TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.451749 %AT, 1503137 nt, 9562 terms. Intergenic: 0.515659 %AT, H2T: 186323 nt, 1447 terms; T2T: 91567 nt, 1473 terms; H2H: 126074 nt, 1926 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|116753325|ref|NC_008553.1| Methanosaeta thermophila PT, complete genome (length 1879471) Mthe_0001 1020 - 100 - | quinolinate synthetase complex, A subunit TERM 1 431 - 442 + g 74 -4.4 -4.7373 | overlap 420 TGGACCAGAAGCTCA GCAT CAGG ATGC TTTTTCCTGGCCTCC TERM 2 1983 - 1996 + r 77 -3.1 -5.31275 | gap 1 ACTTCAGACCTCTCC GCATCG CCT CGA-GC TTTTTTATACTGGAG Mthe_0002 2574 - 1966 - | hypothetical protein Mthe_0003 3631 - 2618 - | RNA 3'-terminal-phosphate cyclase TERM 3 2687 - 2705 + g 70 -5.2 -4.3767 | overlap 2689 CCTGCATCTGAGGAT CCTCTGGG CCG TCCAGATG TTTGTTCTGGTGTGG Mthe_0004 3903 - 3628 - | RNA polymerase, dimerisation Mthe_0005 4471 - 3914 - | exosome complex RNA-binding protein Csl4 Mthe_0006 5105 - 4476 - | methyltransferase small Mthe_0007 6981 - 5227 - | putative ATPase RIL Mthe_0008 7410 - 6991 - | hypothetical protein Mthe_0009 8008 - 8286 + | MoaD family protein TERM 4 8266 - 8282 + F 85 -12.3 -3.43071 | GAGGTGGCTATATTC CCACCTG TGG CAGGTGG TTGATTGATATCAGA Mthe_0010 8287 - 8682 + | molybdopterin biosynthesis MoaE TERM 5 8715 - 8692 - g 70 -8.8 -3.66018 | overlap 8671 GCATGATGGTAATAA CCACAGCTCC TCCC GGAGATGCGG ATAGAATAGCTTATA Mthe_0011 8661 - 8978 + | CutA1 divalent ion tolerance protein Mthe_0012 9232 - 9699 + | hypothetical protein TERM 6 10287 - 10269 - g 100 -8.9 -5.00895 | CTGAGGAGATAAAAA CTCTGGA TGACC TCCAGAG GCTCCCGATGACTAA Mthe_0013 10103 - 11386 + | phenylacetate--CoA ligase Mthe_0014 11419 - 11802 + | phosphoribosylaminoimidazole carboxylase Mthe_0015 11856 - 12287 + | UspA domain-containing protein Mthe_0016 12657 - 13691 + | radical SAM domain-containing protein Mthe_0017 13730 - 14032 + | hypothetical protein TERM 7 14076 - 14088 + T 71 -4.7 -4.59414 | AATTTCTTTCAGTTT GGCGG TTC CCCCC TTTTCATTCTTCTCA Mthe_0018 15562 - 14069 - | radical SAM domain-containing protein TERM 8 14255 - 14287 + g 71 -8.4 -3.91897 | overlap 14234 14258 CCCGACCAGCTCCCA GTGCTCGGGAAGGG CGTTA TCCTTTCCGAGTCC TTTGTAGCTGCCAAG Mthe_0019 15964 - 17475 + | hypothetical protein Mthe_0020 17472 - 17858 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Mthe_0021 18006 - 18992 + | protein of unknown function Met10 Mthe_0022 20974 - 19073 - | glutamyl-tRNA(Gln) amidotransferase subunit E Mthe_0023 21227 - 21000 - | transcription factor leuD 21765 - 22250 + | 3-isopropylmalate dehydratase small subunit Mthe_0025 22247 - 23371 + | 3-isopropylmalate dehydrogenase rpoH 23572 - 23808 + | DNA-directed RNA polymerase subunit H Mthe_0027 23826 - 25316 + | DNA-directed RNA polymerase subunit beta'' TERM 9 25918 - 25907 - g 77 -7.2 -4.36914 | TCGGTTTCGATAAAA GGCC AGCG GGCC AGAACTTCGTCGTGG Mthe_0028 25309 - 27123 + | DNA-directed RNA polymerase subunit B' Mthe_0029 27132 - 29762 + | DNA-directed RNA polymerase subunit alpha TERM 10 30748 - 30731 - g 95 -12.7 -4.10164 | opp_overlap 30729 30727 30722 GTATCAGGAGAGAAA GCGAGCG TCCT CGCTCGC GCTGCCTTTGAGGTC Mthe_0030 29759 - 30913 + | DNA-directed RNA polymerase subunit A'' Mthe_0031 30910 - 31221 + | ribosomal protein L7Ae/L30e/S12e/Gadd45 Mthe_0032 31214 - 31645 + | NusA family protein rps12P 31707 - 32129 + | 30S ribosomal protein S12P Mthe_0034 32134 - 32691 + | 30S ribosomal protein S7P TERM 11 32702 - 32679 - T 74 -9.5 -3.53444 | TGAGCGTGTGGCAAA GGCCGCCAG GTAGAT CTGGCTGCC ACCCTCACGCCATCG Mthe_0035 33515 - 32799 - | formate dehydrogenase family accessory protein FdhD TERM 12 33760 - 33786 + H 81 -12.2 -3.05816 | TTGAGGGAGGTGATG ATGGCGCAGCCT TGG AGGCTGCGCCCG TTCCATGGAGCATGC Mthe_0036 33791 - 34768 + | daunorubicin resistance ABC transporter ATPase subunit Mthe_0037 34770 - 35537 + | ABC-2 type transporter Mthe_0038 35950 - 35534 - | hypothetical protein Mthe_0039 36677 - 37084 + | hypothetical protein Mthe_0040 37127 - 37600 + | hypothetical protein Mthe_0041 37597 - 38292 + | triosephosphate isomerase Mthe_0042 38297 - 38569 + | acylphosphatase Mthe_0043 38588 - 38767 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Mthe_0044 38764 - 39939 + | geranylgeranyl reductase Mthe_0045 40641 - 40177 - | peptidylprolyl isomerase TERM 13 40596 - 40610 + g 70 -10 -3.34398 | opp_overlap 40598, overlap 40594 AAAGCTCAATTACCA CATCCC CCA GGGATG TCTTTAAAAGCACCC TERM 14 41118 - 41131 + H 78 -8.1 -4.36063 | CATTAAAACTGGTCG CCTCC ATAA GGAGG TTTTCGTAATATTAT TERM 15 42510 - 42495 - g 76 -10.4 -3.7511 | opp_overlap 42497, overlap 42473 TGGTGGAGAACACAA CCGCAG AGTC CTGCGG GATCGGCTTCTGGTT Mthe_0046 41252 - 43309 + | carbohydrate-binding and sugar hydrolysis TERM 16 43642 - 43617 - g 72 -11.1 -3.14132 | opp_overlap 43616, overlap 43600 GCCTCCTTCGAGGAA GTCACCCACTG CTAC CAGAGGGCGAC ATGTGATGGGTGGCC Mthe_0047 43314 - 43802 + | AsnC family transcriptional regulator hemA 44469 - 45704 + | glutamyl-tRNA reductase Mthe_0050 45701 - 46654 + | delta-aminolevulinic acid dehydratase TERM 17 47079 - 47046 - f 76 -2.3 -5.24129 | opp_overlap 47078 GGGGTGGAGAAAAAA CAGCATCGGTCGTAT TGTA ATCCTGCCGATCCTG CGAGGTCGCATGCCT Mthe_0051 47213 - 47662 + | hypothetical protein Mthe_0052 47742 - 48332 + | hypothetical protein TERM 18 48396 - 48408 + T 70 -7.7 -3.90048 | overlap 48395 CTCTATATGGTCGTG GATCC GCT GGATC TCTTTTTCAAACAAC Mthe_0053 49045 - 48431 - | hypothetical protein Mthe_0054 49476 - 49204 - | hypothetical protein Mthe_0055 50306 - 49689 - | gas vesicle synthesis GvpLGvpF Mthe_0056 50627 - 50355 - | gas vesicle synthesis family protein Mthe_0057 51002 - 50640 - | hypothetical protein Mthe_0058 52050 - 50995 - | gas vesicle protein GvpN Mthe_0059 52990 - 52091 - | hypothetical protein TERM 19 53045 - 53014 - R 100 -13.1 -4.58303 | overlap 53015 CGAAATATCACAAAA TCAGGAGTTCCTG ATCAGG CAGGAACTCCTGG TGCTGCGGCTATGGC TERM 20 53044 - 53015 - R 100 -16.6 -3.33897 | overlap 53014 GAAATATCACAAAAT CAGGAGTTCCTG ATCAGG CAGGAACTCCTG GTGCTGCGGCTATGG Mthe_0060 53258 - 53028 - | gas vesicle synthesis protein GvpA Mthe_0061 53494 - 53270 - | gas vesicle synthesis protein GvpA Mthe_0062 53730 - 53506 - | gas vesicle synthesis protein GvpA Mthe_0063 53966 - 53742 - | gas vesicle synthesis protein GvpA TERM 21 54097 - 54066 - H 100 -16 -3.96148 | gap 1 GCTTGTCAGTATAAA GGGGAT-GATCGAGC TGG GCCCGATCCATCCCC GCAGGAGGCTCTGGC Mthe_0064 54364 - 54723 + | response regulator receiver protein Mthe_0065 54727 - 55860 + | PAS/PAC sensor signal transduction histidine kinase Mthe_0066 55886 - 56485 + | hypothetical protein Mthe_0067 56694 - 57083 + | PadR-like family transcriptional regulator Mthe_0068 57080 - 57760 + | signal transduction ATPase TERM 22 57890 - 57900 + F 77 -4.6 -4.84761 | overlap 57886 GCACAGGTAATCCTG CGTC ACA GGCG TTTTTCTCAGAATCT Mthe_0069 58024 - 58272 + | hypothetical protein TERM 23 58294 - 58316 + F 75 -10.6 -3.28791 | opp_overlap 58293 58310 GGGATGCTGACCAAC GGCTCTGAGT GCA AATCAGAGCC TTCTGGAGGAGAGCT Mthe_0070 58334 - 58714 + | gas vesicle protein GVPa Mthe_0071 58704 - 59396 + | gas vesicle protein GVPa Mthe_0072 59420 - 59734 + | gas vesicle K TERM 24 60692 - 60666 - g 70 -2.8 -4.7497 | opp_overlap 60691, overlap 60667 60668 60691 GCCAGCGACGAAAAA GCTCTCGGCCAG GCT CTGGACGGAATC GCGGCAGAGCCCGGG Mthe_0073 59721 - 60755 + | gas vesicle synthesis GvpLGvpF Mthe_0074 62692 - 61853 - | hypothetical protein Mthe_0075 63122 - 62703 - | hypothetical protein Mthe_0076 63480 - 63154 - | PRC-barrel domain-containing protein Mthe_0077 65699 - 63480 - | AAA family ATPase, CDC48 subfamily protein Mthe_0078 67762 - 65888 - | peptidyl-arginine deiminase Mthe_0079 68416 - 67781 - | 30S ribosomal protein S3Ae Mthe_0080 69627 - 68755 - | ATP phosphoribosyltransferase TERM 25 69049 - 69061 + g 73 -9.1 -3.84266 | overlap 69057 CTTGGAGGGGTCCGA CCAGC TCT GCTGG TTTGCTATCAGCTCT TERM 26 70313 - 70300 - g 71 -8.1 -3.83927 | opp_overlap 70300, overlap 70292 ATACAAATACGCAAA GCTCG ATGG CGAGC TTGGTGACGATGCGC Mthe_0081 70157 - 70969 + | hypothetical protein Mthe_0082 73314 - 71407 - | beta-lactamase domain-containing protein TERM 27 72004 - 71991 - G 74 -9.5 -3.64703 | TGCCGTCCAGGTAAA CGGGG AACT CCCCG ATCAGGCCCTTCCGT Mthe_0083 73958 - 73335 - | proteasome endopeptidase complex Mthe_0084 74262 - 75470 + | ammonium transporter Mthe_0085 75480 - 75818 + | nitrogen regulatory protein P-II TERM 28 77803 - 77779 - g 70 -7.1 -4.0942 | GATCGACTACACAAA CAGAATGGTGA TAC TCGCCACCCTG CCCGGCAAGGAGAGA Mthe_0086 76187 - 78097 + | acetyl-CoA hydrolase/transferase Mthe_0087 79273 - 78173 - | TPR repeat-containing protein TERM 29 79977 - 79987 + H 71 -8.2 -3.67597 | CTAGCCAGGAGCACT GGCC GGT GGCC TTGTTCCCTAGAAGC Mthe_0088 80258 - 80890 + | hypothetical protein Mthe_0089 81831 - 81214 - | orotate phosphoribosyltransferase Mthe_0090 82277 - 81828 - | hypothetical protein Mthe_0091 82941 - 83873 + | cobalt ABC transporter, inner membrane subunit CbiQ Mthe_0092 83870 - 84718 + | ABC transporter related TERM 30 85259 - 85293 + F 71 -4.9 -4.57569 | overlap 85261 85263 TGCAACTGGCTCTGG AGGGCGATCTCCTGG TAGCT CCGGGAGATCGTGTG TTTTTCAGAACCTCA TERM 31 85261 - 85291 + F 79 -9.7 -3.90316 | overlap 85259 85263 CAACTGGCTCTGGAG GGCGATCTCCTGG TAGCT CCGGGAGATCGTG TGTTTTTCAGAACCT TERM 32 85263 - 85289 + F 93 -14.5 -3.53855 | overlap 85261 85259 ACTGGCTCTGGAGGG CGATCTCCTGG TAGCT CCGGGAGATCG TGTGTTTTTCAGAAC Mthe_0093 85407 - 86447 + | TGS domain-containing protein Mthe_0094 86633 - 87010 + | carboxymuconolactone decarboxylase Mthe_0095 87955 - 87152 - | hypothetical protein Mthe_0096 88998 - 87952 - | AsnC family transcriptional regulator TERM 33 89796 - 89767 - R 86 -8 -4.87803 | gap 1, opp_overlap 89766 89767 89771, overlap 89768 89771 GAGCGTGAAACAAAA CGATTTTCAGGCC GGCCA GGCCTG-AAATCA ATTTAATTTGATAAT TERM 34 89795 - 89768 - R 71 -9.3 -3.51958 | gap 1, opp_overlap 89767 89766 89771, overlap 89767 89771 AGCGTGAAACAAAAC GATTTTCAGGCC GGCCA GGCCTG-AAATC AATTTAATTTGATAA TERM 35 89793 - 89771 - R 78 -12.1 -2.58887 | opp_overlap 89767 89766 89771, overlap 89768 89767 GTGAAACAAAACGAT TTTCAGGCC GGCCA GGCCTGAAA TCAATTTAATTTGAT TERM 36 89771 - 89793 + r 78 -12.1 -2.74078 | opp_overlap 89771 89768 89767, overlap 89767 89766 GTGAAACAAAACGAT TTTCAGGCC GGCCA GGCCTGAAA TCAATTTAATTTGAT Mthe_0097 90270 - 89794 - | hypothetical protein Mthe_0098 91055 - 90267 - | phosphoribosylformylglycinamidine synthase I Mthe_0099 93358 - 91052 - | phosphoribosylformylglycinamidine synthase II TERM 37 93642 - 93625 - R 74 -11.3 -2.86202 | opp_overlap 93625 93633, overlap 93624 93622 CTGATATTAAAATAT GCCGCAT ATGA ATGCGGC TTTCAGTTCATCTGA TERM 38 93625 - 93642 + r 85 -11.3 -3.79787 | opp_overlap 93625 93624 93622, overlap 93633 CTGATATTAAAATAT GCCGCAT ATGA ATGCGGC TTTCAGTTCATCTGA Mthe_0100 94058 - 93645 - | hypothetical protein Mthe_0101 95236 - 94211 - | glycerophosphoryl diester phosphodiesterase Mthe_0102 95322 - 96509 + | Sep-tRNA:Cys-tRNA synthetase Mthe_0103 96790 - 96524 - | hypothetical protein TERM 39 97024 - 97014 - g 74 -2.4 -4.98911 | GATGATAAAAAGAAA GCAC CCA GGGC CGGTCAGGACCGCTT Mthe_0104 96919 - 97308 + | sirohydrochlorin cobaltochelatase Mthe_0105 97314 - 98522 + | Mur ligase middle domain-containing protein Mthe_0106 98528 - 99637 + | hypothetical protein TERM 40 99687 - 99720 + T 71 -10.2 -2.83822 | overlap 99690 GGCGGCTCGATGACT GGAGACCCCCGCTC CATGGC GAGGGGGGGGCTTC TAGTTGTGCGCTGAC Mthe_0107 100117 - 99818 - | hypothetical protein Mthe_0108 101157 - 100270 - | radical SAM domain-containing protein Mthe_0109 101609 - 102991 + | (R)-citramalate synthase Mthe_0110 102988 - 104661 + | acetolactate synthase 3 catalytic subunit TERM 41 104693 - 104721 + G 84 -13.2 -3.01712 | gap 1, opp_overlap 104693 CATCGTCGAGAACAA GCCCGG-GGTCCT CACC AGGATCTCCGGGC TGTTCAGCAGGAGGG TERM 42 104721 - 104693 - g 82 -11 -3.7941 | gap 1, opp_overlap 104693 CATCGTCGAGAACAA GCCCGG-GGTCCT CACC AGGATCTCCGGGC TGTTCAGCAGGAGGG TERM 43 104782 - 104835 + G 83 -12.5 -3.29144 | gap 1, overlap 104813 CCACTGACAATCCCG CCTACTCCAGGATGACGATCTCCGTC GAG GGCGATGAT-GTCGTTCTGGAGCAGG TTGTGAAGCAGCTCA Mthe_0111 104658 - 105155 + | acetolactate synthase, small subunit Mthe_0112 105167 - 106165 + | ketol-acid reductoisomerase Mthe_0115 107835 - 107386 - | hypothetical protein Mthe_0116 108751 - 107828 - | hypothetical protein Mthe_0117 109040 - 109198 + | rubredoxin-type Fe(Cys)4 protein Mthe_0118 109201 - 109719 + | Ferritin, Dps family protein TERM 44 109796 - 109817 + T 100 -7.9 -6.00086 | opp_overlap 109793 109792 109795, overlap 109799 GATGGAAAAAGCCAC GACCCCGCG ATGG TGCGGGATC TTTTTTTTGTCATCT Mthe_0119 110578 - 109832 - | hypothetical protein TERM 45 111164 - 111186 + H 71 -8.5 -3.75169 | gap 1, overlap 111138 TTCGAATCCCATCCC CCGCA-CTCT TTTG AGAGATGCGG TTTGGTGAGATGCTG rps15p 111438 - 111950 + | 30S ribosomal protein S15P TERM 46 113038 - 113027 - g 73 -5.8 -4.44667 | GTTCTGAATAACAAA GACG GCAC CGTC AGGGTCTCTGCGAGA Mthe_0121 111953 - 113236 + | phosphoesterase domain-containing protein Mthe_0122 113233 - 113451 + | hypothetical protein Mthe_0123 113453 - 114955 + | seryl-tRNA synthetase Mthe_0124 115264 - 115890 + | hypothetical protein Mthe_0125 115905 - 116663 + | hypothetical protein TERM 47 116738 - 116754 + F 89 -3.7 -5.60864 | GATCTCCTGTCGCAC TGATAAC GCT GTTTTCA TTTTTTTAGTGTCTC TERM 48 117233 - 117247 + G 70 -10 -3.39449 | AAGTTCTATGCCACT CCTGTC GGG GACAGG TTCGTGTTCATGCCC Mthe_0126 117098 - 117631 + | hypothetical protein Mthe_0127 118834 - 117710 - | hypothetical protein Mthe_0128 119732 - 118923 - | hypothetical protein Mthe_0129 120927 - 119713 - | queuine tRNA-ribosyltransferase TERM 49 119944 - 119962 + g 70 -6.7 -4.11281 | CACGGGCCTCTTGTC GTCCTTG AAAAC CGAGGAC TTTATGCTTATCCTG Mthe_0130 122023 - 121349 - | NADPH-dependent FMN reductase Mthe_0131 122597 - 122034 - | hypothetical protein TERM 50 122468 - 122435 - G 78 -6.7 -4.60041 | gap 1 AGGTATTCTGAAAAA GCGCATCTGCC-GTGC CCA GCACCAGCAGACATGC CAAGAGAAACAGGAC Mthe_0132 122897 - 123367 + | hypothetical protein Mthe_0133 123377 - 124483 + | geranylgeranyl reductase TERM 51 124689 - 124671 - g 70 -6.7 -4.11216 | gap 1 CTGTCATGTTCAAAA GGGC-TGG TGAA CCATGCCC ACATCTCACATTTGC Mthe_0134 124550 - 124852 + | hypothetical protein Mthe_0135 126169 - 124991 - | lysine 2,3-aminomutase YodO family protein TERM 52 126181 - 126198 + H 71 -2.8 -4.99043 | TCATGTTGCACCTCC TTTTGT TTTTGT ACAAAA TTTTATTTGTACAAA Mthe_0136 126609 - 127541 + | NAD-dependent epimerase/dehydratase Mthe_0137 128059 - 127691 - | hypothetical protein TERM 53 127794 - 127850 + g 79 -12.5 -2.89564 | gap 2 TCCGGAACGCACTCA TCGGTGCATCCCGCGCATGG-ATC-GA AGATA TCAGATGCCATGAGCGGGGTGAATCGA TCTGTGCACTCCGGC Mthe_0138 128303 - 128079 - | like-Sm ribonucleoprotein, core Mthe_0139 128597 - 128370 - | NifU domain-containing protein Mthe_0140 129028 - 128603 - | hypothetical protein TERM 54 129110 - 129081 - R 79 -11.5 -3.10343 | opp_overlap 129080 129068 129085, overlap 129085 AGAGCTATTAGTTAA TCAACACAGCGCA CAAA CGTGCTGTGTTGA ATAATTCGAAGCCTT Mthe_0141 129932 - 129390 - | cobalt-precorrin-6Y C(5)-methyltransferase cbiD 131104 - 130070 - | cobalt-precorrin-6A synthase Mthe_0143 131821 - 131192 - | precorrin-8X methylmutase CbiC/CobH Mthe_0144 133238 - 131844 - | uroporphyrin-III C/tetrapyrrole methyltransferase Mthe_0145 133986 - 133222 - | cobalamin biosynthesis protein CbiG Mthe_0146 134825 - 134088 - | precorrin-4 C11-methyltransferase Mthe_0147 135579 - 134971 - | cobalt-precorrin-2 C(20)-methyltransferase Mthe_0148 136095 - 135580 - | precorrin-8W decarboxylase TERM 55 136392 - 136447 + H 71 -9.1 -3.52906 | gap 1, opp_overlap 136384, overlap 136391 136393 GCCCAAATCTCCGGA TTCAGCTCTTATCCGGACAGGTTCGT CCTAC ATGG-CCTGTCCGGATAAGCGAAGAG TATTTGTGGAAGTCG TERM 56 136984 - 136952 - g 74 -3.3 -4.88711 | overlap 136954 136977 136979 ATAACACAGCAAAAA CCCCGGTCTCTCTGG GAT CCAGAAACACCACCG TGAGCACGGTGGATC TERM 57 136996 - 136979 - g 77 -11.3 -3.5511 | overlap 136954 136952 136977 TGGGATCCAGAAACA CCACCGT GAGC ACGGTGG ATCGTGATGCGGAAA TERM 58 137040 - 137016 - g 86 -3.5 -5.42259 | TGATGCGGAAAAAAA CGCAACATCCG GTG CAAATGCCACG ACGGAGGGGAGGCCT Mthe_0149 136744 - 140085 + | S-layer-like domain-containing protein Mthe_0150 141184 - 140297 - | leucine-rich repeat-containing protein TERM 59 140447 - 140427 - G 79 -3.1 -5.14563 | overlap 140430 140432 TCTCTCACCAAAAAA GACCAGTGC CCT GCAAGGGCC TCCAGAGCTTCCACA Mthe_0151 142254 - 141337 - | hypothetical protein TERM 60 142386 - 142364 - R 79 -9.8 -3.80573 | CTTATCAGTATCAAA GCAGTCCGAG GTT CTCGAGCTGC TGCCTCACGATCCTG Mthe_0152 142910 - 142359 - | transcription factor TERM 61 143888 - 143901 + G 74 -6.7 -4.24745 | CCTAAAGCGGGTGGT GCTCT CGAG AGAGC TTTCTGTTGATGATA TERM 62 145075 - 145098 + G 70 -9.6 -3.33361 | AGGCTGACCGGCTCA GGGTATCGGT TTAT GCCGATACTC TTGATGTGATTGATG Mthe_0153 143466 - 145883 + | peptidase U32 TERM 63 146550 - 146523 - g 73 -9.2 -3.8397 | gap 1, opp_overlap 146523 146522 146520 146528 146542 146548 ATACATCCACAACAA CGAGATCGTCCTC AAC GAGGGCGAT-TCG ATATTCTTCGATTCG TERM 64 146528 - 146546 + G 74 -11 -3.24423 | opp_overlap 146523, overlap 146523 146522 146520 146542 TCCACAACAACGAGA TCGTCCTC AAC GAGGGCGA TTCGATATTCTTCGA Mthe_0154 146083 - 146631 + | XRE family transcriptional regulator Mthe_0155 146646 - 148529 + | AMP-dependent synthetase and ligase Mthe_0156 148534 - 149577 + | 2-ketoisovalerate ferredoxin reductase TERM 65 150856 - 150874 + G 71 -10.2 -3.18264 | overlap 150857 TCATGGCCACAGGTC GCCTCGGG CTT CCCGAGGA TTCGTACGTGGGCGC TERM 66 150857 - 150873 + G 78 -13.7 -2.50816 | overlap 150856 CATGGCCACAGGTCG CCTCGGG CTT CCCGAGG ATTCGTACGTGGGCG Mthe_0157 149574 - 150986 + | thiamine pyrophosphate binding domain-containing protein TERM 67 151208 - 151261 + G 71 -7.3 -4.00038 | gap 1, opp_overlap 151189, overlap 151193 151209 CTCGGAAAGGATCCC AGGTTCGTTCAGGCGGTTCTC-GAGG AGT CCTCTGAGATCCTCCTGGACCGCCCG TTTCTCCTGGTCGTC Mthe_0158 150983 - 151717 + | F420-dependent oxidoreductase, putative TERM 68 151788 - 151774 - f 71 -7 -3.99374 | CTCTATCAATAACAA CCCGCC AAG GGAGGG TACATGCGCCGTGAA TERM 69 151862 - 151848 - f 71 -7 -3.97307 | CCTATTCAATAACAA CCCGCC AGG GGAGGG TACATGCGCAGGCTT Mthe_0159 151945 - 152610 + | hypothetical protein Mthe_0160 154519 - 152759 - | molybdenum cofactor synthesis domain-containing protein Mthe_0161 155645 - 154524 - | chorismate synthase Mthe_0162 156070 - 155642 - | ribonuclease H Mthe_0163 156654 - 156067 - | NADPH-dependent FMN reductase TERM 70 156694 - 156675 - R 84 -13.6 -2.71144 | opp_overlap 156689 CACCTCTGTGAACTA CCCTACCC TGAA GGGTAGGG CTTCCCACTTCATCG Mthe_0165 158101 - 157499 - | hypothetical protein Mthe_0166 158643 - 158098 - | GMP synthase subunit A Mthe_0167 158849 - 160366 + | phosphoglyceromutase Mthe_0168 161011 - 160370 - | hypothetical protein TERM 71 161691 - 161676 - g 73 -9 -3.8613 | GGGAAAGATGAAGAA GCGGAT ATGG ATCCGC GAGGGAGATGTCGTA Mthe_0169 161545 - 161817 + | translation initiation factor eIF-1A TERM 72 161864 - 161829 - g 74 -8.3 -3.96387 | overlap 161831 ATGAAGCGAAGGAAA GAGGAAGAGCTCGAC GCGCGT ATCGATCTCTTCCGC AGGCGTATAAAGGAC TERM 73 161862 - 161831 - g 71 -9.5 -3.56675 | overlap 161829 GAAGCGAAGGAAAGA GGAAGAGCTCGAC GCGCGT ATCGATCTCTTCC GCAGGCGTATAAAGG Mthe_0170 161814 - 162611 + | protein of unknown function RIO1 Mthe_0171 162612 - 163136 + | putative RNA-processing protein Mthe_0173 165648 - 164641 - | hydantoinase/oxoprolinase Mthe_0172 163138 - 164694 + | peptidase M50 Mthe_0174 165718 - 166806 + | coenzyme F420 hydrogenase/dehydrogenase beta subunit Mthe_0175 166860 - 168032 + | translation-associated GTPase TERM 74 168121 - 168140 + T 80 -12.2 -2.83249 | overlap 168118 168116 GTGATGCCAGGTTAA GTGGCTAC TGAA GTAGCCAC TGCTCTTATGTCAGA TERM 75 168191 - 168176 - T 79 -11.8 -3.21126 | overlap 168168 168177 AACCAGAGTCAGGAA GCCCCG CCCT CGGGGC AGGGAGGAATATCAC TERM 76 168195 - 168177 - T 84 -13.8 -2.52193 | overlap 168168 168176 ACCAGAGTCAGGAAG CCCCGCCC TCG GGGCAGGG AGGAATATCACGGAT gatB 169659 - 168241 - | aspartyl/glutamyl-tRNA amidotransferase subunit B Mthe_0177 171074 - 169659 - | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 77 170578 - 170566 - G 83 -7.7 -4.57837 | ACAGTGCCGCAAAAA GATGC AGG GCATC TGACAGAACCTCCTG Mthe_0178 171358 - 171077 - | glutamyl-tRNA(Gln) amidotransferase, C subunit Mthe_0179 171809 - 171576 - | hypothetical protein Mthe_0180 172432 - 171806 - | translation initiation factor IF-2 subunit beta rpl10e 172958 - 172446 - | 50S ribosomal protein L10e Mthe_0182 177574 - 173252 - | hypothetical protein TERM 78 176268 - 176246 - G 71 -11.2 -2.90322 | overlap 176245 CCCGACCAGAACAAC GCCAGGGGAG GAA CTCCACCGGC TGCTCAAAAGCACCG Mthe_0183 179133 - 177574 - | hypothetical protein purP 179435 - 180505 + | 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase Mthe_0185 180788 - 181981 + | sugar phosphate isomerase involved in capsule formation-like Mthe_0186 182023 - 182562 + | phosphodiesterase Mthe_0187 182974 - 183240 + | hypothetical protein Mthe_0188 184128 - 183448 - | ribosome biogenesis protein Mthe_0189 185105 - 184368 - | beta-lactamase domain-containing protein Mthe_0190 186379 - 185102 - | ATPase central domain-containing protein TERM 79 186533 - 186523 - R 73 -5.4 -4.50976 | opp_overlap 186518 186516 186515, overlap 186518 CTGCAGATCAGAAAA GCTT CAT AAGC TCCTCTGCTATTATT Mthe_0191 187120 - 186515 - | GDSL family lipase Mthe_0192 187920 - 187117 - | tryptophan synthase, alpha subunit TERM 80 187195 - 187209 + g 84 -5.7 -5.03314 | overlap 187180 CCTGATCAGATCCTC GAGCT GGTCA AGCTC TTTTTTACCAATGAG Mthe_0193 189091 - 187907 - | tryptophan synthase subunit beta Mthe_0194 189600 - 189364 - | hypothetical protein TERM 81 189447 - 189430 - G 74 -2.7 -4.84017 | gap 1 AATTCCGCATAAAAA GCT-TGCC AGC GACACAGC ATTTGACACTATGAG Mthe_0195 190013 - 189663 - | hypothetical protein Mthe_0196 190185 - 191054 + | transposase, IS4 family protein Mthe_0197 191132 - 193519 + | von Willebrand factor, type A TERM 82 193519 - 193539 + F 95 -8.2 -5.25803 | overlap 193520 CATCAGACGTTCATG AGCCGGGA TTGAT TCCCGGCA TTTTTTATCAGCGTT TERM 83 193520 - 193538 + F 85 -11.7 -3.74397 | overlap 193519 ATCAGACGTTCATGA GCCGGGA TTGAT TCCCGGC ATTTTTTATCAGCGT Mthe_0198 194168 - 196756 + | pentapeptide repeat-containing protein Mthe_0199 196843 - 198039 + | hypothetical protein Mthe_0201 200190 - 198736 - | radical SAM domain-containing protein Mthe_0202 201568 - 200204 - | radical SAM domain-containing protein TERM 84 201581 - 201593 + H 74 -9.1 -3.71917 | CATGGTGGCGAGGTC GCCCT TCC AGGGC TTTAACCTTTACGAT Mthe_0203 202121 - 202738 + | metal-binding protein-like Mthe_0204 202836 - 203588 + | hypothetical protein Mthe_0205 203576 - 204532 + | methylenetetrahydromethanopterin reductase Mthe_0206 204529 - 205041 + | nicotinamide-nucleotide adenylyltransferase Mthe_0207 205138 - 206298 + | hypothetical protein Mthe_0208 206299 - 206712 + | hypothetical protein Mthe_0209 207150 - 206854 - | hypothetical protein Mthe_0210 207351 - 207160 - | hypothetical protein Mthe_0211 208312 - 207518 - | glutamate synthase alpha subunit Mthe_0212 209813 - 208320 - | glutamate synthase (NADPH) TERM 85 209209 - 209193 - G 71 -9.5 -3.53811 | GGTATGTTCTTTAAA CTGAGAT CTC ATCTCAG CCGGCATACCCCCCT Mthe_0213 210927 - 209791 - | glutamine amidotransferase, class-II TERM 86 211926 - 211947 + r 72 -5.9 -4.32678 | gap 1, opp_overlap 211915 GCAAGCCAGTTGCTG GATATCC-GC CTG GCAGGATGTC TTCTTTCTTTCCCAC Mthe_0214 212572 - 212264 - | hypothetical protein Mthe_0215 213119 - 212613 - | hypothetical protein TERM 87 213087 - 213097 + g 70 -6.8 -4.18018 | opp_overlap 213081 AATCGAACATCCGAT CCCA GAA TGGG TTTTGGATACACAGA argS 215057 - 213381 - | arginyl-tRNA synthetase Mthe_0217 215433 - 216626 + | hypothetical protein TERM 88 216726 - 216737 + F 72 -5.8 -4.36993 | overlap 216729 GCTGTGAGCGTCGCA TGGG ATGA CCCA TCTTTTTTTGCGGTT TERM 89 216729 - 216739 + F 87 -5.4 -5.48303 | overlap 216726 GTGAGCGTCGCATGG GATG ACC CATC TTTTTTTGCGGTTGT Mthe_0218 216924 - 217679 + | ABC transporter related TERM 90 218193 - 218181 - g 74 -6.9 -4.371 | opp_overlap 218181 GGGATTATATCAAAA GCCCC TCC GAGGC TGATGTCAGCAGGAT egsA 217689 - 218753 + | NAD(P)-dependent glycerol-1-phosphate dehydrogenase TERM 91 218798 - 218784 - gf 82 -5.6 -5.1101 | overlap 218786 TCAGGAGGTAAAAAA TGGCCG AAC CGGCAA CTCAGATCACCCTGA Mthe_0220 218783 - 219232 + | hypothetical protein cofG 219187 - 220167 + | FO synthase subunit 1 TERM 92 220665 - 220635 - T 82 -11.8 -3.40403 | CTCCTCTGATGAGAA TCTCGGGCAATCGC TCA GCGATCGCGCGGGA TCGGTGAGCTAGGAG Mthe_0222 221134 - 220649 - | hypothetical protein Mthe_0223 222952 - 221144 - | ATPase Mthe_0224 223319 - 223855 + | hypothetical protein Mthe_0225 223981 - 224622 + | Zn-dependent hydrolase of the beta-lactamase fold TERM 93 224739 - 224785 + T 80 -12.2 -2.92003 | opp_overlap 224770 224771, overlap 224780 TCGAACTCTATCGTG CCTGGCGGTTTCGGGGTGATGT CGT ACACAACCCTGGAGACGCCGGG TATCTCGCCTGTTAT Mthe_0226 225628 - 224720 - | GMP synthase subunit B TERM 94 225860 - 225828 - H 81 -12.1 -3.03124 | opp_overlap 225830 TGGCATCGGCTAATA TCCGGACAGGTCC GTTCATG GGACCTATCCGAA TGGGATGGAATGCTT Mthe_0227 226111 - 226917 + | MscS mechanosensitive ion channel TERM 95 227922 - 227899 - g 70 -5.2 -4.4195 | overlap 227900 ATAGAGTGGATAAAA GTGGAGGTGC CGGA GCAGCTCCAG AAGATACGTGGCGTG Mthe_0228 227266 - 229515 + | Hef nuclease TERM 96 229539 - 229520 - T 84 -13.6 -2.72558 | opp_overlap 229534, overlap 229509 ACAAGGGGTGAACTA CCCTACCC TGAA GGGTAGGG CTTCCCACTTCATCG Mthe_0229 229642 - 229517 - | hypothetical protein Mthe_0230 231398 - 230007 - | amidophosphoribosyltransferase rpl37e 231605 - 231435 - | 50S ribosomal protein L37e Mthe_0232 231832 - 231617 - | small nuclear ribonucleoprotein Mthe_0233 231920 - 232405 + | PUA domain-containing protein Mthe_0234 232811 - 233110 + | hypothetical protein Mthe_0235 233230 - 233616 + | hypothetical protein TERM 97 233645 - 233605 - T 76 -9 -3.95022 | gap 1, overlap 233606 CTCAGCAAGACCAAA GGGGAT-CTGTGAGGACGC TAGT GCATCCTCTCAGCACCCGC AGATCGCTGTGGCCC TERM 98 233643 - 233606 - T 78 -11.9 -2.96531 | overlap 233605 TCAGCAAGACCAAAG GGGATCTGTGAGGACGC TAGT GCATCCTCTCAGCACCC GCAGATCGCTGTGGC Mthe_0236 234802 - 233867 - | DHH domain-containing protein Mthe_0237 235124 - 235468 + | deoxyribodipyrimidine photolyase-like TERM 99 236214 - 236236 + T 87 -11.2 -4.08216 | CGGAGGCCTGCACGA CCGGCCATTC AAA GAGAGGCCGG TTTTCGGAAACATGA Mthe_0239 237421 - 236318 - | tubulin/FtsZ, GTPase TERM 100 237139 - 237155 + g 77 -8 -4.07568 | overlap 237154 GCTTCTCTATCTCCT CCAGGA TCATC TCCTGG TTTTCCCAGAAGCCC Mthe_0240 238648 - 237500 - | hypothetical protein Mthe_0241 239484 - 238666 - | nicotinate-nucleotide pyrophosphorylase Mthe_0242 239525 - 240334 + | aspartate dehydrogenase Mthe_0243 240345 - 240803 + | hypothetical protein TERM 101 241006 - 240994 - g 71 -7.7 -4.03234 | opp_overlap 240993 240994 CTTCCCCTACACAAA GCCAT GCC ATGGC ACTTTTGTGTTGAAG Mthe_0244 240791 - 241099 + | hypothetical protein Mthe_0245 241242 - 241811 + | flavoprotein Mthe_0246 242289 - 241816 - | hypothetical protein Mthe_0247 243361 - 242387 - | O-sialoglycoprotein endopeptidase Mthe_0248 244910 - 243504 - | phosphoribosylamine--glycine ligase TERM 102 244294 - 244265 - G 72 -11.7 -2.73483 | gap 1, overlap 244290 ACTCGAGCGGAAGTA TGTT-TTTGCCATC CGC GATGGCAAAGAACA TCAGCTCCCTCCCCT Mthe_0249 245076 - 246377 + | glutamine synthetase, type I Mthe_0250 246817 - 246419 - | protein tyrosine phosphatase Mthe_0251 248245 - 247127 - | radical SAM domain-containing protein Mthe_0252 249433 - 248474 - | N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase TERM 103 248802 - 248826 + g 79 -3.3 -5.28414 | TCGCCGGCCACCGGC GCGATCGGAGC CAC GCCCCAGCCGC TTTTTATCTTTGTTA Mthe_0253 250268 - 249567 - | hypothetical protein Mthe_0254 252213 - 250381 - | glycogen debranching enzyme, putative Mthe_0255 253735 - 252248 - | Alpha-amylase ubiA 254316 - 255212 + | prenyltransferase Mthe_0257 255613 - 256047 + | CMP/dCMP deaminase, zinc-binding Mthe_0258 257398 - 256121 - | nucleotidyl transferase Mthe_0259 259657 - 257588 - | MCM family protein Mthe_0260 259976 - 261280 + | phenylacetate--CoA ligase Mthe_0261 261294 - 261728 + | amino acid-binding ACT domain-containing protein rfc 262798 - 261881 - | replication factor C small subunit Mthe_0263 263672 - 263073 - | GPR1/FUN34/yaaH family protein Mthe_0264 264271 - 265098 + | hypothetical protein tfb 266284 - 265271 - | transcription initiation factor IIB TERM 104 266213 - 266227 + g 70 -2.8 -4.75289 | CTCCTTCTCGCGCTG GAGC TTGATGC GCTC TTTTATCTTCTCCTG Mthe_0266 266529 - 266272 - | hypothetical protein Mthe_0267 266619 - 267539 + | nucleolar GTP-binding 1 Mthe_0268 267918 - 267514 - | hypothetical protein TERM 105 268009 - 267989 - R 71 -9.1 -3.56704 | TGGTGATCAAAGCAA TATTGCTCA CAT CGAGCAATA AGAAAGGATTCTCCC Mthe_0269 269580 - 268135 - | hypothetical protein Mthe_0270 270521 - 269889 - | hypothetical protein Mthe_0271 272251 - 270518 - | glycyl-tRNA synthetase Mthe_0272 272731 - 272306 - | hypothetical protein Mthe_0273 273141 - 272860 - | hypothetical protein TERM 106 273365 - 273335 - g 70 -9.7 -3.32844 | gap 1 GGGGTCAGGGCAGAA GGGTCGC-CACAGC CAAT GCAGTGCGCAACCC GAAGCTGGAGGATAT TERM 107 273480 - 273447 - g 74 -8.2 -3.96216 | gap 2 GTGCTATCCAAAGAA CTGGTACGAGCAACCC GGGA GGGT-GCTCGT-CCTG AAGAAGGGCAGCAAA Mthe_0274 273205 - 273546 + | ribonucleoprotein complex SRP, Srp19 component Mthe_0275 273860 - 273543 - | hypothetical protein Mthe_0276 275167 - 274058 - | myo-inositol-1-phosphate synthase Mthe_0277 276233 - 275373 - | hypothetical protein TERM 108 276190 - 276206 + g 74 -7.9 -4.11664 | overlap 276191 TTCTCCTGCGTCTCG AGCGGCA TCG TGCCGCC TTTCGTTCTTATGCC TERM 109 276191 - 276205 + g 72 -11.4 -3.06276 | overlap 276190 TCTCCTGCGTCTCGA GCGGCA TCG TGCCGC CTTTCGTTCTTATGC Mthe_0278 276361 - 276855 + | hypothetical protein Mthe_0279 276920 - 277477 + | putative methylase Mthe_0280 277598 - 278557 + | NAD-dependent epimerase/dehydratase Mthe_0281 278900 - 278664 - | hypothetical protein Mthe_0282 279157 - 280065 + | NOL1/NOP2/sun family RNA methylase Mthe_0283 280058 - 280540 + | hypothetical protein Mthe_0284 280524 - 281600 + | radical SAM domain-containing protein TERM 110 281820 - 281845 + T 71 -8.9 -3.54475 | opp_overlap 281816 281819, overlap 281822 GATCCTCCAAACATG CCTCCAGCAGC TAGT GCTGCAGGATG TTCTATGGTCCCAGC TERM 111 281822 - 281843 + T 75 -10.1 -3.34902 | opp_overlap 281816 281819, overlap 281820 TCCTCCAAACATGCC TCCAGCAGC TAGT GCTGCAGGA TGTTCTATGGTCCCA Mthe_0285 284023 - 282083 - | aconitate hydratase Mthe_0286 284882 - 284484 - | hypothetical protein TERM 112 285120 - 285104 - R 72 -10.1 -3.05624 | overlap 285101 GAATTAAAAACATCA GGGGGCT TCA AACCCCC GGGCTTCACTTCGGC Mthe_0287 286538 - 285126 - | acetyl-CoA decarbonylase/synthase complex subunit gamma Mthe_0288 287902 - 286544 - | acetyl-CoA decarbonylase/synthase complex subunit delta Mthe_0289 288676 - 287915 - | cobyrinic acid a,c-diamide synthase TERM 113 289052 - 289094 + r 91 -11.8 -3.97307 | overlap 289053 289068 AGCAGGTGCGGCAGC CGCGGGGGCTGCAGCAGGAG CGG CCGCTGGTGCAGCCGCCGCC TTCTTCTTCAATACC TERM 114 289053 - 289093 + r 100 -15.3 -2.97902 | overlap 289052 289068 GCAGGTGCGGCAGCC GCGGGGGCTGCAGCAGGAG CGG CCGCTGGTGCAGCCGCCGC CTTCTTCTTCAATAC TERM 115 289068 - 289097 + r 81 -10.7 -3.67597 | gap 1, overlap 289053 289052 GCGGGGGCTGCAGCA GGA-GCGGCCGCTG GTG CAGCCGCCGCCTTC TTCTTCAATACCAGC Mthe_0290 290546 - 289137 - | acetyl-CoA decarbonylase/synthase complex subunit beta Mthe_0291 291145 - 290597 - | acetyl-CoA decarbonylase/synthase complex subunit epsilon Mthe_0292 293568 - 291151 - | acetyl-CoA decarbonylase/synthase complex subunit alpha Mthe_0295 295319 - 296269 + | cobalamin biosynthesis protein CobD TERM 116 296332 - 296303 - T 91 -6.5 -5.18726 | gap 1, overlap 296305 296306 GCGCGATAATAAAAA GAGCGGATCTGCAG CTG CTACAGATCC-CTA CCATCCTGCCCTGAA TERM 117 296330 - 296305 - T 80 -9.1 -4.22377 | gap 1, overlap 296303 296306 GCGATAATAAAAAGA GCGGATCTGCAG CTG CTACAGATCC-C TACCATCCTGCCCTG Mthe_0296 297982 - 296330 - | hypothetical protein Mthe_0297 298565 - 299209 + | hypothetical protein Mthe_0298 300220 - 299429 - | hypothetical protein TERM 118 299877 - 299853 - G 83 -9.9 -4.21827 | TCAAAGACCTGAAAA TCCCGAGGCGC GTA GCTCCTCCGGA GTGCGTACGACCAGT Mthe_0299 301458 - 300226 - | LOR/SDH bifunctional protein TERM 119 301018 - 301032 + g 90 -5.6 -5.23316 | overlap 301020 GCCGGTGGTTCCCAC GACGAC CAT GTCGCC TTTTTTAATATGGTG TERM 120 301514 - 301479 - R 73 -5.5 -4.62302 | gap 2, opp_overlap 301479 301498 CAACAGCTCCAAAAA CTC-CGCTCACC-AGGG CTGA CCCTCGATGACCGCGAG GGTTTTGTCGTTAGT TERM 121 301498 - 301516 + r 80 -7.4 -4.56607 | opp_overlap 301479, overlap 301479 GCTCACCAGGGCTGA CCCTCG ATGACCG CGAGGG TTTTGTCGTTAGTGG Mthe_0300 302606 - 301485 - | ATP dependent DNA ligase Mthe_0301 303481 - 302693 - | CBS domain-containing protein Mthe_0302 304333 - 303485 - | signal transduction protein Mthe_0303 305292 - 304330 - | signal transduction protein Mthe_0304 306078 - 305293 - | signal transduction protein Mthe_0305 306684 - 306127 - | signal-transduction protein Mthe_0306 307373 - 306885 - | molybdenum cofactor synthesis domain-containing protein Mthe_0307 307701 - 307946 + | hypothetical protein Mthe_0308 308366 - 308070 - | hypothetical protein Mthe_0309 310071 - 308539 - | Na+/solute symporter TERM 122 308935 - 308949 + g 91 -3.5 -5.4505 | GCTAACCAGAGTTAT GCTTC TATCC GAGGC TTTTTTGTTGAAGAA TERM 123 309722 - 309702 - G 76 -10.3 -3.64103 | opp_overlap 309713 CAGCCACAGCGGAAA GCCCGCGCA GAC CGCGCTGGC TGTAGAACCTCTGCG Mthe_0310 311295 - 310681 - | CDP-alcohol phosphatidyltransferase Mthe_0311 311803 - 311282 - | hypothetical protein Mthe_0312 312852 - 311794 - | histidinol-phosphate aminotransferase Mthe_0313 313978 - 312836 - | acetylornithine and succinylornithine aminotransferases Mthe_0314 314619 - 313975 - | beta-lactamase domain-containing protein TERM 124 314704 - 314691 - g 74 -8.1 -4.011 | GGAAGATGCAAAGAA CGGGA GGAT TCCCG ATGCGCTCAGGAGTG Mthe_0315 314665 - 315945 + | thiamine biosynthesis protein ThiC Mthe_0316 315923 - 316945 + | hypothetical protein Mthe_0317 318238 - 317030 - | TraB family protein Mthe_0318 319351 - 318239 - | CBS domain-containing protein TERM 125 319467 - 319443 - R 79 -10.7 -3.53722 | opp_overlap 319446 CCCAGAGGTACACAA CGACTCCCGCA GAC TACGGCAGTCG TCTCAAATTGCCTCG Mthe_0319 320295 - 319648 - | N-glycosylase/DNA lyase Mthe_0320 321528 - 320362 - | beta-lactamase domain-containing protein Mthe_0321 321755 - 321525 - | hypothetical protein Mthe_0322 321801 - 323747 + | periplasmic copper-binding TERM 126 323739 - 323774 + T 81 -7.8 -4.4891 | overlap 323741 AGCAACGTCGTGCGG GT-TGTGTAGAGGGCA AGATCC TGCCCTC-ACACATAC TTTTGTCATGCTCAC TERM 127 323741 - 323771 + T 73 -10.6 -3.2043 | gap 1, overlap 323739 CAACGTCGTGCGGGT TGTGTAGAGGGCA AGATCC TGCCCTC-ACACA TACTTTTGTCATGCT TERM 128 324038 - 324007 - T 100 -13.1 -4.35518 | opp_overlap 324004 324002 AAGTTTACAGCAAAA CTGATGGGCTGCA TCATCT TGCAGTCCATCAG GAATCTACTTTTCCA Mthe_0323 325461 - 324043 - | major facilitator transporter TERM 129 324758 - 324736 - G 82 -5.4 -5.03994 | CTCCAGATACAAAAA CAGGACGAGC CCG GCCAGGCCTG CAACTGTCACAAAAC Mthe_0325 326083 - 327411 + | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Mthe_0326 327486 - 327890 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 130 328387 - 328372 - T 78 -7.6 -4.47786 | AACTATTTAAACAAA GATGCA GATC TGCATC GATCCTGCGCGGAAA Mthe_0327 329070 - 328498 - | hypothetical protein Mthe_0328 330354 - 329458 - | cation diffusion facilitator family transporter Mthe_0329 330801 - 330451 - | hypothetical protein Mthe_0330 331132 - 332007 + | hypothetical protein rpl7ae 332114 - 332482 + | 50S ribosomal protein L7Ae rps28e 332493 - 332705 + | 30S ribosomal protein S28e Mthe_0333 332710 - 332880 + | ribosomal protein L24E Mthe_0334 332902 - 333333 + | nucleoside-diphosphate kinase TERM 131 333401 - 333418 + F 71 -6.3 -4.25104 | opp_overlap 333400, overlap 333393 333391 CGGGATGTAGCATAT TTGCTGT ATTT GCAGCAA TTTTGATAACAGCAC Mthe_0335 333533 - 334186 + | hypothetical protein Mthe_0336 335746 - 334685 - | pyruvate carboxyltransferase TERM 132 336345 - 336360 + r 76 -9 -3.85603 | opp_overlap 336333 336344, overlap 336344 ATCGGAACTAACAGT GCCTGA GGGA TCAGGC TATTTATTTGGTGAC Mthe_0337 336844 - 336653 - | hypothetical protein Mthe_0338 337605 - 338168 + | hypothetical protein Mthe_0339 338517 - 339182 + | metallophosphoesterase Mthe_0340 339255 - 339617 + | signal-transduction protein Mthe_0341 340997 - 340083 - | metallophosphoesterase Mthe_0342 341767 - 342570 + | periplasmic binding protein Mthe_0343 342596 - 343465 + | transposase, IS4 family protein Mthe_0344 343537 - 343791 + | periplasmic binding protein TERM 133 344843 - 344815 - g 85 -6.7 -4.91084 | opp_overlap 344818 344842, overlap 344818 CAGGGAATAACAAAA GCATGCATCGTGA CAT CCATGATGCATTC TGGTCCAGGTTCATG Mthe_0345 344466 - 344966 + | hypothetical protein Mthe_0347 345952 - 345269 - | histidine biosynthesis Mthe_0348 345973 - 346677 + | hypothetical protein Mthe_0349 347317 - 346772 - | hypothetical protein Mthe_0350 348393 - 347314 - | radical SAM domain-containing protein Mthe_0351 349295 - 348426 - | polyprenyl synthetase TERM 134 349415 - 349429 + r 73 -7.8 -4.02108 | CATGCCAAGCGCGAT GAGGGC GAA GCTCTC TTTGATTCTGATGCG Mthe_0352 349969 - 349496 - | TspO and MBR like proteins Mthe_0353 350692 - 350327 - | hypothetical protein Mthe_0354 351474 - 350689 - | hypothetical protein Mthe_0355 352510 - 351542 - | GTP cyclohydrolase Mthe_0356 352797 - 352522 - | hypothetical protein Mthe_0357 354292 - 353408 - | permease Mthe_0358 354654 - 354400 - | hypothetical protein TERM 135 354790 - 354766 - H 83 -2.2 -5.65927 | gap 1, opp_overlap 354769, overlap 354768 354769 CAGCTAAATAAAAAA TACGCATCTAC AAAT GTTGATGC-TA ATTACAGATCGACTC Mthe_0359 354917 - 356158 + | peptide chain release factor 1 Mthe_0360 356222 - 356635 + | hypothetical protein Mthe_0361 356632 - 357393 + | xylose isomerase domain-containing protein TERM 136 357615 - 357574 - g 83 -13 -3.16191 | gap 2, opp_overlap 357569 TTAGATTGTCATCAA CCGCCATACGCGCCACTCAC AGAA GAGAGAGGCGCG-A-GGCGG AGAGTCTGCTTAAAG Mthe_0362 357438 - 358109 + | translin family protein TERM 137 358121 - 358140 + F 73 -7.8 -3.9712 | opp_overlap 358121 GTAGAGCGTCAACTA CTCCGGTC TGAA GACCAGAG TTTCTGCTGCCCTGC TERM 138 359746 - 359733 - g 74 -6.7 -4.33819 | opp_overlap 359744, overlap 359743 ACGAGCTATAAGAAA CGGAT AGAC ATCCG GGGACCGGTATTCAC Mthe_0363 358176 - 359813 + | O-phosphoseryl-tRNA synthetase Mthe_0364 359875 - 360495 + | ribose 5-phosphate isomerase Mthe_0365 360485 - 361504 + | translation initiation factor IF-2B subunit alpha TERM 139 362073 - 362085 + F 73 -4.7 -4.78077 | CTGTGTAAACGTGAC CTGCC GGA GGCTG TTTCTTTTCATTACC Mthe_0366 362791 - 363099 + | translation initiation factor Sui1 Mthe_0367 363758 - 365098 + | Na+/solute symporter TERM 140 365190 - 365178 - T 71 -9.1 -3.53091 | ATTCCCTCCCCTAAA GGGTC GGA GACCC TCTGCGATTCAACAA TERM 141 365346 - 365332 - T 71 -8.6 -3.76568 | overlap 365315 365316 TGAGCCAGAAGAGAA GATCTG GCT CAGATC ACGCCTTCAACCCGA Mthe_0368 366643 - 365345 - | tryptophanyl-tRNA synthetase Mthe_0369 367022 - 368356 + | signal recognition particle protein Srp54 Mthe_0370 368550 - 368353 - | hypothetical protein Mthe_0371 368861 - 369619 + | hypothetical protein Mthe_0372 369722 - 370741 + | hypothetical protein Mthe_0373 370760 - 371995 + | MiaB-like tRNA modifying enzyme Mthe_0374 372588 - 372046 - | hypothetical protein TERM 142 372901 - 372911 + r 71 -6.8 -4.1891 | GTGCAGCGTTATGAG CCTG TCT CAGG TTTCTGTTCACAGGA Mthe_0375 373788 - 372991 - | hydrolase Mthe_0376 373976 - 374860 + | hypothetical protein Mthe_0377 375690 - 376619 + | ABC transporter related Mthe_0378 376603 - 377388 + | ABC-2 type transporter Mthe_0379 380274 - 377617 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 143 378623 - 378639 + g 71 -10.9 -3.27012 | overlap 378621 378636 GTGCGCTTGTGGTCT CCTGTGA TCA TCACAGG TCTTATGCCTGCTTT Mthe_0380 380584 - 381477 + | aldolase TERM 144 381546 - 381582 + F 80 -8.6 -4.3586 | gap 1, overlap 381549 GCATCATCCATTCGA GACCGCGGCCCCG-GTG CGCC CACACGCGGCGGCGCTC TTTTCCTGTAAATCC TERM 145 382482 - 382471 - g 71 -5.8 -4.3665 | GAACGGAAACATAAA CAGC GGTG GCTG GGCAATCTACGACCA Mthe_0381 381839 - 382573 + | hypothetical protein Mthe_0382 382714 - 383349 + | hypothetical protein Mthe_0383 383353 - 383970 + | cyclase family protein TERM 146 387904 - 387890 - g 71 -8.6 -3.78775 | CTTGCCATCAGCAAA CATCTC GTT GAGATG ATGGGCGGCAGGATC Mthe_0384 383999 - 389077 + | multi-sensor hybrid histidine kinase Mthe_0385 389194 - 390666 + | cobyric acid synthase Mthe_0386 390726 - 391874 + | molybdenum cofactor synthesis domain-containing protein Mthe_0387 392765 - 392283 - | hypothetical protein Mthe_0388 393335 - 393715 + | hypothetical protein Mthe_0389 393789 - 395315 + | hypothetical protein TERM 147 395399 - 395373 - T 71 -8.6 -3.72576 | opp_overlap 395375 395377, overlap 395374 395377 CCTCTCTCCATGAAA CGGAGCAGCCGG AGC CCGGATGCTCTA TACTGTCAGATGCAC TERM 148 395375 - 395397 + T 85 -13.4 -2.85999 | opp_overlap 395374 395373 395377, overlap 395377 TCTCTCCATGAAACG GAGCAGCCGG AGC CCGGATGCTC TATACTGTCAGATGC TERM 149 395377 - 395395 + T 72 -10.2 -2.97925 | opp_overlap 395374 395373 395377, overlap 395375 TCTCCATGAAACGGA GCAGCCGG AGC CCGGATGC TCTATACTGTCAGAT Mthe_0390 396164 - 395397 - | hypothetical protein Mthe_0391 396303 - 396764 + | hypothetical protein Mthe_0392 397350 - 396880 - | ribosomal-protein-alanine acetyltransferase Mthe_0393 397873 - 397367 - | hypothetical protein TERM 150 398063 - 398084 + G 83 -7.2 -4.65916 | GCATCCACGGCCGGA CCGAGCGC AGGTGA GGGCTCGG TTTTCTTCAAATCCG Mthe_0394 397973 - 398941 + | radical SAM domain-containing protein Mthe_0395 399376 - 400803 + | betaine-aldehyde dehydrogenase Mthe_0396 400816 - 402189 + | TrkA domain-containing protein Mthe_0397 402180 - 402470 + | TrkA domain-containing protein truD 402471 - 403772 + | tRNA pseudouridine synthase D TERM 151 404559 - 404573 + G 75 -11.4 -3.37344 | opp_overlap 404526 404544 404555, overlap 404549 CGCTGGAGAGACGCT GCAGCG GCT CGCTGC TTCATTCACTGGGAA Mthe_0399 403931 - 405199 + | Bcr/CflA subfamily drug resistance transporter Mthe_0400 406543 - 405488 - | hypothetical protein TERM 152 406418 - 406457 + g 77 -11.4 -3.57119 | gap 1, overlap 406421 CGGTGTGTAGAACGT GAACTCGGGCGTGA-CGCC TGC GGCGCTCACTCCTGGGATC TTTCCGACGTGTGTG TERM 153 406421 - 406454 + g 72 -11.7 -2.61322 | gap 1, overlap 406418 TGTGTAGAACGTGAA CTCGGGCGTGA-CGCC TGC GGCGCTCACTCCTGGG ATCTTTCCGACGTGT TERM 154 407702 - 407716 + H 80 -4.4 -5.35354 | overlap 407711 TACATTTTGATTTCA TTTTAA ATT TTAAAA TTTTTTAATTATATG TERM 155 409637 - 409665 + G 76 -11.7 -3.1085 | GATCTCCTGCATGAT GTGCAGATCTCGG AAT CCGAGATCGGGAC TGTTGCATCCCTTGG TERM 156 409848 - 409870 + G 77 -11.2 -3.57462 | opp_overlap 409848 409845 TGAATCTCAAGATCA GCGTCTCGCC AGA GGCGGCACGC TTTGGGGATAAGGTG TERM 157 410855 - 410882 + G 73 -10.6 -3.32343 | gap 1 GGCTATTGGAGCTGC TTGATCCCCGGGC AGA GCGCGGGGA-CAA TTCTGGGGATATCGG Mthe_0401 407855 - 411496 + | hypothetical protein Mthe_0402 413256 - 411805 - | indolepyruvate ferredoxin oxidoreductase Mthe_0403 414152 - 413241 - | hypothetical protein TERM 158 413664 - 413686 + g 72 -12 -2.7555 | overlap 413661 413666 CTCGGAGATGTTGTG CACGAGCGAC CAT GTCGCTCCTG TGGTCTTCGAGTCTG TERM 159 414360 - 414339 - R 78 -10.9 -3.43328 | overlap 414319 414333 GATCAAATACATCAA TGGGAGTGA TGGT TCACCCCCA TAAAAAAGCTCCGCT TERM 160 414399 - 414368 - R 77 -2.9 -5.252 | gap 1 CACCCCCATAAAAAA GCTCCGCTGGATGA GAGCG TC-TCCGGCAGCGC GCAACCAATGTGCAG Mthe_0404 414876 - 414487 - | hypothetical protein TERM 161 415797 - 415783 - g 79 -7.8 -4.46112 | opp_overlap 415782 415783 CTCGAGGGAAATAAA GCCCTC TGA AAGGGC GCTTTATGAGAGGCC Mthe_0405 415517 - 416362 + | phosphate binding protein TERM 162 416462 - 416473 + F 80 -7.2 -4.53303 | opp_overlap 416461 416459 416462, overlap 416461 416460 ATCATATGCAAACAG GCGG GACG CCGC TTTTCTGTGACGATA Mthe_0406 416488 - 417363 + | apurinic endonuclease Apn1 Mthe_0407 417769 - 417341 - | response regulator receiver protein Mthe_0408 418718 - 417819 - | tRNA-modifying enzyme Mthe_0409 419992 - 418781 - | malate dehydrogenase TERM 163 421024 - 421001 - g 82 -11 -3.85698 | GGCTTCTTCGACAAA CTGAGCGTTC TCCC GATCGCTCAG ACATTCGGCATCTCC Mthe_0410 420386 - 421324 + | nucleoside recognition domain-containing protein TERM 164 421939 - 421927 - T 73 -5.5 -4.60797 | GCCCTACAGAGAAAA GCCTC CGG GAGAC GAGCGTGTTCACAAC Mthe_0412 423191 - 422343 - | ribose-phosphate pyrophosphokinase Mthe_0413 424683 - 423331 - | peptidase U62, modulator of DNA gyrase Mthe_0414 425410 - 424643 - | hypothetical protein Mthe_0415 425589 - 425407 - | nucleolar RNA-binding protein Nop10p Mthe_0416 426365 - 425592 - | translation initiation factor IF-2 subunit alpha TERM 165 425715 - 425736 + g 76 -8.7 -4.05747 | GATCACCTTTATCCT GTACCTCGG CGCG CCGACGTAC TTTATCTCGAGTGTC rps27e 426541 - 426371 - | 30S ribosomal protein S27e rpl44e 426819 - 426538 - | 50S ribosomal protein L44e Mthe_0419 427393 - 426797 - | hypothetical protein Mthe_0420 428623 - 427436 - | DNA primase small subunit Mthe_0421 429378 - 428641 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 166 430139 - 430103 - g 73 -5.1 -4.58395 | overlap 430104 TGGAGGCCGCAAAAA TCCTGCTCGATAACC AGCTCAA GGGTATCGAGGAGGC TGTGCGCCGGAAGAA Mthe_0422 429550 - 430449 + | radical SAM domain-containing protein Mthe_0423 431332 - 432945 + | hypothetical protein TERM 167 433253 - 433234 - g 76 -3.4 -5.06223 | overlap 433229 ACAAAGGAAACAAAA CGGTTTGC AGGA GCGATCCG CTGGAGATACAGGCG Mthe_0424 432951 - 434393 + | hypothetical protein Mthe_0425 434390 - 434971 + | hypothetical protein TERM 168 436494 - 436452 - g 76 -9.3 -4.00782 | gap 2, opp_overlap 436463 436465, overlap 436465 436476 GGAGATGATCAGAAA GATCG-TGCAGGAAG-AGCTC AGG AAGCTGCTTCCAGCAGCGACC TGATGCTCTCTTCCT TERM 169 436463 - 436504 + G 71 -10.9 -3.23692 | gap 1, opp_overlap 436452 436465 436476, overlap 436465 GAAAGATCGTGCAGG AAGAGC-TCAGGAAGCTGCT TCC AGCAGCGACCTGATGCTCTC TTCCTACTGCTGATG TERM 170 436502 - 436465 - g 84 -13.5 -3.15427 | gap 1, opp_overlap 436463 436465, overlap 436452 436476 AAGATCGTGCAGGAA GAGC-TCAGGAAGCTGCT TCC AGCAGCGACCTGATGCTC TCTTCCTACTGCTGA TERM 171 436465 - 436502 + G 87 -13.5 -3.18023 | gap 1, opp_overlap 436452 436465 436476, overlap 436463 AAGATCGTGCAGGAA GAGC-TCAGGAAGCTGCT TCC AGCAGCGACCTGATGCTC TCTTCCTACTGCTGA Mthe_0426 434968 - 436497 + | hypothetical protein TERM 172 436490 - 436476 - f 70 -10 -3.18735 | opp_overlap 436465 436463, overlap 436452 436465 GGAAGAGCTCAGGAA GCTGCT TCC AGCAGC GACCTGATGCTCTCT Mthe_0427 436631 - 437515 + | hypothetical protein Mthe_0428 438256 - 439383 + | periplasmic binding protein Mthe_0429 439394 - 440221 + | methyltransferase type 12 TERM 173 440663 - 440648 - g 74 -3.2 -4.90079 | overlap 440650 440658 ACCTCAATAAGAAAA TACAGG AAAT CCTGGA CACCATCACGGGTCC Mthe_0430 440230 - 441015 + | band 7 protein Mthe_0431 441012 - 442136 + | transport system permease protein Mthe_0432 442133 - 442921 + | ABC transporter related Mthe_0433 444394 - 443297 - | radical SAM domain-containing protein Mthe_0434 448135 - 444401 - | cobaltochelatase, CobN subunit Mthe_0435 449290 - 448202 - | periplasmic binding protein TERM 174 450263 - 450287 + H 91 -3.5 -5.73339 | overlap 450265 450266 GTCCATTTTCATCCA TATCTACGACC TTG GGTCATGGGTG TTTTTTTATGATTAT Mthe_0436 450381 - 450548 + | CopG/Arc/MetJ family transcriptional regulator Mthe_0437 450545 - 450907 + | putative 6-pyruvoyl tetrahydropterin synthase TERM 175 451455 - 451443 - g 75 -6.9 -4.52589 | GGCGCTGATATAAAA GCCCC TCT GGAGC TCACCTGGTCCTGTT Mthe_0438 450900 - 451574 + | exsB protein Mthe_0440 452800 - 452426 - | hypothetical protein Mthe_0441 456571 - 452993 - | cobaltochelatase TERM 176 454081 - 454067 - G 74 -4.2 -4.73682 | GCCCAGAAGATAAAA CATCTG TGC CAGCTG CTCCCCGTCAGACCA Mthe_0442 457347 - 456562 - | ABC transporter related TERM 177 456693 - 456712 + g 75 -6.4 -4.58395 | GTGACGATGCGTCGC CGGCAG CCCATATC CTGCCG TTTTTGAGCACTGCG TERM 178 456980 - 456950 - G 74 -10.4 -3.53811 | opp_overlap 456963 456979 CTGAGCTGGCCGAAA TCCCGCATCGCGAG ATC CTCGAGATGGAGGA GCTCTATGACCTCTG Mthe_0443 458408 - 457341 - | transport system permease protein TERM 179 457559 - 457512 - G 71 -6.2 -4.33417 | gap 1, overlap 457508 TCCAGGGATAAGAAA CCTGTGATCTCCGCCTATGACCA TCC TGGTCATGTGCGGCG-CCACGAG ACCTATGAAGCCGAT Mthe_0444 459498 - 458428 - | periplasmic binding protein Mthe_0445 460606 - 459620 - | hypothetical protein TERM 180 460737 - 460724 - R 73 -5.3 -4.55997 | opp_overlap 460724 460720, overlap 460720 ACATATAATAACAAA TCAAC AGCT GTTGA TTGGTGCTCTCTTCA Mthe_0446 462020 - 461220 - | ABC transporter related TERM 181 461554 - 461535 - G 74 -4.9 -4.77438 | ATCCAGCAGCAAAAA CGATGGC TCCTGC GCCAGCG CCCTTGCGATCATGG Mthe_0447 463039 - 462017 - | transport system permease protein TERM 182 462275 - 462245 - G 74 -7.6 -4.21989 | overlap 462273 CACAAGCCCAACAAA GCCTATTATCCCGA CAA CCGAGACAACAGAC GACGCGGCGAGAGAT Mthe_0448 464073 - 463036 - | periplasmic binding protein Mthe_0449 464390 - 466399 + | magnesium chelatase Mthe_0450 466506 - 467420 + | dihydroorotate dehydrogenase 1B Mthe_0451 467441 - 468214 + | oxidoreductase FAD/NAD(P)-binding subunit Mthe_0452 468225 - 468947 + | 5-carboxymethyl-2-hydroxymuconate delta-isomerase Mthe_0453 469167 - 470111 + | rhodanese domain-containing protein Mthe_0454 470981 - 470142 - | diaminopimelate epimerase Mthe_0455 471040 - 472326 + | bifunctional hexulose-6-phosphate synthase/ribonuclease regulator Mthe_0456 472773 - 473150 + | helix-turn-helix, type 11 domain-containing protein Mthe_0457 473227 - 474591 + | GvpD gas vesicle Mthe_0458 475911 - 474697 - | proteasome-activating nucleotidase Mthe_0459 475961 - 476458 + | XRE family transcriptional regulator Mthe_0460 476460 - 477056 + | Sua5/YciO/YrdC/YwlC family protein TERM 183 477234 - 477252 + G 72 -11 -3.05463 | overlap 477240 AGGCGTTTGATTTTC TCAGGGTG AGA CGCCCTGA TTACGTCAGGGACGT Mthe_0461 477053 - 477988 + | DNA polymerase beta subunit Mthe_0462 478003 - 479541 + | thymidine phosphorylase TERM 184 480401 - 480383 - g 81 -3.8 -5.19212 | opp_overlap 480383 AGCATGATCAAAAAA GCGGTC GATGGCA AACCGC TTGTATTCGTGCTCA Mthe_0463 479642 - 480496 + | histone deacetylase superfamily protein Mthe_0464 480499 - 481353 + | hypothetical protein Mthe_0465 482081 - 481344 - | hypothetical protein TERM 185 482279 - 482256 - R 90 -10.4 -4.37886 | overlap 482258 TGAGCCTGTAGAAAA TATTGGAGAG ATCA CTCTCCAACA GCCCAGATGACCCAG TERM 186 482277 - 482258 - R 85 -10.8 -3.79687 | overlap 482256 AGCCTGTAGAAAATA TTGGAGAG ATCA CTCTCCAA CAGCCCAGATGACCC Mthe_0466 482845 - 482267 - | hypothetical protein TERM 187 483076 - 483058 - R 80 -8.2 -4.42806 | opp_overlap 483061 TGACCTCCAAATAAA TAAGAGCA AAT CGCTCTTA TCCATCTGATGACTT Mthe_0467 484349 - 483198 - | radical SAM domain-containing protein Mthe_0468 486080 - 484494 - | Na+/solute symporter TERM 188 484588 - 484578 - G 74 -4.6 -4.72986 | GATCGTGACTAAAAA CGCC AGC GGCA GCGCAACCACTATTG TERM 189 484671 - 484685 + g 79 -2.8 -5.24129 | overlap 484668 484667 GAATCTGGATATGCC GAGG GCCTCTG CCTC TTTTTTATGGACGAA Mthe_0469 486274 - 486086 - | hypothetical protein Mthe_0470 488082 - 486679 - | replication factor C large subunit TERM 190 487812 - 487832 + g 73 -8.9 -3.79864 | AGAACGTGCTCACCT GCGATGCCG GGC CGGCAATGC TCTTTATTATCTCCG Mthe_0471 488515 - 488087 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Mthe_0472 489650 - 488667 - | farnesyltranstransferase TERM 191 489358 - 489372 + g 77 -11.4 -3.46511 | ACCGCAGGTTTGCCA CGCCTC AGG GAGGCG TTATCCATTATGTCA Mthe_0473 491012 - 489672 - | beta-lactamase domain-containing protein TERM 192 489844 - 489867 + g 71 -9.6 -3.50893 | CAGTGGTCCTCCCTG CATGCATGTC CTGA GACATGCACG TTATCGTATATCCTT Mthe_0474 492100 - 491027 - | isopentenyl pyrophosphate isomerase Mthe_0475 492848 - 492102 - | aspartate/glutamate/uridylate kinase Mthe_0476 493817 - 492852 - | mevalonate kinase Mthe_0477 494634 - 493825 - | hypothetical protein TERM 193 494188 - 494220 + g 78 -12.2 -3.21924 | gap 1, overlap 494187 GACCTCGATGGCGGT CTCCTGATCCTGCAT GCCC ATGCAG-ATCGGGAG TATTCTGAAGCCTGA TERM 194 494578 - 494560 - G 89 -13.2 -3.54424 | opp_overlap 494564 CTTCAGCCCGCGAAA TGCAGAGC TGA GCTCTGCA AGCAGCGCCTCGGCC rps2P 495257 - 494637 - | 30S ribosomal protein S2 TERM 195 494905 - 494919 + g 73 -9.2 -3.89501 | TCAGGCTCTATGTAT CCCGCG AAA TGCGGG TTTGTGAGCGTGTTA TERM 196 494991 - 495003 + g 73 -10.5 -3.31726 | overlap 494989 CGCGAACATTGTAGC CGGCC TCT GGCCG TATTGTCTGGCAGAA Mthe_0479 495449 - 495267 - | RNA polymerase Rpb6 Mthe_0480 495745 - 495560 - | DNA-directed RNA polymerase subunit N rps9p 496150 - 495752 - | 30S ribosomal protein S9P Mthe_0482 496572 - 496162 - | ribosomal protein L13 Mthe_0483 496940 - 496578 - | 50S ribosomal protein L18e Mthe_0484 497794 - 497444 - | XRE family transcriptional regulator Mthe_0485 497882 - 498931 + | hypothetical protein Mthe_0486 499344 - 498940 - | hypothetical protein Mthe_0487 500073 - 499426 - | methyltransferase type 11 Mthe_0488 500286 - 501245 + | ADP-ribosylation/crystallin J1 argC 501285 - 502310 + | N-acetyl-gamma-glutamyl-phosphate reductase Mthe_0490 502418 - 502894 + | signal transduction protein Mthe_0491 502891 - 504057 + | arginine biosynthesis bifunctional protein ArgJ Mthe_0492 504262 - 505725 + | argininosuccinate lyase Mthe_0493 506239 - 505802 - | alkylhydroperoxidase Mthe_0494 507167 - 506244 - | hypothetical protein Mthe_0495 507729 - 507160 - | hypothetical protein Mthe_0496 508957 - 507731 - | putative CoA-substrate-specific enzyme activase Mthe_0497 509391 - 508954 - | hypothetical protein Mthe_0498 509826 - 509401 - | hypothetical protein TERM 197 509667 - 509689 + g 73 -10.6 -3.35774 | overlap 509661 509668 509670 TGGCTCTTATCTCCC TGACGAGATC TTC GATCTCGTCC TTCTCACCGTTTATG TERM 198 509668 - 509688 + g 81 -14.1 -2.60982 | overlap 509661 509667 509670 GGCTCTTATCTCCCT GACGAGATC TTC GATCTCGTC CTTCTCACCGTTTAT Mthe_0499 511352 - 509823 - | hypothetical protein Mthe_0500 512996 - 511395 - | ABC transporter related Mthe_0501 513913 - 513323 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Mthe_0502 515403 - 514240 - | major facilitator transporter Mthe_0503 515637 - 515404 - | AsnC family transcriptional regulator Mthe_0504 516183 - 515674 - | TPR repeat-containing protein Mthe_0505 516536 - 516195 - | hypothetical protein TERM 199 516944 - 516960 + H 76 -10.9 -3.12142 | overlap 516940 GGGTGTTATATGGCC TCTGGAG TTT CTCCAGA TATCTTGAGTATAAA TERM 200 517426 - 517414 - H 73 -4.9 -4.72846 | TTATATACTTAAAAA CTTAA TGA TTAAG CATGAACTATGGCTA Mthe_0506 517428 - 517760 + | hypothetical protein Mthe_0507 518344 - 517925 - | hypothetical protein Mthe_0508 519608 - 518367 - | hypothetical protein TERM 201 518807 - 518830 + g 71 -9.6 -3.58184 | gap 1 ATGGCGCCTTCGTCT CCGG-ATCCCA GAG TGGGGTTCCGG TTATCCTTATGCTGT Mthe_0509 520069 - 521160 + | hypothetical protein TERM 202 522335 - 522303 - g 75 -11.3 -3.31461 | CAGCGAGTGGTACAA TCCGGATGTTGAGCA GTA TGCCCATGATCCGGA GAAGGCGGGCGAGCT Mthe_0510 521350 - 522882 + | extracellular solute-binding protein Mthe_0511 522903 - 523652 + | cobyrinic acid a,c-diamide synthase Mthe_0512 523730 - 524185 + | hypothetical protein Mthe_0513 525355 - 524198 - | FAD dependent oxidoreductase TERM 203 525107 - 525086 - G 80 -8.7 -4.14739 | GTAGTGAGCGTAAAA CCCCTTCCT GTCC AGGAAGTGG CCCCCCGCATCGATC Mthe_0514 526073 - 526972 + | hypothetical protein Mthe_0515 528052 - 529308 + | major facilitator transporter TERM 204 529306 - 529324 + T 88 -7.5 -5.08086 | opp_overlap 529306 CCGAAAAAGCCAGAA TGAATGG ATAGA CCATTCA TTTTATATTTTTTGT TERM 205 529409 - 529441 + T 76 -7.1 -4.41609 | gap 2 TGCAAAAGTGCATTA CGCCCTGGAGATGCT CTGAT GGCATCTC--GGGCG TTTGTATTTATGATG Mthe_0516 530468 - 529479 - | hypothetical protein TERM 206 530083 - 530106 + g 70 -6.6 -4.15044 | TACTGCGTCCATGTG CCAGATCCGG CGAT CCAGAGCTGG TTTGTTCCCAGCAGG Mthe_0517 530915 - 531712 + | oxidoreductase FAD/NAD(P)-binding subunit Mthe_0518 533289 - 531715 - | cation transporter TERM 207 534393 - 534417 + H 81 -5.7 -4.97666 | overlap 534415 CTATGAGCTGCTATG TGCATAAAGGC GCA GCATTTTTGCA TTTTTGTGCTGTGTT Mthe_0519 534472 - 535341 + | transposase, IS4 family protein TERM 208 535631 - 535617 - g 70 -10 -3.44362 | ATATAACACTCAGAA TCGGCT ACC AGCCGA GCACCCATCAGATAG Mthe_0520 535529 - 536500 + | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 209 536552 - 536531 - f 71 -8.6 -3.63968 | CGGTAAACCCGGAAA GGGGTGGG CACAGC CCCTCCCC CTCATCGGAATGCTG Mthe_0521 536562 - 537281 + | binding-protein-dependent transport systems inner membrane component Mthe_0522 537587 - 539290 + | adenine deaminase Mthe_0523 539300 - 540415 + | radical SAM domain-containing protein Mthe_0524 540747 - 540412 - | hypothetical protein Mthe_0525 541858 - 540971 - | tungsten formylmethanofuran dehydrogenase, subunit C-like Mthe_0526 543104 - 542013 - | glycosyl transferase, group 1 Mthe_0527 544264 - 543140 - | glycosyl transferase family protein Mthe_0528 544755 - 545840 + | periplasmic binding protein Mthe_0529 545974 - 546897 + | ABC transporter related Mthe_0530 546894 - 547649 + | ABC-2 type transporter Mthe_0531 548299 - 550458 + | AAA family ATPase, CDC48 subfamily protein TERM 210 550486 - 550518 + F 83 -8.9 -4.41895 | overlap 550491 ATGATGCTGCTCGTC CCGTCGCCCGTCCGC TGT GAGGACGGGCTTCTG TTTTCATTGCGCATT TERM 211 550491 - 550513 + F 100 -14.8 -4.02762 | overlap 550486 GCTGCTCGTCCCGTC GCCCGTCCGC TGT GAGGACGGGC TTCTGTTTTCATTGC TERM 212 550540 - 550597 + F 71 -6.3 -4.13995 | gap 1, opp_overlap 550559 TTGCGCATTCCGGCA TGCTGCAGCTCATATGCAAGT-GAGACT CAG AGTCTCCACTTGAAACTGAACCGCTGCA TTTAATTTCTGGGCA Mthe_0532 550630 - 551427 + | fructose-bisphosphate aldolase TERM 213 551659 - 551639 - f 93 -14.7 -3.42503 | TGTCAAGAGTGAGAA CCCGGGCGT TCC ACGCCCAGG AAAAATAAGCGCCCG Mthe_0533 552096 - 554708 + | ATP-dependent helicase Mthe_0534 554705 - 555412 + | phosphoesterase, putative TERM 214 555444 - 555462 + T 91 -13.2 -3.44229 | TTTTAGGCTCCTCCG TGCAGCTC CTG GAGCTGCA TTATCCTCCTCAGCT Mthe_0535 556642 - 555431 - | SufBD protein Mthe_0536 557367 - 556630 - | ABC transporter related Mthe_0537 557851 - 557498 - | hypothetical protein Mthe_0538 558694 - 558131 - | hypothetical protein TERM 215 559314 - 559296 - H 73 -7.5 -4.16279 | opp_overlap 559296 559295 559298 GAGAGCAGCCGAAAA CATTCGA GAGAT TCGAATG ATTCATTGATCAGGT TERM 216 559364 - 559378 + H 70 -10 -3.26164 | opp_overlap 559362 559359, overlap 559362 TTACACAGAACCAGT GGCTAC CTA GTAGCC TCTTCTCAATAGTCT TERM 217 560095 - 560078 - g 70 -6.9 -4.19472 | GAATAGATTTGAAAA CCGCGAC CGTT GTCGCTG TCAAGCCTGTCGGCA Mthe_0539 559426 - 560604 + | 3-dehydroquinate synthase Mthe_0540 560643 - 561323 + | 3-dehydroquinate dehydratase, type I Mthe_0541 562328 - 562798 + | hypothetical protein Mthe_0542 562804 - 563907 + | aminotransferase, class I and II Mthe_0543 564615 - 564073 - | CopG/DNA-binding domain-containing protein Mthe_0544 565377 - 564637 - | UBA/THIF-type NAD/FAD binding protein Mthe_0545 566591 - 565413 - | proposed homoserine kinase TERM 218 565511 - 565561 + g 71 -7.5 -3.95183 | gap 1, opp_overlap 565511 CATCCACAGAATCCA CACATACCCCAGATCCCGCGATCG CAAA CGG-CACCGGGTCTGTGGAATGTG TTCTTATCTCTATGG TERM 219 565665 - 565684 + g 73 -5 -4.66938 | opp_overlap 565668, overlap 565668 CACGACCCTTTCGTC AAAGAGCT CTAT AGCTCTTA TTTTCTGTTCCACAT TERM 220 565668 - 565681 + g 75 -6.7 -4.44211 | opp_overlap 565668, overlap 565665 GACCCTTTCGTCAAA GAGCT CTAT AGCTC TTATTTTCTGTTCCA TERM 221 566619 - 566633 + r 71 -6.4 -4.15788 | GCTTCTCTTCGATTC CATCTC AGC GAGGTG TTTGTTCAGGACCTT Mthe_0546 567227 - 566598 - | methyl-coenzyme M reductase operon protein C TERM 222 566971 - 566952 - G 71 -10.6 -3.27704 | overlap 566947 AGGGGTCAAACCGAA CGTGGGGC CGTA GCCCCTCG ACGCCTGCGGAAAAG TERM 223 567011 - 566986 - G 83 -9.7 -4.07885 | GACGCCTGCGGAAAA GAGTCCGGAAC GCCT GTTCCAGCCTC GAGAACCAGAACGCT Mthe_0547 569503 - 567539 - | hypothetical protein Mthe_0548 570359 - 569493 - | protein of unknown function RIO1 Mthe_0549 571510 - 570383 - | isocitrate dehydrogenase (NAD(+)) TERM 224 571177 - 571193 + g 70 -9.3 -3.63627 | CGAAGAGGTCAAGCT CGCGGCG CAT CGCCACG TTTGCGCTCTCCAGG Mthe_0550 571799 - 572530 + | hypothetical protein Mthe_0551 572532 - 573347 + | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit Mthe_0552 573332 - 573862 + | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit Mthe_0553 573931 - 574491 + | hypothetical protein Mthe_0554 576728 - 574659 - | CoA-binding domain-containing protein TERM 225 574721 - 574750 + g 74 -2.7 -4.95758 | opp_overlap 574730 574732, overlap 574732 CAGCCTGCTCTGGCG TGGAGTAAACAGG AATG CCTGCGCGCTCCA TTTTTATCGTGTCCT Mthe_0555 577906 - 577616 - | hypothetical protein Mthe_0556 578516 - 578133 - | hypothetical protein Mthe_0557 578727 - 579572 + | MRP/NBP35 family ATP-binding protein Mthe_0558 580932 - 579640 - | radical SAM domain-containing protein TERM 226 580204 - 580222 + g 74 -3 -4.8622 | overlap 580206 AACCAGATCCACCCT CATGTCAG GCA CAGACAGG TTTTTCCTTCCCAGA TERM 227 581043 - 581066 + r 78 -11.1 -3.32844 | opp_overlap 581043 581041 581039 CAATAGGAGAAGAGA CTGCATCAG AGATCG CTGATGCAG TTATAGCATGGAAAA TERM 228 581066 - 581043 - R 76 -11.1 -3.22851 | opp_overlap 581043, overlap 581041 581039 CAATAGGAGAAGAGA CTGCATCAG AGATCG CTGATGCAG TTATAGCATGGAAAA Mthe_0559 581469 - 581110 - | dinitrogenase iron-molybdenum cofactor biosynthesis TERM 229 581273 - 581247 - G 71 -7.8 -4.02132 | opp_overlap 581269, overlap 581248 GCTGAAATGCAGAAA TGGCCTTCGGCC CCA GGCCGCCGGCGA TCACGACCTGCACGC Mthe_0560 581898 - 581473 - | dinitrogenase iron-molybdenum cofactor biosynthesis TERM 230 582269 - 582257 - g 83 -10.5 -3.98214 | opp_overlap 582258 ACCAGCCATCACAAA CCCGG GCT CCGGG GGCAGCACGGTCTCT Mthe_0561 582170 - 583054 + | beta-lactamase domain-containing protein Mthe_0562 583051 - 583986 + | radical SAM domain-containing protein Mthe_0563 584625 - 584008 - | hypothetical protein Mthe_0564 585495 - 584635 - | cobyrinic acid a,c-diamide synthase Mthe_0565 586325 - 585492 - | cobyrinic acid a,c-diamide synthase TERM 231 586403 - 586376 - R 71 -4.8 -4.65494 | overlap 586377 AAAGTATAGATAAAA CGCTGCGATC ATTTGCTA GACCGCAGCC TCTCAAGCCTCTCCC Mthe_0566 586635 - 586384 - | hypothetical protein Mthe_0567 588018 - 586810 - | cation diffusion facilitator family transporter Mthe_0568 588829 - 588071 - | zinc transporter ZupT TERM 232 588889 - 588865 - R 100 -7.1 -5.68438 | overlap 588866 CGATGAAATAAAAAA GTTTGTAGGCC TCT GGCCTACACAG CTGGCATGACGAGGG TERM 233 588888 - 588866 - R 85 -10.6 -3.99436 | overlap 588865 GATGAAATAAAAAAG TTTGTAGGCC TCT GGCCTACACA GCTGGCATGACGAGG Mthe_0569 590561 - 588882 - | coenzyme-B sulfoethylthiotransferase Mthe_0570 591342 - 590575 - | methyl-coenzyme M reductase, gamma subunit Mthe_0571 591856 - 591344 - | methyl-coenzyme M reductase, protein D Mthe_0572 593175 - 591871 - | methyl-coenzyme M reductase, beta subunit TERM 234 593471 - 593459 - R 81 -7.7 -4.61868 | TACTGATATACAAAA TTCGC ATT GCGAA TCGCAGGAACAAAAC Mthe_0573 595253 - 594162 - | radical SAM domain-containing protein Mthe_0574 595579 - 596388 + | peptidylprolyl isomerase, FKBP-type TERM 235 597041 - 597018 - g 100 -12.4 -4.53163 | overlap 597019 GTATACAGGATAAAA CCGCTCCGGA GGAT TCCGGAGCGC GAGGTCGCGATATAC TERM 236 597040 - 597019 - g 100 -15.9 -3.31175 | overlap 597018 TATACAGGATAAAAC CGCTCCGGA GGAT TCCGGAGCG CGAGGTCGCGATATA Mthe_0575 596412 - 597392 + | PP-loop domain-containing protein Mthe_0576 597452 - 597829 + | hypothetical protein TERM 237 598014 - 598044 + T 81 -9.7 -3.99229 | gap 1, overlap 598017 GCCCGTGGAGATCGG GAAGGCGCGGTCTG CCCT CAG-CCGCGTCTCC TTCTTCTCTTGATGT Mthe_0577 599481 - 598294 - | cobalt ABC transporter, ATPase subunit Mthe_0578 600242 - 599478 - | cobalt ABC transporter, inner membrane subunit CbiQ Mthe_0579 600530 - 600246 - | cobalt transport protein CbiN Mthe_0580 601216 - 600527 - | cobalt transport protein CbiM TERM 238 600941 - 600925 - G 72 -2.1 -4.83615 | overlap 600926 CATGCGCCAGAAAAA GCGCCTG GTA CAGGAGA ACGATTGTGGAGAGG Mthe_0581 601556 - 601780 + | deoxyribonuclease TERM 239 601799 - 601836 + T 80 -4.4 -5.26875 | gap 3, overlap 601805 601807 CCATTAGCTTTTGCA CAAGGTGTTTGC-TGGTTC TGC GAACCACGC-AAC-CTTTG TTTTTTGGTTACGCA TERM 240 601805 - 601832 + T 90 -7.8 -5.12785 | gap 1, overlap 601799 601807 GCTTTTGCACAAGGT GTTTGC-TGGTTC TGC GAACCACGCAACC TTTGTTTTTTGGTTA Mthe_0582 602682 - 602182 - | hypothetical protein Mthe_0583 603690 - 603004 - | hypothetical protein Mthe_0584 604862 - 603795 - | transcriptional regulator, TrmB TERM 241 604445 - 604455 + g 74 -6.8 -4.2704 | overlap 604442 CCTGAAGATCTACAG CCAG CGA CTGG TTTGTTGATGATACA Mthe_0585 606346 - 605138 - | hypothetical protein Mthe_0586 607220 - 606360 - | hypothetical protein Mthe_0587 607909 - 607217 - | ABC transporter related Mthe_0588 608662 - 609105 + | hypothetical protein Mthe_0589 609492 - 610286 + | undecaprenyl diphosphate synthase TERM 242 610615 - 610673 + F 75 -10.6 -3.37299 | gap 1, overlap 610607 610618 610619 GATGGTGGGGATGTC TAACCCTTATTCGGGCAGGTTCCATCT CTCCTC GGATG-AACGTGTCCGAATAAGGATTG TGTGTTTATGATGTG TERM 243 610618 - 610670 + F 82 -10.1 -3.80881 | gap 1, overlap 610607 610615 610619 GGTGGGGATGTCTAA CCCTTATTCGGGCAGGTTCCATCT CTCCTC GGATG-AACGTGTCCGAATAAGGA TTGTGTGTTTATGAT TERM 244 610619 - 610669 + F 85 -13.6 -2.87444 | gap 1, overlap 610607 610618 610615 GTGGGGATGTCTAAC CCTTATTCGGGCAGGTTCCATCT CTCCTC GGATG-AACGTGTCCGAATAAGG ATTGTGTGTTTATGA nac 610792 - 611142 + | nascent polypeptide-associated complex protein Mthe_0591 612009 - 611296 - | hypothetical protein Mthe_0592 612150 - 613181 + | putative transcriptional regulator Mthe_0593 613773 - 613324 - | hypothetical protein Mthe_0594 614644 - 613787 - | ATPases involved in chromosome partitioning-like TERM 245 614827 - 614782 - H 76 -9.2 -3.80881 | opp_overlap 614785, overlap 614826 ATTATAAACACATAA TCCTTATTCAGATACGTCCA TCTGTG TGAACGTGTCCGAATAATGA TTGAGCGTCTTCTCC TERM 246 615133 - 615122 - H 75 -3.6 -5.1485 | opp_overlap 615129, overlap 615129 GAATGAAGATAAAAA CCAG AAAT CCGG AGCTTACTGCCCCTG TERM 247 616092 - 616080 - g 74 -7.7 -4.21275 | GTAAGGCATTCAAAA TCCAG GAT CTGGA CCAGGGACGAGGTCG TERM 248 617567 - 617531 - g 70 -3 -4.78107 | gap 1, overlap 617536 CATCAGCATCAAAAA GATCAT-CTCGTGGCAG GAGT CGGCCAGGAGCATCATC CACAAAGGAGAGCAG Mthe_0595 615381 - 617615 + | DNA topoisomerase I Mthe_0596 619574 - 618261 - | peptidase U62, modulator of DNA gyrase TERM 249 618715 - 618733 + g 71 -7.4 -4.0641 | overlap 618717 TAAGATCTCAGTATC CCGTTCTC AAC GAGAACTG TTTCTCTCGCTGCAG Mthe_0597 621490 - 619583 - | ATP-dependent protease Lon TERM 250 621340 - 621359 + g 86 -12.8 -3.7282 | CTATGAGCATCACGT GGCGGCGC TGAT GTGCCGCC TTCTTGATCACCTCC Mthe_0598 621894 - 622124 + | AsnC family transcriptional regulator TERM 251 622275 - 622236 - g 100 -18 -3.28712 | overlap 622261 CGCGCGCCCTCATAA CATGCGTCAAGGAGGCTG TCGA CAACTCCCTTGACGCATG TGAGGATGCCGGCAT TERM 252 623903 - 623881 - g 90 -4.7 -5.34555 | opp_overlap 623881, overlap 623895 GTATACGATAAAAAA CCACCTGCA GAGAA TGCCGGAGG CTGTTGTCGAGGGGC Mthe_0599 622124 - 623965 + | DNA topoisomerase VI subunit B Mthe_0600 623958 - 625031 + | DNA topoisomerase VI subunit A Mthe_0601 625945 - 625094 - | signal transduction protein Mthe_0602 626392 - 625949 - | UspA domain-containing protein Mthe_0603 627545 - 626397 - | amidohydrolase TERM 253 626609 - 626588 - G 72 -2.2 -4.95155 | TGCACATCATAAAAA CCTGTCTG TCGTCT CTGACAAG CGCTTTTGAGAGAAG Mthe_0604 627547 - 628215 + | 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase Mthe_0605 628900 - 628202 - | hypothetical protein Mthe_0606 629227 - 629649 + | competence-like protein TERM 254 629874 - 629841 - T 79 -11.9 -3.11281 | gap 1, opp_overlap 629847, overlap 629839 629847 CCAGCTAAAAGGAGA TCAGAACAGC-GGC ACCACCA GCCGGCTGTTCTGA ATGATGCAGGTTTTA Mthe_0607 630069 - 629887 - | PUA domain-containing protein Mthe_0608 630852 - 630208 - | nuclease Mthe_0609 631003 - 631593 + | hypothetical protein Mthe_0610 631714 - 632685 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Mthe_0611 634001 - 632748 - | hypothetical protein TERM 255 633723 - 633741 + g 77 -7.4 -4.24342 | GACCCTGTCTGCGAT CACGAGCC CGG GGTTTGTG TTTCTTCCTGAGAGA Mthe_0612 634273 - 634887 + | ArsR family transcriptional regulator TERM 256 636532 - 636518 - g 82 -11.4 -3.78329 | opp_overlap 636516 636514 636513 CTTCAGGAAGGCAAA GCAGGC CGC GCCTGC GCTGATATTCTTCGA Mthe_0613 634908 - 637073 + | AAA family ATPase, CDC48 subfamily protein Mthe_0614 637937 - 637644 - | hypothetical protein Mthe_0615 639006 - 639680 + | hypothetical protein Mthe_0616 640499 - 639708 - | hypothetical protein Mthe_0617 642362 - 641559 - | fructose-bisphosphate aldolase Mthe_0618 643309 - 642611 - | FkbM family methyltransferase TERM 257 643515 - 643530 + G 71 -10.4 -3.21099 | CTTCATAGGCACCGG CTGCGG CGAG CCGCAG TTCCTGGTCCAGGCG Mthe_0619 643396 - 645279 + | acetyl-CoA hydrolase/transferase Mthe_0620 646388 - 645378 - | phosphate uptake regulator, PhoU Mthe_0621 647074 - 646394 - | phosphate uptake regulator, PhoU Mthe_0622 647880 - 647071 - | phosphate ABC transporter, ATPase subunit TERM 258 648142 - 648116 - R 75 -10.2 -3.41602 | opp_overlap 648116 648118 GTGAGCTGACCACAA GACCACAGCA CATGTAT TGCTGCGGTC TTGAGTCAGCAATCG aspC 649506 - 648202 - | aspartyl-tRNA synthetase Mthe_0624 650218 - 649568 - | hypothetical protein TERM 259 650322 - 650301 - R 80 -7.3 -4.57514 | opp_overlap 650306, overlap 650302 AGAATAAAACAGAAA GGATAGGGA TGGA TCCCTATCT AAGCCCACGCCTTGA TERM 260 650321 - 650302 - R 78 -10.8 -3.32068 | opp_overlap 650306, overlap 650301 GAATAAAACAGAAAG GATAGGGA TGGA TCCCTATC TAAGCCCACGCCTTG Mthe_0625 651355 - 650321 - | hypothetical protein Mthe_0626 652646 - 651591 - | putative translation factor pelota Mthe_0627 653057 - 652752 - | hypothetical protein Mthe_0628 653848 - 654489 + | HAD family hydrolase Mthe_0629 654526 - 655230 + | orotidine 5'-phosphate decarboxylase Mthe_0630 657385 - 655244 - | multi-sensor signal transduction histidine kinase TERM 261 656356 - 656366 + g 70 -3.2 -4.8048 | overlap 656355 CCTGGCTGAGTATGC TCTC CAG GAGG TTTTTGCTCTCGGCA TERM 262 657235 - 657224 - G 95 -5.8 -5.43866 | overlap 657230 GAATGCGTAAAAAAA GCAG AACG CTGC GATGGCTGATGACAT Mthe_0631 658188 - 657571 - | hypothetical protein Mthe_0632 658440 - 658751 + | protein translocase SEC61 complex, gamma subunit Mthe_0633 660330 - 659032 - | phenylacetate--CoA ligase Mthe_0634 661976 - 660642 - | glutamine synthetase, type I TERM 263 662130 - 662117 - H 73 -2.5 -5.04175 | opp_overlap 662117 662121, overlap 662121 TTAAGTAGATAAAAA TAATT TAAA AATTA ATTTATACACAGGAT TERM 264 662532 - 662520 - H 75 -3.3 -5.04987 | AAGAGGCTTAAAAAA TCACG GAG CGAGA GAAATGATGAACTGA Mthe_0636 663202 - 663489 + | CRISPR-associated Cas2 family protein Mthe_0637 663526 - 664101 + | CRISPR-associated Cas4 family protein TERM 265 665456 - 665491 + G 73 -10.7 -3.31248 | gap 1, opp_overlap 665458 TGAACACGCTCAACG GATTCATGCTTCTTCA TTATC TGAAGGAGC-TGAATC TTCTGAAGGATCTTG Mthe_0638 664105 - 665961 + | CRISPR-associated Csh1 family protein Mthe_0639 665958 - 666923 + | CRISPR-associated Csh2 family protein Mthe_0640 666933 - 667634 + | CRISPR-associated Cas5 family Hmari subtype protein Mthe_0641 667609 - 670023 + | CRISPR-associated helicase Cas3 TERM 266 670814 - 670791 - g 83 -9.6 -4.08394 | overlap 670779 670794 AGACCCCCTCGAAAA GGAGATCTCC AAGG GGAGATCTGC CAAAAAGAACGAAAA TERM 267 670843 - 670831 - g 76 -3.3 -5.10004 | AAAAAGAACGAAAAA TCGCC GCT GTCGA AGAGCGAGTTCCAGG Mthe_0642 670030 - 670872 + | hypothetical protein TERM 268 671124 - 671097 - T 95 -14.2 -3.74658 | opp_overlap 671097 671098, overlap 671088 671098 AAACAAGGATTGAAA CCCAGTCCTCCT CCTC AGGAGGACTGGC TTTTTCAAAGTCGAA TERM 269 671097 - 671124 + T 100 -14.2 -4.59773 | opp_overlap 671088 671097 671098, overlap 671098 AAACAAGGATTGAAA CCCAGTCCTCCT CCTC AGGAGGACTGGC TTTTTCAAAGTCGAA TERM 270 671098 - 671123 + T 100 -17.7 -3.35542 | opp_overlap 671088 671097 671098, overlap 671097 AACAAGGATTGAAAC CCAGTCCTCCT CCTC AGGAGGACTGG CTTTTTCAAAGTCGA TERM 271 671123 - 671098 - T 100 -17.7 -2.8371 | opp_overlap 671098 671097, overlap 671088 671097 AACAAGGATTGAAAC CCAGTCCTCCT CCTC AGGAGGACTGG CTTTTTCAAAGTCGA TERM 272 671928 - 671907 - T 73 -9.5 -3.44255 | overlap 671905 ACAAGGATTGAAACA GATGAACTG ATAC CAGTTCACC TCGGTCGTTTCGAGT TERM 273 672823 - 672790 - T 79 -10.3 -3.74658 | opp_overlap 672792, overlap 672792 AAACAAGGATTGAAA CATCTACTAGCGTCG CTTG CGGCGCAAGTAGATA TAGTGTCGAAGAGCG TERM 274 672821 - 672792 - T 78 -10.7 -3.44255 | opp_overlap 672792, overlap 672790 ACAAGGATTGAAACA TCTACTAGCGTCG CTTG CGGCGCAAGTAGA TATAGTGTCGAAGAG TERM 275 672792 - 672821 + T 81 -12.9 -2.85351 | opp_overlap 672790 672792 ACAAGGATTGAAACA TCTACTAGCGTCG CTTG CGGCGCAAGTAGA TATAGTGTCGAAGAG TERM 276 673473 - 673452 - T 71 -8.7 -3.74658 | opp_overlap 673446 AAACAAGGATTGAAA CGATTTGCC CCTG GGCATATCG GATCACTATCTGATG TERM 277 676475 - 676453 - T 80 -8.4 -4.47786 | overlap 676454 AAGGATTGAAACAAA TTCCAGCCCA GGA TGGGCTGAAG GCGCTCATCCGTCGA TERM 278 676474 - 676454 - T 82 -11.9 -3.27587 | overlap 676453 AGGATTGAAACAAAT TCCAGCCCA GGA TGGGCTGAA GGCGCTCATCCGTCG Mthe_0643 678262 - 677993 - | CRISPR-associated Csx3 family protein TERM 279 678122 - 678082 - G 95 -11 -4.56597 | overlap 678121 GTCGGGGGTCAAAAA CCGCGATCGCCCCCGCGG GAGAG CCGTGGAGGCGATGAAGG GCGAGACCGTATCTC Mthe_0644 679476 - 678262 - | hypothetical protein TERM 280 679065 - 679039 - G 72 -11.6 -3.14683 | opp_overlap 679054 ATAGCCTGCGAGGAA CTCAGCCACAGA TAT CCTGTGGCTCAG AGGTATGTCCGCTCC Mthe_0645 680506 - 679481 - | CRISPR-associated RAMP Cmr6 family protein Mthe_0646 680910 - 680509 - | CRISPR-associated Cmr5 family protein TERM 281 680674 - 680706 + g 100 -10.5 -5.31877 | opp_overlap 680674 CCTCGTGCGAATCCA GCCCGCGACCAGCTC GTA GAGCTTGTTATGGGC TTTTTTGTCGTCACT Mthe_0647 681710 - 680907 - | CRISPR-associated RAMP Cmr4 family protein family protein TERM 282 681465 - 681444 - G 91 -14.5 -3.04461 | GACCCACCTGTAAGA TCCGGTGAG GCTC CTCACCGGA AGGAGGAGAAGCCTG Mthe_0648 682798 - 681722 - | CRISPR-associated Cmr3 family protein Mthe_0649 684711 - 682795 - | CRISPR-associated RAMP Crm2 family protein Mthe_0650 685960 - 684695 - | CRISPR-associated RAMP Cmr1 family protein Mthe_0651 687708 - 685957 - | CRISPR-associated TM1812 family protein TERM 283 686460 - 686471 + g 75 -5.8 -4.57482 | GATCGTCCCACCACT TCGG GATC CCGA TTTGTTTATCACTCA TERM 284 686874 - 686893 + g 81 -8.6 -4.24342 | opp_overlap 686876 CTATCTCCAGCAGCA GATCCTCT GCCA GGAGGATC TTTATTGCTGAAAGA TERM 285 687010 - 687033 + g 100 -9.6 -4.91852 | gap 1, opp_overlap 686994, overlap 687012 CTCTGCGAACTCCTT TGCAGCGCTGG AGA CC-GCGCTGTA TTTCTTTTTAGTGGA TERM 286 687012 - 687031 + g 80 -10 -4.06997 | gap 1, opp_overlap 686994, overlap 687010 CTGCGAACTCCTTTG CAGCGCTGG AGA CC-GCGCTG TATTTCTTTTTAGTG Mthe_0652 688691 - 687822 - | transposase, IS4 family protein Mthe_0653 689899 - 689126 - | HAD family hydrolase TERM 287 690072 - 690057 - H 73 -4.6 -4.77759 | opp_overlap 690057 ACAACCTATTAAAAA CCCGGA AATC TTCGGG TTGTTATGCGGCTAC Mthe_0654 690078 - 690557 + | hypothetical protein Mthe_0655 690575 - 691171 + | hypothetical protein Mthe_0656 692036 - 691173 - | methionine aminopeptidase alaS 694921 - 692180 - | alanyl-tRNA synthetase TERM 288 694850 - 694839 - G 75 -5.8 -4.56597 | TCCCTGGTCCAAAAA CTGC CCCC GCAG CTCTCGCACACCTTG Mthe_0658 694982 - 695251 + | hypothetical protein Mthe_0659 697371 - 695908 - | DNA polymerase II small subunit TERM 289 697283 - 697293 + g 77 -4 -5.11613 | ATCAGATGGTCGATC GATA CTG TATC TTTTTTCGATAGTAT Mthe_0660 697508 - 698167 + | signal sequence peptidase Mthe_0661 698798 - 698160 - | fibrillarin Mthe_0662 699217 - 698795 - | CopG family transcriptional regulator TERM 290 700100 - 700111 + G 73 -5.8 -4.4195 | ATCAATCCACGAGTT TCCG TCAG CGGA TTTTGTGAGGTATGT Mthe_0663 699600 - 700160 + | hypothetical protein Mthe_0664 700230 - 700430 + | hypothetical protein TERM 291 700449 - 700428 - T 81 -3.7 -5.3671 | overlap 700433 700436 700445 AATATAACTAAAAAA TGAAGTTAC AGAT GGAACTCCA TGTGGAATGGGATAT Mthe_0665 701575 - 700433 - | hypothetical protein TERM 292 701763 - 701750 - R 73 -3.7 -4.94992 | opp_overlap 701749 701753, overlap 701751 701752 TGAAATGCACAAAAA GTGGC TGAT GCCCC GGAGGGCGTCAGCTT TERM 293 701753 - 701776 + r 93 -14.6 -3.51232 | opp_overlap 701750 701752 701751, overlap 701749 AATGCACAAAAAGTG GCTGATGCCC CGGA GGGCGTCAGC TTGATTTGAGCCGGA Mthe_0666 702860 - 701772 - | hypothetical protein Mthe_0667 703705 - 702890 - | hypothetical protein TERM 294 703598 - 703616 + g 70 -8.9 -3.7108 | CACCTTCTGCGCCTC GCAGTAC TGCTC GTACTGC TTTGGCTCTGGAAGT TERM 295 703892 - 703863 - R 71 -2.7 -4.8543 | overlap 703865 703866 GAAGTTGGATAAAAA TAGTTCAGACCCC GTGC GGGGTCTGCGTCA GGCTACGCGTTCAGA Mthe_0668 704634 - 703903 - | hypothetical protein TERM 296 704500 - 704521 + g 76 -9.5 -3.78934 | overlap 704486 704501 TGCATATCCATACTG TGTGGAGAT GATC ATCTCCACG TTCTTGTAGCCGACG Mthe_0669 705680 - 706624 + | hypothetical protein Mthe_0670 706627 - 707022 + | ribosomal protein S6e Mthe_0671 708157 - 707012 - | geranylgeranyl reductase Mthe_0672 710055 - 708154 - | Na+/solute symporter TERM 297 710172 - 710156 - H 72 -10.9 -2.72511 | overlap 710155 710170 TGCAGTTCGCGAAAG CCGCTTA TAC TAAGCGG GCAGAGCCGGTCCTG Mthe_0673 710196 - 711842 + | dihydroxy-acid dehydratase Mthe_0674 711839 - 712372 + | 2'-5' RNA ligase TERM 298 712458 - 712436 - f 71 -10.6 -2.8511 | GAGGATATCATCAGA TCTCCTCCAC AGG GTCGAGGAGA TCGCAGCTGCAAGGA TERM 299 713284 - 713267 - g 76 -5.5 -4.7497 | opp_overlap 713267 713266 GGCATCTATCAAAAA CCTTCTC GAGA GAGAGGG GTTTCAGGTGCTCAG Mthe_0675 712476 - 713681 + | tRNA adenylyltransferase Mthe_0676 714722 - 713688 - | histone deacetylase superfamily protein TERM 300 714724 - 714735 + H 70 -2.2 -4.95547 | TTGTATATCTGCATG GCGT TAAA ATGC TTTTCTTGTTATGCG TERM 301 717636 - 717615 - g 73 -9.4 -3.84674 | AGTCGAGGAGAAGAA GGTCGAGG AGGTTG CCCCGACC AACGTGACCGAGGAG Mthe_0677 715648 - 717810 + | S-layer-like domain-containing protein Mthe_0678 718454 - 717882 - | Mn2+-dependent serine/threonine protein kinase Mthe_0679 719482 - 718460 - | pyruvate formate-lyase activating enzyme Mthe_0680 719586 - 720881 + | pyridoxal-5'-phosphate-dependent enzyme, beta subunit TERM 302 721124 - 721111 - g 71 -5.9 -4.22554 | CGATCCAAGAAAGAA GCCGG TCGC CCAGC TGTCCCAGAACATGC Mthe_0681 720878 - 721639 + | ABC transporter related Mthe_0682 721636 - 722334 + | cobalamin synthesis protein, P47K Mthe_0683 722337 - 722948 + | Fe-S cluster domain-containing protein Mthe_0684 723239 - 723790 + | carbonate dehydratase Mthe_0685 723817 - 724443 + | superoxide dismutase Mthe_0686 724526 - 725476 + | 1-phosphofructokinase Mthe_0687 725978 - 725562 - | CoA-binding domain-containing protein Mthe_0688 727335 - 725983 - | beta-lactamase domain-containing protein Mthe_0689 728215 - 727340 - | rhodanese domain-containing protein Mthe_0690 729304 - 728936 - | hypothetical protein Mthe_0691 729540 - 729307 - | redox-active disulfide protein 2 Mthe_0692 730856 - 729558 - | rhodanese domain-containing protein Mthe_0693 731800 - 730952 - | PP-loop domain-containing protein TERM 303 731576 - 731557 - G 74 -4.3 -4.74103 | overlap 731562 TCTCTAACTCAAAAA CATCATG CACGGC CACGATG CACCTGATCCCCAGA Mthe_0694 732251 - 731784 - | PUA domain-containing protein TERM 304 732205 - 732191 - G 95 -10 -4.72986 | TATCGTCAGGAAAAA GAGCTG CTC CAGCTC CCCGCCCAAACTGAA TERM 305 732770 - 732790 + H 93 -12.7 -3.87956 | opp_overlap 732767 GAAATTTAGAGAGGT GATGCTGAT GAT ATCAGCATC TTTGATCTCAGTTTT Mthe_0695 732777 - 733130 + | transposase TERM 306 733218 - 733197 - f 100 -13.1 -4.60041 | overlap 733183 733209 733213 ATGCATTCTTAAAAA TGCACCTAC TAAC GTAGGTGCA GCAGATACTTTCAGT Mthe_0696 733774 - 734841 + | magnesium and cobalt transport protein CorA Mthe_0697 735194 - 735613 + | hypothetical protein TERM 307 736561 - 736545 - g 76 -10.9 -3.72027 | AGCCGCGACCAACAA GATCGAG CTC CTCGATC CGTCAATACGATCGA Mthe_0698 735706 - 736863 + | ATPase central domain-containing protein Mthe_0699 736876 - 737379 + | hypothetical protein TERM 308 737364 - 737381 + T 73 -3.4 -4.9138 | opp_overlap 737366, overlap 737359 TGATGGCGTTAAAAA GGTCAC AGTGGA GTGATC TTTTCTTTGGCTCAT Mthe_0700 738650 - 737595 - | tRNA splicing endonuclease Mthe_0701 739807 - 738653 - | hypothetical protein Mthe_0702 740662 - 739922 - | external DNA catabolism protein Mthe_0703 740732 - 742450 + | small GTP-binding protein Mthe_0704 743719 - 742847 - | phosphate ABC transporter, inner membrane subunit PstA TERM 309 743772 - 743746 - R 78 -5.1 -4.89477 | overlap 743763 CTTTTAATAACAAAA CGCCCGCAA TGAGTGAAG CTGCAGGCG CGAGAAGCCTGTAGC TERM 310 743814 - 743796 - R 75 -10.2 -3.35813 | CTGTAGCTGAACGAA GCCCCTAG GTT CAAGGGGC TGATGACAAGATCCG Mthe_0705 744971 - 744066 - | phosphate ABC transporter, inner membrane subunit PstC Mthe_0706 745283 - 745951 + | amino acid-binding ACT domain-containing protein Mthe_0707 746193 - 745948 - | glutaredoxin Mthe_0708 746522 - 746190 - | hypothetical protein Mthe_0709 747151 - 746657 - | hypothetical protein thyA 747498 - 748145 + | thymidylate synthase Mthe_0711 748791 - 748375 - | thioredoxin TERM 311 748749 - 748759 + g 70 -6.8 -4.16837 | CCAGCTCGCGCTTCA GCTC CTC GAGC TTCTTTCTCCTTATC Mthe_0712 749374 - 748784 - | hypothetical protein Mthe_0713 750396 - 749422 - | alanine dehydrogenase TERM 312 749692 - 749715 + g 72 -11.8 -2.71924 | gap 1, overlap 749691 749694 749696 749697 CACCTTCGCTCGTCT CAGGAGCCTCG GGT CGAG-CTCCTG CTTTCCAGGAGCGTC TERM 313 750518 - 750541 + G 78 -11.8 -3.28712 | gap 1 CAGCGAAGCATGCTT CGAT-GTGCGG CGC CCGCACGATCG TTCTGGAGGAACACA Mthe_0714 750451 - 751611 + | geranylgeranyl reductase Mthe_0715 754926 - 751807 - | Na+/solute symporter TERM 314 752594 - 752578 - G 70 -10.1 -3.34902 | overlap 752576 CCTGAGGAGATAAGA CGGCAGA GGG CCTGCCG TGAATATCAGACCCC Mthe_0716 755765 - 755139 - | KaiC TERM 315 756205 - 756185 - R 73 -2.4 -5.08824 | opp_overlap 756185 TGTGGATCTAAAAAA GCTCCTCG TCCTG CGTGTAGC TCTTTCCGAGCCTCA Mthe_0717 757625 - 756177 - | dihydropteroate synthase-related protein Mthe_0718 757861 - 757622 - | hypothetical protein Mthe_0719 758247 - 757858 - | hypothetical protein Mthe_0720 758957 - 758253 - | hypothetical protein TERM 316 759519 - 759486 - R 76 -7.5 -4.46112 | gap 1 TTTTATTCAAATAAA TACGGGTGAGAAGTCC AGA GGA-TGCTCACACGTA CATATCTCCGCGCTC Mthe_0721 761781 - 759511 - | AAA family ATPase, CDC48 subfamily protein Mthe_0722 763706 - 762390 - | DNA primase Mthe_0723 765134 - 764079 - | hypothetical protein TERM 317 764488 - 764509 + g 71 -4.3 -4.65838 | GATTCCTGGATCCTG CCACCGAAC CTCT GTGCGATGG TTTTTGCGATATGTC Mthe_0724 765445 - 765110 - | hypothetical protein TERM 318 765311 - 765287 - G 75 -6.3 -4.56597 | opp_overlap 765287 765302 TTCCTGGCCGAAAAA GCTCACGCTCA CCT CGAGCTGGAGC TCTTTCTCCGTGAAC Mthe_0725 766374 - 765472 - | hypothetical protein Mthe_0726 767583 - 766384 - | S-adenosylmethionine synthetase TERM 319 767717 - 767698 - H 77 -6.4 -4.65895 | opp_overlap 767700 CCTGCCATCCAAAAA CAGCAAGC CACA GCTTTCTG AATTCAGCTCTTAAT TERM 320 768080 - 768060 - g 73 -5.3 -4.58395 | TGGATTCGTGAAAAA CGCCTGGGA TGT TCTCACGCG GCTGGCACTCGATCT TERM 321 768359 - 768408 + G 83 -12.8 -3.16191 | opp_overlap 768374 GAGACATCTTCAGGC GCAGACGGTACCACAGGGATCC ACTGGA GGATCTCCGTGGCGCTGACTGC TTCATAAACATGTCA TERM 322 768484 - 768458 - g 74 -7.2 -4.18094 | opp_overlap 768470, overlap 768450 768448 768447 768462 768465 GAAAGCATCTCAAAA GAGAGATGATGC TCA GCAGCATCGCCC GCAAGTATGGTGTGC Mthe_0727 767803 - 769506 + | NAD+ synthetase Mthe_0728 770193 - 769675 - | CRISPR-associated Cas4 family protein Mthe_0729 770452 - 770186 - | hypothetical protein Mthe_0730 771960 - 770800 - | chaperone protein DnaJ Mthe_0731 773822 - 771975 - | chaperone protein DnaK Mthe_0732 774401 - 773865 - | GrpE protein TERM 323 774180 - 774195 + g 83 -6.1 -4.96501 | GAACCTTGCGAGCTC CTCCC TCTCCC GGGAG TTTCTTTTTATGACG TERM 324 774442 - 774419 - R 76 -8.2 -4.11216 | opp_overlap 774404 774418 774421 CGCCCACCCTCAAAA GAGGATGTGA GTGC TTACATCCTC GTGTAGTCGTGTGGA Mthe_0733 776058 - 774433 - | thermosome Mthe_0734 776509 - 776342 - | hypothetical protein TERM 325 777963 - 777980 + GH 71 -8.5 -3.67878 | GAGCATAAAGGTGTA TCTCTCT GAGA AGAGAGA TTCTGTTCCGGTCGT Mthe_0735 776896 - 778149 + | hypothetical protein Mthe_0736 778121 - 779146 + | protein of unknown function Met10 Mthe_0737 779959 - 779225 - | hypothetical protein Mthe_0738 781190 - 779964 - | hypothetical protein TERM 326 780533 - 780520 - G 81 -6.7 -4.81212 | overlap 780524 CCCACCAGAACAAAA CCATC TCCA GATGG GATCATCGAGAGCGC TERM 327 780588 - 780574 - G 81 -8.6 -4.25104 | CCCGTGCCACCAAAA GATCTG TTC CAGATC TCCGACCCCAGATGG Mthe_0739 781681 - 781280 - | hypothetical protein Mthe_0740 782542 - 782132 - | hypothetical protein TERM 328 782592 - 782603 + r 71 -4.4 -4.77757 | CTCTGTATACCTGCA GCAT CTTA ATGC TTTTGCTTTTTCGAG Mthe_0741 782986 - 782597 - | NifU domain-containing protein Mthe_0742 783299 - 783583 + | non-histone chromosomal MC1 Mthe_0743 784166 - 783669 - | rubrerythrin Mthe_0744 784872 - 784210 - | nitrite and sulphite reductase 4Fe-4S region TERM 329 785461 - 785408 - R 75 -8.1 -4.15222 | gap 1, overlap 785412 785413 ATGCGCCTCAAGAAA TCAAG-TGGATCCGCCAGAATGCCGA TTC CCTGCATTCTGGCGGTTCGAGCCCGC CACCCGAACGAATCG TERM 330 785456 - 785412 - R 88 -12.1 -3.68738 | overlap 785408 785413 GCCTCAAGAAATCAA GTGGATCCGCCAGAATGCCGA TTC CCTGCATTCTGGCGGTTCGAG CCCGCCACCCGAACG TERM 331 785455 - 785413 - R 95 -15.6 -2.80761 | overlap 785412 785408 CCTCAAGAAATCAAG TGGATCCGCCAGAATGCCGA TTC CCTGCATTCTGGCGGTTCGA GCCCGCCACCCGAAC Mthe_0745 786826 - 785504 - | diaminopimelate decarboxylase Mthe_0746 786874 - 787815 + | HEAT repeat-containing PBS lyase Mthe_0747 788305 - 787865 - | large conductance mechanosensitive channel protein Mthe_0748 788523 - 789302 + | hypothetical protein Mthe_0749 789991 - 789407 - | hypothetical protein Mthe_0750 790715 - 790053 - | phosphoribosyltransferase Mthe_0751 791249 - 790974 - | hypothetical protein Mthe_0752 792523 - 791321 - | hypothetical protein TERM 332 792824 - 792801 - H 75 -11.7 -2.67515 | overlap 792798 GGTATTAGGAGAGGA GGCGCCTGC CCCAAT GCAAGCGCC AGATGGCATCGCTCG TERM 333 792964 - 792953 - H 75 -5.8 -4.49981 | opp_overlap 792953 792957, overlap 792956 792957 TATAGTATTACAAAA CCAG CCAC CTGG TGGTATACTCATATC Mthe_0753 793366 - 793611 + | hypothetical protein Mthe_0754 794577 - 793966 - | hypothetical protein Mthe_0755 794885 - 795526 + | NADPH-dependent FMN reductase Mthe_0756 796211 - 795504 - | hypothetical protein TERM 334 795994 - 795968 - G 77 -8.1 -4.11394 | gap 1, opp_overlap 795988 AGTTCACCCCGAAAA CCCTGACGTAAG CTGT CCTA-GTCAGGG GCATCTCCGACTTCA Mthe_0757 796263 - 796919 + | phosphoglycerate mutase 1 family protein Mthe_0758 797108 - 797593 + | hypothetical protein Mthe_0759 799403 - 798324 - | hypothetical protein TERM 335 799999 - 800016 + H 76 -11.3 -3.17794 | opp_overlap 799986, overlap 799997 AACGGGTCTGCTGAG CCATCCC GACG GGGATGG TGTTGATGATCCGTT TERM 336 800231 - 800215 - g 74 -2.2 -5.09204 | AGAGGTCAACAAAAA CCTTTC AGACA GAGAGG CGCTGGTGGATTACA Mthe_0760 800162 - 800464 + | hypothetical protein Mthe_0761 801435 - 800638 - | coenzyme M methyltransferase subunit X Mthe_0762 802410 - 801445 - | AIR synthase-like protein Mthe_0763 802953 - 803525 + | hypothetical protein Mthe_0764 803740 - 804945 + | phosphotransferase domain-containing protein Mthe_0765 809816 - 804942 - | hypothetical protein TERM 337 807464 - 807478 + g 72 -11.4 -3.02144 | ACGTTTTCACGCTCT CCGGCA GGA TGCCGG TGTTAGAGGGGATGC Mthe_0766 810426 - 811379 + | hypothetical protein Mthe_0767 811422 - 812288 + | triphosphoribosyl-dephospho-CoA protein Mthe_0768 812301 - 812882 + | hypothetical protein Mthe_0769 814927 - 813296 - | thermosome Mthe_0770 815391 - 817130 + | hypothetical protein TERM 338 819420 - 819392 - g 75 -11.7 -2.94099 | opp_overlap 819388 819390 819393 CTCGTTCAGGAGAGA GCCAGCATCAGCT GGC AGCTGCTTCTGGC TGCGCTGGTTCTATT Mthe_0771 817112 - 819481 + | von Willebrand factor, type A TERM 339 819487 - 819474 - T 74 -9.5 -3.51924 | GTCTGAGGGAGATAA GGGGG TGAT CCCCC TCGAAGGACTGTCGC Mthe_0772 819851 - 819618 - | hypothetical protein lysK 821418 - 819925 - | lysyl-tRNA synthetase Mthe_0774 821768 - 822193 + | formylmethanofuran dehydrogenase subunit E-like Mthe_0775 822195 - 822926 + | ABC transporter related Mthe_0776 822930 - 823745 + | ABC-3 protein Mthe_0777 824267 - 824034 - | hypothetical protein Mthe_0778 825265 - 826266 + | alcohol dehydrogenase TERM 340 827264 - 827251 - f 75 -8.1 -4.26019 | CAACCAGAGGTAAAA CAGCC TGTG GGCTG CAGCAAAGAAAATCA TERM 341 828522 - 828483 - g 72 -12.3 -2.80816 | gap 2 TCCTCAGGCACCATA TTGGCGACATGCCCCGACG ATAT CGCCGAGGCATG-CGC-AA TCGCCCGGCGGGCAT Mthe_0779 827406 - 830204 + | DEAD/DEAH box helicase domain-containing protein TERM 342 830410 - 830422 + G 77 -7.7 -4.25458 | AGGAAAGGGGCCTGT CATCG GAT CGATG TTTGTTGCTGGCGTT Mthe_0780 830366 - 831001 + | ribonuclease HII Mthe_0781 831025 - 832170 + | aminotransferase, class V TERM 343 832175 - 832201 + F 72 -10.8 -2.69471 | overlap 832174 TTGACAGATGAGCCC CCTCTGGAATGG GAT CCACTCCAGCGG CTTGTCTGGAGATAC Mthe_0782 832359 - 832682 + | alkylhydroperoxidase TERM 344 832724 - 832699 - T 91 -11.9 -4.08144 | opp_overlap 832701, overlap 832678 832701 TCTACGAAGTAGAAA CAGCGACTGCT AAAG AGCAGTCGCTT CTGACATCGACCTCT TERM 345 832722 - 832701 - T 95 -14.5 -3.63241 | opp_overlap 832701, overlap 832678 832699 TACGAAGTAGAAACA GCGACTGCT AAAG AGCAGTCGC TTCTGACATCGACCT TERM 346 832701 - 832722 + T 93 -14.5 -3.32963 | opp_overlap 832678 832701 832699 TACGAAGTAGAAACA GCGACTGCT AAAG AGCAGTCGC TTCTGACATCGACCT Mthe_0783 833468 - 833013 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Mthe_0785 835884 - 834346 - | extracellular solute-binding protein TERM 347 836071 - 836053 - R 71 -4.5 -4.65895 | GTCTGCAGGTAAAAA TGACGTC TCGTG GGCGTCA TCAGAAGATAATCTT Mthe_0786 836398 - 836144 - | hypothetical protein TERM 348 836500 - 836490 - H 77 -6.8 -4.55491 | CATTCAAGCATAAAA GGCA GTG TGCC GAAATTTGCTGTGAT Mthe_0787 836733 - 838676 + | nitrous oxidase accessory protein-like TERM 349 838679 - 838706 + F 82 -5.6 -5.12474 | opp_overlap 838679 CGGTACACAATGAGA TCCGCAGG TCATCATATCTC CCTGCGGA TTTTTATATCTTCTC Mthe_0788 839074 - 840222 + | 3-isopropylmalate dehydratase Mthe_0789 840219 - 840869 + | phosphotransferase domain-containing protein Mthe_0790 841534 - 841010 - | phosphopantetheine adenylyltransferase Mthe_0791 841959 - 841528 - | cytidyltransferase-like protein Mthe_0792 842369 - 841995 - | Mov34 family protein Mthe_0793 843366 - 842356 - | biotin--acetyl-CoA-carboxylase ligase Mthe_0794 844849 - 843350 - | pyruvate carboxylase subunit A TERM 350 846001 - 845974 - H 72 -10.6 -3.02043 | gap 1, overlap 845962 AAGGGCCGGGCAAGA CCGGTGCCAGCCG CCG CGG-TAACACCGG CGGCTCGAGTGGTAA TERM 351 846893 - 846935 + H 74 -9.9 -3.53343 | opp_overlap 846881 AACCACCCGAGTAGG GTCCGGATGAGGGTGTATC CTCTT GATACATTCGAATCCGGGC TTTGCAAGGGGGGTT TERM 352 849714 - 849698 - H 73 -5.1 -4.5954 | TTAGATGACAGAAAA GCTACCC CGG GGATAAC AGAGTCGTCACCGGC Mthe_0795 850578 - 851075 + | hypothetical protein Mthe_0796 851652 - 851437 - | trehalose-6-phosphate synthase TERM 353 851978 - 851962 - R 79 -10.9 -3.50588 | overlap 851960 ATGTGACAGGAAACA CCACGAA CCA TTCGTGG GATCAAATCGCTGAA Mthe_0797 853452 - 852226 - | glycosyl transferase, group 1 Mthe_0798 854074 - 853430 - | hypothetical protein Mthe_0799 856272 - 854071 - | HAD family hydrolase Mthe_0800 858575 - 856494 - | ski2-like helicase Mthe_0801 858657 - 859811 + | aminotransferase, class I and II TERM 354 860095 - 860117 + G 78 -13.4 -2.64422 | AGTCGGGCTCAGCGA GCTGATCGCG AAC CGCGATCCGC TGATATGGGATGTCT TERM 355 861321 - 861335 + G 72 -11.4 -3.05384 | opp_overlap 861319 861321 861320 GCGCAAGAAGAAAGG GCCTGG GGA CCAGGC TTCCCTGGGACAGGG TERM 356 862660 - 862639 - g 71 -10.9 -3.30124 | gap 1 GGGCAGGGCTCAGAA CGCAGAGCCT GGA AGGC-CTGCG ATATACATAGAGTGA leuS 859823 - 862675 + | leucyl-tRNA synthetase TERM 357 862698 - 862672 - T 72 -10.2 -3.08197 | gap 1, opp_overlap 862671 862672 TGCGATATACATAGA GTG-ACCGGCC GGCAGA GGCCGGTGCAC ATTTCTCACATTCAG TERM 358 862672 - 862698 + T 72 -10.2 -2.95192 | gap 1, opp_overlap 862672, overlap 862671 TGCGATATACATAGA GTG-ACCGGCC GGCAGA GGCCGGTGCAC ATTTCTCACATTCAG Mthe_0803 863362 - 862814 - | DJ-1 family protein Mthe_0804 864175 - 863816 - | hypothetical protein Mthe_0805 864474 - 865061 + | heat shock protein Hsp20 Mthe_0806 865803 - 865315 - | hypothetical protein valS 865894 - 868461 + | valyl-tRNA synthetase Mthe_0808 868458 - 869039 + | putative adenylyl cyclase CyaB Mthe_0809 869210 - 870037 + | F420-dependent methylenetetrahydromethanopterin dehydrogenase TERM 359 870127 - 870088 - T 83 -9.9 -4.25347 | AAGCAGCAACATAAA GGCGACAGCACCTATGC CTAACT GCGAAGGCACCGTCGCC CAGCCAGATCGGTTG Mthe_0810 870843 - 870211 - | hypothetical protein Mthe_0811 870999 - 871577 + | HEAT repeat-containing PBS lyase TERM 360 871597 - 871584 - T 70 -2.3 -4.83615 | overlap 871585 CAGCGCTGACAAAAA TGCTG GGAA CAGCG TGACCTCCCGAAGAT Mthe_0812 872297 - 871638 - | phosphotransferase domain-containing protein Mthe_0813 872579 - 873859 + | hypothetical protein Mthe_0814 874862 - 873978 - | hypothetical protein TERM 361 874748 - 874716 - G 73 -10.5 -3.36878 | overlap 874718 TGCAGTCAGTGAGAA GACCTGCTGGGCCAG CAC CTGGCACAGAAGGTA AACCTTGGGCTCCTG TERM 362 874746 - 874718 - G 83 -13.1 -3.254 | overlap 874716 CAGTCAGTGAGAAGA CCTGCTGGGCCAG CAC CTGGCACAGAAGG TAAACCTTGGGCTCC TERM 363 876333 - 876318 - g 74 -6.8 -4.25848 | AATGCCTGACGAAAA CGCAAC TGCA GTCGCG AACGCCACGCCGGCC TERM 364 876470 - 876482 + G 70 -9.1 -3.66378 | opp_overlap 876468 876470 876473 CAGATCTTGAGAATA GGAGC ACA GCTCC TTTGCCTGCGGTGTC Mthe_0815 875293 - 878667 + | hypothetical protein Mthe_0816 878676 - 879590 + | hypothetical protein TERM 365 879678 - 879664 - f 74 -2.8 -5.10163 | AATCTGAAAACAAAA TTGCAG AAG CTGAAA AGAGCCCATACACAA TERM 366 879754 - 879734 - f 90 -9 -4.57569 | opp_overlap 879734 879747 GGAGCCCGTGAAAAA GCAGCTAC TGAAT GTAGCCGC TGCTTCTACGGTATA pgk 880397 - 881611 + | phosphoglycerate kinase Mthe_0818 882683 - 881736 - | phosphoesterase domain-containing protein trkA 882796 - 884109 + | potassium transporter peripheral membrane component TERM 367 884660 - 884706 + G 83 -10.6 -3.99374 | AGGGCACGTGGATTT CGGCGGCGACGTCACACGAGCG ATG CGCGCGGTTGATGGCGCAGTCG TTGTTGTTGATGCAG Mthe_0820 884358 - 886550 + | elongation factor EF-2 Mthe_0821 886618 - 887892 + | elongation factor 1-alpha rps10p 887908 - 888216 + | 30S ribosomal protein S10P Mthe_0823 888343 - 888915 + | GTP-binding protein TERM 368 888905 - 888924 + T 81 -12.8 -2.50994 | overlap 888904 TAGAGATGGCTTCAT CCTCGCCC TGAA GGGCGGGG CTTCCTGCGCTTCAA Mthe_0824 889630 - 889184 - | hypothetical protein TERM 369 889471 - 889451 - G 78 -11.9 -3.26473 | overlap 889441 GTAAACCATGAGCAA TGCCCTGGA GCA TCCAAGGCA TCTGGCTGCGACCAT Mthe_0825 890400 - 889627 - | dihydrodipicolinate reductase TERM 370 890057 - 890072 + g 72 -2.5 -4.95758 | gap 1, opp_overlap 890057 890060 TTGGGTGAGATCACA GCAGCG ATGCC CGC-GC TTTTTATCATCTCCT Mthe_0826 891284 - 890397 - | dihydrodipicolinate synthase Mthe_0827 891537 - 891277 - | ribosomal protein S17E-like Mthe_0828 892979 - 891621 - | phosphomethylpyrimidine kinase TERM 371 892829 - 892866 + g 72 -11.9 -2.58544 | opp_overlap 892829 892827 892830, overlap 892829 CTGGTATGGGAAACA CCTCGCGAACGCCCAGA GTGT TCTGGGCGGTCACGGCG GTTATAACACTCAAA TERM 372 892829 - 892867 + g 78 -11.7 -3.31144 | gap 1, opp_overlap 892829 892827 892830, overlap 892829 CTGGTATGGGAAACA CC-TCGCGAACGCCCAGA GTGT TCTGGGCGGTCACGGCGG TTATAACACTCAAAC TERM 373 892866 - 892829 - G 80 -11.9 -3.38046 | opp_overlap 892829 892829, overlap 892827 892830 CTGGTATGGGAAACA CCTCGCGAACGCCCAGA GTGT TCTGGGCGGTCACGGCG GTTATAACACTCAAA TERM 374 892864 - 892830 - G 75 -12.9 -2.62613 | gap 1, opp_overlap 892829 892829, overlap 892829 892827 TGGTATGGGAAACAC CTCGCGAACGCCCAGA GTGT TCTGGGCGGTCACG-G CGGTTATAACACTCA Mthe_0829 893534 - 892989 - | hypothetical protein Mthe_0830 894028 - 893594 - | hypothetical protein TERM 375 893944 - 893975 + g 100 -19.6 -3.25223 | opp_overlap 893968 CCTCGAGCAGCTCGG CCAGCGTCTTCCTC TTCG GAGGAAGATGCTGG TTCATCGTCTGGATC Mthe_0831 894917 - 894060 - | Pre-mRNA processing ribonucleoprotein, binding region Mthe_0832 895361 - 894936 - | histidine triad (HIT) protein Mthe_0833 896695 - 895433 - | phosphopyruvate hydratase TERM 376 898353 - 898319 - g 74 -8 -3.95073 | gap 2 TCCGATATGCACAAA TCCCGCGAA-CCA-GG TGCAG CCATGGATTCACGGGA ATACGATAGTATGGG Mthe_0834 896844 - 900452 + | periplasmic component of the Tol biopolymer transport system-like TERM 377 900522 - 900553 + T 73 -10.2 -3.25204 | opp_overlap 900525, overlap 900520 900519 GGGCACAGTCCGCAA GGATGGAAGCTC AGGATTTA GAGCCTCCATCC TCTATTTCCCCCTCC Mthe_0835 904260 - 900532 - | cobaltochelatase Mthe_0836 905471 - 904278 - | periplasmic binding protein Mthe_0837 905979 - 905710 - | translation elongation factor aEF-1 beta Mthe_0838 906229 - 905990 - | hypothetical protein Mthe_0839 907033 - 906413 - | aspartate/glutamate/uridylate kinase Mthe_0840 907923 - 907108 - | NAD(+) kinase Mthe_0841 908728 - 907910 - | bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase TERM 378 909384 - 909367 - g 85 -9.1 -4.52589 | gap 1 GGCTCGCAGAGAAAA GGGCG-GC AGA GCACGCCC TGAACGCTGTCAGGC Mthe_0842 909021 - 909500 + | riboflavin synthase hisD 910865 - 909585 - | histidinol dehydrogenase Mthe_0844 912536 - 910878 - | DNA ligase I, ATP-dependent Dnl1 Mthe_0845 913543 - 912536 - | homoserine dehydrogenase Mthe_0846 914043 - 913540 - | amino acid-binding ACT domain-containing protein TERM 379 914430 - 914403 - g 71 -9.9 -3.52906 | overlap 914404 GATAAGCGCAGACAA TGTGACCCTGA GGGGGT TCAGGGTCACG AACTCCGGTAGTTGC TERM 380 914429 - 914404 - g 79 -13.4 -2.71261 | overlap 914403 ATAAGCGCAGACAAT GTGACCCTGA GGGGGT TCAGGGTCAC GAACTCCGGTAGTTG Mthe_0847 914122 - 914640 + | cell surface protein Mthe_0848 914979 - 915434 + | hypothetical protein TERM 381 915737 - 915724 - g 81 -8.1 -4.26076 | TTACTCCTATGAAAA GCAGC TCGA GCTGC TCCAGAATGTCAAGA TERM 382 915803 - 915785 - g 70 -6.7 -4.16842 | gap 1, overlap 915786 GCCACCTCTAAGAAA CGC-CTGG AGCT CCAGCGCG CCAGGCTTGCACAGA Mthe_0849 915620 - 916312 + | phage shock protein A, PspA Mthe_0850 916309 - 916587 + | hypothetical protein Mthe_0851 917156 - 916584 - | hypothetical protein Mthe_0852 918019 - 917156 - | heat shock protein HtpX TERM 383 918382 - 918372 - H 71 -2.6 -4.90217 | opp_overlap 918367 918372, overlap 918363 TAAATATATCAAAAA TTAA TAT TTAA TTTTATTGATTATAT Mthe_0853 919888 - 920373 + | 3-isopropylmalate dehydratase, small subunit Mthe_0854 920370 - 921200 + | hypothetical protein Mthe_0855 921197 - 922168 + | isopropylmalate/isohomocitrate dehydrogenases TERM 384 925625 - 925600 - T 93 -14.7 -3.49475 | opp_overlap 925619 925620 GGGAGTGGCAGAGAA GGGCAGGGTGC TCAT GCATCCTGCCC CGCAGATTTTACAGC Mthe_0857 927328 - 925652 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 385 926549 - 926576 + g 75 -6.8 -4.4768 | overlap 926539 GCTGATGCCGGGTAT GGTCCTCCCCGG AATT CCCTGGAGGTCC TTTGTTGTGTTCATG Mthe_0858 928161 - 927328 - | binding-protein-dependent transport systems inner membrane component TERM 386 927562 - 927526 - G 83 -10.2 -3.96531 | gap 1, opp_overlap 927520 927526, overlap 927549 TGAGACACCCAGAAA TGCCAGGCCTGCC-TCC ATGA GAACAGCACGCCTGGCA TCCTGTATCATTATG Mthe_0859 929170 - 928151 - | binding-protein-dependent transport systems inner membrane component TERM 387 929408 - 929452 + r 71 -8.9 -3.61268 | opp_overlap 929413 929418, overlap 929410 GATCAATTTTTGGGG AATTATTCAACACAGCA CACGCGAGCAA TGCTGTGTTGAATAATG TTTGAGAATTCGATA TERM 388 929410 - 929450 + r 82 -11.5 -3.38314 | opp_overlap 929413 929418, overlap 929408 TCAATTTTTGGGGAA TTATTCAACACAGCA CACGCGAGCAA TGCTGTGTTGAATAA TGTTTGAGAATTCGA TERM 389 929521 - 929508 - R 73 -5.3 -4.58283 | CAATCCTGGCAAAAA TCGAT AGCA ATCGA CTCCAGAGCTATTAG Mthe_0860 930625 - 929756 - | transposase, IS4 family protein Mthe_0861 930709 - 931404 + | Ion transport protein Mthe_0862 933051 - 931411 - | CTP synthetase TERM 390 932673 - 932684 + g 77 -3.6 -5.02502 | CGGTTCTCGATACCT GGCG TATG CGTC TTTTTATCTCGTCTG Mthe_0863 933861 - 933073 - | hypothetical protein Mthe_0864 934075 - 933887 - | hypothetical protein Mthe_0865 934619 - 934275 - | peptidyl-tRNA hydrolase Mthe_0866 935662 - 934628 - | hypothetical protein Mthe_0867 937998 - 935662 - | HAE1 family efflux transporter TERM 391 936819 - 936839 + g 71 -9.7 -3.50572 | ATCTCACAGCTCTGC CAGTGGCTG TCT CAGCAACTG TTGTCTCAGATGCAT TERM 392 937079 - 937095 + g 81 -3.6 -5.1675 | opp_overlap 937059, overlap 937080 GGCGCTGTATGGGCC ACGGTC TCAAC GACCGC TTTTTTAATAGATCC TERM 393 938435 - 938402 - g 81 -13.9 -2.93901 | ATGTCAGCAAGGAGA TCAGCACGATCATGG CGGC CCTCGATCGCGCTGA AAGAGCGCTCTCAGA Mthe_0868 938014 - 938592 + | hypothetical protein Mthe_0869 939166 - 938879 - | hypothetical protein TERM 394 939249 - 939265 + r 75 -5.3 -4.68724 | AACACACATATGATT TAAATTA TAA TAATTTA TTTTCTGTTAAATAA Mthe_0870 939926 - 939315 - | hypothetical protein TERM 395 940572 - 940587 + r 76 -9 -3.85603 | opp_overlap 940560 940571, overlap 940571 ATCGGAACTAACAGT GCCTGA GGGA TCAGGC TATTTATTTGGTGAC Mthe_0871 941654 - 941262 - | hypothetical protein TERM 396 941719 - 941745 + H 71 -9.4 -3.53343 | opp_overlap 941720, overlap 941720 ACGTGGAGCTGAGAG ACGATGGCGAAC CCG GTTCGCGATCGG TTTGGAGAGAAGCTT TERM 397 941720 - 941744 + H 81 -12.9 -2.71791 | opp_overlap 941720, overlap 941719 CGTGGAGCTGAGAGA CGATGGCGAAC CCG GTTCGCGATCG GTTTGGAGAGAAGCT TERM 398 941744 - 941720 - H 81 -12.9 -2.89564 | opp_overlap 941719 941720 CGTGGAGCTGAGAGA CGATGGCGAAC CCG GTTCGCGATCG GTTTGGAGAGAAGCT Mthe_0872 941790 - 942938 + | aminotransferase, class V TERM 399 943806 - 943796 - g 76 -3.2 -5.00616 | overlap 943799 CTGGGTTGGAAAAAA CACC TAC GATG CAGCCGTCATAAATG Mthe_0873 943011 - 943985 + | hypothetical protein Mthe_0874 943982 - 945154 + | hypothetical protein TERM 400 945243 - 945226 - T 72 -11.3 -2.73364 | opp_overlap 945238 GCGGCATGTGAACTA CCCTACC TGAA GGTAGGG CTTCCCACTTCATAG Mthe_0875 946363 - 945656 - | hypothetical protein Mthe_0876 946610 - 946344 - | PRC-barrel domain-containing protein Mthe_0877 947187 - 949580 + | Pyrrolo-quinoline quinone TERM 401 950857 - 950843 - g 74 -7 -4.32034 | opp_overlap 950843 CCATCAGCATGAAAA GCGCGC TGG GGGCGC TGATATCATTCGCAT TERM 402 951731 - 951744 + G 74 -6.7 -4.27512 | opp_overlap 951730 GCTTCTCGAATGCAT CCTCT CTGG AGAGG TTCTTTGTTCTGAAC Mthe_0878 949594 - 955032 + | cobaltochelatase Mthe_0879 955457 - 955936 + | AsnC family transcriptional regulator Mthe_0880 955933 - 957123 + | aminotransferase, class I and II Mthe_0881 957135 - 957755 + | CDP-alcohol phosphatidyltransferase Mthe_0882 957860 - 958273 + | hypothetical protein Mthe_0883 958476 - 958877 + | hypothetical protein Mthe_0884 959681 - 959013 - | SPP-like hydrolase radA 960646 - 959678 - | DNA repair and recombination protein RadA Mthe_0886 961795 - 960680 - | replication factor A Mthe_0887 963529 - 961826 - | ABC transporter related metG 965558 - 963549 - | methionyl-tRNA synthetase TERM 403 963735 - 963749 + g 78 -7.1 -4.65838 | CATCTTCGCGATTCC CGCCA CAATC TGGCG TTTTTCACCTATGTC Mthe_0889 965721 - 966113 + | transcriptional regulator, TrmB Mthe_0890 966380 - 967486 + | cell division protein FtsZ Mthe_0891 967507 - 967821 + | hypothetical protein Mthe_0892 969080 - 968073 - | thiamine biosynthesis protein Mthe_0893 969631 - 970056 + | hypothetical protein Mthe_0894 971019 - 970057 - | radical SAM domain-containing protein secD 972856 - 971180 - | preprotein translocase subunit SecD Mthe_0896 973743 - 972853 - | preprotein translocase subunit SecF Mthe_0897 973967 - 974545 + | nitroreductase Mthe_0898 974555 - 976093 + | ELP3 family histone acetyltransferase Mthe_0899 976313 - 976771 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Mthe_0900 976782 - 978518 + | aldehyde ferredoxin oxidoreductase Mthe_0901 978636 - 979847 + | nucleotidyl transferase TERM 404 980512 - 980485 - f 83 -12.8 -3.01041 | AACTTGAAGGACATA CTGGTTGCTGAA ATCA TTCAGCATCCAG AAGTGCATAGCAGGA Mthe_0902 981365 - 981616 + | hypothetical protein Mthe_0903 983205 - 981817 - | dihydrolipoamide dehydrogenase Mthe_0904 983532 - 983389 - | YHS domain-containing protein Mthe_0905 985956 - 983548 - | heavy metal translocating P-type ATPase Mthe_0906 986315 - 985953 - | hypothetical protein Mthe_0907 986867 - 986376 - | rubredoxin-type Fe(Cys)4 protein Mthe_0908 987149 - 986868 - | glutaredoxin TERM 405 987053 - 987031 - G 71 -8.4 -3.84185 | opp_overlap 987051 TCCACGTAAACATAA TCGTAGCTCA CGC CGAGCTTCGA GAGAAGATCCCTCGT Mthe_0909 987723 - 988505 + | acetolactate decarboxylase Mthe_0910 988759 - 989115 + | hypothetical protein Mthe_0911 989220 - 989879 + | HhH-GPD family protein Mthe_0912 991208 - 990219 - | 4Fe-4S ferredoxin, iron-sulfur binding Mthe_0913 993211 - 991205 - | formate dehydrogenase, alpha subunit Mthe_0914 994145 - 993264 - | ferredoxin--NADP(+) reductase subunit alpha Mthe_0915 996891 - 994129 - | formate dehydrogenase, alpha subunit Mthe_0916 998903 - 997221 - | thermosome Mthe_0917 999841 - 1000935 + | hypothetical protein TERM 406 1001645 - 1001623 - g 80 -4.8 -5.13344 | opp_overlap 1001644, overlap 1001627 1001634 AGATCAACAGAAAAA CCAGCTAC ACAGCCA GGAGCTGG GTTGACATCAACCGT TERM 407 1001815 - 1001856 + G 88 -13.9 -3.35798 | opp_overlap 1001830, overlap 1001816 1001818 1001830 TGGCCATGGGCGCCA CCAGGCTCTCGATAATGAA GATA TTCATTCTTGAGAGCCTGA TTCTCGCTCCACCAT TERM 408 1001816 - 1001855 + G 90 -17.4 -2.61264 | opp_overlap 1001830, overlap 1001815 1001818 1001830 GGCCATGGGCGCCAC CAGGCTCTCGATAATGAA GATA TTCATTCTTGAGAGCCTG ATTCTCGCTCCACCA TERM 409 1001818 - 1001853 + G 83 -14.2 -2.8474 | opp_overlap 1001830, overlap 1001816 1001815 1001830 CCATGGGCGCCACCA GGCTCTCGATAATGAA GATA TTCATTCTTGAGAGCC TGATTCTCGCTCCAC Mthe_0918 1000932 - 1002101 + | hypothetical protein TERM 410 1002433 - 1002405 - g 73 -10.9 -3.42503 | TGCCAAGATGCAGAA GGGTGGAGTCATC ATG GACGTCACCACCC CTGAGCAGGCCATGA TERM 411 1003042 - 1002998 - g 71 -10.7 -3.25823 | gap 1, opp_overlap 1002996 1002998, overlap 1002958 CCGGTGGCATAGCAA CACCAGCAGACGCCGCTCTG ATGATG CAGCTCGGCG-CTGATGGTG TGTTCGTCGGCTCCG Mthe_0919 1002340 - 1003233 + | pyridoxine biosynthesis protein Mthe_0920 1003268 - 1003828 + | SNO glutamine amidotransferase Mthe_0921 1003830 - 1004186 + | hypothetical protein Mthe_0922 1004430 - 1005431 + | radical SAM domain-containing protein TERM 412 1005594 - 1005565 - f 74 -9.3 -3.646 | overlap 1005566 CTGAAGGACATACAA GCTGGTTGCTGAA ATCA TTCAGCATCCAGA AGTGCATAGCAGGAC TERM 413 1005593 - 1005566 - f 81 -12.8 -2.78278 | overlap 1005565 TGAAGGACATACAAG CTGGTTGCTGAA ATCA TTCAGCATCCAG AAGTGCATAGCAGGA TERM 414 1006584 - 1006623 + G 74 -2.3 -5.10601 | opp_overlap 1006611, overlap 1006611 CAGGCCTGTTCTCAT TCTGAGGAGCTC-GAAGAT CGCT ATATACTGAGCTC-TCAGA TTTTTATAATTTTAT Mthe_0923 1005757 - 1006614 + | UspA domain-containing protein TERM 415 1006660 - 1006647 - T 70 -9.5 -3.25102 | opp_overlap 1006646, overlap 1006645 ATTTTATGGACAACA GCCCG GGTG CGGGC GTGTGTCGCACAAAC TERM 416 1006801 - 1006785 - T 75 -3.7 -5.07567 | opp_overlap 1006796, overlap 1006796 1006800 GCAGACCCCAAAAAA TGTGG TCACAAG CCACA TCTGGCGCCCCAGAT TERM 417 1006822 - 1006796 - T 73 -9.5 -3.30903 | gap 1, opp_overlap 1006796, overlap 1006785 1006800 AAAATGTGGTCACAA GCC-ACATCTGG CGCC CCAGATGCAGGC TTTCTGCATAATGCG Mthe_0924 1007198 - 1006926 - | hypothetical protein Mthe_0925 1007265 - 1007609 + | hypothetical protein TERM 418 1007638 - 1007621 - T 71 -6.9 -4.24726 | opp_overlap 1007621 1007622, overlap 1007613 1007622 ATAAGAACCTGAAAA TCCGGAG GGTG CTCCGGG TTGTGAAATAGAATG TERM 419 1007637 - 1007622 - T 73 -10.4 -3.13751 | opp_overlap 1007621 1007622, overlap 1007613 1007621 TAAGAACCTGAAAAT CCGGAG GGTG CTCCGG GTTGTGAAATAGAAT radB 1008645 - 1007980 - | DNA repair and recombination protein RadB TERM 420 1008217 - 1008245 + g 74 -10.3 -3.615 | overlap 1008216 1008220 TCTGGCGATCTCCTG GAGCTCTGAGAGC TGT GCTGTCAGAGATC TCTTTATCTGGCGGT TERM 421 1008742 - 1008767 + r 74 -6.9 -4.431 | gap 1, overlap 1008743 CTGGTTGTTTTCCAG CGCGCATGCATG GAA CATGCAT-CGCA TTTTCTCAATAAATG TERM 422 1008743 - 1008766 + r 73 -10.4 -3.25378 | gap 1, overlap 1008742 TGGTTGTTTTCCAGC GCGCATGCATG GAA CATGCAT-CGC ATTTTCTCAATAAAT Mthe_0927 1009727 - 1008810 - | ribonuclease Z Mthe_0928 1010228 - 1009743 - | hypothetical protein ileS 1013424 - 1010275 - | isoleucyl-tRNA synthetase TERM 423 1012521 - 1012543 + g 80 -5.4 -4.87665 | CGATATCTCTCTGCG CTGGCACCAG ATC CTGGAGCGGG TTTTTGTACGTCAGC Mthe_0930 1016105 - 1013565 - | magnesium-translocating P-type ATPase Mthe_0931 1016481 - 1016233 - | hypothetical protein Mthe_0932 1016717 - 1016505 - | hypothetical protein Mthe_0933 1016729 - 1018141 + | histidyl-tRNA synthetase Mthe_0934 1019324 - 1018275 - | peptidase M42 family protein TERM 424 1018300 - 1018337 + g 76 -8.9 -4.07124 | opp_overlap 1018296 CGTCTGAAGTATCTA GGGGCGGTCTCGAGCGC CCTG GCGATCAGCTCCGCCCC TTTATCTAGATCCTC TERM 425 1019077 - 1019057 - G 75 -11.1 -3.35679 | CCCTCTGATTCAGAA GCGTCTGGT CGA ACCAGCCGC CGATCTTCACAAAGT TERM 426 1019166 - 1019179 + g 70 -9.5 -3.40403 | TGCTATCATCACCGA GGGGC TCTT GCCCC TTCTGGTCGCGACCA Mthe_0935 1020868 - 1019339 - | beta-ribofuranosylaminobenzene 5'-phosphate synthase Mthe_0936 1020938 - 1022197 + | hydroxymethylglutaryl-CoA reductase, degradative Mthe_0937 1022194 - 1023012 + | prephenate dehydratase TERM 427 1023109 - 1023135 + T 91 -10.9 -4.4267 | opp_overlap 1023106 ACCGCTACACTATCG GCGCATCAGCA CTGAC TGCTCATGCGC TTTTAGGTTTTAAAC Mthe_0938 1024297 - 1023590 - | hypothetical protein TERM 428 1024211 - 1024253 + g 71 -11.3 -2.88249 | gap 1, overlap 1024227 1024235 GATCGCAGACATGCC CTCGCAGAGTGTGGTGCAGC CCTC GCTCTCCCACGC-CTGCGAG TCTGTGAGGGCTGTG Mthe_0939 1026760 - 1024616 - | TPR repeat-containing protein TERM 429 1027588 - 1027608 + G 74 -9.7 -3.6968 | AGGAGTTTGAGTATG CATCCGCTC TCA GAGGGGATG TTGTTGAGGTTGTGA Mthe_0940 1026993 - 1028246 + | UbiD family decarboxylase Mthe_0941 1028909 - 1028352 - | beta-lactamase domain-containing protein Mthe_0942 1029429 - 1029022 - | nucleic acid binding, OB-fold, tRNA/helicase-type Mthe_0943 1030113 - 1029721 - | hypothetical protein TERM 430 1031075 - 1031062 - g 71 -9.5 -3.48276 | overlap 1031046 GGTCGCTGGATACAA CGGCC TTGA GGCCG GGATGGGTGTGATTA Mthe_0944 1030565 - 1031539 + | glycosyl transferase family protein Mthe_0945 1031551 - 1032393 + | lipopolysaccharide biosynthesis Mthe_0946 1033277 - 1033852 + | hypothetical protein Mthe_0947 1033897 - 1034136 + | hypothetical protein Mthe_0948 1034254 - 1034859 + | acylphosphatase TERM 431 1035283 - 1035267 - g 73 -10.9 -3.40403 | GCTGGGCGAGCAGAA CCTTGCT GTG AGCAAGG AGACTCTGGCAGTGA Mthe_0949 1034914 - 1035603 + | acylphosphatases-like Mthe_0950 1035658 - 1036305 + | acylphosphatases-like TERM 432 1036729 - 1036713 - g 73 -10.9 -3.40403 | GCTGGGCGAGCAGAA CCTTGCT GTG AGCAAGG AGACTCTGGCAGTGA Mthe_0951 1036360 - 1036986 + | acylphosphatases-like Mthe_0952 1037142 - 1038356 + | UDP-glucose 6-dehydrogenase Mthe_0953 1038344 - 1039189 + | dTDP-4-dehydrorhamnose reductase Mthe_0954 1039186 - 1040250 + | glucose-1-phosphate thymidyltransferase TERM 433 1040404 - 1040379 - g 78 -6.9 -4.63218 | gap 1, overlap 1040399 GCGTTCGGAATAAAA GAGAGGTTCGTC CAG GAC-AACCACTC TCGCTCGAGAAGGGG Mthe_0955 1040250 - 1040813 + | dTDP-4-dehydrorhamnose 3,5-epimerase Mthe_0956 1040810 - 1041844 + | dTDP-glucose 4,6-dehydratase Mthe_0957 1041880 - 1042098 + | hypothetical protein TERM 434 1042752 - 1042776 + G 71 -10 -3.48684 | gap 1, overlap 1042760 1042761 1042763 TTGCTCTTCCACGTG CCG-GCCGGTC AGGA GACTGGCGCGG TTCTCCTGCTTCTCG Mthe_0958 1042374 - 1043927 + | polysaccharide biosynthesis protein Mthe_0959 1043924 - 1045285 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Mthe_0960 1045289 - 1046545 + | polysaccharide pyruvyl transferase Mthe_0961 1046645 - 1047553 + | glycosyl transferase family protein TERM 435 1047849 - 1047898 + F 93 -14.5 -3.42056 | gap 1, overlap 1047850 1047853 TTCAGGTCTCAGAGT TATAG-GGCAGTGTGCCGAAATTG CTG TAATTTCGGCACACTGCCACTGGC TTATGCATTGAGAAT TERM 436 1047850 - 1047897 + F 100 -18 -2.64912 | gap 1, overlap 1047849 1047853 TCAGGTCTCAGAGTT ATAG-GGCAGTGTGCCGAAATTG CTG TAATTTCGGCACACTGCCACTGG CTTATGCATTGAGAA TERM 437 1047853 - 1047894 + F 100 -21.9 -2.61602 | gap 1, overlap 1047850 1047849 GGTCTCAGAGTTATA G-GGCAGTGTGCCGAAATTG CTG TAATTTCGGCACACTGCCAC TGGCTTATGCATTGA TERM 438 1048094 - 1048140 + G 71 -11.5 -2.87132 | gap 2 TCACGACTGTGAGGA GC-G-CGCGGTGGATGCACGCCG CCT CTGCCAGCATCCGCCGCGACAGC TCTCTCCCGCACGGC Mthe_0962 1048000 - 1048305 + | hypothetical protein TERM 439 1048742 - 1048730 - g 86 -3.5 -5.40072 | opp_overlap 1048730 CGTGTCGCAAAAAAA TAAAA AAA TTTTA TTATATGTAATTATA TERM 440 1049234 - 1049246 + G 71 -4.9 -4.64048 | overlap 1049242 CATGGGTTGGTTGGG TATGA TAT TCATA TTTATTTATATGATA Mthe_0963 1048293 - 1049456 + | putative transmembrane protein TERM 441 1049854 - 1049868 + G 81 -3.6 -5.24129 | opp_overlap 1049867, overlap 1049867 AGAAGAGGATACTTC GTTATT TTT AATAGC TTTTTTATAAAAAGA Mthe_0964 1049449 - 1050342 + | glycosyl transferase family protein Mthe_0965 1050339 - 1051166 + | glycosyl transferase family protein TERM 442 1051813 - 1051794 - g 100 -4.2 -7.14698 | overlap 1051795 AAAAAAAAAAAAAAA GCTCAAGC CATG GCTCGAGA AGAGGTGGTGTATAG TERM 443 1051812 - 1051795 - g 86 -7.7 -4.76465 | overlap 1051794 AAAAAAAAAAAAAAG CTCAAGC CATG GCTCGAG AAGAGGTGGTGTATA Mthe_0966 1051353 - 1051832 + | transposase Mthe_0967 1051858 - 1052481 + | transposase Mthe_0968 1052595 - 1053137 + | methyltransferase type 12 Mthe_0969 1054062 - 1053193 - | transposase, IS4 family protein TERM 444 1054918 - 1054944 + H 71 -9.4 -3.51934 | opp_overlap 1054918, overlap 1054916 GCCCGTAAAAACGGA GTCCCTTTCGGC TGG GTCGGAATGGAC TGTTTCTACGGCGAA TERM 445 1055430 - 1055468 + H 82 -12.5 -3.15861 | gap 1, opp_overlap 1055432 ACTCGCAGATTATGA GACCCGATCGTGGAGATG CTGG CATCACCACG-TCAGGTC TTCCTCGCAATGCTC TERM 446 1055466 - 1055432 - H 76 -11.5 -2.84634 | gap 1, opp_overlap 1055430 TCGCAGATTATGAGA CCCGATCGTGGAGATG CTGG CATCACCACG-TCAGG TCTTCCTCGCAATGC Mthe_0972 1057487 - 1058776 + | periplasmic binding protein Mthe_0973 1059161 - 1059409 + | hypothetical protein TERM 447 1059850 - 1059818 - T 72 -11.2 -2.53822 | overlap 1059817 1059815 1059838 GTCAGTGTAGAAGAG CGGTCTGCGCCCCT CAATC AGGAGCGGAGGCCG GACCTCAAGGTAATG TERM 448 1060024 - 1060035 + T 71 -4.4 -4.70583 | AAACATGGTCTTCAG CATC GCAA GATG TTTTATGTTACTGCA Mthe_0975 1061547 - 1060609 - | ornithine carbamoyltransferase Mthe_0976 1061921 - 1061544 - | molydopterin dinucleotide-binding region Mthe_0977 1063142 - 1061922 - | tungsten formylmethanofuran dehydrogenase subunit B Mthe_0978 1063610 - 1063152 - | Fe-S cluster domain-containing protein TERM 449 1063931 - 1063921 - R 80 -2.6 -5.47159 | opp_overlap 1063921 TCTCAATACAAAAAA TTTA ATA TAAA TATGATGCTCTTGTC Mthe_0979 1064412 - 1063945 - | hypothetical protein Mthe_0980 1065929 - 1064607 - | CoB--CoM heterodisulfide reductase Mthe_0981 1066731 - 1065979 - | heterodisulfide reductase, subunit E Mthe_0982 1067035 - 1067451 + | hypothetical protein Mthe_0983 1067635 - 1067426 - | hypothetical protein TERM 450 1067506 - 1067486 - G 73 -8.9 -3.80114 | overlap 1067487 CACTAAGTCATTAAA TGGAACGGG AAC CCCGTCCCT CGTAATCGCCACGGT TERM 451 1067505 - 1067487 - G 75 -12.4 -2.87586 | overlap 1067486 ACTAAGTCATTAAAT GGAACGGG AAC CCCGTCCC TCGTAATCGCCACGG Mthe_0984 1067790 - 1067641 - | hypothetical protein Mthe_0985 1068416 - 1069267 + | hypothetical protein Mthe_0986 1070528 - 1069371 - | DNA ligase domain-containing protein Mthe_0987 1071883 - 1070597 - | metalloenzyme domain-containing protein Mthe_0988 1073061 - 1071883 - | bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase Mthe_0989 1074043 - 1073240 - | tRNA pseudouridine synthase A TERM 452 1074072 - 1074060 - R 80 -4.8 -5.02323 | GCATCAGAAATAAAA TGCG GACTT CGCA GGGGACGTCGCGGCC Mthe_0990 1075415 - 1074144 - | homoaconitate hydratase family protein Mthe_0991 1076938 - 1075697 - | amidohydrolase TERM 453 1077310 - 1077293 - gH 75 -4.1 -4.87665 | overlap 1077295 GGCGATCGATAAAAA CGCTCAT GGTC ATGAGTG CAGATCTCCAAGCTT Mthe_0992 1077130 - 1078488 + | THUMP domain-containing protein Mthe_0993 1078463 - 1078753 + | 50S ribosomal protein L21e Mthe_0994 1078757 - 1079104 + | RNA polymerase Rpb4 Mthe_0995 1079112 - 1079717 + | hypothetical protein Mthe_0996 1079791 - 1080540 + | dimethyladenosine transferase TERM 454 1080645 - 1080619 - T 74 -2.8 -5.04385 | overlap 1080622 GACATCGTGAAAAAA GAACGTGCGCGA TTT TCAAGCTCGATC ACCACAGCGCATATC Mthe_0997 1081891 - 1080644 - | cytochrome c biogenesis protein, transmembrane region Mthe_0998 1082406 - 1081891 - | hypothetical protein TERM 455 1082370 - 1082338 - G 72 -11.4 -3.07895 | gap 1 TCCAGCGCCAACAGA GTGCTCT-GCCCCCA TCGC TGAGAGCGAGAGCAC CAGCAGAACCACTAT TERM 456 1083104 - 1083092 - g 76 -10.5 -3.65522 | GAGCGATCTGAAGAA CGCGC TCT GCGCG AAGAACTACGATGTC TERM 457 1083203 - 1083185 - g 79 -13.2 -2.71744 | overlap 1083182 1083187 CACCACCATATATCA GAGCGAGA ACG TCTCGCTC TACCAGATCAACTCA Mthe_0999 1082754 - 1083374 + | hypothetical protein Mthe_1000 1083515 - 1084273 + | histone deacetylase superfamily protein Mthe_1001 1084382 - 1085785 + | cobyrinic acid a,c-diamide synthase Mthe_1002 1087171 - 1085939 - | glutamyl-tRNA(Gln) amidotransferase subunit D Mthe_1003 1087910 - 1087182 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Mthe_1004 1088008 - 1089264 + | adenosylhomocysteinase Mthe_1005 1089267 - 1090352 + | hypothetical protein Mthe_1006 1090353 - 1091393 + | putative RNA methylase Mthe_1007 1091457 - 1092266 + | hypothetical protein Mthe_1008 1093210 - 1092350 - | putative phosphoserine phosphatase TERM 458 1096418 - 1096394 - g 71 -8.6 -3.90318 | opp_overlap 1096396, overlap 1096396 GGATGAGGCGAGAAA CAGCACCATG CTTCT CATGGTGCTC TTCGAGAACTTGCAG TERM 459 1096396 - 1096416 + G 72 -11.2 -3.03159 | opp_overlap 1096394 1096396 ATGAGGCGAGAAACA GCACCATG CTTCT CATGGTGC TCTTCGAGAACTTGC TERM 460 1096416 - 1096396 - g 77 -11.2 -3.54 | opp_overlap 1096396, overlap 1096394 ATGAGGCGAGAAACA GCACCATG CTTCT CATGGTGC TCTTCGAGAACTTGC Mthe_1009 1094190 - 1096685 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC Mthe_1010 1097756 - 1096830 - | MscS mechanosensitive ion channel Mthe_1011 1098048 - 1098791 + | anaerobic ribonucleoside-triphosphate reductase activating protein Mthe_1012 1098788 - 1099336 + | hypothetical protein Mthe_1013 1099489 - 1099647 + | hypothetical protein Mthe_1014 1099644 - 1100096 + | hypothetical protein Mthe_1015 1100078 - 1100629 + | histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase HisB Mthe_1016 1100902 - 1101360 + | hypothetical protein TERM 461 1101689 - 1101699 + G 77 -4.6 -4.93296 | CGTGAACCTTGGATC CGGC GGG GCTG TTTTTGTGATGATGG Mthe_1017 1101378 - 1102118 + | cobalamin 5'-phosphate synthase Mthe_1018 1102118 - 1102720 + | putative nucleotidyltransferase TERM 462 1102852 - 1102872 + G 78 -11.9 -3.30124 | CAGAACCCTATGAGG CTTCCTGAG CTG CTCAGGGAG TTCTGCACGCTGAGG Mthe_1019 1102717 - 1103079 + | hypothetical protein Mthe_1020 1103250 - 1104017 + | hypothetical protein Mthe_1021 1104075 - 1104806 + | metallophosphoesterase Mthe_1022 1105972 - 1104824 - | hypothetical protein Mthe_1023 1106581 - 1107450 + | transposase, IS4 family protein TERM 463 1107626 - 1107641 + T 76 -9 -3.85603 | opp_overlap 1107614 1107625, overlap 1107625 ATCGGAACTAACAGT GCCTGA GGGA TCAGGC TATTTATTTGGTGAC Mthe_1024 1109195 - 1108026 - | pentapeptide repeat-containing protein Mthe_1025 1109871 - 1109200 - | hypothetical protein Mthe_1026 1110217 - 1110474 + | transcription factor TFIIS Mthe_1027 1110537 - 1111271 + | DNA polymerase sliding clamp TERM 464 1111894 - 1111867 - g 71 -10.6 -3.19659 | gap 1, opp_overlap 1111866, overlap 1111865 GAGATCCATAAGAGA CGAGCTC-GCATC ATC GAAGCGGAGCTCG ATGGTGGATCTCGGT Mthe_1028 1111268 - 1112260 + | DNA primase large subunit Mthe_1029 1113608 - 1112343 - | 3-phosphoshikimate 1-carboxyvinyltransferase Mthe_1030 1115273 - 1113723 - | hypothetical protein TERM 465 1116179 - 1116162 - H 71 -2.8 -4.88736 | CAGCACGCATAAAAA CTTAAT TGTTCT ATTAAG TGACACTATTAATAT Mthe_1032 1116265 - 1116657 + | hypothetical protein Mthe_1033 1117424 - 1116678 - | ABC transporter related Mthe_1034 1118344 - 1117415 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Mthe_1035 1119161 - 1118331 - | binding-protein-dependent transport systems inner membrane component Mthe_1036 1120084 - 1119158 - | binding-protein-dependent transport systems inner membrane component Mthe_1037 1120912 - 1120142 - | methyltransferase type 12 Mthe_1038 1122483 - 1120909 - | extracellular solute-binding protein TERM 466 1121459 - 1121475 + g 77 -3.6 -5.06451 | overlap 1121460 CTGTAGCCTGCCTCC TCCAGG CTCTC CCTGGC TTTTTTGGGATCATA Mthe_1039 1124647 - 1123043 - | transposase Mthe_1040 1125813 - 1124812 - | dienelactone hydrolase Mthe_1041 1126721 - 1125816 - | transport system permease protein Mthe_1042 1128087 - 1127023 - | periplasmic binding protein Mthe_1043 1128957 - 1128421 - | adenylylsulfate kinase TERM 467 1128553 - 1128568 + g 86 -6.8 -5.07275 | gap 1, overlap 1128553 CACGCCGGGGACCTT GGC-GCC TGA GGCGGCC TTTTTGTATATCTCC Mthe_1044 1130019 - 1129423 - | response regulator receiver domain-containing protein Mthe_1045 1130628 - 1130224 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Mthe_1046 1132908 - 1130872 - | DNA mismatch repair protein MutS domain-containing protein TERM 468 1131249 - 1131268 + g 86 -7.8 -4.79683 | overlap 1131245 1131267 CTGTTATCGCTTCCA GCTCGTCC GCGA GCACGAGC TTTCTTTTCTCGGTT Mthe_1047 1132993 - 1133868 + | tubulin/FtsZ domain-containing protein Mthe_1048 1134996 - 1134019 - | tyrosyl-tRNA synthetase Mthe_1049 1135540 - 1135253 - | hypothetical protein TERM 469 1135955 - 1135974 + G 77 -4.2 -4.84914 | overlap 1135958 TGCTATCGTGTTCGT GATCTTCG ATGT CGAGGTTC TTTTCTTGTATCCAT Mthe_1050 1135734 - 1136138 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Mthe_1051 1136129 - 1136701 + | NADH-quinone oxidoreductase, B subunit Mthe_1052 1137250 - 1138422 + | NADH dehydrogenase (ubiquinone) Mthe_1053 1138435 - 1139487 + | respiratory-chain NADH dehydrogenase, subunit 1 TERM 470 1139966 - 1139948 - g 76 -8.8 -4.05004 | overlap 1139949 TGAGGAGAAGAAGAA GGCTGCTG CGG CAGCAGCA AAGGAGAAGGCCGCA TERM 471 1139965 - 1139949 - g 76 -12.3 -3.02279 | overlap 1139948 GAGGAGAAGAAGAAG GCTGCTG CGG CAGCAGC AAAGGAGAAGGCCGC Mthe_1054 1139499 - 1140041 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Mthe_1055 1140164 - 1140454 + | NADH dehydrogenase subunit J Mthe_1056 1140447 - 1140716 + | F(420)H(2) dehydrogenase, subunit FpoJ Mthe_1057 1140773 - 1141051 + | NADH-ubiquinone oxidoreductase, chain 4L Mthe_1058 1141054 - 1143012 + | proton-translocating NADH-quinone oxidoreductase, chain L TERM 472 1143665 - 1143653 - g 73 -9.1 -3.85698 | GCCGGGGCTGATAAA CGCGA TAT TCGCG GGGCTTCTATTCGGC Mthe_1059 1143009 - 1144517 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 473 1145954 - 1146002 + G 91 -7.4 -4.96773 | gap 2, overlap 1145959 CGGACGGATTCTTCA ACTGGGCGATGC--AGGCGGCAGC TGC GCTGCTGCCTTAGCGTCGCTTTGC TTTATTTTTAATTCA TERM 474 1145959 - 1145997 + G 100 -14.7 -4.35747 | gap 2, overlap 1145954 GGATTCTTCAACTGG GCGATGC--AGGCGGCAGC TGC GCTGCTGCCTTAGCGTCGC TTTGCTTTATTTTTA Mthe_1060 1144519 - 1145991 + | proton-translocating NADH-quinone oxidoreductase, chain N Mthe_1061 1146698 - 1147021 + | HesB/YadR/YfhF-family protein Mthe_1062 1147046 - 1147957 + | NAD-dependent epimerase/dehydratase Mthe_1063 1147963 - 1149192 + | NAD-dependent epimerase/dehydratase TERM 475 1149556 - 1149574 + G 91 -11.8 -4.10007 | opp_overlap 1149558 TCAGGGAGAGCATGA TATCCAGG CAG CCTGGATA TTTTAGGAGGCTTGT Mthe_1064 1149189 - 1150280 + | glycosyl transferase, group 1 Mthe_1065 1150288 - 1151073 + | ABC-2 type transporter TERM 476 1151895 - 1151946 + G 72 -2.3 -4.93877 | gap 2, opp_overlap 1151915 AAGTTCGTGGACAAA TACGGATGTCCCAACGAGAACTTCG TAGC CGGAGATC-CGCTGAGG-GTCCGTA TTTTCTTTGATGCAC Mthe_1066 1151073 - 1152272 + | ABC transporter related Mthe_1067 1153049 - 1152345 - | methyltransferase type 11 Mthe_1068 1154304 - 1153051 - | methyltransferase type 11 TERM 477 1154240 - 1154227 - G 71 -5.9 -4.32049 | overlap 1154218 CAGAAGGTACGAAAA GCCGC ACGA GCAGC AGAGCGATCCATGGA Mthe_1069 1154521 - 1156248 + | hypothetical protein Mthe_1070 1156285 - 1157805 + | hypothetical protein Mthe_1071 1157982 - 1158677 + | rhodanese domain-containing protein Mthe_1073 1163362 - 1159577 - | glycosyl transferase, group 1 Mthe_1072 1158723 - 1159631 + | hypothetical protein TERM 478 1159828 - 1159816 - GT 75 -6.2 -4.57569 | opp_overlap 1159807 CCACCTCTCGAAAAA CGGG TATGT CCCG GGCGATGATCGGCAT TERM 479 1163147 - 1163161 + gT 70 -10 -3.17146 | overlap 1163145 1163143 ACGTACGGGTCCTGG CGCGTA CCA TACGCG TATGTTCTCCGGCGG Mthe_1074 1164677 - 1163367 - | methyltransferase type 11 Mthe_1075 1166892 - 1164658 - | hypothetical protein TERM 480 1166465 - 1166454 - G 85 -2.2 -5.56573 | ATAAATAAACAAAAA CAAC AGAT GTCG ATGCAATTAAAGATG Mthe_1077 1168168 - 1167272 - | glycosyl transferase family protein Mthe_1078 1169005 - 1168184 - | xylose isomerase domain-containing protein TERM 481 1168533 - 1168557 + g 78 -6.6 -4.5477 | gap 1, overlap 1168526 1168525 GCATCATTCTTGTGC TCAAGGTT-CT CGAG AGCAACCTTGA TTTTGTGCTCTCTTG Mthe_1079 1170033 - 1169002 - | NAD-dependent epimerase/dehydratase Mthe_1080 1170966 - 1170052 - | UTP-glucose-1-phosphate uridylyltransferase GalU Mthe_1081 1172218 - 1170941 - | UDP-glucose 6-dehydrogenase TERM 482 1171115 - 1171131 + gr 71 -5.9 -4.2717 | GCTCGAGCAGTAATC GATTTCT GTC AGGAATC TTTTCATGGACTGGT TERM 483 1172049 - 1172024 - GR 79 -11.9 -3.10522 | ATCGTATTCAACATA CGCATGCAGGT TTCT ACCTGCATGGG CTGATAGACGCTCTT Mthe_1082 1173178 - 1172264 - | hypothetical protein Mthe_1083 1173942 - 1173184 - | hypothetical protein Mthe_1084 1175734 - 1173914 - | hypothetical protein Mthe_1085 1176250 - 1175789 - | bacitracin resistance protein BacA TERM 484 1176224 - 1176236 + g 74 -3.3 -4.83615 | CAGCAGACCGAAAGC GAGCC GGA GGATC TTTTTGTGGCGCATC Mthe_1086 1177355 - 1176255 - | hypothetical protein TERM 485 1176961 - 1176973 + g 77 -7.7 -4.37092 | GATGCAAGGCCTTTT GCGAT GGC ATCGC TTTTCTCAGAGAGAT Mthe_1087 1177623 - 1177348 - | hypothetical protein Mthe_1088 1177902 - 1178858 + | ATPase TERM 486 1179144 - 1179168 + G 71 -8.5 -3.81027 | overlap 1179163 CAACAGAAAGTTCGA GCTTGCATCGG AAA TCGCTGCAGGC TTTGCGTTCATTGCA Mthe_1089 1178860 - 1179714 + | hypothetical protein TERM 487 1179804 - 1179790 - T 81 -5.7 -5.00616 | overlap 1179792 1179793 TTCTTGCTCAAAAAA GATGC TGCTC GCATC GAGAATGCATGCGAG Mthe_1090 1180130 - 1179855 - | hypothetical protein Mthe_1091 1180769 - 1182157 + | carbohydrate kinase, YjeF related protein Mthe_1092 1182207 - 1182656 + | putative molybdenum cofactor biosynthesis protein C Mthe_1093 1183748 - 1182771 - | thiamine-monophosphate kinase Mthe_1094 1183979 - 1183767 - | hypothetical protein Mthe_1095 1184289 - 1184660 + | molydopterin dinucleotide-binding region TERM 488 1185327 - 1185313 - g 74 -10 -3.75169 | GATCATCGGAGGAAA GGCAGA TTC TCTGCC GGAGGATGTAGCGGG TERM 489 1185370 - 1185356 - g 80 -4.2 -5.00616 | GGCGTCTCCAAAAAA GAGCTC ATC GAGATC GCGGAGATGATGAAG Mthe_1096 1184663 - 1185955 + | molybdopterin oxidoreductase Mthe_1097 1185945 - 1187645 + | amidohydrolase 3 Mthe_1098 1187647 - 1188420 + | formylmethanofuran dehydrogenase TERM 490 1189496 - 1189468 - g 74 -6.7 -4.2461 | AGGCGGAGGAACAAA CATACACATGGCC GTG GGGCATCCGTATG GAAACGCGCTCTGGC purP 1188458 - 1189597 + | 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein TERM 491 1189883 - 1189863 - gf 74 -2.4 -5.03994 | CGTCACAGATAAAAA CCTGCACT TTGTG AGAGCCGG CATACTCTGGGACAG Mthe_1100 1189675 - 1190097 + | hypothetical protein Mthe_1101 1190058 - 1190507 + | hypothetical protein Mthe_1102 1190587 - 1191435 + | periplasmic solute binding protein Mthe_1103 1191435 - 1192187 + | ABC transporter related Mthe_1104 1192212 - 1193006 + | ABC-3 protein TERM 492 1193298 - 1193273 - g 72 -11.9 -2.62983 | CTCATCCCCACAGGA TTCTCCGGCTC TGAG GATCCGGAGAA GGAGATGGGGGAGGA Mthe_1105 1193063 - 1194034 + | hypothetical protein TERM 493 1194663 - 1194646 - T 72 -11.3 -2.70932 | TGTTGGTCTCAATGA TGCTGCG CAAG CGCAGCA TCCTGCTACCAGATC Mthe_1106 1196009 - 1194909 - | cytochrome c biogenesis protein, transmembrane region Mthe_1107 1197099 - 1196047 - | permease Mthe_1108 1197483 - 1197100 - | ArsR family transcriptional regulator Mthe_1109 1198386 - 1197643 - | response regulator receiver protein Mthe_1110 1199235 - 1198609 - | hypothetical protein Mthe_1111 1199596 - 1200168 + | adenine phosphoribosyltransferase Mthe_1112 1200165 - 1200482 + | hypothetical protein Mthe_1113 1201777 - 1200479 - | dihydroorotase Mthe_1114 1202339 - 1201857 - | hypothetical protein Mthe_1115 1202642 - 1202394 - | hypothetical protein Mthe_1116 1203507 - 1202620 - | hypothetical protein TERM 494 1203574 - 1203554 - R 70 -9.7 -3.11634 | opp_overlap 1203571, overlap 1203557 TCGCATACTAGTGAA CTACCCTAC TCT GGAGGGTAG GGCTTCCCACTTCAT Mthe_1117 1204741 - 1203554 - | IS605 family transposase OrfB Mthe_1118 1205934 - 1205056 - | alpha-L-glutamate ligase Mthe_1119 1206489 - 1205974 - | hypothetical protein Mthe_1120 1207296 - 1206499 - | diphthine synthase TERM 495 1207384 - 1207365 - H 71 -6.4 -4.26903 | opp_overlap 1207377 CCGAGTGCAGGAAAA CATGGGCA TTGC TTCCCATG AGTGCTGGGAATTGC Mthe_1121 1207400 - 1208260 + | ribulose-1,5-biphosphate synthetase Mthe_1122 1208261 - 1208698 + | hypothetical protein Mthe_1123 1210039 - 1209011 - | radical SAM domain-containing protein Mthe_1124 1211667 - 1210192 - | uroporphyrin-III C-methyltransferase hemC 1212469 - 1211657 - | porphobilinogen deaminase Mthe_1126 1213848 - 1212559 - | glutamate-1-semialdehyde aminotransferase Mthe_1127 1215019 - 1213841 - | hypothetical protein TERM 496 1215148 - 1215168 + H 83 -11.9 -3.57792 | GGATAGGCACTGGAA CCCAGATGC AGC GTATCTGGG TTTCACAGTCGATGG TERM 497 1215500 - 1215541 + H 79 -11.7 -3.26031 | gap 1, opp_overlap 1215514, overlap 1215499 1215496 TTTCAGCGTTAGTTC TGCTACCGAATACAGGCAGA TCT TCTGGCAGTGTTCGG-AGCA TGTCTTTGAAATGAG Mthe_1128 1215574 - 1216086 + | hypothetical protein Mthe_1129 1216616 - 1216083 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Mthe_1130 1216679 - 1217002 + | hypothetical protein Mthe_1131 1217283 - 1217804 + | hypothetical protein Mthe_1132 1218920 - 1217934 - | hypothetical protein TERM 498 1218159 - 1218186 + g 77 -4.1 -5.0538 | TCCGGTGAGCATGTA CCTTTCAGGCG AGCGCA CCCTTGGAAGG TTTTTTGGGGTGACG Mthe_1133 1219235 - 1218939 - | thioredoxin Mthe_1134 1219671 - 1219222 - | AsnC family transcriptional regulator Mthe_1135 1220641 - 1219664 - | radical SAM domain-containing protein TERM 499 1220489 - 1220515 + g 79 -7.3 -4.39002 | gap 1, opp_overlap 1220488, overlap 1220492 1220494 GCCTCCAGAGATTAT CAGCATCGCCCC CATC GGGGCGAT-CTC TTTTATCAGACCTTT TERM 500 1220492 - 1220513 + g 76 -10.1 -3.79687 | opp_overlap 1220488, overlap 1220489 1220494 TCCAGAGATTATCAG CATCGCCCC CATC GGGGCGATC TCTTTTATCAGACCT TERM 501 1220494 - 1220511 + g 85 -12.7 -3.48115 | opp_overlap 1220488, overlap 1220492 1220489 CAGAGATTATCAGCA TCGCCCC CATC GGGGCGA TCTCTTTTATCAGAC Mthe_1136 1221670 - 1220642 - | aspartate-semialdehyde dehydrogenase TERM 502 1221632 - 1221618 - G 86 -10 -4.37092 | opp_overlap 1221616, overlap 1221630 AGTCCTTCGATAAAA CGCTGT CCA ACAGCG CCTGTTGCACCCAGG TERM 503 1222009 - 1222025 + H 75 -11.5 -2.68009 | overlap 1222006 1222005 GGAGACCATTCATCA GCGGCCC ATG GGGCTGC TAACTTCTGTCTTTT Mthe_1137 1222333 - 1223832 + | hypothetical protein Mthe_1138 1223841 - 1224050 + | zinc finger protein Mthe_1139 1224054 - 1224791 + | MIP family channel protein Mthe_1140 1225600 - 1224806 - | hypothetical protein TERM 504 1225732 - 1225718 - H 80 -2.8 -5.42259 | GTATTCCTAAAAAAA CCTC TGGTTTT GAGG CAAATGTGAGACAAA TERM 505 1227048 - 1227058 + G 74 -4.6 -4.74132 | TGGGAATGGGGATGG CGCT GGT GGCG TTTTTGATCGGGTAT Mthe_1142 1226279 - 1227082 + | UbiA prenyltransferase Mthe_1143 1227935 - 1227168 - | ribosomal RNA methyltransferase RrmJ/FtsJ Mthe_1144 1229055 - 1227940 - | hypothetical protein Mthe_1145 1230104 - 1229214 - | UbiA prenyltransferase TERM 506 1230164 - 1230154 - R 76 -8.2 -4.06491 | GCAATCGCAGAGAAA GGCC CAG GGCC GACTCACATCCATGC Mthe_1146 1230907 - 1230182 - | glucose-6-phosphate isomerase TERM 507 1231201 - 1231212 + G 73 -5.8 -4.43208 | TGCCATGGGGGCAGC GGCT CATC AGCC TTTCTTTGAGGGTGT Mthe_1147 1231142 - 1231837 + | hypothetical protein moaA 1232972 - 1232076 - | molybdenum cofactor biosynthesis protein A Mthe_1149 1233507 - 1233115 - | hypothetical protein TERM 508 1233696 - 1233725 + H 74 -9.3 -3.646 | overlap 1233697 GTCTTGCTATGCACT TCTGGATGCTGAA TGAT TTCAGCAACCAGC TTGTATGTCCTTCAA TERM 509 1233697 - 1233724 + H 81 -12.8 -2.78278 | overlap 1233696 TCTTGCTATGCACTT CTGGATGCTGAA TGAT TTCAGCAACCAG CTTGTATGTCCTTCA Mthe_1150 1233909 - 1234808 + | thioredoxin-disulfide reductase TERM 510 1234826 - 1234858 + G 74 -4.2 -4.72272 | gap 2, overlap 1234830 TGATGAAGAGCGCTC GATCCCCTGTTGCAGT CTG GC-GCGGCAGG-GATC TTTTTGATGGAAGGG Mthe_1151 1234813 - 1235754 + | radical SAM domain-containing protein Mthe_1152 1235879 - 1236550 + | uridylate kinase, putative Mthe_1153 1237417 - 1236551 - | signal transduction protein TERM 511 1236875 - 1236893 + g 78 -6.6 -4.59109 | overlap 1236878 GGAGGGGCTGATCCT GACCGCGC GGC GTGCGATC TTTTTCACGGGTATC Mthe_1154 1238575 - 1237442 - | radical SAM domain-containing protein Mthe_1155 1238921 - 1238556 - | phosphoribosyl-AMP cyclohydrolase Mthe_1156 1239134 - 1239814 + | hypothetical protein Mthe_1157 1239811 - 1240455 + | integral membrane protein Mthe_1158 1240442 - 1240777 + | hypothetical protein Mthe_1159 1240914 - 1241681 + | beta-lactamase domain-containing protein Mthe_1160 1242447 - 1241782 - | chromosome segregation and condensation protein ScpA Mthe_1161 1245950 - 1242435 - | chromosome segregation protein SMC TERM 512 1242893 - 1242865 - G 90 -10.3 -4.33274 | opp_overlap 1242864 1242885 1242890 TTCACAGCAGCAAAA CAGCTCATGAAGG CAT CTTTCTTGAGCTG ATCGTATCGCTCCAG TERM 513 1243186 - 1243204 + g 89 -13.2 -3.51924 | ACCGCCGTAAGCCTT GCATCGAG ACG CTCGATGC TTCTCTCCATCCCGC TERM 514 1243395 - 1243409 + g 74 -10 -3.72576 | CGCATCATTCTTCTT GAGCTC CAG GAGCTC TTTCGTACGCGCAAG Mthe_1162 1246540 - 1246070 - | hypothetical protein Mthe_1163 1246845 - 1248218 + | glutamate synthase (NADPH), homotetrameric Mthe_1164 1250393 - 1248183 - | oligosaccharyl transferase, STT3 subunit TERM 515 1248842 - 1248864 + g 71 -8.4 -3.90744 | opp_overlap 1248834 AAAAGAACCTCGATC CTTCCAGGAC ACC GGTCTGGAAG TTGTTTGCAACCACA Mthe_1165 1251586 - 1250765 - | hypothetical protein Mthe_1166 1252418 - 1251684 - | flavoprotein Mthe_1167 1252514 - 1252894 + | hypothetical protein TERM 516 1252887 - 1252924 + T 81 -12.7 -2.78526 | gap 1, overlap 1252884 1252883 GGCTCAGATCTCTGG GCTCCTAGGGCGGTACCC GCC GGGGATCTCCCT-GGAGC TGATGTATTCTGAGA Mthe_1168 1253459 - 1252875 - | hypothetical protein TERM 517 1253287 - 1253301 + g 83 -5.7 -4.96848 | opp_overlap 1253276 AACAGCCAGAAGTCG GGCAT GCCAA ATGCC TTTTTATCTGAGACG Mthe_1169 1253791 - 1254039 + | exodeoxyribonuclease VII, small subunit Mthe_1170 1254652 - 1254200 - | HEAT repeat-containing PBS lyase Mthe_1171 1255254 - 1254667 - | indolepyruvate oxidoreductase subunit B Mthe_1172 1257035 - 1255251 - | thiamine pyrophosphate binding domain-containing protein TERM 518 1256083 - 1256098 + g 72 -2.4 -4.86731 | overlap 1256084 1256085 TCCAGCTCGCCAGCT CTGGGG ACAT CCCCGC TTTTCTTTCCGAGGA Mthe_1173 1258491 - 1257208 - | thiamine biosynthesis protein ThiC Mthe_1174 1259083 - 1258880 - | hypothetical protein TERM 519 1259488 - 1259431 - R 100 -17.2 -2.63688 | gap 2, opp_overlap 1259448 1259480 AGCCAAAGCAATCGA CTTCATCCCCCACAGCACCGGTGCGC AGATCAGG GGGCACCGGTGCTGTGGGGG-T-ACG CGTGACCTCCTCTCC Mthe_1175 1260395 - 1259592 - | hypothetical protein TERM 520 1259668 - 1259647 - G 74 -9.5 -3.65812 | opp_overlap 1259666 CTCGTCTGAATATAA CGATATCCA CCCT TGGATACCG CGATCTTGTGGTTCA Mthe_1176 1260707 - 1262566 + | threonyl-tRNA synthetase Mthe_1177 1265177 - 1262553 - | S-layer-like domain-containing protein TERM 521 1262900 - 1262910 + g 70 -6.8 -4.17048 | CGTTTATGTCGCCCA CCAG CGT CTGG TTCTTTTGACCAACG TERM 522 1264108 - 1264088 - G 75 -11.1 -3.39327 | TCTCCACAGGCACAA TCGGCCCGA ACC TCGGGACGA CACGTCTGGAGCTGC Mthe_1178 1265238 - 1266032 + | nitrogenase Mthe_1179 1266086 - 1267480 + | cobyrinic acid a,c-diamide synthase Mthe_1180 1267580 - 1268599 + | putative deoxyhypusine synthase Mthe_1181 1268953 - 1269693 + | nucleotidyl transferase Mthe_1182 1269938 - 1269699 - | putative glycosyl transferase TERM 523 1270079 - 1270067 - H 73 -4.7 -4.72486 | GAGAAAGGTGAAAAA CCCGG ATA CCGCG TGCCTATTTGAGATA Mthe_1183 1270284 - 1272185 + | hypothetical protein Mthe_1184 1272657 - 1273526 + | transposase, IS4 family protein TERM 524 1274500 - 1274484 - g 74 -6.5 -4.32857 | GCTTGCAAACACAAA GGCTGTT AAG AACGGCC AAGTCTATGTTATAA Mthe_1185 1273621 - 1274685 + | periplasmic binding protein Mthe_1186 1274785 - 1275894 + | transport system permease protein Mthe_1187 1275896 - 1276897 + | dienelactone hydrolase TERM 525 1277042 - 1277063 + T 78 -11.7 -3.07192 | opp_overlap 1277045, overlap 1277045 AAGTTAACATATGGA TAAGAGCGT GCAA ACGCTCTTA TGTATTCAGCAACTT TERM 526 1277045 - 1277060 + T 74 -9 -3.68024 | opp_overlap 1277045, overlap 1277042 TTAACATATGGATAA GAGCGT GCAA ACGCTC TTATGTATTCAGCAA Mthe_1188 1279639 - 1278035 - | transposase TERM 527 1280052 - 1280067 + H 76 -9 -3.85603 | opp_overlap 1280040 1280051, overlap 1280051 ATCGGAACTAACAGT GCCTGA GGGA TCAGGC TATTTATTTGGTGAC Mthe_1189 1280818 - 1282089 + | acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase Mthe_1190 1282139 - 1282414 + | hypothetical protein Mthe_1191 1282418 - 1282726 + | hypothetical protein Mthe_1192 1283491 - 1282931 - | hypothetical protein TERM 528 1284474 - 1284449 - R 74 -4 -4.98758 | gap 1, opp_overlap 1284450, overlap 1284450 AAAAATGGATAAAAA TTCCGCGCTCA GACTA TGAGCG-GGAT GTTCTCGACGGACTC Mthe_1194 1286436 - 1284457 - | acetate--CoA ligase Mthe_1195 1288826 - 1286814 - | acetate--CoA ligase TERM 529 1288777 - 1288787 + g 70 -3.2 -4.7254 | TCAAGAAGAACCGCA GTTG TAG CAGC TTTTTCCTCAGCCAT Mthe_1196 1291134 - 1289152 - | acetate--CoA ligase TERM 530 1292777 - 1292763 - g 70 -5.6 -4.46155 | overlap 1292765 GAGAGAGCGATAAAA GAGCTC TCA GAGCAC GACGACCCGATCGCG Mthe_1197 1291422 - 1292831 + | ATPase TERM 531 1293105 - 1293162 + F 81 -12.7 -2.69964 | opp_overlap 1293093, overlap 1293115 TAAGCCTGGAGGACC TCGCCGACAGGCTCCCGGATCATCC GGAAAAGA GGGAGATCGCGGAGCTTGTCAGCGA TGATGTAATTCCAAG Mthe_1198 1293281 - 1293739 + | formylmethanofuran dehydrogenase, subunit C (tungsten) TERM 532 1294366 - 1294386 + GF 73 -10.4 -3.12999 | TTCGCGGGAATGCGA GATCCGCG CCTCT CGCGGGTC TTGCATCTGAGCTCG Mthe_1199 1293711 - 1295198 + | hypothetical protein Mthe_1200 1295394 - 1296320 + | putative deoxyhypusine synthase Mthe_1201 1296865 - 1296425 - | putative transcriptional regulator Mthe_1202 1297610 - 1296840 - | ABC transporter related Mthe_1203 1298290 - 1297604 - | binding-protein-dependent transport systems inner membrane component Mthe_1204 1299164 - 1298283 - | ABC transporter tungsten-binding protein Mthe_1205 1299628 - 1300671 + | hypothetical protein TERM 533 1301506 - 1301533 + G 76 -5.4 -4.69053 | overlap 1301509 CAGGAGAGGGCCTTC CTGTCCTGGACG GAGG CGGCCTGGATGG TTTTGTTGCCTCATC Mthe_1206 1301280 - 1303313 + | carbohydrate-binding and sugar hydrolysis Mthe_1207 1303875 - 1303435 - | type I restriction-modification system restriction subunit TERM 534 1303583 - 1303597 + g 76 -3.4 -4.99043 | overlap 1303584 ACGAGGGCCTTGTCG TGCTCG ATG CGTGCG TTTTGTTTGTCGGAA Mthe_1208 1304204 - 1304079 - | restriction endonuclease S subunits Mthe_1210 1306159 - 1304813 - | putative transcriptional regulator Mthe_1211 1307744 - 1306176 - | N-6 DNA methylase TERM 535 1307023 - 1307034 + g 77 -7.2 -4.30576 | TGTTCGGGCGGCAGG CGGC GGTG GCCG TTTTGCTGCTCCCCG TERM 536 1307381 - 1307394 + g 83 -9.5 -4.07568 | CCAGGTCAATGACGC CCCGC AGCC GCGGG TTTTCGCGGGCCACC Mthe_1213 1308767 - 1308177 - | type I restriction-modification system specificity subunit Mthe_1214 1310148 - 1308928 - | ADP-specific phosphofructokinase Mthe_1215 1311262 - 1310156 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 537 1311134 - 1311148 + g 71 -7.8 -3.96827 | GAAGTGGAGCTTTAT GGCGGT GAG ATCGCC TTTATCGATAATTTT Mthe_1216 1313732 - 1311786 - | carbon-monoxide dehydrogenase, catalytic subunit TERM 538 1313302 - 1313316 + g 72 -2.1 -4.91109 | gap 1, overlap 1313298 1313297 ATATCGAGCATGGAG GC-GAG ACGT CTCAGC TTTTTCTGCTCAACG Mthe_1217 1314827 - 1313808 - | hypothetical protein TERM 539 1314022 - 1314035 + g 70 -6.7 -4.19624 | AAGGTGACGCCCAGC CTGAC CCAC GTCAG TTTATCTTCCGAGTC TERM 540 1314804 - 1314816 + g 70 -3.3 -4.77438 | CTCCTCACGTACATC CCATG CGG CAAGG TTTTTCATCATAGAT Mthe_1218 1315109 - 1316446 + | adenylosuccinate lyase TERM 541 1316754 - 1316808 + F 72 -10.3 -2.94633 | opp_overlap 1316758, overlap 1316753 GGATGTCGCGGGTAA TTAATCATTATTCGGAGAGGTTCCC CCAAA GTGGATGTGTCCGAATAATGATTAA GTTTCTGACATGTAT Mthe_1219 1316946 - 1317584 + | small GTP-binding protein Mthe_1220 1317589 - 1317951 + | hypothetical protein Mthe_1221 1317952 - 1318380 + | hypothetical protein Mthe_1222 1318536 - 1318384 - | hypothetical protein Mthe_1223 1318987 - 1318586 - | hypothetical protein Mthe_1224 1319124 - 1320695 + | D-3-phosphoglycerate dehydrogenase Mthe_1225 1321619 - 1322356 + | purine phosphorylase family 2 Mthe_1226 1322730 - 1323419 + | hypothetical protein TERM 542 1323463 - 1323430 - T 76 -11.1 -3.0976 | gap 1, opp_overlap 1323430 1323429 CGTAAGATTGCAACA GGCATGGACCCC-CAT CAG ATGTGAGGTCCATGCA ATAATTTTTCATTCA TERM 543 1323574 - 1323592 + T 75 -11.8 -2.73159 | overlap 1323573 GCTCGTTTCGACTTA TCTTCGAC TGC GTCGAAGA GTTTCGACAAATTCG TERM 544 1323821 - 1323833 + T 71 -4.8 -4.63932 | opp_overlap 1323806 TCTGCTCAAGCATCT CTGC CCCGA GCAG TTTTGTTCAGCGCTG Mthe_1227 1324598 - 1323849 - | ABC-2 type transporter Mthe_1228 1325528 - 1324599 - | daunorubicin resistance ABC transporter ATPase subunit TERM 545 1325685 - 1325730 + r 72 -10.3 -3.07043 | gap 1 ATTCATTCCTGTACA CCGGACTGGAGAGCG-CGAAGC CTC GCCTCGACGCGCTCCAGCTCGC TCTTCAGCTCCTCCC Mthe_1229 1325878 - 1325672 - | hypothetical protein Mthe_1230 1326202 - 1325879 - | regulatory protein, ArsR TERM 546 1327187 - 1327173 - g 88 -10 -4.45083 | CTTATATTGAGAAAA GGCTGA ACT TCAGCC TGGGATGCTATGGCT Mthe_1231 1326626 - 1327390 + | hypothetical protein Mthe_1232 1329988 - 1327526 - | DEAD/DEAH box helicase domain-containing protein TERM 547 1328539 - 1328517 - G 74 -9.8 -3.6682 | opp_overlap 1328517 1328534 1328535 TGCGATGCAGGGAAA TCCACGCCCG CTG CAAGCGCGGA TGTAGTGACGACCGC TERM 548 1329835 - 1329850 + g 74 -7.6 -4.15044 | opp_overlap 1329837 AATCGTCTGGGGGAA GATACC TCTC GGTATC TTTCTTCACCAGAAA Mthe_1233 1330785 - 1329991 - | helix-turn-helix, type 11 domain-containing protein Mthe_1234 1331340 - 1330828 - | hypothetical protein TERM 549 1331290 - 1331280 - G 70 -3.2 -4.71061 | ATTCAGAGCCAAAAA CCTG GAG CAGA GGGACCAGATCAGAT Mthe_1235 1331492 - 1332595 + | UDP-N-acetylglucosamine 2-epimerase Mthe_1236 1332621 - 1333457 + | hypothetical protein rpl40e 1333884 - 1334030 + | 50S ribosomal protein L40e TERM 550 1334408 - 1334389 - g 71 -4.2 -4.54047 | gap 1, opp_overlap 1334390 1334397, overlap 1334390 1334393 TTATCTTATAGAAAA CCAG-GCGC TCG GCGCACCGA TTGTCTCCAGATACG Mthe_1238 1334039 - 1334806 + | geranylgeranylglyceryl phosphate synthase-like protein Mthe_1239 1334799 - 1335950 + | peptidase M24 Mthe_1240 1336076 - 1337134 + | hypothetical protein Mthe_1241 1337623 - 1338867 + | glycine hydroxymethyltransferase Mthe_1242 1338879 - 1339721 + | methenyltetrahydrofolate cyclohydrolase Mthe_1243 1339718 - 1340296 + | hypothetical protein Mthe_1244 1340293 - 1340925 + | molybdopterin-guanine dinucleotide biosynthesis protein Mthe_1245 1341764 - 1342618 + | rubredoxin-type Fe(Cys)4 protein TERM 551 1342668 - 1342652 - T 75 -3.7 -5.0133 | GATGGGCGGAAAAAA GGTCT ATATCTA AGACC CGAGCTGACGTTCGT Mthe_1246 1343269 - 1342661 - | dTMP kinase TERM 552 1342703 - 1342739 + g 79 -13.8 -2.72441 | overlap 1342699 CTGGATGAATCGCTC GATCTCAGAGGCTGCA CGCTC TGCCACCTCTGAGATC TCCCTTTCTGCATTT TERM 553 1343193 - 1343175 - G 83 -9.6 -4.19735 | CTGGTGAAAACGAAA TCCGGAAA CCT CTTCCGGA GCATCCGCGCGACTG Mthe_1247 1344289 - 1343426 - | hypothetical protein TERM 554 1343703 - 1343682 - G 70 -9.5 -3.39727 | overlap 1343680 1343686 CAATGATAGATAACA TCAACAACC ACGC GGTTGCTGA ACATGTTTCCTGAAT Mthe_1248 1344821 - 1344348 - | response regulator receiver protein Mthe_1249 1346334 - 1344955 - | carbohydrate kinase, FGGY Mthe_1250 1349768 - 1346439 - | DNA polymerase II large subunit TERM 555 1348074 - 1348087 + g 74 -9.5 -3.63515 | GCATCCGATCCTGGT GGGCG CTCT CGCCC TTATTACGAGTCCAG Mthe_1251 1350172 - 1349765 - | hypothetical protein Mthe_1252 1351291 - 1350293 - | phosphoribosylaminoimidazole synthetase Mthe_1253 1352685 - 1351288 - | aspartate kinase carB 1356503 - 1353279 - | carbamoyl phosphate synthase large subunit TERM 556 1354831 - 1354854 + g 91 -6.6 -5.18726 | opp_overlap 1354806 TGGCCGATTCTTATC GGACCTGAGC CCAG GATCAGGACC TTTTTATTATCCGAG TERM 557 1355774 - 1355796 + g 73 -10.6 -3.42503 | overlap 1355776 CTATCGACTCTCCTG TGTGGATCCC CAT GGGATCCATG TTCTCCATGTTGCAG TERM 558 1355776 - 1355794 + g 87 -13.2 -3.2818 | overlap 1355774 ATCGACTCTCCTGTG TGGATCCC CAT GGGATCCA TGTTCTCCATGTTGC Mthe_1255 1357590 - 1356505 - | carbamoyl phosphate synthase small subunit TERM 559 1357069 - 1357080 + g 75 -3.6 -4.84311 | TATCACCGCCATCCT GGGG CCGT CTCC TTTTATTCTGTACGG TERM 560 1358424 - 1358414 - g 81 -2.4 -5.34555 | overlap 1358419 GTATACGATAAAAAA GGAG AGC CACC TTGACGATCTCTCAA TERM 561 1358642 - 1358628 - g 70 -5.6 -4.4195 | AGAGAGGTCATAAAA GAGGTC GAC GTCCTC TACATCACAAGAATC pyrB 1357977 - 1358891 + | aspartate carbamoyltransferase catalytic subunit Mthe_1257 1358895 - 1359359 + | aspartate carbamoyltransferase regulatory subunit Mthe_1258 1360044 - 1361300 + | phosphoglucomutase/phosphomannomutase alpha/beta/subunit Mthe_1259 1361297 - 1362208 + | glycosyl transferase family protein TERM 562 1362785 - 1362799 + G 74 -10 -3.71848 | opp_overlap 1362784 GCTGAACCATCACAT CTGACC GGT GGTCAG TTCTTGATCCACACG Mthe_1260 1362218 - 1363588 + | hypothetical protein Mthe_1261 1363945 - 1364427 + | flavodoxin/nitric oxide synthase Mthe_1262 1364597 - 1365505 + | translation initiation factor IF-2B subunit delta Mthe_1263 1365644 - 1366690 + | histidinol-phosphate aminotransferase Mthe_1264 1366966 - 1369239 + | anaerobic ribonucleoside-triphosphate reductase TERM 563 1369398 - 1369419 + F 73 -9.5 -3.33815 | gap 1, overlap 1369398 GGATGTGCAGCTTTA T-CTCGCAGC ATT GCTGCGAGCA TTGATTGCAAAAGCT TERM 564 1369398 - 1369418 + F 72 -11.1 -2.60075 | overlap 1369398 GGATGTGCAGCTTTA TCTCGCAGC ATT GCTGCGAGC ATTGATTGCAAAAGC Mthe_1265 1369511 - 1369687 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Mthe_1266 1371180 - 1369966 - | proteasome-activating nucleotidase Mthe_1267 1371786 - 1372646 + | hypothetical protein Mthe_1268 1372884 - 1373774 + | hypothetical protein Mthe_1269 1374521 - 1373898 - | TrkA domain-containing protein TERM 565 1374868 - 1374853 - R 76 -9 -3.85603 | opp_overlap 1374852 1374866, overlap 1374851 GTCACCAAATAAATA GCCTGA TCCC TCAGGC ACTGTTAGTTCCGAT Mthe_1271 1376756 - 1375383 - | sodium/hydrogen exchanger surE 1377588 - 1376791 - | stationary phase survival protein SurE TERM 566 1378528 - 1378500 - g 76 -10.3 -3.72485 | overlap 1378503 1378506 AAACATAATCGCAAA CAACAACGCCAGT TAC AATGGCGTCGTCG GGGAGGGCTGGTACG TERM 567 1378525 - 1378503 - g 74 -8.4 -3.97689 | overlap 1378500 1378506 CATAATCGCAAACAA CAACGCCAGT TAC AATGGCGTCG TCGGGGAGGGCTGGT TERM 568 1378522 - 1378506 - g 70 -6.5 -4.1023 | overlap 1378503 1378500 AATCGCAAACAACAA CGCCAGT TAC AATGGCG TCGTCGGGGAGGGCT Mthe_1273 1378027 - 1379559 + | parallel beta-helix repeat-containing protein TERM 569 1380040 - 1379988 - g 100 -16.3 -3.6501 | AACAAGGAGCTCAAA TCGGTAGATGAGATCGCAGCGCTCC TCG GGAACGCCGGGATCTCCCCCAGCGA CAGGGTGGTGCTGAC Mthe_1274 1379556 - 1381025 + | rhodanese domain-containing protein TERM 570 1381100 - 1381116 + F 71 -9.4 -3.4619 | overlap 1381099 ATATACATTTTCTCG GCAGCC CTAGC GGCTGC TCTTCTATTCTCCAT Mthe_1275 1381454 - 1382983 + | peptidase S8 and S53, subtilisin, kexin, sedolisin Mthe_1276 1384234 - 1383086 - | ATP-NAD/AcoX kinase Mthe_1277 1385564 - 1384212 - | tryptophan synthase subunit beta TERM 571 1384948 - 1385002 + g 90 -16.4 -2.77523 | overlap 1384952 1384953 TCTGATATCGCTATT CCAAGGCTGCCAGGCGTGTCCGGGAA CTG TTCCAGGATTCGCCTGCCAGCGTTCG TCCTGTTGCTCGGGC TERM 572 1384952 - 1384998 + g 100 -15.8 -3.28637 | overlap 1384948 1384953 ATATCGCTATTCCAA GGCTGCCAGGCGTGTCCGGGAA CTG TTCCAGGATTCGCCTGCCAGCG TTCGTCCTGTTGCTC TERM 573 1384953 - 1384997 + g 100 -19.3 -2.567 | overlap 1384952 1384948 TATCGCTATTCCAAG GCTGCCAGGCGTGTCCGGGAA CTG TTCCAGGATTCGCCTGCCAGC GTTCGTCCTGTTGCT Mthe_1278 1386312 - 1387733 + | Na+/solute symporter Mthe_1279 1388452 - 1387781 - | deoxyribonuclease V TERM 574 1389442 - 1389462 + G 79 -7.5 -4.41494 | overlap 1389443 GCGCTGAAGTATCAC TGAGCTCCC CGT GGGATCTCG TTTTCGTTCAAGATC TERM 575 1389758 - 1389777 + G 77 -3.5 -5.00616 | TTTTGGGAGGGCCAG GCTTCAG CATCCA CTGGGGC TTTTTTACAAAGAGG Mthe_1280 1388538 - 1390052 + | NHL repeat-containing protein Mthe_1281 1390054 - 1390938 + | radical SAM domain-containing protein TERM 576 1391712 - 1391676 - g 74 -10.1 -3.65046 | opp_overlap 1391693 GCTCGACTCCAACAA GACCATAGACTTCCCCG TCA CAAGGATGCCTGTGGTC GTTCCGCCGGCCAAT Mthe_1282 1391056 - 1391802 + | Cna B domain-containing protein TERM 577 1391808 - 1391819 + T 76 -2.2 -5.30616 | CCCGGCCTGAAGCCC GGGA GACA TCTC TTTTTCTTTGAATCA Mthe_1283 1392427 - 1392110 - | hypothetical protein Mthe_1284 1393109 - 1393675 + | hypothetical protein Mthe_1285 1394152 - 1393880 - | hypothetical protein Mthe_1286 1394512 - 1394189 - | hypothetical protein Mthe_1287 1394882 - 1394517 - | DsrE family protein Mthe_1288 1395711 - 1394923 - | Fe-S cluster domain-containing protein Mthe_1289 1396784 - 1395720 - | arsenical-resistance protein Mthe_1290 1397793 - 1396789 - | rhodanese-related sulfurtransferase-like Mthe_1291 1398163 - 1397798 - | ArsR family transcriptional regulator TERM 578 1398022 - 1397990 - G 70 -9.9 -3.39327 | CTCGCAGACGCAGAA CTCTCCATTCTGGAG GAG CTTCAGAATGGCAAG CCTGCACGGATCCGA Mthe_1292 1399359 - 1398364 - | hypothetical protein TERM 579 1399395 - 1399377 - R 85 -6 -5.02074 | overlap 1399379 GGACCCCCTAAAAAA TCTACCCC CAT GGGATAAA TATCTATCTGATAGA Mthe_1293 1400133 - 1399750 - | 30S ribosomal protein S8e Mthe_1294 1400863 - 1400267 - | hypothetical protein TERM 580 1400903 - 1400927 + r 90 -14.4 -3.02471 | opp_overlap 1400901 1400898 CAAAATTATATTATG CCCGATCAGA TCCTC TCTGATCGGG TGTATCTGCTCAGGC Mthe_1295 1401515 - 1400937 - | hypothetical protein Mthe_1296 1402390 - 1402142 - | hypothetical protein Mthe_1297 1402674 - 1403387 + | hypothetical protein TERM 581 1403925 - 1403900 - g 72 -2.5 -4.94972 | CAGGATAATCAAAAA CGATATCGACA GGTG TCTCGATGCCG ATGTCGGCATGGTCC Mthe_1298 1403673 - 1405175 + | 2-isopropylmalate synthase TERM 582 1405810 - 1405853 + G 100 -15.3 -4.55491 | opp_overlap 1405810 1405812 1405814 CTGCTCATCGAGACA GACAGCCCGTTTCTGTCCC CGAGAA GGGGCAGGAACGAGCCGTC TTTTATCCTTGACTC TERM 583 1405853 - 1405810 - g 87 -16.1 -2.91264 | gap 1, opp_overlap 1405810, overlap 1405812 1405814 CTGCTCATCGAGACA GACAGCCCGTTTCTGTCCCC GAGAA GGGG-CAGGAACGAGCCGTC TTTTATCCTTGACTC TERM 584 1405851 - 1405812 - g 81 -12.9 -3.0094 | gap 1, opp_overlap 1405810, overlap 1405810 1405814 GCTCATCGAGACAGA CAGCCCGTTTCTGTCCCC GAGAA GGGG-CAGGAACGAGCCG TCTTTTATCCTTGAC TERM 585 1405849 - 1405814 - g 76 -11.9 -3.05993 | gap 1, opp_overlap 1405810, overlap 1405812 1405810 TCATCGAGACAGACA GCCCGTTTCTGTCCCC GAGAA GGGG-CAGGAACGAGC CGTCTTTTATCCTTG Mthe_1299 1405204 - 1405959 + | TatD family hydrolase Mthe_1300 1406446 - 1406934 + | hypothetical protein Mthe_1301 1406969 - 1407586 + | rhomboid family protein TERM 586 1407661 - 1407711 + F 71 -8.5 -3.63627 | gap 2, opp_overlap 1407647 1407668, overlap 1407666 ATATCTCGTCTGAGA TATCGAATCCCGCGATCTCATGCTG CTG CAGCATGAGATCACAGGAA--GATA TTTCAGGTGTGCCCG TERM 587 1407666 - 1407708 + F 78 -12 -2.63585 | opp_overlap 1407668, overlap 1407661 TCGTCTGAGATATCG AATCCCGCGATCTCATGCTG CTG CAGCATGAGATCACAGGAAG ATATTTCAGGTGTGC TERM 588 1407706 - 1407668 - f 100 -23.4 -3.15999 | opp_overlap 1407666 1407661 GTCTGAGATATCGAA TCCCGCGATCTCATGCTG CTG CAGCATGAGATCACAGGA AGATATTTCAGGTGT Mthe_1302 1407856 - 1409664 + | translation initiation factor IF-2 Mthe_1303 1410359 - 1409898 - | hypothetical protein TERM 589 1410763 - 1410773 + G 70 -3.2 -4.72272 | overlap 1410772 GCTCCATCTGGTACC GAGC GGC GTTC TTTTTGATAAAAGAC TERM 590 1411252 - 1411264 + G 71 -10.5 -3.20858 | GGTTCTCGCAGAGGG CGCGC AGG GCGCG TTCCTGGATGTGATC Mthe_1304 1410599 - 1411864 + | adenylosuccinate synthetase Mthe_1305 1412415 - 1411852 - | orotate phosphoribosyltransferase TERM 591 1412466 - 1412445 - R 72 -10.9 -2.5934 | opp_overlap 1412462, overlap 1412444 TCTCAAAGCATGAAT CGCTCGGAA TCAC TTCCGAGCA GCGATCTCCTCTTTG Mthe_1306 1413347 - 1412454 - | branched-chain amino acid aminotransferase TERM 592 1413212 - 1413192 - G 71 -11.1 -2.90075 | overlap 1413194 CTGCGCTGAATCATA GAGGCGCCT GAC ATGCGCCTC GAGCCTGAAGACCCT TERM 593 1413306 - 1413272 - G 82 -11.5 -3.87815 | opp_overlap 1413272 1413275, overlap 1413275 1413290 1413299 1413301 CCCCATCTCCATAAA GAAGGCCGTGGTC GAAGACGGA GACCACAGCCTCC TCTCTCGGGACGAAG TERM 594 1413303 - 1413275 - G 80 -9.6 -4.07133 | opp_overlap 1413272 1413275, overlap 1413272 1413290 1413299 1413301 CATCTCCATAAAGAA GGCCGTGGTC GAAGACGGA GACCACAGCC TCCTCTCTCGGGACG TERM 595 1413388 - 1413404 + H 71 -6.5 -4.21974 | overlap 1413383 1413389 TAAATGGGTTTTGAT ACCATCG TAT CGATGGA TTTATTAAATAATGC TERM 596 1413389 - 1413403 + H 70 -10 -3.12702 | overlap 1413383 1413388 AAATGGGTTTTGATA CCATCG TAT CGATGG ATTTATTAAATAATG ribH 1413460 - 1413870 + | riboflavin synthase subunit beta TERM 597 1413922 - 1413955 + G 71 -7.4 -3.9749 | opp_overlap 1413916 1413915 CGCCACAATGAGGAT CTCCTCTGAGGCCA AGCGTC TGAACTCAGAGGGG TTTGATATTATAGAT Mthe_1308 1413872 - 1415011 + | aspartate aminotransferase Mthe_1309 1415284 - 1416480 + | exodeoxyribonuclease VII, large subunit Mthe_1310 1416482 - 1416778 + | hypothetical protein Mthe_1311 1417307 - 1416879 - | hypothetical protein Mthe_1312 1417592 - 1418398 + | fructose-bisphosphate aldolase Mthe_1313 1419374 - 1418733 - | CODH nickel-insertion accessory protein TERM 598 1421020 - 1420995 - g 77 -4.5 -4.91109 | overlap 1420997 CGTTCATCACAAAAA CAGCGCGCGAG GAGT CATGCGCCCTG GGGAGGGAGAGGGGG Mthe_1314 1419536 - 1421602 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent Mthe_1315 1423469 - 1421703 - | phosphotransferase domain-containing protein TERM 599 1423130 - 1423146 + g 78 -12.3 -3.1886 | TGGGTCCCACGCCCT GGAGCTG GAG CAGCTCC TTCATGCCCTTCGGT Mthe_1316 1424039 - 1423587 - | hypothetical protein TERM 600 1424041 - 1423991 - G 80 -4.2 -5.07486 | opp_overlap 1423993 1423995, overlap 1423992 1423994 1423995 1424002 CATTTGCAAGAAAAA TCAGTGCAA-CACCCGTCAGCA GAATCATAA TGCTGACGGGCGATTGCA-TAT TGTTCATAACCTCCT TERM 601 1424039 - 1423994 - G 73 -10.6 -3.39061 | gap 1, opp_overlap 1423993 1423995, overlap 1423992 1423991 1423995 1424002 TTGCAAGAAAAATCA GTGCAA-CACCCGTCAGCA GAATCATAA TGCTGACGGGCGATTGCAT ATTGTTCATAACCTC TERM 602 1423995 - 1424038 + g 80 -11.9 -3.44552 | gap 1, opp_overlap 1423994 1423992 1423991 1423995 1424002, overlap 1423993 TGCAAGAAAAATCAG TGCAA-CACCCGTCAGCA GAATCATAA TGCTGACGGGCGATTGCA TATTGTTCATAACCT TERM 603 1424038 - 1423995 - G 81 -14.1 -2.62714 | gap 1, opp_overlap 1423995 1423993, overlap 1423994 1423992 1423991 1424002 TGCAAGAAAAATCAG TGCAA-CACCCGTCAGCA GAATCATAA TGCTGACGGGCGATTGCA TATTGTTCATAACCT TERM 604 1424030 - 1424002 - G 76 -11.8 -3.09131 | opp_overlap 1423995 1423993, overlap 1423995 1423994 1423992 1423991 AAAATCAGTGCAACA CCCGTCAGCA GAATCATAA TGCTGACGGG CGATTGCATATTGTT Mthe_1317 1424489 - 1424070 - | hypothetical protein TERM 605 1424671 - 1424649 - H 78 -7.7 -4.33417 | CTGATGGATAATAAA TGCACTGGC CGTAT GACAGTGCA GAGTCTCCCAAAAAT Mthe_1318 1425935 - 1426738 + | hypothetical protein Mthe_1319 1426809 - 1428038 + | translation initiation factor IF-2 subunit gamma Mthe_1320 1428052 - 1428435 + | nucleotide binding protein, PINc Mthe_1321 1428435 - 1429055 + | DNA-directed RNA polymerase subunit E' Mthe_1322 1429052 - 1429237 + | DNA-directed RNA polymerase subunit E, RpoE2 Mthe_1323 1429239 - 1429775 + | hypothetical protein Mthe_1324 1429802 - 1430101 + | ribosomal protein S24e Mthe_1325 1430102 - 1430251 + | ribosomal protein S27a Mthe_1326 1431003 - 1430716 - | hypothetical protein Mthe_1329 1434622 - 1435296 + | hypothetical protein Mthe_1330 1435293 - 1435880 + | phosphatidylserine decarboxylase related protein Mthe_1331 1435877 - 1436518 + | CDP-diacylglycerol--serine O-phosphatidyltransferase Mthe_1332 1436497 - 1436823 + | hypothetical protein Mthe_1333 1437038 - 1438153 + | hypothetical protein TERM 606 1438188 - 1438170 - f 76 -11 -3.25015 | opp_overlap 1438170 GTCAAGCATTATCAA CAGCTCCC CCC AGGAGCTG TTTTATTCAGGAGAT TERM 607 1438170 - 1438188 + F 100 -10.3 -4.63486 | opp_overlap 1438170 GTCAAGCATTATCAA CAGCTCC CCCCA GGAGCTG TTTTATTCAGGAGAT Mthe_1334 1438208 - 1438816 + | hypothetical protein Mthe_1335 1440984 - 1439074 - | serine phosphatase Mthe_1337 1441871 - 1441491 - | 4Fe-4S ferredoxin, iron-sulfur binding Mthe_1338 1442311 - 1441868 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Mthe_1339 1444299 - 1442311 - | formate dehydrogenase, alpha subunit TERM 608 1444032 - 1444020 - G 71 -10.5 -3.20901 | opp_overlap 1444020 ATCCTAGGAATGCAA GGGCC TTC GGCCC TCTCTCCCGCAGAAC Mthe_1340 1444810 - 1444304 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Mthe_1341 1446684 - 1444813 - | carbon-monoxide dehydrogenase, catalytic subunit TERM 609 1445180 - 1445166 - G 80 -9.2 -4.11394 | opp_overlap 1445172, overlap 1445167 AGCCCATGTGCAAAA CCGGCG GGA CGCCGA GGGACTCGCAGACAC TERM 610 1445228 - 1445247 + g 74 -7.8 -4.07687 | opp_overlap 1445243 GCCTCCTTTGCAGCC GCAGGCCT GAGC AGACCTGC TTTTGCGCAGGCGAT TERM 611 1446935 - 1446977 + H 74 -10.7 -2.94726 | opp_overlap 1446928, overlap 1446931 1446933 TGATAGAAGTTGACA GCGTGCGCC-GCCAGCA TACTATTACGC TGCTGGCTGGCGC-CGC TCTGCTGTTCTCGCA TERM 612 1447305 - 1447293 - g 79 -7.7 -4.4195 | overlap 1447279 1447297 AGAGATTTCAGAAAA CTCAG GTG CTGAG GAGCTGGCACCCATT Mthe_1342 1447267 - 1447650 + | hypothetical protein Mthe_1343 1447655 - 1448083 + | GCN5-related N-acetyltransferase Mthe_1344 1448089 - 1448616 + | hypothetical protein Mthe_1345 1448769 - 1449461 + | beta-lactamase domain-containing protein Mthe_1346 1449561 - 1449803 + | hypothetical protein Mthe_1347 1451067 - 1449823 - | citrate transporter Mthe_1348 1451470 - 1451898 + | hypothetical protein Mthe_1349 1452531 - 1451911 - | hypothetical protein Mthe_1350 1453247 - 1452696 - | hypothetical protein Mthe_1351 1453890 - 1453348 - | glutamine amidotransferase class-I Mthe_1352 1454618 - 1453902 - | putative ATP binding protein Mthe_1353 1455173 - 1454886 - | chorismate mutase Mthe_1354 1456036 - 1455170 - | shikimate kinase Mthe_1355 1456610 - 1456086 - | hypothetical protein TERM 613 1456663 - 1456645 - R 83 -2.5 -5.60993 | gap 1, overlap 1456646 GCTTTTATAAAAAAA TTCC-CAT CAGG ATGCGGAA CTCAAGAAACCATCA Mthe_1356 1457203 - 1457018 - | hypothetical protein Mthe_1357 1457669 - 1457307 - | prefoldin, beta subunit Mthe_1358 1457893 - 1457666 - | hypothetical protein Mthe_1359 1458035 - 1457898 - | DNA-directed RNA polymerase subunit P rpl37ae 1458320 - 1458036 - | 50S ribosomal protein L37Ae Mthe_1361 1459100 - 1458327 - | exosome complex RNA-binding protein Rrp42 TERM 614 1458960 - 1458971 + g 100 -5.8 -5.94214 | opp_overlap 1458959 GAGCTTGACAAGAGC GCTG CCTT CAGC TTTTTTTATTATGTT Mthe_1362 1459834 - 1459097 - | exosome complex exonuclease Rrp41 TERM 615 1459725 - 1459737 + g 80 -9.1 -4.07568 | ATCTCCATGTAGCAT GAGCC ATC GGCTC TTTTGAGCACGCCAA Mthe_1363 1460504 - 1459839 - | exosome complex RNA-binding protein Rrp4 Mthe_1364 1461213 - 1460515 - | putative RNA-associated protein TERM 616 1461017 - 1461041 + g 74 -10.7 -3.51365 | opp_overlap 1461017 TCTGTTGTGCCGAAA GCCTTGAGGAG GTC CTCCTCAGCGC TTCTATCCCCTCTGC Mthe_1365 1461937 - 1461215 - | proteasome subunit alpha Mthe_1366 1462451 - 1461927 - | ribonuclease P-related protein Mthe_1367 1463153 - 1462452 - | RNase P subunit p30 Mthe_1368 1463581 - 1463165 - | hypothetical protein Mthe_1369 1464189 - 1463578 - | 50S ribosomal protein L15e Mthe_1370 1464941 - 1464261 - | hypothetical protein Mthe_1371 1466452 - 1464938 - | hypothetical protein Mthe_1372 1466652 - 1467548 + | radical SAM domain-containing protein Mthe_1373 1467610 - 1468035 + | hypothetical protein Mthe_1374 1468047 - 1469468 + | hypothetical protein Mthe_1375 1469506 - 1470237 + | RNA methyltransferase Mthe_1376 1474082 - 1470297 - | TPR repeat-containing protein TERM 617 1470369 - 1470382 + g 74 -2.3 -5.06414 | overlap 1470364 1470354 GCGGAGCGCCTCGAG CAGGC ACTC GACTG TTTTTATTGCGGAGA TERM 618 1474077 - 1474052 - G 86 -12.7 -3.63515 | gap 1, overlap 1474066 TGTCATCTTTAATAA CACCATC-CAGG AAA CCTGCGATGGTG CGCAAGGCTTCAGCC Mthe_1377 1474972 - 1474340 - | hypothetical protein TERM 619 1475022 - 1475001 - R 100 -9.4 -5.22258 | GAAATGAAAATAAAA GCAGGGCG GAGTCT CGCCCTAC AGGGTCTTCTTTATT Mthe_1378 1475954 - 1475019 - | tetrahydromethanopterin S-methyltransferase subunit H TERM 620 1475352 - 1475368 + g 81 -13.7 -2.99471 | overlap 1475354 TCCTGAGCCAGCTCC CAGCGGC ATC GCCGCTG TGTCTATGAGAATCC Mthe_1379 1476209 - 1475955 - | tetrahydromethanopterin S-methyltransferase subunit G mtrF 1476440 - 1476213 - | tetrahydromethanopterin S-methyltransferase subunit F Mthe_1381 1477173 - 1476442 - | tetrahydromethanopterin S-methyltransferase subunit A Mthe_1382 1477526 - 1477176 - | tetrahydromethanopterin S-methyltransferase subunit B Mthe_1383 1478366 - 1477539 - | tetrahydromethanopterin S-methyltransferase subunit C Mthe_1384 1479057 - 1478368 - | tetrahydromethanopterin S-methyltransferase subunit D Mthe_1385 1479959 - 1479054 - | tetrahydromethanopterin S-methyltransferase subunit E TERM 621 1480456 - 1480440 - R 70 -2.3 -4.9218 | overlap 1480450 CATTCACCACAAAAA CATGA CTAAATC TCATG GCAAACCATCAGATG TERM 622 1480590 - 1480565 - R 100 -12.6 -3.9749 | opp_overlap 1480567 AGTGAGAATATGAAA GATGCCGGCC TCAGGG GGCCAGCATC TTGACCATGTATGCG Mthe_1386 1481555 - 1481019 - | hypothetical protein Mthe_1387 1482378 - 1481866 - | nitroreductase TERM 623 1482841 - 1482810 - g 71 -5.7 -4.25283 | ATCCGCTCATCAAAA CCGGTCGTCGCAG TGTGCG CGGTGAGGACCGG CGCAGGAAAGAGCCA Mthe_1388 1482399 - 1483769 + | hypothetical protein Mthe_1389 1484099 - 1484818 + | XRE family transcriptional regulator TERM 624 1485598 - 1485586 - g 70 -5.5 -4.42386 | CTCGGATTTACAAAA GAGCA GAT CGCTC CAGGGCTTGTGGTGC Mthe_1390 1484830 - 1485867 + | hypothetical protein Mthe_1391 1485864 - 1487027 + | acetyl-CoA acetyltransferase Mthe_1392 1486981 - 1487439 + | hypothetical protein TERM 625 1487474 - 1487459 - f 73 -10.4 -3.17051 | overlap 1487457 GTGCGATCAGGAAGA CCCGCT CTTC AGCGGG TTCGCCAGAATCGCC Mthe_1393 1487586 - 1489472 + | DNA gyrase, B subunit Mthe_1394 1489476 - 1491866 + | DNA gyrase, A subunit TERM 626 1492613 - 1492585 - g 81 -6.7 -4.77567 | opp_overlap 1492588 1492612, overlap 1492588 ATGGCCATAACAAAA GCATGCATCGTGA CAT CCATGATGCATTC TGGTCCAGGTTCATG Mthe_1395 1492254 - 1492955 + | IS605 family transposase OrfB Mthe_1396 1492959 - 1493552 + | hypothetical protein TERM 627 1493695 - 1493663 - f 71 -10.5 -2.87931 | GCGATCCCGCAGAGA CTGTGGTCGCCCTGG CCA CCAGTGCGAGCACAT GGGGGCGGCTGGATA TERM 628 1494128 - 1494143 + G 74 -7.6 -4.08144 | CTACGAGACCGACAT CCTGTT CAAG AACAGG TTTCTCATTGATACA TERM 629 1495983 - 1495965 - g 80 -11.8 -3.34398 | opp_overlap 1495945, overlap 1495963 TGGCTCTTCGAAAGA GTTTCGAC GCA GTCGAAAC CTCTCGACGGAGTCG TERM 630 1496402 - 1496390 - g 74 -4.8 -4.68424 | CAAGGGAGGCAAAAA GACG CTCTT CGTC GACAGGGCTGAGGAT Mthe_1397 1493787 - 1496612 + | DNA polymerase Pol2 Mthe_1398 1496779 - 1497729 + | elongation factor Tu domain-containing protein Mthe_1399 1500017 - 1497864 - | alpha-glucan phosphorylases Mthe_1400 1500562 - 1501572 + | hypothetical protein Mthe_1401 1501574 - 1502785 + | hypothetical protein Mthe_1402 1502775 - 1503401 + | TfuA domain-containing protein Mthe_1403 1504636 - 1503542 - | S-adenosylmethionine synthetase TERM 631 1504960 - 1504946 - g 71 -7.8 -3.9461 | overlap 1504929 TCGGTGGAACAACAA CCAACG CGG CGCTGG TGGACGGCAATAAAG Mthe_1404 1504912 - 1506594 + | hydantoinase/oxoprolinase Mthe_1405 1506584 - 1508020 + | histone deacetylase superfamily protein Mthe_1406 1508052 - 1508579 + | hypothetical protein TERM 632 1509190 - 1509216 + G 72 -12.2 -2.66787 | opp_overlap 1509184 CGGAATGGAGGTGAG CGGGCGCGGG GTCGTGG CCCGCGCCCA TCGTATGGATCTTGA Mthe_1407 1509179 - 1510549 + | AIR synthase related protein TERM 633 1510532 - 1510549 + F 71 -4.8 -4.52589 | opp_overlap 1510532, overlap 1510548 ATCAGATCGAGGCAA TCGGGC CGAGCA GCCTGA TTTTCTGTAACGCAC Mthe_1408 1510773 - 1511225 + | hypothetical protein Mthe_1409 1511954 - 1511307 - | RNA 2'-phosphotransferase-like protein Mthe_1410 1512869 - 1512174 - | multiple antibiotic resistance (MarC)-related proteins Mthe_1411 1513083 - 1514447 + | FAD dependent oxidoreductase Mthe_1412 1514537 - 1514974 + | hypothetical protein Mthe_1413 1516941 - 1514971 - | acetate--CoA ligase TERM 634 1516911 - 1516926 + g 72 -4 -4.80882 | gap 1, overlap 1516911 1516913 TGTAGACGTTCTCCT G-AGAGG ATA CCTCTGC TTTTTCATATACCAT TERM 635 1517444 - 1517430 - R 74 -10 -3.60948 | GAACACATCTCTAAA TGGCCA GAC TGGCCA GGCGATCTTGCTGGG TERM 636 1517599 - 1517645 + r 100 -13 -4.33928 | overlap 1517601 1517604 GCACAGCAAGCCCAC GTTGATGGTGCGATCCAGGAGT TTT GCTCCTGGGTCACGCCGTTACC TTTGTCTTTACAATG TERM 637 1517601 - 1517643 + r 87 -14.2 -2.51057 | overlap 1517599 1517604 ACAGCAAGCCCACGT TGATGGTGCGATCCAGGAGT TTT GCTCCTGGGTCACGCCGTTA CCTTTGTCTTTACAA TERM 638 1517604 - 1517640 + r 91 -13.7 -3.39488 | overlap 1517601 1517599 GCAAGCCCACGTTGA TGGTGCGATCCAGGAGT TTT GCTCCTGGGTCACGCCG TTACCTTTGTCTTTA Mthe_1414 1518040 - 1517633 - | hypothetical protein Mthe_1415 1519152 - 1518871 - | hypothetical protein Mthe_1416 1520665 - 1520003 - | peroxidase Mthe_1417 1521511 - 1521203 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 639 1521743 - 1521727 - H 70 -2.1 -4.94992 | overlap 1521717 1521728 TTAAATCGATAAAAA TCGATCC ATA GGAACGT GGCCTGTGAGTCACA Mthe_1418 1521800 - 1522702 + | hypothetical protein rpl12p 1523085 - 1522768 - | 50S ribosomal protein L12P TERM 640 1523141 - 1523110 - R 76 -9.4 -3.90112 | opp_overlap 1523112, overlap 1523112 CTTTCTTTAACCAAA CAGAGAACCCAGCC CGGC GGCTGCGTCCTCTT CTTCCTTCTTCTCCT TERM 641 1523139 - 1523112 - R 86 -12 -3.54146 | opp_overlap 1523112, overlap 1523110 TTCTTTAACCAAACA GAGAACCCAGCC CGGC GGCTGCGTCCTC TTCTTCCTTCTTCTC TERM 642 1523112 - 1523139 + r 79 -9.8 -3.91564 | opp_overlap 1523112 1523110 TTCTTTAACCAAACA GAGAACCCAGCC CGGC GGCTGCGTCCTC TTCTTCCTTCTTCTC rplP0 1524066 - 1523101 - | acidic ribosomal protein P0 rpl1P 1524704 - 1524066 - | 50S ribosomal protein L1P TERM 643 1524630 - 1524672 + g 71 -4.8 -4.57837 | gap 2, opp_overlap 1524628, overlap 1524632 ATTTATTGCAAGATC GACGCTCTCCTTGAAGCCCC TGGGC GGGGCCTC--GGAGACCGCC TTTTTAACCGCCTCT Mthe_1422 1525239 - 1524760 - | ribosomal protein L11 nusG 1525707 - 1525246 - | transcription antitermination protein NusG Mthe_1424 1525956 - 1526225 + | hypothetical protein Mthe_1425 1526222 - 1527334 + | histone deacetylase superfamily protein Mthe_1426 1527350 - 1528402 + | tRNA (guanine-N(2)-)-methyltransferase Mthe_1427 1528669 - 1528998 + | hypothetical protein Mthe_1428 1529120 - 1529782 + | NADPH-dependent F420 reductase Mthe_1429 1530672 - 1529884 - | methyltransferase type 11 TERM 644 1530503 - 1530523 + g 72 -11.9 -2.74597 | overlap 1530500 CCCAGGTTCGATTCC GGAGGTGCT GAG AGCATCTCC TCATCTGTGTATCCG TERM 645 1530777 - 1530788 + G 73 -5.8 -4.52589 | overlap 1530774 1530774 ACAAATGGCGATCCT GCCT GGCA AGGC TTTTATCTCCGGCGA Mthe_1430 1530766 - 1531635 + | imidazoleglycerol phosphate synthase, cyclase subunit TERM 646 1531893 - 1531858 - T 91 -4 -5.55664 | gap 1, opp_overlap 1531859 1531860 1531862, overlap 1531860 CTACCAGCAAAAAAA CAGAGACTGCGTGGTTC ACA GAACCA-GCAAACTCCT TGTGCAAAAGCTAAA TERM 647 1531891 - 1531860 - T 80 -8.8 -4.41456 | gap 1, opp_overlap 1531859 1531860 1531862, overlap 1531858 ACCAGCAAAAAAACA GAGACTGCGTGGTTC ACA GAACCA-GCAAACTC CTTGTGCAAAAGCTA Mthe_1431 1532140 - 1531916 - | deoxyribonuclease Mthe_1432 1532674 - 1533912 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase Mthe_1433 1533890 - 1534807 + | GHMP kinase Mthe_1434 1534800 - 1535585 + | hypothetical protein Mthe_1435 1535784 - 1535975 + | hypothetical protein Mthe_1436 1536012 - 1536371 + | hypothetical protein Mthe_1437 1536368 - 1536943 + | ZPR1-related zinc finger protein Mthe_1438 1536946 - 1537833 + | LPPG:FO 2-phospho-L-lactate transferase Mthe_1440 1538864 - 1539130 + | hypothetical protein Mthe_1441 1539824 - 1541233 + | phosphoesterase domain-containing protein TERM 648 1541352 - 1541332 - T 81 -12.5 -2.9348 | overlap 1541323 CTCAAATCCTATACA GGAGGCAGG TAT CCGGCCTCC ACAGCATGGTTCTTT Mthe_1442 1541765 - 1541325 - | hypothetical protein Mthe_1443 1542346 - 1543563 + | replication factor A TERM 649 1543684 - 1543698 + G 77 -4.2 -4.98255 | TGACGCCGACAGGCG CCAGAT GCA ATCGGG TTTTTGTCGTTGGGA TERM 650 1543900 - 1543878 - g 85 -12.8 -3.53012 | overlap 1543879 GCTGTCGTCGGCAAA CCCTCAGTCT ATG AGACTGAGGA CGGGAAGAAGATCAC TERM 651 1543899 - 1543879 - g 83 -14.1 -2.71712 | overlap 1543878 CTGTCGTCGGCAAAC CCTCAGTCT ATG AGACTGAGG ACGGGAAGAAGATCA TERM 652 1544112 - 1544102 - g 87 -8.2 -4.63527 | overlap 1544104 CGAGGACTGCAAAAA GGCC ATG GGCC ACTACTCCACAAAGA Mthe_1444 1543560 - 1544558 + | nucleic acid binding, OB-fold, tRNA/helicase-type Mthe_1445 1545915 - 1544731 - | argininosuccinate synthase TERM 653 1546333 - 1546317 - H 74 -2.9 -5.03409 | overlap 1546319 GCAGAAAAAAAACAA CATGACC CAA GGTCACC CATGTGGAGGAAAAT TERM 654 1546331 - 1546319 - H 73 -7.7 -4.09984 | overlap 1546317 AGAAAAAAAACAACA TGACC CAA GGTCA CCCATGTGGAGGAAA Mthe_1446 1546442 - 1547446 + | XRE family transcriptional regulator Mthe_1447 1547494 - 1548471 + | phosphoribulokinase/uridine kinase Mthe_1448 1549025 - 1548513 - | nitroreductase TERM 655 1548885 - 1548906 + g 71 -9.5 -3.57144 | opp_overlap 1548884 1548881 1548888, overlap 1548888 GTCTCTCACAACTAC GAACTTCCA GTCC TGGAGGTTC TTTGCAGATGGAGCG Mthe_1449 1549286 - 1549044 - | putative transcriptional regulator Mthe_1450 1550456 - 1551016 + | L-fuculose phosphate aldolase TERM 656 1551080 - 1551057 - T 71 -8.9 -3.54424 | GCTCATGGGGTCAAA TCGCCAGAG AGGGAA CTCTGACGA GCCAACCAGCGGCAT Mthe_1451 1552058 - 1551324 - | TPR repeat-containing protein TERM 657 1551986 - 1551973 - G 81 -2.3 -5.40072 | TCGGTCTCAAAAAAA CTCTG GTCG CAGGG CATATCCGGCGCTGA TERM 658 1552227 - 1552209 - R 77 -10.2 -3.53091 | opp_overlap 1552211 ATGCCTCCGCTCAAA CAGGGCCG AAG CGGGCCTG TGTGGGCACGCTGAA cdc6 1553448 - 1552204 - | cell division control protein 6 TERM 659 1552829 - 1552845 + g 83 -12.3 -3.71378 | GGGAATATGATCTCG TCCTCGC CAA GCGAGGA TTTCACTCTGGGATC TERM 660 1553510 - 1553522 + r 72 -6.2 -4.44046 | TTATTTCCAGTGGAA GGGG ACCAA CCCC TTTATTTCCAGTGGA Mthe_1453 1554325 - 1553861 - | hypothetical protein TERM 661 1554205 - 1554178 - G 100 -13.4 -4.16943 | CTTTATACCGGAAAA GCGGAGCTCCAC AATC ATGGTGCTCCGC GAGCATGGTACCGCC Mthe_1454 1555089 - 1555346 + | hypothetical protein TERM 662 1556391 - 1556371 - f 82 -10.4 -3.9279 | gap 1, overlap 1556362 1556358 1556372 ATCGAAGCGCAGAAA GCCCCGCCC TTCA GGGCGGG-C GGGAACTTGCAGAAA TERM 663 1556391 - 1556372 - f 72 -10.6 -2.95192 | overlap 1556362 1556358 1556371 TCGAAGCGCAGAAAG CCCCGCCC TTCA GGGCGGGC GGGAACTTGCAGAAA TERM 664 1556553 - 1556541 - g 70 -3.3 -4.72272 | opp_overlap 1556541, overlap 1556542 TGTGTTGAGCAAAAA GCTGC TGA GCAGA GCGGCTTTGTGGACG TERM 665 1556598 - 1556585 - g 72 -2.3 -4.89852 | overlap 1556586 1556587 CCATACGTATAAAAA GCTCG ATCT CGAGT TCGAGTCCGGAATCT Mthe_1455 1556469 - 1557230 + | hypothetical protein Mthe_1456 1559003 - 1558233 - | ABC transporter related Mthe_1457 1560430 - 1559258 - | UDP-glucose/GDP-mannose dehydrogenase Mthe_1458 1561011 - 1560442 - | hexapaptide repeat-containing transferase Mthe_1459 1562008 - 1561097 - | oxidoreductase domain-containing protein Mthe_1460 1563104 - 1562013 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 666 1562723 - 1562738 + g 70 -3.2 -4.73094 | GCTGGCCGTAGAGGT GCACTC CCAG GATTGC TTTTGTGTTGCTGTT Mthe_1461 1563317 - 1564525 + | major facilitator transporter Mthe_1462 1564901 - 1566067 + | hypothetical protein TERM 667 1566780 - 1566755 - T 90 -12.7 -3.6215 | gap 1, opp_overlap 1566754 1566769 GCAACCCATCTTAAA GCAT-GGACCTC AGA GAGGTCCGATGC GTATCTCATTCTGGC Mthe_1463 1567492 - 1566764 - | hypothetical protein TERM 668 1567549 - 1567525 - H 73 -7.7 -4.08064 | opp_overlap 1567531 AAGGGGCCCCCAAAA GGGGACCCCGC CCG GCGAGTTTCCC CCACGCCCCAACCCG Mthe_1464 1567742 - 1569193 + | hypothetical protein Mthe_1465 1570067 - 1571809 + | Cl- channel, voltage-gated family protein gltX 1574008 - 1572314 - | glutamyl-tRNA synthetase Mthe_1467 1574471 - 1574064 - | NUDIX hydrolase TERM 669 1574916 - 1574879 - g 79 -12.7 -2.87931 | overlap 1574911 TCCACGCCCGAGAGA GCGGCCTCATTCGCCAT CAAG ATGGCAGACGAGGGCGC CGAGGTGATAGACGT Mthe_1468 1574756 - 1576012 + | dihydropteroate synthase Mthe_1469 1576014 - 1577180 + | cytidine deaminase TERM 670 1577983 - 1578018 + G 74 -11 -3.25823 | opp_overlap 1577990 TGGCGCTCATTGGCG GCACGAACCCTGCCGC GGCC GCGGTCGAGTTCGGGC TTGATATCGAGACAG Mthe_1470 1577289 - 1578104 + | hypothetical protein Mthe_1471 1580994 - 1578478 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC Mthe_1472 1581956 - 1581000 - | integral membrane protein TerC Mthe_1473 1582315 - 1583094 + | hypothetical protein TERM 671 1583427 - 1583417 - g 74 -8.2 -3.9461 | CGCCTGGAACAACAA GGGC ATG GCCC TGGGATCGATGAGAA TERM 672 1583533 - 1583521 - g 86 -7.7 -4.77165 | CGTGGTACAACAAAA GCCAT GCC ATGGC AGCTCTCGGCAGAGC Mthe_1474 1583127 - 1583615 + | TPR repeat-containing protein Mthe_1475 1584928 - 1583939 - | methyltransferase TERM 673 1584770 - 1584796 + g 76 -11.7 -3.14795 | overlap 1584768 TCCGCACTCTTCACA TCTCTCCAGAT CTCCT GTCTGGAGAGA TCTTCGTGGGGATTT TERM 674 1588130 - 1588153 + H 100 -13.9 -4.45485 | ATATAGCCTTCATGC TGCCGGAGC ACTAGA GCTCCGGCA TTTTCTCCCTCTGGT TERM 675 1588155 - 1588181 + H 75 -8 -4.14739 | overlap 1588156 CTAGAGCTCCGGCAT TTTCTCCCTCTG GTG CAGGCGGAGAAG TTTTGCCGTGAGTCC TERM 676 1588829 - 1588853 + G 75 -4.1 -4.84017 | overlap 1588830 AGCAGTGCCCAGATG CCCTCCTCCTT TTC AGGGTGGGGGA TTTTTATGAGACCTT Mthe_1477 1588765 - 1591338 + | DNA mismatch repair protein MutS Mthe_1478 1591316 - 1592989 + | DNA mismatch repair protein MutL TERM 677 1593573 - 1593542 - g 93 -11 -4.4009 | gap 1 CCGTATCTGAGAAAA CAGATCG-AGATGGT CAG ACCATCAGCGATCTG CCTGCTCGGGAACGT Mthe_1479 1593215 - 1593769 + | phage SPO1 DNA polymerase-related protein TERM 678 1593855 - 1593827 - T 72 -10.4 -2.93975 | gap 1, overlap 1593826 1593824 ACTCTGTAAAAATAG CTGAGTCCAGATC CTCA GACCTGG-CTCAG ACCGATATATATCCT Mthe_1480 1594750 - 1593926 - | phosphate binding protein Mthe_1481 1595377 - 1594931 - | hypothetical protein Mthe_1482 1596641 - 1598281 + | hypothetical protein Mthe_1483 1598291 - 1599418 + | metallophosphoesterase TERM 679 1600332 - 1600310 - g 70 -5.5 -4.42721 | overlap 1600311 GAATGAGATAAGAAA GCACCTCCA TGACC TGGAGGCGG CTCGGAGAGATTACG TERM 680 1601482 - 1601466 - g 74 -2.2 -5.03405 | overlap 1601467 AATACCAGAGAAAAA GCATCC GCGCT GGATGA GAGAATATTCGAGCA Mthe_1484 1599405 - 1602590 + | SMC domain-containing protein Mthe_1486 1602925 - 1603206 + | hypothetical protein Mthe_1487 1603526 - 1603221 - | hypothetical protein Mthe_1488 1604198 - 1604791 + | hypothetical protein Mthe_1489 1604878 - 1607046 + | phosphoesterase domain-containing protein TERM 681 1607130 - 1607117 - T 79 -2.3 -5.40474 | overlap 1607128 AGCCCTGGAAAAAAA GGCTG AGAT CATCC TGGCGTCAGGATGTG Mthe_1490 1608258 - 1607125 - | radical SAM domain-containing protein Mthe_1491 1608503 - 1609060 + | hypothetical protein Mthe_1492 1610481 - 1609210 - | hypothetical protein Mthe_1493 1610820 - 1613105 + | PAS/PAC sensor signal transduction histidine kinase Mthe_1494 1613126 - 1613482 + | hypothetical protein TERM 682 1614478 - 1614494 + T 73 -5.1 -4.5954 | GCCGGTGACGACTCT GTTATCC CCG GGGTAGC TTTTCTGTCATCTAA TERM 683 1617299 - 1617257 - T 74 -9.9 -3.53343 | opp_overlap 1617291 AACCCCCCTTGCAAA GCCCGGATTCGAATGTATC AAGAG GATACACCCTCATCCGGAC CCTACTCGGGTGGTT TERM 684 1618191 - 1618218 + T 72 -10.6 -3.02043 | gap 1, overlap 1618207 TTACCACTCGAGCCG CCGGTGTTA-CCG CGG CGGCTGGCACCGG TCTTGCCCGGCCCTT pheT 1620588 - 1618969 - | phenylalanyl-tRNA synthetase subunit beta TERM 685 1620432 - 1620395 - G 70 -5.4 -4.38712 | CTTATTCCCAGAAAA CCCTGCAGCGCCCTGG CCACGC CCTCAGCGCTGTAGAG ATCCGGCCTGTCGGG pheS 1622071 - 1620590 - | phenylalanyl-tRNA synthetase subunit alpha Mthe_1497 1622973 - 1622275 - | creatininase Mthe_1498 1625645 - 1622970 - | oligosaccharyl transferase, STT3 subunit TERM 686 1625588 - 1625607 + g 78 -2.1 -5.22289 | gap 1, overlap 1625586 ACCAGTATCTTTCGG GCAG-GCG CTTTC TGCTCTGC TTTTTATCTTTGCTA Mthe_1499 1626493 - 1625933 - | undecaprenyl diphosphate synthase Mthe_1500 1626672 - 1627847 + | hypothetical protein Mthe_1501 1627844 - 1628653 + | shikimate 5-dehydrogenase Mthe_1502 1628784 - 1629650 + | prephenate dehydrogenase Mthe_1503 1629712 - 1631661 + | glycoside hydrolase 15-related Mthe_1504 1631847 - 1632494 + | adenylate kinases TERM 687 1632623 - 1632635 + T 74 -9.1 -3.65353 | opp_overlap 1632623 1632620 CCGGCCTGAAGACCA GAGCG CCC CGCTC TTTCCCATCATTTCA Mthe_1505 1632882 - 1632643 - | FeoA family protein Mthe_1506 1633928 - 1633110 - | imidazole glycerol phosphate synthase subunit HisF Mthe_1507 1634521 - 1633922 - | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit TERM 688 1635728 - 1635742 + G 70 -7.1 -4.12532 | opp_overlap 1635728 GCCGATGATGAACGA GTGGG GGATA CCCAC TTTCTATCTGGAGGC Mthe_1508 1634682 - 1636280 + | ferredoxin-dependent glutamate synthase TERM 689 1636270 - 1636290 + F 100 -6.1 -6.50278 | overlap 1636271 AGATACTCGACTGGA TGGGAGAGT GAG GTTCTCCCG TTTTTTTTTTGCTTT TERM 690 1636271 - 1636289 + F 76 -7.4 -4.44676 | overlap 1636270 GATACTCGACTGGAT GGGAGAGT GAG GTTCTCCC GTTTTTTTTTTGCTT Mthe_1509 1636468 - 1637400 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Mthe_1510 1639061 - 1637544 - | periplasmic copper-binding Mthe_1511 1640364 - 1639009 - | phosphoribosylaminoimidazolecarboxamide formyltransferase TERM 691 1639527 - 1639561 + gH 90 -15 -2.62184 | opp_overlap 1639515 GTATCCTGCGGTTCG GCTTGTTGCGCGTGAG GAG CTCAAGCGCATCAGGC TCGTATCCGGGAGCG Mthe_1512 1640534 - 1640902 + | hypothetical protein Mthe_1513 1640907 - 1641350 + | TOPRIM domain-containing protein Mthe_1514 1641676 - 1642176 + | hypothetical protein Mthe_1515 1642346 - 1642828 + | putative small multi-drug export Mthe_1516 1643785 - 1642994 - | methyltransferase type 11 TERM 692 1644936 - 1644947 + G 71 -5.8 -4.32034 | overlap 1644928 CCATCCTGCTTCTGG CAGC AGGC GCTG TTTTCATGATAATAG Mthe_1517 1644275 - 1646098 + | integral membrane sensor signal transduction histidine kinase Mthe_1518 1646318 - 1646154 - | hypothetical protein TERM 693 1646948 - 1646963 + H 76 -9 -3.85603 | opp_overlap 1646936 1646947, overlap 1646947 ATCGGAACTAACAGT GCCTGA GGGA TCAGGC TATTTATTTGGTGAC Mthe_1519 1647419 - 1647787 + | hypothetical protein Mthe_1520 1647792 - 1648235 + | TOPRIM domain-containing protein Mthe_1521 1648561 - 1649061 + | hypothetical protein Mthe_1522 1649231 - 1649713 + | putative small multi-drug export Mthe_1523 1650670 - 1649879 - | methyltransferase type 11 TERM 694 1651821 - 1651832 + G 71 -5.8 -4.32034 | overlap 1651813 CCATCCTGCTTCTGG CAGC AGGC GCTG TTTTCATGATAATAG Mthe_1524 1651160 - 1652983 + | integral membrane sensor signal transduction histidine kinase Mthe_1525 1653203 - 1653039 - | hypothetical protein TERM 695 1653833 - 1653848 + H 76 -9 -3.85603 | opp_overlap 1653821 1653832, overlap 1653832 ATCGGAACTAACAGT GCCTGA GGGA TCAGGC TATTTATTTGGTGAC Mthe_1526 1654304 - 1654672 + | hypothetical protein Mthe_1527 1654677 - 1655120 + | TOPRIM domain-containing protein Mthe_1528 1655446 - 1655946 + | hypothetical protein Mthe_1529 1656116 - 1656598 + | putative small multi-drug export Mthe_1530 1657555 - 1656764 - | methyltransferase type 11 TERM 696 1658706 - 1658717 + G 71 -5.8 -4.32034 | overlap 1658698 CCATCCTGCTTCTGG CAGC AGGC GCTG TTTTCATGATAATAG Mthe_1531 1658045 - 1659868 + | integral membrane sensor signal transduction histidine kinase Mthe_1532 1660088 - 1659924 - | hypothetical protein aksA 1660269 - 1661450 + | trans-homoaconitate synthase TERM 697 1661763 - 1661750 - g 71 -9.5 -3.57144 | opp_overlap 1661749 1661748 TGGCTGAGCTTCAAA CCCGG ATAG CCGGG GGATTTTTCGGCAAG Mthe_1534 1661695 - 1663620 + | hypothetical protein Mthe_1535 1663988 - 1664590 + | hypothetical protein Mthe_1536 1666854 - 1664923 - | arginine decarboxylase TERM 698 1664955 - 1664976 + g 71 -7.3 -3.99592 | CGATCATAACCCTGT GAGCTGC GCTGTTCA GCAGCTC TTTATCCTCATCGGT Mthe_1537 1667269 - 1668174 + | hypothetical protein Mthe_1538 1669960 - 1668164 - | radical SAM domain-containing protein TERM 699 1669741 - 1669730 - G 75 -5.8 -4.59773 | overlap 1669732 TGTTACTCCGAAAAA GAGC CGAG GCTC GCCGAGGCGCTTGAA Mthe_1539 1670502 - 1671527 + | anthranilate phosphoribosyltransferase Mthe_1540 1671559 - 1672185 + | phosphoribosylanthranilate isomerase TERM 700 1672477 - 1672464 - g 81 -6.7 -4.68384 | AGCCACGGAATAAAA GGAAG GCTG CTTCC GGAGTTCGATATGTT Mthe_1541 1672182 - 1673618 + | anthranilate synthase component I TERM 701 1674904 - 1674890 - g 85 -7 -4.93365 | CTCGATAATGAAAAA CCCCGC GCT GCTGGG AGAGATAACTGGGGT Mthe_1543 1674192 - 1674938 + | indole-3-glycerol-phosphate synthase Mthe_1544 1675129 - 1676205 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Mthe_1545 1676434 - 1677129 + | hypothetical protein Mthe_1546 1677587 - 1677165 - | hypothetical protein TERM 702 1677796 - 1677820 + G 77 -7.8 -4.33417 | GGTCATGGTGGACAC CTCGGAGGGC GGGGA GCCATTCGAG TTTGTTCTGGGTGAG Mthe_1547 1677719 - 1678147 + | peptidylprolyl isomerase, FKBP-type Mthe_1548 1678184 - 1680298 + | oligosaccharyl transferase, STT3 subunit Mthe_1549 1681525 - 1680362 - | glycosyl transferase, group 1 Mthe_1550 1682647 - 1681781 - | sulfate adenylyltransferase Mthe_1551 1683954 - 1682731 - | glycosyl transferase, group 1 TERM 703 1683643 - 1683632 - G 73 -5.8 -4.41956 | overlap 1683622 ACACACAGATCAAAA GGAC CTGA GTCC CTCACACGGGCTGCA Mthe_1552 1685738 - 1683954 - | glycogen synthase Mthe_1553 1686493 - 1685747 - | putative circadian clock protein, KaiC TERM 704 1689262 - 1689278 + H 70 -2.2 -4.88736 | TACGTTGGGGGATCA TCGGAT CTGAA AACCGA TTTTTATGAGTCGTG Mthe_1555 1690256 - 1691245 + | hypothetical protein Mthe_1556 1691251 - 1692012 + | hypothetical protein TERM 705 1693632 - 1693660 + G 86 -10.3 -4.1552 | opp_overlap 1693657 ATCTCCTAAGGCGAG GTGATGTGGAGTT CCT GACACCACATCGC TTTGTTGCGAAACTC Mthe_1557 1692023 - 1694113 + | DEAD/DEAH box helicase domain-containing protein Mthe_1558 1694100 - 1694672 + | CRISPR-associated Cas4 family protein TERM 706 1694894 - 1694875 - g 76 -10 -3.83026 | opp_overlap 1694874, overlap 1694876 CGTCGCCAGAGCAAA CGAGCACG GAAT CGTGCTCA ACTATTTCACACAGA TERM 707 1694893 - 1694876 - g 71 -11.3 -2.89602 | opp_overlap 1694874, overlap 1694875 GTCGCCAGAGCAAAC GAGCACG GAAT CGTGCTC AACTATTTCACACAG Mthe_1559 1694669 - 1695661 + | CRISPR-associated Cas1 family protein Mthe_1560 1695658 - 1695924 + | CRISPR-associated Cas2 family protein TERM 708 1700095 - 1700119 + T 100 -15.9 -3.00022 | opp_overlap 1700093 1700092 TAGGGATTGAAACCC TGACGCATACT GGT AGTATGCGTCA TCTCTATACAGTCGC Mthe_1561 1701111 - 1700482 - | CRISPR-associated DNA-binding protein Mthe_1562 1701139 - 1702116 + | CRISPR-associated Cas5e family protein TERM 709 1702287 - 1702262 - f 78 -11.1 -3.28712 | overlap 1702263 TGCGCCTTTTTAGAA TGCCCTGGCCT TGAG AGACCAGGGCC TAAATAAGGTGGTGG TERM 710 1702286 - 1702263 - f 89 -14.6 -2.57132 | overlap 1702262 GCGCCTTTTTAGAAT GCCCTGGCCT TGAG AGACCAGGGC CTAAATAAGGTGGTG Mthe_1563 1702307 - 1702666 + | hypothetical protein Mthe_1564 1703998 - 1702859 - | signal recognition particle-docking protein FtsY Mthe_1565 1704449 - 1703988 - | prefoldin subunit alpha rplX 1704630 - 1704439 - | 50S ribosomal protein LX Mthe_1567 1705301 - 1704636 - | translation initiation factor IF-6 Mthe_1568 1705554 - 1705291 - | ribosomal protein L31e rpl39e 1705710 - 1705561 - | 50S ribosomal protein L39e Mthe_1570 1706306 - 1705707 - | ATP-binding protein Mthe_1571 1706647 - 1706309 - | hypothetical protein Mthe_1572 1707100 - 1706651 - | 30S ribosomal protein S19e Mthe_1573 1708211 - 1707366 - | CoB--CoM heterodisulfide reductase Mthe_1574 1708728 - 1708204 - | putative heterodisulfide reductase, C subunit Mthe_1575 1710017 - 1708728 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 711 1709577 - 1709602 + g 73 -5.3 -4.63218 | overlap 1709578 1709580 TCCCTCAATGCCCTC TCTGAGAGGCC CGAA GTCCTCTCTGG TTTTGTTAAACACAA Mthe_1576 1712395 - 1710020 - | methyl-viologen-reducing hydrogenase, delta subunit TERM 712 1710730 - 1710703 - G 72 -11.2 -3.03124 | TTTCACCTTTGAAGA GCAGCTGCATCG CCTT CGATGCTGCAGC GCTCCCCTGGGCAAT TERM 713 1711477 - 1711514 + g 86 -10.5 -4.17698 | gap 1, overlap 1711478 TCACAGCGTCCGCAG GGCATGCCTCGGC-GCAG AGA CCGCAGCCGATGCATGCG TTTGTGTCTATGCAT TERM 714 1711478 - 1711513 + g 91 -14 -3.09896 | gap 1, overlap 1711477 CACAGCGTCCGCAGG GCATGCCTCGGC-GCAG AGA CCGCAGCCGATGCATGC GTTTGTGTCTATGCA Mthe_1577 1712969 - 1712469 - | hypothetical protein Mthe_1578 1713366 - 1713115 - | RNAse P, Rpr2/Rpp21 subunit Mthe_1579 1713465 - 1713716 + | hypothetical protein Mthe_1580 1714290 - 1713757 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Mthe_1581 1714338 - 1715054 + | RNA-binding S4 domain-containing protein Mthe_1582 1716087 - 1715221 - | Ion transport 2 domain-containing protein TERM 715 1715593 - 1715578 - G 72 -2.6 -4.83269 | AGAGGATATGAAAAA TATCGT CATT ACAATA AAAACAAGTCTTGCG Mthe_1583 1716821 - 1716111 - | hypothetical protein TERM 716 1716492 - 1716475 - G 75 -7 -4.41348 | overlap 1716478 1716479 TGGTGGGGAAAGAAA GGAGCT GGCGGA AGCTCC ACCACGAGCCATGAG Mthe_1584 1717043 - 1717705 + | NADPH-dependent FMN reductase Mthe_1585 1717736 - 1718299 + | imidazoleglycerol-phosphate dehydratase Mthe_1586 1719367 - 1718399 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase Mthe_1587 1720710 - 1719364 - | threonine synthase Mthe_1588 1721456 - 1721986 + | phosphodiesterase TERM 717 1722078 - 1722102 + G 70 -7.1 -4.09685 | AAAACGCATACGTCT CTCCAGGGC CTCCCCT GACCTGGAG TTTTCGGAGATGGCG Mthe_1589 1722046 - 1722468 + | methylated-DNA--protein-cysteine methyltransferase Mthe_1590 1722866 - 1722705 - | transposase Mthe_1591 1724210 - 1723077 - | periplasmic binding protein Mthe_1593 1726042 - 1724924 - | periplasmic binding protein Mthe_1595 1727224 - 1726355 - | transposase, IS4 family protein Mthe_1596 1728269 - 1727250 - | periplasmic binding protein Mthe_1597 1729499 - 1728270 - | periplasmic binding protein TERM 718 1729310 - 1729338 + g 84 -3.2 -5.28983 | gap 1 TGGAATCCACCTTGC CATCGTAATTGGC ATCG GCAAATT-CGGTG TTTTTCTCTTTTCCG TERM 719 1729679 - 1729669 - R 77 -6.8 -4.55625 | opp_overlap 1729669 ATCAAGATCATAAAA GCAG TCG CTGC TCTGATATCCGCCAT cobN 1733609 - 1729809 - | cobaltochelatase Mthe_1599 1733761 - 1734453 + | hypothetical protein Mthe_1600 1734928 - 1736532 + | transposase Mthe_1601 1737863 - 1737075 - | phosphoribosylaminoimidazole carboxylase related protein TERM 720 1738015 - 1738031 + r 76 -7.2 -4.3467 | opp_overlap 1738015 1738013 TCAAAATAAAATAGA GGCCGG AAAGA TCGGCC TTTTCATCTCACAGT Mthe_1602 1746005 - 1738035 - | Cna B domain-containing protein TERM 721 1746083 - 1746032 - H 72 -11.1 -2.56095 | opp_overlap 1746044, overlap 1746028 TGGACATCCAATCGA TCACTCTCC-TGCCCGCTTAGAGGT TTAC ACCTC-AAGCAAGCATGGAGACCGA CCAGCTTAAGTAGCT cdc6 1747337 - 1748458 + | cell division control protein 6 Mthe_1605 1749381 - 1748539 - | hypothetical protein Mthe_1606 1750079 - 1749381 - | threonyl/alanyl tRNA synthetase, SAD TERM 722 1750472 - 1750511 + r 95 -12 -4.14472 | overlap 1750473 1750475 ATCCTGTCATGCTCA CGTGGCAGAGGCTGCAGC CTCG GCAGCAGCCTTGGCCGCC TTTTCAGCCTCTTCA TERM 723 1750473 - 1750510 + r 100 -15.5 -3.08201 | overlap 1750472 1750475 TCCTGTCATGCTCAC GTGGCAGAGGCTGCAGC CTCG GCAGCAGCCTTGGCCGC CTTTTCAGCCTCTTC Mthe_1607 1751167 - 1750469 - | V-type ATP synthase subunit D Mthe_1608 1752563 - 1751172 - | V-type ATP synthase subunit B Mthe_1609 1754305 - 1752575 - | V-type ATP synthase subunit A Mthe_1610 1754595 - 1754296 - | V-type ATP synthase subunit F TERM 724 1754519 - 1754529 + g 74 -6.8 -4.258 | overlap 1754508 TCCTCTTCCGAGGTG GCCT CGT AGGC TTTCTTGATCCCTGC Mthe_1611 1755644 - 1754595 - | V-type ATP synthase subunit C Mthe_1612 1756198 - 1755650 - | V-type ATP synthase subunit E Mthe_1613 1756485 - 1756228 - | H+-transporting two-sector ATPase, C subunit Mthe_1614 1758565 - 1756541 - | V-type ATPase, 116 kDa subunit Mthe_1615 1758884 - 1758558 - | H(+)-transporting ATP synthase, subunit H TERM 725 1758780 - 1758794 + g 77 -4.2 -4.94972 | overlap 1758781 CGCTGCTTCAGTAGT GGCATC GGC GATGCG TTTTTCCTTCTCCTG Mthe_1616 1760179 - 1759007 - | ribulose-bisphosphate carboxylase Mthe_1617 1761663 - 1760365 - | hypothetical protein rps13p 1762060 - 1762539 + | 30S ribosomal protein S13P rps4p 1762555 - 1763106 + | 30S ribosomal protein S4 rps11p 1763103 - 1763492 + | 30S ribosomal protein S11P Mthe_1621 1763506 - 1764300 + | RNA polymerase, insert TERM 726 1764280 - 1764309 + F 73 -7.8 -4.05747 | opp_overlap 1764281, overlap 1764281 CTGGCGCTCCAGGAT ACGCTCGCCTCA ATCTCC TGAGGCGAGAGG TTTATATCCAATGTG TERM 727 1764308 - 1764281 - f 80 -12 -2.78384 | opp_overlap 1764280 1764281 TGGCGCTCCAGGATA CGCTCGCCTCAA TCTC CTGAGGCGAGAG GTTTATATCCAATGT TERM 728 1764281 - 1764308 + F 74 -11.3 -3.02966 | opp_overlap 1764281, overlap 1764280 TGGCGCTCCAGGATA CGCTCGCCTCA ATCTCC TGAGGCGAGAG GTTTATATCCAATGT Mthe_1622 1764768 - 1765532 + | TPR repeat-containing protein Mthe_1623 1765619 - 1766197 + | sulfopyruvate decarboxylase TERM 729 1766320 - 1766337 + G 70 -3.4 -4.71426 | gap 1 TCGTCTGCAACCTGG GCTACCC CAGCA GGG-AGC TTTTCTTCATCAGAG Mthe_1624 1766244 - 1766807 + | thiamine pyrophosphate binding domain-containing protein Mthe_1625 1768026 - 1766770 - | hypothetical protein Mthe_1626 1770951 - 1768252 - | periplasmic copper-binding Mthe_1627 1772364 - 1771621 - | hypothetical protein TERM 730 1772596 - 1772553 - H 75 -11.8 -2.52896 | opp_overlap 1772560 1772561, overlap 1772560 1772569 TCACTTTTGAATTTA CAGCGAACTCGATACACTGC CAGA GCAGGCTATCGAATTCGTTG CGAGACTATTTGAGC Mthe_1628 1772666 - 1772920 + | hypothetical protein Mthe_1629 1773653 - 1772883 - | bacitracin resistance protein BacA TERM 731 1774602 - 1774624 + G 88 -13.4 -3.42663 | opp_overlap 1774592, overlap 1774600 CAACAGCTCCTGATC GCCACTGCGG TGG CAGCAGTGGC TCTTTACCTCATACT Mthe_1630 1773915 - 1775417 + | hypothetical protein Mthe_1631 1775716 - 1776153 + | heat shock protein Hsp20 Mthe_1632 1777511 - 1776303 - | GTP cyclohydrolase II Mthe_1633 1777698 - 1778216 + | XRE family transcriptional regulator Mthe_1634 1778221 - 1779231 + | flap endonuclease-1 Mthe_1635 1779231 - 1780235 + | diphthamide biosynthesis protein Mthe_1636 1781412 - 1780258 - | L-tyrosine decarboxylase Mthe_1637 1783673 - 1781409 - | phosphoenolpyruvate synthase Mthe_1638 1783783 - 1784466 + | lysine exporter protein LysE/YggA Mthe_1639 1784463 - 1785044 + | hypothetical protein TERM 732 1785114 - 1785091 - g 70 -5.2 -4.47611 | GATGACAAAAAAAGA GGAGAGAGAT GCGA AGCTCCCCCC AAAATCGAACTTCAG Mthe_1640 1785077 - 1786513 + | prolyl-tRNA synthetase Mthe_1641 1786620 - 1787519 + | hypothetical protein Mthe_1642 1787689 - 1787516 - | preprotein translocase subunit SecG TERM 733 1787781 - 1787771 - R 71 -4 -4.67353 | GGAGGGATCCAAAAA TATG CAC CATA CATCTCTCGATTATC TERM 734 1788138 - 1788096 - R 81 -9.9 -4.10925 | gap 1, opp_overlap 1788088 1788103 1788106 ACACAGGCCTCAAAA TGAGG-TATCTGCTGTCCTG ATAA CAGGACAGCTGCTCTCCTCA ATCAAGTATCCTGTG TERM 735 1788106 - 1788127 + r 90 -14.5 -2.66964 | opp_overlap 1788096, overlap 1788103 CAAAATGAGGTATCT GCTGTCCTG ATAA CAGGACAGC TGCTCTCCTCAATCA Mthe_1643 1789026 - 1788136 - | tetrahydromethanopterin formyltransferase Mthe_1644 1789631 - 1789032 - | IMP cyclohydrolase Mthe_1645 1790515 - 1789613 - | thiamine pyrophosphate binding domain-containing protein Mthe_1646 1791752 - 1790526 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Mthe_1647 1792006 - 1791749 - | pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit Mthe_1648 1792542 - 1792003 - | pyruvate ferredoxin oxidoreductase subunit gamma Mthe_1649 1793158 - 1792673 - | hypothetical protein TERM 736 1793041 - 1793069 + g 74 -8.1 -4.04206 | overlap 1793017 CGCTGACGACCATCT GGGTGATGTCCAC CAT GTCAGCATCACCC TTTGTGTCGAACTCG Mthe_1650 1793700 - 1793197 - | transcription factor TFIIE, alpha subunit Mthe_1651 1794234 - 1795619 + | FAD linked oxidase domain-containing protein Mthe_1652 1795629 - 1796696 + | hypothetical protein Mthe_1653 1796938 - 1797639 + | hypothetical protein Mthe_1654 1798701 - 1797793 - | tetrahydromethanopterin S-methyltransferase subunit H TERM 737 1798817 - 1798843 + H 79 -2.3 -5.40072 | gap 1 GGCTGACATCGATAT CGC-TAGGTTGG GACA TTGACCTATGCG TTTTTTTGACAACCC Mthe_1656 1799720 - 1799989 + | DNA-binding protein Alba Mthe_1657 1799979 - 1800644 + | phosphoribosylglycinamide formyltransferase Mthe_1658 1800710 - 1801204 + | histidine triad (HIT) protein Mthe_1659 1801922 - 1801434 - | hypothetical protein Mthe_1660 1802005 - 1803435 + | 7-cyano-7-deazaguanine tRNA-ribosyltransferase Mthe_1661 1803422 - 1805122 + | PUA domain-containing protein Mthe_1662 1805826 - 1805245 - | hypothetical protein Mthe_1663 1805856 - 1807043 + | metal dependent phosphohydrolase Mthe_1664 1807588 - 1807343 - | hypothetical protein Mthe_1665 1808299 - 1807757 - | formylmethanofuran dehydrogenase, subunit E region Mthe_1666 1809665 - 1808598 - | hypothetical protein Mthe_1667 1810304 - 1809780 - | tRNA 2'-O-methylase TERM 738 1810755 - 1810744 - H 74 -3 -5.16472 | AAAAACTGGAAAAAA CTAT TTTT ATAG ACATTTCTCAGTGTA TERM 739 1811296 - 1811317 + H 100 -13.1 -4.17958 | AGGAAAGCGACCTCG TGCTGCAGT ATGC ACTGCAGCA TTTATTCCGAATGTT Mthe_1668 1811605 - 1812054 + | hypothetical protein Mthe_1669 1813310 - 1812267 - | ABC-2 type transporter TERM 740 1812858 - 1812825 - G 76 -8.8 -3.97139 | GAATGTGAAGAAGAA CACCACCAGGCCGA GTATGG CCGGCCCGATCGTG TCAGTCATCTCCATA Mthe_1670 1814167 - 1813307 - | ABC transporter related Mthe_1671 1815318 - 1814197 - | hypothetical protein TERM 741 1814255 - 1814232 - G 86 -9.6 -4.30576 | TTCTGATGATGAAAA TGATCGATGC AATG GCAGCGATCA GAAGCGCACCAGCCC TERM 742 1814763 - 1814791 + g 80 -5.3 -4.84359 | TGCAGTTGATCAGCG CATACATCCTG TACATCC CTGGATGTGTG TTTTTGTAAACCTCA Mthe_1672 1817581 - 1815362 - | helicase c2 TERM 743 1815987 - 1816012 + g 72 -11.9 -2.61383 | overlap 1815986 AGGGCGCTTATGTAG CCGGATATCAG GTTC CTGTTATCCGG GTTCTCCCTCGCGCT TERM 744 1819402 - 1819418 + G 76 -2.9 -5.11937 | overlap 1819404 ATGGCTGGTGTGGTT GGTGCTG CTG TAGCAAC TTTTTTCACATTCTT Mthe_1673 1818223 - 1819686 + | polysaccharide biosynthesis protein Mthe_1674 1819708 - 1820493 + | glycosyl transferase family protein Mthe_1675 1821606 - 1820506 - | glycosyl transferase, group 1 TERM 745 1821202 - 1821216 + g 74 -2.8 -4.84017 | opp_overlap 1821202 CTTTTTTGAAACAAA TGTAAC ATA GTCACA TTTTTCTAAAAGCTT TERM 746 1821216 - 1821202 - G 70 -5 -4.41348 | opp_overlap 1821202 CTTTTTTGAAACAAA TGTAAC ATA GTCACA TTTTTCTAAAAGCTT Mthe_1676 1822711 - 1821743 - | glycosyl transferase, group 1 TERM 747 1822075 - 1822101 + g 70 -2.9 -4.8048 | opp_overlap 1822075 CATCCCGTGAAACAC GTCCTAAGATC TTCAC GTTCTCAGGGC TTTTTGATCTCAGAA Mthe_1677 1823733 - 1822756 - | glycosyl transferase, group 1 Mthe_1678 1824907 - 1823786 - | glycosyl transferase, group 1 Mthe_1679 1825053 - 1826177 + | nucleotidyl transferase Mthe_1680 1826178 - 1827995 + | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TERM 748 1828025 - 1827999 - f 77 -8.6 -4.18197 | ACGGTGGAGTGAAAA GCAGCCGGCTCA GCC TGAACCGCCAGC GTATGCAGGGTTGGA TERM 749 1828608 - 1828623 + F 76 -9 -3.85603 | opp_overlap 1828596 1828607, overlap 1828607 ATCGGAACTAACAGT GCCTGA GGGA TCAGGC TATTTATTTGGTGAC Mthe_1681 1829006 - 1829803 + | periplasmic solute binding protein Mthe_1682 1831205 - 1830003 - | phosphoserine phosphatase SerB Mthe_1683 1832270 - 1831449 - | transcriptional regulator, TrmB Mthe_1684 1832411 - 1833829 + | radical SAM domain-containing protein Mthe_1685 1834104 - 1835039 + | HPr kinase Mthe_1686 1835443 - 1835060 - | translation initiation factor IF-5A Mthe_1687 1836293 - 1835742 - | putative PAS/PAC sensor protein Mthe_1688 1836634 - 1836407 - | hypothetical protein Mthe_1689 1836668 - 1838341 + | hypothetical protein TERM 750 1840613 - 1840583 - g 81 -12.6 -3.06162 | overlap 1840607 TACTGGAGGCGAAGA GCCGTACTCGTACC AGT GGTACAAGGACGAC AGTCCGATAACAGGA TERM 751 1841111 - 1841081 - g 81 -12.6 -3.06162 | overlap 1841105 TACTGGAGGCGAAGA GCCGTACTCGTACC AGT GGTACAAGGACGAC AGTCCGATAACAGGA TERM 752 1842107 - 1842077 - g 81 -12.6 -3.06162 | overlap 1842101 TACTGGAGGCGAAGA GCCGTACTCGTACC AGT GGTACAAGGACGAC AGTCCGATAACAGGA Mthe_1690 1838502 - 1846643 + | hypothetical protein TERM 753 1846674 - 1846654 - T 71 -10.4 -2.88337 | opp_overlap 1846651 1846650 1846646 1846654, overlap 1846651 AGTAGAGCAGAAGGA CGGCGGGA GGTCA TCCCGCCA CTCATTTGTTTTCTC Mthe_1691 1847363 - 1846719 - | carbonic anhydrase Mthe_1692 1848679 - 1847522 - | hypothetical protein Mthe_1693 1849809 - 1848709 - | glutamate--cysteine ligase, GCS2 TERM 754 1849439 - 1849449 + g 78 -6.8 -4.66537 | GCCTGAATGTTCAGC CAGC CGT GCTG TTTTATGTTGAAGAG TERM 755 1849628 - 1849610 - G 88 -11 -4.16182 | CCACCATAAAGCAAA GCCTCCAG CTC CTGAAGGC TCTCAGCCGGTGGCG Mthe_1694 1850296 - 1849790 - | hypothetical protein TERM 756 1850166 - 1850191 + g 72 -11.9 -2.61264 | opp_overlap 1850154, overlap 1850165 1850187 TCATCAGGGCGTAGA CCTGCGGAGAT CAGA ATCTCCGCACG CTTCTCCGTAAGAGG Mthe_1695 1851305 - 1850298 - | RimK domain-containing protein ATP-grasp Mthe_1696 1851946 - 1851302 - | hypothetical protein Mthe_1697 1854117 - 1852108 - | hypothetical protein Mthe_1698 1854450 - 1855013 + | hypothetical protein Mthe_1699 1855010 - 1855642 + | protein-L-isoaspartate O-methyltransferase TERM 757 1855743 - 1855722 - T 76 -9.5 -3.6422 | gap 1, overlap 1855720 GAGTGTCTCAAAACA GCCTGATGCA CCC TGCA-CAGGC ATAATCGGCCGTCAC Mthe_1700 1856760 - 1855807 - | hypothetical protein Mthe_1701 1858292 - 1856943 - | hypothetical protein Mthe_1702 1859523 - 1858558 - | putative rRNA pseudouridine synthase Mthe_1703 1860118 - 1859600 - | cytidylate kinase Mthe_1704 1860720 - 1860115 - | hypothetical protein Mthe_1705 1862330 - 1860717 - | preprotein translocase subunit SecY Mthe_1706 1862701 - 1862327 - | ribosomal protein L15 rpl30p 1863161 - 1862706 - | 50S ribosomal protein L30P TERM 758 1862813 - 1862826 + g 71 -8.1 -3.86346 | TCCTCGGAGGGTGGA GCCTG AACA CAGGC TTTATGCCGAAGTCC TERM 759 1862978 - 1862993 + g 74 -7.6 -4.07568 | CGAGGATCATGGTGA GCAGAT CAGC ATCTGC TTTTCCCCAGGCGAC rps5p 1863775 - 1863164 - | 30S ribosomal protein S5P rpl18p 1864289 - 1863780 - | 50S ribosomal protein L18P rpl19e 1864754 - 1864296 - | 50S ribosomal protein L19e Mthe_1711 1865142 - 1864756 - | ribosomal protein L32e Mthe_1712 1865679 - 1865149 - | ribosomal protein L6 Mthe_1713 1866078 - 1865689 - | 30S ribosomal protein S8P Mthe_1714 1866231 - 1866088 - | ribosomal protein S14 rpl5p 1866737 - 1866228 - | 50S ribosomal protein L5P TERM 760 1866459 - 1866478 + g 80 -4.3 -4.99043 | gap 1, overlap 1866450 TCCGAAGGCGAAGTT GCC-GTTC TCATC GAACTGGC TTTTCTTTATCACGC Mthe_1716 1867435 - 1866734 - | 30S ribosomal protein S4e rpl24p 1867791 - 1867441 - | 50S ribosomal protein L24P TERM 761 1867473 - 1867501 + g 71 -8.1 -3.78736 | TCTCGCGCTCATCGT CGTCGAGATCAAG CTT CGTGATCATGACG TTTGATGGATGTATG rpl14p 1868195 - 1867797 - | 50S ribosomal protein L14P Mthe_1719 1868512 - 1868192 - | ribosomal protein S17 Mthe_1720 1868799 - 1868509 - | ribonuclease P, Rpp29 Mthe_1721 1869002 - 1868799 - | ribosomal protein L29 rps3p 1869810 - 1868980 - | 30S ribosomal protein S3P Mthe_1723 1870270 - 1869812 - | ribosomal protein L22 rps19p 1870690 - 1870280 - | 30S ribosomal protein S19P rpl2p 1871413 - 1870703 - | 50S ribosomal protein L2P Mthe_1726 1871672 - 1871424 - | ribosomal protein L25/L23 rpl4lp 1872424 - 1871669 - | 50S ribosomal protein L4P TERM 762 1872305 - 1872327 + g 81 -12 -3.53733 | overlap 1872282 1872303 GGGCTGCAGTCTGTT GGCCTGTGCT GCA AGCACAGCCC TCTTTATGAGATCCG rpl3p 1873444 - 1872437 - | 50S ribosomal protein L3P Mthe_1729 1874278 - 1873445 - | hypothetical protein Mthe_1730 1874440 - 1875237 + | band 7 protein Mthe_1731 1875250 - 1876515 + | hypothetical protein Mthe_1732 1877377 - 1876508 - | acetylglutamate kinase Mthe_1733 1879212 - 1877509 - | pyruvate carboxylase subunit B