TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.603996 %AT, 1633455 nt, 11559 terms. Intergenic: 0.656569 %AT, H2T: 233770 nt, 1678 terms; T2T: 28603 nt, 760 terms; H2H: 39672 nt, 596 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|170016236|ref|NC_010466.1| Leuconostoc citreum KM20 plasmid pLCK2, complete sequence (length 31463) LCK_p200001 440 - 156 - | hypothetical protein TERM 1 847 - 822 - H 76 -2.5 -5.48623 | opp_overlap 822 824 846, overlap 812 AAAGACAAACAAAAA GAGCTGGTG TTCCTACG CACTAGCCC TTTTTACTAGAGAGG TERM 2 1095 - 1059 - g 73 -8.2 -3.90291 | overlap 1082 ACGTTCGCAATTAAA CGTTATTTTGATGATC TTAAT GATCGTTAAAATAACG TGGGCACCCTAAGGG LCK_p200002 984 - 1088 + | hypothetical protein TERM 3 1098 - 1114 + T 100 -10.1 -5.48623 | CGTTAAAATAACGTG GGCACCC TAA GGGTGTC TTTTTGTTTGTCTTT mrr 2208 - 1219 - | Mrr restriction system protein TERM 4 1448 - 1464 + g 100 -12.3 -4.43501 | AAATTACTGATATCT GGTCCTG TAA CAGGACC TTTTGTAAATCGCTT TERM 5 1733 - 1749 + g 78 -3.7 -5.25976 | ATATTGACATTTGAA GATGATA GTA TTTCATC TTTCTTTTTTTGATT TERM 6 2448 - 2416 - H 82 -8.6 -4.08394 | gap 1, opp_overlap 2415 2405 2418, overlap 2445 ATAGGCGCTGTAAAA TAGCAGTTTCCCC AGTAGGAA GGGGAAAC-GCTA CTGTCATCGCTTGTC LCK_p200004 2583 - 2822 + | putative mobilization protein TERM 7 3378 - 3366 - g 71 -4.8 -4.57837 | AGATCGCTTTAAAAA CGTG TTAGC CACG ATGAAGAAAGCCACC LCK_p200005 2806 - 3819 + | putative mobilization protein TERM 8 3966 - 4013 + F 86 -5.8 -5.42605 | gap 1, opp_overlap 3966 TAAAATAATGCCAAA CAAAAAGAACACT-CTGGACAAA CAT TATGTACAACGGTGTTCTTTTTG TTTTGTTTTTATTAA LCK_p200006 4351 - 4452 + | transposase LCK_p200007 4625 - 4759 + | transposase TERM 9 4798 - 4828 + F 75 -9 -3.41978 | overlap 4792 TTTGTTGACTCCCGA GCCAGCCACACTTT GGC AGATTTTGGCTGGC TTAGTATTAGTCTTG TERM 10 4881 - 4852 - f 70 -8.1 -3.28791 | opp_overlap 4857, overlap 4857 AGTCTTGTTGCAGAA GTAAATTGATGAT CACC ATCATTAATTTAC AAACCCCCTCGTCTG TERM 11 4887 - 4908 + F 100 -10.1 -4.80853 | opp_overlap 4886 4885 ATTAATTTACAAACC CCCTCGTCT GGCA GGACGGGGG TTATTTTTTTCAAAT TERM 12 4953 - 4930 - f 77 -5.3 -4.98531 | TTTTCAAATTAAAAA GCTCATCAC TGGCAG GTGACAAGC TCTGGATTGAAGGTA TERM 13 5417 - 5404 - f 91 -5.2 -5.87996 | overlap 5392 GAACCAATAAAAAAA CGCC CTTATT GGCG CCGTATCACTATACT TERM 14 5794 - 5821 + F 88 -7.8 -4.99043 | AAAAAGATGTATGTA GCTATCAAGAAT TGGC GTTCTTGGTGGC TTTTCTTTATGCAAA repB1 6164 - 6997 + | replication-associated protein RepB repC 7000 - 7377 + | replication-associated protein RepC LCK_p200010 7634 - 7852 + | transposase TERM 15 8022 - 7987 - T 81 -10 -3.35586 | opp_overlap 7990 7995, overlap 7995 GCAAATTAAATTGAA TAGAAAAAGACATAAC GCAA GTTATGTCTTTTCTTA CTTAGATATATTTTC TERM 16 7990 - 8019 + T 79 -9.5 -3.40258 | opp_overlap 7987 7995, overlap 7995 AATTAAATTGAATAG AAAAAGACATAAC GCAA GTTATGTCTTTTC TTACTTAGATATATT TERM 17 7995 - 8014 + T 100 -9.4 -4.79174 | opp_overlap 7995 7987, overlap 7990 AATTGAATAGAAAAA GACATAAC GCAA GTTATGTC TTTTCTTACTTAGAT TERM 18 8014 - 7995 - T 100 -9.4 -5.1167 | opp_overlap 7990 7995, overlap 7987 AATTGAATAGAAAAA GACATAAC GCAA GTTATGTC TTTTCTTACTTAGAT LCK_p200011 9039 - 8020 - | exopolysaccharide biosynthesis protein LCK_p200012 10435 - 9062 - | major facilitator superfamily permease ymgK2 11331 - 10489 - | aldo/keto reductase TERM 19 11203 - 11213 + g 71 -6.8 -4.07562 | opp_overlap 11203 AGACGTATCAAGCAA TCGG TAA CCGA TTTGTATAGCATTTA TERM 20 11402 - 11374 - R 72 -2.6 -5.25803 | gap 1, opp_overlap 11381 AAGGTTTATAAAAAA GCCTA-ACTTGTT AACT AACAAATTTAAGC TTTAGTAGCAATACT LCK_p200014 11571 - 11428 - | hypothetical protein TERM 21 11593 - 11633 + r 75 -4.8 -4.92314 | overlap 11597 TTTCTCCTACACCTA CTTTCTGTGTAAAACAGT TAATT ATAGTTTTACGCAGTGAG TTTTTATAAATTACT LCK_p200015 11892 - 11644 - | hypothetical protein LCK_p200016 12420 - 12007 - | hypothetical protein TERM 22 12722 - 12700 - R 87 -10.6 -3.8917 | TTCTAATTATAAGAA GCACAACGTT TAG ACCGTTGTGC TGAGACTTGCTACTG LCK_p200017 13287 - 12760 - | Gls24 family general stress protein LCK_p200018 13515 - 13315 - | small integral membrane protein LCK_p200019 14087 - 13533 - | hypothetical protein LCK_p200020 14399 - 14112 - | hypothetical protein LCK_p200021 15274 - 14918 - | dehydrogenase LCK_p200022 15873 - 15316 - | transposase TERM 23 16501 - 16486 - gH 72 -4.7 -4.7629 | TTATCAATGGAAAAA TTGGC ATCCCA GCCAA CAAGAGATGCGTCGC LCK_p200023 16415 - 16999 + | ORFC of IS3-like IS LCK_p200024 16942 - 17196 + | ORFC of IS3-like IS TERM 24 17285 - 17297 + F 78 -7.7 -4.20367 | opp_overlap 17284, overlap 17268 GAATTTCAAAAATTC GCCTT GTG AAGGC TTATTTGTTGCACGA LCK_p200025 17470 - 17739 + | transcriptional regulator TERM 25 18296 - 18286 - f 73 -4 -5.03145 | opp_overlap 18286 TAATTGTTGAAAAAA TTGT CGC ACAA ATTATTTCTTAAATT TERM 26 18624 - 18610 - g 95 -11.4 -4.96646 | GCAGATAAGCAAAAA GGGCAG GGG CTGCCC AACTTGCCGCTGAGC LCK_p200026 18592 - 19944 + | major facilitator superfamily permease map2 20039 - 22297 + | trehalose or maltose hydrolase ( phosphorylases) TERM 27 22310 - 22327 + G 83 -9.9 -3.88498 | overlap 22325 TAATAAGCCTGATGA TGAGCGA GAAA TCGCTCA TTTGCTGTATAGCAG LCK_p200028 22306 - 23337 + | galactose mutarotase LCK_p200029 23340 - 24011 + | phosphatase/phosphohexomutase TERM 28 24018 - 24057 + F 83 -8.1 -4.32402 | opp_overlap 24023, overlap 24023 ATGCAATAGATAACT AAAAAGAGTGTCAGT ACATAAAAAC ACTGACACTCTTTTG TTGTTTTAATTAACA TERM 29 24052 - 24023 - f 100 -9.4 -4.9755 | opp_overlap 24018 24023 ATAGATAACTAAAAA GAGTGTCAGTAC ATAAAA ACACTGACACTC TTTTGTTGTTTTAAT TERM 30 24023 - 24052 + F 90 -8 -5.10656 | opp_overlap 24023, overlap 24018 ATAGATAACTAAAAA GAGTGTCAGT ACATAAAAAC ACTGACACTC TTTTGTTGTTTTAAT TERM 31 24425 - 24461 + F 100 -19.7 -5.8187 | opp_overlap 24425 24427, overlap 24427 AAAACCTTATTAAAA TAGCCCCCGTTATCTAA CAG TTAGATAATGGGGGCTG TTTTTTTGTTAAGTG TERM 32 24461 - 24425 - f 100 -15.3 -4.30034 | opp_overlap 24425 24427, overlap 24427 AAAACCTTATTAAAA TAGCCCCCGTTATCTAA CAG TTAGATAATGGGGGCTG TTTTTTTGTTAAGTG TERM 33 24459 - 24427 - f 100 -17.9 -3.74158 | opp_overlap 24425 24427, overlap 24425 AACCTTATTAAAATA GCCCCCGTTATCTAA CAG TTAGATAATGGGGGC TGTTTTTTTGTTAAG TERM 34 24427 - 24459 + F 100 -20.1 -4.54306 | opp_overlap 24427 24425, overlap 24425 AACCTTATTAAAATA GCCCCCGTTATCTAA CAG TTAGATAATGGGGGC TGTTTTTTTGTTAAG int1 24588 - 25178 + | tyrosine recombinase LCK_p200031 26042 - 25350 - | cAMP-binding protein - catabolite gene activator or regulatory subunit of cAMP-dependent protein kinase LCK_p200032 26610 - 26059 - | DNA-binding ferritin-like protein (oxidative damage protectant) LCK_p200033 26911 - 26612 - | copper chaperone cadA 28762 - 26912 - | cation transport ATPase TERM 35 29968 - 29994 + G 79 -5.9 -4.91511 | gap 1 GCGTTTTCTGGATGG TGCTAATCGCCG TGAA TGGCGGTT-GCA TTTTTCTGATGACCT TERM 36 30429 - 30397 - g 77 -10.6 -2.85437 | opp_overlap 30403, overlap 30394 TACCAATAGCAATGA TGCGCCTGGAATGG TTCAT CCATTCCATGTGCA TGGAACCCAATTCTT LCK_p200035 29243 - 30772 + | putative multicopper oxidase LCK_p200036 31429 - 30887 - | transposase SEQUENCE gi|170016273|ref|NC_010467.1| Leuconostoc citreum KM20 plasmid pLCK3, complete sequence (length 17971) LCK_p300001 282 - 1436 + | RepB protein TERM 1 1655 - 1629 - g 73 -6.6 -4.28432 | overlap 1648 AATGTCAACTGAAAA TCGTCAACGTGA AGA TAAAGTTGACGA CAACAAAAAAGAGCA LCK_p300002 1429 - 1950 + | RepB-like protein LCK_p300003 2147 - 3034 + | hypothetical protein TERM 2 3451 - 3421 - T 100 -15.5 -4.41177 | opp_overlap 3421 TATACAAAGTGAAAA GCGCTATCCCTAC AGCCA GTTGGGATAGCGC TTTTTTTGTTAACAT TERM 3 3421 - 3451 + T 100 -15.5 -5.80364 | opp_overlap 3421 TATACAAAGTGAAAA GCGCTATCCCTAC AGCCA GTTGGGATAGCGC TTTTTTTGTTAACAT TERM 4 3834 - 3820 - T 79 -10 -3.30903 | AAAATTGTGTCAGAA GTCGCT TTT AGCGAC AACTTAAAAACTAAC TERM 5 3894 - 3923 + T 100 -13.9 -3.57561 | opp_overlap 3900, overlap 3900 3922 TATATACACATGAGG CAAAAACATATCA ATCT TGATATGTTTTTG TTTGGGAAATTCCCA TERM 6 3917 - 3900 - T 83 -7.1 -4.69664 | opp_overlap 3894 3900 CACATGAGGCAAAAA CATATCA ATCT TGATATG TTTTTGTTTGGGAAA TERM 7 3900 - 3917 + T 89 -7.1 -5.27335 | opp_overlap 3900, overlap 3894 CACATGAGGCAAAAA CATATCA ATCT TGATATG TTTTTGTTTGGGAAA LCK_p300004 4489 - 4037 - | putative replication initiation protein TERM 8 4317 - 4335 + g 89 -11.8 -3.737 | overlap 4309 4312 GTTTGTTCAGTTGAA CTGTTCAG TTG CTGAACAG TTTGGTGGACACTTG TERM 9 4411 - 4425 + g 73 -8.6 -3.78156 | opp_overlap 4410 TATCACTCAAATTAG CCCTTT TAT AAAGGG TTGTTCGTGATATTT TERM 10 4678 - 4652 - H 76 -4.5 -5.08367 | gap 1 AATACAAATTAAAAA GCCCTCAACCTC GCCA AAGGTT-AGGAC TTGTTGACCTAGATA TERM 11 4854 - 4820 - H 74 -5.7 -4.82128 | gap 1, opp_overlap 4820, overlap 4815 TGACGAAATATAAAA GCGTATCCACAAGTCC GTTC AGACA-GAGGATACGC TTTTTACGTCTGTTA TERM 12 4820 - 4854 + H 72 -5 -4.74453 | gap 1, opp_overlap 4820 4815 TGACGAAATATAAAA GCGTATCCACAAGTC CGTTCA GACA-GAGGATACGC TTTTTACGTCTGTTA TERM 13 5508 - 5493 - g 71 -6.2 -4.17089 | GTCAAATTGGGAAAA TGGAAA AAAT TTTCCA GATATTCCCATGCTT LCK_p300005 5383 - 5979 + | XRE family DNA-binding protein TERM 14 6026 - 6073 + T 100 -12.3 -4.54727 | opp_overlap 6029 6033, overlap 6033 TAATCATGGTTATCA GAACAAAGAGCTTAACTCT AGTTATTAAA GGAGTCAAGCTCTTTGTTC TTTTGATTTAACAAC TERM 15 6070 - 6029 - T 81 -9.7 -3.41051 | opp_overlap 6026 6033, overlap 6033 TCATGGTTATCAGAA CAAAGAGCTTAACTC TAGTTATTAAAG GAGTCAAGCTCTTTG TTCTTTTGATTTAAC LCK_p300006 6760 - 6161 - | transcriptional regulator TERM 16 6325 - 6312 - G 74 -5.3 -4.80289 | ACAAAATACATAAAA GCAAT GATA ATTGC AATTAAGGCCCATTT TERM 17 6470 - 6417 - G 81 -12.1 -2.62043 | opp_overlap 6430, overlap 6430 CCCATAATTAACGCA GTCACTTTATATATTGGCAAAACAT GCAT ATAATTTGCCAATATATAAACTGCC AGAAATAAAACATTT LCK_p300007 7107 - 7688 + | transcriptional regulator TERM 18 7788 - 7752 - T 100 -18.1 -4.70613 | opp_overlap 7752 AAAACCTTAATAAAA CAGCCCCTAACGAATCG ATT CGGTTGGTTAGGGGCTG TTTTTTTCTTATAAT TERM 19 7752 - 7788 + T 100 -20.3 -5.89921 | opp_overlap 7752 AAAACCTTAATAAAA CAGCCCCTAACGAATCG ATT CGGTTGGTTAGGGGCTG TTTTTTTCTTATAAT TERM 20 8064 - 8039 - T 100 -10.5 -5.47431 | opp_overlap 8039 TGAATACAGAAAAAA GGAAGCCTTGC GCTA ACAAGACTTCC TATGTAGAGCCGTTT TERM 21 8109 - 8140 + T 90 -3.9 -5.89827 | gap 2, opp_overlap 8109 ACTATGATTATTAAA TAACCG-CT-AGCTT TGCA GAGCTAAGGCGGTTA TTTTTTTTGCTGATT LCK_p300008 8242 - 8138 - | hypothetical protein TERM 22 8242 - 8226 - G 80 -10.1 -3.63707 | AACATAAGCTGTAAA GCGTCCG ATA CGGACAC TTGGGCTACTCCCTT TERM 23 8449 - 8488 + H 100 -11.9 -5.95539 | opp_overlap 8452 8457 TAATAAAATGTGTTA TAATTAAACTATTCAAT TATTAT ATTGAATAGTTTAATTG TTTTTTTATTTAGAA TERM 24 8485 - 8452 - H 87 -11.4 -3.33009 | opp_overlap 8449, overlap 8457 TAAAATGTGTTATAA TTAAACTATTCAAT TATTAT ATTGAATAGTTTAA TTGTTTTTTTATTTA TERM 25 8480 - 8457 - H 73 -6.9 -3.9941 | opp_overlap 8449, overlap 8452 TGTGTTATAATTAAA CTATTCAAT TATTAT ATTGAATAG TTTAATTGTTTTTTT trx2 8486 - 8827 + | thioredoxin LCK_p300010 8852 - 9178 + | thioredoxin-related protein TERM 26 9392 - 9379 - g 74 -3.9 -5.05782 | ATTTAGGTGAAAAAA TGTAT CAGA ATACA GTTAACGCAGGAGTT trxB3 9186 - 10115 + | thioredoxin-disulfide reductase frnE 10125 - 10784 + | protein-disulfide isomerase gshR5 10961 - 12298 + | glutathione reductase LCK_p300014 12445 - 13101 + | thiosulfate sulfurtransferase trxA 13141 - 13461 + | thioredoxin TERM 27 13487 - 13514 + F 91 -4.8 -5.80248 | opp_overlap 13487 13488, overlap 13488 ATATACTAATTAAAA TGCGTCATAACT CAAC AGTTGTGTCGCC TTTTTTTGTGTCTTA TERM 28 13488 - 13513 + F 79 -8.3 -4.05708 | opp_overlap 13487 13488, overlap 13487 TATACTAATTAAAAT GCGTCATAACT CAAC AGTTGTGTCGC CTTTTTTTGTGTCTT TERM 29 13742 - 13731 - f 70 -4.4 -4.72188 | opp_overlap 13731, overlap 13727 GTAATTTAAAAGAAA TCCA CTTA TGGA TTACTCAGCAATTGA TERM 30 14054 - 14042 - g 83 -6.3 -5.07567 | opp_overlap 14041 TGAGAGCTTAAAAAA TTCAG GCG CTGAA ATAATCTATAAAGAA LCK_p300016 13935 - 14525 + | DNA invertase-like protein TERM 31 14572 - 14547 - T 80 -6.9 -4.62054 | gap 1, opp_overlap 14547, overlap 14542 TTAACCAAAGTAAAA GGACCG-CTC TGGGAGG GAGACGGTCC TTTTTGAGAGAGAAT TERM 32 14547 - 14572 + T 82 -7.6 -4.56775 | gap 1, opp_overlap 14547 14542 TTAACCAAAGTAAAA GGACCG-CTCT GGGAG GGAGACGGTCC TTTTTGAGAGAGAAT LCK_p300017 15531 - 14686 - | transposase TERM 33 15462 - 15441 - G 71 -9.5 -2.81208 | gap 1, overlap 15438 15440 GTGCATTTAAAATAC GCACAAGCGC GTA GC-CTTGTGC TAAAAATTGATTAAC LCK_p300018 15780 - 15538 - | transposase LCK_p300019 16169 - 15912 - | hypothetical protein TERM 34 16296 - 16319 + H 70 -4.5 -4.83169 | gap 1, overlap 16298 AATGATAAAGTGCCC CGTCACGGCG TGACC CGCCG-GAGG TTTTTCTAGCCGGAT LCK_p300020 16513 - 17748 + | putative mobilization protein SEQUENCE gi|170016294|ref|NC_010469.1| Leuconostoc citreum KM20 plasmid pLCK4, complete sequence (length 12183) int2 86 - 673 + | tyrosine recombinase repA 679 - 1362 + | putative plasmid replication initiation protein TERM 1 1482 - 1507 + T 93 -6.9 -5.59564 | gap 1, opp_overlap 1482 ACCAGTCTAAAAAAA CGTCCTCAACAT CAA AAGT-GAGGACG TTTTTTTAGATTTCT TERM 2 1507 - 1482 - T 93 -6.9 -5.44721 | gap 1, opp_overlap 1482 ACCAGTCTAAAAAAA CGTCCTCAACAT CAA AAGT-GAGGACG TTTTTTTAGATTTCT LCK_p400003 2010 - 1513 - | GCN5-related N-acetyltransferase TERM 3 2236 - 2288 + H 81 -11 -2.73364 | opp_overlap 2245 2248, overlap 2245 GAGAAATTATATTAG CATTCAAAATAAGTTGAGATAG ATACAGACA CTATCTCAACTTATTTTTTATG TGGTTAAGCTGACAC TERM 4 2279 - 2245 - H 100 -10.3 -4.21908 | opp_overlap 2236 2245, overlap 2248 TATTAGCATTCAAAA TAAGTTGAGATAG ATACAGACA CTATCTCAACTTA TTTTTTATGTGGTTA TERM 5 2245 - 2279 + H 100 -10.3 -5.42131 | opp_overlap 2245 2248, overlap 2236 TATTAGCATTCAAAA TAAGTTGAGATAG ATACAGACA CTATCTCAACTTA TTTTTTATGTGGTTA TERM 6 2276 - 2248 - H 78 -7.6 -4.22883 | opp_overlap 2245 2236, overlap 2245 TAGCATTCAAAATAA GTTGAGATAG ATACAGACA CTATCTCAAC TTATTTTTTATGTGG TERM 7 2465 - 2433 - H 82 -8.6 -4.08394 | gap 1, opp_overlap 2432 2422 2436 ATAGGCGCTGTAAAA TAGCCGTTTCCCC AGTAGGAA GGGGAAACG-CTA CTGTCATCGCTTGTC LCK_p400004 2595 - 3830 + | putative mobilization protein TERM 8 3977 - 4024 + F 74 -2.2 -5.42605 | gap 1 TAAAATAATGCCAAG CAAAAAGAATACT-CTGGACAAA CTT TATGTACAACGGTGTTCTTTTTG TTTTGTTTTTATTGA TERM 9 4528 - 4542 + G 76 -2.1 -5.44119 | AGTGTATTTATCAAA GCAAG AAATG TTTGC TTTTTTTAAAGTCAA LCK_p400005 4331 - 5485 + | RepB protein LCK_p400006 5478 - 6044 + | RepB-like protein LCK_p400007 6158 - 6433 + | ORFA of IS3-like IS LCK_p400008 6586 - 7041 + | TcrY LCK_p400009 7054 - 7206 + | hypothetical protein copB2 7345 - 9498 + | Cu2+-Cu+-Ag+-P-type ATPase TERM 10 9483 - 9529 + T 100 -19.3 -2.84015 | gap 1, opp_overlap 9496, overlap 9496 9522 CGCGATGGGATTGAG GTATGATAAAAAATAGAAGAGC ACAT GCTCTTCTATTTTTT-TCATAC TAATTATGAAACTTT TERM 11 9517 - 9496 - T 100 -11.7 -5.31877 | opp_overlap 9483 9496 AGGTATGATAAAAAA TAGAAGAGC ACAT GCTCTTCTA TTTTTTTCATACTAA TERM 12 9496 - 9517 + T 100 -11.7 -5.55664 | opp_overlap 9496, overlap 9483 AGGTATGATAAAAAA TAGAAGAGC ACAT GCTCTTCTA TTTTTTTCATACTAA LCK_p400011 10137 - 9580 - | ATPase involved in DNA repair TERM 13 10383 - 10419 + H 85 -4.4 -5.626 | AAAAGACTATTAAAA CAGCCCTCATTATCTG ACTAG TAGATACCGGGGGTTG TTTTTTTATAAAATG LCK_p400012 10689 - 11339 + | ABC transporter ATP-binding protein LCK_p400013 11336 - 12091 + | ABC-type uncharacterized transport system, permease component SEQUENCE gi|170016308|ref|NC_010470.1| Leuconostoc citreum KM20 plasmid pLCK1, complete sequence (length 38713) TERM 1 2466 - 2448 - g 79 -10.3 -3.47941 | CACCAACTATGATAA GACGGTC AATGA GACCGTC AGCTATGTTGATCAG TERM 2 3309 - 3291 - g 79 -10.3 -3.47941 | CACCAACTATGATAA GACGGTC AATGA GACCGTC AGCTATGTTGATCAG TERM 3 4152 - 4134 - g 79 -10.3 -3.47941 | CACCAACTATGATAA GACGGTC AATGA GACCGTC AGCTATGTTGATCAG TERM 4 4995 - 4977 - g 79 -10.3 -3.47941 | CACCAACTATGATAA GACGGTC AATGA GACCGTC AGCTATGTTGATCAG LCK_p100001 73 - 6006 + | mucus binding protein LCK_p100003 6096 - 6455 + | transcription regulator TERM 5 6536 - 6497 - f 71 -5.6 -4.50159 | opp_overlap 6497, overlap 6500 CTTAATGTAAATAAA GATCGGTCCGTTAAAACC CTTG GGTTTGAGCAGGCCGGTC TTTTATTGAAGTGAA TERM 6 6497 - 6536 + F 100 -10 -4.65916 | opp_overlap 6497 6500 CTTAATGTAAATAAA GATCGGTCCGTTAAAACC CTTG GGTTTGAGCAGGCCGGTC TTTTATTGAAGTGAA LCK_p100004 6836 - 7399 + | site-specific recombinase, DNA invertase Pin-like protein LCK_p100005 7506 - 7766 + | ORFA of IS3-like IS TERM 7 7900 - 7885 - f 72 -4.7 -4.7629 | TTATCAATGGAAAAA TTGGC ATCCCA GCCAA CAAGAGACGCGTCGC LCK_p100006 8046 - 8438 + | ORFC of IS3-like IS LCK_p100007 8531 - 8409 - | site-specific recombinase, DNA invertase Pin-like protein TERM 8 8682 - 8696 + r 70 -4.3 -4.74767 | overlap 8685 AGGATTTACTCTCTG TGTCT AAATG AGACA TTTTGTATTAATTAT LCK_p100008 9903 - 8929 - | sortase (surface protein transpeptidase) TERM 9 9856 - 9830 - G 100 -5.3 -5.70829 | gap 1 AACAGTACAAAAAAA GCAATCAA-ACT AATA AGCGTTGATTGC ACATTGTACGACACT LCK_p100009 10436 - 9942 - | hypothetical protein LCK_p100010 10853 - 10455 - | Thiol-disulfide isomerase or thioredoxin LCK_p100011 10969 - 11088 + | transposase LCK_p100012 11110 - 11211 + | transposase LCK_p100013 11259 - 11405 + | transposase LCK_p100014 11451 - 11543 + | transposase TERM 10 11691 - 11712 + F 79 -3.8 -5.43414 | AGCTGATAAGCGAAT TCCAATGA CTAGTA TTATTGGA TTTTTTGTGTATACT LCK_p100015 11798 - 12202 + | protein-tyrosine-phosphatase LCK_p100016 12237 - 12398 + | hypothetical protein TERM 11 12432 - 12405 - f 100 -7.1 -6.17268 | opp_overlap 12405 TTAGAATAAAAAAAA CAGTGATTACT AAATGA AGTGATCACTG TTTTTTTTTTGTGTA TERM 12 12405 - 12432 + F 100 -9.3 -6.53504 | opp_overlap 12405 TTAGAATAAAAAAAA CAGTGATTACT AAATGA AGTGATCACTG TTTTTTTTTTGTGTA LCK_p100017 12551 - 12652 + | hypothetical protein TERM 13 12741 - 12760 + T 95 -8.6 -5.4182 | CTAATGACAACCATG GGACTAGT TTGA GCTAGTCC TTTTTATTTATACTT LCK_p100018 13381 - 13022 - | hypothetical protein repB2 14222 - 13383 - | replication-associated protein TERM 14 14456 - 14441 - R 72 -6.2 -4.28488 | opp_overlap 14443, overlap 14409 AGTTAAATATATAAA TAGTGA AATA TCACTA TTAAACAAATATGTT TERM 15 14560 - 14533 - R 95 -8.5 -5.33124 | opp_overlap 14541 AAGAATAAAAGAAAA GCCACCAAGGA TTGCCG TCCTTGATAGC TACATACATCTTATT TERM 16 14937 - 14950 + r 91 -5.2 -5.87996 | overlap 14939 AGTATAGTGATACAG CGCC AATAAG GGCG TTTTTTTATTGGTTC LCK_p100020 15951 - 15295 - | putative transcriptional regulator TERM 17 15527 - 15555 + g 86 -9 -4.40561 | ATGGCTTTTTTATTT GCCAATAACATG CCAGC CATATTATTGGC TTCTTTTTCAAAGAA TERM 18 15856 - 15868 + g 74 -6.3 -4.44211 | CCACCATTTCAGGTC TTGTG GAT CACAA TTATTTTCTGTTGCA LCK_p100021 16317 - 15952 - | Rep protein TERM 19 16148 - 16174 + g 74 -4.7 -4.87626 | gap 1, opp_overlap 16155 TAGTCCGTTGATGTA TTTA-AAACAGT TGCA ACTGTTTCTAAA TTTTTGGTATTAGGA TERM 20 16456 - 16441 - H 88 -6.1 -5.626 | TAGTTGATAAAAAAA GCCCA TGCAAT TGGGC GACATTTAATTTTAT TERM 21 16535 - 16521 - H 100 -7.1 -5.9218 | GAGAGAATAAAAAAA GGTGC GCAAG GCACC AGACGAAGTTATAAA LCK_p100022 17078 - 17269 + | hypothetical protein LCK_p100023 17217 - 17411 + | hypothetical protein TERM 22 17426 - 17456 + F 77 -3.5 -5.54338 | gap 1 ATGTAGTGTTGCTAA GAACATTTT-GATT GTTT AATCTAGAGTGTTC TTTTTATTTTGATTA LCK_p100024 17502 - 18200 + | hypothetical protein LCK_p100025 18222 - 18668 + | hypothetical protein TERM 23 18701 - 18678 - g 84 -2.4 -5.79595 | opp_overlap 18683 TGGTAAAACAAAAAA TTAAGCTGCC AAAA GTCAGTTTAA AGAACAATGGTAAGG LCK_p100026 18656 - 19750 + | DNA segregation ATPase FtsK/SpoIIIE TERM 24 19910 - 19889 - f 95 -12.3 -3.66908 | gap 1, overlap 19885 GCTGTGGAAAAGGAA GCGC-CCAGC TCT GCTGGTGCGC GACTGGTGGCGTTAG TERM 25 20221 - 20240 + G 90 -5 -5.56263 | GGACGAATGGTAGAA CGTATGAC TCCA GTTATGCG TTTTTATTTTGTCGT LCK_p100027 20172 - 20489 + | hypothetical protein ydcR 20470 - 21654 + | YdcR protein TERM 26 21720 - 21710 - g 80 -4.6 -5.20154 | opp_overlap 21714, overlap 21714 ACACAATTCAAAAAA GCAC TTA GCGC TACTGCAACCGAAGT LCK_p100029 21665 - 21979 + | hypothetical protein TERM 27 22650 - 22638 - g 73 -7.7 -3.7918 | AGATGATACCAATAA TGCCA CGT TGGCA AGCAGTGATAAAGTT LCK_p100030 21985 - 22956 + | hypothetical protein LCK_p100031 22966 - 23232 + | hypothetical protein LCK_p100032 23201 - 23668 + | hypothetical protein TERM 28 23691 - 23706 + F 73 -4.6 -4.86731 | opp_overlap 23691 AATCAGAAAGGATAA GCGCAA AAAT TAGCGC TTTTATTTACAAAAA TERM 29 24019 - 23987 - g 74 -4.2 -5.03145 | overlap 23990 CAACGGCTGAAAAAA GCACTGTACCAACA ACTGA TACTAGTACAGCAC AATCAATACAAGCCA LCK_p100033 23725 - 24870 + | SKN1 domain-containing protein TERM 30 24877 - 24893 + F 82 -4.3 -5.58074 | AAAAATTGATGAGTT CACACCT AAA GGGGGTG TTTTTTTAATGATTA LCK_p100034 24902 - 25423 + | TN916 ORF18-like protein LCK_p100035 25423 - 25614 + | hypothetical protein LCK_p100036 25677 - 28199 + | hypothetical protein TERM 31 28318 - 28334 + F 77 -8.7 -3.59087 | GAAAGGAAAAGCCTG GTGTCTG TTT CAGACGC TTTACAGCTCATGTT LCK_p100037 28318 - 28422 + | hypothetical protein TERM 32 28502 - 28523 + F 88 -7.3 -4.96848 | opp_overlap 28502 GCTATTGATGTTAAA GGGAGTAGT TCGA GCTACTTCC TTTTTCTATACACAA TERM 33 28596 - 28616 + G 90 -4 -5.88476 | overlap 28593 AATCAAATTTTGTCG GAAGCTGA TTATT TTGGCTTC TTTTTTGTTTGTTTT TERM 34 29519 - 29503 - g 93 -9.5 -5.12785 | CAACTAAAAAAGAAA TTTCCCA CAA TGGGAAA AAATAACTCATTTAA TERM 35 29725 - 29711 - g 85 -8.6 -4.4017 | opp_overlap 29711 GTAATGGGTATAAAA TCGTTG GCA CAACGA TTATGTGGGGCATTG TERM 36 29711 - 29725 + G 72 -8.6 -3.494 | opp_overlap 29711 GTAATGGGTATAAAA TCGTTG GCA CAACGA TTATGTGGGGCATTG TERM 37 29838 - 29850 + G 75 -2.7 -5.31855 | TGGATCCTATGCTGT CAATG CGT TATTG TTTTTCTTCTTAGTC LCK_p100038 28546 - 30648 + | peptide ABC transporter permease TERM 38 30683 - 30701 + GT 75 -3 -5.25699 | opp_overlap 30668, overlap 30684 CGCTACAATCGTTGT GGCAGTAG TAA CTACGGCG TTTTTATTGTATAAT LCK_p100039 30819 - 30694 - | hypothetical protein TERM 39 30884 - 30862 - gH 89 -5.6 -5.43621 | ATAAATTACAAAAAA TGCGTGATCA AAA TAATCAGGCA ACCATTGTCGTAGAT LCK_p100040 30645 - 31043 + | Thiol-disulfide isomerase or thioredoxin LCK_p100041 31012 - 31575 + | hypothetical protein LCK_p100042 31578 - 32108 + | hypothetical protein LCK_p100043 32108 - 32737 + | hypothetical protein TERM 40 32725 - 32747 + F 91 -4.3 -5.84381 | gap 1 TTTTAATACTTTTAA TCCTT-ATGA GTAA TCATTAAGGA TTTTTTTGTTAGTCA LCK_p100044 32813 - 34042 + | putative transfer protein LCK_p100045 33999 - 34724 + | hypothetical protein LCK_p100046 35308 - 35862 + | ORFC of IS3-like IS TERM 41 35894 - 35905 + F 70 -7.2 -3.86897 | CTTAATCTCGGTTAT CGGC ACTA GCCG TTTATGAGCCGTCAC TERM 42 35940 - 35952 + F 78 -7.7 -4.20367 | overlap 35923 GAATTTCACAAATTC GCCTT GTG AAGGC TTATTTGTTGCACGA LCK_p100047 36237 - 36719 + | hypothetical protein LCK_p100048 36780 - 37094 + | nucleotidyltransferase domain-containing protein LCK_p100049 37091 - 37579 + | hypothetical protein LCK_p100050 37646 - 38464 + | putative carbamoyl-phosphate synthase large chain SEQUENCE gi|170016358|ref|NC_010471.1| Leuconostoc citreum KM20, complete genome (length 1796284) TERM 1 1217 - 1207 - g 72 -3.2 -5.0538 | CGCCATTTTAAAAAA CCTC GCC GAGA CAGATGGTCTAACGA dnaA 347 - 1693 + | chromosomal replication initiator protein DnaA dnaN 1879 - 3012 + | DNA polymerase III, beta subunit TERM 2 3068 - 3101 + F 100 -16.9 -5.04385 | opp_overlap 3068, overlap 3099 CACTTATGCTTAAAA CGGCCTAAAATCGCT TAAA ATCGATTTTAGGCCG TTTTTTAAAGCTATC TERM 3 3101 - 3068 - f 100 -16.9 -4.11692 | opp_overlap 3068 3099 CACTTATGCTTAAAA CGGCCTAAAATCGCT TAAA ATCGATTTTAGGCCG TTTTTTAAAGCTATC LCK_00003 3153 - 3617 + | hypothetical protein recF 3599 - 4735 + | recombinational DNA repair ATPase (RecF pathway) TERM 4 5111 - 5100 - g 70 -5.8 -4.36262 | ACATCCAGACTAAAA CTGG CAAA CCAG CGCTTGAAACAGTCT TERM 5 6018 - 5996 - g 87 -8.4 -4.62336 | ATTTTAGCGCAAAAA GCGCGCTTAG CAG CTAAACGTGC GCGCGAAATGACACG gyrB 4757 - 6766 + | DNA gyrase, B subunit gyrA 6852 - 9407 + | DNA gyrase, A subunit TERM 6 9443 - 9422 - T 100 -13.1 -4.90869 | opp_overlap 9422 ATTAGCAATGAAAAA GCAGATGAC AAAC GTCATCTGC TTTTTGTTATGAAAT TERM 7 9422 - 9443 + T 100 -13.1 -5.19328 | opp_overlap 9422 ATTAGCAATGAAAAA GCAGATGAC AAAC GTCATCTGC TTTTTGTTATGAAAT pspC 9820 - 9569 - | putative stress-responsive transcriptional regulator LCK_00008 10021 - 9833 - | hypothetical protein LCK_00009 11378 - 10062 - | hypothetical protein LCK_00010 11725 - 11375 - | transcriptional regulator TERM 8 11795 - 11761 - H 79 -10.3 -2.87468 | opp_overlap 11768, overlap 11764 11768 TTTGAGTACATCATA TAACAAATTACTATG GTTGT CAAAGTAATTTGTTA GGCATAGTTTTAAAG TERM 9 11792 - 11764 - H 71 -7.6 -3.58365 | opp_overlap 11768, overlap 11761 11768 GAGTACATCATATAA CAAATTACTATG GTTGT CAAAGTAATTTG TTAGGCATAGTTTTA TERM 10 12536 - 12546 + G 74 -4 -5.10033 | TATGGCAAACTTATC TCAT CAT ATGA TTTTGTTTGTATTGG LCK_00011 12261 - 12758 + | hypothetical protein LCK_00012 13260 - 13754 + | major facilitator superfamily permease TERM 11 13937 - 13905 - g 80 -2 -5.65678 | overlap 13906 ACAAAAGATAAAAAA GGGTATCAAAGTTA TACGG TAACTACGACACCA GCGCTTTCAATGTCT LCK_00013 13779 - 14804 + | membrane-fusion protein LCK_00014 14797 - 15357 + | peptide ABC transporter ATPase TERM 12 16403 - 16428 + G 77 -4.9 -4.8622 | gap 1 GTATGGCAGTGGGTG CT-TCACAAAAT CAA ATTTTGTGGCAG TTTTTAATTGAGGCC LCK_00015 15472 - 16653 + | peptide ABC transporter permease TERM 13 16733 - 16689 - f 100 -16.1 -3.46602 | gap 1, opp_overlap 16699, overlap 16699 TTGTGCATAGCATAA GCAATAAAAAGCGTGGCGAC AATTAG GT-GCCACGCTTTTTATTAC CGGCAATACAGCTTT TERM 14 16699 - 16723 + F 100 -9.2 -5.06414 | opp_overlap 16689 16699 CATAAGCAATAAAAA GCGTGGCGAC AATTA GGTGCCACGC TTTTTATTACCGGCA TERM 15 16723 - 16699 - f 89 -7.9 -5.2204 | gap 1, opp_overlap 16699, overlap 16689 CATAAGCAATAAAAA GCGTGGCGAC AATTAG GT-GCCACGC TTTTTATTACCGGCA TERM 16 18152 - 18173 + G 75 -2.9 -5.34309 | opp_overlap 18153, overlap 18153 GCAATATGCGCAACA ACAGTGCGA GCTG TCACACTGG TTTTTGTTTGATGAT TERM 17 18172 - 18153 - g 73 -8.6 -3.65201 | opp_overlap 18152 18153 CAATATGCGCAACAA CAGTGCGA GCTG TCACACTG GTTTTTGTTTGATGA TERM 18 18637 - 18649 + G 86 -9.1 -4.41348 | TAGCTATGACGGCTA GCCAG GCT CTGGC TTTCTTTAAAAAACA LCK_00016 16812 - 19061 + | excinuclease ATPase subunit TERM 19 19067 - 19086 + T 89 -7.9 -5.36441 | opp_overlap 19067 TTTACCATAAAAAAA GCGATAC TATACC GTATCGC TTTTTTATATCAAAA TERM 20 19086 - 19067 - T 93 -7.9 -5.67063 | opp_overlap 19067 TTTACCATAAAAAAA GCGATAC TATACC GTATCGC TTTTTTATATCAAAA LCK_00017 19846 - 19109 - | transcriptional regulator TERM 21 19950 - 19987 + r 100 -15.1 -2.56914 | opp_overlap 19953 19961, overlap 19946 GATGCTTTCCCCACA TTACCATGCAACGTTTC ACAT GAAACATTGCGTGGTAA TCACTTAGTAGCCTC TERM 22 19984 - 19953 - R 86 -12.4 -2.62184 | opp_overlap 19950 19946, overlap 19961 GCTTTCCCCACATTA CCATGCAACGTTTC ACAT GAAACATTGCGTGG TAATCACTTAGTAGC TERM 23 19989 - 20011 + r 83 -7 -4.82901 | overlap 19946 ACATTGCGTGGTAAT CACTTAGTAG CCT CAGCTAAGTG TTTTTGTAACCAAAA LCK_00018 21346 - 19988 - | major facilitator superfamily permease TERM 24 20893 - 20873 - G 72 -8.9 -3.36581 | TAAAGTTTCAATCAA GGCGCCACC ATA GGTAGGGCC AAAAGAAGGTGCCAA LCK_00019 21778 - 21350 - | transcriptional regulator TERM 25 21834 - 21782 - H 87 -12.6 -3.14564 | gap 1, opp_overlap 21788, overlap 21787 21798 21801 TGATTCTGTCATGAA GTATACCCCTTTATAATAATTAGTT AGCT AACTAATTATTATAAAGAGTT-TAC TCTCCCAGTGCAAGT TERM 26 21830 - 21787 - H 89 -13.6 -2.93723 | opp_overlap 21788, overlap 21782 21798 21801 CTGTCATGAAGTATA CCCCTTTATAATAATTAGTT AGCT AACTAATTATTATAAAGAGT TTACTCTCCCAGTGC TERM 27 21788 - 21829 + H 100 -14.9 -3.83502 | opp_overlap 21787 21782 21798 21801 TGTCATGAAGTATAC CCCTTTATAATAATTAGTT AGCT AACTAATTATTATAAAGAG TTTACTCTCCCAGTG TERM 28 22473 - 22507 + G 78 -2.8 -5.4756 | opp_overlap 22477, overlap 22476 22477 AAGAAATACTTGATG AAATGCTAGGTCGTGT ATC ACAAGGCCTACCGTTG TTTTTTGTTCAAGTT TERM 29 22476 - 22504 + G 72 -4.5 -4.81306 | opp_overlap 22477, overlap 22473 22477 AAATACTTGATGAAA TGCTAGGTCGTGT ATC ACAAGGCCTACCG TTGTTTTTTGTTCAA LCK_00020 22106 - 22786 + | metal-dependent membrane protease TERM 30 22803 - 22820 + F 86 -2.6 -5.8187 | opp_overlap 22803 CACATATCATTAAAA GCCATG ATTAAG CAGGGC TTTTTTTATTGCATA TERM 31 22997 - 22983 - g 72 -3.6 -5.1101 | TGAGGAGTTAAAAAA TGAAAA ATG TCTTCA AATCACAGCTTAGTG TERM 32 23835 - 23824 - g 70 -3 -5.09895 | CATTCATTCAAAAAA TCAA ACGA TTGA GCAGTGGTACCGTAT LCK_00021 22982 - 23881 + | ABC transporter ATPase TERM 33 24509 - 24497 - g 83 -6.3 -5.02476 | ATATTGTGCAAAAAA TGATG AAT CATCA ACGTTGGGAAGTATC LCK_00022 23878 - 24636 + | ABC-type multidrug transport system, permease component TERM 34 24661 - 24679 + T 100 -11.8 -5.60993 | opp_overlap 24661 ATAAGCAATAAAAAA GAATGTGC TAA GCACATTC TTTTTTTATAAGACG TERM 35 24679 - 24661 - T 100 -11.8 -5.57396 | opp_overlap 24661 ATAAGCAATAAAAAA GAATGTGC TAA GCACATTC TTTTTTTATAAGACG LCK_00023 25449 - 24685 - | integral membrane protein LCK_00024 26461 - 25523 - | major facilitator superfamily permease TERM 36 26553 - 26522 - R 90 -8.2 -5.08601 | gap 1, opp_overlap 26522, overlap 26547 TCATTTTAACAAAAA GATTCAACATGTTGA CAT TCA-CAAGTTGAATC TTTTTCAAGGACAGA TERM 37 26522 - 26553 + r 84 -8.2 -4.56597 | gap 1, opp_overlap 26522 26547 TCATTTTAACAAAAA GATTCAACATGTTGA CAT TCA-CAAGTTGAATC TTTTTCAAGGACAGA LCK_00025 27334 - 26558 - | transcriptional regulator TERM 38 26733 - 26771 + g 91 -9.8 -4.57073 | GCTGTTGTAATGTCA TAGTTATCAAAAAAAGGT GCG GCCCATTTTTGATAACTA TTTTTAAGAAAAGTG TERM 39 27686 - 27662 - H 85 -8.6 -4.12188 | opp_overlap 27653 27662 GTACCACGGTTAAAA CCGTCCTATA GTATT TATAGGGCGG TTTTTGCTATCCACA TERM 40 27662 - 27686 + H 100 -11.5 -4.8048 | opp_overlap 27662, overlap 27653 GTACCACGGTTAAAA CCGTCCTATAG TAT TTATAGGGCGG TTTTTGCTATCCACA TERM 41 27967 - 27983 + G 75 -9.5 -3.40403 | opp_overlap 27970, overlap 27970 GTGATCCACGGCCAA CAACTGA ACG TCAGTTG TTATCGTCAGAACAA tyrS 27723 - 28970 + | tyrosyl-tRNA synthetase TERM 42 28972 - 28998 + F 73 -9.5 -2.84878 | opp_overlap 28972 28977, overlap 28977 GTAAAATTAAGTAAA CAAAAGCACGC TTTTT GCGTGCTTTTA ATTTAAATTAAAAAG TERM 43 28998 - 28972 - f 93 -11.7 -4.07675 | opp_overlap 28972 28977, overlap 28977 GTAAAATTAAGTAAA CAAAAGCACGC TTTTT GCGTGCTTTTA ATTTAAATTAAAAAG TERM 44 28993 - 28977 - f 100 -9.4 -5.00851 | opp_overlap 28972 28977, overlap 28972 ATTAAGTAAACAAAA GCACGC TTTTT GCGTGC TTTTAATTTAAATTA TERM 45 28977 - 28993 + F 93 -9.4 -4.5852 | opp_overlap 28977 28972, overlap 28972 ATTAAGTAAACAAAA GCACGC TTTTT GCGTGC TTTTAATTTAAATTA ddh 29025 - 30014 + | lactate dehydrogenase LCK_00028 30019 - 30882 + | 3-hydroxyisobutyrate dehydrogenase TERM 46 30983 - 30958 - T 72 -4.8 -4.77438 | opp_overlap 30958 30951 AGTTATCATTAAAAA GCCTTGAT TTTCTGTATC ATCAAGGC TTTTTATATAGCTTA TERM 47 30958 - 30983 + T 75 -4.8 -5.00642 | opp_overlap 30958, overlap 30951 AGTTATCATTAAAAA GCCTTGAT TTTCTGTATC ATCAAGGC TTTTTATATAGCTTA LCK_00029 32574 - 31114 - | gamma-glutamylcysteine synthetase TERM 48 32810 - 32820 + G 70 -5.4 -4.371 | GCCCTAACATGGTCG GCTT TTG AAGC TTTTGCTATGATAAG LCK_00030 32765 - 33499 + | hypothetical protein TERM 49 33710 - 33695 - g 70 -3.2 -5.00616 | overlap 33696 GGTTGGGTCAAAAAA GCCCAA ATCG TTGGGA CTGACATGAATGGCA TERM 50 33808 - 33790 - g 72 -4.6 -4.79174 | ACTCAAGGAAGAAAA CGAAATTT TAA AAATTGCG GCCGTTTTGCTGGGC LCK_00031 33563 - 33838 + | transposase LCK_00032 33895 - 34665 + | transposase LCK_00033 34708 - 35301 + | signal transduction protein LCK_00034 35307 - 36023 + | response regulator TERM 51 37373 - 37389 + G 72 -9.4 -2.92858 | opp_overlap 37372 37371 37369, overlap 37372 TTGGGTAATAAGAGC GCACCG TTTGC CGGTGC ATTTGATATCCTTCG TERM 52 37917 - 37934 + G 71 -6.3 -4.18494 | overlap 37920 CAGTTATTCCAAGGC CAGGTGT TAAT ACACTTG TTTTACGTGAAGGTG LCK_00035 36128 - 37984 + | dehydrogenase (flavoprotein) LCK_00036 38083 - 38904 + | HAD superfamily hydrolase TERM 53 38886 - 38919 + T 84 -11.9 -2.87136 | opp_overlap 38886 38891, overlap 38891 TTTAACGATACTAGA CAAAAGCAGTGTGAG TTAA TTCACACTGCTTTTA TATGCTCATTGATAA TERM 54 38919 - 38886 - T 89 -13.4 -2.89267 | opp_overlap 38886 38891, overlap 38891 TTTAACGATACTAGA CAAAAGCAGTGTGA GTTAAT TCACACTGCTTTTA TATGCTCATTGATAA TERM 55 38891 - 38914 + T 100 -11.8 -4.59027 | opp_overlap 38891 38886, overlap 38886 CGATACTAGACAAAA GCAGTGTGAG TTAA TTCACACTGC TTTTATATGCTCATT TERM 56 38914 - 38891 - T 100 -11.1 -4.5954 | opp_overlap 38886 38891, overlap 38886 CGATACTAGACAAAA GCAGTGTGA GTTAAT TCACACTGC TTTTATATGCTCATT LCK_00037 39559 - 38906 - | esterase/lipase TERM 57 39867 - 39880 + r 87 -6.7 -5.49729 | opp_overlap 39867 AATGGCAATAAAAAA GACCT GTTA AGGTC TTTTTTTAAATAGTT TERM 58 39880 - 39867 - R 87 -6.7 -5.4756 | opp_overlap 39867 AATGGCAATAAAAAA GACCT GTTA AGGTC TTTTTTTAAATAGTT LCK_00038 40425 - 39886 - | periplasmic/secreted protein LCK_00039 40981 - 40466 - | hypothetical protein TERM 59 41282 - 41306 + r 76 -3.6 -5.26119 | gap 1, overlap 41283 AATATATTTTCTTTC TCCCGTAT-TG TTAA CAGATGCGGGG TTTTGTTTTTACAAA TERM 60 41325 - 41356 + r 85 -6.5 -5.27399 | opp_overlap 41325 41329 TGTTTTTACAAAAAA GCCAGTAGACGCT ACCATG ACCGTCAGCTGGC TTTTTTAATGTGTTG TERM 61 41356 - 41325 - R 79 -4.3 -5.24129 | opp_overlap 41325, overlap 41329 TGTTTTTACAAAAAA GCCAGTAGACGCT ACCATG ACCGTCAGCTGGC TTTTTTAATGTGTTG LCK_00040 41918 - 41361 - | hypothetical protein LCK_00041 42191 - 42580 + | transcriptional regulator TERM 62 42720 - 42741 + G 83 -9.5 -3.84648 | opp_overlap 42701, overlap 42738 ATTGTTTGGGACACT GTCAGGTGA GTTA TTACCTGAC TTTGGTCGTGTTGGA LCK_00042 42577 - 43482 + | ABC-type multidrug transport system, ATPase component TERM 63 43530 - 43517 - g 79 -5.3 -5.1166 | CATGAAAATCAAAAA GAATC AACT GATTC TAGCATTAAGTTTAG TERM 64 44236 - 44267 + G 73 -8.2 -3.93913 | gap 1, opp_overlap 44244, overlap 44242 AATTGTTTGATTTGT TGTTAACACCAGCTA TTT TAACTGGTGTT-ACA TTTACGTTTGTATTT TERM 65 44242 - 44262 + G 70 -8.3 -3.31853 | opp_overlap 44244, overlap 44236 TTGATTTGTTGTTAA CACCAGCTA TTT TAACTGGTG TTACATTTACGTTTG LCK_00043 43479 - 44315 + | hypothetical protein LCK_00044 44338 - 45243 + | ABC-type multidrug transport system, ATPase component LCK_00045 45249 - 46016 + | ABC-type transport system involved in multi-copper enzyme maturation, permease component TERM 66 46056 - 46018 - T 100 -14.3 -3.53091 | gap 1, opp_overlap 46020 46025, overlap 46025 AGCGTTCTGTTTAAA TAA-AAAAGCGTTGTTTC ATGT GAAACAACGCTTTTCTTA TTAGAAGTCAGCCTT TERM 67 46020 - 46053 + T 100 -14.1 -3.63515 | opp_overlap 46018 46025, overlap 46025 CGTTCTGTTTAAATA AAAAAGCGTTGTTTC ATGT GAAACAACGCTTTTC TTATTAGAAGTCAGC TERM 68 46048 - 46025 - T 100 -14 -5.63517 | opp_overlap 46020 46025, overlap 46018 TGTTTAAATAAAAAA GCGTTGTTTC ATGT GAAACAACGC TTTTCTTATTAGAAG TERM 69 46025 - 46048 + T 100 -14 -4.89477 | opp_overlap 46025 46018, overlap 46020 TGTTTAAATAAAAAA GCGTTGTTTC ATGT GAAACAACGC TTTTCTTATTAGAAG LCK_00046 46917 - 46057 - | aldo/keto reductase LCK_00047 47917 - 47030 - | ABC-type metal ion transport system, periplasmic component/surface adhesin TERM 70 47491 - 47508 + g 74 -6.3 -4.32436 | overlap 47492 TTTTTGACAAATCAT TGGCTAA ATAG TTAGCCG TTTTAATCATCGTAT adcR 48354 - 47914 - | transcriptional repressor for Zn(2+)-responsive expression TERM 71 48224 - 48253 + g 72 -3.5 -5.13354 | overlap 48225 GCGTGCTGTGTTTTA AGCAACATGAGCA AATG TGCTTGGGTTGCA TTTATTTTTTGTGCC LCK_00049 48648 - 49268 + | hypothetical protein LCK_00050 49284 - 49874 + | ABC-type multidrug transport system, ATPase component TERM 72 51326 - 51300 - g 73 -8 -3.80733 | opp_overlap 51300 51299 51303, overlap 51305 CCGATTGCATAATAA TGACACGCTTGA AAA TCAAGCGGGTGA ATTAGTTGCTGATTC TERM 73 51303 - 51323 + G 70 -9.7 -2.61216 | opp_overlap 51300 51305, overlap 51300 51299 ATTGCATAATAATGA CACGCTTGA AAA TCAAGCGGG TGAATTAGTTGCTGA TERM 74 51321 - 51305 - g 78 -10.9 -3.04443 | opp_overlap 51303 51300 51299, overlap 51300 TGCATAATAATGACA CGCTTGA AAA TCAAGCG GGTGAATTAGTTGCT TERM 75 51833 - 51822 - g 73 -5.8 -4.55625 | ACGAACAGCACAAAA GGTG ACTG CACC ACAACTTAATCGTAA LCK_00051 50047 - 51864 + | Ser/Thr protein phosphatase family protein TERM 76 51892 - 51870 - T 100 -15 -5.7946 | opp_overlap 51870 TGTTGAATAAAAAAA GAAGACTAGC TTA GCTAGTCTTC TTTTTTTATTTTATT TERM 77 51870 - 51892 + T 100 -15 -6.17669 | opp_overlap 51870 TGTTGAATAAAAAAA GAAGACTAGC TTA GCTAGTCTTC TTTTTTTATTTTATT zwf 53366 - 51906 - | glucose-6-phosphate 1-dehydrogenase LCK_00053 54403 - 53522 - | carboxylesterase TERM 78 53842 - 53854 + g 76 -3.4 -5.24129 | CCACTGGAATGCCTT TACC ATCAG GGTA TTTTTTATCAGCGGC LCK_00054 55190 - 54387 - | acetylesterase TERM 79 54733 - 54721 - G 71 -4.1 -4.91109 | CGTTTATCATAAAAA TCAAC TAA GTCGA CAACACCTGATAAAG TERM 80 55122 - 55146 + g 70 -7.9 -3.69684 | TTCACGCCTTTCGGG GATGATAGCAG AAA CTTCTGTCATC TTATTAAGTACGTTT LCK_00055 56225 - 55221 - | lipase/esterase TERM 81 57547 - 57562 + G 74 -9 -3.56821 | overlap 57520 57544 TTTCTGCCATTGGTG CCAGCA TTGG TGCTGG TTTAGCAGGTGTGAT LCK_00056 56436 - 57797 + | Na+:melibiose symporter LCK_00057 57800 - 58576 + | alpha/beta fold family hydrolase sacR 58596 - 59594 + | sucrose operon repressor TERM 82 59609 - 59581 - f 79 -9 -3.79113 | opp_overlap 59588, overlap 59588 ATCGTGGGACAACAA CAAAAAACGCCT AATAA AGGCGTTTTTTT AGTGGTCACCATGAC TERM 83 59588 - 59602 + F 93 -7.1 -5.55664 | opp_overlap 59588 59581 GACAACAACAAAAAA CGCCT AATAA AGGCG TTTTTTTAGTGGTCA TERM 84 59602 - 59588 - f 93 -7.1 -5.68489 | opp_overlap 59588, overlap 59581 GACAACAACAAAAAA CGCCT AATAA AGGCG TTTTTTTAGTGGTCA LCK_00059 59674 - 60873 + | major facilitator superfamily permease TERM 85 61084 - 61112 + F 100 -13.9 -5.88565 | TTTAATTGTCAATTC GTCCCTTCTGTCA TTA TGACAGCGGGGAC TTTTTTTATTATAAA TERM 86 61146 - 61131 - f 74 -3.2 -5.31275 | TTTTATTATAAAAAA CATCAG GTAA CTGGTG ACGACAGGAGAAAAT TERM 87 62166 - 62192 + G 70 -8 -3.65812 | overlap 62156 TCATGGCGCCGATTG TGGCACATTTAC GTA GTCAACGTGCCA TTGTGTTAGCGACAC nhaC 61163 - 62518 + | Na+:H+ antiporter NhaC TERM 88 62609 - 62644 + T 100 -15.6 -4.2558 | opp_overlap 62609 AATGGCATACAAAAA GCCCACCTCATTTGGA TTAC TCTAAATCAGGTGGGC TTTTGCTAGGGCATG TERM 89 62644 - 62609 - T 100 -13.4 -4.98522 | opp_overlap 62609 AATGGCATACAAAAA GCCCACCTCATTTGGA TTAC TCTAAATCAGGTGGGC TTTTGCTAGGGCATG LCK_00061 63667 - 62675 - | hypothetical protein LCK_00062 63795 - 64619 + | transcriptional regulator LCK_00063 64666 - 65130 + | tellurite resistance protein TERM 90 65164 - 65186 + T 71 -3.5 -5.11613 | opp_overlap 65164 CAATGCAGAAAAAAA CACTTTC TTATTCAGT GAAAGTG TTTTTTCGATACTAT TERM 91 65186 - 65164 - T 82 -3.5 -5.66684 | opp_overlap 65164 CAATGCAGAAAAAAA CACTTTC TTATTCAGT GAAAGTG TTTTTTCGATACTAT LCK_00064 65595 - 65278 - | hypothetical protein LCK_00065 65913 - 65596 - | hypothetical protein LCK_00066 66468 - 65980 - | hypothetical protein LCK_00067 66673 - 66473 - | helix-turn-helix motif-containing protein LCK_00068 66849 - 67505 + | phosphoglycerate mutase TERM 92 67889 - 67905 + G 85 -5.8 -5.24449 | opp_overlap 67889, overlap 67899 ATGTGTCACCAGAAC GCTTGG AAATC CCGAGC TTTTTTGGGTTTATC TERM 93 68410 - 68400 - g 73 -6.8 -4.18934 | opp_overlap 68400 TATGATTGCAACAAA TGCC TTT GGCA TGGGCATTAATAAAC recQ 67525 - 69342 + | ATP-dependent DNA helicase RecQ TERM 94 69363 - 69378 + F 93 -7.6 -5.60993 | opp_overlap 69363 AGTTTGACCCAAAAA GGTAAC GCTT GTTACC TTTTTTTGTGCACAA TERM 95 69378 - 69363 - f 83 -7.6 -4.66163 | opp_overlap 69363 AGTTTGACCCAAAAA GGTAAC GCTT GTTACC TTTTTTTGTGCACAA xynT 69625 - 70668 + | xyloside transporter LCK_00071 70747 - 71094 + | putative sodium:solute symporter xynB 71136 - 72824 + | Beta-xylosidase TERM 96 72844 - 72864 + F 93 -8.3 -5.68489 | CCGATAACCTTTAGG CGAGCCTTT ATC AAAGGGTCG TTTTTTGTTGTTATA TERM 97 73528 - 73515 - g 71 -6.7 -4.03234 | opp_overlap 73515 TTGGCTGTAGATAAA GTACC AATT GGTAC TTTATCGCCAAATCA LCK_00073 72900 - 73925 + | galactose mutarotase xylR 73950 - 75119 + | xylose repressor TERM 98 75111 - 75148 + F 83 -10.8 -3.02144 | opp_overlap 75109 75108, overlap 75114 CTAGATTTGAAATTT GGACACTAAGTAAACA GCTTGG TGTTTTTTTAGTGTCC TATTCAAAAGGGTAC TERM 99 75114 - 75134 + F 84 -4 -5.59357 | opp_overlap 75109 75108, overlap 75111 GATTTGAAATTTGGA CACTAAGT AAACA GCTTGGTG TTTTTTTAGTGTCCT TERM 100 75710 - 75697 - g 72 -3.1 -5.07107 | GAAACTGGGAAAAAA GTGCT ATGG AACAC ATCATCTTTGTTCAC xylA 75283 - 76629 + | xylose isomerase xylB 76765 - 78276 + | xylulokinase TERM 101 78472 - 78509 + F 100 -14.4 -4.77165 | gap 1, opp_overlap 78484, overlap 78501 CATTTAGCATTTCAT GGCGTTGCAT-AAGGTT GCAAA AACCTTGATGCAGCGCC TTTTCTTATGAAAAA TERM 102 78607 - 78620 + F 86 -5.2 -5.63517 | opp_overlap 78598, overlap 78598 AAGTAAGCAGTGTAA CGGC ATTTAA GCCG TTTTTTATTTACAAA LCK_00077 78753 - 78935 + | hypothetical protein TERM 103 79242 - 79283 + F 77 -6 -4.74706 | AACGGTTGGGCGTAA GCTTCAAGAATGGTTAGT CGGGGA ACTAGCTGTTTTTGGGGC TTTTTAAATGTTAGG LCK_00078 79291 - 80268 + | Kef-type K+ transport system, membrane component TERM 104 80370 - 80390 + F 83 -4.7 -5.40464 | opp_overlap 80366, overlap 80368 CATTTAAGATATTCT GCATTGC AGTAAAA GCAGTGC TTTTTGTTTGTAATA TERM 105 80821 - 80847 + F 76 -9.6 -2.94912 | overlap 80823 AACATTTATGGTTAT TAGCATGTTTTG TTG TAAGACATGCTA TATGTACATTACAAA wzb 81009 - 81422 + | protein-tyrosine-phosphatase TERM 106 81529 - 81503 - T 83 -10.2 -3.15129 | opp_overlap 81502 81501 81503, overlap 81501 CTAATCAATAAATTA GCCGTTATCACT CAG AGTGATAGCGAC CTGTTTTACATATGT TERM 107 81503 - 81529 + T 79 -10.2 -2.83068 | opp_overlap 81503 81501, overlap 81502 81501 CTAATCAATAAATTA GCCGTTATCACT CAG AGTGATAGCGAC CTGTTTTACATATGT LCK_00080 81882 - 81595 - | YCII-related protein TERM 108 82223 - 82213 - R 73 -4.6 -4.95155 | TGGACACCATAAAAA GGGA CAT CCCC AAATAAAAAGAATTA TERM 109 82269 - 82255 - R 80 -5 -5.38249 | ACGAACCATAAAAAA TCAGAT TAT ATCCGA ATACCCAGAACTTGA TERM 110 82431 - 82456 + r 70 -4.6 -4.7373 | opp_overlap 82432, overlap 82432 AATAGACACAATAAA ACCACGCCCT TTAACT AGAGCGTGGC TTTTTAATGAGATAG TERM 111 82432 - 82455 + r 72 -8.1 -3.43756 | opp_overlap 82432, overlap 82431 ATAGACACAATAAAA CCACGCCCT TTAACT AGAGCGTGG CTTTTTAATGAGATA TERM 112 82455 - 82432 - R 100 -10.3 -4.88495 | opp_overlap 82432 82431 ATAGACACAATAAAA CCACGCCCT TTAACT AGAGCGTGG CTTTTTAATGAGATA TERM 113 82743 - 82772 + r 90 -8 -4.84359 | opp_overlap 82731 82748 82749, overlap 82738 82741 82748 TTACATTTAGCGTTG CAAAACGTTGCA TTTCGT TGCAACATTTTG TTTTTGTACGAGTGG TERM 114 82748 - 82767 + r 70 -2.1 -5.35224 | opp_overlap 82731 82748 82749, overlap 82738 82741 82743 TTTAGCGTTGCAAAA CGTTGCA TTTCGT TGCAACA TTTTGTTTTTGTACG TERM 115 82858 - 82839 - R 80 -2.8 -5.69793 | opp_overlap 82839 AGACCAAATAAAAAA CGTCCTGA CAGA TTAAGACG CTTTAGATGTAGTAC TERM 116 82978 - 82946 - R 93 -7.7 -5.46629 | overlap 82949 AATATTGCAAAAAAA TAAGAGCCAACTCAC AAT GTGGGTCAGCTCGTA GAAACAAATTAATAT TERM 117 82975 - 82949 - R 100 -9.4 -4.80853 | overlap 82946 ATTGCAAAAAAATAA GAGCCAACTCAC AAT GTGGGTCAGCTC GTAGAAACAAATTAA TERM 118 83902 - 83916 + r 81 -10 -3.36968 | opp_overlap 83893 83894 83891 TAAATATTTATGTAC GCACTC TGT GAGTGC TTATAAAATTAACTA LCK_00081 84233 - 83925 - | hypothetical protein LCK_00082 84927 - 84427 - | hypothetical protein LCK_00083 85296 - 85018 - | hypothetical protein LCK_00084 85677 - 85309 - | transcriptional regulator TERM 119 85608 - 85632 + g 95 -8.6 -5.50723 | ACGCCTCGATTTTAT CAGCTAACCC TTGTT GAGTTAGCTG TTTTTGTTTTCGTAA LCK_00085 85942 - 86199 + | hypothetical protein LCK_00086 86306 - 86467 + | hypothetical protein LCK_00087 86469 - 86735 + | hypothetical protein LCK_00088 87026 - 87346 + | Phage protein LCK_00089 87588 - 88358 + | prophage Lp3 protein 7-like protein LCK_00090 88345 - 89748 + | DNA primase LCK_00091 90018 - 90176 + | hypothetical protein LCK_00092 90186 - 90530 + | hypothetical protein LCK_00093 91700 - 90930 - | transposase LCK_00094 92032 - 91757 - | transposase TERM 120 91787 - 91805 + g 72 -4.6 -4.79174 | GCCCAGCAAAACGGC CGCAATTT TTA AAATTTCG TTTTCTTCCTTGAGT TERM 121 91885 - 91900 + g 70 -3.2 -5.00616 | overlap 91886 TGCCATTCATGTCAG TCCCAA CGAT TTGGGC TTTTTTGACCCAACC LCK_00095 92051 - 92344 + | phage integrase family site specific recombinase TERM 122 92427 - 92464 + T 100 -10.8 -4.77165 | gap 1 CATTTAGCATTTCAT GGCGTTGCAT-AAGGTT GCAAA AATCTTGATGCAGCGCC TTTTCTTATGAAAAA TERM 123 92908 - 92918 + T 95 -6.8 -5.94214 | opp_overlap 92908 92906 TAAATTCTATCAAGA GCCT GTT AGGC TTTTTTTGTTGTCTT TERM 124 92989 - 92950 - T 82 -8.7 -3.91716 | opp_overlap 92950 92958, overlap 92953 92958 TTATGCTTCAAACAA TAATAAAAGCCCCTGAC GTAGTT GTCGGAGGCTTTTTTTA TTTGTCTTAGTTGTA TERM 125 92950 - 92989 + T 93 -9.4 -4.29327 | opp_overlap 92950 92953 92958, overlap 92958 TTATGCTTCAAACAA TAATAAAAGCCCCTGACG TAGT TGTCGGAGGCTTTTTTTA TTTGTCTTAGTTGTA TERM 126 92981 - 92958 - T 83 -5.9 -5.04082 | opp_overlap 92950 92958, overlap 92953 92950 CAAACAATAATAAAA GCCCCTGAC GTAGTT GTCGGAGGC TTTTTTTATTTGTCT TERM 127 92958 - 92981 + T 100 -6.6 -6.04953 | opp_overlap 92958 92953 92950, overlap 92950 CAAACAATAATAAAA GCCCCTGACG TAGT TGTCGGAGGC TTTTTTTATTTGTCT LCK_00096 93476 - 93261 - | hypothetical protein LCK_00097 94157 - 93999 - | hypothetical protein TERM 128 94666 - 94651 - g 72 -3.2 -5.13722 | CGTAGGAAAATAAAA TGAACG TGAT CGTGCA TATCGATGAAACAAA LCK_00098 94650 - 94874 + | hypothetical protein TERM 129 95007 - 95035 + T 76 -4 -5.26875 | gap 1, opp_overlap 95007 ATGACATTAAAAAAA GATCATCAACTAT TATG AT-GTTGACGATC TTTTTTAATTGCGAC TERM 130 95035 - 95007 - T 88 -6.2 -5.59357 | gap 1, opp_overlap 95007 ATGACATTAAAAAAA GATCATCAACTAT TATG AT-GTTGACGATC TTTTTTAATTGCGAC LCK_00099 96254 - 95085 - | transport protein TERM 131 95364 - 95352 - G 76 -9.1 -3.65738 | ATCAAAGAATGATAA TGCCG CGC CGGCA ATTAAAATAATGGGA TERM 132 95738 - 95720 - G 72 -10.4 -2.73441 | overlap 95719 CATCATCGGGCAAAT GTTTTCGT AAG ACGAAAAC GTACAACGCCAATAC LCK_00100 97063 - 96323 - | ADP-ribose pyrophosphatase LCK_00101 97370 - 97948 + | carbon starvation protein, membrane protein TERM 133 97958 - 97969 + F 100 -7.2 -5.97979 | opp_overlap 97958 TCATAATATTGGAAA CGGC TGTC GCCG TTTTTTTATTGTTAT LCK_00102 98041 - 98532 + | hypothetical protein TERM 134 98537 - 98560 + T 100 -9.6 -5.28481 | opp_overlap 98537 CATATATTTAAAAAA GTGCTTGGTT TTAT ACCCAAGCAC TTTTTTAATTGCCTC TERM 135 98560 - 98537 - T 100 -9.6 -5.14477 | opp_overlap 98537 CATATATTTAAAAAA GTGCTTGGTT TTAT ACCCAAGCAC TTTTTTAATTGCCTC LCK_00103 99245 - 98565 - | hypothetical protein TERM 136 99668 - 99650 - g 79 -9.6 -3.75024 | CGTTATCATCAACAA TGCTGGTG TAG CACCAACA ACCCCTATCATGGCG LCK_00104 99393 - 100163 + | dehydrogenase TERM 137 100188 - 100217 + T 100 -12.4 -5.59534 | opp_overlap 100188 AACTTGAATAAAAAA GCAGTTAAATGA CATTGA TCATTTAACTGC TTTTTTATTGTCATT TERM 138 100217 - 100188 - T 100 -13.1 -5.4756 | opp_overlap 100188 AACTTGAATAAAAAA GCAGTTAAATGAC ATTG ATCATTTAACTGC TTTTTTATTGTCATT LCK_00105 101172 - 100231 - | regulatory protein TERM 139 101325 - 101313 - H 82 -3.5 -5.64274 | CTATTTATAAAAAAA TATTT AAA AAATA TCAATAAAAATCGTT LCK_00106 101430 - 102590 + | malic enzyme citC 102590 - 103645 + | citrate lyase ligase TERM 140 103662 - 103651 - g 100 -5.8 -5.72207 | TGGAAATTAAAAAAA CTGC GATG GCAG GAACGTTAGAATCTT citD 103635 - 103928 + | citrate lyase acyl carrier protein citE 103928 - 104839 + | putative beta subunit of citrate lyase TERM 141 104937 - 104922 - g 70 -9 -3.12803 | overlap 104920 104930 TATGGACACCCAATA GCGCAA AGGG TTGCGC CCAAGGTTCGTGCAA cilA 104829 - 106367 + | citrate lyase alpha chain TERM 142 106390 - 106375 - f 81 -7.6 -4.38774 | AAGACTAGACTAAAA CGAATC GAAA GATTCG TGTACATAAAAATAA TERM 143 106974 - 106946 - g 89 -4.6 -5.63504 | gap 1, overlap 106960 AACTGTATAAAAAAA TGGCCACA-ACAC CATT GCGTATCTGGCCA CAAACGCAAGCAGCA citXG 106423 - 107817 + | protein citXG LCK_00112 107817 - 108611 + | CitR protein TERM 144 109724 - 109714 - g 81 -5.4 -5.14965 | opp_overlap 109716 ATTGGTAGTAAAAAA CATG ACA CATG CCTTGTTAGCGGGTG LCK_00113 108722 - 110050 + | citrate-sodium symport TERM 145 110041 - 110092 + F 77 -4.7 -5.04175 | opp_overlap 110056, overlap 110043 110054 TATTCTTGTGAGTTT TATGCACTAAAAAGTCTAAAGAT TAGCAT ATTTTTAGGCTTTTTTTTGCACA TTTTTATCTGATTAG TERM 146 110054 - 110079 + F 89 -3.4 -5.77853 | opp_overlap 110056, overlap 110043 110041 TTTATGCACTAAAAA GTCTAAAGAT TAGCAT ATTTTTAGGC TTTTTTTTGCACATT TERM 147 110487 - 110477 - g 70 -3.2 -4.96501 | GCCGAGAAAAATAAA CCAG TGG CTGA TGTGATATACGGTTC TERM 148 111093 - 111063 - g 76 -6.8 -4.3129 | overlap 111065 CAGGCAGCAGCAAAA CAGCCGAAGCATTT GCC AACTGGTTCGGCAG CGCTAAATTTCAAGC TERM 149 111091 - 111065 - g 70 -8 -3.7574 | overlap 111063 GGCAGCAGCAAAACA GCCGAAGCATTT GCC AACTGGTTCGGC AGCGCTAAATTTCAA LCK_00114 110186 - 111283 + | ABC transporter LCK_00115 111297 - 112301 + | ABC transporter, ATP-binding protein LCK_00116 112294 - 112713 + | binding-protein dependent transport system inner membrane protein LCK_00117 112753 - 114021 + | binding-protein dependent transport system inner membrane protein LCK_00118 114034 - 114903 + | glycerophosphoryl diester phosphodiesterase TERM 150 115023 - 115009 - f 76 -6.4 -4.4767 | opp_overlap 115009 115022, overlap 115022 TCACTTATTATAAAA GCGCTT ACA AAACGC TTTATATAAGCTATT adhE 115132 - 117834 + | alcohol dehydrogensae TERM 151 117864 - 117879 + F 88 -6.2 -5.67283 | opp_overlap 117864 TAAATTTTTCAGAAA GCAAAA GAAA TTTTGC TTTTTTGTTTGCATT LCK_00120 117958 - 120330 + | hypothetical protein TERM 152 120443 - 120427 - g 77 -8.1 -4.29396 | opp_overlap 120426 AATTACCTATTAAAA GTTACTT ATT AAGTAAC CGTTTAGAGGTATCA LCK_00121 120345 - 120845 + | transcriptional regulator TERM 153 120843 - 120862 + F 100 -12.2 -5.89947 | opp_overlap 120843 120846 CAAGCCATGGTGAAA TAACGGCG TATG CGCCGTTA TTTTTTTTGAGTTTC TERM 154 120862 - 120843 - f 91 -12.2 -3.58269 | opp_overlap 120843, overlap 120846 CAAGCCATGGTGAAA TAACGGCG TATG CGCCGTTA TTTTTTTTGAGTTTC TERM 155 120859 - 120846 - f 85 -9.5 -3.92542 | opp_overlap 120843, overlap 120843 GCCATGGTGAAATAA CGGCG TATG CGCCG TTATTTTTTTTGAGT LCK_00122 120964 - 121836 + | AraC-type DNA-binding domain-containing protein TERM 156 121878 - 121902 + F 85 -4.4 -5.73563 | gap 1, opp_overlap 121878 AAATTTAAAAGAAAG CGCTTACAATA ATTG TGTTG-AAGCG TTTTTTTAATTTAAT TERM 157 121971 - 121987 + G 70 -8.1 -3.695 | opp_overlap 121971, overlap 121962 121969 CGTTTTTATTCAAAA TATCGAT TTT ATCGATA TCTTTAGTTTTGACG TERM 158 121987 - 121971 - g 77 -8.1 -4.18018 | opp_overlap 121962 121971 121969 CGTTTTTATTCAAAA TATCGAT TTT ATCGATA TCTTTAGTTTTGACG LCK_00123 121934 - 123148 + | major facilitator superfamily permease TERM 159 124116 - 124102 - g 72 -10 -2.59881 | opp_overlap 124102, overlap 124101 TATGTACGCTACAAT GGCATG ACC CATGCC TTTATGGATAAAGTT TERM 160 124102 - 124116 + G 84 -10 -3.92641 | opp_overlap 124102 124101 TATGTACGCTACAAT GGCATG ACC CATGCC TTTATGGATAAAGTT LCK_00124 123145 - 124191 + | lipolytic protein LCK_00125 124203 - 125108 + | transcriptional regulator/sugar kinase LCK_00126 125198 - 126682 + | phospho-beta-galactosidase TERM 161 126782 - 126830 + F 88 -6.1 -5.67283 | TAAAAACGGGCAAAA CCAGATAATGTTGCTATCATCTT TGT GAGGTGATTGTGTCGTTATTTGG TTTTTTGTTTGAGTT TERM 162 127647 - 127627 - g 73 -9.7 -3.12327 | overlap 127625 127630 TCGTTATATTGAACA TGAGACCCA TCG TGGGTCACA GACCAGTGAACGTAT TERM 163 127644 - 127630 - g 73 -10 -2.76964 | overlap 127627 127625 TTATATTGAACATGA GACCCA TCG TGGGTC ACAGACCAGTGAACG bglG 126860 - 127708 + | transcriptional antiterminator TERM 164 127741 - 127775 + F 100 -13.9 -5.86609 | gap 1, opp_overlap 127730 127741 127748 TAAATTTAGGCAAAA CCCAAAAGTTAGTCAC TGAG GTGA-TAACTTTTGGG TTTTTATTTTTTTGA TERM 165 127775 - 127741 - f 100 -13.9 -4.22346 | gap 1, opp_overlap 127741, overlap 127730 127748 TAAATTTAGGCAAAA CCCAAAAGTTAGTCAC TGAG GTGA-TAACTTTTGGG TTTTTATTTTTTTGA TERM 166 128255 - 128269 + G 73 -5.6 -4.64495 | CAAATTTGGTATGCT GCAGGC GAT GCCTTC TTCTTTTTCTTACCT LCK_00128 127805 - 129634 + | phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific TERM 167 129656 - 129668 + F 86 -2.7 -5.87996 | overlap 129649 GTTTGAGATAAAAAA TGATG TGA TATCA TTTTTTTATTAGTTG TERM 168 129688 - 129707 + F 70 -8 -3.28791 | opp_overlap 129688 TTTATTAGTTGTAAA TTATATCG TATG CGATATAA TTATAAACAACACAT TERM 169 129707 - 129688 - f 73 -8 -3.58343 | opp_overlap 129688 TTTATTAGTTGTAAA TTATATCG TATG CGATATAA TTATAAACAACACAT LCK_00129 129739 - 130194 + | transcriptional regulator gshR1 130191 - 131531 + | glutathione reductase LCK_00131 131542 - 132492 + | NADPH:quinone reductase LCK_00132 132494 - 132856 + | hypothetical protein TERM 170 132882 - 132861 - T 90 -8 -5.37593 | opp_overlap 132861 TCTTAAATTAAAAAA GCCCACTC TTAATT GAGTAGGC TTTTTTTAGTTAAGC TERM 171 132861 - 132882 + T 88 -5.8 -5.63103 | opp_overlap 132861 TCTTAAATTAAAAAA GCCCACTC TTAATT GAGTAGGC TTTTTTTAGTTAAGC gtfB 137409 - 132892 - | glucosyltransferase TERM 172 137102 - 137124 + g 74 -4.8 -4.82678 | TCAGCTTGCTTTTGC GTATCAGTCG TTG TGTCTGATGC TTTTACTTTTTCTGC LCK_00134 137686 - 138789 + | GGDEF domain-containing protein TERM 173 138963 - 138952 - f 70 -7.2 -3.83214 | overlap 138953 TTAAAGCAACGTAAA GCGC ATAC GCGC GAAGACAAATAGTAC LCK_00135 139014 - 139703 + | EAL domain-containing protein TERM 174 140022 - 140011 - g 80 -4.4 -5.29445 | opp_overlap 140011 GGTTAAGAACAAAAA CAGT CCCA ACTG TTAGTATCAAAAAAG TERM 175 140489 - 140506 + G 78 -2.6 -5.47218 | overlap 140479 TTTGACTGGTTTAGC CGGTGG TTTTTT CCGTCG TTTTTTTCAGTGGGC LCK_00136 139731 - 141014 + | chloride channel protein EriC TERM 176 141064 - 141108 + F 100 -13.2 -5.73672 | gap 1, opp_overlap 141064 141069 ATACTTATCTTTAAA CGTAA-TAGCAACTAATCTGT GCGC ACAGTTTAGTTGCTAATTGCG TTTTTTTGATTATTT TERM 177 141108 - 141064 - f 89 -11 -3.57971 | gap 1, opp_overlap 141064, overlap 141069 ATACTTATCTTTAAA CGTAA-TAGCAACTAATCTGT GCGC ACAGTTTAGTTGCTAATTGCG TTTTTTTGATTATTT TERM 178 141102 - 141069 - f 95 -14.1 -3.28001 | opp_overlap 141064, overlap 141064 TATCTTTAAACGTAA TAGCAACTAATCTGT GCGC ACAGTTTAGTTGCTA ATTGCGTTTTTTTGA TERM 179 141304 - 141323 + G 74 -9.3 -3.59627 | ATTTCTAGATGGGAA TCCGGTG ATGCCA CACCGGA TTTAACAAATTTAGT LCK_00137 141190 - 141585 + | transcriptional regulator TERM 180 141615 - 141590 - T 100 -9.9 -5.65927 | gap 1, opp_overlap 141590 TATTGAAATAAAAAA GAAGTGATAGTC AAA GACTA-CACTTC TTTTTTATAGGTTTG TERM 181 141590 - 141615 + T 100 -9.9 -5.33866 | gap 1, opp_overlap 141590 TATTGAAATAAAAAA GAAGTGATAGTC AAA GACTA-CACTTC TTTTTTATAGGTTTG LCK_00138 141952 - 141620 - | ring-cleaving dioxygenase TERM 182 142791 - 142781 - g 82 -8.2 -4.65895 | TGGCTCATTTAAAAA GGCG ATG CGCC AAAAAGAGGAGCGCG LCK_00139 142053 - 143609 + | ABC transporter ATPase TERM 183 143800 - 143812 + G 75 -7.7 -4.1196 | TTGGTCCAGTTGGGA GTGGT AAA ACCAC TTTTGCCAATGCATT LCK_00140 143769 - 144248 + | DNA topology modulation protein FLAR-related protein TERM 184 144448 - 144478 + F 77 -3.2 -5.54907 | GAGTTTTTAGTGTAA TCCGTGACTGCT ATCCCCC AGCAGAAGCGGA TTTTTATTTTATGAG alr1 144509 - 145621 + | alanine racemase asd 145656 - 146753 + | aspartate-semialdehyde dehydrogenase TERM 185 146769 - 146783 + F 76 -4.2 -5.098 | AATGATACAATAGCC CTATGG AAG CCATCG TTTATTTTATTTTTA LCK_00143 147149 - 147715 + | hypothetical protein TERM 186 148031 - 148012 - g 88 -8 -5.1675 | TCACGCATTAAAAAA CATCAATT TAAA AATTGATG AAGGTGAGACGGTTG TERM 187 148401 - 148385 - g 70 -8 -3.66908 | overlap 148381 GGTGGTCAAAAGCAA CGTGCA GCAAT TGCACG CTCACTAGCTATGAA TERM 188 148457 - 148442 - g 70 -9 -3.14564 | TTATTGTTTGATGAA CCAACG TCAG CGTTGG ATCCTGAAATGATAG glnQ 147950 - 148687 + | ABC-type polar amino acid transport system, ATPase component glnH 148735 - 149601 + | amino acid ABC transporter periplasmic protein glnM 149601 - 150242 + | ABC-type amino acid transport system, permease component glnP 150252 - 150911 + | ABC-type amino acid transport system, permease component TERM 189 150917 - 150944 + F 90 -10.8 -3.73144 | opp_overlap 150914 150943 GTTAGCATAAAGTGG TATTTAGTCCGT AATA ATGGACTAAATA TTATGTTAATAATCT TERM 190 151836 - 151826 - g 74 -4 -5.04377 | TTAAAACAAAAGAAA TTGA TGT TCAA GTCGTTCAAAAGCCT TERM 191 152583 - 152604 + G 72 -8.7 -3.57144 | opp_overlap 152578 152587, overlap 152587 ACGTGATAAGGACTA CAAAGCCGC TGAA GCCGCTTTG TTTAAGGATAGCAAC oppA 151099 - 152733 + | ABC-type oligopeptide transport system, periplasmic component TERM 192 152768 - 152793 + F 80 -6.3 -4.81852 | TATTGAATGGATAAA TAAGGATTGAC GTCA GTTAATTCTTA TTTTGTTAATTATAG oppB 152820 - 153734 + | ABC-type dipeptide/oligopeptide/nickel transport system, permease component oppC 153746 - 154777 + | ABC-type dipeptide/oligopeptide/nickel transport system, permease component TERM 193 155432 - 155448 + GF 75 -8 -3.76482 | TTCAATTATTTTTAT CACCCA TGATT TGGGTG TTGTTGCTGGTATGG oppD 154746 - 155843 + | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component oppF 155846 - 156781 + | ABC-type oligopeptide transport system, ATPase component TERM 194 157824 - 157837 + G 77 -5.2 -4.8622 | opp_overlap 157833 ACTGAAGCGATGGCT GCGG AAAAAG CCGC TTTTTACTTGGCGGC LCK_00153 156906 - 158798 + | metalloendopeptidase TERM 195 158805 - 158840 + F 87 -12.7 -3.08046 | opp_overlap 158809, overlap 158809 ATTTGGTAATGATAA TAAACGCCTCACAAC AAATAC GCTGTGAGGCGTTTG ATTTTGACATACAAA TERM 196 158836 - 158809 - f 100 -14.2 -4.3953 | opp_overlap 158805 158809 GGTAATGATAATAAA CGCCTCACAACA AATA CGCTGTGAGGCG TTTGATTTTGACATA TERM 197 158809 - 158836 + F 100 -11.3 -4.20806 | opp_overlap 158809, overlap 158805 GGTAATGATAATAAA CGCCTCACAAC AAATAC GCTGTGAGGCG TTTGATTTTGACATA LCK_00154 158924 - 159817 + | permease TERM 198 160063 - 160106 + T 91 -4.8 -5.88565 | gap 1, opp_overlap 160075, overlap 160075 CGAATCCAGCAGGGG CAATCA-AAAAAAGCAGTCAC ATT GTGACTGCTTTTTTCTAACTA TTTTTTTGTTCTGGC TERM 199 160093 - 160075 - T 100 -13.2 -5.63103 | opp_overlap 160063 160075 GGGCAATCAAAAAAA GCAGTCAC ATT GTGACTGC TTTTTTCTAACTATT TERM 200 160075 - 160093 + T 100 -13.2 -5.30686 | opp_overlap 160075, overlap 160063 GGGCAATCAAAAAAA GCAGTCAC ATT GTGACTGC TTTTTTCTAACTATT LCK_00155 161533 - 160100 - | aspartate ammonia-lyase TERM 201 161696 - 161675 - R 89 -7.4 -5.2422 | opp_overlap 161675 161671 AATCATACCAAAAAA GCAATGAA ACATAG TTCATTGC TTCGTATTATTTAAC rpiA1 162386 - 161703 - | ribose 5-phosphate isomerase A TERM 202 162193 - 162211 + g 70 -3 -5.02074 | overlap 162195 162196 ATGGGAATTCCCAGT TGTGCTGC ATT GCGGCGTG TTTTTTCAGAAGTCG LCK_00157 162664 - 162383 - | acetyltransferase LCK_00158 162890 - 163429 + | dUTPase radA 163602 - 164825 + | DNA repair protein RadA TERM 203 165035 - 165023 - f 73 -9.1 -2.78278 | overlap 165022 165020 AGAGTAGATAAATAG CGGGT TTT ACCCG TATAACTGAGGAGGA gltX 165095 - 166591 + | glutamyl-tRNA synthetase TERM 204 166598 - 166627 + F 95 -8.7 -5.00616 | gap 1, opp_overlap 166598 CTGAATTAAATGAGA GCATGGAC-GATGC ATA GCATTAGTTCATGC TTTTTTAGAACAGGA LCK_00161 166727 - 167629 + | NADPH:quinone reductase TERM 205 167631 - 167648 + F 93 -7.7 -5.59357 | opp_overlap 167631 TAACTTTTGATTAAA CACGTGC ATTG GCATGTG TTTTTTTAGTCTGAT TERM 206 167977 - 167961 - g 70 -8.7 -3.4404 | opp_overlap 167966, overlap 167953 AATAAAATTGGACAA CGAAACG GTG CGTTCCG CCGTGTAATCGGACA adhA 167784 - 168839 + | Zn-dependent alcohol dehydrogenase TERM 207 168876 - 168854 - f 89 -8.5 -4.62872 | opp_overlap 168854 AGCAATGTTTAAAAA TTCAGTCCA CTGTT CGGACTGAA TTTTTTTATCATTTG TERM 208 168854 - 168876 + F 93 -7.8 -5.75599 | opp_overlap 168854 AGCAATGTTTAAAAA TTCAGTCC ACTGTTC GGACTGAA TTTTTTTATCATTTG LCK_00163 169000 - 169539 + | hypothetical protein TERM 209 169801 - 169839 + F 100 -11.2 -5.80951 | overlap 169802 GGTACCACGTTTTTA CGTCCCTGTTAGTTAT GCGCTAG ATGACTAACAGGGACC TTTTTTGTTTTCAAT TERM 210 169802 - 169838 + F 100 -14.7 -4.0613 | overlap 169801 GTACCACGTTTTTAC GTCCCTGTTAGTTAT GCGCTAG ATGACTAACAGGGAC CTTTTTTGTTTTCAA LCK_00164 169934 - 170500 + | hypothetical protein LCK_00165 170555 - 172252 + | ABC-type cobalt transport system, ATPase component LCK_00166 172249 - 173073 + | ABC-type cobalt transport system, permease component CbiQ TERM 211 173619 - 173629 + G 73 -5.4 -4.63527 | AAAGATTTTGGTGAG CCAA CAC TTGG TTTTTCACCTGATGG LCK_00167 173094 - 174545 + | acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase LCK_00168 174611 - 174916 + | hypothetical protein TERM 212 175146 - 175158 + G 70 -5.5 -4.34947 | opp_overlap 175145 175146, overlap 175145 CGGATGCAAAGAAAG CGCTT GTA GAGCG TTTTGATGGTATCTT rpsF 175082 - 175378 + | ribosomal protein S6 ssb 175411 - 175956 + | single-stranded DNA binding protein rpsR 175991 - 176275 + | ribosomal protein S18 TERM 213 176299 - 176319 + F 100 -9 -5.88476 | opp_overlap 176299 ATTCTGCTTTAGAAA GCTCAGGT ATTTA ACCTGGGC TTTTTTGTTTATTTT TERM 214 177425 - 177410 - g 89 -10.4 -4.30448 | opp_overlap 177417 AAACCCAATGGAAAA GCGGAC ACGT GTCCGC GCACGTATGATTTCA TERM 215 178204 - 178177 - g 90 -11.5 -4.0162 | TTGTGACAGGAGAAA GTAATCAAACC TATTCG GGTTTGATTAC AGCACAAGCAGCAGA LCK_00172 176424 - 178454 + | signaling protein TERM 216 178619 - 178609 - g 100 -4.6 -5.95286 | ATTAAAAATAAAAAA GCCG AAC CAGC AACAGGTAAAAATTT rplI 178504 - 178956 + | ribosomal protein L9 dnaB 178958 - 180424 + | replicative DNA helicase TERM 217 180428 - 180452 + TF 95 -5.6 -6.25741 | opp_overlap 180429, overlap 180429 CCAGGGTGGTAAAAA AGGACGACCA TATAT TGGCCGTCCC TTTTTTTTATTATTT TERM 218 180451 - 180429 - Tf 100 -11.3 -5.0133 | opp_overlap 180429 180428 CAGGGTGGTAAAAAA GGACGACCA TATAT TGGCCGTCC CTTTTTTTTATTATT TERM 219 180429 - 180451 + TF 93 -9.1 -4.29954 | opp_overlap 180429, overlap 180428 CAGGGTGGTAAAAAA GGACGACCA TATAT TGGCCGTCC CTTTTTTTTATTATT ydbF 180964 - 180467 - | transcriptional regulator LCK_00176 180813 - 181772 + | GntR family transcriptional regulator TERM 220 182318 - 182331 + G 71 -6.7 -4.06904 | TTGGAAGGTATGAGC CGCTT GTTC AAGCG TTTCTCATTCCCTGG TERM 221 182402 - 182376 - g 71 -6.6 -4.0348 | opp_overlap 182378 ACATGACAGCACAAA CACCAGGTTCAT TAC ATGAAGGTGGTG AATTGGGTTATTCAT ptk 181964 - 184417 + | phosphoketolase TERM 222 184470 - 184494 + F 100 -10.8 -6.15259 | opp_overlap 184470 TCATTAAATCATTAA GCGAATCAGA TATAT TCTGGTTCGC TTTTTTTTTAACTTA TERM 223 184494 - 184470 - f 75 -8.6 -3.34227 | opp_overlap 184470 TCATTAAATCATTAA GCGAATCAGA TATAT TCTGGTTCGC TTTTTTTTTAACTTA hisK 184559 - 185377 + | histidinol phosphatase LCK_00179 185374 - 186051 + | HAD superfamily hydrolase LCK_00180 186044 - 186565 + | NTP pyrophosphohydrolase including oxidative damage repair enzymes TERM 224 186584 - 186602 + F 82 -4.6 -5.45802 | opp_overlap 186569 186584 186585 186587, overlap 186578 186585 GTATCATTTTTAAAA TCATACAA CTT TTGTATGC TTTTTATTTTGGAGG TERM 225 186585 - 186601 + F 75 -8.1 -3.86397 | opp_overlap 186569 186585 186584 186587, overlap 186584 186578 TATCATTTTTAAAAT CATACAA CTT TTGTATG CTTTTTATTTTGGAG yweA 186622 - 187854 + | hypothetical protein LCK_00182 188005 - 188820 + | HAD superfamily hydrolase TERM 226 188851 - 188840 - f 76 -4.4 -5.05153 | AGCGTAAAAAATAAA CAAC GGAG GTTG TCAAAATGAACGTTT TERM 227 188915 - 188931 + G 70 -7.9 -3.75153 | AACCGCTAGCAGTCG GAGAGGC ATT GCCTCAC TTTAAGTTAGAAGAC LCK_00183 188857 - 189354 + | peroxiredoxin TERM 228 189430 - 189442 + F 77 -3.4 -5.46657 | GATAGAGACTTTGTG GCTT TTAAC AAGC TTTTTTGTTAAAATG LCK_00184 189499 - 190479 + | phosphoribosylpyrophosphate synthetase TERM 229 190503 - 190517 + F 85 -4.2 -5.60993 | TGTTAATTTTTAAAG GTCGAT TTG GTCGGC TTTTTTTGTGCAAAA rrp1 190604 - 191311 + | response regulator TERM 230 191407 - 191395 - f 74 -9.1 -3.03212 | AATACCAAGGAGACA GACGC CAT GCGTC AGCAACTATGAATAG TERM 231 191489 - 191510 + G 93 -8.7 -5.28176 | GTTGTTAATGATTAT CGCACTCGA ACTT TTGGGTGCG TTTTTTGTACGTCAA hpk1 191415 - 193286 + | Signal transduction histidine kinase LCK_00187 193276 - 194592 + | YycH protein TERM 232 194579 - 194568 - f 76 -4.4 -5.02476 | ATATTTGTCAAAAAA GCAT GTTA ATGC ACAACAAGATTAATA LCK_00188 194605 - 195384 + | hypothetical protein TERM 233 195594 - 195581 - g 71 -3.8 -4.85894 | AAAGTAAATACAAAA GCAG AAAAGA CTGC AGCTATACCAACTAA htrA 195449 - 196588 + | trypsin-like serine protease TERM 234 196602 - 196584 - f 79 -8.9 -3.82067 | opp_overlap 196584 CACAAAAACTTGAAA GCTAACG TTACG CGTTAGC TTTTTCTTTACCTTT TERM 235 196584 - 196602 + F 100 -9.6 -5.34381 | opp_overlap 196584 CACAAAAACTTGAAA GCTAACGT TAC GCGTTAGC TTTTTCTTTACCTTT TERM 236 196827 - 196842 + F 86 -2.6 -5.80364 | gap 1 TGACAATCATGTCTG CCG-ATA GAT TATACGG TTTTTTTGTTAAAGT LCK_00190 197242 - 197721 + | hypothetical protein TERM 237 197736 - 197767 + T 77 -10.4 -2.54096 | opp_overlap 197737 197744, overlap 197744 ATGACCTGAAATAAA ATAAAAAAGCAAAC GTTA GTTTGCTTTTTTAA ATCGTTGTTTTTTGT TERM 238 197766 - 197737 - T 100 -13.9 -4.88918 | opp_overlap 197736 197744, overlap 197744 TGACCTGAAATAAAA TAAAAAAGCAAAC GTTA GTTTGCTTTTTTA AATCGTTGTTTTTTG TERM 239 197744 - 197759 + T 88 -7.6 -5.12617 | opp_overlap 197737 197744, overlap 197736 AAATAAAATAAAAAA GCAAAC GTTA GTTTGC TTTTTTAAATCGTTG TERM 240 197759 - 197744 - T 100 -7.6 -5.95449 | opp_overlap 197744 197736, overlap 197737 AAATAAAATAAAAAA GCAAAC GTTA GTTTGC TTTTTTAAATCGTTG LCK_00191 199161 - 197764 - | major facilitator superfamily permease TERM 241 199223 - 199209 - H 100 -8.6 -6.11392 | opp_overlap 199209 AAATAAACAAAAAAA CCAGTA AAA TACTGG TTTTCAACGGTAAAA TERM 242 199209 - 199223 + H 85 -8.6 -4.09685 | opp_overlap 199209 AAATAAACAAAAAAA CCAGTA AAA TACTGG TTTTCAACGGTAAAA mutY 199516 - 200538 + | A/G-specific adenine glycosylase TERM 243 200786 - 200761 - g 87 -4.8 -5.40072 | gap 1 TTCGTGGCAAAAAAA TACCAC-ACCA ATTAG CGGTAGTGGTA ACATTCATTTTCTTC TERM 244 201171 - 201145 - g 100 -6.6 -5.53991 | overlap 201147 CAGCGATTAAAAAAA TGTTTCCGGCAC GTC ATGCCGAAAAAA TATCAGAATTAATGG LCK_00193 200538 - 201641 + | permease LCK_00194 201690 - 202061 + | hypothetical protein TERM 245 202342 - 202385 + T 89 -13.6 -2.69178 | gap 1, opp_overlap 202354, overlap 202354 GAATCCGCTAGTCGG CATAATCAAAAAGCACTAATC TTA GATTAGTGCTTTTT-ATTTTG TAGTCTAGTGTGCTT TERM 246 202374 - 202354 - T 100 -12.7 -4.93365 | opp_overlap 202342 202354 CGGCATAATCAAAAA GCACTAATC TTA GATTAGTGC TTTTTATTTTGTAGT TERM 247 202354 - 202374 + T 100 -12.7 -5.56263 | opp_overlap 202354, overlap 202342 CGGCATAATCAAAAA GCACTAATC TTA GATTAGTGC TTTTTATTTTGTAGT TERM 248 202468 - 202488 + T 100 -12.7 -5.84381 | opp_overlap 202468 TAACCATTAAAAAAA CCAAACTGT CAT ACAGTTTGG TTTTTTTGTTAATCA TERM 249 202488 - 202468 - T 100 -12.7 -5.58074 | opp_overlap 202468 TAACCATTAAAAAAA CCAAACTGT CAT ACAGTTTGG TTTTTTTGTTAATCA rumA1 203993 - 202497 - | 23S rRNA (uracil-5-)-methyltransferase TERM 250 203885 - 203855 - G 70 -8.3 -3.36273 | gap 1, overlap 203839 TCTGTCCAATACGAA CAGCAACGC-CATC AGTT GAAGCGCGCTGCTG ACCATGTTGTTTACG TERM 251 204219 - 204196 - H 83 -10.2 -3.21194 | CATAAACTTTATCAA CCGCAGTCAC GTTC GTGTCCGCGG ACAAACATTAAGTTG LCK_00196 204244 - 204483 + | hypothetical protein TERM 252 205718 - 205702 - g 79 -10.9 -3.14132 | overlap 205711 GCTGGCGCTGATGAA GCCACAA AGG TTGTGGC AACAACAAATGATGT clpL 204556 - 206676 + | ATPase with chaperone activity, ATP-binding subunit TERM 253 206698 - 206720 + F 100 -13.6 -5.80817 | AAGCAGTATACGTGG CTGATAGACA GTT TGTCTATCAG TTTTTTTGTGTTAAA LCK_00198 206758 - 207780 + | FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) TERM 254 207867 - 207847 - g 90 -12.7 -3.5782 | AATTCAGGAAAGGAA GTGCACATT GTG AATGTGCAC GATAAAAAAATGCCA TERM 255 207989 - 208007 + G 76 -6.8 -4.3534 | overlap 207981 GCCAAGGTGAGTTAC TCATGATT TAT AATCGTGA TTTTGATGGTTGGGC LCK_00199 207820 - 208815 + | NTP pyrophosphohydrolase including oxidative damage repair enzymes TERM 256 208818 - 208847 + T 76 -6.5 -4.57837 | gap 1, opp_overlap 208819, overlap 208819 ATTAACAAAATAAAA AGCAACGTGTGTTT GAT AAGC-CACGTTGCC TTTTTAAGCGCCTGT TERM 257 208846 - 208819 - T 93 -7.8 -5.62288 | gap 1, opp_overlap 208818 208819 TTAACAAAATAAAAA GCAACGTGTGTTT GAT AAGC-CACGTTGC CTTTTTAAGCGCCTG TERM 258 208819 - 208846 + T 81 -10 -3.3422 | gap 1, opp_overlap 208819, overlap 208818 TTAACAAAATAAAAA GCAACGTGTGTTT GAT AAGC-CACGTTGC CTTTTTAAGCGCCTG panE1 209846 - 208851 - | 2-dehydropantoate 2-reductase LCK_00201 210003 - 211019 + | tryptophanyl-tRNA synthetase TERM 259 211044 - 211023 - T 100 -10.2 -4.87291 | opp_overlap 211023 TATTTTAACTAAAAA GCCACTTG ATTTAG CAAGTGGC TTTTTTTTATTGTGT TERM 260 211023 - 211044 + T 100 -10.2 -6.19302 | opp_overlap 211023 TATTTTAACTAAAAA GCCACTTG ATTTAG CAAGTGGC TTTTTTTTATTGTGT LCK_00202 212226 - 211051 - | transcriptional regulator LCK_00203 212605 - 212243 - | hypothetical protein LCK_00204 213444 - 212617 - | permease TERM 261 214033 - 214051 + G 89 -11.8 -3.54743 | AACACGTGTCATTAT CACAACAG TAA CTGTTGTG TTCTGGTTACTGATC LCK_00205 213563 - 214219 + | membrane-associated phospholipid phosphatase TERM 262 214427 - 214451 + F 80 -5 -5.27335 | opp_overlap 214428 214447, overlap 214428 ACAATGACTTTTTAA ACCTCTTTCT ATATA AGAAAGGGGC TTTTTATTTGCCCCG TERM 263 214428 - 214450 + F 79 -8.5 -3.75678 | opp_overlap 214428 214447, overlap 214427 CAATGACTTTTTAAA CCTCTTTCT ATATA AGAAAGGGG CTTTTTATTTGCCCC LCK_00206 214480 - 215919 + | amino acid transporter TERM 264 215930 - 215944 + F 91 -5.7 -5.9003 | opp_overlap 215929 215930 GCTAATGTCTTAAAG CCAGT ATATG ACTGG TTTTTTTATTGCTTT LCK_00207 216077 - 216283 + | hypothetical protein mreB1 216382 - 217374 + | Actin-like ATPase involved in cell morphogenesis LCK_00209 217376 - 217585 + | hypothetical protein TERM 265 217599 - 217625 + F 89 -11.7 -3.36878 | opp_overlap 217599 AAAATAGTTAAAAAA GCCCTTATCAT CTTTT GTGATAAGGGC TTGTACATAGGTGAG TERM 266 217625 - 217599 - f 100 -11 -5.19916 | opp_overlap 217599 AAAATAGTTAAAAAA GCCCTTATCA TCTTTTG TGATAAGGGC TTGTACATAGGTGAG TERM 267 217850 - 217863 + G 93 -6.7 -5.4756 | TTCTGGATTATTGGT GCGAT TATT ATCGC TTTTTTGTTGCGATT LCK_00210 217652 - 218872 + | cell division membrane protein LCK_00211 218872 - 219861 + | ribosomal protein S2 TERM 268 220033 - 220043 + G 70 -3.2 -4.87626 | overlap 220026 AGCGACAGGCAAATA TCGT ATA ACGG TTTTTGCTATTGCCC ddl 219923 - 221056 + | D-alanine--D-alanine ligase TERM 269 221113 - 221099 - g 75 -10 -3.18274 | TTGATGGTAAGGCAA TTCGCG CGG CGCGAA AGAAAATGCATTTAT TERM 270 221304 - 221287 - g 72 -3.4 -5.0916 | TTTTTAACACAAAAA GCCAAA GAATTA CTTGGC AAAGTTGTGTTAGAA TERM 271 221451 - 221437 - g 89 -4.3 -5.55769 | TGTCACAATAAAAAA GACTT TGCTG AAGTC GTACACTATGCTGAC LCK_00213 221056 - 221922 + | TPR repeat-containing protein TERM 272 221912 - 221963 + T 100 -24.4 -3.16742 | gap 1, opp_overlap 221912 221916 221928, overlap 221916 221928 CTCAGTTGGATACAA TTAAGTTCT-AAAAAAAGGTCTCAC ATT GTGAGACCTTTTTTTTAGAACTTAA TTAATCAAAATTAAC TERM 273 221963 - 221912 - T 100 -24.4 -3.49475 | gap 1, opp_overlap 221912 221916 221928, overlap 221916 221928 CTCAGTTGGATACAA TTAAGTTCT-AAAAAAAGGTCTCAC ATT GTGAGACCTTTTTTTTAGAACTTAA TTAATCAAAATTAAC TERM 274 221916 - 221959 + T 100 -20.8 -3.40073 | gap 1, opp_overlap 221912 221916 221928, overlap 221912 221928 GTTGGATACAATTAA GTTCT-AAAAAAAGGTCTCAC ATT GTGAGACCTTTTTTTTAGAAC TTAATTAATCAAAAT TERM 275 221959 - 221916 - T 100 -20.8 -3.49618 | gap 1, opp_overlap 221916 221912 221928, overlap 221912 221928 GTTGGATACAATTAA GTTCT-AAAAAAAGGTCTCAC ATT GTGAGACCTTTTTTTTAGAAC TTAATTAATCAAAAT TERM 276 221946 - 221928 - T 100 -13.2 -5.43866 | opp_overlap 221916 221912 221928, overlap 221916 221912 TAAGTTCTAAAAAAA GGTCTCAC ATT GTGAGACC TTTTTTTTAGAACTT TERM 277 221928 - 221946 + T 100 -13.2 -5.77853 | opp_overlap 221928 221916 221912, overlap 221916 221912 TAAGTTCTAAAAAAA GGTCTCAC ATT GTGAGACC TTTTTTTTAGAACTT usp1 222417 - 221974 - | universal stress protein UspA TERM 278 222535 - 222515 - R 100 -11.9 -5.40474 | ATTCTTTCAAAAAAA GCGCTCACA TGA TGTGAACGC ACGGGTTAAACCCGG TERM 279 222549 - 222537 - R 72 -9.1 -2.54193 | CATGATGTGAACGCA CGGGT TAA ACCCG GAATACTCTTGATAC LCK_00215 224092 - 222800 - | ATPase TERM 280 223906 - 223929 + g 71 -3.8 -4.89233 | overlap 223909 223912 CATATTTAGATGAAC CGGCGATTGC TGAA GCAATTGATG TTTTTCCTGTTCCTG LCK_00216 224543 - 224172 - | hypothetical protein TERM 281 224637 - 224620 - R 100 -9.1 -5.67711 | opp_overlap 224620 CAAACAAAAGAAAAA CGCCACC CAAA GGTGACG TTTCAACCAGAATCA rpsD 225275 - 224664 - | ribosomal protein S4 TERM 282 226505 - 226493 - g 73 -7.7 -3.85909 | TGATGGAAACTGAAA TGACG GCG CGTCA GCAAGTAACTAAACA ezrA 225589 - 227301 + | negative regulator of septation ring formation TERM 283 227317 - 227366 + T 100 -15.3 -3.27544 | opp_overlap 227321 227323 227329, overlap 227321 227329 ATAAACTGAGTTTGA TATATATTAAAAGGCCACCCGAT TTAA GTCAGGTGGCCTTTTAATATGCA TTCATGATAGTTTTG TERM 284 227362 - 227321 - T 100 -19.8 -2.88663 | opp_overlap 227317 227321 227329, overlap 227323 227329 ACTGAGTTTGATATA TATTAAAAGGCCACCCGA TTTAAG TCAGGTGGCCTTTTAATA TGCATTCATGATAGT TERM 285 227321 - 227362 + T 100 -18.3 -2.57974 | opp_overlap 227321 227323 227329, overlap 227317 227329 ACTGAGTTTGATATA TATTAAAAGGCCACCCGAT TTAA GTCAGGTGGCCTTTTAATA TGCATTCATGATAGT TERM 286 227360 - 227323 - T 100 -18 -2.99471 | opp_overlap 227321 227317 227329, overlap 227321 227329 TGAGTTTGATATATA TTAAAAGGCCACCCGA TTTAAG TCAGGTGGCCTTTTAA TATGCATTCATGATA TERM 287 227354 - 227329 - T 100 -12.6 -4.41353 | opp_overlap 227329 227321 227317, overlap 227323 227321 TGATATATATTAAAA GGCCACCCGA TTTAAG TCAGGTGGCC TTTTAATATGCATTC TERM 288 227329 - 227354 + T 100 -11.1 -4.36931 | opp_overlap 227323 227321 227329, overlap 227321 227317 TGATATATATTAAAA GGCCACCCGAT TTAA GTCAGGTGGCC TTTTAATATGCATTC LCK_00219 228768 - 227368 - | amino acid transporter TERM 289 228915 - 228895 - g 73 -7.7 -3.88731 | TAAGATTATATGAAA GATAACAAA GTA TTTGTCATC ACTGGTGCGACAGGT gmk1 228889 - 229479 + | guanylate kinase TERM 290 229734 - 229707 - f 90 -11.3 -3.53091 | opp_overlap 229707 ATTGGCTGGTGTAAA CGCACATTCGG AATCGA CCGAGTGTGCG TTTTTGTTAGAAATC TERM 291 229707 - 229734 + F 100 -13.5 -5.07486 | opp_overlap 229707 ATTGGCTGGTGTAAA CGCACATTCGG AATCGA CCGAGTGTGCG TTTTTGTTAGAAATC TERM 292 230698 - 230688 - g 85 -5.4 -5.24989 | TTAGATATGAAAAAA GCTT ACC AAGC ACGACGAGATTTTGT LCK_00221 229788 - 230972 + | aspartate/tyrosine/aromatic aminotransferase LCK_00222 230977 - 231969 + | lactate dehydrogenase pfoR 232032 - 233081 + | membrane protein, putative toxin regulator TERM 293 233126 - 233114 - f 71 -7.7 -3.55857 | overlap 233112 ATCAAAATAAAGACA TGCCT CAC AGGCA GAAAGCGAACGAGGC TERM 294 235162 - 235143 - f 72 -9.2 -2.65808 | opp_overlap 235146 235149, overlap 235140 235155 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 295 235334 - 235318 - f 81 -10.9 -2.62616 | TCAGCTGGGAGAGCA CCTGCTT TGC AAGCAGG GGGTCAGCGGTTCGA TERM 296 235493 - 235478 - f 77 -6.2 -4.65219 | opp_overlap 235477 ACAACACAAAAAGAA GTTCTT TAAA AAGAAC GGTTTAATCGCAGGT TERM 297 239341 - 239365 + F 100 -15.9 -4.28774 | opp_overlap 239341 ACGGCATGACTAAAA GGGTAACATCA ACT TGATGTTACCC TTTTACATTGACTGG TERM 298 239365 - 239341 - f 100 -15.9 -4.30844 | opp_overlap 239341 ACGGCATGACTAAAA GGGTAACATCA ACT TGATGTTACCC TTTTACATTGACTGG LCK_00224 239541 - 239948 + | phosphopantetheinyl transferase (holo-ACP synthase) alr2 239951 - 241081 + | alanine racemase TERM 299 241429 - 241412 - g 76 -7 -4.36914 | opp_overlap 241414 GGTTGCGTGACAAAA TAGCGC ATATTA GCGCTA ATTCACAAGAGATGC LCK_00226 241123 - 241488 + | growth inhibitor LCK_00227 241517 - 242527 + | putative acetyl transferase TERM 300 242537 - 242563 + F 79 -9.6 -3.17075 | AAATAATGTATATTT CATGAGTTCA CGCTATA TGAACTCATG TTAACTTGACGGACA TERM 301 242763 - 242787 + F 95 -8.7 -5.30155 | opp_overlap 242763 GTACCACGGTGAAAA TCGTCCTAA TTGTGTT TTAGGACGA TTTTTTAATTGGTGC TERM 302 242787 - 242763 - f 85 -8.7 -4.12188 | opp_overlap 242763 GTACCACGGTGAAAA TCGTCCTAA TTGTGTT TTAGGACGA TTTTTTAATTGGTGC valS 242827 - 245511 + | valyl-tRNA synthetase TERM 303 245520 - 245546 + F 100 -11.7 -4.53036 | opp_overlap 245520 245519 245523 GCAATGAGGTATAAG GAATCAGTTCG AATCA CGAGCTGATTC TTTTCCTGTTTATAG TERM 304 245546 - 245520 - f 72 -9.5 -2.63435 | opp_overlap 245520, overlap 245519 245523 GCAATGAGGTATAAG GAATCAGTTCG AATCA CGAGCTGATTC TTTTCCTGTTTATAG LCK_00229 245604 - 246281 + | hypothetical protein fabH1 246381 - 247355 + | 3-oxoacyl-[acyl-carrier-protein] synthase TERM 305 247696 - 247714 + G 71 -6 -4.1711 | opp_overlap 247695 247696 AACATTATTAGCAAC TGCTGC TGGTGTT GCAGCA TTTGTTGGCGGTCAT TERM 306 247862 - 247834 - g 79 -9.7 -3.68222 | opp_overlap 247840, overlap 247837 GGCTAAGGCCAACAA CATCAATGACAAG AAT CTTATCATTGCTG GGCAACAACTAACTG TERM 307 247859 - 247837 - g 72 -10 -2.64759 | opp_overlap 247840, overlap 247834 TAAGGCCAACAACAT CAATGACAAG AAT CTTATCATTG CTGGGCAACAACTAA LCK_00231 247661 - 248821 + | LysM repeat-containing protein TERM 308 248869 - 248903 + G 82 -8.6 -4.30933 | opp_overlap 248869 TAGATGTTGCATTAA CGCAGTTGGGGAAG ACGTATC CTTCCTCAGGTGCG TTTGTTGCGTTTGTC LCK_00232 248838 - 249188 + | cell wall-associated hydrolase (invasion-associated proteins) TERM 309 249257 - 249231 - f 75 -8.2 -3.86346 | opp_overlap 249231 249236, overlap 249236 CTATTTTGTCACAAA GATAACCAAAAA GAC TTTTTAGTTACC TGATTGTGTTTTTGA LCK_00233 249399 - 250445 + | LysM repeat-containing protein TERM 310 250465 - 250477 + F 100 -6.9 -6.14618 | opp_overlap 250465 AAAATTTCATTAAAA CGTCC ACA GGGCG TTTTTTTATTTTATA LCK_00234 250519 - 251772 + | FemAB family protein LCK_00235 251858 - 253039 + | transcriptional regulator TERM 311 253084 - 253043 - f 100 -23.5 -4.50058 | opp_overlap 253046 253054, overlap 253054 GATCCACAATGAAAA TAATGTAAAAAGTCGACTG AAAA CAGTCGACTTTTTACATTA TCTAGATATAATCCT TERM 312 253046 - 253081 + F 100 -20.8 -3.5399 | opp_overlap 253043 253054, overlap 253054 CCACAATGAAAATAA TGTAAAAAGTCGACTG AAAA CAGTCGACTTTTTACA TTATCTAGATATAAT TERM 313 253073 - 253054 - f 100 -12.2 -4.85195 | opp_overlap 253046 253054, overlap 253043 AAAATAATGTAAAAA GTCGACTG AAAA CAGTCGAC TTTTTACATTATCTA TERM 314 253054 - 253073 + F 100 -12.2 -4.79756 | opp_overlap 253054 253043, overlap 253046 AAAATAATGTAAAAA GTCGACTG AAAA CAGTCGAC TTTTTACATTATCTA LCK_00236 253161 - 254156 + | membrane-associated phospholipid phosphatase TERM 315 254322 - 254301 - f 100 -10.1 -5.47821 | opp_overlap 254301 AGGCATTGAAAAAAA CTGGCAGAC ATCT GACTGCCAG TTTTTTTATATATTA TERM 316 254301 - 254322 + F 100 -10.1 -5.80248 | opp_overlap 254301 AGGCATTGAAAAAAA CTGGCAGAC ATCT GACTGCCAG TTTTTTTATATATTA ppx1 254422 - 255342 + | exopolyphosphatase TERM 317 255358 - 255381 + G 83 -9.6 -3.84451 | opp_overlap 255357 255360 AAAATATTATGAATT GACGCCAGAT GAAC GTTTGGCGTC TTTACATTTAGACCA mvaA 255335 - 256549 + | hydroxymethylglutaryl-CoA reductase, degradative LCK_00239 256546 - 257490 + | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component TERM 318 258005 - 258032 + G 89 -12 -3.51694 | opp_overlap 258005, overlap 258001 TTTTGAAGTGGAAAA GTCTGCTGCGTG GGTC CAAGCAGCGGAC TTGATTGTCATTGTT TERM 319 258032 - 258005 - g 89 -9.8 -4.19238 | opp_overlap 258001 258005 TTTTGAAGTGGAAAA GTCTGCTGCGTG GGTC CAAGCAGCGGAC TTGATTGTCATTGTT LCK_00240 257490 - 258206 + | Sir2 family NAD-dependent protein deacetylase LCK_00241 258279 - 259184 + | Co/Zn/Cd efflux system component TERM 320 260270 - 260284 + G 71 -7.2 -3.86372 | ATCATTGGTGCAACT GTTATG CCA CATAAC TTATATTTGCATTCA LCK_00242 259550 - 260941 + | manganese transporter NRAMP usp2 260966 - 261427 + | universal stress protein UspA TERM 321 261435 - 261458 + F 84 -6.7 -5.055 | opp_overlap 261435 GTAAGTAATCAAAAA GACACTGCC ATAATA GACAGTGTC TTTTTTGAAAATTAG TERM 322 261458 - 261435 - f 95 -8.9 -4.93547 | opp_overlap 261435 GTAAGTAATCAAAAA GACACTGCC ATAATA GACAGTGTC TTTTTTGAAAATTAG TERM 323 261489 - 261522 + F 100 -9.6 -5.00884 | opp_overlap 261492, overlap 261491 261492 CTTTTGTATAACACG AAACCCCGATAAGC TAACGC GCTTATCGGGGCTA TTTTTTGGGAGAGAT TERM 324 261491 - 261520 + F 100 -12.2 -4.13561 | opp_overlap 261492, overlap 261489 261492 TTTGTATAACACGAA ACCCCGATAAGC TAACGC GCTTATCGGGGC TATTTTTTGGGAGAG TERM 325 261519 - 261492 - f 100 -15.7 -3.97088 | opp_overlap 261492 261491 261489 TTGTATAACACGAAA CCCCGATAAGC TAACGC GCTTATCGGGG CTATTTTTTGGGAGA TERM 326 261492 - 261519 + F 100 -15.7 -3.07655 | opp_overlap 261492, overlap 261491 261489 TTGTATAACACGAAA CCCCGATAAGC TAACGC GCTTATCGGGG CTATTTTTTGGGAGA TERM 327 262322 - 262334 + G 77 -7.7 -4.25283 | TTAAGCCAGTTCATA CGTTC TTC GAACG TTTTGGTGACAAAAT cadD 261820 - 262431 + | permease, cadmium resistance protein TERM 328 262483 - 262473 - g 70 -2.6 -5.09426 | GTGAACTTGAAAAAA TATT TAA AATA TTAGGGAATAAACAA LCK_00245 262439 - 262741 + | transcriptional regulator TERM 329 262926 - 262947 + T 100 -10.3 -5.243 | opp_overlap 262926 TCATTGATTTAAAAA GACATTAAG TTAA CTTAATGTC TTTTTTAGTGATTTA TERM 330 262947 - 262926 - T 100 -10.3 -4.67353 | opp_overlap 262926 TCATTGATTTAAAAA GACATTAAG TTAA CTTAATGTC TTTTTTAGTGATTTA LCK_00246 264166 - 263006 - | ATP-dependent exoDNAse beta subunit gspA 264268 - 265119 + | lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase TERM 331 265175 - 265134 - f 84 -11.9 -2.70215 | opp_overlap 265147, overlap 265147 AAACGGGCAGAGAAG GGAAATAAAAAAAGCTGCT ATCC AGCAGCTTTTTTTATTTAG ACCAGCCATGCGATT TERM 332 265147 - 265162 + F 100 -9 -5.95539 | opp_overlap 265134 265147 AGGGAAATAAAAAAA GCTGCT ATCC AGCAGC TTTTTTTATTTAGAC TERM 333 265162 - 265147 - f 100 -9 -5.96894 | opp_overlap 265147, overlap 265134 AGGGAAATAAAAAAA GCTGCT ATCC AGCAGC TTTTTTTATTTAGAC LCK_00248 265875 - 266828 + | inosine-uridine nucleoside N-ribohydrolase gidB 266904 - 267623 + | methyltransferase GidB LCK_00250 267678 - 268439 + | ParaA family ATPase LCK_00251 268429 - 269331 + | transcriptional regulator TERM 334 269396 - 269383 - g 93 -6.7 -5.37593 | GTGGAAATGAAAAAA CCACA CGCT TGTGG GACCAATTCGTGGCG LCK_00252 269332 - 269535 + | hypothetical protein LCK_00253 269611 - 270711 + | GTPase, translation factor TERM 335 270732 - 270719 - f 84 -6.7 -5.08255 | ACGTCTAAAAGAAAA CAACC TGCG GGTTG CGTACATAGTCTCGG LCK_00254 270760 - 271464 + | integral membrane protein rrp2 271477 - 272166 + | response regulator TERM 336 272217 - 272244 + G 90 -9.2 -4.93547 | opp_overlap 272227 ACCAAAATATATTAT GCGGTAGGAACA GTAT TGTTACTACTGC TTTTTAGTTGGTTCG hpk2 272166 - 273275 + | Signal transduction histidine kinase vanY 273262 - 274539 + | D-alanyl-D-alanine carboxypeptidase TERM 337 274549 - 274581 + F 100 -12.3 -5.56673 | opp_overlap 274549 GGGTAATTATAAGCA GGACAAGTTGTTATT TAA AATAATAATTTGTCC TTTTTTATTGTACCT TERM 338 274987 - 274965 - g 73 -5.4 -4.62069 | overlap 274966 CCCTGATGGCAAAAA TCCTGACCGC CAA GCGGCCACGT CACAATATGACAGAA TERM 339 274986 - 274966 - g 72 -8.9 -3.3692 | overlap 274965 CCTGATGGCAAAAAT CCTGACCGC CAA GCGGCCACG TCACAATATGACAGA nagB 274669 - 275370 + | glucosamine-6-phosphate isomerase TERM 340 276357 - 276346 - g 75 -5.8 -4.78661 | opp_overlap 276345 276346 AGGTAAAAATCAAAA GGGT ATTT ACCC ATCTTCTGCGAACTT TERM 341 276566 - 276548 - g 73 -7.4 -4.01603 | opp_overlap 276558, overlap 276558 GAGGTAAATACTAAA GCGTCACA AGG TGTTACGC TAGCACATGTTGATG pgi 275456 - 276808 + | glucose-6-phosphate isomerase TERM 342 276878 - 276833 - f 100 -23.7 -3.30039 | opp_overlap 276838, overlap 276838 TATTTAGAATCAACA TAAAAGTTGGTCAGCGTAACA TTTT TGTTACGCTGACCAACTTTTT TAGTACCTTAAATAA TERM 343 276873 - 276838 - f 100 -23.6 -4.74767 | opp_overlap 276838, overlap 276833 AGAATCAACATAAAA GTTGGTCAGCGTAACA TTTT TGTTACGCTGACCAAC TTTTTTAGTACCTTA TERM 344 276838 - 276873 + F 100 -23.6 -5.18357 | opp_overlap 276838 276833 AGAATCAACATAAAA GTTGGTCAGCGTAACA TTTT TGTTACGCTGACCAAC TTTTTTAGTACCTTA LCK_00260 276987 - 277943 + | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB LCK_00261 277921 - 278937 + | Type II secretory pathway, component PulF LCK_00262 278934 - 279257 + | competence protein ComGC LCK_00263 279241 - 279636 + | Type II secretory pathway, pseudopilin PulG LCK_00264 279620 - 279823 + | hypothetical protein LCK_00265 279756 - 280232 + | hypothetical protein LCK_00266 280229 - 280525 + | hypothetical protein LCK_00267 280557 - 281567 + | adenine-specific DNA methylase TERM 345 282474 - 282497 + G 74 -6 -4.46073 | overlap 282441 CAATGGCTACGCGAT CTGGAGATGT TGAT ACATCACTAG TTTATTATATTCAAG ackA1 281591 - 282937 + | acetate kinase TERM 346 282985 - 283011 + F 71 -6.6 -4.12267 | opp_overlap 282984 282985, overlap 282986 CTAAAATATAACAAG TCGACTAGTATT AAT GATACTGGTCGC TTTCATTATTATGAT TERM 347 282986 - 283010 + F 77 -10.1 -3.06276 | opp_overlap 282984 282985, overlap 282985 TAAAATATAACAAGT CGACTAGTATT AAT GATACTGGTCG CTTTCATTATTATGA TERM 348 283200 - 283220 + G 71 -6.9 -4.03219 | overlap 283203 AAAAGTCTAAATGGC TAACGGC ATTTTTG GCCGTTA TTGTTGTTGTGGGCT LCK_00269 283049 - 284371 + | periplasmic solute-binding protein TERM 349 284416 - 284373 - f 100 -14.1 -4.61852 | opp_overlap 284378, overlap 284378 AATATGATAAATAAA TAAAATAGGCTGATGAGTG AAGTCA CACTCGTCAGCCTATTTTT AATAGATCATCATGA TERM 350 284411 - 284378 - f 100 -14 -5.22481 | opp_overlap 284378, overlap 284373 GATAAATAAATAAAA TAGGCTGATGAGTG AAGTCA CACTCGTCAGCCTA TTTTTAATAGATCAT TERM 351 284378 - 284411 + F 100 -16.2 -4.75372 | opp_overlap 284373 284378 GATAAATAAATAAAA TAGGCTGATGAGTG AAGTCA CACTCGTCAGCCTA TTTTTAATAGATCAT TERM 352 284582 - 284535 - f 71 -8.8 -3.05496 | gap 1, opp_overlap 284535, overlap 284532 284541 TTACAAGAATAATGA TGAAAACGTTTACAAAATTTCCT AAA AAGAC-TTGTGTAAACGTTTTCA TTCGTGTAAAATAGT LCK_00270 284636 - 285592 + | putative glucose uptake permease TERM 353 285597 - 285637 + T 100 -24.5 -4.28049 | opp_overlap 285597 285607, overlap 285607 AGTTTGCATAAAGAA GTAATAAAAAGGACTTGCT ATT AGCAAGTCCTTTTTATTAC TTTTCAACTTTTAGA TERM 354 285637 - 285597 - T 100 -24.5 -4.06687 | opp_overlap 285597 285607, overlap 285607 AGTTTGCATAAAGAA GTAATAAAAAGGACTTGCT ATT AGCAAGTCCTTTTTATTAC TTTTCAACTTTTAGA TERM 355 285607 - 285627 + T 100 -14.1 -5.28166 | opp_overlap 285597 285607, overlap 285597 AAGAAGTAATAAAAA GGACTTGCT ATT AGCAAGTCC TTTTTATTACTTTTC TERM 356 285627 - 285607 - T 100 -14.1 -5.23396 | opp_overlap 285607 285597, overlap 285597 AAGAAGTAATAAAAA GGACTTGCT ATT AGCAAGTCC TTTTTATTACTTTTC greA 286116 - 285634 - | transcription elongation factor LCK_00272 288782 - 286173 - | hypothetical protein pbp2B 288878 - 290926 + | cell division protein FtsI/penicillin-binding protein TERM 357 290929 - 290964 + T 100 -22.2 -4.87892 | opp_overlap 290929 290935 AAAACCAAAGTAAAA TTAAAACACGAGCCAC CTTA GTGGCTCGTGTTTTAA TTTGTTTTATTAGAA TERM 358 290964 - 290929 - T 100 -22.2 -4.65819 | opp_overlap 290929, overlap 290935 AAAACCAAAGTAAAA TTAAAACACGAGCCAC CTTA GTGGCTCGTGTTTTAA TTTGTTTTATTAGAA TERM 359 290958 - 290935 - T 100 -16.8 -4.74084 | opp_overlap 290929, overlap 290929 AAAGTAAAATTAAAA CACGAGCCAC CTTA GTGGCTCGTG TTTTAATTTGTTTTA LCK_00274 291578 - 290961 - | nucleoside-diphosphate-sugar epimerase LCK_00275 291643 - 292800 + | MoxR-like ATPase LCK_00276 292797 - 293966 + | metal-dependent peptidase TERM 360 294211 - 294221 + G 79 -5.4 -4.84146 | TGACAACTTTTTCTG GTGT ACA ACAC TTTATTTTATCTCAT LCK_00277 293994 - 294290 + | hypothetical protein LCK_00278 294287 - 294790 + | hypothetical protein TERM 361 294964 - 294998 + F 100 -13 -4.90869 | CACGTTTTTTTGGTA GCCGTTACTTATTTCC AGC GTAAATAAGTGGCGGC TTTTTGATTGCTCAT LCK_00279 295048 - 295572 + | hypothetical protein TERM 362 296241 - 296258 + G 77 -8.5 -3.79251 | opp_overlap 296233 296241 296237 296245 296248 296250, overlap 296248 296250 ACAGCAAGCCACCAA GTAACCA CACC TGGTTAC TTTGCTAATCAGGTG thiM 295569 - 296348 + | hydroxyethylthiazole kinase TERM 363 296710 - 296731 + G 70 -9.5 -2.67803 | overlap 296707 296706 296714 ACTGATGAGGCTGTT TCAGCAGTG AAAA CACTGTTGA TGCCTTTGGTAACAC thiD 296341 - 297171 + | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase thiE 297161 - 297799 + | thiamine monophosphate synthase LCK_00283 297853 - 298689 + | hypothetical protein TERM 364 298731 - 298681 - T 100 -15.8 -5.07486 | opp_overlap 298681 298685 298697, overlap 298687 298697 CAGTTGGAAGAAAAA TATAAATAAACAAAAAGCCAAGCA TTG TGCTTGGCTTTTTGTTTAAATAAA TTGTTCCGACAATCT TERM 365 298681 - 298731 + T 100 -15.8 -3.62224 | opp_overlap 298681 298687 298697, overlap 298685 298697 CAGTTGGAAGAAAAA TATAAATAAACAAAAAGCCAAGCA TTG TGCTTGGCTTTTTGTTTAAATAAA TTGTTCCGACAATCT TERM 366 298685 - 298727 + T 100 -16.6 -2.6563 | opp_overlap 298681 298687 298697, overlap 298681 298697 TGGAAGAAAAATATA AATAAACAAAAAGCCAAGCA TTG TGCTTGGCTTTTTGTTTAAA TAAATTGTTCCGACA TERM 367 298725 - 298687 - T 100 -23.6 -4.64423 | opp_overlap 298685 298681 298697, overlap 298681 298697 GAAGAAAAATATAAA TAAACAAAAAGCCAAGCA TTG TGCTTGGCTTTTTGTTTA AATAAATTGTTCCGA TERM 368 298715 - 298697 - T 100 -13.2 -5.56573 | opp_overlap 298685 298681 298697, overlap 298687 298681 ATAAATAAACAAAAA GCCAAGCA TTG TGCTTGGC TTTTTGTTTAAATAA TERM 369 298697 - 298715 + T 100 -13.2 -5.30616 | opp_overlap 298697 298687 298681, overlap 298685 298681 ATAAATAAACAAAAA GCCAAGCA TTG TGCTTGGC TTTTTGTTTAAATAA pepF1 300522 - 298723 - | oligoendopeptidase F TERM 370 299229 - 299279 + g 77 -9.8 -3.54459 | opp_overlap 299260 299264 299269, overlap 299231 299272 CGGCATCAGAAGTTG CTGCCTTAACATTTGCATCGTTAA CAA TTAACTCAGCGAATGTTGAGGCTG TTTCAGCCACATTCA TERM 371 299231 - 299277 + g 80 -11 -3.34894 | opp_overlap 299260 299264 299269, overlap 299229 299272 GCATCAGAAGTTGCT GCCTTAACATTTGCATCGTTAA CAA TTAACTCAGCGAATGTTGAGGC TGTTTCAGCCACATT TERM 372 300971 - 300957 - g 71 -4.2 -4.95211 | overlap 300959 AAAAAACCAACAAAA CAGCGA TAC TCGCTC ACGGTTGGCACAATA TERM 373 300969 - 300959 - g 71 -6.8 -4.04459 | overlap 300957 AAAACCAACAAAACA GCGA TAC TCGC TCACGGTTGGCACAA LCK_00285 300692 - 301621 + | alpha/beta fold family hydrolase TERM 374 301653 - 301626 - f 95 -8.7 -5.03715 | opp_overlap 301626 301632, overlap 301632 ATGATCGCTAAAAAA TAAAAACATGA GTCGCA TCATGTTTTTA TTTTTTTATACCTGT TERM 375 301626 - 301653 + F 95 -8.7 -5.65177 | opp_overlap 301626 301632, overlap 301632 ATGATCGCTAAAAAA TAAAAACATGA GTCGCA TCATGTTTTTA TTTTTTTATACCTGT TERM 376 301632 - 301647 + F 89 -3.3 -5.89659 | opp_overlap 301626 301632, overlap 301626 GCTAAAAAATAAAAA CATGA GTCGCA TCATG TTTTTATTTTTTTAT TERM 377 301647 - 301632 - f 82 -3.3 -5.75538 | opp_overlap 301632 301626, overlap 301626 GCTAAAAAATAAAAA CATGA GTCGCA TCATG TTTTTATTTTTTTAT proB 301785 - 302600 + | gamma-glutamyl kinase TERM 378 303377 - 303355 - g 70 -2.7 -5.10064 | overlap 303356 GCTAAGACACAAAAA CCTGCTG TCTGTAATG CAGCAGA AAAGTTATTGGTTCA LCK_00287 302602 - 303849 + | gamma-glutamyl phosphate reductase TERM 379 303896 - 303839 - T 100 -14.6 -3.66178 | opp_overlap 303854, overlap 303820 303841 303854 TTGGTCAAGGCCAAA TACGTGAATAAAAAAGTGTTGCAACG TTATCG CGTTGCAACACTTTTTTATTAAGCTA GAACAGTCAGCATCA TERM 380 303893 - 303841 - T 100 -16.1 -3.41222 | gap 1, opp_overlap 303854, overlap 303839 303854 GGTCAAGGCCAAATA CGTGAATAAAAAAGTGTTGCAACG TTATCG CGTTGCAACACTTTTTTATTAA-G CTAGAACAGTCAGCA TERM 381 303881 - 303854 - T 100 -14.3 -5.46657 | opp_overlap 303854, overlap 303841 303839 TACGTGAATAAAAAA GTGTTGCAACG TTATCG CGTTGCAACAC TTTTTTATTAAGCTA TERM 382 303854 - 303881 + T 100 -15 -5.46657 | opp_overlap 303854 303841 303839 TACGTGAATAAAAAA GTGTTGCAACGT TATC GCGTTGCAACAC TTTTTTATTAAGCTA LCK_00288 304881 - 303889 - | inosine-uridine nucleoside N-ribohydrolase TERM 383 304997 - 305010 + G 73 -6.7 -4.1711 | opp_overlap 304988 TTGAAAGGACGGTTG CCCAA AAAA TTGGG TTTATTGAAGGTAAT trxB1 304963 - 306045 + | thioredoxin reductase TERM 384 306089 - 306066 - T 90 -8.2 -5.06451 | opp_overlap 306066 GATTATGCTAAAAAA GCCAATCG TCTTGATT CGATTGGC TTTTTATTTTGCACT TERM 385 306066 - 306089 + T 93 -8.2 -5.46706 | opp_overlap 306066 GATTATGCTAAAAAA GCCAATCG TCTTGATT CGATTGGC TTTTTATTTTGCACT LCK_00290 306974 - 306093 - | dTDP-D-glucose 4,6-dehydratase LCK_00291 307778 - 307041 - | amino acid ABC transporter ATP-binding protein TERM 386 307429 - 307441 + g 81 -2.7 -5.58209 | GCTGTTAAATTGGCA TGTTT GAT AGACA TTTTTTTGACTTTAA LCK_00292 308473 - 307775 - | amino acid ABC transporter permease LCK_00293 309327 - 308533 - | amino acid ABC transporter substrate-binding protein TERM 387 309353 - 309381 + r 95 -14.7 -2.57423 | opp_overlap 309353, overlap 309349 CTGTGCAAACAAAAA GCGCCAACTAG TTAATTT CTAGTTGGCGC TGAGTTAGTCCGTAT TERM 388 309381 - 309353 - R 100 -14.7 -5.27335 | opp_overlap 309353 309349 CTGTGCAAACAAAAA GCGCCAACTAG TTAATTT CTAGTTGGCGC TGAGTTAGTCCGTAT LCK_00294 310197 - 309541 - | HD superfamily hydrolase metS 310416 - 312533 + | methionyl-tRNA synthetase TERM 389 312579 - 312534 - f 81 -9.3 -3.73068 | opp_overlap 312539, overlap 312539 TCTGGAATTGAATAA TAGCATTTATGCCAAGATG TTTTGACG CATCTTGGCATAAATTTTA TGCTGAGTAGCAAAT TERM 390 312539 - 312574 + F 100 -14.3 -4.4767 | opp_overlap 312534 312539 AATTGAATAATAGCA TTTATGCCAAGATGT TTTGAC GCATCTTGGCATAAA TTTTATGCTGAGTAG TERM 391 312574 - 312539 - f 89 -13.6 -2.86661 | opp_overlap 312539, overlap 312534 AATTGAATAATAGCA TTTATGCCAAGATG TTTTGACG CATCTTGGCATAAA TTTTATGCTGAGTAG birA 312605 - 313585 + | biotin-(acetyl-CoA carboxylase) ligase TERM 392 314766 - 314748 - g 76 -9 -3.73647 | CGCAGCTATGAAGAA GTATGAAT CAG ATTCATAC GGTTACAATGGTGAT TERM 393 314857 - 314843 - g 73 -7.2 -4.05033 | TTGATCCTACACAAA CTGAAA TCG TTTCAG GTGAAGATGCACAAC LCK_00297 313939 - 314958 + | glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase TERM 394 315006 - 314983 - f 100 -14 -4.25104 | opp_overlap 314967 314983, overlap 314986 TTCGTTTCATTAAAA GAAGACCTAC TTGT GTAGGTCTTC TTTGTGTTGTGTCGG TERM 395 314983 - 315006 + F 100 -14 -4.31164 | opp_overlap 314983 314986, overlap 314967 TTCGTTTCATTAAAA GAAGACCTAC TTGT GTAGGTCTTC TTTGTGTTGTGTCGG TERM 396 315003 - 314986 - f 93 -9.9 -4.25256 | opp_overlap 314983 314967, overlap 314983 GTTTCATTAAAAGAA GACCTAC TTGT GTAGGTC TTCTTTGTGTTGTGT LCK_00298 315015 - 315887 + | phosphohydrolase TERM 397 315888 - 315904 + F 81 -5.8 -4.84262 | opp_overlap 315874 ATTCTTAATTTTTAA GCACCT ATAGC GGGTGC TTTTATTAATTCTTA TERM 398 316447 - 316463 + G 72 -8.7 -3.53444 | opp_overlap 316447, overlap 316444 ACGGGAAGACAGCAA CATCGGC AGA GCTGATG TTCGTTGTTGCACCA fabZ1 316050 - 316496 + | 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 399 316747 - 316774 + G 86 -10.7 -3.89756 | gap 1 AAAGGTTATATTGAG CGACGACGATCT AACAA AGATCGTCG-CG TTGTTCGTTTGGGGT LCK_00300 316480 - 316947 + | transcriptional regulator TERM 400 317154 - 317143 - g 79 -5.8 -4.86033 | AAAGTGGCAGAAAAA CTGC TTGA GCAG ACAGGGACGACGGCA TERM 401 317256 - 317268 + G 71 -6.2 -4.29472 | TCAAGGCGCAATCGG CGCC AATCA GGCG TTTGCTTTTGATTTG fabH2 316960 - 317928 + | 3-oxoacyl-[acyl-carrier-protein] synthase LCK_00302 318002 - 318241 + | Acyl carrier protein TERM 402 318597 - 318610 + G 73 -6.7 -4.21631 | opp_overlap 318591 GTGGCAACAGGTGCA GGTGA TCCA TCACC TTTCTTAGATGAATT LCK_00303 318297 - 319265 + | dioxygenase fabD 319315 - 320265 + | (acyl-carrier-protein) S-malonyltransferase TERM 403 320316 - 320335 + G 71 -6.4 -4.26076 | TCATCACGTGGTATT GGTTTGGC AATT GCCAAAGC TTTTGATGCCGCTGG LCK_00305 320262 - 320993 + | dehydrogenase TERM 404 321867 - 321838 - g 81 -12.1 -2.68612 | opp_overlap 321863, overlap 321835 ATGCATACCATATGA CTTCACCATCGCC TGAT GGCGAAGGTGCAG CACGTGCCATCAACG fabF 321012 - 322274 + | 3-oxoacyl-(acyl-carrier-protein) synthase accB 322278 - 322742 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 405 322761 - 322748 - f 79 -8.1 -4.01071 | AGAAGATTAATCAAA GCGGT TTTA ACCGC GTACATACCTGAATA TERM 406 323024 - 323049 + G 70 -5.4 -4.33417 | GCATTAACTGTCGAA GCATTAGCAC AGGCAG GTGCTGTTGC TTTATTATCAATGCC fabZ2 322832 - 323263 + | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase accC 323266 - 324642 + | biotin carboxylase TERM 407 324682 - 324644 - f 89 -9.1 -4.24285 | opp_overlap 324650, overlap 324648 324650 CAGATAGCGAATAAA CAGAC-ATACCGCGTATGG TCA CCATATGCGGTATTGT-TG TATCAACCTTAAAGG TERM 408 324678 - 324648 - f 89 -11.2 -3.42809 | opp_overlap 324650, overlap 324644 324650 TAGCGAATAAACAGA CATACCGCGTATGG TCA CCATATGCGGTATT GTTGTATCAACCTTA TERM 409 324676 - 324650 - f 93 -13.8 -3.27382 | opp_overlap 324650, overlap 324648 324644 GCGAATAAACAGACA TACCGCGTATGG TCA CCATATGCGGTA TTGTTGTATCAACCT TERM 410 324650 - 324676 + F 100 -16 -3.885 | opp_overlap 324650 324648 324644 GCGAATAAACAGACA TACCGCGTATGG TCA CCATATGCGGTA TTGTTGTATCAACCT TERM 411 325378 - 325396 + G 88 -11 -4.13767 | opp_overlap 325375 325378 TGACTGATCCAACCA CTGGCGGT GTA ACTGCCAG TTTTGCAATGCAGGG accD 324780 - 325619 + | Acetyl-CoA carboxylase, carboxyl transferase, beta subunit accA 325621 - 326421 + | Acetyl-CoA carboxylase alpha subunit TERM 412 326459 - 326432 - T 81 -10 -3.34043 | opp_overlap 326432 TCTAGTATGGTATAA TAGTTACGGACA TTAT TGTCGGTAACTA TTTATATTTTGGGGT TERM 413 326432 - 326459 + T 100 -10 -4.45771 | opp_overlap 326432 TCTAGTATGGTATAA TAGTTACGGACA TTAT TGTCGGTAACTA TTTATATTTTGGGGT TERM 414 326839 - 326876 + T 100 -13.7 -4.79352 | gap 1, opp_overlap 326851, overlap 326875 CACTAAGCATTTCAT GGCGTTGCAT-AAGGTTT CAA AAACCTTGATGTAGCGCC TTTTCTTATGAATAA TERM 415 327089 - 327108 + T 100 -9.2 -5.68489 | opp_overlap 327089 GGGTACACATTAAAA GCCACCGA TTGT TCGGAGGC TTTTTTATTATTCTA TERM 416 327108 - 327089 - T 93 -9.2 -4.39166 | opp_overlap 327089 GGGTACACATTAAAA GCCACCGA TTGT TCGGAGGC TTTTTTATTATTCTA LCK_00312 327834 - 327295 - | hypothetical protein TERM 417 327954 - 327937 - R 71 -6.3 -4.26076 | opp_overlap 327928 TTATGGCTACTAAAA GTAGTGT TTAC ACACCAC TTAAAAATAAATCAA TERM 418 327961 - 328014 + r 82 -7.9 -4.58303 | gap 1, opp_overlap 327966, overlap 327965 327966 ACACACCACTTAAAA ATAAA-TCAAACTCAAATTCACTAAT TTT GTTAGTAAATTTGAGTTTGAGTTTGA TTTTGTAGTGTTTAA TERM 419 327965 - 328009 + r 100 -12.5 -4.28487 | opp_overlap 327966, overlap 327961 327966 ACCACTTAAAAATAA ATCAAACTCAAATTCACTAAT TTT GTTAGTAAATTTGAGTTTGAG TTTGATTTTGTAGTG TERM 420 327966 - 328008 + r 100 -16 -3.16008 | opp_overlap 327966, overlap 327965 327961 CCACTTAAAAATAAA TCAAACTCAAATTCACTAAT TTT GTTAGTAAATTTGAGTTTGA GTTTGATTTTGTAGT TERM 421 328008 - 327966 - R 100 -17.5 -4.89063 | opp_overlap 327965 327961 327966 CCACTTAAAAATAAA TCAAACTCAAATTCACTAA TTTTG TTAGTAAATTTGAGTTTGA GTTTGATTTTGTAGT LCK_00313 328581 - 328060 - | hypothetical protein LCK_00314 329531 - 328782 - | methyltransferase-like protein TERM 422 329585 - 329599 + r 100 -10 -4.72272 | GCACGTGATATGTAC GCACTC TAT GAGTGC TTTTTAGTGAAAAGA LCK_00315 330118 - 329603 - | adenylate kinase TERM 423 329784 - 329798 + g 75 -7.8 -4.02581 | overlap 329779 TTATCGTGCATATCT GGGCGA GAT TTGCCC TTATATTTTATGAAA TERM 424 330183 - 330197 + r 71 -8.6 -2.96274 | overlap 330186 CTTGGTGTTATTTAT CTGTGA CAA TCACAG TGTCATTATCACCAA LCK_00316 330609 - 330175 - | hypothetical protein LCK_00317 330782 - 331546 + | transcriptional activator of multidrug-efflux transporter genes TERM 425 331588 - 331611 + T 100 -14 -4.54449 | TATACGTGATTTTTA GCCACTTATC TTTT GATAAGTGGC TTTTATATGGGCTGT LCK_00318 332029 - 331658 - | transcriptional regulator LCK_00319 332320 - 332514 + | hypothetical protein LCK_00320 332565 - 332858 + | hypothetical protein TERM 426 333018 - 332976 - T 100 -17.4 -3.73914 | opp_overlap 332981, overlap 332981 ATTATTGATTAAGAA CAAAAGAACTGTGGATTAAA CGC CTTAATCCACAGTTCTTTTT ATTGCTATTGTCTAG TERM 427 332981 - 333013 + T 100 -16.6 -5.19251 | opp_overlap 332976 332981 TGATTAAGAACAAAA GAACTGTGGATTAA ACGCC TTAATCCACAGTTC TTTTTATTGCTATTG TERM 428 333013 - 332981 - T 100 -17.3 -4.92757 | opp_overlap 332981, overlap 332976 TGATTAAGAACAAAA GAACTGTGGATTAAA CGC CTTAATCCACAGTTC TTTTTATTGCTATTG LCK_00321 333559 - 333023 - | acetyltransferase LCK_00322 334055 - 333714 - | ribonucleases G and E yphA 334726 - 334100 - | NADH dehydrogenase LCK_00324 334839 - 335315 + | tryptophan-rich sensory protein LCK_00325 335845 - 335327 - | hypothetical protein TERM 429 336557 - 336575 + G 91 -11.8 -3.87641 | AGACACAGCATCGAT TGACGTGA TAC TCACGTCA TTTATGAAAGGTATT LCK_00326 336015 - 336599 + | AcrR family transcriptional regulator LCK_00327 336621 - 337994 + | thermostable carboxylesterase TERM 430 338048 - 337996 - T 95 -14.5 -2.80499 | opp_overlap 337997 338011, overlap 338011 GAATAGTTGAATAAC TGTTAACTAAAAAAAGGTGTCCTTA CGT CAAGGACACCTTTTTTTAATCGACT TTTGGAAAACGCAGT TERM 431 337997 - 338047 + T 100 -15.1 -4.07568 | opp_overlap 337996 338011, overlap 338011 AATAGTTGAATAACT GTTAACTAAAAAAAGGTGTCCTT ACGTC AAGGACACCTTTTTTTAATCGAC TTTTGGAAAACGCAG TERM 432 338033 - 338011 - T 100 -12.8 -5.63103 | opp_overlap 337997 338011, overlap 337996 TGTTAACTAAAAAAA GGTGTCCTTA CGT CAAGGACACC TTTTTTTAATCGACT TERM 433 338011 - 338033 + T 100 -12.1 -5.52986 | opp_overlap 338011 337996, overlap 337997 TGTTAACTAAAAAAA GGTGTCCTT ACGTC AAGGACACC TTTTTTTAATCGACT LCK_00328 338527 - 338039 - | hypothetical protein TERM 434 338725 - 338702 - R 100 -9.6 -5.17353 | opp_overlap 338702 ATATGCATTAAAAAA CACCTCACGA ATTA TCGCGAAGTG TTTTTTTGATTTTAA TERM 435 338702 - 338725 + r 91 -5.2 -5.79588 | opp_overlap 338702 ATATGCATTAAAAAA CACCTCACGA ATTA TCGCGAAGTG TTTTTTTGATTTTAA LCK_00329 339033 - 338737 - | hypothetical protein rnhC 339990 - 339064 - | ribonuclease H LCK_00331 340063 - 340467 + | hypothetical protein TERM 436 340839 - 340849 + G 72 -3.2 -5.03314 | TACGGCTTTATTGGT GCAG TGA TTGC TTTTTTCACACTCCA LCK_00332 340464 - 340985 + | colicin V production protein precursor TERM 437 341199 - 341210 + G 70 -5.8 -4.45945 | opp_overlap 341199 ACTGGTTAGCAGAAA CAGC CGAT GCTG TTTTGATTGATCGCT TERM 438 341969 - 341957 - g 70 -3.4 -4.87008 | AATACAGAAAATAAA GTTG ACTTG CAAC AAGCTTGGCATCCGC TERM 439 342992 - 342980 - g 70 -7.7 -3.68619 | overlap 342970 GCCAAGCGAGCTAAA CAGCT AGC AGCTG GTGATGAGATTACTG mutS1 341051 - 343456 + | mismatch repair ATPase TERM 440 343827 - 343843 + G 71 -6.6 -4.13654 | ATTATTACGTTTGTC CAATGG CCATA CCATTG TTTCTCATTTGCGCA mutM 343633 - 344475 + | formamidopyrimidine-DNA glycosylase LCK_00335 344484 - 345215 + | integral membrane protein coaE 345215 - 345835 + | dephospho-CoA kinase TERM 441 346821 - 346833 + G 74 -9.1 -3.47387 | GTGGCACAAAGTGTT CTGCC AAT GGCAG TTATCAATATTTTGG LCK_00337 345822 - 347159 + | replication initiation/membrane attachment protein TERM 442 347479 - 347463 - g 87 -5.1 -5.52384 | TGCCGATGAAAAAAA GCAGCAA CAG TTGATGC AGGCTGATAAGCTCA LCK_00338 347161 - 348087 + | DNA replication protein TERM 443 348992 - 349007 + G 70 -3.2 -4.88228 | GATATTTATAGCTGA GACCTT GCCA ATGGTC TTTTTGATGTTACGT LCK_00339 348093 - 349172 + | multitransmembrane protein TERM 444 349353 - 349364 + G 70 -5.8 -4.47183 | TGAGTCTAATCATTT TGGC TGTC GCCA TTTATTTAGGTGCTG LCK_00340 349169 - 349951 + | multitransmembrane protein LCK_00341 349935 - 350237 + | hypothetical protein LCK_00342 350287 - 350682 + | hypothetical protein TERM 445 350833 - 350864 + T 100 -14.6 -3.78837 | opp_overlap 350840, overlap 350840 ACTCCGGTTATTACC TTAAAAAGCGCTGC TAAT GCAGCGCTTTTTTA TTGTGTTAGTTGTGT TERM 446 350857 - 350840 - T 100 -12.7 -4.63527 | opp_overlap 350833 350840 TTATTACCTTAAAAA GCGCTGC TAAT GCAGCGC TTTTTTATTGTGTTA TERM 447 350840 - 350857 + T 100 -12.7 -5.64304 | opp_overlap 350840, overlap 350833 TTATTACCTTAAAAA GCGCTGC TAAT GCAGCGC TTTTTTATTGTGTTA LCK_00343 351845 - 350862 - | glycosyltransferase TERM 448 351977 - 351956 - H 79 -10.3 -2.95093 | opp_overlap 351939 351958, overlap 351955 351958 ATATTTTAATGAAAT TATCATGGT TTTA ACCATGATA TGTCGCATAATAGAG TERM 449 351975 - 351958 - H 71 -8.5 -3.02434 | opp_overlap 351939 351958, overlap 351956 351955 ATTTTAATGAAATTA TCATGGT TTTA ACCATGA TATGTCGCATAATAG bmpA 352049 - 353110 + | basic membrane protein A TERM 450 353126 - 353148 + F 100 -13.5 -4.183 | opp_overlap 353112 353126 353140 353144 ATGATGACATGACAA GCGCCTCAA GCAAA TTGAGGCGC TTTATTGCGCCTTCA TERM 451 353148 - 353126 - f 95 -13.5 -3.48668 | opp_overlap 353126, overlap 353112 353140 353144 ATGATGACATGACAA GCGCCTCAA GCAAA TTGAGGCGC TTTATTGCGCCTTCA glnPH1 353253 - 354701 + | amino acid ABC transporter periplasmic protein LCK_00346 354698 - 355450 + | ABC-type polar amino acid transport system, ATPase component TERM 452 355519 - 355502 - f 100 -9.1 -5.43514 | opp_overlap 355502 355504 AAAATAATTAAAAAA GCCGACC ACTA GGTCGAC TTTTTTGTGGGATAA TERM 453 355502 - 355519 + F 89 -6.9 -5.26316 | opp_overlap 355502, overlap 355504 AAAATAATTAAAAAA GCCGACC ACTA GGTCGAC TTTTTTGTGGGATAA glnPH2 355545 - 356984 + | amino acid ABC transporter periplasmic protein TERM 454 356993 - 357035 + F 100 -18.8 -4.21319 | opp_overlap 357000, overlap 356995 357000 TAAATAATTATGTGT TATAAAAGCCTTCAAACCGT ATT ATGGTTTGGAGGCTTTTATG TTTGTTGCAATTAAT TERM 455 356995 - 357033 + F 100 -19.2 -3.70139 | opp_overlap 357000, overlap 356993 357000 AATAATTATGTGTTA TAAAAGCCTTCAAACCGT ATT ATGGTTTGGAGGCTTTTA TGTTTGTTGCAATTA TERM 456 357028 - 357000 - f 100 -10.3 -4.37886 | opp_overlap 356995 356993 357000 TTATGTGTTATAAAA GCCTTCAAACCGT ATT ATGGTTTGGAGGC TTTTATGTTTGTTGC TERM 457 357000 - 357028 + F 100 -14.7 -4.89838 | opp_overlap 357000, overlap 356995 356993 TTATGTGTTATAAAA GCCTTCAAACCGT ATT ATGGTTTGGAGGC TTTTATGTTTGTTGC coiA 357033 - 358070 + | competence protein TERM 458 358092 - 358076 - f 76 -6.7 -4.58242 | overlap 358069 AAAAAAGTGATAAAA TAAGATA TTA TATCTTA GAAAGGAACGCAACA pepF2 358128 - 359945 + | oligoendopeptidase F cdd 359997 - 360398 + | cytidine deaminase LCK_00351 360418 - 361338 + | 2-oxo-4-phenylbutanoate reductase TERM 459 361344 - 361366 + T 100 -7.1 -5.80951 | gap 1, opp_overlap 361344 GAACGCATAAAAAAA CCACATACCA GATT TGGT-TGTGG TTTTTTATTTTGGCT TERM 460 361366 - 361344 - T 93 -7.1 -5.66684 | gap 1, opp_overlap 361344 GAACGCATAAAAAAA CCACATACCA GATT TGGT-TGTGG TTTTTTATTTTGGCT LCK_00352 362351 - 361371 - | sucrose operon repressor LCK_00353 362529 - 363545 + | threonine dehydrogenase LCK_00354 363550 - 364281 + | amino acid transporter TERM 461 364577 - 364589 + G 77 -7.7 -4.24342 | opp_overlap 364573 364577 TATGGATACAACTGA TGCTG ACG CAGCA TTTGTTGCTGCAAAG LCK_00355 364347 - 364727 + | lactoylglutathione lyase TERM 462 364769 - 364745 - f 100 -8.6 -6.08342 | opp_overlap 364745 TAATAAATAAAAAAA CGCACGCTTT GAATA AAAGTGTGCG TTTTTTATTGCTTAG TERM 463 364745 - 364769 + F 100 -10.8 -5.5604 | opp_overlap 364745 TAATAAATAAAAAAA CGCACGCTTT GAATA AAAGTGTGCG TTTTTTATTGCTTAG sucP 364964 - 366421 + | sucrose phosphorylase LCK_00357 366360 - 367313 + | putative fructokinase LCK_00358 367385 - 367747 + | transcriptional regulator TERM 464 367972 - 368004 + F 100 -16.6 -5.4505 | CACGGTTGTTTGACG TCCCATGTTATCTT AAGAG AAGATAACATGGGA TTTTTTGTTGCAACA TERM 465 368111 - 368098 - g 77 -8.1 -4.17089 | overlap 368089 CTTAAAGCCTTAAAA GCGAC AGCT GTCGC AAGAATTAATGCTAC pheS 368065 - 369114 + | phenylalanyl-tRNA synthetase, alpha subunit pheT 369117 - 371576 + | phenylalanyl-tRNA synthetase, beta subunit murA 371657 - 372943 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase rpmE 373048 - 373314 + | ribosomal protein L31 TERM 466 373325 - 373354 + F 100 -14.5 -5.54885 | opp_overlap 373330, overlap 373330 AGTAATTGTTCTTAG TAAAAGCGTTCAC GGTA GTGAGCGCTTTTA TTTTTTATTCATCTT TERM 467 373330 - 373349 + F 100 -10 -5.55001 | opp_overlap 373330, overlap 373325 TTGTTCTTAGTAAAA GCGTTCAC GGTA GTGAGCGC TTTTATTTTTTATTC TERM 468 373349 - 373330 - f 78 -7.8 -4.25104 | opp_overlap 373330 373325 TTGTTCTTAGTAAAA GCGTTCAC GGTA GTGAGCGC TTTTATTTTTTATTC rumA2 373433 - 374821 + | 23S rRNA (uracil-5-)-methyltransferase murF 374935 - 376269 + | UDP-N-acetylmuramyl pentapeptide synthase LCK_00365 376290 - 377426 + | Beta-lactamase class C or other penicillin binding protein LCK_00366 377465 - 379033 + | putative ATP-dependent RNA helicase TERM 469 379073 - 379096 + F 81 -6 -4.98531 | gap 1, opp_overlap 379065 379073 GATAAAACGATGAAA CCGTCCAAACA AGC TGT-TGGTCGG TTTTTCATTTCCCAG TERM 470 379876 - 379855 - g 77 -6.5 -4.57209 | overlap 379857 ATATCAAGTACAAAA TACTGCCAC TGCA GTGGCGGCA GTCAACGCTTTTGAT folC1 379139 - 380320 + | folylpolyglutamate synthase LCK_00368 380317 - 381720 + | major facilitator superfamily permease LCK_00369 381750 - 382361 + | DNA repair protein TERM 471 382882 - 382868 - g 71 -6.4 -4.29139 | CGAAAGCTAAAAGAA GAAGGC GTT ACCTTC CAAAACCATGTTAAT tgt 382523 - 383740 + | queuine tRNA-ribosyltransferase yajC 383829 - 384200 + | preprotein translocase, YajC subunit TERM 472 384214 - 384229 + F 95 -9 -5.08824 | opp_overlap 384214 AAGCGGTATAATAAA GAGAGC AATA GCTCTC TTTTTTGAATGGAAA TERM 473 384229 - 384214 - f 89 -9 -4.31835 | opp_overlap 384214 AAGCGGTATAATAAA GAGAGC AATA GCTCTC TTTTTTGAATGGAAA TERM 474 384308 - 384330 + G 100 -7 -5.8187 | opp_overlap 384306 384308 384321 TGTATATGACGAATA TGGTAGTATG ACA CATGCGACCA TTTTTTTGTTGCATG LCK_00372 384252 - 384989 + | alpha/beta superfamily hydrolase/acyltransferase TERM 475 385454 - 385480 + G 84 -10.3 -3.94051 | opp_overlap 385459, overlap 385450 385457 AAAACATGATTTGGT TAATAGCCATC TTAAT GATGGCTATTG TTGTTGGTTTCATTT TERM 476 385457 - 385477 + G 86 -9.8 -4.067 | opp_overlap 385459, overlap 385450 385454 ACATGATTTGGTTAA TAGCCATC TTAAT GATGGCTA TTGTTGTTGGTTTCA LCK_00373 384976 - 387522 + | integral membrane protein TERM 477 387749 - 387739 - g 70 -5.4 -4.4261 | TGTCGAAGAGCAAAA TGGT AAA ACCA TCAACTGGCAATCGG LCK_00374 387563 - 388237 + | HD superfamily hydrolase TERM 478 388311 - 388324 + G 83 -5.3 -5.27938 | GCGTGAAAAAATAGG TCATG AGGG CATGA TTTTTGTTTCAGCAT TERM 479 388566 - 388545 - g 70 -3 -5.03994 | TGTGACAGATAAAAA TTCTTGGG GTGATG CGCAAGAA ACAATAGGTATCGGC LCK_00375 388267 - 388764 + | NTP pyrophosphohydrolase including oxidative damage repair enzymes TERM 480 390144 - 390130 - g 70 -8.6 -3.31144 | opp_overlap 390132 TTCCCATTGCGACAA CAGCAA AAA TTGCTG GTATGACTGATGGTG LCK_00376 388803 - 390785 + | peptide ABC transporter ATPase TERM 481 390795 - 390810 + F 88 -6.1 -5.61824 | opp_overlap 390795 GATTAATTCAAAAAA GCGCA CATGAA TGCGC TTTTTTTCACTTTTG TERM 482 390810 - 390795 - f 84 -6.8 -5.17576 | opp_overlap 390795 GATTAATTCAAAAAA GCGCAC ATGA ATGCGC TTTTTTTCACTTTTG LCK_00377 390922 - 392640 + | ABC transporter, ATP-binding/permease protein TERM 483 393105 - 393115 + G 71 -6.8 -4.10188 | TTTTCGAATTGTTGT CGCA ATT TGCG TTGTTTGTGGCTGTC LCK_00378 392642 - 394423 + | ABC-type multidrug transport system, ATPase and permease components TERM 484 394448 - 394429 - f 93 -7.8 -5.52384 | opp_overlap 394429 394441 TTTTGAGTAAAAAAA GCTGCGTC TTGA GACGTAGC TTTTTTTATTAGCGA TERM 485 394429 - 394448 + F 100 -10 -5.7946 | opp_overlap 394429, overlap 394441 TTTTGAGTAAAAAAA GCTGCGTC TTGA GACGTAGC TTTTTTTATTAGCGA LCK_00379 394567 - 395796 + | glycosyltransferase LCK_00380 395797 - 396804 + | glycosyltransferase TERM 486 397484 - 397468 - gf 80 -2.3 -5.65927 | CAGTTAAACAAAAAA TTGACAA CTT TCATCAA GAATCACGTCGTGTG LCK_00381 396822 - 397880 + | integral membrane protein TERM 487 397883 - 397869 - gf 100 -5 -5.80248 | opp_overlap 397869 GAAGATACAAAAAAA TCACCA GAT TAGTGA TTTAAATCAGATATT LCK_00382 397852 - 398118 + | hypothetical protein TERM 488 399395 - 399371 - g 73 -7.2 -4.07885 | TACTTCTTCTCAAAA GCTTACTATC CTAAT GCTAGTAAGC CAAACTTCAATGTTG LCK_00383 398204 - 400363 + | phosphoglycerol transferase TERM 489 400396 - 400361 - f 79 -8.5 -3.80841 | opp_overlap 400361 400366 400394, overlap 400366 400374 AGTAGCAGTAGTAAA TAAAACGAGCAAACA ATAGAA CGTTTGTTCGTTTTA TTGTATAATAATATT TERM 490 400361 - 400396 + F 82 -10 -3.57389 | opp_overlap 400361 400366 400374, overlap 400366 400394 AGTAGCAGTAGTAAA TAAAACGAGCAAAC AATAGAAC GTTTGTTCGTTTTA TTGTATAATAATATT TERM 491 400391 - 400366 - f 70 -4 -4.95484 | opp_overlap 400361 400366, overlap 400361 400374 CAGTAGTAAATAAAA CGAGCAAACA ATAGAA CGTTTGTTCG TTTTATTGTATAATA TERM 492 400366 - 400391 + F 77 -5.5 -4.85918 | opp_overlap 400366 400361 400374, overlap 400361 CAGTAGTAAATAAAA CGAGCAAAC AATAGAAC GTTTGTTCG TTTTATTGTATAATA TERM 493 401433 - 401445 + G 91 -6.3 -5.39221 | TTACTTTACTCGATT TCTTC CCT GAAGA TTTTTTGATTATTGT uvrB 400436 - 402442 + | excinuclease ABC, B subunit TERM 494 402598 - 402584 - g 74 -6.4 -4.40232 | overlap 402586 402587 AGAAAAATATAGAAA TACGTG GTG CACGCA CCCAAAATTTAAAAA TERM 495 402974 - 402959 - g 72 -9 -3.41795 | AAATTGTTATGACAA TCGACC AGAT GGTCGA GAAAGTTTATCAGCA uvrA 402562 - 405432 + | excinuclease ABC subunit A TERM 496 405430 - 405487 + F 100 -19.8 -2.84795 | opp_overlap 405430 405433 405434 405446, overlap 405430 405433 405446 CAAGAAAATAAAGCA TAATTTAAAATAAAAAGCATGAACAC GATTAA GCGTTCATGCTTTTTATTTTAAGTTA CTTTGATGCGCCTTT TERM 497 405430 - 405488 + F 100 -13.8 -3.75863 | gap 1, opp_overlap 405430 405433 405434 405446, overlap 405430 405433 405446 CAAGAAAATAAAGCA -TAATTTAAAATAAAAAGCATGAACAC GATTAA GCGTTCATGCTTTTTATTTTAAGTTAC TTTGATGCGCCTTTT TERM 498 405487 - 405430 - f 100 -19.8 -3.31288 | opp_overlap 405430 405430 405433 405446, overlap 405433 405434 405446 CAAGAAAATAAAGCA TAATTTAAAATAAAAAGCATGAACAC GATTAA GCGTTCATGCTTTTTATTTTAAGTTA CTTTGATGCGCCTTT TERM 499 405433 - 405484 + F 100 -17.1 -3.56704 | opp_overlap 405433 405430 405434 405446, overlap 405430 405430 405446 GAAAATAAAGCATAA TTTAAAATAAAAAGCATGAACAC GATTAA GCGTTCATGCTTTTTATTTTAAG TTACTTTGATGCGCC TERM 500 405484 - 405433 - f 100 -17.1 -3.74652 | opp_overlap 405430 405430 405433 405446, overlap 405430 405434 405446 GAAAATAAAGCATAA TTTAAAATAAAAAGCATGAACAC GATTAA GCGTTCATGCTTTTTATTTTAAG TTACTTTGATGCGCC TERM 501 405483 - 405434 - f 100 -20.6 -2.83164 | opp_overlap 405433 405430 405430 405446, overlap 405433 405430 405446 AAAATAAAGCATAAT TTAAAATAAAAAGCATGAACAC GATTAA GCGTTCATGCTTTTTATTTTAA GTTACTTTGATGCGC TERM 502 405446 - 405471 + F 93 -7.6 -5.49568 | opp_overlap 405446 405434 405433 405430, overlap 405433 405430 405430 AATTTAAAATAAAAA GCATGAACAC GATTAA GCGTTCATGC TTTTTATTTTAAGTT TERM 503 405471 - 405446 - f 100 -9.8 -5.49568 | opp_overlap 405433 405430 405430 405446, overlap 405434 405433 405430 AATTTAAAATAAAAA GCATGAACAC GATTAA GCGTTCATGC TTTTTATTTTAAGTT TERM 504 405529 - 405552 + F 71 -9 -3.09518 | opp_overlap 405534 405535, overlap 405535 AATCGTGAATTGCCT TTAAAGCACG CTTA CGTGTTTTAA TATTGGGGCTTTTCA TERM 505 405535 - 405546 + F 72 -5.8 -4.4261 | opp_overlap 405535 405534, overlap 405529 GAATTGCCTTTAAAG CACG CTTA CGTG TTTTAATATTGGGGC TERM 506 405775 - 405764 - f 70 -4.4 -4.77896 | opp_overlap 405771 TAATGAAGTTAAAAA TCGA AAGG TCGA AGTGACTCCTTGGAT LCK_00386 405856 - 406830 + | hypothetical protein TERM 507 407535 - 407524 - g 72 -3.6 -5.1615 | overlap 407526 CTAACATTCAAAAAA CAGC TGAT GCCG CTAATAAACAAGTGC LCK_00387 406830 - 407774 + | hypothetical protein clpP 407901 - 408503 + | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 508 408542 - 408501 - f 100 -10.3 -4.09292 | opp_overlap 408499 408512, overlap 408512 AAGCCAACAACTAAA TAAACAAAAAACGCAGGGG TAAT CGTCTGCGTTTTTTGTTTG CATTAAATACAATAT TERM 509 408531 - 408512 - f 89 -3.4 -5.85425 | opp_overlap 408499 408512, overlap 408501 TAAATAAACAAAAAA CGCAGGGG TAAT CGTCTGCG TTTTTTGTTTGCATT TERM 510 408512 - 408531 + F 86 -5.6 -5.67283 | opp_overlap 408512 408501, overlap 408499 TAAATAAACAAAAAA CGCAGGGG TAAT CGTCTGCG TTTTTTGTTTGCATT TERM 511 408653 - 408663 + F 70 -4 -4.94972 | ATAAATTTTGGAGGA TCTT ATG AAGA TTTTTGCTTATGGTA ldhD 408657 - 409655 + | D-lactate dehydrogenase TERM 512 409670 - 409689 + F 70 -7 -3.86283 | opp_overlap 409670 AGACTTATTGACTAA GCTCGGGC ATTT GCGCGGGC TTTAGTGTGAATTGA TERM 513 410101 - 410120 + G 70 -8.6 -3.3785 | overlap 410094 410105 410109 GATGTTGGTGTGGTA GCAATTGC TACG GCAGTTGC TTCTGGCTCAATTAA LCK_00390 409744 - 410982 + | membrane protein, putative toxin regulator TERM 514 410994 - 411019 + F 100 -12.7 -5.4148 | opp_overlap 410996 GTAAATTATTTTTAA GACGAGATATG TTAG CGTATCTCGTC TTTTTTGCTTCTTTA LCK_00391 411253 - 411912 + | hypothetical protein TERM 515 411911 - 411940 + F 100 -10.9 -4.73682 | opp_overlap 411916, overlap 411916 CAAATAATTGGTATT AAAAAGGTAACAG CGTA CTGTTACCTTTTA TTTTGTCTTGTGCGA TERM 516 411935 - 411916 - f 100 -10.8 -4.73388 | opp_overlap 411916 411911 AATTGGTATTAAAAA GGTAACAG CGTA CTGTTACC TTTTATTTTGTCTTG TERM 517 411916 - 411935 + F 100 -10.8 -5.26907 | opp_overlap 411916, overlap 411911 AATTGGTATTAAAAA GGTAACAG CGTA CTGTTACC TTTTATTTTGTCTTG LCK_00392 412007 - 412561 + | HAD superfamily hydrolase LCK_00393 412551 - 413696 + | GTPase LCK_00394 413696 - 414010 + | RNA-binding protein nadD 414024 - 414662 + | nicotinate (nicotinamide) nucleotide adenylyltransferase LCK_00396 414655 - 415245 + | HD superfamily hydrolase yqeL 415266 - 415637 + | YqeL TERM 518 415643 - 415660 + F 100 -9.9 -5.80817 | AGCAGACTAGTTTGA GACAAGC AGCA GCTTGTC TTTTTTTCTGTTAAA LCK_00398 415685 - 416443 + | SAM-dependent methyltransferase TERM 519 417487 - 417461 - g 75 -5.9 -4.79949 | opp_overlap 417464, overlap 417464 GTGCTAAAAAAACAA CCACCTTACCA CTCAT TAGTAAGGTTG ATCAGCATTTAGCCA LCK_00399 416440 - 417633 + | nucleotidyltransferase LCK_00400 417630 - 418175 + | metal-binding protein TERM 520 418238 - 418252 + F 70 -7.1 -3.76373 | AAAAGAAATATGGAT TCGGC AATGA GCCGA TTTAAATGTTGAGGA rrp3 418274 - 418963 + | response regulator hpk3 418973 - 420079 + | Signal transduction histidine kinase LCK_00403 420057 - 420329 + | acylphosphatase TERM 521 420583 - 420596 + G 84 -2.4 -5.75342 | CGGCAATTTTGCGTT TGGT CTTGCT ACCA TTTTTTTTGAACCAA LCK_00404 420381 - 421295 + | preprotein translocase subunit YidC TERM 522 421300 - 421321 + F 100 -11.7 -4.89562 | opp_overlap 421300 AACAGCGCTAATTAA GTACGTCAA AATC TTGACGTAC TTTTGTTAGTTTTAC TERM 523 421321 - 421300 - f 89 -11.7 -3.35639 | opp_overlap 421300 AACAGCGCTAATTAA GTACGTCAA AATC TTGACGTAC TTTTGTTAGTTTTAC LCK_00405 421356 - 422129 + | rRNA methylase secG 422210 - 422452 + | preprotein translocase, SecG subunit TERM 524 422463 - 422488 + F 88 -6.2 -5.58522 | ACTAAAATTATAATG GTCAGTTTGC TTTTTT GTAGACTGAC TTTTTATTTTGTATA TERM 525 422741 - 422766 + G 74 -6.1 -4.3295 | CTGGTTATACTCTTG GCGCATATCGT GCCA ACGATAAGGGC TTTGGTTTTGTTAAA LCK_00407 422524 - 424848 + | exoribonuclease R smpB 424875 - 425342 + | SsrA-binding protein TERM 526 425344 - 425355 + F 93 -5.8 -5.95539 | opp_overlap 425344 425343 GGTTAAAACATTAAG GGCT AATT AGCC TTTTTTTGTTTGACG TERM 527 426049 - 426066 + G 73 -7.7 -3.81741 | GGTCGTCTGCAGATG CAGTGGC TGAT GTCACTG TTTCAGTTGTCCATT TERM 528 426982 - 426960 - g 70 -8.4 -3.41738 | overlap 426958 CATGTCAAGATAACA GTCGTACGTG AAA CACGTGCAAC AGATTACGCACACTA LCK_00409 425442 - 426998 + | HD superfamily hydrolase TERM 529 426999 - 427036 + F 72 -8 -3.41051 | opp_overlap 427007, overlap 427007 GATTACGCACACTAA GAGAAAAAGTTACTCA TTTCAT TGAGTAACTTTTTTTG TTATACTAGAAGTAC TERM 530 427028 - 427007 - f 88 -7.4 -5.13344 | opp_overlap 426999 427007 ACACTAAGAGAAAAA GTTACTCA TTTCAT TGAGTAAC TTTTTTTGTTATACT TERM 531 427007 - 427028 + F 100 -7.4 -5.89921 | opp_overlap 427007, overlap 426999 ACACTAAGAGAAAAA GTTACTCA TTTCAT TGAGTAAC TTTTTTTGTTATACT LCK_00410 427128 - 427529 + | TMnm related protein TERM 532 427573 - 427588 + G 74 -9 -3.5774 | opp_overlap 427565, overlap 427571 TATATTAGCTGGGGC TGCTGC AATA GCAGCA TTTAAAGCCTTACCT TERM 533 428064 - 428045 - g 71 -5 -4.51363 | GACGAAACAGCAAAA GTAGCC ACTGAAAA GGCTAC TGAAATTAAAGACGA LCK_00411 427529 - 428110 + | TMnm related protein TERM 534 428119 - 428136 + F 100 -7.1 -6.0458 | TAAGTAATACACGGA CTTGATT ACAG AATCAAG TTTTTTTTGATTTAT LCK_00412 428266 - 428616 + | hypothetical protein TERM 535 428816 - 428828 + G 80 -7.7 -4.40963 | TAGTCGGGAGACATT TGAGG TTG CCTCA TTCTTTTTAGACGAT LCK_00413 428646 - 429722 + | Metaphase chromosomal protein 1 TERM 536 429732 - 429759 + T 100 -11.4 -5.1675 | opp_overlap 429732 GCTTAAATCAAAAAA GATACAGCTGAT AACT AACAGCTGTATC TTTTTTGATGCGTGA TERM 537 429759 - 429732 - T 100 -11.4 -5.37593 | opp_overlap 429732 GCTTAAATCAAAAAA GATACAGCTGAT AACT AACAGCTGTATC TTTTTTGATGCGTGA LCK_00414 430087 - 429746 - | hypothetical protein TERM 538 430243 - 430196 - H 100 -13.2 -4.08767 | gap 1, opp_overlap 430183 430207, overlap 430201 430207 CTTATTTTTTTAAAA TATCATTCAAACAGCCAATTAAA CGC TTTAATTGGCTGTTTGAACT-TA GGGGAACATATATTC TERM 539 430239 - 430201 - H 100 -22.2 -2.93623 | opp_overlap 430207, overlap 430196 430207 TTTTTTAAAATATCA TTCAAACAGCCAATTAAA CGC TTTAATTGGCTGTTTGAA CTTAGGGGAACATAT TERM 540 430207 - 430233 + H 100 -15.4 -3.66178 | opp_overlap 430201 430196 430207 AAAATATCATTCAAA CAGCCAATTAAA CGC TTTAATTGGCTG TTTGAACTTAGGGGA TERM 541 430233 - 430207 - H 100 -15.4 -3.73281 | opp_overlap 430207, overlap 430201 430196 AAAATATCATTCAAA CAGCCAATTAAA CGC TTTAATTGGCTG TTTGAACTTAGGGGA gmk2 430344 - 430940 + | guanylate kinase rpoZ 430952 - 431164 + | DNA-directed RNA polymerase, omega subunit LCK_00417 431208 - 431717 + | peptidyl-prolyl cis-trans isomerase TERM 542 431709 - 431725 + F 95 -8.7 -5.58179 | opp_overlap 431708 AATACGATAGAAATT GCAGACT AAG GGTCTGC TTTTTTGTTATAATA LCK_00418 431758 - 432138 + | RNA-binding protein LCK_00419 432151 - 432519 + | hypothetical protein TERM 543 434485 - 434466 - f 72 -9.2 -2.65808 | opp_overlap 434469 434472, overlap 434463 434478 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 544 434657 - 434641 - f 81 -10.9 -2.62616 | TCAGCTGGGAGAGCA CCTGCTT TGC AAGCAGG GGGTCAGCGGTTCGA TERM 545 434816 - 434801 - f 77 -6.2 -4.65219 | opp_overlap 434800 ACAACACAAAAAGAA GTTCTT TAAA AAGAAC GGTTTAATCGCAGGT TERM 546 438012 - 438029 + F 85 -4.1 -5.68039 | overlap 438015 TGCCGTACATAGGGA GTGCTCT GAAA AGAGTGC TTTTTTTATGCGTTT spxA 438140 - 438574 + | transcriptional regulator Spx TERM 547 438569 - 438584 + F 86 -5.4 -5.74086 | opp_overlap 438569 TTAATTGTTGAAGAA GGCTGA ACAG TCAGTC TTTTTTCTTTACTTT mecA 438645 - 439328 + | negative regulator of genetic competence, sporulation and motility LCK_00422 439390 - 439791 + | rhodanese-related sulfurtransferase TERM 548 439843 - 439792 - f 70 -4.6 -4.78984 | opp_overlap 439800, overlap 439802 439810 AAAAAAACAAAATAA TTTTTATAGAGCTGATAATGTTAT GACG ATAACATTATCAGCTCTTTTGCTA GATCAATAAACGAAT TERM 549 439800 - 439835 + F 100 -19.4 -4.28548 | opp_overlap 439792 439802 439810 AAAATAATTTTTATA GAGCTGATAATGTTAT GACG ATAACATTATCAGCTC TTTTGCTAGATCAAT TERM 550 439833 - 439802 - f 100 -16.2 -2.90486 | opp_overlap 439800, overlap 439792 439810 AATAATTTTTATAGA GCTGATAATGTTAT GACG ATAACATTATCAGC TCTTTTGCTAGATCA lplL 439943 - 440953 + | lipoate-protein ligase A pdhA 440946 - 442082 + | pyruvate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit pdhB 442084 - 443064 + | pyruvate dehydrogenase complex, dehydrogenase (E1) component, beta subunit pdhC 443057 - 444379 + | pyruvate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component TERM 551 445483 - 445469 - g 85 -11.4 -3.29511 | opp_overlap 445467 TTGAGTTGGCGACAA CTGGCG AAA CGCCAG AGTCTGCTAAGGCAA lpdA 444382 - 445791 + | pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component cpo 445820 - 446623 + | alpha/beta superfamily hydrolase/acyltransferase TERM 552 446634 - 446614 - T 84 -5.4 -5.4756 | opp_overlap 446607 446614 AATCTCAATAAAAAA CGCCAC CTGAGTTGT GTGGCG TTTTTTTATTTATGC TERM 553 446614 - 446634 + T 93 -5.4 -6.02919 | opp_overlap 446614, overlap 446607 AATCTCAATAAAAAA CGCCAC CTGAGTTGT GTGGCG TTTTTTTATTTATGC LCK_00429 448326 - 446644 - | thioredoxin reductase TERM 554 446908 - 446937 + g 77 -5.1 -4.91109 | gap 1 AGTTGCTGGTAAAGC CTTGATACGT-GAT TGA AGCTGCGTATCAAG TTTTTGTCCTGGGCC LCK_00430 448906 - 448340 - | peroxiredoxin LCK_00431 449045 - 449440 + | HMG-I and HMG-Y, DNA-binding: regulatory protein, TetR LCK_00432 449424 - 449777 + | hypothetical protein LCK_00433 449855 - 450625 + | dehydrogenase TERM 555 450653 - 450632 - T 95 -6.5 -5.78622 | opp_overlap 450632 TTACGTTAAAAAAAA GAGACCACC TGTT GAGGGTCTC TTTTTTAGTGACGTC TERM 556 450632 - 450653 + T 76 -4.3 -5.15634 | opp_overlap 450632 TTACGTTAAAAAAAA GAGACCACC TGTT GAGGGTCTC TTTTTTAGTGACGTC LCK_00434 452415 - 450673 - | putative MDR permease; transmembrane efflux protein LCK_00435 452561 - 453172 + | transcriptional regulator TERM 557 453158 - 453183 + T 78 -7.7 -4.21194 | opp_overlap 453158 GATGAGACTAAAAAA CCTTTCCAA AAATGAGC TTGGAAAGG TTTTGAATGATGAAA TERM 558 453183 - 453158 - T 90 -8.4 -5.23316 | opp_overlap 453158 GATGAGACTAAAAAA CCTTTCCAAA AATGAG CTTGGAAAGG TTTTGAATGATGAAA LCK_00436 453383 - 453201 - | hypothetical protein LCK_00437 453469 - 454224 + | glycerophosphoryl diester phosphodiesterase miaA 454217 - 455101 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 559 455177 - 455153 - T 79 -5.6 -5.05601 | opp_overlap 455153 CAGCATATATAAAAA GCACTCCGAC AAAAA GTTGGGGTGC TTTTTATTGGTCGCC TERM 560 455153 - 455177 + T 100 -10 -5.1356 | opp_overlap 455153 CAGCATATATAAAAA GCACTCCGAC AAAAA GTTGGGGTGC TTTTTATTGGTCGCC LCK_00439 457274 - 455181 - | NhaP-type Na+:H+ or K+:H+ antiporter TERM 561 457742 - 457765 + G 72 -9 -3.33492 | opp_overlap 457739 457737 GACACTAACAGATAC TATGATGGGT ATTT ATCCATCATA TTATGACATCAATGG TERM 562 458990 - 459009 + G 76 -7.2 -4.1822 | opp_overlap 458984, overlap 458993 459008 CCGCTTAAATATTGG CAATAACG CGCA CGTTGTTG TTTCTTACGATGAGA pepN 457452 - 459986 + | aminopeptidase N TERM 563 459980 - 460027 + F 72 -8 -3.37531 | opp_overlap 459983 459995, overlap 459995 TGCTATTCGCGACAA TATTTAATTAAAAAACAGACTG CTAG CGGTCTGTTTTTTAATGGAGAA TTAATATACTTTTAC TERM 564 460012 - 459995 - f 82 -5.5 -5.28481 | opp_overlap 459980 459995, overlap 459983 TATTTAATTAAAAAA CAGACTG CTAG CGGTCTG TTTTTTAATGGAGAA TERM 565 459995 - 460012 + F 88 -7.7 -5.14563 | opp_overlap 459995 459983, overlap 459980 TATTTAATTAAAAAA CAGACTG CTAG CGGTCTG TTTTTTAATGGAGAA LCK_00441 460176 - 461441 + | major facilitator superfamily permease TERM 566 461494 - 461461 - f 83 -9.7 -3.76492 | opp_overlap 461461, overlap 461451 TTTAACCTTAGGAAA GGCGATTACTTTGTT GACA AGCAAAGTAATCGTC TTTTTTATCTACAAC TERM 567 461461 - 461494 + F 100 -14.1 -5.36441 | opp_overlap 461451 461461 TTTAACCTTAGGAAA GGCGATTACTTTGTT GACA AGCAAAGTAATCGTC TTTTTTATCTACAAC LCK_00442 461602 - 462264 + | hypothetical protein TERM 568 462257 - 462298 + T 84 -11.9 -2.51815 | opp_overlap 462268, overlap 462268 TATTTCTCTCACTCA CAAAATAAAAACACATGAA TGAT TTCATGTGTTTTTATAATG ATATTGATGATTAAC TERM 569 462268 - 462287 + T 100 -9.4 -4.93898 | opp_overlap 462268, overlap 462257 CTCACAAAATAAAAA CACATGAA TGAT TTCATGTG TTTTTATAATGATAT TERM 570 462287 - 462268 - T 100 -9.4 -5.54907 | opp_overlap 462268 462257 CTCACAAAATAAAAA CACATGAA TGAT TTCATGTG TTTTTATAATGATAT LCK_00443 463664 - 462309 - | HD superfamily phosphohydrolase TERM 571 463909 - 463937 + G 82 -3.8 -5.45726 | overlap 463911 TGAATTTAATATCGG TGGCGAGTTACT AATTA AGCAACACGCTA TTTTTTTGCGCTATA LCK_00444 463817 - 464266 + | hypothetical protein rpoE 464292 - 464873 + | DNA-directed RNA polymerase delta subunit TERM 572 464878 - 464907 + F 90 -11.7 -3.87318 | opp_overlap 464878 464876 464875 464885, overlap 464885 TTGAAAAGTAAACCA TAAAAAACACCAT GAAA GTGGTGTTTTTTA TTTGCTGTAATAGTT TERM 573 464907 - 464878 - f 83 -11 -3.10977 | opp_overlap 464878 464885, overlap 464876 464875 464885 TTGAAAAGTAAACCA TAAAAAACACCA TGAAAG TGGTGTTTTTTA TTTGCTGTAATAGTT TERM 574 464900 - 464885 - f 83 -4.7 -5.42265 | opp_overlap 464885 464878, overlap 464878 464876 464875 GTAAACCATAAAAAA CACCA TGAAAG TGGTG TTTTTTATTTGCTGT TERM 575 464885 - 464900 + F 86 -5.4 -5.69793 | opp_overlap 464878 464876 464875 464885, overlap 464878 GTAAACCATAAAAAA CACCAT GAAA GTGGTG TTTTTTATTTGCTGT TERM 576 465151 - 465174 + F 100 -12.6 -5.58179 | opp_overlap 465151 GATATTCCATAAAAA GCAAGTAACT TCAA AGTTACTTGC TTTTTTATTGTAATG TERM 577 465174 - 465151 - f 100 -12.6 -4.8667 | opp_overlap 465151 GATATTCCATAAAAA GCAAGTAACT TCAA AGTTACTTGC TTTTTTATTGTAATG TERM 578 465211 - 465196 - f 80 -4.8 -5.27477 | overlap 465199 ATTGTAATGAAAAAA GTATTT GCAA AAATAC AAAAACCATAGTATT TERM 579 465445 - 465480 + F 100 -22.1 -5.76949 | opp_overlap 465445 TGGTACCGCGCAAAA GCGCCCCTAGAACAT CATAAT ATGTTCTAGGGGCGC TTTTTTTTGACGCTG TERM 580 465480 - 465445 - f 100 -22.1 -4.09685 | opp_overlap 465445 TGGTACCGCGCAAAA GCGCCCCTAGAACAT CATAAT ATGTTCTAGGGGCGC TTTTTTTTGACGCTG LCK_00446 465546 - 466928 + | gamma-aminobutyrate permease plsX 467036 - 468082 + | Fatty acid/phospholipid synthesis protein PlsX LCK_00448 468137 - 468388 + | Acyl carrier protein TERM 581 468410 - 468366 - f 76 -9.6 -2.79312 | gap 1, opp_overlap 468373 468381 468408, overlap 468376 468381 AAACTGTTGACTATA TTGTAACGCATCAAACAACCT AAAA AGGTTGTTTGACAC-TTACTA AACGTTAGTGTATAC TERM 582 468373 - 468404 + F 73 -8.8 -3.16921 | opp_overlap 468366 468376 468381, overlap 468381 TGACTATATTGTAAC GCATCAAACAACCT AAAA AGGTTGTTTGACAC TTACTAAACGTTAGT TERM 583 468401 - 468376 - f 89 -13.5 -2.54523 | opp_overlap 468373 468381, overlap 468366 468381 CTATATTGTAACGCA TCAAACAACCT AAAA AGGTTGTTTGA CACTTACTAAACGTT TERM 584 468381 - 468396 + F 71 -7.6 -3.61764 | opp_overlap 468376 468366 468381, overlap 468373 TTGTAACGCATCAAA CAACCT AAAA AGGTTG TTTGACACTTACTAA TERM 585 468396 - 468381 - f 73 -7.6 -3.794 | opp_overlap 468381 468373, overlap 468376 468366 TTGTAACGCATCAAA CAACCT AAAA AGGTTG TTTGACACTTACTAA TERM 586 468669 - 468714 + F 84 -5.5 -5.55664 | gap 1, opp_overlap 468655, overlap 468675 ACATGGGTGGTACCA CG-CTAAGCGTCCCTGCGTAAA TTT TTTATGCAGGGATGCTTTTTCA TTTTTTTGATAATAA TERM 587 468675 - 468707 + F 100 -17.9 -5.31158 | overlap 468669 GTGGTACCACGCTAA GCGTCCCTGCGTAAA TTT TTTATGCAGGGATGC TTTTTCATTTTTTTG LCK_00449 468755 - 469237 + | GAF domain-containing protein gshR2 469287 - 470630 + | putative glutathione reductase choS 470733 - 472247 + | glycine betaine/carnitine/choline ABC transporter, substrate binding and permease protein LCK_00452 472244 - 472699 + | sprT-like protein LCK_00453 472752 - 473582 + | HAD superfamily hydrolase TERM 588 473624 - 473646 + GF 83 -4.9 -5.28778 | overlap 473626 TACTTGGTCTATTTT CAGCAGTAT TTTTC ATACTGCTA TTTTTTGTGAGTCGT TERM 589 473626 - 473644 + GF 81 -7.5 -4.2748 | overlap 473624 CTTGGTCTATTTTCA GCAGTAT TTTTC ATACTGC TATTTTTTGTGAGTC LCK_00454 473584 - 473784 + | hypothetical protein LCK_00455 473750 - 474520 + | metal-dependent membrane protease TERM 590 474557 - 474512 - T 100 -13.7 -3.55563 | opp_overlap 474515 474524, overlap 474515 474524 ATGGCATTTGTTAAA GCATTATAAAAAGCTATGTCT TGAT AGACATAGCTTTTTATAATTG GTACAGTGATTTAGA TERM 591 474515 - 474554 + T 100 -19.8 -3.17956 | opp_overlap 474512 474515 474524, overlap 474524 GCATTTGTTAAAGCA TTATAAAAAGCTATGTCT TGAT AGACATAGCTTTTTATAA TTGGTACAGTGATTT TERM 592 474554 - 474515 - T 100 -19.8 -2.91144 | opp_overlap 474515 474524, overlap 474512 474524 GCATTTGTTAAAGCA TTATAAAAAGCTATGTCT TGAT AGACATAGCTTTTTATAA TTGGTACAGTGATTT TERM 593 474524 - 474545 + T 100 -11.7 -4.99861 | opp_overlap 474515 474512 474524, overlap 474515 AAAGCATTATAAAAA GCTATGTCT TGAT AGACATAGC TTTTTATAATTGGTA TERM 594 474545 - 474524 - T 100 -11.7 -4.95806 | opp_overlap 474524 474515, overlap 474515 474512 AAAGCATTATAAAAA GCTATGTCT TGAT AGACATAGC TTTTTATAATTGGTA pepQ 475649 - 474549 - | Xaa-Pro aminopeptidase TERM 595 476422 - 476401 - g 70 -5.9 -4.42235 | gap 1, opp_overlap 476406 476407, overlap 476402 476404 AATGGTCAAAAATAA GCACAAGCGC ATC GCACTTGT-C ACTGGTCCTATGACG ccpA 475862 - 476869 + | carbon catabolite control protein TERM 596 476925 - 476947 + F 82 -4.2 -5.45802 | TTAAACGTTAAAAAA GTAAACTATT AAA AGTGGTTTGC TTTTTATTTTGAACA TERM 597 478241 - 478227 - g 78 -4.2 -5.1963 | TCTAATCAACAAAAA GTTGCG CAA CGGAAC GCTAAGGCAGCGCAA LCK_00458 476991 - 478847 + | putative acyltransferase TERM 598 478848 - 478863 + F 91 -4.6 -5.95539 | opp_overlap 478848 AAAAACAGTCATTAA GCTACC GAAA GGTCGC TTTTTTTGTTTGAAA budA 478979 - 479701 + | Alpha-acetolactate decarboxylase TERM 599 479768 - 479756 - g 75 -7.7 -4.07568 | opp_overlap 479756 CCGGTTCGGGGAAAA CGACT GTT AGTCG TGAGTTAGTACGCCG udk 479701 - 480333 + | uridine kinase TERM 600 480377 - 480330 - T 100 -10.8 -5.09259 | opp_overlap 480343, overlap 480333 480335 480337 480343 CATGTTAAAACAAAA TTAGATATTAAAAGCGCTGACA ATAT TGTCAGCGCTTTTAATGTGCAC GCGTTTCTTCGATAG TERM 601 480374 - 480333 - T 100 -14.7 -3.38754 | opp_overlap 480343, overlap 480330 480335 480337 480343 GTTAAAACAAAATTA GATATTAAAAGCGCTGACA ATAT TGTCAGCGCTTTTAATGTG CACGCGTTTCTTCGA TERM 602 480372 - 480335 - T 100 -17.3 -3.24324 | opp_overlap 480343, overlap 480333 480330 480337 480343 TAAAACAAAATTAGA TATTAAAAGCGCTGACA ATAT TGTCAGCGCTTTTAATG TGCACGCGTTTCTTC TERM 603 480370 - 480337 - T 100 -19.9 -3.15231 | opp_overlap 480343, overlap 480335 480333 480330 480343 AAACAAAATTAGATA TTAAAAGCGCTGACA ATAT TGTCAGCGCTTTTAA TGTGCACGCGTTTCT TERM 604 480343 - 480364 + T 100 -14.5 -4.34402 | opp_overlap 480337 480335 480333 480330 480343 AATTAGATATTAAAA GCGCTGACA ATAT TGTCAGCGC TTTTAATGTGCACGC TERM 605 480364 - 480343 - T 100 -14.5 -4.4084 | opp_overlap 480343, overlap 480337 480335 480333 480330 AATTAGATATTAAAA GCGCTGACA ATAT TGTCAGCGC TTTTAATGTGCACGC gntR 481218 - 480367 - | transcriptional regulator TERM 606 481296 - 481286 - H 80 -2.6 -5.64321 | ACAAGAAAAGAAAAA TATT TAC AATA ACAGGGTTGCAATAT gntZ 481376 - 482284 + | 6-phosphogluconate dehydrogenase (decarboxylating) TERM 607 482323 - 482339 + F 100 -9.4 -5.23644 | ATATTTTGAGTAGCA GCTCCC GAGTA GGGAGC TTTTTCTGTTTGGTT TERM 608 483819 - 483838 + G 77 -10.8 -2.79796 | opp_overlap 483819 ACACGTATCAACCAA TGCCTGAA AACT TTCAGGCA TATCGTGAACTGGCA TERM 609 483838 - 483819 - g 80 -10.8 -3.41134 | opp_overlap 483819 ACACGTATCAACCAA TGCCTGAA AACT TTCAGGCA TATCGTGAACTGGCA gntK 482405 - 483934 + | gluconate kinase gntP1 483995 - 485377 + | H+:gluconate symporter TERM 610 485390 - 485405 + F 93 -6.2 -5.7946 | opp_overlap 485390 TAAGTTTTCAGAAAA CAGAAT TTTA ATTCTG TTTTTTTATTGACAG TERM 611 485405 - 485390 - f 72 -6.2 -4.386 | opp_overlap 485390 TAAGTTTTCAGAAAA CAGAAT TTTA ATTCTG TTTTTTTATTGACAG TERM 612 485664 - 485699 + G 83 -9.8 -3.92522 | overlap 485667 CTAAGCATGCAGGTC CAGCGGTAGCAATTTC ATTC GTAATTGCTGCTGTTG TTTCTGGCCTTGCAG TERM 613 485667 - 485696 + G 75 -7.9 -4.08948 | overlap 485664 AGCATGCAGGTCCAG CGGTAGCAATTTC ATTC GTAATTGCTGCTG TTGTTTCTGGCCTTG LCK_00465 485480 - 486907 + | amino acid transporter TERM 614 486921 - 486938 + F 83 -7.7 -4.77165 | opp_overlap 486921 AATAATCACACCGAA GTCCTGT TTAT ACAGGGC TTTTATTGTACAAAA LCK_00466 486976 - 488310 + | 4-aminobutyrate aminotransferase TERM 615 489013 - 489002 - g 73 -2.2 -5.24129 | opp_overlap 489007, overlap 489007 TTTGGCTAGAAAAAA CAGA TTTG CCTG AAGGCCATATCTATG TERM 616 489571 - 489547 - g 90 -8.7 -4.87665 | opp_overlap 489554 TTGCATGGACAAAAA TTAGGTATTCA AGG TGAATTCCTAA CCAAGTTAGTCCCAA TERM 617 491042 - 491063 + G 73 -7.3 -4.07618 | TATTAGTGTTGGCAA CTCACGTTG ATGA CAAAGTGAG TTTAATTGTTGCAGC alaS 488572 - 491256 + | alanyl-tRNA synthetase LCK_00468 491363 - 491614 + | hypothetical protein TERM 618 491870 - 491858 - g 70 -7.7 -3.61774 | opp_overlap 491857 491858 GACAATATGCGCAAA TGGTC GAA GACCA ATTTAACTTGCCAAC LCK_00469 491614 - 492045 + | endonuclease TERM 619 492081 - 492047 - f 83 -10.3 -3.30418 | opp_overlap 492053, overlap 492053 CACTCACTAAATAGA TGAAAACAACATTTC GCACA GAAATGTTGTTTTTA CGTTATAATATAGAT TERM 620 492053 - 492075 + F 100 -9.3 -4.78752 | opp_overlap 492047 492053 CTAAATAGATGAAAA CAACATTTC GCACA GAAATGTTG TTTTTACGTTATAAT TERM 621 492075 - 492053 - f 93 -9.3 -4.46493 | opp_overlap 492053, overlap 492047 CTAAATAGATGAAAA CAACATTTC GCACA GAAATGTTG TTTTTACGTTATAAT LCK_00470 492149 - 492445 + | hypothetical protein cydA 492627 - 494099 + | cytochrome bd-type quinol oxidase, subunit 1 cydB 494099 - 495112 + | cytochrome d ubiquinol oxidase, subunit II TERM 622 495125 - 495144 + F 91 -4.3 -5.79595 | opp_overlap 495116 495125 TAAAACGGCAAAAAA CGTTTAC AATTAA GTAGACG TTTTTTGTTTTAAAA TERM 623 495359 - 495381 + G 84 -7.8 -4.79352 | opp_overlap 495354 495351 495359 AGTCAAACGACATCA GCAATTGC TTTTTTT GCAATTGC TTTTGTTGTACGTCA TERM 624 495951 - 495962 + G 79 -3.6 -5.49809 | CAACGCTCTCTATTG CGGT TGTT GCCG TTTTTTTAGGATTTG cydC 495194 - 496921 + | ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components cydD 496918 - 498642 + | ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components LCK_00475 498643 - 499272 + | N-acetyl muramidase TERM 625 499294 - 499270 - f 95 -8.7 -4.9218 | opp_overlap 499276, overlap 499276 GATGTACCACAAAAA TAAAAACGGAA ATG TTCCGTTTTTT TTATTTTCTCTAATA TERM 626 499288 - 499276 - f 93 -7.7 -5.69262 | opp_overlap 499276, overlap 499270 CCACAAAAATAAAAA CGGAA ATG TTCCG TTTTTTTTATTTTCT TERM 627 499276 - 499288 + F 100 -7.7 -6.37666 | opp_overlap 499276 499270 CCACAAAAATAAAAA CGGAA ATG TTCCG TTTTTTTTATTTTCT pcrA 499375 - 501624 + | ATP-dependent DNA helicase PcrA TERM 628 503487 - 503499 + G 74 -4.1 -5.00895 | overlap 503484 ATCTGATGTCATCGT TGATG AAA CGTCA TTTTTCTATGGTAAA ligA 501697 - 503742 + | DNA ligase, NAD-dependent LCK_00478 503739 - 504881 + | sex pheromone biosynthesis protein TERM 629 504882 - 504898 + F 93 -7.3 -5.4492 | opp_overlap 504882 ACAGTATTAAATTAA GCATAGT CTA GCTATGC TTTTTTGTATATATA TERM 630 505947 - 505928 - g 75 -9.4 -3.40073 | ATCTTGAGCAACTAA TGCAACAA CACA TTGTTGCA GCTCGACACCGTCTC xseA 504937 - 506223 + | exodeoxyribonuclease VII, large subunit xseB 506216 - 506440 + | exodeoxyribonuclease VII, small subunit TERM 631 506754 - 506782 + G 76 -7.5 -4.21974 | opp_overlap 506757, overlap 506757 CATGCTAAATTTGGA GAATCATCAGCTA TTT TAGTTGGTGATGC TTTGTTAACTGGTGC ispA 506433 - 507347 + | geranylgeranyl pyrophosphate synthase LCK_00482 507344 - 508186 + | hemolysin A argR 508176 - 508634 + | arginine repressor recN 508650 - 510347 + | DNA repair protein RecN TERM 632 510400 - 510373 - T 100 -15.8 -4.99435 | opp_overlap 510373 TCTAATAACTAAAAA GACTGAACTCAT TCAT ATGAGTTCAGTC TTTTTAATATCTAAA TERM 633 510373 - 510400 + T 100 -15.8 -4.84527 | opp_overlap 510373 TCTAATAACTAAAAA GACTGAACTCAT TCAT ATGAGTTCAGTC TTTTTAATATCTAAA LCK_00485 511725 - 510418 - | putative permease pgm 512021 - 512701 + | phosphoglycerate mutase LCK_00487 512728 - 513804 + | cellulase M TERM 634 514382 - 514394 + G 80 -10.5 -3.72765 | TTATTGCTGCTGTTG CCGCC CTT GGCGG TTTAGGATTTGGCTT ftsW 513811 - 514995 + | integral membrane cell division protein, FtsW TERM 635 515012 - 515024 + G 74 -9.1 -3.48884 | opp_overlap 515011 515010, overlap 515010 ATTTGCAATACAACC CAGGC GGG GCCTG TATATTTATTTAAAG TERM 636 515201 - 515218 + G 79 -9.9 -3.70149 | TGTCTCATCACCGCG TCCGGAT ATTA ATCCGGA TTTGGATGATATGCA LCK_00489 514992 - 515279 + | hypothetical protein LCK_00490 515294 - 515869 + | N6-adenine-specific methylase coaD 515886 - 516362 + | phosphopantetheine adenylyltransferase TERM 637 516384 - 516401 + G 80 -4.7 -5.22006 | opp_overlap 516384 516385, overlap 516386 AAAAAAGTAAAATTA TTGCCGC AATT GCGGCTG TTTTTGTTGTCATAG TERM 638 516386 - 516399 + G 89 -9.5 -4.2328 | opp_overlap 516385 516384, overlap 516384 AAAAGTAAAATTATT GCCGC AATT GCGGC TGTTTTTGTTGTCAT LCK_00492 516362 - 517444 + | protease TERM 639 517446 - 517487 + T 100 -23.5 -3.39327 | opp_overlap 517446 517457, overlap 517457 AAACTGTTAACTAAA GTTATAAAAAAGGATTGCC CTTA GGCAATCCTTTTTTATAAC TTATCAATATAGAGG TERM 640 517487 - 517446 - T 100 -23.5 -3.922 | opp_overlap 517446 517457, overlap 517457 AAACTGTTAACTAAA GTTATAAAAAAGGATTGCC CTTA GGCAATCCTTTTTTATAAC TTATCAATATAGAGG TERM 641 517457 - 517476 + T 100 -12.2 -5.3236 | opp_overlap 517446 517457, overlap 517446 TAAAGTTATAAAAAA GGATTGCC CTTA GGCAATCC TTTTTTATAACTTAT TERM 642 517476 - 517457 - T 100 -12.2 -5.33866 | opp_overlap 517457 517446, overlap 517446 TAAAGTTATAAAAAA GGATTGCC CTTA GGCAATCC TTTTTTATAACTTAT LCK_00493 518170 - 517481 - | hypothetical protein nadE 519032 - 518205 - | NAD synthase TERM 643 518756 - 518734 - G 76 -7 -4.36914 | opp_overlap 518734 TTTGGTTCGATAAAA GCTAACGC TGCTTGT GCGTCAGC TTCGTCACGTTGTGC nadC 520383 - 519034 - | nicotinic acid phosphoribosyltransferase TERM 644 519317 - 519335 + g 73 -2.4 -5.19212 | overlap 519319 GTTCGCCAAATTTGC TTTTTACC GGG GGTAGATA TTTTTTCGTCATCAT TERM 645 520276 - 520256 - G 90 -11.3 -4.12902 | TAACCATTGTTAAAA GGCTTATTT CTA AAATAAGCC TCGAAAACAACCGGC LCK_00496 520456 - 520905 + | ATPase or kinase TERM 646 520956 - 520980 + G 83 -10.7 -3.63569 | opp_overlap 520947 520956 520953 520952 GAAGTAGCAAACTTA GCGCTTGCC CCACAAT GGCAGGCGC TTATTCAACAATTGA LCK_00497 520902 - 521405 + | histone acetyltransferase HPA2 dnaQ 521407 - 521940 + | DNA polymerase III, epsilon subunit TERM 647 521975 - 521934 - T 100 -20.5 -4.56775 | opp_overlap 521934, overlap 521920 521938 ACGTTTTGTCAAAAA CAAATAACGCATTGCACGA ATTA TAGTGCAATGCGTTATTTG TTTTTACTTATTTAT TERM 648 521934 - 521975 + T 100 -20.5 -5.05712 | opp_overlap 521920 521934 521938 ACGTTTTGTCAAAAA CAAATAACGCATTGCACGA ATTA TAGTGCAATGCGTTATTTG TTTTTACTTATTTAT TERM 649 521971 - 521938 - T 100 -15.5 -4.85782 | opp_overlap 521934, overlap 521934 TTTGTCAAAAACAAA TAACGCATTGCACGA ATTA TAGTGCAATGCGTTA TTTGTTTTTACTTAT xth 522803 - 521979 - | exodeoxyribonuclease III LCK_00500 523653 - 522820 - | sugar kinase LCK_00501 523869 - 523708 - | hypothetical protein TERM 650 524615 - 524625 + G 73 -5.4 -4.57569 | overlap 524604 524622 GAAGTGGAGCCTGCC CCAA TCT TTGG TTTTTCACCAGATGC LCK_00502 524105 - 525520 + | acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase TERM 651 525553 - 525527 - f 100 -12.4 -5.14163 | opp_overlap 525527 ATTGATTAATAAAAA GTGATGGTGC TAATTGG GCACCATCAC TTTTTTGCTAAGTTA TERM 652 525527 - 525553 + F 100 -13.1 -5.18357 | opp_overlap 525527 ATTGATTAATAAAAA GTGATGGTGCT AATTG GGCACCATCAC TTTTTTGCTAAGTTA nadR 525848 - 526999 + | ATPase/kinase involved in NAD metabolism TERM 653 526987 - 527030 + F 95 -6.4 -5.80817 | opp_overlap 526986, overlap 526986 TACTGGGTTCAATAT TAAACACATTTAATTTGT AAAAAAGC ATACATTAAATGTGTTTA TTTTTTTATATTAAA LCK_00504 527132 - 527908 + | dehydrogenase TERM 654 527937 - 527954 + F 79 -4.1 -5.23316 | TAGAACACGAACGAA CGTTTGC CGAG GTGAACG TTTTTTGCTATCATA LCK_00505 528004 - 529347 + | purine-cytosine transport protein TERM 655 529626 - 529642 + G 78 -10.9 -3.01712 | GATATTGTGTTGCCA GCTGCTT ATG AAGCAGC TGTTGAAGAAGCCGG tig 529404 - 530699 + | trigger factor TERM 656 530686 - 530731 + F 100 -20.1 -3.2247 | opp_overlap 530674 530690 530697, overlap 530697 AGATTACTGACTCAG CAAAGGCAAAATAAAAAGGCC GTCA GGCTTTTTTATTTTGCCTCTG TTAATCACTATATTT TERM 657 530727 - 530690 - f 100 -17.3 -3.767 | opp_overlap 530686 530697, overlap 530697 TACTGACTCAGCAAA GGCAAAATAAAAAGGCC GTCA GGCTTTTTTATTTTGCC TCTGTTAATCACTAT TERM 658 530697 - 530720 + F 89 -9 -4.28375 | opp_overlap 530690 530697, overlap 530686 TCAGCAAAGGCAAAA TAAAAAGGCC GTCA GGCTTTTTTA TTTTGCCTCTGTTAA TERM 659 530720 - 530697 - f 74 -6.8 -4.37711 | opp_overlap 530697 530686, overlap 530690 TCAGCAAAGGCAAAA TAAAAAGGCC GTCA GGCTTTTTTA TTTTGCCTCTGTTAA TERM 660 531494 - 531479 - g 70 -2.6 -5.08011 | gap 1, opp_overlap 531479 531489 AAAATTGCTAAAAAA TCTGAGA ATG TCTC-GA TTACTCGCGATGTTT clpX 530906 - 532153 + | ATP-dependent Clp protease, ATP-binding subunit ClpX LCK_00508 532158 - 532742 + | GTPase TERM 661 532745 - 532758 + F 89 -6.7 -5.66868 | opp_overlap 532745 532744 TGCACATATGTAAAG CCAAC ACTT GTTGG TTTTTTTAATTGCTT TERM 662 533293 - 533279 - g 73 -5.6 -4.65666 | ACATTGAAAAAATAA CACGAC TCA GACGTG CAGGGAAAATTGAAG TERM 663 533445 - 533425 - g 81 -2.5 -5.59564 | opp_overlap 533428, overlap 533428 ACAAATGCAAAAAAA CAACGGCAA TTA TTGACGTTT ATTTTAGGTCATATG TERM 664 533442 - 533428 - g 71 -4.2 -4.83715 | opp_overlap 533428, overlap 533425 AATGCAAAAAAACAA CGGCAA TTA TTGACG TTTATTTTAGGTCAT priA 532813 - 535233 + | primosomal protein N' fmt 535408 - 536379 + | methionyl-tRNA formyltransferase sun 536369 - 537721 + | putative rRNA methylase TERM 665 538226 - 538208 - g 73 -2.3 -5.22794 | overlap 538209 538210 ACAATTACCAAAAAA GCGGCAG AGGAA CTGCCAA ATGGTGATAGTGTCA LCK_00512 537752 - 538498 + | Serine/threonine protein phosphatase TERM 666 539622 - 539593 - g 100 -15.9 -3.59627 | gap 1, opp_overlap 539602, overlap 539594 539602 ATTAAATTTCGTAAA GCGCCAAAATGGCC GTG GGCCATTTTGG-GC GTAGTCATCTTGGGC TERM 667 539623 - 539594 - g 100 -15.9 -2.75294 | gap 1, opp_overlap 539602, overlap 539593 539602 TTAAATTTCGTAAAG CGC-CAAAATGGCC GTG GGCCATTTTGGGCG TAGTCATCTTGGGCA TERM 668 539614 - 539602 - g 85 -9.1 -4.17089 | opp_overlap 539602, overlap 539593 539594 CGTAAAGCGCCAAAA TGGCC GTG GGCCA TTTTGGGCGTAGTCA TERM 669 539602 - 539614 + G 83 -9.1 -4.12188 | opp_overlap 539602 539593 539594 CGTAAAGCGCCAAAA TGGCC GTG GGCCA TTTTGGGCGTAGTCA pkn 538501 - 540393 + | Serine/threonine protein kinase TERM 670 540410 - 540425 + F 91 -5.4 -5.80364 | opp_overlap 540410 ATATCGTTAATGAAA GTCGAT TAAT ATCGGC TTTTTTTGTTACAAT TERM 671 540467 - 540481 + G 73 -7.8 -3.87104 | overlap 540468 AAAAGGACGCATTAT TCGCTC GTT GAGCGG TTATTATGATATAGA LCK_00514 540447 - 541352 + | GTPase rpe 541369 - 542025 + | ribulose-phosphate 3-epimerase LCK_00516 542025 - 542663 + | putative thiamin pyrophosphokinase trx1 542710 - 543024 + | thioredoxin rpmB 543113 - 543313 + | ribosomal protein L28 TERM 672 543374 - 543388 + F 100 -7.1 -5.80817 | opp_overlap 543374 543372, overlap 543366 GTTGACATAAAACGA CCACC TTACT GGTGG TTTTTTTATGTTAAA TERM 673 543435 - 543466 + F 72 -6 -4.30441 | opp_overlap 543434 543433 543438 543441 TTTAAGGAGGAAATG CAATAATACACTAA ATAG TCAGCGTATTATTG TTTTGAATATTATGG TERM 674 543535 - 543525 - g 70 -5.4 -4.33151 | overlap 543528 CATTACAATTGAAAA CGAT GTT ATCG CAACAATAGTTGGTG LCK_00519 543478 - 543837 + | putative general stress protein LCK_00520 543845 - 545542 + | kinase TERM 675 545602 - 545544 - T 100 -25 -4.1822 | opp_overlap 545560, overlap 545545 545560 TTTCAGTTGAATAAA TGAAACATGACAAAAAGGAAGTCGCAGA TCA TCTGCGACTTCCTTTTTGTCATGTTATT AGAACCAGCCTAATG TERM 676 545601 - 545545 - T 100 -28.5 -3.10611 | opp_overlap 545560, overlap 545544 545560 TTCAGTTGAATAAAT GAAACATGACAAAAAGGAAGTCGCAGA TCA TCTGCGACTTCCTTTTTGTCATGTTAT TAGAACCAGCCTAAT TERM 677 545586 - 545560 - T 100 -19.6 -5.00846 | opp_overlap 545560, overlap 545545 545544 GAAACATGACAAAAA GGAAGTCGCAGA TCA TCTGCGACTTCC TTTTTGTCATGTTAT TERM 678 545560 - 545586 + T 100 -19.6 -4.9934 | opp_overlap 545560 545545 545544 GAAACATGACAAAAA GGAAGTCGCAGA TCA TCTGCGACTTCC TTTTTGTCATGTTAT LCK_00521 545807 - 545601 - | hypothetical protein LCK_00522 545966 - 546310 + | hypothetical protein TERM 679 546353 - 546327 - f 100 -16.8 -4.87665 | opp_overlap 546327 CCCCACTTATAAAAA GCACTGTTATCT ATT AGATAACAGTGC TTTTTAGTGTCTTGA TERM 680 546327 - 546353 + F 100 -16.8 -4.87807 | opp_overlap 546327 CCCCACTTATAAAAA GCACTGTTATCT ATT AGATAACAGTGC TTTTTAGTGTCTTGA LCK_00523 546464 - 546895 + | MraZ protein TERM 681 547727 - 547695 - g 70 -3.4 -5.00616 | gap 1, overlap 547698 TGTTTCGGGAAAAAA CAAGTATGCCTGACT TGCC AG-CAGGCTTACCAG TATTGCCCGGGCAAT TERM 682 547724 - 547698 - g 73 -5.9 -4.61482 | gap 1, overlap 547695 TTCGGGAAAAAACAA GTATGCCTGACT TGCC AG-CAGGCTTAC CAGTATTGCCCGGGC mraW 546914 - 547855 + | S-adenosyl-methyltransferase MraW ftsL 547873 - 548229 + | protein required for the initiation of cell division TERM 683 548295 - 548279 - g 73 -2.2 -5.30686 | opp_overlap 548279, overlap 548280 AAGAGTCACAAAAAA TGCCAA GATTT TTGGCG GTGTATTGTTGGGTG LCK_00526 548232 - 550412 + | cell division protein FtsI/penicillin-binding protein mraY 550423 - 551385 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 551437 - 552786 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 684 553206 - 553184 - g 75 -5.6 -4.67607 | GGTGTAACAAATAAA TTTTTAGCAC GTG GTGCCACAAA AATCGGTGTGGCCTT murG 552788 - 553897 + | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase ftsQ 553932 - 554639 + | cell division septal protein ftsA 554767 - 556140 + | cell division protein FtsA TERM 685 556445 - 556414 - g 75 -9.5 -3.36919 | opp_overlap 556418 556435, overlap 556418 ACAAAAGCCGCAGAA GAAAGTGCCGAAG ATATTG CCTCTGCACTTTC AGGCGCAGATATGGT ftsZ 556162 - 557475 + | cell division protein FtsZ LCK_00533 557595 - 558065 + | cell division protein LCK_00534 558070 - 558333 + | integral membrane protein LCK_00535 558341 - 559132 + | cell division protein divIVA 559169 - 559849 + | cell division initiation protein TERM 686 560049 - 560078 + F 100 -22.3 -6.12458 | TGGTACCACGCGTAA GCGTCCCTGTGTC GATT GACACAGGGACGC TTTTTTATTTTTTTG TERM 687 561359 - 561346 - g 72 -4.5 -4.72272 | opp_overlap 561331 TTGGCGTACCAAAAA GCCAA TTAT CTGGC GTGCAGTGCCACAAT TERM 688 561637 - 561608 - g 73 -5.8 -4.62783 | gap 1, overlap 561610 GATTTATTTGAAAAA CACG-GTTCAAAC TATTG GTTTGAACACGAG GCTAAAGATTTATTG ileS 560135 - 562927 + | isoleucyl-tRNA synthetase TERM 689 562936 - 562964 + F 100 -11.9 -5.96894 | opp_overlap 562939 TGAATAATTTCGACA CAACGCAATAACA TGG TATTATTGCGTTG TTTTTTTATTTAAAT TERM 690 562961 - 562939 - f 81 -10 -3.50715 | opp_overlap 562936 ATAATTTCGACACAA CGCAATAACA TGG TATTATTGCG TTGTTTTTTTATTTA pts23B 563061 - 563381 + | cellobiose PTS, EIIB LCK_00539 563383 - 563703 + | cellobiose PTS, EIIA TERM 691 563738 - 563749 + F 78 -2.2 -5.68023 | TTACCACTTTATTTC TGGT AAGC GCCA TTTTTTTCGTTCTCA LCK_00540 563848 - 564462 + | hypothetical protein TERM 692 564490 - 564468 - f 100 -12.1 -5.43866 | opp_overlap 564468 TAAGGGGTAAAAAAA GCGACTAGA GCGTG TCTAGTCGC TTTTCTAATGCACTA TERM 693 564468 - 564490 + F 100 -12.1 -4.46926 | opp_overlap 564468 TAAGGGGTAAAAAAA GCGACTAGA GCGTG TCTAGTCGC TTTTCTAATGCACTA TERM 694 564797 - 564825 + F 100 -16.9 -5.86976 | opp_overlap 564797, overlap 564787 GATTTTCATGCAAAA GGCATGCTGCTTA ACT TAAGCAGTATGCC TTTTTTATTTTCTAA TERM 695 564825 - 564797 - f 100 -14.7 -4.18494 | opp_overlap 564787 564797 GATTTTCATGCAAAA GGCATGCTGCTTA ACT TAAGCAGTATGCC TTTTTTATTTTCTAA TERM 696 565092 - 565074 - g 78 -11 -2.9914 | CATGTTTCATACAGA TGCGCCAC TTT ATGGCGCA CAGGTTGCCAGTCGT LCK_00541 564856 - 565659 + | 2-keto-4-pentenoate hydratase TERM 697 566789 - 566811 + G 74 -4 -5.13521 | overlap 566799 GTTTACCGAAGTGTT GTTGGCTTCG TGG CTATGCCAGC TTTTTTAGATGCTTT brnQ 565652 - 567016 + | branched chain amino acid ABC transporter carrier protein upp 567147 - 567758 + | Uracil phosphoribosyltransferase TERM 698 567763 - 567783 + F 100 -11.3 -5.252 | opp_overlap 567763 GTACGATGTAAAAAA GATAACACA GCT TGTGTTATC TTTTTTATGAGAATA TERM 699 567783 - 567763 - f 100 -11.3 -5.1101 | opp_overlap 567763 GTACGATGTAAAAAA GATAACACA GCT TGTGTTATC TTTTTTATGAGAATA TERM 700 568038 - 568073 + F 100 -17.8 -4.053 | opp_overlap 568043, overlap 568043 TTAGGAAAAATACGT GAAAACGTCCTAACGA GCAA TCGTTGGGGCGTTTTC TTTGTCTCCAATGAT TERM 701 568043 - 568068 + F 100 -11.9 -5.05113 | opp_overlap 568043, overlap 568038 AAAAATACGTGAAAA CGTCCTAACGA GCAA TCGTTGGGGCG TTTTCTTTGTCTCCA TERM 702 568068 - 568043 - f 78 -7.5 -4.24338 | opp_overlap 568043 568038 AAAAATACGTGAAAA CGTCCTAACGA GCAA TCGTTGGGGCG TTTTCTTTGTCTCCA LCK_00544 568130 - 569272 + | integral membrane protein livA 569301 - 570473 + | ABC-type branched-chain amino acid transport system, periplasmic component TERM 703 570465 - 570451 - f 79 -10 -3.2856 | opp_overlap 570451, overlap 570449 570447 CAAATGGGAAAGATA CCACAG CTA CTGTGG TTAAATAAAGGTAAG TERM 704 570451 - 570465 + F 77 -10 -3.06183 | opp_overlap 570451 570449 570447 CAAATGGGAAAGATA CCACAG CTA CTGTGG TTAAATAAAGGTAAG TERM 705 570855 - 570842 - g 73 -2.4 -5.24129 | GGCTCTGACAAAAAA GCTT TTCCAC AAGC AATTCGTACTATCCA livB 570485 - 571363 + | branched chain amino acid ABC transporter permease livC 571368 - 572348 + | ABC-type branched-chain amino acid transport system, permease component livG 572314 - 573099 + | ABC-type branched-chain amino acid transport systems, ATPase component livF 573096 - 573824 + | ABC-type branched-chain amino acid transport systems, ATPase component TERM 706 574140 - 574173 + F 100 -16.2 -5.02074 | opp_overlap 574132 CCACGAATCATCATC GTCCCGCAGTCTAA TGATAT TTAGATTGCGGGAC TTTTTTGAGCAATGA TERM 707 574462 - 574474 + G 76 -3.3 -5.25803 | GCAGCAGTTAATTGG TCCAG CGA CAGGA TTTTTTGTAGCGATT LCK_00550 574214 - 575626 + | amino acid ABC transporter LCK_00551 575613 - 576524 + | homocysteine S-methyltransferase TERM 708 576549 - 576579 + T 100 -19.2 -4.7078 | opp_overlap 576549 CATGTTGCGTAAAAA GGCCTGAAAAGAGT CAC GCTCTTTTCAGGCC TTTTTACGTCGTTAA TERM 709 576579 - 576549 - T 100 -18.5 -4.57073 | opp_overlap 576549 CATGTTGCGTAAAAA GGCCTGAAAAGAG TCACG CTCTTTTCAGGCC TTTTTACGTCGTTAA LCK_00552 577158 - 576619 - | hypothetical protein ung 577201 - 577860 + | Uracil-DNA glycosylase pta 577967 - 578959 + | phosphate acetyltransferase TERM 710 579007 - 578961 - T 100 -16.3 -3.99592 | opp_overlap 578975, overlap 578964 578975 AGGCATTAGTATAAA GCACAAATAAAAAACACTGAG ATTCG CTCAGTGTTTTTTATTTGTAA TCAACAGCGCAGGGT TERM 711 579004 - 578964 - T 100 -20.2 -3.04836 | opp_overlap 578975, overlap 578961 578975 CATTAGTATAAAGCA CAAATAAAAAACACTGAG ATTCG CTCAGTGTTTTTTATTTG TAATCAACAGCGCAG TERM 712 578993 - 578975 - T 95 -8.9 -5.73978 | opp_overlap 578975, overlap 578964 578961 AGCACAAATAAAAAA CACTGAG ATTCG CTCAGTG TTTTTTATTTGTAAT TERM 713 578975 - 578993 + T 95 -8.9 -5.73978 | opp_overlap 578975 578964 578961 AGCACAAATAAAAAA CACTGAG ATTCG CTCAGTG TTTTTTATTTGTAAT LCK_00555 579254 - 578988 - | hypothetical protein TERM 714 579089 - 579077 - G 70 -9.1 -3.23447 | opp_overlap 579076 579077, overlap 579075 GTAATTCTGATAAGA GACGC TTA GCGTC ATTATCAGACAATTC LCK_00556 581034 - 579238 - | ABC-type multidrug transport system, ATPase and permease components TERM 715 580714 - 580748 + g 70 -8.8 -3.30124 | opp_overlap 580717, overlap 580717 AATGGCGCGTTGTGA TAACATTTGCATCA TATAAGT TGAGGCAAATGTTA TTATGCCAAGTAAAA TERM 716 580960 - 580949 - G 72 -4.4 -4.67608 | GACCCGAATACAAAA CGAA TCAT TTCG CTAGTTGTGGTGTCA TERM 717 581332 - 581309 - H 100 -12.5 -4.83615 | opp_overlap 581309 TATTTCTTATAAAAA GGCAGCTTG ATTTAA CAAGCTGCC TTTTTATAATGATGC TERM 718 581309 - 581332 + H 100 -12.5 -4.93296 | opp_overlap 581309 TATTTCTTATAAAAA GGCAGCTTG ATTTAA CAAGCTGCC TTTTTATAATGATGC serC 581680 - 582771 + | phosphoserine transaminase LCK_00558 582768 - 583946 + | D-isomer specific 2-hydroxyacid dehydrogenase family protein LCK_00559 583955 - 584443 + | phosphatidylglycerophosphatase A LCK_00560 584567 - 585289 + | hypothetical protein TERM 719 585327 - 585304 - T 100 -12.6 -4.9725 | opp_overlap 585304 ATTCGTATATAAAAA GCACTATCTT AATC AAGATAGTGC TTTTTATTATGACCG TERM 720 585304 - 585327 + T 100 -12.6 -5.18726 | opp_overlap 585304 ATTCGTATATAAAAA GCACTATCTT AATC AAGATAGTGC TTTTTATTATGACCG LCK_00561 585786 - 585334 - | flavodoxin TERM 721 585885 - 585874 - H 71 -3 -5.11613 | opp_overlap 585874 585878, overlap 585878 AGATGACTTAAAAAA GTAT CATC ATAC TTCGTGAAACAAAAC LCK_00562 586038 - 586757 + | MIP family facilitator protein TERM 722 586749 - 586764 + F 95 -9 -5.29846 | TCAAAATATTATCTA GGTCTC TAGT GAGACC TTTTTATTTACAATT LCK_00563 586861 - 586983 + | hypothetical protein TERM 723 587247 - 587216 - f 100 -17.4 -3.58343 | opp_overlap 587216 GGTACCACGGTGAAA CGTCCCTTTGAGTC GCAT GACTCAAGGGGACG TTTTTGTTTTTATAA TERM 724 587216 - 587247 + F 100 -19.6 -5.69262 | opp_overlap 587216 GGTACCACGGTGAAA CGTCCCTTTGAGTC GCAT GACTCAAGGGGACG TTTTTGTTTTTATAA thrS 587317 - 589278 + | threonyl-tRNA synthetase TERM 725 589295 - 589320 + F 76 -7.7 -3.94409 | gap 1, opp_overlap 589295 TAATTGATTTGTAAA GCATTGAAC-AC AAA GTCGTTCAGTGC TTTGTACATAGTGTG TERM 726 589864 - 589874 + G 71 -6.8 -4.00868 | ATGATCAAAATTGTT GCCA TAC TGGC TTTGATTGTGACTGG TERM 727 590379 - 590369 - g 75 -5.4 -4.83169 | AGCCTTTTAGAAAAA TGTC TAA GACA CAATTACCAACCAAT LCK_00565 589375 - 590748 + | gamma-aminobutyrate permease TERM 728 590807 - 590749 - f 77 -6 -4.80853 | gap 3, opp_overlap 590758 590763, overlap 590758 590763 ACGTTAAAAAAATAA TCTTTAAT--ATAAAAGCTATTCAATCTA AATT TAGATTGAATAGCTTTTATTGATT-ATGA TAAACTAGAGGCATT TERM 729 590797 - 590758 - f 100 -19.8 -3.08349 | opp_overlap 590758 590763, overlap 590749 590763 AAATAATCTTTAATA TAAAAGCTATTCAATCTA AATT TAGATTGAATAGCTTTTA TTGATTATGATAAAC TERM 730 590758 - 590797 + F 100 -19.8 -3.47322 | opp_overlap 590758 590749 590763, overlap 590763 AAATAATCTTTAATA TAAAAGCTATTCAATCTA AATT TAGATTGAATAGCTTTTA TTGATTATGATAAAC TERM 731 590792 - 590763 - f 100 -15.3 -4.66938 | opp_overlap 590758 590763, overlap 590758 590749 ATCTTTAATATAAAA GCTATTCAATCTA AATT TAGATTGAATAGC TTTTATTGATTATGA TERM 732 590763 - 590792 + F 100 -15.3 -4.81852 | opp_overlap 590763 590758 590749, overlap 590758 ATCTTTAATATAAAA GCTATTCAATCTA AATT TAGATTGAATAGC TTTTATTGATTATGA LCK_00566 590845 - 591480 + | hypothetical protein TERM 733 591599 - 591626 + F 88 -7.1 -4.95167 | ATTGCAAGTGTTGAA GTGGGTAAAGA TTAGGT TCTTTGTCCAC TTTTCTTCTTGATTC infC 591759 - 592190 + | translation initiation factor 3 TERM 734 592184 - 592209 + F 77 -8.5 -3.57561 | overlap 592166 592187 GGCACCTAAAGACGC CAAGTAATTAA AGGT TTAATTGCTTG TTTACAAGCTTAAAC rpmI 592253 - 592450 + | ribosomal protein L35 TERM 735 592584 - 592611 + G 71 -9.8 -2.85583 | overlap 592581 GTAAAAAGATGGTTA AGTTGGCCAAGG GTTA CCGTGGCCAACG TCGTATTAATTTTAA TERM 736 592881 - 592865 - g 73 -9.5 -3.14463 | AAGTTGGCTGACCAA GCTAAAG CAG CTTTAGC ATCAGACAACGTATT rplT 592532 - 592951 + | ribosomal protein L20 TERM 737 592987 - 592959 - T 83 -11.1 -2.96712 | opp_overlap 592964, overlap 592964 ACCGTTAAGAATAAT CAAAAGTGTGGCA TGA CGCCACACTTTTT TATTTACTATAAACA TERM 738 592964 - 592982 + T 100 -10.3 -5.69793 | opp_overlap 592964 592959 TAAGAATAATCAAAA GTGTGGC ATGAC GCCACAC TTTTTTATTTACTAT TERM 739 592982 - 592964 - T 100 -11 -4.61824 | opp_overlap 592964, overlap 592959 TAAGAATAATCAAAA GTGTGGCA TGA CGCCACAC TTTTTTATTTACTAT TERM 740 593015 - 593032 + T 89 -7 -5.31545 | opp_overlap 593015, overlap 593008 ACACAGCAAAAAAAA TAGCCC TTAACT GGGCTA TTTTTTAGTGTTATT TERM 741 593032 - 593015 - T 100 -7 -5.92337 | opp_overlap 593008 593015 ACACAGCAAAAAAAA TAGCCC TTAACT GGGCTA TTTTTTAGTGTTATT LCK_00570 593684 - 593043 - | hypothetical protein TERM 742 593071 - 593088 + g 75 -2.7 -5.18726 | opp_overlap 593071 593074 GATTGTACTTTATAA TTAGCAA CCAA TTGCAAA TTTTTGTTATCGCCA TERM 743 593484 - 593516 + g 74 -6.3 -4.37211 | overlap 593482 593489 593491 CACAGGCGCATTGGA GCTAGTAGCACTAGT TGA ACTAGTGCTGTTTGA TTTGTTCTGGCTTTG TERM 744 593489 - 593511 + g 93 -11.4 -4.24422 | overlap 593482 593484 593491 GCGCATTGGAGCTAG TAGCACTAGT TGA ACTAGTGCTG TTTGATTTGTTCTGG TERM 745 593491 - 593509 + g 89 -11.8 -3.70585 | overlap 593482 593489 593484 GCATTGGAGCTAGTA GCACTAGT TGA ACTAGTGC TGTTTGATTTGTTCT TERM 746 593710 - 593694 - H 70 -8 -3.2891 | opp_overlap 593694, overlap 593693 CTGCATAATTAAAAT CAGGAC GCATT GTCCTG TTCCTTTCCTTAGAT TERM 747 593694 - 593710 + H 77 -8.7 -3.6187 | opp_overlap 593694 593693 CTGCATAATTAAAAT CAGGACG CAT TGTCCTG TTCCTTTCCTTAGAT LCK_00571 593888 - 595705 + | metallo-beta-lactamase superfamily hydrolase LCK_00572 595776 - 596705 + | Type I site-specific restriction-modification system, R (restriction) subunit TERM 748 597054 - 597043 - g 73 -5.8 -4.63592 | CCTGAAGAAAAAGAA CGTG GTAT CACG ATTAACACTTCACAC tuf 596869 - 598056 + | translation elongation factor Tu TERM 749 598082 - 598069 - f 81 -8.1 -4.12902 | opp_overlap 598069 598081 TAATTATTTTGAAAA CACGC TTAC GCGTG TTTTTTTGTTAAAAA TERM 750 598069 - 598082 + F 100 -8.1 -5.7946 | opp_overlap 598069, overlap 598081 TAATTATTTTGAAAA CACGC TTAC GCGTG TTTTTTTGTTAAAAA TERM 751 598092 - 598146 + F 76 -6.3 -4.54753 | gap 2, opp_overlap 598100, overlap 598081 598095 598100 CGCGTGTTTTTTTGT TAAA-AAAACTATCACTTTAACAT-CT CCA AGTATGGTAAAGTAATAGTTTTCTTTA TTATTTTTGATCTTT TERM 752 598095 - 598142 + F 74 -5.2 -4.78157 | gap 1, opp_overlap 598100, overlap 598081 598092 598100 GTGTTTTTTTGTTAA AAAAACTATCACTTTAACAT-CT CCA AGTATGGTAAAGTAATAGTTTTC TTTATTATTTTTGAT TERM 753 598137 - 598100 - f 93 -7.3 -5.40072 | gap 1, opp_overlap 598081 598095 598092 598100 TTTTTGTTAAAAAAA CTATCACTTTAACAT-CT CCA AGTATGGTAAAGTAATAG TTTTCTTTATTATTT TERM 754 598100 - 598137 + F 77 -5.1 -5.20331 | gap 1, opp_overlap 598100, overlap 598081 598095 598092 TTTTTGTTAAAAAAA CTATCACTTTAACAT-CT CCA AGTATGGTAAAGTAATAG TTTTCTTTATTATTT TERM 755 598551 - 598562 + G 72 -4.4 -4.70266 | GGGCCGTCAGGGGCC GGTA AATC TACC TTTTTACGTGCTGTT LCK_00574 598428 - 599162 + | ABC-type polar amino acid transport system, ATPase component TERM 756 599209 - 599165 - f 73 -8.7 -3.24161 | opp_overlap 599167, overlap 599163 599166 GAAAGTCTTATAATA GTGATTGATGGTAATCGTGTG TCA CATACGATTACTATCAATCTT TTTTTATTTCTGTTA TERM 757 599208 - 599166 - f 84 -12.2 -2.54015 | opp_overlap 599167, overlap 599165 599163 AAAGTCTTATAATAG TGATTGATGGTAATCGTGTG TCA CATACGATTACTATCAATCT TTTTTTATTTCTGTT TERM 758 599167 - 599207 + F 100 -20.1 -6.04953 | opp_overlap 599166 599165 599163 AAGTCTTATAATAGT GATTGATGGTAATCGTGTG TCA CATACGATTACTATCAATC TTTTTTTATTTCTGT rpiA2 599172 - 599939 + | ribose 5-phosphate isomerase A usp3 600047 - 600484 + | universal stress protein UspA TERM 759 600491 - 600532 + T 100 -13.3 -4.19746 | opp_overlap 600496 600497 600503, overlap 600497 600503 GAATCATAATTTTAA GTAAAGTAAAAAGCAGTGA TTAA TCACTGCTTTTTATTTCGC TTCTTTTAGAATAAC TERM 760 600527 - 600496 - T 95 -11.8 -3.9377 | opp_overlap 600491 600497 600503, overlap 600497 600503 ATAATTTTAAGTAAA GTAAAAAGCAGTGA TTAA TCACTGCTTTTTAT TTCGCTTCTTTTAGA TERM 761 600497 - 600526 + T 100 -15.3 -3.92716 | opp_overlap 600497 600496 600503, overlap 600491 600503 TAATTTTAAGTAAAG TAAAAAGCAGTGA TTAA TCACTGCTTTTTA TTTCGCTTCTTTTAG TERM 762 600526 - 600497 - T 100 -15.3 -2.95539 | opp_overlap 600491 600497 600503, overlap 600496 600503 TAATTTTAAGTAAAG TAAAAAGCAGTGA TTAA TCACTGCTTTTTA TTTCGCTTCTTTTAG TERM 763 600503 - 600520 + T 100 -9.9 -5.33026 | opp_overlap 600503 600497 600496, overlap 600497 600491 TAAGTAAAGTAAAAA GCAGTGA TTAA TCACTGC TTTTTATTTCGCTTC TERM 764 600520 - 600503 - T 100 -9.9 -5.04222 | opp_overlap 600497 600491 600503, overlap 600497 600496 TAAGTAAAGTAAAAA GCAGTGA TTAA TCACTGC TTTTTATTTCGCTTC LCK_00577 601312 - 600524 - | peptidyl-prolyl cis-trans isomerase TERM 765 600592 - 600576 - G 70 -9.3 -3.15574 | overlap 600574 TTAATGGGATCAATA GGCGTGG AGC CCTCGCC CTCGGATTTGACCTT TERM 766 600699 - 600714 + g 100 -6.2 -5.85178 | GGATTACCACCATTT TTGTAG GCCG CTACAA TTTTTTTTGGATATT TERM 767 601261 - 601297 + g 82 -4 -5.48514 | gap 2, opp_overlap 601264 601265 601267, overlap 601265 601269 CGATGATTAGTCCCA CAAGTATCGTGACCATTG CAG CAATCGTCAC-ATA-TTG TTTTTCTTTATTCAT TERM 768 601265 - 601294 + g 75 -5.9 -4.78345 | gap 1, opp_overlap 601265 601264 601267, overlap 601261 601269 GATTAGTCCCACAAG TATCGTGACCATTG CAG CAATCGTCAC-ATA TTGTTTTTCTTTATT LCK_00578 601849 - 601328 - | SAM-dependent methyltransferase LCK_00579 602471 - 601833 - | membrane-associated phospholipid phosphatase TERM 769 602218 - 602208 - G 81 -6.8 -4.77438 | ATTGACCAGTAAAAA CTGC AAT GCAG GGTAAGCTTTCTTAT TERM 770 602707 - 602744 + H 100 -12.9 -5.1971 | GGTACCGCGATTAAT TCGCCCTATGTCATGCT TTTT AGTGTGATATAGGGTGA TTTTTCGTTTTTACT TERM 771 603274 - 603302 + G 83 -11.1 -3.69702 | opp_overlap 603273 603276, overlap 603276 603277 ATACGAGTCTAACAT GATGGTCAATTGG GAT CCAATTGACCGTG TTGTCTTGGCTAATG TERM 772 603300 - 603276 - g 80 -11.5 -2.75252 | opp_overlap 603274 603276 603277, overlap 603273 ACGAGTCTAACATGA TGGTCAATTGG GAT CCAATTGACCG TGTTGTCTTGGCTAA TERM 773 603276 - 603300 + G 95 -13.7 -3.42482 | opp_overlap 603276 603273, overlap 603274 603277 ACGAGTCTAACATGA TGGTCAATTGG GAT CCAATTGACCG TGTTGTCTTGGCTAA TERM 774 603277 - 603299 + G 95 -15 -2.65007 | opp_overlap 603276 603273, overlap 603276 603274 CGAGTCTAACATGAT GGTCAATTGG GAT CCAATTGACC GTGTTGTCTTGGCTA leuS 602816 - 605227 + | leucyl-tRNA synthetase TERM 775 605275 - 605250 - f 100 -9.1 -4.83169 | overlap 605253 ATTGTGTGATAAAAA TAGGCTGACTA AGTA TAGTCAGCGTA CATAATAGTTTAAGA TERM 776 605272 - 605253 - f 83 -10.8 -3.01915 | overlap 605250 GTGTGATAAAAATAG GCTGACTA AGTA TAGTCAGC GTACATAATAGTTTA TERM 777 605955 - 605965 + G 76 -6.8 -4.46775 | ACTAGGAATTGTATT TGGC GGA GCCA TTTATATTTTGAGTC LCK_00581 605302 - 607266 + | O-antigen and teichoic acid export protein TERM 778 607261 - 607281 + F 100 -7.7 -5.8901 | opp_overlap 607261 ATCTTACGTCCAAAA CGATAATTG TGA TAATTATCG TTTTTTATTTTCTCT TERM 779 607281 - 607261 - f 75 -7 -4.11394 | opp_overlap 607261 ATCTTACGTCCAAAA CGATAATT GTGAT AATTATCG TTTTTTATTTTCTCT LCK_00582 607390 - 608217 + | HD superfamily hydrolase LCK_00583 608222 - 609139 + | hypothetical protein TERM 780 609202 - 609185 - f 86 -2.7 -5.84381 | opp_overlap 609187, overlap 609187 GTATTAACAAAAAAA TATTAGC AAAT GCTAATT TAAAAGGGGAACGCT TERM 781 609200 - 609187 - f 71 -5.3 -4.55661 | opp_overlap 609187, overlap 609185 ATTAACAAAAAAATA TTAGC AAAT GCTAA TTTAAAAGGGGAACG LCK_00584 609219 - 609767 + | putative cytoplasmic membrane protein; LemA-like protein TERM 782 610150 - 610126 - g 70 -7.9 -3.70751 | opp_overlap 610126 TAATAATCCCAAGAA TGCTGCTGTTG CTG CAACAACAGGA TTAATCGCCTTAATG htpX 609767 - 610657 + | Zn-dependent protease with chaperone function TERM 783 610661 - 610681 + T 93 -6.9 -5.72622 | opp_overlap 610661 610664 GAAAAAATGTAAGAA CATCTAGTT AAT GACTAGGTG TTTTTTATTTGTGAA TERM 784 610697 - 610708 + T 79 -4.4 -5.27923 | TTTTTTATTTGTGAA GCAA TTAA TTGC TTTTTTCTAGGGTTG LCK_00586 610914 - 610675 - | hypothetical protein TERM 785 611029 - 611003 - H 72 -8.2 -3.45768 | CATGATAAGTCAGAA TCAGTAAATCAT TGC ACAATTTACTGA TGACATTTAAATCTG TERM 786 611241 - 611218 - g 82 -11.2 -3.14026 | GACACCGACATTGAA GCTGAAATTA CCAT TAATTTCAGC GGCCATGGACACTGT LCK_00587 611054 - 612226 + | IMP dehydrogenase/GMP reductase LCK_00588 612250 - 613230 + | IMP dehydrogenase/GMP reductase TERM 787 614184 - 614172 - g 71 -4.9 -4.52505 | opp_overlap 614172, overlap 614167 AACAAAAACGTAAAA TCATT GGT AATGA ATTTATTGAAGTCTT guaA 613265 - 614812 + | GMP synthase TERM 788 614883 - 614907 + T 100 -9.3 -5.48213 | opp_overlap 614883 GCCGATAAATAAAAA GAGCAAGCCTA CTT TGTGCTTGCTC TTTTTATTTTGCCTA TERM 789 614907 - 614883 - T 89 -7.2 -5.38054 | opp_overlap 614883 GCCGATAAATAAAAA GAGCAAGC CTACTTTGT GCTTGCTC TTTTTATTTTGCCTA LCK_00590 616107 - 615013 - | Dyad symmetry binding protein TERM 790 616375 - 616356 - R 85 -6.4 -5.38047 | opp_overlap 616356 616351 TAGGCATATAAAAAA GCAAGCCC AGAT AAGCTTGC TTTTATGGTTATTGT LCK_00591 616830 - 616384 - | hypothetical protein TERM 791 616583 - 616606 + g 86 -7.4 -5.0133 | TCTGTCATTTTTTTT CGCCCTTCAA TATC TTGAGGAGCG TTTTTTAACGACGTA TERM 792 617602 - 617587 - g 79 -5.4 -4.90013 | overlap 617588 GAAGGCAATCAAAAA GTCGCT GCAA AGCAAC AAGAGGTAGATCAAT LCK_00592 617269 - 617751 + | prophage pi3 protein 39-like protein TERM 793 617842 - 617809 - T 81 -6.1 -4.87786 | opp_overlap 617810, overlap 617810 TTAATGTTATAAAAA GCATCGTGCTAAC GCATACCT GTTAACACGATGT TTTTTTGTTATGAAG TERM 794 617841 - 617810 - T 81 -9.6 -3.51948 | opp_overlap 617810, overlap 617809 TAATGTTATAAAAAG CATCGTGCTAAC GCATACCT GTTAACACGATG TTTTTTTGTTATGAA TERM 795 617810 - 617841 + T 100 -8.1 -5.88565 | opp_overlap 617810 617809 TAATGTTATAAAAAG CATCGTGCTAACG CATACC TGTTAACACGATG TTTTTTTGTTATGAA LCK_00593 619763 - 617850 - | peptide ABC transporter permease ysaC 620524 - 619760 - | ABC transporter ATP-binding protein hpk4 621598 - 620603 - | Signal transduction histidine kinase TERM 796 621246 - 621231 - G 71 -7.6 -3.89346 | opp_overlap 621217 621231 621230 621245 TCGTGACTCCATAAA GTCAAG TAAT CTTGAC GTTCTTTGAACGCTT rrp4 622269 - 621595 - | response regulator TERM 797 622752 - 622720 - g 83 -7.1 -4.77036 | overlap 622724 622728 622744 GCTCAGCAGCAAAAA TTACTGAAGCTTACT TTA AGCAAGCGTCAACAA CGGATTACAATGGTG recU 622482 - 623099 + | recombination protein U pbp1A 623112 - 625280 + | membrane carboxypeptidase (penicillin-binding protein) TERM 798 625295 - 625312 + GF 88 -7.7 -5.07486 | ATTTTATGTTTGGAA GTCTTGC ACAT GCAAGGC TTTTTATTCGAGGTG LCK_00599 625201 - 625902 + | hypothetical protein LCK_00600 625978 - 626358 + | methylase TERM 799 626748 - 626727 - f 71 -7.4 -3.6959 | AGATGATTACCGAAA GTGATATG TACCTG CATATCAC TGGAACAAAACATGG TERM 800 626788 - 626802 + F 100 -11.4 -5.63504 | GCTTACAGCAGGTGA CGCCAC TTT GTGGCG TTTTTTTATGGCGTT TERM 801 626982 - 626966 - g 80 -2.3 -5.54264 | opp_overlap 626975 626979, overlap 626968 AAACATTGAAAAAAA TATCATT ATT AATGATG AGCATTATCTTGTTG LCK_00601 626941 - 628416 + | amino acid ABC transporter periplasmic protein TERM 802 628426 - 628445 + F 95 -8.6 -5.42259 | CGTTAACATTTCAAG GCATCAAC TATT GTTGGTGC TTTTTTTGACCATAA TERM 803 628540 - 628560 + F 100 -8.3 -6.19302 | TACAAATTAGGTGAA TCGTTCGGT ATA AACGAACGA TTTTTTTTATTGTGT TERM 804 628767 - 628754 - g 72 -3.1 -5.17576 | CAGCAATGCAAAAAA CAACA GTAT TGCTG GATGAATTAGGCGTG purE 628696 - 629181 + | phosphoribosylcarboxyaminoimidazole (NCAIR) mutase TERM 805 629488 - 629469 - g 71 -5.1 -4.49337 | opp_overlap 629469 CCACAAGGGACAAAA TTACTTG AAATAA CAAGTAA TCGGTTGACGGAAAA purK 629178 - 630293 + | phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) TERM 806 630328 - 630318 - g 70 -5.4 -4.39407 | opp_overlap 630318 GCAAACAATTGAAAA GCAA GCA TTGC GTTATCAGGGCAAAG TERM 807 630784 - 630772 - g 77 -6.3 -4.64598 | CAACTACGTCAAAAA TCACA AGA TGTGA ACCAATTATTACGCG purC 630280 - 631023 + | phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase purS 631035 - 631301 + | phosphoribosylformylglycinamidine synthase, PurS protein purQ 631298 - 631966 + | phosphoribosylformylglycinamidine synthase domain-containing protein purL 632007 - 634247 + | phosphoribosylformylglycinamidine synthase domain-containing protein purF 634229 - 635851 + | amidophosphoribosyltransferase purM 635848 - 636885 + | phosphoribosylaminoimidazole (AIR) synthetase TERM 808 637401 - 637413 + G 74 -6.3 -4.40804 | GAGACACGTATTCAT CATGT TGA ACATG TTTTATACCCTAATA purN 636879 - 637469 + | phosphoribosylglycinamide formyltransferase purH 637466 - 638992 + | bifunctional phospho ribosylaminoimidazole carboxamide formyltransferase/IMP cyclohydrolase TERM 809 639005 - 639024 + F 86 -5 -5.69473 | opp_overlap 639005 TAAAATTAGCTAAAA CACCCA GCCACTAA TGGGTG TTTTTTTATGCTATA TERM 810 639130 - 639117 - g 71 -3.9 -4.87318 | TTGAAAATCCAAAAA CAAAA GAAA TTTTG GTTGAAGATCGCAAA LCK_00612 639059 - 639520 + | NTP pyrophosphohydrolase including oxidative damage repair enzymes TERM 811 639567 - 639587 + F 86 -2.6 -5.92399 | overlap 639570 TTAAAAAACGTCTGA TTGTTCGT TATTT ACGAATGA TTTTTTGTTTTGTTA purD 639694 - 640947 + | phosphoribosylamine-glycine ligase fhs 640989 - 642653 + | formyltetrahydrofolate synthetase TERM 812 642978 - 642998 + G 73 -6.9 -4.28018 | opp_overlap 642978 GGCTTGGTATACCAA TACGCAATA CGG TATGGCGTA TTTTGATGCACTATT LCK_00616 642721 - 643524 + | esterase TERM 813 643527 - 643548 + F 95 -8.8 -4.99056 | opp_overlap 643527 ACGACTGTCGTAAAA CACGAACT GAAAAA AGTTCGTG TTTTTAATTATATTA TERM 814 643548 - 643527 - f 85 -8.8 -4.08945 | opp_overlap 643527 ACGACTGTCGTAAAA CACGAACT GAAAAA AGTTCGTG TTTTTAATTATATTA LCK_00617 643656 - 644873 + | integral membrane transporter TERM 815 645972 - 645982 + G 73 -6.8 -4.22883 | TATTTCTCATTCTTC TGCG GAA CGCA TTATTTTAGCTGATG purB 645052 - 646347 + | adenylosuccinate lyase hpt1 646344 - 646907 + | hypoxanthine phosphoribosyltransferase TERM 816 646951 - 646909 - T 100 -18.1 -4.57304 | gap 1, opp_overlap 646910 646919, overlap 646919 ATTTAATTAAATAAA CTAACAAAAAGCGTCACCTA TTTT CAGGTGACGCTTTTTGTT-G TGTGATGAAATTTTG TERM 817 646910 - 646951 + T 100 -19.8 -2.82681 | opp_overlap 646909 646919, overlap 646919 TTTAATTAAATAAAC TAACAAAAAGCGTCACCT ATTTTC AGGTGACGCTTTTTGTTG TGTGATGAAATTTTG TERM 818 646919 - 646942 + T 100 -12.5 -5.25699 | opp_overlap 646909 646919, overlap 646910 ATAAACTAACAAAAA GCGTCACCT ATTTTC AGGTGACGC TTTTTGTTGTGTGAT TERM 819 646942 - 646919 - T 100 -13.2 -5.25906 | opp_overlap 646919 646910, overlap 646909 ATAAACTAACAAAAA GCGTCACCTA TTTT CAGGTGACGC TTTTTGTTGTGTGAT LCK_00620 647983 - 646922 - | L-lactate dehydrogenase (FMN-dependent) TERM 820 647361 - 647373 + g 71 -4.9 -4.5448 | overlap 647363 TTGATTGCAGCTGGA TTCAA TTG TTGAA TTGTTTTTATAGCTG TERM 821 647363 - 647376 + g 71 -3.9 -4.89339 | overlap 647361 GATTGCAGCTGGATT CAATT GTTG AATTG TTTTTATAGCTGATT yebA 649006 - 647987 - | phosphomevalonate kinase mvaD 649949 - 648999 - | diphosphomevalonate decarboxylase LCK_00623 650122 - 651279 + | permease cspR 651276 - 651788 + | rRNA methylase (SpoU class) TERM 822 651938 - 651957 + F 100 -10 -4.9792 | opp_overlap 651938 CACGAGCTATATCAA GTCGCAAC TTCG GTTGCGGC TTTTTATATAGCATG TERM 823 651986 - 652011 + F 83 -9.9 -3.79251 | opp_overlap 651986, overlap 651992 TGAGGTTAAGCAAAA CAAAAACGAAC ATGT GTTTGTTTTTG TTTCATGCTAAAATA TERM 824 652011 - 651986 - f 81 -7.7 -4.42238 | opp_overlap 651986 651992 TGAGGTTAAGCAAAA CAAAAACGAAC ATGT GTTTGTTTTTG TTTCATGCTAAAATA TERM 825 651992 - 652005 + F 74 -3.1 -5.34309 | opp_overlap 651986, overlap 651986 TAAGCAAAACAAAAA CGAAC ATGT GTTTG TTTTTGTTTCATGCT TERM 826 652785 - 652739 - g 80 -11 -3.4214 | overlap 652737 652746 AGCCCAAGAAAGATA TTACAGATTATGGTGAAGACCC ATT AGGTCTTCACCATAAAAAGCAA GCAGAAATTGTGCAA TERM 827 652778 - 652746 - g 100 -18.7 -3.02074 | overlap 652739 652737 GAAAGATATTACAGA TTATGGTGAAGACCC ATT AGGTCTTCACCATAA AAAGCAAGCAGAAAT TERM 828 654325 - 654304 - g 73 -7.3 -4.06786 | opp_overlap 654303 ATTGAACAGCAGAAA GCTTCAACA TCTT TGTTGCAGC GTCGTTTTAGAATTG ftsK 652066 - 654477 + | DNA segregation ATPase FtsK/SpoIIIE TERM 829 654504 - 654484 - T 88 -6.9 -5.20534 | opp_overlap 654484, overlap 654478 ATTAATTAATAAAAA GCCTAAC GATAAAA GTTAGGC TTTTTTATATTAACT TERM 830 654484 - 654504 + T 93 -6.9 -5.48063 | opp_overlap 654484 654478 ATTAATTAATAAAAA GCCTAAC GATAAAA GTTAGGC TTTTTTATATTAACT LCK_00626 655020 - 654514 - | hypothetical protein ade 656678 - 655023 - | adenine deaminase TERM 831 655504 - 655488 - G 73 -8 -3.86897 | TTTATCGGCGACAAA CAAGCC TTCTT GGCTTG GTACATCTTCAACTA glmS 656863 - 658668 + | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TERM 832 658681 - 658704 + GF 100 -12.6 -5.97575 | opp_overlap 658681 TAATTTTTTAATGCA CGTGATAAGA AAAT TCTTATCACG TTTTTTTTGTAGGTT TERM 833 658704 - 658681 - gf 86 -12.6 -2.53213 | opp_overlap 658681 TAATTTTTTAATGCA CGTGATAAGA AAAT TCTTATCACG TTTTTTTTGTAGGTT TERM 834 658964 - 658950 - gf 78 -2.8 -5.42862 | ATACTGTCAAAAAAA TCGC TACAGCT GCGA GTGACTTAGGCGTTA TERM 835 659014 - 659040 + GF 88 -7.3 -5.16237 | opp_overlap 659009 659015, overlap 659015 ATTTTCAACAGAGAA TTGGTCTCGTC CTAAT GACGAGGTCAG TTTTTTGATGAAGTT TERM 836 659015 - 659039 + GF 77 -8.6 -3.68658 | opp_overlap 659009 659015, overlap 659014 TTTTCAACAGAGAAT TGGTCTCGTC CTAAT GACGAGGTCA GTTTTTTGATGAAGT TERM 837 659492 - 659505 + GF 71 -6.7 -4.08216 | GCTGATGACTTAGTA GAAGC GATT GCTTC TTTTACGGCACGTGA uppS 658622 - 659572 + | undecaprenyl diphosphate synthase LCK_00630 659576 - 660370 + | CDP-diglyceride synthetase TERM 838 660982 - 660964 - g 73 -8.2 -3.89212 | opp_overlap 660963 GATTTATACAGCAAA GTGTCACT TTA AATGACAC AGTTGTTGGCAATGT LCK_00631 660375 - 661631 + | membrane-associated Zn-dependent protease proS 661712 - 663427 + | prolyl-tRNA synthetase TERM 839 663459 - 663428 - f 72 -8.2 -3.4489 | gap 1, opp_overlap 663437, overlap 663434 663437 AATGGTGACAAGTAA GTAAAACTAGCCGAT ATA ATCGGCTT-TTTTAC TCGAGAATAGTGAGG TERM 840 663451 - 663437 - f 79 -10 -3.19941 | opp_overlap 663437, overlap 663434 663428 AAGTAAGTAAAACTA GCCGAT ATA ATCGGC TTTTTTACTCGAGAA TERM 841 663437 - 663451 + F 100 -10 -5.14563 | opp_overlap 663437 663434 663428 AAGTAAGTAAAACTA GCCGAT ATA ATCGGC TTTTTTACTCGAGAA TERM 842 664307 - 664291 - g 90 -5.2 -5.52986 | ATTTCAGCAAAAAAA TTCTCA AATAA TGAGAA TGACGAAGCTGTTTT polC 663481 - 667794 + | DNA polymerase III, alpha subunit LCK_00634 667846 - 668271 + | hypothetical protein TERM 843 668264 - 668306 + F 100 -9.4 -6.41805 | opp_overlap 668264 AAAGATTACAAAAAA GCAAATGAAGACTACTTATT ATC AATAAGTAATAATCATTTGC TTTTTTTTTTAATAA TERM 844 668306 - 668264 - f 100 -11.6 -5.38321 | opp_overlap 668264 AAAGATTACAAAAAA GCAAATGAAGACTACTTATT ATC AATAAGTAATAATCATTTGC TTTTTTTTTTAATAA TERM 845 668594 - 668627 + G 71 -7.4 -3.92373 | overlap 668599 AGGCGCTAATCAGGC AGTTGCTTCTGCGC GTCAAG GCGCAGAAGTATCG TTTATAGGTGCAGTC TERM 846 668599 - 668622 + G 84 -12.5 -3.06711 | overlap 668594 CTAATCAGGCAGTTG CTTCTGCGC GTCAAG GCGCAGAAG TATCGTTTATAGGTG rbsK 668427 - 669371 + | ribokinase family sugar kinase TERM 847 669422 - 669432 + G 89 -5.4 -5.49729 | opp_overlap 669405, overlap 669415 CGATTACTCGGGCAA TCAG CGC CTGA TTTTTTTGCGTCCTT LCK_00636 669368 - 670807 + | tRNA and rRNA cytosine-C5-methylase TERM 848 670808 - 670822 + F 80 -7.2 -4.46835 | opp_overlap 670802 670807 670808 AGTGATAATCAATAG GTCATT GTC AATGAC TTTATTTGGGCTTGT TERM 849 671032 - 671022 - g 87 -3.2 -5.75945 | ACGGGTCAAAAAAAA TCCG ATG CAGA AACACACAAAGGCGC TERM 850 671980 - 671970 - g 70 -3.2 -4.93296 | GCAGCAGTAGAAAAA GCTC AAA AAGC AATCATCAACGGTAC LCK_00637 670932 - 672047 + | putative ABC transporter TERM 851 672064 - 672081 + F 76 -2.6 -5.58179 | TAGTTATCGTAAAAA GCGTCC GAGTAG GGGTGC TTTTTTGTTATAATG TERM 852 672290 - 672277 - g 71 -5.3 -4.61231 | overlap 672280 672281 TTAGAGCCGGAAAAA GCATT GGCA AATGC CATACAATTAAAAGT LCK_00638 672094 - 672468 + | hypothetical protein TERM 853 672789 - 672776 - g 83 -5.3 -5.29846 | AACGTGAAACAAAAA TATGC AACA GCATA CTATAATTACCGTGA pgm2 672470 - 673123 + | phosphoglycerate mutase TERM 854 674767 - 674747 - g 85 -8.3 -4.38927 | opp_overlap 674749 TTCTTAGAGAATAAA CATGATCGT TCC ACGTTCATG GTATCACCAGAGCAA recD 673154 - 675553 + | exonuclease V subunit alpha prs 675600 - 676574 + | phosphoribosylpyrophosphate synthetase TERM 855 676698 - 676688 - g 72 -3.2 -5.06451 | CATTATGTCAAAAAA GTAC AAT GCAC GTTCCAAAGGTCTTA LCK_00642 676571 - 677470 + | hypothetical protein LCK_00643 677473 - 678462 + | oxidoreductase TERM 856 678520 - 678493 - T 100 -13.6 -5.39721 | opp_overlap 678493 CTATCACATAAAAAA CAGCCAATATGC TAAT ACATATTGGCTG TTTTTTGATCAGCAC TERM 857 678493 - 678520 + T 100 -12.9 -5.14563 | opp_overlap 678493 CTATCACATAAAAAA CAGCCAATATG CTAATA CATATTGGCTG TTTTTTGATCAGCAC LCK_00644 679657 - 678554 - | response regulator TERM 858 679455 - 679432 - G 93 -6.8 -5.38497 | opp_overlap 679435 AGTCAAACCAAAAAA GAACAGCTAT ATTA ATATCTGTTC TAACTAATAAAAAGT TERM 859 679494 - 679508 + g 71 -5 -4.62471 | TGATAGCTAAACGAT TGGTAG GTA CTATCA TTTTCTATGTCGCTT ylcC 679959 - 680933 + | sortase (surface protein transpeptidase) TERM 860 680967 - 680928 - T 100 -25.4 -3.73224 | opp_overlap 680928 680938, overlap 680938 GCAGGGGGCACCAAA CCATAAAAAAGCACGACC AAAA GGTCGTGCTTTTTTATGG TTTAAAGGGGTTGAA TERM 861 680928 - 680967 + T 100 -25.4 -3.55622 | opp_overlap 680928 680938, overlap 680938 GCAGGGGGCACCAAA CCATAAAAAAGCACGACC AAAA GGTCGTGCTTTTTTATGG TTTAAAGGGGTTGAA TERM 862 680957 - 680938 - T 100 -13.6 -5.42265 | opp_overlap 680938 680928, overlap 680928 CCAAACCATAAAAAA GCACGACC AAAA GGTCGTGC TTTTTTATGGTTTAA TERM 863 680938 - 680957 + T 100 -13.6 -5.42265 | opp_overlap 680928 680938, overlap 680928 CCAAACCATAAAAAA GCACGACC AAAA GGTCGTGC TTTTTTATGGTTTAA mvk 681901 - 680969 - | mevalonate kinase TERM 864 681255 - 681270 + g 76 -4.7 -5.03145 | ACTTTTTCAGCGATC TTGCC GAGATG GGCAA TTTTTTGCCAGGTTA TERM 865 681580 - 681555 - G 81 -2.6 -5.58209 | GCAAAGTCAAAAAAA GCCTTTGTAA TAGACG TTGCAAAAGC AGCCGAAGCACCAAA TERM 866 683382 - 683370 - g 79 -3.3 -5.47218 | CGTCATCTAAAAAAA TGGCC TGT GGTCA CGATGGAGACGCCGA LCK_00647 682056 - 684461 + | Rad3-related DNA helicase LCK_00648 684503 - 685033 + | hypothetical protein aspB 685044 - 686225 + | aspartate/tyrosine/aromatic aminotransferase TERM 867 686530 - 686543 + G 71 -5.3 -4.49389 | opp_overlap 686530 GGCGAAATTCACGAA GATGA ACGG TCATC TTTTGGTTATGAAAT asnS 686284 - 687591 + | asparaginyl-tRNA synthetase TERM 868 687657 - 687677 + F 100 -14.1 -4.87273 | opp_overlap 687657 GACTATAGTAAAAAA CGTCCAAGT TAG ACTTGGACG TTTTTATCAAGTGTT TERM 869 687677 - 687657 - f 100 -14.1 -5.23316 | opp_overlap 687657 GACTATAGTAAAAAA CGTCCAAGT TAG ACTTGGACG TTTTTATCAAGTGTT LCK_00652 687717 - 688355 + | putative primosome component LCK_00651 688634 - 688347 - | hypothetical protein LCK_00653 688702 - 689835 + | N6-adenine-specific DNA methylase TERM 870 689826 - 689884 + F 93 -13.9 -3.17219 | gap 2, opp_overlap 689840 689845, overlap 689827 689840 ATATTGGGGTAAGCG T-G-CAAAATAAAAAACAAGTTTTATGCA TCA TGCATAAAGTTTGTTTTTTATTTTGTCTA TTACTGAGCATTATG TERM 871 689827 - 689882 + F 100 -19 -3.14527 | gap 1, opp_overlap 689840 689845, overlap 689826 689840 TATTGGGGTAAGCGT G-CAAAATAAAAAACAAGTTTTATGCA TCA TGCATAAAGTTTGTTTTTTATTTTGTC TATTACTGAGCATTA TERM 872 689868 - 689840 - f 93 -6.1 -5.79595 | opp_overlap 689827 689826 689840, overlap 689845 GTGCAAAATAAAAAA CAAGTTTTATGCA TCA TGCATAAAGTTTG TTTTTTATTTTGTCT TERM 873 689840 - 689868 + F 100 -10.5 -5.8901 | opp_overlap 689840 689845, overlap 689827 689826 GTGCAAAATAAAAAA CAAGTTTTATGCA TCA TGCATAAAGTTTG TTTTTTATTTTGTCT TERM 874 690136 - 690123 - g 70 -5.9 -4.43832 | opp_overlap 690125, overlap 690124 690125 GAACACATAAAACAA GCCGC CGTT GCAGC GATTAGTTCAGATGA TERM 875 690918 - 690931 + G 89 -5.9 -5.36364 | GAGTTCGAATGCATA GTGCC CAAT GGCGC TTTTTATGTTTTTGC araT1 689961 - 691148 + | aspartate/tyrosine/aromatic aminotransferase LCK_00655 691292 - 691816 + | histone acetyltransferase HPA2 LCK_00656 691918 - 692517 + | oxidoreductase TERM 876 692532 - 692556 + F 100 -9.3 -4.78149 | ATTAAGCATTGTTTT GTCACCGATGA TAA TCATGGGTGGC TTTTTAAATTGTGAC LCK_00657 692642 - 695194 + | Lyzozyme M1 (1,4-beta-N-acetylmuramidase) LCK_00658 695218 - 695676 + | hypothetical protein TERM 877 695684 - 695713 + F 100 -15.9 -5.45802 | opp_overlap 695684 GATTTTAATTAAAAA GCAAGTAATCCGT ATTA ACGGGTTACTTGC TTTTTGTTTTCAAAA TERM 878 695713 - 695684 - f 100 -13.7 -4.87291 | opp_overlap 695684 GATTTTAATTAAAAA GCAAGTAATCCGT ATTA ACGGGTTACTTGC TTTTTGTTTTCAAAA TERM 879 695714 - 695729 + F 80 -4.8 -5.35815 | TAACGGGTTACTTGC TTTTTG TTTT CAAAAA TTTTTCTTTCATCTC LCK_00659 695960 - 696907 + | transcriptional regulator TERM 880 696928 - 696911 - f 88 -7.1 -4.98255 | CGTCAAGTATAAAAA CATGTTA TCGT TAACATG TAAAACACTATATCA TERM 881 697005 - 696956 - f 100 -15.5 -3.02144 | opp_overlap 696956 696960, overlap 696959 696971 696991 TCATTTTTTGCAAGA CGACTTTATACTAAATTTTGTAA GCGT TTACAAAATTTAGTATAAAGGAG TTTATCATGCGTAAT TERM 882 696956 - 697005 + F 100 -15.5 -3.98214 | opp_overlap 696956 696959 696971 696991, overlap 696960 TCATTTTTTGCAAGA CGACTTTATACTAAATTTTGTAA GCGT TTACAAAATTTAGTATAAAGGAG TTTATCATGCGTAAT TERM 883 697002 - 696959 - f 100 -20.2 -2.73875 | opp_overlap 696956 696960, overlap 696956 696971 696991 TTTTTTGCAAGACGA CTTTATACTAAATTTTGTAA GCGT TTACAAAATTTAGTATAAAG GAGTTTATCATGCGT TERM 884 697158 - 697173 + G 83 -3.3 -5.59962 | GACACTCGGTGCAGA TCCAA CAAAAC TTGGA TTTTTCTTTATTTTG LCK_00660 697012 - 698355 + | major facilitator superfamily permease TERM 885 699175 - 699151 - g 71 -5 -4.59853 | gap 1, opp_overlap 699151 GCAAGCTTTGAAAAA CGCGTG-ATTG TGAC CACTTCACGCG ATTATGATGATTTAA TERM 886 700181 - 700194 + G 72 -3.1 -5.14626 | TCAAACAGTCAGATA CATTG CACG CGATG TTTTATTTTCCTGAT map1 698395 - 700656 + | trehalose or maltose hydrolase ( phosphorylase) LCK_00662 700753 - 701427 + | phosphatase/phosphohexomutase TERM 887 701467 - 701441 - T 76 -3.7 -5.35815 | opp_overlap 701441 GATATCAAATAAAAA GCACAGTAATA TTTGT TAATTCTGTGC TTTTTATGATGCTAT TERM 888 701441 - 701467 + T 70 -3.7 -4.93898 | opp_overlap 701441 GATATCAAATAAAAA GCACAGTAATA TTTGT TAATTCTGTGC TTTTTATGATGCTAT LCK_00663 702469 - 701471 - | transcriptional regulator TERM 889 702544 - 702527 - H 73 -8.5 -3.23274 | opp_overlap 702526 GCGGTTACAATTTAA TGCGTAA ACGT TTACGCA AATTATTGTTAGTGT TERM 890 703515 - 703537 + G 75 -10 -3.01726 | overlap 703514 703517 AGTGATGCTTAAGCG CATTTTGTCA AAA TGGCAAAATG ATTTATATGGCAAAG TERM 891 704155 - 704142 - g 79 -6.7 -4.55118 | overlap 704154 TAATTTTACAGAAAA GATGC AAAA GCATC ACTATGAGCGACCTG LCK_00664 702586 - 704256 + | glycosidase TERM 892 704371 - 704383 + G 74 -4.8 -4.75404 | ACTACCCATGTTGAG CAGC ATGCA GCTG TTTTTGATGACATTT LCK_00665 704324 - 705691 + | major facilitator superfamily permease LCK_00666 705693 - 707369 + | glycosidase TERM 893 707615 - 707646 + F 100 -21.8 -4.6902 | opp_overlap 707615 TGGTACCGTGCAAAA GCGCCCTTAGTAAC AGAT GTTACTAAGGGCGC TTTTTAGGCTTGTAA TERM 894 707646 - 707615 - f 100 -21.8 -4.09685 | opp_overlap 707615 TGGTACCGTGCAAAA GCGCCCTTAGTAAC AGAT GTTACTAAGGGCGC TTTTTAGGCTTGTAA TERM 895 707679 - 707714 + F 95 -15 -3.06183 | opp_overlap 707678 707679, overlap 707678 ATAATAAAGGAGAAT CTGTTGTCATTGAAAC AGGT GTTTCAATGACAGTAG TTAAATAAAAATGGC TERM 896 707714 - 707679 - f 79 -10.6 -2.81256 | opp_overlap 707678 707679, overlap 707678 ATAATAAAGGAGAAT CTGTTGTCATTGAAAC AGGT GTTTCAATGACAGTAG TTAAATAAAAATGGC TERM 897 707736 - 707726 - g 76 -3.2 -5.30616 | GTAGTTAAATAAAAA TGGC AAA ACCA ACTTTTCAAAAACCA TERM 898 708403 - 708413 + G 74 -4 -5.02323 | overlap 708391 GTTGAAGATGCACCT TCTA TTC TAGA TTTTCTTTCTGATGA hisS 707725 - 709029 + | histidyl-tRNA synthetase TERM 899 710537 - 710527 - g 93 -5.4 -5.62045 | ATATACAAGAAAAAA TGCT CAA AGCA CTTGGATTTACACCG aspS 709026 - 710795 + | aspartyl-tRNA synthetase LCK_00669 710883 - 711749 + | integral membrane protein TERM 900 711755 - 711774 + T 100 -10.8 -5.5604 | opp_overlap 711755 GGAGCTATAAAAAAA GCAGAATC TGAT GATTCTGC TTTTTTATTACTTAC TERM 901 711774 - 711755 - T 100 -10.8 -5.64274 | opp_overlap 711755 GGAGCTATAAAAAAA GCAGAATC TGAT GATTCTGC TTTTTTATTACTTAC LCK_00670 713180 - 711786 - | gamma-aminobutyrate permease pucR 714848 - 713301 - | purine transport regulator TERM 902 714703 - 714685 - G 75 -8.2 -4.07568 | opp_overlap 714684 GGTTGCTGTTGAAAA TGGTAACC AGA AGTTACCA ATAATTGACCGTCAA TERM 903 716160 - 716150 - g 71 -4 -4.92385 | opp_overlap 716150 TATATTTAAAGAAAA TTCA GCA TGAA TCTTTGTTTTTTGTT LCK_00672 714994 - 716262 + | major facilitator superfamily permease TERM 904 716493 - 716473 - g 73 -10.5 -2.90496 | overlap 716470 CGGTGTTTCAAAGGA CGGTACTCT CCA AGAATACCG TAAGCGCGAATTCTA rpsU 716396 - 716581 + | ribosomal protein S21 TERM 905 716593 - 716608 + F 89 -6.8 -5.60556 | opp_overlap 716593 TTAATTGGTTCTAAA CGTCAC TTAG GTGGCG TTTTTCTTTTGTATT LCK_00674 716667 - 717110 + | GatB/Yqey domain-containing protein TERM 906 717147 - 717135 - f 89 -9.1 -4.20084 | opp_overlap 717135 AGTATGTAGGTAAAA TCGGC TCA GCCGA TTTTTTAGCATAATG TERM 907 717135 - 717147 + F 100 -9.1 -5.06451 | opp_overlap 717135 AGTATGTAGGTAAAA TCGGC TCA GCCGA TTTTTTAGCATAATG TERM 908 717215 - 717200 - f 74 -3.2 -5.34309 | AGTATTAAAGAAAAA CGCG TGAAGTTG CGCG TCAGAGGAAAAAATA LCK_00675 717231 - 718112 + | hypothetical protein xerD 718096 - 718992 + | site-specific recombinase XerD ribT 719026 - 719379 + | putative reductase LCK_00678 719361 - 720137 + | segregation and condensation protein A scpB 720127 - 720729 + | segregation and condensation protein B rluB 720722 - 721471 + | 16S rRNA uridine-516 pseudouridylate synthase TERM 909 721690 - 721705 + F 76 -2.6 -5.40072 | gap 1 CCTTTTTGTGATACC CTG-ACA AAT TGTGCAG TTTTTTTGAGGCAAA TERM 910 722085 - 722107 + G 80 -11.4 -2.77148 | opp_overlap 722085 722089, overlap 722081 722089 TTAGCAATAATCATA GCAACAGTTG GGT TAACTGTTGC TGCTGTGTTGATGAA TERM 911 722107 - 722085 - g 78 -10.7 -3.03203 | opp_overlap 722081 722085 722089, overlap 722089 TTAGCAATAATCATA GCAACAGTT GGGTT AACTGTTGC TGCTGTGTTGATGAA LCK_00681 721725 - 722309 + | hypothetical protein LCK_00682 722386 - 722934 + | hypothetical protein TERM 912 723028 - 723011 - g 73 -7.1 -3.965 | CTGGAAAATCAACAA TTGCTAA AATA TTAGCAA CAAATTTAAAGTATG cmk 722953 - 723630 + | cytidylate kinase TERM 913 723635 - 723650 + F 95 -9 -5.21709 | opp_overlap 723635 AGAAACCCTAAGTTA CAGCGT GAAA ACGCTG TTTTTTACTATACAA rpsA 723726 - 724916 + | 40S ribosomal protein S1 TERM 914 724929 - 724956 + F 93 -10 -4.08692 | opp_overlap 724934 724936, overlap 724934 TAAGATATGACTAGG TAAGAGAGCTGG TTCG CCAGTTCTTTTA TTTTGAACAAAGTTG TERM 915 724934 - 724951 + F 88 -7.7 -5.07652 | opp_overlap 724934 724936, overlap 724929 TATGACTAGGTAAGA GAGCTGG TTCG CCAGTTC TTTTATTTTGAACAA TERM 916 725538 - 725549 + G 73 -5.8 -4.49937 | opp_overlap 725533 725538, overlap 725533 CGAACAAGAAGATGA CGGA GCCA TCCG TTTTAGTATTATTGG LCK_00685 725020 - 726333 + | GTP-binding protein engA TERM 917 726622 - 726609 - g 79 -6.7 -4.55295 | opp_overlap 726608 726614 GGTTTGACAAAGAAA GATGC TACG GCATC AGTTGATGCAGTATT hbsU 726549 - 726824 + | nucleoid DNA-binding protein TERM 918 726901 - 726925 + F 77 -5 -5.11836 | opp_overlap 726892, overlap 726892 726890 TAATAAGCATACTTG GAGTAAGCTC TTAAT GGGTTTGCTC TTTTATTTTACATAT LCK_00687 727001 - 727249 + | hypothetical protein TERM 919 727262 - 727283 + F 100 -11.7 -5.15634 | opp_overlap 727262 TAATTATTATAAAAA GCCTAATCA GATC TGATTAGGC TTTTTTGATGCGCTG TERM 920 727283 - 727262 - f 100 -11.7 -4.94902 | opp_overlap 727262 TAATTATTATAAAAA GCCTAATCA GATC TGATTAGGC TTTTTTGATGCGCTG LCK_00688 727381 - 728214 + | aldo/keto reductase LCK_00689 728336 - 728563 + | hypothetical protein TERM 921 728577 - 728598 + F 100 -14.5 -5.4148 | AAGCAGTGACGTCAA GGCCATCTC TTAA GAGATGGCC TTTTTTAGTTGTTTA LCK_00690 728714 - 729976 + | TPR repeat-containing protein TERM 922 730646 - 730622 - g 79 -11.5 -2.72166 | overlap 730603 730621 730619 CCTTGAAGCAAATAG GCCGCAATCTT GAA AAGATTGCGGT TGAGCGTATTCGCGT papL 730057 - 731268 + | tRNA nucleotidyltransferase/poly(A) polymerase folA 731255 - 731755 + | dihydrofolate reductase LCK_00693 731764 - 732615 + | DegV family protein TERM 923 732611 - 732659 + F 100 -16.4 -3.34705 | opp_overlap 732617 732622, overlap 732617 732622 TATTATATCGTGCAC GTTAAATAAAACCCAAAACGGT GAAAA ATCGTTTTGGGTTTTATTTTGC TCATTTTTCTGCTAT TERM 924 732617 - 732653 + F 100 -16.2 -4.45077 | opp_overlap 732617 732622, overlap 732611 732622 ATCGTGCACGTTAAA TAAAACCCAAAACGGT GAAAA ATCGTTTTGGGTTTTA TTTTGCTCATTTTTC TERM 925 732653 - 732617 - f 100 -14 -3.60098 | opp_overlap 732617 732611 732622, overlap 732622 ATCGTGCACGTTAAA TAAAACCCAAAACGGT GAAAA ATCGTTTTGGGTTTTA TTTTGCTCATTTTTC TERM 926 732622 - 732648 + F 100 -11.7 -5.14626 | opp_overlap 732617 732622, overlap 732617 732611 GCACGTTAAATAAAA CCCAAAACGGT GAAAA ATCGTTTTGGG TTTTATTTTGCTCAT TERM 927 732648 - 732622 - f 100 -9.5 -4.88918 | opp_overlap 732622 732617 732611, overlap 732617 GCACGTTAAATAAAA CCCAAAACGGT GAAAA ATCGTTTTGGG TTTTATTTTGCTCAT TERM 928 732712 - 732698 - f 73 -8.6 -3.16914 | overlap 732697 AGCATTTATCAAAAG CAACAC AAT GTGTTG GACTAGTTCGGAAAC TERM 929 732757 - 732744 - f 74 -3.1 -5.31275 | overlap 732745 TCCTAGGATAAAAAA CCAAG TAAC CTTGA AAGGTAGGAGAGATA LCK_00694 732773 - 733768 + | inosine-uridine nucleoside N-ribohydrolase TERM 930 734014 - 734024 + G 72 -3.2 -5.02323 | CAAATGACAACAGCG CTAG TCT CTGG TTTTATTTATCGTCG LCK_00695 733765 - 734310 + | phosphate/sulphate permease TERM 931 734518 - 734544 + F 100 -12.4 -5.38958 | GCTTTTCGAGGCTGA GTCACTAGGTGA GCA TCACTTAGTGGC TTTTTATTTGTCAAT TERM 932 734578 - 734606 + F 100 -16.2 -5.75342 | opp_overlap 734578 TGACTATTTAGAAAA TCGTACTAGGTG AACTG CACCTAGTACGA TTTTTTTTGGAGGAA TERM 933 734606 - 734578 - f 100 -16.2 -4.43844 | opp_overlap 734578 TGACTATTTAGAAAA TCGTACTAGGTG AACTG CACCTAGTACGA TTTTTTTTGGAGGAA tkt 734626 - 736563 + | transketolase aroE 736567 - 737412 + | shikimate 5-dehydrogenase aroF 737396 - 738391 + | 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase TERM 934 739398 - 739386 - g 100 -4.8 -6.02345 | opp_overlap 739386 TAACGATAAAAAAAA TCGC GGTGG GCGA TTAAATTTAGTTGTA aroB 738421 - 739503 + | 3-dehydroquinate synthase aroC 739531 - 740709 + | chorismate synthase aroA 740744 - 742039 + | 3-phosphoshikimate 1-carboxyvinyltransferase tyrA 742036 - 742878 + | prephenate dehydrogenase TERM 935 743253 - 743243 - g 70 -8.2 -3.72742 | opp_overlap 743243 743242 CGACTATTAATAGAA GGCC AGC GGCC GTTATTACAAGAAAA aroK 742886 - 743689 + | shikimate kinase LCK_00704 743686 - 744240 + | hypothetical protein aroD 744237 - 745121 + | 3-dehydroquinate dehydratase TERM 936 745108 - 745166 + T 100 -9.5 -4.64861 | gap 3, opp_overlap 745126, overlap 745108 745109 745126 ATGAATTATTACAAG C-TTGGC--AAAAATAAAAAAGACGTGC AAACTC GCACGTCTTTTTTATTTTTCAGCTAACG TTTCTTTTGAGGCAG TERM 937 745108 - 745165 + T 81 -9.7 -3.38435 | gap 2, opp_overlap 745126, overlap 745108 745109 745126 ATGAATTATTACAAG CTTGGC--AAAAATAAAAAAGACGTGC AAACTC GCACGTCTTTTTTATTTTTCAGCTAAC GTTTCTTTTGAGGCA TERM 938 745109 - 745164 + T 87 -13.2 -2.62579 | gap 2, opp_overlap 745126, overlap 745108 745108 745126 TGAATTATTACAAGC TTGGC--AAAAATAAAAAAGACGTGC AAACTC GCACGTCTTTTTTATTTTTCAGCTAA CGTTTCTTTTGAGGC TERM 939 745145 - 745126 - T 100 -10 -5.93252 | opp_overlap 745109 745108 745108 745126 GGCAAAAATAAAAAA GACGTGCA AACT CGCACGTC TTTTTTATTTTTCAG TERM 940 745126 - 745145 + T 100 -9.3 -5.93252 | opp_overlap 745126, overlap 745109 745108 745108 GGCAAAAATAAAAAA GACGTGC AAACTC GCACGTC TTTTTTATTTTTCAG LCK_00706 745347 - 745150 - | hypothetical protein TERM 941 747236 - 747216 - g 73 -8.3 -3.64299 | opp_overlap 747189, overlap 747212 TAGATGATAAAGCAA CGTTGGCAT TAT ATGCCAAGG GTGATACTAATGGTG TERM 942 748673 - 748661 - g 70 -2.7 -5.04385 | opp_overlap 748666, overlap 748666 GAGATTTTTAAAAAA CATCA TGG TGATA ATCCTATCATCATTC dnaE 745475 - 748816 + | DNA polymerase III, alpha subunit TERM 943 748932 - 748920 - g 84 -7.7 -4.81083 | overlap 748928 TTTAACCATGAAAAA GACGA AAA TCGTC TCAACACTTGGTCCG TERM 944 749560 - 749544 - g 85 -7.3 -4.87133 | ACTTTTGAAAGAAAA GAACATG GAA CACGTTC AAATTATTCCTAAGA TERM 945 749998 - 749981 - g 72 -9.9 -3.08173 | opp_overlap 749961, overlap 749986 ATGAATCTGATTCAA CTGAAGC TGTT GCTTCAG CTGTCACACGTATTG pyk 748912 - 750333 + | pyruvate kinase TERM 946 750344 - 750361 + F 95 -8.5 -5.74122 | opp_overlap 750344 TATAATGGTTTCAAA GACTACA GAAG TGTAGTC TTTTTTTATGTCATC TERM 947 750361 - 750344 - f 77 -8.5 -3.56099 | opp_overlap 750344 TATAATGGTTTCAAA GACTACA GAAG TGTAGTC TTTTTTTATGTCATC amt 750477 - 751673 + | ammonium transporter TERM 948 751675 - 751686 + F 100 -7.2 -5.80817 | opp_overlap 751674 751675 TAACAGTGGAATAAC GGGC ATTA GCCC TTTTTTTGTGTTAAA TERM 949 751970 - 751956 - g 73 -8.6 -3.63195 | opp_overlap 751956 751964, overlap 751952 TAAACATCAAATCAA TCTGTC GCC GACAGA TGTCGTTAGTGCCGT phoH 751702 - 752721 + | phosphate starvation-inducible protein PhoH, ATPase LCK_00711 752724 - 753206 + | metal-dependent hydrolase TERM 950 753617 - 753632 + G 70 -2.6 -5.0809 | ATATATGGCGTCAGT TTGGTA TTGT TACTAA TTTTTCTGATTTGTT dgkA 753190 - 753666 + | diacylglycerol kinase era 753736 - 754647 + | GTP-binding protein Era recO 754706 - 755500 + | DNA repair protein RecO ansB 755500 - 756462 + | L-asparaginase/ Glu-tRNAGln amidotransferase subunit D TERM 951 756559 - 756589 + T 80 -4.8 -5.24129 | gap 1, opp_overlap 756586, overlap 756558 AAATATATAAAAAAA GCGCTTCG-CCTA TTAATT TAGGATGAAGTGC TTTTTTGTGAGCACC plnI 757416 - 756649 - | PlnI LCK_00717 757979 - 758830 + | hypothetical protein LCK_00718 758827 - 759153 + | hypothetical protein TERM 952 759305 - 759334 + F 83 -10.9 -3.03771 | opp_overlap 759304, overlap 759305 TGGTGCCTGAGTAAG GTGTTGGCAAAAA CACT TTTTTGTCGACAC TGTTAGAGGGTGTAC TERM 953 759305 - 759320 + F 74 -3.3 -5.24531 | opp_overlap 759304, overlap 759305 TGGTGCCTGAGTAAG GTGTT GGCAAA AACAC TTTTTTGTCGACACT TERM 954 759469 - 759489 + G 76 -6.9 -4.34345 | AAATAAGATATATTT TGTTGACTA GTT TAGTCACCA TTTTAGTAGTATGTG LCK_00719 759450 - 760298 + | hypothetical protein TERM 955 760322 - 760369 + T 81 -11 -2.6675 | gap 1, opp_overlap 760322 760336, overlap 760321 760336 TGTCAGTGGTTAATA TGTCTAACAAAAAAGGCACAT CTAACTA ATGTGCCTT-TTTGTTAGAAA CTTACTTATGAGATA TERM 956 760369 - 760322 - T 84 -11.7 -3.03124 | gap 1, opp_overlap 760322 760321 760336, overlap 760336 TGTCAGTGGTTAATA TGTCTAACAAAAAAGGCACATC TAACT AATGTGCC-TTTTTGTTAGAAA CTTACTTATGAGATA TERM 957 760336 - 760356 + T 88 -6.9 -5.06816 | opp_overlap 760322 760336, overlap 760322 760321 ATGTCTAACAAAAAA GGCACAT CTAACTA ATGTGCC TTTTTGTTAGAAACT TERM 958 760356 - 760336 - T 93 -7.6 -5.45652 | opp_overlap 760336 760322 760321, overlap 760322 ATGTCTAACAAAAAA GGCACATC TAACT AATGTGCC TTTTTGTTAGAAACT LCK_00720 760925 - 760371 - | hypothetical protein LCK_00721 762485 - 761124 - | aspartokinase thrB 763365 - 762490 - | homoserine kinase TERM 959 762855 - 762866 + g 70 -3.6 -4.90869 | CAGGTAAAGCATTTC TGGC TTCA GCCG TTTTTAATTCATAAT hom 764648 - 763362 - | homoserine dehydrogenase TERM 960 764693 - 764708 + H 82 -3.3 -5.59534 | AATACTATCATTTTT CTTCA TAATTT TGAAG TTTTTTGTTATAATT TERM 961 765020 - 765042 + G 74 -4.9 -4.7033 | overlap 765024 CTGAGGACATTGTGT CATATCATC AAGCC GATGATTTG TTTTATATTGAATTA TERM 962 765024 - 765038 + G 74 -4.3 -4.88163 | overlap 765020 GGACATTGTGTCATA TCATC AAGCC GATGA TTTGTTTTATATTGA thrC 764755 - 766215 + | threonine synthase glyA 766331 - 767563 + | Serine hydroxymethyltransferase TERM 963 767572 - 767585 + F 93 -8.1 -5.47159 | opp_overlap 767572 TGAATAATATAATCA GCTGG GTTA CCAGC TTTTTTATATTGGAG fthC 767608 - 768141 + | 5-formyltetrahydrofolate cyclo-ligase TERM 964 768175 - 768145 - T 95 -8.5 -4.9934 | gap 1, opp_overlap 768145 768173 ATAACAGTATAAAAA GCACATG-TAATCT GATA AGATCAGCATGTGC TTTTTTAGCATTTCA TERM 965 768145 - 768175 + T 84 -6.3 -5.12707 | gap 1, opp_overlap 768145, overlap 768173 ATAACAGTATAAAAA GCACATG-TAATCT GATA AGATCAGCATGTGC TTTTTTAGCATTTCA LCK_00727 768487 - 768188 - | hypothetical protein TERM 966 768269 - 768289 + g 76 -3.2 -5.24531 | overlap 768271 GATAATTTCGTGATA GCGCTGTT CTGAT AACGGCTC TTTTTTATCAAAAGT lytH 769389 - 768487 - | N-acetylmuramoyl-L-alanine amidase ackA2 769548 - 770795 + | acetate kinase TERM 967 772631 - 772620 - g 81 -3 -5.5604 | GCAACCAAGAAAAAA TTGA CTTA TCAA GAAAAAAAAGAGTGG LCK_00730 770952 - 772832 + | ABC transporter ATPase TERM 968 772833 - 772856 + F 100 -12.6 -5.16472 | ATCGTTGAGGGATAG GCAGATGATT AATC AATCATCTGC TTTTTTAGCGTTTTT LCK_00731 772904 - 773773 + | Rossmann fold nucleotide-binding protein involved in DNA uptake TERM 969 775732 - 775715 - g 76 -7 -4.43877 | CAATTGTTAAAGAAA TTGGGC TTTTGT GCCCAA AATGTCACAAAGGAC topA 773815 - 775908 + | DNA topoisomerase I TERM 970 775915 - 775950 + F 100 -12.1 -5.37043 | opp_overlap 775915 ACAGACTAAGATTAA GTTCTCACAATGTCA ATACCA TGACATTATGAGAAC TTTTTTCTCTAGCAT TERM 971 775950 - 775915 - f 100 -14.3 -3.41309 | opp_overlap 775915 ACAGACTAAGATTAA GTTCTCACAATGTCA ATACCA TGACATTATGAGAAC TTTTTTCTCTAGCAT LCK_00733 776111 - 776542 + | phosphotransferase system, mannose/fructose-specific component IIA LCK_00734 776557 - 777051 + | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB LCK_00735 777077 - 777934 + | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC LCK_00736 777936 - 778775 + | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID TERM 972 778848 - 778834 - g 70 -2.9 -5.06585 | CAAAGGATATAAAAA TGAAA TTATC TTTCA ACGGCAGATGATTCG LCK_00737 778793 - 779092 + | SNF family Na(+)-dependent transporter TERM 973 779108 - 779164 + T 100 -14 -5.28778 | gap 1 CTTGAAATTGTTTGA CATCTTGTTTTTACGGCCAGCACCAGT TTAT ATTGGTGTTGGCTGTT-GAGCAAGATG TTTTTTATCGGTAAT TERM 974 779190 - 779217 + T 73 -7.1 -3.98649 | overlap 779192 GTAATCAAGTAAGGT TTTGCCATTCT TTTTTT AGAATGGCATA TTGTTGTGTGTTCTC TERM 975 779192 - 779215 + T 82 -9.7 -3.56668 | overlap 779190 AATCAAGTAAGGTTT TGCCATTCT TTTTTT AGAATGGCA TATTGTTGTGTGTTC LCK_00738 779724 - 779179 - | acetyltransferase LCK_00739 779981 - 781171 + | aminotransferase TERM 976 781205 - 781181 - T 83 -5.8 -5.19328 | opp_overlap 781183, overlap 781168 781183 ATCTGATAATAAAAA CACACACTAA TGCTG TTAGTGTGTT TTTATTATCAAGCGA TERM 977 781203 - 781183 - T 81 -8.4 -4.22377 | opp_overlap 781183, overlap 781181 781168 CTGATAATAAAAACA CACACTAA TGCTG TTAGTGTG TTTTTATTATCAAGC TERM 978 781183 - 781203 + T 100 -9.1 -5.18726 | opp_overlap 781181 781168 781183 CTGATAATAAAAACA CACACTAAT GCT GTTAGTGTG TTTTTATTATCAAGC LCK_00740 782085 - 781213 - | transcription regulator TERM 979 781581 - 781591 + g 73 -5.4 -4.60648 | opp_overlap 781581 GTTTAAAGTTAGAAG GTGT GAC ACAC TTTATTTCATCTTTT LCK_00741 782309 - 783034 + | dehydrogenase TERM 980 784123 - 784145 + G 100 -12.8 -4.23054 | TCTTCAGATGACGTA TCGTTGGCAT TTT ATGCCAGCGA TTTTAGGTAGTCTAT LCK_00742 783059 - 784822 + | major facilitator superfamily permease TERM 981 784902 - 784873 - f 72 -5.1 -4.68593 | gap 1 CGTATGATTTAAAAA GGTATTGCGA-TGA TTA TCAATCACAATTCC ATGTTGAGTACAGGT TERM 982 785036 - 785057 + F 100 -11.7 -4.89477 | CAGTTCGATTGTAGT GTCGCAAAT TGCT ATTTGCGAC TTTTGTTGTTGAAAG dnaG 785080 - 786942 + | DNA primase DnaG rpoD 786982 - 788280 + | DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) TERM 983 788295 - 788311 + F 100 -8.7 -5.89921 | opp_overlap 788295 ATAATAGTGCAAGAA GTCACGT ATA ACGTGGC TTTTTTTATTGTGCT LCK_00745 788389 - 788946 + | hypothetical protein TERM 984 788986 - 789007 + G 81 -7.3 -4.62471 | gap 1, opp_overlap 788986 AAAATATCTTATTAA CCGGTG-CTG CTT CAGGCATCGG TTTTTCGCAATTAGA LCK_00746 788949 - 789683 + | dehydrogenase LCK_00747 789747 - 790319 + | Uracil-DNA glycosylase TERM 985 791051 - 791033 - g 76 -2.4 -5.47218 | opp_overlap 791033, overlap 791034 GTTGAGTCAAAAAAA CTCTCTTT TCA AAAGGGAA TGGCTTATTTTGCGA LCK_00748 790583 - 791377 + | transport protein TERM 986 791406 - 791439 + T 100 -19.8 -4.46514 | opp_overlap 791406 TATCATAAATGAAAA GCAGTGCCAGCAAT AAAAAA ATTGCTGGCACTGC TTTATTTAGATGAAT TERM 987 791439 - 791406 - T 100 -19.8 -4.63479 | opp_overlap 791406 TATCATAAATGAAAA GCAGTGCCAGCAAT AAAAAA ATTGCTGGCACTGC TTTATTTAGATGAAT LCK_00749 792551 - 791445 - | di- and tricarboxylate transporter TERM 988 792491 - 792481 - G 81 -5.4 -5.07652 | TGCCCGAAAATAAAA GCAA TAA TTGC TAGGAATAGGGTAAT mleR 793540 - 792653 - | transcriptional regulator TERM 989 793520 - 793541 + g 72 -3.1 -5.0809 | gap 1 TAATGCATTGTAGTA CAT-TAAGTC ATT GACTTGCATG TTTTTATCCTTTATT mleS 793686 - 795314 + | malolactic enzyme TERM 990 795629 - 795618 - g 76 -4.4 -5.13741 | TTAATGCAACAAAAA CGTT TATG AACG ATAACGGGTTGTTGG LCK_00752 795329 - 796606 + | Na+:citrate symporter TERM 991 796625 - 796648 + F 95 -9 -5.22794 | ATATTTGACTTTTGA CGATATAATC TTAC GGTTATATCG TTTTTTCATGGTTAT LCK_00753 796737 - 797285 + | oxidoreductase TERM 992 797312 - 797333 + T 95 -5.8 -6.17184 | opp_overlap 797312 GTCATTCACAAAAAA GCCAATGC GGTTGA GCATAGGC TTTTTTTTTCATCAT TERM 993 797333 - 797312 - T 84 -5.8 -5.28176 | opp_overlap 797312 GTCATTCACAAAAAA GCCAATGC GGTTGA GCATAGGC TTTTTTTTTCATCAT LCK_00754 798179 - 797352 - | transcriptional regulator TERM 994 798113 - 798135 + g 78 -7.6 -4.41817 | opp_overlap 798113 CGATTAGCGCACCAA GCTTGGCTTG AGA CATGCCACGC TTTTGCCTTGTTTTA LCK_00755 798467 - 799516 + | threonine dehydrogenase gpo 799599 - 800075 + | glutathione peroxidase TERM 995 800422 - 800446 + G 77 -6.4 -4.57341 | opp_overlap 800426 800427 TCAGAAGCTTATTTA GCAATTGACG AGAAA CGTCAGCTGC TTTTTGCGGCAAATT LCK_00757 800125 - 801174 + | 3-carboxymuconate cyclase TERM 996 801267 - 801215 - f 93 -7.9 -5.46657 | gap 1, opp_overlap 801215 CACTTGAATAAAAAA GCCGCAGCGCCTTTAATGGTAATT GTCTAA AACAACCAT-AAAGGAACTGCGAC TCATGACTAGTTTAT tnpA1 801270 - 802187 + | transposase TERM 997 802236 - 802213 - f 79 -8.2 -4.06904 | opp_overlap 802213 CTACCTAATGATAAA CGACTTGTAT CCGT ATGCAAGTCG TTTTTTTGTATTGAT TERM 998 802213 - 802236 + F 100 -10.4 -5.82172 | opp_overlap 802213 CTACCTAATGATAAA CGACTTGTAT CCGT ATGCAAGTCG TTTTTTTGTATTGAT LCK_00759 802352 - 804376 + | K+ transporter LCK_00760 804505 - 805749 + | transcriptional regulator TERM 999 805814 - 805841 + G 81 -7.2 -4.64591 | gap 1, opp_overlap 805820, overlap 805820 805822 ATATTTTCATCATTT CAAAATCGCCGAT TCT ATCGGT-ATTTTG TTTTGTCTGTCATTA TERM 1000 805820 - 805836 + G 75 -2.9 -5.24647 | opp_overlap 805820, overlap 805814 805822 TCATCATTTCAAAAT CGCCGAT TCT ATCGGTA TTTTGTTTTGTCTGT TERM 1001 805822 - 805834 + G 77 -7.7 -4.22673 | opp_overlap 805820, overlap 805820 805814 ATCATTTCAAAATCG CCGAT TCT ATCGG TATTTTGTTTTGTCT TERM 1002 806608 - 806619 + G 70 -3 -5.08824 | TGCTGTAATTCATTT TATG GAGT CATA TTTTTTACATCCGCA LCK_00761 805793 - 806788 + | permease TERM 1003 806811 - 806826 + F 93 -5.4 -6.09888 | ATAATTTGTTTACAG CGTACA TTAT TGTGCG TTTTTTTTATTGACA TERM 1004 807030 - 807056 + F 71 -3 -5.09895 | opp_overlap 807032 807034, overlap 807032 807034 GAGAAGATTTAAAAT AATAGACTTAGC TAG GATAAGTCTGTC TTTTTTGAATCGATC TERM 1005 807085 - 807109 + F 80 -5 -5.31275 | opp_overlap 807085 TCTAAATACTTTAAA CCCGATGT TAATAAAAT ACGTCGGG TTTTTTGTCCTGAAC TERM 1006 807619 - 807603 - g 73 -8.7 -3.64103 | opp_overlap 807599 807603, overlap 807604 TATGTACAGTTGAAA CTAGCGG AGT CCGCTAA TCACTTTGTGGCGTC TERM 1007 807618 - 807604 - g 73 -10 -2.7814 | opp_overlap 807603 807599, overlap 807603 ATGTACAGTTGAAAC TAGCGG AGT CCGCTA ATCACTTTGTGGCGT ribD 807141 - 808184 + | riboflavin biosynthesis protein RibD ribE 808169 - 808768 + | riboflavin synthase, alpha subunit TERM 1008 808804 - 808794 - g 71 -6.8 -4.10453 | CAAAGCGTGCGAAAA GCAG TTA CTGC CCTAAAACAAGGCGC TERM 1009 809699 - 809679 - g 70 -3.4 -4.84359 | gap 1 GGACTCGCAGAAAAA CTG-AAAAC GTAT GTTTTGCAG GAAAATAATTATGAT TERM 1010 809829 - 809812 - g 78 -7.1 -4.32402 | GTCTAACGAAAATAA GATTGTT GACC AACAATC CAGATAAAATCAATC ribA 808758 - 809960 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase ribH 809984 - 810457 + | 6,7-dimethyl-8-ribityllumazine synthase TERM 1011 810476 - 810517 + F 82 -7.6 -4.62054 | opp_overlap 810481, overlap 810481 TATTGGTTATAATTT TAAAATATCTGATTTAAG CGTATA CTTAAACCAGATATTTTC TTTTGCTTTAATTGG TERM 1012 810481 - 810512 + F 89 -7.5 -5.22258 | opp_overlap 810481, overlap 810476 GTTATAATTTTAAAA TATCTGATTTAAG CGTATA CTTAAACCAGATA TTTTCTTTTGCTTTA TERM 1013 810512 - 810481 - f 100 -10.4 -4.21936 | opp_overlap 810476 810481 GTTATAATTTTAAAA TATCTGATTTAAGC GTAT ACTTAAACCAGATA TTTTCTTTTGCTTTA LCK_00766 810544 - 811779 + | ATPase TERM 1014 812005 - 812018 + G 79 -3.1 -5.5112 | ATTAGACCGGTTAAA GTGTC GCTG GATAC TTTTTTCTTGATACA apbE 811819 - 812745 + | thiamine biosynthesis lipoprotein TERM 1015 813421 - 813408 - g 87 -3.1 -5.74122 | gap 1, opp_overlap 813408, overlap 813400 813409 GATGATATAAAAAAA GCC-CA GTC TGAGGC TTTTTCTTGGGATGA TERM 1016 813408 - 813421 + G 72 -3.1 -5.08601 | gap 1, opp_overlap 813400 813408 813409 GATGATATAAAAAAA GCC-CA GTC TGAGGC TTTTTCTTGGGATGA LCK_00768 812835 - 813443 + | flavoprotein TERM 1017 814447 - 814437 - g 81 -5.4 -5.03145 | opp_overlap 814437 TAATGGTCCAAAAAA GCAT GTT ATGC ATTATTACCAGGCGA LCK_00769 813433 - 814680 + | flavoprotein TERM 1018 814726 - 814697 - f 95 -13.1 -3.78351 | opp_overlap 814702, overlap 814702 ATAAATTGGATTAAA CAAAAGGAGCAAA GTAT TTTGCTCCTTTTA TGGTGAAAATATGAT TERM 1019 814702 - 814721 + F 100 -10.8 -4.4648 | opp_overlap 814702 814697 TTGGATTAAACAAAA GGAGCAAA GTAT TTTGCTCC TTTTATGGTGAAAAT TERM 1020 814721 - 814702 - f 100 -10.8 -4.93877 | opp_overlap 814702, overlap 814697 TTGGATTAAACAAAA GGAGCAAA GTAT TTTGCTCC TTTTATGGTGAAAAT msrB 815012 - 815443 + | peptide methionine sulfoxide reductase msrB TERM 1021 815550 - 815564 + G 85 -4.2 -5.60689 | overlap 815551 TGCTTGTTGTCTTAG CGGTTG TTA CAACCA TTTTTTATTATCTGC TERM 1022 815551 - 815563 + G 73 -7.7 -3.94787 | overlap 815550 GCTTGTTGTCTTAGC GGTTG TTA CAACC ATTTTTTATTATCTG TERM 1023 815712 - 815735 + G 82 -8.2 -4.48987 | TAGATCGTTACATTT CAGAACTTGG ATTC TCAGGTTCTG TTTTGGTTGTAAAAG TERM 1024 815862 - 815852 - g 81 -5.4 -5.1244 | GGATCAACACAAAAA GCAA TGA TTGC GACAGCTATTCTACA LCK_00771 815498 - 816622 + | putative penicillin-binding protein TERM 1025 816631 - 816656 + F 71 -3.3 -5.02715 | overlap 816619 TAACTAAATTAAAAA CATACTAGTGA TTTT TTGCTGGTGTG TTTTTAATTTGATGT LCK_00772 816800 - 817045 + | hypothetical protein LCK_00773 817070 - 817624 + | hypothetical protein LCK_00774 817641 - 817835 + | small integral membrane protein LCK_00775 817862 - 818377 + | hypothetical protein TERM 1026 818408 - 818429 + T 95 -5.9 -6.17184 | opp_overlap 818409, overlap 818409 TTCTTATCCCAAAAA TGACATGTT ACAT AGCATGTCG TTTTTTTTTAATGGT TERM 1027 818409 - 818428 + T 78 -7.2 -4.2787 | opp_overlap 818409, overlap 818408 TCTTATCCCAAAAAT GACATGTT ACAT AGCATGTC GTTTTTTTTTAATGG LCK_00776 818898 - 818437 - | transcriptional regulator LCK_00777 819007 - 819606 + | putative NADPH-quinone reductase (modulator of drug activity B) LCK_00778 819689 - 820663 + | U61 family peptidase LCK_00779 820784 - 820993 + | hypothetical protein TERM 1028 821021 - 821064 + F 95 -15 -2.8984 | opp_overlap 821022 821027, overlap 821027 GTTTTCATTGTAATA ATAAAAGTCACTAAATACTG TCAT TAGTATTTAGTGACTTTTAA ATTGTTGGTATTGTA TERM 1029 821063 - 821022 - f 100 -17.8 -3.65046 | opp_overlap 821021 821027, overlap 821027 TTTTCATTGTAATAA TAAAAGTCACTAAATACT GTCATT AGTATTTAGTGACTTTTA AATTGTTGGTATTGT TERM 1030 821027 - 821058 + F 100 -14 -4.36729 | opp_overlap 821027 821022, overlap 821021 ATTGTAATAATAAAA GTCACTAAATACTG TCAT TAGTATTTAGTGAC TTTTAAATTGTTGGT TERM 1031 821058 - 821027 - f 100 -13.3 -4.90079 | opp_overlap 821021 821027, overlap 821022 ATTGTAATAATAAAA GTCACTAAATACT GTCATT AGTATTTAGTGAC TTTTAAATTGTTGGT LCK_00780 821102 - 822115 + | lipase, putative TERM 1032 822228 - 822193 - f 76 -6.5 -4.56159 | GTAACAAAACATAAA TTCAAATAATAATTA ATATTG TAATTTTTATTTGAA TAATAATAATGCGAA TERM 1033 822325 - 822299 - g 70 -2.5 -5.17576 | gap 1 TATCAATGCAAAAAA CAACTATAAAAC ATAT GTTTT-TAATTG CAGCAACATTAGCCA TERM 1034 822820 - 822810 - g 70 -5.4 -4.31549 | overlap 822807 TAAAATTCAAAATAA TGGT ATT ACCA CAGAATGGATTCACT LCK_00781 822289 - 823014 + | hypothetical protein TERM 1035 823036 - 823055 + F 100 -9.4 -5.61596 | opp_overlap 823039 AGATAATTGCTTTAA TCAGGAAA AGAT TTTCCTGA TTTTTTTGTAGGCAT TERM 1036 823814 - 823840 + G 79 -3.1 -5.4148 | TCGACGTTATTTTTG GGAAAAGAGTA GGGAA TACTTTTTTAC TTTTTTGCTTATTTA TERM 1037 823872 - 823889 + G 71 -7.1 -3.79678 | GCCAACTTATCTCAT GCAATTT ACAC AAATTGC TTATTCTGACACGTT LCK_00782 823264 - 824853 + | hypothetical protein LCK_00783 824858 - 825322 + | histone acetyltransferase HPA2 TERM 1038 825420 - 825401 - f 89 -12.2 -3.19003 | opp_overlap 825401 ATAACATCCTATCAA GACATGCG ATTG CGCATGTC TTTTAATTTTGATGT TERM 1039 825401 - 825420 + F 100 -12.2 -4.71222 | opp_overlap 825401 ATAACATCCTATCAA GACATGCG ATTG CGCATGTC TTTTAATTTTGATGT LCK_00784 825796 - 827022 + | transporter, putative TERM 1040 827125 - 827104 - T 84 -5.9 -5.31059 | opp_overlap 827090 ATAGCAAGTAAAAAA GACCAAGTT TGAG AACTCAGTC TTTTTTATTAGACTA LCK_00785 827402 - 827142 - | hypothetical protein TERM 1041 827284 - 827265 - G 88 -7.8 -5.03961 | opp_overlap 827268 AAGTAAACAAGAAAA GGCAGCAA CCAG TGGCTGCC AAGGTTGCCCTTTGT LCK_00786 827581 - 828456 + | dehydrogenase ymgK1 828521 - 829366 + | aldo/keto reductase TERM 1042 829382 - 829398 + F 95 -6.6 -5.93252 | GGTGTAGACAATTTG GAGACT TTGAC AGTCTC TTTTTTATTTTTCCC TERM 1043 829917 - 829931 + G 83 -3.5 -5.58454 | TATTTATCAAAGTTT TCGTG GCCCA CGCGA TTTTTTTAATCTGAA TERM 1044 830529 - 830541 + G 80 -6.3 -4.79451 | TCATGGCATACTACC TGAAG ACC CTTCA TTTTATGTTTACAAT LCK_00788 829489 - 830973 + | phytoene dehydrogenase crtM 830973 - 831860 + | phytoene/squalene synthetase LCK_00790 831891 - 832394 + | Cof family protein LCK_00791 832890 - 833138 + | hypothetical protein TERM 1045 833391 - 833335 - T 100 -25.8 -3.23611 | opp_overlap 833341 833353, overlap 833337 833341 833353 AAAAAAGCGGATTAA TATTAATGTAACAAAAAAGCACAACG ACTAA CGTTGTGCTTTTTTGTTACATTAATG CAGACAAACTATTGG TERM 1046 833389 - 833337 - T 100 -28.4 -3.16689 | opp_overlap 833341 833353, overlap 833335 833341 833353 AAAAGCGGATTAATA TTAATGTAACAAAAAAGCACAACG ACTAA CGTTGTGCTTTTTTGTTACATTAA TGCAGACAAACTATT TERM 1047 833341 - 833385 + T 100 -24.8 -3.14132 | opp_overlap 833341 833337 833335 833353, overlap 833353 GCGGATTAATATTAA TGTAACAAAAAAGCACAACG ACTAA CGTTGTGCTTTTTTGTTACA TTAATGCAGACAAAC TERM 1048 833385 - 833341 - T 100 -24.8 -3.39449 | opp_overlap 833341 833353, overlap 833337 833335 833353 GCGGATTAATATTAA TGTAACAAAAAAGCACAACG ACTAA CGTTGTGCTTTTTTGTTACA TTAATGCAGACAAAC TERM 1049 833373 - 833353 - T 100 -11.2 -5.5074 | opp_overlap 833341 833353, overlap 833341 833337 833335 TAATGTAACAAAAAA GCACAACG ACTAA CGTTGTGC TTTTTTGTTACATTA TERM 1050 833353 - 833373 + T 100 -11.2 -5.5074 | opp_overlap 833353 833341 833337 833335, overlap 833341 TAATGTAACAAAAAA GCACAACG ACTAA CGTTGTGC TTTTTTGTTACATTA mscL1 833876 - 833400 - | large-conductance mechanosensitive channel TERM 1051 833963 - 833942 - R 80 -5.1 -5.31855 | TAGTAACAATAAAAA TGACCACCA TATT CGATGGCCA TTCATTAACATGTTT LCK_00793 834797 - 834081 - | GntR family transcriptional regulator TERM 1052 834910 - 834883 - H 100 -10.2 -4.32857 | opp_overlap 834870 834890 TGTTGTAAATATAAA TATATAATTTGT ATTG ACAAATTATATA AAAGCGAGATAATAC TERM 1053 834931 - 834941 + H 76 -4 -5.24129 | GAGATAATACGTGTA TAAG TTA CTTA TTTTTTATGCGGAGG LCK_00794 834966 - 836366 + | Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase TERM 1054 837519 - 837534 + G 73 -5.4 -4.58663 | overlap 837512 GCCATGGACGACACC GCCGTT GCTT AATGGC TTTTTGGCAACTGGT ptcC1 836356 - 837657 + | phosphotransferase system cellobiose-specific component IIC TERM 1055 837711 - 837726 + G 73 -7.6 -4.00868 | TGCTATGTTGCGCAG CTGGTA TGAG TACCAG TTTACTTGTGAATAA LCK_00796 837677 - 837994 + | putative cellobiose-specific phosphotransferase system, enzyme IIB TERM 1056 838088 - 838039 - T 100 -16.9 -5.24129 | gap 1, opp_overlap 838042 838050 838057, overlap 838024 838041 838044 838057 TTGTGTTACAAAAAA TATAA-CACAAACAAAAAACGCCA AAA CGGCGTTTTTTGTTTGTGACTACA TTGAATATTCATCGT TERM 1057 838086 - 838041 - T 100 -17.3 -4.25873 | gap 1, opp_overlap 838042 838050 838057, overlap 838024 838039 838044 838057 GTGTTACAAAAAATA TAA-CACAAACAAAAAACGCCA AAA CGGCGTTTTTTGTTTGTGACTA CATTGAATATTCATC TERM 1058 838042 - 838084 + T 100 -15.1 -2.57067 | opp_overlap 838024 838041 838039 838044 838057, overlap 838050 838057 TGTTACAAAAAATAT AACACAAACAAAAAACGCC AAAAC GGCGTTTTTTGTTTGTGAC TACATTGAATATTCA TERM 1059 838082 - 838044 - T 100 -22.8 -4.23386 | opp_overlap 838042 838050 838057, overlap 838024 838041 838039 838057 TTACAAAAAATATAA CACAAACAAAAAACGCCA AAA CGGCGTTTTTTGTTTGTG ACTACATTGAATATT TERM 1060 838050 - 838076 + T 100 -13.9 -3.93583 | opp_overlap 838044 838041 838039 838057, overlap 838042 838057 AAAATATAACACAAA CAAAAAACGCC AAAAC GGCGTTTTTTG TTTGTGACTACATTG TERM 1061 838057 - 838069 + T 88 -6.2 -5.72622 | opp_overlap 838044 838041 838039 838057, overlap 838050 838042 AACACAAACAAAAAA CGCC AAAAC GGCG TTTTTTGTTTGTGAC TERM 1062 838069 - 838057 - T 100 -6.9 -5.7827 | opp_overlap 838057 838050 838042, overlap 838044 838041 838039 AACACAAACAAAAAA CGCCA AAA CGGCG TTTTTTGTTTGTGAC LCK_00797 839475 - 838084 - | Na+:melibiose symporter and related transporter agl1 841216 - 839516 - | Alpha-glucosidase TERM 1063 839981 - 839992 + g 72 -4.4 -4.83169 | TAGCATGTCATTTGA GGTT GCCA AACC TTTTTCTAGCACGGT TERM 1064 840059 - 840036 - G 81 -11.2 -3.02511 | opp_overlap 840034 840034 TTGATTGCTTCAACA TCACGATATT GTGA AATATCGTGA AAGTTATCATTATTG TERM 1065 840215 - 840188 - G 74 -9.2 -3.57263 | gap 1, opp_overlap 840188 AGCTTTATTGCCAAA CCAGGATACAGCC CTT GGCTG-ATCATGG TTACTCCAATACAAA TERM 1066 840188 - 840215 + g 70 -9.2 -3.16564 | gap 1, opp_overlap 840188 AGCTTTATTGCCAAA CCAGGATACAGCC CTT GGCTG-ATCATGG TTACTCCAATACAAA TERM 1067 841369 - 841340 - R 85 -8.9 -4.18401 | opp_overlap 841340, overlap 841343 TTATATAGCTTAAAA TAATAAAATGCAA GCGC TTACATTTTATTA TTTATCATTTATTGG TERM 1068 841340 - 841369 + r 71 -6.7 -4.20981 | opp_overlap 841340 841343 TTATATAGCTTAAAA TAATAAAATGCAA GCGC TTACATTTTATTA TTTATCATTTATTGG TERM 1069 841428 - 841405 - R 100 -12.6 -5.38047 | opp_overlap 841405 GATGTATACAAAAAA GTGATTACCA TTGC TGGTAATCAC TTCTAAAATCTTTAG TERM 1070 841405 - 841428 + r 93 -12.6 -3.38218 | opp_overlap 841405 GATGTATACAAAAAA GTGATTACCA TTGC TGGTAATCAC TTCTAAAATCTTTAG LCK_00799 842836 - 841466 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase:pyridine nucleotide-disulphide oxidoreductase dimerisation region LCK_00800 843647 - 842955 - | HAD superfamily hydrolase LCK_00801 843753 - 844409 + | cyclic AMP receptor protein, putative yceH 844513 - 845637 + | YceH yceG 845618 - 846478 + | YceG TERM 1071 846571 - 846583 + GF 80 -9.1 -3.68351 | opp_overlap 846570 846569 TTGCACCGGAGAATG CTGCG GCT CGCAG TTTCAGTGGTGGGAG LCK_00804 846387 - 847055 + | hypothetical protein TERM 1072 847082 - 847101 + F 100 -9.4 -5.73978 | opp_overlap 847086 GTCTAATTATGCTTA GAAACGAT GACT ATCGTTTC TTTTTTATTTGTGAT gshR3 847225 - 848556 + | glutathione reductase TERM 1073 848580 - 848561 - f 74 -2.1 -5.39755 | opp_overlap 848568, overlap 848568 GACAACTATAAAAAA TCAAGAG GCGCCT CTCATGA TAATGACAAGGTGCT TERM 1074 848568 - 848594 + F 74 -2.3 -5.43866 | gap 1, opp_overlap 848561 848568, overlap 848592 848593 ATAAAAAATCAAGAG GCGCC-TCTCAT GATA ATGACAAGGTGC TTTTTTTAAGCGTTA dapE 848657 - 849901 + | succinyl-diaminopimelate desuccinylase TERM 1075 849959 - 849982 + F 95 -6.8 -5.83211 | opp_overlap 849959 ATTTTAACCGTTAAA GAATACTGTT TTAA AGCAGTGTTC TTTTTTATTTTCATG TERM 1076 850263 - 850296 + G 100 -14.9 -3.80573 | opp_overlap 850273, overlap 850265 850273 TGTCCATTTTTGTGC TGCAGATAAATAACC AGTT GGTTATTTATCTGTA TTTGATCCTAATGGC TERM 1077 850265 - 850294 + G 100 -15.3 -3.48738 | opp_overlap 850273, overlap 850263 850273 TCCATTTTTGTGCTG CAGATAAATAACC AGTT GGTTATTTATCTG TATTTGATCCTAATG TERM 1078 850751 - 850740 - g 70 -3 -5.03961 | opp_overlap 850740 AATCAAAGAAGAAAA TGAT TCTT ATCA TGTCTGGTGGCCAAG LCK_00807 850088 - 851149 + | integral membrane protein LCK_00808 851174 - 851581 + | hypothetical protein TERM 1079 852198 - 852210 + G 74 -6.3 -4.40333 | opp_overlap 852196 852198 ACTATTTTATCAACA TTGCT CGT AGCAA TTTATATTATTTGCC LCK_00809 851646 - 853496 + | putative glycerophosphodiester phosphodiesterase TERM 1080 853554 - 853521 - f 75 -6.9 -4.09519 | opp_overlap 853531, overlap 853531 ATCATTTATAAATAA TTACTAAAAAGACAC TTAT GTGTCTTTTTTTTAA TGTCAAAAATCATTT TERM 1081 853531 - 853544 + F 95 -6.7 -5.90981 | opp_overlap 853521 853531 AATAATTACTAAAAA GACAC TTAT GTGTC TTTTTTTTAATGTCA TERM 1082 853544 - 853531 - f 83 -6.7 -4.83593 | opp_overlap 853531, overlap 853521 AATAATTACTAAAAA GACAC TTAT GTGTC TTTTTTTTAATGTCA TERM 1083 853589 - 853564 - f 80 -6.3 -4.66833 | opp_overlap 853564 853566, overlap 853567 TTTTAATGTCAAAAA TCATTTAGTAA ACAT TGACTAAATGA TTACTAAACATTATA galK 853642 - 854826 + | galactokinase TERM 1084 854844 - 854824 - g 70 -2.5 -5.0538 | overlap 854827 GGTGAGGTGAAAAAA TGACAACTG CAG CTGTTGTGA GTGGCTTTGTACAGC TERM 1085 855098 - 855109 + G 72 -4.4 -4.72486 | CAGTACACCCAGTCG CGTT AATC AACG TTTTTGGCATTTATA galT 854823 - 856298 + | galactose-1-phosphate uridylyltransferase galP 856396 - 857802 + | Sodium:galactoside symporter TERM 1086 857842 - 857866 + G 73 -10 -2.75957 | overlap 857862 GCGCAAATTTTAGCA CGCCGCGATT GGGAA AATCTCGGCG TGATTGCCGTTAATC TERM 1087 859129 - 859142 + G 71 -6.7 -4.10007 | TTGACACGTATGGTG TTGCG TGAT CGCAA TTTTCCGGCCATTAT lacZ1 857812 - 859386 + | Beta-galactosidase/beta-glucuronidase lacZ2 859420 - 860844 + | Beta-galactosidase small chain LCK_00815 860857 - 861897 + | galactose mutarotase TERM 1088 861904 - 861930 + F 100 -11.8 -5.67283 | opp_overlap 861898 861909 CAAAAATAATCTTCT TAAGACAATACT TTA AGTGTTGTCTTA TTTTTTGTTTGAATT TERM 1089 862100 - 862089 - g 76 -7.2 -4.21631 | opp_overlap 862089 AAGTTACTGAACAAA CGCG CCAA CGCG TTATTGAGGTGGCTA TERM 1090 862153 - 862142 - g 81 -5.8 -5.17576 | TATCAATTGAAAAAA TCGG GTCG CCGA ACTGCTGCTCACCAT LCK_00816 861989 - 863014 + | GalR LCK_00817 864532 - 863120 - | transport protein TERM 1091 865234 - 865218 - g 83 -12.3 -2.73854 | opp_overlap 865215 865211, overlap 865215 865213 GATGAAATTATATTA CCGGCAT TCT ATGCCGG CGGTAAGTTGTAACC LCK_00818 864642 - 865247 + | transcriptional regulator LCK_00819 865714 - 866289 + | hypothetical protein TERM 1092 866290 - 866319 + F 95 -8.7 -5.69262 | opp_overlap 866290 866293 GGGATCATCGCATAA GAACCGACACTTT TCGA AAATTGTTGGTTC TTTTTATTTTTCTCC LCK_00820 866539 - 867417 + | putative integral membrane protein TERM 1093 867624 - 867612 - g 75 -7.7 -4.13767 | GTTGCCACTCGAAAA TGCCA AAG TGGCA TTAGCAGAAACTAGA LCK_00821 867430 - 868302 + | hypothetical protein TERM 1094 868373 - 868386 + F 89 -6.7 -5.66989 | opp_overlap 868371 868365 868373 AAAAGAACGATAACA GGCAA GCAA TTGCC TTTTTTTGATGTTTA LCK_00822 868686 - 868967 + | hypothetical protein TERM 1095 869151 - 869118 - T 73 -4 -5.1286 | gap 1, opp_overlap 869118, overlap 869109 TAAAAATTAGAAAAA GCATTCTAACGA-GC CCATT ACGTCTTTAGAATGC CTTTTTGATATATGA TERM 1096 869454 - 869473 + T 100 -10 -5.01546 | ACGGGTTTGCTAGGA GTCGCAGT TGAT GCTGCGAC TTTTTCTATACGTTT LCK_00823 870091 - 869558 - | hypothetical protein TERM 1097 869767 - 869753 - G 74 -5 -4.77438 | AGCTAGCATTAAAAA GATACT ATA AGTACC ACCAACCATCTCGGT LCK_00824 871587 - 870100 - | transport protein TERM 1098 871407 - 871394 - G 72 -4.5 -4.67234 | AGCCAACTTGAAAAA GGTAC TGCT GCACC GGTAGCTAACATATA LCK_00825 871700 - 872299 + | transcriptional regulator LCK_00826 872954 - 872421 - | acetyltransferase fabI 873298 - 874053 + | enoyl-[acyl-carrier-protein] reductase (NADH) TERM 1099 874099 - 874139 + F 81 -7.6 -4.28994 | opp_overlap 874099 874101, overlap 874100 AATAAGTAACAATAA TAGGCGCTCCAATAATTT GCGAA AATTTCTTGGAGCGCCCG TTTTAATCACTAATG TERM 1100 874139 - 874099 - f 76 -7.6 -4.05931 | opp_overlap 874099 874100, overlap 874101 AATAAGTAACAATAA TAGGCGCTCCAATAATTT GCGAA AATTTCTTGGAGCGCCCG TTTTAATCACTAATG TERM 1101 874100 - 874138 + F 73 -8.9 -3.16914 | opp_overlap 874099 874101, overlap 874099 ATAAGTAACAATAAT AGGCGCTCCAATAATTT GCGAA AATTTCTTGGAGCGCCC GTTTTAATCACTAAT TERM 1102 874137 - 874101 - f 95 -12.4 -3.60112 | opp_overlap 874100 874099, overlap 874099 TAAGTAACAATAATA GGCGCTCCAATAATTT GCGAA AATTTCTTGGAGCGCC CGTTTTAATCACTAA LCK_00828 874265 - 874870 + | hypothetical protein TERM 1103 874908 - 874887 - T 88 -7.4 -5.0916 | opp_overlap 874887 TGTGCAACATAAAAA GCGTTATT TTAATC AATAACGC TTTTTAATCGAGCAA TERM 1104 874887 - 874908 + T 83 -7.4 -4.72272 | opp_overlap 874887 TGTGCAACATAAAAA GCGTTATT TTAATC AATAACGC TTTTTAATCGAGCAA LCK_00829 875850 - 874972 - | alpha/beta superfamily hydrolase/acyltransferase TERM 1105 875700 - 875717 + g 85 -7.1 -4.96468 | opp_overlap 875699 875702 TAAAACTATCAAATC CATTGAT TATC ATCAATG TTTTGTTTGCGTTTG LCK_00830 876250 - 876795 + | transcriptional regulator rimL 876953 - 877522 + | GCN5-related N-acetyltransferase TERM 1106 877583 - 877618 + F 100 -18 -3.56594 | opp_overlap 877587, overlap 877587 877616 GGCGGCATAGTTTTT TAAACACGATACAAAT TAAA ATTTGTATCGTGTTTA TTTGAAACGATTTAA TERM 1107 877587 - 877614 + F 100 -14.4 -4.41616 | opp_overlap 877587, overlap 877583 GCATAGTTTTTTAAA CACGATACAAAT TAAA ATTTGTATCGTG TTTATTTGAAACGAT TERM 1108 877614 - 877587 - f 100 -14.4 -3.55071 | opp_overlap 877583 877587 GCATAGTTTTTTAAA CACGATACAAAT TAAA ATTTGTATCGTG TTTATTTGAAACGAT TERM 1109 878664 - 878653 - g 72 -4.4 -4.77173 | CGTTCACAAAATAAA CAGA CAAC TCTG GTGAGTTTATTTATT LCK_00832 877744 - 879057 + | nucleotidyltransferase/DNA polymerase involved in DNA repair LCK_00833 879050 - 879421 + | hypothetical protein TERM 1110 879580 - 879607 + G 87 -3.5 -5.75342 | gap 1, opp_overlap 879580 GCACGCATACGACAA GCACAATCACAA ACTTA TGGTGAT-GTGC TTTTTTTTAACAAAG LCK_00834 879424 - 879795 + | membrane-fusion protein pspB 879871 - 881682 + | glucosyltransferase-S TERM 1111 881707 - 881728 + F 100 -9.5 -5.72207 | opp_overlap 881706 881707 881709 ATAGATATAATTAAT CACTCATGA TTTT TCATGGGTG TTTTTTTGCTTTCAA TERM 1112 883067 - 883080 + F 87 -2.4 -6.01187 | opp_overlap 883067 883061 TTTATTGAACAAAAA GACA TTGATT TGTC TTTTTTTATTTGGTT TERM 1113 883352 - 883407 + F 74 -6.3 -4.30995 | GAGTCTGTAGAATAA TAAGCATAAGGTTTGATATGGGAGT TGAAAT ACCTCTGTAACATACCTTGTGCTTA TTATTTTGTCAAAAA TERM 1114 883492 - 883474 - f 100 -11 -6.04378 | opp_overlap 883488 AAAGCACAAAAAAAA GACCAGCC AAT GGCTAGTC GATGTCGATTATGTA TERM 1115 884754 - 884739 - g 78 -2.6 -5.5208 | overlap 884741 CTACAACAGAAAAAA TACAAA AATA TTTGCA GAATTAATCACAGTA TERM 1116 885173 - 885159 - g 78 -2.8 -5.4505 | overlap 885132 885161 TTCTTCAAGAAAAAA CACAGA CAT TCTCTG GATAAAAAATTTTTC LCK_00838 884146 - 886032 + | ABC transporter, ATP-binding protein-related protein LCK_00839 886272 - 887570 + | ATP-binding protein TERM 1117 887564 - 887554 - f 76 -4 -5.32396 | ATATGAAAAATAAAA TTGA GGT TCAA AATTAATGCATCCTG TERM 1118 888410 - 888369 - g 77 -8.3 -3.95817 | GAATAGTTAACGAAA CATCATTATCTTATTCTTT AAGC AAAGATAAAAATAATGATG AAGTTATCAATGATT LCK_00840 887570 - 888487 + | hypothetical protein TERM 1119 888665 - 888693 + F 93 -7.5 -5.60993 | ATTATTAAAATTGTA GCAAATGGAACAT ACA AAGTTCTGTTTGC TTTTTTTATAAAGAA LCK_00841 888726 - 889508 + | hypothetical protein TERM 1120 889538 - 889557 + F 80 -5 -5.37865 | AGTAGAAAGGTTAAA GGCTGATT AAAC AATCGGTC TTTTTTAGTTGTTAC LCK_00842 889586 - 889786 + | hypothetical protein TERM 1121 889863 - 889849 - g 70 -3.6 -4.87318 | overlap 889850 TGCAAAATTCAAAAA CGTATA AAT TATACA AATCTGGTAAGCTCT LCK_00843 889833 - 890846 + | SKN1 domain-containing protein LCK_00844 890941 - 891696 + | transport protein LCK_00845 891708 - 892298 + | ABC-type multidrug transport system, ATPase component TERM 1122 892309 - 892320 + F 93 -4.4 -6.09888 | opp_overlap 892309 TGTAATTTTTTGAAA CATG GAAA CATG TTTTTTTTATTGAAA TERM 1123 892482 - 892503 + G 86 -4.5 -5.41941 | AAGGTACGTAAGATA GTTCTATTA TTTT TAATAGGGC TTTTTATTTACTTTA LCK_00846 892368 - 893315 + | hypothetical protein LCK_00847 893327 - 893554 + | hypothetical protein TERM 1124 893666 - 893695 + G 79 -5.1 -5.0916 | opp_overlap 893672, overlap 893669 TTGCTGGTGTATTGG CAATCACAGCA GTGTTCGA TGCTGTGATTA TTTTTGTGTTCAAAC TERM 1125 893669 - 893692 + G 79 -6.8 -4.63863 | opp_overlap 893672, overlap 893666 CTGGTGTATTGGCAA TCACAGCA GTGTTCGA TGCTGTGA TTATTTTTGTGTTCA LCK_00848 893560 - 893934 + | major facilitator superfamily permease LCK_00849 894081 - 894380 + | hypothetical protein LCK_00850 894373 - 894657 + | integral membrane protein LCK_00851 894744 - 895310 + | alanyl-tRNA synthetase TERM 1126 895319 - 895339 + F 79 -4 -5.45802 | TAAATAAGTGATAGG CACTTGCA TTATT TGTAGGTG TTTTTATTTTAGAAA TERM 1127 895390 - 895409 + G 88 -4.2 -5.76633 | TTTATACTTGGTTTG GCAGTTCT AGTC GGGGCTGC TTTTTTTGTATCTAC LCK_00852 895366 - 897435 + | peptide ABC transporter permease TERM 1128 898367 - 898357 - g 73 -5.4 -4.6468 | CTAAAGGATATAAAA CTGA TAG TCAG CCACATGTTAGTTGG LCK_00853 897432 - 898574 + | surface antigen LCK_00854 898590 - 899114 + | hypothetical protein TERM 1129 899429 - 899418 - g 81 -3 -5.58074 | TAATGATCAAAAAAA TCAA TTAT TTGA TAGTGGACTAGATGC LCK_00855 899104 - 899670 + | hypothetical protein TERM 1130 899776 - 899801 + G 83 -3.3 -5.54907 | ATCAATAGTGTATTA CCAGTCATT TTGTTATT AGTGGCTGG TTTTTATTTTATACC LCK_00856 899680 - 900141 + | Thiol-disulfide isomerase or thioredoxin LCK_00857 900173 - 902677 + | ATP-dependent serine protease LCK_00858 902695 - 903018 + | hypothetical protein TERM 1131 903209 - 903199 - f 74 -3.2 -5.27938 | AGTTTGAAAGAAAAA TAGC AAT GCCA CTAATTATGTTGATA LCK_00859 903450 - 903812 + | hypothetical protein LCK_00860 903815 - 904069 + | hypothetical protein TERM 1132 904457 - 904484 + G 87 -4.9 -5.43974 | AGTGATCAGTATTTG GCAAAGACTTT ATTTAA AAGGACTTTGC TTTTTGTTTGGTTTT LCK_00861 904421 - 905806 + | DNA segregation ATPase FtsK/SpoIIIE LCK_00862 905796 - 906107 + | hypothetical protein TERM 1133 906174 - 906202 + F 84 -6.1 -5.25893 | AATAGCGTTATTTGA TGTTTGTGAATTT TGA GATTTCACAAGCA TTTTTTAGTCTCTAT LCK_00863 906398 - 906694 + | hypothetical protein TERM 1134 906710 - 906751 + F 73 -7.3 -4.07124 | GTAACTATTGTTAAA GCTCTAGTCTTTTACAGCA AATG TCCTGTGAGAGACCGGGGC TTTATGTACATAGTG TERM 1135 906856 - 906801 - f 72 -8.3 -3.35849 | gap 3, opp_overlap 906805, overlap 906799 906803 TCGACCAAAGGAAGA GACAGTG-CCACG--CCCAGCCCTAGCG TAG CGTTGGGGCTGGGTGCGTGGTCGCTGTT AAGCAAATGCAAAGC TERM 1136 906854 - 906803 - f 86 -10.9 -3.24202 | gap 3, opp_overlap 906805, overlap 906801 906799 GACCAAAGGAAGAGA CAGTG-CCACG--CCCAGCCCTAGCG TAG CGTTGGGGCTGGGTGCGTGGTCGCTG TTAAGCAAATGCAAA TERM 1137 906805 - 906852 + F 93 -14.3 -3.02511 | gap 3, opp_overlap 906803 906801 906799 CCAAAGGAAGAGACA GTG-CCACGC--CCAGCCCTAGCG TAG CGTTGGGGCTGGGTGCGTGGTCGC TGTTAAGCAAATGCA TERM 1138 906954 - 906919 - f 90 -8.4 -5.19261 | gap 1, overlap 906921 AAAGTCACCAAAAAA GCTTTAA-CCCCCAGTT ACT AACAGGGGGGTTAAACC GGTAAAAACGCTGAA TERM 1139 906952 - 906921 - f 76 -9.6 -2.80873 | gap 1, overlap 906919 AGTCACCAAAAAAGC TTTAA-CCCCCAGTT ACT AACAGGGGGGTTAAA CCGGTAAAAACGCTG TERM 1140 906973 - 906963 - f 76 -6.8 -4.64657 | overlap 906964 TTAAACCGGTAAAAA CGCT GAA AGCG TCAACCCAATATGGG LCK_00864 907081 - 908709 + | transcriptional regulator LCK_00865 908706 - 908864 + | hypothetical protein TERM 1141 909158 - 909185 + G 84 -2.1 -5.75342 | gap 1, opp_overlap 909158 GCTAAAATTAGACAA GCACAATCTC AAACCTACG GAGAT-GTGC TTTTTTTTAACAAAG LCK_00866 908963 - 909370 + | membrane-fusion protein TERM 1142 909611 - 909625 + G 71 -4.2 -4.99435 | opp_overlap 909611 TTTTTTTTGATGATA GCCAAT TTT ATAGGC TTTTTAATTGTTGCA TERM 1143 910588 - 910598 + G 70 -5.4 -4.35524 | overlap 910580 TGAGATGGTGGGGAG TGTG ACC CACA TTTTACCTTTAGCAC LCK_00867 909419 - 910951 + | chloride channel protein EriC TERM 1144 910981 - 910956 - f 100 -12.7 -4.8143 | opp_overlap 910956 TCAAGAATTGAAAAA CGACTCTGAAA AATT TTCCAGAGTCG TTTTTATTTAACTTC TERM 1145 910956 - 910981 + F 100 -10.5 -5.33026 | opp_overlap 910956 TCAAGAATTGAAAAA CGACTCTGAAA AATT TTCCAGAGTCG TTTTTATTTAACTTC TERM 1146 911715 - 911695 - f 80 -4.7 -5.30155 | opp_overlap 911695 TGAGCAACTAAAAAA TGACGGA TAATTAG TCCGCCA TTCGATATTTGATCG TERM 1147 912424 - 912442 + F 77 -8.8 -3.54741 | CAAGGTTGGATTTTT GCCCTTTG AAT CGAGGGGC TTTACAAAAATGGTG TERM 1148 913154 - 913137 - g 77 -4.9 -4.87626 | TCTTAATACTAAAAA TAGAGAA AAAG CTCTCTA TAAATATCCTGAAGA LCK_00870 913027 - 913188 + | K+ transporter Trk precursor LCK_00871 913238 - 914296 + | hypothetical protein TERM 1149 914702 - 914682 - g 80 -4.7 -5.30155 | opp_overlap 914682 TGAGCAACTAAAAAA TGACGGA GAATTAG TCCGCCA TTCAATATTTGATCG LCK_00872 914338 - 915306 + | IS30 family transposase TERM 1150 915342 - 915356 + T 91 -5.7 -5.89921 | overlap 915338 AAATAATGAACTTTA GACAC TAGAT GTGTC TTTTTTTGTTGTGCT TERM 1151 915909 - 915895 - T 86 -5 -5.74122 | opp_overlap 915895 TATGACACAAAAAAA GACTAA TCA CTAGTC TTTATGTTAGCTTAT tnpA3 917202 - 915943 - | IS30 family transposase TERM 1152 917350 - 917338 - R 70 -2 -5.38249 | ACTAATTATAAAAAA TTGA AATCA TCAA GCGAATTATTAACAT LCK_00874 917699 - 917328 - | hypothetical protein LCK_00875 918109 - 917699 - | membrane-fusion protein TERM 1153 917914 - 917887 - G 84 -2.1 -5.75342 | gap 1, opp_overlap 917887 CTTTGTTAAAAAAAA GCAC-ATCTC CGTATGTTT GAGATTGTGC TTGTCTGATTTTAGC TERM 1154 918171 - 918154 - R 89 -6.3 -5.58454 | opp_overlap 918154 TTTAGATTAAAAAAA GCCAAAT ATTT ATCTGGC TTTTTAAACGTCTAA resA 920709 - 918175 - | Type III restriction enzyme, res subunit LCK_00877 922538 - 920706 - | site-specific DNA-methyltransferase TERM 1155 922251 - 922261 + g 73 -5.4 -4.62471 | TCCATCTTTTTTCCA CTCT ATT AGAG TTTTTAAAACTTGCA TERM 1156 922794 - 922805 + r 81 -5.8 -4.87786 | opp_overlap 922794 922793 ATTTTTACCTAAAAT GGCA AATT TGCC TTTTTCTCAAATTCA LCK_00878 924460 - 922787 - | transcriptional regulator TERM 1157 924604 - 924624 + r 93 -9.7 -4.17089 | CTTCTGCCCTTTAAC CCCCCTGTT AGT AAGAGGGGG TTTTAGAAATTTAAG TERM 1158 924839 - 924806 - R 72 -4.7 -4.7497 | gap 1 TCTATGTACTAAAAA GCTCGCTAATG-GT TGATTGT ACGCATCAGCAAGC TCTTTACTACCCCTA LCK_00879 925158 - 924862 - | hypothetical protein LCK_00880 925336 - 926232 + | abortive phage resistance protein LCK_00881 926717 - 926391 - | hypothetical protein LCK_00882 928087 - 926717 - | DNA segregation ATPase FtsK/SpoIIIE TERM 1159 926859 - 926869 + g 72 -3.2 -5.03994 | AAATCATTTGATAGT GGGT GGA ACTC TTTTTGTGTATCAGG TERM 1160 928051 - 928024 - G 100 -4.9 -5.70761 | AAAACAAAATAAAAA GCAAAGTCCTT TTAAAT AAAGTCTTTGC TAAATATTGATCACT TERM 1161 928131 - 928119 - R 71 -5.5 -4.62984 | overlap 928120 TTACCAGATAGAAAA CGACG ACA CGTCA AGCCACTACCAGCCA LCK_00883 928285 - 928100 - | hypothetical protein LCK_00884 928667 - 928410 - | hypothetical protein TERM 1162 928635 - 928646 + g 70 -3 -5.00884 | CAACACATTTTTTCG TATC ATTC GATA TTTTTTAAAAGCACT LCK_00885 929028 - 928660 - | hypothetical protein LCK_00886 929285 - 929088 - | hypothetical protein LCK_00887 931797 - 929299 - | ATP-dependent serine protease LCK_00888 932291 - 931830 - | Thiol-disulfide isomerase or thioredoxin TERM 1163 932180 - 932170 - G 83 -3.2 -5.54907 | GGTATAAAATAAAAA CCAG CCC CTAG TAACACAATGACTGG TERM 1164 932320 - 932333 + r 70 -3.9 -4.93595 | TGTATTTGATTGATT TTAAC TGAC GTTAA TTTTTGAGTTTTTAT LCK_00889 932867 - 932301 - | hypothetical protein TERM 1165 932846 - 932859 + g 71 -3.9 -4.93365 | GCAAACCCATAATGC TAAGT AAAA ACTTA TTTTTCATTATCGAA LCK_00890 933381 - 932857 - | hypothetical protein LCK_00891 934569 - 933397 - | surface antigen TERM 1166 934494 - 934470 - G 90 -7.2 -5.252 | TATCCTGATAAAAAA GTGCCATTAC GATAA GTAACAGCAC TAAGAAAAAAACTAA LCK_00892 936587 - 934569 - | peptide ABC transporter permease TERM 1167 935806 - 935818 + g 70 -2.7 -5.10601 | opp_overlap 935814, overlap 935807 935814 GGGCGAATGACTGCC TTTTC AAA GAAAG TTTTTCTAATTTTAT TERM 1168 936245 - 936235 - G 73 -5.4 -4.63044 | AGTGACATAAACAAA CTAG CAA CTAG ATGAGCCGAACTTAA TERM 1169 936637 - 936617 - R 100 -7.7 -5.80364 | opp_overlap 936617 936620 AGTGCAATAAAAAAA CACTTACAA GTT TTGTAAATG TTTGTTGTATCACTT LCK_00893 937217 - 936651 - | alanyl-tRNA synthetase LCK_00894 937721 - 937353 - | major facilitator superfamily permease LCK_00895 937950 - 937723 - | hypothetical protein LCK_00896 938913 - 937966 - | hypothetical protein LCK_00897 939968 - 938949 - | SKN1 domain-containing protein LCK_00898 940205 - 939987 - | hypothetical protein LCK_00899 942427 - 940283 - | aggregation substance precursor TERM 1170 941229 - 941254 + g 90 -9 -4.99861 | overlap 941217 941216 TAGGCTGCTTTTTTA GCAGCGTTTG CCTTAT CAACCGCTGC TTTTTGTGCTTCATA TERM 1171 942461 - 942443 - R 100 -11.8 -5.27938 | opp_overlap 942439 ATTTTTAAATAAAAA GGCTACTA ATT TAGTAGCC TACCCTTTCTCTCAA LCK_00900 942673 - 942473 - | hypothetical protein LCK_00901 943540 - 942752 - | hypothetical protein LCK_00902 943728 - 943567 - | hypothetical protein LCK_00903 943933 - 943721 - | hypothetical protein TERM 1172 943861 - 943822 - G 82 -11 -3.48807 | gap 1, opp_overlap 943830, overlap 943825 TGAGCAAACCCATAA GACCATGTCGCTCATTAAA CCA TTTAATAAGCGTCATG-TC GGTAGATAACAAATT TERM 1173 943859 - 943825 - G 91 -13.8 -2.57996 | opp_overlap 943830, overlap 943822 GCAAACCCATAAGAC CATGTCGCTCATTAAA CCA TTTAATAAGCGTCATG TCGGTAGATAACAAA TERM 1174 943888 - 943913 + g 79 -5.5 -4.91473 | overlap 943890 AATTTTCATCATCTA TGCTAAACCTG TGTT TAGATTTAGCA TTTATTTTTAAATTA LCK_00904 945208 - 944015 - | putative restriction-modification enzyme type I S subunit hsdM 946796 - 945201 - | Type I restriction-modification system, M subunit LCK_00906 949870 - 946796 - | Type IC restriction subunit TERM 1175 950122 - 950099 - R 91 -5.4 -5.95539 | TTTGAAATAAAAAAA CAAAAACAGA TTTC TCCATTTTTG CTCTAGTCATTATAA LCK_00907 951024 - 950182 - | metal-dependent membrane protease TERM 1176 951487 - 951510 + r 100 -9.6 -4.7373 | AAACGGGTTTGCTAG GAGCCATAGT TTGT GCTGTGGCTC TTTTTCATACACTCA TERM 1177 951648 - 951633 - R 73 -4 -5.20333 | opp_overlap 951612, overlap 951612 951646 TACTGACAATAAAAA CAGTTC TGCT AAACTG TGGCTCACAGGAATA TERM 1178 951658 - 951646 - R 71 -7.7 -3.54307 | overlap 951633 AACAGTTCTGCTAAA CTGTG GCT CACAG GAATAAACACTGCAG LCK_00908 953495 - 951870 - | aspartate/tyrosine/aromatic aminotransferase TERM 1179 953749 - 953760 + r 76 -4.4 -5.14563 | AGCAACCTACATCTC TCGA CATG TCGA TTTTTTGATAACGGA TERM 1180 953962 - 954000 + r 93 -5.4 -5.97575 | opp_overlap 953962 TTCAATGTACAAGAA CCAATTTTACTTTCATTT CTT AAATGTTTGTGAAATTGG TTTTTTTTGTGCATT LCK_00909 954661 - 954218 - | histone acetyltransferase HPA2 LCK_00910 955734 - 954736 - | hypothetical protein TERM 1181 955331 - 955358 + g 85 -8.4 -4.37092 | opp_overlap 955331 955330 CTAGCGCCCCATAAG CCTATCCGATAG TTTG CATTCGGATAGG TTTTATGAACCCAGT LCK_00911 956131 - 955808 - | hypothetical protein LCK_00912 956723 - 956103 - | acetyltransferase LCK_00913 957076 - 956720 - | transcriptional regulator LCK_00914 957456 - 957043 - | MerR family transcriptional regulator TERM 1182 957554 - 957538 - R 73 -3.7 -5.19275 | AGTTAGAAAATAAAA CTGTATT AAA AATTCAG AGATGTTGATTTATC TERM 1183 957607 - 957588 - R 89 -7.9 -5.37043 | opp_overlap 957591 ATGTTACACAAAAAA GCACTAC CTTAAT GTAGTGC TTCCAATAAGAAATG TERM 1184 957700 - 957685 - R 77 -5.4 -5.00642 | opp_overlap 957685, overlap 957686 TAATTTACAGAAAAA CGTGTC ATTA GACACA CTGTTAATTCATTGA TERM 1185 957725 - 957753 + r 79 -9.1 -3.40878 | opp_overlap 957725, overlap 957723 CATTGAAAACAAAAA GTGTATTAAATAA TTT TGATTTAATACAC TCTTCTTGAAATGAT TERM 1186 957753 - 957725 - R 100 -9.1 -5.48213 | opp_overlap 957725 957723 CATTGAAAACAAAAA GTGTATTAAATAA TTT TGATTTAATACAC TCTTCTTGAAATGAT LCK_00915 960032 - 957798 - | hypothetical protein TERM 1187 958032 - 958050 + g 82 -6.1 -4.91511 | overlap 958029 CGGCCAGGCAGTTCG TGAAAAG ACGAC CTTTTCA TTTTTATCATGAGCT LCK_00916 960978 - 960010 - | glycosyltransferase TERM 1188 960884 - 960916 + g 80 -10.6 -3.38118 | opp_overlap 960882 960889, overlap 960889 960911 TTATTTTCAATCATT GACAACAGCAAGCC ATGTA GACGTGCTGTTGTC TTCTCGATAACTTCT LCK_00917 961801 - 960980 - | glycosyl transferase family protein TERM 1189 961269 - 961253 - G 75 -9.5 -3.32936 | overlap 961251 961249 TAAATCAACAACATA GGGATTT GAA AAATCCC AACCACCGCCTTGCT LCK_00918 962211 - 961801 - | GtrA-like protein TERM 1190 962351 - 962304 - R 83 -10.8 -2.981 | gap 1, opp_overlap 962314 962344 962347, overlap 962308 962309 CTGTAACCTATAAAC CAAAGTCGAACCACTTCACTCAT ATT ACTAGTAAAGTGGTTCG-CTATG CGATAGTTTTATAAG TERM 1191 962347 - 962308 - R 100 -10.2 -4.15669 | gap 1, opp_overlap 962314 962344, overlap 962304 962309 AACCTATAAACCAAA GTCGAACCACTTCACTCAT ATT ACTAGTAAAGTGGTTCG-C TATGCGATAGTTTTA TERM 1192 962347 - 962309 - R 80 -10.4 -3.08317 | opp_overlap 962314 962344, overlap 962308 962304 ACCTATAAACCAAAG TCGAACCACTTCACTCAT ATT ACTAGTAAAGTGGTTCGC TATGCGATAGTTTTA rfbA1 963253 - 962381 - | glucose-1-phosphate thymidylyltransferase TERM 1193 963015 - 962987 - G 71 -6.6 -4.08144 | opp_overlap 962988 963002 963005, overlap 962988 TTCACCAAGTATAAA TGCCTCTGCCAA TCCGT TCGGCTGAGGCT GTACTTTATATTGAA TERM 1194 963014 - 962988 - G 75 -10.1 -3.04404 | opp_overlap 962988 963002 963005, overlap 962987 TCACCAAGTATAAAT GCCTCTGCCAA TCCGT TCGGCTGAGGC TGTACTTTATATTGA ddpX 963449 - 964153 + | D-alanyl-D-alanine dipeptidase TERM 1195 964214 - 964158 - T 100 -27.3 -3.34013 | opp_overlap 964164 964168 964172 964176, overlap 964168 964172 964176 CACCTTTTTAATCAA TTTTAATCAATAAAGAAACGGTAATCA TTG TGATTACCGTTTCTTTATTGATTAATA GCCTGTCCCTGAACA TERM 1196 964164 - 964208 + T 100 -26.3 -3.17763 | opp_overlap 964158 964168 964172 964176, overlap 964168 964172 964176 TTTAATCAATTTTAA TCAATAAAGAAACGGTAATCA TTG TGATTACCGTTTCTTTATTGA TTAATAGCCTGTCCC TERM 1197 964204 - 964168 - T 100 -21.3 -3.37879 | opp_overlap 964168 964164 964172 964176, overlap 964158 964172 964176 ATCAATTTTAATCAA TAAAGAAACGGTAATCA TTG TGATTACCGTTTCTTTA TTGATTAATAGCCTG TERM 1198 964168 - 964204 + T 100 -21.3 -3.40371 | opp_overlap 964158 964168 964172 964176, overlap 964164 964172 964176 ATCAATTTTAATCAA TAAAGAAACGGTAATCA TTG TGATTACCGTTTCTTTA TTGATTAATAGCCTG TERM 1199 964200 - 964172 - T 100 -17.7 -4.32951 | opp_overlap 964172 964168 964164 964176, overlap 964168 964158 964176 ATTTTAATCAATAAA GAAACGGTAATCA TTG TGATTACCGTTTC TTTATTGATTAATAG TERM 1200 964172 - 964200 + T 100 -17.7 -4.34737 | opp_overlap 964168 964158 964172 964176, overlap 964168 964164 964176 ATTTTAATCAATAAA GAAACGGTAATCA TTG TGATTACCGTTTC TTTATTGATTAATAG TERM 1201 964176 - 964196 + T 100 -12.7 -4.73297 | opp_overlap 964172 964168 964158 964176, overlap 964172 964168 964164 TAATCAATAAAGAAA CGGTAATCA TTG TGATTACCG TTTCTTTATTGATTA TERM 1202 964196 - 964176 - T 100 -12.7 -4.73297 | opp_overlap 964176 964172 964168 964164, overlap 964172 964168 964158 TAATCAATAAAGAAA CGGTAATCA TTG TGATTACCG TTTCTTTATTGATTA lmrA 965953 - 964202 - | multidrug ABC exporter, ATP-binding or membrane-spanning/permease subunit TERM 1203 965063 - 965039 - G 70 -7.9 -3.74693 | overlap 965041 GCTCATTTCACTAAA TACAGTACCTA ACA TGGGTACTGCA CCAATCAAATTAAAA TERM 1204 965061 - 965041 - G 72 -8.3 -3.4582 | overlap 965039 TCATTTCACTAAATA CAGTACCTA ACA TGGGTACTG CACCAATCAAATTAA LCK_00922 966571 - 965999 - | transcriptional regulator TERM 1205 966707 - 966750 + r 100 -12.7 -4.64048 | opp_overlap 966717, overlap 966711 TATTTAGGCTCACTG ATTAGTAAAAGAACCTAGC GCTTCG GCTAGGTTCTTTTACTTAC TTTGTTTGTGTAATC TERM 1206 966711 - 966746 + r 100 -17.9 -3.80068 | opp_overlap 966717, overlap 966707 TAGGCTCACTGATTA GTAAAAGAACCTAGC GCTTCG GCTAGGTTCTTTTAC TTACTTTGTTTGTGT TERM 1207 966740 - 966717 - R 100 -11.1 -4.3129 | opp_overlap 966711 966707 CACTGATTAGTAAAA GAACCTAGC GCTTCG GCTAGGTTC TTTTACTTACTTTGT LCK_00923 967421 - 966747 - | ABC transporter ATP-binding protein TERM 1208 967068 - 967079 + g 70 -3 -5.0133 | AAATTGTTCGGTTTG CAAA TTAT TTTG TTTTTTAACACGATC LCK_00924 968487 - 967426 - | ABC transporter permease component ygfC 969015 - 968491 - | transcriptional regulator TERM 1209 969076 - 969033 - R 100 -18.6 -3.86897 | opp_overlap 969037 969038 969039 969047, overlap 969034 969037 TTTACTCCTTACAAA TTAATATGACACAATGTCAA TATA TTGACATTGTGTCATATTAG ACCAAAAAAGTCAAC TERM 1210 969075 - 969034 - R 100 -22.1 -2.91924 | opp_overlap 969037 969038 969039 969047, overlap 969033 969037 TTACTCCTTACAAAT TAATATGACACAATGTCAA TATA TTGACATTGTGTCATATTA GACCAAAAAAGTCAA TERM 1211 969072 - 969037 - R 100 -19.4 -3.6053 | opp_overlap 969037 969038 969039 969047, overlap 969034 969033 CTCCTTACAAATTAA TATGACACAATGTCAA TATA TTGACATTGTGTCATA TTAGACCAAAAAAGT TERM 1212 969039 - 969070 + r 100 -17.6 -3.01712 | opp_overlap 969037 969034 969033, overlap 969038 969037 969047 CCTTACAAATTAATA TGACACAATGTCAA TATA TTGACATTGTGTCA TATTAGACCAAAAAA TERM 1213 969120 - 969098 - R 84 -5.5 -5.52096 | opp_overlap 969098 969098 AAAGTCAACAAAAAA CGCGTGTCA GACAT TGCCACACG CGCGTTTTTTACTAT TERM 1214 969098 - 969124 + r 79 -4.2 -5.27779 | opp_overlap 969098, overlap 969098 AAAGTCAACAAAAAA CGCGTGTCAGAC ATT GCCACACGCGCG TTTTTTACTATTCAG LCK_00926 969563 - 969132 - | transcriptional regulator TERM 1215 969376 - 969389 + g 75 -8.1 -4.00042 | GATTTAGCTAATATT GGTGC AGCA GCACC TTGTTTCGTCACGAG LCK_00927 970482 - 969631 - | nucleoside-diphosphate-sugar epimerase TERM 1216 970148 - 970158 + g 71 -6.8 -4.08945 | GCCAGTGCACTAATC GCTG TTT CAGC TTTTGGGAAACTCGT TERM 1217 970540 - 970562 + r 77 -10 -3.05384 | opp_overlap 970540 970539 970537 970542, overlap 970534 970542 CAAGTAGTATAACAT CATGTTGTTT GTA AGACAACATG TTAAATAAAAAAACA TERM 1218 970601 - 970576 - R 100 -13.5 -5.95539 | opp_overlap 970576 TGTTAAATAAAAAAA CAAAGACTTAG AATA CTAAGTCTTTG TTTTTTATCAATAAT TERM 1219 970576 - 970601 + r 100 -13.5 -5.28778 | opp_overlap 970576 TGTTAAATAAAAAAA CAAAGACTTAG AATA CTAAGTCTTTG TTTTTTATCAATAAT LCK_00928 972294 - 970609 - | FAD/FMN-containing dehydrogenase TERM 1220 972551 - 972537 - R 88 -7.8 -4.84914 | opp_overlap 972535 972537 ACCGACATAATAAAA GACAGC ATT GCTGCC GTCTGGTTTATTTTA gnd 973999 - 972572 - | 6-phosphogluconate dehydrogenase, decarboxylating TERM 1221 974197 - 974250 + r 100 -13.1 -4.78326 | opp_overlap 974208, overlap 974203 974208 GAGGTTTACTAAAAA CTATATA-AAAACACCTATCTCATA AGTAAC TATGAGATAGGTGTTTTGTAT-TAG TTTGTTTATTTAACA TERM 1222 974203 - 974244 + r 100 -14.8 -3.46146 | opp_overlap 974208, overlap 974197 974208 TACTAAAAACTATAT AAAAACACCTATCTCATA AGTAAC TATGAGATAGGTGTTTTG TATTAGTTTGTTTAT TERM 1223 974239 - 974208 - R 100 -15.4 -5.07941 | opp_overlap 974208 974203 974197 AAAACTATATAAAAA CACCTATCTCATAA GTAA CTATGAGATAGGTG TTTTGTATTAGTTTG TERM 1224 974208 - 974239 + r 100 -14.7 -4.76274 | opp_overlap 974208, overlap 974203 974197 AAAACTATATAAAAA CACCTATCTCATA AGTAAC TATGAGATAGGTG TTTTGTATTAGTTTG cfa 975452 - 974256 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 1225 975290 - 975268 - G 74 -9.2 -3.48924 | TTACCGTCCATATAA GCCTCACCAA AGG TTAGTGAAGC ATGGGCCATAATATC pel 976849 - 975569 - | Pectate lyase precursor TERM 1226 975925 - 975909 - G 85 -8.7 -4.33274 | opp_overlap 975922 TGCACATCACCAAAA CGCACAC GGG GTGTACG CTGGACCGTATTTTG TERM 1227 977358 - 977338 - g 78 -3.9 -5.25772 | overlap 977341 AAAGTACAACAAAAA CATCAATGG CTT CCTTTGCTG CCGGCTTACCAGCCA LCK_00932 977112 - 977852 + | hypothetical protein TERM 1228 977859 - 977895 + T 100 -11.8 -4.371 | opp_overlap 977867, overlap 977867 CAGTCGTAACTTAAT TGTAAAAAGGTCACTC TTTGC GAGTGACCTTTTTTTA TTTTGCTGTCGTCGC TERM 1229 977867 - 977887 + T 100 -11.2 -6.11229 | opp_overlap 977867, overlap 977859 ACTTAATTGTAAAAA GGTCACTC TTTGC GAGTGACC TTTTTTTATTTTGCT TERM 1230 977887 - 977867 - T 100 -11.2 -4.67234 | opp_overlap 977859 977867 ACTTAATTGTAAAAA GGTCACTC TTTGC GAGTGACC TTTTTTTATTTTGCT ptcC2 978993 - 977893 - | cellobiose-specific PTS system IIC component TERM 1231 978999 - 978989 - G 76 -6.8 -4.4572 | AAGACTGCAAACAAA GCCA TGA TGGC AAATGAACCATTATA yidB 979219 - 979010 - | cellobiose-specific PTS system IIC component TERM 1232 979114 - 979130 + g 81 -6.6 -4.72986 | CAATAATGAATGGTA TGGGAT ACAAC ATCCCA TTTTTCATCGCAGTA pbg1 980140 - 979289 - | Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase TERM 1233 979739 - 979753 + g 80 -10 -3.62275 | AGCAACATCTTCATA GTCGGT ATA ACCGAC TTTAGGCTCATCAGT TERM 1234 979861 - 979875 + g 85 -5.7 -5.1861 | opp_overlap 979860 CTTCGGCTGTAATAT CTGGA CGATA TCCAG TTTTTTCGTAATAGG pbg2 980746 - 980168 - | Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase TERM 1235 980434 - 980424 - G 70 -3.2 -4.91511 | overlap 980425 ATCTCATCATAAAAA GCAA GGC CTGC CTCGTTAGGCTCAGC LCK_00937 981803 - 980871 - | orotate transporter TERM 1236 981742 - 981728 - G 76 -7.2 -4.14511 | opp_overlap 981727 AAGGTGATTTTAAAA CAAAAC CCA GTTTTG CGTTGATAGGACTTT TERM 1237 982221 - 982252 + G 73 -10.2 -2.80935 | opp_overlap 982218 GCTGTTCAAGTATTA CCGATGACATCCGA TAAA TCCGATGTCATCCG TATAGTCGATCACGT LCK_00938 982179 - 982484 + | hypothetical protein TERM 1238 982534 - 982491 - T 73 -8.4 -3.68324 | opp_overlap 982491 982502, overlap 982492 982502 TATCGCTAACAAACA TTAATAAAAAAGCACACC GCAGAATA GGTGTGCTTTTTTATTCG CTTTCAACTTTATCT TERM 1239 982491 - 982534 + T 79 -10.6 -2.84528 | opp_overlap 982491 982492 982502, overlap 982502 TATCGCTAACAAACA TTAATAAAAAAGCACACC GCAGAATA GGTGTGCTTTTTTATTCG CTTTCAACTTTATCT TERM 1240 982533 - 982492 - T 84 -11.9 -2.80512 | opp_overlap 982491 982502, overlap 982491 982502 ATCGCTAACAAACAT TAATAAAAAAGCACACC GCAGAATA GGTGTGCTTTTTTATTC GCTTTCAACTTTATC TERM 1241 982523 - 982502 - T 93 -7.3 -5.54885 | opp_overlap 982502 982491, overlap 982492 982491 AACATTAATAAAAAA GCACACC GCAGAATA GGTGTGC TTTTTTATTCGCTTT TERM 1242 982502 - 982523 + T 93 -7.3 -5.52096 | opp_overlap 982492 982491 982502, overlap 982491 AACATTAATAAAAAA GCACACC GCAGAATA GGTGTGC TTTTTTATTCGCTTT nox 983877 - 982528 - | NADH oxidase TERM 1243 983959 - 983946 - H 86 -5.3 -5.66229 | ATGAATAACAAAAAA TTGAC TCAT GTCAA GAAAGAGTGAAATAT flpA 983973 - 984617 + | FNR-like transcriptional regulator TERM 1244 984648 - 984619 - T 90 -11.7 -3.60627 | opp_overlap 984619 984625, overlap 984604 984625 TCACTTTATTGTAAA TAAAAAGAACTGC TTTA ACAGTTCTTTTTA TTTACAATCGCATCA TERM 1245 984619 - 984648 + T 89 -11 -3.60627 | opp_overlap 984604 984619 984625, overlap 984625 TCACTTTATTGTAAA TAAAAAGAACTG CTTTAA CAGTTCTTTTTA TTTACAATCGCATCA TERM 1246 984642 - 984625 - T 85 -6.3 -5.28942 | opp_overlap 984619 984625, overlap 984604 984619 TATTGTAAATAAAAA GAACTGC TTTA ACAGTTC TTTTTATTTACAATC TERM 1247 984625 - 984642 + T 82 -5.6 -5.28942 | opp_overlap 984604 984625 984619, overlap 984619 TATTGTAAATAAAAA GAACTG CTTTAA CAGTTC TTTTTATTTACAATC rnh 985433 - 984633 - | ribonuclease HII TERM 1248 985370 - 985382 + g 79 -3.4 -5.39681 | overlap 985369 CATCATGAGGGTCTG CTAG ACTGG CTAG TTTTTCTTTAATTGT LCK_00943 986262 - 985423 - | GTPase TERM 1249 985563 - 985542 - G 80 -6 -4.71776 | TAATAGCTAATAAAA TTTGAACA TTGTCT TGTTCAAA AGCATTTTCTTCTAA LCK_00944 986535 - 986308 - | hypothetical protein LCK_00945 987133 - 986522 - | hypothetical protein TERM 1250 986733 - 986745 + g 79 -3.3 -5.52909 | opp_overlap 986733 ATAGGTAATGGTAAA TTGCC AAT GGCCA TTTTTTTAGCTGTTA LCK_00946 988038 - 987115 - | putative extracellular lysophospholipase TERM 1251 988112 - 988085 - R 76 -4.2 -5.15634 | TATTGTACCAAAAAA GAACTATTGCGT CTTC AAACAATAGCTC TTACTAAGATAGATA LCK_00947 989386 - 988133 - | di- or tripeptidase LCK_00948 990290 - 989463 - | NIF3 family protein TERM 1252 990151 - 990163 + gr 73 -7.7 -3.89501 | CGCGAAATTGATTGA TTGGG ATC CCCAA TTTGTAACCCTGTTG LCK_00949 990937 - 990248 - | SAM-dependent methyltransferase LCK_00950 992101 - 991004 - | L-alanine-DL-glutamate epimerase LCK_00951 992900 - 992094 - | alpha/beta superfamily hydrolase/acyltransferase TERM 1253 992832 - 992844 + g 81 -2.7 -5.55664 | overlap 992823 CAGTAACCAGCGTTT TGGTA CAT TACTA TTTTTTTGGTAGTGG menD 994518 - 992893 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 1254 993174 - 993192 + g 76 -4.7 -5.03715 | opp_overlap 993174 TGTTAATCACAATAA TATCAAT ATTCA ATTGATA TTTTTTCGCCATCAT LCK_00953 995698 - 994508 - | isochorismate synthase TERM 1255 995753 - 995730 - R 83 -7.4 -4.82667 | opp_overlap 995723 TCATCATATTAAAAA GCAACAGGCA ATCG TACCCGTCGC TTTTTTAATTTTATC LCK_00954 996267 - 995767 - | hypothetical protein LCK_00955 997073 - 996267 - | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase LCK_00956 997591 - 997094 - | hypothetical protein TERM 1256 997800 - 997817 + G 70 -7.7 -3.62291 | overlap 997798 CATTAATATCCCTAA CCGTCTT GCAG AAGGCGG TATTTCTGGTATTAC LCK_00957 997696 - 998580 + | YitT family protein LCK_00958 999194 - 998625 - | histone acetyltransferase HPA2 tex 1001392 - 999191 - | transcriptional accessory protein LCK_00960 1002399 - 1001539 - | transcriptional antiterminator bglG:CAT RNA-binding region TERM 1257 1001682 - 1001669 - G 71 -6.7 -4.13767 | opp_overlap 1001669 1001668, overlap 1001654 TCTTTTATTGTAAAA GCAAC TTCC GTTGC CTTTGGATAAGCAGT LCK_00961 1003595 - 1002411 - | glycoside hydrolase family protein LCK_00962 1003865 - 1003644 - | glycoside hydrolase family protein LCK_00963 1005739 - 1003865 - | sugar-specific permease EIIA TERM 1258 1005284 - 1005272 - G 70 -7.7 -3.75505 | CGGTAAAAAGTACAA TGGTG CGT CACCA ACAAAATAAAGAATT TERM 1259 1005848 - 1005794 - R 100 -11 -5.29846 | opp_overlap 1005814 1005843, overlap 1005843 AAGGTCAAATAAAAA GCCGAATCCATAAAACAACTTAGTAA TCA CTACTTAGTCATTTCATCAATTCGGC CATGCCTGAATTTCT TERM 1260 1006010 - 1005983 - R 100 -15 -5.71712 | TTTGACATAAAAAAA CGCCGTTAACTC GTAA AAGTTAACGGCG GGTAGGTAGATAGAT folP 1007156 - 1006080 - | dihydropteroate synthase xtp 1007745 - 1007146 - | xanthosine triphosphate pyrophosphatase TERM 1261 1007535 - 1007519 - G 71 -6.5 -4.2018 | opp_overlap 1007530 AAAGCCTTAAAATAA GCAGCTG TAT CATCTGC TAAAATGGCAGAATC TERM 1262 1007713 - 1007674 - G 77 -8.8 -3.93038 | gap 1, opp_overlap 1007674 1007674 CACTTGAATACCAAA TTCAGCAAAAACACGCTGA ATT TCT-CTTGTTTTTGCTGAA TTATTTGACGCAACA TERM 1263 1007674 - 1007713 + g 77 -8.8 -3.90744 | gap 1, opp_overlap 1007674, overlap 1007674 CACTTGAATACCAAA TTCAGCAAAAACACGCTGA ATT TCT-CTTGTTTTTGCTGAA TTATTTGACGCAACA folC2 1009009 - 1007738 - | folylpolyglutamate synthase folE 1009587 - 1009012 - | GTP cyclohydrolase folK 1010074 - 1009574 - | hydroxymethylpterin pyrophosphokinase folB 1010457 - 1010071 - | dihydroneopterin aldolase TERM 1264 1010561 - 1010532 - R 87 -12.5 -3.07291 | opp_overlap 1010540, overlap 1010522 1010540 AATGATTTTATGCAA TAAAAAAACTATC TCTA GATAGTTTTTTTA ACAAATCGGCGCTTT TERM 1265 1010553 - 1010540 - R 91 -5.3 -5.8187 | opp_overlap 1010540, overlap 1010532 TATGCAATAAAAAAA CTATC TCTA GATAG TTTTTTTAACAAATC TERM 1266 1010540 - 1010553 + r 84 -5.3 -5.41143 | opp_overlap 1010532 1010540 TATGCAATAAAAAAA CTATC TCTA GATAG TTTTTTTAACAAATC LCK_00970 1011265 - 1010546 - | nicotinamide mononucleotide transporter TERM 1267 1011386 - 1011344 - R 100 -13.7 -5.00616 | opp_overlap 1011344 TGTCTTGTTAAAAAA GTCATTTGGTATAACTTGC CAGTC GTAAGTTATGCCAAATGAC TTTTTTGTACTGCCA TERM 1268 1011344 - 1011386 + r 100 -18.1 -5.31275 | opp_overlap 1011344 TGTCTTGTTAAAAAA GTCATTTGGTATAACTTGC CAGTC GTAAGTTATGCCAAATGAC TTTTTTGTACTGCCA LCK_00971 1012329 - 1011451 - | galactose mutarotase TERM 1269 1012210 - 1012190 - G 76 -7.5 -4.1711 | opp_overlap 1012190 ACGATTGGGAATAAA TTGGAGGCG TGA CGACCCCAA TACTTCGGATCCCCG LCK_00972 1013304 - 1012390 - | site-specific recombinase XerD TERM 1270 1013502 - 1013478 - g 77 -10.1 -3.32268 | overlap 1013481 CAATCACCCTTACAA CACGTTGCAAA TCA TTTGCAACACG CACAACATACTATTC TERM 1271 1013499 - 1013481 - g 72 -10.4 -2.53271 | overlap 1013478 TCACCCTTACAACAC GTTGCAAA TCA TTTGCAAC ACGCACAACATACTA LCK_00973 1013448 - 1013891 + | hypothetical protein TERM 1272 1013935 - 1013881 - T 100 -14.1 -3.65991 | opp_overlap 1013897, overlap 1013897 ATTCTTCTAAGACAA TCAATCACTAAAAAAAGCAATCTTA AGTTA TAAGATTGCTTTTTTTAGTTTTTAA ATGAATGAATTGGTG TERM 1273 1013919 - 1013897 - T 100 -9.3 -5.58074 | opp_overlap 1013897, overlap 1013881 CAATCACTAAAAAAA GCAATCTTA AGTTA TAAGATTGC TTTTTTTAGTTTTTA TERM 1274 1013897 - 1013919 + T 100 -9.3 -5.85011 | opp_overlap 1013881 1013897 CAATCACTAAAAAAA GCAATCTTA AGTTA TAAGATTGC TTTTTTTAGTTTTTA LCK_00974 1015268 - 1013925 - | hypothetical protein TERM 1275 1014289 - 1014260 - G 77 -10.1 -3.27923 | CCTCAACAGCATCAA TCATACCTGCGTC TTCT GAAACAGGTATGA AAGCACCCGATAAAC TERM 1276 1014984 - 1014947 - G 77 -8.5 -3.83868 | gap 1, overlap 1014943 CACCAATAAAATCAA CACCCACAGCCTTAGCTG CAT CATCTAAAGC-ATGGGCG TAATATAGCATGTCA TERM 1277 1015331 - 1015297 - R 72 -8.1 -3.4252 | opp_overlap 1015299, overlap 1015299 TTTCATGCACGAGAA TATGACAGTATAATA TCACC TACTATACTGTCATT TAACCACATTATAAT TERM 1278 1015299 - 1015329 + r 77 -8.5 -3.56099 | opp_overlap 1015299 1015297 TCATGCACGAGAATA TGACAGTATAATA TCACC TACTATACTGTCA TTTAACCACATTATA TERM 1279 1015329 - 1015299 - R 86 -10.7 -3.28447 | opp_overlap 1015299, overlap 1015297 TCATGCACGAGAATA TGACAGTATAATA TCACC TACTATACTGTCA TTTAACCACATTATA LCK_00975 1015631 - 1015359 - | ACT domain-containing protein mvaS 1016868 - 1015708 - | 3-hydroxy-3-methylglutaryl CoA synthase TERM 1280 1016444 - 1016393 - G 75 -10.3 -2.99449 | gap 1, opp_overlap 1016405 TGTGACACAATCATA GCTATGGCACCACCAC-CCTGG GTGACTTCT CCAGGTGTCGCAATGCCATAGC GCGCTATATCGGATG TERM 1281 1016924 - 1016911 - R 83 -5.9 -5.17054 | opp_overlap 1016911 ATAACATGCAAAAAA GCGCC ATTA GACGC TTTAAATGAGATACT LCK_00977 1018548 - 1016944 - | ABC transporter ATPase TERM 1282 1017294 - 1017314 + g 70 -8.3 -3.44267 | opp_overlap 1017297, overlap 1017297 GGAATAACATTTGAC CAAGCATAC CCC GTAAGCTTG TATTATCCTTTTGTT TERM 1283 1017764 - 1017754 - G 73 -5.4 -4.4891 | opp_overlap 1017754 1017740 TGCATTAGCAGAAAA TCGT GCT ACGA ATTCCTGCAGTTGCT TERM 1284 1018677 - 1018662 - R 95 -9 -5.16133 | opp_overlap 1018662 ACTATAACAGAAAAA GCACGA AAGG TCGTGC TTTTCAAAAGAATTT TERM 1285 1018662 - 1018677 + r 85 -9 -4.0896 | opp_overlap 1018662 ACTATAACAGAAAAA GCACGA AAGG TCGTGC TTTTCAAAAGAATTT LCK_00978 1019155 - 1018715 - | DMT family permease LCK_00979 1019969 - 1019232 - | hypothetical protein TERM 1286 1019667 - 1019657 - G 70 -5.4 -4.41633 | TATTCGTAAAAATAA TGTG GTG CACA CCCAGCTCTGTCGCT prmA 1020847 - 1019969 - | ribosomal protein L11 methyltransferase LCK_00981 1021917 - 1020844 - | NADPH:quinone reductase lepA 1023859 - 1022006 - | GTP-binding protein LepA TERM 1287 1022100 - 1022113 + g 77 -5.2 -4.96646 | CCTACTGATTTCATA CGCG CTTTTC CGCG TTTTTGCTTGTCTAA TERM 1288 1023950 - 1023935 - R 74 -3.2 -5.25803 | opp_overlap 1023929 1023935 1023937, overlap 1023937 AATGGCCATAAAAAA GGTTGC TGGC GCAAGC TTTTTGTCATTTAAC TERM 1289 1023935 - 1023950 + r 71 -3.2 -5.04325 | opp_overlap 1023935 1023937, overlap 1023929 1023937 AATGGCCATAAAAAA GGTTGC TGGC GCAAGC TTTTTGTCATTTAAC LCK_00983 1024848 - 1023961 - | transport protein TERM 1290 1024070 - 1024056 - G 71 -5 -4.50988 | overlap 1024062 CGATATGAAAAACAA CAACAC TGA GTATTG TACCCATCAATGGTT TERM 1291 1024196 - 1024186 - G 93 -5.4 -5.55698 | GACAATCGAAAAAAA TAGC AAA GCTA CGGTATCTAATGTCC TERM 1292 1024457 - 1024440 - G 79 -9.9 -3.62224 | opp_overlap 1024438 ATACTGTCCCAACAA TGGCCAT TATA ATGGCCA AAATATCTTGTCGTG TERM 1293 1024910 - 1024887 - R 80 -6.8 -4.65895 | opp_overlap 1024887 1024900, overlap 1024900 TTTGTTATTTAAAAA TAAGCCTAGC AGAT GCTAAACTTA TTTTGCATGGTTATT LCK_00984 1025973 - 1024924 - | dehydrogenase sygB 1028077 - 1026017 - | glycyl-tRNA synthetase, beta subunit TERM 1294 1027244 - 1027229 - G 71 -4 -4.87665 | gap 1 TCTGACGTAGAAAAA GCGCTGA TGC TCA-CGC ATAGATGTAATCAAC sygA 1029025 - 1028081 - | glycyl-tRNA synthetase, alpha subunit TERM 1295 1029144 - 1029096 - R 82 -4.6 -5.5112 | gap 1 TTTAGCAACAAAAAA CGCCTGAACTGTACCAATGCCAA AATA CTGACATCAGGAC-GCTCACGCG CGGTTCCACCTGATT frr 1029925 - 1029380 - | ribosome recycling factor pyrH 1030650 - 1029925 - | putative uridylate kinase TERM 1296 1030704 - 1030727 + r 71 -5.3 -4.58283 | opp_overlap 1030704 TATTCCGCAAAAAAA GTGCGTCAT CATAAA ATAACGCAC TTTTTAACAAAATTA TERM 1297 1030727 - 1030704 - R 93 -8.2 -5.41143 | opp_overlap 1030704 TATTCCGCAAAAAAA GTGCGTCATC ATAA AATAACGCAC TTTTTAACAAAATTA tsf 1031615 - 1030740 - | translation elongation factor Ts rpsB 1032560 - 1031739 - | ribosomal protein S2 TERM 1298 1032095 - 1032116 + g 79 -6.7 -4.64763 | gap 1 TGTTCAACTTTTCGC GTTG-CTTGT TCA ACAAGACAAC TTCTTTTTTAGGTAA LCK_00991 1032948 - 1032661 - | endonuclease LCK_00992 1033700 - 1032939 - | O-methyltransferase plsC 1033759 - 1034394 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1299 1034392 - 1034407 + T 100 -7.6 -5.96219 | opp_overlap 1034392 AAACGTGAAAAAAAA TAAGCC AAAT GGCTTA TTTTTTTTGTGACTG TERM 1300 1034407 - 1034392 - T 100 -7.6 -5.82388 | opp_overlap 1034392 AAACGTGAAAAAAAA TAAGCC AAAT GGCTTA TTTTTTTTGTGACTG LCK_00994 1034638 - 1034405 - | hypothetical protein lexA 1034845 - 1035480 + | LexA repressor TERM 1301 1035522 - 1035495 - T 100 -18.6 -5.82036 | opp_overlap 1035495 ATAACAAATAAAAAA GCTGACATGGCT TTAA AGCCATGTCAGC TTTTTTATTATGCCC TERM 1302 1035495 - 1035522 + T 100 -18.6 -5.55769 | opp_overlap 1035495 ATAACAAATAAAAAA GCTGACATGGCT TTAA AGCCATGTCAGC TTTTTTATTATGCCC pyrE 1036159 - 1035530 - | orotate phosphoribosyltransferase TERM 1303 1035742 - 1035715 - G 77 -9.9 -3.60587 | opp_overlap 1035714 AGAAAATCGACACAA CGCCAAGAACG TTGGCG CCTTCTTGGCG AACAGCTTTAACTGC pyrF 1036862 - 1036164 - | orotidine-5'-phosphate decarboxylase TERM 1304 1036253 - 1036271 + g 74 -4.4 -4.9934 | opp_overlap 1036252, overlap 1036254 CCACAACTAAGCCAG TCGCGCCA TGG TGACGCGC TTTTTGTGGTGTTGT pyrDB 1037823 - 1036903 - | dihydroorotate dehydrogenase B, catalytic subunit LCK_00999 1041055 - 1037876 - | carbamoylphosphate synthase large subunit (split gene in MJ) pyrAA1 1042136 - 1041048 - | carbamoylphosphate synthase small subunit TERM 1305 1041632 - 1041645 + g 80 -8.1 -4.44284 | opp_overlap 1041626 1041630 TTAAGGCAATGGATA CCCCA TCAG TGGGG TTTTGATATTGCGTT pyrC 1043436 - 1042168 - | dihydroorotase TERM 1306 1043205 - 1043231 + g 83 -7.2 -4.68511 | opp_overlap 1043194, overlap 1043208 1043209 TAAAGCCACCACGAG CGGCTGCCGCTG AGC CAGTGGCAATTG TTTCTTTGTATTCAA TERM 1307 1043208 - 1043228 + g 78 -7.5 -4.42514 | overlap 1043205 1043209 AGCCACCACGAGCGG CTGCCGCTG AGC CAGTGGCAA TTGTTTCTTTGTATT TERM 1308 1043209 - 1043227 + g 79 -11 -3.23068 | overlap 1043208 1043205 GCCACCACGAGCGGC TGCCGCTG AGC CAGTGGCA ATTGTTTCTTTGTAT pyrB 1044334 - 1043423 - | aspartate carbamoyltransferase TERM 1309 1044358 - 1044382 + r 83 -10 -3.87869 | opp_overlap 1044358 TTTTTATACAAAAAA CGCGTAAGCC ATTTC GACTTACGCG TTTCTAGAAAATTAC TERM 1310 1044382 - 1044358 - R 100 -12.9 -5.36441 | opp_overlap 1044358 TTTTTATACAAAAAA CGCGTAAGCCA TTT CGACTTACGCG TTTCTAGAAAATTAC sip3 1045150 - 1044512 - | Signal peptidase I LCK_01004 1045544 - 1045188 - | hypothetical protein pbp2A 1047656 - 1045587 - | membrane carboxypeptidase (penicillin-binding protein) TERM 1311 1046515 - 1046495 - G 71 -7.6 -3.85817 | ACGCCGGTGCATAAA CGGCAATC GGTTT AATTGCCG AGCCAGGTTGCAGCT TERM 1312 1046855 - 1046873 + g 70 -8.1 -3.75153 | TGTCATTTAGGTTCA TCGGCGC CGCTT GCGCTGA TTTGAGTTGCGCCGA LCK_01006 1048130 - 1047660 - | arginine repressor argS 1049880 - 1048189 - | arginyl-tRNA synthetase TERM 1313 1049492 - 1049505 + g 73 -6.7 -4.1964 | opp_overlap 1049489, overlap 1049489 GTTGATCGTAAATGT CCCAT AGAC ATGGG TTTTGCAATATTAGG TERM 1314 1049657 - 1049667 + g 73 -5.4 -4.62872 | TTCACATAAGGTCCT GTTG CCA CAAC TTTTTCGAAGTTACT TERM 1315 1049771 - 1049796 + g 76 -9.1 -3.70546 | opp_overlap 1049766 1049770 1049769, overlap 1049771 GTTGGAAAAGCAACG TCACCCAAATC GGAT GATTTTGGTGA TTCTAATTTTGCTGC TERM 1316 1049975 - 1049945 - R 100 -14.2 -4.99035 | overlap 1049973 TGATTCATATAAAAA TCGTCCCTCGTTAA CAA TTAACAAGAGACGA GATAAACCCGCGGTA LCK_01008 1050397 - 1050110 - | hypothetical protein coaBC 1051694 - 1050504 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 1317 1051820 - 1051792 - R 100 -10.4 -5.52384 | opp_overlap 1051792 TGCCTATCAAAAAAA TCGTTAAGGGAC GAATA GTCACTTAACGA TGTGATGATATTTAA TERM 1318 1051792 - 1051820 + r 79 -10.4 -2.8789 | opp_overlap 1051792 TGCCTATCAAAAAAA TCGTTAAGGGAC GAATA GTCACTTAACGA TGTGATGATATTTAA LCK_01010 1052828 - 1052010 - | membrane protease subunit stomatin/prohibitin-like protein LCK_01011 1053211 - 1052861 - | HicB domain-containing protein TERM 1319 1053104 - 1053081 - G 71 -9.8 -2.76696 | opp_overlap 1053079, overlap 1053080 CCCTCCTCTAACAAT TTCGTTAAAT AATT ATTTAACGAA CGTCCTTCCTGACTC TERM 1320 1053318 - 1053289 - R 85 -4.3 -5.65927 | CATCCAAATAAAAAA GCAACAGAACG TGACGAGG CTTCCTGTTGC GCTTCGATTTTTAAT LCK_01012 1055811 - 1053343 - | cation transporter E1-E2 family ATPase TERM 1321 1053983 - 1053973 - G 71 -6.8 -4.0342 | opp_overlap 1053972 TTTAACCAAGAACAA GCTC GCC GAGC GTTCAATATTGTTAA murE 1057399 - 1055849 - | UDP-N-acetylmuramyl tripeptide synthase TERM 1322 1057398 - 1057372 - G 100 -8.8 -5.74122 | opp_overlap 1057372 1057395 TATTATACAAAAAAA TGACAGTTGTGT CAG ACAGAACCGTCA TTTAGATGACTTCAA LCK_01014 1058544 - 1057396 - | Kef-type K+ transport system, membrane component LCK_01015 1059794 - 1058658 - | tRNA-dihydrouridine synthase folC3 1061216 - 1059900 - | folylpolyglutamate synthase TERM 1323 1060734 - 1060704 - G 89 -12 -3.74872 | opp_overlap 1060707, overlap 1060707 ACTGATTTTAGTAAA TACTGCCATCAATG GCG CATCGATGGCATTA GTCGCATCACGTAAG TERM 1324 1060707 - 1060731 + g 82 -11.5 -3.16683 | opp_overlap 1060704 1060707 GATTTTAGTAAATAC TGCCATCAATG GCG CATCGATGGCA TTAGTCGCATCACGT TERM 1325 1060731 - 1060707 - G 91 -13.7 -2.67171 | opp_overlap 1060707, overlap 1060704 GATTTTAGTAAATAC TGCCATCAATG GCG CATCGATGGCA TTAGTCGCATCACGT TERM 1326 1061323 - 1061309 - R 86 -5.7 -5.71983 | TTAACCACAAAAAAA CGGTT GTTTA AACCG TTACGCCTGCGGGGA LCK_01017 1062047 - 1061316 - | glycerophosphoryl diester phosphodiesterase TERM 1327 1062025 - 1062035 + g 70 -2.6 -5.06585 | CCACGATGTGCAATT TTTA TCA TAAA TTTTTCTCTCATTTC LCK_01018 1063393 - 1062044 - | ABC-type sugar transport system, periplasmic component LCK_01019 1064214 - 1063396 - | ABC-type sugar transport system, permease component TERM 1328 1063448 - 1063432 - G 73 -8.7 -3.75229 | overlap 1063433 CAAACCAGATTTAAA CGCTCTC TGC GAGAGCA GTAAAACTACGAGAC TERM 1329 1063447 - 1063433 - G 73 -10 -2.84414 | overlap 1063432 AAACCAGATTTAAAC GCTCTC TGC GAGAGC AGTAAAACTACGAGA LCK_01020 1065140 - 1064211 - | sugar ABC transporter, permease protein LCK_01021 1066197 - 1065142 - | sugar ABC transporter TERM 1330 1066338 - 1066307 - R 90 -11.8 -3.40071 | opp_overlap 1066307 1066312, overlap 1066312 AATTTATAGGCATAA GAAAAGCCAAGATA ATAT TATCTTGGCTTTTG TTTCAGTAACCCTTA TERM 1331 1066307 - 1066338 + r 91 -11.8 -3.65827 | opp_overlap 1066307 1066312, overlap 1066312 AATTTATAGGCATAA GAAAAGCCAAGATA ATAT TATCTTGGCTTTTG TTTCAGTAACCCTTA TERM 1332 1066333 - 1066312 - R 100 -11.7 -4.79955 | opp_overlap 1066307 1066312, overlap 1066307 ATAGGCATAAGAAAA GCCAAGATA ATAT TATCTTGGC TTTTGTTTCAGTAAC TERM 1333 1066312 - 1066333 + r 100 -11.7 -4.90778 | opp_overlap 1066312 1066307, overlap 1066307 ATAGGCATAAGAAAA GCCAAGATA ATAT TATCTTGGC TTTTGTTTCAGTAAC serA 1067282 - 1066341 - | phosphoglycerate dehydrogenase TERM 1334 1066385 - 1066402 + g 72 -8.5 -3.45634 | overlap 1066390 TTTGCTTAAACGAGC CATCGTT AACA AACGATG TTAAATTTTGTTCAA TERM 1335 1066697 - 1066681 - G 79 -3.5 -5.42259 | overlap 1066682 CGAGTGTCAAAAAAA TCGGCTG TAT CTGCCGT ACCTGGCAAACCATC TERM 1336 1067583 - 1067603 + H 100 -11.2 -6.20267 | opp_overlap 1067583 CATCATTTTTAAAAA GCGCTAGT ATGCA ACTAGCGC TTTTTTTCTTTTTCG TERM 1337 1067603 - 1067583 - H 100 -11.2 -4.60487 | opp_overlap 1067583 CATCATTTTTAAAAA GCGCTAGT ATGCA ACTAGCGC TTTTTTTCTTTTTCG TERM 1338 1068589 - 1068603 + G 70 -8.6 -3.38207 | overlap 1068579 TAATTGCTGGTGTTT CAGCTA TGC TAGCTG TTGGTGTGTTCAATC TERM 1339 1068804 - 1068792 - g 70 -2.7 -5.07652 | overlap 1068787 GCCGGTAAAACAAAA GCAAA CGA TTTAC ATTTGGACGTTGTTT LCK_01023 1067691 - 1068821 + | integral membrane protein ilvE 1068879 - 1069919 + | branched-chain amino acid aminotransferase TERM 1340 1069928 - 1069955 + T 100 -15.6 -4.88407 | opp_overlap 1069928 TAATTAATATAAAAA GCAGGTGCCCAC TATT GTGGCCACCTGC TTTTTACTTGACTGA TERM 1341 1069955 - 1069928 - T 100 -15.6 -5.1485 | opp_overlap 1069928 TAATTAATATAAAAA GCAGGTGCCCAC TATT GTGGCCACCTGC TTTTTACTTGACTGA TERM 1342 1070107 - 1070126 + T 100 -10 -5.1244 | opp_overlap 1070107 CACGAGCTATATCAA GTCGCAAC TTCG GTTGCGGC TTTTTATATTAATAA LCK_01025 1070702 - 1070166 - | transcriptional regulator LCK_01026 1072069 - 1070717 - | putative nucleotide phosphoesterase LCK_01027 1072715 - 1072098 - | phosphohydrolase TERM 1343 1072767 - 1072784 + r 75 -6.9 -4.15788 | opp_overlap 1072767 GACGATAACAAAAAA GTGCCGC AGCT GCGACAC TTTATTCGCGAAATT TERM 1344 1072784 - 1072767 - R 100 -9.1 -5.58179 | opp_overlap 1072767 GACGATAACAAAAAA GTGCCGC AGCT GCGACAC TTTATTCGCGAAATT LCK_01028 1073232 - 1072786 - | hypothetical protein TERM 1345 1073095 - 1073083 - G 77 -7.7 -4.18644 | opp_overlap 1073082 1073083 ATTATAGAAATCAAA CCTTG GAT CAAGG ATGTCTTTTGCTTCT LCK_01029 1074328 - 1073234 - | Xaa-Pro aminopeptidase TERM 1346 1074421 - 1074444 + r 83 -7.5 -4.79667 | opp_overlap 1074421 TTTGGCATAAAAAAA GCGTAATCA ATTAAA TGATTGCGC TTTTTGATGACTTTT TERM 1347 1074444 - 1074421 - R 86 -5.3 -5.60993 | opp_overlap 1074421 TTTGGCATAAAAAAA GCGTAATCA ATTAAA TGATTGCGC TTTTTGATGACTTTT rpmA 1074779 - 1074462 - | ribosomal protein L27 rplU 1075107 - 1074808 - | ribosomal protein L21 TERM 1348 1074892 - 1074907 + g 74 -6.2 -4.45664 | CTTAGCCTTGTACTT GAAAGT AACA ACTTTC TTTTGCTTACCTTGC LCK_01032 1075838 - 1075263 - | transcriptional regulator TERM 1349 1075863 - 1075881 + r 76 -7.4 -3.93237 | opp_overlap 1075865, overlap 1075865 TTTCTAAAAGCAAAA AAGCACAG TGA CTGTGCTA TTCTTCATTCTTTGC TERM 1350 1075879 - 1075865 - R 100 -10 -5.46698 | opp_overlap 1075863 1075865 TCTAAAAGCAAAAAA GCACAG TGA CTGTGC TATTCTTCATTCTTT TERM 1351 1075865 - 1075879 + r 82 -10 -3.53745 | opp_overlap 1075865, overlap 1075863 TCTAAAAGCAAAAAA GCACAG TGA CTGTGC TATTCTTCATTCTTT LCK_01033 1076397 - 1075879 - | chaperonin GroEL TERM 1352 1076590 - 1076618 + r 100 -10.4 -5.5604 | CTCAACGCATATTGA CCGTTTTATCAG GATTA CTGATAGAGCGG TTTTTTGTTGCTTAA LCK_01034 1076975 - 1076724 - | hypothetical protein TERM 1353 1077052 - 1077031 - R 93 -3.7 -6.01187 | AAGCAAATAAAAAAA CATCCACAC AAAA ATGCAGATG CGTAAACTAAACTAG TERM 1354 1077221 - 1077204 - R 93 -5.6 -5.96894 | ATTCAAATAAAAAAA TCCACA AACTAA TGTGGA CTAACCTAGTAGTTA TERM 1355 1077327 - 1077363 + r 100 -16.1 -3.15757 | opp_overlap 1077332, overlap 1077332 TGGCTTATGCAAATA AAAAACACCCAACCAGA TTA TTTGGTTGGGTGTTTTA GTTTATTCAATTATA TERM 1356 1077358 - 1077332 - R 100 -13.8 -5.65927 | opp_overlap 1077327 1077332 TATGCAAATAAAAAA CACCCAACCAGA TTA TTTGGTTGGGTG TTTTAGTTTATTCAA TERM 1357 1077332 - 1077358 + r 100 -16 -4.67942 | opp_overlap 1077332, overlap 1077327 TATGCAAATAAAAAA CACCCAACCAGA TTA TTTGGTTGGGTG TTTTAGTTTATTCAA lytA 1078333 - 1077374 - | N-acetylmuramoyl-L-alanine amidase LCK_01036 1078766 - 1078344 - | hypothetical protein LCK_01037 1079094 - 1078870 - | hypothetical protein LCK_01038 1079238 - 1079098 - | hypothetical protein LCK_01039 1079423 - 1079238 - | hypothetical protein TERM 1358 1079523 - 1079502 - R 76 -6.6 -4.54727 | opp_overlap 1079502 TTCTGCAAATTAAAA GGCTAACC GCTAGT GATTAGCC CTGTTACTTATTTAA LCK_01040 1079740 - 1079531 - | hypothetical protein LCK_01041 1080396 - 1079737 - | hypothetical protein LCK_01042 1081235 - 1080465 - | transposase LCK_01043 1081567 - 1081292 - | transposase TERM 1359 1081322 - 1081340 + g 72 -4.6 -4.79174 | GCCCAGCAAAACGGC CGCAATTT TTA AAATTTCG TTTTCTTCCTTGAGT TERM 1360 1081420 - 1081435 + g 70 -3.2 -5.00616 | overlap 1081421 TGCCATTCATGTCAG TCCCAA CGAT TTGGGC TTTTTTGACCCAACC LCK_01044 1087004 - 1081590 - | autotransporter adhesin TERM 1361 1083156 - 1083166 + g 73 -6.8 -4.22338 | GCTTACCTTTGTACT CAGG TCA CCTG TTTTAGCATTATAAT TERM 1362 1084094 - 1084114 + g 79 -9.8 -3.64599 | opp_overlap 1084093 1084090 TATTTTTCAAACCAT CTACTGCA GTTTG TGCAGTAG TTTGAGCTGTACTGA TERM 1363 1087057 - 1087044 - R 76 -4.5 -5.1675 | opp_overlap 1087044 1087037 CTATGTACGAAAAAA GCACC TTTA AGTGC TTATTTCATTGCTGG LCK_01045 1089415 - 1087058 - | minor structural protein gp75 TERM 1364 1088912 - 1088892 - G 70 -5.4 -4.45664 | GGAATCGAAGTAAAA TGACCGTA AAAAG TGCGGTCA GGAAATGCGCCAAAA TERM 1365 1089471 - 1089454 - R 79 -4.1 -5.28176 | TCTATGTACAAAAAA GACACTA ATTA CAGTGCC TAATTTTTATCCTTT LCK_01046 1095291 - 1089478 - | Phage-related tail protein TERM 1366 1091177 - 1091202 + g 73 -5.5 -4.62441 | gap 1 TCAGGACTATCGTTT CCATCATTAAGC ATA GCT-AATGTTGG TTTATTTATCTCACG TERM 1367 1091495 - 1091514 + g 76 -3.5 -5.23943 | AAAGTGCTGCTTTGA GTCTCTG CTAAAC CAGTGAC TTTATTTTTTTGATC TERM 1368 1091838 - 1091857 + g 83 -5 -5.19916 | overlap 1091841 TTTTATAAGCCTGTC CAACTACG GTAT CGTAGTTC TTTTTTGCATCTTTT TERM 1369 1091841 - 1091854 + g 79 -6.7 -4.65666 | overlap 1091838 TATAAGCCTGTCCAA CTACG GTAT CGTAG TTCTTTTTTGCATCT LCK_01047 1095480 - 1095292 - | hypothetical protein LCK_01048 1095929 - 1095501 - | molecular chaperone TERM 1370 1095650 - 1095664 + g 70 -8.6 -3.36195 | overlap 1095649 AGGCTTCTTTGAACT GTGTTG CAT CAACAC TATCTTTAATCTTTA LCK_01049 1096680 - 1096030 - | putative major tail protein LCK_01050 1097058 - 1096684 - | glutamyl- or glutaminyl-tRNA synthetase LCK_01051 1097471 - 1097055 - | putative head-tail joining protein LCK_01052 1097832 - 1097461 - | hypothetical protein TERM 1371 1097755 - 1097769 + g 70 -5.8 -4.34402 | TTTCAATCCAGTATT TCTATT CTG AATAGA TTTTACTGTACCAAA LCK_01053 1098151 - 1097825 - | putative DNA packaging protein-like protein LCK_01054 1099325 - 1098162 - | major head protein-like protein LCK_01055 1100025 - 1099336 - | protease subunit of ATP-dependent Clp protease LCK_01056 1101173 - 1100022 - | hypothetical protein TERM 1372 1101291 - 1101272 - R 83 -5 -5.49568 | AAGTTAAAATAAAAA GCTCCAAC GTCA ATTAGAGC GATTCCTAGAATAAA LCK_01057 1103246 - 1101366 - | Phage terminase-like protein, large subunit LCK_01058 1103757 - 1103233 - | Phage terminase, small subunit TERM 1373 1103927 - 1103943 + r 79 -3.6 -5.4251 | opp_overlap 1103929, overlap 1103929 ACGCTCCCCTCCAAC AACCCC ACCCC GGGGTA TTTTTTATATATACA TERM 1374 1103929 - 1103941 + r 72 -6.2 -4.34353 | opp_overlap 1103929, overlap 1103927 GCTCCCCTCCAACAA CCCC ACCCC GGGG TATTTTTTATATATA LCK_01059 1104884 - 1104114 - | transposase LCK_01060 1105216 - 1104941 - | transposase TERM 1375 1104971 - 1104989 + g 72 -4.6 -4.79174 | GCCCAGCAAAACGGC CGCAATTT TTA AAATTTCG TTTTCTTCCTTGAGT TERM 1376 1105069 - 1105084 + g 70 -3.2 -5.00616 | overlap 1105070 TGCCATTCATGTCAG TCCCAA CGAT TTGGGC TTTTTTGACCCAACC LCK_01061 1105730 - 1105536 - | hypothetical protein TERM 1377 1105789 - 1105764 - R 88 -7.6 -4.99035 | opp_overlap 1105764 TTATGTATACAAAAA GCCCAACTCA ATTTAA TGAGCTGAGC TTACATCACTTGAAC TERM 1378 1106092 - 1106081 - R 93 -7.2 -5.46706 | ACTGCAAAATAAAAA GCGC TTAT GCGC TTAAAATTAAGAATA LCK_01062 1106586 - 1106134 - | hypothetical protein LCK_01063 1106836 - 1106645 - | hypothetical protein TERM 1379 1106880 - 1106856 - R 100 -9.3 -5.15634 | opp_overlap 1106856 TACTCCATCAAAAAA GCCCAACCTAC ACT GTAAGTCGGAC TTCTATGTTATTATG TERM 1380 1107040 - 1107015 - R 88 -7.6 -4.92783 | opp_overlap 1107015 AACTCATGATAAAAA CCACTATAGG AATTAA CCTTTAGTGG TTTTGTGGTGATAAT TERM 1381 1107015 - 1107040 + r 82 -7.6 -4.49311 | opp_overlap 1107015 AACTCATGATAAAAA CCACTATAGG AATTAA CCTTTAGTGG TTTTGTGGTGATAAT LCK_01064 1108083 - 1107673 - | putative transcriptional activator-phage associated TERM 1382 1108122 - 1108144 + r 80 -2.8 -5.75342 | GTGTCACGCTTTTAA TTTGATACAA TAG TTTTATCGAA TTTTTTTTAAAAGGA LCK_01065 1108959 - 1108510 - | dTDP-glucose pyrophosphorylase TERM 1383 1108553 - 1108590 + g 77 -4.9 -4.98672 | gap 1 TATATTTCTAACCTT GGGTTC-ACCTTGTCT ACATAAA AGTCATGGTCGAACCC TTTTATATTTTTCAC TERM 1384 1109012 - 1109040 + r 100 -10.4 -5.27335 | GGCCACGCATATTGA CCGTTTTATCAG AATGA CTGATAGAGCGG TTTTTATTTGCAGGG TERM 1385 1109112 - 1109084 - R 73 -3.9 -5.12617 | TAATCATTCAAAAAA CACACAACTGG AGAACAA CCAATCATGTG TTTTATACGTTTATA LCK_01066 1109422 - 1109165 - | hypothetical protein TERM 1386 1110253 - 1110232 - g 71 -5.2 -4.61566 | gap 1, opp_overlap 1110248 1110249, overlap 1110245 1110248 1110249 TGGCAAACCAGAAAA GGGC-ATTC AAGAA GAATCGCCC CTGGCGGCGCGCTTC LCK_01067 1109620 - 1110297 + | hypothetical protein TERM 1387 1110559 - 1110581 + G 93 -10 -5.00616 | GTATATTAATATTTT TCTGGATAGA TTA TCTATTCAGA TTTTTTAAAGCAGAC LCK_01068 1110390 - 1111127 + | Ion transporter, putative LCK_01069 1111195 - 1111401 + | hypothetical protein TERM 1388 1111432 - 1111402 - T 73 -7 -3.96216 | opp_overlap 1111399 1111408, overlap 1111408 TTTTCAGGGAAATAA GAAAAAGCACCT GAATCCT AGGTGCTTTTTT GTATGCTATGATATG TERM 1389 1111426 - 1111408 - T 84 -6 -5.38549 | opp_overlap 1111408 1111399, overlap 1111402 GGGAAATAAGAAAAA GCACCT GAATCCT AGGTGC TTTTTTGTATGCTAT TERM 1390 1111408 - 1111426 + T 87 -6.7 -5.40625 | opp_overlap 1111402 1111408, overlap 1111399 GGGAAATAAGAAAAA GCACCTG AATCC TAGGTGC TTTTTTGTATGCTAT LCK_01070 1112110 - 1111487 - | peptidase E TERM 1391 1111557 - 1111587 + g 74 -4.1 -5.04987 | gap 1, opp_overlap 1111560, overlap 1111560 TTATTGAGCGTTCTT AAATCGTAACGCTG TCCA TAGCGT-ACGATTG TTTTTTCAACATCTT TERM 1392 1111560 - 1111584 + g 73 -5.8 -4.62085 | gap 1, opp_overlap 1111560, overlap 1111557 TTGAGCGTTCTTAAA TCGTAACGCTG TCCA TAGCGT-ACGA TTGTTTTTTCAACAT LCK_01071 1112908 - 1112372 - | putative integral membrane protein TERM 1393 1113089 - 1113058 - R 100 -14.7 -3.54653 | opp_overlap 1113058 1113063, overlap 1113063 AGTGTCACCAGATAA TAAAAGCACTACC TTTTCG GGTAGTGCTTTTA TTCTGGTAAAACATC TERM 1394 1113058 - 1113089 + r 100 -15.4 -3.4072 | opp_overlap 1113058 1113063, overlap 1113063 AGTGTCACCAGATAA TAAAAGCACTACCT TTTC GGGTAGTGCTTTTA TTCTGGTAAAACATC TERM 1395 1113063 - 1113084 + r 100 -10.9 -4.81212 | opp_overlap 1113058 1113063, overlap 1113058 CACCAGATAATAAAA GCACTACCT TTTC GGGTAGTGC TTTTATTCTGGTAAA TERM 1396 1113084 - 1113063 - R 100 -10.2 -4.85918 | opp_overlap 1113063 1113058, overlap 1113058 CACCAGATAATAAAA GCACTACC TTTTCG GGTAGTGC TTTTATTCTGGTAAA trmB 1113780 - 1113121 - | tRNA (guanine-N(7)-)-methyltransferase TERM 1397 1113792 - 1113812 + r 82 -5.5 -5.24291 | GCATAATATTCCTCC CTGTAAC CCTTTTT GTTACAG TTTTCTTTTCATTTT LCK_01073 1115066 - 1113807 - | ABC transporter permease LCK_01074 1115800 - 1115066 - | ABC-type multidrug transport system, ATPase component TERM 1398 1115729 - 1115741 + g 72 -3.4 -5.055 | GCAACCATCTTCAAT TGTG AATGA CACA TTTTTTAACACTTGA LCK_01075 1115869 - 1116294 + | diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases LCK_01076 1116304 - 1116543 + | hypothetical protein TERM 1399 1116535 - 1116550 + F 80 -6.8 -4.67608 | opp_overlap 1116534 GAATTGTCAAAGTAC CAGGCG TAGT TGCCTG TTTTATGTTAAAATA LCK_01077 1116598 - 1117509 + | parvulin-like peptidyl-prolyl isomerase TERM 1400 1117566 - 1117511 - T 100 -13.8 -4.82091 | opp_overlap 1117511 1117525, overlap 1117525 AAGCAAAGAAATAAA CAATAAATAAAAAAGCTAAGGCTATT AATC AATAGTCCTAGCTTTTTTATTTATCT ATTACATTATAATGA TERM 1401 1117511 - 1117567 + T 79 -10 -3.25072 | gap 1, opp_overlap 1117511 1117525, overlap 1117525 AAGCAAAGAAATAAA CA-ATAAATAAAAAAGCTAAGGCTATT AATC AATAGTCCTAGCTTTTTTATTTATCTA TTACATTATAATGAC TERM 1402 1117552 - 1117525 - T 100 -7.8 -5.82036 | opp_overlap 1117511 1117525, overlap 1117511 ACAATAAATAAAAAA GCTAAGGCTATT AATC AATAGTCCTAGC TTTTTTATTTATCTA TERM 1403 1117525 - 1117552 + T 93 -7.8 -5.76237 | opp_overlap 1117525 1117511, overlap 1117511 ACAATAAATAAAAAA GCTAAGGCTATT AATC AATAGTCCTAGC TTTTTTATTTATCTA LCK_01078 1118516 - 1117557 - | HD-superfamily hydrolase LCK_01079 1120921 - 1118531 - | hypothetical protein TERM 1404 1119941 - 1119931 - G 73 -6.8 -4.28994 | overlap 1119932 GACTATTTAGCAAAA GCGT CAT ACGC TGCATAACAACTTGA LCK_01080 1122089 - 1120923 - | DNA repair exonuclease TERM 1405 1121882 - 1121896 + g 77 -8.6 -3.86524 | ATTGTACTAATTCTT GTAGTC GCG GACTAC TTTCTGAGGCACTAT LCK_01081 1122211 - 1123242 + | 3-carboxymuconate cyclase TERM 1406 1123276 - 1123251 - T 84 -6.2 -5.31059 | opp_overlap 1123251 ATATTAATTAAAAAA GTAACTGACG ACTAAG CGTTAGTTAC TTTTTTTATTCTCAG TERM 1407 1123251 - 1123276 + T 100 -8.4 -5.88565 | opp_overlap 1123251 ATATTAATTAAAAAA GTAACTGACG ACTAAG CGTTAGTTAC TTTTTTTATTCTCAG LCK_01082 1124291 - 1123269 - | phi ETA orf 55-like protein TERM 1408 1123478 - 1123508 + g 89 -10.5 -4.19371 | TCGCCTGTATCTGCG CCCGGACATAATC ATGCA GATTGTGTCCGAG TTTGTTGCGCGTTTC TERM 1409 1124498 - 1124483 - g 70 -3.2 -4.86001 | ATTATGTCACAAAAA CGCTTA GGTA TCAGCG CAGCCATTCTGGCTT TERM 1410 1124997 - 1124980 - g 81 -7 -4.72272 | TGGTCTGATCAAAAA GCAGGT GCCCCT ACCTGC CACAATATCGTTAGC LCK_01083 1124471 - 1125364 + | permease LCK_01084 1125443 - 1125703 + | hypothetical protein TERM 1411 1125728 - 1125748 + F 100 -8.4 -5.91981 | opp_overlap 1125730 AATCAGGTCTTTGAA CACTAGTT GGTAA AACTAGTG TTTTTTTTGAGTTTT TERM 1412 1126869 - 1126845 - g 71 -6.5 -4.1721 | AGCTACAGTGGAAAA CTTGTCAGATA AAA TATCTAACGAG GAACAAACTAAGAAT TERM 1413 1127054 - 1127044 - g 73 -5.4 -4.51174 | opp_overlap 1127044 TTAGTAGAAGCAAAA GAAC TAG GTTC TGATTTAAACAATCA TERM 1414 1127601 - 1127583 - g 85 -3.8 -5.5604 | CGAAGCAATAAAAAA CGAAATTG TCA CTACTTCG GAAGAATTAGAAGTA LCK_01085 1126789 - 1127868 + | prophage Lp2 protein 6 TERM 1415 1127897 - 1127953 + T 95 -6.4 -5.85244 | gap 2 ATCCTCTAAAATAAG CCAGTTTAAAAAAGTGTGCACTATATTA TAT TAATGTAGT-C-CATTTTTTGAAATTGG TTTTTTATTTTACTT TERM 1416 1128371 - 1128356 - T 100 -7.6 -5.95166 | opp_overlap 1128356 TTTAACGAAAAAAAA CGTTGA TATC TCAACG TTTTTTTCATGAATT TERM 1417 1128356 - 1128371 + T 93 -7.6 -5.54894 | opp_overlap 1128356 TTTAACGAAAAAAAA CGTTGA TATC TCAACG TTTTTTTCATGAATT LCK_01086 1130376 - 1128538 - | membrane GTPase involved in stress response TERM 1418 1130423 - 1130445 + r 70 -7 -3.737 | opp_overlap 1130423 CATCTCATAGTAAAA GCTAGGGT CTGTTGT GCCCTAGC TTTGATGCAACGTTA TERM 1419 1130445 - 1130423 - R 74 -6.3 -4.35116 | opp_overlap 1130423 CATCTCATAGTAAAA GCTAGGG TCTGTTGTG CCCTAGC TTTGATGCAACGTTA suhB 1131229 - 1130441 - | myo-inositol-1(or 4)-monophosphatase LCK_01088 1131498 - 1131226 - | hypothetical protein def 1131554 - 1132141 + | peptide deformylase TERM 1420 1132185 - 1132134 - T 93 -13.4 -3.26298 | opp_overlap 1132149, overlap 1132149 ACGATGTCAAATATA TCGATTAATAAAAAACACATCCTT TTAA AAGGATGTGTTTTTTATCATGCAA ACAACTTATAACTTG TERM 1421 1132149 - 1132170 + T 100 -11.7 -5.31275 | opp_overlap 1132149 1132134 TCGATTAATAAAAAA CACATCCTT TTAA AAGGATGTG TTTTTTATCATGCAA TERM 1422 1132170 - 1132149 - T 100 -11.7 -5.5112 | opp_overlap 1132149, overlap 1132134 TCGATTAATAAAAAA CACATCCTT TTAA AAGGATGTG TTTTTTATCATGCAA TERM 1423 1132203 - 1132216 + T 70 -3.9 -4.85599 | AACTTATAACTTGTC GAAAA AACT TTTTC TTTTTGTGCCATCAG dnaJ 1133117 - 1132191 - | DnaJ-class molecular chaperone TERM 1424 1132973 - 1132985 + g 79 -4.9 -5.13521 | CTGGTTCATGGTTAA TATCA GGA TGATA TTTTTTAGATAATTT TERM 1425 1133108 - 1133135 + g 100 -12.8 -4.48072 | opp_overlap 1133112, overlap 1133112 TCCACATTATGTACA CAAACCGCATCC ATCA GAATGCGGTTTG TTTTGTGCTAACTAT TERM 1426 1133112 - 1133131 + g 84 -7.8 -4.80453 | opp_overlap 1133112, overlap 1133108 CATTATGTACACAAA CCGCATCC ATCA GAATGCGG TTTGTTTTGTGCTAA TERM 1427 1133131 - 1133112 - G 86 -10 -4.07124 | opp_overlap 1133108 1133112 CATTATGTACACAAA CCGCATCC ATCA GAATGCGG TTTGTTTTGTGCTAA TERM 1428 1133165 - 1133176 + r 71 -3 -5.04249 | TATATTAAACAACGC GATT AATT AATC TTTCTTTTTTGAAGG LCK_01091 1135016 - 1133226 - | molecular chaperone TERM 1429 1134280 - 1134294 + g 77 -8.6 -3.84246 | TGTGCTTCGTTAGCT GAAGAC AAT GTCTTC TTTGCTGATTCAGCG LCK_01092 1135671 - 1135102 - | molecular chaperone GrpE (heat shock protein) hrcA 1136717 - 1135689 - | heat-inducible transcription repressor HrcA TERM 1430 1136832 - 1136796 - R 78 -7.5 -4.1299 | overlap 1136797 1136821 CTCAAAAAAAAGCAA CCTTTTTAGCACTCT TTTTATC AGAGTGCTAAAAAAC ACTTGATATCAATCA TERM 1431 1136831 - 1136797 - R 83 -11 -3.06167 | overlap 1136796 1136821 TCAAAAAAAAGCAAC CTTTTTAGCACTCT TTTTATC AGAGTGCTAAAAAA CACTTGATATCAATC TERM 1432 1136832 - 1136851 + r 80 -9.4 -3.57792 | opp_overlap 1136821 1136832 CAGAGTGCTAAAAAA CACTTGAT ATCA ATCAAGTG TTTCAAAATAGGTGC TERM 1433 1136851 - 1136832 - R 100 -9.4 -5.04385 | opp_overlap 1136832, overlap 1136821 CAGAGTGCTAAAAAA CACTTGAT ATCA ATCAAGTG TTTCAAAATAGGTGC ribF 1137791 - 1136841 - | riboflavin biosynthesis protein RibF truB 1138735 - 1137788 - | tRNA pseudouridine synthase B TERM 1434 1138075 - 1138101 + gr 83 -10.2 -3.16881 | opp_overlap 1138062 ACGTCATCCCGCTAC CCATCACGCGTT CTA AACGTGTCATGG TTGCTGGCATGCCTA TERM 1435 1138572 - 1138549 - GR 71 -5.2 -4.56736 | overlap 1138551 AGGCAACAACTAAAA CGCCTGACAC ATCT GGATCAAGCG TGCCAGCATGACCAA LCK_01096 1139198 - 1138683 - | phosphotransferase system IIA component araT2 1140392 - 1139214 - | aspartate/tyrosine/aromatic aminotransferase TERM 1436 1140168 - 1140188 + g 72 -8.9 -3.28001 | opp_overlap 1140161 1140163 1140157, overlap 1140163 ATATCTAACAGCCTC GGCGCGCAG GGA CTGTTCGCC TTGACTTTCAGCATA TERM 1437 1140447 - 1140468 + r 90 -8 -5.33848 | opp_overlap 1140447 1140441 ATTTTAACACAAAAA CGCTACCT CTAAAT GGGTAGCG TTTTTTCATTATAAT TERM 1438 1140468 - 1140447 - R 88 -7.3 -5.09762 | opp_overlap 1140447, overlap 1140441 ATTTTAACACAAAAA CGCTACC TCTAAATG GGTAGCG TTTTTTCATTATAAT rbfA 1140840 - 1140487 - | ribosome-binding factor A infB 1143408 - 1140886 - | translation initiation factor IF-2 TERM 1439 1141596 - 1141607 + g 85 -5.8 -5.21709 | overlap 1141580 CACGTTCTTCACCAG CTGC ACGT GCAG TTTTTTCGTCTGCCA LCK_01100 1144015 - 1143719 - | nucleic-acid-binding protein implicated in transcription termination nusA 1145162 - 1144071 - | transcription elongation factor ylxS 1145710 - 1145234 - | YlxS TERM 1440 1145804 - 1145774 - R 84 -6 -5.27923 | opp_overlap 1145774 CAATCCCATAAAAAA TGAGCCGGCCTCGT ACT AAATGGCCCGCTCA TTTACAAAACTATGT TERM 1441 1145897 - 1145881 - R 89 -6.5 -5.58522 | opp_overlap 1145881 TAGATAAAACAAAAA GACCACA ATG CGTGGCC TTTACTAGAATGTGA rpsN 1146316 - 1146047 - | ribosomal protein S14 rpmG 1146467 - 1146318 - | ribosomal protein L33 LCK_01105 1147510 - 1146605 - | inorganic pyrophosphatase/exopolyphosphatase TERM 1442 1147364 - 1147374 + g 71 -6.8 -3.98484 | opp_overlap 1147364, overlap 1147371 TTTAAAGTAATCCAA CGCA AAT TGCG TTTCTGCATTGGGTT parC 1149997 - 1147559 - | DNA topoisomerase IV, A subunit TERM 1443 1148404 - 1148414 + g 73 -8.2 -3.89695 | CTGGCAAATCATCAT CGGC TAA GCCG TTATCTTTATCAGAA TERM 1444 1149074 - 1149064 - G 73 -6.8 -4.15006 | opp_overlap 1149064 1149071 AGAGGTAGGTTAAAA TGCC ATT GGCA TTAGTGTCTTTATTG TERM 1445 1150091 - 1150068 - R 83 -9.6 -3.85835 | AAATAAATATGTAAA TACCGCGCAC AATT GTACACGGTA ATGGTTGTTTGGTCA parE 1152184 - 1150121 - | DNA topoisomerase IV, B subunit TERM 1446 1150790 - 1150802 + g 70 -7.7 -3.73611 | GTTTTTTAAGATATC GGCTA ACT TAGCC TTCTCTGTGTTTAAT TERM 1447 1151515 - 1151504 - G 70 -5.8 -4.48176 | opp_overlap 1151503 1151504 TAGAAAATTAACAAA GGAC TCAA GTCC CTTCTCATAATGATA LCK_01108 1152388 - 1152999 + | hypothetical protein TERM 1448 1153004 - 1153024 + T 100 -6.9 -5.95286 | opp_overlap 1153004 AAAAAAAATAAAAAA CCGATAG CTATTGT CTATCGG TTTTTTATTTTTGAT TERM 1449 1153024 - 1153004 - T 100 -6.9 -6.17033 | opp_overlap 1153004 AAAAAAAATAAAAAA CCGATAG CTATTGT CTATCGG TTTTTTATTTTTGAT dtd 1153478 - 1153029 - | D-tyrosyl-tRNA(Tyr) deacylase LCK_01110 1155732 - 1153495 - | guanosine polyphosphate pyrophosphohydrolase/synthetase TERM 1450 1154881 - 1154858 - G 76 -9 -3.65199 | gap 1 AATCGGCCAGGCAAA GGC-ATCCATT GGG AATGGATAGCC CCTAACACCGCATAA LCK_01111 1155943 - 1157184 + | major facilitator superfamily permease TERM 1451 1157191 - 1157214 + T 100 -10.4 -5.96894 | opp_overlap 1157191 ATCAAATAAAAAAAA GCGTTTTCTT TTGA AAGGAAACGC TTTTTTTATTTAGGT TERM 1452 1157214 - 1157191 - T 100 -8.2 -6.25578 | opp_overlap 1157191 ATCAAATAAAAAAAA GCGTTTTCTT TTGA AAGGAAACGC TTTTTTTATTTAGGT LCK_01112 1157520 - 1157224 - | hypothetical protein pyrAB 1160029 - 1157507 - | carbamoylphosphate synthase large subunit (split gene in MJ) pyrAA2 1161092 - 1160004 - | carbamoylphosphate synthase small subunit pyrR 1161675 - 1161148 - | pyrimidine operon attenuation protein/uracil phosphoribosyltransferase TERM 1453 1161303 - 1161319 + g 70 -9.5 -2.52896 | opp_overlap 1161300 CAGCTAAAGCTATTG TATTGGG ACG CCCAATA TGAATTAAAGCATCC rluD1 1162661 - 1161738 - | pseudouridylate synthase, 23S RNA-specific LCK_01117 1163040 - 1162639 - | hypothetical protein TERM 1454 1162844 - 1162831 - G 76 -6.7 -4.44608 | overlap 1162828 GCGACCTAAAAATAA TTGCG GTCC CGCAA TGTAGATACGACGAC TERM 1455 1163542 - 1163528 - g 78 -2.8 -5.3658 | ACCAGAAAAAGAAAA TCATGG CGC CCATTA TATGGCACTACAGGC LCK_01118 1163187 - 1163585 + | ribonuclease HI TERM 1456 1163602 - 1163570 - T 100 -14.4 -6.15828 | opp_overlap 1163570 1163574 GGCATTAAAAAAAAA TAAACGTCCCTCAT AAATG ATGAAGGACGTTTA TTTTTTACAGCAAGG TERM 1457 1163570 - 1163602 + T 100 -12.2 -5.00616 | opp_overlap 1163570, overlap 1163574 GGCATTAAAAAAAAA TAAACGTCCCTCAT AAATG ATGAAGGACGTTTA TTTTTTACAGCAAGG TERM 1458 1163574 - 1163598 + T 95 -8.6 -5.04249 | opp_overlap 1163570, overlap 1163570 TTAAAAAAAAATAAA CGTCCCTCAT AAATG ATGAAGGACG TTTATTTTTTACAGC LCK_01119 1164473 - 1163607 - | putative fructokinase TERM 1459 1164252 - 1164226 - G 79 -11 -3.16191 | opp_overlap 1164248, overlap 1164229 1164248 TTATAGCCTGACCAA CCATGTTTTGGC GTA GCCAAAACATAA CCGTATGTCTTTGAT TERM 1460 1164249 - 1164229 - G 83 -12.7 -2.78216 | opp_overlap 1164248, overlap 1164226 1164248 TAGCCTGACCAACCA TGTTTTGGC GTA GCCAAAACA TAACCGTATGTCTTT LCK_01120 1165780 - 1164512 - | Beta-fructosidase (levanase/invertase) TERM 1461 1165811 - 1165799 - R 74 -9.1 -3.08508 | opp_overlap 1165798 TACTCCTCAAAATTA TGCCG TAA CGGCA GTCTGTGCAGCAGTT scrA 1167778 - 1165796 - | phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific LCK_01122 1167928 - 1168902 + | transcriptional regulator TERM 1462 1168892 - 1168943 + T 88 -6.9 -5.14163 | gap 1, opp_overlap 1168895 1168909, overlap 1168895 1168909 TGGTTGTACGTGAAT CAACAGAATAAAAAAAACCTCTGC TTAAT GCAAAGGTTTTTTTGA-TCTGTTA TTTTTATTGATCACT TERM 1463 1168895 - 1168940 + T 93 -8.6 -4.66002 | gap 1, opp_overlap 1168895 1168909, overlap 1168892 1168909 TTGTACGTGAATCAA CAGAATAAAAAAAACCTCTGC TTAAT GCAAAGGTTTTTTTGA-TCTG TTATTTTTATTGATC TERM 1464 1168940 - 1168895 - T 87 -10.8 -3.35813 | gap 1, opp_overlap 1168892 1168895 1168909, overlap 1168909 TTGTACGTGAATCAA CAGAATAAAAAAAACCTCTGC TTAAT GCAAAGGTTTTTTTGA-TCTG TTATTTTTATTGATC TERM 1465 1168927 - 1168909 - T 100 -6.7 -6.19302 | opp_overlap 1168895 1168892 1168909, overlap 1168895 ACAGAATAAAAAAAA CCTCTGC TTAAT GCAAAGG TTTTTTTGATCTGTT TERM 1466 1168909 - 1168927 + T 85 -4.5 -5.62219 | opp_overlap 1168909 1168895, overlap 1168895 1168892 ACAGAATAAAAAAAA CCTCTGC TTAAT GCAAAGG TTTTTTTGATCTGTT xylH 1169132 - 1168947 - | putative tautomerase LCK_01124 1170128 - 1169148 - | YitT family protein TERM 1467 1169535 - 1169504 - G 75 -9.6 -3.34962 | CTTTAGACGTCACAA TCATAGCGGTTATC TTCT GATAACCGGTATAA ATGGCATCAACTGCG TERM 1468 1170047 - 1170037 - G 72 -3.2 -5.14563 | TTGGGGATTAAAAAA GCAT TTA ACGC CAACACTTGAATTAC TERM 1469 1170199 - 1170182 - R 84 -5.5 -5.58179 | opp_overlap 1170182, overlap 1170175 CATCATAACAAAAAA GCAACGA CTTG TCGTGGC TTTTCAGTAACTAGA glnA 1171593 - 1170247 - | glutamine synthetase, type I LCK_01126 1171974 - 1171639 - | transcriptional regulator TERM 1470 1172005 - 1172021 + r 81 -8.1 -4.11692 | opp_overlap 1172015, overlap 1172008 AACATACTTTTATTT TAATGCA AAA TGCATTA TTTTGCACATACGTG TERM 1471 1172089 - 1172075 - R 86 -5.7 -5.69793 | opp_overlap 1172075 ATAGTAAATAAAAAA CGTAC ATACA GTACG TTTATTTGGCATCAT polA 1174772 - 1172091 - | DNA polymerase I TERM 1472 1172240 - 1172228 - G 74 -6.3 -4.40561 | opp_overlap 1172227, overlap 1172225 GTGCTTCAAAAATAA GTTCA TCG TGAAC CTGTAGTAGAATATT TERM 1473 1174143 - 1174156 + g 72 -3.1 -5.03747 | GTGATAGGTCTTCAA CAGTT TTAA AGCTG TTTTTTCACCAATTT TERM 1474 1174812 - 1174825 + r 70 -8.1 -3.26844 | opp_overlap 1174812, overlap 1174811 AGTGTAACAAAAAAA CAGCC TACA GGCTG CTTTTACTTGATAAA TERM 1475 1174825 - 1174812 - R 100 -8.1 -5.80364 | opp_overlap 1174811 1174812 AGTGTAACAAAAAAA CAGCC TACA GGCTG CTTTTACTTGATAAA LCK_01128 1175570 - 1174851 - | integral membrane protein, interacts with FtsH TERM 1476 1175725 - 1175689 - R 76 -7.5 -3.94989 | gap 1, opp_overlap 1175689 TAAAGATACATTAAA GCACTTAGTAT-ATCG CGAATC CGTTCATACTAAGTGC TCACTTTGATTATTG murC1 1177069 - 1175735 - | UDP-N-acetylmuramate--alanine ligase TERM 1477 1176713 - 1176723 + g 71 -6.8 -4.13767 | GTGTGCTAATAGCCC CGTC GTT GACG TTTTGCCGTGCGCAC LCK_01130 1177867 - 1177211 - | EMAP domain-containing protein TERM 1478 1177928 - 1177946 + r 83 -10.2 -3.15197 | opp_overlap 1177930, overlap 1177930 GTACAATAATGATAA AAGGCCGC ATA GCGGCCTG TGTTACGCTTTATTA TERM 1479 1177944 - 1177930 - R 100 -12.8 -4.6265 | opp_overlap 1177928 1177930 ACAATAATGATAAAA GGCCGC ATA GCGGCC TGTGTTACGCTTTAT TERM 1480 1177930 - 1177944 + r 87 -12.8 -3.12471 | opp_overlap 1177930, overlap 1177928 ACAATAATGATAAAA GGCCGC ATA GCGGCC TGTGTTACGCTTTAT LCK_01131 1178623 - 1177949 - | nucleoside phosphorylase LCK_01132 1178965 - 1178669 - | hypothetical protein LCK_01133 1179518 - 1178967 - | NTP pyrophosphohydrolase including oxidative damage repair enzymes cspD 1179745 - 1179521 - | cold shock protein TERM 1481 1179781 - 1179767 - R 83 -4.9 -5.52986 | opp_overlap 1179762 1179767 ATTGTATCAAAAAAA CCACC ATTTA GGCGG TTTTCTTTTGATAAA LCK_01135 1181362 - 1179827 - | permease TERM 1482 1180868 - 1180882 + g 76 -7 -4.45664 | opp_overlap 1180867 AAACAGACCAATACC GCCGCC GAT GGCCGC TTTTAATTCAGTTGG TERM 1483 1180987 - 1180969 - G 74 -5.3 -4.71426 | gap 1 CGCCGACCAAGAAAA CAAC-GGC CAAG GCCTGTTG CCAACTGAAGCCAAA TERM 1484 1181142 - 1181131 - G 89 -5.8 -5.40072 | TGGCGGCCAAAAAAA CAGC CTGT GCTG GTATACCAGCTTGAC TERM 1485 1181334 - 1181304 - G 100 -13.4 -4.55287 | CCCATTGACACAAAA GTTCGCCCACCA AAAATCA TGATGGGCGAAC CAAATTCATATTTTT LCK_01136 1182400 - 1181444 - | glycosyltransferase TERM 1486 1182397 - 1182424 + g 74 -4.2 -5.06451 | TCGTTTCCTCTGGGT TCATATCAAGTC CTTT GAATTGAAATGA TTTTTTACCATCATC TERM 1487 1182466 - 1182454 - R 91 -4.8 -5.84381 | opp_overlap 1182454 1182449 CTACCAATAAAAAAA GACG GTATG CGTC TTTTAATTACTTGGC tagD1 1182904 - 1182473 - | glycerol-3-phosphate cytidylyltransferase TERM 1488 1182745 - 1182759 + g 75 -2.9 -5.24291 | overlap 1182741 1182750 GCTGTTTACGCTTTT CATAT GAAAA ATATG TTTTCTTTTGCTTTT LCK_01138 1183867 - 1182923 - | cell wall biosynthesis glycosyltransferase TERM 1489 1183658 - 1183638 - G 77 -7.7 -4.25104 | GCTTCTTTACCAAAA TTTCTTGAG AAA CTCAAAAAA TGAACGTTGCTATCT glf 1185105 - 1183915 - | UDP-galactopyranose mutase TERM 1490 1185220 - 1185199 - R 100 -10.3 -5.51046 | opp_overlap 1185199 CAAACAGATAAAAAA GTATTCTCA ATCA TGAGAATAC TTAATATATTATATC TERM 1491 1185199 - 1185220 + r 85 -10.3 -3.41262 | opp_overlap 1185199 CAAACAGATAAAAAA GTATTCTCA ATCA TGAGAATAC TTAATATATTATATC LCK_01140 1186831 - 1185257 - | putative teichoic acid/polysaccharide glycosyl transferase TERM 1492 1186271 - 1186259 - G 89 -5.5 -5.38047 | overlap 1186260 GACCCATATAAAAAA CGCAC AAA ATGCG CCAATTAGGGAATAT cps1D 1187636 - 1186854 - | glycosyltransferase epsE1 1188332 - 1187697 - | sugar transferase involved in lipopolysaccharide synthesis TERM 1493 1187893 - 1187881 - G 70 -3.3 -4.97405 | overlap 1187882 ACTGATAAAAACAAA TCGAC TTG GTCGC CATATTCTTTTAACT ampM 1189136 - 1188348 - | methionine aminopeptidase, type I TERM 1494 1188899 - 1188914 + g 74 -9 -3.53712 | overlap 1188895 GCAAGCCTTTACGTG GTAGCC CATG GGCTAC TTCATTGTTGACACT TERM 1495 1189271 - 1189256 - R 89 -6.8 -5.626 | GAGTCTATAAAAAAA GCAACC ATAC GGCTGC CTAGTAATGCTGTTG glk 1190250 - 1189291 - | glucokinase LCK_01145 1190622 - 1190410 - | hypothetical protein LCK_01146 1191308 - 1190619 - | small hydrophobic molecule transporter protein, putative TERM 1496 1191131 - 1191108 - G 81 -7.4 -4.65895 | overlap 1191110 GCCCGCATGCAAAAA CACTGGCGTT AGTA ATCGCCAGTA AGCTTGATTGTGAGC TERM 1497 1191129 - 1191110 - G 73 -7.8 -3.94812 | overlap 1191108 CCGCATGCAAAAACA CTGGCGTT AGTA ATCGCCAG TAAGCTTGATTGTGA rexA 1195056 - 1191346 - | ATP-dependent exoDNAse beta subunit rexB 1198574 - 1195059 - | ATP-dependent nuclease, subunit B TERM 1498 1195876 - 1195888 + g 71 -4.1 -4.97461 | opp_overlap 1195873 TTAGCTAAATAATGC TGTGT GGC ACGCA TTTTTCCTGTTTCTT TERM 1499 1198657 - 1198623 - R 89 -11.7 -3.41602 | opp_overlap 1198631 1198655, overlap 1198631 CCCATTTTATCACAA CAAAAAAACACGC AAAATATAA GCGTGTTTTTTTG TCAACGACGATCTTT TERM 1500 1198649 - 1198631 - R 89 -3.1 -5.89921 | opp_overlap 1198631, overlap 1198623 ATCACAACAAAAAAA CACGC AAAATATAA GCGTG TTTTTTTGTCAACGA TERM 1501 1198631 - 1198649 + r 82 -3.1 -5.60993 | opp_overlap 1198631 1198623 ATCACAACAAAAAAA CACGC AAAATATAA GCGTG TTTTTTTGTCAACGA LCK_01149 1199227 - 1198658 - | hypothetical protein TERM 1502 1198848 - 1198862 + g 79 -8.6 -4.13014 | GCAGCATATTCATCA GCATCT AAT AGATGC TTTTCACCGTCTGGA TERM 1503 1199193 - 1199207 + g 71 -7.1 -3.80625 | overlap 1199196 GTGATGAAATCACCC TCGCG CGGTC CGCGA TTTGACTTATCAAAA LCK_01150 1199568 - 1199296 - | hypothetical protein TERM 1504 1199514 - 1199525 + g 79 -5.8 -4.87328 | opp_overlap 1199507 CAATATTATCAAGCT GTGC TTGT GCAC TTTTCTGTTTATCTG LCK_01151 1200371 - 1199571 - | RecX family regulatory protein TERM 1505 1200436 - 1200424 - R 95 -6.2 -6.48081 | TTTACAAAAAAAAAA GCGC TATAT GCGC TATAACACTTTGTCA dapB 1201161 - 1200436 - | dihydrodipicolinate reductase dapA 1202036 - 1201161 - | dihydrodipicolinate synthase LCK_01154 1203201 - 1202038 - | metal-dependent amidase/aminoacylase/carboxypeptidase dapD 1203905 - 1203201 - | tetrahydrodipicolinate N-succinyltransferase lysA 1205225 - 1203924 - | diaminopimelate decarboxylase TERM 1506 1205319 - 1205285 - R 100 -15.8 -5.1244 | opp_overlap 1205285 TTATCAACATAAAAA GCCTTTTGTTCGAGAC ATG GTCACGGACAAAAGGC TTTTGCTTAGCAATT TERM 1507 1205285 - 1205319 + r 100 -18 -4.41895 | opp_overlap 1205285 TTATCAACATAAAAA GCCTTTTGTTCGAGAC ATG GTCACGGACAAAAGGC TTTTGCTTAGCAATT LCK_01157 1205908 - 1205573 - | hypothetical protein LCK_01158 1207294 - 1205918 - | nicotinic acid phosphoribosyltransferase TERM 1508 1206684 - 1206661 - G 70 -8.2 -3.695 | CTGAAACACCGTAAA CTGCCTCAAA ATAA CTTGAAGCAG CCATATTATCTGAAC LCK_01159 1207839 - 1207291 - | transcriptional regulator TERM 1509 1207875 - 1207860 - R 85 -6.8 -5.23316 | opp_overlap 1207860 TATTATACTAAAAAA GCTACC CTCA GGCAGC TTTACTTTTTTGATT TERM 1510 1207885 - 1207896 + r 89 -3 -5.94713 | GGCAGCTTTACTTTT TTGA TTGA TCAA TTTTTTTTGTACGAT LCK_01160 1208554 - 1207877 - | DedA family protein TERM 1511 1208874 - 1208862 - g 78 -4.1 -5.30189 | overlap 1208854 1208852 GATAATAGTAAAAAA TTACC AGG GGCAA AAAATATTTATTTAG LCK_01161 1208796 - 1209332 + | putative nucleoside deoxyribosyltransferase LCK_01162 1209426 - 1210241 + | nicotinamide mononucleotide transporter TERM 1512 1210255 - 1210229 - f 71 -3.1 -5.02476 | gap 1, opp_overlap 1210230 1210231, overlap 1210231 ACAGCTTGCAAAAAA CAGTGTCAAG TAAAAAAC CTTGACAC-G ATTTTTTAAAAACCT TERM 1513 1210254 - 1210231 - f 71 -6.8 -4.13963 | opp_overlap 1210230 1210231, overlap 1210229 AGCTTGCAAAAAACA GTGTCAAG TAAAAAAC CTTGACAC GATTTTTTAAAAACC rpmF 1210339 - 1210509 + | ribosomal protein L32 TERM 1514 1210550 - 1210515 - f 85 -12.1 -3.01783 | opp_overlap 1210520, overlap 1210520 TGAAAAGTAATCACA TAAAAGCCTACTTCT TAAATT AGAAGTAGGCTTTTT ATTTCCTTTACATAA TERM 1515 1210545 - 1210520 - f 100 -12 -4.62002 | opp_overlap 1210520, overlap 1210515 AGTAATCACATAAAA GCCTACTTCT TAAATT AGAAGTAGGC TTTTTATTTCCTTTA TERM 1516 1210520 - 1210545 + F 100 -12 -5.41941 | opp_overlap 1210515 1210520 AGTAATCACATAAAA GCCTACTTCT TAAATT AGAAGTAGGC TTTTTATTTCCTTTA TERM 1517 1210633 - 1210601 - f 72 -9.3 -2.75992 | overlap 1210598 TCTCATTTAACATCA TCATGTCACTTTTGT GGT AGAATAGTGACATGA CAATTACAATTAGAG cutC 1210630 - 1211265 + | copper homeostasis protein TERM 1518 1211295 - 1211323 + F 86 -8.3 -4.67353 | opp_overlap 1211295 TAAATATTGATTGAA TGGTCGCTTTA ATTATTA TAAAGTGACCA TTTTTAAATGACTAG LCK_01165 1211378 - 1213075 + | RNA-binding protein TERM 1519 1213152 - 1213133 - f 83 -10.8 -2.98823 | TGTTTCGTACAGATA GCATGTGT TAAA ACACATGC CGACAAAAGAGGCGT TERM 1520 1213198 - 1213161 - f 100 -20.9 -4.39426 | opp_overlap 1213161 CACATGCCGACAAAA GAGGCGTGACATTATCT TTTT AGATAATGTCACACCTC TTTTTATTTTTTTAA TERM 1521 1213161 - 1213198 + F 100 -18.7 -5.86609 | opp_overlap 1213161 CACATGCCGACAAAA GAGGCGTGACATTATCT TTTT AGATAATGTCACACCTC TTTTTATTTTTTTAA TERM 1522 1214063 - 1214097 + G 70 -5.9 -4.33258 | opp_overlap 1214070, overlap 1214065 CAAATTATTTGCAGT TATATCAGCAACA TAATGCGAC TGTTGCTGGTATG TTTATGTTTCCAGGT TERM 1523 1214134 - 1214150 + G 77 -8 -4.22375 | ATCGGCGCACTGCTT GCACCA ATAGC TGGTGC TTTGTTAGATCGTAT LCK_01166 1213225 - 1214568 + | EmrB/QacA family drug resistance transporter TERM 1524 1214612 - 1214562 - T 100 -18.9 -5.40072 | gap 2, opp_overlap 1214571 1214573 1214581, overlap 1214565 1214566 TGTTCGCCAAAAAAA GAATTAGGATACTAAAAAAGTTCGC AAT GCGAACTTTTTTAGTATCCTA-T-C GGTAAAAACATATGG TERM 1525 1214611 - 1214565 - T 100 -24.2 -4.79949 | opp_overlap 1214571 1214573 1214581, overlap 1214562 1214566 TCGCCAAAAAAAGAA TTAGGATACTAAAAAAGTTCGC AAT GCGAACTTTTTTAGTATCCTAT CGGTAAAAACATATG TERM 1526 1214610 - 1214566 - T 100 -27.7 -3.46885 | opp_overlap 1214571 1214573 1214581, overlap 1214565 1214562 CGCCAAAAAAAGAAT TAGGATACTAAAAAAGTTCGC AAT GCGAACTTTTTTAGTATCCTA TCGGTAAAAACATAT TERM 1527 1214571 - 1214605 + T 100 -20.4 -2.64616 | opp_overlap 1214566 1214565 1214562, overlap 1214573 1214581 AAAAAAGAATTAGGA TACTAAAAAAGTTCGC AAT GCGAACTTTTTTAGTA TCCTATCGGTAAAAA TERM 1528 1214573 - 1214603 + T 100 -18.6 -2.8655 | opp_overlap 1214566 1214565 1214562, overlap 1214571 1214581 AAAAGAATTAGGATA CTAAAAAAGTTCGC AAT GCGAACTTTTTTAG TATCCTATCGGTAAA TERM 1529 1214581 - 1214595 + T 100 -10 -5.23316 | opp_overlap 1214566 1214565 1214562, overlap 1214573 1214571 TAGGATACTAAAAAA GTTCGC AAT GCGAAC TTTTTTAGTATCCTA argF 1215616 - 1214600 - | ornithine carbamoyltransferase TERM 1530 1214732 - 1214746 + g 71 -4.2 -4.90217 | overlap 1214734 GTCAGTAATTTCCAT TTCGGT TAA ACCGTA TTTTTCATATATTTG TERM 1531 1214734 - 1214744 + g 71 -6.8 -4.04813 | overlap 1214732 CAGTAATTTCCATTT CGGT TAA ACCG TATTTTTCATATATT argH 1217001 - 1215613 - | argininosuccinate lyase TERM 1532 1217061 - 1217076 + r 95 -9 -5.54079 | TCCCTATTTATGTAC GATGGC TTTC GCCATC TTTTTTAATTTTTAA argG 1218313 - 1217081 - | argininosuccinate synthase TERM 1533 1218445 - 1218463 + r 77 -6 -4.82128 | opp_overlap 1218445, overlap 1218440 TTTGCAATAAAAAAA GCAGATAA CCT TAATCTGC TTTTCTATTTCGTCA TERM 1534 1218463 - 1218445 - R 93 -6 -5.7946 | opp_overlap 1218445 1218440 TTTGCAATAAAAAAA GCAGATAA CCT TAATCTGC TTTTCTATTTCGTCA LCK_01170 1219448 - 1218468 - | transcriptional regulator TERM 1535 1219270 - 1219290 + g 70 -8.3 -3.30474 | overlap 1219272 TCAGCTTTTTTCGTT GTTGCAGAA GGT TTCTGCATC TTACTAATTGTGCGA TERM 1536 1219272 - 1219288 + g 73 -9.5 -3.21684 | overlap 1219270 AGCTTTTTTCGTTGT TGCAGAA GGT TTCTGCA TCTTACTAATTGTGC mgtE 1220874 - 1219510 - | magnesium transporter TERM 1537 1219697 - 1219680 - G 71 -7.1 -3.95324 | GATTCGCAACAATAA TAGCAAT TGTC ATTGCTA ATCCTACAGCAAAGC rluD2 1221815 - 1220913 - | pseudouridylate synthase, 23S RNA-specific TERM 1538 1221005 - 1221025 + g 88 -9.1 -4.58395 | opp_overlap 1221010 CGTAAAAACGCATGT GATAAGCAT GTA ATGCTTGTC TTTTTAAGCCATGCC TERM 1539 1221593 - 1221578 - G 74 -6.2 -4.41633 | CATTTTCAAAAATAA TATCGA GTGG TCGATA ATCAGGCACAACTAA ppnK 1222685 - 1221888 - | sugar kinase TERM 1540 1222514 - 1222498 - G 74 -5.1 -4.72029 | overlap 1222500 TGTAAGCCAACAAAA CGGATTG TAT CAATCTG ATCGACGTAATGCTG LCK_01174 1223317 - 1222682 - | GTP pyrophosphokinase TERM 1541 1223322 - 1223362 + H 87 -10 -3.94051 | gap 1, opp_overlap 1223321, overlap 1223315 TCTTTATTCACATAG TTATGCTGCCCTATATCTG TATG CA-ATATAGCGCAGCATGA TTGTTCGTTTAGTTT LCK_01175 1223508 - 1224092 + | polyketide biosynthesis dithiol-disulfide isomerase LCK_01176 1224101 - 1224817 + | methionine aminopeptidase TERM 1542 1224846 - 1224815 - T 100 -19 -3.64822 | opp_overlap 1224815 ATTTTCCTAGTTAAA TAGGGTAAGAACAC TTAA GTGTTCTTACCCTA TTTTTTAATATGTCA TERM 1543 1224815 - 1224846 + T 100 -19 -5.24989 | opp_overlap 1224815 ATTTTCCTAGTTAAA TAGGGTAAGAACAC TTAA GTGTTCTTACCCTA TTTTTTAATATGTCA apt 1225423 - 1224851 - | adenine phosphoribosyltransferase recJ 1227434 - 1225470 - | single-stranded-DNA-specific exonuclease RecJ TERM 1544 1227311 - 1227295 - G 72 -8.7 -3.48276 | opp_overlap 1227303, overlap 1227300 GTCGGCTGCAGATAA CCAAAGG CAG CCTCTGG CGTCGTATAGCCTTT LCK_01179 1228414 - 1227446 - | beta-lactamase superfamily hydrolase TERM 1545 1228246 - 1228269 + g 83 -7.4 -4.71482 | overlap 1228249 AAATAAAGATTTTTT CAACTTTGCG CGGA CGCAAGGTGG TTTTTAAAATTTGAT TERM 1546 1228309 - 1228279 - G 88 -10.7 -4.07687 | gap 1 AGGTGGTTTTTAAAA TTTGATGTTGCGTG GCTT CAC-CAACATCAAA TAACCAGACTGCGTT TERM 1547 1228356 - 1228313 - G 73 -7.6 -4.09455 | gap 1 ACCAACATCAAATAA CCAG-ACTGCGTTACGCTCAT CTA ATAAACGCAAAGCAATACTGG TAACATTTCTAAATT TERM 1548 1228563 - 1228575 + r 72 -9.1 -2.60244 | opp_overlap 1228563, overlap 1228560 ATACAAAATAAAAAA CAGCC TTT GGCTG TCGATTACTTGCCCC TERM 1549 1228575 - 1228563 - R 100 -9.1 -5.8901 | opp_overlap 1228563 1228560 ATACAAAATAAAAAA CAGCC TTT GGCTG TCGATTACTTGCCCC msrA 1229110 - 1228580 - | peptide methionine sulfoxide reductase TERM 1550 1229152 - 1229135 - R 89 -7.1 -5.34555 | opp_overlap 1229135 GTAGATGATAAAAAA GAGAAAA ATTA TTTTCTC TTCATGATACTATAA panE2 1230238 - 1229174 - | 2-dehydropantoate 2-reductase araD 1231016 - 1230294 - | ribulose-5-phosphate 4-epimerase LCK_01183 1232643 - 1231021 - | sugar (pentulose and hexulose) kinase TERM 1551 1232587 - 1232616 + g 75 -2.8 -5.33331 | gap 1, overlap 1232589 CGATCCAAATTCCAC GCCTAATGCCACC TGTCC GGTTGCAAT-GGC TTTTTCTTGTATTTG TERM 1552 1232707 - 1232677 - R 100 -10.6 -4.13767 | opp_overlap 1232676 1232677, overlap 1232661 TTTTTCATTTGAAAA CGCTAACCAGAT TGTCTTT ATCTGATTAGCG CATTATTTTGTTTCA LCK_01184 1234119 - 1232740 - | major facilitator superfamily permease TERM 1553 1233379 - 1233394 + g 70 -3.2 -4.98522 | opp_overlap 1233356 1233380, overlap 1233380 CTTACTCGAGAAAAG TGTCGC TAAG GTGACG TTTTTCTGTGCGCTT araA 1235555 - 1234131 - | L-arabinose isomerase TERM 1554 1235079 - 1235119 + g 70 -3.4 -4.89477 | gap 1 CATCCACTTGCCAAT TTGTTCTTGGATTGCTGGG TCAC CCCAGTGG-CCAAAAATAA TTTTATTGTTCAACC TERM 1555 1235758 - 1235725 - R 89 -3.3 -5.82281 | AAATAGATAAAAAAA TAAAGCTTAATGC GCAGAAAG GCACCAAACTTTA TTTTTTTATGAGCTT araR 1236903 - 1235812 - | arabinose operon repressor TERM 1556 1237137 - 1237119 - R 79 -4.5 -5.243 | opp_overlap 1237119, overlap 1237108 CAAATCACTAAAAAA GCGCC AACTTATCG GGCGC TTTCTAGTAATTTTT LCK_01187 1238501 - 1237164 - | integral membrane protein LCK_01188 1240024 - 1238588 - | deoxyribodipyrimidine photolyase LCK_01189 1241096 - 1240035 - | aspartate/tyrosine/aromatic aminotransferase LCK_01190 1241250 - 1241807 + | transcriptional regulator LCK_01191 1242072 - 1243766 + | 67 kDa myosin-cross-reactive antigen like precursor TERM 1557 1243783 - 1243805 + T 100 -12.1 -5.2189 | opp_overlap 1243783 CAATAGAATAAAAAA GCGACCAAT TTTTC ATTGGTCGC TTTTTTAATGGTTCA TERM 1558 1243805 - 1243783 - T 100 -12.1 -5.64304 | opp_overlap 1243783 CAATAGAATAAAAAA GCGACCAAT TTTTC ATTGGTCGC TTTTTTAATGGTTCA rfbD 1244657 - 1243818 - | dTDP-4-dehydrorhamnose reductase TERM 1559 1244685 - 1244699 + r 85 -8.6 -4.18058 | opp_overlap 1244685 CTCCTAGACAAAAAA CTCACA AGA TGTGAG TTTTGCAGTATCATT TERM 1560 1244699 - 1244685 - R 95 -8.6 -5.36441 | opp_overlap 1244685 CTCCTAGACAAAAAA CTCACA AGA TGTGAG TTTTGCAGTATCATT rfbB 1245750 - 1244713 - | dTDP-glucose 4,6-dehydratase cpsM 1246417 - 1245824 - | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 1561 1246212 - 1246229 + g 74 -6.3 -4.34789 | CCACGCAAAACCCCT TGTCTTG ATAA CGAGACA TTATTTTGTAGCTTA TERM 1562 1246380 - 1246390 + g 70 -5.4 -4.40561 | opp_overlap 1246359 ATATCAGTAATTTTC CTTG CCG CAAG TTCTTTTTCAAAAAA rfbA2 1247310 - 1246438 - | glucose-1-phosphate thymidylyltransferase TERM 1563 1247290 - 1247320 + g 71 -6.1 -4.1523 | TGTGCCGGAACCTCC GGCGAGGATGATG CCTTT CATTTTCCTCTCC TTTATGTATGCTAGA cps2I 1249560 - 1248013 - | repeat unit transporter TERM 1564 1248847 - 1248859 + g 72 -3.4 -5.17744 | CATTTTTGCTGATAG CATC CCACC GATG TTTTTCTTCATGTAT cps1B 1250650 - 1249553 - | polysaccharide biosynthesis protein TERM 1565 1249871 - 1249861 - G 90 -3.2 -5.95539 | TTGGAAACAAAAAAA CAGA AGA CCTG TTATATATATTTCTT LCK_01198 1251704 - 1250763 - | putative glycosyl transferase TERM 1566 1251539 - 1251552 + g 81 -2.5 -5.64304 | overlap 1251535 AGTTATTTATATTAT TTTTA AAAA TAAAA TTTTTTATTATGTTA LCK_01199 1252772 - 1251711 - | cell wall biosynthesis glycosyltransferase LCK_01200 1254012 - 1252759 - | oligosaccharide repeat-containing polymerase TERM 1567 1253291 - 1253265 - G 85 -3.9 -5.68438 | overlap 1253258 TGACCAAAGAAAAAA CTGAAATTT TTCCTTTTG AAATTTCAG CACCTAGATTTAACA LCK_01201 1255032 - 1254061 - | putative glycosyl transferase tagD2 1255575 - 1255162 - | glycerol-3-phosphate cytidylyltransferase licD 1256411 - 1255572 - | LicD family phosphotransferase TERM 1568 1255992 - 1255980 - GR 71 -6.3 -4.19472 | TAACATACGGTAAAA CAACA CTT TGTTG ATAAATAATTTGCGT LCK_01204 1257582 - 1256365 - | glycosyltransferase TERM 1569 1256797 - 1256815 + gr 79 -3.2 -5.43866 | overlap 1256801 AGAAGTTGTTTGTAG TAACTTCT GAT AGAATTTA TTTTTTTCAACATTA TERM 1570 1256801 - 1256811 + gr 78 -4 -5.20328 | overlap 1256797 GTTGTTTGTAGTAAC TTCT GAT AGAA TTTATTTTTTTCAAC epsE2 1258195 - 1257584 - | sugar transferase involved in lipopolysaccharide synthesis TERM 1571 1257762 - 1257772 + g 79 -6.8 -4.55887 | ATACCAGGCTTTACT GCCA ATC TGGC TTTATCTTTTTCAGA epsC 1258975 - 1258220 - | exopolysaccharide biosynthesis protein TERM 1572 1258469 - 1258485 + g 75 -9.5 -3.3903 | opp_overlap 1258468 1258466 1258465 1258469 GACATCAAAAATCAC GAGATCA TAA TGATCTC TTAGTTGCGTAATTA TERM 1573 1258485 - 1258469 - G 70 -9.5 -2.57672 | opp_overlap 1258469, overlap 1258468 1258466 1258465 GACATCAAAAATCAC GAGATCA TAA TGATCTC TTAGTTGCGTAATTA epsB 1259885 - 1258992 - | capsular polysaccharide biosynthesis protein LCK_01208 1260678 - 1259911 - | hypothetical protein TERM 1574 1260901 - 1260880 - R 93 -5.9 -5.77571 | opp_overlap 1260885, overlap 1260881 ATCAAAAAATAAAAA GCGAACAAT ATTA ATTGTTCGT TAACGTTCTGTAATA TERM 1575 1260900 - 1260881 - R 85 -9.4 -4.02882 | opp_overlap 1260885, overlap 1260880 TCAAAAAATAAAAAG CGAACAAT ATTA ATTGTTCG TTAACGTTCTGTAAT TERM 1576 1260932 - 1260970 + r 80 -9.1 -3.66896 | gap 1, opp_overlap 1260967 TAAGAATTTTGTCAA CGTGATTTACTC-ATGCT TGAT ATCATCGAGTAAATCGCG TTCTGTCTGTGTAAG trmD 1261663 - 1260938 - | tRNA (guanine-N1)-methyltransferase TERM 1577 1260977 - 1260992 + g 70 -5.4 -4.38154 | opp_overlap 1260967 TAAATCGCGTTCTGT CTGTGT AAGA ACACGG TTTTCTAGCAAGTCT rimM 1262181 - 1261663 - | RimM protein, required for 16S rRNA processing TERM 1578 1262244 - 1262215 - R 100 -18.1 -4.39166 | opp_overlap 1262215 CTTTACAGACGAAAA GTCGCAGATATTG GATT CAATATCTGCGAC TTTTGTCACTACAAT TERM 1579 1262215 - 1262244 + r 100 -18.1 -4.42653 | opp_overlap 1262215 CTTTACAGACGAAAA GTCGCAGATATTG GATT CAATATCTGCGAC TTTTGTCACTACAAT LCK_01211 1267667 - 1262292 - | dextransucrase TERM 1580 1264921 - 1264938 + g 100 -7.1 -5.72053 | TAGTACGTCTTGCCA TCAACAA TAAC TTGTTGA TTTTTTATTTGGTTA TERM 1581 1267208 - 1267218 + g 71 -4 -4.92385 | AGAAATAATAATTTT TATC GTG GATA TTTTGTTTACCTGTC LCK_01212 1270838 - 1267755 - | dextransucrase TERM 1582 1270594 - 1270613 + g 75 -7.8 -4.12188 | overlap 1270597 1270610 ACCGGTGTCGCTGGC GTTGTGGC TACT GCCACTAC TTTTGCCGCTCCTAA TERM 1583 1270911 - 1270889 - R 85 -6.4 -5.27923 | opp_overlap 1270905 TAATTTTAGAAAAAA TAAAAAACCA CCA TGGTTTTGTA AAAATGATTAACCTT LCK_01214 1272239 - 1271469 - | transposase LCK_01215 1272571 - 1272296 - | transposase TERM 1584 1272326 - 1272344 + g 72 -4.6 -4.79174 | GCCCAGCAAAACGGC CGCAATTT TTA AAATTTCG TTTTCTTCCTTGAGT TERM 1585 1272424 - 1272439 + g 70 -3.2 -5.00616 | overlap 1272425 TGCCATTCATGTCAG TCCCAA CGAT TTGGGC TTTTTTGACCCAACC TERM 1586 1273245 - 1273205 - R 93 -10.7 -3.96298 | opp_overlap 1273211, overlap 1273210 1273211 CAGTCAGTAACGAAA CAAAAGCACGATATTCTAT CGG ATAGAATACCGTGTTTTTT ATAAATTAGCTTCAT TERM 1587 1273240 - 1273210 - R 100 -10.6 -5.00851 | opp_overlap 1273211, overlap 1273205 1273211 AGTAACGAAACAAAA GCACGATATTCTAT CGG ATAGAATACCGTGT TTTTTATAAATTAGC TERM 1588 1273239 - 1273211 - R 100 -14.1 -3.58884 | opp_overlap 1273211, overlap 1273210 1273205 GTAACGAAACAAAAG CACGATATTCTAT CGG ATAGAATACCGTG TTTTTTATAAATTAG TERM 1589 1273211 - 1273239 + r 100 -11.9 -5.31456 | opp_overlap 1273211 1273210 1273205 GTAACGAAACAAAAG CACGATATTCTAT CGG ATAGAATACCGTG TTTTTTATAAATTAG ogt 1273812 - 1273315 - | methylated DNA-protein cysteine methyltransferase LCK_01218 1275793 - 1273874 - | PTS system, fructose-specific IIABC component TERM 1590 1274526 - 1274536 + g 74 -4 -5.1101 | opp_overlap 1274526 AAAGATTTCGGCAAA CTTT GGA AAAG TTTTTTAAGTAATAA fruB 1276720 - 1275803 - | fructose 1-phosphate kinase fruR 1277481 - 1276717 - | lactose phosphotransferase system repressor TERM 1591 1277223 - 1277237 + g 100 -5.6 -5.72053 | overlap 1277224 CTTGTAATTGTTGTG CTGCGC GTT GCGCAA TTTTTTGTTTCGTTG TERM 1592 1277224 - 1277236 + g 83 -9.1 -4.00791 | overlap 1277223 TTGTAATTGTTGTGC TGCGC GTT GCGCA ATTTTTTGTTTCGTT TERM 1593 1277610 - 1277592 - R 100 -10.4 -5.626 | opp_overlap 1277592 CATGTCACAAAAAAA GCAATCAA TTC TTGATTGC TTTTTAATAGTTTAT TERM 1594 1277592 - 1277610 + r 100 -10.4 -4.85267 | opp_overlap 1277592 CATGTCACAAAAAAA GCAATCAA TTC TTGATTGC TTTTTAATAGTTTAT LCK_01221 1278218 - 1277622 - | 5 nucleotidase, deoxy, cytosolic type C TERM 1595 1278325 - 1278360 + r 75 -7 -4.21194 | opp_overlap 1278325 TATTACATACAAAAA GTGATAACTATGCTAA CGAA TTAGCGCAATTATCAC TTTTAAATCATACAA TERM 1596 1278360 - 1278325 - R 100 -9.2 -5.05601 | opp_overlap 1278325 TATTACATACAAAAA GTGATAACTATGCTAA CGAA TTAGCGCAATTATCAC TTTTAAATCATACAA rpsP 1278798 - 1278385 - | ribosomal protein S16 LCK_01223 1280347 - 1278887 - | hypothetical protein LCK_01224 1280828 - 1280337 - | hypothetical protein LCK_01225 1281043 - 1280855 - | hypothetical protein mscL2 1281294 - 1281674 + | large conductance mechanosensitive channel protein TERM 1597 1281696 - 1281727 + F 93 -7.4 -5.75478 | gap 1, opp_overlap 1281696 CTTTTTGACTTAAAA CCGTCC-GACAAC CGTACTT GTTGTTTGGACGG TTTTTTTGTATAGTT LCK_01227 1281772 - 1282404 + | deoxynucleoside kinase TERM 1598 1282412 - 1282433 + T 95 -8.7 -5.57729 | opp_overlap 1282412 TTCGTTAATAAAAAA CACATGACC AGAT GGCCATGTG TTTTTTATATTATTT TERM 1599 1282433 - 1282412 - T 100 -10.9 -5.4505 | opp_overlap 1282412 TTCGTTAATAAAAAA CACATGACC AGAT GGCCATGTG TTTTTTATATTATTT ruvA 1283033 - 1282443 - | Holliday junction DNA helicase RuvA queA 1284147 - 1283080 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase LCK_01230 1285000 - 1284140 - | phosphoesterase or phosphohydrolase TERM 1600 1284859 - 1284831 - G 76 -4.6 -5.13521 | opp_overlap 1284833 1284835 1284837, overlap 1284833 AAATTACCCAAAAAA TATACAGTGTCT TCATC AGTCACTGTATC ATTCCAAATTTTTTC TERM 1601 1284857 - 1284833 - G 76 -7.2 -4.1821 | opp_overlap 1284833 1284835 1284837, overlap 1284831 ATTACCCAAAAAATA TACAGTGTCT TCATC AGTCACTGTA TCATTCCAAATTTTT ruvB 1286058 - 1285000 - | Holliday junction DNA helicase RuvB LCK_01232 1286632 - 1286096 - | phosphoesterase rdgB 1287240 - 1286638 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 1602 1286779 - 1286766 - GR 71 -3.8 -4.99043 | GGGGTACAAAGAAAA TGGG ATCATA CCCA AAACCGTTATTACCA murI 1288084 - 1287215 - | glutamate racemase LCK_01235 1288174 - 1288893 + | glycine/serine hydroxymethyltransferase TERM 1603 1288938 - 1288894 - T 89 -11.8 -3.29144 | gap 1, opp_overlap 1288904, overlap 1288904 TCACCTTTCTCATAA CAAA-AAAAAAGATGTGCCCC AAAA GTGGCACATCTTTTTTATTTA AATGATTTCAAATTT TERM 1604 1288927 - 1288904 - T 100 -11 -6.41881 | opp_overlap 1288904, overlap 1288894 CATAACAAAAAAAAA GATGTGCCCC AAAA GTGGCACATC TTTTTTATTTAAATG TERM 1605 1288904 - 1288927 + T 100 -11 -5.65927 | opp_overlap 1288904 1288894 CATAACAAAAAAAAA GATGTGCCCC AAAA GTGGCACATC TTTTTTATTTAAATG dltD 1290215 - 1288932 - | D-alanyl transfer protein DltD dltC 1290457 - 1290221 - | Acyl carrier protein dltB 1291694 - 1290486 - | D-alanine export protein LCK_01239 1293219 - 1291687 - | non-ribosomal peptide synthetase module TERM 1606 1293844 - 1293830 - g 73 -7.2 -4.00124 | opp_overlap 1293829 TACCTCACAACCAAA GGTATT ACA AATACC AGTTTGCCCATCTTA LCK_01240 1293527 - 1294744 + | phosphotransferase system cellobiose-specific component IIC LCK_01241 1294734 - 1295564 + | hypothetical protein TERM 1607 1295570 - 1295593 + T 100 -12.6 -4.87665 | opp_overlap 1295570 AAAACAGTAAAAAAA CCTTGATAAC AAGC GTTATCAAGG TTTTTATGCGTCACC TERM 1608 1295593 - 1295570 - T 100 -12.6 -5.69023 | opp_overlap 1295570 AAAACAGTAAAAAAA CCTTGATAAC AAGC GTTATCAAGG TTTTTATGCGTCACC LCK_01242 1296961 - 1295597 - | superfamily II DNA/RNA helicase LCK_01243 1298002 - 1296992 - | exopolyphosphatase-like protein TERM 1609 1297261 - 1297251 - G 74 -4.6 -4.86822 | AACGACACAACAAAA GCCG TTC CAGC GTCACGTAAGTTATA LCK_01244 1299126 - 1298041 - | nucleotidyltransferase/DNA polymerase involved in DNA repair TERM 1610 1299150 - 1299163 + r 71 -6.7 -4.09685 | opp_overlap 1299149 1299150 TATAACATCAACAAG CGAAC ATAA GTTCG TTTTCAGCAGTCAGC TERM 1611 1299221 - 1299188 - R 100 -9.7 -5.67063 | GTCAGCACAAAAAAA TCCCTCTGACC GAAGAGGGCAAT GGTCAGAGGGA AGATAGCTCGCGCTA TERM 1612 1299439 - 1299457 + r 80 -6.6 -4.6902 | opp_overlap 1299440, overlap 1299440 AAATTGTAGTAAAAA AGCACCCG CAA TGGGTGCC TTTTTAGGATTATAC TERM 1613 1299456 - 1299440 - R 100 -9.4 -5.16237 | opp_overlap 1299440 1299439 AATTGTAGTAAAAAA GCACCC GCAAT GGGTGC CTTTTTAGGATTATA TERM 1614 1299440 - 1299456 + r 81 -10.1 -3.40689 | opp_overlap 1299440, overlap 1299439 AATTGTAGTAAAAAA GCACCCG CAA TGGGTGC CTTTTTAGGATTATA TERM 1615 1299472 - 1299484 + r 79 -9.1 -3.39895 | opp_overlap 1299472 CTTTTTAGGATTATA CGTCG CGA CGACG TTCCTTGATACGAGC TERM 1616 1299484 - 1299472 - R 73 -9.1 -2.82516 | opp_overlap 1299472 CTTTTTAGGATTATA CGTCG CGA CGACG TTCCTTGATACGAGC rplS 1299826 - 1299467 - | ribosomal protein L19 pgm3 1301648 - 1299948 - | phosphoglucomutase LCK_01247 1302350 - 1301694 - | DedA family protein TERM 1617 1302298 - 1302288 - G 73 -6.8 -4.19817 | CTTAGTCATTGAAAA CGGA TTA TCCG CTGAAAGAATATCTG TERM 1618 1302407 - 1302380 - R 73 -9.2 -2.78384 | opp_overlap 1302388, overlap 1302388 TTTGCCTCTATTATA CCAAAAAAGCGC CGAG GCGCTTTTCTTG ACGTCTTTACTTTGT TERM 1619 1302388 - 1302399 + r 83 -7.2 -4.6759 | opp_overlap 1302380 1302388 TATTATACCAAAAAA GCGC CGAG GCGC TTTTCTTGACGTCTT TERM 1620 1302399 - 1302388 - R 89 -7.2 -5.23316 | opp_overlap 1302388, overlap 1302380 TATTATACCAAAAAA GCGC CGAG GCGC TTTTCTTGACGTCTT LCK_01248 1303865 - 1302414 - | sucrose phosphorylase LCK_01249 1305156 - 1303957 - | putative permease TERM 1621 1305405 - 1305423 + r 100 -10.4 -4.17425 | opp_overlap 1305405 AATTTAACAAAAAAA GCAAATTC TAA GAATTTGC TTTTACGCTGGTTGT TERM 1622 1305423 - 1305405 - R 100 -10.4 -5.83226 | opp_overlap 1305405 AATTTAACAAAAAAA GCAAATTC TAA GAATTTGC TTTTACGCTGGTTGT trxB2 1306380 - 1305412 - | thioredoxin-disulfide reductase TERM 1623 1305690 - 1305676 - G 71 -6.4 -4.21343 | GCCAACATATATAAA GATACC GCT GGCATC AATGTGCGACACTTC galU 1307352 - 1306480 - | UTP-glucose-1-phosphate uridylyltransferase gpdA 1308404 - 1307388 - | glycerol-3-phosphate dehydrogenase TERM 1624 1308247 - 1308228 - G 71 -7.2 -3.80841 | gap 1, opp_overlap 1308232, overlap 1308217 1308231 ATCATCAGTAGCAAA CAACTGCTC TGA GAGC-GTTG CATCTGGTAAATATT hprK 1309359 - 1308397 - | HPr serine kinase/phosphatase LCK_01254 1309717 - 1309364 - | hypothetical protein TERM 1625 1309851 - 1309829 - R 93 -7.1 -5.72622 | opp_overlap 1309829 CTGATAAACAAAAAA TGACTAAAC TTAGC GTTCAGTCA TTCATCTCATAAAAT phoU 1310548 - 1309871 - | phosphate uptake regulator pstB1 1311348 - 1310578 - | phosphate ABC transporter ATP-binding protein pstB2 1312184 - 1311345 - | phosphate ABC transporter ATP-binding protein pstA 1313149 - 1312265 - | phosphate ABC transporter permease LCK_01259 1314072 - 1313149 - | ABC-type phosphate transport system, permease component TERM 1626 1313816 - 1313803 - G 70 -3.1 -4.90013 | overlap 1313804 TAAGGTAACCAAAAA CGATC CCAA GATCA TTGGCAACGCCCCAA pstE 1315043 - 1314162 - | phosphate ABC transporter substrate-binding protein hpk5 1316499 - 1315141 - | histidine protein kinase; sensor protein TERM 1627 1316534 - 1316549 + r 100 -10.4 -4.40298 | opp_overlap 1316534 TATCATAACAAAAAA GCTCGC TATC GCGAGC TTTGTTAATTTGAGT TERM 1628 1316549 - 1316534 - R 100 -10.4 -5.58179 | opp_overlap 1316534 TATCATAACAAAAAA GCTCGC TATC GCGAGC TTTGTTAATTTGAGT LCK_01262 1317479 - 1316568 - | phosphate-binding protein rrp5 1318352 - 1317663 - | response regulator TERM 1629 1318421 - 1318450 + r 100 -12.3 -3.91488 | opp_overlap 1318426, overlap 1318426 TGCATTGTAACAAAA AAAAAGGAAACGC CCTA GCGTTTCCTTTTA TTCTTTACAGGAATT TERM 1630 1318426 - 1318445 + r 100 -12.2 -5.00196 | opp_overlap 1318426, overlap 1318421 TGTAACAAAAAAAAA GGAAACGC CCTA GCGTTTCC TTTTATTCTTTACAG TERM 1631 1318445 - 1318426 - R 100 -12.2 -6.36459 | opp_overlap 1318426 1318421 TGTAACAAAAAAAAA GGAAACGC CCTA GCGTTTCC TTTTATTCTTTACAG recA 1319609 - 1318464 - | hypothetical protein TERM 1632 1319674 - 1319695 + r 83 -10.3 -3.158 | opp_overlap 1319674 1319678, overlap 1319678 GTAAAAGCAAGCAAA TAAACGAAC AATT GTTCGTTTA TGTTCCCCTTTATTT TERM 1633 1319695 - 1319674 - R 93 -10.3 -4.07675 | opp_overlap 1319674 1319678, overlap 1319678 GTAAAAGCAAGCAAA TAAACGAAC AATT GTTCGTTTA TGTTCCCCTTTATTT TERM 1634 1319678 - 1319691 + r 71 -6.7 -4.22041 | opp_overlap 1319674 1319678, overlap 1319674 AAGCAAGCAAATAAA CGAAC AATT GTTCG TTTATGTTCCCCTTT TERM 1635 1319691 - 1319678 - R 76 -6.7 -4.59212 | opp_overlap 1319678 1319674, overlap 1319674 AAGCAAGCAAATAAA CGAAC AATT GTTCG TTTATGTTCCCCTTT TERM 1636 1319726 - 1319738 + r 80 -9.1 -3.65902 | opp_overlap 1319726 TATTAGACGAAAAAA GCGCT ATT AGCGC TTTACATACCATCAG TERM 1637 1319738 - 1319726 - R 100 -9.1 -5.23316 | opp_overlap 1319726 TATTAGACGAAAAAA GCGCT ATT AGCGC TTTACATACCATCAG pgsA 1320321 - 1319740 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase LCK_01266 1321204 - 1320332 - | putative transcriptional regulator TERM 1638 1320654 - 1320668 + g 100 -9.2 -5.79588 | opp_overlap 1320653 GTTCCTAAATTCAAG GCTGGC TTA GCCGGC TTTTTTTCCTTTTGA LCK_01267 1322490 - 1321219 - | Zn-dependent peptidase TERM 1639 1321947 - 1321961 + g 79 -3.6 -5.47159 | overlap 1321948 ATAACAATTGCGGTG TGATTT TTG AAATCG TTTTTTGTGTTCCCG LCK_01268 1323722 - 1322487 - | Zn-dependent peptidase TERM 1640 1322708 - 1322720 + g 73 -7.7 -3.94853 | TCGTTTTAATGGCTT CGAGA ATT TCTCG TTTGATATTCCCTTG cls 1325215 - 1323761 - | phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase TERM 1641 1323833 - 1323849 + g 77 -9.5 -3.4759 | opp_overlap 1323831 1323835, overlap 1323841 CTGTTCCTCATAATC CACAGTT GTT AACTGTG TTGATTGTGATACAT TERM 1642 1325088 - 1325062 - G 86 -2.2 -6.02345 | overlap 1325066 1325069 1325078 CAACTAGAAAAAAAA TAAAGAAGCCAA CAA CCGGCATCGTTA TTAACACTAATAACC TERM 1643 1325084 - 1325066 - G 78 -3 -5.39407 | overlap 1325062 1325069 1325078 TAGAAAAAAAATAAA GAAGCCAA CAA CCGGCATC GTTATTAACACTAAT TERM 1644 1325303 - 1325335 + r 81 -9.4 -3.8125 | opp_overlap 1325308, overlap 1325308 GTTATTTTCTAAAGA AAAAATCAAAGCTA TTGTT TAGCTTTGATTTTG TGTTTTAATTAGCAA TERM 1645 1325308 - 1325330 + r 100 -9.3 -4.93333 | opp_overlap 1325308, overlap 1325303 TTTCTAAAGAAAAAA TCAAAGCTA TTGTT TAGCTTTGA TTTTGTGTTTTAATT TERM 1646 1325330 - 1325308 - R 100 -9.3 -5.63517 | opp_overlap 1325303 1325308 TTTCTAAAGAAAAAA TCAAAGCTA TTGTT TAGCTTTGA TTTTGTGTTTTAATT LCK_01270 1326191 - 1325340 - | amino acid ABC transporter periplasmic protein LCK_01271 1326829 - 1326191 - | ABC-type polar amino acid transport system, ATPase component LCK_01272 1327474 - 1326833 - | ABC-type amino acid transport system, permease component TERM 1647 1327422 - 1327412 - G 76 -3.2 -5.25803 | AATTGTTAGAAAAAA CACC CCC AGTG TCATTTTCAAGCCTG TERM 1648 1327548 - 1327521 - R 100 -15 -5.24989 | TTATATATTAAAAAA GCCCTCTTGCAA AATA TTGCAAGAGGAC GCTCGAGCGTGGTGC TERM 1649 1327664 - 1327621 - R 100 -19 -2.62184 | opp_overlap 1327663, overlap 1327628 GTCTTTGTCATAGTA GCAAAAACGCCCTCCGAGTA TCAC TACTCAGAGGGCGTTACCGC GGTGCCACCTCTTAA TERM 1650 1327657 - 1327628 - R 100 -18.7 -4.79223 | overlap 1327621 TCATAGTAGCAAAAA CGCCCTCCGAGTA TCAC TACTCAGAGGGCG TTACCGCGGTGCCAC mreD 1328441 - 1327914 - | cell shape-determining protein TERM 1651 1328347 - 1328332 - G 86 -9 -4.42639 | ACATGCCAAGGAAAA GCGGTA AAAA TACCGC CCATACCAGCCATCA mreC 1329298 - 1328441 - | rod shape-determining protein MreC TERM 1652 1329347 - 1329327 - R 100 -10.4 -5.26119 | opp_overlap 1329327 1329324 TTTTCAAAAATAAAA GCGTAGCG CCAGC CGCCACGC TAATGTTAATTCTTT mreB2 1330384 - 1329377 - | Actin-like ATPase involved in cell morphogenesis LCK_01276 1330648 - 1330475 - | hypothetical protein TERM 1653 1330685 - 1330711 + H 100 -9.6 -4.43911 | overlap 1330686 TACAACATTTTCTTT TTAGCACTCT AAAGAAA AGAGTGCTAA TTTTAATTGCAATTT TERM 1654 1330772 - 1330782 + G 72 -3.2 -5.03314 | TAAGAAAGGAAAATG TGTG CAT CACG TTTTTTCAGGATCAC TERM 1655 1331135 - 1331149 + G 73 -10 -2.82895 | overlap 1331134 ACGGCCGTTGTTGAA GGCTTG GCC CAAGCC ATTGTTGCTAACAAA TERM 1656 1332789 - 1332812 + G 71 -9.7 -2.80796 | overlap 1332788 1332791 ACTACTTGGCACATC CAGCAAGTA CCGTAT TACTTGCTG ATTTAGATGATGCCA clpE 1330769 - 1332874 + | ATPases with chaperone activity, ATP-binding subunit TERM 1657 1332922 - 1332881 - T 70 -2.3 -5.25772 | gap 1, opp_overlap 1332881 AAAGCATAAGAAAAA CACGATT-CTTAGCGACTCA TGA TTAGTCGTTGCGGAATCGTG TTTTTTACAATTTGT TERM 1658 1332881 - 1332922 + T 95 -8.9 -5.1361 | gap 1, opp_overlap 1332881 AAAGCATAAGAAAAA CACGATTCT-TAGCGACTCA TGA TTAGTCGTTGCGGAATCGTG TTTTTTACAATTTGT LCK_01278 1333448 - 1332927 - | cell wall-associated hydrolase (invasion-associated protein) purA 1334761 - 1333478 - | adenylosuccinate synthetase TERM 1659 1334239 - 1334261 + g 73 -5.7 -4.58395 | TCAGTGCTTCTTCAT TGTACAATT TGGTC AATTGTGCA TTTTTAAACGGTAAG LCK_01280 1336573 - 1335008 - | integral membrane protein LCK_01281 1336965 - 1336588 - | 6-pyruvoyl-tetrahydropterin synthase LCK_01282 1338308 - 1336968 - | cell wall biosynthesis glycosyltransferase TERM 1660 1338167 - 1338180 + g 93 -6.7 -5.38348 | ATTTCAATGGTTCTT GCATC ACTT GATGC TTTTTTGATGTTTTT LCK_01283 1338896 - 1338312 - | major facilitator superfamily permease LCK_01284 1339632 - 1338889 - | extracellular protein TERM 1661 1339813 - 1339786 - R 91 -4.2 -5.89921 | opp_overlap 1339787, overlap 1339787 AGCACAACAAAAAAA GGTAACACCATC CGCT GATAATGTTACT CTCCTTTGTCGAATC TERM 1662 1339812 - 1339787 - R 78 -7.7 -4.11512 | opp_overlap 1339787, overlap 1339786 GCACAACAAAAAAAG GTAACACCATC CGCT GATAATGTTAC TCTCCTTTGTCGAAT LCK_01285 1346008 - 1339835 - | alternansucrase TERM 1663 1346207 - 1346177 - R 100 -12.8 -5.4182 | opp_overlap 1346177 AATTACAAATAAAAA TAGCTAAGAGAAGA ACA TATTCTCTTAGCTA TTTTTTAAAAATTCA TERM 1664 1346177 - 1346207 + r 100 -12.8 -5.055 | opp_overlap 1346177 AATTACAAATAAAAA TAGCTAAGAGAAGA ACA TATTCTCTTAGCTA TTTTTTAAAAATTCA hisC 1347276 - 1346212 - | histidinol-phosphate aminotransferase TERM 1665 1347355 - 1347342 - R 93 -8.1 -5.71983 | opp_overlap 1347338 1347342 TTAACCACAAAAAAA CACGC ACCA GCGTG TTAAATTTTTTCTAG TERM 1666 1347342 - 1347355 + r 73 -8.1 -3.55457 | opp_overlap 1347342, overlap 1347338 TTAACCACAAAAAAA CACGC ACCA GCGTG TTAAATTTTTTCTAG LCK_01288 1348159 - 1347356 - | HAD superfamily hydrolase LCK_01289 1348391 - 1348212 - | hypothetical protein ffh 1349866 - 1348391 - | Signal recognition particle protein TERM 1667 1349471 - 1349487 + g 76 -4.3 -5.04601 | CGCAATGAGTAATGG GCGCGCA TGC TGTTCGC TTTTTAATTTGTAGG TERM 1668 1349876 - 1349901 + r 70 -7 -3.83102 | opp_overlap 1349880 AGCCATAATATTTAC TATACAACTC GTTAAA GAGTTGTGTA TTTCCTCCTGATTTA ylxM 1350281 - 1349937 - | putative helix-turn-helix protein, YlxM/p13-like protein TERM 1669 1350130 - 1350147 + g 72 -9.9 -2.97017 | opp_overlap 1350128, overlap 1350126 ATATTATCAGAGACG GCTTGTC GACT GACAAGC TCTGCTTCTGCAATT ftsY 1351480 - 1350278 - | Signal recognition particle-docking protein FtsY TERM 1670 1350693 - 1350703 + g 76 -2.4 -5.45802 | opp_overlap 1350675 1350693 TCAAACACTACCGAA GCTG GAT CTGC TTTTTCTTTTCCAGC LCK_01293 1355040 - 1351486 - | Barmotin TERM 1671 1353981 - 1353996 + g 74 -4 -5.15526 | gap 1, overlap 1353983 GCGTTTTTAATTCAT CTG-CAG CGA CTGTCAG TTTTTGCTTTTCTAT TERM 1672 1355031 - 1355046 + g 79 -4.8 -5.08601 | TGATTTCGAGTGATT TAAGTT TCAT AACTTA TTTTTCTTCCAATAA rncS 1355745 - 1355044 - | dsRNA-specific ribonuclease LCK_01295 1357198 - 1355831 - | phosphomannomutase ybbR 1358287 - 1357217 - | YbbR protein TERM 1673 1357661 - 1357685 + gr 76 -7.1 -4.15565 | AACAAGCCGTGTACT TTGCGTCACAG TGT CTTTGACGCCA TTTTGCAATGGTACC LCK_01297 1359075 - 1358260 - | hypothetical protein TERM 1674 1358446 - 1358430 - GR 85 -9.5 -3.92996 | CTTCAGACACAACAA CAGTGAT AGC ATCACTG GCCTCGGATATACCT LCK_01298 1361222 - 1359126 - | Na+:H+ antiporter TERM 1675 1360278 - 1360268 - G 70 -8.2 -3.74658 | overlap 1360259 AAATAATTACCCAAA CGGC AAT GCCG TAAAAAATGGCACGT murB 1362104 - 1361226 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1676 1362211 - 1362177 - R 87 -6.7 -5.5074 | gap 1 GAATGCAACAAAAAA GCTTGAAATTAGAC CCATTTTC GTCTA-TTTCAAGC TACATATTTAAGCAA ndk 1362632 - 1362219 - | nucleoside diphosphate kinase LCK_01301 1363204 - 1362701 - | hypothetical protein hexB 1365251 - 1363245 - | DNA mismatch repair ATPase TERM 1677 1364510 - 1364524 + g 79 -10 -3.47322 | opp_overlap 1364499 1364509 1364508 1364506 ATACCGTCAAATATT CACGTG AAC CACGTG TTAATTCTGGTAGGG mutS2 1367877 - 1365280 - | DNA mismatch repair protein MutS TERM 1678 1367031 - 1367043 + g 87 -4.8 -5.5112 | GATCAATGAGCCCAA GCAG CGAAC CTGC TTTTTTCTTGGTACG recG 1369949 - 1367919 - | ATP-dependent DNA helicase RecG TERM 1679 1368610 - 1368626 + g 74 -3.7 -5.06016 | overlap 1368611 AGTGCTGTATCTAAC TGATTGT GAC GCAATCG TTTTGTTTGTATGGT TERM 1680 1369413 - 1369451 + g 72 -8.9 -3.40611 | opp_overlap 1369414, overlap 1369405 1369411 1369414 ATTGCGATCCAATAA ACGATACTTTTGTCGGA TAGTT TCCGGCACAAGTGTCGG TATTGTTCCCCTGAC TERM 1681 1369414 - 1369450 + g 83 -12.4 -2.64045 | opp_overlap 1369414, overlap 1369405 1369413 1369411 TTGCGATCCAATAAA CGATACTTTTGTCGGA TAGTT TCCGGCACAAGTGTCG GTATTGTTCCCCTGA TERM 1682 1369450 - 1369414 - G 77 -8 -4.20516 | opp_overlap 1369405 1369413 1369411 1369414 TTGCGATCCAATAAA CGATACTTTTGTCGGA TAGTT TCCGGCACAAGTGTCG GTATTGTTCCCCTGA TERM 1683 1369516 - 1369560 + g 80 -11 -3.43187 | gap 2, opp_overlap 1369515, overlap 1369495 1369507 GTTTTAGCAGCAATT TGCTT-GGTTGCTGGG-TAGAT AGG ATCTAGCCCATCGACCGAAGCA TTAATCATTTTTATG TERM 1684 1370002 - 1369980 - R 90 -8.4 -5.15969 | TTTTAACTCAAAAAA CGGCGACC AAGATAA GGTCACCG CTTAGGCTTTTAATA gabD 1371447 - 1370041 - | NAD-dependent aldehyde dehydrogenase TERM 1685 1370494 - 1370512 + g 71 -3.9 -5.00388 | AGCTTCAACAGCTGC TTTGACT TGCTT GGTCAAA TTTGTTTTTGCTTTC LCK_01306 1372306 - 1371677 - | major facilitator superfamily permease TERM 1686 1372391 - 1372365 - R 100 -11.6 -5.40004 | opp_overlap 1372365 GATGAAATGAAAAAA GCGCCTTGCCAA TTT TTGACAACGCGC TTTTTCATTACTTTT TERM 1687 1372365 - 1372391 + r 100 -9.4 -4.97312 | opp_overlap 1372365 GATGAAATGAAAAAA GCGCCTTGCCAA TTT TTGACAACGCGC TTTTTCATTACTTTT LCK_01307 1372636 - 1372418 - | hypothetical protein TERM 1688 1373480 - 1373470 - g 71 -4 -4.87328 | opp_overlap 1373475 TACAGAAACACAAAA TGAT GCC ATCA AGAATGGTTTCGAAC LCK_01308 1372838 - 1373512 + | lipoprotein TERM 1689 1373570 - 1373537 - T 100 -9.1 -5.46129 | opp_overlap 1373537 TAACAAATTAAAAAA GCGATATTTACAA TTTCATCC CTGTAAATATCGC TTTTTTCAGTGTTTA TERM 1690 1373537 - 1373570 + T 90 -8.4 -5.18561 | opp_overlap 1373537 TAACAAATTAAAAAA GCGATATTTACA ATTTCATCCC TGTAAATATCGC TTTTTTCAGTGTTTA TERM 1691 1374063 - 1374015 - T 100 -21.5 -3.73953 | opp_overlap 1374015 ATTACGCTTACGAAA TTAATCAATTTAGCGCGCCAT GTTTTCA ATAGCGCGCTAAATTGATTAA TTTTTGCTTATGACA TERM 1692 1374015 - 1374063 + T 100 -19.3 -4.93365 | opp_overlap 1374015 ATTACGCTTACGAAA TTAATCAATTTAGCGCGCCAT GTTTTCA ATAGCGCGCTAAATTGATTAA TTTTTGCTTATGACA LCK_01309 1374335 - 1374159 - | hypothetical protein TERM 1693 1374402 - 1374415 + H 70 -2.3 -5.2166 | TCCGTTAGTTTAGTC GCTCA GGGA TGTGC TTTTTTGCCTTCTTA TERM 1694 1375038 - 1375011 - g 100 -4.3 -6.09196 | gap 1, opp_overlap 1375011 1375022 CGCAAAATAAAAAAA CTAACTCAGACT TCACT AG-CTGAATTAG TTAACTCTTCACGTT LCK_01310 1374963 - 1375331 + | Cro/CI family transcriptional regulator TERM 1695 1375674 - 1375660 - f 77 -10 -3.10908 | overlap 1375663 AAATTGACTAGCTAA GCACTC ACA GAGTGC GTACATACGTGCATT LCK_01311 1375727 - 1376086 + | ribonuclease G or E TERM 1696 1376106 - 1376092 - f 100 -10 -5.52384 | overlap 1376095 TTCTTATTAAAAAAA GCACTC ACG GAGTGC GTACATACTTGCCAA LCK_01312 1376570 - 1376980 + | group-specific protein TERM 1697 1377033 - 1377005 - T 79 -4.5 -5.24647 | opp_overlap 1377006, overlap 1377000 1377006 ATATACAAAATAAAA CCACGCGCTAGTT TTA ATCTAGGGCATGA CTTTTTTATTAACTC TERM 1698 1377658 - 1377625 - T 100 -9.7 -5.55769 | overlap 1377601 TTTCATAACAAAAAA CGATACATCAAGTTT TTTC AAACTAGATGCACCG CTCTGCAATATAATA TERM 1699 1377861 - 1377824 - T 93 -8.7 -4.67168 | opp_overlap 1377824, overlap 1377828 AAAAAGCGTCAAAAA TAAACGGCCAACATT TGACAAAC AATGTTAACCGTTTA TTTAGCAAAAGCTAT TERM 1700 1377857 - 1377828 - T 75 -5.1 -4.86385 | opp_overlap 1377824, overlap 1377824 AGCGTCAAAAATAAA CGGCCAACATT TGACAAAC AATGTTAACCG TTTATTTAGCAAAAG LCK_01313 1378092 - 1377883 - | hypothetical protein TERM 1701 1378366 - 1378378 + G 74 -4.9 -4.78149 | opp_overlap 1378366 1378364 GGAAAAGGGAAAATA TAATG CCT CATTA TTTTTAGCTTATGAC LCK_01314 1378253 - 1378483 + | transcriptional regulator TERM 1702 1378778 - 1378788 + F 76 -4 -5.33848 | CAACGTGCTGATGCC TTGA GTC TCAA TTTTTTACTTCTACT TERM 1703 1379720 - 1379733 + G 70 -3.1 -4.96646 | opp_overlap 1379715 CATTACAGAAGACCA TGTCG GCCA CGATA TTTTTACTTATGTGA ysdB 1378941 - 1379834 + | ABC transporter ATP-binding protein ysdA 1379827 - 1381056 + | ABC-type Na+ efflux pump, permease component LCK_01317 1381073 - 1381543 + | endoglucanase TERM 1704 1381590 - 1381537 - T 100 -26 -3.30605 | opp_overlap 1381551, overlap 1381551 AGACCAACAATTGAA TCAATAATAAAAAAGCAATGCTGT AATTAA ACAGCATTGCTTTTTTATTATTGA TACCAACTATCAGCT TERM 1705 1381576 - 1381551 - T 100 -12 -5.66229 | opp_overlap 1381551, overlap 1381537 ATCAATAATAAAAAA GCAATGCTGT AATTAA ACAGCATTGC TTTTTTATTATTGAT TERM 1706 1381551 - 1381576 + T 100 -12 -5.66229 | opp_overlap 1381551 1381537 ATCAATAATAAAAAA GCAATGCTGT AATTAA ACAGCATTGC TTTTTTATTATTGAT busAB 1383290 - 1381584 - | ABC-type proline/glycine betaine transport system, permease component TERM 1707 1381843 - 1381872 + g 76 -7.2 -4.23298 | opp_overlap 1381846, overlap 1381846 TATTTACTAAACATC CAATGTGGTGAC CAACCT GTTACCACAATG TCTTTTTTAGCTTTA busAA 1384476 - 1383283 - | ABC-type proline/glycine betaine transport system, ATPase component TERM 1708 1384025 - 1384038 + g 74 -5.3 -4.69464 | AAGCTTAATAGCTTA GCATT ATCC AATGC TTTTTCCGCTCTTTT TERM 1709 1384499 - 1384517 + H 74 -3.2 -5.28481 | opp_overlap 1384499 TCCACTTTGTTCAAA TAGCAT GATGACA ATGCTA TTTTTTCATTGACTC LCK_01320 1384661 - 1385284 + | transcriptional regulator TERM 1710 1385301 - 1385288 - f 74 -5.3 -4.65838 | opp_overlap 1385288 GATACACCTTAAAAA GCTAT TAAA ATAGC TTTTTTTATTTTCTT TERM 1711 1385288 - 1385301 + F 95 -5.3 -6.17669 | opp_overlap 1385288 GATACACCTTAAAAA GCTAT TAAA ATAGC TTTTTTTATTTTCTT LCK_01321 1385376 - 1385921 + | putative biotin biosynthesis protein TERM 1712 1386209 - 1386243 + T 100 -11.6 -5.38249 | opp_overlap 1386209 ACCAAGCATAAAAAA GCAATGATCCGTCTAT TTG ATAGAAAGATCATTGC TTTTTTATGCTTGGT TERM 1713 1386243 - 1386209 - T 100 -13.8 -5.38249 | opp_overlap 1386209 ACCAAGCATAAAAAA GCAATGATCCGTCTAT TTG ATAGAAAGATCATTGC TTTTTTATGCTTGGT folD 1387096 - 1386248 - | 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase TERM 1714 1386319 - 1386333 + g 79 -11.4 -2.64616 | opp_overlap 1386318 TCATTGGTCCAACAC CGCCAG GCA CTGGCG TGATGTAGCTGGCAA comEB 1387170 - 1387655 + | deoxycytidylate deaminase TERM 1715 1387930 - 1387912 - f 82 -9.6 -3.60865 | overlap 1387913 1387928 CACGCGAAAGGATAA CCGTGTTC TAT GAACACGA CATAATATAATCATG TERM 1716 1387929 - 1387913 - f 81 -10.9 -2.76037 | overlap 1387912 1387928 ACGCGAAAGGATAAC CGTGTTC TAT GAACACG ACATAATATAATCAT thyA 1387943 - 1388902 + | thymidylate synthase LCK_01325 1388939 - 1389439 + | acetyltransferase TERM 1717 1389429 - 1389482 + T 100 -13.7 -3.8211 | gap 1, opp_overlap 1389444, overlap 1389444 TAGCCCATGAATTTA TTGC-AAATTAAAAAAGTTGTCACTT TGA AAGTGACAACTTTTTTAGTTAAGTAA TTCTTCTAAATCCAA TERM 1718 1389466 - 1389444 - T 100 -13.6 -5.37593 | opp_overlap 1389444 1389429 TTGCAAATTAAAAAA GTTGTCACTT TGA AAGTGACAAC TTTTTTAGTTAAGTA TERM 1719 1389444 - 1389466 + T 100 -13.6 -5.28481 | opp_overlap 1389444, overlap 1389429 TTGCAAATTAAAAAA GTTGTCACTT TGA AAGTGACAAC TTTTTTAGTTAAGTA LCK_01326 1390448 - 1389471 - | glycosyltransferase TERM 1720 1390106 - 1390096 - G 81 -6.8 -4.67982 | TGTGAGTTAACAAAA CCAG CTT CTGG ATGCGATTCTGAAAA LCK_01327 1391600 - 1390542 - | racemase domain-containing protein TERM 1721 1391248 - 1391230 - G 76 -4.7 -5.02074 | CTACCTGTGAAAAAA TTAAGAA TATAT TTCTTAA ACAACGACCATACCA LCK_01328 1393320 - 1391593 - | cytochrome b subunit of the bc complex tagZ 1396865 - 1393317 - | teichoic acid biosynthesis protein TERM 1722 1393745 - 1393756 + g 78 -3 -5.37345 | TAATCATGTAAAGCT CTTT ATCT AAAG TTTTTTCTAATTGCA TERM 1723 1394456 - 1394466 + g 81 -6.8 -4.70583 | TATCTCTAAAGCCTT CACG GTT CGTG TTTTGTCTTAATACA TERM 1724 1394534 - 1394545 + g 72 -4.4 -4.68384 | ACCACTCTAACTGTC CCAT TGGT ATGG TTTTATTCAGTAACT TERM 1725 1394610 - 1394588 - G 71 -9.9 -2.76162 | overlap 1394587 TACCCCATCGCAAAG GCATCGTGA AATCA TCACGACGC AAGAAATGTATAGAA TERM 1726 1394694 - 1394720 + g 76 -4.4 -5.0133 | opp_overlap 1394694 CGATACTTCCCACAA TTGGCGCTTG CCAAAAC CATGCGTCAA TTTTTTGGCACGATA TERM 1727 1396786 - 1396801 + g 82 -4 -5.42259 | overlap 1396784 ACAACGCTTAGCTTT GTTGTT GCCC GACAAC TTTTTTTAACAATGG tagG 1397758 - 1396943 - | ABC-type polysaccharide/polyol phosphate export system, permease component tagH 1398863 - 1397766 - | teichoic acids export ATP-binding protein tagH TERM 1728 1397869 - 1397881 + g 100 -6.3 -6.14618 | opp_overlap 1397869 CGGCCACCAACAGCA TTGTC TCT GACAA TTTTTTTCTTTTCTG TERM 1729 1399006 - 1398991 - R 86 -2.5 -5.86465 | AACAACATAAAAAAA GCACC TAAACC AGTGC TTTTAAAACTTAAAT LCK_01332 1399603 - 1399016 - | anaerobic NTP reductase or activator protein TERM 1730 1399568 - 1399583 + g 72 -4.7 -4.76171 | CCATTCTTGACTATC CGGTA CAGTAA TACCG TTTTCTAATTTTTTA nrdD 1401728 - 1399596 - | oxygen-sensitive ribonucleoside-triphosphate reductase TERM 1731 1401509 - 1401496 - G 75 -8.1 -4.07568 | TGTTCTTGCTCAAAA GCTGC GGCT GCAGC ACCATCCAATTTTTT TERM 1732 1401840 - 1401861 + r 74 -6.7 -4.35747 | opp_overlap 1401844, overlap 1401844 CACTTGTTCTATGTA TAAACATTC ATGC GAATGTTTG TTTCATTTATTTTTA TERM 1733 1401844 - 1401857 + r 74 -5.3 -4.66537 | opp_overlap 1401844, overlap 1401840 TGTTCTATGTATAAA CATTC ATGC GAATG TTTGTTTCATTTATT TERM 1734 1402050 - 1402063 + r 83 -6.7 -4.89009 | opp_overlap 1402050 TTGTTCACAAAAAAA GCACA ATAA TGTGC TTTTTACTTACCTAT TERM 1735 1402063 - 1402050 - R 89 -6.7 -5.60993 | opp_overlap 1402050 TTGTTCACAAAAAAA GCACA ATAA TGTGC TTTTTACTTACCTAT als 1403769 - 1402084 - | acetolactate synthase TERM 1736 1403979 - 1403959 - R 86 -6.1 -5.5604 | opp_overlap 1403959 1403978 TTAAGCAATAAAAAA CAGTCAGTA GTA CACTGGCTG TTTTAAAACATTAAT TERM 1737 1403959 - 1403979 + r 78 -7.6 -4.11751 | opp_overlap 1403959, overlap 1403978 TTAAGCAATAAAAAA CAGTCAGT AGTAC ACTGGCTG TTTTAAAACATTAAT LCK_01335 1405390 - 1403990 - | GTPase TERM 1738 1404952 - 1404928 - G 70 -7.7 -3.71672 | opp_overlap 1404928 1404929, overlap 1404924 1404929 GTGTAGCAAAATGAA TGTTGCCGCGG CCA CCACGGCCACC TTTTACGACAACTAA TERM 1739 1404951 - 1404929 - G 80 -11.2 -2.82521 | opp_overlap 1404928 1404929, overlap 1404928 1404924 TGTAGCAAAATGAAT GTTGCCGCGG CCA CCACGGCCAC CTTTTACGACAACTA TERM 1740 1405029 - 1405042 + g 73 -8.1 -3.89212 | ACATCTTTTACCGTT GTGCC TTGT GGCAC TTTGATATATCGATC uvrC 1407190 - 1405466 - | excinuclease ABC subunit C TERM 1741 1407323 - 1407310 - R 93 -8.1 -5.45802 | GTTCGAAAATAAAAA CACGC GTTC GCGTG TTCAAAAATAAATTT pyrG 1408956 - 1407337 - | CTP synthase TERM 1742 1408261 - 1408276 + g 75 -2.6 -5.20154 | AGGGTCGACATCTGT GAAAGT TGAA ATTTTC TTTTTTAAGTTATCT TERM 1743 1409054 - 1409017 - R 100 -12.3 -5.61881 | gap 1, opp_overlap 1409024, overlap 1409019 1409024 GGGTAAAAATAAAAA TAGAAAAGCTCCCAAGTA TAA TACTTGGGAGCTTTTA-A CGTCTGTCCCATTTA TERM 1744 1409053 - 1409019 - R 100 -17.4 -4.43511 | opp_overlap 1409024, overlap 1409017 1409024 GTAAAAATAAAAATA GAAAAGCTCCCAAGTA TAA TACTTGGGAGCTTTTA ACGTCTGTCCCATTT TERM 1745 1409048 - 1409024 - R 100 -17.3 -5.0432 | opp_overlap 1409024, overlap 1409019 1409017 AATAAAAATAGAAAA GCTCCCAAGTA TAA TACTTGGGAGC TTTTAACGTCTGTCC TERM 1746 1409024 - 1409048 + r 100 -17.3 -4.18401 | opp_overlap 1409024 1409019 1409017 AATAAAAATAGAAAA GCTCCCAAGTA TAA TACTTGGGAGC TTTTAACGTCTGTCC rumA3 1410578 - 1409157 - | 23S rRNA (uracil-5-)-methyltransferase RumA TERM 1747 1410660 - 1410644 - R 70 -8 -3.15292 | ACAAACATTATTTAA CGTCGA GTTTT TCGACG TCAGCCATAAATTGC LCK_01339 1411625 - 1410636 - | sphingosine kinase TERM 1748 1411711 - 1411726 + r 71 -7.6 -3.53722 | opp_overlap 1411713 TAAAACTTATGTACA CAGGTA AGTT TACCTG TTATGTGACTATCCA gatB 1413187 - 1411748 - | glutamyl-tRNA(Gln) amidotransferase, B subunit gatA 1414674 - 1413205 - | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 1749 1414062 - 1414047 - G 70 -9 -3.16564 | GCCCCACTTGATCAA GCGATG AAGC CATCGC AAACAACCCCCAACG gatC 1414982 - 1414674 - | glutamyl-tRNA(Gln) amidotransferase, C subunit rpsO 1415213 - 1415482 + | ribosomal protein S15 rpsT 1415534 - 1415785 + | ribosomal protein S20 TERM 1750 1415839 - 1415782 - T 87 -10.4 -3.71794 | gap 1, opp_overlap 1415784 1415786 1415788 1415801, overlap 1415786 1415801 AGCTAAGTATGTAAA GTAATTCATAGTAAAAAAAGACTTGGA CATGT TCCAAGTCTTTTTTTACTATATAT-AT TGTAAAATAAATCTT TERM 1751 1415784 - 1415838 + T 93 -13.3 -3.33671 | opp_overlap 1415782 1415786 1415801, overlap 1415786 1415788 1415801 CTAAGTATGTAAAGT AATTCATAGTAAAAAAAGACTTGGA CATGT TCCAAGTCTTTTTTTACTATATATA TTGTAAAATAAATCT TERM 1752 1415786 - 1415836 + T 100 -15.9 -3.23572 | opp_overlap 1415782 1415786 1415801, overlap 1415784 1415788 1415801 AAGTATGTAAAGTAA TTCATAGTAAAAAAAGACTTGGA CATGT TCCAAGTCTTTTTTTACTATATA TATTGTAAAATAAAT TERM 1753 1415836 - 1415786 - T 100 -18.1 -3.55524 | opp_overlap 1415786 1415784 1415788 1415801, overlap 1415782 1415801 AAGTATGTAAAGTAA TTCATAGTAAAAAAAGACTTGGA CATGT TCCAAGTCTTTTTTTACTATATA TATTGTAAAATAAAT TERM 1754 1415788 - 1415834 + T 100 -18.5 -3.18118 | opp_overlap 1415786 1415782 1415801, overlap 1415786 1415784 1415801 GTATGTAAAGTAATT CATAGTAAAAAAAGACTTGGA CATGT TCCAAGTCTTTTTTTACTATA TATATTGTAAAATAA TERM 1755 1415801 - 1415821 + T 100 -9.8 -5.60864 | opp_overlap 1415786 1415782 1415801, overlap 1415788 1415786 1415784 TTCATAGTAAAAAAA GACTTGGA CATGT TCCAAGTC TTTTTTTACTATATA TERM 1756 1415821 - 1415801 - T 100 -9.8 -5.58454 | opp_overlap 1415801 1415788 1415786 1415784, overlap 1415786 1415782 TTCATAGTAAAAAAA GACTTGGA CATGT TCCAAGTC TTTTTTTACTATATA holA 1416831 - 1415830 - | DNA polymerase III, delta subunit TERM 1757 1415935 - 1415960 + gT 85 -8.5 -4.21462 | gap 1, overlap 1415929 ATAACCAGTCCGCAA TGCT-GGTAAAT TGT ATTTACCCAGCA TTTTACGTGCTAACT TERM 1758 1416383 - 1416411 + gT 100 -14.8 -3.19175 | TGTGTTATGGCTTGT TTAGCAGCACTT TCATT AAGTGCTGCTAA TTCAATCTGTTCCGC LCK_01346 1419091 - 1416794 - | DNA internalization-related competence protein ComEC/Rec2 TERM 1759 1417003 - 1417013 + gr 71 -6.8 -3.99957 | overlap 1417011 AAATTATACCATACT GTGG TTG CCAC TTTCTAAGTGTTTCC TERM 1760 1417651 - 1417637 - GR 77 -8.6 -3.56562 | overlap 1417629 AAACTCACCATATAA TGGGTA ACG TACCCA AATAGTCCCAAAAAA TERM 1761 1418441 - 1418423 - GR 83 -10.4 -3.26743 | opp_overlap 1418422 1418423, overlap 1418421 ATTAACATAAAACGA TTTTGGTG CAG CACCAAAA ATTACTGACTCAGCA TERM 1762 1418423 - 1418441 + gr 77 -10.4 -2.50816 | opp_overlap 1418423 1418421, overlap 1418422 ATTAACATAAAACGA TTTTGGTG CAG CACCAAAA ATTACTGACTCAGCA LCK_01347 1419743 - 1419093 - | DNA uptake protein TERM 1763 1419816 - 1419797 - R 95 -8.6 -5.54079 | opp_overlap 1419797 1419800 TGAAAAACTAAAAAA CACCTGAC AATT GTCAGATG TTAGTTTGGCATGTA LCK_01348 1421583 - 1420048 - | putative chloride channel protein TERM 1764 1420513 - 1420499 - G 73 -5.8 -4.61747 | opp_overlap 1420498, overlap 1420510 CCAACAACCATAAAA TCAATA ACA TATTGA CTCTCTAGCCAACCC TERM 1765 1420553 - 1420540 - G 70 -3.1 -4.88795 | overlap 1420543 ACCCAATAAAACAAA CAACT GCCC AGTCG CAGCACTAATTAATG LCK_01349 1421640 - 1421897 + | hypothetical protein TERM 1766 1421931 - 1421895 - T 85 -6.8 -5.35721 | gap 2, opp_overlap 1421895 ATACAACAAGAAAAA TGACGAGACA-G-GCTAT CCT ATAGCTCATTTCTCGTCA TTTTTTTGTCCTGAT TERM 1767 1421895 - 1421931 + T 89 -6.8 -5.67967 | gap 2, opp_overlap 1421895 ATACAACAAGAAAAA TGACGAGACA-G-GCTAT CCT ATAGCTCATTTCTCGTCA TTTTTTTGTCCTGAT LCK_01350 1422392 - 1421919 - | hypothetical protein glmU 1423873 - 1422500 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 1768 1422922 - 1422906 - G 71 -9.5 -2.76046 | opp_overlap 1422902, overlap 1422903 CCAATGGTAACATGA TCAGCAA TCG TTGCTGA CTCAATGTGTGAATC LCK_01352 1424712 - 1423879 - | adenine/guanine phosphoribosyltransferase TERM 1769 1424723 - 1424745 + r 83 -7.8 -4.72556 | opp_overlap 1424718 TTCATAATATGTTAA CGTGCTAA AAGTTAA TTAGCACG TTTTCTCCTTTTTGA TERM 1770 1424787 - 1424820 + r 93 -8.3 -5.47399 | opp_overlap 1424786 1424789 1424795, overlap 1424789 TGAGTTTAATTATAG CACTTAAATACCG TCAATGTT CGGTATTTAAGCG TTTTTTTGAAATTGC TERM 1771 1424818 - 1424789 - R 72 -9.5 -2.70143 | opp_overlap 1424787 1424789, overlap 1424786 1424795 AGTTTAATTATAGCA CTTAAATACCG TCAATGTT CGGTATTTAAG CGTTTTTTTGAAATT TERM 1772 1424789 - 1424818 + r 73 -9.5 -2.91328 | opp_overlap 1424789 1424786 1424795, overlap 1424787 AGTTTAATTATAGCA CTTAAATACCG TCAATGTT CGGTATTTAAG CGTTTTTTTGAAATT LCK_01353 1425605 - 1424814 - | ABC-type Mn2+/Zn2+ transport system, permease component TERM 1773 1425447 - 1425432 - G 76 -9 -3.63991 | CATCATCCCCAACAA TGCTGG CCAA CCAGCA AACAGGGCAAATGCT TERM 1774 1425471 - 1425459 - G 70 -7.7 -3.69902 | AGCAAACAGGGCAAA TGCTG CAC CAGCA AAACCAATCTCACTT LCK_01354 1426302 - 1425598 - | ABC-type Mn/Zn transport system, ATPase component LCK_01355 1427153 - 1426299 - | 3-phosphoglycerate kinase TERM 1775 1427195 - 1427184 - R 93 -7.2 -5.64274 | TCACCTACAAAAAAA GCCC TAAC GGGC GAAATAAAAATTAAT LCK_01356 1427436 - 1427206 - | veg protein TERM 1776 1427316 - 1427342 + g 75 -5.9 -4.79949 | overlap 1427317 ACAGCGAGGGGAATG TCGAACGTAAT ACACC ACTACGTTCGG TTATTTTTTTGCGAC ksgA 1428427 - 1427540 - | dimethyladenosine transferase LCK_01358 1428992 - 1428429 - | small primase-like protein LCK_01359 1429782 - 1428985 - | Mg-dependent DNase TERM 1777 1429943 - 1429931 - R 91 -4.7 -5.89921 | opp_overlap 1429931 ATCATAATAAAAAAA GCCGC TAG GCGCC TTTTCAATCAATCTT nusB 1430373 - 1429951 - | transcription termination factor asp 1430834 - 1430373 - | alkaline shock protein TERM 1778 1430890 - 1430864 - R 71 -6.7 -4.11773 | opp_overlap 1430870, overlap 1430852 1430870 AAATATTTCCTAAAA TAAAAAGTTCC GCTGG GGAACTTTTTC AAACGTGTTCCCTGT TERM 1779 1430884 - 1430870 - R 84 -5.7 -5.45802 | opp_overlap 1430870, overlap 1430864 TTCCTAAAATAAAAA GTTCC GCTGG GGAAC TTTTTCAAACGTGTT TERM 1780 1430870 - 1430884 + r 71 -5.7 -4.59511 | opp_overlap 1430870 1430864 TTCCTAAAATAAAAA GTTCC GCTGG GGAAC TTTTTCAAACGTGTT efp 1431553 - 1430993 - | translation elongation factor P TERM 1781 1431643 - 1431633 - R 70 -4 -4.84673 | TCAAACAAGATAAAA TTGT ACC ACAA AAAACCTTATTTCTC LCK_01363 1432114 - 1431650 - | transcriptional regulator TERM 1782 1432025 - 1432015 - G 79 -6.8 -4.65263 | opp_overlap 1432014 ACTGTTCAAAAGAAA TGCC ATA GGCA CTCGTTGGCTGTGAA LCK_01364 1432684 - 1432130 - | Rossmann fold nucleotide-binding protein TERM 1783 1432294 - 1432269 - G 70 -3.3 -4.95806 | opp_overlap 1432269 AAACTATCATAAAAA CCATTTGTATT CAGT AATACCAGTGG CTTATGGTGTAGCCC LCK_01365 1432836 - 1433048 + | hypothetical protein TERM 1784 1434511 - 1434497 - g 70 -2.8 -5.10497 | opp_overlap 1434508 AATTGATTTAAAAAA GAAAGA AAT TCTATC TGGACCGGATATTTT LCK_01366 1433052 - 1434734 + | metallo-beta-lactamase superfamily hydrolase TERM 1785 1434740 - 1434758 + F 100 -10.3 -5.21709 | opp_overlap 1434736 1434740 TATGATTTAAACCAA GCACCCA TCTAT TGGGTGC TTTTTTAATATAAAC TERM 1786 1434758 - 1434740 - f 86 -10.3 -3.55122 | opp_overlap 1434740, overlap 1434736 TATGATTTAAACCAA GCACCCA TCTAT TGGGTGC TTTTTTAATATAAAC LCK_01367 1434902 - 1436419 + | hypothetical protein TERM 1787 1436428 - 1436439 + F 100 -7.2 -5.80364 | AGGTTAACTGGCATA GCCC TAAT GGGC TTTTTTTGTTACAAT TERM 1788 1437306 - 1437276 - g 82 -6.2 -4.98616 | opp_overlap 1437302, overlap 1437301 1437302 TTAAAAGACCAAAAA GTACACCATTTTAC ACT ACAAAAAGGTGCAC AAATACACGTGCATG LCK_01368 1436484 - 1437413 + | sphingosine kinase TERM 1789 1437445 - 1437422 - T 84 -6 -5.28481 | opp_overlap 1437422 GATTTAACTAAAAAA GATGCTCATG TTAT CGTGAACATC TTTTTTAATTAAATC TERM 1790 1437422 - 1437445 + T 84 -6 -5.28481 | opp_overlap 1437422 GATTTAACTAAAAAA GATGCTCATG TTAT CGTGAACATC TTTTTTAATTAAATC LCK_01369 1438388 - 1437450 - | ADP-ribosylglycohydrolase metK 1439579 - 1438422 - | S-adenosylmethionine synthetase TERM 1791 1439667 - 1439639 - H 100 -13.9 -4.54727 | GGCCGCAAATTAAAA GCGCGTCCCAA TGATAAG TCGGGACGCGC TTAACGTGACGACTA LCK_01371 1439891 - 1440709 + | integral membrane protein TERM 1792 1440735 - 1440715 - T 100 -12.7 -5.55664 | opp_overlap 1440715 CTATCATTAAAAAAA GTGTCTGTT CAT AACAGACAC TTTTTTATTTGATTA TERM 1793 1440715 - 1440735 + T 100 -12.7 -5.72053 | opp_overlap 1440715 CTATCATTAAAAAAA GTGTCTGTT CAT AACAGACAC TTTTTTATTTGATTA LCK_01372 1441342 - 1440740 - | hypothetical protein LCK_01373 1442210 - 1441332 - | hypothetical protein LCK_01374 1442986 - 1442261 - | integral membrane protein LCK_01375 1443681 - 1443007 - | integral membrane protein TERM 1794 1443625 - 1443612 - G 79 -6.7 -4.51196 | CTGAAACTGATAAAA TGCCA TCAT TGGCA CCCATAACGCCTGCA fur 1443805 - 1444212 + | ferric uptake regulator TERM 1795 1444239 - 1444217 - T 93 -7.8 -5.64421 | opp_overlap 1444217 ATGCCAAATAAAAAA CGTTTACC GCCAATG GGTAAACG TTTTTTTATTATCTT TERM 1796 1444217 - 1444239 + T 100 -7.8 -5.94214 | opp_overlap 1444217 ATGCCAAATAAAAAA CGTTTACC GCCAATG GGTAAACG TTTTTTTATTATCTT LCK_01377 1444700 - 1444248 - | methyl-accepting chemotaxis protein pacL 1447369 - 1444706 - | cation transport ATPase TERM 1797 1446645 - 1446631 - G 71 -6.4 -4.18401 | opp_overlap 1446631 1446633, overlap 1446633 TCAGATATGTCAAAA CACGAC CTA GTCGTA TTAAGTTTTCTTGCA TERM 1798 1447474 - 1447427 - R 100 -14.5 -5.40464 | gap 1 CACCAGAAACAAAAA GACTCATGTAAATAACCCAACG AACAA CGTCTGGTT-TTTACATGAGTC TCACCGTTTCAGATA LCK_01379 1449501 - 1447651 - | hypothetical protein TERM 1799 1449446 - 1449428 - G 70 -8.8 -3.36492 | TTTGTAATTTGATAA TCGGCTTG CGC CATGCCGA TGCCAATCACAAACG TERM 1800 1449465 - 1449491 + g 80 -2.4 -5.64006 | overlap 1449468 CAATCACAAACGTCG TTATCATAGTTA AGA TAATTGTGATTA TTTTTTTCATTAGCT TERM 1801 1449468 - 1449488 + g 71 -4.1 -4.88485 | overlap 1449465 TCACAAACGTCGTTA TCATAGTTA AGA TAATTGTGA TTATTTTTTTCATTA TERM 1802 1449989 - 1450005 + G 71 -5.1 -4.51777 | ACACAGTATCCTCGT TGAAACC ATC GGTATCA TTTTAGTTGTGATAT LCK_01380 1449690 - 1450358 + | hypothetical protein TERM 1803 1450668 - 1450699 + F 100 -17.5 -5.72207 | overlap 1450657 1450658 GTAACGCGCTATTTA GCCGCTTCTGTAT TTAGGT ATACAGAAGCGGC TTTTTTTCGTTTAAC TERM 1804 1450793 - 1450809 + G 70 -8.7 -3.36273 | AAAAAACTGGCTGAT TGGTGGC GCT GCCATCA TTGCTATTGGCGCCA TERM 1805 1451549 - 1451519 - g 83 -4.8 -5.22794 | ACAAGTACTAAAAAA TGTTGTCAAAGCTT ATC AAACTCAAACAACA AAAGATGTGATTAAA plpB 1450767 - 1451612 + | Outer membrane lipoprotein LCK_01382 1451637 - 1452479 + | ABC-type metal ion transport system, periplasmic component/surface antigen LCK_01383 1452544 - 1453896 + | acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase LCK_01384 1453909 - 1454994 + | ABC-type metal ion transport system, ATPase component ydcC 1454991 - 1455686 + | ABC-type metal ion transport system, permease component TERM 1806 1455710 - 1455690 - T 100 -11.2 -5.38958 | opp_overlap 1455690 AGTCATAAATAAAAA GCCTTGGT GTATA ACCAAGGC TTTTTTAACGTGCTA TERM 1807 1455690 - 1455710 + T 100 -11.2 -5.06451 | opp_overlap 1455690 AGTCATAAATAAAAA GCCTTGGT GTATA ACCAAGGC TTTTTTAACGTGCTA LCK_01386 1456422 - 1455715 - | transcriptional regulator nagA 1457567 - 1456425 - | N-acetylglucosamine-6-phosphate deacetylase LCK_01388 1458239 - 1457727 - | phosphatidylglycerophosphatase A TERM 1808 1458429 - 1458442 + r 100 -6.7 -6.02546 | opp_overlap 1458429 GGGGCAATTTCTAAA CAGTC TTCG GACTG TTTTTTTTGGTTTAA gshR4 1459881 - 1458544 - | putative glutathione reductase TERM 1809 1459660 - 1459686 + g 90 -7.3 -5.30339 | opp_overlap 1459660 ATTAATTTGTGAATA GCCATGCAAAC CTCGC GTTTGTAAGGC TTTTTGTCTTTTAAT TERM 1810 1459821 - 1459805 - G 79 -9.5 -3.64822 | ACTTTTTTACCCAAA GCTTTTG CGG CAAAAGC GGCTGCAAGTCCTGC TERM 1811 1460100 - 1460125 + H 82 -3.2 -5.68438 | opp_overlap 1460100 GTGTATTTTAGCAAA CGCATGGC TCATCTAATT GCCAGGCG TTTTTTATTTGCTAA LCK_01390 1460224 - 1460805 + | hypothetical protein TERM 1812 1460872 - 1460860 - g 74 -4.8 -4.66609 | CACCGTACTCAAAAA CGTC TCGAT GACG TTGCGACCTGGTAGT LCK_01391 1460798 - 1462207 + | ABC-type cobalt transport system, ATPase component LCK_01392 1462204 - 1462866 + | ABC-type cobalt transport system, permease component CbiQ TERM 1813 1463466 - 1463454 - g 76 -3.3 -5.23396 | opp_overlap 1463461 1463462 AATAATGAACAAAAA GAGCA TGT TGCAC AAACATTTTTATGCA LCK_01393 1462878 - 1463549 + | putative transcription activator TERM 1814 1463554 - 1463586 + T 100 -10.7 -5.22794 | opp_overlap 1463554 TTCAACATTAAAAAA TAACCTTGCAGGC AACCAAC GCCTGTGAGGTTA TTTTTTAATCATTCT TERM 1815 1463586 - 1463554 - T 89 -7 -5.27779 | opp_overlap 1463554 TTCAACATTAAAAAA TAACCTTGCAGGCA ACCAA CGCCTGTGAGGTTA TTTTTTAATCATTCT LCK_01394 1468087 - 1463600 - | dextransucrase TERM 1816 1466364 - 1466386 + g 73 -7.6 -4.05714 | ACTAAACTGTGTTCA CGGGTTGGCT CAA GGCCACTCCG TTTATCATTAGGCAT TERM 1817 1467487 - 1467510 + g 77 -6 -4.55798 | overlap 1467490 TCGTGTCTAACTCTG TACCAGCAGA AATT TCTGCTGTTG TTTTGGTTTGAGGTG TERM 1818 1467490 - 1467507 + g 90 -9.9 -4.38472 | overlap 1467487 TGTCTAACTCTGTAC CAGCAGA AATT TCTGCTG TTGTTTTGGTTTGAG TERM 1819 1467925 - 1467939 + g 73 -5.8 -4.49352 | CGACTTTACTTTTTA CTATTT TTG AAATAG TTTGTGTTTTGCTAT TERM 1820 1468254 - 1468277 + r 76 -3.9 -5.34055 | opp_overlap 1468244 1468254, overlap 1468244 TAGGACAATAAAAAA GCAAGGA TCACAGGCAC TCCTTGC TTTTTTACTATTTAT TERM 1821 1468277 - 1468254 - R 79 -3.9 -5.58179 | opp_overlap 1468254 1468244, overlap 1468244 TAGGACAATAAAAAA GCAAGGA TCACAGGCAC TCCTTGC TTTTTTACTATTTAT LCK_01395 1469655 - 1468285 - | major facilitator superfamily permease TERM 1822 1468585 - 1468558 - G 74 -6.2 -4.35483 | GGGCATCATAATAAA GGCATTGCCACC TTCT AGTAGCATCGCC GCCAGTAAACCAATG TERM 1823 1468962 - 1468943 - G 76 -3.6 -5.32699 | overlap 1468951 CGAAACACGAAAAAA GTCAGT AATATCAG ACTGAC AACTAAAATCAGCCA TERM 1824 1469709 - 1469688 - H 75 -8.9 -3.49938 | opp_overlap 1469688 GTAAATAACTTATAA TCATTCTAA ACTT TTAGAATGA TTTTTTCAAGTTAAA TERM 1825 1469688 - 1469709 + H 95 -8.9 -5.09426 | opp_overlap 1469688 GTAAATAACTTATAA TCATTCTAA ACTT TTAGAATGA TTTTTTCAAGTTAAA TERM 1826 1470229 - 1470241 + G 71 -6.3 -4.18506 | opp_overlap 1470229 GTGTGGTGGATGAAA CGAAA GGT TTTCG TTATTTTGAAGGTCG LCK_01396 1469805 - 1470764 + | Iron dependent peroxidase TERM 1827 1470811 - 1470783 - T 70 -4.5 -4.66609 | opp_overlap 1470783 TATTTGATTCAAAAA GCGGCTCACAC CTTATTC GTGTTAGTCGC TTTTTTTGCTTATCA TERM 1828 1470783 - 1470811 + T 89 -6.7 -5.68023 | opp_overlap 1470783 TATTTGATTCAAAAA GCGGCTCACAC CTTATTC GTGTTAGTCGC TTTTTTTGCTTATCA gldA 1471923 - 1470847 - | glycerol dehydrogenase LCK_01398 1472673 - 1471939 - | dehydrogenase cinA 1473945 - 1472692 - | CinA-like protein TERM 1829 1473595 - 1473617 + g 74 -9.2 -3.57144 | opp_overlap 1473594 1473591 TTCTAAGAAGAGCAC TTGCCGATAA TTA TTATCGGCCA TTTCAACATCAACAG tpiS 1474660 - 1473953 - | triosephosphate isomerase LCK_01401 1475211 - 1474657 - | modulator of drug activity LCK_01402 1476426 - 1475227 - | ATPase LCK_01403 1476589 - 1476852 + | putative transcriptional regulator TERM 1830 1476852 - 1476892 + T 84 -6.4 -5.09426 | gap 1, opp_overlap 1476857, overlap 1476857 TAATACATCAAATTA AAAAACATCTAACAGT-CA TTAA TGTACTGTTAGATGTTTCA TTTTTTGGGCTTGGG TERM 1831 1476857 - 1476887 + T 100 -10.7 -4.42765 | gap 1, opp_overlap 1476857, overlap 1476852 CATCAAATTAAAAAA CATCTAACAGT-CA TTAA TGTACTGTTAGATG TTTCATTTTTTGGGC TERM 1832 1476887 - 1476857 - T 100 -10.7 -5.40004 | gap 1, opp_overlap 1476857 1476852 CATCAAATTAAAAAA CATCTAACAGT-CA TTAA TGTACTGTTAGATG TTTCATTTTTTGGGC LCK_01404 1478968 - 1476890 - | topoisomerase IA TERM 1833 1477740 - 1477720 - G 72 -9.8 -3.02043 | AATCTTCTGCCAACA TGGCCAAA TAGTT TTTGGCCA ATACCTCATAGATAG TERM 1834 1479138 - 1479109 - R 100 -18.1 -5.2112 | opp_overlap 1479109 AACATCAGCAAAAAA GCACAGTTGAATG CGTT CATTCAACTGTGC TTTTTATTGGCCAAT TERM 1835 1479109 - 1479138 + r 100 -18.1 -5.06816 | opp_overlap 1479109 AACATCAGCAAAAAA GCACAGTTGAATG CGTT CATTCAACTGTGC TTTTTATTGGCCAAT LCK_01405 1479521 - 1479129 - | major facilitator superfamily permease LCK_01406 1479975 - 1479508 - | response regulator LCK_01407 1480782 - 1480036 - | major facilitator superfamily permease LCK_01408 1481651 - 1480779 - | ABC-type multidrug transport system, ATPase component TERM 1836 1481715 - 1481733 + r 82 -7.4 -4.59424 | opp_overlap 1481715, overlap 1481710 GCATCAAAAAAAAAA CCGCTTTT GTG ATAAGCGG TTTTAATTTACCTTT TERM 1837 1481733 - 1481715 - R 100 -7.4 -6.41805 | opp_overlap 1481715 1481710 GCATCAAAAAAAAAA CCGCTTTT GTG ATAAGCGG TTTTAATTTACCTTT pgm3B 1482444 - 1481776 - | Beta-phosphoglucomutase TERM 1838 1482215 - 1482225 + g 75 -5.4 -4.77438 | TTATTTTTACGTGCT GCAA AAT TTGC TTTTTCATCATCCGT LCK_01410 1484809 - 1482437 - | trehalose or maltose hydrolase ( phosphorylases) LCK_01411 1486843 - 1484822 - | phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific TERM 1839 1485369 - 1485357 - G 77 -7.7 -4.20834 | CCGAAAATAACCAAA GCTTG ATA CAAGC CACCAATAATCAATC TERM 1840 1485919 - 1485907 - G 71 -4.1 -4.90302 | GATCAATAAAATAAA TCGCT GGA AACGA CGCTTTATTAGAAAA TERM 1841 1486356 - 1486384 + g 76 -4.5 -5.055 | overlap 1486349 1486378 TCGTATTGGCTACCA GTTGGACTGGCGG CTT CTGTCAGTTGGAC TTTTTTCAACGTTAC TERM 1842 1486797 - 1486774 - G 74 -5.3 -4.72272 | CTTCTCGACTAAAAA CGTTGTCCT TTACAG ATGACAACG CTATCAGTTGCCCAG treR 1487589 - 1486891 - | transcription regulator TERM 1843 1487365 - 1487351 - G 72 -8.6 -3.44319 | GCTAATTCACGATAA CTCTCA ACA TGAGAG ATTGGAAATGAATAA TERM 1844 1487771 - 1487748 - H 100 -14 -5.86061 | TTTTATTAAAAAAAA TAGCCCAGAA ATAA TTCTGGGCTA CTACAAAAATGAATC TERM 1845 1487947 - 1487967 + H 100 -10.4 -5.85425 | opp_overlap 1487935 ATACGTCACTCTTAA CGTGCGCG TATAT CGTGCACG TTTTTTATTTGTTTA LCK_01413 1488016 - 1488339 + | hypothetical protein TERM 1846 1488499 - 1488518 + T 100 -10 -5.16206 | opp_overlap 1488499 CACGAGCTATATCAA GTCGCAAC TTCG GTTGCGGC TTTTTATGTTGGTTT TERM 1847 1488575 - 1488546 - T 87 -6.6 -5.47218 | opp_overlap 1488546 TTTGAGTTAAAAAAA GCTTAATGATAA TATGTC TAATCATTAAGC TTTTAAAAAAACATT LCK_01414 1490330 - 1488939 - | hypothetical protein TERM 1848 1490409 - 1490391 - R 74 -5.2 -4.82667 | overlap 1490384 TTATTATAGCAAAAA GGCCACTC ATT AAGCGACC TTCCAGCTATTATCG LCK_01415 1493131 - 1490441 - | cation transport ATPase TERM 1849 1493372 - 1493353 - R 95 -6.4 -5.79595 | opp_overlap 1493353 1493355, overlap 1493356 GGCGAAAATAAAAAA CACCTGAC AATC GTCAGACG TTTTACTGATTTATT LCK_01416 1494702 - 1493383 - | amino acid permease-associated region TERM 1850 1494578 - 1494565 - G 73 -6.7 -4.18421 | TAACCATACAAACAA CGACA TGCT TGTCG AACCAGTTGCATCAG TERM 1851 1494926 - 1494936 + H 91 -5.4 -5.88471 | ACGCCAGCTTGACTA GTTG ACA CAAC TTTTTTTTGATGATA TERM 1852 1495022 - 1495043 + H 85 -8.7 -4.26475 | GAATGGGTATAGATT GGACGTTGT CAAT GCGACGTCC TCTTTTTTATACACT LCK_01417 1495091 - 1496263 + | multidrug ABC transporter TERM 1853 1496270 - 1496317 + T 91 -13 -3.27298 | opp_overlap 1496277, overlap 1496272 1496277 CCAGCTTAACGACAT TTTAAAAGAGACGTCCAATCCA TTAA TAGATTGCACGTCTCTTTTATA TTAATAATTAACAGC TERM 1854 1496272 - 1496315 + T 100 -15.6 -3.20227 | opp_overlap 1496277, overlap 1496270 1496277 AGCTTAACGACATTT TAAAAGAGACGTCCAATCCA TTAA TAGATTGCACGTCTCTTTTA TATTAATAATTAACA TERM 1855 1496310 - 1496277 - T 100 -13.3 -4.18058 | opp_overlap 1496272 1496270 1496277 AACGACATTTTAAAA GAGACGTCCAATCCA TTAA TAGATTGCACGTCTC TTTTATATTAATAAT TERM 1856 1496277 - 1496310 + T 100 -11.1 -4.71186 | opp_overlap 1496277, overlap 1496272 1496270 AACGACATTTTAAAA GAGACGTCCAATCCA TTAA TAGATTGCACGTCTC TTTTATATTAATAAT LCK_01418 1496629 - 1496318 - | hypothetical protein LCK_01419 1499012 - 1496982 - | lysin TERM 1857 1497505 - 1497481 - G 79 -9.5 -3.63744 | overlap 1497479 TCTTGCTCTAAAACA TGACTAATAAT GTT ATTATTAGCCA GCCTAACCGTATAAT TERM 1858 1499353 - 1499323 - R 100 -16.4 -5.70829 | opp_overlap 1499323 AACATTACAAAAAAA CCTTCAATCACGAA TCA TTCATGATTGAAGG TTTTAAACTGATGCC TERM 1859 1499323 - 1499353 + r 100 -14.2 -4.15565 | opp_overlap 1499323 AACATTACAAAAAAA CCTTCAATCACGAA TCA TTCATGATTGAAGG TTTTAAACTGATGCC TERM 1860 1499636 - 1499655 + r 79 -9.4 -3.47573 | opp_overlap 1499636 AATGGCACAAAAAAA GCAAATCT TTTA AGATTTGC TTCTCATATAACTCC TERM 1861 1499655 - 1499636 - R 100 -9.4 -5.63504 | opp_overlap 1499636 AATGGCACAAAAAAA GCAAATCT TTTA AGATTTGC TTCTCATATAACTCC lysS 1501302 - 1499821 - | lysyl-tRNA synthetase TERM 1862 1501329 - 1501312 - R 70 -7 -3.87815 | opp_overlap 1501312 1501311 TGCCATGTGTATAAA GTGCTC TGAATT GAGCAC GTTTCCTCCATATTA TERM 1863 1501347 - 1501363 + r 79 -9.5 -3.34233 | opp_overlap 1501345 TTCCTCCATATTATT CTGGTTA TAT TAACCAG TTCTAAAAGTTCTCA TERM 1864 1501428 - 1501402 - R 85 -6.6 -5.2422 | opp_overlap 1501402 1501405, overlap 1501407 AACTATACCAAAAAA CAAAGCTAACCT CAA AGGTTAGTCCTG ATTATTCTTCTTAAT TERM 1865 1501423 - 1501407 - R 80 -9.5 -3.63875 | opp_overlap 1501405 1501402, overlap 1501402 TACCAAAAAACAAAG CTAACCT CAA AGGTTAG TCCTGATTATTCTTC hsp33 1502316 - 1501420 - | disulfide bond chaperones of the HSP33 family TERM 1866 1502373 - 1502355 - R 100 -9.6 -5.83211 | opp_overlap 1502353 1502351 1502355 CATTAAAATAAAAAA GTTGACGT TAA ACGCCAAC TATCATTTTACTTAT ftsH 1504471 - 1502381 - | membrane ATPase FtsH TERM 1867 1503676 - 1503663 - G 76 -6.7 -4.42806 | GCATTTTCAAACAAA TCACG TACA CGTGA AGCACCAACACCAAC hpt2 1505034 - 1504495 - | hypoxanthine phosphoribosyltransferase mesJ 1506341 - 1505034 - | ATPase TERM 1868 1505243 - 1505257 + g 72 -4.3 -4.72272 | GCCCATGTATGAGTG CAAGT TTATC ACTTG TTTTTACTGGGCGCA TERM 1869 1506366 - 1506352 - R 88 -7.8 -4.95758 | opp_overlap 1506351 ATCATATTAGAAAAA GCACCA TTC CGGTGC CCTATTACTGCTTAT LCK_01425 1506766 - 1506371 - | septum formation initiator LCK_01426 1507122 - 1506829 - | ribosome-associated heat shock protein TERM 1870 1507073 - 1507098 + g 74 -6.1 -4.33907 | opp_overlap 1507073 ATTTCTTTTGCAACA GTGCGACGCTT GATT AAGCGTGACAC TTTTAAATATTTATC mfd 1510676 - 1507140 - | transcription-repair coupling factor TERM 1871 1508513 - 1508534 + g 84 -2.3 -5.79595 | gap 1, overlap 1508518 CTACATCAAGTTCAT GTGCTTCAAG TTC CTTGAT-CAC TTTTTTATTTTGCGC TERM 1872 1510013 - 1510042 + g 100 -10.9 -5.4251 | gap 1 AGTCGGTTGCCGGCT GTATCGTTGTCGCT TCA AGC-ACAGCGATAC TTTTTTGTGTCTCAA pth 1511338 - 1510697 - | peptidyl-tRNA hydrolase LCK_01429 1511386 - 1512033 + | CBS domain-containing protein agl2 1512220 - 1513920 + | Alpha-glucosidase TERM 1873 1515338 - 1515315 - g 70 -3.2 -4.98616 | gap 1, overlap 1515318 GCAAAACACCAAAAA GAAG-CTGC CGAGGAT GCAGCCTTC AGCAACTAATGAAAT TERM 1874 1515334 - 1515318 - g 71 -5.1 -4.54753 | overlap 1515315 AAACACCAAAAAGAA GCTGC CGAGGAT GCAGC CTTCAGCAACTAATG LCK_01431 1513938 - 1515347 + | Na+:melibiose symporter LCK_01432 1515366 - 1515611 + | hypothetical protein TERM 1875 1515622 - 1515636 + F 100 -10 -5.41143 | opp_overlap 1515622 CTTAACATGTCAAAA CGTCTG TAT CAGACG TTTTTTTAGAAAATA TERM 1876 1515636 - 1515622 - f 93 -10 -4.1964 | opp_overlap 1515622 CTTAACATGTCAAAA CGTCTG TAT CAGACG TTTTTTTAGAAAATA LCK_01433 1515677 - 1516663 + | putative transcriptional regulator; repressor of sugar transport operon TERM 1877 1516673 - 1516652 - T 100 -9.5 -5.67063 | opp_overlap 1516652 TTCACTACAAAAAAA GTTAGACCA TAAA CGGTCTAAC TTTTTTAATTCAAAT TERM 1878 1516652 - 1516673 + T 95 -8.8 -5.27477 | opp_overlap 1516652 TTCACTACAAAAAAA GTTAGACC ATAAAC GGTCTAAC TTTTTTAATTCAAAT LCK_01434 1517570 - 1516683 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase LCK_01435 1518260 - 1517616 - | hypothetical protein LCK_01436 1518700 - 1518257 - | hypothetical protein LCK_01437 1519222 - 1518812 - | flavodoxin, putative TERM 1879 1519340 - 1519314 - R 78 -2.4 -5.66684 | gap 1, overlap 1519315 CAATTCACAAAAAAA CGATAAACCCT ATCAAA AAGGTT-ATCG TTTGACTGTATCACT groEL 1520978 - 1519359 - | 60 kDa chaperonin groES 1521338 - 1521054 - | 10 kDa chaperonin LCK_01440 1522322 - 1521489 - | YitT family protein LCK_01441 1522699 - 1522322 - | ManO TERM 1880 1522798 - 1522823 + r 80 -10.4 -2.99558 | opp_overlap 1522798 1522799, overlap 1522798 ATTTATATGTACAAA GGCGCTCGTC GCAGAA GACGAGCGCA CTTTATAAGTTATGA TERM 1881 1522823 - 1522798 - R 93 -10.4 -3.9534 | opp_overlap 1522798 1522798, overlap 1522799 ATTTATATGTACAAA GGCGCTCGTC GCAGAA GACGAGCGCA CTTTATAAGTTATGA TERM 1882 1522798 - 1522824 + r 93 -10.2 -4.00468 | gap 1, opp_overlap 1522798 1522799, overlap 1522798 ATTTATATGTACAAA G-GCGCTCGTC GCAGAA GACGAGCGCAC TTTATAAGTTATGAT TERM 1883 1522822 - 1522799 - R 90 -13.9 -2.96722 | opp_overlap 1522798 1522798, overlap 1522798 TTTATATGTACAAAG GCGCTCGTC GCAGAA GACGAGCGC ACTTTATAAGTTATG manN 1523756 - 1522842 - | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID manM 1524577 - 1523768 - | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC TERM 1884 1523916 - 1523871 - G 75 -7.7 -4.10672 | gap 1, opp_overlap 1523881 1523884, overlap 1523881 1523906 TTAAGGTAAATCAAA GCCAGAGCAACACCGATTGCAC CAA GGGCAATCAATGTTAAT-TGGC TAACAGCAGCTAATG TERM 1885 1524385 - 1524369 - G 73 -10.1 -2.75074 | opp_overlap 1524367, overlap 1524338 1524366 GCTAGCGCAATATCA GGTGCCA CAG CGGCACC AATGTTGGCCCAACC LCK_01444 1525559 - 1524609 - | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB TERM 1886 1524780 - 1524799 + g 90 -9.4 -4.4078 | ACCTTCTGAGTGTGC CATTGAAC CAAC GTTCAATG TTTTAATTGGCACAC manA 1526745 - 1525765 - | mannose-6-phosphate isomerase, class I TERM 1887 1526856 - 1526828 - R 93 -6.9 -5.64304 | TAACACAACAAAAAA GATTGTTTCAAAA TTA TTTAAAAACAATC CCTTTAATGTTGTGA LCK_01446 1528683 - 1527004 - | putative glycosyl transferase yohH 1530208 - 1528664 - | lipopolysaccharide biosynthesis protein TERM 1888 1529407 - 1529429 + g 70 -5.7 -4.33767 | gap 1, opp_overlap 1529407 1529406, overlap 1529411 TCAAAATTGGATAAC TGTACCCTAT TCGA ATAGGGT-CA TTTTCCTGAGTTTCT TERM 1889 1530245 - 1530261 + r 100 -10.9 -4.8083 | GTTTTTTGTATGTAC GAGTGAC ACC GTCACTC TTTTTGATCATATTA LCK_01448 1532007 - 1530274 - | cell surface protein TERM 1890 1532301 - 1532290 - R 100 -7.2 -5.95539 | opp_overlap 1532285 1532290 TTTCAAATAAAAAAA GCGG TTAA CCGC TTTTGTATTACTTTA TERM 1891 1532290 - 1532301 + r 83 -7.2 -4.76274 | opp_overlap 1532290, overlap 1532285 TTTCAAATAAAAAAA GCGG TTAA CCGC TTTTGTATTACTTTA TERM 1892 1532348 - 1532338 - R 76 -4 -5.22943 | ATTAAATCGAAAAAA TATC CCC GATA GCCATTTCTAGCCCA LCK_01449 1532482 - 1532324 - | hypothetical protein LCK_01450 1532689 - 1533069 + | transcriptional regulator LCK_01451 1533053 - 1533508 + | hypothetical protein TERM 1893 1533497 - 1533525 + T 74 -3.2 -5.31059 | opp_overlap 1533497 ACGCCAATCAAAAAA GTATGTGAGT AAATTAAAA ACACACATAC TTTTTTAGTTACTAT TERM 1894 1533525 - 1533497 - T 74 -3.2 -5.27477 | opp_overlap 1533497 ACGCCAATCAAAAAA GTATGTGAGT AAATTAAAA ACACACATAC TTTTTTAGTTACTAT LCK_01452 1534274 - 1533537 - | nitroreductase LCK_01453 1534399 - 1534881 + | hypothetical protein TERM 1895 1534879 - 1534895 + T 95 -6.6 -5.86061 | opp_overlap 1534879 CCCGATCCAAAAAAA TAAGGC TTGAC GCCTTA TTTTTTTTGCTAACC TERM 1896 1534895 - 1534879 - T 87 -6.6 -5.47218 | opp_overlap 1534879 CCCGATCCAAAAAAA TAAGGC TTGAC GCCTTA TTTTTTTTGCTAACC LCK_01454 1535736 - 1534930 - | HAD superfamily hydrolase TERM 1897 1535621 - 1535646 + g 71 -6.9 -3.97088 | gap 1, opp_overlap 1535621 1535633 ACTTGTCGCCCAGAA GC-CGCGACA AAACGCA TGTCGCGCGC TTTCATATTATCCAA TERM 1898 1535942 - 1535913 - R 86 -12.3 -2.63633 | opp_overlap 1535913 1535921, overlap 1535921 TTATAACATATTAAT TTTAAAAACCGCC TTTT GGCGGTTTTTAAC TAAATTGCTCAAGAT TERM 1899 1535913 - 1535942 + r 86 -12.3 -2.56715 | opp_overlap 1535913 1535921, overlap 1535921 TTATAACATATTAAT TTTAAAAACCGCC TTTT GGCGGTTTTTAAC TAAATTGCTCAAGAT TERM 1900 1535921 - 1535934 + r 100 -9.5 -4.68424 | opp_overlap 1535913 1535921, overlap 1535913 TATTAATTTTAAAAA CCGCC TTTT GGCGG TTTTTAACTAAATTG TERM 1901 1535934 - 1535921 - R 100 -9.5 -4.67904 | opp_overlap 1535921 1535913, overlap 1535913 TATTAATTTTAAAAA CCGCC TTTT GGCGG TTTTTAACTAAATTG LCK_01455 1536975 - 1535938 - | FemX LCK_01456 1537631 - 1536981 - | AT-rich DNA-binding protein TERM 1902 1537703 - 1537717 + r 85 -8.6 -4.20932 | TAAAGCACACTCTAT GTTCAC CTT GTGAAC TTTTGCATAACTATT LCK_01457 1538802 - 1537786 - | metal-dependent protease with chaperone activity LCK_01458 1539215 - 1538805 - | acetyltransferase TERM 1903 1539147 - 1539127 - GR 82 -8.9 -3.91506 | overlap 1539125 TCATGCTCAAAAACA GCCATCGGC CAA GGCGACGGC ACAAATGCTGCTTCG LCK_01459 1539768 - 1539190 - | acetyltransferase LCK_01460 1540441 - 1539731 - | metal-dependent protease-like protein TERM 1904 1540479 - 1540466 - R 88 -5.9 -5.67063 | opp_overlap 1540466 TCTACCACAAAAAAA CCGCC AAAC GACGG TCTTGAACTGTTATA LCK_01461 1541550 - 1540522 - | hypothetical protein LCK_01462 1542106 - 1541540 - | ECF subfamily RNA polymerase sigma factor TERM 1905 1542111 - 1542083 - G 100 -5.3 -5.71712 | GGTTACACAAAAAAA CAAGTACTTCTCA ATA TGAGTCATACTTG CATTTTAAAAAAATT ptsI 1543849 - 1542134 - | phosphoenolpyruvate-protein kinase TERM 1906 1543111 - 1543083 - G 100 -12.5 -4.16016 | opp_overlap 1543085 1543088 TGATCTTTTAACAAA GCCCATTCAGCAC GTT GTGCTGAATAGTC TGCTGCCTTTTGTTG TERM 1907 1543085 - 1543109 + g 80 -11.5 -2.86591 | opp_overlap 1543083, overlap 1543088 ATCTTTTAACAAAGC CCATTCAGCAC GTT GTGCTGAATAG TCTGCTGCCTTTTGT TERM 1908 1543088 - 1543106 + g 81 -11.8 -2.67708 | opp_overlap 1543083, overlap 1543085 TTTTAACAAAGCCCA TTCAGCAC GTT GTGCTGAA TAGTCTGCTGCCTTT ptsH 1544121 - 1543852 - | HPr protein TERM 1909 1544312 - 1544324 + r 75 -4.8 -4.87893 | opp_overlap 1544312 CTGTAAATAAAAAAA CAGC ACGAA GCTG TTTTTGATTAGCCTT TERM 1910 1544324 - 1544312 - R 91 -4.8 -5.95539 | opp_overlap 1544312 CTGTAAATAAAAAAA CAGC ACGAA GCTG TTTTTGATTAGCCTT LCK_01465 1545342 - 1544332 - | putative translation factor (SUA5) LCK_01466 1546370 - 1545372 - | methylase of polypeptide chain release factor prfA 1547445 - 1546372 - | peptide chain release factor 1 TERM 1911 1547086 - 1547074 - G 75 -7.7 -4.03141 | ATCAGCAGCAAATAA GGATG ATT CATCC CCGCCTGCGGCACCG LCK_01468 1548122 - 1547517 - | thymidine kinase TERM 1912 1548734 - 1548723 - g 76 -4.4 -5.055 | CTAACGTCGAAAAAA TTGC TTCT GCAA TTAAGCCTAAGATGT murC2 1548353 - 1549711 + | UDP-N-acetylmuramyl tripeptide synthase LCK_01470 1549711 - 1550442 + | glutamine amidotransferase TERM 1913 1550447 - 1550466 + T 93 -7.9 -5.66684 | opp_overlap 1550447 AATCGTTCTAAAAAA GCAGTCA AACGTC TGACTGC TTTTTTTGTCCCTTA TERM 1914 1550466 - 1550447 - T 95 -8.6 -5.01732 | opp_overlap 1550447 AATCGTTCTAAAAAA GCAGTCAA ACGT CTGACTGC TTTTTTTGTCCCTTA LCK_01471 1550652 - 1550479 - | hypothetical protein TERM 1915 1550639 - 1550626 - G 85 -3.9 -5.67283 | overlap 1550636 AACCCAAATAAAAAA CAAAA TTAA TTTTG TATCAAATGACATAG TERM 1916 1550729 - 1550745 + r 72 -5.9 -4.35885 | AGCTATTGCGCTTGT TTGTGTG ATG TACACAA TTTATTCTGATAAGT LCK_01472 1552591 - 1550747 - | amino acid transporter LCK_01473 1553443 - 1552730 - | glutamine amidotransferase TERM 1917 1552991 - 1553002 + g 72 -4.4 -4.69053 | overlap 1552989 AGCCAAGTGATGTGT TGGT GTCG ACCA TTTTGTTGGATACTG LCK_01474 1555068 - 1553467 - | ABC-type oligopeptide transport system, periplasmic component TERM 1918 1553563 - 1553575 + g 70 -7.7 -3.74658 | GGCCATTTGGTAGAG TGGTG TGA CACCA TTTAAGTCATTATTT LCK_01475 1556362 - 1555235 - | methionine synthase II (cobalamin-independent) TERM 1919 1556566 - 1556541 - R 100 -16.3 -5.5112 | opp_overlap 1556537 TTGACTAATAAAAAA CCGCAGTCTAA ATTA TTAGACTGCGG GACGTGTGATCGTGT luxS 1557286 - 1556810 - | LuxS protein involved in autoinducer AI2 synthesis LCK_01477 1558480 - 1557359 - | methionine synthase II (cobalamin-independent) LCK_01478 1559637 - 1558486 - | cystathionine beta-lyase metB 1560743 - 1559634 - | cystathionine gamma-synthase metA 1561640 - 1560759 - | homoserine trans-succinylase TERM 1920 1561675 - 1561708 + H 87 -12.5 -3.06679 | opp_overlap 1561677 TGCTGTTAACAAAAA AATCCCGTAGTCTAG ATTG CTAGACTACGGGACG TTCAATACACGTGTT TERM 1921 1561706 - 1561677 - H 100 -19.5 -5.7946 | opp_overlap 1561675 CTGTTAACAAAAAAA TCCCGTAGTCTAG ATTG CTAGACTACGGGA CGTTCAATACACGTG LCK_01481 1562150 - 1562479 + | Thiol-disulfide isomerase or thioredoxin TERM 1922 1562503 - 1562483 - T 90 -8.4 -4.86621 | opp_overlap 1562483 ACGTTGAATTAAAAA GACACATA TAGGC TATGTGTC TTTTTTTAGTTATAA TERM 1923 1562483 - 1562503 + T 93 -8.4 -5.68023 | opp_overlap 1562483 ACGTTGAATTAAAAA GACACATA TAGGC TATGTGTC TTTTTTTAGTTATAA LCK_01482 1562899 - 1562513 - | lactoylglutathione lyase fucP 1564252 - 1562921 - | L-fucose permease TERM 1924 1563999 - 1563981 - G 70 -9.6 -2.53822 | overlap 1563978 GTTACTTTATAAGAC GCTTTGCG AAT CACAAAGC TCGCTGGAATGGCTA TERM 1925 1564093 - 1564081 - G 80 -6.3 -4.75174 | overlap 1564073 CATTTAATTCAAAAA CAGTT TTG AACTG CGTAATTAAAATATC TERM 1926 1564290 - 1564275 - R 76 -7.6 -3.96148 | opp_overlap 1564287 CTCCTCTAGTAGAAA CAAGTG TTAT CACTTG TAAGCGTTTACAAGT TERM 1927 1564287 - 1564304 + r 78 -7.1 -4.30576 | opp_overlap 1564275 AAACAAGTGTTATCA CTTGTAA GCGT TTACAAG TTTTAATGATAGCAC TERM 1928 1564395 - 1564428 + r 100 -11.1 -4.70266 | opp_overlap 1564395 AAAAGTATCAAAAAA CACCATTACATCGAT AATT ATCGACGCAATGGTG TTTTTAACTCATATT TERM 1929 1564428 - 1564395 - R 100 -15.5 -5.25656 | opp_overlap 1564395 AAAAGTATCAAAAAA CACCATTACATCGAT AATT ATCGACGCAATGGTG TTTTTAACTCATATT LCK_01484 1565308 - 1564442 - | trypsin-like serine protease TERM 1930 1564809 - 1564834 + g 70 -2.5 -5.14163 | overlap 1564811 1564812 1564829 GTTTTAATTGCATCT GTCTTGGCTTT AATG AGAGCCAAATC TTTTTGTTGATCAGT kinF 1566643 - 1565360 - | Signal transduction histidine kinase rrp6 1567325 - 1566636 - | response regulator nicT 1568537 - 1567512 - | high-affinity nickel permease LCK_01488 1569361 - 1568567 - | putative translation factor (SUA5) leuD 1570061 - 1569477 - | 3-isopropylmalate dehydratase small subunit leuC 1571443 - 1570076 - | 3-isopropylmalate dehydratase large subunit leuB 1572510 - 1571440 - | 3-isopropylmalate dehydrogenase TERM 1931 1572432 - 1572407 - G 71 -6.1 -4.24606 | opp_overlap 1572414 1572416, overlap 1572408 AACTCATATTTAAAA GTAGAACCCGC CGTC GCGGCTTCTAA AACTGCCAGCCCTGC TERM 1932 1572431 - 1572408 - G 73 -9.6 -3.1404 | opp_overlap 1572414 1572416, overlap 1572407 ACTCATATTTAAAAG TAGAACCCGC CGTC GCGGCTTCTA AAACTGCCAGCCCTG LCK_01492 1573699 - 1572503 - | 2-isopropylmalate synthase TERM 1933 1572816 - 1572826 + g 84 -6.8 -4.89063 | GCAAACGCGTTACGC CCCA TGA TGGG TTTATTTTTAGCTAC TERM 1934 1573400 - 1573390 - G 81 -5.4 -5.06816 | ATGTGGCAATAAAAA CATG GAT CATG GGGTGCTTTGCCTGC TERM 1935 1573739 - 1573707 - R 100 -14.9 -5.1675 | opp_overlap 1573707 1573717 TTAGTCATCAAAAAA TCCCAAACCTGCCGT TAA ACGGCTTGTTTGGGA TTATCACATGTCCTC TERM 1936 1573707 - 1573739 + r 100 -14.9 -3.35438 | opp_overlap 1573707, overlap 1573717 TTAGTCATCAAAAAA TCCCAAACCTGCCGT TAA ACGGCTTGTTTGGGA TTATCACATGTCCTC TERM 1937 1573717 - 1573729 + r 85 -9.1 -3.97689 | opp_overlap 1573707, overlap 1573707 AAAAATCCCAAACCT GCCGT TAA ACGGC TTGTTTGGGATTATC LCK_01493 1574293 - 1573988 - | metal-sulfur cluster biosynthetic protein LCK_01494 1575724 - 1574294 - | ABC-type transport system involved in Fe-S cluster assembly, permease component TERM 1938 1574922 - 1574933 + g 76 -7.2 -4.14633 | TGAATGGTTGTATAT CGGC AATA GCCG TCTTTTTTAACAATC TERM 1939 1575377 - 1575387 + g 70 -5.4 -4.43208 | opp_overlap 1575377, overlap 1575373 TTCTGGCACACCCAA CCTT TCA AAGG TTTGTTTCAAAGTAT LCK_01495 1576169 - 1575729 - | NifU-like protein LCK_01496 1577380 - 1576166 - | selenocysteine lyase LCK_01497 1578536 - 1577370 - | ABC-type transport system involved in Fe-S cluster assembly, permease component LCK_01498 1579335 - 1578529 - | ABC-type transport system involved in Fe-S cluster assembly, ATPase component LCK_01499 1580177 - 1579332 - | transcriptional regulator TERM 1940 1579496 - 1579486 - G 88 -2.6 -5.96521 | opp_overlap 1579486 ATTAACCAAAAAAAA TTTT CTA AAAA TGCTGTTTGATCATA TERM 1941 1580225 - 1580197 - R 100 -14.8 -5.4505 | opp_overlap 1580197 TCTCCTAACAAAAAA GCATTCTAACTG CTGAT CAGTTAGAATGC TTTTCCCATCAACTA TERM 1942 1580197 - 1580225 + r 100 -14.8 -4.14243 | opp_overlap 1580197 TCTCCTAACAAAAAA GCATTCTAACTG CTGAT CAGTTAGAATGC TTTTCCCATCAACTA TERM 1943 1580309 - 1580284 - R 74 -9.1 -3.06073 | opp_overlap 1580285, overlap 1580283 GACAGTGCTCAAAAT GCCTACTCATT AGGA AATGAGTAGGT TGAGTTGCTTTTTCA TERM 1944 1580285 - 1580308 + r 91 -12.6 -3.3039 | opp_overlap 1580284 1580283 ACAGTGCTCAAAATG CCTACTCATT AGGA AATGAGTAGG TTGAGTTGCTTTTTC TERM 1945 1580426 - 1580450 + r 82 -4.3 -5.44119 | opp_overlap 1580433, overlap 1580427 1580433 ATGCAAATGTCAATA AAAAAAACGCA ATC TGCGTTTTTAC TTTTTTTGCCCTGCC TERM 1946 1580427 - 1580449 + r 73 -7.8 -3.85748 | opp_overlap 1580433, overlap 1580426 1580433 TGCAAATGTCAATAA AAAAAACGCA ATC TGCGTTTTTA CTTTTTTTGCCCTGC TERM 1947 1580433 - 1580443 + r 85 -6.8 -5.31158 | opp_overlap 1580433, overlap 1580427 1580426 TGTCAATAAAAAAAA CGCA ATC TGCG TTTTTACTTTTTTTG TERM 1948 1580443 - 1580433 - R 100 -6.8 -6.09888 | opp_overlap 1580433 1580427 1580426 TGTCAATAAAAAAAA CGCA ATC TGCG TTTTTACTTTTTTTG LCK_01500 1581745 - 1580447 - | superfamily II DNA/RNA helicase LCK_01501 1582751 - 1581753 - | dehydrogenase LCK_01502 1583488 - 1582748 - | Lyzozyme M1 (1,4-beta-N-acetylmuramidase) TERM 1949 1583076 - 1583060 - G 72 -9.5 -3.03792 | opp_overlap 1583059, overlap 1583059 ATTAGTTACATAAAT GGCAATT GGT AATTGCC CAATATTATTGCCAA pepS 1583659 - 1584888 + | leucyl aminopeptidase (aminopeptidase T) TERM 1950 1584928 - 1584896 - T 100 -18.7 -4.44667 | opp_overlap 1584896 1584901, overlap 1584901 GGGCCTAACAATAAA GAAAACCGCTCAATA ATA CATTGAGCGGTTTTC TTTTGTGCAAAGATT TERM 1951 1584896 - 1584928 + T 100 -18 -4.37658 | opp_overlap 1584896 1584901, overlap 1584901 GGGCCTAACAATAAA GAAAACCGCTCAAT AATAC ATTGAGCGGTTTTC TTTTGTGCAAAGATT TERM 1952 1584901 - 1584923 + T 100 -12.1 -5.18371 | opp_overlap 1584896 1584901, overlap 1584896 TAACAATAAAGAAAA CCGCTCAAT AATAC ATTGAGCGG TTTTCTTTTGTGCAA TERM 1953 1584923 - 1584901 - T 100 -12.8 -5.18297 | opp_overlap 1584901 1584896, overlap 1584896 TAACAATAAAGAAAA CCGCTCAATA ATA CATTGAGCGG TTTTCTTTTGTGCAA proC 1585709 - 1584942 - | pyrroline-5-carboxylate reductase LCK_01505 1586394 - 1585753 - | deoxynucleoside kinase dacB 1587222 - 1586464 - | D-alanyl-D-alanine carboxypeptidase TERM 1954 1586918 - 1586904 - G 72 -10 -2.57132 | opp_overlap 1586903 1586904, overlap 1586903 GCGTGGTGGCATAAC CTGCTC TTT GAGCAG CTTGTCGAAATGCTG TERM 1955 1586904 - 1586918 + g 72 -10 -2.58861 | opp_overlap 1586904 1586903, overlap 1586903 GCGTGGTGGCATAAC CTGCTC TTT GAGCAG CTTGTCGAAATGCTG TERM 1956 1587156 - 1587146 - G 74 -4 -5.02074 | GTAGGCTGCAAAAAA CTAA TAA TTAG TATGCCCACTACGAT TERM 1957 1587327 - 1587345 + r 90 -11.8 -3.39895 | opp_overlap 1587327 CGTGCATAAAAAAAA CCGATACA ATT TGTATCGG TTACTTAGTGGACAG TERM 1958 1587345 - 1587327 - R 100 -11.8 -5.93809 | opp_overlap 1587327 CGTGCATAAAAAAAA CCGATACA ATT TGTATCGG TTACTTAGTGGACAG LCK_01507 1587945 - 1587505 - | hypothetical protein LCK_01508 1588192 - 1587938 - | Cro/CI family transcriptional regulator TERM 1959 1588159 - 1588199 + g 84 -8 -4.77165 | gap 1, opp_overlap 1588165 1588184, overlap 1588158 1588156 ATGCCAACTCCTTAT GTAAAAGATATTTTACATA TATA TA-GTAAAACATCTTTTAC TTTTCTTGTCAAACC TERM 1960 1588242 - 1588223 - R 100 -10.8 -5.04868 | opp_overlap 1588223 1588226 TCAAACCAAATAAAA GAACAACC TAAT GGTTGTTC TTTCTGTTAGCAATT TERM 1961 1588223 - 1588242 + r 100 -10.8 -4.20025 | opp_overlap 1588223, overlap 1588226 TCAAACCAAATAAAA GAACAACC TAAT GGTTGTTC TTTCTGTTAGCAATT TERM 1962 1588226 - 1588239 + r 71 -6.7 -4.21773 | opp_overlap 1588223, overlap 1588223 AACCAAATAAAAGAA CAACC TAAT GGTTG TTCTTTCTGTTAGCA galE 1589249 - 1588257 - | UDP-glucose 4-epimerase TERM 1963 1588774 - 1588798 + g 70 -3 -5.1101 | gap 2, overlap 1588772 1588776 ACCCACTTCACGCCA TCA--GCTTGGT CAG ACCAAGCCATGA TTTTTTCCATCATCA TERM 1964 1589049 - 1589035 - G 78 -7.2 -4.45077 | opp_overlap 1589034 1589035 GAAAAAGCAGCAAAA TGAACA ACT TGTTCA ATATTTTCTTGTTCA fat 1590027 - 1589290 - | Acyl-ACP thioesterase LCK_01511 1590913 - 1590038 - | methyltransferase TERM 1965 1590515 - 1590497 - G 78 -2.5 -5.3658 | gap 1 ACCATAAAAATAAAA TGGTTGTG GCAC CA-AACCA CTTGCAATTAAAGCT TERM 1966 1590886 - 1590897 + g 89 -4.4 -5.5604 | overlap 1590892 ACGTGCCCGTCTCAT GCTT TTCA AAGC TTTTTTGTTGATTCA LCK_01512 1591850 - 1590915 - | ATPase involved in DNA replication TERM 1967 1591735 - 1591717 - G 83 -7.4 -4.67234 | AGCCAATGCGAAAAA GCCAGC TTAGTCT GCTGGC TCGGTCCAACAAATA LCK_01513 1592179 - 1591850 - | hypothetical protein tmk 1592830 - 1592186 - | thymidylate kinase TERM 1968 1592733 - 1592743 + g 70 -5.4 -4.4078 | GTCACAAGTTGATCA CCAA GTA TTGG TTTTAATTCAGACAC LCK_01515 1593137 - 1592877 - | hypothetical protein recR 1593739 - 1593134 - | recombination protein RecR dnaX 1595600 - 1593786 - | DNA polymerase III, gamma/tau subunit TERM 1969 1594625 - 1594635 + g 73 -6.8 -4.2535 | CACTCTGCATTGTCT GCAG CAA CTGC TTTTGAATATCATCT TERM 1970 1595697 - 1595683 - R 100 -9.2 -5.66684 | CAACTGACAAAAAAA GACCGC TAA GCGGCC AAATATGTACACAAG LCK_01518 1596329 - 1595811 - | HD superfamily hydrolase LCK_01519 1596903 - 1596394 - | cytosine/adenosine deaminase rsmC 1597522 - 1596881 - | 16S RNA G1207 methylase RsmC TERM 1971 1596962 - 1596974 + g 78 -2.7 -5.44721 | ACGAGCATTACCAAA TATGG TCA TCATA TTTTTTTGCGCTGAT TERM 1972 1597573 - 1597556 - R 85 -4.1 -5.64274 | TTATGTACAAAAAAA GAAGTAC CGAA GCACCTC TTTTAATATAACGGT rplL 1598023 - 1597658 - | ribosomal protein L7/L12 TERM 1973 1597821 - 1597849 + g 75 -9.7 -3.35996 | opp_overlap 1597820 1597819, overlap 1597825 ACTGCCTTGATAACC TTAACTTTAGCAG TAC CTGCTGAAGTCAA TTCTACGTCGAAGTC TERM 1974 1597825 - 1597845 + g 72 -10.5 -2.6063 | opp_overlap 1597820 1597819, overlap 1597821 CCTTGATAACCTTAA CTTTAGCAG TAC CTGCTGAAG TCAATTCTACGTCGA TERM 1975 1597992 - 1598008 + g 77 -8.7 -3.85817 | opp_overlap 1597973 1597994 GTTGCATCCTTCAAT GATGCGA TAA TCGCGTC TTTATCAAAAGCCAT rplJ 1598628 - 1598098 - | ribosomal protein L10 TERM 1976 1598347 - 1598368 + g 77 -9.5 -3.53012 | opp_overlap 1598346 CTTCTTCAAAATACG TGATGGTGC AACT GCATCATCA TTTGAGAAGGCCACG TERM 1977 1598551 - 1598563 + g 70 -7.7 -3.74526 | opp_overlap 1598550 1598551 AGCGTCAACAACAAC TGCTG AAG CAGCA TTCTTGAATTGATCA TERM 1978 1598695 - 1598670 - R 100 -10.5 -4.65263 | gap 1 ATTTTGCAAAAGAAA TCCCGTGCG-CT AAA AGACACACGGGA AAAGTTTTTAAACTT rplA 1599503 - 1598811 - | ribosomal protein L1 TERM 1979 1599329 - 1599311 - G 86 -9.6 -4.07885 | opp_overlap 1599311 1599314, overlap 1599314 TACCGTTTGGCAAAA CAACTGCG CCA CGCAATTG TTGATCAGCTTGACG rplK 1600033 - 1599503 - | 50S ribosomal protein L11 TERM 1980 1600019 - 1600035 + g 71 -9.5 -2.78526 | overlap 1600016 1600026 AAGTGCTGCTCCCAC GTATGTC GAT GACATAC TCGTCTATTATACAA nusG 1600714 - 1600079 - | transcription termination/antitermination factor NusG TERM 1981 1600780 - 1600763 - R 95 -8.5 -5.47159 | opp_overlap 1600766 TTGTAATATAAAAAA GAACTTC CACA GAAGTTC TCCTCGCTATAAACA secE 1600997 - 1600824 - | treprotein translocase, SecE subunit TERM 1982 1600939 - 1600956 + g 74 -4.1 -5.05505 | overlap 1600940 TTTGAGGCTTGATCT GGTGACA ACCA TGTCACA TTTTTCATTTCTGCT LCK_01527 1601800 - 1601210 - | transcriptional regulator LCK_01528 1603409 - 1601874 - | hypothetical protein TERM 1983 1602481 - 1602498 + g 70 -2.7 -5.08601 | overlap 1602483 TTGAAAACCATTAAT TGCGTTA GTGG TGACGTA TTTTTATTAGCATCA TERM 1984 1602512 - 1602529 + g 74 -4.2 -5.07011 | TATTTTTATTAGCAT CATTGT CACCAA ACAATG TTTTTAATTTATCTG LCK_01529 1604119 - 1603571 - | ribosome-associated protein Y (PSrp-1) LCK_01530 1604869 - 1604201 - | amidophosphoribosyltransferase TERM 1985 1604321 - 1604311 - G 76 -6.8 -4.36411 | CATCAATCAGCAAAA CGGA TTT TCCG CTTAAAGATGTATGG comFA 1606149 - 1604869 - | superfamily II DNA/RNA helicase TERM 1986 1605303 - 1605328 + g 81 -5.4 -5.00884 | opp_overlap 1605304, overlap 1605304 TTTGAAATTGACGTA ATTGCCGCAG CAGTTT CTGTGGCAAC TTTTTTCGCCAACGT TERM 1987 1605304 - 1605327 + g 74 -8.9 -3.60048 | opp_overlap 1605304, overlap 1605303 TTGAAATTGACGTAA TTGCCGCAG CAGTTT CTGTGGCAA CTTTTTTCGCCAACG TERM 1988 1605615 - 1605634 + g 82 -6.4 -4.91084 | opp_overlap 1605615, overlap 1605610 GTGTCGTGGCCAAAA CTAGCGCT GTAT AGCGATAG TTTTCTTCTTGCGTC yvyE 1606167 - 1606802 + | YvyE TERM 1989 1606925 - 1606904 - T 100 -13.1 -5.32882 | opp_overlap 1606904 GATCATTATAAAAAA CAGCACAGA TTAA TCTGTGCTG TTTTTGTTTGTTACT TERM 1990 1606904 - 1606925 + T 100 -13.1 -5.48514 | opp_overlap 1606904 GATCATTATAAAAAA CAGCACAGA TTAA TCTGTGCTG TTTTTGTTTGTTACT LCK_01533 1607877 - 1606939 - | phosphoglycerate dehydrogenase LCK_01534 1608842 - 1607874 - | ribokinase family sugar kinase LCK_01535 1610143 - 1608866 - | TRAP-type mannitol/chloroaromatic compound transport system, large permease component LCK_01536 1610895 - 1610140 - | glutamate synthase domain-containing 3 LCK_01537 1611164 - 1610907 - | hypothetical protein LCK_01539 1611277 - 1612266 + | transcriptional regulator ppx2 1613247 - 1612258 - | exopolyphosphatase TERM 1991 1612710 - 1612681 - G 72 -10.1 -2.62439 | overlap 1612680 AATATCGCCAAATAG CTGTCTCAAACCA ATAA TGGCCTGAAACAG TGCACGAGCCGACAC ppk 1615388 - 1613244 - | polyphosphate kinase ppx3 1616881 - 1615388 - | exopolyphosphatase TERM 1992 1616099 - 1616122 + g 80 -6 -4.68593 | overlap 1616102 GGTTAAAGCAAATGG TACGTCGTTG AAAT CAACGGCATA TTTTTCAATAATGGC TERM 1993 1616907 - 1616925 + r 71 -5.4 -4.56367 | ATTTTTATTTACACT TAGTTTAT CAC ATGAACTA TTTATTTATCCCCTA tag 1617533 - 1616946 - | 3-methyladenine DNA glycosylase TERM 1994 1617758 - 1617741 - R 100 -8.5 -6.13 | opp_overlap 1617741 ATATGTAAAAAAAAA TCATACC CAAA GGTATGA TTTCGGCATTAAATT TERM 1995 1617741 - 1617758 + r 77 -8.5 -3.61536 | opp_overlap 1617741 ATATGTAAAAAAAAA TCATACC CAAA GGTATGA TTTCGGCATTAAATT eno 1619100 - 1617775 - | enolase LCK_01544 1619750 - 1619190 - | DNA-directed RNA polymerase specialized sigma subunit trmH 1620531 - 1619770 - | rRNA methylase LCK_01546 1620935 - 1620528 - | ribonuclease III TERM 1996 1621110 - 1621087 - R 100 -7.4 -6.07627 | opp_overlap 1621087 ATTGTTAAAAAAAAA CCAGCCACAT ATAA AAGTGACTGG TTTTTTAATATTTAA TERM 1997 1621087 - 1621110 + r 82 -5.2 -5.32699 | opp_overlap 1621087 ATTGTTAAAAAAAAA CCAGCCACAT ATAA AAGTGACTGG TTTTTTAATATTTAA rpoC 1624807 - 1621145 - | DNA-directed RNA polymerase beta' chain TERM 1998 1623024 - 1623003 - G 73 -9.5 -3.17608 | opp_overlap 1623002 1623003, overlap 1622991 AAATAGTCATGAATA TCTTCACCG GGTT CGATGAAGA ATTGATCACTAATAC TERM 1999 1623223 - 1623234 + g 74 -4.4 -4.99435 | opp_overlap 1623231, overlap 1623231 AATGGACTACCTTAC TTGC AAAG GCAA TTTTTGCTTCTTCAA TERM 2000 1624905 - 1624876 - R 70 -8.1 -3.29144 | opp_overlap 1624876 GCACGTTTGCTATAA GTTACTCTTAATC ACGC GATTAAAAATAAC TTATAACAAACGTGC rpoB 1628563 - 1624949 - | DNA-dependent RNA polymerase subunit beta TERM 2001 1625182 - 1625158 - G 73 -9.4 -3.20164 | opp_overlap 1625148 GCATATCCAAGCCAA GTGCTTGCAA TTCTT TTACAAGCAC ACGGAATGATTCAGG TERM 2002 1627447 - 1627467 + g 70 -2.6 -5.06103 | TTTCATCAATGTGCC CATTACCA ATTAA TAGTAATG TTTTTTCAGGATTCT TERM 2003 1628526 - 1628543 + g 79 -9.9 -3.7829 | GCATATGAACGACGG GTACGGT GCTT ACCGTAC TTTACTAAATGTCCT TERM 2004 1628695 - 1628663 - R 80 -2.7 -5.65177 | gap 1, opp_overlap 1628671 1628681 ATAGGCACAAAAAAA GCAATCGCCG-CTG TTTCCG CAGACAACGTTTGC TTCAATATAAAGGCA tpiA 1629611 - 1628799 - | triosephosphate isomerase LCK_01551 1629955 - 1629614 - | hypothetical protein TERM 2005 1630048 - 1630018 - H 100 -16.3 -4.67038 | opp_overlap 1630018 CTTTTAAAAGTAAAA GGCACCTCCCATT TTAGT AATGGGAAGTGCC TTGATTATGCAGCCG TERM 2006 1630018 - 1630048 + H 100 -14.1 -3.44146 | opp_overlap 1630018 CTTTTAAAAGTAAAA GGCACCTCCCATT TTAGT AATGGGAAGTGCC TTGATTATGCAGCCG TERM 2007 1630457 - 1630438 - g 71 -6.4 -4.14392 | GTTTAACGGCGAAAA GGGTTACG GTTT CGTAACTC GCGAAAACGGTGAAG LCK_01552 1630400 - 1630600 + | cold shock protein TERM 2008 1630638 - 1630625 - f 81 -8.1 -4.13014 | opp_overlap 1630625 CTGATACTTTCAAAA CTCGC TTAG GCGAG TTTTTTTGTGTCGAA TERM 2009 1630625 - 1630638 + F 93 -8.1 -5.71712 | opp_overlap 1630625 CTGATACTTTCAAAA CTCGC TTAG GCGAG TTTTTTTGTGTCGAA TERM 2010 1631350 - 1631367 + G 79 -9.9 -3.72363 | opp_overlap 1631347 1631348 TAAATGTTGAAATTG CCAATGG CCAA CCATTGG TTTACGATTTAGCTG gpm 1630710 - 1631423 + | phosphoglycerate mutase-like protein TERM 2011 1631430 - 1631455 + F 100 -10.5 -5.40625 | opp_overlap 1631430 AGCAAGTAATAAAAA GCCAACACACT AATC AATGTGTTGGC TTTTTTATGTCGTCT TERM 2012 1631455 - 1631430 - f 100 -12.7 -5.20534 | opp_overlap 1631430 AGCAAGTAATAAAAA GCCAACACACT AATC AATGTGTTGGC TTTTTTATGTCGTCT TERM 2013 1631515 - 1631484 - f 100 -17.6 -4.81852 | opp_overlap 1631489, overlap 1631489 CTACAATTAAGAAAA TAAAAGACCAACCA CAAA TGGTTGGTCTTTTA AAATTGCCCCTGCTG TERM 2014 1631489 - 1631510 + F 100 -13.1 -4.19238 | opp_overlap 1631484 1631489 ATTAAGAAAATAAAA GACCAACCA CAAA TGGTTGGTC TTTTAAAATTGCCCC TERM 2015 1631510 - 1631489 - f 100 -13.1 -5.28831 | opp_overlap 1631489, overlap 1631484 ATTAAGAAAATAAAA GACCAACCA CAAA TGGTTGGTC TTTTAAAATTGCCCC LCK_01554 1631899 - 1632567 + | membrane-associated phospholipid phosphatase TERM 2016 1632576 - 1632599 + T 100 -10.4 -4.82667 | opp_overlap 1632576 AATTTAATTTAAAAA GGACATGATG TTAT TATCATGTCC TTTTTCATATCATAG TERM 2017 1632599 - 1632576 - T 100 -9.7 -4.75776 | opp_overlap 1632576 AATTTAATTTAAAAA GGACATGAT GTTATT ATCATGTCC TTTTTCATATCATAG nrdF 1633601 - 1632627 - | ribonucleotide reductase, beta subunit nrdI 1634035 - 1633604 - | nrdI protein TERM 2018 1633789 - 1633805 + g 73 -9.5 -3.21276 | overlap 1633788 TTAAATAACGTCGAT TATTGCC AAA GGCAATA TATTCTCCCAGCGCA nrdE 1636296 - 1634125 - | ribonucleotide reductase, alpha subunit TERM 2019 1634647 - 1634672 + g 85 -9.1 -4.13945 | overlap 1634643 1634642 TGGCAGATGGTGTGG CGCAAAAGCTT GCGC AACCTTTTGCG TTTTAGGCTGCCAAT TERM 2020 1636361 - 1636342 - R 90 -3.6 -5.95539 | opp_overlap 1636342 TGGCAAATAAAAAAA CATCGA TTGGTCGC TCGATG TTATCAATCACTTTA nrdH 1636610 - 1636380 - | glutaredoxin TERM 2021 1636835 - 1636825 - H 70 -8.2 -3.26649 | opp_overlap 1636824 1636825 ACATTGCCATATCAA GCGC TTA GCGC ATTTGTTCACAAATG LCK_01559 1637114 - 1638502 + | hemolysin TERM 2022 1638505 - 1638516 + F 95 -2.2 -6.58542 | TGCCACGAACTAAAA CCAT AAAT GTGG TTTTTTTTTTTACAA pgm4 1638632 - 1639297 + | phosphoglycerate mutase TERM 2023 1639406 - 1639416 + F 70 -4 -5.01546 | opp_overlap 1639406, overlap 1639395 1639394 TTCCGCATATCAAAA TAGA TTG TCTA TTTTTGTGTGCATTT LCK_01561 1639513 - 1640811 + | GTPase TERM 2024 1640820 - 1640838 + T 86 -5.3 -5.61596 | opp_overlap 1640820 1640823 TATTTGATTAAAAAA CATCAAC TTTTT GTTGGTG TTTTTTTATCGGGAT TERM 2025 1640838 - 1640820 - T 71 -3.1 -5.15634 | opp_overlap 1640820, overlap 1640823 TATTTGATTAAAAAA CATCAAC TTTTT GTTGGTG TTTTTTTATCGGGAT TERM 2026 1640979 - 1641006 + T 75 -10 -2.59267 | opp_overlap 1640979, overlap 1640978 1640981 ATCGCCACAAAAAAA CACCATCTACTA TCGT TAATAGATGGTG CTTGATATAGTTCCC TERM 2027 1641006 - 1640979 - T 100 -12.2 -5.61596 | opp_overlap 1640979 1640978 1640981 ATCGCCACAAAAAAA CACCATCTACTA TCGT TAATAGATGGTG CTTGATATAGTTCCC rpsI 1641440 - 1641045 - | ribosomal protein S9 rplM 1641902 - 1641459 - | ribosomal protein L13 TERM 2028 1641753 - 1641777 + g 84 -10.1 -3.9461 | opp_overlap 1641737, overlap 1641735 1641734 TACATGGTCACCCAT GTCAACGTTTG GTG TAAACGTTGGC TTGTTCTTACCACGC truA 1642849 - 1642067 - | tRNA pseudouridine synthase A LCK_01565 1643691 - 1642885 - | ABC-type cobalt transport system, permease component CbiQ LCK_01566 1644541 - 1643684 - | ABC-type cobalt transport system, ATPase component LCK_01567 1645338 - 1644517 - | ABC-type cobalt transport system, ATPase component TERM 2029 1646486 - 1646474 - g 77 -7.7 -4.26344 | ATATGTTGATGAAAA GACAG GCC CTGTC CCACAAACCGTAGAA ndh 1645527 - 1647197 + | NADH dehydrogenase, FAD-containing subunit LCK_01569 1647298 - 1648296 + | geranylgeranyl pyrophosphate synthase TERM 2030 1648313 - 1648339 + T 100 -12.5 -4.7173 | opp_overlap 1648313 AGAACATATAAAAAA TCCTTGAAGTT TTTAT AACTTCAAGGA TTTTTAGATGTGATG TERM 2031 1648339 - 1648313 - T 100 -12.5 -5.48787 | opp_overlap 1648313 AGAACATATAAAAAA TCCTTGAAGTT TTTAT AACTTCAAGGA TTTTTAGATGTGATG rplQ 1648745 - 1648362 - | ribosomal protein L17 TERM 2032 1648551 - 1648529 - G 70 -8.4 -3.28712 | overlap 1648530 1648538 CGCCGTCTTCGATAA CGTCAGCAAC TTC GTTGCGGACA AAGGCAGCAGCTTGA TERM 2033 1648550 - 1648530 - G 70 -9.7 -2.57132 | overlap 1648529 1648538 GCCGTCTTCGATAAC GTCAGCAAC TTC GTTGCGGAC AAAGGCAGCAGCTTG rpoA 1649727 - 1648783 - | DNA-directed RNA polymerase alpha chain rpsK 1650160 - 1649774 - | ribosomal protein S11 TERM 2034 1650301 - 1650274 - R 72 -8 -3.35616 | gap 1, opp_overlap 1650282, overlap 1650272 1650282 GATTAGGATACAACA GAAAAAGATAATC TTA GATTA-CTTTTTC TTGCCAGCAATTGCC rpsM 1650663 - 1650292 - | ribosomal protein S13 infA 1651126 - 1650911 - | translation initiation factor IF-1 TERM 2035 1651022 - 1650991 - G 75 -10.4 -3.03441 | GATCACCTGGCAAGA TTCGAATAAAATTC TTAC GAATTTTACCCGAA ACGTGTGCCAAAATT TERM 2036 1651077 - 1651099 + g 72 -9.3 -3.29324 | overlap 1651077 TGGAACATCGCATTT GGTAAAGTT TCTTT AACTTTACC TTCAATTTCGATGAC adk 1651795 - 1651232 - | adenylate kinase secY 1653122 - 1651788 - | preprotein translocase subunit SecY rplO 1653556 - 1653122 - | ribosomal protein L15 rpmD 1653768 - 1653586 - | ribosomal protein L30 rpsE 1654286 - 1653780 - | ribosomal protein S5 rplR 1654660 - 1654307 - | ribosomal protein L18 rplF 1655280 - 1654744 - | ribosomal protein L6P/L9E rpsH 1655703 - 1655305 - | ribosomal protein S8 TERM 2037 1655745 - 1655803 + r 100 -14.2 -4.14633 | opp_overlap 1655746 1655796 1655797 1655798, overlap 1655746 AACGGACATAATGAA ATGACACGCTCTTAACTATTATAGACTA TTT TGGTCTATAACAGTTAAAAACGTGTCAC TCTTTTTTAAGAGTA TERM 2038 1655746 - 1655802 + r 100 -17.7 -3.08056 | opp_overlap 1655746 1655796 1655797 1655798, overlap 1655745 ACGGACATAATGAAA TGACACGCTCTTAACTATTATAGACTA TTT TGGTCTATAACAGTTAAAAACGTGTCA CTCTTTTTTAAGAGT TERM 2039 1655802 - 1655746 - R 100 -22.1 -4.04576 | opp_overlap 1655746 1655745, overlap 1655796 1655797 1655798 ACGGACATAATGAAA TGACACGCTCTTAACTATTATAGACTA TTT TGGTCTATAACAGTTAAAAACGTGTCA CTCTTTTTTAAGAGT TERM 2040 1655823 - 1655796 - R 70 -4.2 -4.76312 | opp_overlap 1655746 1655745, overlap 1655746 1655797 1655798 TATAACAGTTAAAAA CGTGTCACTCTT TTTT AAGAGTAACAAA CGTTTTTAAAATGCC rplE 1656384 - 1655842 - | ribosomal protein L5 rplX 1656716 - 1656408 - | ribosomal protein L24 rplN 1657108 - 1656740 - | ribosomal protein L14 rpsQ 1657427 - 1657161 - | ribosomal protein S17 rpmC 1657656 - 1657450 - | ribosomal protein L29 rplP 1658069 - 1657656 - | ribosomal protein L16 rpsC 1658755 - 1658084 - | ribosomal protein S3 rplV 1659111 - 1658755 - | ribosomal protein L22 rpsS 1659409 - 1659128 - | ribosomal protein S19 TERM 2041 1659372 - 1659389 + g 76 -4.7 -5.0538 | TTCTTAAGCAAGTGT GGGTCCG CAAA TGGTCCC TTTTTTAAACTACGA rplB 1660259 - 1659426 - | ribosomal protein L2 rplW 1660569 - 1660282 - | ribosomal protein L23 rplD 1661192 - 1660569 - | 50S ribosomal protein L4 rplC 1661908 - 1661225 - | ribosomal protein L3 TERM 2042 1661524 - 1661506 - G 72 -10.2 -2.61264 | opp_overlap 1661504 1661506, overlap 1661505 GGTGGTAGCGAGAAC CGTGGGCC ATA GGACCACG TGATTGTCCAAGCTT TERM 2043 1661506 - 1661524 + g 73 -10.2 -2.83119 | opp_overlap 1661506 1661505, overlap 1661504 GGTGGTAGCGAGAAC CGTGGGCC ATA GGACCACG TGATTGTCCAAGCTT rpsJ 1662285 - 1661977 - | ribosomal protein S10 TERM 2044 1662564 - 1662547 - R 95 -2.7 -6.36459 | opp_overlap 1662547 1662552, overlap 1662552 GGCAATAAAAAAAAA CCAATCA ATCA TCATTGG TTTTTTAAGGTTATC potD 1663654 - 1662575 - | spermidine/putrescine-binding periplasmic protein potC 1664483 - 1663656 - | ABC-type spermidine/putrescine transport system, permease component II potB 1665318 - 1664488 - | ABC-type spermidine/putrescine transport system, permease component I potA 1666486 - 1665302 - | ABC-type spermidine/putrescine transport system, ATPase component TERM 2045 1666448 - 1666503 + g 89 -5.8 -5.3689 | gap 1, opp_overlap 1666448 1666450 1666459 1666464, overlap 1666497 TTTAGTCAATAGATA TATTGTAACAAGAAAAGCATGCCAC TTCACGC GTGACATGCTTTT-TTCTCACAATA TTTTATTTTGTTTCT TERM 2046 1666503 - 1666448 - G 75 -10.2 -3.11072 | gap 1, opp_overlap 1666448 1666497, overlap 1666450 1666459 1666464 TTTAGTCAATAGATA TATTGTAACAAGAAAAGCATGCCAC TTCACGC GTGACATGCTTTT-TTCTCACAATA TTTTATTTTGTTTCT TERM 2047 1666493 - 1666459 - G 70 -8 -3.67558 | opp_overlap 1666448, overlap 1666450 1666448 1666464 GATATATTGTAACAA GAAAAGCATGCCAC TTCACGC GTGACATGCTTTTT TCTCACAATATTTTA TERM 2048 1666488 - 1666464 - G 86 -7.9 -4.90079 | opp_overlap 1666448, overlap 1666459 1666450 1666448 ATTGTAACAAGAAAA GCATGCCAC TTCACGC GTGACATGC TTTTTTCTCACAATA LCK_01601 1667686 - 1666496 - | cyanate permease TERM 2049 1666582 - 1666564 - G 76 -8.9 -3.66055 | overlap 1666562 1666567 TAAATAAGAACAATA CAACCAC TAATT GTGGTTG CCAACTCTTAAACCA TERM 2050 1667715 - 1667742 + r 87 -9.8 -3.96327 | opp_overlap 1667715 ATACTTAAAATAAAA CGGCACCACTCT GAGT AGAGTGACGCCG TTTATACTGAACCAT TERM 2051 1667742 - 1667715 - R 100 -14.2 -5.11836 | opp_overlap 1667715 ATACTTAAAATAAAA CGGCACCACTCT GAGT AGAGTGACGCCG TTTATACTGAACCAT fusA 1669906 - 1667795 - | translation elongation factor G TERM 2052 1669288 - 1669298 + g 71 -6.8 -4.08216 | CCGCAGGAATTTCAC GTGG TTC CCAC TTTTCACCCAAATCA TERM 2053 1669518 - 1669534 + g 70 -9.5 -2.70932 | GTCGTTGCCTGACGC CAAACTG TTT CAGTTTG TGGTTCAACACCAGC TERM 2054 1669714 - 1669733 + g 71 -4.2 -4.91084 | TTGTGGCAGCTGATT GGATTGTG ATTC CACGTTCC TTTTCTTGTTCCATG TERM 2055 1669756 - 1669785 + g 73 -5.8 -4.54477 | opp_overlap 1669756, overlap 1669778 GTTCCATGAAATCCA TTTGTGAAGCAC CATCGT GTGTTTCACCAA TTTTGTGAATTTTAC TERM 2056 1669947 - 1669967 + r 77 -6.2 -4.77036 | gap 1, opp_overlap 1669947 TATATGCAACAAAAA GCG-ACACA GAAT TGTGTTCGC TTTTTGATGGTAAAA TERM 2057 1669967 - 1669947 - R 83 -6.2 -5.12068 | gap 1, opp_overlap 1669947 TATATGCAACAAAAA GCG-ACACA GAAT TGTGTTCGC TTTTTGATGGTAAAA rpsG 1670577 - 1670107 - | ribosomal protein S7 rpsL 1671006 - 1670593 - | ribosomal protein S12 TERM 2058 1670862 - 1670878 + g 70 -5.8 -4.46212 | opp_overlap 1670861 1670873 TCATTGTACCAACAC GTGTGG CAACA CCACGC TTTTGTGGTGCAACG pppA 1671270 - 1671947 + | Signal peptidase, cleaves prepilin-like proteins TERM 2059 1671924 - 1671951 + T 100 -12.9 -4.24404 | opp_overlap 1671924 AATCTCGGTGAAAAA GCCATCACTTA TTTTGT TAAGTGATGGC TTTTAAGCTTTAGCT TERM 2060 1671951 - 1671924 - T 100 -12.9 -4.57341 | opp_overlap 1671924 AATCTCGGTGAAAAA GCCATCACTTA TTTTGT TAAGTGATGGC TTTTAAGCTTTAGCT clpC 1674419 - 1671954 - | ATPase with chaperone activity, ATP-binding subunit TERM 2061 1673139 - 1673157 + g 70 -3 -5.10461 | overlap 1673143 TTTAGCCGCAACTGT CTCAGCCA ATT TGGCTTTG TTTTTATTCACTGGG TERM 2062 1673143 - 1673153 + g 85 -6.8 -5.05606 | overlap 1673139 GCCGCAACTGTCTCA GCCA ATT TGGC TTTGTTTTTATTCAC TERM 2063 1674540 - 1674520 - R 100 -10.5 -4.78149 | opp_overlap 1674520 1674519 TTGATAATGGAAAAA GCCGAAACA TAT TGTTTCGAC CTTAATTTGGATTTT prfB 1675660 - 1674542 - | peptide chain release factor 2 TERM 2064 1675701 - 1675684 - R 77 -4.8 -5.07652 | opp_overlap 1675684 CCTCTCAAAATAAAA GCGAAC ACTTTG GCTCGC TCCTGTTATTGCATT secA 1678152 - 1675738 - | preprotein translocase, SecA subunit TERM 2065 1676145 - 1676158 + g 73 -2.3 -5.24003 | TGATTTGTTGTAACT GCCAT TCTG AAGGC TTTTTACTTTTTGTT TERM 2066 1676555 - 1676571 + g 72 -8.7 -3.49475 | opp_overlap 1676553 1676555 AATTGATTATCAATA CGTCGTG ACT CATGACG TTCTGTAGCAATAAC TERM 2067 1677762 - 1677788 + g 70 -3.6 -4.8622 | opp_overlap 1677764 1677766, overlap 1677764 CTGTTAGCGCGTTCA AATAGACCGCCA TAG TGGCCGTCAATG TTTTTCCTTCACCCG TERM 2068 1677784 - 1677766 - G 70 -8.8 -3.34715 | opp_overlap 1677764 1677762, overlap 1677764 TAGCGCGTTCAAATA GACCGCCA TAG TGGCCGTC AATGTTTTTCCTTCA TERM 2069 1678162 - 1678185 + r 82 -9 -4.01888 | gap 1, opp_overlap 1678166 TGCCATTATTTTTAG CACACAACGCT AGT AG-GTTGTGTG TTTCTCCTCTGAAAT serS 1679592 - 1678282 - | seryl-tRNA synthetase TERM 2070 1679671 - 1679628 - R 83 -6 -5.02502 | gap 1, overlap 1679622 TATAGTATACAAAAA CGCGTTTCC-CCTCTAAACCT TGT AGGAATAGGGACGAAAACGCG CTTCCGTGGTACCAC TERM 2071 1679898 - 1679919 + r 93 -11.7 -3.96624 | opp_overlap 1679898 AAGGCAAACAAAAAA GGATGTTTC CATT GAAACATCC TTTATCATGGGCCTG TERM 2072 1679919 - 1679898 - R 100 -11.7 -5.67283 | opp_overlap 1679898 AAGGCAAACAAAAAA GGATGTTTC CATT GAAACATCC TTTATCATGGGCCTG TERM 2073 1680843 - 1680822 - R 86 -5.9 -5.58209 | opp_overlap 1680824 TTAAACTTAAAAAAA GAGTTTGAA TTCC TTCAACCTC TATGCACCTAGCAGG TERM 2074 1684621 - 1684636 + r 77 -6.2 -4.65219 | opp_overlap 1684620 ACCTGCGATTAAACC GTTCTT TTTA AAGAAC TTCTTTTTGTGTTGT TERM 2075 1684780 - 1684796 + r 81 -10.9 -2.62616 | TCGAACCGCTGACCC CCTGCTT GCA AAGCAGG TGCTCTCCCAGCTGA TERM 2076 1684952 - 1684971 + r 72 -9.2 -2.65808 | opp_overlap 1684943 1684940, overlap 1684949 1684949 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 2077 1687069 - 1687023 - R 100 -15.6 -2.71011 | opp_overlap 1687036, overlap 1687036 ATTCGCTTTTAATCA TTACAATAAAAAAGTAGCAACT AAA AGTTGCTACTTTTTTATTTTAT GCGTGATGCCATCTT TERM 2078 1687036 - 1687056 + r 100 -12.7 -5.86976 | opp_overlap 1687023 1687036 CATTACAATAAAAAA GTAGCAACT AAA AGTTGCTAC TTTTTTATTTTATGC TERM 2079 1687056 - 1687036 - R 100 -12.7 -5.58179 | opp_overlap 1687036, overlap 1687023 CATTACAATAAAAAA GTAGCAACT AAA AGTTGCTAC TTTTTTATTTTATGC cysS 1688475 - 1687066 - | cysteinyl-tRNA synthetase TERM 2080 1687169 - 1687186 + g 72 -8.4 -3.49475 | opp_overlap 1687161 1687168 TTAAAATCACGAACT GCGCGT GCTTGG ACGCGC TTATCTAAAAGTGCC TERM 2081 1688583 - 1688602 + r 100 -10.8 -5.87996 | opp_overlap 1688583 TATTAAAATAAAAAA CAGTTTCC TATA GGAAACTG TTTTTTTATTGCTTA TERM 2082 1688602 - 1688583 - R 100 -10.8 -5.83211 | opp_overlap 1688583 TATTAAAATAAAAAA CAGTTTCC TATA GGAAACTG TTTTTTTATTGCTTA pgk 1689832 - 1688615 - | 3-phosphoglycerate kinase LCK_01612 1690746 - 1689913 - | glycosyltransferase LCK_01613 1692179 - 1690743 - | glycosyltransferase TERM 2083 1691315 - 1691297 - G 73 -10.2 -2.78996 | opp_overlap 1691290, overlap 1691296 CATCCCCAGGCAAAT GGCGTGCC TTT GGCACGCG GTCAACACCACCAAC TERM 2084 1692301 - 1692258 - R 84 -12.1 -2.84634 | gap 1, opp_overlap 1692266, overlap 1692261 1692266 GTTGACATTATCATA GCATAAAAGCGATAACCTCT AAATA AGAAGTCATCGCTTTTAT-C AGTCTTGAACATTAC TERM 2085 1692299 - 1692261 - R 95 -14.9 -2.67992 | opp_overlap 1692266, overlap 1692258 1692266 GACATTATCATAGCA TAAAAGCGATAACCTCT AAATA AGAAGTCATCGCTTTTA TCAGTCTTGAACATT TERM 2086 1692266 - 1692294 + r 74 -6 -4.4727 | opp_overlap 1692261 1692258 1692266 TATCATAGCATAAAA GCGATAACCTCT AAATA AGAAGTCATCGC TTTTATCAGTCTTGA TERM 2087 1692294 - 1692266 - R 100 -10.4 -4.52047 | opp_overlap 1692266, overlap 1692261 1692258 TATCATAGCATAAAA GCGATAACCTCT AAATA AGAAGTCATCGC TTTTATCAGTCTTGA TERM 2088 1692317 - 1692332 + r 83 -4.8 -5.57054 | AGTCTTGAACATTAC TTTTGA TTAT TCAAAA TTTTTTTAACTTGTT LCK_01614 1692993 - 1692313 - | molecular chaperone TERM 2089 1692774 - 1692800 + g 76 -4.4 -5.04249 | opp_overlap 1692774 GTAAAACACCAAAAG TTTGTTCAGCGG GGC CAGCAGAATAAA TTTCTTTTTTGACAG LCK_01615 1694497 - 1692995 - | major facilitator superfamily permease TERM 2090 1694576 - 1694616 + r 82 -4.1 -5.56673 | opp_overlap 1694583, overlap 1694577 1694583 1694613 CAATATGATACGCTT AACAAAATAGATTGTCAAC AAA GTTGACAATCTATTATAAA TTTTTTATTGTGACT TERM 2091 1694577 - 1694615 + r 76 -7.6 -3.92377 | opp_overlap 1694583, overlap 1694576 1694583 1694613 AATATGATACGCTTA ACAAAATAGATTGTCAAC AAA GTTGACAATCTATTATAA ATTTTTTATTGTGAC TERM 2092 1694583 - 1694609 + r 100 -15.4 -3.60344 | opp_overlap 1694583, overlap 1694577 1694576 ATACGCTTAACAAAA TAGATTGTCAAC AAA GTTGACAATCTA TTATAAATTTTTTAT TERM 2093 1694609 - 1694583 - R 100 -15.4 -4.65078 | opp_overlap 1694583 1694577 1694576 ATACGCTTAACAAAA TAGATTGTCAAC AAA GTTGACAATCTA TTATAAATTTTTTAT coaA 1695290 - 1694610 - | panthothenate kinase TERM 2094 1694804 - 1694821 + g 72 -9.9 -3.0558 | overlap 1694800 1694806 GCCAAGACGTTGGAT CAGCCTT GGCT AAGGCTG TCATTTCTAATGTCC LCK_01617 1697653 - 1695287 - | superfamily I DNA/RNA helicase TERM 2095 1696054 - 1696069 + g 82 -6.2 -4.88293 | GATATAGTGTTGTGT CAGTTA GCGA TAACTG TTTATTTTTCAAATT TERM 2096 1696231 - 1696206 - G 81 -5.4 -5.1615 | overlap 1696207 1696210 TTAATATTTAAAAAA CTACCGCGTC TGATTT GACGCGCTAA CGGTTTCAGTGCTTG TERM 2097 1697574 - 1697588 + g 71 -6.4 -4.22346 | TTGATCTCAGCTGCT GTCGTT TTA AGCGAC TTTTCCATAGCTTTC TERM 2098 1697754 - 1697722 - R 100 -17.3 -5.5208 | GTAGAATACAAAAAA GTGAGCAGTTTATCT CAA AAATAAACTGCTCAC CCGCACAATATAAAA TERM 2099 1697790 - 1697771 - R 100 -10 -5.1523 | opp_overlap 1697771 CGCACAATATAAAAA GCCGCAAC CGAA GTTGCGAC TTGATATAGCTCGTG LCK_01618 1699234 - 1697999 - | NADH:flavin oxidoreductase TERM 2100 1698225 - 1698237 + g 83 -6.3 -5.00884 | CGAATACTTTTTTCA TCGTT TGC AACGA TTTTTTCGACCCAGT LCK_01619 1700183 - 1699269 - | hypothetical protein TERM 2101 1700089 - 1700111 + g 73 -7.8 -3.79295 | overlap 1700077 1700088 CGCGAAATGTTGGCT TCCGTCAA TATCTCT TTGACGGA TATATTTTTTTCATG TERM 2102 1700217 - 1700201 - R 73 -4.5 -5.00616 | opp_overlap 1700201 1700202, overlap 1700202 TTGCCCCCTAAAAAA CTGTTAT CAC ATAACAA TTATTATAAGTATAC TERM 2103 1700303 - 1700286 - R 100 -9.9 -5.86465 | opp_overlap 1700286 AATAACACAAAAAAA GAGCTAC GATT GTAGCTC TTTTAATACAATAGT TERM 2104 1700286 - 1700303 + r 93 -9.9 -4.2717 | opp_overlap 1700286 AATAACACAAAAAAA GAGCTAC GATT GTAGCTC TTTTAATACAATAGT LCK_01620 1700928 - 1700329 - | hypothetical protein TERM 2105 1701046 - 1701091 + r 93 -10.3 -3.95042 | gap 1, overlap 1701047 AGTTATATTACGGTC TGTTATTTATTAAACATA-ATA GTA TATATATGTTTAATAAATAACC TTTAATTGCAGTTTT TERM 2106 1701047 - 1701090 + r 89 -13.8 -2.95941 | gap 1, overlap 1701046 GTTATATTACGGTCT GTTATTTATTAAACATA-ATA GTA TATATATGTTTAATAAATAAC CTTTAATTGCAGTTT LCK_01621 1702584 - 1701079 - | phosphatase TERM 2107 1702620 - 1702603 - R 93 -7 -5.40072 | TTTCTCCTAAAAAAA GACGAC CTAACT GTCGTC CCCTTAATATTTAAC phnE 1703440 - 1702631 - | phosphonate ABC transporter permease TERM 2108 1703394 - 1703404 + g 71 -6.8 -4.00042 | ACAGCATATTGTAGA CCAC GCC GTGG TTCTTTACTGAGAAC phnB 1704273 - 1703452 - | phosphonate ABC transporter permease phnC 1705019 - 1704273 - | phosphonates import ATP-binding protein phnC TERM 2109 1705063 - 1705102 + r 79 -9.3 -3.48506 | opp_overlap 1705068 1705073, overlap 1705065 1705068 1705073 CCCTTATGGCCTTAA CGCAAGAAAAGCGGCGC TTGTAT GCGCTGCTTTTCTGGTA TATTTAGTAAATTAT TERM 2110 1705065 - 1705100 + r 95 -14.1 -3.3082 | opp_overlap 1705068 1705073, overlap 1705063 1705068 1705073 CTTATGGCCTTAACG CAAGAAAAGCGGCGC TTGTAT GCGCTGCTTTTCTGG TATATTTAGTAAATT TERM 2111 1705068 - 1705097 + r 93 -14.4 -2.82279 | opp_overlap 1705068 1705073, overlap 1705065 1705063 1705073 ATGGCCTTAACGCAA GAAAAGCGGCGC TTGTAT GCGCTGCTTTTC TGGTATATTTAGTAA TERM 2112 1705097 - 1705068 - R 89 -12.2 -3.17194 | opp_overlap 1705068 1705065 1705063 1705073, overlap 1705073 ATGGCCTTAACGCAA GAAAAGCGGCGC TTGTAT GCGCTGCTTTTC TGGTATATTTAGTAA TERM 2113 1705092 - 1705073 - R 80 -6.3 -4.72029 | opp_overlap 1705073 1705068 1705065 1705063, overlap 1705068 CTTAACGCAAGAAAA GCGGCGC TTGTAT GCGCTGC TTTTCTGGTATATTT TERM 2114 1705073 - 1705092 + r 89 -8.5 -4.55673 | opp_overlap 1705068 1705073, overlap 1705068 1705065 1705063 CTTAACGCAAGAAAA GCGGCGC TTGTAT GCGCTGC TTTTCTGGTATATTT LCK_01625 1706186 - 1705140 - | putative phosphate phosphonate-binding protein TERM 2115 1706470 - 1706488 + r 87 -9.6 -4.06055 | opp_overlap 1706470 CGGCATTAAAAAAAA CCGAACGT TTA ATGTTCGG TTTCATTTAACAAAT TERM 2116 1706488 - 1706470 - R 100 -7.4 -5.86061 | opp_overlap 1706470 CGGCATTAAAAAAAA CCGAACGT TTA ATGTTCGG TTTCATTTAACAAAT atpC 1706959 - 1706510 - | ATP synthase F1, epsilon subunit atpD 1708374 - 1706974 - | ATP synthase F1, beta subunit atpG 1709396 - 1708488 - | ATP synthase F1, gamma subunit atpA 1710926 - 1709412 - | ATP synthase F1, alpha subunit TERM 2117 1709580 - 1709563 - G 72 -8.5 -3.5594 | AACTCATCTTGGAAA CGTTGAA TATC TTCAACG GCAATGTCATCAATA atpH 1711481 - 1710939 - | ATP synthase F1, delta subunit atpF 1712002 - 1711493 - | ATP synthase F0, B subunit TERM 2118 1711738 - 1711768 + g 71 -9.9 -2.89881 | gap 1, opp_overlap 1711747, overlap 1711743 GTGCACTAGCCTTCG CGTCAGCAA-CAAC CTTA GTTGCTTGTTGACG TGTGTCAGCTAACTC TERM 2119 1711956 - 1711969 + g 71 -5.3 -4.51743 | opp_overlap 1711952 1711951 1711956, overlap 1711952 ATAATAAACAGCATA TTACC TAAT GGTAA TTTGTTTGCTGCTAA atpE 1712256 - 1712029 - | ATP synthase F0, C subunit TERM 2120 1712228 - 1712199 - G 73 -9.9 -3.24902 | overlap 1712192 CAATACCACCACCAA CAGCGGCTCCAGC GGCT GCAAGACCCGCTG CGATTACACCAAGAT atpB 1713146 - 1712421 - | ATP synthase F0, A subunit TERM 2121 1713531 - 1713547 + r 100 -10.9 -5.14965 | opp_overlap 1713531 TTAAAAAACAAAAAA CACGACA AAA TGTCGTG TTTTTTAATGGCGAT TERM 2122 1713547 - 1713531 - R 100 -10.9 -6.04324 | opp_overlap 1713531 TTAAAAAACAAAAAA CACGACA AAA TGTCGTG TTTTTTAATGGCGAT pyrP 1714850 - 1713552 - | xanthine/uracil permease TERM 2123 1714917 - 1714953 + r 89 -9 -4.29073 | gap 1, opp_overlap 1714922, overlap 1714922 ATACCATTATAAACT AAAAACCTGACA-TGTT GTTA AACAATGTCAGGTTTTG TTTATTCAATTATTA TERM 2124 1714948 - 1714922 - R 95 -8.9 -5.05505 | gap 1, opp_overlap 1714917 1714922 ATTATAAACTAAAAA CCTGACA-TGTT GTTA AACAATGTCAGG TTTTGTTTATTCAAT TERM 2125 1714922 - 1714948 + r 95 -8.9 -5.10665 | gap 1, opp_overlap 1714922, overlap 1714917 ATTATAAACTAAAAA CCTGACA-TGTT GTTA AACAATGTCAGG TTTTGTTTATTCAAT prfC 1716856 - 1715345 - | peptide chain release factor 3 TERM 2126 1716139 - 1716125 - G 74 -5 -4.67755 | ATACTCACGCAAAAA TTCGGT TAC ACCAAA ATTAACTAATGCGGA TERM 2127 1716920 - 1716901 - R 84 -6.4 -5.1523 | TTCACAACAGAAAAA GCCAACCG TTAC CGATTAGC CAAACAGCATGCTGT LCK_01636 1717572 - 1716949 - | carbonic anhydrase LCK_01637 1717705 - 1718373 + | sugar kinase TERM 2128 1718363 - 1718415 + T 87 -6.4 -5.40072 | opp_overlap 1718358 1718377, overlap 1718367 1718377 CTCCTGACAATATTG CCACAACATAAAAAGCAGCGGAAC TAATT GTTCCGCTGCTTTTTATATCATCA TTTTTTTCAAAACAA TERM 2129 1718367 - 1718411 + T 100 -16 -2.69257 | opp_overlap 1718358 1718377, overlap 1718363 1718377 TGACAATATTGCCAC AACATAAAAAGCAGCGGAAC TAATT GTTCCGCTGCTTTTTATATC ATCATTTTTTTCAAA TERM 2130 1718401 - 1718377 - T 100 -15.8 -5.1523 | opp_overlap 1718367 1718363 1718377 GCCACAACATAAAAA GCAGCGGAAC TAATT GTTCCGCTGC TTTTTATATCATCAT TERM 2131 1718377 - 1718401 + T 100 -15.8 -5.01497 | opp_overlap 1718377, overlap 1718367 1718363 GCCACAACATAAAAA GCAGCGGAAC TAATT GTTCCGCTGC TTTTTATATCATCAT bacA 1719288 - 1718440 - | putative undecaprenol kinase TERM 2132 1718737 - 1718707 - G 72 -4.7 -4.80167 | TAGGAAAAATGAAAA TTCAGCGGCAACA AATCG TGATGCCCCTAAA ATAACGGCGCCTAAA TERM 2133 1719300 - 1719316 + r 73 -7.3 -3.9444 | ACATATGCCTGATGA CGTGTTA TGA TGACACG TTTCCTTCCAATTTA TERM 2134 1719581 - 1719551 - R 73 -8.3 -3.65542 | opp_overlap 1719553, overlap 1719549 1719553 TCCATCCTTAAAAGA CAGACCAGTCGTC TACTT GATGACTGGTCTT TTTGTATCTAAAAAA TERM 2135 1719553 - 1719579 + r 100 -13.1 -5.03994 | opp_overlap 1719551 1719549 1719553 CATCCTTAAAAGACA GACCAGTCGTC TACTT GATGACTGGTC TTTTTGTATCTAAAA TERM 2136 1719579 - 1719553 - R 87 -10.9 -3.40622 | opp_overlap 1719553, overlap 1719551 1719549 CATCCTTAAAAGACA GACCAGTCGTC TACTT GATGACTGGTC TTTTTGTATCTAAAA TERM 2137 1719597 - 1719618 + r 100 -9.5 -5.18726 | opp_overlap 1719597 TTTGTATCTAAAAAA CGCTTACTT TACA AAGTAGGCG TTTTTATTGTGCCAA TERM 2138 1719618 - 1719597 - R 88 -7.3 -5.08824 | opp_overlap 1719597 TTTGTATCTAAAAAA CGCTTACTT TACA AAGTAGGCG TTTTTATTGTGCCAA LCK_01639 1720281 - 1719643 - | hemolysin III-like protein TERM 2139 1720367 - 1720392 + r 71 -5.4 -4.60889 | opp_overlap 1720367, overlap 1720356 CAGCGCATATAAAAA CAGTGGCCCA TTCTTT TGGCTCACTG TTTTTAACGCTACTT TERM 2140 1720392 - 1720367 - R 70 -4 -4.9792 | gap 1, opp_overlap 1720367 1720356 CAGCGCATATAAAAA CAGTG-GCCCA TTCTT TTGGCTCACTG TTTTTAACGCTACTT LCK_01640 1721287 - 1720406 - | DegV family protein LCK_01641 1721677 - 1721336 - | protein crcB-like protein LCK_01642 1722072 - 1721674 - | CRCB domain-containing protein TERM 2141 1722446 - 1722407 - R 81 -9.6 -3.44527 | opp_overlap 1722415, overlap 1722415 CAGGGATTACCATAA TATAAAAAGCAGCTTA TGAAAAAT TAAGCTGCTTTTTAAA ATCACCACATTCCCA TERM 2142 1722438 - 1722415 - R 84 -6.8 -5.16133 | opp_overlap 1722415, overlap 1722407 ACCATAATATAAAAA GCAGCTTA TGAAAAAT TAAGCTGC TTTTTAAAATCACCA TERM 2143 1722415 - 1722438 + r 76 -6.8 -4.62069 | opp_overlap 1722415 1722407 ACCATAATATAAAAA GCAGCTTA TGAAAAAT TAAGCTGC TTTTTAAAATCACCA LCK_01643 1723869 - 1722448 - | di- or tricarboxylate transporter TERM 2144 1723351 - 1723340 - G 81 -7.2 -4.50686 | GTAAAAATTAAGAAA GCGC CAAT GCGC CGTTCACTGCCATCT LCK_01644 1725291 - 1723897 - | succinate dehydrogenase/fumarate reductase, flavoprotein subunit LCK_01645 1726689 - 1725298 - | fumarase LCK_01646 1727599 - 1726715 - | LysR family malolactic regulator TERM 2145 1726911 - 1726893 - G 75 -9.6 -3.28173 | overlap 1726891 1726894 ACCATAATACCAACA CCATTGCC TGC GGCAATGA GACCTTGTTCAGTCA TERM 2146 1726910 - 1726894 - G 76 -10.9 -2.56181 | overlap 1726893 1726891 CCATAATACCAACAC CATTGCC TGC GGCAATG AGACCTTGTTCAGTC LCK_01647 1728147 - 1727677 - | hypothetical protein ydhC 1729099 - 1728122 - | thiamin biosynthesis lipoprotein ApbE LCK_01649 1729953 - 1729096 - | fumarate reductase, flavoprotein subunit TERM 2147 1730176 - 1730155 - R 93 -8.1 -5.43866 | opp_overlap 1730155 1730172 1730174, overlap 1730172 TAACCGTCAAAAAAA GTAACTACA TTAA CGTAGTTAC TTTTTAAGTACCTTA TERM 2148 1730155 - 1730176 + r 83 -7.4 -4.68424 | opp_overlap 1730155 1730172, overlap 1730172 1730174 TAACCGTCAAAAAAA GTAACTAC ATTAAC GTAGTTAC TTTTTAAGTACCTTA LCK_01650 1730389 - 1730189 - | hypothetical protein TERM 2149 1730669 - 1730652 - H 77 -9.1 -3.23274 | overlap 1730655 GTTTGCACAATTGAA CAACGCC TGGT GGCGTCG GTAAGTCAGCTTTAC TERM 2150 1730666 - 1730655 - H 70 -7.2 -3.75766 | overlap 1730652 TGCACAATTGAACAA CGCC TGGT GGCG TCGGTAAGTCAGCTT TERM 2151 1730753 - 1730779 + H 100 -10.2 -5.10163 | TTTGTAACGCACTGA GTCTGTATGGAA ATA TGCCGTACAGAC TTTTCTTTTGACCTT TERM 2152 1730977 - 1730964 - g 87 -3.1 -5.75538 | GGCAAAAAAGAAAAA CTATG TCCC CACAG TTGGTATTTTACAAC LCK_01651 1730857 - 1731867 + | ABC transporter, substrate binding protein LCK_01652 1731864 - 1732763 + | ABC transporter, permease protein TERM 2153 1732753 - 1732743 - f 76 -4.6 -5.1675 | TCATTGATTAAAAAA GGAG TTG CCCC ACATGAGTAAACCAG TERM 2154 1732972 - 1732962 - g 71 -4 -4.93296 | overlap 1732965 GCATCACGATAAAAA CATT GCC AATG ACAGCGCAGTATCAC LCK_01653 1732756 - 1733511 + | ABC transporter, ATP-binding protein TERM 2155 1733563 - 1733532 - T 100 -14.7 -4.64334 | opp_overlap 1733541, overlap 1733541 AACGTCTTAACAAAA TCAAAAAAACGCC TTTTAC GGCGTTTTTTTGA TGCCACTAATAAAAA TERM 2156 1733541 - 1733554 + T 84 -5.2 -5.52384 | opp_overlap 1733532 1733541 ACAAAATCAAAAAAA CGCC TTTTAC GGCG TTTTTTTGATGCCAC TERM 2157 1733554 - 1733541 - T 91 -5.2 -5.81622 | opp_overlap 1733541, overlap 1733532 ACAAAATCAAAAAAA CGCC TTTTAC GGCG TTTTTTTGATGCCAC aapA 1734922 - 1733585 - | gamma-aminobutyrate permease TERM 2158 1735806 - 1735820 + G 80 -7.8 -4.46212 | AACGATGCGCGTGTT GGCGGT TTT ACCGTC TTTTCTGGTAAAAAA LCK_01655 1735164 - 1736078 + | malate/lactate dehydrogenase TERM 2159 1736155 - 1736097 - T 100 -18.8 -3.40305 | gap 1, opp_overlap 1736113, overlap 1736098 1736113 GATACAAATAAGATA TTAAGAAACAAAAAAACACCAAGTTGT ATCATA ACAACTTGGTGTTTTTTTGTTTCA-AA TATCGATGATTGTGT TERM 2160 1736155 - 1736098 - T 100 -20.4 -2.63099 | opp_overlap 1736113, overlap 1736097 1736113 ATACAAATAAGATAT TAAGAAACAAAAAAACACCAAGTTGT ATCATA ACAACTTGGTGTTTTTTTGTTTCAAA TATCGATGATTGTGT TERM 2161 1736113 - 1736140 + T 100 -12.9 -5.95539 | opp_overlap 1736113 1736097 1736098 TAAGAAACAAAAAAA CACCAAGTTGT ATCATA ACAACTTGGTG TTTTTTTGTTTCAAA TERM 2162 1736140 - 1736113 - T 100 -12.9 -6.08342 | opp_overlap 1736113, overlap 1736097 1736098 TAAGAAACAAAAAAA CACCAAGTTGT ATCATA ACAACTTGGTG TTTTTTTGTTTCAAA LCK_01656 1737394 - 1736171 - | nucleoside permease TERM 2163 1736699 - 1736675 - G 77 -6.5 -4.60255 | opp_overlap 1736675, overlap 1736681 AGAATCCCCCAAAAA TGAAAAGAAAG GCT CTTTCTTGCCA TCTTTTGCGCCAACA TERM 2164 1736693 - 1736681 - G 80 -6.3 -4.77757 | opp_overlap 1736675, overlap 1736675 CCCCAAAAATGAAAA GAAAG GCT CTTTC TTGCCATCTTTTGCG TERM 2165 1737238 - 1737210 - G 72 -9.5 -2.95919 | opp_overlap 1737213 1737214, overlap 1737209 1737213 ACGAGCCAATTAAAG CCATCTGCAGCCC CTT GGACTGCAGCTTG TCCAGCTTTGAATTG TERM 2166 1737235 - 1737213 - G 70 -9.8 -2.71246 | opp_overlap 1737213 1737214, overlap 1737210 1737209 AGCCAATTAAAGCCA TCTGCAGCCC CTT GGACTGCAGC TTGTCCAGCTTTGAA TERM 2167 1737214 - 1737234 + g 76 -11.1 -2.60714 | opp_overlap 1737213 1737210 1737209, overlap 1737213 GCCAATTAAAGCCAT CTGCAGCCC CTT GGACTGCAG CTTGTCCAGCTTTGA TERM 2168 1737566 - 1737544 - R 100 -12.2 -4.91459 | opp_overlap 1737544 TAATAGTTATAAAAA TCACCTTAAA CAG TTTAAGGTGA TTTTTTTGGCACTAT TERM 2169 1737544 - 1737566 + r 100 -12.2 -5.42862 | opp_overlap 1737544 TAATAGTTATAAAAA TCACCTTAAA CAG TTTAAGGTGA TTTTTTTGGCACTAT LCK_01657 1738534 - 1737578 - | inner-membrane translocator TERM 2170 1738483 - 1738471 - G 84 -7.7 -4.68424 | CAATGGACGTAAAAA TCAGC GGT GCTGA ATAAACCAATGTACT LCK_01658 1739673 - 1738537 - | ABC transporter, permease protein TERM 2171 1738574 - 1738587 + g 83 -5.2 -5.31275 | TTATTACTGTCAGCA GCGG CCTTCA CCGC TTTTTTATCCTGAGA LCK_01659 1741229 - 1739673 - | carbohydrate ABC transporter periplasmic-binding protein TERM 2172 1739982 - 1739994 + g 74 -4.8 -4.78572 | GCGGTTTAACTCACG GGCA ATAAC TGCC TTTTGTTGATTCCCA TERM 2173 1741244 - 1741261 + r 83 -9.9 -3.74749 | TTTATCTTCTCAGAG CGTATGC CGCG GCATACG TTTCCACTTTCTGAT TERM 2174 1741292 - 1741317 + r 83 -6.1 -5.06414 | gap 1, opp_overlap 1741293, overlap 1741293 1741293 TATATTTTTAAAAAA ACCC-CGGACAG AAT CTGTTCGTGGGA TTTTTCTTCAAAGAG TERM 2175 1741293 - 1741315 + r 76 -9.8 -2.77538 | opp_overlap 1741293, overlap 1741292 1741293 ATATTTTTAAAAAAA CCCCGGACAG AAT CTGTTCGTGG GATTTTTCTTCAAAG TERM 2176 1741293 - 1741316 + r 82 -9.6 -3.63367 | gap 1, opp_overlap 1741293, overlap 1741293 1741292 ATATTTTTAAAAAAA CCC-CGGACAG AAT CTGTTCGTGGG ATTTTTCTTCAAAGA TERM 2177 1741315 - 1741293 - R 93 -7.6 -5.42862 | opp_overlap 1741293 1741293 1741292 ATATTTTTAAAAAAA CCCCGGACAG AAT CTGTTCGTGG GATTTTTCTTCAAAG LCK_01660 1741727 - 1741431 - | arginine repressor domain-containing protein TERM 2178 1741591 - 1741622 + gr 95 -8.8 -5.2015 | overlap 1741594 CCCGCATAGTTACTC GTCCGCACTAACAA CGAT TTGTTATTGCGTAC TTTTTCTATTGTTAA TERM 2179 1741594 - 1741619 + gr 79 -9.1 -3.40146 | overlap 1741591 GCATAGTTACTCGTC CGCACTAACAA CGAT TTGTTATTGCG TACTTTTTCTATTGT uviB 1741959 - 1741666 - | UviB; bacteriocin LCK_01662 1742119 - 1743522 + | Trk-type K+ transport system, membrane component TERM 2180 1743867 - 1743846 - g 89 -9.5 -4.24002 | opp_overlap 1743849 TGCTAAAGCTGAAAA CAAGACACA TTTA CGTGTCTTG ACTAAAATAGGTGCT LCK_01663 1743541 - 1744206 + | K+ transport system, NAD-binding component TERM 2181 1744208 - 1744266 + T 100 -17.3 -4.59984 | gap 1, opp_overlap 1744212 1744214 1744223, overlap 1744212 1744214 CAAACCGCACATAAC CAAAG-ATTATTAAAAGCCCTAAGTTGA CAAA TCAACTTAGGGCTTTTAATAATGCTTAA TTTTGTATAAATTTT TERM 2182 1744212 - 1744262 + T 100 -22.5 -3.79162 | gap 1, opp_overlap 1744212 1744214 1744223, overlap 1744208 1744214 CCGCACATAACCAAA G-ATTATTAAAAGCCCTAAGTTGA CAAA TCAACTTAGGGCTTTTAATAATGC TTAATTTTGTATAAA TERM 2183 1744261 - 1744212 - T 100 -22.7 -4.04174 | opp_overlap 1744212 1744208 1744214, overlap 1744214 1744223 CCGCACATAACCAAA GATTATTAAAAGCCCTAAGTTGA CAAA TCAACTTAGGGCTTTTAATAATG CTTAATTTTGTATAA TERM 2184 1744259 - 1744214 - T 100 -25.3 -3.61097 | opp_overlap 1744212 1744208 1744214, overlap 1744212 1744223 GCACATAACCAAAGA TTATTAAAAGCCCTAAGTTGA CAAA TCAACTTAGGGCTTTTAATAA TGCTTAATTTTGTAT TERM 2185 1744214 - 1744259 + T 100 -25.3 -2.97123 | opp_overlap 1744214 1744212 1744223, overlap 1744212 1744208 GCACATAACCAAAGA TTATTAAAAGCCCTAAGTTGA CAAA TCAACTTAGGGCTTTTAATAA TGCTTAATTTTGTAT TERM 2186 1744250 - 1744223 - T 100 -17.2 -4.37067 | opp_overlap 1744214 1744212 1744208, overlap 1744214 1744212 CAAAGATTATTAAAA GCCCTAAGTTGA CAAA TCAACTTAGGGC TTTTAATAATGCTTA LCK_01664 1745084 - 1744263 - | cell surface hydrolase LCK_01665 1745600 - 1745175 - | redox protein, regulator of disulfide bond formation LCK_01666 1746166 - 1745627 - | PadR family transcriptional regulator LCK_01667 1747726 - 1746185 - | putative MDR permease; transmembrane efflux protein TERM 2187 1747731 - 1747781 + r 93 -14.4 -2.57564 | overlap 1747731 CGCTTTTTCATCAGC TTCCTCATTTCCGTTTATATTAAC ATT GTTAATATAAACGGAAATGATAAC ATTGTCAAGCCATAA TERM 2188 1747731 - 1747782 + r 91 -12.8 -3.29511 | gap 1, overlap 1747731 CGCTTTTTCATCAGC T-TCCTCATTTCCGTTTATATTAAC ATT GTTAATATAAACGGAAATGATAACA TTGTCAAGCCATAAA TERM 2189 1747803 - 1747822 + r 89 -9.4 -4.20042 | opp_overlap 1747803 AAGCCATAAAAAAAA CCATTATC CAAA GATAATGG TTTTACACTGTTGCT TERM 2190 1747822 - 1747803 - R 100 -9.4 -5.97575 | opp_overlap 1747803 AAGCCATAAAAAAAA CCATTATC CAAA GATAATGG TTTTACACTGTTGCT LCK_01668 1748143 - 1747838 - | IkappaB kinase complex, IKAP component TERM 2191 1748097 - 1748107 + g 73 -6.8 -4.1523 | opp_overlap 1748097 1748096 AGTGCAGAATATAAT CGCA AAA TGCG TTGTTTATCATTAAA LCK_01669 1748242 - 1748640 + | methyl-accepting chemotaxis protein TERM 2192 1748719 - 1748705 - g 77 -10 -3.40775 | overlap 1748703 ATTTGCACCGAAAGA TCAGCG AAC CGCTGA TATGCCGACCACAAA LCK_01670 1748637 - 1749143 + | phospholipid-binding protein TERM 2193 1749144 - 1749159 + F 93 -7.6 -5.63504 | opp_overlap 1749146 CCAGCACGTGCTTAA CACCTA GCAA TAGGTG TTTTTTTATGCAATT argC 1749268 - 1750311 + | acetylglutamate semialdehyde dehydrogenase TERM 2194 1750886 - 1750908 + G 74 -4.8 -4.73613 | TCTGGAATGATTCAT CCGAACATGG CAA CAATGTTAGG TTTTATTACTACTGA argJ 1750328 - 1751542 + | arginine biosynthesis bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase argB 1751565 - 1752302 + | acetylglutamate kinase argD 1752313 - 1753434 + | ornithine/acetylornithine aminotransferase TERM 2195 1753434 - 1753416 - T 73 -4 -5.15526 | opp_overlap 1753425 1753432 AGATAAAATTAAAAA TTATCTTT CTA AAAAATAA GTGTTGACATTTATT TERM 2196 1753605 - 1753582 - T 100 -12.6 -6.23317 | opp_overlap 1753582 ATAAAAATAAAAAAA GGTAGTCAAA TTAA TTTGACTACC TTTTTATTTTTAGAT TERM 2197 1753582 - 1753605 + T 100 -12.6 -5.63236 | opp_overlap 1753582 ATAAAAATAAAAAAA GGTAGTCAAA TTAA TTTGACTACC TTTTTATTTTTAGAT TERM 2198 1753660 - 1753645 - T 81 -7.6 -4.42386 | TTTTGATTGACAAAA GAACAC TACC GTGTTC GCCTAAGATGCCTTT ubiE 1754387 - 1753677 - | methylase involved in ubiquinone/menaquinone biosynthesis menE 1755916 - 1754432 - | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligases II atkY 1755960 - 1756394 + | transcriptional regulator TERM 2199 1756664 - 1756674 + G 93 -5.4 -5.55664 | CTGCTATATTTTATT GGTT CAA AACC TTTTTTTGATGGTGC TERM 2200 1756733 - 1756715 - g 80 -4.5 -5.22943 | ATCAAAGCTAAAAAA CCAGCCA TGATG TGTCTGG TCAGTATGGGGCTAT TERM 2201 1757985 - 1757973 - g 81 -5.5 -5.1764 | GAGACAATATAAAAA CAGCC CCA AGCTG TTGCCAATCAACTGA LCK_01678 1756391 - 1758022 + | copper-transporting ATPase copB1 1758081 - 1758437 + | histidine rich P type ATPase TERM 2202 1758430 - 1758447 + T 89 -7 -5.34555 | opp_overlap 1758421 1758430, overlap 1758424 ACACACCTGCAAAAA GCCGTT GATTTA AACGGC TTTTTTGTAGTATGA TERM 2203 1758447 - 1758430 - T 80 -7 -4.61633 | opp_overlap 1758430 1758424, overlap 1758421 ACACACCTGCAAAAA GCCGTT GATTTA AACGGC TTTTTTGTAGTATGA LCK_01681 1759132 - 1758464 - | hypothetical protein TERM 2204 1759289 - 1759259 - R 87 -10.7 -3.36273 | gap 1, opp_overlap 1759267, overlap 1759267 TGTGGCCAACATCAA CAAAAAAAGACGTC TTAT GACGTC-TTTTTTG AACTACTCAGACAAA TERM 2205 1759282 - 1759267 - R 100 -9 -5.85737 | opp_overlap 1759267, overlap 1759259 ACATCAACAAAAAAA GACGTC TTAT GACGTC TTTTTTGAACTACTC TERM 2206 1759267 - 1759282 + r 95 -9 -5.06451 | opp_overlap 1759267 1759259 ACATCAACAAAAAAA GACGTC TTAT GACGTC TTTTTTGAACTACTC gntP2 1760651 - 1759296 - | gluconate:H(+) symporter TERM 2207 1760086 - 1760052 - G 77 -9.4 -3.53811 | opp_overlap 1760052 GGCATCGGGTGCAAA TTTCTGAGCGAGTTTT GTG AAAACTGGCCCAGCAA TGATTGCTGCTGGAA glpF 1760935 - 1761654 + | glycerol uptake facilitator TERM 2208 1761708 - 1761650 - T 100 -33.2 -2.88854 | opp_overlap 1761657 1761662 1761668, overlap 1761657 1761662 1761668 ACGTTAAAGAAACAG CTTAATATCAAAGTAAAAGAGCTTCGTC AAT GACGAAGCTCTTTTACTTTGATATTAAA CATGTAACTGCTTAG TERM 2209 1761657 - 1761701 + T 100 -29.1 -3.05343 | opp_overlap 1761657 1761650 1761662 1761668, overlap 1761662 1761668 AGAAACAGCTTAATA TCAAAGTAAAAGAGCTTCGTC AAT GACGAAGCTCTTTTACTTTGA TATTAAACATGTAAC TERM 2210 1761701 - 1761657 - T 100 -29.1 -3.1162 | opp_overlap 1761657 1761662 1761668, overlap 1761650 1761662 1761668 AGAAACAGCTTAATA TCAAAGTAAAAGAGCTTCGTC AAT GACGAAGCTCTTTTACTTTGA TATTAAACATGTAAC TERM 2211 1761662 - 1761696 + T 100 -23.2 -3.92592 | opp_overlap 1761662 1761657 1761650 1761668, overlap 1761657 1761668 CAGCTTAATATCAAA GTAAAAGAGCTTCGTC AAT GACGAAGCTCTTTTAC TTTGATATTAAACAT TERM 2212 1761696 - 1761662 - T 100 -23.2 -3.93038 | opp_overlap 1761657 1761662 1761668, overlap 1761657 1761650 1761668 CAGCTTAATATCAAA GTAAAAGAGCTTCGTC AAT GACGAAGCTCTTTTAC TTTGATATTAAACAT TERM 2213 1761668 - 1761690 + T 100 -16.4 -4.61284 | opp_overlap 1761668 1761662 1761657 1761650, overlap 1761662 1761657 AATATCAAAGTAAAA GAGCTTCGTC AAT GACGAAGCTC TTTTACTTTGATATT TERM 2214 1761690 - 1761668 - T 100 -16.4 -4.61284 | opp_overlap 1761662 1761657 1761668, overlap 1761662 1761657 1761650 AATATCAAAGTAAAA GAGCTTCGTC AAT GACGAAGCTC TTTTACTTTGATATT rluA 1762624 - 1761704 - | pseudouridylate synthase, 23S RNA-specific LCK_01685 1763131 - 1762631 - | transcriptional regulator LCK_01686 1764216 - 1763149 - | glycosyltransferase TERM 2215 1763469 - 1763454 - G 79 -3.2 -5.41746 | AAGTTTGCAAAAAAA TACTGG CTGC CCTGTA ATGCTTCTTTAGTGC LCK_01687 1766516 - 1764306 - | phosphoglycerol transferase TERM 2216 1764611 - 1764632 + g 74 -3.9 -5.16841 | gap 1, overlap 1764626 ACTTTTCATTAACGC CTTTTTGGAT GGT AT-CAAAAAG TTTTTGTTGGTCTGG TERM 2217 1765023 - 1765035 + g 74 -4.9 -4.68994 | ATGATCCCCATAGAG TACAA CCA TTGTA TTTTTAGCTAATCCT LCK_01688 1766566 - 1767009 + | histone acetyltransferase HPA2 TERM 2218 1767034 - 1766984 - T 75 -8.8 -3.35539 | gap 1, opp_overlap 1766998, overlap 1766980 1766982 1766987 1766998 CAGGAATTAAACATA TTA-GTATGAAAAAAGAATTGAA CTAGTT TTCAATTCTTTTTTCATACGCTA CCTCAACCTGAATCT TERM 2219 1767030 - 1766987 - T 100 -18.7 -2.8335 | opp_overlap 1766998, overlap 1766980 1766982 1766984 1766998 GAATTAAACATATTA GTATGAAAAAAGAATTGAA CTAGTT TTCAATTCTTTTTTCATAC GCTACCTCAACCTGA TERM 2220 1767019 - 1766998 - T 83 -6 -5.19212 | opp_overlap 1766998, overlap 1766987 1766982 1766984 ATTAGTATGAAAAAA GAATTGAA CTAGTT TTCAATTC TTTTTTCATACGCTA TERM 2221 1766998 - 1767019 + T 83 -6 -5.15634 | opp_overlap 1766998 1766987 1766982 1766984 ATTAGTATGAAAAAA GAATTGAA CTAGTT TTCAATTC TTTTTTCATACGCTA LCK_01689 1767809 - 1767006 - | hypothetical protein TERM 2222 1767311 - 1767299 - G 77 -7.7 -4.21908 | GATGATTAGCGAAAA CAACG CCA CGTTG GGCTATGATTTGTCG LCK_01690 1768238 - 1767810 - | hypothetical protein TERM 2223 1768190 - 1768162 - Gg 72 -9.7 -2.92667 | opp_overlap 1768160, overlap 1768159 1768151 TTAACCGCCAAATTA GCTGCACTAATAG CCA CTATTAGTGAAAC AATTGCTGACGGTGT LCK_01691 1767940 - 1768281 + | hypothetical protein TERM 2224 1768373 - 1768356 - fH 100 -11.3 -4.4959 | CTTAAGCAACGAAAA CCCGCAA CTGC TTGCGGG CGGACATTTTTATAA TERM 2225 1769166 - 1769189 + G 73 -8.3 -3.78778 | ACCGATATTTTAGCA GGTATCAAT AATGGG ATTGATACC TTATTAGTGTACTCA LCK_01692 1768515 - 1769288 + | HAD family sugar phosphatase TERM 2226 1769292 - 1769317 + T 100 -9.1 -5.86976 | opp_overlap 1769292 TGGTCAATATAAAAA GCAACTGTTTC ATGT GAAACAATTGC TTTTTTATTTTATGC TERM 2227 1769317 - 1769292 - T 100 -11.3 -5.0916 | opp_overlap 1769292 TGGTCAATATAAAAA GCAACTGTTTC ATGT GAAACAATTGC TTTTTTATTTTATGC LCK_01693 1770529 - 1769327 - | major facilitator superfamily permease TERM 2228 1770507 - 1770517 + g 70 -2.6 -5.10461 | overlap 1770499 ATTGTGATAAAACCT TTAT TGA ATAA TTTTTCTTCCATCAA TERM 2229 1770883 - 1770862 - R 100 -11.7 -5.63517 | opp_overlap 1770862 CTTGCAAACAAAAAA GGATGTTTC CATT GAAACATCC TTTATCATGGGCCTG TERM 2230 1770862 - 1770883 + r 93 -11.7 -3.96624 | opp_overlap 1770862 CTTGCAAACAAAAAA GGATGTTTC CATT GAAACATCC TTTATCATGGGCCTG TERM 2231 1771807 - 1771786 - R 86 -5.9 -5.58209 | opp_overlap 1771788 TTAAACTTAAAAAAA GAGTTTGAA TTCC TTCAACCTC TATGCACCTAGCAGG TERM 2232 1775585 - 1775600 + r 77 -6.2 -4.65219 | opp_overlap 1775584 ACCTGCGATTAAACC GTTCTT TTTA AAGAAC TTCTTTTTGTGTTGT TERM 2233 1775744 - 1775760 + r 81 -10.9 -2.62616 | TCGAACCGCTGACCC CCTGCTT GCA AAGCAGG TGCTCTCCCAGCTGA TERM 2234 1775916 - 1775935 + r 72 -9.2 -2.65808 | opp_overlap 1775907 1775904, overlap 1775913 1775913 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 2235 1778019 - 1778007 - R 72 -4.9 -4.65933 | TATTCTCAAAATAAA TTAAG TGC CTTAA TGCGATTTGCTGCTT LCK_01694 1779175 - 1777997 - | aspartate/tyrosine/aromatic aminotransferase LCK_01695 1779977 - 1779186 - | amidohydrolase TERM 2236 1779221 - 1779245 + g 76 -9.3 -3.70109 | opp_overlap 1779221 1779223 GGCGATCATTGAACA CAGGTATTTCG CCA CGAATTGCCTG TTCTTGACTAATATC TERM 2237 1780075 - 1780064 - R 100 -7.2 -5.79595 | opp_overlap 1780064 TTTTAAAATAAAAAA CGCC TACT GGCG TTTAAGGGAATTTTG menB 1780910 - 1780077 - | dihydroxynaphthoic acid synthase LCK_01697 1780951 - 1781325 + | thioesterase family protein TERM 2238 1781350 - 1781316 - T 82 -4.4 -5.49809 | opp_overlap 1781323, overlap 1781323 TAAATGTCAAAAAAA GAACAAATAACACGAA TTC TACGTGTTATTTTTTA TTTGCCGTAAAAAAA TERM 2239 1781343 - 1781323 - T 88 -6.9 -4.89605 | opp_overlap 1781323, overlap 1781316 CAAAAAAAGAACAAA TAACACGAA TTC TACGTGTTA TTTTTTATTTGCCGT TERM 2240 1781323 - 1781343 + T 93 -6.9 -5.64421 | opp_overlap 1781323 1781316 CAAAAAAAGAACAAA TAACACGAA TTC TACGTGTTA TTTTTTATTTGCCGT LCK_01698 1782372 - 1781341 - | accessory secretory protein Asp3 TERM 2241 1781377 - 1781366 - G 79 -3.6 -5.40072 | TTTGCCGTAAAAAAA CGCG CAAC CGCA TTTTTCTTGGGATGA TERM 2242 1782185 - 1782166 - G 76 -7.2 -4.1552 | gap 1 GATGTGCTTAATAAA TGCGTAGGT CTC ACC-ACGCA ATAACTGTGGTAAAT LCK_01699 1783902 - 1782376 - | accessory secretory protein Asp2 LCK_01700 1785390 - 1783906 - | accessory secretory protein Asp1 TERM 2243 1784980 - 1784966 - G 79 -5.6 -4.97158 | opp_overlap 1784965 1784966 GCACACGAAATAAAA CCACGA TCA TCGAGG ATTAATTCTTGCACG LCK_01701 1786126 - 1785494 - | histone acetyltransferase HPA2 LCK_01702 1786258 - 1786803 + | hypothetical protein fadA 1787951 - 1786800 - | Acetyl coenzyme A acetyltransferase TERM 2244 1787543 - 1787553 + g 73 -5.4 -4.57482 | CCATCGGAAAGCGTT TGAG TGG CTCA TTTGTTTCTCGATCA LCK_01704 1789228 - 1787948 - | Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II TERM 2245 1788415 - 1788431 + g 83 -6.5 -5.09895 | opp_overlap 1788412, overlap 1788412 CATCCGCAAACAGTC GGCCAAC TTG GTTGACC TTTTTTCCGTGCATC TERM 2246 1789086 - 1789106 + g 75 -9.7 -3.29511 | opp_overlap 1789083 1789081 ATTAAAACCACATAT GGCGCATTG AAT TGATGCGCC TTATAAACAGCTGCC TERM 2247 1789267 - 1789288 + r 100 -11.7 -5.41143 | opp_overlap 1789267 TAACCTAATGAAAAA CGATGTTTC ACGT GAAACATCG TTTTTTTAAGCCATA TERM 2248 1789288 - 1789267 - R 100 -11.7 -4.90013 | opp_overlap 1789267 TAACCTAATGAAAAA CGATGTTTC ACGT GAAACATCG TTTTTTTAAGCCATA LCK_01705 1789866 - 1789294 - | adenine/guanine phosphoribosyltransferase LCK_01706 1790802 - 1789879 - | Mg2+ or Co2+ transporter LCK_01707 1791250 - 1790786 - | histone acetyltransferase HPA2 TERM 2249 1790917 - 1790929 + g 70 -3.3 -4.91109 | CAACTTTCAGTTCCA GCGGA TGG TGCGC TTTTTGTCGTGCCCA TERM 2250 1791341 - 1791353 + r 71 -3.5 -5.13354 | opp_overlap 1791341, overlap 1791336 TTCTTGAGACTAAAT TATTT ATT AAATA TTTGTTTTTTGTAAC LCK_01708 1793020 - 1791347 - | glycerophosphoryl diester phosphodiesterase TERM 2251 1791769 - 1791786 + g 70 -3.5 -4.87291 | gap 1, overlap 1791771 CCAATAACGCTTGTG TC-GTGAT TGT ATCACTGA TTTTTAATTCAACTA TERM 2252 1792051 - 1792069 + g 70 -3.1 -4.84761 | overlap 1792026 1792034 CTTGTGTCAGTGTCG CAAGCGT ATTTG GTGCTTG TTTTTCTGAAGCTAT TERM 2253 1792312 - 1792327 + g 90 -9 -5.06414 | opp_overlap 1792307 1792311 CAATAGCAATGAGAG CGTTGG CTAT CCAACG TTTTTGTTCGCCCAC TERM 2254 1793084 - 1793135 + r 100 -17.2 -3.51597 | gap 1, opp_overlap 1793096, overlap 1793086 1793096 ACGGTGTCGTCTTTA GAA-TAATAAAAAGCCATGTTAC TGATTTC GTAACATGGCTTTTTATTAATTC TTATAATTAACGCTT TERM 2255 1793086 - 1793132 + r 100 -15.6 -3.8917 | opp_overlap 1793096, overlap 1793084 1793096 GGTGTCGTCTTTAGA ATAATAAAAAGCCATGTTAC TGATTTC GTAACATGGCTTTTTATTAA TTCTTATAATTAACG TERM 2256 1793122 - 1793096 - R 100 -11 -5.34365 | opp_overlap 1793086 1793084 1793096 TTAGAATAATAAAAA GCCATGTTAC TGATTTC GTAACATGGC TTTTTATTAATTCTT TERM 2257 1793096 - 1793122 + r 100 -11 -5.23396 | opp_overlap 1793096, overlap 1793086 1793084 TTAGAATAATAAAAA GCCATGTTAC TGATTTC GTAACATGGC TTTTTATTAATTCTT LCK_01709 1793981 - 1793142 - | preprotein translocase subunit YidC rnpA 1794328 - 1793978 - | ribonuclease P protein component TERM 2258 1794450 - 1794432 - R 95 -8.8 -5.65927 | opp_overlap 1794432 TATCGAAATAAAAAA GCCACTGC TTA GCAGCGAC CTTGTTAGGCTGATA rpmH 1794589 - 1794455 - | ribosomal protein L34 TERM 2259 1794783 - 1794765 - R 85 -4.5 -5.66338 | AAATACAATAAAAAA CCCAACC ATAAG GGCTAGG CTTTGAGTAAATTAT LCK_01712 1795484 - 1794795 - | hypothetical protein TERM 2260 1795453 - 1795475 + g 70 -5.5 -4.46669 | gap 1, overlap 1795456 TTACTATTCACTTTA GCGGCAGCCC CATC GGTCTGC-GC TTTCTTCATTTTGAT rluC 1796141 - 1795608 - | 16S rRNA uridine-516 pseudouridylate synthase