCGCTAGGC TCCATTGATAAC GAAA GTTATCAAATGA TTTTGTTCTTTGAAA TERM 480 437114 - 437095 - f 82 -9.4 -3.66803 | opp_overlap 437094 437093 CGGGAAGAGCCCAAA CTAAGAAG CTTG CTTCTTAG GGTTGTAGGACTGAA TERM 481 441000 - 441022 + F 100 -7.1 -5.87996 | GGTATCTGTGTTTAA GTCTTAGTT TTTAT AACTAAGGC TTTTTTTGTTACTTG pckA 441138 - 442784 + | phosphoenolpyruvate carboxykinase [ATP] TERM 482 443383 - 443399 + G 70 -4.5 -4.72029 | opp_overlap 443383, overlap 443378 443385 GTGTTTGTAGTAGAA TTTTCAA CAT TTGAAGA TTTTGTTCAATTAGC LSL_0396 442888 - 443649 + | adaptor protein TERM 483 443661 - 443693 + F 72 -3.5 -5.24989 | gap 1, overlap 443663 ATAAGTTAAATAAAA TCCCTTTCTTGCGT ATTTTC ACGTAGGAG-GGGA TTTTTTGATATATGC LSL_0397 443698 - 444597 + | putative competence protein/transcription factor LSL_0398 444695 - 446512 + | oligoendopeptidase F TERM 484 446527 - 446559 + T 100 -11.5 -5.89921 | opp_overlap 446527 AATATAAATAAAAAA GATTGGAGATCATTA ATT TAATGATTACCAATC TTTTTTTGTTATAGT TERM 485 446559 - 446527 - T 100 -9.3 -5.7827 | opp_overlap 446527 AATATAAATAAAAAA GATTGGAGATCATTA ATT TAATGATTACCAATC TTTTTTTGTTATAGT LSL_0399 447207 - 446602 - | hypothetical protein TERM 486 447272 - 447282 + H 77 -4 -5.32699 | AAATAAATGAAATTT CAAA GAT TTTG TTTTTTCGTCTTTAC TERM 487 447465 - 447449 - g 91 -4.5 -5.95166 | opp_overlap 447449, overlap 447463 TGCAAGTAAAAAAAA CAATAAT ATA ACTATTG TTGGTTCAACAGCAA pstS 447375 - 448229 + | phosphate-binding protein pstC 448240 - 449157 + | phosphate ABC transporter permease pstA 449157 - 450047 + | phosphate ABC transporter permease pstB 450052 - 450846 + | phosphate ABC transporter ATP-binding protein pstB 450856 - 451611 + | phosphate ABC transporter ATP-binding protein phoU 451624 - 452280 + | phosphate transporter PhoU fba 452407 - 453273 + | fructose-bisphosphate aldolase TERM 488 453341 - 453362 + T 100 -6.7 -6.55664 | opp_overlap 453341 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTTTTGTTTTA LSL_0407 454664 - 453375 - | ISL3 family transposase TERM 489 454051 - 454061 + g 74 -5.4 -4.71584 | opp_overlap 454051 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 490 454401 - 454412 + g 70 -4.4 -4.77165 | opp_overlap 454401 454407, overlap 454406 454407 CTTGCATTCAGGACA CAGA TACT TCTG TTTTCTTATAGAAAG TERM 491 454579 - 454599 + g 81 -9.9 -3.38522 | overlap 454578 454583 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA TERM 492 454809 - 454826 + G 86 -4.8 -5.75478 | opp_overlap 454809 ACCACTTTTTTTAAA GAGTCG CTTATA CGGCTC TTTTTTTATATGCTT LSL_0408 454692 - 454895 + | hypothetical protein LSL_0409 454914 - 455606 + | hypothetical protein TERM 493 455937 - 455917 - g 73 -8.5 -3.19568 | opp_overlap 455920, overlap 455916 455920 CTACTCAGAACAAAT TAATATTGT TAA ACAATATTA TCAAAATAAAGGAGT LSL_0410 455624 - 456313 + | hypothetical protein TERM 494 456313 - 456366 + T 100 -11.4 -5.31275 | opp_overlap 456318, overlap 456318 TGGACAATTAATTTA AAAAAGATGTCATAATCAATTATC AGTAAA GATTTTTGATTATGACATCTTTTA TTTTTTATAATAAGA TERM 495 456361 - 456318 - T 100 -11.3 -5.1848 | opp_overlap 456313 456318 AATTAATTTAAAAAA GATGTCATAATCAATTATC AGTAAA GATTTTTGATTATGACATC TTTTATTTTTTATAA TERM 496 456318 - 456361 + T 100 -11.3 -5.49579 | opp_overlap 456318, overlap 456313 AATTAATTTAAAAAA GATGTCATAATCAATTATC AGTAAA GATTTTTGATTATGACATC TTTTATTTTTTATAA LSL_0411 456977 - 456624 - | hypothetical protein LSL_0412 457041 - 457640 + | hypothetical protein LSL_0413 457759 - 458094 + | ArsR family transcriptional regulator TERM 497 458215 - 458236 + T 100 -6.7 -6.55664 | opp_overlap 458215 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTTTTGTTTTA LSL_0414 459538 - 458249 - | ISL3 family transposase TERM 498 458925 - 458935 + g 74 -5.4 -4.71584 | opp_overlap 458925 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 499 459275 - 459286 + g 70 -4.4 -4.77165 | opp_overlap 459275 459281, overlap 459280 459281 CTTGCATTCAGGACA CAGA TACT TCTG TTTTCTTATAGAAAG TERM 500 459453 - 459473 + g 81 -9.9 -3.38522 | overlap 459452 459457 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA rnhA 459722 - 460381 + | ribonuclease HI LSL_0416 460896 - 460738 - | hypothetical protein TERM 501 460869 - 460905 + g 76 -4.6 -5.07567 | gap 1 TTGAAATATCATCAA GGTACTGAATTAGATTT TTTA AAGTC-ATTTCAGTGCC TTTTTTGACATCTAA TERM 502 461072 - 461055 - H 72 -5.7 -4.45485 | opp_overlap 461041 461057, overlap 461041 ACTATATTGATAAAA TAGATAT TTTT ATATCTA TTCGGATAACGCTTT TERM 503 461635 - 461619 - g 74 -5.9 -4.56775 | overlap 461620 ATGGTCTTGTAAAAA CTTCAAC AAT GTTGAAA AATGGATTAAGAGCA LSL_0417 461276 - 461683 + | hypothetical protein LSL_0418 461706 - 462155 + | hypothetical protein TERM 504 462208 - 462152 - T 100 -20.1 -3.54146 | opp_overlap 462153 462156 462168, overlap 462153 462156 462168 AACATCTGAAACGAA GTAATTATAATAAAAACCACTCAAATA AAA TAATTGAGTGGTTTTTATTATAATTAT TGTTTAATGTTATTA TERM 505 462207 - 462153 - T 100 -23.6 -2.71765 | opp_overlap 462153 462156 462168, overlap 462152 462156 462168 ACATCTGAAACGAAG TAATTATAATAAAAACCACTCAAATA AAA TAATTGAGTGGTTTTTATTATAATTA TTGTTTAATGTTATT TERM 506 462153 - 462207 + T 100 -23.6 -4.11363 | opp_overlap 462153 462152 462156 462168, overlap 462156 462168 ACATCTGAAACGAAG TAATTATAATAAAAACCACTCAAATA AAA TAATTGAGTGGTTTTTATTATAATTA TTGTTTAATGTTATT TERM 507 462204 - 462156 - T 100 -20.9 -3.5013 | opp_overlap 462153 462156 462168, overlap 462153 462152 462168 TCTGAAACGAAGTAA TTATAATAAAAACCACTCAAATA AAA TAATTGAGTGGTTTTTATTATAA TTATTGTTTAATGTT TERM 508 462156 - 462204 + T 100 -20.9 -4.15114 | opp_overlap 462156 462153 462152 462168, overlap 462153 462168 TCTGAAACGAAGTAA TTATAATAAAAACCACTCAAATA AAA TAATTGAGTGGTTTTTATTATAA TTATTGTTTAATGTT TERM 509 462192 - 462168 - T 100 -10.1 -5.24416 | opp_overlap 462156 462153 462168, overlap 462156 462153 462152 TAATTATAATAAAAA CCACTCAAATA AAA TAATTGAGTGG TTTTTATTATAATTA TERM 510 462168 - 462192 + T 100 -10.1 -5.24416 | opp_overlap 462168 462156 462153 462152, overlap 462156 462153 TAATTATAATAAAAA CCACTCAAATA AAA TAATTGAGTGG TTTTTATTATAATTA pepQ 463329 - 462226 - | Xaa-Pro aminopeptidase TERM 511 462370 - 462383 + g 77 -5.3 -4.99947 | AGAGAAACACATACC TGGAA CTAA TTCCA TTTTATTTCCTTCCA TERM 512 463393 - 463383 - H 79 -2.6 -5.73978 | ATTAGAAAGAAAAAA TTTA ATA TAAA ATAAGCAATTATGAA TERM 513 463728 - 463717 - g 70 -4.4 -4.78572 | TGGCAAGTAAGAAAA CAAC AACT GTTG GAGTTATTATTCCAG TERM 514 464484 - 464473 - g 70 -4.4 -4.67968 | TGAACAAAGAAGAAA CATC AGCT GATG AAAAAACTATTGAAC ccpA 463530 - 464537 + | catabolite control protein A TERM 515 464553 - 464575 + F 100 -7.1 -5.66989 | opp_overlap 464553 TTAGAAGTATAGAAG CTAATCGAG TATAT CTTGATTAG TTTTTTTAATATTTA LSL_0421 464631 - 465119 + | hypothetical protein LSL_0422 465226 - 465954 + | hypothetical protein TERM 516 466852 - 466874 + G 100 -12.2 -4.17089 | overlap 466816 ACATTTATCGGTGCT CTAGTATCTA AAT TAGATACTAG TTTTAGCAATTTAAG rbsK 466078 - 467001 + | ribokinase TERM 517 467015 - 467048 + F 100 -11.3 -5.78622 | opp_overlap 467015 AGAAAGCAATATGAA TTCCTATAGAACGAA AAAA TTTGTTTTATAGGAA TTTTTTTTAGAATAA TERM 518 467051 - 467067 + F 77 -3.1 -5.54264 | overlap 467052 TGTTTTATAGGAATT TTTTTTA GAA TAAAAAG TTTTTTTGCGTATTT TERM 519 467374 - 467353 - gf 75 -2.4 -5.53991 | gap 1, overlap 467357 TAGCGATGAAAAAAA TGA-AGTCT TTTGT AGACTATCA AGTGTAGGAGATTTT LSL_0424 467105 - 468088 + | ComG operon protein 1 LSL_0425 468024 - 469097 + | ComG operon protein 2 TERM 520 469347 - 469333 - g 73 -7.2 -3.98745 | TAATTATTTAAATAA TGATCA ATA TGATCA AATTAAGAAGAAAAA LSL_0426 469097 - 469399 + | ComG operon protein 3 LSL_0427 469401 - 469823 + | hypothetical protein LSL_0428 469804 - 470058 + | hypothetical protein LSL_0429 470024 - 470194 + | hypothetical protein LSL_0430 470228 - 470488 + | hypothetical protein TERM 521 470500 - 470486 - g 76 -2.9 -5.47821 | ATGGATCGAAAAAAA TGAAA AGTAG TTTCA GAAAAGAAGGTTATT LSL_0431 470485 - 470766 + | hypothetical protein LSL_0432 470841 - 471881 + | adenine-specific methyltransferase TERM 522 471910 - 471931 + F 100 -6.7 -5.80951 | opp_overlap 471910 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTGTTTTAAGT TERM 523 472617 - 472627 + F 71 -5.4 -4.71584 | opp_overlap 472617 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 524 473145 - 473165 + F 84 -9.9 -3.38522 | overlap 473144 473149 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA TERM 525 473352 - 473311 - f 84 -6.1 -5.19275 | gap 1, opp_overlap 473323, overlap 473314 ATGGAGAAAATAAAA GAAGGACCG-TAATGTAAAA AAA TTTTACATTATCAGTCCTAA ATATTATACAACCTT TERM 526 473349 - 473314 - f 100 -12.2 -4.66746 | gap 1, opp_overlap 473323, overlap 473311 GAGAAAATAAAAGAA GGACCG-TAATGTAAAA AAA TTTTACATTATCAGTCC TAAATATTATACAAC TERM 527 473417 - 473382 - f 76 -3.4 -5.37345 | opp_overlap 473383, overlap 473364 473383 TTTAATTAGAAAAAA GGAACTATAATTTCAA TAAT TTGGATTTATAGTTCT TTTTTTATCTAAAAG TERM 528 473383 - 473416 + F 100 -9.1 -5.71712 | opp_overlap 473383 473382 TTAATTAGAAAAAAG GAACTATAATTTCAA TAAT TTGGATTTATAGTTC TTTTTTTATCTAAAA LSL_0433 473536 - 474894 + | amino acid permease TERM 529 474902 - 474936 + F 100 -10.3 -6.37666 | opp_overlap 474907 GAAAATAGAGTTCAA CAGAATTAGAGATAC GCTAA GTATTTTTAATTCTG TTTTTTTTATTTTAT LSL_0434 474993 - 475598 + | phosphoesterase LSL_0435 475676 - 476260 + | hypothetical protein nagD 476271 - 477044 + | N-acetylglucosamine catabolic protein TERM 530 477069 - 477103 + G 79 -3.7 -5.53436 | opp_overlap 477071 CTATATGGATAGAAA GAGTAATATTACTAC TATTT GGCGTAATATTATTC TTTTTTGTATTATCT LSL_0437 477044 - 477688 + | hypothetical protein TERM 531 477717 - 477750 + T 100 -11.9 -5.60864 | gap 1, opp_overlap 477717 TTGTACAGTAAAAAA CGGATAGT-GAATCCA TTT TGGAATCTACTATCCG TTTTTTTAGTATATA TERM 532 477750 - 477717 - T 100 -11.9 -5.21709 | gap 1, opp_overlap 477717 TTGTACAGTAAAAAA CGGATAGT-GAATCCA TTT TGGAATCTACTATCCG TTTTTTTAGTATATA dedA 478420 - 477779 - | DedA family protein TERM 533 477909 - 477899 - G 74 -3.2 -5.2112 | AATATTACCAAAAAA GTAC CCA GCAC CACAACAAATGAGAA TERM 534 478492 - 478473 - R 93 -6.6 -5.40625 | opp_overlap 478473 478472 ATACCATATAAAAAA GAAAATAA TTAG TTATTTTC ATTATTTTTAATATT trxB 479506 - 478481 - | thioredoxin reductase LSL_0440 479626 - 480036 + | polyribonucleotide nucleotidyltransferase TERM 535 480287 - 480275 - f 76 -6.3 -4.67692 | overlap 480266 TGAAAACTAAACAAA GTTTC GAT GAAAC AAATGTGCAGGGCTT TERM 536 480552 - 480594 + F 71 -7.9 -3.48689 | gap 1, opp_overlap 480552 AAACAGGTGCTAATA CCGTATATC-TCTAAGGATC GCAT GATCCTTAGATGAAAGATGG TTCTGCTATCGCTTT TERM 537 481912 - 481893 - f 72 -9.2 -2.65808 | opp_overlap 481896 481899, overlap 481890 481905 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 538 481976 - 482000 + F 95 -8.7 -5.00196 | overlap 481978 GGATACTTTGTTTAG TTTTGAGAGGT CAT ATCTCTCAAGA TTTTGTTCTTTGAAA TERM 539 481978 - 481998 + F 72 -9.1 -2.74335 | overlap 481976 ATACTTTGTTTAGTT TTGAGAGGT CAT ATCTCTCAA GATTTTGTTCTTTGA TERM 540 482428 - 482409 - f 82 -9.4 -3.66803 | opp_overlap 482408 482407 CGGGAAGAGCCCAAA CTAAGAAG CTCG CTTCTTAG GGTTGTAGGACTGAA TERM 541 486963 - 486980 + F 100 -8.5 -5.83226 | opp_overlap 486966 GACTAATTTTTTTAA CTATCCT TTTT AGGATAG TTTTTTTATTACATT metK 487146 - 488336 + | S-adenosylmethionine synthetase TERM 542 488587 - 488618 + F 100 -9.6 -5.71712 | overlap 488582 488588 ACCGCGAGTTTTTCG TCCTATACGGAATA GTTT TATTTCGTATAGGC TTTTTTTATCTACAG TERM 543 488588 - 488617 + F 100 -13.1 -4.01943 | overlap 488582 488587 CCGCGAGTTTTTCGT CCTATACGGAATA GTTT TATTTCGTATAGG CTTTTTTTATCTACA leuS 488667 - 491084 + | leucyl-tRNA synthetase TERM 544 491110 - 491135 + F 100 -7.7 -5.58179 | opp_overlap 491110 TTAGTATTATTAAAA GATTCGTATTT CATG AGATGCGAATC TTTTTTATTATAGTC LSL_0443 491324 - 492661 + | amino acid permease TERM 545 492670 - 492694 + F 80 -5.7 -5.12617 | opp_overlap 492670 AAAATAATTTATAAA GCTGGTTAGAA TTA TCCTAACTGGC TTTTTTAAATGCTTA TERM 546 492834 - 492813 - g 89 -8.9 -4.6372 | opp_overlap 492817, overlap 492824 492825 ACAAATAAAAAAAGA TTTAGAAGA AACT TCTTCTAAA GAAAAAATGTTGAAA LSL_0444 492781 - 494427 + | export protein for polysaccharides and teichoic acids rsuA 494432 - 495154 + | ribosomal small subunit pseudouridine synthase A TERM 547 495192 - 495147 - T 100 -12.9 -3.35072 | gap 1, opp_overlap 495152 495185, overlap 495152 AAGAATTAAATTTAA TAAAATAAGGAGAAGAGGACTA AAT TTGTCC-CTTCTCCTTATTTTT GTTCAGAAATAACTT TERM 548 495152 - 495187 + T 100 -12.8 -5.06816 | gap 1, opp_overlap 495152 495147, overlap 495185 TTAAATTTAATAAAA TAAGGAGAAGAGGACTA AAT TTGTCC-CTTCTCCTTA TTTTTGTTCAGAAAT TERM 549 495187 - 495152 - T 100 -12.8 -4.75309 | gap 1, opp_overlap 495152 495185, overlap 495147 TTAAATTTAATAAAA TAAGGAGAAGAGGACTA AAT TTGTCC-CTTCTCCTTA TTTTTGTTCAGAAAT LSL_0446 496036 - 495185 - | sugar kinase TERM 550 495513 - 495525 + g 72 -4.9 -4.65722 | GTTTGTTTTTGTAAG TTGAT GTC ATCAA TTTGTTTATCTATAG TERM 551 496656 - 496666 + G 71 -5.4 -4.57569 | opp_overlap 496664 GAAAAAATGCCTAAG CCAA CAA TTGG TTTTTCACCAGATGC LSL_0447 496152 - 497561 + | Xaa-His dipeptidase TERM 552 497564 - 497609 + T 75 -9.4 -2.89564 | opp_overlap 497572, overlap 497572 AATTAAAGACTAATT TAAGAGAACTTCAAAATAGT AGTTTG GCTATTTTGAAGTTTTTTTG TGTATAAGATAGGGA TERM 553 497601 - 497572 - T 75 -8.1 -3.72087 | opp_overlap 497572 497564 ACTAATTTAAGAGAA CTTCAAAATAG TAGTTTGG CTATTTTGAAG TTTTTTTGTGTATAA TERM 554 497572 - 497601 + T 100 -8.8 -5.76633 | opp_overlap 497572, overlap 497564 ACTAATTTAAGAGAA CTTCAAAATAGT AGTTTG GCTATTTTGAAG TTTTTTTGTGTATAA TERM 555 497671 - 497692 + T 100 -10.9 -4.57569 | opp_overlap 497671 TAGAGATAAAATAAA CTCCACTCA TAAT TGGGTGGAG TTTTTAAGCCAGTCA TERM 556 497692 - 497671 - T 93 -8.7 -4.85653 | opp_overlap 497671 TAGAGATAAAATAAA CTCCACTCA TAAT TGGGTGGAG TTTTTAAGCCAGTCA TERM 557 497710 - 497738 + T 78 -9.7 -3.31269 | overlap 497711 TTTAAGCCAGTCATT TGATGCTGCATAT ATA ATATACAGCATCG TTAATATAGTGTCAC TERM 558 497711 - 497737 + T 82 -11 -2.5844 | overlap 497710 TTAAGCCAGTCATTT GATGCTGCATAT ATA ATATACAGCATC GTTAATATAGTGTCA LSL_0448 498273 - 497989 - | hypothetical protein TERM 559 498494 - 498530 + H 100 -10.6 -5.18371 | gap 1, opp_overlap 498499 498516, overlap 498499 498503 ACTATTTTAATAGCA TATAATGGATATTTTGA GAAA TCAAAATATCCATT-TA TTTTGTTTTGTAAAA TERM 560 498499 - 498526 + H 100 -13 -5.06411 | opp_overlap 498499 498516, overlap 498494 498503 TTTAATAGCATATAA TGGATATTTTGA GAAA TCAAAATATCCA TTTATTTTGTTTTGT TERM 561 498526 - 498499 - H 100 -13 -3.60348 | opp_overlap 498494 498499 498503, overlap 498516 TTTAATAGCATATAA TGGATATTTTGA GAAA TCAAAATATCCA TTTATTTTGTTTTGT fabA 498676 - 499122 + | (3R)-hydroxyacyl-[acyl carrier protein] dehydratase LSL_0450 499199 - 499639 + | MarR family transcriptional regulator fabH 499656 - 500636 + | 3-oxoacyl-[acyl-carrier-protein] synthase III acpP 500656 - 500898 + | Acyl carrier protein fabD 500912 - 501850 + | malonyl-CoA-[acyl-carrier-protein] transacylase fabG 501851 - 502582 + | 3-ketoacyl-(acyl-carrier-protein) reductase fabB 502595 - 503833 + | 3-oxoacyl-[acyl-carrier-protein] synthase accB 503836 - 504285 + | biotin carboxyl carrier protein of acetyl-CoA carboxylase fabA 504290 - 504712 + | (3R)-hydroxyacyl-[acyl carrier protein] dehydratase accC 504737 - 506116 + | biotin carboxylase accD 506103 - 506954 + | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta accA 506955 - 507743 + | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha fabI 507759 - 508517 + | enoyl-(acyl carrier protein) reductase TERM 562 508525 - 508549 + F 100 -12.3 -5.29782 | opp_overlap 508525 TAATATAGTTAAAAA GTTGGAAGAGA GAG TCTCTTTCAAC TTTTTTATAAATATG TERM 563 508549 - 508525 - f 100 -10.1 -4.74453 | opp_overlap 508525 TAATATAGTTAAAAA GTTGGAAGAGA GAG TCTCTTTCAAC TTTTTTATAAATATG TERM 564 508745 - 508773 + G 75 -4.7 -4.99043 | opp_overlap 508744 CAAAGAAAATTATAC CCTTCTTTATTTA ATT TATATAAAAAAGG TTTTCTTTGTAAAAG zwf 508664 - 510148 + | glucose-6-phosphate 1-dehydrogenase TERM 565 510197 - 510169 - T 100 -13.3 -5.65927 | opp_overlap 510169 TAGTTAAACAAAAAA TCACAGTTCTGAA AGA TTCAGAGCTGTGA TTTTTATTGGTTGTA TERM 566 510169 - 510197 + T 100 -15.5 -5.2204 | opp_overlap 510169 TAGTTAAACAAAAAA TCACAGTTCTGAA AGA TTCAGAGCTGTGA TTTTTATTGGTTGTA TERM 567 510219 - 510260 + T 84 -6.1 -5.19275 | gap 1, opp_overlap 510232, overlap 510222 TTGGTTGTATAATAT TTAGGACTGATAATGTAAAA TTT TTTTACATTA-CGGTCCTTC TTTTATTTTCTCCAT TERM 568 510222 - 510257 + T 100 -12.2 -4.66746 | gap 1, opp_overlap 510232, overlap 510219 GTTGTATAATATTTA GGACTGATAATGTAAAA TTT TTTTACATTA-CGGTCC TTCTTTTATTTTCTC TERM 569 510426 - 510406 - T 84 -9.9 -3.38522 | overlap 510404 510410 TATTGACCCTAAATA TCAATATAC TTC GTATATTGA AGAAAAAATTATTAA TERM 570 510954 - 510944 - T 71 -5.4 -4.71584 | opp_overlap 510944 GAAAGAAATAATAAA TTCC TTA GGAA TTATTTCATTCAATA TERM 571 511661 - 511640 - T 100 -6.7 -5.80951 | opp_overlap 511640 ACTTAAAACAAAAAA CTATTAGAC TTTC ATCTAATAG TTTGAAAATAATAAT pgi 513084 - 511732 - | glucose-6-phosphate isomerase LSL_0465 513311 - 515494 + | sulfatase family protein TERM 572 515544 - 515512 - T 88 -6.6 -5.25656 | gap 2, opp_overlap 515512 AAAATGATGAAAAAA CCAGTAAAG-A-AGTA AGT TACTATCCTTTACTGG TTTTTTGATAATAAA TERM 573 515512 - 515544 + T 88 -6.6 -5.1861 | gap 2, opp_overlap 515512 AAAATGATGAAAAAA CCAGTAAAG-A-AGTA AGT TACTATCCTTTACTGG TTTTTTGATAATAAA TERM 574 515592 - 515563 - T 100 -10.2 -5.55769 | opp_overlap 515563, overlap 515556 TTTGATAATAAAAAA GCTAACCTTTCT ATAATA AGAAAAGTTAGC TATAGTTCAGACATT glpF 516343 - 515606 - | glycerol uptake facilitator protein LSL_0467 516557 - 517021 + | CBS domain-containing protein LSL_0468 517047 - 517751 + | tetrahydrodipicolinate N-acetyltransferase TERM 575 517763 - 517789 + F 100 -8.9 -5.72622 | opp_overlap 517762 517763 517765 ATAATTAATAAAGAG CATGTGAAATA TAAGT TGTTTCACATG TTTTTTGTTTATAGG LSL_0469 517868 - 519013 + | N-acetyldiaminopimelate deacetylase TERM 576 519093 - 519047 - T 100 -10.5 -4.87665 | gap 1, opp_overlap 519049, overlap 519049 TTTCATTCATAAAAA TATACCCCGTAGTTACTTAGAT TTTT ATCTAA-TAATTACGGGGTATT TGCTATATATAATTG TERM 577 519049 - 519091 + T 100 -15.3 -3.91597 | gap 1, opp_overlap 519047 519049 TCATTCATAAAAATA TACCCCGTAGTTACTTAGAT TTTT ATCTAA-TAATTACGGGGTA TTTGCTATATATAAT TERM 578 519091 - 519049 - T 100 -13.1 -4.06182 | gap 1, opp_overlap 519049, overlap 519047 TCATTCATAAAAATA TACCCCGTAGTTACTTAGAT TTTT ATCTAA-TAATTACGGGGTA TTTGCTATATATAAT LSL_0470 520000 - 519110 - | mechanosensitive ion channel TERM 579 519941 - 519958 + g 77 -4.9 -5.19212 | opp_overlap 519941, overlap 519946 ATACTTTTTGAAAAT GTTAGTA TCAG TGCTAAC TTTTTTAGTAATGAT LSL_0471 520190 - 520855 + | Crp family transcriptional regulator mrcA 520935 - 523079 + | multimodular transpeptidase-transglycosylase PBP 2A LSL_0473 523125 - 523469 + | hypothetical protein TERM 580 523477 - 523510 + F 77 -3.8 -5.46706 | opp_overlap 523477 AAGGTTAAGATTTAA CTCCCATGGAAGCA CAGAGT TGCTTAACTGGGAG TTTTTATTTTAAAAT LSL_0474 523562 - 524509 + | CMP-binding factor TERM 581 524543 - 524579 + T 77 -8.2 -3.82202 | gap 1, opp_overlap 524526 524529 524548, overlap 524548 ATTTTATTAGAAAAT AAAAAGGCACATAGTCG AAAT TGACT-TGTGCCTTTTG TTCTATTTAGAACTA TERM 582 524548 - 524574 + T 91 -8.1 -4.95302 | gap 1, opp_overlap 524548, overlap 524543 ATTAGAAAATAAAAA GGCACATAGTCG AAAT TGACT-TGTGCC TTTTGTTCTATTTAG TERM 583 524574 - 524548 - T 100 -7.4 -5.56263 | gap 1, opp_overlap 524543 524548 ATTAGAAAATAAAAA GGCACATAGTC GAAATT GACT-TGTGCC TTTTGTTCTATTTAG prsA 525472 - 524582 - | peptidylprolyl isomerase LSL_0476 525870 - 525592 - | hypothetical protein LSL_0477 526302 - 525874 - | bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) LSL_0478 526423 - 527163 + | ABC transporter, ATP-binding protein LSL_0479 527156 - 528349 + | protein ecsB LSL_0480 528412 - 529200 + | phosphotransferase family protein TERM 584 529217 - 529249 + F 82 -5 -5.49579 | gap 1 ATGTAGAATTGTTGA GATAGAGGAAGTTAG TACA TTAACC-CCTCTATC TTTTATTTTTTGTAG TERM 585 529906 - 529879 - g 77 -4.8 -5.19261 | opp_overlap 529879 529897, overlap 529897 AAATTTAGTAAAAAA GGGCAACCAATT TTTA AATTAGAAGCCC ATTTCTAAGTTGATA LSL_0481 529276 - 529914 + | tRNA (m(7)G46) methyltransferase LSL_0482 530289 - 529897 - | hypothetical protein trxA 530363 - 530680 + | thioredoxin LSL_0484 530707 - 531357 + | tRNA-binding domain-containing protein TERM 586 531371 - 531408 + F 88 -6.6 -5.24129 | gap 1, opp_overlap 531371, overlap 531373 AATAATATGATAGAA TGGGCTAGTA-TTCAAA TTTAT TTTGAAATATTAGCCTA TTTTTTATAGGAAAA TERM 587 531373 - 531406 + F 74 -7 -4.25873 | gap 1, opp_overlap 531371, overlap 531371 TAATATGATAGAATG GGCTAGTA-TTCAAA TTTAT TTTGAAATATTAGCC TATTTTTTATAGGAA murC 533809 - 535140 + | UDP-N-acetylmuramate--L-alanine ligase maoC 535249 - 535689 + | dehydrogenase LSL_0487 535711 - 536424 + | integral membrane protein TERM 588 536432 - 536453 + F 100 -10.9 -5.99154 | AAGATTAATATTTCA GGCTTGGGA TTTT TCCCAAGTC TTTTTTTATTTAATA TERM 589 537666 - 537652 - g 84 -3.6 -5.68438 | TTACTAAAGAAAAAA CAAATC AAG AATTTG TTGGAATCTGATGAA polA 536545 - 539223 + | DNA polymerase I nei 539236 - 540066 + | formamidopyrimidine-DNA glycosylase coaE 540063 - 540668 + | dephospho-CoA kinase LSL_0491 540683 - 541156 + | transcriptional regulator NrdR TERM 590 541378 - 541399 + G 80 -9.5 -3.54653 | GAATATTATAGATGG CTTAGGGAT AAGT ATCCCTGAG TTATATGATGCACGT TERM 591 542305 - 542293 - g 93 -5.5 -6.12458 | GAAAAAAATAAAAAA CGCTC AAG AAGCG ATGACTTACGTTAAA dnaB 541166 - 542512 + | chromosome replication initiation / membrane attachment protein dnaI 542522 - 543451 + | primosomal protein DnaI TERM 592 543684 - 543725 + F 100 -14.7 -4.49556 | opp_overlap 543686, overlap 543678 GTGGAACCACGTTAA TAGCGTCCTTAATACATCA ATGT TGGTGTGTTAGGGACGTTA TTTGTTTCATAGAGA thrS 543759 - 545708 + | threonyl-tRNA synthetase TERM 593 545855 - 545881 + F 74 -5.8 -4.5538 | AACGGATTATTAAGA CGGGCATTCTGA TTT TTTGGATGTCCG TTTTCTGCATTTTCT infC 545916 - 546440 + | protein translation initiation factor 3 TERM 594 546523 - 546513 - g 74 -6.8 -4.30576 | CGTGCATCAGCAAAA CGCT TTA AGCG TACAGGAAATGGTGG rpmI 546477 - 546677 + | 50S ribosomal protein L35 TERM 595 546881 - 546869 - g 73 -7.7 -3.77666 | CATATTCAATTCAAA GTTGC TAA GCAAC AAGTTATGAAGTCAT rplT 546770 - 547132 + | 50S ribosomal protein L20 TERM 596 547125 - 547137 + T 72 -2.7 -5.4148 | overlap 547117 AGAAAGCTTTAGCTG CTGAA TAA TTTAG TTTTTTGGTTCTTTG TERM 597 547195 - 547216 + T 100 -6.7 -6.55664 | opp_overlap 547195 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTTTTGTTTTA LSL_0498 548518 - 547229 - | ISL3 family transposase TERM 598 547905 - 547915 + g 74 -5.4 -4.71584 | opp_overlap 547905 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 599 548255 - 548266 + g 70 -4.4 -4.77165 | opp_overlap 548255 548261, overlap 548260 548261 CTTGCATTCAGGACA CAGA TACT TCTG TTTTCTTATAGAAAG TERM 600 548433 - 548453 + g 81 -9.9 -3.38522 | overlap 548432 548437 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA TERM 601 548665 - 548689 + H 100 -10.1 -5.75478 | opp_overlap 548665 548669 548672 CAGTTTTTTAATTAA GTGAGAAGGTA TTT TACCTTCTTGC TTTTTTTATATCCTT TERM 602 548685 - 548669 - H 74 -9.5 -2.60244 | opp_overlap 548665, overlap 548665 548672 TTTTTAATTAAGTGA GAAGGTA TTT TACCTTC TTGCTTTTTTTATAT LSL_0499 548790 - 549329 + | HAD superfamily hydrolase LSL_0500 549316 - 550437 + | GTP-binding protein YqeH LSL_0501 550450 - 550770 + | hypothetical protein TERM 603 551011 - 550997 - g 80 -2.8 -5.65177 | overlap 550999 ATATTGATAAAAAAA CAGC TATTTCT GCTG AAAAGCGACTAAAAA nadD 550789 - 551421 + | nicotinate-nucleotide adenylyltransferase TERM 604 551592 - 551582 - g 79 -5.4 -5.02502 | opp_overlap 551582 TATAGTACAGAAAAA GCAA GTA TTGC TGCTTTAGTACATGA LSL_0503 551414 - 552013 + | hypothetical protein LSL_0504 552036 - 552389 + | Iojap-related protein TERM 605 552849 - 552835 - f 72 -5.8 -4.47873 | opp_overlap 552835 552837 ATAAGACTGATAAAA TATATC CAG GATATA TGTATAATTACAGTG LSL_0505 553146 - 554288 + | hypothetical protein LSL_0506 554365 - 554910 + | hypothetical protein rpmF 554993 - 555169 + | 50S ribosomal protein L32 TERM 606 555188 - 555210 + T 71 -9.2 -2.54896 | opp_overlap 555178 555186 555188 555193, overlap 555193 AAATATTAATTAAGA TTAAAGGGAC CAT GGCCCTTTAA TAACTTGGATAACGC TERM 607 555210 - 555188 - T 77 -9.2 -3.30161 | opp_overlap 555188 555193, overlap 555178 555186 555193 AAATATTAATTAAGA TTAAAGGGAC CAT GGCCCTTTAA TAACTTGGATAACGC TERM 608 555220 - 555253 + T 100 -14.2 -4.51363 | opp_overlap 555214 555223 CTTTAATAACTTGGA TAACGCTTTTCTTT ATTCAG AAAGAAAAGCGTTA TTTTAATATTTACTA TERM 609 555250 - 555223 - T 88 -11.5 -3.34947 | opp_overlap 555220, overlap 555214 TAATAACTTGGATAA CGCTTTTCTTT ATTCAG AAAGAAAAGCG TTATTTTAATATTTA TERM 610 555311 - 555277 - T 100 -8.9 -5.33405 | opp_overlap 555277 TTTACTAAATAAAAA GTACGATAAAATT TGAGATAAT AATTTTATCGTAC TTTTTTGAAAACTGG TERM 611 555277 - 555311 + T 95 -8.9 -5.02074 | opp_overlap 555277 TTTACTAAATAAAAA GTACGATAAAATT TGAGATAAT AATTTTATCGTAC TTTTTTGAAAACTGG plsC 555951 - 555328 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase LSL_0509 556041 - 556799 + | methyltransferase LSL_0510 556783 - 557070 + | hypothetical protein TERM 612 557220 - 557210 - f 81 -4 -5.67063 | GGGAGGATAAAAAAA CAAA TTA TTTG GAGGTAAATTGTAAT rpsB 557234 - 558031 + | 30S ribosomal protein S2 TERM 613 558045 - 558087 + F 91 -7.2 -5.25656 | gap 2, opp_overlap 558070 AGTTAGTTAACTTAG GCTGTCTCGAATTTGTGGGC AAATA GCCT-CAG-TTTGAGACAGC TTTTTTAGTAATTTT tsf 558125 - 559000 + | elongation factor Ts TERM 614 559012 - 559049 + F 100 -13.7 -5.77632 | opp_overlap 559012 559024 ATAATATTTAATTCA GTTGCTGTAAATGTTGA TTTA TCAACGTTTATGGCAAC TTTTTTTATGCTTTT LSL_0513 559288 - 559608 + | hypothetical protein TERM 615 559668 - 559634 - T 100 -12.4 -5.39681 | opp_overlap 559634 ATAATTAAATAAAAA TCCGTTCAAGAATT GTCAATA AATTCCTGAACGGA TTTTTTTTAATTTTC TERM 616 559634 - 559668 + T 100 -10.2 -6.07969 | opp_overlap 559634 ATAATTAAATAAAAA TCCGTTCAAGAATT GTCAATA AATTCCTGAACGGA TTTTTTTTAATTTTC LSL_0514 560397 - 559675 - | deoxyguanosine kinase TERM 617 561064 - 561049 - g 82 -3.2 -5.64274 | overlap 561051 TTATTTAGAAAAAAA CAGCAT GATG ATGCAG AAAAGAGCGGTGAGC purE 560602 - 561090 + | phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit TERM 618 561432 - 561417 - g 83 -4.8 -5.55695 | opp_overlap 561417 GAATAAGAGAAAAAA CTTTTT TGCA AAAAAG TGGGTTAAAAGTAGC purK 561083 - 562204 + | phosphoribosylaminoimidazole carboxylase ATPase subunit purB 562216 - 563511 + | adenylosuccinate lyase TERM 619 563527 - 563554 + F 100 -8.6 -5.72207 | opp_overlap 563527 TAAAATATATAGTAA CAGAAGTGTATT TTAT AATATGCTTCTG TTTTTTTGGTTTAAA LSL_0518 563625 - 564602 + | choloylglycine hydrolase TERM 620 564634 - 564611 - f 100 -9 -5.83226 | gap 1 AAGTTAATAAAAAAA GTTGCAGA-CT TCA AGATCTGCAAC TAAAAATGTATCTCT TERM 621 564641 - 564659 + F 80 -10.4 -2.73034 | opp_overlap 564641, overlap 564640 564638 ATCTGCAACTAAAAA TGTATCTC TTG GAGATACA GTGTTTATAGAATTT TERM 622 564659 - 564641 - f 100 -10.4 -4.86621 | opp_overlap 564641 564640 564638 ATCTGCAACTAAAAA TGTATCTC TTG GAGATACA GTGTTTATAGAATTT LSL_0519 564956 - 565783 + | hypothetical protein LSL_0520 565776 - 566123 + | hypothetical protein LSL_0521 566127 - 566771 + | hypothetical protein TERM 623 567231 - 567207 - f 100 -14.5 -5.72622 | TGTATAAATAAAAAA GGATTAGGATT AAA AATCCTAATCC AACAATTATAAAATG LSL_0522 567551 - 568237 + | two-component response regulator TERM 624 568297 - 568283 - g 86 -5.8 -5.54338 | GAATGAAAAGAAAAA GAAAAA GTT TTTTTC GATTAACTTAAAATG csrS 568257 - 569747 + | transmembrane histidine kinase TERM 625 569745 - 569776 + T 100 -11.1 -5.38951 | opp_overlap 569745 TTAGATAATAAAAAA TAAGAAGTATGGC AAGTAA GTCATACTTCTTA TTTTTTATATAGCTT TERM 626 569776 - 569745 - T 100 -8.9 -5.60689 | opp_overlap 569745 TTAGATAATAAAAAA TAAGAAGTATGGC AAGTAA GTCATACTTCTTA TTTTTTATATAGCTT TERM 627 569913 - 569871 - T 74 -6.4 -4.36262 | gap 1, opp_overlap 569871 ATAGTTATATTAAAA GCCGCTAGGAATCAACGTT TTTAGT AACGC-GATTTTTAGCGGC TTTTTCTAGTCTCGA TERM 628 569871 - 569913 + T 95 -8.6 -4.95155 | gap 1, opp_overlap 569871 ATAGTTATATTAAAA GCCGCTAGGAATCAACGTT TTTAGT AACGC-GATTTTTAGCGGC TTTTTCTAGTCTCGA yidC 570871 - 569948 - | 60 kDa inner membrane protein TERM 629 570973 - 570942 - R 73 -4.6 -5.0916 | overlap 570922 570921 TTTTCAATATAAAAA TAAACAAGCG GATACAGTGAAA CGCTTGTTTA AACAACTAATAAGTT acyP 571251 - 570979 - | acylphosphatase LSL_0526 571364 - 572527 + | hydroxymethylglutaryl-CoA synthase LSL_0527 572638 - 573519 + | hypothetical protein LSL_0528 573521 - 574516 + | hypothetical protein LSL_0529 574547 - 574999 + | hypothetical protein efp 575133 - 575690 + | protein translation elongation factor P LSL_0531 575707 - 576129 + | alkaline shock protein nusB 576129 - 576524 + | transcription antitermination protein NusB TERM 630 576564 - 576528 - f 76 -5.3 -5.1167 | opp_overlap 576533, overlap 576533 AACTTAATATAAAAA TGAAATACAGTTATATC ACT GATATAGCTGTATTTTT GATTATATAATTAGT TERM 631 576533 - 576559 + F 100 -11.8 -4.96646 | opp_overlap 576533 576528 AATATAAAAATGAAA TACAGTTATATC ACT GATATAGCTGTA TTTTTGATTATATAA TERM 632 576559 - 576533 - f 91 -9.6 -4.41882 | opp_overlap 576533, overlap 576528 AATATAAAAATGAAA TACAGTTATATC ACT GATATAGCTGTA TTTTTGATTATATAA folD 576669 - 577526 + | methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase xseA 577519 - 578859 + | exodeoxyribonuclease VII large subunit xseB 578859 - 579086 + | exodeoxyribonuclease VII small subunit TERM 633 579136 - 579110 - g 84 -6.6 -5.09426 | CTGAATTTGAAAAAA TCTCACTCCCAA AAT TAGAGAATGAGA TGGATCTTTATTTAA ispA 579076 - 579969 + | geranyltranstransferase TERM 634 580236 - 580222 - g 93 -7.2 -5.43553 | ATGCAAAAAATAAAA CTATGT TAG ACATAG GATCGTCTACTGGAG LSL_0537 579972 - 580799 + | hemolysin argR 580824 - 581282 + | arginine repressor recN 581287 - 582954 + | DNA repair protein lexA 583638 - 583018 - | LexA repressor TERM 635 583710 - 583692 - H 71 -8.2 -3.31931 | opp_overlap 583692 583691 583689, overlap 583695 GCATAGAATTATTAA GAACGTCA AAC TAACGTTC GTGTTTATAACTTGT LSL_0541 583785 - 584039 + | hypothetical protein LSL_0542 584166 - 584390 + | hypothetical protein LSL_0543 584473 - 585063 + | GTP-binding protein LSL_0544 585081 - 585380 + | hypothetical protein TERM 636 585418 - 585382 - f 74 -9.7 -2.73969 | opp_overlap 585387 585414, overlap 585387 ATCCAGCAAATTAAT CAAAAGTCATTGTGTTT ATG AAACATAATGACTTTTT TATTAAGAAATATTT TERM 637 585413 - 585387 - f 91 -9.6 -4.5287 | opp_overlap 585387, overlap 585382 GCAAATTAATCAAAA GTCATTGTGTTT ATG AAACATAATGAC TTTTTTATTAAGAAA TERM 638 585387 - 585413 + F 100 -11.8 -5.4505 | opp_overlap 585387 585382 GCAAATTAATCAAAA GTCATTGTGTTT ATG AAACATAATGAC TTTTTTATTAAGAAA LSL_0545 585475 - 587298 + | hypothetical protein TERM 639 587325 - 587356 + F 100 -13.2 -3.8211 | gap 1 TGGTAAATTGACGTG TACCCCCAGAGTTGG AAA TCAACT-TGGGGGTA TTATTATGACTAAAA TERM 640 588564 - 588574 + G 74 -5.4 -4.7373 | TCTAGATAACGCTGC CTGT GAA ACAG TTTTTAGTAAGCTAA TERM 641 588741 - 588694 - g 85 -9.4 -4.08485 | gap 1, overlap 588695 CGGATTCAAACGAAA CTAGGCAACCAAACTCCACTTCA ATA CGA-GCAAAGTTTGATTGCCTAA AAAAATATTTATTCA TERM 642 588740 - 588695 - g 83 -10.7 -3.04609 | gap 1, overlap 588694 GGATTCAAACGAAAC TAGGCAACCAAACTCCACTTCA ATA CGA-GCAAAGTTTGATTGCCTA AAAAAATATTTATTC LSL_0546 587362 - 588741 + | IS3 family transposase TERM 643 589215 - 589197 - g 82 -3.2 -5.76237 | overlap 589198 GAGAGAAATAAAAAA TCTCTA GAAAGAG TAGAGA AATCTTTACACGAGA LSL_0547 588945 - 591074 + | hypothetical protein rpmG 591222 - 591371 + | 50S ribosomal protein L33 TERM 644 591395 - 591369 - f 90 -8.1 -4.87803 | opp_overlap 591372, overlap 591372 CATCGTGAAACAAAA TAACAACAGGA AAAAA TCCTGTTGTTT TTTTCTTTATGTACG TERM 645 591392 - 591372 - f 91 -9.8 -4.54026 | opp_overlap 591372, overlap 591369 CGTGAAACAAAATAA CAACAGGA AAAAA TCCTGTTG TTTTTTTCTTTATGT TERM 646 591372 - 591392 + F 100 -9.8 -6.04953 | opp_overlap 591372 591369 CGTGAAACAAAATAA CAACAGGA AAAAA TCCTGTTG TTTTTTTCTTTATGT TERM 647 591668 - 591638 - g 74 -5.6 -4.71426 | opp_overlap 591645, overlap 591645 TGCTCAGCAACAAAA TAAAAAAGTTTTAG TAC CTAAGACTTTTCCA AATAGAATGATGGAG TERM 648 591661 - 591645 - g 90 -3.7 -5.92399 | opp_overlap 591645, overlap 591638 CAACAAAATAAAAAA GTTTTAG TAC CTAAGAC TTTTCCAAATAGAAT LSL_0549 591426 - 591974 + | 5-formyltetrahydrofolate cyclo-ligase LSL_0550 591988 - 592650 + | rhomboid family integral membrane protein LSL_0551 592690 - 592929 + | hypothetical protein LSL_0552 592926 - 593888 + | glucokinase LSL_0553 593931 - 594344 + | hypothetical protein TERM 649 594393 - 594348 - T 90 -10.8 -3.86733 | gap 1, opp_overlap 594354, overlap 594339 594354 AGCAAATATTAATAA TAAAAATAGCAGCAAGGCTAA TAAAT CTAG-CTTGCTGCTATTTTGA TATAAGACAATTACT TERM 650 594354 - 594387 + T 88 -9.1 -4.34402 | gap 1, opp_overlap 594354 594348 TATTAATAATAAAAA TAGCAGCAAGGCTA ATAAATC TAG-CTTGCTGCTA TTTTGATATAAGACA TERM 651 594387 - 594354 - T 100 -9.8 -5.31855 | gap 1, opp_overlap 594354, overlap 594348 TATTAATAATAAAAA TAGCAGCAAGGCTAA TAAAT CTAG-CTTGCTGCTA TTTTGATATAAGACA LSL_0554 594590 - 594414 - | hypothetical protein miaA 594722 - 595645 + | tRNA delta(2)-isopentenylpyrophosphate transferase LSL_0556 595667 - 596929 + | aluminum resistance protein glnR 597020 - 597406 + | glutamine synthetase repressor TERM 652 597883 - 597872 - g 70 -2.2 -5.2422 | AATTAGATGAAAAAA CTGG ACGT CCAA CAATCCACTTAAATG TERM 653 598134 - 598104 - g 72 -9.2 -2.60615 | opp_overlap 598104, overlap 598103 598101 ACTTGTTGTAAAGAC TGTTGCACGTAA ATATGGA TTACATGCAACA TTTATGCCAAAACCA TERM 654 598104 - 598134 + G 70 -7 -3.85698 | opp_overlap 598104 598103 598101 ACTTGTTGTAAAGAC TGTTGCACGTAA ATATGGA TTACATGCAACA TTTATGCCAAAACCA glnA 597436 - 598779 + | glutamine synthetase TERM 655 598790 - 598821 + F 100 -10.4 -5.46276 | opp_overlap 598792 598796 ATTAGTGAACTTTAA GATGAATAAGTC ATTTTGTG GACTTATTCATC TTTTTTATATATGTT TERM 656 599114 - 599172 + F 100 -30.3 -6.06723 | gap 1, opp_overlap 599105 599117 599123 TAATAATAGTTTTAG CAACACTAAGCGGATGATAAGATAG-TA TAGG TAGCTATCTTATCATCCGCTTAGTGTTG TTTTTTTTTAAGGAG TERM 657 599169 - 599117 - f 100 -26.2 -3.16668 | gap 1, opp_overlap 599114, overlap 599105 599123 TAATAGTTTTAGCAA CACTAAGCGGATGATAAGATAG-TA TAGG TAGCTATCTTATCATCCGCTTAGTG TTGTTTTTTTTTAAG TERM 658 599163 - 599123 - f 100 -18 -3.39449 | gap 1, opp_overlap 599114, overlap 599117 TTTTAGCAACACTAA GCGGATGATAAGATAG-TA TAGG TAGCTATCTTATCATCCGC TTAGTGTTGTTTTTT ada 599192 - 599653 + | O6-methylguanine-DNA methyltransferase LSL_0560 599740 - 600117 + | hypothetical protein pyrH 600230 - 600952 + | uridylate kinase frr 600955 - 601518 + | ribosome recycling factor, RRF TERM 659 601542 - 601565 + F 100 -6.8 -5.9218 | ACTATTGTATCACGA GGGTAAAG ATTTGTTA CTTTACCC TTTTTTTATTGTATA uppS 601653 - 602435 + | undecaprenyl pyrophosphate synthetase TERM 660 602658 - 602669 + G 79 -4.4 -5.31877 | ATTGGATCAATTTTT TTCC AAAT GGAA TTTTTTATAGTGGAT cdsA 602438 - 603226 + | phosphatidate cytidylyltransferase TERM 661 603722 - 603710 - g 71 -7.7 -3.70104 | AATGATGGAACAGAA GTGCA AAT TGCAC CTAAAGATGTCCAAT LSL_0565 603251 - 604528 + | M50 family membrane endopeptidase proS 604579 - 606294 + | prolyl-tRNA synthetase TERM 662 608606 - 608590 - g 75 -7.3 -4.14541 | CACGAACTAGATAAA CCAATAG TTG CTACTGG AGATGTTCATTTTAT TERM 663 609481 - 609465 - g 74 -5.2 -4.70772 | overlap 609455 AGATACTGAACAAAA TTTCAG AGGTG CTGAAA TAGATAGACTAGCTA TERM 664 610005 - 609987 - g 79 -3.8 -5.57396 | AGAATTAATAAAAAA TGGGACTG TAA CAATGCCA GACGTTATAGGATGT TERM 665 610647 - 610661 + G 78 -7.2 -4.36914 | overlap 610659 GAGGGGAAAAGTATC TCAATC ATT GATTGA TTTTATGACAGAAAA dnaE 606391 - 610725 + | DNA polymerase III PolC TERM 666 610858 - 610837 - f 100 -13.1 -3.63305 | opp_overlap 610837 TAGATAACTCGTAAA GAGTGAGCA GAAA TGCTCACTC TTTTTGTTGGAATAG TERM 667 610837 - 610858 + F 100 -13.1 -5.08601 | opp_overlap 610837 TAGATAACTCGTAAA GAGTGAGCA GAAA TGCTCACTC TTTTTGTTGGAATAG LSL_0568 610934 - 611407 + | hypothetical protein nusA 611433 - 612560 + | transcription elongation factor NusA LSL_0570 612563 - 612862 + | hypothetical protein rPL 612852 - 613157 + | 50S ribosomal protein L7AE TERM 668 614643 - 614633 - g 74 -3.2 -5.23316 | TATGATATTAAAAAA GCTA CAC CAGC GACACCTGTAGAAAT infB 613229 - 615442 + | translation initiation factor IF-2 rbfA 615466 - 615825 + | ribosome-binding factor A TERM 669 615847 - 615874 + F 89 -7.8 -5.01732 | overlap 615870 TAAGAAAGTATTTAA GAGGGTATGGTT GTTA AATCGTACTCTC TTTTTTGGAGGGATT truB 615895 - 616803 + | tRNA pseudouridine synthase B ribF 616816 - 617772 + | riboflavin kinase / FMN adenylyltransferase hrcA 617893 - 618945 + | heat-inducible transcription repressor grpE 618942 - 619538 + | GrpE protein dnaK 619577 - 621424 + | molecular chaperone DnaK TERM 670 621444 - 621479 + F 88 -9.1 -4.27007 | opp_overlap 621444, overlap 621450 TATCTTGTAAAATAG GATTGAGCCATATGC TTTTAT GCATGTGGCTTTATC TTTATTAACTATTTA TERM 671 621450 - 621473 + F 89 -8.9 -4.46072 | opp_overlap 621444, overlap 621444 GTAAAATAGGATTGA GCCATATGC TTTTAT GCATGTGGC TTTATCTTTATTAAC TERM 672 621521 - 621539 + F 73 -9 -2.92667 | overlap 621519 GTTGTGTAAATTTGG CAAAATGA AAG TCATTTTG TACTTTGAAAATTGG TERM 673 622193 - 622168 - g 80 -2.7 -5.67711 | gap 1, overlap 622162 GAAATAAAAGAAAAA TGCTCCACTT GTCACGG AAGTGGA-CA TGTAAATGAACAACA TERM 674 622468 - 622457 - g 70 -4.4 -4.67641 | AGGTTAAAATGAAAA TTCC AGCT GGAA CTCAAACAGGAACAA dnaJ 621565 - 622698 + | chaperone protein TERM 675 622717 - 622747 + F 100 -12.1 -4.42806 | opp_overlap 622708 622717 GATAAATTGATGAAA TATACCTTTGGCT TCGTT AGTCAAAGGTATA TTTGTTTAAAGGTGA TERM 676 622747 - 622717 - f 87 -9.9 -3.83169 | opp_overlap 622717, overlap 622708 GATAAATTGATGAAA TATACCTTTGGCT TCGTT AGTCAAAGGTATA TTTGTTTAAAGGTGA lepA 622843 - 624672 + | GTP-binding protein LepA TERM 677 624684 - 624718 + F 93 -6.4 -5.60993 | ATAAGTATATTTTTA GAGTACTGGATGAGTT AAC AACAATTCCGGTACTC TTTTTTTATGGGAAA TERM 678 624943 - 624977 + F 84 -3.7 -5.7946 | overlap 624948 ATTGAATACCGTATT TTTAAGGATAAATCT TGCAT AGGTTTATCCTTTTA TTTTTTTATTGAAAA TERM 679 624948 - 624972 + F 100 -8 -5.64328 | overlap 624943 ATACCGTATTTTTAA GGATAAATCT TGCAT AGGTTTATCC TTTTATTTTTTTATT TERM 680 625625 - 625612 - g 70 -3.9 -4.90013 | opp_overlap 625622, overlap 625614 GAACGTAAGCAAAAA TTTGA TTTT TCAAA ACCATATTATTCATC TERM 681 626371 - 626351 - g 74 -5.4 -4.8083 | opp_overlap 626351 TAACAGGATCAAAAA TTCCAGCA TTTAT CGCCGGAA TTATTACATTAACTT glnP 625291 - 626748 + | glutamine-binding protein / glutamine transport system permease protein glnQ 626748 - 627488 + | glutamine transport ATP-binding protein TERM 682 627557 - 627515 - T 93 -10.9 -4.08651 | gap 1, opp_overlap 627515 627516, overlap 627516 ATTGGAATTAAATAA CCGCTAAAGATTG-CATTAT TTTA ATAATGGCGATCTTTAGCGA TTTTTATTTTATTAT TERM 683 627515 - 627557 + T 100 -10.9 -5.64321 | gap 1, opp_overlap 627515 627516, overlap 627516 ATTGGAATTAAATAA CCGCTAAAGATTG-CATTAT TTTA ATAATGGCGATCTTTAGCGA TTTTTATTTTATTAT TERM 684 627516 - 627556 + T 100 -14.4 -3.94933 | gap 1, opp_overlap 627515 627516, overlap 627515 TTGGAATTAAATAAC CGCTAAAGATTG-CATTAT TTTA ATAATGGCGATCTTTAGCG ATTTTTATTTTATTA TERM 685 627556 - 627516 - T 90 -12.2 -3.04468 | gap 1, opp_overlap 627516 627515, overlap 627515 TTGGAATTAAATAAC CGCTAAAGATTG-CATTAT TTTA ATAATGGCGATCTTTAGCG ATTTTTATTTTATTA LSL_0583 627898 - 627569 - | hypothetical protein ampC 627991 - 628992 + | Beta-lactamase family protein TERM 686 629065 - 629095 + T 100 -17 -4.75776 | GTAAAACTTTATGCG GCCTGATTTCGGTA TTC TACCGGAGTCAGGC TTTTTAGATTCCATT LSL_0585 629855 - 629058 - | IS3 family transposase TERM 687 629512 - 629531 + g 75 -5 -4.90869 | opp_overlap 629512 629514, overlap 629514 TCACCATACTTCAAA TAGGTAAC GTCA GTTACCCA TTTTTCGTTAATAGT LSL_0586 630640 - 629972 - | IS3 family transposase TERM 688 630704 - 630649 - R 100 -12.9 -5.1523 | gap 1 CTGACAATATAAAAA CTCCCTTCAGAGTAAGATACAGAATT TACAT ATTTCTGTGTCT-ACCCTAAAGGGAG CATATCAATAGTAGA LSL_0587 631449 - 630745 - | cobyric acid synthase TERM 689 631189 - 631170 - G 76 -7.8 -3.98661 | opp_overlap 631170 GATACCCACCACAAA TGGCAAGC ATTG GCCCGCCA TCATGTATATATTTA murE 632801 - 631452 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 690 631883 - 631895 + g 80 -6.3 -4.81685 | TCTTGATAACTTCTT GTCTT CCA AAGAC TTTTTCATCGTTACT tdk 633074 - 633679 + | thymidine kinase prfA 633672 - 634754 + | peptide chain release factor 1 TERM 691 634771 - 634784 + G 79 -4.5 -5.24796 | CCAACATTTTTTGAA GTCCA GAAA TGGGC TTTTTCTTGTATAAA LSL_0591 634747 - 635586 + | peptide release factor-glutamine N5-methyltransferase LSL_0592 635604 - 636614 + | Sua5/YciO/YrdC/YwlC family protein TERM 692 636786 - 636776 - g 73 -4 -5.05601 | TATTAGAGATAAAAA TTGT GGA ACAA GAGAATTTAGACAAT upp 636708 - 637337 + | uracil phosphoribosyltransferase TERM 693 637384 - 637419 + F 100 -10 -5.25799 | opp_overlap 637384 TAATTACTTTTAAAA TGATGATTTATTGAAT TTAA ATGCGATAAATCATCA TTTTTGTATTATTTT TERM 694 637419 - 637384 - f 77 -7.8 -4.12902 | opp_overlap 637384 TAATTACTTTTAAAA TGATGATTTATTGAAT TTAA ATGCGATAAATCATCA TTTTTGTATTATTTT atpB 637568 - 638281 + | F0F1 ATP synthase subunit A atpE 638300 - 638524 + | ATP synthase C chain atpF 638577 - 639104 + | ATP synthase B chain TERM 695 639287 - 639309 + G 73 -8.6 -3.20207 | opp_overlap 639287 639288, overlap 639288 TGAAGATTATGGAAA TTTTGAAGAA AGA TTCTTCAAAG TTAATGACTAATCTT TERM 696 639308 - 639288 - g 76 -9.9 -2.82482 | opp_overlap 639288 639287, overlap 639287 GAAGATTATGGAAAT TTTGAAGAA AGA TTCTTCAAA GTTAATGACTAATCT TERM 697 639288 - 639308 + G 75 -9.9 -2.51642 | opp_overlap 639287 639288, overlap 639287 GAAGATTATGGAAAT TTTGAAGAA AGA TTCTTCAAA GTTAATGACTAATCT TERM 698 639519 - 639508 - g 82 -4.4 -5.40072 | GTTGGTGCAAAAAAA GTCA TTAT TGAC CCTATTGTCGATCCT atpH 639091 - 639633 + | ATP synthase delta chain TERM 699 640229 - 640215 - g 76 -4.3 -5.05505 | opp_overlap 640215 ATCATAAATCAAAAA GATCA AGATA TGATC TGTATTTATGTAGCT TERM 700 640594 - 640604 + G 81 -8.2 -4.15044 | opp_overlap 640594 640591 GTGGAGGATCAATGA CGGC ATT GCCG TTTATTGAAACAAAA TERM 701 641100 - 641086 - g 77 -8.6 -3.59733 | overlap 641084 ACGAAATAGCAAATA CAGGTA AAC TACCTG AAACTGAAAAATTAG atpA 639654 - 641165 + | F0F1 ATP synthase subunit alpha atpG 641185 - 642114 + | F0F1 ATP synthase subunit gamma atpD 642139 - 643545 + | F0F1 ATP synthase subunit beta atpC 643560 - 643979 + | ATP synthase epsilon chain TERM 702 643992 - 644014 + F 100 -7.8 -5.71712 | opp_overlap 643981 643992 TAATCATAATAGAAA GACAGTATTT TTT GGATACTGTC TTTTTTTATGTAGAA TERM 703 644014 - 643992 - f 70 -6.4 -4.30911 | opp_overlap 643992, overlap 643981 TAATCATAATAGAAA GACAGTAT TTTTTGG ATACTGTC TTTTTTTATGTAGAA LSL_0602 644116 - 644346 + | hypothetical protein murA 644366 - 645691 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 704 645705 - 645733 + F 77 -8.3 -3.80437 | overlap 645704 AACTAAGTTCTTAAT CCGTTAAATCA AATAAGA TGGTTTAACGG TATTTTAGTGCTTTT TERM 705 646114 - 646104 - gf 80 -2.6 -5.626 | opp_overlap 646112 TATTTCATAAAAAAA TTAA ACG TTAA AGGTTTTATGTCTCG mreB 645849 - 646835 + | rod shape-determining protein LSL_0605 646810 - 647073 + | hypothetical protein LSL_0606 647085 - 647306 + | hypothetical protein TERM 706 647984 - 648003 + G 75 -10 -2.6563 | opp_overlap 647981 647984, overlap 647981 647980 TCTTGGAAGATACTA GCACCTCT TTTT GGAGGTGC TGCCTTCTTAGGAAC TERM 707 648003 - 647984 - g 72 -9.3 -2.7535 | opp_overlap 647984 647981 647980, overlap 647981 TCTTGGAAGATACTA GCACCTC TTTTTG GAGGTGC TGCCTTCTTAGGAAC ftsW 647378 - 648580 + | rod shape determining protein arsC 648605 - 648958 + | arsenate reductase TERM 708 648975 - 649026 + T 90 -12.2 -3.0353 | gap 1, opp_overlap 648981, overlap 648981 AAGTAATTCTAAAAT TGAAAATTCGAACTATAATTTATTA ATC TAATA-ATTATGGTTCGAATTTTTG GTTCTTTGTCAAAAA TERM 709 649020 - 648981 - T 89 -9 -4.4267 | gap 1, opp_overlap 648981 648975 TTCTAAAATTGAAAA TTCGAACTATAATTTATTA ATC TAATA-ATTATGGTTCGAA TTTTTGGTTCTTTGT TERM 710 648981 - 649020 + T 100 -11.2 -5.05712 | gap 1, opp_overlap 648981, overlap 648975 TTCTAAAATTGAAAA TTCGAACTATAATTTATTA ATC TAATA-ATTATGGTTCGAA TTTTTGGTTCTTTGT TERM 711 649077 - 649098 + T 100 -6.7 -6.55664 | opp_overlap 649077 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTTTTGTTTTA LSL_0609 650400 - 649111 - | ISL3 family transposase TERM 712 649787 - 649797 + g 74 -5.4 -4.71584 | opp_overlap 649787 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 713 650137 - 650148 + g 70 -4.4 -4.77165 | opp_overlap 650137 650143, overlap 650142 650143 CTTGCATTCAGGACA CAGA TACT TCTG TTTTCTTATAGAAAG TERM 714 650315 - 650335 + g 81 -9.9 -3.38522 | overlap 650314 650319 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA TERM 715 651016 - 651002 - g 70 -4.3 -4.70583 | TTTATGAAGATAAAA GTTCA TTAGG TGAAC AAATAGATACTTTAG LSL_0610 650629 - 651483 + | hypothetical protein gmk 651605 - 652222 + | guanylate kinase LSL_0612 652224 - 652421 + | DNA-directed RNA polymerase omega chain TERM 716 652449 - 652472 + F 100 -11 -5.31275 | opp_overlap 652449 AGTAGCTATATTAAA GCCGTAGAGA TTGT TCTCCACGGC TTTTTTATAATGAAA TERM 717 652472 - 652449 - f 100 -13.2 -3.85092 | opp_overlap 652449 AGTAGCTATATTAAA GCCGTAGAGA TTGT TCTCCACGGC TTTTTTATAATGAAA TERM 718 652606 - 652626 + G 72 -9.1 -2.63252 | overlap 652605 652603 TTTTAACAGGTGGAA TTGCTGTTT ATA AAGCAGCAA ATGTTGTTAGAGGCT LSL_0613 652566 - 653765 + | phosphopantothenoylcysteine decarboxylase / phosphopantothenate-cysteine ligase LSL_0613b 653814 - 656192 + | primosomal protein n-prim TERM 719 656774 - 656748 - g 73 -7.4 -3.85817 | ATGTGCTTCTAGAAA CATTACCTAAAA TTA TTTCTGGTAATG TTGAAGCTGTAAAAC fmt 656210 - 657166 + | methionyl-tRNA formyltransferase LSL_0615 657156 - 658493 + | 16S rRNA m(5)C 967 methyltransferase LSL_0616 658506 - 659249 + | protein phosphatase 2C TERM 720 659830 - 659846 + F 70 -4.5 -4.89521 | TAAGCAATCCGATAT TTATTCT TTA GGAATAA TTTTGTTTGAAATGT TERM 721 660957 - 660986 + F 82 -5.1 -5.49569 | opp_overlap 660950 660957, overlap 660950 TAGCTAAATAATAAA GTGAGGAAATATA AGGA TGTATTTCTCCAC TTTTTTATATTAATG TERM 722 661740 - 661719 - g 95 -8.9 -4.95302 | TTAAATATAACAAAA GATACATTA CCAT TAATGTATC CAGATTTTGTTAAAT LSL_0617 661023 - 661913 + | GTPase LSL_0618 661910 - 662572 + | thiamin pyrophosphokinase TERM 723 662570 - 662624 + T 100 -13.3 -2.53228 | opp_overlap 662581, overlap 662576 662581 ATTCAAAGTAAAGAT TAAAAGTAAAAGGTCATAATGCTTC AATTC GAAACATTATGACCTTTAGTTTTTA GTATATTACTTGTTA TERM 724 662576 - 662618 + T 100 -10.1 -4.87807 | opp_overlap 662581, overlap 662570 662581 AGTAAAGATTAAAAG TAAAAGGTCATAATGCTTC AATTC GAAACATTATGACCTTTAG TTTTTAGTATATTAC TERM 725 662613 - 662581 - T 100 -15.1 -4.71222 | opp_overlap 662581 662576 662570 AGATTAAAAGTAAAA GGTCATAATGCTTCA ATT CGAAACATTATGACC TTTAGTTTTTAGTAT TERM 726 662581 - 662613 + T 100 -12.2 -4.3623 | opp_overlap 662581, overlap 662576 662570 AGATTAAAAGTAAAA GGTCATAATGCTTC AATTC GAAACATTATGACC TTTAGTTTTTAGTAT rpmB 662829 - 662644 - | 50S ribosomal protein L28 LSL_0620 663094 - 663456 + | hypothetical protein LSL_0621 663499 - 665199 + | hypothetical protein recG 665280 - 667310 + | ATP-dependent DNA helicase TERM 727 668059 - 668037 - g 73 -8.4 -3.5365 | opp_overlap 668037, overlap 668038 TTAAAGGCTATAGAA GGCACAGCTG GTA CAGCTATGCA TCTCTTAAAAGATAC TERM 728 668058 - 668038 - g 84 -11.9 -2.71708 | opp_overlap 668037, overlap 668037 TAAAGGCTATAGAAG GCACAGCTG GTA CAGCTATGC ATCTCTTAAAAGATA plsX 667323 - 668324 + | Fatty acid/phospholipid synthesis protein acpP 668401 - 668643 + | Acyl carrier protein TERM 729 668656 - 668674 + F 80 -5.2 -5.23316 | opp_overlap 668656 TAATTTAAGATGGAA GCTGGC ACATATA GCCGGC TTTTTTGGTATAATA rnc 668797 - 669495 + | ribonuclease III TERM 730 671555 - 671535 - g 71 -3.4 -5.18726 | overlap 671547 CTGTTAGAACAAAAA TTACAAAT TGAAG ATTTGCAA TCCGATATCGAAGTA TERM 731 672095 - 672077 - g 89 -3.2 -5.79595 | TGCGAAAATAAAAAA TAAAGAAA AAA TTGCTTTA AGTGCCAAAGAAGAT smc 669510 - 673046 + | chromosome partition protein ftsY 673058 - 674329 + | cell division protein LSL_0628 674348 - 674686 + | Signal recognition particle associated protein ffh 674693 - 676141 + | Signal recognition particle protein rpsP 676236 - 676511 + | 30S ribosomal protein S16 LSL_0631 676521 - 676766 + | RNA binding protein TERM 732 676786 - 676821 + F 100 -10.6 -5.30199 | opp_overlap 676786 TATAAAGTTAAGAAA CCTCAAAATAAGGAGT GTAC ATACCTTGTTTTGAGG TTTTTATTAATTTTT TERM 733 676821 - 676786 - f 70 -6.3 -4.30933 | opp_overlap 676786 TATAAAGTTAAGAAA CCTCAAAATAAGG AGTGTACATA CCTTGTTTTGAGG TTTTTATTAATTTTT rimM 676851 - 677357 + | 16S rRNA processing protein TERM 734 677508 - 677497 - g 71 -3 -5.12172 | opp_overlap 677497 TACTAATAAACAAAA TCAT GTAG ATGA TTATCCATACGGTGG trmD 677360 - 678112 + | tRNA (guanine-N(1)-)-methyltransferase LSL_0634 678099 - 678695 + | phosphinothricin N-acetyltransferase LSL_0635 678692 - 680122 + | amino acid permease rplS 680239 - 680595 + | 50S ribosomal protein L19 TERM 735 680604 - 680627 + T 100 -14 -6.01369 | opp_overlap 680608 TGGCTAAAAACGTTA GAAACCTTGC TGTT GCAAGGTTTC TTTTTTTATTCTTTA TERM 736 680623 - 680608 - T 85 -9 -3.99013 | opp_overlap 680604 TAAAAACGTTAGAAA CCTTGC TGTT GCAAGG TTTCTTTTTTTATTC TERM 737 680917 - 680889 - T 100 -18.3 -6.09196 | opp_overlap 680889 TCTAAAAGAAAAAAA CTGGCGAACCAAA AAA TTCGGTTCGCCAG TTTTTTAAGTCAATT TERM 738 680889 - 680917 + T 100 -16.1 -5.10497 | opp_overlap 680889 TCTAAAAGAAAAAAA CTGGCGAACCAAA AAA TTCGGTTCGCCAG TTTTTTAAGTCAATT rpsT 681185 - 680931 - | 30S ribosomal protein S20 rpsO 681489 - 681758 + | SSU ribosomal protein S15P TERM 739 681786 - 681809 + F 100 -9.7 -5.64274 | opp_overlap 681788 ATTGCATACTTTATA GAGCTAGTA GTTTTA TACTAGCTC TTTTTTTATACGTCA dapA 681898 - 682770 + | dihydrodipicolinate synthase LSL_0640 682789 - 684486 + | metallo-beta-lactamase superfamily protein TERM 740 684495 - 684518 + F 100 -9.7 -5.26316 | opp_overlap 684495 AGGTTAATATTAAAA GTCGTTGAA CAAATC TTCAACGAC TTTTTTATAAGGTGA TERM 741 684518 - 684495 - f 91 -9.7 -4.43012 | opp_overlap 684495 AGGTTAATATTAAAA GTCGTTGAA CAAATC TTCAACGAC TTTTTTATAAGGTGA LSL_0641 684538 - 685425 + | hypothetical protein TERM 742 685465 - 685493 + F 73 -8.4 -3.56273 | opp_overlap 685465 685469, overlap 685470 CAAAATAGATGAAAA TAAAGTATGCAA AAAGA TTGCATATTTTA TTGTGTGATGATAAA TERM 743 685493 - 685465 - f 74 -6.2 -4.48903 | opp_overlap 685465 685470, overlap 685469 CAAAATAGATGAAAA TAAAGTATGCAA AAAGA TTGCATATTTTA TTGTGTGATGATAAA TERM 744 685470 - 685488 + F 80 -6.1 -4.85918 | opp_overlap 685469 685465, overlap 685465 TAGATGAAAATAAAG TATGCAA AAAGA TTGCATA TTTTATTGTGTGATG TERM 745 685599 - 685620 + F 71 -7.5 -3.56568 | opp_overlap 685595, overlap 685595 685616 ACAATGAATTATTTT CAAAAAAAT TATA ATTTTTTTG TTTACAAAATCATTC TERM 746 685725 - 685741 + F 83 -8.1 -4.19974 | ATAAAAACAAAGGTT TATCGTA TTA TACGATA TTTCTTGCAAATTTT tufB 685773 - 686960 + | elongation factor Tu TERM 747 687025 - 687004 - f 87 -8.7 -4.183 | opp_overlap 687004 687022 687024, overlap 687007 TTAACTTTCAAGAAA GAGGGTTGG TTTT CCAACCTTC TTTTTTTGTGTAAAA TERM 748 687004 - 687025 + F 100 -10.9 -5.71712 | opp_overlap 687004 687007, overlap 687022 687024 TTAACTTTCAAGAAA GAGGGTTGG TTTT CCAACCTTC TTTTTTTGTGTAAAA TERM 749 687022 - 687007 - f 73 -9 -2.80512 | opp_overlap 687004, overlap 687004 ACTTTCAAGAAAGAG GGTTGG TTTT CCAACC TTCTTTTTTTGTGTA tig 687160 - 688470 + | trigger factor, PPIase TERM 750 688538 - 688565 + F 100 -7.8 -5.84381 | TAATTAGTTATAGAA GTGCTGATGGAT GAAA ATCTATTGGCAC TTTTTTTATTAATAA clpX 688685 - 689911 + | ATP-dependent protease ATP-binding subunit TERM 751 691251 - 691271 + G 72 -9.1 -2.54098 | overlap 691250 ATGTCCGTGATATTG CTGCTTTAG CAA TTAAAGCAG GTGTTGCTTGCCCAG gnd 690020 - 691441 + | 6-phosphogluconate dehydrogenase TERM 752 691505 - 691465 - T 100 -14.3 -4.51378 | opp_overlap 691468, overlap 691468 ATGTATAGTATAAAA TAACGGTATAAGGACTATT AAC AATAGTTCTTATACCGTTT TTAATATATCTAAAT TERM 753 691468 - 691502 + T 100 -18.2 -4.86133 | opp_overlap 691465 691468 TATAGTATAAAATAA CGGTATAAGGACTATT AAC AATAGTTCTTATACCG TTTTTAATATATCTA TERM 754 691502 - 691468 - T 100 -16 -4.36649 | opp_overlap 691468, overlap 691465 TATAGTATAAAATAA CGGTATAAGGACTATT AAC AATAGTTCTTATACCG TTTTTAATATATCTA LSL_0646 693196 - 691520 - | metallo-beta-lactamase superfamily protein LSL_0647 693416 - 693201 - | hypothetical protein LSL_0648 693623 - 694126 + | hypothetical protein TERM 755 694202 - 694149 - T 100 -15.2 -5.30155 | gap 1, opp_overlap 694149 694154, overlap 694154 TCATCAAGTAAAAAA TAAAAGATCGATAAAGATTAA-GTT ATTAA AACATTAATCTTTATCGATCTTTTG CTTGTATAAAATTAT TERM 756 694149 - 694202 + T 100 -17.4 -2.71261 | gap 1, opp_overlap 694149 694154, overlap 694154 TCATCAAGTAAAAAA TAAAAGATCGATAAAGATTAA-GTT ATTAA AACATTAATCTTTATCGATCTTTTG CTTGTATAAAATTAT TERM 757 694197 - 694154 - T 100 -15.1 -5.47846 | gap 1, opp_overlap 694149 694154, overlap 694149 AAGTAAAAAATAAAA GATCGATAAAGATTAA-GTT ATTAA AACATTAATCTTTATCGATC TTTTGCTTGTATAAA TERM 758 694154 - 694197 + T 100 -15.1 -4.53034 | gap 1, opp_overlap 694154 694149, overlap 694149 AAGTAAAAAATAAAA GATCGATAAAGATTAA-GTT ATTAA AACATTAATCTTTATCGATC TTTTGCTTGTATAAA def 694792 - 694232 - | peptide deformylase LSL_0650 694948 - 695832 + | lactate/malate dehydrogenase LSL_0651 695843 - 696118 + | hypothetical protein TERM 759 696525 - 696539 + G 71 -6.4 -4.15788 | overlap 696538 TATATTGGGGTGGAC CGGTAT ATG ATGCCG TTTATTGCAACGATT LSL_0652 696128 - 696907 + | myo-inositol-1(or 4)-monophosphatase TERM 760 696919 - 696938 + F 78 -5.8 -4.81551 | gap 1, opp_overlap 696918 696919, overlap 696919 696920 ATAGATAAGAGTAAG T-CTGTGGT TGA ACCACAGCA TTTTTAATATAAGTA TERM 761 696920 - 696936 + F 82 -10.9 -2.68202 | opp_overlap 696918 696919, overlap 696919 696919 TAGATAAGAGTAAGT CTGTGGT TGA ACCACAG CATTTTTAATATAAG TERM 762 698799 - 698816 + G 73 -7.1 -4.07885 | opp_overlap 698799 TTACACCAGAATCCA TACGTTT ACGT AAACGTA TTTTGGAAACAAATG typA 697034 - 698875 + | GTP-binding protein TERM 763 698878 - 698915 + F 87 -10.1 -3.88787 | opp_overlap 698878 698887, overlap 698887 AGCAACAGAATAATA TAGAAAAAAGCTCGTAA GTAT TTACGGGCTTTTTCTTA TTTATACGGATATAA TERM 764 698915 - 698878 - f 73 -7.9 -3.57523 | opp_overlap 698878 698887, overlap 698887 AGCAACAGAATAATA TAGAAAAAAGCTCGTAA GTAT TTACGGGCTTTTTCTTA TTTATACGGATATAA TERM 765 698906 - 698887 - f 88 -6.4 -5.48787 | opp_overlap 698878 698887, overlap 698878 ATAATATAGAAAAAA GCTCGTAA GTAT TTACGGGC TTTTTCTTATTTATA TERM 766 698887 - 698906 + F 100 -8.6 -5.42164 | opp_overlap 698887 698878, overlap 698878 ATAATATAGAAAAAA GCTCGTAA GTAT TTACGGGC TTTTTCTTATTTATA TERM 767 700037 - 700019 - g 72 -8.2 -3.38046 | overlap 700017 CTTTTATTTGAAACA CCTCAAGA TGC TCTTGAAG CAATTAAAGGTGGCG TERM 768 700051 - 700073 + G 79 -9.2 -3.38088 | AGCAATTAAAGGTGG CGTTGATATC AAA GAAATCAACG TTGGTTCAATGGCTT manX 699278 - 700270 + | PTS system, mannose-specific IIAB component LSL_0655 700291 - 701091 + | PTS system, mannose-specific IIC component LSL_0656 701112 - 702032 + | PTS system, mannose-specific IID component TERM 769 702054 - 702073 + F 90 -5 -5.75599 | opp_overlap 702054 AATTAATTTAAGAAA GATAGGTT TTAT ACCCTATC TTTTTTTGTAGTTTA ftsW 702331 - 703530 + | cell division protein TERM 770 706944 - 706958 + G 80 -7.2 -4.4634 | TAAAAATGGCGATGT TCTTGA AAG TCAAGA TTTATTATTGGAATT pycA 703561 - 706986 + | pyruvate carboxylase TERM 771 707001 - 707022 + F 100 -9.5 -5.40004 | opp_overlap 707001 ATAATCATTTTAGAA GTGGGAAGA AGTT TCTTCTCAC TTTTTTAATTTCATA TERM 772 707023 - 707050 + F 80 -5.8 -5.10497 | overlap 707025 GAAGTTTCTTCTCAC TTTTTTAATTTC ATAT GGAATTAAAAGA TTTTTTCACTGAATT LSL_0659 707146 - 707424 + | hypothetical protein LSL_0660 707435 - 707995 + | methyltransferase coaD 707998 - 708480 + | phosphopantetheine adenylyltransferase TERM 773 708961 - 708947 - g 70 -7.2 -3.77241 | AAACGTTAATGGAAA GCATTA TAG TAATGC TACAGGATATCAAAA lon 708477 - 709511 + | ATP-dependent protease La TERM 774 709554 - 709518 - f 100 -12.6 -4.03696 | opp_overlap 709518 AATAATTAGTATAAA TGGCGTTATAAAGATT GAAGA AATCTTTATAACGTCA TTTTTTTGCGAATTA TERM 775 709518 - 709554 + F 100 -14.8 -5.43866 | opp_overlap 709518 AATAATTAGTATAAA TGGCGTTATAAAGATT GAAGA AATCTTTATAACGTCA TTTTTTTGCGAATTA purC 709824 - 710537 + | phosphoribosylamidoimidazole-succinocarboxamide synthase purS 710556 - 710804 + | phosphoribosylformylglycinamidine synthase purQ 710804 - 711478 + | phosphoribosylformylglycinamidine synthase I TERM 776 712696 - 712674 - g 71 -3.4 -5.09221 | GATAATAAAAATAAA GATACTTGGG TAC CACAATTATC TAGTGCAAAAGAGAC purL 711480 - 713705 + | phosphoribosylformylglycinamidine synthase II purF 713681 - 715132 + | amidophosphoribosyltransferase purM 715133 - 716170 + | phosphoribosylaminoimidazole synthetase purN 716183 - 716770 + | phosphoribosylglycinamide formyltransferase purH 716782 - 718320 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase purD 718337 - 719593 + | phosphoribosylamine--glycine ligase TERM 777 719610 - 719633 + F 93 -6.1 -5.52347 | opp_overlap 719610 719612 TATAATATAGCAAAA GTTGTACAA TTATGT TTGTACAGC TTTTTTAATTTTATT LSL_0672 719767 - 720840 + | hypothetical protein TERM 778 720891 - 720851 - T 100 -12.8 -4.91712 | opp_overlap 720851 TTTAATGTATAAAAA TACCCTCTAAGTATGCCA ACATA CAGCATATTTAGAGGGTA TTTAATTGCAGATAA TERM 779 720851 - 720891 + T 100 -13.6 -3.91084 | opp_overlap 720851 TTTAATGTATAAAAA TACCCTCTAAGTATGC CAACATACA GCATATTTAGAGGGTA TTTAATTGCAGATAA cls 722400 - 720907 - | cardiolipin synthetase LSL_0674 722513 - 723400 + | LysR family transcriptional regulator TERM 780 723414 - 723448 + T 74 -6.6 -4.22883 | gap 1, opp_overlap 723402 723414 AGAGATAGAATAAAA GCTCATCTATTTCCT AGGTAA AGGAT-TAGATGAGC TTATTTTCAATCCTC TERM 781 723448 - 723414 - T 83 -6.6 -4.88495 | gap 1, opp_overlap 723414, overlap 723402 AGAGATAGAATAAAA GCTCATCTATTTCCT AGGTAA AGGAT-TAGATGAGC TTATTTTCAATCCTC LSL_0675 723862 - 723653 - | hypothetical protein LSL_0676 724619 - 723930 - | HAD superfamily hydrolase TERM 782 724957 - 724980 + H 100 -10.4 -5.98675 | GCGGGAATTTCTCGT CTCTTGCATA TTAT TATGCAGGAG TTTTTTATTTTTATA argS 725008 - 726699 + | arginyl-tRNA synthetase TERM 783 726713 - 726732 + F 100 -8.6 -5.9667 | opp_overlap 726713 726716 AATTTATATTTTAAA CAAGTCTC AATG GAGGCTTG TTTTTTTGTATTTTT TERM 784 726853 - 726835 - g 78 -2.4 -5.58522 | overlap 726836 GAGATAAAAGAAAAA CTTCAAGA GTT TCTAGAAA ATAATAAATGGCAAA comEA 726811 - 727500 + | ComE operon protein 1 comEB 727544 - 728020 + | ComE operon protein 2 TERM 785 729265 - 729275 + G 76 -4 -5.36689 | opp_overlap 729265 TGTATTCTCAAAAAT TAGT AAT ACTA TTTTGTTTTTAATTT TERM 786 729429 - 729412 - g 72 -2.7 -5.32882 | TAGCAGGAGAAAAAA TGTAGTT ATTT ATCTACA AGTATTGGTATACAT LSL_0680 728033 - 730294 + | ComE operon protein 3 TERM 787 730479 - 730502 + G 87 -9.6 -4.06719 | opp_overlap 730473 730493, overlap 730493 TGGAAACTACTTCGA TTGCAACTGC AATA GCAGATGCAA TTTCTGCTCCTTTTT holA 730304 - 731326 + | DNA polymerase III subunit delta TERM 788 731354 - 731324 - T 100 -12.8 -5.252 | opp_overlap 731324 TATGCGTATAAAAAA TAAAGGTTGGGATT AAA AATCTCAACCTTTA TTTTTTAATAACTCA TERM 789 731324 - 731354 + T 100 -15 -5.1675 | opp_overlap 731324 TATGCGTATAAAAAA TAAAGGTTGGGATT AAA AATCTCAACCTTTA TTTTTTAATAACTCA LSL_0682 732391 - 731345 - | isopentenyl pyrophosphate isomerase TERM 790 732306 - 732325 + g 72 -8 -3.36823 | TAAATTAATTGCACT TCATCTAA CTGA TTAGATGA TTGAGTTTTAAAAAA LSL_0683 733474 - 732407 - | phosphomevalonate kinase TERM 791 732434 - 732446 + g 73 -4.1 -4.88918 | overlap 732429 AACGTGCAATGATAA TGGGA CTA TTCCA TTTTCTTTCCAATAA TERM 792 733299 - 733324 + g 89 -10.7 -3.59315 | opp_overlap 733304, overlap 733302 TTACCTTCTCGTTTC CAATATAAAGA ATTT TCTTTATATTG TTTAGAAATGATTGA LSL_0684 734467 - 733499 - | diphosphomevalonate decarboxylase TERM 793 733600 - 733574 - G 76 -6.6 -4.56775 | opp_overlap 733580 ATTTTTTTGTAAAAA GGAAGTGATACT AGC AGTATCTTTTCC TAGACAAATAATTTT TERM 794 733580 - 733594 + g 75 -7.2 -4.25283 | opp_overlap 733574 TTGTAAAAAGGAAGT GATACT AGC AGTATC TTTTCCTAGACAAAT eRG 735424 - 734480 - | mevalonate kinase TERM 795 736609 - 736584 - g 71 -3.4 -5.10461 | GCTACTGAAGAAAAA GTTGTAATAA GTACAG CTACTACAAC TTTACAAAATCAGTT dinG 735672 - 738461 + | ATP-dependent helicase DinG LSL_0687 738585 - 739088 + | hypothetical protein TERM 796 740028 - 740010 - g 73 -4.6 -5.00923 | AAAGATTAAATAAAA TCTATAAG AAA CTTAAAGA AATTCCGGGATTTGT LSL_0688 739106 - 740287 + | aspartate aminotransferase asnC 740300 - 741601 + | asparaginyl-tRNA synthetase TERM 797 741608 - 741646 + F 74 -7.7 -3.85504 | gap 1, opp_overlap 741616, overlap 741617 TACCCATAAATTTAT TTTGAAGAGGTCTGATGA ATTT TCATCGG-CCTTTTTAAA TTGCTTTTTAATAGT TERM 798 741617 - 741638 + F 72 -5.1 -4.788 | opp_overlap 741616, overlap 741608 ATTTATTTTGAAGAG GTCTGATGA ATTT TCATCGGCC TTTTTAAATTGCTTT LSL_0690 741709 - 742416 + | DNA replication protein dnaD TERM 799 742516 - 742526 + G 79 -5.4 -5.12971 | overlap 742511 CATTAATAGCTGATA GTGA TTA TCAC TTTTTATTAGCTGTT nth 742431 - 743072 + | endonuclease III msrA 743128 - 743646 + | peptide methionine sulfoxide reductase LSL_0693 743670 - 744542 + | hypothetical protein TERM 800 744550 - 744577 + F 80 -6.4 -4.76644 | gap 1, opp_overlap 744550 GTATGTAAAAAAGAG GAGTAGG-GATGG TTT TCATTTCCTACTC TTTTTAGTAGATATT LSL_0694 744613 - 745620 + | hypothetical protein rfaG 745617 - 746408 + | glycosyltransferase TERM 801 747253 - 747237 - g 79 -8.1 -4.07868 | TTATATTGATACAAA TTTTCCA AAT TGGAAAA GAAATAAATATCTCA rfaG 746395 - 747342 + | glycosyltransferase LSL_0697 747358 - 747543 + | hypothetical protein LSL_0698 747546 - 747731 + | hypothetical protein TERM 802 747774 - 747736 - T 100 -14.9 -3.49738 | opp_overlap 747729 747736, overlap 747728 747739 AAGATAAGTAAGGAA GAACCTTGTAATTGTTG GAAAT CAAAAATTACAAGGTTC TTTTTGATATACAAA TERM 803 747736 - 747774 + T 100 -15.6 -4.8048 | opp_overlap 747736 747728 747739, overlap 747729 AAGATAAGTAAGGAA GAACCTTGTAATTGTTGG AAA TCAAAAATTACAAGGTTC TTTTTGATATACAAA TERM 804 747771 - 747739 - T 90 -10.8 -3.86634 | opp_overlap 747729 747736, overlap 747736 747728 ATAAGTAAGGAAGAA CCTTGTAATTGTTG GAAAT CAAAAATTACAAGG TTCTTTTTGATATAC TERM 805 747793 - 747823 + T 74 -7.7 -3.81428 | opp_overlap 747793 TTGATATACAAAAAA GCATAATATCGAT AATAC ATCGGAATTATGC TTTAGATTGCTTAAT TERM 806 747823 - 747793 - T 88 -6.2 -5.4251 | opp_overlap 747793 TTGATATACAAAAAA GCATAATATCGATA ATA CATCGGAATTATGC TTTAGATTGCTTAAT LSL_0699 748646 - 747834 - | hypothetical protein TERM 807 748074 - 748090 + g 74 -6.7 -4.4448 | GCCGAAGATACGTTT TTTATCA ACT TGATAAA TTTCTTTAGGAATTT TERM 808 748635 - 748625 - G 72 -2.6 -5.27206 | CAGAGATAACAAAAA TATT AGT AATA GAATCAGACATATTA rpsU 748897 - 749082 + | 30S ribosomal protein S21 LSL_0701 749101 - 749544 + | GatB/Yqey domain-containing protein TERM 809 749560 - 749582 + F 100 -7.8 -5.75599 | TAATTACTCGATTTA CTACCACA TTATATT TGTGGTAG TTTTTTTATGCTTTC LSL_0702 749646 - 749789 + | hypothetical protein TERM 810 749834 - 749862 + T 82 -6.2 -4.99435 | opp_overlap 749834 ACATACATATAAAAA TGACAAGATT TTGCAATTT AATCTTGTCA TTTTTAGTTATTCGG TERM 811 749862 - 749834 - T 82 -6.2 -5.08178 | opp_overlap 749834 ACATACATATAAAAA TGACAAGATT TTGCAATTT AATCTTGTCA TTTTTAGTTATTCGG LSL_0703 750700 - 749870 - | integrase/recombinase xerD LSL_0704 751601 - 750705 - | hypothetical protein dapB 751777 - 752565 + | dihydrodipicolinate reductase pcnB 752562 - 753776 + | tRNA CCA-pyrophosphorylase TERM 812 754045 - 754063 + G 71 -7.4 -3.55622 | TATGGAAGCTATTTT TACTGGAG CTG CTCCTGTA TTTCAAACAATTAGA LSL_0707 753773 - 755680 + | ABC transporter, ATP-binding protein thyA 755698 - 756654 + | thymidylate synthase folA 756672 - 757175 + | dihydrofolate reductase TERM 813 757234 - 757189 - f 75 -4.9 -5.08088 | opp_overlap 757189 757197, overlap 757197 AATTTCTAATAAAAA TAATGAAAGATGAGTAAGACA ATTT TGTAGTACTCATCTTTTTTTA CATTTTTAAGGCTTA TERM 814 757197 - 757226 + F 93 -6.5 -5.63857 | opp_overlap 757189 757197, overlap 757189 ATAAAAATAATGAAA GATGAGTAAGACA ATTT TGTAGTACTCATC TTTTTTTACATTTTT TERM 815 757226 - 757197 - f 70 -6.5 -4.2711 | opp_overlap 757197 757189, overlap 757189 ATAAAAATAATGAAA GATGAGTAAGACA ATTT TGTAGTACTCATC TTTTTTTACATTTTT TERM 816 757258 - 757275 + F 93 -8.5 -4.79955 | opp_overlap 757253 AGGCTTAAATGTTGA CTTCAAG TTAA CTTGAAG TTTTATTATAGATAT LSL_0710 757352 - 758212 + | oxidoreductase LSL_0711 758214 - 758675 + | MerR family transcriptional regulator LSL_0712 758679 - 759635 + | oxidoreductase TERM 817 759663 - 759710 + T 74 -5.2 -4.8622 | gap 1, opp_overlap 759673, overlap 759665 ATAAGTAAAAAATAG GCGTCAATAAGATAATATATC AATAAAA GATATGT-ATCTTATTGGCAC TTTTTGGTTAAAAAA LSL_0713 760338 - 759718 - | hypothetical protein LSL_0714 760427 - 761356 + | lipase/acylhydrolase LSL_0715 761361 - 761960 + | hypothetical protein TERM 818 762140 - 762155 + G 77 -6.2 -4.7871 | opp_overlap 762135 762139, overlap 762135 TTGAATGGAACATAT TTACCA AGTA TGGTAA TTTTTGATAATGCTT LSL_0716 761972 - 762199 + | hypothetical protein LSL_0717 762258 - 763115 + | GTP-binding protein TERM 819 763843 - 763833 - g 80 -6.8 -4.64861 | GGCCTTGAAAATAAA GGAG TTA CTCC AATTCACAGACAAAG rnhB 763125 - 763892 + | ribonuclease HII TERM 820 763904 - 763949 + F 79 -3.5 -5.63504 | gap 1 ATAATACAAAGAAAA CCTTATTTCTAC-GTATCTTAT TAG ATAGATTGCAGTAGAAATGAGG TTTTTTTATGGAATT TERM 821 764044 - 764025 - g 73 -4.4 -5.00616 | gap 1 TGGTTCGGTAAAAAA CGTTGCATA TTT TATG-AACG AAATACAAAAATTAC LSL_0719 763957 - 764817 + | DNA processing protein TERM 822 765288 - 765269 - g 80 -2.8 -5.73672 | AAAGAAGCAAAAAAA GCTAGTCA TGTT TATCTAGC AGCCGATCCGGACCG TERM 823 766953 - 766942 - g 71 -3 -5.16151 | opp_overlap 766942 CAAATCTAAGAAAAA TAGA GTCT TCTA TGGTTGCTCATTGTA topA 765005 - 767116 + | DNA topoisomerase I LSL_0721 767139 - 768449 + | tRNA (uracil-5-)-methyltransferase Gid TERM 824 768458 - 768482 + F 85 -5 -5.64304 | opp_overlap 768458 TGACTAATTTATTAA GCCGTTAGAT GATAA GTCTAAAGGC TTTTTTATTGTATTA LSL_0722 768571 - 769974 + | PTS system, galactitol-specific IIC component TERM 825 769975 - 770025 + T 95 -11.6 -3.88618 | opp_overlap 769971 769975 769987, overlap 769987 AAAAATATAAATTAA TATAAATAAAAATTACTCAGATTT TTA AAGCCTGGGTAATTTTTATTTATC TTTCATAATTATATT TERM 826 770025 - 769975 - T 82 -9.4 -3.76387 | opp_overlap 769975 769987, overlap 769971 769987 AAAAATATAAATTAA TATAAATAAAAATTACTCAGATTT TTA AAGCCTGGGTAATTTTTATTTATC TTTCATAATTATATT TERM 827 769987 - 770013 + T 84 -5.2 -5.48623 | opp_overlap 769987 769975 769971, overlap 769975 TAATATAAATAAAAA TTACTCAGATTT TTA AAGCCTGGGTAA TTTTTATTTATCTTT TERM 828 770013 - 769987 - T 74 -3 -5.4659 | opp_overlap 769975 769987, overlap 769975 769971 TAATATAAATAAAAA TTACTCAGATTT TTA AAGCCTGGGTAA TTTTTATTTATCTTT LSL_0723 770634 - 770017 - | TetR family transcriptional regulator TERM 829 771291 - 771277 - g 79 -8.6 -3.84915 | overlap 771287 TAGATGAACCAACAA GTGGAT TAG ATCCAC TAATGGAGAGTATTT LSL_0724 770802 - 771686 + | ABC transporter, ATP-binding protein LSL_0725 771706 - 773310 + | ABC transporter permease TERM 830 773327 - 773347 + F 88 -6.2 -5.47431 | opp_overlap 773327 TAGTTAATTACAGAA CAGTTGGA TTTGT TTCAACTG TTTTTTATATATTAA TERM 831 773661 - 773644 - g 76 -4.1 -5.08601 | CTAGTCCAATAAAAA GAGCATT AGTA ACTGCTC AAAAAATAAAAGAAA gpmB 773469 - 774125 + | phosphoglycerate mutase LSL_0727 774141 - 774809 + | TPR repeat-containing protein recD 774802 - 777276 + | exodeoxyribonuclease V alpha chain TERM 832 777487 - 777509 + T 90 -9.1 -4.73682 | opp_overlap 777487, overlap 777484 CTTATAAAGAATGTA GGGTCTGCC TTATT GGCAGGCTC TTTTATCTTATAAAA TERM 833 777630 - 777595 - T 100 -7.8 -5.79588 | opp_overlap 777595 TGAAAACTAAAAAAA CACTTACAAACGTTAT TAAG ACAAGGTTTATAAGTG TTTTTAAAATTATTT TERM 834 777769 - 777780 + T 71 -3 -5.22006 | overlap 777765 TTATTGTTATTTTAA TAGT TAAT ACTA TTTTTCTTATCATCA xerC 778886 - 777765 - | Phage integrase TERM 835 778703 - 778689 - G 73 -8.6 -3.33419 | AGTCTCAAACCAAGA CCAGAA GTA TTCTGG AAAGGGTGTCTTTGA LSL_0730 779087 - 778905 - | hypothetical protein TERM 836 779017 - 779034 + g 82 -3.5 -5.64006 | gap 1, opp_overlap 779017 779020, overlap 779020 CTTCTAGATGTTAAA TAG-GAAC GAT GTTCTCTA TTTTTTTCATTCCAT LSL_0731 779368 - 779231 - | hypothetical protein TERM 837 779517 - 779462 - R 79 -6.6 -4.57341 | gap 1, opp_overlap 779468 779469, overlap 779469 AAGTTGTTGTAAAAA TATGAAAGTGTAACAGATTGTAACA GATAGGG TGTTTTAATCTGTTACACCTT-ATA AACGTTGATATAATA TERM 838 779468 - 779512 + r 71 -8.1 -3.33737 | opp_overlap 779462 779469, overlap 779469 TTGTAAAAATATGAA AGTGTAACAGATTGTAACA GATAGGG TGTTTTAATCTGTTACACC TTATAAACGTTGATA TERM 839 779511 - 779469 - R 86 -9.4 -4.13748 | opp_overlap 779469 779468, overlap 779462 TGTAAAAATATGAAA GTGTAACAGATTGTAACA GATAGGG TGTTTTAATCTGTTACAC CTTATAAACGTTGAT TERM 840 779469 - 779511 + r 86 -11.6 -2.59921 | opp_overlap 779462 779469, overlap 779468 TGTAAAAATATGAAA GTGTAACAGATTGTAACA GATAGGG TGTTTTAATCTGTTACAC CTTATAAACGTTGAT TERM 841 779745 - 779735 - R 82 -2.6 -5.9218 | TATATAATAAAAAAA TATA TAA TATA GGGGGTCTAAAAGTC TERM 842 779925 - 779959 + r 74 -2.9 -5.45802 | gap 1, overlap 779918 TGACTGTCTTGATAG CACCTATCC-ATTTAG TGTA CAGACTTGGATAGGTG TTTTTATTTTCCAAA TERM 843 780083 - 780052 - R 74 -3.1 -5.5074 | CAATGTAATAAAAAA GAACAACTGAC GATACACAGA ATCAGCTGTTC TAAAATAACCAATAT TERM 844 780121 - 780137 + r 86 -9.5 -4.0075 | opp_overlap 780124, overlap 780124 TGGGTCTCTATTAGC TAACGGT CTT ACCGTTA TTTCCTTAATTCAAT TERM 845 780124 - 780134 + r 71 -6.8 -4.12043 | opp_overlap 780124, overlap 780121 GTCTCTATTAGCTAA CGGT CTT ACCG TTATTTCCTTAATTC TERM 846 780284 - 780263 - R 100 -14.5 -3.5393 | ATGATTTGGCGTAAA TCCCCTCAC TTTA GTGAGGGGA TGGATAGCCTAAGCT TERM 847 780300 - 780318 + r 100 -7.5 -5.38951 | TGGATAGCCTAAGCT TAGGACT AGTAG AGTCCTA TTTTTTGTATGCATT LSL_0732 780747 - 780316 - | IS200/IS605 family transposase TERM 848 781487 - 781474 - g 84 -5.3 -5.42259 | opp_overlap 781474 CCATTTGTAAAAAAA TTAGC GAAA GCTAA TTCTCAAGTTGGTGT LSL_0733 780847 - 782124 + | IS200/IS605 family transposase TERM 849 782121 - 782106 - f 100 -7.6 -5.56112 | AGAAAAACCAAAAAA CTTAGC TAAA GCTAAG TAAAGGGTGCGTTTG LSL_0734 782443 - 782880 + | hypothetical protein TERM 850 782902 - 782918 + T 74 -6.5 -4.37527 | TTCTTAACAGGTTTA GGAGCAG GAG CTGGTCC TTTTCCTCGTTCTGG LSL_0735 783053 - 782877 - | hypothetical protein LSL_0736 783458 - 783066 - | hypothetical protein LSL_0737 783682 - 783539 - | hypothetical protein TERM 851 783777 - 783801 + r 84 -6.5 -5.17744 | opp_overlap 783777 CAGTATATTAAATAA GTCGTACAT GAGTTAA GTGTACGAC TTTTTGTTAATATGT LSL_0738 784106 - 783816 - | hypothetical protein LSL_0739 784286 - 784134 - | hypothetical protein LSL_0740 784957 - 784307 - | Phage super infection exclusion TERM 852 784654 - 784675 + g 77 -3.1 -5.39721 | gap 1, overlap 784644 784656 784657 ATTTAGCAGATGATT GCTTAGTTTT AAT AGAACT-AGC TTTTTTCTCTGATAA LSL_0741 785289 - 784990 - | phage cI like repressor LSL_0742 785821 - 785426 - | Cro/CI family phage transcriptional regulator LSL_0743 785875 - 786024 + | hypothetical protein LSL_0744 786003 - 786353 + | Phage antirepressor LSL_0745 786366 - 786497 + | Phage antirepressor LSL_0746 786513 - 786944 + | Phage antirepressor LSL_0747 787035 - 787229 + | hypothetical protein LSL_0748 787204 - 787515 + | hypothetical protein LSL_0749 787622 - 787795 + | hypothetical protein LSL_0750 787868 - 788026 + | hypothetical protein TERM 853 788271 - 788229 - g 100 -13.8 -5.50925 | overlap 788257 AATCAAGATAAAAAA GAAACATTTGTCTTACCAGT TAA ACCAATAAAACAAATGTTTC AATCAATAAATCATC LSL_0751 788013 - 788600 + | hypothetical protein LSL_0752 788674 - 789897 + | Phage helicase LSL_0753 789869 - 790102 + | hypothetical protein LSL_0754 790099 - 790413 + | hypothetical protein TERM 854 790554 - 790570 + G 70 -7.3 -3.83205 | GGTGGTGGATTTCAA TCAGGAG GAA TTCCTGA TTTAATCTGCAACAT LSL_0755 790413 - 790826 + | hypothetical protein TERM 855 791275 - 791258 - g 75 -7.1 -4.17186 | overlap 791255 CAAAAGAAAACAGAA TCTGAAT ATCA ATTCAGA CAACGATTAAAACGA LSL_0756 790877 - 792457 + | Phage NTP-binding protein TERM 856 792635 - 792616 - g 72 -5.1 -4.74103 | GTTTCAATCGAAAAA TTAGAAG CTACAT CTTCTAA AAAAGGCGATCCAAT LSL_0757 792478 - 792945 + | hypothetical protein TERM 857 793101 - 793086 - f 70 -6.2 -4.20918 | GTTAAGGTTAATAAA CTGTTA TTAC TAACAG TCAAAGTGAAATGAG TERM 858 794376 - 794359 - g 70 -4.1 -4.72272 | CGTGTTTACCAAAAA GACGTTA ATAA TTACGTC ATGATTGGAACTGAT LSL_0758 793126 - 794823 + | Phage DNA polymerase LSL_0759 794824 - 795855 + | Phage primase TERM 859 796195 - 796205 + G 74 -5.4 -4.78848 | opp_overlap 796195 ACGGCTGAACGTAAA GGAT TAG ATCC TTTTATGTTTGAAAA LSL_0760 795859 - 796728 + | Phage DNA primase LSL_0761 796744 - 796968 + | hypothetical protein LSL_0762 796988 - 797215 + | hypothetical protein LSL_0763 797363 - 797617 + | hypothetical protein LSL_0764 797586 - 798197 + | hypothetical protein xerC 798199 - 799146 + | Phage integrase LSL_0766 799143 - 799535 + | hypothetical protein LSL_0767 799558 - 800211 + | hypothetical protein LSL_0768 800204 - 800512 + | hypothetical protein LSL_0769 800529 - 800840 + | hypothetical protein LSL_0770 800941 - 801201 + | hypothetical protein LSL_0771 801239 - 801547 + | hypothetical protein TERM 860 801596 - 801615 + G 74 -9.4 -3.09727 | opp_overlap 801594 801593 801605, overlap 801595 TCAAGTTGGAAATGT TATCAGAG ATAT CTCTGATA CTTTATATCTAGTTG LSL_0772 801537 - 801773 + | hypothetical protein LSL_0773 801783 - 801941 + | hypothetical protein LSL_0774 801954 - 802172 + | hypothetical protein LSL_0775 802633 - 802767 + | hypothetical protein LSL_0776 802779 - 803021 + | hypothetical protein LSL_0777 803086 - 803373 + | hypothetical protein LSL_0778 803386 - 803703 + | hypothetical protein TERM 861 804097 - 804107 + F 82 -2.6 -5.9218 | GAGTTTGAGTCGCCC TATA TTA TATA TTTTTTTATTATATA LSL_0779 804340 - 804759 + | hypothetical protein TERM 862 804945 - 804988 + F 100 -14.2 -5.63517 | opp_overlap 804946, overlap 804946 ATTTGTTCATTTAAG ACTAGAGTTCTTGAAGTA TTTGATGT TACTTCAAGAACTCTAGC TTTTTTGTTTGGAAA TERM 863 804987 - 804946 - f 100 -17.7 -3.08679 | opp_overlap 804945 804946 TTTGTTCATTTAAGA CTAGAGTTCTTGAAGTA TTTGATGT TACTTCAAGAACTCTAG CTTTTTTGTTTGGAA TERM 864 804946 - 804987 + F 100 -17.7 -3.97026 | opp_overlap 804946, overlap 804945 TTTGTTCATTTAAGA CTAGAGTTCTTGAAGTA TTTGATGT TACTTCAAGAACTCTAG CTTTTTTGTTTGGAA LSL_0780 805018 - 805248 + | hypothetical protein mcrA 805250 - 805576 + | Phage endonuclease TERM 865 805733 - 805720 - g 80 -6.7 -4.8269 | opp_overlap 805719 CACAAGTAGCAAAAA GTGCA ATGA TGCAC CTATATGAAGGAAAT TERM 866 805820 - 805802 - g 90 -8.2 -4.85618 | overlap 805794 AAAGAACGAAGAAAA GTTGAAAG TTT CTTCCAAC AACTTAAATCCACCT LSL_0782 805701 - 806153 + | Phage terminase small subunit TERM 867 806533 - 806551 + G 71 -3.1 -5.15167 | overlap 806527 GATACAGGCCTAAGA CGATTCC GTGAA GGAGTTG TTTTTGTTGGTCGTA LSL_0783 806143 - 807909 + | terminase large subunit LSL_0784 807922 - 809166 + | portal protein clpP 809102 - 809851 + | ATP-dependent Clp protease proteolytic subunit LSL_0786 809848 - 810978 + | Phage prohead protease LSL_0787 811170 - 811490 + | Phage DNA packaging LSL_0788 811480 - 811824 + | Phage head-tail joining protein LSL_0789 811836 - 812258 + | Phage head-tail joining protein LSL_0790 812255 - 812626 + | Phage head-tail joining protein TERM 868 812664 - 812683 + G 83 -7.2 -4.70169 | overlap 812657 TAAATTTGCAATTGG TACGGTTG GTTT CAATCGTA TTTTGTTCGGTATCA LSL_0791 812638 - 813288 + | Phage major tail protein LSL_0792 813285 - 813674 + | hypothetical protein LSL_0793 813722 - 813847 + | hypothetical protein LSL_0794 813863 - 817687 + | Phage tail tape mesure protein LSL_0795 817699 - 818514 + | hypothetical protein TERM 869 818651 - 818691 + G 77 -3.3 -5.48825 | overlap 818653 AACTGCATATAATGA CGGAAGCTTAGCTTATCAA ATG TTGGAAAGTGAAGCTTCTA TTTTTTTGGATAATC TERM 870 818653 - 818689 + G 83 -8.1 -4.37763 | overlap 818651 CTGCATATAATGACG GAAGCTTAGCTTATCAA ATG TTGGAAAGTGAAGCTTC TATTTTTTTGGATAA LSL_0796 818514 - 820364 + | hypothetical protein LSL_0797 820368 - 821126 + | Phage lysin LSL_0798 821278 - 821556 + | hypothetical protein TERM 871 822526 - 822510 - g 80 -9.5 -3.61654 | opp_overlap 822508 TACATGGATGCTAAA CCATACT ACA AGTATGG AGATTGGTATTTAGG LSL_0799 821556 - 822632 + | Phage minor head protein LSL_0800 822713 - 823108 + | hypothetical protein LSL_0801 823123 - 823524 + | hypothetical protein LSL_0802 823526 - 823708 + | hypothetical protein TERM 872 823786 - 823824 + G 100 -9.7 -4.57837 | gap 1 TATTAGGATATTCAT GGGCGGAGATAG-CGTCA ATTC TGGCGGTTATTTCCGTCC TTTTTAGCGGGGTGT LSL_0803 823761 - 824066 + | hypothetical protein LSL_0804 824063 - 824389 + | hypothetical protein TERM 873 824432 - 824448 + G 85 -4.4 -5.71712 | TATTAATTACTTTAG CAACGT GTGCA GCGTTG TTTTTTTCTGTGCAG LSL_0805 824401 - 825669 + | Phage lysin TERM 874 825679 - 825698 + F 95 -5.7 -5.8901 | opp_overlap 825679 ATATAGACTATTAAA GCTAGGA TTAATT TCCTGGC TTTTTTATTTTGTCT TERM 875 825757 - 825743 - f 77 -4.4 -5.22006 | TGATGATAAGAAAAA TTATAT TTA ATATAA CTAATAACTTTATAA TERM 876 825782 - 825818 + F 100 -11.1 -4.16121 | opp_overlap 825782, overlap 825786 TTATAAAACAAAAAA TAAACCACATGATATTG CCT TGATACCATGTGGTTTA TTTGTACTCTTTTTG TERM 877 825818 - 825782 - f 100 -11.9 -5.86976 | opp_overlap 825782 825786 TTATAAAACAAAAAA TAAACCACATGATAT TGCCTTG ATACCATGTGGTTTA TTTGTACTCTTTTTG TERM 878 825786 - 825814 + F 82 -7.5 -4.61852 | opp_overlap 825782, overlap 825782 AAAACAAAAAATAAA CCACATGATATTG CCT TGATACCATGTGG TTTATTTGTACTCTT TERM 879 825924 - 825889 - f 100 -8.6 -6.02919 | gap 1, opp_overlap 825889, overlap 825891 TCAGAAACAAAAAAA CACCTATAAACGTT-AT TAT ATCAACGTTTATAGGCA ATTTTAAAATTATTT TERM 880 825922 - 825891 - f 100 -11.2 -4.6372 | gap 1, opp_overlap 825889, overlap 825889 AGAAACAAAAAAACA CCTATAAACGTT-AT TAT ATCAACGTTTATAGG CAATTTTAAAATTAT LSL_0806 826208 - 826369 + | hypothetical protein LSL_0807 826720 - 826349 - | hypothetical protein LSL_0808 826834 - 826724 - | hypothetical protein LSL_0809 826829 - 826981 + | hypothetical protein spoU 826972 - 827733 + | 23S rRNA methyltransferase LSL_0811 827842 - 828366 + | HD superfamily hydrolase TERM 881 828394 - 828419 + F 80 -6.2 -4.76213 | overlap 828397 TTAGGGCAGTATTAG TGGCCTTTGC TATGAT GCAAAGGTTA TTTTGTTAGATTTAT TERM 882 828397 - 828416 + F 82 -7.9 -4.45817 | overlap 828394 GGGCAGTATTAGTGG CCTTTGC TATGAT GCAAAGG TTATTTTGTTAGATT LSL_0812 828491 - 828838 + | MarR family transcriptional regulator TERM 883 829119 - 829146 + F 100 -13.5 -5.63517 | overlap 829114 AGGGTGGTACCGCGA GCCTCGTCCCT TTTGGT AGGGATGAGGC TTTTTTATTTGAAAA pheS 829184 - 830230 + | phenylalanyl-tRNA synthetase alpha chain pheT 830237 - 832654 + | phenylalanyl-tRNA synthetase subunit beta TERM 884 832669 - 832699 + F 91 -8.4 -5.07107 | AGATTAAGTACAGAG TGTCGTTGAATCAA GAA TAGATTTGACGACA TTTTTTGAGAGTTTA LSL_0815 832807 - 833946 + | hypothetical protein udk 833969 - 834610 + | uridine kinase greA 834627 - 835097 + | transcription elongation factor TERM 885 835116 - 835163 + T 82 -7.5 -4.52589 | gap 2, opp_overlap 835114 835116 835122, overlap 835122 ACGAATAAAGAATTA TGAAAATCATAGCC-TCTA-TCA ATTT TGAATAGATGGTTATGATTTTTA TTTTATATAGAAAAA TERM 886 835122 - 835157 + T 83 -4.3 -5.58522 | gap 2, opp_overlap 835114 835122 835116, overlap 835116 AAAGAATTATGAAAA TCATAGCC-TCTA-TCA ATTT TGAATAGATGGTTATGA TTTTTATTTTATATA TERM 887 835177 - 835225 + T 74 -5.5 -4.81212 | gap 1, opp_overlap 835181, overlap 835181 835185 TATTTTATATAGAAA AAAATAAAGCCCAG-GTATATC TTAATT GATATACTCTGGGCTTTATCAC TTTTCTTATAGTAAG TERM 888 835221 - 835181 - T 100 -15.1 -5.76633 | gap 1, opp_overlap 835177 835181 835185 TTATATAGAAAAAAA TAAAGCCCAG-GTATATC TTAATT GATATACTCTGGGCTTTA TCACTTTTCTTATAG TERM 889 835181 - 835221 + T 100 -15.1 -2.87028 | gap 1, opp_overlap 835181, overlap 835177 835185 TTATATAGAAAAAAA TAAAGCCCAG-GTATATC TTAATT GATATACTCTGGGCTTTA TCACTTTTCTTATAG TERM 890 835185 - 835217 + T 100 -11.5 -4.08689 | gap 1, opp_overlap 835181, overlap 835181 835177 ATAGAAAAAAATAAA GCCCAG-GTATATC TTAATT GATATACTCTGGGC TTTATCACTTTTCTT LSL_0818 835581 - 835231 - | hypothetical protein uRH 836567 - 835605 - | inosine-uridine preferring nucleoside hydrolase LSL_0820 836837 - 837334 + | hypothetical protein TERM 891 838801 - 838817 + G 77 -5.9 -4.77036 | opp_overlap 838801 TTTAAATAAGAAACC TAGCGAT ATT ATTGCTA TTTTTGGTCCTGAGG LSL_0821 838241 - 838972 + | hypothetical protein relA 839012 - 841231 + | GTP pyrophosphokinase dtd 841246 - 841692 + | D-tyrosyl-tRNA deacylase LSL_0824 841697 - 842311 + | phosphoglycolate phosphatase TERM 892 842319 - 842350 + F 93 -9.6 -4.72272 | opp_overlap 842318 TGAAGTAAATTAACT TGAGTCATATTACT TAGA GGTTATATGACTCA TTTTTGATAGGAAAG lspA 842378 - 842824 + | lipoprotein signal peptidase rluD 842817 - 843713 + | ribosomal large subunit pseudouridine synthase D TERM 893 843835 - 843860 + F 100 -9.8 -5.42198 | ATGAAATTAATACGC GGACTAGGAC TGATTT GTTCTAGTCC TTTTATTTTTTCAGC pyrR 843921 - 844457 + | pyrimidine regulatory protein PyrR TERM 894 845068 - 845078 + G 70 -4 -4.98616 | opp_overlap 845068 ACTTTTAGGTATAAT TGTA GGC TACA TTTTTGCTGTTTTCA TERM 895 845435 - 845445 + G 74 -6.8 -4.27911 | overlap 845431 AGTGTTTGGGTGCTT GCAG GAG CTGC TTTCTTCGCTATTTT uraA 844484 - 845791 + | Uracil permease carA 845853 - 846953 + | carbamoylphosphate synthase small subunit pyrF 848859 - 849572 + | orotidine 5'-phosphate decarboxylase pyrE 849572 - 850192 + | orotate phosphoribosyltransferase LSL_0832 850307 - 851263 + | LysR family transcriptional regulator ppa 851289 - 852209 + | putative manganese-dependent inorganic pyrophosphatase TERM 896 852239 - 852280 + F 100 -11.9 -5.80364 | opp_overlap 852239 ATATATTTTTAAAAG TACCTTGTAGTTATTGGTT AGAG AGCTAATAGCTATAAGGTA TTTTTTTATTAGAAT LSL_0834 852396 - 853148 + | DeoR family transcriptional regulator araT 853208 - 854371 + | aromatic amino acid aminotransferase murI 854441 - 855211 + | glutamate racemase TERM 897 855216 - 855255 + F 100 -15.4 -5.07011 | gap 1, opp_overlap 855216 TTAACTTGTAAAAAA GATCGATTAGTG-TAATTG ACA CAATTAACGCTAATCGATC TTTTTAATTTATGTA TERM 898 855255 - 855216 - f 100 -13.2 -5.055 | gap 1, opp_overlap 855216 TTAACTTGTAAAAAA GATCGATTAGTG-TAATTG ACA CAATTAACGCTAATCGATC TTTTTAATTTATGTA LSL_0837 855420 - 856106 + | hypothetical protein TERM 899 856131 - 856155 + F 77 -4.4 -5.17744 | gap 1, opp_overlap 856131 TTATGTAAAATAAAG TGCAATCAACT GAAA AGT-GGTTGCA TTTTTATTAATGTAT divIVA 856226 - 856570 + | cell division initiation protein DivIVA TERM 900 856982 - 857011 + F 100 -7.9 -5.80951 | TTACATATCAGGGTG GCTAGGATATTAG GTAA CTTCTATCCTAGC TTTTTTATTTTAGAT LSL_0839 857052 - 858182 + | hypothetical protein LSL_0840 858565 - 858179 - | ribonuclease HI / cell wall enzyme EBSB LSL_0841 858592 - 858966 + | hypothetical protein TERM 901 858964 - 858989 + F 100 -10.7 -5.47159 | opp_overlap 858964 AATAATATGGCTAAA TAGGTATATAA TTCG TTATATACCTA TTTTTATTTGTTAAA TERM 902 858989 - 858964 - f 87 -10.7 -3.62176 | opp_overlap 858964 AATAATATGGCTAAA TAGGTATATAA TTCG TTATATACCTA TTTTTATTTGTTAAA fhs 859086 - 860744 + | formate--tetrahydrofolate ligase TERM 903 860883 - 860907 + G 80 -7.2 -4.61873 | gap 1, opp_overlap 860883 860882 CTCAACTACGTAAAG GCTCTGGTTGG TACA TCA-CCAGAGC TTTTCATTTATAAAG LSL_0843 860763 - 861389 + | hypothetical protein TERM 904 861393 - 861418 + F 100 -7.7 -5.68438 | opp_overlap 861393 AAGAATAGTTAATAA TCCTGTTAGTT AGAG AACTAAGAGGA TTTTTTATTTGGTCA TERM 905 861418 - 861393 - f 73 -7.7 -3.75144 | opp_overlap 861393 AAGAATAGTTAATAA TCCTGTTAGTT AGAG AACTAAGAGGA TTTTTTATTTGGTCA TERM 906 861964 - 861950 - g 80 -2.9 -5.63857 | overlap 861941 AAAAAGCTAAAAAAA TCTTA GATGA TAAGA AAAAAGACCTAGATA TERM 907 862187 - 862177 - g 71 -5.4 -4.47183 | TACCAGGTAAAGAAA GCTA TTC TAGC TAGCACTAAGGAAGA TERM 908 862274 - 862264 - g 73 -4 -5.03715 | opp_overlap 862264, overlap 862265 ACTAGTGCTAAAAAA GTTT TTA AAAC TTCTAAAAAGAAACT LSL_0844 861496 - 862785 + | hypothetical protein LSL_0845 863061 - 863291 + | hypothetical protein TERM 909 863581 - 863591 + F 70 -4 -5.02421 | TCGTTAGCACACCTA TTTG TAA CAAA TTTATTTTTAATTTT TERM 910 864652 - 864628 - f 71 -7.9 -3.52836 | opp_overlap 864628, overlap 864631 AGAATAAATTCAGAA GATTTGGCAAT TCA ACTGCCAAGTC TTTTTTTGTTGTAAA TERM 911 864628 - 864652 + F 100 -7.9 -5.88565 | opp_overlap 864628 864631 AGAATAAATTCAGAA GATTTGGCAAT TCA ACTGCCAAGTC TTTTTTTGTTGTAAA LSL_0846 864752 - 865450 + | hypothetical protein LSL_0847 865443 - 866255 + | NIF3-related protein pepD 866274 - 867515 + | peptidase T TERM 912 867527 - 867550 + F 93 -6.8 -5.40072 | opp_overlap 867527 ATAATTGAGTATGAA TCTATCAGAT TTCG GTCTGGTAGA TTTTTTTAAGGAGAA LSL_0849 867571 - 868227 + | hypothetical protein TERM 913 868490 - 868500 + G 76 -4 -5.23292 | TCAGGAACCATTCTT CTAA TAA TTAG TTTTATTTTATATGG LSL_0850 868328 - 869260 + | drug/metabolite exporter family protein TERM 914 869262 - 869280 + F 100 -7.5 -5.63504 | opp_overlap 869262 AAGATGAATTTTAAA GTGTAGA GTAAA TCTACAC TTTTTTTATAGGATT TERM 915 869280 - 869262 - f 73 -7.5 -3.69092 | opp_overlap 869262 AAGATGAATTTTAAA GTGTAGA GTAAA TCTACAC TTTTTTTATAGGATT LSL_0851 869342 - 870598 + | TPR repeat-containing protein TERM 916 870695 - 870721 + F 73 -7.5 -3.65112 | opp_overlap 870695 870697 AATTATGACTATAGA TATTGACAAAA TTAAT TTTTGTCAGTA TTCTCTAATTTAGAT TERM 917 870951 - 870910 - f 77 -10.2 -2.71731 | opp_overlap 870910 GGTACCGTGCAACTA GCACCCTTGTTGTCTATC AAACTA GGTAGATAACAGGGGTGC TTTTCGGTTTAATAA TERM 918 870910 - 870951 + F 100 -16.8 -4.37711 | opp_overlap 870910 GGTACCGTGCAACTA GCACCCTTGTTGTCTATC AAACTA GGTAGATAACAGGGGTGC TTTTCGGTTTAATAA TERM 919 871109 - 871125 + G 81 -5.9 -5.00884 | opp_overlap 871109, overlap 871110 AATGAGAACACCAAT TTTCGAA AGC TTCGAAG TTTTTTCACGCACAT hisS 870981 - 872276 + | histidyl-tRNA synthetase aspS 872279 - 874051 + | aspartyl-tRNA synthetase TERM 920 874093 - 874060 - f 80 -9.8 -3.50251 | opp_overlap 874060, overlap 874056 874052 TGAATAATTAATTAA GAGTATGAATTTGA CGATGT TCAGATTCATACTC TTTTTTCAATAATTA TERM 921 874060 - 874093 + F 100 -12 -5.12617 | opp_overlap 874060 874056 874052 TGAATAATTAATTAA GAGTATGAATTTGA CGATGT TCAGATTCATACTC TTTTTTCAATAATTA corA 874183 - 875100 + | magnesium/cobalt transporter CorA TERM 922 875320 - 875349 + F 100 -14.5 -5.60993 | CGGTTATTTAGATCG TCCCAGTTATACA TTAT TGTATGACTGGGA TTTTTTTATGGAAGG TERM 923 875985 - 875995 + G 71 -5.4 -4.52345 | TTAGCTTCAGCAATT TCTG GAA CAGA TTTATTTGCTCATAT nhaC 875460 - 876827 + | Na(+)/H(+) antiporter TERM 924 876847 - 876881 + F 100 -10.2 -5.27335 | ATATAATTCTGATAG CCGTCTATAGTTAGTT TCA AACTAATAATAGATGG TTTTTCTTTCGCAAA dapF 876954 - 877931 + | diaminopimelate epimerase nudF 877943 - 878479 + | ADP-ribose pyrophosphatase LSL_0858 878489 - 878710 + | hypothetical protein pfs 878731 - 879417 + | 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase nifS 879433 - 880575 + | cysteine desulfurase / selenocysteine lyase LSL_0861 880588 - 880929 + | hypothetical protein TERM 925 881332 - 881320 - g 71 -3.4 -5.1244 | TGATGAATATAAAAA TGGA CGTAC TCCA AATCCTGATATTATG trmU 881042 - 882169 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 926 882176 - 882207 + F 100 -11.8 -4.65895 | opp_overlap 882180, overlap 882180 TACGTATAATTTTGA TAAAGAGGATTGCT ATTA AGTGATCCTCTTTA TTTTTAAATAAAAGG TERM 927 882180 - 882203 + F 90 -8.2 -4.89063 | opp_overlap 882180, overlap 882176 TATAATTTTGATAAA GAGGATTGCT ATTA AGTGATCCTC TTTATTTTTAAATAA TERM 928 883611 - 883597 - g 72 -5 -4.67607 | overlap 883593 883599 CTTTGAAGAAAGAAA CAGATG CTG CATCTA AGAAACGCTTAGAGG clpB 882294 - 884885 + | chaperone TERM 929 884917 - 884893 - T 100 -8.7 -5.59534 | opp_overlap 884893 AAGCATAATAAAAAA GTGTGTGAA TTTTACG TTCACACAC TTTTTGTTTGATATA TERM 930 884893 - 884917 + T 100 -9.4 -5.35815 | opp_overlap 884893 AAGCATAATAAAAAA GTGTGTGAAT TTTAC GTTCACACAC TTTTTGTTTGATATA LSL_0864 885120 - 884935 - | hypothetical protein dnaE 885267 - 888560 + | DNA polymerase III alpha subunit pfkA 888727 - 889689 + | 6-phosphofructokinase TERM 931 890427 - 890411 - g 83 -7.3 -4.66318 | ATTACTTGAAGAAAA GCACATG GAA CATGTAC AAATCTTCCCTAAGA pykF 889779 - 891539 + | pyruvate kinase TERM 932 891633 - 891602 - f 77 -10.2 -2.72746 | opp_overlap 891599 891602, overlap 891599 891595 TAAAAATATAATTGA GTAGCTCATTTCGT TTTT ACGAAGTGGGCTAC TTTTTTATCAAAAAA TERM 933 891602 - 891633 + F 100 -14.6 -5.24129 | opp_overlap 891599 891602 891595, overlap 891599 TAAAAATATAATTGA GTAGCTCATTTCGT TTTT ACGAAGTGGGCTAC TTTTTTATCAAAAAA LSL_0868 891718 - 892002 + | hypothetical protein TERM 934 892039 - 892075 + T 100 -8.9 -5.45652 | opp_overlap 892039 892041, overlap 892041 TATTAAAATAAAAAA TGCTGTAGTTTACTATT TGA ATTAGTAAGCTGCAGTA TTTTTTGTTGAAAAT TERM 935 892075 - 892039 - T 78 -2.3 -5.83211 | opp_overlap 892039 892041, overlap 892041 TATTAAAATAAAAAA TGCTGTAGTTTACTATT TGA ATTAGTAAGCTGCAGTA TTTTTTGTTGAAAAT TERM 936 892041 - 892073 + T 89 -9.3 -4.36592 | opp_overlap 892039 892041, overlap 892039 TTAAAATAAAAAATG CTGTAGTTTACTATT TGA ATTAGTAAGCTGCAG TATTTTTTGTTGAAA LSL_0869 892465 - 892094 - | hypothetical protein TERM 937 892528 - 892581 + r 87 -5.5 -5.70829 | opp_overlap 892532 892539, overlap 892535 892539 AAAATGATATCATTG CAAATTAAAAACCTTTGGAAATAAA GATT TTTAATTCCAAAGGTTTATTTTGTG TTTTTTTGTCGTCTT TERM 938 892535 - 892574 + r 100 -11 -5.11475 | opp_overlap 892532 892539, overlap 892528 892539 TATCATTGCAAATTA AAAACCTTTGGAAATAAA GATT TTTAATTCCAAAGGTTTA TTTTGTGTTTTTTTG TERM 939 892539 - 892570 + r 100 -11.8 -4.93812 | opp_overlap 892532 892539, overlap 892535 892528 ATTGCAAATTAAAAA CCTTTGGAAATAAA GATT TTTAATTCCAAAGG TTTATTTTGTGTTTT TERM 940 892570 - 892539 - R 100 -11.8 -4.99134 | opp_overlap 892535 892528 892539, overlap 892532 ATTGCAAATTAAAAA CCTTTGGAAATAAA GATT TTTAATTCCAAAGG TTTATTTTGTGTTTT LSL_0870 893192 - 892572 - | hypothetical protein gyrB 893358 - 895379 + | DNA topoisomerase IV subunit B gyrA 895404 - 897830 + | DNA topoisomerase IV subunit A TERM 941 897836 - 897880 + T 100 -6.8 -5.58522 | gap 1, opp_overlap 897836 TGAAGATTAAAAAAA GTAGG-ATTATTATCCCAA TTAGAATT TTGGAATAATAATTCCTAC TTTTTATTTTGTCTA TERM 942 897880 - 897836 - T 100 -9 -5.63374 | gap 1, opp_overlap 897836 TGAAGATTAAAAAAA GTAGG-ATTATTATCCCAA TTAGAATT TTGGAATAATAATTCCTAC TTTTTATTTTGTCTA LSL_0873 899565 - 897877 - | fibronectin-binding protein / fibrinogen-binding protein TERM 943 899655 - 899693 + H 81 -9.2 -3.8381 | opp_overlap 899662 899664 CTTTGCATTTTATAT TTTCAAATATTTTTTGAT AGT ACCAAAAAACATTTGAAA TTTACTGATCTATGT LSL_0874 899752 - 900183 + | MarR family transcriptional regulator TERM 944 900548 - 900567 + G 75 -10 -2.71681 | AATTAGTATTCATTT GGCCGGAA CAAT TTCTGGCC TGGTTCAAACAATTG LSL_0875 900222 - 901154 + | DegV family protein TERM 945 901164 - 901183 + F 88 -6.4 -5.43414 | overlap 901178 TTTTAATATTCGAAA GCTAGGGC AGAT GCTTTAGC TTTTTTATATATCAT lepB 901296 - 901883 + | Signal peptidase I TERM 946 901893 - 901920 + T 100 -10.1 -5.36441 | opp_overlap 901896 GATTAATTTTATGGA TAACGATTTTC AAACTA GAAAATCGTTA TTTTTTATCTGGGGC TERM 947 902029 - 902010 - T 100 -7.2 -6.04953 | opp_overlap 902010 902013 AGACAAACAAAAAAA TAACAGGG AGCC CCCTATTA TTATGTAATTAGCTA LSL_0877 902558 - 902109 - | hypothetical protein TERM 948 902605 - 902581 - R 85 -8 -4.55295 | opp_overlap 902581 902579 CTCCTTATAAATAAA GATGTACATT GGGAT AACGTACATC TCTTTAATTAATTAT glyA 903870 - 902617 - | serine hydroxymethyltransferase TERM 949 902865 - 902880 + g 72 -4.8 -4.7153 | overlap 902858 TATTAACTGTAATAT TTACTT GATC AAGTAA TTTTTCAGCTTCTTT TERM 950 903887 - 903903 + H 71 -6.7 -4.13945 | overlap 903901 CGGCAATCCCCCTTC TTAACTT GAT AAGTTAA TTTTAGCATAAAAAT LSL_0879 903993 - 904832 + | phosphoesterase LSL_0880 904974 - 905873 + | drug/metabolite exporter family protein TERM 951 905878 - 905903 + T 90 -4.1 -5.9663 | opp_overlap 905880 AAATCCAGTAAAAAA GGCATTTTC TTTTTATC GAAAATGTC TTTTTTTTACTATTT LSL_0881 907121 - 905913 - | ABC transporter, permease protein LSL_0882 908001 - 907105 - | ABC transporter, ATP-binding protein TERM 952 908080 - 908061 - R 81 -2.9 -5.85425 | opp_overlap 908054, overlap 908054 TAAATAAATAAAAAA GCTTTCT AATAAA AGAAAAC TTTTTAAATATATTA LSL_0883 908698 - 908093 - | hypothetical protein LSL_0884 908870 - 909010 + | hypothetical protein TERM 953 909027 - 909054 + T 93 -10 -4.61162 | opp_overlap 909027 TATTATATAAAAAAA CAGGTAATGAGT TAAA AATCATTACCTG TTTCTTATTTAATCT TERM 954 909054 - 909027 - T 100 -10 -5.74122 | opp_overlap 909027 TATTATATAAAAAAA CAGGTAATGAGT TAAA AATCATTACCTG TTTCTTATTTAATCT LSL_0885 909344 - 909069 - | DNA-binding protein HU engA 910775 - 909465 - | GTP-binding protein EngA TERM 955 910832 - 910812 - R 91 -7.6 -5.22794 | opp_overlap 910810 910814 ATAATCATTAAAAAA GAGCGGAA AGTAA TTCCACTC TCTAAGTTAAAAGTT rpsA 912059 - 910860 - | 30S ribosomal protein S1 arsC 912725 - 912312 - | arsenate reductase TERM 956 912765 - 912800 + r 77 -4.2 -5.39905 | gap 1, opp_overlap 912766, overlap 912766 TTTTACAATAAAAAA ATAGAGAACTTGAAATA GTT TA-TTCAAGTCCTCTAA TTTTTATTATTTAAT TERM 957 912766 - 912799 + r 74 -7.7 -3.81503 | gap 1, opp_overlap 912766, overlap 912765 TTTACAATAAAAAAA TAGAGAACTTGAAATA GTT TA-TTCAAGTCCTCTA ATTTTTATTATTTAA TERM 958 912799 - 912766 - R 100 -9.9 -5.88565 | gap 1, opp_overlap 912766 912765 TTTACAATAAAAAAA TAGAGAACTTGAAATA GTT TA-TTCAAGTCCTCTA ATTTTTATTATTTAA dltD 914081 - 912807 - | protein dltD precursor LSL_0890 914311 - 914084 - | D-alanine--poly(phosphoribitol) ligase subunit 2 dltB 915534 - 914332 - | protein dltB TERM 959 914408 - 914394 - G 70 -3.6 -4.84353 | opp_overlap 914397, overlap 914397 914399 914404 AGAAACTAAAACAAA CAACAT TGA ATGTTA GGAACATTGCAAAGT TERM 960 915204 - 915224 + g 81 -7.6 -4.42748 | overlap 915206 CAATGATTGATTCCT TACCTGCA TCTAT TGCAGGTG TTATTTTTACAATAA TERM 961 915206 - 915222 + g 75 -8 -3.81349 | overlap 915204 ATGATTGATTCCTTA CCTGCA TCTAT TGCAGG TGTTATTTTTACAAT LSL_0892 917060 - 915534 - | D-alanine--D-alanyl carrier protein ligase LSL_0893 917234 - 917076 - | hypothetical protein recO 918177 - 917395 - | DNA repair protein TERM 962 917498 - 917509 + g 89 -3 -5.92337 | TAAATCTCATTTAAT GTTA ATTT TAAC TTTTTTTTAGTATCT TERM 963 918205 - 918227 + r 74 -6.2 -4.48583 | opp_overlap 918205 918210 CTACTTACAAAAAAA GCGAAGAAGA TTT TCTTCAACGC TTTATTATGTTAATT TERM 964 918227 - 918205 - R 93 -6.2 -5.64274 | opp_overlap 918205, overlap 918210 CTACTTACAAAAAAA GCGAAGAAGA TTT TCTTCAACGC TTTATTATGTTAATT era 919146 - 918244 - | GTP-binding protein Era TERM 965 918775 - 918798 + g 73 -4 -5.16472 | ATGAATTTGATCAAT CTTATTTATT ACTA AGTAAATAGG TTTTTTAACATTTTT TERM 966 919092 - 919081 - G 70 -4.4 -4.66609 | TACTCGATTTAAAAA GGTA GATT TACC AACATTAGGTCTACC dgkA 919578 - 919162 - | diacylglycerol kinase LSL_0897 920035 - 919556 - | hypothetical protein phoH 921016 - 920051 - | PhoH protein amiC 921213 - 922061 + | N-acetylmuramoyl-L-alanine amidase TERM 967 922060 - 922101 + T 100 -14.1 -4.8143 | opp_overlap 922046 922065, overlap 922065 ATTTTAATCAAAACT AAAAAGTCAAAGAATATCA AAAT TGGTATTCTTTGACTTTTA TTTTTACATTATTAA TERM 968 922065 - 922096 + T 100 -14 -5.29885 | opp_overlap 922065, overlap 922060 AATCAAAACTAAAAA GTCAAAGAATATCA AAAT TGGTATTCTTTGAC TTTTATTTTTACATT TERM 969 922096 - 922065 - T 100 -11.8 -5.13016 | opp_overlap 922065 922060 AATCAAAACTAAAAA GTCAAAGAATATCA AAAT TGGTATTCTTTGAC TTTTATTTTTACATT cmk 922787 - 922113 - | cytidylate kinase LSL_0901 923370 - 922819 - | hypothetical protein recQ 924877 - 923432 - | ATP-dependent DNA helicase TERM 970 923767 - 923779 + g 83 -7.7 -4.65458 | TTTCATTATCTGTTT CAGCA AAT TGCTG TTTATTATTTATGTA LSL_0903 925904 - 924864 - | hypothetical protein TERM 971 924937 - 924925 - G 75 -4.8 -4.94992 | CGAAATTTATAAAAA GGCA TTTGG TGCC CTGACAATTCTAAAT mntH 926084 - 927649 + | manganese transport protein TERM 972 927707 - 927661 - T 100 -19.8 -4.03137 | opp_overlap 927661 927667, overlap 927667 ATAGAATCAATTAAA TTAAAAGGAACCTCCAATCTCA ACT CGAAATTGGAGGTTCCTTTTTA CTATATTATTCATTA TERM 973 927661 - 927707 + T 100 -16.9 -2.58074 | opp_overlap 927661 927667, overlap 927667 ATAGAATCAATTAAA TTAAAAGGAACCTCCAATCTC AACTC GAAATTGGAGGTTCCTTTTTA CTATATTATTCATTA TERM 974 927667 - 927701 + T 100 -15.9 -4.88711 | opp_overlap 927667 927661, overlap 927661 TCAATTAAATTAAAA GGAACCTCCAATCTC AACTC GAAATTGGAGGTTCC TTTTTACTATATTAT TERM 975 927701 - 927667 - T 100 -18.8 -4.62054 | opp_overlap 927661 927667, overlap 927661 TCAATTAAATTAAAA GGAACCTCCAATCTCA ACT CGAAATTGGAGGTTCC TTTTTACTATATTAT LSL_0905 928081 - 927713 - | 6-pyruvoyl tetrahydropterin synthase TERM 976 929322 - 929312 - R 84 -5.4 -5.42259 | overlap 929313 TGATTTCTAAAAAAA GCAA CAA TTGC TGGTGATAATTCGAA LSL_0906 929996 - 929400 - | hypothetical protein LSL_0907 931533 - 929989 - | hypothetical protein TERM 977 930238 - 930225 - G 82 -5.3 -5.27023 | ATCCGAAAAATAAAA TTCCT ACCA AGGAA ATCCAGATTAATTGA TERM 978 931574 - 931553 - R 88 -6.7 -5.26918 | opp_overlap 931553, overlap 931541 ATATTGTATAAAAAA TAAGCCAAA CAAC TTTAGCTTA TTTTTATACGAACGT TERM 979 931553 - 931574 + r 70 -4.5 -4.83169 | opp_overlap 931541 931553 ATATTGTATAAAAAA TAAGCCAAA CAAC TTTAGCTTA TTTTTATACGAACGT LSL_0908 932397 - 931600 - | hypothetical protein TERM 980 931848 - 931833 - G 76 -7.6 -4.07562 | opp_overlap 931832 CAAATTCTAGATAAA CCTTAC CACT GTAAGG ACTCTTGTAAAGATA TERM 981 932722 - 932666 - R 77 -4.1 -5.47159 | gap 2 TTTAACAAACAAAAA CTCCCTTCAGAATAGAC-GACTAA-GT TTGTT ACATTAATGTGTCTATTCCAAAGAGAG TCTACAATTTATCTA rpoD 933873 - 932755 - | RNA polymerase sigma factor RpoD dnaG 935739 - 933886 - | DNA primase TERM 982 935883 - 935856 - R 76 -3.5 -5.5112 | TTCATTAATAAAAAA GTTGAAAGG CACATAAAAT CCTTCCAAC TCTTATATATCATAT glyS 938001 - 935920 - | glycyl-tRNA synthetase beta chain glyQ 938918 - 938001 - | glycyl-tRNA synthetase subunit alpha TERM 983 938978 - 939018 + r 81 -9.1 -3.78953 | opp_overlap 938961 938960 938978, overlap 938981 GTTGCATAAGAAAAA GACCGTTCCTATGCAAC GCCTCTG GTTACATAGGGACGATC TTTCATCATCGCGGT TERM 984 939018 - 938978 - R 100 -11.3 -5.18726 | opp_overlap 938978 938981, overlap 938961 938960 GTTGCATAAGAAAAA GACCGTTCCTATGCAAC GCCTCTG GTTACATAGGGACGATC TTTCATCATCGCGGT TERM 985 938981 - 939015 + r 74 -9.4 -2.68493 | opp_overlap 938961 938960 938978, overlap 938978 GCATAAGAAAAAGAC CGTTCCTATGCAAC GCCTCTG GTTACATAGGGACG ATCTTTCATCATCGC TERM 986 939316 - 939355 + r 79 -3.6 -5.57729 | opp_overlap 939318, overlap 939318 GTTATTATTTCTAAA AAGATAGTCATACCAGTT TTTT AACCGGCATAACTATCTA TTTTTTATCTTGTTT TERM 987 939318 - 939353 + r 74 -6.2 -4.38219 | opp_overlap 939318, overlap 939316 TATTATTTCTAAAAA GATAGTCATACCAGTT TTTT AACCGGCATAACTATC TATTTTTTATCTTGT TERM 988 939353 - 939318 - R 100 -12.8 -4.60487 | opp_overlap 939318 939316 TATTATTTCTAAAAA GATAGTCATACCAGTT TTTT AACCGGCATAACTATC TATTTTTTATCTTGT LSL_0913 940240 - 939353 - | putative acyltransferases and hydrolases with the alpha/beta hydrolase fold celB 941590 - 940241 - | cellobiose PTS, EIIC hsdS 941848 - 943053 + | Type I restriction-modification system specificity subunit TERM 989 943078 - 943108 + F 72 -7.2 -3.95231 | opp_overlap 943083, overlap 943083 TAATGTTATTATTAG TATAATTTTATATA TAA TATATAAAATTTTA TGTTATTTTTTAGTT TERM 990 943083 - 943103 + F 86 -7.1 -4.90321 | opp_overlap 943083, overlap 943078 TTATTATTAGTATAA TTTTATATA TAA TATATAAAA TTTTATGTTATTTTT TERM 991 943555 - 943540 - g 72 -6.2 -4.28067 | GGAACAATAGATAAA CCTTTA TACT TAAAGG CCCCCTTTTGGACAG TERM 992 944005 - 943991 - g 71 -8.6 -2.9838 | overlap 943984 943988 GTGAAAAAGGAATTA CTCCAT ATT ATGGAG CTAATGGAATACAGG hsdS 943300 - 944418 + | Type I restriction-modification system specificity subunit TERM 993 944421 - 944457 + T 77 -8.9 -3.25191 | opp_overlap 944420 944426, overlap 944426 TATGTTTATATAAGC AAAAACGACAAGATC TATAAGT GGTCTTGTCGTTTTC ATTTTATAACGTTGC TERM 994 944452 - 944426 - T 85 -6.6 -4.96646 | opp_overlap 944426 944421, overlap 944420 TTATATAAGCAAAAA CGACAAGATC TATAAGT GGTCTTGTCG TTTTCATTTTATAAC TERM 995 944426 - 944452 + T 89 -8.8 -4.73108 | opp_overlap 944420 944426, overlap 944421 TTATATAAGCAAAAA CGACAAGATC TATAAGT GGTCTTGTCG TTTTCATTTTATAAC xerC 945378 - 944461 - | DNA integration/recombination/inversion protein TERM 996 945425 - 945388 - R 79 -7.3 -4.50976 | gap 1, opp_overlap 945402 TCTCATATGAGAAAA CCTCCTTAATTAAACTAA TAA TTAGCTTA-TCAAAGAGG CCAGTATTAAATGAA hsdS 946586 - 945432 - | Type I restriction-modification system specificity subunit hsdM 948175 - 946586 - | Type I restriction-modification system methylation subunit hsdR 951207 - 948193 - | Type I restriction-modification system restriction subunit TERM 997 950078 - 950088 + g 73 -4 -5.14163 | TTTAAATATTTCTTT GATA AGT TATC TTTTTGTTCATCAAT TERM 998 951367 - 951344 - R 74 -5.2 -4.85195 | opp_overlap 951344 AAAAGAATTTAAAAA GCCAACAGGG AAAT CTCTGCTGAC TTATAAATAATCACC LSL_0921 951577 - 951368 - | hypothetical protein LSL_0922 952237 - 951623 - | phosphohydrolase, MutT/nudix family protein TERM 999 952387 - 952357 - R 100 -10.6 -5.46706 | opp_overlap 952372 AGGCCAAAATAAAAA GGATCCCAAGAAAA ATT CTTTCTTAGAATCC TTAAAAATATACCCT pgpB 953091 - 952414 - | phosphatidylglycerophosphatase B LSL_0924 953726 - 953094 - | maltose O-acetyltransferase LSL_0925 954160 - 953933 - | hypothetical protein LSL_0926 954140 - 954898 + | zwittermicin A resistance protein zmaR TERM 1000 955019 - 954993 - fH 100 -10.3 -5.88565 | opp_overlap 954995 CCGATAATAAAAAAA TAGCCAGTAAG AAAAA CTTACTGACTA TACTCACATATATAA TERM 1001 955087 - 955108 + G 95 -6.7 -5.80951 | opp_overlap 955087 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTGTTTTAAGT LSL_0927 955042 - 955167 + | hypothetical protein LSL_0928 956407 - 955313 - | ISL3 family transposase TERM 1002 955794 - 955804 + g 74 -5.4 -4.71584 | opp_overlap 955794 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 1003 956322 - 956342 + g 81 -9.9 -3.38522 | overlap 956321 956326 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA TERM 1004 956529 - 956488 - R 84 -6.1 -5.19275 | gap 1, opp_overlap 956500, overlap 956491 ATGGAGAAAATAAAA GAAGGACCG-TAATGTAAAA AAA TTTTACATTATCAGTCCTAA ATATTATACAACCTA TERM 1005 956526 - 956491 - R 100 -12.2 -4.66746 | gap 1, opp_overlap 956500, overlap 956488 GAGAAAATAAAAGAA GGACCG-TAATGTAAAA AAA TTTTACATTATCAGTCC TAAATATTATACAAC adeC 958422 - 956686 - | adenine deaminase LSL_0930 959086 - 958535 - | hypothetical protein TERM 1006 959437 - 959466 + H 100 -16.5 -5.27335 | TACCACGAGAATTTC GTCCCACGGCTGA TTAG TCAGTCGTGGGGC TTTTTGTTTAAAAGG nhaC 959562 - 960947 + | Na(+)/H(+) antiporter TERM 1007 960964 - 960987 + F 80 -5.3 -5.24449 | AAATATTATTCATGA GATAGGTCT TATAAT GGGCCTATC TTTTTTACATTTATA TERM 1008 961404 - 961382 - g 81 -9.2 -3.72576 | overlap 961385 GCCGCTGTTATTAAA GAAGCCTACT TTA AGCAAGCTTC GACAACAGACTACAA recU 961115 - 961756 + | Holliday junction-specific endonuclease TERM 1009 962485 - 962471 - g 82 -8.6 -3.97947 | opp_overlap 962470 962468 TTGATTTAGCACAAA CTGCAA TGA TTGCAG GTATTCCTAACGCTC mrcA 961786 - 964104 + | multimodular transpeptidase-transglycosylase PBP 1A TERM 1010 964154 - 964118 - T 100 -12.6 -5.30348 | gap 1, opp_overlap 964118 AGTTAATAATAAAAA CAGGATTTGAAATCTGA TTTT CCAG-TTTCAAATCCTG TTTTTTTATGCTCTA TERM 1011 964118 - 964154 + T 100 -11.9 -5.69473 | gap 1, opp_overlap 964118 AGTTAATAATAAAAA CAGGATTTGAAATCTG ATTTTC CAG-TTTCAAATCCTG TTTTTTTATGCTCTA LSL_0934 965053 - 964160 - | integrase/recombinase XerD/RipX family LSL_0935 965926 - 965060 - | hypothetical protein LSL_0936 966402 - 965941 - | hypothetical protein TERM 1012 966514 - 966491 - R 100 -9.6 -5.26875 | opp_overlap 966489 TTTCCAAGTAAAAAA GTCGCTAGAC AAAT GCCTAACGAC TCTACATTCATTTTC LSL_0937 967125 - 966529 - | hypothetical protein TERM 1013 967083 - 967103 + g 78 -6.9 -4.41047 | opp_overlap 967087 ATGAAATAGCGGCAA GACATGCAA TTA TTGCATATC TTTTAATTGAAACAT TERM 1014 967177 - 967213 + r 83 -8.1 -4.17906 | opp_overlap 967182, overlap 967182 AGAGTAATTATAAGT AAAAAGCCCTGCTGATT AGG AATCAACAGAGCTTTTG TTATTTCATTTACTT TERM 1015 967208 - 967182 - R 100 -12.4 -4.95876 | opp_overlap 967177 967182 AATTATAAGTAAAAA GCCCTGCTGATT AGG AATCAACAGAGC TTTTGTTATTTCATT TERM 1016 967182 - 967208 + r 91 -8 -5.03961 | opp_overlap 967182, overlap 967177 AATTATAAGTAAAAA GCCCTGCTGATT AGG AATCAACAGAGC TTTTGTTATTTCATT rluB 968156 - 967428 - | ribosomal large subunit pseudouridine synthase B LSL_0939 968746 - 968156 - | segregation and condensation protein ScpB LSL_0940 969521 - 968736 - | segregation and condensation protein ScpA LSL_0941 969870 - 969505 - | RibT protein LSL_0942 970683 - 970039 - | hypothetical protein TERM 1017 970098 - 970085 - G 79 -5.3 -5.1471 | ATGATAAAAAATAAA CCTAT AATC ATAGG GCCATAATAACAACC LSL_0943 971715 - 970720 - | hypothetical protein TERM 1018 971808 - 971821 + r 72 -2.5 -5.4505 | overlap 971788 AAAATAATGATATTT TTAAT GTTT ATTAA TTTTTTCTTAAACAA LSL_0944 972011 - 971877 - | hypothetical protein LSL_0945 972352 - 972086 - | hypothetical protein TERM 1019 972433 - 972414 - R 100 -8.6 -5.79595 | opp_overlap 972414 972417 CTTCAAAATAAAAAA GCATGCAC ATCA GTGCATAC TTTTCGAGATATTCA hslU 973862 - 972459 - | ATP-dependent protease ATP-binding subunit LSL_0947 974408 - 973881 - | ATP-dependent protease peptidase subunit LSL_0948 975331 - 974435 - | XerC/CodV family integrase/recombinase TERM 1020 975515 - 975476 - R 86 -7.4 -4.82154 | gap 1 AATTCATACTAAAAA GCACTTTGAAAC-CTGCCT AAT AGACAATATTTCAAAGTAC TTCATGATTAATCTT cfa 976698 - 975523 - | cyclopropane-fatty-acyl-phospholipid synthase LSL_0950 976972 - 977934 + | transcription regulator TERM 1021 977973 - 977932 - T 100 -10.4 -5.18561 | opp_overlap 977935, overlap 977935 GAAAGACGCAAAAAA TAATCCCGCTTTTTGAAA GAATTG TTTCAAAAAGTGGGATTT TTAGTTATTAGTTGT TERM 1022 977935 - 977970 + T 100 -14.3 -5.00339 | opp_overlap 977935 977932 AGACGCAAAAAATAA TCCCGCTTTTTGAAA GAATTG TTTCAAAAAGTGGGA TTTTTAGTTATTAGT TERM 1023 977970 - 977935 - T 100 -12.1 -4.65666 | opp_overlap 977935, overlap 977932 AGACGCAAAAAATAA TCCCGCTTTTTGAAA GAATTG TTTCAAAAAGTGGGA TTTTTAGTTATTAGT LSL_0951 978951 - 978049 - | hypothetical protein LSL_0952 979209 - 978976 - | hypothetical protein TERM 1024 979458 - 979470 + H 79 -4.9 -5.1861 | opp_overlap 979468 AGCGTTCCCATATAT CTATA TTA TATAG TTTTTTACTAATAAG LSL_0953 979569 - 980153 + | hypothetical protein TERM 1025 980206 - 980240 + T 100 -14.6 -4.65838 | opp_overlap 980206 AGCACAACAAAAAAA CGTCTTAAATCCTT ACCTATC AAGGATTTAAGACG TTTTTAAACTATATA TERM 1026 980240 - 980206 - T 100 -15.3 -5.89921 | opp_overlap 980206 AGCACAACAAAAAAA CGTCTTAAATCCTTA CCTAT CAAGGATTTAAGACG TTTTTAAACTATATA rpmA 980537 - 980256 - | 50S ribosomal protein L27 LSL_0955 980885 - 980559 - | ribosomal protein rplU 981218 - 980910 - | 50S ribosomal protein L21P TERM 1027 981121 - 981104 - G 71 -3.5 -5.1356 | opp_overlap 981107 CGCCACCAACAAAAA CAACTTT GTCA AAAGTTA CCTTGTCGCCTTCTT LSL_0957 981631 - 981374 - | hypothetical protein LSL_0958 981780 - 981628 - | hypothetical protein LSL_0959 982169 - 981762 - | hypothetical protein TERM 1028 982041 - 982051 + g 82 -3.2 -5.63374 | TAATTTATCATAAGC TGGT TGT GCCA TTTTTTTACTGTTCC TERM 1029 982266 - 982245 - R 74 -5.9 -4.66833 | TTTCAACGTTAAAAA GACATATCA TTTC TGACATGCC TTATTGCTTATTTAA LSL_0960 982522 - 982289 - | hypothetical protein LSL_0961 982739 - 982539 - | hypothetical protein LSL_0962 983351 - 982830 - | hypothetical protein LSL_0963 983671 - 984408 + | hypothetical protein TERM 1030 984433 - 984414 - f 95 -8.6 -5.12474 | opp_overlap 984409 984414 TAGAACATAGAAAAA GACAGTCA TTCT CGACTGTC TTTTCATTCTCTTTA TERM 1031 984414 - 984433 + F 82 -7.9 -4.58724 | opp_overlap 984414, overlap 984409 TAGAACATAGAAAAA GACAGTC ATTCTC GACTGTC TTTTCATTCTCTTTA LSL_0964 984492 - 985058 + | phosphohydrolase, MutT/nudix family protein gAlE 986014 - 985055 - | UDP-glucose 4-epimerase wecD 986570 - 986058 - | acetyltransferase TERM 1032 986664 - 986633 - R 88 -8.9 -4.31166 | opp_overlap 986629 TTATAAATATATAAA GAGTAAGTATGAA AGCGAA TTCCTACTTACTC TAAATCCTGTTTATA LSL_0967 987704 - 986895 - | hypothetical protein TERM 1033 987816 - 987780 - R 100 -19.1 -3.39923 | opp_overlap 987785 987788, overlap 987785 AGGACTAAAATGTAA CAAAAGAAGTTCTAACA AAA TGCTAGAACTTCTTTTG AGGGGCTTTATCTTC TERM 1034 987785 - 987811 + r 93 -11 -4.10453 | opp_overlap 987780 987785, overlap 987788 TAAAATGTAACAAAA GAAGTTCTAACA AAA TGCTAGAACTTC TTTTGAGGGGCTTTA TERM 1035 987811 - 987785 - R 100 -13.2 -4.77719 | opp_overlap 987785 987788, overlap 987780 TAAAATGTAACAAAA GAAGTTCTAACA AAA TGCTAGAACTTC TTTTGAGGGGCTTTA TERM 1036 987788 - 987808 + r 74 -6.9 -4.17316 | opp_overlap 987785 987780, overlap 987785 AATGTAACAAAAGAA GTTCTAACA AAA TGCTAGAAC TTCTTTTGAGGGGCT LSL_0968 988485 - 987802 - | hypothetical protein TERM 1037 987864 - 987852 - G 76 -7.7 -4.00447 | AAAAGAAATCAATAA TTGGC AAA GCCAA GTATGCATATAAAGT LSL_0969 988702 - 989271 + | hypothetical protein TERM 1038 989320 - 989275 - T 100 -8.6 -5.34365 | opp_overlap 989278, overlap 989278 GCAGAAGAATAAAAA TAAGCAAGTAATTAATTTGT TTAAAT ACAAATCGATTACTTGCTTT TTATTGTGCGAATTT TERM 1039 989317 - 989278 - T 95 -10.3 -4.72127 | opp_overlap 989278, overlap 989275 GAAGAATAAAAATAA GCAAGTAATTAATTTGT TTAAAT ACAAATCGATTACTTGC TTTTTATTGTGCGAA TERM 1040 989278 - 989317 + T 100 -10.3 -5.18726 | opp_overlap 989275 989278 GAAGAATAAAAATAA GCAAGTAATTAATTTGT TTAAAT ACAAATCGATTACTTGC TTTTTATTGTGCGAA qor 990345 - 989341 - | quinone oxidoreductase TERM 1041 990494 - 990454 - R 100 -6.5 -5.75599 | gap 1, opp_overlap 990454 990487 GAAAGCACAAAAAAA TAGCCTAAAACTCATGCT TCTCAC AACATGA-TTTTAAGCTA TCTTAATAATTATTG LSL_0971 990878 - 990570 - | Zinc finger protein LSL_0972 991320 - 990859 - | transcription regulator LSL_0973 992228 - 991383 - | hypothetical protein TERM 1042 992356 - 992318 - R 84 -3.5 -5.88197 | gap 1 CTAAATACAAAAAAA TAAGAAGTAAATTACAAT AACT ATCATAATC-ACTTCTTA ATAAAGCTTTTTTAA LSL_0975 992700 - 992368 - | hypothetical protein rfaG 994015 - 992876 - | glycosyltransferase rfaG 995265 - 994108 - | glycosyltransferase ugd 996527 - 995277 - | UDP-glucose 6-dehydrogenase LSL_0980 997612 - 996533 - | UDP-glucuronate 4-epimerase LSL_0981 999150 - 997618 - | oligosaccharide translocase rfaG 1000232 - 999171 - | glycosyltransferase rfaG 1001372 - 1000257 - | glycosyltransferase rfaG 1002584 - 1001469 - | glycosyltransferase LSL_0985 1003705 - 1002614 - | hypothetical protein rfaG 1004604 - 1003717 - | glycosyltransferase rfaG 1005483 - 1004617 - | glycosyltransferase rfaG 1006603 - 1005497 - | glycosyltransferase rfaG 1007782 - 1006634 - | glycosyltransferase TERM 1043 1007059 - 1007069 + g 84 -5.4 -5.40072 | overlap 1007068 CAACCAATAATAATT TCCA GTC TGGA TTTTTTTGAGCAAAA rfaG 1008968 - 1007820 - | glycosyltransferase TERM 1044 1008812 - 1008838 + g 73 -3.9 -5.02476 | CAAAATTTATATTTT TATCTAATTTG TAACT TGAATTAGATA TTTTTTCAGGCGTAT rfaG 1010078 - 1008981 - | glycosyltransferase TERM 1045 1009059 - 1009072 + g 74 -2.3 -5.5762 | overlap 1009060 CTCTACTTTTTTTCG TGCGG CAAC CCCCA TTTTTTCTCTTTGAT wecD 1010682 - 1010092 - | acetyltransferase LSL_0993 1011326 - 1010679 - | UDP-galactose phosphate transferase TERM 1046 1010966 - 1010956 - G 71 -6.8 -4.25056 | TACTTCACTAATAAA GGAC GTG GTCC AATCAATGCCATATC LSL_0994 1012572 - 1011376 - | aminotransferase LSL_0995 1014458 - 1012569 - | UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase TERM 1047 1014147 - 1014137 - G 74 -6.8 -4.36914 | opp_overlap 1014136 TTCTTGTGCATAAAA CGGT AAT ACCG ATTCCATGAAAAATC LSL_0996 1015140 - 1014478 - | tyrosine-protein kinase LSL_0997 1015888 - 1015145 - | chain length regulator TERM 1048 1016181 - 1016158 - R 88 -6.8 -5.20154 | opp_overlap 1016158 ATACAACTTAAAAAA GACTATACCA ATCC TGATATAGCC TTCATTCCTTTATAA wecD 1016706 - 1016191 - | acetyltransferase LSL_0999 1018096 - 1016726 - | putative 23S rRNA m(5)C methyltransferase LSL_1000 1019083 - 1018106 - | hypothetical protein LSL_1001 1019865 - 1019092 - | hypothetical protein TERM 1049 1020324 - 1020313 - g 85 -4.4 -5.61881 | opp_overlap 1020313 GCTGAAAAAGAAAAA CTTG GAAT CAAG ATTGTCGCTGCTGAA LSL_1002 1020013 - 1020822 + | HAD superfamily hydrolase TERM 1050 1020855 - 1020832 - T 93 -8.3 -5.1925 | opp_overlap 1020832 GCATAATGCAAAAAA CGATTTCTA TATTAC TAGAAATCG TTTTTTCTTATCTAT TERM 1051 1020832 - 1020855 + T 100 -8.3 -5.62045 | opp_overlap 1020832 GCATAATGCAAAAAA CGATTTCTA TATTAC TAGAAATCG TTTTTTCTTATCTAT wecD 1021390 - 1020863 - | acetyltransferase lysA 1022702 - 1021410 - | diaminopimelate decarboxylase TERM 1052 1022829 - 1022808 - R 86 -3.8 -5.89921 | ATGACAATAAAAAAA GACTAACT TTCAAT AGTTAATC TCTTTTATAATTATT TERM 1053 1022837 - 1022849 + r 72 -3.5 -5.12971 | AGTTAATCTCTTTTA TAATT ATT AATTA TTTTTCTTCACTCTT LSL_1005 1023035 - 1022847 - | 4-oxalocrotonate tautomerase LSL_1006 1023167 - 1024591 + | dipeptidase A LSL_1007 1024604 - 1025500 + | hypothetical protein TERM 1054 1025513 - 1025532 + F 79 -2.8 -5.77677 | opp_overlap 1025513 TAATGCTTTAAACTA GACTAAGA ATTT TCTCGGTC TTTTTTATTATTTTA LSL_1008 1025573 - 1026409 + | AraC family transcriptional regulator TERM 1055 1026431 - 1026392 - T 100 -11.8 -5.2291 | gap 1, opp_overlap 1026392 AGACTACAACAAAAA GAGCTTCTAACATTA-TGA TTT TCATTAATGCTAGAAACTC TTTTTTACTATCTTA TERM 1056 1026392 - 1026431 + T 91 -7.4 -5.27399 | gap 1, opp_overlap 1026392 AGACTACAACAAAAA GAGCTTCTAACATTA-TGA TTT TCATTAATGCTAGAAACTC TTTTTTACTATCTTA LSL_1009 1027044 - 1026439 - | hypothetical protein TERM 1057 1026783 - 1026767 - G 71 -3 -5.13521 | overlap 1026776 AAACCATTCAAAAAA GCTAAT GTATA ATCAGC TATTATTCCTGTTAA galA 1029274 - 1027037 - | Alpha-galactosidase LSL_1011 1029392 - 1029276 - | hypothetical protein TERM 1058 1029453 - 1029414 - R 100 -9.5 -5.18726 | overlap 1029416 TTTTTATAATAAAAA CACCTCATAACCGTCAG TTTTAC CTAACAATTATGAGGTA CTAAATTATAATTTC TERM 1059 1029451 - 1029416 - R 93 -9.9 -4.22377 | overlap 1029414 TTTATAATAAAAACA CCTCATAACCGTCAG TTTTAC CTAACAATTATGAGG TACTAAATTATAATT wecD 1029899 - 1029459 - | acetyltransferase ssl 1032880 - 1029920 - | DNA/RNA helicase TERM 1060 1030002 - 1030021 + g 76 -2.8 -5.51046 | TCATACGAAACAATT GGTGTGTT TACT AACTTACC TTTTTTATCTATTTC TERM 1061 1031018 - 1031042 + g 70 -2.3 -5.35815 | overlap 1031020 TAATTCTTGATAATC TTTTTTTATTT CTA AAGTAAAGAGA TTTTTCTTTCCTCTC mutT 1033289 - 1032867 - | 7,8-dihydro-8-oxoguanine-triphosphatase TERM 1062 1033666 - 1033646 - g 81 -9.9 -3.38522 | overlap 1033644 1033650 TATTGACCCTAAATA TCAATATAC TTC GTATATTGA AGAAAAAATTATTAA TERM 1063 1033844 - 1033833 - g 70 -4.4 -4.77165 | opp_overlap 1033812 1033833, overlap 1033812 1033811 CTTTCTATAAGAAAA CAGA AGTA TCTG TGTCCTGAATGCAAG TERM 1064 1034194 - 1034184 - g 74 -5.4 -4.71584 | opp_overlap 1034184 GAAAGAAATAATAAA TTCC TTA GGAA TTATTTCATTCAATA LSL_1015 1033581 - 1034870 + | ISL3 family transposase TERM 1065 1034903 - 1034882 - T 100 -6.7 -6.34616 | opp_overlap 1034882 TTAAAACAAAAAAAA CTATTAGAC TTTC ATCTAATAG TTTGAAAATAATAAT LSL_1016 1035763 - 1035017 - | hypothetical protein TERM 1066 1035441 - 1035456 + g 81 -7.6 -4.37092 | TCAATTGTAATTTGC TGGTTG TACT CAACCA TTTTATCCAAAAAAT TERM 1067 1035507 - 1035494 - G 70 -3.9 -4.99035 | opp_overlap 1035494 1035484 TGATTGATACAAAAA TTGAT GTGG ATCAA TATTTATATCTACTC LSL_1017 1036722 - 1035862 - | hypothetical protein TERM 1068 1036354 - 1036366 + g 75 -4.9 -4.9645 | ACGTGCATTACTTTC TCTAA GAC TTAGA TTTTCTTCTTGTAGT LSL_1018 1038781 - 1036709 - | cellulose synthase catalytic subunit LSL_1019 1040030 - 1038783 - | N-acetylglucosaminyltransferase TERM 1069 1039244 - 1039229 - G 76 -7.6 -4.05788 | opp_overlap 1039229 1039228, overlap 1039225 TTTGTCTAAACCAAA CCACAA AAGT TTGTGG CTCTTGTTCCCAGGT LSL_1020 1041223 - 1040039 - | hypothetical protein LSL_1021 1041609 - 1041220 - | hypothetical protein LSL_1022 1043066 - 1041606 - | hypothetical protein TERM 1070 1042491 - 1042477 - G 76 -3.6 -5.33785 | AATGATGACAAAAAA TACACT GCT AGTATA TACCAACTACGAGCA LSL_1023 1044133 - 1043078 - | hypothetical protein LSL_1024 1045253 - 1044078 - | response regulator TERM 1071 1045362 - 1045378 + r 74 -5.9 -4.73388 | TCAATCATCATTTTT TAGTGAT ATA ATCGCTA TTTTTAATAAGGATT TERM 1072 1045630 - 1045609 - R 100 -7.3 -6.02546 | opp_overlap 1045609 GCAAATCAAAAAAAA CGTCTACGT ATTC ACGCAAACG TTTTGATACTATCCT LSL_1025 1046928 - 1045639 - | guanine-hypoxanthine permease TERM 1073 1046892 - 1046907 + g 81 -7.6 -4.41779 | TTTGAATTGGTGTTT TCTTGG GTTG CCAAGA TCTTTTTATTTTATT TERM 1074 1047010 - 1047037 + r 71 -8.4 -3.35476 | opp_overlap 1047010 1047026, overlap 1047008 ATAGCCCATAAAAAA GAGCCACCTCAC CTAA GTGAGATAGCTC TCTTGTCATTAATTC TERM 1075 1047037 - 1047010 - R 100 -12.8 -5.26918 | opp_overlap 1047010 1047008, overlap 1047026 ATAGCCCATAAAAAA GAGCCACCTCAC CTAA GTGAGATAGCTC TCTTGTCATTAATTC ndh 1048257 - 1047052 - | NADH dehydrogenase menA 1049176 - 1048271 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 1076 1049279 - 1049293 + H 76 -7.2 -4.16301 | opp_overlap 1049273, overlap 1049273 AAAAATTCATATTTA GCAAAA TAA TTTTGC TTATTTGTCTCAATT TERM 1077 1050301 - 1050288 - g 74 -5.3 -4.82901 | opp_overlap 1050296, overlap 1050294 1050296 GGTGGTGTAGAAAAA GCTAA AGAT TTAGC TGCTAAATTTACTAA LSL_1028 1049424 - 1050410 + | farnesyl pyrophosphate synthetase / geranyltranstransferase / farnesyltransferase / heptaprenyl diphosphate synthase component II TERM 1078 1050409 - 1050448 + T 100 -11 -4.51097 | opp_overlap 1050414, overlap 1050414 TAAAACGTACAAATT AAAAAGTCATCACTCTAA TTTT TTAGAATGATGACTTTTA TTTTATCGTCCTTCA TERM 1079 1050414 - 1050443 + T 100 -10.9 -5.20781 | opp_overlap 1050414, overlap 1050409 CGTACAAATTAAAAA GTCATCACTCTAA TTTT TTAGAATGATGAC TTTTATTTTATCGTC TERM 1080 1050443 - 1050414 - T 100 -13.1 -5.04601 | opp_overlap 1050414 1050409 CGTACAAATTAAAAA GTCATCACTCTAA TTTT TTAGAATGATGAC TTTTATTTTATCGTC cydC 1052211 - 1050451 - | transport ATP-binding protein cydD 1053928 - 1052204 - | transport ATP-binding protein TERM 1081 1053838 - 1053885 + g 85 -4.3 -5.60864 | gap 1, opp_overlap 1053849, overlap 1053847 TGACAGCTTGACCAA CTATAAGAAAAGCTTGTAGGAT ATAAA GTCCTACAAGCCCT-CTCATAG TTTTTTTAATGTCTG TERM 1082 1053875 - 1053849 - G 100 -11 -4.84492 | opp_overlap 1053847 1053838 CCAACTATAAGAAAA GCTTGTAGGA TATAAAG TCCTACAAGC CCTCTCATAGTTTTT cydB 1054944 - 1053928 - | cytochrome d ubiquinol oxidase subunit II cydA 1056363 - 1054945 - | cytochrome d ubiquinol oxidase subunit I TERM 1083 1056570 - 1056545 - R 100 -8.5 -5.82281 | opp_overlap 1056545 1056544 AAATACACAAAAAAA TACTAGTAATC ATTT AATTACTAGTA CTTTTAATAAAATAT asnA 1057656 - 1056646 - | asparagine synthetase AsnA TERM 1084 1058053 - 1058035 - g 72 -6 -4.44974 | opp_overlap 1058035 1058048 CTAAAGCTGACAAAA TCACTGTA AAA TCCAGTGA TACTGTTTCTCAACT LSL_1034 1057944 - 1058915 + | peptidoglycan binding protein TERM 1085 1058931 - 1058951 + F 100 -6.9 -5.94214 | opp_overlap 1058931 1058933 TATAATTACTATATA TAGGAAGTT TTT ATCTTCCTA TTTTTTTATTGTATT LSL_1035 1059026 - 1059352 + | rhodanese-related sulfurtransferases TERM 1086 1059358 - 1059375 + F 100 -9.9 -5.88565 | TGATAAGTAACTTTA GCAAGGA TTCG TCCTTGC TTTTTTTATTATAAA LSL_1036 1059960 - 1060613 + | peptidoglycan binding protein TERM 1087 1060637 - 1060671 + T 100 -11.7 -5.82036 | gap 1, opp_overlap 1060637 CATAATATAACGAAA GCAAGTAAATTCTGGC TCTA GTCAGA-TTTACTTGC TTTTTTCTTTATTCT TERM 1088 1060671 - 1060637 - T 86 -9.5 -4.09827 | gap 1, opp_overlap 1060637 CATAATATAACGAAA GCAAGTAAATTCTGGC TCTA GTCAGA-TTTACTTGC TTTTTTCTTTATTCT LSL_1037 1061544 - 1060687 - | hypothetical protein LSL_1038 1062332 - 1061553 - | hypothetical protein LSL_1039 1062956 - 1062483 - | hypothetical protein TERM 1089 1063153 - 1063173 + G 70 -8.3 -3.26568 | opp_overlap 1063153, overlap 1063152 TGGTGCTTTAGGAGA TTCATTGGG TTA CCCAGTGGA ATTTTCTAGCTATCG TERM 1090 1063968 - 1063953 - g 71 -9 -3.06501 | GAGATTCTGATTCAA CCGGTT CAAT AACCGG ACAAATTGTGGGTGT draG 1063106 - 1064092 + | ADP-ribosylglycohydrolase TERM 1091 1064098 - 1064108 + F 72 -2.6 -5.36965 | opp_overlap 1064098 CAATACATAATAACA TATA AAA TATA TTTTTTATCCTATTA LSL_1041 1064286 - 1065125 + | hypothetical protein TERM 1092 1065183 - 1065153 - T 100 -12.8 -5.08824 | opp_overlap 1065153 TTTGTATGTAAAAAA GAGATTCAAAGATA AAC TTTCTTTGAATCTC TTTTAAATTATTAAT TERM 1093 1065153 - 1065183 + T 100 -12.8 -4.36729 | opp_overlap 1065153 TTTGTATGTAAAAAA GAGATTCAAAGATA AAC TTTCTTTGAATCTC TTTTAAATTATTAAT ileS 1067998 - 1065203 - | isoleucyl-tRNA synthetase TERM 1094 1068065 - 1068044 - R 91 -4.4 -5.95539 | TTGGAAACAAAAAAA TCCCATCC AGCAAG GGACGAGA TTTCCGTGGTACCAC divIVA 1069037 - 1068270 - | cell division initiation protein TERM 1095 1068579 - 1068613 + g 73 -8 -3.53444 | opp_overlap 1068581, overlap 1068581 GTCACTACCCTTAAT TACTTCAAGTTGTGAT TCC ATCATTACTTGAAGTC TTTGACGGAAGATAC TERM 1096 1068581 - 1068611 + g 85 -10.6 -3.34517 | opp_overlap 1068581, overlap 1068579 CACTACCCTTAATTA CTTCAAGTTGTGAT TCC ATCATTACTTGAAG TCTTTGACGGAAGAT TERM 1097 1068833 - 1068845 + g 71 -6.3 -4.23892 | opp_overlap 1068827, overlap 1068827 CCACAATAATTGATT GATTC AAT GAATC TTTTAAATCATTGAA TERM 1098 1068856 - 1068869 + g 84 -3.9 -5.59962 | opp_overlap 1068856 GAATCTTTTAAATCA TTGAA ATAC TTCAA TTTTTCTTTGTTTTG LSL_1044 1069848 - 1069060 - | RNA binding protein LSL_1045 1070108 - 1069851 - | integral membrane protein LSL_1046 1070588 - 1070136 - | hypothetical protein ftsZ 1071866 - 1070613 - | cell division protein FtsZ TERM 1099 1071049 - 1071023 - G 75 -8.9 -3.35996 | CAGCTTGAGCCACAA TATCTGAAGCA TCTTG TGCTTCAAATA AACTTAGGTCTGGGC ftsA 1073289 - 1071892 - | cell division protein ftsQ 1074279 - 1073425 - | cell division protein TERM 1100 1073928 - 1073941 + g 71 -5.3 -4.47888 | TAGTAGGCACAACCG CGAAT AAAG ATTCG TTCTTTTTCACTTGA murG 1075411 - 1074314 - | N-acetylglucosaminyl transferase murD 1076788 - 1075412 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 1101 1075565 - 1075577 + g 71 -7.7 -3.71107 | opp_overlap 1075555, overlap 1075562 ATAAGCTTCAGGGAC TGCAG AAA CTGCA TCTTTAGTTTTAATA mraY 1077785 - 1076817 - | phospho-N-acetylmuramoyl-pentapeptide-transferase LSL_1053 1079952 - 1077796 - | penicillin binding protein 2B LSL_1054 1080305 - 1079949 - | cell division protein ftsL mraW 1081270 - 1080326 - | S-adenosyl-methyltransferase LSL_1056 1081712 - 1081281 - | cell division protein MraZ TERM 1102 1081896 - 1081919 + r 76 -9.6 -3.0094 | opp_overlap 1081896 TTGCCAATAAAAAAA GCGACTGGAA TCTC TTCCAATCGC TCTATATCGCTACAA TERM 1103 1081919 - 1081896 - R 100 -11.8 -5.7946 | opp_overlap 1081896 TTGCCAATAAAAAAA GCGACTGGAA TCTC TTCCAATCGC TCTATATCGCTACAA LSL_1057 1082294 - 1081929 - | hypothetical protein lysC 1083504 - 1082308 - | aspartate kinase I LSL_1059 1083711 - 1083836 + | hypothetical protein TERM 1104 1083841 - 1083877 + T 100 -7.5 -5.48213 | gap 1, opp_overlap 1083841 TTATGAATTAAAAAA TGAGACT-GAGAAATC TTTTAT GACTTCTCTAGTCTCA TTTTTATTTTAGATA TERM 1105 1083877 - 1083841 - T 100 -9.7 -5.30155 | gap 1, opp_overlap 1083841 TTATGAATTAAAAAA TGAGACT-GAGAAATC TTTTAT GACTTCTCTAGTCTCA TTTTTATTTTAGATA LSL_1060 1084816 - 1083881 - | cell surface hydrolase, membrane-bound LSL_1061 1085688 - 1084831 - | polar amino acid ABC transporter substrate-binding protein LSL_1062 1086344 - 1085706 - | polar amino acid ABC transporter ATP-binding protein LSL_1063 1086998 - 1086357 - | polar amino acid ABC transporter permease TERM 1106 1087113 - 1087083 - R 100 -16.3 -5.40464 | TATCATAAACAAAAA GCCCTCCTAGATC TAGTC GATCTAAGAGGGC ACTATGAAAGTACGG minD 1088206 - 1087403 - | cell division inhibitor minC 1088879 - 1088208 - | cell division inhibitor TERM 1107 1088654 - 1088670 + g 72 -5.9 -4.38313 | opp_overlap 1088654 GTACTAAAAAATTAG GGTAGTT ATC AACTATC TTTTCAATTTCATGT TERM 1108 1088812 - 1088822 + g 71 -6.8 -4.22346 | opp_overlap 1088812 AATATCTGTGAAAAA GCAG CAT CTGC TTTTAACTCAATTTC TERM 1109 1088822 - 1088812 - G 76 -6.8 -4.59511 | opp_overlap 1088812 AATATCTGTGAAAAA GCAG CAT CTGC TTTTAACTCAATTTC mreD 1089409 - 1088897 - | rod shape-determining protein mreC 1090275 - 1089421 - | rod shape-determining protein TERM 1110 1090329 - 1090297 - R 75 -9.5 -2.82742 | overlap 1090327 ATCCTCCTATAACTA TTATTTTTCAAGTAA GAT TTACTCAAAAAATAA GCCGTATCACTAAAA mreB 1091397 - 1090390 - | rod shape-determining protein TERM 1111 1091034 - 1091054 + g 76 -2.6 -5.39755 | gap 1, opp_overlap 1091012 TAGCACCAGCTACTC GAGTTG-CA TCTA TGACAGCTC TTTTTTCTACTTCTG cspC 1091778 - 1091569 - | cold shock protein radC 1092469 - 1091792 - | DNA repair protein folC 1093824 - 1092523 - | folylpolyglutamate synthase / dihydrofolate synthase TERM 1112 1092821 - 1092839 + g 71 -6.8 -4.26327 | CTATCCGCAAATTCT TTTCTCAA AAG TTGGGAAA TTCTTTTCATCGCTG TERM 1113 1093910 - 1093880 - R 100 -8.5 -5.80248 | opp_overlap 1093880 TAACAGATAAAAAAA GATATATTATCCA TATAT CGGACAATATATC TTTCAGTTTTAAAAT valS 1096579 - 1093919 - | valyl-tRNA synthetase TERM 1114 1094540 - 1094564 + g 93 -10.9 -4.02005 | opp_overlap 1094540 1094542 1094547, overlap 1094548 TAGAATTTGATCTAA TACATAACGTA GGA TACGTTGTGTA TTCTTCTTAAGTTTT TERM 1115 1094564 - 1094540 - G 71 -8.7 -3.08471 | opp_overlap 1094540 1094548, overlap 1094542 1094547 TAGAATTTGATCTAA TACATAACGTA GGA TACGTTGTGTA TTCTTCTTAAGTTTT TERM 1116 1096485 - 1096498 + g 74 -5.3 -4.68424 | TCTTTATCTTCATTA GGTTT AAAT AAACC TTTTTCGATCCATTC TERM 1117 1096654 - 1096620 - R 100 -16.6 -5.33405 | overlap 1096645 TTTAGCAAAGAAAAA GGCATTGCCATCCTAC TTA ATAGGACGACAATGCC GTGGTACCACCTAAA thiI 1098102 - 1096885 - | thiamine biosynthesis protein TERM 1118 1097896 - 1097882 - G 70 -7.2 -3.89055 | opp_overlap 1097881 ATAGATGGTGAGAAA TTTTGG ATC CCAAAA ACTTGCTTCAAACGT TERM 1119 1098119 - 1098129 + r 75 -2.6 -5.63857 | TTTTTATCCTTTCAA TTAA GAA TTAA TTTTTTTGAATTTTT nifS 1099267 - 1098119 - | cysteine desulfurase / selenocysteine lyase TERM 1120 1098605 - 1098622 + g 74 -3.3 -5.28176 | overlap 1098606 ACCAGACATTAATGG TGCGATC ATAC GACCGCG TTTTTTATACATGAA TERM 1121 1099393 - 1099358 - R 100 -11.4 -5.27779 | opp_overlap 1099357 1099355 1099353 1099370 TCTAACAGCAAAAAA TTAGCTAATCAGCAGT TGTT ACTGTTAATTAGCTAA CTATACTTTTATTTA LSL_1075 1101114 - 1099402 - | septation ring formation regulator EzrA TERM 1122 1101008 - 1101022 + g 73 -4.3 -4.91046 | CTCAATTCTTCAAGC TGAGT TTGAT ACTCA TTTATTTGTTTTCTA LSL_1076 1101298 - 1101747 + | GAF domain-containing protein TERM 1123 1102014 - 1102036 + G 75 -10 -2.73443 | overlap 1102013 CGTCGTTTAGGTTTC TCTTTATCTG GTA CAGGTAAAGA ATTATCTCGTCGTCC rpsD 1101963 - 1102568 + | 30S ribosomal protein S4 TERM 1124 1102602 - 1102630 + F 100 -11.2 -5.04597 | gap 1 GATAACTCTTTTAAT CCCACTATTGTTC ATTT GAACA-TAGTGGG TTTTTATATATCCGT LSL_1078 1102717 - 1103199 + | hypothetical protein LSL_1079 1103221 - 1104492 + | recombination factor protein RarA TERM 1125 1104713 - 1104735 + F 100 -10.6 -5.47159 | opp_overlap 1104713 ATCATCGGAGACAAA GAGTTGGGAC ACT GTCTCAGCTC TTTTTATTTATTGAC LSL_1080 1104777 - 1105082 + | hypothetical protein LSL_1081 1105199 - 1105702 + | universal stress protein TERM 1126 1105752 - 1105715 - T 100 -15.9 -3.97056 | opp_overlap 1105721, overlap 1105721 TAATAATATATTAAA TTAAAAGGACGTGAG CGTAAAAT CTCACGTCCTTTTAA TTACGACCATAACAT TERM 1127 1105746 - 1105721 - T 95 -10.5 -4.6038 | opp_overlap 1105721, overlap 1105715 TATATTAAATTAAAA GGACGTGAG CGTAAAAT CTCACGTCC TTTTAATTACGACCA TERM 1128 1105721 - 1105746 + T 95 -10.5 -4.4078 | opp_overlap 1105715 1105721 TATATTAAATTAAAA GGACGTGAG CGTAAAAT CTCACGTCC TTTTAATTACGACCA LSL_1082 1106300 - 1105749 - | DNA-3-methyladenine glycosylase TERM 1129 1106430 - 1106404 - R 100 -8.1 -5.67063 | TTCACTATAAAAAAA CAACCATAGCT TTGTT AGCCATGATTG CCTCTAAAATTATAT ddlA 1107586 - 1106450 - | D-alanine--D-alanine ligase pepQ 1108783 - 1107710 - | Xaa-Pro dipeptidase TERM 1130 1108012 - 1108026 + g 84 -3.6 -5.65927 | AACTAATACCTGCTT TAATTG CCT CAATTG TTTTTTCTTTAGCTA TERM 1131 1108579 - 1108590 + g 74 -2.2 -5.52807 | TAATTGAATCTATAT CAGG ATTT TCTG TTTTTATTTGTTCTT TERM 1132 1108906 - 1108863 - R 84 -6.1 -5.20333 | TAGCCATAATAAAAA CCGGTACTTGCTATAAATT CTCCCT AGTTTATAGCTCATACCGG CTCCAAAAACTGCAA LSL_1085 1111645 - 1109162 - | putative surface protein TERM 1133 1109952 - 1109986 + g 75 -5 -4.87626 | opp_overlap 1109943, overlap 1109943 1109955 TTAAATGCAGCTTCA GCTTTAGCTACTGCAT CTT GTGCACTAGCTAATTC TTTTTGATATTCAGC TERM 1134 1109955 - 1109983 + g 100 -9.7 -4.53398 | overlap 1109952 AATGCAGCTTCAGCT TTAGCTACTGCAT CTT GTGCACTAGCTAA TTCTTTTTGATATTC TERM 1135 1110402 - 1110424 + g 80 -6.3 -4.6971 | opp_overlap 1110407 GCTGTTGACATCTTA GCAATTGCT AATGC AGCATTTGC TTTTGTTAAAGTTTC TERM 1136 1110746 - 1110764 + g 72 -6 -4.41616 | overlap 1110730 1110753 AGCATCTTTCAATGC TGTTTGTG CAG CACCAACA TTTGTTTGAGCAGCT TERM 1137 1110959 - 1110974 + g 71 -5.4 -4.47328 | overlap 1110961 1110967 1110968 TGAAACGATGTCATC TGCTGC TTTT GCAGTA TTTTGTGCTGCAGTT TERM 1138 1111794 - 1111826 + r 74 -7.9 -3.82628 | opp_overlap 1111794, overlap 1111792 AGTTTAATTAAAAAA TCGTACAATTATC TCTATAC GATAAATGTACGA TCTTTATTTGGGATA TERM 1139 1111826 - 1111794 - R 91 -7.9 -5.27477 | opp_overlap 1111792 1111794 AGTTTAATTAAAAAA TCGTACAATTATC TCTATAC GATAAATGTACGA TCTTTATTTGGGATA LSL_1086 1112479 - 1111928 - | hypothetical protein LSL_1087 1112925 - 1112482 - | hypothetical protein TERM 1140 1112994 - 1113032 + r 81 -10.5 -2.95113 | opp_overlap 1112999, overlap 1112999 AATTCAAGCACCTAA AAAAAGAGATGAGAAGA AAAAA TCTTCTCACCTCTTTTG GTTTAACTTTTCGAA TERM 1141 1112999 - 1113027 + r 95 -10.4 -4.59424 | opp_overlap 1112999, overlap 1112994 AAGCACCTAAAAAAA GAGATGAGAAGA AAAAA TCTTCTCACCTC TTTTGGTTTAACTTT TERM 1142 1113027 - 1112999 - R 100 -12.6 -5.49729 | opp_overlap 1112994 1112999 AAGCACCTAAAAAAA GAGATGAGAAGA AAAAA TCTTCTCACCTC TTTTGGTTTAACTTT LSL_1088 1115167 - 1113101 - | penicillin-binding protein TERM 1143 1116196 - 1116178 - g 70 -8.2 -3.31144 | TTCCTACTGCGATAA CCCTTACT AGC AGTAAAGG CCAATACACAGAAAG TERM 1144 1116571 - 1116582 + G 73 -4.4 -4.92757 | TTAATGTTAAGCCAT GGAA AATT TTCC TTTTATTCTTCATAG LSL_1089 1115412 - 1118057 + | hypothetical protein TERM 1145 1118060 - 1118114 + T 100 -11.9 -4.56153 | gap 1, opp_overlap 1118065, overlap 1118065 AGTTCATAAATAATT AAAAAGACCAATATGTCTA-TCTTCA TAAA TGAAGAATTGATATATTGGTCTTTTA TTGTTTTTATGCTAA TERM 1146 1118065 - 1118109 + T 100 -11.8 -5.18715 | gap 1, opp_overlap 1118065, overlap 1118060 ATAAATAATTAAAAA GACCAATATGTCTA-TCTTCA TAAA TGAAGAATTGATATATTGGTC TTTTATTGTTTTTAT TERM 1147 1118109 - 1118065 - T 100 -9.6 -5.05712 | gap 1, opp_overlap 1118065 1118060 ATAAATAATTAAAAA GACCAATATGTCTA-TCTTCA TAAA TGAAGAATTGATATATTGGTC TTTTATTGTTTTTAT apt 1118651 - 1118133 - | adenine phosphoribosyltransferase recJ 1121006 - 1118673 - | single-stranded-DNA-specific exonuclease LSL_1092 1121826 - 1121017 - | Short chain dehydrogenase LSL_1093 1122776 - 1121823 - | ribonuclease Z LSL_1094 1122922 - 1123254 + | hypothetical protein LSL_1095 1123333 - 1123587 + | hypothetical protein TERM 1148 1123602 - 1123626 + T 90 -5.1 -5.7946 | AAAAATTTTTTTCGA CAATCCTTG CATTTCA TAAGGATTG TTTTTTTATTGCAAA TERM 1149 1123685 - 1123645 - T 100 -10.7 -5.0538 | opp_overlap 1123647 TTTTATTGCAAAAAA TACCCTATAACTGTCAGCT TTT ATCTAACAATTATAGAGTA TGTAAGATTTTATTT LSL_1096 1125548 - 1123695 - | acyltransferase TERM 1150 1124451 - 1124477 + g 90 -8.2 -5.02476 | AAAGACTTGTTTAAC TTTGATTAGAGT TTG ACTGTAATCAAA TTTTTTCAAAGGTAT TERM 1151 1124679 - 1124663 - G 72 -5.1 -4.67353 | opp_overlap 1124663 CTATCCATGTAAAAA CTGGATT AGT AAACCAG GTATTCATATTAGCT obgE 1126877 - 1125579 - | GTPase ObgE TERM 1152 1126577 - 1126597 + g 72 -8.3 -3.41878 | CACCTAACAATTCTC CAGTTTCAG CAT CTGTAACTG TTGTACCTTGAGGAA uvrC 1128773 - 1127001 - | excinuclease ABC subunit C TERM 1153 1128422 - 1128446 + g 80 -6.5 -4.77759 | CATCCTTTTTAACTT GACTGACAATT TTT AATTGTGGGTC TTTTTCATGAGTTAT serA 1128911 - 1129867 + | glycerate dehydrogenase LSL_1100 1129948 - 1130085 + | hypothetical protein TERM 1154 1130098 - 1130131 + T 85 -9.1 -3.96327 | opp_overlap 1130104, overlap 1130104 TAATCGTTAAATATT TTAAAATCAGCAATT TTTG GATTGCTGATTTTTA TTTATAATAAAAAAT TERM 1155 1130104 - 1130125 + T 100 -8.1 -5.40464 | opp_overlap 1130104, overlap 1130098 TTAAATATTTTAAAA TCAGCAATT TTTG GATTGCTGA TTTTTATTTATAATA TERM 1156 1130125 - 1130104 - T 76 -7.4 -4.21827 | opp_overlap 1130104 1130098 TTAAATATTTTAAAA TCAGCAAT TTTTGG ATTGCTGA TTTTTATTTATAATA TERM 1157 1130176 - 1130146 - T 100 -9.9 -5.56673 | opp_overlap 1130146 ATTTATAATAAAAAA TGAGAACAACCTA TTATT CAAGTTGTTCTCA TTTTACATACGAATA TERM 1158 1130146 - 1130176 + T 74 -7 -4.18494 | opp_overlap 1130146 ATTTATAATAAAAAA TGAGAACAACCT ATTATTC AAGTTGTTCTCA TTTTACATACGAATA LSL_1101 1130860 - 1130342 - | phosphoesterase TERM 1159 1130658 - 1130668 + g 71 -5.4 -4.5448 | ATATTACCCTCCTCA GTTG CAA CAAC TTCTTTTTCTGGGTA LSL_1102 1131459 - 1130860 - | HAM1 protein LSL_1103 1131647 - 1132144 + | hypothetical protein TERM 1160 1132148 - 1132179 + T 100 -15.4 -5.04175 | opp_overlap 1132148 GAGGAACTATAAAAA GAGAACCTAAAGTT TAGC GACTTTAGGTTCTC TTTTTATCTAATTAG TERM 1161 1132179 - 1132148 - T 100 -14.7 -4.99861 | opp_overlap 1132148 GAGGAACTATAAAAA GAGAACCTAAAGT TTAGCG ACTTTAGGTTCTC TTTTTATCTAATTAG trxA 1132502 - 1132191 - | thioredoxin mutS 1134934 - 1132574 - | DNA mismatch repair protein LSL_1106 1135445 - 1134951 - | hypothetical protein LSL_1107 1135703 - 1135458 - | hypothetical protein LSL_1108 1136090 - 1135794 - | hypothetical protein LSL_1109 1136533 - 1136102 - | Holliday junction resolvase-like protein LSL_1110 1136805 - 1136545 - | hypothetical protein TERM 1162 1136969 - 1136920 - R 77 -7.5 -4.01137 | overlap 1136927 AAATTAATACAATAA TAAAAAATGATATTGCTAAGAAC TGTC ATCCCTATCAATATCACTCTTTA ATCTTATTTATTCAA TERM 1163 1136962 - 1136927 - R 87 -5.6 -5.68489 | overlap 1136920 TACAATAATAAAAAA TGATATTGCTAAGAAC TGTC ATCCCTATCAATATCA CTCTTTAATCTTATT alaS 1139615 - 1136973 - | alanyl-tRNA synthetase TERM 1164 1139712 - 1139657 - R 88 -7 -5.16681 | CCAAAAACAATAAAA CATCGTTGCTAGTAAGGACGCA ATTACTACGCGG TACCACCTTACTTGCAACGATG TCATCGTTAACCACT srmB 1141244 - 1139922 - | ATP-dependent RNA helicase LSL_1113 1142241 - 1141267 - | phosphoesterase, DHH family protein TERM 1165 1142364 - 1142326 - R 74 -5.5 -4.75174 | gap 1 TATTCAATTTAAAAA TCCTTGCA-TCAACAGCA TCAG TACTGTCAAATACAAGGA TACTAACTTTCAATA TERM 1166 1142852 - 1142820 - R 91 -7.2 -5.22258 | opp_overlap 1142820 TAAATTAAAACAAAA GAACTAAAGATATT CTCAT ATCATCTTTAGTTC TTTCTCTATATTTAT ackA 1144057 - 1142864 - | acetate kinase TERM 1167 1144230 - 1144206 - R 100 -12.3 -5.99154 | opp_overlap 1144206 TATCAAATAAAAAAA GCAGAAGACTT CGT AAATCTTCTGC TTCTAACGATCTTAC TERM 1168 1144206 - 1144230 + r 82 -10.1 -3.33315 | opp_overlap 1144206 TATCAAATAAAAAAA GCAGAAGACTT CGT AAATCTTCTGC TTCTAACGATCTTAC LSL_1115 1144973 - 1144242 - | hypothetical protein LSL_1116 1146483 - 1144966 - | iron-sulfur cluster-binding protein LSL_1117 1147290 - 1146484 - | hypothetical protein TERM 1169 1147571 - 1147522 - R 95 -5.7 -5.75599 | gap 2 TAAAGCACAAAAAAA TAGATATAGATA-A-AATTTATT TAAATT AATAAATTATATATCTATATCTA AAATTTAATGTTTTA LSL_1118 1149049 - 1147613 - | amino acid permease TERM 1170 1148783 - 1148771 - G 81 -7.7 -4.28548 | ACTTATCCATGAAAA TGCTG AAC CAGCA AAAGGCATGGCAGAG TERM 1171 1149200 - 1149180 - R 93 -6.1 -5.58454 | opp_overlap 1149180 1149194, overlap 1149194 GTCATATTAAAAAAA CGCCATCTT ATC AAGAAAGCG TTTCATTAATAAAGT LSL_1119 1149676 - 1149236 - | hypothetical protein TERM 1172 1149823 - 1149797 - R 100 -8.3 -5.75599 | opp_overlap 1149797 GAAAGCATAAAAAAA TATTAGTTTTT TCGTC AAAAACTAATA TTCTTTACCATTATT TERM 1173 1149797 - 1149823 + r 79 -8.3 -3.98291 | opp_overlap 1149797 GAAAGCATAAAAAAA TATTAGTTTTT TCGTC AAAAACTAATA TTCTTTACCATTATT LSL_1120 1150297 - 1149845 - | universal stress protein LSL_1121 1150696 - 1150400 - | hypothetical protein TERM 1174 1150793 - 1150832 + r 75 -8.2 -3.65754 | gap 1, opp_overlap 1150794 1150827, overlap 1150794 TCTTTAACTAAAAAA ACTTAACTTGTTAGAAAAG TAA TTTTTC-AACAAGTTAAGG TTTAAAATACTTTAT TERM 1175 1150794 - 1150831 + r 87 -11.7 -2.7873 | gap 1, opp_overlap 1150794 1150827, overlap 1150793 CTTTAACTAAAAAAA CTTAACTTGTTAGAAAAG TAA TTTTTC-AACAAGTTAAG GTTTAAAATACTTTA TERM 1176 1150831 - 1150794 - R 100 -11 -5.63103 | gap 1, opp_overlap 1150794 1150793, overlap 1150827 CTTTAACTAAAAAAA CTTAACTTGTTAGAAAA GTAAT TTTTC-AACAAGTTAAG GTTTAAAATACTTTA yajC 1151229 - 1150849 - | protein translocase subunit tgt 1152441 - 1151296 - | queuine tRNA-ribosyltransferase queA 1153500 - 1152457 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase ruvB 1154516 - 1153506 - | Holliday junction DNA helicase B TERM 1177 1153868 - 1153855 - G 70 -8.1 -3.1829 | opp_overlap 1153865, overlap 1153853 AGACGATTAGCAACA CGTGG AGTT CCACG AGAACGACGTGCTAT ruvA 1155160 - 1154555 - | Holliday junction DNA helicase mutL 1157156 - 1155177 - | DNA mismatch repair protein mutS 1159796 - 1157166 - | DNA mismatch repair protein TERM 1178 1159955 - 1159929 - R 83 -6.6 -4.76312 | opp_overlap 1159929 CACAATACTTAAAAA GCCGAGAAGA TAAAAAT TCTCCTCAGC TTCATTAATTACTTA LSL_1129 1161529 - 1159964 - | phosphodiesterase TERM 1179 1161694 - 1161660 - R 100 -12.4 -4.07568 | opp_overlap 1161664, overlap 1161664 CTTTTCCCTCGAAAA TAAACGACTTAAAAGC AAA ACTTTCAAGCCGTTTA AATAACTAATTATTC TERM 1180 1161690 - 1161664 - R 89 -8.8 -4.64861 | opp_overlap 1161664, overlap 1161660 TCCCTCGAAAATAAA CGACTTAAAAGC AAA ACTTTCAAGCCG TTTAAATAACTAATT recA 1162849 - 1161704 - | recombinase A TERM 1181 1163030 - 1163006 - R 100 -12.3 -5.53288 | TGTAATTCAAAAAAA TGTGAGAAGAA CAA TTCTTCCCACA TAATCAAAAAATTAT pgsA 1163629 - 1163042 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1182 1163658 - 1163635 - R 71 -7.6 -3.54489 | gap 1, opp_overlap 1163640 1163651, overlap 1163651 GTAAGTTCAAATTAA TCACT-CCTTA ATA TAAGGGAGTGA AATATCCACTCCCTA TERM 1183 1163671 - 1163651 - R 95 -11.9 -3.66288 | opp_overlap 1163651 1163640, overlap 1163635 CACTCCTTAATATAA GGGAGTGAA ATA TCCACTCCC TAAGTTAACGTTATT TERM 1184 1163651 - 1163671 + r 74 -9.7 -2.55818 | opp_overlap 1163635 1163651, overlap 1163640 CACTCCTTAATATAA GGGAGTGAA ATA TCCACTCCC TAAGTTAACGTTATT LSL_1132 1164608 - 1163682 - | transcriptional regulator fabG 1165415 - 1164690 - | 3-oxoacyl-[acyl-carrier protein] reductase TERM 1185 1165219 - 1165193 - G 77 -5.2 -5.00138 | CATCTAAACTAAAAA CTGAATTAGTTA ACT TATCTATTTCAG AAATTTTCGACATGT LSL_1134 1166722 - 1165421 - | M16 family peptidase TERM 1186 1166028 - 1166046 + g 82 -4.6 -5.54192 | GGAGCTCGTACAATC CTTTCTGT CTT AGAGAAAG TTTTTTTAGCTTGAT ftsK 1170418 - 1168139 - | cell division protein LSL_1136 1170967 - 1170455 - | 23S rRNA methyltransferase TERM 1187 1170631 - 1170642 + g 72 -5.8 -4.32678 | GTCGCATAAACATTT CTGG TAAA CCAG TTGTTTCTTTACCAA TERM 1188 1171044 - 1171007 - R 87 -5.5 -5.64274 | opp_overlap 1171008, overlap 1171008 TTATCCATAAAAAAA GCGTAGCCATTCGGTGT GGGC ACGGCGAACAGCTACGT TAATGAAGTACAATT TERM 1189 1171043 - 1171008 - R 85 -9 -3.9748 | opp_overlap 1171008, overlap 1171007 TATCCATAAAAAAAG CGTAGCCATTCGGTGT GGGC ACGGCGAACAGCTACG TTAATGAAGTACAAT LSL_1137 1172059 - 1171208 - | 23S rRNA m(1)G 745 methyltransferase TERM 1190 1171595 - 1171564 - G 71 -3.2 -5.10029 | overlap 1171570 ATGAAGGTGAAAAAA TATCAATAATAGCA TCAA TACTATTATCCATA AATGGAAGATTTGCT LSL_1138 1172574 - 1172059 - | transcriptional regulator guaC 1172799 - 1173776 + | guanosine 5'-monophosphate oxidoreductase TERM 1191 1173788 - 1173806 + F 100 -6.1 -5.86976 | opp_overlap 1173788 GTAATTACTTTAAAA GATTGTT TTTAT AACAATC TTTTTTATTTTGTAA TERM 1192 1173806 - 1173788 - f 70 -6.1 -4.17023 | opp_overlap 1173788 GTAATTACTTTAAAA GATTGTT TTTAT AACAATC TTTTTTATTTTGTAA TERM 1193 1174859 - 1174844 - g 88 -7.6 -5.186 | opp_overlap 1174843 1174844, overlap 1174836 CAAAAGACACAAAAA CTTGGT GTTG ACCAAG CTATTAGTTCATTTG gltP 1173980 - 1175257 + | proton/sodium-glutamate symport protein TERM 1194 1175317 - 1175291 - T 91 -8.1 -4.93365 | opp_overlap 1175291 1175281 TTCTATAATCAAAAA TGGCAATCC CAAAATCAT GGATTGCCA TTTTTTACTATAATT TERM 1195 1175291 - 1175317 + T 93 -8.1 -5.2422 | opp_overlap 1175291, overlap 1175281 TTCTATAATCAAAAA TGGCAATCC CAAAATCAT GGATTGCCA TTTTTTACTATAATT LSL_1141 1175888 - 1175325 - | copper homeostasis protein cutC LSL_1142 1176927 - 1175902 - | 6-phosphogluconolactonase LSL_1143 1177069 - 1177419 + | PTS system, glucitol/sorbitol-specific IIA component TERM 1196 1177483 - 1177523 + T 89 -10.7 -3.84451 | gap 1, opp_overlap 1177483, overlap 1177494 CATCAATAGTAAAAA GCGCTAGAAATCAACGTT TTCAAT AACGT-GGTTTTTAGCGC TTTAAGTTTCGAGAC TERM 1197 1177523 - 1177483 - T 80 -6.3 -4.89233 | gap 1, opp_overlap 1177483 1177494 CATCAATAGTAAAAA GCGCTAGAAATCAACGTT TTCAAT AACGTGGTTTT-TAGCGC TTTAAGTTTCGAGAC glmM 1178901 - 1177549 - | phosphoglucosamine mutase LSL_1145 1180040 - 1178925 - | hypothetical protein LSL_1146 1180885 - 1180037 - | hypothetical protein TERM 1198 1180331 - 1180343 + g 72 -9.1 -2.75036 | overlap 1180330 TAATGGTAAGTATGC TGCGG CTA CCGCA ATCTTGTTATCTTTG LSL_1147 1181118 - 1181801 + | hypothetical protein TERM 1199 1181834 - 1181797 - T 90 -10.1 -4.04764 | opp_overlap 1181799, overlap 1181789 1181799 AAAATAATTTAGAAA TATAAGAGGAGTAAG ATAATTCA CTTACTCCTCTTATT TTTAATCTTCACCAA TERM 1200 1181799 - 1181832 + T 100 -12.7 -4.87626 | opp_overlap 1181799 1181797 1181789 AATAATTTAGAAATA TAAGAGGAGTAAG ATAATTCA CTTACTCCTCTTA TTTTTAATCTTCACC TERM 1201 1181832 - 1181799 - T 100 -12.7 -3.59481 | opp_overlap 1181799, overlap 1181797 1181789 AATAATTTAGAAATA TAAGAGGAGTAAG ATAATTCA CTTACTCCTCTTA TTTTTAATCTTCACC murB 1182735 - 1181836 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1202 1182620 - 1182645 + g 74 -9.1 -3.08388 | opp_overlap 1182626, overlap 1182618 1182617 TCTTCAATGCTGTCA GGAAAAGCTAA TACG TCAGCTTTTCC TCCTGTTTTTGTATT dnaQ 1182884 - 1183417 + | DNA-directed DNA polymerase III, epsilon chain TERM 1203 1183476 - 1183419 - T 100 -10.2 -5.04377 | gap 1, opp_overlap 1183425, overlap 1183420 1183425 TTAAAATAAAATAAA TCAAAAGCACTGTAAAGATCTGACTTC TGTAC GTAATCAGATC-CTACAGTGCTTTTAT TAGCATCAAATATTA TERM 1204 1183475 - 1183420 - T 100 -13.7 -3.60186 | gap 1, opp_overlap 1183425, overlap 1183419 1183425 TAAAATAAAATAAAT CAAAAGCACTGTAAAGATCTGACTTC TGTAC GTAATCAGATC-CTACAGTGCTTTTA TTAGCATCAAATATT TERM 1205 1183470 - 1183425 - T 100 -11.4 -4.76478 | gap 1, opp_overlap 1183425, overlap 1183420 1183419 TAAAATAAATCAAAA GCACTGTAAAGATCTGACTTC TGTAC GTAATCAGATC-CTACAGTGC TTTTATTAGCATCAA TERM 1206 1183425 - 1183470 + T 79 -7 -4.65916 | gap 1, opp_overlap 1183425 1183420 1183419 TAAAATAAATCAAAA GCACTGTAAAGATCTGACTTC TGTAC GTAATCAGATCC-TACAGTGC TTTTATTAGCATCAA LSL_1150 1183941 - 1183489 - | ATP/GTP hydrolase pta 1184922 - 1183945 - | phosphate acetyltransferase ung 1185654 - 1184956 - | uracil-DNA glycosylase LSL_1153 1185793 - 1186668 + | HAD superfamily hydrolase LSL_1154 1186698 - 1187237 + | hypothetical protein TERM 1207 1187243 - 1187266 + T 100 -9.6 -5.38047 | opp_overlap 1187243 TTATTCATAAAAAAA CTCGTTGAAC AAAT GCTCAACGAG TTTTTTCTATCCATA TERM 1208 1187266 - 1187243 - T 100 -11.8 -5.64274 | opp_overlap 1187243 TTATTCATAAAAAAA CTCGTTGAAC AAAT GCTCAACGAG TTTTTTCTATCCATA smpB 1187740 - 1187273 - | SsrA-binding protein LSL_1156 1190165 - 1187766 - | ribonuclease R 1 TERM 1209 1188504 - 1188490 - G 71 -5.6 -4.54727 | GCTGCTAAACCAAAA TGTCCC AAT GGGTCA GGTGAGTATTTAGCT TERM 1210 1190227 - 1190206 - R 91 -8 -4.9725 | opp_overlap 1190206 ATTTGTATAGAAAAA CCCCCTGT AAATTA ACAGGAGG TTTATAGTAATTAGT secG 1190474 - 1190238 - | preprotein translocase subunit SecG TERM 1211 1190493 - 1190477 - R 71 -5.2 -4.60143 | opp_overlap 1190477, overlap 1190472 ACACATTATACAAAA GGAAAA CCTCC TTTTCC TTATACAGTAATACA eriC 1192072 - 1190534 - | chloride channel protein TERM 1212 1191360 - 1191329 - G 71 -5.4 -4.51847 | overlap 1191331 AAATAATTTATAAAA TCTATCAATATTTA AGGT TAAGTATTGATAAA CATATCCTAAGAGTC TERM 1213 1191508 - 1191486 - G 77 -4.8 -5.18866 | TTTAAAGAAACAAAA TTAGCTGCAA TTG CCGCTGCTAA AGAAGTTGTCCAAAC TERM 1214 1192216 - 1192177 - R 100 -9.6 -5.67967 | opp_overlap 1192177 1192176 ATCACCATAAAAAAA TACAGAATCAATCTATAA ATTA TTGTAAATTGATCCTGTA CTTTCTATATATTCT LSL_1159 1193433 - 1192252 - | multidrug resistance protein TERM 1215 1193487 - 1193460 - R 78 -5.7 -4.77165 | CCCTCTACAAGAAAA TACAGTCAAAC CTCCTT GTTCAACTGTA TCCTTAATTAATCTA baeS 1194978 - 1193500 - | two component system histidine kinase LSL_1161 1195697 - 1194978 - | two-component response regulator dinP 1196825 - 1195752 - | DNA polymerase IV TERM 1216 1196894 - 1196877 - R 100 -7.1 -5.60556 | opp_overlap 1196877 AATATAAAACAAAAA GAGATAA TTGC TTATCTC TTTAAATCATTTATA TERM 1217 1196877 - 1196894 + r 70 -7.1 -3.75295 | opp_overlap 1196877 AATATAAAACAAAAA GAGATAA TTGC TTATCTC TTTAAATCATTTATA TERM 1218 1196975 - 1196939 - R 100 -14.1 -3.79668 | opp_overlap 1196946 1196949, overlap 1196946 ATTCAATTTAGCAAA CAAAAAAGAATGTGATT AAT AATCACATTCTTTCTTA AGTCATAACAATTAC TERM 1219 1196968 - 1196946 - R 100 -12.2 -5.68438 | opp_overlap 1196946 1196949, overlap 1196939 TTAGCAAACAAAAAA GAATGTGATT AAT AATCACATTC TTTCTTAAGTCATAA TERM 1220 1196946 - 1196968 + r 100 -12.2 -4.21974 | opp_overlap 1196946 1196939, overlap 1196949 TTAGCAAACAAAAAA GAATGTGATT AAT AATCACATTC TTTCTTAAGTCATAA TERM 1221 1196949 - 1196965 + r 83 -8.1 -4.22554 | opp_overlap 1196946 1196939, overlap 1196946 GCAAACAAAAAAGAA TGTGATT AAT AATCACA TTCTTTCTTAAGTCA eno 1198312 - 1196987 - | enolase tpiA 1199181 - 1198426 - | triosephosphate isomerase pgk 1200436 - 1199234 - | phosphoglycerate kinase TERM 1222 1200036 - 1200052 + g 71 -6.6 -4.21438 | CAGTACTTGCCTAAT TCTGGA TCATT TCCAGA TTCTTTCTTACCATC TERM 1223 1200499 - 1200474 - R 100 -16.9 -5.19998 | opp_overlap 1200470 AGAATTAAAATAAAA GGCGGAAGGAG TAAC CTCCTCCCGCC TCAGTAACTTGCATT gapA 1201555 - 1200542 - | glyceraldehyde 3-phosphate dehydrogenase TERM 1224 1201146 - 1201164 + g 87 -10.4 -3.87104 | GCTGTGATTGCATCG TCGTTTAC ACC GTAAACGA TTGTTGTCATGTCAC LSL_1167 1202646 - 1201618 - | central glycolytic genes regulator TERM 1225 1202985 - 1202964 - H 85 -5.1 -5.64321 | ATAATAAAATAAAAA GCCAGCTCA ACAC TGAACCAGC TTAAAAATTAATTAT clpP 1203248 - 1203841 + | ATP-dependent Clp protease proteolytic subunit TERM 1226 1203860 - 1203885 + T 100 -7.7 -5.67063 | opp_overlap 1203860 ATACATTATAAAAAA GTTCCTAGA CCATAAAA TCTAGGAAC TTTTTTTATAGTACC TERM 1227 1203885 - 1203860 - T 100 -9.1 -5.35459 | opp_overlap 1203860 ATACATTATAAAAAA GTTCCTAGACC ATAA AATCTAGGAAC TTTTTTTATAGTACC LSL_1169 1204838 - 1203891 - | hypothetical protein LSL_1170 1205874 - 1204861 - | hypothetical protein LSL_1171 1206758 - 1205871 - | hypothetical protein TERM 1228 1206924 - 1206881 - R 90 -9.8 -4.30719 | gap 1, overlap 1206918 CCTTTTCACAAGAAA TAACCCGCA-ATCCAAAGTCA TCT TGCCTTTAGATATACGGGTCA AATCCGACACTCTAA LSL_1172 1207577 - 1206936 - | oxidoreductase luxS 1208071 - 1207601 - | S-ribosylhomocysteinase TERM 1229 1207694 - 1207679 - G 74 -6.2 -4.46212 | opp_overlap 1207679 1207681 TTCTTGAGCAGAAAA TAGAGA ATGG TCTCTA TAATTACCACAACTC TERM 1230 1207911 - 1207934 + g 71 -5.4 -4.62054 | gap 1, opp_overlap 1207916 ATATGTTCAATTGTA TGCAAT-CCAG CTG TTGGAATTGCA TTTTCATTTGGTTGA uvrA 1210981 - 1208147 - | excinuclease ABC subunit A TERM 1231 1210059 - 1210072 + g 73 -8.1 -3.56162 | CTGATAGGATTCCAT GGTGC AAGT GCACC TTCATTTAAAGTTTT uvrB 1213000 - 1211000 - | excinuclease ABC subunit B TERM 1232 1213090 - 1213123 + r 79 -8.3 -4.053 | opp_overlap 1213090 TAGAATTAATAAAAA CGTCTTACTACTAAT TTTT ATCAGTAATAAGACG TTTCTCTAAACTAAT TERM 1233 1213123 - 1213090 - R 100 -12.7 -5.2204 | opp_overlap 1213090 TAGAATTAATAAAAA CGTCTTACTACTAAT TTTT ATCAGTAATAAGACG TTTCTCTAAACTAAT glmM 1214875 - 1213148 - | phosphoglucomutase lgt 1215754 - 1214945 - | prolipoprotein diacylglyceryl transferase TERM 1234 1215618 - 1215597 - G 74 -5.9 -4.57503 | opp_overlap 1215595 1215597, overlap 1215600 GAATACAACAATAAA TCATAGATG TCAT CATCTAAGA TATTTTGTTTCCTTC hprK 1216701 - 1215769 - | HPr kinase/phosphorylase LSL_1179 1217127 - 1216774 - | hypothetical protein LSL_1180 1217469 - 1217131 - | stress-responsive transcriptional regulator PspC baeS 1218867 - 1217482 - | two component system histidine kinase TERM 1235 1218252 - 1218263 + g 71 -3 -5.08169 | GAATATAGATAGCAC TTGT CTCA ACAA TTTTTTGAACTGTAT LSL_1182 1219568 - 1218867 - | alkaline phosphatase synthesis transcriptional regulatory protein PhoP TERM 1236 1219258 - 1219244 - G 70 -7.2 -3.75105 | opp_overlap 1219241 TTAACCTAGCAACAA TTTCAC GTG GTGAAA AGGGTTTAGTCAAAT LSL_1183 1220711 - 1219584 - | hypothetical protein TERM 1237 1221014 - 1220994 - g 81 -9.9 -3.38522 | overlap 1220992 1220998 TATTGACCCTAAATA TCAATATAC TTC GTATATTGA AGAAAAAATTATTAA TERM 1238 1221192 - 1221181 - g 70 -4.4 -4.77165 | opp_overlap 1221160 1221181, overlap 1221160 1221159 CTTTCTATAAGAAAA CAGA AGTA TCTG TGTCCTGAATGCAAG TERM 1239 1221542 - 1221532 - g 74 -5.4 -4.71584 | opp_overlap 1221532 GAAAGAAATAATAAA TTCC TTA GGAA TTATTTCATTCAATA LSL_1184 1220929 - 1222218 + | ISL3 family transposase TERM 1240 1222252 - 1222231 - T 100 -6.7 -6.55664 | opp_overlap 1222231 TAAAACAAAAAAAAA CTATTAGAC TTTC ATCTAATAG TTTGAAAATAATAAT prfB 1223455 - 1222388 - | peptide chain release factor 2 TERM 1241 1222576 - 1222597 + g 73 -3.7 -5.12068 | overlap 1222581 CTAATTGTTCTCCTT GAATAGCAG CACG TTGCTTTTC TTTTTCTTCCATCTC TERM 1242 1222581 - 1222592 + g 74 -2.2 -5.42605 | overlap 1222576 TGTTCTCCTTGAATA GCAG CACG TTGC TTTTCTTTTTCTTCC TERM 1243 1223548 - 1223589 + r 78 -6.7 -4.37211 | opp_overlap 1223551 1223555, overlap 1223550 1223551 1223555 AATTTAGTCTGTATA CTATAAAGGCTAGAAAGAA GAAC TTCTTTCCAGTCTTTACTG TTTATTATCGCTTTA TERM 1244 1223550 - 1223587 + r 74 -7.9 -3.77491 | opp_overlap 1223551 1223555, overlap 1223548 1223551 1223555 TTTAGTCTGTATACT ATAAAGGCTAGAAAGAA GAAC TTCTTTCCAGTCTTTAC TGTTTATTATCGCTT TERM 1245 1223586 - 1223551 - R 86 -11.4 -2.62616 | opp_overlap 1223550 1223548 1223551 1223555, overlap 1223555 TTAGTCTGTATACTA TAAAGGCTAGAAAGAA GAAC TTCTTTCCAGTCTTTA CTGTTTATTATCGCT TERM 1246 1223551 - 1223586 + r 86 -11.4 -2.8541 | opp_overlap 1223551 1223555, overlap 1223550 1223548 1223555 TTAGTCTGTATACTA TAAAGGCTAGAAAGAA GAAC TTCTTTCCAGTCTTTA CTGTTTATTATCGCT TERM 1247 1223582 - 1223555 - R 77 -7.8 -4.0162 | opp_overlap 1223551 1223550 1223548 1223555, overlap 1223551 TCTGTATACTATAAA GGCTAGAAAGAA GAAC TTCTTTCCAGTC TTTACTGTTTATTAT TERM 1248 1223555 - 1223582 + r 77 -7.8 -4.08763 | opp_overlap 1223555 1223551, overlap 1223551 1223550 1223548 TCTGTATACTATAAA GGCTAGAAAGAA GAAC TTCTTTCCAGTC TTTACTGTTTATTAT secA 1225957 - 1223594 - | preprotein translocase subunit SecA LSL_1187 1227260 - 1226082 - | major facilitator transporter TERM 1249 1226898 - 1226880 - G 70 -4.6 -4.68424 | opp_overlap 1226870 1226880 TAATCCATTTAAAAA TGCTGA TTTTTCT TCAGCA TAATCTACAACCAAA TERM 1250 1227331 - 1227356 + r 78 -9.1 -3.55801 | opp_overlap 1227331 CTCATCAAAATAAAA TACCCCATAGA CTAA TCTATGGAGTA TTTAGAGCAATTAAT TERM 1251 1227356 - 1227331 - R 100 -11.3 -5.13722 | opp_overlap 1227331 CTCATCAAAATAAAA TACCCCATAGA CTAA TCTATGGAGTA TTTAGAGCAATTAAT LSL_1188 1227938 - 1227384 - | ribosome-associated factor Y xerC 1229326 - 1228181 - | Phage integrase LSL_1190 1230119 - 1229718 - | hypothetical protein LSL_1191 1230594 - 1230097 - | Cro/CI family phage transcriptional regulator TERM 1252 1230462 - 1230482 + g 77 -3.3 -5.41143 | AAAAGCCTAATTGTT TTTCTAACT CAC GGATAGAAA TTTTTTTAACCCGTG TERM 1253 1230546 - 1230595 + g 72 -9.1 -2.76453 | gap 1, overlap 1230548 TTTTAATACCTTTTA TATGCATTTTAATTCTATAT-TTA TGT TGACATGTAGAATTTAAATGCATA TAATTACCCTTGTAA LSL_1192 1230734 - 1230922 + | Phage repressor proteins LSL_1193 1230943 - 1231323 + | Phage immunity repressor LSL_1194 1231367 - 1231705 + | hypothetical protein LSL_1195 1231720 - 1231938 + | hypothetical protein LSL_1196 1231935 - 1232267 + | hypothetical protein LSL_1197 1232261 - 1232389 + | hypothetical protein TERM 1254 1232424 - 1232403 - f 85 -3 -5.94214 | AAGACAATAAAAAAA GCTAGGCA AATAAA TACCTAAC TTAACTAATTAGAAA LSL_1198 1232541 - 1232783 + | hypothetical protein LSL_1199 1232929 - 1232735 - | hypothetical protein LSL_1200 1232972 - 1233397 + | hypothetical protein LSL_1201 1233402 - 1234172 + | hypothetical protein LSL_1202 1234187 - 1235737 + | DNA primase TERM 1255 1235868 - 1235878 + F 81 -4 -5.67063 | AATACCTAACATGAG TATG TAA CATA TTTTTTTATAATAAA LSL_1203 1236048 - 1236356 + | hypothetical protein LSL_1204 1236415 - 1236855 + | hypothetical protein LSL_1205 1236862 - 1237086 + | hypothetical protein TERM 1256 1237135 - 1237155 + T 100 -7.6 -5.8187 | opp_overlap 1237137 ATACACTGACTTAAT GAGTGCTA TTAAT TGGCACTC TTTTTTTATTGCATC TERM 1257 1237325 - 1237304 - T 93 -5.1 -5.95449 | AAACAAAACAAAAAA GCCACGATA TAAA CACCGTAGC TCAATGACTAAAGAT TERM 1258 1238146 - 1238119 - T 79 -4.8 -5.24796 | overlap 1238120 TTCAGACAATAAAAA GGCTTGCCACTG TATC CAGCAACAAGCT AGAGATTATTATTCT TERM 1259 1238145 - 1238120 - T 75 -8.3 -3.73793 | overlap 1238119 TCAGACAATAAAAAG GCTTGCCACTG TATC CAGCAACAAGC TAGAGATTATTATTC comFC 1239118 - 1238432 - | ComF operon protein 3 LSL_1207 1240452 - 1239115 - | ComF operon protein 1 TERM 1260 1240527 - 1240499 - R 90 -9.1 -4.72846 | opp_overlap 1240499 CTATATACGCAAAAA TGACAGAAAAT GCTAAAT ATTTTCTGTCA TTTTTTATTTTTCTA TERM 1261 1240499 - 1240527 + r 100 -9.8 -5.98675 | opp_overlap 1240499 CTATATACGCAAAAA TGACAGAAAATG CTAAA TATTTTCTGTCA TTTTTTATTTTTCTA LSL_1208 1241623 - 1240532 - | undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase TERM 1262 1241772 - 1241731 - R 70 -6.2 -4.29325 | gap 1, opp_overlap 1241771, overlap 1241736 CATTAATACCTAAAA TAAAAT-AGGATTGACAAC TTAAC ATCGCCAATCCTTATTTTA ATTATTTTTTCAAAT LSL_1209 1243603 - 1241774 - | amino acid permease TERM 1263 1242962 - 1242945 - G 88 -7.1 -4.8543 | GAACCTGCAGAAAAA GCTTTTA AGAA TAAAAGC ACTGACATTCCAGGA TERM 1264 1243792 - 1243802 + r 82 -2.6 -5.95449 | AAATTAACTGTTAAT TATT CAA AATA TTTTTTATTTTATTT LSL_1210 1246189 - 1243787 - | cation-transporting ATPase TERM 1265 1245101 - 1245118 + g 70 -7.1 -3.86322 | TTTGCTCGTCTGTTT GCAATAA TTCC TTATTGC TTTCATAGTATTATT TERM 1266 1246350 - 1246313 - R 100 -14.5 -5.66684 | opp_overlap 1246313 1246317 TAATTTATAAAAAAA TAAACACTGAAATTTCA CGAC CGAAATCTCAGTGTTTA TTACTTATTTCTAAT TERM 1267 1246313 - 1246350 + r 93 -11.6 -3.66301 | opp_overlap 1246313, overlap 1246317 TAATTTATAAAAAAA TAAACACTGAAATTTC ACGACC GAAATCTCAGTGTTTA TTACTTATTTCTAAT TERM 1268 1246317 - 1246346 + r 85 -8 -4.42287 | opp_overlap 1246313, overlap 1246313 TTATAAAAAAATAAA CACTGAAATTTC ACGACC GAAATCTCAGTG TTTATTACTTATTTC groEL 1248007 - 1246385 - | chaperonin GroEL groS 1248321 - 1248037 - | 10 kDa chaperonin GROES TERM 1269 1248445 - 1248456 + H 85 -3 -5.95539 | opp_overlap 1248445, overlap 1248434 TTATCACTCGACACA TTAG AGTG CTAA TTTTTTTATTTGACC LSL_1213 1248505 - 1249146 + | CAAX family protease TERM 1270 1249167 - 1249209 + T 100 -10.3 -5.45802 | gap 1, opp_overlap 1249167 GTTAATATCAAAAAA TTGCTGAAGATTAATGAT TAGATAAC ATCAT-AATCTTCAGCAA TTTTTATTTTGAAAC TERM 1271 1249209 - 1249167 - T 100 -10.3 -5.27779 | gap 1, opp_overlap 1249167 GTTAATATCAAAAAA TTGCTGAAGATTAATGAT TAGATAAC ATCAT-AATCTTCAGCAA TTTTTATTTTGAAAC LSL_1214 1249889 - 1249248 - | redox-sensing transcriptional repressor Rex TERM 1272 1250254 - 1250241 - g 77 -5.3 -4.91873 | CAGATGAAGGAAAAA TCGTT ACTA AACGA GATTTAACCATTGGA TERM 1273 1251455 - 1251443 - g 70 -4.1 -4.78753 | TTAACATTAACAAAA CTTGC TCT ACAAG AAGATAATTTCTTAA TERM 1274 1251782 - 1251771 - g 82 -3 -5.71983 | TTAACTATAAAAAAA GTAA AGAA TTAC AAAAACAACAGCGTA LSL_1215 1250063 - 1252012 + | ABC transporter, ATP-binding protein TERM 1275 1252072 - 1252017 - T 83 -4.5 -5.59534 | gap 3, overlap 1252033 AATTACAATAAAAAA GATGTAAGACTTA--AT-ACCAGAGTTA TGC TCACTCTAGTCATACTAAGTCTCACATC TTTTTATTTTTCTAC gcp 1253107 - 1252076 - | O-sialoglycoprotein endopeptidase rimI 1253637 - 1253131 - | ribosomal-protein-S18-alanine acetyltransferase TERM 1276 1253370 - 1253382 + g 74 -6.3 -4.2828 | opp_overlap 1253370 CTGCAAAATTAGTAA TGTGA GCT TCACA TTTTAGTGGATAAAA LSL_1218 1254373 - 1253642 - | glycoprotein endopeptidase TERM 1277 1253903 - 1253917 + g 70 -4.3 -4.67563 | opp_overlap 1253903, overlap 1253896 ATCTTCACCAATAAA GACAA CTTCA TTGTC TTTTAATTTCTCTTG TERM 1278 1254216 - 1254226 + g 77 -3.2 -5.53991 | TCTATTTCTTGAATC GTTG TTG CAGC TTTTTTTAATAAATC ansB 1254525 - 1255505 + | L-asparaginase TERM 1279 1255566 - 1255517 - T 100 -16.1 -4.61747 | opp_overlap 1255519 1255520, overlap 1255520 GTAATAAGCATAAAA TAAGCACTGACAATAAATAGAAT TATC ATTCTACCTATTGTCAGTGCCTT TTCTTTTATATCCAC TERM 1280 1255519 - 1255564 + T 100 -12.1 -5.23292 | opp_overlap 1255517 1255520, overlap 1255520 AATAAGCATAAAATA AGCACTGACAATAAATAGAAT TATC ATTCTACCTATTGTCAGTGCC TTTTCTTTTATATCC TERM 1281 1255520 - 1255563 + T 100 -15.6 -3.72348 | opp_overlap 1255517 1255520, overlap 1255519 ATAAGCATAAAATAA GCACTGACAATAAATAGAAT TATC ATTCTACCTATTGTCAGTGC CTTTTCTTTTATATC TERM 1282 1255563 - 1255520 - T 100 -20 -4.39226 | opp_overlap 1255520 1255519, overlap 1255517 ATAAGCATAAAATAA GCACTGACAATAAATAGAAT TATC ATTCTACCTATTGTCAGTGC CTTTTCTTTTATATC LSL_1220 1256309 - 1255572 - | Acyl-acyl carrier protein thioesterase LSL_1221 1257202 - 1256321 - | tetrapyrrole (Corrin/Porphyrin) methylase family protein LSL_1222 1257546 - 1257202 - | initiation-control protein holB 1258553 - 1257561 - | DNA polymerase III subunit delta' tmk 1259214 - 1258588 - | thymidylate kinase TERM 1283 1259324 - 1259294 - R 100 -8.4 -5.75538 | opp_overlap 1259294 TGCAAAAAATAAAAA GAGGAACTGCTATT TTA AATTACAATTCCTC TTTCTTTAATTAATG LSL_1225 1259573 - 1259334 - | hypothetical protein recR 1260186 - 1259587 - | recombination protein LSL_1227 1260527 - 1260213 - | hypothetical protein dnaX 1262284 - 1260545 - | DNA polymerase III subunit gamma/tau TERM 1284 1261372 - 1261392 + g 73 -9.1 -2.86785 | overlap 1261371 1261374 ATAAACCTAATTCGC CATCAGAAA CCA TTTCTGGTG CTTGTTGGTATAATA TERM 1285 1262352 - 1262320 - R 85 -2.8 -6.15828 | gap 2, overlap 1262321 1262349 TTCATCAAAAAAAAA TCTCTCGG--TTGCTC CAA GAACAAAACCGAGAGT TAACATTTCATATTA TERM 1286 1262351 - 1262321 - R 70 -6.3 -4.2787 | gap 2, overlap 1262320 1262349 TCATCAAAAAAAAAT CTCTCGG--TTGCTC CAA GAACAAAACCGAGAG TTAACATTTCATATT LSL_1229 1262991 - 1262491 - | cytosine/adenosine deaminase grxC 1263819 - 1264049 + | glutaredoxin nrdI 1264046 - 1264429 + | ribonucleotide reductase stimulatory protein TERM 1287 1264514 - 1264526 + G 72 -4.8 -4.66163 | opp_overlap 1264514 1264512 1264508 AGGAAAAGATGAAGA GGCT CTTGA AGCC TTTTTAAATGAAAAT nrdA 1264410 - 1266581 + | ribonucleotide-diphosphate reductase subunit alpha nrdF 1266599 - 1267579 + | ribonucleotide-diphosphate reductase subunit beta TERM 1288 1267591 - 1267626 + T 100 -10.7 -5.35459 | opp_overlap 1267591 ATAGATAAATAAAAA TATCCTCGTCAAT CGATCTGAAA ATTGACGAGGATA TTTTTTATACTATAT TERM 1289 1267626 - 1267591 - T 100 -11.4 -5.4433 | opp_overlap 1267591 ATAGATAAATAAAAA TATCCTCGTCAATC GATCTGAA AATTGACGAGGATA TTTTTTATACTATAT LSL_1234 1270229 - 1267656 - | hypothetical protein LSL_1236 1270758 - 1270315 - | hypothetical protein TERM 1290 1270849 - 1270826 - R 93 -8.2 -5.24989 | TTATATATGAAAAAA GAGACCAGTC GTTA AACTGATCTC TAAAAGTAAAATTAA rplL 1271239 - 1270871 - | 50S ribosomal protein L12P rplJ 1271814 - 1271311 - | 50S ribosomal protein L10 TERM 1291 1271866 - 1271847 - R 79 -8 -4.08767 | opp_overlap 1271847, overlap 1271865 GTCATTGTGTCAAAA GCTTTTTA TAAA TAAAAAGC TCTATGTCCACACCA TERM 1292 1271847 - 1271866 + r 70 -8 -2.98823 | opp_overlap 1271847 1271865 GTCATTGTGTCAAAA GCTTTTTA TAAA TAAAAAGC TCTATGTCCACACCA TERM 1293 1271892 - 1271865 - R 72 -2.7 -5.38054 | opp_overlap 1271847, overlap 1271847 1271866 TTTTATAAATAAAAA GCTCTATGTCC ACACCA AGACACAGAGA GAGATACGTTTACTC TERM 1294 1272045 - 1272023 - R 100 -8.5 -5.80727 | opp_overlap 1272022 AAAAATAATAAAAAA GTGAGAAGA ATTTA TCTTCCCAC CTCATTATTTAAATT rplA 1272751 - 1272059 - | 50S ribosomal protein L1 rplK 1273279 - 1272854 - | 50S ribosomal protein L11 nusG 1273962 - 1273402 - | transcription antitermination protein LSL_1242 1274244 - 1274077 - | protein translocase subunit secE rpmG 1274416 - 1274264 - | 50S ribosomal protein L33 LSL_1244 1275011 - 1274481 - | hypothetical protein spoU 1275759 - 1275013 - | tRNA/rRNA methyltransferase TERM 1295 1275543 - 1275576 + g 81 -8.3 -4.19735 | overlap 1275534 1275564 TAGCAATCACTACTC CTTGGTGATTTTGTC CATT GACTAAATTATCAAG TTTAGTTTTAGGAAC LSL_1246 1276166 - 1275759 - | hypothetical protein cysS 1277571 - 1276159 - | cysteinyl-tRNA synthetase TERM 1296 1277691 - 1277666 - R 80 -5.4 -5.2894 | opp_overlap 1277666 AAACATAAAACAAAA GGTTGCGACA AAAATA TGCCTCAACC TTGTCTCATTTTAAT gltX 1279212 - 1277725 - | glutamyl-tRNA synthetase TERM 1297 1278820 - 1278840 + g 72 -2.6 -5.29445 | gap 2, opp_overlap 1278820, overlap 1278822 ATATTCATAGACATA GC--GAGGAG CTT CTCCTCTAGC TTTTTGTTCTTCACG TERM 1298 1278822 - 1278836 + g 76 -10 -2.95224 | opp_overlap 1278820, overlap 1278820 ATTCATAGACATAGC GAGGAG CTT CTCCTC TAGCTTTTTGTTCTT LSL_1249 1280455 - 1279343 - | PilT family ATPase TERM 1299 1279950 - 1279936 - G 78 -7.2 -4.2828 | opp_overlap 1279927 1279935 TCCCATCTATCAAAA TGTTAG TAT CTAACA ACTTATATTTGTGGA radA 1281854 - 1280481 - | DNA repair protein RadA dut 1282408 - 1281872 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 1300 1282318 - 1282302 - G 74 -2.3 -5.4833 | overlap 1282304 CTAGGTAATAAAAAA TCTTCTG CAG CAAAAAA ATCATATCCTGCAGC wecD 1282564 - 1282842 + | acetyltransferase TERM 1301 1284221 - 1284206 - g 83 -6.2 -5.03945 | GAAGAATTACAAAAA GTTCTT ACTG AAGAAC CTAAAGTCTTAGCTC pepC 1282931 - 1284265 + | aminopeptidase C TERM 1302 1284307 - 1284333 + F 77 -8.9 -3.33434 | opp_overlap 1284307 1284306 1284310, overlap 1284310 TTATTTGACAACAAC TAAGGTGATTG CTTTT TAATCACCTTA TTACATATTTTTAAT TERM 1303 1284567 - 1284556 - g 89 -3 -5.89827 | opp_overlap 1284556 AATTATGAAAAAAAA CAAT CTGA ATTG TTAGATATTATTGAT LSL_1254 1284475 - 1284828 + | bacteriocin immunity protein TERM 1304 1284941 - 1284911 - T 100 -14.2 -4.66833 | opp_overlap 1284911 TTCTAAGTGTAAAAA GCTCTATGAGAACT AGT AGTTTTCATAGAGC TTTTTTACTTAATAA TERM 1305 1284911 - 1284941 + T 100 -16.4 -5.30155 | opp_overlap 1284911 TTCTAAGTGTAAAAA GCTCTATGAGAACT AGT AGTTTTCATAGAGC TTTTTTACTTAATAA TERM 1306 1285010 - 1285027 + T 74 -6.3 -4.42721 | TTATTTTAGTATTTT CTTTGAG ATTA CTCGAAG TTTATTATCTAATTC gpmA 1285669 - 1284995 - | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase LSL_1256 1286635 - 1285691 - | malate permease fabH 1287674 - 1286694 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1307 1287476 - 1287488 + g 82 -4.1 -5.58074 | CAGACTTAAGATTTG CTCTT TCT AGGAG TTTTTTTCCTACTTC TERM 1308 1287753 - 1287726 - R 100 -6.3 -5.86976 | TTATAAAATAAAAAA GCATAGTAGCC AATATA GACTCCTATGC TCACCTCTGTATGCG LSL_1258 1288334 - 1287897 - | hypothetical protein LSL_1259 1290498 - 1288327 - | transcription accessory protein nadE 1291395 - 1290568 - | NAD synthetase pncB 1292881 - 1291415 - | nicotinate phosphoribosyltransferase TERM 1309 1293656 - 1293668 + G 76 -6.3 -4.57533 | opp_overlap 1293654 1293656 TTTTTGGCAAAAACA CCATT TAG AATGG TTTTATCGTCTTCTT LSL_1262 1293033 - 1293767 + | N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TERM 1310 1293780 - 1293826 + T 76 -6.2 -4.71828 | gap 1, opp_overlap 1293783, overlap 1293783 TAAGTTAGTATACAA AAATGGCTTAAAATC-ATGTT ACTCAC AACATTGATTCTAAGCCATTA TTTTATTGCTACACT TERM 1311 1293783 - 1293823 + T 82 -7.9 -4.46587 | gap 1, opp_overlap 1293783, overlap 1293780 GTTAGTATACAAAAA TGGCTTAAAATC-ATGTT ACTCAC AACATTGATTCTAAGCCA TTATTTTATTGCTAC TERM 1312 1293823 - 1293783 - T 100 -10.8 -5.00895 | gap 1, opp_overlap 1293783 1293780 GTTAGTATACAAAAA TGGCTTAAAATCA-TGTTA CTCA CAACATTGATTCTAAGCCA TTATTTTATTGCTAC LSL_1263 1294538 - 1293840 - | GntR family transcriptional regulator proC 1295348 - 1294554 - | pyrroline-5-carboxylate reductase TERM 1313 1294738 - 1294754 + g 76 -4.4 -5.04356 | CCTAAAACGGCTTGT GCAGCT ATTTG AGTTGC TTTTTGCTTATTTAA TERM 1314 1295304 - 1295319 + g 73 -7.6 -3.74251 | opp_overlap 1295306 CATTAGACCTTCAAT TATGGC CTTT GCCATA TTTCCTACACCTATG TERM 1315 1295421 - 1295398 - R 100 -10.4 -5.83226 | AATGTAATAAAAAAA CGCAAATCAT CAAC ATGATCTGCG CTAGAATTGGGGTAG TERM 1316 1295726 - 1295703 - R 83 -6 -5.15634 | opp_overlap 1295703 TATTTCAGTAAAAAA GAGCCTAGCA TATC CACTAGACTC TTCTAAACTAATTTT LSL_1265 1297209 - 1295740 - | di-/tripeptide transporter TERM 1317 1297434 - 1297449 + r 74 -9 -3.17797 | opp_overlap 1297434 ATGGTATTAAAAAAA GGAGCA TATC TGCTCC TTAAATCTATATAGC TERM 1318 1297449 - 1297434 - R 100 -9 -5.52986 | opp_overlap 1297434 ATGGTATTAAAAAAA GGAGCA TATC TGCTCC TTAAATCTATATAGC TERM 1319 1300273 - 1300292 + r 82 -9.4 -3.66803 | opp_overlap 1300272 1300271 TTCAGTCCTACAACC CTAAGAAG CGAG CTTCTTAG TTTGGGCTCTTCCCG TERM 1320 1300725 - 1300701 - R 95 -8.7 -5.00196 | overlap 1300703 TTTCAAAGAACAAAA TCTTGAGAGAT ATG ACCTCTCAAAA CTAAACAAAGTATCC TERM 1321 1300723 - 1300703 - R 72 -9.1 -2.74335 | overlap 1300701 TCAAAGAACAAAATC TTGAGAGAT ATG ACCTCTCAA AACTAAACAAAGTAT TERM 1322 1300789 - 1300808 + r 72 -9.2 -2.65808 | opp_overlap 1300780 1300777, overlap 1300786 1300786 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 1323 1302149 - 1302107 - R 71 -7.9 -3.48689 | gap 1, opp_overlap 1302107 AAAGCGATAGCAGAA CCATCTTTCATCTAAGGATC ATGC GATCCTTAGA-GATATACGG TATTAGCACCTGTTT TERM 1324 1302414 - 1302426 + r 76 -6.3 -4.67692 | overlap 1302421 AAGCCCTGCACATTT GTTTC ATC GAAAC TTTGTTTAGTTTTCA LSL_1266 1303635 - 1302751 - | ribonuclease BN LSL_1267 1304096 - 1303653 - | hypothetical protein TERM 1325 1303796 - 1303814 + g 71 -3.2 -5.03715 | overlap 1303795 1303798 CGCCTGCTTTAACTG TATAAGTA ATA TACTTAGA TTTTTTAGAACTACT TERM 1326 1304132 - 1304116 - R 76 -5.3 -5.03314 | TTCACCTCTAAAAAA TTAATTA GAT TAATTAA CATACCTAACCTATT TERM 1327 1304189 - 1304161 - R 93 -8.3 -5.1417 | opp_overlap 1304161 TTATAAAATTAAAAA GCCTGAAAAGA AACAAAA TCTTTTCAGAC TCCTATAAAAATAAT galU 1305085 - 1304213 - | UTP--glucose-1-phosphate uridylyltransferase TERM 1328 1305244 - 1305210 - R 100 -7.5 -5.60993 | gap 1, opp_overlap 1305210 1305213 GCTTTCATAAAAAAA TAAGTACTTAATTGCT TAGA AACAAT-AAGTACTTA CTTTTTTATGCTAAT map 1306046 - 1305255 - | methionine aminopeptidase fldA 1306203 - 1306658 + | flavodoxin TERM 1329 1307015 - 1307029 + G 73 -3.6 -5.19261 | overlap 1307026 GACCAAGTAGTAATC GTAGTT CTG AATTAC TTTTTTAGTAAATTT LSL_1271 1306658 - 1307068 + | cell wall teichoic acid glycosylation protein gtcA TERM 1330 1307222 - 1307232 + G 100 -6.8 -6.02919 | TATTCAATTTCATTT GCGA TAG TCGC TTTTTTTGTTTATGG LSL_1272 1307159 - 1310017 + | hypothetical protein TERM 1331 1310065 - 1310015 - T 79 -3.6 -5.52096 | gap 1, opp_overlap 1310020 1310026 1310059, overlap 1310018 1310020 1310026 AAATTTAAGAAAAAA TAATATTAAAAGGAAGCAAAGAT TTTTTG ATCTTTGCTTCCTTTTTAG-TTG CTAACTCTTTAATTT TERM 1332 1310063 - 1310018 - T 87 -7.8 -4.81306 | opp_overlap 1310020 1310026 1310059, overlap 1310015 1310020 1310026 TTTAAGAAAAAATAA TATTAAAAGGAAGCAAAGAT TTTTTG ATCTTTGCTTCCTTTTTAGT TGCTAACTCTTTAAT TERM 1333 1310061 - 1310020 - T 100 -14.8 -4.00001 | opp_overlap 1310020 1310026 1310059, overlap 1310018 1310015 1310026 TAAGAAAAAATAATA TTAAAAGGAAGCAAAGAT TTTTTG ATCTTTGCTTCCTTTTTA GTTGCTAACTCTTTA TERM 1334 1310020 - 1310061 + T 100 -15.5 -2.53701 | opp_overlap 1310018 1310015 1310020 1310026, overlap 1310026 1310059 TAAGAAAAAATAATA TTAAAAGGAAGCAAAGATT TTTT GATCTTTGCTTCCTTTTTA GTTGCTAACTCTTTA TERM 1335 1310055 - 1310026 - T 100 -13.8 -4.53703 | opp_overlap 1310020 1310026, overlap 1310020 1310018 1310015 AAAATAATATTAAAA GGAAGCAAAGAT TTTTTG ATCTTTGCTTCC TTTTTAGTTGCTAAC TERM 1336 1310026 - 1310055 + T 100 -14.5 -4.90266 | opp_overlap 1310026 1310020 1310018 1310015, overlap 1310020 AAAATAATATTAAAA GGAAGCAAAGATT TTTT GATCTTTGCTTCC TTTTTAGTTGCTAAC LSL_1273 1311060 - 1310074 - | ornithine cyclodeaminase TERM 1337 1310175 - 1310147 - G 73 -8.3 -3.6944 | opp_overlap 1310154, overlap 1310154 TCTGCAATATAAACA TCTAAAACAGCTG TTC CAACTGTCTTAAA AATAGTTATTTCATC TERM 1338 1310168 - 1310154 - G 74 -6.4 -4.33907 | opp_overlap 1310154, overlap 1310147 TATAAACATCTAAAA CAGCTG TTC CAACTG TCTTAAAAATAGTTA LSL_1274 1311940 - 1311074 - | hypothetical protein LSL_1275 1312752 - 1311958 - | transcriptional regulator TERM 1339 1312918 - 1312887 - R 86 -6 -5.49809 | opp_overlap 1312892, overlap 1312892 CAAATTGTAAAAAAA TAAAACTAGTCGTC AGAA AACAACTAGTCCTA TTACTATTATTCAAA TERM 1340 1312913 - 1312892 - R 90 -5.9 -5.55855 | opp_overlap 1312892, overlap 1312887 TGTAAAAAAATAAAA CTAGTCGTC AGAA AACAACTAG TCCTATTACTATTAT wecB 1314073 - 1312925 - | UDP-N-acetylglucosamine 2-epimerase TERM 1341 1313756 - 1313738 - G 82 -7.4 -4.46926 | opp_overlap 1313743 1313752, overlap 1313740 TATTTGATTATAAAA TGCTGCTA CAC TTGCAGCA AATGTAGTTGTTGTA TERM 1342 1313743 - 1313763 + g 73 -6.9 -3.93398 | opp_overlap 1313738 1313740, overlap 1313752 GATTATAAAATGCTG CTACACTTG CAG CAAATGTAG TTGTTGTATCTCCAT ampS 1314193 - 1315377 + | aminopeptidase S TERM 1343 1315395 - 1315425 + F 82 -7.7 -4.40333 | gap 1, opp_overlap 1315395 1315396, overlap 1315396 ACAACACTGCTAAAA T-GCGCTTGAGAGG AATT TTTCTCAAGCGCTA TTTATATTGTTTAAA TERM 1344 1315424 - 1315395 - f 77 -7.9 -4.14874 | opp_overlap 1315395 1315396, overlap 1315396 ACAACACTGCTAAAA TGCGCTTGAGA GGAATTTT TCTCAAGCGCT ATTTATATTGTTTAA TERM 1345 1315396 - 1315423 + F 100 -12.8 -3.79177 | opp_overlap 1315395 1315396, overlap 1315395 CAACACTGCTAAAAT GCGCTTGAGAGG AATT TTTCTCAAGCGC TATTTATATTGTTTA TERM 1346 1315423 - 1315396 - f 87 -11.4 -3.08201 | opp_overlap 1315396 1315395, overlap 1315395 CAACACTGCTAAAAT GCGCTTGAGA GGAATTTT TCTCAAGCGC TATTTATATTGTTTA LSL_1278 1315689 - 1317296 + | amino acid permease TERM 1347 1317332 - 1317303 - T 93 -9.4 -4.71418 | opp_overlap 1317303 AATATTTAAAAGAAA TGAGGATTAGAG TTCTTT CTCTGATCCTCA TTTTTATACGCAAAA TERM 1348 1317303 - 1317332 + T 100 -11.6 -4.82901 | opp_overlap 1317303 AATATTTAAAAGAAA TGAGGATTAGAG TTCTTT CTCTGATCCTCA TTTTTATACGCAAAA TERM 1349 1317376 - 1317351 - T 88 -6.3 -5.50499 | opp_overlap 1317351 TTATACGCAAAAAAA GATATTAACCA AAAT CAGTTAATATC TTCTTCTCTCAATCA LSL_1279 1318079 - 1317408 - | Beta-phosphoglucomutase / glucose-1-phosphate phosphodismutase mapA 1320353 - 1318089 - | maltose phosphorylase galM 1321360 - 1320368 - | aldose 1-epimerase LSL_1282 1322719 - 1321364 - | sugar transporter malR 1323870 - 1322875 - | maltose operon transcriptional repressor TERM 1350 1323508 - 1323498 - G 76 -2.6 -5.47159 | TCGAATAAAGAAAAA TAAA GTT TTTA ACATTACCCCTATTT TERM 1351 1323965 - 1324007 + r 70 -7.4 -3.71944 | gap 1, opp_overlap 1323959 1323957 1323972, overlap 1323961 1323957 TATTAAAGACATATA TAAAAAAGATAGG-TAACA TTTAAC TGTCAACCTATCTTTTTTA TATTATTCTTTTGTA TERM 1352 1324000 - 1323972 - R 76 -3.3 -5.4492 | gap 1, opp_overlap 1323965 1323961 1323957, overlap 1323959 1323957 GACATATATAAAAAA GATAGG-TAACA TTTAAC TGTCAACCTATC TTTTTTATATTATTC kup 1326034 - 1324010 - | Kup system potassium uptake protein TERM 1353 1326103 - 1326060 - R 83 -10.4 -3.34894 | opp_overlap 1326061, overlap 1326061 1326068 AATCGTTTTTAAATA CTTAAAAAGCCGGGAAAACC TACT GGCTCCCCCGACTGTTTAAA TTGCTATCTCGGTAT TERM 1354 1326102 - 1326061 - R 87 -11.7 -2.60615 | opp_overlap 1326061, overlap 1326060 1326068 ATCGTTTTTAAATAC TTAAAAAGCCGGGAAAACC TACT GGCTCCCCCGACTGTTTAA ATTGCTATCTCGGTA TERM 1355 1326095 - 1326068 - R 100 -9.8 -4.77986 | opp_overlap 1326061, overlap 1326061 1326060 TTAAATACTTAAAAA GCCGGGAAAACC TACT GGCTCCCCCGAC TGTTTAAATTGCTAT LSL_1285 1326706 - 1326293 - | hypothetical protein srmB 1328019 - 1326739 - | ATP-dependent RNA helicase TERM 1356 1326978 - 1326968 - G 71 -5.4 -4.46212 | TTTTCTATCACAAAA TCTG TTC CAGA CATTAATTGTTTGAA LSL_1287 1329048 - 1328038 - | oxidoreductase LSL_1288 1329287 - 1329646 + | hypothetical protein TERM 1357 1329659 - 1329680 + T 87 -4.5 -5.75342 | TAGCAATTATTTCAC CAGTCTT AGTTTTAA AAGACTG TTTTTTTTACAAAAA TERM 1358 1329747 - 1329698 - T 100 -8.9 -5.60993 | gap 1, opp_overlap 1329698 TTTTTTACAAAAAAA TGTACCAATCTTC-ATTGTTAGCT CTT AACTAACTTTTGAAAATTGGTACA TTTTTATTTATATAA TERM 1359 1329698 - 1329747 + T 81 -4.5 -5.42975 | gap 1, opp_overlap 1329698 TTTTTTACAAAAAAA TGTACCAATCTTC-ATTGTTAGCT CTT AACTAACTTTTGAAAATTGGTACA TTTTTATTTATATAA amyA 1331578 - 1329755 - | Alpha-amylase glgP 1333982 - 1331559 - | glycogen phosphorylase glgA 1335441 - 1334011 - | glycogen synthase glgC 1336613 - 1335441 - | glucose-1-phosphate adenylyltransferase regulatory subunit glgC 1337745 - 1336603 - | glucose-1-phosphate adenylyltransferase TERM 1360 1337277 - 1337315 + g 77 -6 -4.69415 | opp_overlap 1337285 1337289, overlap 1337279 1337306 GTGATGCTTCATCCC AAGGAACATCAATAACAG CAA CTGTTAATGAAGCTCCTG TTTCTTTATGTTGGT TERM 1361 1337279 - 1337313 + g 82 -8.6 -3.94393 | opp_overlap 1337285 1337289, overlap 1337277 1337306 GATGCTTCATCCCAA GGAACATCAATAACAG CAA CTGTTAATGAAGCTCC TGTTTCTTTATGTTG glgB 1339796 - 1337847 - | glycogen branching enzyme TERM 1362 1339990 - 1339967 - R 100 -11.2 -5.27477 | opp_overlap 1339964 1339960 1339967 ATTCCAATGAAAAAA GAGAGAAAAA CTAT TTTTTCTCTC TAAATTTCTCTTAGT TERM 1363 1339967 - 1339990 + r 82 -11.2 -2.76629 | opp_overlap 1339967, overlap 1339964 1339960 ATTCCAATGAAAAAA GAGAGAAAAA CTAT TTTTTCTCTC TAAATTTCTCTTAGT LSL_1295 1341764 - 1340001 - | neopullulanase / cyclomaltodextrinase / maltogenic alpha-amylase LSL_1296 1342847 - 1341804 - | hypothetical protein TERM 1364 1342970 - 1342948 - R 100 -8.5 -5.59357 | opp_overlap 1342947 1342948 ATTATACTAAAAAAA GCCATTAGG AAAAA CCTAATAGC ATCTTAAATTATTTA gdhA 1344332 - 1342998 - | glutamate dehydrogenase TERM 1365 1344504 - 1344476 - R 100 -9.7 -5.4833 | opp_overlap 1344476 TTATTTAATAAAAAA TATCGACAAGCCT TAA AAACTCGTCGATA TTAATAATTATTGAT LSL_1298 1345892 - 1344519 - | succinate-semialdehyde dehydrogenase [NADP+] TERM 1366 1345953 - 1345965 + r 74 -4.1 -5.26119 | opp_overlap 1345953 TATTATAAAAAATAA GCAAG TAT TTTGC TTTTATTTTTCACAA wecD 1346553 - 1346071 - | acetyltransferase LSL_1300 1346885 - 1346571 - | hypothetical protein TERM 1367 1346995 - 1346958 - R 100 -12.1 -4.39287 | TCAACCATAGCAAAA GGAGCTGAGATATAGCC GAAT GACTTTATCCCAACTCC TTGGCATAAGAGAGA TERM 1368 1347484 - 1347505 + r 100 -6.7 -6.55664 | opp_overlap 1347484 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTTTTGTTTTA LSL_1301 1348807 - 1347518 - | ISL3 family transposase TERM 1369 1348194 - 1348204 + g 74 -5.4 -4.71584 | opp_overlap 1348194 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 1370 1348544 - 1348555 + g 70 -4.4 -4.77165 | opp_overlap 1348544 1348550, overlap 1348549 1348550 CTTGCATTCAGGACA CAGA TACT TCTG TTTTCTTATAGAAAG TERM 1371 1348722 - 1348742 + g 81 -9.9 -3.38522 | overlap 1348721 1348726 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA TERM 1372 1348946 - 1348985 + r 82 -10.9 -2.57496 | opp_overlap 1348938 1348946, overlap 1348938 1348935 1348945 1348944 TATACAACCATAAAA TGGTAGTTTCTAATCAG CATAAA CTGTTCAGAAACTACCA CATTTGTTATTGTCC TERM 1373 1348985 - 1348946 - R 100 -13.8 -4.60073 | opp_overlap 1348938 1348935 1348946 1348945 1348944, overlap 1348938 TATACAACCATAAAA TGGTAGTTTCTAATCAGC ATAA ACTGTTCAGAAACTACCA CATTTGTTATTGTCC mgtE 1350359 - 1348992 - | Mg2+ transporter rluD 1351264 - 1350377 - | ribosomal large subunit pseudouridine synthase D ppnK 1352060 - 1351254 - | inorganic polyphosphate/ATP-NAD kinase LSL_1305 1352725 - 1352081 - | GTP pyrophosphokinase topB 1354901 - 1352826 - | DNA topoisomerase III wecD 1354976 - 1355512 + | acetyltransferase TERM 1374 1355512 - 1355552 + T 100 -8.5 -5.41941 | opp_overlap 1355507 1355518, overlap 1355513 1355518 TGATGATAAGCCATG AAAAAATTCACGAAATGTT TTT AACATCTCGTGAATTTTGC TTTTTATTTAGTTTC TERM 1375 1355513 - 1355551 + T 100 -12 -3.82724 | opp_overlap 1355507 1355518, overlap 1355512 1355518 GATGATAAGCCATGA AAAAATTCACGAAATGTT TTT AACATCTCGTGAATTTTG CTTTTTATTTAGTTT TERM 1376 1355518 - 1355546 + T 100 -11.9 -4.88326 | opp_overlap 1355507 1355518, overlap 1355513 1355512 TAAGCCATGAAAAAA TTCACGAAATGTT TTT AACATCTCGTGAA TTTTGCTTTTTATTT TERM 1377 1355546 - 1355518 - T 100 -14.1 -5.18357 | opp_overlap 1355518 1355513 1355512, overlap 1355507 TAAGCCATGAAAAAA TTCACGAAATGTT TTT AACATCTCGTGAA TTTTGCTTTTTATTT LSL_1308 1356890 - 1355556 - | xanthine permease xpt 1357471 - 1356893 - | xanthine phosphoribosyltransferase TERM 1378 1357526 - 1357502 - R 95 -8.7 -5.12916 | CATAAAATAATAAAA GCTCTTTTACC ATA AGTAAAAAAGC CCATACTAAAATATA LSL_1310 1358336 - 1357680 - | muramidase LSL_1311 1358965 - 1358369 - | hypothetical protein TERM 1379 1359044 - 1359084 + r 100 -13.7 -4.25389 | opp_overlap 1359044 ATTATAAAAATAAAA CTAATCATATTATGAAAGT CTA ATTGTCATAATATGATTAG TTTCTCTCTTATGCT TERM 1380 1359084 - 1359044 - R 100 -11.5 -5.3658 | opp_overlap 1359044 ATTATAAAAATAAAA CTAATCATATTATGAAAGT CTA ATTGTCATAATATGATTAG TTTCTCTCTTATGCT LSL_1312 1360075 - 1359107 - | malate permease LSL_1313 1361744 - 1360119 - | malate dehydrogenase TERM 1381 1361945 - 1361935 - g 76 -2.6 -5.46657 | TAGTTGAAGAAAAAA TTTT TTC AAAA GTTGCGGAATTTTTT LSL_1314 1361886 - 1362767 + | LysR family malolactic regulator TERM 1382 1362758 - 1362813 + T 100 -10.8 -4.59982 | opp_overlap 1362765, overlap 1362765 TTCTTTATTAACAGA TAAAAAATAGTCTAGAATCATCGATT TTGG AATCTTTGATTCTAGACTATTAATTA TTTATTTACTTATGA TERM 1383 1362765 - 1362806 + T 100 -13.3 -3.71389 | opp_overlap 1362765, overlap 1362758 TTAACAGATAAAAAA TAGTCTAGAATCATCGATT TTGG AATCTTTGATTCTAGACTA TTAATTATTTATTTA TERM 1384 1362806 - 1362765 - T 100 -13.3 -5.47431 | opp_overlap 1362765 1362758 TTAACAGATAAAAAA TAGTCTAGAATCATCGATT TTGG AATCTTTGATTCTAGACTA TTAATTATTTATTTA LSL_1315 1363267 - 1362833 - | MarR family transcriptional regulator TERM 1385 1363537 - 1363595 + r 100 -13 -2.97146 | gap 1, opp_overlap 1363540 1363545, overlap 1363539 1363540 1363545 ATTTTTATAAAATCA TAA-TAAAAGCACTAACTATCAACACT TAATTT AGTATTGATAGCTAGTGCTTTTACTTA ATTATTTACAATGTT TERM 1386 1363539 - 1363592 + r 100 -12.8 -3.62054 | opp_overlap 1363540 1363545, overlap 1363537 1363540 1363545 TTTTATAAAATCATA ATAAAAGCACTAACTATCAACACT TAATTT AGTATTGATAGCTAGTGCTTTTAC TTAATTATTTACAAT TERM 1387 1363540 - 1363591 + r 100 -16.3 -2.76509 | opp_overlap 1363540 1363545, overlap 1363539 1363537 1363545 TTTATAAAATCATAA TAAAAGCACTAACTATCAACACT TAATTT AGTATTGATAGCTAGTGCTTTTA CTTAATTATTTACAA TERM 1388 1363591 - 1363540 - R 100 -20.7 -3.72405 | opp_overlap 1363540 1363539 1363537 1363545, overlap 1363545 TTTATAAAATCATAA TAAAAGCACTAACTATCAACACT TAATTT AGTATTGATAGCTAGTGCTTTTA CTTAATTATTTACAA TERM 1389 1363586 - 1363545 - R 100 -16.2 -4.88258 | opp_overlap 1363540 1363539 1363537 1363545, overlap 1363540 AAAATCATAATAAAA GCACTAACTATCAACACT TAATTT AGTATTGATAGCTAGTGC TTTTACTTAATTATT TERM 1390 1363545 - 1363586 + r 100 -11.8 -4.52101 | opp_overlap 1363545 1363540, overlap 1363540 1363539 1363537 AAAATCATAATAAAA GCACTAACTATCAACACT TAATTT AGTATTGATAGCTAGTGC TTTTACTTAATTATT LSL_1316 1364142 - 1363609 - | TetR family transcriptional regulator LSL_1317 1364614 - 1364171 - | universal stress protein LSL_1318 1365184 - 1364738 - | CopAB ATPases metal-fist type repressor TERM 1391 1365298 - 1365273 - H 85 -4.8 -5.63504 | opp_overlap 1365273 1365271 AATTGCACAAAAAAA GATCAATAAC TTTTAC GATATTGATC TCTTTTGCTAGTCAA TERM 1392 1365646 - 1365668 + H 70 -8.4 -3.05596 | overlap 1365648 CACCTACGGTTACTT GACTGCCATC TGG GAAGGTAGTC TTAACTACACCAGTA TERM 1393 1369415 - 1369431 + G 73 -8.1 -3.57263 | overlap 1369407 CCGTTGTTCCTGTTA TACAGAA TAT TTCTGTA TTTGCAGATACAACT TERM 1394 1370016 - 1370006 - g 74 -5.4 -4.65263 | ATGTTTCAAAACAAA TTGC TCA GCAA AAACAAGATGATTCT LSL_1321 1369336 - 1370541 + | hypothetical protein TERM 1395 1370646 - 1370674 + G 82 -5.3 -5.22039 | opp_overlap 1370655 ATTTTTCCCCCTATT CCATCAGAAGTTA TTT TAACCTTTGCTGG TTTTTTGACTTTAAA LSL_1322 1370553 - 1371161 + | alkaline phosphatase TERM 1396 1371207 - 1371159 - T 89 -9.1 -4.42851 | opp_overlap 1371161 1371164, overlap 1371162 1371164 TTAAGAAAGGCAAAA TAATATAGGATTGAGATTTTGAA AAA TTCATAATCTCAATCCTATTGTT TTATATAATTAAATT TERM 1397 1371161 - 1371205 + T 100 -11.7 -4.614 | opp_overlap 1371159 1371162 1371164, overlap 1371164 AAGAAAGGCAAAATA ATATAGGATTGAGATTTTGAA AAA TTCATAATCTCAATCCTATTG TTTTATATAATTAAA TERM 1398 1371204 - 1371162 - T 100 -15.2 -4.30043 | opp_overlap 1371161 1371164, overlap 1371159 1371164 AGAAAGGCAAAATAA TATAGGATTGAGATTTTGAA AAA TTCATAATCTCAATCCTATT GTTTTATATAATTAA TERM 1399 1371164 - 1371202 + T 100 -17.8 -4.40652 | opp_overlap 1371164 1371162 1371159, overlap 1371161 AAAGGCAAAATAATA TAGGATTGAGATTTTGAA AAA TTCATAATCTCAATCCTA TTGTTTTATATAATT TERM 1400 1371202 - 1371164 - T 100 -17.8 -3.73132 | opp_overlap 1371161 1371164, overlap 1371162 1371159 AAAGGCAAAATAATA TAGGATTGAGATTTTGAA AAA TTCATAATCTCAATCCTA TTGTTTTATATAATT ackA 1372422 - 1371226 - | acetate kinase TERM 1401 1371400 - 1371418 + g 72 -6 -4.4009 | TTCATTCATTATTGC TTCTCGAG TTT CTGGAGAA TTTTCTCCAATACCA TERM 1402 1371705 - 1371687 - G 71 -5.2 -4.49958 | opp_overlap 1371687 ATGCTACTAAAGAAA CGTCCACG TCA CCTGAACG TGTTGCCATTTGAAT wecD 1373073 - 1372504 - | acetyltransferase LSL_1325 1374600 - 1373179 - | 2-oxoglutarate/malate translocator TERM 1403 1374662 - 1374684 + r 72 -4.9 -4.84246 | opp_overlap 1374651 1374662 AAATCCTTAGAAAAA GGTTGAG ATTTTATTG CTCAACC TTTATTTGTTATTTT TERM 1404 1374684 - 1374662 - R 72 -4.9 -4.86033 | opp_overlap 1374662, overlap 1374651 AAATCCTTAGAAAAA GGTTGAG ATTTTATTG CTCAACC TTTATTTGTTATTTT frdA 1376078 - 1374693 - | fumarate reductase flavoprotein subunit fumC 1377480 - 1376098 - | fumarate hydratase LSL_1328 1377774 - 1378067 + | hypothetical protein TERM 1405 1378075 - 1378110 + T 100 -13.6 -5.64873 | opp_overlap 1378075 TCCGTTAGTCAAAAA GTCCTACTTTAATC TTATGGCT GATTAAAGTAGGAC TTTTTTGTTATTCAA TERM 1406 1378110 - 1378075 - T 100 -13.6 -4.65895 | opp_overlap 1378075 TCCGTTAGTCAAAAA GTCCTACTTTAATC TTATGGCT GATTAAAGTAGGAC TTTTTTGTTATTCAA LSL_1329 1379460 - 1378126 - | pyridine nucleotide-disulphide oxidoreductase family protein TERM 1407 1379598 - 1379547 - R 83 -10.6 -3.11687 | opp_overlap 1379555, overlap 1379555 GTAAGTATTATGCAA CAAAAAAATGACAAATCATGTTCT TTTA AAAACACAATTTGTCATTTCCTTA CTTATTATTGATTAA TERM 1408 1379590 - 1379555 - R 100 -10 -5.8187 | opp_overlap 1379555, overlap 1379547 TATGCAACAAAAAAA TGACAAATCATGTTCT TTTA AAAACACAATTTGTCA TTTCCTTACTTATTA arsC 1380015 - 1379617 - | arsenate reductase nrdG 1380923 - 1380243 - | anaerobic ribonucleoside-triphosphate reductase activating protein nrdD 1383090 - 1380913 - | anaerobic ribonucleoside triphosphate reductase TERM 1409 1381797 - 1381811 + g 70 -7.2 -3.75105 | GATTTTTATCTCCAT TAGCTT TTA AAGCTA TTCTTGGTAAATTAA LSL_1333 1383272 - 1383829 + | hypothetical protein TERM 1410 1383830 - 1383875 + T 89 -9.1 -4.44915 | opp_overlap 1383835, overlap 1383833 1383834 1383835 1383837 1383870 GATCCATTTAATTAA TATAACAGCGTCAAACTAGAT TTTT ATCAAGTTTGACGCTGCGTTA TTTTATCGCTCATTA TERM 1411 1383833 - 1383872 + T 100 -10.8 -4.33182 | opp_overlap 1383835, overlap 1383830 1383834 1383835 1383837 1383870 CCATTTAATTAATAT AACAGCGTCAAACTAGAT TTTT ATCAAGTTTGACGCTGCG TTATTTTATCGCTCA TERM 1412 1383834 - 1383871 + T 100 -14.3 -3.19186 | opp_overlap 1383835, overlap 1383833 1383830 1383835 1383837 1383870 CATTTAATTAATATA ACAGCGTCAAACTAGAT TTTT ATCAAGTTTGACGCTGC GTTATTTTATCGCTC TERM 1413 1383870 - 1383835 - T 100 -17.8 -3.7645 | opp_overlap 1383834 1383833 1383830 1383835 1383837 ATTTAATTAATATAA CAGCGTCAAACTAGAT TTTT ATCAAGTTTGACGCTG CGTTATTTTATCGCT TERM 1414 1383835 - 1383870 + T 100 -17.8 -2.50789 | opp_overlap 1383835, overlap 1383834 1383833 1383830 1383837 ATTTAATTAATATAA CAGCGTCAAACTAGAT TTTT ATCAAGTTTGACGCTG CGTTATTTTATCGCT TERM 1415 1383837 - 1383868 + T 100 -14.6 -2.78052 | opp_overlap 1383835, overlap 1383835 1383834 1383833 1383830 TTAATTAATATAACA GCGTCAAACTAGAT TTTT ATCAAGTTTGACGC TGCGTTATTTTATCG TERM 1416 1384136 - 1384099 - T 74 -7.9 -3.84451 | opp_overlap 1384094, overlap 1384094 1384104 TTTTCTAAATTTAAA TAAAAGATCTACCGGAT AATT ACCTGATAGATCTTTCA TTAAATTTATGCTGA TERM 1417 1384131 - 1384104 - T 76 -5.6 -4.96468 | opp_overlap 1384094, overlap 1384099 1384094 TAAATTTAAATAAAA GATCTACCGGAT AATT ACCTGATAGATC TTTCATTAAATTTAT wecD 1385021 - 1384398 - | acetyltransferase TERM 1418 1384435 - 1384463 + g 72 -8.3 -3.42503 | overlap 1384426 ATTTTCTTTTCCTTT GTTGGAAAATTAG TAT CAAATTTTTCAAC TTCTGCATCTTCAAC mbp3 1387570 - 1385213 - | mucus binding protein TERM 1419 1386915 - 1386937 + g 70 -7 -3.74347 | GGTGATTTTGCCCCT GGGATTGGTG GAA CATCAATCGC TTTAAAGTTTATCAG TERM 1420 1387403 - 1387415 + g 77 -4.9 -5.0538 | TTTTTCTTCAACTTT TGAAA CGC TTTCA TTTTTTGGAATAAAA TERM 1421 1387846 - 1387824 - R 100 -7 -5.74122 | opp_overlap 1387824 TATTACATAAAAAAA GGTCCTGATT AAA AAACAGAACC TCTCTTAGCAATTGC wecD 1388315 - 1387947 - | acetyltransferase LSL_1337 1388554 - 1388411 - | hypothetical protein LSL_1338 1389254 - 1388643 - | DNA-binding protein TERM 1422 1388688 - 1388698 + g 82 -5.4 -5.3798 | opp_overlap 1388686 1388688 CTTTTTACCACAATA TGGA CAT TCCA TTTTTCTTGTTGTTC TERM 1423 1389353 - 1389341 - R 88 -6.3 -5.44721 | ATTATTTCAAAAAAA CAACT AAT AGTTG AGTCAAAAAATAAAA TERM 1424 1389509 - 1389482 - R 95 -9.3 -5.18726 | opp_overlap 1389482 CCTCTATAATAAAAA GATCTACCAGA AAACTA TCTGATAGATC TTTCAATATTATTGG TERM 1425 1389482 - 1389509 + r 72 -7.1 -3.81258 | opp_overlap 1389482 CCTCTATAATAAAAA GATCTACCAGA AAACTA TCTGATAGATC TTTCAATATTATTGG TERM 1426 1389574 - 1389595 + r 100 -6.7 -5.80951 | opp_overlap 1389574 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTGTTTTAAGT LSL_1339 1390894 - 1389800 - | ISL3 family transposase TERM 1427 1390281 - 1390291 + g 74 -5.4 -4.71584 | opp_overlap 1390281 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 1428 1390809 - 1390829 + g 81 -9.9 -3.38522 | overlap 1390808 1390813 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA TERM 1429 1391016 - 1390975 - R 84 -6.1 -5.19275 | gap 1, opp_overlap 1390987, overlap 1390978 ATGGAGAAAATAAAA GAAGGACCG-TAATGTAAAA AAA TTTTACATTATCAGTCCTAA ATATTATACAACCAG TERM 1430 1391013 - 1390978 - R 100 -12.2 -4.66746 | gap 1, opp_overlap 1390987, overlap 1390975 GAGAAAATAAAAGAA GGACCG-TAATGTAAAA AAA TTTTACATTATCAGTCC TAAATATTATACAAC TERM 1431 1391200 - 1391155 - R 100 -9.2 -5.38951 | opp_overlap 1391155, overlap 1391196 AACTCATAGAAAAAA TCACCATCTTTGAACACTAC TCCCTT GTAGAGTTTAAAAACGGTGA TTCAATAAAAATTAA TERM 1432 1391239 - 1391273 + r 76 -7.2 -4.32067 | opp_overlap 1391196, overlap 1391242 TAAATTTTACCACAT CACCCCTAGTAGTAGT TTA GCTATTATTGGGGTTG TTATTTTGTACAATC TERM 1433 1391242 - 1391270 + r 80 -7.5 -4.26938 | overlap 1391239 ATTTTACCACATCAC CCCTAGTAGTAGT TTA GCTATTATTGGGG TTGTTATTTTGTACA LSL_1340 1392290 - 1391274 - | hypothetical protein trmA 1393908 - 1392529 - | tRNA (Uracil-5-) -methyltransferase TERM 1434 1393365 - 1393380 + g 72 -6.2 -4.41241 | TAATCTTGCTCATAC GTAAGA TATC TCTTAC TTTTATCAAGATTTC TERM 1435 1394163 - 1394143 - g 81 -9.9 -3.38522 | overlap 1394141 1394147 TATTGACCCTAAATA TCAATATAC TTC GTATATTGA AGAAAAAATTATTAA TERM 1436 1394341 - 1394330 - g 70 -4.4 -4.77165 | opp_overlap 1394309 1394330, overlap 1394309 1394308 CTTTCTATAAGAAAA CAGA AGTA TCTG TGTCCTGAATGCAAG TERM 1437 1394691 - 1394681 - g 74 -5.4 -4.71584 | opp_overlap 1394681 GAAAGAAATAATAAA TTCC TTA GGAA TTATTTCATTCAATA LSL_1342 1394078 - 1395367 + | ISL3 family transposase TERM 1438 1395401 - 1395380 - T 100 -6.7 -6.55664 | opp_overlap 1395380 TAAAACAAAAAAAAA CTATTAGAC TTTC ATCTAATAG TTTGAAAATAATAAT LSL_1343 1396523 - 1395504 - | putative lipid kinase gatB 1397989 - 1396556 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1439 1397419 - 1397433 + g 70 -4.3 -4.70659 | TAACGTCAGCACGCA TGGAA CCTTC TTCCA TTTTTACGTCTGAAA gatA 1399452 - 1397989 - | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A gatC 1399754 - 1399455 - | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C TERM 1440 1399891 - 1399868 - R 82 -6.1 -4.98672 | TTTAAAAATATAAAA GAGACTACT GCAAAA AATAGTCTC ACTTTATATATTAAT LSL_1347 1401051 - 1399906 - | lipoprotein, pheromone precursor lig 1403066 - 1401048 - | NAD-dependent DNA ligase pcrA 1405317 - 1403083 - | ATP-dependent DNA helicase TERM 1441 1405415 - 1405386 - R 72 -5.1 -4.81685 | ATTAATCACTAAAAA GAGCGATAACT TTATAATT ATTTATCGCTC CATTAACTATTATTC purK 1406564 - 1405425 - | phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit TERM 1442 1405735 - 1405759 + g 80 -6.5 -4.65895 | opp_overlap 1405757 TCAAAGACGTAGCCA GAATTGTGTAA AGC TGGCACAATTC TTTTTACATACAAAG TERM 1443 1406851 - 1406822 - R 100 -8.8 -5.95539 | opp_overlap 1406822 TTTGAAATAAAAAAA CGTTATTCAACA AACTAA TGTTAAATAACG TTAATTATCATAAAT TERM 1444 1409935 - 1409954 + r 82 -9.4 -3.66803 | opp_overlap 1409934 1409933 TTCAGTCCTACAACC CTAAGAAG CGAG CTTCTTAG TTTGGGCTCTTCCCG TERM 1445 1410387 - 1410363 - R 95 -8.7 -5.00196 | overlap 1410365 TTTCAAAGAACAAAA TCTTGAGAGAT ATG ACCTCTCAAAA CTAAACAAAGTATCC TERM 1446 1410385 - 1410365 - R 72 -9.1 -2.74335 | overlap 1410363 TCAAAGAACAAAATC TTGAGAGAT ATG ACCTCTCAA AACTAAACAAAGTAT TERM 1447 1410451 - 1410470 + r 72 -9.2 -2.65808 | opp_overlap 1410442 1410439, overlap 1410448 1410448 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 1448 1411811 - 1411769 - R 71 -7.9 -3.48689 | gap 1, opp_overlap 1411769 AAAGCGATAGCAGAA CCATCTTTCATCTAAGGATC ATGC GATCCTTAGA-GATATACGG TATTAGCACCTGTTT TERM 1449 1412076 - 1412088 + r 76 -6.3 -4.67692 | overlap 1412083 AAGCCCTGCACATTT GTTTC ATC GAAAC TTTGTTTAGTTTTCA TERM 1450 1412301 - 1412278 - R 100 -6.1 -5.91981 | opp_overlap 1412278 AAAATCTAAAAAAAA TCAGTTTGC TTATTT ACAAACTGA TTTTTTATCTTATTT TERM 1451 1412278 - 1412301 + r 87 -5.4 -5.57729 | opp_overlap 1412278 AAAATCTAAAAAAAA TCAGTTTG CTTATTTA CAAACTGA TTTTTTATCTTATTT lysS 1413808 - 1412321 - | lysyl-tRNA synthetase LSL_1352 1414894 - 1413902 - | tRNA-dihydrouridine synthase TERM 1452 1415928 - 1415898 - R 100 -8.4 -5.63517 | TTGTCAAATAAAAAA TGGTACTGACAGTT TAA AACCACCAATACCA TTTTTGTTATTCATC ftsH 1418013 - 1415935 - | cell division protein TERM 1453 1417482 - 1417498 + g 74 -9.5 -3.14132 | TGTCAATAGGCTTAG CTTTGGA TTT TCCAAAG TTCATAACACGGCCA hpt 1418693 - 1418154 - | hypoxanthine-guanine phosphoribosyltransferase TERM 1454 1418621 - 1418578 - G 81 -10 -3.39784 | gap 1, opp_overlap 1418577 1418578 1418582 1418583 1418590, overlap 1418576 1418582 GCACCCTTAAGAACA CAAACTACTAATGGATTTTTA CCT TCAAAATCC-TTAGTAATTTG CTTTCCTAGTTTTTT LSL_1355 1420068 - 1418710 - | tRNA(Ile)-lysidine synthase TilS TERM 1455 1418844 - 1418856 + g 74 -3.4 -5.28176 | AACTCTTGTTTCTCT GTTC ACTTG GAAC TTTTTTATCAATAAA TERM 1456 1418858 - 1418873 + g 89 -3.4 -5.88061 | opp_overlap 1418868, overlap 1418868 TGTTCACTTGGAACT TTTTTA TCAA TAAAAA TTTTTTTAATTTTTT TERM 1457 1420087 - 1420120 + r 82 -9.7 -3.68988 | opp_overlap 1420092, overlap 1420092 TCACTTCAAAAAAAT AAAAAGGCAAGAAGT AATT ACCTCTTGCCTTTTG TTGTATTAGCTGCGA TERM 1458 1420092 - 1420115 + r 100 -9.6 -4.90381 | opp_overlap 1420092, overlap 1420087 TCAAAAAAATAAAAA GGCAAGAAGT AATT ACCTCTTGCC TTTTGTTGTATTAGC TERM 1459 1420115 - 1420092 - R 100 -11.8 -5.86609 | opp_overlap 1420092 1420087 TCAAAAAAATAAAAA GGCAAGAAGT AATT ACCTCTTGCC TTTTGTTGTATTAGC LSL_1356 1420590 - 1420126 - | hypothetical protein LSL_1357 1421074 - 1420679 - | cell division protein DIVIC LSL_1358 1421382 - 1421113 - | heat shock protein 15 LSL_1359 1422959 - 1421382 - | polysaccharides export protein TERM 1460 1421514 - 1421499 - G 70 -4 -4.88293 | AATTCCAAAAATAAA TACTCC TACA GGAATA CATATTAATGAAATT TERM 1461 1421965 - 1421933 - G 70 -3.6 -4.95484 | overlap 1421935 TATCACCAAATAAAA GTTTATTAACTTCA GGCAA TAAAGCTAATAATC CCACTGTAGCAGCAC mfd 1426493 - 1422969 - | transcription-repair coupling factor TERM 1462 1423190 - 1423201 + g 89 -3 -5.88565 | ACTTATCTGATAACT CAAT TTCA ATTG TTTTTTTATTCTGGC pth 1427072 - 1426515 - | peptidyl-tRNA hydrolase ldh 1427321 - 1428289 + | L-lactate dehydrogenase TERM 1463 1428315 - 1428337 + T 100 -13.6 -5.55769 | opp_overlap 1428319 AATTACAAGTTTCTA GAGATTGGAT TAT ATCCAATCTC TTTTTTGTTCTAAGA TERM 1464 1428584 - 1428546 - T 91 -7.6 -5.14563 | opp_overlap 1428546 TTTTTTAGTAAAAAA TAGGTGAAGAGACCTC AAAATAA AAATTCTCTTCACCTA TTTTATTGCAAATCT LSL_1363 1430887 - 1428614 - | hypothetical protein TERM 1465 1429627 - 1429641 + g 85 -4.4 -5.67283 | CTCTATCTTCAATAT TTTTTA CAT TAAAAA TTTTTTCTTTAACTT TERM 1466 1431578 - 1431566 - g 76 -2.7 -5.42259 | GGATTCCGAAAAAAA GATAA TCT TCATC GCACCCTATTTACTT LSL_1364 1431056 - 1431694 + | hypothetical protein TERM 1467 1431741 - 1431711 - f 74 -8.5 -3.20878 | opp_overlap 1431711 TAAGATTTAATTTAA GTATTAAGTTGTC TACTG GATAACTTAATAC TTTTTTAATTTTTGT TERM 1468 1431711 - 1431741 + F 100 -11.4 -5.56112 | opp_overlap 1431711 TAAGATTTAATTTAA GTATTAAGTTGTCT ACT GGATAACTTAATAC TTTTTTAATTTTTGT TERM 1469 1432036 - 1432066 + F 100 -14.9 -5.54907 | overlap 1432027 TGGTATCACGCTAAG CGTCCTTTAGTCT CTACT AGACTAAAGGGCG TTTTTATTTTATAAC apbA 1432112 - 1433074 + | 2-dehydropantoate 2-reductase TERM 1470 1433091 - 1433130 + T 100 -10.2 -5.18995 | gap 1, opp_overlap 1433091 TAATAATTAAAAAAA GTGTATCTC-AATCCGATT TCA ACTCGGATAAGAGATACAC TTTTTATATTATCTT TERM 1471 1433130 - 1433091 - T 100 -10.2 -5.71638 | gap 1, opp_overlap 1433091 TAATAATTAAAAAAA GTGTATCTC-AATCCGATT TCA ACTCGGATAAGAGATACAC TTTTTATATTATCTT tyrS 1434394 - 1433144 - | tyrosyl-tRNA synthetase TERM 1472 1434456 - 1434427 - R 100 -14.5 -5.55769 | TTTGATAATAAAAAA GTCCCTAACGTTA ATAA TAACATTAGGGAC GAAAAATTATTTCCG fur 1435120 - 1434677 - | ferric uptake regulation protein LSL_1368 1435809 - 1435222 - | hypothetical protein sbcC 1438938 - 1435837 - | exonuclease sbcD 1440050 - 1438935 - | exonuclease TERM 1473 1439550 - 1439536 - G 74 -2.1 -5.55664 | overlap 1439547 1439549 CCAGCAGCAAAAAAA TGTGC AACCA ACACA TGTTTCATGTTAGGC LSL_1371 1440534 - 1441103 + | peptidoglycan binding protein TERM 1474 1441142 - 1441165 + T 100 -11.1 -5.45802 | opp_overlap 1441136 GAAATTAATTTTTAA GTCCCAATC CTCTTA GATTGGGAC TTTTTATTTTGCCAA LSL_1372 1443085 - 1441277 - | pyruvate oxidase ddpX 1443764 - 1443201 - | D-alanyl-D-alanine dipeptidase LSL_1374 1444456 - 1445517 + | ABC transporter permease protein LSL_1375 1445521 - 1446195 + | ABC transporter, ATP-binding protein TERM 1475 1446208 - 1446233 + F 82 -6.2 -4.98911 | TGATATAATATTAGG CGCAACAATT CATTTA ATTTGTTGCG TTTCTTTTTGTGGTG LSL_1376 1446294 - 1447052 + | nitro/flavin reductase TERM 1476 1447057 - 1447102 + T 100 -10 -5.63504 | gap 1, opp_overlap 1447057 TTTGGAATTAAAAAA TTCCTGAG-ACCTGATTGG CTTACATTT CCAATCAAGTACTCAGGAA TTTTTTTATAACATT TERM 1477 1447102 - 1447057 - T 100 -12.2 -5.26875 | gap 1, opp_overlap 1447057 TTTGGAATTAAAAAA TTCCTGAG-ACCTGATTGG CTTACATTT CCAATCAAGTACTCAGGAA TTTTTTTATAACATT rep 1449399 - 1447108 - | ATP-dependent DNA helicase TERM 1478 1448085 - 1448103 + g 70 -8.2 -3.16742 | opp_overlap 1448077 TCATAACGTAACTGC GAGCTAAG AAT TTTAGCTC TTGGTCACCATTAAC TERM 1479 1449600 - 1449639 + H 100 -13.9 -3.36715 | overlap 1449604 ATACGAATACAGTGT TGAAGGCTAGGATGAAT AATTTA ATTCATTCTAGCCTTTA TGTTATACTTGTATA TERM 1480 1449604 - 1449635 + H 100 -12.5 -4.30911 | overlap 1449600 GAATACAGTGTTGAA GGCTAGGATGAAT AATTTA ATTCATTCTAGCC TTTATGTTATACTTG napA 1449684 - 1451540 + | Na+/H+ antiporter TERM 1481 1451573 - 1451551 - T 77 -7.7 -4.09511 | opp_overlap 1451551 AATAGTTGTTTAAAA GGACTATGC TCAAT GCGTAGTCC TTTTTTCGTTCTCAA TERM 1482 1451551 - 1451573 + T 100 -9.9 -5.32944 | opp_overlap 1451551 AATAGTTGTTTAAAA GGACTATGC TCAAT GCGTAGTCC TTTTTTCGTTCTCAA LSL_1379 1452193 - 1451639 - | hypothetical protein TERM 1483 1452302 - 1452324 + H 80 -7.7 -4.16279 | opp_overlap 1452302 AATGCATAACAAAAA GCACATCCC AACAA GAGATGTGC TTTTCCGATAATATG TERM 1484 1452324 - 1452302 - H 100 -9.9 -5.21236 | opp_overlap 1452302 AATGCATAACAAAAA GCACATCCC AACAA GAGATGTGC TTTTCCGATAATATG TERM 1485 1452712 - 1452750 + H 82 -4.7 -5.4659 | opp_overlap 1452701 1452712 1452724, overlap 1452734 1452744 1452745 AACATACTAAGATTA GTAGTGAAGAAATCTC-CG ACG CGAGAGAGTACT-CACTAC TTTTTCTTTATGTTA TERM 1486 1453645 - 1453625 - H 95 -10.5 -4.63218 | opp_overlap 1453625 GTGCGGTCAAGAAAA CCTCTCCAA TGC TTGAAGAGG TTCGTTACTATGCTC TERM 1487 1453625 - 1453645 + H 73 -8.3 -3.43785 | opp_overlap 1453625 GTGCGGTCAAGAAAA CCTCTCCAA TGC TTGAAGAGG TTCGTTACTATGCTC TERM 1488 1454234 - 1454214 - g 81 -9.9 -3.38522 | overlap 1454212 1454218 TATTGACCCTAAATA TCAATATAC TTC GTATATTGA AGAAAAAATTATTAA TERM 1489 1454412 - 1454401 - g 70 -4.4 -4.77165 | opp_overlap 1454380 1454401, overlap 1454380 1454379 CTTTCTATAAGAAAA CAGA AGTA TCTG TGTCCTGAATGCAAG TERM 1490 1454762 - 1454752 - g 74 -5.4 -4.71584 | opp_overlap 1454752 GAAAGAAATAATAAA TTCC TTA GGAA TTATTTCATTCAATA LSL_1381 1454149 - 1455438 + | ISL3 family transposase TERM 1491 1455472 - 1455451 - T 100 -6.7 -6.55664 | opp_overlap 1455451 TAAAACAAAAAAAAA CTATTAGAC TTTC ATCTAATAG TTTGAAAATAATAAT TERM 1492 1455788 - 1455756 - T 74 -5.7 -4.67168 | opp_overlap 1455756 1455754 AAAAAGTGTTAAAAA TAAGACAGTAACC TCAGAAT AGATACTGTCTTA TCTCTTTTTTTACTT TERM 1493 1455878 - 1455849 - T 95 -8.7 -5.10077 | opp_overlap 1455850 1455854, overlap 1455850 AAAGAGCCTAAAAAA GTAAACCAGTCTC ATAC GAAACTGGTTTAT GATATATCCTTATTA TERM 1494 1455877 - 1455850 - T 95 -12.2 -3.6442 | opp_overlap 1455850 1455854, overlap 1455849 AAGAGCCTAAAAAAG TAAACCAGTCTC ATAC GAAACTGGTTTA TGATATATCCTTATT TERM 1495 1455850 - 1455877 + T 77 -10 -2.74182 | opp_overlap 1455849 1455850, overlap 1455854 AAGAGCCTAAAAAAG TAAACCAGTCTC ATAC GAAACTGGTTTA TGATATATCCTTATT TERM 1496 1455979 - 1455995 + T 71 -5.2 -4.65838 | opp_overlap 1455979 TTTTTCACTATAAAT GAGATT AAATA AATCTC TTTTTAAGCTGTCTA LSL_1382 1456711 - 1455983 - | hypothetical protein LSL_1383 1457448 - 1456708 - | ABC transporter LSL_1384 1458356 - 1457448 - | ABC transporter, ATP-binding protein TERM 1497 1457590 - 1457600 + g 79 -4 -5.58179 | overlap 1457584 1457582 TCTTTATTGTTATCG TTGA TAA TCAA TTTTTTGTTATCATC LSL_1385 1458528 - 1458731 + | response regulator receiver TERM 1498 1458746 - 1458767 + T 100 -6.7 -6.55664 | opp_overlap 1458746 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTTTTGTTTTA LSL_1386 1460069 - 1458780 - | ISL3 family transposase TERM 1499 1459456 - 1459466 + g 74 -5.4 -4.71584 | opp_overlap 1459456 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 1500 1459806 - 1459817 + g 70 -4.4 -4.77165 | opp_overlap 1459806 1459812, overlap 1459811 1459812 CTTGCATTCAGGACA CAGA TACT TCTG TTTTCTTATAGAAAG TERM 1501 1459984 - 1460004 + g 81 -9.9 -3.38522 | overlap 1459983 1459988 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA LSL_1387 1460877 - 1460314 - | hypothetical protein TERM 1502 1461030 - 1461017 - R 71 -5.3 -4.67048 | GTAGTGTAAAATAAA TTGTG TAAA CACAA AAAGGAATAAATCCG TERM 1503 1461088 - 1461034 - R 80 -5.3 -5.19879 | gap 1, opp_overlap 1461032 GTGTAAACACAAAAA GGAATAAATC-CGTTATAGTAGAGTT GCGA AACATTACTAGAAAGAGATTTATTCC TATGACTTAGTTTAC TERM 1504 1461199 - 1461185 - R 71 -8.6 -2.79842 | opp_overlap 1461185 1461184 1461195 AACAGCTATGAATGA TCTGCT TCA AGCAGA ATTGTCGGCCTTTTT TERM 1505 1461345 - 1461319 - R 91 -8.1 -5.0916 | opp_overlap 1461319 GGGTGAACAGAAAAA GCATCCCGTAT TTTTG ATACGAAATGC TTTCAATAAGTGTAA doc 1462020 - 1461649 - | death on curing protein LSL_1389 1462274 - 1462017 - | hypothetical protein TERM 1506 1462349 - 1462328 - R 83 -6 -5.17786 | opp_overlap 1462332 CAACAAAAGCAAAAA TATAGGAT GGATTT ATCCTATA TCAAGTGAAATAACT TERM 1507 1462675 - 1462662 - R 73 -8.1 -3.39803 | overlap 1462671 CAGCCACATTTATAA GCGAC TAAA GTCGC AACAACTGTGTCAAT TERM 1508 1462737 - 1462724 - R 70 -4.5 -4.75967 | opp_overlap 1462724 AAGTACAAAAAATAA CACCC CGAA AGGTG CTCTTTGTAAGTATA LSL_1390 1463855 - 1463295 - | hypothetical protein LSL_1391 1465186 - 1464041 - | hypothetical protein LSL_1392 1465660 - 1465187 - | hypothetical protein LSL_1393 1466138 - 1465644 - | hypothetical protein LSL_1394 1466624 - 1466196 - | hypothetical protein LSL_1395 1466893 - 1466726 - | hypothetical protein LSL_1396 1467079 - 1466969 - | hypothetical protein LSL_1397 1469218 - 1468364 - | dehydrogenase TERM 1509 1469199 - 1469209 + g 79 -4 -5.46129 | CCACTATTGCCGCCC GTAA TAA TTAC TTTTTTCATTTCTTA LSL_1398 1469799 - 1469230 - | ribonuclease M5 LSL_1399 1470062 - 1469814 - | hypothetical protein TERM 1510 1470331 - 1470321 - R 74 -5.4 -4.77165 | CTCCTGAGAAGAAAA TGGT CAT ACCA AGCTCGACAAACTTC TERM 1511 1471047 - 1471020 - R 75 -8.4 -3.6003 | opp_overlap 1471020, overlap 1471026 CAAAGGACTTTTAAA GGTAAAGCCGTG ACGC CACAGCACTACC TTGGTCACGCTATAA LSL_1400 1471232 - 1471089 - | hypothetical protein LSL_1401 1471695 - 1471249 - | hypothetical protein TERM 1512 1472017 - 1472007 - R 81 -4 -5.54894 | opp_overlap 1472007 AATTTATTAAAAAAA TTCT AGC AGAA ATCATCTATTAGAAT TERM 1513 1474062 - 1474088 + r 78 -6.6 -4.37502 | overlap 1474061 CACCTTTACCATTGT CCACTACAGTTA CTG TAGCTGTGATGG TTTTAGTATAGTACT TERM 1514 1475970 - 1475990 + r 71 -6.9 -3.98627 | TTTGCTTACCTTCAA CCTTTTCAT TAA ATGTAAAGG TTATTGTCTTCGTAG TERM 1515 1476642 - 1476615 - R 100 -13 -2.8194 | opp_overlap 1476615, overlap 1476606 TAATTACTGATTATA GTCTAGTAATTT GCAT AAATTACTAGAC TAGCTTCCACGTGGA TERM 1516 1476615 - 1476642 + r 95 -13 -2.53263 | opp_overlap 1476615 1476606 TAATTACTGATTATA GTCTAGTAATTT GCAT AAATTACTAGAC TAGCTTCCACGTGGA TERM 1517 1477523 - 1477507 - R 83 -9.5 -3.91858 | GAGAGATCCCATAAA TAAACCG TCT CGGTTTA TATAGGTGGCAATTT TERM 1518 1477879 - 1477860 - R 84 -6.4 -5.18355 | opp_overlap 1477860 TCTAAAAATCAAAAA GAACACCC CGAA AGGTGCTC TCTGTAAGTATAGTA rpsI 1478298 - 1477906 - | 30S ribosomal protein S9 rplM 1478755 - 1478312 - | 50S ribosomal protein L13 truA 1479660 - 1478890 - | tRNA pseudouridine synthase A cbiQ 1480470 - 1479676 - | cobalt transport permease protein cbiO 1481332 - 1480463 - | cobalt transport ATP-binding protein cbiO 1482156 - 1481308 - | cobalt transport ATP-binding protein TERM 1519 1481884 - 1481900 + g 93 -3.7 -6.00086 | overlap 1481886 CTGATTATCGGGATT TTGGAAT ACC ATTCCTA TTTTTTTTCTAATAT TERM 1520 1481886 - 1481898 + g 76 -6.3 -4.6341 | overlap 1481884 GATTATCGGGATTTT GGAAT ACC ATTCC TATTTTTTTTCTAAT TERM 1521 1482271 - 1482253 - R 100 -8.9 -5.65927 | opp_overlap 1482253 TATTCAAACAAAAAA GACACTC GTAAT GAGTGTC TTTAAAATGCTAATA TERM 1522 1482253 - 1482271 + r 82 -9.6 -3.62572 | opp_overlap 1482253 TATTCAAACAAAAAA GACACTCG TAA TGAGTGTC TTTAAAATGCTAATA rplQ 1482854 - 1482471 - | 50S ribosomal protein L17P TERM 1523 1482506 - 1482518 + g 74 -9.1 -3.13432 | CAACCATCTTTGCAG CGTCG CCA CGACG TTCACTCATCTTAAG rpoA 1483832 - 1482888 - | DNA-directed RNA polymerase subunit alpha rpsK 1484303 - 1483917 - | 30S ribosomal protein S11 TERM 1524 1484030 - 1484044 + g 76 -10 -2.8154 | overlap 1484029 1484032 GAATTGCTGCTTCAC GACCAG AAC CTGGTC CTTTAACTGCTACTT rpsM 1484696 - 1484331 - | 30S ribosomal protein S13 rpmJ 1484835 - 1484722 - | 50S ribosomal protein L36P infA 1485089 - 1484871 - | protein translation initiation factor 1 TERM 1525 1485294 - 1485273 - R 100 -8.1 -5.4148 | opp_overlap 1485273 1485265 1485276 GAAATAATTAAAAAA GAATGCAAA AATA TTTGCATCC TTTTAAAATTTATTT adk 1485963 - 1485304 - | adenylate kinase / nucleoside-diphosphate kinase TERM 1526 1486015 - 1486058 + r 100 -15 -2.97158 | gap 1, opp_overlap 1486015 1486022, overlap 1486022 CTTATTTTTTTAATA TGCAAAAGGTCAGAAAGATAT AAA ATATCTCTCTGACCTTTT-CA GTTCTTATTCACGTA TERM 1527 1486058 - 1486015 - R 100 -17.2 -3.02511 | gap 1, opp_overlap 1486015 1486022, overlap 1486022 CTTATTTTTTTAATA TGCAAAAGGTCAGAAAGATAT AAA ATATCTCTCTGACCTTTT-CA GTTCTTATTCACGTA TERM 1528 1486022 - 1486052 + r 100 -14.2 -4.38637 | opp_overlap 1486015 1486022, overlap 1486015 TTTTAATATGCAAAA GGTCAGAAAGATAT AAA ATATCTCTCTGACC TTTTCAGTTCTTATT TERM 1529 1486052 - 1486022 - R 100 -16.4 -4.28254 | opp_overlap 1486022 1486015, overlap 1486015 TTTTAATATGCAAAA GGTCAGAAAGATAT AAA ATATCTCTCTGACC TTTTCAGTTCTTATT secY 1487361 - 1486063 - | preprotein translocase subunit SecY rplO 1487798 - 1487364 - | 50S ribosomal protein L15P rpmD 1488016 - 1487834 - | 50S ribosomal protein L30P rpsE 1488530 - 1488030 - | 30S ribosomal protein S5 rplR 1488908 - 1488552 - | 50S ribosomal protein L18 rplF 1489489 - 1488953 - | 50S ribosomal protein L6P TERM 1530 1489110 - 1489135 + g 73 -6.9 -3.97139 | overlap 1489113 ATAATTGAAGTTGCG GAAGGTGTTTC GAAT GTAATACCTTC TTCTTCTTCAAATTC rpsH 1489920 - 1489522 - | 30S ribosomal protein S8 rpsN 1490140 - 1489955 - | SSU ribosomal protein S14P rplE 1490695 - 1490153 - | 50S ribosomal protein L5 rplX 1491025 - 1490720 - | 50S ribosomal protein L24P rplN 1491428 - 1491060 - | 50S ribosomal protein L14P rpsQ 1491753 - 1491487 - | 30S ribosomal protein S17 rpmC 1491974 - 1491780 - | 50S ribosomal protein L29 rplP 1492398 - 1491964 - | 50S ribosomal protein L16 rpsC 1493058 - 1492402 - | 30S ribosomal protein S3 rplV 1493419 - 1493072 - | 50S ribosomal protein L22 rpsS 1493718 - 1493437 - | 30S ribosomal protein S19 rplB 1494599 - 1493766 - | 50S ribosomal protein L2 rplW 1494909 - 1494625 - | 50S ribosomal protein L23P rplD 1495532 - 1494909 - | 50S ribosomal protein L4 rplC 1496180 - 1495557 - | 50S ribosomal protein L3 rpsJ 1496532 - 1496224 - | 30S ribosomal protein S10 TERM 1531 1496491 - 1496516 + g 89 -3.3 -5.79595 | overlap 1496484 ATCTAAAATGCGATG TTCGTATGCCT TTAA ACGAATACGAA TTTTTTGTTTTGCCA TERM 1532 1496797 - 1496776 - H 79 -6.7 -4.62069 | TCTTTACTCTAAAAA CTACTATAC TATA ATATAGTAG AAATAATTTTTAGGA TERM 1533 1497167 - 1497155 - g 73 -4.1 -4.88918 | overlap 1497159 1497160 CGAGCTCAAACAAAA GAAGC TAA ACTTC AAGTTCAAATCGCAA hflX 1496822 - 1498081 + | GTP-binding protein TERM 1534 1498176 - 1498140 - T 100 -13.2 -4.89233 | opp_overlap 1498140 TATCAACAGCAAAAA CGCCAGAAATCAAGTT TTCAT AACGTGATTTCTGACG TTTTTTAATTTTGAG TERM 1535 1498140 - 1498176 + T 100 -11 -5.46698 | opp_overlap 1498140 TATCAACAGCAAAAA CGCCAGAAATCAAGTT TTCAT AACGTGATTTCTGACG TTTTTTAATTTTGAG LSL_1438 1499045 - 1498209 - | RpiR family transcriptional regulator TERM 1536 1499540 - 1499520 - g 76 -7.7 -3.96624 | TATCTCCACCAGAAA GATTAAAAG CTT CTCTTAATC CAAATGTTCAACTTT TERM 1537 1499549 - 1499567 + G 70 -3.9 -4.99056 | CTTAATCCAAATGTT CAACTTT GTTTA GAAGTTG TTTTTCCTTCTGTTG TERM 1538 1499825 - 1499812 - g 70 -3.9 -4.87273 | AACACTTGATAAAAA CAATA ATCC TATTG AAATAAAGAAAGGTG rpiA 1499177 - 1499854 + | ribose 5-phosphate isomerase TERM 1539 1500106 - 1500096 - g 71 -5.4 -4.64048 | GACTATATAAAGAAA GCAT TAA ATGC AGGAAAACATGTCTT LSL_1440 1499847 - 1500824 + | NAD-dependent oxidoreductase TERM 1540 1500870 - 1500832 - T 100 -10.5 -5.34857 | opp_overlap 1500832 CTAAATAAAATAAAA TCGGATGATGAATCAAA TTTAT CTTGATCCATTATCCGA TTTATTTATTAGGAG TERM 1541 1500832 - 1500870 + T 93 -9.8 -4.67607 | opp_overlap 1500832 CTAAATAAAATAAAA TCGGATGATGAATCAA ATTTATC TTGATCCATTATCCGA TTTATTTATTAGGAG LSL_1441 1501271 - 1500879 - | hypothetical protein LSL_1442 1501521 - 1502840 + | amino acid permease TERM 1542 1502877 - 1502854 - T 100 -9 -5.63504 | gap 1, opp_overlap 1502854 AATTTCACAAAAAAA GTACGGCA-AT TCA ATCTGCCGTAC TTTTTATCTCTAACC TERM 1543 1502854 - 1502877 + T 95 -9 -5.03994 | gap 1, opp_overlap 1502854 AATTTCACAAAAAAA GTACGGCA-AT TCA ATCTGCCGTAC TTTTTATCTCTAACC glnP 1503540 - 1502887 - | glutamine transport system permease protein glnM 1504199 - 1503561 - | glutamine transport system permease protein glnH 1505026 - 1504196 - | glutamine-binding protein TERM 1544 1504713 - 1504724 + g 71 -3 -5.03715 | opp_overlap 1504713 GCAGCAATTACAGCA TCAA TATT TTGA TTTTTTAAGAGTGGT glnQ 1505779 - 1505042 - | glutamine transport ATP-binding protein TERM 1545 1505950 - 1505992 + r 100 -19.6 -3.73904 | opp_overlap 1505952, overlap 1505944 1505952 TTACATGGATATAAA AACACCATATAATTGTTAGA AAA TCTAACAATTATATGGTGTC TTCTTAAATATCTTT TERM 1546 1505952 - 1505990 + r 100 -22.2 -3.43848 | opp_overlap 1505952, overlap 1505950 1505944 ACATGGATATAAAAA CACCATATAATTGTTAGA AAA TCTAACAATTATATGGTG TCTTCTTAAATATCT TERM 1547 1505990 - 1505952 - R 100 -22.2 -4.99638 | opp_overlap 1505952 1505950 1505944 ACATGGATATAAAAA CACCATATAATTGTTAGA AAA TCTAACAATTATATGGTG TCTTCTTAAATATCT LSL_1447 1506436 - 1505996 - | hypothetical protein TERM 1548 1506436 - 1506421 - G 77 -5.4 -4.88918 | CCATCCCAAATAAAA GTGCAA TGGA CTGCAC AAAAATTAAACTCCG TERM 1549 1506574 - 1506541 - R 100 -12.7 -5.24129 | opp_overlap 1506551 CCCCCTTATAAAAAA TACCTTGTAAGTAAC TTTT ACTACTTACAAGGTA TCACATCTTACCTTC LSL_1448 1507499 - 1506582 - | hypothetical protein TERM 1550 1506620 - 1506634 + g 73 -7.2 -4.0274 | TGCTTAAATGTTCAT CTTCAA TAC TTGAAG TTCTTTCGTAGTAAG TERM 1551 1507348 - 1507337 - G 82 -4.4 -5.46706 | ATGCTAAAATAAAAA GAAG CCCT CTTC CGATAAAGCCATTCG LSL_1449 1507994 - 1507515 - | hypothetical protein TERM 1552 1507977 - 1507993 + g 73 -3.7 -5.15167 | TGGTGTGATAAACGG TGGTGTA CGA TATGCCA TTTTTCTTCCTCCTA fur 1508524 - 1508093 - | ferric uptake regulation protein TERM 1553 1509413 - 1509427 + G 76 -4.2 -5.03713 | TCAAAGGTGTCTTCA CTGGTG CCT CAACAG TTTTCTTTGCTTATT LSL_1451 1508743 - 1510140 + | amino acid permease TERM 1554 1510159 - 1510197 + T 91 -9.8 -4.43911 | opp_overlap 1510159 AATATAACCAAAAAA GGTACTAGCGATTAGT ATAATTA ACTAATTACTAGTACC TTTTCATTGCAATTT TERM 1555 1510197 - 1510159 - T 100 -9.8 -5.3671 | opp_overlap 1510159 AATATAACCAAAAAA GGTACTAGCGATTAGT ATAATTA ACTAATTACTAGTACC TTTTCATTGCAATTT TERM 1556 1510216 - 1510266 + T 100 -13.1 -2.77355 | gap 1, opp_overlap 1510228, overlap 1510216 1510228 TCATTGCAATTTTTC TATAATCAAAAAGGAATTACGTCA TTAT TCGCGTAATTCCTTTTTGATT-TA ATCTTCTTATTTAGA TERM 1557 1510216 - 1510267 + T 89 -11.2 -3.63464 | opp_overlap 1510228, overlap 1510216 1510228 TCATTGCAATTTTTC TATAATCAAAAAGGAATTACGTCA TTAT TCGCGTAATTCCTTTTTGATTTAA TCTTCTTATTTAGAA TERM 1558 1510228 - 1510255 + T 89 -7.8 -5.02715 | opp_overlap 1510228, overlap 1510216 1510216 TTCTATAATCAAAAA GGAATTACGTCA TTAT TCGCGTAATTCC TTTTTGATTTAATCT TERM 1559 1510255 - 1510228 - T 80 -5.7 -4.93365 | gap 1, opp_overlap 1510228 1510216 1510216 TTCTATAATCAAAAA GGAATTACGTCA TTATT CG-CGTAATTCC TTTTTGATTTAATCT guaB 1511757 - 1510273 - | inositol-5-monophosphate dehydrogenase ssl 1514779 - 1511924 - | DNA/RNA helicase LSL_1454 1515584 - 1514805 - | protein tyrosine phosphatase TERM 1560 1514930 - 1514944 + g 71 -5.7 -4.51363 | AAACTTCAATTGTTT CAGCA ATAAC TGCTG TTTTACTGTTTAATC TERM 1561 1515642 - 1515613 - R 93 -6.5 -5.55698 | opp_overlap 1515613 TACAATTCAAAAAAA CTAGGTCTACCTT AATT ATAATAGACCTAG CTTTTATTACTCAAA LSL_1455 1516983 - 1515664 - | magnesium and cobalt efflux protein corC TERM 1562 1515751 - 1515767 + g 72 -8.1 -3.37318 | GCCACCAAGTTCAAC TTCAGTT CCC AACTGAA TCTTGTAGTTATCTT TERM 1563 1517064 - 1517078 + r 72 -2.8 -5.37043 | TTTTTAATTCTTATA TGCTCT ATC ATAGCA TTTTTTATGTAAAAT LSL_1456 1517594 - 1517109 - | hypothetical protein TERM 1564 1517418 - 1517434 + g 70 -8.1 -3.30201 | opp_overlap 1517418 1517417, overlap 1517417 1517411 1517421 TGCATAATCAATAAC TAACTCA ATT TGAGTTA ATTTATTGTCTTTAA rluD 1518589 - 1517675 - | ribosomal large subunit pseudouridine synthase D LSL_1458 1519933 - 1518713 - | ABC transporter permease protein LSL_1459 1520616 - 1519933 - | ABC transporter, ATP-binding protein LSL_1460 1521682 - 1520609 - | hypothetical protein TERM 1565 1521855 - 1521831 - R 100 -7.9 -5.80364 | ATTCCAATAAAAAAA TGGCATGCCTA TAA TAGACACACCA TTTAAAAAATAATTA LSL_1461 1522734 - 1521868 - | fructokinase LSL_1462 1523012 - 1524349 + | Na+ driven multidrug efflux pump LSL_1463 1524346 - 1524732 + | lactoylglutathione lyase family protein TERM 1566 1524737 - 1524779 + T 100 -9.4 -5.27923 | opp_overlap 1524742, overlap 1524742 CTTATAAATAATCTA AAAAATCTCAAGCTGATATT TTT GATACCAGTTTGAGATTTTA TTTTTTATAGAATTG TERM 1567 1524742 - 1524774 + T 100 -9.3 -5.49579 | opp_overlap 1524742, overlap 1524737 AAATAATCTAAAAAA TCTCAAGCTGATATT TTT GATACCAGTTTGAGA TTTTATTTTTTATAG TERM 1568 1524774 - 1524742 - T 95 -8.6 -5.23016 | opp_overlap 1524742 1524737 AAATAATCTAAAAAA TCTCAAGCTGATAT TTTTG ATACCAGTTTGAGA TTTTATTTTTTATAG LSL_1464 1525511 - 1524837 - | cell surface hydrolase TERM 1569 1525389 - 1525401 + g 72 -2.7 -5.23016 | ATCTTGATAATTCAC TTCAA CAA TTGGA TTTTTTGCGTTCTTT TERM 1570 1525762 - 1525742 - R 100 -10.5 -5.83226 | opp_overlap 1525742 1525745 AAGGCAAGAAAAAAA GCACATGGA AAT TCCATGTAC TCTCTAACTATTATT nagB 1526477 - 1525773 - | glucosamine-6-phosphate isomerase TERM 1571 1525838 - 1525808 - G 70 -7 -3.71848 | overlap 1525809 1525811 CTTCTTCATCAATAA TTACTACAACATCA GGG TGATTTTGTAGTAC ACTTGCTGGAACTTC TERM 1572 1525837 - 1525809 - G 79 -10.5 -2.82895 | overlap 1525808 1525811 TTCTTCATCAATAAT TACTACAACATCA GGG TGATTTTGTAGTA CACTTGCTGGAACTT TERM 1573 1525835 - 1525811 - G 71 -8.7 -2.96249 | overlap 1525809 1525808 CTTCATCAATAATTA CTACAACATCA GGG TGATTTTGTAG TACACTTGCTGGAAC nagA 1526643 - 1527779 + | N-acetylglucosamine-6-phosphate deacetylase TERM 1574 1527790 - 1527826 + T 80 -5.9 -4.94902 | opp_overlap 1527790 AATAGTTAATTAAAA TCCCTACCAAGTTAC TTTAATT GCAACTTAGTGGGGA TTTTTCTAATCATTA TERM 1575 1527826 - 1527790 - T 85 -8.1 -4.45151 | opp_overlap 1527790 AATAGTTAATTAAAA TCCCTACCAAGTTAC TTTAATT GCAACTTAGTGGGGA TTTTTCTAATCATTA LSL_1467 1528968 - 1527832 - | succinyl-diaminopimelate desuccinylase TERM 1576 1529105 - 1529075 - R 93 -6.3 -5.64873 | CTTAATAAGAAAAAA GATAGCAATCGAT TCATG ATCAATCACTATC TTTTCAATTCTATTT fabG 1529873 - 1529115 - | 3-ketoacyl-(acyl-carrier-protein) reductase LSL_1469 1530100 - 1529873 - | hypothetical protein LSL_1470 1530611 - 1530114 - | hypothetical protein TERM 1577 1530750 - 1530706 - R 100 -12.4 -3.91488 | opp_overlap 1530711, overlap 1530711 AACTTTTTTAAATAA CAAAAGCGACTACAAGAACT ATTTA AATTCTCGCAGTCGCTTTTT CTTATGGGTTAATTT TERM 1578 1530711 - 1530745 + r 83 -5.7 -5.21236 | opp_overlap 1530706 1530711 TTTTAAATAACAAAA GCGACTACAAGAACT ATTTA AATTCTCGCAGTCGC TTTTTCTTATGGGTT TERM 1579 1530745 - 1530711 - R 100 -12.3 -5.00196 | opp_overlap 1530711, overlap 1530706 TTTTAAATAACAAAA GCGACTACAAGAACT ATTTA AATTCTCGCAGTCGC TTTTTCTTATGGGTT TERM 1580 1531100 - 1531077 - R 100 -7.6 -5.80364 | opp_overlap 1531077 1531080 ATTTCAACAAAAAAA CACTAAAACT TAGG AGTTTTAATG TTTCTTAAAAATTAT TERM 1581 1531167 - 1531188 + r 100 -6.7 -6.55664 | opp_overlap 1531167 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTTTTGTTTTA LSL_1471 1532490 - 1531201 - | ISL3 family transposase TERM 1582 1531877 - 1531887 + g 74 -5.4 -4.71584 | opp_overlap 1531877 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 1583 1532227 - 1532238 + g 70 -4.4 -4.77165 | opp_overlap 1532227 1532233, overlap 1532232 1532233 CTTGCATTCAGGACA CAGA TACT TCTG TTTTCTTATAGAAAG TERM 1584 1532405 - 1532425 + g 81 -9.9 -3.38522 | overlap 1532404 1532409 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA LSL_1472 1533499 - 1532627 - | DegV family protein crcB 1533915 - 1533571 - | CrcB family protein crcB 1534301 - 1533912 - | CrcB family protein TERM 1585 1534274 - 1534257 - G 85 -6.3 -5.28942 | opp_overlap 1534257 CATTCCAAAGAAAAA GACACTT ATTA AAGTGCC TAATTTCACGTTTTG trxA 1534682 - 1534359 - | thioredoxin LSL_1476 1535589 - 1534756 - | HAD superfamily hydrolase TERM 1586 1535677 - 1535658 - R 93 -6.4 -5.69793 | opp_overlap 1535658 ACAGCAAAGAAAAAA GAACCAGC CTAA ACCGGTTC TCTTCAATCATCTAA LSL_1477 1536825 - 1535689 - | LytR family transcriptional regulator LSL_1478 1537467 - 1537024 - | hypothetical protein LSL_1479 1538231 - 1537482 - | hypothetical protein TERM 1587 1538294 - 1538325 + r 76 -7.4 -4.18421 | opp_overlap 1538296, overlap 1538296 TATTTAAAGCAAAAA AAGACTGAAAAGAA TTTC TTCTTTCCAGTCTA TTATTTATCTACTTA TERM 1588 1538296 - 1538323 + r 86 -10 -3.67344 | opp_overlap 1538296, overlap 1538294 TTTAAAGCAAAAAAA GACTGAAAAGAA TTTC TTCTTTCCAGTC TATTATTTATCTACT TERM 1589 1538323 - 1538296 - R 100 -12.2 -5.72207 | opp_overlap 1538296 1538294 TTTAAAGCAAAAAAA GACTGAAAAGAA TTTC TTCTTTCCAGTC TATTATTTATCTACT cspC 1538545 - 1538345 - | cold shock protein troR 1539340 - 1538693 - | Iron-dependent repressor rluD 1540357 - 1539467 - | ribosomal large subunit pseudouridine synthase D LSL_1483 1541247 - 1540360 - | hypothetical protein TERM 1590 1541520 - 1541534 + G 70 -7.2 -3.83154 | ATCTAGGTGGCCCTA GAATTG CCG CAATTC TTTCAATTATCGTTA pgpB 1541321 - 1541947 + | phosphatidylglycerophosphatase B TERM 1591 1541961 - 1541989 + T 100 -11.9 -4.67123 | opp_overlap 1541960 1541966, overlap 1541966 AACCCTAATAATTAT TAAAAGCAGCACT CTA GGTGTTGCTTTTA TTTTACTTATTTTCA TERM 1592 1541966 - 1541984 + T 91 -7.4 -5.19998 | opp_overlap 1541966 1541960, overlap 1541961 TAATAATTATTAAAA GCAGCACT CTA GGTGTTGC TTTTATTTTACTTAT LSL_1485 1542816 - 1541992 - | hypothetical protein aes 1543687 - 1542866 - | endo-1,4-beta-xylanase TERM 1593 1543743 - 1543713 - R 77 -4 -5.45802 | TCCTTAAAACAAAAA GCCACCTTAGTGAT AAT ATGCCTAAGATAGC TAATAAACCTTATAT LSL_1487 1544101 - 1543760 - | hypothetical protein TERM 1594 1543822 - 1543810 - G 70 -4.1 -4.7629 | overlap 1543819 CTACCAATCCAAAAA GAACT GAA AGTCC CATGGAACGTGAGCG azlC 1544880 - 1544101 - | branched chain amino acid ABC transporter TERM 1595 1544325 - 1544309 - G 70 -3.7 -4.87133 | opp_overlap 1544309 ACCCCTGAAATAAAA CTAACTA AAA TTGTTAG CTTGTTGCGAATTTG LSL_1489 1545209 - 1544970 - | hypothetical protein xthA 1545303 - 1546130 + | exodeoxyribonuclease III TERM 1596 1546135 - 1546173 + T 100 -14.2 -3.33348 | opp_overlap 1546140, overlap 1546140 TTAATATCTAGACGA AAAAAGAGAGATTTTCGA ATT TTGAAAATCTCTCTTTTC TATTCTAATCTTCAA TERM 1597 1546168 - 1546140 - T 100 -11.9 -5.22312 | opp_overlap 1546135 1546140 ATCTAGACGAAAAAA GAGAGATTTTCGA ATT TTGAAAATCTCTC TTTTCTATTCTAATC TERM 1598 1546140 - 1546168 + T 100 -14.1 -4.75289 | opp_overlap 1546140, overlap 1546135 ATCTAGACGAAAAAA GAGAGATTTTCGA ATT TTGAAAATCTCTC TTTTCTATTCTAATC LSL_1491 1548952 - 1546178 - | hypothetical protein TERM 1599 1547357 - 1547336 - G 80 -10.3 -3.05715 | opp_overlap 1547335 AACTCCTGTACTTAA TTTAGCAGA TGCA TCTGCTAAA CTATTAGAAGCCTCT LSL_1492 1549913 - 1549122 - | hypothetical protein TERM 1600 1550019 - 1549978 - R 95 -10.5 -4.53303 | opp_overlap 1549983, overlap 1549983 TACTCCTACACAAAA TAAAATAGAGAAACTAAGA TTAT CCTTAATTTCTCTATTTTG AAAGAACTAAAATTT TERM 1601 1550014 - 1549983 - R 100 -10.4 -5.23292 | opp_overlap 1549983, overlap 1549978 CTACACAAAATAAAA TAGAGAAACTAAGA TTAT CCTTAATTTCTCTA TTTTGAAAGAACTAA TERM 1602 1549983 - 1550014 + r 77 -7.5 -4.08216 | opp_overlap 1549983 1549978 CTACACAAAATAAAA TAGAGAAACTAAG ATTATC CTTAATTTCTCTA TTTTGAAAGAACTAA LSL_1493 1550925 - 1550107 - | hypothetical protein TERM 1603 1551259 - 1551238 - R 93 -6.7 -5.48213 | opp_overlap 1551238 CAGTTAAAACAAAAA CTATTAGAC TTCT ATCTAATAG TTTGAAAATAATAAT LSL_1494 1551960 - 1551382 - | hypothetical protein LSL_1495 1552555 - 1551974 - | hypothetical protein LSL_1496 1553255 - 1552734 - | hypothetical protein LSL_1497 1553718 - 1553245 - | hypothetical protein TERM 1604 1553837 - 1553817 - R 100 -9.7 -5.4505 | opp_overlap 1553817 TGTCCCAACAAAAAA CCACCCTCA AAA CGAGAGTGG TCTATATCATAAAGA gpmA 1554548 - 1553862 - | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase TERM 1605 1554244 - 1554254 + g 76 -6.8 -4.4846 | overlap 1554242 TCACCATACTTTTCA GCAG CTG CTGC TTTGTTCTTACCTTG LSL_1499 1555829 - 1554642 - | aminotransferase TERM 1606 1554673 - 1554683 + g 95 -6.8 -5.9362 | opp_overlap 1554661 1554673 1554672 AAAGCATTTACTAAT GCAG ATA CTGC TTTTTTTATGTTTTC LSL_1500 1556885 - 1555830 - | hypothetical protein TERM 1607 1557922 - 1557898 - g 89 -6.4 -5.64321 | opp_overlap 1557919 AGAAGAAAATAAAAA CAGCGATCCC AAAAA AGAACCGCTG AAATAGCCTTTTTTA LSL_1501 1556996 - 1557928 + | drug/metabolite exporter family protein TERM 1608 1558045 - 1558064 + T 100 -7.1 -5.95286 | opp_overlap 1558045 ACGTTGTAGAATTGA GGGCGGT TCAAAT ACCGCTC TTTTTTATTTTTCAT TERM 1609 1558107 - 1558090 - T 100 -7.7 -5.58454 | opp_overlap 1558089 1558090 TTCATATCAAAAAAA CGTTGGC ACAT ACCAACG CTTTTACTAACCTTT LSL_1502 1558770 - 1558129 - | putative phosphatase TERM 1610 1558790 - 1558808 + r 86 -6 -5.50774 | opp_overlap 1558790, overlap 1558792 CACCTCAAGAAAAAA GCCAGTAA TAG TTACTGAC TTTTTGTTTATTATA TERM 1611 1558808 - 1558790 - R 100 -8.2 -5.46657 | opp_overlap 1558790 1558792 CACCTCAAGAAAAAA GCCAGTAA TAG TTACTGAC TTTTTGTTTATTATA galM 1559905 - 1558853 - | aldose 1-epimerase TERM 1612 1560028 - 1560002 - R 100 -8.8 -5.4505 | opp_overlap 1560005 1560008 CGTTCTAATAAAAAA GAAGAATGGAAT TCC AATCCACTCTTC TCGGCAACTCTAGAA LSL_1504 1560601 - 1560038 - | FMN reductase LSL_1505 1561661 - 1560603 - | luciferase-like monooxygenase TERM 1613 1561710 - 1561720 + H 74 -4 -5.1417 | opp_overlap 1561710 ACTTTATGTAAGTTA TTCT ACT AGAA TTTTTGGTTTTGTGA LSL_1506 1561811 - 1562122 + | MarR family transcriptional regulator TERM 1614 1562167 - 1562138 - T 93 -6.5 -5.53991 | opp_overlap 1562138 CACCTATCAAAAAAA GCTTGACACTC ATTTCTTA GAGTCTCAAGC TTTCTTTATTTTTAA TERM 1615 1562138 - 1562167 + T 82 -6.5 -4.94811 | opp_overlap 1562138 CACCTATCAAAAAAA GCTTGACACTC ATTTCTTA GAGTCTCAAGC TTTCTTTATTTTTAA galE 1563171 - 1562179 - | UDP-glucose 4-epimerase LSL_1508 1563310 - 1564035 + | GntR family transcriptional regulator TERM 1616 1564036 - 1564057 + F 87 -4.5 -5.80364 | gap 1, opp_overlap 1564036 ATCAATCTAGATTAA CTCTCA-TGT TTT GCACTGAGAG TTTTTTTCTTAACGT TERM 1617 1564073 - 1564104 + F 80 -10.5 -2.77547 | opp_overlap 1564082, overlap 1564064 1564082 TTTTTTTCTTAACGT TTTTTAAAATTGG TACGTT CCAATTTTAAAAA TGGTTGACATTTGAT TERM 1618 1564879 - 1564893 + G 71 -6.4 -4.15222 | overlap 1564877 TACTTTGAAGGTATG GGTTGG CAT CCAATC TTTGTTGAAGGCGAT LSL_1509 1564195 - 1566555 + | putative phosphoketolase TERM 1619 1566576 - 1566605 + T 86 -7.2 -4.77867 | opp_overlap 1566579, overlap 1566579 CAATTGAATAATTAA AAAGAGTCGAGA TTAATT TCTCGGCTCTTC TTTTATATTCTCTAT TERM 1620 1566579 - 1566602 + T 89 -8.9 -4.46621 | opp_overlap 1566579, overlap 1566576 TTGAATAATTAAAAA GAGTCGAGA TTAATT TCTCGGCTC TTCTTTTATATTCTC TERM 1621 1566602 - 1566579 - T 85 -6.7 -4.99435 | opp_overlap 1566579 1566576 TTGAATAATTAAAAA GAGTCGAGA TTAATT TCTCGGCTC TTCTTTTATATTCTC pncA 1567165 - 1566617 - | pyrazinamidase / nicotinamidase gpmB 1567308 - 1567898 + | phosphoglycerate mutase TERM 1622 1567941 - 1567903 - T 85 -6.8 -5.055 | opp_overlap 1567906, overlap 1567906 TCAATCGCTAAAAAA TAAGGTACCATCTCCT TTTTACT AGGGAATGGTACCTTT ATTTTATTATTAAAT TERM 1623 1567906 - 1567938 + T 95 -8.5 -4.96427 | opp_overlap 1567906 1567903 ATCGCTAAAAAATAA GGTACCATCTCCT TTTTACT AGGGAATGGTACC TTTATTTTATTATTA TERM 1624 1567938 - 1567906 - T 89 -8.5 -4.62085 | opp_overlap 1567906, overlap 1567903 ATCGCTAAAAAATAA GGTACCATCTCCT TTTTACT AGGGAATGGTACC TTTATTTTATTATTA treB 1569885 - 1567963 - | PTS system, trehalose-specific IIBC component TERM 1625 1568508 - 1568478 - G 70 -7 -3.73873 | overlap 1568481 GTAAACCGAAGATAA CTAGTAATTGATAG AAA CCACCAATTACCAA ACCGCCTACCCAACC TERM 1626 1568925 - 1568915 - G 71 -6.8 -4.14257 | GGTAAGAAGTAGAAA GCAG AGT CTGC CATTGCACTAACAGT TERM 1627 1569899 - 1569910 + H 74 -3 -5.50723 | ATGTTTTTCCCTCCT GAAA ACCT TTTC TTTTTCTTTTCGTAA TERM 1628 1570180 - 1570168 - g 78 -7.7 -4.2338 | CATCAATATAAAGAA GGAGA TTA TCTCC CAAGTGAACATCAAC treR 1570096 - 1570809 + | trehalose operon transcriptional repressor treC 1570828 - 1572489 + | trehalose-6-phosphate hydrolase TERM 1629 1572501 - 1572538 + T 100 -13.7 -4.49556 | opp_overlap 1572501 TTAAGCACATAAAAA TAGCATTTATTACGGCA TCTC TACCGTGATAAATGCTA TTTCTTTACTAAAAC TERM 1630 1572538 - 1572501 - T 100 -13.7 -5.04175 | opp_overlap 1572501 TTAAGCACATAAAAA TAGCATTTATTACGGCA TCTC TACCGTGATAAATGCTA TTTCTTTACTAAAAC LSL_1515 1573756 - 1572536 - | multidrug resistance efflux pump TERM 1631 1572642 - 1572620 - G 77 -4.8 -5.06816 | overlap 1572622 1572623 AGCTGTGAATAAAAA GACTGCTTGG TAA CCAAACAAAC TAGATACAAATGATC TERM 1632 1573880 - 1573858 - R 100 -7.1 -5.71712 | opp_overlap 1573858 GCCCATACAAAAAAA TGATGAACA ACTCG TGTCCATCA TTGTACTTACTGTAA TERM 1633 1574227 - 1574199 - R 100 -10.4 -5.05577 | AAAGTAAATTAAAAA GAACGAGCAGAT AAAAA ATCCACTCGTTC AATAATTAATTATTC TERM 1634 1577345 - 1577401 + r 100 -12.7 -3.11191 | gap 1, opp_overlap 1577352, overlap 1577352 1577394 TTAGAAAATAGTTAT ATTAAAACCCGCTAGGAATCAACGTT TTTAAT AACGTA-ATTTCTAGCGGGTTTTAAG TCTTGAGACTTTTTT TERM 1635 1577352 - 1577394 + r 100 -10.8 -4.28254 | gap 1, opp_overlap 1577352, overlap 1577345 ATAGTTATATTAAAA CCCGCTAGGAATCAACGTT TTTAAT AACGTA-ATTTCTAGCGGG TTTTAAGTCTTGAGA TERM 1636 1577394 - 1577352 - R 100 -10.8 -4.36262 | gap 1, opp_overlap 1577352 1577345 ATAGTTATATTAAAA CCCGCTAGGAATCAACGTT TTTAAT AACGT-AATTTCTAGCGGG TTTTAAGTCTTGAGA LSL_1516 1579361 - 1577448 - | N-acetylmuramoyl-L-alanine amidase LSL_1517 1580327 - 1579413 - | glucosyltransferase-S thrB 1581282 - 1580404 - | homoserine kinase thrA 1582573 - 1581287 - | homoserine dehydrogenase apbE 1582721 - 1583707 + | Iron-sulfur cluster assembly/repair protein TERM 1637 1583718 - 1583770 + F 74 -3.8 -5.24531 | gap 2, opp_overlap 1583718 1583746, overlap 1583731 ATTAAATTTAATTGA GCCTCCCTAATG--TTTTTGTTAA AATAAAC TTAACAAAATTTCATTAAGGAGGC TTTTTTATGGCAACT TERM 1638 1585029 - 1585013 - g 72 -5.9 -4.27519 | opp_overlap 1585013 ACTCGAGAATATAAA GAATCAA CTG CTGATTC TTGTCCAACAGTTAC thrC 1583777 - 1585264 + | threonine synthase TERM 1639 1585318 - 1585339 + F 87 -4.5 -5.7946 | AAAATTAAACTTTAA GGATACA TCTTGCAT TGTATCC TTTTTTTGTTCAAAA TERM 1640 1587295 - 1587283 - g 71 -3.4 -5.10933 | CTACTCAAAATAAAA CTGT TTATT ACAG CAAAAATGAAGCTTC LSL_1522 1585410 - 1587848 + | hypothetical protein TERM 1641 1587870 - 1587908 + T 72 -3.4 -5.30616 | gap 1, opp_overlap 1587872 1587882, overlap 1587896 TAACTATATTAAAAA GGCTTAAAATCA-CGTT ATTCCA AACGCTTATTTTAAGTC TTTTTATTTGACTGC LSL_1523 1589552 - 1587927 - | hypothetical protein rfaG 1590625 - 1589573 - | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase LSL_1525 1590785 - 1591963 + | hypothetical protein LSL_1526 1591963 - 1592763 + | polysachharide biosynthesis protein TERM 1642 1592824 - 1592789 - f 100 -15 -5.45652 | opp_overlap 1592789 ATCTCTAATAAAAAA GTAGCAGAGTTCAA TTTTTTGT TTGAACTCTGCTAC TTTTTTATTGAATTT TERM 1643 1592789 - 1592824 + F 100 -15 -5.52096 | opp_overlap 1592789 ATCTCTAATAAAAAA GTAGCAGAGTTCAA TTTTTTGT TTGAACTCTGCTAC TTTTTTATTGAATTT TERM 1644 1595702 - 1595681 - f 85 -6.7 -5.12172 | TATTAATAAAGAAAA TGTAACTAT TACC ATAGCTACA CATACCATTAATGCA TERM 1645 1597420 - 1597408 - f 72 -2.7 -5.43414 | ATTAGATATAAAAAA TACAA TTA TTGCA ATTAGAGTAAAAATA TERM 1646 1598439 - 1598406 - f 87 -5.3 -5.68039 | AAACGTATAAAAAAA TCCACATGCTTTCCT TGGA AGATCAACATGTGGA GGATATCATTATTTA LSL_1527 1598791 - 1599849 + | O-acetyl transferase TERM 1647 1599854 - 1599888 + F 79 -6.6 -4.68209 | opp_overlap 1599857, overlap 1599857 AACTTAAATAAGTTC AAAGCTTCAAGAAT TCTTTTT ATTCTTGGAGCTTA TTTATTTCTTCCAAT TERM 1648 1599857 - 1599885 + F 85 -8.3 -4.43668 | opp_overlap 1599857, overlap 1599854 TTAAATAAGTTCAAA GCTTCAAGAAT TCTTTTT ATTCTTGGAGC TTATTTATTTCTTCC uRH 1600019 - 1601002 + | inosine-uridine preferring nucleoside hydrolase TERM 1649 1601192 - 1601209 + G 71 -6.3 -4.24602 | opp_overlap 1601190 CTAACTTCAATCATT GTTGGTT TAAC AACCGAC TTATTTTCACTATAT LSL_1529 1601006 - 1601566 + | hypothetical protein TERM 1650 1601575 - 1601598 + T 100 -10.4 -5.60993 | opp_overlap 1601578 ATATTAATTTTTCAA CAAGATTGGC CTGG GCTAATCTTG TTTTTTTATCAAAAA TERM 1651 1601635 - 1601616 - T 90 -5.7 -5.52384 | opp_overlap 1601616 TTTTTATCAAAAAAA GCCGAGT ATCAAA ACTCGAC TTTCATATCTATTAG LSL_1530 1602939 - 1601647 - | oxidoreductase TERM 1652 1601724 - 1601747 + g 71 -7.4 -3.64103 | overlap 1601723 CCTTTGTTTCTGATT CAGATGCACC TGAT GTTGCGTCTG TTTCAGGTGTAGCTA LSL_1531 1603562 - 1602957 - | oxidoreductase TERM 1653 1603723 - 1603676 - R 85 -8.1 -4.41548 | opp_overlap 1603676 1603678 1603683, overlap 1603683 TTATATCTGACAAAA TAAAAAAGTGTAAAACCAGTA TTCATC TACTTATTTTACACTTTTATA ATTAATTTATTTAGC TERM 1654 1603716 - 1603683 - R 100 -6.2 -5.86976 | opp_overlap 1603678 1603676 1603683, overlap 1603676 TGACAAAATAAAAAA GTGTAAAACCAGTA TTCATC TACTTATTTTACAC TTTTATAATTAATTT dacC 1604884 - 1603730 - | D-alanyl-D-alanine serine-type carboxypeptidase napA 1606430 - 1605255 - | Na+/H+ antiporter TERM 1655 1606156 - 1606142 - G 77 -5.8 -4.68919 | overlap 1606145 AAAGATAAACTAAAA TAATTG GCG CAATTA CACCAAATAAGGCTA TERM 1656 1606511 - 1606490 - H 91 -4.5 -5.94713 | ATTTTACAAAAAAAA TATTTGTCT TAAA AGTCAAATA CCCTGGCTATTCAAT TERM 1657 1606992 - 1606973 - g 70 -3.6 -4.94262 | opp_overlap 1606975, overlap 1606975 CATACCAAAAAGAAA TACATCAT CGCG ATGATGTT ATTAATGCTTGGTAT LSL_1534 1606612 - 1609017 + | x-prolyl-dipeptidyl aminopeptidase TERM 1658 1609025 - 1609064 + T 100 -13.8 -4.7458 | opp_overlap 1609025 AAGAATAAACAAAAA CGCAGATGAAACAAGATG TTAT TATCTTGATTTATCTGCG TTTATTTATTCTAAT TERM 1659 1609064 - 1609025 - T 100 -10.9 -5.52807 | opp_overlap 1609025 AAGAATAAACAAAAA CGCAGATGAAACAAGAT GTTATT ATCTTGATTTATCTGCG TTTATTTATTCTAAT LSL_1535 1611736 - 1609082 - | hypothetical protein TERM 1660 1609984 - 1609954 - G 79 -10 -3.18776 | overlap 1609952 GGAAACCTACCAATA CTTGATTATTATTT CCT AAATAATAATCATG GCCATCAATTGTTAC TERM 1661 1611870 - 1611848 - R 88 -9.2 -4.30885 | opp_overlap 1611848 AAAATATATTTAAAA GGACAAACCA AAT TAGTTTGCCC TCTATACTACTTACT LSL_1536 1613412 - 1611877 - | hypothetical protein TERM 1662 1612132 - 1612117 - G 86 -6.2 -5.48213 | TATCGAAAATAAAAA GATTGT CCAT ACAATC AATACACTGCCATAA TERM 1663 1613466 - 1613433 - R 100 -13.5 -3.83026 | opp_overlap 1613437, overlap 1613437 TTCTCCTACATTAAA TAAAGAGTCATTAGT ATCA ACTAATAACTCTTTA CATAAACTCTATATA TERM 1664 1613462 - 1613437 - R 93 -9.9 -4.53602 | opp_overlap 1613437, overlap 1613433 CCTACATTAAATAAA GAGTCATTAGT ATCA ACTAATAACTC TTTACATAAACTCTA TERM 1665 1613437 - 1613462 + r 73 -7.7 -3.66378 | opp_overlap 1613437 1613433 CCTACATTAAATAAA GAGTCATTAGT ATCA ACTAATAACTC TTTACATAAACTCTA guaA 1615043 - 1613487 - | bifunctional GMP synthase/glutamine amidotransferase protein coaA 1616060 - 1615140 - | pantothenate kinase LSL_1539 1616167 - 1616763 + | GDSL-like lipase/acylhydrolase TERM 1666 1616807 - 1616775 - T 95 -11.5 -3.78233 | opp_overlap 1616775 ATAGCAATACGCAAA TAGCACTTACTCA AACCAAA CGAGTAAGTGCTA TTTCTATAAACTACC TERM 1667 1616775 - 1616807 + T 93 -10.8 -4.05033 | opp_overlap 1616775 ATAGCAATACGCAAA TAGCACTTACTC AAACCAAAC GAGTAAGTGCTA TTTCTATAAACTACC LSL_1540 1617579 - 1616839 - | ABC transporter, ATP-binding protein LSL_1541 1619071 - 1617572 - | amino acid ABC transporter TERM 1668 1619291 - 1619254 - R 74 -2.3 -5.54907 | gap 2, opp_overlap 1619254 TCTATAAAATAAAAA CATCAATG-AG-CTTGT TTATCT ACAAAACTTCATTGATG TTTCTCTAGTTATTT LSL_1542 1620791 - 1619301 - | amino acid permease LSL_1543 1621105 - 1621428 + | hypothetical protein LSL_1544 1621432 - 1622604 + | multidrug resistance efflux pump TERM 1669 1622618 - 1622653 + T 87 -7.7 -4.75219 | opp_overlap 1622618, overlap 1622613 AACACAACCAAAAAA GCAATTTTGAAAGAG ATTCAA CTCAATCAAAATTGC TTTTCTTCATGCTTA TERM 1670 1622653 - 1622618 - T 100 -7.7 -5.3671 | opp_overlap 1622618 1622613 AACACAACCAAAAAA GCAATTTTGAAAGAG ATTCAA CTCAATCAAAATTGC TTTTCTTCATGCTTA LSL_1545 1623321 - 1622674 - | hypothetical protein LSL_1546 1626176 - 1623354 - | hypothetical protein TERM 1671 1624295 - 1624265 - G 79 -10 -3.18776 | overlap 1624263 GGAAACCTACCAATA CTTGATTATTATTT CCT AAATAATAATCATG GCCATCAATTGTTAC TERM 1672 1626381 - 1626353 - R 90 -8.3 -4.84359 | TTATTGTCATAAAAA TAGCAATCCGT ATTATTA ACAGATTGCTA CTAAAATATATTATT LSL_1547 1627822 - 1626392 - | oligosaccharide translocase TERM 1673 1626994 - 1626966 - G 72 -4.7 -4.74989 | opp_overlap 1626967 1626971, overlap 1626971 AAACAAGATACAAAA TCAAATGAGTTAT ACA ATAACTCATTCAC TTTTTTTGTTTCTCC TERM 1674 1626989 - 1626971 - G 89 -9 -4.31065 | opp_overlap 1626967 1626971, overlap 1626966 AGATACAAAATCAAA TGAGTTAT ACA ATAACTCA TTCACTTTTTTTGTT TERM 1675 1626971 - 1626989 + g 77 -9 -3.62012 | opp_overlap 1626971 1626966, overlap 1626967 AGATACAAAATCAAA TGAGTTAT ACA ATAACTCA TTCACTTTTTTTGTT glf 1628940 - 1627825 - | UDP-galactopyranose mutase TERM 1676 1629005 - 1629015 + H 75 -2.6 -5.54079 | AATTCTATGTCACAT TATA CCC TATA TTTTTTACTTTTTCC LSL_1549 1629110 - 1629991 + | hypothetical protein TERM 1677 1629982 - 1630011 + T 100 -13.8 -4.20696 | opp_overlap 1629982, overlap 1629985 TAATATGTACCAAAA TAACGGTTAGGA AAAAGA TCCTAACCGTTA TTTTCACATTAATAC TERM 1678 1630011 - 1629982 - T 100 -13.8 -4.30809 | opp_overlap 1629982 1629985 TAATATGTACCAAAA TAACGGTTAGGA AAAAGA TCCTAACCGTTA TTTTCACATTAATAC TERM 1679 1629985 - 1630008 + T 100 -11.1 -4.21933 | opp_overlap 1629982, overlap 1629982 TATGTACCAAAATAA CGGTTAGGA AAAAGA TCCTAACCG TTATTTTCACATTAA LSL_1550 1630685 - 1630020 - | undecaprenyl-phosphate beta-glucosephosphotransferase LSL_1551 1631739 - 1630765 - | LytR family transcriptional regulator LSL_1552 1632535 - 1631759 - | phosphotyrosine-protein phosphatase TERM 1680 1632644 - 1632628 - R 85 -5.1 -5.67283 | opp_overlap 1632629, overlap 1632629 AAGGCAAACAAAAAA CCGACAA TTG TTGCCGA TTTTTAAACAAATTT TERM 1681 1632855 - 1632832 - R 100 -8.2 -5.37171 | opp_overlap 1632832 AATATTAAACAAAAA GCCCTTACCT AAAA AGATAAGAGC TACATTACAACTATA LSL_1553 1633612 - 1632887 - | tyrosine-protein kinase TERM 1682 1633388 - 1633374 - G 71 -6.4 -4.20027 | overlap 1633370 AACAAAGTAGATAAA CCTTGC TTA GCAAAG GATGCAGCAATATTT LSL_1554 1634427 - 1633630 - | chain length regulator TERM 1683 1633796 - 1633808 + g 74 -6.3 -4.43501 | opp_overlap 1633796 1633794, overlap 1633802 TCAGTTAAGAAACTA CTATC CTT GATAG TTTTATCAGTAAATT TERM 1684 1634679 - 1634665 - R 79 -7.2 -4.46212 | TCTCCCATTACAAAA GTATCA ATA TGATAC TCCCTCATATCACTT rfbX 1637225 - 1635996 - | polysacharide biosyntheis protein rfaG 1638484 - 1637261 - | glycosyltransferase LSL_1557 1639679 - 1638504 - | hypothetical protein TERM 1685 1638760 - 1638750 - G 71 -3.2 -5.16237 | overlap 1638753 AATTTCACTAAAAAA GACC AAC AGTC CCAAACTACTGTTTT TERM 1686 1639017 - 1638984 - G 73 -7.8 -3.74841 | opp_overlap 1638984 1638979 AGAAATAATTGGAAA TATCAGAAAAATAA ATAGAA TTATTTTTCTAATA TTAACTTTCTTATAT LSL_1558 1640622 - 1639699 - | capsular polysaccharide synthesis protein rfaG 1641709 - 1640597 - | glycosyltransferase TERM 1687 1641061 - 1641079 + gr 73 -7.6 -3.57389 | opp_overlap 1641065, overlap 1641060 TTTTATTTTTTTCAT GATATTTT TCA AAAATATC TATTATTCTTCGATG rfaG 1642755 - 1641712 - | glycosyltransferase TERM 1688 1641802 - 1641751 - G 93 -8.4 -5.40625 | opp_overlap 1641754 1641757, overlap 1641753 1641754 1641761 ATACGATAGAAAAAA TATGCATAAACTCATATTATTCTT GTAC AAAAATAATATGAGTTTATTCTTT TTTTTCCTTACATTA TERM 1689 1641800 - 1641753 - G 100 -11 -4.32846 | opp_overlap 1641754 1641757, overlap 1641751 1641754 1641761 ACGATAGAAAAAATA TGCATAAACTCATATTATTCTT GTAC AAAAATAATATGAGTTTATTCT TTTTTTTCCTTACAT TERM 1690 1641799 - 1641754 - G 95 -14.5 -3.18081 | opp_overlap 1641754 1641757, overlap 1641753 1641751 1641761 CGATAGAAAAAATAT GCATAAACTCATATTATTCTT GTAC AAAAATAATATGAGTTTATTC TTTTTTTTCCTTACA TERM 1691 1641754 - 1641799 + g 100 -12.3 -5.95166 | opp_overlap 1641753 1641751 1641754 1641761, overlap 1641757 CGATAGAAAAAATAT GCATAAACTCATATTATTCTT GTAC AAAAATAATATGAGTTTATTC TTTTTTTTCCTTACA TERM 1692 1641757 - 1641796 + g 100 -12.6 -5.01676 | opp_overlap 1641754 1641753 1641751 1641761, overlap 1641754 TAGAAAAAATATGCA TAAACTCATATTATTCTT GTAC AAAAATAATATGAGTTTA TTCTTTTTTTTCCTT TERM 1693 1641792 - 1641761 - G 93 -11.2 -4.02468 | opp_overlap 1641757 1641754, overlap 1641754 1641753 1641751 AAAAATATGCATAAA CTCATATTATTCTT GTAC AAAAATAATATGAG TTTATTCTTTTTTTT rfaG 1643889 - 1642795 - | glycosyltransferase TERM 1694 1644373 - 1644341 - R 72 -5.8 -4.38092 | opp_overlap 1644333 1644341, overlap 1644338 1644333 CAATAACTAAAATAA GCCTATTATTAC TTTAAGTTT GTAATAATAGAC TTCATTTTAATTACT LSL_1562 1644536 - 1644411 - | hypothetical protein TERM 1695 1644575 - 1644596 + r 100 -6.7 -6.55664 | opp_overlap 1644575 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTTTTGTTTTA LSL_1563 1645898 - 1644609 - | ISL3 family transposase TERM 1696 1645285 - 1645295 + g 74 -5.4 -4.71584 | opp_overlap 1645285 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 1697 1645635 - 1645646 + g 70 -4.4 -4.77165 | opp_overlap 1645635 1645641, overlap 1645640 1645641 CTTGCATTCAGGACA CAGA TACT TCTG TTTTCTTATAGAAAG TERM 1698 1645813 - 1645833 + g 81 -9.9 -3.38522 | overlap 1645812 1645817 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA LSL_1564 1647705 - 1646014 - | DNA helicase LSL_1565 1649729 - 1647690 - | hypothetical protein TERM 1699 1649885 - 1649860 - R 87 -5.5 -5.53436 | ACAGAATATAAAAAA GGCCAAAAACA ATTT CATTTTTGACC TTTAATATAAATTAT LSL_1566 1651320 - 1649923 - | hypothetical protein LSL_1567 1652181 - 1651345 - | hypothetical protein LSL_1568 1653345 - 1652242 - | Beta-N-acetylhexosaminidase TERM 1700 1653424 - 1653436 + r 80 -6.3 -4.90079 | TAAATAAAAAGGTTG TTCAC TAT GTGAA TTTTGTTATTAAAAT rfbD 1654400 - 1653564 - | dTDP-4-dehydrorhamnose reductase TERM 1701 1654114 - 1654124 + g 74 -5.4 -4.652 | opp_overlap 1654114 CTTACATAGAGTAAT GTTG CCC CAAC TTTTTGACATGCTTT TERM 1702 1654431 - 1654450 + r 72 -9.2 -2.77538 | opp_overlap 1654432, overlap 1654430 1654429 1654447 CAATGATAAAGTAAA ACCCCAGG AAAA CCTGGGGA AATTTTTATTGCCCA TERM 1703 1654449 - 1654432 - R 100 -12.7 -4.64383 | opp_overlap 1654431 1654430 1654429 1654447 AATGATAAAGTAAAA CCCCAGG AAAA CCTGGGG AAATTTTTATTGCCC rfbB 1655487 - 1654456 - | dTDP-glucose 4,6-dehydratase TERM 1704 1655333 - 1655353 + g 77 -4.8 -5.18866 | gap 1, opp_overlap 1655333 ACTAACTCTACACGA TCTTG-TGG TAAG CCAGCAAGA TTTTCTTTATTTCCA rfbC 1656080 - 1655499 - | dTDP-4-dehydrorhamnose 3,5-epimerase rfbA 1656952 - 1656083 - | glucose-1-phosphate thymidylyltransferase TERM 1705 1657073 - 1657026 - R 83 -4.5 -5.58522 | gap 1, opp_overlap 1657021 1657026 GACATAAAATAAAAA CTTC-TTTAAAGCACGTATATA ATTAA TAAATACTTACTTTAAAAGAAG TTTTCTATCTTAACT rfaG 1658079 - 1657078 - | glycosyltransferase TERM 1706 1658137 - 1658119 - R 100 -9.6 -5.54907 | opp_overlap 1658117 1658119 TTGATAAAATAAAAA GCCAGCAA AAT TTGCTAGC TCTTCTCCCCTTATT rfaG 1658973 - 1658161 - | glycosyltransferase TERM 1707 1659396 - 1659386 - g 76 -6.8 -4.51196 | opp_overlap 1659386 1659385, overlap 1659381 GTTAAACGTATAAAA GGTG AAT CACC GTTTAAAAAAATCAC LSL_1575 1659206 - 1659847 + | hypothetical protein TERM 1708 1659878 - 1659851 - T 100 -12.8 -4.8622 | opp_overlap 1659851 TTGTTCAATTAAAAA TGAGGCTGGGAC TCAA ATCCCAACCTCA TTTTTATTTATATAG TERM 1709 1659851 - 1659878 + T 100 -9.9 -5.42975 | opp_overlap 1659851 TTGTTCAATTAAAAA TGAGGCTGGGA CTCAAA TCCCAACCTCA TTTTTATTTATATAG LSL_1576 1660526 - 1659882 - | hypothetical protein LSL_1577 1661207 - 1660542 - | HAD superfamily hydrolase LSL_1578 1662652 - 1661297 - | multidrug resistance protein B LSL_1579 1662840 - 1663004 + | hypothetical protein TERM 1710 1663015 - 1663038 + F 100 -9 -5.58179 | TATAATAAACACGTG GAAGTTGGAT GTAG ATTCAACTTC TTTTTTGTTATACTA LSL_1580 1663081 - 1663539 + | metal-dependent phosphohydrolase LSL_1581 1663807 - 1664196 + | MerR family transcriptional regulator TERM 1711 1664201 - 1664233 + T 91 -7.8 -5.23765 | opp_overlap 1664201 CGGAAGAGTAACAAA TACCCCATAAAATC CAGCC GATTCCATGGGGTA TTTTTCTATTATTTA TERM 1712 1664233 - 1664201 - T 100 -12.2 -4.33153 | opp_overlap 1664201 CGGAAGAGTAACAAA TACCCCATAAAATC CAGCC GATTCCATGGGGTA TTTTTCTATTATTTA LSL_1582 1665021 - 1664242 - | NADPH-dependent FMN reductase TERM 1713 1665067 - 1665018 - G 86 -6 -5.42259 | GTACTTTCAAAAAAA TCACGTCCTATTAATGTTAC TTTTTTCATT ATAACACTAATTAGACGTGA TCTTTTTAATTTATC thiD 1665877 - 1665083 - | phosphomethylpyrimidine kinase TERM 1714 1665932 - 1665907 - R 95 -9.1 -5.07652 | TCCTCTAAAAGAAAA GCCAACAAGAA TTAC TTCTCATTGGC ATCAACTTCACTTAT LSL_1584 1666489 - 1665947 - | hypothetical protein LSL_1585 1667529 - 1666729 - | ABC transporter permease protein LSL_1586 1668190 - 1667522 - | ABC transporter, ATP-binding protein TERM 1715 1667815 - 1667827 + g 85 -6.3 -5.26247 | CTAGTGGATTTTTAG CTAGA TTT TCTAG TTTTGTTTCTTTTAA LSL_1587 1669059 - 1668193 - | ABC transporter substrate binding protein TERM 1716 1668962 - 1668972 + g 82 -5.4 -5.23292 | CCATAAAAATCTGTC GTTG TTA CAAC TTTTATTTTATCTGC TERM 1717 1669083 - 1669093 + r 70 -4 -5.01497 | opp_overlap 1669083 ACTCTTTCTTATATA GTAA TCA TTAC TTTTTATATCCTAAT TERM 1718 1669280 - 1669246 - R 100 -11.7 -5.20633 | opp_overlap 1669246 AAAAATATACAAAAA CAGCATTTATAGCTA CTTAC TAACTACAAATGCTG TTAAATTAATCATTA LSL_1588 1670174 - 1669293 - | hypothetical protein TERM 1719 1669469 - 1669453 - G 72 -8.1 -3.48924 | overlap 1669468 GGAGCTGGTAGATAA GCTTTAT TCA ATAAAGC AACTACCTTGCGACC TERM 1720 1670038 - 1670060 + g 70 -2 -5.25799 | overlap 1670029 CTTTGTTCTGTCTTT TCAGATTTTT TAG ACACATCTGA TTTTTGTGTTGTTTT TERM 1721 1670545 - 1670510 - H 70 -6.2 -4.25388 | gap 1, opp_overlap 1670519, overlap 1670513 1670519 CATAGTAAAAGTAAA TAATCATAACCACCCGT AAA ACGGGTGGTT-TGCTCC ACGGCTATAAGCCGT TERM 1722 1670542 - 1670513 - H 93 -10.1 -4.22369 | gap 1, opp_overlap 1670519, overlap 1670510 1670519 AGTAAAAGTAAATAA TCATAACCACCCGT AAA ACGGGTGGTT-TGC TCCACGGCTATAAGC TERM 1723 1670519 - 1670537 + H 100 -14.6 -3.72893 | opp_overlap 1670513 1670510 1670519 AGTAAATAATCATAA CCACCCGT AAA ACGGGTGG TTTGCTCCACGGCTA TERM 1724 1670537 - 1670519 - H 100 -14.6 -3.65738 | opp_overlap 1670519, overlap 1670513 1670510 AGTAAATAATCATAA CCACCCGT AAA ACGGGTGG TTTGCTCCACGGCTA TERM 1725 1670592 - 1670567 - H 80 -8.9 -3.63837 | opp_overlap 1670569, overlap 1670556 1670569 ATAAGCCGTTAAGAA CAGCCAGCGTC TCAA GGCGCTGGCTT TCTCTTCGTTCAAAC TERM 1726 1670569 - 1670590 + H 100 -13.7 -4.2772 | opp_overlap 1670556 1670567 1670569 AAGCCGTTAAGAACA GCCAGCGTC TCAA GGCGCTGGC TTTCTCTTCGTTCAA TERM 1727 1670590 - 1670569 - H 90 -11.5 -3.39556 | opp_overlap 1670569, overlap 1670556 1670567 AAGCCGTTAAGAACA GCCAGCGTC TCAA GGCGCTGGC TTTCTCTTCGTTCAA TERM 1728 1671211 - 1671229 + H 100 -14.6 -5.68438 | ATAATACTTCATTTT CCACTCGC ATA GCGAGTGG TTTTTTGTTTCGTAC TERM 1729 1671314 - 1671285 - H 74 -5.7 -4.55544 | opp_overlap 1671288, overlap 1671288 AAGACATAATCAAAA TAAGAGACGTGCC AACT AGCATGTCTCTTT ATTTATTAAGATTTT TERM 1730 1671288 - 1671311 + H 90 -8.9 -4.68209 | opp_overlap 1671285 1671288 ACATAATCAAAATAA GAGACGTGC CAACTA GCATGTCTC TTTATTTATTAAGAT TERM 1731 1671311 - 1671288 - H 79 -7.4 -4.36586 | opp_overlap 1671288, overlap 1671285 ACATAATCAAAATAA GAGACGTGCC AACT AGCATGTCTC TTTATTTATTAAGAT TERM 1732 1671381 - 1671370 - H 77 -3 -5.55698 | CATAATTCAAAAAAA GTTA TCAT TAAC TATACCAAAACAGAA TERM 1733 1671617 - 1671657 + G 78 -10.5 -2.64194 | overlap 1671616 AACATTAGTCTTTTA CCCAGGTGGCTTAGTTG AACCCGA TAGTTACGCCACCTGGG CTTATCAAGTTTCTA LSL_1591 1671456 - 1672142 + | hypothetical protein TERM 1734 1672202 - 1672176 - T 93 -8.8 -4.92239 | opp_overlap 1672176 CTAAAAATTCAAAAA TCGCCAAAGATT ATA AGTCTTTGACGA TTTTTTTATTGGCAT TERM 1735 1672176 - 1672202 + T 100 -8.8 -5.80364 | opp_overlap 1672176 CTAAAAATTCAAAAA TCGCCAAAGATT ATA AGTCTTTGACGA TTTTTTTATTGGCAT LSL_1592 1674010 - 1672241 - | hypothetical protein TERM 1736 1673077 - 1673065 - G 71 -3.5 -5.1244 | opp_overlap 1673075 TTATCAACATAAAAA TTATT CCT AATAA GTAACTTATTTTTTC TERM 1737 1673075 - 1673085 + g 76 -4 -5.27923 | opp_overlap 1673065 AAAAATTATTCCTAA TAAG TAA CTTA TTTTTTCTACGGTTC LSL_1593 1674786 - 1674040 - | hypothetical protein LSL_1594 1675916 - 1674816 - | translation-associated GTPase LSL_1595 1676128 - 1675934 - | hypothetical protein parB 1677020 - 1676145 - | chromosome partitioning protein, DNA-binding protein TERM 1738 1676257 - 1676267 + g 73 -4 -5.08601 | GCTTTAACAGCAACT TTTG TTC CAAA TTTTTCTTGAAGTAA TERM 1739 1676387 - 1676407 + g 73 -4 -5.07053 | opp_overlap 1676389, overlap 1676389 GTTCTAATTGTCTAA CAGTTAAG CCTTC CTTAACAG TTTTTTCAGCTAATT TERM 1740 1676580 - 1676600 + g 70 -4.1 -4.66163 | TAGTCGCTCTGATAC TTGAGTTTG AGT TAAATTCAA TTTTTCCATCAAAGT LSL_1597 1677777 - 1677010 - | chromosome partitioning protein parA parB 1678637 - 1677795 - | chromosome partitioning protein TERM 1741 1678321 - 1678331 + g 74 -5.4 -4.79667 | opp_overlap 1678313, overlap 1678313 TCAATAACTGCCATT GAAG CAG CTTC TTTTTCGTCCATTTT gidB 1679393 - 1678668 - | glucose-inhibited division protein B TERM 1742 1678824 - 1678836 + g 70 -4.1 -4.66953 | ACCTAAAACTTCGAT TGCTT TTT GAGCA TTTTTCAACTCTTCA TERM 1743 1679548 - 1679514 - R 100 -8.1 -5.40072 | opp_overlap 1679514 1679516, overlap 1679516 TTGCTTGCAAAAAAA TAGTAGAAAACTATC TTCAC GATAATTCTCTACCA TTCTTTCTTATTTTA TERM 1744 1679546 - 1679516 - R 87 -8.5 -4.34482 | opp_overlap 1679514 1679516, overlap 1679514 GCTTGCAAAAAAATA GTAGAAAACTATC TTCAC GATAATTCTCTAC CATTCTTTCTTATTT LSL_1600 1680464 - 1679556 - | L-2-hydroxyisocaproate dehydrogenase TERM 1745 1681595 - 1681579 - g 74 -3 -5.2189 | TGAATCACTAAAAAA GACGAT TAAGT ATCATC CTGATTACATCGAAA LSL_1601 1680578 - 1682254 + | glycerophosphodiester phosphodiesterase TERM 1746 1682258 - 1682311 + T 91 -7.8 -5.23765 | opp_overlap 1682258 CTATATAGCTAAAAA GCAGTTTGCTTGAG-ATTTTAGGATT TTTT AGTCCTAATCTACTCAAG-AAACTGC TTTTTGTATTATTTA TERM 1747 1682311 - 1682258 - T 71 -5.6 -4.72846 | opp_overlap 1682258 CTATATAGCTAAAAA GCAGTTTGCTTGAG-ATTTTAGGATT TTTT AGTCCTAATCTACTCAAG-AAACTGC TTTTTGTATTATTTA LSL_1602 1684965 - 1682320 - | calcium-transporting ATPase TERM 1748 1683186 - 1683174 - G 80 -6.3 -4.72986 | TAGTTCTAGCAAAAA CTTGA TTT TCAAG TGCTGCCTTCTGCTT LSL_1603 1685225 - 1685761 + | hypothetical protein TERM 1749 1685767 - 1685803 + T 100 -13.4 -5.13016 | opp_overlap 1685767 GACTAAATAAAAAAA TCATCATTATTTAACT AAATC AGTTGAATAATGATGA TTTTTGATTTTAATT TERM 1750 1685803 - 1685767 - T 100 -11.9 -5.99154 | opp_overlap 1685767 GACTAAATAAAAAAA TCATCATTATTTAACTA AAT CAGTTGAATAATGATGA TTTTTGATTTTAATT thiJ 1686386 - 1685817 - | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme LSL_1605 1687017 - 1686388 - | hypothetical protein TERM 1751 1687113 - 1687143 + r 70 -8.4 -2.99544 | opp_overlap 1687114, overlap 1687112 1687117 TAATTTTAAAAACAA ACAATCTACCAGAA AAC TTCTGATAGATTGC ATTATTATTAATCAT TERM 1752 1687142 - 1687114 - R 100 -14.1 -4.88293 | opp_overlap 1687113 1687112 1687117 AATTTTAAAAACAAA CAATCTACCAGAA AAC TTCTGATAGATTG CATTATTATTAATCA LSL_1606 1687819 - 1687151 - | sortase LSL_1607 1691614 - 1687868 - | ATP-dependent nuclease subunit A LSL_1608 1695200 - 1691619 - | ATP-dependent nuclease subunit B LSL_1609 1695311 - 1695679 + | hypothetical protein TERM 1753 1695734 - 1695697 - T 100 -14.3 -5.10767 | opp_overlap 1695692 1695698, overlap 1695698 TATCGAATACAAAAA CCCCCATAGTTACTAGC TGAA ACTAGCAACTATGGGGT TTAAATTTTAATCTT TERM 1754 1695733 - 1695698 - T 100 -17.8 -3.65375 | opp_overlap 1695692 1695698, overlap 1695697 ATCGAATACAAAAAC CCCCATAGTTACTAGC TGAA ACTAGCAACTATGGGG TTTAAATTTTAATCT TERM 1755 1695698 - 1695733 + T 100 -14.9 -3.95448 | opp_overlap 1695698 1695697, overlap 1695692 ATCGAATACAAAAAC CCCCATAGTTACTAG CTGAAA CTAGCAACTATGGGG TTTAAATTTTAATCT prsA 1696720 - 1695752 - | ribose-phosphate pyrophosphokinase proA 1698061 - 1696814 - | gamma-glutamyl phosphate reductase TERM 1756 1697584 - 1697595 + g 71 -3 -5.16206 | opp_overlap 1697584 CCAAAGCTTGACGAA TAAC TTTA GTTA TTTTTATATTCGTTT proB 1698876 - 1698073 - | glutamate 5-kinase TERM 1757 1699002 - 1698967 - R 100 -8.6 -5.60993 | opp_overlap 1698967 TTGTCTATAAAAAAA GTGATTCTCATATT TTTTATCG AATATGAAAATCAC TTTTTACCTAAGCTT TERM 1758 1698967 - 1699002 + r 80 -7.1 -4.67011 | opp_overlap 1698967 TTGTCTATAAAAAAA GTGATTCTCATATTT TTTATC GAATATGAAAATCAC TTTTTACCTAAGCTT manA 1699975 - 1699010 - | mannose-6-phosphate isomerase TERM 1759 1700187 - 1700235 + r 100 -12.7 -3.11732 | opp_overlap 1700190 1700198, overlap 1700197 1700198 AAATTATTAATTAGA GAATAAGAAAAGGTAGTACCAGA AAT TCTGATACTACCCTTTTTTAATC TTCAATAAATTTAAC TERM 1760 1700232 - 1700190 - R 100 -15.2 -3.61404 | opp_overlap 1700187 1700197 1700198, overlap 1700198 TTATTAATTAGAGAA TAAGAAAAGGTAGTACCAGA AAT TCTGATACTACCCTTTTTTA ATCTTCAATAAATTT TERM 1761 1700197 - 1700225 + r 95 -8.9 -5.27779 | opp_overlap 1700190 1700198, overlap 1700187 1700198 TTAGAGAATAAGAAA AGGTAGTACCAGA AAT TCTGATACTACCC TTTTTTAATCTTCAA TERM 1762 1700224 - 1700198 - R 100 -14.6 -4.97957 | opp_overlap 1700197 1700187 1700198, overlap 1700190 TAGAGAATAAGAAAA GGTAGTACCAGA AAT TCTGATACTACC CTTTTTTAATCTTCA TERM 1763 1700198 - 1700224 + r 95 -12.4 -3.75583 | opp_overlap 1700198 1700190, overlap 1700197 1700187 TAGAGAATAAGAAAA GGTAGTACCAGA AAT TCTGATACTACC CTTTTTTAATCTTCA LSL_1614 1700547 - 1700230 - | hypothetical protein LSL_1615 1701341 - 1700550 - | hypothetical protein LSL_1616 1702206 - 1701328 - | ABC transporter, ATP-binding protein LSL_1617 1702577 - 1702209 - | GntR family transcriptional regulator TERM 1764 1702700 - 1702665 - R 100 -16.4 -5.4505 | opp_overlap 1702661 CTTGTCAACAAAAAA GCAGTCGATCAATGAT TTTT ATCATCAATCGACTGC CTCAAATTTTAAATT mtlD 1703862 - 1702714 - | mannitol-1-phosphate 5-dehydrogenase LSL_1619 1704305 - 1703862 - | PTS system, mannitol-specific IIA component mtlA 1706110 - 1704320 - | PTS system, mannitol-specific IIBC component TERM 1765 1704625 - 1704636 + g 81 -5.8 -4.91573 | overlap 1704632 1704634 CATTACCTAAGTCGC CTGC TTCT GCAG TTTTTACTGTATTTT TERM 1766 1706072 - 1706088 + g 88 -7.3 -5.03961 | overlap 1706085 ACCTAACTTTTGAAC CTTCGCT TTA AGTGAAG TTTTCTTCTTTGCTT TERM 1767 1706338 - 1706363 + r 87 -7.7 -4.75308 | opp_overlap 1706338 TTGACCAATAAAAAA TGCAATGAATT CTTC AACTCATTGCA TTTTTACATATTAAT TERM 1768 1706363 - 1706338 - R 100 -9.9 -5.5112 | opp_overlap 1706338 TTGACCAATAAAAAA TGCAATGAATT CTTC AACTCATTGCA TTTTTACATATTAAT terC 1707099 - 1706374 - | tellurium resistance protein LSL_1622 1707612 - 1707202 - | Cro/CI family transcriptional regulator TERM 1769 1707700 - 1707720 + r 73 -8.3 -3.50532 | opp_overlap 1707700, overlap 1707696 1707692 TTATGCATAAAAAAA CGAGGTCTT ACT AAAACCTCG TTACTTAATTTAGCT TERM 1770 1707720 - 1707700 - R 100 -10.5 -5.64274 | opp_overlap 1707700 1707696 1707692 TTATGCATAAAAAAA CGAGGTCTT ACT AAAACCTCG TTACTTAATTTAGCT LSL_1623 1708559 - 1707741 - | amino acid ABC transporter substrate-binding protein TERM 1771 1708631 - 1708652 + r 100 -6.7 -6.55664 | opp_overlap 1708631 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTTTTGTTTTA LSL_1624 1709954 - 1708665 - | ISL3 family transposase TERM 1772 1709341 - 1709351 + g 74 -5.4 -4.71584 | opp_overlap 1709341 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 1773 1709691 - 1709702 + g 70 -4.4 -4.77165 | opp_overlap 1709691 1709697, overlap 1709696 1709697 CTTGCATTCAGGACA CAGA TACT TCTG TTTTCTTATAGAAAG TERM 1774 1709869 - 1709889 + g 81 -9.9 -3.38522 | overlap 1709868 1709873 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA LSL_1625 1710835 - 1710089 - | amino acid ABC transporter ATP-binding protein LSL_1626 1711553 - 1710858 - | amino acid ABC transporter permease TERM 1775 1711628 - 1711599 - R 100 -9.5 -5.45802 | TTCTCAAAATAAAAA TGCTATTAGTC TTGTCTCT GACTAATAGCA TTCACCGATTTAAAT TERM 1776 1711750 - 1711726 - R 70 -4.3 -4.86133 | overlap 1711727 1711741 1711746 1711748 TATACATACCAAAAA GCATGTTACAC ATC ATGCAACATGG TTGAACCATCAACAT TERM 1777 1711749 - 1711727 - R 71 -7.8 -3.50595 | overlap 1711726 1711741 1711746 1711748 ATACATACCAAAAAG CATGTTACAC ATC ATGCAACATG GTTGAACCATCAACA TERM 1778 1711915 - 1711875 - R 100 -12.9 -5.04601 | opp_overlap 1711873 1711875 GCCAGAAATTAAAAA CACCTTACAATCGTTAA TTTTTTT CTAACGATTATAAGGTG TCTTGTAAAAGTATA TERM 1779 1711875 - 1711915 + r 82 -10 -3.22951 | opp_overlap 1711875, overlap 1711873 GCCAGAAATTAAAAA CACCTTACAATCGTTA ATTTTTTTC TAACGATTATAAGGTG TCTTGTAAAAGTATA glmS 1713757 - 1711940 - | D-fructose-6-phosphate amidotransferase LSL_1628 1715986 - 1713902 - | transcription regulator nhaP 1717649 - 1716072 - | Na+/H+ antiporter TERM 1780 1717758 - 1717737 - R 90 -5.1 -5.72053 | opp_overlap 1717737 TAAGCAAATAAAAAA GAGCGGT AAATTAAA ACCGCCC TCAATTCTACAATGT TERM 1781 1717924 - 1717884 - R 100 -10.1 -4.74012 | gap 1, opp_overlap 1717884 AGGATAAAATTAAAA TAGTTGAAGATTATGCCT GTTTGA AAGC-TAATCTTCAACTA TTCTCTATTTCAAGC TERM 1782 1717884 - 1717924 + r 73 -7.9 -3.76232 | gap 1, opp_overlap 1717884 AGGATAAAATTAAAA TAGTTGAAGATTATGCCT GTTTGA AAGC-TAATCTTCAACTA TTCTCTATTTCAAGC glpF 1718657 - 1717950 - | glycerol uptake facilitator protein LSL_1631 1719037 - 1718669 - | hypothetical protein dAK 1719621 - 1719037 - | dihydroxyacetone kinase dAK 1720645 - 1719650 - | dihydroxyacetone kinase dAK 1720791 - 1721747 + | dihydroxyacetone kinase LSL_1635 1722272 - 1721748 - | hypothetical protein TERM 1783 1721859 - 1721885 + g 85 -4.5 -5.64421 | opp_overlap 1721854 1721859 TGTAGATATACCTAA GCATAGGAT CCACATATT ATCCTGTGC TTTTTTATTTGAGAT TERM 1784 1722394 - 1722369 - R 100 -10.5 -4.79756 | opp_overlap 1722369, overlap 1722361 TAGACAACGCAAAAA GTGCGTATAGC ATAT ACTACACGCAC TTCGATATTTTAACA brnQ 1723800 - 1722418 - | branched chain amino acid ABC transporter carrier protein TERM 1785 1723941 - 1723902 - H 100 -15.2 -5.8187 | CACGCAATAAAAAAA TAGACGCCCCTAAATCGA CTAC TCGATTCAAGGACGCCTA TCGCGTGGTACCACC TERM 1786 1724385 - 1724396 + G 71 -3 -5.10765 | CAAAAATCGTTGTCT TTGT AGTT ACAA TTTTGTTGTTTATTT LSL_1637 1724339 - 1724605 + | hypothetical protein TERM 1787 1724654 - 1724630 - T 100 -10.9 -5.75538 | opp_overlap 1724630 TTCAAAAAATAAAAA TGGTAAATCAA AAA TCGATTTACCA TTTTTTTATTTTCTA TERM 1788 1724630 - 1724654 + T 100 -8.7 -6.14618 | opp_overlap 1724630 TTCAAAAAATAAAAA TGGTAAATCAA AAA TCGATTTACCA TTTTTTTATTTTCTA LSL_1638 1725490 - 1724660 - | DNA-entry nuclease TERM 1789 1725585 - 1725561 - R 100 -8.6 -5.75599 | TAAAGCATAAAAAAA CTCCACAGCT AGGGA AACTGCGGAG AAAAAGGAAATATAT TERM 1790 1726454 - 1726470 + r 82 -9.5 -3.66896 | opp_overlap 1726453 1726450 1726449 1726454 ACAATTCAAATTAAT CGACTAA TTG TTAGTCG TTATATATATATCAA TERM 1791 1726470 - 1726454 - R 74 -9.5 -2.74183 | opp_overlap 1726454, overlap 1726453 1726450 1726449 ACAATTCAAATTAAT CGACTAA TTG TTAGTCG TTATATATATATCAA TERM 1792 1726488 - 1726510 + r 100 -12.1 -5.38249 | opp_overlap 1726488 ATATATATATCAAAA GCGTTGAGA AAAAC TCTCAACGC TTTTTTATGCTTCAT TERM 1793 1726510 - 1726488 - R 100 -12.8 -4.41956 | opp_overlap 1726488 ATATATATATCAAAA GCGTTGAGAA AAA CTCTCAACGC TTTTTTATGCTTCAT LSL_1639 1728446 - 1726515 - | Zinc-transporting ATPase LSL_1640 1728560 - 1728910 + | ArsR family transcriptional regulator TERM 1794 1728914 - 1728946 + T 80 -7.2 -4.66625 | gap 1, opp_overlap 1728914 GATGATATTTAAAAA GAGTGCTGAGAAAAT TTCA ATTCTCT-AGCACTC TTTCTTTATCTCTAT TERM 1795 1728946 - 1728914 - T 93 -9.4 -4.7173 | gap 1, opp_overlap 1728914 GATGATATTTAAAAA GAGTGCTGAGAAAAT TTCA ATTCTCT-AGCACTC TTTCTTTATCTCTAT LSL_1641 1730652 - 1728958 - | Myosin-crossreactive antigen TERM 1796 1730800 - 1730784 - R 100 -6.5 -5.95946 | opp_overlap 1730784 TTAATAATAAAAAAA TCGGACC TAA AGCCCGA TTCTTAATTTTCTTA LSL_1642 1731550 - 1730813 - | deoxyguanosine kinase LSL_1643 1731785 - 1732252 + | nucleoside deoxyribosyltransferase TERM 1797 1732263 - 1732289 + F 100 -8.8 -5.53079 | TCTAAACTCTTTTCA CTACCAGTATTA TCA TGTTACTGGTAG TTTTTTATATATTTT azlC 1732323 - 1733030 + | branched chain amino acid ABC transporter LSL_1645 1733017 - 1733343 + | branched chain amino acid ABC transporter TERM 1798 1733339 - 1733387 + T 100 -16.3 -2.50511 | opp_overlap 1733346, overlap 1733339 1733346 TCATTCGTATGGTAA TTTAAAAGGCTATGCAGCTTAAC ATT GGTAAGCTACATAGCCTTTTAAC ATCTTCAATTATGAA TERM 1799 1733339 - 1733388 + T 100 -14.7 -3.18054 | gap 1, opp_overlap 1733346, overlap 1733339 1733346 TCATTCGTATGGTAA T-TTAAAAGGCTATGCAGCTTAAC ATT GGTAAGCTACATAGCCTTTTAACA TCTTCAATTATGAAC TERM 1800 1733346 - 1733380 + T 100 -14.4 -4.1964 | opp_overlap 1733346, overlap 1733339 1733339 TATGGTAATTTAAAA GGCTATGCAGCTTAAC ATT GGTAAGCTACATAGCC TTTTAACATCTTCAA TERM 1801 1733380 - 1733346 - T 100 -16.6 -4.2803 | opp_overlap 1733346 1733339 1733339 TATGGTAATTTAAAA GGCTATGCAGCTTAAC ATT GGTAAGCTACATAGCC TTTTAACATCTTCAA LSL_1646 1733878 - 1733396 - | MarR family transcriptional regulator LSL_1647 1734691 - 1733912 - | hypothetical protein xerC 1736031 - 1734886 - | Phage integrase TERM 1802 1735191 - 1735206 + g 70 -4 -4.93877 | CCATTGCATTGATAC CGACTT TTAA AAGTTG TTTTCTTTGCTCAAG LSL_1649 1737266 - 1736463 - | Cro/CI family transcriptional regulator LSL_1650 1737629 - 1738444 + | antirepressor TERM 1803 1738495 - 1738473 - f 85 -10.8 -3.25088 | GCCTAAACTTATTAA TTTAGCATTT TGA AAATGCTAAA CCCCACCACAAACAA LSL_1651 1738547 - 1738852 + | hypothetical protein LSL_1652 1738867 - 1739079 + | hypothetical protein LSL_1653 1739076 - 1739408 + | hypothetical protein LSL_1654 1739411 - 1739530 + | hypothetical protein TERM 1804 1739565 - 1739545 - f 93 -6.2 -5.69793 | opp_overlap 1739545 AGAGCAAATAAAAAA GCTAGGTA ATAAA TACCTAAC TTACTAGAGAAATTA LSL_1655 1739662 - 1740012 + | hypothetical protein LSL_1656 1740027 - 1740452 + | hypothetical protein LSL_1657 1740458 - 1741228 + | hypothetical protein LSL_1658 1741243 - 1742637 + | DNA primase LSL_1659 1742930 - 1743238 + | hypothetical protein LSL_1660 1743297 - 1743737 + | hypothetical protein LSL_1661 1743744 - 1743959 + | hypothetical protein TERM 1805 1744007 - 1744030 + GF 80 -2.5 -5.63103 | gap 1, opp_overlap 1744010, overlap 1744008 TATACACTGACTTAA T-GAGTGCTA TTAAT TGGCACTCTA TTTTTTTACTTGCAA TERM 1806 1744008 - 1744028 + GF 82 -7.6 -4.45473 | opp_overlap 1744010, overlap 1744007 ATACACTGACTTAAT GAGTGCTA TTAAT TGGCACTC TATTTTTTTACTTGC LSL_1662 1743973 - 1744083 + | hypothetical protein LSL_1663 1744055 - 1744237 + | hypothetical protein TERM 1807 1744315 - 1744285 - gf 100 -10.6 -5.89921 | opp_overlap 1744293 AGGATAATAAAAAAA GCTAACCACGATTA CAA CAATCGTAATTAGC TAACACACTTAAGCT LSL_1664 1744198 - 1744314 + | hypothetical protein TERM 1808 1744349 - 1744374 + F 83 -8.3 -4.29106 | AACATCCACGGTTAA GGGTAACAGGT TCGG AGCTGTTGCCC TTTATTCATATACAA LSL_1665 1744445 - 1744636 + | hypothetical protein TERM 1809 1744640 - 1744661 + F 100 -7.3 -5.8187 | opp_overlap 1744640 GAACGCTTTTAATTA CATGTTGCC ACTT GGTAGCATG TTTTTTTATTGCATC TERM 1810 1744830 - 1744809 - g 91 -5.1 -5.85244 | AAGCAAAACAAAAAA GCCACGATA TAAA CACCGTAGC TCAATGACTAAAGAT LSL_1666 1744651 - 1744902 + | hypothetical protein TERM 1811 1746112 - 1746090 - T 100 -10.6 -5.9218 | CAGACAATAAAAAAA CTTGCCACCG TAT CAGTAGCAAG CTAGAGATTATTATT TERM 1812 1746194 - 1746174 - T 82 -2.5 -5.98781 | CATAACTAAAAAAAA GCGCTGG ACGGATG CCAACAC CTAATATATATATTC LSL_1667 1747008 - 1746394 - | TetR family transcriptional regulator LSL_1668 1747364 - 1747921 + | hypothetical protein TERM 1813 1747935 - 1747967 + F 88 -6.5 -5.40072 | AATTCGATATTTTTA TAGTCTGGAAATT CTATTGT AATTTTCAGGCTA TTTTTTTAACCAACA pepO 1748052 - 1749953 + | oligoendopeptidase O TERM 1814 1749965 - 1749983 + F 95 -6 -5.85737 | opp_overlap 1749965 1749966, overlap 1749966 GTAGAATTTAAGAAA TCAGAAGT TAA GCTTCTGG TTTTTTTATTAATAT TERM 1815 1749966 - 1749982 + F 74 -7.3 -4.09002 | opp_overlap 1749966 1749965, overlap 1749965 TAGAATTTAAGAAAT CAGAAGT TAA GCTTCTG GTTTTTTTATTAATA TERM 1816 1750571 - 1750552 - g 72 -5.8 -4.2803 | gap 1 TATTGCAAGTCAAAA GGCTAATGA AAG TCATT-GCC AAGAAGTGGTCTTCC LSL_1670 1750082 - 1750927 + | D-alanine aminotransferase TERM 1817 1750938 - 1750957 + T 100 -6.5 -6.34616 | opp_overlap 1750938 GTTAAACGAAAAAAA TCGAGAA CTTTGC TTCTCGA TTTTTTTTATTTTAC TERM 1818 1750957 - 1750938 - T 100 -6.5 -5.72207 | opp_overlap 1750938 GTTAAACGAAAAAAA TCGAGAA CTTTGC TTCTCGA TTTTTTTTATTTTAC LSL_1671 1751557 - 1750964 - | hypothetical protein LSL_1672 1752569 - 1753069 + | hypothetical protein TERM 1819 1753083 - 1753141 + T 100 -20.2 -2.62896 | opp_overlap 1753085 1753089, overlap 1753084 1753085 1753089 AGGTTTTGGATATAG GACCAATTTTCTAATTTGTGCAAGTAAA CGT TTGATTTGTATAAATTAGAAAATTGGTC CTATATTTATATCGT TERM 1820 1753085 - 1753139 + T 100 -17 -2.8459 | opp_overlap 1753085 1753089, overlap 1753083 1753084 1753089 GTTTTGGATATAGGA CCAATTTTCTAATTTGTGCAAGTAAA CGT TTGATTTGTATAAATTAGAAAATTGG TCCTATATTTATATC TERM 1821 1753139 - 1753085 - T 80 -10.4 -2.69151 | opp_overlap 1753085 1753083 1753084 1753089, overlap 1753089 GTTTTGGATATAGGA CCAATTTTCTAATTTGTGCAAGTAAA CGT TTGATTTGTATAAATTAGAAAATTGG TCCTATATTTATATC TERM 1822 1753089 - 1753135 + T 83 -10.6 -3.29074 | opp_overlap 1753085 1753089, overlap 1753085 1753083 1753084 TGGATATAGGACCAA TTTTCTAATTTGTGCAAGTAAA CGT TTGATTTGTATAAATTAGAAAA TTGGTCCTATATTTA TERM 1823 1753438 - 1753471 + T 100 -14.2 -4.72846 | opp_overlap 1753438 1753441 AACAACTAGACGTAA TAAGGTTGAAAAGT CGCTAA ACTTTTCAACCTTA TTTTTCACTCTATAA TERM 1824 1753471 - 1753438 - T 100 -14.9 -3.17382 | opp_overlap 1753438, overlap 1753441 AACAACTAGACGTAA TAAGGTTGAAAAGTC GCTA AACTTTTCAACCTTA TTTTTCACTCTATAA TERM 1825 1753468 - 1753441 - T 95 -12.2 -3.71888 | opp_overlap 1753438, overlap 1753438 AACTAGACGTAATAA GGTTGAAAAGTC GCTA AACTTTTCAACC TTATTTTTCACTCTA wecD 1753999 - 1753481 - | acetyltransferase TERM 1826 1754231 - 1754255 + r 100 -11.5 -6.06529 | opp_overlap 1754230 1754231 1754233 CAGAGATCTATTAAG CAGGTAGGACG ATT CGTTCTATCTG TTTTTTTTGTATATA TERM 1827 1754313 - 1754275 - R 77 -9.1 -3.31232 | opp_overlap 1754275, overlap 1754274 TTTTGTATATAAAAT TGGCATTATATCATTTT ATAAG AATCTGATATAATGCCA TTATTCATTACTATA TERM 1828 1754275 - 1754313 + r 81 -9.1 -3.84915 | opp_overlap 1754275 1754274 TTTTGTATATAAAAT TGGCATTATATCATTTT ATAAG AATCTGATATAATGCCA TTATTCATTACTATA LSL_1674 1755205 - 1754774 - | agmatine deiminase LSL_1675 1757948 - 1755378 - | ABC transporter permease protein TERM 1829 1755927 - 1755944 + g 74 -3.5 -5.38951 | TTGTCCATTAGTTCT GTAATTA TTTT TAATTGC TTTTTTATATGCATT TERM 1830 1757074 - 1757085 + g 71 -3 -5.1417 | opp_overlap 1757064, overlap 1757064 TCCAACAAAAGTTTT TGTT TATC AACA TTTTTACTTTTCTGA LSL_1676 1758660 - 1757959 - | amino acid ABC transporter ATP-binding protein LSL_1677 1758783 - 1759340 + | TetR family transcriptional regulator LSL_1678 1759530 - 1759820 + | hypothetical protein TERM 1831 1761181 - 1761169 - g 71 -6.3 -4.14739 | opp_overlap 1761141 GCACTTATGTCAAAA GCAAA ATC TTTGC AATATAAATTATCAT TERM 1832 1761494 - 1761465 - g 70 -2.3 -5.28481 | gap 1, overlap 1761472 1761481 TATTGAAGCAAAAAA TCAATTAGATGGAA AAG TTCTATC-AACTGA AGAACAAAATAAATT LSL_1679 1761082 - 1762980 + | PPE repeat-containing protein TERM 1833 1763021 - 1762991 - T 95 -8.6 -4.93696 | opp_overlap 1762991 TTTAAATATTAAAAA GAATTATGTTTT ATACACA AAAACATAATTC TTTTTTTATTTCAAA TERM 1834 1762991 - 1763021 + T 100 -8.6 -5.95539 | opp_overlap 1762991 TTTAAATATTAAAAA GAATTATGTTTT ATACACA AAAACATAATTC TTTTTTTATTTCAAA TERM 1835 1763183 - 1763208 + T 100 -14.9 -5.48163 | opp_overlap 1763183 GAGATTATATAAAAA GAAGCTAGGAT GTAA ATCCTAGCTTC TTTTTTAATTTCTTT TERM 1836 1763208 - 1763183 - T 100 -14.9 -5.02502 | opp_overlap 1763183 GAGATTATATAAAAA GAAGCTAGGAT GTAA ATCCTAGCTTC TTTTTTAATTTCTTT LSL_1680 1763692 - 1763213 - | glyoxalase family protein LSL_1681 1764560 - 1763721 - | 2,5-diketo-D-gluconic acid reductase LSL_1682 1764691 - 1765047 + | MarR family transcriptional regulator LSL_1683 1765900 - 1765136 - | hypothetical protein LSL_1684 1766534 - 1765881 - | ABC transporter, ATP-binding protein TERM 1837 1766632 - 1766660 + r 90 -8.9 -4.72188 | opp_overlap 1766632 TTTTTAAACAAAAAA GGTTCAAAGCC ACTTACC GGCCTTGAACC TTTATTTTCAATTCA TERM 1838 1766660 - 1766632 - R 100 -11.8 -5.63517 | opp_overlap 1766632 TTTTTAAACAAAAAA GGTTCAAAGCCA CTTAC CGGCCTTGAACC TTTATTTTCAATTCA LSL_1685 1767910 - 1766684 - | major facilitator superfamily permease LSL_1686 1768192 - 1768686 + | thioredoxin peroxidase TERM 1839 1768702 - 1768737 + T 93 -9.9 -4.45771 | opp_overlap 1768702 TTTAACCACAAAAAA TAGCAGCTCTTGATT ATTTTA AATCAAAGGCTGCTA TTTCTCTTTTAAAAT TERM 1840 1768737 - 1768702 - T 100 -9.9 -5.37345 | opp_overlap 1768702 TTTAACCACAAAAAA TAGCAGCTCTTGATT ATTTTA AATCAAAGGCTGCTA TTTCTCTTTTAAAAT LSL_1687 1769270 - 1768746 - | hypothetical protein LSL_1688 1769882 - 1769289 - | TetR family transcriptional regulator TERM 1841 1769485 - 1769515 + g 84 -8.4 -4.46212 | opp_overlap 1769494 AAATACTCCATCCTT TTAAGCAATTCTCG AGT CAAGATTTGCTTAA TTTTATGGTAAAACA TERM 1842 1770049 - 1770023 - R 100 -9.6 -5.20154 | ATAGAATGTAAAAAA CCCAAAAGACTA TAG TAATCTTTTGAG CTAAGTTATTATTTT LSL_1689 1771020 - 1770073 - | Dyp-type peroxidase family protein LSL_1690 1771564 - 1771106 - | hypothetical protein LSL_1691 1771995 - 1771561 - | hypothetical protein TERM 1843 1772137 - 1772115 - R 100 -9.2 -5.42265 | opp_overlap 1772115 TTAAACGACAAAAAA GCCACCTATC CAC GATAGATGAC CTTTATAATATTATC mmuM 1773071 - 1772148 - | homocysteine methyltransferase LSL_1693 1773185 - 1774552 + | amino acid permease LSL_1694 1774586 - 1775026 + | phosphate-starvation-inducible protein PsiE TERM 1844 1775041 - 1775092 + T 91 -7.4 -5.22137 | opp_overlap 1775047, overlap 1775045 1775047 ATTTATCATAATAAA CAAAAATCGCACCATTTCAAAGTT TAAT AACTAGGAAATGGTGCGATATTAA TTTTATTTTCTAATT TERM 1845 1775045 - 1775088 + T 100 -12.6 -3.94607 | opp_overlap 1775047, overlap 1775041 1775047 ATCATAATAAACAAA AATCGCACCATTTCAAAGTT TAAT AACTAGGAAATGGTGCGATA TTAATTTTATTTTCT TERM 1846 1775047 - 1775086 + T 100 -15.2 -3.52451 | opp_overlap 1775047, overlap 1775045 1775041 CATAATAAACAAAAA TCGCACCATTTCAAAGTT TAAT AACTAGGAAATGGTGCGA TATTAATTTTATTTT TERM 1847 1775086 - 1775047 - T 100 -15.2 -5.50774 | opp_overlap 1775045 1775041 1775047 CATAATAAACAAAAA TCGCACCATTTCAAAGTT TAAT AACTAGGAAATGGTGCGA TATTAATTTTATTTT LSL_1695 1776057 - 1775110 - | oligopeptide transport ATP-binding protein oppF oppD 1777119 - 1776076 - | oligopeptide transport ATP-binding protein TERM 1848 1777072 - 1777083 + g 74 -5.8 -4.4874 | TTCGCCGGCATAGGT GTGG AAAT CCAC TTTTAAATTTTTAAC oppC 1778158 - 1777130 - | oligopeptide transport system permease protein oppB 1779093 - 1778158 - | oligopeptide transport system permease protein TERM 1849 1779193 - 1779164 - R 89 -7.9 -5.07652 | opp_overlap 1779164 TGGGGTAAAATAAAA TCGGTGACTAAAT CTAA ATCTAGCCCCCGA TTTATTAAATAATTT LSL_1699 1780842 - 1779229 - | oligopeptide-binding protein oppA TERM 1850 1779351 - 1779367 + g 72 -5.9 -4.32233 | GTGGTGTTACACCTT GATCTTG AAG TAAGATC TTTTCAGCTTTTTCT TERM 1851 1781305 - 1781335 + r 87 -9.9 -3.80026 | opp_overlap 1781310, overlap 1781310 TATTAAATTGGTACA AAAAATAGTCGCA ATTGA TGCGACTATTTTC TTCTATATTTAATTC TERM 1852 1781310 - 1781330 + r 100 -9.8 -4.91357 | opp_overlap 1781310, overlap 1781305 AATTGGTACAAAAAA TAGTCGCA ATTGA TGCGACTA TTTTCTTCTATATTT TERM 1853 1781330 - 1781310 - R 100 -9.8 -5.25803 | opp_overlap 1781310 1781305 AATTGGTACAAAAAA TAGTCGCA ATTGA TGCGACTA TTTTCTTCTATATTT LSL_1700 1782744 - 1781344 - | amino acid permease TERM 1854 1783108 - 1783075 - R 100 -7.6 -5.45802 | TTTTTAAAATAAAAA CCAACTACATACCA TAATCT CGGTATATAATTGG CTTCCATTTTTATGC efp 1783675 - 1783118 - | protein translation elongation factor P LSL_1702 1784627 - 1783827 - | HAD superfamily hydrolase gpmB 1785302 - 1784646 - | phosphoglycerate mutase TERM 1855 1785412 - 1785392 - R 100 -10.5 -5.18371 | opp_overlap 1785392 1785391 1785387 1785394 TTTTACAAAATAAAA GACTAGAGA AAT TCCCTAGTC ATTAATTTTTATGCA LSL_1704 1787331 - 1785421 - | cation transport ATPases LSL_1705 1787594 - 1787331 - | hypothetical protein LSL_1706 1787985 - 1787611 - | hypothetical protein TERM 1856 1788067 - 1788100 + r 100 -9.7 -5.17744 | opp_overlap 1788067 TCAATAAAAGAAAAA TATACTGGCCTAAGT TTTT ACCTATGCCAGTATA TTTTTCTTAATCTAT TERM 1857 1788100 - 1788067 - R 100 -11.9 -5.62288 | opp_overlap 1788067 TCAATAAAAGAAAAA TATACTGGCCTAAGT TTTT ACCTATGCCAGTATA TTTTTCTTAATCTAT LSL_1707 1789249 - 1788107 - | glycerate kinase LSL_1708 1789491 - 1789850 + | ArsR family transcriptional regulator TERM 1858 1789882 - 1789858 - g 81 -5.9 -4.97312 | overlap 1789879 AAAATTAATGAAAAA GATATTAATTA TTC TAACTAATACC AGATACTATGGTAAT LSL_1709 1789850 - 1790539 + | ThiJ/PfpI family protein TERM 1859 1790553 - 1790583 + F 90 -8.4 -4.91109 | AAATCTTATCTCTTT TAAGCAAATGACCG TAG CCTTCATTTGCTTA TTTTTATGGTCAGAA LSL_1710 1790654 - 1792468 + | glycerophosphodiester phosphodiesterase TERM 1860 1792537 - 1792486 - T 89 -9.1 -4.4017 | opp_overlap 1792488 1792492, overlap 1792489 1792492 GTAAGTTCGACAAAA CAATAAGTGTCATATATCAAGTT TTTGTT AACTTAATATATGACACTTTCTT TTTTGATACAAATTT TERM 1861 1792488 - 1792535 + T 91 -7.3 -5.14965 | opp_overlap 1792486 1792489 1792492, overlap 1792492 AAGTTCGACAAAACA ATAAGTGTCATATATCAAGTT TTTGTT AACTTAATATATGACACTTTC TTTTTTGATACAAAT TERM 1862 1792534 - 1792489 - T 100 -13 -4.31397 | opp_overlap 1792488 1792492, overlap 1792486 1792492 AGTTCGACAAAACAA TAAGTGTCATATATCAAGTT TTTGTT AACTTAATATATGACACTTT CTTTTTTGATACAAA TERM 1863 1792492 - 1792531 + T 100 -12.5 -5.0917 | opp_overlap 1792489 1792486 1792492, overlap 1792488 TCGACAAAACAATAA GTGTCATATATCAAGTT TTTGTT AACTTAATATATGACAC TTTCTTTTTTGATAC TERM 1864 1792531 - 1792492 - T 100 -14.7 -4.26938 | opp_overlap 1792492 1792488, overlap 1792489 1792486 TCGACAAAACAATAA GTGTCATATATCAAGTT TTTGTT AACTTAATATATGACAC TTTCTTTTTTGATAC LSL_1711 1793546 - 1792554 - | LacI family transcription regulator LSL_1712 1795206 - 1793548 - | oligo-1,6-glucosidase TERM 1865 1794170 - 1794154 - G 85 -9.5 -3.92542 | opp_overlap 1794154 CCCACGTTGAAATAA TGTTAGC ATT GCTAACA TTTTTGCTGACTTTT TERM 1866 1794154 - 1794170 + g 100 -9.5 -4.79667 | opp_overlap 1794154 CCCACGTTGAAATAA TGTTAGC ATT GCTAACA TTTTTGCTGACTTTT LSL_1713 1795624 - 1795199 - | PTS system, N-acetylgalactosamine-specific IIA component LSL_1714 1796460 - 1795651 - | PTS system, mannose-specific IID component TERM 1867 1796050 - 1796062 + g 77 -3.4 -5.44119 | opp_overlap 1796049 1796050 TAACATCCATAAAAC TGCT CCAAC AGCA TTTTTTTGAAGTGCC LSL_1715 1797253 - 1796453 - | PTS system, mannose-specific IIC component LSL_1716 1797743 - 1797258 - | PTS system, mannose-specific IIAB component TERM 1868 1797879 - 1797889 + H 82 -2.6 -6.02919 | AATTGCAAGCGTTTT TATA AAT TATA TTTTTTTGTTTGTAA TERM 1869 1798079 - 1798105 + H 100 -7.4 -6.04419 | GGTAGATATCAAGGG CACAGGACAA TTTCATT TTGTTCTGTG TTTTTTTATTGTTTT metA 1798177 - 1798983 + | homoserine O-succinyltransferase TERM 1870 1799788 - 1799776 - g 71 -3.3 -5.03145 | GAAGTTGCTAAAAAA GAAGG TTT CCTAC CTGGTATCTCTGCTG cysK 1798996 - 1799919 + | cysteine synthase TERM 1871 1799987 - 1799936 - T 100 -12.8 -5.53436 | gap 1, opp_overlap 1799939, overlap 1799939 ATATAATACAAAAAA TAATAATCGCTAAAGATT-ACGT AATTAAA ACGTTAATCTTTAGCGATTATTT TAGTTTAGAGATCTA TERM 1872 1799984 - 1799939 - T 100 -14.5 -4.80737 | gap 1, opp_overlap 1799939, overlap 1799936 TAATACAAAAAATAA TAATCGCTAAAGATT-ACGT AATTAAA ACGTTAATCTTTAGCGATTA TTTTAGTTTAGAGAT TERM 1873 1799939 - 1799984 + T 100 -14.5 -4.55128 | gap 1, opp_overlap 1799939 1799936 TAATACAAAAAATAA TAATCGCTAAAGATT-ACGT AATTAAA ACGTTAATCTTTAGCGATTA TTTTAGTTTAGAGAT LSL_1719 1802332 - 1801589 - | hypothetical protein LSL_1720 1803093 - 1802359 - | hypothetical protein LSL_1721 1803210 - 1803719 + | Acyl-CoA hydrolase trxB 1803877 - 1804812 + | thioredoxin reductase TERM 1874 1804827 - 1804849 + T 100 -13.6 -5.46276 | opp_overlap 1804827 ATGAGTTACAAAAAA GGTAGTGATT TTT AATCACTACC TTTTTTCTGTATATT TERM 1875 1804849 - 1804827 - T 100 -13.6 -5.28778 | opp_overlap 1804827 ATGAGTTACAAAAAA GGTAGTGATT TTT AATCACTACC TTTTTTCTGTATATT LSL_1723 1804967 - 1804845 - | hypothetical protein TERM 1876 1804905 - 1804876 - G 82 -8.7 -4.00124 | gap 1, opp_overlap 1804876 1804882 TATTCTAGAAGGAAA GCGATAGCT-TCTT TAT AAGATAGCTTTCGC TCATTCATTACCTGC TERM 1877 1805357 - 1805323 - R 90 -5.1 -5.84011 | opp_overlap 1805335 1805337, overlap 1805326 1805330 AATAAAAAATAAAAA GATGAAATAAAAGCT GTATT AGCCCCTATTACATC TTTTTCTTCTAATAT TERM 1878 1805335 - 1805357 + r 72 -3.4 -5.2291 | opp_overlap 1805323 1805330 1805326, overlap 1805337 AAAGATGAAATAAAA GCTGTATTAG CCC CTATTACATC TTTTTCTTCTAATAT purA 1806677 - 1805385 - | adenylosuccinate synthetase TERM 1879 1806901 - 1806881 - R 90 -4 -6.04953 | opp_overlap 1806881 ATATAAATAAAAAAA TACTCGAC AATAA ACCGAGTA TTTTTAACTATATTA LSL_1725 1807486 - 1806914 - | hypothetical protein dnaB 1808951 - 1807560 - | replicative DNA helicase TERM 1880 1809062 - 1809114 + r 74 -6 -4.58644 | gap 1, opp_overlap 1809062 1809064 1809070, overlap 1809064 1809070 TATTTTTGACTAATA T-ATAAAAACATCCAATACTAGATA ATAC TATCTACCATTGGATGTTTTCATCA TTTTAATTCTTACTT TERM 1881 1809113 - 1809062 - R 89 -12 -3.1372 | opp_overlap 1809062 1809064 1809070, overlap 1809064 1809070 TATTTTTGACTAATA TATAAAAACATCCAATACTAGATA ATAC TATCTACCATTGGATGTTTTCATC ATTTTAATTCTTACT TERM 1882 1809111 - 1809064 - R 100 -14.6 -3.12895 | opp_overlap 1809062 1809064 1809070, overlap 1809062 1809070 TTTTTGACTAATATA TAAAAACATCCAATACTAGATA ATAC TATCTACCATTGGATGTTTTCA TCATTTTAATTCTTA TERM 1883 1809064 - 1809111 + r 82 -10.2 -3.22061 | opp_overlap 1809064 1809062 1809070, overlap 1809062 1809070 TTTTTGACTAATATA TAAAAACATCCAATACTAGATA ATAC TATCTACCATTGGATGTTTTCA TCATTTTAATTCTTA TERM 1884 1809070 - 1809105 + r 89 -9.2 -4.42667 | opp_overlap 1809064 1809062 1809070, overlap 1809064 1809062 ACTAATATATAAAAA CATCCAATACTAGATA ATAC TATCTACCATTGGATG TTTTCATCATTTTAA TERM 1885 1809105 - 1809070 - R 100 -11.4 -5.10968 | opp_overlap 1809070 1809064 1809062, overlap 1809064 1809062 ACTAATATATAAAAA CATCCAATACTAGATA ATAC TATCTACCATTGGATG TTTTCATCATTTTAA rplI 1809573 - 1809124 - | 50S ribosomal protein L9P LSL_1728 1811620 - 1809587 - | phosphoesterase, DHH family protein TERM 1886 1811453 - 1811439 - G 78 -7.2 -4.42788 | TTTAATGTTATAAAA GACAAT CCT ATTGTC AATAAAATCAGCAGA TERM 1887 1812166 - 1812137 - g 71 -6.5 -4.21275 | overlap 1812139 TTAATTTAGCTAAAA CACCATTATCAGT TACA ACTGACGATGGTA GCAAATTTACTTCAA LSL_1729 1811803 - 1812570 + | hypothetical protein TERM 1888 1812619 - 1812585 - f 93 -10.2 -4.31895 | opp_overlap 1812585 ACATATATTAATAAA GCACTAATGAATTGAT AAA ATAGATTCATTAGTGC TTTTTATATTCAAAA TERM 1889 1812585 - 1812619 + F 100 -12.4 -5.0916 | opp_overlap 1812585 ACATATATTAATAAA GCACTAATGAATTGAT AAA ATAGATTCATTAGTGC TTTTTATATTCAAAA TERM 1890 1812686 - 1812664 - f 88 -7.1 -5.04601 | opp_overlap 1812664 TTTAGAAATCAAAAA GCCTTAGTT TTTAT AACTAAGAC TTAAATACTGATACC TERM 1891 1816586 - 1816605 + F 82 -9.4 -3.66803 | opp_overlap 1816585 1816584 TTCAGTCCTACAACC CTAAGAAG CAAG CTTCTTAG TTTGGGCTCTTCCCG TERM 1892 1817041 - 1817014 - f 70 -4.2 -5.00196 | overlap 1817009 1817015 1817018 TTTCAAAGAACAAAA TCATTTGATAAC TTTC GTTATCAATGGA GCCTAGCGGGATCGA TERM 1893 1817136 - 1817120 - f 83 -6.7 -4.77165 | overlap 1817115 1817128 GGCCCCATAAGAAAA TTATGAA ATT TTCATAA AAGAATGGGCCTAAA TERM 1894 1817317 - 1817336 + F 72 -9.2 -2.65808 | opp_overlap 1817308 1817305, overlap 1817314 1817314 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 1895 1818942 - 1818954 + F 76 -6.3 -4.67692 | overlap 1818949 AAGCCCTGCACATTT GTTTC ATC GAAAC TTTGTTTAGTTTTCA TERM 1896 1819190 - 1819168 - f 100 -11.4 -5.8187 | TATTTAATAAAAAAA CCTCATAGTC ATC AACTATGAGG AAAAAAGGAGTTTAA TERM 1897 1819422 - 1819401 - f 100 -9.5 -5.65927 | TATCCAAATAAAAAA CCTCCACAT TACA ATATGGAGG TAAAAGGAGTTAGTT LSL_1730 1819718 - 1820074 + | hypothetical protein TERM 1898 1820090 - 1820115 + F 90 -4.7 -5.7946 | TAATATACTTTCTAA CTGCTTTATCT TTTA AGATTCAGCAG TTTTTTTGTTGGAAA TERM 1899 1820353 - 1820337 - g 73 -3.7 -5.05782 | opp_overlap 1820337 1820338, overlap 1820338 ACTCATTGGAAAAAA GTAACAG CTC CTGTTAG TTTCCCAATCTTGAT LSL_1731 1820217 - 1821017 + | polysaccharide deacetylase LSL_1732 1821043 - 1821552 + | hypothetical protein TERM 1900 1821573 - 1821617 + T 100 -16.1 -4.47786 | opp_overlap 1821573 1821584 TTTTTAATATGACAA TTAGCGACAAATTCAAGCT ACCGAAA AACTTGAATTTGTCGCTAA TTTATTTCCATAATT TERM 1901 1821617 - 1821573 - T 100 -18.3 -3.52073 | opp_overlap 1821573, overlap 1821584 TTTTTAATATGACAA TTAGCGACAAATTCAAGCT ACCGAAA AACTTGAATTTGTCGCTAA TTTATTTCCATAATT LSL_1733 1822521 - 1821643 - | LysR family transcriptional regulator LSL_1734 1822630 - 1823652 + | hypothetical protein TERM 1902 1823679 - 1823702 + T 100 -12.6 -5.1861 | opp_overlap 1823679 ACACATAATAAAAAA GCATTATGAG AAAT CTCATAATGC TTTTTTCATACTAAA TERM 1903 1823702 - 1823679 - T 100 -12.6 -5.62045 | opp_overlap 1823679 ACACATAATAAAAAA GCATTATGAG AAAT CTCATAATGC TTTTTTCATACTAAA nupC 1824977 - 1823730 - | nucleoside transport protein TERM 1904 1825160 - 1825139 - R 74 -3.1 -5.37865 | opp_overlap 1825143 1825159, overlap 1825143 1825159 TTAATAATTAAAAAA TAAACTTAT CCAC ATAAGTATA TCTGAGATATTATAT TERM 1905 1825156 - 1825143 - R 70 -3.9 -5.12785 | opp_overlap 1825143, overlap 1825139 TAATTAAAAAATAAA CTTAT CCAC ATAAG TATATCTGAGATATT TERM 1906 1825194 - 1825219 + r 100 -12.7 -4.50583 | opp_overlap 1825194 TTATTCACAAAAAAA GTATCCATCGT ACTC GCGATGGATAC TTTTATAATGCTATT TERM 1907 1825219 - 1825194 - R 100 -12 -5.64274 | opp_overlap 1825194 TTATTCACAAAAAAA GTATCCATCG TACTCG CGATGGATAC TTTTATAATGCTATT yidC 1826069 - 1825230 - | 60 kDa inner membrane protein TERM 1908 1825318 - 1825338 + g 70 -6.9 -3.73647 | TCTTTTTCTTCACGT TCCTTTCTA ATT TTGAAAGGA TTATTGATAAGTAAC rnpA 1826432 - 1826091 - | ribonuclease P TERM 1909 1826490 - 1826469 - R 100 -8.7 -5.60689 | CTACATAAGAAAAAA GACCACTGA CGGT CCAGTGGCC TATGCAGACAATACT rpmH 1826624 - 1826490 - | 50S ribosomal protein L34P SEQUENCE gi|90962708|ref|NC_007930.1| Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence (length 242436) LSL_1739 1 - 765 + | replication protein TERM 1 799 - 774 - f 100 -7.6 -5.68438 | TGACTAAATAAAAAA GCCCCTTACC GACCAA AGTAAGGAGC CTAAAAACTGTATGT TERM 2 827 - 807 - f 71 -5.5 -4.64598 | TAAGGAGCCTAAAAA CTGTATG TGACCAG CATACAG TAAAATCTCAGTCAA LSL_1740 1051 - 2043 + | putative replication protein TERM 3 2070 - 2049 - f 86 -5.9 -5.41143 | GAGTTTCTAAAAAAA GAACCCGTA ATAA TACAGATTC TTACAAATGATTTTT TERM 4 2741 - 2731 - f 70 -4 -5.03405 | opp_overlap 2731 AACATCAGAGAAAAA GTAA TTT TTAC GTTGTTCAGTCAGAC TERM 5 4963 - 5009 + F 75 -8.3 -3.75153 | opp_overlap 4963 ATAGTAATAAAAAAA CCAATATACATCTTTGTAG AGACTACAA CAAAAAAGATGTATATTGG TTTAGCTTACCCAAG TERM 6 5009 - 4963 - f 100 -8.3 -5.85737 | opp_overlap 4963 ATAGTAATAAAAAAA CCAATATACATCTTTGTAG AGACTACAA CAAAAAAGATGTATATTGG TTTAGCTTACCCAAG TERM 7 5185 - 5165 - f 76 -8.5 -3.49738 | opp_overlap 5165 5167 AATATAATCAATTAA CATTATATA TAA TATATAATG TATTAACACAATGTT TERM 8 5165 - 5185 + F 72 -8.5 -3.03007 | opp_overlap 5165, overlap 5167 AATATAATCAATTAA CATTATATA TAA TATATAATG TATTAACACAATGTT LSL_1741 5306 - 6118 + | chromosome partitioning ATPase LSL_1742 6118 - 6453 + | hypothetical protein TERM 9 6462 - 6488 + F 100 -10.3 -5.05601 | opp_overlap 6462 AAAATAATGGCGAAA CAGAGGATAGT TTGAT ATTATCCTCTG TTTTTGTGTATAGTG TERM 10 6488 - 6462 - f 75 -8.1 -3.65722 | opp_overlap 6462 AAAATAATGGCGAAA CAGAGGATAGT TTGAT ATTATCCTCTG TTTTTGTGTATAGTG TERM 11 6796 - 6775 - f 74 -8.7 -3.29263 | overlap 6776 ATATTTGGGCGAGAA GCCAGTGGT TTTA ACCACTGGA GGAATAGCCCGCGAC TERM 12 6795 - 6776 - f 89 -12.2 -2.57344 | overlap 6775 TATTTGGGCGAGAAG CCAGTGGT TTTA ACCACTGG AGGAATAGCCCGCGA TERM 13 7248 - 7264 + G 74 -5.2 -4.72007 | AGTACGTGATCTAAC TTGGTT ACATA AACCAA TTTCTTTTAATCGCC TERM 14 7570 - 7581 + G 83 -5.8 -5.03314 | opp_overlap 7570 AGTTATGATGAACAA GGCA AAAC TGCC TTTTTTGACGGTCAA LSL_1743 6913 - 8130 + | IS607 family transposase TERM 15 8240 - 8259 + F 77 -10 -2.70932 | opp_overlap 8240 8239, overlap 8229 GTCGTGAGCTACAAG CCTCAGTC TTTA GACTGGGG TAGTTGACCCGACGA LSL_1744 8298 - 8630 + | hypothetical protein TERM 16 8732 - 8708 - T 91 -7.9 -5.16841 | opp_overlap 8708 8709, overlap 8709 TGAGAGTAAGAAAAA GGCTAGGAAAA TCA TTTTCCCAGCT CTTTTTTAATATAAA TERM 17 8708 - 8733 + T 80 -5.5 -5.22312 | gap 1, opp_overlap 8708 8709, overlap 8709 TGAGAGTAAGAAAAA G-GCTAGGAAAA TCA TTTTCCCAGCTC TTTTTTAATATAAAT TERM 18 8731 - 8709 - T 93 -11.4 -3.6902 | opp_overlap 8708 8709, overlap 8708 GAGAGTAAGAAAAAG GCTAGGAAAA TCA TTTTCCCAGC TCTTTTTTAATATAA TERM 19 8709 - 8731 + T 88 -9.2 -4.23988 | opp_overlap 8709 8708, overlap 8708 GAGAGTAAGAAAAAG GCTAGGAAAA TCA TTTTCCCAGC TCTTTTTTAATATAA pepN 11285 - 8751 - | aminopeptidase N TERM 20 11699 - 11716 + r 93 -6.3 -5.68039 | opp_overlap 11699 GAATTAATGGAAGAA GAGCTTT AGAT GAAGCTC TTTTTTTCTGCCTTT TERM 21 12064 - 12087 + r 93 -6.2 -5.60993 | gap 1, opp_overlap 12063 TTTATTCCTACGAAT GTTTGAGATAT GCG AT-TCTCAAAC TTTTTTTGTAAAAAA TERM 22 12134 - 12104 - R 76 -3.4 -5.40072 | overlap 12106 TTTTTTGTAAAAAAA TACCGATTAG AACTTCATAAA CTAATCGGCA TAAGTTAATTATTAG LSL_1746 12994 - 12146 - | oxidoreductase TERM 23 13091 - 13149 + r 100 -21.4 -2.50387 | opp_overlap 13110, overlap 13092 13099 13120 AAGAAAAACATCCTG ACTGTGAAGTGCCTTACAATCGTTAAAC TTT GTCTAACAATTGTAAGGCACTTCATAGA AATTATTTTCTAAGG TERM 24 13092 - 13150 + r 100 -12.9 -3.18115 | gap 2, opp_overlap 13110, overlap 13091 13099 13120 AGAAAAACATCCTGA --CTGTGAAGTGCCTTACAATCGTTAAAC TTT GTCTAACAATTGTAAGGCACTTCATAGAA ATTATTTTCTAAGGG TERM 25 13099 - 13141 + r 100 -18 -3.17486 | opp_overlap 13110, overlap 13091 13092 13120 CATCCTGACTGTGAA GTGCCTTACAATCGTTAAAC TTT GTCTAACAATTGTAAGGCAC TTCATAGAAATTATT LSL_1747 13828 - 13205 - | hypothetical protein adhC 14190 - 15311 + | Aryl-alcohol dehydrogenase TERM 26 15362 - 15318 - T 95 -10.3 -4.46073 | opp_overlap 15322, overlap 15322 GGTGAATAGAATAAA TGAAGTTCAGACTATTAAGAA TTA TTCCTAATAATCTGAACTTTT TTATATATAGCATAA TERM 27 15358 - 15322 - T 100 -15.5 -3.75295 | opp_overlap 15322, overlap 15318 AATAGAATAAATGAA GTTCAGACTATTAAGAA TTA TTCCTAATAATCTGAAC TTTTTTATATATAGC TERM 28 15322 - 15358 + T 100 -11.1 -5.4251 | opp_overlap 15322 15318 AATAGAATAAATGAA GTTCAGACTATTAAGAA TTA TTCCTAATAATCTGAAC TTTTTTATATATAGC TERM 29 15384 - 15413 + T 89 -8.6 -4.7173 | opp_overlap 15385, overlap 15385 ATAGCATAAAAATAA ACCTGATTTCGG AATTTA CCGAGATCAGGC TTTTTAGATATCATA TERM 30 15412 - 15385 - T 100 -9.9 -4.98911 | opp_overlap 15384 15385 TAGCATAAAAATAAA CCTGATTTCGG AATTTA CCGAGATCAGG CTTTTTAGATATCAT TERM 31 15385 - 15412 + T 91 -12.1 -3.42315 | opp_overlap 15385, overlap 15384 TAGCATAAAAATAAA CCTGATTTCGG AATTTA CCGAGATCAGG CTTTTTAGATATCAT LSL_1749 16067 - 15417 - | hypothetical protein LSL_1750 17089 - 16070 - | AraC family transcriptional regulator TERM 32 16163 - 16178 + g 72 -2.6 -5.31855 | overlap 16170 ATACTCTTCTTTGAA TTTCTT ATAA AAGGAA TTTTTATTATTGATA proP 17357 - 18616 + | L-rhamnose-proton symport rhaB 18637 - 20094 + | rhamnulokinase LSL_1753 20099 - 20425 + | hypothetical protein LSL_1754 20438 - 21703 + | L-rhamnose isomerase araD 21793 - 22608 + | rhamnulose-1-phosphate aldolase TERM 33 22621 - 22656 + T 95 -9.3 -5.13473 | gap 1, opp_overlap 22621 22620 22624 TAAGGATATAGAAAG TAAGGTATGATTCTAG AAAAG CTAGGA-CATACCTTA TTTTTTGGATATACT TERM 34 22895 - 22876 - T 86 -5.7 -5.39755 | TATAAGTACAAAAAA GCCCCAA AATGAA TTGAGGC TAAATGTAGTATTTA LSL_1756 24629 - 22914 - | hypothetical protein TERM 35 22995 - 22970 - G 84 -11.3 -3.14344 | opp_overlap 22964 22973, overlap 22973 TACTTTGTCCATTAA CAATGTTGGCT TTGA AACCAACATTG TCACCACTTCTAAGC TERM 36 22992 - 22973 - G 70 -7.2 -3.71848 | opp_overlap 22964 22973, overlap 22970 TTTGTCCATTAACAA TGTTGGCT TTGA AACCAACA TTGTCACCACTTCTA LSL_1757 25066 - 25950 + | hypothetical protein TERM 37 26005 - 25963 - T 74 -7.2 -4.00124 | opp_overlap 25973 25997, overlap 25965 25973 TAGTCTATAACTAAA TACAAAAAAATGGAAGGC GAAAACA GCCCTCCATTTCTTTAAA AAGAATTTTTAGTAA TERM 38 26003 - 25965 - T 82 -9.8 -3.5891 | opp_overlap 25973 25997, overlap 25963 25973 GTCTATAACTAAATA CAAAAAAATGGAAGGC GAAAACA GCCCTCCATTTCTTTA AAAAGAATTTTTAGT TERM 39 25995 - 25973 - T 100 -7 -5.88197 | opp_overlap 25973, overlap 25965 25963 CTAAATACAAAAAAA TGGAAGGC GAAAACA GCCCTCCA TTTCTTTAAAAAGAA xerC 27043 - 26117 - | DNA integration/recombination/inversion protein TERM 40 26374 - 26407 + g 86 -6.1 -5.54907 | AGTTGAAAATTTTTT GATCCTGATTAAC GAAAATAG GTTGATCGGGGTC TTTTTCTTTTATCAA TERM 41 26505 - 26527 + g 81 -7.8 -4.37337 | opp_overlap 26505 GGTTGAAAGCCATAA TCTTTGAACT TGT AGTTCCAAGA TTTATTAATGTTTAT LSL_1758b 27261 - 27818 + | hypothetical protein LSL_1758c 27820 - 29217 + | modification subunit LSL_1758d 29230 - 29481 + | hypothetical protein TERM 42 32386 - 32366 - f 70 -8.3 -3.06046 | opp_overlap 32365 32365, overlap 32365 32358 ATTATAATGATAAAT TCACCCATG CCA CATGGTTGA CATTTATGAAGAGTC LSL_1759 35658 - 38285 + | Type III restriction-modification system restriction subunit TERM 43 38367 - 38357 - f 81 -3.2 -5.86976 | opp_overlap 38363, overlap 38360 38361 38363 GGATAAAATAAAAAA GAAG TAG CTCC TATTCCTTATTTTTG TERM 44 38397 - 38360 - f 70 -4.1 -4.94109 | opp_overlap 38363, overlap 38357 38361 38363 TAAAATAAAAAAGAA GTAGCTCCTATTCCTTA TTTT TGAGGAGTAGGAGCTTT TTTATAGGGGAAGAT TERM 45 38396 - 38361 - f 71 -7.6 -3.52805 | opp_overlap 38363, overlap 38357 38360 38363 AAAATAAAAAAGAAG TAGCTCCTATTCCTTA TTTT TGAGGAGTAGGAGCTT TTTTATAGGGGAAGA TERM 46 38363 - 38394 + F 100 -14.6 -5.24129 | opp_overlap 38357 38363 38361 38360 AATAAAAAAGAAGTA GCTCCTATTCCTTA TTTT TGAGGAGTAGGAGC TTTTTTATAGGGGAA TERM 47 38394 - 38363 - f 82 -10.2 -3.2756 | opp_overlap 38363, overlap 38357 38361 38360 AATAAAAAAGAAGTA GCTCCTATTCCTTA TTTT TGAGGAGTAGGAGC TTTTTTATAGGGGAA LSL_1760 38418 - 41603 + | hypothetical protein TERM 48 41643 - 41663 + F 76 -6.1 -4.59853 | overlap 41646 TAATAGAATGGATAA GTGCTGGAC ATT GTTCAGTGC TTTTTCAAAACTTAA LSL_1761 41703 - 42041 + | hypothetical protein LSL_1762 42081 - 44138 + | hypothetical protein LSL_1763 44135 - 44698 + | hypothetical protein LSL_1764 44774 - 47551 + | ATPase of the AAA+ class LSL_1765 47582 - 48832 + | hypothetical protein LSL_1766 48966 - 49082 + | hypothetical protein TERM 49 49312 - 49353 + T 91 -7.5 -5.13344 | opp_overlap 49316, overlap 49316 CTTGTATAACAAAAC AAAATCCGTCCAATGAA CGCGAAAA TTCATTGAACGGATTTA TTTTTATATTAATCT TERM 50 49316 - 49349 + T 91 -8.3 -5.05037 | opp_overlap 49316, overlap 49312 TATAACAAAACAAAA TCCGTCCAATGAA CGCGAAAA TTCATTGAACGGA TTTATTTTTATATTA TERM 51 49349 - 49316 - T 100 -11.2 -5.31091 | opp_overlap 49312 49316 TATAACAAAACAAAA TCCGTCCAATGAAC GCGAAA ATTCATTGAACGGA TTTATTTTTATATTA potE 50761 - 49367 - | alanine permease ald 51904 - 50801 - | alanine dehydrogenase TERM 52 52161 - 52145 - R 79 -6.7 -4.60073 | opp_overlap 52144 52145 52147 TAGAGAATGAGAAAA TATACAT TAA ATGTATA ATTAGTTTGCGGTTA LSL_1769 53200 - 52433 - | hypothetical protein LSL_1770 53796 - 53287 - | hypothetical protein TERM 53 53865 - 53855 - H 77 -4 -5.5112 | opp_overlap 53855, overlap 53848 TTTATCAATAAAAAA CTTA TTA TAAG TTTTCCAAAAACCGT TERM 54 54395 - 54409 + G 72 -2.8 -5.37593 | GTTCAAGCTTATATC GATCAT TTG AAGATC TTTTTTAGTTTACAG LSL_1771 53945 - 54787 + | DegV family protein TERM 55 54811 - 54832 + F 95 -8.7 -5.27335 | opp_overlap 54811 TTTATTAATAAGAAT TCCTCATCC TTTT GGGTGGGGA TTTTTATTTGGAAAA wecD 54961 - 55395 + | acetyltransferase TERM 56 55504 - 55492 - g 74 -3.5 -5.32699 | GTAAATATGAAAAAA TTAAA GAA TTTAA CTCAATACAATTTTA LSL_1773 55468 - 56421 + | hypothetical protein TERM 57 56467 - 56440 - T 95 -11.4 -3.9467 | opp_overlap 56440 AAGGAGACACAAGAA GACCCTAACTCA ATTG CAAGTTAGGGTC TTTTAATTATCTGTT TERM 58 56440 - 56467 + T 93 -10 -4.55544 | opp_overlap 56440 AAGGAGACACAAGAA GACCCTAACT CAATTGCA AGTTAGGGTC TTTTAATTATCTGTT himA 56763 - 56488 - | DNA-binding protein HU TERM 59 61654 - 61688 + H 93 -6.7 -5.36441 | gap 1, opp_overlap 61654 ATAAGTAATAACGAA GTGTCATTTGAGAT ATGAGTGA ATCTC-AATGACAC TTTTTTGTGTGGGAA LSL_1775 62003 - 62206 + | hypothetical protein LSL_1776 62267 - 62521 + | hypothetical protein LSL_1777 62535 - 62702 + | hypothetical protein LSL_1778 62874 - 63569 + | hypothetical protein TERM 60 63591 - 63621 + T 100 -11.4 -5.53079 | opp_overlap 63591 ATAGATACGCAAAAA TCTCTAAATATACA ATG TGTATACTTAGAGA TTTTTTCTATATTTT TERM 61 63621 - 63591 - T 100 -13.6 -4.73448 | opp_overlap 63591 ATAGATACGCAAAAA TCTCTAAATATACA ATG TGTATACTTAGAGA TTTTTTCTATATTTT TERM 62 63711 - 63729 + T 100 -11.8 -5.38951 | TGGATAGCCTAAGCC TAGGACTC GTA GAGTCCTA TTTTTTATATGCATT LSL_1779 64158 - 63727 - | IS200/IS605 family transposase LSL_1780 64258 - 65535 + | IS200/IS605 family transposase TERM 63 65734 - 65773 + F 71 -2.2 -5.40072 | opp_overlap 65729 65748, overlap 65729 65735 GTTGACTAGAGAAGC CTGGCGTCTATTAAGAAA TACT TTTCTTGATGAGCGTCAA TTTTTTTAACGGAAA dps 65875 - 66447 + | non-specific DNA-binding protein / Iron-binding ferritin-like antioxidant protein / ferroxidase TERM 64 66471 - 66492 + F 100 -9.5 -4.91084 | TAGAAGCTGATTTAG GGATTGGAA TTCT TTCCAGTCC TTTTTCCATTTTCTT TERM 65 66506 - 66519 + F 81 -3.9 -5.67063 | CCTTTTTCCATTTTC TTGAT GTGC ATCAA TTTTTTTGTAGTAAG LSL_1782 66592 - 67296 + | Crp family transcriptional regulator TERM 66 67498 - 67528 + F 95 -9 -5.01042 | GTAAAATTTTATGCG GCCTAATTTCGGCA TTC TGCTGGAGTCAGGC TTTTTAGTTTCCATT TERM 67 68027 - 68062 + F 100 -12.8 -3.56273 | overlap 68032 ATTTCAGTACAGACC GAAAACCCGAAGAGAG TGCC TTCTTTTTGGGTTTTC TTATATAATCCTCGG TERM 68 68032 - 68057 + F 83 -6.9 -4.85918 | overlap 68027 AGTACAGACCGAAAA CCCGAAGAGAG TGCC TTCTTTTTGGG TTTTCTTATATAATC TERM 69 68443 - 68457 + F 78 -2.2 -5.75538 | TCCATTTTCCATGAA TAAAAG GAT TTTTTA TTTTTCTTTTTTCAA TERM 70 68605 - 68591 - f 82 -10 -3.21064 | overlap 68589 68587 GTTATAACGAAGATA GTAGCC CAC GGCTAC AATAATCACGTCCTG LSL_1784 68867 - 69100 + | hypothetical protein TERM 71 69118 - 69153 + T 100 -9.9 -5.46657 | opp_overlap 69122 GATTAAATAAACTAG GCAATTCTGGAAGAA AAGCTA TTTTTCCGGGATTGC TTTTTTGTTGCAATC LSL_1785 69281 - 69114 - | hypothetical protein zntA 69419 - 71323 + | lead, cadmium, zinc and mercury transporting ATPase LSL_1787 71563 - 71844 + | IS3 family transposase TERM 72 72535 - 72516 - g 74 -5.8 -4.46514 | gap 1, opp_overlap 72516 72518, overlap 72518 AGTTATTCAAAGAAA GC-TTATCC GTG GGATAATGC TTGTATTGAGTCTTT LSL_1788 71919 - 72746 + | IS3 family transposase TERM 73 72793 - 72847 + T 85 -10.3 -3.43689 | gap 1, opp_overlap 72793 AACAAAGGATTAGAA TCATTATTTTTGTCAAGGGT-TTCCC GTAT GGGCTTGCCCTTGATAGAAATAATGA TTCTAATAAAATTTT TERM 74 73049 - 73013 - T 100 -9.7 -6.14618 | opp_overlap 73013 GATAAAATAAAAAAA CAATAAGCAATTTTCGA ATA TTGAAAATCACTTATTG TTTTTCAGGAAGATA TERM 75 73013 - 73049 + T 82 -7.5 -4.57073 | opp_overlap 73013 GATAAAATAAAAAAA CAATAAGCAATTTTCGA ATA TTGAAAATCACTTATTG TTTTTCAGGAAGATA TERM 76 73164 - 73123 - T 80 -5.4 -5.16472 | gap 1, opp_overlap 73123 73125, overlap 73125 AAAAAGGCTAAAAAA TGCCACTAGATCAATAGTT TTGAT AACTAT-GATTTAGTGGTA TTTTTGTACTAATAA TERM 77 73123 - 73164 + T 100 -9.8 -4.93296 | gap 1, opp_overlap 73123 73125, overlap 73125 AAAAAGGCTAAAAAA TGCCACTAGATCAATAGTT TTGAT AACTAT-GATTTAGTGGTA TTTTTGTACTAATAA TERM 78 73125 - 73162 + T 90 -10.2 -4.08644 | gap 1, opp_overlap 73125 73123, overlap 73123 AAAGGCTAAAAAATG CCACTAGATCAATAGTT TTGAT AACTAT-GATTTAGTGG TATTTTTGTACTAAT LSL_1789 74384 - 73185 - | transport protein LSL_1790 74697 - 75917 + | transport protein TERM 79 75965 - 75923 - T 84 -5.2 -5.47821 | gap 1, opp_overlap 75926, overlap 75926 ATTCATCTAAAAAAA GAATCACTAGAA-CGAATT AATTAA AATTCAATTCTAGTGATTT TTATTATTTTCCAGC TERM 80 75962 - 75926 - T 83 -6.9 -4.8236 | gap 1, opp_overlap 75926, overlap 75923 CATCTAAAAAAAGAA TCACTAGAA-CGAATT AATTAA AATTCAATTCTAGTGA TTTTTATTATTTTCC TERM 81 75926 - 75962 + T 82 -4.7 -5.4593 | gap 1, opp_overlap 75926 75923 CATCTAAAAAAAGAA TCACTAGAA-CGAATT AATTAA AATTCAATTCTAGTGA TTTTTATTATTTTCC LSL_1791 76865 - 75969 - | LysR family transcriptional regulator LSL_1792 77024 - 77860 + | hypothetical protein kduD 77889 - 78716 + | 2-deoxy-D-gluconate 3-dehydrogenase sdhA 78736 - 80451 + | fumarate reductase flavoprotein subunit aroE 80472 - 81347 + | shikimate 5-dehydrogenase aroD 81360 - 82118 + | 3-dehydroquinate dehydratase TERM 82 82126 - 82153 + T 100 -12.2 -5.74122 | opp_overlap 82126 TTGACTAAGCAAAAA GAAGTTGAATCA AATT TGGTTCAACTTC TTTTTTTGTGTACTA TERM 83 82153 - 82126 - T 100 -10 -4.90266 | opp_overlap 82126 TTGACTAAGCAAAAA GAAGTTGAATCA AATT TGGTTCAACTTC TTTTTTTGTGTACTA xerS 83263 - 82166 - | site-specific tyrosine recombinase XerS TERM 84 83397 - 83422 + H 74 -6.3 -4.41047 | opp_overlap 83397 ATGGTAATGAAATGA GTCTTACTT AAGAGTAG AAGTAAGAC TTTTGATTAAGGAAT LSL_1798 83642 - 83899 + | hypothetical protein LSL_1799 83949 - 84182 + | hypothetical protein LSL_1800 84228 - 84452 + | hypothetical protein LSL_1801 84545 - 85495 + | choloylglycine hydrolase TERM 85 85505 - 85527 + T 88 -7 -5.14682 | opp_overlap 85505 85502 AATTAAGCAAAATAA CTGGTATCAT AGT AGGGTACCAG TTTTATTTATTGTGA TERM 86 85607 - 85591 - T 100 -9.5 -6.34616 | opp_overlap 85589 TTAAAACAAAAAAAA GCTGAAT TTA ATTCAGC CATTAAGTATTATTT LSL_1802 86414 - 85617 - | protein tyrosine phosphatase citB 87092 - 86487 - | two-component response regulator TERM 87 86815 - 86801 - G 79 -10 -3.2404 | opp_overlap 86800 86799 ATAAATATCCATTAA CCCTTG CTG CAAGGG CGTCTTTGAAATATT baeS 88204 - 87095 - | sensory transduction protein kinase LSL_1804b 88953 - 88204 - | ABC transporter, permease protein LSL_1805 89831 - 88956 - | ABC transporter, ATP-binding protein TERM 88 89166 - 89178 + g 71 -3.4 -5.13521 | opp_overlap 89166 CAACTCACTATTGAA GGTT ACTTG AACC TTTTTTAACTGCTTT TERM 89 90537 - 90527 - g 79 -5.4 -5.06414 | overlap 90531 CGTTTTGAAGAAAAA GGAT TAA ATCC AGAATTTAGAAAAAA rpiA 90068 - 90751 + | ribose-5-phosphate isomerase A rpe 90768 - 91415 + | ribulose-phosphate 3-epimerase TERM 90 91420 - 91453 + F 100 -12.7 -5.10968 | opp_overlap 91420 91418 91416 91425 TACGTAATTAATATA TAGAAGATACTACTG TGAT TAGTGGTATCTTCTA TTTTTATATATTGAT TERM 91 91453 - 91420 - f 78 -9.8 -3.19081 | opp_overlap 91420, overlap 91418 91416 91425 TACGTAATTAATATA TAGAAGATACTACT GTGATT AGTGGTATCTTCTA TTTTTATATATTGAT LSL_1808 91485 - 92000 + | hypothetical protein TERM 92 92211 - 92221 + T 86 -4 -5.8901 | opp_overlap 92211, overlap 92213 ATATTTTTTCAGAAA GTTA AAA TAAC TTTTTTATTTTATCT TERM 93 92328 - 92343 + T 90 -4.8 -5.85244 | AAAAGTTCTGAGTCA CAATAT TATA ATATTG TTTTTTGTTTTAATT TERM 94 93490 - 93472 - T 70 -8.2 -3.08642 | opp_overlap 93471 93484 93487, overlap 93484 93487 ATATCACTCATGTAA TTCCTCCT ATA AGAAGGAA CCTTTCCTTCTTATA TERM 95 93500 - 93484 - T 78 -9.5 -3.29461 | opp_overlap 93471 93484 93487, overlap 93472 93487 TAATTCCTCCTATAA GAAGGAA CCT TTCCTTC TTATAATAATAAAAA TERM 96 93484 - 93500 + T 80 -9.5 -3.44051 | opp_overlap 93472 93484 93487, overlap 93471 93487 TAATTCCTCCTATAA GAAGGAA CCT TTCCTTC TTATAATAATAAAAA LSL_1809 93815 - 93534 - | hypothetical protein TERM 97 93916 - 93884 - R 93 -10 -4.64861 | opp_overlap 93883 93884 93886 93894 TTTCGCCAAAATAAA CACCCCAAATTCTA GCGTT TAGATTTTGAGGTG CTTGCTAATTATTTT LSL_1810 94578 - 93925 - | hypothetical protein LSL_1811 95145 - 94591 - | hypothetical protein LSL_1812 96437 - 95157 - | hypothetical protein LSL_1813 98575 - 96647 - | putative conjugation-related ATPase TERM 98 97854 - 97841 - G 74 -2.4 -5.5112 | opp_overlap 97841 TCCAGTAACAAAAAA GAAC GATCTT GTTC GTTTTTCATCACGAT LSL_1814 99259 - 98594 - | hypothetical protein LSL_1815 99579 - 99265 - | hypothetical protein TERM 99 99682 - 99660 - R 76 -3.5 -5.4505 | TTCGCCAATAAAAAA GTCCAAATT ACATG AACTTGAAC TTTTATTAATCTATT LSL_1816 102005 - 99693 - | hypothetical protein TERM 100 100396 - 100407 + g 71 -3 -5.18726 | TTAGAGCCATCTTGA TGAT TTAA ATCA TTTTTATTGTCAGAA traG 104871 - 102007 - | conjugation-related ATPase TERM 101 104938 - 104905 - R 79 -6.9 -4.7078 | opp_overlap 104906, overlap 104906 TTAATTATGTAAAAA GTTAAACGTAGTACA AATT TGTACTAGGTTTAAT TTTTTAACCATTTAT TERM 102 104906 - 104937 + r 100 -10.4 -5.07107 | opp_overlap 104905 104906 TAATTATGTAAAAAG TTAAACGTAGTACA AATT TGTACTAGGTTTAA TTTTTTAACCATTTA TERM 103 104937 - 104906 - R 85 -10.4 -3.41745 | opp_overlap 104906, overlap 104905 TAATTATGTAAAAAG TTAAACGTAGTACA AATT TGTACTAGGTTTAA TTTTTTAACCATTTA LSL_1818 107351 - 104934 - | hypothetical protein TERM 104 106039 - 106049 + g 74 -6.8 -4.32571 | GTTGATCTTATCTCT GCAC TTT GTGC TTTAATTTTGTCTTG TERM 105 106349 - 106359 + g 73 -4 -5.13741 | CAATAGTTTTAAGTC TTTG ATT CAAA TTTTTCTTGAATTCG TERM 106 107483 - 107432 - R 71 -8.5 -2.93073 | gap 1, opp_overlap 107433 107447 107451, overlap 107447 TTTCGCCAATAAGTA TAAAAAGCAAAAAAATATCCCACA TTTTG TGTGGAATATTTTTTTACTA-TTA TTGATCTGGGAAGTT TERM 107 107469 - 107447 - R 100 -7.1 -5.85011 | opp_overlap 107433 107447 107451, overlap 107432 TAAAAAGCAAAAAAA TATCCCACA TTTTG TGTGGAATA TTTTTTTACTATTAT TERM 108 107447 - 107469 + r 87 -5.6 -5.6473 | opp_overlap 107447 107432, overlap 107433 107451 TAAAAAGCAAAAAAA TATCCCACAT TTT GTGTGGAATA TTTTTTTACTATTAT LSL_1819 107819 - 107481 - | hypothetical protein LSL_1820 108181 - 107894 - | hypothetical protein TERM 109 108075 - 108091 + g 73 -4.5 -4.87892 | TTGTCTTTTTCTTGT TTACGAA TTT TTTGTAA TTTCTTTTCTTCAGC TERM 110 108140 - 108153 + g 91 -5.3 -5.85011 | TGCAGCAACTTTCTC TTCTG CTGT CAGAA TTTTTTTAGTTTTTA clpA 110013 - 108193 - | ATP-dependent Clp protease LSL_1822 110443 - 110024 - | hypothetical protein LSL_1823 111172 - 110462 - | hypothetical protein TERM 111 111071 - 111091 + g 85 -10.5 -3.50853 | CTTACGCTCATTAGT TACGGCTTT AAA AAGGCCGTA TTCTCCTTGAACGAC TERM 112 111124 - 111112 - G 75 -4.9 -4.98255 | CTTGAACGACAAAAA GATAA TGA TTATC TGAATCTCTTAAATT topA 113430 - 111190 - | topoisomerase-like protein TERM 113 111963 - 111975 + g 86 -4.8 -5.64274 | CATAATTTCTTAATT TGGC ATAAA GCCA TTTTTTTGTAGGTAC TERM 114 112058 - 112095 + g 71 -3 -5.04987 | gap 1, overlap 112062 ACATCTTTTTCTTTC TT-AATTGCCGTAGGAT TATAT ATTTTACGGTAATTTAA TTTTTTAGGGATATT TERM 115 112460 - 112476 + g 75 -5.1 -4.85177 | overlap 112463 TTATCCTCAGTTCTA GGATATG AAA CATAACC TTTTTCATATAGTTT LSL_1825 114605 - 113442 - | hypothetical protein TERM 116 114716 - 114683 - R 100 -8.3 -5.34632 | opp_overlap 114685, overlap 114684 114685 114689 AATAAAACATAAAAA TTTAAACCTAGTACA AATT TGTACTAGGTTTATT TTTTTAATTAATATA TERM 117 114715 - 114684 - R 100 -11.8 -3.77119 | opp_overlap 114685, overlap 114683 114685 114689 ATAAAACATAAAAAT TTAAACCTAGTACA AATT TGTACTAGGTTTAT TTTTTTAATTAATAT TERM 118 114714 - 114685 - R 100 -15.3 -2.83831 | opp_overlap 114685, overlap 114684 114683 114689 TAAAACATAAAAATT TAAACCTAGTACA AATT TGTACTAGGTTTA TTTTTTTAATTAATA TERM 119 114685 - 114714 + r 100 -15.3 -5.65513 | opp_overlap 114684 114683 114685 114689 TAAAACATAAAAATT TAAACCTAGTACA AATT TGTACTAGGTTTA TTTTTTTAATTAATA TERM 120 114710 - 114689 - R 100 -11.7 -4.03989 | opp_overlap 114685, overlap 114685 114684 114683 ACATAAAAATTTAAA CCTAGTACA AATT TGTACTAGG TTTATTTTTTTAATT LSL_1826 118508 - 114819 - | hypothetical protein TERM 121 116420 - 116452 + gr 76 -6.3 -4.62002 | CTGAAAATTCTTTTT CCAAGCGAGCTAA TTTTTCT TTGGCACGTTTGG TTTTATATGATTCAT LSL_1827 118842 - 118441 - | hypothetical protein LSL_1828 119090 - 118842 - | hypothetical protein TERM 122 119135 - 119154 + r 91 -7.1 -5.27335 | GATTCGTGTTTATTT GGGTGGA TTAATT TCCGCCC TTTTTGTTTGCAACA TERM 123 119217 - 119177 - R 78 -5.7 -4.87892 | gap 1, opp_overlap 119177 TTGCAACAAAATAAA GTCAGACTCTGAATTTTA TAAACT CAAAATTG-GAGTCTGAC TTCTACTCTATTTGA LSL_1829 120433 - 119255 - | putative type II restriction enzyme TERM 124 119592 - 119604 + g 70 -4.1 -4.73105 | ATTGTAGCCGTATCT TGTCC AAA GGATA TTGTTTTTTCTGGAT TERM 125 119875 - 119861 - G 73 -8.6 -3.23219 | opp_overlap 119858, overlap 119859 AACATTTTTAGAATA TCTGAC TTC GTCAGA AACATTGATTTGGGA TERM 126 119976 - 119958 - G 77 -8.8 -3.59946 | opp_overlap 119969 GTGGCAATCAGATAA GCTTCCAG TTG CTGGAGGC GGTCAGCTTCCAGTT TERM 127 119969 - 119989 + g 77 -9 -3.58766 | opp_overlap 119958, overlap 119980 ATAAGCTTCCAGTTG CTGGAGGC GGTCA GCTTCCAG TTGTCTAATGTAATT LSL_1830 122510 - 120426 - | Type II restriction-modification system methylation subunit LSL_1831 123188 - 122787 - | hypothetical protein LSL_1832 123409 - 123188 - | hypothetical protein TERM 128 123532 - 123509 - H 93 -8.2 -5.2422 | opp_overlap 123504 123509 AATCATATCAAAAAA CATCCCATGA ATTT CCATGAGATG TTTTCTTTATATTTA TERM 129 123509 - 123532 + H 80 -5.3 -5.13648 | opp_overlap 123509, overlap 123504 AATCATATCAAAAAA CATCCCATG AATTTC CATGAGATG TTTTCTTTATATTTA LSL_1832c 126189 - 127001 + | hypothetical protein TERM 130 127038 - 127005 - f 85 -8.3 -4.7078 | opp_overlap 127007, overlap 127006 127007 127011 CTAATTAGTTAAAAA GTTAAACGTAGTACA AATT TGTACTACGTTTATT TTTTTAACTAATTGT TERM 131 127037 - 127006 - f 91 -11.8 -3.41745 | opp_overlap 127007, overlap 127005 127007 127011 TAATTAGTTAAAAAG TTAAACGTAGTACA AATT TGTACTACGTTTAT TTTTTTAACTAATTG TERM 132 127007 - 127036 + F 100 -15.3 -5.49729 | opp_overlap 127007 127006 127005 127011 AATTAGTTAAAAAGT TAAACGTAGTACA AATT TGTACTACGTTTA TTTTTTTAACTAATT TERM 133 127036 - 127007 - f 100 -15.3 -2.64324 | opp_overlap 127007, overlap 127006 127005 127011 AATTAGTTAAAAAGT TAAACGTAGTACA AATT TGTACTACGTTTA TTTTTTTAACTAATT TERM 134 127032 - 127011 - f 100 -11.7 -4.00407 | opp_overlap 127007, overlap 127007 127006 127005 AGTTAAAAAGTTAAA CGTAGTACA AATT TGTACTACG TTTATTTTTTTAACT TERM 135 127185 - 127207 + F 71 -9.2 -2.57067 | opp_overlap 127199, overlap 127199 127203 ACCAAACACGGATGG GTAACTGCAA CAA TTGCAGCTAC TGCCTTAGCTATTCC TERM 136 128792 - 128807 + F 74 -7.6 -3.94381 | TTGGGGGAATGTTGC TCCTGA TGGC TCAGGA TTTATGGGATTCTAT TERM 137 129738 - 129705 - g 89 -7.5 -5.34857 | TTAAATAAAAGAAAA GACCCTAACCAAC CTATTTTT GTTAGCCAGGGTC AAAAAATATTCAACT TERM 138 129776 - 129747 - g 81 -8 -4.14633 | overlap 129745 CAGGGTCAAAAAATA TTCAACTCTACT GTAAAT AGTAGAGTGGAA ACATTGTGTAAGCAT xerC 129066 - 129995 + | DNA integration/recombination/inversion protein TERM 139 130006 - 130031 + T 87 -7.7 -4.74787 | opp_overlap 130006 TATAATGACATTATA TCCTATATCTT TTTA GAGATATGGGA TTTATTTATCTTTCT LSL_1834 130789 - 130037 - | hypothetical protein TERM 140 130868 - 130835 - R 73 -7.5 -3.6471 | overlap 130840 CTCTAAATTATATAA CAAAACCCCAGACCT ACAA AAGTCCAGGGCTTTA TTTGCATTTGTTTTA TERM 141 130863 - 130840 - R 86 -7.4 -4.86822 | overlap 130835 AATTATATAACAAAA CCCCAGACCT ACAA AAGTCCAGGG CTTTATTTGCATTTG LSL_1835 132078 - 130948 - | transcriptional regulator LSL_1836 132721 - 132056 - | hypothetical protein TERM 142 132847 - 132814 - R 73 -7.5 -3.67546 | overlap 132819 AAAATTAAAGTATAA CAAAACCCCAGACCT ACAA AAGTCCAGGGCTTTA TTTACATTTGTTTAA TERM 143 132842 - 132819 - R 86 -7.4 -4.86902 | overlap 132814 TAAAGTATAACAAAA CCCCAGACCT ACAA AAGTCCAGGG CTTTATTTACATTTG LSL_1837 133208 - 132849 - | hypothetical protein lspD 134712 - 133231 - | surface protein TERM 144 134078 - 134103 + g 80 -4.7 -5.33026 | overlap 134074 134079 GCTAATTTAGCTTTC TCAGCTGAGAG ATTA TTTTCAGCTGC TTTTTGTTTAGCTTG TERM 145 134079 - 134102 + g 75 -8.2 -3.78189 | overlap 134074 134078 CTAATTTAGCTTTCT CAGCTGAGAG ATTA TTTTCAGCTG CTTTTTGTTTAGCTT LSL_1839 134987 - 135358 + | transcriptional regulator TERM 146 135403 - 135386 - T 100 -7.7 -5.79595 | GCTTAAAATAAAAAA GACGTGT AAGA ACACGCC ATAATAATTTAAACT TERM 147 135417 - 135444 + T 79 -4.9 -5.28755 | opp_overlap 135417 CCATAATAATTTAAA CTGTCCAACTG TCTGTT TAATTGGACAG TTTTTTACTATCTTT LSL_1840 136355 - 136215 - | hypothetical protein LSL_1841 136509 - 136348 - | hypothetical protein TERM 148 136601 - 136577 - R 100 -5.7 -5.94214 | AATAGAATAAAAAAA CACCCCACACA TTA CGTATGAGATG CTGTAAATATTACTT LSL_1842 136985 - 136611 - | hypothetical protein TERM 149 136734 - 136710 - GR 77 -8.7 -3.53343 | opp_overlap 136710 AAGTTTTTCCCTAAA TTCTTCAGATG CAC CATCCAAAGAA TAATTTTTATCTTCA LSL_1843 137593 - 136928 - | hypothetical protein LSL_1844 137973 - 137590 - | hypothetical protein TERM 150 138172 - 138132 - R 93 -8.5 -4.81551 | gap 1, opp_overlap 138132 TAGTTATATTAAAAA CCGCTAGGAATCAACGTT TTTAGT AACGT-GATTTCTAACGG TTTTTAAGTTTTGAG TERM 151 138132 - 138172 + r 93 -8.5 -4.87318 | gap 1, opp_overlap 138132 TAGTTATATTAAAAA CCGCTAGGAATCAACGTT TTTAGT AACGT-GATTTCTAACGG TTTTTAAGTTTTGAG TERM 152 138986 - 139002 + r 71 -2.3 -5.40014 | opp_overlap 138989, overlap 138987 TTTCTTTTAATTCAG ATATTTG ATC CAAATAA TTTTTATTCTTGTTT LSL_1845 140685 - 140263 - | hypothetical protein LSL_1846 141164 - 140682 - | hypothetical protein LSL_1847 141533 - 141177 - | hypothetical protein TERM 153 141764 - 141780 + r 71 -7.9 -3.51924 | opp_overlap 141745 141744, overlap 141765 ATCCGTAGGCGGATG AGCCGAC AGT GTCGGCA TTCTCTCAATGACCA TERM 154 141765 - 141779 + r 86 -11.4 -2.7094 | opp_overlap 141745 141744, overlap 141764 TCCGTAGGCGGATGA GCCGAC AGT GTCGGC ATTCTCTCAATGACC TERM 155 141936 - 141912 - R 71 -2.2 -5.40072 | gap 1, overlap 141893 141915 TTTTTTTCAAAAAAA TAA-CCATCAC ATTT GTGACGGCCTA ATTTTTTAATCTCTC TERM 156 141932 - 141915 - R 87 -7.7 -4.79949 | overlap 141912 TTTTCAAAAAAATAA CCATCAC ATTT GTGACGG CCTAATTTTTTAATC LSL_1848 142574 - 142260 - | hypothetical protein LSL_1849 143379 - 143083 - | hypothetical protein LSL_1850 143924 - 143412 - | hypothetical protein LSL_1851 144711 - 144031 - | hypothetical protein LSL_1852 145038 - 144823 - | hypothetical protein LSL_1853 145231 - 145031 - | hypothetical protein LSL_1854 146272 - 145271 - | hypothetical protein TERM 157 146102 - 146120 + g 77 -10.4 -2.52834 | overlap 146101 AAATCTACTTTTTGA TGGTACAA ATC TTGTACCA ATTAGTAATCCAATC LSL_1855 146763 - 146269 - | putative thioredoxin-like protein LSL_1856 146991 - 146776 - | hypothetical protein LSL_1857 147349 - 146942 - | hypothetical protein TERM 158 147154 - 147136 - GR 71 -6.8 -4.11371 | opp_overlap 147127, overlap 147137 GAATATTTCCTAAAA CTAAAGCA TTT TGCTTTAA GGAATTAGGTCTGAT TERM 159 147153 - 147137 - GR 70 -8.1 -3.06341 | opp_overlap 147127, overlap 147136 AATATTTCCTAAAAC TAAAGCA TTT TGCTTTA AGGAATTAGGTCTGA TERM 160 147714 - 147724 + r 84 -5.4 -5.4659 | CTTTGCTCTAACTTT TCTC GCA GAGA TTTTTCTTTCTCTTC TERM 161 147881 - 147900 + r 100 -9.4 -4.91084 | AATTTTCTGCTGGCT CTCAATCA ATTT TGATTGAG TTTTTGCATTTTCTT TERM 162 149066 - 149080 + r 72 -5.7 -4.49556 | opp_overlap 149055 AATTTTCCATCACCA CGGAA TCATT TTCCG TTTCTTTGCTAGAAC TERM 163 149640 - 149616 - R 74 -6.5 -4.42491 | overlap 149619 TAAAAAATAGATAAA TAATAGGCTTC GGT AAAGCCTATGA GAATGTTGAAATTGA TERM 164 149637 - 149619 - R 83 -8.2 -4.2572 | overlap 149616 AAAATAGATAAATAA TAGGCTTC GGT AAAGCCTA TGAGAATGTTGAAAT LSL_1858 150106 - 149960 - | hypothetical protein LSL_1860 150454 - 150296 - | hypothetical protein LSL_1859 150202 - 150354 + | hypothetical protein LSL_1861 150985 - 150785 - | putative phage-related DNA binding protein LSL_1862 151191 - 151613 + | hypothetical protein TERM 165 151622 - 151641 + T 88 -6.4 -5.39721 | TAATTAATTCTATAA CGTTCTAC ATTT GTAGGGCG TTTTTTATCTCCTCC TERM 166 151731 - 151764 + T 100 -8.3 -5.43974 | opp_overlap 151733, overlap 151732 151733 151737 AAAATTGGTTAAAAA AATAAACGTAGTACA AATT TGTACTACGTTTAAC TTTTTATTTAATTTT TERM 167 151732 - 151763 + T 100 -11.8 -3.82724 | opp_overlap 151733, overlap 151731 151733 151737 AAATTGGTTAAAAAA ATAAACGTAGTACA AATT TGTACTACGTTTAA CTTTTTATTTAATTT TERM 168 151733 - 151762 + T 100 -15.3 -2.87194 | opp_overlap 151733, overlap 151732 151731 151737 AATTGGTTAAAAAAA TAAACGTAGTACA AATT TGTACTACGTTTA ACTTTTTATTTAATT TERM 169 151762 - 151733 - T 100 -15.3 -5.41746 | opp_overlap 151732 151731 151733 151737 AATTGGTTAAAAAAA TAAACGTAGTACA AATT TGTACTACGTTTA ACTTTTTATTTAATT TERM 170 151737 - 151758 + T 100 -11.7 -4.06851 | opp_overlap 151733, overlap 151733 151732 151731 GGTTAAAAAAATAAA CGTAGTACA AATT TGTACTACG TTTAACTTTTTATTT TERM 171 152278 - 152314 + T 100 -16.1 -5.1101 | opp_overlap 152276 152278 AATTAGCACCGAAGA GAGCTACAAACGTTGAT TGT ATTGGCGTTTGTAGCTC TTTTTTGAATGATAA TERM 172 152314 - 152278 - T 76 -9.5 -3.1154 | opp_overlap 152278, overlap 152276 AATTAGCACCGAAGA GAGCTACAAACGTTGAT TGT ATTGGCGTTTGTAGCTC TTTTTTGAATGATAA LSL_2159 153105 - 152335 - | hypothetical protein TERM 173 153225 - 153200 - R 95 -10.5 -4.36931 | opp_overlap 153202 TAATGTATATGAAAA GAGCCAGGAAC TGCA ATTCCTGACTC TACTAGCGACCGCTT LSL_1863 153529 - 153299 - | hypothetical protein TERM 174 153700 - 153675 - R 95 -10.5 -4.36931 | opp_overlap 153677 TAATGTATATGAAAA GAGCCAGGAAC TGCA ATTCCTGACTC TACTAGCGACCGCTT LSL_1864 154022 - 153777 - | hypothetical protein TERM 175 154134 - 154149 + r 75 -2.6 -5.5208 | overlap 154136 AGCATAAAAAGTTAA TGGTTT TTGT AAACTA TTTTTTATGTTATAA TERM 176 154200 - 154177 - R 100 -14 -4.36931 | opp_overlap 154179 TAATGTATATGAAAA GAGCTAGGAA TAAA TTCCTAGCTC TGTAGCGACCGCTTA TERM 177 154179 - 154198 + r 83 -10.8 -2.87211 | opp_overlap 154177 ATGTATATGAAAAGA GCTAGGAA TAAA TTCCTAGC TCTGTAGCGACCGCT TERM 178 154255 - 154284 + r 84 -3.5 -5.86976 | opp_overlap 154255 ATTATATGAAATCAA CCGTCAATTCCCT ACCA AAGTCATTGACGG TTTTTTCTTTTGTCA LSL_1865 154523 - 154275 - | hypothetical protein LSL_1866 157306 - 154628 - | hypothetical protein TERM 179 157051 - 157039 - G 70 -4.1 -4.6971 | TAAACTCTAACAAAA TTCGC AAA GCAAA AATTAAAGAACCAGA TERM 180 157646 - 157674 + G 100 -11.2 -5.09521 | opp_overlap 157646 AATATTATTACAAAA TACCGAGAATCA AAAAC TGATTTTCGGTA TTTTTACTTTCTTAA TERM 181 157674 - 157646 - g 100 -9.7 -4.50583 | opp_overlap 157646 AATATTATTACAAAA TACCGAGAATCAA AAA CTGATTTTCGGTA TTTTTACTTTCTTAA LSL_1867 157427 - 157726 + | hypothetical protein LSL_1868 157852 - 159081 + | hypothetical protein LSL_1869 159101 - 159490 + | hypothetical protein TERM 182 159495 - 159514 + F 100 -8.6 -5.4505 | opp_overlap 159488 159495 TTGATAAATAAGTAA GTCCTAGA GCCG TCTAGGGC TTTTTTATTGCAAAA TERM 183 159554 - 159533 - f 82 -5.1 -5.44119 | opp_overlap 159535 159536, overlap 159536 TTTATTGCAAAAAAA TAACCTAGC TGCT GCTAGGCTT TACCGAATTGAAAGG TERM 184 159536 - 159551 + F 72 -9 -2.74322 | opp_overlap 159533 159536, overlap 159535 ATTGCAAAAAAATAA CCTAGC TGCT GCTAGG CTTTACCGAATTGAA TERM 185 159551 - 159536 - f 93 -9 -4.80853 | opp_overlap 159536 159535, overlap 159533 ATTGCAAAAAAATAA CCTAGC TGCT GCTAGG CTTTACCGAATTGAA TERM 186 159771 - 159781 + F 81 -4 -5.54907 | opp_overlap 159771 ATATTTTTTCAGAAA GTTA AAA TAAC TTTTTATTTTATCAA LSL_1870 160095 - 160397 + | hypothetical protein TERM 187 160488 - 160514 + F 100 -10.3 -5.8187 | opp_overlap 160491 AGATTTATCTGTCAA CAACCTCTATT TTGAT GATAGAGGTTG TTTTTTTGTTAAATA LSL_1871 160655 - 161533 + | hydrolase TERM 188 161592 - 161557 - T 100 -11.4 -5.46698 | gap 1, opp_overlap 161557 TTTAAAACCAAAAAA CATGGTATCTACTTAGC AAA ACTAAGC-GATACCATG TTTTTATTTTATATT TERM 189 161557 - 161592 + T 100 -8.5 -5.60556 | gap 1, opp_overlap 161557 TTTAAAACCAAAAAA CATGGTATCTACTTAG CAAAA CTAAGC-GATACCATG TTTTTATTTTATATT pflA 162455 - 161619 - | pyruvate formate-lyase activating enzyme pflD 164749 - 162482 - | formate acetyltransferase TERM 190 165088 - 165109 + r 100 -6.7 -6.55664 | opp_overlap 165088 ATTATTATTTTCAAA CTATTAGAT GAAA GTCTAATAG TTTTTTTTTGTTTTA LSL_1874 166411 - 165122 - | ISL3 family transposase TERM 191 165798 - 165808 + g 74 -5.4 -4.71584 | opp_overlap 165798 TATTGAATGAAATAA TTCC TAA GGAA TTTATTATTTCTTTC TERM 192 166148 - 166159 + g 70 -4.4 -4.77165 | opp_overlap 166148 166154, overlap 166153 166154 CTTGCATTCAGGACA CAGA TACT TCTG TTTTCTTATAGAAAG TERM 193 166326 - 166346 + g 81 -9.9 -3.38522 | overlap 166325 166330 TTAATAATTTTTTCT TCAATATAC GAA GTATATTGA TATTTAGGGTCAATA LSL_1875 167159 - 166575 - | hypothetical protein TERM 194 167355 - 167397 + r 90 -12.3 -3.14468 | opp_overlap 167360, overlap 167360 CTCTGTAAAATTTTC AAAAAGCGACTTTCATG TGAAATAGT CATGAAAGTCGCTTTTC TTGCATATAATCAAA TERM 195 167392 - 167360 - R 100 -12.2 -4.66264 | opp_overlap 167355 167360 TAAAATTTTCAAAAA GCGACTTTCATG TGAAATAGT CATGAAAGTCGC TTTTCTTGCATATAA TERM 196 167360 - 167392 + r 100 -12.2 -4.70169 | opp_overlap 167360, overlap 167355 TAAAATTTTCAAAAA GCGACTTTCATG TGAAATAGT CATGAAAGTCGC TTTTCTTGCATATAA TERM 197 167427 - 167415 - R 82 -6.3 -4.96646 | GCATATAATCAAAAA CAATC TAT GATTG AATGTGAAAAATAAT TERM 198 167720 - 167736 + r 74 -9.5 -2.57988 | overlap 167719 167717 TATTCGCTTAATTCT TTTGACC CAT GGTCAAA CTATTAGTTATCGTA TERM 199 169070 - 169034 - R 100 -8.3 -6.14618 | opp_overlap 169034 GATAAAATAAAAAAA CAATAAGCAATTTTC GGATATT GAAAATCACTTATTG TTTTTCAGGAAGATA TERM 200 169034 - 169070 + r 71 -5.3 -4.57073 | opp_overlap 169034 GATAAAATAAAAAAA CAATAAGCAATTTTCGG ATA TTGAAAATCACTTATTG TTTTTCAGGAAGATA sufB 170518 - 169115 - | ABC transporter-associated protein iscU 170960 - 170511 - | IscU protein LSL_1879 172186 - 170957 - | putative aminotransferase sufD 173420 - 172170 - | SufD protein TERM 201 173058 - 173074 + g 75 -5.1 -4.88129 | opp_overlap 173060, overlap 173060 TACATGCTCTGCTAA TAGACGA TTA TCGTCCA TTTTTAGTCCTTTTT LSL_1881 174212 - 173433 - | ABC transporter, ATP-binding protein TERM 202 173542 - 173513 - G 81 -10.1 -3.51232 | opp_overlap 173522, overlap 173509 173521 CTTTTTCCAAACGAA TTGCCAAATCTGG GCCA CCAGTTTTGACAA GTTGGCCATCCATCA TERM 203 174467 - 174442 - R 100 -12.7 -4.78752 | opp_overlap 174442 AGCACAACTTAAAAA CTCGCCTAGAA ATCA TTCTAGACGAG TTCTTACCTATTTAA TERM 204 174442 - 174467 + r 87 -10.5 -3.75657 | opp_overlap 174442 AGCACAACTTAAAAA CTCGCCTAGAA ATCA TTCTAGACGAG TTCTTACCTATTTAA LSL_1882 176109 - 174475 - | oligopeptide-binding protein oppA TERM 205 175404 - 175416 + g 85 -6.3 -5.252 | GATAGTTAATCTTTT GTAGT TTT ACTAC TTTTTTATCCCAATA TERM 206 176222 - 176187 - R 100 -11.4 -5.42975 | gap 1, opp_overlap 176186 CCAGATAAACAAAAA GGACTTGCAACTCCTAA AAA TTAGAA-TCGCAAGTCC AGTTATTATTATCTC TERM 207 176538 - 176509 - R 83 -5.9 -5.14563 | gap 1, opp_overlap 176508 176510 176514, overlap 176491 176512 TCTTTTAGTAAAAAA TA-ACATTCCCGTT AAC AACGCGAATGTCTA CATTTTTAATAATTG TERM 208 176534 - 176512 - R 90 -9.2 -4.67552 | opp_overlap 176510 176508 176514, overlap 176509 TTTAGTAAAAAATAA CATTCCCGTT AAC AACGCGAATG TCTACATTTTTAATA LSL_1883 177719 - 176562 - | hypothetical protein LSL_1884 178185 - 177913 - | hypothetical protein TERM 209 177976 - 177948 - G 100 -6.7 -6.28401 | opp_overlap 177949 177951 177960 177966, overlap 177951 177966 TAAAAAATAAAAAAA CAACATCCCCGTC AAC AACGAGGATGTCT TCGATTGTGGTATGT TERM 210 177973 - 177951 - G 100 -10.6 -5.04908 | opp_overlap 177951 177949 177960 177966, overlap 177948 177966 AAAATAAAAAAACAA CATCCCCGTC AAC AACGAGGATG TCTTCGATTGTGGTA TERM 211 178262 - 178236 - R 100 -11 -4.80882 | ATTTGATACCAAAAA TAGCCAACGCAA AAT TTGCATTGACTA AAAATTATGTAAACC LSL_1885 178766 - 178566 - | hypothetical protein TERM 212 178996 - 178975 - R 100 -9.5 -5.03314 | opp_overlap 178975 TTTACTGTTAAAAAA GACACCAGA TTTC TCTAGTGTC TTCATCAATTATTCA LSL_1886 180074 - 179025 - | hypothetical protein ldhD 180281 - 181276 + | D-lactate dehydrogenase TERM 213 181298 - 181320 + T 93 -6.3 -5.59534 | opp_overlap 181298, overlap 181289 TAATCCTAATAAAAA CCTCTGATA ATCCA TCTCAGAGG TTTTTTATTATACTT TERM 214 181320 - 181298 - T 82 -6.3 -5.10208 | opp_overlap 181289 181298 TAATCCTAATAAAAA CCTCTGATA ATCCA TCTCAGAGG TTTTTTATTATACTT mipB 182017 - 181337 - | fructose-6-phosphate aldolase LSL_1889 182464 - 182084 - | PTS system, glucitol/sorbitol-specific IIA component LSL_1890 183526 - 182501 - | PTS system, glucitol/sorbitol-specific IIBC component TERM 215 183427 - 183442 + g 80 -4.8 -5.29716 | TGTTACCACCTGTTA CATAAA CTAC TTTATG TTTTTCTTCTGTTGG LSL_1891 184085 - 183543 - | PTS system, glucitol/sorbitol-specific IIC2 component LSL_1892 184594 - 184097 - | sorbitol operon activator LSL_1893 186454 - 184595 - | sorbitol operon transcription regulator TERM 216 185311 - 185322 + g 84 -5.8 -5.30189 | CAACTTTATGATATT GAGG ATTC CCTC TTTTTTCATCTTCTA TERM 217 186274 - 186290 + g 83 -2.3 -5.8187 | CATAATCTTCGACTT TCAAATA ATA TTTTTGA TTTTTTTCTTGAATC LSL_1894 187273 - 186470 - | sorbitol-6-phosphate 2-dehydrogenase LSL_1895 188781 - 188605 - | hypothetical protein LSL_1896 189226 - 188834 - | hypothetical protein LSL_1897 189531 - 189328 - | hypothetical protein LSL_1898 190177 - 189521 - | hypothetical protein LSL_1899 190436 - 190296 - | hypothetical protein TERM 218 190436 - 190408 - G 100 -12.7 -5.61596 | opp_overlap 190400 190408 ATCTCTATAAAAAAA TTGTTAAGGACAA AAT TTATCCTTAACAA TTCTTCAATTTCAAT TERM 219 190408 - 190436 + g 87 -10.5 -3.78234 | opp_overlap 190408, overlap 190400 ATCTCTATAAAAAAA TTGTTAAGGACAA AAT TTATCCTTAACAA TTCTTCAATTTCAAT LSL_1900 191367 - 190471 - | dioxygenase/reductase TERM 220 191432 - 191399 - R 100 -12.7 -5.48213 | opp_overlap 191397 191393 TATTTAAAACAAAAA GGATATCTTACAACC ATAT AGTTATAAGATATCC CAATTGATATTAATG LSL_1901 194127 - 191470 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 221 195194 - 195232 + r 78 -9.1 -3.46138 | opp_overlap 195199, overlap 195199 GCTGATTAAGTTCAA AAAAACATCATCTCAAA TTAGC TCTGAGATGATGTTTTA TTCTAATCATAATTT TERM 222 195199 - 195227 + r 93 -9 -4.81814 | opp_overlap 195199, overlap 195194 TTAAGTTCAAAAAAA CATCATCTCAAA TTAGC TCTGAGATGATG TTTTATTCTAATCAT TERM 223 195227 - 195199 - R 100 -11.2 -5.47399 | opp_overlap 195199 195194 TTAAGTTCAAAAAAA CATCATCTCAAA TTAGC TCTGAGATGATG TTTTATTCTAATCAT LSL_1903 197205 - 195235 - | fructose-1,6-bisphosphatase TERM 224 195798 - 195810 + g 71 -6.3 -4.16681 | CATCTTTTACATTTG GCTTA GAG TAAGC TTTTCGAATCATCTT LSL_1905 197465 - 198286 + | hypothetical protein LSL_1906 198322 - 198588 + | hypothetical protein TERM 225 198654 - 198625 - T 100 -11.6 -5.30575 | opp_overlap 198625 GAAAAATTTAAAAAA TCGCCAAAGATT TGCACT AATCCTTGGCGA TTTTTACTTGGCGTA TERM 226 198625 - 198654 + T 100 -9.4 -4.87291 | opp_overlap 198625 GAAAAATTTAAAAAA TCGCCAAAGATT TGCACT AATCCTTGGCGA TTTTTACTTGGCGTA LSL_1907 199219 - 198695 - | hypothetical protein LSL_1908 199522 - 199292 - | hypothetical protein abpD 200792 - 199638 - | AbpD bacteriocin export accessory protein TERM 227 199932 - 199945 + g 79 -3.9 -5.54079 | TGTACTTACATATGC CTTTA CTTT TAAAG TTTTTTGATTTTTCA abpT 202968 - 200809 - | AbpT bacteriocin export accessory protein TERM 228 201612 - 201624 + g 71 -6.3 -4.24606 | GATTGTGAGCTACCC TTGCA CTC TGCAA TTTTGGCTGTAAATT TERM 229 203113 - 203083 - R 76 -5.5 -5.0133 | opp_overlap 203074 203072 203070 TATTTGGTTAAAAAA GAAGGCTGGAA TACTCTAAG TTCCAACCCTC TTTATTAACTATATT LSL_1911 203387 - 203118 - | hypothetical protein abpR 204189 - 203395 - | AbpR response regulator abpK 205492 - 204203 - | AbpK sensory transduction histidine kinase TERM 230 205395 - 205339 - G 100 -15 -4.34008 | gap 1, opp_overlap 205350, overlap 205340 205342 205344 205350 CATTAATTAAAAGAA TTAC-AGGAAAAGTAAGAAGTATAAAT AATA AATTATACTTCTTACTTTTCCTAGTAG GGGTCAAAAGATAAA TERM 231 205394 - 205340 - G 100 -18.5 -3.19321 | gap 1, opp_overlap 205350, overlap 205339 205342 205344 205350 ATTAATTAAAAGAAT TAC-AGGAAAAGTAAGAAGTATAAAT AATA AATTATACTTCTTACTTTTCCTAGTA GGGGTCAAAAGATAA TERM 232 205391 - 205342 - G 100 -19.1 -3.14372 | opp_overlap 205350, overlap 205340 205339 205344 205350 TAATTAAAAGAATTA CAGGAAAAGTAAGAAGTATAAAT AATA AATTATACTTCTTACTTTTCCTA GTAGGGGTCAAAAGA TERM 233 205389 - 205344 - G 100 -19.5 -3.11158 | opp_overlap 205350, overlap 205342 205340 205339 205350 ATTAAAAGAATTACA GGAAAAGTAAGAAGTATAAAT AATA AATTATACTTCTTACTTTTCC TAGTAGGGGTCAAAA TERM 234 205350 - 205383 + g 100 -11.3 -4.30576 | opp_overlap 205344 205342 205340 205339 205350 AGAATTACAGGAAAA GTAAGAAGTATAAAT AATA AATTATACTTCTTAC TTTTCCTAGTAGGGG TERM 235 205383 - 205350 - G 100 -11.3 -4.39889 | opp_overlap 205350, overlap 205344 205342 205340 205339 AGAATTACAGGAAAA GTAAGAAGTATAAAT AATA AATTATACTTCTTAC TTTTCCTAGTAGGGG abpIP 205608 - 205492 - | AbpIP induction peptide abpIM 205895 - 205728 - | AbpIM bacteriocin immunity protein TERM 236 205988 - 205943 - R 100 -10.1 -5.16681 | gap 1 TTAAAAATAATAAAA GTAGTGTCAAAT-TTAGCTATA TAC TATAACTTACACTTGACACTAC TTGAAGAAAAATAGA abp118b 206244 - 206038 - | Abp118 bacteriocin beta peptide abp118a 206456 - 206262 - | Abp118 bacteriocin alpha peptide LSL_1918 206719 - 206462 - | bacteriocin-like prepeptide LSL_1919 206824 - 206985 + | hypothetical protein LSL_1920 207280 - 207128 - | bacteriocin-like prepeptide LSL_1921 207577 - 207404 - | nonfunctional salvaricin B precursor LSL_1922 207809 - 208072 + | hypothetical protein TERM 237 208113 - 208076 - T 100 -16.6 -3.98627 | opp_overlap 208076 208079, overlap 208079 TCAGGAAGATAACAA TAAGCCTATCAGGTAT CAAATT ACACCTGATAGGCTTA TTTATTAACATATGT TERM 238 208076 - 208113 + T 100 -14.4 -4.2008 | opp_overlap 208076 208079, overlap 208079 TCAGGAAGATAACAA TAAGCCTATCAGGTAT CAAATT ACACCTGATAGGCTTA TTTATTAACATATGT TERM 239 208110 - 208079 - T 100 -13.9 -4.10144 | opp_overlap 208079 208076, overlap 208076 GGAAGATAACAATAA GCCTATCAGGTAT CAAATT ACACCTGATAGGC TTATTTATTAACATA TERM 240 208079 - 208110 + T 100 -11.7 -4.21438 | opp_overlap 208076 208079, overlap 208076 GGAAGATAACAATAA GCCTATCAGGTAT CAAATT ACACCTGATAGGC TTATTTATTAACATA LSL_1923 208236 - 208111 - | hypothetical protein LSL_1924 208361 - 209329 + | hypothetical protein LSL_1925 209865 - 209512 - | hypothetical protein LSL_1926 210143 - 209874 - | hypothetical protein TERM 241 209949 - 209965 + g 73 -3.8 -5.13722 | opp_overlap 209949 CAACAATGCTATTAA TACTAT CGTAT ATAGTA TTTTATTTTCATAGC TERM 242 210294 - 210264 - R 72 -2.7 -5.44119 | gap 1, overlap 210266 TGTACGTTAAAAAAA TAGCGACAAAAACA TCGC TGTCTT-GCCACTA TTCCCAACTATTTAA avtA 211480 - 210302 - | transaminase LSL_1928 212283 - 211498 - | carbon-nitrogen hydrolase family protein TERM 243 212388 - 212419 + r 74 -9 -3.09415 | opp_overlap 212388, overlap 212386 212391 TTTTTAAATAAAAAA TAAGGATTAAGA CCAGCTCA TCTTAATCCTTA TCTCTATCATTTATC TERM 244 212419 - 212388 - R 100 -9.7 -5.63517 | opp_overlap 212386 212388 212391 TTTTTAAATAAAAAA TAAGGATTAAGAC CAGCTC ATCTTAATCCTTA TCTCTATCATTTATC LSL_1929 212926 - 212426 - | hypothetical protein LSL_1930 213258 - 212944 - | hypothetical protein sdaA 214156 - 213275 - | L-serine dehydratase alpha subunit sdaB 214831 - 214169 - | L-serine dehydratase beta subunit LSL_1933 217380 - 215944 - | hypothetical protein TERM 245 216875 - 216897 + g 72 -9.2 -2.60808 | opp_overlap 216874 216875, overlap 216880 CCTACAGCTCTAAAC GTTGATAGAG AAG CTCTATCATC TGGATTATCACTGAT TERM 246 216897 - 216875 - G 72 -9.2 -2.75343 | opp_overlap 216875 216880, overlap 216874 CCTACAGCTCTAAAC GTTGATAGAG AAG CTCTATCATC TGGATTATCACTGAT TERM 247 217454 - 217411 - R 72 -5 -4.87786 | gap 1, overlap 217447 TGAATGTTATAAAAA TAAGAGAATTAATTTCTTA ACTATAA TAAG-AACTAATTCTCCTA AGAAATTACATTAAA LSL_1934 218587 - 217472 - | putative oxidoreductase LSL_1935 218978 - 219427 + | hypothetical protein TERM 248 219440 - 219488 + T 90 -9.1 -4.59982 | opp_overlap 219443 219447, overlap 219442 219443 219447 TAATATTTGTAAAAT AAAGAAAGCTAAGAATCACGTTA AAT TAGTGTAATTCTTAGCTTTCATC TTTATTTACTTCTAA TERM 249 219442 - 219486 + T 100 -11.7 -3.89787 | opp_overlap 219443 219447, overlap 219440 219443 219447 ATATTTGTAAAATAA AGAAAGCTAAGAATCACGTTA AAT TAGTGTAATTCTTAGCTTTCA TCTTTATTTACTTCT TERM 250 219485 - 219443 - T 100 -13 -4.65933 | opp_overlap 219442 219440 219443 219447, overlap 219447 TATTTGTAAAATAAA GAAAGCTAAGAATCACGTTA AAT TAGTGTAATTCTTAGCTTTC ATCTTTATTTACTTC TERM 251 219443 - 219485 + T 100 -15.2 -2.92246 | opp_overlap 219443 219447, overlap 219442 219440 219447 TATTTGTAAAATAAA GAAAGCTAAGAATCACGTTA AAT TAGTGTAATTCTTAGCTTTC ATCTTTATTTACTTC TERM 252 219447 - 219481 + T 90 -10.2 -4.10269 | opp_overlap 219447 219443, overlap 219443 219442 219440 TGTAAAATAAAGAAA GCTAAGAATCACGTTA AAT TAGTGTAATTCTTAGC TTTCATCTTTATTTA TERM 253 219481 - 219447 - T 90 -8 -4.8743 | opp_overlap 219443 219442 219440 219447, overlap 219443 TGTAAAATAAAGAAA GCTAAGAATCACGTTA AAT TAGTGTAATTCTTAGC TTTCATCTTTATTTA ndk 219937 - 219500 - | nucleoside diphosphate kinase nagC 220885 - 220022 - | glucokinase TERM 254 221314 - 221289 - g 80 -2.7 -5.64321 | gap 1, overlap 221283 221291 221299 AGAAGAAAAGAAAAA TATCTTCA-AAG TTG CTTATGAAGAAA CTGCTGGTAAGGCAC nanA 221116 - 221988 + | N-acetylneuraminate lyase nanE 222008 - 222697 + | N-acetylmannosamine-6-phosphate 2-epimerase TERM 255 222872 - 222901 + G 93 -11.5 -3.92373 | opp_overlap 222872 AAATTAGCTAAAAAA GCGGGTGTTAGTA ATGC TACTATCACTCGC TTTGTGCGTAGAATG TERM 256 222901 - 222872 - g 100 -9.3 -5.13521 | opp_overlap 222872 AAATTAGCTAAAAAA GCGGGTGTTAGTA ATGC TACTATCACTCGC TTTGTGCGTAGAATG LSL_1940 222743 - 223567 + | RpiR family transcriptional regulator TERM 257 223575 - 223600 + F 100 -10.5 -5.00616 | opp_overlap 223574 CTAAATAAAAATAGG CACCAATTGAG TTTT CTCGGTTGGTG TTTTTTGAAAGAAGG LSL_1941 223624 - 224241 + | hypothetical protein TERM 258 224319 - 224337 + F 71 -3.2 -5.20534 | GATATTAAATCAATC GATTATTA AAT TAATCATC TTTTTCTTAATTACT potE 224414 - 225901 + | amino acid permease TERM 259 225908 - 225898 - T 72 -2.6 -5.40014 | AAATAAGAATAAAAA TTAA ATT TTAA AGCCCTAGTTAGTTG TERM 260 225949 - 225910 - T 95 -12.4 -3.74781 | gap 1, opp_overlap 225910 AAATTAAATTTTAAA GCCCTAGTTAGTTGCGATA ATT TATCGGA-CTAACTAAGGC TTTTTCTTATTTATT TERM 261 225910 - 225949 + T 100 -12.4 -5.44198 | gap 1, opp_overlap 225910 AAATTAAATTTTAAA GCCCTAGTTAGTTGCGATA ATT TATCG-GACTAACTAAGGC TTTTTCTTATTTATT LSL_1943 226072 - 225956 - | hypothetical protein rpsN 226352 - 226083 - | SSU ribosomal protein S14P TERM 262 227005 - 227015 + G 73 -4 -5.08601 | opp_overlap 227005 AGTGAATTAGATGAA TCAA TTA TTGA TTTTTCTTCCGATAA fusA 226555 - 228474 + | tetracycline resistance protein TERM 263 228536 - 228580 + T 95 -11.7 -3.76373 | gap 1, opp_overlap 228538, overlap 228538 AATAGTTATATTAAA AACCGCTAGGAATCAACGTT TTTAGT AACGT-GATTTCTAGCGGTC TTTGAGTCTTGGGAC TERM 264 228538 - 228578 + T 100 -14.3 -3.4647 | gap 1, opp_overlap 228538, overlap 228536 TAGTTATATTAAAAA CCGCTAGGAATCAACGTT TTTAGT AACGT-GATTTCTAGCGG TCTTTGAGTCTTGGG TERM 265 228578 - 228538 - T 100 -12.1 -4.81551 | gap 1, opp_overlap 228536 228538 TAGTTATATTAAAAA CCGCTAGGAATCAACGTT TTTAGT AACGT-GATTTCTAGCGG TCTTTGAGTCTTGGG tktA 230622 - 228631 - | transketolase mipB 231293 - 230640 - | putative translaldolase TERM 266 231434 - 231406 - R 88 -6.2 -5.38047 | opp_overlap 231406 TATCTATATAAAAAA GAGATTAGTT TTATACATC AACTAATCTC TTCCTATATCCCATT rpe 232377 - 231730 - | ribulose-phosphate 3-epimerase LSL_1949 233223 - 232393 - | PTS system, mannose-specific IID component LSL_1950 233987 - 233223 - | PTS system, mannose-specific IIC component LSL_1951 234481 - 234005 - | PTS system, mannose-specific IIAB component manX 234941 - 234495 - | PTS system, mannose-specific IIAB component tdh 236028 - 234955 - | ribitol-5-phosphate 2-dehydrogenase LSL_1955 236246 - 237001 + | DeoR family transcriptional regulator TERM 267 237007 - 237029 + F 100 -9.3 -6.40073 | opp_overlap 237007 ACATTCCTAAAAAAA GAAGTCAAT TATTT ATTGACTTC TTTTTTTTTTACGTT TERM 268 237029 - 237007 - f 100 -9.3 -5.42862 | opp_overlap 237007 ACATTCCTAAAAAAA GAAGTCAAT TATTT ATTGACTTC TTTTTTTTTTACGTT TERM 269 238839 - 238825 - g 70 -3.6 -4.99043 | overlap 238836 TCCTTACAAACAAAA CAAGTT ATT AACTTA ATTGTTGCAAGTAAG LSL_1956 237097 - 239463 + | putative phosphoketolase TERM 270 239543 - 239510 - T 95 -12.6 -3.65722 | opp_overlap 239512 239516, overlap 239512 239516 AAAACAACTCCTAAA GATAAAGCCGATGC AATTAA GCATCGGCTTTATT GGTATATTATACATT TERM 271 239541 - 239512 - T 100 -15.2 -3.39429 | opp_overlap 239512 239516, overlap 239510 239516 AACAACTCCTAAAGA TAAAGCCGATGC AATTAA GCATCGGCTTTA TTGGTATATTATACA TERM 272 239512 - 239541 + T 100 -15.2 -3.40191 | opp_overlap 239512 239510 239516, overlap 239516 AACAACTCCTAAAGA TAAAGCCGATGC AATTAA GCATCGGCTTTA TTGGTATATTATACA TERM 273 239537 - 239516 - T 100 -11.6 -4.33258 | opp_overlap 239512 239516, overlap 239512 239510 ACTCCTAAAGATAAA GCCGATGC AATTAA GCATCGGC TTTATTGGTATATTA TERM 274 239516 - 239537 + T 100 -11.6 -4.329 | opp_overlap 239516 239512 239510, overlap 239512 ACTCCTAAAGATAAA GCCGATGC AATTAA GCATCGGC TTTATTGGTATATTA TERM 275 239758 - 239786 + T 100 -11.8 -5.92399 | opp_overlap 239756 239758 TTTAAGCAGCTAAGA CATGGGTTCGGT AATCA ACCGGACTCATG TTTTTTGTTTTATTG LSL_1957 240640 - 239744 - | IS1223 family transposase LSL_1958 241161 - 240643 - | IS1223 family transposase TERM 276 241213 - 241171 - R 100 -12.2 -5.22312 | opp_overlap 241192, overlap 241174 AGTCATATGAAAAAA GCACCTCACAATCGCTAAAC TTT GTCTAACAATTGTAAGGCAC TTCAACCTGGATAAG TERM 277 241210 - 241174 - R 91 -12.5 -3.43308 | opp_overlap 241192, overlap 241171 CATATGAAAAAAGCA CCTCACAATCGCTAAAC TTT GTCTAACAATTGTAAGG CACTTCAACCTGGAT LSL_1959 241619 - 241215 - | hypothetical protein