TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.677574 %AT, 1627708 nt, 9661 terms. Intergenic: 0.776829 %AT, H2T: 151767 nt, 1650 terms; T2T: 30858 nt, 829 terms; H2H: 61363 nt, 1339 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|148642060|ref|NC_009515.1| Methanobrevibacter smithii ATCC 35061, complete genome (length 1853160) Msm_0001 1697 - 114 - | exoribonuclease VII, large subunit, XseA TERM 1 2278 - 2250 - g 76 -6.1 -4.63993 | overlap 2251 AATGTTAAAAAACAA CTAAGACACTACC GTA GATACTGTCTTAA AGGTAGAGGCAATAA TERM 2 3133 - 3123 - g 72 -2.6 -5.35815 | opp_overlap 3123 CATATTAAACAAAAA TTAA AAC TTAA TAATATGAAAGCTAT Msm_0002 2073 - 3152 + | integrase-recombinase protein TERM 3 3140 - 3162 + T 76 -6.4 -4.39347 | opp_overlap 3140 3139 AAAACTTAATAATAT GAAAGCTA TGTAATT TAGCTTTC TTTTAAATATTTTTT TERM 4 3456 - 3473 + T 79 -9.9 -2.82909 | opp_overlap 3455 3452, overlap 3455 3453 TAAATATTATATGAG TCGGCAT TAGT ATGCCGA ATATTTCTGTATTTA TERM 5 3903 - 3887 - T 95 -5.9 -5.56263 | opp_overlap 3887 ATGATAAAAGAAAAA GGAATTT ATA AAATCCC TTAATCATCATAATA Msm_0003 4335 - 3904 - | hypothetical protein Msm_0004 4965 - 4423 - | lysine decarboxylase Msm_0005 5253 - 5005 - | hypothetical protein Msm_0006 5371 - 5240 - | hypothetical protein Msm_0007 5943 - 5560 - | SAM-dependent methyltransferase TERM 6 5976 - 6009 + H 71 -3.3 -5.59502 | overlap 5980 GAGGTCCGCTTCCCA AAAATGAGTCTGTAA AATT TTATAGGCTTATTTG TTTTTTAATTTTTTA TERM 7 5980 - 6005 + H 70 -4.1 -5.14819 | overlap 5976 TCCGCTTCCCAAAAA TGAGTCTGTAA AATT TTATAGGCTTA TTTGTTTTTTAATTT Msm_0008 6134 - 7339 + | putative transposase Msm_0009 7767 - 7342 - | hypothetical protein TERM 8 8230 - 8216 - g 83 -5.8 -5.31275 | GGCTATGACAAAAAA TTCAAA GAA TTTGAA GGATTATATAATAAA Msm_0010 7976 - 8551 + | GNAT family N-acetyltransferase Msm_0011 9069 - 8560 - | hypothetical protein TERM 9 8936 - 8955 + g 71 -2.2 -5.45726 | opp_overlap 8930 8936 ACTACGGAAGAAACA GAGTTT CCAATAAT AAACTC TTTTTTTGAAGTCTC Msm_0012 10137 - 9331 - | hypothetical protein TERM 10 9759 - 9771 + g 79 -4.9 -5.26119 | TTGTGTATGGCTTAA TTTCA GTA TGAAA TTTTGTTTTTGGCAA Msm_0013 10936 - 10652 - | hypothetical protein Msm_0014 11382 - 11089 - | putative heat shock related protein Msm_0015 11425 - 11967 + | hypothetical protein Msm_0016 11983 - 12246 + | hypothetical protein Msm_0017 12300 - 12551 + | hypothetical protein Msm_0018 12548 - 12811 + | hypothetical protein Msm_0019 13129 - 13251 + | hypothetical protein Msm_0020 13666 - 13349 - | O-linked GlnNAc transferase Msm_0021 14122 - 14931 + | short chain dehydrogenase (7-alpha-hydroxysteroid dehydrogenase) TERM 11 14932 - 14951 + T 100 -8 -5.44837 | opp_overlap 14935 TCTCGTACATGGTAA TTAGTACT ATTA AGTACTAA TTTTTATATTTTTTT Msm_0022 15182 - 15009 - | hypothetical protein Msm_0023 16374 - 15370 - | hypothetical protein Msm_0024 16646 - 16371 - | hypothetical protein Msm_0025 18820 - 17174 - | acyl-CoA synthetase TERM 12 17573 - 17587 + g 70 -4.3 -4.75934 | GGAGTGTAAAAATCC GTCAT CTTCA ATGAC TTCTTTTGTTTTTTC TERM 13 18387 - 18373 - G 72 -7.2 -3.78034 | opp_overlap 18364 GACCTACATGAATAA CATGTT TTA AACATG GAAATTTTTCTGAAG Msm_0026 19425 - 18844 - | transcriptional regulator Msm_0027 21277 - 19640 - | glutamate synthase domain-containing protein TERM 14 21669 - 21653 - g 72 -3.7 -5.19819 | opp_overlap 21653, overlap 21646 AAACAAAACTAAAAA CTTAAAC AAT GTTGAAG TTTCTGTTGGAGATT Msm_0028 21411 - 22013 + | SAM-dependent methyltransferase TERM 15 22020 - 22030 + T 73 -4 -5.40072 | TCCAAATAATTTTTT TCTA CAA TAGA TTTTTTTAAAAACAC Msm_0029 22980 - 22321 - | putative calcium-binding protein TERM 16 22929 - 22910 - G 74 -8.6 -3.25942 | overlap 22923 ATTTCTTTAGATGAA TCAGCTGC AAAA ACAGCTGA AACTGAAATTAAAAA Msm_0030 23689 - 23135 - | hypothetical protein TERM 17 23802 - 23771 - R 100 -9 -5.86332 | opp_overlap 23775 23780, overlap 23775 TTAATTTAAAAAAAA TAAAGAAAATAAGT AAAT ACTTATTTTCTTTT TACAATAACAACAGC TERM 18 23798 - 23775 - R 100 -9.8 -5.33985 | opp_overlap 23775 23780, overlap 23771 TTTAAAAAAAATAAA GAAAATAAGT AAAT ACTTATTTTC TTTTTACAATAACAA TERM 19 23775 - 23798 + r 88 -9.8 -4.62069 | opp_overlap 23771 23775, overlap 23780 TTTAAAAAAAATAAA GAAAATAAGT AAAT ACTTATTTTC TTTTTACAATAACAA TERM 20 23780 - 23793 + r 70 -3.9 -5.27023 | opp_overlap 23775 23771, overlap 23775 AAAAAATAAAGAAAA TAAGT AAAT ACTTA TTTTCTTTTTACAAT Msm_0031 24855 - 23791 - | adhesin-like protein TERM 21 23922 - 23934 + g 76 -5.5 -5.09225 | TGTTTTCAATAGCTG GCGGT TCT ACTGC TTTTTTACCTACACT TERM 22 24829 - 24845 + g 76 -5.3 -4.95211 | opp_overlap 24829 GAGCAAAATGAATAG TAAAATA ATA TATTTTA TTTTGTTCATTTTTT Msm_0032 25099 - 24986 - | hypothetical protein Msm_0033 25224 - 26174 + | ketopantoate reductase, ApbA Msm_0034 26506 - 26171 - | hypothetical protein TERM 23 26388 - 26404 + g 76 -3.7 -5.41746 | CTTTTTTTATGTTTG CCTATAT TTG ATGTGGG TTTTTTTGAAGAATT Msm_0035 27097 - 26519 - | hypothetical protein Msm_0036 28018 - 27314 - | hypothetical protein TERM 24 28257 - 28247 - g 70 -4 -5.07486 | opp_overlap 28247 GACGGTGAAGAAAAA GAAA TCG TTTC ATTAATAGTAGGGGA Msm_0037 28082 - 28510 + | hypothetical protein Msm_0038 29048 - 29536 + | hypothetical protein Msm_0039 30032 - 30475 + | hypothetical protein Msm_0040 30477 - 30749 + | hypothetical protein Msm_0041 31019 - 30744 - | hypothetical protein Msm_0042 31209 - 31030 - | hypothetical protein TERM 25 31413 - 31389 - g 71 -8.6 -2.95522 | overlap 31388 TCATACAAACAGAAG TGGGATATGC AAACG GCATAACCCA TGACCCCACATATGA Msm_0043 31292 - 32077 + | peptide methionine sulfoxide reductase, PMSR (protein repair; stress) Msm_0044 33221 - 32058 - | PLP dependent aminotransferase (aspartate) Msm_0045 34285 - 33413 - | nucleotide-binding protein (putative ATPase involved in chromosome partitioning) Msm_0046 35700 - 34366 - | NADH oxidase TERM 26 36177 - 36166 - g 81 -4.4 -5.44721 | opp_overlap 36166 ATTATGTTAAAAAAA CATC AGCT GATG TGTTATCCAGCAAAA Msm_0047 35826 - 36452 + | chloramphenicol O-acetyltransferase Msm_0048 36765 - 36436 - | hypothetical protein Msm_0049 37475 - 36795 - | F420-dependent NADP oxidoreductase, fno Msm_0050 38045 - 37497 - | metal-binding protein TERM 27 38121 - 38098 - R 79 -6.9 -4.51984 | AAAAAAAGAAAAAGA TAAGAGATT AGTTAA AATCTCTTA AGCAATTGTTATAGT Msm_0051 41187 - 38119 - | adhesin-like protein TERM 28 39369 - 39379 + g 74 -4 -5.29846 | opp_overlap 39359, overlap 39354 TATTATTACCATTAG TGAT AAT ATCA TTTTTATTTAGGGTT TERM 29 39702 - 39692 - G 74 -5.4 -4.84274 | opp_overlap 39692 39690 GAATCAGAGTAAAAA GCAT TTG ATGC TATTGTAAAGTTTTT TERM 30 41017 - 40990 - G 82 -10.8 -2.61264 | overlap 40989 41006 TGCTTCACTTACAAC TGCATTATCATC ATAA GATGATAATACA CTAACATCATCAGTT Msm_0052 48915 - 41323 - | adhesin-like protein TERM 31 48710 - 48732 + g 71 -5.6 -4.56159 | opp_overlap 48710, overlap 48706 GGAACAACATTTAAA GCATGAGTTA AAC TAGCTAATGC TTTGTCTTTTGTTGA Msm_0053 50493 - 49123 - | tRNA CCA-pyrophosphorylase TERM 32 49697 - 49710 + g 77 -3.1 -5.66229 | AATTTATTAGCTACC GGGTA AAAA TACTC TTTTTTATTGTTGCT Msm_0054 51055 - 50498 - | 2'-5' RNA ligase, LigT Msm_0055 52171 - 51065 - | 3-dehydroquinate synthase TERM 33 52112 - 52134 + g 74 -4.2 -5.1471 | GACATAGCTGATGCC TGATTCCAAT GCA GTTGTAATCA TTTCTTTTTTATCAT Msm_0056 52999 - 52205 - | fructose-bisphosphate aldolase TERM 34 53147 - 53130 - R 73 -4.2 -5.32608 | opp_overlap 53130 AAAAAAGTTAAAAAA GTATCA AATTAA TGATAC TTTCTATTTATTCTC Msm_0057 53910 - 53155 - | adhesin-like protein TERM 35 54268 - 54247 - R 76 -3.8 -5.86609 | CCAAAAAAATAAAAA GAAATCCA AATTAA TGAATTTC CTTTAATTTACATAA Msm_0058 58788 - 54271 - | DNA helicase II TERM 36 58536 - 58551 + g 70 -6.2 -4.17516 | CATTACGGTATTTTC TTGCTT TTTG AAGCAA TTTCTCTGATTTGGA Msm_0059 59421 - 58882 - | SAM-dependent methyltransferase Msm_0060 60262 - 59408 - | GHMP family kinase TERM 37 59654 - 59672 + g 70 -3.9 -5.08824 | AAAATTCCCAATTGA CGGATTT TCTAC AAATCTG TTTTTTAACTCCAAA TERM 38 60241 - 60225 - G 71 -2.2 -5.47399 | TCAATGCTAAAAAAA CCGG TAATGTGAC CCGG AACAAAAACTGAAAT Msm_0061 61476 - 60289 - | ATPase Msm_0062 62208 - 61702 - | flavodoxin Msm_0063 62376 - 63017 + | hypothetical protein Msm_0064 63014 - 63481 + | hypothetical protein Msm_0065 64176 - 63505 - | hypothetical protein Msm_0066 65198 - 64182 - | N-acetylglucosamine-1-phosphate transferase Msm_0067 65476 - 66351 + | hypothetical protein Msm_0068 66879 - 66751 - | hypothetical protein Msm_0069 67609 - 67139 - | hypothetical protein Msm_0070 69192 - 67615 - | hypothetical protein TERM 39 68061 - 68078 + g 91 -7.1 -5.19916 | TCATTAAAGTAGGAG CCATATT TTCA AATATGG TTTTTTCAATATTTT metG 71199 - 69217 - | methionyl-tRNA synthetase Msm_0072 73020 - 71464 - | putative exonuclease SBCC TERM 40 74461 - 74449 - g 75 -4.9 -5.09895 | TACGGACGTAAAAAA TATCA AAT TGATA ATAAAAAAGATTAAA Msm_0073 73150 - 74475 + | DNA primase large subunit TERM 41 74480 - 74470 - T 75 -4 -5.56673 | opp_overlap 74470 ATTGATAATAAAAAA GATT AAA AATC ATTATCCATCTGTTT Msm_0074 74990 - 74472 - | hypothetical protein Msm_0075 75092 - 76066 + | DNA primase small subunit Msm_0076 76072 - 76329 + | hypothetical protein Msm_0077 76884 - 76324 - | thymidylate kinase Msm_0078 77557 - 76889 - | dolichol kinase Msm_0079 78727 - 77576 - | CofH protein (7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO)/F420 biosynthesis) TERM 42 78414 - 78424 + g 72 -2.4 -5.44119 | opp_overlap 78414, overlap 78423 GCTCCTTTGTCAACA GCCC CCT GAGC TTTTTTTAAAATAGC Msm_0080 78877 - 79383 + | sulfopyruvate decarboxylase, comD Msm_0081 79388 - 79924 + | sulfopyruvate decarboxylase, ComE TERM 43 79953 - 79926 - T 86 -9.4 -4.23207 | opp_overlap 79926 79931 TAAAAAGTATATAAA TTAAATGAATCT ATTC AGACTCATTTAA TTCCTTAATTTTCTT Msm_0082 82242 - 79936 - | heterodisulfide reductase, subunit A, HdrA Msm_0083 83183 - 82242 - | heterodisulfide reductase, subunit B, HdrB Msm_0084 83772 - 83164 - | heterodisulfide reductase, subunit C, HdrC TERM 44 83803 - 83815 + r 73 -4.9 -5.08483 | opp_overlap 83803 TATAATTTAAATTCA TGATT TTT AATCA TTTTCTTTAATTTTA Msm_0085 85034 - 83787 - | putative ferredoxin Msm_0086 85774 - 85067 - | (2R)-phospho-3-sulfolactate synthase, ComA TERM 45 86086 - 86065 - g 71 -3 -5.14626 | overlap 86026 86066 AGTATCAAAATAAAA GCTCCATA TGAATT TATGGAGT CAAAACAATTTAAAC TERM 46 86472 - 86450 - g 100 -13.6 -3.86684 | opp_overlap 86445 AGAATTTATATCAAA TTTATGGAGC AGG GCTCCATAAA ATACGATTTGATTTA TERM 47 86791 - 86779 - g 80 -7.7 -4.26188 | overlap 86785 GGCACAGACTTAAAA CACGA ATA TCGTG AAGCCATCGATAAAT Msm_0087 86044 - 87261 + | putative transposase TERM 48 87849 - 87833 - g 71 -2.9 -5.14563 | overlap 87834 GTGCTGAGTAAAAAA GCATCAG TAG CTGACGG GCTTGCTACCAAAAT Msm_0088 87323 - 88039 + | hypothetical protein Msm_0089 88045 - 88824 + | pyrroline-5-carboxylate reductase (NADP oxidoreductase, coenzyme F420-dependent), ProC Msm_0090 88951 - 89238 + | hypothetical protein Msm_0091 89335 - 90711 + | 2,3-diphosphoglycerate synthase (putative GTPase) TERM 49 90823 - 90806 - g 77 -4.2 -5.41359 | AATGAAATGAAAAAA GATAAG AAGAAA CTTATC GTCATGCTGTTAATA Msm_0092 90797 - 91408 + | putative adhesin-like protein TERM 50 91466 - 91432 - T 85 -3.1 -6.38039 | opp_overlap 91436 91437, overlap 91436 91437 GATTTAAAAAAAAAA TAAAG-CTCAGGAATTA GAA TAAT-CCTGAGTCTTTT AATGCTTGTTCAAAT TERM 51 91461 - 91436 - T 75 -4.1 -5.5319 | gap 1, opp_overlap 91436 91437, overlap 91432 91437 TAAAAAAAAAATAAA GCTCAGGAATTA GAA TAAT-CCTGAGT CTTTTAATGCTTGTT TERM 52 91437 - 91460 + T 73 -7.6 -3.78529 | gap 1, opp_overlap 91436 91432 91437, overlap 91436 AAAAAAAAAATAAAG CTCAGGAATTA GAA TAAT-CCTGAG TCTTTTAATGCTTGT TERM 53 91460 - 91437 - T 73 -7.6 -3.86424 | gap 1, opp_overlap 91437 91436, overlap 91436 91432 AAAAAAAAAATAAAG CTCAGGAATTA GAA TAAT-CCTGAG TCTTTTAATGCTTGT Msm_0093 92710 - 91445 - | hypothetical protein TERM 54 92643 - 92623 - G 70 -6.3 -4.23379 | overlap 92617 AAGGTAAAATAATAA TTGCTATTA TTG TAATAACAA CAGCCGGATTTTTAA Msm_0094 93314 - 92724 - | TetR family transcriptional regulator TERM 55 93261 - 93285 + g 77 -8.7 -3.60562 | opp_overlap 93260 93261 93266, overlap 93266 TTCTTTATCTAAAAG GAATATTGTTG CAT CAACAATTTTC TGTTCTGTTTTATCT TERM 56 93285 - 93261 - G 72 -8.7 -3.10597 | opp_overlap 93261 93266, overlap 93260 93266 TTCTTTATCTAAAAG GAATATTGTTG CAT CAACAATTTTC TGTTCTGTTTTATCT TERM 57 93266 - 93280 + g 86 -7.2 -4.80729 | opp_overlap 93261 93260 93266, overlap 93261 TATCTAAAAGGAATA TTGTTG CAT CAACAA TTTTCTGTTCTGTTT TERM 58 93338 - 93317 - H 76 -8.9 -3.33261 | opp_overlap 93318 GTTCAATTTCCATAA TGTAAGTAA GTAC TTACTTACA TATAAATGTTTAGTT TERM 59 93837 - 93819 - g 76 -7.4 -4.27467 | GCAGAAGCGAAGAAA TCAACCAG TCA CTGGATGA TGCCAAAAAGCTCAC Msm_0095 93407 - 94123 + | phosphotransacetylase Msm_0096 94180 - 94944 + | undecaprenyl pyrophosphate synthase, UppS Msm_0097 94950 - 95711 + | Mg-dependent DNase, TatD Msm_0098 96076 - 95708 - | hypothetical protein Msm_0099 96596 - 96102 - | hypothetical protein Msm_0100 96985 - 96593 - | hypothetical protein TERM 60 96858 - 96844 - G 70 -6.4 -4.22652 | CCAGATTATCCAAAA TCAACC TGT GGCTGA AACTTGATTCGATAT Msm_0101 97103 - 97855 + | precorrin-3 methylase, CbiF TERM 61 97841 - 97873 + T 77 -6.5 -4.55625 | opp_overlap 97841 97843, overlap 97843 GATCCAAACTTTAAA CATGAATATAGATAA TTT TTAACTATATTCATC TTTTATACTGTTCAT TERM 62 97871 - 97843 - T 78 -9.1 -3.43919 | opp_overlap 97841 97843, overlap 97841 TCCAAACTTTAAACA TGAATATAGATAA TTT TTAACTATATTCA TCTTTTATACTGTTC TERM 63 97843 - 97871 + T 82 -9.1 -3.87977 | opp_overlap 97843 97841, overlap 97841 TCCAAACTTTAAACA TGAATATAGATAA TTT TTAACTATATTCA TCTTTTATACTGTTC Msm_0102 98803 - 97859 - | methionine synthase Msm_0103 99117 - 98812 - | hypothetical protein Msm_0104 99574 - 99122 - | hypothetical protein TERM 64 99315 - 99328 + g 71 -6.7 -4.04206 | opp_overlap 99315 99314 AAAGTTACAAAATAG GATGC TGCT GCATC TTTATGTACAAATCC Msm_0105 100684 - 99590 - | hypothetical protein TERM 65 100839 - 100816 - R 73 -4 -5.34365 | opp_overlap 100813 100816 CCATAATAATAAAAA CTAAATATAA TATA TAATATTTAG TTGTTTTTAATATAA Msm_0106 101897 - 100857 - | hypothetical protein Msm_0107 102552 - 101899 - | hydrogenase expression/formation protein, HypB hypA 102946 - 102569 - | hydrogenase nickel incorporation protein TERM 66 102893 - 102911 + g 82 -7.5 -4.51994 | TGCATTGTTACTTTC TGCAGTA TCTAT TACTGCA TTTATTATTCCTTGA Msm_0109 103307 - 103098 - | hypothetical protein Msm_0110 104345 - 103374 - | transposase TERM 67 103778 - 103789 + g 77 -3 -5.58454 | TAAAAGTTTTTAATT GTTT ATTT AAAC TTTTTTTAGTATGAA TERM 68 103971 - 103952 - G 70 -7.2 -3.62096 | opp_overlap 103952 CTTCAGTATCGTAAA TTGCATCG GCTA CGATACAA TTTGAAATAGAATCA Msm_0111 104594 - 104400 - | hypothetical protein TERM 69 104816 - 104800 - R 76 -5.3 -5.24551 | opp_overlap 104800 TTAAACGAAGAAAAA TAAAATA AAT TATTTTA ATTCTAACCATAATT Msm_0112 107409 - 104809 - | EIF-4a family ATP-dependent RNA helicase TERM 70 108309 - 108293 - g 74 -2.3 -5.54192 | ATGAATTGAAAAAAA GAAATAT TAT AGATTTC CCAATGCTTGAATTT Msm_0113 107566 - 110025 + | DNA helicase TERM 71 110097 - 110111 + G 74 -5.7 -4.65168 | GAATATAGTTTAACT GGAGA TTTGC TCTCC TTTTTAACCTGTAAT Msm_0114 110043 - 111269 + | hypothetical protein Msm_0115 111294 - 111968 + | hypothetical protein Msm_0116 112613 - 111954 - | MobA-related protein Msm_0117 113843 - 112659 - | hypothetical protein Msm_0118 115209 - 113929 - | peptide ligase TERM 72 115240 - 115218 - H 75 -2.8 -5.93809 | opp_overlap 115229 CTTTCATAAAAAAAA TACCTTTATA TTT TATAACAGTA TAAACTATTGTTATT Msm_0119 115303 - 115704 + | nuclease TERM 73 115760 - 115733 - T 100 -7.2 -6.11644 | opp_overlap 115739, overlap 115750 TCACTTAAAAAAAAA TAAAAAGTATCT AATT AGATACTTTTGA AATACCATTATTTTT Msm_0120 118496 - 115743 - | purine NTPase involved in DNA repair, Rad50 TERM 74 116710 - 116726 + g 74 -5.9 -4.61868 | opp_overlap 116710 TTACTGCTTAAAACA TCAAGAG CTC CTTTTGA TTTTATGTATGCATC Msm_0121 119716 - 118493 - | DNA repair exonuclease Rad32 TERM 75 118615 - 118626 + g 81 -4.4 -5.42198 | GCCTAATCAAGTCCT CAGA TTCC TCTG TTTTATTTTTTGAAA Msm_0122 121357 - 119846 - | ATPase TERM 76 120812 - 120800 - G 73 -7.7 -3.58343 | opp_overlap 120800 TTCACCATTTGTAAA TGTGG CAT CCACA TATTCCCCATGCATA Msm_0123 122434 - 121376 - | hypothetical protein TERM 77 122116 - 122094 - G 81 -10 -3.03771 | overlap 122096 TTATATTCTTCAAGA GAGCTTAAAC AGC ATTTAAGCTC AAAAATAGACATGTA Msm_0124 123248 - 122496 - | geranylgeranylglyceryl phosphate synthase-like protein rpl40e 123592 - 123446 - | 50S ribosomal protein L40e TERM 78 123891 - 123866 - R 81 -6.3 -5.11254 | opp_overlap 123881, overlap 123881 AATAATAAAAAGAAA GAATCCAAAAA TTAT TCTTTAGATTC TAAAAATTCATTTTG Msm_0126 124392 - 123877 - | hypothetical protein Msm_0127 125067 - 124393 - | hypothetical protein Msm_0128 125199 - 125915 + | hypothetical protein Msm_0129 125921 - 126460 + | nicotinamide-nucleotide adenylyltransferase TERM 79 126625 - 126604 - g 70 -4.5 -4.84642 | TGGAAAGGAAGAAAA TATGAACCT TGAA AAGCTCATA TTAACTACTCCAGAT Msm_0130 126464 - 126901 + | molybdenum cofactor biosynthesis protein, MoaE TERM 80 127093 - 127107 + F 76 -4.4 -5.42975 | AATTAAATTCATTTT TTTAAA GTT TTTAAA TTTTTATTTATATCA Msm_0131 127252 - 127461 + | molybdenum-binding protein, MopI Msm_0132 127596 - 128081 + | hypothetical protein Msm_0133 128501 - 128082 - | thioesterase, FcbC TERM 81 128553 - 128535 - R 100 -6.1 -6.11019 | opp_overlap 128535 128547 AAAAATTAAAAAAAA GCTATAA TGAAT TTATAGC TTCTGTAATTAATTG Msm_0134 129567 - 128536 - | M42 glutamyl aminopeptidase/endo-glucanase Msm_0135 130714 - 129635 - | coenzyme F420-reducing hydrogenase, beta subunit TERM 82 130925 - 130903 - H 71 -3.6 -5.38348 | AAAAATATTAAAAAA TATTTAAACA ACA CATTTAAATA TACATAATAATTAAC Msm_0136 130962 - 131738 + | putative ferredoxin TERM 83 131738 - 131758 + T 100 -11.3 -5.20154 | opp_overlap 131743, overlap 131743 TGAATTTTATTTATA GAAAATAGC CAT GCTATTTTC TTTTTTAAATTCTGT TERM 84 131743 - 131753 + T 84 -5.4 -5.43553 | opp_overlap 131743, overlap 131738 TTTATTTATAGAAAA TAGC CAT GCTA TTTTCTTTTTTAAAT TERM 85 131753 - 131743 - T 71 -5.4 -4.55287 | opp_overlap 131738 131743 TTTATTTATAGAAAA TAGC CAT GCTA TTTTCTTTTTTAAAT Msm_0137 133286 - 131763 - | putative flagellar protein D/E Msm_0138 134418 - 133363 - | exonuclease TERM 86 134557 - 134523 - H 75 -8.9 -2.98842 | overlap 134522 GATACAATATTAAAT TGACTACTAATAA ACTCAGCAA TTATTAGTAGTCA GAGATAGATAAAAAA Msm_0139 134771 - 135154 + | hypothetical protein TERM 87 135704 - 135693 - g 77 -3 -5.54264 | opp_overlap 135693 AAACAGGCAAAAAAA CAAT CACA ATTG ATTTAAATCCTTTAT Msm_0140 135167 - 135901 + | hypothetical protein Msm_0141 135917 - 136459 + | dephospho-CoA kinase, CoaE Msm_0142 137142 - 136462 - | ATPase TERM 88 137070 - 137052 - G 71 -6.8 -4.05747 | opp_overlap 137052, overlap 137055 CAGATTTCATAGAAA GAAGATAT TTA ACATCTTC TCCTGTTTCTAAAGC Msm_0143 137955 - 137149 - | hypothetical protein Msm_0144 138821 - 138072 - | hypothetical protein Msm_0145 139278 - 138850 - | hypothetical protein Msm_0146 140149 - 139280 - | type IV leader peptidase TERM 89 139367 - 139349 - G 72 -7.4 -3.81691 | overlap 139343 139350 139360 AACAGATATCAAGAA TCCTGCAA ATA TTGCAGGT GCAAACGGAAATCCT TERM 90 139366 - 139350 - G 83 -10.9 -2.8793 | overlap 139343 139349 139360 ACAGATATCAAGAAT CCTGCAA ATA TTGCAGG TGCAAACGGAAATCC Msm_0147 141851 - 140235 - | CTP synthetase TERM 91 142084 - 142061 - R 84 -6 -5.27335 | TTTTTTAAACAAAAA TCAGAAGAGC AAAA ACTCTCCCGA TAGTAAAATTTATAG Msm_0148 143253 - 142123 - | aldo/keto reductase family oxidoreductase Msm_0149 144060 - 143269 - | acetylesterase Msm_0150 144611 - 144429 - | hypothetical protein Msm_0151 144761 - 144630 - | hypothetical protein Msm_0152 146204 - 144840 - | Na(+)-driven multidrug efflux pump NorM TERM 92 146256 - 146233 - R 72 -2.6 -5.7506 | gap 1, opp_overlap 146237, overlap 146237 TAAAAAAAAATAAAA TTATTGTTGCA AAT TACAACA-TAA ATTATAAATTTCCAG Msm_0153 147561 - 146329 - | cofactor-independent phosphoglycerate mutase Msm_0154 148608 - 147589 - | homoserine dehydrogenase Msm_0155 149101 - 148616 - | allosteric regulator of homoserine dehydrogenase TERM 93 148962 - 148972 + g 80 -5.4 -5.18355 | AGAGTAAGCTGAACC GGAA TCA TTCC TTTTTCATTTTTAGA gatC 149328 - 149113 - | aspartyl/glutamyl-tRNA amidotransferase subunit C Msm_0157 149654 - 149346 - | type I restriction-modification enzyme, subunit S Msm_0158 150394 - 149795 - | type I restriction-modification system methylase, subunit S TERM 94 150483 - 150514 + G 74 -6.8 -4.33956 | opp_overlap 150491 150503, overlap 150489 TGATTAATAGATATG CTAGATGATTTATT ATGC AATAAATCTTTTAG TTTGTATGTTTTCCA TERM 95 150489 - 150508 + G 79 -6.6 -4.66057 | opp_overlap 150491 150503, overlap 150483 ATAGATATGCTAGAT GATTTATT ATGC AATAAATC TTTTAGTTTGTATGT TERM 96 150904 - 150894 - g 70 -8.2 -3.10255 | opp_overlap 150893 ATAACAGCTATTGAA CCGG TAA CCGG ATTAGATATGGGGTA Msm_0159 150480 - 150941 + | adhesin-like protein TERM 97 150955 - 150939 - T 72 -8.1 -3.54459 | opp_overlap 150939 GTAACTGTCCTTAAA TAGAGTT TTA AACTCTA TTTTAAATACTCCTC TERM 98 150939 - 150955 + T 79 -8.1 -4.21908 | opp_overlap 150939 GTAACTGTCCTTAAA TAGAGTT TTA AACTCTA TTTTAAATACTCCTC Msm_0160 152380 - 150953 - | asparagine synthetase, AsnB TERM 99 151232 - 151188 - G 75 -5 -5.08824 | gap 1, overlap 151192 TTCTTATCTAAAAAA GGAAGACGCA-GCTCAACGCC ATTT GCCATTGAGCATGCATCATCA CGTTCCAGATTAACA TERM 100 151228 - 151192 - G 79 -8.8 -3.94773 | gap 1, overlap 151188 TATCTAAAAAAGGAA GACGCA-GCTCAACGCC ATTT GCCATTGAGCATGCATC ATCACGTTCCAGATT Msm_0161 153491 - 153363 - | hypothetical protein TERM 101 154132 - 154155 + r 87 -9.7 -4.52347 | TCTTATTTTTAACTT GTACATGCA TTGTCC TGCATGTAC TTTTAATGTTATTTC Msm_0162 154434 - 154300 - | hypothetical protein TERM 102 155633 - 155607 - R 71 -3.2 -5.61824 | overlap 155610 155623 TAAAACTTAAAAAAA TAATCAAAAAAT AAA ATTTTTTAAATA GCTAAAAAATAATCA TERM 103 155630 - 155610 - R 70 -4.9 -4.83715 | overlap 155607 155623 AACTTAAAAAAATAA TCAAAAAAT AAA ATTTTTTAA ATAGCTAAAAAATAA Msm_0163 155995 - 155732 - | putative DNA repair protein Msm_0164 156968 - 156000 - | putative DNA repair protein Msm_0165 157489 - 156983 - | exonuclease Msm_0166 159694 - 157490 - | helicase TERM 104 159586 - 159562 - G 100 -7.9 -5.65678 | ATAAAATATAAAAAA GATGTTCCCAA AAA TCAGGAACACC ACATATTTTAGGAAC Msm_0167 160323 - 159703 - | putative DNA repair protein TERM 105 159783 - 159772 - G 74 -3 -5.39221 | opp_overlap 159764, overlap 159764 AGAATAATCAAAAAA TTGA TTCA TCAA TAGATATGGTTTGGT Msm_0168 161310 - 160324 - | putative DNA repair protein Msm_0169 162671 - 161313 - | putative CRISPR-associated protein Msm_0170 163006 - 163734 + | putative DNA repair protein TERM 106 163781 - 163755 - T 100 -7.4 -6.4275 | opp_overlap 163757, overlap 163757 TAAAAATAAAAAAAA GAGTTAAGAGAA GAT TTCTCCTAACTG ATTGTAATTTTATTT TERM 107 163779 - 163757 - T 95 -10 -4.77908 | opp_overlap 163757, overlap 163755 AAAATAAAAAAAAGA GTTAAGAGAA GAT TTCTCCTAAC TGATTGTAATTTTAT Msm_0171 166087 - 163775 - | hypothetical protein Msm_0172 166519 - 166647 + | hypothetical protein Msm_0173 175517 - 166878 - | adhesin-like protein TERM 108 167860 - 167875 + g 80 -5.4 -5.20216 | GCTAAATCAACAATC CAGGTA ATTA TGCCTG TTTTTTCATCATATG TERM 109 168011 - 168027 + g 73 -8.1 -3.39289 | opp_overlap 167984 168007 AGGTTACATTATCAC CGAAATT AGG AATTTCG TTGTCAACTGTTTTG TERM 110 171287 - 171313 + g 93 -8.8 -4.86731 | opp_overlap 171284, overlap 171284 TGTTGGGAATAATTT CAGGTACTGTAA TGT TTACAGAACTTG TTTTATTTCCGACAG TERM 111 172895 - 172913 + g 70 -7.4 -3.67297 | opp_overlap 172898, overlap 172898 TTACATCTTTTGTAG GAACTACC TTA GGCAGTTC TTGTATGTATATGGT TERM 112 174598 - 174580 - G 72 -6 -4.38154 | ATATTGCCTATAAAA GTACAGTT ATA AACAGTAC TTCCAGGTCTGAAAC TERM 113 176908 - 176898 - g 71 -5.4 -4.56314 | TGAAGATAATGAAAA CCAT GAA ATGG CTGAAAAATACTTAA Msm_0174 175918 - 177204 + | O-acetylhomoserine sulfhydrylase (PLP-dependent), MET17 Msm_0175 178697 - 177222 - | homoserine O-acetyltransferase, MetX TERM 114 177329 - 177371 + g 72 -7.1 -3.89368 | gap 1 TATCCAATTTTCTCA TTCTG-CGTGCTGTTGATTC AATA GAATCGTCTGCATGACAGAA TTTAACTGTTTTTGT TERM 115 178162 - 178184 + g 79 -4.8 -5.243 | TGCGGTGAAGATCTT GCTGTTGTAG CTA TTGCAACTGC TTTTTTCATCATTTC Msm_0176 179378 - 178707 - | ribonuclease III (dsRNA-specific), Rnc TERM 116 178747 - 178766 + g 88 -3.5 -5.93252 | TTCATAGCCTGTTTT GAAGCAG CCTGTT CAGCTTC TTTTTTGTTTTTACC TERM 117 179672 - 179660 - g 82 -7.7 -4.68446 | opp_overlap 179659 179660 AAAAACTAGATAAAA CCGTT AAA AACGG ATATTCACTTGTTGG TERM 118 179783 - 179773 - g 71 -3.2 -5.2189 | GGAAGTACCAAAAAA TCCC AGC AGGA CTACAGACTATTCCG Msm_0177 179560 - 179910 + | hypothetical protein Msm_0178 180518 - 180105 - | hypothetical protein TERM 119 180327 - 180317 - G 70 -4.6 -4.84527 | TCGACAGATTAAAAA CCGG CGT CCAG GTATCAACCATCAGA Msm_0179 181067 - 180675 - | hypothetical protein Msm_0180 181506 - 181081 - | hypothetical protein rpl37e 181905 - 181738 - | 50S ribosomal protein L37e Msm_0182 182215 - 181985 - | small nuclear ribonucleoprotein TERM 120 182622 - 182610 - H 81 -6.3 -4.96388 | AATTATTAAAGAAAA TTCAG CAT CTGAA AAACAAATCAGTGCA Msm_0183 182740 - 183222 + | RNA-binding protein Msm_0184 183236 - 183928 + | creatinine amidohydrolase Msm_0185 184229 - 183942 - | hypothetical protein Msm_0186 184384 - 184986 + | hypothetical protein Msm_0187 185117 - 184998 - | rubredoxin Msm_0188 185323 - 185165 - | rubredoxin Msm_0189 186049 - 185435 - | acetyl/acyl transferase related protein Msm_0190 186159 - 187190 + | ATPase Msm_0191 187211 - 187432 + | hypothetical protein Msm_0192 188814 - 187429 - | argininosuccinate lyase TERM 121 188909 - 188898 - R 74 -3 -5.85178 | opp_overlap 188898 188891 AATAGTTAAAAAAAA GATT GTTT AATC TTTTTTCATTTCAGT Msm_0193 189059 - 188904 - | ribosomal protein S27ae rps24e 189378 - 189070 - | 30S ribosomal protein S24e TERM 122 189218 - 189231 + g 71 -5.3 -4.63993 | opp_overlap 189218 TGAGGTTGTACATTA TCTAC AACA GTAGA TTCTTTTTTAGAATT Msm_0195 189901 - 189392 - | hypothetical protein TERM 123 189678 - 189689 + g 77 -3 -5.67283 | TCTGCCTTGATAACT TCAT GATT ATGA TTTTTTCTTTGAATT Msm_0196 190089 - 189913 - | DNA-dependent RNA polymerase, subunit E, RpoE Msm_0197 190643 - 190086 - | DNA-directed RNA polymerase subunit E' Msm_0198 191070 - 190663 - | inorganic pyrophosphatase Msm_0199 191630 - 191238 - | hypothetical protein TERM 124 191435 - 191461 + g 74 -6.1 -4.43755 | gap 1, opp_overlap 191425 AAGAATTAGCTAACT TTAGAGCTAAAT CTGC ATTTAGC-CTAA TTTTACCTTTATTAT Msm_0200 192854 - 191640 - | translation initiation factor IF-2 subunit gamma TERM 125 192932 - 192904 - R 79 -6.9 -4.43272 | opp_overlap 192907 192913, overlap 192907 192913 ACTTAAAAGTTAAAA TAAGAAAAATAGT AAA ACTATTCTTCTTC CTCTTCATCGCCAAC TERM 126 192929 - 192907 - R 81 -8.6 -4.31549 | opp_overlap 192907 192913, overlap 192904 192913 TAAAAGTTAAAATAA GAAAAATAGT AAA ACTATTCTTC TTCCTCTTCATCGCC TERM 127 192923 - 192913 - R 73 -4 -5.4593 | opp_overlap 192907 192913, overlap 192907 192904 TTAAAATAAGAAAAA TAGT AAA ACTA TTCTTCTTCCTCTTC Msm_0201 193307 - 192921 - | 30S ribosomal protein S6e Msm_0202 195139 - 193349 - | translation initiation factor IF-2 Msm_0203 195609 - 195157 - | nucleoside diphosphate kinase, Ndk TERM 128 195332 - 195348 + g 72 -5.9 -4.49311 | opp_overlap 195332 TCTGCTTCTAAAGGA TTGGTTG CTC CAACTAA TTTTCTGATAGTACT Msm_0204 195767 - 195606 - | 50S ribosomal protein L24e rps28e 195988 - 195782 - | 30S ribosomal protein S28e rpl7ae 196392 - 196021 - | 50S ribosomal protein L7Ae TERM 129 196438 - 196462 + H 81 -10.3 -3.32333 | opp_overlap 196440 CCATCCATCGGCAGA TATTATAATTC CTT GAATTATAATA TTCGTAATTATATAT TERM 130 196460 - 196440 - H 72 -8.5 -2.88663 | opp_overlap 196438 ATCCATCGGCAGATA TTATAATTC CTT GAATTATAA TATTCGTAATTATAT Msm_0207 196958 - 197482 + | DNA-binding protein Msm_0208 197496 - 197783 + | DNA-binding protein Msm_0209 197816 - 197995 + | ferredoxin TERM 131 198245 - 198230 - g 95 -5.4 -6.23209 | opp_overlap 198230, overlap 198232 CTAACCAAAAAAAAA TACTGG TGGA CCAGCA TATTTATTGCAGGTT TERM 132 198243 - 198232 - g 78 -5.8 -4.74676 | opp_overlap 198230, overlap 198230 AACCAAAAAAAAATA CTGG TGGA CCAG CATATTTATTGCAGG Msm_0210 198130 - 198315 + | hypothetical protein Msm_0211 198293 - 198481 + | hypothetical protein Msm_0212 199615 - 198701 - | hypothetical protein TERM 133 199938 - 199915 - R 84 -7.6 -4.84921 | opp_overlap 199935, overlap 199935 TATAATAAAAAAGAA GATAGCAATT AAAA AATTACTATC TAAAACAGATACTTA Msm_0213 200161 - 199964 - | histone, HMtA Msm_0214 201616 - 200420 - | threonine synthase Msm_0215 202320 - 201661 - | hypothetical protein Msm_0216 203297 - 202320 - | tryptophanyl-tRNA synthetase Msm_0217 204032 - 203517 - | tRNA-splicing endonuclease subunit alpha TERM 134 204135 - 204119 - R 89 -5.9 -5.48106 | AGAAAAAAAAAGAAA TAAGAGC TAA ACTCTTA TAAAAATATTATTTG Msm_0218 204835 - 204125 - | iron dependent transcriptional regulator (Fe2+-binding) TERM 135 204970 - 204943 - R 84 -7.2 -5.04908 | opp_overlap 204950, overlap 204944 AAAATAAAAAAAGAA GTATTAACTCAA AAAA TTGAGTTAATAA GGTAAAACATCATAA TERM 136 204969 - 204944 - R 88 -10.7 -3.57454 | opp_overlap 204950, overlap 204943 AAATAAAAAAAGAAG TATTAACTCAA AAAA TTGAGTTAATA AGGTAAAACATCATA Msm_0219 209454 - 204964 - | cysteine protease TERM 137 209890 - 209871 - R 100 -8 -6.28401 | TAAAAAATAAAAAAA GATGTAAA TAAT TTTACATC ATAGGTGGCATTCCA Msm_0220 211539 - 209884 - | thermosome subunit alpha TERM 138 209962 - 209980 + g 72 -7.4 -3.83169 | AGCATCATTTCCGGA CTCGTCAG GAC CTGAAGAG TTTAATGCATTTCTA Msm_0221 211730 - 212740 + | adhesin-like protein TERM 139 212762 - 212783 + T 86 -8.9 -4.48073 | opp_overlap 212761 212767 AATAAAATTAAATTT TGAAAGTTT ATAA AAACTTTCA TTCTTATTTTTTTAA Msm_0222 214051 - 212828 - | flavoprotein FpaA Msm_0223 214258 - 214413 + | hypothetical protein Msm_0224 214511 - 214909 + | hypothetical protein TERM 140 215554 - 215528 - g 77 -4.6 -5.24989 | GTAGATATTAAAAAA GTATTTGAAA AATTAAA TTCCAAATAC TAATCATCATAATAT Msm_0225 214916 - 215557 + | hypothetical protein Msm_0226 215754 - 215554 - | hypothetical protein Msm_0227 216958 - 215756 - | hydroxymethylglutaryl-CoA (HMG-CoA) reductase, HmgA Msm_0228 217819 - 216959 - | succinyl-CoA synthetase subunit alpha Msm_0229 218560 - 217835 - | hypothetical protein TERM 141 218613 - 218595 - R 81 -6.2 -4.98911 | opp_overlap 218595 218595 GATTATAAAAATAAA TAAAATAA TTT TTATTTTA TTGTTATATATTATG Msm_0230 219887 - 218670 - | putative transposase TERM 142 219140 - 219152 + g 80 -7.7 -4.26188 | overlap 219128 ATTTATCGATGGCTT CACGA TAT TCGTG TTTTAAGTCTGTGCC TERM 143 219459 - 219481 + g 100 -13.6 -3.86684 | opp_overlap 219453 TAAATCAAATCGTAT TTTATGGAGC CCT GCTCCATAAA TTTGATATAAATTCT TERM 144 219845 - 219866 + g 71 -3 -5.14626 | overlap 219846 219861 GTTTAAATTGTTTTG ACTCCATA AATTCA TATGGAGC TTTTATTTTGATACT Msm_0231 220075 - 220749 + | 3-dehydroquinate dehydratase TERM 145 220762 - 220781 + G 79 -5.1 -5.14626 | TAGGTGATTAGAATG GCTAAAA AATGTA TTTTAGC TTTTATTTTAATAAT Msm_0232 220759 - 221373 + | signal peptidase I Msm_0233 221743 - 221405 - | nitrogen regulatory protein P-II, GlnK TERM 146 221665 - 221686 + g 77 -8.1 -3.81926 | gap 1, overlap 221670 CAGAAACATTCATTC CTTGACAGCC CAC GGCTGT-AAG TTCATTTTTAACGTC TERM 147 221670 - 221682 + g 72 -9.1 -2.68305 | overlap 221665 ACATTCATTCCTTGA CAGCC CAC GGCTG TAAGTTCATTTTTAA Msm_0234 222972 - 221755 - | ammonium transporter TERM 148 222160 - 222148 - G 80 -7.7 -4.33755 | AGGAACATCAACAAA TCCTG CTG CAGGA GTAATAGCTACTAAA TERM 149 222267 - 222257 - G 71 -6.8 -4.04174 | opp_overlap 222259 GTCCAGACAATTAAA GCTG CTG CAGC TGCAACATTTGAAAC TERM 150 223058 - 223082 + H 72 -8.5 -2.98015 | opp_overlap 223052 223057 TTGATTAAACGGAAG TCGGAAGTCGG AAT CCTTCTTCCGA TATATAGTAGTTGAA TERM 151 223256 - 223237 - H 79 -4.4 -5.67711 | overlap 223239 TAAATAAAAGAAAAA TCTGAATT TGTA AATTCAAA AAGGAAAAATGTGTT Msm_0235 223275 - 223589 + | hypothetical protein Msm_0236 223595 - 224821 + | HD superfamily phosphohydrolase Msm_0237 224831 - 225379 + | 3-polyprenyl-4-hydroxybenzoate decarboxylase, UbiX Msm_0238 225380 - 225943 + | precorrin-6B methylase, CbiT Msm_0239 225965 - 226720 + | hypothetical protein Msm_0240 226732 - 227346 + | molybdopterin-guanine dinucleotide biosynthesis protein A, MobA Msm_0241 228131 - 227343 - | exosome complex RNA-binding protein Rrp42 TERM 152 227925 - 227911 - G 86 -10 -3.67068 | opp_overlap 227921, overlap 227903 ATTAAAACTCCCAAA TCCGGA GTA TCCGGA AATGGTGCACCAATT Msm_0242 228837 - 228133 - | exosome complex exonuclease Rrp41 Msm_0243 229758 - 228862 - | exosome complex RNA-binding protein Rrp4 Msm_0244 230490 - 229789 - | putative RNA-associated protein TERM 153 230300 - 230313 + g 74 -6.7 -4.24562 | opp_overlap 230300 AATATTTTAAGCATA GCTTC TTCA GAAGC TTTATCTCCTTTTTT Msm_0245 231270 - 230518 - | proteasome subunit alpha TERM 154 230954 - 230966 + g 72 -3.4 -5.18866 | TCTACCCTAATAGGT TCAC TGTAT GTGA TTTTATTTATTTGAG TERM 155 231373 - 231400 + r 70 -7.2 -3.6951 | overlap 231365 231372 231377 TTCTCCATGAAATGG TATTTCATTACA TATC TGTAATGATATA GTTTTTTAAATCTTT TERM 156 231377 - 231396 + r 71 -8 -3.25779 | overlap 231365 231373 231372 CCATGAAATGGTATT TCATTACA TATC TGTAATGA TATAGTTTTTTAAAT TERM 157 231783 - 231809 + r 70 -8 -3.11584 | opp_overlap 231784, overlap 231781 231786 ATAAAGTTAAATTTA AGTTTCACCTCT CCA AGAGGTGAATCA TGTGTTAAATCATAT TERM 158 231808 - 231784 - R 87 -11.5 -3.31853 | opp_overlap 231783 231781 231786 TAAAGTTAAATTTAA GTTTCACCTCT CCA AGAGGTGAATC ATGTGTTAAATCATA TERM 159 231786 - 231806 + r 90 -12.7 -2.76322 | opp_overlap 231784, overlap 231783 231781 AAGTTAAATTTAAGT TTCACCTCT CCA AGAGGTGAA TCATGTGTTAAATCA Msm_0246 232327 - 231965 - | ribonuclease P, subunit Rpp14 Msm_0247 233021 - 232317 - | ribonuclease P protein component 3 TERM 160 233138 - 233109 - R 100 -10.3 -5.66926 | TTAAAAAAAAGAAAA TAAATTTTTGTAG ACTA CTACAAAAATCTA AAAAATTCCCAATGG Msm_0248 233411 - 233136 - | hypothetical protein TERM 161 233287 - 233272 - G 79 -4.8 -5.25799 | AAAACAATATAAAAA TAATCT GCAG AGATTA AAAAGAACAATAAAA TERM 162 233636 - 233614 - R 100 -7.9 -6.12458 | CAAAAAAATAAAAAA TAAGTGATT GCAAT AATCACTTA AACAGAAACCGATGA Msm_0249 234353 - 233634 - | hypothetical protein TERM 163 234264 - 234276 + g 75 -4.9 -5.01042 | overlap 234229 234253 TGCAGGAACATGACT TAAAG TTC CTTTA TTTTTAATTTGACTT Msm_0250 234971 - 234363 - | hypothetical protein Msm_0251 235582 - 235049 - | hypothetical protein Msm_0252 237133 - 235769 - | Na+-driven multidrug efflux pump, NorM TERM 164 236812 - 236794 - G 73 -7.6 -3.61517 | opp_overlap 236782 AGGGTTCCTGAAGAA TTAACAAT ACA ATTGTTAA AACTACGGAAGCTAT TERM 165 236857 - 236836 - G 74 -2.3 -5.54894 | overlap 236837 AAGCTATTAAAAAAA TCAGCAA AGAATGTG CTGCTGA CTGACTGGCTTTCTT Msm_0253 237434 - 237141 - | hypothetical protein TERM 166 237372 - 237383 + g 74 -3 -5.4505 | ACAGTATAAGTATCT GTAA AATT TTAC TTTTTTATTAACAAG Msm_0254 237892 - 237689 - | hypothetical protein Msm_0255 238415 - 238702 + | transcription regulator Msm_0256 239977 - 238772 - | putative transposase TERM 167 240131 - 240106 - R 70 -4.1 -5.14819 | AAATTAAAAAACAAA TAAGCCTATAA AATT TTACAGACTCA AAAAAATTAATTTAA Msm_0257 241117 - 240143 - | hypothetical protein TERM 168 240307 - 240319 + g 82 -4.9 -5.47159 | TAGAATTATAATCCG GATTT TTT AAATC TTTTTTATATTGCAG TERM 169 240595 - 240579 - G 74 -5.9 -4.61147 | opp_overlap 240588, overlap 240580 CAATACCAGACAAAA CCTTCTA ATG TAGAAGA CTGCTTTACTTGAAA Msm_0258 242032 - 241127 - | hypothetical protein Msm_0259 242538 - 242029 - | hypothetical protein TERM 170 242233 - 242221 - G 74 -4.1 -5.1361 | overlap 242207 AGAAACTGCAAAAAA GAAAG CAG CTTCC ATTGCTAAAATTACT TERM 171 242419 - 242433 + g 86 -5.8 -5.3671 | opp_overlap 242417 242421, overlap 242404 242417 TGAATGCATGGAATT CATAAT TGA ATTATG TTTTTTAATTGTATT Msm_0260 244798 - 242540 - | RecJ-like exonuclease TERM 172 242767 - 242751 - G 79 -7.3 -4.371 | CTTATTACACCAAAA TCAGGAC CAT GTCCTAA AGTTATAATTGGTTT TERM 173 242903 - 242913 + g 80 -5.4 -5.1615 | GAAGTAAATGCCATT CTCA AAA TGAG TTTTTTCAATATTAG Msm_0261 245325 - 244828 - | hypothetical protein TERM 174 245561 - 245524 - R 82 -3 -6.19443 | opp_overlap 245528 245532, overlap 245528 245558 CACAGTAAAAAAAAA GAAATAAATTTTAAGA AAAGCA TCTTAAAATTTATTGG CTGGCCCAAAGGCCG TERM 175 245557 - 245528 - R 100 -8.2 -5.45056 | opp_overlap 245528 245532, overlap 245524 GTAAAAAAAAAGAAA TAAATTTTAAGA AAAGCA TCTTAAAATTTA TTGGCTGGCCCAAAG TERM 176 245528 - 245557 + r 70 -8.2 -3.05384 | opp_overlap 245524 245528, overlap 245532 GTAAAAAAAAAGAAA TAAATTTTAAGA AAAGCA TCTTAAAATTTA TTGGCTGGCCCAAAG Msm_0262 245947 - 245555 - | desulfoferrodoxin (dfx) Msm_0263 246509 - 246141 - | nitrogen fixation protein, NifU Msm_0264 247712 - 246525 - | cysteine desulfurase, NifS TERM 177 247057 - 247073 + g 79 -5.1 -5.24989 | opp_overlap 247055 247057 CCACCATGAATAAGA GGAGTTA TTC TAACACC TTTTTTAATATATAA Msm_0265 249044 - 247746 - | O-acetylhomoserine sulfhydrylase TERM 178 249357 - 249341 - R 81 -5.9 -4.94243 | opp_overlap 249341, overlap 249336 249335 TTAAAAAAAGTAAAA GAGAATT TGA AATCCTC TTTTTTAAGCAATTG Msm_0266 255559 - 249362 - | adhesin-like protein TERM 179 251996 - 252020 + g 71 -8.1 -3.18383 | AAAGTTGCTTTTTGC TTTAGTTAATT CCA AATTAGCTAAA TTAATAACTGCAGAT Msm_0267 255774 - 256298 + | NAD(P)H-dependent FMN reductase (multimeric flavodoxin) Msm_0268 257652 - 256306 - | cysteinyl-tRNA synthetase, CysS Msm_0269 258196 - 257813 - | transcriptional regulator Msm_0270 258919 - 258206 - | serine acetyltransferase, CysE TERM 180 258245 - 258263 + g 75 -2.5 -5.52384 | overlap 258251 TTCGTCTTCATCATC TTCAGTT AAACA AATTGAA TTTTTTTCATACAAA Msm_0271 259957 - 259010 - | cysteine synthase, CysK TERM 181 260071 - 260037 - R 86 -11.1 -3.1855 | opp_overlap 260039 260042 260042 260045 260049 260051, overlap 260042 260045 TTTTGGAATACCTAA TATAACAATAGTTAT TGTTT ATAACTACTGTTATA TAACAATGTTTTTAT TERM 182 260049 - 260079 + r 73 -4.3 -5.38958 | gap 1, opp_overlap 260045 260042 260037, overlap 260039 260042 260045 260042 260051 TAATATAACAATAGT TATTGTT-TATAAC TACT GTTATATAACAATG TTTTTATTTATAAAT Msm_0272 260738 - 260106 - | endonuclease III TERM 183 260377 - 260359 - G 72 -7.4 -3.81602 | TAAACCAGAACACAA TTGGCAGT TTT ACGGCCAA CACCAGGAAGCTCAA Msm_0273 262058 - 260742 - | 3-phosphoshikimate 1-carboxyvinyltransferase Msm_0274 262878 - 262150 - | SAM-dependent methyltransferase (cyclopropane fatty acid synthase-related) valS 265690 - 262973 - | valyl-tRNA synthetase Msm_0276 266140 - 266499 + | hypothetical protein pheT 266525 - 268186 + | phenylalanyl-tRNA synthetase subunit beta Msm_0278 268478 - 268296 - | hypothetical protein Msm_0279 268894 - 268481 - | hypothetical protein TERM 184 268963 - 268946 - R 79 -4.9 -5.3472 | overlap 268947 AAAAAACAAATAAAA CCTGTAA AATT TTACAGA CTCGAAAAATTAAGA Msm_0280 270469 - 269015 - | ATPase TERM 185 269598 - 269586 - G 79 -2.7 -5.79588 | TGAAAAGCAAAAAAA TTCAA AAT CTGAA AAGCAAGATATTGTG TERM 186 270491 - 270518 + r 76 -7.2 -4.15632 | opp_overlap 270491 270494, overlap 270494 GCCCCCTCAAAATAA TAACTATTACTA TATA TAGTCATAGTTA TTTATATATACTACT TERM 187 270518 - 270491 - R 76 -7.2 -4.17048 | opp_overlap 270491 270494, overlap 270494 GCCCCCTCAAAATAA TAACTATTACTA TATA TAGTCATAGTTA TTTATATATACTACT TERM 188 270720 - 270704 - R 74 -2.3 -5.94743 | opp_overlap 270704 TAAAAAAAAGAAAAA TGAAAAA ATG TTTATCA CATTTTATTTTTACG Msm_0281 272496 - 270718 - | putative adhesin-like protein TERM 189 273437 - 273427 - g 75 -2.6 -5.59534 | overlap 273435 AAGCATAATAAAAAA TAAT AAA ATTA CAAATGCTGTAAACC TERM 190 273449 - 273435 - g 72 -3.6 -5.22104 | overlap 273427 TAAAAAATAATAAAA TTACAA ATG CTGTAA ACCACGGTATTGACA TERM 191 274111 - 274097 - g 70 -4.2 -4.97158 | GGATATGAAACAAAA GGTGTT AAC AACTCC AATATTCCTTTAAAA TERM 192 274340 - 274318 - g 84 -6.4 -5.14645 | opp_overlap 274323 AGAATCCAATAAAAA CATAACAATT ACC AATTGTGATG TAAAAGGATCATCAT TERM 193 274406 - 274384 - g 74 -4.2 -5.31072 | overlap 274388 ACAATATAATAAAAA TGCAGTTATT GCA AATAACAACA TCCATGACCAATACA TERM 194 275880 - 275866 - g 70 -7.2 -3.66844 | TTCATACTGGAACAA TTTCCA AAC TGGAAA CACAATAAAAATAGC Msm_0282 272750 - 275899 + | adhesin-like protein TERM 195 275900 - 275920 + T 75 -2.5 -6.04324 | opp_overlap 275903, overlap 275901 275903 ATAAAAATAGCATAA AAAGAGGTT AAA AACCTCTAA TTTTTTCTTTTTTAA TERM 196 275901 - 275919 + T 71 -6 -4.18934 | opp_overlap 275903, overlap 275900 275903 TAAAAATAGCATAAA AAGAGGTT AAA AACCTCTA ATTTTTTCTTTTTTA TERM 197 275903 - 275917 + T 77 -8.6 -3.6144 | opp_overlap 275903, overlap 275901 275900 AAAATAGCATAAAAA GAGGTT AAA AACCTC TAATTTTTTCTTTTT TERM 198 275917 - 275903 - T 93 -8.6 -5.02201 | opp_overlap 275903 275901 275900 AAAATAGCATAAAAA GAGGTT AAA AACCTC TAATTTTTTCTTTTT Msm_0283 276170 - 275952 - | hypothetical protein Msm_0284 276846 - 276181 - | ribose 5-phosphate isomerase, RpiA TERM 199 276567 - 276583 + g 78 -5.9 -4.87786 | GAGCTGCTCCTCCAC CTTTAAC AAG GTTAAGG TTTTTATCCACTTCG Msm_0285 277304 - 276867 - | hypothetical protein Msm_0286 278347 - 277301 - | glycerol 1-phosphate dehydrogenase TERM 200 277455 - 277474 + g 70 -6.4 -4.18802 | opp_overlap 277457 CCCAATTCCTTAGCA GATGTTGG AGCT CCAACAGC TTTTAAACTATCTCT Msm_0287 278499 - 279908 + | prolyl-tRNA synthetase TERM 201 280273 - 280289 + G 71 -6.6 -4.14945 | opp_overlap 280272 AAAATGGTAATTGAT TCAAGC AAACA GCTTGA TTTCATTATTATTCC Msm_0288 279919 - 280593 + | hypothetical protein Msm_0289 280594 - 281334 + | phosphomethylpyrimidine kinase (HMPP-kinase), ThiD Msm_0290 282096 - 281338 - | nitrate/sulfonate/bicarbonate ABC transporter, ATPase component, TauB Msm_0291 282847 - 282107 - | nitrate/sulfonate/bicarbonate ABC transporter, permease component, TauC Msm_0292 283017 - 283952 + | metal-dependent membrane protease TERM 202 283998 - 283962 - T 84 -5.4 -5.42198 | gap 1, opp_overlap 283963 283965 283968, overlap 283965 GCTTAAAAAATAAAA TAAGAAGTTTATGCAGT TTCT ACTACATTAACTTC-TA TTTCCCTTGGTTCTT TERM 203 283965 - 283996 + T 70 -7.4 -3.48598 | opp_overlap 283962 283965, overlap 283963 283968 TAAAAAATAAAATAA GAAGTTTATGCAGT TTCT ACTACATTAACTTC TATTTCCCTTGGTTC TERM 204 283996 - 283965 - T 93 -9.6 -4.75934 | opp_overlap 283965 283963 283968, overlap 283962 TAAAAAATAAAATAA GAAGTTTATGCAGT TTCT ACTACATTAACTTC TATTTCCCTTGGTTC Msm_0293 286093 - 283970 - | cation transporter HAD ATPase Msm_0294 286364 - 286104 - | hypothetical protein TERM 205 286415 - 286401 - H 79 -7.2 -4.46615 | opp_overlap 286409, overlap 286410 TATTATTAATTAAAA CCTAAA TTA TTTAGG TCTACCTAAAACTTA TERM 206 286467 - 286410 - H 70 -8.2 -3.02204 | opp_overlap 286409, overlap 286401 286451 TTAAAACCTAAATTA TTTAGGTCTACCTAAAACTTATAT TGGTTATATT ATATAAATGTTAGGTATACCTAAA AAAAACAATTATGAA TERM 207 287029 - 287015 - g 84 -6.4 -5.13343 | TAATTTAAAAGAAAA TGCCAA AAT CTGGCA GGATACAGGAAGTGT TERM 208 287360 - 287321 - g 79 -8 -4.06687 | opp_overlap 287307 287302 287325, overlap 287323 ATTTGTTAGAAATAA CAGATTTAATCTCTACAG CGCA CCGCAGAGAATAAATCTT GAAAAATAAAATTAT TERM 209 287358 - 287323 - g 87 -10.6 -3.62695 | opp_overlap 287307 287302 287325, overlap 287321 TTGTTAGAAATAACA GATTTAATCTCTACAG CGCA CCGCAGAGAATAAATC TTGAAAAATAAAATT Msm_0295 286539 - 287369 + | formate dehydrogenase accessory protein, FdhD Msm_0296 287698 - 287372 - | putative carboxymuconolactone decarboxylase Msm_0297 288183 - 287758 - | exosome subunit Msm_0298 288768 - 288214 - | 50S ribosomal protein L15e Msm_0299 288981 - 289379 + | hypothetical protein TERM 210 289515 - 289529 + F 71 -2.9 -5.52384 | opp_overlap 289515 TTTAGGCAAAATAAA GTATT TTAGT AATAC TTTTTTTAGTAAACC TERM 211 289787 - 289817 + G 74 -9 -3.16068 | opp_overlap 289797, overlap 289797 TGCAGCTTACAGTCA CGGAGGAGAACCAG AAT CTGGTTTTGATCCG ATTTTAGGTTGGAAC TERM 212 289797 - 289807 + G 74 -6.8 -4.30034 | opp_overlap 289797, overlap 289787 AGTCACGGAGGAGAA CCAG AAT CTGG TTTTGATCCGATTTT Msm_0300 289659 - 291278 + | peptide/nickel ABC transporter, solute-binding component TERM 213 291267 - 291315 + F 71 -3.6 -5.40072 | gap 1, opp_overlap 291276 291279, overlap 291268 291271 291276 291279 AAACGTGTTTCATCA ATAGAAAAATGA-TTTAAATGAT TCAA ATCATTTAAAATCATTTTATTAC TTTTTTTGGACAACG TERM 214 291268 - 291314 + F 71 -7.1 -3.83561 | gap 1, opp_overlap 291276 291279, overlap 291267 291271 291276 291279 AACGTGTTTCATCAA TAGAAAAATGA-TTTAAATGAT TCAA ATCATTTAAAATCATTTTATTA CTTTTTTTGGACAAC TERM 215 291271 - 291311 + F 71 -6.6 -4.03885 | gap 1, opp_overlap 291276 291279, overlap 291268 291267 291276 291279 GTGTTTCATCAATAG AAAAATGA-TTTAAATGAT TCAA ATCATTTAAAATCATTTTA TTACTTTTTTTGGAC TERM 216 291276 - 291306 + F 83 -6.5 -4.95211 | gap 1, opp_overlap 291276 291279, overlap 291271 291268 291267 291279 TCATCAATAGAAAAA TGA-TTTAAATGAT TCAA ATCATTTAAAATCA TTTTATTACTTTTTT TERM 217 291306 - 291276 - f 83 -6.5 -5.1244 | gap 1, opp_overlap 291271 291268 291267 291276 291279, overlap 291279 TCATCAATAGAAAAA TGA-TTTAAATGAT TCAA ATCATTTAAAATCA TTTTATTACTTTTTT TERM 218 291302 - 291279 - f 75 -8.4 -3.39242 | opp_overlap 291276 291271 291268 291267 291279, overlap 291276 TCAATAGAAAAATGA TTTAAATGAT TCAA ATCATTTAAA ATCATTTTATTACTT TERM 219 291279 - 291302 + F 71 -8.4 -2.56514 | opp_overlap 291279 291276, overlap 291276 291271 291268 291267 TCAATAGAAAAATGA TTTAAATGAT TCAA ATCATTTAAA ATCATTTTATTACTT Msm_0301 291336 - 292331 + | peptide/nickel ABC transporter, permease component, DppB Msm_0302 292321 - 293169 + | peptide/nickel ABC transporter, permease component, DppC TERM 220 293590 - 293578 - g 79 -3.5 -5.59962 | TAAAACAAAGAAAAA TATTT GAA AAATA CGGATTAAGTGAAGA Msm_0303 293181 - 294113 + | peptide/nickel ABC transporter, ATP-binding component, DppD TERM 221 294369 - 294350 - g 71 -8 -3.33696 | GCCCTGTTCAATTAA TTTTTCAG CACC CTGAAAAA GTAATGAATCCAAAA Msm_0304 294115 - 294729 + | peptide/nickel ABC transporter, ATP-binding component, DppF TERM 222 294741 - 294712 - T 71 -6 -4.22948 | opp_overlap 294712 294709 AAAATTTATTTAAAA GATATTAATAAT ATTTAA ACTATTAATATC TTATTTTCTAGCTTT Msm_0305 295377 - 294742 - | hypothetical protein Msm_0306 296214 - 295390 - | polyferredoxin, iron-sulfur binding TERM 223 296089 - 296106 + g 72 -5.7 -4.46112 | opp_overlap 296088 TGCTATAGCAATGAT TTCTTTT TGAG AAAAGAA TTTATTTAACTCAAA Msm_0307 297241 - 296282 - | ribokinase family sugar kinase Msm_0308 298144 - 297251 - | tetrahydromethanopterin formyltransferase Msm_0309 299210 - 298164 - | hypothetical protein Msm_0310 300576 - 299215 - | polyferredoxin, iron-sulfur binding Msm_0311 301625 - 300582 - | polyferredoxin, iron-sulfur binding TERM 224 301043 - 301055 + g 87 -7.7 -4.88228 | opp_overlap 301041, overlap 301041 GAAAAGTTACAACCT GAGCT ATC AGCTC TTTTTGATCTTGGAT Msm_0312 302751 - 301627 - | [NiFe]-hydrogenase-3-type complex, large subunit/NADH:quinone oxidoreductase (complex I), subunit 49K/NdhH/NuoD Msm_0313 303197 - 302748 - | [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase (complex I), subunit PSST/NdhK/NuoB Msm_0314 303628 - 303236 - | hypothetical protein Msm_0315 303938 - 303639 - | [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaL Msm_0316 304206 - 303949 - | hypothetical protein Msm_0317 305074 - 304214 - | NADH dehydrogenase (ubiquinone), subunit 1 Msm_0318 305297 - 305082 - | hypothetical protein Msm_0319 305976 - 305305 - | NADH dehydrogenase I, subunit N related TERM 225 305440 - 305428 - G 74 -7.7 -3.92542 | CTTACTTGCAAAGAA TGGTG CAA CACCA CACTCTCCCAAAATT Msm_0320 306678 - 305983 - | [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaG Msm_0321 307271 - 306678 - | hypothetical protein Msm_0322 307528 - 307268 - | [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaE Msm_0323 307790 - 307521 - | hypothetical protein Msm_0324 308051 - 307800 - | hypothetical protein Msm_0325 308553 - 308056 - | hypothetical protein Msm_0326 308930 - 308553 - | hypothetical protein TERM 226 309923 - 309895 - g 71 -7.6 -3.55524 | overlap 309886 AATGAGTGAAATTAA TTTCAAAGCTGA TTCAT CCAACTTTGAAA AACAGATTAATGAAA Msm_0327 309035 - 309964 + | UDP-glucose 4-epimerase (NAD dependent) Msm_0328 310350 - 309976 - | hypothetical protein TERM 227 311124 - 311111 - g 74 -5.3 -4.81083 | opp_overlap 311111 CTTAACGATGAAAAA GCTAA ATTT TTAGC TATAATAATGTAAAA Msm_0329 310577 - 311137 + | xenobiotic response element family DNA binding protein TERM 228 311950 - 311964 + G 74 -6.4 -4.4084 | opp_overlap 311950, overlap 311951 TCTACGGACAATGGA TTGCAG GAT CTGCAG TTTTCATATATGATT TERM 229 312212 - 312198 - g 71 -8.6 -2.87756 | opp_overlap 312202, overlap 312195 AGAATTAAGGAAGGA TTCGGT CAA ACCGAA ACAGTATTGACTATT Msm_0330 311157 - 312827 + | acetyl-CoA synthetase, AMP-forming-related, Acs Msm_0331 312836 - 313075 + | 2-oxoisovalerate ferredoxin oxidoreductase, delta subunit Msm_0332 313080 - 314180 + | 2-ketoisovalerate ferredoxin reductase TERM 230 314712 - 314689 - g 71 -3.2 -5.252 | gap 1, opp_overlap 314703 314704, overlap 314704 314710 TAGTTGGAGAAAAAA CTGTTACCTGT CAA ACAGG-AAGAG ATCCTGATTATGCAG TERM 231 315079 - 315091 + G 77 -9.1 -3.26471 | opp_overlap 315079 TCAATGTAGACAGAA GCGGA GAC TCCGC TTACTGTGAAAGTAC TERM 232 315091 - 315079 - g 80 -9.1 -3.61983 | opp_overlap 315079 TCAATGTAGACAGAA GCGGA GAC TCCGC TTACTGTGAAAGTAC Msm_0333 314193 - 315653 + | 2-oxoisovalerate ferredoxin oxidoreductase, beta subunit TERM 233 316008 - 315994 - g 71 -8.6 -2.8194 | CAATTATTGATTATA GAACTG GAG CAGTTC ACCCTAAATTTACAG TERM 234 316850 - 316814 - g 86 -9.6 -4.07089 | AAGAGAAATATTAAA TGCAGGAGTTATATCT GGAAG AGATATGACTCCTGAA ACCGCTTATGTTAAA Msm_0334 315669 - 316979 + | glutamyl-tRNA(Gln) amidotransferase subunit D TERM 235 318462 - 318436 - g 73 -8.1 -3.37895 | opp_overlap 318436 TTGAAGAGATATTAA CTGATGTTGAA GTAGA TCCAACACCAG TAGCTTCCCTTCTTG Msm_0335 316992 - 318857 + | glutamyl-tRNA(Gln) amidotransferase subunit E TERM 236 318854 - 318878 + T 79 -7.3 -4.72696 | opp_overlap 318851 318860, overlap 318851 318852 318855 CATTCAGAAAATGTT ATAAAAGAGTT AAT AACTCTTTTAC TTATTTTTATTTAAA TERM 237 318855 - 318877 + T 86 -10.8 -3.41991 | opp_overlap 318851 318860, overlap 318851 318854 318852 ATTCAGAAAATGTTA TAAAAGAGTT AAT AACTCTTTTA CTTATTTTTATTTAA TERM 238 318872 - 318860 - T 74 -6.3 -4.46581 | opp_overlap 318851 318855 318854 318852, overlap 318851 GAAAATGTTATAAAA GAGTT AAT AACTC TTTTACTTATTTTTA Msm_0336 319225 - 319022 - | hypothetical protein Msm_0337 319368 - 319583 + | putative adhesin-like protein Msm_0338 319693 - 319947 + | hypothetical protein Msm_0339 320063 - 320248 + | hypothetical protein TERM 239 320509 - 320531 + G 74 -7 -4.32201 | opp_overlap 320526, overlap 320526 CTAATGGAAAATTAT CCTGGATTTG ACA CAATTTCAGG TTTTGAATTAGTTGA Msm_0340 320359 - 321273 + | thioredoxin reductase (NADPH), TrxB Msm_0341 321472 - 321960 + | hypothetical protein TERM 240 321978 - 321961 - T 71 -5.5 -4.61916 | opp_overlap 321961 321963, overlap 321963 ATAAAAAACAAATAA TAGGGCA AAAA TGCCCTT ATCTTTTTTTACATT TERM 241 321976 - 321963 - T 76 -8.1 -3.8648 | opp_overlap 321961 321963, overlap 321961 AAAAAACAAATAATA GGGCA AAAA TGCCC TTATCTTTTTTTACA TERM 242 321963 - 321976 + T 79 -8.1 -4.2757 | opp_overlap 321963 321961, overlap 321961 AAAAAACAAATAATA GGGCA AAAA TGCCC TTATCTTTTTTTACA Msm_0342 323441 - 322236 - | putative transposase Msm_0343 323685 - 324257 + | GMP synthase subunit A Msm_0344 324250 - 324516 + | hypothetical protein Msm_0345 324535 - 325461 + | GMP synthase subunit B Msm_0346 325549 - 326724 + | hypothetical protein TERM 243 326844 - 326827 - g 74 -7.1 -4.07515 | AAATGACAAGAACAA CAGTTTT GAAA AAAACTG CCAAAAAAAAGTAAA Msm_0347 326732 - 327706 + | putative pyridoxal phosphate-dependent enzyme Msm_0348 328034 - 327690 - | hypothetical protein Msm_0349 328179 - 327994 - | hypothetical protein Msm_0350 329661 - 328189 - | (R)-citramalate synthase TERM 244 330393 - 330357 - R 74 -8 -3.63569 | gap 1, overlap 330358 TTAATGGGCGAACAA CCCCACCCTTGG-GTGC TGCT GCACACCCAGGATGGAA AGAACCGACATCGAA TERM 245 330392 - 330358 - R 73 -9.3 -2.7782 | gap 1, overlap 330357 TAATGGGCGAACAAC CCCACCCTTGG-GTGC TGCT GCACACCCAGGATGGA AAGAACCGACATCGA TERM 246 332156 - 332171 + r 73 -9 -2.53715 | overlap 332155 CCCTGCGAACCTCCA TCGCTC GTAA GAGCGA CTTCATCCTGCTCAG TERM 247 333183 - 333168 - R 76 -4.8 -5.41143 | opp_overlap 333168 333166 333172 TATTGTTTAAAAAAA TCTTTT TTCG AAAAGA TCTTTTTTGAAGATT TERM 248 333496 - 333515 + r 73 -9.2 -2.65808 | opp_overlap 333487, overlap 333493 TAAGGAGGTGATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 249 333919 - 333903 - R 71 -7.9 -3.33696 | opp_overlap 333902 333905 TCCGCTGGTAACTAA GAGCGTG GGT CTCGCTC GTTGCCTGACTTAAC TERM 250 334483 - 334510 + r 83 -10.6 -3.03007 | gap 1, opp_overlap 334479, overlap 334500 CTACCACTAGAGCTG CCGGTGTTA-CCG CGG CGGCTGGCACCGG TCTTGCCCAGCTCTT TERM 251 334574 - 334555 - R 76 -6.4 -4.4773 | TTACACTAATGAAAA GCCATCCC GTTA AGAATGGC ACTTGGGATCCCCCC TERM 252 334715 - 334703 - R 72 -7.7 -3.76224 | opp_overlap 334702 CCCGTACCGATCAAA GGCTT GGT AAGCC ATTACCTAACCAACT Msm_0352 336558 - 335521 - | DNA modification methylase TERM 253 336142 - 336159 + g 79 -4.9 -5.2696 | opp_overlap 336138 336142 336143, overlap 336143 TTCATAAGCAATTAA TCTGATT AATG AATCAGG TTTTTTCAGTTTTAC TERM 254 336569 - 336589 + r 76 -4.9 -5.24449 | overlap 336575 TCCATTAACTTCACC TGATTTTTT AAA AAAAAATTA TTTTTTAAATTTGTC Msm_0353 337288 - 336587 - | hypothetical protein Msm_0354 339029 - 337767 - | proteasome-activating nucleotidase Msm_0355 339225 - 339707 + | transcription factor ( MBF1 related) TERM 255 339705 - 339726 + T 83 -6.7 -4.98461 | opp_overlap 339704 339705 339707 AAAATTAAAAAAAGG TAGCTATTT ATTT GAATAGCTA TTTATTTTCTTATTT Msm_0356 340142 - 339708 - | hypothetical protein Msm_0357 341407 - 340184 - | hypothetical protein Msm_0358 341902 - 341462 - | hypothetical protein Msm_0359 343422 - 341986 - | peptide ligase Msm_0360 344535 - 343453 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 256 344049 - 344022 - G 76 -7.2 -4.28977 | opp_overlap 344015 344025 344026 ATAATACACCTAAAA GAATTTGAAAAA CGAT TTTTTCAAGTTC TCCAGGTTCAGTTTT Msm_0361 345708 - 344605 - | carbamoyl-phosphate synthase, large subunit, CarB Msm_0362 346130 - 345705 - | coenzyme F420-reducing hydrogenase (Ni,Fe-hydrogenase maturation protease), delta subunit Msm_0363 346954 - 346187 - | RNA methylase Msm_0364 347428 - 346970 - | nickel responsive regulator Msm_0365 347978 - 347511 - | hypothetical protein Msm_0366 348593 - 348468 - | hypothetical protein Msm_0367 348886 - 349437 + | hypothetical protein Msm_0368 350930 - 349434 - | glutamate synthase (NADPH), subunit 2 Msm_0369 351624 - 350950 - | glutamate synthase, subunit 3 TERM 257 351520 - 351506 - G 72 -7.2 -3.90291 | opp_overlap 351505 ACTCCTGCAACCAAA TAATGC ATT GCATTA GGATTTTTAATAAGT Msm_0370 352554 - 351637 - | glutamate synthase, subunit 1 Msm_0371 353129 - 352542 - | glutamine amidotransferase subunit PdxT TERM 258 352842 - 352855 + g 84 -5.3 -5.40072 | AATTCCCAATAAAGG CTGAT CAAA ATCAG TTTTTTTACCAAGCA Msm_0372 353847 - 353383 - | HEAT repeat-containing PBS lyase Msm_0373 353953 - 354954 + | isocitrate/isopropylmalate dehydrogenase, LeuB Msm_0374 354955 - 356433 + | long-chain fatty-acid-CoA ligase (AMP-forming), CaiC Msm_0375 357344 - 356466 - | acetylglutamate kinase TERM 259 356766 - 356778 + g 74 -7.7 -3.85567 | AGCTATTTCACCAGC TGCAG TAT CTGCA TTTAAATTTAAACTT Msm_0376 358634 - 357606 - | alcohol dehydrogenase (zinc-binding), GroES-like protein TERM 260 357803 - 357815 + g 80 -6.3 -4.87786 | TTCTACTTATTCCCT GGATT GTT AATCC TTTTTCTAAAATTAA ispD 359328 - 358618 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Msm_0378 359952 - 359335 - | SAM-dependent methyltransferase argJ 361541 - 360321 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein Msm_0380 361798 - 361565 - | hypothetical protein Msm_0381 363088 - 361886 - | hypothetical protein Msm_0382 364106 - 363081 - | hypothetical protein Msm_0383 364924 - 364181 - | phosphohydrolase calcineurin-like superfamily TERM 261 364268 - 364286 + g 89 -7.6 -4.95758 | opp_overlap 364267 TGTATCTTCAGTAAT TTCATATA CAT TATATGAA TTTTTATCATCTCCT nac 365284 - 364934 - | nascent polypeptide-associated complex protein Msm_0385 365442 - 366866 + | anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase elongator protein Msm_0386 369118 - 367505 - | sodium/proline symporter (proline permease), PutP TERM 262 367661 - 367647 - G 86 -10 -3.74383 | ATTACATCAATATAA GGCCAT GGC ATGGCC GGCAATAAAGTTGCA Msm_0387 369236 - 370537 + | coenzyme F390 synthetase, PaaK Msm_0388 370548 - 370979 + | amino acid regulator Msm_0389 371321 - 370998 - | hypothetical protein Msm_0390 371626 - 371348 - | hypothetical protein Msm_0391 372268 - 371684 - | indolepyruvate oxidoreductase subunit B Msm_0392 374169 - 372271 - | indolepyruvate ferredoxin oxidoreductase, alpha subunit TERM 263 373544 - 373563 + g 80 -5.8 -5.05782 | overlap 373527 GGAACAAACTGTGCA GGGTTTTT CTTG AAAAATCC TTTTTTCCAATGGCT Msm_0393 374285 - 375766 + | succinate dehydrogenase/fumarate reductase iron-sulfur subunit Msm_0394 375778 - 376683 + | rRNA methylase Msm_0395 376680 - 377501 + | ferredoxin, iron-sulfur binding TERM 264 377743 - 377722 - g 71 -3 -5.14626 | overlap 377683 377723 AGTATCAAAATAAAA GCTCCATA TGAATT TATGGAGT CAAAACAATTTAAAC TERM 265 378129 - 378107 - g 100 -13.6 -3.86684 | opp_overlap 378102 AGAATTTATATCAAA TTTATGGAGC AGG GCTCCATAAA ATACGATTTGATTTA TERM 266 378448 - 378436 - g 80 -7.7 -4.26188 | overlap 378442 GGCACAGACTTAAAA CACGA ATA TCGTG AAGCCATCGATAAAT Msm_0396 377701 - 378918 + | putative transposase TERM 267 380274 - 380306 + G 79 -7.1 -4.35524 | opp_overlap 380281, overlap 380281 TTGATTTTACAGACA CTAAAAATGTAGTTG TTG CAGCTACAATGTTAG TTTTAGGTTTAGGAG TERM 268 380299 - 380281 - g 78 -6 -4.86133 | opp_overlap 380274 380281 TACAGACACTAAAAA TGTAGTTG TTG CAGCTACA ATGTTAGTTTTAGGT Msm_0397 379091 - 380437 + | xanthine/uracil permease, UraA Msm_0398 380430 - 381056 + | uracil phosphoribosyltransferase, Upp TERM 269 381053 - 381081 + T 76 -4.7 -5.42198 | opp_overlap 381054 381057, overlap 381057 AGTATACGGTACAAA ATAATACTATGAA TTA TTCATAGTATTCC TTTTCTTTTTTAAAA TERM 270 381080 - 381054 - T 81 -8.2 -4.41548 | opp_overlap 381053 381057, overlap 381057 GTATACGGTACAAAA TAATACTATGAA TTA TTCATAGTATTC CTTTTCTTTTTTAAA TERM 271 381077 - 381057 - T 89 -9.9 -4.32067 | opp_overlap 381057 381053, overlap 381054 TACGGTACAAAATAA TACTATGAA TTA TTCATAGTA TTCCTTTTCTTTTTT TERM 272 381057 - 381077 + T 88 -9.9 -3.989 | opp_overlap 381054 381057, overlap 381053 TACGGTACAAAATAA TACTATGAA TTA TTCATAGTA TTCCTTTTCTTTTTT Msm_0399 381788 - 381123 - | hypothetical protein TERM 273 381580 - 381608 + g 83 -9.7 -3.87869 | opp_overlap 381580 381576 ATAGAAAATAATGGA GCAGCTGTTGT AATTAAA ACAATAGCTGC TTTATAAGACATTCC Msm_0400 382558 - 381932 - | hypothetical protein TERM 274 382246 - 382227 - G 79 -2.8 -5.88197 | overlap 382237 382239 TCAAATACAAAAAAA GCATAATC AACA GATGACGC ATCATCATCAAACAA Msm_0401 383304 - 382561 - | surface protease dcd 383470 - 384054 + | deoxycytidine triphosphate deaminase TERM 275 384153 - 384139 - g 77 -10 -2.54325 | opp_overlap 384139, overlap 384138 384136 384134 TCCTTTGAAATATAT TCCGGA GTT TCCGGA TTTACAGATTATGGA TERM 276 384139 - 384153 + G 86 -10 -3.62591 | opp_overlap 384139 384138 384136 384134 TCCTTTGAAATATAT TCCGGA GTT TCCGGA TTTACAGATTATGGA Msm_0403 384070 - 385764 + | glycyl-tRNA synthetase TERM 277 385758 - 385782 + T 75 -8.8 -3.56246 | opp_overlap 385755 385758 385762, overlap 385755 385753 385762 TTTGGAAGAATATTA TAAATGAGTA AAAAA TACTCATTTA TTAATCTTATTTTTA TERM 278 385782 - 385758 - T 72 -8.8 -2.85545 | opp_overlap 385758 385755 385753 385762, overlap 385755 385762 TTTGGAAGAATATTA TAAATGAGTA AAAAA TACTCATTTA TTAATCTTATTTTTA Msm_0404 386567 - 385776 - | transcriptional regulator Msm_0405 386763 - 387518 + | metal-dependent DNase Msm_0406 387976 - 387527 - | hypothetical protein TERM 279 387612 - 387601 - G 74 -5.8 -4.55128 | AGCGGGAAAGTAAAA GTGC TTCT GCAC CATAATTACTTCTCA Msm_0407 389031 - 387982 - | P-loop containing nucleoside triphosphate hydrolase (NAD(P)-binding) TERM 280 389219 - 389193 - H 70 -4.6 -4.99043 | overlap 389195 TTTTTATAAATAAAA TATGATAATTAT TAT ATAACTATCAAA AAAGATTAGGAGACT TERM 281 389217 - 389195 - H 74 -7.2 -4.11748 | overlap 389193 TTTATAAATAAAATA TGATAATTAT TAT ATAACTATCA AAAAAGATTAGGAGA Msm_0408 389241 - 390185 + | hypothetical protein TERM 282 390401 - 390391 - g 70 -4 -4.94811 | TTAAAAATAAATAAA GATA ATT TATC CACCAGAATTGTCAG Msm_0409 390202 - 390759 + | C4-type Zinc-finger protein TERM 283 390783 - 390763 - T 77 -5.5 -4.99056 | opp_overlap 390761 390764, overlap 390764 GAAGATAATTAAAAA GGAAGAA TTTATTC TTCTTCC TCTGTTTCTTCATCA Msm_0410 391214 - 390771 - | hypothetical protein TERM 284 391472 - 391453 - R 79 -2.8 -6.12458 | opp_overlap 391455, overlap 391455 TAAAAAAATAAAAAA TAGTAGCC GAAT AGCTACTT TAAATTATCTTTTCT TERM 285 391470 - 391455 - R 71 -5.4 -4.6155 | opp_overlap 391455, overlap 391453 AAAAAATAAAAAATA GTAGCC GAAT AGCTAC TTTAAATTATCTTTT Msm_0411 395721 - 391477 - | adhesin-like protein TERM 286 391820 - 391830 + g 71 -5.4 -4.62471 | opp_overlap 391820 391818 GCAGCAGCATTAATA GTCA GCC TGAC TTTTTCACCATTCAC TERM 287 393942 - 393962 + g 89 -8.5 -4.69053 | TATTTGAAACCTGCC CTTTAAAAT CAG ATTTTAAAG TTTTATTAAATGCTA TERM 288 394579 - 394591 + g 70 -4.1 -5.10461 | TATTGCCCCTCCATT TACTG TTG CGGTA TTTTTATTGAATACG TERM 289 396386 - 396370 - g 84 -10.9 -3.16177 | ATTGTAGACAGCCAA TCTCCAG GAC CTGGAGA AGGAACAAGAGCTAT Msm_0412 396169 - 397299 + | putative adhesin-like protein TERM 290 397300 - 397312 + F 100 -6.3 -6.12458 | opp_overlap 397300 CTATTGCACAGATAA GGTTA AAT TAACC TTTTTTATTTTTTTA Msm_0413 397453 - 397941 + | MarR family transcriptional regulator Msm_0414 397943 - 399319 + | Na+-driven multidrug efflux pump, NorM TERM 291 399294 - 399328 + F 100 -6.7 -5.54403 | opp_overlap 399297, overlap 399297 TCATTAAAAAACTTA AAATTAAATTTGGTC ATGCC GACTAAATTTAATTC TTTTTCTTATTTTTT TERM 292 399325 - 399297 - f 79 -6.9 -4.5366 | opp_overlap 399297 399294 TTAAAAAACTTAAAA TTAAATTTGGTCA TGC CGACTAAATTTAA TTCTTTTTCTTATTT TERM 293 399297 - 399325 + F 90 -8.4 -4.74161 | opp_overlap 399297, overlap 399294 TTAAAAAACTTAAAA TTAAATTTGGTC ATGCC GACTAAATTTAA TTCTTTTTCTTATTT Msm_0415 399491 - 400168 + | uridylate kinase, PyrH Msm_0416 400181 - 400972 + | Mg-dependent DNase, TatD-related Msm_0417 400988 - 401179 + | transmembrane protein with a zinc ribbon Msm_0418 401189 - 401512 + | hypothetical protein Msm_0419 401514 - 402368 + | hypothetical protein Msm_0420 402865 - 402365 - | permease Msm_0421 402837 - 403196 + | hypothetical protein Msm_0422 403232 - 404314 + | hypothetical protein TERM 294 405739 - 405729 - g 72 -2.4 -5.47399 | opp_overlap 405729 TCAAGCCTAAAAAAA GGGC GGT GCTC TATCCTCCAGTGATT Msm_0423 404351 - 406255 + | glycosyltransferase tfb 407199 - 406267 - | transcription initiation factor IIB Msm_0425 407534 - 407247 - | H/ACA RNA-protein complex component Gar1 Msm_0426 408401 - 407664 - | demethylmenaquinone methyltransferase Msm_0427 408850 - 410109 + | DNA primase Msm_0428 410122 - 411030 + | phage integrase family integrase/recombinase TERM 295 411175 - 411158 - g 79 -4.9 -5.252 | TACTGCTAGAAAAAA CATATTC CAAG GAATACG CGAATCTAGCACTGT Msm_0429 411123 - 411728 + | biotin biosynthesis protein, BioY TERM 296 411733 - 411744 + F 79 -4.4 -5.64328 | opp_overlap 411733 411730 CAAAAGAATAAATAA GGTT TTTT AACC TTTTCTTTTTTTATT Msm_0430 411770 - 412159 + | hypothetical protein Msm_0431 412333 - 413505 + | ATP-dependent carboligase, biotin carboxylase-related Msm_0432 413640 - 413488 - | hypothetical protein Msm_0433 414486 - 413791 - | V-type ATP synthase subunit D Msm_0434 415900 - 414512 - | V-type ATP synthase subunit B Msm_0435 417657 - 415903 - | V-type ATP synthase subunit A Msm_0436 417971 - 417654 - | V-type ATP synthase subunit F TERM 297 417875 - 417865 - G 74 -6.8 -4.30034 | opp_overlap 417865 AAAATTTTATCAAAA GCTG CGA CAGC TTCTTCAGCAGAATT Msm_0437 419122 - 417968 - | V-type ATP synthase subunit C TERM 298 418341 - 418351 + g 84 -5.4 -5.48303 | opp_overlap 418341 GCAATATCATCATAA GACA AAT TGTC TTTTTTTGCCCTTAT Msm_0438 419760 - 419134 - | vacuolar-type H+-transporting ATP synthase, subunit E TERM 299 419536 - 419548 + g 71 -7.7 -3.39529 | TTTAGCTCCTAATTC TGCTC TAC GAGCA TTCATCTTAGCTTCG TERM 300 419575 - 419591 + g 71 -8.1 -3.36769 | overlap 419574 TTCGGAAATAATTTG CTGATAT TTC ATATCAG ATTGTTTTTTACCAT TERM 301 419628 - 419639 + g 80 -5.8 -5.03314 | AAATTTTATTCTTTT CTGC TTCA GCAG TTTTTTCAGCATCAC Msm_0439 420259 - 419774 - | vacuolar-type H+-transporting ATP synthase, subunit K Msm_0440 422316 - 420313 - | V-type ATP synthase subunit I TERM 302 420787 - 420775 - G 71 -5.5 -4.64861 | overlap 420758 420756 420776 GGCTTCTAAAACAAA CCAGC AAA GCTGA GATCCAATAGCTTCT TERM 303 420874 - 420852 - G 72 -7.2 -3.87952 | opp_overlap 420870 420873, overlap 420873 CAATAACAAAACCAA TATTAGTATA AAT TATACCAATA GCTATTGCTATTATT Msm_0441 422641 - 422327 - | vacuolar-type H+-transporting ATP synthase, subunit H Msm_0442 423264 - 422917 - | hypothetical protein Msm_0443 423334 - 423669 + | hypothetical protein Msm_0444 424010 - 423672 - | hypothetical protein Msm_0445 424523 - 424017 - | NADH dehydrogenase/NAD(P)H nitroreductase Msm_0446 425335 - 424529 - | citrate synthase Msm_0447 426254 - 425382 - | fumarate hydratase, alpha subunit Msm_0448 427161 - 426259 - | hypothetical protein Msm_0449 428564 - 427167 - | 2-methylcitrate dehydratase TERM 304 428201 - 428185 - G 76 -5.2 -5.00884 | ACCGCTTCTAAAAAA GATTTG CCGTC CAAATC ATAAGCTTCACTAAT TERM 305 428637 - 428617 - R 93 -11.3 -3.78067 | AATAGTTAACTTAAA TGGTGTTAA AAA TTAACACCA AGGTGTACCGCTTAG Msm_0450 429120 - 428629 - | hypothetical protein TERM 306 429157 - 429140 - R 71 -8.5 -2.71712 | opp_overlap 429142, overlap 429139 429142 429148 TTTCCTCCTCTAAAT GAGAAAC AGAA GTTTCTC TTCCAATTTTAGGTT Msm_0451 430031 - 429120 - | hypothetical protein Msm_0452 431505 - 430240 - | DNA-binding protein (regulator) TERM 307 430643 - 430659 + g 75 -5.1 -5.05153 | AAAAACATATGGCCA CCATCAA TAA TTGTTGG TTTGTTTTTTACAGT Msm_0453 431567 - 432508 + | hypothetical protein Msm_0454 432513 - 432911 + | hypothetical protein Msm_0455 433657 - 432908 - | hypothetical protein Msm_0456 434059 - 433718 - | hypothetical protein Msm_0457 434202 - 435776 + | D-3-phosphoglycerate dehydrogenase TERM 308 435777 - 435809 + F 77 -3.1 -6.01369 | gap 1, opp_overlap 435777 GGATTAGAATTATAA TAAAAAACAATTAT TTCACC ATA-TTGTTTTTTA TTTTTTTATTCTTTA Msm_0458 436252 - 436734 + | transposase homeodomain-like superfamily protein Msm_0459 437078 - 436860 - | hypothetical protein Msm_0460 437078 - 437632 + | transposase TERM 309 437913 - 437923 + G 70 -4 -4.98436 | opp_overlap 437913, overlap 437907 AAAGATGTTTAAAGA TAAG TTT CTTA TTTTTATAATATTAA TERM 310 438025 - 438011 - g 79 -7.2 -4.42974 | CTGACACACAAGAAA GTGTTA TAT TAACAC ATGATGATTTAAGTA TERM 311 438394 - 438360 - g 86 -7.4 -4.84642 | opp_overlap 438360 438362 438370 438372, overlap 438362 438363 TGCAAATGAAGAAAA TAGTTTTAAAAATGGA ATT TCCATCTTTAAAAACA TTAATATTGATGGAA TERM 312 438392 - 438362 - g 77 -7.8 -4.03104 | opp_overlap 438362 438360 438370 438372, overlap 438360 438363 CAAATGAAGAAAATA GTTTTAAAAATGGA ATT TCCATCTTTAAAAA CATTAATATTGATGG TERM 313 438391 - 438363 - g 87 -11.3 -3.00235 | opp_overlap 438362 438360 438370 438372, overlap 438362 438360 AAATGAAGAAAATAG TTTTAAAAATGGA ATT TCCATCTTTAAAA ACATTAATATTGATG Msm_0461 437902 - 440982 + | adhesin-like protein TERM 314 440979 - 441005 + T 74 -3.8 -5.52384 | opp_overlap 440976 440984, overlap 440980 440984 AATAAAAATCAACCC TTAAAGAGAATT CCT AATTCTCTTAAC TTTTTTTAATAGAAA TERM 315 440980 - 441004 + T 71 -7.3 -3.90707 | opp_overlap 440976 440984, overlap 440979 440984 ATAAAAATCAACCCT TAAAGAGAATT CCT AATTCTCTTAA CTTTTTTTAATAGAA TERM 316 440984 - 441000 + T 74 -8.1 -3.5915 | opp_overlap 440976 440984, overlap 440980 440979 AAATCAACCCTTAAA GAGAATT CCT AATTCTC TTAACTTTTTTTAAT TERM 317 441000 - 440984 - T 74 -8.1 -3.6288 | opp_overlap 440984 440980 440979, overlap 440976 AAATCAACCCTTAAA GAGAATT CCT AATTCTC TTAACTTTTTTTAAT Msm_0462 442016 - 441306 - | metal-dependent protease TERM 318 441692 - 441706 + g 74 -5.8 -4.70659 | opp_overlap 441691 441692 TCATGTGAAATAAAC CATTTT TAG AAAATG TTTTTAAATCTGCAC Msm_0463 442746 - 442027 - | tRNA(His) guanylyltransferase Msm_0464 443514 - 442750 - | L-aspartate dehydrogenase TERM 319 443544 - 443534 - R 79 -2.6 -6.17268 | TCACAACAAAAAAAA TAAT TTA ATTA AAAATACAAGAATAA Msm_0465 444004 - 443597 - | hypothetical protein Msm_0466 444207 - 444929 + | tRNA-binding protein Msm_0467 446343 - 444931 - | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase Msm_0468 446414 - 447016 + | hypothetical protein Msm_0469 446989 - 447552 + | hypothetical protein Msm_0470 447730 - 447545 - | hypothetical protein Msm_0471 448659 - 447739 - | type II secretion system protein F, GspF TERM 320 448358 - 448368 + g 74 -5.4 -4.84529 | opp_overlap 448345 448358, overlap 448350 AGCTGTCTTAAAAAG TCAG GAG CTGA TTTTTCAATTTCTGC Msm_0472 449767 - 448724 - | Xaa-Pro aminopeptidase Msm_0473 450036 - 450788 + | hypothetical protein Msm_0474 451072 - 451200 + | hypothetical protein Msm_0475 451214 - 451933 + | hypothetical protein Msm_0476 451940 - 452176 + | hypothetical protein Msm_0477 452199 - 452957 + | hypothetical protein Msm_0478 452975 - 453202 + | hypothetical protein Msm_0479 453330 - 453893 + | zinc-dependent protease Msm_0480 453900 - 455099 + | YcaO-like protein Msm_0481 455106 - 455759 + | TfuA-like protein Msm_0482 455756 - 456766 + | PP family ATPase Msm_0483 457234 - 456770 - | hypothetical protein Msm_0484 458085 - 457246 - | inosine-5'-monophosphate dehydrogenase related protein Msm_0485 458566 - 458141 - | universal stress protein, UspA Msm_0486 459766 - 458609 - | chlorohydrolase Msm_0487 459974 - 460567 + | hypothetical protein Msm_0488 463746 - 460570 - | carbamoylphosphate synthase, large subunit, CarB TERM 321 462877 - 462889 + g 74 -9.1 -3.06831 | AATTACCTTGTATTC TCCGG TTT CCGGA TTAACTGCAAATTGA TERM 322 463033 - 463045 + g 70 -6.3 -4.28656 | ACCAGTGTGGATTCC CATAG GGT CTATG TTTTCCATGTTACAT Msm_0489 464868 - 463786 - | carbamoyl phosphate synthase small subunit Msm_0490 465604 - 464942 - | SAM-dependent methyltransferase Msm_0491 466438 - 465608 - | nicotinate-nucleotide pyrophosphorylase (carboxylating), NadC TERM 323 467136 - 467106 - g 88 -6.9 -5.28166 | GAAAAGGAATAAAAA TCACATACTCCGG AGATA CCAGACCATGTGA AGAAATGATTGAATT Msm_0492 466505 - 467407 + | ribonuclease Z Msm_0493 467409 - 468152 + | mechanosensitive ion channel protein TERM 324 468222 - 468207 - g 79 -3.3 -5.66989 | GAAAGATGAAAAAAA TGCAA TAATTC TTGCA CATAATTATCAGCCT TERM 325 468480 - 468468 - g 73 -7.7 -3.70437 | opp_overlap 468467 468460, overlap 468466 468460 AGCAAAAGAAGAACA TCCTG ATG CAGGA GTAATTCTTTATGTA Msm_0494 468157 - 469074 + | quinolinate synthetase Msm_0495 469385 - 469107 - | hypothetical protein Msm_0496 470394 - 469390 - | homoserine O-acetyltransferase TERM 326 469661 - 469650 - G 70 -4.4 -4.88228 | overlap 469637 ATTTAACATCAAAAA TGCT GTCA AGCA ATCCTTCATCTCCAA Msm_0497 470434 - 471216 + | hypothetical protein Msm_0498 471692 - 471213 - | hypothetical protein Msm_0499 471790 - 472488 + | hypothetical protein TERM 327 472489 - 472506 + F 100 -7.1 -5.72118 | opp_overlap 472489 GCAGATATTGCATAA GTATGAA TTAT TTCATAC TTTTTTCTATTTTTT TERM 328 472600 - 472590 - g 90 -4 -6.08342 | CAATAAAGAAAAAAA CATT GAA AATG CCACATCTATGATTT Msm_0500 472534 - 473358 + | N-carbamoyl-D-amino acid amidohydrolase Msm_0501 474196 - 473345 - | phycocyanin alpha phycocyanobilin lyase, CpcE TERM 329 475153 - 475123 - g 74 -4.1 -5.13722 | gap 1 TTCAGGAAAATAAAA CCAC-CCTTGTCTT TACA AATACAAGAAGTGG AACTGAACGTTTTGT TERM 330 476571 - 476553 - g 76 -7.4 -4.26622 | overlap 476554 AAAGGAGAGGCAAAA TCTGTTGG TCG CCAACAGG TGAGAGGAAAAATAT TERM 331 476570 - 476554 - g 84 -10.9 -3.14888 | overlap 476553 AAGGAGAGGCAAAAT CTGTTGG TCG CCAACAG GTGAGAGGAAAAATA Msm_0502 474285 - 476885 + | ATP-dependent helicase Msm_0503 476897 - 477364 + | flavodoxin, FldA Msm_0504 477370 - 477738 + | hypothetical protein Msm_0505 477751 - 478158 + | hypothetical protein purP 479252 - 478161 - | 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase Msm_0507 479450 - 479989 + | phosphoesterase, YfcE Msm_0508 479993 - 480625 + | cell division protein J (23S rRNA methylase), FtsJ Msm_0509 481044 - 480622 - | hypothetical protein Msm_0510 481181 - 483181 + | ATPase TERM 332 483161 - 483183 + F 77 -5.7 -5.04908 | gap 1, opp_overlap 483161 483160 TACGAACCAACAAAC GGTTAT-CTC AAAA GAGCATAACC TTCTTTTTTTATTTT Msm_0511 483287 - 483694 + | translation initiation factor IF-2 subunit beta Msm_0512 483715 - 484767 + | NMD3-related protein (nonsense mediated mRNA decay) TERM 333 484805 - 484792 - g 77 -3.9 -5.4833 | GCATTGAAGAAAAAA TTCAA TTAA TTGAA AAAGGAACATTAGAA TERM 334 484863 - 484848 - g 74 -6.2 -4.38092 | GAAGAATTAAAAGAA GTTCTT AAAA AAGAAC AACCTATAGCTTACA Msm_0513 484773 - 485732 + | tyrosyl-tRNA synthetase Msm_0514 485736 - 485945 + | hypothetical protein TERM 335 486658 - 486635 - g 78 -6.8 -4.48333 | AGAGATGAAGCAAAA GGAGAAAATT ATAG AACTTCCTCC CAGTATCAGCAAGTA Msm_0515 486239 - 487624 + | methanol:cobalamin methyltransferase. MtaB Msm_0516 487643 - 488470 + | corrinoid protein (methionine synthase-related), MtaC TERM 336 489485 - 489499 + G 71 -5.6 -4.71186 | overlap 489486 GAAAGTGTATATATG GCCGGA GCT TCCGGA TTTTATGTTGATGCT TERM 337 489486 - 489498 + G 78 -9.1 -3.41627 | overlap 489485 AAAGTGTATATATGG CCGGA GCT TCCGG ATTTTATGTTGATGC Msm_0517 488477 - 490081 + | methyltransferase activation protein, MapA TERM 338 490218 - 490200 - g 78 -8.9 -3.38609 | AATGGAACAGACTAA TGCTTCC TGGCC GGAAGCA CATACAAATCCTGAG Msm_0518 490090 - 491094 + | methylcobalamin:coenzyme M methyltransferase, MtaA Msm_0519 491642 - 491091 - | hypothetical protein Msm_0520 492225 - 491647 - | thymidylate kinase, Tmk TERM 339 492325 - 492293 - H 93 -6.5 -5.50723 | opp_overlap 492301 TCATTAAAACAAAAA GCAAAACAGCTATTT AAT AAATACCTATTTTAC ATATGAATGACCTAT Msm_0521 492404 - 493882 + | hypothetical protein TERM 340 494676 - 494653 - g 78 -9 -3.53224 | TAGTGTCTCCGGAAA CTGTTATATG TCTT CATACAACAG CGGACGCAGCGGAAA Msm_0522 494114 - 496627 + | collagenase, peptidase family U32 Msm_0523 496614 - 498989 + | collagenase, peptidase family U32 Msm_0524 499044 - 500996 + | DNA mismatch repair ATPase, MutS Msm_0525 501035 - 502687 + | protein kinase Msm_0526 504421 - 502949 - | hypothetical protein Msm_0527 505509 - 504496 - | IS element (transposase remnant) Msm_0528 505748 - 505461 - | IS element (transposase remnant) Msm_0529 506711 - 506025 - | hypothetical protein Msm_0530 506886 - 507776 + | O-linked GlcNAc transferase Msm_0531 508564 - 507818 - | adenine/cytosine DNA methyltransferase Msm_0532 508688 - 508987 + | putative IS element (transposase remnant) Msm_0533 509066 - 509494 + | putative IS element (transposase remnant) Msm_0534 509745 - 509903 + | putative IS element (transposase remnant) Msm_0535 510648 - 510121 - | hypothetical protein Msm_0536 511780 - 510707 - | hypothetical protein Msm_0537 512251 - 511889 - | TPR repeat-containing protein TERM 341 512389 - 512354 - H 72 -2.6 -5.77734 | AAAGAAAAAGAAAAA TGCGATTTATTAAATG GACT CAGACAAAAAATCGCA GATGAGAATAATATT Msm_0538 512568 - 512882 + | pyruvate formate-lyase activating enzyme, PflA Msm_0539 512962 - 513861 + | putative DNA-directed DNA polymerase Msm_0540 515544 - 514090 - | transcriptional regulator TERM 342 514391 - 514410 + g 70 -6.5 -4.29106 | opp_overlap 514390 514391 TTTCCTTCACTAAAT TCTGGTT CTTCCA AACCAGA TTTCTTCATCTCACC TERM 343 516925 - 516889 - H 74 -8 -3.63569 | gap 1, overlap 516890 TTAATGGGCGAACAA CCCCACCCTTGG-GTGC TGCT GCACACCCAGGATGGAA AGAACCGACATCGAA TERM 344 516924 - 516890 - H 73 -9.3 -2.7782 | gap 1, overlap 516889 TAATGGGCGAACAAC CCCACCCTTGG-GTGC TGCT GCACACCCAGGATGGA AAGAACCGACATCGA TERM 345 518688 - 518703 + H 73 -9 -2.53715 | overlap 518687 CCCTGCGAACCTCCA TCGCTC GTAA GAGCGA CTTCATCCTGCTCAG TERM 346 520029 - 520048 + H 73 -9.2 -2.65808 | opp_overlap 520020, overlap 520026 TAAGGAGGTGATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 347 520452 - 520436 - H 71 -7.9 -3.33696 | opp_overlap 520435 520438 TCCGCTGGTAACTAA GAGCGTG GGT CTCGCTC GTTGCCTGACTTAAC TERM 348 521016 - 521043 + H 83 -10.6 -3.03007 | gap 1, opp_overlap 521012, overlap 521033 CTACCACTAGAGCTG CCGGTGTTA-CCG CGG CGGCTGGCACCGG TCTTGCCCAGCTCTT TERM 349 521107 - 521088 - H 76 -6.4 -4.4773 | TTACACTAATGAAAA GCCATCCC GTTA AGAATGGC ACTTGGGATCCCCCC TERM 350 521249 - 521237 - H 72 -7.7 -3.76224 | opp_overlap 521236 CCCGTACCGATCAAA GGCTT GGT AAGCC ATTACCTAACCAACT TERM 351 522338 - 522315 - g 72 -6 -4.43877 | opp_overlap 522330, overlap 522321 522330 TAATCGCTAAAGAAA CAGAAACCAT TAAA ATGGGTCCTG GTGTAACCAACCCAT TERM 352 523044 - 523032 - g 73 -7.7 -3.6284 | opp_overlap 523031 AAGGATTAGCTGAAA TGGGT GTA ACCCA ATATGTAGCTGGTTC Msm_0542 522158 - 523123 + | methylenetetrahydromethanopterin reductase Msm_0543 523944 - 523153 - | DNA repair photolyase, SplB TERM 353 524768 - 524751 - g 72 -2.7 -5.32699 | TTAAATAGCAAAAAA GGATATA ATCT TAAATCC AAAGCATACATTTTT Msm_0544 524136 - 525218 + | Fe-S oxidoreductase Msm_0545 526547 - 525255 - | hypothetical protein TERM 354 525699 - 525685 - G 76 -5.6 -5.05301 | AAATAAGTATAAAAA CCAAGC AAA GCTAGG AAAATTACTGAAAAT Msm_0546 526686 - 527168 + | hypothetical protein Msm_0547 527193 - 528473 + | nucleotidyltransferase, cytidyltransferase-related Msm_0548 529197 - 528463 - | 6-phosphogluconate dehydrogenase, beta-hydroxyacid dehydrogenase related, MmsB Msm_0549 529805 - 529194 - | cytochrome C-type biogenesis protein, DsbD TERM 355 529644 - 529624 - G 90 -9.9 -4.08394 | opp_overlap 529623 529624 529626 ATAGCTGCTGTAAAA TATACTGTT GCA AACAGTATA ATTATAAAAATAGCA TERM 356 529624 - 529644 + g 77 -9.9 -2.58544 | opp_overlap 529624, overlap 529623 529626 ATAGCTGCTGTAAAA TATACTGTT GCA AACAGTATA ATTATAAAAATAGCA TERM 357 529689 - 529677 - G 72 -4.9 -4.74598 | opp_overlap 529677 TAAACCTAAAACAAA TGAAA TGA TTTCA GTATTTTTTCTCTTT Msm_0550 530276 - 529815 - | protein disulfide-isomerase, thioredoxin-related TERM 358 530152 - 530162 + g 71 -5.4 -4.59773 | TTGAATTCTGATTCG GAAG CTT CTTC TTTTTCAAAATCACC Msm_0551 531151 - 530285 - | hypothetical protein TERM 359 530388 - 530377 - G 81 -4.4 -5.44638 | ATAATAAAAAGAAAA CTTC CTTA GAAG ACAAATCTATTTCAG Msm_0552 531355 - 531152 - | sulfur transfer protein involved in thiamine biosynthesis Msm_0553 532277 - 531360 - | PP family ATPase Msm_0554 533443 - 532286 - | von Willebrand factor type A domain-containing protein Msm_0555 534314 - 533457 - | MoxR-like ATPase TERM 360 533598 - 533612 + g 74 -4.2 -5.29385 | AACCCAATCTACAGT CCCTCT TAC AGATGG TTTTTTCATTAAATT Msm_0556 535992 - 534388 - | dihydropteroate synthase TERM 361 534509 - 534519 + g 91 -5.4 -5.82036 | GCTGCATGTTCCATT CTTG TTA CAAG TTTTTTATTTATTAT TERM 362 535746 - 535758 + g 75 -4.9 -5.06472 | opp_overlap 535743 AACCTTTAAAAGTAG GAATT CCC AATTC TTTTGTTATTTCTCT TERM 363 536119 - 536167 + H 74 -7.1 -4.03093 | opp_overlap 536117 536119 536127, overlap 536117 536127 536135 TTCACTAAAAAAGGA TTATAAAATCTATAATGATTATC CAT GATAAACTTTATATATTTTGTAA TTTATAATGATTATA Msm_0557 536208 - 536732 + | pyruvate:ferredoxin oxidoreductase, gamma subunit, PorG Msm_0558 536758 - 537000 + | pyruvate:ferredoxin oxidoreductase, delta subunit, PorD Msm_0559 537012 - 538157 + | pyruvate:ferredoxin oxidoreductase, alpha subunit, PorA TERM 364 538289 - 538264 - g 72 -3.3 -5.1861 | gap 1, opp_overlap 538266 538266, overlap 538266 TGCATTAGGAAAAAA TACC-GTAGCTA TTT CAGCTACCGGTT GTCTTGAAGTAATGA TERM 365 538286 - 538266 - g 70 -6.1 -4.22314 | opp_overlap 538266 538266, overlap 538264 CATTAGGAAAAAATA CCGTAGCTA TTT CAGCTACCG GTTGTCTTGAAGTAA Msm_0560 538160 - 539026 + | pyruvate ferredoxin oxidoreductase subunit beta Msm_0561 539040 - 539543 + | formate dehydrogenase, iron-sulfur subunit TERM 366 539596 - 539626 + G 80 -7.7 -4.23244 | opp_overlap 539598, overlap 539592 539598 TGTGTAAGTTGCGGA AATTGTCAGCATC CCAGA GATGCTGATAATC TTTCATTATTTTGTA TERM 367 539598 - 539624 + G 87 -10.3 -3.68647 | opp_overlap 539598, overlap 539596 539592 TGTAAGTTGCGGAAA TTGTCAGCATC CCAGA GATGCTGATAA TCTTTCATTATTTTG TERM 368 539624 - 539598 - g 76 -8.8 -3.55622 | opp_overlap 539598 539596 539592 TGTAAGTTGCGGAAA TTGTCAGCATCC CAG AGATGCTGATAA TCTTTCATTATTTTG Msm_0562 539557 - 539802 + | formate dehydrogenase, iron-sulfur subunit Msm_0563 539895 - 540740 + | fumarate hydratase TERM 369 540750 - 540770 + T 86 -8.5 -4.61648 | opp_overlap 540748 540747 540750 AAATAAAAAATAGGA TTGATTATT TAA AATAATCAA TTTATTGTTCTTCTT TERM 370 540770 - 540750 - T 73 -8.5 -3.16023 | opp_overlap 540750, overlap 540748 540747 AAATAAAAAATAGGA TTGATTATT TAA AATAATCAA TTTATTGTTCTTCTT TERM 371 540795 - 540807 + T 73 -7.7 -3.83791 | CTTCTTTTTTTAATT CCTCA ATA TGAGG TCTTTTATGAGTATT Msm_0564 541464 - 540772 - | phosphate uptake regulator, PhoU Msm_0565 542223 - 541474 - | phosphate ABC transporter, ATPase component, PstB Msm_0566 543075 - 542227 - | phosphate ABC transporter, permease component, PstA Msm_0567 543947 - 543072 - | phosphate ABC transporter, permease component, PstC TERM 372 543599 - 543585 - G 72 -2.8 -5.37593 | overlap 543596 TGTTAAACCAAAAAA TCCGTA AAC TACTGA AGGAATTCCAGATAA TERM 373 543816 - 543805 - G 73 -4.4 -5.00616 | CTTCCTGTTAAAAAA TGGA AAAA TCCA TATGACTGAAATGCA Msm_0568 544772 - 543963 - | phosphate ABC transporter, phosphate-binding component, PstS TERM 374 544223 - 544243 + g 78 -9.1 -3.53091 | CTTGGGAAACTGATT GTTTTACTG CTT CAGTAGAAC TTTGAACAACAGCAT TERM 375 544938 - 544928 - R 82 -2.6 -6.4275 | GAAAAATAAAAAAAA TAAT AAA ATTA TCTGAATGTACGAGG Msm_0569 545817 - 544936 - | phosphate transport system regulator-like protein, PhoU Msm_0570 546626 - 545823 - | hypothetical protein Msm_0571 548226 - 546724 - | hypothetical protein Msm_0572 548736 - 549749 + | H(2)-dependent methylenetetrahydromethanopterin dehydrogenase Msm_0573 549900 - 550898 + | biotin synthase Msm_0574 550908 - 551387 + | hypothetical protein Msm_0575 551392 - 552177 + | hypothetical protein Msm_0576 552178 - 552873 + | NIF3-related protein (NGG1p interacting factor 3) Msm_0577 552922 - 553560 + | ThiF/HesA family dinucleotide-utilizing protein Msm_0578 553553 - 554113 + | hypothetical protein Msm_0579 554531 - 554698 + | polyferredoxin, iron-sulfur binding Msm_0580 554717 - 555505 + | putative adhesin-like protein TERM 376 555811 - 555823 + G 72 -3.4 -5.26918 | TATCACATTAGCTAT TGCA TTTAT TGCA TTTTTTATAGGATCT Msm_0581 555518 - 556804 + | hypothetical protein TERM 377 557522 - 557512 - g 71 -5.4 -4.57474 | TGAAGTTACACAAAA CAGT GCT ACTG AAATTCCATTTAGCG Msm_0582 556841 - 557884 + | peptide methionine sulfoxide reductase, PMSR TERM 378 558094 - 558055 - f 76 -7.5 -4.05045 | opp_overlap 558072, overlap 558046 AAATAACCAATGAAA GTAATACTTTTCTATAA TTTTTT TTAAAAAAAAGTATTAC TCAAATAGGAAAATG TERM 379 558568 - 558581 + G 70 -8.1 -3.09671 | opp_overlap 558568 TTAGCAACTGTAATA GCTGC AGCA GCAGC TGTTGAACTTGCAAT TERM 380 558581 - 558568 - g 70 -8.1 -3.10464 | opp_overlap 558568 TTAGCAACTGTAATA GCTGC AGCA GCAGC TGTTGAACTTGCAAT Msm_0583 558121 - 558759 + | cobalt transport protein CbiM Msm_0584 558760 - 559065 + | cobalt ABC transporter, permease component TERM 381 559047 - 559088 + F 78 -6.2 -4.92783 | opp_overlap 559047, overlap 559058 CGTTATTGGAAAAAT TATAGAAAAAAGAGGTTA AATTTA TAACTTCTTTTTTTCATA TTTTTATACTAGATT TERM 382 559058 - 559077 + F 71 -2.9 -5.69023 | opp_overlap 559047, overlap 559047 AAATTATAGAAAAAA GAGGTTA AATTTA TAACTTC TTTTTTTCATATTTT Msm_0585 559129 - 559959 + | cobalt ABC transporter, permease component, CbiQ Msm_0586 559975 - 560820 + | cobalt ABC transporter, ATPase component, CbiO Msm_0587 561010 - 560810 - | hypothetical protein Msm_0588 561276 - 561046 - | ferrous iron transport protein A, FeoA TERM 383 561322 - 561307 - R 78 -6.2 -4.90455 | opp_overlap 561318 ATATATCTATAAAAA TTTAGG CTTA CCTAAA ATAAAGTTTTTAGTT TERM 384 561426 - 561448 + r 100 -7 -5.93252 | opp_overlap 561426 561425, overlap 561427 ATATAAAAAAATTAT TTGGAAGGAG ATT TTCCTTCCAC TTTTTTATTTTTAGG TERM 385 561427 - 561447 + r 91 -10.5 -4.13511 | opp_overlap 561426 561425, overlap 561426 TATAAAAAAATTATT TGGAAGGAG ATT TTCCTTCCA CTTTTTTATTTTTAG Msm_0589 563524 - 561509 - | ferrous iron transport protein B, FeoB TERM 386 563541 - 563554 + r 73 -3.9 -5.4659 | overlap 563546 AACCATTCTCCTATT TTCTT TAGA AAGAA TTTTTATTTATATTA TERM 387 563608 - 563582 - R 76 -4.7 -5.38326 | gap 1, opp_overlap 563582 563583, overlap 563583 563604 TTAATTAAATAAAAA TTTGAATTTAGG CGTG CCTAAATT-AAA GTTTAAAAATTTATG TERM 388 563800 - 563785 - R 84 -6.2 -5.19261 | overlap 563777 AAAGTGACTAAAAAA TTTAGG TATG CCTAAA AAAATAGAAAGCTTT Msm_0590 564050 - 563898 - | hypothetical protein TERM 389 564121 - 564106 - H 74 -6.2 -4.38927 | TTTTTATATAATAAA TTTAGG CATA CCTAAA AAAATGAAAACATTT TERM 390 564419 - 564402 - H 74 -7.1 -4.03413 | ATTGTTGTATATAAA TTTTAGG TTGA CCTAAAA AAATAAAAACAGTTA Msm_0591 564709 - 564822 + | hypothetical protein TERM 391 564842 - 564820 - f 77 -2.9 -5.93252 | TGCAAAAATAAAAAA TAAACAATT ATAAA AATTATTTA ACCTGTTATAAACCT Msm_0592 565049 - 565765 + | hypothetical protein TERM 392 565782 - 565766 - f 82 -9.5 -3.73359 | opp_overlap 565758 AATAATTTAATATAA TGGGAAT TAC ATTCCCA ACATCTTATTTTTTA TERM 393 565875 - 565896 + F 79 -5.3 -5.42198 | opp_overlap 565877, overlap 565870 565871 AAACTAATTTTTACA TATGTAATG TATA TATTACATA TTTTATTTTTTAAAA Msm_0593 566046 - 566990 + | multidrug ABC transporter, ATPase component, CcmA Msm_0594 567000 - 567722 + | multidrug ABC transporter, permease component TERM 394 567707 - 567728 + F 77 -8.1 -4.14615 | opp_overlap 567707 567724 567726, overlap 567726 CTACTTTACAAAAAA GGATGTTTG CCTA TAAACATCC TTTTGGAGGATTTTT TERM 395 567728 - 567707 - f 90 -7.4 -5.26316 | opp_overlap 567707 567726, overlap 567724 567726 CTACTTTACAAAAAA GGATGTTT GCCTAT AAACATCC TTTTGGAGGATTTTT Msm_0595 567747 - 568469 + | multidrug ABC transporter, permease component TERM 396 568475 - 568454 - T 90 -7.4 -5.26316 | opp_overlap 568454 568453 CTACTTTACAAAAAA GGATGTTT GCCTAT AAACATCC CTTTAAATTTTTGGC TERM 397 568454 - 568475 + T 70 -8.1 -2.9916 | opp_overlap 568454, overlap 568453 CTACTTTACAAAAAA GGATGTTTG CCTA TAAACATCC CTTTAAATTTTTGGC Msm_0596 569395 - 568478 - | type II secretion system protein, GspF Msm_0597 570869 - 569403 - | type II/IV secretion system protein kinase, GspE TERM 398 571021 - 571011 - g 70 -4 -5.00616 | CTCCTGTGGAAAAAA TTGT ATT ACAA CAAAAGAAAATATGG Msm_0598 570982 - 571935 + | SAM-dependent methyltransferase Msm_0599 573185 - 571932 - | hypothetical protein Msm_0600 573776 - 573303 - | MarR family transcriptional regulator TERM 399 573645 - 573632 - G 71 -3.1 -5.31275 | TTTCATTATAAAAAA CATGC ATCA GCATA TAGTACTGATTTTTA TERM 400 573859 - 573884 + H 70 -4.1 -5.14819 | ACAGATTTAATTTTT TGAGTCTGTAA AATT TTATAGGCTTA TTTGTTTTTTAATTT Msm_0601 574013 - 575218 + | putative transposase TERM 401 575336 - 575317 - T 73 -5.1 -4.97312 | opp_overlap 575317 AAAAGTAATTAAAAA GAAGATT TACATT AATCTTC TAGTATCAGTAATTT ef1B 575592 - 575323 - | elongation factor 1-beta TERM 402 575454 - 575436 - G 78 -6.8 -4.38092 | opp_overlap 575453, overlap 575453 CAATAATGAAAATAA GGTTTAAT GCA ACTAAACC AAATGCAATTGGTTC Msm_0603 575778 - 575617 - | Zn-ribbon RNA-binding protein involved in translation Msm_0604 576351 - 575779 - | aspartate/glutamate/uridylate kinase TERM 403 575922 - 575949 + g 72 -2.8 -5.47821 | opp_overlap 575920, overlap 575919 AAGGCAACATTAAGT CTATTGATGTTT CATC AAAAGTCAGTAG TTTTTTTGCATCAAT Msm_0605 576841 - 576503 - | peptidyl-tRNA hydrolase Msm_0606 576967 - 577329 + | hypothetical protein TERM 404 577349 - 577332 - f 81 -8.5 -4.26189 | opp_overlap 577330 577328 577327 577332 TCATAAAGCTTAAAA TGGAAGT TTAA ACTTCCA TGTCTATTTTTTAAA TERM 405 577332 - 577349 + F 75 -8.5 -3.39995 | opp_overlap 577332, overlap 577330 577328 577327 TCATAAAGCTTAAAA TGGAAGT TTAA ACTTCCA TGTCTATTTTTTAAA Msm_0607 577478 - 579256 + | putative ATPase RIL Msm_0608 579630 - 579253 - | putative metal-binding protein Msm_0609 580390 - 579635 - | ferredoxin, iron-sulfur binding Msm_0610 581580 - 580393 - | aspartate aminotransferase radB 582353 - 581649 - | DNA repair and recombination protein RadB Msm_0612 582974 - 582393 - | Sua5/YciO/YrdC/YwlC family translation factor Msm_0613 583034 - 583600 + | phosphatidylglycerophosphate synthase, PgsA Msm_0614 583597 - 583842 + | hypothetical protein Msm_0615 585075 - 583981 - | fructose 1,6-bisphosphatase TERM 406 585252 - 585224 - R 82 -4.7 -5.86609 | opp_overlap 585232, overlap 585226 TTAAAAAAAGAAAAA GATAAGAAGTTAA ATT TTAACTTCTTAAG CTGAAATTGTTATTT TERM 407 585250 - 585226 - R 100 -11.7 -4.51984 | opp_overlap 585232, overlap 585224 AAAAAAAGAAAAAGA TAAGAAGTTAA ATT TTAACTTCTTA AGCTGAAATTGTTAT Msm_0616 596302 - 585248 - | adhesin-like protein TERM 408 595551 - 595535 - G 70 -4.5 -4.90778 | overlap 595537 595549 GTTATCTAAATAAAA CACATTT CTT AAATGTA CCGCAGCACCAGTTA Msm_0617 597727 - 596582 - | thiamine biosynthesis ATP pyrophosphatase, ThiI TERM 409 597652 - 597678 + g 71 -5.3 -4.58685 | gap 1, opp_overlap 597647 TTTTAACCAATTTGC GCTCAAAACGTG CTCT TAC-TTTTGAGC TTTTTAAACCAATTT Msm_0618 598916 - 597729 - | pH regulator (monovalent cation:H+ antiporter) TERM 410 598635 - 598625 - G 71 -3.2 -5.1356 | TTGCAGTAATAAAAA CACC GAC GGTA GATAAAGAGATTCCT TERM 411 599047 - 599025 - R 70 -7.1 -3.58522 | opp_overlap 599015 AGCATTATTGTTAAA GACCCTATT ATCTA AATAAGGTC AATAGCAATATTTAA alaS 601729 - 599036 - | alanyl-tRNA synthetase TERM 412 599126 - 599115 - G 72 -7.2 -3.77831 | TGAGCAAGAGTTAAA CGGC CACC GCCG CCACCACCAAGAACC TERM 413 599441 - 599451 + g 79 -6.8 -4.62872 | opp_overlap 599441 599438 CCATTCAGAAAAGAA CCTG TCA CAGG TTTTTGGAAGTTGAT TERM 414 599451 - 599441 - G 74 -6.8 -4.33182 | opp_overlap 599441, overlap 599438 CCATTCAGAAAAGAA CCTG TCA CAGG TTTTTGGAAGTTGAT TERM 415 601912 - 601896 - R 82 -5.2 -5.70761 | AAAAGAAAAGAAAAA GATAGA AAAAA TCTATC CGAATAAAGCTCCTA rpl12p 602213 - 601908 - | 50S ribosomal protein L12P TERM 416 602030 - 602047 + g 74 -7.7 -3.81428 | overlap 602041 CTGCTGCTGCAGGAG CTGCTGC CATA GCAGTAG TTTCCATTGCTTCAT rplP0 603289 - 602282 - | acidic ribosomal protein P0 TERM 417 603067 - 603077 + g 74 -5.4 -4.74801 | opp_overlap 603067 TATGCTCTGATAAAT CAAC AAT GTTG TTTTTACTAGCATTA rpl1P 603957 - 603289 - | 50S ribosomal protein L1P rpl11p 604596 - 604114 - | 50S ribosomal protein L11P nusG 605066 - 604596 - | transcription antitermination protein NusG secE 605479 - 605300 - | preprotein translocase subunit SecE TERM 418 605373 - 605356 - G 72 -7.1 -3.85878 | opp_overlap 605355 CAACAACACCAATAA TAGCAAT TCCA ATTGCTA CAATTTTTGAAAATT TERM 419 605629 - 605612 - R 81 -4.2 -5.99318 | AAAAAAAAAGAAAAA TGGAAT TAGAAT ATTCCA TCAATGAAATCATCT Msm_0626 606750 - 605617 - | cell division protein FtsZ TERM 420 606323 - 606339 + g 72 -8.7 -3.13403 | opp_overlap 606321, overlap 606321 AATTTAGCAATGATT GGTGCTG AAC CAGTACC TGTTCCTCCACCAAG TERM 421 606481 - 606491 + g 87 -5.4 -5.52986 | GCCGCATGTTTGTTT TCCT AAG AGGA TTTTTTTACTAGACT Msm_0627 607573 - 608514 + | tetrahydromethanopterin S-methyltransferase subunit H Msm_0628 609078 - 608587 - | hypothetical protein TERM 422 609130 - 609155 + H 70 -4.1 -5.14819 | ATTTTCTCCTTCTTT TGAGTCTGTAA AATT TTATAGGCTTA TTTGTTTTTTAATTT Msm_0629 609284 - 610489 + | putative transposase TERM 423 611099 - 611087 - g 74 -7.7 -3.78018 | CAAAAAGTAGCCAAA CAGCT GAA AGCTG AAATAGGCAAAAATG Msm_0630 610610 - 611467 + | hypothetical protein Msm_0631 611553 - 612074 + | transcription initiation factor E subunit alpha Msm_0632 612081 - 612575 + | HD superfamily hydrolase Msm_0633 612578 - 613492 + | archaeosine tRNA-ribosyltransferase Msm_0634 613697 - 613981 + | metal-sulfur cluster biosynthetic protein Msm_0635 614250 - 614765 + | regulator of amino acid metabolism TERM 424 614775 - 614785 + T 81 -6.8 -4.85433 | opp_overlap 614775 TACTGATTCAAATCA GCCA TTC TGGC TTTTTCCATTTCTCT Msm_0636 615034 - 614759 - | hydrogenase expression/formation protein, HypC TERM 425 614838 - 614860 + g 80 -9.2 -3.67134 | AAAAGTTCTTCCCAA GCTTCTAAAG ATT CTTTAGCAGC TTCTTCAGATAGTTT TERM 426 615844 - 615855 + G 81 -4.4 -5.40072 | TAAAAATGAAGAATT GGAA GGAG TTCC TTTTTTTGCAACAGG Msm_0637 615128 - 616429 + | dihydrolipoamide dehydrogenase Msm_0638 617478 - 616432 - | UDP-glycosyltransferase Msm_0639 618447 - 617485 - | putative cell wall biosynthesis protein Msm_0640 619613 - 618552 - | cell division protein (RNA-binding), PelA Msm_0641 619660 - 620970 + | prephenate dehydrogenase TERM 427 622694 - 622679 - g 76 -3.3 -5.41746 | opp_overlap 622679 AAGTTCTTAAAAAAA TCGTT GTTACA AACGA TGACTTTAAATCAGC Msm_0642 621352 - 623544 + | cell division protein CDC48 TERM 428 623546 - 623570 + F 100 -8.7 -5.40474 | opp_overlap 623548 TTCAGTATATCTAGA TAGGGAAGA TTAAATT TCTTCCCTA TTTTTTTAAAACAAT TERM 429 623868 - 623882 + G 76 -7.2 -4.26189 | opp_overlap 623867 623868, overlap 623868 TAGACAGCTTAGAAT GAAAGA TTT TCTTTC TTTTGGAATTTCTGA Msm_0643 623656 - 624489 + | hypothetical protein TERM 430 624764 - 624754 - g 71 -5.4 -4.56702 | TTGGAAGTAAATAAA GCTA AAT TAGC TCAGGAATACGGTGC Msm_0644 624511 - 625785 + | thiamine biosynthesis protein ThiC TERM 431 626602 - 626579 - g 74 -3.2 -5.33405 | overlap 626581 GTGATGAAATAAAAA TATTTACAAG AAGA CTTGAAAACA TCACCCATGCACTGC Msm_0645 625786 - 627441 + | ATP-dependent DNA ligase, Cdc9 Msm_0646 628073 - 627435 - | hypothetical protein TERM 432 627862 - 627872 + g 71 -6.8 -3.96624 | opp_overlap 627860 627862 AATCCTAAATAAATA GCCA TTC TGGC TTTCTGATAACCGTA Msm_0647 628177 - 628572 + | RNA-binding protein Msm_0648 628702 - 630081 + | phosphomannomutase, ManB Msm_0649 630961 - 630062 - | hypothetical protein Msm_0650 631577 - 630954 - | TetR/AcrR family transcriptional regulator Msm_0651 632853 - 631717 - | O-linked GlcNAc transferase Msm_0652 633580 - 632876 - | pyruvate formate-lyase activating enzyme, PflA Msm_0653 634680 - 633580 - | histidinol-phosphate aminotransferase Msm_0654 635166 - 634690 - | carbonic anhydrase Msm_0655 636467 - 635178 - | glucose-1-phosphate thymidylyltransferase TERM 433 636583 - 636563 - R 100 -6.9 -5.94597 | GAAGATTAAAAAAAA CATGCAG TAATCCG CTGCATG AAAAAGAATTTAAAT Msm_0656 637966 - 636593 - | phosphomannomutase, ManB TERM 434 636655 - 636669 + g 72 -7.2 -3.87505 | GAGCTTTTGTGCTGT CTTTAG ACT CTAAAG TTATTCTAATATAAT TERM 435 636699 - 636685 - G 71 -8.6 -2.80245 | overlap 636684 TTATTCTAATATAAT CTTCAG TTC CTGAAG GCCTTACTAAAACCC Msm_0657 639182 - 637944 - | cofactor-independent phosphoglycerate mutase Msm_0658 639442 - 639254 - | hypothetical protein Msm_0659 640177 - 639479 - | hypothetical protein Msm_0660 640271 - 640909 + | LemA protein Msm_0661 641559 - 640978 - | 30S ribosomal protein S3Ae TERM 436 641449 - 641461 + g 71 -7.7 -3.40022 | overlap 641442 641448 ATCAGGGTCTCTTGC TGGAG TTT CTCCA ATTTCTTTGTCTTCA TERM 437 641623 - 641608 - R 75 -6.2 -4.60487 | opp_overlap 641613, overlap 641613 TATTATCGTTAAAAA TATAGC TATC GCTATA GTAAATTTAAAAATA TERM 438 641735 - 641749 + r 81 -8.6 -4.17048 | CGTTAATCGACTACT GTGAGT TTT ACTCAC TTATTTTAAAGAACA TERM 439 641975 - 641964 - R 71 -3 -5.70761 | AAAACAAAATAAAAA TATG ATTT CATA ACACTAGTTGGAAAA TERM 440 642012 - 641991 - R 76 -7.4 -4.12456 | opp_overlap 641991 641994, overlap 641994 ACACTAGTTGGAAAA TAAGGAGT ATTAAA ACTCCTTA TTCCATACTAGGCAA Msm_0662 642372 - 642010 - | putative flagellar protein, FliL TERM 441 642700 - 642690 - R 76 -6.8 -4.50298 | overlap 642687 TAAAGCGAAAAATAA TGGC ACA GCCA GCAGATCATTGAGAT Msm_0663 643269 - 642946 - | dinitrogenase iron-molybdenum cofactor biosynthesis protein Msm_0664 643840 - 643271 - | NADPH-dependent FMN reductase family multimeric flavodoxin TERM 442 643611 - 643623 + g 72 -3.4 -5.13521 | GCAGGAATAAATCCG TCAG CCTGT CTGA TTTTTTCAATGATTT Msm_0665 644657 - 643899 - | 5'-methylthioadenosine phosphorylase TERM 443 644369 - 644355 - G 72 -5 -4.87318 | TGTAAAATCTAAAAA GTCATC GGG AATGAC AAATGATCCAGGAGG Msm_0666 646112 - 644664 - | hypothetical protein TERM 444 646074 - 646085 + g 71 -3 -5.30189 | overlap 646082 TGGAACTTCGTATAC GTTA TCTC TAAC TTTTTTAATGTTATC TERM 445 646370 - 646335 - R 100 -12.2 -4.42386 | overlap 646369 TGTTTATTTACAAAA GCTTTATTAAGAAAAT TTTT ATTTTCTAAATAAAGC AGATATTCCTGCAAC Msm_0667 646673 - 646353 - | hypothetical protein Msm_0668 647132 - 646710 - | hypothetical protein Msm_0669 647226 - 647405 + | hypothetical protein TERM 446 647392 - 647409 + F 73 -4.2 -5.39755 | TAACTGCGCAAAATC CCAATT TAGTAT AATTGG TTTTTTCTGATTATA TERM 447 647535 - 647569 + G 85 -10.8 -3.28712 | opp_overlap 647534 647533 ATTCAGATATGAAGT TTTGTCAGTCATGTGC AAT GCCCATGACTGAAGAA TTATACGGCAGCAAC Msm_0670 647477 - 647773 + | hypothetical protein cdc6 648895 - 647777 - | cell division control protein 6 Msm_0672 649643 - 648924 - | thiamine pyrophosphokinase TERM 448 649278 - 649290 + g 73 -7.7 -3.71378 | opp_overlap 649277 GTGAATAACTAAACT TGCAC CAT GTGCA TTTGCATATAAAATA Msm_0673 650261 - 649692 - | hypothetical protein Msm_0674 650452 - 650652 + | hypothetical protein Msm_0675 650639 - 650914 + | hypothetical protein Msm_0676 651708 - 651034 - | hypothetical protein Msm_0677 651821 - 652963 + | aspartate aminotransferase TERM 449 652946 - 652969 + F 100 -6.8 -6.47325 | opp_overlap 652949 652952, overlap 652947 GGAGTAGCATCCATT ACAGAATCAT ACTT ATGATTCTGC TTTTTTTTCTTTTTT TERM 450 652947 - 652968 + F 89 -10.3 -4.40159 | opp_overlap 652949 652952, overlap 652946 GAGTAGCATCCATTA CAGAATCAT ACTT ATGATTCTG CTTTTTTTTCTTTTT Msm_0678 653264 - 653893 + | hypothetical protein Msm_0679 653903 - 654325 + | hypothetical protein TERM 451 654325 - 654346 + T 78 -5.9 -4.89063 | opp_overlap 654327, overlap 654327 654345 ATTAATAAGAAAATA AATGAAGAC AATT GTCTTCATA TTTATTTTTAAATAA TERM 452 654344 - 654327 - T 93 -8.5 -4.96427 | opp_overlap 654327 654325 TAATAAGAAAATAAA TGAAGAC AATT GTCTTCA TATTTATTTTTAAAT TERM 453 654327 - 654344 + T 80 -8.5 -4.05491 | opp_overlap 654327, overlap 654325 TAATAAGAAAATAAA TGAAGAC AATT GTCTTCA TATTTATTTTTAAAT Msm_0680 655878 - 654664 - | ATPase Msm_0681 656200 - 656994 + | hypothetical protein Msm_0682 657030 - 657233 + | hypothetical protein Msm_0683 657350 - 657772 + | hypothetical protein Msm_0684 657815 - 658369 + | hypothetical protein TERM 454 658376 - 658360 - g 83 -6.7 -4.8667 | CAGAGGTGATAAAAA TGAAAAA TGA TTTTTCA GGATTTGCAAAACAC Msm_0685 658359 - 658649 + | hypothetical protein Msm_0686 660180 - 658642 - | acetolactate synthase (TPP-requiring), large subunit, IlvB TERM 455 660113 - 660094 - G 74 -6.4 -4.39828 | AAGAGCCTTATAAAA CGGCAGAA TCTG TTCTCCCG GAAGTCCGAAAATAT Msm_0687 660638 - 660183 - | deoxycytidine-triphosphate deaminase, Dcd Msm_0688 660706 - 660894 + | 4-oxalocrotonate tautomerase TERM 456 660874 - 660914 + T 71 -8.6 -2.77701 | opp_overlap 660877 660881, overlap 660882 GGAGTAGCTGGTGAA TTATTAAGTGATAGGGAA TAAAT TTCCTTATCATTTAATCA TAATATTCATACCAT TERM 457 660882 - 660906 + T 76 -8 -3.81689 | opp_overlap 660881 660877, overlap 660874 TGGTGAATTATTAAG TGATAGGGAA TAAAT TTCCTTATCA TTTAATCATAATATT Msm_0689 661042 - 660908 - | hypothetical protein Msm_0690 664097 - 661227 - | helicase TERM 458 662852 - 662869 + g 79 -8.5 -3.93984 | opp_overlap 662838 CCAACTGATTGAATT CTGTTGA ATCA TCAACAG TTTCTCCATCAATTT TERM 459 663462 - 663473 + g 81 -4.4 -5.4588 | ATTTGGGACCAAATC CTCA GAGC TGAG TTTTTTGTAGTTTTC TERM 460 663554 - 663536 - G 74 -9.6 -2.58758 | opp_overlap 663535 663532 663536, overlap 663535 ATAACTTTTCATAAG CCGGAAGA ACA TCTTCCAG ATTGTTTGCTTCATC TERM 461 663814 - 663792 - G 71 -7.8 -3.41341 | opp_overlap 663797 AATGTTATCTAAAGA CTGAAGCTTT TTT AAAGCTTTAG GATCTGTAAAATTAA Msm_0691 664489 - 664103 - | mutator mutT protein TERM 462 664426 - 664440 + g 86 -5.8 -5.43329 | ACTCGCCATATCCTC TTTTAG TAG CTAAAA TTTTGTTTTCTTTTT Msm_0692 664967 - 664506 - | hypothetical protein Msm_0693 666936 - 664960 - | ATPase involved in DNA repair, SbcC TERM 463 665685 - 665707 + g 80 -9.4 -3.52451 | opp_overlap 665690, overlap 665676 665683 665688 AAATTTGATTAATTT GAATATTAAT CTC ATTAATATTC TCTTCATTTTGTTTT TERM 464 666474 - 666457 - G 72 -3.5 -5.14965 | AGCTCCATTAAAAAA GAAATAT TGGA ACATTTC TTTAGGGATTTTATT TERM 465 666620 - 666631 + g 77 -3 -5.63374 | opp_overlap 666619, overlap 666619 AACGATCTATAAATT GAAA AATA TTTC TTTTTTTCATCTTCA Msm_0694 667110 - 666943 - | hypothetical protein Msm_0695 669131 - 667107 - | DNA repair helicase TERM 466 669629 - 669597 - H 71 -7.9 -3.3062 | opp_overlap 669596 669607, overlap 669607 TTTAAATAGGATTAA CACCAAAACATTATT AAA AATAATTATTTGGTG AAATTTTTATGGCTT TERM 467 670228 - 670210 - g 81 -3.2 -5.88476 | AAAAGAAATAAAAAA GAAAAAAA TAA TTTTTTAC GATAATAATCTTCTA TERM 468 671137 - 671122 - g 85 -2.6 -6.14618 | TACAAAACAAAAAAA TGAAAT TGAA ATTCCA TACAGAATAAATGCT Msm_0696 669638 - 671158 + | Fe-S oxidoreductase TERM 469 671299 - 671269 - T 93 -7 -5.3658 | ACTACAAAAATAAAA TTAAAGCGAGAAAA ATC CTTTCTCACTTAAA CAATAACTTTTTCAA Msm_0697 671732 - 671295 - | hypothetical protein TERM 470 672225 - 672207 - g 72 -2.4 -5.41746 | AAGTCTGGAAAAAAA GAAACAGA AAG CCTATTCC AAAAGAAAGAAACTT Msm_0698 671869 - 672246 + | hypothetical protein Msm_0699 673845 - 672388 - | SNF family Na(+)-dependent transporter TERM 471 673334 - 673344 + g 74 -3.2 -5.44119 | ACTTTGCCTATTCCT GAGT TCA GCTC TTTTTTTGAAATAAA Msm_0700 674920 - 673835 - | putative poly-gamma-glutamate synthesis protein, PgsA Msm_0701 676322 - 674910 - | signal recognition particle GTPase SRP54 TERM 472 675872 - 675884 + g 79 -3.3 -5.53436 | TATCTTTATTTCTGC TCCAG AAA CGGGA TTTTTTCTCTTCTGT TERM 473 675937 - 675962 + g 79 -4.9 -5.2166 | gap 1, overlap 675939 675940 TCTTCAGTGTCTTCC TCTTTATTTCTG CTC CAGAAAT-GAGA TTTTTTAGGTTCTTC Msm_0702 676879 - 676439 - | prefoldin subunit alpha Msm_0703 677114 - 676890 - | ribosomal protein LX TERM 474 677023 - 677036 + g 78 -6.7 -4.41237 | opp_overlap 677023 TTTTCTTCTAAATCA GCTAC ATTG GTAGC TTTGTATTCTTTAGT Msm_0704 677807 - 677136 - | translation initiation factor IF-6 Msm_0705 678091 - 677846 - | 50S ribosomal protein L31e Msm_0706 678259 - 678104 - | ribosomal protein L39a Msm_0707 678865 - 678281 - | subunit of tRNA methyltransferase Msm_0708 679227 - 678871 - | hypothetical protein Msm_0709 679688 - 679251 - | 30S ribosomal protein S19e Msm_0710 680051 - 679794 - | RNA-binding protein Msm_0711 680385 - 680020 - | ribonuclease P, subunit RPR2 TERM 475 680504 - 680492 - H 71 -6.3 -4.26622 | overlap 680485 AAACCATAGTTAAAA TAACC TTA GGTTA ATATGAATATTAGGA Msm_0712 680667 - 681077 + | hypothetical protein TERM 476 681086 - 681060 - T 73 -6.8 -4.26076 | opp_overlap 681063, overlap 681063 GTACGTTTAGTAAAA GAACATTATTTA TTT TAAATAATGTTT TAACTTTTTTTATCA TERM 477 681083 - 681063 - T 81 -8.5 -4.25256 | opp_overlap 681063, overlap 681060 CGTTTAGTAAAAGAA CATTATTTA TTT TAAATAATG TTTTAACTTTTTTTA TERM 478 681063 - 681083 + T 86 -8.5 -4.57275 | opp_overlap 681060 681063 CGTTTAGTAAAAGAA CATTATTTA TTT TAAATAATG TTTTAACTTTTTTTA TERM 479 681332 - 681320 - T 79 -4.9 -5.41941 | CAAACTAAATAAAAA GAAAT ATT ATTTC AATTATAAAAATAAA Msm_0713 681912 - 681367 - | nucleotide kinase Msm_0714 682352 - 681924 - | GTPase Msm_0715 683017 - 682355 - | GTPase TERM 480 683071 - 683048 - R 81 -8.3 -4.45473 | overlap 683065 TTAATTAAAAAAAGA GATTAGGAT TAAAAT ATCCTAATC AAAATTAAGCCCTGT Msm_0716 685844 - 683076 - | oligosaccharyl transferase, STT3 subunit TERM 481 686063 - 686045 - R 89 -6.1 -5.47914 | opp_overlap 686043 686045 686049 AAAAATTAGAAAAAA TAAAGTC TATTG GACTTTA TCTTTTAACTCATCT Msm_0717 688201 - 686051 - | DNA topoisomerase I, TopA Msm_0718 688521 - 688372 - | hypothetical protein TERM 482 688580 - 688554 - R 71 -3.3 -5.56573 | gap 1, opp_overlap 688555 688559, overlap 688559 AGAAATAAATAAAAA TTAAAGTAATTT CAGT AAATTACTT-AA TTAATATTGTATTTT Msm_0719 690166 - 688577 - | phosphoserine phosphatase SerB TERM 483 688704 - 688728 + g 93 -8.7 -4.90455 | TTACCGTTTGATGAG GAAGATTTGTT ACT AGCAGATCTTC TTTTTCTAGGTCTGT TERM 484 688866 - 688878 + g 80 -6.3 -4.84017 | opp_overlap 688875, overlap 688872 TCATCAGCTGCAGTT CTGAT ATC ATCAG TTTTTCTGAAGAATT TERM 485 689561 - 689575 + g 70 -4.3 -4.82667 | opp_overlap 689561 AATAATTTCATCTAA GACTT TGGTT AAGTC TTTTTCATCTACTAC TERM 486 689709 - 689695 - G 70 -7.2 -3.68222 | opp_overlap 689695 CTCCAACTGCAACAA CTTCTT CTA AAGAAG TGTCATTACCTTCAA Msm_0720 690724 - 690179 - | transcription factor TERM 487 690866 - 690852 - H 71 -2.9 -5.67529 | opp_overlap 690852, overlap 690846 690865 AAGTAAAAACAAAAA TATGT AATAA ACATA TTTTTTAATTAACTT Msm_0721 690919 - 691458 + | adenylate cyclase, class 2 aksA 691514 - 692686 + | trans-homoaconitate synthase Msm_0723 692696 - 693949 + | 3-isopropylmalate dehydratase, LeuC Msm_0724 693957 - 694520 + | 4-hydroxybenzoate synthetase (chorismate lyase) Msm_0725 694533 - 695516 + | flap endonuclease-1 Msm_0726 696163 - 695513 - | hypothetical protein Msm_0727 697454 - 696204 - | S-adenosyl-L-homocysteine hydrolase TERM 488 697392 - 697405 + g 74 -3.9 -5.21236 | AACTGGCATGTGTCT TTGAA CCCA TTCAA TTTTTCTTATACCTT TERM 489 697613 - 697601 - H 73 -4.9 -4.94902 | TAATTATTATAAAAA TAAAC AAT GTTTA ATTACAATCAGCCAA Msm_0728 697994 - 699160 + | aldo/keto reductase family oxidoreductase Msm_0729 699170 - 699925 + | molybdopterin biosynthesis protein, MoeB Msm_0730 701186 - 699981 - | putative transposase Msm_0731 705755 - 701289 - | putative DNA helicase II, UvrD TERM 490 701340 - 701315 - G 74 -4.1 -5.14819 | AAATTAAAAAACAAA TAAGCCTATAA AATT TTACAGACTCA AATTTATTAAATTCT TERM 491 702664 - 702680 + g 72 -3.7 -5.1356 | TTATAACAGTCTTCA GATGCTT TTA AAGTGTC TTTTTCTTCCTCAGA TERM 492 703076 - 703092 + g 71 -2.3 -5.42259 | TGTCATATTCTTCAA TGAAATT TAA AAATTCA TTTTTTTGAGAATCA TERM 493 704944 - 704961 + g 71 -2.1 -5.51078 | ATTTCAATAGCTAAA TTATAAA GCTC TTTATGA TTTTCTTTTTCTTTT TERM 494 705905 - 705895 - R 79 -2.6 -6.20267 | opp_overlap 705895 TTAAAAATAAAAAAA TAAA GTT TTTA ATAATTTATTTCCAC Msm_0732 706873 - 705911 - | H/ACA RNA-protein complex component Cbf5p TERM 495 706049 - 706067 + g 83 -4.6 -5.52909 | TTCACCTTTAAGTGT TTCAATAG CTA CTATGGAA TTTTTTTGAATATTG Msm_0733 707173 - 706952 - | 50S ribosomal protein L14e Msm_0734 707691 - 707173 - | cytidylate kinase rpl34e 707957 - 707691 - | 50S ribosomal protein L34e Msm_0736 708650 - 708075 - | hypothetical protein Msm_0737 709220 - 708660 - | adenylate kinase TERM 496 709176 - 709199 + g 74 -9 -3.17051 | gap 1, opp_overlap 709175 709174, overlap 709174 TTTATTAAGCAAAGT GGTACTTCCAG AAC CTGGAA-TACC TGTTAATACTACCAA Msm_0738 710625 - 709261 - | preprotein translocase subunit SecY TERM 497 709728 - 709739 + g 73 -4.4 -5.00616 | opp_overlap 709728 709736 CAATTTCACCCAAAA TTGG GAAA CCAA TTTTTTGGAAGACAC TERM 498 710680 - 710659 - R 83 -3.8 -6.17669 | AAGAAAAGAAAAAAA GAAACTAT AATTCG ATAGCTTC TCCTCCCATTTCTTC rpl15p 711100 - 710663 - | 50S ribosomal protein L15P rpl30p 711568 - 711110 - | 50S ribosomal protein L30P rps5p 712223 - 711582 - | 30S ribosomal protein S5P rpl18p 712807 - 712226 - | 50S ribosomal protein L18P rpl19e 713265 - 712819 - | 50S ribosomal protein L19e rpl32e 713721 - 713392 - | 50S ribosomal protein L32e TERM 499 713774 - 713758 - R 72 -8.1 -3.54146 | opp_overlap 713760 713765, overlap 713756 TTTGCTAATTAAATA TATTCCA TCT TGGAATA CTCTAGGATCTCTTC rpl6p 714273 - 713737 - | 50S ribosomal protein L6P TERM 500 713955 - 713998 + g 71 -8.4 -3.2218 | gap 1, opp_overlap 713955 713995, overlap 713954 TGTCAATTACTACAA CGTCTTTGTTTACTTTCACAG TCA TTG-GAAAGTGAGCAAATACG ATTTTCATATGATAT rps8p 714674 - 714282 - | 30S ribosomal protein S8P TERM 501 714529 - 714540 + g 71 -3 -5.29885 | opp_overlap 714529, overlap 714524 TCAATATATTCAAAA TTAC CAAT GTAA TTTTCTTTTTGCATT rps14P 714830 - 714687 - | 30S ribosomal protein S14P rpl5p 715359 - 714847 - | 50S ribosomal protein L5P Msm_0749 716084 - 715356 - | 30S ribosomal protein S4e Msm_0750 716439 - 716086 - | ribosomal protein L24p rpl14p 716846 - 716448 - | 50S ribosomal protein L14P rps17p 717169 - 716852 - | 30S ribosomal protein S17P Msm_0753 717461 - 717183 - | ribonuclease P, subunit P29 Msm_0754 717876 - 717535 - | translation initiation factor Sui1 Msm_0755 718083 - 717877 - | ribosomal protein L29p rps3p 718874 - 718122 - | 30S ribosomal protein S3P rpl22p 719338 - 718874 - | 50S ribosomal protein L22P rps19p 719761 - 719351 - | 30S ribosomal protein S19P rpl2p 720502 - 719777 - | 50S ribosomal protein L2P Msm_0760 720775 - 720515 - | ribosomal protein L23p TERM 502 720609 - 720625 + g 83 -5.9 -5.16841 | opp_overlap 720609 CGAGGAGTGATATGA GTAGTTA CTC TAGCTAC TTTTTCTTCGTATAA rpl4lp 721564 - 720800 - | 50S ribosomal protein L4P rpl3p 722577 - 721567 - | 50S ribosomal protein L3P TERM 503 722638 - 722653 + r 71 -6.2 -4.24002 | opp_overlap 722638 CAAATTTTTAAACAA TAGCTA TAAA TAGCTA TTTTCAGATTTGGAC TERM 504 722844 - 722824 - R 81 -9.9 -3.33696 | TTCTGCGCTAAGTAA TTTTTAGGA GAG TCCTAAAAA CATCAATGTATAAAA Msm_0763 723742 - 722915 - | hypothetical protein Msm_0764 724575 - 723961 - | ribosomal L11 RNA methyltransferase (SAM-dependent) Msm_0765 724646 - 726139 + | pyruvate carboxylase subunit A Msm_0766 726156 - 727073 + | biotin-[acetyl-CoA-carboxylase] ligase/biotin operon regulator bifunctional protein, BirA Msm_0767 728217 - 727063 - | selenocysteine synthase, SelA Msm_0768 728544 - 728218 - | hypothetical protein Msm_0769 729156 - 728635 - | fumarate hydratase, class I Msm_0770 730788 - 729343 - | cobalt ABC transporter, ATPase component, CbiO Msm_0771 731500 - 730781 - | cobalt ABC transporter, permease component, CbiQ Msm_0772 732091 - 731510 - | major facilitator superfamily permease Msm_0773 733887 - 732142 - | multidrug ABC transporter, ATPase component TERM 505 732391 - 732379 - G 80 -6.3 -4.74706 | opp_overlap 732358 TTCAACATCTAAAAA TGAAG TTG CTTCA TCCAATAAAATTACA Msm_0774 735677 - 733887 - | multidrug ABC transporter, ATPase component TERM 506 734289 - 734309 + g 75 -4.7 -5.06451 | overlap 734290 ATCAATAATATCGTC ACATTGGGT TAA ACTCAATGC TTTTTTAACATCATC TERM 507 734290 - 734308 + g 75 -8.2 -3.63148 | overlap 734289 TCAATAATATCGTCA CATTGGGT TAA ACTCAATG CTTTTTTAACATCAT TERM 508 734871 - 734847 - G 72 -9.3 -2.61106 | overlap 734844 734843 TACATCTACAACTGA TCCTGCAAGAA GTA TTCCTGCTGGA ATCAACAATGCAAAA Msm_0775 736873 - 735899 - | AraC family transcriptional regulator Msm_0776 737055 - 738875 + | hypothetical protein Msm_0777 739142 - 738870 - | hypothetical protein TERM 509 738974 - 738954 - G 71 -6.9 -4.12902 | opp_overlap 738954 738956 TAACCATTGGGAAAA TCCGGAGAT TTC ATCTCCAAA TTGTTTTTGAGCAAG TERM 510 739241 - 739255 + G 80 -7.2 -4.62783 | opp_overlap 739241 AAACAATGAAACCTA TGTCTA ATG TAGACA TTTTTACAATAACTG TERM 511 739754 - 739738 - g 78 -6.6 -4.47271 | GAAACTGAACTAAAA GAACTG TTTGC CAGTTC AGATAAGGATTTGGT TERM 512 741109 - 741098 - g 74 -2.2 -5.60864 | GATATACTAAAAAAA CAGC AATA GCTA AAAAAATACTTCATG Msm_0778 739231 - 741237 + | RNA-binding protein snRNP-like protein TERM 513 741263 - 741231 - T 79 -7.3 -4.66395 | gap 1, opp_overlap 741235 741238, overlap 741235 AAAAAAATATGAAAA GAAT-TAATCCTGA TAATTT TCAGGATTATATTC AAAATATTCACCGGG TERM 514 741258 - 741235 - T 71 -8.3 -3.19369 | opp_overlap 741235 741238, overlap 741231 AAATATGAAAAGAAT TAATCCTGA TAATTT TCAGGATTA TATTCAAAATATTCA TERM 515 741235 - 741258 + T 70 -8.3 -3.06315 | opp_overlap 741235 741231, overlap 741238 AAATATGAAAAGAAT TAATCCTGA TAATTT TCAGGATTA TATTCAAAATATTCA Msm_0779 741953 - 741234 - | metallo-beta-lactamase superfamily Zn-dependent hydrolase Msm_0780 743092 - 741965 - | hypothetical protein TERM 516 742307 - 742329 + g 71 -7.8 -3.38696 | opp_overlap 742302 742310 742313, overlap 742310 GTCAGACAAATCATT TAATGATGGA ATT TCCAGCATTA TCTCTTTATGTACAT Msm_0781 743276 - 743485 + | hypothetical protein Msm_0782 743487 - 743660 + | hypothetical protein Msm_0783 744693 - 743686 - | tungsten formylmethanofuran dehydrogenase, subunit F, FwdF Msm_0784 744893 - 744702 - | ferredoxin Msm_0785 745469 - 745011 - | phosphopantetheine adenylyltransferase Msm_0786 748934 - 745596 - | transglutaminase-like protein, putative cysteine protease TERM 517 747467 - 747480 + g 74 -5.3 -4.89339 | overlap 747463 AACCAGAAATAGTGA TGGTA GCAT TACCA TTTTTATCAGTAGTT TERM 518 750982 - 750958 - g 82 -2.8 -5.95286 | opp_overlap 750971, overlap 750963 ATTAAAAACAAAAAA GCAAACTCCA TGGTG TGGAGATTCC CCATGTTATAACTGT TERM 519 750977 - 750963 - g 72 -5.7 -4.53334 | opp_overlap 750971, overlap 750958 AAACAAAAAAGCAAA CTCCA TGGTG TGGAG ATTCCCCATGTTATA Msm_0787 749468 - 751012 + | Fe-S oxidoreductase TERM 520 751033 - 751019 - f 76 -4.4 -5.37345 | opp_overlap 751019 TGCAACTAGAAAAAA TTTTTA AAT TAAAAA TAATATAATAAATAA TERM 521 751243 - 751229 - g 77 -2.9 -5.57396 | ACAATCAATAAAAAA TAATG AAACA CATTA TACACCAAACAAAGG TERM 522 751989 - 751999 + G 83 -6.8 -4.77986 | opp_overlap 751988 751982 751981 751989 TATGAAACCGTAAAT GCAC AGG GTGC TTTTTACGTATTTCC Msm_0788 751071 - 752183 + | aspartate aminotransferase TERM 523 752639 - 752620 - g 72 -5.8 -4.53495 | gap 1, overlap 752622 GAAAAAAAATAAGAA GTCCTGCTA TTG TAGCAG-AC GGAAATCATCAGAAA TERM 524 752880 - 752863 - g 70 -6.3 -4.29396 | gap 1 AAGCAGCTACCAAAA CTCCTCAG GTA CTG-GGAG CACATAATATTAAAG Msm_0789 752187 - 753092 + | cation efflux system protein (zinc/cadmium/cobalt) TERM 525 753888 - 753870 - T 78 -6.2 -4.74406 | opp_overlap 753868 753870 AGAAAAAAATAGAAA TTATAAAA GGA TTTTATAA TATTAACTTAATTAT Msm_0790 754275 - 753883 - | CBS-domain-containing protein Msm_0791 755167 - 754235 - | 2-phosphoglycerate kinase TERM 526 755299 - 755277 - R 91 -5.7 -5.80727 | opp_overlap 755282 AAAAATAATAAAAAA GATAAGTAA GATAT TTACTCATC TAAAGAGATTATATT Msm_0792 755980 - 755291 - | calcineurin-like phosphoesterase Msm_0793 756518 - 755994 - | hypothetical protein Msm_0794 756781 - 756515 - | hypothetical protein TERM 527 756878 - 756862 - R 71 -8.1 -3.37368 | opp_overlap 756859 AATATATAAAGTTAA TTACGAA TTA TTCGTAA AATATAAAACTAAAA TERM 528 756978 - 756955 - R 84 -6.9 -5.08011 | opp_overlap 756954, overlap 756972 AAAATCTGTAAAAAA TGAATGAAA AAATAA TTTCATTCA ATGATTAAAACCAAA TERM 529 757049 - 757026 - R 75 -3.9 -5.62552 | opp_overlap 757026 AAAAAAATGAAAAAA TTGAAAGGA AATTAA TCCTTACAA TTATTTAGCGTTTTC Msm_0795 757946 - 757050 - | heterodisulfide reductase, subunit B, HdrB Msm_0796 759018 - 757969 - | heterodisulfide reductase, subunit C, HdrC TERM 530 758213 - 758226 + g 71 -3.1 -5.243 | gap 1 TAACCAGCATGAGCA GCAACG TTA CGT-GC TTTTTTAATGATTTC TERM 531 759113 - 759093 - H 74 -6.9 -4.12942 | CTAAATTTTTCAAAA GTGTAAGCT AAA AGATTACAC TACCAGTTATATTTT Msm_0797 759183 - 759935 + | archaeosine tRNA-ribosyltransferase Msm_0798 760352 - 759927 - | hypothetical protein Msm_0799 761279 - 760356 - | hypothetical protein TERM 532 761025 - 761039 + g 85 -5 -5.52023 | overlap 761023 CTGATTATTTAAATC GGCAAT CTG ATTGTC TTTTTTATTAATAAT Msm_0800 761621 - 761466 - | hypothetical protein Msm_0801 762718 - 761906 - | diphthine synthase TERM 533 763426 - 763407 - g 78 -5.8 -4.75308 | opp_overlap 763414 AGTAATAGCTAAAAA CAATAATG TAAA CATTACTG CTGTTGACATTAATA Msm_0802 762790 - 763797 + | methyltransferase Msm_0803 764446 - 763781 - | metal-dependent membrane protease Msm_0804 765526 - 764597 - | translation initiation factor aIF-2B, alpha subunit TERM 534 765865 - 765843 - R 100 -6.4 -6.11019 | opp_overlap 765847, overlap 765845 AAAAATTAAAAAAAA GATACAAGAT AAA ATCTTGTATA TCAATTAATCATAGA TERM 535 765863 - 765845 - R 87 -9 -4.63519 | opp_overlap 765847, overlap 765843 AAATTAAAAAAAAGA TACAAGAT AAA ATCTTGTA TATCAATTAATCATA Msm_0805 766553 - 765870 - | polar amino acid ABC transporter, ATPase component Msm_0806 767215 - 766565 - | polar amino acid ABC transporter, permease component TERM 536 767189 - 767158 - G 87 -5.2 -5.54894 | opp_overlap 767159 767162, overlap 767159 AAGTGAGTAAAAAAA TTTCTATGGAGGTA ATCA TACCTCCACATAAT TCTGTTATTACAGTA TERM 537 767188 - 767159 - G 79 -8.7 -3.9131 | opp_overlap 767159 767162, overlap 767158 AGTGAGTAAAAAAAT TTCTATGGAGGTA ATCA TACCTCCACATAA TTCTGTTATTACAGT TERM 538 767162 - 767185 + g 70 -8.2 -2.99178 | opp_overlap 767159 767158, overlap 767159 GAGTAAAAAAATTTC TATGGAGGTA ATCA TACCTCCACA TAATTCTGTTATTAC Msm_0807 768053 - 767232 - | polar amino acid ABC transporter, substrate-binding component TERM 539 768261 - 768232 - R 100 -6.6 -5.86609 | opp_overlap 768239 768252 TTAAAAAAAGAAAAA TTAGTAATGACT TTGAGG AGTCATTCCTAA ATGATGGTCTTCGCT Msm_0808 769098 - 768232 - | nitrogenase iron-molybdenum cofactor biosynthesis protein, NifB Msm_0809 769721 - 769161 - | hypothetical protein Msm_0810 770978 - 769737 - | activator of (R)-2-hydroxyglutaryl-CoA dehydratase TERM 540 769795 - 769778 - G 82 -7.7 -4.39166 | TTCCAGATACTAAAA GAGCAGC ACCT ACTGCTC CAATGTGTTGAGAAT TERM 541 770498 - 770512 + g 70 -7.2 -3.63694 | TATTATTTTCCATAG CTACAA CTT TTGTAG TTGTTGAACCTGAAT Msm_0811 771424 - 770981 - | hypothetical protein Msm_0812 771905 - 771429 - | hypothetical protein Msm_0813 773424 - 771883 - | hypothetical protein TERM 542 772720 - 772702 - G 70 -4.6 -4.75063 | ATAAAATCCTAAAAA TGACTCTG ATT CAAAATCA ACTTTAATTCTGCCG Msm_0814 774486 - 773482 - | phosphoribosylformylglycinamidine synthase-related protein (selenophosphate synthetase) Msm_0815 775624 - 774491 - | hypothetical protein Msm_0816 776137 - 775637 - | hypothetical protein Msm_0817 776466 - 777257 + | transcriptional regulator Msm_0818 777263 - 778072 + | transcriptional regulator Msm_0819 778069 - 778359 + | ArsR family transcriptional regulator Msm_0820 778377 - 778883 + | molybdenum cofactor biosynthesis protein, MoaB Msm_0821 779452 - 778928 - | orotate phosphoribosyltransferase Msm_0822 779701 - 779468 - | photosynthetic reaction center protein Msm_0823 782439 - 779770 - | phosphoenolpyruvate synthase/pyruvate phosphate dikinase, PpsA Msm_0824 782974 - 782510 - | GNAT family N-acetyltransferase Msm_0825 784030 - 783008 - | adenosylcobinamide amidohydrolase, CbiZ TERM 543 784076 - 784061 - R 89 -4.8 -6.23317 | opp_overlap 784061 ATAAAAAGAAAAAAA GAAATT AAAT AATTTC TTTTAGATTTACATC Msm_0826 785704 - 784085 - | thermosome Msm_0827 785841 - 786461 + | metal-dependent hydrolase Msm_0828 787320 - 786469 - | glycosyltransferase Msm_0829 788574 - 787525 - | aspartate-semialdehyde dehydrogenase TERM 544 787852 - 787840 - G 70 -6.3 -4.25681 | ATCCAACTCAACAAA TACTG CTT CAGTA TGGCCGTCAATAACA Msm_0830 789405 - 788584 - | dihydrodipicolinate reductase TERM 545 788900 - 788910 + g 84 -5.4 -5.39755 | overlap 788894 GTCATTGCAGTTCCA GATG GAG CATC TTTTTTCTGATTGTG Msm_0831 790312 - 789419 - | dihydrodipicolinate synthase Msm_0832 791529 - 790309 - | aspartate kinase rps17E 791919 - 791722 - | 30S ribosomal protein S17e Msm_0834 792247 - 791912 - | chorismate mutase Msm_0835 793235 - 792366 - | shikimate kinase Msm_0836 794314 - 793235 - | glycosyl transferase family protein TERM 546 793572 - 793582 + g 70 -4 -5.06735 | opp_overlap 793572 GTGAAATAAACATCA GAAA TAT TTTC TTTTTCTGCTTTATC cbiD 795396 - 794311 - | cobalt-precorrin-6A synthase TERM 547 795448 - 795422 - R 82 -9 -4.04185 | opp_overlap 795426 795427, overlap 795427 TATAAAAAAAGAAGA TAAAATTAAATC AAA GATTTAACTTTA TTAACAAGTTCATCT TERM 548 795443 - 795427 - R 81 -6.7 -4.90321 | opp_overlap 795426 795427, overlap 795422 AAAAAGAAGATAAAA TTAAATC AAA GATTTAA CTTTATTAACAAGTT Msm_0838 795687 - 795427 - | putative thioredoxin/glutaredoxin Msm_0839 795828 - 797909 + | ATP-dependent helicase Msm_0840 798223 - 797927 - | hypothetical protein TERM 549 798014 - 798030 + g 85 -8.1 -4.67641 | TTCAATATCTATATC CTTATCA TCA TGATAAG TTTTAGTTTTAAAAT Msm_0841 798532 - 798254 - | photosynthetic reaction center protein TERM 550 798741 - 798730 - g 83 -4.4 -5.53288 | TGGAAGTCAAAAAAA GACA GTTA TGTC GTGACTTAAAGCTAT TERM 551 798820 - 798810 - g 70 -4 -5.06816 | opp_overlap 798815, overlap 798815 ACTCCCCAAGAAAAA GAAA TTG TTTC AAACATCTTAAAGAA TERM 552 799055 - 799045 - g 74 -3.2 -5.46629 | AACAGCTTAAAAAAA TAGG ACA CCCA ATTGATAAAGTGGAA Msm_0842 798648 - 800312 + | radical SAM superfamily histone acetyltransferase TERM 553 800825 - 800815 - g 74 -5.4 -4.74453 | GAAGACAGTGAAAAA GCAA GTA TTGC AAAAGTACTGGAAGA Msm_0843 800389 - 801111 + | 2-deoxyribose-5-phosphate aldolase (DERA), DeoC TERM 554 801118 - 801098 - T 70 -7 -3.75465 | opp_overlap 801101, overlap 801101 TAACACCAAAACCAA TAAGATTC GATTA GAATCTTA ATCCATCACTTTTTT TERM 555 801483 - 801464 - T 75 -4.3 -5.69068 | opp_overlap 801464 TAAAAATATAAAAAA TTGACCA AGAAAA TGGCCAA TAGATTTAATAAATT Msm_0844 801709 - 801509 - | histone, HmtA TERM 556 801814 - 801830 + r 72 -8.1 -3.53091 | opp_overlap 801814 CATAATAGTATATCA TTTTCCA AAT TGGAAAA TTTAAAAAACAAAGT Msm_0845 803189 - 801909 - | 2-methylthioadenine synthetase, MiaB Msm_0846 803821 - 803195 - | uncharacterized Zn-finger protein Msm_0847 804332 - 803847 - | 3-isopropylmalate dehydratase, small subunit, LeuD Msm_0848 805331 - 804342 - | GHMP kinase family protein Msm_0849 806840 - 805344 - | molybdenum cofactor biosynthesis-related protein, MoaA Msm_0850 807014 - 807580 + | hypothetical protein Msm_0851 808623 - 807601 - | transcriptional regulator Msm_0852 809723 - 808626 - | ATP-utilizing protein TERM 557 809455 - 809468 + g 76 -5.3 -5.03314 | opp_overlap 809465 TTATTATTTTCTGCA GCTAT GAAA ATAGC TTTTTTAAAACTAGC Msm_0853 811029 - 809707 - | UDP-N-acetylglucosamine 2-epimerase, WecB TERM 558 809795 - 809806 + g 70 -4.4 -4.78029 | opp_overlap 809795 CCATCAAAAACCATA TGCA CTAA TGCA TTTTCATTTTCTTCA TERM 559 810254 - 810242 - G 71 -7.7 -3.39556 | opp_overlap 810242 810241, overlap 810240 AACGGTTTAATAATA TGGAC ATT GTCCA ATTCATTTAATTCAT TERM 560 810511 - 810497 - G 86 -10 -3.57144 | TTTGCTATTTCCAAA TGCCTG AAA CAGGCA TCAACTACAGTATTT TERM 561 811169 - 811159 - g 75 -2.6 -5.52096 | overlap 811164 AAATTGAAGAAAAAA TATA CGA TATA TTAAAAAAATATCAC Msm_0854 811125 - 811373 + | hypothetical protein TERM 562 811403 - 811371 - T 70 -4.9 -4.81249 | opp_overlap 811370 811373, overlap 811373 TTTGAAATGGAAAAA TAGAATTTGGGACAT CTT ATTTCCCGAATTCTT CTTTTTTATCAAAAC TERM 563 811401 - 811373 - T 76 -7.5 -4.02139 | opp_overlap 811370 811373, overlap 811371 TGAAATGGAAAAATA GAATTTGGGACAT CTT ATTTCCCGAATTC TTCTTTTTTATCAAA TERM 564 811373 - 811401 + T 88 -9.7 -4.72201 | opp_overlap 811373 811371, overlap 811370 TGAAATGGAAAAATA GAATTTGGGACAT CTT ATTTCCCGAATTC TTCTTTTTTATCAAA truA 812352 - 811480 - | tRNA pseudouridine synthase A Msm_0856 814683 - 812416 - | peptide ABC transporter permease Msm_0857 815392 - 814688 - | peptide ABC transporter ATPase Msm_0858 815586 - 816323 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Msm_0859 816331 - 816792 + | glycerol-3-phosphate cytidylyltransferase TERM 565 817077 - 817048 - g 79 -7.2 -4.46615 | GAGCATCAATGAAAA TAGTTCCGGACT TGCTTG AAACCGGAACTA AAGTTATTGACTTAA argC 816807 - 817826 + | N-acetyl-gamma-glutamyl-phosphate reductase Msm_0861 817878 - 818372 + | flavodoxin TERM 566 818741 - 818724 - g 76 -7.1 -4.30014 | TGTACCAACTCAAAA TGCATAA CCAA TTATGCA AATGAACCTATAGCT Msm_0862 818376 - 818855 + | aspartate carbamoyltransferase regulatory subunit TERM 567 818912 - 818878 - f 79 -9.4 -3.28791 | opp_overlap 818878 818885, overlap 818882 ATTCTTTTTTTATAA GTAACCATTTGGTTAC TAA GTTACCCAATAGTTAC AAAAAGCTTTTAAAA Msm_0863 818991 - 819392 + | pyridoxamine-phosphate oxidase (FMN-binding) Msm_0864 819772 - 819395 - | transcriptional regulator TERM 568 819705 - 819715 + g 84 -5.4 -5.4505 | opp_overlap 819705 ATATCCCTAATTAAT TGGA TAG TCCA TTTTTTATTAAACAA Msm_0865 821023 - 819824 - | putative glucose-methanol-choline oxidoreductase (FAD-dependent) TERM 569 821054 - 821069 + H 79 -4.8 -5.66338 | opp_overlap 821054 821056 CTTTTAAAAAAAATC TATAAC ATGA GTTATA TTTTTTATTGTATTT TERM 570 821187 - 821171 - H 71 -6.7 -3.9654 | overlap 821161 821184 821186 TAAACTCTAAAAATA GATAATA ATA TATTATC ATGGATATGAAACAA Msm_0866 821202 - 822572 + | Zn metalloprotease, TldD Msm_0867 822591 - 823148 + | AMMECR1-related protein TERM 571 823613 - 823630 + T 75 -2.8 -6.09888 | GTATTATATTATTTA TACAAT ATAGTC ATTGTA TTTTTTTTCTTCAAA Msm_0868 824097 - 823714 - | hypothetical protein Msm_0869 824348 - 825358 + | GTP1/OBG family GTPase Msm_0870 825427 - 826017 + | HSP20/alpha crystallin family molecular chaperone Msm_0871 827268 - 826063 - | putative transposase Msm_0872 828445 - 827438 - | glucosamine:fructose-6-phosphate aminotransferase (isomerizing), AgaS TERM 572 828640 - 828630 - g 71 -8.2 -3.35176 | TAATAACTACACTAA GCCC TGA GGGC AAAAGAAATGCAGCG Msm_0873 828560 - 829186 + | hypothetical protein TERM 573 829183 - 829172 - T 91 -5.8 -5.87996 | opp_overlap 829170 829172 GAATTAATAAAAAAA GGGT ATTC ACCC TAATTTTTAATTACA Msm_0874 830898 - 829183 - | adenine deaminase, AdeC Msm_0875 832122 - 830899 - | lysine-oxoglutarate reductase/saccharopine dehydrogenase (LOR/SDH) bifunctional enzyme Msm_0876 833169 - 832294 - | arginase/agmatinase/formimionoglutamate hydrolase, SpeB TERM 574 833207 - 833184 - R 100 -9.8 -5.46129 | opp_overlap 833182 833187 TAATAAATCAAAAAA GAACTAAATA AAAT TATTTAGTTC TCATAATTTTCATAT Msm_0877 833586 - 833197 - | translation initiation factor IF-5A Msm_0878 833760 - 834221 + | pyruvoyl-dependent arginine decarboxylase, PdaD TERM 575 834325 - 834315 - g 71 -6.8 -4.10657 | CCATATGTCGGAAAA CCTG AAT CAGG AGAAAAAGTTAAAAT Msm_0879 834225 - 836063 + | poly(P)/ATP NAD kinase inositol monophosphatase Msm_0880 836063 - 837478 + | UDP-N-acetylmuramyl tripeptide synthetase (Mur ligase) TERM 576 838244 - 838234 - g 74 -4 -5.252 | opp_overlap 838234 GATTCTGATAAAAAA GAAA TTA TTTC TAAATTAAATGACTA Msm_0881 837622 - 838491 + | porphobilinogen deaminase Msm_0882 838506 - 839462 + | 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase Msm_0883 839472 - 840077 + | orotate phosphoribosyltransferase TERM 577 840135 - 840115 - T 78 -4 -5.89659 | overlap 840118 ATAAAAAAAGAAAAA GAATAGTC ATAAA GACTAATC ATAATTTTAAATTAT Msm_0884 842414 - 840147 - | adhesin-like protein TERM 578 840540 - 840552 + g 72 -3.3 -5.1861 | overlap 840541 ATCTGTACTACTAGT GCCGT TAG ACGGA TTTTTTGATCCTCCA TERM 579 842059 - 842046 - G 74 -5.3 -4.90869 | opp_overlap 842053, overlap 842040 ACCATTAATCAAAAA TGCAA CATT TTGCA AAGTAAAATTATTAC TERM 580 842608 - 842627 + r 73 -5.1 -5.09173 | opp_overlap 842608 842603 AAAATAAAATCAAAA GAGATTA ATTGAA TAATCTC TTTTTTAAAATATTC TERM 581 842627 - 842608 - R 70 -5.1 -4.83677 | opp_overlap 842608, overlap 842603 AAAATAAAATCAAAA GAGATTA ATTGAA TAATCTC TTTTTTAAAATATTC Msm_0885 847824 - 842632 - | adhesin-like protein TERM 582 843073 - 843091 + g 87 -10.4 -3.70037 | CTTGTTATAAATGGT TGCTTCAA ATC TTGAAGCA TTTAAATAGTACTTG Msm_0886 848692 - 848222 - | hypothetical protein TERM 583 848446 - 848460 + g 90 -5 -5.82316 | TTTTGAAAGTGTAAC CTTTTG ATT CAAGAG TTTTTTTTGCATCAT TERM 584 849045 - 849065 + r 79 -9.8 -3.30443 | opp_overlap 849045 TTGTAAAAAATAAAA GCAGCTAT GAAAA ATAGCTGC TTAATGTACTAATAA TERM 585 849065 - 849045 - R 100 -9.8 -5.42198 | opp_overlap 849045 TTGTAAAAAATAAAA GCAGCTAT GAAAA ATAGCTGC TTAATGTACTAATAA Msm_0887 849485 - 849066 - | adenine nucleotide alpha hydrolase-like stress protein TERM 586 849736 - 849717 - R 77 -6.5 -4.59309 | AAAAAAAAGTTAAAA GCTATAG AATTAA CTATAGC CAAGTTAAATAAATC Msm_0888 851094 - 849751 - | glutamate dehydrogenase TERM 587 851043 - 851055 + g 70 -6.3 -4.21768 | opp_overlap 851035, overlap 851053 GATGGAATTCTGGTT CAGAA GGG TTCTG TTTTACAGTTAATTC Msm_0889 851571 - 851858 + | hypothetical protein Msm_0890 851893 - 852432 + | hypothetical protein Msm_0891 853818 - 852580 - | peptide chain release factor 1 Msm_0892 853932 - 854459 + | putative zinc-binding protein Msm_0893 854886 - 854449 - | acetyltransferase TERM 588 854575 - 854588 + g 74 -3.9 -5.26247 | overlap 854581 TTCATTATTTTCATT TACTT CCAA AAGTA TTTTGTTTATTTTAA Msm_0894 854963 - 855349 + | hypothetical protein TERM 589 856408 - 856391 - g 80 -7.7 -4.18401 | TCAGAGACGGCAAAA CTATCGG AGAT CCGACAG ACGGTGCTGTTTTAA Msm_0895 855361 - 857817 + | cation transporter HAD ATPase TERM 590 857899 - 857889 - g 70 -4 -5.07011 | opp_overlap 857889 CACATAAAGGAAAAA TATG ATT CATA TATCCTGACTACAAC TERM 591 857974 - 857937 - g 76 -7.2 -4.30809 | GAATACGGATCAAAA TTAGCTATTGAGTC TGGAAGTGAT GACACAATAGCTAA ACCACTTTTAAAAGA TERM 592 858279 - 858290 + G 72 -5.8 -4.37658 | opp_overlap 858256 ATTTTAAAATATGTT CCTG TAAA CAGG TTTTATGCAAGAATT Msm_0896 857814 - 858608 + | precorrin-6X reductase, CbiJ TERM 593 858877 - 858857 - T 89 -5.6 -5.5208 | opp_overlap 858857, overlap 858850 TGATAACAGAAAAAA TATTTAGA AAAAA TCTAAATA TTTATCCTTTAAGTT rps10p 859187 - 858879 - | 30S ribosomal protein S10P TERM 594 859021 - 859034 + g 83 -6.7 -4.79352 | CAGGAAGCTTTTCCT TCTCC ATCC GGAGA TTTTCTTGTAGGTAC TERM 595 859235 - 859217 - R 100 -6 -6.01725 | opp_overlap 859217 AATAAAAATAAAAAA GAAAGGAA CAA CCCCTTTC TTTTAATTAACTACT Msm_0898 860538 - 859258 - | elongation factor 1-alpha TERM 596 860643 - 860633 - R 75 -2.6 -5.9667 | opp_overlap 860633 860640, overlap 860640 AAAAATATAAAAAAA TTAA AAA TTAA ATTTTAATTATCCTA Msm_0899 862843 - 860651 - | elongation factor EF-2 TERM 597 860946 - 860959 + g 71 -5.3 -4.68424 | ATGTAATCTTGTGGA GTGTT AATG AACAC TTTTTGCATAGGTTC Msm_0900 863428 - 862868 - | 30S ribosomal protein S7P TERM 598 862978 - 862988 + g 71 -5.4 -4.68994 | opp_overlap 862978 862968 CTAAACATTCAGCAA CAGA TTT TCTG TTTTTAAATGCTGAT TERM 599 863155 - 863165 + g 76 -5.4 -5.07971 | CAGTAACTAAAACTT GAAC AGG GTTC TTTTTAGTTCTTTTG rps12P 863867 - 863442 - | 30S ribosomal protein S12P TERM 600 863764 - 863786 + g 70 -6.4 -4.28487 | CCTTCAAGAGGGTCT GCTTTAACAT CTA ATCTTAAAGC TTTCCTTTTGTAATC Msm_0902 866036 - 864381 - | methyl-coenzyme M reductase, alpha subunit, McrA Msm_0903 866832 - 866026 - | methyl-coenzyme M reductase, gamma subunit, McrG Msm_0904 867353 - 866847 - | methyl-coenzyme M reductase, D subunit, McrD TERM 601 867304 - 867322 + g 81 -9 -3.79519 | opp_overlap 867303 CTATTCGGATAAATT TTAATGTC AAT GACATTAA TTTCATCATGAAGTT Msm_0905 868690 - 867365 - | methyl-coenzyme M reductase, beta subunit, McrB Msm_0906 870086 - 869655 - | transcription elongation factor NusA-like protein TERM 602 869759 - 869779 + g 75 -4.7 -5.07053 | overlap 869762 TACGTTTGTTGGTAT TATCTGCTG TAA CAGTAGCTA TTTTTTCACCTGATT Msm_0907 870392 - 870093 - | 50S ribosomal protein L30e Msm_0908 871612 - 870401 - | DNA-directed RNA polymerase subunit A'' TERM 603 870994 - 871004 + g 70 -4 -4.97402 | TATCCTTAATATCAG CTTT TTT AAAG TTTTTCTGAATTTTA Msm_0909 874305 - 871621 - | DNA-directed RNA polymerase subunit alpha TERM 604 872329 - 872348 + g 76 -7.2 -4.30833 | ATGCTCATTAATTCT TTCCTGAG CTTC TTCAGGAA TTTCTTCATCATTTG TERM 605 872433 - 872449 + g 71 -8.7 -2.85069 | overlap 872430 TGTCTAAGAATTCTC TGGCTCT AGC AGGGCCA TACTCTTTAACGATT TERM 606 873437 - 873425 - G 73 -7.7 -3.5936 | GCTAAAGTTTTTAAA GGTCT TCC AGACC GGTGTCTTGCAGGAG Msm_0910 876143 - 874332 - | DNA-directed RNA polymerase subunit B' TERM 607 875534 - 875545 + g 72 -5.8 -4.51097 | CTACAACAAAGTTCT GACC TGAT GGTC TTTTGTCATAATTAG Msm_0911 877700 - 876156 - | DNA-directed RNA polymerase subunit beta'' rpoH 878172 - 877939 - | DNA-directed RNA polymerase subunit H TERM 608 878081 - 878092 + g 71 -3 -5.1615 | opp_overlap 878081 AGATTTTCAATATCA TAGT CAGC ACTA TTTTTTAAATCTTCA TERM 609 878501 - 878473 - R 73 -6.8 -4.16904 | AACATCATATATAAA GGTTTCGGAAAA ATTAA TTTTCCATAACC ACAAATATAATCAAT Msm_0913 879287 - 879015 - | hypothetical protein Msm_0914 880182 - 879532 - | O-linked GlcNAc transferase Msm_0915 880388 - 880197 - | hypothetical protein Msm_0916 880797 - 881660 + | hydroxyethylthiazole kinase, ThiM Msm_0917 881657 - 882286 + | thiamine monophosphate synthase, ThiE pgk 883515 - 882283 - | phosphoglycerate kinase Msm_0919 884229 - 883561 - | triosephosphate isomerase Msm_0920 884351 - 884698 + | hypothetical protein TERM 610 884722 - 884696 - T 76 -8.9 -3.24902 | gap 1 GAATATTATGACGAA TAGCAG-CTCAA ATTA TTGAGACTGCTA AATAGGATGTCCACT Msm_0921 885328 - 884720 - | surface protein TERM 611 884883 - 884905 + g 87 -7.8 -4.89009 | opp_overlap 884883 TCACAGGACAAATGA TCATCTTCAT AAT AAGAAGATGA TTTTTGATTAGATGT TERM 612 885118 - 885138 + g 79 -6.9 -4.71776 | opp_overlap 885126 TTAATCCTTTTTCAT CAGTTAAAG TTA CATTAACTG TTTTATTAGATATTC Msm_0922 885480 - 886394 + | tRNA-modifying enzyme Msm_0923 887031 - 886369 - | multimeric flavodoxin Msm_0924 888143 - 887028 - | succinyl-CoA synthetase, beta subunit, SucC TERM 613 888170 - 888184 + r 71 -8.6 -2.78388 | overlap 888169 ATTAGAAATTATATC CTGCTT CAA AAGCAG CTATGTTTTTATCTT Msm_0925 888698 - 888156 - | 2-oxoglutarate ferredoxin oxidoreductase subunit gamma Msm_0926 889584 - 888712 - | 2-oxoglutarate ferredoxin oxidoreductase subunit beta Msm_0927 890712 - 889585 - | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha Msm_0928 890933 - 890724 - | 2-oxoglutarate ferredoxin oxidoreductase, delta subunit, KorD TERM 614 891207 - 891193 - g 84 -3.5 -5.86609 | TGAAAAAAATAAAAA CACCG ATAAG CGATG AAGAAATAAGTGAAC TERM 615 891322 - 891312 - g 77 -3.2 -5.66684 | GAACTGATAAAAAAA GGAA AAA CTCC CATCAATACAAATGG Msm_0929 891177 - 891668 + | fumarate hydratase, FumA TERM 616 891668 - 891688 + T 74 -6.9 -4.03167 | opp_overlap 891671, overlap 891671 TGGAAAAAGTATTTA GAAGAAGAA TTA TTCTTCTGC TTCTTCTTCATCTTC Msm_0930 892408 - 891677 - | peptidyl-prolyl cis-trans isomerase, FKBP-type TERM 617 893660 - 893630 - g 82 -4.8 -5.38348 | opp_overlap 893631 893635, overlap 893631 AAAAAGATGAAAAAA TTAAAGCCATCAAA AGG TTAGATGACTTTAT TAGCTAATATTATCT TERM 618 893659 - 893631 - g 77 -8.3 -3.79348 | opp_overlap 893631 893635, overlap 893630 AAAAGATGAAAAAAT TAAAGCCATCAAA AGG TTAGATGACTTTA TTAGCTAATATTATC Msm_0931 892573 - 893667 + | hypothetical protein Msm_0932 894212 - 893670 - | hypothetical protein Msm_0933 894992 - 894219 - | cobalamin-5-phosphate synthase, CobS Msm_0934 896100 - 895000 - | phosphatidylglycerophosphatase A-related protein TERM 619 895929 - 895943 + g 72 -5.7 -4.3898 | AATGGTTGAAAGCTT CTGCT TTTTT AGCAG TTTTCTCAAAATCAT TERM 620 895999 - 895974 - G 77 -7.8 -4.09685 | CTTTACTTTTTAAAA TATTGACATT TTCAAC AATGTCAATA CCATCACTAACAGTA TERM 621 896706 - 896730 + G 74 -8.6 -3.30771 | overlap 896707 CACGGAATATTGCCT GTTCCAGCAC CTGCA GTGCTGGAAA TTCTAAAAGATATAA TERM 622 896707 - 896729 + G 87 -12.1 -2.58249 | overlap 896706 ACGGAATATTGCCTG TTCCAGCAC CTGCA GTGCTGGAA ATTCTAAAAGATATA TERM 623 897233 - 897216 - g 80 -5.6 -5.18357 | opp_overlap 897231 GAATTCATTAAAAAA TCCGTT GAAATT AACGGA AACATCTTTGATGTA Msm_0935 896169 - 897383 + | hypothetical protein TERM 624 897548 - 897536 - g 100 -7.7 -5.4477 | AAATCTGTAAAAAAA TGGGT TTT ACCCA CGAAGTTATTGACTT Msm_0936 897373 - 898056 + | transcription regulator-related ATPase, ExsB Msm_0937 898049 - 898540 + | HD superfamily hydrolase Msm_0938 898884 - 898537 - | hypothetical protein Msm_0939 900702 - 898993 - | pyruvate carboxylase subunit B TERM 625 899694 - 899712 + g 71 -5.2 -4.63218 | opp_overlap 899694 899697, overlap 899698 TAGTTGGAGTTACAA GAGGTGGG TAA CCCATGTC TTTTCTTACACGAGG Msm_0940 901925 - 900831 - | myo-inositol-1-phosphate synthase ubiA 902020 - 902871 + | prenyltransferase Msm_0942 902898 - 904475 + | hypothetical protein TERM 626 905615 - 905595 - g 80 -6.2 -4.78149 | opp_overlap 905607 TCTACAATGTAAAAA TACCTGCA TCATC TACAGGTA TAAACCATGTAGTTA TERM 627 906061 - 906082 + G 74 -5.9 -4.57275 | opp_overlap 906059 906061 TTTACTTAACAAATA TTCTGCAGA CTGT TCTTCAGAA TTTTAACTTTTTTTA Msm_0943 904568 - 906088 + | hypothetical protein Msm_0944 907812 - 906145 - | CMP-N-acetylneuraminic acid synthetase, NeuA Msm_0945 907896 - 908942 + | hydrogenase expression/formation protein, HypD Msm_0946 908944 - 909648 + | phosphoglycolate phosphatase Msm_0947 909660 - 910970 + | zinc metalloprotease Msm_0948 911221 - 910967 - | hypothetical protein TERM 628 911078 - 911094 + g 73 -4.5 -4.97405 | overlap 911074 GTCTTTAATTTGAGT TTGAGAA GCT TTTTCAA TTTCTTTTTCTAAAT Msm_0949 911691 - 911230 - | transcriptional activator Msm_0950 912949 - 911720 - | molybdopterin biosynthesis protein, MoeA TERM 629 912870 - 912854 - G 74 -9.5 -2.61728 | opp_overlap 912854 912859, overlap 912853 ATCTTCAACAGCAAT CTCTTCA CTT TGAAGAG TGTAATATTTATCAA TERM 630 912854 - 912870 + g 76 -9.5 -2.99719 | opp_overlap 912853 912854, overlap 912859 ATCTTCAACAGCAAT CTCTTCA CTT TGAAGAG TGTAATATTTATCAA Msm_0951 913024 - 913368 + | translation initiation factor IF-1A TERM 631 913461 - 913450 - g 77 -4.4 -5.15117 | CAAAAGTCCAAAAAA TACG AGAA CGTA AAAGGCGAAAAGGTA Msm_0952 913407 - 914180 + | serine/threonine protein kinase Msm_0953 915069 - 914170 - | hypothetical protein Msm_0954 915207 - 915827 + | putative RNA-processing protein Msm_0955 916115 - 917830 + | DNA topoisomerase VI subunit B Msm_0956 917844 - 918944 + | DNA topoisomerase VI subunit A TERM 632 918965 - 918982 + F 100 -7.1 -5.80727 | opp_overlap 918965 TTCCTTAAAATTCAA GCAAATT TTTT AATTTGC TTTTTTCTTATTTTT TERM 633 919995 - 919979 - g 72 -7.3 -3.78409 | overlap 919980 CCAATTCAATGTAAA CGGTGTA TTC TACACCA GATATACCAATGAAA TERM 634 919994 - 919980 - g 71 -8.6 -2.86564 | overlap 919979 CAATTCAATGTAAAC GGTGTA TTC TACACC AGATATACCAATGAA Msm_0957 919383 - 921245 + | adhesin-like protein Msm_0958 921284 - 921718 + | 1,4-beta-cellobiosidase TERM 635 921706 - 921730 + F 83 -3.6 -6.12458 | opp_overlap 921707, overlap 921707 TGGATCAGGTATTAT AGATGTAAGC TAAAT GTTTACATCA TTTTTTCTTTTTTTA TERM 636 921707 - 921729 + F 76 -7.1 -4.21984 | opp_overlap 921707, overlap 921706 GGATCAGGTATTATA GATGTAAGC TAAAT GTTTACATC ATTTTTTCTTTTTTT TERM 637 922091 - 922121 + G 78 -2 -5.78622 | opp_overlap 922096, overlap 922096 ATTGGCTGATGTATC TACAATTTTAGAAT ATT ATTCTAGAATTTAA TTTTTTTTAAAATAA TERM 638 922096 - 922116 + G 76 -6.3 -4.59251 | opp_overlap 922096, overlap 922091 CTGATGTATCTACAA TTTTAGAAT ATT ATTCTAGAA TTTAATTTTTTTTAA Msm_0959 921861 - 922121 + | hypothetical protein Msm_0960 922177 - 924003 + | cation transporter HAD ATPase Msm_0961 924081 - 924293 + | heavy-metal cation transporting ATPase Msm_0962 924430 - 925446 + | glyceraldehyde-3-phosphate dehydrogenase Msm_0963 925473 - 926309 + | endonuclease IV Msm_0964 927381 - 926311 - | calcineurin-like phosphoesterase TERM 639 926398 - 926413 + g 74 -3.2 -5.41746 | opp_overlap 926398 TACTCCAGTAGTAAC TGACAG ATAA CTGCCA TTTTTTTCAAAAATT TERM 640 927730 - 927713 - g 71 -7.7 -3.45762 | overlap 927712 927714 GCAATGAAAACAAAT CCTGCAG CATA CTGCAGA GGATTCAGCTGTGAA TERM 641 927729 - 927714 - g 72 -9 -2.66372 | overlap 927713 927712 CAATGAAAACAAATC CTGCAG CATA CTGCAG AGGATTCAGCTGTGA Msm_0965 927503 - 928459 + | 3-hydroxybutyryl-CoA dehydrogenase Msm_0966 928675 - 929799 + | 26S protease regulatory subunit hemA 931012 - 929813 - | glutamyl-tRNA reductase Msm_0968 931628 - 931002 - | bifunctional precorrin-2 oxidase/chelatase (siroheme synthase), CysG Msm_0969 932112 - 931630 - | metal-binding transcription factor Msm_0970 932517 - 932212 - | hypothetical protein TERM 642 932568 - 932558 - R 72 -2.6 -5.79588 | TCAAAATTAAAAAAA TAAT AAT ATTA AACTATAAATCCCAA Msm_0971 934309 - 932714 - | methyl-coenzyme M reductase, component A2 TERM 643 933828 - 933843 + g 73 -7.6 -3.61654 | ACATGAGTAATCCTG TGGTTC ATCT GAACCA TTTCCAGTAAGTCTA TERM 644 934131 - 934141 + g 71 -6.8 -3.97388 | opp_overlap 934126, overlap 934127 TTAAAGATAACCTGA CCTG CAT CAGG TTTGTAATCCAATGT Msm_0972 935111 - 934401 - | tRNA-dihydrouridine synthase Msm_0973 935906 - 935142 - | GTP cyclohydrolase III Msm_0974 936829 - 935924 - | LPPG:FO 2-phospho-L-lactate transferase Msm_0975 937621 - 936848 - | F420-0--gamma-glutamyl ligase Msm_0976 938271 - 937645 - | IMP cyclohydrolase TERM 645 937697 - 937707 + g 93 -6.8 -5.37345 | opp_overlap 937688 937686 937689 AAAACAGCCGCACCA GCAG TTA CTGC TTTTTTGTAATTGGC TERM 646 937836 - 937822 - G 93 -10 -4.43208 | opp_overlap 937819 937818 ATATGTGGAAATAAA TACGGC TTC GCCGTA TGGGATTTTGTCAAC Msm_0977 938700 - 938284 - | biopolymer transport protein ExbD/TolR family Msm_0978 939548 - 938709 - | biopolymer MotA/TolQ/ExbB proton channel family transporter Msm_0979 940245 - 939622 - | ribonuclease HII, RnhB TERM 647 940296 - 940274 - R 93 -6.5 -5.32608 | AAAAAAGTTAAAAAA GAAATAATT GAAAA AATTATTTC ATAGCTCTAAGACGA Msm_0980 941363 - 940290 - | rod shape-determining protein Msm_0981 942001 - 941366 - | hypothetical protein Msm_0982 942334 - 943044 + | phosphatidylserine synthase, PssA TERM 648 943138 - 943121 - g 71 -8.5 -2.82759 | overlap 943110 AAGAGATCCATTATA TCCTCAA GGAT TTGAGGA TATAGATAACCTTAA Msm_0983 943089 - 944261 + | hypothetical protein TERM 649 944922 - 944944 + G 77 -7.8 -4.06866 | overlap 944925 TTTACATATTAGCTA TAGTGCTGAT TAT ATCAGCAATA TTATTCTATTTCTAC TERM 650 944925 - 944941 + G 74 -9.5 -2.75036 | overlap 944922 ACATATTAGCTATAG TGCTGAT TAT ATCAGCA ATATTATTCTATTTC Msm_0984 944300 - 945022 + | sortase (surface protein transpeptidase), SrtA Msm_0985 945026 - 945394 + | hypothetical protein Msm_0986 946390 - 945440 - | conjugated bile salt acid hydrolase (CBAH) Msm_0987 947638 - 946481 - | L-tyrosine decarboxylase Msm_0988 949972 - 947690 - | phosphoenolpyruvate synthase TERM 651 948193 - 948205 + g 79 -4.9 -5.19261 | CTAAGTTGGTGTAAC CTTTA TCA TAAAG TTTTTTAATAGCTTT rpl10e 950647 - 950165 - | 50S ribosomal protein L10e TERM 652 950852 - 950836 - R 72 -2.4 -5.85011 | opp_overlap 950839, overlap 950827 950839 GAAAAATTAAAAAAA TTATTT ATTTA AAATAA ATTTTGTTCTTTCCA TERM 653 950839 - 950853 + r 70 -4.4 -5.00196 | opp_overlap 950827 950836 950839 AAATTAAAAAAATTA TTTATT TAA AATAAA TTTTGTTCTTTCCAA Msm_0990 951585 - 950836 - | nitrate/sulfonate/bicarbonate ABC transporter, ATPase component TERM 654 951000 - 951020 + g 74 -4.1 -5.19261 | opp_overlap 951000 TAATATCATGAGTAA CAAACATTA CAG TAATTTTTG TTTTTTCATGGATTT TERM 655 951420 - 951437 + g 74 -5.7 -4.63527 | opp_overlap 951402, overlap 951402 TACCTCTATCAGGAG TGATTAA TCCA TTAATCA TTTTTAAAATAGTGG Msm_0991 953139 - 951595 - | nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding component Msm_0992 953407 - 953640 + | hypothetical protein TERM 656 953651 - 953635 - f 77 -3 -6.01369 | GAAACAACAAAAAAA GAATGA AAAAA CCATTC ACCTATTTAAAAACT TERM 657 953746 - 953730 - f 72 -2.4 -5.76237 | opp_overlap 953738, overlap 953723 953736 953738 TATATAAATAAAAAA TATAAA TATAT TTTATA AATAATTTCTTGATT TERM 658 954225 - 954210 - g 71 -7.6 -3.45434 | AACAATTCACCACAA CAGGAT TATT ATCCTG AAGAAGAGGTTAGCA Msm_0993 953796 - 955142 + | ATPase TERM 659 955132 - 955155 + T 71 -5.5 -4.55485 | opp_overlap 955135 AATTAATAGGTAATT TAATGAAAT AATTCA ATTTCATTA TTTACTTTTTTTCTA Msm_0994 956213 - 955131 - | nucleotidyltransferase TERM 660 955538 - 955554 + g 71 -6.7 -4.09685 | overlap 955541 CAGGCATCATATCCT TAACTTT ATC AAAGTTA TTTTCAACAATAGAC Msm_0995 959159 - 956304 - | adhesin-like protein TERM 661 959374 - 959360 - R 71 -5.7 -4.64346 | AAAAATTAAAAATAA GAGGT GAAAA ACCTC AAAAATTATCTTTTA Msm_0996 961770 - 959380 - | adhesin-like protein TERM 662 960739 - 960754 + g 77 -7.6 -3.99374 | CATCTTTATGGACTG TGCAAG AGAT CTTGCA TTATTATTAATAAAA Msm_0997 961940 - 963184 + | dihydroorotase, PyrC TERM 663 963239 - 963209 - T 100 -9.8 -5.99318 | opp_overlap 963212 AAAAAAAAAGAAAAA TGATGAAAAGGTGT AAT ACACCTATACATCA TATAAAGCGTGTTTA Msm_0998 964471 - 963230 - | polyferredoxin, MvhB TERM 664 963456 - 963430 - G 70 -7.4 -3.71848 | TTTCGCCATCAATAA CTTTTTCTATTG AAC CAACAGATAAAG CATCATTTGAACAAA Msm_0999 965912 - 964488 - | methyl viologen-reducing hydrogenase, alpha subunit, MvhA Msm_1000 966840 - 965914 - | methyl viologen-reducing hydrogenase, gamma subunit, MvhG Msm_1001 967281 - 966856 - | methyl viologen-reducing hydrogenase, delta subunit, MvhD TERM 665 967186 - 967217 + g 79 -10.2 -2.96395 | opp_overlap 967169, overlap 967188 AATAACTCTAATATT CGGTGGGTATTGCA TCCT TGCAGTACCTGCTG TGTCTGCTCCTCCAT TERM 666 967188 - 967215 + g 74 -9.2 -3.03443 | overlap 967186 TAACTCTAATATTCG GTGGGTATTGCA TCCT TGCAGTACCTGC TGTGTCTGCTCCTCC TERM 667 967608 - 967596 - R 100 -7.7 -5.70761 | opp_overlap 967596 967595 AAAAGAAAAGAAAAA GGGAT TAC ATCCC ATTTACGCTCATATC Msm_1002 968844 - 967600 - | ABC transporter involved in Fe-S cluster assembly, permease component Msm_1003 969574 - 968816 - | ABC transporter involved in Fe-S cluster assembly, ATPase component TERM 668 969752 - 969728 - R 75 -8.7 -3.39878 | overlap 969732 AAAAAAAATAGTCAA GTAACTGAAAA TAT TATTCAGTTAC AATAATGAATTCACC Msm_1004 970007 - 969741 - | photosynthetic reaction center protein Msm_1005 970686 - 970069 - | GTP:adenosylcobinamide-phosphate guanylyltransferase TERM 669 970569 - 970547 - G 71 -7.8 -3.5672 | opp_overlap 970546, overlap 970545 ACGGCAATAACAACA TCTTCAACTA ATT TAGATGAAGA AATATTATCAAGAAC Msm_1006 972177 - 970708 - | hypothetical protein Msm_1007 973276 - 972338 - | tetrahydromethanopterin S-methyltransferase subunit H Msm_1008 973534 - 973289 - | tetrahydromethanopterin S-methyltransferase subunit G mtrF 973753 - 973547 - | tetrahydromethanopterin S-methyltransferase subunit F Msm_1010 974482 - 973766 - | tetrahydromethanopterin S-methyltransferase subunit A TERM 670 974450 - 974464 + g 80 -7.1 -4.72201 | opp_overlap 974446, overlap 974451 TCCACTAATAACCGG CCAGC CAGCT GCTGG TTCTTTTTTATCAGC TERM 671 974451 - 974467 + g 71 -2.9 -5.24531 | opp_overlap 974446, overlap 974450 CCACTAATAACCGGC CAGCCAG CTG CTGGTTC TTTTTTATCAGCCAT Msm_1011 974812 - 974483 - | tetrahydromethanopterin S-methyltransferase subunit B Msm_1012 975641 - 974829 - | tetrahydromethanopterin S-methyltransferase subunit C Msm_1013 976344 - 975643 - | tetrahydromethanopterin S-methyltransferase subunit D TERM 672 976292 - 976279 - G 74 -6.7 -4.29106 | CCCTACAGGAATAAA GTGCA CACC TGCAC CAATCATAACTCCGC Msm_1014 977272 - 976358 - | tetrahydromethanopterin S-methyltransferase subunit E TERM 673 977471 - 977446 - R 75 -8.5 -3.43217 | opp_overlap 977450, overlap 977450 CTTAAATTTAAGGAA TAAATAGATGA AAAA TCACCTATTTA ACCTATTTGTTTCAA Msm_1015 979144 - 977489 - | methyl-coenzyme M reductase, alpha subunit, McrA Msm_1016 979908 - 979147 - | methyl-coenzyme M reductase, gamma subunit, McrG Msm_1017 980510 - 979911 - | methyl-coenzyme M reductase, C subunit, McrC Msm_1018 980979 - 980512 - | methyl-coenzyme M reductase, D subunit, McrD Msm_1019 982339 - 981008 - | methyl-coenzyme M reductase, beta subunit, McrB TERM 674 981118 - 981102 - G 90 -10.9 -3.90291 | ACTTCTTTAATTAAA CCAGAAG TTG CTTCTGG TGAAAAGAGTTGTGT TERM 675 981340 - 981323 - G 72 -7.1 -3.83102 | opp_overlap 981322 TAAACCAGTAGCAAA TTCAATG TTAT CATTGAA GTATAATAAAGTGGA TERM 676 982931 - 982914 - H 74 -5.7 -4.9181 | ATATAATACTAAAAA CATAATA AAAA TATTATG CAAGTTGTAGCAGAT Msm_1020 982929 - 984176 + | radical SAM family Fe-S oxidoreductase TERM 677 984202 - 984185 - T 70 -7.1 -3.59802 | overlap 984183 AATATAAAAAAAGTA GATGATT TAAG AATCATC AATAAGGGAACTTTC Msm_1021 985111 - 984191 - | hypothetical protein Msm_1022 985675 - 985160 - | hypothetical protein Msm_1023 985735 - 986427 + | 2-phosphosulpholactate phosphatase, ComB, (coenzyme M biosynthesis) Msm_1024 986477 - 987655 + | pheromone shutdown protein TraB Msm_1025 987710 - 987937 + | hypothetical protein Msm_1026 987969 - 989306 + | hemolysin-like protein TERM 678 990209 - 990185 - g 74 -6.5 -4.38141 | opp_overlap 990185 990186 990189 990207, overlap 990186 TTTGATAGAAAAGAA GGAATAATCCT ATT AGGACTATTCA TATTATATATGGCTT TERM 679 990208 - 990186 - g 82 -10 -3.22162 | opp_overlap 990186 990185 990189 990207, overlap 990185 TTGATAGAAAAGAAG GAATAATCCT ATT AGGACTATTC ATATTATATATGGCT Msm_1027 989303 - 990244 + | Ca2+/Na+ antiporter (K+-dependent) Msm_1028 991078 - 990212 - | ATPase Msm_1029 991133 - 991438 + | hypothetical protein Msm_1030 992558 - 991452 - | pyridoxal phosphate-dependent enzyme TERM 680 992278 - 992264 - G 82 -7.8 -4.58283 | CAATGTCTGCAAAAA CAGGAG TTG CTCCCG TATAAATAATTGAAT Msm_1031 992661 - 993827 + | N(2),N(2)-dimethylguanosine tRNA methyltransferase Msm_1032 994274 - 994750 + | Lpr family transcriptional regulator TERM 681 995496 - 995486 - g 70 -4 -5.06585 | GAAACTACACAAAAA GTAT TAG ATAC TGTAACTTTTGCTTC Msm_1033 994925 - 995860 + | GTP cyclohydrolase TERM 682 995978 - 995953 - g 84 -5.5 -5.37865 | TTAACAATGAAAAAA TCTTAATCGTC AGAG GAAGATCAAGA AAAACATTAGATATT TERM 683 995997 - 995983 - g 71 -2.9 -5.19251 | GAAGATCAAGAAAAA CATTA GATAT TAATG ACTTTAACTCAAAGC Msm_1034 995865 - 996305 + | hypothetical protein Msm_1035 996309 - 997391 + | FO synthase subunit 1 Msm_1036 998115 - 997378 - | methyltransferase Msm_1037 998324 - 998938 + | proteasome, beta subunit Msm_1038 999068 - 1000978 + | metal-dependent RNase TERM 684 1001064 - 1001050 - f 75 -2.8 -5.94743 | TAAAAAAAATAAAAA TACCAC TAG GTGTTA AAAAAATGGTTACTT Msm_1039 1001070 - 1002089 + | phosphoribosylaminoimidazole synthetase TERM 685 1002976 - 1002961 - g 70 -4 -4.99134 | overlap 1002962 ATTTCAAAGCAAAAA CTACAG ATTT CTGTAA TCAAGCCAGAGCTGC Msm_1040 1002117 - 1003145 + | malate/L-lactate dehydrogenase TERM 686 1003136 - 1003158 + T 81 -6.4 -4.8277 | opp_overlap 1003140, overlap 1003134 1003137 CTTTGATTCATATTT AGAAGAATAA TAT TTATTCTTCC TTATTTTTTATATTT TERM 687 1003137 - 1003157 + T 82 -9.9 -3.46002 | opp_overlap 1003140, overlap 1003136 1003134 TTTGATTCATATTTA GAAGAATAA TAT TTATTCTTC CTTATTTTTTATATT Msm_1041 1004946 - 1003159 - | DNA-dependent DNA polymerase I, PolB1 Msm_1042 1005996 - 1004950 - | permease Msm_1043 1006818 - 1006012 - | dihydroorotate dehydrogenase electron transfer subunit Msm_1044 1007733 - 1006822 - | dihydroorotate dehydrogenase 1B Msm_1045 1008365 - 1007793 - | glycosyltransferase Msm_1046 1008485 - 1009648 + | pre-mRNA splicing ribonucleoprotein PRP31 Msm_1047 1009652 - 1010293 + | fibrillarin TERM 688 1010583 - 1010573 - T 73 -4 -5.4477 | AAATGTTTAAAAAAA GTTA TTT TAAC TAAAAAATATTACTT Msm_1048 1011240 - 1010626 - | phosphopantothenoylcysteine synthetase/decarboxylase Msm_1049 1011780 - 1011274 - | phosphopantothenoylcysteine synthetase/decarboxylase Msm_1050 1012380 - 1011811 - | hypothetical protein Msm_1051 1013082 - 1012402 - | putative endoglucanase Msm_1052 1013941 - 1013135 - | prephenate dehydratase, PheA TERM 689 1013647 - 1013667 + g 83 -8.4 -4.19238 | opp_overlap 1013646 1013642 1013649 AATGAGAATATACAT CAGTTATG TCATT CATAACTG TTTTAGGATTGACAA TERM 690 1014022 - 1014005 - R 82 -7.1 -4.86216 | opp_overlap 1014007 ATAAAAAAGAAGAAA TAGCTAA AATA TTAGCTA TTAAAATTTAATTAA Msm_1053 1014852 - 1014034 - | IMP dehydrogenase related protein Msm_1054 1015873 - 1014935 - | IMP dehydrogenase related protein TERM 691 1015725 - 1015737 + g 74 -6.3 -4.41494 | overlap 1015715 ATCATTACTTTAGCA GTATC TTT GATAC TTTTAGTTGGAGGTA Msm_1055 1016654 - 1015956 - | coenzyme PQQ synthesis protein Msm_1056 1017178 - 1016657 - | 6-pyruvoyl-tetrahydropterin synthase Msm_1057 1017784 - 1017191 - | hypothetical protein Msm_1058 1017936 - 1019009 + | hypothetical protein TERM 692 1019163 - 1019150 - g 70 -3.9 -5.10077 | opp_overlap 1019150 AAAGAGGTTAAAAAA TGATA AATA TATCA TCTATAAAAATGTAT TERM 693 1019491 - 1019471 - g 75 -4.7 -5.09762 | overlap 1019473 ATTTTAACATAAAAA TATTGGCTC TCA AAGCCAAAA AGGCCATGAATATTC TERM 694 1019489 - 1019473 - g 76 -7.3 -4.17211 | overlap 1019471 TTTAACATAAAAATA TTGGCTC TCA AAGCCAA AAAGGCCATGAATAT Msm_1059 1019149 - 1019943 + | RecB family exonuclease Msm_1060 1020599 - 1019940 - | energy-converting hydrogenase B, subunit Q, EhbQ Msm_1061 1020843 - 1020601 - | energy-converting hydrogenase B, subunit P, EhbP Msm_1062 1021863 - 1020865 - | energy-converting hydrogenase B, subunit O, EhbO Msm_1063 1022995 - 1021868 - | energy-converting hydrogenase B, subunit N, EhbN TERM 695 1022918 - 1022902 - G 80 -6.5 -4.83615 | opp_overlap 1022871 CATCTTCTACAAAAA GCCTTAC TCT GTATGGC TCCAATGCAGCAGGG Msm_1064 1023460 - 1023014 - | energy-converting hydrogenase B, subunit M, EhbM Msm_1065 1023956 - 1023471 - | ferredoxin Msm_1066 1025372 - 1023957 - | energy-converting hydrogenase B, subunit K, EhbK Msm_1067 1025631 - 1025383 - | energy-converting hydrogenase B, subunit J, EhbJ Msm_1068 1026114 - 1025641 - | putative monovalent cation/H+ antiporter subunit B Msm_1069 1026389 - 1026111 - | energy-converting hydrogenase B, subunit H, EhbH Msm_1070 1026717 - 1026382 - | energy-converting hydrogenase B, subunit G, EhbG Msm_1071 1028171 - 1026714 - | hydrogenase subunit F TERM 696 1026848 - 1026860 + g 74 -6.3 -4.4261 | CCTTGTCAGGGACTT CCAAA CCT TTTGG TTTTGGTCTTAAAAA TERM 697 1026889 - 1026876 - G 71 -5.3 -4.56597 | opp_overlap 1026876 TTTTGGTCTTAAAAA CATTC CATA GAATG TTTTAACAAATACAA Msm_1072 1028550 - 1028164 - | putative monovalent cation/H+ antiporter subunit C Msm_1073 1028783 - 1028550 - | hypothetical protein Msm_1074 1029216 - 1028785 - | putative monovalent cation/H+ antiporter subunit G Msm_1075 1029479 - 1029216 - | putative monovalent cation/H+ antiporter subunit F Msm_1076 1029834 - 1029520 - | putative monovalent cation/H+ antiporter subunit E Msm_1077 1030165 - 1030293 + | putative permease (transport) Msm_1078 1030293 - 1031114 + | bile acid/sodium symporter Msm_1079 1031814 - 1031146 - | metal-dependent hydrolase Msm_1080 1032741 - 1031989 - | deacylase TERM 698 1032904 - 1032893 - gR 81 -3 -5.72053 | TAATGAAATAAAAAA TTTG TCTC CAAA GAAAAGAGAATCATT Msm_1082 1034894 - 1034730 - | hypothetical protein Msm_1081 1032807 - 1034783 + | DNA2/NAM7 helicase family transcriptional regulator Msm_1083 1035707 - 1034988 - | hypothetical protein Msm_1084 1036020 - 1037195 + | argininosuccinate synthase TERM 699 1037268 - 1037241 - T 100 -7.2 -5.99318 | opp_overlap 1037241 AAAAAAAAATAAAAA TTAGTTACTATC AACT AATAGCAACTAA TTAAATGGTCCAGGT Msm_1085 1038035 - 1037265 - | AraC family regulator TERM 700 1037997 - 1038008 + g 74 -3 -5.44119 | opp_overlap 1037997 AAATGTTCCAAGCAA TTCA GCAA TGAA TTTTTTTCCAATACC Msm_1086 1039549 - 1038050 - | hypothetical protein TERM 701 1039488 - 1039516 + g 83 -10.3 -3.21551 | overlap 1039492 1039513 1039514 TTTTTCTTAATTGTG TCAATGTCGGCTC TTT GAGCAGCCATTGA TTCATCAATCATTTT TERM 702 1039592 - 1039571 - H 74 -6 -4.54047 | opp_overlap 1039571 CCACTCCACAGAAAA GTTGAATT TAAAAT AATTCAAC TTATTTAATATATGT TERM 703 1040119 - 1040103 - g 79 -8.7 -3.89524 | ACTTTATTTTAGAAA GTGAAGG TAT CCCTCAC TGTACCTGCGGAGGA Msm_1087 1039670 - 1040392 + | NAD-dependent deacetylase Msm_1088 1040891 - 1040415 - | hypothetical protein TERM 704 1040908 - 1040897 - R 70 -4.4 -5.03994 | overlap 1040898 TTCCATACATAAAAA GTTG AGTT CAAC ACAAAATCGGAAGGA Msm_1089 1041069 - 1040872 - | hypothetical protein Msm_1090 1041854 - 1041135 - | sugar fermentation stimulation protein, SfsA Msm_1091 1043388 - 1041856 - | YjeF-like protein family sugar kinase TERM 705 1043228 - 1043253 + g 77 -7.7 -4.13728 | CCATTTCCTCCCGAT CCTGTGAAAAT AATT ATTTTAACAGG TTTTGAAAATGTATA TERM 706 1043675 - 1043644 - R 70 -7.4 -3.37755 | overlap 1043634 1043642 1043646 ACATATCTGCAAACA CAGAGCATGCAATA ACAC CATTACATGCTCCA AAATATCTTATATCT TERM 707 1043673 - 1043646 - R 81 -10 -3.25472 | overlap 1043634 1043644 1043642 ATATCTGCAAACACA GAGCATGCAATA ACAC CATTACATGCTC CAAAATATCTTATAT Msm_1092 1044711 - 1043821 - | tetrahydromethanopterin formyltransferase TERM 708 1044261 - 1044251 - G 71 -5.4 -4.54727 | overlap 1044256 GCTTTGAAACCAAAA GTAG ATT CTAC TAAGAAATCACCAGA TERM 709 1044561 - 1044548 - G 70 -8.1 -3.1577 | overlap 1044546 ACGTAACAGTCAATA CCTGC TTCT GCAGG ACATCCAATAACAGA Msm_1093 1046028 - 1044811 - | putative transposase TERM 710 1045281 - 1045293 + g 80 -7.7 -4.26188 | overlap 1045269 ATTTATCGATGGCTT CACGA TAT TCGTG TTTTAAGTCTGTGCC TERM 711 1045600 - 1045622 + g 100 -13.6 -3.86684 | opp_overlap 1045594 TAAATCAAATCGTAT TTTATGGAGC CCT GCTCCATAAA TTTGATATAAATTCT TERM 712 1045986 - 1046007 + g 71 -3 -5.14626 | overlap 1045987 1046002 GTTTAAATTGTTTTG ACTCCATA AATTCA TATGGAGC TTTTATTTTGATACT Msm_1094 1047214 - 1046162 - | hypothetical protein Msm_1095 1047297 - 1048733 + | Trk-type potassium transport system, membrane component, TrkH TERM 713 1049184 - 1049174 - g 74 -5.4 -4.84359 | GGACTTTTAGAAAAA CTTG TAA CAAG ACCTAATGTTGCAGA Msm_1096 1048790 - 1049440 + | Trk-type potassium transport system, NAD-binding component, TrkA Msm_1097 1050050 - 1049442 - | Zn-dependent hydrolase Msm_1098 1050718 - 1050311 - | holliday junction resolvase TERM 714 1051393 - 1051375 - H 74 -9 -2.85231 | opp_overlap 1051379 1051389, overlap 1051374 1051379 1051387 AAATAAAATTAGAAG CAAACTAT AAT ATAGTTTG GATAAACTAATATAT Msm_1099 1051448 - 1052437 + | hypothetical protein Msm_1100 1052766 - 1052434 - | hypothetical protein gatB 1052868 - 1054220 + | aspartyl/glutamyl-tRNA amidotransferase subunit B Msm_1102 1054236 - 1055036 + | IMP dehydrogenase related protein Msm_1103 1055037 - 1055327 + | phosphoribosyl-ATP pyrophosphohydrolase, HisE Msm_1104 1055899 - 1055330 - | acetyltransferase Msm_1105 1056662 - 1055901 - | NCAIR mutase related protein, PurE Msm_1106 1056712 - 1058964 + | hydrogenase maturation factor, HypF Msm_1107 1059587 - 1059003 - | transcriptional regulator Msm_1108 1059828 - 1060385 + | molecular chaperone GrpE Msm_1109 1060431 - 1062311 + | molecular chaperone DnaK Msm_1110 1062456 - 1063604 + | molecular chaperone DnaJ TERM 715 1063812 - 1063788 - T 82 -2.9 -6.12458 | opp_overlap 1063792, overlap 1063789 1063792 TAAAAAAAGAAAAAA GTAAGAGAATT ATG AATTCTCTTTA AGGACTGATTTTTAT TERM 716 1063811 - 1063789 - T 73 -6.4 -4.21984 | opp_overlap 1063792, overlap 1063788 1063792 AAAAAAAGAAAAAAG TAAGAGAATT ATG AATTCTCTTT AAGGACTGATTTTTA TERM 717 1063808 - 1063792 - T 77 -8.1 -4.09805 | opp_overlap 1063792, overlap 1063789 1063788 AAAAGAAAAAAGTAA GAGAATT ATG AATTCTC TTTAAGGACTGATTT TERM 718 1063792 - 1063808 + T 72 -8.1 -3.56836 | opp_overlap 1063789 1063788 1063792 AAAAGAAAAAAGTAA GAGAATT ATG AATTCTC TTTAAGGACTGATTT Msm_1111 1069635 - 1063810 - | adhesin-like protein TERM 719 1064021 - 1064006 - G 74 -7.6 -3.84451 | CCGTCTAAAGTTAAA GCAGTA AAGT TACTGC CGTCTAAATGTTTCA TERM 720 1069794 - 1069770 - R 85 -2.9 -6.47325 | opp_overlap 1069774, overlap 1069771 1069774 AAAAAAGAAAAAAAA GTAAGAGAATT ATG AATTCTCTTTA AGGACTTATTTTTAT TERM 721 1069793 - 1069771 - R 76 -6.4 -4.40159 | opp_overlap 1069774, overlap 1069770 1069774 AAAAAGAAAAAAAAG TAAGAGAATT ATG AATTCTCTTT AAGGACTTATTTTTA TERM 722 1069790 - 1069774 - R 79 -8.1 -4.18638 | opp_overlap 1069774, overlap 1069771 1069770 AAGAAAAAAAAGTAA GAGAATT ATG AATTCTC TTTAAGGACTTATTT TERM 723 1069774 - 1069790 + r 74 -8.1 -3.59649 | opp_overlap 1069771 1069770 1069774 AAGAAAAAAAAGTAA GAGAATT ATG AATTCTC TTTAAGGACTTATTT Msm_1112 1075521 - 1069792 - | adhesin-like protein TERM 724 1074513 - 1074503 - G 70 -4 -5.12617 | opp_overlap 1074503 GAATTATTTAAAAAA GTAA TAA TTAC ATTCATACTTCCACC TERM 725 1074714 - 1074692 - G 77 -10 -2.72991 | opp_overlap 1074691, overlap 1074682 1074697 TTATATCCGGAATTA GCATATAATG CAG CATCATATGC ATTACCTGAAGTGGA TERM 726 1075667 - 1075639 - R 73 -4.7 -5.25154 | opp_overlap 1075645, overlap 1075640 AAAAAAATAATAAAA TGTGAATAAATTA TTA TAATTTGTTCACT AAAATAGTATTAGAA TERM 727 1075666 - 1075640 - R 74 -8.2 -3.69602 | opp_overlap 1075645, overlap 1075639 AAAAAATAATAAAAT GTGAATAAATTA TTA TAATTTGTTCAC TAAAATAGTATTAGA Msm_1113 1081957 - 1075652 - | adhesin-like protein TERM 728 1075933 - 1075905 - G 71 -7.5 -3.56092 | overlap 1075893 1075908 TCACTACCTTCCAAA GTAGGTAAAACAG TTA CTTTTTTACCAAC TTGAAGACCGTCAGG TERM 729 1082089 - 1082070 - R 76 -4.4 -5.4111 | overlap 1082071 AAGAAGTATAAAAAA CTTTCTAA AATA TTAGAAAA AAGAAAAAAAGAAGG Msm_1114 1087749 - 1082110 - | adhesin-like protein TERM 730 1088125 - 1088104 - g 71 -3 -5.14626 | overlap 1088065 1088105 AGTATCAAAATAAAA GCTCCATA TGAATT TATGGAGT CAAAACAATTTAAAC TERM 731 1088511 - 1088489 - g 100 -13.6 -3.86684 | opp_overlap 1088484 AGAATTTATATCAAA TTTATGGAGC AGG GCTCCATAAA ATACGATTTGATTTA TERM 732 1088830 - 1088818 - g 80 -7.7 -4.26188 | overlap 1088824 GGCACAGACTTAAAA CACGA ATA TCGTG AAGCCATCGATAAAT Msm_1115 1088083 - 1089300 + | putative transposase TERM 733 1089380 - 1089354 - T 100 -6.8 -6.12458 | opp_overlap 1089355 1089358, overlap 1089355 CAAAAAAAGAAAAAA GTAAGTAAATAA AAG TTATTTACTTAT TGTCTAATAGTAATA TERM 734 1089379 - 1089355 - T 89 -10.3 -4.21984 | opp_overlap 1089355 1089358, overlap 1089354 AAAAAAAGAAAAAAG TAAGTAAATAA AAG TTATTTACTTA TTGTCTAATAGTAAT TERM 735 1089355 - 1089379 + T 82 -10.3 -3.56541 | opp_overlap 1089354 1089355, overlap 1089358 AAAAAAAGAAAAAAG TAAGTAAATAA AAG TTATTTACTTA TTGTCTAATAGTAAT TERM 736 1089358 - 1089376 + T 73 -7.6 -3.91332 | opp_overlap 1089355 1089354, overlap 1089355 AAAAGAAAAAAGTAA GTAAATAA AAG TTATTTAC TTATTGTCTAATAGT Msm_1116 1093852 - 1089377 - | adhesin-like protein TERM 737 1091107 - 1091091 - G 70 -8.1 -3.0497 | overlap 1091093 ATAGTATTGTTAACA GATTTAG TAT CTAAATC TACAGGATAACCTAC TERM 738 1091319 - 1091343 + g 73 -4.3 -5.00467 | opp_overlap 1091311, overlap 1091320 TAAACCATATTTCCA GTTCCAGAAAT AAT ATTTCCGGAAA TTTTATTGTTGTTGG TERM 739 1091320 - 1091342 + g 73 -7.8 -3.58654 | opp_overlap 1091311, overlap 1091319 AAACCATATTTCCAG TTCCAGAAAT AAT ATTTCCGGAA ATTTTATTGTTGTTG TERM 740 1093532 - 1093546 + g 77 -4.4 -5.28176 | opp_overlap 1093543 TACAACATTTAAAGG TTTATT TAA AATAAA TTTTTTATCACTGAA TERM 741 1094014 - 1093988 - R 74 -6.1 -4.3778 | gap 1, opp_overlap 1093988 1093986 1093995 AAAAAAGAAATTAAA TGAAGAATGATT TAAT AATCAT-CTTCA TCGTTTTCGTGTTTG Msm_1117 1098777 - 1093999 - | cobalamin biosynthesis protein N, CobN TERM 742 1097172 - 1097186 + g 72 -2.8 -5.38047 | overlap 1097174 AATCTGCCCATCCAG TAGTCA TTT TGACCA TTTTTTCTATACCTG TERM 743 1099056 - 1099038 - R 71 -3.2 -5.54264 | AAATAGCTAAAAAAA GATTAAAT CAA ATTTCATC CAAATAAAAAAAACT TERM 744 1099566 - 1099542 - R 79 -5.1 -5.35224 | opp_overlap 1099548, overlap 1099543 1099546 TCTATAAAAATAAAA TGAAGATAATT ATT AATTATCCTCT AAACTTTTAATTCTT TERM 745 1099565 - 1099543 - R 79 -8.6 -3.79508 | opp_overlap 1099548, overlap 1099542 1099546 CTATAAAAATAAAAT GAAGATAATT ATT AATTATCCTC TAAACTTTTAATTCT TERM 746 1099562 - 1099546 - R 71 -6.7 -3.96867 | opp_overlap 1099548, overlap 1099543 1099542 TAAAAATAAAATGAA GATAATT ATT AATTATC CTCTAAACTTTTAAT Msm_1118 1100078 - 1099554 - | hypothetical protein TERM 747 1099624 - 1099654 + g 91 -7.8 -5.28778 | opp_overlap 1099624 GTCTCTTTTTGGAAA GCTTTAGAAGATTT TTT GAATTTTTTAAAGC TTTTTTCTAAATCAT Msm_1119 1100489 - 1100088 - | hypothetical protein Msm_1120 1100578 - 1101498 + | methionine aminopeptidase TERM 748 1101492 - 1101475 - T 74 -6.3 -4.40963 | opp_overlap 1101475, overlap 1101472 ATTGTTGAAAAAGAA GGCTGTA CAGT TACAACC TTATAAAAAAAATAA Msm_1121 1102381 - 1101524 - | coenzyme F420-reducing hydrogenase subunit beta TERM 749 1102347 - 1102357 + g 71 -6.8 -4.09117 | TTATCAGTGGATCTA GCTG CTA CAGC TTCTTTGTAAGTACC Msm_1122 1103224 - 1102394 - | coenzyme F420-reducing hydrogenase, gamma subunit, FrhG Msm_1123 1103697 - 1103224 - | coenzyme F420-reducing hydrogenase, delta subunit, FrhD Msm_1124 1104934 - 1103717 - | coenzyme F420-reducing hydrogenase, alpha subunit, FrhA TERM 750 1104972 - 1104962 - H 78 -4 -5.75342 | TCTTTTCAAAAAAAA TTAG AAA CTAA CATTTAATATTTATA TERM 751 1105154 - 1105136 - H 100 -9 -5.44721 | opp_overlap 1105136 ATTATTGTAAAAAAA TAGTACAT ACA ATGTACTA TTAATCAAAATTTAA TERM 752 1105136 - 1105154 + H 75 -9 -3.17714 | opp_overlap 1105136 ATTATTGTAAAAAAA TAGTACAT ACA ATGTACTA TTAATCAAAATTTAA Msm_1125 1105204 - 1105767 + | endoglucanase (CobN-related) TERM 753 1106154 - 1106142 - f 81 -6.3 -4.96028 | CTTTAAAAAAAATAA CTTTG AGA CAAAG AAAAACTTTATATAT Msm_1126 1106192 - 1106548 + | ArsR family transcriptional regulator TERM 754 1106601 - 1106577 - g 87 -10.1 -3.85879 | opp_overlap 1106576 1106579, overlap 1106598 GACAATTTAGAAGAA CATCATCATCA CCA TGATGAAGATG ATTGCTGCGGACACA TERM 755 1106664 - 1106643 - g 71 -8.1 -3.24902 | opp_overlap 1106644, overlap 1106645 GAACACCACCATGAA CATCACCAT CACG ATGATGATG ACTGCTGTGGACATG TERM 756 1106665 - 1106645 - g 77 -9.1 -3.1829 | opp_overlap 1106644, overlap 1106643 ACACCACCATGAACA TCACCATCA CGA TGATGATGA CTGCTGTGGACATGA TERM 757 1107700 - 1107684 - g 71 -6.7 -4.12296 | GCCAGAATTAAAGAA GTTTTAT TTG ATAAAAC AGGTACTTTAACTGA Msm_1127 1106532 - 1108577 + | cation transporter HAD ATPase Msm_1128 1108736 - 1109170 + | hypothetical protein Msm_1129 1110365 - 1109178 - | hypothetical protein Msm_1130 1110981 - 1110382 - | hypothetical protein TERM 758 1111061 - 1111039 - R 78 -2.1 -6.11019 | opp_overlap 1111040 1111042, overlap 1111040 AAAAAGTAAAAAAAA TGATATATT TATCC AATATATCT TAAATCATCACTACT Msm_1131 1111817 - 1111047 - | hypothetical protein Msm_1132 1111994 - 1111818 - | ribosome biogenesis protein Nop10 Msm_1133 1112798 - 1112001 - | translation initiation factor IF-2 subunit alpha TERM 759 1112507 - 1112518 + g 87 -4.4 -5.73672 | CTTTTTGTTCAATTT TCCA ATGC TGGA TTTTTTTAGTTCTTT rps27e 1113056 - 1112877 - | 30S ribosomal protein S27e rpl44e 1113345 - 1113067 - | 50S ribosomal protein L44e TERM 760 1113134 - 1113156 + g 72 -3.6 -5.13521 | GATTTTCCACATTCT TTACATTTAA GTC TTAAATCTAA TTTTTTAACTGGTTT Msm_1136 1114421 - 1113576 - | hypothetical protein Msm_1137 1115215 - 1114481 - | DNA polymerase sliding clamp subunit Msm_1138 1116074 - 1115343 - | glutamine amidotransferase Msm_1139 1117420 - 1116071 - | peptide ligase Msm_1140 1118189 - 1118959 + | hypothetical protein TERM 761 1119157 - 1119173 + T 81 -8.1 -4.46757 | opp_overlap 1119156 1119152 1119157 GATTATGAAATGAAT CCAAATA TAA TATTTGG TTTTATAACTATCTT Msm_1141 1120252 - 1119479 - | tryptophan synthase, alpha subunit, TrpA Msm_1142 1121444 - 1120245 - | tryptophan synthase subunit beta TERM 762 1120642 - 1120655 + g 74 -6.7 -4.33105 | opp_overlap 1120642 GCTGCTGCATTATAA GGAGT ATCT ACTCC TTTTCCTCCTGCTTC Msm_1143 1122795 - 1122019 - | indole-3-glycerol phosphate synthase, TrpC Msm_1144 1123807 - 1122800 - | anthranilate phosphoribosyltransferase, TrpD Msm_1145 1124389 - 1123808 - | anthranilate/para-aminobenzoate synthase component II, TrpG Msm_1146 1125894 - 1124386 - | anthranilate/para-aminobenzoate synthase component I, TrpE Msm_1147 1126379 - 1125981 - | hypothetical protein Msm_1148 1127172 - 1126426 - | metal-dependent membrane protease TERM 763 1127216 - 1127199 - R 81 -4.1 -6.09196 | opp_overlap 1127201, overlap 1127201 CCTAAAATAAAAAAA GAGGTGA AAAA TCACCTA ATATTATAAAGTAAA TERM 764 1127214 - 1127201 - R 77 -6.7 -4.67109 | opp_overlap 1127201, overlap 1127199 TAAAATAAAAAAAGA GGTGA AAAA TCACC TAATATTATAAAGTA Msm_1149 1127938 - 1127210 - | hypothetical protein TERM 765 1127963 - 1127983 + r 74 -7 -4.06148 | opp_overlap 1127960 1127962 1127959 ACCATCATCAATGAT GAAAACAT CCTCA ATGTTTTC TTTATCTAAAATCTT Msm_1150 1128145 - 1127942 - | transcriptional regulator Msm_1151 1128319 - 1129671 + | adenylosuccinate lyase Msm_1152 1129705 - 1130556 + | hypothetical protein TERM 766 1130541 - 1130566 + T 82 -4.9 -5.63012 | opp_overlap 1130539 1130541 AAAATTAAAAATAGA GTTAATTGA CAATTAAA TCAATTAAC TTTTTGTTTCTTTTT Msm_1153 1133009 - 1130562 - | cation transporter HAD ATPase TERM 767 1130800 - 1130790 - G 78 -6.8 -4.3739 | TACCTTTTTAGAAAA CTGC ACA GCAG CAACTACATTTTCCA TERM 768 1131038 - 1131049 + g 81 -2.2 -5.9218 | CTACTGCACTGGCTA CAGT TGAT GCTG TTTTTTTGTTATCTC TERM 769 1131793 - 1131772 - G 70 -7.4 -3.72695 | opp_overlap 1131771 1131772 ATTGTGGGTATGAAA TAGCTAAC TGCAGT GTTAGCTA ATTTTTGAACCGGAG Msm_1154 1134355 - 1133132 - | metal-dependent amidohydrolase Msm_1155 1134759 - 1134370 - | hypothetical protein Msm_1156 1136199 - 1134937 - | tRNA pseudouridine synthase D, TruD Msm_1157 1136812 - 1136381 - | hypothetical protein Msm_1158 1138228 - 1136864 - | hydrogenase expression/formation protein, HypE hisH 1138840 - 1138244 - | imidazole glycerol phosphate synthase subunit HisH Msm_1160 1139912 - 1138845 - | nitrogenase molybdenum-iron protein, NifD TERM 770 1139958 - 1139976 + H 78 -7.6 -4.33274 | opp_overlap 1139950 1139972, overlap 1139972 ATAATATTAAATTTT CTTAATTT ATA AAATTAAG TTTTAATAGTATAAA TERM 771 1140693 - 1140663 - g 70 -6.3 -4.2679 | CAACTTTGAGGAAAA CATAACTTCAGAT CCGTC ATCTGAAAATATG ACTGCTCCGGAAGAG Msm_1161 1140043 - 1141011 + | hypothetical protein TERM 772 1141410 - 1141392 - g 73 -4.6 -5.11033 | opp_overlap 1141392 CATAATTTCAAAAAA TGGAGA AGACAAA TCTCCA TGTGTTGACTGCTGT Msm_1162 1141069 - 1141467 + | hypothetical protein Msm_1163 1141551 - 1141727 + | hypothetical protein Msm_1164 1142926 - 1141736 - | translation-associated GTPase Msm_1165 1143011 - 1143898 + | phosphohydrolase (metal-dependent) Msm_1166 1143905 - 1146046 + | hypothetical protein TERM 773 1146355 - 1146341 - g 79 -3.6 -5.64006 | AGCTAATGAAAAAAA TTTTCC TGA AGAAAA AATAGAAGTTATTCC Msm_1167 1146048 - 1146686 + | cobalt-precorrin-6Y C(5)-methyltransferase TERM 774 1146820 - 1146853 + G 79 -4.9 -5.23943 | gap 1, opp_overlap 1146828 GGTAGATACTATGAT TAGAAAAAT-AAACTT AAT AAGTTTCATTTTCCTA TTTATTTTTTTGATA TERM 775 1148724 - 1148703 - g 76 -3.7 -5.38047 | CAGCTAGAGAAAAAA TCATCGGAT ACAT AACCAATGA AAAAATCAACACTAT Msm_1168 1146815 - 1149982 + | putative adhesin-like protein Msm_1169 1149994 - 1150212 + | hypothetical protein TERM 776 1150220 - 1150210 - T 72 -2.6 -5.75822 | opp_overlap 1150217, overlap 1150217 TATAAATTAAAAAAA TAAA AAA TTTA AGTTAAAATGTTATA TERM 777 1150227 - 1150217 - T 79 -2.6 -6.12458 | opp_overlap 1150217 1150222 1150224, overlap 1150210 1150222 TAAAAAAATAAAAAA TTTA AGT TAAA ATGTTATATTTTAAC TERM 778 1150222 - 1150242 + T 95 -6.3 -5.63012 | opp_overlap 1150217 1150222, overlap 1150217 1150224 AAATAAAAAATTTAA GTTAAAATG TTA TATTTTAAC TTTTTATTTCTTTTT Msm_1170 1151280 - 1150258 - | arsenite-transporting ATPase TERM 779 1151282 - 1151320 + H 90 -7.8 -5.24989 | opp_overlap 1151290 1151294 1151304 AAAATTACCTCCATA TTAAAAAATTAATTTTAG TAA CTAAAAGTAATTTTATAA TTTTTTCCTATATAA TERM 780 1151312 - 1151290 - H 76 -5 -5.21709 | opp_overlap 1151282, overlap 1151294 1151304 CTCCATATTAAAAAA TTAATTTTAG TAA CTAAAAGTAA TTTTATAATTTTTTC TERM 781 1152115 - 1152088 - g 70 -7.2 -3.72407 | opp_overlap 1152087 1152088 1152111 1152113, overlap 1152079 1152111 AGAAACTTCAAAAGA TGAAATAGCTAA AAAC TTAGATATTTCA ATTGATGAAATTGAT Msm_1171 1151411 - 1152211 + | ammonia-dependent NAD+ synthetase, NadE TERM 782 1152437 - 1152448 + G 70 -7.2 -3.65522 | opp_overlap 1152437 TGGCATGGCATGTAA CCGG AGCT CCGG TTATTGGAATAGCTG TERM 783 1154207 - 1154197 - g 71 -5.4 -4.58943 | TGGAGAGAAAAAGAA GTTC TTG GAAC CAAAAGAAGATTGGA TERM 784 1154872 - 1154858 - g 77 -4.3 -5.1471 | ATGATAAAAAAGAAA TAGCT GCAGT AGCTA AAAAAATAGGTCGTG leuS 1152211 - 1155066 + | leucyl-tRNA synthetase TERM 785 1155059 - 1155085 + T 86 -9.6 -4.29369 | opp_overlap 1155064 AACCAGCTATTTTTA TGGAATAGGGTT AAA AACCTTATTTCA TTTACTTATTTTTTA TERM 786 1155777 - 1155737 - T 70 -7 -3.58269 | gap 1, opp_overlap 1155747, overlap 1155744 1155746 TAATTTACGGGCAAA GACTAAATACCCAGTATGA CCAA CCATAC-GGGTTTTTGGTC TGACTCCCTGAGGTC Msm_1173 1156444 - 1155719 - | tRNA(1-methyladenosine) methyltransferase TERM 787 1155747 - 1155768 + g 70 -4.4 -4.81551 | opp_overlap 1155746 1155744 1155737 GCAAAGACTAAATAC CCAGTATG ACCAAC CATACGGG TTTTTGGTCTGACTC Msm_1174 1157419 - 1156460 - | heat shock protein HtpX (Zn-dependent) Msm_1175 1157852 - 1157475 - | hypothetical protein rfc 1157968 - 1158915 + | replication factor C small subunit Msm_1177 1158925 - 1160403 + | replication factor C large subunit Msm_1178 1161072 - 1160389 - | putative ATPase implicated in cell cycle control Msm_1179 1161927 - 1161082 - | shikimate 5-dehydrogenase, AroE TERM 788 1162711 - 1162677 - g 76 -8.8 -3.54436 | opp_overlap 1162677 1162680, overlap 1162666 1162664 1162680 CACATATTGACACAA TAATGTTAGAATTTCC TTG GATAATTCCAACATTA ATTATATGTTTAATA Msm_1180 1161983 - 1162789 + | metal-dependent membrane protease hisS 1162908 - 1164203 + | histidyl-tRNA synthetase hisI 1164207 - 1164605 + | phosphoribosyl-AMP cyclohydrolase Msm_1183 1164607 - 1166457 + | ATPase Msm_1184 1166467 - 1167213 + | sugar phosphate isomerase/epimerase Msm_1185 1167705 - 1167196 - | methylated-DNA-[protein]-cysteine S-methyltransferase Msm_1186 1167835 - 1168968 + | potassium transport system, membrane component, KefB Msm_1187 1171310 - 1168992 - | Hef nuclease TERM 789 1170479 - 1170489 + g 71 -5.4 -4.70879 | opp_overlap 1170487, overlap 1170487 AAATAGAAATAGCTT GGAA ACA TTCC TTTTTAGGATTTACA TERM 790 1171448 - 1171425 - R 72 -2.5 -5.86609 | opp_overlap 1171428 1171442 1171444, overlap 1171428 1171442 1171444 TTAAAAAAAGAAAAA GAAGAGATT AATTAA AATCTCTTA AATTAAGATATTATT Msm_1188 1185526 - 1171451 - | adhesin-like protein TERM 791 1173934 - 1173944 + g 71 -5.4 -4.67234 | opp_overlap 1173934 TACCATTAACAATAG CTAC AAT GTAG TTTTTACCATTAACT TERM 792 1184875 - 1184894 + g 75 -8 -3.65699 | opp_overlap 1184875 1184878, overlap 1184871 1184878 CATTATTGTCACGAA TAACCATA TTTT TATGGTTA TTGATTATTTGTGAA TERM 793 1184894 - 1184875 - G 70 -8 -3.15861 | opp_overlap 1184875 1184871 1184878, overlap 1184878 CATTATTGTCACGAA TAACCATA TTTT TATGGTTA TTGATTATTTGTGAA Msm_1189 1186789 - 1185584 - | putative transposase TERM 794 1186943 - 1186918 - R 70 -4.1 -5.14819 | AAATTAAAAAACAAA TAAGCCTATAA AATT TTACAGACTCA ATTTAAATAAATAAT Msm_1190 1188851 - 1187316 - | UDP-N-acetylmuramate-alanine ligase TERM 795 1188493 - 1188512 + g 74 -5.8 -4.62772 | gap 1 GTCTTACCATTAGTT CCGGTTATT CCA AATA-CCGG TTTATTTACTTTAAA Msm_1191 1190226 - 1188844 - | peptide ligase Msm_1192 1191657 - 1190461 - | hypothetical protein Msm_1193 1192984 - 1191650 - | single-stranded DNA-specific exonuclease rps15p 1193372 - 1192974 - | 30S ribosomal protein S15P Msm_1195 1193977 - 1193429 - | xanthosine triphosphate pyrophosphatase TERM 796 1194346 - 1194298 - H 86 -10.8 -3.52678 | opp_overlap 1194305 1194314 1194338, overlap 1194305 1194314 AATTCTTGAGAAACA TAAGAAACATAAGAAACATAAA TTTTT TTTATGTTTTTTATGTTTTTTA ATAAAACACATATCA TERM 797 1194339 - 1194305 - H 87 -8.9 -4.54553 | opp_overlap 1194305 1194314 1194338, overlap 1194298 1194314 GAGAAACATAAGAAA CATAAGAAACATAAA TTTTT TTTATGTTTTTTATG TTTTTTAATAAAACA TERM 798 1194305 - 1194339 + H 100 -11.1 -5.14563 | opp_overlap 1194305 1194298 1194314, overlap 1194314 1194338 GAGAAACATAAGAAA CATAAGAAACATAAA TTTTT TTTATGTTTTTTATG TTTTTTAATAAAACA TERM 799 1194314 - 1194330 + H 76 -3.8 -5.72118 | opp_overlap 1194314 1194305 1194298, overlap 1194305 AAGAAACATAAGAAA CATAAA TTTTT TTTATG TTTTTTATGTTTTTT TERM 800 1194616 - 1194672 + H 85 -11.4 -2.50074 | opp_overlap 1194618, overlap 1194627 1194636 TTAAATATTCTGAAA AACATAAGAAACATAAGAAACATAAA TTTTT TTTATGTTTTTTATGTTTTTTATGAA ATGTATTATCAGAGG TERM 801 1194670 - 1194618 - H 100 -14 -4.62904 | opp_overlap 1194616 1194627 1194636 AAATATTCTGAAAAA CATAAGAAACATAAGAAACATAAA TTTTT TTTATGTTTTTTATGTTTTTTATG AAATGTATTATCAGA TERM 802 1194627 - 1194661 + H 100 -11.1 -5.26918 | opp_overlap 1194618, overlap 1194616 1194636 GAAAAACATAAGAAA CATAAGAAACATAAA TTTTT TTTATGTTTTTTATG TTTTTTATGAAATGT TERM 803 1194636 - 1194652 + H 76 -3.8 -5.72118 | opp_overlap 1194618, overlap 1194627 1194616 AAGAAACATAAGAAA CATAAA TTTTT TTTATG TTTTTTATGTTTTTT TERM 804 1195804 - 1195785 - g 78 -6.6 -4.35646 | opp_overlap 1195785 1195784, overlap 1195774 AGAGGCAAATACAAA TTAAAAAG TAAT CTTTTTAA ATTATACCTGCAAAA Msm_1196 1194696 - 1195856 + | ATPase Msm_1197 1196162 - 1197436 + | ATPase TERM 805 1197623 - 1197591 - T 91 -12.1 -3.40899 | opp_overlap 1197591 AATTTTGTATCATAA GTTCTGGTGCTTAAA ATC TATAAGCACCGGAAC TTTTTTATAAGTTTT TERM 806 1197591 - 1197623 + T 100 -14.3 -5.35222 | opp_overlap 1197591 AATTTTGTATCATAA GTTCTGGTGCTTAAA ATC TATAAGCACCGGAAC TTTTTTATAAGTTTT TERM 807 1197731 - 1197719 - T 71 -5.5 -4.61353 | opp_overlap 1197719, overlap 1197716 CATATATAAAAATAA GGTCG GCA CAACC TGTACTTTTCTAATG Msm_1198 1199357 - 1197741 - | O-sialoglycoprotein endopeptidase/protein kinase Msm_1199 1199502 - 1199963 + | hypothetical protein Msm_1200 1199960 - 1201027 + | hypothetical protein TERM 808 1201056 - 1201041 - T 78 -7.6 -4.33819 | opp_overlap 1201032 AGTATTTAGAATAAA TGGGTT ATTG AACCCA TAAATACTATTATTC Msm_1201 1201864 - 1201031 - | undecaprenyl-diphosphatase, UppP TERM 809 1201508 - 1201484 - G 82 -4.9 -5.42164 | TACAAATAAGAAAAA TGCCGGAACAT ATA ATGCACCTGCA AACAATGACTCTACC Msm_1202 1202800 - 1201877 - | branched-chain-amino-acid aminotransferase, IlvE Msm_1203 1202956 - 1204098 + | zinc-dependent protease TERM 810 1204199 - 1204183 - f 72 -8.7 -2.79183 | opp_overlap 1204174 TCTAGTGGTATGATA CCTCCCT TAC AAGGAGG GGATCACGAGTTCGA Msm_1204 1204416 - 1205243 + | F420-dependent methylenetetrahydromethanopterin dehydrogenase TERM 811 1205274 - 1205259 - T 84 -7.6 -4.84033 | opp_overlap 1205254 1205259, overlap 1205253 ATATAAAAATTAAAA GTAGCT TTTT AGCTAC TTACATTATCTTTTT Msm_1205 1205952 - 1205317 - | hypothetical protein Msm_1206 1206531 - 1205953 - | imidazoleglycerol-phosphate dehydratase TERM 812 1206228 - 1206206 - G 81 -10 -3.13403 | opp_overlap 1206206, overlap 1206204 1206210 CTGCGCCCACTAATA TCAATAGCTA CTT TAGCTACTGA TTCATCCATAGGTAC TERM 813 1206585 - 1206563 - R 90 -10 -4.55128 | ATTGTTAAATTAAAA GAAGAGTAAA TTA TTCACTCTTC CGGAGCATTACGTAT Msm_1207 1207486 - 1206794 - | molybdate transport system regulatory protein Msm_1208 1209373 - 1207817 - | teichoic acid transporter TERM 814 1208905 - 1208923 + g 72 -9 -2.59876 | opp_overlap 1208904, overlap 1208904 1208907 ACTGCTCTACAGCAC GAGTATAT ACA ATATACTC CATTTTATATACTCC Msm_1209 1210052 - 1209465 - | multimeric flavodoxin TERM 815 1210376 - 1210366 - g 72 -2.6 -5.42198 | opp_overlap 1210375 TCGGAAAAAAGAAAA TATT TTT AATA GGTGCACTAATTTAC Msm_1210 1210221 - 1211675 + | efflux pump antibiotic resistance protein TERM 816 1211757 - 1211744 - g 77 -3.9 -5.40072 | GGTGTTGTAAAAAAA TATTC TAGA GAATA CAATAGAACTCTTAA Msm_1211 1211714 - 1212499 + | putative phosphoserine phosphatase Msm_1212 1212774 - 1212496 - | hypothetical protein TERM 817 1212835 - 1212804 - R 71 -5.4 -4.69028 | opp_overlap 1212806 1212807 1212811, overlap 1212807 1212811 TTTTAAAAAAAAATA GAATAAATTAAATC AAAA GATTTAATTTACTT GTTCGTCTTCATCAA TERM 818 1212807 - 1212832 + r 74 -9.3 -2.8917 | opp_overlap 1212807 1212804 1212811, overlap 1212806 1212811 TAAAAAAAAATAGAA TAAATTAAATC AAAA GATTTAATTTA CTTGTTCGTCTTCAT TERM 819 1212832 - 1212807 - R 86 -9.3 -4.40373 | opp_overlap 1212806 1212807 1212811, overlap 1212804 1212811 TAAAAAAAAATAGAA TAAATTAAATC AAAA GATTTAATTTA CTTGTTCGTCTTCAT TERM 820 1212828 - 1212811 - R 71 -5.7 -4.62712 | opp_overlap 1212807 1212806 1212811, overlap 1212807 1212804 AAAAAATAGAATAAA TTAAATC AAAA GATTTAA TTTACTTGTTCGTCT Msm_1213 1214051 - 1212825 - | bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase TERM 821 1214067 - 1214092 + r 71 -2.9 -5.64006 | gap 1, opp_overlap 1214074, overlap 1214071 TAAATAGTTCCTCCG TAT-ATTATATA CAA TATATAATTATA TTTTTTTAATTAAAT TERM 822 1214385 - 1214354 - R 79 -8.2 -4.1711 | opp_overlap 1214354 1214356 1214358 ATCACCTTGAATAAA TAGATATGTGGA TTTATCCC CCCACATATCTA TAATTCTCATAAAAA Msm_1214 1216410 - 1214584 - | threonyl-tRNA synthetase Msm_1215 1216512 - 1217867 + | cobyrinic acid a,c-diamide synthase, CbiA TERM 823 1217903 - 1217930 + G 79 -3.6 -5.64274 | gap 1 TTTGACTTTTTTTCA CCATATATTGTAG CAA TTGCAATA-ATGG TTTTTTTATCAATGG TERM 824 1218817 - 1218836 + G 76 -9.4 -3.08508 | opp_overlap 1218817 1218816 1218815 ATATAAAAAAGAAGT TGGAATAG GAAT CTATTCCA TAATTTTAACACATA TERM 825 1218836 - 1218817 - g 74 -9.4 -2.65161 | opp_overlap 1218817, overlap 1218816 1218815 ATATAAAAAAGAAGT TGGAATAG GAAT CTATTCCA TAATTTTAACACATA Msm_1216 1217873 - 1218970 + | hypothetical protein Msm_1217 1219859 - 1218951 - | type II restriction endonuclease TERM 826 1219544 - 1219560 + g 74 -3.8 -5.24129 | CAACTAAATCATCCC TATCAA CAAGC TTGATA TTTTTTCTAAGAGCA Msm_1218 1219982 - 1220758 + | acid phosphatase SurE Msm_1219 1220903 - 1220760 - | hypothetical protein TERM 827 1221009 - 1220999 - H 70 -4 -5.16133 | opp_overlap 1220999 ATTATAATATAAAAA TCAA GGT TTGA TTTAATGAACAACAA Msm_1220 1221014 - 1221211 + | small nucleolar ribonucleoprotein Msm_1221 1222216 - 1221212 - | hypothetical protein TERM 828 1221293 - 1221323 + g 82 -7.8 -4.42748 | overlap 1221261 1221291 1221296 TGCGCCAATAGCTCC GGATTCTTTAGAAA TAA TTTTTAAAGAATAC TTGTTTTTAAAGTAC TERM 829 1221296 - 1221320 + g 70 -8.1 -3.17725 | overlap 1221293 1221291 GCCAATAGCTCCGGA TTCTTTAGAAA TAA TTTTTAAAGAA TACTTGTTTTTAAAG TERM 830 1222268 - 1222290 + r 70 -5 -4.91109 | opp_overlap 1222267 1222270, overlap 1222270 AGAAAAAAGAGAAAT AATGATTAAA TTA TTTAATCATC TTTTTGTAATCCACA TERM 831 1222288 - 1222270 - R 80 -7.6 -4.38412 | opp_overlap 1222268 1222270, overlap 1222267 AAAAAAGAGAAATAA TGATTAAA TTA TTTAATCA TCTTTTTGTAATCCA TERM 832 1222270 - 1222288 + r 76 -7.6 -4.08042 | opp_overlap 1222270 1222267, overlap 1222268 AAAAAAGAGAAATAA TGATTAAA TTA TTTAATCA TCTTTTTGTAATCCA Msm_1222 1223274 - 1222282 - | ketol-acid reductoisomerase TERM 833 1223542 - 1223524 - R 76 -7.6 -3.99228 | overlap 1223513 TAAGTTAAAATACAA CTATATTT TAA AAATATAG ACTGAACTCCATCTA TERM 834 1223863 - 1223851 - R 74 -3.5 -5.64274 | CGATTTATAAAAAAA TAATA AAT TATTA AAATAAGATTAAAAT TERM 835 1223980 - 1224005 + r 78 -9.1 -3.39895 | opp_overlap 1223978 1223977 1223980 1223983, overlap 1223983 AATTATAAGAAAGTA TAAGCAAACCC CTTT GGCTTTGCTTA TTAATTAGTAGCCAA TERM 836 1224005 - 1223980 - R 75 -9.1 -3.16682 | opp_overlap 1223980 1223983, overlap 1223978 1223977 1223983 AATTATAAGAAAGTA TAAGCAAACCC CTTT GGCTTTGCTTA TTAATTAGTAGCCAA TERM 837 1224149 - 1224124 - R 100 -7.7 -5.69068 | TAAAAATAGAAAAAA GTAGACGATAA TTAT CTATCATCTAC TACAACATCTAATTT Msm_1223 1224662 - 1224135 - | carbonic anhydrase Msm_1224 1225150 - 1224659 - | acetolactate synthase, small subunit (regulatory), IlvH Msm_1225 1226851 - 1225160 - | acetolactate synthase catalytic subunit Msm_1226 1227868 - 1226963 - | ornithine carbamoyltransferase Msm_1227 1229404 - 1228094 - | phosphoribosylamine--glycine ligase Msm_1228 1229489 - 1230850 + | Na+-driven multidrug efflux pump TERM 838 1231084 - 1231052 - f 95 -11.5 -3.8613 | overlap 1231070 1231072 TTTAAATACTAACAA TTGCATATGCAAG AGTAATA CTTGCACATGCAA GAATTGAGGTGGAAA Msm_1229 1231079 - 1232470 + | Na+-driven multidrug efflux pump Msm_1230 1232460 - 1232906 + | MarR family transcriptional regulator TERM 839 1232920 - 1232904 - T 79 -5.2 -5.35365 | opp_overlap 1232904 AAAAGAGAAGAAAAA TGAGTT TTTAC AACTCA TTTACATTTTTTGAG argS 1234649 - 1232922 - | arginyl-tRNA synthetase Msm_1232 1235087 - 1234665 - | signal peptidase I TERM 840 1235227 - 1235206 - R 71 -3.8 -5.48163 | AAATAAATTAAAAAA TAATGTCA AATAGA TGACACTA TCCTTTTTTCTTAAA Msm_1233 1236496 - 1235225 - | glutamate-1-semialdehyde aminotransferase cbiC 1237135 - 1236506 - | precorrin-8X methylmutase Msm_1235 1238405 - 1237197 - | flavoprotein TERM 841 1237406 - 1237419 + g 70 -3.9 -5.055 | TATTAAAACCGGAGA TTTCA AATT TGAAA TTTTTTAAAGCTTCA TERM 842 1237765 - 1237780 + g 82 -6.2 -4.94487 | overlap 1237775 CTTATTAAAACATTG CCTTTA ATTT TAAAGG TTTTATATTTTATAA aspC 1239737 - 1238418 - | aspartyl-tRNA synthetase TERM 843 1241275 - 1241262 - g 70 -3.8 -5.02074 | TCAGTTGTTAAAAAA GGTG CAGTTT CACC AGATTTAATGCATCT Msm_1237 1240098 - 1241747 + | dihydroxy-acid dehydratase TERM 844 1242614 - 1242600 - g 79 -2.8 -5.71712 | overlap 1242601 1242607 1242608 TTGTAGATAAAAAAA CTGAAG ATG CTCCAA GAGCTGAAATCATAA hisD 1241753 - 1243027 + | histidinol dehydrogenase TERM 845 1243007 - 1243036 + F 85 -4.4 -5.95286 | opp_overlap 1243011, overlap 1243011 CATGTTGACTCAATC AAAACCAGATTA AATAAA TAGTCTGGTTTA TTTTTTATTTTTCAT TERM 846 1243011 - 1243032 + F 76 -5.2 -5.29208 | opp_overlap 1243011, overlap 1243007 TTGACTCAATCAAAA CCAGATTA AATAAA TAGTCTGG TTTATTTTTTATTTT TERM 847 1244098 - 1244086 - g 72 -4.9 -4.8236 | CAGCTAAAAAAATAA TTTCT ATT AGAAA AAGATATAAGTTTAC Msm_1239 1243098 - 1244216 + | DNA-binding protein Msm_1240 1244936 - 1244199 - | AAA ATPase Msm_1241 1245713 - 1244937 - | chromosome partitioning ATPase TERM 848 1245810 - 1245761 - R 71 -6.8 -4.11585 | opp_overlap 1245768 1245768 1245786 1245804, overlap 1245762 1245804 AGTTATTAGAAATAA GTTTTAAGTTATATCTTACAAG AGATAA CTTCTAAGTTATAACTTAAAAG AAATAACTTTTAACT TERM 849 1245809 - 1245762 - R 80 -10.3 -3.06228 | opp_overlap 1245768 1245768 1245786 1245804, overlap 1245761 1245804 GTTATTAGAAATAAG TTTTAAGTTATATCTTACAAG AGATAA CTTCTAAGTTATAACTTAAAA GAAATAACTTTTAAC TERM 850 1245845 - 1245817 - R 74 -6.2 -4.44301 | opp_overlap 1245804, overlap 1245804 1245835 ACTTAAAAGAAATAA CTTTTAACTTTT AAGAA ATAAGTTAAAAG AGATAACTTATAGGA TERM 851 1245943 - 1245915 - R 74 -6.2 -4.44301 | opp_overlap 1245902, overlap 1245902 1245933 ACTTAAAAGAAATAA CTTTTAACTTTT AAGAA ATAAGTTAAAAG AGATAACTTATAGGA Msm_1242 1247783 - 1246482 - | tryptophan synthase subunit beta Msm_1243 1247874 - 1248908 + | putative actin-like ATPase Msm_1244 1248910 - 1249569 + | metal-dependent phosphoesterase Msm_1245 1249870 - 1249592 - | DNA-binding protein, AlbA TERM 852 1249895 - 1249914 + r 71 -3.7 -5.45726 | opp_overlap 1249892, overlap 1249892 ACTCCATATAGACTG TTATACA GTTAAG TGTATAA TTTTTTTAACATATA Msm_1246 1251478 - 1249943 - | 2-isopropylmalate synthase Msm_1247 1252771 - 1251536 - | serine/threonine protein kinase related protein (PQQ-binding) Msm_1248 1254001 - 1252784 - | multidrug ABC transporter, permease component Msm_1249 1255046 - 1253988 - | multidrug ABC transporter, ATPase component Msm_1250 1255464 - 1255030 - | PadR-like family transcriptional regulator Msm_1251 1255569 - 1256288 + | sugar phosphate isomerase/epimerase Msm_1252 1257063 - 1256269 - | cation transporter HAD ATPase TERM 853 1256646 - 1256657 + g 74 -3 -5.42605 | opp_overlap 1256646 TGCCTGCAGAAGTAA TAGT ATAA ACTA TTTTATTTTTATTAA TERM 854 1257943 - 1257924 - g 70 -7.2 -3.61715 | gap 1 CAGCTCCTGGAAGAA TCC-CTGGA GGA TCCAGTGGA GGAAGTGCTGCTGCA TERM 855 1258575 - 1258565 - g 71 -3.2 -5.28826 | AAATTCTATAAAAAA GCTC TTC AAGC AAGATCCCTTATTAG gatA 1257491 - 1258861 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 856 1258859 - 1258891 + F 86 -5.1 -6.04324 | opp_overlap 1258859 1258858 1258862 TTTGAAAATGAAAAT TAATCCTAATAAATT ATC ATTTTATTAGAATTA TTTTTTCTTTTTTAC Msm_1254 1259284 - 1260804 + | cobyrinic acid a,c-diamide synthase Msm_1255 1260805 - 1261230 + | hypothetical protein Msm_1256 1261911 - 1261231 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB TERM 857 1261308 - 1261322 + g 72 -8.6 -3.06312 | overlap 1261310 CAGCATATTTTTTAG CATCAG CTA CTGATG TTGCCTGACCGGTTT Msm_1257 1262520 - 1262146 - | riboflavin/FAD biosynthetic operon transcriptional regulator TERM 858 1263800 - 1263786 - g 85 -5 -5.54079 | TTAAAAATGAAAAAA TTGAAG TGG CTCCAA CTGCACATCACTTTA sdhA 1262759 - 1264408 + | succinate dehydrogenase flavoprotein subunit TERM 859 1264397 - 1264425 + T 77 -8.4 -3.6707 | gap 1, opp_overlap 1264396, overlap 1264400 1264421 AATAAAATAAAATTT GAAGCTAGATAAA ATTA TTTA-CTAGCTTC TTTAAGCTCTTCAAT Msm_1259 1265718 - 1264411 - | metal-dependent hydrolase Msm_1260 1265969 - 1265760 - | histone TERM 860 1266160 - 1266146 - H 95 -5.8 -6.13503 | TATTAATAAAAAAAA TGATAT ATC ATATCA CATAAATAAAATGAG hisG 1266171 - 1267046 + | ATP phosphoribosyltransferase TERM 861 1267451 - 1267440 - g 83 -4.4 -5.61824 | opp_overlap 1267443, overlap 1267443 TAAAAGCTAAAAAAA CACT TTCC AGTG AAAATATTCCTGTAT Msm_1262 1267043 - 1267534 + | flavodoxin (protoporphyrinogen oxidase) pyrB 1267541 - 1268491 + | aspartate carbamoyltransferase catalytic subunit Msm_1264 1269630 - 1268479 - | cell division control protein 6, Cdc6 TERM 862 1268625 - 1268641 + g 70 -8.1 -3.12923 | opp_overlap 1268624 TAAAATCAAAAATTC TTCTGTA TGT TACAGAA TCTCCTTTTGATACT TERM 863 1270071 - 1270095 + r 70 -4.5 -5.0133 | opp_overlap 1270058 1270057 1270084 1270087, overlap 1270069 1270058 AGTTTAAAACAATTT TTTATAAAATA AAT TATTTTAAAAA TTTTTTAAAAAAATA Msm_1265 1271055 - 1270570 - | hypothetical protein TERM 864 1271346 - 1271336 - g 91 -5.4 -5.83211 | opp_overlap 1271336 TATTAAAATAAAAAA CAGA TGG TCTG GTTTATTTTTAACAT TERM 865 1271420 - 1271430 + G 72 -2.6 -5.48787 | TTATTTATTTTCATT TAAT ATA ATTA TTTTTTATATATTAT Msm_1266 1271118 - 1272161 + | cobalamin biosynthesis protein Msm_1267 1272158 - 1273177 + | cobalamin biosynthesis protein G, CbiG TERM 866 1273198 - 1273184 - T 77 -2.9 -5.9663 | opp_overlap 1273184 AAAGATTAAAAAAAA TTAGA TGGAT TCTAA TTTAGAAAGGACTTC Msm_1268 1273432 - 1273184 - | hypothetical protein TERM 867 1273643 - 1273662 + G 70 -8 -3.10977 | overlap 1273641 AAAAAAATAGCTATT GATAAAGA TACT TCTTTATC TGGTTTAATTTTAGA TERM 868 1273735 - 1273714 - g 100 -10.3 -5.07652 | opp_overlap 1273712 1273714 1273718, overlap 1273730 TTCTGGAAAAGAAAA TGAATCTTC ACAG GAAGATTCA TATTAAATCTTCAGT TERM 869 1273714 - 1273735 + G 83 -10.3 -3.1577 | opp_overlap 1273714 1273730, overlap 1273712 1273718 TTCTGGAAAAGAAAA TGAATCTTC ACAG GAAGATTCA TATTAAATCTTCAGT Msm_1269 1273550 - 1273741 + | putative Met repressor-like protein Msm_1270 1274320 - 1273733 - | fuculose-1-phosphate aldolase Msm_1271 1276088 - 1274373 - | DNA polymerase II small subunit TERM 870 1275156 - 1275167 + g 71 -3 -5.17054 | TAAGAATACAATACT GAAA TCCA TTTC TTTTTTAGGTATTCT TERM 871 1276307 - 1276320 + G 70 -3.9 -5.0538 | TAATACTAGTTGTTG TACTA TTTG TAGTA TTTTTTGAAATAGGA Msm_1272 1276273 - 1276767 + | hypothetical protein Msm_1273 1276777 - 1277853 + | cobalt precorrin-3B C17-methyltransferase, CbiH Msm_1274 1277865 - 1278467 + | potassium ion transport protein TERM 872 1279447 - 1279414 - g 73 -9.1 -2.91383 | gap 1, opp_overlap 1279408 ATCTTCAGGTATACA TTCAGGTCTTAT-AGA ACC TCTTAAAAGACCTGAA GGTGAATCTGTACAT Msm_1275 1278521 - 1279774 + | mgtE-like divalent cation transporter Msm_1276 1280637 - 1279771 - | hypothetical protein TERM 873 1280202 - 1280218 + g 80 -5.9 -5.11613 | overlap 1280203 CACATTTAACCATTC TGTTTAC ACT GTAAACG TTTTTTCCGTCATCT TERM 874 1280203 - 1280217 + g 70 -7.2 -3.65883 | overlap 1280202 ACATTTAACCATTCT GTTTAC ACT GTAAAC GTTTTTTCCGTCATC TERM 875 1280280 - 1280291 + g 70 -4.4 -4.78661 | TCTCTTTAGGGATGA CTTC CATT GAAG TTTTAATTTTTGAAT Msm_1277 1281578 - 1280637 - | hypothetical protein TERM 876 1281033 - 1281043 + g 87 -5.4 -5.67967 | GGTGGTTAAAGTAGT TCCA TAA TGGA TTTTTTTATCGTCAT TERM 877 1281674 - 1281645 - H 76 -6.7 -4.4874 | opp_overlap 1281647 GTGAAAAAGTGAAAA TATGTTTTTTAAT TGGA ATTATAAAACATA TCTAACCGATTTTAT TERM 878 1281774 - 1281795 + H 73 -7.5 -3.76641 | opp_overlap 1281774 1281773 TTAATTTTTTATAAT TTTATGTTT TATA AAACATAAA TTTAAATATTACAAT TERM 879 1282243 - 1282273 + G 74 -5.7 -4.54727 | gap 1, opp_overlap 1282252 AGCTACTTTAATTTC TGGAAGATATATTT CAAT AAATATG-CTTCCA TTTTCATTTAAAGAG TERM 880 1282833 - 1282821 - g 80 -6.3 -4.93316 | TAACAATAGGAAAAA TCCAA GAT TTGGA AGTAGATTTTGTTTG Msm_1278 1281845 - 1283050 + | ATPase Msm_1279 1283169 - 1283567 + | nucleic-acid-binding protein containing a Zn-ribbon Msm_1280 1283539 - 1284468 + | sirohydrochlorin cobaltochelatase TERM 881 1284898 - 1284869 - g 76 -8.7 -3.45023 | overlap 1284870 TCATCATCACCATAA CCACCATCATGAC CATG ATCATGATGATGA AGAAACATTTGATTT TERM 882 1284897 - 1284870 - g 77 -10 -2.66692 | overlap 1284869 CATCATCACCATAAC CACCATCATGAC CATG ATCATGATGATG AAGAAACATTTGATT Msm_1281 1284510 - 1285001 + | sirohydrochlorin cobaltochelatase TERM 883 1285006 - 1285035 + F 71 -8.7 -2.5031 | opp_overlap 1285013, overlap 1285005 1285003 1285013 1285016 1285025 AAAATTTATAATTCC TTAATCATCACCA CTTG TGGTGGTGCTTAA CTACTTTTGATATTA TERM 884 1286107 - 1286123 + G 75 -8.1 -3.60296 | TTGGTTACTTCCAGG CAGTTAT ATT ATAACTG TTTACAATCCAAGTA Msm_1282 1285103 - 1286701 + | putative adhesin-like protein TERM 885 1286706 - 1286721 + F 74 -9 -2.8136 | opp_overlap 1286706, overlap 1286705 TTACAGCTTAATTAA GTGGGA TTTT TCCCAC AATTTTTACTTTTTT TERM 886 1286721 - 1286706 - f 76 -9 -3.36785 | opp_overlap 1286706 1286705 TTACAGCTTAATTAA GTGGGA TTTT TCCCAC AATTTTTACTTTTTT Msm_1283 1286808 - 1287728 + | thiamine monphosphate kinase, ThiL Msm_1284 1287718 - 1288719 + | pyruvate formate-lyase activating enzyme, PflA Msm_1285 1289971 - 1288709 - | hypothetical protein Msm_1286 1291230 - 1289974 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, UbiD Msm_1287 1292259 - 1291240 - | phosphoribosylaminoimidazole carboxylase (NCAIR mutase), PurE TERM 887 1291613 - 1291623 + g 77 -4 -5.44721 | TTAAGTCTGTCTAGT GTAA CAC TTAC TTTTTTTCCAGTAAT Msm_1288 1293795 - 1292320 - | hypothetical protein TERM 888 1292888 - 1292874 - G 71 -8.6 -2.88134 | overlap 1292869 1292871 TTAAAGATAAGATTA TTCCGA TAA TCGGAA CACAAACAGCAATTA Msm_1289 1294237 - 1293809 - | GtrA-like surface polysaccharide biosynthesis protein, GtrA TERM 889 1294081 - 1294071 - G 81 -3.2 -5.72616 | ACTGATATAAAAAAA GCAA TAG CTGC TGAAATTAAATAATT TERM 890 1294489 - 1294476 - g 85 -6.7 -5.0538 | CTGGATTTTAAAAAA GCCTT ACCT AAGGC AGATATTTATGTCTA Msm_1290 1294401 - 1295327 + | glycosyltransferase TERM 891 1295344 - 1295330 - T 71 -5.8 -4.57275 | opp_overlap 1295329 TAAAAAAAGGTAAAA TGTTAA TAT TTAACA GCTGTTGTCAGCATT Msm_1291 1296837 - 1295332 - | hypothetical protein Msm_1292 1299000 - 1296853 - | transcriptional accessory protein S1 RNA binding family protein TERM 892 1298639 - 1298649 + g 87 -5.4 -5.52079 | overlap 1298644 ATAAGACTGGCCAGC GGTT CCA AACC TTTTTGTTTTGCTAT Msm_1293 1299332 - 1299847 + | nitroreductase NADH oxidase Msm_1294 1299977 - 1301614 + | glycosyl transferase family protein TERM 893 1301653 - 1301626 - T 100 -7.2 -6.23317 | opp_overlap 1301630, overlap 1301630 ATAAAAATAAAAAAA GAAAGTTTATGA TTTG TCATAAACTTTT ACAGCTTCTTCAACA TERM 894 1301649 - 1301630 - T 100 -8 -5.36181 | opp_overlap 1301630, overlap 1301626 AAATAAAAAAAGAAA GTTTATGA TTTG TCATAAAC TTTTACAGCTTCTTC TERM 895 1301630 - 1301649 + T 79 -8 -4.16921 | opp_overlap 1301630 1301626 AAATAAAAAAAGAAA GTTTATGA TTTG TCATAAAC TTTTACAGCTTCTTC Msm_1295 1302570 - 1301632 - | DNA-binding protein ribH 1302995 - 1302579 - | riboflavin synthase subunit beta Msm_1297 1305459 - 1303150 - | glycosyl transferase family protein TERM 896 1303900 - 1303911 + g 81 -4.4 -5.45652 | TAATGTGGGATGGGA GCTA ATTT TAGC TTTTTTATTAACAAT TERM 897 1305421 - 1305432 + g 78 -5.8 -4.91712 | opp_overlap 1305421 1305420 GTATGTTGGGATAAT GGCA CTTA TGCC TTTTTCTAAATTAGA Msm_1298 1306481 - 1305471 - | 3-isopropylmalate dehydrogenase, LeuB Msm_1299 1306935 - 1306453 - | 3-isopropylmalate dehydratase, small subunit, LeuD Msm_1300 1308187 - 1306940 - | 3-isopropylmalate dehydratase, large subunit, LeuC TERM 898 1306993 - 1306971 - G 70 -8.4 -3.01791 | overlap 1306957 ATTCTTCCTTCAATA GCTGAAGCAG CAG CTACTGCAGC AGAAGACAGGTAAAC Msm_1301 1309295 - 1308294 - | Fe-S oxidoreductase TERM 899 1309216 - 1309232 + g 78 -2.3 -5.80003 | overlap 1309217 TCTGTTTCTTCAGTA TTTTCAA CTT TTGAAAC TTTTTTATTTGTTGA Msm_1302 1309348 - 1310613 + | hypothetical protein Msm_1303 1311880 - 1310642 - | UDP-N-acetyl-D-mannosaminuronate dehydrogenase TERM 900 1312194 - 1312184 - g 79 -6.8 -4.65916 | opp_overlap 1312183 1312184 CGGATGTGAAGAAAA CCAG AAA CTGG CTTTCAGTGTAAATG Msm_1304 1311978 - 1312820 + | dTDP-4-dehydrorhamnose reductase, RfbD TERM 901 1312823 - 1312840 + T 76 -7.1 -4.15932 | opp_overlap 1312823, overlap 1312799 1312820 TTTAAAAAAATAAAA GAGAATT AGTT AATTCTC TTATTCTATTTTTAT TERM 902 1312840 - 1312823 - T 100 -7.1 -5.55855 | opp_overlap 1312799 1312823 1312820 TTTAAAAAAATAAAA GAGAATT AGTT AATTCTC TTATTCTATTTTTAT Msm_1305 1318951 - 1312841 - | adhesin-like protein TERM 903 1315042 - 1315052 + g 74 -4 -5.27206 | CTTTAGAATTTGTCA TTAC TGT GTAA TTTTTGTTATCTATG TERM 904 1318285 - 1318300 + g 74 -6.2 -4.35361 | overlap 1318276 AGTTTATGGAATTTG TCCAAT TATT ATTGGA TTTAATTTTATTATC TERM 905 1319641 - 1319653 + G 70 -6.3 -4.27467 | opp_overlap 1319640, overlap 1319626 TCACATTATCAAATG GGAAT CTT ATTCC TTTCTTAAATTCTAA Msm_1306 1319331 - 1323623 + | adhesin-like protein TERM 906 1323621 - 1323645 + F 79 -7.3 -4.48934 | opp_overlap 1323627 ATAACAATTTCAGCT TAAGAAGTTAA AAT TCAACTTCTTA TCTTTTTCTTTTTTA Msm_1307 1323885 - 1324754 + | dTDP-glucose pyrophosphorylase, RfbA Msm_1308 1324756 - 1325313 + | dTDP-4-dehydrorhamnose 3,5-epimerase Msm_1309 1325324 - 1326334 + | dTDP-D-glucose 4,6-dehydratase, RfbB Msm_1310 1326337 - 1327470 + | glycosyl transferase family protein Msm_1311 1327467 - 1328900 + | glycosyl transferase family protein Msm_1312 1328907 - 1330445 + | glycosyl transferase family protein Msm_1313 1330450 - 1333017 + | glycosyl transferase Msm_1314 1333267 - 1333103 - | hypothetical protein Msm_1315 1333281 - 1333982 + | transcriptional regulator TERM 907 1334173 - 1334208 + T 100 -7 -5.91981 | opp_overlap 1334201, overlap 1334180 1334201 GAAGTTTTCTTTCAG TATTTGTGTGTGTCCT ATGC ATGACACACTTAAATA TTTTTTTTAAGTTTT Msm_1316 1335442 - 1334333 - | glycosyl transferase family protein TERM 908 1335590 - 1335574 - g 74 -2.3 -5.66684 | CAATGTATAAAAAAA TTTATTC AAG GATTAAA AATTTGGAATTAATT Msm_1317 1335480 - 1337018 + | glycosyl transferase family protein TERM 909 1337490 - 1337537 + F 74 -9 -2.90941 | gap 1, opp_overlap 1337536, overlap 1337496 TTTAAAGTTGATTAG TGTGGATTTTTTTATTATTGAAT GTT ATTCA-TAATGAAAAAATTTACA TATATGGAATATGGT Msm_1318 1337560 - 1337826 + | hypothetical protein Msm_1319 1337845 - 1338123 + | hypothetical protein TERM 910 1338138 - 1338189 + F 78 -7.8 -4.2757 | gap 1, opp_overlap 1338161, overlap 1338134 AGCATTTTTAATTTT TAGTTTGAAAAAGTTTTTAA-TCAT TAA GTGTCTTAAAAACTTTTTTAAGCTA TTATCTTTTTTTAGA Msm_1320 1338272 - 1339312 + | glycosyltransferase TERM 911 1340119 - 1340140 + G 74 -7.3 -4.05033 | overlap 1340111 1340106 GTGGTGACATCTTTG CAGAAAGGA TGTA TCCTTGCTG TTTATATGCAATCAA Msm_1321 1339305 - 1340906 + | glycosyl transferase TERM 912 1341979 - 1341969 - g 75 -2.6 -5.53991 | TATTGATTAAAAAAA TAAA AAA TTTA GATAAGGACAATGCA Msm_1322 1340924 - 1342411 + | glycosyl transferase family protein Msm_1323 1342401 - 1343447 + | glycosyl transferase family protein TERM 913 1344148 - 1344136 - g 79 -2.7 -5.73978 | ATCAGAAATAAAAAA TACTT GGA AAGCA TGGTCAATGGTTATT Msm_1324 1343449 - 1344483 + | glycosyl transferase family protein Msm_1325 1344658 - 1345443 + | polysaccharide/polyol phosphate ABC transporter, permease component Msm_1326 1345459 - 1347219 + | polysaccharide/polyol phosphate ABC transporter, ATPase component Msm_1327 1347222 - 1348316 + | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase Msm_1328 1348309 - 1349271 + | glycosyl transferase family protein Msm_1329 1349277 - 1350242 + | glycosyl transferase Msm_1330 1350258 - 1351115 + | glycosyl transferase Msm_1331 1351165 - 1352568 + | sugar transferase, WcaJ TERM 914 1353558 - 1353577 + G 70 -6.5 -4.20918 | AAGGAGATTTTGATG TTCCTGA ATTCAC TCAGGAA TTTATTAAAATTGGA TERM 915 1354784 - 1354794 + G 70 -4 -5.06089 | AATACTGTAGATCAG TCAT CAG ATGA TTTTGTTTGTAGTTT Msm_1332 1352723 - 1355104 + | replication factor A radA 1355135 - 1356070 + | DNA repair and recombination protein RadA Msm_1334 1356382 - 1357287 + | permease Msm_1335 1357288 - 1357437 + | hypothetical protein TERM 916 1357570 - 1357586 + F 71 -5.9 -4.22948 | overlap 1357572 ATTGTTATTATTTTA TAGCTTT TAG AAAGCTG TTTTGAATCGGTTTT TERM 917 1358374 - 1358351 - g 89 -11.8 -3.36073 | overlap 1358349 TACATGGTCGAAAGA CACCCTACCA TTGG TGGTAGGATG GGACAATTAGATAAA Msm_1336 1357805 - 1359793 + | heterodisulfide reductase, subunit A, HdrA TERM 918 1359951 - 1359937 - f 71 -5.8 -4.57073 | TATTTGCTGCAAAAA TCTTAT ATT ATAAGA TAAGCATAAATATCT TERM 919 1360313 - 1360299 - g 72 -8.6 -3.14564 | opp_overlap 1360298 1360299 CTATTTCTGGAGTAA CTGCTA ATT TAGCAG CATTTTTCGGTTATT TERM 920 1360525 - 1360488 - g 84 -3.5 -5.87996 | CAATGAATAAAAAAA TCCTCGAAGAAAAACCA AAAA TAGTTCTTTTCGGAGGA AGTTTATTCTTGTTC glyA 1360013 - 1361281 + | serine hydroxymethyltransferase Msm_1338 1361287 - 1361988 + | flavoprotein Msm_1339 1362338 - 1361985 - | hypothetical protein Msm_1340 1362499 - 1363704 + | S-adenosylmethionine synthetase TERM 921 1363779 - 1363795 + F 86 -5.2 -5.99318 | opp_overlap 1363779 TTCAACTAAATTAAA TCTCTA TTTAT TAGAGA TTTTTATTTTTTTTT ileS 1363866 - 1367138 + | isoleucyl-tRNA synthetase Msm_1342 1367148 - 1369298 + | phosphoribosylformylglycinamidine synthase II Msm_1343 1369311 - 1370528 + | molybdenum cofactor biosynthesis protein, MoeA Msm_1344 1370545 - 1371690 + | membrane-associated Zn-dependent protease Msm_1345 1371821 - 1371702 - | hypothetical protein Msm_1346 1372419 - 1372021 - | hypothetical protein Msm_1347 1372557 - 1372676 + | hypothetical protein TERM 922 1372695 - 1372661 - T 76 -3.8 -5.81412 | gap 1 CGGAGTTAAAAAAAA GATTAAGG-AAGAAT AATTAA ATTCTTTCCTAAATC TAGAAGTATCTTTCT Msm_1348 1373108 - 1372695 - | rubrerythrin Msm_1349 1374383 - 1373157 - | F420H2-oxidase/flavoprotein, FprA Msm_1350 1374602 - 1375363 + | ArsR family transcriptional regulator Msm_1351 1376070 - 1375366 - | precorrin-2 C20-methyltransferase, CbiL Msm_1352 1376163 - 1378001 + | ATP-dependent DNA helicase Msm_1353 1379123 - 1378104 - | putative topoisomerase IV, subunit A Msm_1354 1379449 - 1379135 - | DNA-directed RNA polymerase subunit M, RpoM TERM 923 1379352 - 1379365 + g 74 -3.9 -5.24989 | ACATTATATTCTGAT TTATC TTTT GATAA TTTTTTAGTATATCC Msm_1355 1379968 - 1379546 - | ADP-ribose pyrophosphatase Msm_1356 1380295 - 1380005 - | DNA-directed RNA polymerase, subunit L, RpoL Msm_1357 1380879 - 1380307 - | exosome complex RNA-binding protein Csl4 TERM 924 1380845 - 1380865 + g 77 -3.9 -5.32882 | overlap 1380847 ATTCCTAGTTTATCT CCAGGCATT ACA AATGCCCCG TTTTTTATACTCATA Msm_1358 1381952 - 1380948 - | diphthamide synthase, subunit DPH2 Msm_1359 1382523 - 1381954 - | adenine phosphoribosyltransferase TERM 925 1382578 - 1382548 - H 73 -5 -4.93595 | opp_overlap 1382548 1382558 1382567, overlap 1382540 1382567 1382570 ACAAAAATTTAAAAA TTAAATCAAATATA ATA TATATTTAATATAA ATATTAATATAAATT TERM 926 1383790 - 1383780 - g 76 -5.4 -5.0917 | TGACTAAAAAAGAAA TGGA AAA TCCA AAGTTGATTAAACAG Msm_1360 1382627 - 1383970 + | signal recognition particle protein Srp54 Msm_1361 1383976 - 1385181 + | pseudouridylate synthase TERM 927 1385490 - 1385478 - g 77 -7.7 -4.02653 | opp_overlap 1385478 AATCAACTGAAATAA CTGCA ACA TGCAG TGTTAAAACATTAGG Msm_1362 1385192 - 1385659 + | molybdenum cofactor biosynthesis protein C, MoaC Msm_1363 1385729 - 1385890 + | preprotein translocase subunit SecG TERM 928 1385881 - 1385899 + F 100 -6 -5.80727 | overlap 1385882 TTTTGTTTTAAGATT CTCTGGAT AAA ATCCAGAC TTTTTTCTTGTTTTT TERM 929 1385882 - 1385898 + F 84 -9.5 -4.02946 | overlap 1385881 TTTGTTTTAAGATTC TCTGGAT AAA ATCCAGA CTTTTTTCTTGTTTT TERM 930 1385903 - 1385931 + F 79 -4.7 -5.56264 | overlap 1385905 1385906 TAAAATCCAGACTTT TTTCTTGTTTTTT TTA AAAAAACAAGCTA TTTTTTATATTTAGG TERM 931 1385905 - 1385929 + F 79 -7.3 -4.40478 | overlap 1385903 1385906 AAATCCAGACTTTTT TCTTGTTTTTT TTA AAAAAACAAGC TATTTTTTATATTTA TERM 932 1385906 - 1385928 + F 85 -10.8 -3.21847 | overlap 1385905 1385903 AATCCAGACTTTTTT CTTGTTTTTT TTA AAAAAACAAG CTATTTTTTATATTT TERM 933 1386251 - 1386241 - g 76 -5.4 -5.03405 | AAGATTATACAAAAA TGCT GAA AGCA GGTGCGGATAAATGT Msm_1364 1385955 - 1386779 + | imidazole glycerol phosphate synthase subunit HisF TERM 934 1387056 - 1387039 - g 71 -7 -4.02707 | opp_overlap 1387042 TAAATATTTAAATAA TCAGCC GGAATT GGCTGA TATGACTAATTTTTG Msm_1365 1386776 - 1387711 + | 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase Msm_1366 1387716 - 1388072 + | lactoylglutathione lyase, LglU Msm_1367 1388517 - 1388083 - | peptidyl-prolyl cis-trans isomerase, PpiB Msm_1368 1388592 - 1389758 + | acetylornithine aminotransferase Msm_1369 1390159 - 1389755 - | MutT-related protein NUDIX family Msm_1370 1390321 - 1391397 + | hypothetical protein Msm_1371 1391486 - 1392769 + | diaminopimelate decarboxylase, LysA Msm_1372 1392778 - 1393638 + | diaminopimelate epimerase TERM 935 1393625 - 1393644 + T 90 -8 -4.99665 | AATTAGTATTTGATG GAGAAATT CAGT AATTTCTC TTTTACTTTTTTTTA Msm_1373 1394238 - 1393657 - | methyltransferase, HemK ksgA 1395156 - 1394245 - | dimethyladenosine transferase Msm_1375 1395822 - 1395166 - | RNA-binding protein TERM 936 1395868 - 1395846 - R 71 -8.4 -2.71731 | opp_overlap 1395846 1395847 TTCACGTTTGAATTA CTCCGTCCTC ATG GAGGATGGAA TTTTCTTACATTAAC TERM 937 1395846 - 1395868 + r 86 -8.4 -4.72029 | opp_overlap 1395846, overlap 1395847 TTCACGTTTGAATTA CTCCGTCCTC ATG GAGGATGGAA TTTTCTTACATTAAC TERM 938 1395847 - 1395867 + r 91 -11.9 -3.42494 | opp_overlap 1395846, overlap 1395846 TCACGTTTGAATTAC TCCGTCCTC ATG GAGGATGGA ATTTTCTTACATTAA TERM 939 1396077 - 1396058 - R 86 -8 -4.90519 | opp_overlap 1396061 AAAGTAAAAAAAGAA GAATAGTT TAAA AACTATTC GATGATAGTATACTG Msm_1376 1396416 - 1396072 - | DNA-directed RNA polymerase subunit F Msm_1377 1396723 - 1396427 - | 50S ribosomal protein L21e TERM 940 1396618 - 1396633 + g 70 -6.2 -4.29227 | overlap 1396621 GGACTAAGTCTCCTT CTTCAA ATTT TTGAAG TTTGTTGGTAATTGG TERM 941 1396857 - 1396836 - R 73 -4.6 -5.1286 | opp_overlap 1396836 1396848 TAAAAATTATAAAAA TATTATCA TTTATT TGATAATA TTAAATTATTTCTAT Msm_1378 1397214 - 1396918 - | ABM family monooxygenase TERM 942 1397262 - 1397243 - R 84 -5.1 -5.75538 | opp_overlap 1397243 TTTAAAAAAGAAAAA GTAATGA AATTAA TCATTAC TTTAATCTATTTTTA Msm_1379 1397470 - 1397264 - | NADP-dependent alcohol dehydrogenase Msm_1380 1398165 - 1397599 - | NADP-dependent alcohol dehydrogenase Msm_1381 1398338 - 1398156 - | putative NADP-dependent alcohol dehydrogenase Msm_1382 1399136 - 1398525 - | hypothetical protein Msm_1383 1401625 - 1399295 - | anaerobic ribonucleoside-triphosphate reductase, NrdD TERM 943 1400716 - 1400732 + g 80 -6.5 -4.81212 | opp_overlap 1400708 1400715 1400711, overlap 1400718 TCCATAAGGACATAG CTTGTCC TCC GGACATG TTTTGTTGTGATGCA TERM 944 1400718 - 1400730 + g 77 -7.7 -4.02119 | opp_overlap 1400708 1400715 1400711, overlap 1400716 CATAAGGACATAGCT TGTCC TCC GGACA TGTTTTGTTGTGATG TERM 945 1401791 - 1401818 + r 89 -10 -4.54343 | TTAAAAAGTATTGAT GTTCTTTAGAAG AAAA CATCTAAAGAAC TTTGTTTGGATTTGT Msm_1384 1405101 - 1401796 - | DNA polymerase II large subunit TERM 946 1404988 - 1404974 - G 70 -7.2 -3.64822 | ACTCTTTCAGCTAAA TCCTTT GCT AAAGGA ACTTCACTTTTTGTT TERM 947 1405205 - 1405221 + G 71 -5.3 -4.6391 | opp_overlap 1405195 1405208 1405211 AAGATTTAAATAATT TAATAAT AAT ATTATTA TTTTGTATACTTGTT Msm_1385 1405162 - 1406043 + | acyltransferase Msm_1386 1406067 - 1406543 + | cytosine deaminase Msm_1387 1408123 - 1406540 - | lysyl-tRNA synthetase (class I), LysS TERM 948 1408437 - 1408405 - R 100 -6.5 -5.55698 | opp_overlap 1408408 1408413, overlap 1408408 1408413 TATAATTTAAAAAAA GAATAAAATAGATAG AAT CTATCTATTTAATTA AGTCGGAATCGGACT TERM 949 1408434 - 1408408 - R 86 -8.2 -4.83715 | opp_overlap 1408408 1408413, overlap 1408405 1408413 AATTTAAAAAAAGAA TAAAATAGATAG AAT CTATCTATTTAA TTAAGTCGGAATCGG TERM 950 1408408 - 1408434 + r 70 -8.2 -3.06183 | opp_overlap 1408408 1408405 1408413, overlap 1408413 AATTTAAAAAAAGAA TAAAATAGATAG AAT CTATCTATTTAA TTAAGTCGGAATCGG TERM 951 1408429 - 1408413 - R 93 -8.1 -5.25154 | opp_overlap 1408408 1408413, overlap 1408408 1408405 AAAAAAAGAATAAAA TAGATAG AAT CTATCTA TTTAATTAAGTCGGA TERM 952 1408413 - 1408429 + r 76 -8.1 -3.93288 | opp_overlap 1408413 1408408 1408405, overlap 1408408 AAAAAAAGAATAAAA TAGATAG AAT CTATCTA TTTAATTAAGTCGGA Msm_1388 1409725 - 1408427 - | thiamine biosynthesis protein ThiC TERM 953 1408497 - 1408511 + g 76 -8.6 -3.56318 | overlap 1408495 GCACAATAATTTCCA CACATG GTA CATGTG TCTTCTTCTTCAGGA TERM 954 1409787 - 1409771 - R 71 -6.7 -4.13748 | opp_overlap 1409771 1409769 1409774, overlap 1409774 TTTAAAAATATCAAA TAAGTTT TAA AAACTTA TCATTTTTGGTTGAT Msm_1389 1410826 - 1409912 - | ribokinase family sugar kinase Msm_1390 1411842 - 1410973 - | LysR family transcriptional regulator TERM 955 1411567 - 1411581 + g 71 -2.2 -5.36965 | TTCAGAGGTTTTATC TATTTG GAT TAAATA TTTTTTATACTCTTC Msm_1391 1411916 - 1412506 + | sugar phosphate isomerase involved in capsule formation, GutQ TERM 956 1412494 - 1412522 + T 76 -6.9 -4.15932 | opp_overlap 1412494 1412507, overlap 1412496 AAAATCAAGACACAC TGTTTTAGAGTAA TTT TAACTCTAAAATA TTATTCTATTTTTAT TERM 957 1412496 - 1412520 + T 70 -7.3 -3.63967 | opp_overlap 1412494 1412507, overlap 1412494 AATCAAGACACACTG TTTTAGAGTAA TTT TAACTCTAAAA TATTATTCTATTTTT Msm_1392 1413264 - 1412515 - | formate dehydrogenase accessory protein FdhD, FdhD Msm_1393 1413398 - 1414498 + | iron(III) ABC transporter, substrate-binding component TERM 958 1415464 - 1415479 + G 77 -7.6 -4.06096 | AATTTTAACAGCAGT TATCGG TGTT CCGATA TTCTTGTATTTACTT Msm_1394 1414508 - 1415521 + | iron(III) ABC transporter, permease component Msm_1395 1415512 - 1416315 + | iron(III) ABC transporter, ATPase component TERM 959 1416671 - 1416655 - g 76 -6.5 -4.7064 | AATAAAAAAGATAAA TCTCAGG AAA CCAGAGA AGAAATGATTCACCG Msm_1396 1416325 - 1416903 + | tungsten formylmethanofuran dehydrogenase, subunit E, FwdE TERM 960 1416907 - 1416923 + T 77 -6.5 -4.66395 | opp_overlap 1416908, overlap 1416908 GATGATGAATAATTA AGCCACA TTT TGTGGCA TTTTACTATTTTTTT TERM 961 1416922 - 1416908 - T 82 -10 -3.56544 | opp_overlap 1416908 1416907 ATGATGAATAATTAA GCCACA TTT TGTGGC ATTTTACTATTTTTT TERM 962 1416908 - 1416922 + T 81 -10 -3.36177 | opp_overlap 1416908, overlap 1416907 ATGATGAATAATTAA GCCACA TTT TGTGGC ATTTTACTATTTTTT TERM 963 1416955 - 1416978 + T 76 -6.9 -4.24404 | opp_overlap 1416954 1416955 TAAAATAAAAAAAGT TAGATAGTA AATAAG TACTATCTA TTTTGGAATTTCACT Msm_1397 1421088 - 1416976 - | adhesin-like protein TERM 964 1417830 - 1417846 + g 70 -7.3 -3.6682 | TGTTCTTTTGAATGG TGGTGTA TTT TGCACCA TTTAAGTAAATCCCA TERM 965 1421213 - 1421186 - R 73 -4.2 -5.33985 | opp_overlap 1421189 1421190 1421192, overlap 1421189 1421190 TTTAAAAAAAAGAAA GAAGTAGAGGTT ATAA AACCTCTAATTT AATATTTATTGGTTA TERM 966 1421210 - 1421189 - R 75 -5.9 -4.68355 | opp_overlap 1421189 1421190 1421192, overlap 1421186 1421190 AAAAAAAAGAAAGAA GTAGAGGTT ATAA AACCTCTAA TTTAATATTTATTGG TERM 967 1421209 - 1421190 - R 79 -9.4 -3.35523 | opp_overlap 1421189 1421190 1421192, overlap 1421189 1421186 AAAAAAAGAAAGAAG TAGAGGTT ATAA AACCTCTA ATTTAATATTTATTG TERM 968 1421190 - 1421209 + r 77 -9.4 -3.03631 | opp_overlap 1421190 1421189 1421186, overlap 1421189 1421192 AAAAAAAGAAAGAAG TAGAGGTT ATAA AACCTCTA ATTTAATATTTATTG Msm_1398 1423522 - 1421219 - | adhesin-like protein TERM 969 1421319 - 1421331 + g 71 -5.5 -4.61353 | opp_overlap 1421309, overlap 1421317 TTTAAGCTAGCTTCA CCAGC TTC GTTGG TTGTTTTTGTGTATA TERM 970 1423592 - 1423580 - H 89 -6.3 -5.37345 | TCTAACGACAAAAAA GATAG TTA CTATC ATTAAGGTATTATTA TERM 971 1424749 - 1424731 - g 73 -9 -2.92988 | overlap 1424728 ATAAATCAAATATTA TTGGAAAT TTA ATTTCCAA TTCAAAAAGTTTTGG Msm_1399 1423923 - 1425872 + | adhesin-like protein TERM 972 1425854 - 1425884 + F 84 -6.3 -5.31158 | opp_overlap 1425857, overlap 1425857 AAAATCCATGATTGA AAAGAAAAATGGC AAATA GTCATTTTTCTTC TTTTTACTTTTTTTA TERM 973 1425857 - 1425881 + F 82 -8 -4.64346 | opp_overlap 1425857, overlap 1425854 ATCCATGATTGAAAA GAAAAATGGC AAATA GTCATTTTTC TTCTTTTTACTTTTT TERM 974 1426567 - 1426581 + G 74 -2.2 -5.54338 | ATAAGCTGGTGTATG TTATTA TTT TAATGA TTTTTATTTTGATTG Msm_1400 1425978 - 1426637 + | peptide ABC transporter permease Msm_1401 1426649 - 1427290 + | biopolymer transport protein Msm_1402 1427296 - 1427595 + | hypothetical protein Msm_1403 1428150 - 1428953 + | formate/nitrite transporter, FdhC TERM 975 1428973 - 1429001 + F 80 -7.6 -4.40333 | opp_overlap 1428977, overlap 1428977 AGAACTGAATTAAAA TAAATAAGAAGC TTTAT GCTTCTTATTAA TTTATATTATTTAAA TERM 976 1428997 - 1428977 - f 90 -8.4 -4.78077 | opp_overlap 1428973 1428977 CTGAATTAAAATAAA TAAGAAGC TTTAT GCTTCTTA TTAATTTATATTATT TERM 977 1428977 - 1428997 + F 77 -8.4 -3.71851 | opp_overlap 1428977, overlap 1428973 CTGAATTAAAATAAA TAAGAAGC TTTAT GCTTCTTA TTAATTTATATTATT TERM 978 1430402 - 1430384 - g 70 -7.4 -3.62255 | overlap 1430386 GTGAACAAGAAGGAA CATTCACC AAC GGTGAAAG AAGAGTACAATGTTT TERM 979 1430400 - 1430386 - g 76 -8.6 -3.37882 | overlap 1430384 GAACAAGAAGGAACA TTCACC AAC GGTGAA AGAAGAGTACAATGT Msm_1404 1428988 - 1431096 + | formate dehydrogenase, alpha subunit, FdhA Msm_1405 1431103 - 1432308 + | formate dehydrogenase, beta subunit, FdhB TERM 980 1432301 - 1432326 + T 86 -7.7 -4.96028 | opp_overlap 1432306 AACCAAAAGATAACT GGAAATAGAGT TTTT ACTCTATTTAC TTCTTTTTTTTAAAA moaA 1433316 - 1432387 - | molybdenum cofactor biosynthesis protein A Msm_1407 1434370 - 1433321 - | molybdopterin-guanine dinucleotide biosynthesis protein B, MobB Msm_1408 1434758 - 1435219 + | tungsten formylmethanofuran dehydrogenase, subunit E, FwdE Msm_1409 1435222 - 1436319 + | tungsten formylmethanofuran dehydrogenase, subunit F, FwdF Msm_1410 1436328 - 1436558 + | tungsten formylmethanofuran dehydrogenase, subunit G, FwdG Msm_1411 1436570 - 1437139 + | tungsten formylmethanofuran dehydrogenase, subunit D, FwdD Msm_1412 1437129 - 1438505 + | tungsten formylmethanofuran dehydrogenase, subunit B, FwdB TERM 981 1438604 - 1438581 - g 74 -4 -5.25803 | opp_overlap 1438581 AATGGTGAGAAAAAA GATATCAT GGTTAAAG ATGATATC ATTGTTGAAGAAGTC Msm_1413 1438512 - 1440224 + | tungsten formylmethanofuran dehydrogenase, subunit A, FwdA Msm_1414 1440230 - 1441105 + | tungsten formylmethanofuran dehydrogenase, subunit C, FwdC TERM 982 1441087 - 1441115 + F 71 -3.4 -5.45056 | gap 2, opp_overlap 1441091 1441093 1441095, overlap 1441095 ATATACTTCAATTAG GGAATACAGGAATT TAT AATTCCT-T-TTCC TTTATTTTTTTTTGA TERM 983 1441095 - 1441109 + F 82 -7.2 -4.78512 | opp_overlap 1441093 1441091 1441095, overlap 1441087 CAATTAGGGAATACA GGAATT TAT AATTCC TTTTCCTTTATTTTT Msm_1415 1441297 - 1441590 + | hypothetical protein Msm_1416 1441699 - 1441989 + | hypothetical protein Msm_1417 1443674 - 1441995 - | hypothetical protein TERM 984 1443421 - 1443395 - G 85 -8.2 -4.47786 | AACTAGTCAAATAAA TCATTTCTTCAA ATT TTGAATAAATGA AATCAACCTGATCAT TERM 985 1443754 - 1443777 + r 74 -5.5 -4.90302 | opp_overlap 1443752 1443754, overlap 1443764 AAAATAAAAAAAGTA TATTTAGAT TTAAAT ATCTAAATA TTTGTTTTGTTCGTA Msm_1418 1445136 - 1443763 - | glutamine synthetase, GlnA TERM 986 1445351 - 1445384 + H 89 -5.5 -5.59502 | ATGTTCAAGTTTAAA TAAATGAGTCTGTAA AATT TTATAGGCTTATTTG TTTTTTAATTTTTTA Msm_1419 1445509 - 1446714 + | putative transposase TERM 987 1448374 - 1448390 + G 76 -9.5 -3.12521 | opp_overlap 1448373 1448372, overlap 1448372 ACTAAATTAAAATGT CCTGTTT GTA AAACAGG TGTGGTTTTGCTGGA Msm_1420 1446811 - 1448796 + | UvrD/Rep family helicase Msm_1421 1450577 - 1448793 - | hypothetical protein TERM 988 1449551 - 1449572 + g 71 -3.1 -5.24551 | TGTCGTAGTTTGTTT CATCTAATT CTAT AATTAAATG TTTTTCTTCATTTGA TERM 989 1450551 - 1450563 + g 70 -4.1 -5.07486 | opp_overlap 1450553, overlap 1450553 AAAAAGTAGAAGGAA GATGG TTA CTATC TTTTTATTAACCATA Msm_1422 1451155 - 1450592 - | LemA protein Msm_1423 1451376 - 1452290 + | exopolyphosphatase, GppA Msm_1424 1452290 - 1454431 + | polyphosphate kinase TERM 990 1454464 - 1454443 - f 70 -7.5 -3.38218 | opp_overlap 1454443, overlap 1454448 TTAAATAGTTTATAA TGAAATTTT TATA AAAATTTCA TTTTGATTCCATTTT TERM 991 1454443 - 1454464 + F 80 -7.5 -4.48175 | opp_overlap 1454443 1454448 TTAAATAGTTTATAA TGAAATTTT TATA AAAATTTCA TTTTGATTCCATTTT TERM 992 1454862 - 1454879 + F 71 -7.1 -3.77177 | opp_overlap 1454872, overlap 1454872 TTGTTGAAAGAACTG TGTTTTG AAAT CAAAACA TTTGAATCTATTACT rps13p 1454936 - 1455379 + | 30S ribosomal protein S13P rps4p 1455471 - 1456007 + | 30S ribosomal protein S4 rps11p 1456019 - 1456411 + | 30S ribosomal protein S11P Msm_1428 1456424 - 1457248 + | DNA-directed RNA polymerase subunit D Msm_1429 1457248 - 1457613 + | 50S ribosomal protein L18e TERM 993 1457904 - 1457893 - g 71 -3 -5.26316 | opp_overlap 1457893 TTACCTTATAAAAAA TCTA AAGG TAGA GTTGCTTTCAAAGGT Msm_1430 1457632 - 1458054 + | ribosomal protein L13p rps9p 1458073 - 1458474 + | 30S ribosomal protein S9P TERM 994 1458465 - 1458485 + F 74 -5.5 -4.73912 | opp_overlap 1458457 1458464 1458465 ACGTAAACAAAAAAG TTACAGATA ATT TTTCTGTAA TTTTATAATTTTTAT Msm_1432 1458526 - 1458696 + | DNA-directed RNA polymerase subunit N Msm_1433 1458766 - 1458963 + | DNA-directed RNA polymerase, subunit K, RpoK Msm_1434 1459461 - 1459051 - | hypothetical protein Msm_1435 1459460 - 1460347 + | enolase Msm_1436 1460371 - 1460565 + | ferredoxin TERM 995 1460795 - 1460778 - g 76 -7.1 -4.18167 | overlap 1460787 AAAGAATTAGACAAA TTGCTAA ACTC TTAGCAA GATACGACCCAGAAG rps2P 1460618 - 1461214 + | 30S ribosomal protein S2 Msm_1438 1461224 - 1462072 + | dioxygenase TERM 996 1462166 - 1462153 - g 71 -8.1 -3.21099 | opp_overlap 1462160 GTTGTTTATGATGAA CCTGC GATT GCAGG AGCAGTTAATAAAAG Msm_1439 1462084 - 1463046 + | mevalonate kinase TERM 997 1463800 - 1463782 - g 73 -7.6 -3.66497 | TAATAAATGCTGAAA TTGAAAAT AAT ATTTTCAA AGCTTTAAATAATGA Msm_1440 1463052 - 1463849 + | kinase Msm_1441 1463857 - 1464903 + | isopentenyl pyrophosphate isomerase TERM 998 1465735 - 1465713 - g 72 -9.2 -2.67244 | opp_overlap 1465712 1465711, overlap 1465701 CCACAGGGAAATTTA TTTCCTTGGA AGA TCCATGGAAA GGTTCTGTGGCATTG Msm_1442 1464910 - 1466274 + | RNA hydrolase TERM 999 1466685 - 1466705 + G 73 -9.1 -2.81361 | opp_overlap 1466687 1466690, overlap 1466684 1466681 CTCAGTTAAGCCAGA CATTAGCTA CTG TAGCTGATG CTTGTGTTAAAATTT Msm_1443 1466276 - 1467268 + | bifunctional short chain isoprenyl diphosphate synthase, IdsA TERM 1000 1467276 - 1467292 + F 81 -5.9 -5.03284 | overlap 1467278 ATTCTTAAATTCATT TGGGATT TCA AATCCTA TTTCTTTCTTTTTTT TERM 1001 1468453 - 1468473 + G 91 -8.3 -5.01535 | opp_overlap 1468441 1468440 1468452, overlap 1468441 1468441 AACTTCAGAAATATT CTGCAATTG TCA CATTTGCAG TTTTTGTAATTGTAA Msm_1444 1467531 - 1469048 + | hypothetical protein Msm_1445 1469811 - 1469026 - | transcriptional regulator Msm_1446 1469927 - 1471222 + | hydroxylamine reductase Msm_1447 1471224 - 1471553 + | hypothetical protein TERM 1002 1471603 - 1471632 + T 71 -8.2 -3.23708 | overlap 1471601 1471601 ATTTGTGTAATTAGG GTTATTTATAAT GTGAAA ATTATAAATAAC TACTTTTTCCACCAA Msm_1448 1472450 - 1471632 - | SAM-dependent methyltransferase Msm_1449 1473557 - 1472478 - | putative O-linked GlcNAc transferase TERM 1003 1472675 - 1472685 + g 71 -3.2 -5.26119 | CTATGCCCATATTAA GTAG TTC CTGC TTTTCTTTTTCACAA Msm_1450 1474601 - 1473573 - | aldo/keto reductase family oxidoreductase Msm_1451 1475615 - 1474611 - | O-linked GlcNAc transferase TERM 1004 1476007 - 1475995 - g 93 -6.3 -5.61913 | overlap 1475998 AATAAACAGAAAAAA GAAGA AGG TCTTC AGGAGCTTCCAGGTT gltX 1475746 - 1477413 + | glutamyl-tRNA synthetase Msm_1453 1477423 - 1477881 + | hypothetical protein TERM 1005 1477877 - 1477915 + T 74 -3.4 -5.62219 | opp_overlap 1477887, overlap 1477882 1477887 GTTACAGGTTAAATG AATAAAAAAATAAGAAAA ATT TTTTCTTATTTTAATATA TTTTTTTAATGTCTT TERM 1006 1477905 - 1477887 - T 100 -7.6 -5.9003 | opp_overlap 1477882 1477877 1477887 AAATGAATAAAAAAA TAAGAAAA ATT TTTTCTTA TTTTAATATATTTTT TERM 1007 1477887 - 1477905 + T 80 -7.6 -4.50259 | opp_overlap 1477887, overlap 1477882 1477877 AAATGAATAAAAAAA TAAGAAAA ATT TTTTCTTA TTTTAATATATTTTT Msm_1454 1479623 - 1477908 - | ATPase TERM 1008 1478405 - 1478436 + g 79 -6.8 -4.67697 | CAAGTTTTTCTTTTA CTTCATTAAATATT TTGG AATTTTTAATGGAG TTTGTTATTTTAGCC TERM 1009 1480707 - 1480721 + G 74 -6.4 -4.36554 | overlap 1480708 CATATCCTGTTCAGG TTGCAG CAG CTGCAG TTTATTCTGATGATG Msm_1455 1479806 - 1481041 + | L,L-diaminopimelate aminotransferase Msm_1456 1481051 - 1481746 + | hypothetical protein Msm_1457 1481751 - 1482335 + | hypothetical protein Msm_1458 1482346 - 1482930 + | hypothetical protein TERM 1010 1482942 - 1482965 + T 74 -8.3 -3.70051 | opp_overlap 1482942, overlap 1482940 TTAAAATAAAATTAA TAGCTGTTT TGTTAT AAACAGCTA TCTTTTAAACTCTTT TERM 1011 1482965 - 1482942 - T 76 -8.3 -3.93251 | opp_overlap 1482942 1482940 TTAAAATAAAATTAA TAGCTGTTT TGTTAT AAACAGCTA TCTTTTAAACTCTTT Msm_1459 1484371 - 1482989 - | multidrug efflux permease, AraJ TERM 1012 1484589 - 1484567 - R 100 -7.8 -6.09196 | opp_overlap 1484570, overlap 1484570 TTTAAAATAAAAAAA GAATAGGTGT TTA ACACCTATTT GTAACTTAAAGCTTT TERM 1013 1484586 - 1484570 - R 95 -9.5 -5.04908 | opp_overlap 1484570, overlap 1484567 AAAATAAAAAAAGAA TAGGTGT TTA ACACCTA TTTGTAACTTAAAGC TERM 1014 1484570 - 1484586 + r 84 -9.5 -3.97368 | opp_overlap 1484570 1484567 AAAATAAAAAAAGAA TAGGTGT TTA ACACCTA TTTGTAACTTAAAGC Msm_1460 1485822 - 1484584 - | energy-converting hydrogenase B, subunit K, EhbK Msm_1461 1486239 - 1485838 - | methyl viologen-reducing hydrogenase, delta subunit, MvhD Msm_1462 1487404 - 1486256 - | formate dehydrogenase, beta subunit, FdhB Msm_1463 1488525 - 1487416 - | formate dehydrogenase, alpha subunit, FdhA Msm_1464 1488904 - 1488542 - | FlpE-related protein TERM 1015 1489520 - 1489539 + r 76 -6.6 -4.40132 | opp_overlap 1489520, overlap 1489503 TTTCAAAAAAAGTAA TACTTTTT TATC AAAAAGTA TTTATTATACTTAGT TERM 1016 1489539 - 1489520 - R 71 -6.6 -4.03885 | opp_overlap 1489503 1489520 TTTCAAAAAAAGTAA TACTTTTT TATC AAAAAGTA TTTATTATACTTAGT TERM 1017 1489728 - 1489701 - R 100 -11.6 -5.61596 | opp_overlap 1489704 1489707 ATTTTTACAAAAAAA TAAGAATTAGTT TTTT AACTAATTCTTA TAGCCTTTATGTACT TERM 1018 1489704 - 1489725 + r 78 -8.9 -3.41528 | opp_overlap 1489701, overlap 1489707 TTTACAAAAAAATAA GAATTAGTT TTTT AACTAATTC TTATAGCCTTTATGT Msm_1465 1491159 - 1489768 - | multidrug efflux permease, AraJ Msm_1466 1491872 - 1491258 - | hypothetical protein TERM 1019 1491711 - 1491741 + g 77 -8.5 -3.7108 | gap 1, overlap 1491713 AAGGTTTACTTCATC TGTTGT-GTTCCAG GCTT CTGGAACTACAATA TTTGAATGTCCAAAT TERM 1020 1491713 - 1491739 + g 78 -8.9 -3.43773 | gap 1, overlap 1491711 GGTTTACTTCATCTG TTGT-GTTCCAG GCTT CTGGAACTACAA TATTTGAATGTCCAA TERM 1021 1491834 - 1491822 - G 72 -3.5 -5.28778 | ATTAGCCACAAAAAA TATTA TTA TAATA GCAATAACAATGCTC Msm_1467 1492041 - 1492190 + | hypothetical protein Msm_1468 1492204 - 1493226 + | adenylosuccinate synthetase TERM 1022 1493430 - 1493405 - g 81 -4.1 -5.5353 | opp_overlap 1493409, overlap 1493406 1493409 GATATGAATAAAAAA TCAATTATAAC TATT GTTATAATCGT TGCAGTTATCATTAT TERM 1023 1493429 - 1493406 - g 74 -7.6 -3.90491 | opp_overlap 1493409, overlap 1493405 1493409 ATATGAATAAAAAAT CAATTATAAC TATT GTTATAATCG TTGCAGTTATCATTA Msm_1469 1493393 - 1494343 + | nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding component, TauA Msm_1470 1495018 - 1494557 - | hypothetical protein TERM 1024 1494681 - 1494699 + g 74 -7.5 -3.94933 | opp_overlap 1494680, overlap 1494677 1494680 ATAGCTTGATCCAAT TCGGAAT TGTCT ATTCCGA TATTTTTCAAATTGC TERM 1025 1495074 - 1495095 + r 75 -8.9 -3.15161 | opp_overlap 1495073 1495074 1495077, overlap 1495077 TAAAAGAAAAAAGAG TAATTTCTC AAAT GAGAAATTA TAATTTGATTTTTAT TERM 1026 1495095 - 1495074 - R 76 -8.9 -3.29406 | opp_overlap 1495074 1495077, overlap 1495073 1495077 TAAAAGAAAAAAGAG TAATTTCTC AAAT GAGAAATTA TAATTTGATTTTTAT Msm_1471 1497189 - 1495093 - | acyl-CoA synthetase TERM 1027 1496164 - 1496184 + g 72 -2.6 -5.41941 | overlap 1496168 GTTTACACTACCTTC TTCAGGAA TACCT TTCCTTAA TTTTTCTTTGGTTTC TERM 1028 1497820 - 1497810 - g 77 -4 -5.32944 | overlap 1497803 1497802 GTCACAACCAAAAAA GTTT TTG AAAC ATACAGGAAAAGAAT Msm_1472 1497558 - 1498478 + | hypothetical protein Msm_1473 1498494 - 1499414 + | beta-lactamase superfamily hydrolase Msm_1474 1500509 - 1499415 - | chorismate synthase Msm_1475 1500583 - 1501293 + | endonuclease III-related protein TERM 1029 1501394 - 1501381 - g 84 -5.3 -5.46276 | opp_overlap 1501381 AAGATATAGAAAAAA CTCTA AAAT TAGAG ATATTGTTCGTGAAA TERM 1030 1501687 - 1501676 - g 77 -4.4 -5.15969 | opp_overlap 1501676 CGTGAACTTAAAAAA CAGA CTGA TCTG GTTGTTATTGGTGAT Msm_1476 1501340 - 1502341 + | delta-aminolevulinic acid dehydratase TERM 1031 1502855 - 1502843 - g 76 -6.3 -4.62622 | opp_overlap 1502843 1502842 TTAAGGACAAATAAA CAAAC CAT GTTTG ATGTTTTAGAGATTT Msm_1477 1502351 - 1503235 + | ATP:dephospho-CoA triphosphoribosyl transferase TERM 1032 1503744 - 1503729 - g 74 -4 -5.13354 | TTGATAAAAAAGAAA CCAACA TAGC TATTGG TTGGCTGGTTCGTAA pheS 1503392 - 1504936 + | phenylalanyl-tRNA synthetase subunit alpha Msm_1479 1504937 - 1505710 + | exodeoxyribonuclease, XthA Msm_1480 1506406 - 1505705 - | HAD superfamily hydrolase Msm_1481 1507128 - 1506445 - | DNA-dependent DNA polymerase family B protein TERM 1033 1506865 - 1506882 + g 91 -7.7 -5.30448 | overlap 1506853 GTTTCCTTCTTTTAG GATGTCC TTTA GGACGTC TTTTTGTGTTTGTTT Msm_1482 1507351 - 1507698 + | hypothetical protein TERM 1034 1507702 - 1507716 + F 73 -4.3 -5.32944 | opp_overlap 1507702, overlap 1507695 1507695 ACTGATTATTAAAAA GGAAA TATTC TTTCC TTTTTTAATTATCCC Msm_1483 1507871 - 1508809 + | multidrug ABC transporter, ATPase component Msm_1484 1508816 - 1509970 + | multidrug ABC transporter, permease component Msm_1485 1509989 - 1510375 + | putative adhesin-like protein Msm_1486 1510594 - 1510971 + | 30S ribosomal protein S8e TERM 1035 1511076 - 1511095 + T 76 -3.6 -5.85244 | opp_overlap 1511079, overlap 1511079 TTAAAAAAAGGAGTT AAAGGAAT TTTT ATTCCTTA TTTTTTCTTTTCATT TERM 1036 1511079 - 1511092 + T 73 -5.3 -4.94109 | opp_overlap 1511079, overlap 1511076 AAAAAAGGAGTTAAA GGAAT TTTT ATTCC TTATTTTTTCTTTTC Msm_1487 1511589 - 1511086 - | hypothetical protein Msm_1488 1512202 - 1511582 - | cobalt ABC transporter, permease component, CbiM TERM 1037 1512558 - 1512585 + H 73 -5 -5.09762 | opp_overlap 1512566 TTTTTTCCATAATTT GTAATAATCATA TTTA TATGGGTATTAC TTTTTATATTAGAAT TERM 1038 1512600 - 1512624 + H 70 -8 -2.99727 | opp_overlap 1512597 1512600, overlap 1512599 1512594 CTTTTTATATTAGAA TCGTATTCAT CTTTC GTGAATACGA GTTTAATTAATTAAA TERM 1039 1513564 - 1513534 - g 74 -9 -3.02434 | opp_overlap 1513560, overlap 1513531 TTTAATAAAATATTA CCCTCCAGTTCAAG AAA CTTTAACTGGCGGA GGATCTCCAGCTGAT TERM 1040 1514620 - 1514638 + G 70 -4.5 -4.75372 | CCATAATCATGTTTG TCCTGGT GTACA ACCTGGA TTTTTCATAACTGAT Msm_1489 1512656 - 1515499 + | formylmethanofuran dehydrogenase subunit E, metal-binding TERM 1041 1515516 - 1515547 + F 95 -10.4 -4.66395 | AATTTTTGTATTTAT GGATTGCATATTAA TTTT TTAGTATGCAATTC TTTTAATATTTTTTT Msm_1490 1515571 - 1516056 + | hypothetical protein TERM 1042 1519132 - 1519118 - g 71 -7.8 -3.52995 | opp_overlap 1519117 1519118 GCAATTATAATAATA TGCCGC AAA GCAGCA GTTATGATGTAGGCA Msm_1491 1516507 - 1519326 + | formylmethanofuran dehydrogenase subunit E, metal-binding TERM 1043 1519336 - 1519382 + F 73 -4.9 -4.96028 | gap 1, opp_overlap 1519343, overlap 1519343 AAATAGGAATTTTTG TATTTAA-GAATTGTATATTAA TTTT TTAGTATGCAATTCTTTTAATA TTCTTTTTTTTACAA TERM 1044 1519343 - 1519374 + F 86 -9 -4.53703 | opp_overlap 1519343, overlap 1519336 AATTTTTGTATTTAA GAATTGTATATTAA TTTT TTAGTATGCAATTC TTTTAATATTCTTTT TERM 1045 1519847 - 1519867 + G 75 -9.7 -2.90615 | opp_overlap 1519851, overlap 1519843 TAATGCGATTATTAT GCAAGAGGG TTT CCCTATTGC TGATTTGGACAGGAT Msm_1492 1519539 - 1520558 + | hydrogenase maturation factor, HypE TERM 1046 1520598 - 1520614 + G 78 -2.2 -5.75599 | overlap 1520599 TTTACAAAAAGGATT GCAGCA TATCT TGCTGA TTTTTTTGTAGTTTC TERM 1047 1520882 - 1520868 - g 72 -7.2 -3.82923 | opp_overlap 1520868 1520867 1520866 1520870 1520874, overlap 1520866 AATTTAACTAAAATA TATTGG TTC CCAATA ATATTTGATTGGGCA Msm_1493 1520571 - 1520975 + | hypothetical protein Msm_1494 1521009 - 1521650 + | hypothetical protein Msm_1495 1522155 - 1521670 - | nuclease Msm_1496 1522880 - 1522197 - | hypothetical protein Msm_1497 1522982 - 1524322 + | coenzyme PQQ synthesis protein TERM 1048 1524559 - 1524575 + G 72 -3.7 -5.15167 | CCTGGCATTTACTGT TCCTTTG CTT CAAAAGA TTTTTATTCCTGATA TERM 1049 1525256 - 1525244 - g 80 -7.7 -4.25458 | opp_overlap 1525243 AAGGTTATGAACAAA TTCCG TAA CGGAA ATATTGAAATTCTGA Msm_1498 1524380 - 1525669 + | helicase Msm_1499 1526473 - 1525670 - | transcriptional regulator Msm_1500 1527951 - 1526530 - | ssDNA exonuclease, RecJ TERM 1050 1526756 - 1526766 + g 76 -5.4 -5.09426 | opp_overlap 1526756, overlap 1526739 TTAGGTTTGCTAAAT CCTA AAA TAGG TTTTTTCCAATTACA Msm_1501 1528217 - 1527948 - | signal recognition particle, subunit SRP19 Msm_1502 1529330 - 1528236 - | UDP-galactopyranose mutase Msm_1503 1530440 - 1529337 - | glycosyl transferase family protein Msm_1504 1531203 - 1530430 - | uroporphyrinogen III synthase, HemD Msm_1505 1531779 - 1531630 - | hypothetical protein Msm_1506 1531945 - 1531769 - | hypothetical protein Msm_1507 1532141 - 1533163 + | glycosyl transferase family protein Msm_1508 1533294 - 1533503 + | hypothetical protein Msm_1509 1533493 - 1533903 + | hypothetical protein TERM 1051 1533888 - 1533906 + T 76 -7.5 -4.11884 | opp_overlap 1533890 AACAGGTTATGAGGA TAGCTAC GGGGA GTAGCTA TTTATACTTATAATT Msm_1510 1534195 - 1533920 - | putative SAM-dependent methyltransferase TERM 1052 1533958 - 1533968 + g 74 -4 -5.30155 | AGTATTTATATCCAG TTTC AGT GAAA TTTTTTAATTCATCA Msm_1511 1534639 - 1534427 - | hypothetical protein Msm_1512 1534820 - 1535860 + | lipopolysaccharide cholinephosphotransferase LicD family protein Msm_1513 1535918 - 1536994 + | aspartate aminotransferase Msm_1514 1536994 - 1538310 + | glycerol-3-phosphate cytidyltransferase, TagD Msm_1515 1539182 - 1538316 - | lipopolysaccharide cholinephosphotransferase LicD family protein Msm_1516 1539301 - 1541139 + | histidinol-phosphate aminotransferase, HisC Msm_1517 1541251 - 1542198 + | ornithine cyclodeaminase Msm_1518 1543111 - 1542731 - | IS element (transposase remnant) Msm_1519 1543254 - 1543117 - | IS element (transposase remnant) Msm_1520 1543417 - 1543217 - | IS element (transposase remnant) Msm_1521 1543750 - 1544130 + | hypothetical protein TERM 1053 1544904 - 1544944 + G 76 -3.3 -5.46629 | overlap 1544911 ATAATGGAAGTAGCT TCAGGGTGTCCGCCAAAAT TAA ATTTTGGTTGACTTGTTGA TTTTTTTAAAATATT Msm_1522 1544430 - 1544936 + | hypothetical protein TERM 1054 1544911 - 1544937 + T 80 -8.8 -4.11105 | overlap 1544904 AAGTAGCTTCAGGGT GTCCGCCAAAAT TAA ATTTTGGTTGAC TTGTTGATTTTTTTA Msm_1523 1546446 - 1544950 - | transposase TERM 1055 1546277 - 1546293 + g 95 -8.7 -5.05606 | overlap 1546277 AGCATTGAATCTACT GGAAGGG AGC CTCTTCC TTTCTTTTTCTTAGG TERM 1056 1546277 - 1546297 + g 91 -8.3 -5.09204 | overlap 1546277 AGCATTGAATCTACT GGAAGGGAG CCT CTTCCTTTC TTTTTCTTAGGCTCT Msm_1524 1546781 - 1547863 + | hypothetical protein Msm_1525 1547908 - 1548648 + | hypothetical protein TERM 1057 1549887 - 1549915 + G 74 -7.6 -3.88899 | gap 1, overlap 1549872 1549885 GGAATATTTGAAATT CCTGCT-TTGATT TTTG AATCAGTAGCAGG TGTTTTGCTGTTTTT Msm_1526 1549482 - 1550144 + | hypothetical protein TERM 1058 1550362 - 1550349 - g 74 -3.9 -5.14965 | ATTGTCATGAAAAAA TATCT GCCG AGATA CACTGATTACGAATT Msm_1527 1550340 - 1551626 + | ATPase Msm_1528 1552161 - 1552508 + | HTH XRE-like family transcriptional regulator TERM 1059 1552824 - 1552845 + G 72 -3.7 -5.14163 | AAATGATTCTGAAGT TGAAGCAGA TTCT TTTGCATCA TTTTTATTAATGACT Msm_1529 1552510 - 1553238 + | putative Zn peptidase Msm_1530 1553231 - 1553767 + | putative nucleic acid-binding protein TERM 1060 1554398 - 1554382 - g 70 -7.3 -3.65902 | opp_overlap 1554382 GGGAGCTGATCCAAA TGCCTAT TTC ACAGGCA GTTTCCTTCAGGCAA Msm_1531 1553999 - 1555495 + | SNF family Na(+)-dependent transporter TERM 1061 1556592 - 1556610 + G 77 -9 -3.26444 | overlap 1556590 1556589 TGATTGGACCCGTAA TAAAACAG TAA CTGTTTTA TGTATTGTTGGAGGA Msm_1532 1555528 - 1557018 + | SNF family Na(+)-dependent transporter Msm_1533 1557745 - 1561203 + | adhesin-like protein TERM 1062 1562727 - 1562713 - g 72 -3.6 -5.20216 | GACATTACTAAAAAA TTCAAT GTA ACTGAA GTTGAAGGCTTAGAT TERM 1063 1563585 - 1563571 - g 72 -3.6 -5.20216 | GACATTACTAAAAAA TTCAAT GTA ACTGAA GTTGAAGGCTTAGAT TERM 1064 1565989 - 1565978 - g 71 -3 -5.14626 | ATCATCAAAATAAAA CATA TAAT TATG GAGATAATGTTGAGT Msm_1534 1561222 - 1569351 + | adhesin-like protein TERM 1065 1569356 - 1569377 + F 78 -2.3 -6.12458 | opp_overlap 1569358, overlap 1569359 GGAAAAAATAAATTT AAGGGATTT TTAT AAATCCTTC TTTTTTCTTTTTTTA TERM 1066 1569359 - 1569374 + F 81 -6.2 -4.97159 | opp_overlap 1569358, overlap 1569356 AAAAATAAATTTAAG GGATTT TTAT AAATCC TTCTTTTTTCTTTTT TERM 1067 1569758 - 1569747 - g 74 -3 -5.47159 | opp_overlap 1569747 GCCCAACATAAAAAA GTAA TGCG TTAC TTTATTGGGGACGTT Msm_1535 1569582 - 1570577 + | dTDP-D-glucose 4,6-dehydratase TERM 1068 1571614 - 1571604 - g 74 -6.8 -4.20516 | CTTGGATTTAATAAA GGAC TTT GTCC AGTAGATGAAGAGTT Msm_1536 1570578 - 1571729 + | pleiotropic regulatory protein DegT (PLP-dependent) Msm_1537 1571734 - 1572564 + | acylneuraminate cytidylyltransferase NeuS Msm_1538 1572561 - 1573958 + | CMP-sialic acid synthetase, NeuA Msm_1539 1573962 - 1575011 + | sialic acid synthase, NeuB TERM 1069 1576003 - 1575993 - g 76 -5.4 -5.08011 | opp_overlap 1575993 AAAAGTCCTAAAAAA GCAT TTT ATGC ATTATGGGAAAAATT Msm_1540 1575057 - 1576022 + | glycerol-3-phosphate dehydrogenase (NAD) TERM 1070 1576401 - 1576417 + T 100 -9.5 -5.16206 | overlap 1576411 1576414 TTGTCTGAAGTTGTA TCTGCTA CTG TAGCAGA TTTTTCTGTTAATTT TERM 1071 1576968 - 1576944 - T 79 -8.7 -3.92485 | opp_overlap 1576946 1576948 ATATGATAAATACAA GAGAATTACTT TTG AAGTAAGTCTC TATGGGAAAATAAAT Msm_1541 1577126 - 1576968 - | hypothetical protein ispD 1577351 - 1578046 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 1072 1578539 - 1578551 + G 72 -3.4 -5.18866 | TTTAATTTGGATTCA TCCA AGGAA TGGA TTTTATTTATTTCAA Msm_1543 1578050 - 1579345 + | hypothetical protein Msm_1544 1580169 - 1579333 - | lipopolysaccharide cholinephosphotransferase TERM 1073 1580030 - 1580015 - G 79 -6.8 -4.67982 | overlap 1580017 TCCCATGGAATAAAA CCGCCA TGTC TGACGG CACCTAATGCACTGC TERM 1074 1580859 - 1580870 + G 70 -4.4 -4.80077 | CCCGGAAGATACTCT GTGT GAAG ACAC TTATTTTTATTTTAA Msm_1545 1580296 - 1581339 + | glycosyl transferase family protein TERM 1075 1581395 - 1581379 - g 84 -5.2 -5.4477 | overlap 1581389 AAATGGGTAAAAAAA CCAAAA AGAAG TTTTGG ACTATGCCAAAAACC TERM 1076 1581790 - 1581779 - g 71 -3 -5.30448 | opp_overlap 1581779 AAAGAAAGATAAAAA GAAA TTTA TTTC TGTTGTAGCTAATGG Msm_1546 1581366 - 1581815 + | hypothetical protein Msm_1547 1581878 - 1582609 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 1077 1582830 - 1582816 - g 70 -7.2 -3.57119 | opp_overlap 1582815 1582818 1582825 TAGACATGTGTGAAA GATTAC TTT GTAATC CTGTAATTCATAATT Msm_1548 1582623 - 1582889 + | phosphoribosylformylglycinamidine (FGAM) synthase, PurS Msm_1549 1582902 - 1583546 + | phosphoribosylformylglycinamidine (FGAM) synthase, PurQ Msm_1550 1583556 - 1584266 + | uroporphyrin-III C-methyltransferase TERM 1078 1585439 - 1585423 - g 79 -8 -4.053 | opp_overlap 1585416 ATTATGTGATACAAA CTCAGG CAGGT CCTGAG ATTGGAGTTGCTGCA Msm_1551 1584276 - 1586057 + | glucosamine--fructose-6-phosphate aminotransferase, GlmS Msm_1552 1586063 - 1586371 + | hypothetical protein TERM 1079 1586389 - 1586418 + TF 80 -7.5 -4.34993 | gap 1, opp_overlap 1586391 AATATGTTTTTGAAT TAGCTA-TTAATTA TAT TAATTAAATAGCTA TTATTTTACTATTTA Msm_1553 1587092 - 1586859 - | hypothetical protein Msm_1554 1587091 - 1588929 + | putative adhesin-like protein Msm_1555 1590137 - 1588914 - | SAM-dependent methyltransferase TERM 1080 1590600 - 1590622 + G 82 -5 -5.43553 | opp_overlap 1590601 1590604, overlap 1590601 TCATCTGTTCCTAGA AGAATTAAAA GGG TTTTAATTCC TTTTATTTTTTGGCT TERM 1081 1590601 - 1590621 + G 79 -8.5 -3.83692 | opp_overlap 1590601 1590604, overlap 1590600 CATCTGTTCCTAGAA GAATTAAAA GGG TTTTAATTC CTTTTATTTTTTGGC TERM 1082 1590621 - 1590601 - g 74 -8.5 -3.28924 | opp_overlap 1590601 1590600, overlap 1590604 CATCTGTTCCTAGAA GAATTAAAA GGG TTTTAATTC CTTTTATTTTTTGGC TERM 1083 1590882 - 1590892 + G 81 -4 -5.60689 | TCCTTTGTAGGATTT TCAA ATG TTGA TTTTTTATTATATGA Msm_1556 1590348 - 1591406 + | hypothetical protein TERM 1084 1592666 - 1592656 - g 73 -8.2 -3.38683 | ATATTCAAAAGCTAA GGGC AAT GCCC AGAAAACGTGATTTG Msm_1557 1591509 - 1593488 + | 7-cyano-7-deazaguanine tRNA-ribosyltransferase Msm_1558 1593504 - 1594166 + | SAM-dependent methyltransferase, UbiE family TERM 1085 1594254 - 1594283 + G 75 -8.1 -3.70401 | gap 1, opp_overlap 1594253, overlap 1594252 ATTTGCAAATATGAG CTGGCTGATGATTT CCC AAATCATTA-CCAG TGTTTGTGCTTTTGT Msm_1559 1594219 - 1595649 + | polysaccharide biosynthesis family protein TERM 1086 1595986 - 1596003 + G 71 -5.5 -4.68511 | overlap 1595988 GGCGGTATTTTACCT GGCAGTG GTAT CACTGGC TTTATTTATATTGGG Msm_1560 1595699 - 1597126 + | polysaccharide biosynthesis family protein TERM 1087 1597772 - 1597747 - g 70 -6.1 -4.2828 | overlap 1597748 1597750 CCTTATGCAGTAAAA CCATCTGCAAC TATT GTTGCAGAAGC TATAAATGCTACTCC TERM 1088 1597771 - 1597748 - g 76 -9.6 -3.16647 | overlap 1597747 1597750 CTTATGCAGTAAAAC CATCTGCAAC TATT GTTGCAGAAG CTATAAATGCTACTC TERM 1089 1597769 - 1597750 - g 84 -10.8 -3.14218 | overlap 1597748 1597747 TATGCAGTAAAACCA TCTGCAAC TATT GTTGCAGA AGCTATAAATGCTAC Msm_1561 1597486 - 1598523 + | hypothetical protein Msm_1562 1598532 - 1599692 + | acetyl-CoA acetyltransferase Msm_1563 1599767 - 1600033 + | hypothetical protein TERM 1090 1600014 - 1600048 + F 91 -5.2 -6.23545 | opp_overlap 1600025, overlap 1600015 CTATGACTTTTGACA TTGAAATTGAATCAAT CTA ATAGATTTAATTTCAC TTTTTTTTATTTAAA TERM 1091 1600015 - 1600047 + F 81 -8.7 -4.31687 | opp_overlap 1600025, overlap 1600014 TATGACTTTTGACAT TGAAATTGAATCAAT CTA ATAGATTTAATTTCA CTTTTTTTTATTTAA TERM 1092 1600060 - 1600083 + F 71 -6.9 -3.88603 | opp_overlap 1600065, overlap 1600065 TCACTTTTTTTTATT TAAAAGAGA CTCATT TCTCTTTTA TTGATTTTTATGGAT Msm_1564 1600093 - 1600824 + | SAM-dependent methyltransferase Msm_1565 1602379 - 1600799 - | cobyric acid synthase Msm_1566 1603639 - 1602422 - | putative transposase TERM 1093 1602892 - 1602904 + g 80 -7.7 -4.26188 | overlap 1602880 ATTTATCGATGGCTT CACGA TAT TCGTG TTTTAAGTCTGTGCC TERM 1094 1603211 - 1603233 + g 100 -13.6 -3.86684 | opp_overlap 1603205 TAAATCAAATCGTAT TTTATGGAGC CCT GCTCCATAAA TTTGATATAAATTCT TERM 1095 1603597 - 1603618 + g 71 -3 -5.14626 | overlap 1603598 1603613 GTTTAAATTGTTTTG ACTCCATA AATTCA TATGGAGC TTTTATTTTGATACT TERM 1096 1603865 - 1603829 - H 100 -6.4 -5.89947 | gap 1, opp_overlap 1603820 1603829 1603834 1603839 TAAATGTAAAAAAAA TTTTATTAAATATAAAA TATA TTTTA-ATTTAATAAAA AGGTTGATTATTTAT TERM 1097 1606386 - 1606372 - g 72 -2.8 -5.47159 | opp_overlap 1606373 GGCAATAAAGAAAAA TCCTCA TCA TTAGGA GAGGTATTTTCAACT TERM 1098 1608379 - 1608363 - g 86 -7.3 -4.75472 | overlap 1608375 TTTAGATGAAGAAAA CAGTGCA TTA TACACTG TTGGCAGTGATGGAA Msm_1567 1603879 - 1610460 + | adhesin-like protein TERM 1099 1610456 - 1610484 + T 74 -3.3 -5.89659 | overlap 1610457 1610458 CTATAAAAATTAGTC CTTAAGAGAAT TTCTCTT ATTCTCTTAAC TTTTTCTTTTTTTAT TERM 1100 1610457 - 1610483 + T 71 -6.8 -4.08305 | overlap 1610456 1610458 TATAAAAATTAGTCC TTAAGAGAAT TTCTCTT ATTCTCTTAA CTTTTTCTTTTTTTA TERM 1101 1610458 - 1610474 + T 74 -8.1 -3.76383 | overlap 1610457 1610456 ATAAAAATTAGTCCT TAAGAGA ATT TCTCTTA TTCTCTTAACTTTTT Msm_1568 1610806 - 1610528 - | putative transcription regulator TERM 1102 1610943 - 1610970 + H 70 -5.1 -4.93296 | CACAAAAATGTTATT TGTAAGTTAAA CATGGT TTTAATTTACA TTTTTATGATGATGG TERM 1103 1612359 - 1612342 - g 72 -8.5 -3.10715 | TGTAGCATCAGGTAA CCTTCAA GTTC TTGAAGG AATGCACATAGCTAT Msm_1569 1611422 - 1613401 + | ATP-dependent protease Lon TERM 1104 1613394 - 1613406 + F 73 -4.1 -5.40014 | TTGAAAAACCAGCTA CTAAC TAA GTTGG TTTTTATTATTCTTT TERM 1105 1613787 - 1613777 - g 76 -5.4 -5.09245 | opp_overlap 1613748 CGAAAATCAGAAAAA GCTT TGA AAGC AATACTATTCATGCA Msm_1570 1613524 - 1614951 + | peptide ligase Msm_1571 1615423 - 1614941 - | hypothetical protein Msm_1572 1616384 - 1615413 - | ADP-ribosylglycohydrolase Msm_1573 1616403 - 1616927 + | GNAT family N-acetyltransferase TERM 1106 1617258 - 1617240 - g 72 -6 -4.41348 | TTTTTCTCAAATAAA TGTTTCAG CAT CTGCAACA ACAATGATTTTGGCA Msm_1574 1616914 - 1617462 + | nitroreductase, NfnB Msm_1575 1617469 - 1617837 + | hypothetical protein TERM 1107 1617852 - 1617874 + T 100 -10.8 -5.89947 | overlap 1617860 AAAAAAGAGTTTTTA GTATTGTTTT TAA AAAACAATAC TTTTTTTTAAATTTA Msm_1576 1618378 - 1617887 - | hypothetical protein TERM 1108 1618949 - 1618967 + G 74 -8.9 -3.12521 | opp_overlap 1618963, overlap 1618948 AAAACCTTTAATTGT TGCTCCT GATAA AGGAGCA TATCCTTTTGCTCAG Msm_1577 1618467 - 1619363 + | ribose-phosphate pyrophosphokinase Msm_1578 1619366 - 1619665 + | hypothetical protein Msm_1579 1619672 - 1621639 + | excinuclease ABC subunit B Msm_1580 1622588 - 1622157 - | hypothetical protein TERM 1109 1622837 - 1622847 + H 70 -4 -5.27023 | AATATTTGTTTGATA CATT ACG AATG TTTTATTTTTCAAAT Msm_1581 1622921 - 1625812 + | excinuclease ABC, subunit A, UvrA Msm_1582 1625953 - 1626771 + | hypothetical protein TERM 1110 1626768 - 1626754 - f 74 -7.2 -4.08485 | opp_overlap 1626752 1626754 GTTATGGAAACTAAA TTCGAT TAT ATCGAA TGATTTTTCCTCTTT Msm_1583 1626826 - 1629417 + | helicase Msm_1584 1629795 - 1629391 - | excinuclease ABC subunit C TERM 1111 1632266 - 1632254 - g 73 -7.7 -3.65522 | opp_overlap 1632251 1632254 GATTTACTTTAATAA CTTCC AAA GGAAG TAATTCTTTAGATTC Msm_1585 1629940 - 1633728 + | adhesin-like protein Msm_1586 1633725 - 1639220 + | adhesin-like protein TERM 1112 1639623 - 1639607 - g 80 -5.9 -5.09426 | overlap 1639609 TTTAACTTTAAAAAA CATTAGC TTT GCTAATA CAAATTATTTAAATG TERM 1113 1639621 - 1639609 - g 70 -6.3 -4.17355 | overlap 1639607 TAACTTTAAAAAACA TTAGC TTT GCTAA TACAAATTATTTAAA Msm_1587 1639221 - 1644329 + | adhesin-like protein TERM 1114 1644330 - 1644350 + F 90 -8.5 -4.92655 | opp_overlap 1644323 1644330, overlap 1644326 GTGACAAGTCATTAA TTTATTCAT TTA ATGAATAAA TTTCTTATTTTTTTT TERM 1115 1644350 - 1644330 - f 74 -8.5 -3.23711 | opp_overlap 1644330 1644326, overlap 1644323 GTGACAAGTCATTAA TTTATTCAT TTA ATGAATAAA TTTCTTATTTTTTTT Msm_1588 1644471 - 1644953 + | transposase Msm_1589 1645287 - 1645748 + | RNaseH-like family transposase TERM 1116 1645906 - 1645928 + G 74 -7.2 -4.05991 | overlap 1645909 TGAAAAATAAATTTG CAATATTAAT TTT GTTAATATTG TTTATGGTATCTATT TERM 1117 1647926 - 1647939 + G 71 -5.3 -4.67038 | AGGTGGAGCTATTTA CCATA ATGC TATGG TTTTAGTTTTAAAAA Msm_1590 1645869 - 1651523 + | adhesin-like protein TERM 1118 1651521 - 1651545 + F 82 -2.9 -6.28401 | opp_overlap 1651525, overlap 1651522 1651525 ATAAAAATCAGTCCT TAAAGAGAATT CCC AATTCTCTTAC TTTTTTTCTTTTTTA TERM 1119 1651522 - 1651544 + F 73 -6.4 -4.3155 | opp_overlap 1651525, overlap 1651521 1651525 TAAAAATCAGTCCTT AAAGAGAATT CCC AATTCTCTTA CTTTTTTTCTTTTTT TERM 1120 1651541 - 1651525 - f 72 -8.1 -3.56836 | opp_overlap 1651522 1651521 1651525 AAATCAGTCCTTAAA GAGAATT CCC AATTCTC TTACTTTTTTTCTTT TERM 1121 1651525 - 1651541 + F 77 -8.1 -4.14454 | opp_overlap 1651525, overlap 1651522 1651521 AAATCAGTCCTTAAA GAGAATT CCC AATTCTC TTACTTTTTTTCTTT Msm_1591 1651732 - 1652145 + | hypothetical protein Msm_1592 1653208 - 1652132 - | polysaccharide/polyol phosphate ABC transporter, ATPase component TERM 1122 1652944 - 1652959 + g 70 -6.2 -4.287 | opp_overlap 1652943 GTGAAACTAGATTAT CAACAT CCTG ATGTTG TTTTGCAGTTTCTTT Msm_1593 1653998 - 1653219 - | polysaccharide/polyol phosphate ABC transporter, permease component Msm_1594 1654077 - 1657658 + | glycosyltransferase/CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase Msm_1595 1657676 - 1658716 + | SAM-dependent methyltransferase Msm_1596 1659965 - 1658760 - | putative transposase TERM 1123 1660119 - 1660094 - H 70 -4.1 -5.14819 | AAATTAAAAAACAAA TAAGCCTATAA AATT TTACAGACTCA ATTAATGGAGTAGTG Msm_1597 1660374 - 1660520 + | hypothetical protein Msm_1598 1660922 - 1661521 + | SAM-dependent methyltransferase Msm_1599 1661526 - 1662131 + | SAM-dependent methyltransferase TERM 1124 1662231 - 1662252 + G 74 -5.3 -4.92812 | TTGTTAATTCCAATG TTACTTTTA GAGG TAAAGGTAA TTTATTTTATTGTGA Msm_1600 1662146 - 1662958 + | acetyltransferase Msm_1601 1663476 - 1662976 - | hypothetical protein TERM 1125 1665637 - 1665655 + G 82 -9.6 -3.71527 | opp_overlap 1665637 AAGAAATTGTAATTA TGCCTTCT TGG AGGAGGCA TTTCCATCATTCAAC Msm_1602 1663626 - 1666193 + | glycosyltransferase/CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase Msm_1603 1666416 - 1666721 + | hypothetical protein TERM 1126 1667542 - 1667530 - g 80 -6.3 -4.8622 | CCTTTGAAGGAAAAA CCTAT GAT ATAGG AAATCGTTTAGAATG Msm_1604 1666797 - 1667648 + | UDP-glucose pyrophosphorylase, GalU Msm_1605 1667778 - 1667978 + | hypothetical protein TERM 1127 1668259 - 1668230 - T 87 -3.7 -6.34616 | TTAAAATAAAAAAAA TATTATGGTTTCA TCAT CAAATCCATAATA CTGAAAGCTTCATTT Msm_1606 1669362 - 1668232 - | arylsulfatase regulator, AslB TERM 1128 1668261 - 1668271 + g 77 -4 -5.45813 | opp_overlap 1668261 TCAAATCCATAATAC TGAA AGC TTCA TTTTCTTTTTTAATG Msm_1607 1669573 - 1669364 - | hypothetical protein Msm_1608 1670812 - 1669598 - | aldo/keto reductase family oxidoreductase Msm_1609 1671127 - 1671930 + | molybdate ABC transporter, substrate-binding component, ModA TERM 1129 1672140 - 1672161 + G 71 -2.9 -5.28561 | overlap 1672143 ACTTCCAATTGTATT GCCTCCTAC TGTT GTAGGATTC TTTTTATTGTATATT TERM 1130 1672143 - 1672158 + G 82 -7.6 -4.69868 | overlap 1672140 TCCAATTGTATTGCC TCCTAC TGTT GTAGGA TTCTTTTTATTGTAT Msm_1610 1671979 - 1672653 + | molybdate ABC transporter, permease component, ModC Msm_1611 1672669 - 1673652 + | molybdate ABC transporter, ATPase component Msm_1612 1673950 - 1674846 + | UDP-glucose 6-dehydrogenase Msm_1613 1674801 - 1675253 + | UDP-glucose/GDP-mannose dehydrogenase TERM 1131 1675247 - 1675265 + F 75 -9 -3.0246 | opp_overlap 1675246 GCTATATCAAATAGG TTGCTAAA ACT TTTAGCAA TATCTAAATTTTATT TERM 1132 1676247 - 1676225 - g 89 -7.8 -5.06103 | opp_overlap 1676229, overlap 1676214 ATAATGCTTAAAAAA GCAATAAGTA GGG TGCTTATTGC TGATAACGATAATAA Msm_1614 1675439 - 1676341 + | transcriptional regulator Msm_1615 1676363 - 1677277 + | deoxyhypusine synthase, Dys Msm_1616 1677300 - 1677845 + | hypothetical protein TERM 1133 1677843 - 1677869 + T 70 -4.7 -5.00616 | gap 1, opp_overlap 1677842 1677849, overlap 1677842 1677849 AAAAAAAGTAGAATT TAA-AAAGGATT TTTT AATCCTTTATTA TTTTTTCACAGGCCA TERM 1134 1677862 - 1677849 - T 70 -5.3 -4.78752 | opp_overlap 1677842 1677849 1677843, overlap 1677842 AGTAGAATTTAAAAA GGATT TTTT AATCC TTTATTATTTTTTCA TERM 1135 1677849 - 1677862 + T 70 -5.3 -4.84182 | opp_overlap 1677842 1677849, overlap 1677842 1677843 AGTAGAATTTAAAAA GGATT TTTT AATCC TTTATTATTTTTTCA Msm_1617 1678497 - 1677856 - | orotidine-5'-phosphate decarboxylase, PyrF TERM 1136 1679052 - 1679066 + G 81 -10 -3.16564 | overlap 1679051 CAGTATTATTTGGAC CTGCAG TTA CTGCAG TGTTAGCTTCAATTG Msm_1618 1678808 - 1679473 + | cobalt transport protein CbiM Msm_1619 1679483 - 1679773 + | cobalt transport protein CbiN TERM 1137 1679780 - 1679765 - f 73 -4.7 -5.15969 | opp_overlap 1679765 GGCCAATCTAAAAAA GAGGA TTAATT TCCTC ATTTTATTTTTTTTT Msm_1620 1679806 - 1680504 + | cobalt ABC transporter, permease component, CbiQ TERM 1138 1680731 - 1680717 - g 83 -4.3 -5.59534 | AAGTATAACAAAAAA GCATT AATTA AATGC AGGCAGAAAGTAGGA Msm_1621 1680504 - 1681340 + | cobalt transporter ATP-binding subunit Msm_1622 1681389 - 1681847 + | riboflavin synthase Msm_1623 1681861 - 1682583 + | glycosyltransferase/dolichyl-phosphate mannose synthase Msm_1624 1682598 - 1682945 + | hypothetical protein Msm_1625 1683065 - 1683724 + | thiol:fumarate reductase, subunit B, TfrB Msm_1626 1683724 - 1684917 + | fumarate reductase Msm_1627 1685825 - 1684914 - | glycosyl transferase family protein TERM 1139 1685449 - 1685459 + g 83 -6.8 -4.79955 | AAAAATGATCTGATT GGAG GTT CTCC TTTTCTTGTGACTCT TERM 1140 1686074 - 1686053 - g 80 -5.9 -5.08824 | opp_overlap 1686053 1686069, overlap 1686054 TGTCGATGTAAAAAA TCCTAAAGA AGGA TCTTTAGGT GCTAATTTCCCTTGG TERM 1141 1686073 - 1686054 - g 82 -9.4 -3.64812 | opp_overlap 1686053 1686069, overlap 1686053 GTCGATGTAAAAAAT CCTAAAGA AGGA TCTTTAGG TGCTAATTTCCCTTG Msm_1628 1685970 - 1686683 + | hypothetical protein TERM 1142 1686991 - 1686969 - g 79 -5 -5.2166 | GAAGAAGTTAAAAAA GTTAAATC AGCTGAA GATTTAAC AATACGTGATGTTAT TERM 1143 1687874 - 1687851 - g 81 -3.8 -5.57729 | overlap 1687853 AAACAATACAAAAAA TACCGTGGAA TGGG TTCCATGGGA GCAATGACCAGTGAG TERM 1144 1687872 - 1687853 - g 74 -6.4 -4.38219 | overlap 1687851 ACAATACAAAAAATA CCGTGGAA TGGG TTCCATGG GAGCAATGACCAGTG Msm_1629 1686702 - 1688183 + | IMP dehydrogenase/GMP reductase, GuaB TERM 1145 1688189 - 1688159 - f 74 -9.2 -2.98145 | opp_overlap 1688159, overlap 1688158 AATTACTAATGAAAG TCCTAATTATCCAA CTC TTGACTAATTAGGA TTTCCTGATTCACAA TERM 1146 1688159 - 1688189 + F 71 -7 -3.84246 | opp_overlap 1688159 1688158 AATTACTAATGAAAG TCCTAATTATCCAA CTC TTGACTAATTAGGA TTTCCTGATTCACAA rpl37ae 1688391 - 1688660 + | 50S ribosomal protein L37Ae Msm_1631 1688664 - 1688795 + | DNA-directed RNA polymerase II, subunit RPC10 Msm_1632 1688847 - 1689329 + | ribosomal biogenesis protein Msm_1633 1689326 - 1689592 + | hypothetical protein Msm_1634 1689655 - 1690005 + | prefoldin, beta subunit TERM 1147 1690011 - 1689997 - f 74 -8.6 -3.3344 | opp_overlap 1689990 ATGCAAGGGTTACAA GGAGAA TAA TTCTCC TATAACATTCTTTTT Msm_1635 1690040 - 1690324 + | hypothetical protein Msm_1636 1690973 - 1691662 + | ProFAR isomerase-related protein Msm_1637 1691681 - 1692076 + | hypothetical protein Msm_1638 1692312 - 1692130 - | hypothetical protein TERM 1148 1692441 - 1692427 - g 72 -7.2 -3.89611 | GAAAATAGAACACAA TCATGA ACA TCATGA AAAAGCTAAAGGTAA Msm_1639 1692410 - 1693309 + | CzcD family heavy metal cation efflux system protein TERM 1149 1694449 - 1694439 - g 74 -4 -5.22104 | opp_overlap 1694439 1694440, overlap 1694440 GAAAAAAGAAGAAAA TTTC AAA GAAA ATGACTTTGAAGATT Msm_1640 1693321 - 1694475 + | DNA intergrase/recombinase Msm_1641 1694545 - 1694820 + | hypothetical protein Msm_1642 1694840 - 1695199 + | hypothetical protein TERM 1150 1695628 - 1695603 - g 74 -9.3 -3.06915 | opp_overlap 1695589 1695602 1695607 1695611, overlap 1695607 ATGTACCTTATGGAA CAAATTTTTAA AACT TTAAAAATTTG AGGTTTTATGGATTT Msm_1643 1695204 - 1695629 + | hypothetical protein Msm_1644 1696003 - 1695671 - | hypothetical protein TERM 1151 1696501 - 1696481 - H 76 -3.4 -5.72118 | overlap 1696483 AAAAAAGATAAAAAA TATTCATT ATAAA AATGAACA ATAACCTAACAGTTC TERM 1152 1696947 - 1696969 + G 100 -15 -3.68936 | opp_overlap 1696947 AACTGTTAATCCAAA CGATTCCACT ATT AGTGGAATCG TTATTAAAATTAATC TERM 1153 1696969 - 1696947 - g 100 -15 -3.75897 | opp_overlap 1696947 AACTGTTAATCCAAA CGATTCCACT ATT AGTGGAATCG TTATTAAAATTAATC Msm_1645 1696729 - 1697160 + | virulence protein TERM 1154 1697993 - 1698007 + G 72 -5 -4.91852 | AAGATGGATATAATT CTATAG AAC CTATGG TTTATTTTTCATGGG Msm_1646 1697221 - 1698444 + | ATPase Msm_1647 1698796 - 1698623 - | hypothetical protein TERM 1155 1698873 - 1698845 - H 95 -13.5 -2.78384 | opp_overlap 1698824 1698840 1698840 1698849 1698860, overlap 1698824 1698847 1698849 CTGTTTTGCAGTATA TATATTTACCTTT AAT AAAGGTAAATATA ATAACCTTTATATAG TERM 1156 1698871 - 1698847 - H 86 -11.7 -2.94099 | opp_overlap 1698840 1698840 1698849 1698860, overlap 1698845 1698849 GTTTTGCAGTATATA TATTTACCTTT AAT AAAGGTAAATA TAATAACCTTTATAT TERM 1157 1698869 - 1698849 - H 80 -9.9 -3.02471 | opp_overlap 1698840 1698840 1698849 1698860, overlap 1698847 1698845 TTTGCAGTATATATA TTTACCTTT AAT AAAGGTAAA TATAATAACCTTTAT TERM 1158 1698849 - 1698869 + H 79 -9.9 -2.82234 | opp_overlap 1698849 1698847 1698845, overlap 1698840 1698840 1698860 TTTGCAGTATATATA TTTACCTTT AAT AAAGGTAAA TATAATAACCTTTAT TERM 1159 1698940 - 1698923 - H 95 -6.3 -5.64873 | TTGAAGAAGAAAAAA TCAGAGC GGCA ACTCTGA AGAAGATCTTCTAAA Msm_1648 1698975 - 1699118 + | hypothetical protein Msm_1649 1699115 - 1699339 + | hypothetical protein Msm_1650 1699340 - 1699615 + | hypothetical protein Msm_1651 1699612 - 1699791 + | hypothetical protein Msm_1652 1699788 - 1700087 + | hypothetical protein Msm_1653 1700087 - 1700404 + | hypothetical protein TERM 1160 1700470 - 1700444 - g 77 -8.9 -3.31175 | gap 1, overlap 1700443 TATATATCAGAAAAT TGCAGGA-ATTC AAAA GAATCTCCTGCA TAAAAAATTACCTAA TERM 1161 1700951 - 1700914 - g 70 -7.3 -3.60805 | gap 1, opp_overlap 1700908 1700917, overlap 1700917 1700944 ACAGTTCACTGGAAA TAACTCCA-TCTATGATT AAT ACTCATAGAATGAAGTTA TTCAAAGATGGTGAA Msm_1654 1700424 - 1701035 + | Gp40-related protein Msm_1655 1701038 - 1701232 + | hypothetical protein Msm_1656 1701229 - 1701483 + | hypothetical protein Msm_1657 1701480 - 1701899 + | hypothetical protein TERM 1162 1701902 - 1701921 + F 82 -8 -4.56597 | opp_overlap 1701901 GGTGATAAAATGATT TGTAAACA TTTA TGTTTACA TTTTTCCGAAGAACC TERM 1163 1701985 - 1701946 - f 100 -13 -3.75015 | opp_overlap 1701949 1701960, overlap 1701949 AGAACCTGTAGGAAA CCACGTACGTGCACGTAC GTAC GTACGTATACGTACGTAA TTCACTATAAATATT TERM 1164 1701949 - 1701982 + F 100 -14.7 -2.7736 | opp_overlap 1701946 1701949, overlap 1701960 ACCTGTAGGAAACCA CGTACGTGCACGTAC GTAC GTACGTATACGTACG TAATTCACTATAAAT TERM 1165 1701982 - 1701949 - f 100 -14.7 -2.96873 | opp_overlap 1701949 1701960, overlap 1701946 ACCTGTAGGAAACCA CGTACGTGCACGTAC GTAC GTACGTATACGTACG TAATTCACTATAAAT TERM 1166 1701960 - 1701985 + F 75 -9.1 -3.14294 | opp_overlap 1701949 1701946, overlap 1701949 ACCACGTACGTGCAC GTACGTACGTA CGTA TACGTACGTAA TTCACTATAAATATT TERM 1167 1702009 - 1702028 + F 100 -8 -5.40072 | opp_overlap 1702009 1702008 AAATATTTTTTAAAT TGTAAACA TTTA TGTTTACA TTTTTTTAAGGAGAG TERM 1168 1702224 - 1702204 - g 87 -7.7 -4.80882 | opp_overlap 1702203 1702204 1702206 ACTCGACATCAAAAA GATTCCTTT GTG AAAAGAATC ATTTGTGAAGATCAT Msm_1658 1702051 - 1702296 + | hypothetical protein Msm_1659 1702293 - 1702466 + | hypothetical protein Msm_1660 1702463 - 1702648 + | hypothetical protein Msm_1661 1702654 - 1702995 + | hypothetical protein Msm_1662 1703009 - 1703155 + | hypothetical protein Msm_1663 1703327 - 1703590 + | hypothetical protein Msm_1664 1703577 - 1703807 + | hypothetical protein Msm_1665 1703812 - 1704126 + | hypothetical protein Msm_1666 1704123 - 1704467 + | hypothetical protein TERM 1169 1704523 - 1704546 + F 74 -3.4 -5.60993 | gap 1, opp_overlap 1704540 CTATATATTGAAGGG GATAAAAT-AT TTT ATAATTTTATC TTTTTTTATGAAAAA TERM 1170 1704570 - 1704540 - f 80 -9.4 -3.39289 | opp_overlap 1704523 TAAAATATTTTATAA TTTTATCTTTTTTT ATG AAAAAAAAATAAAA GACATTATTATAATT TERM 1171 1704644 - 1704634 - g 71 -5.4 -4.59109 | TACATTTTTTAAAAA CATG AAA CATG CAGAAATAGAGTGTC Msm_1667 1704608 - 1704859 + | hypothetical protein Msm_1668 1705453 - 1705626 + | hypothetical protein Msm_1669 1705616 - 1705915 + | hypothetical protein TERM 1172 1706048 - 1706028 - f 78 -6.3 -4.81306 | overlap 1706032 TTCAACAAAAAAGAA TAAACATTA CAA TAATGTTCA AAAAAAATATAAGGA TERM 1173 1706044 - 1706032 - f 70 -4.9 -4.86216 | overlap 1706028 ACAAAAAAGAATAAA CATTA CAA TAATG TTCAAAAAAAATATA Msm_1670 1706074 - 1706667 + | hypothetical protein Msm_1671 1706664 - 1708022 + | large terminase subunit Msm_1672 1708025 - 1709431 + | bacteriophage capsid portal protein Msm_1673 1709428 - 1711056 + | hypothetical protein Msm_1674 1711113 - 1711439 + | hypothetical protein TERM 1174 1711431 - 1711450 + F 70 -4.4 -4.96276 | opp_overlap 1711403 CCTATGGTCAAAATT GTTGAATA AATT TATTTAAC TTTTCGTTTTTTTCT Msm_1675 1711630 - 1711977 + | putative structural protein (prophage psiM100) Msm_1676 1711980 - 1712594 + | hypothetical protein Msm_1677 1712653 - 1713663 + | putative major capsid protein gp5 (phage psiM2) Msm_1678 1713954 - 1714319 + | hypothetical protein Msm_1679 1714359 - 1714802 + | hypothetical protein Msm_1680 1714799 - 1715260 + | hypothetical protein Msm_1681 1715266 - 1716507 + | hypothetical protein TERM 1175 1716514 - 1716533 + F 71 -8 -3.2827 | opp_overlap 1716514, overlap 1716509 1716504 ACAGATTAAATGAAA TGAGAATA TGAT TATTCTCA TTCAATTACTTTATT TERM 1176 1716533 - 1716514 - f 77 -8 -4.13341 | opp_overlap 1716514 1716509 1716504 ACAGATTAAATGAAA TGAGAATA TGAT TATTCTCA TTCAATTACTTTATT TERM 1177 1716576 - 1716566 - f 79 -2.6 -6.17292 | AAATTCAAAAAAAAA TTAT TAT ATAA AAATGTGATATTTAT Msm_1682 1716590 - 1717024 + | hypothetical protein Msm_1683 1717011 - 1717244 + | hypothetical protein TERM 1178 1718868 - 1718880 + G 74 -6.3 -4.49939 | overlap 1718856 TTCCCGCAATAGCTG CTAGT GCG ACTAG TTTTGTAACTTATAT TERM 1179 1720052 - 1720042 - g 70 -4 -5.03747 | AAATGTTGGAAAAAA CATT GTA AATG GATTCAATACTGCTG Msm_1684 1717244 - 1721725 + | phage-related minor tail protein TERM 1180 1722088 - 1722111 + G 95 -5.4 -6.11229 | gap 1, opp_overlap 1722082 1722078 1722068, overlap 1722082 1722068 1722064 AGAAACATATCTCTC GGAGAATGTTG ATT TAAC-TTCTCC TTTTTTTCTTTTAAT Msm_1685 1721732 - 1722469 + | hypothetical protein TERM 1181 1723549 - 1723539 - g 74 -6.8 -4.21933 | opp_overlap 1723538 1723539, overlap 1723528 TTAACTGTAAAAGAA CCTG TTC CAGG ATTATCAAATAATAT Msm_1686 1722447 - 1725317 + | hypothetical protein TERM 1182 1727019 - 1727005 - g 70 -7.2 -3.73122 | opp_overlap 1727011 CACAATAACCGTAAA CATGAT GCC ATCATG TGGCTGTTGTGCAGG TERM 1183 1727238 - 1727228 - g 74 -4 -5.22039 | GGTAAATGTAAAAAA GTTA AAT TAAC TCCTGGAGAAGCAGA Msm_1687 1725323 - 1727866 + | hypothetical protein TERM 1184 1727906 - 1727893 - g 76 -5.3 -5.08483 | GAAAATGAAAGAAAA GCATT AAAT AATGC ATGTGCAAGATTAAG Msm_1688 1727863 - 1729512 + | hypothetical protein TERM 1185 1729612 - 1729599 - g 70 -8.1 -3.15346 | overlap 1729589 1729588 1729586 1729597 AATACTGGACCAACA GGACC AACA GGTCC TAAAGGTGATAAAGG Msm_1689 1729521 - 1730132 + | putative collagen-like protein B Msm_1690 1730158 - 1730310 + | hypothetical protein Msm_1691 1730303 - 1731121 + | putative PeiW-related protein (phage psiM100) TERM 1186 1731310 - 1731331 + F 82 -9.5 -3.65754 | opp_overlap 1731302 1731299 AATATTATCCCTAAT GGGGGATTA AAAT TAATCCCTC TTTAAAATAATTTAT Msm_1692 1731593 - 1731934 + | hypothetical protein Msm_1693 1733043 - 1733888 + | ribokinase PfkB family TERM 1187 1736832 - 1736820 - g 70 -4.1 -5.00027 | overlap 1736815 1736821 ATTAAAAAGATAAAA CCATG TTT CATGA TGAGTCCTTTATCTG TERM 1188 1737409 - 1737389 - g 84 -5.5 -5.40072 | overlap 1737391 TGTTGCTCAAAAAAA TGCAATTCT TGA AGAATTGGA AATTGAACGTAAAAA TERM 1189 1738741 - 1738728 - g 71 -5.3 -4.68528 | AAATCTAAAAAAGAA GATTC ATTT GAATC TAAAGAAAAAACTTA Msm_1694 1734051 - 1740728 + | helicase TERM 1190 1741282 - 1741294 + G 75 -4.9 -5.04249 | opp_overlap 1741282 AGTACGATGAAATAA TCAAT AAG ATTGA TTTGTTTTTTCAGGG Msm_1695 1740738 - 1742489 + | excinuclease ABC, subunit C, UvrC Msm_1696 1742544 - 1743140 + | hypothetical protein Msm_1697 1743436 - 1743137 - | hypothetical protein TERM 1191 1744100 - 1744088 - g 82 -6.3 -5.07652 | opp_overlap 1744087 TGCCCTAAAACAAAA CAAGA AAT TCTTG ATGCTGTTAAAAAAA Msm_1698 1743524 - 1745230 + | methyl coenzyme M reductase system, component A2-like protein Msm_1699 1745231 - 1745656 + | universal stress protein UspA Msm_1700 1745750 - 1745917 + | ferredoxin TERM 1192 1746111 - 1746095 - g 71 -6.6 -4.0896 | overlap 1746107 AAAGGTCTTGCAAAA CTTGGT ATTGA ACCAAG CCCACGCTGGATTAC Msm_1701 1745930 - 1747111 + | FAD-dependent dehydrogenase Msm_1702 1747121 - 1748089 + | UDP-glucose 4-epimerase TERM 1193 1748933 - 1748919 - g 70 -4.3 -4.92385 | GAGATTTAAATAAAA CTTCA GAAGT TGAAG ATGATTATGATATCT Msm_1703 1748099 - 1748977 + | hypothetical protein TERM 1194 1749644 - 1749625 - g 72 -7.2 -3.90112 | TCTGCCGGAATGAAA CCTTTAGC AATA GCTAAAAG AGGAGATGATTTTAT Msm_1704 1749028 - 1750470 + | glutamine phosphoribosylpyrophosphate amidotransferase, PurF Msm_1705 1750477 - 1751715 + | collagenase peptidase family U32 Msm_1706 1751722 - 1752234 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1195 1752749 - 1752733 - g 77 -3.8 -5.33921 | AAAGGAATTAAAAAA CTTAAA GGAAA TTTAAG CGGAATAATCTGCAA Msm_1707 1752235 - 1753032 + | nitrogenase reductase-like protein Msm_1708 1753246 - 1753362 + | hypothetical protein Msm_1709 1753387 - 1755633 + | adhesin-like protein TERM 1196 1755636 - 1755658 + F 76 -3.5 -5.89659 | opp_overlap 1755628 1755626 1755639, overlap 1755628 1755626 1755639 AATAATATCTTAATT TAAGAGATT TTATT AATCTCTTC TTTTTCTTTTTTTAT TERM 1197 1755639 - 1755655 + F 70 -5.2 -4.8855 | opp_overlap 1755628 1755626 1755639, overlap 1755628 1755626 1755636 AATATCTTAATTTAA GAGATT TTATT AATCTC TTCTTTTTCTTTTTT TERM 1198 1756490 - 1756458 - g 71 -7.9 -3.53444 | TCAGTTTGCTTTAAA TGAATTGGAATCTAA AGG TTATATTCCACTTCA AACTCCGTTTTTTGT Msm_1710 1755913 - 1757190 + | seryl-tRNA synthetase, SerS Msm_1711 1758482 - 1757202 - | hypothetical protein Msm_1712 1758602 - 1759117 + | ferritin TERM 1199 1759114 - 1759142 + T 73 -9.1 -2.60555 | opp_overlap 1759114 1759121, overlap 1759121 1759139 GGCAGATAAGGAAAA TTAAAAAGGTAAA AAA TTTACCTTTTTTA TAAGTTATAGACTTC TERM 1200 1759142 - 1759114 - T 86 -9.1 -4.53034 | opp_overlap 1759114 1759121 1759139, overlap 1759121 GGCAGATAAGGAAAA TTAAAAAGGTAAA AAA TTTACCTTTTTTA TAAGTTATAGACTTC TERM 1201 1759135 - 1759121 - T 87 -7.2 -5.13016 | opp_overlap 1759114 1759121, overlap 1759114 AAGGAAAATTAAAAA GGTAAA AAA TTTACC TTTTTTATAAGTTAT TERM 1202 1759121 - 1759135 + T 93 -7.2 -5.3236 | opp_overlap 1759121 1759114, overlap 1759114 AAGGAAAATTAAAAA GGTAAA AAA TTTACC TTTTTTATAAGTTAT TERM 1203 1759144 - 1759177 + T 79 -6.9 -4.37737 | gap 1, opp_overlap 1759146, overlap 1759139 1759146 ATTTACCTTTTTTAT AAGTTATAG-ACTTCC TCT GGAGGTACTATAACTA TTTCATTTTTAATTA TERM 1204 1759146 - 1759175 + T 84 -9.5 -3.76474 | gap 1, opp_overlap 1759146, overlap 1759139 1759144 TTACCTTTTTTATAA GTTATAG-ACTTCC TCT GGAGGTACTATAAC TATTTCATTTTTAAT Msm_1713 1759577 - 1759140 - | regulatory protein Msm_1714 1760889 - 1759588 - | coenzyme F390 synthetase Msm_1715 1766094 - 1761079 - | magnesium chelatase subunit TERM 1205 1764996 - 1765013 + g 70 -7.1 -3.70007 | overlap 1764992 CATAACTTGGAGCAT TGGTAAA GTAT TTTACCA TTACTTTTAACTGGT Msm_1716 1766441 - 1769464 + | adhesin-like protein TERM 1206 1769471 - 1769494 + F 84 -5.4 -5.44119 | opp_overlap 1769474, overlap 1769474 1769492 GTAGATTAAAATTTA AAAGAGAATT TTAC AATTCTCTTA TTTTTTTAAAATAAA TERM 1207 1769474 - 1769491 + F 82 -7.1 -4.80853 | opp_overlap 1769474, overlap 1769471 GATTAAAATTTAAAA GAGAATT TTAC AATTCTC TTATTTTTTTAAAAT TERM 1208 1769491 - 1769474 - f 79 -7.1 -4.44277 | opp_overlap 1769471 1769474 GATTAAAATTTAAAA GAGAATT TTAC AATTCTC TTATTTTTTTAAAAT TERM 1209 1769959 - 1769969 + G 76 -5.4 -5.04601 | GTTTTAATTGTAGCA CCTA CTG TAGG TTTTTCATTTATGGG TERM 1210 1770152 - 1770174 + G 71 -7.6 -3.54543 | opp_overlap 1770149 1770152 TTGTAATACCAAGTA TTGCCCAAGC AAT GCAGGGGCAA TTTGGCGGAGTAACT TERM 1211 1770192 - 1770206 + G 76 -7.2 -4.30827 | opp_overlap 1770191 TGGCGGAGTAACTAT GATTGA TTC TCAATC TTTAATTTTAATTTT Msm_1717 1769581 - 1770291 + | transporter Msm_1718 1770310 - 1770954 + | biopolymer transport protein Msm_1719 1770959 - 1771297 + | hypothetical protein Msm_1720 1771466 - 1771780 + | DNA-directed RNA polymerase, subunit M, RpoM Msm_1721 1771816 - 1773384 + | voltage gated chloride channel protein/cation TERM 1212 1773854 - 1773868 + G 70 -7.2 -3.68506 | opp_overlap 1773854 TGAAAGCAGATATGA TGAATC TAA GATTCA TTTAGGTAAATATTA Msm_1722 1773387 - 1773884 + | nitroreductase Msm_1723 1773931 - 1774902 + | N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase Msm_1724 1775089 - 1775862 + | hypothetical protein Msm_1725 1775940 - 1776692 + | hypothetical protein TERM 1213 1776668 - 1776696 + F 81 -5.6 -5.23943 | gap 1 TTATTACAGATGTGT TGGTTTATTATAT TCAA ATATA-TAAACCA TTTCTTTTTTTAATC TERM 1214 1777334 - 1777344 + G 74 -5.4 -4.79223 | TTCTGACGGATTGGA CTTC TTT GAAG TTTTTAATGATATCG Msm_1726 1776780 - 1777700 + | hypothetical protein TERM 1215 1777824 - 1777808 - g 74 -2.3 -5.54192 | opp_overlap 1777794 1777808 1777810, overlap 1777810 ATGAAGTTAAAAAAA TTTCATT TCC AATGAGA TTTATTAATTATTGT Msm_1727 1777693 - 1778232 + | multimeric flavodoxin Msm_1728 1778354 - 1778710 + | hypothetical protein Msm_1729 1778776 - 1779525 + | hypothetical protein TERM 1216 1779526 - 1779548 + T 91 -4.9 -6.22691 | opp_overlap 1779527, overlap 1779527 GTAAATATTAATTAA ATGTTATCC AAGTA GGATAACAC TTTTTTTTATTCTTC TERM 1217 1779527 - 1779547 + T 81 -8.4 -4.29954 | opp_overlap 1779527, overlap 1779526 TAAATATTAATTAAA TGTTATCC AAGTA GGATAACA CTTTTTTTTATTCTT TERM 1218 1779547 - 1779527 - T 80 -8.4 -4.02075 | opp_overlap 1779526 1779527 TAAATATTAATTAAA TGTTATCC AAGTA GGATAACA CTTTTTTTTATTCTT Msm_1730 1780370 - 1779555 - | hypothetical protein TERM 1219 1779921 - 1779937 + g 70 -8.1 -3.1506 | overlap 1779924 ATATAATATGATTGC CAATATC AGG GATATTG TTGCTCCGGCAGTTT Msm_1731 1781280 - 1780528 - | short chain dehydrogenase/reductase Msm_1732 1782223 - 1781522 - | hypothetical protein Msm_1733 1782355 - 1782900 + | rubrerythrin TERM 1220 1782895 - 1782917 + T 78 -4.2 -5.80727 | overlap 1782896 AAGGCAGATAATTAT CTCTAGATTT TTA AAATCTGGAC TTTTTTCTTCTTTTT TERM 1221 1782896 - 1782916 + T 76 -7.7 -4.02946 | overlap 1782895 AGGCAGATAATTATC TCTAGATTT TTA AAATCTGGA CTTTTTTCTTCTTTT TERM 1222 1782975 - 1782994 + T 76 -8 -3.93166 | opp_overlap 1782975 1782974 1782977, overlap 1782966 1782985 AAAAAAGTTAAAATT TAGCTATT TGTT AATAGCTA TTAATTTTTTAGCAG Msm_1734 1783676 - 1782978 - | thymidylate synthase, ThyA Msm_1735 1784046 - 1788350 + | adhesin-like protein TERM 1223 1788351 - 1788368 + T 88 -4.2 -6.32976 | opp_overlap 1788351 ATTAAAATTCAATAA GGTTTT TTAAAT AAAACC TTTTTTTCTTTTTTT TERM 1224 1788551 - 1788541 - T 72 -2.6 -5.87996 | TAATTAATAAAAAAA TTTT GAC AAAA AATAAAAAAAAGTTA TERM 1225 1788591 - 1788563 - T 100 -6.1 -6.47325 | overlap 1788564 AAAAAATAAAAAAAA GTTAGAGTTCTTA CAT TATGAACTCTAAA ACCATATAAATGAAT TERM 1226 1788590 - 1788564 - T 87 -9.6 -4.40159 | overlap 1788563 AAAAATAAAAAAAAG TTAGAGTTCTTA CAT TATGAACTCTAA AACCATATAAATGAA Msm_1736 1789973 - 1788573 - | xanthine/uracil/vitamin C permease family permease TERM 1227 1789011 - 1788992 - G 76 -7.2 -4.23892 | gap 1 GTGAAGTACCTAAAA CGGACCCTA TAA TA-GGTCCG AGTGCATCTACACTT TERM 1228 1790693 - 1790675 - g 79 -8.2 -3.98016 | opp_overlap 1790674, overlap 1790673 AGTAGGAATAAAACA TGTCAGCA ATG TACTGACA GATTTAAAAGAACAC Msm_1737 1790535 - 1790813 + | putative transcription regulator Msm_1738 1791294 - 1790824 - | putative adhesin-like protein Msm_1739 1792143 - 1791529 - | hypothetical protein TERM 1229 1793047 - 1793057 + G 70 -4 -5.12172 | overlap 1793015 1793014 AGAGGCTTTAGAATG CTTT GAT AAAG TTTTGTTTATTGATC Msm_1740 1792568 - 1793437 + | O-linked GlcNAc transferase Msm_1741 1794378 - 1793464 - | hypothetical protein TERM 1230 1794151 - 1794161 + g 86 -4 -5.80817 | CTGGTCAATAACACT GTAA TTT TTAC TTTTTTTATATTCAA TERM 1231 1795132 - 1795112 - g 87 -5.5 -5.60993 | opp_overlap 1795116, overlap 1795116 CTCTTGATAAAAAAA CAAATGTTG TTC CAACATTTT ATTTGAAAAGAATTA TERM 1232 1795128 - 1795116 - g 84 -6.3 -5.27709 | opp_overlap 1795116, overlap 1795112 TGATAAAAAAACAAA TGTTG TTC CAACA TTTTATTTGAAAAGA TERM 1233 1795116 - 1795128 + G 80 -6.3 -4.86731 | opp_overlap 1795116 1795112 TGATAAAAAAACAAA TGTTG TTC CAACA TTTTATTTGAAAAGA Msm_1742 1794559 - 1795596 + | integrase phage integrase-like family Msm_1743 1798709 - 1795593 - | type II restriction enzyme, methylase subunit TERM 1234 1795623 - 1795634 + g 70 -4.4 -4.76088 | AAGGTTTATCTTTTT GGTT TTGG AACC TTCTTTTTTAATTTC TERM 1235 1796501 - 1796512 + g 71 -3 -5.27335 | opp_overlap 1796501 TATTAAATTTTACAA TTGA TTTT TCAA TTTTTCTTTCACCAA Msm_1744 1798729 - 1799163 + | type II restriction enzyme, methylase subunit TERM 1236 1800391 - 1800360 - g 71 -5.5 -4.55759 | gap 1, opp_overlap 1800363 1800364, overlap 1800364 1800365 1800383 AAAATGAAGAACAAA TAAAT-GTATTCTT TATTC AAGAATACGATTTA AAAAACCATATTAAA TERM 1237 1800951 - 1800932 - g 88 -6.5 -5.32599 | CATAAAACACAAAAA GCTATTG AACAAG CAATAGC TAACTGTGATAATAT Msm_1745 1799264 - 1801204 + | type II restriction enzyme, methylase subunit TERM 1238 1801637 - 1801627 - g 82 -2.6 -6.02914 | opp_overlap 1801627 CTTAGATAAAAAAAA TATA AAT TATA TATTTGGGTTTTTAA Msm_1746 1801220 - 1802788 + | type II restriction enzyme, methylase subunit Msm_1747 1806309 - 1802791 - | type II restriction enzyme, methylase subunit TERM 1239 1804393 - 1804377 - G 71 -8.1 -3.26473 | TTAAATTATCATCAA TCCAATA TGC TATTGGA CTTCCAGGGATTTTA TERM 1240 1805679 - 1805691 + g 76 -6.3 -4.60255 | CTATTACTTCAACTT GACTT TCA AAGTC TTTTTCAGGAATTGT TERM 1241 1808284 - 1808267 - g 71 -2.1 -5.47159 | gap 1, overlap 1808270 CTTCAAGAGAAAAAA TAAG-AGA TTA TCTCCTTA AAAACTTTTTCAATG TERM 1242 1808280 - 1808270 - g 74 -5.4 -4.80737 | overlap 1808267 CAAGAGAAAAAATAA GAGA TTA TCTC CTTAAAAACTTTTTC TERM 1243 1808468 - 1808449 - g 80 -6.5 -4.89729 | overlap 1808441 CATAAAACTCAAAAA GCTATTG AGCAGG CAATAGC TAACTGTGATAATAT Msm_1748 1806598 - 1808721 + | type II restriction enzyme, methylase subunit Msm_1749 1808795 - 1809388 + | hypothetical protein Msm_1750 1809388 - 1809966 + | hypothetical protein TERM 1244 1812838 - 1812814 - g 71 -2.1 -5.3798 | TAACAATAAGAAAAA CACATTGCAAT TCT ATAACTATGTG TCTGATAATGATGAA Msm_1751 1809971 - 1813555 + | hypothetical protein Msm_1752 1813566 - 1814081 + | restriction endonuclease TERM 1245 1815086 - 1815064 - g 72 -3.5 -5.15682 | AAAACAGAAAGAAAA CTCATTTTT ATTTA AAATATGAG GATAATTATGAAGTT Msm_1753 1814082 - 1816586 + | hypothetical protein Msm_1754 1816599 - 1818647 + | ATP-dependent protease La, Lon Msm_1755 1818868 - 1819917 + | purine/pyrimidine phosphoribosyl transferase TERM 1246 1820139 - 1820159 + G 71 -5.5 -4.7254 | CTGTAGTAAATGATT CTGAAATAA ATG TTATTACAG TTTTTGATAAAGAAT Msm_1756 1819928 - 1820866 + | Smf protein Msm_1757 1821233 - 1821883 + | hypothetical protein TERM 1247 1822119 - 1822138 + G 70 -7.2 -3.59262 | gap 1, overlap 1822123 ATATTTAAATGACGG CAGAGACAG ATA CTGTC-CTG TTTGCGGATGTCCCA Msm_1758 1822048 - 1822293 + | hypothetical protein Msm_1759 1822306 - 1822557 + | hypothetical protein Msm_1760 1822566 - 1823030 + | hypothetical protein TERM 1248 1824667 - 1824657 - g 79 -6.8 -4.70659 | TGCCACAGGCAAAAA GCAG TGC CTGC TTAAAAAGGATGAGG Msm_1761 1823185 - 1825746 + | ATPase involved in DNA repair Msm_1762 1825749 - 1826918 + | hypothetical protein Msm_1763 1826922 - 1827161 + | DNA-directed RNA polymerase, subunit M, RpoM TERM 1249 1827198 - 1827230 + T 81 -5.8 -5.25799 | opp_overlap 1827204, overlap 1827199 TATAAAATGGGTTTA TTAAAATAGAGG TTTTGTTTT CCTCTATTTTAG TTTTTCTATTGTTTT TERM 1250 1827199 - 1827229 + T 70 -7.1 -3.71819 | opp_overlap 1827204, overlap 1827198 ATAAAATGGGTTTAT TAAAATAGAGG TTTTGTTTT CCTCTATTTTA GTTTTTCTATTGTTT Msm_1764 1827434 - 1827222 - | hypothetical protein TERM 1251 1827510 - 1827542 + r 81 -5.8 -5.25799 | opp_overlap 1827510 1827516, overlap 1827511 TATATTGTAAATTTA TTAAAATAGAGG TTTTGTTTT CCTCTATTTTAG TTTTTCTATTGTTTT TERM 1252 1827511 - 1827541 + r 70 -7.1 -3.71819 | opp_overlap 1827510 1827516, overlap 1827510 ATATTGTAAATTTAT TAAAATAGAGG TTTTGTTTT CCTCTATTTTA GTTTTTCTATTGTTT Msm_1765 1828403 - 1827534 - | hypothetical protein Msm_1766 1828585 - 1829364 + | O-linked GlcNAc transferase Msm_1767 1829445 - 1829552 + | hypothetical protein Msm_1768 1829660 - 1830112 + | hypothetical protein Msm_1769 1830162 - 1830494 + | hypothetical protein Msm_1770 1830491 - 1830823 + | hypothetical protein Msm_1771 1832632 - 1830800 - | UvrD/REP family DNA helicase TERM 1253 1831248 - 1831281 + g 76 -3.3 -5.37043 | opp_overlap 1831254 1831264, overlap 1831239 1831257 1831264 TCTTCGGATTTTTTA GAGAGATCTTTTATA AGAT TATAAATCATTTCTC TTTTTTCTATAGGAT Msm_1772 1832751 - 1833548 + | hypothetical protein Msm_1773 1833556 - 1833933 + | hypothetical protein Msm_1774 1834108 - 1834251 + | hypothetical protein Msm_1775 1834256 - 1835173 + | putative topoisomerase IV, subunit A Msm_1776 1835215 - 1836204 + | TPR repeat-containing protein Msm_1777 1836468 - 1836199 - | putative transcription regulator Msm_1778 1836666 - 1837211 + | hypothetical protein TERM 1254 1837611 - 1837625 + G 74 -4.2 -5.1356 | opp_overlap 1837612, overlap 1837612 TATTTAGGAAATGAA ACCATC ATT GATGGA TTTTTCTTAATAAAA TERM 1255 1837612 - 1837624 + G 73 -7.7 -3.67413 | opp_overlap 1837612, overlap 1837611 ATTTAGGAAATGAAA CCATC ATT GATGG ATTTTTCTTAATAAA TERM 1256 1837624 - 1837612 - g 77 -7.7 -4.10953 | opp_overlap 1837611 1837612 ATTTAGGAAATGAAA CCATC ATT GATGG ATTTTTCTTAATAAA Msm_1779 1837224 - 1838156 + | hypothetical protein Msm_1780 1838171 - 1838725 + | hypothetical protein Msm_1781 1838754 - 1839230 + | hypothetical protein Msm_1782 1839408 - 1840097 + | hypothetical protein Msm_1783 1840430 - 1840101 - | hypothetical protein Msm_1784 1840668 - 1840447 - | hypothetical protein Msm_1785 1841570 - 1840668 - | hypothetical protein TERM 1257 1842017 - 1842007 - g 70 -4 -5.05577 | AAATCAAATCAAAAA CATT AGA AATG CTTCCATTATAGAGC Msm_1786 1841810 - 1842331 + | O-linked GlcNAc transferase TERM 1258 1842461 - 1842476 + G 72 -3.3 -5.28831 | opp_overlap 1842461 TGAAAGGCTGAGAAT CATTG TTGCAT CAATG TTTTATTTTATTGAT Msm_1787 1842342 - 1843586 + | O-linked GlcNAc transferase Msm_1788 1843657 - 1844310 + | O-linked GlcNAc transferase TERM 1259 1844292 - 1844318 + F 100 -6.8 -5.85011 | opp_overlap 1844290 1844292 1844297 ACAGTTGATTAAATA TAAAATAGCT CAAAAAT AGCTATTTTA TTTTTTTCATTTTTG Msm_1789 1844496 - 1845935 + | ATPase Msm_1790 1847371 - 1845938 - | ATPase TERM 1260 1848148 - 1848132 - g 78 -2.3 -5.72118 | AAAAAATAGAAAAAA CAAATGA TGA TTATTTG AAACACTTCGGGATT Msm_1791 1847618 - 1848502 + | hypothetical protein Msm_1792 1848721 - 1850133 + | putative nicotinate phosphoribosyltransferase Msm_1793 1850135 - 1850485 + | hypothetical protein Msm_1794 1850496 - 1851323 + | tubulin-like protein Msm_1795 1852755 - 1851535 - | ATPase