TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.306055 %AT, 4405945 nt, 30906 terms. Intergenic: 0.354305 %AT, H2T: 345144 nt, 2817 terms; T2T: 93085 nt, 1582 terms; H2H: 134232 nt, 2465 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|171056692|ref|NC_010524.1| Leptothrix cholodnii SP-6, complete genome (length 4909403) Lcho_0001 72 - 1604 + | chromosomal replication initiator protein DnaA Lcho_0002 1718 - 2863 + | DNA polymerase III, beta subunit TERM 1 2887 - 2916 + F 81 -7.7 -4.56597 | opp_overlap 2894, overlap 2889 CCCAGCTTCATCTCA CACACAAGCGGGC ACGG GCCCGCTTCCGCG TTTTTACAAGGGCCC TERM 2 2909 - 2894 - f 77 -11.8 -3.59698 | opp_overlap 2889 2887 TCATCTCACACACAA GCGGGC ACGG GCCCGC TTCCGCGTTTTTACA Lcho_0003 2965 - 5559 + | DNA gyrase, B subunit Lcho_0004 5756 - 6268 + | hypothetical protein Lcho_0005 7186 - 6287 - | LysR family transcriptional regulator Lcho_0006 7544 - 7230 - | hypothetical protein Lcho_0007 8796 - 7594 - | putative PAS/PAC sensor protein TERM 3 9617 - 9564 - g 80 -17.1 -3.14132 | CCGGTGCGTCACGAA GGCGCGCTGGTCGCGGCGGTGCAGG CCTT CCAGCGCCGCCACGGCCTGGGCGAC GACGGCGTCGTCGGC TERM 4 10061 - 10032 - g 73 -15 -3.14132 | GGCTTCGGCGACGAA CAGCTCGACGCG GTGCTG CGCGGCGAGCTG CGCATCCGCCAGCGG Lcho_0008 8901 - 10451 + | peptidoglycan binding domain-containing protein TERM 5 10965 - 10917 - g 82 -13.8 -3.7732 | gap 1, overlap 10920 CCCCGAGACCAACAA CACGCTGCGCCTGAC-CCGCGGC GGCG GCGGCGTCGCCAAGCGCAGCCTG CACATGGACGGCCGC Lcho_0009 10501 - 11118 + | hypothetical protein Lcho_0010 11866 - 11180 - | hypothetical protein TERM 6 11208 - 11246 + g 80 -11.5 -4.08216 | CGGACCAGCTCGATG CGCCGCCGCAGGCGCTG TGCCT CGGCGCTGTCGCCGGCG TTTTCGGCCCGCTGC Lcho_0011 12906 - 11932 - | hypothetical protein Lcho_0012 13661 - 12912 - | ABC-type transport system ipermease component Lcho_0013 14801 - 13710 - | hypothetical protein TERM 7 14280 - 14259 - G 70 -10.1 -3.82084 | GCGGAACAGGAAGAA CGACGTCAC CAGC GCGACGCCG AACAGCAGCGCGTTG TERM 8 14735 - 14764 + g 73 -9.9 -3.91716 | opp_overlap 14701 14715 CGAGCAGGCCGGCCA CCACGGTGCGGTG CAGC CAGCGCGGCGTGG TTCTTTCGGGCATCG Lcho_0014 15178 - 14798 - | MazG nucleotide pyrophosphohydrolase Lcho_0015 16038 - 15175 - | 2OG-Fe(II) oxygenase TERM 9 16333 - 16351 + H 72 -13.1 -3.05384 | ACCGGCCGGCTGCCC CCGCGGC ACGGC GCCGCGG TTGCGTGCGCGCGAC TERM 10 16745 - 16772 + GH 74 -10.5 -3.71848 | CGAGCAGGTGGCGCG GCCGCAGTGGC AGCGCG GCTACCGCGGC TTCTTCCTGGACACG TERM 11 17531 - 17477 - gH 72 -12.7 -3.16564 | gap 1 CGCCGAGGGCATCAA GGTCGTCAGCCTGGGCCAGCCCGGCG TGGG CAGCGGCCCGGCACTGGCCGA-GACC TTCGGCCTGCAGACC TERM 12 18428 - 18371 - gH 82 -15.5 -3.14344 | gap 1 CATCGGCTCGATCAA CGGCGGCGAGACGCTGATCA-CGCGGGC CCA GCCCTCGCTGACCAAGGTGGCACCGCCG GGGGTGCGCAAGGGC Lcho_0016 16419 - 19187 + | polysaccharide deacetylase TERM 13 21165 - 21135 - gf 71 -13.3 -3.01712 | gap 1 GGCCCGTGGTGAACA CGC-CGCCGCACGC CTGG ACATGCGGCGCGCG CTGGTCGCCGAGCCG TERM 14 22371 - 22337 - gf 77 -8.5 -4.20783 | gap 2, overlap 22323 22338 AGCCGACCGAAGAAA GCAGCG-CGCTCG-CGG TGG CCGGCGTGCGCCACCGC CTGCTGCTGGCGGTC TERM 15 22604 - 22634 + GF 71 -6.1 -4.24342 | gap 2, overlap 22605 CCGCCACCGCCCGGC TCGACCCGTCGGGCA GCG TGCCCG--GGGCCGG TTTCTTCATGCCCGC TERM 16 22700 - 22725 + GF 75 -11.8 -3.54424 | overlap 22701 GGGTGGCGCTGCGCG AGGCCGCCAG CCGCGC CTGGCGGCCG TTTGCCGACCTGCGC TERM 17 22701 - 22724 + GF 75 -15.3 -2.72511 | overlap 22700 GGTGGCGCTGCGCGA GGCCGCCAG CCGCGC CTGGCGGCC GTTTGCCGACCTGCG Lcho_0017 19153 - 22902 + | TPR repeat-containing protein Lcho_0018 22955 - 23473 + | putative lipoprotein TERM 18 24815 - 24770 - g 79 -17.5 -3.01712 | gap 1 TGGCCGGCCTGAACA TCGGCGTGCGGGTGCTCA-CGC TCG GCGGCGAGCGCCCGCTCGGCGA GGCGCTGCGGCTGCT Lcho_0019 23470 - 24855 + | putative transmembrane protein Lcho_0020 24852 - 25925 + | hypothetical protein TERM 19 26251 - 26212 - g 79 -15.6 -3.28712 | CGCCGCGTTCGAGAA GGTGCGCTGCCTGCACCA GCAC TGGCGCGCGCCGCGCACC GCCGACGAAGGTGCC Lcho_0021 25922 - 27445 + | glycosyl transferase group 1 Lcho_0022 27524 - 28894 + | putative transmembrane protein Lcho_0023 28902 - 29813 + | NADP oxidoreductase coenzyme F420-dependent Lcho_0024 30430 - 29798 - | DNA polymerase III, epsilon subunit TERM 20 29968 - 29993 + g 75 -12.5 -3.61398 | gap 1, opp_overlap 29949 29967 CGGTGGTCAATGCAT CGGCCAGCGCGC GGT GGGCGC-GGCCG TTGTTCGGCAGGCCG Lcho_0025 31902 - 30457 - | transcriptional regulator TERM 21 31575 - 31537 - G 79 -14.4 -3.59979 | overlap 31538 TGCGCCGATGCGAAA GGCCTGCGCCGGCTGCAG CGG CGGCTGCCAGCGCAAGGC GGTGTCGGCGATCAG TERM 22 32259 - 32314 + G 87 -20.4 -3.05384 | gap 1 TCGCCGTGATGGCGC GCAACGCCGCCGGCCGCAGCGCGATCA CGC TCATCACGCTGAGGCCGGCGGTGC-GC TTCGGTGGCGAACGC Lcho_0026 31970 - 32434 + | OsmC family protein Lcho_0027 32460 - 33089 + | FMN-binding negative transcriptional regulator Lcho_0028 33103 - 33546 + | GCN5-related N-acetyltransferase Lcho_0029 33855 - 33574 - | hypothetical protein TERM 23 33807 - 33835 + g 70 -13.1 -3.36694 | overlap 33805 33793 TGCCTTCGACCAGCA CGGTGTCGTCGCT CTC GGCGACGACGACG TCTTTCCAGATGGCT Lcho_0030 35243 - 33897 - | hypothetical protein Lcho_0031 36716 - 35295 - | hypothetical protein TERM 24 35727 - 35739 + g 77 -10.5 -4.13767 | overlap 35710 CGCCGGAGCCGGGCT CGGCG TCG CGCCG TTTTCGAGTGCGGCA Lcho_0032 36993 - 37784 + | septum site-determining protein MinC Lcho_0033 37836 - 38654 + | septum site-determining protein MinD Lcho_0034 38659 - 38922 + | cell division topological specificity factor MinE TERM 25 38959 - 38940 - f 86 -9.2 -4.58395 | CCGATCGGTCAAAAA GAGCGGGC TTGG GCGCGCTC GATCAGGGATCGGCA Lcho_0035 39093 - 39410 + | hypothetical protein Lcho_0036 39642 - 40580 + | pyruvate carboxyltransferase TERM 26 41294 - 41268 - g 79 -13.7 -3.58343 | gap 1 GCCATGACCGGCAAA CCCGCCGCGCCG ATGC CGGCGCG-CGAG AGCCCGTGGGCGATC Lcho_0037 40584 - 41813 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 27 41870 - 41859 - f 75 -3.6 -4.81212 | GCGATGACAACAAAA CCGG CCAC CCGA ACCCCGGCCACAGCC Lcho_0038 41903 - 42886 + | hypothetical protein Lcho_0040 45387 - 44116 - | acetyl-CoA acetyltransferase TERM 28 45619 - 45639 + r 71 -10.5 -3.6682 | opp_overlap 45632 CGGTCGGCGACTCTT TTGCTTGCG AAA CGCAAGTAA TTTGCCTCGCTCACC Lcho_0041 46909 - 45695 - | phosphofructokinase Lcho_0042 47597 - 47049 - | Lipocalin family protein TERM 29 49290 - 49314 + G 70 -13.5 -3.15544 | GTCCTACGCCAACCC GGCGCTGGTGC AGC GCGCCACCGCC TTCCTGCGGGTGGCG Lcho_0043 47734 - 49365 + | transcriptional regulator domain-containing protein Lcho_0044 49496 - 49888 + | hypothetical protein Lcho_0045 51038 - 49890 - | adenylate/guanylate cyclase Lcho_0046 51412 - 51035 - | response regulator receiver protein Lcho_0047 52935 - 51409 - | histidine kinase Lcho_0048 53558 - 52932 - | electron transport protein SCO1/SenC TERM 30 53378 - 53328 - G 70 -13 -3.36273 | GGTGGTGAAGATGAA GGTCAGCACCACCACCTTGCCGCG CAG CTCGGCCAGGGCGAGGCGCTGGCC GGACTGGTCGATCAG Lcho_0049 54580 - 53567 - | putative nitrate transport protein NrtA Lcho_0050 55736 - 54594 - | alpha/beta hydrolase fold Lcho_0051 56934 - 55774 - | homoserine O-acetyltransferase Lcho_0052 57209 - 57577 + | globin Lcho_0053 57758 - 58564 + | hypothetical protein Lcho_0054 59270 - 58623 - | histidine kinase Lcho_0055 61462 - 59309 - | sensor protein Lcho_0056 61963 - 61499 - | hypothetical protein Lcho_0057 62156 - 62470 + | hypothetical protein Lcho_0058 62524 - 62937 + | hypothetical protein Lcho_0059 64025 - 63036 - | metallophosphoesterase TERM 31 63927 - 63887 - G 74 -16.7 -2.51464 | overlap 63846 63886 GCAGCAGCCACGAAC CCGGCACGTGCGAGCCGAC ATC GCCGGCCAGCACGAGCAGG TCGGCGCCCGGCGCG Lcho_0060 65026 - 64025 - | luciferase family protein TERM 32 65098 - 65134 + r 70 -14.4 -2.57344 | gap 1, overlap 65102 GGCGTCATTTCCAGA GCTCGACCGGCTGGCCG CGTG CGCGCAGCCGGTCG-GC CTTGTCGCGCAGGTA TERM 33 65102 - 65135 + r 78 -13.7 -3.29144 | overlap 65098 TCATTTCCAGAGCTC GACCGGCTGGCCGCG TGCG CGCAGCCGGTCGGCC TTGTCGCGCAGGTAG Lcho_0061 66136 - 65087 - | thioredoxin-related protein-like protein TERM 34 65308 - 65273 - G 82 -14.8 -3.67597 | gap 1 GCCCGCATCGAAGAA CACCAGCGTGGGCGTGA AGC TCACGCCCA-GCTCGCG CGCCCAGGCGTCGGC Lcho_0062 66423 - 66202 - | SlyX family protein Lcho_0063 67256 - 66471 - | putative cytochrome c Lcho_0064 67573 - 67253 - | sulphur oxidation protein SoxZ Lcho_0065 68076 - 67600 - | sulfur oxidation protein SoxY Lcho_0066 68527 - 68084 - | putative cytochrome c, putative SoxX protein Lcho_0067 70818 - 68548 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 35 69029 - 68988 - G 81 -18.6 -3.03771 | CCAGACCGCGGAACA CGCCCGCGGGCGCCGGCT TGCCCC AGCCGGCGCGCTCGGCCG CGGCGTTGAGCACCG TERM 36 70429 - 70450 + g 70 -12.9 -3.28924 | GGTCGAGAAGTTGCC CCAGGCGCG GTTG CGCGCCAGG TTCTGGCCGGGCGTC Lcho_0068 71318 - 70815 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Lcho_0069 72214 - 74025 + | Bilirubin oxidase Lcho_0070 74058 - 74654 + | hypothetical protein Lcho_0071 75261 - 74662 - | chromate transporter Lcho_0072 75959 - 75258 - | chromate transporter Lcho_0073 76926 - 76003 - | Acyl transferase TERM 37 76393 - 76407 + g 70 -12.8 -3.36273 | GCGCGTGCAGCTGGC GCCGGC CGC GCCGGC TTCGTCTTCGGCGGC Lcho_0074 77872 - 76985 - | triphosphoribosyl-dephospho-CoA synthase MdcB Lcho_0075 78630 - 77869 - | holo-ACP synthase, malonate decarboxylase-specific TERM 38 78062 - 78020 - G 72 -6 -4.42386 | CTGCCATCGACAAAA CCGAGTTCGCCGTCGAGCCG TGG CGCGTCGATGCCGGCCTCGG CCAGAAGGGCCGCCG Lcho_0076 79338 - 78637 - | malonate decarboxylase, gamma subunit Lcho_0077 80243 - 79341 - | malonate decarboxylase, beta subunit Lcho_0078 80578 - 80240 - | malonate decarboxylase acyl carrier protein Lcho_0079 82283 - 80583 - | malonate decarboxylase, alpha subunit TERM 39 82186 - 82221 + g 70 -13.3 -3.40403 | gap 2 GCGGCTACCTCTTCG GCCGCG-CG-CGCCAGG CGGG CCTGGCGGCGGCGCGCC TTGTGATCCCAGGCG Lcho_0080 83327 - 82296 - | hypothetical protein TERM 40 82560 - 82586 + g 77 -4.3 -4.65895 | gap 1, opp_overlap 82577 CGCTTCGATGCTGGT CGGGATGTCCGG GAAA CCGGGCG-CACG TTTTTCGCTCGCCAC Lcho_0081 83480 - 84202 + | GntR family transcriptional regulator Lcho_0082 84204 - 85490 + | aminotransferase class I and II Lcho_0083 86225 - 85554 - | DSBA oxidoreductase TERM 41 85981 - 86013 + g 70 -2.7 -4.48987 | gap 1, overlap 85982 85995 CCGTGCTTCGCGCAC TGGCG-CTCCATGT CGCGCC ACATGTAGGCGCCC TTTTCCTTCTGCAGC TERM 42 86285 - 86255 - H 85 -16.8 -3.06492 | overlap 86258 TCATTCAGTCGAACA CCACCCGGCAGCGC ACC ACGCTGCCGGGCCG AGATGGCCGAGTTCG TERM 43 86282 - 86258 - H 90 -19.3 -2.75074 | overlap 86255 TTCAGTCGAACACCA CCCGGCAGCGC ACC ACGCTGCCGGG CCGAGATGGCCGAGT TERM 44 86698 - 86752 + G 71 -8.3 -4.15106 | overlap 86698 86745 GCGCGATCTGCCCAG C-CCGGCCCGGGTCGGGCAGACGCTGG AGG CCGTCGGC-GCCATGCCCTGGCCGGCG TTTTCGGCCTTGCTG Lcho_0084 86507 - 87097 + | restriction endonuclease Lcho_0085 88604 - 87210 - | serine/threonine protein kinase Lcho_0086 89895 - 88612 - | D-serine deaminase Lcho_0087 90047 - 92119 + | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 45 92307 - 92258 - g 72 -12.1 -3.65812 | opp_overlap 92259 92270 92275, overlap 92259 GCTGGCCGAAGACAA GGCCGTCATCGACGCGATGGAGG GTTA CCTCGATTTCGTCGATTACGGCG GCGCGACGATCTTCC TERM 46 92306 - 92259 - g 72 -15.6 -2.79273 | opp_overlap 92259 92270 92275, overlap 92258 CTGGCCGAAGACAAG GCCGTCATCGACGCGATGGAGG GTTA CCTCGATTTCGTCGATTACGGC GGCGCGACGATCTTC TERM 47 92498 - 92471 - g 77 -14.9 -3.51329 | opp_overlap 92471, overlap 92494 CATCCCGAAGGACAA GCCGGTGCTGC TGTACT GCAACACCGGC ACGCTGTCGGCGCAG Lcho_0088 92178 - 92639 + | rhodanese domain-containing protein TERM 48 92786 - 92764 - f 77 -8.5 -4.25104 | gap 1 CCTTCGGCATGAAAA GCCAA-TGCC GTCA GGCACTTGGC CACTGCTGCGGCGCA Lcho_0089 92887 - 94695 + | putative flavoprotein involved in K+ transport TERM 49 94691 - 94742 + T 77 -15.1 -2.80816 | gap 2, overlap 94671 CGGCGCACCACCGGC GCTGATGTGCGCCACGCGGCGGTGC GACT GCGCCGCCGCG-GGCACTC-TCAGA TCTCGTCGATCGAGG Lcho_0090 95370 - 94738 - | flavin reductase domain-containing protein Lcho_0091 95507 - 96154 + | DTW domain-containing protein Lcho_0092 96875 - 96129 - | carboxymethylenebutenolidase TERM 50 96192 - 96159 - G 79 -7.9 -4.56597 | overlap 96144 96160 96177 CGCCGCCCTGAAAAA CGCCACCGCCTCGGC AAAC GCCAGGTCGGCGGCC TCGGGGTCGAAGCGC TERM 51 96536 - 96505 - G 78 -11.4 -3.91897 | overlap 96506 CCGCCGATGCAGAAA CCGGCCGCGCCGAG CTGG CCCGGCGCCACCGC AGGGTGGCTCGCCAG TERM 52 96535 - 96506 - G 70 -14.9 -2.94924 | overlap 96505 CGCCGATGCAGAAAC CGGCCGCGCCGAG CTGG CCCGGCGCCACCG CAGGGTGGCTCGCCA Lcho_0093 97954 - 96911 - | aldo/keto reductase TERM 53 97465 - 97506 + g 74 -9.4 -4.15044 | gap 1, overlap 97466 AGATGCCGATGTAGA GCGCC-TTGCCCTGGCTCA CCGCA TGAGCCAGCGCGGCGGCGG TTTCTTCGAGCGGGG TERM 54 98572 - 98590 + G 76 -3 -4.72272 | overlap 98571 GCTCTTCGGCGTGTT CGGCACCA CCG TGCTGGCG TTTTTCCTGGCCGAG Lcho_0094 98264 - 98836 + | hypothetical protein Lcho_0095 100721 - 98859 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing Lcho_0096 100889 - 101395 + | AsnC family transcriptional regulator Lcho_0097 101852 - 101370 - | heat shock protein DnaJ domain-containing protein Lcho_0098 103268 - 101859 - | UDP-N-acetylglucosamine pyrophosphorylase Lcho_0099 103357 - 104235 + | putative lipoprotein Lcho_0100 104854 - 104204 - | putative lipoprotein Lcho_0101 105885 - 104905 - | PP-loop domain-containing protein Lcho_0102 106280 - 105882 - | dihydroneopterin aldolase Lcho_0103 107143 - 106331 - | short-chain dehydrogenase/reductase SDR TERM 55 107055 - 107111 + g 85 -20 -2.52464 | gap 1 AGCGCGATCGCGCGG CCGAGCCGGCGCGCGCCG-CCGGTGAC CAGG GTCAGCGGGCGGCGCACGACGGGCCGG TCAGTTGCGGCGGCA TERM 56 108045 - 108076 + G 76 -11.5 -3.7282 | gap 1 TGGCCTACATCCTGA CGCTG-GCCGAGCG GCTGG CGCGCGGCGCGGCG TTCTTCATCGACTAC Lcho_0104 107261 - 108475 + | hypothetical protein Lcho_0105 108525 - 108716 + | hypothetical protein Lcho_0106 109925 - 108666 - | polynucleotide adenylyltransferase/metal dependent phosphohydrolase Lcho_0107 110695 - 109970 - | glutathione S-transferase domain-containing protein Lcho_0108 112120 - 110723 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 57 111244 - 111213 - G 71 -8.7 -4.07687 | gap 2, opp_overlap 111212, overlap 111200 111197 AGGTCGGCGCGAAAA CGCCCGTCGCGCACC ATCT GGT-CGAG-CGGGCG GTTGGTGGCGCTGAT TERM 58 111285 - 111310 + g 100 -11.1 -5.06414 | gap 1, overlap 111283 TGCACCTGCTGCTCG CGCAGGCCGCCG AGC CGGCG-CATGCG TTTTTCTTCCAGCAG TERM 59 111428 - 111445 + g 80 -6.2 -4.72272 | overlap 111413 GGCCTTGCGCTGGCG GGCGTC GGTGAA GGCGCC TTTTTCGTAGCCGAA Lcho_0109 113549 - 112164 - | histidine kinase Lcho_0110 114638 - 113673 - | NADH dehydrogenase TERM 60 114695 - 114656 - R 77 -11.4 -3.75153 | gap 1 TCCCTCCAACCGAAA CTGCCGCAA-GCCGTACCG TGC CGATCCGGCGCTGCGCCAG CGACACGGTCAGGGC Lcho_0111 116776 - 114704 - | lytic transglycosylase catalytic Lcho_0112 117851 - 116889 - | LysR family transcriptional regulator TERM 61 117989 - 117975 - gR 70 -5.6 -4.30576 | opp_overlap 117974, overlap 117986 TGTGGATGAGGAAAA CGCATG AAT CAGGCG ACTTCTCGAAGGCCG Lcho_0114 118644 - 118240 - | TfoX domain-containing protein Lcho_0113 117947 - 118411 + | hypothetical protein Lcho_0115 118764 - 119354 + | 5-formyltetrahydrofolate cyclo-ligase TERM 62 119387 - 119360 - T 77 -13.5 -3.34344 | gap 1, opp_overlap 119361 119364, overlap 119361 119364 CGACGCCTGAATGAA TGCAGCCGCGGG GGTTG CCCGCGGCTG-A TGTCTCCTGCGCTGT TERM 63 119361 - 119387 + T 79 -15.1 -2.94925 | opp_overlap 119360 119361 119364, overlap 119364 GACGCCTGAATGAAT GCAGCCGCGGG GGTTG CCCGCGGCTGA TGTCTCCTGCGCTGT TERM 64 119387 - 119361 - T 74 -15.1 -2.60392 | opp_overlap 119361 119364, overlap 119360 119364 GACGCCTGAATGAAT GCAGCCGCGGG GGTTG CCCGCGGCTGA TGTCTCCTGCGCTGT TERM 65 119364 - 119384 + T 78 -15.4 -2.71268 | opp_overlap 119360 119361 119364, overlap 119361 GCCTGAATGAATGCA GCCGCGGG GGTTG CCCGCGGC TGATGTCTCCTGCGC TERM 66 119384 - 119364 - T 77 -15.4 -2.60244 | opp_overlap 119364 119361, overlap 119360 119361 GCCTGAATGAATGCA GCCGCGGG GGTTG CCCGCGGC TGATGTCTCCTGCGC Lcho_0116 120034 - 119438 - | OmpW family protein Lcho_0117 121123 - 120284 - | 5,10-methylenetetrahydrofolate reductase TERM 67 120383 - 120344 - G 75 -15 -3.30124 | gap 1 GTTCATCGTGTAGAA GTGCAAG-GCCGGCACGCC GCC GGCACGCAGGCGCTCGCAC AGGTCGGTGACCACG Lcho_0118 122067 - 121159 - | ribosomal RNA methyltransferase RrmJ/FtsJ Lcho_0119 123500 - 122067 - | adenosylhomocysteinase Lcho_0120 123915 - 124490 + | intradiol ring-cleavage dioxygenase TERM 68 125424 - 125373 - g 100 -21.5 -3.62046 | gap 1, overlap 125374 CCACCGCGGCAACAA CCCGCGCC-CGGCCGGCAACCGCC CCGCC GGCGGCCGCCCGCCGCGGCGCTGA GGTCGTGGTGGCGAC TERM 69 125423 - 125374 - g 90 -22.8 -2.77013 | gap 1, overlap 125373 CACCGCGGCAACAAC CCGCGCC-CGGCCGGCAACCGCC CCGCC GGCGGCCGCCCGCCGCGGCGCTG AGGTCGTGGTGGCGA Lcho_0121 124582 - 125424 + | hypothetical protein Lcho_0122 125496 - 126713 + | phosphoribosylglycinamide formyltransferase 2 Lcho_0123 126766 - 126960 + | hypothetical protein Lcho_0124 126976 - 127782 + | hypothetical protein Lcho_0125 128880 - 127798 - | hypothetical protein Lcho_0126 130107 - 128926 - | methionine adenosyltransferase TERM 70 130198 - 130256 + H 71 -8.1 -4.10744 | gap 1 GATTCGGATCAGCAC CTTTCGGTGAAGCGTGTCGGACAATCCG TGCA TGGATT-TCCGACCCGTCGCCCCGCAAG TTGTTCTTTAACTCG TERM 71 130321 - 130338 + H 89 -10.5 -4.57073 | opp_overlap 130321 CTGTTCCGTCTAACA GCCCGGC TTCC GCTGGGC TTTTTGCAGCGCATG Lcho_0127 130351 - 131220 + | lipid A biosynthesis acyltransferase Lcho_0128 131217 - 132101 + | lipid A biosynthesis acyltransferase Lcho_0129 132156 - 133049 + | diaminopimelate epimerase Lcho_0130 133159 - 133839 + | hypothetical protein TERM 72 134474 - 134495 + G 70 -13.7 -3.14211 | opp_overlap 134470 GCGCCATCAGATGGC CAGGGCCGG TGAG CTGGCCCTG TTCGTCAGCCGCCGT Lcho_0131 133836 - 134774 + | integrase family protein Lcho_0132 136296 - 134806 - | xylulokinase Lcho_0133 137297 - 136350 - | AraC family transcriptional regulator TERM 73 136595 - 136650 + g 70 -12.5 -3.35679 | gap 1, overlap 136596 AGCGGGAAAAGCGGC TCTCGCTCATGCCCAGTTCGGCGGCC ACGTC GGCGGCCGAGATCGGC-TGCGCGAGG TTGTCGGTCAGGCGC TERM 74 137374 - 137341 - R 89 -14.5 -3.72576 | gap 1, overlap 137322 TGCTCCGCCACGAAA CGCGCCACGCGCTCGG CGG CCGCGCGCACGGC-CG TGACCAGGCGAGCGT Lcho_0134 138716 - 137319 - | mannitol dehydrogenase domain-containing protein Lcho_0135 139803 - 138751 - | ABC transporter-related protein Lcho_0136 140660 - 139830 - | binding-protein-dependent transport systems inner membrane component Lcho_0137 141541 - 140669 - | binding-protein-dependent transport systems inner membrane component Lcho_0138 142958 - 141654 - | extracellular solute-binding protein Lcho_0139 143174 - 144367 + | PUA domain-containing protein Lcho_0140 144486 - 144839 + | hypothetical protein Lcho_0141 144947 - 146185 + | outer membrane efflux protein TERM 75 146199 - 146236 + G 71 -15.5 -3.00525 | overlap 146194 GAAGCCATCCCTTTC TTTCGTGCGCCAAGGCC TGCT GGCCTTGGCGCTCGCCA TCTCGTTTCCGCCAC Lcho_0142 146182 - 146805 + | hypothetical protein TERM 76 147357 - 147347 - g 71 -8.2 -4.07885 | CACCGCCCGCGAAAA CGCC ATC GGCG CCAGCCTGGGCAGCA Lcho_0143 146802 - 147908 + | hypothetical protein Lcho_0144 147928 - 151071 + | CzcA family heavy metal efflux protein Lcho_0145 151151 - 151522 + | hypothetical protein Lcho_0146 151677 - 152081 + | hypothetical protein Lcho_0147 152223 - 152666 + | hypothetical protein Lcho_0148 152768 - 154960 + | heavy metal translocating P-type ATPase Lcho_0149 155707 - 154994 - | ankyrin Lcho_0150 156281 - 155763 - | hypothetical protein TERM 77 156065 - 156099 + g 73 -13.5 -3.28712 | GTTGCACCGCCCGCA CGCCACCGGCGCGGT CGACC ACCGTGGCGGTGACG TTGTAGCCCGCCGCC Lcho_0151 156582 - 156905 + | flagellar transcriptional activator Lcho_0152 156940 - 157476 + | flagellar transcriptional activator FlhC Lcho_0153 157652 - 158707 + | 2-dehydropantoate 2-reductase Lcho_0154 159054 - 160397 + | flavin-containing monooxygenase FMO TERM 78 160435 - 160469 + T 100 -18.6 -4.03888 | TGCCGGCCTGAATCG GGCCCGGTGCCGCA TGGCAAT TGCGGAACCGGGCC TTCTTCTTGTCAGTG TERM 79 160535 - 160507 - T 100 -23.9 -5.18726 | TGCGGACAAGAAAAA GCCCTGCGGCGCA GAT CGCGCCGCAGGGC TCGGGTCGACGGTGC Lcho_0155 162923 - 160551 - | glycine cleavage T protein (aminomethyl transferase) Lcho_0156 163261 - 162923 - | nitrogen regulatory protein P-II Lcho_0157 164651 - 163308 - | ammonium transporter TERM 80 163735 - 163702 - G 76 -7.3 -4.37092 | gap 1, overlap 163703 ATCGGGCCGACAAAA CCGCAGGCCGGCGTGA TCG CCAC-CAGGCCGGCGA TCGCACCCGAGACGG Lcho_0158 166515 - 164806 - | electron-transferring-flavoprotein dehydrogenase TERM 81 165763 - 165733 - G 77 -11.1 -4.0371 | gap 1, opp_overlap 165761 GAGGTGGTAGAGAAA GCCG-CCGCCGAAG GTGT CGTCGGCGATCGGC CAGCCGGCGGTGTGC TERM 82 165761 - 165798 + g 75 -14.1 -3.54543 | gap 1, opp_overlap 165733 GTGTCGTCGGCGATC GGCCAG-CCGGCGGTGTG CAC CACGCGGCCGGGCTGGGC TTTGGCGGGATCGAT Lcho_0159 167347 - 166535 - | N-formylglutamate amidohydrolase Lcho_0160 168375 - 167344 - | LysR family transcriptional regulator TERM 83 168656 - 168611 - g 83 -17 -3.28712 | gap 1 TTTGGGCGCCCAGAA GGTGCTGGTGCTCGA-CCG GCTGCAGAT CGGCTCGGGCACCAGCACC CAGTCGTCGGGCATC TERM 84 168957 - 168967 + G 71 -8.2 -4.07885 | CTGATCGGCTACGAG CCCG AGG CGGG TTTTGCCGACGCCTA Lcho_0161 168525 - 169709 + | FAD dependent oxidoreductase Lcho_0162 169726 - 170487 + | electron transfer flavoprotein alpha/beta-subunit Lcho_0163 170499 - 171452 + | electron transfer flavoprotein alpha subunit Lcho_0164 171449 - 172054 + | hypothetical protein Lcho_0165 172666 - 172064 - | XRE family transcriptional regulator Lcho_0166 172841 - 174235 + | glutamine synthetase, type III Lcho_0167 174247 - 175155 + | glutamine amidotransferase class-II Lcho_0168 175143 - 175832 + | glutamate synthase alpha subunit Lcho_0169 175834 - 177204 + | ferredoxin-dependent glutamate synthase Lcho_0170 177216 - 177809 + | hypothetical protein TERM 85 178068 - 178020 - g 71 -16 -2.67515 | gap 2, overlap 178017 CCCACTACGACATCA TCGTGCGCCGCGTGCCGGCTTCGC GCG GCGGATC-GGC-CGCGGTGCACGA GCGCCTCAAGCCCGG Lcho_0171 177806 - 178756 + | ferredoxin Lcho_0172 178783 - 179862 + | hypothetical protein Lcho_0173 179958 - 181088 + | glycine cleavage T protein (aminomethyl transferase) Lcho_0174 181093 - 181956 + | formyltetrahydrofolate deformylase Lcho_0175 181966 - 182871 + | methenyltetrahydrofolate cyclohydrolase TERM 86 184609 - 184627 + G 72 -11.6 -3.66178 | TCGGCGTCGGCCCTG CGCGCGAC TGG GCCGCGCG TTTCGGCTTCGACCC TERM 87 184851 - 184803 - g 73 -15.2 -3.14344 | gap 2, opp_overlap 184829 184833, overlap 184833 184836 CAGGTGCTCTACGAA GCGCCGGCCCCGGCGGCGCTGGTC GAG GAACGACG-CGCCGTG-CCGGCGC GCAATGTCTTCGTCA Lcho_0176 182985 - 185315 + | 1A family penicillin-binding protein Lcho_0177 185708 - 185343 - | nitrite reductase (NAD(P)H), small subunit Lcho_0178 188257 - 185723 - | nitrite reductase (NAD(P)H), large subunit Lcho_0179 188903 - 189370 + | cyclic nucleotide-binding protein TERM 88 189386 - 189437 + F 81 -15.7 -3.02511 | gap 1, opp_overlap 189352 TTCCCGACCCGACCC GGCCTGACCCGCGCGGCGCGGCCG CATCA CGTCCG-GTCGCGCGGGCGATGCC TGTTCGGGCAGTGCG Lcho_0180 189530 - 189931 + | transcriptional coactivator/pterin dehydratase TERM 89 189938 - 189966 + T 91 -16.7 -3.53012 | ACGGACTGATTCGCG GCCGGCGGCTCAG CCC TTGAGCAGCCGGC TTTCGGCCAGCGCGA Lcho_0181 191944 - 189947 - | sodium/hydrogen exchanger Lcho_0182 191995 - 192987 + | KpsF/GutQ family protein Lcho_0183 192990 - 193601 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Lcho_0184 193625 - 194320 + | hypothetical protein Lcho_0185 194353 - 195156 + | short-chain dehydrogenase/reductase SDR TERM 90 195191 - 195217 + T 88 -14.4 -3.91897 | opp_overlap 195191 TCGCCCATGAAAAAA GGTGCCGAACCC TGA GGGTCTGGCACC TTTCTGGATCAAAGA TERM 91 195217 - 195191 - T 100 -14.4 -5.14563 | opp_overlap 195191 TCGCCCATGAAAAAA GGTGCCGAACCC TGA GGGTCTGGCACC TTTCTGGATCAAAGA TERM 92 195254 - 195233 - T 72 -10.9 -3.44848 | gap 1, opp_overlap 195232, overlap 195231 TTTCTGGATCAAAGA GCGG-CTTGC CAG GCAAGGCCGC CTTCAATCGGGTATC Lcho_0186 195745 - 195272 - | RNP-1 like RNA-binding protein TERM 93 196084 - 196096 + G 80 -6.9 -4.74801 | CATCGTCAACCCGAT CGGCG TGG TGCCG TTTTTCATCCACTTC TERM 94 196372 - 196349 - g 76 -8.8 -4.19624 | GAGGGTGAACAGAAA GCCGATGCCG GAGC CAGCATCGCC GTGGTGCCGCTGACC Lcho_0187 196034 - 196675 + | multiple antibiotic resistance (MarC)-related protein Lcho_0188 196746 - 198404 + | glucose-methanol-choline oxidoreductase TERM 95 198460 - 198486 + F 75 -4.5 -4.59773 | overlap 198462 198464 GCGGGTAAGCCCTGA TGTGTAGGGAG GCCGG TTCCCTATATA TTTTTGCGACTCGCA TERM 96 198668 - 198647 - f 93 -17.3 -3.80893 | opp_overlap 198647 AGGCGACAATTGAAA GGCGCCGGT TCAC ACCGGCGCC TTTTCTTTTTTGAAG TERM 97 198647 - 198668 + F 100 -17.3 -5.42198 | opp_overlap 198647 AGGCGACAATTGAAA GGCGCCGGT TCAC ACCGGCGCC TTTTCTTTTTTGAAG Lcho_0189 198694 - 199455 + | hypothetical protein Lcho_0190 200359 - 199583 - | beta-lactamase domain-containing protein Lcho_0191 201328 - 200642 - | FHA domain-containing protein Lcho_0192 202183 - 201377 - | protein serine/threonine phosphatase TERM 98 202018 - 202037 + g 70 -12.8 -3.28924 | opp_overlap 202004 ACGCGGTCGCCATGC CGCTGGCG ACTT CGCCGGCG TTGTAGCCGCCCATG Lcho_0193 203130 - 202186 - | serine/threonine protein kinase TERM 99 203180 - 203165 - R 73 -11.8 -3.32844 | opp_overlap 203165 203164 CGTCCGAGCCGATAA GGCCCC AGGC GGGGCC CTTCTGGTTCACCGG Lcho_0194 204043 - 203300 - | integral membrane protein TerC TERM 100 204466 - 204414 - g 90 -12.4 -4.183 | overlap 204397 204415 204458 204460 204461 204463 GCAACTGCGAAGAAA GCCGCCGCCAAGCCGGCACCGGCC GATAA GGCCGCGGCCGACAAGACGACGGT GGTCGCCCAGACCCC TERM 101 204465 - 204415 - g 75 -15.9 -3.10498 | overlap 204397 204414 204458 204460 204461 204463 CAACTGCGAAGAAAG CCGCCGCCAAGCCGGCACCGGCC GATAA GGCCGCGGCCGACAAGACGACGG TGGTCGCCCAGACCC Lcho_0195 204396 - 204797 + | SWIB/MDM2 domain-containing protein TERM 102 204812 - 204837 + T 71 -13.3 -3.01712 | AGCTGGCGATCCAGG CTCGGATCCCG TCGG TGGGATCCGGG TGTTGGCAGACAACC TERM 103 204846 - 204871 + T 100 -13.3 -5.24129 | opp_overlap 204851, overlap 204851 ATCCGGGTGTTGGCA GACAACCCGGC CTCG GCCGGGTTTTC TTTTTTCTACAGGCC TERM 104 204851 - 204866 + T 100 -11.8 -5.49579 | opp_overlap 204851, overlap 204846 GGTGTTGGCAGACAA CCCGGC CTCG GCCGGG TTTTCTTTTTTCTAC TERM 105 204866 - 204851 - T 75 -11.8 -3.48276 | opp_overlap 204846 204851 GGTGTTGGCAGACAA CCCGGC CTCG GCCGGG TTTTCTTTTTTCTAC Lcho_0196 205825 - 204878 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 106 205874 - 205902 + H 73 -9.6 -3.93984 | gap 1 GTGATCACGTCGGGA TCGCCA-GCCGCA AGAA TACGGCATGGCGA TTTCTCCCTCCCTTT Lcho_0197 205896 - 206510 + | hypothetical protein Lcho_0198 206541 - 207449 + | parB-like partition protein TERM 107 208224 - 208208 - g 71 -6.6 -4.25256 | CCTGGAGGAAAAGAA GCAGAT CCTGT ATCTGC TGGGCCCGGTCGGGG Lcho_0199 207900 - 209822 + | putative serine protein kinase, PrkA Lcho_0200 209847 - 211133 + | hypothetical protein Lcho_0201 211171 - 212769 + | SpoVR family protein TERM 108 212789 - 212830 + T 100 -22.3 -3.53012 | overlap 212792 CGCGATCCCCGATCT GAACGGCGGCCCGGTTGCA GCTC TGCAGCCGGGCCGCCCTGC TTTCACCAGGCGAAG TERM 109 212792 - 212827 + T 100 -22.6 -2.90496 | overlap 212789 GATCCCCGATCTGAA CGGCGGCCCGGTTGCA GCTC TGCAGCCGGGCCGCCC TGCTTTCACCAGGCG Lcho_0202 214254 - 212833 - | D-lactate dehydrogenase (cytochrome) Lcho_0203 214368 - 215111 + | Crp/FNR family transcriptional regulator Lcho_0204 215211 - 215405 + | hypothetical protein TERM 110 215462 - 215406 - T 81 -16.4 -2.53382 | gap 2, opp_overlap 215406 215407 ATGAGCGCCAAGTGA GCGCCGCGCCGGCCTAGCGTGCGGGCGC CTG GCGCCCGCT-GCC-GGCCGGCGGATCGG TGTCGTTCGTGTCGC TERM 111 215406 - 215462 + T 75 -14.2 -2.95521 | gap 2, opp_overlap 215406, overlap 215407 ATGAGCGCCAAGTGA GCGCCGCGCCGGCCTAGCGTGCGGGCGC CTG GCGCCCGC-TGCC-GGCCGGCGGATCGG TGTCGTTCGTGTCGC Lcho_0205 216225 - 215419 - | GntR family transcriptional regulator Lcho_0206 217178 - 216294 - | binding-protein-dependent transport systems inner membrane component Lcho_0207 218074 - 217178 - | binding-protein-dependent transport systems inner membrane component TERM 112 218026 - 217994 - G 95 -3.4 -5.31275 | gap 2, overlap 218003 218006 CGGCACGACAAAAAA CAGCACGAACACCGCC GTC AGCGGCG-CCGC-CTG AAGCCAGGCGTAGAG Lcho_0208 219402 - 218095 - | twin-arginine translocation pathway signal Lcho_0209 220488 - 219487 - | ABC transporter-related protein Lcho_0210 220745 - 221488 + | Asp/Glu/hydantoin racemase TERM 113 222533 - 222577 + G 72 -12.9 -3.53012 | gap 3 TTCGGCCTGTCGGCT GCGCAGGCGCTGGGGCAGCCGC TCGA GCGGCTGATCC--CGCC-GCGC TTTCGGGGCGGCCAC TERM 114 222819 - 222785 - g 79 -17 -3.11634 | CGCGACATCACCGAA CGCAGCCGGGCCGAGG AGG CCGCGGTGCGGCTGCG CATCGCCGAAGAACA Lcho_0211 221594 - 223609 + | PAS/PAC sensor signal transduction histidine kinase Lcho_0212 224543 - 223578 - | hypothetical protein TERM 115 223899 - 223877 - G 85 -19.2 -3.01791 | AGCGCGCCTCGAACA GCTGCAGCGC CTG GCGCTGCAGC CAGCGCTGCACGCCT Lcho_0213 225285 - 224521 - | phospholipid/glycerol acyltransferase Lcho_0214 225884 - 225285 - | histidinol-phosphate phosphatase family protein Lcho_0215 228036 - 225895 - | glycyl-tRNA synthetase, beta subunit Lcho_0216 228995 - 228042 - | glycyl-tRNA synthetase, alpha subunit Lcho_0217 229903 - 229088 - | hypothetical protein TERM 116 229245 - 229286 + gr 71 -7.8 -4.08216 | gap 1, overlap 229246 CTGGCTTCGGGGATC AGCCGGCGGGC-GCGGCGT TCGGC GCGGCGCTGCTCGCGGGCG TTTTCGCGGCGCTCC Lcho_0218 230666 - 229842 - | nucleotidyl transferase TERM 117 230667 - 230716 + r 75 -14.1 -3.04144 | opp_overlap 230696, overlap 230639 230638 TAGAGGTGAGGCCAT GCGCGCCAGTTTAGGTGGGGCTC AACC GAGTCCGACCGGCGCCGGCGCGC TGTTGACGATGCGGC Lcho_0219 231263 - 230688 - | hemerythrin HHE cation binding domain-containing protein TERM 118 231406 - 231418 + H 89 -4.7 -5.13473 | overlap 231389 GCGCCGGTAAAATCG CCGGC TCC GCCTG TTTTTTCCATCTCAT Lcho_0220 231449 - 233494 + | transketolase Lcho_0221 233567 - 234565 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 119 234619 - 234642 + F 100 -16 -5.14563 | opp_overlap 234593 GCCGGGTTGCCAGGA GGCCCTGTCC GCAA GGACGGGGCC TTTTTTCATGGGCGG Lcho_0222 234731 - 236197 + | hypothetical protein TERM 120 236457 - 236479 + G 71 -14.8 -3.01497 | overlap 236452 CCTCCCGAAGCTGCC GCGGCTGGTG GCG CGCCGGCCGC TGTCGTTTCCGGTCA Lcho_0223 236209 - 236835 + | hypothetical protein TERM 121 239482 - 239467 - g 70 -4 -4.4078 | gap 1, overlap 239469 GCTGCTCAATGAAAA CACCATC CGC GA-GGTG GCGCATTTCCAGTCG Lcho_0224 236825 - 240226 + | hypothetical protein Lcho_0225 240223 - 241437 + | hypothetical protein Lcho_0226 242085 - 241426 - | putative signal peptide protein Lcho_0227 242867 - 242079 - | biotin--acetyl-CoA-carboxylase ligase TERM 122 242659 - 242691 + g 70 -12.5 -3.31144 | CGCCCGGGTGCGGAA CTCCAGCTGCGGCCG AGC CGGCCGCGACCGGCG TTCTGGCGCTCGGCC Lcho_0228 243415 - 242876 - | nuclear protein SET TERM 123 243519 - 243496 - H 77 -14.6 -2.90763 | gap 1 CGCAGATTGTAGAGA GCGCACCGGCC CGG GGCCGGTG-GC ACAAGCAGGGTCAAG TERM 124 244616 - 244596 - g 77 -16.9 -2.90075 | CGGTGGCCAAGGAGA CGCTGGCGA TGA TCGCCAGCG AGGACCTGCCCGGCC TERM 125 245659 - 245617 - g 82 -18.4 -3.21099 | opp_overlap 245617, overlap 245620 CTTCTCGATCAGCAA GATCCCGGGCTCGCGCAGCT TCG AGCTGCACGAGGCCGAGGCC TTCCTGCGCGACCAC TERM 126 245617 - 245659 + G 70 -14 -3.14132 | opp_overlap 245617 245620 CTTCTCGATCAGCAA GATCCCGGGCTCGCGCAGCT TCG AGCTGCACGAGGCCGAGGCC TTCCTGCGCGACCAC TERM 127 245656 - 245620 - g 88 -20.9 -2.50016 | opp_overlap 245617, overlap 245617 CTCGATCAGCAAGAT CCCGGGCTCGCGCAGCT TCG AGCTGCACGAGGCCGAG GCCTTCCTGCGCGAC Lcho_0229 243539 - 246169 + | DNA topoisomerase III Lcho_0230 246166 - 247317 + | metal dependent phosphohydrolase Lcho_0231 247339 - 248295 + | auxin efflux carrier TERM 128 248353 - 248386 + T 75 -15.3 -2.70932 | gap 1, overlap 248355 GCCTCAGCGCGGCCG CAATGCCAGCGGCCGG ATG CCGGC-GCTGGCGATG TGGTTCAGGAAGGGC Lcho_0232 248832 - 248341 - | hypothetical protein TERM 129 249830 - 249852 + G 77 -14.8 -3.54475 | GATCCTGGCGCTGAT CGGCCTGACC GCC GGCCAGGCCG TTGTCTGGTACACGG Lcho_0233 249060 - 250733 + | general substrate transporter TERM 130 250780 - 250801 + F 90 -15.9 -3.78953 | opp_overlap 250777, overlap 250783 TTCTCGCACAATGTC GAAGCGCCC TGCG GGGCGCTTC TTTCGTGATCACCCT TERM 131 250783 - 250798 + F 84 -11.8 -4.0274 | opp_overlap 250777, overlap 250780 TCGCACAATGTCGAA GCGCCC TGCG GGGCGC TTCTTTCGTGATCAC Lcho_0234 250841 - 251014 + | hypothetical protein Lcho_0235 251063 - 251251 + | hypothetical protein TERM 132 252312 - 252338 + GF 74 -14.5 -2.62184 | overlap 252310 CCACCGGCATGGTGA TCGTCGAGGCC ATCGC GGTCTCGACGA TGGTCTGCAACGACC TERM 133 252598 - 252619 + GF 71 -10.8 -3.63627 | CACGCGCAATGGCGC GCTGGCCG GGCTCG CGGCCGGC TTTGCGGTCTGGGCC TERM 134 252924 - 252969 + GF 74 -10.4 -3.72576 | gap 3, overlap 252925 252958 CGGCACCGGTGTTCT GGCGCGGCC-G-G-GCGCGGGTC GAG GACCTGCGCGCGCTGGCGGCGCG TTTCCTCGGCGAGGC TERM 135 252925 - 252968 + GF 73 -13.9 -2.83403 | gap 3, overlap 252924 252958 GGCACCGGTGTTCTG GCGCGGCC-G-G-GCGCGGGTC GAG GACCTGCGCGCGCTGGCGGCGC GTTTCCTCGGCGAGG Lcho_0236 251255 - 254062 + | histidine kinase Lcho_0237 254034 - 254408 + | response regulator receiver protein TERM 136 254832 - 254781 - g 72 -15.6 -2.78596 | CACTGCGCCAGGACA TGGCCGCGCAGGTGCTCGCCGCCA GCCG CGGCGTCGAGCTCGAGCGCAGCCG ACTGGCCGCGCTGAT TERM 137 255498 - 255468 - g 76 -16.8 -2.80816 | GGCCGATGGAGGACA TGCTCGGCGCCGAC CTG GTCGCCGCCGCGCA GCGCCGCATCGAGAG Lcho_0238 254405 - 256600 + | DNA polymerase III, epsilon subunit Lcho_0239 256769 - 257434 + | YbaK/prolyl-tRNA synthetase associated region TERM 138 258743 - 258726 - g 73 -14.1 -3.4252 | overlap 258706 CGCCAGCTACGACAA CCGCGCG CTGC CGCGCGG CGCCGCCACCGTGGT Lcho_0240 257542 - 259233 + | major facilitator transporter Lcho_0241 260456 - 259269 - | hypothetical protein Lcho_0242 261088 - 260453 - | two component LuxR family transcriptional regulator Lcho_0243 262557 - 261085 - | histidine kinase TERM 139 261335 - 261361 + g 72 -11.4 -3.62046 | GCGGCGATGTCGATG CGAGCGGCGCCG CTG TGGCGCAGCGCG TTGTTGAGCGCCTCC Lcho_0244 262651 - 262833 + | coenzyme PQQ biosynthesis protein A TERM 140 262882 - 262912 + F 100 -21.9 -3.74345 | gap 1 CCCGTCGAACCCCGA GGCCCGGCCGCAGC TCCC GC-GCGGCCGGGCC TTTCCATCTGTGCCT Lcho_0245 262948 - 263862 + | coenzyme PQQ biosynthesis protein B Lcho_0246 263895 - 264674 + | coenzyme PQQ biosynthesis protein C Lcho_0247 264671 - 264967 + | coenzyme PQQ synthesis D TERM 141 265226 - 265244 + G 70 -10.2 -3.85817 | overlap 265225 TCGAGGAGATGATCG CCGAGGCG CAC CGGCTCGG TTTCTACACCAACCT Lcho_0248 264964 - 266124 + | coenzyme PQQ biosynthesis protein E Lcho_0249 266201 - 266644 + | UspA domain-containing protein Lcho_0250 267115 - 266729 - | hypothetical protein Lcho_0251 267866 - 267120 - | cytochrome c oxidase subunit III Lcho_0252 268561 - 267893 - | cytochrome c oxidase subunit III TERM 142 268260 - 268218 - G 93 -17.7 -3.78775 | gap 1 TGCGTGACCAGGAAA CCGCACGCCAGC-GCTGCCG CGGC CAGCAGCCGCTGGCGGGCCG GCCGGTGCTGCGCGC TERM 143 268478 - 268423 - G 85 -19 -3.06315 | gap 1, opp_overlap 268456, overlap 268414 CGAACAGCGCGAACA GCACGCCGATCACCGCCATCAGCAGCC ACA GGCCGACGCTGACGTTG-TCGGCGTGC AGCGGCGTGGGGTGC Lcho_0253 270324 - 268558 - | cytochrome c oxidase, subunit I TERM 144 269857 - 269809 - G 73 -14.5 -3.21099 | overlap 269811 269812 269814 GGCCGCGACGATGAA GATCAGCAGCGACACCAGCATCA GCA CGATGCCGGCGTCGCTGCCGGGT GTGCCGGGCAGGATG TERM 145 269855 - 269811 - G 93 -21.5 -3.17051 | overlap 269809 269812 269814 CCGCGACGATGAAGA TCAGCAGCGACACCAGCATCA GCA CGATGCCGGCGTCGCTGCCGG GTGTGCCGGGCAGGA TERM 146 269854 - 269812 - G 95 -25 -2.50016 | overlap 269811 269809 269814 CGCGACGATGAAGAT CAGCAGCGACACCAGCATCA GCA CGATGCCGGCGTCGCTGCCG GGTGTGCCGGGCAGG TERM 147 269852 - 269814 - G 95 -24 -2.78495 | overlap 269812 269811 269809 CGACGATGAAGATCA GCAGCGACACCAGCATCA GCA CGATGCCGGCGTCGCTGC CGGGTGTGCCGGGCA TERM 148 270211 - 270238 + g 72 -12.8 -3.44527 | GCCGACCGCGATGGC GGTGATCGCG TACTGGAT CGCGATCACC TTGTGGTCCTGGCTC Lcho_0254 271176 - 270367 - | cytochrome c oxidase subunit II TERM 149 270625 - 270661 + g 70 -13 -3.4252 | gap 1, overlap 270627 GTTGGAGCGCAGTTG C-AGCTGCACCGGGCGC GCCA GCGGCAGGTGCAGCTCG TTGTCGTCGATCAGC TERM 150 270627 - 270658 + g 73 -15.8 -2.86747 | overlap 270625 TGGAGCGCAGTTGCA GCTGCACCGGGCGC GCCA GCGGCAGGTGCAGC TCGTTGTCGTCGATC TERM 151 271052 - 271033 - G 80 -3.5 -4.78107 | gap 1, opp_overlap 271038 GATCACCACGAAAAA CGC-GCCG GTGAT CAGCAGCG TGATGGTCAGCGTGT Lcho_0255 271731 - 271228 - | hypothetical protein Lcho_0256 271937 - 272416 + | YbaK/prolyl-tRNA synthetase associated region Lcho_0257 272459 - 273232 + | hypothetical protein Lcho_0258 273378 - 273941 + | peroxiredoxin TERM 152 273982 - 274006 + F 84 -13.6 -3.59979 | opp_overlap 273986, overlap 273983 AGCTGACCGTCTGAT TGAAGGCCCG TACCC CGGGCCTTCG TTTCGCCTGAGCCCC TERM 153 273983 - 274005 + F 75 -14.9 -2.75844 | opp_overlap 273986, overlap 273982 GCTGACCGTCTGATT GAAGGCCCG TACCC CGGGCCTTC GTTTCGCCTGAGCCC Lcho_0259 274065 - 275648 + | alkyl hydroperoxide reductase, F subunit Lcho_0260 276581 - 275673 - | LysR family transcriptional regulator Lcho_0261 276698 - 277339 + | DSBA oxidoreductase TERM 154 277723 - 277754 + G 72 -15.9 -2.79183 | gap 1 TTCGCCCAAGGTGGC GCAGCTGCGGCGCG ATCCA CGCGCCGT-GCTGC TGTGCTGGAGCTCAA Lcho_0262 277484 - 278080 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding Lcho_0263 278230 - 278706 + | hypothetical protein Lcho_0264 278717 - 280453 + | peptidase M61 domain-containing protein TERM 155 280717 - 280758 + G 70 -12.9 -3.28712 | gap 1, overlap 280712 GGCTGCGCGGCCGAC GGCGC-GTCGCGCCAACCGC GCC GCGGTTGTGGCGGCAGCGGC TTCTGCGCCCGCCGA Lcho_0265 280523 - 281725 + | hypothetical protein Lcho_0266 281825 - 282622 + | enoyl-CoA hydratase/isomerase TERM 156 282651 - 282669 + T 93 -17.4 -3.71848 | opp_overlap 282651 CGCCGCAATGACAAA CGCCCCGC AGT GCGGGGCG TTGTTCATGGCGCGA TERM 157 282669 - 282651 - T 100 -17.4 -4.05446 | opp_overlap 282651 CGCCGCAATGACAAA CGCCCCGC AGT GCGGGGCG TTGTTCATGGCGCGA Lcho_0267 283399 - 282692 - | putative thiol:disulfide interchange protein Lcho_0268 284640 - 283501 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 158 284680 - 284649 - R 93 -15.8 -3.89346 | opp_overlap 284649 284632 284656 CGGCCATTGTAGAAA GCGGCAACGGCGCC TTGT GGCGCCGTTTCAGC GGGGGAGGGGTGTGG TERM 159 284656 - 284673 + r 81 -14.1 -3.53012 | opp_overlap 284649, overlap 284649 284632 TGTAGAAAGCGGCAA CGGCGCC TTGT GGCGCCG TTTCAGCGGGGGAGG Lcho_0269 284935 - 284699 - | tail collar domain-containing protein Lcho_0270 285092 - 285964 + | MOSC domain-containing protein TERM 160 285978 - 285941 - f 74 -4.7 -4.57341 | gap 1 AAGGTCGGCCAAAAA GGCCGC-GGCACGGTCAG GTA CTGAGCGCCCCCAAGGCC GCCGCTTGCGGCGTC Lcho_0271 286128 - 287222 + | GTP-binding protein YchF Lcho_0272 287248 - 287481 + | hypothetical protein Lcho_0273 288492 - 287506 - | transglutaminase domain-containing protein TERM 161 287829 - 287861 + g 72 -15.6 -2.82635 | gap 1 CATGGGTCGCACCGC CGCCGACC-ACGCCG CCGG CGGCGTCGGTCAGCG TGTCGTCGTAGAGAT Lcho_0274 290096 - 288567 - | protease Do TERM 162 289730 - 289675 - G 85 -14.6 -3.81951 | gap 2, opp_overlap 289686 GTCGAGATGATGAAA CCCGAGCCCTGGCCGCGGAACGGCTG GTTCGG CTG-CGCGCCGCGGCC-GCGCCCGGG CTGGCCCGGCATGCC Lcho_0275 291537 - 290209 - | histidine kinase Lcho_0276 291638 - 291534 - | hypothetical protein TERM 163 291602 - 291632 + g 70 -10.2 -3.74693 | GGGCCGGCTTGGGAG CGGCCCGGCGCTCG TCC CGCGCGTCTGGCAG TTTCATGGGCTGGCG Lcho_0277 292342 - 291635 - | two component transcriptional regulator Lcho_0278 292767 - 292342 - | AsnC family transcriptional regulator Lcho_0279 292901 - 293950 + | ornithine cyclodeaminase Lcho_0280 295118 - 293979 - | twin-arginine translocation pathway signal TERM 164 294327 - 294361 + g 77 -17.2 -2.91728 | gap 1, overlap 294321 CCGGCCGTCCCACAG CGCCAGCAGCGGCGC CTCTGC GCGCTGCTGC-GGCG TGTCGTGTTCGGCCT TERM 165 296967 - 297022 + G 77 -15.5 -3.53012 | GTCATCGTGCTGGCC GGCAACGTGGGCGTCGAACTTG-CCGC CAAG GCGGCCGGGTTCGACGTCACCGT-GCC TTTCGCCCCGGGCCG Lcho_0281 295377 - 297548 + | catalase/peroxidase HPI Lcho_0282 298906 - 297560 - | metal dependent phosphohydrolase TERM 166 300959 - 300901 - g 95 -24.8 -2.62616 | gap 4, overlap 300913 CCACGCCGCAGACCA CGCCGCAGACGACCGCGCGCGCCAGCGCCG CCC CGGC-C-AGCGCGC-CGGT-GCCTGCGGCG GGCGGCGCGGCCGCG TERM 167 300969 - 300913 - g 71 -15.8 -2.62616 | gap 3, overlap 300901 CCACGCCGCAGACGA CCGCGCGCGCCAG-CGC-CGCCCCGGC CAGCGC GCCGGTGCCTGCGGCGGGCG-GCGCGG CCGCGCCGCTCAAGC Lcho_0283 299046 - 302096 + | hypothetical protein Lcho_0284 302588 - 302103 - | hypothetical protein Lcho_0285 303022 - 302627 - | hypothetical protein Lcho_0286 304092 - 303088 - | hypothetical protein Lcho_0287 304612 - 304124 - | endoribonuclease L-PSP Lcho_0288 306161 - 304617 - | lysyl-tRNA synthetase TERM 168 306051 - 306080 + g 91 -12.1 -4.58283 | opp_overlap 306038 GACCGCGGTGCCGGC CTCGCGGTGCTGC TGGC GCATCACGGCGAG TTTTTCGCGGCGTTC TERM 169 306214 - 306240 + H 78 -13.8 -3.21912 | TTGAATCTGCTGCGA TTTTAGGCGGCG GGG CGGCGCCTAAAA TTCGTGGCTTCGCCC Lcho_0289 306280 - 307338 + | oxidoreductase domain-containing protein Lcho_0290 307358 - 307942 + | acetyltransferase TERM 170 308183 - 308196 + G 77 -4.5 -4.67755 | GCATGAATTTCAGTG GGCGT GCCG ATGCC TTTTTGGATGGCTAT Lcho_0291 308023 - 309195 + | hypothetical protein Lcho_0292 309195 - 309716 + | hypothetical protein Lcho_0293 309732 - 310880 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 171 311570 - 311616 + G 73 -10.7 -3.86897 | gap 2, opp_overlap 311568, overlap 311595 GCGCTGCAGGACACG CTCGCGGTCGGCCTGATCGCCGC CAC GCTG-GGCCCGGCCG-CCGCGGG TTTCTGGGGCCTGGC Lcho_0294 310877 - 312157 + | polysaccharide biosynthesis protein Lcho_0295 312195 - 312881 + | acetyltransferase Lcho_0296 312893 - 313990 + | glycosyl transferase group 1 Lcho_0297 313987 - 315237 + | glycosyl transferase group 1 Lcho_0298 315240 - 316031 + | methyltransferase type 11 TERM 172 316039 - 316068 + F 70 -4.8 -4.37886 | opp_overlap 316036, overlap 316040 316040 CCAACTGAACTAGCA TGCTGCGCCGGC ACACGC GCCGGCACGCCG TTTTCTCCCACGTCA Lcho_0299 316103 - 317281 + | glutamine--scyllo-inositol transaminase Lcho_0300 317338 - 317943 + | sugar transferase TERM 173 319161 - 319212 + G 70 -9.9 -3.81287 | gap 1, opp_overlap 319135 319159 319161, overlap 319205 CCTTGCGCAACAACA CGCTCGGCACCTGGCGCG-CAGCC AGCGC GGCGGCCGAGGCGGGCGCCGAACG TTTCGTGCTGATCTC TERM 174 319212 - 319161 - g 70 -12.8 -3.38812 | gap 1, opp_overlap 319161 319205, overlap 319135 319159 CCTTGCGCAACAACA CGCTCGGCACCTGGCGCG-CAGCCA GCG CGGCGGCCGAGGCGGGCGCCGAACG TTTCGTGCTGATCTC Lcho_0301 317981 - 319852 + | polysaccharide biosynthesis protein CapD TERM 175 320741 - 320729 - g 71 -6.2 -4.19238 | overlap 320730 GCTCGAAGGCGAAAA GGCC GCCCA GGCC GCGCTGCCGCAGATC Lcho_0302 319917 - 320825 + | patatin Lcho_0303 323849 - 320880 - | excinuclease ABC, A subunit TERM 176 325774 - 325760 - H 75 -7 -4.42788 | GCCAATCCCAGAAAA CCGGTC GTA GTCCGG ATCGCAGTCTGCAAC TERM 177 326286 - 326304 + H 71 -3.8 -4.55798 | ATGCAAACCAAAGTC TCGCGATT GTC GGTCGTGA TTTTGGTTTGCCATC TERM 178 327069 - 327058 - H 72 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAATAGATCCT TERM 179 329769 - 329732 - H 100 -19.9 -3.14564 | opp_overlap 329732 329733, overlap 329737 TCAGGCTTCTATTAA TCCAAGCCCCCTTCCTC TCGC GAGGTAGGGGGCTTGGT ATTTTGGGCGGCAGA TERM 180 329732 - 329770 + H 100 -18.3 -4.07568 | gap 1, opp_overlap 329732 329737, overlap 329733 TCAGGCTTCTATTAA T-CCAAGCCCCCTTCCTC TCGC GAGGTAGGGGGCTTGGTA TTTTGGGCGGCAGAA TERM 181 329733 - 329768 + H 100 -23.4 -3.63744 | opp_overlap 329732 329737, overlap 329732 CAGGCTTCTATTAAT CCAAGCCCCCTTCCTC TCGC GAGGTAGGGGGCTTGG TATTTTGGGCGGCAG TERM 182 329764 - 329737 - H 89 -17 -3.20723 | opp_overlap 329733 329732, overlap 329732 CTTCTATTAATCCAA GCCCCCTTCCTC TCGC GAGGTAGGGGGC TTGGTATTTTGGGCG Lcho_0304 330640 - 330918 + | hypothetical protein Lcho_0305 331857 - 330958 - | pirin domain-containing protein Lcho_0306 332580 - 331951 - | NAD(P)H dehydrogenase (quinone) Lcho_0307 332719 - 333687 + | LysR family transcriptional regulator Lcho_0308 333698 - 334546 + | hypothetical protein Lcho_0309 335532 - 334561 - | hypothetical protein Lcho_0310 336269 - 335661 - | glutathione S-transferase domain-containing protein Lcho_0311 336435 - 336815 + | glutaredoxin Lcho_0312 336959 - 337771 + | putative signal transduction protein Lcho_0313 337875 - 339152 + | GTP cyclohydrolase II Lcho_0314 339163 - 340491 + | hypothetical protein Lcho_0316 342525 - 341023 - | ferredoxin-dependent glutamate synthase Lcho_0315 340534 - 341169 + | uracil phosphoribosyltransferase TERM 183 341873 - 341827 - Gf 86 -10.6 -4.21194 | overlap 341828 CTTGACCAGCGAAAA CCACGCCAGCGGGTGGCCGGTG CAC CACCGGATGCCCACCGGCTTGC CGCCCGAGAGCCGGC TERM 184 341872 - 341828 - Gf 76 -14.1 -3.12395 | overlap 341827 TTGACCAGCGAAAAC CACGCCAGCGGGTGGCCGGTG CAC CACCGGATGCCCACCGGCTTG CCGCCCGAGAGCCGG TERM 185 342933 - 342943 + G 71 -8.2 -4.07687 | overlap 342932 GCGCTGTGCGATCAG CGCG AGG CGCG TTTTGCGCCGGCGCT Lcho_0317 342759 - 344360 + | diguanylate cyclase TERM 186 344355 - 344399 + F 84 -11.9 -3.9461 | CGCCTGCCGGACGCC GCCTGAGCCGCCGCGGGCACG ATG CCTGCAAGGGGTGGCACAGGC TTCTTGTTCCACCCC Lcho_0318 344428 - 345717 + | N-isopropylammelide isopropylaminohydrolase TERM 187 345893 - 345874 - g 70 -9.3 -3.78934 | GCTGGCCGAGAAGAA GCTCGAG TACAAG CTCGAGC TTGACGACCCCTGGT Lcho_0319 345806 - 346426 + | glutathione S-transferase domain-containing protein Lcho_0320 346960 - 346433 - | hypothetical protein TERM 188 347110 - 347161 + H 71 -7.4 -4.11216 | overlap 347111 GGTGGCTCGTGTGAT GGTTCACGTT-GCGGGCCGGTTCG ACAGCG CGAACCGGCA-GCAAACGTGAAAA TTTTCCGGCTCCCCC TERM 189 347355 - 347372 + H 93 -4.7 -5.46698 | opp_overlap 347342, overlap 347342 347360 ATCCGGTGTCGGCCT CTCGACG GCGC CGCCGGG TTTTTTGCTTTTCGG Lcho_0321 347393 - 348526 + | homoserine O-acetyltransferase Lcho_0322 348523 - 349107 + | methionine biosynthesis protein MetW Lcho_0323 349450 - 349977 + | hypothetical protein Lcho_0324 350044 - 351537 + | peptidase M20 Lcho_0325 352647 - 351562 - | auxin efflux carrier TERM 190 351774 - 351750 - G 73 -15.7 -2.86164 | GCTGGAACGACGACA GCGGCGCGC CCAGCCC GCGCGCCGC CAGGCCGACCAGCAG TERM 191 352653 - 352710 + r 93 -13.9 -4.00042 | gap 1, opp_overlap 352638 TCGCCTGCATGGGCG GCGAGTATCGCCGTGCTGCCGCAGCGGC CGA GCCGCCCCGGCGCCCCGCCGAT-CGCGC TTATTTCCTGGCGCG Lcho_0326 353715 - 352711 - | TRAP dicarboxylate transporter, DctP subunit Lcho_0327 354329 - 353826 - | carbohydrate kinase Lcho_0328 354499 - 355524 + | LacI family transcription regulator Lcho_0329 356930 - 355539 - | L-serine dehydratase 1 TERM 192 355567 - 355579 + g 77 -10.5 -4.04295 | ATGTTCACCGCCAGC CCGCC GCG GGCGG TTTCCTTGTACTTGC TERM 193 355901 - 355917 + g 75 -5.8 -4.48987 | gap 1, overlap 355890 GGCAGCCGACCTCGG CGCC-GC TGAT GCTGGCG TTTTCCTTGTAGAGC TERM 194 356041 - 356015 - G 79 -15.8 -3.41693 | opp_overlap 356033 356037, overlap 356018 GTGAGTAGTAATGAA GCACCGCCGGCA CGA TGCCGGCCGCGC CGTTGGTCGGCGCGG TERM 195 356037 - 356079 + g 100 -14.1 -4.79174 | opp_overlap 356015 356018, overlap 356033 CGGCACGATGCCGGC CG-CGCCGTTGGTCGGCGCGG TCA CCACGC-GGCCACCGGCGGCG TTTTCTTCGTTGACT Lcho_0330 359038 - 356999 - | diguanylate cyclase/phosphodiesterase TERM 196 357065 - 357026 - G 70 -14.2 -3.14132 | gap 1 CGGCTCGTCGATGAA GCGGGCCTCGAACGCCGCC GCC GGCAGCGCCCG-GGCACAC AGGAAACCCTGGTAC TERM 197 359159 - 359179 + H 73 -13.9 -2.87344 | CCGTCAAGGTGTCGC CGCGGCGCC GCC GGCGCCCCG TGTGTCGGGGGGATG Lcho_0331 359370 - 359687 + | anti-sigma-factor antagonist Lcho_0332 359684 - 361954 + | CheA signal transduction histidine kinase Lcho_0333 361951 - 364113 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Lcho_0334 364124 - 364633 + | CheW protein Lcho_0335 364639 - 365481 + | MCP methyltransferase, CheR-type Lcho_0336 365484 - 366041 + | hypothetical protein Lcho_0337 366058 - 367128 + | response regulator receiver modulated CheB methylesterase Lcho_0338 367212 - 367790 + | NnrU family protein TERM 198 368610 - 368564 - g 79 -15.8 -3.35046 | opp_overlap 368567, overlap 368562 368566 CGACGTGCTGAAAGA GATCGTCGGCCCCGACGGCG TGTTCAC CGCCGTGGGCGACGACGACC AGAGCATCTACGGCT TERM 199 368605 - 368566 - g 82 -17.8 -3.24411 | opp_overlap 368567, overlap 368562 368564 ACGTGCTGAAAGAGA TCGTCGGCCCCGACGGCG TGTT CACCGCCGTGGGCGACGA CGACCAGAGCATCTA Lcho_0339 367875 - 369938 + | UvrD/REP helicase TERM 200 371572 - 371589 + G 76 -8.3 -4.17657 | opp_overlap 371569 371571 371574 GGCCCGCATCAAGAG CAGCGCG GCGG CGCGCGG TTTTCCGGTGTCATG Lcho_0340 370205 - 372079 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 201 372136 - 372166 + F 100 -20.6 -4.22375 | GTGCGCCGGTTTCGA TGGCCTGTGTCTAC ACC GTGGACACAGGCCA TTTGTTCGATCCTGT Lcho_0341 372330 - 374213 + | peptidase S8 and S53 subtilisin kexin sedolisin Lcho_0342 376251 - 374197 - | diguanylate cyclase/phosphodiesterase Lcho_0343 376351 - 376734 + | preprotein translocase, YajC subunit TERM 202 377595 - 377556 - g 73 -13.6 -3.31248 | gap 1, overlap 377568 CAACACCCTGCACAA CCGCATCAACGAGCTCGGC GTG GCCGAGC-CGGTGATCCAG CAGCAGGGCCTCGAC Lcho_0344 376828 - 378729 + | protein-export membrane protein SecD Lcho_0345 378754 - 379788 + | protein-export membrane protein SecF Lcho_0346 379848 - 382400 + | hypothetical protein Lcho_0347 382886 - 382434 - | hypothetical protein Lcho_0348 384094 - 382955 - | DNA protecting protein DprA Lcho_0349 385291 - 384107 - | peptidoglycan-binding LysM TERM 203 385758 - 385717 - g 76 -12.3 -3.76224 | gap 1, overlap 385718 385720 CGGCCAGCGAGGAAA TGATGGTCGGCGACGA-AGG CTG CCTGTCGGTGCCGACCATCT ACGACCGCGTCGAGC TERM 204 385757 - 385718 - g 73 -15.8 -2.8552 | gap 1, overlap 385717 385720 GGCCAGCGAGGAAAT GATGGTCGGCGACGA-AGG CTG CCTGTCGGTGCCGACCATC TACGACCGCGTCGAG Lcho_0350 385464 - 385979 + | peptide deformylase Lcho_0351 385976 - 386944 + | methionyl-tRNA formyltransferase TERM 205 387402 - 387354 - g 77 -14.6 -3.53811 | CGGACGGCGCCGAAA CGTCCGATGCCGCTGGCGC-CACC GGC GATGAGCGCCA-CGGCACCGCCCG GTCCGAGGCCGAGGC Lcho_0352 387029 - 387490 + | hypothetical protein TERM 206 388192 - 388223 + G 83 -17.2 -3.42354 | GCCACCTGGGTCTGC GCCGCCGTCGCCGC ATCG GCGGCCGTGGCGGC TTATGCCTTGCCGTA Lcho_0353 387589 - 388368 + | AzlC family protein TERM 207 388614 - 388661 + G 70 -12.8 -3.38046 | gap 3, overlap 388612 388615 CAGGGCCGGCTGCTC G-GCACGCTGGCCGACGCGCGAC TGCTC GGCGC-CGTCG-CCGGCGTGCTC TATTTCAGCTGGCGC TERM 208 388615 - 388659 + G 76 -16.5 -3.26031 | gap 2, overlap 388614 388612 AGGGCCGGCTGCTCG GCACGCTGGCCGACGCGCGAC TGCTC GGCGC-CGTCG-CCGGCGTGC TCTATTTCAGCTGGC Lcho_0354 388419 - 388748 + | branched-chain amino acid transport Lcho_0355 388819 - 390012 + | phosphoglycerate kinase TERM 209 390062 - 390077 + F 100 -11.8 -5.55664 | GTGACGCCAGCGAGG GCCGCC GAAA GGCGGC TTTTTTTCATCCTCG Lcho_0356 390155 - 390637 + | hypothetical protein Lcho_0357 390738 - 391043 + | DNA polymerase beta subunit Lcho_0358 391033 - 391371 + | hypothetical protein TERM 210 393461 - 393490 + G 76 -16.5 -3.26471 | gap 1, opp_overlap 393458 GCGGCCGAGGAAGTG CGCCG-CTTCGGCG TGC CGCCGAAGGTGGCG TTCCTGTCGCACTCG Lcho_0359 391574 - 393883 + | malate dehydrogenase Lcho_0360 393987 - 395417 + | pyruvate kinase TERM 211 395552 - 395598 + F 83 -9.3 -4.38154 | gap 1, opp_overlap 395552 GTGTCTCCCGACAGA CCGGCTGACCGTCGCGCGGC ATGATGGA GCCGGGCCGCGCTC-GCCGG TTTTGTCCACACTCT TERM 212 396650 - 396681 + G 76 -16.6 -2.70936 | gap 1, opp_overlap 396623 396643, overlap 396645 396643 CGACGAGATCGCCCG CC-GCTACGCCAGCG GCG CGCTGGCGCAGCAGG TGCTCTGATTCCTGC Lcho_0361 395625 - 396689 + | fructose-bisphosphate aldolase, class II TERM 213 396764 - 396738 - f 89 -19.4 -2.63596 | opp_overlap 396739 GCGCACGCGATATCA CGACGGCCCGCC TCT GGCGGGCCGTCT TGCTGTCCGCCCTAC TERM 214 396739 - 396763 + F 100 -22.9 -3.2614 | opp_overlap 396738 CGCACGCGATATCAC GACGGCCCGCC TCT GGCGGGCCGTC TTGCTGTCCGCCCTA Lcho_0362 396807 - 397715 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Lcho_0363 397741 - 398859 + | hypothetical protein Lcho_0364 399822 - 398884 - | thioredoxin domain-containing protein TERM 215 399663 - 399694 + g 74 -10 -4.07568 | opp_overlap 399670 TGTTGAGCTTGGCGA GCACGAAGCGGCCT TCGT AGGCGGCCTCGAGC TTTTCGAGCACCGGG Lcho_0365 399871 - 400365 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit Lcho_0366 400365 - 401585 + | phosphoribosylaminoimidazole carboxylase, ATPase subunit TERM 216 401957 - 401992 + G 82 -18.3 -3.14132 | gap 1, opp_overlap 401952 GGGCAATCGAGCGTC GGCCTGCGCTGCCCGG CGCAT CCGGTC-GCGCAGGCC TTGCTGCGCGCCGCC TERM 217 402529 - 402560 + G 78 -18 -2.64616 | CGAGTTGTTTGGTGT GCTGCGCGAGCTCG ATGA CGCGCTCGTGCAGC TGATCTGGGTCGAGC Lcho_0367 401600 - 402640 + | Sua5/YciO/YrdC/YwlC family protein TERM 218 402725 - 402738 + G 76 -3.7 -4.74103 | overlap 402724 CGCGCGCGCCCTGCG CTGCG CTGC CGCCG TTTTTGCGTTCACGG Lcho_0368 402690 - 403679 + | hypothetical protein Lcho_0369 405139 - 403715 - | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Lcho_0370 405334 - 406080 + | peptidase M22 glycoprotease Lcho_0371 406088 - 406594 + | ribosomal-protein-alanine acetyltransferase Lcho_0372 406581 - 407465 + | phage SPO1 DNA polymerase-related protein Lcho_0373 408567 - 407485 - | Mg2 transporter protein CorA family protein TERM 219 407974 - 407992 + g 70 -10.2 -3.7941 | CCAGTTCCGGTGGCG GCTGCGCG GGC CGAGCAGC TTGTTCTGCAGCGTG Lcho_0374 409591 - 408584 - | porphobilinogen synthase TERM 220 409815 - 409836 + r 100 -12.3 -5.52909 | gap 1, overlap 409816 GCGTTAAGGCTTTGC G-GCCCCAGC ACA GCTGGGGCTC TTTTTTTGCCTGTTC TERM 221 409816 - 409834 + r 100 -16 -4.38666 | overlap 409815 CGTTAAGGCTTTGCG GCCCCAGC ACA GCTGGGGC TCTTTTTTTGCCTGT Lcho_0375 410774 - 409947 - | hypothetical protein Lcho_0376 412268 - 410901 - | signal recognition particle protein Lcho_0377 412448 - 413215 + | cytochrome c assembly protein Lcho_0378 413212 - 413472 + | hypothetical protein Lcho_0379 413479 - 415563 + | histidine kinase Lcho_0380 415560 - 417128 + | two component, sigma54 specific, Fis family transcriptional regulator Lcho_0381 417125 - 417754 + | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD TERM 222 418007 - 418044 + F 93 -4.7 -5.40072 | gap 1, overlap 418008 CGCCACTCTGTTTCA CGCCTGCCTCGCGCTGAG TTT CTTGGTGCGTG-CGGGCA TTTTTTTGCCGCGAC TERM 223 418778 - 418758 - g 76 -3.2 -4.66163 | gap 1 ACGCTGATCGAAAAA GACCCGAGC TACA GC-CGCGTC ACTGCCCGCCTGCTG Lcho_0382 418116 - 420992 + | ribonucleoside-diphosphate reductase, alpha subunit Lcho_0383 421096 - 422304 + | ribonucleoside-diphosphate reductase TERM 224 422452 - 422478 + F 80 -8.6 -4.43189 | CTGTGGAACGCGGAT CACCCGGCCAGT CGA ATGGGCGGGGTG TTTTGTCAACTTGAT TERM 225 422551 - 422525 - f 70 -8 -3.96618 | gap 2, overlap 422540 422541 GGCAACTGCAAAGAA GGC-CG-CGGCC AAGAA GGCCGTCGCGCC GAAGCCCGCGGCGAA TERM 226 422609 - 422597 - f 71 -10.5 -3.61517 | ACCCGCGCTGAAGAA GGCCG CTC CGGCC AGGAAGGCTGCCGTG TERM 227 423028 - 422997 - f 81 -9.3 -4.21631 | AAGGCAGCCAAGAAA GCCGCAGCGCCCG CTGCCC CTGGCCCTGCGAC CTCGCCTGCAGCCAA TERM 228 423140 - 423157 + F 100 -14.1 -5.03314 | CGGTCCGATCATCCA GCCCGGC CATG GCCGGGC TTTTTTGCGCGTAGC Lcho_0384 423175 - 423552 + | hypothetical protein Lcho_0385 423982 - 423587 - | hypothetical protein Lcho_0386 424935 - 424027 - | ribokinase-like domain-containing protein Lcho_0387 425376 - 425260 - | hypothetical protein Lcho_0388 427894 - 425522 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Lcho_0389 428807 - 428049 - | glutamine amidotransferase class-II Lcho_0390 430107 - 428830 - | monooxygenase FAD-binding TERM 229 430544 - 430591 + G 71 -14.8 -3.01712 | gap 1 TCGCCAGCGGCATGG GCGCGGCCGAACTCGAGCGCGAG CTG CTCGCGCTCGACTG-GGAGGCGC TGTTCGCCAGCCGGG TERM 230 431266 - 431222 - g 75 -14.2 -3.53444 | gap 1 TCACGCTCGGCGAAA GCGGCGCCCAGGCGCTGCAGC CGCG GCTGCAG-GCGCTGGCGCTGC CCGCGCCCGAATGGG TERM 231 431918 - 431945 + G 89 -11.2 -4.56775 | overlap 431919 CGTGGGGCGAGTGGC GGCTGGGCGTGG TGCG CCAGGCCCAGCA TTTTTCGCCCGAGAT TERM 232 431919 - 431944 + G 75 -14.7 -3.33744 | overlap 431918 GTGGGGCGAGTGGCG GCTGGGCGTGG TGCG CCAGGCCCAGC ATTTTTCGCCCGAGA Lcho_0391 430207 - 432579 + | patatin Lcho_0392 433588 - 432596 - | LacI family transcription regulator Lcho_0393 434487 - 433690 - | GTP-binding protein HSR1-related Lcho_0394 434538 - 435167 + | cytochrome c class I TERM 233 435197 - 435215 + F 100 -16 -4.77036 | opp_overlap 435197 TGAACTGCCCCGAAA GGCCGGTC ACT GACCGGCC TTTTTGCTGGTGCGC TERM 234 435215 - 435197 - f 90 -16 -3.54459 | opp_overlap 435197 TGAACTGCCCCGAAA GGCCGGTC ACT GACCGGCC TTTTTGCTGGTGCGC Lcho_0395 435283 - 435672 + | hypothetical protein Lcho_0396 435763 - 436767 + | oxidoreductase molybdopterin binding Lcho_0397 436769 - 437494 + | ferric reductase domain-containing protein Lcho_0398 437561 - 438190 + | hypothetical protein Lcho_0399 438961 - 438197 - | Sel1 domain-containing protein TERM 235 438516 - 438549 + g 70 -10.1 -3.76492 | gap 1, opp_overlap 438478, overlap 438520 CGCAGCCAGGGCAGG GC-GCCGGCCGGGTCG CGT CGTCCGAGCCGGCCGC TTTCGTGCAGTTCGG Lcho_0400 439096 - 439764 + | lipoate-protein ligase B Lcho_0401 439839 - 440834 + | lipoic acid synthetase TERM 236 440993 - 441018 + G 75 -12.5 -3.58343 | gap 1 GTGTCCGGGGCGGTG CCAGCC-CGGGC GGC GCCCGCGGCGGG TTTGGCGATCGTCGG TERM 237 441206 - 441257 + G 71 -16.4 -2.65264 | gap 1, opp_overlap 441241 AGCCGCCTGATGCTC GCGCCGCGCTGGACGCCTT-CCGCG GCG CGCGACAAGCCGGCCCGCGCGCCGC TGCTCTACCTGCTCG Lcho_0402 440921 - 441844 + | hypothetical protein Lcho_0403 442753 - 441836 - | LysR family transcriptional regulator Lcho_0404 442958 - 443707 + | short-chain dehydrogenase/reductase SDR TERM 238 443724 - 443742 + F 81 -11 -4.07568 | CCACTGACCCATTTC CGGAACGC TGC GCGTTTCG TTTTGCGCAACACGC Lcho_0405 443860 - 444852 + | TRAP dicarboxylate transporter, DctP subunit Lcho_0406 444932 - 445462 + | tripartite ATP-independent periplasmic transporter DctQ Lcho_0407 445478 - 446737 + | TRAP dicarboxylate transporter, DctM subunit Lcho_0408 446756 - 447640 + | xylose isomerase domain-containing protein Lcho_0409 448678 - 447659 - | DeoR family transcriptional regulator Lcho_0410 449164 - 448715 - | RpiB/LacA/LacB family sugar-phosphate isomerase TERM 239 448898 - 448934 + g 79 -14.3 -3.61715 | GCGCTCGGCCGAGTA GGTGTCGTGCGCCTGCG CGG CGCGGATGCCCGGCACC TTGTTGGCCGAGATC TERM 240 449500 - 449481 - g 72 -11.4 -3.71848 | CCGCGTCATCAACAA CCCCGACC TGGT GGTCGAGG ACATGCTCACCGGCT TERM 241 450576 - 450518 - g 86 -20.1 -2.74144 | gap 1, overlap 450517 450521 CGGCCACCGCGAAAT CGACCGGGCCGGTGGCCGCACGCGCCGC CGCC GTGGCACGCACCGCCGTCGGCCCGG-CG CTGGCGCTGAACGGC TERM 242 450574 - 450521 - g 88 -21.5 -2.64803 | overlap 450517 450518 CCACCGCGAAATCGA CCGGGCCGGTGGCCGCACGCGCCGC CGCC GTGGCACGCACCGCCGTCGGCCCGG CGCTGGCGCTGAACG Lcho_0411 449455 - 451221 + | dihydroxyacetone kinase, L subunit Lcho_0412 451356 - 454517 + | transketolase TERM 243 454628 - 454647 + F 75 -10.6 -3.85698 | TACGGTACGCTGCGG CGGCCCGG TCTG CCGCGCCG TTTCTGCGGCGACGA Lcho_0413 454793 - 455476 + | TetR family transcriptional regulator Lcho_0414 455656 - 456216 + | tripartite ATP-independent periplasmic transporter DctQ Lcho_0415 456233 - 457513 + | TRAP dicarboxylate transporter, DctM subunit Lcho_0416 457631 - 458626 + | TRAP dicarboxylate transporter, DctP subunit Lcho_0417 458696 - 459145 + | 3-dehydroquinate dehydratase, type II Lcho_0418 459189 - 461096 + | xylose isomerase domain-containing protein Lcho_0419 461152 - 461988 + | shikimate dehydrogenase substrate binding subunit Lcho_0420 462513 - 462037 - | signal-transduction protein TERM 244 462361 - 462372 + g 80 -3.6 -4.85599 | overlap 462347 TTCGGTCACCAGCAG GGCG CCGA TGCC TTTTTCTGCCATCAG Lcho_0421 463482 - 462586 - | pirin domain-containing protein Lcho_0422 464283 - 463507 - | adenosylhomocysteine nucleosidase Lcho_0423 465024 - 464287 - | hypothetical protein Lcho_0424 466746 - 465061 - | AMP-dependent synthetase and ligase TERM 245 466699 - 466720 + g 70 -15.1 -2.84325 | overlap 466695 466692 TTGCGCCACGTTGAC CTCGGCCGG CACG CCGGCCGGG TAGTGTTTGAGCCAG TERM 246 466852 - 466872 + r 81 -12.5 -3.85539 | opp_overlap 466852 ACCGGCGCAAAAAAA GAGGCCGGC TGG GCCGACCTC TTTCCTGTGCGTGTC TERM 247 466872 - 466852 - R 100 -14.7 -5.40474 | opp_overlap 466852 ACCGGCGCAAAAAAA GAGGCCGGC TGG GCCGACCTC TTTCCTGTGCGTGTC Lcho_0425 468345 - 466921 - | NAD(P)(+) transhydrogenase (AB-specific) TERM 248 467083 - 467107 + g 73 -15 -3.14132 | GTAGGCCTCGAGGAT GGGCATGCCG TAGAT CGGCGTGCCC TTGGTCAGCGCGGCC Lcho_0426 468666 - 468346 - | NAD(P) transhydrogenase, subunit alpha part 2 Lcho_0427 469811 - 468669 - | NAD(P)(+) transhydrogenase (AB-specific) TERM 249 469704 - 469736 + g 90 -9.1 -5.04385 | CACGCCCGCGCCGCT CTGAATGCGCACGGT GTG ACCCTGCGCCTTGAG TTTTTTCGCCGTCTC Lcho_0428 469926 - 470426 + | NUDIX hydrolase Lcho_0429 471552 - 470410 - | glycosyl transferase family protein TERM 250 470926 - 470946 + g 75 -10.3 -3.99444 | overlap 470942 GTGCTTGTCGTGCGC CGCGGTGGC GAT GCGGCCGCG TTTGTGGGTCTTCTT Lcho_0430 471680 - 471919 + | zinc finger CDGSH-type domain-containing protein Lcho_0431 471958 - 473100 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Lcho_0432 474415 - 473111 - | fumarylacetoacetase Lcho_0433 474951 - 474412 - | glyoxalase/bleomycin resistance protein/dioxygenase Lcho_0434 476039 - 474963 - | 4-hydroxyphenylpyruvate dioxygenase TERM 251 475820 - 475846 + g 77 -10.8 -4.13945 | opp_overlap 475836 AGGCACACGGCCCGT GTTCGGCGGC GAAGTAG GCCGCCGGGC TTTTCGGGTCGCGGT Lcho_0435 476610 - 476086 - | hexapaptide repeat-containing transferase Lcho_0436 477631 - 476618 - | hypothetical protein Lcho_0437 478862 - 477684 - | L-carnitine dehydratase/bile acid-inducible protein F Lcho_0438 479877 - 478933 - | pyruvate carboxyltransferase Lcho_0439 480015 - 480971 + | LysR family transcriptional regulator TERM 252 480982 - 481021 + F 71 -10.6 -3.57792 | gap 1, overlap 480983 CCTGAAGGCGGCCGA GCGCGGTCGG-GCCGGCGC CGT GCGCTGGCGCCGATTGGGG TTTGCGAGTGGGTGC TERM 253 480983 - 481020 + F 71 -14.1 -2.74461 | gap 1, overlap 480982 CTGAAGGCGGCCGAG CGCGGTCGG-GCCGGCGC CGT GCGCTGGCGCCGATTGGG GTTTGCGAGTGGGTG Lcho_0440 481133 - 481936 + | IclR family transcriptional regulator Lcho_0441 482023 - 483222 + | 4-hydroxybenzoate 3-monooxygenase TERM 254 483696 - 483728 + G 72 -12.7 -3.53444 | gap 1 ACGGGCTCGATGCCG GCGTGCCCGGCGGC CAGAGC GCCGCCGC-CACGC TTTGGCAGACGCTGC Lcho_0442 483230 - 484984 + | sulphate transporter Lcho_0443 485051 - 485932 + | hypothetical protein Lcho_0444 485970 - 486392 + | 4-hydroxybenzoyl-CoA thioesterase Lcho_0445 487346 - 486408 - | pyruvate carboxyltransferase Lcho_0446 488733 - 487366 - | multi anti extrusion protein MatE TERM 255 490018 - 490006 - g 75 -10.5 -3.90112 | TCGGTGCCAAGGAAA CGGCG AAG CGCCG CTTGGGAATGAAAGG Lcho_0447 489558 - 490070 + | hypothetical protein TERM 256 490068 - 490095 + F 87 -4.2 -5.18866 | overlap 490088 TACGATAATCCGCAG TAGTTTGAGCAC GGTA GTACTAAAACTA TTTTATTTATTTGCA Lcho_0448 490114 - 490344 + | hypothetical protein Lcho_0449 490407 - 491237 + | Sel1 domain-containing protein Lcho_0450 491412 - 492782 + | chromate transporter Lcho_0451 493855 - 492803 - | hypothetical protein Lcho_0452 494382 - 493864 - | hypothetical protein Lcho_0453 495702 - 494464 - | N-acylglucosamine 2-epimerase TERM 257 495616 - 495593 - G 84 -11 -4.21989 | gap 1 TAGAAGTGGAAGAAA CCGCCGC-TCG GGT CGACGCAGCGG GCGTCGTAGAACGCC Lcho_0454 496810 - 495791 - | LacI family transcription regulator TERM 258 497010 - 497023 + H 82 -6.7 -4.66833 | overlap 497007 ACCCGCATCGATCGA CACGT CGTG ACGTG TTTTTGCGCTTCCGC Lcho_0455 497131 - 497292 + | hypothetical protein Lcho_0456 497640 - 497879 + | hypothetical protein Lcho_0457 498498 - 497929 - | YceI family protein Lcho_0458 499125 - 498553 - | YceI family protein Lcho_0459 499735 - 499166 - | cytochrome B561 Lcho_0460 500839 - 499880 - | MerR family transcriptional regulator TERM 259 500289 - 500231 - G 70 -9.4 -3.75153 | gap 1, opp_overlap 500246 GGCCTCGAACGGAAA CGTCGTCAGCACCACCCGCGGCC-GCG ACGCCG CGCTGGCTTCGGGTGACGCCGACATGG CGGTGCGCAGCACGG Lcho_0461 500997 - 501572 + | glutathione peroxidase TERM 260 501822 - 501852 + F 100 -18.3 -5.06414 | GTTGCCTTCCTGCCG CCCGCTGCACCCG CCACT CCGGTGCAGCGGG TTTTTCTTGGCGGGG TERM 261 502124 - 502154 + G 74 -7.4 -4.18018 | GCTGTTCGCCGCGCT CGACGTCGAGGTGG CGG CCTCCGAGATGTCG TTTTCGGTGCAGGCC TERM 262 502217 - 502246 + G 70 -4.1 -4.3898 | gap 1, overlap 502220 CCTCGACACCGTGTT CGCCCAGCGCCGCA ACC TGCTGCGCCCG-CG TTTTCTCGGCATGCT Lcho_0462 501876 - 503195 + | amine oxidase Lcho_0463 503192 - 504022 + | hypothetical protein Lcho_0464 504096 - 505361 + | cyclopropane-fatty-acyl-phospholipid synthase Lcho_0465 505445 - 506032 + | hypothetical protein Lcho_0466 506029 - 507315 + | sodium:galactoside symporter family protein Lcho_0467 507318 - 507866 + | putative lipoprotein Lcho_0468 507876 - 508649 + | short-chain dehydrogenase/reductase SDR Lcho_0469 508646 - 509095 + | hypothetical protein Lcho_0470 510064 - 509102 - | magnesium and cobalt transport protein CorA Lcho_0471 510510 - 510857 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 263 510883 - 510896 + F 83 -9.5 -4.39696 | opp_overlap 510873 510872 510879 510877, overlap 510879 ATAACGCAAGACAGG GCCCC GCAA GGGGC TTTGTTCATTTCGGG Lcho_0472 511078 - 511548 + | putative PTS IIA-like nitrogen-regulatory protein PtsN TERM 264 511879 - 511867 - g 80 -6.9 -4.68103 | overlap 511869 CGAACTGCAAGAAAA GCGCA TCT CGCGC ATCGTGACGCTCGAG Lcho_0473 511607 - 512584 + | HPr kinase TERM 265 512635 - 512619 - T 70 -10.9 -3.31144 | opp_overlap 512600 GCGTGACCCGGAGAA CGTCACT TCG AGTGACG GTGCGGGCAGGCGTC Lcho_0474 513052 - 512621 - | ferric uptake regulator family protein Lcho_0475 513161 - 513709 + | SmpA/OmlA domain-containing protein Lcho_0476 513721 - 514530 + | dihydrodipicolinate reductase TERM 266 514663 - 514701 + G 70 -12.5 -3.32844 | AAGAGCTGGGTGCTG GGCCGCGCACG-CCGCG ATCTGGC CGTGGTCGTGC-CGGCC TTCTGGCGTGCGCCC Lcho_0477 514543 - 515244 + | MotA/TolQ/ExbB proton channel Lcho_0478 515226 - 515666 + | biopolymer transport protein ExbD/TolR TERM 267 517075 - 517051 - g 80 -3.4 -4.77165 | gap 1, opp_overlap 517067, overlap 517052 517054 517055 TGGGCGAGAAGAAAA CCACCTGGCGC CTGC GCGACTGG-GG CATCAGCCGCCAGCG Lcho_0479 515745 - 518408 + | leucyl-tRNA synthetase Lcho_0480 518405 - 518977 + | rare lipoprotein B TERM 268 519494 - 519505 + G 83 -3.6 -5.02074 | overlap 519489 GGCGAGCCCGGCCAG CGCT GCCT GGCG TTTTTTGCCGACTGC TERM 269 519866 - 519856 - g 73 -6.8 -4.4078 | GGGCGTCAAGGAAAA GCTC TTC GAGC GCATCGTGCCCGGCC Lcho_0481 518987 - 520075 + | DNA polymerase III, delta subunit Lcho_0482 520250 - 520540 + | chaperonin Cpn10 TERM 270 521606 - 521572 - g 70 -4.8 -4.41047 | overlap 521575 521577 AGTGGGCAAGGAAAA CACCACCATCATCGAC GGC GCCGGTGCCGCTGGCG ACATCGAAGCCCGCG Lcho_0483 520586 - 522235 + | chaperonin GroEL TERM 271 522291 - 522272 - T 90 -16.4 -3.4285 | opp_overlap 522272 TCAGGCAAGTGAGAA GGGCCGCG GTGA CGCGGCCC TTTTTTATTGTCCGG TERM 272 522272 - 522291 + T 100 -16.4 -5.55769 | opp_overlap 522272 TCAGGCAAGTGAGAA GGGCCGCG GTGA CGCGGCCC TTTTTTATTGTCCGG Lcho_0484 524430 - 522307 - | FkbM family methyltransferase TERM 273 524504 - 524483 - R 100 -17.3 -5.63517 | opp_overlap 524498 CGCGGAAACAAAAAA GCGGCCGGA TCGC TCCGGCCGC TTCGGCATTGGGCTT Lcho_0485 524947 - 524537 - | fimbrial protein pilin Lcho_0486 526558 - 525113 - | TPR repeat-containing protein Lcho_0487 528555 - 526855 - | TPR repeat-containing protein Lcho_0488 529114 - 528779 - | hypothetical protein Lcho_0489 529236 - 531053 + | O-antigen polymerase Lcho_0490 531100 - 532614 + | putative transcriptional regulator Lcho_0491 533078 - 532644 - | molybdenum cofactor biosynthesis protein C TERM 274 534910 - 534862 - g 86 -18.8 -3.14344 | gap 1, overlap 534838 534837 CAGGCCCTCGACGAA GGCCGCGCGCCGGGCGACGAGAG CGGG CGCTGATCGCCC-GCGCGCGGCA GGCGTGCGGGCCGCG Lcho_0492 533233 - 534894 + | peptidase M48 Ste24p Lcho_0493 535296 - 534928 - | membrane protein of unknown function TERM 275 535359 - 535344 - R 100 -11.8 -4.72272 | TGCCCCCACGAAAAA GCCGCC CGAA GGCGGC TCGTCATGGCACGAC TERM 276 535361 - 535398 + r 78 -13.3 -3.53091 | CGCCCGAAGGCGGCT CGTCATGGCACGACCGG CTTA CCGGTCGATCCGTGCCG TTTACAGCAGCGCCT Lcho_0494 536293 - 535400 - | succinyl-CoA synthetase, alpha subunit TERM 277 536246 - 536272 + g 74 -7.3 -4.2461 | gap 1, overlap 536251 GCCGGTCTTGCCGGT GATGCCCTGCGT GATG ACGC-GGGTGTC TTTGTTGATGAGAAT Lcho_0495 537471 - 536311 - | succinyl-CoA synthetase, beta subunit Lcho_0496 538099 - 537626 - | regulatory protein RecX TERM 278 538007 - 538031 + g 71 -15 -3.01712 | overlap 538016 GGCATGCGGGGCCAG CTTGCGCGCC AGTTC GGCGCGCGAG TGTTCGCGCGCCGCC Lcho_0497 539200 - 538139 - | recA protein TERM 279 539856 - 539894 + G 77 -16.8 -2.88544 | gap 1, opp_overlap 539877 GGTGCTGCTGCAGCG CGC-CGGCCGGCTGGTC AGCAAG GACCAGCTGGTCGAGCG TCTGTGCGAGTGGGG Lcho_0498 539365 - 540036 + | two component transcriptional regulator Lcho_0499 540079 - 541635 + | histidine kinase Lcho_0500 542805 - 541651 - | rod shape-determining protein RodA Lcho_0501 544841 - 542802 - | penicillin-binding protein 2 Lcho_0502 545355 - 544849 - | rod shape-determining protein MreD Lcho_0503 546413 - 545475 - | rod shape-determining protein MreC TERM 280 545617 - 545593 - G 72 -15.7 -2.83715 | TCGAGCACCAGCACA TGGCGCACGCC GTC GGCCTGCGCCA CCGGCTGCAGCACGA Lcho_0504 547517 - 546468 - | cell shape determining protein MreB TERM 281 547505 - 547489 - G 70 -2.1 -4.56775 | overlap 547491 AGGTCGGTTGAAAAA TAGCGGC GCA GCAGCGA TCCGTAGAACATGGT TERM 282 547712 - 547675 - H 100 -16.3 -4.57569 | gap 1, opp_overlap 547674 547678 547681, overlap 547678 547679 CGATCCGGTTAAAAA CCACCAGCCGCCC-CGGC AAG GCCGCAGGCGGCTGATTG GCTTTCTCCGGGAGC TERM 283 547678 - 547709 + H 73 -12.2 -3.32997 | gap 1, opp_overlap 547675 547678 547679, overlap 547674 547681 TCCGGTTAAAAACCA CCAGCCGCC-CCGGC AAG GCCGCAGGCGGCTGA TTGGCTTTCTCCGGG TERM 284 547709 - 547678 - H 89 -16.6 -3.23708 | gap 1, opp_overlap 547678 547674 547681, overlap 547675 547679 TCCGGTTAAAAACCA CCAGCCGCCC-CGGC AAG GCCGCAGGCGGCTGA TTGGCTTTCTCCGGG TERM 285 547708 - 547679 - H 83 -17.9 -2.53903 | gap 1, opp_overlap 547678 547674 547681, overlap 547678 547675 CCGGTTAAAAACCAC CAGCCGCCC-CGGC AAG GCCGCAGGCGGCTG ATTGGCTTTCTCCGG TERM 286 547927 - 547952 + G 72 -3.9 -4.60487 | gap 1, opp_overlap 547912 547927, overlap 547927 547928 GCACGGCCGAGCAGA G-CGATCTGCTG GTC CAGCTGAACGGC TTTTTCGGCATCGTC Lcho_0505 547854 - 548153 + | glutamyl-tRNA(Gln) amidotransferase, C subunit Lcho_0506 548162 - 549655 + | glutamyl-tRNA(Gln) amidotransferase, A subunit Lcho_0507 549655 - 549774 + | hypothetical protein TERM 287 550218 - 550267 + G 82 -15 -3.59979 | overlap 550222 CGCGACGCCCAGGCC CAGGCCGCTCTCGAGGCCG-CCGC GCGT GCGGTCGGCTTCGAGT-CGGTCGG TTTCCAGTACGAGCC Lcho_0508 549771 - 551069 + | putative chaperone protein Lcho_0509 553317 - 551092 - | hypothetical protein Lcho_0510 553422 - 554390 + | hypothetical protein TERM 288 554978 - 555036 + G 70 -14.5 -2.88249 | gap 2 GGACTGCTGATCGGC CTGGGCGTCTGGCG-TGCGCTGCCGG-AG ACG CTGCCGGCCGCGCAGCGCCAGCGGCTCGA TCTGTCGCACCTCTG Lcho_0511 554429 - 555658 + | Bcr/CflA subfamily drug resistance transporter Lcho_0512 555767 - 556879 + | carbonate dehydratase TERM 289 556925 - 556944 + F 100 -9.2 -4.98531 | overlap 556927 CGCCGCCATGCGTCC GACCGCCC CGCG GGGCGGTA TTTTTCATTTGAAAC TERM 290 556927 - 556942 + F 85 -11.8 -4.11472 | overlap 556925 CCGCCATGCGTCCGA CCGCCC CGCG GGGCGG TATTTTTCATTTGAA Lcho_0513 557202 - 557642 + | MraZ protein Lcho_0514 557648 - 558625 + | S-adenosyl-methyltransferase MraW Lcho_0515 558622 - 558930 + | cell division protein FtsL TERM 291 560219 - 560175 - g 70 -9.8 -3.86897 | GGCATCGGCCAGAAA CCGCAGCTGGCGTTCCCG-GGC CTG GCCTCGGGC-CGCCTGCGGCCG TACAAGAGCTGGCGG Lcho_0516 558930 - 560774 + | peptidoglycan glycosyltransferase TERM 292 560939 - 560997 + G 72 -11.6 -3.64703 | overlap 560944 GCCTACGTCGGCGCG GCGCTGGCGGCCGGCGCCG-CGGCCT GCCTGATCG AGGCCGACGGCGCCG-CGGCCTTCGG TTTCGATGACGAGCG TERM 293 560944 - 560992 + G 83 -17.5 -3.29324 | overlap 560939 CGTCGGCGCGGCGCT GGCGGCCGGCGCCG-CGGCCT GCCTGATCG AGGCCGACGGCGCCG-CGGCC TTCGGTTTCGATGAC Lcho_0517 560774 - 562315 + | UDP-N-acetylmuramyl-tripeptide synthetase TERM 294 562426 - 562472 + G 75 -14.4 -3.53444 | gap 1, overlap 562401 562399 562458 562460 GTGCACAGCGACACC CGCTCGCTGCGCGCCGGCGAC CTGTTT GTGG-CGCTGCGCGGCGAGCG TTTCGACGCGCATGA TERM 295 563732 - 563722 - g 85 -8.2 -4.66163 | overlap 563723 563724 ATGGCGATGGAAAAA GCCG TGG CGGC GTTGCGCGAAGCCGC Lcho_0518 562312 - 563781 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase Lcho_0519 563771 - 564952 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 296 565714 - 565698 - g 71 -15.1 -3.07113 | opp_overlap 565693, overlap 565659 GACGACCTGATCGAA GGCGGCG GAC CGCCGCC GCACCTGATCCCTTC Lcho_0520 564960 - 566813 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase Lcho_0521 566872 - 568140 + | cell division protein FtsW Lcho_0522 568137 - 569249 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Lcho_0523 569246 - 570655 + | UDP-N-acetylmuramate--alanine ligase Lcho_0524 570652 - 571641 + | D-alanine--D-alanine ligase TERM 297 571768 - 571804 + G 75 -16.5 -3.06261 | GCCCTGCTCGCGGTG CTGGCCAGCGCGCTGGC CTG GGTAGCGCGCTCGCCGG TCTTCAGCCTTCGGC Lcho_0525 571669 - 572472 + | polypeptide-transport-associated domain-containing protein Lcho_0526 572509 - 573735 + | cell division protein FtsA Lcho_0527 573889 - 575106 + | cell division protein FtsZ TERM 298 575138 - 575163 + F 100 -19 -4.62069 | CACGGTTCCTTGCTT CCCCGGCGCC CGCCCT GGCGCCGGGG TTTTTGCAATGGCAG Lcho_0528 575241 - 576176 + | UDP-3-0-acyl N-acetylglucosamine deacetylase Lcho_0529 576199 - 576372 + | hypothetical protein Lcho_0530 578770 - 576416 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Lcho_0531 579389 - 578838 - | crossover junction endodeoxyribonuclease RuvC Lcho_0532 581070 - 579463 - | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 299 581116 - 581105 - R 100 -7.2 -5.86976 | overlap 581106 581107 TCAGAAAACAAAAAA GGCC CGCA GGCC CGGTGCGATGGGGCT Lcho_0533 581378 - 581142 - | Fis family transcriptional regulator Lcho_0534 582415 - 581375 - | NifR3 family TIM-barrel protein Lcho_0535 582521 - 583003 + | putative transmembrane protein Lcho_0536 583104 - 584618 + | carboxypeptidase Taq Lcho_0537 586636 - 584714 - | hypothetical protein TERM 300 586301 - 586243 - G 71 -15.9 -2.62184 | gap 1 CGTCGGCGTACAGCA CGACGCGCT-CGCCGAGGCGCCAGCC GCCGCTCA GGCCGGCGCGCCGGCCCAGCGCGCTG CGCCCGTAGCTCAGG Lcho_0538 586942 - 586655 - | hypothetical protein Lcho_0539 587111 - 588022 + | acetylglutamate kinase Lcho_0540 588092 - 588661 + | hypothetical protein Lcho_0541 588672 - 589373 + | pyrimidine 5'-nucleotidase Lcho_0542 589373 - 590017 + | TetR family transcriptional regulator TERM 301 590370 - 590331 - g 75 -12.8 -3.63515 | gap 1 CCGCACCGCCAACAA CGTGCTGCTGACCGGCGCC AAG GGCACCGGCAAG-AGCTCG CTGATCAAGGCCTGC Lcho_0543 590059 - 590991 + | hypothetical protein Lcho_0544 590984 - 591484 + | NUDIX hydrolase Lcho_0545 591707 - 591501 - | hypothetical protein Lcho_0546 592495 - 591740 - | hypothetical protein Lcho_0547 593190 - 592576 - | dephospho-CoA kinase Lcho_0548 594149 - 593202 - | peptidase A24A domain-containing protein Lcho_0549 595384 - 594158 - | type II secretion system protein Lcho_0550 597159 - 595435 - | type IV-A pilus assembly ATPase PilB TERM 302 596361 - 596382 + g 77 -6.5 -4.59109 | gap 1, overlap 596362 CGAACTTCAGCTTCA TGCG-GCCGT CCT GCGGCACGCG TTTTTCGGCGATGTC TERM 303 596688 - 596708 + g 71 -14.7 -3.05844 | opp_overlap 596667, overlap 596697 CGACGATCGATTCGA GCGCCTCGG TCG CCGAGGTGC TCTTGGCCTCGACGA Lcho_0551 597526 - 599430 + | heat shock protein Hsp90 Lcho_0552 600529 - 599447 - | aminoglycoside phosphotransferase Lcho_0553 601370 - 600561 - | hypothetical protein TERM 304 601535 - 601557 + r 100 -10.5 -4.90906 | opp_overlap 601530 601536, overlap 601536 GCCCCGAAAACGCAA ACGGCAGGC GCGCG GCCTGCCGA TTTTTCGTCTTGTGC TERM 305 601536 - 601556 + r 81 -14 -3.53459 | opp_overlap 601530 601536, overlap 601535 CCCCGAAAACGCAAA CGGCAGGC GCGCG GCCTGCCG ATTTTTCGTCTTGTG TERM 306 601556 - 601536 - R 88 -14 -3.92659 | opp_overlap 601536 601535, overlap 601530 CCCCGAAAACGCAAA CGGCAGGC GCGCG GCCTGCCG ATTTTTCGTCTTGTG TERM 307 601585 - 601608 + r 80 -5.2 -4.74767 | gap 1 TGCGCGAGTGCGTGT TCCGC-CGCCG CAC CGGTGTGCAGA TTTTCTATTGCTTCT Lcho_0554 602323 - 601622 - | GCN5-related N-acetyltransferase TERM 308 602492 - 602468 - R 100 -15.8 -5.59655 | opp_overlap 602464, overlap 602489 TAAACCAATAAAAAA GCCCCTTGCT GCGAA AGCAAGGGGC CTGCTGGTTGGCCCG Lcho_0555 603075 - 602524 - | single-strand binding protein Lcho_0556 603234 - 605213 + | ATP-dependent DNA helicase RecQ Lcho_0557 605340 - 606557 + | patatin Lcho_0558 607404 - 606559 - | hypothetical protein Lcho_0559 607950 - 607453 - | hypothetical protein Lcho_0560 609234 - 607993 - | acetate kinase TERM 309 608041 - 608064 + g 70 -13.8 -3.18264 | opp_overlap 608036, overlap 608054 GTCGAGCAGATGCCA GGCGGCGTCG GCGG CGACGCGGCC TTCGTCGGTCGGCAC TERM 310 608575 - 608623 + g 73 -13.8 -3.35679 | gap 2 GCCCTGGGCCGCGCA GGCGCTGGCGCCGCTGCCCAGGTG CGC CATCAGGAC-GCGGC-CGAGCGCC TTGTCGCTGCGGCGC Lcho_0561 609487 - 610506 + | basic membrane lipoprotein Lcho_0562 610517 - 612157 + | ABC transporter-related protein Lcho_0563 612154 - 613257 + | inner-membrane translocator Lcho_0564 613250 - 614224 + | inner-membrane translocator Lcho_0565 615777 - 614257 - | aldehyde dehydrogenase TERM 311 615181 - 615226 + g 70 -12.5 -3.29461 | gap 1, opp_overlap 615173 615174 GCCGAAACGGGCGAC GGCGC-GCTGCAGGGCCTTG AAGGTGG CCAGGCCCGACAGCGGCGCC TTCTCGGACGGCTTG Lcho_0566 616965 - 615808 - | saccharopine dehydrogenase TERM 312 615970 - 615941 - G 78 -8.5 -4.36914 | gap 1, overlap 615942 TCCTGGCCGACAAAA CCCGCACGC-GGCA GCT TGCCCGCGCGCAGC AGCTCGAACAGGCCG Lcho_0567 617211 - 617726 + | hypothetical protein Lcho_0568 617723 - 618043 + | hypothetical protein TERM 313 618048 - 618032 - T 72 -11.5 -3.53224 | overlap 618014 GACGCGGCGCTGAAA GCGCGCC AGT GACGCGC GCCGCTCAGATCTCG Lcho_0569 618806 - 618054 - | hypothetical protein Lcho_0570 618937 - 619554 + | hypothetical protein TERM 314 619744 - 619700 - g 90 -16.6 -3.59979 | gap 2 CTGGCGCAGGCCAAA CACCAGGTCGAGGCGCTGCGCA ACG TGCGC-GAGC-TCGACCTGATG GGCCGGCTGGCCGAG Lcho_0571 619586 - 621280 + | hypothetical protein TERM 315 622126 - 622147 + G 70 -13.7 -3.14564 | overlap 622135 CGGCCTGCAGTTCAC CACCGCCGC CCGC GCGGTGGTG TTCATCAACACCTCG Lcho_0572 621758 - 622732 + | hypothetical protein Lcho_0573 623349 - 622738 - | NUDIX hydrolase Lcho_0574 623452 - 625197 + | prolyl-tRNA synthetase Lcho_0575 625278 - 625949 + | lytic transglycosylase catalytic Lcho_0576 626553 - 625975 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Lcho_0577 626869 - 626558 - | glutaredoxin-like protein Lcho_0578 627673 - 626993 - | hypothetical protein Lcho_0579 628676 - 627834 - | protein-(glutamine-N5) methyltransferase, release factor-specific Lcho_0580 629755 - 628673 - | peptide chain release factor 1 TERM 316 629867 - 629891 + r 78 -12.7 -3.53012 | CGCTAGATCTCGCCG GCCGGCTCGGC CTT GCCGCGGCGGC TTTCGCCGCGCAGGA Lcho_0581 631161 - 629854 - | glutamyl-tRNA reductase Lcho_0582 631292 - 631573 + | hypothetical protein Lcho_0583 632523 - 631600 - | beta-lactamase domain-containing protein Lcho_0584 633943 - 632534 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 317 632910 - 632866 - G 79 -16.6 -3.01712 | gap 1, opp_overlap 632870, overlap 632870 GGCGCGGGCTGAAGA TGAAGCTGAACGACG-CGTCG AAAC CGATGTCGTCGATCAGCTTCA TGGTGCGGGCATGGT TERM 318 632870 - 632906 + g 70 -13.8 -3.21099 | gap 1, opp_overlap 632870 632866 CGGGCTGAAGATGAA GCTGAACGACG-CGTCG AAAC CGATGTCGTCGATCAGC TTCATGGTGCGGGCA TERM 319 634009 - 634055 + H 70 -7.3 -4.0031 | gap 1, opp_overlap 634019, overlap 634011 634013 634017 634018 TCAGAACGGACGATA CAA-AGAAAAACGGCCCGAGGT GGAG ACCTCGGGCCGGCTTCATGTTG TTGTTTGGTGGCGCT TERM 320 634017 - 634046 + H 78 -13.5 -3.51206 | opp_overlap 634019, overlap 634013 634011 634009 634018 GACGATACAAAGAAA AACGGCCCGAGGT GGAG ACCTCGGGCCGGC TTCATGTTGTTGTTT TERM 321 634018 - 634045 + H 81 -17 -2.69097 | opp_overlap 634019, overlap 634017 634013 634011 634009 ACGATACAAAGAAAA ACGGCCCGAGGT GGAG ACCTCGGGCCGG CTTCATGTTGTTGTT TERM 322 634044 - 634019 - H 100 -20.5 -5.42975 | opp_overlap 634018 634017 634013 634011 634009 CGATACAAAGAAAAA CGGCCCGAGGT GGAG ACCTCGGGCCG GCTTCATGTTGTTGT Lcho_0585 634347 - 634991 + | urease accessory protein UreG Lcho_0586 635207 - 634998 - | BFD/(2Fe-2S)-binding domain-containing protein TERM 323 635312 - 635294 - R 95 -8 -5.00616 | opp_overlap 635294 635295, overlap 635295 TTGCCGGGCAAAAAA TGGGGGCA TGC CGCCCCCG TTCGTGTGCTGCCCG TERM 324 635311 - 635295 - R 74 -11.5 -3.60048 | opp_overlap 635294 635295, overlap 635294 TGCCGGGCAAAAAAT GGGGGCA TGC CGCCCCC GTTCGTGTGCTGCCC Lcho_0587 635817 - 635341 - | bacterioferritin TERM 325 635900 - 635858 - R 86 -15.6 -3.28924 | overlap 635846 635865 GAGGGCTTCCGAGAA GCAGCAACCGCACCGAGACA GCG TGTCTCAGTGGAGCTGCGGC AGGTTGCGCAGCGCC Lcho_0588 636907 - 635885 - | peptidase S49 Lcho_0589 637340 - 636960 - | Rieske (2Fe-2S) domain-containing protein Lcho_0590 638040 - 637381 - | HAD family hydrolase Lcho_0591 639028 - 638060 - | RluA family pseudouridine synthase TERM 326 638515 - 638563 + g 71 -8.7 -4.15044 | gap 1, overlap 638517 638520 CTGCGTAGGTCTTGC CGGTGTCGCGCTGGCGGAACTG ATCCTG CAGCGCCGTCAGCGCG-CTGCG TTTCTTGGCCACCAG TERM 327 638643 - 638628 - G 73 -6.8 -4.3898 | gap 1, opp_overlap 638633, overlap 638629 ACCAGTTCCAGAAAA CGC-GCC TGC GGCCGCG CGCGCCGCAGTTGCT TERM 328 639038 - 639057 + H 84 -6.4 -4.82901 | gap 1, opp_overlap 639030, overlap 639039 CGACACAGGCGTTGA C-GCCGGCA CTT TGTCGGCTG TTTTTCTGCCGCCGG TERM 329 639039 - 639055 + H 78 -10.1 -4.03995 | opp_overlap 639030, overlap 639038 GACACAGGCGTTGAC GCCGGCA CTT TGTCGGC TGTTTTTCTGCCGCC TERM 330 639429 - 639459 + H 100 -14.1 -4.32034 | gap 2, overlap 639442 GCAGCATCCGTCCGA CAGGGGCGCCCGGCA GAT TGCCG--CGCCCCTG TTTTGATGGTGCTGC TERM 331 640225 - 640199 - g 70 -4.2 -4.41633 | overlap 640201 CAGGTCGAAAAAGAA GAGCGCGGCAAC AAG GGCGCGGCGCTG ACCACCTTCGTGTCG TERM 332 640311 - 640276 - g 72 -11.6 -3.63515 | GCTGATGCCCAACAA CCCGCGCGGCGGCGGC GTCA GCCGGCGCATCGAGGG CGAGCAGCGCGAAGA TERM 333 641748 - 641728 - g 71 -6.7 -4.1899 | overlap 641729 TGAGCGCACCGAAAA GGGCGAGCG TGG CGATCGCCG CGGTGGCCGTCGTGA TERM 334 642478 - 642426 - g 82 -14 -3.79747 | gap 2 CGACCCAGGACGAAA GC-GCCGCCGCACCGGTCGACG-CCG AGT CGGCCGAGGCCCAGCGCGACGGCCGC CGCCGTCGCCGCGGC Lcho_0592 639881 - 643057 + | ribonuclease TERM 335 643097 - 643134 + T 95 -12.7 -4.30719 | opp_overlap 643104, overlap 643104 GATCCGCGGCCCCCA GTAAAAAGCCGCCACGG TTCG CCGTGGCGGCTTTGTCG TTTCTTGTGGCGGCG TERM 336 643127 - 643104 - T 100 -19.6 -4.72272 | opp_overlap 643097 643104 GGCCCCCAGTAAAAA GCCGCCACGG TTCG CCGTGGCGGC TTTGTCGTTTCTTGT TERM 337 643104 - 643127 + T 100 -19.6 -4.21885 | opp_overlap 643104, overlap 643097 GGCCCCCAGTAAAAA GCCGCCACGG TTCG CCGTGGCGGC TTTGTCGTTTCTTGT Lcho_0593 644264 - 643161 - | Beta-N-acetylhexosaminidase Lcho_0594 644663 - 644265 - | holo-acyl-carrier-protein synthase Lcho_0595 645466 - 644660 - | pyridoxal phosphate biosynthetic protein PdxJ Lcho_0596 646292 - 645522 - | DNA repair protein RecO TERM 338 645743 - 645774 + g 70 -12.9 -3.40403 | GGCCGGCGACGCAGA CGCCCGCTTCGGC GTTCAG GCTGTGGCGGGCG TTGTCCTGCACCGGC TERM 339 646275 - 646295 + g 75 -12.5 -3.72324 | GAGCTGGGCCGGCGC GGCACGGCG GGT CGCCATGCC TTATTCGTAGCCGTA Lcho_0597 647342 - 646296 - | GTP-binding protein Era TERM 340 646563 - 646586 + g 72 -3.1 -4.58395 | gap 1 CGAGGTGTAGGGCAG CTCGT-CGCC GGTGA GGCGGAAGAG TTTTTCACGGATCAG Lcho_0598 648025 - 647339 - | ribonuclease III Lcho_0599 648425 - 648054 - | hypothetical protein Lcho_0600 649439 - 648471 - | signal peptidase I Lcho_0601 651264 - 649456 - | GTP-binding protein LepA TERM 341 651400 - 651377 - R 100 -5.2 -6.28967 | CAGAAACAAAAAAAA GGCACGCC CAAGAGAT GACGCGCC TTCCAACAAAAAGGT TERM 342 651534 - 651572 + r 86 -14.4 -3.794 | overlap 651536 TCCGGCCGCGGTGGG CCCTCGTCCGCCGGGCGT GGG GCGTCCGGCAGGCGGGTG TTTCGTCAGTTCAGG TERM 343 651536 - 651570 + r 90 -15.6 -3.48105 | overlap 651534 CGGCCGCGGTGGGCC CTCGTCCGCCGGGCGT GGG GCGTCCGGCAGGCGGG TGTTTCGTCAGTTCA Lcho_0602 653261 - 651711 - | protease Do Lcho_0603 654551 - 653388 - | putative sigma E regulatory protein, MucB/RseB Lcho_0604 655195 - 654548 - | anti sigma-E protein, RseA Lcho_0605 655829 - 655221 - | ECF subfamily RNA polymerase sigma-24 factor Lcho_0606 656313 - 655819 - | hypothetical protein Lcho_0607 657585 - 656341 - | 3-oxoacyl-(acyl-carrier-protein) synthase 2 TERM 344 656900 - 656932 + g 79 -17.7 -2.72344 | opp_overlap 656888 656887 AAGCCGTCGCGATCG CGATCCCAGGGGCGC GAT GCGGCCTTGGGGTCG TCATTGCGGGTCGAA TERM 345 657192 - 657178 - G 74 -2.7 -4.72272 | overlap 657186 657187 GGCGGGTACGAAAAA CGGGG AAATG CGCCG CGGCCCACGCTCGCG Lcho_0608 657872 - 657633 - | acyl carrier protein Lcho_0609 658768 - 658016 - | 3-oxoacyl-(acyl-carrier-protein) reductase Lcho_0610 659715 - 658777 - | malonyl CoA-acyl carrier protein transacylase Lcho_0611 660784 - 659792 - | 3-oxoacyl-(acyl-carrier-protein) synthase III Lcho_0612 661872 - 660781 - | fatty acid/phospholipid synthesis protein PlsX Lcho_0613 662208 - 662026 - | ribosomal protein L32 Lcho_0614 662875 - 662303 - | hypothetical protein Lcho_0615 662930 - 663547 + | maf protein TERM 346 663723 - 663707 - g 74 -9.3 -4.07568 | TTGGGTGGTTGAAAA CGCCCGC AGC GCGCGCG CCCTGCTGAAGCGGA Lcho_0616 663537 - 664334 + | putative transmembrane protein TERM 347 664340 - 664364 + T 85 -17.1 -3.06796 | GGCTGGATGAGTGCC CTGGGCCGGCG TCG TGCCGGCCCGG TTCGATCAGGTCGGC Lcho_0617 665809 - 664370 - | DEAD/DEAH box helicase domain-containing protein TERM 348 664884 - 664912 + g 80 -17.5 -3.21595 | overlap 664871 ACGTCGACCTCGCCG CGCTTGAAGGCGT CGA GCGCCTTCAGGCG TTCGTCCTGCGACTT TERM 349 665546 - 665564 + g 74 -8 -4.25104 | overlap 665553 665557 GCGTACCGGATGGCG CGCAGGCG ATG CGCTGGCG TTTTCGTGCCGCAGC Lcho_0618 666941 - 665820 - | glycosyl transferase family protein Lcho_0619 667197 - 668264 + | dTDP-glucose 4,6-dehydratase Lcho_0620 668280 - 669170 + | dTDP-4-dehydrorhamnose reductase Lcho_0621 669198 - 670079 + | glucose-1-phosphate thymidylyltransferase TERM 350 670126 - 670173 + G 75 -12.9 -3.71848 | gap 3 ATCCGCACCGACATC GCCGACGTGCTGATCATCGAACCC AAG GTGTTCGGTGA-C-GCACG-CGGC TTCTTCATGGAAAGC Lcho_0622 670102 - 670653 + | dTDP-4-dehydrorhamnose 3,5-epimerase Lcho_0623 670723 - 672168 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 351 672179 - 672200 + F 72 -10.9 -3.47573 | AATGACACGGGTCAG GCTCTTCGG CGTG TCGAAGAGC TTCTCATGTCGATCG TERM 352 672294 - 672320 + F 73 -5.9 -4.41047 | gap 1 TTGGCGTTGTTTCCA CGATCGTTGGCA TTGT TTCCA-CGATCG TTTTCGTTGCCAAAT Lcho_0624 672652 - 673578 + | NAD-dependent epimerase/dehydratase Lcho_0625 673587 - 673814 + | hypothetical protein Lcho_0626 673811 - 674074 + | hypothetical protein Lcho_0627 674216 - 675340 + | GDP-mannose 4,6-dehydratase TERM 353 675367 - 675410 + T 78 -14.4 -3.19463 | opp_overlap 675342 GTAGTGCCCGCCTTC GACGCGCTTCAGGCCGGCGG CTCT TCGGCGGCCGGCAGCACGTC TTCGTAGATGCTGGC Lcho_0628 675965 - 675375 - | hypothetical protein TERM 354 677070 - 677103 + G 74 -7.4 -4.16842 | gap 1, overlap 677074 677080 CGCCGGTGCGCGAGG TCATCCAGCACGGCC GCCAG GGCC-TGCTGGTCGA TTTCTTCGACGTCGC Lcho_0629 676061 - 677287 + | glycosyl transferase group 1 Lcho_0630 677703 - 677323 - | PilT domain-containing protein TERM 355 677672 - 677616 - G 78 -18.2 -2.62263 | gap 2, opp_overlap 677634 677634, overlap 677634 ACGGGTGGCACACGA CCAGGCCTGCTTCAAGCAGCGCCACGAG CCG CTCGTTGCGCTGCTTGAAGT--GCCCGA CCCATACGGAGGTGT Lcho_0631 677906 - 677700 - | hypothetical protein TERM 356 678178 - 678196 + H 85 -8 -4.64676 | opp_overlap 678179, overlap 678179 AACATCCATCAGACA AGCCCGCG CGA TGCGGGCG TTTTATTGCGCATAG TERM 357 678179 - 678195 + H 70 -11.5 -3.38324 | opp_overlap 678179, overlap 678178 ACATCCATCAGACAA GCCCGCG CGA TGCGGGC GTTTTATTGCGCATA Lcho_0632 678225 - 682472 + | Na-Ca exchanger/integrin-beta4 TERM 358 682497 - 682537 + T 83 -14.8 -3.17571 | gap 2, overlap 682526 ATTGATGTATCGAGG CCGGTTGATACGTGGCGCCC TGC GGGCGCC-CGT-TCGACGGG TTCAGTTCAGCGGTT Lcho_0633 684346 - 682544 - | hypothetical protein TERM 359 683113 - 683142 + g 70 -2.7 -4.56597 | opp_overlap 683097 683120, overlap 683114 683115 CTCCGTTCAGCCACG GTGACAAGGTGCA ATCG TGCACCTCGGCGG TTTTTCGAGCGGACA TERM 360 684398 - 684422 + r 77 -11.3 -3.78597 | TCGACGGGTCAATCG CTGGGAGGGTG AAT CACCCGCCCCG TTTCCGTTGATGAAT Lcho_0634 685224 - 684508 - | WecB/TagA/CpsF family glycosyl transferase Lcho_0635 686423 - 685212 - | glycosyl transferase group 1 Lcho_0636 687708 - 686416 - | hypothetical protein Lcho_0637 689129 - 687723 - | polysaccharide biosynthesis protein TERM 361 688353 - 688334 - G 70 -5 -4.38154 | AGATCGTCGAGAAAA TGCTCTGA ATGA TCACAGCA ATACCAGCAAAGCTG Lcho_0638 690256 - 689126 - | TDP-4-keto-6-deoxy-D-glucose transaminase Lcho_0639 690819 - 690253 - | hexapaptide repeat-containing transferase TERM 362 690303 - 690280 - G 82 -14.6 -3.61398 | opp_overlap 690279 TTCCTCTTTCAAGAA GGCCTGCTCA AGAT CGAGCAGGCC CTTCAGTCGGTCTTT Lcho_0640 691871 - 690819 - | 4-alpha-L-fucosyltransferase Lcho_0641 693212 - 691929 - | nucleotide sugar dehydrogenase Lcho_0642 694291 - 693209 - | UDP-N-acetylglucosamine 2-epimerase Lcho_0643 695592 - 694396 - | lipopolysaccharide biosynthesis protein TERM 363 695016 - 695002 - G 74 -2.7 -4.61482 | opp_overlap 695002, overlap 695003 TTTCTCAAAAAACAA GCGTC GCTGT GCCGC TTCCGTCACTGCAAG TERM 364 695136 - 695152 + g 78 -2.9 -4.84017 | overlap 695134 TCAGTCCGTCTTTGC CGGCC ACAATCC GGCTG TTTTTCTCGAGCCTT TERM 365 695340 - 695357 + g 72 -3.3 -4.48713 | CCGCAGCGCCTAGTA GTGCCGT GAGT GCGCCAC TTTGTTGTTGCTGCG Lcho_0644 695795 - 695589 - | hypothetical protein Lcho_0645 697177 - 696044 - | hypothetical protein TERM 366 696329 - 696360 + g 75 -15.8 -3.06696 | opp_overlap 696329, overlap 696330 GACCTGGCGCATGAA CTCGCGGCGCGCTT CCTC GAGCGCGGCGCGGG TCTGTTGCAGCAGCA Lcho_0646 697323 - 697622 + | DNA polymerase beta subunit Lcho_0647 697619 - 698101 + | hypothetical protein Lcho_0648 700471 - 698132 - | polysaccharide export protein TERM 367 698996 - 699040 + g 71 -14.9 -3.05384 | overlap 699000 CACCAGGTCGTGCGC CGGGTCCCGGTCGATCACGGC CTT GCCGAGGTTGAACGGGATCAG TTCCATCGCCACGCG TERM 368 701254 - 701267 + H 75 -3.7 -4.63218 | overlap 701255 TCCTTAAGAACGCTT ACGGG CTCC CCCGG TTTTGTTACAGACGG Lcho_0649 701460 - 704297 + | multicopper oxidase type 2 TERM 369 704324 - 704350 + F 93 -15.9 -3.89617 | gap 1 TGATGCCCTGACCCT CGAGGCGG-CGC GCAA GCGGCCGCCTCG TTTCCGTTTCTGCAT Lcho_0650 704383 - 705405 + | electron transport protein SCO1/SenC Lcho_0651 707284 - 705395 - | para-aminobenzoate synthase, subunit I TERM 370 706518 - 706480 - G 100 -23.8 -3.01712 | opp_overlap 706475 CCTCGGTCTCGAACA GCCGCGGCACCCGGACCG AGC CGGTGCGGGCGACGCGGC CGAGGTCGTTGCGCA TERM 371 706614 - 706639 + g 72 -11.7 -3.72576 | overlap 706606 GCCTGGTCGGCCGCG GGCTCGGCGGC GCGT GCGGCCGTGCC TTTCATCGGCCGGGC Lcho_0652 708229 - 707309 - | ATP:dephospho-CoA triphosphoribosyl transferase TERM 372 708705 - 708689 - g 79 -5.8 -4.7497 | gap 1, overlap 708690 708691 CGGACGCAGGAAAAA GC-GCGG CGAC CCGCTGC AGGAACGCATCGACT Lcho_0653 708666 - 709055 + | hypothetical protein Lcho_0654 709052 - 709705 + | hypothetical protein Lcho_0655 709752 - 712001 + | hypothetical protein Lcho_0656 712032 - 712568 + | small GTP-binding protein Lcho_0657 712636 - 713274 + | hypothetical protein Lcho_0658 713337 - 713699 + | roadblock/LC7 family protein Lcho_0659 713725 - 714219 + | putative PAS/PAC sensor protein Lcho_0660 714216 - 714962 + | ABC-type phosphate/phosphonate transport system periplasmic component Lcho_0661 715010 - 716188 + | hypothetical protein Lcho_0662 717049 - 716216 - | hypothetical protein TERM 373 716782 - 716750 - G 70 -12.6 -3.28712 | gap 1 CGGGCCTCGTGACAA GCCCGGCGCGGCGGC CGAT GCCGG-GCGCAGGGC CTGCATCGCCGGCCA Lcho_0663 718265 - 717042 - | ammonium transporter TERM 374 718227 - 718215 - G 79 -5.5 -4.7254 | AGCCTGCATGAAAAA CACCA AAG CGGTG CATATCCCGACCCAG TERM 375 718466 - 718447 - R 75 -4.2 -4.65916 | GGCACGTCAACAAAA CACGGATC TGCC GATCGGCG CCTGGCGTCGCGGTC Lcho_0664 719571 - 718666 - | cysteine synthase B Lcho_0665 719852 - 720454 + | rhomboid family protein Lcho_0666 720530 - 721684 + | PDZ/DHR/GLGF domain-containing protein Lcho_0667 722673 - 721705 - | NAD-dependent epimerase/dehydratase TERM 376 722175 - 722216 + g 72 -12.3 -3.72576 | gap 2 GCTGTTCGGCGTCGA CCCGG-CGA-CGTGCCCGC GCAGTG GCCGGCGCGGTCGGCCGGG TTTCATCGAAACGCG Lcho_0668 722757 - 723788 + | oxidoreductase FAD/NAD(P)-binding subunit TERM 377 723834 - 723810 - T 100 -21.5 -3.12351 | overlap 723813 GTGGCCCAGACGCAA GAAGGGCCCGC AAT GCGGGCCCTTC GAGGCGTCCACCCGG TERM 378 723831 - 723813 - T 93 -17.4 -3.70773 | overlap 723810 GCCCAGACGCAAGAA GGGCCCGC AAT GCGGGCCC TTCGAGGCGTCCACC Lcho_0669 724160 - 723858 - | ribosomal protein S20 TERM 379 724094 - 724131 + g 84 -2.7 -5.16151 | overlap 724098 TGAGCTTGACGTCCT GGCGG-GCGCGCTTGCG GCCCGA CGCAA-TGCGAACCGTC TTTTTCTTGGCTTTG Lcho_0670 724316 - 725878 + | integral membrane protein MviN Lcho_0671 725900 - 726772 + | hypothetical protein TERM 380 726799 - 726818 + F 77 -8.6 -4.30995 | overlap 726792 726795 CAACCTGAACCGATG CGGGATTT CCTA GAATCCCG TTCTTTTGTCGCGCA Lcho_0672 726837 - 727898 + | hypothetical protein Lcho_0673 727929 - 728606 + | DnaA regulatory inactivator Hda Lcho_0674 728603 - 729286 + | HAD family hydrolase TERM 381 730748 - 730698 - g 72 -11.6 -3.61398 | GGCGGCCGCCAAGAA GCGCCGCCGCCGTCGCAAGCCG GCCGCTG CGGCAGGCGAGGGTGGCAGTGC CGAGCCGGGCAGCGG Lcho_0675 729283 - 730779 + | poly(A) polymerase Lcho_0676 730799 - 731287 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Lcho_0677 731467 - 732114 + | hypothetical protein Lcho_0678 732128 - 733138 + | phosphate transporter Lcho_0679 733610 - 733125 - | hypothetical protein Lcho_0680 734167 - 733607 - | GCN5-related N-acetyltransferase Lcho_0681 734392 - 734652 + | ribosomal protein S16 TERM 382 734896 - 734871 - g 83 -16.9 -3.29144 | gap 1 GCAGGGGCCTGACAA CCGGCCGCGTCC CAA GGACGCG-CCGG CCTTGCCCCGGCTGC Lcho_0682 734710 - 735294 + | 16S rRNA processing protein RimM Lcho_0683 735328 - 736077 + | tRNA (guanine-N1)-methyltransferase TERM 383 736203 - 736188 - g 74 -4 -4.48713 | TTGAGCAAGAAGAAA TTGCTC GCCT GAACAA GGTCATCCCCGTCTT Lcho_0684 736154 - 736507 + | ribosomal protein L19 TERM 384 736509 - 736522 + F 71 -9.5 -3.73968 | opp_overlap 736498 AAAAGCTGTCCTGAT CGCGG TTTC CCGCG TTTCATGCCCGCTTT TERM 385 736537 - 736566 + F 95 -16.5 -4.11394 | opp_overlap 736543 736544, overlap 736538 736544 GTTTCATGCCCGCTT TGACAAGGCCGCC TTCG GGCGGCTTTGTCG TTTTCGCCCTAAGCT TERM 386 736538 - 736565 + F 88 -17.8 -3.06515 | opp_overlap 736543 736544, overlap 736537 736544 TTTCATGCCCGCTTT GACAAGGCCGCC TTCG GGCGGCTTTGTC GTTTTCGCCCTAAGC TERM 387 736544 - 736559 + F 95 -11.8 -4.208 | opp_overlap 736544 736543, overlap 736538 736537 GCCCGCTTTGACAAG GCCGCC TTCG GGCGGC TTTGTCGTTTTCGCC Lcho_0685 736589 - 737296 + | NUDIX hydrolase Lcho_0686 737358 - 738347 + | putative cobalamin biosynthesis transmembrane protein Lcho_0687 739101 - 738376 - | hypothetical protein TERM 388 739065 - 739039 - G 77 -4.3 -4.63527 | overlap 739042 CCAGCAGGTGAAAAA CCAGCCGAGCG CCAGC CAGTCGGCCAG TGGCAGGAGGGTGAT Lcho_0688 739835 - 739125 - | pirin domain-containing protein TERM 389 739389 - 739415 + g 76 -9.2 -4.1891 | CGCCGAGCCCTCGGG CGCGGCCACCAG GCG CAGCCGGCCGCG TTTGTCTTCGGCCGC TERM 390 740037 - 740001 - g 78 -17.9 -2.65442 | AGATGATGGACACCA TCGCGCGCACCGGCAGC TTC GCCGCGGCCGCGCGCGA ACTGGGCAAGGTGCC Lcho_0689 739946 - 740944 + | LysR family transcriptional regulator Lcho_0690 740952 - 741854 + | glutamate--tRNA ligase Lcho_0691 741988 - 742347 + | peptidylprolyl isomerase FKBP-type TERM 391 742411 - 742386 - T 100 -19.1 -5.4251 | opp_overlap 742386 CGCAGACAGAAAAAA GCCCGCTGAAC TTGC GTTCAGCGGGC TTTCTCTTTTGGCGG TERM 392 742386 - 742411 + T 100 -19.1 -4.45168 | opp_overlap 742386 CGCAGACAGAAAAAA GCCCGCTGAAC TTGC GTTCAGCGGGC TTTCTCTTTTGGCGG Lcho_0692 743833 - 742538 - | seryl-tRNA synthetase Lcho_0693 744911 - 743928 - | hydroxymethylbutenyl pyrophosphate reductase Lcho_0694 745363 - 744911 - | peptidylprolyl isomerase FKBP-type TERM 393 745498 - 745477 - g 75 -5.7 -4.56597 | opp_overlap 745489 745495, overlap 745479 CGCCCGCGCGAAAAA CTCCTGGCC CTGG GGCCGGCAG CCCTGGCCGACGCCG Lcho_0695 745438 - 746106 + | DNA repair protein RadC Lcho_0696 746133 - 746813 + | Smr protein/MutS2 Lcho_0697 747272 - 746844 - | globin TERM 394 747187 - 747223 + g 87 -15.7 -3.68351 | overlap 747188 GCGCGCACGCCGGCT TCGCCGCCGACGAGGTC GAA GGCCGTGGCGGCGGCGG TTTCGGTGGTGGGCG TERM 395 747188 - 747222 + g 76 -17 -2.80796 | overlap 747187 CGCGCACGCCGGCTT CGCCGCCGACGAGGTC GAA GGCCGTGGCGGCGGCG GTTTCGGTGGTGGGC TERM 396 747283 - 747324 + r 93 -17.4 -3.55761 | gap 1, opp_overlap 747287, overlap 747285 GGCATGGCAGGGCAA TGAACGATCGGGCGCACTG TAGTC CAGTGCGCCCGATCGA-CG TTTCAACGCTGGATC TERM 397 747285 - 747323 + r 90 -18.9 -2.73243 | opp_overlap 747287, overlap 747283 CATGGCAGGGCAATG AACGATCGGGCGCACTG TAGTC CAGTGCGCCCGATCGAC GTTTCAACGCTGGAT TERM 398 747321 - 747287 - R 100 -25.9 -3.35813 | opp_overlap 747285 747283 TGGCAGGGCAATGAA CGATCGGGCGCACTG TAGTC CAGTGCGCCCGATCG ACGTTTCAACGCTGG Lcho_0698 748148 - 747327 - | cobyrinic acid ac-diamide synthase Lcho_0699 748825 - 748145 - | diguanylate cyclase Lcho_0700 749221 - 750075 + | MCP methyltransferase, CheR-type TERM 399 750210 - 750234 + G 70 -2.8 -4.56597 | overlap 750188 GCGCAAGCCCGGCGA GGCCTCGT TCTTCTTCT ACGACGCC TTTTTCAAGGCCGAC Lcho_0701 750124 - 750783 + | hypothetical protein TERM 400 751836 - 751806 - g 81 -12.6 -3.95584 | opp_overlap 751828, overlap 751828 GCGCGATGAAGGAAA TGCGCGACGCCG GTGCCTA CAACGTCGCGCA GGACGAGGCCAGCTG Lcho_0702 750830 - 751984 + | response regulator receiver modulated CheB methylesterase Lcho_0703 753381 - 752008 - | oxygen-independent coproporphyrinogen III oxidase Lcho_0704 754027 - 753389 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Lcho_0705 754755 - 754030 - | ribonuclease PH TERM 401 754596 - 754609 + g 74 -2.3 -4.63218 | overlap 754581 754597 CGCCGCTGCCCTTCT TGTGC GGCG GCACC TTTTCTTCGACCGAG Lcho_0706 755789 - 754875 - | protein serine/threonine phosphatase Lcho_0707 756713 - 755835 - | serine/threonine protein kinase Lcho_0708 756832 - 757740 + | hypothetical protein TERM 402 757888 - 757863 - T 83 -6.1 -4.85599 | CCCACCCGACAAAAA CCTCTACAGCT TCAT AGCAGCAAAGG GACATGAACGAGCAG Lcho_0709 759427 - 758111 - | fumarylacetoacetase Lcho_0710 759737 - 759456 - | putative hydrolase Lcho_0711 760570 - 759737 - | hypothetical protein Lcho_0712 761552 - 760578 - | hypothetical protein Lcho_0713 762644 - 761568 - | porin TERM 403 762729 - 762746 + r 74 -12.7 -3.29043 | opp_overlap 762723 762726 TTTGACGAATGACCG CCTGGCC ACGA GGCCAGG TTCTGGGGGGACGTT Lcho_0714 763709 - 762786 - | SMP-30/gluconolaconase/LRE domain-containing protein Lcho_0715 764703 - 763732 - | hypothetical protein Lcho_0716 765821 - 764757 - | hypothetical protein TERM 404 765070 - 765111 + g 73 -15.2 -3.14132 | gap 2 TCCCAGCCGTCGAGG CCGCT-GCCGGTC-TCGTGC AGCC GCGCGACGTCCGGCGAGCGG TTCATCGCCAGCAGC TERM 405 765458 - 765414 - G 75 -14.9 -3.29461 | GAAGCCGTTGTAGAA GACCGCCTCGTCGACGCCG TCGCCAT CGGCGTCGAAGCGGCTGCC GACGTGGGCCAGGCT Lcho_0717 766750 - 765827 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Lcho_0718 767445 - 766747 - | dimethylmenaquinone methyltransferase Lcho_0719 768503 - 767523 - | hypothetical protein Lcho_0720 768631 - 769527 + | LysR family transcriptional regulator Lcho_0721 770133 - 769621 - | hypothetical protein Lcho_0722 771324 - 770218 - | hypothetical protein Lcho_0723 771530 - 772525 + | AraC family transcriptional regulator Lcho_0726 774950 - 773502 - | transcriptional regulator Lcho_0727 775018 - 775692 + | hypothetical protein Lcho_0728 775755 - 777182 + | cytochrome c oxidase accessory protein CcoG TERM 406 777652 - 777663 + G 74 -2.2 -4.62069 | gap 1, overlap 777642 777650 TTCCGCGCCATGATC G-CGC ACG GCGAC TTTTTCGAGTGGGCC Lcho_0729 777448 - 778077 + | guanylate kinase Lcho_0730 778132 - 778335 + | DNA-directed RNA polymerase, omega subunit Lcho_0731 778491 - 780800 + | (p)ppGpp synthetase I, SpoT/RelA Lcho_0732 781359 - 780790 - | transcription elongation factor GreB Lcho_0733 781601 - 782248 + | response regulator receiver protein Lcho_0734 782367 - 782750 + | response regulator receiver protein Lcho_0735 782852 - 783559 + | two component transcriptional regulator TERM 407 783848 - 783899 + G 85 -17.2 -3.55444 | gap 1, opp_overlap 783860, overlap 783835 TGCGGGTGCCGCTGG CGCTCGACGACAGCGCCGGCCGGCG CAT CGCCGCCTCGCCC-GTCTTCGAGCG TTTGCAGGATGACGG Lcho_0736 783595 - 784890 + | histidine kinase Lcho_0737 785326 - 784883 - | hypothetical protein Lcho_0738 785822 - 785370 - | hypothetical protein Lcho_0739 787099 - 785891 - | tryptophanyl-tRNA synthetase Lcho_0740 787186 - 787815 + | phosphoribosylglycinamide formyltransferase Lcho_0741 787852 - 789108 + | Fmu (Sun) domain-containing protein Lcho_0742 789307 - 790530 + | fatty acid desaturase Lcho_0743 790922 - 790596 - | hypothetical protein Lcho_0744 790941 - 791963 + | peptidase M23B TERM 408 793943 - 793898 - g 73 -13.9 -3.35679 | gap 1, opp_overlap 793912, overlap 793901 CCGCCGCATCGACAA CCAGCTGCGC-GGCCGCGCCGG CCG CCAGGGCGACCCGGGCAGCTCG CGCTTCTACCTGTCG TERM 409 793912 - 793946 + G 75 -14.8 -3.39803 | opp_overlap 793901 793898 ACCAGCTGCGCGGCC GCGCCGGCCGCCAGGG CGA CCCGGGCAGCTCGCGC TTCTACCTGTCGCTG Lcho_0745 792159 - 794918 + | preprotein translocase, SecA subunit Lcho_0746 794982 - 796211 + | arginine biosynthesis bifunctional protein ArgJ TERM 410 796246 - 796270 + T 100 -21.5 -2.90813 | opp_overlap 796249, overlap 796249 CGTCCGCGCCCTGAA CAACGCCCCGC CGA GCGGGGCGTTG TCGTTTGCGGGCCTC TERM 411 796249 - 796267 + T 93 -17.4 -3.60151 | opp_overlap 796249, overlap 796246 CCGCGCCCTGAACAA CGCCCCGC CGA GCGGGGCG TTGTCGTTTGCGGGC TERM 412 796267 - 796249 - T 93 -17.4 -3.61398 | opp_overlap 796249 796246 CCGCGCCCTGAACAA CGCCCCGC CGA GCGGGGCG TTGTCGTTTGCGGGC Lcho_0747 801080 - 796284 - | outer membrane adhesin like proteiin TERM 413 799053 - 799073 + g 91 -18.3 -3.61715 | TGCGCCGACGTCATC GGCCTGGCC GCC GGCCAGGCC TTCTTCGGACACCTG Lcho_0748 802300 - 801230 - | L-carnitine dehydratase/bile acid-inducible protein F Lcho_0749 803070 - 802297 - | glycerophosphodiester phosphodiesterase TERM 414 803415 - 803450 + G 88 -21.2 -2.62616 | gap 1 AGCTGCTGCTGCAAC TGCGCGCCGAGCG-CCG CAC CGGCCGCTCGGCACGCA TGCTCTACGAGGTGC Lcho_0750 803243 - 807172 + | FAD linked oxidase domain-containing protein Lcho_0751 808885 - 807179 - | hypothetical protein TERM 415 808441 - 808453 + g 73 -6.2 -4.33956 | CCGACGCCGCTTTCT GCGC TTTCT GCGC TTTCTGTGTTTTCGG TERM 416 809036 - 808998 - R 93 -13.9 -4.13282 | opp_overlap 809005, overlap 809000 809005 ACGACACCCGGAAAA GACAAAACCCGCCGGGA TCGGG TCCGGGCGGGTTTCGTG TCAGGAGCCGGGCTG TERM 417 809034 - 809000 - R 91 -16.5 -3.66256 | opp_overlap 809005, overlap 808998 809005 GACACCCGGAAAAGA CAAAACCCGCCGGGA TCGGG TCCGGGCGGGTTTCG TGTCAGGAGCCGGGC TERM 418 809005 - 809029 + r 86 -13.5 -3.83026 | opp_overlap 809000 808998 809005 CCGGAAAAGACAAAA CCCGCCGGGAT CGG GTCCGGGCGGG TTTCGTGTCAGGAGC TERM 419 809029 - 809005 - R 100 -12.8 -4.89567 | opp_overlap 809005, overlap 809000 808998 CCGGAAAAGACAAAA CCCGCCGGGA TCGGG TCCGGGCGGG TTTCGTGTCAGGAGC Lcho_0752 809224 - 809054 - | ribosomal protein L33 Lcho_0753 809475 - 809242 - | ribosomal protein L28 Lcho_0754 810701 - 809736 - | thioredoxin reductase TERM 420 810305 - 810276 - G 85 -4.9 -4.9725 | gap 1, overlap 810257 810278 ACCGCGATAGAAAAA GCCGTC-GCAGGTG GCG CAGCCGCTGACGCC GCGGCCCATGAAGGC TERM 421 810909 - 810857 - H 79 -2.2 -5.00616 | gap 4, opp_overlap 810869, overlap 810903 CTTGTCGTGAAAAAA TCCGGTGCGTTTTCCGTGTTCAGCGA GCAGT TGGCTGCACACGG-AA--GC-CCGGA TGCTGTAGCCGGACC Lcho_0755 811011 - 811679 + | Crp/FNR family transcriptional regulator Lcho_0756 811791 - 814202 + | cell divisionFtsK/SpoIIIE Lcho_0757 814232 - 814870 + | outer membrane lipoprotein carrier protein LolA TERM 422 816054 - 816009 - g 73 -14 -3.28712 | gap 2 CGCCTTCGTGCAGAA GGACGGCAC-CCGCGC-GGTGC CCCT GCACCTGCGCAATGCGCCGACC GCGCTGATGAAGCAG Lcho_0758 814921 - 816264 + | ATPase central domain-containing protein TERM 423 816500 - 816490 - f 72 -8.2 -4.11216 | overlap 816491 CCCGCATCTCGAAAA GGGC GGG GCCC CAAGCGCCGCGACAC Lcho_0759 816529 - 817464 + | inner-membrane translocator Lcho_0760 817481 - 818566 + | inner-membrane translocator Lcho_0761 818577 - 819353 + | ABC transporter-related protein TERM 424 819985 - 819967 - g 72 -11.7 -3.65812 | GCTGGTCGAACAGAA CGCCAGC CGGGC GCTGGCG ATCGCCGACCGCGGC Lcho_0762 819368 - 820093 + | ABC transporter-related protein TERM 425 820156 - 820137 - T 100 -13.6 -5.26875 | opp_overlap 820137 CGCTGAACGAAAAAA CGCCGACT CGAG AGTCGGCG TTTTGCTTGGCGTGA TERM 426 820137 - 820156 + T 100 -13.6 -4.42238 | opp_overlap 820137 CGCTGAACGAAAAAA CGCCGACT CGAG AGTCGGCG TTTTGCTTGGCGTGA Lcho_0763 823040 - 820188 - | phosphoenolpyruvate carboxylase Lcho_0764 823160 - 824128 + | porphobilinogen deaminase Lcho_0765 824145 - 824948 + | uroporphyrinogen III synthase HEM4 TERM 427 825306 - 825274 - g 70 -12.8 -3.36452 | gap 2 AGCCTCGAACAGGAA CTGGTGCGGCGCCAGC AGG GC-AGCGCCG-ACCAG TCTGCCGAAGCCCTC TERM 428 825478 - 825465 - g 71 -6.7 -4.25104 | CTCGCGTGACGAAAA TGTCG TCGC CGACA TCGAAGCAGCCATCC Lcho_0766 825178 - 826242 + | protein of unknown function DUF513 hemX Lcho_0767 826255 - 827502 + | HemY domain-containing protein TERM 429 827670 - 827634 - T 76 -9.5 -4.08706 | opp_overlap 827633 827638, overlap 827638 GCCGCACCATATAAA TCAACGGGTTAGCCT TCACAAG AGGCTAACCCGTTTG GCTTTGTGGGCTCGG TERM 430 827638 - 827666 + T 93 -15.4 -3.89215 | opp_overlap 827638 827634, overlap 827633 CACCATATAAATCAA CGGGTTAGCCTT CACAA GAGGCTAACCCG TTTGGCTTTGTGGGC TERM 431 827666 - 827638 - T 87 -14.7 -3.66365 | opp_overlap 827633 827638, overlap 827634 CACCATATAAATCAA CGGGTTAGCCT TCACAAG AGGCTAACCCG TTTGGCTTTGTGGGC Lcho_0768 829135 - 828122 - | integrase family protein Lcho_0769 830108 - 829128 - | integrase family protein Lcho_0770 831358 - 830105 - | integrase family protein Lcho_0771 831851 - 832639 + | hypothetical protein Lcho_0772 832632 - 835964 + | DEAD/DEAH box helicase domain-containing protein Lcho_0773 836683 - 836012 - | transposase Lcho_0774 837174 - 836683 - | transposase TERM 432 837479 - 837518 + r 76 -14.4 -3.14881 | gap 1, overlap 837469 TGAGGGTCACCGCAA GCTGACTTTCGCCGCGCTG GCT CGGT-CGGCCAAAGTCAGC TTCGTGGCGCGATTG TERM 433 837693 - 837724 + r 80 -13.9 -3.30619 | overlap 837666 837675 GCGACCGACCGGAGA CGCTGCTTATGGA AAGCTC TCCATAAGCAGTG TTATGCACAGTCCTT Lcho_0775 838839 - 837820 - | integrase family protein Lcho_0776 839833 - 838832 - | integrase family protein Lcho_0777 841107 - 839830 - | integrase family protein Lcho_0778 841266 - 841565 + | transposase IS3/IS911 family protein Lcho_0779 841562 - 842449 + | integrase catalytic region TERM 434 842483 - 842445 - f 81 -3 -5.00616 | overlap 842446 842447 842468 842469 TGGTGTCCGAAAAAA CTTGACCAGCACACTGTT CAT AACTGCGTGCTGTGCATA ACGCTGCACAGCAGC TERM 435 842728 - 842704 - f 77 -13.5 -3.30106 | overlap 842702 842700 CCGAACGCAAAGAGA GCCTGAGCGTC TGC GCCGCCCAGGC CGGCCCGCTGGCCGA TERM 436 843018 - 843069 + F 100 -20.2 -3.55444 | gap 1, opp_overlap 843031 843032, overlap 843020 AGACCGGCCCACCGC GCTCCCCCCACAAGCCCCCGTC-CT GTG GGCGAGGGGGACTTGTGGGGGGATC TTTCAGCGGTGGGCC TERM 437 843020 - 843067 + F 100 -21.4 -3.35597 | gap 1, opp_overlap 843031 843032, overlap 843018 ACCGGCCCACCGCGC TCCCCCCACAAGCCCCCGTC-CT GTG GGCGAGGGGGACTTGTGGGGGGA TCTTTCAGCGGTGGG Lcho_0780 843234 - 843719 + | single-strand binding protein Lcho_0781 843793 - 844680 + | hypothetical protein TERM 438 844724 - 844769 + F 93 -16.9 -3.85698 | gap 1, opp_overlap 844727 844730, overlap 844730 CAGATTCATCGCGCA C-AAGGACGCGCGTCGGCTCAA CGA TGGAGCCGGCGCGCGTTCGTCG TTTGTGGGCGCAGGG TERM 439 844765 - 844727 - f 93 -18.8 -3.30243 | opp_overlap 844724 844730, overlap 844730 ATTCATCGCGCACAA GGACGCGCGTCGGCTCAA CGA TGGAGCCGGCGCGCGTTC GTCGTTTGTGGGCGC TERM 440 844762 - 844730 - f 93 -19.1 -2.8294 | opp_overlap 844724 844730, overlap 844727 CATCGCGCACAAGGA CGCGCGTCGGCTCAA CGA TGGAGCCGGCGCGCG TTCGTCGTTTGTGGG TERM 441 844730 - 844762 + F 100 -21.3 -3.35467 | opp_overlap 844730 844727, overlap 844724 CATCGCGCACAAGGA CGCGCGTCGGCTCAA CGA TGGAGCCGGCGCGCG TTCGTCGTTTGTGGG TERM 442 844829 - 844798 - f 93 -13.6 -4.08767 | gap 1, overlap 844799 GGCAGGGTGCCAAAA CGGCTCGCCGGCCGC GCG GCGGCCGGCTCGC-G AGGCCCGGCAGCGAC TERM 443 844829 - 844799 - f 76 -13.8 -3.05046 | overlap 844798 GCAGGGTGCCAAAAC GGCTCGCCGGCCGC GCG GCGGCCGGCTCGCG AGGCCCGGCAGCGAC Lcho_0782 844970 - 845815 + | cobyrinic acid ac-diamide synthase Lcho_0783 845799 - 846761 + | parB-like partition protein TERM 444 846782 - 846803 + F 100 -15.1 -4.8622 | GACGTCATCGAGGAT GGGGCGCCG TTCG TGGCGCCCC TTTTTGATTGGCGCA Lcho_0784 847048 - 847620 + | hypothetical protein Lcho_0785 847637 - 848602 + | putative DNA relaxase/nickase, TraS/VirD2-like protein Lcho_0786 849089 - 848838 - | hypothetical protein Lcho_0788 850256 - 850888 + | NADP oxidoreductase coenzyme F420-dependent Lcho_0789 850972 - 851592 + | phospholipase/carboxylesterase Lcho_0790 852386 - 851667 - | ABC transporter-related protein Lcho_0791 853143 - 852397 - | ABC transporter-related protein Lcho_0792 854150 - 853143 - | inner-membrane translocator Lcho_0793 855083 - 854163 - | inner-membrane translocator Lcho_0794 856254 - 855094 - | extracellular ligand-binding receptor Lcho_0795 856647 - 856330 - | Rieske (2Fe-2S) domain-containing protein Lcho_0796 857138 - 856656 - | aromatic-ring-hydroxylating dioxygenase beta subunit Lcho_0797 858401 - 857142 - | Rieske (2Fe-2S) domain-containing protein Lcho_0798 859127 - 858432 - | fumarylacetoacetate (FAA) hydrolase Lcho_0799 860197 - 859151 - | gentisate 1,2-dioxygenase TERM 445 859264 - 859277 + g 74 -8.1 -4.25104 | TGTGCCATGAGGGCA CGACG AAGA CGTCG TTTTCCTGGAAGCGC Lcho_0800 861195 - 860209 - | oxidoreductase FAD-binding subunit Lcho_0801 861311 - 862240 + | LysR family transcriptional regulator TERM 446 863022 - 863000 - g 71 -6.2 -4.18018 | CGGCGCGATCGAAAA CCGCCTGC TGATCGC GCAGGCCG GCGAGCACCTGATCC Lcho_0802 862368 - 863651 + | Fis family transcriptional regulator Lcho_0803 863769 - 865514 + | glucose-methanol-choline oxidoreductase TERM 447 865597 - 865579 - g 70 -12.4 -3.35798 | ACTTCTGATCGACAA CCTGGCGC GCA GCGCCAAG GACGGCGCCACCTTC TERM 448 865759 - 865714 - g 70 -13.1 -3.30441 | gap 1 GAGCACCGCCTACAA GAGCTGGCGGCGCTCGGCGCCC AGC GAGCGCCGT-CGCATCCTGCTC AAGGCCGCCGATGCG Lcho_0804 865553 - 867004 + | aldehyde dehydrogenase Lcho_0805 868137 - 867082 - | LacI family transcription regulator TERM 449 868080 - 868126 + g 77 -4.3 -4.67982 | overlap 868066 TCATCGCCGAGACGC CGGCCTTCTCCGCGACGTC CTTGATCGT GACCTTGCTGTGAGGGCTG TTTTCTTGCATGGAA Lcho_0806 869501 - 868242 - | major facilitator transporter Lcho_0807 871175 - 869511 - | glycoside hydrolase family 3 protein Lcho_0808 873448 - 871247 - | TonB-dependent receptor TERM 450 873406 - 873384 - G 70 -4.1 -4.37886 | gap 1, overlap 873387 GCATTCGCGACAAAA GACGC-CTGG GCCG CCAGAGCACC CAGCACCGCGACCAC Lcho_0809 874473 - 873622 - | alpha/beta hydrolase fold Lcho_0810 875304 - 874477 - | hypothetical protein Lcho_0811 876529 - 875333 - | hypothetical protein TERM 451 875571 - 875624 + g 90 -15.9 -3.7941 | gap 1 AGCTCGGCCCGCTGT GGTG-CCGAGGTCGCGGCTTCGAGCG CCT TGATCTGCGCCGCGTCCTCGGCCACC TTGTTCTGGACCGTC Lcho_0812 876967 - 876539 - | biopolymer transport protein ExbD/TolR Lcho_0813 877388 - 876978 - | biopolymer transport protein ExbD/TolR Lcho_0814 878250 - 877453 - | MotA/TolQ/ExbB proton channel TERM 452 878188 - 878215 + g 70 -9.7 -3.85698 | TGCGGCGATGCTGGT CAGGCCGGCGC AGGCGA GCGCCAGCCAG TTTCTGGCGGCCGAG Lcho_0815 879011 - 878337 - | TonB family protein TERM 453 878928 - 878896 - G 76 -7.7 -4.37092 | overlap 878918 ATCTTCTTGACAAAA GCCCTGGCCAATC CCGAATT GATCGCCCAGAGC AGGGCGACATGCAAT TERM 454 879430 - 879390 - R 73 -9.5 -3.87815 | overlap 879391 TCTTATCCGCAGAAA GTGCTCTACGCCGGCAGCG GGC CGGTGACGGCGGCGAGCAG CTACGGCTGCCAGTA TERM 455 879429 - 879391 - R 71 -13 -2.92475 | overlap 879390 CTTATCCGCAGAAAG TGCTCTACGCCGGCAGCG GGC CGGTGACGGCGGCGAGCA GCTACGGCTGCCAGT Lcho_0816 880369 - 879500 - | IclR family transcriptional regulator Lcho_0817 881206 - 880451 - | short-chain dehydrogenase/reductase SDR TERM 456 880658 - 880678 + g 70 -14 -3.14132 | CGGGCAGATCGCGTT GGCGCGCA CGCCA TGCGCGCC TTCCTCGAAGGCGAG Lcho_0818 882550 - 881321 - | L-carnitine dehydratase/bile acid-inducible protein F Lcho_0819 883428 - 882550 - | hypothetical protein Lcho_0820 883666 - 884088 + | glyoxalase/bleomycin resistance protein/dioxygenase Lcho_0821 884121 - 885179 + | TRAP dicarboxylate transporter, DctP subunit Lcho_0822 885208 - 887094 + | TRAP C4-dicarboxylate transport system permease DctM subunit TERM 457 887244 - 887288 + G 73 -13.5 -3.40403 | CCGCCCGGCGACTGG CCGCATCCGGCATCGAGCCCG TGA TGGGCTCGATGGACGATGCCG TTCTGCTCGCCCGCG Lcho_0823 887123 - 888046 + | NAD-dependent epimerase/dehydratase Lcho_0824 888058 - 888828 + | short-chain dehydrogenase/reductase SDR Lcho_0825 888870 - 889280 + | cupin 2 domain-containing protein Lcho_0826 889313 - 889636 + | antibiotic biosynthesis monooxygenase Lcho_0827 889633 - 890184 + | hemerythrin HHE cation binding domain-containing protein Lcho_0828 891118 - 890213 - | LysR family transcriptional regulator Lcho_0829 891261 - 891464 + | 4-oxalocrotonate tautomerase Lcho_0830 891892 - 891479 - | glutathione-dependent formaldehyde-activating GFA TERM 458 891658 - 891646 - G 83 -3.3 -5.02074 | opp_overlap 891646 CCACGTCCGAAAAAA TGGGG GAG CCGCA GTTTGGACAGAAATG Lcho_0831 893147 - 891945 - | beta-ketoadipyl CoA thiolase TERM 459 892817 - 892833 + g 73 -15.1 -3.14132 | overlap 892830 CGCCGGCGATCATCA GGCCGGC CTC GCCGGCC TTGATGGCGCGGGCG Lcho_0832 893814 - 893152 - | 3-oxoacid CoA-transferase, B subunit Lcho_0833 894526 - 893825 - | 3-oxoacid CoA-transferase, A subunit TERM 460 894184 - 894170 - G 75 -12.8 -3.61398 | opp_overlap 894180 CGTGGCGGTGAAGAA GCCGGC GAT GCCGGC GCCCGCGGCGCGGAT Lcho_0834 895413 - 894529 - | intradiol ring-cleavage dioxygenase Lcho_0835 895531 - 896454 + | LysR family transcriptional regulator Lcho_0836 896638 - 896946 + | stress responsive alpha-beta barrel domain-containing protein Lcho_0837 896949 - 898019 + | iron-containing alcohol dehydrogenase TERM 461 898457 - 898405 - g 71 -8.5 -4.07568 | gap 3, overlap 898406 CGTGCTGTGCGAAAA GC-CGGCCG-GCCG-CAATGCGGC CGATGTAC GCCGCATCGTCGACGCGGTCGAGC GCACCGGCGGCATCC Lcho_0838 898088 - 899191 + | oxidoreductase domain-containing protein TERM 462 899716 - 899679 - g 82 -15 -3.68936 | gap 1 CACCAACGTCAACAA GATCGACACCG-CGATG GCCAT CATCGCCGGTGCCGACC AGCCTAACGGCGGCA Lcho_0839 899188 - 900066 + | xylose isomerase domain-containing protein Lcho_0840 900087 - 901082 + | inositol 2-dehydrogenase TERM 463 901142 - 901123 - f 75 -12.1 -3.53012 | TCTTTCCCTTCCAAA CCCCGGG GGCCGG CCCGGGG TTCAGGTCGACTCGT TERM 464 901374 - 901323 - g 72 -13 -3.53444 | gap 1, overlap 901324 901363 CCATCCGCTTCGAAA GCC-GCGACGCACCCTTCTTCATCG ACG CGCTGAAGAAGAAGGCCCCGCAGGC CAAGGTGATCGTGCA Lcho_0841 901202 - 902269 + | ABC sugar transporter, periplasmic solute-binding protein TERM 465 902288 - 902313 + F 82 -3.8 -5.00884 | opp_overlap 902272, overlap 902289 902290 CTGGGCGAGCAGCCC AAGGGGTGGC AGTCTC GCCGCCCCAA TTTTTTCCGAGAGGT Lcho_0842 902334 - 903149 + | ABC transporter-related protein Lcho_0843 903176 - 904399 + | inner-membrane translocator Lcho_0844 905621 - 904419 - | beta-ketoadipyl CoA thiolase Lcho_0845 907742 - 905679 - | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 466 906040 - 906064 + g 70 -4.1 -4.36914 | opp_overlap 906054 GCGCGTTTGCCATCG GCGTAGCGG TAATAGC CCGCGCCGC TTTTCTGGCCGAGCC TERM 467 906754 - 906769 + g 76 -11.8 -3.84648 | GCGATACGCTGGCGT CCGCGC GCGA GCGCGG TTTCATCCTGTTCGA Lcho_0846 909018 - 907771 - | L-carnitine dehydratase/bile acid-inducible protein F Lcho_0847 910185 - 909025 - | acyl-CoA dehydrogenase domain-containing protein Lcho_0848 910579 - 910214 - | cytochrome c class I Lcho_0849 912173 - 910587 - | Pyrrolo-quinoline quinone Lcho_0850 912551 - 912192 - | hypothetical protein Lcho_0851 914231 - 912555 - | Pyrrolo-quinoline quinone TERM 468 914281 - 914309 + r 90 -15.4 -3.73709 | gap 1, overlap 914297 CCATTAGTGTTGTGT CAGGGTCACGTCG ATTC CGACGTG-CCCTG TTCTTCGGCTTTTCT Lcho_0852 915438 - 914341 - | luciferase family protein Lcho_0853 916072 - 915515 - | flavin reductase domain-containing protein Lcho_0854 916412 - 918391 + | Fis family GAF modulated sigma54 specific transcriptional regulator Lcho_0855 918572 - 919789 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase Lcho_0856 919833 - 921272 + | aldehyde dehydrogenase Lcho_0857 921324 - 922073 + | electron transfer flavoprotein alpha/beta-subunit Lcho_0858 922076 - 923005 + | electron transfer flavoprotein alpha subunit Lcho_0859 923077 - 923967 + | periplasmic component of the Tol biopolymer transport system Lcho_0860 925174 - 924059 - | hypothetical protein Lcho_0861 925906 - 925214 - | OmpA/MotB domain-containing protein Lcho_0862 927958 - 925925 - | TRAG family protein Lcho_0863 929061 - 927955 - | P-type DNA transfer ATPase VirB11 Lcho_0864 930560 - 929082 - | conjugation TrbI family protein TERM 469 930408 - 930452 + g 86 -19.2 -3.16267 | TGAACGCTGGGCCCG CGCCTGCGCGGCGACGTCGG GGATG CCGGCTTCGCCGGGCAGGGG TTCGATCTGGTTCGG Lcho_0865 931500 - 930553 - | conjugal transfer protein TrbG/VirB9/CagX Lcho_0866 932369 - 931497 - | VirB8 family protein Lcho_0867 933101 - 932385 - | type IV secretion system family protein Lcho_0868 934228 - 933191 - | TrbL/VirB6 plasmid conjugal transfer protein Lcho_0869 934658 - 934239 - | hypothetical protein Lcho_0870 937147 - 934655 - | type IV secretion/conjugal transfer ATPase TERM 470 936576 - 936604 + g 75 -12.4 -3.67597 | gap 1 TGCGGTCCGAAGCCG CGCAGCACGC-GG TCGA CCAGCGCGCTGCG TTCTTCCATCACCCG Lcho_0871 937463 - 937131 - | type IV secretory pathway VirB3 family protein Lcho_0872 937772 - 937482 - | conjugal transfer protein TrbC Lcho_0873 938303 - 937794 - | lytic transglycosylase catalytic Lcho_0874 938878 - 938318 - | hypothetical protein Lcho_0875 939759 - 938995 - | LuxR family transcriptional regulator Lcho_0876 940183 - 939833 - | hypothetical protein Lcho_0877 940955 - 940530 - | hypothetical protein Lcho_0878 941264 - 942208 + | fatty acid desaturase Lcho_0879 942205 - 943455 + | hypothetical protein Lcho_0880 944378 - 943524 - | LysR family transcriptional regulator Lcho_0881 944832 - 945140 + | hypothetical protein Lcho_0882 945390 - 945163 - | phage transcriptional regulator, AlpA Lcho_0883 945558 - 946538 + | integrase catalytic region Lcho_0884 948333 - 946909 - | carbohydrate kinase FGGY Lcho_0885 949357 - 948356 - | alcohol dehydrogenase Lcho_0886 950205 - 949423 - | deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase Lcho_0887 950483 - 951244 + | GntR family transcriptional regulator Lcho_0888 951408 - 951569 + | hypothetical protein Lcho_0889 951782 - 953089 + | extracellular solute-binding protein Lcho_0890 953207 - 954049 + | binding-protein-dependent transport systems inner membrane component Lcho_0891 954046 - 954876 + | binding-protein-dependent transport systems inner membrane component Lcho_0892 954895 - 955968 + | ABC transporter-related protein Lcho_0893 955998 - 957638 + | Glycerone kinase Lcho_0894 957669 - 959072 + | mannitol dehydrogenase domain-containing protein Lcho_0895 959122 - 960030 + | AraC family transcriptional regulator TERM 471 960385 - 960356 - T 77 -13 -3.38812 | overlap 960354 GCGGTTCGAACAATA CTGACTTACCGA TCAACC TCGGTAAGCCAG CGCGTAGTCCGGCTA Lcho_0896 961652 - 960432 - | filamentation induced by cAMP protein Fic TERM 472 961431 - 961448 + g 76 -3.3 -4.67943 | GTCCCGCCTCAGCGC CTGCTCG ATCT CGAACGG TTTTGTGTGTTGACC TERM 473 961719 - 961730 + r 81 -3 -5.00616 | overlap 961710 CTGTTTTTGGACGAC TGTT GGCC AACA TTTTTTCGCAGCCGG Lcho_0897 963556 - 961895 - | integrase family protein TERM 474 963787 - 963815 + H 86 -13.2 -3.89215 | opp_overlap 963787 963783 CACCATTTAAATCAA CGGGTTAGCTTC CACAA GGAGCTAGCCCG TTTGGCTTTGTGGGC TERM 475 963847 - 963867 + H 74 -5.4 -4.4715 | gap 1, overlap 963840 CGCCACGGCTGTTGC CCCA-CGCG GGGC TGCGATGGG TTTTGTGGCTTGCCG Lcho_0898 963986 - 964120 + | hypothetical protein Lcho_0899 964166 - 964819 + | phosphoribosyltransferase TERM 476 964804 - 964826 + F 71 -7.6 -4.11216 | CGCCCATCTGTCGAC CGGACGCTCA CGA TGAGCCCCCG TTTTGCCGATCGCGC Lcho_0900 964816 - 965424 + | phosphoribosyltransferase Lcho_0901 966148 - 965441 - | two component LuxR family transcriptional regulator Lcho_0902 967674 - 966145 - | PAS/PAC sensor signal transduction histidine kinase TERM 477 966322 - 966278 - G 93 -17.9 -4.15565 | gap 1 GTGACCAGCGCAAAA CGGCC-GCCGAGCATGCGGG TGCGCT CGCGCATGCCCAGCAGGCCG TAGGAGCCCTCGCGC TERM 478 967893 - 967939 + H 72 -2.9 -4.60924 | gap 2, overlap 967873 CTTGATTCAGATCAA TCGGCCTGTTGTCAGCCAGTCGC CAG GCG-CTTGCGTGCAGC-GGTCGA TTTTTCGGCAATTTC TERM 479 968943 - 968914 - g 91 -18.7 -3.28712 | gap 1 TCTGCGGGTCGACAA CCG-CGAGGTCGAG ATC CTCGACCTCGACGG CCTGAAGGCCTTCAA Lcho_0903 968198 - 969061 + | Crp/FNR family transcriptional regulator Lcho_0904 969369 - 969100 - | hypothetical protein Lcho_0905 969854 - 969501 - | hypothetical protein TERM 480 969783 - 969728 - G 77 -16.9 -2.86164 | gap 3, overlap 969723 GCCGGAAGCACGACA TCGCGCCGGCCAGC-CGTTC-GGCCCAG TCG CTGGGCCGGAAAGTGC-GGCCGTCGCGG GTCAGGCCCTGGATG TERM 481 970003 - 970022 + H 93 -6.4 -5.1517 | opp_overlap 970000, overlap 970012 GCCTACAATCGATCG GCGCTC TCCGAAAC GAGCGC TTTTTCGTTTCTTTT TERM 482 970012 - 970033 + H 100 -5.2 -5.56264 | opp_overlap 970000, overlap 970003 CGATCGGCGCTCTCC GAAACGAG CGCTTT TTCGTTTC TTTTTTCTGTTTGCC Lcho_0906 970066 - 971274 + | acetylornithine and succinylornithine aminotransferase Lcho_0907 971271 - 972233 + | ornithine carbamoyltransferase Lcho_0908 972272 - 972931 + | hypothetical protein Lcho_0909 973881 - 972967 - | MltA-interacting MipA family protein Lcho_0910 974055 - 974798 + | metallophosphoesterase Lcho_0911 974810 - 976249 + | serine/threonine protein kinase TERM 483 976264 - 976282 + T 78 -13.1 -3.44051 | opp_overlap 976264 AGCCCGCAAGAAGAA CGGCGCC ACGCG GGCGCCG TTGTCGTCATCGCCC TERM 484 976282 - 976264 - T 89 -13.1 -3.94877 | opp_overlap 976264 AGCCCGCAAGAAGAA CGGCGCC ACGCG GGCGCCG TTGTCGTCATCGCCC Lcho_0912 977664 - 976324 - | argininosuccinate synthase Lcho_0913 977831 - 978145 + | hypothetical protein Lcho_0914 978292 - 978792 + | hypothetical protein TERM 485 980164 - 980150 - g 70 -12.8 -3.34227 | overlap 980143 CGACGAAACCATCAA CCGCCG CTT CGGCGG CACCGGCCTGGGTCT Lcho_0915 978789 - 981257 + | Hpt sensor hybrid histidine kinase Lcho_0916 981668 - 981246 - | hypothetical protein Lcho_0917 983124 - 981754 - | DNA repair protein RadA TERM 486 982674 - 982687 + g 72 -3.7 -4.59773 | CGAGCCCGATCTCGG CCAGC ACGC GCAGG TTTTTCCCGCTCAGG Lcho_0918 983204 - 983833 + | lysine exporter protein LysE/YggA TERM 487 983835 - 983853 + T 76 -13.8 -3.06183 | AGCGCGCCGCCTGAG GCCGCGCG CGC CGTGCGGC TTCAGTCGGCGTCGC Lcho_0919 984265 - 983855 - | class I peptide chain release factor Lcho_0920 985414 - 984281 - | alanine racemase TERM 488 985007 - 985040 + g 73 -13.9 -3.36273 | gap 1, overlap 985009 GGCGCTGCGCAAGGC CTGCGGCGTGAAGCCG AGC CGG-TTCATGCCGCTG TTCATCTTCAGGAAC TERM 489 985009 - 985038 + g 73 -15.1 -3.25073 | gap 1, overlap 985007 CGCTGCGCAAGGCCT GCGGCGTGAAGCCG AGC CGG-TTCATGCCGC TGTTCATCTTCAGGA Lcho_0921 985646 - 986899 + | major facilitator transporter Lcho_0922 986912 - 987841 + | hypothetical protein Lcho_0923 988699 - 987860 - | response regulator receiver protein Lcho_0924 988960 - 990156 + | aspartate transaminase TERM 490 990199 - 990244 + T 71 -12 -3.18264 | gap 3, opp_overlap 990182 CGGCGGGGACGGCCG TTCAGGTGTCGGTGGCCGCCGCC TCC GG-GGCGG-TGCCGGCACC-GAA TTCCTGGCTCACGGC Lcho_0925 991171 - 990200 - | LysR family transcriptional regulator Lcho_0926 991293 - 991526 + | hypothetical protein Lcho_0927 991568 - 991822 + | hypothetical protein Lcho_0928 993309 - 991825 - | aldehyde dehydrogenase Lcho_0929 993879 - 993457 - | large conductance mechanosensitive channel protein Lcho_0930 994108 - 994704 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit Lcho_0931 994723 - 996126 + | cytochrome b/b6 domain-containing protein Lcho_0932 996152 - 996934 + | cytochrome c1 TERM 491 996973 - 997005 + F 100 -19.1 -5.49579 | opp_overlap 996935, overlap 996974 ACGGGTCGGCTGTCA GCGCGCAGGGGTGGC TTG GCCACCGCTGCGCGA TTTTCTTTTTTCTGA TERM 492 996974 - 997004 + F 100 -22.6 -3.87307 | opp_overlap 996935, overlap 996973 CGGGTCGGCTGTCAG CGCGCAGGGGTGGC TTG GCCACCGCTGCGCG ATTTTCTTTTTTCTG Lcho_0933 997048 - 997662 + | glutathione S-transferase domain-containing protein Lcho_0934 997676 - 998233 + | stringent starvation protein B Lcho_0935 998522 - 999187 + | transaldolase Lcho_0937 1000900 - 999590 - | DNA-directed DNA polymerase Lcho_0936 999192 - 999647 + | hypothetical protein Lcho_0938 1001043 - 1002299 + | hypothetical protein TERM 493 1002397 - 1002416 + F 100 -10.7 -5.81412 | GAGCTGGCCTCACAC CCCCACG CTTTGT CGTGGGG TTTTTTTTGCCTGCG Lcho_0939 1002462 - 1003925 + | peptidase U62 modulator of DNA gyrase TERM 494 1004123 - 1004101 - f 74 -11.2 -3.60234 | opp_overlap 1004103, overlap 1004103 CCAGACACCTTCAAA GACCGCCGGA TGC CCCGGCGGTT TTTTTTTGCCTCGTC TERM 495 1004103 - 1004121 + F 100 -13.1 -6.11644 | opp_overlap 1004101 1004103 AGACACCTTCAAAGA CCGCCGG ATGCC CCGGCGG TTTTTTTTTGCCTCG TERM 496 1004121 - 1004103 - f 80 -13.8 -3.37755 | opp_overlap 1004103, overlap 1004101 AGACACCTTCAAAGA CCGCCGGA TGC CCCGGCGG TTTTTTTTTGCCTCG Lcho_0940 1004178 - 1005299 + | phospho-2-dehydro-3-deoxyheptonate aldolase Lcho_0941 1005355 - 1005657 + | hypothetical protein TERM 497 1005665 - 1005687 + T 81 -12.7 -3.65827 | gap 1 GGTTCTGAACCGGAT CGGTGCGCCG TGCG CGGCGC-CCG TTTCGATCAGCCTTG Lcho_0942 1006269 - 1005694 - | ATP--cobalamin adenosyltransferase TERM 498 1005918 - 1005970 + g 75 -14.9 -3.40403 | CGTGCGCCAGTGCCG CGCTGCGGGTGCCG-GCCGGCAGGA TGAAT TCCTGCAGGCGCGGCAGTTGC-GCG TTGTAGTGCGCCAGC TERM 499 1006285 - 1006299 + H 81 -11.4 -4.08216 | GGCGCGATCGTAGCG CCGGCA CAA TGCCGG TTTTGGAGACCCTGA Lcho_0943 1006317 - 1007081 + | yecA family protein Lcho_0944 1007194 - 1007616 + | UspA domain-containing protein Lcho_0945 1007988 - 1007728 - | hypothetical protein TERM 500 1007963 - 1007953 - G 74 -4.6 -4.56597 | CTTGCGGCCGAAAAA GCCG AGC CAGC GTGACCATGAAAAAA Lcho_0946 1009643 - 1008066 - | alkaline phosphatase TERM 501 1008558 - 1008588 + g 71 -6.9 -4.25104 | gap 1, overlap 1008548 CAGTTTCCAGCGCCG CTGGCTGTGTGCGA GCCC TCG-GTGCAGCCAG TTTTCCTGCGCGGGG TERM 502 1009709 - 1009662 - R 74 -4.9 -4.46212 | gap 3 GGCGCGATCATAAAA GCATCGGCTCGAGCCCCCGTGC GCCGCTG GC-CA-GGGC-CGCGCCAATGC GGTCGAGCAGCGATG Lcho_0947 1010589 - 1009654 - | LysR family transcriptional regulator Lcho_0948 1010746 - 1012053 + | D-amino-acid dehydrogenase TERM 503 1012300 - 1012317 + T 100 -12.7 -5.75945 | TTTGAACATCCATCA GCCCACC GCAA GGTGGGC TTTTTTTTGCCAAGT TERM 504 1012660 - 1012634 - T 100 -7.3 -5.10497 | opp_overlap 1012634 AATGCACGGAAAAAA GGCCCAAGG TGTTGATTT CCTTGAGCC TTTTGGACTTCCTCG TERM 505 1012771 - 1012797 + T 77 -13.1 -3.40403 | gap 1 CTGTGGCGAGCCTTC TGCCGGTGTCCC GATT GGGACACCG-CA TTGTGATGCGACGCC Lcho_0949 1013753 - 1012929 - | hypothetical protein Lcho_0950 1014244 - 1014867 + | resolvase domain-containing protein Lcho_0951 1014935 - 1015258 + | hypothetical protein Lcho_0952 1015263 - 1015472 + | hypothetical protein TERM 506 1016090 - 1016102 + G 70 -4.1 -4.45168 | overlap 1016083 CTCTGCGCGAGATAA TCGGT GAT ACTGA TTTCTCTTTTCGAGA Lcho_0953 1015474 - 1016364 + | hypothetical protein TERM 507 1016834 - 1016850 + T 100 -10.1 -4.90266 | opp_overlap 1016834 1016832 GCACAGAAGCAAACA GAGCCCT CAA GGGGCTC TTTTTCGTTCATGGG Lcho_0954 1018313 - 1017147 - | integrase family protein TERM 508 1017973 - 1017960 - G 87 -3.1 -5.08824 | gap 1, opp_overlap 1017961, overlap 1017961 CGCCCACTTAAAAAA CCCAGA AAT TC-GGG TCATGTGGTCATTCA TERM 509 1018142 - 1018113 - G 70 -2.1 -4.57073 | gap 1, overlap 1018114 1018115 CAGTCGCTGGAAAAA GTCTCGA-CAAGCA GGG CGCTTGATCGAGTG GATAGGTATGTCACC TERM 510 1018404 - 1018428 + r 100 -17.2 -4.4009 | GCGGCCTGTCTTTCA GCCCTTCGCG CCCCT CGCGAAGGGC TTTTCTGCCCTCACA Lcho_0955 1019521 - 1018439 - | transposase IS4 family protein TERM 511 1019697 - 1019710 + r 71 -3.7 -4.5123 | overlap 1019692 1019694 GCTGCAGTCTTGGCC GCCGC TGCC GCTGC TTTCTTTGCTGCCTT TERM 512 1020113 - 1020065 - R 100 -17.6 -4.87807 | gap 1 GTAAGACATGAAAAA GCGCCCTGTG-ACCAACTGGATT GGGA AATCCAATTGGGACACCGGGCGC CCTGTGCGGCATCGC Lcho_0956 1021224 - 1020556 - | phosphoglycolate phosphatase Lcho_0957 1021928 - 1021221 - | ubiquinone biosynthesis O-methyltransferase TERM 513 1021974 - 1021959 - R 100 -11.8 -5.78622 | opp_overlap 1021958, overlap 1021947 GCAGGCGAAAAAAAA CCCCGC CGAA GCGGGG CTCTGGTACGAGCAG Lcho_0958 1022741 - 1022010 - | OmpA/MotB domain-containing protein TERM 514 1023300 - 1023318 + G 85 -8.8 -4.65895 | opp_overlap 1023265 1023300 1023297 CGGTCTACGACACCA TCGTGCGC ATG GCGCAGGA TTTTTCGCTGCGGCA Lcho_0959 1023035 - 1025692 + | DNA gyrase, A subunit Lcho_0960 1025692 - 1026270 + | hypothetical protein TERM 515 1026689 - 1026728 + G 74 -9.8 -4.1552 | gap 1, overlap 1026690 1026692 CCCGGGTGGCCTATC TCG-GCCCGGCCGGCACGT TCA GCGAGCAGGCCGCGCTCGG TTTCTTCGGCAGCTC Lcho_0961 1026373 - 1027497 + | chorismate mutase TERM 516 1027671 - 1027703 + G 72 -13.3 -3.57144 | opp_overlap 1027631, overlap 1027672 1027699 AGCGCATGGGCGTGG TCGACATCGGCGCCG AAT CGGCGCTGCTGGCGG TTTCGGGCTCCGACA Lcho_0962 1027526 - 1028407 + | prephenate dehydrogenase TERM 517 1029248 - 1029275 + G 79 -12.8 -3.73775 | gap 1, overlap 1029249 CCGGCGAGGTGCACG T-CGAGGCCGATG CCT CGTCGGCCTCGTA TTTCATCGCGCTCGG TERM 518 1029249 - 1029273 + G 87 -17.9 -3.45324 | overlap 1029248 CGGCGAGGTGCACGT CGAGGCCGATG CCT CGTCGGCCTCG TATTTCATCGCGCTC TERM 519 1030414 - 1030426 + G 71 -6.2 -4.25283 | opp_overlap 1030414 1030422 GCGCCACTCAAGCCA GCGC AAGAC GCGC TTTTGCTCGACAACT Lcho_0963 1028428 - 1030527 + | 3-phosphoshikimate 1-carboxyvinyltransferase Lcho_0964 1030689 - 1032377 + | ribosomal protein S1 TERM 520 1032673 - 1032621 - g 100 -20.5 -4.09685 | GGTGATCCCCGAAAA GCTGGTCCCCCACTTCAAGCCGGGC AAG GCCCTGCGCGAAGCGGTCGACCAGC GTCAGGACGACGCGC Lcho_0965 1032397 - 1032735 + | integration host factor, beta subunit TERM 521 1032763 - 1032808 + F 84 -11.8 -3.96148 | gap 1, overlap 1032767 CCCGCCCCTGTCGAG TGT-TCCGGCCCGCCGGCTCA TGGAT TGAGCTGTCGGGCCGGTTGCG TTTGTGCTCCAGGCG TERM 522 1032767 - 1032803 + F 100 -21.6 -3.34455 | overlap 1032763 CCCCTGTCGAGTGTT CCGGCCCGCCGGCTCA TGGAT TGAGCTGTCGGGCCGG TTGCGTTTGTGCTCC Lcho_0966 1032881 - 1033201 + | hypothetical protein TERM 523 1034130 - 1034120 - g 72 -5.4 -4.42238 | opp_overlap 1034125, overlap 1034121 1034123 1034125 GCACCTCAAGGAAAA TCAG AGC CTGA GCGCCGCACTCAAGC Lcho_0967 1033191 - 1034345 + | hypothetical protein Lcho_0968 1035308 - 1034379 - | lipopolysaccharide heptosyltransferase I TERM 524 1035217 - 1035170 - G 71 -14.8 -3.05463 | gap 1 ACTTGCGCCAGGCAA TCGGCAGCACCCGCCGCACGGCA GGA TGCAGCGCGGCGATCGCCG-CGA ACGGCGCCTCCACCA Lcho_0969 1036008 - 1035355 - | hypothetical protein Lcho_0970 1037112 - 1036060 - | hypothetical protein Lcho_0971 1038101 - 1037109 - | methyltransferase type 11 Lcho_0972 1038303 - 1038974 + | hypothetical protein Lcho_0973 1039011 - 1039853 + | hypothetical protein Lcho_0974 1040722 - 1039907 - | hypothetical protein TERM 525 1040636 - 1040611 - G 71 -8.3 -4.09685 | gap 1, overlap 1040627 1040628 CGGGACTGGTGAAAA GCAGG-GCGC GGGCAAA GCGCACCTGC GACATGCAGTGCTGC Lcho_0975 1041801 - 1040731 - | glycosyl transferase group 1 TERM 526 1040823 - 1040794 - G 73 -13.5 -3.40403 | GCGCTGCCACGAGAA GCCGCGGGCATGG GCGG CGATGGCCGCGGC GCGTCCGGGTTGCCG TERM 527 1040955 - 1040902 - G 70 -12.4 -3.35522 | gap 1, overlap 1040900 1040953 GAAGCGGTCGAAATA GTGCGCCACGTCGCCGCCCACCTCG GGCAG CGAGGTCAGCCGCGACA-GGAACAC CGGCTTGCCGAAGTG TERM 528 1041157 - 1041208 + g 72 -12.3 -3.71848 | overlap 1041159 GGTCGCGCCGGCCAG CA-CGATGCGCTGTTCGGGCCAGGC GGCG GCCAGGTC-GAGCAGCGCGGCGATG TTCTTGGTCGGCGCC Lcho_0976 1042756 - 1041809 - | glycosyl transferase family protein TERM 529 1043240 - 1043262 + G 74 -9.8 -4.07568 | overlap 1043241 GCCGCGTCAAGGGTG TCGGGCCG GGCAATG CGGCCCGG TTTTCGGAAGCCGGC Lcho_0977 1043041 - 1043370 + | hypothetical protein Lcho_0978 1044675 - 1043407 - | patatin TERM 530 1044724 - 1044738 + r 72 -7 -4.21194 | overlap 1044725 CATGGCCTTGGATCG GCGCCG AAG CGGCGG TTTTCAGTCGTGGCC TERM 531 1044749 - 1044778 + r 78 -13.5 -3.51825 | GGCGGTTTTCAGTCG TGGCCGCGTCCGT GGCC GTGGCCGCGGCCA TTGTCATTGCCGTGA TERM 532 1045358 - 1045387 + r 74 -2.7 -4.81249 | gap 1 CGTGTATCTGCCCTT GACGCCAGGCCTCG GGC CGCTGCAT-GCGTC TTTTTGCATTTCGGG Lcho_0980 1048971 - 1045405 - | DNA polymerase III, alpha subunit TERM 533 1046334 - 1046324 - G 83 -5.4 -4.83169 | opp_overlap 1046333, overlap 1046325 1046332 ACCCGGGCACAAAAA TCGA AGA TCGA GCGGAACGGCCCGCC TERM 534 1047989 - 1048008 + g 79 -5.6 -4.70879 | gap 1, opp_overlap 1047988, overlap 1047988 AGCCGCTCCAGATAG CGCGCCCGC TCG GCGT-CGCG TTTTTCCGGTTTCGG Lcho_0981 1049032 - 1049775 + | rhodanese domain-containing protein Lcho_0982 1049907 - 1050809 + | LysR family transcriptional regulator Lcho_0983 1051773 - 1050811 - | GTPase EngC Lcho_0984 1053064 - 1051781 - | Ste24 endopeptidase Lcho_0985 1053136 - 1053699 + | exonuclease RNase T and DNA polymerase III Lcho_0986 1054183 - 1053716 - | MarR family transcriptional regulator Lcho_0987 1055982 - 1054189 - | acyl-CoA dehydrogenase domain-containing protein TERM 535 1056072 - 1056090 + r 93 -3 -5.24129 | opp_overlap 1056071, overlap 1056071 1056070 GGAACGTGATGGAAC GCGGCG CTCAGGC CGCGGC TTTTTTCTGCGCGCC Lcho_0988 1056822 - 1056079 - | ABC transporter-related protein Lcho_0989 1058603 - 1056822 - | ABC transporter-related protein Lcho_0990 1059642 - 1058605 - | inner-membrane translocator Lcho_0991 1060789 - 1059647 - | extracellular ligand-binding receptor TERM 536 1060850 - 1060867 + r 70 -5.5 -4.25681 | GGCTATTGGTGTATT TCCGACC GATC GGTCGAA TTTGTTGCGTTGGCT Lcho_0992 1061694 - 1060930 - | short-chain dehydrogenase/reductase SDR Lcho_0993 1063586 - 1061706 - | AMP-dependent synthetase and ligase Lcho_0994 1064404 - 1063583 - | enoyl-CoA hydratase/isomerase TERM 537 1063645 - 1063622 - G 70 -13.8 -3.14132 | opp_overlap 1063636 1063641 GCGTTTTTCGAGGAA GGCGCGCAGG CGGT CCTGCGCGTC GGGGGTGCTTTCGGC TERM 538 1065465 - 1065410 - g 82 -9.7 -4.41494 | gap 3, overlap 1065452 GATCCTCAAGGAAAA CGCCAAGCGGCTGCTGCG-GCTGGCCTG AGC CAGGCCTGAACAC-GCAGC-GCTCCGCG CTGGAGCAGGGTTGA Lcho_0995 1064574 - 1065437 + | amidohydrolase 2 Lcho_0996 1065631 - 1065942 + | cytochrome c class I TERM 539 1065962 - 1065993 + T 72 -11.7 -3.54919 | opp_overlap 1065969, overlap 1065969 CTTTCACGCGCCCAT GAAAAAACGCGGC CTCGAA GCCGCGTTTTTTG TTTCCCAAGCTCGTT TERM 540 1065969 - 1065986 + T 100 -9.8 -5.63517 | opp_overlap 1065969, overlap 1065962 GCGCCCATGAAAAAA CGCGGC CTCGAA GCCGCG TTTTTTGTTTCCCAA TERM 541 1065986 - 1065969 - T 100 -10.5 -5.14563 | opp_overlap 1065969 1065962 GCGCCCATGAAAAAA CGCGGCC TCGA AGCCGCG TTTTTTGTTTCCCAA Lcho_0997 1066877 - 1066104 - | oxidoreductase FAD/NAD(P)-binding subunit Lcho_0998 1067708 - 1067076 - | chemotaxis phosphatase, CheZ Lcho_0999 1068126 - 1067728 - | response regulator receiver protein Lcho_1000 1069166 - 1068204 - | OmpA/MotB domain-containing protein Lcho_1001 1070037 - 1069180 - | chemotaxis signal transduction protein CheY Lcho_1002 1070887 - 1070114 - | methyltransferase type 12 TERM 542 1070529 - 1070564 + g 70 -13.2 -3.30124 | gap 1, overlap 1070530 CTGGCCTCGTCGACG GGCAGCGGGGCGGCCTG CGC CAGGCCGCTCAGC-GCG TTCTGGGGGGTCGGG TERM 543 1070530 - 1070563 + g 75 -16.7 -2.57931 | gap 1, overlap 1070529 TGGCCTCGTCGACGG GCAGCGGGGCGGCCTG CGC CAGGCCGCTCAGC-GC GTTCTGGGGGGTCGG Lcho_1003 1072321 - 1071050 - | putative metal dependent phosphohydrolase TERM 544 1072414 - 1072397 - R 100 -12.7 -5.07652 | GCCGGCAAAAGAAAA CGGGCCT GTGA AGGCCCG TTGAAAGGCATCGCG Lcho_1004 1073023 - 1072487 - | flagellar transcriptional activator FlhC Lcho_1005 1073408 - 1073085 - | flagellar transcriptional activator Lcho_1006 1074951 - 1073626 - | tetratricopeptide TPR_4 Lcho_1007 1076601 - 1075099 - | hypothetical protein Lcho_1008 1078656 - 1076638 - | TPR repeat-containing protein TERM 545 1078417 - 1078450 + g 84 -10.9 -4.18018 | gap 1, overlap 1078431 GGTGGCCCGGCGTGC GGCG-TCGGTGCAGGC CTG GCGGGCGCCGAGCGCC TTTTCGCTGCGCGCC TERM 546 1078922 - 1078902 - H 70 -5.3 -4.42386 | overlap 1078903 1078905 GGCTGATGCAGAAAA CGACCTCCG GGT CAGAGGCTG CACCCAGGCTGACGA Lcho_1009 1079038 - 1079898 + | flagellin domain-containing protein Lcho_1010 1080213 - 1081076 + | flagellin domain-containing protein TERM 547 1081151 - 1081180 + F 100 -7.7 -5.32699 | opp_overlap 1081151 TGCGTCGATACATCA GTCGTCCGCTGTC GAAA GGCTCCGGGCGAC TTTTTTCATCTTTAC Lcho_1011 1081216 - 1082655 + | flagellar hook-associated 2 domain-containing protein Lcho_1012 1082799 - 1083218 + | flagellar protein FliS Lcho_1013 1083276 - 1083620 + | flagellar chaperone Lcho_1014 1083668 - 1084423 + | type IV pilus assembly PilZ Lcho_1015 1084828 - 1084460 - | flagellar hook-basal body complex subunit FliE TERM 548 1084701 - 1084743 + g 85 -17 -3.53091 | gap 2 TCGACGCCGCCGCTG GCGGCCGGGCCCGCCGCGCC GCTCA GGC-CGGCGG-CCTGGGCGC TTTCGCGCACCCGCT TERM 549 1085965 - 1085934 - g 72 -15.8 -2.75481 | gap 1, overlap 1085919 GTTCAAGCCCAACCA GGGCGACGCGC-CGG CCG CCGTGCGCAGCGCCC AGTCGACCGAGCAGA TERM 550 1086010 - 1085985 - g 70 -12.5 -3.29947 | gap 1 GACCGAGCAGAGCAA CCCCGGCGCGGC CAT GCC-CGCCGGCG TGCCGGGCGCGCAGA Lcho_1016 1085026 - 1086756 + | flagellar M-ring protein FliF Lcho_1017 1086778 - 1087779 + | flagellar motor switch protein FliG Lcho_1018 1087763 - 1088548 + | flagellar assembly protein FliH Lcho_1019 1088545 - 1089945 + | flagellar protein export ATPase FliI Lcho_1020 1089984 - 1090463 + | flagellar export protein FliJ TERM 551 1090953 - 1090906 - g 72 -13.2 -3.53012 | overlap 1090892 CCCGTGCCCGGGAAA CGGCGCCGGAGGAATCCGCACC CGCT GAAGCGGCCCCCTCCGGTGGCG CCACGGTGTCGCACT Lcho_1021 1090482 - 1091954 + | flagellar hook-length control protein Lcho_1022 1092131 - 1092733 + | flagellar basal body-associated protein FliL Lcho_1023 1092759 - 1093763 + | flagellar motor switch protein FliM Lcho_1024 1093753 - 1094214 + | flagellar motor switch protein FliN Lcho_1025 1094224 - 1094646 + | flagellar biosynthesis protein FliO Lcho_1026 1094649 - 1095437 + | flagellar biosynthetic protein FliP Lcho_1027 1095472 - 1095741 + | flagellar biosynthetic protein FliQ Lcho_1028 1095754 - 1096515 + | flagellar biosynthetic protein FliR Lcho_1029 1096540 - 1097103 + | putative transmembrane protein Lcho_1030 1097145 - 1097600 + | PTS system fructose subfamily IIA component Lcho_1031 1097569 - 1097838 + | phosphotransferase system, phosphocarrier protein HPr TERM 552 1097850 - 1097882 + T 81 -13.4 -3.57263 | gap 1 ATAGGTCTTCGCACC CCGCACGGCCGCGGC GTGA GCCCCGGCC-TGTGG TTTCCGGATCAGGCT Lcho_1032 1098751 - 1097891 - | hypothetical protein Lcho_1033 1098901 - 1100712 + | phosphoenolpyruvate-protein phosphotransferase TERM 553 1102445 - 1102431 - f 75 -7 -4.42788 | GCCAATCCCAGAAAA CCGGTC GTA GTCCGG ATCGCAGTCTGCAAC TERM 554 1102957 - 1102975 + F 71 -3.8 -4.55798 | ATGCAAACCAAAGTC TCGCGATT GTC GGTCGTGA TTTTGGTTTGCCATC TERM 555 1103740 - 1103729 - f 72 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAATAGATCCT TERM 556 1106440 - 1106403 - f 100 -19.9 -3.14564 | opp_overlap 1106403 1106404, overlap 1106408 TCAGGCTTCTATTAA TCCAAGCCCCCTTCCTC TCGC GAGGTAGGGGGCTTGGT ATTTTGGGCGGCAGA TERM 557 1106403 - 1106441 + F 100 -18.3 -4.07568 | gap 1, opp_overlap 1106403 1106408, overlap 1106404 TCAGGCTTCTATTAA T-CCAAGCCCCCTTCCTC TCGC GAGGTAGGGGGCTTGGTA TTTTGGGCGGCAGAA TERM 558 1106404 - 1106439 + F 100 -23.4 -3.63744 | opp_overlap 1106403 1106408, overlap 1106403 CAGGCTTCTATTAAT CCAAGCCCCCTTCCTC TCGC GAGGTAGGGGGCTTGG TATTTTGGGCGGCAG TERM 559 1106435 - 1106408 - f 89 -17 -3.20723 | opp_overlap 1106404 1106403, overlap 1106403 CTTCTATTAATCCAA GCCCCCTTCCTC TCGC GAGGTAGGGGGC TTGGTATTTTGGGCG Lcho_1034 1106795 - 1106956 + | hypothetical protein Lcho_1035 1107014 - 1107505 + | transposase IS3/IS911 family protein Lcho_1036 1107502 - 1107720 + | hypothetical protein Lcho_1038 1108537 - 1110003 + | integrase catalytic region Lcho_1039 1110000 - 1110824 + | IstB ATP binding domain-containing protein TERM 560 1111394 - 1111377 - T 100 -12.7 -4.63479 | opp_overlap 1111371 CACTAGAAACGAAAA CGCCACC CGAG GGTGGCG TAAATCGTTGATTTC Lcho_1041 1112312 - 1111587 - | DNA polymerase III, epsilon subunit Lcho_1042 1112664 - 1112326 - | ferredoxin, 2Fe-2S type, ISC system Lcho_1043 1114545 - 1112680 - | Fe-S protein assembly chaperone HscA Lcho_1044 1115085 - 1114567 - | co-chaperone Hsc20 TERM 561 1115138 - 1115121 - R 100 -9.8 -5.4833 | opp_overlap 1115132 GCAGCCAAGAAAAAA GCGCGG ACTGAG CCGCGC CTGGCTGGTGTCGGA Lcho_1045 1115494 - 1115162 - | iron-sulfur cluster assembly protein IscA Lcho_1046 1115909 - 1115523 - | FeS cluster assembly scaffold IscU Lcho_1047 1117169 - 1115934 - | cysteine desulfurase IscS Lcho_1048 1117759 - 1117226 - | BadM/Rrf2 family transcriptional regulator Lcho_1049 1118392 - 1117895 - | protein tyrosine phosphatase Lcho_1050 1120500 - 1118389 - | excinuclease ABC, B subunit Lcho_1051 1120591 - 1121787 + | aspartate transaminase TERM 562 1121832 - 1121861 + T 100 -19.3 -3.93583 | opp_overlap 1121838 GCGGGTCTCAGTGCT CGACAACGGCGCC TGCG GGCGCCGTTGCCG TTTGTCCGTGGCTTG TERM 563 1121855 - 1121838 - T 78 -14.1 -3.29511 | opp_overlap 1121832 CTCAGTGCTCGACAA CGGCGCC TGCG GGCGCCG TTGCCGTTTGTCCGT Lcho_1052 1122866 - 1121883 - | quinone oxidoreductase Lcho_1053 1123259 - 1122984 - | hypothetical protein Lcho_1054 1125077 - 1123329 - | putative signal transduction protein Lcho_1055 1126222 - 1125185 - | dihydroorotate oxidase Lcho_1056 1126259 - 1126921 + | ribose 5-phosphate isomerase Lcho_1057 1128352 - 1126961 - | hypothetical protein Lcho_1058 1128657 - 1128343 - | hypothetical protein TERM 564 1128376 - 1128396 + g 82 -13.9 -3.74872 | overlap 1128378 TCCGCCGCCGAAGCT GCGGCCGCC GGT GGCGGCCTC TTTGCTGAAGTAGGT TERM 565 1128378 - 1128394 + g 77 -15.1 -3.4582 | overlap 1128376 CGCCGCCGAAGCTGC GGCCGCC GGT GGCGGCC TCTTTGCTGAAGTAG TERM 566 1128715 - 1128768 + r 84 -16.7 -2.88249 | gap 1, opp_overlap 1128711 CAGCATAGAGACCCG ACCTGAAGCCTG-GCTGTAGCGCAGC GTC GCGGCGCTGCAGCTCAGGTGTCGGGG TGTATCAGGCGTCTC Lcho_1059 1129579 - 1128773 - | hypothetical protein Lcho_1060 1130573 - 1129587 - | homoserine kinase Lcho_1061 1130916 - 1130581 - | hypothetical protein Lcho_1062 1130970 - 1133774 + | DNA polymerase I Lcho_1063 1133771 - 1134871 + | diguanylate cyclase TERM 567 1134980 - 1135020 + G 77 -11.1 -4.07124 | gap 1, opp_overlap 1135009, overlap 1134993 TGCTCGCCGAGCGGC CGGTG-GCCGTGCTCGGC ACGCTC GACGAACACGGCGCGCCG TTTGTCTCGATGGTG Lcho_1064 1134913 - 1135428 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding Lcho_1065 1135527 - 1136534 + | oxidoreductase domain-containing protein Lcho_1066 1138102 - 1136567 - | methyltransferase type 11 TERM 568 1138212 - 1138191 - R 91 -14.5 -3.85165 | GACCGGAAAGCGAAA GGGCAATCC ATCC GGATTGCCC CTGCACATGCTCACG TERM 569 1138234 - 1138263 + r 93 -15.7 -3.92324 | overlap 1138235 1138237 ATGCTCACGGCGCCG GGATGTCGGCCGG GCGC CCGGCCGACGTCA TTTCATCTTGCGGCG TERM 570 1138235 - 1138262 + r 93 -19.2 -2.95073 | overlap 1138234 1138237 TGCTCACGGCGCCGG GATGTCGGCCGG GCGC CCGGCCGACGTC ATTTCATCTTGCGGC TERM 571 1138237 - 1138260 + r 81 -16 -3.02568 | overlap 1138235 1138234 CTCACGGCGCCGGGA TGTCGGCCGG GCGC CCGGCCGACG TCATTTCATCTTGCG Lcho_1067 1138869 - 1138261 - | hypothetical protein Lcho_1068 1139811 - 1139044 - | cobyrinic acid ac-diamide synthase Lcho_1069 1141179 - 1139914 - | major facilitator transporter Lcho_1070 1141958 - 1141206 - | urease accessory protein UreF Lcho_1071 1142662 - 1141958 - | UreE urease accessory domain-containing protein TERM 572 1142549 - 1142559 + g 70 -4.6 -4.38154 | CTGGCTGTCGGTGGC GTCG AAA CGGC TTTTCTGGCGGGTGT Lcho_1072 1143304 - 1142783 - | hypothetical protein Lcho_1073 1144245 - 1143304 - | hypothetical protein Lcho_1074 1144873 - 1144259 - | LemA family protein Lcho_1075 1145034 - 1145513 + | rhodanese domain-containing protein Lcho_1076 1147225 - 1145498 - | urease, alpha subunit Lcho_1077 1147618 - 1147313 - | urease, beta subunit Lcho_1078 1147797 - 1147618 - | hypothetical protein Lcho_1079 1148153 - 1147851 - | urease, gamma subunit Lcho_1080 1149356 - 1148253 - | putative signal peptide protein Lcho_1081 1150930 - 1149365 - | hypothetical protein TERM 573 1149842 - 1149863 + g 70 -2.1 -4.56597 | gap 1 CTCCTCGACCTCCAG CGCCACCGCG ATG CGC-GAGCCG TTTTTCGGCAGCGCC Lcho_1082 1151306 - 1154968 + | histidine kinase Lcho_1083 1154961 - 1155911 + | two component LuxR family transcriptional regulator Lcho_1084 1156020 - 1157297 + | urea ABC transporter, urea binding protein Lcho_1085 1157448 - 1159034 + | urea ABC transporter, permease protein UrtB TERM 574 1159690 - 1159714 + G 76 -12.1 -3.75024 | CATGACGCTGTTCAT GCTGACCGGCG TGG TGCTGGTCGGC TTCTTCCTGATGGCG Lcho_1086 1159031 - 1160149 + | urea ABC transporter, permease protein UrtC Lcho_1087 1160146 - 1161036 + | urea ABC transporter, ATP-binding protein UrtD Lcho_1088 1161046 - 1161738 + | urea ABC transporter, ATP-binding protein UrtE Lcho_1089 1161778 - 1163154 + | hypothetical protein TERM 575 1163164 - 1163181 + T 74 -12.7 -3.25823 | opp_overlap 1163164 AGCTGAAATGAAAAA CGCCTCC CGAA GGAGGCG TTGCTGTCAGAGCGA TERM 576 1163181 - 1163164 - T 100 -12.7 -4.99134 | opp_overlap 1163164 AGCTGAAATGAAAAA CGCCTCC CGAA GGAGGCG TTGCTGTCAGAGCGA Lcho_1090 1163885 - 1163214 - | hypothetical protein Lcho_1091 1164882 - 1164193 - | hypothetical protein Lcho_1092 1165927 - 1165091 - | urease accessory protein UreD TERM 577 1166515 - 1166497 - R 100 -11.7 -5.79526 | opp_overlap 1166497 ACAGGCGAAAAAAAA CCGTCGC ACAAG GCGACGG TTTCACGTGAGATGC TERM 578 1166497 - 1166515 + r 74 -11.7 -3.60627 | opp_overlap 1166497 ACAGGCGAAAAAAAA CCGTCGC ACAAG GCGACGG TTTCACGTGAGATGC Lcho_1093 1166773 - 1166555 - | cold-shock DNA-binding domain-containing protein Lcho_1094 1167515 - 1167015 - | CMP/dCMP deaminase zinc-binding Lcho_1095 1168319 - 1167552 - | binding-protein-dependent transport systems inner membrane component Lcho_1096 1169134 - 1168316 - | ABC transporter-related protein Lcho_1097 1170230 - 1169142 - | NMT1/THI5-like domain-containing protein TERM 579 1170414 - 1170382 - R 100 -21.3 -3.34962 | opp_overlap 1170405 GCGCAGACGCGACAA GGCCCCGACCCGC CATCGAC GCGGGCCGGGGCC AGTGCCTCGGCATGG Lcho_1098 1171667 - 1170432 - | peptidase dimerisation domain-containing protein Lcho_1099 1173442 - 1171664 - | amidase Lcho_1100 1174573 - 1173563 - | urate catabolism protein Lcho_1101 1175349 - 1174570 - | GntR family transcriptional regulator TERM 580 1174641 - 1174613 - G 76 -11.6 -3.85698 | TTGGCGTTGGACAAA GGCGCCGCGCCG GCAGG CAGCAGGGCGCC GGCCAGATCGGGCAC TERM 581 1175624 - 1175674 + G 74 -7.6 -4.25104 | gap 2, overlap 1175625 GCTACCGGCTGGTGT TCGGTGTCGGC-GC-CTACTTCAC CGCCC GTGGCGTGGCGTTGCCGACGCCGG TTTTCCTCGACGAGG Lcho_1102 1175428 - 1175784 + | hydroxyisourate hydrolase Lcho_1103 1175845 - 1177047 + | hypothetical protein TERM 582 1177058 - 1177072 + F 81 -12.8 -3.67296 | opp_overlap 1177041 CCTGAGGCGCATCAT GGCGCC TCC GGCGCC TTTCCCTCGCTCCTG Lcho_1104 1177088 - 1178767 + | Na/Pi-cotransporter II-related protein Lcho_1105 1180412 - 1178799 - | methyl-accepting chemotaxis sensory transducer Lcho_1106 1182770 - 1180578 - | diguanylate cyclase/phosphodiesterase Lcho_1107 1182931 - 1184439 + | AraC family transcriptional regulator Lcho_1108 1184448 - 1184963 + | methylated-DNA--protein-cysteine methyltransferase TERM 583 1185709 - 1185730 + G 70 -10.1 -3.85698 | CCTGGTGCCGGTGTT CGGCACGCT CTGG GGCGTGCTG TTTCTGGGCGAGGCA Lcho_1109 1184960 - 1185847 + | hypothetical protein TERM 584 1186004 - 1185979 - T 95 -16.9 -4.07678 | overlap 1186000 CCCGAAAACAGGAAA GGCGGTGCTGC TCGC GCAACACCGCC CGTTCCGGGTCAGGC Lcho_1110 1186797 - 1186030 - | ifapsoriasin-like protein TERM 585 1186939 - 1186893 - R 86 -14.5 -3.53012 | gap 1, overlap 1186897 GCTTTTTCCCGCAAA TGAACAGGCCCTGA-ACGCCGA GGGT TCGGCGTGTCAGGGCCTGGGGA GGGCAGGGGATCGGT TERM 586 1186935 - 1186897 - R 100 -24.1 -3.51232 | gap 1, overlap 1186893 TTTCCCGCAAATGAA CAGGCCCTGA-ACGCCGA GGGT TCGGCGTGTCAGGGCCTG GGGAGGGCAGGGGAT Lcho_1111 1187960 - 1186986 - | gluconolactonase Lcho_1112 1189247 - 1187964 - | TRAP dicarboxylate transporter, DctM subunit TERM 587 1189206 - 1189185 - G 71 -6.5 -4.18494 | CAGGCCGAGCGAAAA GGCGATCGG CACG CCGATCATC ATCAGCAGCACGAAG Lcho_1113 1189798 - 1189247 - | tripartite ATP-independent periplasmic transporter DctQ TERM 588 1189857 - 1189832 - R 100 -17.5 -5.00616 | opp_overlap 1189852 GGCGGTTCGAAAAAA GCCCGCCCGGC CGGG GCCGTGCGGGC TTGGACGCAGCGAGG Lcho_1114 1190867 - 1189881 - | TRAP dicarboxylate transporter, DctP subunit Lcho_1115 1191763 - 1190945 - | NAD-dependent epimerase/dehydratase Lcho_1116 1191915 - 1192649 + | GntR domain-containing protein Lcho_1117 1192774 - 1193685 + | 5-dehydro-4-deoxyglucarate dehydratase TERM 589 1194921 - 1194875 - g 74 -2.3 -4.67011 | gap 3, overlap 1194876 AACCTGACGCAAAAA CCGCTGCA-GATCGTCGACGGC GAAGTG GCCGT-GCCGACCGTGCCG-GG CCTGGGCGTCGAGCT Lcho_1118 1193738 - 1195072 + | glucarate dehydratase Lcho_1119 1195111 - 1196550 + | aldehyde dehydrogenase Lcho_1120 1196582 - 1197535 + | hypothetical protein Lcho_1121 1197549 - 1198493 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Lcho_1122 1198519 - 1199316 + | HpcH/HpaI aldolase Lcho_1123 1199345 - 1200244 + | 2-hydroxy-3-oxopropionate reductase TERM 590 1200296 - 1200313 + F 73 -9.8 -3.87869 | opp_overlap 1200296, overlap 1200310 GTCCGGGCGGCAAGA CGGGCC ACCTTC GGCCCG TTTATCGCGCCTTCG TERM 591 1201152 - 1201094 - g 85 -14.5 -3.79906 | overlap 1201078 CCAGCGCCAGAAGAA GCTCGGCGAACAGCTGGTCGAGCGCCA GATCG TGACCCCCGAACAGCTGCTGACCGCGC TCGACAAGCAGGCCC TERM 592 1201251 - 1201226 - g 91 -19.1 -3.36327 | overlap 1201239 CTATCTGACCGACAA GCAGCTGCAGG AAGC CCTGCAGCTGC AGCGCACCGACCGGG TERM 593 1201808 - 1201840 + G 87 -15.6 -3.5882 | gap 1, opp_overlap 1201806 1201807, overlap 1201836 GCGGCCCAACGAAGG CCCGATGTCGGTCGC CGAC GCGGCCGACG-CGGG TTTCCCGCTGATCTC Lcho_1124 1200420 - 1203473 + | general secretion pathway protein E Lcho_1125 1205429 - 1203474 - | DNA mismatch repair protein MutL TERM 594 1204874 - 1204845 - G 87 -15.7 -3.63627 | gap 1, opp_overlap 1204857 GTGCCAGACCGCAAA CGCCAC-CGCAGGC CGC GCCAGCGCGTGGCG GCGCACCGCTTCGAG TERM 595 1205234 - 1205292 + g 83 -16.8 -3.29144 | gap 4, overlap 1205232 1205233 CCTCGACCAGGATCG CGCGCACGCCGCCGGC--G-GCCAG-TCGC AGC GTGATCTGGCGCGCGCCGGCGTCGAGCGCG TTGTCGAGCAGCTCG Lcho_1126 1206600 - 1205482 - | extracellular ligand-binding receptor Lcho_1127 1206764 - 1207423 + | SNARE associated Golgi protein Lcho_1128 1208965 - 1207448 - | hypothetical protein TERM 596 1208393 - 1208344 - G 78 -18.6 -2.62184 | opp_overlap 1208341 CCGCCTGGTAGACCA CGCGCAGGTCGA-GCCAGCCGTCG TAGG CG-CGGCCGGCGCCGACCAGCACG CCGTTGCTCAGCAGC Lcho_1129 1210562 - 1208991 - | N-acetylmuramoyl-L-alanine amidase Lcho_1130 1211073 - 1210591 - | hypothetical protein Lcho_1131 1211077 - 1212162 + | iron-sulfur cluster binding protein Lcho_1132 1213479 - 1212172 - | hydroxypyruvate reductase Lcho_1133 1214456 - 1213551 - | 2-hydroxy-3-oxopropionate reductase Lcho_1134 1215267 - 1214488 - | hydroxypyruvate isomerase Lcho_1135 1217072 - 1215282 - | glyoxylate carboligase Lcho_1136 1218064 - 1217198 - | hypothetical protein Lcho_1137 1218639 - 1218061 - | hypothetical protein Lcho_1138 1219892 - 1218654 - | oxidoreductase FAD/NAD(P)-binding subunit TERM 597 1219622 - 1219608 - G 75 -5.6 -4.53303 | CACCTGCAGAGAAAA GGTCAG GAA CTGGCC GGGCTTGAACGGTGC Lcho_1139 1219995 - 1219897 - | hypothetical protein Lcho_1140 1221452 - 1220088 - | hydroxydechloroatrazine ethylaminohydrolase TERM 598 1220888 - 1220832 - G 74 -7.8 -4.18018 | gap 2, overlap 1220833 GCGGCTGACCGAAAA CGGCGAG-CACGGCGC-CACCACGATGC GCT GCATCGCGTGGCGCGCCGGGTCGTGCCA GCGCTCGATCAGGCG TERM 599 1221520 - 1221491 - R 100 -16.4 -5.8901 | opp_overlap 1221488 ACAGAAAACAAAAAA GGGCCGGACTGC TTGGGT GCAGGCCGGCCC AACTGACTTGAAATT Lcho_1141 1223016 - 1221544 - | xanthine permease Lcho_1142 1224360 - 1223140 - | hypothetical protein TERM 600 1224200 - 1224250 + g 79 -16.1 -3.28712 | gap 2, overlap 1224202 ACCGCCCACAGCTCG CCGCC-GACGCC-CTTGGCGCGCAG GTC CGGCGCGCTGGGCGGCGTCAGGCTG TTGTCGAGAAAGACG TERM 601 1224202 - 1224248 + g 80 -17.3 -3.21276 | gap 2, overlap 1224200 CGCCCACAGCTCGCC GCC-GACGCC-CTTGGCGCGCAG GTC CGGCGCGCTGGGCGGCGTCAGGC TGTTGTCGAGAAAGA TERM 602 1224497 - 1224441 - R 88 -17.2 -3.09516 | gap 2, overlap 1224443 1224454 TCTGTGAGGAGTCAA CATCGCG-A-CCACACGGGCGCCGGCCG GAT CGGCCGATGCCCGCGGGGCTCCGCGGCG ACGTGACCAAAGTGT TERM 603 1224495 - 1224443 - R 82 -16.2 -3.10796 | gap 2, overlap 1224441 1224454 TGTGAGGAGTCAACA TCGCG-A-CCACACGGGCGCCGGCCG GAT CGGCCGATGCCCGCGGGGCTCCGCGG CGACGTGACCAAAGT TERM 604 1224482 - 1224454 - R 93 -19.5 -2.79679 | overlap 1224443 1224441 AACATCGCGACCACA CGGGCGCCGGCCG GAT CGGCCGATGCCCG CGGGGCTCCGCGGCG Lcho_1143 1225531 - 1224614 - | auxin efflux carrier TERM 605 1225321 - 1225305 - G 70 -10.1 -3.78775 | GTCGCCAGCACGAAA CCGGTGG CCA CCACCAG CATGCCGCCGGCGCC Lcho_1144 1226404 - 1225598 - | 4'-phosphopantetheinyl transferase Lcho_1145 1226576 - 1227553 + | hypothetical protein Lcho_1146 1227628 - 1228488 + | tyrosine recombinase XerD Lcho_1147 1229244 - 1228492 - | polar amino acid ABC transporter, inner membrane subunit Lcho_1148 1230162 - 1229311 - | extracellular solute-binding protein TERM 606 1230056 - 1230072 + g 73 -9.3 -3.89957 | overlap 1230053 GCGGCTGCGGCCGAG GCAGCCG GCG CGGCGGC TTCTTCCTTCTTGCC Lcho_1149 1231307 - 1230285 - | membrane-bound metal-dependent hydrolase TERM 607 1231499 - 1231555 + H 77 -11.4 -3.74693 | opp_overlap 1231499 1231501 CACGGAGTTGCCAAA CACGAGCACGGTGTGCAGGCACACCG CAGCA CGATGTGACTGCACATCGACCCCGGG TTTGATGAACTCGAC TERM 608 1231555 - 1231499 - H 81 -14.3 -3.55761 | opp_overlap 1231499, overlap 1231501 CACGGAGTTGCCAAA CACGAGCACGGTGTGCAGGCACACCGC AGC ACGATGTGACTGCACATCGACCCCGGG TTTGATGAACTCGAC TERM 609 1231553 - 1231501 - H 88 -15.5 -3.35597 | opp_overlap 1231499, overlap 1231499 CGGAGTTGCCAAACA CGAGCACGGTGTGCAGGCACACCGC AGC ACGATGTGACTGCACATCGACCCCG GGTTTGATGAACTCG TERM 610 1232289 - 1232307 + G 76 -7.4 -4.43309 | overlap 1232290 TCCCGGCGAGCGACC CTTCGGCT CGT AGCCGAAC TTTTCCTTGAACTTG Lcho_1150 1231596 - 1232387 + | hypothetical protein TERM 611 1232429 - 1232406 - T 70 -13.8 -2.52464 | CCTCGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGACCTGAAGGGCC TERM 612 1232501 - 1232478 - T 70 -13.8 -2.52896 | opp_overlap 1232477 1232476 1232494 GCACGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACTTGATCGTCTTGT Lcho_1151 1233180 - 1232470 - | hypothetical protein TERM 613 1233216 - 1233193 - H 70 -13.8 -2.52676 | CATTGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGCCAGTCGAGGCG TERM 614 1233287 - 1233264 - H 70 -13.8 -2.53015 | overlap 1233252 ACAGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGGACATGACGACC TERM 615 1233360 - 1233337 - H 70 -13.8 -2.52896 | GGATGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGACACGACGAGCG Lcho_1152 1233388 - 1234299 + | hypothetical protein TERM 616 1234363 - 1234340 - T 70 -13.8 -2.52543 | opp_overlap 1234337 ACTGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGTTCTACAGCACC TERM 617 1234436 - 1234413 - T 70 -13.8 -2.52464 | opp_overlap 1234387 CCGTGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACATGCGCAGCTGCA TERM 618 1234508 - 1234485 - T 70 -13.8 -2.52676 | CACGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCCAAGACCATTGC TERM 619 1234544 - 1234515 - T 85 -16.6 -3.07816 | opp_overlap 1234514 1234513 1234517, overlap 1234517 CGGCGAGCGACCCAA GACCATTGCGAG CACATC CTCGCAATGGTC GGTTTCAATCCACGC TERM 620 1234542 - 1234517 - T 72 -13.4 -3.09878 | opp_overlap 1234517 1234514 1234513, overlap 1234515 GCGAGCGACCCAAGA CCATTGCGAG CACATC CTCGCAATGG TCGGTTTCAATCCAC TERM 621 1234580 - 1234557 - T 70 -13.8 -2.52464 | GTCGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCCCGCGATCTGGC TERM 622 1234651 - 1234628 - T 70 -13.8 -2.53015 | opp_overlap 1234635 1234637 AGATGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCGGCTGTCAGGCC TERM 623 1234722 - 1234699 - T 70 -13.8 -2.52464 | opp_overlap 1234714 GCGTGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGCAGTGCTGTCGT TERM 624 1234794 - 1234771 - T 70 -13.8 -2.53382 | AGCAGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGTCCTCGGCTTCG TERM 625 1234867 - 1234844 - T 70 -13.8 -2.52464 | CGGTGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCCGGTGCTGGTGG TERM 626 1234938 - 1234915 - T 70 -13.8 -2.52464 | GCCGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACAGCGTTTCACCGG TERM 627 1235010 - 1234987 - T 70 -13.8 -2.53263 | TCGAGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACACTGCTCAGTTGG TERM 628 1235080 - 1235057 - T 70 -13.8 -2.52795 | opp_overlap 1235024 1235023 AAGGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCCATCCATCTCCA TERM 629 1235152 - 1235129 - T 70 -13.8 -2.52464 | TGTTGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGACGGGGGCGTCG TERM 630 1235224 - 1235201 - T 70 -13.8 -2.52543 | opp_overlap 1235205 ACGGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACTGGCGTTGTGGGG TERM 631 1235295 - 1235272 - T 70 -13.8 -2.52896 | TCAGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCCACGAGTCATGA TERM 632 1235368 - 1235345 - T 70 -13.8 -2.52676 | GACGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACTAGCCGACCATTC TERM 633 1235440 - 1235417 - T 70 -13.8 -2.52464 | GTCGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACAGCAGGCCGCAGG TERM 634 1235512 - 1235489 - T 70 -13.8 -2.52464 | CGCGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACAAAGGGGCGCTTG TERM 635 1235584 - 1235561 - T 70 -13.8 -2.52676 | CAGGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACTCGATCACCTGCT TERM 636 1235656 - 1235633 - T 70 -13.8 -2.52464 | CGGTGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCGGGGCCGGTGAA TERM 637 1235727 - 1235704 - T 70 -13.8 -2.52464 | GCTTGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCGTGCATCACGCT TERM 638 1235798 - 1235775 - T 70 -13.8 -2.52543 | opp_overlap 1235791 1235794 ATCTGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCCAGCCGCCCTTC TERM 639 1235871 - 1235848 - T 70 -13.8 -2.52464 | CGGTGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCTGGCGCGGTTCG TERM 640 1235943 - 1235920 - T 70 -13.8 -2.53263 | GCGAGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACTTGCCGTAGGCCA TERM 641 1236015 - 1235992 - T 70 -13.8 -2.52896 | CCATGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGGCCGGTGGTGGT TERM 642 1236087 - 1236064 - T 70 -13.8 -2.52464 | opp_overlap 1236063 1236062 CGCCGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACTTTCGGCGGCACG TERM 643 1236158 - 1236135 - T 70 -13.8 -2.52464 | opp_overlap 1236114 CCGCGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGGCCATGGGGGCT TERM 644 1236230 - 1236207 - T 70 -13.8 -2.52464 | CTTGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGTGCTGGGCGGCA TERM 645 1236302 - 1236279 - T 70 -13.8 -2.52464 | opp_overlap 1236272 1236292 1236293 1236294 CCGCGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGGGCTGTTCTTGC TERM 646 1236374 - 1236351 - T 70 -13.8 -2.52896 | TCATGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCGGTGCGTGGGCA TERM 647 1236445 - 1236422 - T 70 -13.8 -2.52464 | opp_overlap 1236401 1236420 1236423 TGGCGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACTCCTTGGGGTTGG TERM 648 1236517 - 1236494 - T 70 -13.8 -2.52464 | opp_overlap 1236473 1236510 GGCTGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCCCTGCGCCGCGT TERM 649 1236510 - 1236548 + T 71 -10.8 -3.61609 | opp_overlap 1236494 GCCCGCCAGTTTCCC GGCGAGCGACCCCTGCGC CGC GTGCAGAGCACGCTCGAC TTGTCGTTTCAATCC TERM 650 1236588 - 1236565 - T 70 -13.8 -2.52464 | TGTCGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCTTGCATGACCTG TERM 651 1236659 - 1236636 - T 70 -13.8 -2.52896 | overlap 1236618 CGAGGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACCCAGTCACAGTGG TERM 652 1236730 - 1236707 - T 70 -13.8 -2.53263 | CGCAGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACATCGCTACCCGCC TERM 653 1236802 - 1236779 - T 70 -13.8 -2.52795 | opp_overlap 1236794 AACCGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACGACGTTGGATCGC TERM 654 1236873 - 1236850 - T 70 -13.8 -2.53263 | GGCAGTTTCAATCCA CGCCCGCCAG TTTC CCGGCGAGCG ACTCCGCGTGTCCAA Lcho_1153 1237354 - 1237064 - | CRISPR-associated Cas2 family protein Lcho_1154 1238398 - 1237367 - | CRISPR-associated Cas1 family protein Lcho_1155 1239036 - 1238398 - | CRISPR-associated Cas4 family protein Lcho_1156 1239096 - 1239341 + | addiction module antitoxin Lcho_1157 1239350 - 1239643 + | plasmid stabilization system protein Lcho_1158 1240569 - 1239661 - | CRISPR-associated Csd2 family protein Lcho_1159 1242383 - 1240596 - | CRISPR-associated RAMP Csd1 family protein TERM 655 1240708 - 1240675 - G 81 -2.3 -5.00616 | gap 1, overlap 1240677 1240678 1240700 TTCTTGGTGAAAAAA GACTGGCGCTGGTGGT AGT AAC-CCAGCGCGAAGC GGCCCTGATCGGGCA Lcho_1160 1243036 - 1242380 - | CRISPR-associated Cas5 family protein TERM 656 1242779 - 1242769 - G 76 -8.2 -4.17089 | opp_overlap 1242778, overlap 1242760 CGTAAAGGCCCAAAA CGGC CGA GCCG CCTTGCATGGCGTTC TERM 657 1243044 - 1243028 - G 70 -2.1 -4.56358 | GACATCGAGACAAAA GCTCAGC ATT GATGGGC CTCCCTGATGACGTT TERM 658 1243100 - 1243077 - R 79 -6.6 -4.46775 | gap 1, overlap 1243081 GATTCAAAACACAAA GGCA-GCCGGG TCA CCCGGAGCGCC GCCGACCTGGACGCC Lcho_1161 1245449 - 1243065 - | DEAD/DEAH box helicase domain-containing protein TERM 659 1245516 - 1245526 + H 74 -2.4 -4.83615 | opp_overlap 1245483, overlap 1245517 TCACCACGCGCACCA CCCG ACC CGCG TTTTTGTAACGCCTG TERM 660 1245517 - 1245546 + H 72 -2.8 -4.70879 | gap 1, opp_overlap 1245483, overlap 1245516 CACCACGCGCACCAC CCG-ACCCGCGTT TTTGT AACGCCTGTGCGG TTTTTCCACTTTGCG TERM 661 1246252 - 1246232 - g 73 -14.7 -3.15663 | overlap 1246215 ACGCAGGTCTACGAA GACCTGGCG CGG CGCCAGGCC ACGCAGGCACGCAAG TERM 662 1246426 - 1246480 + G 75 -15.7 -3.05935 | gap 2 CGGCCGGATCGACGA GCTGGTGCGCGACGCGC-T-GCGCGGC TCG GCCGCGTGATGTGCGTCGGGCGCCGGG TTCACTGCACCGTGT Lcho_1162 1245749 - 1246462 + | methyl-accepting chemotaxis sensory transducer Lcho_1163 1247501 - 1246482 - | Hsp33 protein Lcho_1164 1248029 - 1247505 - | hexapaptide repeat-containing transferase TERM 663 1248842 - 1248877 + G 100 -22.6 -3.53012 | gap 1 GGCGCCGCGGCTGCG CCCGCCGCTCAACCGCG CGG CGCGGCTG-GCGGCGGG TTTCAGCGAGGCCGA Lcho_1165 1248093 - 1248926 + | hypothetical protein TERM 664 1249732 - 1249696 - g 75 -17.1 -2.62616 | TCACGGCCGAGATGA GCGCGCAGCGGCGCGGC GGT GCAGCGCCGCCGCTTGC GCCCAGGGCCTGCCC Lcho_1166 1248933 - 1249817 + | Ion transport protein Lcho_1167 1250441 - 1249839 - | multiple antibiotic resistance (MarC)-related protein Lcho_1168 1250936 - 1250475 - | hypothetical protein Lcho_1169 1251019 - 1252050 + | endonuclease/exonuclease/phosphatase TERM 665 1252632 - 1252687 + G 71 -14.8 -3.06696 | gap 3 AGCCGGTTTTGCGGT GGTGCAGTGCGGCGTGCGCAACCTCGC CATCA GCGAGGCCGC-CGCGCCGCAC-G-ACC TGTATTACGCGCCCG TERM 666 1253200 - 1253258 + G 76 -11.4 -3.85698 | overlap 1253202 1253204 CGCATGCGCGAGGTG CTGAGCGGCTGCGGCGCGACCCGGTTGG AGG TCAGCCGCGACGAGGCGCAGCGGCTGCG TTTCTGGAGCGGGCG Lcho_1170 1252174 - 1253763 + | FAD linked oxidase domain-containing protein Lcho_1171 1253770 - 1254897 + | FAD linked oxidase domain-containing protein TERM 667 1255521 - 1255470 - g 80 -17.2 -3.14132 | gap 1 GGGCCCGGGCATCAA CCCGGCCACCGCGCGGGTGCTCGAC GCC GCCG-GCATCCAGGCGGTGACCGCG CCCAAGGCCGGCTGC Lcho_1172 1254913 - 1256169 + | hypothetical protein TERM 668 1256210 - 1256192 - T 100 -13.1 -5.14563 | opp_overlap 1256192 GCGCCCATGAAAAAA GGCGCCG GTTCG CGGCGCC TTCTCGTGTGGCCGG TERM 669 1256192 - 1256210 + T 78 -13.1 -3.46602 | opp_overlap 1256192 GCGCCCATGAAAAAA GGCGCCG GTTCG CGGCGCC TTCTCGTGTGGCCGG Lcho_1173 1256524 - 1256240 - | septum formation initiator Lcho_1174 1257814 - 1256531 - | phosphopyruvate hydratase Lcho_1175 1258785 - 1257928 - | 2-dehydro-3-deoxyphosphooctonate aldolase Lcho_1176 1260473 - 1258782 - | CTP synthase TERM 670 1260610 - 1260663 + r 70 -11 -3.35679 | overlap 1260613 TGGCTGCGTGCAGGC CTTCCGCAGGTCGGTCCGGTG-CCCG GGGC CGGGCCGCCGGATCAGCCTTCG-AGG TTGTCGATCAGCCGG Lcho_1177 1261511 - 1260651 - | pantoate--beta-alanine ligase Lcho_1178 1262394 - 1261525 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase Lcho_1179 1262800 - 1264035 + | cellulose biosynthesis protein CelD Lcho_1180 1264894 - 1264067 - | hypothetical protein Lcho_1181 1267551 - 1264891 - | DNA mismatch repair protein MutS Lcho_1182 1267942 - 1268160 + | hypothetical protein Lcho_1183 1268261 - 1269562 + | membrane protein-like protein Lcho_1184 1270094 - 1269588 - | MarR family transcriptional regulator TERM 671 1270010 - 1270033 + g 76 -7.4 -4.38154 | gap 1 GCGTCGTCAGGCCTT CCGTCTCCACG GCG CGTG-AGCCGG TTTTGTGCAACATGT Lcho_1185 1270266 - 1271033 + | 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase TERM 672 1271494 - 1271461 - g 70 -12.5 -3.28924 | gap 1 CATCGCCTCCGAGAA GGCCATCTTC-GGCCA GGT CGGCCCGAAGATGGGC TCGGTCGATCCGGGC Lcho_1186 1271078 - 1271866 + | 2-ketocyclohexanecarboxyl-CoA hydrolase TERM 673 1271953 - 1271971 + G 90 -11.6 -4.37886 | TGCGCCGCTTTGCGA CCGAGCGC GTG GCGCCCGG TTTTCTGGAGCGTGA Lcho_1187 1271886 - 1273055 + | cyclohexanecarboxyl-CoA dehydrogenase TERM 674 1274172 - 1274138 - g 80 -9.9 -4.21194 | overlap 1274159 GGGCATGACCGAAAA CGGCGCCGTCACGCT GATCA AGCTCGACGACGACG ACCAACGCGCCTTCA Lcho_1188 1273092 - 1274735 + | cyclohexanecarboxylate-CoA ligase TERM 675 1275461 - 1275479 + G 75 -5.9 -4.57073 | overlap 1275463 GCTGCTGGCGGTGGC CAGCGAC AAGAA GTCGCCG TTTTTCCCCGACGTG Lcho_1189 1274769 - 1275761 + | hypothetical protein Lcho_1190 1275801 - 1276577 + | enoyl-CoA hydratase/isomerase Lcho_1191 1276622 - 1277782 + | acyl-CoA dehydrogenase domain-containing protein TERM 676 1278318 - 1278270 - g 80 -17.4 -3.21099 | gap 2 GTGCTGTACGACGAA CGCGGCGCGGTGCGCGGCGTGGCC ACC GGCAACGTCG-GCATCG-GCCGCG ACGGCCAGCCGCACG Lcho_1192 1277799 - 1279484 + | electron-transferring-flavoprotein dehydrogenase Lcho_1193 1279553 - 1280737 + | acyl-CoA dehydrogenase domain-containing protein Lcho_1194 1280751 - 1281500 + | electron transfer flavoprotein alpha/beta-subunit TERM 677 1282180 - 1282156 - g 73 -13.6 -3.29511 | gap 1 GCCACTGGCCGACAA GCTTGGCGCCG CACT CGGCGCCA-GC CGTGCCGCCGTCGAC Lcho_1195 1281503 - 1282429 + | electron transfer flavoprotein alpha subunit Lcho_1196 1282432 - 1283217 + | enoyl-CoA hydratase/isomerase TERM 678 1283513 - 1283502 - g 70 -2.2 -4.58395 | GCGATCGTCGAAAAA CTCG ACGC CAAG CAGGCCTTGTTGCGG Lcho_1197 1283214 - 1284728 + | 3-hydroxybutyryl-CoA dehydrogenase Lcho_1198 1284725 - 1285930 + | beta-ketoadipyl CoA thiolase Lcho_1199 1286888 - 1285956 - | AraC family transcriptional regulator TERM 679 1287101 - 1287154 + G 93 -23.1 -2.50816 | gap 1, overlap 1287101 GCGTGTGCGTCGTCA CCGGCGCGGCCAGCGGCATCGGCCGC GCG GTGGCCGA-GTCGCTCGCCGCTGCGG GTTCGTGGGTCGCGC TERM 680 1287101 - 1287155 + G 100 -22.9 -3.18383 | overlap 1287101 GCGTGTGCGTCGTCA CCGGC-GCGGCCAGCGGCATCGGCCGC GCG GTGGCCGA-GTCGCTCGCCGCTGCGGG TTCGTGGGTCGCGCT TERM 681 1287284 - 1287268 - g 70 -13.7 -3.1994 | overlap 1287260 1287271 GACATCACCGATGAA GCAGCGG TGG CCGCTGC GGCGCAGCGCGTGCG Lcho_1200 1287028 - 1287891 + | short-chain dehydrogenase/reductase SDR Lcho_1201 1287888 - 1289591 + | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein Lcho_1202 1289588 - 1289950 + | NIPSNAP family protein Lcho_1203 1289947 - 1290744 + | short-chain dehydrogenase/reductase SDR TERM 682 1291214 - 1291251 + G 70 -12.7 -3.32844 | gap 1 CGGTGATCGGCGTCG GCGCGGCCGTGGCGATCG GCC TGA-CGCTGTGGCTGCGC TTCTCGCGTGCCGGC TERM 683 1291350 - 1291398 + G 70 -12.9 -3.28912 | GAGCGCCTTCGTGGT CGGCCTCGGCACCGCGCTAGCCG GCC TGGCCGGGGTGGTGGCGGCGCCG TTCCTGTCGCTGTCG Lcho_1204 1290784 - 1291632 + | inner-membrane translocator Lcho_1205 1291654 - 1292655 + | inner-membrane translocator Lcho_1206 1292672 - 1293391 + | ABC transporter-related protein Lcho_1207 1293388 - 1294086 + | ABC transporter-related protein TERM 684 1295114 - 1295093 - g 75 -12.9 -3.63569 | opp_overlap 1295113 CGAAGGTGTCAAGAA GGCCGGCAG TGCC CAGCCGGCC GATGTGGCCAAGGCC Lcho_1208 1294122 - 1295312 + | extracellular ligand-binding receptor TERM 685 1295335 - 1295363 + F 83 -14.6 -3.18264 | gap 1 CAGCTGAACCCGCAA GGCGAGGGTGGGG CGCA CCCC-CCTTCGCC TTGATGACTGGAACG Lcho_1209 1295384 - 1295971 + | hemerythrin HHE cation binding domain-containing protein Lcho_1210 1296094 - 1296354 + | hypothetical protein TERM 686 1296361 - 1296391 + F 84 -11.8 -3.97139 | overlap 1296363 AAGTCCTGATCGCTG AATGGGCGCTGTGC CTT GCGCAGCGCCAATC TTGTTCTTCCACTTG TERM 687 1296363 - 1296389 + F 84 -14.4 -3.5672 | overlap 1296361 GTCCTGATCGCTGAA TGGGCGCTGTGC CTT GCGCAGCGCCAA TCTTGTTCTTCCACT Lcho_1211 1296419 - 1296955 + | cytochrome B561 Lcho_1212 1298539 - 1296968 - | coenzyme A transferase Lcho_1213 1299696 - 1298536 - | acyl-CoA dehydrogenase domain-containing protein Lcho_1214 1300847 - 1299705 - | extracellular ligand-binding receptor TERM 688 1300176 - 1300218 + g 73 -14.8 -3.14132 | opp_overlap 1300191 GGCCGATTCTTCTTC GGTCAGGTAGACGAACACCG CGT CGGCGTTGGCCTGCCTGGCC TTGATGACGGCGGCC TERM 689 1301303 - 1301291 - g 71 -6.9 -4.18018 | GGTGCTGATGGAAAA GCCGG TGG CCGAC ACGGTGGCCGATGCG Lcho_1215 1300941 - 1302047 + | oxidoreductase domain-containing protein Lcho_1216 1302113 - 1302925 + | xylose isomerase domain-containing protein Lcho_1217 1302922 - 1303725 + | short-chain dehydrogenase/reductase SDR Lcho_1218 1305052 - 1303757 - | inositol-phosphate phosphatase TERM 690 1303986 - 1304019 + g 85 -14.5 -3.73953 | TCGGCCCAGATTTCT TCGGCGCCGTCGTCG CCGG CGTCAACGGCGTCGA TTTCATCGGCCTCGT Lcho_1219 1305199 - 1305957 + | RNA methyltransferase Lcho_1220 1306065 - 1306844 + | serine O-acetyltransferase Lcho_1221 1307457 - 1306837 - | molybdenum cofactor synthesis domain-containing protein Lcho_1222 1308103 - 1307450 - | hypothetical protein Lcho_1223 1308308 - 1309732 + | peptidase U62 modulator of DNA gyrase TERM 691 1309774 - 1309797 + F 70 -5.3 -4.41206 | gap 2, opp_overlap 1309773 1309774 1309776, overlap 1309777 TTGCGCAGGGGAAAG CACC--CGGCC GGGT GGCCGATGGTG TTTTCTAGAATCATT Lcho_1224 1309852 - 1310934 + | TRAP dicarboxylate transporter- DctP subunit TERM 692 1310982 - 1311018 + F 100 -11.5 -5.47821 | overlap 1310983 GCGGAGCCCGACCCG AGACCCCGTGCGGCC CGTTGAC GGCTTCACGGGGTCA TTTTTTTGCCTGCCT TERM 693 1310983 - 1311017 + F 91 -15 -3.87608 | overlap 1310982 CGGAGCCCGACCCGA GACCCCGTGCGGCC CGTTGAC GGCTTCACGGGGTC ATTTTTTTGCCTGCC Lcho_1225 1311046 - 1311966 + | hypothetical protein Lcho_1226 1311999 - 1312790 + | short-chain dehydrogenase/reductase SDR Lcho_1227 1313771 - 1312818 - | hypothetical protein TERM 694 1312983 - 1312947 - G 87 -17.9 -3.54424 | overlap 1312928 1312916 CGTGAGGTTGGCAAA CACGCCGGCGGTGGCCG GCC CGGCCAGCGCCACCGCG CGACCCCAGAAGCCG Lcho_1228 1313935 - 1314918 + | alcohol dehydrogenase Lcho_1229 1315029 - 1317017 + | TonB-dependent receptor plug Lcho_1230 1317039 - 1317596 + | putative transmembrane protein TERM 695 1318226 - 1318276 + G 84 -19 -2.87344 | gap 2 TACCTGTTCGCCGTC GGCGTGCGGCGCGACGTGCGCCGC ATCGA GCGGCGCATG-CGCGAC-CTCGCC TATGTCGACACCGTC Lcho_1231 1317593 - 1319593 + | diguanylate cyclase/phosphodiesterase Lcho_1232 1319914 - 1319609 - | hypothetical protein Lcho_1233 1320794 - 1319925 - | integral membrane protein TERM 696 1320622 - 1320570 - G 75 -14.9 -3.29263 | gap 1, overlap 1320571 ACACGCGCCGTAGAA GGTG-CCGATGCCGGGGTGGCGCA GGTAGT CGCGCCAGCCCAGCATCAGCCAGC GCAGCGGGTCGCCCC TERM 697 1320619 - 1320571 - G 75 -17.5 -2.57344 | gap 1, overlap 1320570 CACGCGCCGTAGAAG GTGCCGATGCCGGGGTGGCGCA GGTAGT CGCGCCAGCCCAGCATCAGC-C AGCGCAGCGGGTCGC Lcho_1234 1321394 - 1320882 - | lipoprotein signal peptidase Lcho_1235 1322332 - 1321445 - | aldo/keto reductase Lcho_1236 1325376 - 1322380 - | isoleucyl-tRNA synthetase TERM 698 1325130 - 1325109 - G 70 -13.7 -3.17051 | overlap 1325107 1325110 CGTGCAGCACGAACA GCGGCGCGT CGCG ACGCGCCAC GCGCAGGCGCTGGTA Lcho_1237 1326526 - 1325489 - | riboflavin biosynthesis protein RibF TERM 699 1326369 - 1326351 - G 95 -4.4 -5.42862 | ACAGTGGCAAAAAAA TCGCGCGG ATG CGGCTCGA AGCTCAGCACGCAGC Lcho_1238 1327196 - 1326564 - | putative fructose transport system kinase Lcho_1239 1328356 - 1327217 - | acyl-CoA dehydrogenase domain-containing protein Lcho_1240 1329509 - 1328370 - | acyl-CoA dehydrogenase domain-containing protein TERM 700 1328509 - 1328452 - G 72 -12.6 -3.53012 | gap 3, overlap 1328454 TTGCGCTGGTTGAAA TAGCGCGACGCCGGCGCCTC-GGGCCCGC ACG GCAGGCCTTGCGGC-CCGGCGGCGAGC-A TCGTCAGCTCGGCCA TERM 701 1328508 - 1328454 - G 86 -17.7 -3.34398 | overlap 1328452 GCGCTGGTTGAAATA GCGCGACGCCGGCGCCTC-GGGCCCGC ACG GCAGGCCTTGCGGC-CCGGCGGCGAGC ATCGTCAGCTCGGCC TERM 702 1329544 - 1329562 + r 79 -6.6 -4.56597 | GCCGCGGGCCGGACA TCCGGGCG GCA CGTCAGGA TTTTTAGCACGCGCG Lcho_1241 1330343 - 1329648 - | peptidase aspartic family TERM 703 1330469 - 1330486 + r 71 -7.7 -4.09805 | overlap 1330475 GGAAGTTGTTGAAGC TCAGCGG GTAG TCGCTGA TTTCCTTCTTGATCA Lcho_1242 1330952 - 1330446 - | hypothetical protein Lcho_1243 1330961 - 1331995 + | UDP-N-acetylenolpyruvoylglucosamine reductase Lcho_1244 1333250 - 1332021 - | rare lipoprotein A Lcho_1245 1334379 - 1333276 - | NADH:flavin oxidoreductase/NADH oxidase TERM 704 1334080 - 1334129 + g 76 -16.6 -2.78935 | gap 3 GAGCTGGATCACGAT TCGCCCGCCTTGCG-CGTGT-ACCG CGT CGGTCACGCGGCGCCAGGCGG-CGA TCTGCTCGGGGCTGT Lcho_1246 1335200 - 1334436 - | exodeoxyribonuclease III Xth Lcho_1247 1335629 - 1335267 - | hypothetical protein Lcho_1248 1337162 - 1335681 - | deoxyribodipyrimidine photo-lyase Lcho_1249 1338456 - 1337194 - | deoxyribodipyrimidine photolyase-like protein TERM 705 1338054 - 1338107 + g 90 -16.6 -3.72576 | gap 2 CCGCCTCGTCGATGA CCGGCACGCCGGTGCGCGCCTGGCGG ATGT CGGCC-GGCA-GCACCGGCGCGCAGG TTTCATCCGGGCGCG Lcho_1250 1340000 - 1338459 - | deoxyribodipyrimidine photolyase-related protein TERM 706 1339120 - 1339081 - G 82 -14.2 -3.72695 | gap 1 ATCTGGCGCACGAAA CCTTCCACGCTGGC-CAGC GGC GCCGCGCCCGCGCGGTAGG CGGCGACGGCCGCGT Lcho_1251 1340160 - 1339993 - | hypothetical protein Lcho_1252 1340934 - 1340296 - | methyltransferase type 11 Lcho_1253 1341067 - 1341528 + | rhodanese domain-containing protein Lcho_1254 1341543 - 1342286 + | Crp/FNR family transcriptional regulator Lcho_1255 1342359 - 1342862 + | deoxyinosine 3'endonuclease (endonuclease V) Lcho_1256 1343466 - 1342900 - | hypothetical protein Lcho_1257 1343600 - 1344607 + | cation diffusion facilitator family transporter TERM 707 1344676 - 1344711 + F 84 -12.7 -3.73414 | gap 2, overlap 1344678 1344701 TCCGATCCCCGTGTC CA-CCGCGC-CACGCAG CTGA CTGCGTGAGCGTGGCTG TTTCGCTCTGATCTG TERM 708 1344678 - 1344708 + F 78 -15.5 -2.6621 | gap 1, overlap 1344676 1344701 CGATCCCCGTGTCCA CCGCGC-CACGCAG CTGA CTGCGTGAGCGTGG CTGTTTCGCTCTGAT TERM 709 1345121 - 1345135 + G 75 -12.8 -3.63515 | ACCGAAGACCTGGGC GGCGGC ATG GCCGCC TTCTTCAACGTCGAG Lcho_1258 1344905 - 1345873 + | porin TERM 710 1345881 - 1345912 + T 100 -13 -4.63527 | gap 1 GCTTCTGATGTGCCG GCCCTGATCGCCCGG GTG TCGGGAG-TCAGGGC TTTTTGCGATGGTGC Lcho_1259 1346406 - 1345906 - | dihydrofolate reductase TERM 711 1345931 - 1345970 + g 100 -20.8 -3.53012 | overlap 1345935 TTGCGATGGTGCACG CGTTCGTAGCCGATGGCA TCAC TGCCATCGGCTGCGTGCG TTTCGCGGGACAGCA TERM 712 1345935 - 1345966 + g 88 -21 -2.64155 | overlap 1345931 GATGGTGCACGCGTT CGTAGCCGATGGCA TCAC TGCCATCGGCTGCG TGCGTTTCGCGGGAC Lcho_1260 1347251 - 1346403 - | thymidylate synthase Lcho_1261 1347703 - 1347335 - | type IV pilus assembly PilZ Lcho_1262 1349505 - 1347700 - | ABC transporter-related protein TERM 713 1349574 - 1349591 + H 73 -9.8 -3.86202 | opp_overlap 1349540 CGGCGCCCGGACCAC GCGCCG GTCGTG CGGCGC TTTCATATACTGCGC Lcho_1263 1349610 - 1350077 + | hypothetical protein Lcho_1264 1350197 - 1350598 + | multi-Cu oxidase TERM 714 1350677 - 1350713 + G 85 -13.6 -4.10657 | gap 1, overlap 1350679 CGCGCTGACCCTGGC GCTCGGCGGCTGCGCCG GCAT CGGCTCGGCCGACG-GC TTTTCAGCGGTCTCC Lcho_1265 1350588 - 1352033 + | outer membrane efflux protein TERM 715 1352292 - 1352264 - g 72 -12.3 -3.71848 | overlap 1352217 1352216 CTGGCGCATGAACAA CGGCGTCAAGGAG TTC CACCTCGTCGCCG AGCCCGTGGTGCGCG Lcho_1266 1352052 - 1353464 + | multicopper oxidase type 3 Lcho_1267 1353493 - 1354008 + | blue (type1) copper domain-containing protein Lcho_1268 1354005 - 1354514 + | hypothetical protein Lcho_1269 1355280 - 1354531 - | hypothetical protein Lcho_1270 1355843 - 1355277 - | ECF subfamily RNA polymerase sigma-24 factor TERM 716 1355881 - 1355853 - R 78 -14 -3.23395 | ATGCATGAGCATGAA CCTGATCATAGG TCGAG CCCATGATCAGG CGAGCGCCGGTCGTC Lcho_1271 1356479 - 1355895 - | hypothetical protein Lcho_1272 1358247 - 1356601 - | ABC transporter-related protein Lcho_1273 1359359 - 1358244 - | binding-protein-dependent transport systems inner membrane component Lcho_1274 1360393 - 1359356 - | binding-protein-dependent transport systems inner membrane component Lcho_1275 1360840 - 1360418 - | hypothetical protein Lcho_1276 1361222 - 1360833 - | DNA polymerase beta subunit Lcho_1277 1363144 - 1361219 - | extracellular solute-binding protein Lcho_1278 1363957 - 1363268 - | hypothetical protein Lcho_1279 1365278 - 1364049 - | hypothetical protein Lcho_1280 1365645 - 1365337 - | hypothetical protein Lcho_1281 1365779 - 1366093 + | hypothetical protein Lcho_1282 1368659 - 1366098 - | hypothetical protein Lcho_1283 1369438 - 1368677 - | beta-lactamase domain-containing protein TERM 717 1368793 - 1368752 - G 70 -13.6 -3.16564 | gap 1 CGCCCAGTCGATGAA CTCCTGCACGGCTGCGCCG GCCAG CGGCGC-GCCGTGCTGCGG CACGATCATGCGGAT TERM 718 1369496 - 1369484 - R 79 -6.9 -4.56597 | CCCGGGCGTGAAAAA CGCAC TGT GCGCG ACCCGATCATGCCGC TERM 719 1369611 - 1369557 - R 79 -14.9 -2.98823 | GTTGTCTCAGACAGA CGCGACGCCGTCGGCGCGCAG-CCG CAGCACC CGGTCGGCGCGC-GCCGCCGCCGCG GCCGAGTGGGTCACG Lcho_1284 1370243 - 1369548 - | ABC transporter-related protein Lcho_1285 1371226 - 1370240 - | tRNA delta(2)-isopentenylpyrophosphate transferase Lcho_1286 1372466 - 1371219 - | Bcr/CflA subfamily drug resistance transporter Lcho_1287 1372610 - 1373035 + | hypothetical protein Lcho_1288 1373039 - 1374031 + | hypothetical protein Lcho_1289 1374497 - 1374066 - | hypothetical protein TERM 720 1374524 - 1374551 + H 100 -19.9 -5.47218 | CTCAGCCTGAGCCGC CCGGCACCCGC CTTGTC GCGGGTGCCGG TTTTTTTGACTGCCG Lcho_1290 1374576 - 1375169 + | nitroreductase TERM 721 1375318 - 1375360 + G 75 -14.9 -3.30124 | gap 1, overlap 1375348 GGTGCCGCAGGCCGC GGCCATCATG-CTGCCGCTG CTGG CGGTGGCCGACGTGATGGCC TTGTGGACGCTGCGC Lcho_1291 1375169 - 1375927 + | hypothetical protein TERM 722 1376737 - 1376725 - g 84 -10.5 -4.18018 | CGCCTTCATCGAAAA GCGCG CCC CGCGC TTCACCGGCGCCTGA Lcho_1292 1375961 - 1376752 + | enoyl-CoA hydratase/isomerase TERM 723 1377039 - 1377059 + G 74 -4.5 -4.55287 | overlap 1377047 GGCGCTGATGCTCTA CCTGGCCAC GCT GCGGGCGGG TTTTGTCTACCTGCC Lcho_1293 1376821 - 1378353 + | AMP-dependent synthetase and ligase TERM 724 1380149 - 1380110 - g 85 -17 -3.56643 | overlap 1380111 GCCACACCGGCCAAA CCGGCGGCAACGCCGGCC AACC GGCCGGCGCCTGCGCCGA AACGGGCTGCCGCTG TERM 725 1380148 - 1380111 - g 79 -18.3 -2.73771 | overlap 1380110 CCACACCGGCCAAAC CGGCGGCAACGCCGGCC AACC GGCCGGCGCCTGCGCCG AAACGGGCTGCCGCT Lcho_1294 1378496 - 1380223 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Lcho_1295 1380245 - 1381951 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Lcho_1296 1383781 - 1381964 - | potassium efflux system protein Lcho_1297 1384422 - 1383778 - | NAD(P)H dehydrogenase (quinone) Lcho_1298 1384566 - 1385240 + | putative partition-related protein TERM 726 1385743 - 1385772 + G 72 -12.9 -3.54424 | gap 1, overlap 1385745 GGCCTGGGCGGGCCG AACCTGC-CGTCGG TGC CCGACGCGCAGGTG TTTCCGGGCCTGCCG TERM 727 1385745 - 1385770 + G 75 -15.5 -3.35046 | gap 1, overlap 1385743 CCTGGGCGGGCCGAA CCTGC-CGTCGG TGC CCGACGCGCAGG TGTTTCCGGGCCTGC Lcho_1299 1385335 - 1386156 + | two component LuxR family transcriptional regulator Lcho_1300 1386153 - 1387559 + | histidine kinase Lcho_1301 1387683 - 1388573 + | branched-chain amino acid aminotransferase Lcho_1302 1388595 - 1388801 + | hypothetical protein Lcho_1303 1388924 - 1389811 + | formyltetrahydrofolate deformylase Lcho_1304 1389852 - 1390268 + | hypothetical protein TERM 728 1390815 - 1390859 + G 71 -15.8 -2.62616 | gap 2 CGCTGGGCGGCAATG CC-CTGCTGCGCTG-GGCCG AGGAGGC CGGCCACAGCGCGGCGGCGG TGGTCTCGGCGGTGG Lcho_1305 1390268 - 1391407 + | hypothetical protein Lcho_1306 1391400 - 1391960 + | hypothetical protein TERM 729 1392003 - 1391986 - T 100 -12.7 -4.7497 | opp_overlap 1391986 CGCAGGCATGAAAAA GCCGACC CTCG GGTCGGC TTCGTGTGCAGGCCG TERM 730 1391986 - 1392003 + T 74 -12.7 -3.25823 | opp_overlap 1391986 CGCAGGCATGAAAAA GCCGACC CTCG GGTCGGC TTCGTGTGCAGGCCG Lcho_1307 1392575 - 1392051 - | cytochrome c class I TERM 731 1392804 - 1392835 + H 86 -15.2 -3.53012 | opp_overlap 1392808 1392810, overlap 1392810 CGGCACCCCGCCGAA GCAAGACGCCAACC GAGA GGTTGGCGTTCTGC TTTCGGGCCCCGCAA TERM 732 1392831 - 1392808 - H 70 -11 -3.33815 | opp_overlap 1392804 1392810, overlap 1392810 ACCCCGCCGAAGCAA GACGCCAACC GAGA GGTTGGCGTT CTGCTTTCGGGCCCC TERM 733 1392810 - 1392829 + H 84 -13.6 -3.60151 | opp_overlap 1392810 1392808, overlap 1392804 CCCGCCGAAGCAAGA CGCCAACC GAGA GGTTGGCG TTCTGCTTTCGGGCC TERM 734 1392829 - 1392810 - H 78 -13.6 -3.23853 | opp_overlap 1392804 1392810, overlap 1392808 CCCGCCGAAGCAAGA CGCCAACC GAGA GGTTGGCG TTCTGCTTTCGGGCC Lcho_1308 1393306 - 1393950 + | fibronectin type III domain-containing protein TERM 735 1394085 - 1394038 - f 71 -12.1 -3.20348 | gap 3, overlap 1394031 CCCACGAACAGCCAA TCGGCTTGGCCGCGTTGACACGCG ACG CGCGTG-CG-C-CGGCCAAGCCCA GGGAGTGACATGAAC Lcho_1309 1394095 - 1396569 + | EcoEI R domain-containing protein TERM 736 1397411 - 1397360 - g 73 -13.6 -3.40403 | gap 1 GGTGCGCCACGACAA CACGCTGGCCCGGCCG-CTGCGC GACTACG GCGCGGCCGACCGGGTCGACGTG GTGCTGACCAATCCG Lcho_1310 1396599 - 1398068 + | N-6 DNA methylase Lcho_1311 1398065 - 1399801 + | restriction modification system DNA specificity subunit Lcho_1312 1399805 - 1399948 + | hypothetical protein Lcho_1313 1399986 - 1401200 + | hypothetical protein Lcho_1314 1401211 - 1402113 + | hypothetical protein Lcho_1316 1403144 - 1404106 + | hypothetical protein Lcho_1317 1405151 - 1404117 - | LysR family transcriptional regulator Lcho_1318 1405169 - 1406260 + | O-methyltransferase family protein Lcho_1319 1406738 - 1406250 - | hypothetical protein Lcho_1321 1408616 - 1407339 - | gluconate 2-dehydrogenase (acceptor) Lcho_1320 1406803 - 1407462 + | hypothetical protein Lcho_1322 1409332 - 1408613 - | putative cytochrome c TERM 737 1409606 - 1409634 + G 76 -3 -4.72272 | gap 2, overlap 1409602 1409587 1409586 CGGCCTACTTGGCGG CGCACGTGCTGCTG TGT CTGCTGC-CG-GCG TTTTTCATCGCCGGG TERM 738 1410801 - 1410838 + G 71 -14.7 -3.05343 | CGCCGCCGTGATCGG CCGGCGCCAGACCGTCG CCTA CGTCGGCCTGGTGGCGG TCTTCAGCATCTGCG Lcho_1323 1409545 - 1410903 + | permease Lcho_1324 1410927 - 1411163 + | redox-active disulfide protein 2 Lcho_1325 1411230 - 1411595 + | LrgA family protein Lcho_1326 1411588 - 1412304 + | LrgB family protein Lcho_1327 1412327 - 1413292 + | FliA/WhiG family RNA polymerase sigma 28 subunit Lcho_1328 1414025 - 1413321 - | hypothetical protein Lcho_1329 1414558 - 1414028 - | hypothetical protein Lcho_1330 1416444 - 1414534 - | peptidase S8 and S53 subtilisin kexin sedolisin TERM 739 1415801 - 1415777 - G 72 -11.4 -3.58343 | gap 1, opp_overlap 1415777 CCGATCATGTCGAAA CCGGC-CACCC GATT GGGCGAGCCGG TGATGTCGGGGTGCG Lcho_1331 1417836 - 1416511 - | TRAP C4-dicarboxylate transport system permease DctM subunit Lcho_1332 1418330 - 1417833 - | hypothetical protein TERM 740 1418100 - 1418042 - G 75 -16.7 -2.62616 | overlap 1418030 GCAGCGCGCACATCA GCGCCAGCAGCAGCGCGCCGATGC-CG TCGAGCG CGCGCA-CGCCACGCTGCGGCAGGCGC TGGGTGAAGAAGTCG TERM 741 1418385 - 1418363 - R 100 -20.6 -2.78816 | TGATGGCCCACGAGA CGACGCGCCC GGA GGGCGCGTCG AGACGGGCTCAGGCA TERM 742 1418397 - 1418428 + r 74 -15 -2.54371 | overlap 1418388 GTCGAGACGGGCTCA GGCAGGGCCGCGGC TCAG GCCGCGGCCGGGTC TCACTTGCGGTACTT Lcho_1333 1419460 - 1418429 - | TRAP dicarboxylate transporter- DctP subunit Lcho_1334 1420536 - 1419568 - | phthalate 4,5-dioxygenase TERM 743 1420453 - 1420432 - G 80 -11.5 -4.07568 | CGCGCCGGCCGAAAA CGCCGGCAG CGCG CTGCCGTCG TCGGCCACCAGCTCG Lcho_1335 1421588 - 1420533 - | Rieske (2Fe-2S) domain-containing protein Lcho_1336 1421662 - 1422402 + | GntR family transcriptional regulator TERM 744 1422629 - 1422601 - f 93 -5.8 -5.3798 | opp_overlap 1422601 1422616, overlap 1422604 GAACAAGAAGAAAAA CGAGTGCCGCGC TTGTT GCGCAGCGCCTG CGAAGTTCCTCGACC TERM 745 1422835 - 1422817 - g 79 -13.2 -3.78934 | overlap 1422820 1422823 CTCGGTCGACAAGAA GAAGGACG GTC CGTCCTTC AAGGAAGTGGCCGGC TERM 746 1422832 - 1422820 - g 71 -9.1 -4.02817 | overlap 1422817 1422823 GGTCGACAAGAAGAA GGACG GTC CGTCC TTCAAGGAAGTGGCC Lcho_1337 1422659 - 1423009 + | cytochrome c class I Lcho_1338 1423044 - 1423652 + | NapC/NirT cytochrome c domain-containing protein TERM 747 1423685 - 1423710 + T 70 -11.7 -3.37879 | CTGGATGCTGCCGAC GCGGCCGAGGC CGCT GCCACGGCGGC TTCGTTGGGGTTGAT Lcho_1339 1424364 - 1423663 - | NapC/NirT cytochrome c domain-containing protein Lcho_1340 1424871 - 1424386 - | nitrate reductase cytochrome c-type subunit (NapB) Lcho_1341 1425716 - 1424871 - | NapH/MauN family ferredoxin-type protein Lcho_1342 1426432 - 1425713 - | MauM/NapG family ferredoxin-type protein Lcho_1343 1429007 - 1426452 - | periplasmic nitrate reductase, large subunit Lcho_1344 1429506 - 1429171 - | hypothetical protein TERM 748 1431146 - 1431108 - g 73 -13.9 -3.2981 | GACATCAACCAGGAA CGCCACCACGCCTTTGC CGGCT ACGAAGGCATGGTGACG ATGATCGCGGAGATC Lcho_1345 1429833 - 1431284 + | nitrogenase MoFe cofactor biosynthesis protein NifE Lcho_1346 1433984 - 1431288 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Lcho_1347 1434485 - 1434024 - | hydrogenase maturation protease Lcho_1348 1436023 - 1434494 - | nickel-dependent hydrogenase large subunit Lcho_1349 1436987 - 1436046 - | NADH ubiquinone oxidoreductase 20 kDa subunit TERM 749 1437126 - 1437148 + H 74 -4.9 -4.52589 | overlap 1437130 GGTGCCCATGCTTTG CAGCCCAC-CG GTC CGAGTGG-CTG TTTTGTGTCAAACCA TERM 750 1438252 - 1438270 + G 72 -3 -4.57073 | overlap 1438250 TGCCGAGCCCGATCT GCTGTGGG CCA TCGGCAGC TTTTTGACCGAGATG Lcho_1350 1437293 - 1438666 + | nitrogenase molybdenum-iron cofactor biosynthesis protein NifN Lcho_1351 1438701 - 1439132 + | nitrogen fixation protein NifX Lcho_1352 1439129 - 1439608 + | nitrogen fixation protein Lcho_1353 1439629 - 1439829 + | hypothetical protein Lcho_1354 1439849 - 1440157 + | ferredoxin III, nif-specific Lcho_1355 1440169 - 1440843 + | NifQ family protein Lcho_1356 1440897 - 1441658 + | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 751 1441890 - 1441928 + G 70 -13.1 -3.37091 | opp_overlap 1441900, overlap 1441883 CCGCAAGGCTGGGTC GGCCAGACCACCGAGGC ACTCG GCCTGGGTCGTCTGCCC TTCAGTTTTGCGGGT Lcho_1357 1441662 - 1442360 + | molybdate ABC transporter, inner membrane subunit Lcho_1358 1442344 - 1443468 + | molybdate ABC transporter, ATPase subunit Lcho_1359 1443713 - 1443471 - | hypothetical protein TERM 752 1443942 - 1443927 - H 70 -5.4 -4.37092 | overlap 1443928 AGGGTTGCGACAAAA CCGACA GCCT TGTCGA CACCTTCACCACGCG TERM 753 1443997 - 1444010 + H 70 -8.1 -4.05067 | opp_overlap 1443988 TGAAATGCGCCAAGT GCCTG ATCG CAGGC TGTTTTTCTGCACTG Lcho_1360 1444099 - 1445325 + | cysteine desulfurase IscS TERM 754 1445758 - 1445727 - g 70 -13.6 -3.18735 | overlap 1445728 CGAAGACGCGATCAA GGCGGCGGTGGCCG ACTA CCGCCACCGCCACG ACGCCCACATCGAGC TERM 755 1445757 - 1445728 - g 74 -17.1 -2.5092 | overlap 1445727 GAAGACGCGATCAAG GCGGCGGTGGCCG ACTA CCGCCACCGCCAC GACGCCCACATCGAG Lcho_1361 1445380 - 1445808 + | FeS cluster assembly scaffold IscU Lcho_1362 1445860 - 1446279 + | iron-sulfur cluster assembly accessory protein Lcho_1363 1446293 - 1446616 + | iron-sulfur cluster assembly accessory protein TERM 756 1447674 - 1447692 + G 87 -6.6 -5.00616 | overlap 1447676 CCCGCATGCTGCACG TGCGCCGC GCG GTGGCGGA TTTTTTCGGCCGCGA Lcho_1364 1446635 - 1448545 + | Fe-S protein assembly chaperone HscA Lcho_1365 1448578 - 1448961 + | ferredoxin, 2Fe-2S type, ISC system TERM 757 1448984 - 1449013 + F 85 -16.5 -3.14132 | opp_overlap 1448987 1448990, overlap 1448987 1448990 AGTCGCGTTGCGCAA CCAGAAGACGGCC TGCG GGCCGTCTTCTGC TTGGTGGCGCCGGGC TERM 758 1448987 - 1449010 + F 81 -16.8 -2.77899 | opp_overlap 1448987 1448990, overlap 1448984 1448990 CGCGTTGCGCAACCA GAAGACGGCC TGCG GGCCGTCTTC TGCTTGGTGGCGCCG TERM 759 1449010 - 1448987 - f 81 -16.8 -2.70932 | opp_overlap 1448987 1448984 1448990, overlap 1448990 CGCGTTGCGCAACCA GAAGACGGCC TGCG GGCCGTCTTC TGCTTGGTGGCGCCG TERM 760 1449007 - 1448990 - f 78 -12.7 -3.50853 | opp_overlap 1448990 1448987 1448984, overlap 1448987 GTTGCGCAACCAGAA GACGGCC TGCG GGCCGTC TTCTGCTTGGTGGCG TERM 761 1448990 - 1449007 + F 78 -12.7 -3.54029 | opp_overlap 1448987 1448990, overlap 1448987 1448984 GTTGCGCAACCAGAA GACGGCC TGCG GGCCGTC TTCTGCTTGGTGGCG TERM 762 1449122 - 1449105 - f 79 -4.1 -4.87133 | opp_overlap 1449100 1449093 1449083, overlap 1449100 ACGTTGGAAACAAAA GTCTTTG TTTT CAATGAC TTGGCGTGTTCATGT Lcho_1366 1449189 - 1450343 + | homocitrate synthase Lcho_1367 1450385 - 1450750 + | nitrogen fixation protein NifW Lcho_1368 1450797 - 1451648 + | electron transfer flavoprotein alpha/beta-subunit TERM 763 1451725 - 1451695 - g 76 -11.8 -3.73068 | GGCCGAATCCAACAA GCCTGCGATGGC CAACGCC GCCGCCGCAGGC GCCGCAAAGACAGCG Lcho_1369 1451678 - 1452802 + | electron transfer flavoprotein alpha/beta-subunit Lcho_1370 1452821 - 1454125 + | electron-transferring-flavoprotein dehydrogenase Lcho_1371 1454122 - 1454418 + | putative ferredoxin like protein; FixX Lcho_1372 1454682 - 1456463 + | transcriptional regulator NifA Lcho_1373 1456593 - 1457390 + | two component transcriptional regulator TERM 764 1457634 - 1457648 + G 75 -5.6 -4.56775 | overlap 1457628 CCCTGAATCGGCGAC CTGGCG GGT CGACAG TTTTTCGACCCGCGT Lcho_1374 1457425 - 1458228 + | LuxR family transcriptional regulator Lcho_1375 1458888 - 1458232 - | putative insertion element IS1016 transposase Lcho_1376 1459090 - 1460487 + | lipopolysaccharide biosynthesis protein Lcho_1377 1460509 - 1461411 + | exopolysaccharide tyrosine-protein kinase TERM 765 1461417 - 1461435 + F 90 -16 -3.45571 | overlap 1461411 CGCCCCGTGAGGGCA GGCGGTCG CCT CGACCGCC TTCATATTTGCAAGC TERM 766 1461719 - 1461736 + F 71 -4.1 -4.57073 | overlap 1461720 ATGCGATCACTTGCC GTGATCC GACC GGATCAA TTTTTCAGACAAGTG Lcho_1378 1461883 - 1463175 + | fibronectin type III domain-containing protein Lcho_1379 1463222 - 1464553 + | hypothetical protein Lcho_1380 1465315 - 1464518 - | hypothetical protein Lcho_1381 1466309 - 1465329 - | glycosyl transferase family protein Lcho_1382 1467277 - 1466327 - | glycosyl transferase family protein Lcho_1383 1468313 - 1467294 - | glycosyl transferase family protein Lcho_1384 1469644 - 1468310 - | hypothetical protein Lcho_1385 1470771 - 1469641 - | UDP-N-acetylglucosamine 2-epimerase Lcho_1386 1471976 - 1470768 - | hypothetical protein TERM 767 1471792 - 1471803 + g 74 -7.2 -4.23999 | overlap 1471770 1471776 AGCAGCGCATCGGGG CCGC TGTC GCGG TTGTTTTCGCTGTCC Lcho_1387 1472676 - 1472005 - | methyltransferase type 11 TERM 768 1472619 - 1472564 - G 93 -19.6 -3.53012 | gap 1, overlap 1472565 TGGCGGCGGTCGAAA TCCGCCACCT-CCGGCGGGTCGCCGAG CTG CGCCACGACGCGCCGGCAGGCGGCGGC AACGCCGTCATCGCG TERM 769 1472618 - 1472565 - G 93 -23.1 -2.71712 | gap 1, overlap 1472564 GGCGGCGGTCGAAAT CCGCCACCT-CCGGCGGGTCGCCGAG CTG CGCCACGACGCGCCGGCAGGCGGCGG CAACGCCGTCATCGC Lcho_1388 1473647 - 1472673 - | glycosyl transferase family protein TERM 770 1472853 - 1472816 - G 72 -12.5 -3.4529 | overlap 1472786 AGATCAGCAGCAGAA CGCCGACCCGCAAGGCG CTGG CGCCGAACAGGGCGGCG CGGTAGAGCATGGCG Lcho_1389 1475536 - 1473659 - | asparagine synthase (glutamine-hydrolyzing) Lcho_1390 1476419 - 1475511 - | glycosyl transferase family protein Lcho_1391 1477501 - 1476416 - | hypothetical protein Lcho_1392 1480084 - 1477502 - | hypothetical protein Lcho_1393 1481278 - 1480100 - | glutamine--scyllo-inositol transaminase Lcho_1394 1482252 - 1481275 - | NAD-dependent epimerase/dehydratase Lcho_1395 1483494 - 1482283 - | undecaprenyl-phosphate galactose phosphotransferase TERM 771 1483252 - 1483278 + g 74 -4.3 -4.59773 | gap 1, opp_overlap 1483239, overlap 1483249 1483253 CAGCGCCAGCGACAG CGCCGCCCGCGA GCGT TCG-GCGCGGCA TTTTTCCCGGTGCAG Lcho_1396 1483684 - 1484163 + | acetyltransferase Lcho_1397 1484182 - 1485240 + | oxidoreductase domain-containing protein TERM 772 1485448 - 1485409 - gT 75 -13.7 -3.02144 | gap 2 GCATCGGCGTCAACA CCGGCA-CCAGC-GCGC TGCATCTG GCGCTGCTGGCTGCCGG CGTCGGCGCGGGTGA Lcho_1399 1487406 - 1486354 - | hypothetical protein Lcho_1398 1485237 - 1486499 + | glutamine--scyllo-inositol transaminase TERM 773 1487368 - 1487353 - Gf 75 -10.4 -3.86015 | opp_overlap 1487350 1487337 1487353 CAGCGCGTCGAGAAA CGCGCA CACC TGCGCG TCGTTCTCGGGCGAC Lcho_1400 1487765 - 1488382 + | two component LuxR family transcriptional regulator Lcho_1401 1488505 - 1489659 + | response regulator receiver sensor signal transduction histidine kinase Lcho_1402 1489656 - 1490291 + | two component LuxR family transcriptional regulator Lcho_1403 1491091 - 1490276 - | hypothetical protein Lcho_1404 1491299 - 1492888 + | nitrogenase cofactor biosynthesis protein NifB Lcho_1405 1492933 - 1493127 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Lcho_1406 1493136 - 1493540 + | iron-sulfur cluster assembly accessory protein Lcho_1407 1493565 - 1494215 + | hypothetical protein Lcho_1408 1494215 - 1495027 + | LRV FeS4 cluster domain-containing protein Lcho_1409 1495041 - 1495376 + | NifZ family protein Lcho_1410 1495392 - 1495670 + | NifZ protein, putative Lcho_1411 1495673 - 1496089 + | hypothetical protein Lcho_1412 1496086 - 1497261 + | aminotransferase class V Lcho_1413 1497306 - 1497524 + | nitrogen fixation protein FixT TERM 774 1497776 - 1497799 + G 72 -11.6 -3.71848 | TGCTGGCAGGTGACT GCCGATGGCC GCCA GGCCGCCGGC TTCTTCGTCGCCGGA Lcho_1414 1497536 - 1497823 + | hypothetical protein Lcho_1415 1497828 - 1499033 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 775 1499635 - 1499670 + G 79 -5.3 -4.70583 | gap 2 CATCCAGACGCCGAT CCCCGCGCTGGTGCAGG AGCG CC-GCGCC-GAGCTGGG TTTTGTCTTCCTCGG TERM 776 1499781 - 1499796 + G 76 -7.5 -4.36914 | opp_overlap 1499781 TGGCCGATGAACCGA CGCGC ATGGAA GCGCG TTTTCTCGAAGAGCA Lcho_1416 1499045 - 1499887 + | hypothetical protein Lcho_1417 1499933 - 1500238 + | ferredoxin Lcho_1418 1500294 - 1501484 + | amine oxidase Lcho_1419 1501494 - 1501850 + | hypothetical protein Lcho_1420 1501989 - 1502861 + | hypothetical protein Lcho_1421 1503447 - 1502863 - | putative phosphohistidine phosphatase, SixA Lcho_1422 1503794 - 1503483 - | hypothetical protein Lcho_1423 1504300 - 1503881 - | immunoglobulin I-set domain-containing protein TERM 777 1504103 - 1504154 + g 73 -13.7 -3.30159 | gap 2 GCTGAACCTGGCGCT GCCGCCGCTGACCACGG-T-GGCCG GTTG CGGCTGGGCCGTGATCGCCGGCGGC TTCTGCGCGGCTTCG Lcho_1424 1504573 - 1506354 + | hypothetical protein TERM 778 1507605 - 1507618 + G 74 -9.5 -4.03234 | AAGCCTTTTCGACCG GGCCG ATCG CGGCC TTTATCTCGCCAAGC Lcho_1425 1506535 - 1507680 + | diguanylate cyclase Lcho_1426 1508096 - 1507800 - | hypothetical protein Lcho_1427 1508394 - 1508152 - | FmdB family regulatory protein Lcho_1428 1509140 - 1508550 - | hypothetical protein TERM 779 1508952 - 1508910 - G 76 -15.7 -3.22223 | gap 1, opp_overlap 1508922 1508936 1508947 GAAGCTGAGCAGGAA CG-CGCTCAGGAAGGCGA TGTGCGAT TCGCCTTCCTGCGCGGCG GCAATCACCTGGTCG TERM 780 1509075 - 1509039 - G 70 -10 -3.81287 | opp_overlap 1509035, overlap 1509031 GATATCACCACGAAA GCCGATGCGTCCGGCC TTCCG GGTCGGACCCTTCAGC ACGCTGTTGAGCAGG Lcho_1429 1509326 - 1509189 - | hypothetical protein TERM 781 1510099 - 1510050 - g 71 -7 -4.25104 | gap 1, opp_overlap 1510050 1510065 CTTCCTCGAGGAAAA CGGCGCCTATGACGGCGT-GGAC TACGT GTCCTACGACGTGCTCGGCGACG TGGTGTGCGGTGGTT Lcho_1430 1509709 - 1510590 + | nitrogenase iron protein TERM 782 1510619 - 1510603 - f 84 -12.3 -4.00868 | TGATCCAGAACCAAA GGCTCAC CGA GTGAGCC ATGGACGGCGGTGTG Lcho_1431 1510701 - 1512158 + | nitrogenase molybdenum-iron protein alpha chain Lcho_1432 1512287 - 1513846 + | nitrogenase molybdenum-iron protein beta chain TERM 783 1514178 - 1514220 + G 71 -14.9 -3.05384 | gap 2 GTTGACGATGCCCGA GGCGTCGGTGGCGCAGGCCGC CTT GCGGCGTGC-CCAC-GACACC TTCGATGGCAGCGCC Lcho_1433 1513984 - 1514301 + | hypothetical protein TERM 784 1514638 - 1514685 + G 73 -11.1 -3.85698 | gap 1, overlap 1514639 GCAGCCGGTGCGCCT GGTCGACGCCTGCCGCGC-GGC CTTGC GCCAGCGCGGCGGGCAATGGCG TTTCTACGAAGGCGA TERM 785 1514639 - 1514684 + G 70 -14.6 -2.91276 | gap 1, overlap 1514638 CAGCCGGTGCGCCTG GTCGACGCCTGCCGCGC-GGC CTTGC GCCAGCGCGGCGGGCAATGGC GTTTCTACGAAGGCG Lcho_1434 1514339 - 1514824 + | hypothetical protein Lcho_1435 1514852 - 1515370 + | co-chaperone Hsc20 Lcho_1436 1516226 - 1515381 - | IclR family transcriptional regulator Lcho_1437 1516388 - 1517203 + | shikimate dehydrogenase substrate binding subunit Lcho_1438 1517253 - 1518269 + | TRAP dicarboxylate transporter, DctP subunit Lcho_1439 1519168 - 1518314 - | NmrA family protein Lcho_1441 1520466 - 1519615 - | uroporphyrin-III C-methyltransferase Lcho_1440 1519257 - 1519697 + | HxlR family transcriptional regulator Lcho_1442 1520708 - 1522429 + | hydroxylamine reductase TERM 786 1522499 - 1522468 - f 83 -17.4 -2.54166 | opp_overlap 1522473, overlap 1522473 CGCGCAATCAAAAGG CAAAAGGCGAGCCC GCGA GGGCTCGCCTTTTT TTGACGTCGCTCGCG TERM 787 1522494 - 1522473 - f 100 -17.3 -4.4518 | opp_overlap 1522473, overlap 1522468 AATCAAAAGGCAAAA GGCGAGCCC GCGA GGGCTCGCC TTTTTTTGACGTCGC TERM 788 1522473 - 1522494 + F 100 -17.3 -5.44119 | opp_overlap 1522473 1522468 AATCAAAAGGCAAAA GGCGAGCCC GCGA GGGCTCGCC TTTTTTTGACGTCGC Lcho_1443 1522637 - 1522966 + | hypothetical protein Lcho_1444 1522963 - 1524156 + | cytochrome d1 heme region Lcho_1445 1524171 - 1525187 + | AsnC family transcriptional regulator Lcho_1446 1525174 - 1525665 + | AsnC family transcriptional regulator TERM 789 1526068 - 1526029 - g 87 -20 -3.04792 | gap 1, opp_overlap 1526066 CCACGAGGTCGAACA GCAGGCCGCGCAGATC-GC CAC GCTGCTCGGCGCGGCCTGC CGTGGCCACGACATC Lcho_1447 1525655 - 1526137 + | AsnC family transcriptional regulator Lcho_1448 1526145 - 1527401 + | radical SAM domain-containing protein Lcho_1449 1527582 - 1530419 + | PAS/PAC sensor hybrid histidine kinase TERM 790 1531644 - 1531626 - g 82 -4.5 -4.79223 | gap 1, overlap 1531590 1531627 1531630 CGACACGAGCAAAAA GCGA-CGG CACG CCGACCGC GCAGGTCGTCAACCT Lcho_1450 1530590 - 1532167 + | cytochrome d1 heme region Lcho_1451 1533342 - 1532188 - | hypothetical protein TERM 791 1532904 - 1532854 - G 83 -17 -3.28924 | gap 3 CAGGGTGGGCGAGAA CACCGCGGTCCGCGTGGCGCC-GTC GAGC GACAGGCG-CA-GCAGGCCGCGGTG CAGCGCGTCCTGATC Lcho_1452 1534490 - 1533339 - | TPR repeat-containing protein TERM 792 1533690 - 1533732 + g 71 -8.3 -4.07568 | gap 1 CATCGGCAGCTCGAG CGCCGACTCCGCCTCGGC CAGTCGCA GCAGCAGCGG-GTCGGCG TTTTCCCAGCCGGCG Lcho_1453 1534573 - 1534791 + | hypothetical protein TERM 793 1534820 - 1534834 + T 100 -12.8 -4.66537 | opp_overlap 1534792 1534820 1534822 ACCACACGAAACAAA GCGGGC CTG GCCCGC TTTTCTGTTCGGGCC TERM 794 1534834 - 1534820 - T 100 -12.8 -4.54205 | opp_overlap 1534820, overlap 1534792 1534822 ACCACACGAAACAAA GCGGGC CTG GCCCGC TTTTCTGTTCGGGCC Lcho_1454 1535614 - 1534856 - | Crp/FNR family transcriptional regulator Lcho_1455 1536382 - 1535705 - | hypothetical protein Lcho_1456 1536759 - 1536379 - | lipoprotein Lcho_1457 1537433 - 1536756 - | curli production assembly/transport component CsgG TERM 795 1537502 - 1537480 - R 100 -17 -4.41047 | opp_overlap 1537476 ATCTTCGAACGAAAA CAAGCGGCCC GTG GGGCCGCTCG TCAATGTATCGCGCG Lcho_1458 1537983 - 1537528 - | hydrogenase maturation protease Lcho_1459 1539518 - 1538004 - | nickel-dependent hydrogenase large subunit Lcho_1460 1540236 - 1539661 - | NADH ubiquinone oxidoreductase 20 kDa subunit Lcho_1461 1540937 - 1540233 - | ferredoxin TERM 796 1540603 - 1540630 + g 85 -4.1 -5.00616 | gap 1, overlap 1540602 1540601 ATGTGCATCTGGTAG GCGGTGGCCTGC AGCAG GCAG-TTGCCGC TTTTTTCGCACGACG Lcho_1462 1542817 - 1540934 - | respiratory-chain NADH dehydrogenase domain-containing protein TERM 797 1541682 - 1541695 + g 70 -9.5 -3.75153 | TAGGGCGGGCGGATG CGCGG CGTG CCGCG TTTGCCTTCCAGCGA Lcho_1463 1542933 - 1544027 + | response regulator receiver modulated metal dependent phosphohydrolase Lcho_1464 1544049 - 1547456 + | multi-sensor hybrid histidine kinase Lcho_1465 1549328 - 1547472 - | von Willebrand factor type A TERM 798 1547641 - 1547607 - G 70 -12.9 -3.35996 | opp_overlap 1547638 GATCGTGACGCAGAA CGGCACCAGGCCG-GCG TCG CGCGCGGCCTG-CACCG CGTGGCGGGTGTCCT Lcho_1466 1550362 - 1549328 - | iron-sulfur cluster-binding protein TERM 799 1550324 - 1550309 - G 74 -4.6 -4.59773 | opp_overlap 1550314, overlap 1550310 1550313 CCCGACTTGGAAAAA GCGACG GCGG CGTTGC CGGGCGCCAGCCTTT Lcho_1467 1551287 - 1550454 - | ATPase Lcho_1468 1552771 - 1551320 - | cytochrome c oxidase subunit I Lcho_1469 1553217 - 1552783 - | putative nitric-oxide reductase subunit C TERM 800 1553248 - 1553264 + H 100 -2.1 -5.63103 | TCGTGGTGTGCATAG CCTAGGG ATT CACTCGG TTTTTTTCCTTGAAC Lcho_1470 1553389 - 1554399 + | peptidase U32 Lcho_1471 1554445 - 1555398 + | peptidase U32 Lcho_1472 1555395 - 1555862 + | sterol-binding domain-containing protein Lcho_1473 1557058 - 1555886 - | CBS domain-containing protein TERM 801 1556963 - 1556914 - G 75 -17.1 -2.62263 | gap 1 AGGCGTGCGACAGCA GCGCCACCATCACGATGCCCAGCG CGC CGCCGGCCACCACG-CGGCGGCGC TCGCGGCCGTCGATG Lcho_1474 1557224 - 1557493 + | hypothetical protein Lcho_1475 1557509 - 1558708 + | NnrS family protein TERM 802 1559100 - 1559075 - g 71 -6.7 -4.18018 | overlap 1559076 GGCCTTCATGGAAAA GCTCGACGCGC GCAC GCTCGCCGAGG TGCTGCCGCCGCCGC Lcho_1476 1558716 - 1559213 + | BadM/Rrf2 family transcriptional regulator TERM 803 1559362 - 1559404 + G 79 -17.6 -3.12351 | overlap 1559396 GCAGCTGGTGTTCTA CGGCGGCGCGTGGCTGCAGT GGA ACGGCCGCCAGGCGCTGCTG TTCGATCTGGGCGAG TERM 804 1560179 - 1560169 - g 76 -8.2 -4.1899 | CTACGCCACCGAAAA CGGC GTG GCCG GCCAGTGGAACCGCG Lcho_1477 1559210 - 1560655 + | cytochrome c oxidase accessory protein CcoG Lcho_1478 1561258 - 1560683 - | NosL family protein Lcho_1479 1562070 - 1561255 - | ABC-2 type transporter TERM 805 1562031 - 1561975 - G 86 -18.5 -3.38272 | opp_overlap 1561974, overlap 1561977 GATCACGAGCGAGAA CACCGCGAACACCAGCGCCACCGCGAG CAC CCAGCGGTTGCGCAGGCGGTCGCGGAA CTCCTTGGCCGCGAG TERM 806 1562029 - 1561977 - G 100 -23.3 -3.25896 | opp_overlap 1561974, overlap 1561975 TCACGAGCGAGAACA CCGCGAACACCAGCGCCACCGCGAG CAC CCAGCGGTTGCGCAGGCGGTCGCGG AACTCCTTGGCCGCG Lcho_1480 1563086 - 1562070 - | ABC transporter-related protein Lcho_1481 1564278 - 1563076 - | periplasmic copper-binding Lcho_1482 1567028 - 1564368 - | FMN-binding domain-containing protein Lcho_1483 1569012 - 1567078 - | nitrous-oxide reductase TERM 807 1568193 - 1568145 - G 75 -15.4 -3.39784 | gap 2, opp_overlap 1568143 1568142 1568187, overlap 1568143 CCACGTTGAAGAACA GGCAGGCGTCACGCTCGACCGACA TCA TGTCGG-CGAACTTCACGCC-GCC CTCGGTGTTGTACTG TERM 808 1568841 - 1568892 + g 71 -8.4 -4.05446 | gap 1, overlap 1568842 CGCCGGCGCTGCCGT GCGCGACC-GCTGCGGCCGAGGCGG GTG CCGCAGCGCCCGCGGCCGGTGCCGA TTTGTCGTTGCACGC TERM 809 1569607 - 1569567 - g 75 -14.6 -3.41051 | gap 1, opp_overlap 1569580, overlap 1569568 CTACCGCGACGACAA CCCGGTGGCGGCGCTGCAG GCGG CGGCCG-GCCGCCACCCGG TGGTGCTGCCGCCGG Lcho_1484 1569259 - 1570368 + | ApbE family lipoprotein TERM 810 1571040 - 1571051 + G 93 -7.2 -5.1675 | overlap 1571035 GCGCTGGCGGGGCAT CGGC TGAC GCCG TTTTTTCATCCATCG Lcho_1485 1570365 - 1571669 + | NnrS family protein TERM 811 1571886 - 1571843 - g 70 -13.8 -3.22298 | overlap 1571844 CTCATCGACGACCAA GGCGTGCAGGTGACGCTGAT CCCG ACCAGCGCCACCTGCCCGAT GGCCGACGTGATCCT TERM 812 1571885 - 1571844 - g 74 -17.3 -2.53164 | overlap 1571843 TCATCGACGACCAAG GCGTGCAGGTGACGCTGAT CCCG ACCAGCGCCACCTGCCCGA TGGCCGACGTGATCC Lcho_1486 1571714 - 1572031 + | hypothetical protein Lcho_1487 1572049 - 1573170 + | hypothetical protein TERM 813 1573194 - 1573176 - T 100 -13.1 -5.14563 | TCGCGCATGAAAAAA GCCCCGC GTGGT GCGGGGC TTCGAGCGCGGTTCG Lcho_1488 1573536 - 1573231 - | cytochrome c class I Lcho_1489 1573707 - 1573970 + | hypothetical protein Lcho_1490 1575674 - 1573992 - | dihydroxy-acid dehydratase TERM 814 1574585 - 1574619 + g 82 -12.8 -4.07885 | CCGCGCGGATCACGT CCTGGTCGGCGCGC AGGTCGG GCACGTCGGCCAGG TTTTCAGCCACGGTC TERM 815 1576021 - 1576065 + G 79 -16.4 -3.29947 | GAGCTGCCGCGCATC GCCCAGGCCGCGGC-GGCCGGC CTG GCCGGGCAGCTGCG-CCTGGCC TTCATCTCGTCGATC Lcho_1491 1575775 - 1576701 + | LysR family transcriptional regulator TERM 816 1576750 - 1576772 + G 74 -4.1 -4.59773 | gap 1, overlap 1576751 1576751 TGCATCCCCAGTTCA ACCC-GATCG CGCT CGATCTGGGC TTTTTCCAGATCCAC Lcho_1492 1576728 - 1577561 + | prolipoprotein diacylglyceryl transferase Lcho_1493 1577572 - 1578645 + | glycoprotease family metalloendopeptidase TERM 817 1579069 - 1579095 + G 70 -13.6 -3.17212 | opp_overlap 1579068 1579065 1579062 1579069 CTCAACAAGCACAAC CAGCGCGAGCCG CAG CGCCGCGCGCTG TTGCTCAACTACTCG Lcho_1494 1578694 - 1579974 + | putative transporter signal peptide protein Lcho_1495 1580010 - 1581176 + | aminotransferase class I and II Lcho_1496 1581315 - 1581578 + | ribosomal protein S15 TERM 818 1581640 - 1581582 - f 100 -20 -2.84098 | gap 3, opp_overlap 1581593 1581597, overlap 1581597 CTGCGCAAGTAATCA CCGCATGCATGCAAAGAGCCTGT-CTGGA CCTC TCCAGCACAGGCTCTTTG--TGCTTGCGG ATCGTCATCGATATC TERM 819 1581593 - 1581631 + F 93 -19.9 -2.72661 | gap 1, opp_overlap 1581582 1581597, overlap 1581597 ATCACCGCATGCATG CAAAGAGCCTGT-CTGGA CCTC TCCAGCACAGGCTCTTTG TGCTTGCGGATCGTC TERM 820 1581597 - 1581627 + F 95 -14.9 -4.05714 | gap 1, opp_overlap 1581582 1581597, overlap 1581593 CCGCATGCATGCAAA GAGCCTGT-CTGGA CCTC TCCAGCACAGGCTC TTTGTGCTTGCGGAT TERM 821 1581627 - 1581597 - f 87 -14.9 -3.6682 | gap 1, opp_overlap 1581597 1581593, overlap 1581582 CCGCATGCATGCAAA GAGCCTGT-CTGGA CCTC TCCAGCACAGGCTC TTTGTGCTTGCGGAT Lcho_1497 1581802 - 1584105 + | polyribonucleotide nucleotidyltransferase Lcho_1498 1584118 - 1585104 + | PIG3 family NAD(P)H quinone oxidoreductase Lcho_1499 1585147 - 1585893 + | Triose-phosphate isomerase Lcho_1500 1585929 - 1586330 + | preprotein translocase, SecG subunit TERM 822 1586891 - 1586903 + G 81 -9.1 -4.56607 | overlap 1586887 GGGTTGGCGTGGCAC CCCAG GTG CTGGG TTTTCTGCTTGGTCC Lcho_1501 1586824 - 1587183 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 Lcho_1502 1587208 - 1587684 + | NADH-quinone oxidoreductase, B subunit Lcho_1503 1587698 - 1588297 + | NADH (or F420H2) dehydrogenase, subunit C Lcho_1504 1588316 - 1589569 + | NADH dehydrogenase I, D subunit Lcho_1505 1589578 - 1590105 + | NADH-quinone oxidoreductase, E subunit Lcho_1506 1590110 - 1591468 + | NADH-quinone oxidoreductase, F subunit Lcho_1507 1591487 - 1593799 + | NADH-quinone oxidoreductase, chain G Lcho_1508 1593814 - 1594872 + | NADH dehydrogenase (quinone) Lcho_1509 1594903 - 1595400 + | NADH-quinone oxidoreductase, chain I Lcho_1510 1595475 - 1596125 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Lcho_1511 1596125 - 1596430 + | NADH-ubiquinone oxidoreductase chain 4L TERM 823 1598285 - 1598233 - g 78 -9 -4.45544 | gap 2, overlap 1598236 CTGGATCAACGAAAA CATCCTCGCCGCCGGAGCCCGCATGC TCG GC-CGCGGGCTCTGGAAGGGTGG-TG ACGTGGCGGTCATCG Lcho_1512 1596452 - 1598452 + | proton-translocating NADH-quinone oxidoreductase, chain L Lcho_1513 1598469 - 1599941 + | proton-translocating NADH-quinone oxidoreductase, chain M Lcho_1514 1599961 - 1601442 + | proton-translocating NADH-quinone oxidoreductase, chain N Lcho_1515 1601462 - 1602088 + | NUDIX hydrolase Lcho_1516 1602099 - 1602581 + | hypothetical protein Lcho_1517 1604031 - 1602613 - | FAD linked oxidase domain-containing protein Lcho_1518 1604402 - 1604028 - | putative transmembrane protein TERM 824 1604942 - 1604998 + G 71 -16.4 -2.66316 | gap 1, overlap 1604970 TGCTGACCATCGACC GCGCGCTCAACGCGATCTGGCGGGTGC GCCA GC-CGCGCCCGATCGCGCAGCGCGTGC TGGTGTACTGGGCCA Lcho_1519 1604515 - 1605789 + | ribonuclease BN TERM 825 1605882 - 1605894 + F 83 -6.2 -4.95155 | opp_overlap 1605876, overlap 1605881 1605880 1605885 CTTATCGAAGCCTTG CCGC GCCCG GCGG TTTTTATGCTGTGCG Lcho_1520 1605959 - 1607590 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 826 1607612 - 1607641 + T 72 -12.9 -3.1552 | gap 1, overlap 1607611 CGTCAGATCAGCGCG CGCCGCAAGGCCTG CAG CAGGCCTT-CGGGG TCTTCCTGCATCAGG Lcho_1521 1608462 - 1607599 - | alpha/beta hydrolase fold Lcho_1522 1609820 - 1608462 - | O-acetylhomoserine/O-acetylserine sulfhydrylase Lcho_1523 1609896 - 1610369 + | signal-transduction protein TERM 827 1610416 - 1610398 - T 100 -14.6 -4.72272 | opp_overlap 1610398 TGCGCCCATGAAAAA GGCACCTC GTC GAGGTGCC TTTTTTGTTGTGCGC TERM 828 1610398 - 1610416 + T 100 -14.6 -5.55769 | opp_overlap 1610398 TGCGCCCATGAAAAA GGCACCTC GTC GAGGTGCC TTTTTTGTTGTGCGC Lcho_1524 1611004 - 1610441 - | CheW protein Lcho_1525 1611259 - 1612416 + | chorismate synthase Lcho_1526 1613551 - 1612439 - | response regulator receiver modulated CheB methylesterase Lcho_1527 1614076 - 1613594 - | hypothetical protein Lcho_1528 1614890 - 1614090 - | MCP methyltransferase, CheR-type Lcho_1529 1615438 - 1614887 - | CheW protein Lcho_1530 1618132 - 1615460 - | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Lcho_1531 1621269 - 1618210 - | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Lcho_1532 1623920 - 1621359 - | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Lcho_1533 1626198 - 1623946 - | CheA signal transduction histidine kinase TERM 829 1625146 - 1625192 + g 78 -11.5 -3.90291 | opp_overlap 1625146, overlap 1625136 1625157 GCTGACCCGCAGGAA GCGGGTGTCGTCGCC-GCGCCGG TCC TTGGCGCCGGCG-CGCCGTTCGC TTTCCTTGCGCCGCT TERM 830 1625157 - 1625187 + g 79 -16 -3.33399 | opp_overlap 1625146, overlap 1625146 GGAAGCGGGTGTCGT CGCCGCGCCGGTCC TTG GCGCCGGCGCGCCG TTCGCTTTCCTTGCG Lcho_1534 1626527 - 1626195 - | anti-sigma-factor antagonist Lcho_1535 1626902 - 1626537 - | response regulator receiver protein Lcho_1536 1627276 - 1626908 - | response regulator receiver protein Lcho_1537 1628424 - 1627291 - | methyl-accepting chemotaxis sensory transducer Lcho_1538 1628769 - 1630010 + | methyl-accepting chemotaxis sensory transducer TERM 831 1630636 - 1630668 + G 70 -13.3 -3.40403 | overlap 1630638 TCGTGCTGACGATGC CGGTCGCGTCGGTCG GCC CGACCGGCGGTGCCG TTCTGCTCGGCACGC Lcho_1539 1630110 - 1632155 + | diguanylate cyclase with PAS/PAC sensor TERM 832 1632485 - 1632506 + F 74 -11.7 -3.60627 | overlap 1632479 CATTCTGCATCCGGT TATCGGGTT GAAT AACCCGATA TTTCCGCTGCAGTCC Lcho_1540 1632626 - 1633465 + | hypothetical protein Lcho_1541 1633530 - 1635500 + | cytochrome c family protein Lcho_1542 1635497 - 1637464 + | cytochrome C family protein Lcho_1543 1637565 - 1640069 + | sporulation domain-containing protein TERM 833 1640266 - 1640214 - g 91 -18.9 -3.28712 | GCTGCGCGCCGACAA CGGCCGCGGCAAGACCAGCCTGCTG CGC CTGCTGGCCGGCCTGGCGGCGCCCG AGTCCGGTGACGTGC Lcho_1544 1640047 - 1640751 + | heme exporter protein CcmA TERM 834 1640844 - 1640876 + G 73 -11.3 -3.75024 | gap 1, overlap 1640843 1640839 CTGCGCCTGGCCGCG CGCCGGCG-CAGCG AGGCGG CGCTGCCGCTGGTG TTCTTCATCGTCGCC TERM 835 1641285 - 1641315 + G 72 -6 -4.41633 | overlap 1641286 1641288 GGCATGCTGGTGTTC CTGCTGGTGCTGCC GCT GGCGGTGCCGGTAC TTATTTTTGGAACTG Lcho_1545 1640748 - 1641461 + | heme exporter protein CcmB Lcho_1546 1641673 - 1642416 + | heme exporter protein CcmC Lcho_1547 1642413 - 1642568 + | hypothetical protein Lcho_1548 1642653 - 1643114 + | CcmE/CycJ protein TERM 836 1644569 - 1644523 - g 70 -12.9 -3.29144 | gap 1, overlap 1644526 CGACCTGTGGGAGAA GATCCGCCCGCTGCCCGG-CGT GGCC ACGACCCGCCAGCGCGCGGCTC AGCTGCAGCGTGCCA Lcho_1549 1643111 - 1645093 + | cytochrome c-type biogenesis protein CcmF Lcho_1550 1645090 - 1645620 + | periplasmic protein thiol--disulphide oxidoreductase DsbE Lcho_1551 1645613 - 1646152 + | cytochrome C biogenesis protein Lcho_1552 1646197 - 1647528 + | TPR repeat-containing protein Lcho_1553 1647535 - 1648851 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Lcho_1554 1649609 - 1648884 - | phospholipase/carboxylesterase Lcho_1555 1650783 - 1649689 - | threonine aldolase Lcho_1557 1652053 - 1653033 + | integrase catalytic region TERM 837 1653974 - 1654008 + G 85 -17.1 -3.57792 | gap 1 CAGTTCGACGTCAGC CCGGCCGAAGCCGCGC GGCT GCGCGGCC-CGGTCGG TTTGAAGCTCGGTGG Lcho_1558 1653146 - 1654159 + | hypothetical protein TERM 838 1654137 - 1654186 + T 93 -13.6 -4.02424 | gap 2, overlap 1654138 1654140 CGCAGACGGTGTGCC TGACGAGCA--CCGGCCACGCCTG AGGT CAGGCGCCGCCGGCTTGCTCGTCC TTTCTCGTCGTTACT TERM 839 1654138 - 1654185 + T 85 -17.1 -3.00731 | gap 2, overlap 1654137 1654140 GCAGACGGTGTGCCT GACGAGCA--CCGGCCACGCCTG AGGT CAGGCGCCGCCGGCTTGCTCGTC CTTTCTCGTCGTTAC TERM 840 1654140 - 1654183 + T 76 -13.9 -3.05238 | gap 2, overlap 1654138 1654137 AGACGGTGTGCCTGA CGAGCA--CCGGCCACGCCTG AGGT CAGGCGCCGCCGGCTTGCTCG TCCTTTCTCGTCGTT Lcho_1559 1657115 - 1654197 - | glycine dehydrogenase Lcho_1560 1657578 - 1657204 - | glycine cleavage system H protein Lcho_1561 1658804 - 1657680 - | glycine cleavage system T protein TERM 841 1658983 - 1658999 + r 74 -10.9 -3.60431 | overlap 1658958 TCTCCAGTGAGGTGA CGTTCCT TTC AGGAACG TTTGCCAGTCCTTTT TERM 842 1659147 - 1659110 - R 82 -5.5 -4.72007 | gap 1, overlap 1659112 TCCTAGCAAAATAAA GTG-TAGCCCAGCCGC CGGCTGC GCGGCCGGCCGATCAC CACGGCGGATCGTCG Lcho_1562 1660157 - 1659144 - | putative exonuclease RdgC Lcho_1563 1660307 - 1661599 + | metallophosphoesterase Lcho_1564 1661603 - 1665070 + | hypothetical protein Lcho_1565 1665469 - 1665083 - | PilT domain-containing protein Lcho_1566 1665715 - 1665488 - | prevent-host-death family protein Lcho_1567 1666943 - 1665771 - | queuine tRNA-ribosyltransferase Lcho_1568 1667073 - 1667219 + | hypothetical protein Lcho_1569 1667315 - 1669618 + | TonB-dependent receptor TERM 843 1669828 - 1669779 - g 73 -10 -3.96068 | gap 3, overlap 1669780 GCAGGTCAAGAACAA CCAGCAGCTGC--CGCAGGCG-CAC CCG GTGACGCAGGCGTTGCAGCAGCTGG TGATGGCGGGGCTGA Lcho_1570 1669651 - 1670346 + | 2OG-Fe(II) oxygenase Lcho_1571 1670384 - 1671139 + | TonB family protein Lcho_1572 1671161 - 1671961 + | MotA/TolQ/ExbB proton channel Lcho_1573 1672001 - 1672420 + | biopolymer transport protein ExbD/TolR Lcho_1574 1672636 - 1673295 + | two component LuxR family transcriptional regulator Lcho_1575 1675667 - 1673334 - | histidine kinase TERM 844 1675626 - 1675600 - G 100 -14.5 -5.14965 | gap 1 AGGCCGATGAAAAAA GCCGCG-CACCT GAGC AGGTGTCGCGGC CAGTCGAACGGGGCG Lcho_1576 1676169 - 1675768 - | cytochrome c-551 precursor Lcho_1577 1677399 - 1676329 - | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase Lcho_1578 1677472 - 1677696 + | addiction module antidote Lcho_1579 1677703 - 1678107 + | death-on-curing family protein TERM 845 1678474 - 1678495 + G 72 -3.6 -4.56597 | gap 1, overlap 1678455 1678475 CACGCGGCTGCGGGT G-CGCGGCG AGTTG CGCGGCGGC TTTTTCGGCCGCGAG Lcho_1580 1678184 - 1680199 + | ATP-dependent DNA helicase RecG Lcho_1581 1680883 - 1680212 - | TetR family transcriptional regulator TERM 846 1680499 - 1680531 + g 85 -17 -3.57263 | GCTCGCGCACCGCCG CCTGCTGCAAGGCC AGCGC GGCCTGGCAGCGGG TTTCGAGCTGGCGGT Lcho_1582 1681003 - 1681980 + | ABC transporter-related protein Lcho_1583 1681977 - 1682747 + | ABC-2 type transporter TERM 847 1682808 - 1682855 + G 85 -10.4 -4.41616 | gap 1, overlap 1682805 1682809 TCAATCCCTCATCGC CGCCGGCC-TTGCCTGCGAGCAC CTG GCGGTCGAGGGCGACGGCCGGCA TTTCTTTGCCACCAT TERM 848 1682809 - 1682854 + G 70 -13.9 -3.24488 | gap 1, overlap 1682805 1682808 CAATCCCTCATCGCC GCCGGCC-TTGCCTGCGAGCAC CTG GCGGTCGAGGGCGACGGCCGGC ATTTCTTTGCCACCA Lcho_1584 1682767 - 1683045 + | BolA family protein Lcho_1585 1683177 - 1684442 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Lcho_1586 1684528 - 1685172 + | ATP phosphoribosyltransferase Lcho_1587 1685212 - 1686528 + | histidinol dehydrogenase TERM 849 1686749 - 1686712 - g 87 -11.9 -4.1899 | CGACGCGATGGAAAA CCCGTTCACGCTGCCGC CCGA GCTGCAGCATGAGCTGG GCGAGCGCCTCGGCC Lcho_1588 1686581 - 1687708 + | histidinol-phosphate aminotransferase Lcho_1589 1687705 - 1688316 + | imidazoleglycerol-phosphate dehydratase Lcho_1590 1688399 - 1689046 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Lcho_1591 1689100 - 1689849 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TERM 850 1690685 - 1690705 + G 84 -10.3 -4.26903 | overlap 1690686 AAGGCGGTGATGGCT GCGCGCGGG ATA CCCGTGCGG TTTTGATGCGCTGAA TERM 851 1690686 - 1690704 + G 70 -13.8 -3.1582 | overlap 1690685 AGGCGGTGATGGCTG CGCGCGGG ATA CCCGTGCG GTTTTGATGCGCTGA Lcho_1592 1689932 - 1690711 + | imidazoleglycerol phosphate synthase, cyclase subunit TERM 852 1690731 - 1690750 + T 100 -15 -5.4833 | opp_overlap 1690731 CTGAAGAACAAAAAA GCCGCGCT GTCC AGCGCGGC TTTTTTATTGAGTCA TERM 853 1690750 - 1690731 - T 100 -15 -5.64873 | opp_overlap 1690731 CTGAAGAACAAAAAA GCCGCGCT GTCC AGCGCGGC TTTTTTATTGAGTCA Lcho_1593 1691342 - 1690776 - | hypothetical protein TERM 854 1691185 - 1691170 - G 76 -9 -4.20148 | AGTACTTCAAAAGAA CTTCCG TCTC CGGAAG TCGTGACCTGAAAAT TERM 855 1691516 - 1691498 - R 100 -17.4 -4.99861 | CATCAACGACAAAAA GCCCCGCC ATT GGCGGGGC TGGACATCAAGCGCA Lcho_1594 1692093 - 1691545 - | hypothetical protein Lcho_1595 1692837 - 1692208 - | two component LuxR family transcriptional regulator Lcho_1596 1693991 - 1692834 - | response regulator receiver sensor signal transduction histidine kinase Lcho_1597 1694228 - 1694689 + | hypothetical protein Lcho_1598 1694763 - 1695125 + | response regulator receiver protein TERM 856 1695134 - 1695114 - f 95 -12.5 -4.25056 | GAGGTGATCAAGAAA GTGGTGCGC TGA GCGCACCCC CCCATCGATCGATCT Lcho_1599 1695173 - 1697341 + | CheA signal transduction histidine kinase Lcho_1600 1697384 - 1699168 + | methyl-accepting chemotaxis sensory transducer TERM 857 1699174 - 1699193 + F 100 -15 -5.32944 | opp_overlap 1699162 AACCTTCTGATGCAG GAGCCCGC GGAT GCGGGCTC TTTTTTCGTTGTCCA Lcho_1601 1699184 - 1700656 + | methyl-accepting chemotaxis sensory transducer Lcho_1602 1703281 - 1700657 - | hypothetical protein TERM 858 1701931 - 1701879 - G 80 -12 -4.07885 | overlap 1701859 CAGGCGCCGGCAAAA CCGCCGACGGCGAT-GCCGCCGAGCT TCC AG-TCGGCCGCCACCGCCAGCAGCAG CGCCGCAAAACCGAT TERM 859 1703117 - 1703072 - G 75 -10.4 -3.90744 | CCGGTCGGCAAAGAA GCCGACGGCGCTCAGCGC-GGC CACC GCCAGCGCC-ACCGCCACCAGC ATCAGGCGCAGTTCG Lcho_1603 1703458 - 1704294 + | extradiol ring-cleavage dioxygenase class III protein subunit B Lcho_1604 1705079 - 1704312 - | hypothetical protein TERM 860 1705109 - 1705129 + H 72 -13.3 -3.14962 | overlap 1705107 1705106 TCGTATTTTCTCAGG CTGTCACGG TGG CCGTGGCAG TGGTTTTCGTGCTCG Lcho_1605 1705117 - 1706274 + | 2-alkenal reductase Lcho_1606 1707030 - 1706281 - | Sec-independent protein translocase, TatC subunit Lcho_1607 1707596 - 1707108 - | twin-arginine translocation protein, TatB subunit Lcho_1608 1707875 - 1707627 - | twin arginine-targeting protein translocase Lcho_1609 1708305 - 1707958 - | histidine triad (HIT) protein Lcho_1610 1708689 - 1708324 - | phosphoribosyl-ATP diphosphatase Lcho_1611 1709075 - 1708686 - | phosphoribosyl-AMP cyclohydrolase Lcho_1612 1709211 - 1710266 + | 4-hydroxythreonine-4-phosphate dehydrogenase Lcho_1613 1711147 - 1710281 - | 4-hydroxybenzoate polyprenyl transferase TERM 861 1710347 - 1710327 - G 76 -8.2 -4.1964 | GCGAAGACCGCAAAA CCGAGCCA GTGGT TGGCGCGG AAGGCCTTGAAACAG TERM 862 1710545 - 1710503 - G 83 -17 -3.29461 | opp_overlap 1710515, overlap 1710492 GAAGGCGGCGTAGAA GGCCATCACGCCGATCACGT CGA ACGCGCCCAGCGTGATCGCC GAGGTCTTGATGCCG Lcho_1614 1713492 - 1711177 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Lcho_1615 1714688 - 1713753 - | LysR family transcriptional regulator TERM 863 1714983 - 1714971 - g 83 -5.5 -4.8048 | TCCTCACATGAAAAA GACGC ACT ACGTC CTGATGGCGCTGGCG Lcho_1616 1714963 - 1715622 + | cytochrome c class I TERM 864 1715646 - 1715667 + F 100 -17.3 -4.56736 | opp_overlap 1715640 1715639 ACGCACAACGGCTGA CGCCCGGGT CACA ACCCGGGCG TTTTGCTTGTTGCAT TERM 865 1715802 - 1715777 - g 93 -2.4 -5.42259 | opp_overlap 1715800, overlap 1715778 TGATGCTCAAAAAAA TCCGCACCGA TCAGCT TCGGCTCGGC ATGTTTCTCCACGAG Lcho_1617 1715764 - 1716996 + | metal dependent phosphohydrolase TERM 866 1717246 - 1717193 - g 84 -10.3 -4.27519 | gap 3 AGTGCACAAGACAAA CACCTGCCCCCGACCGAGCGGCGCCT GCAGA AGGC-CCGCGAGGACG-G-GCAGGTG GCGCGCTCGCGCGAT Lcho_1618 1717169 - 1718326 + | flagellar biosynthetic protein FlhB Lcho_1619 1718323 - 1720425 + | flagellar biosynthesis protein FlhA TERM 867 1721100 - 1721078 - g 73 -14.8 -3.19463 | overlap 1721091 CCGACCATGCACGAA GCGCTGCTGC AAA GCCGCAGCGC GGCGCCCGCACCGGC Lcho_1620 1720502 - 1722280 + | GTP-binding signal recognition particle TERM 868 1722342 - 1722377 + G 70 -12.7 -3.41051 | gap 3, overlap 1722332 CCGTTCCGCCGCACC CAGCCGGCCGATCAGGCC GAC GGCCTG--C-GCCGGCTG TTCTCGTCGCGCTCG Lcho_1621 1722303 - 1723124 + | protein antiactivator of flagellar biosynthesis Lcho_1622 1723142 - 1723858 + | RNA polymerase, sigma 28 subunit, FliA/WhiG Lcho_1623 1723995 - 1725359 + | methyl-accepting chemotaxis sensory transducer Lcho_1624 1725669 - 1725394 - | hypothetical protein Lcho_1625 1726275 - 1725793 - | hemerythrin-like metal-binding protein TERM 869 1726004 - 1726057 + g 74 -9.6 -4.07568 | gap 3 TCGTCGACCACCTGG CGGCGCAC-GTCGCGCAGCACGTCGAG CAC CTGGCCGTGCTG-GCGGCTGTG-GCAG TTTTCCGGCGCGAAA Lcho_1626 1727629 - 1726346 - | Glu/Leu/Phe/Val dehydrogenase TERM 870 1726943 - 1726922 - G 70 -13.7 -3.14132 | GCCGGCCTGCACGAA CAGCTCGGC CGCG GCCGAGCCG ACATTGCCGAAACCC Lcho_1627 1728575 - 1727760 - | pyrroline-5-carboxylate reductase TERM 871 1728339 - 1728321 - G 76 -11.6 -3.86897 | CGCACCGCCGACAAA CGCGGCGC AGG GCGCGGCG GCGTCGGCAAAGCTC Lcho_1628 1731713 - 1728624 - | delta-1-pyrroline-5-carboxylate dehydrogenase TERM 872 1731795 - 1731805 + H 80 -5.4 -4.82901 | TCCAGCTTATGCCTT TCCA GCT TGGA TTTTTCTCCAAACAA Lcho_1629 1731849 - 1732328 + | AsnC family transcriptional regulator Lcho_1630 1733049 - 1732360 - | alanine racemase domain-containing protein Lcho_1631 1733111 - 1734154 + | twitching motility protein Lcho_1632 1734180 - 1735316 + | twitching motility protein Lcho_1633 1735321 - 1737231 + | putative signal transduction histidine kinase Lcho_1634 1737938 - 1737228 - | two component LuxR family transcriptional regulator Lcho_1635 1738128 - 1739582 + | hypothetical protein Lcho_1636 1739656 - 1740549 + | 6-phosphogluconate dehydrogenase NAD-binding TERM 873 1740571 - 1740596 + T 86 -10.3 -4.30719 | overlap 1740572 1740574 GCGCGACCTGATGCG CAACGGCGGCC CGCG GGCCGCCGTCC TTTCTTGTGCCCGCC TERM 874 1740572 - 1740595 + T 78 -13.8 -3.1811 | overlap 1740571 1740574 CGCGACCTGATGCGC AACGGCGGCC CGCG GGCCGCCGTC CTTTCTTGTGCCCGC TERM 875 1740574 - 1740593 + T 85 -16.4 -3.15008 | overlap 1740572 1740571 CGACCTGATGCGCAA CGGCGGCC CGCG GGCCGCCG TCCTTTCTTGTGCCC Lcho_1637 1741320 - 1740631 - | transport-associated Lcho_1638 1741910 - 1741317 - | phosphoheptose isomerase Lcho_1639 1742357 - 1741947 - | hypothetical protein TERM 876 1742292 - 1742309 + g 82 -4.7 -4.8048 | overlap 1742284 1742293 GTCTTCTGCCGCCCG ACCGCGG CTTG CTGCGGG TTTTTCATCTGCACC Lcho_1640 1742374 - 1743438 + | uroporphyrin-III C/tetrapyrrole methyltransferase Lcho_1641 1743563 - 1745830 + | diguanylate cyclase with PAS/PAC sensor Lcho_1642 1747870 - 1745840 - | oligopeptidase A Lcho_1643 1748730 - 1747867 - | methenyltetrahydrofolate cyclohydrolase TERM 877 1748822 - 1748792 - R 100 -15.5 -4.25104 | opp_overlap 1748799, overlap 1748794 GCGCGCGTATCAAAA CACGAAAGGCCGC ATGTA GCGGCCTTTCGTT GCGCAAGGAGGATCA TERM 878 1748820 - 1748794 - R 93 -18.1 -3.73042 | opp_overlap 1748799, overlap 1748792 GCGCGTATCAAAACA CGAAAGGCCGC ATGTA GCGGCCTTTCG TTGCGCAAGGAGGAT TERM 879 1748799 - 1748815 + r 75 -10.8 -3.90112 | opp_overlap 1748794 1748792 TATCAAAACACGAAA GGCCGC ATGTA GCGGCC TTTCGTTGCGCAAGG Lcho_1644 1749458 - 1748835 - | two component LuxR family transcriptional regulator Lcho_1645 1751887 - 1749455 - | PAS/PAC sensor signal transduction histidine kinase TERM 880 1751957 - 1751971 + H 89 -10 -4.52857 | overlap 1751945 GGGTCGGCTGCGAGC CGCTTG GTG CAAGCG TTTTGTCTGAGAACT TERM 881 1752032 - 1752070 + H 76 -9.5 -4.16443 | gap 1, overlap 1752035 1752039 TGCGCGACGCTCTGC GGACGTGCCGTGCGACCC CGTC GGGACGCACGAT-CGTTC TTTGTAATTTCATAT TERM 882 1752035 - 1752067 + H 71 -7.6 -4.1851 | gap 1, overlap 1752032 1752039 GCGACGCTCTGCGGA CGTGCCGTGCGACCC CGTC GGGACGCACGAT-CG TTCTTTGTAATTTCA TERM 883 1754365 - 1754329 - g 72 -13 -3.50853 | gap 1, overlap 1754332 CCTGCTCAACGAGAA CTACCCGATGCCCGGCC TGAA GGC-GGGCACCGAGGAG CAGATCATCAAGGGC Lcho_1646 1752209 - 1754920 + | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type TERM 884 1755542 - 1755514 - g 75 -15.9 -3.09516 | GTCGCGATCATCGAA GGCGCGGCCGGTG CCG CACCGGCTGCGGC TGCCCCGGCGCCTGC Lcho_1647 1754941 - 1756605 + | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase TERM 885 1757262 - 1757244 - g 74 -4.5 -4.48987 | TGGCCACAAGGAAAA GGTCATC GGCAA GCTGACC GGCGGCCTGGCCGCG TERM 886 1757393 - 1757357 - g 76 -8.6 -4.16842 | gap 1, overlap 1757358 TGCAGGTCGAAGAAA CCGCCGGCACCGGCACC GAGC GG-GCCGGCGCGAGCAA GGTCGTGAAGTTCAA Lcho_1648 1756624 - 1758447 + | dihydrolipoamide dehydrogenase TERM 887 1758489 - 1758514 + T 78 -16.1 -2.70932 | opp_overlap 1758484 GCGCACTGAACGGCG GTCGACCGGGC TCGG GCCCGGTCGCC TCGTTCGACAAGCCC TERM 888 1758551 - 1758526 - T 86 -16.1 -3.28712 | opp_overlap 1758526 CGCCTCGTTCGACAA GCCCGCCGTCC GACC GGACCGCGGGC TTTTTTCATGGCACG TERM 889 1758526 - 1758551 + T 100 -16.1 -5.14563 | opp_overlap 1758526 CGCCTCGTTCGACAA GCCCGCCGTCC GACC GGACCGCGGGC TTTTTTCATGGCACG Lcho_1649 1759558 - 1758557 - | beta-lactamase domain-containing protein TERM 890 1759861 - 1759898 + G 73 -14.7 -3.21099 | gap 1, overlap 1759863 CCCAGCCCTTGCGTG CGGGCGC-CGGCGGCGCC GAC GGCGCGGCCGAGCTGCCG TTCGTGCTGCGCCAG TERM 891 1759863 - 1759897 + G 71 -15.7 -2.52516 | gap 2, overlap 1759861 CAGCCCTTGCGTGCG GGC-GC-CGGCGGCGCC GAC GGCGCGGCCGAGCTGCC GTTCGTGCTGCGCCA Lcho_1650 1759677 - 1760312 + | hypothetical protein TERM 892 1760997 - 1761039 + G 78 -11.9 -3.96148 | GCCGGCGATCGTGCT GCTGCACGGCGGCG-CGCTGG CCA CCAGCGGCGACGCCC-GCCGC TTTCTGCTCAAGGAC Lcho_1651 1760323 - 1761243 + | ApbE family lipoprotein TERM 893 1761253 - 1761309 + T 95 -18 -3.8512 | opp_overlap 1761245 1761261 1761262, overlap 1761253 1761255 AACTGAATCGGCGAA GG-CAGAAACGGGGAGGCCCGGACTGCC TGT GCCAGCCCGGGCCTCCCC-TCCCTGTCC TTCTTGTGCTCCCTG TERM 894 1761253 - 1761308 + T 100 -20.4 -2.9059 | gap 1, opp_overlap 1761245 1761261 1761262, overlap 1761253 1761255 AACTGAATCGGCGAA GGCAGAAACGGGGAGGCCCGGACTGCC TGT GCCAGCCCGGGCCTCCCC-TCCCTGTC CTTCTTGTGCTCCCT TERM 895 1761255 - 1761306 + T 93 -19.4 -3.00003 | gap 1, opp_overlap 1761245 1761261 1761262, overlap 1761253 1761253 CTGAATCGGCGAAGG CAGAAACGGGGAGGCCCGGACTGCC TGT GCCAGCCCGGGCCTCCCC-TCCCTG TCCTTCTTGTGCTCC TERM 896 1761301 - 1761261 - T 100 -24.7 -3.97368 | opp_overlap 1761255 1761253 1761253, overlap 1761262 CGGCGAAGGCAGAAA CGGGGAGGCCCGGACTGCC TGT GCCAGCCCGGGCCTCCCCT CCCTGTCCTTCTTGT TERM 897 1761300 - 1761262 - T 100 -28.2 -2.981 | opp_overlap 1761255 1761253 1761253, overlap 1761261 GGCGAAGGCAGAAAC GGGGAGGCCCGGACTGCC TGT GCCAGCCCGGGCCTCCCC TCCCTGTCCTTCTTG Lcho_1652 1763612 - 1761387 - | hypothetical protein TERM 898 1763201 - 1763229 + g 72 -5.1 -4.36411 | CCATCGCGAAGAAGT CCATGCCGTCG TGGTGAT CGCCGGCGCGG TTTTCGTAGTTGCTG TERM 899 1763714 - 1763769 + H 91 -17.5 -3.29263 | opp_overlap 1763714 ATCGCCTGCATGACA GCGCAAGCGCCGCATCGCCGTCC-GCG GGTG CGCCGGGCCGCGGCGCGGCGGT-GCGC TTGTCAAAACGCTGT TERM 900 1763769 - 1763714 - H 75 -15.3 -2.78463 | opp_overlap 1763714 ATCGCCTGCATGACA GCGCAAGCGCCGCATCGCCGTCC-GCG GGTG CGCCGGGCCGCGGCGCGGCGG-TGCGC TTGTCAAAACGCTGT TERM 901 1763962 - 1764006 + G 84 -2.8 -5.06451 | gap 2, overlap 1763979 1763994 CTGGTGATCGAGGAG CCCGCCATCCGCGAACTGCTGG CGT CGAGCT-TTCG-GCATGCCGGG TTTTTTCCGGTGCTG Lcho_1653 1763896 - 1764687 + | two component transcriptional regulator Lcho_1654 1764862 - 1765866 + | phosphate binding protein TERM 902 1765892 - 1765920 + F 100 -19.6 -4.11216 | CTGAAATGTCCCCGT CAGGCGGCCCGG TTCAT CCGGGCTGCCTG TTTTCACGATAACCA Lcho_1655 1765990 - 1766925 + | phosphate ABC transporter, inner membrane subunit PstC Lcho_1656 1766928 - 1767848 + | phosphate ABC transporter, inner membrane subunit PstA Lcho_1657 1767910 - 1768704 + | phosphate ABC transporter, ATPase subunit Lcho_1658 1768748 - 1769455 + | phosphate uptake regulator, PhoU Lcho_1659 1769489 - 1770226 + | two component transcriptional regulator Lcho_1660 1770355 - 1770666 + | hypothetical protein Lcho_1661 1770679 - 1771323 + | nitroreductase TERM 903 1771372 - 1771347 - T 79 -14.7 -3.01712 | opp_overlap 1771351, overlap 1771351 GCCTCGGCCGGAACA GGAACGCCCGC TGTT GCGGGCGTTTC ATCGTGTGGTGCGAT TERM 904 1771351 - 1771368 + T 88 -14.1 -3.82665 | opp_overlap 1771347 1771351 CGGCCGGAACAGGAA CGCCCGC TGTT GCGGGCG TTTCATCGTGTGGTG TERM 905 1771368 - 1771351 - T 80 -14.1 -3.36273 | opp_overlap 1771351, overlap 1771347 CGGCCGGAACAGGAA CGCCCGC TGTT GCGGGCG TTTCATCGTGTGGTG Lcho_1662 1771659 - 1771420 - | cold-shock DNA-binding domain-containing protein Lcho_1663 1771850 - 1772197 + | ATP-dependent Clp protease adaptor protein ClpS TERM 906 1772376 - 1772350 - g 73 -15.2 -3.1855 | opp_overlap 1772353 GCCGCCAACATCGAA GACCTGCGCAAG AGC CTTGCGCAGTTC ATCAAGGAGAACACG TERM 907 1772353 - 1772373 + G 73 -15.5 -3.14132 | opp_overlap 1772350 GCCAACATCGAAGAC CTGCGCAAG AGC CTTGCGCAG TTCATCAAGGAGAAC TERM 908 1772648 - 1772628 - g 73 -11.1 -3.7282 | CCACGGCATCAAGAA GTCGGATCC GCC GGAGCCGAC CAAGTCGAACGAGTC Lcho_1664 1772194 - 1774494 + | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 909 1774519 - 1774538 + T 100 -15 -5.40072 | opp_overlap 1774521 GCGGCCGACGCGAGA CAGGCGCC TGCG GGCGCCTG TTTTTTTGCCCGGAA Lcho_1665 1775358 - 1774570 - | hypothetical protein Lcho_1666 1776200 - 1775352 - | UDP-2,3-diacylglucosamine hydrolase Lcho_1667 1776703 - 1776197 - | peptidyl-prolyl cis-trans isomerase cyclophilin type Lcho_1668 1777275 - 1776706 - | peptidyl-prolyl cis-trans isomerase cyclophilin type Lcho_1669 1779200 - 1777272 - | ErfK/YbiS/YcfS/YnhG family protein TERM 910 1777905 - 1777931 + g 72 -11.5 -3.65314 | GGAGGTGATGTAGTA GGTGCCCAGCG GCGTG CGCTGGTCGCC TTCTTCGCGCTTGCC TERM 911 1779339 - 1779351 + H 70 -4.8 -4.42287 | GCCGGTCGCGACGGT CCGT CAGGC ACGG TTTCTTCCTTGTTTG Lcho_1670 1779428 - 1780801 + | cysteinyl-tRNA synthetase Lcho_1671 1780816 - 1781466 + | HhH-GPD family protein Lcho_1672 1781517 - 1782485 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 912 1782528 - 1782557 + F 86 -14.3 -3.71527 | opp_overlap 1782534 CCCTGTGACGATCAT CGGAAACGGCTGC GCAA GCAGCCGTTCTCG TTTGCATGCTTGACG TERM 913 1782551 - 1782534 - f 81 -12.7 -3.62572 | opp_overlap 1782528 GACGATCATCGGAAA CGGCTGC GCAA GCAGCCG TTCTCGTTTGCATGC TERM 914 1783030 - 1783072 + G 79 -18.5 -2.7035 | gap 2, overlap 1783026 GCGCGAGGGCCTGAC CTGGG-CGCGG-CCGTGGCTG GAT CGGCCGCGGTCCGCGATCCAG TCGTATGTCGATGCG TERM 915 1783453 - 1783421 - g 76 -15.6 -3.14132 | gap 1, opp_overlap 1783412 CGGCTTGCCGACGAA CTGCCG-CACGCGCC GGAC GGCGCGTGGCGGCAT GCGGCGGGTGTCGTG Lcho_1673 1782563 - 1783936 + | tRNA(Ile)-lysidine synthetase Lcho_1674 1784025 - 1785293 + | aspartate kinase TERM 916 1785450 - 1785431 - f 100 -12.2 -4.7078 | opp_overlap 1785431 CCAAGTATCGAAAAA GCCTCTGA CTCG TCAGAGGC TTTTTTCGTTCTGCA TERM 917 1785431 - 1785450 + F 100 -12.2 -5.32944 | opp_overlap 1785431 CCAAGTATCGAAAAA GCCTCTGA CTCG TCAGAGGC TTTTTTCGTTCTGCA TERM 918 1785512 - 1785529 + F 71 -9.1 -3.75897 | CGAGTCTTCGTCTAT CACGCCG GCGT TGGCGTG TTTCCATTCAACCTT Lcho_1675 1785560 - 1786984 + | 3-isopropylmalate dehydratase, large subunit Lcho_1676 1786997 - 1787644 + | 3-isopropylmalate dehydratase, small subunit Lcho_1677 1787677 - 1788780 + | 3-isopropylmalate dehydrogenase Lcho_1678 1788876 - 1790003 + | aspartate-semialdehyde dehydrogenase TERM 919 1790751 - 1790802 + G 70 -13.7 -3.14132 | gap 3 GCCATCGCCGCTGCG CCGGCTCCGGCACC-GACCCGAGTCG AGC CG-C-CGGTTCAGGTGCCGGCTCCGG TTGCTGCGGCACCGA TERM 920 1791559 - 1791594 + G 75 -14.7 -3.42996 | gap 1 CGCCTGAGCCCGCGC CGGT-GGCGGCGTCGG CCGCT TCGGCGCCGCCTGCCG TTGTCGTCGCTGCTG Lcho_1679 1790265 - 1792916 + | putative transmembrane protein TERM 921 1793621 - 1793637 + G 72 -5.7 -4.36914 | overlap 1793607 CGTCGCGTGACCGCC GGCTGGC GGC GCCGACC TTTTCTCCCGACGGG Lcho_1680 1792948 - 1793736 + | tRNA pseudouridine synthase A Lcho_1681 1793748 - 1794410 + | phosphoribosylanthranilate isomerase Lcho_1682 1794428 - 1795714 + | tryptophan synthase, beta subunit Lcho_1683 1795711 - 1796526 + | tryptophan synthase, alpha subunit Lcho_1684 1796523 - 1797395 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit TERM 922 1797419 - 1797438 + F 86 -12.8 -3.81755 | GACTGAATTTCCCGG GGGGCGTC GCGA GGCGCCCC TTGTCTTTGAGGCCT Lcho_1685 1797487 - 1798800 + | FolC bifunctional protein Lcho_1686 1798978 - 1799727 + | sporulation domain-containing protein Lcho_1687 1799739 - 1800248 + | colicin V production protein TERM 923 1800285 - 1800259 - f 70 -11.5 -3.33261 | opp_overlap 1800259, overlap 1800260 GCTGAACGTGGACAA TGCGGACCTGC TGTCG GCAGGCCCGCC TGGTTACCAACCGGT TERM 924 1800284 - 1800260 - f 74 -15 -2.59742 | opp_overlap 1800259, overlap 1800259 CTGAACGTGGACAAT GCGGACCTGC TGTCG GCAGGCCCGC CTGGTTACCAACCGG Lcho_1688 1800338 - 1801855 + | amidophosphoribosyltransferase Lcho_1689 1801867 - 1803108 + | O-succinylhomoserine sulfhydrylase TERM 925 1803496 - 1803481 - g 77 -6.8 -4.56133 | gap 1 GGCCAACAAGGAAAA GCCG-CG CTA CGACGGC ACCTGGCGGCCCGAG Lcho_1690 1803113 - 1804519 + | glutamyl-tRNA synthetase TERM 926 1804904 - 1804937 + T 93 -11.1 -4.62471 | gap 1, overlap 1804900 1804907 TCCGCCAAGTTTTGC CT-GCGGGCCATGCTT AAT AATCATGGCCCGTTAG TTTTTAGAAGTTGAA TERM 927 1804907 - 1804933 + T 89 -15.2 -3.81256 | overlap 1804900 1804904 GCCAAGTTTTGCCTG CGGGCCATGCTT AAT AATCATGGCCCG TTAGTTTTTAGAAGT TERM 928 1805147 - 1805119 - T 100 -19 -4.35461 | opp_overlap 1805119 CCAACATCATGAAAA GCCGCTGCAAGT TGCTG ACTTGCAGCGGC TTTCTTGTATTCAGT TERM 929 1805119 - 1805147 + T 100 -19.7 -4.46675 | opp_overlap 1805119 CCAACATCATGAAAA GCCGCTGCAAGTT GCT GACTTGCAGCGGC TTTCTTGTATTCAGT Lcho_1691 1806150 - 1805158 - | glucokinase TERM 930 1806228 - 1806201 - R 75 -9.7 -3.9693 | overlap 1806202 GATGGACGCAAACAA GTGCGCCGCGC ATCGTA GCGCGGCGCTG TGCCCGTGTGGCGTG TERM 931 1806227 - 1806202 - R 71 -13.2 -2.97676 | overlap 1806201 ATGGACGCAAACAAG TGCGCCGCGC ATCGTA GCGCGGCGCT GTGCCCGTGTGGCGT TERM 932 1806322 - 1806265 - R 78 -12.8 -3.53722 | gap 3 GTTACATGCAGAGAA CCACCT--G-CGAGGCGACTGCCGCCGAG TGC CTCGACGGCAGCCGATTCGACTCAGGCGG CTAGCCGGATCTCGG Lcho_1692 1807382 - 1806315 - | ABC transporter-related protein Lcho_1693 1808237 - 1807389 - | binding-protein-dependent transport systems inner membrane component TERM 933 1808199 - 1808184 - G 78 -2.4 -4.77036 | overlap 1808185 1808195 GGGCAGCAGGAAAAA CGCCGC GAAC ACGGCC AGCAGGCCGAACAGG Lcho_1694 1809137 - 1808250 - | binding-protein-dependent transport systems inner membrane component TERM 934 1809102 - 1809073 - G 76 -11.5 -3.83066 | gap 1 AAGGACAGGACGAAA CTGGGTGCCA-GCA CGA TGCGTGGCAACCAG CGGTCCAGCCGCACG TERM 935 1809289 - 1809249 - R 71 -12.6 -3.22298 | gap 2, opp_overlap 1809266 1809270, overlap 1809272 GGCAGCGAGCACGAA GGCCCGATGCCGGCACGGCA AGA TGCCTTG-CGG-AGCGGGCC TTGCGCCCGCTCCGG Lcho_1695 1810577 - 1809315 - | extracellular solute-binding protein TERM 936 1809861 - 1809891 + g 84 -10.4 -4.21194 | GTTCTTGTCGGTGTA GGTCTTGACCTTCT TGA AGGTGGTCATGACC TTTTCCATCGTCGCG Lcho_1696 1812237 - 1810717 - | histidine kinase Lcho_1697 1812969 - 1812271 - | two component transcriptional regulator TERM 937 1812835 - 1812783 - G 72 -12.9 -3.55444 | gap 3, overlap 1812786 GGCGTACCCGCGAAA CCACGGTCAGC-CCGTCGACCATCGG CAGG CCGA-GGTCGACGATGCCGA-CGTCG AAGGACTGGCGGATC Lcho_1698 1813784 - 1812987 - | short-chain dehydrogenase/reductase SDR TERM 938 1813909 - 1813929 + H 100 -7.6 -5.75342 | gap 1 CGCTGATCGGGCGAT TGGGC-GGA GGCA TCCAGCCCA TTTTTTTTGCGCGAA Lcho_1699 1814127 - 1814678 + | hypothetical protein Lcho_1700 1814675 - 1816153 + | NusA antitermination factor Lcho_1701 1816206 - 1819181 + | translation initiation factor IF-2 TERM 939 1819204 - 1819237 + F 83 -17.5 -2.52896 | opp_overlap 1819207, overlap 1819207 TTGCTCTCACCCGAA CAAGCCCCGCCCTCT GACA AGAAGGTGGGGCTTG TCCGTTGGGAGCTGC TERM 940 1819234 - 1819207 - f 81 -13.4 -3.65046 | opp_overlap 1819204 1819207 CTCTCACCCGAACAA GCCCCGCCCTCT GACA AGAAGGTGGGGC TTGTCCGTTGGGAGC TERM 941 1819207 - 1819234 + F 77 -13.4 -3.41878 | opp_overlap 1819207, overlap 1819204 CTCTCACCCGAACAA GCCCCGCCCTCT GACA AGAAGGTGGGGC TTGTCCGTTGGGAGC Lcho_1702 1819269 - 1819640 + | ribosome-binding factor A TERM 942 1819753 - 1819697 - g 70 -14.2 -3.17723 | gap 1 CGACGCCCAAGCCAA CGCCGCCACCGGTGCCCGCCGCACCGA TGCG CCGACGC-GCGTGCGCCTGCCGCGGCG TCCGGTGCACGGCGT Lcho_1703 1819668 - 1820687 + | tRNA pseudouridine synthase B Lcho_1704 1820684 - 1822504 + | GTP-binding protein TypA TERM 943 1822554 - 1822570 + F 80 -15.1 -3.14878 | opp_overlap 1822509, overlap 1822509 1822506 1822552 GCTTGACGATTGCCC GGGCCGC TTT GCGGCCC TCTTCAATTGCGGAG Lcho_1705 1822594 - 1823511 + | hypothetical protein Lcho_1706 1824297 - 1823584 - | hypothetical protein Lcho_1707 1825538 - 1824399 - | pyridine nucleotide-disulfide oxidoreductase family protein Lcho_1708 1826389 - 1825535 - | hypothetical protein TERM 944 1826220 - 1826239 + g 85 -4.2 -5.00616 | gap 1, overlap 1826221 CGCGAGGCCTTGCCG C-CGTCGAG CAG CACGACGTG TTTTTTCAGCAGCGC TERM 945 1826338 - 1826282 - G 71 -15 -3.05384 | GTGGCTGTGATCGAA GGCGCCGGCCTGCGCCAGCG-CGGGCCC GGC GAGCAGGCCGCAGGC-CAGTCCGGCACC CAGCGTCAGCAGCTG Lcho_1709 1828548 - 1826386 - | SNARE associated Golgi protein TERM 946 1827317 - 1827263 - G 71 -8.3 -4.08767 | gap 1, opp_overlap 1827286 CCCAGCCGCGCAAAA CTCTGCGCCAGCTCGCAGCCGATCGG CCCG CCGCCCAGC-ACCAGCAGGCGCCGCG GCAGTTCGGTCAGGC Lcho_1710 1828646 - 1828548 - | hypothetical protein TERM 947 1829085 - 1829124 + G 73 -10.7 -3.76402 | gap 2, overlap 1829086 CCCGAGCGTGCGGCC GCGCCGGTCGGGGTGGCCG CGAT CGGCCACC--GGCTGGCGA TTTCGTGGGTCGAAT TERM 948 1829315 - 1829351 + G 76 -15.7 -3.14344 | GATGCTGGCCTACAT GGGCGGCGCCCAGCTGC ACC GCATCGGCGCGCCGTCC TTCATCCCCGACGTG Lcho_1711 1828773 - 1829882 + | hypothetical protein Lcho_1712 1829886 - 1830644 + | ABC transporter-related protein Lcho_1713 1830641 - 1831711 + | hypothetical protein Lcho_1714 1831769 - 1832467 + | hypothetical protein Lcho_1715 1833442 - 1832510 - | patatin Lcho_1716 1834074 - 1833439 - | hypothetical protein Lcho_1717 1835477 - 1834071 - | hypothetical protein TERM 949 1834434 - 1834377 - G 85 -16.8 -3.53761 | gap 1, overlap 1834365 CAAGGCGTCGGGAAA GGCCGCCAGCAACGCCGCGCGGGCCCG GGCGT CGGGCATGCGCGGCAC-GCCGTCGGGC GTGAAGGCGCGGTAG TERM 950 1835316 - 1835273 - G 78 -18 -2.62184 | gap 1 CGTGCTGCGAGACCA CGCCGGCCCAGCCGCG-GCGG CGC CCGCGCGCGGCCTGGGCGTCG GCAAAGCGGCGCAGG Lcho_1718 1836142 - 1835474 - | methyltransferase type 11 Lcho_1719 1836502 - 1836152 - | small multidrug resistance protein Lcho_1720 1837360 - 1836524 - | phosphonate ABC transporter, inner membrane subunit TERM 951 1836806 - 1836830 + g 77 -11.3 -4.08216 | GCCTTGCGCGCGCAG CGCTTCGCCGG GGC CGGGCGGGGCG TTTTCGAGCGCCTCG Lcho_1721 1838225 - 1837377 - | binding-protein-dependent transport systems inner membrane component Lcho_1722 1839061 - 1838222 - | ABC transporter-related protein TERM 952 1838858 - 1838804 - G 70 -14.1 -3.14132 | gap 1, overlap 1838806 CTGCGGCGCCAGGAA CAGC-CGCCCGCGCAGCCGCTGCAGC GCAC GCCGCGGCAGCTGCCAGGGCGCGACG CCGTCGAGCGTCAAG TERM 953 1838854 - 1838806 - G 79 -16.6 -3.13403 | gap 1, overlap 1838804 GCGGCGCCAGGAACA GCCGCCCGCGCAGCCGCTGCAGC GCAC GCCGCGGCAGCTGCCAGGGC-GC GACGCCGTCGAGCGT Lcho_1723 1839942 - 1839079 - | phosphonate ABC transporter, periplasmic phosphonate-binding protein Lcho_1724 1840119 - 1841105 + | hypothetical protein Lcho_1725 1842344 - 1841115 - | hypothetical protein TERM 954 1841464 - 1841492 + g 74 -4.3 -4.58395 | overlap 1841433 1841466 GCCGGCTGCGCGAGA TCGAGCGCCAGCC AGT GGCCGTCGCGCCA TTTTTGCCAGGTGCC TERM 955 1841752 - 1841719 - G 80 -9.6 -4.27316 | gap 3, overlap 1841720 TTGTCGAACGCAAAA CCGG-GCCCGGCATGGC CGA GCC--GCCAGGCGCCGG CGTCGAAATCGAGCG TERM 956 1843240 - 1843257 + G 81 -8.3 -4.56597 | CCCTGCAGGCGCAAT GCGCCGC TCGC GCGCCGC TTTTTGCCCCCGACC Lcho_1726 1842363 - 1843364 + | glycosyl transferase group 1 Lcho_1727 1843379 - 1844446 + | selenide, water dikinase Lcho_1728 1844692 - 1844471 - | hypothetical protein TERM 957 1845507 - 1845489 - g 70 -4.4 -4.41494 | overlap 1845491 GAGCCCGAAGGAAAA CCGCGACA TCC CGCCGCTG CGCTACGAGCAGGTC Lcho_1729 1844917 - 1845945 + | YjbN family TIM-barrel protein TERM 958 1847204 - 1847232 + G 76 -16.7 -2.78463 | overlap 1847170 GCCGCAGCAGTTCGA GCGGCTGTTCGGC TCG GCCGAGCAGGCGC TGTCGTCGGCCAAGT Lcho_1730 1846077 - 1847300 + | diguanylate cyclase TERM 959 1847448 - 1847438 - g 71 -6.8 -4.25104 | overlap 1847439 GCTGTGGCAGGAAAA GCTG CGC CAGC GCGAGCGCGCGGCGG Lcho_1731 1847304 - 1849217 + | diguanylate cyclase with PAS/PAC sensor Lcho_1732 1850122 - 1849199 - | hypothetical protein Lcho_1733 1850966 - 1850127 - | ornithine carbamoyltransferase Lcho_1734 1851910 - 1850963 - | binding-protein-dependent transport systems inner membrane component Lcho_1735 1853027 - 1851921 - | spermidine/putrescine ABC transporter ATPase subunit Lcho_1736 1854189 - 1853062 - | extracellular solute-binding protein Lcho_1737 1855853 - 1854357 - | aldehyde dehydrogenase TERM 960 1855556 - 1855578 + g 71 -9.1 -4.07568 | overlap 1855558 TCTCGAGCAGCGCCA GTTCCTCGC GCGCG GCGAGGATC TTTTCACCGAAGCGC Lcho_1738 1857290 - 1855878 - | aminotransferase class-III Lcho_1739 1858689 - 1857325 - | glutamate--putrescine ligase Lcho_1740 1859567 - 1858797 - | peptidase C26 Lcho_1741 1861118 - 1859793 - | FAD dependent oxidoreductase TERM 961 1860440 - 1860484 + g 82 -14.2 -3.76224 | gap 1 TGCCGCGGGCGGTGT GCAGCGTGGCGGGCTGGC-CG CGTT CGAGCCGGGTCACCGCGCTGC TTTCGTAGATGCGCA Lcho_1742 1862505 - 1861180 - | aminotransferase class-III Lcho_1743 1863146 - 1862577 - | hemerythrin HHE cation binding domain-containing protein TERM 962 1862963 - 1862940 - G 70 -2.2 -4.56597 | overlap 1862942 GTGTTCGCCGAAAAA GCCGTGCACC TCGA GGGCCAGGGC GCGCATCGGCTGCGC Lcho_1744 1863526 - 1864842 + | isocitrate lyase TERM 963 1864893 - 1864913 + F 100 -14 -4.87291 | CGACCCGATGCACGG GCCCAGGG CGATC CCCTGGGC TTTTTGCTTAGAATC TERM 964 1865060 - 1865077 + F 100 -9.8 -5.84011 | opp_overlap 1865060 CTTCCTCATGAGAAA GCGCGG CAACCA CCGCGC TTTTTGTTTTTTGTT TERM 965 1865077 - 1865060 - f 78 -10.5 -3.96148 | opp_overlap 1865060 CTTCCTCATGAGAAA GCGCGGC AACC ACCGCGC TTTTTGTTTTTTGTT TERM 966 1866885 - 1866867 - g 100 -8.2 -5.26875 | TGCGCAACGAAAAAA TCACGTAT AAA ATACGCGA GCATTCGTTGCAAAA Lcho_1745 1865126 - 1867039 + | threonyl-tRNA synthetase Lcho_1746 1867267 - 1867674 + | initiation factor 3 Lcho_1747 1867799 - 1868002 + | ribosomal protein L35 Lcho_1748 1868030 - 1868386 + | ribosomal protein L20 TERM 967 1868439 - 1868458 + F 100 -8.6 -5.60993 | gap 1, opp_overlap 1868439 CGTCGAGCACTGAAA GGCCGACAC TTC GT-TCGGCC TTTTTTTGTGCCCGA Lcho_1749 1868520 - 1869563 + | phenylalanyl-tRNA synthetase, alpha subunit Lcho_1750 1869598 - 1872048 + | phenylalanyl-tRNA synthetase, beta subunit Lcho_1751 1872093 - 1872434 + | integration host factor, alpha subunit Lcho_1752 1872469 - 1872954 + | MerR family transcriptional regulator TERM 968 1873091 - 1873119 + T 79 -11 -3.89215 | opp_overlap 1873091 GACCATATGAATCAA CGGGTTAGCTCT CTCAA GGGGCTAGCCCG TTTGGCTTTGTGGGG TERM 969 1873437 - 1873477 + T 87 -4.5 -5.1356 | opp_overlap 1873447, overlap 1873441 1873441 1873443 CGACATGAGCCCCAG AAACGACAAAGCCCCGGCT TGT GGCCGGGGCTAAGTGCTTG TTTTTATTGGTGCCG TERM 970 1873441 - 1873474 + T 88 -9.5 -4.66002 | gap 1, opp_overlap 1873447, overlap 1873441 1873437 1873443 ATGAGCCCCAGAAAC G-ACAAAGCCCCGGCT TGT GGCCGGGGCTAAGTGC TTGTTTTTATTGGTG TERM 971 1873443 - 1873471 + T 71 -12.3 -3.23415 | opp_overlap 1873447, overlap 1873441 1873441 1873437 GAGCCCCAGAAACGA CAAAGCCCCGGCT TGT GGCCGGGGCTAAG TGCTTGTTTTTATTG TERM 972 1873467 - 1873447 - T 95 -15.4 -4.17701 | opp_overlap 1873443 1873441 1873441 1873437 CCCAGAAACGACAAA GCCCCGGC TTGTG GCCGGGGC TAAGTGCTTGTTTTT Lcho_1753 1876619 - 1873575 - | TPR repeat-containing protein Lcho_1754 1876862 - 1882291 + | large exoprotein involved in heme utilization or adhesion TERM 973 1882297 - 1882323 + F 72 -11.6 -3.52918 | opp_overlap 1882249, overlap 1882293 1882298 ACTGATCTGACGCCC GGGGGAAAACTG AAC CGGTTTTCCCCG TTGCTTTCCCGCTTG TERM 974 1882298 - 1882322 + F 75 -15.1 -2.71269 | overlap 1882297 1882293 CTGATCTGACGCCCG GGGGAAAACTG AAC CGGTTTTCCCC GTTGCTTTCCCGCTT TERM 975 1882338 - 1882362 + F 89 -17.1 -3.17825 | overlap 1882334 1882338 GTTGCTTTCCCGCTT GGGTGCCCGGC CTG GCCGGGCACCA TCTCTTCATCGTTTT TERM 976 1882824 - 1882854 + G 71 -8.8 -4.13282 | opp_overlap 1882804, overlap 1882825 1882835 GCGTGCTGCTGCGCG AGTTGCTGCGCCAC GCC GAGGCGCTGCAGCG TTTTCAGCGTGTGCT Lcho_1755 1882406 - 1884349 + | TPR repeat-containing protein Lcho_1756 1884429 - 1885187 + | hypothetical protein Lcho_1757 1885272 - 1886084 + | hypothetical protein TERM 977 1886988 - 1887024 + G 91 -17.3 -3.87815 | AATCGTCGGGCTCGT TTGCGCACCAGCTCGCG CAG CTCGAGGTGGTGCGCGA TTTCTCGACCTCGGC Lcho_1758 1886126 - 1888465 + | type I secretion system ATPase Lcho_1759 1888467 - 1890023 + | HlyD family type I secretion membrane fusion protein Lcho_1760 1891385 - 1890024 - | HlyD family type I secretion membrane fusion protein Lcho_1761 1893110 - 1891389 - | type I secretion system ATPase TERM 978 1893417 - 1893428 + H 93 -3.6 -5.42265 | opp_overlap 1893407 GCAAACCGTATATTG CGGG CAGT TCCG TTTTTTCTGATTTCA Lcho_1762 1893455 - 1894900 + | Outer membrane protein-like protein TERM 979 1894877 - 1894911 + T 73 -12 -3.33492 | overlap 1894879 TGGGTGGCGCCGGAG CTGGCGGTGGGTCAGC CGC GCTGAACCGCCGGCCG TTCTCGCGTCAGTGG Lcho_1763 1895945 - 1894920 - | inositol phosphatase/fructose-16-bisphosphatase Lcho_1764 1898663 - 1895970 - | aminopeptidase N Lcho_1765 1899366 - 1898656 - | HAD family hydrolase Lcho_1766 1900268 - 1899366 - | peptide chain release factor 2 TERM 980 1900622 - 1900598 - R 76 -13.6 -3.15544 | gap 1 GCGCACGGTGACGAA GCGGCC-GCCT CGGC AGGCCGGCCGC TCACGGCATCAGGAA Lcho_1767 1901642 - 1900623 - | alpha/beta hydrolase fold Lcho_1768 1903241 - 1901697 - | CheW protein Lcho_1769 1905339 - 1903261 - | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 981 1903444 - 1903468 + g 70 -9.9 -3.7732 | CGAGCCCTGGTTCAC GCGGCTCGACG ACT CGTCGATCAGC TTGTTGATCTCGCGC TERM 982 1905425 - 1905447 + r 75 -4.1 -4.67038 | gap 1, overlap 1905419 1905429 CGATCAGTAGCGCAT TGATGCCCTG TGTT CCGGGC-TCA TTTTCATTTTGGCGG Lcho_1770 1906242 - 1905451 - | hypothetical protein Lcho_1771 1906316 - 1907059 + | peptidase M50 Lcho_1772 1907422 - 1907078 - | hypothetical protein Lcho_1773 1909514 - 1907433 - | peptidase S8 and S53 subtilisin kexin sedolisin Lcho_1774 1910835 - 1909672 - | hypothetical protein TERM 983 1910121 - 1910071 - G 83 -8.1 -4.72986 | gap 1, overlap 1910081 1910082 CAGGGCGATGAAAAA GCGCTGGAAATCCTGCTGC-GCGC AGCC GCGCGGCAGCAGCCGCAGCAGCGC GGGCATGCGGGCGCT Lcho_1775 1911153 - 1912145 + | helix-turn-helix type 11 domain-containing protein TERM 984 1912877 - 1912920 + G 93 -22.4 -3.01712 | CGTCGCCGCGCTCGC GCAGGACGAGGCGCCGCAGC GACC GCTGCCGCGCCGCGTCGTGC TGTTCGGCCACAGCC TERM 985 1913844 - 1913902 + G 70 -13.2 -3.32844 | gap 3, opp_overlap 1913828, overlap 1913847 CGCGCCAGCCTCGAC CTG-GCCGCCTGCGGCG-AGGCC-AACAC CTGG GCGTTCGGCCTGCGCCGCATGCTGCTCGG TTATGCGGTCGGCGA TERM 986 1913847 - 1913898 + G 71 -15.9 -2.60079 | gap 2, opp_overlap 1913828, overlap 1913844 GCCAGCCTCGACCTG GCCGCCTGCGGCG-AGGCC-AACAC CTGG GCGTTCGGCCTGCGCCGCATGCTGC TCGGTTATGCGGTCG TERM 987 1914224 - 1914278 + G 82 -17.8 -3.14132 | gap 1, overlap 1914251 AGCCGTGCCGCTGGC GGTGCTGCGCGAGGCCTGGCTCGGC ACGGTC GACGAGCCCGGCCT-GCGCAGCCGC TTCCTGGCCGGCGGC Lcho_1776 1912149 - 1916033 + | exodeoxyribonuclease V, gamma subunit TERM 988 1918858 - 1918906 + G 70 -12.4 -3.30441 | gap 1, overlap 1918855 GCCGCCGCTGCACCT GCCGCCGGTCTTCCAG-GCCG AGTTCGAG CGGCGCTGGGCGATCGGCAGC TTCTCGGGGCTGGTG Lcho_1777 1916033 - 1919851 + | exodeoxyribonuclease V, beta subunit Lcho_1778 1919848 - 1922067 + | exodeoxyribonuclease V, alpha subunit Lcho_1779 1923276 - 1922098 - | extracellular ligand-binding receptor TERM 989 1923419 - 1923391 - R 100 -14.6 -5.64274 | gap 1 GCAGCCACAAAAAAA GCGGTGG-GACGC TTGC GCGCCACCACCGC CGGTGTCGATGCCCG TERM 990 1923428 - 1923467 + r 84 -12 -3.98627 | gap 1, overlap 1923429 1923432 1923445 CCACCGCCGGTGTCG ATGCCCGCGGC-GCCGCCG AAG CGGCTGCCGCTGCGGTCAC TTCTTCTCTTCGTCC TERM 991 1923429 - 1923466 + r 81 -15.5 -2.98453 | gap 1, overlap 1923428 1923432 1923445 CACCGCCGGTGTCGA TGCCCGCGGC-GCCGCCG AAG CGGCTGCCGCTGCGGTCA CTTCTTCTCTTCGTC TERM 992 1923432 - 1923463 + r 78 -15.8 -2.71335 | gap 1, overlap 1923429 1923428 1923445 CGCCGGTGTCGATGC CCGCGGC-GCCGCCG AAG CGGCTGCCGCTGCGG TCACTTCTTCTCTTC Lcho_1780 1925209 - 1923464 - | TRAP dicarboxylate transporter, DctM subunit Lcho_1781 1925799 - 1925206 - | tripartite ATP-independent periplasmic transporter DctQ Lcho_1782 1926608 - 1925964 - | two component LuxR family transcriptional regulator Lcho_1783 1928091 - 1926586 - | histidine kinase TERM 993 1927030 - 1927018 - G 80 -6.9 -4.72986 | opp_overlap 1927018 CAGGCGCATGAAAAA CGCCA GTT CGGCG TGTTCGGCGAACTCC Lcho_1784 1928457 - 1928107 - | hypothetical protein Lcho_1785 1928949 - 1928503 - | hypothetical protein TERM 994 1928812 - 1928838 + g 75 -14.4 -3.5002 | overlap 1928809 GGCGATCACCATCGC GTCGTCGAGCGT CAC GCGCTCGTCGAC TTCCTTCTGCTTGAG TERM 995 1929018 - 1928994 - R 100 -13.6 -4.63048 | gap 1 TCCAGAAACAACAAA GCCCGTCACGG CGTC CCGTG-CGGGC TAGGTAACACCGTCC Lcho_1786 1929291 - 1929079 - | ribosomal protein S21 Lcho_1787 1930722 - 1929502 - | hypothetical protein TERM 996 1929691 - 1929706 + g 72 -3.2 -4.57569 | GGTGTCGACGCCGCC GGCC ATCACCTC GGCC TTTTTCCAGCCCTCG TERM 997 1930699 - 1930677 - G 100 -9.1 -5.24129 | gap 1 CGCCCGCACAAAAAA GGCCGGCCGC ACCT GCG-CCGACC ACCACCACGTCGAAA Lcho_1788 1931634 - 1930780 - | periplasmic binding protein, putative Lcho_1789 1932181 - 1931702 - | cytochrome c550 TERM 998 1934378 - 1934412 + G 89 -22.8 -2.53876 | CTCGACTCGCGCGCC GCGGCCGCTGCGGCGG TCG CCGCCGAACCGGCCGC TGCGTTGCCGTCGGC Lcho_1790 1932491 - 1934752 + | Fis family GAF modulated sigma54 specific transcriptional regulator Lcho_1791 1935864 - 1934719 - | hypothetical protein TERM 999 1936665 - 1936700 + G 82 -14 -3.78934 | gap 1, opp_overlap 1936663 GTGGGCGAGACCATC GCGCTGGC-GGTGCTCG ATC TGGCCACCGGCCAGCGC TTCTTCTGCGCCAGC Lcho_1792 1936140 - 1936982 + | pyrroloquinoline quinone biosynthesis protein PqqB Lcho_1793 1936979 - 1937698 + | ABC transporter-related protein TERM 1000 1938342 - 1938352 + G 71 -8.2 -4.13767 | opp_overlap 1938332 1938333 ATCAAGGCCGGCAAG CGCC CGC GGCG TTTTGCCATGACACC Lcho_1794 1937757 - 1938773 + | YVTN beta-propeller repeat-containing protein TERM 1001 1939146 - 1939089 - g 89 -8.1 -5.03314 | gap 1, opp_overlap 1939070 1939069, overlap 1939090 CGCAGGCCGAAAAAA CCGGCG-CCGCCTTCGTGCTGACCGACC TCG GCCCGGCCGCCACGCTGGCCGCCGCCGA CGCGGTCAAGCTGCC Lcho_1795 1938773 - 1939948 + | hypothetical protein Lcho_1796 1939945 - 1940787 + | ABC-2 type transporter Lcho_1797 1940759 - 1941517 + | hypothetical protein Lcho_1798 1941517 - 1942119 + | hypothetical protein Lcho_1799 1942161 - 1942661 + | hypothetical protein TERM 1002 1942677 - 1942659 - f 81 -7.4 -4.57073 | CAGCTGCCTGAAAAA TGAACCGC GCC GCTGTTCA AGGATCCAACGATCG Lcho_1800 1942745 - 1943434 + | hypothetical protein TERM 1003 1943674 - 1943652 - g 71 -6.8 -4.18018 | overlap 1943653 CGTGCTGATCGAAAA CCGCGCCGGC GCC GGCGGCACGC TGGCCATGCCGGTGC Lcho_1801 1943425 - 1944420 + | hypothetical protein Lcho_1802 1944456 - 1945091 + | hypothetical protein Lcho_1803 1946004 - 1945120 - | hypothetical protein Lcho_1804 1946133 - 1947338 + | integrase family protein Lcho_1805 1948061 - 1947393 - | SCP-like extracellular TERM 1004 1948285 - 1948262 - H 75 -12.5 -3.53811 | GTGAGGTCGGCGAAA CGGTCGTGA AGTCGG TCACGACCG GGCTTGCGCGGCGTC Lcho_1806 1948427 - 1949269 + | hypothetical protein TERM 1005 1949276 - 1949313 + T 93 -17.8 -3.31792 | gap 1, overlap 1949279 GCCGTCTGACCGGGG GGT-GTCGCCCAGGCAG GGTGA CTGCCTGGGCGCCTACC TTGTCGACGTGATGA TERM 1006 1949279 - 1949309 + T 86 -18.3 -2.59748 | overlap 1949276 GTCTGACCGGGGGGT GTCGCCCAGGCAG GGTGA CTGCCTGGGCGCC TACCTTGTCGACGTG Lcho_1807 1953442 - 1949798 - | WD-40 repeat-containing protein TERM 1007 1951333 - 1951302 - G 79 -18 -2.78384 | gap 1 CCGCCGGTCACGACA CGC-GCGCCGCGGTC GTC GAACGCGGCGCTGCG CACCGAGGTGGCGTG TERM 1008 1952915 - 1952942 + g 79 -16.2 -3.32343 | opp_overlap 1952909 1952906 CACGAACGACAGCCG CGCCAGCGCCGG CTGC TCGGCGCGGGCG TTGTGCAGGTGTCGG Lcho_1808 1954937 - 1953435 - | TIR protein TERM 1009 1954440 - 1954402 - G 73 -9.5 -3.91897 | gap 1 CGCTCGATGTAGAAA GGTGACGCCGCCTCGAGC ACCT GCTCG-GGCAGCTCCAGC ACCGCGCGCGGGTTG Lcho_1809 1955915 - 1955046 - | peptidase M48 Ste24p TERM 1010 1955147 - 1955179 + g 82 -18.4 -3.21276 | opp_overlap 1955145, overlap 1955145 1955148 GGCTGCTCAGGAACT CGGGCGGCGCCGAG CCGCT CTTGGCGCCGCCCA TCTTCTGCCACAGGC TERM 1011 1955148 - 1955178 + g 89 -21.9 -2.52623 | opp_overlap 1955145, overlap 1955147 1955145 GCTGCTCAGGAACTC GGGCGGCGCCGAG CCGCT CTTGGCGCCGCCC ATCTTCTGCCACAGG Lcho_1810 1956097 - 1957194 + | hypothetical protein TERM 1012 1957216 - 1957247 + T 72 -13 -3.16742 | opp_overlap 1957219, overlap 1957219 CTGGGCGGGATGAAA AAAGCGGCGACAAC TTCC GTTGTCGCCGCTGA TTGCTGCGGATTCAG TERM 1013 1957244 - 1957219 - T 100 -19.1 -5.14563 | opp_overlap 1957216 1957219 GGCGGGATGAAAAAA GCGGCGACAAC TTCC GTTGTCGCCGC TGATTGCTGCGGATT TERM 1014 1957219 - 1957244 + T 90 -19.1 -2.78395 | opp_overlap 1957219, overlap 1957216 GGCGGGATGAAAAAA GCGGCGACAAC TTCC GTTGTCGCCGC TGATTGCTGCGGATT Lcho_1811 1959034 - 1957286 - | methanol/ethanol family PQQ-dependent dehydrogenase Lcho_1812 1960559 - 1959267 - | molybdenum cofactor synthesis domain-containing protein Lcho_1813 1960734 - 1961450 + | putative permease component of ABC transporter TERM 1015 1962078 - 1962099 + G 87 -6.5 -5.00616 | overlap 1962079 AGGCCGGCCACGTCG TGGTCGACC TGCC GGTCGAGCG TTTTTTCCACGACCC Lcho_1814 1961447 - 1962166 + | ABC transporter-related protein Lcho_1815 1962157 - 1963005 + | hypothetical protein TERM 1016 1963015 - 1963036 + F 75 -15.1 -2.72855 | overlap 1963000 1963032 CGCTGACTTTCCCTG GGCCGGGCT GCCC GGCCCGGCC TGATTCGGCCGTTTC Lcho_1816 1963237 - 1963710 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Lcho_1817 1963721 - 1965568 + | aldehyde ferredoxin oxidoreductase TERM 1017 1965601 - 1965624 + F 100 -13.2 -5.00616 | opp_overlap 1965601 1965604 GTTTGACTCGAATCA CAAGGCGGTT TTCG GACCGCCTTG TTTTTTGCACGGAAC TERM 1018 1965878 - 1965849 - g 70 -4.2 -4.33105 | gap 2 GAACCACTACGAAAA GCTCGGCATCACGC TCAA GCGCG--GCCGCGC CAGCAAGGTGGACAC Lcho_1818 1965646 - 1966926 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1019 1966942 - 1966958 + F 79 -10.8 -4.07885 | CGCAGTGGCCCTTGA CGCCCG CCGGT CGGGCG TTTTGAGCGAGCATC Lcho_1819 1966979 - 1967233 + | thiamineS protein TERM 1020 1967457 - 1967490 + G 74 -16.7 -2.51187 | overlap 1967456 TGGCGGTGAGCTACC GCTTCGAGGGCGTCG GCGA CGATGCCCGCGAGGC CTTCATGAAGTATTT Lcho_1820 1967234 - 1967536 + | hypothetical protein Lcho_1821 1967856 - 1967563 - | GYD family protein Lcho_1822 1968060 - 1969220 + | molybdate metabolism transcriptional regulator TERM 1021 1970652 - 1970704 + G 78 -18.3 -2.52896 | overlap 1970695 1970703 GCTGCACGCCAACGC GCCGGCGCGGCTGTGGATCGGCGAG CGG CTGGCCGATCCGTGGGCGCTCGGGC TCGATTCGCACGTGC TERM 1022 1970703 - 1970727 + G 74 -4.2 -4.58283 | gap 1, overlap 1970652 1970695 TCCGTGGGCGCTCGG GCTCGATTCGC ACGT GCGAG-CGCGC TTTTTCCAGCAGTTG Lcho_1823 1969408 - 1972617 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Lcho_1824 1973674 - 1972646 - | beta-lactamase domain-containing protein TERM 1023 1972750 - 1972765 + g 72 -11.8 -3.67564 | opp_overlap 1972750 CCCAGCCGCGATAGA GCGCCG GCAC CGGCGC TTTCAGTACCTCGTT Lcho_1825 1974516 - 1973671 - | hypothetical protein Lcho_1826 1976721 - 1974550 - | TonB-dependent receptor TERM 1024 1976133 - 1976117 - G 88 -10.1 -4.65895 | overlap 1976118 GCGGCGATCGAAAAA CCGCCGT CGA ACGGCGA CTCGACCGACACCCG TERM 1025 1976963 - 1976916 - R 100 -8.3 -5.14563 | gap 2, overlap 1976917 CCCGTGATGAAAAAA CCGGCGCGCCTGGACTGCTGGCG GTTC CGCCCGC-GTGCAGGC-CTCAGG CGCCGAGGATCCAGC Lcho_1827 1977798 - 1976959 - | hypothetical protein Lcho_1828 1978256 - 1977795 - | MarR family transcriptional regulator Lcho_1829 1978707 - 1978282 - | BLUF domain-containing protein Lcho_1830 1979474 - 1978722 - | GTP cyclohydrolase I TERM 1026 1979713 - 1979750 + H 81 -15.6 -3.01712 | GACGTTGATTTTTCC GCGTGCCGC-CCCCCTGC ATAC GCGGGGGGCGCGGCG-GC TGTTCCGACGGCGGG Lcho_1831 1979968 - 1980891 + | hypothetical protein TERM 1027 1980956 - 1980903 - f 82 -16 -3.07043 | gap 3, opp_overlap 1980904 GTGATCACCTGAACA CCCGGCATCGACGCA-CCC-GCGGCCG TGG CTGCCGCAGGGGCGCGCCG-TGCCGGT TCCTGAAAACCTCGG TERM 1028 1980904 - 1980955 + F 80 -15.1 -3.14564 | gap 3, opp_overlap 1980903 TGATCACCTGAACAC CCGGCATCGACGC-ACCC-GCGGCCG TGG CTGCCGCAGGGGCGCGCCG-TGCCGG TTCCTGAAAACCTCG Lcho_1832 1981014 - 1982738 + | general substrate transporter Lcho_1833 1982912 - 1984177 + | hypothetical protein Lcho_1834 1984417 - 1984208 - | heavy metal transport/detoxification protein Lcho_1835 1984590 - 1987004 + | heavy metal translocating P-type ATPase Lcho_1836 1987497 - 1987009 - | thioesterase superfamily protein TERM 1029 1987434 - 1987454 + g 72 -3.1 -4.51812 | overlap 1987435 GCTCGAACAGCTCGG TCAGCGTGG CCT CCAGGCGGG TTTGTTCTTCTGCGC Lcho_1837 1987536 - 1988312 + | hypothetical protein TERM 1030 1988334 - 1988351 + T 100 -14.1 -4.2803 | opp_overlap 1988334 CTCCACACGGCAAAA CGGGCGC CGAA GCGCCCG TTTTCCGTTCCGCTC TERM 1031 1988351 - 1988334 - T 93 -14.1 -4.16943 | opp_overlap 1988334 CTCCACACGGCAAAA CGGGCGC CGAA GCGCCCG TTTTCCGTTCCGCTC Lcho_1838 1989203 - 1988376 - | PpiC-type peptidyl-prolyl cis-trans isomerase Lcho_1839 1989640 - 1989335 - | BolA family protein Lcho_1840 1990275 - 1989637 - | intracellular septation protein A Lcho_1841 1990801 - 1990376 - | methionine-R-sulfoxide reductase TERM 1032 1990501 - 1990456 - G 71 -14.8 -3.01712 | gap 3 GGCCGTCGTCGAACA CGTGGCCGAGGTGGGC-GCC-GC ATT GCTGGCAGCGCACCTCGACC-CG CACCATGCCGTGGCT Lcho_1842 1992309 - 1990798 - | hypothetical protein Lcho_1843 1992437 - 1994107 + | AMP-dependent synthetase and ligase TERM 1033 1994805 - 1994824 + F 73 -13.6 -2.80784 | opp_overlap 1994803, overlap 1994809 CAGGTCAGAATTAGG CCAACGCG CCGT CGCGTTGG TGGTTGGTCCATTTA Lcho_1844 1994861 - 1995397 + | HNH endonuclease TERM 1034 1995494 - 1995483 - f 79 -5.8 -4.6902 | opp_overlap 1995481 1995483 CCATAACTGGAAAAA GGGA GAAT TCCC TGTTAGTCCATTTGT Lcho_1845 1996050 - 1996694 + | hypothetical protein Lcho_1846 1996897 - 1997424 + | GCN5-related N-acetyltransferase Lcho_1847 1997711 - 1998319 + | hypothetical protein Lcho_1848 1999597 - 1998368 - | lytic murein transglycosylase TERM 1035 1998562 - 1998539 - G 73 -13.8 -3.4052 | CTGCAACGCAAGCAA CTGGCTGCGC GTGA GCGCCGCCAG ATCACGCGGCCAGGG TERM 1036 2000054 - 2000034 - g 76 -3.1 -4.66609 | opp_overlap 2000045 GAGCGCATGGAAAAA GACTGGCCC GAG GTGCCGATC CACCTTTCGGTGCAG Lcho_1849 1999650 - 2001086 + | peptidase U32 Lcho_1850 2001092 - 2002123 + | inner-membrane translocator TERM 1037 2002912 - 2002928 + G 74 -2.1 -4.72272 | overlap 2002913 ATCTGCTGTTCGTCT TCCTGGG CGG CGCGGGG TTTTTCGTCGGCCCG Lcho_1851 2002116 - 2003414 + | inner-membrane translocator Lcho_1852 2003411 - 2004172 + | ABC transporter-related protein TERM 1038 2004505 - 2004467 - g 86 -14.5 -4.07568 | gap 1, opp_overlap 2004469, overlap 2004449 2004470 GCTGCTGGGCCAAAA GAGCGGCCG-CCAGCCGG GCCG CCGGCCGGGCGGCTGGTC GTTCGACGACGTGTA Lcho_1853 2004165 - 2004872 + | ABC transporter-related protein TERM 1039 2005177 - 2005165 - g 77 -4.8 -4.63218 | GGTGGTCGAAGAAAA GCTG CTGCT CAGC CAGGCGGTGCCCTCC Lcho_1854 2005049 - 2006032 + | transglutaminase domain-containing protein Lcho_1855 2006082 - 2006546 + | thioesterase superfamily protein Lcho_1856 2006578 - 2007045 + | GCN5-related N-acetyltransferase Lcho_1857 2008539 - 2007067 - | diguanylate cyclase Lcho_1858 2009888 - 2008665 - | hypothetical protein Lcho_1859 2011126 - 2009930 - | di-haem cytochrome c peroxidase Lcho_1860 2012781 - 2011141 - | hypothetical protein Lcho_1861 2013315 - 2012902 - | response regulator receiver domain-containing protein TERM 1040 2014031 - 2014061 + G 71 -9 -4.07687 | gap 1, overlap 2014032 TCATCGCGGCCTATG ACGGCGGT-GCCA CCGCGC TGGCGACCGCCGG TTTTGCCGACGCGCT TERM 1041 2014585 - 2014557 - g 73 -13.7 -3.35679 | overlap 2014542 GGTCTTCAGCGAGAA CCTGCGCGACCTG CTG CTGGCCGCGCCGG CCGGCAAGCGGGTGG TERM 1042 2015528 - 2015506 - g 81 -12.6 -3.87815 | opp_overlap 2015506 2015507, overlap 2015507 GCCGAGCTGGAGAAA CCCGGCCGCG ACC CGCGCCCGGA TTTCAAGGTGGCACG Lcho_1862 2013472 - 2015955 + | RNA-binding S1 domain-containing protein Lcho_1863 2016592 - 2015966 - | hypothetical protein Lcho_1864 2017572 - 2016874 - | PAP2 superfamily protein Lcho_1865 2019296 - 2017569 - | sulfatase Lcho_1866 2019392 - 2020051 + | two component transcriptional regulator TERM 1043 2020038 - 2020061 + F 76 -13.8 -3.05384 | TCGGCTACCGCATGG GCCAGCAGGC GTGA GCCGGCTGGC TTCGATCCGCCAGCG TERM 1044 2020699 - 2020734 + G 86 -14.6 -4.07568 | ATCGACGAGCTGGGC CACCGGCTGGCGCGCC GGCT GGCGCACGAGCGGGTG TTTTCGGCCCACGCC Lcho_1867 2020087 - 2021373 + | histidine kinase Lcho_1868 2021512 - 2022396 + | hypothetical protein TERM 1045 2022455 - 2022479 + G 87 -15.7 -3.60865 | CGCGTCGATGTACCT CGGCACCGGCG GCT CGCTGGTGCTG TTCTCGTTTCCGGTC Lcho_1869 2022393 - 2022890 + | hypothetical protein Lcho_1870 2022892 - 2023272 + | hypothetical protein TERM 1046 2023511 - 2023521 + G 71 -8.2 -4.08767 | overlap 2023487 CGCTGGCGCAGCCTG CCGG TCA CCGG TTTTGCCGCGCTGCG Lcho_1871 2023277 - 2024776 + | patatin TERM 1047 2025301 - 2025331 + G 72 -12.5 -3.56092 | gap 1 GACCCGCACCGCCTG GCG-GTCGGCGGCG ACAG CGCCGGCGGCACGC TTTCGGCGGTGGTCG Lcho_1872 2024827 - 2025792 + | alpha/beta hydrolase domain-containing protein TERM 1048 2026480 - 2026519 + G 81 -16.4 -3.5393 | gap 1 GCCATGTCGGCCGCG CCGTGCTCGACGCGCTGCT GGC GGCGGCGCG-CGAACGCGG TTTCCACGAGGTGGT Lcho_1873 2025789 - 2026649 + | thioesterase superfamily protein Lcho_1874 2027620 - 2026661 - | hypothetical protein Lcho_1875 2027975 - 2027625 - | hypothetical protein Lcho_1876 2028931 - 2027972 - | folate-binding protein YgfZ Lcho_1877 2029109 - 2030095 + | aminodeoxychorismate lyase TERM 1049 2030642 - 2030680 + G 84 -2.8 -5.09225 | overlap 2030644 CGAGCGCCGTGCCGC GGCACGTGCACCCGACCG CTT CGAGCGCGAGCAGGTGGC TTTTTTCCATGCCGT Lcho_1878 2030139 - 2030819 + | dTMP kinase Lcho_1879 2030813 - 2031895 + | DNA polymerase III, delta prime subunit TERM 1050 2031989 - 2031973 - g 75 -5.7 -4.56597 | opp_overlap 2031985, overlap 2031975 GTCTTTCGCGAAAAA GGCGCGC TCT ACGCGGC CTACATCCCGCTGTT Lcho_1880 2031892 - 2032272 + | type IV pilus assembly PilZ Lcho_1881 2032379 - 2033155 + | TatD family hydrolase TERM 1051 2033173 - 2033198 + F 91 -8.4 -4.7416 | gap 1, overlap 2033168 2033167 2033176 CGGTGGCCCCCTGAC CGCGTGTCAGA TATCT TCTGACAC-CG TTTTTCGCATTTTCA Lcho_1882 2033296 - 2033526 + | hypothetical protein Lcho_1883 2033543 - 2034079 + | peptide deformylase Lcho_1884 2035001 - 2034084 - | band 7 protein Lcho_1885 2035479 - 2035048 - | hypothetical protein Lcho_1886 2035612 - 2037867 + | lysine decarboxylase Lcho_1887 2038039 - 2040315 + | glycogen debranching enzyme GlgX TERM 1052 2041984 - 2041930 - g 70 -10 -3.73775 | gap 3, overlap 2041931 2041934 TCGAGCGCTACGAAA GCGATC--CGG-CCCTGCACGACCTGC CGCC GCAGGACGCGCTGGGCCCGCTGATCGA CCTGGCCGAGCAGAT TERM 1053 2041977 - 2041934 - g 71 -15.8 -2.67803 | overlap 2041931 2041930 GCGCTACGAAAGCGA TCCGGCCCTGCACGACCTGC CGCC GCAGGACGCGCTGGGCCCGC TGATCGACCTGGCCG Lcho_1888 2040417 - 2042051 + | phosphoglucomutase/phosphomannomutase alpha/beta/subunit TERM 1054 2043347 - 2043324 - g 71 -6.7 -4.18018 | CTTCCGCACCGAAAA CGGCGTG GTGCTGGTGA CACGCCG CATGCTCGCCGCGCT Lcho_1889 2042098 - 2043366 + | glucose-1-phosphate adenylyltransferase Lcho_1890 2043435 - 2044898 + | glycogen/starch synthase, ADP-glucose type Lcho_1891 2044959 - 2047487 + | glycogen/starch/alpha-glucan phosphorylase Lcho_1892 2049000 - 2047534 - | von Willebrand factor type A (vWA) domain-containing protein Lcho_1893 2050409 - 2049015 - | ATPase Lcho_1894 2051887 - 2050472 - | histidine kinase Lcho_1895 2052641 - 2051907 - | two component transcriptional regulator TERM 1055 2052681 - 2052692 + H 82 -7.2 -4.60255 | overlap 2052681 ACACGATTGTGCGCA CGGC CGAA GCCG TTTTTCGCCCGTTCT Lcho_1896 2052896 - 2053570 + | hypothetical protein Lcho_1897 2054362 - 2053592 - | 3-hydroxybutyrate dehydrogenase Lcho_1898 2054436 - 2055338 + | alpha/beta hydrolase fold TERM 1056 2056053 - 2056041 - g 80 -6.2 -4.72272 | CTGCTCGATGAAAAA CGCG TCGAG CGCG AGACCGGCATCGAGC Lcho_1899 2055348 - 2057624 + | (p)ppGpp synthetase I, SpoT/RelA TERM 1057 2057783 - 2057809 + F 100 -18.8 -4.62069 | opp_overlap 2057770 2057783 AATGGTAGGCATCAA GCCCGGCAGATC TCA GATCTGTCGGGC TTTTTCGCATCCGCA TERM 1058 2057809 - 2057783 - f 89 -16.6 -3.1876 | opp_overlap 2057783, overlap 2057770 AATGGTAGGCATCAA GCCCGGCAGATC TCA GATCTGTCGGGC TTTTTCGCATCCGCA Lcho_1900 2057905 - 2058492 + | polyhydroxyalkonate synthesis repressor, PhaR Lcho_1901 2059193 - 2058549 - | GDSL family lipase TERM 1059 2059498 - 2059524 + G 73 -13.6 -3.36273 | opp_overlap 2059489 GATGAAGACGCCCGC GCCGCCGTGCGC GGC GAGCACGTCGGC TTCGTGTTCCAGAGC Lcho_1902 2059237 - 2059938 + | ABC transporter-related protein Lcho_1903 2059959 - 2060693 + | RNA methyltransferase TERM 1060 2060707 - 2060673 - f 85 -16.5 -3.14132 | gap 1, opp_overlap 2060697, overlap 2060694 GTGTGCCTCTACGAA GCCCTGCGGCAGCGCC AATG AGC-CTGCCGCAGAGC CGGCATCCGTTGCGG Lcho_1904 2060690 - 2061466 + | silent information regulator protein Sir2 TERM 1061 2061897 - 2061875 - g 85 -13.5 -4.11216 | opp_overlap 2061868 2061867 GTGCTACTGCGAAAA GCTCGTCGA CCACC TCGACGAGC GCATCGCGTTGATCA Lcho_1905 2061528 - 2062154 + | uracil phosphoribosyltransferase Lcho_1906 2062185 - 2062559 + | hypothetical protein Lcho_1907 2063615 - 2062581 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 1062 2065338 - 2065280 - g 71 -14.6 -3.11192 | CACATCACCAGCGAA TGGATGGCGCCGTACCGCCAGCAGC-GC ATCGA ACAGCTGCTGGCCGGGCGGC-CCACCCA CGATGTCGAAAGCTT Lcho_1908 2063672 - 2066128 + | peptidase S45 penicillin amidase Lcho_1909 2066357 - 2067226 + | nicotinate-nucleotide pyrophosphorylase Lcho_1910 2067346 - 2067777 + | type IV pilus assembly PilZ TERM 1063 2068376 - 2068412 + G 100 -12.9 -5.03314 | opp_overlap 2068376 2068378 GGAAGTGCTGGAACA GATGCTCGCGCCGGCCA GCC TGGCCGGGGTGCACATC TTTTTTCCCGATCCC TERM 1064 2068454 - 2068442 - g 84 -2.6 -5.18726 | overlap 2068448 CTGGCACAAGAAAAA GCAC AACAA GCGC CGACTCATCCAGGCG Lcho_1911 2068080 - 2068715 + | tRNA (guanine-N(7)-)-methyltransferase Lcho_1912 2069535 - 2068723 - | undecaprenol kinase TERM 1065 2069584 - 2069602 + H 72 -13.1 -3.09878 | opp_overlap 2069584 TTCAGACAAGAAAAA GCCCCGC CACGT GCGGGGC TGTTCGATCGATCGG TERM 1066 2069602 - 2069584 - H 100 -13.1 -5.24796 | opp_overlap 2069584 TTCAGACAAGAAAAA GCCCCGC CACGT GCGGGGC TGTTCGATCGATCGG Lcho_1913 2069677 - 2070927 + | RNA-binding S4 domain-containing protein Lcho_1914 2071017 - 2071655 + | TetR family transcriptional regulator Lcho_1915 2075769 - 2071687 - | phosphoribosylformylglycinamidine synthase Lcho_1916 2076942 - 2075827 - | FAD dependent oxidoreductase TERM 1067 2076150 - 2076190 + g 81 -18.1 -3.04322 | GGCCGAAGCGCATCT GGCCGGCCAGGTCGAGCGT GAC GTGCACGCCCAGGCCGGCC TGTTCCGGGATTGGA Lcho_1917 2077034 - 2077837 + | methionine aminopeptidase, type I Lcho_1918 2077934 - 2080588 + | UTP-GlnB uridylyltransferase, GlnD Lcho_1919 2082060 - 2080564 - | RNA methyltransferase Lcho_1920 2083063 - 2082116 - | peptidase M23B Lcho_1921 2083976 - 2083125 - | protein-L-isoaspartate O-methyltransferase Lcho_1922 2084734 - 2083973 - | stationary-phase survival protein SurE Lcho_1923 2084994 - 2085740 + | two component LuxR family transcriptional regulator TERM 1068 2085770 - 2085791 + T 79 -5.8 -4.66833 | gap 1, opp_overlap 2085761 GAGAAACAGGCGGGG CGCG-CGGC AGGAC GCCGATGCG TTTTTCGCATTCCGG Lcho_1924 2086396 - 2085968 - | UspA domain-containing protein TERM 1069 2088174 - 2088145 - g 70 -14.3 -3.14132 | gap 1 CTGGCGCCCGAGCAA CTGCAGCCGACGCG CAC CGCGTCGGC-GCAC GGTGCCTGAGCCGGG Lcho_1925 2086624 - 2088183 + | glutamate--cysteine ligase Lcho_1926 2088957 - 2088190 - | ABC-2 type transporter Lcho_1927 2089880 - 2088954 - | ABC transporter-related protein TERM 1070 2090006 - 2089980 - R 100 -13.7 -5.8096 | opp_overlap 2089980 GAGAAAAAAGAAAAA GGCCTCCAGGC TATTT GCTTGGAGGCC TTTATTTTGTCTGGG TERM 1071 2089980 - 2090006 + r 100 -15.9 -4.83243 | opp_overlap 2089980 GAGAAAAAAGAAAAA GGCCTCCAGGC TATTT GCTTGGAGGCC TTTATTTTGTCTGGG Lcho_1928 2092069 - 2090156 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1072 2090923 - 2090944 + g 75 -5.1 -4.56597 | gap 1 CGGCCTCGAGTTCGC CGCGCACGTT GGC AAAG-GCGCG TTTTTCACCACCGCG TERM 1073 2091270 - 2091293 + g 72 -6 -4.32034 | gap 1, overlap 2091262 2091259 CGGGCACGCCGTTCC TGCGGC-TGTT CGT AGCGCGCCGCA TTTTCGTCGTAGTAC TERM 1074 2092158 - 2092141 - R 81 -11.3 -4.04318 | opp_overlap 2092141 GCCAGACACGACAAA GGCGAAC CAAT GTTCGCC TTGTTTGCGTCGCGC TERM 1075 2092141 - 2092158 + r 81 -11.3 -3.96216 | opp_overlap 2092141 GCCAGACACGACAAA GGCGAAC CAAT GTTCGCC TTGTTTGCGTCGCGC Lcho_1929 2092675 - 2092325 - | histone family protein DNA-binding protein Lcho_1930 2093794 - 2092841 - | hypothetical protein Lcho_1931 2094364 - 2093798 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Lcho_1932 2096517 - 2094439 - | excinuclease ABC, C subunit Lcho_1933 2096550 - 2097767 + | hypothetical protein Lcho_1934 2097917 - 2098471 + | translation elongation factor P TERM 1076 2098521 - 2098540 + T 100 -12.1 -4.72272 | opp_overlap 2098518 2098517 2098520 GCCGACATGAACCAG GGGCGCC CCGCGA GGCGCCC TTTTTCATGCCCGCA Lcho_1935 2099281 - 2098568 - | hypothetical protein TERM 1077 2099109 - 2099147 + g 73 -11.1 -3.7282 | gap 2 GGCGGCGCCGGATCC GCCGGTCGAGGCTGGTCCA CGA TCG-CCA-CCTCGATCGGC TTCTTGATCACCTCG Lcho_1936 2099727 - 2099299 - | biopolymer transport protein ExbD/TolR Lcho_1937 2100159 - 2099740 - | biopolymer transport protein ExbD/TolR Lcho_1938 2100972 - 2100181 - | MotA/TolQ/ExbB proton channel Lcho_1939 2103622 - 2101058 - | TonB-dependent receptor TERM 1078 2102766 - 2102750 - G 75 -5.1 -4.59773 | overlap 2102751 2102752 CTCGAGCGGGAAAAA TGCGC TGCCGGC GCGCA TGCAGTGGTACGCGG TERM 1079 2103945 - 2103922 - R 100 -16 -5.86976 | opp_overlap 2103922 GCAGAAAACAAAAAA GCGACCCGGC TGCT GCCGGATCGC TTTGATGTCTTGGTG TERM 1080 2103922 - 2103945 + r 88 -13.8 -3.94333 | opp_overlap 2103922 GCAGAAAACAAAAAA GCGACCCGGC TGCT GCCGGATCGC TTTGATGTCTTGGTG TERM 1081 2104072 - 2104084 + r 75 -3.4 -4.78753 | opp_overlap 2104072 2104063, overlap 2104063 2104075 AACCAACAAGAGAAA CTTG CAAGA CAAG TTTTCTTGCTCTTAA Lcho_1940 2105224 - 2104436 - | UBA/THIF-type NAD/FAD binding protein Lcho_1941 2106336 - 2105221 - | protein of unknown function DUF395 YeeE/YedE TERM 1082 2106310 - 2106286 - G 95 -12.1 -4.65933 | overlap 2106288 CAGCGCCAAAAGAAA CACGGCCCAGA GTA CCTGGGCCGTC AGATTCGATGCCTCG TERM 1083 2106308 - 2106288 - G 86 -14.7 -3.93868 | overlap 2106286 GCGCCAAAAGAAACA CGGCCCAGA GTA CCTGGGCCG TCAGATTCGATGCCT Lcho_1942 2107239 - 2106388 - | tol-pal system protein YbgF Lcho_1943 2107829 - 2107239 - | peptidoglycan-associated lipoprotein Lcho_1944 2109172 - 2107889 - | beta-propeller repeat-containing to-pal system protein TolB TERM 1084 2108586 - 2108615 + g 74 -9.9 -4.11216 | gap 1, opp_overlap 2108584, overlap 2108587 GCCGGCGAGATGATC GGCTCGGGCCCGCC GAC GGCGG-CCTGGGCG TTTTCGCCGTCGGCG Lcho_1945 2109422 - 2110012 + | uncharacterized peroxidase-related enzyme Lcho_1946 2111525 - 2110044 - | ribonuclease TERM 1085 2110128 - 2110144 + g 74 -7.9 -4.24342 | opp_overlap 2110119 GATGAAGTCGGAGAG GCCGGCG ATG TGCTGGC TTTCTTCGTCGAGCA Lcho_1947 2112141 - 2111533 - | maf protein Lcho_1948 2112634 - 2112164 - | hypothetical protein Lcho_1949 2113407 - 2112655 - | iojap-like protein TERM 1086 2112868 - 2112910 + g 95 -19 -3.61398 | overlap 2112901 AGCGGGCGCCTTCTT GGCCGCAACCGTCGTCCCGG CGG CCGGCTTGGCGGTCGCGGCC TTCTTCGCCACGGCC Lcho_1950 2114117 - 2113479 - | nicotinate (nicotinamide) nucleotide adenylyltransferase Lcho_1951 2115057 - 2114110 - | coproporphyrinogen oxidase Lcho_1952 2116356 - 2115073 - | phosphoribosylamine--glycine ligase Lcho_1953 2117142 - 2116417 - | hypothetical protein Lcho_1954 2117347 - 2118924 + | protein of unknown function DUF853 NPT hydrolase putative Lcho_1955 2118936 - 2119424 + | hypothetical protein Lcho_1956 2119544 - 2121403 + | glutaminyl-tRNA synthetase Lcho_1957 2122066 - 2121425 - | hypothetical protein Lcho_1958 2122706 - 2122248 - | glyoxalase/bleomycin resistance protein/dioxygenase Lcho_1959 2124302 - 2123271 - | hypothetical protein Lcho_1960 2125855 - 2124287 - | hypothetical protein TERM 1087 2124356 - 2124378 + g 95 -3.3 -5.26119 | overlap 2124361 AGCTCCCTTCTTCTC CAGCAGCTG GAATG CAGCTTCGG TTTTGTTTTTCAGCA Lcho_1961 2127084 - 2126197 - | integrase catalytic region Lcho_1962 2127380 - 2127081 - | transposase IS3/IS911 family protein TERM 1088 2127951 - 2127941 - g 95 -3.2 -5.42862 | overlap 2127942 ACATCTCGAAAAAAA TGAC GAT GCCA TCCGTACACTGATCA TERM 1089 2128471 - 2128483 + G 72 -5.5 -4.41348 | overlap 2128467 CCTCAAAGAGTGCCG TTGCC AAG GGCGA TTTCTTTGAAGCGGG Lcho_1963 2127516 - 2130053 + | hypothetical protein Lcho_1964 2131102 - 2130734 - | hypothetical protein TERM 1090 2130926 - 2130902 - G 71 -7 -4.2828 | TTCGACCCACGAAAA GGCCACCGTC TCCTC GGCCGTGGCC TGGACGGCGCGGCTG Lcho_1965 2132011 - 2131379 - | hypothetical protein Lcho_1966 2133288 - 2132014 - | hypothetical protein Lcho_1967 2133392 - 2133285 - | hypothetical protein Lcho_1968 2136777 - 2133700 - | acriflavin resistance protein Lcho_1969 2138050 - 2136794 - | RND family efflux transporter MFP subunit TERM 1091 2137939 - 2137976 + g 73 -14.1 -3.29144 | gap 1, opp_overlap 2137911, overlap 2137943 CCGGCCCACCCGCCG CTGCCTCGCCGGCGACGG GAC TCGT-GCCGGCGGGTCGG TTCTGCACCCAATAG Lcho_1970 2138641 - 2138159 - | ribonuclease H Lcho_1971 2139528 - 2138707 - | hypothetical protein TERM 1092 2140213 - 2140270 + G 72 -13.4 -3.54424 | gap 3 GCGCAGCCACGAGGC CGCCGTCATCGAGACG-GCGCG-CGAGCG TGG CGC-CGATGCGCACGACCCGGTGGCGGTG TTTGCCGCCATCAGA Lcho_1972 2139572 - 2140309 + | hydroxyacylglutathione hydrolase TERM 1093 2140563 - 2140509 - g 73 -13.5 -3.31144 | gap 2, overlap 2140472 2140510 GCTGGACGGCCAGAA CGCGCCGGTCGCCAGCGCCGCCGCACC CGG GGC-CGGCGACG-TCGCCACCAGCCCG CAACCGGCCGCGACC Lcho_1973 2140306 - 2142042 + | lytic transglycosylase catalytic TERM 1094 2142087 - 2142057 - T 93 -18.3 -3.38088 | opp_overlap 2142065 AATCGACTGAAGCAA CCGAAGCCGCCGC GGCAT GCGGCTGCTTCGG CGGGCCGCTTCAGCG Lcho_1974 2142693 - 2142097 - | recombination protein RecR TERM 1095 2142650 - 2142687 + g 76 -12 -3.79747 | GGCAATCGGCGCAGC GCCTCGACCAGGTG-CGC CAGG GCGTCGCC-GGACGAGGC TTTCATCGTGAGTCC Lcho_1975 2143048 - 2142722 - | hypothetical protein Lcho_1976 2145088 - 2143136 - | DNA polymerase III, subunits gamma and tau TERM 1096 2143830 - 2143865 + g 73 -14.6 -3.14132 | overlap 2143832 GGGCGGACCGGTGGG GCCGACGGTGCCTGCG CCAC CGATGGCACCGTCGTC TTGCTGACGGCGCCG TERM 1097 2143832 - 2143863 + g 75 -15.8 -3.13403 | overlap 2143830 GCGGACCGGTGGGGC CGACGGTGCCTGCG CCAC CGATGGCACCGTCG TCTTGCTGACGGCGC Lcho_1977 2145157 - 2146275 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 1098 2147009 - 2147020 + G 70 -2.2 -4.51097 | GTCGATCTGCCCGCC CCGA AGGA TTGG TTTTATGATCCTTCG Lcho_1978 2146319 - 2147089 + | leucyltransferase TERM 1099 2147459 - 2147445 - g 70 -12.8 -3.40403 | CCTGCGCTACCAGAA CCGGCG CCA CGCCGG GGGCGGCATGGACGA Lcho_1979 2147086 - 2147829 + | arginyltransferase Lcho_1980 2148247 - 2147864 - | hypothetical protein Lcho_1981 2148376 - 2149137 + | short-chain dehydrogenase/reductase SDR Lcho_1982 2150349 - 2149165 - | hypothetical protein TERM 1100 2150422 - 2150459 + r 71 -10.6 -3.67517 | gap 1, opp_overlap 2150419 2150433 2150434, overlap 2150454 AGGCCAAATCCATGC CACCAGGCAAACCGGCC GGACG GGCCGATTT-CCAGGTG TTTACCCTGTTGCTG TERM 1101 2150696 - 2150683 - R 100 -8.1 -5.47218 | opp_overlap 2150683 CTCGATCGAAAAAAA GGACC CGAA GGTCC TTTCCTGATTCACGC TERM 1102 2150719 - 2150737 + r 72 -13.1 -3.07935 | overlap 2150720 ATTCACGCGAACCTG CCCCGGC TCGGC GCCGGGG TTGCATCAATGCAAT Lcho_1983 2151381 - 2150743 - | 3-oxoacid CoA-transferase, B subunit Lcho_1984 2152117 - 2151416 - | 3-oxoacid CoA-transferase, A subunit TERM 1103 2151806 - 2151767 - G 91 -17.8 -3.61398 | gap 1, opp_overlap 2151763 2151770 2151776 GGTCTTGGTGAAGAA GGCCGGGATGCCG-GCGCC GCC GGCGCGCAGCTTCTCGGCC AGCGTGCCTTGCGGC Lcho_1985 2152240 - 2152797 + | LuxR family transcriptional regulator Lcho_1986 2153717 - 2152818 - | hypothetical protein Lcho_1987 2153887 - 2154354 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein Lcho_1988 2154357 - 2156549 + | isoquinoline 1-oxidoreductase TERM 1104 2156607 - 2156570 - T 81 -16.9 -2.70932 | opp_overlap 2156573 CCCGCGCCTGAATGA GCCGAGGCCGGCGCACC GTGG GGTGCGCCGGCCTCTTT CACGTCAGGTCGTCA TERM 1105 2156573 - 2156604 + T 100 -27.4 -3.60627 | opp_overlap 2156570 GCGCCTGAATGAGCC GAGGCCGGCGCACC GTGG GGTGCGCCGGCCTC TTTCACGTCAGGTCG Lcho_1989 2157610 - 2156612 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Lcho_1990 2159051 - 2157636 - | hypothetical protein Lcho_1991 2160109 - 2159153 - | histone deacetylase superfamily protein Lcho_1992 2160284 - 2160847 + | phasin family protein Lcho_1993 2161680 - 2160937 - | hypothetical protein TERM 1106 2161027 - 2161044 + g 100 -10.5 -5.90981 | opp_overlap 2161027 CCAGGTACCTTCAAA CCCGGCT GTCA GGCCGGG TTTTTTTTCGTCTGC TERM 1107 2161661 - 2161627 - G 72 -16.5 -2.78384 | CGCCGTGCGAGCACA GCGGCGCCAC-GCCGGC CCG GCCGGCTGTG-CGCCAC GCCATTCAGAACCTT Lcho_1994 2161860 - 2162345 + | hypothetical protein Lcho_1995 2162359 - 2162952 + | electron transport protein SCO1/SenC Lcho_1996 2163035 - 2163499 + | hypothetical protein Lcho_1997 2164266 - 2163565 - | CRP/FNR family transcriptional regulator Lcho_1998 2164786 - 2164406 - | hypothetical protein TERM 1108 2165836 - 2165780 - g 76 -12.2 -3.74872 | gap 2, opp_overlap 2165834 2165835, overlap 2165781 ATGGAGCGCAGGAAA GCCGCGCCGGCTGCGGCTCAGGCGGCCT CTC AGGCCGGCTGATCGGC-GCCGA-GCAGG TAGTCGATCTTGCCC TERM 1109 2165835 - 2165781 - g 73 -15.7 -2.84602 | gap 2, opp_overlap 2165834, overlap 2165780 TGGAGCGCAGGAAAG CCGCGCCGGCTGCGGCTCAGGCGGCCT CTC AGGCCGGCTGATCGGC-GCCGA-GCAG GTAGTCGATCTTGCC Lcho_1999 2164913 - 2165821 + | hypothetical protein Lcho_2000 2166330 - 2165809 - | hypothetical protein Lcho_2001 2168985 - 2166358 - | alanyl-tRNA synthetase TERM 1110 2167200 - 2167228 + g 75 -14.5 -3.41051 | opp_overlap 2167226 GGGCGAAGTCGAAGC GGGTGCGCTCGGC GTT GACGAGCGAACCC TTCTGCTGCACATGC TERM 1111 2169397 - 2169409 + G 80 -6.2 -4.72272 | GACGCCGGGCGATTT CGCC AAGAA GGCG TTTTTCCTGAGCAGC Lcho_2002 2169080 - 2170384 + | 4-aminobutyrate aminotransferase Lcho_2003 2170440 - 2171930 + | succinic semialdehyde dehydrogenase TERM 1112 2171940 - 2171970 + T 72 -13.3 -3.05384 | gap 1 CGCTGAAGGCCGTGG CGACGACCG-GGCG CCCG CGCCTCAGTCGTCG TTGGCTGCGCCGCCC Lcho_2004 2172875 - 2171961 - | diguanylate cyclase TERM 1113 2173070 - 2173097 + H 72 -9 -4.08216 | opp_overlap 2173061 2173060, overlap 2173061 2173071 ACGAAGTGTGGCGCT CCCGCCTCATCC TTTA GGGGGAGGCGGA TTTTCACGCACCTCA Lcho_2005 2173150 - 2173611 + | hypothetical protein TERM 1114 2174865 - 2174835 - g 70 -13.3 -3.31792 | overlap 2174853 GCAGCAGCTCGAGAA GATCCGCAGCCAG AAGAA CCGGCTGCTGATC GTGGCCGAAAGCGCC Lcho_2006 2173723 - 2177190 + | transcription-repair coupling factor TERM 1115 2177526 - 2177495 - g 74 -9.5 -4.02108 | gap 3, opp_overlap 2177502 CCGACTACAAGGAAA GCCTGCGCCAGC-GCG TGG CGCTGCTGGC-C-GGC GTGCCGGTGGCGGCG Lcho_2007 2177284 - 2177991 + | phosphoserine phosphatase SerB Lcho_2008 2178891 - 2178025 - | putative signal transduction protein TERM 1116 2178295 - 2178340 + g 73 -13.9 -3.31461 | gap 1, overlap 2178294 GACGCCCCAGCTGTG CG-CCAGCGCCGCGCCGACCAC CGC GTGATCGGTGCCGTGCCGGGCG TTCTCGACCTCGGTG Lcho_2009 2179519 - 2179016 - | regulator of ribonuclease activity A Lcho_2010 2181500 - 2179551 - | protein-disulfide reductase Lcho_2011 2182042 - 2181518 - | redoxin domain-containing protein Lcho_2012 2183342 - 2182077 - | major facilitator transporter TERM 1117 2182191 - 2182158 - G 70 -13.9 -3.18582 | gap 1, overlap 2182181 GACCGCAGCGAGCAA GGCGAGCGCCGATCCT TCG AAGATCGCCGC-CGCC TGGCCGGCATCGAGC TERM 1118 2183008 - 2182980 - G 72 -12.4 -3.53012 | gap 1 GTCGGCCGGGTGAAA CGGCGCATTGCCG AGCC CGGCCA-GCGCCG ACGCCGCCATCAGTC TERM 1119 2183815 - 2183774 - g 75 -12.9 -3.62775 | opp_overlap 2183788, overlap 2183776 AGCACGCGTGAAGAA CACGGCGCCGACCAGCGTG TCAT CACGCTGTTCGACCCGGCG CAGATGTGGGCGGTG TERM 1120 2183812 - 2183776 - g 75 -15.2 -3.39288 | gap 1, opp_overlap 2183788, overlap 2183774 CACGCGTGAAGAACA CGGCGCCGACCAGCGTG TCAT CACGCTGTTCGAC-CCG GCGCAGATGTGGGCG Lcho_2013 2183558 - 2184949 + | hypothetical protein TERM 1121 2185598 - 2185567 - g 73 -9.4 -3.91897 | gap 1, opp_overlap 2185555 TCGCCCACCGACAAA CCCAGCCGGGCACAG CGT CTGCGCC-GCCTGAG CTGGCCGGCGGGTTT Lcho_2014 2184991 - 2186259 + | hypothetical protein Lcho_2015 2186357 - 2187475 + | quinolinate synthetase complex, A subunit Lcho_2016 2187562 - 2187846 + | hypothetical protein Lcho_2017 2189479 - 2187854 - | L-aspartate oxidase TERM 1122 2187932 - 2187957 + g 70 -9.7 -3.73224 | gap 1 CAGCGTGTCCGGGAA GTCGC-GGCTGT AAT GCAGCCCGCGGC TTTCATGCCGCATCA TERM 1123 2188220 - 2188242 + g 87 -16.2 -3.64703 | CACCTGGCTTTCGTC CCAGGCCGGC AGT GCCGGCCGGG TTTCGGTGCCACGCG TERM 1124 2188946 - 2188964 + g 70 -13.8 -3.25823 | opp_overlap 2188944 2188946 ATAGATGCCATAACA GCGCGGCG CCT CGTCGCGC TTGATCTGGCGCGAG TERM 1125 2189844 - 2189862 + G 70 -2.5 -4.49556 | gap 1, overlap 2189847 CGGCCGCGCGGTGGG CAA-TCAC ATCC GTGAGTTG TTTGTTTCCTGCGAA Lcho_2018 2189668 - 2190909 + | hypothetical protein TERM 1126 2190964 - 2190930 - T 81 -13.5 -3.60792 | GGCTCAAGCCCGAAA CGAGACCGGGGCAGC CTCTC GCCACCCCGGCTTCG CAACGTCAGTGCACC Lcho_2019 2193567 - 2190970 - | ATP-dependent chaperone ClpB TERM 1127 2193027 - 2193077 + g 70 -12.5 -3.41738 | gap 1, overlap 2193055 2193057 TCTCGTCGTCGCGGC CGATC-ACCGGGTCGAGCTTGCCC ATGC GGGCGCGCTCGGTCAGGTCGAGCG TGTATTTCTTGAGCG Lcho_2020 2194177 - 2193698 - | molybdopterin biosynthesis MoaE protein Lcho_2021 2194439 - 2194188 - | molybdopterin converting factor, subunit 1 TERM 1128 2194227 - 2194215 - G 77 -6.9 -4.57073 | opp_overlap 2194196 CACGGGCGGGAAAAA CGCCA GCT CGGCG CCGTCTGTCAACTCG Lcho_2022 2195766 - 2194456 - | molybdenum cofactor synthesis domain-containing protein Lcho_2023 2196280 - 2195735 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 1129 2195938 - 2195909 - GR 74 -12.7 -3.28712 | opp_overlap 2195905 2195924, overlap 2195888 GCCGGCGGCGTACAA GGCCGGGGCGCCG TGCG CGGCGCGCCAGAC CTCGATCTTGGGCAG Lcho_2024 2197736 - 2196318 - | threonine synthase Lcho_2025 2199082 - 2197766 - | homoserine dehydrogenase TERM 1130 2199160 - 2199133 - R 81 -7.6 -4.49389 | gap 1, overlap 2199135 2199136 AGGGGAGAAGGAAAA GAGCGAC-GCGCC TCA GGCGCTGTGGCGC TTGCGGTAGTGGTCG Lcho_2026 2200374 - 2199145 - | aminotransferase class I and II Lcho_2027 2200527 - 2200898 + | hypothetical protein Lcho_2028 2200996 - 2201472 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1131 2201574 - 2201595 + F 100 -10.1 -5.75538 | opp_overlap 2201574 GCATGAATCCAAAAA GCCGAACAG CTTG CTGTCCGGC TTTTTCTTTTTTGGC TERM 1132 2201595 - 2201574 - f 100 -12.3 -4.7629 | opp_overlap 2201574 GCATGAATCCAAAAA GCCGAACAG CTTG CTGTCCGGC TTTTTCTTTTTTGGC Lcho_2029 2201667 - 2203388 + | PhoH family protein TERM 1133 2203425 - 2203447 + T 100 -18.4 -4.8622 | opp_overlap 2203422 TCGGGCAGATCACGA CGGGTCCGGC CAA GCCGGGCCCG TTTTTCATTCAGGGC Lcho_2030 2205384 - 2203456 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Lcho_2031 2206859 - 2205381 - | binding-protein-dependent transport systems inner membrane component Lcho_2032 2207918 - 2206935 - | binding-protein-dependent transport systems inner membrane component Lcho_2033 2210140 - 2207915 - | extracellular solute-binding protein TERM 1134 2209804 - 2209820 + g 70 -9.3 -3.79906 | CGCCCGGCGCATCAG CGGCCAG GCG CCGGCCG TTCTTGTCCAGATAG Lcho_2034 2211075 - 2210149 - | muramoyltetrapeptide carboxypeptidase Lcho_2035 2211763 - 2211068 - | CMP/dCMP deaminase zinc-binding TERM 1135 2211399 - 2211411 + g 77 -10.5 -4.13767 | AGGTTCACCACCGAG CCGGC CGC GCCGG TTTTCGGATCCCAGG TERM 1136 2211691 - 2211725 + g 73 -6.3 -4.34402 | overlap 2211696 CGCCGGCCAGGTGCG CGTTGAGCGCCTGGT CGAGT GCCAGGCGCATGGTG TTTTCGTCTCGGGAG TERM 1137 2212728 - 2212783 + G 84 -19 -2.98823 | gap 1 GCGGCTGACGCGCGA GCA-GGTGCTGGCGCGCAGCATCCCGG CGG TCGAGCTGCTGGGCGCCACCACCGTGC TGTGTGTCGACAAGA Lcho_2036 2211832 - 2214405 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC Lcho_2037 2214844 - 2214368 - | AsnC family transcriptional regulator TERM 1138 2215664 - 2215622 - g 83 -8.1 -4.67353 | CGACGCACTGAAAAA GGCCGCGCCCGCCGCCGGC CTGAC GCTGGTGGAAGCCGCCGCC GCCCGCACGGTCGAC Lcho_2038 2215071 - 2216045 + | hypothetical protein TERM 1139 2216791 - 2216834 + G 75 -17.4 -2.6381 | gap 1, overlap 2216831 GACGCTGCTGCCCGC CCGCACCCTGG-TGCTGACCA CCC TGGCCTGCATCCTGGGTGCGG TGCTCTACCGCTTCT Lcho_2039 2216096 - 2217037 + | inner-membrane translocator TERM 1140 2217361 - 2217383 + G 76 -3.3 -4.65895 | gap 1, opp_overlap 2217345 2217361, overlap 2217363 2217366 2217368 GCGCTGGCCTGGAAA CGCGGCGCCG GCCG CGGC-CTGGG TTTTTCGCTCAACCG TERM 1141 2217505 - 2217456 - g 77 -10.7 -4.07568 | gap 3, opp_overlap 2217462 GCTGGGCCTCGAAAA CCGCCTGGC-C-GACCGCATCGGC CTGCT GTCGG-GCGGCCAGCGCCAGGCGG TGAGCCTGCTGATGG Lcho_2040 2217037 - 2217831 + | ABC transporter-related protein Lcho_2041 2217935 - 2219161 + | Glu/Leu/Phe/Val dehydrogenase TERM 1142 2219407 - 2219388 - g 72 -11.4 -3.63515 | gap 1, opp_overlap 2219388, overlap 2219391 CTTCATCGTCAACAA CGAGCCGCG TAG CGCGGC-CG CGTACTTCGCCGCCG Lcho_2042 2219206 - 2220282 + | 4-hydroxyphenylpyruvate dioxygenase TERM 1143 2220443 - 2220467 + G 77 -6.4 -4.59773 | gap 1, overlap 2220444 GCACGTGTTCCTCGA TGCCGGCCACG GCAA CGTG-CTGGCG TTTTTCGAGCTGCCC Lcho_2043 2220279 - 2220830 + | glyoxalase/bleomycin resistance protein/dioxygenase Lcho_2044 2220827 - 2222122 + | fumarylacetoacetase TERM 1144 2222173 - 2222148 - g 70 -12.5 -3.42354 | CATCGGAACCGACAA GCTCGACGCCC GCCA GGCCGCCGAGC AGCTCACGCTGCTGC Lcho_2045 2222122 - 2222445 + | transcriptional coactivator/pterin dehydratase Lcho_2046 2222459 - 2223370 + | phenylalanine-4-hydroxylase TERM 1145 2223955 - 2223933 - g 73 -6.8 -4.41548 | overlap 2223934 2223935 CGACACCCCACAAAA CCGCGCCGCG ATG CCCGACGCCG ACCCGGCCCGCTGGG Lcho_2047 2223367 - 2224068 + | short-chain dehydrogenase/reductase SDR Lcho_2048 2227295 - 2224095 - | CzcA family heavy metal efflux protein Lcho_2049 2228863 - 2227292 - | RND family efflux transporter MFP subunit TERM 1146 2228511 - 2228525 + g 71 -8.5 -4.09685 | ACCACCTCGATGGCG GCGCC GATCG GGCGC TTTTCGACCGTCGCC TERM 1147 2228737 - 2228757 + g 70 -14.7 -2.88544 | opp_overlap 2228711 GCTCGGCGGTCGGTG CCGCCGTGT CGG ACGCGGCGG TCTGTGCCGATGCAC Lcho_2050 2230104 - 2228869 - | CzcC family heavy metal RND efflux outer membrane protein TERM 1148 2230169 - 2230141 - R 73 -13.8 -2.85297 | gap 1, opp_overlap 2230138 2230161, overlap 2230138 2230136 CGACCGGAAACAGCA CGGCACAGCGCCC GGGC GGGCGCAG-GCCG ACAGCGTTTCGCGCT Lcho_2051 2230575 - 2230183 - | hypothetical protein TERM 1149 2230954 - 2230928 - g 72 -11.4 -3.71888 | overlap 2230930 2230931 AAGCACATGGAAGAA GACGGCGCCCGC GCA GCGGCCGCCAGC GCCAAGCATTGAACG TERM 1150 2230952 - 2230930 - g 72 -12.6 -3.43446 | overlap 2230928 2230931 GCACATGGAAGAAGA CGGCGCCCGC GCA GCGGCCGCCA GCGCCAAGCATTGAA Lcho_2052 2230808 - 2230966 + | hypothetical protein Lcho_2053 2231094 - 2232533 + | hypothetical protein Lcho_2054 2234513 - 2232546 - | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC TERM 1151 2233639 - 2233657 + g 72 -11.6 -3.72576 | ATGCCGTGCATCAGG CCGCCGGC GTT GCCGGAGG TTTCCTGCGCCGGCC Lcho_2055 2234595 - 2235995 + | MiaB-like tRNA modifying enzyme YliG Lcho_2056 2236017 - 2237216 + | Cys/Met metabolism pyridoxal-phosphate-dependent protein Lcho_2057 2237684 - 2237220 - | SsrA-binding protein TERM 1152 2237996 - 2238014 + G 80 -9.5 -4.16943 | overlap 2238004 2238005 CGAGTCGGTCACGAT GGGCCTG GTCGA CGGGCCC TTTTCGCATCTCGAG Lcho_2058 2237769 - 2238236 + | cyclase/dehydrase Lcho_2059 2238223 - 2238603 + | hypothetical protein Lcho_2060 2239162 - 2238617 - | putative transmembrane protein TERM 1153 2239998 - 2239963 - g 72 -11.9 -3.69283 | gap 2 GAAGGCACCGAAGAA CGCGTCGAACTGCTGGC CCGT GCCGGC-GT-CGACGCG ATCGTGGTCGACACC Lcho_2061 2239273 - 2240742 + | inosine-5'-monophosphate dehydrogenase Lcho_2062 2240755 - 2242065 + | major facilitator transporter Lcho_2063 2242073 - 2243671 + | GMP synthase, large subunit TERM 1154 2243882 - 2243898 + G 72 -11.5 -3.60627 | GCTGGCTGGTCTTCG GCCTGCC GCT GGCGGGC TTTGCGGTCGGCTGG TERM 1155 2244690 - 2244720 + G 73 -14.7 -3.15544 | gap 1 GCCGCTGTTCTTCAT CGGCGCCACGCTCG GCAA CGCGC-TGGCGCCG TTGCTGCAACTGCCG TERM 1156 2245000 - 2244957 - g 73 -14.6 -3.16564 | GCCCGAGGGCATGAA GCTCGGCGACG-TGCCGGCC TACCGC GACCGGCAGCG-CGCCGCGC AGGACGCTGCCGACG Lcho_2064 2243713 - 2245035 + | chloride channel core Lcho_2065 2245492 - 2245049 - | thioesterase superfamily protein Lcho_2066 2246197 - 2245529 - | hypothetical protein Lcho_2067 2246999 - 2246217 - | short-chain dehydrogenase/reductase SDR Lcho_2068 2249292 - 2247103 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 1157 2247955 - 2247925 - G 70 -13.3 -3.29144 | gap 1 CGAGCCGTCGTAGAA GGCCAGGCTGTCGC GTCC GCG-CAGCTTGGCC GCCTGCATCGCGCTG TERM 1158 2248332 - 2248309 - G 79 -13.8 -3.63068 | opp_overlap 2248300 2248323 2248326 GTACATCAGCGCAAA CGCCTGCTCG CGAT CGAGCTGGCG CAACAGCTGGTTCTC TERM 1159 2249509 - 2249498 - H 73 -5.8 -4.37092 | opp_overlap 2249496 2249498 AGGCGCCTCACAAAA GCAC GGTC GTGC TATTTGATGAACTTC TERM 1160 2249776 - 2249766 - g 77 -6.8 -4.56597 | overlap 2249767 GTGGTGCTCGAAAAA GGCT CCG AGCC GGGCGCCCACATCCT Lcho_2069 2249604 - 2251289 + | electron-transferring-flavoprotein dehydrogenase Lcho_2070 2251478 - 2253766 + | cellulose synthase subunit B TERM 1161 2253964 - 2253978 + GF 74 -11.4 -3.63991 | overlap 2253955 ACCACCTCCGAAGGC CAGGCC TAC GGCCTG TTCTTCGCGCTGGTG Lcho_2071 2253814 - 2254953 + | cellulase Lcho_2072 2254923 - 2258657 + | cellulose synthase domain-containing protein Lcho_2073 2260262 - 2258673 - | cellulose synthase operon protein YhjU TERM 1162 2260165 - 2260120 - G 76 -11.8 -3.74693 | overlap 2260088 GGCCAGGCCAGGAAA CGCCAGGCCCGGCGCCA-GCCC GGAT GGGCCCAGGGCCAGGCC-AGCG CCACCGCGAACAGCA Lcho_2074 2262829 - 2260274 - | cellulose synthase catalytic subunit (UDP-forming) Lcho_2075 2263706 - 2262924 - | enoyl-CoA hydratase/isomerase TERM 1163 2263777 - 2263748 - R 74 -10.8 -3.78329 | gap 2, overlap 2263749 CGTGATCAATCGAAA GCCTGCGTCGAGCG AGCC CGCTCG-CGCAG-C TGGAACTTCTGGATC Lcho_2076 2265408 - 2263738 - | AMP-dependent synthetase and ligase TERM 1164 2265364 - 2265341 - G 76 -7.4 -4.36914 | gap 1, opp_overlap 2265343 2265345 2265361, overlap 2265343 CTGCGCTCGACAAAA CT-CACCGGGC TGA GCGCGGTGTAG TTGGCCGCGGTGCGC Lcho_2077 2265513 - 2266685 + | lytic murein transglycosylase B Lcho_2078 2266744 - 2268708 + | ABC transporter-related protein Lcho_2079 2268763 - 2269932 + | radical SAM domain-containing protein Lcho_2080 2270242 - 2270667 + | OsmC family protein Lcho_2081 2271627 - 2270698 - | asparaginase Lcho_2082 2271824 - 2272519 + | LexA family transcriptional regulator Lcho_2083 2272823 - 2272924 + | hypothetical protein TERM 1165 2273667 - 2273644 - g 73 -6.6 -4.39696 | overlap 2273646 GGTGAAAGCAAGAAA CTGGGTCAGC GCTG GCTGCCCGAG CAGCTGATCGAGCGC Lcho_2084 2272954 - 2274033 + | tRNA 2-selenouridine synthase TERM 1166 2274058 - 2274042 - T 100 -10.8 -4.86621 | ATCCTGAATGAAAAA CCGGGC GCCAG GCCCGG TTCGACGTGGGGGAC TERM 1167 2274096 - 2274118 + T 100 -19.2 -3.83409 | TGCCGCCGCACCCCG CGATCCGGCC TGA GGCCGGATCG TTTCGTCCTGTCTCA Lcho_2085 2274868 - 2274131 - | acetoacetyl-CoA reductase TERM 1168 2274915 - 2274891 - R 73 -12.1 -3.33696 | opp_overlap 2274890 2274893 2274898, overlap 2274895 TCTCCTTGGAATGAA CACACCGGGCA GGA TGCCCGGGATG GGTTCGTTGCCCATC TERM 1169 2274911 - 2274895 - R 78 -13.7 -3.18366 | opp_overlap 2274893 2274890 2274898, overlap 2274891 CTTGGAATGAACACA CCGGGCA GGA TGCCCGG GATGGGTTCGTTGCC Lcho_2086 2276223 - 2275045 - | acetyl-CoA acetyltransferase Lcho_2087 2278062 - 2276302 - | poly(R)-hydroxyalkanoic acid synthase, class I TERM 1170 2276931 - 2276954 + g 71 -16 -2.62184 | TGAGCAGCCCGGGGC CCTTGGGCGC GTCG GCGCCCAGGG TGATCTCGCGCAGCC Lcho_2089 2279251 - 2278430 - | hypothetical protein Lcho_2088 2278214 - 2278510 + | hypothetical protein TERM 1171 2279212 - 2279196 - GT 87 -15.1 -3.68351 | CGCGGATGACCGAAA CGCGGCC ACA GGCCGCG CTCGTCGATCTCGGT Lcho_2090 2279893 - 2279252 - | maleylacetoacetate isomerase Lcho_2091 2279973 - 2280518 + | NUDIX hydrolase TERM 1172 2281152 - 2281136 - g 70 -13.7 -3.14132 | overlap 2281140 TTCCGCTTCGACGAA CGCACGC CGG GCGTGCG CGAGCAGCGCGTCGG Lcho_2092 2280641 - 2282863 + | type I secretion system ATPase Lcho_2093 2282860 - 2284266 + | HlyD family type I secretion membrane fusion protein TERM 1173 2284845 - 2284820 - g 70 -13.3 -3.38272 | CATGACGACCCAGAA CGGCATTGTCG AGAT CGACGATGCCG GCACCCGCCTGGCCC TERM 1174 2285540 - 2285528 - g 76 -9.1 -4.26019 | overlap 2285519 2285531 GAACTACACCGAAAA CGACG CCG CGTCG CCGATCGCCCCGGCG Lcho_2094 2284584 - 2288870 + | outer membrane adhesin like proteiin Lcho_2095 2290779 - 2288881 - | diguanylate cyclase/phosphodiesterase TERM 1175 2289115 - 2289093 - G 71 -9.1 -4.07568 | opp_overlap 2289098, overlap 2289094 GGCCGGCCTCGAAAA CCGCATGGC TGGTG GCCATGCGT TCACCGACATGCTCG Lcho_2096 2291542 - 2290805 - | hypothetical protein TERM 1176 2290960 - 2290930 - G 76 -7.4 -4.36595 | overlap 2290932 TATTGAAACTGAAAA CAGGCAGCAGGTCG GGG CGACGCGATGCCGG CCGAATCTCGCCGAT TERM 1177 2291523 - 2291470 - G 75 -5.4 -4.56775 | gap 1, opp_overlap 2291496, overlap 2291472 ACGCTTGCTGAAAAA TCCTGAACAACGCGACACAGATCAC GGTCA GCGATCTGCAG-GCGTTGCTCAATA ACAGCATGTAGGACG TERM 1178 2292243 - 2292211 - g 72 -13.4 -3.53091 | gap 1 AGGCCGCCCTCGAAA GCACGCGTGCCTACG CCGA CGT-GGCGCGCGCGC GTCGCATGGTGAAAC Lcho_2097 2291781 - 2293682 + | TolC family type I secretion outer membrane protein TERM 1179 2293690 - 2293706 + T 100 -15.1 -4.86621 | opp_overlap 2293676 ACCGCTGACCCGCCG CCGCGGC CTT GCCGCGG TTTTTACTTGCGCAT TERM 1180 2293732 - 2293774 + T 70 -11.2 -3.38991 | opp_overlap 2293742 2293756, overlap 2293733 2293758 CGCATCAAGGTGCTC TTGCCGAACAGGCTTTCGAT CAG ATCGACCGCCAGTTCGGCCG TCTTGTTGCGCAGAT Lcho_2098 2294558 - 2293710 - | arginase Lcho_2099 2295547 - 2294636 - | hypothetical protein Lcho_2100 2296370 - 2295615 - | UBA/THIF-type NAD/FAD binding protein TERM 1181 2295962 - 2295935 - G 78 -17.8 -2.63596 | gap 1 CGGCACCTGACACCA GCGGCCTGGCGTG CTG CACGC-AGGCCGC ATTGACCGCCTGGCG TERM 1182 2296445 - 2296392 - R 70 -8 -3.95787 | gap 2, overlap 2296403 2296405 2296406 GAGCATACCCAGAAA CACCCCCGAAAC-AG-CGCGGGGGCC CGAA GGCCCCCGCGTCAGGATCCGGACCTG CCAGCCGGGTGTCAG TERM 1183 2296433 - 2296403 - R 90 -16.1 -3.58329 | gap 1, overlap 2296392 2296405 2296406 GAAACACCCCCGAAA CAG-CGCGGGGGCC CGAA GGCCCCCGCGTCAG GATCCGGACCTGCCA TERM 1184 2296430 - 2296405 - R 93 -17.5 -3.36341 | overlap 2296403 2296392 2296406 AACACCCCCGAAACA GCGCGGGGGCC CGAA GGCCCCCGCGT CAGGATCCGGACCTG TERM 1185 2296429 - 2296406 - R 100 -21 -2.61322 | overlap 2296405 2296403 2296392 ACACCCCCGAAACAG CGCGGGGGCC CGAA GGCCCCCGCG TCAGGATCCGGACCT Lcho_2101 2297905 - 2296457 - | carboxyl-terminal protease Lcho_2102 2299149 - 2298079 - | ABC transporter-related protein TERM 1186 2298187 - 2298201 + g 72 -11.4 -3.59262 | opp_overlap 2298183 ATGGGCCAGAACCTG CTCGCC GCT GGCGAG TTTCAGGGTGTAGAG TERM 1187 2299199 - 2299183 - H 72 -2.9 -4.59511 | opp_overlap 2299171 2299170, overlap 2299172 AAGACGGTTGAAAAA CCGCTCT ATC ATAACGG TCAATTGGCAATGCA Lcho_2103 2299239 - 2300870 + | binding-protein-dependent transport systems inner membrane component TERM 1188 2300942 - 2300928 - f 72 -7 -4.22346 | CAAACCGATTCAAAA GGGCCG ACC CGCCCC CGCGATCACGGCGGT TERM 1189 2301103 - 2301075 - f 84 -14 -3.63627 | gap 1, opp_overlap 2301097, overlap 2301096 2301098 TTCTCATAGGTGAAA CGCGCG-GTTTTG GCGC CAAAACACGCGCG GGCCCAAGCTGGCAC Lcho_2104 2301175 - 2302695 + | aldehyde dehydrogenase TERM 1190 2302747 - 2302767 + F 95 -15.4 -4.16943 | ATCCGATCGCTTGAC GGGGCGGC CATGT GCCGCCCC TTTTCACGTCTGCCA Lcho_2105 2302812 - 2303180 + | hypothetical protein Lcho_2106 2303230 - 2304078 + | 7-cyano-7-deazaguanine reductase TERM 1191 2304446 - 2304458 + G 76 -9.1 -4.2679 | CCTGACCGTGGGTTA CAGCG ACA CGCTG TTTTCATCCCAGTTC Lcho_2107 2304120 - 2304479 + | arsenate reductase and related Lcho_2108 2304639 - 2305001 + | roadblock/LC7 family protein TERM 1192 2305415 - 2305375 - g 71 -6.2 -4.18018 | gap 1, opp_overlap 2305389 GTCGGCGACCGAAAA GCTGATCGTGCA-CTTC CTCGGCCT GACGCTGCTCGATCAGC TGGGGATTGATCTGT Lcho_2109 2305001 - 2305774 + | ABC-type phosphate/phosphonate transport system periplasmic component-like protein Lcho_2110 2306946 - 2305795 - | hypothetical protein TERM 1193 2308132 - 2308087 - g 73 -13.9 -3.42583 | gap 1, overlap 2308111 CGAATACATCTACAA GTTCGTCAGCCGCGACGCCATC AAG GCCGGCGGCGCGGCCGCC-AAC GCCACGCTGCTCGAC Lcho_2111 2307035 - 2308951 + | hypothetical protein TERM 1194 2309729 - 2309673 - g 76 -3.4 -4.65895 | gap 2, overlap 2309686 2309688 2309704 GGTGCCAGCCAAAAA GGCGGC-CG-CGAAACAGGCTCCGGCCC GGA AAGCCGGCGCCAGGGCCGACACGTCGCC GGCCATCCTGCCGCC TERM 1195 2309718 - 2309688 - g 70 -12.5 -3.34398 | gap 1, overlap 2309686 2309673 2309704 GGCGGCCGCGAAACA GGCTCCGGC-CCGG AAAG CCGGCGCCAGGGCC GACACGTCGCCGGCC Lcho_2112 2309050 - 2310033 + | hypothetical protein Lcho_2113 2310065 - 2310772 + | riboflavin synthase, alpha subunit Lcho_2114 2310789 - 2311340 + | hypothetical protein Lcho_2115 2312343 - 2311423 - | pyruvate carboxyltransferase TERM 1196 2312262 - 2312274 + g 83 -3.3 -4.93365 | overlap 2312260 CGATCTTGTGGGCGG CGGCT ACC GGCTG TTTTTCGTTCTGCAG Lcho_2116 2314444 - 2312366 - | carbamoyl-phosphate synthase L chain ATP-binding Lcho_2117 2315245 - 2314457 - | enoyl-CoA hydratase/isomerase TERM 1197 2314728 - 2314710 - G 70 -10.2 -3.72695 | overlap 2314714 AGCTCGTGCACGAAA CCGAGCCG ATG CGCCTCGG TGGCGCTGAAGCGTT Lcho_2118 2316870 - 2315248 - | propionyl-CoA carboxylase TERM 1198 2316466 - 2316483 + g 71 -6.9 -4.16842 | overlap 2316457 2316468 GTTCTGCTGCGCGAT CTCCTGC GCGC GCAGGTG TTTCTTGACGGTCAG Lcho_2119 2318044 - 2316872 - | acyl-CoA dehydrogenase domain-containing protein Lcho_2120 2318223 - 2318927 + | TetR family transcriptional regulator Lcho_2121 2319009 - 2319245 + | hypothetical protein Lcho_2122 2320386 - 2319283 - | acyltransferase 3 Lcho_2123 2324120 - 2320383 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 1199 2321255 - 2321310 + g 75 -14.6 -3.41051 | gap 1, overlap 2321256 GCTCGAAGCGGCCGG TGCCGAGGCCGCCCTGCTGCAGCGC ACCGATG GCGCGGC-GCACGCAGGCCTCGGCG TTGTCCTGCACATGC TERM 1200 2321256 - 2321309 + g 71 -15.9 -2.64416 | gap 1, overlap 2321255 CTCGAAGCGGCCGGT GCCGAGGCCGCCCTGCTGCAGCGC ACCGATG GCGCGGC-GCACGCAGGCCTCGGC GTTGTCCTGCACATG TERM 1201 2321595 - 2321565 - G 86 -17.7 -3.28924 | gap 1 GATGGTGGTCGAGAA CGGCGGCATCGAGC CGGG GCT-GATGCCGCCG ATGTCGGCGTGGTGG TERM 1202 2323014 - 2322975 - G 74 -4 -4.57073 | opp_overlap 2322961, overlap 2322962 2322977 CACGCGCGGGAAAAA CGCCGGCGCGATCTTGCC CAGC AGCAGGTTGGCGTCGGTG ACGGCCAGCGGCCCG Lcho_2124 2325317 - 2324139 - | methyltransferase small Lcho_2125 2325735 - 2325295 - | hypothetical protein Lcho_2126 2326815 - 2325796 - | dihydrouridine synthase DuS Lcho_2127 2327005 - 2327511 + | hypothetical protein Lcho_2128 2328163 - 2327552 - | hypothetical protein Lcho_2129 2331249 - 2328259 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1203 2329298 - 2329325 + g 71 -16.3 -2.62983 | TAGCCGAGCGTCTCG CCGGTCGCCAG CTGCAC CTGGCGGCCGG TGGTGTCGACGTCGG TERM 1204 2329905 - 2329927 + g 74 -4.1 -4.56597 | gap 1, overlap 2329869 CGCCGCAGCCCTCGA GGGTGTCGAG CAGG CT-GGCGCCC TTTTTCAGCGGCACG TERM 1205 2331677 - 2331620 - g 90 -17.5 -3.71848 | overlap 2331617 2331622 2331623 CCCTGCGATCAAGAA GACCGCCGCACCCGCCGCGAAGAAGGC CGCC GCCTCGGGCGCGACGGACGCGGCGAAC CTGGCCAGCGCCGCC TERM 1206 2331675 - 2331622 - g 93 -18.7 -3.44284 | overlap 2331617 2331620 2331623 CTGCGATCAAGAAGA CCGCCGCACCCGCCGCGAAGAAGGC CGCC GCCTCGGGCGCGACGGACGCGGCGA ACCTGGCCAGCGCCG TERM 1207 2331674 - 2331623 - g 85 -20 -2.66249 | overlap 2331617 2331622 2331620 TGCGATCAAGAAGAC CGCCGCACCCGCCGCGAAGAAGGC CGCC GCCTCGGGCGCGACGGACGCGGCG AACCTGGCCAGCGCC TERM 1208 2331987 - 2331947 - g 73 -10.3 -3.7732 | overlap 2331948 2331950 CTCGCACACCAAGAA GGACGTCGACGACACGGGC GCC GCCAAGGTCACCGACGTCA ACGTCAAGGTGCCGC Lcho_2130 2331561 - 2332292 + | hypothetical protein Lcho_2131 2332302 - 2333111 + | hypothetical protein Lcho_2132 2333115 - 2333804 + | hypothetical protein Lcho_2133 2336271 - 2333839 - | radical SAM domain-containing protein Lcho_2134 2336660 - 2336442 - | hypothetical protein Lcho_2135 2338820 - 2336928 - | ABC transporter-related protein Lcho_2136 2338991 - 2340010 + | extracellular solute-binding protein TERM 1209 2340211 - 2340226 + G 85 -4 -5.00616 | gap 1, overlap 2340194 2340215 TGGCGCTGCGCGGCA TCCGCAG CGG CTG-GGA TTTTTTGACCCAGAC TERM 1210 2340369 - 2340427 + G 70 -13 -3.41125 | overlap 2340371 GTGCTGATCACGCTG CTGGGCACCGCGC-TCGGCGTGGGGCGC TACTC GCGCAACGCGCTGGTGCGCGG-GCTCTG TTATGGCTATGTCGA TERM 1211 2340371 - 2340425 + G 70 -14.2 -3.27436 | overlap 2340369 GCTGATCACGCTGCT GGGCACCGCGC-TCGGCGTGGGGCGC TACTC GCGCAACGCGCTGGTGCGCGG-GCTC TGTTATGGCTATGTC Lcho_2137 2340039 - 2341070 + | polar amino acid ABC transporter, inner membrane subunit TERM 1212 2341587 - 2341636 + G 77 -4.8 -4.75219 | gap 2, overlap 2341585 CATCAGCTGCGTGCG CCGTT-GC-TGGCGGCCCTGGCTG GTGC CGGCCTGGGCGGGCGTGCTGGCGG TTTTCTTCGTGCTTA Lcho_2138 2341231 - 2342331 + | polar amino acid ABC transporter, inner membrane subunit Lcho_2139 2342456 - 2343211 + | ABC transporter-related protein Lcho_2140 2343208 - 2343354 + | hypothetical protein Lcho_2141 2343344 - 2343703 + | hypothetical protein Lcho_2143 2345084 - 2344119 - | LysR family transcriptional regulator Lcho_2144 2345211 - 2346017 + | carboxymuconolactone decarboxylase Lcho_2145 2346029 - 2346205 + | hypothetical protein TERM 1213 2347256 - 2347217 - g 76 -12.2 -3.73068 | gap 2 GGCGCAACGCAAGAA CGCCA-C-GCCCGGCCAG TTGTCG CTGGCCTGGCTGCTGGCG CAAAAGCCCTGGATC TERM 1214 2347286 - 2347262 - g 74 -9.9 -4.07568 | GCTGCTGGCGCAAAA GCCCTGGATCG TGC CGATTCCGGGC ACCACCAACGCGGCC Lcho_2146 2346240 - 2347457 + | aldo/keto reductase Lcho_2147 2348692 - 2347685 - | sodium/calcium exchanger membrane region Lcho_2148 2348815 - 2350065 + | hypothetical protein Lcho_2149 2350189 - 2350779 + | pyruvate/ketoisovalerate oxidoreductase, gamma subunit Lcho_2150 2350763 - 2352028 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Lcho_2151 2352365 - 2353396 + | thiamine pyrophosphate binding domain-containing protein Lcho_2152 2353393 - 2355108 + | glutamate synthase (NADH) Lcho_2153 2355173 - 2356387 + | extracellular solute-binding protein Lcho_2154 2356363 - 2358099 + | binding-protein-dependent transport systems inner membrane component Lcho_2155 2358096 - 2358740 + | ABC transporter-related protein TERM 1215 2359424 - 2359469 + G 90 -17.6 -3.63805 | overlap 2359447 2359448 TGGACGCTGGTGCCG GCGCTGCTGGTGCTGGGCG-GG CTGG CCACGCCCGGCAGC-GCGGCGC TTTCGGGTCTGGCGT Lcho_2156 2358737 - 2359912 + | major facilitator transporter Lcho_2157 2359978 - 2360619 + | cation efflux protein Lcho_2158 2360603 - 2361055 + | disulphide bond formation protein DsbB Lcho_2159 2361052 - 2361717 + | DsbA oxidoreductase Lcho_2160 2362219 - 2361722 - | hypothetical protein Lcho_2161 2362924 - 2362283 - | GTP cyclohydrolase II TERM 1216 2362976 - 2362996 + H 71 -8.1 -4.08216 | overlap 2362977 ATCGCATCCGCCGCC GCCGAGCCC TCT GGGCGCGGG TTTTGGGAGGGGTGG Lcho_2162 2363124 - 2364827 + | hypothetical protein Lcho_2163 2364838 - 2366187 + | hypothetical protein Lcho_2164 2366218 - 2367324 + | glycosyl hydrolase TERM 1217 2369181 - 2369201 + G 72 -12.5 -3.53012 | GACACGCTCGATCGG GTCGGCGCC GCC GCCGCCGAC TTTGCCGCCGCGCAC Lcho_2165 2367396 - 2369822 + | transporter, putative Lcho_2166 2369829 - 2370200 + | Rieske (2Fe-2S) domain-containing protein Lcho_2167 2370313 - 2372349 + | methyl-accepting chemotaxis sensory transducer Lcho_2168 2373671 - 2372379 - | HipA domain-containing protein TERM 1218 2374188 - 2374172 - H 72 -10.9 -3.49653 | ACGATCCCGAGAGAA GCCATAG CCG CTATGGC AGGATCGTTGCCGCC Lcho_2169 2374432 - 2374803 + | hypothetical protein Lcho_2170 2376169 - 2375075 - | hypothetical protein TERM 1219 2376022 - 2375993 - G 86 -9.9 -4.56597 | gap 1 GTGCTCGGCCAAAAA GCTTGCCGCCGTGG CCA CCACGGC-GCTGGC GAGCAGGCCGGGGAA Lcho_2171 2377813 - 2376173 - | AMP-dependent synthetase and ligase Lcho_2172 2379272 - 2377914 - | major facilitator transporter Lcho_2173 2380279 - 2379287 - | alcohol dehydrogenase TERM 1220 2379728 - 2379751 + g 84 -2.2 -5.11063 | overlap 2379717 2379715 GATGGTGTGCGCACA GCCGTGGGCG TGTG CGATCGCTGC TTTTTCTTCGGTGCT Lcho_2174 2381365 - 2380307 - | hypothetical protein Lcho_2175 2382341 - 2381421 - | taurine dioxygenase Lcho_2176 2385145 - 2382479 - | ATP-dependent transcription regulator LuxR TERM 1221 2383136 - 2383097 - G 87 -16.4 -3.61398 | gap 1 GGGTTCGTCGAAGAA GGCCTCGACCTGCACCAGC AGC GCCCG-GCAGGTCGCGGCC CGGTAGCCGCGCGCA TERM 1222 2385398 - 2385418 + G 70 -13.9 -3.21099 | TCGGCTGCGCTGGCG GCGCCCGCC CCG GGCGAGCGC TTCATCGTCGACGGC Lcho_2177 2385326 - 2386105 + | SCP-like extracellular Lcho_2178 2386699 - 2386289 - | hypothetical protein TERM 1223 2386812 - 2386835 + r 79 -5.9 -4.66833 | gap 1, overlap 2386791 GAGCGAGCGGCTGCG GGC-GCGGCG GCTCA CGCCTCTGCC TTTTTGCGCTTCACC Lcho_2179 2387155 - 2386823 - | hypothetical protein Lcho_2180 2387467 - 2387333 - | hypothetical protein Lcho_2181 2388006 - 2387470 - | hypothetical protein Lcho_2182 2388452 - 2388003 - | hypothetical protein Lcho_2183 2389138 - 2388449 - | serine/threonine protein kinase Lcho_2184 2389441 - 2389172 - | hypothetical protein Lcho_2185 2389770 - 2389438 - | hypothetical protein Lcho_2186 2389990 - 2389754 - | hypothetical protein Lcho_2187 2390805 - 2389993 - | hypothetical protein TERM 1224 2390894 - 2390945 + r 100 -5.5 -5.58454 | overlap 2390895 2390896 TCCGGGTGTCGTGGG AATGGGTGCGGGTGGGTGGCGGC AAACAA GCCGCACCCCACACGTTCCCGCC TTTTTTTCCTATAGG Lcho_2188 2393196 - 2390995 - | hypothetical protein TERM 1225 2391051 - 2391066 + g 88 -4.6 -5.055 | CAACCAACTCGGGAA CGGGTG GCGC CGCCTG TTTTTTCCAGGTTGC Lcho_2189 2393723 - 2393193 - | hypothetical protein Lcho_2190 2393931 - 2393725 - | hypothetical protein Lcho_2191 2394136 - 2393924 - | hypothetical protein Lcho_2192 2394396 - 2394133 - | hypothetical protein TERM 1226 2394318 - 2394295 - G 74 -16.8 -2.52676 | overlap 2394308 2394312 GAGTCGGCCAACGCA CGACGGCTCA AAAC TGAGCCGTCG ATCGGCCTGGGCGGA TERM 1227 2394359 - 2394338 - G 73 -14.5 -3.14132 | opp_overlap 2394325 2394354, overlap 2394308 2394354 GCCTGGGCGGATGAA CTGCGCTCA GAAA TGAGCGCAG CGTATGCGGCAGCTT TERM 1228 2394461 - 2394427 - H 75 -10.7 -3.88559 | gap 1, overlap 2394428 AACGAGCTTCAGAAA TCCACCC-CTGCCGTT TTCA AGCGGCAGAGGGTGGG CGGGATGTTGAAAAC TERM 1229 2394460 - 2394428 - H 75 -14.2 -2.92653 | gap 1, overlap 2394427 ACGAGCTTCAGAAAT CCACCC-CTGCCGTT TTCA AGCGGCAGAGGGTGG GCGGGATGTTGAAAA Lcho_2193 2394670 - 2394840 + | hypothetical protein TERM 1230 2394867 - 2394885 + T 78 -4.4 -4.82901 | opp_overlap 2394867 2394868, overlap 2394868 2394869 GCAACGACTTGGAAA CCCGGCAC TCA GTGCCGCC TTTTTCTGGCGACGA Lcho_2194 2395325 - 2395035 - | hypothetical protein Lcho_2195 2395762 - 2395322 - | hypothetical protein TERM 1231 2395661 - 2395639 - G 73 -14.8 -3.14051 | overlap 2395637 CCACGTTGACGAACA CGCCGCCGGC ATC GCCAGCAGCG GCGAGCACCTTGGCG Lcho_2196 2396160 - 2395762 - | hypothetical protein TERM 1232 2396112 - 2396134 + g 100 -11.2 -5.13354 | CTTCGGTCTGCATGG GGGTCGCGCT GGT AACGCGGCCC TTTCTTTTTTCTGGG Lcho_2197 2396409 - 2396173 - | phage transcriptional regulator, AlpA TERM 1233 2396460 - 2396448 - R 74 -4.8 -4.58395 | overlap 2396452 CGCATGGTCGAAAAA GCAG GGGCT CTGC CGTCAACTCTGCATT Lcho_2198 2397221 - 2396973 - | hypothetical protein Lcho_2199 2397475 - 2397218 - | hypothetical protein Lcho_2200 2398719 - 2397472 - | integrase family protein TERM 1234 2398891 - 2398863 - H 100 -8.1 -5.21709 | opp_overlap 2398863 CGTGACATGAAAAAA GCCCCTAAGTG GTTGATT CACCGAGGGGC TTGATTCAACGTGAG TERM 1235 2399758 - 2399807 + G 74 -9.4 -4.11751 | gap 3, opp_overlap 2399758, overlap 2399776 GCTGACAGCACCAAA CCGTTCAGTGCCGGCGCACCGGGCG CCC TGCCCGGT-T-TCG-CACCGAACGG TTTTGCCGAATTCGT Lcho_2201 2399659 - 2401062 + | hypothetical protein TERM 1236 2401683 - 2401699 + G 70 -9.3 -3.76968 | overlap 2401696 TGGGATGCCACCGCA CCGGCAG CAC CGGCCGG TTTCATCGGTGACTT Lcho_2202 2401080 - 2403605 + | fibronectin type III domain-containing protein TERM 1237 2403638 - 2403663 + F 100 -23.3 -4.62069 | opp_overlap 2403634 2403633 2403631 CCTTGAAAGAGGCTT GGGCCGCGGGG GCAA CCCCGCGGCCC TTTTTGCGATCGAAA Lcho_2203 2403878 - 2405167 + | permease for cytosine/purines uracil thiamine allantoin TERM 1238 2405191 - 2405209 + T 100 -13.1 -5.44721 | CGCCTCGACCGGAAC GGGCGCC CTGGT GGCGCCC TTTTTTTCGCCTGCT Lcho_2204 2406117 - 2405233 - | phosphomethylpyrimidine kinase Lcho_2205 2406776 - 2406114 - | thiamine-phosphate pyrophosphorylase TERM 1239 2406613 - 2406627 + g 80 -3.4 -4.82901 | opp_overlap 2406612 GCGCGTTCGACGAAG GCGCGG CTG TCGAGC TTTTTCTCGCGCAGC Lcho_2206 2407656 - 2406769 - | hydroxyethylthiazole kinase Lcho_2207 2409155 - 2407704 - | carbohydrate kinase FGGY Lcho_2208 2409484 - 2409164 - | L-rhamnose 1-epimerase Lcho_2209 2410487 - 2409504 - | monosaccharide-transporting ATPase Lcho_2210 2411515 - 2410484 - | monosaccharide-transporting ATPase Lcho_2211 2413119 - 2411512 - | ABC transporter-related protein Lcho_2212 2414135 - 2413143 - | rhamnose ABC transporter, periplasmic rhamnose-binding protein TERM 1240 2413602 - 2413617 + g 83 -5.4 -4.8048 | gap 1, opp_overlap 2413574, overlap 2413602 CAGGCCGCTGTAGCC GG-GCTG CGC CAGCACC TTTTTCATCTCGCCG Lcho_2213 2415510 - 2414221 - | L-rhamnose catabolism isomerase Lcho_2214 2417660 - 2415537 - | rhamnulose-1-phosphate aldolase/alcohol dehydrogenase Lcho_2215 2417835 - 2418779 + | LysR family transcriptional regulator Lcho_2216 2420123 - 2418828 - | peptidase M16 domain-containing protein Lcho_2217 2420314 - 2421489 + | hypothetical protein Lcho_2218 2421525 - 2421809 + | hypothetical protein Lcho_2219 2421806 - 2422177 + | hypothetical protein TERM 1241 2422411 - 2422393 - T 93 -3.8 -5.4251 | gap 1, opp_overlap 2422410, overlap 2422395 GGCAGAGAGAAAAAA GC-CGGC TTGAGC GCCGCGC CCGATGAGCATTTTC TERM 1242 2422536 - 2422509 - T 88 -14.2 -3.85165 | opp_overlap 2422509 2422509 TACCCCAAAGCCAAA CGGCCTAGCCCT TTGC AGAGCTAAGCCG TTGATTCATATGGTC Lcho_2220 2423655 - 2422705 - | ribokinase-like domain-containing protein Lcho_2221 2423903 - 2424901 + | periplasmic binding protein/LacI transcriptional regulator Lcho_2222 2425094 - 2426053 + | monosaccharide-transporting ATPase TERM 1243 2426448 - 2426430 - g 71 -8.9 -4.02817 | overlap 2426444 GCTCGACAAGAAGAA GATGCTC GAGCA GAGCATC GCCCGCATGAACGAC Lcho_2223 2426053 - 2426844 + | ABC transporter-related protein TERM 1244 2426878 - 2426903 + F 90 -11.7 -4.41348 | overlap 2426879 CCCGTCTGCCTGTGC ACGCCCCGGCC CACC GTCCGGGGCGC TTTGTTTGAAGAGAA TERM 1245 2426879 - 2426902 + F 83 -15.2 -3.24488 | overlap 2426878 CCGTCTGCCTGTGCA CGCCCCGGCC CACC GTCCGGGGCG CTTTGTTTGAAGAGA TERM 1246 2427277 - 2427287 + G 70 -2.4 -4.46926 | overlap 2427275 2427265 AGTGTCAAGCGATCG AGCG CTT CGCC TTTTATGATCGCGTC Lcho_2224 2426928 - 2427398 + | RbsD or FucU transport Lcho_2225 2427438 - 2428706 + | ROK family protein TERM 1247 2428711 - 2428682 - T 71 -4.1 -4.56597 | gap 1, opp_overlap 2428700, overlap 2428686 GCTGTTCCTGAAAAA CCAGCCCTCGCCCG CCA CGGTCT-GAGCCGG CCCGGGTTCAGGCGG Lcho_2226 2432789 - 2428734 - | ATP-dependent helicase HrpA TERM 1248 2430750 - 2430776 + g 80 -10.1 -4.25056 | opp_overlap 2430731 GGTGGTCTCGACCAG CTCGGCCGC CACCAGCCA GCGGCCGGG TTTCTTGCTCAGGTG Lcho_2227 2433216 - 2432833 - | glyoxalase/bleomycin resistance protein/dioxygenase Lcho_2228 2433337 - 2434677 + | amino-acid N-acetyltransferase Lcho_2229 2434738 - 2435010 + | Fe(II) trafficking protein YggX Lcho_2230 2435615 - 2435163 - | hypothetical protein Lcho_2231 2435791 - 2435618 - | hypothetical protein Lcho_2232 2441692 - 2435945 - | Phage-related protein tail component-like protein TERM 1249 2437285 - 2437332 + g 73 -9.9 -3.90112 | gap 3, overlap 2437294 CGGCCAGGTAGAGGC GCAGTCGCAGTGCCACGACTCCGG CCG CCGGCGTC-TGGCTC--CGGCTGC TTTCGTTCGCGGCGC Lcho_2233 2442258 - 2441689 - | hypothetical protein Lcho_2234 2442881 - 2442255 - | hypothetical protein Lcho_2235 2446230 - 2442889 - | prophage tail length tape measure TERM 1250 2443049 - 2443091 + g 77 -14.6 -3.53224 | ACGGTGAGTGCGAGG CCCGCGTCTGCGCCGGCCGC GCT GCCGCTGGCGCGGCCGATGG TTTCGGCCAGGCGTG TERM 1251 2443552 - 2443596 + g 79 -12.8 -3.74693 | gap 1 GGCCAGCAGCCCAAC GGCCTGGGCGGCGCTCATCAG CACG CTGCCGAA-GCTGCCCAGGCC TTTGGTCAAGTCCGC TERM 1252 2445035 - 2445067 + g 77 -7 -4.58283 | gap 2, overlap 2445036 AAGTCATCGCCGCCA AGCGTGGCCTGCGTCG CCT CGAC-CAGGCCG-GCA TTTTTGAACGGGTTC Lcho_2236 2446614 - 2446246 - | hypothetical protein TERM 1253 2446589 - 2446635 + g 100 -18.8 -5.0133 | overlap 2446590 CTGCGCGCGGCAGCG GTGGGGCGCGGTGGCCCG-GCG AGCAC CGCGCGGGCCACCGC-CCTCAG TTTTTTGCGCGGCTC TERM 1254 2446590 - 2446634 + g 100 -22.3 -3.60316 | overlap 2446589 TGCGCGCGGCAGCGG TGGGGCGCGGTGGCCCG-GCG AGCAC CGCGCGGGCCACCGC-CCTCA GTTTTTTGCGCGGCT Lcho_2237 2446982 - 2446632 - | hypothetical protein Lcho_2238 2447958 - 2446993 - | hypothetical protein Lcho_2239 2448215 - 2447997 - | hypothetical protein Lcho_2240 2448710 - 2448249 - | hypothetical protein Lcho_2241 2449120 - 2448707 - | hypothetical protein Lcho_2242 2449348 - 2449130 - | hypothetical protein Lcho_2243 2450357 - 2449476 - | Mu-like prophage major head subunit gpT Lcho_2244 2450812 - 2450399 - | hypothetical protein Lcho_2245 2451987 - 2450866 - | hypothetical protein Lcho_2246 2452632 - 2452054 - | hypothetical protein Lcho_2247 2453393 - 2452638 - | putative head morphogenesis protein SPP1 gp7 Lcho_2248 2455150 - 2453396 - | hypothetical protein Lcho_2249 2456990 - 2455308 - | hypothetical protein Lcho_2250 2457208 - 2456987 - | hypothetical protein Lcho_2251 2457777 - 2457205 - | hypothetical protein Lcho_2252 2458086 - 2457781 - | hypothetical protein Lcho_2253 2458436 - 2458083 - | hypothetical protein Lcho_2254 2458835 - 2458494 - | hypothetical protein Lcho_2255 2459877 - 2458858 - | RNA-directed DNA polymerase (Reverse transcriptase) Lcho_2256 2460568 - 2460143 - | hypothetical protein Lcho_2257 2462149 - 2460605 - | hypothetical protein TERM 1255 2461601 - 2461589 - G 74 -4.7 -4.57073 | overlap 2461590 CATGGTCGGGAAAAA CCGGG CGC CACGG GTCTTGGCCGCAGCG Lcho_2258 2462454 - 2462149 - | hypothetical protein Lcho_2259 2462690 - 2462478 - | hypothetical protein Lcho_2260 2463175 - 2462687 - | peptidase M15A Lcho_2261 2464190 - 2463600 - | hypothetical protein Lcho_2262 2464989 - 2464198 - | hypothetical protein Lcho_2263 2465338 - 2465090 - | hypothetical protein Lcho_2264 2465725 - 2465399 - | hypothetical protein Lcho_2265 2466224 - 2465781 - | hypothetical protein TERM 1256 2466452 - 2466424 - H 75 -6.7 -4.386 | gap 1 TAACGGTTCAGAAAA CGGTCTGCGCGA GTTCCT TCGCCC-GACCG CCAATCGCCTGCTGC TERM 1257 2466593 - 2466612 + H 71 -7.8 -4.07568 | overlap 2466568 GATTTCGCGCAACGG GTGGCCGT CTTC ATGGCCGC TTTTCCGGCAAGGGA Lcho_2266 2466681 - 2467154 + | hypothetical protein Lcho_2267 2467211 - 2467702 + | hypothetical protein Lcho_2268 2467741 - 2468115 + | hypothetical protein Lcho_2269 2468115 - 2468381 + | hypothetical protein Lcho_2270 2468378 - 2468683 + | IclR family transcriptional regulator Lcho_2271 2468683 - 2468958 + | hypothetical protein TERM 1258 2469211 - 2469196 - g 76 -3.2 -4.71828 | opp_overlap 2469176 2469196, overlap 2469175 2469191 2469198 ACCTGATCAAGAAAA TTGCTG ACGT CAGCGA TTTGCTTGAGCTGCA Lcho_2272 2468955 - 2469971 + | hypothetical protein TERM 1259 2471785 - 2471743 - g 80 -10 -4.1822 | gap 3, overlap 2471747 CGGCACCCGAACAAA CCGA-CACCAGCACGC-AGCC GACC GGCTTGCGCG-TGGTGGCCGG GGGCGGCTGATCACC Lcho_2273 2470002 - 2471795 + | hypothetical protein Lcho_2274 2471838 - 2473136 + | hypothetical protein Lcho_2275 2473166 - 2473498 + | hypothetical protein Lcho_2276 2473498 - 2473827 + | hypothetical protein TERM 1260 2474344 - 2474319 - g 71 -6.7 -4.26076 | GGACGCGCATCAAAA GCCGTTGAAGC GCTT GCCGCAGCGGC CCCTGCGCCTGCACC Lcho_2277 2473818 - 2474453 + | hypothetical protein Lcho_2278 2474450 - 2474809 + | helix-turn-helix type 11 domain-containing protein Lcho_2279 2474848 - 2475033 + | hypothetical protein Lcho_2280 2475079 - 2475378 + | transposase IS3/IS911 family protein Lcho_2281 2475375 - 2476262 + | integrase catalytic region Lcho_2282 2476272 - 2476727 + | hypothetical protein Lcho_2283 2476736 - 2476993 + | hypothetical protein TERM 1261 2477155 - 2477181 + F 87 -7.9 -4.77173 | overlap 2477156 2477157 CAGCGATGACCGCTT ACGCCGGGTGT GCGCA ACACCCGGCAC TTTCTTTTCTGGACC TERM 1262 2477156 - 2477180 + F 72 -11.4 -3.45581 | overlap 2477155 2477157 AGCGATGACCGCTTA CGCCGGGTGT GCGCA ACACCCGGCA CTTTCTTTTCTGGAC TERM 1263 2477157 - 2477179 + F 75 -14.9 -2.66625 | overlap 2477156 2477155 GCGATGACCGCTTAC GCCGGGTGT GCGCA ACACCCGGC ACTTTCTTTTCTGGA Lcho_2284 2477202 - 2477678 + | putative phage regluatory protein Lcho_2285 2477675 - 2478037 + | Mor transcription activator domain-containing protein TERM 1264 2478075 - 2478059 - f 93 -13.7 -3.97388 | opp_overlap 2478059 ACACGCCAGCAGAAA GCCCGCT TCG AGCGGGC TTTTTTGCGTCTGGT TERM 1265 2478059 - 2478075 + F 100 -13.7 -5.13473 | opp_overlap 2478059 ACACGCCAGCAGAAA GCCCGCT TCG AGCGGGC TTTTTTGCGTCTGGT Lcho_2286 2478200 - 2478403 + | hypothetical protein Lcho_2287 2478548 - 2478748 + | hypothetical protein Lcho_2288 2478751 - 2478960 + | hypothetical protein TERM 1266 2478974 - 2479000 + F 71 -9.5 -3.74077 | gap 2 GATCGAGGCGCTTCT GGGGTGATCCGGG TGC CCC-G-TCACCCC TTTCACTCTCTGCAA TERM 1267 2479006 - 2479020 + F 75 -2.8 -4.83169 | overlap 2479007 CCGTCACCCCTTTCA CTCTCT GCA AGAGAC TTTTTCTGCGGCCGT TERM 1268 2479742 - 2479726 - g 82 -4.3 -4.76041 | overlap 2479727 GACACCTACGAAAAA CTCGCCG ATG CGGCCAA CAAGGGGCGTTTCTG Lcho_2289 2479258 - 2480313 + | extracellular solute-binding protein Lcho_2290 2480395 - 2480733 + | histone family protein nucleoid-structuring protein H-NS TERM 1269 2480818 - 2480836 + F 100 -13.1 -5.1675 | CCCTGGTCATCTGAA GCGGGCG TCTAT CGCCCGC TTTTTTCATGGATCG TERM 1270 2480958 - 2480968 + F 81 -3.2 -5.03145 | overlap 2480941 GCTCGGTACCTATGC TCGC GCA GTGA TTTTTTCACGACTTG TERM 1271 2481653 - 2481680 + G 77 -10.6 -4.07568 | GTCGGCCAAGCTCCA GGCCGAGGTT CAGGCCAA GACCTCGGCC TTTTCCGGCGACGCA Lcho_2291 2480988 - 2481716 + | NLP/P60 protein Lcho_2292 2481783 - 2482928 + | molybdenum cofactor biosynthesis protein A Lcho_2293 2483427 - 2482930 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lcho_2294 2484573 - 2483446 - | NAD-dependent epimerase/dehydratase Lcho_2295 2485738 - 2485037 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 1272 2485137 - 2485113 - G 85 -4.8 -4.91712 | opp_overlap 2485134, overlap 2485114 2485115 TTGAAGTTACAAAAA TCGCCCCGCA CCAGT CGCGGCGCGT GACCCAGCGCCTCGA Lcho_2296 2486953 - 2485769 - | response regulator receiver sensor signal transduction histidine kinase Lcho_2297 2487708 - 2486950 - | histidine kinase TERM 1273 2487789 - 2487771 - H 71 -10.2 -3.61398 | opp_overlap 2487783 GCCGCGGCCGAAGAA CCCACCGG GAT CCGGTGCG TCATCGACAGGACCG TERM 1274 2488041 - 2488013 - H 71 -7.5 -4.09822 | overlap 2488001 AATCGATCACACAAA TCGGCTTCATC TCATCCT GATGAACCCGA ATCCGTCCGATTGCC TERM 1275 2488411 - 2488427 + H 75 -7.9 -4.29106 | GGTTTCTGCTGTGCG GACTGGC TAC GCCTGTC TTTCTTGATCTCGCC Lcho_2298 2488475 - 2493427 + | heme peroxidase TERM 1276 2493467 - 2493432 - f 88 -15.4 -3.33696 | gap 1, opp_overlap 2493435, overlap 2493435 TCGTGGTGTAAGCAA GCACCCGCCACGGC-GC AGC GCTGCCGTGGCGGGTTT TCCGTTTCATCTTCA TERM 1277 2493435 - 2493464 + F 100 -21.5 -4.38313 | gap 1, opp_overlap 2493435 2493432 TGGTGTAAGCAAGCA CCCGCCACGGC-GC AGC GCTGCCGTGGCGGG TTTTCCGTTTCATCT TERM 1278 2493464 - 2493435 - f 100 -21.5 -2.84098 | gap 1, opp_overlap 2493435, overlap 2493432 TGGTGTAAGCAAGCA CCCGCCACGGC-GC AGC GCTGCCGTGGCGGG TTTTCCGTTTCATCT Lcho_2299 2493495 - 2495039 + | outer membrane efflux protein TERM 1279 2496314 - 2496286 - g 76 -16 -3.23216 | CCGCATCAGCATGAA TGCCCGCCTGCT CGCGC AGCTGGCGGGCA ACTGGGCCAACCTCG Lcho_2300 2495081 - 2497300 + | type I secretion system ATPase Lcho_2301 2497300 - 2498706 + | HlyD family type I secretion membrane fusion protein TERM 1280 2498747 - 2498725 - T 77 -11.9 -3.59979 | GCGGGTGATCCGAAA GCGCCGGCC TCAGT GCCCGGCGC CGTGTCCGACCGATG Lcho_2302 2500035 - 2498734 - | hypothetical protein TERM 1281 2499275 - 2499235 - G 71 -8.9 -4.07568 | gap 1 GGTGGTGGCCGAAAA CCGCGAGTGGGTGCGGGC GTACAG GCCCTCCACCA-TCGCGG CCTGCTCGCTCAGGC Lcho_2303 2501724 - 2500114 - | protein of unknown function DUF894 DitE TERM 1282 2501781 - 2501760 - R 100 -10.8 -5.1356 | CGGCACCAACAAAAA GCCCCACC GGGATG GGCGGGGC TGGTGAACGTCAGGC Lcho_2304 2503339 - 2501825 - | hypothetical protein Lcho_2305 2503814 - 2503350 - | hypothetical protein Lcho_2306 2505270 - 2504182 - | integrase catalytic region TERM 1283 2504470 - 2504443 - G 75 -10.4 -3.98826 | GTACCAATGCACAAA GCCGGCCGCCCA CATG CGCGCGGCCTGC AGATCCGCAAACCCC Lcho_2307 2505704 - 2505267 - | transposition helper protein Lcho_2308 2505723 - 2507636 + | protein of unknown function DUF637 hemagglutinin putative Lcho_2310 2510528 - 2508681 - | type II secretion system protein E TERM 1284 2509936 - 2509951 + g 72 -6 -4.36914 | overlap 2509938 TCGAAGTTGACCGCC GAGGCG GTCT CGCCAC TTTTCTGCGCCGCAC Lcho_2311 2511473 - 2510550 - | spermidine synthase-like protein Lcho_2312 2511997 - 2511470 - | hypothetical protein Lcho_2313 2512842 - 2511994 - | TatD-related deoxyribonuclease Lcho_2314 2513110 - 2513991 + | peptidase S1 and S6 chymotrypsin/Hap Lcho_2315 2514014 - 2515051 + | ATPase Lcho_2316 2515117 - 2516373 + | hypothetical protein Lcho_2317 2516370 - 2517422 + | von Willebrand factor type A Lcho_2318 2517564 - 2518100 + | hypothetical protein TERM 1285 2518138 - 2518153 + F 100 -6.8 -5.78622 | opp_overlap 2518138 CGCGCCAGTCGGAAA CGGATC GCTC GGTCCG TTTTTTTTCGCCTGG Lcho_2319 2518343 - 2519833 + | undecaprenyl-phosphate glucose phosphotransferase TERM 1286 2520651 - 2520670 + G 74 -10 -4.1552 | overlap 2520645 CTCGAGTGGCATGTG CTCGGCAT GTTC GTGCCGAG TTTCTTCACCGGCTC Lcho_2320 2519898 - 2521079 + | major facilitator transporter Lcho_2321 2521237 - 2521836 + | hypothetical protein Lcho_2322 2522775 - 2521843 - | carboxymethylenebutenolidase Lcho_2323 2524210 - 2522888 - | nucleotide sugar dehydrogenase TERM 1287 2524391 - 2524360 - R 75 -12.3 -3.55761 | gap 2 GACGCAGCCCCCAAA CGC-G-CAGCGGGCC CGAA GGCCCGCCGTCTGCG CGGATCAGCTGATCG Lcho_2324 2525021 - 2524416 - | hypothetical protein Lcho_2325 2525325 - 2525777 + | hypothetical protein TERM 1288 2525810 - 2525829 + T 100 -15 -5.52384 | GACCTCGAGATGCGA GGCAGCCC AGGC GGGCTGCC TTTTTTTCGTCCGAA TERM 1289 2525881 - 2525866 - T 100 -11.8 -5.52384 | TTGCGACGAAAAAAA GCGGGC CGAA GCCCGC TTGAAAGAGCGCCCA TERM 1290 2525922 - 2525888 - T 72 -11.5 -3.53761 | gap 1, opp_overlap 2525888 GAAGCCCGCTTGAAA GAGCGCCCATCGCATA CAGC CATGCGACGG-CGCCC TTCTCTCGACCTGAC Lcho_2326 2526357 - 2525938 - | hypothetical protein TERM 1291 2526071 - 2526036 - G 71 -16 -2.67441 | overlap 2526033 GAACCGACGACACCA CCGGGCCGACCGTCAG CTGG CCGCCGGCCGGCTCGG TCAGCCAGGCGAAGC TERM 1292 2526431 - 2526442 + H 79 -7.2 -4.58395 | ACGGATTTCCATTTT CGGC ACCA GCCG TTTTTCACCAATCCC Lcho_2327 2526785 - 2527405 + | hypothetical protein TERM 1293 2527425 - 2527442 + F 88 -8.3 -4.61873 | overlap 2527426 CATTCAGCCCGCCGA AGCGCCC TGAC GGGCGCA TTTTCATTTCTCGGG TERM 1294 2527426 - 2527441 + F 73 -11.8 -3.36401 | overlap 2527425 ATTCAGCCCGCCGAA GCGCCC TGAC GGGCGC ATTTTCATTTCTCGG Lcho_2328 2527692 - 2528237 + | hypothetical protein TERM 1295 2528281 - 2528296 + F 100 -10.4 -5.14965 | opp_overlap 2528281 CGGCTGATCCCAGAA GCGCCT TCCG AGGCGC TTTTTTCATGGGCAT Lcho_2329 2528400 - 2528783 + | endoribonuclease L-PSP Lcho_2330 2530383 - 2528818 - | hypothetical protein Lcho_2331 2530648 - 2530388 - | hypothetical protein Lcho_2332 2530841 - 2531227 + | DNA polymerase beta subunit Lcho_2333 2531215 - 2531625 + | hypothetical protein Lcho_2334 2533221 - 2531650 - | hypothetical protein Lcho_2335 2534845 - 2533250 - | hypothetical protein Lcho_2336 2536457 - 2534874 - | hypothetical protein Lcho_2337 2538063 - 2536486 - | hypothetical protein TERM 1296 2538360 - 2538314 - g 87 -3.5 -5.15634 | overlap 2538315 CATCTGATGAAAAAA CTGGCCCTCGC-GGCCGTGCTGG CCA CCGGCGCTGCCAGC-AGCGCCAT GGCTGCGGACACCAA Lcho_2338 2538296 - 2538778 + | hypothetical protein TERM 1297 2538793 - 2538810 + F 74 -12.7 -3.28712 | opp_overlap 2538783 ATATAGGCGACCTGC GCCCCGT GGAC ACGGGGC TTGTGCGGCACGCCC Lcho_2339 2539047 - 2539940 + | hypothetical protein TERM 1298 2539979 - 2539942 - T 95 -14.9 -4.04295 | gap 1 GCAAGCAGAAGTAAA CGTATTCC-TGCCGCGCA GAC TGCGCGGCTCGGAAAACG GAAAATGGAAAACGG TERM 1299 2539986 - 2540019 + T 91 -16.9 -3.53811 | opp_overlap 2539986 2539992, overlap 2539992 CGGAAAACGGAAAAT GGAAAACGGCAGATC AGAT GATCTGCCGTTTTGC TTTGGGGGCCATGGG TERM 1300 2540019 - 2539986 - T 89 -16.9 -3.24879 | opp_overlap 2539986 2539992, overlap 2539992 CGGAAAACGGAAAAT GGAAAACGGCAGATC AGAT GATCTGCCGTTTTGC TTTGGGGGCCATGGG TERM 1301 2539992 - 2540013 + T 100 -14.5 -4.54727 | opp_overlap 2539986 2539992, overlap 2539986 ACGGAAAATGGAAAA CGGCAGATC AGAT GATCTGCCG TTTTGCTTTGGGGGC TERM 1302 2540013 - 2539992 - T 100 -14.5 -4.43272 | opp_overlap 2539992 2539986, overlap 2539986 ACGGAAAATGGAAAA CGGCAGATC AGAT GATCTGCCG TTTTGCTTTGGGGGC TERM 1303 2540022 - 2540041 + T 84 -15 -3.39908 | overlap 2540020 2540019 TCTGCCGTTTTGCTT TGGGGGCC ATGG GGCCCCCA TCTGTTTTGAACCGC Lcho_2340 2542754 - 2540058 - | hypothetical protein TERM 1304 2540660 - 2540642 - G 72 -3.8 -4.57073 | gap 1, overlap 2540644 CACTCGCTGCAAAAA CACGCCC TGTACC GGGCG-G CACAAACCATGCATT TERM 1305 2542865 - 2542854 - R 82 -4.4 -4.99638 | opp_overlap 2542854, overlap 2542856 AGATGTACATAAAAA CAGA CAAG TCTG TCAGCTTTTGAGGAG Lcho_2341 2544368 - 2543595 - | WecB/TagA/CpsF family glycosyl transferase Lcho_2342 2545284 - 2544361 - | glycosyl transferase family protein Lcho_2343 2546375 - 2545323 - | glycosyl transferase group 1 TERM 1306 2545778 - 2545767 - G 70 -2.2 -4.48713 | overlap 2545770 GCCAGCAATAACAAA GACC CATT GATC AGTTGGACGCACAAA TERM 1307 2545926 - 2545906 - G 73 -14.1 -3.40403 | opp_overlap 2545894 TTTTTTCTACCATAA TCTCGATCC GCA GGATCGAGA TTAGAAAACAAATCT TERM 1308 2546260 - 2546250 - G 75 -5.4 -4.55826 | CCCAAAATATGAAAA CCAA TAC TTGG CCATATTACATACTT Lcho_2344 2547638 - 2546580 - | glycoside hydrolase family protein Lcho_2345 2548394 - 2547654 - | glycosyl transferase family protein Lcho_2346 2549871 - 2548426 - | O-antigen polymerase TERM 1309 2549792 - 2549772 - G 76 -3.2 -4.65838 | overlap 2549773 TATACAGTTCAAAAA TGGCCAAG TTTTT CTTGACCC AAGAAAGCAGACTAG Lcho_2347 2551430 - 2549931 - | polysaccharide biosynthesis protein TERM 1310 2550545 - 2550555 + g 95 -4.6 -5.5208 | opp_overlap 2550545 CCACTTCAAGCAAAA GGTG CAG CGCC TTTTTTATGTTCTCC TERM 1311 2551502 - 2551517 + r 70 -6.2 -4.3255 | opp_overlap 2551502 2551501 TGGCCCGCCTATAAT TCATAG TCAT CTATGA TTTATTGATTCCGCC Lcho_2348 2552934 - 2551519 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 1312 2552957 - 2552969 + r 70 -6.3 -4.30809 | GGTTGAACTGCAGTT TTTCC TTG GGAAA TTTTCATGACTATTC Lcho_2349 2554114 - 2552990 - | GDP-mannose 4,6-dehydratase Lcho_2350 2555085 - 2554147 - | NAD-dependent epimerase/dehydratase Lcho_2351 2555838 - 2555122 - | EpsI family protein Lcho_2352 2556767 - 2555835 - | exosortase 2 TERM 1313 2556895 - 2556916 + r 93 -5.7 -5.24129 | GGGCTGCGTGTGCGG CGTGCCTGC GACA GGGGGCGCG TTTTTTCTGCACCGG Lcho_2353 2557611 - 2556964 - | hypothetical protein TERM 1314 2557938 - 2557926 - H 78 -3.3 -4.92757 | overlap 2557927 TCATCAACAAGAAAA CCGGC GGA ACCGA TCGTGGATGGGACGG TERM 1315 2558410 - 2558435 + G 72 -3.8 -4.57569 | overlap 2558411 GGAAGGCCTTGACAG TGGCGCCGGC GCGCTG GCCGACGACG TTTTTGCCAGCCTCG Lcho_2354 2558225 - 2558497 + | CopG/Arc/MetJ family addiction module antidote protein TERM 1316 2559666 - 2559687 + G 70 -2.3 -4.58395 | gap 1, opp_overlap 2559668, overlap 2559666 2559668 GCCGATATCGTTCAA G-AGCTTCTG GAC CAGAAACTGC TTTTTCCACGGTGAA Lcho_2355 2558757 - 2559701 + | hypothetical protein Lcho_2356 2559778 - 2560554 + | hypothetical protein Lcho_2357 2560551 - 2561417 + | hypothetical protein Lcho_2358 2561417 - 2562742 + | hypothetical protein TERM 1317 2562861 - 2562847 - g 80 -11.4 -4.13014 | GCGACACCCCCAAAA GCGAGC AGC GCTCGC CCGATCAGTGGACCG Lcho_2359 2562828 - 2563562 + | hypothetical protein TERM 1318 2563580 - 2563570 - f 70 -4.6 -4.4078 | overlap 2563572 TGGGGTGAACGAAAA CCGG CAC CCGA CTGGTGCATCCGACC Lcho_2360 2563727 - 2564875 + | cellulose biosynthesis protein CelD Lcho_2361 2565483 - 2564908 - | hypothetical protein Lcho_2362 2565641 - 2566807 + | hypothetical protein Lcho_2363 2568388 - 2566850 - | methyl-accepting chemotaxis sensory transducer Lcho_2364 2568950 - 2568468 - | cache type 2 domain-containing protein TERM 1319 2569098 - 2569082 - R 100 -15.1 -5.13473 | ATCAGACGCAAAAAA GCCCCGC AGA GCGGGGC TTCGAGGTCGGTGCG Lcho_2365 2570072 - 2569152 - | exopolysaccharide tyrosine-protein kinase Lcho_2366 2571534 - 2570116 - | chain length determinant protein EpsF Lcho_2367 2572366 - 2571578 - | polysaccharide export protein EpsE Lcho_2368 2573411 - 2572512 - | peptidyl-prolyl cis-trans isomerase TERM 1320 2573463 - 2573447 - R 88 -9.4 -4.59109 | CAGAGCCCGGAAAAA GTCGCC GCGGA GGCGAC AGCAAGCAGTTAAGC Lcho_2369 2574509 - 2573667 - | IclR family transcriptional regulator Lcho_2370 2574687 - 2575865 + | Propanoyl-CoA C-acyltransferase Lcho_2371 2575862 - 2577460 + | AMP-dependent synthetase and ligase Lcho_2372 2577503 - 2578519 + | TRAP dicarboxylate transporter, DctP subunit Lcho_2373 2578529 - 2580397 + | TRAP C4-dicarboxylate transport system permease DctM subunit Lcho_2374 2581271 - 2580402 - | hypothetical protein TERM 1321 2581116 - 2581098 - G 85 -13.8 -4.05026 | opp_overlap 2581098 GGCAAACGGAAAGAA GCGCCCGC CGT GCAGGCGC GCCACGCCGCTGCGT Lcho_2375 2582095 - 2581298 - | short-chain dehydrogenase/reductase SDR Lcho_2376 2582208 - 2582921 + | hypothetical protein Lcho_2377 2583824 - 2582940 - | LysR family transcriptional regulator TERM 1322 2584210 - 2584174 - g 73 -14.3 -3.28712 | GGTGCTGGTGGAGAA CCTCGGCGGCGTCAGCG GCG CGCTGGCGGCGCAGAAG GTGCTCGCAGCCCCG Lcho_2378 2583974 - 2584957 + | hypothetical protein Lcho_2379 2584987 - 2586195 + | amidohydrolase Lcho_2380 2586470 - 2587756 + | D-amino-acid dehydrogenase TERM 1323 2587868 - 2587843 - f 78 -7.5 -4.33258 | gap 1, opp_overlap 2587839 2587843, overlap 2587839 ATCGCCAAACAGAAA GCCCGCGAACCA TGA CGGTG-GCGGGC TTGCTTCCTGTGAAC Lcho_2381 2587996 - 2588295 + | transposase IS3/IS911 family protein Lcho_2383 2590357 - 2589074 - | integrase family protein Lcho_2382 2588292 - 2589179 + | integrase catalytic region Lcho_2384 2591519 - 2590698 - | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) Lcho_2385 2591582 - 2592883 + | hypothetical protein Lcho_2386 2592880 - 2593674 + | SapC family protein Lcho_2387 2595267 - 2593723 - | hypothetical protein Lcho_2388 2597090 - 2595276 - | hypothetical protein Lcho_2389 2598269 - 2597241 - | putative poly-gamma-glutamate biosynthesis enzyme Lcho_2390 2598694 - 2598266 - | hypothetical protein Lcho_2391 2599233 - 2598739 - | cyclic nucleotide-binding protein TERM 1324 2599651 - 2599615 - g 70 -10.2 -3.76482 | gap 2 GGACATCACCAAGAA CCCGCCGAAC-GCG-CAG GCG CTGGCGCTGCTCGACGAG CTGATCGGCGCGAGC Lcho_2392 2599370 - 2600641 + | hypothetical protein TERM 1325 2601436 - 2601488 + G 79 -16.8 -3.02263 | gap 1 CCTGCCGCGCCCGCC CGCCCCAGCGGCCCCTCCCGC-CCC GCAA GGGAGCGAGTCGCGCCGCTGGGGCC TCTTGCGACGCCTCT Lcho_2393 2600711 - 2601520 + | hypothetical protein TERM 1326 2601945 - 2601980 + G 71 -8.2 -4.07568 | gap 1, overlap 2601946 GCGGGTGCCGGTGGT GCGGCTGGC-GGTGG CGATCAC CCGCCTGCCGGCCGG TTTTGCCGACAGCGC Lcho_2394 2601517 - 2602140 + | ATP binding protein TERM 1327 2602264 - 2602304 + G 72 -11.7 -3.59738 | overlap 2602238 CTGCTGGCCGCACGC CTGCCGCAGCTGCGCAGCG CGG TGCTGTGCACCGGCGACGG TTTCAACGTCTGCTC Lcho_2395 2602204 - 2602725 + | hypothetical protein Lcho_2396 2602722 - 2603099 + | hypothetical protein Lcho_2397 2603822 - 2603124 - | lipoprotein releasing system, ATP-binding protein Lcho_2398 2605071 - 2603815 - | LolC/E family lipoprotein releasing system, transmembrane protein Lcho_2399 2605169 - 2606209 + | putative signal peptide protein Lcho_2400 2606211 - 2607950 + | single-stranded-DNA-specific exonuclease RecJ TERM 1328 2607981 - 2607939 - T 93 -19.9 -2.71011 | gap 1 ATGGTGGTGGAAGCA GCGGCGGCCTGAACGCCGGC GGGC GCCCGCGTTCAGGGC-CCGC AAGGCTTACGGCAGG Lcho_2401 2609144 - 2607987 - | extracellular ligand-binding receptor Lcho_2402 2609812 - 2609195 - | TetR family transcriptional regulator Lcho_2403 2611154 - 2609844 - | phenylacetate-CoA ligase Lcho_2404 2611642 - 2611190 - | phenylacetic acid degradation protein PaaD Lcho_2405 2612465 - 2611647 - | enoyl-CoA hydratase/isomerase Lcho_2406 2612601 - 2613227 + | phenylacetic acid degradation protein PaaY Lcho_2407 2614299 - 2613274 - | LacI family transcription regulator Lcho_2408 2615203 - 2614400 - | ABC transporter-related protein Lcho_2409 2616326 - 2615205 - | monosaccharide-transporting ATPase TERM 1329 2616242 - 2616196 - G 70 -2.6 -4.48713 | overlap 2616198 GTGATGAAGAAGAAA CACGTCACCAGGATCAGCCCGG CCA CCGCGCCGAGCTCGGGGCGGCG CATCAGCCGGGAGAG Lcho_2410 2617395 - 2616463 - | periplasmic binding protein/LacI transcriptional regulator TERM 1330 2617773 - 2617758 - H 85 -4.6 -5.00884 | opp_overlap 2617758 ACTTCTGTCAAAAAA CTGCAC CCGG GAGCAG TTTTCAAATAGACTC Lcho_2411 2617925 - 2618707 + | xylose isomerase domain-containing protein Lcho_2412 2618805 - 2619815 + | inositol 2-dehydrogenase Lcho_2413 2619819 - 2620754 + | RpiR family transcriptional regulator TERM 1331 2620944 - 2620887 - g 77 -14.9 -3.54424 | gap 2, opp_overlap 2620891, overlap 2620889 GGTTATCCCGTCAAA CACAGCCGCTCGCCGGCCATCCACAGC CAGTTC GCCGCGCA-GACCGGCGAGCCGCTG-G TGTACGAAAAGCTCG TERM 1332 2620943 - 2620889 - g 86 -18.6 -3.35046 | gap 1, opp_overlap 2620891, overlap 2620887 TTATCCCGTCAAACA CAGCCGCTCGCCGGCCATCCACAGC CAGTTC GCCGCGCA-GACCGGCGAGCCGCTG GTGTACGAAAAGCTC Lcho_2414 2620851 - 2621684 + | shikimate 5-dehydrogenase TERM 1333 2621689 - 2621747 + F 73 -12.3 -3.31144 | opp_overlap 2621698, overlap 2621698 2621699 ACGCCGCCTGAGCGC GGCAAGCGACCTGATCCGCCCGC-GCCGG CAC CCGGCTGCGGGCGGTTCCGATTGAT-GCG TTGTCGGCATCAAAA TERM 1334 2621698 - 2621739 + F 91 -17.9 -3.23711 | gap 1, opp_overlap 2621698, overlap 2621689 2621699 GAGCGCGGCAAGCGA CCTGATCCGCCCGC-GCCGG CAC CCGGCTGCGGGCGGTTCCGA TTGATGCGTTGTCGG TERM 1335 2621739 - 2621698 - f 91 -20.1 -2.52676 | gap 1, opp_overlap 2621689 2621698 2621699 GAGCGCGGCAAGCGA CCTGATCCGCCCGC-GCCGG CAC CCGGCTGCGGGCGGTTCCGA TTGATGCGTTGTCGG TERM 1336 2621699 - 2621738 + F 100 -21.4 -2.53905 | gap 1, opp_overlap 2621698, overlap 2621698 2621689 AGCGCGGCAAGCGAC CTGATCCGCCCGC-GCCGG CAC CCGGCTGCGGGCGGTTCCG ATTGATGCGTTGTCG Lcho_2415 2621867 - 2622769 + | hypothetical protein Lcho_2416 2622784 - 2623977 + | L-carnitine dehydratase/bile acid-inducible protein F Lcho_2417 2623979 - 2624794 + | HpcH/HpaI aldolase Lcho_2418 2624832 - 2626178 + | fumarate lyase Lcho_2419 2626274 - 2627416 + | histidine kinase Lcho_2420 2627502 - 2628233 + | glutathione S-transferase domain-containing protein TERM 1337 2628256 - 2628300 + T 93 -16.4 -3.83026 | gap 2, overlap 2628257 AGACGGCGATCAGGC CGCAGCCGTGCGCGCCTTGGCC GCC GGCC--GGCCCGCGCGGCTGCC TTTCATCTCGGCAAA TERM 1338 2628257 - 2628299 + T 100 -19.9 -2.89602 | gap 2, overlap 2628256 GACGGCGATCAGGCC GCAGCCGTGCGCGCCTTGGCC GCC GGCC--GGCCCGCGCGGCTGC CTTTCATCTCGGCAA Lcho_2421 2629188 - 2628250 - | LysR family transcriptional regulator Lcho_2422 2629299 - 2631395 + | hypothetical protein Lcho_2423 2631433 - 2632506 + | porin TERM 1339 2632549 - 2632539 - T 72 -8.2 -4.09685 | overlap 2632540 CTTCAGCGGCGAAAA CGCC ACC GGCG CGCACAGCGTCGACT Lcho_2424 2633132 - 2632521 - | NIPSNAP family protein TERM 1340 2632707 - 2632681 - G 70 -10.1 -3.74251 | gap 1 CAGATGTTGAGGAAA CGCGGCTGCTCG CCGT CGAGC-GCCGTG AAGGCGCCGACCATC Lcho_2425 2634069 - 2633272 - | shikimate dehydrogenase TERM 1341 2634114 - 2634149 + H 82 -4.2 -5.02074 | gap 1, opp_overlap 2634115 2634121 2634126, overlap 2634115 GCAGCATAGCAAATG ATGAGAACAAAATTCAA TAC TTGAATGTTGTTC-CAG TTTTTTGCACAATCG TERM 1342 2634138 - 2634126 - H 80 -4.9 -4.81814 | opp_overlap 2634115 2634114, overlap 2634121 2634115 ATGATGAGAACAAAA TTCAA TAC TTGAA TGTTGTTCCAGTTTT Lcho_2426 2634187 - 2634996 + | IclR family transcriptional regulator Lcho_2427 2635021 - 2636820 + | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein Lcho_2428 2637480 - 2636833 - | RES domain-containing protein Lcho_2429 2638202 - 2637477 - | hypothetical protein TERM 1343 2638365 - 2638396 + H 77 -15.1 -2.79796 | opp_overlap 2638342 2638380 GCTCCGGGGTGCACC CGGGCCGTCAGCG AATGTC CGCAGACGGCTCG TGTGCTGAGATGGCG TERM 1344 2638918 - 2638866 - g 76 -11.8 -3.82031 | gap 1, overlap 2638880 GCAAGCACGAGGAAA CGGCGCGCATCGAAGCCCTGCGCGC CCAG GC-CGCCGCGCTGCAGCGCACGCCG CGCCGCGCCAAGGCT Lcho_2430 2638559 - 2640445 + | thiamine biosynthesis protein ThiC Lcho_2431 2640456 - 2641559 + | FAD dependent oxidoreductase Lcho_2432 2641556 - 2641807 + | thiamine biosynthesis protein ThiS TERM 1345 2642604 - 2642630 + G 76 -11.5 -3.79251 | gap 1, opp_overlap 2642597 GCAAGCGATGGCCGT GGCCAGCACGCC GGTG GGCGGGC-GGCC TTTCCTGATCGACTG Lcho_2433 2641813 - 2642646 + | thiazole biosynthesis family protein TERM 1346 2643048 - 2643090 + G 72 -12.7 -3.57462 | gap 1 CCACCTGCCGCTGGT GGTCGATCCGATGCTGCGTG CCGG CAC-CGGCACCGGCTCGGCC TTTGCCGATGCGCTG Lcho_2434 2642668 - 2644509 + | phosphomethylpyrimidine kinase type-1 TERM 1347 2644561 - 2644596 + F 95 -16.3 -4.10612 | gap 2 GCTACAGTCACGCCT CTGCCGGCGGGTGAACG ACCT CGTTC-C-CGCCGGCAG TTTCTCGTTATGCCT TERM 1348 2645423 - 2645379 - g 85 -15.5 -3.73402 | opp_overlap 2645388 ACACGCTGCAGGAAA CCCGCCTGCTGGCACCGGCGG ATG CGGCCGGCGCCATCTATCGGG GCCGGCTGCTGCACT Lcho_2435 2644754 - 2645467 + | hypothetical protein Lcho_2436 2645587 - 2646318 + | TetR family transcriptional regulator Lcho_2437 2646474 - 2647127 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase Lcho_2438 2647157 - 2647501 + | rhodanese domain-containing protein TERM 1349 2648607 - 2648555 - g 88 -4 -5.06414 | opp_overlap 2648577, overlap 2648556 2648557 2648566 GCGCTCGAAGAAAAA TCGCGCAACGACCT-CGACACCGCCC GCC GCGCGGTGGCGCAGGCCA-CGCGGCA GGTCTACTTCGGCGT Lcho_2439 2647556 - 2648887 + | TolC family type I secretion outer membrane protein Lcho_2440 2649991 - 2648900 - | hypothetical protein Lcho_2441 2650370 - 2650101 - | thiamineS protein Lcho_2442 2651764 - 2650448 - | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein Lcho_2443 2653197 - 2651779 - | phosphomannomutase Lcho_2444 2653465 - 2653818 + | hydrogenase nickel insertion protein HypA Lcho_2445 2653822 - 2654793 + | hydrogenase accessory protein HypB TERM 1350 2655652 - 2655678 + G 84 -19.4 -2.72344 | ATCGACCCGGCCAAT GCCCGCGCCGTG TCG CACGGCGCCGGC TCGTTCCACCTCGCG Lcho_2446 2654797 - 2655984 + | hydrogenase maturation protein HypF Lcho_2447 2655987 - 2656250 + | hydrogenase assembly chaperone hypC/hupF Lcho_2448 2656247 - 2657386 + | hydrogenase expression/formation protein HypD Lcho_2449 2657383 - 2658438 + | hydrogenase expression/formation protein HypE TERM 1351 2658686 - 2658714 + G 71 -15.2 -3.06796 | TGCCTGATCGTGCAT CCCGGCCCGCCG GGTGA TGGCGGGCCGGC TTCGCTCGACTGGGC Lcho_2450 2658464 - 2660236 + | formyl transferase domain-containing protein Lcho_2451 2662829 - 2660289 - | multi-sensor hybrid histidine kinase Lcho_2452 2663979 - 2662846 - | response regulator receiver modulated metal dependent phosphohydrolase Lcho_2453 2664858 - 2664055 - | enoyl-CoA hydratase/isomerase TERM 1352 2664105 - 2664095 - G 71 -8.2 -4.15044 | opp_overlap 2664096, overlap 2664096 CGTTTTTCGAAGAAA GCCG TCA CGGC CTCGGCGTGGTCGGC Lcho_2454 2665857 - 2664994 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Lcho_2455 2666670 - 2665915 - | short-chain dehydrogenase/reductase SDR Lcho_2456 2667926 - 2666727 - | hypothetical protein Lcho_2457 2669761 - 2667980 - | dihydroxy-acid dehydratase TERM 1353 2669822 - 2669798 - R 86 -14.2 -3.74347 | opp_overlap 2669813, overlap 2669791 2669799 GCCAGAAAGGGGAAA GGCGGCGCGG GCCAG CCGCGCCGCT CATGCGCGGTTTACT TERM 1354 2669821 - 2669799 - R 87 -17.7 -2.84126 | opp_overlap 2669813, overlap 2669798 2669791 CCAGAAAGGGGAAAG GCGGCGCGG GCCAG CCGCGCCGC TCATGCGCGGTTTAC Lcho_2458 2670843 - 2669833 - | TRAP dicarboxylate transporter, DctP subunit TERM 1355 2670951 - 2670966 + H 75 -3.2 -4.7373 | overlap 2670953 TAGGACTGCGACCGG CATGAG TCCA CTCAAG TTTTTGCTAGCATCG Lcho_2459 2671031 - 2671963 + | LysR family transcriptional regulator Lcho_2460 2673592 - 2672009 - | aldehyde dehydrogenase TERM 1356 2673727 - 2673748 + r 70 -5 -4.4078 | overlap 2673709 2673726 GCCCGGCCCTCACTC GCCCCGGT AGACCG GCCGGCGC TTTTCCTTGAAGGCG Lcho_2461 2674500 - 2673721 - | enoyl-CoA hydratase/isomerase Lcho_2462 2674939 - 2674577 - | hypothetical protein Lcho_2463 2675523 - 2675065 - | hypothetical protein TERM 1357 2675320 - 2675297 - G 74 -9.5 -4.07687 | overlap 2675277 ACGGTGTCGGCAAAA CCGGCCGAC ACGCCG GCCAGCCGG GCGGCATCGAACGGG Lcho_2464 2677408 - 2675558 - | ATPase central domain-containing protein Lcho_2465 2678132 - 2677422 - | phage shock protein A, PspA TERM 1358 2678169 - 2678191 + r 75 -14.8 -2.72463 | opp_overlap 2678162 CGGCGAAACGGGGAC GGGCCGGCGA CGA TCGCCGACCC TACTTGCGGATGAAT Lcho_2466 2679069 - 2678191 - | hypothetical protein Lcho_2467 2680642 - 2679071 - | extracellular solute-binding protein TERM 1359 2679296 - 2679314 + g 75 -12.4 -3.68222 | opp_overlap 2679296 CAGGTAGTCGATGAA CAGGTGCG CCT CGCGCCTG TTCTTCGCGTTGGCC Lcho_2468 2681163 - 2680678 - | hypothetical protein TERM 1360 2680863 - 2680897 + g 77 -14.9 -3.48276 | gap 1 GGGCCTGCGCGAAGT CGCCCGCGGCGAGCCG CTGG CGGCCCGCCTCGG-CG TTCTGTGCGACCGAC TERM 1361 2681043 - 2681071 + g 75 -12.4 -3.61398 | gap 1, opp_overlap 2681033 ACACAGGTGCCGGCG CCGTGCTGGCCGC GGGC GCGCCCAGC-CGG TTCTTCAGCACCAGG Lcho_2469 2681830 - 2681168 - | putative methyl-accepting chemotaxis sensory transducer TERM 1362 2681246 - 2681303 + g 72 -16.2 -2.83403 | gap 1, overlap 2681214 2681246 GGTCTGCGCCAGGCT CGCCACCTGCTGGG-CGGTCTGCTGGC GGGCG GCCTGCAGGCCGGCCTCGTGCGTGGCG GTTTCCTGCGCCGAG TERM 1363 2681757 - 2681801 + g 70 -12.6 -3.29461 | TGCGGTGGTGCGTCG GGCGGGGCCGGCTGCGCCGG TGCAT CCCGCGTGACCAGACCCGCC TTCTCCAGAAAGTTC TERM 1364 2681914 - 2681959 + r 76 -9.6 -4.11692 | gap 1, opp_overlap 2681900 2681903 AGAACCCGTGCGGCC CGCCGTCTGGCGGCGCAGGGC GCGCG GGCGTGCGC-GTCAGGCGGGG TTTTCGCCGTGGGTC Lcho_2470 2684109 - 2681950 - | diguanylate cyclase with PAS/PAC sensor TERM 1365 2684402 - 2684458 + G 71 -14.5 -3.01712 | gap 3, opp_overlap 2684393, overlap 2684455 AGGATACGCTGCCGA GCCGGGTC--GAGGTCGG-CAGCGCGCA ACCC TTCGCGCTGGCCGACTGCAAGGCCCGGC TGTTCGACGGCGCAC TERM 1366 2686123 - 2686065 - g 79 -5.6 -4.61231 | overlap 2686055 CGACAGCGCGAAAAA GCGCCAGGACCTGCCCGAGGCCGAACTC GAC GACGCCGGCCACGCCGAGGTCGCGGTGC CGGTCGACGTGGCGC TERM 1367 2687090 - 2687102 + G 70 -4.8 -4.44667 | overlap 2687084 CGCGCCATGCGAGCC CCGA CCCGC TCGG TTTCTTCTTCGGCAA TERM 1368 2689212 - 2689252 + G 73 -14.5 -3.25896 | overlap 2689211 ATACCGCGACGACCG CTTCGTGCTGGCCGCCGAC CTC GACGGCCGCCGGCTCGACG TCTTCTACCTCGTGC Lcho_2471 2684299 - 2689392 + | alpha-2-macroglobulin domain-containing protein TERM 1369 2690441 - 2690459 + G 71 -8.8 -4.0371 | CGCGGTGCGCTCGCC CGGCTCGA CGC TCAAGCCG TTTCTGTACGCGATG Lcho_2472 2689389 - 2691788 + | penicillin-binding protein 1C Lcho_2473 2693030 - 2691834 - | cobalamin B12-binding domain-containing protein Lcho_2474 2694534 - 2693194 - | ferric reductase domain-containing protein TERM 1370 2693802 - 2693755 - G 70 -14 -3.14132 | gap 1 GTCGGTGGTCACGAA GGCGAACTGGCCGGCGGCGTGGC CGG GCCA-GCCGTCGGCCAGCGTGAC GCGGGACTCGAGCAC TERM 1371 2694153 - 2694103 - G 70 -13 -3.28712 | opp_overlap 2694103 2694149 2694150 CGCGGCGGCGTAGAA GGCCCACTCGCCGACCGTCTCGGC CAG GCCGCGCTGGCTGCCGAGCAGGCC TTCGATCAGGCCCTT Lcho_2475 2694687 - 2696105 + | histidine kinase Lcho_2476 2696102 - 2696827 + | two component transcriptional regulator Lcho_2477 2697852 - 2696875 - | ribokinase-like domain-containing protein Lcho_2479 2700084 - 2698768 - | glucose/sorbosone dehydrogenase-like protein Lcho_2478 2697989 - 2698867 + | hypothetical protein TERM 1372 2699461 - 2699428 - Gf 76 -13.9 -3.15544 | GCCGACGCCGACGAA CAGCTTGCTGCCG TCCGCGCT CGGCAGCAGGCTG CGGGTCCAGTGCCCG Lcho_2480 2700285 - 2702825 + | PAS/PAC sensor hybrid histidine kinase Lcho_2481 2702835 - 2703185 + | hypothetical protein Lcho_2482 2704678 - 2703221 - | hypothetical protein Lcho_2483 2705424 - 2704675 - | hypothetical protein Lcho_2484 2707080 - 2705479 - | galactarate dehydratase TERM 1373 2707582 - 2707528 - g 93 -17.7 -3.78934 | opp_overlap 2707536 2707537 2707572, overlap 2707525 CGTGGTCGAGAACAA GGCCGGCGCCGGCG-GCACGGTCGGCG CGG CGCAGGCCAAGCGCGC-GGCGCCGGAC GGCTACACGATCTTC Lcho_2485 2707337 - 2708299 + | hypothetical protein Lcho_2486 2708431 - 2709834 + | beta-lactamase domain-containing protein TERM 1374 2709976 - 2709958 - g 71 -6.6 -4.25458 | overlap 2709945 2709962 AACTCGACCAAGAAA GCCATCGC CGA GCGACTGC CGGAAATCGACGTGG Lcho_2487 2709913 - 2710899 + | GTP-binding protein HSR1-related Lcho_2488 2711413 - 2712894 + | hypothetical protein Lcho_2489 2713597 - 2712977 - | GTP cyclohydrolase II Lcho_2490 2713824 - 2714486 + | 3-oxoacid CoA-transferase, A subunit Lcho_2491 2714479 - 2715138 + | 3-oxoacid CoA-transferase, B subunit Lcho_2492 2715226 - 2716071 + | hypothetical protein Lcho_2493 2716068 - 2716592 + | NAD(P)H dehydrogenase (quinone) Lcho_2494 2717061 - 2716597 - | hypothetical protein Lcho_2495 2717373 - 2717137 - | hypothetical protein Lcho_2496 2718373 - 2717456 - | ribose-phosphate pyrophosphokinase Lcho_2497 2719899 - 2718370 - | thymidine phosphorylase TERM 1375 2719425 - 2719483 + g 87 -20.2 -3.14132 | overlap 2719469 AGTCGAGCCGGCGGC CGGCGGCGATCATGGCCTCGGTGAGGTG CAG CACCTCGTCGCGGTCGAGGTCGTAGCCG TTGGTGGCGACCACG Lcho_2498 2720721 - 2719936 - | general secretion pathway protein B Lcho_2499 2722413 - 2720725 - | peptidoglycan binding domain-containing protein TERM 1376 2721565 - 2721607 + g 75 -12.7 -3.62046 | gap 2 ATCGGCGGCACGGCG GGCGGCGCGCTGGGCGGCGTC GTC GAAGAC-CTCA-CGCGCCGCC TTCTTCACCACCTCG Lcho_2500 2722662 - 2722970 + | hypothetical protein Lcho_2501 2722967 - 2724790 + | SSS family solute/sodium (Na+) symporter TERM 1377 2724813 - 2724832 + F 100 -16.4 -5.32944 | opp_overlap 2724813 CTGGTCCAATGAAAA GGCCGGGC GCAA GCCCGGCC TTTTTTCATTGTCCG TERM 1378 2724832 - 2724813 - f 100 -16.4 -4.4078 | opp_overlap 2724813 CTGGTCCAATGAAAA GGCCGGGC GCAA GCCCGGCC TTTTTTCATTGTCCG TERM 1379 2726123 - 2726099 - g 71 -6.4 -4.25104 | gap 1, overlap 2726052 2726100 CCGCGCGCACGAAAA GGGGCTCGAGC TGGT GCTCGA-CACC GACCACCTGCCGCGC TERM 1380 2727444 - 2727390 - g 70 -2.7 -4.58663 | gap 2, opp_overlap 2727411, overlap 2727391 2727393 ATGACCCCGGAAAAA CCAGCCGACCG-CGAC-GCGACACCCG GTT CGGGTTTCGCAGCCATCGAGGGCCTGA ACATCCAGACCGGCC Lcho_2502 2724957 - 2727830 + | multi-sensor hybrid histidine kinase Lcho_2503 2728461 - 2727805 - | exonuclease RNase T and DNA polymerase III Lcho_2504 2730296 - 2728458 - | CBS domain-containing protein TERM 1381 2728874 - 2728908 + g 76 -7.2 -4.36914 | gap 2, overlap 2728877 CTTCGTTGAAGGCGT CGA-TCGCGGC-GACG AAACG CGTCAGCAGCGAATCG TTTTCTCCGACCAGC TERM 1382 2729310 - 2729265 - G 80 -17.6 -3.21099 | gap 1, opp_overlap 2729250, overlap 2729267 GCTGCCCATCACGAA CAGGCAGCTGTTGGCGACCAG ATCGG CCGG-CGCCACCAGCTGCCAG GCACGCTCGAACAGC TERM 1383 2729308 - 2729267 - G 86 -18.8 -3.17051 | gap 1, opp_overlap 2729250, overlap 2729265 TGCCCATCACGAACA GGCAGCTGTTGGCGACCAG ATCGG CCGG-CGCCACCAGCTGCC AGGCACGCTCGAACA TERM 1384 2729508 - 2729493 - G 78 -2.5 -4.82901 | overlap 2729503 GTGGTTCGACAAAAA GCTCA GCAGAT CGAGC TGTTCGAGCACGCCC Lcho_2505 2732641 - 2730335 - | DNA ligase, NAD-dependent TERM 1385 2732025 - 2732004 - G 79 -13.7 -3.66178 | gap 1 CGCCCCAAGGCGAAA CGC-GCCCCC TCG GGGGGCAGCG AGTGCGCATCAGCGC TERM 1386 2732280 - 2732268 - G 71 -6.9 -4.25283 | overlap 2732272 ACCCGCGCATCAAAA GCGAC CGC GCCGC TGGCCTCGGTGTCGG Lcho_2506 2732857 - 2733465 + | hypothetical protein Lcho_2507 2734533 - 2733490 - | radical SAM domain-containing protein Lcho_2508 2734659 - 2736554 + | hypothetical protein Lcho_2509 2737083 - 2736586 - | putative thiol-disulfide isomerase and thioredoxin TERM 1387 2736643 - 2736628 - G 72 -3.2 -4.57073 | CACCTTCCTGAAAAA CTCGAA GATC CCCGAG TCGCCCATCCGCCTC Lcho_2510 2739534 - 2737168 - | helicase c2 TERM 1388 2737745 - 2737687 - G 89 -10.9 -4.58283 | GAAGCTGCTGAAAAA CGCCAGGTAGTTGC-CCGGCCGCTCGGCA TAC TGACGCGCGATCAGCGCGACCACC-GGCG CCAGCGAGGCGCTGC TERM 1389 2738630 - 2738600 - G 72 -3.1 -4.56775 | gap 1, overlap 2738601 AGGCGGTCGTAAAAA CCTTCGGCGAG-CG GGCA CGACTCGCCGTTGC AAGCCTTGTCGGGGT TERM 1390 2738881 - 2738833 - G 100 -8.8 -5.75342 | gap 2, opp_overlap 2738866, overlap 2738836 2738877 GGCGGTCAAAAAAAA CAC-CCGGTCCAGCCGCTC-GGGC ATG GCCTTGAGCAGCGGGAACAGCGTG CCCACCGTCTTGCCG TERM 1391 2738983 - 2738952 - G 79 -17.2 -3.04144 | GCGCGACCTTGAACA CCGCCTCGGCGAGC GCGC GCTGGCCGTGGCGG AAGGTGGCGTGCGGA Lcho_2511 2740289 - 2739540 - | beta-lactamase domain-containing protein TERM 1392 2740732 - 2740768 + G 71 -8.6 -4.07568 | gap 1 GGTGGCGGTGGACGA CGACCGCA-AGCCGGTG GCGG TGCCGGCGCTGCGGCCG TTTTCGCCCGACGAG Lcho_2512 2740388 - 2740891 + | thioesterase superfamily protein Lcho_2513 2742026 - 2740914 - | ZipA FtsZ-binding region TERM 1393 2741317 - 2741287 - G 79 -13.3 -3.72695 | gap 1 ACGCCGTGCACGAAA CCGTGGCGCGCGGC GTGC ACCGC-CACCACGG CGACCGGCCAGGCCG Lcho_2514 2745597 - 2742085 - | chromosome segregation protein SMC TERM 1394 2743228 - 2743251 + g 75 -12.4 -3.63515 | GCGGGCGTCGGACAG GCGGCGATCG GCGG CGATCACCGC TTCTTCCAGCTCGGC TERM 1395 2745321 - 2745340 + g 70 -12.8 -3.30124 | ACTGGTTCCACTGGC CGCCGGCG CGCG CGCTGGCG TTGTCGAAGATCAGC Lcho_2515 2745658 - 2746881 + | aminotransferase class I and II TERM 1396 2747279 - 2747223 - g 87 -20 -3.18264 | opp_overlap 2747255 GGCGGCATGGACGAA GCCGCGCTGCG-CGCCACCGGCGTGCGC GTG GTGC-CGCCGGCCGTGGCGCGGCGCGGC AGCTTCATCGCCCGC Lcho_2516 2746932 - 2747756 + | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Lcho_2517 2747788 - 2749002 + | twitching motility protein TERM 1397 2749131 - 2749159 + G 75 -13.8 -3.57144 | GCCGGCTGTCAGGCG CTGATCGCCGCC CGCCT GGCGGCGCTCGG TTTCGAGATCCACGC Lcho_2518 2749050 - 2750198 + | succinyl-diaminopimelate desuccinylase Lcho_2519 2750195 - 2751154 + | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific TERM 1398 2751300 - 2751282 - g 71 -6.7 -4.26076 | gap 1, overlap 2751283 CTATTCCTACGAAAA GCGCCAGC GCGA GCTGGC-C AAGAAGCGCAAGAAC Lcho_2520 2751253 - 2751444 + | hypothetical protein TERM 1399 2751482 - 2751498 + T 89 -10.8 -4.5442 | opp_overlap 2751482, overlap 2751477 GGCGATTTGACGAGA CCGCGC CTTGA GCGCGG TTTTGTCATTCAGCG Lcho_2521 2752620 - 2751508 - | phospho-2-dehydro-3-deoxyheptonate aldolase Lcho_2522 2752732 - 2752956 + | RNA-binding S4 domain-containing protein TERM 1400 2753271 - 2753236 - g 70 -15.4 -2.92192 | gap 1, overlap 2753231 2753245 CCGCACGCAATGACA GCGCAGCAA-CGCCCGC CAA GCCGGCGCCTGCCGCGC AGCCGGGCCAGCAAG Lcho_2523 2753100 - 2754101 + | import inner membrane translocase subunit Tim44 TERM 1401 2754144 - 2754159 + F 100 -11.8 -5.60993 | opp_overlap 2754144 AGACTCACCCCGAAA CGGCGC CAAG GCGCCG TTTTTTTGTGCCCGG TERM 1402 2754159 - 2754144 - f 77 -11.8 -3.57971 | opp_overlap 2754144 AGACTCACCCCGAAA CGGCGC CAAG GCGCCG TTTTTTTGTGCCCGG Lcho_2524 2754269 - 2754556 + | hypothetical protein Lcho_2525 2754556 - 2754957 + | hypothetical protein Lcho_2526 2755096 - 2755914 + | MscS mechanosensitive ion channel TERM 1403 2755984 - 2756001 + F 77 -12.7 -3.35278 | ACACTGCGCCGCGCA CGCCCCA TCCG TGGGGCG TTGCTGTCTCGTTCA Lcho_2527 2756282 - 2757790 + | DEAD/DEAH box helicase domain-containing protein TERM 1404 2757827 - 2757842 + T 100 -11.8 -5.4833 | TCAACACACTTCGAA CCGGCC TCTG GGCCGG TTTTTTATTGCCTGG Lcho_2528 2759300 - 2757873 - | histidine kinase Lcho_2529 2760026 - 2759328 - | two component transcriptional regulator TERM 1405 2759647 - 2759624 - G 71 -8.8 -4.08216 | gap 1, opp_overlap 2759644, overlap 2759627 CGAGTCCGTCGAAAA CGAGCGGGGTC GTG GACACCGC-CG CCGCTGCCGGCGCGG TERM 1406 2760076 - 2760050 - R 100 -17.3 -4.14243 | GATCCCATGCGAAAA GGCGGCGAGCC TCGTC AGCTCGCCGCC CGTGCCACGGTCCAG Lcho_2530 2760649 - 2760101 - | hypothetical protein Lcho_2531 2761401 - 2760784 - | CDP-alcohol phosphatidyltransferase Lcho_2532 2762257 - 2761394 - | hypothetical protein Lcho_2533 2763183 - 2762254 - | hypothetical protein Lcho_2534 2763495 - 2763208 - | putative signal peptide protein TERM 1407 2764021 - 2764039 + G 74 -7.3 -4.30576 | TGCGTCGAACATCTG CCCGGCC AGCAA GGCCAGG TTTTCATGATGCGCG Lcho_2535 2763640 - 2764209 + | ECF subfamily RNA polymerase sigma-24 factor Lcho_2536 2764215 - 2764409 + | hypothetical protein Lcho_2537 2765370 - 2764414 - | 2-nitropropane dioxygenase NPD Lcho_2538 2767160 - 2765370 - | acyl-CoA dehydrogenase domain-containing protein TERM 1408 2767193 - 2767224 + r 100 -15.2 -4.47873 | gap 1, opp_overlap 2767195, overlap 2767195 GTCTTCAGATGGAAC AAGGGCGCCGCAACC GAT GGTTG-GGCGCCCTC TTTTCTCGGTGTTGT TERM 1409 2767222 - 2767195 - R 93 -17.8 -3.70773 | gap 1, opp_overlap 2767193 2767195 CTTCAGATGGAACAA GGGCGCCGCAACC GAT GGTTG-GGCGCCC TCTTTTCTCGGTGTT TERM 1410 2767195 - 2767222 + r 95 -17.8 -3.83791 | gap 1, opp_overlap 2767195, overlap 2767193 CTTCAGATGGAACAA GGGCGCCGCAACC GAT GGTTG-GGCGCCC TCTTTTCTCGGTGTT Lcho_2539 2768207 - 2767281 - | electron transfer flavoprotein alpha subunit Lcho_2540 2768959 - 2768210 - | electron transfer flavoprotein alpha/beta-subunit Lcho_2541 2769149 - 2769967 + | glutamate racemase TERM 1411 2770189 - 2770172 - T 100 -12.7 -5.56673 | opp_overlap 2770172 ACTGACAACAAAAAA GCCGTCG TTTC CGACGGC TTCTTGAATCTGGAG TERM 1412 2770172 - 2770189 + T 84 -12.7 -3.70773 | opp_overlap 2770172 ACTGACAACAAAAAA GCCGTCG TTTC CGACGGC TTCTTGAATCTGGAG TERM 1413 2770438 - 2770420 - T 100 -5.3 -5.5604 | opp_overlap 2770420, overlap 2770413 CCAACCAACAAAAAA GGAAGCT ATTTG AACTTCC TCTTCTGCGAACTGG Lcho_2542 2773048 - 2770631 - | ATP-dependent protease La TERM 1414 2773137 - 2773101 - R 71 -12.2 -3.21807 | gap 1, opp_overlap 2773104, overlap 2773099 2773094 CCATGAAATGCAAGA GCGGCCGACGCGGCACC CGGA GGTGG-GCGCCGGCTGC TGTCCGACCCTGCGG Lcho_2543 2774441 - 2773167 - | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 1415 2774378 - 2774426 + g 91 -2.3 -5.24531 | overlap 2774370 2774367 2774414 TCTTGACCTCGTGCT GGCTCTTTCCGCAGAACGAGC AGTACAA GATCTTTTCGCCGGAGGAGCC TTTTTTCTCGGGCAT Lcho_2544 2775088 - 2774480 - | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 1416 2775226 - 2775208 - R 93 -17.4 -3.34962 | CCCCAGATGTGACAA GGGGCGCC CTG GGCGCCCC TCGAATCCAGGAATG Lcho_2545 2776566 - 2775259 - | trigger factor Lcho_2546 2779978 - 2776835 - | acriflavin resistance protein TERM 1417 2777331 - 2777302 - G 70 -4.1 -4.35461 | TGAAGATGATGAAAA GCATGATCGGCAC GCCC GCGGCGATCGAGC CCTGGCCCTTGGCGC TERM 1418 2777391 - 2777404 + g 78 -2.3 -4.81249 | overlap 2777392 2777401 GAATAACCCGGCGGC ATGCG TTCG CGCAG TTTTTGCATTTCGGG TERM 1419 2778004 - 2778020 + g 72 -3.6 -4.56597 | GGCGCTTGCGCAAGG CCTCGC GCTCG GCCAGG TTTTTCGGCAGCACG Lcho_2547 2781191 - 2780010 - | RND family efflux transporter MFP subunit Lcho_2548 2781333 - 2782163 + | squalene synthase HpnC TERM 1420 2782288 - 2782274 - g 78 -11.4 -3.96624 | TATGTGCAGGAGAAA GCCGCT GGC AGCGGC TCGAGCTTCTATTAC Lcho_2549 2782244 - 2783080 + | squalene synthase HpnD Lcho_2550 2783070 - 2784368 + | squalene-associated FAD-dependent desaturase TERM 1421 2784777 - 2784760 - T 100 -10.5 -5.43414 | opp_overlap 2784760 ACCAGACACAAAAAA GCCGACC CCAA GGCCGGC TTCGATCACCCCTCC Lcho_2551 2785409 - 2784828 - | superoxide dismutase TERM 1422 2785133 - 2785164 + g 70 -13.6 -3.18681 | gap 1 CGATGGCCGCGGCCA GCGCACCGGTCGGCG CGG CGCCG-CCGGCGGGC TTCATGCAGTTCCAG Lcho_2552 2786859 - 2785561 - | exodeoxyribonuclease VII, large subunit TERM 1423 2785615 - 2785587 - G 79 -15.9 -3.29144 | CCATGGCGGGCAGAA CGGCCTCGACGAC GCT GTCGACGCGGCCG TCCTGCAGCACCGCG Lcho_2553 2787315 - 2787893 + | MotA/TolQ/ExbB proton channel Lcho_2554 2787890 - 2788315 + | biopolymer transport protein ExbD/TolR TERM 1424 2789057 - 2789096 + G 74 -9.8 -4.15788 | opp_overlap 2789035 2789052, overlap 2789058 CCGAACTGAAGCGGC AGCCGGTGCTGGCCAGTG CCGG CATCGGCCAGCCCGGGCG TTTCTTCGACAGCTT Lcho_2555 2788312 - 2789358 + | tetraacyldisaccharide 4'-kinase Lcho_2556 2789410 - 2789613 + | hypothetical protein Lcho_2557 2789610 - 2790425 + | 3-deoxy-D-manno-octulosonate cytidylyltransferase Lcho_2558 2790611 - 2791264 + | nucleoside-triphosphate--adenylate kinase TERM 1425 2791289 - 2791304 + F 100 -11.8 -5.00616 | CGACACGACGATCGA GCCGCC TGCG GGCGGC TTTTTTGCGCCGACC TERM 1426 2791552 - 2791575 + G 73 -15.2 -3.17763 | GAGCGCGGCCAGCAG GTCGCCGCCG AGAT CGGCGGCGCC TTCGTGCGCTGTGAC Lcho_2559 2791420 - 2792178 + | short-chain dehydrogenase/reductase SDR TERM 1427 2793832 - 2793883 + G 81 -15.9 -3.53012 | overlap 2793834 CCAGCAGGCCATCGC GCTGCCCAACTTCG-GCACCACCGG CGGC CCGGTGCTGCTCGAAGCCGGGC-GC TTTCCACCCGCCACA TERM 1428 2793834 - 2793882 + G 72 -16 -2.71712 | gap 1, overlap 2793832 AGCAGGCCATCGCGC TGCCCAACTTCG-GCACCACCGG CGGC CCGGTGCTGCTCGAAGCCGGGCG CTTTCCACCCGCCAC Lcho_2560 2792237 - 2794036 + | gamma-glutamyltransferase TERM 1429 2794556 - 2794589 + G 90 -17.4 -3.60792 | gap 1 TTTCGGCCTCGGCTA CGCGC-CGCCCGGCC ACCAC GGCCTGGCGAGCGCG TTTGCACGTTACGAC Lcho_2561 2794080 - 2795876 + | DNA primase Lcho_2562 2796202 - 2798466 + | RNA polymerase, sigma 70 subunit, RpoD TERM 1430 2798513 - 2798530 + F 100 -14.1 -4.89567 | ATCCCCTTGCCTGAA GGCCCGG TTCA CCGGGCC TTTTGTCTTTTGAGA TERM 1431 2799399 - 2799432 + G 82 -18.9 -2.64616 | gap 1 GAGGTGGTGACGCTG CGCCGCGGCGCCTGCA CGC TGCACG-GCCGCGGCG TGATCTGCATGGGCG Lcho_2563 2798595 - 2799527 + | adenylate/guanylate cyclase Lcho_2564 2800241 - 2799546 - | HAD family hydrolase Lcho_2565 2800311 - 2801417 + | ferrochelatase TERM 1432 2801451 - 2801423 - T 89 -18.2 -2.8092 | gap 1, overlap 2801413 CAAGACCTGATCACA CCGGCCGC-GCAG CAGG CTGCTGCGGCCGG CGCAGACACGCTCAG Lcho_2566 2802386 - 2801463 - | porin TERM 1433 2802549 - 2802531 - R 72 -11.6 -3.55603 | overlap 2802529 AACGGGGAAAGAAGA CGGGCCCG GAC CGGGTCCG GTGGTCGCCCGCCCG Lcho_2567 2804056 - 2802569 - | hypothetical protein TERM 1434 2803721 - 2803760 + g 87 -16.4 -3.65522 | gap 1, opp_overlap 2803709 2803706 CGAGCCGATCGCGGC GGTGGCCA-GCGCGGCCCC GGC GCGGCCGCTCTTGGCCATC TTGTTGCCCTCCATG Lcho_2568 2804550 - 2804056 - | hypothetical protein Lcho_2569 2805511 - 2804552 - | hypothetical protein Lcho_2570 2805636 - 2806304 + | two component transcriptional regulator Lcho_2571 2806319 - 2807788 + | histidine kinase Lcho_2572 2807785 - 2808246 + | RNA-binding S4 domain-containing protein Lcho_2573 2809864 - 2808293 - | hypothetical protein Lcho_2574 2810812 - 2809913 - | hypothetical protein Lcho_2575 2811002 - 2811547 + | GrpE protein Lcho_2576 2811673 - 2813613 + | chaperone protein DnaK TERM 1435 2813665 - 2813610 - f 74 -10.2 -3.75598 | gap 1, opp_overlap 2813617 2813620 2813663, overlap 2813616 2813617 CAAGGAAGTCAAGAA GTGAAATGCGCCGGTGCGGTGCGGCCC CTC GGGGCGCACCGT-CCGGTGGTCTTCGC CGCGTGCGGGAGAGG TERM 1436 2813617 - 2813658 + F 85 -16.5 -3.02511 | gap 1, opp_overlap 2813616 2813610 2813617, overlap 2813620 GTCAAGAAGTGAAAT GCGCCGGTGCGGTGCGGCCC CTC GGGGCGCACCGT-CCGGTGG TCTTCGCCGCGTGCG TERM 1437 2813620 - 2813655 + F 90 -19 -2.73994 | gap 1, opp_overlap 2813617 2813616 2813610, overlap 2813617 AAGAAGTGAAATGCG CCGGTGCGGTGCGGCCC CTC GGGGCGCACCGT-CCGG TGGTCTTCGCCGCGT Lcho_2577 2813742 - 2814899 + | chaperone protein DnaJ TERM 1438 2814928 - 2814947 + TF 100 -15 -4.3467 | CATGCCCGCATCGGA CGGCCACC TGCG GGTGGCCG TTTTCATGTGCGGGT Lcho_2579 2817985 - 2816708 - | L-carnitine dehydratase/bile acid-inducible protein F Lcho_2578 2815038 - 2816771 + | response regulator receiver protein TERM 1439 2817651 - 2817689 + gF 84 -13.9 -3.68222 | gap 2 CGCCGCACCAGCGCC GCGC-CGGCCG-GATCGGC CAG GTCGATCGCGACCGAGCGC TTGTTGCGGTTGGCA TERM 1440 2817741 - 2817714 - Gf 73 -6.1 -4.38927 | opp_overlap 2817730, overlap 2817716 TTGGCACAGAAGAAA TAGGCCGCGTC GCTCGT GTCGCGGCCCT CGGCATCCTTGAGCC TERM 1441 2817739 - 2817716 - Gf 77 -10.9 -3.79864 | opp_overlap 2817730, overlap 2817714 GGCACAGAAGAAATA GGCCGCGTC GCTCGT GTCGCGGCC CTCGGCATCCTTGAG TERM 1442 2818172 - 2818154 - fH 100 -6.6 -5.53288 | overlap 2818157 TCGAACTGAAAAAAA CATGCCGC CAT GCGACTTG CCGATCGGTCGGGCG TERM 1443 2819186 - 2819133 - g 75 -14.4 -3.53012 | GCGCGGCGCTGGAAA CCCGGC-TCGCAGGCCGGGGCGCCGG CGGA CCGCCGCCTCGTCC-ACGTCGCCGGG GCGGGATCGTGAAGA Lcho_2580 2818194 - 2819198 + | extracellular solute-binding protein Lcho_2581 2819195 - 2822395 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Lcho_2582 2822441 - 2823337 + | phosphotransferase domain-containing protein Lcho_2583 2823375 - 2824307 + | hypothetical protein TERM 1444 2824553 - 2824516 - g 75 -14.7 -3.41051 | overlap 2824517 CCAGCTCGACGACAA GGCCGCCGCCGACGCGC TGCG GCGCATCCGCGGCGTCG ACGACAAGCACCACC TERM 1445 2824552 - 2824517 - g 78 -18.2 -2.64416 | overlap 2824516 CAGCTCGACGACAAG GCCGCCGCCGACGCGC TGCG GCGCATCCGCGGCGTC GACGACAAGCACCAC Lcho_2584 2824376 - 2825002 + | Sua5/YciO/YrdC/YwlC family protein Lcho_2585 2825026 - 2825526 + | ybaK/ebsC protein TERM 1446 2825898 - 2825915 + G 70 -12.7 -3.42069 | overlap 2825896 GCCTGGCGGCCTTTG CCGGCCA CGTC TGGCCGG TGTTCTTCAAGTTCA Lcho_2586 2825576 - 2826367 + | hypothetical protein Lcho_2587 2826439 - 2826825 + | glutaredoxin Lcho_2588 2827914 - 2826856 - | aldo/keto reductase Lcho_2589 2828193 - 2829320 + | response regulator receiver modulated metal dependent phosphohydrolase TERM 1447 2833733 - 2833787 + G 76 -17.2 -2.71144 | gap 4 CCGGTTCTGGTTCAC CGCGCGGCTGCAGCGCGCGGCCGGCGGC GGC GCC-CCGGCCGT-CGTCGC-GCCG-GCG TGGTTGACGGGCATG Lcho_2590 2829378 - 2835257 + | multi-sensor hybrid histidine kinase Lcho_2591 2837971 - 2835284 - | multicopper oxidase type 2 TERM 1448 2837949 - 2837939 - G 72 -3.2 -4.56597 | overlap 2837941 CGGGTCGCCGAAAAA GTCC AGC GAAC CGGTCGACTGCGCAA TERM 1449 2838483 - 2838499 + r 71 -10.8 -3.59836 | opp_overlap 2838483, overlap 2838479 2838473 2838472 CCCGAGATGAAAAAA CGGGCC ACGAG GGCCCG TTCATTTCATCATTT TERM 1450 2838499 - 2838483 - R 100 -10.8 -5.21709 | opp_overlap 2838479 2838473 2838472 2838483 CCCGAGATGAAAAAA CGGGCC ACGAG GGCCCG TTCATTTCATCATTT Lcho_2592 2839889 - 2838693 - | extracellular ligand-binding receptor TERM 1451 2838749 - 2838771 + g 74 -7.6 -4.2558 | overlap 2838704 AGGTGTACAGGGTCA GGGCGCCGTT CTT GATGTCGCCC TTTTCGTCGAAGCTG TERM 1452 2839792 - 2839817 + g 71 -6.7 -4.21772 | gap 1, opp_overlap 2839788 GCAGCGACAGACGCG GCAGCCGCAGCC TGA GGC-GCAGCAGC TTCTTCTTTCTTGCC Lcho_2593 2840534 - 2840085 - | hypothetical protein Lcho_2594 2840980 - 2840543 - | DNA polymerase III chi subunit HolC Lcho_2595 2842449 - 2840989 - | leucyl aminopeptidase Lcho_2596 2842477 - 2843571 + | permease YjgP/YjgQ family protein Lcho_2597 2843584 - 2844690 + | permease YjgP/YjgQ family protein Lcho_2598 2844702 - 2845097 + | cobalamin (vitamin B12) biosynthesis CbiX protein Lcho_2599 2845094 - 2846059 + | LysR family transcriptional regulator TERM 1453 2846046 - 2846034 - f 71 -10.5 -3.65199 | overlap 2846021 AAGGCTCGACCGAAA GCGGC AAC GCCGC CGACGCCATGTGAAC Lcho_2600 2846104 - 2847294 + | aminotransferase class I and II Lcho_2601 2848170 - 2847325 - | hypothetical protein TERM 1454 2848204 - 2848192 - H 70 -4.7 -4.41348 | opp_overlap 2848192 GCCGTTTCAAATAAA GTGGG CTT CCCTC GTTCTTATCGACCGG Lcho_2602 2848228 - 2848923 + | glutathione S-transferase domain-containing protein TERM 1455 2848930 - 2848978 + T 87 -17.9 -2.90723 | CACCGCTGATCAGGC GGCCGAGCCGGTGGCGTCGGCCG CAT CGGCCGCATCGGCCGGCTCGGCA TCTGCTTCGGCATCG Lcho_2603 2850177 - 2848924 - | transglutaminase domain-containing protein Lcho_2604 2852981 - 2850174 - | hypothetical protein TERM 1456 2852666 - 2852643 - G 95 -12.4 -4.59853 | opp_overlap 2852665 CGAACTCTGGAAAAA CCGCTGCCAC AGCG GTGCCAGCGG CGGGTGCGCCTTGTG TERM 1457 2852718 - 2852771 + g 78 -12.3 -3.89572 | gap 1, overlap 2852721 GGCGGCCGTGTCGGT GTCGCCGTCGATGTCGATGTCGGCAG CCG CT-TCGGCCGCGTCAGCGACGGCGGC TTCTTCTGATTCGGT TERM 1458 2853041 - 2853007 - R 100 -12.8 -4.58395 | overlap 2853009 CTCAGTGGCCAAAAA CACCCTGCCGGTGC AGCTCAG GCACCGGCATGGGG ATGGGAAGACGCGGT TERM 1459 2853039 - 2853009 - R 88 -14 -3.90762 | overlap 2853007 CAGTGGCCAAAAACA CCCTGCCGGTGC AGCTCAG GCACCGGCATGG GGATGGGAAGACGCG Lcho_2605 2856584 - 2853060 - | transglutaminase domain-containing protein TERM 1460 2853821 - 2853771 - G 75 -15.5 -3.28712 | GGGTTCCTTCCAGAA GCGCGCCACCAGC-GCGCGCAGCAG CAG CTGCTGCACGATGCTCAT-GCGCGC ATGCGGCGGCATCTC TERM 1461 2856654 - 2856613 - R 71 -10.7 -3.6682 | opp_overlap 2856613 2856614 2856614, overlap 2856620 TTTTAGTGAGTGAAA TCATGAATGGCACCCGGCC TGTC GGCCGGGTGCCACCGTCGT GGTTCTTGAAAGAGC TERM 1462 2856613 - 2856656 + r 74 -11.1 -3.61398 | gap 2, opp_overlap 2856613 2856620, overlap 2856614 2856614 TTTTAGTGAGTGAAA TCATGA--ATGGCACCCGGCC TGTC GGCCGGGTGCCACCGTCGTGG TTCTTGAAAGAGCGA TERM 1463 2856647 - 2856620 - R 100 -22.8 -3.33483 | opp_overlap 2856614 2856614 2856613, overlap 2856613 GAGTGAAATCATGAA TGGCACCCGGCC TGTC GGCCGGGTGCCA CCGTCGTGGTTCTTG Lcho_2606 2857650 - 2856691 - | hypothetical protein Lcho_2607 2859088 - 2857655 - | hypothetical protein Lcho_2608 2861586 - 2859085 - | DNA internalization-related competence protein ComEC/Rec2 TERM 1464 2859440 - 2859402 - G 77 -4.6 -4.71426 | gap 2 GCGGCACCAACAAAA CATCGGCTTGCAGGCTCA GTCCG TGAGCCAGC--GCCAACG CTTCTTCGGTCAGGC TERM 1465 2860061 - 2860024 - G 70 -13.3 -3.36749 | overlap 2860025 CATCGGCAACAGGAA CGCCCCGCCCAGCAGCC GGAC GGCCACCGGCCAGGGCA GGATCAGCAAGGCGG TERM 1466 2860491 - 2860468 - G 71 -6.6 -4.1822 | overlap 2860471 2860480 GGCGACCGCAACAAA CGACAGCCAG AAGC CCGGCTGCAG CAAGGCCCATGGATC Lcho_2609 2861774 - 2862232 + | endoribonuclease L-PSP Lcho_2610 2862303 - 2862800 + | disulphide bond formation protein DsbB Lcho_2611 2863039 - 2863794 + | lytic transglycosylase catalytic Lcho_2612 2863849 - 2864310 + | general secretion pathway protein G Lcho_2613 2864359 - 2865507 + | type II secretion system protein Lcho_2614 2865511 - 2867253 + | type II secretion system protein E TERM 1467 2867293 - 2867255 - g 87 -19.7 -3.1855 | gap 1, opp_overlap 2867255 CGGTTCAAGAGTGAA CTGCGCCTGG-AGCTGCG CATG CGCAGCTGCCAGGCGGAG TTGCTGCCGCCCGGC TERM 1468 2867255 - 2867293 + G 87 -19.7 -3.14132 | gap 1, opp_overlap 2867255 CGGTTCAAGAGTGAA CTGCGCCTGG-AGCTGCG CATG CGCAGCTGCCAGGCGGAG TTGCTGCCGCCCGGC Lcho_2615 2867231 - 2868001 + | hypothetical protein Lcho_2616 2867998 - 2868603 + | fimbrial assembly Lcho_2617 2868600 - 2869181 + | putative transmembrane protein TERM 1469 2869616 - 2869573 - g 71 -15.3 -3.05384 | gap 2 CCGGCGCCGATCGAA GTGGTCGCGGCGCCGGTTGCG CCGC CGCCACCGCCGCCGC--CCAC GCTGCCCTACCGGTT Lcho_2618 2869237 - 2869830 + | hypothetical protein Lcho_2619 2869827 - 2871815 + | type II and III secretion system protein Lcho_2620 2871835 - 2872314 + | putative general secretion pathway GspG related transmembrane protein Lcho_2621 2872308 - 2872862 + | type II secretion system protein G Lcho_2623 2874909 - 2873350 - | histidine kinase Lcho_2622 2872895 - 2873461 + | hypothetical protein TERM 1470 2873526 - 2873510 - GT 71 -10.1 -3.57263 | overlap 2873511 ATTCGCACCCGCAAA CCGCCGA GCG TCGGCGA ACGGTCGACCTGCAC TERM 1471 2874525 - 2874508 - GT 72 -8.3 -4.07885 | GACGGTGTCCGAAAA GCCGGGC TTGA GCTCGGC CAGCGGCTCGTTGGG Lcho_2624 2875632 - 2874913 - | two component transcriptional regulator TERM 1472 2875797 - 2875776 - R 100 -11.6 -5.76949 | GATCCGGAAAAAAAA CACCCGAC GCGAGG GTCGGGTG TCCGGATCGGATCGA Lcho_2625 2880562 - 2875853 - | putative multicopper oxidase TERM 1473 2879908 - 2879936 + g 83 -17.4 -3.40403 | opp_overlap 2879907 GCACGGTCGAACCAC CGTCGCCCTCGC CACCC GCGGGGGCGGCG TTGTCATGGAACAGG TERM 1474 2880647 - 2880626 - H 71 -4.3 -4.53303 | overlap 2880628 2880639 CACCCCGACATAAAA CGTCGCTGG TAAA CCAGCCATG CCACTGGACCGAGAC TERM 1475 2882494 - 2882482 - g 70 -4.7 -4.42806 | overlap 2882483 2882484 GCAGCCTGAAAGAAA CCGCC CCC GGCGT CTACACCGGCAGCAT Lcho_2626 2880999 - 2882978 + | YVTN beta-propeller repeat-containing protein TERM 1476 2883086 - 2883113 + G 70 -9.8 -3.78775 | gap 1 AGATCAGGCACTCGG GCCTGCTGCGGCG CTG CGCGGCA-CGGGC TTTCGTGATCGGCGC TERM 1477 2884198 - 2884176 - g 72 -3.3 -4.48987 | gap 1, overlap 2884177 2884178 CCTGTACAACGAAAA GCCCGAGCAG CACA CCGC-CGTGC TCTGGGTCGGCAACG Lcho_2627 2883016 - 2884293 + | electron transport protein SCO1/SenC TERM 1478 2884425 - 2884409 - g 70 -13.7 -3.1552 | opp_overlap 2884407 2884413 2884414, overlap 2884407 GCCCACCGATGAAGA CGCTGCG CTG CGCAGCG GGCGAGCGATCTTTC TERM 1479 2884557 - 2884514 - g 70 -13.9 -3.16564 | gap 2 CCTGCAGGGCACCAA GGTGGCCTGTGCC--CGCTGC CACG GCAGCGACGGCACCGGCAACC GCGAAGGCGGCCTGA Lcho_2628 2884293 - 2885948 + | cytochrome c, putative Lcho_2629 2886577 - 2887989 + | hypothetical protein TERM 1480 2888571 - 2888538 - g 71 -14.5 -3.02263 | gap 1, opp_overlap 2888555, overlap 2888526 ACATGCTGTCGAACA CGCCCGCCACCGGCCG TGT CGGCCCGTGGCTG-CG CTGGACCGGCAACGA Lcho_2630 2888006 - 2890483 + | fibronectin type III domain-containing protein TERM 1481 2890532 - 2890547 + F 100 -11.8 -5.29846 | opp_overlap 2890532 GGGCCCTCGATCGAA CGCGCC CTCG GGCGCG TTTTTCTTTGGCATT Lcho_2631 2890678 - 2891007 + | hypothetical protein Lcho_2632 2893334 - 2891010 - | DNA topoisomerase IV, A subunit Lcho_2633 2893935 - 2893408 - | hypothetical protein Lcho_2634 2894809 - 2893994 - | OmpA/MotB domain-containing protein TERM 1482 2894255 - 2894288 + g 75 -16.1 -3.04144 | gap 1, overlap 2894248 GCAGCGTTGCGCCAG GGCGGCGAT-CTGGTG CAC CACCGGCATCGCTGCC TGTTCAAGCTGGGCC TERM 1483 2894548 - 2894515 - G 83 -5.8 -4.84359 | overlap 2894545 CCAGGTGCAGAAAAA CGCCCGGCACGCCC ATCAGA GGTCGCAACAGGCG GTTCGCCTCACCCGT Lcho_2635 2897162 - 2895186 - | DNA topoisomerase (ATP-hydrolyzing) Lcho_2636 2897352 - 2898074 + | hypothetical protein Lcho_2637 2898158 - 2899402 + | major facilitator transporter Lcho_2638 2899412 - 2899543 + | hypothetical protein Lcho_2639 2899559 - 2900146 + | methyltransferase type 11 Lcho_2640 2900205 - 2901086 + | dihydrodipicolinate synthase TERM 1484 2901715 - 2901697 - g 70 -12.4 -3.29144 | CGACTGGCTCGAGAA CCGCGGCA AGC TGCCGCAG AACACCTTGAGCCGG Lcho_2641 2901209 - 2902405 + | NlpB/DapX family lipoprotein TERM 1485 2902434 - 2902460 + T 100 -19.4 -5.32882 | TCGACCGGCCCTGCA GCCGACCCGCGC TCC GCGCCGGTCGGC TTTTTTCTGCTCGTC TERM 1486 2902509 - 2902494 - T 100 -11.8 -5.83822 | opp_overlap 2902494 GACAGCCAAAAAAAA GCCGCC CGGA GGCGGC TTTTCGAATCGAAGC TERM 1487 2902494 - 2902509 + T 85 -11.8 -4.13767 | opp_overlap 2902494 GACAGCCAAAAAAAA GCCGCC CGGA GGCGGC TTTTCGAATCGAAGC Lcho_2642 2904199 - 2902943 - | cupin 4 family protein Lcho_2643 2904258 - 2904791 + | putative FkbP-type peptidyl-prolyl cis-trans isomerase Lcho_2644 2905283 - 2904831 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut Lcho_2645 2906557 - 2905298 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 1488 2905497 - 2905507 + g 72 -3.2 -4.57073 | ATCAGCGGCACCTTC TTGC GCA GCAG TTTTTCGCGCGCGTG Lcho_2646 2906719 - 2909091 + | TonB-dependent receptor plug Lcho_2647 2910312 - 2909098 - | Rh family protein/ammonium transporter TERM 1489 2910930 - 2910914 - g 73 -13.7 -3.28712 | GCCGCTGCTGCACAA GCTCGCC GCG GGCGAGC CGGTCAAGAACCGCA Lcho_2648 2910729 - 2912168 + | DEAD/DEAH box helicase domain-containing protein Lcho_2649 2912715 - 2912212 - | GCN5-related N-acetyltransferase Lcho_2650 2913585 - 2913112 - | 60S ribosomal protein L19 TERM 1490 2913307 - 2913325 + g 73 -9.5 -3.95324 | overlap 2913289 TGCAGCCTTCTTGGT GGCGGCC TTGCT GGCCGTC TTCTTCTTGACCGTC TERM 1491 2913603 - 2913640 + r 77 -12.8 -3.32844 | gap 1 GAACTCTCCTCGTTG TGATGGACATGGCCGGG CAGAA CCCGGCCGA-TCCATCA TTATCGGATCGCCCC Lcho_2651 2914544 - 2913681 - | procollagen-proline dioxygenase Lcho_2652 2915383 - 2914610 - | hypothetical protein Lcho_2653 2915445 - 2915873 + | hypothetical protein Lcho_2654 2916428 - 2915874 - | hypothetical protein TERM 1492 2916012 - 2915994 - G 73 -13.8 -3.35996 | overlap 2915976 2915973 CAGTGCCACGCACAA GGCCAGCC CCA GGCCGGCC GCAGACGCGCTGGCC Lcho_2655 2916592 - 2917230 + | endonuclease III TERM 1493 2917268 - 2917240 - T 79 -2.4 -5.08824 | gap 2, overlap 2917241 2917242 2917244 CCCTGAGCGAAAAAA CTCAGCCCTGCAGC GCT GCC-CAGGCCTG-G ATGCGCGCGGCGATC Lcho_2656 2918050 - 2917241 - | periplasmic binding protein Lcho_2657 2918463 - 2918068 - | aspartate 1-decarboxylase Lcho_2658 2919124 - 2918474 - | phosphoglycerate mutase Lcho_2659 2919911 - 2919117 - | cobalamin 5'-phosphate synthase Lcho_2660 2920990 - 2919911 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Lcho_2661 2922582 - 2921041 - | cobyric acid synthase CobQ TERM 1494 2921597 - 2921625 + g 75 -13.9 -3.53012 | TCGAGCCGCTGTGCG CGCAGCCAGGC GAGGTCG GCCTGGCTGTG TTTCGAGCCCGGCAG Lcho_2662 2923395 - 2922598 - | ABC transporter-related protein Lcho_2663 2924399 - 2923392 - | transport system permease protein TERM 1495 2923598 - 2923578 - G 73 -14.7 -3.14132 | overlap 2923591 CGTCGCGTGCACGAA GCGCCGCAC CAG ATGCGGCGC GACCAGCCCGACAAA TERM 1496 2923872 - 2923848 - G 73 -9.9 -3.96148 | opp_overlap 2923827, overlap 2923827 GCTGCCGAGCAGAAA CGCCTGCTTGC CGC GCAAGGCGGCG GGCGACACCATCGTC Lcho_2664 2925307 - 2924396 - | periplasmic binding protein Lcho_2665 2925879 - 2925304 - | cobalbumin biosynthesis protein TERM 1497 2925794 - 2925830 + g 95 -15.3 -4.36914 | gap 2 GGCAGCGCCAGCCAG GTGGCA-G-CGCGCTGC TCGGC GCAGCGCGACTTGCCAC TTTTCTGGCCGCCGA Lcho_2666 2927807 - 2925891 - | TonB-dependent receptor Lcho_2667 2928208 - 2928435 + | hypothetical protein Lcho_2668 2928432 - 2928758 + | hypothetical protein Lcho_2669 2929036 - 2929509 + | hypothetical protein Lcho_2670 2929506 - 2930318 + | hypothetical protein Lcho_2671 2931311 - 2930325 - | diguanylate cyclase Lcho_2672 2931963 - 2931385 - | hypothetical protein Lcho_2673 2933349 - 2931985 - | putative ferredoxin Lcho_2674 2933871 - 2933452 - | rubrerythrin Lcho_2675 2935201 - 2934050 - | response regulator receiver/ANTAR domain-containing protein TERM 1498 2936944 - 2936889 - g 82 -13 -4.07885 | CACCTGGGCCGAAAA GGGTGGCCGTGCCCGCACCACGCACG ACGC CGCGGTCGCCACCGGCTCGGCCACCC GCTTGGCCCGCTGAA Lcho_2676 2935702 - 2936958 + | major facilitator transporter Lcho_2677 2938766 - 2937024 - | protein serine/threonine phosphatase TERM 1499 2938427 - 2938485 + g 86 -18.1 -3.40403 | gap 2 GGCCTTGCAGGACCA CCGACGTC--AGCGTGGTGAGCGCCGTGT GGC GCTCGGCGCGCGCCGCGCTGCGACGCCGG TTGTGGTCGACCAGC TERM 1500 2938647 - 2938664 + g 70 -9.8 -3.75024 | CACGCCGTCGGCCAC CGCGGC GATCAG GCCGCG TTCTTCCTCGTGCGC TERM 1501 2940196 - 2940175 - g 76 -11.5 -3.79906 | CCAGGGCCACAACAA GGCCTCGGC GATG GCCGATGCC GACGAGGTCTGCGGC Lcho_2678 2938910 - 2941375 + | nitrite reductase (NAD(P)H), large subunit Lcho_2679 2941408 - 2941764 + | nitrite reductase (NAD(P)H), small subunit Lcho_2680 2941827 - 2944628 + | molybdopterin oxidoreductase Lcho_2681 2946119 - 2944785 - | two component, sigma54 specific, Fis family transcriptional regulator Lcho_2682 2948023 - 2946116 - | histidine kinase TERM 1502 2947531 - 2947512 - G 70 -4.9 -4.35483 | overlap 2947514 GGGTAGGAGAAGAAA TAGCCCG GCTCCT CGGGCGA GGCGCCGATCGCGAA Lcho_2683 2948148 - 2948020 - | hypothetical protein Lcho_2684 2953047 - 2948203 - | NAD-glutamate dehydrogenase TERM 1503 2953593 - 2953554 - R 75 -7 -4.35885 | gap 1, overlap 2953558 2953559 AGCCAGCAGAAGAAA GTAACCCGCCCGCCGGGGC GGA ACCCCGGCGCGCTC-TCAC GCAATGAAAGCCCCG TERM 1504 2953575 - 2953558 - R 74 -10.5 -3.73387 | overlap 2953554 2953559 AGCAGAAGAAAGTAA CCCGCCC GCCG GGGCGGA ACCCCGGCGCGCTCT Lcho_2685 2954365 - 2953631 - | ABC transporter-related protein Lcho_2686 2955043 - 2954378 - | polar amino acid ABC transporter, inner membrane subunit Lcho_2687 2955783 - 2955040 - | polar amino acid ABC transporter, inner membrane subunit Lcho_2688 2956773 - 2955871 - | extracellular solute-binding protein Lcho_2689 2957875 - 2956805 - | L-asparaginase, type II Lcho_2690 2958275 - 2959204 + | glycosyl transferase family protein TERM 1505 2959280 - 2959256 - T 100 -17.9 -5.4505 | CCGGGCAAGAAAAAA GCCCTGACGGC GAC ACCGTCAGGGC TCATGCACGAGCGAT Lcho_2691 2961202 - 2959304 - | propionate--CoA ligase Lcho_2692 2961758 - 2961297 - | glyoxalase/bleomycin resistance protein/dioxygenase Lcho_2693 2963854 - 2961779 - | carbamoyl-phosphate synthase L chain ATP-binding Lcho_2694 2965407 - 2963875 - | carboxyl transferase TERM 1506 2965351 - 2965375 + g 76 -3.5 -4.63932 | gap 1, overlap 2965361 GATGCGCTTTTGTCC GC-CGCCCAG TCGGGC CTTGGCGCGC TTTTCTTCGAGCATC Lcho_2695 2966523 - 2965468 - | LAO/AO transport system ATPase Lcho_2696 2966989 - 2966516 - | GCN5-related N-acetyltransferase Lcho_2697 2969198 - 2967036 - | methylmalonyl-CoA mutase, large subunit TERM 1507 2967165 - 2967209 + g 75 -13.7 -3.53091 | gap 1 GTAGTCCTGCGCCGG GATCACGCCGCCGACGAACA CGATGA TG-TCGTCGGCGCCCTGATC TTTCAGCGCCGCGAT Lcho_2698 2969235 - 2969933 + | GntR family transcriptional regulator Lcho_2699 2970048 - 2971208 + | succinyl-CoA synthetase, beta subunit TERM 1508 2971273 - 2971247 - g 74 -7.3 -4.2461 | gap 1, overlap 2971251 ATTCTCATCAACAAA GACACCC-GCGT CATC ACGCAGGGCATC ACCGGCAAGACCGGC Lcho_2700 2971226 - 2972119 + | succinyl-CoA synthetase, alpha subunit TERM 1509 2972158 - 2972121 - T 78 -13.3 -3.53091 | AGGCGCTGCTGTAAA CGGCACGGATCGACCGG TAAG CCGGTCGTGCCATGACG AGCCGCCTTCGGGCG TERM 1510 2972160 - 2972175 + T 100 -11.8 -4.7373 | GTCGTGCCATGACGA GCCGCC TTCG GGCGGC TTTTTCGTGGGCTGA TERM 1511 2972249 - 2972220 - T 87 -15.1 -3.64703 | opp_overlap 2972221 2972227, overlap 2972221 2972223 2972227 TCGGCTCGACGGAAA CGACAAAGGCTCC CGAA GGAGCCTTTGTCT TCATCGCGCCGCGAG TERM 1512 2972248 - 2972221 - T 89 -18.6 -2.78679 | opp_overlap 2972221 2972227, overlap 2972220 2972223 2972227 CGGCTCGACGGAAAC GACAAAGGCTCC CGAA GGAGCCTTTGTC TTCATCGCGCCGCGA TERM 1513 2972221 - 2972248 + T 89 -18.6 -3.14132 | opp_overlap 2972221 2972220 2972223 2972227, overlap 2972227 CGGCTCGACGGAAAC GACAAAGGCTCC CGAA GGAGCCTTTGTC TTCATCGCGCCGCGA TERM 1514 2972246 - 2972223 - T 81 -15.4 -2.94144 | opp_overlap 2972221 2972227, overlap 2972221 2972220 2972227 GCTCGACGGAAACGA CAAAGGCTCC CGAA GGAGCCTTTG TCTTCATCGCGCCGC TERM 1515 2972242 - 2972227 - T 79 -10.4 -4.14725 | opp_overlap 2972221 2972227, overlap 2972223 2972221 2972220 GACGGAAACGACAAA GGCTCC CGAA GGAGCC TTTGTCTTCATCGCG TERM 1516 2972227 - 2972242 + T 86 -10.4 -4.23674 | opp_overlap 2972227 2972223 2972221 2972220, overlap 2972221 GACGGAAACGACAAA GGCTCC CGAA GGAGCC TTTGTCTTCATCGCG Lcho_2701 2973601 - 2972288 - | citrate synthase I Lcho_2702 2973944 - 2973669 - | hypothetical protein Lcho_2703 2974680 - 2973976 - | succinate dehydrogenase and fumarate reductase iron-sulfur protein Lcho_2704 2976507 - 2974699 - | succinate dehydrogenase, flavoprotein subunit Lcho_2705 2976869 - 2976507 - | succinate dehydrogenase, hydrophobic membrane anchor protein Lcho_2706 2977335 - 2976907 - | succinate dehydrogenase, cytochrome b556 subunit Lcho_2707 2978208 - 2977429 - | GntR family transcriptional regulator Lcho_2708 2978431 - 2979417 + | malate dehydrogenase TERM 1517 2979460 - 2979478 + F 100 -11.7 -5.75599 | opp_overlap 2979460 2979455 GGTCACAAAATCGAA GCCGGTC CGCGT GACCGGC TTTTTTTATGCTTTG TERM 1518 2979478 - 2979460 - f 70 -11.7 -3.41587 | opp_overlap 2979460, overlap 2979455 GGTCACAAAATCGAA GCCGGTC CGCGT GACCGGC TTTTTTTATGCTTTG Lcho_2709 2979544 - 2980596 + | putative lyase Lcho_2710 2980807 - 2981247 + | putative signal peptide protein TERM 1519 2981277 - 2981304 + F 100 -17.8 -5.00884 | gap 1, overlap 2981279 CACGAGCCCTCGCGT CA-CAGGCCGCCC ATC GGGCGGCCTGCTG TTTTTTGGCACGCAT TERM 1520 2981279 - 2981301 + F 100 -20.6 -3.07655 | overlap 2981277 CGAGCCCTCGCGTCA CAGGCCGCCC ATC GGGCGGCCTG CTGTTTTTTGGCACG TERM 1521 2981387 - 2981371 - f 75 -3 -4.72127 | gap 1, overlap 2981362 2981373 ATATAAGACATAAAA TATCGGG CAAA CCCGA-A GACACCGTCCCGCAC TERM 1522 2981386 - 2981373 - f 70 -8.1 -3.95858 | overlap 2981362 2981371 ATAAGACATAAAATA TCGGG CAAA CCCGA AGACACCGTCCCGCA Lcho_2711 2981459 - 2984050 + | aconitate hydratase 2 TERM 1523 2984118 - 2984093 - T 93 -17.5 -3.54475 | opp_overlap 2984093 CGTTCCATGAGACAA GGCCCGCCGGG GTAA CTCGGCGGGCC TTTTTCATGCCTGGA TERM 1524 2984093 - 2984118 + T 100 -19.7 -4.7497 | opp_overlap 2984093 CGTTCCATGAGACAA GGCCCGCCGGG GTAA CTCGGCGGGCC TTTTTCATGCCTGGA Lcho_2712 2985056 - 2984145 - | ATP dependent DNA ligase Lcho_2713 2986673 - 2985219 - | exodeoxyribonuclease I TERM 1525 2986716 - 2986693 - R 77 -16 -2.53876 | CGGCACGTTAACCGA TGCCGCGCCC GCCA AGGCGCGGCA AGCACCCGTCGTCAA Lcho_2714 2987954 - 2986728 - | hypothetical protein Lcho_2715 2989377 - 2987983 - | undecaprenyl-phosphate glucose phosphotransferase TERM 1526 2989468 - 2989439 - R 78 -12.7 -3.48276 | opp_overlap 2989436 2989434 2989433 GTCCGGTGGACACAA CGCCGATCCACGC ACCG GCGCGGCGCGGCG TGATGCTTTGCGCGC Lcho_2716 2991444 - 2989534 - | diguanylate cyclase TERM 1527 2989840 - 2989894 + g 73 -14.3 -3.39327 | gap 1, opp_overlap 2989840, overlap 2989825 CCGGCGGGCCAGGAA CTTCA-GCGCCTCGTCGCCGGTCTGG TGAC CCAGGCTGTCGTTCAGGCGCTTGAAG TTGTCGATGTCGAGC Lcho_2717 2993722 - 2991560 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase Lcho_2718 2997499 - 2993732 - | multi-sensor hybrid histidine kinase TERM 1528 2997075 - 2997018 - G 72 -15.6 -2.74144 | gap 3, overlap 2997017 TCGGGATCGTGAAAC TCGAGCGCCGCCAGCGTCGGCCGC-AGCG GCT CGCTCGCGGCCAGC-CCGGCGACGG-CGA CCGGGCCGGGCCCGT TERM 1529 2997572 - 2997594 + H 70 -6.2 -4.24002 | opp_overlap 2997566, overlap 2997567 TGAAGGAATCGCCGA CGCAGCCC CGCGCGT GGCCTGCG TTTTCACATTTGCGC Lcho_2719 2997834 - 2999183 + | histidine kinase Lcho_2720 3000355 - 2999225 - | hypothetical protein Lcho_2721 3000972 - 3000367 - | response regulator receiver protein Lcho_2722 3003997 - 3001061 - | putative signal transduction histidine kinase Lcho_2723 3005211 - 3004012 - | putative signal transduction protein Lcho_2724 3006450 - 3005233 - | flagellar hook-associated protein 3 Lcho_2725 3008470 - 3006548 - | flagellar hook-associated protein FlgK Lcho_2726 3009513 - 3008467 - | flagellar rod assembly protein/muramidase FlgJ TERM 1530 3008863 - 3008876 + g 70 -9.5 -3.83205 | GCCGCGGATCTCGCG CCGGC CCCA GCCGG TTTCGTGTGCGGCCT Lcho_2727 3010694 - 3009516 - | flagellar P-ring protein TERM 1531 3009855 - 3009888 + g 74 -7.4 -4.2349 | gap 1 GGCGTTGACGATGAC CTTGGCGGCCG-GCT TGGCC AGCTCGATCGCCAGG TTTTCCATGTCGGCC Lcho_2728 3011442 - 3010741 - | flagellar L-ring protein TERM 1532 3010908 - 3010939 + g 74 -9.4 -4.07885 | opp_overlap 3010904, overlap 3010904 GGCCCGAGAAGCGCA GCACGTCGGCGTTG TCGT TGACGCCGATCTGC TTTTCACCCGCGATC Lcho_2729 3012234 - 3011452 - | flagellar basal-body rod protein FlgG Lcho_2730 3012977 - 3012252 - | flagellar basal-body rod protein FlgF Lcho_2731 3014497 - 3012992 - | hypothetical protein Lcho_2732 3015231 - 3014557 - | flagellar hook capping protein Lcho_2733 3015708 - 3015298 - | flagellar basal-body rod protein FlgC Lcho_2734 3016147 - 3015743 - | flagellar basal-body rod protein FlgB Lcho_2735 3016319 - 3017086 + | flagella basal body P-ring formation protein FlgA Lcho_2736 3017406 - 3017726 + | anti-sigma-28 factor, FlgM Lcho_2737 3017723 - 3018130 + | hypothetical protein Lcho_2738 3018511 - 3018137 - | hypothetical protein Lcho_2739 3018993 - 3018574 - | hypothetical protein Lcho_2740 3019698 - 3019129 - | deoxycytidine triphosphate deaminase TERM 1533 3020172 - 3020212 + G 75 -5.2 -4.56597 | overlap 3020173 GGCTGGGCGCACTGG TGCAGGTCATCGGCCATT ACTAC GAGGGCCGCAGACCGGCG TTTTTCGACGACCGC TERM 1534 3020227 - 3020251 + G 70 -13.6 -3.14132 | GTTTTTCGACGACCG CATCGGCCTG CTGGT CGGGCCGATG TTCGTCACCGCCGAG Lcho_2741 3019823 - 3020362 + | hypothetical protein Lcho_2742 3020773 - 3020402 - | histone family protein nucleoid-structuring protein H-NS TERM 1535 3020974 - 3020941 - g 70 -13.2 -3.34013 | gap 1 CACGGCGGCAATGAA GTGGTCCGGATCGGC GAGCG GCCGATCCCG-CCAC GCCGCACCGGCGAGG Lcho_2743 3020893 - 3021936 + | alcohol dehydrogenase Lcho_2744 3023260 - 3021920 - | PAS/PAC sensor signal transduction histidine kinase TERM 1536 3022605 - 3022617 + g 78 -9.1 -4.371 | opp_overlap 3022568, overlap 3022565 TCGTGCGCGGCGGTG GCGAG AAA CTCGC TTTTCATCTGGTCGA TERM 1537 3023312 - 3023299 - R 85 -5.2 -5.03314 | overlap 3023300 GGCACGCCGAAAAAA CCGC GCTCAG GCGG GCTGCTGCTGCAAGG Lcho_2745 3024774 - 3023305 - | methyl-accepting chemotaxis sensory transducer TERM 1538 3024378 - 3024341 - G 90 -16.2 -3.78775 | opp_overlap 3024331 TGGGCCAGCAGGAAA CCCAGCGGCAGGCCGG CCGAAT CCGGCATGACGCCGGG CAGCCAGCCGTTCAT TERM 1539 3024957 - 3024938 - g 74 -2.8 -4.7373 | CCACGCCATGAAAAA GATCCTCA TCGT CGAAGACC AGCAGGACATCCGCG Lcho_2746 3024930 - 3025292 + | response regulator receiver protein Lcho_2747 3026180 - 3025302 - | formate dehydrogenase family accessory protein FdhD TERM 1540 3027096 - 3027055 - g 70 -13.5 -3.21747 | GGATCCGATGATCAA GCTGGTGCTGCCGCCGGGT TACG ACCCGAAGGCCGCCCCGGC CGCCCGCTGACGACG Lcho_2748 3026315 - 3027106 + | hypothetical protein Lcho_2749 3027409 - 3027113 - | hypothetical protein Lcho_2750 3030315 - 3027406 - | formate dehydrogenase, alpha subunit TERM 1541 3027783 - 3027811 + g 75 -14.5 -3.4252 | overlap 3027784 CGTACCAGCGGCTGT TGTCGGTGCGCCG CGT CTGCGCGCCGACG TTGTACTGGCTCAGC TERM 1542 3027784 - 3027810 + g 71 -15.8 -2.65298 | overlap 3027783 GTACCAGCGGCTGTT GTCGGTGCGCCG CGT CTGCGCGCCGAC GTTGTACTGGCTCAG TERM 1543 3028248 - 3028237 - G 70 -2.2 -4.56597 | opp_overlap 3028222, overlap 3028222 3028219 CGCGCCCGGCAAAAA CACG TGCG CGTA CTTGGCGGTCTCGTT TERM 1544 3028509 - 3028546 + g 82 -13.5 -3.78934 | gap 1 GGTAGCCCGGCAGCT CGTGC-GGGAAGCTGC CCATGTC GCAGCTGCCCTGCACG TTGTTCTGGCCACGC Lcho_2751 3031897 - 3030326 - | NADH dehydrogenase (quinone) Lcho_2752 3032415 - 3031894 - | NADH dehydrogenase (ubiquinone) 24 kDa subunit Lcho_2753 3033514 - 3032552 - | LysR family transcriptional regulator TERM 1545 3034142 - 3034184 + G 74 -2 -4.72986 | gap 2, overlap 3034170 3034171 AACCGGGCGCAGTGG CACC-GCATC-CGGATCGTC GAGCG GACGATCTGAGGCTCAGGTG TTTTTGCTGACCGTG Lcho_2754 3033662 - 3034174 + | hypothetical protein Lcho_2755 3035272 - 3034178 - | hypothetical protein Lcho_2756 3035693 - 3035358 - | ferredoxin Lcho_2757 3036745 - 3035690 - | hypothetical protein TERM 1546 3038364 - 3038309 - g 75 -12.6 -3.62046 | gap 1, overlap 3038314 GGAGCTGGCCAAGAA GGAAGGCGCCGACGCCG-TGCTGCA CGACGTC TGCAGCGTCTGCATCGAGGCCTTCC GGCTGCTGACGATCT Lcho_2758 3036864 - 3038933 + | methionyl-tRNA synthetase Lcho_2759 3038948 - 3039733 + | hypothetical protein TERM 1547 3040461 - 3040474 + G 74 -9.5 -4.09685 | ATGTCGACCCGCACA GCGCG CGCG CGCGC TTTTCGCGCATCGCC TERM 1548 3041470 - 3041517 + G 71 -8.6 -4.11394 | gap 5, overlap 3041470 GGGCATCGCGCTGCG CCTG-GCGGCCGC-GCATGCG-CAG CCG CTGTCGC-TGCTGCGGC-GCTCGGG TTTTGCCGATCAGCT Lcho_2760 3039794 - 3041617 + | sulphate transporter Lcho_2761 3041660 - 3041860 + | hypothetical protein Lcho_2762 3041857 - 3042768 + | chromosome segregation and condensation protein ScpA Lcho_2763 3043118 - 3045373 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Lcho_2764 3046355 - 3045378 - | guanosine monophosphate reductase TERM 1549 3046526 - 3046503 - R 95 -10.3 -4.79352 | gap 1, opp_overlap 3046503 3046504 3046517 GGAGGCACAAGAAAA CCGGGCGCCA GTATT TGG-GCCCGG TGCCTGATTCTACGC Lcho_2765 3048158 - 3046557 - | diguanylate cyclase Lcho_2766 3049323 - 3048265 - | patatin TERM 1550 3049105 - 3049081 - G 70 -12.7 -3.28924 | opp_overlap 3049081, overlap 3049082 GACCTCGCTCCACAA CGCCGCCAGCG CCT CGCGGGCGGCC TCGTTGGCGGCCGGG TERM 1551 3049104 - 3049082 - G 71 -16.2 -2.57211 | opp_overlap 3049081, overlap 3049081 ACCTCGCTCCACAAC GCCGCCAGCG CCT CGCGGGCGGC CTCGTTGGCGGCCGG TERM 1552 3051225 - 3051241 + G 75 -5.7 -4.56597 | opp_overlap 3051214 3051213, overlap 3051226 AAACCGGCGAGATCC TGTCGCC GCT GGCGGCC TTTTTGACCCACGCC Lcho_2767 3049400 - 3051946 + | UvrD/REP helicase Lcho_2768 3052497 - 3052000 - | Ferritin Dps family protein TERM 1553 3052553 - 3052537 - R 73 -9.3 -3.82191 | GGAACTCTAGAACAA GGTCGGC TCG GCCGGCC GATGCAGGTCAAGAC TERM 1554 3052607 - 3052581 - R 100 -13 -5.07486 | gap 1, opp_overlap 3052590 GACCGGCAACAAAAA GCCCCGCGGCG GCACTG CGC-GCGGGGC CGTATCTCGATCGGG Lcho_2769 3053901 - 3052648 - | isocitrate dehydrogenase, NADP-dependent Lcho_2770 3054689 - 3053970 - | putative transmembrane protein Lcho_2771 3056152 - 3054689 - | oxygen-independent coproporphyrinogen III oxidase Lcho_2772 3056325 - 3057062 + | Crp/FNR family transcriptional regulator Lcho_2773 3057407 - 3057075 - | hypothetical protein Lcho_2774 3057667 - 3057404 - | hypothetical protein Lcho_2775 3059170 - 3057683 - | cytochrome c oxidase accessory protein CcoG TERM 1555 3057907 - 3057927 + g 75 -13.3 -3.66874 | GCAAGCCCTCGACGG CGACGCGGT AGG ACTGCGTCG TTTCGGTGGCGTTCA Lcho_2776 3060125 - 3059193 - | cytochrome c oxidase, cbb3-type, subunit III Lcho_2777 3060324 - 3060118 - | Cbb3-type cytochrome oxidase component Lcho_2778 3060961 - 3060332 - | cytochrome c oxidase, cbb3-type, subunit II Lcho_2779 3062422 - 3060983 - | cytochrome c oxidase, cbb3-type, subunit I TERM 1556 3062428 - 3062440 + r 75 -3.3 -4.7254 | TCAAAGCCATTGATT GCTCC TTG GAAGC TTTTTCGTCCGGGAT Lcho_2780 3062648 - 3062478 - | cytochrome oxidase maturation protein, cbb3-type Lcho_2781 3065069 - 3062652 - | heavy metal translocating P-type ATPase Lcho_2782 3065147 - 3065680 + | hypothetical protein Lcho_2783 3065809 - 3066600 + | hypothetical protein Lcho_2784 3066674 - 3068380 + | sulfite reductase (ferredoxin) Lcho_2785 3068404 - 3068940 + | hypothetical protein Lcho_2786 3068937 - 3069671 + | adenylylsulfate reductase, thioredoxin dependent Lcho_2787 3069714 - 3070685 + | Sulfate adenylyltransferase TERM 1557 3070962 - 3070946 - g 75 -15.1 -3.29144 | CGACGCGCTGGAGAA GCGCGCC GCC GGCGCGC CGATCGACCTGTCGC Lcho_2788 3070770 - 3072092 + | sulfate adenylyltransferase, large subunit Lcho_2789 3072098 - 3072820 + | uroporphyrin-III C-methyltransferase Lcho_2790 3072945 - 3073268 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1558 3073361 - 3073394 + G 91 -20.3 -3.28791 | opp_overlap 3073346, overlap 3073362 CACGTCAGACCCCGT CTGCCACCGCCGCCA TTTC TGGCGGCGGTGGCGC TTCTGCCGGGGCGAT TERM 1559 3073362 - 3073393 + G 93 -23.8 -2.57132 | opp_overlap 3073346, overlap 3073361 ACGTCAGACCCCGTC TGCCACCGCCGCCA TTTC TGGCGGCGGTGGCG CTTCTGCCGGGGCGA Lcho_2791 3073336 - 3074442 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1560 3075135 - 3075079 - g 85 -20.3 -2.54896 | gap 2, overlap 3075075 GCCCGAGCCAATCCA GCCCGGC-GTGGGC-CTGGTGGCCATG ACGCG CACGGCCACCAGTGCCGACGGCCAGAC GCTCTACATGGTCGC Lcho_2792 3074516 - 3076750 + | PAS/PAC sensor signal transduction histidine kinase TERM 1561 3076962 - 3076937 - f 89 -13.3 -4.14598 | opp_overlap 3076937, overlap 3076921 TCGAAGGAAATCAAA GGCTTGGAAGC AATC GCTTCCGAGCC TTTTTTCTTTGTGAT TERM 1562 3076937 - 3076962 + F 100 -15.5 -5.73978 | opp_overlap 3076921 3076937 TCGAAGGAAATCAAA GGCTTGGAAGC AATC GCTTCCGAGCC TTTTTTCTTTGTGAT Lcho_2793 3077154 - 3077783 + | dual specificity protein phosphatase TERM 1563 3077865 - 3077826 - f 80 -15 -3.1489 | gap 1, opp_overlap 3077826, overlap 3077818 3077816 3077829 CCAAAGACGATCGAA CCACTGCG-CTGCAGGGCC GAA AGCCCTGCCGGCGCAGTCG GTCATTGCAATCGCC TERM 1564 3077826 - 3077866 + F 81 -16.3 -2.73483 | gap 2, opp_overlap 3077818 3077816 3077826 3077829 CCAAAGACGATCGAA CC-ACTGCGCT-GCAGGGC CGAAA GCCCTGCCGGCGCAGTCGG TCATTGCAATCGCCT TERM 1565 3077862 - 3077829 - f 75 -15.3 -2.77007 | gap 1, opp_overlap 3077826, overlap 3077826 3077818 3077816 AAGACGATCGAACCA CTGCG-CTGCAGGGCC GAA AGCCCTGCCGGCGCAG TCGGTCATTGCAATC Lcho_2794 3078022 - 3080241 + | hypothetical protein Lcho_2795 3080262 - 3081041 + | short-chain dehydrogenase/reductase SDR Lcho_2796 3081053 - 3081325 + | hypothetical protein Lcho_2797 3081369 - 3082778 + | phosphate butyryltransferase TERM 1566 3083705 - 3083761 + G 70 -12.9 -3.31461 | gap 1, opp_overlap 3083702 GCCAGCACCGAAGCC GGCGCCGCGCGGGCG-ATCGCGCTGT TCACCT ACCGCGTGGTGCGCGAGTGCGGTGCC TTGTCGGCCTGCCTG Lcho_2798 3082775 - 3084025 + | acetate kinase Lcho_2799 3084323 - 3084063 - | hypothetical protein Lcho_2800 3084504 - 3085088 + | nuclease TERM 1567 3085172 - 3085149 - f 78 -13.8 -3.23274 | GCGCCCACAATCCAA GGACAGCGCC CCGA GGCGCAGTCC GACCCGGAGGACCTG TERM 1568 3085945 - 3085898 - g 71 -14.9 -3.06796 | opp_overlap 3085891 3085885 CTGCAGGCGATCGAA CGCGGCG-CGCCGGTCGACCTGG TGTT CCAG-TCGATCGGCGGCACCGAG GCCACGAATCGCAGC Lcho_2801 3085190 - 3086611 + | ethanolamine ammonia lyase large subunit TERM 1569 3087111 - 3087085 - g 79 -13.6 -3.62046 | GCACTGGTCGAAGAA GGCCGCGTCGCC ATC GGTGACGAGGCC GGCCACGGCCTGCGG Lcho_2802 3086608 - 3087468 + | ethanolamine ammonia-lyase Lcho_2803 3087750 - 3087454 - | hypothetical protein TERM 1570 3088095 - 3088074 - R 71 -9.5 -3.73858 | gap 1, opp_overlap 3088075 3088076 3088078, overlap 3088070 3088075 3088078 GCACAGGAAAATCAA CGGATCAGGC CGT GCCTGATC-G TTCTGGCCTCTCGTG Lcho_2804 3090041 - 3088245 - | serine/threonine protein kinase Lcho_2805 3090251 - 3090580 + | thioredoxin TERM 1571 3090973 - 3090954 - g 80 -3.4 -4.77036 | TGCGATCATGAAAAA GCGCGCCC GGCA AGGCGAAC AAATCTTCGGCGACG Lcho_2806 3090832 - 3092094 + | transcription termination factor Rho Lcho_2807 3092229 - 3092486 + | ribosomal protein L31 TERM 1572 3092550 - 3092535 - f 71 -10.4 -3.59979 | opp_overlap 3092535, overlap 3092515 TGCCTTGACTCGAAA GGCAGC CCAG GCTGCC TTTTTTATTGCCTCG TERM 1573 3092535 - 3092550 + F 100 -10.4 -5.4833 | opp_overlap 3092515 3092535 TGCCTTGACTCGAAA GGCAGC CCAG GCTGCC TTTTTTATTGCCTCG Lcho_2808 3092672 - 3094285 + | hypothetical protein Lcho_2809 3095640 - 3094303 - | PAS/PAC sensor signal transduction histidine kinase Lcho_2810 3096459 - 3095755 - | phosphate uptake regulator, PhoU Lcho_2811 3097274 - 3096489 - | phosphate ABC transporter, ATPase subunit TERM 1574 3097217 - 3097233 + g 73 -13.7 -3.37959 | opp_overlap 3097212 CGTAGTAGAAGTTCA GGTCGCG CAC CGCGACC TTGGTCTTGACGTTC Lcho_2812 3098157 - 3097291 - | phosphate ABC transporter, inner membrane subunit PstA Lcho_2813 3099125 - 3098157 - | phosphate ABC transporter, inner membrane subunit PstC TERM 1575 3098851 - 3098822 - G 76 -9.2 -4.25104 | overlap 3098823 3098837 GTTCGGTGAGGAAAA GCGCGATGCCGA AACTCA CCGGCACCGCGA TCAGCAGGGCGATGA Lcho_2814 3100247 - 3099195 - | phosphate ABC transporter, periplasmic phosphate-binding protein Lcho_2815 3101727 - 3100393 - | phosphoglucosamine mutase Lcho_2816 3102622 - 3101795 - | dihydropteroate synthase TERM 1576 3102695 - 3102680 - R 80 -11.8 -3.78329 | opp_overlap 3102680 3102677, overlap 3102661 CGGCACCAATGCAAA CGGGGC CGAA GCCCCG TCATTGTGTTTCACC Lcho_2817 3104626 - 3102722 - | ATP-dependent metalloprotease FtsH Lcho_2818 3105490 - 3104792 - | ribosomal RNA methyltransferase RrmJ/FtsJ Lcho_2819 3105586 - 3105993 + | hypothetical protein TERM 1577 3106035 - 3106002 - T 82 -16 -3.11687 | gap 1 CGAATGAGCACGCAA CCCGTCCAC-CGCCG GTTCG CGGCGAGTGGGCGGG TTCAGAGCGGAACGC Lcho_2820 3106492 - 3106037 - | hypothetical protein TERM 1578 3106273 - 3106216 - G 72 -3.6 -4.54047 | gap 5, overlap 3106218 3106252 GCACGGTACAGAAAA GCGCCCCGAGCACCAGCAGGATCTCGGCG GACAT CACCGAGA-CCTGC-G-C-CTCCGG-CGC CTTCGCGGCACGGTC Lcho_2821 3106980 - 3106504 - | transcription elongation factor GreA TERM 1579 3107059 - 3107016 - R 100 -13 -5.7946 | opp_overlap 3107018, overlap 3107019 3107044 GGGTGAACAAAAAAA TGAGCCGCCGACGGCCTCCT GTAC AGGAGGCTGGCAGCGGCAGA CGCGATGCAAACAGT TERM 1580 3107056 - 3107019 - R 100 -19.1 -3.60957 | opp_overlap 3107018, overlap 3107016 3107044 TGAACAAAAAAATGA GCCGCCGACGGCCTCCT GTAC AGGAGGCTGGCAGCGGC AGACGCGATGCAAAC Lcho_2822 3110350 - 3107075 - | carbamoyl-phosphate synthase, large subunit Lcho_2823 3111527 - 3110343 - | carbamoyl-phosphate synthase, small subunit TERM 1581 3111061 - 3111089 + g 85 -16.8 -3.48395 | gap 1, opp_overlap 3111030 CTGGGGGCCTTGCGG GCCA-GCGCGACG GCCT CGTCGCGCATGGC TTGTGTCACGACGGT TERM 1582 3111710 - 3111688 - R 71 -12.7 -2.94099 | gap 1, opp_overlap 3111673 3111706, overlap 3111673 CCGCGGGATTATAGA CGGCCGCGGG TTTT CCC-CGGCCG CTGCGACCTACTTTG Lcho_2824 3112145 - 3111738 - | hypothetical protein Lcho_2825 3112327 - 3113022 + | hypothetical protein TERM 1583 3113062 - 3113081 + T 100 -15 -5.26316 | opp_overlap 3113062 TCCCTGAATGAAGAA GGGGCTCC GAGA GGAGCCCC TTTTTTCTGACCTGC TERM 1584 3113081 - 3113062 - T 89 -15 -3.81146 | opp_overlap 3113062 TCCCTGAATGAAGAA GGGGCTCC GAGA GGAGCCCC TTTTTTCTGACCTGC Lcho_2826 3114531 - 3113110 - | replicative DNA helicase TERM 1585 3114662 - 3114638 - R 100 -17.2 -4.07877 | opp_overlap 3114641, overlap 3114586 3114641 GGAGCGCACAAACAA CAAGGCCGGC ATGAA GCCGGCCTTG TCAGGTCCATCGCAG TERM 1586 3114641 - 3114659 + r 77 -13.1 -3.33492 | opp_overlap 3114641 3114638 GCGCACAAACAACAA GGCCGGC ATGAA GCCGGCC TTGTCAGGTCCATCG TERM 1587 3114659 - 3114641 - R 89 -13.1 -4.15703 | opp_overlap 3114641, overlap 3114638 GCGCACAAACAACAA GGCCGGC ATGAA GCCGGCC TTGTCAGGTCCATCG Lcho_2827 3115162 - 3114710 - | ribosomal protein L9 Lcho_2828 3115458 - 3115174 - | ribosomal protein S18 Lcho_2829 3115777 - 3115469 - | primosomal replication protein N TERM 1588 3115598 - 3115556 - G 76 -12.1 -3.85698 | overlap 3115557 CTGCTTGCCGAGAAA GC-CGGTGAACTCGGCGGTGG TGC CCACCGC-AAGTCGACCGAGC TCCAGGGCGACATCC Lcho_2830 3116187 - 3115822 - | ribosomal protein S6 Lcho_2831 3118415 - 3116304 - | Na+/solute symporter Lcho_2832 3118705 - 3118433 - | hypothetical protein Lcho_2833 3121247 - 3118851 - | phosphoenolpyruvate synthase TERM 1589 3121308 - 3121324 + H 75 -3.6 -4.7373 | GCACAGGCCGACCCA CAGCGC TTTAT GGGCTG TTTTTCGTGGCGTGG TERM 1590 3121766 - 3121780 + G 75 -5.6 -4.58395 | opp_overlap 3121766 GCAGCTGACCAGCAA CCACCG CGT CGGTCG TTTTTCGGACGTGGC Lcho_2834 3121446 - 3122267 + | hypothetical protein Lcho_2835 3123129 - 3122296 - | tRNA/rRNA methyltransferase (SpoU) Lcho_2836 3123785 - 3123129 - | ribonuclease H Lcho_2837 3124902 - 3123757 - | lipid-A-disaccharide synthase Lcho_2838 3125726 - 3124932 - | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase Lcho_2839 3126187 - 3125741 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Lcho_2840 3127212 - 3126184 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Lcho_2841 3127807 - 3127283 - | outer membrane chaperone Skp (OmpH) Lcho_2842 3130119 - 3127807 - | outer membrane protein assembly complex, YaeT protein TERM 1591 3128802 - 3128826 + g 86 -7.8 -4.86621 | gap 1, opp_overlap 3128773 3128797, overlap 3128802 CGCTAGAGAAGCTCG CCC-CCAGCAG CAGG CTGCCGGTGGG TTTTTCCTTCACGCT Lcho_2843 3131599 - 3130124 - | membrane-associated zinc metalloprotease Lcho_2844 3132814 - 3131606 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lcho_2845 3133647 - 3132811 - | phosphatidate cytidylyltransferase Lcho_2846 3134430 - 3133657 - | undecaprenyl diphosphate synthase Lcho_2847 3135012 - 3134452 - | ribosome recycling factor Lcho_2848 3135765 - 3135055 - | uridylate kinase TERM 1592 3135848 - 3135816 - R 89 -17 -3.18274 | gap 1 TTTAGGTCAAGCCAA CCGCGCGGACACCGG AAGC CCGG-GTCCGCGCCG CTGACTCACTGACCC Lcho_2849 3136774 - 3135854 - | translation elongation factor Ts TERM 1593 3136851 - 3136835 - R 100 -13.7 -5.4477 | AAATCTTGAAAAAAA GGGGCTG AAT CAGCCCC TTGCACAGCGAGCCG Lcho_2850 3137620 - 3136874 - | ribosomal protein S2 Lcho_2851 3137914 - 3139155 + | amidase Lcho_2852 3139155 - 3140522 + | D-amino-acid dehydrogenase Lcho_2853 3140519 - 3140980 + | hypothetical protein TERM 1594 3141171 - 3141136 - g 71 -14.6 -3.06501 | CACACGCTGATGCAA CGCGCCGGCCAGGCGC TGGC ACGGCTGGCCATCGCG CTGGCGCCGCACAGT Lcho_2854 3140983 - 3142629 + | carbohydrate kinase, YjeF related protein Lcho_2855 3144851 - 3142650 - | ribonuclease R TERM 1595 3143567 - 3143603 + g 70 -2.2 -4.58395 | gap 1, overlap 3143568 3143570 TCAGGACGAAACCGA GGC-CCATGCTGCGCAG GTAG TTCTGCAGCGTGGTGCG TTTTTCGGGCGTCGG TERM 1596 3145083 - 3145050 - R 84 -16.9 -2.83403 | opp_overlap 3145051 3145054 3145057, overlap 3145054 3145057 TCCTGGGCACCAAAC TCAATAATGGCCAGC ACAT GCTGGCCATTATTGT TTGTGGCGGCGAGAA TERM 1597 3145051 - 3145082 + r 100 -20.4 -3.85698 | opp_overlap 3145050 3145054 3145057, overlap 3145054 3145057 CCTGGGCACCAAACT CAATAATGGCCAGC ACAT GCTGGCCATTATTG TTTGTGGCGGCGAGA TERM 1598 3145054 - 3145079 + r 95 -16.3 -4.06419 | opp_overlap 3145054 3145050 3145057, overlap 3145051 3145057 GGGCACCAAACTCAA TAATGGCCAGC ACAT GCTGGCCATTA TTGTTTGTGGCGGCG TERM 1599 3145079 - 3145054 - R 90 -16.3 -3.30701 | opp_overlap 3145051 3145054 3145057, overlap 3145050 3145057 GGGCACCAAACTCAA TAATGGCCAGC ACAT GCTGGCCATTA TTGTTTGTGGCGGCG TERM 1600 3145076 - 3145057 - R 86 -13.6 -3.78904 | opp_overlap 3145054 3145051 3145057, overlap 3145054 3145050 CACCAAACTCAATAA TGGCCAGC ACAT GCTGGCCA TTATTGTTTGTGGCG TERM 1601 3145057 - 3145076 + r 93 -13.6 -4.15703 | opp_overlap 3145057 3145054 3145050, overlap 3145054 3145051 CACCAAACTCAATAA TGGCCAGC ACAT GCTGGCCA TTATTGTTTGTGGCG TERM 1602 3145204 - 3145185 - R 100 -12.8 -5.4833 | opp_overlap 3145184 3145185 3145202 CGACCCAATAAAAAA GCGGGCCA CAGA CGGCCCGC CTTCTGACGACGGCG Lcho_2856 3145764 - 3145243 - | phosphoribosyltransferase Lcho_2857 3147134 - 3145797 - | adenylosuccinate synthase Lcho_2858 3148345 - 3147182 - | tRNA synthetase class II (G H P and S) Lcho_2859 3148590 - 3148402 - | hypothetical protein Lcho_2860 3149488 - 3148601 - | HflC protein Lcho_2861 3150687 - 3149506 - | HflK protein Lcho_2862 3152071 - 3150833 - | GTP-binding proten HflX TERM 1603 3150944 - 3150915 - G 71 -6.3 -4.26903 | gap 1, overlap 3150919 GGCACGGGATCAAAA CGGACATCGGCCAG AGG CTGGCCG-CGACGG GCGTCGGCGTCGAGA TERM 1604 3150962 - 3150997 + g 73 -14 -3.34344 | gap 1, opp_overlap 3150963, overlap 3150963 GTCGGCGTCGAGAGA AGCCTGGGCG-ATCGCG CGG CGCAATGCGCCCAGGCC TTCGTTGGCCGCTGC TERM 1605 3150963 - 3150996 + g 75 -17.5 -2.60392 | gap 1, opp_overlap 3150963, overlap 3150962 TCGGCGTCGAGAGAA GCCTGGGCG-ATCGCG CGG CGCAATGCGCCCAGGC CTTCGTTGGCCGCTG TERM 1606 3150996 - 3150963 - G 93 -19.7 -3.48276 | gap 1, opp_overlap 3150962 3150963 TCGGCGTCGAGAGAA GCCTGGGCG-ATCGCG CGG CGCAATGCGCCCAGGC CTTCGTTGGCCGCTG TERM 1607 3151275 - 3151263 - G 71 -9.1 -4.07687 | AGCGTGGCCTGAAAA GCCTC CAC GAGGC TGTGCGGCAGATCGC Lcho_2863 3152355 - 3152113 - | RNA chaperone Hfq Lcho_2864 3153771 - 3152425 - | small GTP-binding protein Lcho_2865 3154968 - 3153805 - | outer membrane assembly lipoprotein YfgL Lcho_2866 3155639 - 3154965 - | hypothetical protein Lcho_2867 3157077 - 3155776 - | histidyl-tRNA synthetase TERM 1608 3156570 - 3156527 - G 72 -12.4 -3.53091 | gap 1, opp_overlap 3156566, overlap 3156529 AGGTGCTGCTCGAAA TAGG-CGATCAGCGCGGCACG GTG CGCGCGGCGCTCATCGGCCTG GCCCAGGCTGTTGAG TERM 1609 3156567 - 3156529 - G 75 -15.2 -3.34398 | opp_overlap 3156566, overlap 3156527 GTGCTGCTCGAAATA GGCGATCAGCGCGGCACG GTG CGCGCGGCGCTCATCGGC CTGGCCCAGGCTGTT TERM 1610 3156816 - 3156853 + g 77 -14.8 -3.43203 | opp_overlap 3156791 CCGCGCGCACCACGC CGGCGGTGCCCTCGGG GCGCAG CGTGAGGGCGTCGCCG TTCATCTTGTCCTCG TERM 1611 3157132 - 3157101 - R 100 -10 -5.00616 | gap 1, overlap 3157104 3157106 TGTCTTCTGAAAAAA CAAGGCCGGCCACGC ACC GCG-GGCCGGACCGG ATCTGACGTGCCGTT TERM 1612 3157129 - 3157104 - R 100 -12.5 -4.61482 | gap 1, overlap 3157101 3157106 CTTCTGAAAAAACAA GGCCGGCCACGC ACC GCG-GGCCGGAC CGGATCTGACGTGCC TERM 1613 3157127 - 3157106 - R 70 -13.7 -2.60977 | gap 1, overlap 3157104 3157101 TCTGAAAAAACAAGG CCGGCCACGC ACC GCG-GGCCGG ACCGGATCTGACGTG Lcho_2868 3158439 - 3157147 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TERM 1614 3157297 - 3157270 - G 82 -18.4 -3.14132 | CTCGCCGTCGATGAA CACCGGCGCGGC CGGC GCCTCGCCGGTG CCGGGCAGGCTGATG Lcho_2869 3159347 - 3158448 - | hypothetical protein Lcho_2870 3160260 - 3159340 - | type IV pilus biogenesis/stability protein PilW Lcho_2871 3161502 - 3160321 - | radical SAM protein TERM 1615 3161577 - 3161522 - R 100 -19.9 -3.54029 | gap 2, opp_overlap 3161521, overlap 3161519 3161523 TGCCAGGAAGTAGAA GCCGGCTGCAAGGCCCGCCTCGAACCG ATCG CGGCTCGAGGCAG-C-TTGCAGCCAGG GGTTCCTCAGCGGCT TERM 1616 3161576 - 3161523 - R 100 -23.4 -2.72096 | gap 2, opp_overlap 3161521, overlap 3161519 3161522 GCCAGGAAGTAGAAG CCGGCTGCAAGGCCCGCCTCGAACCG ATCG CGGCTCGAGGCAG-C-TTGCAGCCAG GGGTTCCTCAGCGGC Lcho_2872 3162009 - 3161584 - | nucleoside-diphosphate kinase TERM 1617 3162118 - 3162170 + r 71 -10.4 -3.65046 | gap 2 CCCTGCCGCATGCAG GCCCGGCAGGTCAGCGGCGGCGACCG CCA CGGCCGCGGTT-CGGACC-GCCCGGC TTGTTGAAATAGGCA Lcho_2873 3164338 - 3162128 - | pseudouridine synthase Lcho_2874 3164969 - 3164349 - | segregation and condensation protein B Lcho_2875 3166387 - 3165278 - | RluA family pseudouridine synthase TERM 1618 3165956 - 3165989 + g 75 -14.5 -3.35679 | gap 1 GGTGCCGCTCCAGTG GCCCGCC-GCCGGGTG CAC CACCAGGCCGGCCGGC TTGTCGATGACCAGC Lcho_2876 3166400 - 3167254 + | putative transmembrane protein Lcho_2877 3169240 - 3167264 - | helicase c2 TERM 1619 3168967 - 3168917 - G 80 -17.4 -3.14132 | GCGGCCCTTCAGCAA GGCGACCTGCACCGGCAGGCCCAG CAG CTGCACCAGCCGCGGCAGGTCGCG CAGATAGAGCTGATC Lcho_2878 3169440 - 3169237 - | hypothetical protein Lcho_2879 3169494 - 3170261 + | protein serine/threonine phosphatase Lcho_2880 3171410 - 3170310 - | AFG1 family ATPase TERM 1620 3171465 - 3171446 - R 100 -12.8 -4.82855 | CAGGAAATGGAAAAA GGGGCGAC TCGC GCCGCCCC CGTTCGGGATCAGAC Lcho_2881 3172920 - 3171493 - | dihydrolipoamide dehydrogenase Lcho_2882 3173287 - 3172943 - | phage shock protein C, PspC TERM 1621 3173133 - 3173112 - G 77 -17.3 -2.87211 | opp_overlap 3173124 AGCCCGCCGCAGACA CCGGCGACC CAGC GGTCGCCGG CCGAGCGGCGAAAGT Lcho_2883 3174585 - 3173344 - | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase TERM 1622 3174692 - 3174647 - R 86 -14.7 -3.53012 | gap 1, opp_overlap 3174649, overlap 3174649 3174652 GCCCGGCCGGTCAAA CACACGCGGTGGAGAC-GGCGC GCG GCGCCCGCCTCCACCACCCGTT ACATCACTTGGTCAG TERM 1623 3174690 - 3174649 - R 93 -17.3 -3.34398 | gap 1, opp_overlap 3174649, overlap 3174647 3174652 CCGGCCGGTCAAACA CACGCGGTGGAGAC-GGCGC GCG GCGCCCGCCTCCACCACCCG TTACATCACTTGGTC TERM 1624 3174687 - 3174652 - R 91 -19.8 -2.54325 | gap 1, opp_overlap 3174649, overlap 3174649 3174647 GCCGGTCAAACACAC GCGGTGGAGAC-GGCGC GCG GCGCCCGCCTCCACCAC CCGTTACATCACTTG Lcho_2884 3177548 - 3174696 - | 2-oxoglutarate dehydrogenase, E1 subunit Lcho_2885 3178823 - 3177810 - | hypothetical protein Lcho_2886 3179128 - 3179898 + | IclR family transcriptional regulator Lcho_2887 3180888 - 3179917 - | peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 TERM 1625 3180101 - 3180122 + g 76 -7.9 -4.36914 | opp_overlap 3180101 ATGACCAGGCAACGA CCGGCTTCG ACGA TGTAGCCGG TTTTCTGCAGCCCGA Lcho_2888 3182662 - 3181121 - | 2-isopropylmalate synthase Lcho_2889 3184389 - 3182674 - | 2-isopropylmalate synthase TERM 1626 3183615 - 3183643 + g 75 -15.3 -3.31144 | CCATGATCGCCAGCT CGGCCGCGGCA GTGCCGG TGCCGCGGTCG TTGTGCGGATGCACG TERM 1627 3184465 - 3184493 + r 72 -13.2 -3.17075 | gap 2, opp_overlap 3184465 ACAGACAAAAGAAAA CGGCCCGC--TGCG TTG CGCAAAGCGGGCCG TTGACTTGAAAAAGG TERM 1628 3184493 - 3184465 - R 100 -13.8 -5.24647 | opp_overlap 3184465 ACAGACAAAAGAAAA CGGCCCGCTGCG TTGCG CAAAGCGGGCCG TTGACTTGAAAAAGG Lcho_2890 3185477 - 3184635 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 1629 3185582 - 3185565 - R 100 -12.7 -5.14163 | ATGCACCAACAAAAA GGCCACC CGAA GGTGGCC CGATCAGCGCGCAAG Lcho_2891 3186619 - 3185603 - | ketol-acid reductoisomerase TERM 1630 3185848 - 3185861 + g 70 -9.5 -3.75024 | GGCCGGTCACGTACT CGCCG TATT CGGCG TTGTTGCTGATCGAG TERM 1631 3186718 - 3186691 - R 88 -9.8 -4.65895 | opp_overlap 3186691, overlap 3186715 3186717 GGCTCCACCGAAAAA CCTGTCGCCGGG CCGC CCCAAAGACAGG TTTTGCGCCCCCTCG Lcho_2892 3187277 - 3186786 - | acetolactate synthase, small subunit TERM 1632 3187384 - 3187374 - R 74 -4.6 -4.57837 | opp_overlap 3187375, overlap 3187375 3187376 AGACTGCCGCAAAAA GCCG GCT CGAC ACCCGTCGGGCAGCT Lcho_2893 3189210 - 3187432 - | acetolactate synthase, large subunit, biosynthetic type TERM 1633 3189351 - 3189326 - H 71 -7.6 -4.07568 | gap 2, overlap 3189327 3189330 CCTGCGCTGTCAAAA CGGAGCCACCCG GGGT CGGGTGGC-C-G AAACTGACCAGTCCG TERM 1634 3189349 - 3189330 - H 75 -15 -2.74605 | overlap 3189326 3189327 CGCTGTCAAAACGGA GCCACCCG GGGT CGGGTGGC CGAAACTGACCAGTC Lcho_2894 3189500 - 3190066 + | ECF subfamily RNA polymerase sigma-24 factor Lcho_2895 3190063 - 3190554 + | putative transmembrane protein Lcho_2896 3190617 - 3191309 + | hypothetical protein Lcho_2897 3191306 - 3191866 + | RDD domain-containing protein Lcho_2898 3191914 - 3192294 + | diacylglycerol kinase TERM 1635 3192335 - 3192310 - T 100 -14.7 -5.17353 | AGACGCATGAAAAAA GCCCGTTCAGC CGAA GCGGAACGGGC GTCCTGACCCGCCGC Lcho_2899 3192709 - 3192371 - | nitrogen regulatory protein P-II Lcho_2900 3194482 - 3192818 - | ABC transporter-related protein TERM 1636 3193714 - 3193724 + g 70 -2.4 -4.51174 | CGGTGCGCTGCTCCA GCTC GAG GCGC TTTTCCTTCTGCTCG Lcho_2901 3194692 - 3195540 + | hypothetical protein TERM 1637 3195984 - 3196035 + GF 76 -14.3 -3.09492 | gap 2 CTCGCCCACGCCCCG CCCG-CGCAGCG-GCAGCGCCGCTG CGTC CAGCTGCGCAGCACGCGCCGACGGG TGTTGGCGTTGCCGC TERM 1638 3197120 - 3197132 + GF 73 -9.1 -3.86015 | opp_overlap 3197113, overlap 3197113 3197111 CGACGACAGCCCGGC CCAGC CGC GCTGG TTTCTGCACGGCCTG Lcho_2902 3195513 - 3197156 + | hypothetical protein TERM 1639 3198175 - 3198186 + G 76 -3.6 -4.72986 | CTGGTGGCCGAGATG CGCT ACGA GGCG TTTTTCCTGACCGTG Lcho_2903 3197161 - 3200490 + | DNA polymerase III, alpha subunit Lcho_2904 3200674 - 3201180 + | putative type 4 fimbrial biogenesis transmembrane protein Lcho_2905 3201174 - 3201812 + | Tfp pilus assembly protein FimT Lcho_2906 3201857 - 3202276 + | hypothetical protein Lcho_2907 3202286 - 3203452 + | type IV pilus assembly protein PilW Lcho_2908 3203463 - 3204140 + | type IV pilus assembly protein PilX TERM 1640 3207209 - 3207196 - g 73 -9.5 -3.9461 | overlap 3207197 CGGCCTCAACAACAA CGCCG GCTC CGGCG ACGGCGTCGGCCGCC Lcho_2909 3204161 - 3208090 + | type IV fimbrial biogenesis protein PilY1 Lcho_2910 3208096 - 3208881 + | TonB family protein Lcho_2911 3209836 - 3208901 - | histone deacetylase superfamily protein TERM 1641 3210666 - 3210617 - g 76 -15.6 -3.14564 | gap 1 GCAGCCGGTGATGAA CGGCGAGCAGCTGCTG-GCCGCG CAGGC CGCGGTGCTGCAGGTGCACGCCG CGCCGGCCCTGCTCG Lcho_2912 3209889 - 3210938 + | ATPase Lcho_2913 3210938 - 3212026 + | hypothetical protein TERM 1642 3212394 - 3212420 + G 74 -2 -4.74801 | opp_overlap 3212383, overlap 3212397 3212399 3212400 AAGACGCTGGAGCTG CGGGCCCGCCGC GAC GCGCTGGTGCTG TTTTTCCTCGGCTTC TERM 1643 3212747 - 3212761 + G 86 -5.6 -5.00616 | opp_overlap 3212746 3212743, overlap 3212743 GCTGGACGACAGCAC CGCGCT GCG GGTGCG TTTTTTCGGCCCGGC TERM 1644 3213561 - 3213506 - g 71 -15.2 -3.01712 | gap 1 CGCCTGGGCCGAATA CTGGCGCGCCGGCGACGGCTGGGTGCG CGT CG-ACCCCACCGCCGCGGTGGCGCCCG ACCGCATCCAGCGCA Lcho_2914 3212028 - 3214148 + | transglutaminase domain-containing protein Lcho_2915 3214160 - 3214558 + | lactoylglutathione lyase TERM 1645 3217102 - 3217056 - g 70 -12.9 -3.35679 | GTGGGCGATCGAGAA CGCCGATGCCACGCTGGCGCT GATCG AGCGCCTGCACAGCCTCAACG CGGTGGCCGCGCTCG Lcho_2916 3214600 - 3218949 + | non-specific serine/threonine protein kinase TERM 1646 3219416 - 3219450 + G 73 -10.6 -3.75578 | overlap 3219420 GCGGTGGTCACGGTG CTGCGCAACGGCACCA CGC TGGTGGCGATGCTCGG TTATCTGTTCTATCT Lcho_2917 3218996 - 3220726 + | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA TERM 1647 3220751 - 3220768 + T 89 -12.7 -4.00042 | opp_overlap 3220751 CAGCGGAATGAAAAA CGGCCTC CGAG GAGGCCG TTGTTTCGTCCGGAA TERM 1648 3220768 - 3220751 - T 100 -12.7 -4.87291 | opp_overlap 3220751 CAGCGGAATGAAAAA CGGCCTC CGAG GAGGCCG TTGTTTCGTCCGGAA Lcho_2918 3221418 - 3220795 - | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase Lcho_2919 3223289 - 3221445 - | 6-phosphogluconate dehydratase TERM 1649 3223169 - 3223146 - G 72 -13.2 -3.54424 | gap 1 CGGCAGCGCGGCAAA GGCGTGCGCCA CGT TGGCGCA-GCC CATGCGGTCGGCGCC Lcho_2920 3223401 - 3224129 + | ChaC family protein Lcho_2921 3224733 - 3224083 - | hypothetical protein Lcho_2922 3224987 - 3225622 + | pyridoxamine 5'-phosphate oxidase Lcho_2923 3226234 - 3225659 - | peptide methionine sulfoxide reductase TERM 1650 3226160 - 3226138 - G 71 -6.2 -4.26076 | overlap 3226157 CGACCTGCAGGAAAA CCGCCTCCAG GCA CCAGAAGCAG CCGCCGCCGAGCGTG TERM 1651 3226917 - 3226887 - g 71 -8.8 -4.10657 | overlap 3226863 CGACACGCGCGAAAA CGCCAGCGGCACGG TCG CCATGCTGCGCGCG GCGGGCGTGCGGCGC Lcho_2924 3226327 - 3227142 + | hypothetical protein TERM 1652 3227225 - 3227185 - T 75 -10.5 -3.86015 | opp_overlap 3227193, overlap 3227189 3227191 GACGCGTCGCACAAA CAGATACCCGCCCG-GGAC GTGCT GTCCGCGGGCGGGCCT-TG GAGGCCTGCGGCCGC TERM 1653 3227222 - 3227189 - T 73 -12.4 -3.3353 | gap 1, opp_overlap 3227193, overlap 3227185 3227191 CGTCGCACAAACAGA TACCCGCCCG-GGAC GTGCT GTCCGCGGGCGGGCC TTGGAGGCCTGCGGC TERM 1654 3227220 - 3227191 - T 91 -17.2 -3.23335 | gap 1, opp_overlap 3227193, overlap 3227189 3227185 TCGCACAAACAGATA CCCGCCCG-GGAC GTGCT GTCCGCGGGCGGG CCTTGGAGGCCTGCG Lcho_2925 3229028 - 3227454 - | UbiD family decarboxylase TERM 1655 3229049 - 3229036 - H 71 -4.5 -4.46926 | TAGTTCATCACAAAA GAAGC TAAC GCCTC GATCTCTCATGGTTG TERM 1656 3230213 - 3230193 - g 78 -8.2 -4.33153 | overlap 3230195 CGCAAGAGCAACAAA CCCGAGCG ACTGG CGCTCGCG CAGTGAGTCTGGCGG Lcho_2926 3229284 - 3230219 + | lytic transglycosylase catalytic TERM 1657 3230220 - 3230251 + F 78 -13 -3.53012 | GCGCTCGCGCAGTGA GTCTGGCGGGAGCC GACG GGCTTCCGCTACAC TTTCGACACCACGCA Lcho_2927 3230458 - 3231705 + | glycine hydroxymethyltransferase Lcho_2928 3231825 - 3232268 + | ATP-cone domain-containing protein Lcho_2929 3232389 - 3232955 + | general secretion pathway protein H Lcho_2930 3232949 - 3233398 + | type IV pilus assembly protein Lcho_2931 3233404 - 3234114 + | fimbrial biogenesis protein TERM 1658 3234646 - 3234623 - g 75 -15.2 -3.30243 | AGCCACCTCGGACAA GGCTGCGGCG GCAG CGCCGCGGCC GACGCACGCGCCGAG TERM 1659 3234894 - 3234927 + G 72 -11.7 -3.64703 | gap 1, opp_overlap 3234870 CCGACGACCCGTCGC TGG-GCGGCGACAGCG ACG CGCTGTGGCGGCGCCA TTTCGGTGCCGGCGC Lcho_2932 3234095 - 3235369 + | fimbrial biogenesis protein Lcho_2933 3235366 - 3236547 + | hypothetical protein TERM 1660 3237224 - 3237193 - g 70 -14.4 -3.14344 | gap 1 CACCGCGCTGATGAA CGGCCAGAGCCAGTG GAT CACCGGCGC-GGCCG CACGCGCCGACGGCC Lcho_2934 3236621 - 3237871 + | riboflavin biosynthesis protein RibD Lcho_2935 3237919 - 3239010 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 1661 3239103 - 3239075 - g 74 -2.1 -4.75404 | overlap 3239079 AAACGCCATGAAAAA CGCAGACCGGGGC GTC GCCGCGGAACTCG ACGGATCGGACCTGC TERM 1662 3239507 - 3239472 - g 80 -6.7 -4.72272 | gap 1 CGTGCCGACGAAAAA GGCCGTGACG-CCGCG CGTGT CGCGGTCGAGATGGCC AATCTGATGGAAGAC Lcho_2936 3239067 - 3239531 + | 6,7-dimethyl-8-ribityllumazine synthase Lcho_2937 3239528 - 3240043 + | NusB antitermination factor TERM 1663 3240130 - 3240144 + F 81 -12.8 -3.57144 | CCTGAACCCGACCCC GGCCCG GAC CGGGCC TTTGCGCCTGGCCCG Lcho_2938 3240146 - 3241336 + | aminotransferase class I and II Lcho_2939 3241333 - 3242670 + | serine/threonine protein kinase Lcho_2940 3242690 - 3243127 + | tol-pal system-associated acyl-CoA thioesterase Lcho_2941 3243124 - 3243834 + | protein TolQ Lcho_2942 3243848 - 3244318 + | biopolymer transport protein ExbD/TolR Lcho_2943 3244322 - 3245338 + | protein TolA Lcho_2944 3245412 - 3246812 + | metal dependent phosphohydrolase TERM 1664 3247579 - 3247550 - g 71 -15 -3.05384 | CTCGGCGCCACCGAA CCGGTCGGTGCC CGCTGC GCCACCGACCGG CTGCTGCTGGCCGAC TERM 1665 3248516 - 3248506 - g 74 -4.6 -4.58283 | opp_overlap 3248509, overlap 3248507 CAACCTGCTCAAAAA CGCC GAC AGCG CGATGCACCGCGTCA Lcho_2945 3246824 - 3249370 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 1666 3249408 - 3249442 + F 74 -11.5 -3.68619 | gap 2 CCGCATGTCGGCGGG TCGGGGCGATGCGCGAC ACT GCCGCGCAT-GCCC-GA TTTCACTCCCTTCAC Lcho_2946 3249435 - 3249737 + | hypothetical protein Lcho_2947 3250878 - 3249754 - | 2-alkenal reductase Lcho_2948 3251005 - 3251121 + | hypothetical protein Lcho_2949 3251121 - 3252008 + | transporter DMT superfamily protein Lcho_2950 3252040 - 3253377 + | hypothetical protein Lcho_2951 3253805 - 3253395 - | PilT domain-containing protein Lcho_2952 3254052 - 3253819 - | hypothetical protein Lcho_2954 3255202 - 3254528 - | hypothetical protein Lcho_2955 3256251 - 3255202 - | hypothetical protein TERM 1667 3256109 - 3256134 + g 72 -3.3 -4.51378 | AACTGCCTTTGATAT TCTGGGG GAACATGAATAG CCCCAGA TTTTCTCATGTCAAT Lcho_2956 3257034 - 3256555 - | 3-demethylubiquinone-9 3-methyltransferase Lcho_2957 3257259 - 3257849 + | CBS domain-containing protein Lcho_2958 3257925 - 3258560 + | glutathione S-transferase domain-containing protein TERM 1668 3258670 - 3258683 + F 70 -5.9 -4.26076 | GTACGATCGAATTTT CCGCT TTCG GGCGG TTTTGATCAGGGTGC TERM 1669 3259430 - 3259404 - g 80 -16.7 -3.14132 | TCGCCCGCCGACGAA CTGCTGCAGGT GATGG ACCTGCAGCAG GAAACGCTGGCCCGG Lcho_2959 3258702 - 3260579 + | NERD domain-containing protein TERM 1670 3261279 - 3261310 + T 80 -15.1 -3.14229 | overlap 3261275 3261277 CTGCGGCGCCACGGG CCGCGCCGCGCAG CCAGTT CTGCTCGGTGCGG TATTGCTGGGCGTGT Lcho_2962 3263213 - 3262158 - | DNA/RNA non-specific endonuclease TERM 1671 3262472 - 3262428 - G 82 -18.5 -3.16564 | opp_overlap 3262421, overlap 3262457 GTGCGAGGCCAGGAA CAGGTCGTTGGCGGTGTCGTC GTA GACCACGCCGCCGGCGACCTG CACCGGCGCCAGGTC TERM 1672 3263275 - 3263261 - R 72 -8.6 -3.9461 | opp_overlap 3263261 GCCTGGCAACAAGAA TCGCTT TGA AAGCGA TCTTGAGTCGATCTG Lcho_2963 3263592 - 3263344 - | addiction module antitoxin Lcho_2964 3263846 - 3263604 - | prevent-host-death family protein TERM 1673 3263868 - 3263885 + H 75 -7 -4.36914 | opp_overlap 3263867 3263868 CTCCAAAACATAAAG CGTACG CTTAGT CGTACG TTTTGTCGACAAACC TERM 1674 3264517 - 3264486 - g 79 -17.2 -3.13403 | overlap 3264484 GCCGGTCTACGAACA CCGCGCGCCGCACG CCGC CGTGAGCCGCGCGG CCAAGCTGGCCAACG TERM 1675 3265298 - 3265337 + G 85 -13.6 -4.13767 | gap 1, opp_overlap 3265298 3265287 AGAAGGCCGACTACA CGCGGGT-GCTCAAGGGCA CGC TGGCCTTGAGCCGCACGCG TTTTCCGCTCGGCAC Lcho_2965 3263989 - 3265809 + | peptidase M24 Lcho_2966 3267596 - 3265806 - | methyl-accepting chemotaxis sensory transducer TERM 1676 3266066 - 3266086 + g 79 -18.3 -2.78384 | overlap 3266049 CGGCCTGCTGGCGCA GCGCGTCGG CGG CCGACGCGC TCTGCTCGACCAGCG Lcho_2967 3270835 - 3267977 - | hypothetical protein TERM 1677 3268891 - 3268934 + g 76 -7.2 -4.36914 | gap 1, opp_overlap 3268865, overlap 3268891 3268893 CGGTGCCGAACGCCA GCTCGGGCTCG-GCGCTGCGC CCG GCGATGCGCGCCAGCTCGGCC TTTTCTGCGGCAGCC Lcho_2968 3272601 - 3270868 - | NAD+ synthetase TERM 1678 3272642 - 3272626 - H 74 -5 -4.53034 | overlap 3272627 GGCAGACAAGGAAAA CGGCGC GATCA GCGGCG GCGACAAGGCCCCGG Lcho_2969 3272807 - 3273952 + | hypothetical protein Lcho_2970 3274188 - 3274637 + | hypothetical protein TERM 1679 3274659 - 3274633 - T 75 -3.6 -4.74215 | overlap 3274634 AGAGCATCAAGAAAA TCTGATCGGC GGCTCAG GCCGAGCCGA GCGCCCAGCGGCCGT Lcho_2971 3276439 - 3274646 - | ABC transporter TERM 1680 3276533 - 3276516 - R 100 -11.3 -5.64274 | opp_overlap 3276516 3276518 GGACGGACAAAAAAA GAGAGCC CGCA GGCTCTC TGTTCGGGTCGGCGC Lcho_2972 3277097 - 3276558 - | inorganic diphosphatase TERM 1681 3278077 - 3278034 - g 83 -16.6 -3.30124 | opp_overlap 3278034, overlap 3278035 GGTGATCGCCGACAA CGTCGGCGACAACGTCGGCG ACTG CGCCGGCATGGCCGCCGACC TGTTCGAGACCTACG TERM 1682 3278076 - 3278035 - g 85 -20.1 -2.57931 | opp_overlap 3278034, overlap 3278034 GTGATCGCCGACAAC GTCGGCGACAACGTCGGCG ACTG CGCCGGCATGGCCGCCGAC CTGTTCGAGACCTAC Lcho_2973 3277387 - 3279525 + | V-type H(+)-translocating pyrophosphatase TERM 1683 3279571 - 3279590 + F 100 -15 -5.14965 | CTGAACCGATCTCGA GGCGTGGC TGCG GCCACGCC TTTTTTCATGGGGAT Lcho_2974 3279829 - 3281070 + | polyhydroxyalkanoate depolymerase, intracellular TERM 1684 3281107 - 3281127 + F 100 -16.1 -5.75342 | opp_overlap 3281106 GGTGCCACAGCGAAT CGGGGCCGT CTT GCGGCCCCG TTTTTTTTACCCGCC Lcho_2975 3281143 - 3281817 + | electron transport complex, RnfABCDGE type, B subunit Lcho_2976 3282752 - 3281841 - | hypothetical protein TERM 1685 3282828 - 3282801 - H 72 -11.2 -3.45849 | opp_overlap 3282803 TCTACACCATCACAA CCGGCCGTTCAG GCAC CTGATCGGCCTG TGTAGGGGGGCAATC TERM 1686 3282981 - 3283006 + H 100 -9.1 -5.27938 | opp_overlap 3282981 CGCTTGGCAACAAAA GCTCTAGAG AATCAACG CTCTAGAGC TTTTTCTTTGCCCGT TERM 1687 3283006 - 3282981 - H 88 -9.1 -4.63218 | opp_overlap 3282981 CGCTTGGCAACAAAA GCTCTAGAG AATCAACG CTCTAGAGC TTTTTCTTTGCCCGT Lcho_2977 3283123 - 3284412 + | integrase family protein Lcho_2978 3284912 - 3285184 + | phage transcriptional regulator, AlpA Lcho_2979 3285184 - 3285459 + | hypothetical protein Lcho_2980 3285680 - 3285898 + | hypothetical protein Lcho_2981 3285891 - 3286097 + | hypothetical protein Lcho_2982 3286099 - 3286626 + | hypothetical protein TERM 1688 3287247 - 3287260 + G 72 -3.7 -4.56597 | GATGCCACCGGCATA GCCAC GGCT GCGGC TTTTTCGGCCGGCAA Lcho_2983 3286623 - 3287438 + | hypothetical protein Lcho_2984 3287435 - 3289063 + | hypothetical protein TERM 1689 3289192 - 3289162 - f 70 -7.5 -3.96291 | CACAAACCGCACAAA CCGCACAAACCAT GCCGA AGGGTCTGAGCGG TGCAGGTCGGTGCAG Lcho_2985 3289408 - 3289941 + | hypothetical protein Lcho_2986 3289916 - 3290386 + | hypothetical protein Lcho_2987 3290419 - 3290697 + | hypothetical protein Lcho_2988 3290684 - 3292486 + | peptidase U35 phage prohead HK97 TERM 1690 3292566 - 3292579 + F 87 -3.7 -5.15167 | AACATGGCCGCCACC CGCTG GCTA CTGCG TTTTTCTTCCTCCTC TERM 1691 3292678 - 3292660 - f 72 -13.1 -3.1585 | opp_overlap 3292660, overlap 3292658 CTATTCAACCCAACA GGGCGCC TTCGG GGCGCCC TTTGCACATGCGCAA TERM 1692 3292660 - 3292678 + F 84 -13.8 -3.57144 | opp_overlap 3292658 3292660 CTATTCAACCCAACA GGGCGCCT TCG GGGCGCCC TTTGCACATGCGCAA Lcho_2989 3292686 - 3293096 + | hypothetical protein TERM 1693 3293248 - 3293222 - T 81 -12.2 -3.9281 | opp_overlap 3293222 ACCACCGTCAAAGAA GGCTCACTCTCC GAT GGGGAGTGGGCC TTTTTCTTTGGTCAG TERM 1694 3293222 - 3293248 + T 100 -16.6 -5.33405 | opp_overlap 3293222 ACCACCGTCAAAGAA GGCTCACTCTCC GAT GGGGAGTGGGCC TTTTTCTTTGGTCAG Lcho_2990 3293818 - 3293345 - | cytochrome c family protein, putative TERM 1695 3293621 - 3293633 + g 74 -4.7 -4.59414 | overlap 3293616 GGCGTAGGTGTCGGT GCGCG GGC CGAGC TTTTCCTTCTTGTAG TERM 1696 3294703 - 3294724 + G 73 -13.7 -3.35046 | overlap 3294701 GATCGGACGCGGCCA CCCGAGCGG CAGC CTGCTCGGG TATTTCGCGCCCTAC Lcho_2991 3293978 - 3295684 + | hypothetical protein Lcho_2992 3296816 - 3295737 - | tartrate dehydrogenase Lcho_2993 3298493 - 3296856 - | vinylacetyl-CoA Delta-isomerase Lcho_2994 3298644 - 3299189 + | isochorismatase hydrolase Lcho_2995 3300063 - 3299215 - | protein of unknown function RIO1 TERM 1697 3299624 - 3299680 + g 76 -8.6 -4.2828 | gap 2, opp_overlap 3299649, overlap 3299589 3299622 AGCGTGGCGTGGTGG CGGCG-CGCGTCTTCGGGCGTGAA-GAC GAC GTCGTTCAGGCGCGGCGCGGCGTCGCCG TTTTCATCGGTCACC Lcho_2996 3302339 - 3300066 - | helicase domain-containing protein Lcho_2997 3302398 - 3303831 + | DEAD/DEAH box helicase domain-containing protein TERM 1698 3304291 - 3304233 - g 85 -16.9 -3.53224 | gap 4, overlap 3304238 CACCTGGGCCTCAAA GCCAAGCGCCTGGCCAGCAGCGCCGAGCG CCTGC CGCT-GGTGCCGCTG-CC-GGCGCT-GGC GCGCCTGCGCATCGA TERM 1699 3304293 - 3304238 - g 76 -16.2 -3.27525 | gap 3, overlap 3304233 GGGCCTCAAAGCCAA GCGCCTG-GCCAGCAGC-GC-CGAGCG CCTGC CGCTGGTGCCGCTGCCGGCGCTGGCGC GCCTGCGCATCGACA TERM 1700 3305828 - 3305780 - g 73 -13.8 -3.30441 | overlap 3305783 CAGTATCCGCGACAA CATCGCCATCGCCGACCCCG-GCG CGC CGCTCGAGG-CGGTGCTGGCGGTG GCGCAGCTGGCCGGG Lcho_2998 3304005 - 3306266 + | type I secretion system ATPase TERM 1701 3306409 - 3306380 - f 73 -9.9 -3.90744 | opp_overlap 3306400, overlap 3306381 GCCGCGCGCAAAGAA CTCGCCGGCCCGA AGCG CCTGGCCGACGAA CGCGCCTTTCTGCCC Lcho_3000 3307049 - 3307522 + | transposition helper protein TERM 1702 3308319 - 3308346 + G 75 -10.4 -3.98826 | GGGGTTTGCGGATCT GCAGGCCGCGCG CATG TGGGCGGCCGGC TTTGTGCATTGGTAC Lcho_3001 3307519 - 3308607 + | integrase catalytic region TERM 1703 3308889 - 3308856 - f 88 -17.5 -3.14564 | gap 1 GGAGCGCGCCACCAA GGCCCGGCTCGAACTG GCT CAGCTCG-GCCAGGCC GGGCGCAAGGCCGAC TERM 1704 3310147 - 3310128 - g 78 -2.8 -4.8622 | gap 1, overlap 3310134 3310135 TTCTTCAATGAAAAA CGAAGACGG CAG CC-TCATCG AGATAGGGTGCCAAG Lcho_3002 3309463 - 3310350 + | hypothetical protein TERM 1705 3310439 - 3310456 + T 70 -7.7 -3.96531 | opp_overlap 3310433, overlap 3310441 CGCAAGGAAGCGCCA TAGGTGC CTAC GCACCTG TTTATCGGTATGTGG TERM 1706 3312312 - 3312302 - T 100 -6.8 -5.30155 | TCATCAAGCAAAAAA GTCC GAC GGAC ACGACCAAATACGCT Lcho_3004 3315104 - 3314124 - | integrase catalytic region TERM 1707 3316680 - 3316712 + H 100 -4.7 -5.66229 | CCGCTTCGCAGTTAT TCCTAAGCGAGCAGG CAG CCGGTCCGCTTGAGA TTTTTTATTCTTCAT Lcho_3005 3317961 - 3318941 + | integrase catalytic region TERM 1708 3319846 - 3319792 - T 75 -14.3 -3.02263 | gap 1 ATACGTTGGCCAACA CCCTCAGCGGCAATGCCGCCG-CCAA TGCC TTGAACGGCGGCACTGGCGCAGACAG CATGTCGGGCGGCGC Lcho_3006 3322459 - 3321035 - | FAD linked oxidase domain-containing protein TERM 1709 3321614 - 3321664 + g 81 -8.9 -4.56597 | gap 2 GCTCGCCTCGATCAG CACGTACCACGGCGCGGCATCGGCC AGC GGGCGACGGC-TGCCG-GGCACGTG TTTTTCGACCAGGCC Lcho_3007 3323525 - 3322464 - | 2-nitropropane dioxygenase NPD Lcho_3008 3323694 - 3324119 + | hypothetical protein Lcho_3009 3324116 - 3324637 + | hypothetical protein TERM 1710 3324842 - 3324854 + G 71 -6.2 -4.24294 | GGGGGCTGGTGGGCA CGCG GCATG CGCG TTTTGCCTCGTTCGT Lcho_3010 3324634 - 3325344 + | cytochrome B561 Lcho_3011 3325356 - 3326021 + | two component transcriptional regulator TERM 1711 3326626 - 3326655 + G 72 -5.6 -4.38712 | gap 1, overlap 3326596 3326618 CCAGCGCGAGCCGCA GGCGCTCGACACG CTGCA CCTGCCG-GCGCC TTTTGTCGAGATGGC TERM 1712 3327223 - 3327264 + G 71 -6.3 -4.1711 | gap 1, overlap 3327219 GATCGACGACGGCGG CCCCGGCCTCGCCGACGCCG AGC TGGCG-CGGCTGGGCGAGCG TTTCTTCCGCGTGCT Lcho_3012 3326021 - 3327448 + | histidine kinase TERM 1713 3327530 - 3327485 - f 73 -9.6 -3.92522 | gap 2, opp_overlap 3327491 3327529 GCCGAACGGCAGAAA GC-GCCAGGCGGCGGC-CCGCA TACT TGCGGCGCGGCTGTCCGGCCGC CCGGCCGCGTGTGGC TERM 1714 3328033 - 3328001 - g 75 -14.7 -3.40403 | opp_overlap 3328026 GCTGCGCCAGCAGAA CGGCGGCTGCCACCC GAA GGACGGCTGCCGCGG CCCGCAGGACTTTCG TERM 1715 3328695 - 3328685 - g 76 -8.2 -4.27617 | overlap 3328686 GACACGCGAGGAAAA CGCC GCC GGCG AATCCGTCATCGGCC Lcho_3013 3327570 - 3329243 + | 5'-nucleotidase domain-containing protein Lcho_3014 3329323 - 3330405 + | phosphoserine aminotransferase Lcho_3015 3330398 - 3331606 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 1716 3331643 - 3331621 - f 74 -11.2 -3.67134 | overlap 3331609 3331623 AAACGACCGCAACAA CAGCCGGCCC GAT GAGCCGGCCA GGGGAGGAAACCGCG TERM 1717 3331641 - 3331623 - f 80 -13.8 -3.40878 | overlap 3331609 3331621 ACGACCGCAACAACA GCCGGCCC GAT GAGCCGGC CAGGGGAGGAAACCG TERM 1718 3331691 - 3331678 - g 83 -5.9 -4.87273 | overlap 3331680 AACAGGCGACAAAAA GCCCG CATC CGGAC AGTTTCGAAACACGC TERM 1719 3332178 - 3332134 - g 72 -16.4 -2.78384 | gap 2 TCGGCGTCGAGCAGA CCGCCACCGGC-GCGCTG-GTG CTG CACGCCGCGCTGCAGGCGGCGG GGCTGCGGCTCGAGC TERM 1720 3332468 - 3332516 + G 73 -15.2 -3.14344 | gap 2, overlap 3332510 GCCGCAGCGGCTGGC GCCGGGCATC-G-GCGCGCGCCTG GGC CTGGCGCCCGCGCAGGTGCCGGGC TTCCTGGACGGCCTG Lcho_3016 3331659 - 3332714 + | ABC-type nitrate/sulfonate/bicarbonate transport system protein Lcho_3017 3332711 - 3334462 + | putative PAS/PAC sensor protein Lcho_3018 3334468 - 3337911 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Lcho_3019 3338092 - 3339129 + | hypothetical protein Lcho_3020 3339879 - 3339160 - | GntR family transcriptional regulator TERM 1721 3339286 - 3339306 + g 73 -14.7 -3.22298 | CTTGCGCTGCAGCAC CGCGCGCAG GAT CTGCGCGTG TTCGTCGTAGGTGGC TERM 1722 3339733 - 3339691 - G 75 -12.5 -3.63515 | overlap 3339669 3339668 GCGCAGCCGGAACAA GGCCTCGCGCACCGGCGTG CGGCT CACGCCCAGGCGCGCGCCC ATCTCGGACTCGGTG Lcho_3021 3340588 - 3339890 - | isochorismatase hydrolase Lcho_3022 3342264 - 3340585 - | ABC transporter-related protein Lcho_3023 3343078 - 3342377 - | isochorismatase hydrolase Lcho_3024 3344015 - 3343092 - | inner-membrane translocator Lcho_3025 3345131 - 3344019 - | inner-membrane translocator Lcho_3026 3346292 - 3345147 - | basic membrane lipoprotein Lcho_3027 3346759 - 3346343 - | hypothetical protein Lcho_3028 3348183 - 3346780 - | amidohydrolase Lcho_3029 3348377 - 3348180 - | hypothetical protein Lcho_3030 3348583 - 3348374 - | hypothetical protein Lcho_3031 3350452 - 3348587 - | allophanate hydrolase TERM 1723 3349870 - 3349842 - G 72 -13 -3.5393 | overlap 3349843 ACCAGTTCGTTGAAA CCCGCCGGCACG CGACC CGAGCCGGCGGT GTCGGTGCCGAGCGC TERM 1724 3349869 - 3349843 - G 72 -16.5 -2.72144 | overlap 3349842 CCAGTTCGTTGAAAC CCGCCGGCACG CGACC CGAGCCGGCGG TGTCGGTGCCGAGCG Lcho_3032 3350774 - 3351856 + | putative sigma54 specific transcriptional regulator TERM 1725 3352105 - 3352069 - f 84 -17.3 -2.78463 | AGGCGCCCGATCACA GCGTGCGATGCAGGCCA TCC TGGCCTACCTGGCACGC CACCCAACGGCCGCT Lcho_3033 3352076 - 3352291 + | hypothetical protein Lcho_3034 3352339 - 3352938 + | hypothetical protein TERM 1726 3353408 - 3353369 - g 73 -13.5 -3.35996 | CAGCGTCACCCACAA CACCAGCGACGACGCGC TCGGCG GCGCGCTGCTGCTGGTG CGCCAGGGCAACCGC Lcho_3035 3352935 - 3353744 + | hypothetical protein Lcho_3036 3353799 - 3355589 + | tail sheath protein Lcho_3037 3355617 - 3356060 + | phage tail protein TERM 1727 3356778 - 3356825 + G 75 -13.3 -3.72576 | gap 2 CGCGCCGCGGCTCGA CAGCGC-CGGCTACG-CCGCCTG GATG CTGGCGGTCGGGGCCGCGCGCGG TTTCCTGGCACGGCG Lcho_3038 3356080 - 3357684 + | hypothetical protein Lcho_3039 3357681 - 3358163 + | phage tail protein Lcho_3040 3358165 - 3359139 + | hypothetical protein Lcho_3041 3359226 - 3359399 + | hypothetical protein TERM 1728 3359943 - 3359961 + G 74 -10.2 -4.07687 | overlap 3359944 CCGACCTCGGTTTTC TGCGCCGG CTG CTGGCGCG TTTTGACGCCGACCT Lcho_3042 3359423 - 3360508 + | hypothetical protein TERM 1729 3360683 - 3360723 + G 80 -6.1 -4.7254 | gap 2, overlap 3360683 ACGCGCCGCTGTGGG CGCG-CGTGGT-GGCGCCG TTCGC CGGTGACGACCGCGGCGTG TTTTTCCTGCCCGAT Lcho_3043 3360526 - 3361215 + | Rhs element Vgr protein TERM 1730 3362547 - 3362531 - g 73 -15.1 -3.14132 | GCGCCCTGGTACGAA GGCGGCG GCG CGCCGCC GGTGCAGATCCGCCT Lcho_3044 3361205 - 3362872 + | hypothetical protein Lcho_3045 3362869 - 3363261 + | GPW/gp25 family protein TERM 1731 3363454 - 3363468 + G 79 -7.8 -4.60487 | AACCTGATCCCCGAG CGCCAG CGG CTGGTG TTTTTGCAGCTGCTC TERM 1732 3364881 - 3364916 + G 75 -14 -3.53012 | gap 1, opp_overlap 3364879 GAGTTTCGAGACACC CGCGGTCG-ACGTCGGC CGG GTCGACGTGCTGCCGCG TTTCAAGCCGAGCGA Lcho_3046 3363265 - 3365547 + | hypothetical protein TERM 1733 3367078 - 3367094 + G 74 -7.9 -4.25104 | overlap 3367046 AGCTGGCCGCGCTGC GCGCCTG GGG CAGCCGC TTTTCGTACGCCGAG TERM 1734 3367291 - 3367330 + G 75 -15.8 -3.09516 | opp_overlap 3367287 TCGACATCGAACCCG GC-GCGCTGGCGCGGCTC ACGGTC GAGC-GCGCCGGCGCCGC TTGGCTGCTGCAGCA TERM 1735 3367914 - 3367948 + G 71 -8.5 -4.07687 | gap 1 CTGTTCAACGAGGCC GTGGCCAGTGCGCGCG AAGA CGC-CGCGGTGGTCGC TTTTCAAGAACGGCT Lcho_3047 3365547 - 3368396 + | phage tail protein Lcho_3048 3368412 - 3368726 + | hypothetical protein Lcho_3049 3368737 - 3369090 + | hypothetical protein TERM 1736 3369480 - 3369531 + G 76 -15.9 -3.15574 | gap 3, overlap 3369479 CGATTTGTTTCGCCG CGCCTGGCCGCCAGCGGCGCCACGCT GCC AGCGCG-CGCCG-TGGTGGCC-GACG TCTTCATCCGCTTCG Lcho_3050 3369087 - 3370016 + | hypothetical protein Lcho_3051 3370039 - 3371973 + | hypothetical protein TERM 1737 3372085 - 3372049 - g 70 -13 -3.41234 | gap 1 GAGCAAGCGAAGCAA CACTCCGATCACCCAGC CCTT GCCGGGCGAGCGG-GTG ATCGCGCTGTCACCG TERM 1738 3374028 - 3374085 + G 75 -13.4 -3.65902 | gap 3, overlap 3374031 GGACGCCGTTCGAGC CCACCGCCG-GCGTGCTGCCGGCAGTGCC CGC GGCCCTGCCGTC-G-ACGCTCGGCGGTCA TTTCGATGCGCTGGC TERM 1739 3374031 - 3374082 + G 84 -19.5 -2.94322 | gap 3, overlap 3374028 CGCCGTTCGAGCCCA CCGCCG-GCGTGCTGCCGGCAGTGCC CGC GGCCCTGCCGTC-G-ACGCTCGGCGG TCATTTCGATGCGCT Lcho_3052 3372032 - 3377014 + | hypothetical protein Lcho_3053 3377018 - 3378640 + | hypothetical protein Lcho_3054 3378637 - 3380814 + | ATPase central domain-containing protein Lcho_3055 3380811 - 3382415 + | OmpA/MotB domain-containing protein Lcho_3056 3382424 - 3382825 + | hypothetical protein Lcho_3057 3383230 - 3382868 - | hypothetical protein Lcho_3058 3385315 - 3383327 - | phospholipid/glycerol acyltransferase Lcho_3059 3386165 - 3385368 - | hypothetical protein Lcho_3060 3386645 - 3386181 - | hypothetical protein Lcho_3061 3387207 - 3386689 - | YiaAB two helix domain-containing protein TERM 1740 3386938 - 3386894 - G 76 -12.2 -3.78953 | opp_overlap 3386893 ATCGCCAGCATGAAA CCGC-CCCAGACCACGGCCGAC CAC ATCGGC-GTGGTCTCGCTGCGG GTCTGCTGCTGATCG Lcho_3062 3387348 - 3388085 + | helix-turn-helix domain-containing protein TERM 1741 3388137 - 3388119 - T 100 -17.4 -4.42238 | GGACGCCAATGAAAA CGCCCCGC AGT GCGGGGCG TCGAACCGTCAGATC TERM 1742 3388187 - 3388215 + T 72 -8.7 -4.10161 | GACCCGATCAGTAGG CCTGGCCGAGCTG GTC CAGGATGGCCGGG TTTTCCAGAGTGCTG Lcho_3063 3390155 - 3388179 - | acetate--CoA ligase TERM 1743 3390196 - 3390221 + H 72 -3.1 -4.61231 | opp_overlap 3390194 3390196, overlap 3390198 ATGCCACGGACAATA GGCACAGGCTC TTAC GAGCCCCTGAC TTTTTCACGGTCTGC Lcho_3064 3390383 - 3390976 + | hypothetical protein Lcho_3065 3391075 - 3392601 + | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit Lcho_3066 3393961 - 3392603 - | MscS mechanosensitive ion channel TERM 1744 3393129 - 3393105 - G 75 -14.3 -3.53091 | ATGCGGCCCTCGAAA TCGGCCACCTG CAC CAGGTCGCCGA TGCGCAGCGAGCGCT Lcho_3067 3394000 - 3394770 + | pseudouridine synthase TERM 1745 3394810 - 3394783 - T 100 -14 -5.26316 | opp_overlap 3394782 3394779, overlap 3394784 TGAGCGGACAAAAAA GCGCCCCCCGGC TTGC GGCGGGGGGCGA ATGCTCTGATGCGCC TERM 1746 3394809 - 3394784 - T 93 -17.5 -3.75067 | opp_overlap 3394782 3394779, overlap 3394783 GAGCGGACAAAAAAG CGCCCCCCGGC TTGC GGCGGGGGGCG AATGCTCTGATGCGC Lcho_3068 3395990 - 3394959 - | NAD-dependent epimerase/dehydratase TERM 1747 3395926 - 3395914 - G 73 -10.5 -3.74693 | overlap 3395915 TGCGAGCCGATGAAA CCGGC GCT GCCGG TCACCAGCCAGCGGC Lcho_3069 3397270 - 3395990 - | nucleotide sugar dehydrogenase Lcho_3070 3398591 - 3397431 - | cellulose biosynthesis protein CelD TERM 1748 3397489 - 3397526 + g 72 -5.3 -4.36127 | gap 1 GGACCAGGGTTCTTG CGTGCCTGCGCCTGCCCG AGT CGAGCTGCC-CGGGCCCG TTTTGCCTTGTTCAA Lcho_3071 3399926 - 3398745 - | protein involved in cellulose biosynthesis (CelD)-like protein Lcho_3072 3401108 - 3400053 - | acyltransferase 3 Lcho_3073 3401631 - 3403106 + | polysaccharide biosynthesis protein Lcho_3074 3403152 - 3404117 + | polysaccharide deacetylase Lcho_3075 3404130 - 3405254 + | glycosyl transferase family protein Lcho_3076 3405272 - 3406048 + | polysaccharide deacetylase Lcho_3077 3406017 - 3407531 + | O-antigen polymerase TERM 1749 3409032 - 3409009 - g 95 -13.8 -4.36914 | overlap 3409010 3409012 CCTGTGGCGAGAAAA CCAGGCCCGG CAAG CCGGGCCTGC CGAGCCGCCGGCTCA TERM 1750 3409031 - 3409010 - g 80 -17.3 -3.21934 | overlap 3409009 3409012 CTGTGGCGAGAAAAC CAGGCCCGG CAAG CCGGGCCTG CCGAGCCGCCGGCTC TERM 1751 3409038 - 3409012 - g 82 -18 -3.1733 | overlap 3409010 3409009 GTGGCGAGAAAACCA GGCCCGGCAAGC CGG GCCTGCCGAGCC GCCGGCTCAGGTGAC Lcho_3078 3407558 - 3409060 + | O-antigen polymerase Lcho_3079 3410055 - 3409045 - | NAD-dependent epimerase/dehydratase Lcho_3080 3411199 - 3410081 - | glycosyl transferase group 1 TERM 1752 3410463 - 3410436 - G 72 -3.3 -4.59773 | gap 1, overlap 3410437 GTCCAGCCCGAAAAA CGCA-CGCCGGC GCCGA GCTGGTGCTGCG CCACATAGGCCTCGA Lcho_3081 3412265 - 3411255 - | hypothetical protein Lcho_3082 3413410 - 3412340 - | hypothetical protein Lcho_3083 3413494 - 3413652 + | hypothetical protein Lcho_3084 3414924 - 3413785 - | glycosyl transferase group 1 TERM 1753 3414591 - 3414631 + g 73 -14 -3.31461 | opp_overlap 3414582 TGAAGAGCGTCGGCA CGCCCGCCAGCCACGCG-GC CAG GCGCGCGTAGCTGTCGG-CG TTGTAGAGATGGGTG Lcho_3085 3415151 - 3416380 + | glycosyl transferase group 1 Lcho_3086 3416377 - 3417144 + | hypothetical protein TERM 1754 3417240 - 3417224 - f 91 -6.5 -5.0133 | opp_overlap 3417223 CACGGCTTCAAAAAA GGAGCAT CAC ATGCACC GATTTCCACGTACCT Lcho_3087 3417234 - 3418535 + | hypothetical protein TERM 1755 3418579 - 3418545 - T 100 -23.7 -3.1082 | gap 1, opp_overlap 3418545, overlap 3418532 3418547 CACTGACCCAAGACA GACCGGGTGGTCCCGC GCCA GCGGG-CCACCCGGTC TTTTTCATCGGCCCG TERM 1756 3418545 - 3418579 + T 100 -23.7 -4.72272 | gap 1, opp_overlap 3418545 3418532 3418547 CACTGACCCAAGACA GACCGGGTGGTCCCGC GCCA GCGGG-CCACCCGGTC TTTTTCATCGGCCCG TERM 1757 3418577 - 3418547 - T 100 -20.5 -3.11072 | gap 1, opp_overlap 3418545, overlap 3418545 3418532 CTGACCCAAGACAGA CCGGGTGGTCCCGC GCCA GCGGG-CCACCCGG TCTTTTTCATCGGCC Lcho_3088 3419697 - 3418627 - | hypothetical protein Lcho_3089 3421598 - 3420762 - | LytTR family two component transcriptional regulator Lcho_3090 3422650 - 3421601 - | histidine kinase internal region Lcho_3091 3422735 - 3424165 + | argininosuccinate lyase TERM 1758 3424162 - 3424220 + F 100 -23.9 -2.94099 | opp_overlap 3424151, overlap 3424164 3424206 CCAAGCCCGCCTCGG CTGACGCAGGC-GCGCGGGCCGTGGCGCA CCG TGCGCC-CGGCCCGCGCCGCATGGATCGG TGTCTGATCGCCGGG TERM 1759 3424243 - 3424268 + F 82 -4 -5.055 | gap 1, overlap 3424206 3424242 TCGCCGGGCGCACAG CGC-AGAACCG ACCGG CGTTTCTCGCG TTTTTTCGGGCTTCG TERM 1760 3424891 - 3424851 - g 75 -13.2 -3.67597 | gap 1, opp_overlap 3424884, overlap 3424852 GCGCTGACCGAAGAA CCCGGCCGCGGCCAGGCCC TGCT GAGCCTGGGCGCGG-CGCA CAGCGCGCTGGTGAT Lcho_3092 3424335 - 3425258 + | hypothetical protein Lcho_3093 3425272 - 3425916 + | fimbrial assembly family protein Lcho_3094 3425913 - 3426578 + | MshA biogenesis protein, MshJ-like protein TERM 1761 3426604 - 3426628 + G 70 -12.8 -3.38522 | overlap 3426608 CGTCTCATGGATGGC GGCACAGGCG CTGAT CGCCTGCGCC TGTTTCGCCTGGATC TERM 1762 3426720 - 3426667 - g 91 -18.7 -3.31263 | gap 1, overlap 3426669 AGCGCAGGCGCAGAA CAGCCCGGCCG-CGGGCCGCACCGGC ATC GCCGATCCGACCCGTCCGCCGGCCGG CCTGGGTGGTGCCCC TERM 1763 3426718 - 3426669 - g 87 -19.9 -3.22475 | gap 1, overlap 3426667 CGCAGGCGCAGAACA GCCCGGCCG-CGGGCCGCACCGGC ATC GCCGATCCGACCCGTCCGCCGGCC GGCCTGGGTGGTGCC Lcho_3095 3426575 - 3427135 + | hypothetical protein Lcho_3096 3427135 - 3428868 + | pilus (MSHA type) biogenesis protein MshL TERM 1764 3429426 - 3429465 + G 74 -7.7 -4.28254 | opp_overlap 3429444, overlap 3429426 3429437 TCTGCTCGGCATGGC CAGCAGCAGCGCCGAAG ACGCGC CGGTGGTGCGGCTGCTG TTTTCGGTGTTCGAA TERM 1765 3429701 - 3429654 - g 80 -11.8 -4.10657 | gap 1, opp_overlap 3429654 3429658 GGACATCTCCGAAAA GCGCCTGC-CGCAGGACGGCCGC TTT GCCGTCAACCTGCGCACCGGCGC GGTCGACGTGCGGAT Lcho_3097 3428878 - 3430614 + | type II secretion system protein E TERM 1766 3431056 - 3431027 - g 74 -4.2 -4.47259 | gap 1, overlap 3431028 3431031 ACGAGAAGATGAAAA GCACGCTG-GCCG AGGTG CGGCACAGCCTGG AGTCGGGCATCGCGC Lcho_3098 3430705 - 3431943 + | type II secretion system protein TERM 1767 3432033 - 3432009 - g 75 -10.7 -4.01888 | ACCTCAGATGACAAA GGTGTTCCTGC TCT GCAAGAACGCC GACAGCCCGCACCGC Lcho_3099 3431959 - 3432117 + | hypothetical protein Lcho_3100 3432135 - 3432545 + | hypothetical protein TERM 1768 3432616 - 3432671 + G 75 -13.3 -3.67296 | gap 2, opp_overlap 3432624, overlap 3432624 CCACTCCCGTCAACC TCCACACAGGCGCAACCGCC-C-CCGC AACC GCGGCGTGGCTGTTGCGCCTTTGCGCA TTTGCGTGGCTGCTA TERM 1769 3432663 - 3432624 - g 73 -16.5 -2.89742 | gap 2, opp_overlap 3432616 3432624 GTCAACCTCCACACA GGCGCAACCGCC-C-CCGC AACC GCGGCGTGGCTGTTGCGCC TTTGCGCATTTGCGT TERM 1770 3432624 - 3432663 + G 87 -16.5 -3.64236 | gap 2, opp_overlap 3432624, overlap 3432616 GTCAACCTCCACACA GGCGCAACCGCC-C-CCGC AACC GCGGCGTGGCTGTTGCGCC TTTGCGCATTTGCGT Lcho_3101 3432597 - 3435998 + | hypothetical protein Lcho_3102 3435998 - 3436471 + | hypothetical protein Lcho_3103 3436461 - 3436934 + | hypothetical protein Lcho_3104 3436924 - 3437817 + | hypothetical protein Lcho_3105 3437814 - 3438263 + | MSHA biogenesis protein MshP Lcho_3106 3438713 - 3440533 + | methanol/ethanol family PQQ-dependent dehydrogenase Lcho_3107 3440678 - 3441061 + | hypothetical protein TERM 1771 3441271 - 3441243 - g 79 -16 -3.29144 | overlap 3441204 3441244 CGAGGGCCTGGAGAA CCGCCTGGCCGA GCTGT TCGGCCAGGCGC TGGGCCTGCCCGTCA TERM 1772 3441270 - 3441244 - g 82 -19.5 -2.57344 | overlap 3441204 3441243 GAGGGCCTGGAGAAC CGCCTGGCCGA GCTGT TCGGCCAGGCG CTGGGCCTGCCCGTC Lcho_3108 3441058 - 3441939 + | extracellular solute-binding protein Lcho_3109 3441956 - 3442687 + | hypothetical protein Lcho_3110 3442704 - 3443069 + | hypothetical protein TERM 1773 3443309 - 3443329 + G 70 -13.9 -3.16191 | GTGCTGGGCGCACCG GGCCGGGCC AGC GACCCGGCC TTCGTGCCGATCTCG Lcho_3111 3443114 - 3443947 + | sulphur oxidation protein SoxZ Lcho_3112 3444528 - 3443959 - | hypothetical protein Lcho_3113 3444712 - 3445644 + | YVTN beta-propeller repeat-containing protein Lcho_3114 3445641 - 3446177 + | MxaD protein TERM 1774 3446427 - 3446439 + G 73 -10.5 -3.78775 | ACACGCTCGGCCGCA CCGGC AAC GCCGG TTTCATCGTCGGCGC Lcho_3115 3446180 - 3447235 + | hypothetical protein Lcho_3116 3447225 - 3448088 + | hypothetical protein Lcho_3117 3448085 - 3448609 + | hypothetical protein Lcho_3118 3449663 - 3448635 - | arsenical-resistance protein Lcho_3119 3450243 - 3449737 - | protein tyrosine phosphatase Lcho_3120 3450782 - 3450261 - | glyoxalase/bleomycin resistance protein/dioxygenase Lcho_3121 3451122 - 3450796 - | ArsR family transcriptional regulator Lcho_3122 3451563 - 3451198 - | hypothetical protein TERM 1775 3451679 - 3451703 + r 100 -17.2 -4.4009 | GCGGCCTGTCTTTCA GCCCTTCGCG CCCCT CGCGAAGGGC TTTTCTGCCCTCACA Lcho_3123 3452796 - 3451714 - | transposase IS4 family protein TERM 1776 3452910 - 3452881 - R 76 -9.3 -4.11484 | gap 1 CCCAACGTTTGAAAA TTCACCG-ACCGCC AAA GGCGATCCGGTGGA ATGATGGGTTGGGCT Lcho_3124 3453519 - 3452926 - | hypothetical protein Lcho_3125 3453996 - 3453526 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding Lcho_3126 3454378 - 3454040 - | hypothetical protein TERM 1777 3454167 - 3454194 + g 74 -2.6 -4.68209 | opp_overlap 3454174 AAGTCACCAAGAATC GCCAATACATCG CGGC CGCTGAATTCGC TTTCTTTATTGACGT Lcho_3127 3454607 - 3455107 + | hypothetical protein Lcho_3128 3456350 - 3455538 - | response regulator receiver protein TERM 1778 3455611 - 3455624 + g 74 -2.3 -4.74611 | overlap 3455612 GTTGAGCCGTTGGCG CCTCG TTCA CGAGC TTCTTTTTTGTGCTC TERM 1779 3456277 - 3456293 + g 80 -6.5 -4.68593 | CTTTTGGTAAACCCC TTAGCCG ATT CGGCGAA TTTTTCCGTACTCAC TERM 1780 3456716 - 3456685 - H 100 -2.2 -6.02546 | gap 1, overlap 3456696 GCAAACCAAAAAAAA TGTGCATGCAAGGTC CGC GGCCT-GCATGAGCA ACCTGCATGCGGTGT Lcho_3129 3457037 - 3457528 + | transposase IS3/IS911 family protein Lcho_3130 3457525 - 3458568 + | integrase catalytic region Lcho_3131 3459308 - 3458631 - | HAD family hydrolase Lcho_3132 3459862 - 3459317 - | formaldehyde-activating enzyme Lcho_3133 3460751 - 3459906 - | formylmethanofuran dehydrogenase subunit C Lcho_3134 3461695 - 3460748 - | formylmethanofuran--tetrahydromethanopterin N-formyltransferase TERM 1781 3461742 - 3461714 - R 75 -12.4 -3.53224 | gap 1, overlap 3461717 GACGCTCCCTGGAAA CAC-GCGGTCGGC AGCA GCCGGCCGCCGTG GCAGCACTCGCACAG Lcho_3135 3463377 - 3461692 - | formylmethanofuran dehydrogenase subunit A Lcho_3136 3464675 - 3463374 - | formylmethanofuran dehydrogenase Lcho_3137 3465723 - 3464965 - | histidine biosynthesis protein Lcho_3138 3465778 - 3466809 + | hypothetical protein Lcho_3139 3466796 - 3467947 + | H4MPT-linked C1 transfer pathway protein Lcho_3140 3467947 - 3468540 + | aspartate/glutamate/uridylate kinase Lcho_3141 3469345 - 3468587 - | hypothetical protein TERM 1782 3468834 - 3468780 - G 76 -11.8 -3.72695 | opp_overlap 3468803, overlap 3468818 ACCTGCGCGATCAAA CCGGCCAGCTCGACGGCACCCAGGCG CTG CAACAAGGAGCCGCCGCGCTTGTCGG CGGTGTCGAGCATCA TERM 1783 3468870 - 3468860 - G 88 -4.6 -5.06451 | CATCACGGCAAAAAA GCGC TGG GCAC AGACACGCTGCAGCA Lcho_3142 3469932 - 3469345 - | hypothetical protein Lcho_3143 3471344 - 3469929 - | dihydropteroate synthase DHPS Lcho_3144 3471763 - 3471323 - | DNA/pantothenate metabolism flavolike protein TERM 1784 3471898 - 3471870 - R 86 -10.1 -4.21462 | AGGCACCAGGCAAAA CGCGAGCGCGCCG CGG CGTCGGGCTCCCG GACCGTGACGTCAGT Lcho_3145 3474026 - 3471909 - | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 1785 3473996 - 3473984 - G 77 -4.8 -4.63527 | overlap 3473986 GCACCACGTCAAAAA CACG TTCGG CGTG CCGCCCGGTTCCAAG Lcho_3146 3474294 - 3474824 + | dihydroneopterin aldolase TERM 1786 3474862 - 3474834 - T 100 -27.5 -3.06261 | overlap 3474836 CGGTAACGCGCAAGA CACCGCGCGGGCC ATC GGCCCGCGCGGTG AACTCGACGTCAGCG TERM 1787 3474860 - 3474836 - T 100 -24.3 -3.08867 | overlap 3474834 GTAACGCGCAAGACA CCGCGCGGGCC ATC GGCCCGCGCGG TGAACTCGACGTCAG Lcho_3147 3475395 - 3474886 - | formaldehyde-activating enzyme TERM 1788 3475494 - 3475482 - R 70 -6.2 -4.25104 | CTGCCGGTACGAAAA CCGG CCACC CCGG GAGCAATAAACACGT TERM 1789 3475515 - 3475505 - R 72 -6.8 -4.24342 | CCCGGGAGCAATAAA CACG TTC CGTG CCACCTCGGCCGTCA Lcho_3148 3476443 - 3475547 - | triphosphoribosyl-dephospho-CoA protein TERM 1790 3476460 - 3476402 - G 93 -22.3 -3.14564 | gap 1, opp_overlap 3476459 GCAGGCGTTCAGGAA GGCCTGGCGGGCG-GGCGCGCTGGCGTC GGTG GAGACCGGCACGTCACGCCCGCCGGGCC GGCGCAGCGACGGGC Lcho_3149 3477443 - 3476445 - | alpha-L-glutamate ligase Lcho_3150 3478452 - 3477448 - | methenyltetrahydromethanopterin cyclohydrolase TERM 1791 3478079 - 3478106 + g 70 -4.8 -4.34737 | gap 1, opp_overlap 3478042 3478043, overlap 3478075 CGTGCCGGGCCGGAG CCGAGCGAGAAGA ACT TCTTGCCGC-CGG TTTCTTCCTTGCTGG Lcho_3151 3479696 - 3478449 - | hypothetical protein Lcho_3152 3480604 - 3479693 - | methylenetetrahydrofolate dehydrogenase (NADP(+)) Lcho_3153 3481737 - 3480610 - | beta-ribofuranosylaminobenzene 5'-phosphate synthase TERM 1792 3481040 - 3481022 - G 80 -11.6 -4.14739 | opp_overlap 3481030 GCAGCCACCGCAAAA CCGGCGCC CGC GGTGCCGG GCAGCACGCGCATCA Lcho_3154 3481989 - 3482585 + | GCN5-related N-acetyltransferase Lcho_3155 3482695 - 3483549 + | ATPase TERM 1793 3483597 - 3483581 - g 70 -10.1 -3.75766 | opp_overlap 3483588 TGCACAACTGAAGAA CGCCCTC GCC GAAGGCG TGGTGGACGCACTCG Lcho_3156 3483561 - 3483842 + | hypothetical protein Lcho_3157 3483839 - 3484423 + | GCN5-related N-acetyltransferase TERM 1794 3486329 - 3486293 - g 76 -15.7 -3.21276 | opp_overlap 3486297, overlap 3486291 TGGCCTTCTACAACA CGCTGCAGGCGCGTGGC ATC GCCTCACGCCTGCTGTG GTTCCCGGACGAGAA TERM 1795 3486297 - 3486325 + G 73 -15.9 -2.90075 | opp_overlap 3486293 3486291 CTTCTACAACACGCT GCAGGCGCGTGGC ATC GCCTCACGCCTGC TGTGGTTCCCGGACG Lcho_3158 3484435 - 3486441 + | peptidase S9 prolyl oligopeptidase Lcho_3159 3487441 - 3486419 - | poly (3-hydroxybutyrate) depolymerase Lcho_3160 3487682 - 3488863 + | hypothetical protein Lcho_3161 3488860 - 3490800 + | surface antigen (D15) TERM 1796 3490984 - 3491017 + G 79 -7.3 -4.56597 | gap 1, overlap 3491002 3491003 GCATCGGCCTGGAGG TC-CAGGCCAGCCGCG GCG CGCTGCTGGGCGGCGA TTTTTCGGCGCAGCG TERM 1797 3492105 - 3492136 + G 100 -24.4 -3.53091 | CTGAGCCAGCCGCTG CCGGCGGCCGGCGC CGCT GCCCCGGCCGCCGG TTTCGAGACCCGCCT TERM 1798 3494420 - 3494393 - g 87 -19.8 -3.02144 | GCAGCGCCCCGAAGA CGCGGCCGCGCG CGAA CGCGCCGCCGCG GCTGCGCGCAGCCAG Lcho_3162 3490803 - 3495164 + | hypothetical protein TERM 1799 3495305 - 3495331 + F 100 -8.7 -5.4505 | gap 1 GTCGACGTCCATCAG GCCCGC-CTCTT CCCT ATGAGAGCGGGC TTTTTTCTTCCACCG Lcho_3163 3495456 - 3496745 + | integrase family protein TERM 1800 3497987 - 3497957 - f 79 -6.8 -4.4767 | gap 1, opp_overlap 3497957, overlap 3497958 TGAGCCACCAGAAAA GCC-GGTGCGACA ATGAAG CGTCGCGCCAGGC TGTGATTGATCCCCA Lcho_3164 3498201 - 3498656 + | hypothetical protein TERM 1801 3498820 - 3498801 - f 78 -12.8 -3.55444 | CCGGTAGCCTGGAAA CGGCCCGG CCCC CCGGACCG GCCGAACCGCCGATT Lcho_3165 3499024 - 3499323 + | transposase IS3/IS911 family protein Lcho_3166 3499320 - 3500207 + | integrase catalytic region Lcho_3168 3500629 - 3501099 + | HK97 family phage protein Lcho_3169 3501147 - 3501449 + | hypothetical protein TERM 1802 3501634 - 3501649 + F 75 -3.2 -4.81083 | opp_overlap 3501634 3501635 CAAGGGGTCGGCAAA CCGC AGAACGGG GCGG TTTTTCCTGATTCCG TERM 1803 3501721 - 3501692 - f 81 -12.2 -3.85817 | opp_overlap 3501682, overlap 3501693 ACTTCCCTGGACAAA GTGTTCCCGGTG TTCCCG CACCGGGAACAG CCAGTGGGAACATAA TERM 1804 3501720 - 3501693 - f 80 -15.7 -2.91276 | opp_overlap 3501682, overlap 3501692 CTTCCCTGGACAAAG TGTTCCCGGTG TTCCCG CACCGGGAACA GCCAGTGGGAACATA TERM 1805 3501848 - 3501833 - f 72 -8.2 -4.08394 | AGAGCGCGCCGAAAA CCGCAC CGAT GCGCGG CCGCCAGGCGCCAAT Lcho_3170 3502013 - 3502615 + | resolvase domain-containing protein Lcho_3171 3502655 - 3502990 + | RelE-like cytotoxic translational repressor of toxin-antitoxin stability system TERM 1806 3503149 - 3503159 + G 81 -8.2 -4.52589 | overlap 3503107 3503106 AAGCCCAGTTCGCGG CCCG CTT CGGG TTTTCTGTGGCGACG Lcho_3172 3502995 - 3503279 + | XRE family transcriptional regulator TERM 1807 3503455 - 3503481 + F 100 -10.8 -5.4505 | GCCGACGTCCATCAG GCCCGCCCTC TCCCTAT GAGCGCGGGC TTTTTTCTTCCGGCG Lcho_3173 3503641 - 3505731 + | diguanylate cyclase with PAS/PAC sensor Lcho_3174 3505949 - 3509212 + | GAF sensor hybrid histidine kinase Lcho_3175 3510175 - 3509246 - | LysR family transcriptional regulator Lcho_3176 3510295 - 3511371 + | tartrate dehydrogenase TERM 1808 3512294 - 3512318 + G 71 -9.1 -4.07885 | opp_overlap 3512276, overlap 3512277 3512302 TGGCCGGCATCGCGC GGCAGGTGGCG CGC CGCGGCCAGCC TTTTCAGGGCCCGTG Lcho_3177 3511408 - 3512694 + | hydroxypyruvate reductase Lcho_3178 3512796 - 3513782 + | hypothetical protein Lcho_3179 3514919 - 3513822 - | heat shock protein DnaJ domain-containing protein TERM 1809 3514677 - 3514725 + g 71 -14.5 -3.05384 | gap 2, overlap 3514702 3514718 ACGGGATCGGGCGGC GGCAGCAGGCGCCTGGGCCGTGT CGCCA GCGCCGCCC-GGCGCC-GCGGCC TTGCGTGCGCCGGCC TERM 1810 3516633 - 3516617 - g 70 -13.7 -3.14132 | GCGCTGGTCGAGGAA TCGGCCG CGG CGGCCGA GTCGCTGGCCAGCCA Lcho_3180 3515150 - 3516718 + | methyl-accepting chemotaxis sensory transducer Lcho_3181 3517471 - 3516743 - | short-chain dehydrogenase/reductase SDR Lcho_3182 3518468 - 3517521 - | AraC family transcriptional regulator Lcho_3184 3519450 - 3520481 + | peptidase C14 caspase catalytic subunit p20 TERM 1811 3521053 - 3521014 - g 76 -17.1 -2.72344 | CGCCAGCGCGAACGA CGCGGCCAGCCTGCTCG TGATCC CGAGCGAGCCGACCGCG GCCGGCCGGCCGCTG TERM 1812 3521105 - 3521163 + G 81 -12.4 -3.92324 | gap 4, overlap 3521105 3521113 CTCGACATCGTGCAC GC-GGCGGCGGCGGCCGAGCGCGCCGCGCT GGC AGCCCAGCG-GC-CGG-CGCCGTCGCCGGA TTTCCTGTTCGCCGA TERM 1813 3521105 - 3521162 + G 80 -18.4 -2.95073 | gap 3, overlap 3521105 3521113 CTCGACATCGTGCAC GCGGCGGCGGCGGCCGAGCGCGCCGCGCT GGC AGCCCAGCG-GC-CGG-CGCCGTCGCCGG ATTTCCTGTTCGCCG Lcho_3185 3520499 - 3521908 + | TPR repeat-containing protein TERM 1814 3523775 - 3523758 - g 75 -12.7 -3.68529 | overlap 3523759 3523761 AGGTGATCACCGAAA CCACCGG CGCG CCGGTGG CGCTGCGGGTGCTGC Lcho_3186 3521948 - 3523882 + | hypothetical protein Lcho_3187 3523963 - 3525987 + | TPR repeat-containing protein Lcho_3188 3526060 - 3527088 + | hypothetical protein Lcho_3189 3527109 - 3527741 + | hypothetical protein TERM 1815 3528534 - 3528491 - g 76 -7.2 -4.4009 | GCCCAGGCGACAAAA CTCGACGCCGGCGCCCGC GTGCTGCT GCTGGTGCCCGAGCCGAG CTGGATCGACGAGGG TERM 1816 3529494 - 3529507 + G 79 -8.1 -4.59773 | CGGCCCAGTCGCTCG GCAGC CACC GCTGC TTTTTGCGCATGCGG Lcho_3190 3527738 - 3529723 + | hypothetical protein Lcho_3191 3529754 - 3531355 + | cholesterol oxidase TERM 1817 3533616 - 3533571 - g 74 -8.1 -4.18494 | gap 1, overlap 3533572 CAGCGGCAGGCAAAA CCGACGAGGGCGACGA-GGGCG ACG CCCCGACCGCCGCCACCGTCGA GCGCCTGAGCCTGCT Lcho_3192 3531359 - 3534160 + | hypothetical protein Lcho_3193 3535031 - 3534225 - | short-chain dehydrogenase/reductase SDR TERM 1818 3535067 - 3535054 - H 93 -5.2 -5.26119 | overlap 3535055 3535056 CCTGGAAAAAGAAAA CGCG GATGGG CGCG CAGCTTAAGGCAGCG Lcho_3194 3535193 - 3536122 + | alpha/beta hydrolase fold TERM 1819 3537758 - 3537709 - g 82 -18 -3.17075 | gap 3 GCTGGCCGAACTGAA GATCGACCTGCGCGCGCTG-CGCCG CAA CGCCGGCAGCGCGCGCAG--CGACC GCGGCGCCGCGGTAC Lcho_3195 3536171 - 3537973 + | diguanylate cyclase/phosphodiesterase Lcho_3196 3538004 - 3538675 + | N-(5'phosphoribosyl)anthranilate isomerase (PRAI) Lcho_3197 3539654 - 3538677 - | AraC family transcriptional regulator Lcho_3198 3540927 - 3539683 - | monosaccharide-transporting ATPase Lcho_3199 3542452 - 3540929 - | ABC transporter-related protein TERM 1820 3542253 - 3542240 - G 70 -9.5 -3.74693 | GTGGATGCCACGAAA GCGCC GCTC GGCGC CCTGGTAACGGATCT TERM 1821 3542518 - 3542493 - R 95 -14.7 -4.13945 | AGGTGGATGGGAAAA GGTCCCGCGCC TGTC GACACGGGACC CGGCCCAACCCGGTC Lcho_3200 3543601 - 3542537 - | sugar ABC transporter, periplasmic sugar-binding protein Lcho_3201 3544251 - 3545945 + | L-ribulokinase Lcho_3202 3545942 - 3546676 + | L-ribulose-5-phosphate 4-epimerase Lcho_3203 3546713 - 3548206 + | L-arabinose isomerase Lcho_3204 3549480 - 3548527 - | AraC family transcriptional regulator TERM 1822 3549343 - 3549287 - G 75 -13.4 -3.60792 | gap 1, opp_overlap 3549292, overlap 3549288 GGCGCAAGGTGGAAA TGGCCCTCGCCGCGCGC-CACCCCGGC CGGC GCCGGGCGGTGCAGGCGGCGCGTGCCT TGCGCCAGGCCCTCG TERM 1823 3549342 - 3549288 - G 76 -16.9 -2.76261 | gap 1, opp_overlap 3549292, overlap 3549287 GCGCAAGGTGGAAAT GGCCCTCGCCGCGCGC-CACCCCGGC CGGC GCCGGGCGGTGCAGGCGGCGCGTGCC TTGCGCCAGGCCCTC TERM 1824 3550338 - 3550287 - g 79 -13.1 -3.85864 | gap 3, overlap 3550288 CTACCACGACAAGAA CGTGCA-GCGCGTGCTGGCCAAC-GC CGT GCAGTGGGCCAACCCGCGCGTGCA-G ATCGTCGACGTCTGC Lcho_3205 3549637 - 3550440 + | hypothetical protein Lcho_3206 3550440 - 3551549 + | oxidoreductase domain-containing protein TERM 1825 3551708 - 3551661 - g 77 -14.6 -3.55444 | opp_overlap 3551690 3551691, overlap 3551662 CCGTCACGCTCGAAA GCCTGCCGGCCCACGCCCAGCG AGAG CGCCACGCGCGGGCCCGCTGGG CCACGCGCGCCTTGT TERM 1826 3551707 - 3551662 - g 79 -18.1 -2.73124 | opp_overlap 3551690 3551691, overlap 3551661 CGTCACGCTCGAAAG CCTGCCGGCCCACGCCCAGCG AGAG CGCCACGCGCGGGCCCGCTGG GCCACGCGCGCCTTG Lcho_3207 3551612 - 3552817 + | major facilitator transporter Lcho_3208 3553646 - 3552861 - | ABC transporter-related protein Lcho_3209 3554286 - 3553636 - | polar amino acid ABC transporter, inner membrane subunit Lcho_3210 3555054 - 3554377 - | polar amino acid ABC transporter, inner membrane subunit Lcho_3211 3555879 - 3555088 - | extracellular solute-binding protein Lcho_3212 3556092 - 3557474 + | coenzyme F390 synthetase-like protein TERM 1827 3557538 - 3557496 - T 84 -13.2 -3.76373 | TGTCGAACACGTAAA GCCCCGGCGCCGCTCCGAGC GAG GGTGCGAGCGGCGGCGGCGC CTCCGGCGTCGACGA Lcho_3213 3559293 - 3557476 - | poly-beta-hydroxybutyrate polymerase domain-containing protein TERM 1828 3558114 - 3558128 + g 76 -11.4 -3.76224 | CCATCTGGTTCTCGA GCCAGG CCA CCTGGC TTTCGTCGATGAACA TERM 1829 3558416 - 3558472 + g 72 -16 -2.80016 | gap 2, opp_overlap 3558399 3558434 GTGAACACGGTGTAG C--CGTGCTCGACCAGGAAACGCACCAT CGA GTTGTGCGGTTCCAGGTCGAGCACGTAG TACTTCATGATCCAG TERM 1830 3560114 - 3560088 - g 75 -16.6 -2.62184 | TGGGTGGCCAGACCA TCGGCGTGGTCG GCG CCACCACGCCGA CGCTGCCCAGCATCA TERM 1831 3560753 - 3560731 - g 72 -12 -3.59233 | overlap 3560727 CAACCAGGAAACCAA CCTCGGCAAT CTC ACCGCCGAGG CCAACCTGGCACTGG Lcho_3214 3559490 - 3561496 + | 5'-nucleotidase domain-containing protein TERM 1832 3561555 - 3561580 + T 100 -21.9 -3.33696 | opp_overlap 3561555, overlap 3561577 ACGGGCAATGGAAAA GGGCCGGCAGC CTTG GCTGCCGGCCC TTCGTTCAGGCGGGG TERM 1833 3561580 - 3561555 - T 100 -21.9 -4.27584 | opp_overlap 3561555 3561577 ACGGGCAATGGAAAA GGGCCGGCAGC CTTG GCTGCCGGCCC TTCGTTCAGGCGGGG Lcho_3215 3563336 - 3561606 - | hypothetical protein Lcho_3216 3565164 - 3563425 - | methyl-accepting chemotaxis sensory transducer Lcho_3217 3567792 - 3565327 - | Alpha-glucosidase TERM 1834 3567127 - 3567117 - G 70 -4.6 -4.36914 | GGGTGTCGTAGAAAA GGCC GTA GACC AGGCCGCTGGCGGGC Lcho_3218 3569097 - 3567793 - | TRAP dicarboxylate transporter, DctM subunit TERM 1835 3568424 - 3568380 - G 85 -19.3 -3.01712 | CGGTCGCGGTGAACA CGCCGGCGACGATGCCGCCCA TGA TGATCAGCACCATCGCCAGCG CCGGCAGCGCACGCC Lcho_3219 3569624 - 3569094 - | tripartite ATP-independent periplasmic transporter DctQ Lcho_3220 3570617 - 3569643 - | TRAP dicarboxylate transporter, DctP subunit Lcho_3221 3572375 - 3570780 - | FAD dependent oxidoreductase TERM 1836 3572111 - 3572080 - G 85 -14.5 -3.78775 | gap 1 TGCGGCATCACGAAA CGCAGCG-GCCGCA TGATG TGCGGCGCACTGCG CAGCAGCGCCTCGCG Lcho_3222 3572502 - 3573275 + | DeoR family transcriptional regulator TERM 1837 3574008 - 3574055 + G 87 -19.8 -3.01791 | gap 1, opp_overlap 3574050, overlap 3574012 ATGCCGGCCTGCTCG GCGCGGCCTTGCCGATCGCCGGC ATC GCCGGCGACCAGCAGAG-CGCGC TGTTCGGCCAGGCCT Lcho_3223 3573317 - 3574810 + | glycerol kinase TERM 1838 3574979 - 3574934 - f 89 -18.3 -3.05384 | gap 1 CCGTCCGGCAGGCAA TCCGTCGCGGTGGCACGCATCG ACC CG-TGCGTGCGACCGCGACGCT CCAACCAAGGAAACA Lcho_3224 3575000 - 3576253 + | sodium/hydrogen exchanger Lcho_3225 3576250 - 3577374 + | glutamate--cysteine ligase GCS2 Lcho_3226 3577344 - 3578201 + | peptidase C26 TERM 1839 3578544 - 3578492 - g 85 -15.5 -3.86897 | gap 1, opp_overlap 3578495 GCCACCCGCGAGAAA GTGCTCGCCGCCGCACGCGAGCTC GGCTAT GAGC-CACATGCGGCGGCGCGTTC ACTGGCGGGCGGCTC TERM 1840 3578495 - 3578541 + G 75 -16.5 -3.05384 | gap 1, opp_overlap 3578492 ACCCGCGAGAAAGTG CTCGCCGCCGCACGCGAGCTCG GCTA TGAGC-CACATGCGGCGGCGCG TTCACTGGCGGGCGG TERM 1841 3579447 - 3579390 - g 75 -17.1 -2.59564 | gap 3, overlap 3579389 TGGTGATCCGAGAAT CCTGCGG-C-GCC-AGCCTGGCCGGACG GATCG CGCCCGGCTAGGCTGGGCAGGCCGCACG GGCGGCGCAGTGGCG Lcho_3227 3578342 - 3579430 + | LacI family transcription regulator Lcho_3228 3580962 - 3579427 - | tryptophan halogenase TERM 1842 3580004 - 3580036 + g 70 -13.4 -3.28712 | gap 1, opp_overlap 3579998, overlap 3580005 3580025 GTGGTGAAACGCAGC GCTCG-CGGTGCGGC CAGG GCCGCGCCGTCGAGG TTGTCGAGCAGCACC TERM 1843 3580005 - 3580035 + g 75 -16.9 -2.57132 | gap 1, opp_overlap 3579998, overlap 3580004 3580025 TGGTGAAACGCAGCG CTCG-CGGTGCGGC CAGG GCCGCGCCGTCGAG GTTGTCGAGCAGCAC TERM 1844 3581010 - 3580991 - R 88 -9.2 -4.62069 | overlap 3580992 TGTGGAGCGGAAAAA GGGGCGAC TTGC GTCGCCCG TAAAGTTGCAACCCG TERM 1845 3581009 - 3580992 - R 77 -12.7 -3.3692 | overlap 3580991 GTGGAGCGGAAAAAG GGGCGAC TTGC GTCGCCC GTAAAGTTGCAACCC Lcho_3229 3583698 - 3581071 - | TonB-dependent receptor TERM 1846 3583487 - 3583524 + g 70 -13.3 -3.4285 | gap 1, overlap 3583516 TTGTCTCGCTTGCCC GCGACGGCTGCC-CCTGC CGC GCCGGTGGCGGCCGATGC TTCTGCCTTGGCTGC TERM 1847 3583825 - 3583796 - R 73 -12.1 -3.37755 | overlap 3583786 3583794 AGAGAGGGTGAAAGA CCCGGCGGCTAAC TCGC GTTAGCTGCAGGG CAAAAAAAAGGAACC Lcho_3230 3585087 - 3583882 - | sodium/hydrogen exchanger Lcho_3231 3586329 - 3585109 - | hypothetical protein Lcho_3232 3586781 - 3586341 - | biopolymer transport protein ExbD/TolR Lcho_3233 3587220 - 3586792 - | biopolymer transport protein ExbD/TolR Lcho_3234 3588067 - 3587231 - | MotA/TolQ/ExbB proton channel Lcho_3235 3588815 - 3588138 - | TonB family protein TERM 1848 3588462 - 3588502 + g 72 -13.1 -3.55071 | CGGTGCGGCCGGCGC CGGTGCTGCGCGCACCGGC TCG GGCGGTGCGGGTGGCGGCG TTTCGGCCACTGTCG Lcho_3236 3589088 - 3588840 - | hypothetical protein Lcho_3237 3589439 - 3590470 + | LacI family transcription regulator Lcho_3238 3591583 - 3590507 - | periplasmic binding protein/LacI transcriptional regulator Lcho_3239 3593219 - 3591795 - | glycoside hydrolase family protein TERM 1849 3593022 - 3593055 + g 74 -9.5 -4.07568 | gap 1, overlap 3593022 3593028 GGTGATCACCGGCTT GG-CGCCCACCGCGTC GGC GATGCGGTAGGCCACC TTTTCGGACAGCCGC TERM 1850 3593295 - 3593265 - R 100 -16.1 -4.67755 | overlap 3593266 3593267 AGAGGGATGGAAAAA GCGCGCGCCAGGG TCGCG CCCTGGCGCGCAA GGCCTGCACGGTGTC TERM 1851 3593294 - 3593266 - R 100 -19.6 -3.3993 | overlap 3593265 3593267 GAGGGATGGAAAAAG CGCGCGCCAGGG TCGCG CCCTGGCGCGCA AGGCCTGCACGGTGT TERM 1852 3593293 - 3593267 - R 100 -20.9 -2.63476 | overlap 3593266 3593265 AGGGATGGAAAAAGC GCGCGCCAGGG TCGCG CCCTGGCGCGC AAGGCCTGCACGGTG Lcho_3240 3594661 - 3593357 - | extracellular solute-binding protein TERM 1853 3594197 - 3594215 + g 72 -11.6 -3.62046 | CATGTTGTTCAACTC GGCCAGCG TCA CGCCGGCC TTCTTGGCCACGTCC Lcho_3241 3595642 - 3594716 - | binding-protein-dependent transport systems inner membrane component Lcho_3242 3596679 - 3595726 - | binding-protein-dependent transport systems inner membrane component Lcho_3243 3596965 - 3597999 + | LacI family transcription regulator Lcho_3244 3598175 - 3599347 + | ABC transporter-related protein Lcho_3245 3599372 - 3601393 + | Beta-galactosidase TERM 1854 3602048 - 3602020 - g 73 -10.1 -3.90112 | opp_overlap 3602020 TGTGGCGCAAGGAAA GCCGGCGCGGCCG CAC CAGCCACGACTGC TTTCCCGGTGCGGTG Lcho_3246 3601416 - 3603602 + | glycoside hydrolase clan GH-D Lcho_3247 3603605 - 3604621 + | UDP-glucose 4-epimerase TERM 1855 3605649 - 3605620 - g 82 -15 -3.62597 | CTCACCCCCGAACAA GCCGCCGAACGC CTGCGT GCGCTCGGCGAC CAGCACTACCGCGGC Lcho_3248 3604618 - 3605670 + | galactose-1-phosphate uridylyltransferase Lcho_3249 3605684 - 3606847 + | galactokinase Lcho_3250 3606873 - 3607886 + | aldo/keto reductase Lcho_3251 3608612 - 3607902 - | ABC transporter-related protein Lcho_3252 3609835 - 3608615 - | hypothetical protein Lcho_3253 3611025 - 3609832 - | RND family efflux transporter MFP subunit Lcho_3254 3611621 - 3611022 - | TetR family transcriptional regulator Lcho_3255 3611790 - 3612908 + | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase TERM 1856 3613260 - 3613312 + G 70 -2.6 -4.52589 | gap 2, opp_overlap 3613251, overlap 3613297 ACACCAGCCCGCGCG GCGCGGGCGTGATCGGCGAAGACC AGCATTG GGACTTCGGCG-TCG-GCGCGGGC TTTTATGTGGACGCC Lcho_3256 3612989 - 3613855 + | S-formylglutathione hydrolase TERM 1857 3614349 - 3614385 + G 81 -15.9 -3.53012 | gap 1 GGCCCGACCGTGCAG GTCGGCGCCGG-CGTG ATGCAG CACGCCCGGCGCTGGC TTTCGCCCGGCGCCG TERM 1858 3614812 - 3614836 + G 70 -12.7 -3.28712 | TGATCGGCCTCGTTA CCGGCGGCGCC ACG GCCGGCGCCGG TTATGCGCCCACCCG Lcho_3257 3613902 - 3615242 + | chloride channel core Lcho_3258 3616548 - 3615274 - | hypothetical protein Lcho_3259 3617729 - 3616599 - | FAD linked oxidase domain-containing protein Lcho_3260 3619293 - 3617755 - | FAD linked oxidase domain-containing protein Lcho_3261 3620630 - 3619371 - | hypothetical protein Lcho_3262 3621555 - 3620680 - | hypothetical protein Lcho_3263 3622638 - 3621649 - | GumN family protein Lcho_3264 3623617 - 3622631 - | hypothetical protein Lcho_3265 3623669 - 3624802 + | hypothetical protein Lcho_3266 3624969 - 3625265 + | hypothetical protein Lcho_3267 3625419 - 3627806 + | ATPase central domain-containing protein TERM 1859 3628505 - 3628488 - g 74 -7.7 -4.20783 | gap 1 AGCTGATGGAAGAAA CCGGCGAG CGC CT-GCCGG TGATCATCTCGGGCA Lcho_3268 3627851 - 3628924 + | homocysteine S-methyltransferase Lcho_3269 3629408 - 3628941 - | outer membrane protein TERM 1860 3631061 - 3631028 - g 70 -9.5 -3.79906 | gap 1 CGAGGCCGAGAAGAA GGCCCTGCAGGACGCC GGC GGCGACGT-CAAGGCC AAGGGCAAGATCGTC Lcho_3270 3629748 - 3632522 + | methionine synthase Lcho_3271 3635489 - 3632544 - | protein of unknown function DUF940 membrane lipoprotein putative Lcho_3272 3636229 - 3635531 - | putative lipoprotein TERM 1861 3636267 - 3636252 - R 100 -10.4 -6.02914 | TCCAGACAAAAAAAA TGCCCC TCGC GGGGCA GGCTTGATCAGGAAG Lcho_3273 3636549 - 3636292 - | hypothetical protein Lcho_3274 3637855 - 3636737 - | glutamate 5-kinase Lcho_3275 3639018 - 3637909 - | GTP-binding protein Obg/CgtA TERM 1862 3639086 - 3639069 - R 100 -14.1 -4.98531 | GCGCCAAAGCAAAAA GCCCCGG CGCG CCGGGGC TTCACACGCGATGGA Lcho_3276 3639365 - 3639108 - | ribosomal protein L27 TERM 1863 3639323 - 3639350 + g 95 -5.4 -5.37043 | overlap 3639312 3639324 3639325 TTTTCGGTTGGGAGT CACGGCCGTTCC GTGT GGAACCGCCGCC TTTTTTCTGTGCCAT Lcho_3277 3639707 - 3639396 - | ribosomal protein L21 TERM 1864 3639438 - 3639453 + g 70 -4.6 -4.33105 | CTCGGTGAAGTTCTG GCGGTG ACCT TGCCGC TTTTGGTAGTGCTTG Lcho_3278 3640036 - 3640977 + | polyprenyl synthetase TERM 1865 3641096 - 3641125 + F 72 -11.6 -3.53224 | gap 1, opp_overlap 3641102, overlap 3641098 3641102 TGCAGCCCAAGGATG C-ACAAAGCCCCA CTCGC TGGGGCTTTGTCG TTTCCGAGCCGGGTA TERM 1866 3641098 - 3641122 + F 73 -14.4 -2.90496 | opp_overlap 3641102, overlap 3641096 3641102 CAGCCCAAGGATGCA CAAAGCCCCA CTCGC TGGGGCTTTG TCGTTTCCGAGCCGG TERM 1867 3641102 - 3641118 + F 76 -9.4 -4.13654 | opp_overlap 3641102, overlap 3641098 3641096 CCAAGGATGCACAAA GCCCCA CTCGC TGGGGC TTTGTCGTTTCCGAG TERM 1868 3641118 - 3641102 - f 75 -9.4 -3.95153 | opp_overlap 3641098 3641096 3641102 CCAAGGATGCACAAA GCCCCA CTCGC TGGGGC TTTGTCGTTTCCGAG Lcho_3279 3641192 - 3641470 + | acylphosphatase TERM 1869 3641710 - 3641683 - g 84 -2.6 -5.19212 | gap 1, overlap 3641687 ATCACCATGAAAAAA CCGACCGCAA-CG GGA CGATTGCCGCAGG ACTGATCGCCATGCC Lcho_3280 3641455 - 3641715 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Lcho_3281 3641870 - 3642034 + | hypothetical protein Lcho_3282 3643123 - 3642095 - | oxidoreductase domain-containing protein TERM 1870 3642298 - 3642326 + g 71 -14.5 -3.01712 | GCACACCGTGGGCGT CGCTGCGCACGAT GCG GTCGCGCGCGGCG TGTTCGCCCACCAGC Lcho_3283 3644118 - 3643123 - | inositol 2-dehydrogenase TERM 1871 3644218 - 3644245 + H 72 -8.5 -4.18018 | opp_overlap 3644224 ATAGCCAAGCACTTT CGAGAATGGAA TTTTTT TTCCATGCTCG TTTTCCATGGAACCA Lcho_3284 3644426 - 3645256 + | xylose isomerase domain-containing protein Lcho_3285 3645281 - 3646414 + | LacI family transcription regulator Lcho_3286 3650447 - 3646440 - | NACHT family-like NTPase TERM 1872 3648410 - 3648363 - G 79 -7.4 -4.57073 | overlap 3648364 CACGGCGCGCAAAAA GGCATCGCGCCCGCTCGGCTGA TCGT CCAGCGTGGCGGTCGCGAAGCG CAGCACGTCGAGCCA TERM 1873 3648749 - 3648785 + g 71 -15.8 -2.57468 | gap 1, overlap 3648748 AGCGCAGCACGTCCA GGCGCTG-CGCCGGCAG CAGG CCGTCGGCGGCGGCGCC CTTGGTGTCCTCCCA TERM 1874 3649347 - 3649323 - G 73 -14.9 -3.14344 | CAGGTGGGTGATGAA GCGCGGCACGC TCA GCGCGCCGCCC TGCGGCAGCCGCGCC Lcho_3287 3651372 - 3650494 - | RpiR family transcriptional regulator TERM 1875 3651837 - 3651791 - g 75 -15.1 -3.2963 | gap 1 ATGACGCCCGGACAA TGCGCGCTGCGCGCCGCCGCCG ATTA CGACCGCGAC-CGCATCACGCA CATCGTCGCGACGGT TERM 1876 3652182 - 3652133 - g 71 -15.5 -3.06183 | gap 1 GTGACGGTGATCGAA GGCGCGCCGCGGCTGCTCGGC-CG CGC CGTGCCGGCCAGCATCGGCGCGCA GGTGCTGGCGCTGCA Lcho_3288 3651584 - 3652861 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1877 3653663 - 3653608 - g 70 -13.9 -3.23853 | gap 1, overlap 3653606 3653609 CGCGTTCAAGGAATA CGAGGCCGACGTGGCG-GGCGGCGCC TACCC GGCGCAGCAGCACCAGGTCGGCATCA CGGCCGACGAGTTGG Lcho_3289 3652910 - 3653707 + | ketopantoate hydroxymethyltransferase Lcho_3290 3653752 - 3654600 + | formyltetrahydrofolate deformylase TERM 1878 3655305 - 3655283 - g 70 -12.6 -3.28712 | overlap 3655295 GGGCGTGCCGCACAA CGCGGCGATG AAC CGCCGCCGCG GCCTGGCCGGCCGCG Lcho_3291 3654597 - 3655598 + | hypothetical protein Lcho_3292 3656319 - 3655573 - | integral membrane protein TerC TERM 1879 3656425 - 3656443 + r 81 -11.6 -4.11216 | CTGACGCGCCGATCA GGCCCGGC GCC GCCAGGCC TTTTCGGCCTCGACC Lcho_3293 3659091 - 3656422 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 1880 3659653 - 3659605 - g 70 -12.4 -3.37796 | gap 2, opp_overlap 3659637 CGTCACGACCGACAA CCACGCCAGC--GGCCAGCTGGCG GCG CGACAGCTGGCCGAGCTGATGGGG CAGCGCGGCCGTGTC Lcho_3294 3659207 - 3660163 + | periplasmic binding protein/LacI transcriptional regulator TERM 1881 3660744 - 3660774 + G 71 -8.9 -4.07885 | GGCCCTGCACCTGTG GGTGCTCAAGCCG CTGAC CAGCCTGAGCGCC TTTTCCAGCCGGGTC Lcho_3295 3660148 - 3662580 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Lcho_3296 3662602 - 3663378 + | pseudouridine synthase Lcho_3297 3664801 - 3663359 - | Beta-fructofuranosidase Lcho_3298 3665964 - 3664798 - | LacI family transcription regulator TERM 1882 3664901 - 3664949 + g 85 -19.7 -2.52464 | gap 3 TCGCGCGCGATCACT TCGCCGGCGA-CGCGCTGCCAGGC TTCG GCC-GGC-GCGGGCTCGCCGGCGA TGCGTTCCAGCAGGC Lcho_3299 3666209 - 3667474 + | extracellular solute-binding protein TERM 1883 3667794 - 3667764 - g 70 -13.3 -3.40309 | gap 1, overlap 3667754 GAGAAGGACGCACAA GGC-GCCATCGCCC GCGA GGCCGATGGCAGCC CCACCTATCCGGGCC Lcho_3300 3667503 - 3668627 + | binding-protein-dependent transport systems inner membrane component Lcho_3301 3668659 - 3669534 + | binding-protein-dependent transport systems inner membrane component Lcho_3302 3669607 - 3670611 + | ABC transporter-related protein Lcho_3303 3670933 - 3670622 - | Rieske (2Fe-2S) domain-containing protein Lcho_3304 3672039 - 3670963 - | fatty acid desaturase TERM 1884 3671460 - 3671485 + g 71 -14.7 -3.01712 | CGGCGTCGAGCCGGC CCAGCGCGTTG GCCA CAACGCGCAGG TATTCGACCGGGCCG TERM 1885 3671801 - 3671767 - G 78 -2.6 -4.8048 | overlap 3671782 GGCGTAGACGAAAAA CGCCAGCCAGAACCAG CCG CTGCCCCAGGTCAGCG CCATCCACGCGCCCG Lcho_3305 3672233 - 3673285 + | LacI family transcription regulator Lcho_3306 3673361 - 3673783 + | hypothetical protein Lcho_3307 3673934 - 3674380 + | dual specificity protein phosphatase Lcho_3308 3674579 - 3675460 + | LysR family transcriptional regulator Lcho_3309 3675836 - 3675474 - | hypothetical protein Lcho_3310 3677060 - 3675870 - | diguanylate cyclase Lcho_3311 3678197 - 3677172 - | monosaccharide-transporting ATPase Lcho_3312 3679861 - 3678314 - | ABC transporter-related protein TERM 1886 3679919 - 3679880 - R 72 -13.5 -3.05384 | gap 1, opp_overlap 3679880 3679876 GCTTCCTTCATGCAA CCGCCGCAGGCGGCCCGC GCGAT GCGGGCGGC-TGCAGGGG TCGGTTCACTCCGTG Lcho_3313 3680915 - 3679986 - | periplasmic binding protein/LacI transcriptional regulator Lcho_3314 3681143 - 3683083 + | ribokinase-like domain-containing protein Lcho_3315 3683144 - 3685000 + | thiamine pyrophosphate protein central region Lcho_3316 3685020 - 3685949 + | xylose isomerase domain-containing protein TERM 1887 3686227 - 3686197 - g 74 -7.4 -4.26903 | opp_overlap 3686200 CGTATTCGAGGAAAA GTCGCCCGACGC GCTGTAT GTGCCGGGCGGC CTGGCCGTCACCATC Lcho_3317 3685961 - 3686758 + | myo-inositol catabolism IolB domain-containing protein TERM 1888 3687699 - 3687675 - g 90 -17.1 -3.64822 | AGCTGGGTATGGAAA GCGGCCGCACC AAC GGCGCGACCGC TGCTGCAGATGTCAA Lcho_3318 3687110 - 3688057 + | hypothetical protein TERM 1889 3688137 - 3688155 + F 100 -13.8 -5.13722 | opp_overlap 3688137 TGCGTCAAGCCAGAA GGGTCGGC CTA GCCGGCCC TTTTCTTTTGGTCGA TERM 1890 3688155 - 3688137 - f 70 -11.6 -3.41878 | opp_overlap 3688137 TGCGTCAAGCCAGAA GGGTCGGC CTA GCCGGCCC TTTTCTTTTGGTCGA Lcho_3319 3688173 - 3689258 + | oxidoreductase domain-containing protein Lcho_3320 3693018 - 3689566 - | phosphorylase kinase alphabeta TERM 1891 3691421 - 3691393 - G 70 -12.4 -3.39449 | gap 1, overlap 3691387 CGGCAGGAAGACGAA GCCGCGGTCGACG GCCT CGTCG-CCGTGGC GCTGCAGGTAGAGGC Lcho_3321 3695311 - 3693125 - | 1,4-alpha-glucan branching enzyme Lcho_3322 3697423 - 3695405 - | alpha amylase catalytic region TERM 1892 3696190 - 3696206 + g 73 -13.7 -3.31248 | overlap 3696195 CGTCGGGGATGTGGT GGCGCTG CTC CAGCGCC TTCTGCAGCATGTTG Lcho_3323 3699174 - 3697462 - | alpha amylase catalytic region TERM 1893 3698553 - 3698504 - G 79 -14.2 -3.72576 | gap 1, overlap 3698489 CCGGGCTGCAGGAAA CCCTCGCGCACCACCGGC-GCGT CGGGC AGGCTGCCGTCGGCGCGCCAGGG CTTGGAGATCATGTT Lcho_3324 3700384 - 3699248 - | ABC transporter-related protein Lcho_3325 3702109 - 3700439 - | alpha amylase catalytic region Lcho_3326 3703780 - 3702137 - | alpha amylase catalytic region Lcho_3327 3704619 - 3703783 - | binding-protein-dependent transport systems inner membrane component Lcho_3328 3705533 - 3704619 - | binding-protein-dependent transport systems inner membrane component TERM 1894 3705593 - 3705560 - R 81 -9.6 -4.29326 | overlap 3705562 3705563 TGGAAAGCCAAGAAA CAGGCGGGGC-GCCAC CATC GCGGCCGCCCCG-CTA CGGCCGCCACCCGGG TERM 1895 3705592 - 3705562 - R 80 -12.5 -3.74101 | gap 1, overlap 3705560 3705563 GAAAGCCAAGAAACA GGCGGGGC-GCCAC CATC GCGGCCGCCCCGCT ACGGCCGCCACCCGG TERM 1896 3705591 - 3705563 - R 80 -16 -2.83376 | gap 1, overlap 3705562 3705560 AAAGCCAAGAAACAG GCGGGGC-GCCAC CATC GCGGCCGCCCCGC TACGGCCGCCACCCG Lcho_3329 3706902 - 3705631 - | extracellular solute-binding protein TERM 1897 3707062 - 3707049 - H 78 -3.1 -4.84918 | overlap 3707050 TGGACAAATACAAAA CGCAA TCGA TTGCA TCTCTTCCAGTGAAA TERM 1898 3707333 - 3707355 + G 71 -6.1 -4.18018 | overlap 3707327 TGCTCGCGCACGGCT CGCCGCCGG TTCGT CACGCGGCG TTTTCGCTGCCCAAC TERM 1899 3708408 - 3708384 - g 70 -13.6 -3.21099 | gap 1, overlap 3708385 GTCGGGCAGCACCAA GGTCGCGCACC GCCC GGTGCGCG-CC GCCGATCCGACCGCC Lcho_3330 3707146 - 3708996 + | glucokinase Lcho_3331 3709076 - 3710215 + | aldose 1-epimerase Lcho_3332 3711739 - 3710222 - | methylmalonate-semialdehyde dehydrogenase TERM 1900 3711660 - 3711686 + g 79 -15.9 -3.29471 | gap 1, opp_overlap 3711649 AAGACCGGCTGCGTG CGGCCGTTGCCG GGCA CGGCA-CGGCCG TTGATGTGGTGGCCC Lcho_3333 3711919 - 3712863 + | LysR family transcriptional regulator Lcho_3334 3713658 - 3712882 - | short-chain dehydrogenase/reductase SDR Lcho_3335 3713767 - 3715191 + | peptidase M48 Ste24p Lcho_3336 3715205 - 3715939 + | hypothetical protein Lcho_3337 3715967 - 3716785 + | hypothetical protein TERM 1901 3716836 - 3716805 - T 71 -10 -3.57144 | opp_overlap 3716807 3716810, overlap 3716806 CGTCCGACCCTGAAA CGGCAGCGGGGCCT TCAC AGGCCCCGCTTGCT TTTCGTGCGGTCCGA TERM 1902 3716807 - 3716835 + T 100 -16.8 -4.26903 | gap 1, opp_overlap 3716806 3716805, overlap 3716810 TCCGACCCTGAAACG GC-AGCGGGGCCT TCAC AGGCCCCGCTTGC TTTTCGTGCGGTCCG TERM 1903 3716810 - 3716831 + T 93 -17.3 -3.71672 | opp_overlap 3716806 3716805, overlap 3716807 GACCCTGAAACGGCA GCGGGGCCT TCAC AGGCCCCGC TTGCTTTTCGTGCGG Lcho_3338 3717327 - 3716893 - | UspA domain-containing protein Lcho_3339 3717633 - 3717442 - | 4-oxalocrotonate tautomerase Lcho_3340 3718714 - 3717677 - | 4-hydroxy-2-oxovalerate aldolase Lcho_3341 3719646 - 3718729 - | acetaldehyde dehydrogenase (acetylating) Lcho_3342 3720451 - 3719663 - | 4-oxalocrotonate decarboxylase TERM 1904 3720576 - 3720561 - R 70 -4.6 -4.41348 | overlap 3720563 GGGGGCTCAAATAAA CCGCAC CGAC GTGCTG CCCAGCCCGCCCACG Lcho_3343 3721334 - 3720552 - | 2-oxopent-4-enoate hydratase Lcho_3344 3722252 - 3721383 - | alpha/beta hydrolase fold Lcho_3345 3722424 - 3723284 + | LysR family transcriptional regulator Lcho_3346 3723544 - 3724686 + | extracellular ligand-binding receptor Lcho_3347 3725793 - 3724801 - | integral membrane protein TerC Lcho_3348 3726004 - 3726885 + | LysR family transcriptional regulator Lcho_3349 3727330 - 3726896 - | hypothetical protein Lcho_3350 3727651 - 3727992 + | hypothetical protein Lcho_3351 3729341 - 3728061 - | citrate transporter TERM 1905 3728769 - 3728732 - G 71 -16.3 -2.65815 | gap 1 GCCACAGCCACAGCA GCGCCAGG-CTCAGCGCC ACC GGCGGCAAGGCCTGGCGC ACGTAGCCGCCGAAG TERM 1906 3729303 - 3729269 - G 71 -15 -3.0497 | AGACCACGGCGAACA CGGCCACGATGCCC AGGTCGA GGGCGTCATGGCCG AGCAGGTTGACGGTC Lcho_3352 3729571 - 3729984 + | HI0074 family nucleotidyltransferase substrate binding protein Lcho_3353 3729981 - 3730319 + | DNA polymerase beta subunit Lcho_3354 3731815 - 3730361 - | 2-hydroxymuconic semialdehyde dehydrogenase Lcho_3355 3732317 - 3731862 - | hypothetical protein Lcho_3356 3733281 - 3732337 - | catechol 2,3 dioxygenase Lcho_3357 3733673 - 3733281 - | ferredoxin Lcho_3358 3734745 - 3733681 - | oxidoreductase FAD/NAD(P)-binding subunit Lcho_3359 3735120 - 3734764 - | phenol hydroxylase region Lcho_3360 3736703 - 3735117 - | methane/phenol/toluene hydroxylase Lcho_3361 3736997 - 3736728 - | monooxygenase component MmoB/DmpM Lcho_3362 3738025 - 3737030 - | phenol 2-monooxygenase Lcho_3363 3738303 - 3738073 - | phenol hydroxylase subunit TERM 1907 3739513 - 3739496 - g 86 -9.8 -4.56597 | overlap 3739497 TTCGGCGCCGAAAAA GGCGCC TACACC GGCGCC GGTGCGGCGCGCGCC TERM 1908 3739513 - 3739561 + G 76 -11.6 -3.86015 | opp_overlap 3739497 CGCCTACACCGGCGC CGGTGCGGCGCGCGCCGG-GCGCT TCG AGCGCGCCGACG-GCGGCACGCTG TTTCTCGACGAGCTG Lcho_3364 3738503 - 3740260 + | putative sigma54 specific transcriptional regulator Lcho_3365 3740271 - 3741014 + | GntR family transcriptional regulator Lcho_3366 3743352 - 3741064 - | PAS/PAC sensor hybrid histidine kinase TERM 1909 3741327 - 3741340 + g 72 -5.2 -4.37886 | overlap 3741307 3741323 TGCCGATCATCGCGA CGGC CTCTTC GCCG TTTTCTGCCAGGTCG Lcho_3367 3744321 - 3743383 - | rhodanese domain-containing protein TERM 1910 3743628 - 3743594 - G 91 -17.8 -3.72576 | opp_overlap 3743572 3743571 3743593 TCGGCCGGCAGGAAA CGGCCGTCCGCGCCGA GGT TCTGCGTGAACGGCCG GTTCAATGCGCCGGG Lcho_3368 3745205 - 3744318 - | putative transmembrane protein Lcho_3369 3745343 - 3746488 + | glycerophosphoryl diester phosphodiesterase TERM 1911 3746522 - 3746549 + T 88 -15.6 -3.34398 | opp_overlap 3746495 3746494 3746522 3746523 3746527, overlap 3746523 3746527 GACGCCGCGCCAAAA GGAAAGGCCCGC TCGT GCGGGCCTTTCA TCTTTCACAGGGACC TERM 1912 3746549 - 3746522 - T 95 -15.6 -4.07885 | opp_overlap 3746522 3746523 3746527, overlap 3746495 3746494 3746523 3746527 GACGCCGCGCCAAAA GGAAAGGCCCGC TCGT GCGGGCCTTTCA TCTTTCACAGGGACC TERM 1913 3746523 - 3746548 + T 89 -19.1 -2.60496 | opp_overlap 3746494 3746522 3746523 3746527, overlap 3746522 3746527 ACGCCGCGCCAAAAG GAAAGGCCCGC TCGT GCGGGCCTTTC ATCTTTCACAGGGAC TERM 1914 3746548 - 3746523 - T 93 -19.1 -3.04517 | opp_overlap 3746523 3746522 3746527, overlap 3746494 3746522 3746527 ACGCCGCGCCAAAAG GAAAGGCCCGC TCGT GCGGGCCTTTC ATCTTTCACAGGGAC TERM 1915 3746544 - 3746527 - T 93 -14.1 -4.19735 | opp_overlap 3746523 3746522 3746527, overlap 3746523 3746522 CGCGCCAAAAGGAAA GGCCCGC TCGT GCGGGCC TTTCATCTTTCACAG TERM 1916 3746527 - 3746544 + T 93 -14.1 -4.00532 | opp_overlap 3746527 3746523 3746522, overlap 3746523 3746522 CGCGCCAAAAGGAAA GGCCCGC TCGT GCGGGCC TTTCATCTTTCACAG Lcho_3370 3747745 - 3746579 - | Rieske (2Fe-2S) domain-containing protein TERM 1917 3747500 - 3747535 + g 73 -13.8 -3.33696 | opp_overlap 3747493 GGACACCAGCTCGAC GCCTTGGGCCGTGCGC ACCA GCGCGCGGCCCTCGCC TTCGTTGGCCAGGGC Lcho_3371 3747965 - 3748210 + | exodeoxyribonuclease VII, small subunit Lcho_3372 3748207 - 3749103 + | polyprenyl synthetase Lcho_3373 3749139 - 3751058 + | deoxyxylulose-5-phosphate synthase Lcho_3374 3752115 - 3751072 - | heat shock protein DnaJ domain-containing protein TERM 1918 3752183 - 3752219 + H 70 -5 -4.41348 | opp_overlap 3752182 3752193, overlap 3752184 ATTGAGGGAACGCAG CGGTTCGAAAGGACGC ACGGG GCATCCTGACGAACCC TTTGTTTGGAGGAAC Lcho_3375 3752239 - 3752679 + | heat shock protein Hsp20 TERM 1919 3753036 - 3753002 - g 82 -18.6 -3.15544 | overlap 3753005 CTTCACGCTCAGCAA GGAGCTCGACGCCGAC CAG GTCAGCGCCGAGCTCA GCCAGGGCGTGCTGC TERM 1920 3753033 - 3753005 - g 84 -18.9 -2.78216 | overlap 3753002 CACGCTCAGCAAGGA GCTCGACGCCGAC CAG GTCAGCGCCGAGC TCAGCCAGGGCGTGC Lcho_3376 3752721 - 3753113 + | heat shock protein Hsp20 Lcho_3377 3753467 - 3753147 - | cytochrome c class I Lcho_3378 3754760 - 3753492 - | putative glucose/sorbosone dehydrogenase TERM 1921 3756383 - 3756423 + G 78 -8.2 -4.36914 | gap 2, opp_overlap 3756383, overlap 3756385 3756387 CTGCTGCTCGACGAA CTCGGCGAGCTGCCGCTGGC GCT GCAGGCGGC-GCT-GCTGCG TTTTCTGGACGACCA Lcho_3379 3755018 - 3756973 + | putative phytochrome sensor protein Lcho_3380 3758048 - 3756975 - | putative zinc protease protein Lcho_3381 3760168 - 3758045 - | molybdopterin oxidoreductase Lcho_3382 3760272 - 3761480 + | amidohydrolase Lcho_3383 3761477 - 3762154 + | ThiJ/PfpI domain-containing protein Lcho_3384 3762785 - 3762165 - | HAD family hydrolase TERM 1922 3762809 - 3762839 + r 72 -13.3 -3.16564 | gap 1, opp_overlap 3762794 3762793 3762791 3762808 3762831 CGGTTAACAGCTAAC CGCACGGGCTGCGC TCAA GCG-AGCCCGTGCC TTCATCGCGTCAGCC Lcho_3385 3764486 - 3762849 - | glucose-6-phosphate isomerase TERM 1923 3763755 - 3763794 + g 72 -16.4 -2.72344 | overlap 3763755 GGTGGTGATGCCGAA CTTGGCGGCCGCCGCCAC GTTG GTGGTGCTGGCCGCGAAG TGCTTGGCGATCGCC TERM 1924 3764183 - 3764161 - G 74 -4.6 -4.56775 | opp_overlap 3764168, overlap 3764162 3764163 ACGTCGTCCGAAAAA GGTGCGGCGC CAC GCGGCGCGCG CAAGGCGGTGTGCAG Lcho_3386 3765464 - 3764517 - | transaldolase TERM 1925 3766850 - 3766908 + G 87 -18 -3.53343 | CTGGAACTGCACCTG TCGGCGGCCAAGGGCAGCGGCGTCAGCG ACA CGCTGGCGCCGGTGTCGCTGGACCTCGA TTTCGACAAGGCCTT Lcho_3387 3765716 - 3767173 + | glucose-6-phosphate 1-dehydrogenase Lcho_3388 3767281 - 3768135 + | RpiR family transcriptional regulator Lcho_3389 3768430 - 3768167 - | sulfate transporter/antisigma-factor antagonist STAS Lcho_3390 3769071 - 3768457 - | toluene tolerance family protein TERM 1926 3768600 - 3768615 + g 74 -4 -4.57073 | gap 1 TGACGTCGTAGATCT TCCAGGT GTC ACC-GGA TTTTTCGAGGCGGTA Lcho_3391 3769983 - 3769174 - | VacJ family lipoprotein Lcho_3392 3770462 - 3769980 - | hypothetical protein Lcho_3393 3771260 - 3770481 - | hypothetical protein Lcho_3394 3772093 - 3771257 - | ABC transporter-related protein TERM 1927 3772221 - 3772206 - R 100 -11.8 -4.8622 | GTCGGCAAGCAAAAA GCCGCC CGCA GGCGGC TTCGGACCGAGCGCA Lcho_3395 3773717 - 3772242 - | glutamate synthase, NADH/NADPH, small subunit TERM 1928 3773743 - 3773782 + r 93 -15.6 -3.90112 | gap 1, overlap 3773744 3773746 CAATCTTTAGGTTGA TCG-GCGTTCGCCGCGCGC CCG GCGCGCGGCGGGGGCTCGC TTTACTTGGCCGGGA TERM 1929 3773744 - 3773781 + r 93 -19.1 -2.93853 | gap 1, overlap 3773743 3773746 AATCTTTAGGTTGAT CG-GCGTTCGCCGCGCGC CCG GCGCGCGGCGGGGGCTCG CTTTACTTGGCCGGG TERM 1930 3773746 - 3773778 + r 93 -20.5 -2.70979 | overlap 3773744 3773743 TCTTTAGGTTGATCG GCGTTCGCCGCGCGC CCG GCGCGCGGCGGGGGC TCGCTTTACTTGGCC Lcho_3396 3778550 - 3773784 - | glutamate synthase (ferredoxin) TERM 1931 3777835 - 3777814 - G 76 -11.5 -3.85698 | opp_overlap 3777824 GTGTTGGTCGAGAAA CGCTGGTGC ACCA GCGCCAGCG CCGAGGTGCAGGCCG TERM 1932 3778449 - 3778463 + g 78 -11.4 -3.96148 | opp_overlap 3778448 3778447 3778451 GTGCGCGACGAAACC GACGCC GCA GGCGTC TTTCTCGTGGGCCGG Lcho_3397 3779426 - 3778713 - | hypothetical protein Lcho_3398 3779521 - 3780444 + | cysteine synthase A Lcho_3399 3781600 - 3780455 - | deoxyguanosinetriphosphate triphosphohydrolase Lcho_3400 3782834 - 3781713 - | 3-dehydroquinate synthase TERM 1933 3781811 - 3781824 + g 70 -9.5 -3.79906 | CGACGAAGCGGATCT GGCCG TCCT CGGCC TTCTTGTCGACCTGC Lcho_3401 3783434 - 3782886 - | shikimate kinase TERM 1934 3783598 - 3783585 - R 80 -5.2 -4.84359 | overlap 3783587 CCACGTTCAGAAAAA GCGC CACCTT GCGC ACCAAGGGACTCCAC Lcho_3402 3785323 - 3783635 - | hypothetical protein TERM 1935 3785164 - 3785142 - G 72 -12 -3.71527 | opp_overlap 3785138 CCTGAATTACTCAAA CTGGTGTTGC TCA GCGACACCAG TAAATCTGCTGCGGT Lcho_3403 3787554 - 3785374 - | type IV pilus secretin PilQ TERM 1936 3786429 - 3786475 + g 72 -5.2 -4.4078 | opp_overlap 3786421 GGAACGACTGCGTGC GCAGCGGTTCGAGGTCG-GCGA TCTGC TTGCGCG-CCTCGAGTTCCTGC TTTTCCTTGGCCGCC TERM 1937 3787142 - 3787103 - G 70 -2.8 -4.56597 | gap 2, overlap 3787104 3787107 TGGCTCTCGGAAAAA TGCACCGGCTCGCTCGGC GCCGTG GCC-AGCGCGGCGGC-CA CCGGCACCGGCTCGA Lcho_3404 3788111 - 3787551 - | pilus assembly protein PilP TERM 1938 3788087 - 3788130 + g 76 -3.9 -4.65916 | gap 3, overlap 3788101 CGGTGGCCAGCGCCG CCAGCGTCAGGCGTCGGGG-GA GCA TCACTTCG-CGCCTC-CGTTGG TTTTCTTGGCATCGG Lcho_3405 3788827 - 3788111 - | pilus assembly protein PilO Lcho_3406 3789476 - 3788838 - | fimbrial assembly family protein Lcho_3407 3790531 - 3789473 - | type IV pilus assembly protein PilM TERM 1939 3792346 - 3792314 - g 88 -9.8 -4.62069 | gap 1, opp_overlap 3792334 GCCGCACTCGAAAAA GGCATCGGCC-CCGC CACG GTGGTGGACGATGCC CCCCTGTTCTTCGAC TERM 1940 3793097 - 3793087 - g 76 -8.2 -4.24948 | GTACTACAGCGAAAA CGCC AAC GGCG AAGGCGTCTCGACAC Lcho_3408 3790895 - 3793195 + | 1A family penicillin-binding protein Lcho_3409 3793631 - 3793245 - | iron donor protein CyaY TERM 1941 3793390 - 3793428 + g 73 -14.5 -3.22223 | gap 1, opp_overlap 3793384 TGGAATCCACCCGCC CGCGCAGCCAGCCACAGC TCCT GCAGCGGC-GGCTGCGTG TTGATGATGAGCTTG Lcho_3410 3793901 - 3795169 + | diaminopimelate decarboxylase Lcho_3411 3795926 - 3795198 - | hypothetical protein TERM 1942 3796130 - 3796113 - R 95 -10.5 -4.72272 | TGCCTTCATGAAAAA GGCCACC CGAA GGCGGCC TGCGTGGATGCGCGT Lcho_3412 3797418 - 3796165 - | outer membrane protein (porin)-like protein TERM 1943 3797534 - 3797551 + r 84 -14.1 -3.66178 | opp_overlap 3797534 TCTCTCAACGAAAAA GCCGCCC CAAG GGGCGGC TTTCAGCTTGAAGGC TERM 1944 3797551 - 3797534 - R 100 -14.1 -4.8622 | opp_overlap 3797534 TCTCTCAACGAAAAA GCCGCCC CAAG GGGCGGC TTTCAGCTTGAAGGC Lcho_3413 3798627 - 3797581 - | outer membrane porin Lcho_3414 3798894 - 3799544 + | putative ubiquinone biosynthesis protein Lcho_3415 3799985 - 3799563 - | OsmC family protein TERM 1945 3800249 - 3800268 + H 100 -12.1 -5.90981 | opp_overlap 3800238 3800249 TAAAGGTGGATTAAA CCCGGGG TTCATC CCCCGGG TTTTTTTTCGTCTGC TERM 1946 3800268 - 3800249 - H 80 -12.1 -3.75461 | opp_overlap 3800249, overlap 3800238 TAAAGGTGGATTAAA CCCGGGG TTCATC CCCCGGG TTTTTTTTCGTCTGC Lcho_3416 3800461 - 3801966 + | threonine dehydratase, biosynthetic TERM 1947 3802155 - 3802189 + G 70 -13.4 -3.34715 | opp_overlap 3802153 3802152, overlap 3802153 CCTGATCCAGAACGC CCTGCGGCCGCGCCTG CGC CAGCCGCAGCTGCTGG TCTTTGCGGGCGATC Lcho_3417 3802003 - 3803097 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Lcho_3418 3803726 - 3803139 - | general secretion pathway protein C TERM 1948 3803709 - 3803696 - G 72 -3.7 -4.54477 | overlap 3803697 3803699 GCAAAACCCAGAAAA CGAGG CTGG CCGCG AGTGCGGCCCAGACC Lcho_3419 3803828 - 3804280 + | general secretion pathway protein G TERM 1949 3804468 - 3804429 - gf 77 -12.7 -3.36273 | gap 1, overlap 3804430 CGCCTCGAACACGAA GCCGCGCGCCTGGCCACG CTGCT CGAGGCCGGCCGCGCG-C AATCGCGTGCGCTGG Lcho_3420 3804255 - 3804785 + | general secretion pathway protein H Lcho_3421 3804811 - 3805152 + | general secretion pathway protein I Lcho_3422 3805171 - 3805869 + | general secretion pathway protein J Lcho_3423 3805896 - 3806879 + | general secretion pathway protein K Lcho_3424 3806953 - 3808239 + | general secretion pathway L Lcho_3425 3808236 - 3808748 + | general secretion pathway M protein Lcho_3426 3808753 - 3809712 + | general secretion pathway protein N TERM 1950 3810376 - 3810421 + G 77 -11.1 -4.07885 | gap 1 GTGTCGAGGTGATCG CGCTGCAGCA-CGGCGTGGCGT CCG ACCTGGCGCCGCTGGTGCAGCG TTTTGCCGACACCTC TERM 1951 3810605 - 3810569 - g 73 -13.6 -3.35679 | gap 1 GGCGGTGATCGACAA GCTCGACCGGCCCAGCG CCAA CGGCGGGCCGGGCG-GC AACATCTATGTCGTC TERM 1952 3810687 - 3810632 - g 82 -15.5 -3.65046 | gap 3, opp_overlap 3810682 CGTCTACCTGAAGAA CGCCGACGCCACCA-A-GCTG-GCGCAG GTG CTGCGCGCGGCCTATGGCGGCGCCGGTG GCGGCTCGAGCGGCG TERM 1953 3810682 - 3810718 + G 87 -20.2 -3.05384 | gap 1, opp_overlap 3810632 CGGCCTATGGCGGCG CCGGTGGCGGCTCGAGC GGCG GCTCG-GCGGCCACCGG TTCGCTCGCCAGCGC Lcho_3427 3809715 - 3811976 + | general secretion pathway protein D TERM 1954 3812558 - 3812515 - g 81 -8.6 -4.59109 | gap 1 GACATCGCCGAAAAA CGCCTGCCGCAGGAC-GGCCG CAT CAGCCTGCGCATCGGCGGGCG GGCGATCGACGTGCG Lcho_3428 3811993 - 3813408 + | general secretory pathway protein E TERM 1955 3813830 - 3813816 - g 78 -11.4 -3.94634 | GAGGATCCCAAACAA GGCGAG CTG CTCGCC CACCTGCGCGCCGAG TERM 1956 3814309 - 3814330 + G 71 -8.6 -4.07687 | TGATCGGCAAGCTCG CGCGCGGC TACAAC GCGGCGCG TTTTGCCGGCACGCT Lcho_3429 3813513 - 3814730 + | general secretion pathway protein F TERM 1957 3814786 - 3814731 - T 77 -16.1 -2.52543 | gap 1 ACCTGGGTGAAGTGA CACCCGCCCGGCCGCTCGAAGGCCGA CCGGC CCGGCCTT-GACCGGGCCGGCCGGTG CCCCGGTCAGCGGAC Lcho_3430 3831634 - 3814793 - | filamentous haemagglutinin outer membrane protein TERM 1958 3819451 - 3819500 + g 70 -13.5 -3.21416 | overlap 3819445 CCACCAGCCCGGCGA GGCTTGCGCCGGCCGTGTTGACG GTCG CGTTGACACCGCCGTCGTAGACC TTGCTGCTGGCCGTC TERM 1959 3820741 - 3820790 + g 70 -13.5 -3.21416 | overlap 3820735 CCACCAGCCCGGCGA GGCTTGCGCCGGCCGTGTTGACG GTCG CGTTGACACCGCCGTCGTAGACC TTGCTGCTGGCCGTC TERM 1960 3821257 - 3821306 + g 70 -13.5 -3.21416 | overlap 3821251 CCACCAGCCCGGCAA GGCTTGCGCCGGCCGTGTTGACG GTCG CGTTGACACCGCCGTCGTAGACC TTGCTGCTGGCCGTC TERM 1961 3822031 - 3822080 + g 70 -13.5 -3.21416 | overlap 3822025 CCACCAGCCCGGCAA GGCTTGCGCCGGCCGTGTTGACG GTCG CGTTGACACCGCCGTCGTAGACC TTGCTGCTGGCCGTC TERM 1962 3823435 - 3823467 + g 71 -16.3 -2.62616 | overlap 3823444 CCTTGCTCGCGGCCA CGCTCAGGCCCGTCA GGG TGACGGTCTTGGGCG TGATGTCGGCCGTGA TERM 1963 3824185 - 3824210 + g 75 -12.5 -3.62046 | opp_overlap 3824167, overlap 3824168 AGCGGCCGGTGCCCG CGTCGATGCCG GTAT CGGCGGCGACG TTGTTGACGAAGTCG TERM 1964 3824440 - 3824493 + g 75 -16 -3.03338 | overlap 3824430 TGGTGTTGCTGCCGG CGTTCAGCGCCACGGAGCCGGTGC CGTCGA GCAGCAGTTGCGTGGCGTTGAGCG TGTTGCCGGCGTTCT TERM 1965 3825637 - 3825689 + g 75 -12.6 -3.63991 | gap 1, overlap 3825604 3825639 3825661 CCTGATCGGCGCTGT CGGGCGCGGTGTTGCTGTCGCTGAC CAGC GTCAGCGCCAGCG-CGCGGCTGCCG TTGTTGCCACTGGTG TERM 1966 3827113 - 3827132 + g 72 -11.4 -3.63515 | gap 1 TCCAGGTGACGGCGC CGGC-GCGC GTG GCGCTGCCG TTGTTCCAGCTCGGG Lcho_3431 3833429 - 3831726 - | polypeptide-transport-associated domain-containing protein Lcho_3432 3833721 - 3834734 + | ATPase central domain-containing protein TERM 1967 3834758 - 3834787 + T 100 -19.3 -3.35813 | opp_overlap 3834739 3834736 GCGGCTCGAATCCCC GCCGGGCCGGC CGTCAGAT GCCGGCCCGGC TTCATTCCGGTGCAC Lcho_3433 3835544 - 3834789 - | Crp/FNR family transcriptional regulator TERM 1968 3835014 - 3834998 - G 71 -15.1 -3.02144 | opp_overlap 3834989 3835009 GCACCGGGTGGAACA GCGCGGC CAG GCCGCGC GCCACCTTGGTGTCG TERM 1969 3836133 - 3836091 - g 70 -12.6 -3.33315 | opp_overlap 3836091 3836093 GGAACAGGTCGACAA GATGCTCGAGATCCGCGAGC ACT GCCCGCAGCTCGCGCACATC TGGTTCGACGATCCG TERM 1970 3837042 - 3837024 - g 82 -13.8 -3.85864 | overlap 3836993 GGAGTACTACAAGAA CCCGGCCG CCA CGGCCGAG GTGCTCAACGCCGAG Lcho_3434 3835738 - 3837684 + | AMP-dependent synthetase and ligase TERM 1971 3838299 - 3838259 - g 76 -15.6 -3.14344 | gap 1 GATGGCCGGCATGAA CGTCGAGGA-GAAGCAGGA CATG TGCCGCTTCATCCTCGACG TCAACGACGAGTTCG Lcho_3435 3837681 - 3838475 + | ABC transporter-related protein Lcho_3436 3838575 - 3839504 + | inner-membrane translocator Lcho_3437 3839523 - 3840587 + | inner-membrane translocator Lcho_3438 3840714 - 3842045 + | hypothetical protein Lcho_3439 3842130 - 3842942 + | ABC transporter-related protein Lcho_3440 3843000 - 3843299 + | hypothetical protein Lcho_3441 3843292 - 3844554 + | putative phenylacetate-CoA ligase Lcho_3442 3844669 - 3845643 + | hypothetical protein TERM 1972 3845715 - 3845738 + F 100 -18.2 -5.80817 | opp_overlap 3845715 CTCGAATCGGCAAAA GCGGCACACC GTCG GGTGTGCCGC TTTTTTTATGTTCGG TERM 1973 3845738 - 3845715 - f 100 -18.2 -4.14392 | opp_overlap 3845715 CTCGAATCGGCAAAA GCGGCACACC GTCG GGTGTGCCGC TTTTTTTATGTTCGG TERM 1974 3846441 - 3846402 - g 75 -14.2 -3.54459 | TCAACCGCGGCGAAA TCGATGTCGCGCTGGCCG CCGA CGGCCAGCCCAGCAGCGA CAGCAACACGCTCGA Lcho_3443 3845900 - 3846541 + | two component transcriptional regulator Lcho_3444 3846534 - 3847928 + | histidine kinase Lcho_3445 3849184 - 3847943 - | tyrosyl-tRNA synthetase TERM 1975 3849405 - 3849383 - g 81 -17.8 -3.02461 | overlap 3849385 GAATTTCGGTGAACA CACGCGCCAT TGG ATGGCGCGTG CAGAACTGGCGCTAC TERM 1976 3849403 - 3849385 - g 71 -14.6 -3.06815 | overlap 3849383 ATTTCGGTGAACACA CGCGCCAT TGG ATGGCGCG TGCAGAACTGGCGCT Lcho_3446 3849360 - 3850754 + | peptidase M23B TERM 1977 3851861 - 3851822 - g 70 -13.4 -3.28924 | gap 1, overlap 3851806 CACCTGCGCCGACAA GCGGCCAGCGAGCCGGCGG TGA CCGGCG-CCCGGGGGCCGC GCATCCTGGGCTGCT Lcho_3447 3850796 - 3851893 + | hypothetical protein TERM 1978 3851954 - 3851929 - T 100 -17.7 -4.54047 | opp_overlap 3851934, overlap 3851934 GCATTGCAGACAAAA GAAAAGCCGCC CGAG GGCGGCTTTTC TGCAAGCGTGACGAT TERM 1979 3851934 - 3851949 + T 95 -11.8 -4.3739 | opp_overlap 3851929 3851934 GCAGACAAAAGAAAA GCCGCC CGAG GGCGGC TTTTCTGCAAGCGTG TERM 1980 3851949 - 3851934 - T 100 -11.8 -5.23292 | opp_overlap 3851934, overlap 3851929 GCAGACAAAAGAAAA GCCGCC CGAG GGCGGC TTTTCTGCAAGCGTG Lcho_3448 3852338 - 3851973 - | iron-sulfur cluster assembly accessory protein Lcho_3449 3852836 - 3852414 - | hypothetical protein Lcho_3450 3853633 - 3852920 - | hypothetical protein TERM 1981 3853751 - 3853700 - R 80 -12.5 -3.75153 | gap 3, opp_overlap 3853715, overlap 3853711 3853715 GTCGCCGAATTGAAA CGCAC-CATAC-A-CGAAGGGCCACC GAT GGTGGCCCTTCGATCGCAGGCGTACG CAACAAGGCGCGCCA TERM 1982 3853737 - 3853711 - R 100 -22.4 -2.96984 | opp_overlap 3853715, overlap 3853700 3853715 GAAACGCACCATACA CGAAGGGCCACC GAT GGTGGCCCTTCG ATCGCAGGCGTACGC TERM 1983 3853715 - 3853733 + r 82 -16 -3.05463 | opp_overlap 3853711 3853700 3853715 CGCACCATACACGAA GGGCCACC GAT GGTGGCCC TTCGATCGCAGGCGT TERM 1984 3853733 - 3853715 - R 88 -16 -3.3382 | opp_overlap 3853715, overlap 3853711 3853700 CGCACCATACACGAA GGGCCACC GAT GGTGGCCC TTCGATCGCAGGCGT Lcho_3451 3854206 - 3853814 - | ribosomal protein S9 Lcho_3452 3854644 - 3854216 - | ribosomal protein L13 TERM 1985 3854840 - 3854806 - R 100 -14.3 -4.323 | gap 1, overlap 3854778 GCCAAAGACGGAAAA GCCCGCGAGTATAGCG CGAG CGCCGTAC-CGCGGGC CATGGCATGCGAACG Lcho_3453 3856046 - 3854895 - | basic membrane lipoprotein TERM 1986 3855102 - 3855126 + g 73 -7.1 -4.4078 | overlap 3855103 GGCCGGCACCTTGTC GGAGATCGACA CGA TGTCGATCGCG TTTTCCTTCACGCCC TERM 1987 3856118 - 3856088 - R 75 -14.6 -2.71364 | TCAGGCGGTGAATTA TGGCGGCGGCACCG ACC CGGTACCGCCTCCT GCAGATCAGAAATGA Lcho_3454 3856948 - 3856124 - | hypothetical protein TERM 1988 3856414 - 3856366 - G 87 -20.5 -3.06009 | gap 2, opp_overlap 3856403 3856404 CAAAACCCTTGAACA CGGCCGGCGTGCCGGCCTGGAAC GGGAA GTTCCAGACCG-CA-GCCAGCCG GGCCGTGCCGTCGAA Lcho_3455 3858016 - 3857096 - | inner-membrane translocator TERM 1989 3857658 - 3857674 + g 82 -4.4 -4.76041 | gap 1, opp_overlap 3857658, overlap 3857661 AGCGGCACCTCGAAA CTCGGCC GCTG GGCC-AG TTTTTCCTGCGTGTA Lcho_3456 3859120 - 3858035 - | inner-membrane translocator Lcho_3457 3860666 - 3859107 - | ABC transporter-related protein Lcho_3458 3862029 - 3860725 - | guanine deaminase Lcho_3459 3863003 - 3862026 - | LysR family transcriptional regulator Lcho_3460 3863110 - 3864702 + | xanthine dehydrogenase, small subunit TERM 1990 3866293 - 3866274 - g 73 -10 -3.9534 | overlap 3866275 3866284 ACCGACACGCAGAAA GTGGCCAA CACC TCGGCCAC CGCGGCGTCGACCGG Lcho_3461 3864699 - 3867062 + | xanthine dehydrogenase, molybdopterin binding subunit Lcho_3462 3867076 - 3867912 + | xanthine dehydrogenase accessory protein XdhC Lcho_3463 3871950 - 3867949 - | multi-sensor hybrid histidine kinase Lcho_3464 3874105 - 3871991 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 1991 3872342 - 3872322 - G 76 -3.9 -4.65895 | opp_overlap 3872328, overlap 3872323 3872326 TCGTCGAGCGAAAAA CCCACGC CGTGGTC GCGCAGG CGGTGCATGCGCGCG TERM 1992 3873240 - 3873189 - G 72 -12.2 -3.58343 | gap 1, overlap 3873190 TTGACGAGCTTGAAA TGGTCCAGGTCGACCAGGCACAGCG TGG CGCTGC-CCTGGCCGAGCTGGTCGC CGACCAGGCTGAAGC TERM 1993 3873239 - 3873190 - G 72 -15.7 -2.74792 | gap 1, overlap 3873189 TGACGAGCTTGAAAT GGTCCAGGTCGACCAGGCACAGCG TGG CGCTGC-CCTGGCCGAGCTGGTCG CCGACCAGGCTGAAG Lcho_3465 3874533 - 3877607 + | hypothetical protein TERM 1994 3877891 - 3877857 - f 95 -10.7 -4.82901 | gap 2, overlap 3877858 TGGCCGCTAGAAAAA GTCCGGC-CCC-GCCGG CGA CCGGCAAGGCGCCGGAT CGACAGGGCGCCAAG TERM 1995 3877890 - 3877858 - f 81 -14.2 -3.49419 | gap 2, overlap 3877857 GGCCGCTAGAAAAAG TCCGGC-CCC-GCCGG CGA CCGGCAAGGCGCCGGA TCGACAGGGCGCCAA TERM 1996 3881480 - 3881426 - g 76 -17 -2.71483 | opp_overlap 3881435 3881437 3881440, overlap 3881414 3881412 AGATCGGCTGAACCA GGCGATGGCCATCAGCGCGCGCTCGC AGC GCGAGGGCGCGCTGCTCTTCATCGAC CTCGACCACTTCAAG TERM 1997 3881435 - 3881471 + G 76 -16.5 -3.15544 | opp_overlap 3881426, overlap 3881437 3881440 GAACCAGGCGATGGC CATCAGCGCGCGCTCGC AGC GCGAGGGCGCGCTGCTC TTCATCGACCTCGAC TERM 1998 3881437 - 3881469 + G 86 -19.1 -3.14051 | opp_overlap 3881426, overlap 3881435 3881440 ACCAGGCGATGGCCA TCAGCGCGCGCTCGC AGC GCGAGGGCGCGCTGC TCTTCATCGACCTCG TERM 1999 3881440 - 3881466 + G 84 -19.4 -2.77523 | opp_overlap 3881426, overlap 3881437 3881435 AGGCGATGGCCATCA GCGCGCGCTCGC AGC GCGAGGGCGCGC TGCTCTTCATCGACC Lcho_3468 3880425 - 3882662 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 2000 3882851 - 3882865 + F 83 -5.6 -4.88067 | overlap 3882832 GAGGCCAGTTAACTT GGCTTG CCT CCAGCC TTTTTGTGGGTAACT Lcho_3469 3882930 - 3884231 + | integrase family protein Lcho_3470 3884339 - 3884662 + | hypothetical protein TERM 2001 3884964 - 3884949 - g 77 -4.6 -4.62069 | overlap 3884952 CTTCCATCGGAAAAA GAGCGA AGCG CCGCCC GCTTGTTGGCCGTGG Lcho_3471 3884763 - 3885878 + | hypothetical protein Lcho_3472 3886077 - 3886301 + | hypothetical protein TERM 2002 3886365 - 3886337 - g 79 -13.8 -3.68359 | overlap 3886331 3886356 3886357 CCCTGAAAACGACAA GGGCCGGCACCC TGGAC AAGCGCCGGCCC CCATGCAGACCGGCG Lcho_3473 3886311 - 3886694 + | hypothetical protein TERM 2003 3886888 - 3886920 + F 74 -10.6 -3.69663 | gap 2 TCAACATCTGCCACT CCACCCCGTGCCGTGT GAA AC-CGGC-CGGTGTGG TTCTTCGATGCTCAT Lcho_3474 3887132 - 3887377 + | hypothetical protein Lcho_3475 3887379 - 3887945 + | hypothetical protein Lcho_3476 3887942 - 3888928 + | hypothetical protein Lcho_3477 3888921 - 3890816 + | hypothetical protein TERM 2004 3891155 - 3891135 - f 79 -6.2 -4.64766 | gap 1, overlap 3891137 GTCACACCGCAAAAA GCGTGCATC TGCA GATGCA-GC AGACCGCACCAGCAC Lcho_3478 3891202 - 3891324 + | hypothetical protein Lcho_3479 3891389 - 3892066 + | hypothetical protein Lcho_3480 3892256 - 3892387 + | hypothetical protein TERM 2005 3893146 - 3893123 - T 80 -13.9 -3.41978 | opp_overlap 3893123 TCACAATCGAATCAA GGGCTTGGC TTCTCG GCCAAGCCC TTTGCACTTGCGCCG TERM 2006 3893123 - 3893146 + T 87 -14.6 -3.66178 | opp_overlap 3893123 TCACAATCGAATCAA GGGCTTGGCT TCTC GGCCAAGCCC TTTGCACTTGCGCCG TERM 2007 3893156 - 3893189 + T 100 -21.7 -3.35073 | gap 1, overlap 3893157 3893159 AAGCCCTTTGCACTT GCG-CCGGGGCGGCCG TAT CGGCCGCCCCGGTCGG TTCATTCAGGCTGCT TERM 2008 3893157 - 3893188 + T 100 -25.2 -2.60723 | gap 1, overlap 3893156 3893159 AGCCCTTTGCACTTG CG-CCGGGGCGGCCG TAT CGGCCGCCCCGGTCG GTTCATTCAGGCTGC TERM 2009 3893159 - 3893185 + T 100 -26.6 -2.60244 | overlap 3893157 3893156 CCCTTTGCACTTGCG CCGGGGCGGCCG TAT CGGCCGCCCCGG TCGGTTCATTCAGGC Lcho_3483 3894246 - 3893191 - | hypothetical protein TERM 2010 3893532 - 3893579 + g 75 -16.2 -3.02511 | overlap 3893527 3893527 CCAGCACCACGCCTC GCGCCTGGCTGTCGCGGGCCTT CTGG AACGACTGCGCCAGCCAGGCGA TGTTGGCGGCGTCGC TERM 2011 3894047 - 3894069 + g 73 -6.9 -4.35483 | overlap 3894048 ATGTCGGAGCGGTTG ATGCTGGCC AGCAC GGCCGGCAG TTTCTTGTCGTCGCC TERM 2012 3894308 - 3894269 - R 93 -18.6 -3.75153 | overlap 3894270 TCCTTCGAAGGCAAA GCGGCCCGCGGTGATCGA CGCA TCGATCAGCGCAGGCCGG TGCTGCAATACCCGG TERM 2013 3894307 - 3894270 - R 100 -22.1 -2.84878 | overlap 3894269 CCTTCGAAGGCAAAG CGGCCCGCGGTGATCGA CGCA TCGATCAGCGCAGGCCG GTGCTGCAATACCCG TERM 2014 3894377 - 3894360 - R 74 -12.7 -3.29144 | GTACCGCTTGGACAA GGTCGGC GCGA GCCGACC GATCAGAACGAGTAG TERM 2015 3894399 - 3894419 + r 71 -13.9 -2.70932 | opp_overlap 3894389 3894386 AACGAGTAGCGCACG CCCGCGCCC AGG GCGCGCGGG TCCTTGCCGGCGACG Lcho_3484 3895453 - 3894380 - | porin TERM 2016 3895665 - 3895643 - R 100 -15.6 -5.1675 | opp_overlap 3895643 GCAGGCATGAAAAAA GGGTCTGGCA ATT CGCCAGACCC TTTTTGATGGTGCAG TERM 2017 3895643 - 3895665 + r 100 -14.9 -4.77036 | opp_overlap 3895643 GCAGGCATGAAAAAA GGGTCTGGC AATTC GCCAGACCC TTTTTGATGGTGCAG Lcho_3485 3897437 - 3895716 - | methyl-accepting chemotaxis sensory transducer Lcho_3486 3898300 - 3897635 - | CBS domain-containing protein Lcho_3487 3899380 - 3898355 - | heat-inducible transcription repressor HrcA TERM 2018 3899868 - 3899852 - g 70 -2.1 -4.49316 | overlap 3899853 3899854 ACTACGAAGAAGAAA CCCGCGC CAT GCTCGAA GGCCACGTGCTGCGC TERM 2019 3900241 - 3900275 + G 82 -14.3 -3.76224 | gap 1 CTGCTGCACGGCGAC CGCATCAGCGTGCGCC GCTC GGCGCAC-CGGGTGCG TTTCCTGCATCCGCC Lcho_3488 3899449 - 3900369 + | ATP-NAD/AcoX kinase TERM 2020 3900735 - 3900704 - g 80 -16.6 -3.14132 | gap 1 CCGCGCCTGGATCAA CG-GCAGCAGCGCCA CGG TGGCGCAGCTGCGCG AGCTGGGCGAGCAGC Lcho_3489 3900384 - 3902087 + | DNA repair protein RecN Lcho_3490 3902114 - 3903070 + | hypothetical protein Lcho_3491 3903070 - 3903699 + | peptidase S16 lon domain-containing protein Lcho_3492 3904870 - 3903716 - | A/G-specific adenine glycosylase Lcho_3493 3906996 - 3904867 - | hypothetical protein TERM 2021 3905497 - 3905529 + g 75 -10.5 -3.88291 | opp_overlap 3905497, overlap 3905498 GAGGCGGGTGAACGA GGCGGCCAGCATGTC GCG GATGTCCTGGCCGCG TTTCTGCGCCTCGTC Lcho_3494 3907919 - 3907089 - | formamidopyrimidine-DNA glycosylase TERM 2022 3908203 - 3908185 - g 75 -12.4 -3.63515 | opp_overlap 3908182 GGCCACCGTGAACAA CTCGGCGC TCG ACGCCGAG ACGTTCTACCAGCTC Lcho_3495 3907994 - 3909856 + | tetratricopeptide TPR_4 TERM 2023 3909927 - 3909876 - g 70 -14.3 -3.14211 | gap 1, overlap 3909918 ACCGGGCTCGATCAA CCGGG-AAGCACCGGCGCGGCCGA TCCGG TCGGCAGCGCAGAAGCTGGCCCGG GCCACCCTGCTGGCG TERM 2024 3910312 - 3910332 + G 87 -18.3 -3.54424 | GCCCACAGCCCGCTG GCCGACGCG GGT CGCGTCGGC TTTCGCCAGCTGGGC Lcho_3496 3909853 - 3910449 + | hypothetical protein TERM 2025 3911175 - 3911135 - g 81 -9 -4.56597 | gap 1 GTCGTTTGGCAAAAA TGATTTGCAGCGCAGCGCG CAAG CGCACAGCGCCG-AAGTCA GCCAAGCACTGAGCT Lcho_3497 3910512 - 3911387 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 2026 3911517 - 3911548 + F 100 -14.4 -5.21709 | gap 1, overlap 3911519 CTGCCAAATCATCTG AAGGCGCC-CGCTGG CTT CCGGCGAGGCGCCTG TTTTTTGATCTCACG TERM 2027 3911519 - 3911546 + F 100 -17 -4.23988 | gap 1, overlap 3911517 GCCAAATCATCTGAA GGCGCC-CGCTGG CTT CCGGCGAGGCGCC TGTTTTTTGATCTCA Lcho_3498 3911601 - 3912563 + | ribose-phosphate pyrophosphokinase Lcho_3499 3912631 - 3913257 + | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 2028 3913299 - 3913316 + F 100 -14.1 -4.39571 | opp_overlap 3913299 ACCGGTTCGAACCCA GCCCCGC CCGC GCGGGGC TTTTCACTTTCTGGG TERM 2029 3913316 - 3913299 - f 70 -14.1 -2.52543 | opp_overlap 3913299 ACCGGTTCGAACCCA GCCCCGC CCGC GCGGGGC TTTTCACTTTCTGGG Lcho_3500 3913391 - 3914032 + | aminoacyl-tRNA hydrolase Lcho_3501 3914314 - 3914042 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Lcho_3502 3914864 - 3914364 - | pantetheine-phosphate adenylyltransferase Lcho_3503 3915542 - 3914880 - | methyltransferase TERM 2030 3915166 - 3915115 - G 95 -12.2 -4.67755 | gap 1, opp_overlap 3915131 3915132 3915135, overlap 3915104 3915117 AGATCGAGCGAAAAA GGCGGGTCGAGCAGGATGAGGTCGA AGC TCG-CCTCCTTCTGCTCGCCCATCC AGGCCAGCGCATCGG TERM 2031 3915598 - 3915579 - H 81 -11.4 -4.07568 | gap 1 CGCCGCCCCCGAAAA CCGCG-CCG CAG CGGTCGCGG CGCCACGAGGCGCAC TERM 2032 3915932 - 3915967 + G 78 -12 -3.96148 | GACCTGGAAGCCGCG CTGC-TGGTCGCCGAC GCCGGG GTCGGCG-CCACGCAG TTTCTGCTCAACGAC Lcho_3504 3915698 - 3916738 + | signal recognition particle-docking protein FtsY TERM 2033 3916782 - 3916740 - T 72 -13.2 -3.17075 | overlap 3916743 CCTTGCTGAACTGAA TCAGGCGGCGACCGCGACCG GCG CGGGCACGGCCGCCTGCTGC CGGCCGATCCAGCCG Lcho_3505 3919235 - 3916740 - | secretion ATPase Lcho_3506 3920733 - 3919246 - | hypothetical protein Lcho_3507 3921718 - 3920801 - | putative exopolysaccharide biosynthesis protein Lcho_3508 3923290 - 3921737 - | polysaccharide chain length determinant protein Lcho_3509 3924055 - 3923414 - | polysaccharide export protein TERM 2034 3924256 - 3924223 - R 100 -26.1 -2.90496 | overlap 3924226 GTGCCCCTGAAACGA CAACGGCGCACGGGC CTGA GCCCGTGCGCCGTCG ACCGAGGATGGAAAA TERM 2035 3924253 - 3924226 - R 100 -24.2 -3.60151 | overlap 3924223 CCCCTGAAACGACAA CGGCGCACGGGC CTGA GCCCGTGCGCCG TCGACCGAGGATGGA Lcho_3510 3925688 - 3924279 - | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Lcho_3511 3925814 - 3925701 - | hypothetical protein Lcho_3512 3926695 - 3925964 - | ubiquinone/menaquinone biosynthesis methyltransferase Lcho_3513 3927176 - 3926769 - | hypothetical protein Lcho_3514 3927997 - 3927254 - | phosphoglycerate mutase 1 family protein Lcho_3515 3928069 - 3928491 + | rhodanese domain-containing protein Lcho_3516 3928625 - 3928867 + | glutaredoxin 3 Lcho_3517 3929012 - 3930898 + | K potassium transporter Lcho_3518 3931514 - 3930909 - | hypothetical protein TERM 2036 3931019 - 3930966 - G 75 -15.2 -3.28924 | gap 1, opp_overlap 3931014, overlap 3930935 CAGCGTGCCCCAGAA CACGCCGCCGGCGTGCGCCAGCGGG GCGAT CGCGATGTCCCA-GCCGGCGACGTG GATCAGCGGCCCGGC TERM 2037 3931598 - 3931549 - R 79 -15 -3.02511 | gap 3, opp_overlap 3931587 TTCAGGCGCCGAAGA CGGCCCGCCAGAGCGCCAGCACGGC TTC GCGGTGC-GCCGC-C-AGCGGGCCG AGTTCGGCCAGGTCG Lcho_3519 3934327 - 3931535 - | (glutamate--ammonia-ligase) adenylyltransferase TERM 2038 3932793 - 3932769 - G 70 -9.3 -3.74872 | gap 1, opp_overlap 3932787, overlap 3932770 3932773 ACCCAGTCGATGAAA CGCAGCAGCG CCTCGT CGC-GCTGCG CCGGCGTCAGCGTGG TERM 2039 3934133 - 3934166 + g 71 -14.5 -3.12327 | gap 1, overlap 3934130 3934135 CAAGGCCGCCGGCAC GCCGC-GGCCGCGCTG CAG CAGCACGGCCAGCGTC TGTTCGATCTCGGCG TERM 2040 3934135 - 3934164 + g 75 -15.7 -3.12142 | gap 1, overlap 3934133 3934130 AGGCCGCCGGCACGC CGC-GGCCGCGCTG CAG CAGCACGGCCAGCG TCTGTTCGATCTCGG TERM 2041 3935904 - 3935958 + G 93 -19.4 -3.55548 | gap 3 CGATCTGCGCTTTCG CGCCAGCCAGGCCGGCGGCG-AGGCCG AGCT CGACATGCGC-GCCGGC-TGGCTGGCG TTTCCGGGCCTGTTC Lcho_3520 3934432 - 3938784 + | putative transmembrane protein Lcho_3521 3938819 - 3939637 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Lcho_3522 3940951 - 3939695 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase Lcho_3523 3943174 - 3941057 - | primosomal protein N' TERM 2042 3942748 - 3942778 + g 76 -11.9 -3.86194 | gap 2 CGTACGCGGGCACAT CGACCTGGCCGATCG GCT CGG-CGGCCAGG-CG TTTGTGCAGGCGCTT TERM 2043 3943455 - 3943428 - R 70 -14.2 -2.52896 | GGATGTGCGAATGCA GCATGCACCGCT TCAA AACGGTGCACGC CGACATTGGGGACAA TERM 2044 3943498 - 3943510 + r 71 -7.7 -4.08216 | opp_overlap 3943498 3943497 GGGGCTGAAAACAAT GCTGT TTC ACAGC TTTTCAGCCCGCTCC Lcho_3524 3944606 - 3943536 - | uroporphyrinogen decarboxylase TERM 2045 3944664 - 3944647 - R 100 -14.1 -4.37711 | opp_overlap 3944647 GTAGGAAATGGAAAA CGCCCGC GGCT GCGGGCG TCTGCTTGCGGTCGG TERM 2046 3944647 - 3944664 + r 73 -14.1 -2.91274 | opp_overlap 3944647 GTAGGAAATGGAAAA CGCCCGC GGCT GCGGGCG TCTGCTTGCGGTCGG Lcho_3525 3945093 - 3944716 - | ATP synthase F1, epsilon subunit TERM 2047 3944758 - 3944809 + g 88 -10.1 -4.74132 | overlap 3944760 GGCGATCTGCGCGGC CATCG-CGGCGAACTCGCCCTGAGC CTTG GC-CAGGTCGAGATCGCTGGCGGCG TTTTTCATGGCCTCT TERM 2048 3944934 - 3944962 + g 70 -13.2 -3.29144 | opp_overlap 3944944 CTTCCAGGATGCCGC CGGCGACGAAGA CGAAC TCTTCCTCGCCG TTGTCAGCCCGCTCG TERM 2049 3945212 - 3945174 - R 84 -14.5 -3.40073 | opp_overlap 3945170 AGGGGCAGGAAGCAA GCAGACGGGTGTCAGGC TAGGC GCCTGCCGCCCGTATGC GCCGCTTACTGCATC Lcho_3526 3946642 - 3945218 - | ATP synthase F1, beta subunit TERM 2050 3946800 - 3946784 - R 70 -13.7 -2.56596 | opp_overlap 3946781 3946780 3946798, overlap 3946780 TGCGCGATCAACCCA CAGCGGC GGC GCCGCTG ACGATTTCCGACAGT Lcho_3527 3947657 - 3946776 - | ATP synthase F1, gamma subunit Lcho_3528 3949229 - 3947691 - | ATP synthase F1, alpha subunit TERM 2051 3948937 - 3948989 + g 73 -14.2 -3.36273 | overlap 3948980 AGCTCGGGGCCGACC GGCACTTCCAGGATGCGGC-CGGTGC AAC GCACCGTGTCGCCTTC-GGAGATGCC TTCGTATTCGCCCAG Lcho_3529 3949869 - 3949336 - | ATP synthase F1, delta subunit Lcho_3530 3950342 - 3949872 - | ATP synthase F0, B subunit Lcho_3531 3950641 - 3950393 - | ATP synthase F0, C subunit Lcho_3532 3951609 - 3950713 - | ATP synthase F0, A subunit Lcho_3533 3952126 - 3951632 - | putative ATP synthase protein I AtpI Lcho_3534 3953262 - 3952363 - | SMP-30/gluconolaconase/LRE domain-containing protein Lcho_3535 3953884 - 3953390 - | GCN5-related N-acetyltransferase Lcho_3536 3954568 - 3953909 - | cytochrome B561 Lcho_3537 3954826 - 3955278 + | cytochrome c prime TERM 2052 3955328 - 3955280 - T 76 -13.8 -3.13343 | opp_overlap 3955283 ACCGCAAGGACTGAA CGCCACG-AGCGCCGGCTCGCCCG CAG CGGGTGAGC-GGCGCTTCGGGTCA TGTGCCCACGCGCGA TERM 2053 3955283 - 3955325 + T 86 -18.5 -2.62184 | opp_overlap 3955280 GCAAGGACTGAACGC CACG-AGCGCCGGCTCGCCCG CAG CGGGTGAGC-GGCGCTTCGGG TCATGTGCCCACGCG TERM 2054 3955362 - 3955374 + T 71 -9.1 -3.72695 | opp_overlap 3955349, overlap 3955346 3955344 GAGGCCTGCCTTTGC GCAGG CCT CCTGC TTTCGTGGCGCAGCT Lcho_3538 3956239 - 3955388 - | PhzF family phenazine biosynthesis protein Lcho_3539 3957480 - 3956257 - | GntR family transcriptional regulator TERM 2055 3957009 - 3956965 - G 85 -15 -3.82824 | overlap 3956966 CAGCACGTAGAAGAA CCGGCAGCCCGGCGCC-AGCCG CGG CAGCTCGGCGACGGCCTG-CGG CAGCGGGCCGGACTC TERM 2056 3957009 - 3956966 - G 70 -15.2 -2.89212 | gap 1, overlap 3956965 AGCACGTAGAAGAAC CGGCAGCCCGGCGCC-AGCCG CGG CAGCTCGGCGACGGCCTGCGG CAGCGGGCCGGACTC Lcho_3540 3958470 - 3957544 - | hypothetical protein Lcho_3541 3959077 - 3958481 - | hypothetical protein TERM 2057 3959185 - 3959203 + r 71 -13.1 -3.01924 | opp_overlap 3959185 CCGGCGCAATGAAAA CGCCGGC ACGAG GCCGGCG TGTTGACGGAGGATG TERM 2058 3959203 - 3959185 - R 95 -13.1 -4.4078 | opp_overlap 3959185 CCGGCGCAATGAAAA CGCCGGC ACGAG GCCGGCG TGTTGACGGAGGATG Lcho_3542 3960167 - 3959226 - | RNA polymerase, sigma 32 subunit, RpoH Lcho_3543 3960444 - 3965255 + | multi-sensor hybrid histidine kinase Lcho_3544 3965252 - 3966220 + | response regulator receiver modulated diguanylate cyclase Lcho_3545 3968056 - 3966245 - | diguanylate cyclase/phosphodiesterase Lcho_3546 3969400 - 3968084 - | diguanylate cyclase with PAS/PAC sensor TERM 2059 3968573 - 3968540 - G 72 -3.6 -4.56597 | overlap 3968543 3968544 TGCGGCCTCGAAAAA CGACCGCCGGTTGG CGATGC CCGTCAGGTGGTCG CAGTCGTTGGCCTGG TERM 2060 3968674 - 3968645 - G 75 -16.3 -3.12482 | opp_overlap 3968660, overlap 3968643 CAAGACCAGGCAATA GGCCGGCTCGTCG GTGT CGCCGGGCCGGCC TGCAGAGGCTGGCAC Lcho_3547 3969802 - 3969410 - | photoactive yellow protein Lcho_3548 3970849 - 3969887 - | cation diffusion facilitator family transporter Lcho_3549 3971324 - 3970962 - | translation initiation factor SUI1 Lcho_3550 3972286 - 3971450 - | redoxin domain-containing protein Lcho_3551 3973017 - 3972349 - | hypothetical protein TERM 2061 3972565 - 3972579 + g 79 -5.7 -4.65895 | CAGCACCACGACATC GGTCT TGGCC AGACC TTTTTCGCTCAGGCG Lcho_3552 3973731 - 3973120 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 2062 3973283 - 3973258 - G 76 -11.7 -3.82191 | GCAAGGGCAGAAGAA GCCGCCCGGCC AGTC GGCCGGCAGGC TCGGGTTGGCAGTGC Lcho_3553 3974001 - 3975326 + | putative sigma54 specific transcriptional regulator Lcho_3554 3975365 - 3975766 + | invasion gene expression up-regulator SirB Lcho_3555 3975814 - 3976296 + | water stress/hypersensitive response domain-containing protein Lcho_3556 3976890 - 3976318 - | hypothetical protein TERM 2063 3976867 - 3976831 - G 79 -12.9 -3.74693 | TGGCACCGGAGCAAA CACCGCGACGCCGGCCA TGG CGGCCAGCATCAGGGCG CCGAGCTTGAGGGCA Lcho_3557 3978203 - 3976926 - | hypothetical protein TERM 2064 3977469 - 3977430 - G 70 -12.8 -3.35679 | opp_overlap 3977431 GCGCTGCACCGAGAA CACCGCCGCGCGGCTC TTGAGCCC GACCAGCACGGCGGTG ACGTTGCGCGGCGTC Lcho_3558 3978931 - 3978200 - | ABC transporter-related protein Lcho_3559 3979485 - 3978919 - | ABC-type metal ion transport system, periplasmic component/surface adhesin TERM 2065 3979578 - 3979614 + r 86 -13.6 -3.68988 | gap 1, overlap 3979569 TCAGTTGCGCGGGGC CGGCGCGGCGCCGAGCG CACT CGC-CAGCGTCGCGACG TTGTGTTCCATCAGC Lcho_3560 3980486 - 3979563 - | periplasmic solute binding protein Lcho_3561 3981373 - 3980486 - | ABC-3 protein TERM 2066 3980837 - 3980816 - G 70 -13.7 -3.23692 | CACCAGCACCAGCAA CAGGCCGTG CACC CACGGCCCG GCGGCGCTGACGCTG Lcho_3562 3982154 - 3981420 - | ABC transporter-related protein Lcho_3563 3982246 - 3982151 - | hypothetical protein Lcho_3564 3982656 - 3982243 - | ferric uptake regulator family protein TERM 2067 3982834 - 3982817 - R 80 -14.1 -3.32844 | GCCCGGATGGCAGAA CGGCGCC GAGC GGCGCCG CGGGTCAGAGCATCT Lcho_3565 3983516 - 3982839 - | 17 kDa surface antigen Lcho_3566 3983828 - 3984223 + | histone family protein DNA-binding protein Lcho_3567 3985262 - 3984267 - | hypothetical protein Lcho_3568 3987381 - 3985333 - | phenylacetic acid degradation protein paaN TERM 2068 3986055 - 3986072 + g 76 -8.3 -4.25104 | CGACCGGGATCACGC GCGCGGC AATG GCCGGGC TTTTCGTCACCAGCG Lcho_3569 3988501 - 3987413 - | phenylacetate-CoA oxygenase/reductase, PaaK subunit Lcho_3570 3988614 - 3988498 - | hypothetical protein Lcho_3571 3989174 - 3988623 - | phenylacetate-CoA oxygenase, PaaJ subunit Lcho_3572 3989962 - 3989171 - | phenylacetate-CoA oxygenase, PaaI subunit Lcho_3573 3990273 - 3989971 - | phenylacetate-CoA oxygenase, PaaH subunit Lcho_3574 3991326 - 3990298 - | phenylacetate-CoA oxygenase, PaaG subunit Lcho_3575 3991486 - 3992493 + | basic membrane lipoprotein TERM 2069 3992575 - 3992529 - g 70 -13.7 -3.14881 | gap 2 GAATGTCGGTACGAA GGGACACCGGACCGAGCGCCGGG CCG CCCCAAGC-CGGTCCGG-ATCCC CTCGGGGGATCGGCC TERM 2070 3993245 - 3993205 - g 86 -18.2 -3.37796 | CTTCATCAGCCACAA GCTCGGCGAGGTGCTGCG GGTGT CGCAGCGCATCGCCGTGC TGCGCGCGGGCAAGC Lcho_3576 3992516 - 3994168 + | ABC transporter-related protein Lcho_3577 3994179 - 3995261 + | inner-membrane translocator Lcho_3578 3995258 - 3996181 + | inner-membrane translocator Lcho_3579 3996217 - 3997113 + | hypothetical protein Lcho_3580 3997124 - 3997918 + | molybdopterin binding domain-containing protein TERM 2071 3997951 - 3997932 - f 81 -9.3 -4.23723 | opp_overlap 3997932 3997930, overlap 3997922 3997945 3997946 GAAGACGATCCAAAA TGGTGCG AACAAA CGCACCA TGTTTGTGCAATTTC TERM 2072 3999317 - 3999286 - g 71 -6.4 -4.17048 | CGGCGTGGAAAACAA GATCCATCCGGGCG AGCC CGCCTCGAAGGACC TGTACCACCTGCCGC Lcho_3581 3998123 - 3999538 + | glutamine synthetase, type I TERM 2073 3999585 - 3999602 + F 100 -12.7 -4.8622 | opp_overlap 3999585 CGTCGCCCAGCGAAA GACGGCC TGCG GGCCGTC TTTTTCGTTGCGGGG TERM 2074 3999602 - 3999585 - f 81 -12.7 -3.64703 | opp_overlap 3999585 CGTCGCCCAGCGAAA GACGGCC TGCG GGCCGTC TTTTTCGTTGCGGGG Lcho_3582 3999715 - 4000206 + | putative signal peptide protein Lcho_3583 4000203 - 4001276 + | signal transduction histidine kinase, nitrogen specific, NtrB Lcho_3584 4001330 - 4002814 + | nitrogen metabolism transcriptional regulator, NtrC, Fis family Lcho_3585 4003108 - 4003755 + | Crp/FNR family transcriptional regulator Lcho_3586 4004689 - 4003802 - | carboxymethylenebutenolidase Lcho_3587 4004790 - 4004689 - | hypothetical protein Lcho_3588 4005555 - 4004851 - | two component transcriptional regulator Lcho_3589 4007521 - 4005563 - | PAS/PAC sensor hybrid histidine kinase TERM 2075 4007186 - 4007149 - G 75 -16.3 -3.0782 | gap 1, opp_overlap 4007184, overlap 4007159 TAATGTCCGAATACA GCGTGACGAAGCCGATGC CCG GCACCGGCA-CGCCACGC ACCCGCAGCACCTGG TERM 2076 4007244 - 4007294 + g 85 -19 -3.01712 | gap 2 TGCGGGGTGAAGCGG CGTGCCGCGGCCATGCGCTCGGCC ACGTA GGCCG-GCGCGTCGCCGGGGC-CG TATTCGCCGCGCGCG TERM 2077 4007430 - 4007409 - G 70 -10.1 -3.74693 | TTCCAGGCGACGAAA CGCAGATCG CCGT CGATCAGCG TGAAGCCCTGGTCGA Lcho_3590 4007704 - 4009347 + | AMP-dependent synthetase and ligase Lcho_3591 4009358 - 4010110 + | ABC transporter-related protein Lcho_3592 4010107 - 4010826 + | ABC transporter-related protein Lcho_3593 4010876 - 4012087 + | putative ABC transporter substrate binding protein TERM 2078 4012706 - 4012729 + G 72 -12.4 -3.54741 | gap 1, overlap 4012706 GTCACGTTGACCTAC GG-CGCCGGCG TGG CGCTGGCGGCC TTTGCCGGCGTGCTG Lcho_3594 4012103 - 4012987 + | inner-membrane translocator Lcho_3595 4013001 - 4013936 + | inner-membrane translocator TERM 2079 4014395 - 4014414 + G 70 -2.7 -4.57073 | TCGCCCACCACGGCA GCGCAGT ACTCAA GCAGCGC TTTTTGCCCAAGATG TERM 2080 4015256 - 4015226 - g 77 -11 -4.15044 | GCTTCGTCGAAGAAA CCGGCGCGGCGCAA TAC CTGCGCGACGCCCG CATCACGACGATCTA Lcho_3596 4013971 - 4015752 + | acyl-CoA dehydrogenase domain-containing protein Lcho_3597 4015769 - 4016245 + | dehydratase Lcho_3598 4016262 - 4017011 + | electron transfer flavoprotein alpha/beta-subunit Lcho_3599 4017014 - 4017940 + | electron transfer flavoprotein alpha subunit TERM 2081 4019459 - 4019480 + G 70 -9.3 -3.85698 | overlap 4019460 ACAGCGCCTACCTGC TCGGCCACG TCGA CGCGGCCGG TTTCTCGCAGAGCCA Lcho_3600 4018249 - 4019793 + | Ppx/GppA phosphatase TERM 2082 4020877 - 4020915 + G 80 -16.8 -3.14132 | GAGCGCGACATCCTG CTGCATCACCCGTTCGAG TCG TTCGAGCCGGTGGTGCAG TTCCTGCGCGAGGCC Lcho_3601 4019842 - 4021902 + | polyphosphate kinase TERM 2083 4022028 - 4022010 - gT 71 -12.4 -3.19653 | overlap 4022001 CGACAAGGCCATCAA CACGGCCC GGG GGGCCATG AAGGTGATGCGTGCG Lcho_3603 4023680 - 4022493 - | hypothetical protein Lcho_3602 4021969 - 4022556 + | GCN5-related N-acetyltransferase Lcho_3604 4024596 - 4023724 - | phosphatidylserine decarboxylase Lcho_3605 4024661 - 4026310 + | aminotransferase class-III Lcho_3606 4026923 - 4026315 - | hypothetical protein TERM 2084 4026971 - 4026948 - H 70 -11 -3.37344 | CGGTGATGGAATGAA GCACGACCTC GGAC GAGACCGTGC GTGACGCGATGGTGT Lcho_3607 4027092 - 4028333 + | glycosyl transferase group 1 Lcho_3608 4029567 - 4028299 - | major facilitator transporter TERM 2085 4028452 - 4028476 + g 95 -15.7 -4.4078 | opp_overlap 4028451 CAGCGCCGCATAGAC CGCCAGCATGC CCA GCACGCTGGCG TTTTCATTGAAACCC TERM 2086 4029623 - 4029590 - R 84 -17.4 -2.70932 | gap 1 CTTGTGTGCGAACGA TCCGGCCG-CGCGGC CGCCT GCCGCGGCGGCCGGC GCAACATGCCGTCAG Lcho_3609 4031421 - 4029673 - | alkaline phosphatase TERM 2087 4031946 - 4031891 - g 75 -17.4 -2.62184 | gap 1, opp_overlap 4031908, overlap 4031847 CGGTGCTCGACATCA CCCGCCACGCCGGCACGCCCGCGGGCG CCG CGCTCGCGGCCACGCTGGC-TGGCGAC GGCGACGCGCTGCGC TERM 2088 4032302 - 4032269 - g 75 -16.7 -2.62184 | gap 1 TGCGGGCCGACATGA GCGCCGA-CGCCGCGC TGC GCGCGATGGTCGGCGC CTGCCTCGCGCAGAT Lcho_3610 4031614 - 4033110 + | adenylate cyclase Lcho_3611 4035025 - 4033139 - | TRAP C4-dicarboxylate transport system permease DctM subunit TERM 2089 4034570 - 4034535 - G 75 -5.3 -4.56775 | gap 1, overlap 4034537 4034538 AGCCGGCTGGAAAAA CAGCG-GCTGCCGAGC TTGAG GCCCAGCAGCACGAAG CCGACCGGCATCGCC TERM 2090 4034731 - 4034689 - G 71 -15.6 -2.62616 | overlap 4034711 4034713 GCAGGCCGCAGATCA GCGCCGCGCCGCCGTG-GGC AAACA GCCGCACGGCGGC-CTGCAC ACGCGCGCCACCGAG Lcho_3612 4036041 - 4035022 - | TRAP dicarboxylate transporter- DctP subunit Lcho_3613 4037018 - 4036077 - | hypothetical protein TERM 2091 4037015 - 4036972 - G 93 -12.4 -4.42653 | gap 1 AGCGGATCGAGAAAA CGAGTGA-CGAGCAGGGGCAC CAT GCGCCGATGCTCGATCACGCG CATGACAGGCCGGTG TERM 2092 4037233 - 4037209 - g 75 -12.8 -3.68222 | CCTGAAGGCCAAGAA GGCGCTGGCC GACAT GGCCAGCGGC GACGTGCTCAAGGTG Lcho_3614 4037141 - 4037371 + | SirA family protein Lcho_3615 4037633 - 4037346 - | hypothetical protein Lcho_3616 4039322 - 4037742 - | Ppx/GppA phosphatase TERM 2093 4039442 - 4039495 + r 74 -11.1 -3.62522 | gap 4, opp_overlap 4039437 4039442 4039445, overlap 4039443 4039445 GGACGCAACATGACA GGAC-GA-TG-GCAGCGGCG-GCCCGC TCAC GCGGGCACGCCGCTGCGCGCTCAGCTC TTCTTGCCGCCGTTG TERM 2094 4039443 - 4039493 + r 73 -12.6 -3.38991 | gap 3, opp_overlap 4039442 4039437 4039445, overlap 4039442 4039445 GACGCAACATGACAG GACGA-TG-GCAGCGGCG-GCCCGC TCAC GCGGGCACGCCGCTGCGCGCTCAGC TCTTCTTGCCGCCGT TERM 2095 4039487 - 4039445 - R 71 -14.2 -2.70232 | gap 3, opp_overlap 4039443 4039442 4039445, overlap 4039442 4039437 CGCAACATGACAGGA CGATGGCAGCGGCG-GCCCGC TCAC GCGGGCACGCCGCTGCG--CG CTCAGCTCTTCTTGC TERM 2096 4039445 - 4039492 + r 70 -13.6 -2.63073 | gap 4, opp_overlap 4039445 4039442 4039437, overlap 4039443 4039442 CGCAACATGACAGGA C-GA-TG-GCAGCGGCG-GCCCGC TCAC GCGGGCACGCCGCTGCGCGCTCAG CTCTTCTTGCCGCCG Lcho_3617 4040094 - 4039489 - | hypothetical protein Lcho_3618 4041222 - 4040134 - | Mg2 transporter protein CorA family protein TERM 2097 4042037 - 4042089 + G 75 -17.5 -2.62184 | GGTCAACTTCATCGG CGACTTCGAGGCCGCGGTGGCGCAC GAG GCCCGCAAGCGCGGCCTCGACGGCG TGATCTGCGGCCACA Lcho_3619 4041369 - 4042301 + | metallophosphoesterase Lcho_3620 4042381 - 4043316 + | phosphoesterase PA-phosphatase related Lcho_3621 4043316 - 4044314 + | hypothetical protein Lcho_3622 4044311 - 4045507 + | glycosyl transferase family protein TERM 2098 4046435 - 4046453 + G 70 -10.2 -3.81287 | overlap 4046436 GCTGGCGCGAGGCCT GGCGGCAG CCG CTGCCGCG TTTCCTGCTGCTGTG Lcho_3623 4045504 - 4047315 + | glycosyl transferase family protein TERM 2099 4048144 - 4048108 - g 71 -15.8 -2.62735 | gap 1, overlap 4048096 ACACCGTCGAGATCA CGACC-GCCGCGGCGCC GGCG GGCGACACGGCCGGCCG GGGCGATGCGTCGTG Lcho_3624 4047312 - 4049075 + | glycosyltransferase Lcho_3625 4049072 - 4049860 + | phosphoesterase PA-phosphatase related Lcho_3626 4050702 - 4049836 - | UTP-glucose-1-phosphate uridylyltransferase Lcho_3627 4050847 - 4051875 + | D-isomer specific 2-hydroxyacid dehydrogenase catalytic region Lcho_3628 4054702 - 4051841 - | valyl-tRNA synthetase Lcho_3629 4054919 - 4055767 + | 3-hydroxybutyryl-CoA dehydrogenase Lcho_3630 4055809 - 4056819 + | diacylglycerol kinase catalytic region Lcho_3631 4056851 - 4057771 + | LysR family transcriptional regulator Lcho_3632 4057852 - 4058880 + | amidohydrolase 2 Lcho_3633 4058883 - 4059578 + | 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase Lcho_3634 4059589 - 4060530 + | phosphogluconate dehydrogenase, NAD-binding,-like protein Lcho_3635 4060534 - 4061478 + | amidohydrolase 2 TERM 2100 4061835 - 4061825 - f 70 -2.4 -4.68384 | ATTCATCTAATAAAA GGAG ACC CGCC ATGGCCCTACAAAAG Lcho_3636 4061836 - 4062276 + | protocatechuate 4,5-dioxygenase, alpha subunit Lcho_3637 4062278 - 4063135 + | protocatechuate 4,5-dioxygenase Lcho_3638 4063147 - 4064103 + | oxidoreductase domain-containing protein Lcho_3639 4064127 - 4065077 + | auxin efflux carrier Lcho_3640 4066438 - 4065113 - | hypothetical protein TERM 2101 4067708 - 4067671 - gH 85 -17 -3.17075 | gap 1 CGTGCTGCAAGCCAA CCGCCAGCGC-GCCGCC TGGCT GACGGCGGCGCTGGCGC CGCTGCGAACGGATC Lcho_3641 4066580 - 4068001 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase Lcho_3642 4067967 - 4069193 + | 8-amino-7-oxononanoate synthase TERM 2102 4069791 - 4069756 - g 70 -12.6 -3.36327 | gap 1 GCACTGCAGCGAGAA TGTCGCCACCCTGAACC ACG AGTTC-GGGCGGCGCCA CCAGGCGGTCTGCCT Lcho_3643 4069190 - 4069900 + | dethiobiotin synthase Lcho_3644 4069991 - 4071028 + | biotin synthase TERM 2103 4071191 - 4071224 + G 70 -9.4 -3.85698 | overlap 4071173 TGTTGACGCGGCATG CCGACGTCGACGCG GTGCTG CGCGACGACGCCCG TTTCTCGGCCCAGCG Lcho_3645 4071028 - 4072317 + | cytochrome P450 Lcho_3646 4072720 - 4072406 - | small multidrug resistance protein Lcho_3647 4073832 - 4072831 - | alcohol dehydrogenase TERM 2104 4073605 - 4073574 - G 85 -19.4 -3.02263 | opp_overlap 4073564, overlap 4073562 AGACGCTGGCGAAGA CCGCGTCGCCCGGC TTGA ACCGGGTGACGCGG CTGCCCACTTCGATC Lcho_3648 4074029 - 4074643 + | TetR family transcriptional regulator Lcho_3649 4075424 - 4074711 - | ABC transporter-related protein Lcho_3650 4076274 - 4075426 - | ABC transporter-related protein Lcho_3651 4077278 - 4076271 - | inner-membrane translocator Lcho_3652 4078240 - 4077359 - | inner-membrane translocator Lcho_3653 4079539 - 4078367 - | extracellular ligand-binding receptor Lcho_3654 4080354 - 4079536 - | alpha/beta hydrolase fold TERM 2105 4079650 - 4079683 + g 79 -17.5 -3.03124 | gap 1, opp_overlap 4079647 4079648, overlap 4079652 4079654 4079656 CAACTCCAGCAACTC GGTCTGCGGCA-CGCG GCG CGCGATGCCGCGGATC TGTTCGAGCGTGCCG TERM 2106 4079652 - 4079681 + g 75 -16.5 -3.07344 | gap 1, opp_overlap 4079647 4079648, overlap 4079650 4079654 4079656 ACTCCAGCAACTCGG TCTGCGGCA-CGCG GCG CGCGATGCCGCGGA TCTGTTCGAGCGTGC Lcho_3655 4081946 - 4080351 - | benzoate-CoA ligase family Lcho_3656 4083539 - 4081980 - | aldehyde dehydrogenase Lcho_3657 4084014 - 4083550 - | hypothetical protein Lcho_3658 4084114 - 4085070 + | XRE family transcriptional regulator Lcho_3659 4085185 - 4086852 + | benzoyl-CoA-dihydrodiol lyase Lcho_3660 4086976 - 4088403 + | benzoyl-CoA dioxygenase B Lcho_3661 4088609 - 4089904 + | benzoyl-CoA oxygenase/reductase, BoxA protein TERM 2107 4089975 - 4089956 - f 75 -12.2 -3.51161 | CAAACCCCCAGACAA TCGACCGA CCGG TCGGTCGA GAATAATGAGCTCGC TERM 2108 4090563 - 4090518 - g 76 -16.1 -3.16564 | gap 1 GCCCTACGTGACCAA CGCGGTCGGCAAGCGCCAGGCG CGG CGGCTGGCGCT-GACGACCACC CGCATCAAGGCCGCC Lcho_3662 4090048 - 4090851 + | enoyl-CoA hydratase/isomerase TERM 2109 4092031 - 4092088 + G 100 -29.3 -4.08767 | opp_overlap 4092062 TGGCGTTTGCGGTGG CCG-GTGCGGCCAGCCACGCCTGGCGC AAGCAG GCGCC-GGCCTGGCTGGCCGCGCTCGG TTTTGCGCCGATGCC Lcho_3663 4090878 - 4092395 + | 3-hydroxybutyryl-CoA dehydrogenase Lcho_3664 4092419 - 4092874 + | dehydratase Lcho_3665 4092921 - 4094123 + | beta-ketoadipyl CoA thiolase TERM 2110 4094154 - 4094172 + T 100 -8.8 -5.84381 | opp_overlap 4094154, overlap 4094146 CAACTCAAGAAAAAA CCGGGC CTTGCGA GCCCGG TTTTTTTATTCCTCA TERM 2111 4094172 - 4094154 - T 100 -9.5 -5.5074 | opp_overlap 4094146 4094154 CAACTCAAGAAAAAA CCGGGCC TTGCG AGCCCGG TTTTTTTATTCCTCA Lcho_3666 4098930 - 4094185 - | putative multicopper oxidase TERM 2112 4097870 - 4097927 + g 71 -15.3 -3.07222 | opp_overlap 4097867 TTGATCGCGAAACCG TCGCGCAGGCCGGCGCCGGCGCCGGTG GCAT CGAAGGCGTCGCCGTAGGCCTGCACGG TCTTGAGCTCGTCGT TERM 2113 4099574 - 4099548 - H 72 -13 -3.09175 | gap 1, overlap 4099539 AAGAAATCCTCAACA GCGC-GCGGCC GCACAT GGCCGCAGCGC CCCCAACGACCCACA Lcho_3667 4099601 - 4100947 + | IPT/TIG domain-containing protein Lcho_3668 4100956 - 4103466 + | fibronectin type III domain-containing protein TERM 2114 4103495 - 4103522 + F 100 -19.8 -4.7254 | TCAGGCTGATCGCAA CGCCCCGGACGG CTCG CCGCCCGGGGCG TTTTTCATGCCGGAT Lcho_3669 4103663 - 4104865 + | monooxygenase FAD-binding Lcho_3670 4104862 - 4105917 + | cupin 2 domain-containing protein Lcho_3671 4105970 - 4106677 + | fumarylacetoacetate (FAA) hydrolase Lcho_3672 4106682 - 4107320 + | maleylacetoacetate isomerase Lcho_3673 4107505 - 4108041 + | hypothetical protein TERM 2115 4108965 - 4108990 + G 72 -12.5 -3.5393 | CAGATGCCGGCCGAA CTGGCCGCCTG GGTG CAGGCCGCCGG TTTCCCGCCGCTGCT Lcho_3674 4108038 - 4109369 + | TRAP dicarboxylate transporter, DctM subunit TERM 2116 4110358 - 4110348 - g 71 -6.8 -4.19704 | CAAGGCGAGCGAAAA CGTC GAC GACG AGTGGATCAAGGACG Lcho_3675 4109413 - 4110447 + | TRAP dicarboxylate transporter- DctP subunit TERM 2117 4110464 - 4110432 - f 72 -12.7 -3.14132 | CCGCGCGCTGATCAA TCAGTACGACCGCTG AAC CAGCGGTTGAACCGA ACCCGTGACCACGCC TERM 2118 4110501 - 4110540 + F 100 -16.5 -4.56775 | gap 1, overlap 4110502 4110503 GCGTGGTGCCACGCG ATGCTGGCCGC-CACCTG ATCGA CAGGTGCGCGGCCAGCGC TTTTTCGAGGGCACT TERM 2119 4110502 - 4110539 + F 100 -20 -3.33744 | gap 1, overlap 4110501 4110503 CGTGGTGCCACGCGA TGCTGGCCGC-CACCTG ATCGA CAGGTGCGCGGCCAGCG CTTTTTCGAGGGCAC TERM 2120 4110503 - 4110538 + F 100 -21.3 -2.60032 | gap 1, overlap 4110502 4110501 GTGGTGCCACGCGAT GCTGGCCGC-CACCTG ATCGA CAGGTGCGCGGCCAGC GCTTTTTCGAGGGCA Lcho_3676 4110633 - 4110857 + | hypothetical protein Lcho_3677 4110868 - 4111692 + | hypothetical protein Lcho_3678 4113432 - 4111705 - | ABC transporter Lcho_3679 4113948 - 4113496 - | signal-transduction protein Lcho_3680 4114635 - 4114075 - | phosphoglycerate mutase TERM 2121 4114230 - 4114189 - G 76 -15.9 -3.21099 | gap 1, opp_overlap 4114218, overlap 4114166 GGCCCGCACGACGAA GCCGTGCACCACCAGCAGCA CGG TGTCGCCGGCG-TGCACGGC GCGCAGTTCATCGAG TERM 2122 4115809 - 4115831 + G 78 -12 -3.92075 | CACCGGCTGCACGTC TCGCTGTCGT TCG ACGGCGGCGA TTTCTGCATCGAGCT Lcho_3681 4114804 - 4116981 + | hypothetical protein Lcho_3682 4116981 - 4118330 + | hypothetical protein Lcho_3683 4120100 - 4118349 - | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein TERM 2123 4120216 - 4120206 - R 79 -2.4 -5.02074 | overlap 4120208 GCAGTGCTCAAAAAA CCGC CGG GCCG CCCCAAGGTTTTTTG Lcho_3684 4121042 - 4120278 - | IclR family transcriptional regulator TERM 2124 4121303 - 4121356 + G 86 -18.8 -3.14132 | gap 1 CTGTTCGCGCAGCAC GGCGTCGACG-CGGTGCTGGTGCCG GTGCA CGTCGCCAGCGCCGACGTGGCCGCC TTCGTGCGCAGCAGC Lcho_3685 4121204 - 4122097 + | shikimate dehydrogenase substrate binding subunit Lcho_3686 4122164 - 4123315 + | extracellular ligand-binding receptor TERM 2125 4123344 - 4123363 + F 91 -8.5 -4.72272 | opp_overlap 4123317 CCGAGCCGCGCACCG CGCGCTG CTGATC CGGCGCG TTTTTCCTCCCCCGA Lcho_3687 4123413 - 4124288 + | inner-membrane translocator Lcho_3688 4124310 - 4125302 + | inner-membrane translocator TERM 2126 4125376 - 4125349 - g 83 -7.6 -4.62783 | gap 1, overlap 4125350 4125351 CACCGACCTGAAAAA GTCCTACGGCGCG ATC CGCGCGGTGGG-C GGCGTGAGCTTCGAC Lcho_3689 4125299 - 4126057 + | ABC transporter-related protein TERM 2127 4126093 - 4126108 + G 73 -10.4 -3.80573 | opp_overlap 4126089 AGTTCGAGAACGTGC TCGCCG GCTA CGGCGA TTTCATGATCCTCAA TERM 2128 4126399 - 4126429 + G 82 -13.2 -4.08767 | opp_overlap 4126394 4126399 TGGGCATGAAGACCA CGCGCGAGCGCATC CCC GAAGTGCTGGCGCG TTTTCCGCGCGTCAA Lcho_3690 4126059 - 4126808 + | ABC transporter-related protein Lcho_3691 4126961 - 4127848 + | 4-hydroxyphenylpyruvate dioxygenase Lcho_3692 4127862 - 4128779 + | xylose isomerase domain-containing protein TERM 2129 4129123 - 4129164 + G 93 -22.3 -3.16683 | gap 1 CCACGGCTGGGATGA CCGCGGCCGTGGCCGCGGTC GTG GAC-GCGGCCACGGCCGGGA TTGATCGCCTGAGCT Lcho_3693 4128857 - 4129168 + | hypothetical protein Lcho_3694 4129236 - 4130495 + | nucleoside recognition domain-containing protein Lcho_3695 4130559 - 4131557 + | aldo/keto reductase Lcho_3696 4131671 - 4132276 + | hypothetical protein Lcho_3697 4133191 - 4132268 - | LysR family transcriptional regulator TERM 2130 4132974 - 4132937 - G 70 -13.6 -3.14211 | gap 3 ATCCGGCGCCACGAA CCGCTGCAGGC-CGTCGAG CAG CTC-ACGCGCCTGC-GCGG CCAGCGCGCGGGCCC Lcho_3698 4133311 - 4133673 + | extradiol ring-cleavage dioxygenase LigAB LigA subunit Lcho_3699 4133678 - 4134592 + | protocatechuate 4,5-dioxygenase Lcho_3700 4134728 - 4135804 + | endonuclease/exonuclease/phosphatase Lcho_3701 4135851 - 4137338 + | AMP nucleosidase Lcho_3702 4139966 - 4137375 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Lcho_3703 4143028 - 4139963 - | Hpt sensor hybrid histidine kinase Lcho_3704 4143930 - 4143025 - | hypothetical protein Lcho_3705 4144802 - 4144068 - | peptidase M48 Ste24p Lcho_3706 4145137 - 4146633 + | RND efflux system outer membrane lipoprotein TERM 2131 4147056 - 4147009 - g 71 -16.3 -2.66316 | overlap 4147006 TGCTCGACCAGATCA CCCGCACCCGCGCCAGCCT-CGC CGCC GCGCAGGCCGGCGTGG-CGCAGG CCGCCGCCGCCGCCA Lcho_3707 4146630 - 4147943 + | RND family efflux transporter MFP subunit Lcho_3708 4147940 - 4148704 + | ABC transporter-related protein Lcho_3709 4148704 - 4149915 + | hypothetical protein TERM 2132 4149948 - 4149930 - T 100 -16 -4.90869 | AGCACGAATGAAAAA GGGCCTGC GAT GCAGGCCC TTCGGATCACCGCGC Lcho_3710 4150917 - 4149979 - | peptidoglycan binding domain-containing protein TERM 2133 4151082 - 4151069 - R 71 -9.5 -3.69216 | overlap 4151067 CGTCGACGGAAAACA CCGGC ACCG GCCGG ATCAGAAATCGCCCT Lcho_3711 4151671 - 4151084 - | rhodanese domain-containing protein Lcho_3712 4153220 - 4151784 - | RND efflux system outer membrane lipoprotein Lcho_3713 4156399 - 4153223 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein Lcho_3714 4157636 - 4156410 - | RND family efflux transporter MFP subunit TERM 2134 4157932 - 4157874 - g 71 -9 -4.12603 | gap 4, opp_overlap 4157892, overlap 4157875 4157894 CGCACCAAAGAAGAA GCCGCTGCCACCCGCGAACACCTGCTCGAC ACC GCCGAGCAGGTGTTC-CTGGC-GC-GTGG- CGTGTCGCGCGCCAG TERM 2135 4157932 - 4157875 - g 71 -15 -3.06839 | gap 3, opp_overlap 4157892, overlap 4157874 4157894 GCACCAAAGAAGAAG CCGCTGCCACCCGCGAACACCTGCTCGAC ACC GCCGAGCAGGTGTTC-CTGGC-GC-GTGG CGTGTCGCGCGCCAG TERM 2136 4157892 - 4157918 + G 80 -16.6 -3.14931 | opp_overlap 4157874 4157875 4157894 GCTGCCACCCGCGAA CACCTGCTCGAC ACC GCCGAGCAGGTG TTCCTGGCGCGTGGC TERM 2137 4157916 - 4157894 - g 75 -15.6 -3.03124 | opp_overlap 4157892, overlap 4157874 4157875 TGCCACCCGCGAACA CCTGCTCGAC ACC GCCGAGCAGG TGTTCCTGGCGCGTG TERM 2138 4158157 - 4158112 - g 73 -10.4 -3.74251 | opp_overlap 4158142, overlap 4158113 GAGATTTCGAGCAAA TGCTGCGC-CAGGCGGTGCTGC AGCC GCTGCAGCGCCTGTGCGCCG-A CGAGCGCACGCGGCG Lcho_3715 4157850 - 4158476 + | TetR family transcriptional regulator Lcho_3716 4158804 - 4158493 - | hypothetical protein TERM 2139 4158850 - 4158840 - H 75 -6.8 -4.41616 | AGCGCGCGAAAGAAA GGCA GAG TGCC ATCAACGGACCAGGC Lcho_3717 4158994 - 4159440 + | activator of Hsp90 ATPase 1 family protein TERM 2140 4159440 - 4159474 + F 75 -14.2 -3.01924 | opp_overlap 4159431 CGAAATCGCGGACTG ACCCCGGCGCCGTCGA TCC TTGACGGCATCGGGGC TGTTGGAAGACAGTC Lcho_3718 4159556 - 4159885 + | cupin 2, barrel TERM 2141 4161699 - 4161653 - g 72 -3.5 -4.56597 | gap 1, overlap 4161654 4161655 CCGGCGGTCGAAAAA GGCGTGCGGCTGGCGATGGACG CGGG CGTG-ATCGCCGGCCACCCGGT CGTCGACGTGCGGGT Lcho_3719 4160015 - 4162117 + | small GTP-binding protein TERM 2142 4162123 - 4162161 + T 89 -18.1 -3.06302 | gap 1, overlap 4162127 CGAGGACTGAGCGGA CGAGGCGCGGGCGCGTCC ACAC GGGCGC-CCCGCGCTGCG TTCAGTGCACGTCCT TERM 2143 4162127 - 4162157 + T 86 -18.3 -2.54896 | gap 1, overlap 4162123 GACTGAGCGGACGAG GCGCGGGCGCGTCC ACAC GGGCGC-CCCGCGC TGCGTTCAGTGCACG Lcho_3720 4163860 - 4162163 - | hypothetical protein Lcho_3721 4164985 - 4163882 - | basic membrane lipoprotein TERM 2144 4165044 - 4165021 - R 100 -15.3 -4.35044 | opp_overlap 4165034 GGATTGAAAGACAAA CCGCCTGCG GGGGCA CGCAGGCGG CTGGCGGGATTGTCG TERM 2145 4165112 - 4165067 - R 74 -15.3 -2.62396 | overlap 4165074 4165075 4165091 GATTGTCGCAGAGCA GCACGAAGCCGGCGACGGACG AAAG CGCCCACCGGCGCCTGCGTGC GTCAGCCGGACAGGC TERM 2146 4165122 - 4165074 - R 91 -17.4 -3.24188 | gap 1, overlap 4165067 4165075 4165091 GCAGAGCAGCACGAA GCCGGC-GACGGACGAAAGCGCC CACC GGCGCCTGCGTGCGTCAGCCGGA CAGGCCCTGGAACGA TERM 2147 4165121 - 4165075 - R 100 -20.9 -2.54192 | gap 1, overlap 4165067 4165074 4165091 CAGAGCAGCACGAAG CCGGC-GACGGACGAAAGCGCC CACC GGCGCCTGCGTGCGTCAGCCGG ACAGGCCCTGGAACG TERM 2148 4165104 - 4165091 - R 71 -9.5 -3.76224 | overlap 4165067 4165075 4165074 CGGCGACGGACGAAA GCGCC CACC GGCGC CTGCGTGCGTCAGCC Lcho_3722 4165377 - 4165114 - | hypothetical protein Lcho_3723 4166374 - 4165463 - | formate dehydrogenase family accessory protein FdhD Lcho_3724 4166737 - 4166384 - | hypothetical protein Lcho_3725 4167918 - 4166764 - | formate dehydrogenase, gamma subunit TERM 2149 4167822 - 4167797 - G 82 -13.9 -3.78775 | overlap 4167798 GCCTGGACCACGAAA CCGGCCGGCGC CGAA GCGCCCGCCGA CACAGCCTGCTGGGC TERM 2150 4167821 - 4167798 - G 70 -15.2 -2.87051 | overlap 4167797 CCTGGACCACGAAAC CGGCCGGCGC CGAA GCGCCCGCCG ACACAGCCTGCTGGG Lcho_3726 4168177 - 4167944 - | putative lipoprotein Lcho_3727 4168818 - 4168174 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2151 4168924 - 4168936 + r 79 -5.5 -4.70659 | GCGCAGCGGCCGGGG GTGGT CAT GCCAC TTTTTCGATCTGGCA Lcho_3728 4171912 - 4168928 - | molybdopterin oxidoreductase TERM 2152 4170692 - 4170723 + g 74 -5 -4.59853 | GCCCTGCACGTTGTC GTGGCCGCGGAA GATGTTGG TGCCGCCGCCGC TTTTTCCCACATTGC TERM 2153 4170852 - 4170871 + g 70 -13.6 -3.14132 | TCGGCCATCGTGCGC GCCACCTG CAGG CAGGTGGC TTCGTCGACGCCGCA Lcho_3729 4172180 - 4171941 - | hypothetical protein Lcho_3730 4172390 - 4172869 + | hypothetical protein Lcho_3731 4172878 - 4173507 + | proline rich protein TERM 2154 4173608 - 4173579 - gf 73 -9.1 -3.90112 | overlap 4173580 GCGCCGCCAAGGAAA CCGCCGCCAGCGG CGAG CCGCTGCTGGTGG CCTGCACGCAGGAAC Lcho_3732 4173413 - 4175644 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Lcho_3733 4175660 - 4176304 + | cytoplasmic chaperone TorD family protein Lcho_3734 4176304 - 4176903 + | molybdopterin-guanine dinucleotide biosynthesis protein A Lcho_3735 4176890 - 4178269 + | two component, sigma54 specific, Fis family transcriptional regulator Lcho_3736 4178269 - 4180296 + | histidine kinase TERM 2155 4181380 - 4181355 - g 80 -3.8 -4.89477 | CGCCGAAGAAGAAAA GCTGCGCGCC CCGCTC GACTCGCTGC GCTACCAGCGTCAGC Lcho_3737 4180690 - 4182180 + | outer membrane efflux protein Lcho_3738 4182230 - 4183027 + | HlyD family secretion protein TERM 2156 4183069 - 4183089 + F 100 -10.4 -5.15969 | gap 1, opp_overlap 4183069 4183068 TGAGCATCAGACAAC GGCCC-CGC CCGA GCGCGGGCC TTTTTTGCATTCAAC TERM 2157 4183908 - 4183932 + G 85 -13.5 -4.08216 | GACGGTGGAGCTGGC CGGCACCGCGG AAG TCTCGGTGCCG TTTTCGGAGGGCTAC TERM 2158 4188828 - 4188882 + G 75 -15.7 -3.05384 | gap 2 CGATGTCGGTGACAC CCGCAGCTACGCGGCCA-CGCTG-GCC GAC GGCTCGGCGCTGCCCGCGTGGCTGAGC TTCGATGCGGCCACG TERM 2159 4189434 - 4189488 + G 75 -15.7 -3.05384 | gap 2 CGATGTCGGTGACTC CCGCAGCTACGCGGCCA-CGCTG-GCC GAC GGCTCGGCGCTGCCCGCGTGGCTGAGC TTCGATGCGGCCACG TERM 2160 4193379 - 4193433 + G 75 -15.7 -3.05384 | gap 2 CGATGTCGGTGACTC CCGCAGCTACGCGGCCA-CGCTG-GCC GAC GGCTCGGCGCTGCCCGCGTGGCTGAGC TTCGATGCGGCCACG TERM 2161 4193682 - 4193736 + G 75 -15.7 -3.05384 | gap 2 CGATGTCGGTGACTC CCGCAGCTACGCGGCCA-CGCTG-GCC GAC GGCTCGGCGCTGCCCGCGTGGCTGAGC TTCGATGCGGCCACG TERM 2162 4195192 - 4195159 - g 75 -14.5 -3.28712 | overlap 4195189 GTTGCCGCGGCAGAA CCGGCTGCAGCCCCG GCTG CGGCGCCACAACCGG CGTTCGACTCGGCGC Lcho_3739 4183129 - 4195824 + | outer membrane adhesin like proteiin TERM 2163 4195948 - 4195981 + G 75 -14.5 -3.39449 | gap 1, opp_overlap 4195950 CGCGCTGTTGCAGAC CACCCGCTCGGC-GGC CAC GCCGGCCGAGCGGCAG TTCGTGTTGCTCAAC TERM 2164 4195979 - 4195950 - g 71 -15.7 -2.62184 | gap 1, opp_overlap 4195948 CGCTGTTGCAGACCA CCCGCTCGGC-GGC CAC GCCGGCCGAGCGGC AGTTCGTGTTGCTCA TERM 2165 4196630 - 4196590 - g 72 -16.1 -2.78712 | overlap 4196587 GGTCGAACCGAATCA GGTCGTGCAGGCCGGCCAG GTG CTGGCCGAGCTGGACGACG ACGCCTTCGCCAGCC Lcho_3740 4195907 - 4197232 + | HlyD family secretion protein Lcho_3741 4197234 - 4199396 + | HlyD domain-containing protein Lcho_3742 4200479 - 4199409 - | adenosine deaminase TERM 2166 4199893 - 4199854 - G 75 -12.8 -3.58343 | GCGACGATGTGGAAA CCGAGTTCGCGGGCGCGT GCAA ACACGCGCTCGAACTTGG CCGGAGGAAAGCCCA TERM 2167 4200592 - 4200562 - H 84 -14.6 -3.35798 | ATCCGGCATCCAGAA GGTTGACGCGCCGC AGC GCGGCGGGCCATCC TGGACGCACGGATCG Lcho_3743 4200715 - 4201839 + | RND family efflux transporter MFP subunit TERM 2168 4203949 - 4203915 - g 87 -12 -4.21275 | overlap 4203917 CCAACGCAGCGAAAA GAGCCACGCGATCGCG CAA CGCCATCGCCCGGCGC TGGAGAAGATCGGCG TERM 2169 4203947 - 4203917 - g 75 -13.2 -3.70331 | overlap 4203915 AACGCAGCGAAAAGA GCCACGCGATCGCG CAA CGCCATCGCCCGGC GCTGGAGAAGATCGG Lcho_3744 4201861 - 4205163 + | acriflavin resistance protein Lcho_3745 4205185 - 4205409 + | hypothetical protein TERM 2170 4205762 - 4205733 - g 70 -2.7 -4.60041 | ATCGAGGGCGAAAAA GCCACCGAACTCG ACAC CATGCTCGACGAC GTCCAGACCCTGCTC Lcho_3746 4205502 - 4205792 + | hypothetical protein Lcho_3747 4205843 - 4206289 + | OsmC family protein Lcho_3748 4206671 - 4206315 - | ArsR family transcriptional regulator Lcho_3749 4207104 - 4206748 - | hypothetical protein Lcho_3750 4207901 - 4207152 - | HAD family hydrolase TERM 2171 4207512 - 4207473 - G 72 -12.8 -3.54741 | gap 1, opp_overlap 4207475, overlap 4207463 4207474 CAGCACCGCCGCAAA GCCGTCGCGCC-ACTGCGC GCC GAGCAGTCGGCGCATCAGC GCGTCGACGTTGCTG Lcho_3751 4208949 - 4207912 - | fructose-bisphosphate aldolase, class II Lcho_3752 4209702 - 4208989 - | HAD family hydrolase Lcho_3753 4211772 - 4209745 - | transketolase Lcho_3754 4212686 - 4211802 - | phosphoribulokinase Lcho_3755 4213901 - 4212804 - | inositol phosphatase/fructose-16-bisphosphatase Lcho_3756 4214627 - 4213950 - | ribulose-phosphate 3-epimerase TERM 2172 4215654 - 4215635 - g 71 -15 -3.03124 | TTTCATGCTCGAACA CGGCGAGG CACA CCTCGCCG AACACGACCGCCCGT Lcho_3757 4214751 - 4215701 + | LysR family transcriptional regulator Lcho_3758 4216751 - 4215702 - | MerR family transcriptional regulator Lcho_3759 4217025 - 4218287 + | hypothetical protein Lcho_3760 4218894 - 4218307 - | hypothetical protein Lcho_3761 4219574 - 4218915 - | hypothetical protein Lcho_3762 4221575 - 4219623 - | K potassium transporter TERM 2173 4220310 - 4220286 - G 75 -12.8 -3.72324 | GATCGCCAGGAAGAA CGCCGTGGCG CCGGC CGCCACCGCG AGCGGCAGCTTCCAG Lcho_3763 4222394 - 4221663 - | two component transcriptional regulator Lcho_3764 4224028 - 4222391 - | histidine kinase TERM 2174 4223397 - 4223365 - G 71 -8.3 -4.09685 | gap 1 GCTGATCCTCGAAAA GCCCGGTGCCCGGC CCCATC GCCCGGC-CCTGGC GCTGGCAGTGCCAGA Lcho_3765 4226358 - 4224109 - | von Willebrand factor type A Lcho_3766 4227178 - 4226372 - | CbbQ/NirQ/NorQ domain-containing protein Lcho_3767 4228896 - 4227514 - | ribulose-bisphosphate carboxylase Lcho_3768 4229871 - 4229002 - | hypothetical protein Lcho_3769 4230428 - 4229925 - | redoxin domain-containing protein TERM 2175 4230264 - 4230246 - G 73 -11 -3.78934 | GGTGGTCGAGAAGAA CACCACCA CGG TGGCGGTG TCGCGCAGGCTCTCG Lcho_3770 4231363 - 4230425 - | beta-lactamase domain-containing protein Lcho_3771 4231603 - 4231980 + | putative cytochrome c Lcho_3772 4232001 - 4233302 + | flavocytochrome c sulphide dehydrogenase flavin-binding Lcho_3773 4233386 - 4233817 + | hypothetical protein Lcho_3774 4233888 - 4235012 + | protein of unknown function DUF395 YeeE/YedE Lcho_3775 4235042 - 4235764 + | hypothetical protein Lcho_3776 4236920 - 4235799 - | protein of unknown function DUF395 YeeE/YedE Lcho_3777 4237134 - 4236952 - | SirA family protein TERM 2176 4237247 - 4237286 + r 70 -11.4 -3.36273 | gap 1 ACCGCCTGCAGCCGC CATGCCCGGGTTG-CCGGC CAC GCCGATCAGCTTGGGCGTG TTGATCTTGCGCGCC Lcho_3778 4238971 - 4237229 - | 5'-nucleotidase domain-containing protein TERM 2177 4239036 - 4239006 - R 93 -15.5 -3.86015 | gap 1 GATTGGTCGGACAAA CGCCCGCG-CAAGT GGGG ACTCGACGCGGGCG CGATGGGCTGCAGGC Lcho_3779 4239742 - 4239080 - | hypothetical protein Lcho_3780 4240572 - 4239763 - | hypothetical protein TERM 2178 4240629 - 4240601 - R 91 -11.1 -4.56597 | gap 1 CGTTGTTGCGAAAAA GCCGTCCACGAT CTGGTC ATCG-GGACGGC TGTGCAGGCCTGTGG Lcho_3781 4240969 - 4240658 - | sulphur oxidation protein SoxZ Lcho_3782 4241445 - 4240987 - | hypothetical protein TERM 2179 4241200 - 4241236 + g 86 -15 -4.10657 | GCGCTTGACGCCCGG CAGCGCGGTCGAGCAG CCGAC CGGCACGACCGCGCCG TTTTCGGCGATGTCG Lcho_3783 4242634 - 4241567 - | cytochrome c class I TERM 2180 4241710 - 4241722 + g 71 -6.9 -4.17556 | opp_overlap 4241696, overlap 4241707 ACGCCACCGCATCGG CGCGG CTG CCGTG TTTCTTGCCGATCTC TERM 2181 4241837 - 4241889 + g 71 -16.2 -2.62263 | gap 2 ACCTTCGTCAGTCGC CTTGGCCACCACCGGCGCAGCGGCCA GGG TGGGCGCGGCGCCG--GGCGGCCGGG TGGTGTCCACGCCGT Lcho_3784 4243991 - 4242618 - | oxidoreductase molybdopterin binding Lcho_3785 4245047 - 4244223 - | putative transmembrane anti-sigma factor TERM 2182 4244721 - 4244691 - G 70 -14.6 -2.87931 | GGCATCGCGCACATA GGCCGGCACGGCCT GCG ACGGCGCGCCGGCC AGATCGACCGCACCG Lcho_3786 4245608 - 4245066 - | ECF subfamily RNA polymerase sigma-24 factor Lcho_3787 4246034 - 4245645 - | hypothetical protein Lcho_3788 4246192 - 4247208 + | C4-dicarboxylate transporter/malic acid transport protein TERM 2183 4248773 - 4248715 - g 90 -21 -2.80994 | TCGAATCGCAGGACA CGGCGGACACCGAGCTGGTGCTG-GCGG TCACG CCGCGCATCGCCCGCCCGGTG-CCGCCG CTGCCCGCCGGCGGC TERM 2184 4248963 - 4248908 - g 72 -12.2 -3.63991 | GATCACGGGCAACAA CCGCGCGGCCGGCGGTGCGGGCTCAC GCGC GGGAGCCGGTGGCGCCGGCGGCATGG GCAGCCTGCCCGACC Lcho_3789 4247337 - 4249127 + | type II and III secretion system protein TERM 2185 4249124 - 4249161 + T 89 -18.6 -3.16564 | CGCCGCCGCGCCACG CTGATCCG-GCACGGGCC ATGC GGCCCG-GCGCGGATCAG TTGATGCAGTCGAGC Lcho_3790 4249439 - 4249158 - | hypothetical protein Lcho_3791 4250156 - 4249503 - | electron transport protein SCO1/SenC Lcho_3792 4252117 - 4250210 - | hypothetical protein Lcho_3793 4252896 - 4252114 - | peptidylprolyl isomerase FKBP-type Lcho_3794 4258913 - 4252992 - | fibronectin type III domain-containing protein TERM 2186 4255910 - 4255950 + g 70 -13.1 -3.30124 | TGTCGGTGTAGCCAC CGCCGCCGGCTGCGCCG AGCGAGG CGATGCTGCCGTCGGCG TTGTAGACGATCGGG TERM 2187 4259471 - 4259487 + H 77 -5 -4.65916 | overlap 4259473 TCGATGCAACCGATT GCGCCG AAAGA CGGCTC TTTTCTTCAGATCGG TERM 2188 4260680 - 4260664 - g 79 -7.9 -4.60487 | overlap 4260665 CACCAGGGCGAAAAA GCGGTGC AGA GCACCGA GACCGAAATCACCTT Lcho_3795 4259551 - 4260702 + | methyl-accepting chemotaxis sensory transducer Lcho_3796 4260750 - 4261079 + | response regulator receiver protein TERM 2189 4261147 - 4261115 - g 74 -9.8 -4.15006 | gap 1 ATACCGATCCGAAAA CCGGTGATGCGCCGC GCAC GCTGCGCATC-CAGG GCGAACTGAGCATAT Lcho_3797 4261096 - 4261428 + | anti-sigma-factor antagonist Lcho_3798 4261450 - 4263648 + | CheA signal transduction histidine kinase Lcho_3799 4263808 - 4266126 + | methyl-accepting chemotaxis sensory transducer Lcho_3800 4266149 - 4266679 + | CheW protein Lcho_3801 4266708 - 4267760 + | response regulator receiver modulated CheB methylesterase TERM 2190 4267805 - 4267791 - f 76 -5.6 -4.56597 | GCGCGCCGCGAAAAA CGACGA TCA TCGGCG TCCCCGACAGCTGGA Lcho_3802 4267833 - 4268261 + | protein of unknown function DUF395 YeeE/YedE TERM 2191 4268367 - 4268384 + G 72 -5.5 -4.38712 | gap 1, overlap 4268367 GGCGCAGATGGTCGA CCC-GCGC AAG GTGCTGGG TTTTCTCGACCTGGC Lcho_3803 4268269 - 4268748 + | protein of unknown function DUF395 YeeE/YedE Lcho_3804 4268904 - 4269917 + | sulfate ABC transporter, periplasmic sulfate-binding protein Lcho_3805 4269924 - 4270757 + | sulfate ABC transporter, inner membrane subunit CysT TERM 2192 4271284 - 4271314 + G 73 -15.4 -3.18681 | CCTGAAGGTCATCTT CGCGGTGCCCGGCA TCG TGCTGGCCACCGTG TTCGTGACCTTCCCG TERM 2193 4271724 - 4271766 + G 76 -16.3 -3.14132 | opp_overlap 4271739 4271747 GCCACCCCCCGAGGG GGCTCCGCCAGCAGA-CCGGC AAA GCCGGATCTGC-GGCGGCGGC TTGATCAACACAACC Lcho_3806 4270757 - 4271770 + | sulfate ABC transporter, inner membrane subunit CysW Lcho_3807 4271798 - 4272865 + | sulfate ABC transporter, ATPase subunit Lcho_3808 4274371 - 4272914 - | PASTA domain-containing protein Lcho_3809 4276087 - 4274489 - | gamma-glutamyltransferase Lcho_3810 4277103 - 4276165 - | LysR family transcriptional regulator TERM 2194 4277241 - 4277223 - H 72 -11.6 -3.47349 | opp_overlap 4277235 TCGGCAAACGCATAA GCGGCGGG TGG CCCGGCGC AGCGATCGGCGCCGG Lcho_3811 4277298 - 4277705 + | hypothetical protein Lcho_3812 4278403 - 4277729 - | phosphoglycerate mutase TERM 2195 4278489 - 4278512 + H 73 -9.4 -3.85235 | opp_overlap 4278489 4278488, overlap 4278494 GGGCGCTGCCATAAT CCGGCGCCCG CCCT CGTGCGCGGG CTTTTTTTGCGACTT TERM 2196 4278494 - 4278513 + H 100 -10.6 -5.43866 | opp_overlap 4278489 4278488, overlap 4278489 CTGCCATAATCCGGC GCCCGCCC TCGT GCGCGGGC TTTTTTTGCGACTTC Lcho_3813 4278557 - 4279018 + | protein-export protein SecB TERM 2197 4279866 - 4279833 - g 79 -16.7 -3.05816 | gap 1 CGACCTGTCACGCAA CCGCCGCGTCGGCCTG CGG CTGGCCGACG-GGCAG ACGCTGGCGCAGATC Lcho_3814 4279051 - 4280064 + | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) Lcho_3815 4280561 - 4280091 - | RNA methyltransferase TERM 2198 4280467 - 4280455 - G 79 -5.5 -4.65895 | opp_overlap 4280459, overlap 4280456 4280457 4280459 TCGTCCATCGAAAAA CCGAG CGG CTCGA TCAGGTGCAGCTCGC Lcho_3816 4281418 - 4280618 - | putative phosphoribosyl transferase Lcho_3817 4281447 - 4282379 + | biotin synthesis protein BioC TERM 2199 4283610 - 4283570 - g 71 -8.2 -4.02817 | gap 1 CGGCGAGAAGAAGAA GCTCGCCG-CCCTGGCCGA TGAT CCGGCCAAGGTCTGGAAGC TCGACGAGCTGGTCG Lcho_3818 4282746 - 4283912 + | cytochrome c oxidase, subunit II Lcho_3819 4283942 - 4285576 + | cytochrome c oxidase, subunit I Lcho_3820 4285579 - 4285692 + | hypothetical protein Lcho_3821 4285697 - 4286341 + | cytochrome c oxidase assembly protein CtaG/Cox11 Lcho_3822 4286338 - 4286589 + | hypothetical protein Lcho_3823 4286691 - 4287572 + | cytochrome c oxidase subunit III TERM 2200 4287632 - 4287658 + T 88 -13.8 -3.88498 | opp_overlap 4287637, overlap 4287637 CAGCACACGGCAAGA AAAAAGAGCGCC CTC GGCGCTCTTTTG TTTGGTGTGTCGCGG TERM 2201 4287653 - 4287637 - T 100 -13.7 -5.46657 | opp_overlap 4287632 4287637 CACGGCAAGAAAAAA GAGCGCC CTC GGCGCTC TTTTGTTTGGTGTGT TERM 2202 4287637 - 4287653 + T 100 -13.7 -4.98061 | opp_overlap 4287637, overlap 4287632 CACGGCAAGAAAAAA GAGCGCC CTC GGCGCTC TTTTGTTTGGTGTGT Lcho_3824 4287791 - 4287678 - | hypothetical protein Lcho_3825 4287904 - 4288659 + | hypothetical protein Lcho_3826 4288667 - 4289329 + | hypothetical protein Lcho_3827 4289367 - 4290602 + | cytochrome oxidase assembly Lcho_3828 4290599 - 4291516 + | protoheme IX farnesyltransferase Lcho_3829 4291513 - 4292148 + | electron transport protein SCO1/SenC Lcho_3830 4294053 - 4292155 - | ABC transporter-related protein TERM 2203 4292618 - 4292591 - G 76 -7.6 -4.37092 | overlap 4292614 ACCGCGTCGACAAAA CGGCGGTCGTGG CTGA CCAGGAACACCG TACCGGGATAGCTCT TERM 2204 4294099 - 4294081 - R 100 -13.1 -5.42514 | GCAGAAATGAAAAAA CGGCCGG GCAAG CCGGCCG TTGGGATGCAGTCAG Lcho_3831 4294700 - 4294152 - | peptidoglycan-associated lipoprotein TERM 2205 4294751 - 4294727 - R 75 -7.8 -4.24075 | overlap 4294742 AGGCAGCAATAGAAA TGGCCGCATG AAAAA CACGCGGACA GCTCGTGAGTTTAAC TERM 2206 4294758 - 4294742 - R 75 -3.6 -4.72272 | overlap 4294727 TGGCCGCATGAAAAA CACGCG GACAG CTCGTG AGTTTAACAACCCCA Lcho_3832 4296504 - 4294846 - | apolipoprotein N-acyltransferase Lcho_3833 4297421 - 4296501 - | CBS domain-containing protein Lcho_3834 4297590 - 4298621 + | cobalamin synthesis protein P47K Lcho_3835 4298949 - 4299437 + | TraR/DksA family transcriptional regulator Lcho_3836 4299495 - 4301231 + | hypothetical protein Lcho_3837 4301312 - 4301848 + | 20S proteasome A and B subunits Lcho_3838 4301845 - 4303200 + | heat shock protein HslVU, ATPase subunit HslU Lcho_3839 4304012 - 4303224 - | Baf family transcriptional activator Lcho_3840 4304685 - 4304083 - | hypothetical protein TERM 2207 4304719 - 4304756 + r 79 -5.6 -4.62471 | overlap 4304711 4304723 4304730 TCGCTGGGCGGATCG TGCTGCGCGG-ATCCGCT TTGC GGCGGATTCTGCGCT-CA TTTTTCACACTTGCA TERM 2208 4304723 - 4304753 + r 71 -11.9 -3.24823 | gap 1, overlap 4304711 4304719 4304730 TGGGCGGATCGTGCT GCGCGG-ATCCGCT TTGC GGCGGATTCTGCGC TCATTTTTCACACTT Lcho_3841 4305667 - 4304831 - | nitrate ABC transporter, ATPase subunits C and D Lcho_3842 4306678 - 4305683 - | nitrate ABC transporter, inner membrane subunit TERM 2209 4306457 - 4306403 - G 73 -10.7 -3.77553 | gap 3, opp_overlap 4306446 CAACAGCAGGAACAA CGCGAAGCCGACCGCCG-GTGCCAGC ACCTTG GCCAGCGCACGGCGG-CG-CTGCGCG CGCGCCAGCGCGGCG Lcho_3843 4307952 - 4306699 - | NO3-/NO2-ABC transporter TERM 2210 4307913 - 4307903 - G 74 -2.4 -4.64676 | GCACGTTGAAGAAAA TCGC GTC GCGG CAGGTTCACGGGCGT TERM 2211 4308943 - 4308933 - g 71 -8.2 -4.14243 | overlap 4308934 CACCGCACTCGAAAA CGGC AAG GCCG ACGCCTCGCTGGTGG TERM 2212 4309867 - 4309852 - g 74 -4.6 -4.58395 | overlap 4309854 4309855 TCGATCCCCGAAAAA CACCGC GCCT GCGACG CGCTCGAAGAACAGG TERM 2213 4309911 - 4309879 - g 75 -13.3 -3.61715 | GACGCGCTCGAAGAA CAGGCCGTGCTGCGC GAG GCCCAGCTCGACCCG GCCGCCCGCAAGCTG Lcho_3844 4308382 - 4311672 + | methylmalonyl-CoA mutase, large subunit Lcho_3845 4312662 - 4311700 - | beta-lactamase domain-containing protein TERM 2214 4312731 - 4312707 - H 72 -12.8 -3.07043 | opp_overlap 4312707, overlap 4312720 CGGACGACGTGAACA GCGCCGCAGC ATACG GCCGCAGCGC CGATCGCGCAGCGGT Lcho_3846 4312878 - 4313045 + | hypothetical protein TERM 2215 4313088 - 4313116 + F 81 -11 -3.96188 | gap 1, overlap 4313090 GGCCTGTGACGGGAT C-CCGAGACGGCC TCCT GGCCGTCTCGTCG TTTGTGCATCTCCTT TERM 2216 4313090 - 4313113 + F 89 -18.2 -3.03459 | overlap 4313088 CCTGTGACGGGATCC CGAGACGGCC TCCT GGCCGTCTCG TCGTTTGTGCATCTC Lcho_3847 4313157 - 4314854 + | FAD dependent oxidoreductase Lcho_3848 4316267 - 4314882 - | hypothetical protein Lcho_3849 4316408 - 4317901 + | histidine kinase Lcho_3850 4317906 - 4318580 + | two component LuxR family transcriptional regulator TERM 2217 4319300 - 4319310 + G 71 -8.2 -4.13767 | opp_overlap 4319290 4319291 ATCAAGGCCGGCAAG CGCC CGC GGCG TTTTGCGATGACGCC Lcho_3851 4318727 - 4319731 + | YVTN beta-propeller repeat-containing protein Lcho_3852 4320017 - 4319778 - | hypothetical protein Lcho_3853 4321839 - 4320088 - | sodium/hydrogen exchanger TERM 2218 4321670 - 4321654 - G 73 -15.1 -3.15249 | overlap 4321608 4321606 GACATCGGCCACGAA GCCCGGC GTG GCCGGGC CGATCAGGATGCCCG Lcho_3854 4321916 - 4323103 + | acetyl-CoA acetyltransferase TERM 2219 4323153 - 4323172 + T 100 -15 -4.93547 | opp_overlap 4323153 ACCTGCCAACAAAAA CGGCACGC TAAC GCGTGCCG TTTTTCATTGCTTAA TERM 2220 4323172 - 4323153 - T 100 -15 -5.06816 | opp_overlap 4323153 ACCTGCCAACAAAAA CGGCACGC TAAC GCGTGCCG TTTTTCATTGCTTAA Lcho_3855 4323584 - 4323192 - | hypothetical protein Lcho_3856 4323982 - 4323680 - | antibiotic biosynthesis monooxygenase TERM 2221 4323757 - 4323737 - G 74 -4.5 -4.56597 | opp_overlap 4323756, overlap 4323738 CGGCTGGGCGAAAAA CGGCCCGAC GAT GGCGCGCCA GTCGGCAAACGCCGG Lcho_3857 4324072 - 4324626 + | YaeQ family protein Lcho_3858 4324766 - 4326409 + | peptide chain release factor 3 Lcho_3859 4327595 - 4326423 - | L-lactate dehydrogenase (cytochrome) TERM 2222 4327059 - 4327083 + g 79 -13.5 -3.66732 | GATGTTCTTGAGCGT CGGCCTGGGCG GCG CGGTCAGGCCG TTCTTGAGATCCTTG Lcho_3860 4328584 - 4327664 - | LysR family transcriptional regulator TERM 2223 4328052 - 4328013 - G 80 -12 -4.15565 | gap 1 CGCAGCAGCGCAAAA CGCGCCA-GATCGGCCGGC TCG GCCGGCAGGCCGCAGCGCG CCAGCAGGCCGGGGC TERM 2224 4328704 - 4328734 + H 100 -14.1 -4.3255 | gap 1, opp_overlap 4328702 TCTGCTTCAGACAGT GCCTGCG-GAGGTT TCCA AGCCTCACGCAGGC TTTGTTGCTTGCACC Lcho_3861 4328818 - 4329195 + | ribosomal protein S12 Lcho_3862 4329358 - 4329828 + | ribosomal protein S7 TERM 2225 4329854 - 4329892 + F 90 -10.9 -4.33928 | overlap 4329857 CCGACCTTGACCCCT GACTGCCCCGTTCGGTC CGATC GACCGCCTGGGGCATTC TTTGTATTTGGAGTG TERM 2226 4329857 - 4329889 + F 88 -11.2 -4.27843 | overlap 4329854 ACCTTGACCCCTGAC TGCCCCGTTCGGTC CGATC GACCGCCTGGGGCA TTCTTTGTATTTGGA TERM 2227 4331685 - 4331670 - g 70 -4.6 -4.42238 | CGACTCGAACGAAAA CGCCTT CAAG ATGGCG GCGTCGATGGGCTTC Lcho_3863 4329913 - 4332015 + | translation elongation factor G TERM 2228 4332196 - 4332206 + F 85 -4.6 -5.055 | ACCTTAAACCGACAC GGGC ATT GCTC TTTTTTGGAGATTCG Lcho_3864 4332224 - 4333414 + | translation elongation factor Tu TERM 2229 4333425 - 4333446 + F 83 -17.3 -2.52464 | CGTAAGTGTGAACCT TGCGGGCGC CCTG GCGCCCGCA TCCGTTCGCGCAGCC Lcho_3865 4333495 - 4333806 + | ribosomal protein S10 TERM 2230 4333834 - 4333868 + T 100 -25.8 -5.4833 | opp_overlap 4333834 AACGCAGCACATCAA CCCCCTGAGCCAGCGC AAC GCGGTGGCTCAGGGGG TTTTTTCTTGCCTGG TERM 2231 4333868 - 4333834 - T 100 -25.8 -3.30214 | opp_overlap 4333834 AACGCAGCACATCAA CCCCCTGAGCCAGCGC AAC GCGGTGGCTCAGGGGG TTTTTTCTTGCCTGG TERM 2232 4334018 - 4334001 - T 100 -11.3 -5.86976 | opp_overlap 4334001 GCAGAAAACAAAAAA GCCAACC GGCT GGTTGGC TTTTTACGGACCTGA TERM 2233 4334001 - 4334018 + T 91 -11.3 -4.57569 | opp_overlap 4334001 GCAGAAAACAAAAAA GCCAACC GGCT GGTTGGC TTTTTACGGACCTGA TERM 2234 4334261 - 4334244 - T 100 -14.1 -5.03715 | ACGAGGGCGAAAAAA GGCCCGC CAAG GCGGGCC TTCAGACTGGCATCT Lcho_3866 4338542 - 4334319 - | DNA-directed RNA polymerase, beta' subunit TERM 2235 4334942 - 4334964 + g 70 -4 -4.4078 | overlap 4334945 4334947 CCTTGTTGACCACCT GGCCTTCGTG CAC CACGATGTTC TTTTCCTTGGGCACC TERM 2236 4334945 - 4334961 + g 73 -6.5 -4.32402 | overlap 4334942 4334947 TGTTGACCACCTGGC CTTCGTG CAC CACGATG TTCTTTTCCTTGGGC Lcho_3867 4342682 - 4338555 - | DNA-directed RNA polymerase, beta subunit TERM 2237 4339496 - 4339512 + g 80 -6.5 -4.63218 | overlap 4339484 GCAGTTCATCGCCCT GCGTGAG CTT CTTGCGC TTTTCTTCGAAGGCC TERM 2238 4342983 - 4342962 - R 100 -15.1 -4.49756 | CTTGAAACACCAAAA GGCCGGCCC CACA GGGCCAGCC TTGCAAGCAACTCGA Lcho_3868 4343397 - 4343023 - | ribosomal protein L7/L12 Lcho_3869 4343979 - 4343431 - | ribosomal protein L10 Lcho_3870 4344972 - 4344259 - | ribosomal protein L1 TERM 2239 4344934 - 4344945 + g 83 -7.2 -4.71482 | GGTGGTTTCGATCTT GCCC ACTT GGGC TTTTTGGCGTTTCGT Lcho_3871 4345405 - 4344974 - | ribosomal protein L11 Lcho_3872 4346125 - 4345559 - | NusG antitermination factor Lcho_3873 4346539 - 4346156 - | preprotein translocase, SecE subunit TERM 2240 4346598 - 4346626 + r 77 -16 -2.52464 | gap 1, opp_overlap 4346588 4346598 ACCAACAGCAGCAAA GCCCGCCGGGGCG AACA CGTCCCG-CGGGC TGCCTTGAGGCCAGG TERM 2241 4346626 - 4346598 - R 88 -13.8 -3.8505 | gap 1, opp_overlap 4346598, overlap 4346588 ACCAACAGCAGCAAA GCCCGCCGGGGCG AACA CGTCCCG-CGGGC TGCCTTGAGGCCAGG Lcho_3874 4347944 - 4346754 - | translation elongation factor Tu Lcho_3875 4349217 - 4348471 - | uracil-DNA glycosylase TERM 2242 4349062 - 4349037 - G 100 -13.3 -4.72272 | gap 1 GCTGGCGAGGAAAAA CCGGCGTGCCGG CAG CCA-CACGCCGG TCGACCTCGACGCAC Lcho_3876 4350013 - 4349225 - | indole-3-glycerol-phosphate synthase Lcho_3877 4351061 - 4350024 - | anthranilate phosphoribosyltransferase Lcho_3878 4351671 - 4351105 - | glutamine amidotransferase of anthranilate synthase Lcho_3879 4351966 - 4353159 + | type II secretion system protein TERM 2243 4354897 - 4354938 + G 70 -14.3 -3.14132 | gap 1 CTGGCCGGCGCACCG GCGCG-GCTGCTGCGCGAGG CGG CGGCGCGCAACGGCACGCGC TTCCTGCGCGAGGCC Lcho_3880 4353319 - 4355022 + | type II secretion system protein E Lcho_3881 4355003 - 4356361 + | hypothetical protein Lcho_3882 4356358 - 4356897 + | hypothetical protein Lcho_3883 4356894 - 4357514 + | hypothetical protein TERM 2244 4357775 - 4357720 - g 86 -18.8 -3.17212 | CGACCAGGTCATCAA CCGCCTGCTCGCGCTGGGCAGCGCCG AGTT CGGCGCCGGCCAGCTCGAACCCGCCG CGCGGGCTTGGGGCG TERM 2245 4359773 - 4359739 - g 70 -14.3 -3.16564 | gap 1 GGTCGACCCGATGAA CCGGCGACTGCCGATC GAGG GATCGGC-GCCGCTGG AGCTGACGTCACGGC Lcho_3884 4357511 - 4359793 + | type II and III secretion system protein Lcho_3885 4359790 - 4360275 + | hypothetical protein Lcho_3886 4360281 - 4360649 + | type II secretion system protein G Lcho_3887 4360643 - 4361437 + | hypothetical protein Lcho_3888 4362481 - 4361471 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2246 4361776 - 4361739 - G 74 -16.9 -2.52464 | opp_overlap 4361738 CCGCGGCCGAAGGGA TCGAGCGCGCCGCCCCA TTGG CGGGTCGGCGCGTCCGA GTGTGTGCGGGCCAG Lcho_3889 4364103 - 4362478 - | extracellular ligand-binding receptor Lcho_3890 4364799 - 4364113 - | electron transport protein SCO1/SenC TERM 2247 4364454 - 4364422 - G 82 -14.1 -3.78034 | opp_overlap 4364444 4364451 CAGCGAGACGAAGAA CACCTGCTTGCCGAA CAG CTCGGCCGGCAGGTG CTGGCGCACCTCGTT Lcho_3891 4365503 - 4364835 - | electron transport protein SCO1/SenC Lcho_3892 4367482 - 4365500 - | YVTN beta-propeller repeat-containing protein TERM 2248 4366783 - 4366811 + g 90 -16.7 -3.61398 | CCTCGGTGTCGATCA CGCTGACGCCGCT GTC GGCGCCGTCAGCG TTGTTGCCGACCCAG TERM 2249 4367556 - 4367526 - R 88 -17.6 -3.14564 | CCACCGCCGCATGAA GATGCGCCAGGCCC CCC GACCCTGGCGCATC CCATGTCCCCCCTCA Lcho_3893 4373622 - 4367572 - | hypothetical protein TERM 2250 4374766 - 4374781 + G 75 -6 -4.56597 | overlap 4374765 4374767 GAACTACCTGTTCAC CGCCGC GTTG GCGGCC TTTTTCGGCACCCGC Lcho_3894 4374212 - 4375540 + | histidine kinase Lcho_3895 4375550 - 4376098 + | two component Fis family transcriptional regulator Lcho_3896 4377610 - 4376123 - | 4-alpha-glucanotransferase Lcho_3897 4379097 - 4377610 - | anthranilate synthase component I TERM 2251 4378656 - 4378693 + g 70 -9.8 -3.83568 | gap 1 GCAGCAGGATCTCGG GCGTGCCGATGC-CGCC GGGCA GGCGCGTGTCGGCGAGC TTCTTCTCGATGTAG TERM 2252 4378771 - 4378732 - G 76 -17 -2.73364 | overlap 4378754 GTCGTAGCCGAAGTA GCCGGCCAGCCCGCCGCA GAAA CGCGGCAGGCCGGGCCGC AGCGCGACCTTGAAG Lcho_3898 4380096 - 4379431 - | phosphoglycolate phosphatase TERM 2253 4379626 - 4379649 + g 71 -8.8 -4.15044 | GAGCGCCTTGCAGGT CTCGATCAGC GGCA GCGGATCGGG TTTCTTGCGCGCGAA Lcho_3899 4380794 - 4380108 - | ribulose-phosphate 3-epimerase Lcho_3900 4380860 - 4381246 + | ApaG domain-containing protein Lcho_3901 4381243 - 4383327 + | putative site-specific recombinase transmembrane protein TERM 2254 4384462 - 4384438 - g 81 -17.9 -3.01712 | GTTCTTCCGCGAAGA GCCGATGCCCG ACC CGAGCATCGGC GCGATCGGCGCGCAG Lcho_3902 4383458 - 4384753 + | MltA domain-containing protein Lcho_3903 4385866 - 4384754 - | diguanylate cyclase Lcho_3904 4386473 - 4385913 - | AsnC family transcriptional regulator TERM 2255 4386381 - 4386430 + g 76 -9.1 -4.30014 | gap 1, opp_overlap 4386379 4386378, overlap 4386382 4386383 4386405 CGCGATGTCAAACCG GTCGAGACCGCCGGCGCGGCCCTC GGC GAGGCCTGCGTCAGGGG-CTCGGG TTTTCCCTTGATCCG TERM 2256 4386453 - 4386463 + g 70 -2.4 -4.50627 | overlap 4386452 TTGATCCGAGAATTG CGGC AAC GGCG TTTCTTTCATCAGTC TERM 2257 4387039 - 4387005 - g 72 -15.6 -2.71364 | overlap 4387013 GGACGTCTTCAAGCA CGCCAACATGGCCGGC ACC GCCCGCCACGGCGGCG TGCTGGCGATCGCCG TERM 2258 4387115 - 4387129 + G 76 -3.4 -4.63218 | ACCACATCTTCAAGG CCTGCG GGC TGCCGG TTTTCTTCCCGGCCA TERM 2259 4388540 - 4388517 - g 76 -8.8 -4.18018 | gap 1, overlap 4388501 CTGCGCCACCGAAAA GCGCCGCCGCC GCA AGCG-CGGCAC GCTGGTCGACCCGGC Lcho_3905 4386589 - 4390146 + | pyruvate ferredoxin/flavodoxin oxidoreductase Lcho_3906 4390434 - 4390165 - | translation initiation factor IF-1 Lcho_3907 4390921 - 4390661 - | hypothetical protein Lcho_3908 4391493 - 4391161 - | hypothetical protein Lcho_3909 4392440 - 4391493 - | glutathione synthetase Lcho_3910 4393670 - 4392489 - | aminoglycoside phosphotransferase TERM 2260 4392919 - 4392874 - G 72 -13.2 -3.53091 | gap 1, overlap 4392878 ACCGCGCCCTGGAAA TCGAGCACGCCGGGGTTCGGC GCCGG GCCGGCACCCGGCGC-CTCGA CCGGCGCGCAGACCA Lcho_3911 4393722 - 4396313 + | organic solvent tolerance protein Lcho_3912 4396310 - 4397704 + | SurA domain-containing protein Lcho_3913 4397712 - 4398521 + | dimethyladenosine transferase TERM 2261 4398575 - 4398557 - T 100 -13.1 -5.21709 | opp_overlap 4398557 4398570 GTCGAGACGAAAAAA GGCCCGC GCGTG GCGGGCC TTCCGTGCTGTCGAC TERM 2262 4398557 - 4398575 + T 72 -13.1 -3.11634 | opp_overlap 4398557, overlap 4398570 GTCGAGACGAAAAAA GGCCCGC GCGTG GCGGGCC TTCCGTGCTGTCGAC TERM 2263 4398678 - 4398696 + T 71 -11.8 -3.18681 | overlap 4398674 4398681 CGGCGTGTGCGGCGC GAATGCAG GCG CTGCATTC TTGCTCGGCTTGGGC Lcho_3914 4399177 - 4398782 - | hypothetical protein TERM 2264 4398912 - 4398855 - G 81 -17.7 -3.07344 | gap 1 GCATCTCTGAACACA TCGAGCAGCTGCTCACGCGCCTCGCGGT CGA ACCGCG-GGCTGTCGGGCAACTGCTCGA GAACGACGACAAAAC TERM 2265 4398973 - 4398927 - G 75 -5.7 -4.51699 | overlap 4398928 AGAACGACGACAAAA CCCGACTGGCTGCCCGACTTG TTGAC CAGATCGGTCATGCAGTCGTG CAGCGCATCCAGGTT TERM 2266 4399109 - 4399082 - G 80 -12 -4.12532 | gap 1 GTTGGCATAGAGAAA GT-GGTGGCCCAG ATC CTGGGCCGCCGAC AAGAGATCGTCCACT Lcho_3915 4399625 - 4399212 - | guanine-specific ribonuclease N1 and T1 TERM 2267 4399935 - 4399888 - R 81 -13.2 -3.6502 | overlap 4399889 CATGCGGCACTGAAA CGGCTGATCCGGTGCGGCGCCG TCCC CGACGCCGCACCGTGCCGTCCA GGATCAGCGCGTCGC TERM 2268 4399934 - 4399889 - R 77 -14.5 -2.78798 | overlap 4399888 ATGCGGCACTGAAAC GGCTGATCCGGTGCGGCGCCG TCCC CGACGCCGCACCGTGCCGTCC AGGATCAGCGCGTCG Lcho_3916 4402257 - 4399939 - | malate dehydrogenase TERM 2269 4402214 - 4402237 + g 85 -4.4 -4.91084 | gap 1, overlap 4402222 TCGTGATATTCGAGG GCGCTGCGGCG CAA CTCGGC-GCGC TTTTCTTCTTGAGTC Lcho_3917 4402478 - 4404610 + | PAS/PAC sensor signal transduction histidine kinase Lcho_3918 4404615 - 4405262 + | two component LuxR family transcriptional regulator TERM 2270 4405738 - 4405699 - g 72 -16.4 -2.79183 | overlap 4405704 CCGACGCGCATGAGA TCGAACTGGTCGGCGGTG ACAC CACCGCCGGCCCGCTCAA CCTGTGCATCACCGT TERM 2271 4405733 - 4405704 - g 73 -14.9 -3.14468 | overlap 4405699 GCGCATGAGATCGAA CTGGTCGGCGGTG ACAC CACCGCCGGCCCG CTCAACCTGTGCATC Lcho_3919 4405362 - 4406357 + | thiamine-monophosphate kinase Lcho_3920 4406354 - 4406911 + | phosphatidylglycerophosphatase A Lcho_3921 4406925 - 4407434 + | CinA domain-containing protein TERM 2272 4407477 - 4407461 - T 100 -15.1 -4.39571 | opp_overlap 4407461 TGCAGAAACGGAAAA GGCCGGC AGA GCCGGCC TTTCATCAGGTGCAT TERM 2273 4407461 - 4407477 + T 89 -15.1 -3.74872 | opp_overlap 4407461 TGCAGAAACGGAAAA GGCCGGC AGA GCCGGCC TTTCATCAGGTGCAT Lcho_3922 4407938 - 4407540 - | ribosomal protein L17 Lcho_3923 4409028 - 4408042 - | DNA-directed RNA polymerase, alpha subunit TERM 2274 4409156 - 4409129 - R 89 -18.4 -2.88249 | overlap 4409101 TACAGGCCGTAGACA CCGGCGCGCGGC ACTC GCCGCACACCGG CCAATCGATCAACGC Lcho_3924 4409788 - 4409165 - | ribosomal protein S4 TERM 2275 4409951 - 4409925 - R 95 -12.3 -4.37198 | gap 1, opp_overlap 4409943 AACTCAAATGGAAAA CCGGCGACGCAC GCAG GCGC-TCGCCGG ACAGCCGGGCATTAT Lcho_3925 4410411 - 4410007 - | ribosomal protein S11 Lcho_3926 4410807 - 4410442 - | ribosomal protein S13 Lcho_3927 4410956 - 4410843 - | ribosomal protein L36 Lcho_3928 4411231 - 4411013 - | translation initiation factor IF-1 Lcho_3929 4412566 - 4411256 - | preprotein translocase, SecY subunit TERM 2276 4412410 - 4412438 + g 70 -13.9 -3.14132 | opp_overlap 4412419 TGCCGCCCTGCTGAC CCTTGAACAGCTC CGC GAGCTGGTCAGGG TTGATCCCCGGGACA Lcho_3930 4413027 - 4412593 - | ribosomal protein L15 Lcho_3931 4413235 - 4413053 - | ribosomal protein L30 Lcho_3932 4413770 - 4413252 - | ribosomal protein S5 Lcho_3933 4414165 - 4413800 - | ribosomal protein L18 Lcho_3934 4414710 - 4414177 - | ribosomal protein L6 Lcho_3935 4415122 - 4414727 - | ribosomal protein S8 Lcho_3936 4415464 - 4415159 - | ribosomal protein S14 Lcho_3937 4416024 - 4415473 - | ribosomal protein L5 Lcho_3938 4416355 - 4416038 - | ribosomal protein L24 Lcho_3939 4416745 - 4416377 - | ribosomal protein L14 Lcho_3940 4418272 - 4416977 - | glutamate--cysteine ligase TERM 2277 4418369 - 4418350 - R 100 -16.4 -4.54727 | CGCCGCAAAGCAAAA GGGGCCGC ATCA GCGGCCCC TCCGGATCGGACAGC Lcho_3941 4419916 - 4418402 - | ammonium transporter Lcho_3942 4420277 - 4419939 - | nitrogen regulatory protein P-II TERM 2278 4421194 - 4421159 - g 75 -12.5 -3.59979 | gap 1, opp_overlap 4421174 4421176 CTGCGTGACGTCAAA GGCCAG-GCCGGCGCC AAGCG GGCGCTGGAGCTGGCC GCGGCCGGATCGCAC Lcho_3943 4420559 - 4422073 + | Mg chelatase, subunit ChlI TERM 2279 4422458 - 4422426 - g 76 -9.2 -4.18018 | gap 2, overlap 4422427 4422436 CTGGCTGATCGAAAA GGCCACCGAACTCGGC GCC GCCGAGATCG-TG-CC GACGATGTGCGAACG Lcho_3944 4422139 - 4422882 + | hypothetical protein TERM 2280 4423058 - 4423096 + F 100 -12.5 -5.0538 | opp_overlap 4423069 4423070 AAACTTGTTCAATGG GCATCCCGAAAGCACTG AGTCG CAGTGTTTCCGAGATGC TTTTTTAACCTCGGA Lcho_3945 4423121 - 4424995 + | phosphoenolpyruvate carboxykinase (GTP) TERM 2281 4425019 - 4425036 + T 100 -14.1 -5.09895 | ACTTCCGGCCCCGAA GCCCGCC CGAT GGCGGGC TTTTTTGCGTCCGTC Lcho_3946 4425320 - 4425078 - | hypothetical protein TERM 2282 4425863 - 4425823 - g 71 -14.9 -3.04144 | gap 3 GCTGCAGGCGGAACA CGCGC-TGGCCAGC--CTGC GGGT GCAGCCGCTGGCCACGCGCG ACCCCAGCCCGCTGC Lcho_3947 4425458 - 4426423 + | LysR family transcriptional regulator Lcho_3948 4428510 - 4426402 - | prolyl oligopeptidase TERM 2283 4426479 - 4426513 + g 76 -8.5 -4.30576 | gap 1, overlap 4426478 GGTGGGCGCGCTGTT CGTTGTCGGCCG-CGC CACC GTGACCGCCGGCGACG TTTTCGTAATACAGC Lcho_3949 4428989 - 4428507 - | hypothetical protein Lcho_3950 4430127 - 4429003 - | PhoH family protein Lcho_3951 4430271 - 4432148 + | histidine kinase Lcho_3952 4432276 - 4432944 + | two component LuxR family transcriptional regulator Lcho_3953 4433060 - 4433635 + | Holliday junction DNA helicase RuvA Lcho_3954 4433720 - 4434811 + | Holliday junction DNA helicase RuvB Lcho_3955 4435559 - 4434837 - | phosphoglycerate mutase TERM 2284 4435348 - 4435294 - G 75 -13.4 -3.5936 | overlap 4435286 4435285 TCGAAATCGCCGAAA TGGCGCTCGCGCAGACCCACGTCG GCCTGCA CGACCAGGCCCTGCGCGGCCGCCA CCGCCTCGGCGGTCT Lcho_3956 4435908 - 4435573 - | hypothetical protein Lcho_3957 4436756 - 4436031 - | phospholipid/glycerol acyltransferase Lcho_3958 4438078 - 4436753 - | putative dihydroorotase-like protein Lcho_3959 4439120 - 4438158 - | aspartate carbamoyltransferase Lcho_3960 4439629 - 4439120 - | phosphoribosyltransferase Lcho_3961 4440075 - 4439626 - | Holliday junction resolvase YqgF TERM 2285 4439731 - 4439692 - G 76 -16.5 -3.21099 | gap 2, overlap 4439678 TTGCTCCAGCAGCAA GGCCGCCGCCGC-CGC-AT CGGC ATCGCGTGCGCCGGCGGCC AGCACCTCGGTGGTG Lcho_3962 4440653 - 4440072 - | hypothetical protein TERM 2286 4441950 - 4441968 + G 79 -16 -3.38201 | overlap 4441948 GTGGGCGGCATCGAC CGGCTGCG ACG CGCAGCCG TATTTCCGCATCTTC Lcho_3963 4440691 - 4442226 + | deoxyribodipyrimidine photo-lyase Lcho_3964 4445311 - 4442204 - | acriflavin resistance protein TERM 2287 4442411 - 4442387 - G 70 -9.9 -3.72893 | CATCGGCGCACGAAA GCTCGGATCGG TGC CCCAGCCGAGC GCGATCGGCAACATG TERM 2288 4442636 - 4442612 - G 95 -15.7 -4.1899 | CGACGGCATCGAAAA CGCGCTGTTGG TCG CCAGCAGCGCG ACGAACGCGCCACCC TERM 2289 4443758 - 4443734 - G 100 -11.3 -5.26316 | CGAGCCGACAAAAAA CGCCGCCGCGC CCA GCACGGTGACG ATGCGGTGCCGCACC TERM 2290 4444034 - 4443983 - G 77 -6.4 -4.56597 | opp_overlap 4443991, overlap 4443986 GGCGGTCGGCAAAAA CACCGCGATCAGCGTGAAGGTGGT GGCG ATCACCGCCAGGCCGATCTCGTCG GCCGCCTCCATCGCC Lcho_3965 4446396 - 4445308 - | RND family efflux transporter MFP subunit TERM 2291 4446290 - 4446337 + g 70 -12.6 -3.31144 | gap 1 TGCGGCCATTCGGCC GGCTGCGGCGT-GACGGTGGTGA CGG TCAGCGCCGGCCGCGTCGCCGCC TTGTCGGCCTGCGCG TERM 2292 4446621 - 4446590 - R 86 -13.6 -3.72695 | gap 1, overlap 4446576 AGGCTCTCGAGGAAA CGCCG-GGCCGTCGC CAG GCGGCGGCCGCGGGG GTGCTCAGAACAGCT Lcho_3966 4447663 - 4446626 - | diguanylate cyclase TERM 2293 4447708 - 4447753 + r 71 -9.6 -3.74361 | opp_overlap 4447708, overlap 4447733 CGGCCGCTCAGGCAA CCGCGCGGCGCTGC-GCGCCGG CGTG CTGGCGCAGCAG-GCCCAGCAG TTCTTCCTCGCTGTA Lcho_3967 4454944 - 4447700 - | CheA signal transduction histidine kinase TERM 2294 4448444 - 4448426 - G 70 -9.5 -3.8211 | GCCGAGCCAGAAGAA CGGCAGC TGCAG GCCGCCG TAGCTGTAGCGGCCC TERM 2295 4451299 - 4451269 - G 71 -14.7 -3.04144 | gap 1 CCTCCAGCCGGAACA CCG-CGGCGCCGGT GCGG ACCGGCGCGGGCGG CTCATCAGGCTCGTC Lcho_3968 4457307 - 4454974 - | methyl-accepting chemotaxis sensory transducer TERM 2296 4457131 - 4457098 - G 73 -15.9 -2.91264 | GCGGGTATTGAGATA GCGCGAGGCGCCGCC CGAG GGCGACGCCTCGCTG ATGATCGCCGCGTCG Lcho_3969 4457892 - 4457362 - | CheW protein Lcho_3970 4458273 - 4457908 - | response regulator receiver protein TERM 2297 4458141 - 4458169 + g 93 -18.1 -4.09685 | GGTCGGGTTTTTCCT CGGCGATGCGGCG CAG CGCCTCGTCGCCG TTTTCGGCGGTGCGC Lcho_3971 4458790 - 4458353 - | response regulator receiver protein Lcho_3972 4458964 - 4458812 - | rubredoxin-type Fe(Cys)4 protein Lcho_3973 4459178 - 4460110 + | phosphomethylpyrimidine kinase type-1 Lcho_3974 4460151 - 4461464 + | glutamate-1-semialdehyde-2,1-aminomutase Lcho_3975 4461513 - 4462388 + | aldose 1-epimerase Lcho_3976 4463478 - 4462390 - | 6-phosphofructokinase TERM 2298 4464505 - 4464463 - g 70 -14.9 -2.86271 | overlap 4464460 CGGCGAGCACAACCA GCTCAACGCGCT-GGCCGCGA TCG CCGCGGCCGAGCACGT-GGGC GTCAGCCCGGCCGAC Lcho_3977 4463534 - 4464976 + | UDP-N-acetylmuramate TERM 2299 4465188 - 4465230 + G 70 -12.8 -3.28924 | gap 3, opp_overlap 4465186 4465185 CGGTGTCAAAGACTG GCCGGCCGACCGCAGC-GCCG TGAT CGGCAGCT-CGCTCGGC-GGC TTCTACGCCACCGTG Lcho_3978 4464979 - 4465602 + | hypothetical protein TERM 2300 4466179 - 4466154 - g 84 -10.4 -4.25104 | overlap 4466116 4466113 TCGGCTTCACCAAAA CCTGGAGCCG CGAGCT CGGCCCCAAG GGCGTGCGGGTCAAT Lcho_3979 4465655 - 4466395 + | short-chain dehydrogenase/reductase SDR TERM 2301 4466892 - 4466852 - g 79 -14 -3.60948 | gap 1 GAAGAGATCGTCAAA GCCGCGCTGCTGGGCATCG AGCG CAAGGCCCAGCAG-GCCGC GCAGATCGAGGGCTG TERM 2302 4467817 - 4467772 - g 71 -7 -4.25104 | gap 3, overlap 4467788 GGCCGGCCATGAAAA GATCGTGATC-AGCGA-ACGCCG CCG CGGCGCGCCGCTCGA-CACCATC GTCGCCGAGGCCATG Lcho_3980 4466435 - 4468552 + | ribonuclease II TERM 2303 4469108 - 4469070 - g 100 -19.4 -4.3129 | opp_overlap 4469071 4469106, overlap 4469053 CATCCAGCAGGAAAA CGCCCGGCCGCGCCGGCG CTT CGTCAGCCCGGCCGCGCG CGAGGGCGTGCACGC Lcho_3981 4468567 - 4469457 + | TonB family protein Lcho_3982 4469483 - 4470286 + | monofunctional biosynthetic peptidoglycan transglycosylase Lcho_3983 4470331 - 4470957 + | hypothetical protein Lcho_3984 4470954 - 4471541 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2304 4471769 - 4471808 + F 74 -14.9 -2.52896 | TGGGGTGTCCACGCT GCGCCCAGCGGTGTCGG CCATGA CCGACACCGCCCGGCGG TGCATTGACGGGTCG Lcho_3985 4471907 - 4472362 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein Lcho_3986 4472373 - 4473728 + | acetyl-CoA carboxylase, biotin carboxylase Lcho_3987 4473752 - 4474657 + | ribosomal protein L11 methyltransferase Lcho_3988 4474679 - 4476004 + | Zinc finger-domain-containing protein Lcho_3989 4476588 - 4476082 - | redoxin domain-containing protein TERM 2305 4476461 - 4476479 + g 70 -2.2 -4.49958 | opp_overlap 4476452 4476457, overlap 4476462 GGCAAAGCGAAGATC GCGACGGT CTT GCCGGCGG TTTCTTTCGTCACGT TERM 2306 4476668 - 4476642 - R 100 -8.7 -6.02919 | gap 1, opp_overlap 4476642 CGAGAAACAAAAAAA CCGGCA-GCCAG TATT CCAGCGTGCCGG TTCAAGTGCAGCCGG Lcho_3990 4477025 - 4476729 - | ribosomal protein S17 Lcho_3991 4477222 - 4477025 - | ribosomal protein L29 Lcho_3992 4477653 - 4477237 - | ribosomal protein L16 TERM 2307 4477587 - 4477612 + g 86 -7.5 -4.78572 | opp_overlap 4477577 4477578, overlap 4477586 AGACATTGGCACCGC GGGTGGCGACA CCCG TGTTGCGGCCC TTTTGTTCCTTACGG Lcho_3993 4478514 - 4477657 - | ribosomal protein S3 TERM 2308 4478086 - 4478137 + g 80 -11.7 -4.12188 | gap 2, overlap 4478065 GCCCTGCGCGCCCAG GCGCATCGCGTTCTGCATCGCGC GCTTCATG GCGCG--GCGGAACATGATGCGC TTTTCGAGCTGCTGG Lcho_3994 4478862 - 4478533 - | ribosomal protein L22 TERM 2309 4478701 - 4478716 + g 73 -10.4 -3.75024 | overlap 4478672 TTCGGCGTTCGCGAT GGCGCT TTCG AGCGCC TTCTTGATGATGCCG Lcho_3995 4479150 - 4478875 - | ribosomal protein S19 TERM 2310 4479178 - 4479208 + r 72 -8.4 -3.95324 | CTCTTATTACTTCTT GCG-ACGCGAGACG ATGAA CGTCT-GCGTGCGC TTGTTGTTGCGGGTG Lcho_3996 4479993 - 4479169 - | ribosomal protein L2 Lcho_3997 4480319 - 4479993 - | ribosomal protein L25/L23 Lcho_3998 4480936 - 4480316 - | ribosomal protein L4/L1e Lcho_3999 4481616 - 4480936 - | ribosomal protein L3 TERM 2311 4481951 - 4481914 - R 100 -20.7 -3.01712 | opp_overlap 4481920, overlap 4481920 TCGGGCGCCCCAATA CAAAAAGCCCCGAGCAC CAAA GTGCGCGGGGCTTTTCG TCATGAAAAACGTGT TERM 2312 4481945 - 4481920 - R 100 -16.1 -5.0916 | opp_overlap 4481920, overlap 4481914 GCCCCAATACAAAAA GCCCCGAGCAC CAAA GTGCGCGGGGC TTTTCGTCATGAAAA TERM 2313 4481920 - 4481945 + r 100 -16.1 -4.30576 | opp_overlap 4481920 4481914 GCCCCAATACAAAAA GCCCCGAGCAC CAAA GTGCGCGGGGC TTTTCGTCATGAAAA Lcho_4000 4482914 - 4482192 - | two component Fis family transcriptional regulator Lcho_4001 4485246 - 4482922 - | histidine kinase Lcho_4002 4485843 - 4485274 - | hypothetical protein Lcho_4003 4487370 - 4486009 - | sun protein TERM 2314 4486068 - 4486042 - G 100 -8.6 -5.60993 | overlap 4486044 CCGGGCATAAAAAAA GCCGTCGCCAGC GAC GCTGGCAACCTC CCCGGCCTGGGCCGG TERM 2315 4486807 - 4486845 + g 73 -9.4 -3.9122 | overlap 4486783 4486808 GACGCGCAAGGCCAT CGGCGCGTGCTGGTTGGC GGC GCCGAGCAGCGCCTGCCA TTGTTTGGGCCAGTC Lcho_4004 4488327 - 4487398 - | hypothetical protein TERM 2316 4488115 - 4488073 - G 76 -11.9 -3.86346 | gap 1, overlap 4488112 GCATTCCTCGACAAA GGCCT-GACGCTCGCGCGCG CTGC CGGGCGTGAGCAGCAAGGCC AGCAGCAGCGCGCGC Lcho_4005 4489028 - 4488468 - | LemA family protein TERM 2317 4488635 - 4488591 - G 71 -9.1 -4.10161 | overlap 4488592 GACCAGCCGCGAAAA GGCGATCTGCTCCTGCAGCGC ATC ACGCTGGCGCAGCAGGTCGCT GACGACCGGGTCGGG Lcho_4006 4489766 - 4489059 - | exsB protein Lcho_4007 4491102 - 4489783 - | gamma-glutamyl phosphate reductase Lcho_4008 4492149 - 4491109 - | UDP-glucose 4-epimerase Lcho_4009 4492286 - 4492804 + | hypothetical protein Lcho_4010 4492859 - 4494427 + | 2-polyprenylphenol 6-hydroxylase TERM 2318 4494635 - 4494652 + G 74 -4.1 -4.56775 | gap 1 GCTGAGCACCTGCCC GGC-CTGC GGC GCAGAGTC TTTTTCGAAACAGCT Lcho_4011 4494546 - 4494872 + | FmdB family regulatory protein Lcho_4012 4494916 - 4495575 + | hypothetical protein Lcho_4013 4495669 - 4497465 + | aspartyl-tRNA synthetase TERM 2319 4497506 - 4497539 + F 95 -17.5 -3.86897 | opp_overlap 4497513, overlap 4497510 4497513 GCGCCGCGCGCTCGT TGCACAAGGCCGGTC GATT GACCGGCCTTGTTCG TTTATGGCCCGTCAC TERM 2320 4497510 - 4497535 + F 100 -19.1 -3.6053 | opp_overlap 4497513, overlap 4497506 4497513 CGCGCGCTCGTTGCA CAAGGCCGGTC GATT GACCGGCCTTG TTCGTTTATGGCCCG TERM 2321 4497513 - 4497532 + F 91 -15 -3.93401 | opp_overlap 4497513, overlap 4497510 4497506 GCGCTCGTTGCACAA GGCCGGTC GATT GACCGGCC TTGTTCGTTTATGGC TERM 2322 4497532 - 4497513 - f 83 -15 -3.28712 | opp_overlap 4497513 4497510 4497506 GCGCTCGTTGCACAA GGCCGGTC GATT GACCGGCC TTGTTCGTTTATGGC Lcho_4014 4497629 - 4498549 + | UbiA prenyltransferase TERM 2323 4498974 - 4499014 + G 77 -6.8 -4.56597 | gap 2, overlap 4499001 CCGCGCGAGCATCTG CAGCATGTCTGGCTGCCGTG GCG CGAGGCGGCC-GACC-GCTG TTTTTCGCCGAGCAA Lcho_4015 4498584 - 4499075 + | NUDIX hydrolase Lcho_4016 4499072 - 4499902 + | endonuclease/exonuclease/phosphatase Lcho_4017 4499902 - 4501257 + | phospholipase D/transphosphatidylase Lcho_4018 4502222 - 4501347 - | HtpX domain-containing protein Lcho_4019 4503076 - 4502417 - | hypothetical protein Lcho_4020 4504244 - 4503210 - | dihydroorotase, homodimeric type TERM 2324 4503801 - 4503791 - G 76 -8.2 -4.25104 | overlap 4503792 CCTGGTCGATGAAAA CCGC CTC GCGG TCGAACACGTCGACC TERM 2325 4503960 - 4504002 + g 75 -15.5 -3.36327 | gap 1, overlap 4503949 CAGCTTGAGCGCCAC CACGCCGGCCGCCTGGG-CG CGCA CGATCTCGTCGGCCGGCGTG TTGTCGGTCAGGTAG Lcho_4021 4505021 - 4504287 - | ABC transporter-related protein Lcho_4022 4505699 - 4505034 - | polar amino acid ABC transporter, inner membrane subunit Lcho_4023 4506439 - 4505696 - | polar amino acid ABC transporter, inner membrane subunit TERM 2326 4506478 - 4506459 - R 91 -16.4 -3.53012 | GTTCTCCTCGTGAAA CGCGGCCC GCAC GGGCCGCG CTCTCAAACGCTGCG Lcho_4024 4507401 - 4506505 - | extracellular solute-binding protein Lcho_4025 4508549 - 4507599 - | LysR family transcriptional regulator Lcho_4026 4510430 - 4508571 - | ABC transporter-related protein Lcho_4027 4510466 - 4510933 + | thioesterase superfamily protein Lcho_4028 4511764 - 4510922 - | hypothetical protein TERM 2327 4511308 - 4511348 + g 73 -13.9 -3.29144 | GCACCGTGTAGCGCA CCTTGGCGCGGTGCTTGGC GTG GCTGCGCACGGCGTCGAGG TTGTGCAGCCACTGG Lcho_4029 4512643 - 4511879 - | enoyl-CoA hydratase/isomerase TERM 2328 4512730 - 4512696 - R 82 -6.3 -4.77036 | gap 1, overlap 4512699 GCTGACGACCAAAAA GAAGCCGCCGC-ACCC GCAA GGGTTACGGCGGCCGG TCGAACCGAGCGTCA TERM 2329 4512727 - 4512699 - R 100 -14.6 -4.49314 | gap 1, overlap 4512696 GACGACCAAAAAGAA GCCGCCGC-ACCC GCAA GGGTTACGGCGGC CGGTCGAACCGAGCG Lcho_4030 4513942 - 4512743 - | acetyl-CoA acetyltransferase TERM 2330 4513138 - 4513185 + g 71 -14.9 -3.02144 | ACTGCCGCACCGCGC GCTCGCTGGCCAG-GATCAGCGC ACCG GCGCCG-TCGCTGGTCTGCGAGC TGTTGCCGGCGGTGA TERM 2331 4513309 - 4513353 + g 78 -18.6 -2.62184 | gap 1 TGCGCGTGCGCACCT CGCCGGT-GGCGAGGTCGGGC GTGC GCTCGATCACGTCGACCGGCG TGATCTCGGCGCCGA Lcho_4031 4516362 - 4513957 - | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 2332 4515965 - 4515941 - G 70 -9.9 -3.86897 | opp_overlap 4515960 TGGATGCCGCAGAAA CGCGGCCGG ATCGCCG CCGGCAGCG CGTCGCTCAGCTTGG Lcho_4032 4518194 - 4516404 - | acyl-CoA dehydrogenase domain-containing protein Lcho_4033 4518934 - 4518275 - | TetR family transcriptional regulator Lcho_4034 4519120 - 4519677 + | HNH endonuclease Lcho_4035 4519804 - 4520283 + | 17 kDa surface antigen Lcho_4036 4520571 - 4520332 - | hypothetical protein Lcho_4037 4521245 - 4520742 - | hypothetical protein TERM 2333 4521149 - 4521112 - G 75 -12.8 -3.58343 | GCGACGAGCGGGAAA GCCCGCACCG-GCACGAC GCCG GT-GTGCACGGTGCCGGC AGCGTCGGTGTAGAC Lcho_4038 4523435 - 4521255 - | ABC transporter-related protein TERM 2334 4523920 - 4523966 + G 82 -13.8 -3.72695 | gap 2 CGGCTGACGGCGATG CTGCCGGCGCTGGTCGAGCACC ACTGC GGTG-TCGGCGAGCGC-GGCGG TTTCCTGCAGCGGCT TERM 2335 4525705 - 4525680 - g 72 -12.5 -3.52896 | opp_overlap 4525671 4525696, overlap 4525698 CGACGACGGACAGAA CGCCGCGCTGC GCGA ACACCGCGGCG CGGGCGGGCGGGCGG Lcho_4039 4523758 - 4525941 + | cyanophycin synthetase TERM 2336 4526655 - 4526626 - g 73 -10.5 -3.75437 | AAGGACCTGAGCAAA CGCCTGCTCGCCG CCGC CGGCGTGCCGGTG CCGATCGGCCGGCCG Lcho_4040 4525990 - 4528587 + | cyanophycin synthetase Lcho_4041 4528621 - 4529529 + | protein of unknown function zinc metallopeptidase putative TERM 2337 4529650 - 4529695 + T 78 -13.9 -3.28416 | overlap 4529627 GGTTTCTTCGACCAG CGCGGCGTTCTGCTGGGTCGA CTGA TCGAGCTGGCCGAGCGCGGCG TTGATCTGGCTGGTG Lcho_4044 4532135 - 4530201 - | methyl-accepting chemotaxis sensory transducer TERM 2338 4530300 - 4530345 + g 73 -13.9 -3.28416 | overlap 4530277 GGTTTCTTCGACCAG CGCGGCGTTCTGCTGGGTCGA CTGA TCGAGCTGGCCGAGCGCGGCG TTGATCTGGCTGGTG TERM 2339 4533014 - 4532971 - g 74 -2.3 -4.71426 | gap 2, overlap 4532974 4532977 CGGCGAGGAAGAAAA GAAGATCCGCCAGGACCCGGT CGCC ACCGG--CCAGGCGATCCTGC AGTCGGTCTTCGGTG TERM 2340 4533010 - 4532974 - g 74 -4.5 -4.46587 | gap 3, overlap 4532971 4532977 CGAGGAAGAAAAGAA GATCCGCCAGGACCCGGT CGCC ACCGG--CCAGGCG-ATC CTGCAGTCGGTCTTC Lcho_4045 4532324 - 4533043 + | hypothetical protein Lcho_4046 4533556 - 4533056 - | redoxin domain-containing protein Lcho_4047 4533768 - 4535240 + | glutamyl-tRNA(Gln) amidotransferase, B subunit Lcho_4048 4535933 - 4535262 - | hypothetical protein Lcho_4049 4536625 - 4535930 - | orotate phosphoribosyltransferase Lcho_4050 4536641 - 4537429 + | exodeoxyribonuclease III Xth Lcho_4051 4537492 - 4538628 + | protein of unknown function UPF0052 and CofD Lcho_4052 4538822 - 4539487 + | hypothetical protein Lcho_4053 4539528 - 4540166 + | beta-lactamase domain-containing protein TERM 2341 4540361 - 4540307 - g 73 -15.8 -2.87132 | CTGCCGCTGCAGACA GCGCCCGAGACGCGGCCAG-TCG-TGCG CGC CGCAGCGTGCTGGCCG-G-CGCGGGCGC GCTGCTGCTGGCCGG Lcho_4054 4540240 - 4540833 + | hypothetical protein Lcho_4055 4540844 - 4542181 + | type VI secretion protein Lcho_4056 4542212 - 4543594 + | DotU family type IV/VI secretion system protein TERM 2342 4543870 - 4543836 - g 70 -13.5 -3.17212 | gap 1, overlap 4543837 CGAGCAGCTGATGAA GCCCGCCGCCGG-CGG TGCG CCGGCCGGCAGCGAGT CACCCGACGTGGCCG TERM 2343 4543869 - 4543837 - g 74 -17 -2.50113 | gap 1, overlap 4543836 GAGCAGCTGATGAAG CCCGCCGCCGG-CGG TGCG CCGGCCGGCAGCGAG TCACCCGACGTGGCC TERM 2344 4545753 - 4545805 + G 70 -15.4 -2.88544 | gap 1, overlap 4545728 CGGGCCGGCCGCGGC GCTGGTGTTCGC-GCGCGCCAGCGG CGCC CCGCTGACGCGCGGCGTGCCCGGGC TCTATACGCGTGACG Lcho_4057 4543591 - 4547253 + | type VI secretion protein IcmF Lcho_4058 4547278 - 4547973 + | hypothetical protein Lcho_4059 4547985 - 4549958 + | serine/threonine protein kinase TERM 2345 4550707 - 4550681 - g 72 -12.3 -3.61398 | gap 2, overlap 4550682 GGCTCCGGCCAAGAA GGTCGCCGCGCGC AAG GC-CGCGGCG-CC GAAGCCCTGAAGCGC Lcho_4060 4550007 - 4550717 + | peptidase M15A Lcho_4061 4551104 - 4550724 - | glyoxalase/bleomycin resistance protein/dioxygenase Lcho_4062 4551744 - 4551142 - | OmpA/MotB domain-containing protein Lcho_4063 4552508 - 4551741 - | protein serine/threonine phosphatase TERM 2346 4551974 - 4552014 + g 70 -15.3 -2.98545 | overlap 4551955 4551971 CGGCCGCGCTGGTGT GCGGCTCGACGTGTTCGGC CAT GCCGAGCGCGGCCAGCAGC TGGTTCTTGTGCGGG Lcho_4064 4554256 - 4552514 - | FHA domain-containing protein TERM 2347 4553658 - 4553613 - G 79 -7.3 -4.58395 | gap 1 CCCAGCCCGGAAAAA CCCGCCAGCGGGCCCGCCGATG CCG CCCCGGGCCGCCCG-TGGCTGG CGACGGGCGCAGGAG TERM 2348 4553729 - 4553687 - G 85 -19 -3.05463 | overlap 4553709 AGCGGGCGCACCGAA GCCGGTGAAGCCGGCGAACG GAT CGGCCGCCGGCGCCACCGCC GGGCCGGGCGCGCCC TERM 2349 4553765 - 4553709 - G 71 -16.5 -2.52795 | gap 3, overlap 4553687 AAGCCGGCGAACGGA TCGGC-CGCCGGCGCCACCGCCGGGCCG GGCG CGCCCTGGC-GCGGCGC-GGCGGGCCGC ACCACCGCCGGGCCG TERM 2350 4554575 - 4554544 - g 71 -6.5 -4.26076 | gap 2, overlap 4554547 4554552 GGACTCCCATGAAAA CGACCACACTGCGCG TCAT CGCGCTG-GCGG-CG GCCACGGTGCTTGCA Lcho_4065 4554537 - 4555172 + | hypothetical protein Lcho_4066 4556816 - 4555185 - | serine/threonine protein kinase TERM 2351 4555522 - 4555488 - G 72 -11.5 -3.6682 | gap 2 GGTGATCGATGCAAA GCTCG-GCTCCA-GGCC GCT GGCCGCGAAGCCCGAGC CCGGGCCGCCGGGGC TERM 2352 4556057 - 4556025 - G 73 -14.7 -3.14344 | opp_overlap 4556027 CAGGTCCTGCATGAA CAGCGCGGCGCTGGC GTA GCGGGCGTCGCGCTG CTTGGCCAGCGCGCG TERM 2353 4556027 - 4556055 + g 72 -15.9 -2.70932 | opp_overlap 4556025 GGTCCTGCATGAACA GCGCGGCGCTGGC GTA GCGGGCGTCGCGC TGCTTGGCCAGCGCG Lcho_4067 4557706 - 4556834 - | sensor protein Lcho_4068 4558019 - 4557822 - | hypothetical protein Lcho_4069 4562034 - 4558033 - | PAS/PAC sensor hybrid histidine kinase TERM 2354 4559671 - 4559694 + g 87 -8.8 -4.8622 | GCTGGGCAGGCGGTC GGTGTCGAGC ACCA GCTCGAGGCC TTTTTCGTTGGCCGA Lcho_4070 4562267 - 4563682 + | TrkA domain-containing protein Lcho_4071 4563703 - 4565160 + | cation transporter Lcho_4072 4566525 - 4565176 - | hypothetical protein Lcho_4073 4567652 - 4566531 - | hypothetical protein Lcho_4074 4568465 - 4567656 - | hypothetical protein Lcho_4075 4569064 - 4568465 - | hypothetical protein TERM 2355 4568635 - 4568649 + g 78 -8.5 -4.42386 | overlap 4568626 TCACCAGGCGCCTGA CCGCC TTGAT GGCGG TTTTCTGGATGCGCC Lcho_4076 4569821 - 4569075 - | hypothetical protein Lcho_4077 4570995 - 4569808 - | hypothetical protein Lcho_4078 4571467 - 4571006 - | hypothetical protein Lcho_4079 4571971 - 4571480 - | hypothetical protein Lcho_4080 4574291 - 4571976 - | type VI secretion system Vgr family protein Lcho_4081 4575758 - 4574388 - | methyltransferase type 12 TERM 2356 4575323 - 4575357 + g 79 -12.9 -3.79906 | overlap 4575314 4575313 4575323 GCGACTGCGCGGCGG CC-CAGCGCCGCTGCAC CTT GTGCAGCG-CGCCGAGG TTGTTGTGCAGGTCG Lcho_4082 4576696 - 4575815 - | hypothetical protein Lcho_4083 4577921 - 4576776 - | hypothetical protein Lcho_4084 4580693 - 4577943 - | type VI secretion ATPase TERM 2357 4579520 - 4579533 + g 74 -8.1 -4.21908 | CCTCGTCGAGGATCT GCACC TGGT GGTGC TTTTCCATCGTGCTG TERM 2358 4579556 - 4579577 + g 80 -6.6 -4.72986 | gap 1 TCGTGCTGGCGACGC CGCG-CATC ATCAG GATGGCGCG TTTTTCATCCGGCTC Lcho_4085 4581831 - 4580698 - | type VI secretion protein Lcho_4086 4583773 - 4581857 - | type VI secretion protein Lcho_4087 4584324 - 4583770 - | type VI secretion system lysozyme-related protein Lcho_4088 4584871 - 4584347 - | Hcp1 family type VI secretion system effector Lcho_4089 4585401 - 4584916 - | hypothetical protein TERM 2359 4585519 - 4585553 + r 73 -9.9 -3.85698 | gap 1, opp_overlap 4585513, overlap 4585520 TTGCAGGAACCCGCT CCCGCC-GAGGTGCGG CGGG CCGCGCCTCAGGCCGA TTTCTGCGACGGCAG Lcho_4090 4587041 - 4585545 - | EvpB family type VI secretion protein Lcho_4091 4587569 - 4587063 - | type VI secretion protein Lcho_4092 4588656 - 4587619 - | ImpA family type VI secretion-associated protein Lcho_4093 4591622 - 4588782 - | filamentous haemagglutinin outer membrane protein TERM 2360 4591420 - 4591390 - G 73 -9.6 -3.91897 | opp_overlap 4591385 4591408, overlap 4591391 GCGCCGATCGAGAAA TCGCGCCACTCG ATGTAGG CGCGTGGCGCGC TCTCGTTCTGCACGA Lcho_4094 4593270 - 4591633 - | polypeptide-transport-associated domain-containing protein TERM 2361 4591769 - 4591792 + g 70 -13.1 -3.28712 | opp_overlap 4591759 4591762 4591761 AAGAACACGCCCAGC CCGGCGGCG CGCAGC CGCCGCTGG TTGTCGACGCCCGCC Lcho_4095 4595456 - 4593267 - | TPR repeat-containing protein TERM 2362 4595559 - 4595522 - R 74 -11.1 -3.57418 | gap 1, overlap 4595518 CAGTGACGAAAGTAA GCCGCGCCGG-TCCGGGC CTG GCCCGACGCCGGTCCGGC CGCAACCGGTCAGTC Lcho_4096 4597383 - 4595569 - | histidine kinase TERM 2363 4595969 - 4595944 - G 73 -11.1 -3.85698 | gap 1 GCGCGCCTCGACAAA CGGCGCCGG-CA GCG TGTCCGCCGCCG CGGTGGCGTCCTCGA TERM 2364 4596395 - 4596358 - G 86 -17.7 -3.28712 | gap 1, overlap 4596359 GCCGCCGGCCGAGAA GCGCAGGCCCAGGCCGAG CTC CTCGGCCT-GGCCGGCGA AATGCATGTGCAGGC TERM 2365 4596394 - 4596359 - G 88 -21.2 -2.57132 | gap 1, overlap 4596358 CCGCCGGCCGAGAAG CGCAGGCCCAGGCCGAG CTC CTCGGCCT-GGCCGGCG AAATGCATGTGCAGG TERM 2366 4596844 - 4596786 - G 79 -16.6 -3.06492 | gap 2 CGAGCCAGCCGAACA GGCTGACCGCGCCCGCCA-G-CGCCACG CCGGC CGCGGCGACCCGGCGGTCGGGGCCCGCC AGCGCGATCGCCGTG TERM 2367 4597198 - 4597140 - G 85 -20.3 -2.64616 | gap 2 GCGCCAGCCAGACCA GCAGCAGCACGAC-GGC-GACGCCGGCCA GCC CGGCCAGCGCCCGCCCGCCCTGCGGCTGC AGCCGCCCCGTCACG Lcho_4097 4598107 - 4597388 - | two component LuxR family transcriptional regulator TERM 2368 4597626 - 4597606 - G 75 -16.1 -3.03159 | GGAAGCGCGGGAACA GCGCCGCAC TCG GCGCGGCGC TGCGGCTCTCGCGTT Lcho_4098 4598436 - 4599083 + | LuxR family transcriptional regulator Lcho_4099 4599129 - 4599842 + | Crp/FNR family transcriptional regulator TERM 2369 4600124 - 4600138 + GF 72 -12.8 -3.14132 | CTGGAGCTGCTGCCG GCGCCG ATC CGGCGC TTCCTGCACGCCAGC TERM 2370 4601488 - 4601446 - gf 74 -13.3 -3.28712 | gap 1, overlap 4601399 CGTCGGCCGCGACAA GGAGCTGGCGCGGCTGCGCG CGCA CTGGC-GCCACGCCAGCGCC GGCCAGTGCCTGGCG TERM 2371 4602445 - 4602493 + GF 73 -12.5 -3.36273 | gap 3 GGGGCTGGCGCTGCT GGTGC-GCGCCGGCCTGCTGATCC CCAA GGG-CAGCGGGCCGG-GCAGCAGC TTCCTGTTCAAGCAC Lcho_4100 4599893 - 4604026 + | tetratricopeptide TPR_4 TERM 2372 4604681 - 4604624 - gf 100 -26.9 -2.82516 | overlap 4604601 TCGCCGACCACCAGA GCCTGGCCGGCACCGGCACCGGCACCG GCAC CGGCACCGGCGCCGACGCCGACGCGGC CGTGCCGGTGGACGT TERM 2373 4604960 - 4604995 + GF 80 -15.4 -2.87132 | gap 1 TGGCCGGCACCGGCA CCGAGCTGCGCCAGGCG GTG CGGCTGGCGCAGG-CGG TGTGTGCGCCGGCCG TERM 2374 4605302 - 4605356 + GF 74 -14.9 -2.55351 | gap 1, overlap 4605301 TCGGCCAGTACCTGA TCGAGCCGCTGCTGGTGC-GCATCAC CGCC GAGGTGCTGCGCCTGCCGGGGCTCGA CTTCGTCTGGAACGA Lcho_4101 4603978 - 4605924 + | hypothetical protein TERM 2375 4606730 - 4606767 + G 93 -21.4 -3.02511 | CTTCCGCGACGGCTG CTTCGGCGTGCTGCGC AAGATG GCGCAGCACGTCGAGG TGTTCGAGGCCTGGG Lcho_4102 4605921 - 4607405 + | peroxidase Lcho_4103 4607402 - 4609459 + | patatin Lcho_4104 4610483 - 4609533 - | peptidase M48 Ste24p TERM 2376 4609900 - 4609942 + g 76 -17.1 -2.78816 | gap 1, overlap 4609909 TGCGTGGCCGCCGTC TTGCCCATGCGCT-CGCGGG CGTG TTCGCGCAGCGCATGGGCCA TCTCGTGGCCCATGA Lcho_4105 4612182 - 4610539 - | major facilitator transporter TERM 2377 4611797 - 4611775 - G 83 -5.4 -4.84359 | CGAGGCCGACAAAAA CGCCACCGTC ACC GCCAGCAGCG CGAACACCTGCACCG Lcho_4106 4612249 - 4612761 + | flavin reductase domain-containing protein Lcho_4107 4612860 - 4613285 + | thioredoxin Lcho_4108 4614108 - 4613254 - | orotidine 5'-phosphate decarboxylase Lcho_4109 4614772 - 4614131 - | hypothetical protein Lcho_4110 4616052 - 4614769 - | ATPase-like protein TERM 2378 4615157 - 4615173 + g 88 -4.4 -5.12971 | TGCAGTTCAATGTAC CGGGAA CGATC TTCCTG TTTTTCTTGCGTCTT Lcho_4111 4617450 - 4616077 - | adenylosuccinate lyase TERM 2379 4616387 - 4616411 + g 75 -15.7 -3.01712 | CTGTCGTAGCCGAGC TGGGCGTAGCC GAC GGCCACGCCCA TGTTGCGCAGCACGG Lcho_4112 4617930 - 4617532 - | hypothetical protein Lcho_4113 4620486 - 4618081 - | multi-sensor hybrid histidine kinase Lcho_4114 4621643 - 4620510 - | two component regulator propeller domain-containing protein Lcho_4115 4622749 - 4621676 - | two component regulator propeller domain-containing protein TERM 2380 4621870 - 4621846 - G 74 -4.9 -4.5442 | gap 1, overlap 4621847 4621848 TGCCGAACCAGAAAA CGCC-GGCGC GGTCCT GCGCCAGGCT GTAGACGATGTTGCC Lcho_4116 4623120 - 4622746 - | cytochrome c class I TERM 2381 4623032 - 4623064 + g 81 -15.6 -3.56837 | gap 2, overlap 4623024 GCGATCAGCAGCCAG GGCGCCGCCGTCGAGC CCC GC-CGGCG-CGGCGCC TTCTCATCTTTGGCA Lcho_4117 4624578 - 4623181 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 2382 4624181 - 4624195 + g 76 -9.2 -4.25104 | CCGCCCAGCACCAGG CTGCGC AGG GCGCGG TTTTCCTCGCGCAGG Lcho_4118 4626087 - 4624594 - | sensor protein TERM 2383 4626291 - 4626343 + G 70 -13.1 -3.34962 | GACCGCGATCCGGCT GCTCGAGCCGCTGGCGCGCTCGGGC GAT GCGCTGGCGCAGCTGCGGATCGGGC TTCTGCACTATCACG TERM 2384 4626641 - 4626616 - g 72 -11.8 -3.63073 | CAGAGCCCGGAAGAA GCCGCGCGCT GGATCG AGCGCGCCGC CGCCCAGGGCCATGC Lcho_4119 4626166 - 4626693 + | Sel1 domain-containing protein Lcho_4120 4627374 - 4626775 - | TPR repeat-containing protein Lcho_4121 4628195 - 4627371 - | cytochrome c assembly protein Lcho_4122 4629222 - 4628188 - | hypothetical protein Lcho_4123 4631822 - 4629219 - | hypothetical protein Lcho_4124 4632901 - 4631822 - | NHL repeat-containing protein TERM 2385 4632490 - 4632524 + g 76 -8.4 -4.25104 | overlap 4632491 CGAAGTTGAGCAGCC CGGCGGCGCGCTCC CACAGCT GCAGCTCGCCGCCC TTTTCATCGAACACG Lcho_4125 4633947 - 4632928 - | NHL repeat-containing protein TERM 2386 4633389 - 4633435 + g 70 -12.9 -3.36327 | gap 1, overlap 4633390 CGGCCAGCAGCAGCG TGCCGCCGCCGTCGGCGAGCGT GAAG GCGGCCGTCGA-GGTGGCGGCG TTGTCGGTGCGGTAG TERM 2387 4633916 - 4633897 - G 76 -9.2 -4.18018 | CGCCGCCAGCGAAAA CGCCCGCA GCGC TGCGCGCG CCAACGCCTGTCGAA Lcho_4126 4634360 - 4633968 - | hypothetical protein Lcho_4127 4634956 - 4634357 - | hypothetical protein Lcho_4128 4635865 - 4634966 - | tetratricopeptide TPR_4 TERM 2388 4635412 - 4635422 + g 70 -2.4 -4.46615 | overlap 4635408 CGTCCTGCGCCTCGC GGCC GGC GGAC TTTTCCTTCGTGATG Lcho_4129 4636758 - 4635862 - | tetratricopeptide TPR_4 Lcho_4130 4637807 - 4636755 - | cytochrome c class I Lcho_4131 4638300 - 4637818 - | hypothetical protein Lcho_4132 4640316 - 4638361 - | hypothetical protein Lcho_4133 4641436 - 4640357 - | PpiC-type peptidyl-prolyl cis-trans isomerase Lcho_4134 4642329 - 4641445 - | cytochrome c family protein Lcho_4135 4643663 - 4642557 - | NHL repeat-containing protein TERM 2389 4643577 - 4643527 - G 79 -13.2 -3.83026 | gap 3, opp_overlap 4643556, overlap 4643555 CGCTCGTAGATGAAA CGCGGCTCGTCGG-GCGGCGGCGGG AACA CCAGCGGCCGCGCCG-CG-GCGGCG GTGTTGGGCGCGGGC Lcho_4136 4643685 - 4644545 + | cytochrome c class I TERM 2390 4644667 - 4644638 - g 77 -11.3 -4.09243 | overlap 4644627 4644639 GACACGTCGGCAAAA GCCGAGGCCGAGG CCCG CCACGAGCTCGGC CGCAAGGTCTACAAC Lcho_4137 4644587 - 4645549 + | cytochrome c class I Lcho_4138 4645763 - 4646236 + | hypothetical protein TERM 2391 4646309 - 4646282 - T 100 -19.8 -3.06696 | opp_overlap 4646282 CGGCGCCCGAACACA GGCCCCGGCGTG GTGA CGCGCCGGGGCC TTTTCCTTCTGGGGC TERM 2392 4646282 - 4646309 + T 100 -22 -4.48987 | opp_overlap 4646282 CGGCGCCCGAACACA GGCCCCGGCGTG GTGA CGCGCCGGGGCC TTTTCCTTCTGGGGC Lcho_4139 4647261 - 4646332 - | SARP family transcriptional regulator TERM 2393 4647156 - 4647143 - G 70 -9.5 -3.72695 | ACCCGCGGCACGAAA CCGCC GGGT GGCGG CCGCAGCTCGGGCTG Lcho_4140 4648125 - 4647394 - | cyclic nucleotide-binding protein Lcho_4141 4649279 - 4648152 - | serine-pyruvate aminotransferase Lcho_4142 4649882 - 4649412 - | integron integrase TERM 2394 4649990 - 4649976 - R 72 -2.9 -4.59773 | GTCCATCCCGAAAAA TTTAG GCTGT CTAAA TCGACTTGACCATCC Lcho_4143 4650940 - 4650053 - | integrase catalytic region Lcho_4144 4651236 - 4650937 - | transposase IS3/IS911 family protein TERM 2395 4651769 - 4651758 - H 70 -2.2 -4.63044 | overlap 4651726 4651759 AGCCATATAAATAAA TGCC AAAA GACA CCGCTTCAGGCTCCA Lcho_4145 4651908 - 4652888 + | hypothetical protein Lcho_4146 4653151 - 4653306 + | hypothetical protein TERM 2396 4654382 - 4654411 + G 70 -4.3 -4.3953 | gap 1, overlap 4654393 CTTGCTTCCGCCTCT CACGCTTG-GGGAG CGG TTCCCGCAATTGTG TTTCTTCTGCTTCCC TERM 2397 4654684 - 4654702 + G 87 -6.6 -5.03994 | TGGCGGGCTACTTGG CGCCGTGC ATG GCATTGCG TTTTTCTATCTAAAC Lcho_4147 4654283 - 4654783 + | hypothetical protein Lcho_4148 4654808 - 4655101 + | hypothetical protein TERM 2398 4655272 - 4655234 - f 78 -7.5 -4.41047 | gap 2, opp_overlap 4655235 4655237 4655238, overlap 4655238 4655239 4655260 ATCCGTCAAGCAAAA CCAACCCCTGACGAATTGC GCA GCAATTCGCCTGGGA--GG TCTTGATTCAAATCC TERM 2399 4655270 - 4655238 - f 89 -14.9 -3.75718 | opp_overlap 4655238 4655237 4655235, overlap 4655234 4655239 4655260 GTCAAGCAAAACCAA CCCCTGACGAATTGC GCA GCAATTCGCCTGGGA GGTCTTGATTCAAAT TERM 2400 4655269 - 4655239 - f 80 -16.2 -2.84708 | opp_overlap 4655238 4655237 4655235, overlap 4655238 4655234 4655260 TCAAGCAAAACCAAC CCCTGACGAATTGC GCA GCAATTCGCCTGGG AGGTCTTGATTCAAA Lcho_4149 4655391 - 4655555 + | transposition helper protein Lcho_4150 4655613 - 4656104 + | transposase IS3/IS911 family protein Lcho_4151 4656101 - 4657144 + | integrase catalytic region TERM 2401 4657440 - 4657459 + G 76 -11.4 -3.76482 | gap 1, opp_overlap 4657435 TGCGCAAGGACCAGG CGCTGGCCG AGA CGGCC-GCG TTGTTGGTGCTGTCA TERM 2402 4657492 - 4657480 - g 83 -3.3 -5.00616 | GGTGCTGTCAAAAAA GCTCG AGG CGATC TTCCACAAGGACGAG Lcho_4152 4657232 - 4657516 + | transposition helper protein Lcho_4153 4657513 - 4658604 + | integrase catalytic region TERM 2403 4659312 - 4659258 - T 84 -12.9 -3.73775 | opp_overlap 4659258 GTCATGTGCATGAAA CCCGAGCACGGTGTGCATGCACA AAAAGGCCA TGTCCATGCACACCGCGTGCAGG TTGCTCATGCAGACC Lcho_4155 4659898 - 4659368 - | UspA domain-containing protein Lcho_4156 4660866 - 4659895 - | integral membrane protein TerC Lcho_4157 4661383 - 4660877 - | putative universal stress protein UspA TERM 2404 4661501 - 4661486 - H 79 -2.4 -5.0133 | overlap 4661494 CATCGTCCGAAAAAA CGGAAC ATTC GCGCCG CCCGCGGGTCGACCT Lcho_4158 4661533 - 4662462 + | LysR family transcriptional regulator Lcho_4159 4662561 - 4663448 + | activator of Hsp90 ATPase 1 family protein Lcho_4160 4663464 - 4663919 + | glyoxalase/bleomycin resistance protein/dioxygenase Lcho_4161 4663916 - 4664308 + | hypothetical protein Lcho_4162 4664510 - 4664319 - | hypothetical protein TERM 2405 4664438 - 4664469 + g 73 -13.7 -3.39327 | opp_overlap 4664419 GCATGAGCTGATAGC CCACGCCCAGGCC GCAATA GGCCTTGGTGTGG TTCTCGCTGTCGGAC Lcho_4163 4664630 - 4665040 + | hypothetical protein Lcho_4164 4666003 - 4665071 - | LysR family transcriptional regulator TERM 2406 4665683 - 4665663 - G 79 -12.5 -3.73775 | TGCAGCGCCATGAAA CGCGGCACC AGC GGCGCCACG TGGCGGCGCCCGAAC TERM 2407 4666017 - 4666055 + H 100 -11.8 -4.59376 | ATGGGGTGCGTGGGC GTGGGTTGATTCGTGCAT CCA GTGCACGAATCCATGCAC TTTTGCTTTGGTAAT Lcho_4165 4666101 - 4666820 + | haloacid dehalogenase, type II Lcho_4166 4666887 - 4669091 + | malate synthase G TERM 2408 4669115 - 4669134 + T 100 -16.4 -4.90266 | ATCACCGCATGACGA CGGCGCCC TGCG GGGCGCCG TTTTTACTTCGTGCG Lcho_4167 4671876 - 4669138 - | type III restriction protein res subunit TERM 2409 4671434 - 4671416 - G 70 -10.2 -3.83205 | opp_overlap 4671408, overlap 4671417 ACCGGCGAGAGCAAA TCGCCCAG CGC CTGGGCGC GCTCCTCGTAGTTGT Lcho_4168 4672973 - 4671873 - | hypothetical protein Lcho_4169 4674631 - 4672970 - | DNA methylase N-4/N-6 domain-containing protein TERM 2410 4673936 - 4673912 - G 73 -7 -4.37092 | AGTCTCTCTAGAAAA GCTCCAACCG CGACT CGGTGGGGGC ACCACTGATCGACCA Lcho_4170 4676357 - 4674642 - | hypothetical protein TERM 2411 4675221 - 4675234 + g 70 -2.3 -4.56775 | GATGTAGGTAACGCC CTCTG ACTG CAGCG TTTTTCGCCAAGACT TERM 2412 4675578 - 4675551 - G 70 -5 -4.43477 | gap 1, overlap 4675554 4675576 GTTATTGAAGTAAAA GAACTTTGAAGCA TCG TTCTTCAAAG-TC AACGCCATGCTTTCG TERM 2413 4675576 - 4675554 - G 76 -7.8 -4.33004 | overlap 4675551 ATTGAAGTAAAAGAA CTTTGAAGCA TCG TTCTTCAAAG TCAACGCCATGCTTT TERM 2414 4675838 - 4675824 - G 81 -12.8 -3.92522 | GCCGAACCGCACAAA CCGCGC CCT GCGCGG TGCGATGGCATTCAC Lcho_4171 4679200 - 4676357 - | helicase domain-containing protein TERM 2415 4676608 - 4676627 + g 79 -5.6 -4.63527 | overlap 4676609 CACGATCGATTTCCT TGACCTCG TTTT CGAGGCCG TTTTTCAGATCGTCG Lcho_4172 4679690 - 4679313 - | hypothetical protein Lcho_4173 4679798 - 4681000 + | Bcr/CflA subfamily drug resistance transporter Lcho_4174 4681031 - 4681342 + | hypothetical protein Lcho_4175 4684594 - 4681343 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 2416 4683364 - 4683338 - G 70 -13.6 -3.17075 | opp_overlap 4683341 CCCCCCGGAACCGAA GGCGCGCACGGC GCT GTCGTGCGTGCC GCGATGGTCCTCGGG Lcho_4176 4685001 - 4684615 - | response regulator receiver protein Lcho_4177 4686476 - 4685004 - | PAS/PAC sensor signal transduction histidine kinase TERM 2417 4685037 - 4685091 + g 86 -18.6 -3.36327 | opp_overlap 4685034, overlap 4685074 CAGGCTGAAGCAGCT GC-CGCGGCCCGCCTCGCTGCGCACG TCGAT CGTGC-CACCGAGCAGGGCCGCGAGC TTCTGGCTCAGGTGC TERM 2418 4686618 - 4686588 - R 89 -18.3 -3.17075 | CGTTCGTCAAGCGAA CCGGCCGACACCC CTGCC GGGTGTCGGCCCG CGATGTCAGGACGGC Lcho_4178 4687313 - 4686624 - | OmpA/MotB domain-containing protein Lcho_4179 4688457 - 4687483 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 2419 4689564 - 4689523 - g 76 -15.9 -3.14132 | opp_overlap 4689559 CGGGCCCGCGACGAA GCGGGCGACCGGC-TCGGC CCGCGT GCCGATGCCGG-CGCGCGC GAGGGCTTCGAGGGC Lcho_4180 4688500 - 4689822 + | putative RNA methylase Lcho_4181 4689913 - 4690245 + | hypothetical protein Lcho_4182 4690684 - 4690250 - | glyoxalase/bleomycin resistance protein/dioxygenase Lcho_4183 4692200 - 4690722 - | transcriptional regulator Lcho_4184 4692352 - 4692690 + | hypothetical protein Lcho_4186 4693779 - 4693411 - | hypothetical protein Lcho_4185 4692741 - 4693466 + | pseudouridine synthase Lcho_4187 4694427 - 4693870 - | hypothetical protein Lcho_4188 4694601 - 4695059 + | carboxymuconolactone decarboxylase TERM 2420 4695237 - 4695194 - g 81 -13 -3.88291 | overlap 4695228 4695229 GACGACGCCCAGAAA GCGGCGGAGACGGCGGCAAC GACC GTCACCACAACCGCCGCCGC CACGCCGGCAGCGGC TERM 2421 4695254 - 4695228 - g 73 -13.6 -3.41051 | overlap 4695194 4695229 CGACCGTCACCACAA CCGCCGCCGCCA CGC CGGCAGCGGCCG CACCCGAGGCGGCAC Lcho_4189 4695137 - 4695559 + | hypothetical protein TERM 2422 4695606 - 4695572 - T 84 -16.5 -2.87564 | gap 1, opp_overlap 4695564 4695566 4695564 TGAGCCGGCCAGACA GCG-GCTCTCGGGCTT GTTC AGGCCCGAGAGCACGC GGATCAGCTTCTCGA Lcho_4190 4695998 - 4695666 - | hypothetical protein TERM 2423 4695888 - 4695856 - G 72 -3.1 -4.4891 | GTGACGATCACAAAA CCGGACTCCAAGGCG TAG CGCCAGACGGCCCGG TCGTCTGCCGCGCCC Lcho_4191 4696225 - 4695995 - | hypothetical protein Lcho_4192 4702065 - 4696258 - | excinuclease ABC, A subunit TERM 2424 4700766 - 4700791 + g 71 -8.9 -4.07568 | overlap 4700769 TGAAACGTTTGGCCG GTGGCAGACCG AGGT CGGCCTGCTGC TTTTCACCCAAGCGC TERM 2425 4700974 - 4700999 + g 89 -5.3 -5.09426 | CCACTTGCCAGTCCA GTTGGGCGAGC CGTC GATCACCCAGC TTTTTTGCGATTCGC TERM 2426 4702063 - 4702074 + g 70 -2.2 -4.56597 | overlap 4702068 CGCGTTCTGACCGGG CATG GTGG CGTG TTTTTCGAGGGGGAA Lcho_4193 4702557 - 4702369 - | hypothetical protein TERM 2427 4702901 - 4702925 + G 77 -15 -3.53012 | gap 1, opp_overlap 4702915 CCCGCGCGTCTGGGG CGGCGCCGAGG ACAG CC-CGGCGCCG TTTGCCAGCGGCAAG Lcho_4194 4702704 - 4703369 + | yecA family protein Lcho_4195 4703366 - 4703893 + | hypothetical protein TERM 2428 4704058 - 4704098 + F 80 -12.4 -3.78775 | opp_overlap 4704054, overlap 4704080 4704085 CCCCAGAGACAGCTT CCTGCCAGCGCCGCCGCA CCCCA TCCGGCCGCGCGCGCAGG TTTCGTGCTGCCGGG TERM 2429 4704441 - 4704402 - g 70 -13.5 -3.18681 | gap 1, opp_overlap 4704401, overlap 4704403 CCTCAATTCGAGCAA GGGCCCGGCCGTGCGCGC CACCC GCGCGCA-GGCCGACCGC ATCCTCTACAAGGCC Lcho_4196 4704139 - 4706196 + | glucose inhibited division protein A Lcho_4197 4706186 - 4706842 + | methyltransferase GidB Lcho_4198 4706951 - 4707562 + | lysine exporter protein LysE/YggA TERM 2430 4707717 - 4707694 - g 71 -8.9 -4.05714 | gap 1, overlap 4707710 4707713 ATCGCCAACCAGAAA GGTGG-CGTC GGCAA GACGACCACC ACCGTCAACCTGGCC Lcho_4199 4707661 - 4708431 + | cobyrinic acid ac-diamide synthase Lcho_4200 4709523 - 4708432 - | beta-lactamase domain-containing protein TERM 2431 4709128 - 4709083 - G 87 -6.5 -5.00616 | gap 1, overlap 4709085 GTGGCTGGCAAAAAA CGCC-GCCGCCGCCTCGCCGCC GAA GCCGGTGGTGCGGGTGCTGGCG ATGCGCGCGGCGTTC Lcho_4201 4709609 - 4710058 + | MerR family transcriptional regulator Lcho_4202 4710164 - 4710628 + | thioesterase superfamily protein Lcho_4203 4710724 - 4711386 + | carbonate dehydratase Lcho_4204 4711396 - 4713207 + | (isocitrate dehydrogenase (NADP(+))) kinase Lcho_4205 4713228 - 4714415 + | acetyl-CoA acetyltransferase Lcho_4206 4714439 - 4715152 + | lysine exporter protein LysE/YggA Lcho_4207 4715179 - 4716309 + | acyl-CoA dehydrogenase domain-containing protein Lcho_4208 4716816 - 4716334 - | hypothetical protein Lcho_4209 4717803 - 4716868 - | restriction endonuclease Lcho_4210 4721252 - 4717920 - | multi-sensor hybrid histidine kinase Lcho_4211 4721818 - 4721306 - | hypothetical protein TERM 2432 4721732 - 4721750 + g 73 -13.8 -3.34398 | overlap 4721730 GGCGGTCCAGCCGTT GTCGCGCC ACA GGCGCGGC TCTTTCACGGCGGCG Lcho_4212 4724101 - 4721828 - | PAS/PAC sensor signal transduction histidine kinase Lcho_4213 4724963 - 4724109 - | putative periplasmic binding protein TERM 2433 4724774 - 4724788 + g 81 -2.7 -5.00884 | GGCCGATCTTGAGCT GCAGC TTGAC GCCGC TTTTTTCGGACACGT TERM 2434 4724943 - 4724914 - G 74 -4.1 -4.52589 | gap 1, overlap 4724915 GGCGTGCAGAGAAAA GCGGC-CGCCAGCC AGA GGCCGATGCGCCGA AGAAGGTCGTGCAGA TERM 2435 4725003 - 4725059 + r 81 -14.4 -3.48593 | gap 2, opp_overlap 4725003 CAAAGCGATGCAGAA GGAGCGACGCCACGGCCAGCG-TCA-CC CCC GGATGATCGCTGGTCGCGCCGTCTCGCC TTCTATCGGCGGCTG TERM 2436 4725059 - 4725003 - R 88 -15.8 -3.38564 | gap 1, opp_overlap 4725003 CAAAGCGATGCAGAA GGAGCGACGCCACGGCCAGCG-TCACC CCCG GATGATCGCTGGTCGCGCCGTCTCGCC TTCTATCGGCGGCTG Lcho_4214 4726369 - 4725110 - | polyhydroxyalkanoate depolymerase, intracellular Lcho_4215 4726506 - 4727168 + | glutathione S-transferase domain-containing protein Lcho_4216 4727600 - 4727184 - | cupin 2 domain-containing protein TERM 2437 4727554 - 4727533 - G 76 -3 -4.62441 | gap 2 CGGTAGAGAAAGAAA TCGCGCAGGC CGTC GCC-GCG-GA ACACCGTGTCCATCG Lcho_4217 4727729 - 4728646 + | ATPase BadF/BadG/BcrA/BcrD type Lcho_4218 4728679 - 4729797 + | N-acetylglucosamine-6-phosphate deacetylase Lcho_4219 4729975 - 4731087 + | TRAP dicarboxylate transporter- DctP subunit TERM 2438 4731123 - 4731161 + F 79 -10.2 -4.07568 | overlap 4731127 CGGGACTCGCGTTCC TACGTCAGCCATCCGGGC CCC GTCCGGATGGCTGATTCC TTTTGAGCAGGCCAC TERM 2439 4731127 - 4731157 + F 100 -22 -3.66908 | overlap 4731123 ACTCGCGTTCCTACG TCAGCCATCCGGGC CCC GTCCGGATGGCTGA TTCCTTTTGAGCAGG Lcho_4220 4731180 - 4731803 + | tripartite ATP-independent periplasmic transporter DctQ TERM 2440 4732432 - 4732471 + G 81 -2.8 -5.0133 | gap 2, overlap 4732435 GATCGTCTACGGCGC CACCGCCGGCGTGTCGGT GGTCAA GCTG-TACGCCGG-GGCG TTTTTTCCCGGCCTC TERM 2441 4733002 - 4732944 - g 88 -20.9 -2.61452 | gap 1, overlap 4732905 4732943 ACGACCTGAAGGAAC CGGCCGGCGCAGCCCCGGCCACGGCACC CGTC GCTGCCGCAGCCGAAGCGCCGCCGGC-G CCCGAGCGTGTGCCG Lcho_4221 4731800 - 4733821 + | TRAP C4-dicarboxylate transport system permease DctM subunit Lcho_4222 4734464 - 4733841 - | hypothetical protein TERM 2442 4734114 - 4734086 - G 70 -13.8 -3.20841 | overlap 4734084 AGATGTAGACGAACA GGTGGTGCGGCA GCAGG CGCCGCACCGCC GCACCCAGCCCGAGC TERM 2443 4734912 - 4734963 + G 81 -8.4 -4.56597 | opp_overlap 4734886 GTTCTGGTGGCTCGA CGCCACCGATCCGGCGCGCGCC ACCGACTG GGCCCGTGCCGGTCTGCGGGCG TTTTTCACCCGCGGC Lcho_4223 4734610 - 4735215 + | DSBA oxidoreductase Lcho_4224 4735521 - 4735237 - | hypothetical protein Lcho_4225 4737406 - 4735796 - | RNA polymerase, sigma 54 subunit, RpoN Lcho_4226 4738232 - 4737426 - | ABC transporter-related protein TERM 2444 4738150 - 4738203 + g 72 -12.4 -3.50853 | gap 3, overlap 4738165 TTTTCGAGGCCGTCG GCT-TCG-AGCCGGCTC-GACGCGCCG TTG CGGCCCGCCCGGGCCGGCTGCGCCAGC TTCTCGTTCGCCGGG Lcho_4227 4738864 - 4738229 - | lipopolysaccharide transport periplasmic protein LptA TERM 2445 4738960 - 4738938 - R 77 -12.7 -3.35679 | GGCCCGCAGTGACAA CGGCCCGGA ACCTG TCCAGGCCG GTCTGGCGCCCGATC Lcho_4228 4739672 - 4739007 - | DSBA oxidoreductase Lcho_4229 4740351 - 4739710 - | sporulation domain-containing protein TERM 2446 4740331 - 4740317 - G 70 -2.7 -4.4648 | opp_overlap 4740317 4740318 ATGCCCAGCACAAAA CCGCC GCGTT GGCCG TTGCGTTGCGTCTTC Lcho_4230 4742065 - 4740380 - | arginyl-tRNA synthetase TERM 2447 4741882 - 4741901 + g 75 -12.8 -3.61398 | GCGCCTCGACCAGCG CCTGCGCG AGTT CGCGCGGG TTCTTGCGCAACGGC Lcho_4231 4742204 - 4743538 + | cyclic nucleotide-binding protein Lcho_4232 4743677 - 4743955 + | putative signal peptide Lcho_4233 4744047 - 4744487 + | hypothetical protein Lcho_4234 4744612 - 4745691 + | VanZ family protein Lcho_4235 4745688 - 4746083 + | ferredoxin-like protein Lcho_4236 4746093 - 4746710 + | hypothetical protein Lcho_4237 4746863 - 4748032 + | Serine-type D-Ala-D-Ala carboxypeptidase TERM 2448 4748459 - 4748439 - g 78 -18.3 -2.62983 | TCTACCTGCAGATCA CGCGTGGCG TGG CGCCACGCG CCCATCCGATGCCGG Lcho_4238 4748123 - 4749034 + | aminotransferase class IV Lcho_4239 4749061 - 4749336 + | hypothetical protein Lcho_4240 4749567 - 4749358 - | hypothetical protein Lcho_4241 4750474 - 4749716 - | integral membrane protein TERM 2449 4750324 - 4750307 - G 70 -12.7 -3.37796 | GGCCAGCACCCAGAA GCGCTGG TGCG CCAGCGC CAGCAGCAGCCAGCC Lcho_4242 4750704 - 4751555 + | metal-dependent hydrolase HDOD Lcho_4243 4752096 - 4751566 - | hypothetical protein TERM 2450 4752064 - 4752032 - G 85 -9 -4.68724 | TCAGGCAACAGAAAA GCCGCCGCGGCCAG GACGA CCAGCAGCAGCAGC AGTGCCTTGATGACG Lcho_4244 4753149 - 4752166 - | putative lipase transmembrane protein Lcho_4245 4753607 - 4753188 - | nuclear protein SET TERM 2451 4753774 - 4753795 + H 80 -14.5 -3.14132 | opp_overlap 4753759, overlap 4753763 GTCCCGCTGCCCACA GGGTTTGCC AGCC GGCAAACCC TTGATCGGGAAGACC Lcho_4246 4754392 - 4757106 + | GCN5-related N-acetyltransferase TERM 2452 4757106 - 4757158 + F 88 -16.2 -3.41587 | overlap 4757134 CACCCAGGCGCTCTG AGCCGCGGCCAGGGCGCG-CGCGGCG ATA CGCCGCGGTGCG-CCTGGCCGTACCG TTGCGTTTTGTCCGG TERM 2453 4757134 - 4757163 + F 83 -9.2 -4.38712 | overlap 4757106 GCGCGCGCGGCGATA CGCCGCGGTGCG CCTGGC CGTACCGTTGCG TTTTGTCCGGGTCGA Lcho_4247 4757232 - 4758209 + | hypothetical protein TERM 2454 4759656 - 4759636 - g 77 -4.6 -4.72272 | overlap 4759637 CTGGCCGATGAAAAA CCGCTCGC AGCCG ACGAGCGC CTGATCGAGCTGGCG Lcho_4248 4758202 - 4759860 + | hypothetical protein Lcho_4249 4760079 - 4759861 - | hypothetical protein Lcho_4250 4761189 - 4760158 - | isocitrate dehydrogenase (NAD(+)) Lcho_4251 4762174 - 4761317 - | phosphatidylserine decarboxylase Lcho_4252 4762315 - 4762626 + | protein of unknown function DUF883 ElaB Lcho_4253 4762687 - 4763076 + | putative transmembrane protein Lcho_4254 4763073 - 4763504 + | hypothetical protein Lcho_4255 4763956 - 4763525 - | hypothetical protein Lcho_4256 4764421 - 4764026 - | hypothetical protein TERM 2455 4765414 - 4765385 - g 82 -12.7 -4.1021 | overlap 4765360 GGCGAGAAGCAGAAA GCCGCCGGCGCCC GCCA GCGCGCCGATGGC CTGTGGGTCTACCGC Lcho_4257 4764629 - 4767652 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent Lcho_4258 4767652 - 4768050 + | PilT domain-containing protein TERM 2456 4768048 - 4768085 + T 84 -13.6 -3.63744 | gap 2, overlap 4768049 4768052 GCCCAATTGCTGACT TGACGCGGTCGGCAGGGA TCAG TCCCTGCCGAT-GCG-CA TCTTTTCCACCGGGA TERM 2457 4768049 - 4768087 + T 95 -16.1 -4.07568 | gap 1, overlap 4768048 4768052 CCCAATTGCTGACTT GACGCG-GTCGGCAGGGA TCAG TCCCTGCCGATGCGCATC TTTTCCACCGGGACG TERM 2458 4768052 - 4768084 + T 81 -16.4 -2.78032 | gap 1, overlap 4768048 4768049 AATTGCTGACTTGAC GCG-GTCGGCAGGGA TCAG TCCCTGCCGATGCGC ATCTTTTCCACCGGG Lcho_4259 4768293 - 4768066 - | AbrB family transcriptional regulator TERM 2459 4768493 - 4768481 - g 87 -3.3 -5.14563 | overlap 4768482 CTCGCCATGAAAAAA CGCCA GCT CGGCA GCAGCCACCTCGAAG Lcho_4260 4768472 - 4769455 + | aldo/keto reductase Lcho_4261 4769457 - 4770284 + | excinuclease ABC subunit C Lcho_4262 4771121 - 4770291 - | hypothetical protein TERM 2460 4770863 - 4770835 - G 82 -13.1 -4.07885 | CACTGCGCGGCAAAA CACAGCTCGGCCA CGG TGGCCACGCTGCG CCCGACGATGACGGT TERM 2461 4772032 - 4772071 + G 83 -7.7 -4.65895 | gap 1 GATGCGGCCCGGCCG GTGC-CCGATGCGCCGCT CGGCA AGCGGCGCCCCGAAGCGC TTTTTGCCTGGGCCG Lcho_4263 4771198 - 4772229 + | hypothetical protein Lcho_4264 4773155 - 4772223 - | hypothetical protein Lcho_4265 4773286 - 4773417 + | hypothetical protein Lcho_4266 4774676 - 4773453 - | RND family efflux transporter MFP subunit TERM 2462 4773724 - 4773668 - G 75 -15.8 -3.04144 | overlap 4773621 CCGGCAGCGGGAACA CCGCGCTCACCGGCACGCGCAGCA CCGCGCTCT CGCTGCGCGTGACGATGCGCACGC CCACGCGGTAGCCGT Lcho_4267 4777066 - 4774685 - | hypothetical protein TERM 2463 4774960 - 4775018 + g 70 -9.6 -3.78934 | gap 4, overlap 4774961 4775003 CCTCGGCGCGCGTGA AGCCCAGCA-CGCGCAGGCTG-GC-CAGCT CCC AGGTGCGCTCGGCCAGCGCGATGC-GGGCG TTGTTGTAGACCACG TERM 2464 4775566 - 4775607 + g 85 -20.2 -2.52464 | gap 1, opp_overlap 4775543 ACTCGGTCATCGTCA CGCCCGGTGC-GCGCGCCA GCTCG TGGCGGGCCGCATCGGGCG TGGCTTCGAGCAGCC Lcho_4268 4777799 - 4777083 - | ABC transporter-related protein Lcho_4269 4778766 - 4777873 - | LysR family transcriptional regulator Lcho_4270 4778928 - 4779677 + | short-chain dehydrogenase/reductase SDR Lcho_4271 4779722 - 4780714 + | TRAP dicarboxylate transporter, DctP subunit TERM 2465 4780727 - 4780759 + F 100 -21.9 -2.71144 | opp_overlap 4780715 TGAGCTGATCGGAGT GACGGCCCGGGCGCC CGT GGCGCCCGAGCCGCC TCATTGAGGAGACTG Lcho_4272 4780777 - 4781304 + | tripartite ATP-independent periplasmic transporter DctQ Lcho_4273 4781329 - 4782588 + | TRAP dicarboxylate transporter, DctM subunit Lcho_4274 4782621 - 4783484 + | transketolase domain-containing protein Lcho_4275 4783481 - 4784497 + | transketolase central region Lcho_4276 4784614 - 4785885 + | O-acetylhomoserine/O-acetylserine sulfhydrylase Lcho_4277 4786141 - 4785896 - | hypothetical protein TERM 2466 4786079 - 4786056 - G 75 -12.4 -3.59979 | gap 1 GCGCCGCAGTGGAAA CCGCCGC-CGC AGC GCGCGCAGCGG TCGTCCAGGGCTGCG Lcho_4278 4786796 - 4787323 + | putative phosphohistidine phosphatase, SixA TERM 2467 4787774 - 4787755 - g 77 -15 -3.53531 | CTACGAAGACGACAA GGCCGACC TCGC GGTCGGCC CGACCAGCTCGGGCG TERM 2468 4787874 - 4787832 - g 73 -14.9 -3.1478 | gap 1, overlap 4787830 AGCAGTTCAGGAAGA TC-CTGGTGGTCGAGCCGGC GGTG GCCGACTCGATCACCGGCGA GAAGTGGAACCGCTA Lcho_4279 4787414 - 4788661 + | extracellular ligand-binding receptor Lcho_4280 4788753 - 4790942 + | putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane TERM 2469 4791370 - 4791318 - g 85 -20.7 -2.52543 | opp_overlap 4791318 AGCGCTCGCAACGCA GCGGCC-GCGCCGAACTGGTCACGC CCGAC GCG-GCCCAATTCAGCGCCGGCCGC TTCGTCATCGTGCAA TERM 2470 4791318 - 4791370 + G 76 -16.3 -3.23216 | opp_overlap 4791318 AGCGCTCGCAACGCA GCGGCC-GCGCCGAACTGGTCACGC CCGAC GCG-GCCCAATTCAGCGCCGGCCGC TTCGTCATCGTGCAA Lcho_4281 4790987 - 4792531 + | histidine kinase TERM 2471 4792618 - 4792653 + G 73 -10.3 -3.86015 | CTGATCGCCACCGTC GGCCTGCGGGTGCGC AGCTGG GCCGAGCCGCAGGCC TTTCTGGCGGCGATC Lcho_4282 4792528 - 4793181 + | two component LuxR family transcriptional regulator Lcho_4283 4793282 - 4793623 + | alkylphosphonate utilization operon protein PhnA Lcho_4284 4793681 - 4794406 + | DTW domain-containing protein TERM 2472 4794553 - 4794609 + T 73 -9.5 -3.86897 | opp_overlap 4794555, overlap 4794605 CACGGAGTTGTCCAA CACGGCATCGGTGTGCGGGCACA GAACGGAGCGA TGTGCATGAACATCGATGCAGTG TTTGTGAAACATGAG TERM 2473 4795474 - 4795449 - T 80 -12.5 -3.71649 | CCCGGAAATGCGAAA CGCCCATGACC GGTG GGCCTTGGGCG TTCAGGATGGGTGGT Lcho_4285 4795618 - 4795520 - | hypothetical protein TERM 2474 4796710 - 4796700 - g 87 -6.8 -5.02074 | TCATTGGTCAAAAAA TGGG AAT CCCA GGCGCAAGGTTTATC Lcho_4286 4795843 - 4797186 + | DNA methylase N-4/N-6 domain-containing protein Lcho_4287 4798082 - 4797183 - | hypothetical protein Lcho_4288 4801316 - 4798140 - | type III restriction protein res subunit TERM 2475 4798312 - 4798298 - G 71 -7.1 -4.25104 | opp_overlap 4798297 GCGGCCGCACGAAAA GCTGG AATTG CCAGC CATTGCTCTCACTCT TERM 2476 4799471 - 4799487 + g 71 -15.1 -3.08996 | opp_overlap 4799450 CGCTGAGTAGGCGTT GCGGCGC GCG GCGCCGC TCTTCAATCGCCGTC TERM 2477 4801550 - 4801525 - H 78 -3.9 -4.72272 | overlap 4801527 4801529 CGCTGCGATCAAAAA GTGATGGAGCA ATCG TGCTCGACCGC GCCGCGCCACTGATC Lcho_4289 4801539 - 4801886 + | hypothetical protein Lcho_4290 4802062 - 4802706 + | hypothetical protein Lcho_4291 4802808 - 4803218 + | hypothetical protein Lcho_4292 4804227 - 4803649 - | hypothetical protein Lcho_4293 4804823 - 4804227 - | hypothetical protein Lcho_4294 4805944 - 4804820 - | XRE family transcriptional regulator Lcho_4295 4806060 - 4806371 + | hypothetical protein Lcho_4296 4807298 - 4806411 - | LysR family transcriptional regulator TERM 2478 4807044 - 4807012 - G 87 -6.1 -5.00616 | opp_overlap 4807038, overlap 4807013 TGCGCTGCGAAAAAA GGGCCGAACCCGAGT GCC ACCTGGGTCTGGCCG CCGCGCGCCAGTTCT Lcho_4297 4807434 - 4808399 + | hypothetical protein Lcho_4298 4809255 - 4808416 - | IclR family transcriptional regulator Lcho_4299 4809470 - 4810435 + | beta-lactamase domain-containing protein Lcho_4300 4810441 - 4812177 + | monooxygenase FAD-binding Lcho_4301 4812197 - 4812415 + | hypothetical protein Lcho_4302 4812429 - 4813760 + | homogentisate 1,2-dioxygenase TERM 2479 4815065 - 4815112 + G 79 -13.5 -3.61398 | gap 3 GGCGCCTGCGAGGGC CGG-GTGCTGCCGG-CGCATCAGC GGG GCTGA-GCGTCCGTCCGCACGCCG TTCTTGACGGCCACC Lcho_4303 4813757 - 4815094 + | fumarylacetoacetase Lcho_4304 4816059 - 4815082 - | hypothetical protein Lcho_4305 4818302 - 4816065 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Lcho_4306 4818787 - 4818314 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Lcho_4307 4819008 - 4819916 + | AraC family transcriptional regulator TERM 2480 4819983 - 4819966 - T 100 -14.1 -5.58454 | CGCAGACGAAAAAAA GCCCGGC AGTT GCCGGGC TTCAAGGGTTGCCGA Lcho_4308 4820600 - 4820037 - | phasin family protein Lcho_4309 4820933 - 4821865 + | pseudouridine synthase Lcho_4310 4822885 - 4821875 - | oxidoreductase domain-containing protein Lcho_4311 4823011 - 4824237 + | putative metal dependent phosphohydrolase Lcho_4312 4824753 - 4824238 - | putative transmembrane protein Lcho_4313 4824975 - 4825997 + | peptidase domain-containing protein Lcho_4314 4826937 - 4826020 - | hypothetical protein Lcho_4315 4828187 - 4826967 - | glucose sorbosone dehydrogenase Lcho_4316 4828399 - 4829163 + | inositol-phosphate phosphatase TERM 2481 4829237 - 4829257 + G 73 -9.6 -3.96148 | overlap 4829238 CCGCCGCCACGCTGC TCGGCGCC CTGCT GGCGCCGC TTTCTGCTGCCGCAC TERM 2482 4829638 - 4829626 - g 71 -6.2 -4.18934 | overlap 4829627 GACGAGCTGAAGAAA CGGG GTCTG CCCG AACCCAAGTGCTGGG TERM 2483 4829840 - 4829819 - g 70 -13.7 -3.21668 | gap 1, overlap 4829817 ACCAGTACACCAAGA GCG-GCGCCG CAC CGGCGCGCGC TGCGGCCACCGGCGA Lcho_4317 4829200 - 4830231 + | extracellular solute-binding protein TERM 2484 4830319 - 4830375 + G 73 -14.3 -3.28842 | overlap 4830320 4830320 4830322 CGCGGCGCGGGCGTT TCGGCGGCGACGTGACGGTGGCGACGA TCG TGGTCGTCATCGCCACGCTGCTGCTGC TGTTCATCTTCTATC TERM 2485 4830320 - 4830374 + G 78 -17.8 -2.56582 | overlap 4830319 4830320 4830322 GCGGCGCGGGCGTTT CGGCGGCGACGTGACGGTGGCGACGA TCG TGGTCGTCATCGCCACGCTGCTGCTG CTGTTCATCTTCTAT TERM 2486 4830322 - 4830372 + G 76 -16.8 -2.81181 | overlap 4830320 4830319 4830320 GGCGCGGGCGTTTCG GCGGCGACGTGACGGTGGCGACGA TCG TGGTCGTCATCGCCACGCTGCTGC TGCTGTTCATCTTCT Lcho_4318 4830228 - 4832075 + | binding-protein-dependent transport systems inner membrane component Lcho_4319 4832077 - 4833171 + | ABC transporter-related protein TERM 2487 4834169 - 4834184 + G 70 -4 -4.38712 | gap 1, overlap 4834133 4834173 GCGACCTGGCCACCA TC-AGCG GGC CGCTCGA TTTTCTCGGCATCAA Lcho_4320 4833283 - 4834665 + | beta-galactosidase Lcho_4321 4834755 - 4835984 + | extracellular solute-binding protein TERM 2488 4836000 - 4836020 + F 81 -13.9 -3.53012 | overlap 4836001 GGCTGGACAGGCGGC AGGCCCGGC CAC GCCGGGCCA TTTCCAACCGAAGGG TERM 2489 4836001 - 4836019 + F 84 -17.4 -2.71712 | overlap 4836000 GCTGGACAGGCGGCA GGCCCGGC CAC GCCGGGCC ATTTCCAACCGAAGG Lcho_4322 4836046 - 4836960 + | binding-protein-dependent transport systems inner membrane component Lcho_4323 4836957 - 4837895 + | binding-protein-dependent transport systems inner membrane component Lcho_4324 4837927 - 4839012 + | ABC transporter-related protein TERM 2490 4839643 - 4839657 + G 72 -12.8 -3.53224 | opp_overlap 4839627 4839642 4839639 GCGCCCGACAACGAG GCCCGC ATG GCGGGC TTTCGCGACGAGCTG Lcho_4325 4839058 - 4840113 + | LacI family transcription regulator TERM 2491 4840101 - 4840159 + F 73 -12.4 -3.30124 | gap 3, opp_overlap 4840081, overlap 4840101 4840103 4840115 CGACCTGGACATTCC G-ATCGCCGCCTGAG-CGCGCCGCGGGCC GGCC GGCCCTGGGCGCGTCTC-GTCGGTGGTCC TTGTCGACCCTCGAA TERM 2492 4840101 - 4840158 + F 86 -18.4 -2.57931 | opp_overlap 4840081, overlap 4840101 4840103 4840115 CGACCTGGACATTCC GATCGCCGCCTGAG-CGCGCCGCGGGCC GGCC GGCCCTGGGCGCGTCTC-GTCGGTGGTC CTTGTCGACCCTCGA TERM 2493 4840103 - 4840156 + F 77 -15.2 -2.8294 | opp_overlap 4840081, overlap 4840101 4840101 4840115 ACCTGGACATTCCGA TCGCCGCCTGAG-CGCGCCGCGGGCC GGCC GGCCCTGGGCGCGTCTC-GTCGGTGG TCCTTGTCGACCCTC TERM 2494 4840115 - 4840144 + F 84 -16.3 -2.81464 | overlap 4840103 4840101 4840101 CGATCGCCGCCTGAG CGCGCCGCGGGCC GGCC GGCCCTGGGCGCG TCTCGTCGGTGGTCC TERM 2495 4840432 - 4840452 + G 70 -2.4 -4.56597 | opp_overlap 4840431, overlap 4840404 4840403 4840438 GACGTCGGCATGAAG GCGCTCGC GGCGG GCAAGCAC TTTTTCACCGAGAAG TERM 2496 4840585 - 4840527 - g 75 -12.5 -3.68222 | gap 3, overlap 4840528 GGCCAAGCGCAAGAA GCTGCGCATCGGCTGCGCGCCCGACACC TTTCTC GGTGCCGG-CGCGCAGGCCACGCGC-G- CGCTGATCGACGCCG TERM 2497 4840585 - 4840528 - g 79 -18.5 -2.80612 | gap 2, overlap 4840527 GCCAAGCGCAAGAAG CTGCGCATCGGCTGCGCGCCCGACACC TTTCTC GGTGCCGG-CGCGCAGGCCACGCGC-G CGCTGATCGACGCCG Lcho_4326 4840192 - 4841265 + | oxidoreductase domain-containing protein Lcho_4327 4841281 - 4842030 + | xylose isomerase domain-containing protein TERM 2498 4843001 - 4842982 - g 72 -11.4 -3.64259 | gap 1, opp_overlap 4842981, overlap 4842969 AAGCACCCCGAACAA GGCGCAGCC GAA GGC-GCGCC GTTCATCGCCGATCA Lcho_4328 4842049 - 4843107 + | xylose isomerase domain-containing protein Lcho_4329 4843130 - 4844293 + | oxidoreductase domain-containing protein TERM 2499 4845292 - 4845306 + G 75 -12.8 -3.64487 | opp_overlap 4845273 GCCGGCGCGTTGCCC GGCGCC GCA GGCGCC TTGTTGCCACTCTCG Lcho_4330 4844317 - 4846827 + | glycoside hydrolase family 3 protein Lcho_4331 4848458 - 4846854 - | methyl-accepting chemotaxis sensory transducer TERM 2500 4848366 - 4848354 - G 71 -6.9 -4.18018 | GGTGGCGACCGAAAA GGCCA GAA CGGCC AGCAGAGAGACGGCG Lcho_4332 4848568 - 4849770 + | major facilitator transporter Lcho_4333 4849893 - 4851338 + | RES domain-containing protein Lcho_4334 4851825 - 4851406 - | PilT domain-containing protein Lcho_4335 4852076 - 4851822 - | plasmid stability protein StbC TERM 2501 4852104 - 4852116 + H 75 -4.1 -4.67353 | overlap 4852093 4852093 GTCGTGCATTTGGTG CATGC ATT GTATG TTTTTGACTGCATCG Lcho_4336 4852240 - 4852899 + | lysine exporter protein LysE/YggA Lcho_4337 4852915 - 4853565 + | FMN-binding negative transcriptional regulator Lcho_4338 4854950 - 4853580 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 2502 4854530 - 4854566 + g 72 -3.7 -4.56597 | gap 3 GCCAGGTGTCCATCT CGTCGCGCAG-CGCCTGC ACCT GCAG-CGTCAG-GCGGCG TTTTTCGGCGGCGCG Lcho_4339 4856756 - 4854954 - | histidine kinase Lcho_4340 4858167 - 4856824 - | sodium:dicarboxylate symporter TERM 2503 4858851 - 4858864 + G 82 -4.5 -4.8083 | overlap 4858833 4858852 GGGTGCTGCTGCTGT TGCAC GCGG GTGCG TTTTTCCTGCTGTTC TERM 2504 4859326 - 4859344 + G 75 -13.8 -3.55444 | GCTGGCGGCGCTGGT CGGCGCCG GTG CGGCGCTG TTTGCCGGCTGCCAG Lcho_4341 4858580 - 4859770 + | major facilitator transporter Lcho_4342 4860607 - 4859783 - | hypothetical protein TERM 2505 4860960 - 4861017 + G 82 -12.8 -4.07568 | gap 3 CGAGGCCTTGCGGCA GCTCGCGGCCGAGG-GCC-TGGTGACG ATCGAGC CG-CGCCGCGGCGCCTCGGTCACGAGC TTTTCCGACGACCAG Lcho_4343 4860772 - 4861428 + | GntR family transcriptional regulator Lcho_4344 4862352 - 4861441 - | ornithine cyclodeaminase/mu-crystallin Lcho_4345 4863128 - 4862400 - | GntR family transcriptional regulator Lcho_4346 4863880 - 4863125 - | hypothetical protein Lcho_4347 4864235 - 4863900 - | ferredoxin TERM 2506 4864188 - 4864227 + g 74 -7.6 -4.22652 | overlap 4864189 GCTGACCTTGGGGCG GGGCGCCTCGGCGGTCGC GGCC GTGGCCGTCGGGGCGGGG TTTTCCATGGTGTCG Lcho_4348 4864543 - 4864247 - | hypothetical protein TERM 2507 4864472 - 4864519 + g 70 -9.6 -3.78953 | CAGGTAGTCGTAGGC CTCGACCTGTGCCATGCCGGGC GCCA GCTCGGTGCGGAACTGGCCGGG TTTGCTCGTCAGGAT Lcho_4349 4864925 - 4864590 - | ferredoxin Lcho_4350 4865298 - 4866029 + | TENA/THI-4 domain-containing protein TERM 2508 4866048 - 4866068 + F 79 -2.5 -4.98255 | gap 1, overlap 4866049 CGTGCGCCCGCACCT G-CGGGCG CCGATC CGTCCGTC TTTTTGTCATTCCAG TERM 2509 4866444 - 4866456 + G 71 -9.1 -4.05033 | opp_overlap 4866406 4866430 4866427 4866425, overlap 4866430 AGTTCCTGCGCTCGG CGCAG ACG CTGCG TTTCTATGCGGTCGA Lcho_4351 4866095 - 4867570 + | aldehyde dehydrogenase Lcho_4352 4867598 - 4868077 + | hypothetical protein Lcho_4353 4868103 - 4869098 + | oxidoreductase FAD/NAD(P)-binding subunit TERM 2510 4869096 - 4869139 + F 75 -12.6 -3.53444 | gap 3, overlap 4869101 4869126 TTCAACTTCCAGCCC TGAGCGCTGAACCGCCGACCC GGCAA GGGTCGGCGGT---GCGCTCG TTTCCGACCCGATCC TERM 2511 4869101 - 4869136 + F 84 -16.9 -2.90496 | gap 1, overlap 4869096 4869126 CTTCCAGCCCTGAGC GCTGAACCGCCGACCC GGCAA GGGTCGGCGGTGC-GC TCGTTTCCGACCCGA TERM 2512 4869159 - 4869172 + F 75 -3.7 -4.67234 | overlap 4869158 4869126 4869161 CGACCCGATCCGAGT CCGGC CACC GCAGG TTTTTCACCTTCGGT TERM 2513 4869161 - 4869191 + F 100 -16.9 -4.71061 | overlap 4869158 4869126 4869159 ACCCGATCCGAGTCC GGCCACCGCAGGT TTTTC ACCTTCGGTGGCC TTTTTGCATCTGCGT Lcho_4354 4869533 - 4871062 + | hypothetical protein Lcho_4355 4871068 - 4872552 + | gamma-glutamyltransferase Lcho_4356 4872594 - 4873211 + | glutathione S-transferase domain-containing protein Lcho_4357 4874208 - 4873225 - | 2OG-Fe(II) oxygenase Lcho_4358 4874421 - 4877429 + | hypothetical protein TERM 2514 4878582 - 4878606 + G 73 -11.3 -3.72695 | CCGCCTCCGACGAGG CCCAGCGCATC GCC GACGCGCAGGG TTTCATCGGCCAGCT Lcho_4359 4877426 - 4879102 + | OmpA/MotB domain-containing protein Lcho_4360 4879175 - 4880344 + | DGPFAETKE family protein Lcho_4361 4880434 - 4880847 + | DGPFAETKE family protein Lcho_4362 4880884 - 4881306 + | glyoxalase/bleomycin resistance protein/dioxygenase Lcho_4363 4881296 - 4882582 + | RNA polymerase ECF-subfamily sigma factor Lcho_4364 4882921 - 4882583 - | hypothetical protein Lcho_4365 4883128 - 4884381 + | DEAD/DEAH box helicase domain-containing protein Lcho_4366 4884416 - 4885141 + | putative esterase TERM 2515 4885396 - 4885356 - g 82 -9.6 -4.3534 | gap 1, opp_overlap 4885358, overlap 4885337 4885350 4885357 GCTGAACGACGAAAA GCGCGCCGGCCGCTACC TCTGCGCC GGCTGCGGCCTG-GCGC TGTTCGACGCCCGCG Lcho_4367 4885138 - 4885632 + | methionine-R-sulfoxide reductase Lcho_4368 4886400 - 4885633 - | putative transcriptional regulator TERM 2516 4886113 - 4886125 + g 77 -4.7 -4.63218 | GCGCTGCAGTTCGTC CACGG CCT CCGGG TTTTCTTCGACGCCG Lcho_4369 4887158 - 4886403 - | short-chain dehydrogenase/reductase SDR TERM 2517 4887478 - 4887502 + G 70 -9.9 -3.85698 | overlap 4887499 CTACGCCCGTTACGC CGCCACCATCG CGC CGACGCTGGCG TTTCTGCAGGGCCGC Lcho_4370 4887215 - 4889119 + | radical SAM domain-containing protein Lcho_4371 4890915 - 4889146 - | histidine kinase Lcho_4372 4891037 - 4890909 - | hypothetical protein TERM 2518 4891802 - 4891822 + G 71 -8.9 -4.09511 | CGCCCTGATCGTGGG CGCGTTCGC CGA GCGCATGCG TTTTGCCGCCCTGTT Lcho_4373 4891326 - 4892645 + | ammonium transporter Lcho_4374 4892676 - 4892957 + | hypothetical protein Lcho_4375 4892957 - 4893532 + | MOSC domain-containing protein Lcho_4376 4893573 - 4895552 + | superfamily I DNA/RNA helicase Lcho_4377 4896250 - 4895549 - | phospholipase/carboxylesterase Lcho_4378 4896304 - 4896996 + | carboxymethylenebutenolidase Lcho_4379 4898086 - 4897025 - | catalase TERM 2519 4897829 - 4897772 - G 90 -13.3 -4.18018 | gap 1, overlap 4897773 GCCGCCGACCGAAAA GCGCGCGATCACCGGCACCT-TGTCGCC GTT GAAGACCGAGGCGCTGGTGAGCGCGCGG GCGTCTGCATGGCCG TERM 2520 4897828 - 4897773 - G 79 -16.8 -3.10597 | gap 1, overlap 4897772 CCGCCGACCGAAAAG CGCGCGATCACCGGCACCT-TGTCGCC GTT GAAGACCGAGGCGCTGGTGAGCGCGCG GGCGTCTGCATGGCC Lcho_4380 4899362 - 4898598 - | rare lipoprotein A Lcho_4381 4899782 - 4901035 + | 2-nitropropane dioxygenase NPD TERM 2521 4901152 - 4901176 + F 81 -5 -4.95155 | gap 1 TGCATCCGGCTCGAT TACC-CGCTCG ATAT CGAACGCGGTA TTTTTATACTCTCCG TERM 2522 4901591 - 4901581 - g 76 -8.2 -4.3129 | GACCGACGAGGAAAA GGCG ATC CGCC TGCGCTACAACAAGT Lcho_4382 4901216 - 4903453 + | isocitrate dehydrogenase, NADP-dependent Lcho_4383 4903654 - 4904367 + | methyltransferase type 11 Lcho_4384 4905898 - 4904459 - | tRNA modification GTPase TrmE TERM 2523 4904729 - 4904674 - G 79 -16.9 -3.13403 | gap 3, overlap 4904672 CGCGGGCGATGAACA CGCCCTCCGGCGCGGCG-TGCCAGC-CG GCC CGCGCCAGCAGCGCGGCGC-GCAGGGCG TCGATGCCGTCGTGC TERM 2524 4904797 - 4904840 + g 73 -9.4 -3.8969 | gap 1, overlap 4904789 CTTGCCGGGCTGCCA GGCGGGCGGC-CACCCGGGCA GCC TGTTCGGGGGCGGCGTCGGCC TTGTTGTGTACATGG TERM 2525 4905972 - 4905943 - R 100 -22.9 -3.37796 | overlap 4905924 CGCCAGGAGGGACAA CGCCGCTGCGACC ATCG GGCCGCAGCGGCG TTGCGAGGGTCTGCG TERM 2526 4906124 - 4906079 - R 88 -17.6 -3.05384 | CGCCTCCTGAGCCAA GGGCGTCGCTCCAGGCAGTT GATTGA ATCTGCCTGCAGCGACGACC TCGGGTCTGCCCCGC TERM 2527 4906285 - 4906260 - R 100 -20.5 -3.92542 | TGCATCTCGAAACAA GACAGGCGGCC CGCG GGCCGCCTGTC GACATCAGCGCGAGC Lcho_4385 4907993 - 4906314 - | 60 kDa inner membrane insertion protein TERM 2528 4907716 - 4907747 + g 86 -9.4 -4.56597 | CCTCGGCTGTCGAAC GTGGCCTTGACCAC GTCG GTGGTCAGGACGAC TTTTTCAGCCGCCGA TERM 2529 4907974 - 4907960 - G 72 -3.4 -4.51196 | overlap 4907951 GCGAAATGGAGAAAA CGCCCC AGA GCAGCG CGCGCCGCAGGTCGG Lcho_4386 4908334 - 4907996 - | hypothetical protein Lcho_4387 4908924 - 4908454 - | hypothetical protein Lcho_4388 4909123 - 4908989 - | ribosomal protein L34