TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.339874 %AT, 3853783 nt, 35079 terms. Intergenic: 0.371034 %AT, H2T: 373245 nt, 2632 terms; T2T: 147717 nt, 2139 terms; H2H: 157804 nt, 2326 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|224988383|ref|NC_012207.1| Mycobacterium bovis BCG str. Tokyo 172, complete genome (length 4371711) dnaA 1 - 1524 + | chromosomal replication initiation protein dnaN 2052 - 3260 + | DNA polymerase III subunit beta recF 3280 - 4437 + | DNA replication and repair protein JTY_0004 4434 - 4997 + | hypothetical protein TERM 1 5162 - 5134 - g 71 -3.1 -4.61231 | gap 1, overlap 5137 5138 5145 TTAGATGGGTAAAAA CGAG-GCCAGAA GATCGG CCCTGGCGCCCG ATCACGGTACAGTGG gyrB 5123 - 7267 + | DNA gyrase subunit B gyrA 7302 - 9818 + | DNA gyrase subunit A TERM 2 10383 - 10407 + G 72 -13.5 -3.17723 | GATCGAGAGGGGATT CGGCCGCCGGT TCG AGCGGCGGTCG TTCGATTACCGCTGA JTY_0007 9914 - 10828 + | hypothetical protein JTY_0008 12311 - 11874 - | hypothetical protein TERM 3 12386 - 12427 + H 76 -8.5 -4.1891 | gap 1, overlap 12389 CACAGACTGCCATCA CTGGCCCGTCGGCGGGCTCG TTG CGGGTGCGCCG-CGTGCGGG TTTGTGTTCCGGGCA ppiA 12468 - 13016 + | putative iron-regulated peptidyl-prolyl cis-trans isomerase A TERM 4 13238 - 13222 - T 79 -8.7 -4.38712 | CCCAGCGGGACAAAA TCAGCAG CCC CCGCTGA CCGTTTCGATCTCGA JTY_0010 13557 - 13222 - | hypothetical protein JTY_0011 13994 - 13713 - | probable conserved transmembrane protein TERM 5 13916 - 13965 + g 70 -8.6 -3.9461 | gap 1, overlap 13926 13936 ATACGCTCGACGGTC CGACCTTCACCTTCATCGGCGTG CGGCT CACCGCGCTGACGGTGAAG-TCG TTCTTCTTGCGGACC JTY_0012 14088 - 14876 + | hypothetical protein trpG 14913 - 15611 + | para-aminobenzoate synthase component II pknB 17469 - 15589 - | transmembrane serine/threonine-protein kinase B TERM 6 15638 - 15649 + g 72 -7.2 -4.25104 | overlap 15629 15646 CGGTTGACGCCGGTC CCCG CCGG CGGG TTTTGATAGACGACC TERM 7 16671 - 16687 + g 76 -8.7 -4.20883 | overlap 16656 CGGCGCGCATCTCCG CCGCTGT CTG ATAGCGG TTTTCCGGATTTTTG pknA 18761 - 17466 - | transmembrane serine/threonine-protein kinase A pbpA 20233 - 18758 - | probable penicillin-binding protein rodA 21639 - 20230 - | putative cell division protein TERM 8 20258 - 20275 + g 70 -8.3 -4.00042 | ATGACCTCGGTGCCG GCCGCCG TAAT CGGCGAC TTATTTCGTGGGCGG ppp 23180 - 21636 - | serine/threonine phosphatase TERM 9 23193 - 23236 + r 93 -17.5 -3.51365 | CACTCTCCCCCGCAA GCGGGTGGGGGTAC-CCCCCA CTTG TGGGGGCGCGCCCCCA-CCGC TTCTCTGCGCTCTGC JTY_0019 23736 - 23269 - | hypothetical protein TB39.8 25425 - 23860 - | hypothetical protein JTY_0021 26862 - 25894 - | hypothetical protein whiB5 27423 - 27004 - | probable transcriptional regulatory protein whiB-like JTY_0023 27576 - 28346 + | putative transcriptional regulatory protein JTY_0024 28343 - 29176 + | putative secreted protein P60-related protein TERM 10 29554 - 29538 - g 78 -6.5 -4.58395 | opp_overlap 29529, overlap 29551 TCGATCGCGCAAAAA GCGCTGT GCT AAAGCGC CTGCGGGCACAGTAC JTY_0026 29225 - 29587 + | hypothetical protein JTY_0027 29702 - 31135 + | hypothetical protein JTY_0028 31173 - 31490 + | hypothetical protein JTY_0029 31498 - 31803 + | hypothetical protein JTY_0030 32041 - 33138 + | hypothetical protein JTY_0031 33208 - 33537 + | hypothetical protein JTY_0032 33566 - 33778 + | putative remnant of a transposase TERM 11 35680 - 35693 + G 81 -3.8 -5.00616 | CACGTCTCGCTTGAG CAGG AACTAG CCTG TTTTTTGGGCAAACC bioF2 34279 - 36594 + | putative 8-amino-7-oxononanoate synthase acpA 36591 - 36854 + | putative acyl carrier protein JTY_0035 36851 - 37246 + | hypothetical protein TERM 12 38480 - 38492 + G 79 -4.8 -4.77165 | AAGGCTTCTGCGACA CCCA CGACT TGGG TTTTCTTGTAGACGA fadD34 37243 - 38931 + | putative fatty-acid-CoA ligase JTY_0037 39812 - 39132 - | hypothetical protein JTY_0038 41185 - 39860 - | putative integral membrane protein TERM 13 40038 - 40022 - G 70 -6.5 -4.24948 | overlap 40024 GTATGAGACCCAAAA CAGTGCA TCC TGCACGG CGAACACGTGCCCGC JTY_0039 41287 - 41895 + | hypothetical protein JTY_0040 42334 - 41987 - | putative transmembrane protein mtc28 43348 - 42416 - | secreted proline rich protein TERM 14 45216 - 45231 + G 71 -3.2 -4.63218 | GAGCTGCCTGATGTC CCGG ACTACTCG CCGG TTTTGTTCGACCCCG leuS 43545 - 46454 + | putative leucyl-tRNA synthetase JTY_0043 47190 - 46564 - | putative transcriptional regulatory protein JTY_0044 48083 - 47349 - | putative transcriptional regulatory protein JTY_0045 49010 - 48216 - | putative oxidoreductase JTY_0046 49922 - 49026 - | putative hydrolase ino1 51107 - 50004 - | myo-inositol-1-phosphate synthase TERM 15 50519 - 50553 + g 70 -10.6 -3.61398 | overlap 50520 CCTGGCTCTTGATGT CATCACCGACGATGGG TAC CCCGGCGTCGGTGAAC TTCTTGGCCCACACC JTY_0048 51710 - 51168 - | hypothetical protein TERM 16 51513 - 51546 + g 73 -13.1 -3.30124 | gap 1, opp_overlap 51507 51506 TTGGTAAACGCGTCG TGCTCGCCGCACCGGG GTG CCCGCTGGGGCG-GCA TTCTCGGCGATCAAC JTY_0049 52680 - 51811 - | hypothetical protein TERM 17 52260 - 52300 + g 70 -10.4 -3.73224 | gap 2 CGAGGGAATGCAGCT GCCTGGGCGGGGTCAGCACC ACG GGGGC-GATCCCGTC-GGGC TTTGCTCCGGGATCC TERM 18 52429 - 52451 + g 71 -9 -3.87815 | opp_overlap 52411, overlap 52417 52418 52430 CAACTCGGTGCGTTT CGCCCGCGAT TTG AGCGCGGGCA TTTGTGCGGGTGCGC TERM 19 52613 - 52593 - G 71 -12.5 -3.28712 | opp_overlap 52590 52588 52596, overlap 52594 GGGCGTCGTCGAGAA TCCGGCAGG CGT CCTGCCGGT CGCTGTCTTTGGCGC TERM 20 52612 - 52594 - G 74 -16 -2.57132 | opp_overlap 52590 52588 52596, overlap 52593 GGCGTCGTCGAGAAT CCGGCAGG CGT CCTGCCGG TCGCTGTCTTTGGCG JTY_0050 52814 - 53227 + | hypothetical protein TERM 21 53848 - 53866 + G 76 -8.8 -4.20368 | TGCGCCAGGCGGTGA TTGCGGCC GAA GACCGCAA TTTCTATTCGAATCC ponA1 53646 - 55691 + | putative bifunctional penicillin-binding protein 1A/1B TERM 22 56250 - 56286 + G 70 -11 -3.57462 | gap 1 CCCTCCCGGTGGTTG CCGAA-GTGGTGATGTT CTTC AACGTCGCCGCGTTCGG TTTGGCGCTGGCGTG JTY_0052 55688 - 57370 + | putative transmembrane protein JTY_0053 57402 - 57965 + | hypothetical protein rpsF 58184 - 58474 + | 30S ribosomal protein S6 ssb 58578 - 59072 + | single-strand DNA-binding protein rpsR1 59114 - 59368 + | 30S ribosomal protein S18 TERM 23 59594 - 59573 - g 70 -3.6 -4.54727 | overlap 59574 CCCGCGAAACCAAAA GCGTACGC GACCTA GAGCACGC CAACGAGATCAAGGC rplI 59401 - 59859 + | 50S ribosomal protein L9 JTY_0058 59888 - 60409 + | hypothetical protein TERM 24 60778 - 60765 - g 75 -9.5 -4.07885 | CATCGTTGCCGAAAA GGCGC TGCT GCGCC GGCTGGTAGAGGCCG dnaB 60388 - 63012 + | replicative DNA helicase JTY_0060 63192 - 63884 + | hypothetical protein JTY_0061 63901 - 64959 + | hypothetical protein JTY_0062 64983 - 65408 + | hypothetical protein TERM 25 65499 - 65459 - f 73 -11.1 -3.61774 | GAGAACAGCCTGAAA TCCTGTTCGGTTGATGCCG TGC CGGCATCGACGTACCAGGA CGAGGCACTGACTCG TERM 26 65983 - 66015 + G 71 -12.5 -3.32819 | CGGTTGCCAGGTACA CCGGAGCGGCGCAGG CGG CCGGCGCCATGCCGG TTCTGACGCTGTATG celA1 65544 - 66686 + | putative cellulase TERM 27 67439 - 67482 + G 71 -14.4 -2.88579 | TGTCGCGGGACACGC GCTGGGCGGCGGGCTGGG CGCCAATT CCCGGCACGCCGGCCTGC TCTGTGACCAATTGA JTY_0064 66915 - 68354 + | putative oxidoreductase TERM 28 69406 - 69445 + G 73 -3.5 -4.58283 | GCTTGTGCTGGTGGC GATTGCGGTATTGTGTG CGGTGT CATTCTTTACCGCGATC TTTTTGCGCGACTTG JTY_0065 68612 - 71551 + | hypothetical protein JTY_0066 71618 - 71857 + | hypothetical protein, antitoxin JTY_0067 71850 - 72251 + | hypothetical protein icd2 74540 - 72303 - | putative isocitrate dehydrogenase TERM 29 72437 - 72450 + g 74 -2.3 -4.72272 | CGGTGAGCTCTCGCA CGATG ACGT CTTCG TTTTTGGTCAACACA JTY_0069 75227 - 74658 - | putative transcriptional regulatory protein TERM 30 75254 - 75302 + H 100 -25.3 -3.14564 | opp_overlap 75243 75254, overlap 75255 GAAAGCCTTGACAAA GCGGGGCGCGCGTTCCGTATAGT TCG GCTAAGCGGAGCGCTCGCCCCGC TTAGTCAAAGCATAG TERM 31 75302 - 75254 - H 100 -20.2 -3.88583 | opp_overlap 75254 75255, overlap 75243 GAAAGCCTTGACAAA GCGGGGCGCGCGTTCCGTATAG TTCGG CTAAGCGGAGCGCTCGCCCCGC TTAGTCAAAGCATAG JTY_0070 75330 - 76241 + | short chain dehydrogenase sdaA 77651 - 76266 - | putative L-serine dehydratase TERM 32 77240 - 77224 - G 81 -8.7 -4.44608 | CCCACCGAAAAATAA GTCTCGG TGG CCAAGAC GCGGCCGTGTGGGCC glyA2 78925 - 77648 - | putative serine hydroxymethyltransferase TERM 33 79195 - 79217 + H 74 -13.4 -2.88579 | overlap 79185 CTACACCTTCGGTCA GGCACGGTCG GTG CGACCGTCCC TGTCTCCAGAGTTGC JTY_0073 79515 - 80267 + | putative maturase TERM 34 80745 - 80788 + G 74 -7.5 -4.17048 | gap 1, overlap 80745 GAGAAAGCGCCGCCT G-GTCATCACGATCATCAGC ACCGG GCTGATCTTCGGGATGACGC TTGTTTTGACCGGAC TERM 35 80873 - 80891 + G 76 -6.6 -4.47551 | overlap 80875 ATGTATTCGTCGTCA GATCCGGC GCT GCTGGACC TTTTCTGGGTTCAAT JTY_0074 80698 - 81747 + | putative glutamine-transport transmembrane protein ABC transporter JTY_0075 81750 - 82742 + | putative glutamine-transport ATP-binding protein ABC transporter JTY_0076 82822 - 84057 + | hypothetical protein TERM 36 84422 - 84435 + G 77 -5.2 -4.60487 | overlap 84414 TCGCGTTGCCGGTTC CGGC TTACAT GCCG TTTTTCGACGTCCTG JTY_0077 84070 - 85242 + | putative aminotransferase JTY_0078 85646 - 85257 - | hypothetical protein JTY_0079 86540 - 85710 - | putative oxidoreductase JTY_0080 86602 - 87207 + | putative transcriptional regulatory protein JTY_0081 87875 - 87282 - | hypothetical protein JTY_0082 88084 - 87872 - | hypothetical protein JTY_0083 88278 - 89099 + | hypothetical protein JTY_0084 89096 - 89554 + | hypothetical protein JTY_0085 89649 - 89993 + | putative transcriptional regulatory protein TERM 37 90180 - 90231 + G 70 -9.9 -3.71848 | gap 1 TGGCCCGGTGTATGA CGCGGAG-CGGTTCGGGGCGCGGC TGGTC GCCTCGCCCCGACACGCCGATGCG TTGTTGGTGACCGGC JTY_0086 89998 - 90477 + | putative oxidoreductase TERM 38 91497 - 91532 + G 71 -3.1 -4.59773 | gap 1, overlap 91502 GACCTGGACCTGCTC GGCGG-GCTGGCCCGC CGAAT GCCGGCGACCACCGTC TTTTTCGGGGTGGCC JTY_0087 90474 - 92402 + | putative oxidoreductase TERM 39 92608 - 92568 - g 80 -16.9 -2.78606 | gap 1, opp_overlap 92596, overlap 92563 92561 92570 GCAAGCAACAGATCA CACCGGCGGGGACGACGA TCGTGT TCGCCG-CCGCGCCGGTG ATCGTCGCCGGGACA TERM 40 92606 - 92570 - g 71 -13.7 -2.9329 | gap 1, opp_overlap 92596, overlap 92568 92563 92561 AAGCAACAGATCACA CCGGCGGGGACGACGA TCGTGT TCGCCG-CCGCGCCGG TGATCGTCGCCGGGA hycD 92402 - 93352 + | putative formate hydrogenlyase hycP 93363 - 94025 + | putative hydrogenase hycQ 94025 - 95491 + | putative hydrogenase TERM 41 95957 - 95970 + G 74 -5.2 -4.52589 | overlap 95942 CCGGCCTCATCGAAC CCGG TCACTT CCGG TTTTCTGTCGCGGGC hycE 95488 - 96966 + | putative formate hydrogenase JTY_0092 97001 - 97675 + | hypothetical protein JTY_0093 97832 - 98425 + | putative methyltransferase/methylase JTY_0094 98554 - 99324 + | hypothetical protein mtn 99758 - 100525 + | putative bifunctional MTA/SAH nucleosidase JTY_0097 103737 - 102889 - | hypothetical protein ctpA 100657 - 102942 + | putative cation transporter p-type ATPase A TERM 42 103095 - 103071 - GT 70 -6.4 -4.22652 | gap 1 GCAGATGAGTCAAAA TCC-GCGTGGT GCTG ACCGCGCCGGA CAGCGCATCCACAAT JTY_0098 104737 - 103784 - | hypothetical protein TERM 43 103915 - 103927 + gTr 71 -3.3 -4.57569 | overlap 103913 CGTGGGTGTTTTTGC GGGTG GTC CAGCC TTTTTCGGCGAGTCG TERM 44 104241 - 104271 + gTr 77 -12.5 -3.57792 | ATGGGTAGCAGGGTG CCGCCGCCGGTGA AGCCC TTGCCGGCGCCGG TTTGCAGGTCGGTCA JTY_0099 105290 - 104508 - | hypothetical protein TERM 45 104794 - 104768 - GH 74 -5 -4.57073 | overlap 104769 CAGGTGGGCGAAAAA GGGCGCGAATCA CTT TGATGTGCGCCT CGCCGATCAGGCCCT PPE1 105399 - 106790 + | PPE family protein JTY_0101 106809 - 107678 + | putative oxidoreductase JTY_0102 107675 - 108226 + | hypothetical protein fadD10 108231 - 109853 + | acyl-CoA synthetase JTY_0104 109858 - 110094 + | hypothetical protein TERM 46 114815 - 114769 - g 83 -12.1 -4.09685 | opp_overlap 114808 TGGCAGTGCTCAAAA CCGGGGCGGCGTATCTGCCGA TCGAT CCGGCGAATCCTCCGCCGCGG GTGGCGTTCATGCTC nrp 110076 - 117614 + | putative peptide synthetase JTY_0106 117789 - 119774 + | putative integral membrane protein ctpB 122248 - 119990 - | putative cation-transporter P-type ATPase B TERM 47 120054 - 120041 - G 79 -4.5 -4.79223 | overlap 120050 120051 TGACACGACGAAAAA TGACG AGAA CGCCA TGGCGGCACCGGCGA JTY_0108 122392 - 123906 + | hypothetical protein rpmB1 124339 - 124055 - | 50S ribosomal protein L28 JTY_0110 124449 - 125645 + | hypothetical protein ctpI 130617 - 125740 - | putative cation-transporter ATPase I TERM 48 128691 - 128656 - G 80 -14 -3.72027 | overlap 128659 ACCGGTGACCAACAA CAGCCCGGCCAAGGTG GTGC CACCTTGGGCGAGGTG TACCGCGGATTCACT TERM 49 129042 - 129012 - G 78 -10.2 -4.10657 | opp_overlap 129014, overlap 129015 CGACATGGCGCAAAA CCACCCGCGCTCCG GTT CGGTGCGCGGTCTG CAGCAGCGGGATTGC JTY_0112 131180 - 130971 - | hypothetical protein PE_PGRS1 131459 - 132949 + | PE-PGRS family protein TERM 50 133749 - 133763 + G 70 -4.2 -4.45664 | overlap 133751 ACTTGATCCAGGCCA CAGTGA CGA TCACCG TTTTGGTTGCGTTCG JTY_0114 133097 - 133846 + | putative integral membrane protein JTY_0115 134027 - 136084 + | putative transmembrane acyltransferase TERM 51 137266 - 137249 - g 70 -3.5 -4.44667 | gap 1, overlap 137245 GCTGGCAACAAGAAA TCTGTTTG ACT CAAAC-GA TTGCCGACATGTTCG gca 136366 - 137322 + | putative gdp-mannose 4,6-dehydratase TERM 52 137726 - 137744 + G 78 -5.9 -4.62783 | GCCCTCGAAGGATCT GCGCGTC CCGGC GACACGC TTTTTGCGATAAGTA gmhA 137396 - 137986 + | putative phosphoheptose isomerase JTY_0118 138018 - 138590 + | putative dehydratase JTY_0119 138590 - 139657 + | putative sugar kinase TERM 53 140051 - 140033 - T 71 -8.2 -3.84406 | opp_overlap 140033 140032 140035, overlap 140038 CCTGCAGGAGAAGAA CATGACCA CGA TGATCATG ACTTTTGTTGTTCCA JTY_0120 141100 - 140345 - | hypothetical protein TERM 54 141582 - 141610 + G 72 -7.3 -4.25104 | opp_overlap 141588 CGGTTCCCACCGCGT CAACGACGGCATC CCT GGTGCTGTCGGCG TTTTGCTCGGCGCAC oxyS 141278 - 142222 + | oxidative stress response regulatory protein oxcA 143954 - 142206 - | putative oxalyl-CoA decarboxylase TERM 55 145531 - 145567 + G 80 -15.1 -3.38291 | GTCGCGGCGGTGATT GTGCCTCGTGAGTCCGC CCC GCCGACTCGCGAGGAGC TTGTCCAGTTCTGCC fadD7 144127 - 145704 + | acyl-CoA synthetase fusA2b 147849 - 145705 - | elongation factor G TERM 56 146826 - 146795 - G 75 -9.4 -4.06719 | gap 1, opp_overlap 146793, overlap 146796 AAAAACGATGAGAAA TGGCCCGACAC-ATG GAC CGTCGTGTCGGGCCT GATGGTTCCGGAGAA TERM 57 146825 - 146796 - G 70 -12.9 -3.02405 | gap 1, opp_overlap 146793, overlap 146795 AAAACGATGAGAAAT GGCCCGACAC-ATG GAC CGTCGTGTCGGGCC TGATGGTTCCGGAGA JTY_0125 148419 - 147985 - | hypothetical protein TERM 58 148223 - 148241 + g 91 -12.4 -4.19506 | TCGAGATTGGCGAGC CGGCGCAG CCG CTGCGTCG TTTTCCGCTTCGCGT TERM 59 148650 - 148674 + G 70 -10.8 -3.55444 | gap 1, opp_overlap 148642 GAGACCAGTGCTATC GCGTCGAACGG ACGA CCGTT-GACGC TTTGACACATCCCGA JTY_0126 148568 - 148936 + | hypothetical protein JTY_0127 148933 - 149301 + | hypothetical protein TERM 60 149717 - 149771 + G 85 -14.1 -4.07687 | overlap 149720 CGCGGCTGCGCCGAC CACCGCCGTGCTGGCCGCGGGTGCC GATGA GGTGTCGGCGGCGATCGCGGCGCTG TTTTCCGGCCACGCT PE_PGRS2 149610 - 151226 + | PE-PGRS family protein TERM 61 151324 - 151311 - f 74 -2.3 -4.82901 | GTTGGTGTAGAAAAA TCCTG CCGC CCGGA CCCTTAAGGCTGGGA pepA 151378 - 152445 + | putative serine protease TERM 62 153511 - 153521 + G 76 -8.2 -4.16943 | TTCATGGCCGTGCGC CGGG AGT CCCG TTTTCCGATCTCGGA treS 152554 - 154359 + | trehalose synthase JTY_0131 154462 - 155829 + | hypothetical protein TERM 63 155835 - 155849 + F 71 -9.2 -3.8186 | CGCTAGCTGATACCG GCCGGG GTG TCCGGC TTATTGCTTGGCGTG JTY_0132 155897 - 156676 + | putative transmembrane protein TERM 64 156751 - 156799 + T 83 -15.4 -3.18264 | gap 1, opp_overlap 156759, overlap 156756 ACCCAGTGCGGATGT TCCACACATCGGCAGCAGCGC TGGCCGTT GCGCTGCTGCCGATGC-TGGC TTGCTGGCTCAGGCG TERM 65 156756 - 156795 + T 87 -19.4 -2.57244 | opp_overlap 156759, overlap 156751 GTGCGGATGTTCCAC ACATCGGCAGCAGCGC TGGCCGTT GCGCTGCTGCCGATGC TGGCTTGCTGGCTCA TERM 66 156792 - 156759 - T 93 -19.7 -2.87931 | opp_overlap 156756 156751 CGGATGTTCCACACA TCGGCAGCAGCGC TGGCCGTT GCGCTGCTGCCGA TGCTGGCTTGCTGGC fbpC 157830 - 156808 - | secreted antigen 85-C JTY_0134 158077 - 158532 + | hypothetical protein fadE1 159888 - 158545 - | putative acyl-CoA dehydrogenase TERM 67 158835 - 158860 + g 73 -5.9 -4.32034 | overlap 158836 GGGGCATCGCCACCT TGACCGCCGCG ATGT CGCGGCGCACC TTTTGATAGTCGTGG TERM 68 159712 - 159733 + g 77 -2.9 -4.91109 | overlap 159705 159715 CTGCAGCGGCCGCAG GATCGCC ATCGTGTC GGCGTTC TTTTTGTCGTAAGGA fgd2 161012 - 159930 - | putative F420-dependant glucose-6-phosphate dehydrogenase JTY_0137 161099 - 161581 + | putative acetyltransferase JTY_0141 163479 - 162874 - | putative transcriptional regulatory protein TERM 69 163912 - 163936 + G 100 -20.7 -3.53012 | GCGACGACCACCGGC GGCGGCGCCGG CTA CTGGCGCCGCC TTTCCACGGCAAGAG cyp138 163596 - 164921 + | putative cytochrome p450 138 msrA 165490 - 164942 - | methionine sulfoxide reductase A JTY_0144 165553 - 166056 + | hypothetical protein JTY_0145 166057 - 167079 + | putative oxidoreductase JTY_0146 167140 - 167520 + | hypothetical protein JTY_0147 167911 - 167501 - | hypothetical protein JTY_0148 167941 - 168867 + | hypothetical protein JTY_0149 170412 - 168934 - | putative transmembrane protein JTY_0150 170514 - 171356 + | putative transcriptional regulatory protein JTY_0151 171445 - 172398 + | hypothetical protein JTY_0152 172441 - 173373 + | hypothetical protein TERM 70 174525 - 174495 - g 70 -6.6 -4.18018 | overlap 174496 TCGCCGCAGCGAAAA CCGACGCTGCAGCC GAC GGCGGCGGGGTCGT CGTGGGCGGCGACTG JTY_0153 173468 - 174988 + | putative aldehyde dehydrogenase (NAD+) dependant JTY_0154 175063 - 175923 + | putative short-chain type dehydrogenase/reductase JTY_0155 175930 - 176898 + | putative quinone oxidoreductase JTY_0156 177182 - 176895 - | hypothetical protein PE1 179539 - 177773 - | PE family protein PE2 181126 - 179549 - | PE family protein ptbB 182215 - 181385 - | phosphotyrosine protein phosphatase fadE2 183428 - 182217 - | putative acyl-CoA dehydrogenase TERM 71 184627 - 184655 + G 86 -18.1 -3.14211 | TGGTGATCACCACCG CGCTGGTGCCGGG CCG CCCGGCGCCAACG TTGGTGACCGCCGCT pntAa 183852 - 184952 + | putative NAD(P) transhydrogenase subunit alpha pntAb 184953 - 185285 + | putative NAD(P) transhydrogenase subunit alpha TERM 72 186690 - 186671 - g 74 -7.8 -4.1822 | GGTGATGCGAAGAAA TCGGTGAC CGAA GTCTCCGA GGAACTCAAGGCGTT pntB 185282 - 186709 + | putative NAD(P) transhydrogenase subunit beta TERM 73 186742 - 186765 + F 93 -17.4 -3.53224 | AGACGGGCGGATACG CCGGCGGCGG GTAT CCGTCGCCGG TTTCGACCCCGCGTA JTY_0164 187015 - 187659 + | putative transcriptional regulatory protein PE3 189069 - 187663 - | PE family protein TERM 74 187858 - 187891 + g 80 -15.9 -3.33696 | GGGGCCTTGCACGGT CCCGGTCGCCAGGGC CGAG GCCACGGCGATCGGG TTGATTGGCGCGAAC TERM 75 189116 - 189132 + r 95 -15.1 -4.08945 | AGCCTAGAGCGCGCC CGCCGGG AAG CCCGGCG TTTTCGGCCAATCGT PE4 190669 - 189161 - | PE family protein JTY_0167 190837 - 192186 + | putative oxidoreductase adhE1 193365 - 192214 - | putative zinc-type alcohol dehydrogenase e subunit JTY_0169 193347 - 193802 + | hypothetical protein TB18.5 193856 - 194341 + | hypothetical protein JTY_0171 195170 - 194355 - | putative transcriptional regulatory protein fadD5 195225 - 196889 + | acyl-CoA synthetase yrbE1A 197093 - 197890 + | hypothetical integral membrane protein yrbE1B 197892 - 198761 + | hypothetical integral membrane protein TERM 76 199954 - 199970 + G 76 -15.1 -3.14211 | overlap 199965 199968 AACGCTCGCGGTGGC CCGGGGG GCG CCCCCGG TTGCTGGCAGCCGAT mce1A 198766 - 200130 + | MCE-family protein TERM 77 200185 - 200205 + G 85 -10.5 -4.1899 | TGGTGCTGCTGTTCT TCACGGTGA TGA TCATCGTGA TTTTCGGTCAGATGC mce1B 200127 - 201167 + | MCE-family protein mce1C 201164 - 202711 + | MCE-family protein mce1D 202708 - 204300 + | MCE-family protein lprK 204297 - 205469 + | putative MCE-family lipoprotein mce1E mce1F 205463 - 207010 + | MCE-family protein JTY_0181 207046 - 207687 + | putative MCE associated membrane protein TERM 78 208592 - 208581 - g 70 -2.2 -4.58395 | overlap 208552 GCGATCTTCCAAAAA TCGC GCGG GCAA TGGCGCCTCGACGAT JTY_0182 207684 - 208652 + | putative MCE associated transmembrane protein JTY_0183 208649 - 209203 + | putative MCE associated protein JTY_0184 209170 - 209904 + | putative MCE associated membrane protein lprO 211044 - 209935 - | putative lipoprotein TERM 79 210521 - 210556 + g 72 -5.8 -4.36914 | ACGTAGGCGCCCAGC GGTGAGCTGCAGCCGG TCGA CCGCCAGCTGCCCCCC TTTTGTCCGCGAACG JTY_0186 212482 - 211124 - | putative transmembrane protein JTY_0187 213243 - 212509 - | hypothetical protein sigG 214372 - 213260 - | RNA polymerase factor sigma-70 JTY_0189 214320 - 215159 + | putative lysophospholipase TERM 80 215943 - 215911 - g 75 -11.8 -3.62775 | overlap 215897 ACGACTCGGGAACAA CCCCGAGCTGCCCG GGGCA CGGGCCGCGCTGGG CCGGTGATCGGCGCG JTY_0190 215201 - 215950 + | hypothetical protein JTY_0191 215947 - 216456 + | hypothetical protein bglS 216501 - 218576 + | putative beta-glucosidase JTY_0193 218937 - 219599 + | putative O-methyltransferase JTY_0194 219718 - 220149 + | putative transmembrane protein ilvD 221955 - 220228 - | dihydroxy-acid dehydratase JTY_0196 222103 - 222393 + | hypothetical protein JTY_0197 222521 - 223762 + | putative integral membrane protein JTY_0198 223839 - 224897 + | hypothetical protein JTY_0199 226804 - 224957 - | hypothetical protein TERM 81 226465 - 226433 - G 78 -6.1 -4.67904 | TACCAATTCCAAAAA GTCGTCCGACTCGAC GAT GTCGGCAAGGACGAC TGCGCCCTGCTCGGC TERM 82 227187 - 227213 + G 88 -10 -4.42238 | TGTTGGGATTCGGGG CGGCGCTGGCCG GCA CCGTCATCGCCG TTTTGGTTCCGCTGG TERM 83 229223 - 229255 + G 72 -11.9 -3.53012 | TTGCGGTCCGTCGTC TTCGCCCATGCCCAG CGC CTGGGCCTGGACGCA TTTGAAGACGACGGA JTY_0200 227111 - 230695 + | putative drugs-transport transmembrane ATP-binding protein ABC transporter JTY_0201 231133 - 231768 + | putative two component transcriptional regulatory protein JTY_0202 231881 - 232465 + | putative transcriptional regulatory protein TERM 84 232810 - 232827 + G 74 -9.8 -3.86015 | GGCAATCACCTCGGC GGCGCC TACAGC GGCGCC TTTCTGAAGGCACTG TERM 85 234593 - 234563 - g 100 -24.1 -2.78384 | opp_overlap 234551 TTGGGCTGGACTACA CCGGCGACGACGG GCGCA CCGTCGTCGCCGG TGTCGCCCCGAACGC JTY_0203 232465 - 234711 + | putative oxidoreductase TERM 86 234731 - 234690 - T 100 -30.5 -2.78596 | opp_overlap 234690 234697, overlap 234660 234697 CATCCGCCGAGCAGA CGCAGAATCGCCCATTTGG TAGC CCAAATGGGCGATTCTGCG TCTGCTCGCGGGGTC TERM 87 234690 - 234731 + T 100 -30.5 -2.78596 | opp_overlap 234660 234690 234697, overlap 234697 CATCCGCCGAGCAGA CGCAGAATCGCCCATTTGG TAGC CCAAATGGGCGATTCTGCG TCTGCTCGCGGGGTC TERM 88 234724 - 234697 - T 95 -18.6 -3.40299 | opp_overlap 234697 234690, overlap 234690 CGAGCAGACGCAGAA TCGCCCATTTGG TAGC CCAAATGGGCGA TTCTGCGTCTGCTCG TERM 89 234697 - 234724 + T 95 -18.6 -3.40299 | opp_overlap 234690 234697, overlap 234690 CGAGCAGACGCAGAA TCGCCCATTTGG TAGC CCAAATGGGCGA TTCTGCGTCTGCTCG JTY_0204 236743 - 234752 - | putative zinc metalloprotease JTY_0205 236786 - 237445 + | hypothetical protein JTY_0206 237442 - 238131 + | putative transmembrane protein JTY_0207 238631 - 238128 - | hypothetical protein mmpL11 241528 - 238628 - | putative transmembrane transport protein JTY_0209 241750 - 242160 + | hypothetical protein TERM 90 242219 - 242235 + T 71 -11.5 -3.4072 | overlap 242208 GCGGTCGCCTACCGG GGCGGTG TCT CGCCGCC TTCTGGTCGCAGGTC JTY_0210 243495 - 242212 - | putative transmembrane protein TERM 91 244350 - 244366 + G 75 -4.3 -4.68424 | overlap 244313 244311 TGCCGCTGGCATTAC CGCTGGC CTC GCTGGTG TTTTTCGGTGCCTTC JTY_0211 243620 - 244723 + | putative transmembrane protein mmpL3 247554 - 244720 - | conserved transmembrane transport protein TERM 92 245423 - 245407 - G 74 -2.1 -4.7373 | overlap 245410 CGATGGCACTAAAAA CATCCGC ACC ACGGTCG CGTCCAGCAGCAGCG JTY_0213 248348 - 247620 - | hypothetical protein JTY_0214 249142 - 248351 - | tRNA (guanine-N(7))-methyltransferase TERM 93 249560 - 249589 + G 72 -14.3 -3.01712 | gap 1, opp_overlap 249540 249560 AGGACCGCGAAGCCA TCGCCGCCACCCGG CGC CCG-GTGGTGGCGG TGTTGAACAAGGCCG JTY_0215 249274 - 250359 + | hypothetical protein JTY_0216 250356 - 251834 + | hypothetical protein TERM 94 253385 - 253421 + G 75 -4.4 -4.62069 | opp_overlap 253363 GGCCGAGGGCAAGGT CGGCAATGTGCGCCG-CG ACC CGATGGC-CATGCTGCCG TTTTTGGGCTACAAC pckA 252018 - 253838 + | phosphoenolpyruvate carboxykinase TERM 95 253883 - 253856 - T 85 -15.6 -3.40299 | gap 1, opp_overlap 253856 CGAGCAGACGCATAA GCCCCCG-CACGC ACG GCGTGTCGAGGGC TTTAGTGTCTGCTCG TERM 96 253856 - 253883 + T 86 -13.4 -3.89956 | gap 1, opp_overlap 253856 CGAGCAGACGCATAA GCCCCCG-CACGC ACG GCGTGTCGAGGGC TTTAGTGTCTGCTCG nadR 254876 - 253905 - | putative transcriptional regulatory protein JTY_0219 256186 - 254873 - | putative methyltransferase fadD4 256300 - 257913 + | acyl-CoA synthetase fadE3 259121 - 257955 - | putative acyl-CoA dehydrogenase TERM 97 258089 - 258108 + g 70 -10.7 -3.56594 | overlap 258079 TCGAGTAGCCGTAGC CGCCGTG GATACG CACGGCG TTTAGGGCGATTTCC JTY_0222 259178 - 260191 + | hypothetical protein lipW 261096 - 260188 - | putative esterase JTY_0224 261189 - 262517 + | putative transmembrane protein JTY_0225 262519 - 263067 + | putative transmembrane protein lipC 263077 - 264318 + | putative esterase JTY_0228 265780 - 264971 - | putative aldehyde dehydrogenase JTY_0227 264332 - 265105 + | hypothetical protein JTY_0229 266127 - 265777 - | putative aldehyde dehydrogenase JTY_0230 266990 - 266226 - | putative methyltransferase JTY_0231 267026 - 268180 + | hypothetical protein JTY_0232 269927 - 268197 - | putative transmembrane protein JTY_0233 271202 - 269937 - | hypothetical protein JTY_0234 271418 - 272641 + | putative integral membrane acyltransferase JTY_0235 273349 - 272669 - | hypothetical protein TERM 98 273006 - 273042 + g 91 -12.2 -4.26076 | gap 1, opp_overlap 273005 CCGGCCTCAGCCAAC GGTTCCACC-GCCCGCC GCAC GGCGGGCCGGCTGAGCC TTTTGATCACGCTGG php 274326 - 273346 - | putative phosphotriesterase TERM 99 273376 - 273433 + g 74 -15 -3.05596 | overlap 273359 273359 273414 CTGCCGCTCGAAGAT GCGGCGCGG-GTTGTCGACGAGCATGGT GTGC AGC-TGCTCGTCGGTGACGCCGTGCTGC TTCAGTGCGGGGATG fadE4 274421 - 276127 + | putative acyl-CoA dehydrogenase JTY_0238 276262 - 276951 + | putative transcriptional regulatory protein nrdB 276948 - 277892 + | ribonucleoside-diphosphate reductase subunit beta TERM 100 277948 - 277907 - T 100 -24.1 -2.78384 | gap 1, opp_overlap 277907 277914 277946 277947, overlap 277914 GGCCTGGCGAGCAGA CGCAAAATCGCCCAATTTCG TGC CGAA-TTGGGCGATTTTGCG TCTGCTCGCCAGGGG TERM 101 277907 - 277948 + T 100 -24.1 -2.78384 | gap 1, opp_overlap 277907 277914, overlap 277914 277946 277947 GGCCTGGCGAGCAGA CGCAAAATCGCCCAATTTCG TGC CGAA-TTGGGCGATTTTGCG TCTGCTCGCCAGGGG TERM 102 277914 - 277941 + T 100 -13.6 -4.24948 | gap 1, opp_overlap 277914 277907, overlap 277907 CGAGCAGACGCAAAA TCGCCCAATTTCG TGC CGAA-TTGGGCGA TTTTGCGTCTGCTCG TERM 103 277941 - 277914 - T 100 -13.6 -4.24948 | gap 1, opp_overlap 277907 277914, overlap 277907 CGAGCAGACGCAAAA TCGCCCAATTTCG TGC CGAA-TTGGGCGA TTTTGCGTCTGCTCG gabD1 279503 - 277968 - | succinate-semialdehyde dehydrogenase (NADP+) dependant TERM 104 278115 - 278102 - G 74 -2.3 -4.82901 | TGCCGTTGATAAAAA CCTGG CCCG CCACG ATGTCGTCGATGAAG JTY_0241 280977 - 279529 - | putative transmembrane protein TERM 105 280124 - 280069 - G 76 -14.6 -3.17212 | gap 1, overlap 280111 CCAGTAGCTCAGCAA CAGCACCGCCGCGGTGAATACGACCAC GAG GCCGGCGAAC-CACTGCGGCGGTGCCG ACAGCGCCGGCTGGG TERM 106 280163 - 280111 - G 100 -21.1 -2.71144 | opp_overlap 280143, overlap 280069 GAGGCCGGCGAACCA CTGCGGCGGTGCCGACAGCGCCGGC TGG GCCGGCATCGGCAGCAGCGCCGCGG CCGAAGATGTGTCGA JTY_0242 285214 - 281012 - | putative transmembrane protein TERM 107 283517 - 283488 - G 70 -9.9 -3.72576 | CTGTCGTTGACGAAA CCCGCCAGCGGAT CAGG ACCCACCGGCGCG CCGAACTCCGCCAGC JTY_0243 285434 - 285261 - | small secreted protein TERM 108 285527 - 285553 + H 73 -8.1 -4.07687 | ACCCGGAGCGTATGC GCCA-CCGTGACA GCA TGTC-CGGATGGC TTTTCCACGCACACT lpqI 285549 - 286715 + | putative lipoprotein JTY_0245 286791 - 287405 + | putative transcriptional regulatory protein JTY_0246 287467 - 287700 + | hypothetical protein JTY_0247 287708 - 288145 + | hypothetical protein JTY_0248 289017 - 288175 - | hypothetical protein fabG4 290392 - 289028 - | 3-oxoacyl-(acyl-carrier protein) reductase TERM 109 290345 - 290333 - G 74 -5.5 -4.56597 | TTGCCTGGCCAAAAA CGATC CTG GACCG GAGTTGACAACCTGC TERM 110 291792 - 291779 - g 81 -3.7 -5.01732 | opp_overlap 291783 291784 291786, overlap 291780 291781 AAGGCGGCGAAAAAA GGCGG CGGA CCGCT GCGCGGGCTGATTTC fadA2 290534 - 291856 + | acetyl-CoA acyltransferase TERM 111 292034 - 292068 + T 100 -13.6 -4.66833 | opp_overlap 292034 292033 CAATCCCCTGGAAAG GGCCGCCGCTGG TGGGAGGGGAC CCAGCGGCGGTC TTTTTGGGCTTGCCC fadE5 293997 - 292162 - | putative acyl-CoA dehydrogenase TERM 112 294605 - 294564 - g 78 -13.7 -3.56821 | gap 1 ACGACATGGCCGAAA CTCACCG-GCGTGCCGATGC TGG GCATCAGCGTGCTCGGCGAG GCCCATGACGCCGCA JTY_0252 294369 - 294857 + | putative oxidoreductase TERM 113 295880 - 295899 + G 73 -12.2 -3.41569 | overlap 295870 295867 295879 TGGTTGGTATCGTCG GTACCTGC TTGT GCAGGTAC TCTTTGGCTCGGTCG JTY_0253 295173 - 296483 + | putative integral membrane protein JTY_0254 297226 - 296480 - | fumarate reductase iron-sulfur subunit TERM 114 296872 - 296896 + g 81 -5.6 -4.81083 | GTAGCTCCTTGGGTG GCGCGAAAGA CGGGA TCTCGCGCGC TTTTTGGTAGTTGAA sdhA 299167 - 297227 - | succinate dehydrogenase flavoprotein subunit JTY_0256 300019 - 299198 - | putative succinate dehydrogenase membrane anchor subunit JTY_0257 300392 - 300099 - | hypothetical protein hsp 301016 - 300537 - | heat shock protein TERM 115 301151 - 301195 + H 75 -4.4 -4.72386 | gap 1, opp_overlap 301134, overlap 301147 301170 CTGTCACACAGCCGG TCGCCAGGTGTGAT-CACA GCGTCATA TGTGCGTCACATTCGGCGA TTTTTCGGTAATTTG TERM 116 302718 - 302754 + G 71 -2.9 -4.63527 | gap 1 GTGGAGCAGTCCAAG GCGCTGTGCGAGCACT TCAGCC AGT-CGCGCGCGGAGC TTTTTGAAATCATCA nirB 301230 - 303791 + | putative nitrite reductase [NAD(P)H] large subunit nirD 303817 - 304173 + | putative nitrite reductase [NAD(P)H] small subunit cobU 304713 - 304189 - | putative cobalamin biosynthesis protein TERM 117 304524 - 304508 - G 71 -9.3 -3.85698 | opp_overlap 304507 304506 CGTGCCTCGGACAAA GCCGTCG CGA CGTCGGC CGTTTCCACCGTTAG cobQ1 306222 - 304738 - | cobyric acid synthase PPE2 307911 - 306241 - | PPE family protein TERM 118 306530 - 306565 + g 73 -9.6 -3.90744 | gap 1, overlap 306532 306546 TCGGGCGCCGCCGCG GCCGCTGGGGCCTCGGC GCT GTCG-GGTTCCGGCGTC TTCTTTCGAACGCCG TERM 119 306532 - 306563 + g 70 -10.8 -3.54488 | gap 1, overlap 306530 306546 GGGCGCCGCCGCGGC CGCTGGGGCCTCGGC GCT GTCG-GGTTCCGGCG TCTTCTTTCGAACGC TERM 120 307397 - 307437 + g 76 -14.8 -3.18383 | ATCTGGGGGGCTGGG GTGGTCTGCGG-TGCGGCGG CCA CCGCCGCGGTCG-AGACCGC TTGATAGCTGGCCAT TERM 121 307856 - 307830 - G 74 -15.8 -2.62184 | opp_overlap 307833 CCTCGGCCGACACCA GCAGCGGACCGG GCC CAGGCCCGCTGC TTAGCAGCGCCGAGT TERM 122 308346 - 308360 + G 71 -2.7 -4.64334 | overlap 308347 AGCTCTCAGCGACAG GCGCC TGGCC GGCGG TTTTGTTCCCAAGTT JTY_0264 308219 - 308437 + | hypothetical protein JTY_0265 309113 - 308658 - | hypothetical protein JTY_0266 309881 - 309138 - | hypothetical protein JTY_0267 311023 - 309878 - | uroporphyrinogen-III synthetase narK3 312532 - 311123 - | putative integral membrane nitrite extrusion protein TERM 123 311226 - 311203 - G 72 -8.8 -4.0641 | overlap 311218 CCCGACGCACATAAA TCGCCCAGGT CAAC ACCGAGGCGA CCAGGTAGAACACCC aac 313218 - 312673 - | aminoglycoside 2'-N-acetyltransferase JTY_0270 314130 - 313228 - | hypothetical protein JTY_0271 314779 - 314147 - | hypothetical protein JTY_0272 315867 - 314875 - | putative periplasmic iron-transport lipoprotein TERM 124 315472 - 315501 + g 82 -11.5 -4.07687 | gap 1, overlap 315427 GGTATCGGCGTCCAC CCCGGCGTTGATCG CCA CGATCAG-GTCGGG TTTTAAGGCGGCGAT TERM 125 315591 - 315552 - G 70 -13.4 -3.04144 | gap 1 TGTCCAGGTTCAATA CCGCCGGCCGCGCCC-CGC CGA GCTTGGGCGCCGCCCACGG CCACACCGCAAACGG oplA 319518 - 315889 - | putative 5-oxoprolinase TERM 126 318751 - 318703 - G 72 -12.9 -3.14548 | overlap 318693 AATAACATGATCGAA GCCGGCCAGCGCCGACATCCGCA CCA TGCCGACGATGCCGCCGGCCGGA CCAGACAGAATCGCG narU 319695 - 321086 + | putative integral membrane nitrite extrusion protein JTY_0275 321637 - 321128 - | hypothetical protein JTY_0276 322895 - 321702 - | hypothetical protein fadD2 322931 - 324613 + | acyl-CoA synthetase fadE6 326825 - 324630 - | putative acyl-CoA dehydrogenase JTY_0279 328072 - 326939 - | hypothetical protein TERM 127 327869 - 327828 - G 77 -13.1 -3.53343 | gap 1 AAGCTGCTTTCGAAA CCACGGAATCGGGTGTTCCA GCC CAGAA-ACCCGATGCCGCGG ATCGCCATGTACTCG JTY_0280 328689 - 328069 - | putative transcriptional regulatory protein TERM 128 328740 - 328713 - RH 78 -6.4 -4.63218 | CTCCCTGGAACAAAA CTGAACCTGA TGTTAGAT TCAGATTCAG AGCTTGGCCAGGCCG JTY_0282 330022 - 329297 - | putative transcriptional regulatory protein JTY_0281 328786 - 329367 + | hypothetical protein TERM 129 329978 - 329950 - Gf 100 -21.1 -2.87564 | overlap 329954 CCAGGCCGGCAGAGA GCAACTGGCGACG GCG CGTCGCCAGTCGC TCGGCGGCCTCGACG TERM 130 329974 - 329954 - Gf 91 -16.9 -3.32022 | overlap 329950 GCCGGCAGAGAGCAA CTGGCGACG GCG CGTCGCCAG TCGCTCGGCGGCCTC JTY_0283 330112 - 331032 + | hypothetical protein JTY_0284 331500 - 331072 - | hypothetical protein JTY_0285 331781 - 331524 - | hypothetical protein, antitoxin PE_PGRS3a 334616 - 331866 - | PE-PGRS family protein TERM 131 331898 - 331940 + g 72 -11.9 -3.55622 | gap 2 GCCCGTTCTCGCCGA GCAGCAGCC-CGC-CGGTGCC GCC GGCACCGGGCGTGGCCCCGGC TTTGCCGGCGTTGCC TERM 132 332140 - 332197 + g 85 -18.1 -2.51464 | opp_overlap 332166, overlap 332178 CTGCCGCCGGCGCCG CCGGCGCCGGCGGAGCCGAAGAGCAAG CCGC CGTTCCCGCCGGCGCCGCCGGCGCCGC CTTGCTGGATGCTGG TERM 133 332178 - 332198 + g 73 -13.9 -3.19642 | opp_overlap 332166, overlap 332140 CAAGCCGCCGTTCCC GCCGGCGCC GCC GGCGCCGCC TTGCTGGATGCTGGT TERM 134 332719 - 332686 - G 81 -11.5 -3.92324 | overlap 332681 332687 GCGCCGAAGAGCAAA CCGGCGTCGCCGCCG CGCC CGCCGGCCCCGCCGA TGCCAGCGACGCCTA TERM 135 333382 - 333352 - G 93 -19.6 -2.62616 | opp_overlap 333360 GGACCGGTGATAGCA GCGCCGCCGGCGCC GCC GGCGCCGCCGGAGC CGTTGAGCAGGCCGG TERM 136 333360 - 333413 + g 77 -16.5 -2.62263 | gap 1, opp_overlap 333352 GATAGCAGCGCCGCC GGCGCCGCCGGCGCCGCCGGAGCCGT TGA GCAGG-CCGGCGTTGCCGCCGGTGCC TCCTATCCCGCCGGT TERM 137 333978 - 333941 - G 72 -14.7 -2.73875 | opp_overlap 333968, overlap 333938 CGGCGCCGAAGAGCA GGCCGGCGTTGCCGCCG TCCC CGCCCGCACCACCGGCC CCGCCGGTGGTGTTC TERM 138 333968 - 333990 + g 100 -19.2 -3.34895 | opp_overlap 333941 333938 CGCCGTCCCCGCCCG CACCACCGGC CCC GCCGGTGGTG TTCGTTGAGGCTCCG PE_PGRS3 337579 - 334880 - | PE-PGRS family protein TERM 139 335392 - 335354 - G 83 -13.6 -3.8211 | GCCCAGGGAGAACAA GCCCGCGTTGCCGCCGGC CCC GCCGGCGCCGCCGGGGAC CGCGGCGGGGGTACC TERM 140 335627 - 335641 + g 71 -9.2 -3.78775 | overlap 335616 GTTCCCGCCGGTGCC GCCGGT GCC GCCGGC TTTAGTGCTGGCGCC TERM 141 336954 - 336910 - G 70 -13.4 -3.01712 | gap 1, overlap 336913 CGGCGGCGCCGAAGA GC-AGGCCGGCGTTGCCGCCA GCCC CGCCGGCGCCGCCGGCCCCGC CCGTGAGGGCTACTA TERM 142 336950 - 336913 - G 77 -16.1 -2.73875 | overlap 336910 CGGCGCCGAAGAGCA GGCCGGCGTTGCCGCCA GCCC CGCCGGCGCCGCCGGCC CCGCCCGTGAGGGCT TERM 143 337780 - 337803 + r 70 -11.6 -3.214 | overlap 337782 TGCTGGGGGATCTGG GCCGGCCGAC CATG GCTGGCCGGC TGTTGGTCTGATGGC PE_PGRS4 340333 - 337829 - | PE-PGRS family protein TERM 144 337874 - 337900 + g 77 -12.9 -3.55622 | GATCAGCCCGCTGGT GCCGCCGGCGC CGGGT GTGCCGCCGGC TTTCCCGCCGTTGCC TERM 145 339554 - 339496 - G 86 -18 -3.01712 | opp_overlap 339547, overlap 339538 339539 CGCCGGCGCCGAACA GCCCGCCAGAGCCGCCATCCCCGCCGGC GCC GCCGCCAAAGATGCCGAATCCGCCGGGC CCACCGGTGCCGCCG TERM 146 339601 - 339623 + g 77 -16.2 -2.52464 | opp_overlap 339580 CGTTTCCGCCGGATC CGCCGGCCCC GCC GGTGCCGGCG TCGGTTGCCCCGCCG TERM 147 339795 - 339760 - G 74 -14.6 -3.01712 | gap 1, overlap 339763 CGGCGGCCCCGAACA GC-ATGCCGGCGGCCCC GCC GGCGCCGCCGGCGCCGC CGGTCCCCGTGCTGG TERM 148 339791 - 339763 - G 80 -17.3 -2.73875 | overlap 339760 CGGCCCCGAACAGCA TGCCGGCGGCCCC GCC GGCGCCGCCGGCG CCGCCGGTCCCCGTG TERM 149 340470 - 340524 + H 100 -22.9 -3.11634 | gap 2, overlap 340471 TCTCCCACATTTATG CGGTCGGCGCGTCGGCCGACGGGAGCT GGC AGCACCCGTGGGCCG--GCGCCGAGCG TTCGCTGGTGTCCGG TERM 150 341125 - 341092 - g 76 -14.6 -3.18383 | gap 1, opp_overlap 341096 ATGGCGACCTATCAA GCGGTCGCCGAGGCC GCGGT GGCGTCGGC-ACCGC AGACCACCCCGGCGC TERM 151 341930 - 341967 + G 70 -8.3 -3.95073 | gap 1, opp_overlap 341917, overlap 341931 AAGCGCGGGCGCGGC GGCGGCGCCGTGTCACGC GGC GCG-GATACGGCGACGAG TTTATGGATATGAAC PPE3 340624 - 342234 + | PPE family protein TERM 152 342600 - 342621 + G 78 -6.5 -4.62069 | gap 1 CGCGCGTACCGGCTG CCTTGG-CCC GAC GGGACCACGG TTTTTGAGCTGGACC JTY_0291 342258 - 343166 + | hypothetical protein TERM 153 343564 - 343589 + G 74 -12.5 -3.53811 | opp_overlap 343559 343558 CAGCGTAAACGTCCG CCGGACCTGGC TGCC GCCCGGTCTGG TTTCGCCGCGCTGAC JTY_0292 343390 - 345285 + | hypothetical protein TERM 154 346752 - 346725 - g 70 -10.6 -3.55444 | gap 1, opp_overlap 346749 GCTGGAGGCGGCAAA GC-GGTTGAGGCC CTT GGCCTGAACCCGC CCCCGGTCCCCATCC JTY_0293 345282 - 346898 + | hypothetical protein TERM 155 347299 - 347356 + G 93 -9.3 -4.87626 | gap 4, overlap 347352 TCCTGACCCGGCGGC GTTGGCGTCGGTGCCGGGGTCACGTCGCC AATG GGAG-CGTGACCC-G-CAC-GACCCCGAC TTTTTGGTGTTGCGG TERM 156 348960 - 348935 - g 79 -8.9 -4.40333 | GGCAAAGAACACAAA GGCGTGGGC TTTTTGGT GCCCGCGCC CGGTGCCACCCCGAT TERM 157 349931 - 349894 - g 73 -13.3 -3.25823 | gap 1 CGCGCGCGACAGCAA CGTGCGGGTGGTCGGCGC CCT GCGCCGCCCGGCCG-ACG CCGTCCCGCACGACC TERM 158 350828 - 350849 + G 77 -10.1 -3.96148 | gap 1, opp_overlap 350827 GTGCAGTTGATCAAC CCGCTGGTCG ATG CGGCC-GCGG TTTCTGGTGAAACCC JTY_0294 346895 - 350887 + | hypothetical protein PE5 350884 - 351192 + | PE family protein TERM 159 351956 - 351969 + G 70 -2.3 -4.64676 | overlap 351957 GCCGCTGTTGTTCGC GCTGG GCTA CCAGA TTTTCTTCAACCTGG PPE4 351195 - 352736 + | PPE family protein esxG 352785 - 353078 + | hypothetical protein TB9.8 esxH 353108 - 353398 + | low molecular weight protein antigen 7 JTY_0299 353409 - 354296 + | hypothetical protein TERM 160 354530 - 354552 + G 71 -9.1 -3.76952 | gap 1, overlap 354531 CCGTGCAACTGAGTT TGGC-GCCCG TCGG CGGGCAGCCG TTTAGCTTGGATGCC JTY_0300 354343 - 355761 + | putative transmembrane protein JTY_0301 355758 - 357143 + | putative protease precursor TERM 161 357156 - 357181 + G 71 -12.5 -3.23216 | opp_overlap 357145 TGAACCCGATCCCTT CTTGGCCCGGC AGGG GCCGGGTCACG TTGGTGCTGCTGGCG JTY_0302 357140 - 358135 + | putative transmembrane protein JTY_0303 359324 - 358122 - | hypothetical protein tam 359431 - 360216 + | putative trans-aconitate methyltransferase JTY_0305 361008 - 360205 - | hypothetical protein JTY_0306 362415 - 361018 - | putative sulfatase TERM 162 362710 - 362755 + G 72 -7.3 -4.26903 | opp_overlap 362703, overlap 362709 362712 362713 CCAGACCACCGGAGT CATGTCGGCGGCCGCCGACGA GGTG TCTACGGCGGTTGCCGCGCTG TTTTCCTCGCATGCC TERM 163 363140 - 363118 - g 90 -18.4 -3.05384 | opp_overlap 363125 363126 CGGGGCCGGAGCGAA CGGCGGCGCC GGC GGCACCGCCG GCTGGTTCTTCGGCT TERM 164 363125 - 363142 + G 72 -14.1 -2.94759 | opp_overlap 363118, overlap 363126 GGAGCGAACGGCGGC GCCGGCG GCAC CGCCGGC TGGTTCTTCGGCTTC TERM 165 363209 - 363244 + G 78 -13.8 -3.61398 | opp_overlap 363202 GGCATCAACGGCGGT CTCGGCGGCGCCGGCG GCGA CGGCGGCAACGCCGGG TTCTTCGGCAACGGC TERM 166 363543 - 363495 - g 100 -28.7 -3.55444 | TCGGGATCGCGCAAA CCGGGGGCGCCGGCGGCGCTGGC GGT GCCGGCGGCGACGGCGCACCCGG TGGCAACGGCGGCAA TERM 167 364242 - 364275 + G 70 -13 -3.01712 | TTTTCAATGCCGGTA CCCCCGGCGCCGCC GGCACG GGCGGTGACGGCGG TGTTGGCGGGACCGG TERM 168 364360 - 364307 - g 83 -15.7 -3.53012 | GCGGCCGGCGGGAAA GGCGGGGCCGGCGGTAGCGGCGGCG TCAA CGGCGCCACCGGCGCCGACGGCGCC AAGGGCCTCGACGGT PE_PGRS5 362594 - 364414 + | PE-PGRS family protein JTY_0308 364557 - 364784 + | hypothetical protein JTY_0309 364781 - 365083 + | hypothetical protein JTY_0310 365131 - 365352 + | hypothetical protein JTY_0311 365349 - 365774 + | hypothetical protein TERM 169 366116 - 366126 + G 70 -8.2 -3.9122 | CCATGATGGAGCGCG GCGC GCA GCGC TTCTTTGCCGCGATA JTY_0312 365911 - 366543 + | putative transcriptional regulatory protein JTY_0313 366540 - 367448 + | putative dehydrogenase/reductase PPE5 370899 - 367456 - | PPE family protein TERM 170 369930 - 369958 + g 74 -12.3 -3.53012 | overlap 369933 CGAGGATCGTCGTGC CGGCGCCGCCCTG CAG CAGGCCGGCGATG TTTGCGAGGCCGGAG TERM 171 369933 - 369955 + g 71 -14.8 -2.60496 | overlap 369930 GGATCGTCGTGCCGG CGCCGCCCTG CAG CAGGCCGGCG ATGTTTGCGAGGCCG PPE6 376970 - 371043 - | PPE family protein TERM 172 371377 - 371367 - G 70 -2.4 -4.60487 | overlap 371368 371369 GACCACGTTCAAAAA GCCC GAC GCGC TGCCCGCTCCGGAGT TERM 173 372040 - 372027 - G 70 -2.3 -4.62069 | GCCCGAGTTGAAAAA GCCGA TGTT TCCGC TGCCCGAGTTGAACA TERM 174 375680 - 375643 - G 77 -12.7 -3.66654 | opp_overlap 375637, overlap 375644 375647 GATGTGAAGGGCAAA CGCATGCCCGGAATCGT CATC ACGCTTCCGGGCATGAC CATCACCTGATGTAT TERM 175 375679 - 375644 - G 77 -16.2 -2.79671 | opp_overlap 375637, overlap 375643 375647 ATGTGAAGGGCAAAC GCATGCCCGGAATCGT CATC ACGCTTCCGGGCATGA CCATCACCTGATGTA TERM 176 375676 - 375647 - G 77 -16.5 -2.66326 | opp_overlap 375637, overlap 375644 375643 TGAAGGGCAAACGCA TGCCCGGAATCGT CATC ACGCTTCCGGGCA TGACCATCACCTGAT JTY_0316 377173 - 377844 + | putative oxidoreductase JTY_0317 378314 - 377832 - | hypothetical protein JTY_0318 378372 - 379088 + | putative integral membrane protein JTY_0319 379190 - 379846 + | hypothetical protein JTY_0320 380407 - 379916 - | hypothetical protein JTY_0321 380431 - 381660 + | hypothetical protein JTY_0322 381815 - 383677 + | hypothetical proline and threonine rich protein JTY_0323 383749 - 384135 + | hypothetical protein JTY_0324 384800 - 384138 - | hypothetical protein TERM 177 384969 - 385026 + G 93 -10 -4.63218 | gap 5 GACCCGTCCCGGCCG GCCGCGCCGGCTGGTCCGACA-CCGGCGC CCGCC GCGCCGGCTG-CGG-CAA-CCGGTG-GGC TTTTGTTCCACGACG JTY_0325 384861 - 385745 + | putative beta-1,3-glucanase precursor JTY_0326 385794 - 386408 + | putative muconolactone isomerase glpQ2 387202 - 386432 - | putative glycerophosphoryl diester phosphodiesterase JTY_0328 388358 - 387564 - | putative integral membrane protein TERM 178 388685 - 388707 + G 72 -6.8 -4.2828 | opp_overlap 388670 CTGCGGGCGGTACGG CCTCGCCGAC TGC GCCGGCAGGG TTTTGGTCGGTGAGC TERM 179 388802 - 388835 + G 80 -15.3 -3.27022 | gap 1, opp_overlap 388797 CATGCGAAAGGCCGG CGTGCCAGCTGACGTC TCG GACG-CGGCGGGCACG TTCGTGTGCAATCAC pcp 388407 - 389075 + | pyrrolidone-carboxylate peptidase JTY_0330 389147 - 389809 + | hypothetical protein dcd 389841 - 390413 + | deoxycytidine triphosphate deaminase TERM 180 391077 - 391109 + G 81 -12 -3.96327 | gap 1 GTAGCCGTCCGCGAG CTGTACGCGCCGCTG CTGG CAGCGG-GCGTGCCG TTTCTGGTGACCGAT udgA 390519 - 391850 + | putative UDP-glucose 6-dehydrogenase JTY_0333 392510 - 391839 - | hypothetical protein JTY_0334 392611 - 393291 + | putative transcriptional regulatory protein JTY_0335 393298 - 393987 + | hypothetical protein cyp135A1 395304 - 393955 - | putative cytochrome P450 135A1 JTY_0337 395370 - 395972 + | putative transcriptional regulatory protein JTY_0338 396579 - 395953 - | hypothetical protein JTY_0339 397346 - 396606 - | hypothetical protein JTY_0340 397460 - 398626 + | putative dehydrogenase/reductase JTY_0341 398701 - 399486 + | hypothetical protein TERM 181 399788 - 399737 - g 100 -15 -4.63218 | gap 1, opp_overlap 399740 399783 399784, overlap 399740 GGTCGTCGAACAAAA GATCACCAGCGGCGAAGATCCGGGC ATC GCCAGGACCGGCGCCGC-GGCGTTC CGTGTGGTCCAAGAC TERM 182 399785 - 399740 - g 77 -15.3 -2.95538 | gap 1, opp_overlap 399740 399783 399784, overlap 399737 CGTCGAACAAAAGAT CACCAGCGGCGAAGATCCGGGC ATC GCCAGGACCGGCGCCGC-GGCG TTCCGTGTGGTCCAA JTY_0342 399513 - 399887 + | hypothetical protein rmlA 399917 - 400783 + | putative glucose-1-phosphate thymidylyltransferase PE6 401309 - 400794 - | PE family protein TERM 183 401096 - 401051 - G 79 -16.1 -2.90496 | gap 1, opp_overlap 401024 401087, overlap 401048 CGTGTGCGGAAATCA GTGCC-GCGACGGCCGCCGACA CCT CGTCTTCGGCCGCCGCCAGCAC GCGGGTCTTGTGGCG TERM 184 401588 - 401570 - R 70 -8 -4.07885 | opp_overlap 401571 401578 GACTCGGGCCGAAAA CCGGGCCG CTG CGGCGCAG TTGGTGGCGTTGGGG aspC 404422 - 403133 - | aminotransferase AlaT TERM 185 403662 - 403710 + g 72 -4.5 -4.49344 | gap 1 GTCAGGCACAACATA TCCGGGGCGATCGATGCCAGGC TGATGT GCTTGGCGTCG-TCGTAGAGGA TTTTGTCGTAGATTT JTY_0347 407101 - 404453 - | putative iron-sulfur-binding reductase TERM 186 404851 - 404890 + g 74 -12.2 -3.53811 | gap 1 GCGTCACCGGTGCGG CAGCCTTAGGAGCG-GCTT TCG GGGCGCGCTCCTGAGCCTG TTTGGCGGCCGTACC TERM 187 405486 - 405468 - G 72 -8.8 -4.16284 | opp_overlap 405467 405464 ACACCCTCGAACAAA CCGTCCAG GGT CTCGACGG CCTGTTGTGCCAGCT JTY_0348 409708 - 407210 - | putative transcriptional regulatory protein JTY_0349 409894 - 410433 + | hypothetical protein TERM 188 411022 - 411037 + G 72 -6.8 -4.2717 | overlap 411005 AGGTCGGCTTGGCTG CCCAGG TCGG TCTGGG TTTTACTGCCGTGAT iniB 410622 - 412061 + | isoniazid inductible gene protein TERM 189 412083 - 412111 + F 91 -15.3 -3.87815 | opp_overlap 412083 AGCCGATTTCACGAA CCGGTGGGGAC GTTCATG GTCCCCGCCGG TTTGTGCGCATACCG TERM 190 412111 - 412083 - f 73 -13.1 -3.16683 | opp_overlap 412083 AGCCGATTTCACGAA CCGGTGGGGAC GTTCATG GTCCCCGCCGG TTTGTGCGCATACCG TERM 191 412582 - 412613 + G 84 -14.4 -3.93695 | gap 1 GGGTCGAGGTCGGCG CGCCCAGCCCGCTGC TGC GGGGCGGGCTGG-CG TTTATCGATACTCCG iniA 412098 - 414020 + | isoniazid inductible gene protein TERM 192 414089 - 414104 + G 85 -5.4 -5.02074 | gap 1, overlap 414088 GGTGCGCCGGCCTAT CGTCAGC GTG GC-GACG TTTTTTGCCAGCTGG iniC 414017 - 415498 + | isoniazid inductible gene protein lpqJ 416201 - 415641 - | putative lipoprotein JTY_0354 416310 - 416720 + | hypothetical protein ansP2 418225 - 416762 - | putative L-asparagine permease TERM 193 418129 - 418108 - G 81 -5.1 -4.82901 | gap 1, overlap 418109 CGGCGCCGAGAAAAA GGCCGGTACC GAT GGCACC-ACC GAGAGCGATCATTTG TERM 194 418689 - 418713 + G 77 -2.7 -4.95876 | overlap 418690 GCGGCGCTGCGCGCT GGGTACCCGGC CTC GATGGGTATCA TTTTTGGTTATCGTT TERM 195 418960 - 418983 + G 74 -12.5 -3.53012 | AAGAAGCTCGTTGCC CGTGATCGC CGCACC GCGATCACG TTTCGACCCGACGCC JTY_0356 418564 - 419550 + | hypothetical protein JTY_0357 419553 - 420206 + | putative transcriptional regulatory protein JTY_0358 420209 - 420868 + | hypothetical protein dnaK 421095 - 422972 + | putative chaperone protein grpE 422969 - 423676 + | putative GrpE protein TERM 196 423957 - 423932 - g 95 -17.5 -3.80841 | opp_overlap 423920 AGGAGTACGACGAAA CCCGCCGCCTG TTCG CCGGCGGCGGG TTCGGCGGCCGTCGG dnaJ1 423712 - 424899 + | putative chaperone protein TERM 197 425018 - 425045 + G 76 -14.8 -3.09878 | gap 1 TGGGTTGGTCAGCCC GCGGCGCACCTCC GGT GGCGG-GCGCCGC TATTCCCTGCATGAC hspR 424899 - 425279 + | putative heat shock protein transcriptional regulator PPE8 435825 - 425302 - | PPE family protein TERM 198 428021 - 428009 - G 70 -6.2 -4.1822 | CCGGAGTTGAAGAAA CCGG TGTTG CCGG CGCCGGAGTTCAGGG JTY_0364 436620 - 435976 - | hypothetical protein TERM 199 436183 - 436156 - G 73 -9.7 -3.89881 | ATCAACGTGCAGAAA GGCGGTCCGGC TGATCG GCCGTCCCGCC GCATGCGAGATCATG TERM 200 436237 - 436219 - G 77 -10.2 -4.00756 | overlap 436230 CATGTGATCAAACAA CAGCGGCA ACA CGCCGCCG TGCACCGCGGAGTTG purA 437915 - 436617 - | adenylosuccinate synthetase JTY_0366 438006 - 438653 + | hypothetical protein JTY_0367 438664 - 439443 + | putative integral membrane protein JTY_0368 439885 - 439448 - | hypothetical protein JTY_0369 439968 - 440795 + | hypothetical protein TERM 201 441184 - 441209 + G 79 -16.2 -3.06492 | opp_overlap 441199 AAAGCTTGGCCCACT GCTCGACGGC ACCAAC GCCGTCGAGC TATTCGAGTCGATCG mgtE 441017 - 442399 + | putative Mg2+ transport transmembrane protein fba 443445 - 442411 - | fructose-bisphosphate aldolase TERM 202 442863 - 442877 + g 72 -5.6 -4.3898 | overlap 442856 CGTGCTCACCGGCGC CCAGCG CCT CGATGG TTTTCTCGAAGTCCT TERM 203 443879 - 443891 + G 79 -3.3 -5.02074 | opp_overlap 443873 GAAACACTATGTGAC CGAGT CCC ACGCG TTTTTTGAGAAGTAC JTY_0372 443541 - 444224 + | putative transmembrane protein JTY_0373 445343 - 444213 - | hypothetical protein TERM 204 444420 - 444395 - G 74 -14.7 -3.03338 | overlap 444384 AGAACGCCCCGAACA CCGGCAACCCG TCCA CGGTTTGCCGG TAATCCCACGCCGAT JTY_0374 445961 - 445368 - | hypothetical protein JTY_0375 446379 - 445990 - | hypothetical protein JTY_0376 447671 - 446460 - | hypothetical protein JTY_0377 448192 - 447677 - | putative membrane oxidoreductase TERM 205 447712 - 447746 + g 78 -6.3 -4.62069 | gap 1, opp_overlap 447706, overlap 447715 CCCAGATCAGCAGCA GCACGG-TCAGCGCCG CCAG CAGCGCCGAACCGTAC TTTTTGAGCTGGCCG JTY_0378 449189 - 448293 - | putative oxidoreductase JTY_0379 449779 - 449186 - | hypothetical protein JTY_0380 450531 - 449776 - | hypothetical protein JTY_0381 452949 - 450550 - | putative carbon monoxide dehydrogenase large chain TERM 206 451561 - 451579 + g 71 -3 -4.63486 | overlap 451561 451560 GATGCCCATCAGCTC GCCGCG CGCTCGC CGCTGC TTTTGTTCGGCGCGT JTY_0382 453425 - 452946 - | putative carbon monoxide dehydrogenase small chain JTY_0383 454300 - 453440 - | putative carbon monoxide dehydrogenase medium chain JTY_0384 455518 - 454376 - | hypothetical protein JTY_0385 455567 - 456532 + | putative transcriptional regulatory protein JTY_0386 456783 - 457004 + | hypothetical glycine rich protein secE2 457123 - 457338 + | putative protein transport protein TERM 207 457364 - 457391 + T 74 -4.8 -4.62984 | opp_overlap 457357 457365, overlap 457359 457357 CGAGCAGACGCAAAA TCGCACGGTTTG CGGT TGATTCGTGCGA TTTTGTGTCTGCTCG JTY_0388 457965 - 457414 - | putative RNA methyltransferase JTY_0389 458969 - 458061 - | hypothetical protein TERM 208 458508 - 458490 - G 77 -13.1 -3.60296 | CATCCCCACCGGAAA CGCGGCC GGATA GGCCGCG GCAGTACCCGGGATC pyrE 459526 - 458987 - | orotate phosphoribosyltransferase JTY_0391 460461 - 459607 - | putative secreted protein TERM 209 460543 - 460584 + r 100 -21.7 -2.82516 | gap 1, opp_overlap 460543 TCCACGCCGAGCAGA CGCGGAATCGCACTGCGCGG ACC TCACGC-GTGCGATTCCGCG TCTGCTCGTCAGACA TERM 210 460584 - 460543 - R 100 -23.2 -2.79183 | gap 1, opp_overlap 460543 TCCACGCCGAGCAGA CGCGGAATCGCACTGCGCG GACCT CACGC-GTGCGATTCCGCG TCTGCTCGTCAGACA clpB 463148 - 460602 - | putative endopeptidase ATP binding protein chain b TERM 211 462759 - 462732 - G 86 -17.8 -3.15544 | gap 1 GCGCACCTTGACGAA CGCCTC-CCGCAG CGC CTGCGGCGAGGCG CCGTGGCCGGTCAAC TERM 212 463010 - 463023 + g 70 -5.9 -4.18018 | CCTCCAGTAGCGGTG CGGCG ATAC CGTCG TTTTGGGTCAGCAGC JTY_0393 463281 - 464453 + | putative monooxygenase JTY_0394 464557 - 467814 + | putative transcriptional regulatory protein PPE9 469149 - 467818 - | PPE family protein TERM 213 468794 - 468777 - G 70 -4.1 -4.56597 | opp_overlap 468770, overlap 468780 TGTTCTGGCCAAAAA CATTGGT CTTG ACCAGTG ACAGCATTGTGCGGC TERM 214 470584 - 470546 - g 75 -15.9 -2.79831 | opp_overlap 470580 470583, overlap 470535 TCAACCCGGACCACA CGGCAGGCCGGGCAGCG GTCGG CGCCGCACCACCTGCCG ATGCGCTGACCGGTG purT 469483 - 470742 + | phosphoribosylglycinamide formyltransferase 2 JTY_0397 470739 - 471161 + | hypothetical protein metZ 471158 - 472378 + | O-succinylhomoserine sulfhydrylase ndhA 473787 - 472375 - | putative membrane NADH dehydrogenase TERM 215 473838 - 473856 + H 80 -5.2 -4.8543 | opp_overlap 473830 CACAGTACGACTCCC GTCATGCC AAC GGCGTAAC TTTTTGTGGGCCTTG TERM 216 474502 - 474454 - g 75 -16 -2.78596 | gap 2, overlap 474456 GATCCGCGCAGCACA GATCAGCGCC-G-CGCCGACGCGC TGG GCGCGTTGGCGGCCGGGGCGGATC GGCTGGCCTGCCGCT JTY_0400 473929 - 475254 + | conserved 13E12 repeat family protein TERM 217 475231 - 475247 + T 73 -3.5 -4.7373 | overlap 475233 CCACCACCCGATCCC GACGACG ACC CGCCGCC TTTTTGATGAAGTGA JTY_0401 475989 - 475270 - | putative secreted protein JTY_0402 476088 - 476492 + | hypothetical protein JTY_0403 476498 - 476890 + | hypothetical protein JTY_0404 476964 - 477332 + | conserved 13E12 repeat family protein JTY_0405 478468 - 477827 - | putative secreted protein lpqK 479704 - 478475 - | putative lipoprotein fadE7 480901 - 479714 - | putative acyl-CoA dehydrogenase TERM 218 480515 - 480530 + g 72 -5.4 -4.30576 | gap 1, opp_overlap 480488, overlap 480515 480516 ACCGGTGGCCATGCC G-GGCAG CCA CTGCCGC TTTTGCTCGTCGGAG TERM 219 480575 - 480551 - G 70 -10 -3.64703 | CTCGTCGGAGCCAAA GCTCGCGATG GCGAA CATCGCCAGC GAACCCTGTACCGAC JTY_0408 480937 - 481308 + | putative transmembrane protein mmpL1b 482606 - 481503 - | putative transmembrane transport protein mmpL1a 484378 - 482603 - | putative transmembrane transport protein TERM 220 483273 - 483286 + g 73 -9.5 -4.00868 | opp_overlap 483238, overlap 483275 ACGACCGTGCCGATC CGGCG CCAA CGCCG TTTCGTTGTCGCTCG mmpS1 484803 - 484375 - | hypothetical protein TERM 221 484980 - 485010 + H 76 -15.5 -2.52464 | AGTCATCGATCCAGA GCCGCTTCGACCA GCCTG TGGTCGAAGCGGA TCAGTTGAACCGGAG fadD30 485124 - 486881 + | acyl-CoA synthetase pks6a 486878 - 488260 + | putative membrane bound polyketide synthase TERM 222 488756 - 488773 + GT 77 -4 -4.78848 | CTGCGGTGTTGGCAA GCCGGC GGGCAA GACGGC TTTTGTGTTTGCCGG TERM 223 490562 - 490573 + GT 81 -7.2 -4.50976 | overlap 490560 TATTGATGTGGTAGG CGGC AGCT GCCG TTTTGTGCTGTCGGG JTY_0415 491853 - 491035 - | beta lactamase like protein pks6b 488247 - 491087 + | putative membrane bound polyketide synthase fgd1 491931 - 492941 + | putative F420-dependent glucose-6-phosphate dehydrogenase pta 492934 - 495006 + | phosphate acetyltransferase TERM 224 495511 - 495552 + G 73 -10.8 -3.67141 | gap 1, opp_overlap 495508 495506, overlap 495511 TTCACACCAATACGT CAG-CGAGCGGGCCGCC GCCTTCCTG GGCCGCCCGCTCGACGG TTTGAATCAGATTGT ackA 494999 - 496156 + | acetate kinase pknG 498462 - 496210 - | serine/threonine-protein kinase glnH 499448 - 498462 - | putative glutamine-binding lipoprotein JTY_0421 500767 - 499448 - | hypothetical protein mutT3 500861 - 501514 + | putative mutator protein thiE 502166 - 501498 - | thiamine-phosphate pyrophosphorylase thiO 502296 - 503318 + | putative thiamine biosynthesis oxidoreductase thiS 503315 - 503521 + | sulfur carrier protein TERM 225 504161 - 504203 + G 86 -18.3 -2.88579 | CCGGGCCGCCGACCC GCCGGCGATGGCCGCGGCG ATGGC CGCCGCGGTGACCGCCGGA TATCTGGCGCGTTGC thiG 503514 - 504272 + | thiamin synthase TERM 226 504999 - 504986 - g 70 -2.3 -4.62471 | overlap 504987 504988 TTCAAGGCCGAAAAA GGGGT GGTG ACCCT CGGCGGCAACACCGT TERM 227 505216 - 505195 - g 71 -12.3 -3.29325 | gap 1, opp_overlap 505196, overlap 505193 TGCCCAGAAGGAAGA CGCAGCCGCG CAG CGCGG-TGCG GTGGCGCTGATCATT lpqL 504644 - 506146 + | putative lipoprotein aminopeptidase lpqM 506234 - 507730 + | putative lipoprotein peptidase JTY_0429 508119 - 507709 - | putative transmembrane protein TERM 228 508151 - 508140 - R 72 -7.2 -4.15044 | overlap 508122 508141 GGCTTTGCCAACAAA GGCC GGGT GGCC ACGCCCAGGCAAGTT JTY_0430 508909 - 508280 - | hypothetical protein thiD 509703 - 508906 - | phosphomethylpyrimidine kinase thiC 511373 - 509730 - | thiamine biosynthesis protein TERM 229 509925 - 509947 + g 71 -9 -3.79519 | GCAGAAGTGCGCGGT CTTGGCCGGC TCC GCCGGCAGGG TTTCGTCGTGGAATT TERM 230 510852 - 510888 + g 100 -20.9 -3.31792 | GGTGGACAGGTCCAT GATGGTGTCGGCCCCCC AGC GGGTGGCCCACACCATC TTGTCGACCTCCTCG JTY_0433 511800 - 511525 - | hypothetical protein ctpH 516469 - 511850 - | putative metal cation transporting P-type ATPase TERM 231 512455 - 512496 + g 72 -13.7 -3.01712 | gap 1 CCGGGTCGCTTGGCT TGCTGACCGCGAGCGCCGCC GCG GGCAGTGCGT-CGGTCAGCA TGTTCACCAGCAGCA TERM 232 513992 - 514021 + g 70 -10.1 -3.72576 | gap 1, overlap 513995 GCAGCGACGTTCGAT CAGGTCGACACCCG GCG TGGGT-TCGACTTG TTTGGTCACCGACAG TERM 233 513995 - 514018 + g 70 -8.2 -4.00042 | gap 1, overlap 513992 GCGACGTTCGATCAG GTCGACACCCG GCG TGGGT-TCGAC TTGTTTGGTCACCGA TERM 234 515937 - 515891 - G 73 -10.6 -3.62572 | overlap 515892 GATGACGAGCGGAAA TCGGGGCCAGCGCAGCGCCCGG CCG CCGAGCGCTAAGCCCAGCCCGG CCGCGGTGGCGGCTA JTY_0435 516964 - 516521 - | putative transmembrane protein xthA 518040 - 517165 - | putative exodeoxyribonuclease III protein TERM 235 517364 - 517350 - G 74 -12.8 -3.58343 | CCCAGTAGGTGTAAA CCCCGG GTC CCGGGG TGAAAGGCCGTACTA JTY_0437 518951 - 518043 - | hypothetical protein def 519544 - 518951 - | peptide deformylase JTY_0439 519881 - 520189 + | hypothetical protein JTY_0440 520221 - 520715 + | putative tuberculin related peptide sodC 520748 - 521470 + | putative periplasmic Cu-Zn-superoxide dismutase TERM 236 521630 - 521589 - g 70 -11.6 -3.40371 | overlap 521593 GATCTGAGCAATGAA GCCACCGC-GGTTATCGCCG AAAT CGGCGAAAACCCGCGG-GTC CACAAGGAATTGCTG TERM 237 521627 - 521593 - g 77 -16.5 -2.61216 | gap 1, overlap 521589 TGAGCAATGAAGCCA CCGC-GGTTATCGCCG AAAT CGGCGAAAACCCGCGG GTCCACAAGGAATTG JTY_0442 521472 - 522602 + | hypothetical protein JTY_0443 522662 - 523315 + | hypothetical protein JTY_0444 525681 - 523495 - | putative ATPase pssA 526538 - 525678 - | putative CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 238 526117 - 526100 - G 80 -14.1 -3.68351 | opp_overlap 526100 526104 GGCCGATCATGGAAA CCGCGCC CGCC GGCGCGG GCATTCCGACGAAGA psd 527230 - 526535 - | phosphatidylserine decarboxylase moeA2 528508 - 527291 - | putative molybdopterin biosynthesis protein TERM 239 528411 - 528376 - G 78 -10.4 -4.08767 | gap 1, overlap 528377 CGGAGTTGTCGAAAA CCGGCAGCGACAGCGGT GCG ACCAC-GTCGCCGCCCA GGACCAGACCTTGAG JTY_0448 529462 - 528527 - | short chain dehydrogenase TERM 240 529895 - 529881 - g 91 -11.4 -4.17048 | CGTCCTGGAAAAGAA GTGGGG TGC CCCCAC GATCACCAACGATGG TERM 241 530788 - 530738 - g 76 -15.5 -2.87136 | gap 2 TCACCAAGGACGAGA CCAC-CAT-CGTCGAGGGCGCCGGT GAC ACCGACGCCATCGCCGGACGAGTGG CCCAGATCCGCCAGG groEL 529756 - 531378 + | chaperonin TERM 242 531399 - 531433 + T 100 -25.1 -2.71731 | opp_overlap 531392 531391, overlap 531401 GCGAGAAGTCGCAGC GAGGAGCCCGGTCCC TTTGT GGGGCCGGGCTCCTC TGGTTGGGAGCTACG TERM 243 531401 - 531431 + T 100 -21.9 -2.90392 | opp_overlap 531392 531391, overlap 531399 GAGAAGTCGCAGCGA GGAGCCCGGTCCC TTTGT GGGGCCGGGCTCC TCTGGTTGGGAGCTA JTY_0450 531872 - 531444 - | hypothetical protein PPE10 533338 - 531899 - | PPE family protein TERM 244 533307 - 533281 - G 72 -13 -3.14132 | CGGTGGCCGCAGCAA TTAGCGGTCCCG ACC CGGGACCGGCAA ACATCAGTGCCGAAT JTY_0452 533544 - 534059 + | hypothetical protein JTY_0453 534937 - 534239 - | hypothetical protein sigK 535544 - 534981 - | RNA polymerase sigma factor JTY_0455 536363 - 535593 - | putative transmembrane protein ufaA1 537655 - 536372 - | putative cyclopropane-fatty-acyl-phospholipid synthase TERM 245 536920 - 536894 - G 72 -11.5 -3.53224 | gap 1, opp_overlap 536893 536902, overlap 536895 TACCCGGTGGCCAAA GC-CGGCCGCGG CGAC CCGCTGCCGAGC CAGCCGTTGCTGCTC JTY_0457 538317 - 537652 - | hypothetical protein JTY_0458 539696 - 538377 - | hypothetical protein mmpL4 542639 - 539736 - | putative transmembrane transport protein TERM 246 540955 - 540937 - G 79 -8.8 -4.40993 | opp_overlap 540936 540939, overlap 540939 CAGAAATCATCAAAA TCCGCGAC GTG GTCGCGTA ATTCTTCGGTGATCT TERM 247 542025 - 542007 - G 79 -7.4 -4.51763 | opp_overlap 542023 CAACAACATAATAAA GATCACGG CGA CCGTAACC ATGGTGATCCTGGCC mmpS4 543058 - 542636 - | hypothetical protein TERM 248 543401 - 543349 - g 85 -10.5 -4.2828 | gap 1, overlap 543352 CCGCACCGAGGAAAA CAAGCGCCAACGTGCG-GCGGC GCTGGTGGAA GCCGCGCGGTCGCTGGCGCTGG AGACGGGCGTGGCAT TERM 249 543398 - 543352 - g 89 -10.8 -4.26327 | gap 1, overlap 543349 CACCGAGGAAAACAA GCGCCAACGTGCG-GCGGC GCTGGTGGAA GCCGCGCGGTCGCTGGCGC TGGAGACGGGCGTGG JTY_0461 543290 - 544000 + | putative transcriptional regulatory protein TERM 250 544595 - 544632 + G 75 -12 -3.73775 | TGCGCCGCGGCGGCT GCC-CGGCTGGAGGCGGT GACC GCCGCCTAC-GCCGCGGC TTTGGTGGCCATGCC PPE11 544322 - 545878 + | PPE family protein JTY_0463 545983 - 546333 + | hypothetical protein JTY_0464 546969 - 546523 - | hypothetical protein TERM 251 546943 - 546931 - G 75 -9.1 -4.1021 | GCCGAGAACCAGAAA TGCCG CGC CGGCA CGCAGGATGGAACTC echA2 547951 - 547037 - | enoyl-CoA hydratase JTY_0466 548505 - 548224 - | hypothetical protein JTY_0467 550764 - 548734 - | putative peptidase JTY_0468 550823 - 552346 + | putative aldehyde dehydrogenase TERM 252 552753 - 552702 - g 81 -10.6 -4.11692 | overlap 552703 CAGCGACGCCGAAAA GGCGATGCGGGAGGCTGCGCCGGT GATC ACCGGCGCAGCCTACGAGTGCGGC GAACGACCGTTAGTG JTY_0469 552346 - 552837 + | hypothetical protein JTY_0470 552897 - 553136 + | conserved hydrophobic protein JTY_0471 553174 - 553698 + | putative transmembrane protein lpd 553762 - 555156 + | dihydrolipoamide dehydrogenase JTY_0473 555164 - 555457 + | hypothetical protein JTY_0474 556033 - 555461 - | hypothetical protein JTY_0475 557454 - 556030 - | putative transcriptional regulatory protein JTY_0476 557606 - 558400 + | hypothetical protein TERM 253 558421 - 558440 + F 70 -7.8 -4.08144 | overlap 558402 TCCGCAGGACGTCGA TCCGTGGG TTTA CCTGCGGA TTTGTCATTACTGGC TERM 254 558465 - 558478 + F 74 -5.3 -4.58283 | ACTGGCGGGTAGCTT CTGAA ACGG TTCAG TTTTTGGGCGACTTC TERM 255 559671 - 559640 - g 73 -3.6 -4.66833 | overlap 559643 559644 GTTCAACTGGAAAAA GCACCTCGACGACG CCAC CATCGCCAAGTTCC AGAAGGAGCTGGCAG icl 558675 - 559961 + | isocitrate lyase TERM 256 560016 - 559975 - f 100 -21.9 -2.78463 | gap 1, opp_overlap 559975 559982 560013, overlap 559982 AGTCTGCCGAGCAGA CGCAAAAGCACC-CTTTTGC GGC GCAAAAGTGGCGCTTTTGCG TCTGCTCGCGCATTT TERM 257 559975 - 560016 + F 90 -19.7 -2.79312 | gap 1, opp_overlap 559975 559982, overlap 559982 560013 AGTCTGCCGAGCAGA CGCAAAAGCACC-CTTTTGC GGC GCAAAAGTGGCGCTTTTGCG TCTGCTCGCGCATTT TERM 258 560009 - 559982 - f 89 -11.4 -4.24948 | gap 1, opp_overlap 559975 559982, overlap 559975 CGAGCAGACGCAAAA GCACC-CTTTTGC GGC GCAAAAGTGGCGC TTTTGCGTCTGCTCG TERM 259 559982 - 560009 + F 83 -9.2 -4.24948 | gap 1, opp_overlap 559982 559975, overlap 559975 CGAGCAGACGCAAAA GCACC-CTTTTGC GGC GCAAAAGTGGCGC TTTTGCGTCTGCTCG fadB2 560043 - 560903 + | 3-hydroxybutyryl-CoA dehydrogenase umaA1 561036 - 561896 + | putative mycolic acid synthase pcaA 562859 - 561996 - | mycolic acid synthase JTY_0481 563442 - 563002 - | hypothetical protein JTY_0482 563861 - 563373 - | hypothetical protein JTY_0483 564575 - 563871 - | putative transcriptional regulatory protein TERM 260 564356 - 564369 + g 74 -2.3 -4.82901 | ACCGCATCATCACGG CGGTC GTCA GGTCG TTTTTGTCGACGAAG JTY_0484 564712 - 566082 + | putative transmembrane protein TERM 261 566114 - 566097 - f 72 -7.7 -4.15222 | overlap 566098 ACGGGTGCTAACAAA CGCTTGC AATA GCAAGCA CTTGGACGTACTCTG JTY_0485 566169 - 566591 + | putative transcriptional regulatory protein hbhA 566945 - 567544 + | heparin binding hemagglutinin TERM 262 567602 - 567560 - f 100 -28.6 -2.70932 | opp_overlap 567561 TCGGGCTCCGAATCA CCATCGACTCCGAGTCGCCC ACG GGGCGACTCGGAGTCGACGT GTTGGATGCAAACCG TERM 263 567561 - 567601 + F 100 -29.9 -3.08679 | opp_overlap 567560 CGGGCTCCGAATCAC CATCGACTCCGAGTCGCCC ACG GGGCGACTCGGAGTCGACG TGTTGGATGCAAACC JTY_0487 567656 - 567919 + | putative transmembrane protein JTY_0488 567924 - 568370 + | putative secreted protein deoC 568370 - 569044 + | deoxyribose-phosphate aldolase JTY_0490 570115 - 569069 - | hypothetical protein TERM 264 569217 - 569238 + g 73 -6.6 -4.41348 | overlap 569213 569218 AGGCTGGAGGTGAAC TCGTTCAG CGTCGA CTGAACGG TTTCTTTCGGCAGCG JTY_0491 571047 - 570112 - | hypothetical protein TERM 265 571072 - 571019 - G 73 -16 -2.52676 | gap 3 GAGCCGGGCAATCCA GCTTGCGCCCGGCGAC-GAGCGCGCCG CAC CGGCGCGCGCAGGAGCCGG--GCAAGC TGGCACCTCAGACGT JTY_0492 571604 - 571080 - | hypothetical protein murB 571631 - 572740 + | UDP-N-acetylenolpyruvoylglucosamine reductase lprQ 572802 - 574157 + | putative lipoprotein JTY_0495 574893 - 574138 - | short-chain type oxidoreductase TERM 266 574401 - 574432 + g 72 -15.1 -2.71144 | TCCCCAGCAGTTCGC CGCGCAGCGTGCG ATGCAG CGCGCCCTGCGCG TGCTTGGCAGCGGTG JTY_0496 575076 - 576392 + | putative transcriptional regulatory protein TERM 267 577694 - 577720 + G 73 -12.3 -3.40403 | gap 2 GGACGGGTGATGAGC CG-GGCGGCG-GC ACG GCACGCCGCCACG TTCTCGTGGGAGAAC JTY_0497 576440 - 577882 + | mannosyltransferase JTY_0498 577879 - 578430 + | hypothetical protein JTY_0499 578814 - 579419 + | putative integral membrane protein TERM 268 580032 - 580052 + G 77 -5.3 -4.6856 | CCGCTCACCGAATGT CTGGCTGAC GTG GTCGCCCGG TTTTTGCCATATTTC gpm1 579576 - 580325 + | putative phosphoglycerate mutase 1 TERM 269 581117 - 581137 + G 72 -13.3 -3.16191 | ATTGAGGCCAACCGG CTCGGTGAC ATG GTCGCCGAG TTGATCGAGCTATCC senX3 580499 - 581731 + | putative two component sensor histidine kinase regX3 581959 - 582642 + | two component sensory transduction protein JTY_0503 584528 - 582639 - | putative oxidoreductase GMC-type JTY_0504 584854 - 584525 - | hypothetical protein JTY_0505 585840 - 584851 - | hypothetical protein JTY_0506 585845 - 586573 + | putative transcriptional regulatory protein JTY_0507 587464 - 586574 - | hypothetical protein TERM 270 587727 - 587692 - g 70 -13.3 -3.04501 | overlap 587682 ACGAATTCGCCAAGA TTGCCATCAGCTCGG GCTGTG CCGAGCTGATGGCCT TCGCCACGTCGGCGG JTY_0508 587544 - 588530 + | hypothetical protein JTY_0509 588527 - 589459 + | putative transmembrane protein JTY_0510 589475 - 590317 + | hypothetical protein TERM 271 590384 - 590405 + G 81 -8.7 -4.56597 | CCGCTTGACTCCGAT CCCGGCA ATCCGGCG TGCCGGG TTTTTGAAGGCGAGC JTY_0511 590333 - 591208 + | hypothetical protein TERM 272 591374 - 591331 - g 73 -12.5 -3.38046 | gap 2, opp_overlap 591356, overlap 591329 591370 CCGGCAGGTCAAAGA CCTGGTAG-TGGC-CGAGCGG ATGC CCGATCGCGCCAACTACCTGG CGCAGACCTATTCGG proC 591233 - 592120 + | pyrroline-5-carboxylate reductase TERM 273 592288 - 592298 + G 70 -2.4 -4.63218 | opp_overlap 592275 AACGGGCCATCGGCG CGGG ATA CCGG TTTTGTTGAGGGCCA JTY_0513 592261 - 592497 + | hypothetical protein TERM 274 592693 - 592672 - f 81 -4.3 -5.07486 | overlap 592676 CATGTCCAAGAAAAA GCATCGCAA GCTG CTGCGTCGC ACCCGGGTGCAGCGC galE2 592804 - 593934 + | putative UDP-glucose 4-epimerase JTY_0515 593941 - 595017 + | hypothetical protein cmaA2 595929 - 595021 - | cyclopropane-fatty-acyl-phospholipid synthase 2 TERM 275 595342 - 595356 + g 72 -11.4 -3.50335 | overlap 595338 595334 CATCGGAGACGTCAA GCCCAG CTC CTGGGC TTCCTCTTTGTCCGG JTY_0517 596452 - 595952 - | hypothetical protein serB1 597735 - 596614 - | putative phosphoserine phosphatase mmpS2 597909 - 598352 + | hypothetical protein TERM 276 600332 - 600350 + G 100 -11.6 -4.56597 | opp_overlap 600331 600325 AGGAATAACAAGGAC CCCGGCGC GAT GGGCCGGG TTTTTGACGCCGCCC TERM 277 600643 - 600670 + G 73 -11.3 -3.72743 | opp_overlap 600637 600640, overlap 600640 CGCCAGATACGATCT GCTGATCGCCG GAGTGG CGGCGATAAGC TTGATTTTGATCATC mmpL2 598349 - 601255 + | putative transmembrane transport protein JTY_0521 601248 - 601541 + | hypothetical protein hemA 601591 - 602997 + | putative glutamyl-tRNA reductase hemC 603007 - 603936 + | porphobilinogen deaminase TERM 278 605246 - 605259 + G 80 -9.5 -4.25104 | CGACAGCGTTTTCGA CCCGG TGAA CCGGG TTTTGCTGCCGCGCG hemD 603969 - 605666 + | putative uroporphyrin-III C-methyltransferase hemB 605752 - 606741 + | delta-aminolevulinic acid dehydratase JTY_0526 606754 - 607302 + | putative transmembrane protein JTY_0527 607299 - 607598 + | putative transmembrane protein JTY_0528 607701 - 609212 + | conserved 13E12 repeat family protein JTY_0529 609685 - 609209 - | hypothetical protein TERM 279 610849 - 610867 + G 71 -12.4 -3.25823 | overlap 610863 CAGCCTGGCGATTGG CGTCGGCA GCC TGCCGGCG TTGCTGTCGACGCGG TERM 280 610871 - 610889 + G 70 -3.8 -4.56597 | overlap 610863 610874 AGCCTGCCGGCGTTG CTGTCGAC GCG GTTGATGG TTTTTGGCGGGCAGA JTY_0530 609896 - 611206 + | putative membrane acyltransferase JTY_0531 611338 - 612033 + | hypothetical protein JTY_0532 613224 - 612322 - | hypothetical protein JTY_0533 613405 - 613755 + | putative methyltransferase/methylase JTY_0534 613748 - 614053 + | putative methyltransferase/methylase gabP 614188 - 615492 + | putative GabA permease JTY_0536 615871 - 615476 - | hypothetical protein hemL 615985 - 617373 + | putative glutamate-1-semialdehyde aminotransferase JTY_0538 617373 - 617981 + | hypothetical protein JTY_0539 617996 - 618646 + | putative thioredoxin protein ccdA 618643 - 619422 + | putative cytochrome c-type biogenesis protein JTY_0541 619455 - 621044 + | putative transmembrane protein ccsA 621041 - 622015 + | putative cytochrome c-type biogenesis protein JTY_0543 622057 - 623274 + | hypothetical protein JTY_0544 623479 - 623796 + | hypothetical protein TERM 281 624055 - 624104 + G 77 -7.7 -4.30576 | gap 1, overlap 624021 624061 624062 GGGCCCCGACGATGG CGCTGTTGGCCGCCGGTGCCGATG AGG TGTCGGCGGCGGTGGC-GGCCGTG TTTTCCTCCTACGCC TERM 282 624061 - 624102 + G 80 -14.3 -3.7574 | overlap 624055 624062 CGACGATGGCGCTGT TGGCCGCCGGTGCCGATGA GGTG TCGGCGGCGGTGGCGGCCG TGTTTTCCTCCTACG TERM 283 624062 - 624101 + G 76 -15.6 -2.84962 | overlap 624061 624055 GACGATGGCGCTGTT GGCCGCCGGTGCCGATGA GGTG TCGGCGGCGGTGGCGGCC GTGTTTTCCTCCTAC TERM 284 625107 - 625158 + G 79 -13.6 -3.74693 | gap 1 GGCGGGTGGTTGTAC GGC-GATGGCGGCGCCGGCGGCGTC GGC GGTGTCGGCGGTGCTGTCTTCAGCC TTTCCTCCGGTGACG TERM 285 625566 - 625592 + G 81 -15 -3.60792 | overlap 625567 GGCGGTGACGGCGGG GCCGGCGGGGCC GGC GGGCCCGCCGGG TTTGGCGCTTCCCCC TERM 286 625567 - 625591 + G 87 -18.5 -2.76261 | overlap 625566 GCGGTGACGGCGGGG CCGGCGGGGCC GGC GGGCCCGCCGG GTTTGGCGCTTCCCC PE_PGRS6a 623943 - 625688 + | PE-PGRS family protein fabH 626724 - 625717 - | 3-oxoacyl-(acyl-carrier-protein) synthase III TERM 287 626562 - 626540 - G 79 -16.3 -3.05816 | opp_overlap 626540 626538 TCAGTCGCCATGGAA GCCGCCGAC TCGTC GTCGGCGGC GAATCGGCGGGTCTT TERM 288 626540 - 626573 + g 76 -14.5 -3.14527 | opp_overlap 626540, overlap 626538 TCAGTCGCCATGGAA GCCGCCGACTCGTCG TCGG CGGCGAATCGGCGGG TCTTGATGCCGGTTC menA 627684 - 626806 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase pnp 627701 - 628495 + | 5'-methylthioadenosine phosphorylase TERM 289 628631 - 628614 - g 74 -12.7 -3.55444 | opp_overlap 628628 CGCGCACGGGCCAAA CCCGGTG CTGC CACCGGG CTGCCAGCGGGTCGA galE3 628492 - 629532 + | putative UDP-glucose 4-epimerase JTY_0551 630975 - 629542 - | putative integral membrane protein TERM 290 630907 - 630895 - G 71 -3.3 -4.62069 | overlap 630897 GTTCCATGGGAAAAA CAGCG CAC CGATG AGCAGGGCACCAGCG TERM 291 632715 - 632677 - g 84 -17.4 -3.17212 | TGACCACGCCACCAA CGACCGTCGCCCCGACGA CCG TCGCCCCGACGACGGTCG CTCCGACCACCGTCG TERM 292 632861 - 632912 + G 80 -14.2 -3.62522 | gap 1, opp_overlap 632831 632839 CCCGCAGACGGTGGC GCCGGCTCCGCAGCCGCCG-TCCGG TGG CCGCAACGGCAGCGGCGGGGGCGAC TTATTCGGCGGGTTC JTY_0552 631284 - 632930 + | hypothetical protein JTY_0553 632987 - 633619 + | putative dolichyl-phosphate sugar synthase TERM 293 633697 - 633655 - g 77 -13.3 -3.53012 | gap 1, overlap 633656 633680 CTGGTGGTCGCTAAA GCGCCGGAGCCGGGCCGGGT CAAG ACCCGGCT-GGCCGCGGCGA TTGGCGATAAGGTCG TERM 294 633696 - 633656 - g 80 -16.8 -2.71712 | gap 1, overlap 633655 633680 TGGTGGTCGCTAAAG CGCCGGAGCCGGGCCGGGT CAAG ACCCGGCT-GGCCGCGGCG ATTGGCGATAAGGTC JTY_0554 633616 - 634278 + | hypothetical protein JTY_0555 635648 - 634299 - | putative integral membrane protein TERM 295 635181 - 635148 - G 75 -9.5 -4.06678 | gap 1 ATCCAGCCAGACAAA CGTCAGCAGCGCACCC GGC GGGTGC-CCGGAGACG TGAGTCACCCAGGAA TERM 296 635461 - 635432 - G 78 -14.9 -3.32844 | overlap 635450 635451 GCCCCCACGCCACAA CGGCCACTGCGGT AAGA ACCGCCGGGGCCG TGCCCCAGCCAACAT menE 636748 - 635660 - | putative o-succinylbenzoic acid--CoA ligase TERM 297 635931 - 635893 - G 79 -7.3 -4.66833 | gap 1 CGGCAAGTCCAAAAA CCGCGC-AGTCACGCACC GCAG GGTGGGTGCCCAGTGCGG CCTCCACTGGCTGCG JTY_0557 637119 - 636817 - | hypothetical protein JTY_0558 637457 - 637179 - | putative transmembrane protein TERM 298 637359 - 637307 - G 85 -17.6 -2.7386 | overlap 637286 637274 637298 AACTGACGGCAACCA GCAGC-GGGCGCCGGCGCGCGGTGGC GTC GGCACCGT-CGCCGGCGGCCTGCAGC CGCACGCCCACCGCG pitA 638707 - 637454 - | putative low-affinity inorganic phosphate transporter integral membrane protein TERM 299 638558 - 638537 - G 74 -2.2 -4.82901 | GGCGGTGGACAAAAA CGCACCGA TCAGGT TCAGCACG GCAGAAAGTGCTACC JTY_0560 639213 - 638827 - | hypothetical protein JTY_0561 640160 - 639276 - | putative oxidoreductase menB 641200 - 640256 - | naphthoate synthase JTY_0564 641884 - 641576 - | hypothetical protein JTY_0565 642147 - 641881 - | hypothetical protein TERM 300 642181 - 642148 - R 77 -13.1 -3.61398 | GCGCCGGCTCAACAA GGCCTTCGGCGGG TTCTTTCG CCCGCCGCAGACC GCGAAACCCGCTGTG fadD8 644054 - 642339 - | acyl-CoA synthetase TERM 301 643266 - 643254 - G 89 -10.5 -4.56597 | overlap 643256 CGTCGGCGTGAAAAA CGCCG CGC CGGCG TGCGACAGCGGGGTG JTY_0567 644132 - 645736 + | hypothetical protein TERM 302 646490 - 646539 + G 78 -14.2 -3.53224 | gap 2 GCCTGACCGCCGCCG CGGCCCTGCCGGAGCTCGACCACG CGTG CG-GGCTGGGCACCGGC-GGGCTG TTTGAAGAGGACGTG menC 645733 - 646713 + | O-succinylbenzoate synthase bpoC 646710 - 647498 + | putative peroxidase menD 647541 - 649205 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxyglutarate decarboxylase JTY_0571 649202 - 649717 + | putative transmembrane protein TERM 303 649942 - 649980 + G 70 -13.1 -3.02144 | ACCGCGCCGAGCGAC TTCACGACGGTGTCCGG GTGCA CCGGGTGCCGTCGCGGA TGTTCCCAAAGGTGA TERM 304 650334 - 650364 + G 77 -15.4 -3.01791 | CGCGGGGTGGACGTG CAACGTTTCGCGCC GTC GGCGCGAAACGAGG TGTTGAGGCGACGGT pimB 649779 - 650915 + | mannosyltransferase ubiE 650932 - 651636 + | ubiquinone/menaquinone biosynthesis methyltransferase JTY_0574 651988 - 651650 - | putative secreted protein JTY_0575 652747 - 652022 - | putative benzoquinone methyltransferase JTY_0576 653998 - 652772 - | putative oxidoreductase grcC1 654014 - 655021 + | putative polyprenyl-diphosphate synthase htpX 655122 - 655982 + | heat shock protein gpdA1 657192 - 656167 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase JTY_0580 658713 - 657253 - | putative monooxygenase JTY_0581 659282 - 658791 - | nucleotide-binding protein JTY_0582 659564 - 660583 + | putative methyltransferase/methylase TERM 305 660606 - 660657 + F 74 -12.2 -3.53343 | opp_overlap 660596 660614, overlap 660607 TGACATGGTGGGTGG CCGACCAACGTGAACTGAGGACGG CAAA TCGGCCTCAGTTCACGCTCGGCGC TTTGAGCAACAAATT TERM 306 660607 - 660656 + F 78 -15.7 -2.71791 | opp_overlap 660596 660614, overlap 660606 GACATGGTGGGTGGC CGACCAACGTGAACTGAGGACGG CAAA TCGGCCTCAGTTCACGCTCGGCG CTTTGAGCAACAAAT TERM 307 660649 - 660614 - f 91 -17.7 -3.14132 | opp_overlap 660607 660606 TGGGTGGCCGACCAA CGTGAACTGAGGACG GCAAAT CGGCCTCAGTTCACG CTCGGCGCTTTGAGC TERM 308 660766 - 660781 + G 79 -3.2 -5.0133 | gap 1, overlap 660767 AGGCCGTGTTGATGT TGC-GCC ATG GGCTGCG TTTTTTGACGGCCTG cyp135B1 660693 - 662111 + | putative cytochrome p450 135b1 TERM 309 662146 - 662158 + F 76 -9.1 -4.07568 | GGGGTCGCCCAGCGG GTCCC GAG GGGAC TTTTGGCCACCGGCG JTY_0584 662246 - 662512 + | hypothetical protein TERM 310 664220 - 664235 + G 76 -6 -4.46212 | overlap 664222 GTGCTTCGACCGACT GGCCCG CGAT CGGGGC TTTTATCGTGACGAG TERM 311 664682 - 664641 - g 100 -22.7 -2.78596 | gap 1, opp_overlap 664641 664648, overlap 664648 CATGGCGCGAGCAGA CGCAGAATCGCA-CAAAATC AGC GATTTTGATGCGATTCTGCG TCTGCTCGCGCAGGG TERM 312 664641 - 664682 + G 100 -22.7 -2.78384 | gap 1, opp_overlap 664641 664648, overlap 664648 CATGGCGCGAGCAGA CGCAGAATCGCA-CAAAATC AGC GATTTTGATGCGATTCTGCG TCTGCTCGCGCAGGG nrdZ 662538 - 664670 + | putative ribonucleoside-diphosphate reductase large subunit TERM 313 664648 - 664675 + T 71 -10.8 -3.40299 | gap 1, opp_overlap 664641 664648, overlap 664641 CGAGCAGACGCAGAA TCGCA-CAAAATC AGC GATTTTGATGCGA TTCTGCGTCTGCTCG TERM 314 664675 - 664648 - T 71 -10.8 -3.40299 | gap 1, opp_overlap 664648 664641, overlap 664641 CGAGCAGACGCAGAA TCGCA-CAAAATC AGC GATTTTGATGCGA TTCTGCGTCTGCTCG JTY_0586 666060 - 664729 - | hypothetical protein TERM 315 665714 - 665742 + g 70 -11.8 -3.36878 | gap 2 AACGGGATGCGGTCA CGCCCGCGGCGGAA GCG TTCCG-CGCGG-CG TTGTAGCTCGATCAG JTY_0587 666625 - 666284 - | hypothetical protein JTY_0588 668484 - 667093 - | nicotinate phosphoribosyltransferase TERM 316 668031 - 668062 + g 72 -13.6 -3.14132 | gap 1, opp_overlap 668022 668019, overlap 668057 AATCCACCACCGGTC GTCCGCGCGCGGCGG CGA CCACC-CGCGCGGCC TTGCTCGCGAGCACG JTY_0589 669636 - 668494 - | hypothetical protein JTY_0590 670988 - 669852 - | hypothetical protein TERM 317 670375 - 670343 - G 70 -10.6 -3.59107 | overlap 670341 AGACGAACAAGAACA TGGTGCGG-TCGCCGC GCA GCG-CGAACCGCGCCA GCTGTCGGTCGACGG JTY_0591 671091 - 672395 + | putative transcriptional regulatory protein TB27.3 672409 - 673194 + | hypothetical protein PE_PGRS7 677159 - 673239 - | PE-PGRS family protein TERM 318 673622 - 673677 + g 72 -11.6 -3.53012 | opp_overlap 673641 673652 CGCCGCCCATGCCGC CGGTGCCGCCGGGGCCAAAGGCGG AGCCAAGG CCGCCACTGCCGCCGACGCCACCG TTTCCGGCGCGGCCG TERM 319 673727 - 673785 + g 100 -24.4 -3.54424 | overlap 673728 TCGCGCCCAGGGTGG AACCGGTGCCGCCGGCACCGCCGGCACC ACC GGTGCCGCCGGTGCCGCCGGTGCCGCCA TTTCCGCCAGTCCCG TERM 320 673728 - 673784 + g 100 -27.9 -2.72511 | overlap 673727 CGCGCCCAGGGTGGA ACCGGTGCCGCCGGCACCGCCGGCACC ACC GGTGCCGCCGGTGCCGCCGGTGCCGCC ATTTCCGCCAGTCCC TERM 321 674548 - 674515 - G 70 -10.2 -3.64703 | CCGGTCGCACCGAAA GTGGAGCCGGCG CCGCCACTCC CGCCGGCCCCGC TGGGGCCGGCGTTGC TERM 322 675148 - 675170 + g 74 -10.5 -3.76492 | overlap 675149 AGGCCGGGGTTGCCG AGCCTGCCC AGACC GGGCAGGCC TTTGCTGCCGTTGCC TERM 323 675149 - 675169 + g 71 -14 -2.85574 | overlap 675148 GGCCGGGGTTGCCGA GCCTGCCC AGACC GGGCAGGC CTTTGCTGCCGTTGC JTY_0594 677481 - 678239 + | hypothetical protein JTY_0595 678859 - 678368 - | hypothetical protein TERM 324 679054 - 679098 + G 72 -14.2 -2.99947 | gap 1 GGTAATCCGGGAGTC CATCCGGGCGGCGGTCGGC GGCGCCAA GCCG-CCGCCGCGCGGGGG TCTATATGCGGGTTC JTY_0596 678953 - 679168 + | hypothetical protein JTY_0597 679165 - 679572 + | hypothetical protein lpqN 680318 - 679632 - | putative lipoprotein TERM 325 679658 - 679690 + g 82 -17.1 -2.82516 | opp_overlap 679683 TGGTCGTCTGCTCGT CGATGACGTTGGCGG CGT CCATCAACGTCATCG TCTCGTCGTCGAGCG TERM 326 679857 - 679878 + g 71 -2.9 -4.62069 | gap 1, overlap 679858 TGCACTTCCGTCGCC GCTGCCTTGG AAG CCG-GGCAGG TTTTTCAACTCGCCG JTY_0599 680472 - 683105 + | hypothetical protein JTY_0600 685515 - 683128 - | putative integral membrane protein TERM 327 686081 - 686111 + G 75 -9.6 -4.16279 | opp_overlap 686081 686079, overlap 686082 GGACACTGAGGAAGA TCCGATCGTGTGGC AAC GCCACACGCTCGAC TTTTGGGATCATGTG TERM 328 686082 - 686110 + G 72 -13.1 -3.09286 | opp_overlap 686081 686079, overlap 686081 GACACTGAGGAAGAT CCGATCGTGTGGC AAC GCCACACGCTCGA CTTTTGGGATCATGT JTY_0601 685653 - 686375 + | putative transcriptional regulatory protein TERM 329 686420 - 686443 + G 78 -14.6 -3.29144 | gap 1, opp_overlap 686415 CGCGACCAGACGCAG CCCGCCG-TCG ATG CGATCGGCGGG TTCTACCGGACATGC TERM 330 687076 - 687050 - g 81 -12.3 -3.78775 | GGGCTGACCACGAAA GGCGGCCCCAA GGGAG TTGGAACCGCC GTCAACGAAACCCTG yrbE2A 686372 - 687169 + | hypothetical integral membrane protein yrbE2B 687171 - 688058 + | hypothetical integral membrane protein mce2A 688064 - 689278 + | MCE-family protein mce2B 689275 - 690306 + | MCE-family protein TERM 331 691299 - 691283 - g 70 -3.5 -4.56597 | overlap 691284 CGCGGCGTTCAAAAA GCGGGGC ATC GACCCGG AGAACTTCTGGCGCA mce2C 690303 - 691748 + | MCE-family protein mce2Da 691745 - 693295 + | MCE-family protein lprL 693270 - 694478 + | putative MCE-family lipoprotein mce2F 694483 - 696033 + | MCE-family protein JTY_0610 696477 - 696085 - | hypothetical protein JTY_0611 696731 - 696474 - | hypothetical protein JTY_0612 698149 - 696914 - | hypothetical protein JTY_0613 698813 - 698400 - | hypothetical protein JTY_0614 699046 - 698810 - | hypothetical protein JTY_0615 699656 - 699150 - | putative two component sensor kinase TERM 332 699723 - 699739 + r 72 -7.9 -4.15044 | overlap 699724 CAGTTGGTCGGCCAG TCCGCTG AGC CGGCGGG TTTCTTCGAGCGCGG JTY_0616 700240 - 699770 - | putative two component sensor kinase tcrA 701045 - 700284 - | putative two component DNA binding transcriptional regulatory protein JTY_0618 701102 - 701413 + | hypothetical protein lpqO 701485 - 702435 + | putative lipoprotein JTY_0620 702652 - 703260 + | putative resolvase TERM 333 703849 - 703804 - g 75 -13.1 -3.36515 | gap 1, overlap 703802 CCTCATCGCCAAAGA CCGGGCGCGGGTGCTGGCGATC ACG GTGCGCC-GCAACGGCACCCGG CTGGATGCGAGTGTG JTY_0621 703262 - 704005 + | putative transposase JTY_0622 704059 - 704445 + | hypothetical protein JTY_0623 704490 - 704735 + | hypothetical protein JTY_0624 704732 - 705133 + | hypothetical protein JTY_0625 705076 - 705303 + | hypothetical protein JTY_0626 707155 - 705998 - | hypothetical protein JTY_0627 707590 - 707207 - | hypothetical protein JTY_0628 707570 - 708175 + | hypothetical protein JTY_0629 710761 - 708194 - | hypothetical protein JTY_0630 710602 - 711594 + | hypothetical protein JTY_0631 711591 - 711833 + | putative integral membrane protein JTY_0632 712096 - 711830 - | hypothetical protein JTY_0633 712028 - 712255 + | hypothetical protein, antitoxin JTY_0634 712252 - 712653 + | hypothetical protein TERM 334 713890 - 713919 + G 73 -12.9 -3.28712 | opp_overlap 713877, overlap 713891 ATCTGGCGGCCGCCG AGTCGGCGATGGA CGCG TTCATCGCCGACG TTATCCCGGAGAGCG TERM 335 713891 - 713918 + G 77 -16.4 -2.57132 | overlap 713890 TCTGGCGGCCGCCGA GTCGGCGATGGA CGCG TTCATCGCCGAC GTTATCCCGGAGAGC galT 712782 - 713966 + | putative galactose-1-phosphate uridylyltransferase TERM 336 714123 - 714090 - g 77 -16.7 -2.78816 | TCACCCCCGAGCACA CCGGCGCGATCACCG CGCG CAGCGACCGCGCCGA CGGCTCGGCGCGGAT galK 713963 - 715054 + | galactokinase JTY_0637 715449 - 716606 + | hypothetical protein TERM 337 717394 - 717372 - g 70 -2.6 -4.59773 | overlap 717373 GGTGACGGTGAAAAA CGGTCAGG GGGACAT CCTGGCCA CGGCCTTCCTGCAGG JTY_0638 716617 - 717564 + | hypothetical protein JTY_0639 717657 - 717911 + | hypothetical protein TERM 338 718069 - 718049 - g 70 -11.1 -3.48924 | GCACTCGTGATAGAA GCCCGCTTC GGT GAACCGGGC GGACGTGAGCTGGAT JTY_0640 717911 - 718306 + | hypothetical protein JTY_0641 719140 - 718400 - | putative transmembrane protein JTY_0642 719272 - 719532 + | hypothetical protein JTY_0643 719529 - 719936 + | hypothetical protein JTY_0644 721159 - 720008 - | hypothetical protein TERM 339 720412 - 720377 - G 82 -6 -4.72272 | gap 1 CCCGCGGATCAAAAA GTCGCCCTG-ACCCGGC ACC GCCAGGTGCTCGTCGAC GACGATTCCGATCTG recD 722979 - 721252 - | putative exonuclease V alpha chain TERM 340 722140 - 722107 - G 71 -12.3 -3.23216 | gap 1 GCCGACGAGGATCAA CCGGGCGCCCG-GGCG CAC CGCCTCGGCCAGCCGG GCCATCAGCGTCAGC recBa 726259 - 723566 - | putative exonuclease V subunit beta TERM 341 724696 - 724676 - G 70 -11.1 -3.53811 | CTGAGCGGCCTGAAA CACCGCGGC CAC ACCGCGATG GCGTGCGTGGTCGGC TERM 342 725172 - 725153 - G 88 -16.4 -3.75629 | CACGCGCAACCGAAA CGGCGCCG GGCG CGGCGCCG AGGCCAGGCGGTGCC TERM 343 725969 - 726025 + g 78 -15 -3.28712 | CTTCTGGGCGCGCTC GGCGTCGCTGCCGCGCAGCAG-GTGCTC GAC GAGCTCGCCGCTCGGCGGC-GCGTCGCC TTGTAGCGCGCCCAA recC 729552 - 726259 - | putative exonuclease V gamma chain TERM 344 726606 - 726585 - G 74 -15.1 -3.02144 | CCAGCTCCCGCAATA CCGCCACCG GGTC CGGCGGCGG CACGAAAAGCCTTCT TERM 345 727773 - 727728 - G 75 -9.1 -4.07568 | gap 4, overlap 727729 727755 GCTGCGCGTCCAAAA GCGCTCGCACGTCGGGCAGCCGC AACA GCGGC-GCC-G-CGCGCGAAC-C GGCGCGCGCCAGCAC TERM 346 728576 - 728628 + g 79 -11.2 -3.9941 | gap 1, opp_overlap 728560 CTACGCTCGGCGGGT CGCGGCGCGTTGCCGGCGATGTCGG CTTG CAGCCATC-CCAGCAACGTGTCGGG TTTGGTTGTGGCACC echA3 730524 - 729829 - | enoyl-CoA hydratase TERM 347 730246 - 730198 - G 72 -7.3 -4.29304 | opp_overlap 730202 GCAGGACAACAGAAA CGCGCCCATGGCGATGGCGTG ACCGGTG CACGCCATCACCACCGGTTTG GGGTAGGACAAGAGG TERM 348 730202 - 730242 + g 70 -11.1 -3.59979 | opp_overlap 730198 GACAACAGAAACGCG CCCATGGCGATGGCGTG ACCGGTG CACGCCATCACCACCGG TTTGGGGTAGGACAA JTY_0650 731403 - 730573 - | hypothetical protein JTY_0651 732270 - 731557 - | putative glyoxalase II TERM 349 732298 - 732318 + H 71 -11.1 -3.53012 | overlap 732307 TGTCTTGTCCATCGC CGCCCAGAC CGC GTCTTGGCG TTTGCAGCCCGGGAC JTY_0652 732350 - 732601 + | hypothetical protein rpmG2 732949 - 733116 + | 50S ribosomal protein L33 JTY_0654 733167 - 733643 + | hypothetical protein JTY_0655 733630 - 734058 + | hypothetical protein JTY_0656 734062 - 734562 + | hypothetical protein TERM 350 735102 - 735072 - g 71 -9.6 -3.85698 | GGCCCTGGTGACAAA GCCGGTGGTGCG GCCGCAA CGTCCCACCGGC AAGCGGTCGCGGTCG secE 734974 - 735459 + | preprotein translocase subunit SecE nusG 735491 - 736207 + | transcription antitermination protein rplK 736259 - 736687 + | 50S ribosomal protein L11 rplA 736754 - 737461 + | 50S ribosomal protein L1 TERM 351 737520 - 737479 - T 100 -29.7 -2.78384 | gap 1, opp_overlap 737479 737486, overlap 737486 TCCCCGGCGAGCAGA CGCATAAGCCCCCG-CACGC ACG GCGTGTCGGGGGCTTATGCG TCTGCTCGCCGGGCT TERM 352 737479 - 737520 + T 100 -29.7 -2.78463 | gap 1, opp_overlap 737479 737486, overlap 737486 TCCCCGGCGAGCAGA CGCATAAGCCCCCG-CACGC ACG GCGTGTCGGGGGCTTATGCG TCTGCTCGCCGGGCT TERM 353 737513 - 737486 - T 95 -19.2 -3.40299 | gap 1, opp_overlap 737479 737486, overlap 737479 CGAGCAGACGCATAA GCCCCCG-CACGC ACG GCGTGTCGGGGGC TTATGCGTCTGCTCG TERM 354 737486 - 737513 + T 95 -19.2 -3.40299 | gap 1, opp_overlap 737486 737479, overlap 737479 CGAGCAGACGCATAA GCCCCCG-CACGC ACG GCGTGTCGGGGGC TTATGCGTCTGCTCG mmaA4 738440 - 737535 - | methoxy mycolic acid synthase 4 mmaA3 739386 - 738505 - | methoxy mycolic acid synthase 3 mmaA2 740397 - 739534 - | methoxy mycolic acid synthase 2 TERM 355 739643 - 739655 + g 75 -4.8 -4.70583 | TCTTCGGACTGGATC GCGA TGGCC TCGC TTTTGTGTTCCTGCA mmaA1 741424 - 740564 - | methoxy mycolic acid synthase 1 lipG 742376 - 741471 - | putative lipase/esterase TERM 356 741997 - 741941 - G 72 -13.1 -3.21276 | gap 2, overlap 741986 741987 TGTTGCTGGAGAAGA TGACCGCCAGGGTTTTCGTCCGCTGCG CGAAT CGC-GCGG-CGAAAATCTGGGCGATCA TGCCGCCCATCGACG JTY_0666 743854 - 742388 - | hypothetical protein TERM 357 743389 - 743417 + g 73 -13.1 -3.31792 | opp_overlap 743380 743372, overlap 743406 743407 CGAACAGCCGGGCCG GCTCGTCGCCGAG TTC CTCGACGAAGAGC TTGTGCACCTCGTCG TERM 358 743406 - 743433 + g 79 -7.6 -4.56597 | overlap 743389 743407 TCGTCGCCGAGTTCC TCGACGAAGAGC TTGT GCACCTCGTCGG TTTTTGCGGGCGGCA TERM 359 743823 - 743850 + g 75 -15.7 -2.73542 | opp_overlap 743823, overlap 743822 CCGAATGTGTAATGA GGGCGGAAATC CGGCCC GATTTCCGCCC TCATTACACATTCGG TERM 360 743850 - 743823 - G 75 -15.7 -2.73542 | opp_overlap 743822 743823 CCGAATGTGTAATGA GGGCGGAAATC CGGCCC GATTTCCGCCC TCATTACACATTCGG TERM 361 744914 - 744902 - g 75 -4.8 -4.63527 | overlap 744903 CGACCAGCTCAAAAA GGTC GCGCT GACC CGCAACGTGCTCCTG TERM 362 746495 - 746459 - g 86 -17.9 -3.16668 | CAACACGTTCACCAA GGCCGTGCTGGCCGAGG CCG CCCCGGCCTACACCGCC GAACTGCAGCGGCAG JTY_0667 743940 - 748136 + | alpha-mannosidase fabD2 748133 - 748807 + | putative malonyl CoA-acyl carrier protein transacylase JTY_0669 748807 - 749715 + | putative sugar kinase TERM 363 749775 - 749717 - f 80 -16.1 -2.59564 | gap 1, opp_overlap 749732 749773 CGGCCATCGCATAAT GCCGATTGTGAATCTGGCGACGCGACAC GCCG GTGCGGCGTCGCGGGATTCACACTCGG- CGATACGTGTCGCCG TERM 364 749773 - 749790 + F 79 -9.1 -4.18018 | opp_overlap 749717, overlap 749732 CGCGGGATTCACACT CGGCGAT ACGT GTCGCCG TTTTGGCTGACCGGA TERM 365 749942 - 749969 + F 82 -14.9 -3.27298 | gap 1 GCCGGCCTAGTTCCA CGCCCCGACCGC TTCCT GCG-TCGGGGCG TTCGTCGTTCCCGGG TERM 366 750565 - 750552 - g 74 -8.1 -4.25256 | CCTGCAGGAAAAGAA GGCCT GCCC AGGCC CAGACTCAGCCGAGT rplJ 750046 - 750582 + | 50S ribosomal protein L10 rplL 750619 - 751011 + | putative 50S ribosomal protein L7/L12 JTY_0672 751699 - 751004 - | putative transcriptional regulatory protein TERM 367 752181 - 752123 - g 73 -12.5 -3.36273 | opp_overlap 752136, overlap 752119 CGGTCCCAACACCAA CGT-GCTGACCCACGCCGGACGCACCC TGGCCTT GGTTGAGGCCGGCGTGG-TCAACTACG AACTCACCGATGAGC JTY_0673 751770 - 753275 + | putative dioxygenase mkl 753287 - 754366 + | putative ribonucleotide-transport ATP-binding protein ABC transporter JTY_0675 755137 - 754754 - | hypothetical protein JTY_0676 755387 - 755232 - | hypothetical protein JTY_0677 756179 - 755463 - | putative integral membrane protein TERM 368 756153 - 756123 - G 73 -11 -3.75024 | overlap 756124 CTCGACGACCAAGAA GGCCCCAAGTCCCC AGC GGTGACTGGGGGCT ACGGTATCGGCACGG TERM 369 756152 - 756124 - G 73 -14.5 -2.84693 | overlap 756123 TCGACGACCAAGAAG GCCCCAAGTCCCC AGC GGTGACTGGGGGC TACGGTATCGGCACG JTY_0678 756763 - 756455 - | hypothetical protein JTY_0679 756995 - 756750 - | hypothetical protein TERM 370 757086 - 757045 - R 100 -29.7 -2.78384 | gap 1, opp_overlap 757052, overlap 757052 CGGCCGGCGAGCAGA CGCATAAGCCCCCG-CACGC TCG GCGTGTCGGGGGCTTATGCG ACTGCTCGCCCGGGG TERM 371 757079 - 757052 - R 95 -19.2 -3.40299 | gap 1, opp_overlap 757052, overlap 757045 CGAGCAGACGCATAA GCCCCCG-CACGC TCG GCGTGTCGGGGGC TTATGCGACTGCTCG TERM 372 757052 - 757079 + r 93 -19.2 -3.31792 | gap 1, opp_overlap 757052 757045 CGAGCAGACGCATAA GCCCCCG-CACGC TCG GCGTGTCGGGGGC TTATGCGACTGCTCG JTY_0680 757542 - 757105 - | hypothetical protein TERM 373 757242 - 757202 - G 71 -12.6 -3.32698 | opp_overlap 757209, overlap 757200 TCAGCCGAGACAAGA GCGGT-CGCGCCGGCGCTTG CGG CAACCGCCG-CGAGCACCGC GTCGCAGGCTTCAAG TERM 374 757209 - 757265 + g 70 -12 -3.48276 | opp_overlap 757202 757200 AGACAAGAGCGGTCG CGCCGGCGCTTGCGGCAACCGCCGCG AGCAC CGCGTCGCAGGCTTCAAGCCCTGGCG TTGTCTCGAACAGCG JTY_0681 757907 - 757539 - | hypothetical protein atsD 757907 - 760270 + | putative arylsulfatase JTY_0683 760302 - 760574 + | hypothetical protein JTY_0684 760571 - 760909 + | hypothetical protein JTY_0685 760906 - 761079 + | hypothetical protein TERM 375 762173 - 762197 + G 77 -13.5 -3.59979 | CAGCGTCAAGGTGAT CCCGAGCCGCG GCG CGTGGCTCGAG TTTGACGTCGACAAG TERM 376 762930 - 762914 - g 77 -13.7 -3.35679 | opp_overlap 762927, overlap 762891 GGGGTTGACCCACAA GCGCCGA CTG TCGGCGC TGGGGCCCGGCGGTC rpoB 761577 - 765095 + | DNA-directed RNA polymerase subunit beta rpoC 765140 - 769090 + | DNA-directed RNA polymerase subunit beta' TERM 377 769104 - 769145 + T 86 -18.2 -2.79302 | gap 1, opp_overlap 769104 769111, overlap 769111 AGGTGGGCGAGCAGA CGCAGAATCGCA-CGCGAA ATGCC TGCGCGATGCGATTCTGCG TCTGCTCGCCGTGGT TERM 378 769145 - 769104 - T 87 -18.9 -2.78463 | gap 1, opp_overlap 769104 769111, overlap 769111 AGGTGGGCGAGCAGA CGCAGAATCGCA-CGCGAAA TGC CTGCGCGATGCGATTCTGCG TCTGCTCGCCGTGGT TERM 379 769316 - 769327 + T 72 -7.2 -4.13995 | opp_overlap 769316 ACACGTCGTGAGGAA CCCC GGTC GGGG TTTAGTTTATCGGCC TERM 380 769416 - 769432 + T 77 -13.7 -3.27298 | GTTCCATCGCCGACG CCCAGGC ATG GCCTGGG TTGGTGATTGCGGCC JTY_0688 771367 - 769454 - | putative hydrolase TERM 381 771998 - 772035 + G 76 -8.3 -4.18018 | gap 1 GCTTCGACACCATCG CCCGGCTCTGG-GACGTC ATC GGCGACACCGGAATCGGG TTTTGCCTGGACACC end 771562 - 772320 + | endonuclease IV lpqP 772352 - 773194 + | putative lipoprotein fadE8 773254 - 774882 + | putative acyl-CoA dehydrogenase TERM 382 775523 - 775478 - g 74 -12.5 -3.54741 | gap 1, opp_overlap 775468 GACCAGCGGGCCAAA CGGCTG-CTGTTCACCGGCGAT TGC ATCACCGGCGCGCAGGCCGCCG AGTGGGGCCTGGCGG echA4 774893 - 775831 + | enoyl-CoA hydratase JTY_0693 775834 - 776556 + | hypothetical protein echA5 776553 - 777344 + | enoyl-CoA hydratase mmpL5 780250 - 777356 - | putative transmembrane transport protein mmpS5 780675 - 780247 - | putative membrane protein mmpS5 TERM 383 780603 - 780587 - G 70 -3.6 -4.56702 | TCGGAACCAAAGAAA GTGCGG ATCCG CTGCAC CGTGAAGCCGGCGAT JTY_0697 780760 - 781257 + | hypothetical protein JTY_0698 781810 - 781313 - | hypothetical threonine rich protein JTY_0699 782186 - 781812 - | putative transmembrane protein TERM 384 782072 - 782091 + g 70 -10 -3.66844 | GCTCGATGCCCTGCC CGGTGACA TGGG TGTCGCCG TTCTTGGCGTGTGCG JTY_0700 782491 - 783081 + | putative transcriptional regulatory protein rpsL 783330 - 783704 + | 30S ribosomal protein S12 rpsG 783704 - 784174 + | 30S ribosomal protein S7 TERM 385 786071 - 786051 - g 86 -9 -4.57569 | gap 1 GCAGGTGCTCAAAAA GGCTGCCGC ACTT GCG-CAGCC GGTGATCCTGGAACC fusA1 784255 - 786360 + | elongation factor G tuf 786591 - 787781 + | elongation factor Tu TERM 386 787846 - 787799 - f 100 -34.6 -2.78816 | opp_overlap 787799 787806, overlap 787806 CTACCGGCCACCAGA CGCAAAAGAACATGATGGGCGC ACCA GCGCCCATCATGTTCTTTTGCG TCTGCTCGCGAAAAT TERM 387 787799 - 787846 + F 100 -34.6 -2.78463 | opp_overlap 787799 787806, overlap 787806 CTACCGGCCACCAGA CGCAAAAGAACATGATGGGCGC ACCA GCGCCCATCATGTTCTTTTGCG TCTGCTCGCGAAAAT TERM 388 787806 - 787839 + F 100 -24.1 -4.24948 | opp_overlap 787799 787806, overlap 787799 CCACCAGACGCAAAA GAACATGATGGGCGC ACCA GCGCCCATCATGTTC TTTTGCGTCTGCTCG TERM 389 787839 - 787806 - f 100 -24.1 -4.24948 | opp_overlap 787806 787799, overlap 787799 CCACCAGACGCAAAA GAACATGATGGGCGC ACCA GCGCCCATCATGTTC TTTTGCGTCTGCTCG JTY_0705 787919 - 788716 + | hypothetical protein fabG 788869 - 789696 + | 3-ketoacyl-(acyl-carrier-protein) reductase JTY_0707 789710 - 790930 + | putative ferredoxin reductase JTY_0708 791181 - 790927 - | hypothetical protein JTY_0709 792843 - 791794 - | hypothetical protein JTY_0710 793436 - 792840 - | putative transcriptional regulatory protein TERM 390 793796 - 793771 - g 75 -4.8 -4.58395 | overlap 793772 793773 GTCATTTCTGAAAAA TC-GCACCATCC TCGC GG-TGGTGCAGA CGCTGGCGGATTATC JTY_0711 793601 - 793930 + | hypothetical protein pqqE 793927 - 795102 + | putative coenzyme pqq synthesis protein E lldD1 795105 - 796295 + | putative L-lactate dehydrogenase JTY_0714 796485 - 797240 + | hypothetical protein JTY_0715 797289 - 798701 + | putative membrane sugar transferase JTY_0716 798703 - 800142 + | putative dehydrogenase JTY_0717 800603 - 800932 + | hypothetical protein JTY_0718 800980 - 801213 + | hypothetical protein JTY_0719 801398 - 801619 + | hypothetical protein rpsJ 802256 - 802561 + | 30S ribosomal protein S10 rplC 802578 - 803231 + | 50S ribosomal protein L3 TERM 391 803493 - 803455 - g 71 -12.3 -3.31144 | gap 1 GCCCTACCGGCAGAA GGGGACCG-GTCGTGCCC GGCA GGGCTCGACGCGGGCGCC GCAGTTCACCGGCGG rplD 803231 - 803902 + | 50S ribosomal protein L4 rplW 803902 - 804204 + | 50S ribosomal protein L23 rplB 804351 - 805193 + | 50S ribosomal protein L2 rpsS 805234 - 805515 + | 30S ribosomal protein S19 TERM 392 805990 - 805971 - g 81 -10.6 -4.15044 | overlap 805931 805983 GCGCCGGCCAAGAAA GCGGCCGC CAAA GCGCCCGC CAAGAAGGCACCCGC TERM 393 806058 - 806040 - g 77 -8 -4.43208 | ACACCCGCAAAGAAA GCGCCCGC CAA GAAGGCGC CCGCCAAGGCTTCTG rplV 805512 - 806105 + | 50S ribosomal protein L22 rpsC 806105 - 806929 + | 30S ribosomal protein S3 rplP 806933 - 807349 + | 50S ribosomal protein L16 rpmC 807349 - 807582 + | 50S ribosomal protein L29 TERM 394 807689 - 807653 - g 70 -10.9 -3.61398 | gap 1 GGCGGCCCCCAAGAA GGCCGCACCCAACGAC GCTGAG GCCAT-AGGTGCGGCC AACGCGGCAAACGTT rpsQ 807579 - 807989 + | 30S ribosomal protein S17 TERM 395 808011 - 808038 + F 100 -19.2 -4.12188 | gap 1, opp_overlap 808011 CGAGCAGTCGCAAAA GCCCCCGACACGC GCG GCGTG-CGGGGGC TTTTGCGACTGCTCG TERM 396 808038 - 808011 - f 100 -19.2 -4.12188 | gap 1, opp_overlap 808011 CGAGCAGTCGCAAAA GCCCCCGACACGC GCG GCGTG-CGGGGGC TTTTGCGACTGCTCG atsA 808158 - 810521 + | putative arylsulfatase JTY_0732 810569 - 811468 + | hypothetical protein JTY_0733 811769 - 812710 + | putative transmembrane protein TERM 397 813475 - 813487 + G 75 -4.7 -4.57569 | opp_overlap 813442, overlap 813476 CCCGACAACGACCCG CGCGG CAC CCGCA TTTTTGGACCGGTCG rplN 813196 - 813564 + | 50S ribosomal protein L14 rplX 813565 - 813882 + | 50S ribosomal protein L24 rplE 813882 - 814445 + | 50S ribosomal protein L5 TERM 398 814509 - 814476 - g 77 -12.6 -3.62597 | gap 2, overlap 814461 GGCACTGGTCAACAA GGC-CGCA-GGCAAAC CGAG GTTTGCCGTGCGCGCC TACACCCGTTGCAGC rpsN1 814450 - 814635 + | 30S ribosomal protein S14 TERM 399 814935 - 814979 + G 75 -14.4 -3.31263 | gap 1, opp_overlap 814927 814938 814974, overlap 814936 AGAACGAGGGGTACA TCAGCGACTT-CCGAACCGAG GACG CTCGGGTCGGTAAATCGCTGG TTATCCAGCTCAAGT TERM 400 814936 - 814978 + G 74 -15.7 -2.58544 | gap 1, opp_overlap 814927 814938 814974, overlap 814935 GAACGAGGGGTACAT CAGCGACTT-CCGAACCGAG GACG CTCGGGTCGGTAAATCGCTG GTTATCCAGCTCAAG TERM 401 814976 - 814938 - g 71 -14.7 -2.63102 | gap 1, opp_overlap 814936 814935, overlap 814927 814974 ACGAGGGGTACATCA GCGACTT-CCGAACCGAG GACG CTCGGGTCGGTAAATCGC TGGTTATCCAGCTCA rpsH 814799 - 815197 + | 30S ribosomal protein S8 TERM 402 815661 - 815644 - g 90 -4 -5.38958 | overlap 815646 ATCGACAAACAAAAA GTCGGC CAGATC GCCGCC AATATCCGCCGTCTT rplF 815221 - 815760 + | 50S ribosomal protein L6 TERM 403 815999 - 815981 - g 100 -10.2 -4.82901 | overlap 815983 GCCGGGTGACAAAAA GGCCCGCA GTG TGCGGGTC GGCCAGTTGATCGCC rplR 815763 - 816131 + | 50S ribosomal protein L18 TERM 404 816776 - 816790 + G 82 -11.4 -4.09685 | opp_overlap 816775 816770 GTCGGAAAAGTGAAG CGCTGG CCG CCAGCG TTTTGCCGGATAGAA rpsE 816151 - 816813 + | 30S ribosomal protein S5 rpmD 816816 - 817013 + | 50S ribosomal protein L30 rplO 817013 - 817453 + | 50S ribosomal protein L15 TERM 405 817510 - 817469 - f 86 -18.3 -2.78384 | gap 1, opp_overlap 817469 817477, overlap 817476 817477 TTTCGGGCGAGCAGA CGCAAAATGCCCCCGAAA TGCCCAT TTTCGGGGGC-TTTTGCG TCTGCTCGCGGGCCC TERM 406 817469 - 817510 + F 86 -18.3 -2.78384 | gap 1, opp_overlap 817469 817476 817477, overlap 817477 TTTCGGGCGAGCAGA CGCAAAATGCCCCCGAAA TGCCCAT TTTCGGGGGC-TTTTGCG TCTGCTCGCGGGCCC TERM 407 817504 - 817476 - f 85 -10.3 -4.24948 | opp_overlap 817469 817477, overlap 817469 817477 CGAGCAGACGCAAAA TGCCCCCGAAA TGCCCAT TTTCGGGGGCT TTTGCGTCTGCTCGC TERM 408 817503 - 817477 - f 76 -13.8 -3.14487 | opp_overlap 817477 817469, overlap 817476 817469 GAGCAGACGCAAAAT GCCCCCGAAA TGCCCAT TTTCGGGGGC TTTTGCGTCTGCTCG TERM 409 817477 - 817503 + F 100 -13.8 -4.24948 | opp_overlap 817476 817469 817477, overlap 817469 GAGCAGACGCAAAAT GCCCCCGAAA TGCCCAT TTTCGGGGGC TTTTGCGTCTGCTCG sppA 817486 - 819357 + | putative protease IV JTY_0745 820267 - 819362 - | hypothetical protein JTY_0746 821463 - 820360 - | hypothetical protein fucA 822322 - 821666 - | L-fuculose phosphate aldolase serA2 823299 - 822319 - | putative D-3-phosphoglycerate dehydrogenase xylB 823330 - 824676 + | putative D-xylulose kinase TERM 410 825140 - 825092 - g 80 -9.3 -4.26351 | GACGAACCGAAGAAA TGGGCGCCGCCGGCGATGGATCC GGG GGACCCGCCGGCAGCGTCGACGA CGAGATCCGAGCCGC JTY_0750 824689 - 825417 + | hypothetical protein JTY_0751 826462 - 825506 - | hypothetical protein TERM 411 825979 - 826032 + g 77 -15.4 -3.06492 | gap 3, opp_overlap 825973 825972 CGCGCAAATCGACCG CCACGGTGCGCCGGTCGGTCGTGGGTG CCG CACCCA-GGCCGGCCAGCGT-C-GTGG TCTTGAAGTCGATCA TERM 412 826440 - 826452 + g 70 -10.5 -3.70863 | opp_overlap 826428 826440 826439 GAATCGCCCTCAAAG CGGGC ACT GCCCG TTTGCGTCATCTGTA TERM 413 827284 - 827257 - g 70 -11.2 -3.56836 | opp_overlap 827279, overlap 827245 827258 AAAGCATCCTGGAAA GCCGCGGTGGAG TCGT CTTCACCGCGGT CTGCGCGGCCGCGTT TERM 414 827283 - 827258 - g 72 -14.7 -2.73619 | opp_overlap 827279, overlap 827257 827245 AAGCATCCTGGAAAG CCGCGGTGGAG TCGT CTTCACCGCGG TCTGCGCGGCCGCGT secY 826623 - 827948 + | preprotein translocase subunit SecY adk 827945 - 828490 + | adenylate kinase mapA 828493 - 829293 + | methionine aminopeptidase sigL 829366 - 829899 + | RNA polymerase sigma factor SigL JTY_0756 829963 - 830715 + | hypothetical protein TERM 415 831500 - 831521 + G 72 -8.7 -4.07568 | gap 1, opp_overlap 831499 GTCGGCCGTCGAAAC GTTG-CGGCG CAA CGCCGGCGAC TTTTGAGGGCGGGCA JTY_0757 831030 - 831527 + | putative transcriptional regulatory protein TERM 416 831539 - 831580 + F 87 -18.9 -2.78384 | gap 1, overlap 831546 831577 TTGAGGGCGGGCAGA CGCGTAAGCGCCCAATGTCG TGC CGAAA-TGGGCGCTTATGCG TCTGCTCGCGCCCGG JTY_0758 831885 - 832433 + | hypothetical protein JTY_0759 832638 - 833486 + | hypothetical protein JTY_0760 833601 - 834128 + | hypothetical protein JTY_0761 834359 - 834673 + | transposase TERM 417 835196 - 835216 + G 84 -13.9 -3.9461 | overlap 835197 GCGCCGGGGACCGGG GCCGCCGGC GGG GCCGGCGGA TTGTTGTTCGGCAAC TERM 418 835197 - 835215 + G 82 -17.4 -2.96444 | overlap 835196 CGCCGGGGACCGGGG CCGCCGGC GGG GCCGGCGG ATTGTTGTTCGGCAA TERM 419 835247 - 835273 + G 77 -10.1 -3.9461 | gap 1 GGCGGCGCGGGCGGG TCCGGCGCGCCC GGCG GGGC-CGGCGGA TTGTTGTTCGGCAAC PE_PGRS8 834815 - 835333 + | PE-PGRS family protein JTY_0763 836268 - 835711 - | hypothetical protein JTY_0764 836771 - 836265 - | putative transcriptional regulatory protein TERM 420 836816 - 836802 - H 88 -6.4 -5.22943 | AGTAAACCCAAAAAA CACAAC ATC GTTGCG GAGCGTGATCGCACC TERM 421 837151 - 837196 + G 70 -13.1 -3.04792 | overlap 837186 CGCATGCGGCGATCG GGCTGCTGCCGTTGGTGGCCG GCTG CGACCGCCGACATCGGCGGCC TGTTCGCGGTGCTCG JTY_0765 836979 - 837506 + | hypothetical protein TERM 422 837980 - 838038 + G 81 -15.2 -3.61398 | gap 3, overlap 837980 TCGGTAATGGTGGGG CC-GGCGGGTCCGCCGCCGCTGGCTCGGG CCTG CCCG-GCGGG-GCCGGCGGGGCCGCCGGG TTGTTCGGCACCGGC TERM 423 837980 - 838037 + G 100 -21.2 -2.76696 | gap 2, overlap 837980 TCGGTAATGGTGGGG CCGGCGGGTCCGCCGCCGCTGGCTCGGG CCTG CCCG-GCGGG-GCCGGCGGGGCCGCCGG GTTGTTCGGCACCGG TERM 424 839190 - 839206 + G 80 -13.7 -3.71848 | CGGTGGGGCCGGCGG GGCCGGT GGA ACCGGCC TTGTTGGTGGCGACG TERM 425 839461 - 839487 + G 75 -9.2 -4.10953 | overlap 839462 GGGCTGCTGTTCGGC AGCGGCGGCGCC GGC GGCGCCGGCGGA TTTGGTTTCCTCGGT PE_PGRS9 837526 - 839919 + | PE-PGRS family protein TERM 426 840944 - 840980 + G 71 -12.2 -3.28791 | gap 1, opp_overlap 840935, overlap 840919 840945 CGGAAACGCCGGCAT GCTGTTCGGCGCCGCCG GGGT CGGCGGCGTCGG-CGGA TTCTCGAACGGCGGT TERM 427 840945 - 840979 + G 74 -15.7 -2.57132 | gap 1, opp_overlap 840935, overlap 840944 GGAAACGCCGGCATG CTGTTCGGCGCCGCCG GGGT CGGCGGCGTCGG-CGG ATTCTCGAACGGCGG TERM 428 841355 - 841383 + G 70 -11.5 -3.40611 | overlap 841353 841356 CGGCGGATTCGGCGG GGCCGGCGGAGCC GGC GGCGACGCCGGCA TGTTCTTCGGCTCCG TERM 429 841356 - 841382 + G 71 -15 -2.64045 | overlap 841355 841353 GGCGGATTCGGCGGG GCCGGCGGAGCC GGC GGCGACGCCGGC ATGTTCTTCGGCTCC TERM 430 841404 - 841439 + G 78 -13.8 -3.59979 | overlap 841405 TTCGGCTCCGGTGGC TCCGGCGGCGCCGGCG GGGC CGGCGGCTCCGGCGGG TTTGGCCTCCCCAGC TERM 431 841405 - 841438 + G 72 -15.1 -2.75844 | overlap 841404 TCGGCTCCGGTGGCT CCGGCGGCGCCGGCG GGGC CGGCGGCTCCGGCGG GTTTGGCCTCCCCAG TERM 432 842041 - 842097 + G 72 -14.2 -3.05844 | gap 1, overlap 842046 842047 GCACCGGGGGCAGCG GCGGGCCCGGCGCCACCGGCCTCGGCG GGAT TGGCGGGGCCGGCGGAGCC-GCCTTGC TCTTCGGCTCCGGCG TERM 433 842046 - 842093 + G 73 -12.4 -3.37245 | overlap 842041 842047 GGGGGCAGCGGCGGG CCCGGCGCCACCGGCCTCGGCG GGAT TGGCGGGGCCGGCGGAGCCGCC TTGCTCTTCGGCTCC TERM 434 842047 - 842092 + G 74 -15.9 -2.62026 | overlap 842046 842041 GGGGCAGCGGCGGGC CCGGCGCCACCGGCCTCGGCG GGAT TGGCGGGGCCGGCGGAGCCGC CTTGCTCTTCGGCTC TERM 435 842454 - 842480 + G 78 -15 -3.2794 | GGAGTTTCCGGAGGG GCCGGCGGGGCC GGC GGCGACGCCGGC TTGCTCTCCCTCGGC TERM 436 842538 - 842576 + G 77 -13.7 -3.37245 | GGTTCCAGCCTGACC GCCGCCGGCGTGGTCGG CGGCA TCGGCGGCGCCGGAGGC TTGCTCTTCGGCTCC TERM 437 842779 - 842803 + G 82 -12.7 -3.91434 | overlap 842780 842798 TCGGTCTCGGAGGTG ACGGCGGCGCC GGC GGCGCCACCGG TTTGTCCGGTGCTTT TERM 438 842780 - 842802 + G 79 -16.2 -2.94137 | overlap 842779 842798 CGGTCTCGGAGGTGA CGGCGGCGCC GGC GGCGCCACCG GTTTGTCCGGTGCTT PE_PGRS10 840318 - 842999 + | PE-PGRS family protein JTY_0768 843090 - 843347 + | hypothetical protein JTY_0769 843371 - 843799 + | hypothetical protein JTY_0770 844017 - 843880 - | hypothetical protein JTY_0771 844176 - 844421 + | hypothetical protein TERM 439 844496 - 844455 - T 100 -25.5 -2.79183 | gap 1, opp_overlap 844455 844462, overlap 844462 CTGAGGGCGAGCAGA CGCATAAGCGCCCAATTTCG TGT CGAAAT-GGGCGCTTATGCG TCTGCTCGCGCGCGC TERM 440 844455 - 844496 + T 100 -25.5 -2.78384 | gap 1, opp_overlap 844455 844462, overlap 844462 CTGAGGGCGAGCAGA CGCATAAGCGCCCAATTTCG TGT CGAAAT-GGGCGCTTATGCG TCTGCTCGCGCGCGC TERM 441 844489 - 844462 - T 83 -15 -3.40299 | gap 1, opp_overlap 844455 844462, overlap 844455 CGAGCAGACGCATAA GCGCCCAATTTCG TGT CGAAAT-GGGCGC TTATGCGTCTGCTCG TERM 442 844462 - 844489 + T 83 -15 -3.40299 | gap 1, opp_overlap 844462 844455, overlap 844455 CGAGCAGACGCATAA GCGCCCAATTTCG TGT CGAAAT-GGGCGC TTATGCGTCTGCTCG mmsB 845374 - 844490 - | putative 3-hydroxyisobutyrate dehydrogenase TERM 443 845273 - 845234 - G 73 -10.7 -3.72576 | overlap 845237 GGGCGCGCTACGAAA CACCGCGACA-CCGTGCGC GGCG GCGC-CGGACGCCGCCGTG GGTGCCGGGTCGAAT fadE9 846557 - 845385 - | putative acyl-CoA dehydrogenase TERM 444 846336 - 846306 - G 84 -5.2 -4.87665 | overlap 846307 846308 GTGGATGGACAAAAA CGCGGCGGTCACCG GGT CGGCGATCGCCAAC TGCTCGAAGATGCGC mmsA 848096 - 846564 - | putative methylmalonate-semialdehyde dehydrogenase TERM 445 847783 - 847813 + g 100 -18.2 -4.15565 | ATTACCTCGATGCCG CGCTGGACGTCGCC GCG GGCGTCGGCCAGCG TTTTGCCGTGCTCAC PE_PGRS11 848302 - 850056 + | PE-PGRS family protein PPE12 852183 - 850246 - | PPE family protein JTY_0777 852670 - 852485 - | putative transposase JTY_0778 853609 - 852884 - | hypothetical protein phoP 855109 - 855852 + | putative two component system response transcriptional positive regulator TERM 446 857065 - 857038 - g 70 -10.6 -3.56821 | gap 1 AGCACACCCCGGAAA GCGCCGACGTCAC CGT GCGA-GTCGGCAC CGAGGGCGACGACGC phoR 855897 - 857354 + | putative two component system response sensor kinase membrane associated JTY_0781 857658 - 857326 - | hypothetical protein JTY_0782 858186 - 857767 - | hypothetical protein adhB 859326 - 858199 - | putative zinc-containing alcohol dehydrogenase NAD dependant JTY_0784 859970 - 859425 - | hypothetical protein JTY_0785 860179 - 859973 - | putative ferredoxin cyp51 861537 - 860182 - | cytochrome P450 51 JTY_0787 862364 - 861537 - | short chain dehydrogenase cyp123 863571 - 861946 - | putative cytochrome P450 123 JTY_0789 864209 - 863568 - | hypothetical protein TERM 447 863728 - 863779 + g 86 -18.3 -3.05384 | gap 3, opp_overlap 863717 AACACGGTACCGGGA TCGGCGCC-AGGTCCGATCGCCG-AT GTG ATGCGGCGGT-GGATCTCGGCGCCGA TTCGGTCGCGCACCG aldA 864411 - 865880 + | putative aldehyde dehydrogenase NAD dependant JTY_0791 865911 - 866657 + | short chain dehydrogenase JTY_0792 866755 - 867642 + | putative dehydrogenase/reductase JTY_0793 867639 - 868073 + | putative 4-carboxymuconolactone decarboxylase purD 868085 - 869353 + | phosphoribosylamine--glycine ligase ggtA 870888 - 869350 - | putative cephalosporin acylase TERM 448 870506 - 870496 - G 70 -8.2 -4.0162 | CGGTGAGACCAGAAA GCCG TTG CGGC CGTACGAGATGGCGG TERM 449 870666 - 870696 + g 71 -3.1 -4.59773 | overlap 870667 GCGTCCACGCCGAGG GTGAGCGGCCGGA CGCGT TCAGGCCGTGCAG TTTTTGCCCGTCCCA TERM 450 870937 - 870922 - R 76 -10.4 -3.91798 | GAAGGTCCAACCAAA CGGCGT GCTC ACGCCG CTTAACCTGTGAGCA JTY_0796 871850 - 870939 - | hypothetical protein JTY_0797 871906 - 872529 + | hypothetical protein JTY_0798 873262 - 872483 - | hypothetical protein TERM 451 872658 - 872673 + g 83 -8.2 -4.65895 | overlap 872653 TCGATCGGATCCTCG GCGGCC CGCA GGTCGC TTTTTCGCTGCGCGA purB 873507 - 874925 + | putative adenylosuccinate lyase cyp126 874930 - 876174 + | putative cytochrome P450 126 JTY_0801 876791 - 876171 - | putative transmembrane protein purC 876842 - 877735 + | phosphoribosylaminoimidazole-succinocarboxamide synthase ptrB 877732 - 879891 + | putative protease II emrB 881941 - 880319 - | putative multidrug resistance integral membrane efflux protein TERM 452 881638 - 881614 - G 75 -7 -4.30978 | CCGAACCCATGAAAA GCCGCCTGGT GCCGA ACCGGTCGGC CGCCCAACCGGCTGT JTY_0805 882139 - 882825 + | hypothetical protein JTY_0806 882841 - 883416 + | hypothetical protein JTY_0807 883434 - 884540 + | hypothetical protein JTY_0808 884964 - 884575 - | hypothetical protein JTY_0809 884959 - 885918 + | hypothetical protein JTY_0810 886024 - 886263 + | phosphoribosylformylglycinamidine synthase subunit PurS purQ 886260 - 886934 + | phosphoribosylformylglycinamidine synthase subunit I JTY_0812 887550 - 886951 - | hypothetical protein JTY_0813 888300 - 887572 - | hypothetical protein JTY_0814 889340 - 888297 - | hypothetical protein JTY_0815 890146 - 889337 - | putative transcriptional regulatory protein JTY_0816 890219 - 890524 + | hypothetical protein JTY_0817 891248 - 890637 - | putative oxidoreductase TERM 453 891072 - 891113 + g 71 -9.3 -3.78597 | gap 1, overlap 891075 891076 891078 TAGCGGTCGTCCGGC GGCACGGGCGCCGATCGCGG TGC CGGCGATCCGCGCCTG-GTA TTTGCCTTGGTGGGT TERM 454 891075 - 891111 + g 77 -14.3 -3.47526 | overlap 891072 891076 891078 CGGTCGTCCGGCGGC ACGGGCGCCGATCGCGG TGC CGGCGATCCGCGCCTGG TATTTGCCTTGGTGG TERM 455 891076 - 891110 + g 85 -17.8 -2.68034 | overlap 891075 891072 891078 GGTCGTCCGGCGGCA CGGGCGCCGATCGCGG TGC CGGCGATCCGCGCCTG GTATTTGCCTTGGTG TERM 456 891078 - 891108 + g 82 -16.8 -2.87581 | overlap 891076 891075 891072 TCGTCCGGCGGCACG GGCGCCGATCGCGG TGC CGGCGATCCGCGCC TGGTATTTGCCTTGG JTY_0818 892135 - 891236 - | putative oxidoreductase TERM 457 893058 - 893080 + r 76 -13.4 -3.14344 | CAGCAGGCCCTGCGG ACCTGGCTGG ACA CCAGCCAGGA TTGGTCGCCGAACTC TERM 458 893287 - 893272 - R 76 -9 -4.08216 | TGACCCGGTTCAAAA GCGAAG CCGC CTTCGC CTGCCATGCCGCAGT cfp29 894408 - 893611 - | 29 KDa antigen JTY_0821 895412 - 894405 - | hypothetical protein pepC 895457 - 896758 + | probable aminopeptidase JTY_0823 896770 - 897117 + | hypothetical protein JTY_0824 897767 - 897111 - | hypothetical protein TERM 459 897974 - 897954 - H 73 -8.9 -4.08216 | GGACCCCGCGCAAAA CGTCGGTGC TGG ACACCGTCG AACACGCCGCGACCA purL 897959 - 900223 + | phosphoribosylformylglycinamidine synthase II JTY_0826 900220 - 900849 + | hypothetical protein TERM 460 900981 - 901007 + GT 72 -12.2 -3.29147 | opp_overlap 900979 TCAGGTGCATAGACT TAGGGCCGCGGA GCA TCCGCGGCCGGA TTACGTTCTCTTACA cpsY 903469 - 901871 - | putative UDP-glucose-4-epimerase JTY_0827 900970 - 901926 + | hypothetical protein TERM 461 903352 - 903332 - Gf 74 -9.7 -3.86015 | overlap 903319 903334 CACCTTTCGCAGAAA GACCAGATC TTC GATCTGGGC CTCCTGGGGGGTCAG TERM 462 903350 - 903334 - Gf 71 -10.9 -3.51934 | overlap 903332 CCTTTCGCAGAAAGA CCAGATC TTC GATCTGG GCCTCCTGGGGGGTC JTY_0829 903774 - 904163 + | hypothetical protein TERM 463 904884 - 904870 - g 72 -7.1 -4.2828 | GTTCATGGACGAAAA CACGC TTTAT GCGTG CCGCGACCCGTACGG purF 904250 - 905833 + | amidophosphoribosyltransferase purM 905864 - 906958 + | putative phosphoribosylaminoimidazole synthetase JTY_0832 907226 - 907044 - | hypothetical protein TERM 464 907278 - 907250 - R 89 -14.6 -3.90744 | opp_overlap 907249 907240 907271 CCCCTCGCGAAATAA CGGAGCGGCCTA ACGAG TAGGCGGCTCCG ATCTCTGGTGTCGTT JTY_0833 908479 - 907373 - | hypothetical protein TERM 465 908509 - 908498 - H 76 -7.2 -4.28762 | opp_overlap 908497 ACAACTCTACGAAAA GCCG CGCT CGGC CTCGTTGACCAGCGT JTY_0834 908562 - 909431 + | 4-amino-4-deoxychorismate lyase JTY_0835 910157 - 909477 - | hypothetical protein sseC2 910622 - 910320 - | hypothetical protein TERM 466 910550 - 910561 + g 84 -5.8 -4.86385 | overlap 910526 CGTCCACTACGCGGC CGGT GATC ACCG TTTCTTTTTCCAGGT cysA2 911457 - 910624 - | putative thiosulfate sulfurtransferase thiX 912172 - 911750 - | putative thioredoxin JTY_0839 912981 - 912169 - | hypothetical protein TERM 467 913792 - 913765 - g 75 -9.1 -4.03978 | gap 1 AACGTCGGATACAAA GCTGTTCGGCCG GCGCG CGGCCGACC-GC CGGCCGCGGACCCCG JTY_0840 913111 - 913878 + | transcriptional regulatory protein JTY_0841 913875 - 914822 + | hypothetical protein phoTa 914865 - 915377 + | putative phosphate-transport ATP-binding protein ABC transporter phoY2 916337 - 915696 - | putative phosphate-transport system transcriptional regulatory protein JTY_0845 918449 - 916395 - | hypothetical protein TERM 468 916666 - 916647 - G 95 -5 -5.40072 | gap 1 GCCGGGCGAAAAAAA CACTG-TGG TGG CCAGCAGCG AACTCGGGTAGTCGT TERM 469 917226 - 917196 - G 82 -4.6 -4.9218 | CAGCGACGACAAAAA CAACTGCTGGCG TTTGATG CGCCCGTAGTCG CCATTGCTCTCGGTG TERM 470 917688 - 917725 + g 72 -13.3 -3.09492 | gap 1 CATGACGGTGTCCGA ACGTGCGCCGCCGGCGTC CTC GGCGTCGCCGGCGC-CGA TATTGGCGTTCGCCC TERM 471 918289 - 918256 - G 74 -7.4 -4.26903 | gap 1 GGGAGGTCAGGAAAA GCGGGGCCGAGCCTG GCGAT CAGA-TCGGCCACAC TAACGGCGCCGGTGG JTY_0846 919784 - 918615 - | putative transcriptional regulatory protein desA1 920888 - 919872 - | putative acyl-[acyl-carrier protein] desaturase JTY_0848 921691 - 921050 - | hypothetical protein JTY_0849 921772 - 922827 + | hypothetical protein JTY_0850 923271 - 922879 - | putative transcriptional regulatory protein JTY_0851 923751 - 923329 - | putative deaminase TERM 472 923758 - 923732 - Gg 75 -9.5 -4.09685 | gap 1 GCCCATCGTCGAAAA CCTGC-CATGCC TGCC GGCATGTGCAAG ACATCGGCTGGGACG TERM 473 923926 - 923912 - gH 71 -12.8 -3.06162 | GAGCCGACCGTAAGA CCGGGC CTG GCCCGG CGGGTGGCCGTGAAG TERM 474 923989 - 923977 - gH 70 -10.5 -3.61398 | CCGGCTGGCGAACAA CCCCG AGA CGGGG TGCTAGTCGCGTGAC JTY_0852 923713 - 924003 + | putative transposase TERM 475 924719 - 924762 + G 70 -2.2 -4.59773 | overlap 924750 CACCGCGTTGAGTGC TCCCGGTAGTCGGCTGGCGT TCGA ATTCGTGCCGGATACCGCGA TTTTTGCCGATGAGC JTY_0853 924108 - 925013 + | hypothetical protein JTY_0854 925847 - 925032 - | hypothetical protein TERM 476 927196 - 927250 + G 75 -9 -4.07568 | opp_overlap 927198 CGCGGCGGCCCAGAC CAGCGCGGTGCAGGCCGCGGCCGC GGATGAG GTGTCGGCGGCGATCGCTGCGCTG TTTTCCGCCCACGGG TERM 477 927253 - 927270 + G 75 -9.1 -4.08767 | GATCGCTGCGCTGTT TTCCGCC CACG GGCGGGA TTTTCAGGCGCTCAG TERM 478 928880 - 928918 + G 89 -18 -3.45571 | overlap 928872 GCCGTCACGGGAACC GGCGCCACCGGCGGGTCC GGT GGGGCCGGCGGTGGAGCC TTGCTGTTTGGGGCC TERM 479 929356 - 929405 + G 70 -13.6 -3.04398 | gap 3, overlap 929360 CGGCGGCAACGCGGG CTTGCTCGCCCCCGGTCTCGCCGGC GGT GCCGGCG-G--TGGCGGCGGGCAGG GTTTTGACACCGGCG TERM 480 929360 - 929406 + G 85 -12.9 -4.07568 | gap 2, overlap 929356 GGCAACGCGGGCTTG CTC-GCCC-CCGGTCTCGCCGGC GGT GCCGGCGGTGGCGGCGGGCAGGG TTTTGACACCGGCGG TERM 481 929516 - 929540 + G 74 -15 -3.05844 | gap 1, overlap 929518 ACGGGTGGGCCTGGG GC-GGCCGGCG GCGA CGCCGGCCTGC TGTTCGGCTCCGGCG TERM 482 929518 - 929537 + G 77 -16.4 -2.75074 | overlap 929516 GGGTGGGCCTGGGGC GGCCGGCG GCGA CGCCGGCC TGCTGTTCGGCTCCG PE_PGRS13 927089 - 929821 + | PE-PGRS family protein PE_PGRS14 932696 - 930048 - | PE-PGRS family protein TERM 483 931506 - 931469 - G 72 -13.3 -3.14211 | AGCCGCCGGCACCAA CGCCACCGGTCCCGCCG GTGC CGCCGGCACCGGTCGCA GCCCCACCAAGCCCG TERM 484 931707 - 931664 - G 93 -15.8 -4.11394 | opp_overlap 931682 AGTCGAGCGCGAAAA CGGTGCCCGAGGAACCGCCG GCAC CGCCGGCGCCGCCGGCACCG CCGTTAGTACCTGCG lpqQ 933164 - 933808 + | putative lipoprotein JTY_0858 935143 - 934421 - | hypothetical protein JTY_0859 936242 - 935214 - | hypothetical protein lpqR 936931 - 937713 + | putative lipoprotein JTY_0861 937800 - 938612 + | hypothetical protein TERM 485 938624 - 938640 + T 71 -13.7 -2.60075 | opp_overlap 938614 938618 938615, overlap 938623 ATAAACTCAGGCACA CGCGCGA GGC TCGCGCG GTTGGTTGCCGACGA pip 939540 - 938680 - | putative proline iminopeptidase JTY_0863 939816 - 940058 + | putative transmembrane protein JTY_0864 940335 - 941627 + | putative integral membrane protein JTY_0865 941611 - 942615 + | putative dehydrogenase TERM 486 942699 - 942742 + T 71 -10.8 -3.40522 | overlap 942706 CGAGCAGCCTCTGCC GCATCGCCTCGGCGACCGCG GCAG CTCGGTCGCTGACGCCGAGC TTCTCGTACAACCGT narL 943329 - 942679 - | putative nitrate/nitrite response transcriptional regulatory protein TERM 487 943300 - 943276 - G 82 -12.2 -3.90744 | gap 1, opp_overlap 943274 GCCCTCGCGAAATAA CG-GGTGGTCG TCGC CGACCACCACG CGCACTTTCTCCGGC TERM 488 944615 - 944625 + G 70 -2.4 -4.70319 | GGCTCGGGTGGATGC CGCC GGC GGAG TTTTGGTTTTCCTGG JTY_0867 943413 - 944690 + | putative two component sensor kinase JTY_0868 946417 - 944903 - | putative oxidase lpqS 946566 - 946958 + | putative lipoprotein cysK2 947161 - 948279 + | putative cysteine synthase A JTY_0871 948279 - 949538 + | putative integral membrane transport protein JTY_0872 949535 - 949867 + | putative transposase JTY_0873 950691 - 949864 - | short-chain dehydrogenase TERM 489 951086 - 951073 - g 74 -8.1 -4.1822 | CTGCAGCGCAACAAA TCGGC TCTG GCCGA CATCGGCGCACACCA TERM 490 951227 - 951273 + G 83 -13.1 -3.85817 | gap 2, opp_overlap 951239, overlap 951228 GGTTCGACGCCATGG GCG-TCGACGATATC-CCGGCGG TCT TCGCCGGCGAGATCGTCGACCGA TTTGTCGCGGCGCCT TERM 491 951228 - 951272 + G 79 -16.6 -2.91276 | gap 2, opp_overlap 951239, overlap 951227 GTTCGACGCCATGGG CG-TCGACGATATC-CCGGCGG TCT TCGCCGGCGAGATCGTCGACCG ATTTGTCGCGGCGCC fadD16 950782 - 951618 + | putative fatty-acid-CoA ligase pdc 953341 - 951659 - | putative pyruvate or indole-3-pyruvate decarboxylase JTY_0876 953406 - 953849 + | hypothetical protein TERM 492 954708 - 954728 + G 75 -9.6 -4.07885 | GATTTGCCAGCCGAA CCCGCGAC GAGTG GACGCGGG TTTTCGCCGGCACTG far 953855 - 954934 + | putative fatty-acid-CoA racemase JTY_0878 955047 - 955451 + | hypothetical protein JTY_0879 955479 - 955952 + | hypothetical protein JTY_0880 957142 - 955949 - | aminotransferase TERM 493 956397 - 956421 + g 82 -11.4 -4.08216 | ACCCCGGCGATGAGT TCGGCTGGGC CGCAA GCCCATCCGA TTTTCCAGCCGGTGC fadA 957299 - 958510 + | acyl-CoA acetyltransferase TERM 494 959214 - 959235 + G 85 -10.1 -4.17023 | opp_overlap 959198, overlap 959230 CCCGGCGGCACCCCG TCGTCGCCG GGTC TGGCGGCGA TTTTGCCGTCGTTCC TERM 495 960627 - 960647 + G 73 -13.9 -3.14132 | CGGACCCGCGAGCTG GCGGCCGCC TAC GGCGACCGC TTCCTGCCGCCGGAG fadB 958515 - 960677 + | putative fatty oxidation protein TERM 496 960689 - 960730 + T 100 -28.3 -2.78384 | gap 1, opp_overlap 960689 960696, overlap 960696 CTGAGCGCGAGCAGA CGTAAAAGCCCCCG-CACGC TCG GCGTGTCGGGGGCTTTTACG TCTGCTCGCGCAACC TERM 497 960730 - 960689 - T 100 -28.3 -2.79183 | gap 1, opp_overlap 960689 960696, overlap 960696 CTGAGCGCGAGCAGA CGTAAAAGCCCCCG-CACGC TCG GCGTGTCGGGGGCTTTTACG TCTGCTCGCGCAACC TERM 498 960723 - 960696 - T 100 -19.2 -4.24948 | gap 1, opp_overlap 960696 960689, overlap 960689 CGAGCAGACGTAAAA GCCCCCG-CACGC TCG GCGTGTCGGGGGC TTTTACGTCTGCTCG TERM 499 960696 - 960723 + T 100 -19.2 -4.24948 | gap 1, opp_overlap 960689 960696, overlap 960689 CGAGCAGACGTAAAA GCCCCCG-CACGC TCG GCGTGTCGGGGGC TTTTACGTCTGCTCG JTY_0883 962373 - 960745 - | putative DNA helicase TERM 500 960830 - 960814 - G 70 -2.2 -4.65895 | overlap 960815 CTGCTCAGCTAAAAA CCGC TGCCGGTGT GCGG CGTACTCGGCATCCA JTY_0884 964781 - 962511 - | hypothetical protein JTY_0885 964768 - 965049 + | hypothetical protein moaC2 965133 - 965561 + | molybdenum cofactor biosynthesis protein C mog 965558 - 966040 + | putative molybdopterin biosynthesis protein TERM 501 966312 - 966357 + G 74 -12.6 -3.56643 | gap 3, overlap 966313 CTTGCAGGTCGGGGA GGCCG-CC-CTGGTGG-CGGCGG TTG CCGCCGATCACCGGCGGGCGGCG TTTGGCACCTGTGCG TERM 502 966313 - 966356 + G 77 -16.1 -2.73771 | gap 3, overlap 966312 TTGCAGGTCGGGGAG GCCG-CC-CTGGTGG-CGGCGG TTG CCGCCGATCACCGGCGGGCGGC GTTTGGCACCTGTGC moaE2 966037 - 966462 + | putative molybdenum cofactor biosynthesis protein E2 rpfA 967703 - 966480 - | putative resuscitation-promoting factor TERM 503 966704 - 966730 + g 71 -9.3 -3.84246 | CCGGGCCGCCTGGAG CTGTGGCGGGC TGATC GCCCGGCGCGG TTTGCTCGTTCACCG moaD2 968429 - 968151 - | putative molybdenum cofactor biosynthesis protein D 2 moaA 969515 - 968433 - | molybdenum cofactor biosynthesis protein A JTY_0892 969901 - 969512 - | hypothetical protein TERM 504 969992 - 970019 + H 77 -12.6 -3.66784 | overlap 969994 GATCTTCAGATCGTC ATCGCGTCCCGC GCAG GCGGGACGCGTC TTCTGTTGCCAATCC TERM 505 969994 - 970017 + H 100 -19.6 -3.41292 | overlap 969992 TCTTCAGATCGTCAT CGCGTCCCGC GCAG GCGGGACGCG TCTTCTGTTGCCAAT cspB 970066 - 970473 + | putative cold shock-like protein B PE_PGRS15 972421 - 970592 - | PE-PGRS family protein TERM 506 971490 - 971460 - G 86 -18.2 -3.05816 | GCATTGCCGATGGAA GCGGCGCTGCCGCC GGC GCCGCCAGCGCCGC CATAGGCGCCCTCAC TERM 507 972076 - 972104 + g 76 -14.5 -3.18681 | overlap 972077 972102 CGTTGCCGATCAGGG GGCGCCCAAGCAG CGT CTGCGTGGGCGCG TTGATCACATTCAAC TERM 508 972077 - 972103 + g 85 -18 -2.50994 | overlap 972076 972102 GTTGCCGATCAGGGG GCGCCCAAGCAG CGT CTGCGTGGGCGC GTTGATCACATTCAA TERM 509 972559 - 972523 - H 100 -14.3 -4.70659 | opp_overlap 972526 CTTGACATGGAAAAA CGGCGGCCCCGACCCTG CCT CAGCGTCGCAGCCGTCG TTGGCGGCGAGCACC TERM 510 973164 - 973182 + G 81 -5.2 -4.72272 | CCTACCGCGGTGTGC GGCCGG CGCGATA TCGGCC TTTTTACTAACCGAA TERM 511 973854 - 973838 - g 71 -13.7 -2.8805 | ATGAGTTGCTACAGA TCCGCGG TGG CCGCGGA TACGAGACCGCCGAA fadE10 972682 - 974634 + | putative acyl-CoA dehydrogenase JTY_0896 975883 - 974723 - | hypothetical protein JTY_0897 976471 - 975983 - | hypothetical protein JTY_0898 978114 - 976468 - | putative transmembrane protein TERM 512 978824 - 978835 + G 72 -7.2 -4.2461 | opp_overlap 978816, overlap 978794 GACGAAACGCGTCTG CCGC GACT GCGG TTTCTTCCTGCCGCT JTY_0899 978252 - 979040 + | hypothetical protein PPE13 980377 - 979049 - | PPE family protein TERM 513 980195 - 980156 - G 100 -20.6 -2.95388 | overlap 980148 CAGCCAACTCAGATA CGGTGCGGCCGCGGCCGC CATC GCGGCCGCCGCCGGACCC TGCCACGCCGAACCC TERM 514 980568 - 980610 + r 71 -9 -3.7108 | opp_overlap 980560, overlap 980571 TCGAAATCCTGTCGC CAACCCCGACAGCCGGGTTC CGG GAAGCCGGGTGTCGCAGTGG TTTAGGTGTCGACGT JTY_0901 980930 - 980655 - | putative transmembrane protein JTY_0902 981108 - 981539 + | putative transcriptional regulatory protein JTY_0903 981536 - 982402 + | putative rRNA methyltransferase JTY_0904 982399 - 982683 + | putative transmembrane protein JTY_0905 983441 - 982680 - | hypothetical protein serC 984728 - 983598 - | phosphoserine aminotransferase JTY_0907 984936 - 985958 + | hypothetical protein fprB 985977 - 987704 + | putative NADPH:adrenodoxin oxidoreductase JTY_0909 988145 - 987687 - | hypothetical protein JTY_0910 989407 - 990879 + | hypothetical protein citA 992035 - 990914 - | citrate synthase II JTY_0912 994770 - 992122 - | putative transcriptional regulatory protein TERM 515 992560 - 992586 + g 70 -13.6 -3.07443 | TTCGGAGTGACTGCC GACCTCGCCGGC CAG GCCGGCGAGGAG TTCCATGGCATCTGG JTY_0913 995629 - 994772 - | putative transcriptional regulatory protein JTY_0914 996027 - 997514 + | putative monooxygenase JTY_0915 998469 - 997492 - | hypothetical protein JTY_0916 998698 - 999879 + | putative transcriptional regulatory protein JTY_0917 999956 - 1001473 + | hypothetical protein TERM 516 1002391 - 1002413 + G 86 -17.8 -3.06671 | overlap 1002358 GTCGACGGTTCGGCT GGTTGGCTCG TCG CGAGCCAACC TGTTCACCTCGATCT gltA 1001663 - 1002958 + | type II citrate synthase TERM 517 1002972 - 1003013 + T 81 -16.2 -2.78384 | opp_overlap 1002972 1002979, overlap 1002980 1002981 AGGCCGGCGAGCAGA CGCAAAAGCCCCCTAA-ACC GGCA GGTATTAGGGG-CTTTTGCG TCTGCTCGCCAGGCA TERM 518 1003013 - 1002972 - T 86 -18.1 -2.78463 | opp_overlap 1002972 1002980 1002981, overlap 1002979 AGGCCGGCGAGCAGA CGCAAAAGCCCCCTAAACC GGCA GGTATTAGGGGCTTTTGCG TCTGCTCGCCAGGCA TERM 519 1003006 - 1002979 - T 76 -7.6 -4.24948 | opp_overlap 1002972 1002980 1002981, overlap 1002972 CGAGCAGACGCAAAA GCCCCCTAAACC GGCA GGTATTAGGGGC TTTTGCGTCTGCTCG TERM 520 1002980 - 1003006 + T 71 -5.9 -4.24948 | gap 1, opp_overlap 1002979 1002972, overlap 1002972 1002981 GAGCAGACGCAAAAG CCCCCTAA-ACC GGCA GGTATTAGGGGC TTTTGCGTCTGCTCG JTY_0919 1004606 - 1002999 - | putative oxidoreductase JTY_0920 1004895 - 1004632 - | hypothetical protein ompA 1005003 - 1005983 + | putative outer membrane protein A JTY_0922 1005996 - 1006148 + | hypothetical protein JTY_0923 1006148 - 1006675 + | putative exported or membrane protein prrB 1008032 - 1006692 - | two component sensor histidine kinase prrA 1008753 - 1008043 - | two component response transcriptional regulatory protein TERM 521 1008860 - 1008819 - R 91 -20.5 -2.78384 | gap 1, opp_overlap 1008819 1008821 1008823 1008825, overlap 1008821 1008823 1008825 TGCTGGGCGAGCAGA CACAGAGTCGCATCAAAACC GCC GATTTTG-TGCGACTCTGTG TCTGCTCGCGGGGTG TERM 522 1008819 - 1008860 + r 86 -18.3 -2.78596 | gap 1, opp_overlap 1008819 1008821 1008823 1008825, overlap 1008821 1008823 1008825 TGCTGGGCGAGCAGA CACAGAGTCGCATCAAAACC GCC GATTTTG-TGCGACTCTGTG TCTGCTCGCGGGGTG TERM 523 1008858 - 1008821 - R 87 -17.3 -2.94099 | gap 1, opp_overlap 1008819 1008821 1008823 1008825, overlap 1008819 1008823 1008825 CTGGGCGAGCAGACA CAGAGTCGCATCAAAACC GCC GATTTTG-TGCGACTCTG TGTCTGCTCGCGGGG TERM 524 1008821 - 1008858 + r 79 -15.1 -2.94099 | gap 1, opp_overlap 1008821 1008819 1008823 1008825, overlap 1008819 1008823 1008825 CTGGGCGAGCAGACA CAGAGTCGCATCAAAACC GCC GATTTTG-TGCGACTCTG TGTCTGCTCGCGGGG TERM 525 1008856 - 1008823 - R 75 -14.1 -3.02471 | gap 1, opp_overlap 1008821 1008819 1008823 1008825, overlap 1008821 1008819 1008825 GGGCGAGCAGACACA GAGTCGCATCAAAACC GCC GATTTTG-TGCGACTC TGTGTCTGCTCGCGG accD3 1010371 - 1008884 - | putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta echA6 1010398 - 1011129 + | enoyl-CoA hydratase TERM 526 1011149 - 1011195 + G 73 -13.7 -3.09327 | gap 1 CATGGTGCGCCGAGC GCTACG-ACTGGCGGCCGGC ACCGCCTC GCTGGCCGCCGGCACGTGGC TGTTGCGTGCGCTGC JTY_0928 1011135 - 1012253 + | hypothetical protein JTY_0929 1012346 - 1013926 + | hypothetical protein ctpE 1013923 - 1016316 + | putative metal cation transporter ATPase P-type JTY_0931 1016873 - 1017052 + | hypothetical protein JTY_0932 1017058 - 1017492 + | hypothetical protein JTY_0933 1017590 - 1018363 + | hypothetical protein JTY_0934 1018428 - 1018877 + | putative transmembrane protein JTY_0935 1020917 - 1019409 - | putative dioxygenase TERM 527 1020701 - 1020675 - G 72 -13 -3.09516 | TTTTCCATCACGGAA GCCGACGACATG GAT CATGCCGTCGCC ATCGAAGGGGTGGTA JTY_0936 1022157 - 1020919 - | acetyl-CoA acetyltransferase TERM 528 1021327 - 1021359 + g 77 -11.1 -3.85698 | overlap 1021328 GTGCGGCAGTAGGTA GGGGGCCGAGTCGCC CTG GGCGACGCGGTCCAG TTTCTGCCGCAGACC TERM 529 1021328 - 1021358 + g 73 -14.6 -2.91276 | overlap 1021327 TGCGGCAGTAGGTAG GGGGCCGAGTCGCC CTG GGCGACGCGGTCCA GTTTCTGCCGCAGAC PPE14 1023521 - 1022250 - | PPE family protein TERM 530 1023444 - 1023411 - G 76 -14.5 -3.17075 | gap 1, overlap 1023395 1023393 CGCGGCGGAAGTCAA CTCCGCGGCCACACCG TCC CAG-GCGGCCGCGGCG GCTAGCATCGACTCC PE7 1023835 - 1023536 - | PE family protein TERM 531 1024670 - 1024692 + G 71 -14.8 -2.52516 | overlap 1024669 ACTACCTGCGGCCAC CGCGGTCACG CGG CGTGCCCGCG CTTACTGATGCGGCG betP 1024279 - 1026060 + | putative glycine betaine transport integral membrane protein JTY_0940 1026403 - 1026879 + | hypothetical protein JTY_0941 1026876 - 1027376 + | hypothetical protein JTY_0942 1029008 - 1027689 - | putative transposase TERM 532 1029086 - 1029124 + H 71 -8.1 -3.89524 | gap 1, opp_overlap 1029096, overlap 1029089 CCACTTACACCGAAT CAGCGATAGACCCCTCCG GCGG CGGGGGGGT-TGGCGGTG TTTGTGGCGTCCGGT TERM 533 1029665 - 1029698 + G 71 -13.9 -2.94099 | gap 1 CATCGGGATCGGCTG GCG-CGTTTCGGGGTG GAG CACCTCGAGGCGGCGC TGTCTGCTCAGGGCC JTY_0943 1029296 - 1029877 + | putative resolvase TERM 534 1030878 - 1030833 - g 87 -14.5 -3.77087 | overlap 1030834 CATCGAATACCCAAA CCCGGCCCCGCTCAAGGCGAC ACTC GTCGCCCGTCGCAGGGCCGGC CGAGAACTTTCCCGC TERM 535 1030877 - 1030834 - g 86 -18 -2.8577 | overlap 1030833 ATCGAATACCCAAAC CCGGCCCCGCTCAAGGCGAC ACTC GTCGCCCGTCGCAGGGCCGG CCGAGAACTTTCCCG JTY_0944 1029877 - 1031529 + | putative transposase JTY_0945 1032769 - 1031705 - | hypothetical protein mntH 1034056 - 1032770 - | manganese transport protein TERM 536 1033447 - 1033426 - G 72 -7.3 -4.17048 | gap 1, overlap 1033445 1033446 GCGCGGCCAAAAGAA CGCTCTC-GG TTC CCTGAAAGCG CGGTGCCAAACCGCC JTY_0947 1034825 - 1034088 - | divalent cation-transport integral membrane protein JTY_0948 1035978 - 1034902 - | hypothetical protein JTY_0949 1036823 - 1036032 - | short-chain dehydrogenase pstS3 1037095 - 1038207 + | periplasmic phosphate-binding lipoprotein pstC2 1038220 - 1039194 + | phosphate-transport integral membrane ABC transporter TERM 537 1039283 - 1039295 + G 79 -3.3 -5.08601 | opp_overlap 1039283 GCGGATCAAAAACAG CGTCG CGA CAACG TTTTTCTTCACCTCG TERM 538 1039826 - 1039850 + G 77 -10.7 -3.8211 | CGTCGCCCCGATCGC GATGCCGGGCA TCG TGTCAGGCATC TTGTTGTCCATCGCG pstA1 1039191 - 1040105 + | putative phosphate-transport integral membrane ABC transporter pknDb 1041221 - 1040112 - | hypothetical protein pknDa 1042107 - 1041232 - | transmembrane serine/threonine-protein kinase pstS2 1043241 - 1042129 - | periplasmic phosphate-binding lipoprotein TERM 539 1042238 - 1042188 - G 73 -14.2 -3.17194 | gap 2, opp_overlap 1042192, overlap 1042192 ATTTGGGCAACGGAA TG-GAGCCG-TATTGGTCCAGGCC TTCTT GGCCTGGACCAATCGCGGCTTGCA TAAACGCCCTTACCG TERM 540 1042192 - 1042233 + g 100 -21.8 -3.05463 | gap 1, opp_overlap 1042188 1042192 GGGCAACGGAATGGA GCCGT-ATTGGTCCAGGCC TTCTT GGCCTGGACCAATCGCGGC TTGCATAAACGCCCT TERM 541 1042233 - 1042192 - G 93 -19.6 -2.57013 | gap 1, opp_overlap 1042192, overlap 1042188 GGGCAACGGAATGGA GCCG-TATTGGTCCAGGCC TTCTT GGCCTGGACCAATCGCGGC TTGCATAAACGCCCT TERM 542 1043054 - 1043065 + g 74 -2.2 -4.78237 | TAGGCATAGACGAAC TGCT CCAT GGCA TTTTCTTGTGCGGTC pstBa 1043457 - 1043672 + | phosphate-transport protein ABC transporter TERM 543 1044127 - 1044159 + G 70 -10.6 -3.61398 | overlap 1044129 ACCCATAACCTTGCC CA-GGCCGCCCGCATC AGC GAC-CGGGCGGCCCTG TTCTTCGACGGCAGG pstBb 1043647 - 1044288 + | phosphate-transport protein ABC transporter pstS1 1044309 - 1045433 + | periplasmic phosphate-binding lipoprotein pstC1 1045493 - 1046509 + | phosphate-transport integral membrane ABC transporter pstA2 1046511 - 1047416 + | phosphate-transport integral membrane ABC transporter JTY_0961 1048214 - 1047393 - | hypothetical protein TERM 544 1049594 - 1049540 - g 71 -14.2 -2.80816 | overlap 1049547 CCGGCACTTACGACA CCGAGAAGTTCCACGATGACCCGCAC ACG GGGGAGGTCATCGTGAATCTGCACGG CGGCCGGATCTCTGG JTY_0962 1048330 - 1050609 + | putative ATP dependant DNA ligase TERM 545 1051579 - 1051598 + G 70 -10.7 -3.53224 | GGCGCGGGGTCAACC CGGCACC GACGCG GGTGCCG TTTACCCGCGGGCTG JTY_0963 1050606 - 1052540 + | putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase JTY_0964 1053653 - 1052787 - | putative oxidoreductase JTY_0965 1054511 - 1053738 - | hypothetical protein TERM 546 1054122 - 1054157 + g 100 -11.1 -4.66609 | gap 1, opp_overlap 1054120 1054121 CGAACGCTTGAAATT GCGGCGCGCGA-GCCG ACCGA TGGCCTTGCTCGCCGC TTTTTCGGTCGGGTA JTY_0966 1054554 - 1054832 + | hypothetical protein JTY_0967 1055930 - 1054890 - | putative monooxygenase JTY_0968 1055959 - 1056435 + | putative formamidopyrimidine-DNA glycosylase JTY_0969 1056441 - 1057202 + | putative short-chain type dehydrogenase/reductase pgi 1058879 - 1057218 - | putative glucose-6-phosphate isomerase TERM 547 1057673 - 1057659 - G 70 -10 -3.72893 | overlap 1057669 1057670 GAGGGGTTGAGCAAA GCCGAT GAA ATCGGC TGGCACCAGCCGGGT TERM 548 1058104 - 1058089 - G 73 -4 -4.67234 | gap 1, opp_overlap 1058089 ACCCAATCCCAAAAA CCGAACA TGT TGT-CGG TGTTGATGCCGAAGT TERM 549 1058175 - 1058158 - G 79 -8.3 -4.39426 | overlap 1058159 GACACCGCGACAAAA TGCCGCG ACAC CGCGGCG TCGCCCAGCGCATCG TERM 550 1058952 - 1058966 + r 74 -9.2 -3.89055 | overlap 1058964 TTTAGTTATCGTGCT CGGCGG CAC TCGCCG TTTGTCGCGGTATCT TERM 551 1059477 - 1059449 - R 91 -16.1 -3.66784 | CCAGTTGGAATAGAA CTCGCCATGCC ACCGGTG GGCATGGCGAG CGACAGACCGGTCTG JTY_0971 1059724 - 1059494 - | putative mycolyl transferase JTY_0972 1060157 - 1059840 - | hypothetical protein TERM 552 1060216 - 1060184 - H 74 -14.2 -2.53249 | gap 1, overlap 1060183 1060181 1060179 1060186 CCTCACACAAGAGAC GAGCCCCG-AATCCG GAAG CGGACCACGGGGCTC TGCGAAAGCAGCTAG TERM 553 1060294 - 1060267 - H 74 -2.6 -4.84359 | gap 1 GTACCCGTAGAAAAA TCGGCGC-TGCGC GTT GAGCACGAACCGA GTGTGCCATCAACGG uvrD1 1060454 - 1062769 + | putative ATP dependent dna helicase JTY_0974 1063848 - 1062850 - | hypothetical protein sucC 1064158 - 1065321 + | succinyl-CoA synthetase subunit beta sucD 1065334 - 1066245 + | succinyl-CoA synthetase subunit alpha JTY_0977 1067099 - 1066242 - | putative oxidoreductase TERM 554 1068164 - 1068127 - g 70 -10.5 -3.71794 | gap 1 AGTCAACTATTCAAA CCCCAGCGGGGG-CGA GCAGTCG TCGTCCCCCGGGGGGG CGCCGGTCTAACCGG JTY_0978 1067264 - 1068175 + | putative transmembrane protein TERM 555 1069113 - 1069159 + G 85 -9.9 -4.17556 | gap 1 TCATTGTGGGTGCTT CGTC-GGGTGTGGCGGTCGGTC AGCA GTGCGCCCGCCGCGCCCTGCCG TTTGTTGCGGCTATG JTY_0979 1068215 - 1069582 + | putative integral membrane protein TERM 556 1069799 - 1069827 + G 100 -24.7 -3.2794 | ACTCGATGCCGCTGT CGGCGACTACCCG GCA CGGGTAGTCGCCG TTGGTGTGGATCGCG purN 1069698 - 1070345 + | phosphoribosylglycinamide formyltransferase purH 1070342 - 1071913 + | phosphoribosylaminoimidazolecarboxamide formyltransferase TERM 557 1072471 - 1072447 - g 74 -15.7 -2.62616 | overlap 1072427 CCACCCCCGACACCA GCGTCGCCGAC CTG GTCGGCGACGT CGACCCGATCAAGGT TERM 558 1072970 - 1072951 - g 72 -11.4 -3.54424 | gap 1, opp_overlap 1072963 TCGCAGCGGCCGAAA CCGTGGCGG CTG CCGCC-CGG CACCGCGGGGCGGTG JTY_0982 1072020 - 1073399 + | putative magnesium chelatase JTY_0983 1073392 - 1075410 + | hypothetical protein TERM 559 1075588 - 1075605 + G 70 -9.8 -3.63569 | CCGAGGCTTCTCGCC GCGCCG ACAATC CGGCGC TTCTTGGGGACTTGC JTY_0984 1075464 - 1075685 + | hypothetical protein, antitoxin JTY_0985 1075682 - 1076065 + | hypothetical protein JTY_0986 1076211 - 1076558 + | integral membrane protein lprP 1077251 - 1076577 - | putative lipoprotein TERM 560 1077105 - 1077118 + g 75 -6.7 -4.37092 | TGTCTCAAGATCGGG TCGTC CGTT GACGA TTTTCTGCCGGCGGT JTY_0988 1078234 - 1077434 - | hypothetical protein JTY_0989 1078815 - 1078333 - | hypothetical protein JTY_0990 1079334 - 1078915 - | hypothetical protein TERM 561 1078985 - 1078968 - G 83 -14.1 -3.85698 | opp_overlap 1078967 1078966 CGCCTGTTGGATAAA CCGCGGC CAGT GCCGCGG CGTTGTGTTCCTCCA JTY_0991 1079972 - 1079370 - | hypothetical protein TERM 562 1080147 - 1080137 - g 70 -8.2 -3.94188 | opp_overlap 1080142, overlap 1080138 ATTGACCGCAAAGAA GCGC GCG GCGC TGAACCGGCTGAAGA JTY_0992 1080111 - 1080470 + | hypothetical protein TERM 563 1080475 - 1080489 + F 74 -9.2 -3.85698 | GCAACATGTGACGAG CGCCGG ACT CCGGTG TTTCTCGGGACAACG JTY_0993 1080527 - 1080823 + | hypothetical protein TERM 564 1082299 - 1082263 - g 72 -13 -3.21276 | gap 1, opp_overlap 1082263, overlap 1082261 1082264 TGGTGTTCGACAAGA CCGG-CACCCTCACCCG CGCC CGGATGCGGGTGACCGA TGTGATTGCCGGCCA ctpV 1080879 - 1083191 + | putative metal cation transporter P-type ATPase TERM 565 1083356 - 1083388 + G 90 -6.2 -5.1356 | gap 1, overlap 1083359 1083360 ATGGCCTGGCCGTGG GGCGCGCGGGTTCCG ACGA CGGGACCTGCG-GTA TTTTTCTTGCTGGCG TERM 566 1083359 - 1083386 + G 89 -11.2 -4.19587 | overlap 1083356 1083360 GCCTGGCCGTGGGGC GCGCGGGTTCCG ACGA CGGGACCTGCGG TATTTTTCTTGCTGG TERM 567 1083360 - 1083385 + G 76 -14.7 -3.10668 | overlap 1083359 1083356 CCTGGCCGTGGGGCG CGCGGGTTCCG ACGA CGGGACCTGCG GTATTTTTCTTGCTG JTY_0995 1083188 - 1083820 + | putative integral membrane protein echA7 1084720 - 1083911 - | enoyl-CoA hydratase fadE12 1085886 - 1084720 - | putative acyl-CoA dehydrogenase TERM 568 1085750 - 1085732 - G 79 -3.1 -5.03314 | TTCACCCCCAAAAAA CCGAG TTTGCCTGC CTCGG CCCATAACTCGCTGG accA2 1087886 - 1085883 - | putative acetyl-/propionyl-coenzyme A carboxylase alpha chain subunit alpha accD2 1089481 - 1087892 - | putative acetyl-/propionyl-coa carboxylase subunit beta fadE13 1090632 - 1089484 - | putative acyl-CoA dehydrogenase JTY_1001 1092311 - 1090629 - | hypothetical protein TERM 569 1092625 - 1092671 + GH 86 -12.3 -4.11216 | gap 2, opp_overlap 1092619, overlap 1092614 1092619 1092627 TCCGAACGACGGCGT TGGCGCC-CG-CCGCCGCCGA CGAGGTT TCGGCGGCGATCGCGGCGCTG TTTTCCAGCTACGCG TERM 570 1092627 - 1092669 + GH 85 -14.9 -3.65542 | gap 2, opp_overlap 1092619, overlap 1092614 1092619 1092625 CGAACGACGGCGTTG GCGCC-CG-CCGCCGCCGA CGAGGTT TCGGCGGCGATCGCGGCGC TGTTTTCCAGCTACG TERM 571 1093915 - 1093885 - gH 77 -13.8 -3.33361 | overlap 1093881 TAGGAACCAGAGGAA CCGGCGGCGAAGGC GGT GCCGGCGGCGCCGG TGGAGACGGCGGGCA PE_PGRS16 1092510 - 1094003 + | PE-PGRS family protein TERM 572 1094128 - 1094178 + GT 72 -12.2 -3.32844 | GGTCGCGGGGGGGAC TCGGGCCGCGGCGGCGACGGCGGC AAC GCCGGCCACGGCGGCGCCGCCCAA TTCTCCGGTCGCGGC TERM 573 1094243 - 1094285 + GT 71 -11 -3.53012 | overlap 1094244 GCGGCAACGCCGGTG GCGCCGGCACCGGTGGCACC GCG GGCTCCGGCGGTGCCGGAGG TTTCGGCGGCAACGG TERM 574 1094244 - 1094284 + GT 75 -14.5 -2.71712 | overlap 1094243 CGGCAACGCCGGTGG CGCCGGCACCGGTGGCACC GCG GGCTCCGGCGGTGCCGGAG GTTTCGGCGGCAACG TERM 575 1094389 - 1094373 - gT 76 -13.7 -3.14344 | overlap 1094355 CACGTTCGGCACCAA CGGTGCC GGC GGCACCG GCGGGCTCGGCACCC TERM 576 1094499 - 1094529 + GT 93 -19.2 -2.70932 | opp_overlap 1094507, overlap 1094501 1094505 CGTACCGCTGCAGCT GGTGAATACCACCG AGC CGGTGGTATTCATC TCCTTAAACGGCGGC TERM 577 1094501 - 1094527 + GT 90 -18.2 -2.90075 | opp_overlap 1094507, overlap 1094499 1094505 TACCGCTGCAGCTGG TGAATACCACCG AGC CGGTGGTATTCA TCTCCTTAAACGGCG TERM 578 1094505 - 1094523 + GT 74 -13.2 -3.32647 | opp_overlap 1094507, overlap 1094501 1094499 GCTGCAGCTGGTGAA TACCACCG AGC CGGTGGTA TTCATCTCCTTAAAC PE_PGRS16 1093960 - 1095282 + | PE-PGRS family protein PE_PGRS17 1096506 - 1095499 - | PE-PGRS family protein TERM 579 1095613 - 1095649 + g 89 -18.1 -3.26947 | overlap 1095615 GATGGGGGAGCCGGT GACGGTGTTGGTGGTCG GGT CGATCACCGACACCGTG TTGCTGTCGAAGTTG TERM 580 1095615 - 1095647 + g 100 -20.7 -3.1978 | overlap 1095613 TGGGGGAGCCGGTGA CGGTGTTGGTGGTCG GGT CGATCACCGACACCG TGTTGCTGTCGAAGT JTY_1005 1097014 - 1096820 - | hypothetical protein TERM 581 1096905 - 1096943 + g 72 -14.4 -3.02829 | opp_overlap 1096889 1096899 GTGAACTGACGGTCA CGCCCGGGCCCAACCCCG GCC CGGAATTGGGCCGGGCCG TCTTCAACCGGTATC rpmF 1097036 - 1097209 + | 50S ribosomal protein L32 PE_PGRS18 1098601 - 1097228 - | PE-PGRS family protein TERM 582 1097378 - 1097414 + g 73 -13.7 -3.17688 | overlap 1097380 1097399 GATGGGGGAGCCGGT GACGGTGTTGGTGGCCG GGT CGATCACCGACACCGTG TTGCTGAACTGGTTG TERM 583 1097380 - 1097412 + g 81 -16.3 -3.1478 | overlap 1097378 1097399 TGGGGGAGCCGGTGA CGGTGTTGGTGGCCG GGT CGATCACCGACACCG TGTTGCTGAACTGGT TERM 584 1097501 - 1097537 + g 80 -15.9 -3.26947 | overlap 1097471 1097470 1097473 1097503 GGGGATGGAGCCGGT GACGGTGTTGGTGTTCG GGT CGATCACCGACACCGTG TTGCTGTCGAAGTTG TERM 585 1097503 - 1097535 + g 90 -18.5 -3.1978 | overlap 1097471 1097470 1097473 1097501 GGATGGAGCCGGTGA CGGTGTTGGTGTTCG GGT CGATCACCGACACCG TGTTGCTGTCGAAGT TERM 586 1097627 - 1097663 + g 78 -15.9 -3.17688 | overlap 1097601 1097629 GGTGATGGAGCCGGT GACGGTGTTGGTGACCG GGT CGATCACCGACACCGTG TTGCTGCCCTGGTTG TERM 587 1097629 - 1097661 + g 90 -18.5 -3.1478 | overlap 1097601 1097627 TGATGGAGCCGGTGA CGGTGTTGGTGACCG GGT CGATCACCGACACCG TGTTGCTGCCCTGGT TERM 588 1098481 - 1098522 + g 72 -12.9 -3.13403 | overlap 1098472 1098479 CCTCGTCTTGGGCGG CGGCCAACACCTGGGTGGT CGCC GCCGCCGCGGTGTTGGCGG TGTTGATCGCCGAGC mprA 1098966 - 1099658 + | mycobacterial persistence regulator mprB 1099658 - 1101172 + | putative two component sensor kinase JTY_1010 1101216 - 1102610 + | putative serine protease moaB2 1102610 - 1103155 + | putative pterin-4-alpha-carbinolamine dehydratase mscL 1103630 - 1103175 - | large-conductance mechanosensitive channel TERM 589 1103415 - 1103397 - G 77 -3.9 -4.77036 | gap 1 CGCGATCAGGAAAAA GTTGATCG CTGC CGA-CAAC AAGACGTTCAAGTCA TERM 590 1104219 - 1104185 - g 70 -4.2 -4.43844 | gap 1, opp_overlap 1104165 CTATCACTCAGAAAA CCGAGCGAGACCGGA CGTTGT TCCGG-CGCGATCAG ATTGGCATCGTCTTT TERM 591 1104366 - 1104352 - g 74 -5.6 -4.57073 | GACCTTCTCGAAAAA GTGGGC ATG GCCGAC CGTGAACGCACCTTT JTY_1013 1103953 - 1104699 + | putative adhesion component transport ATP-binding protein ABC transporter TERM 592 1104746 - 1104763 + G 74 -10.5 -3.77846 | CGCACGGCGTGGCGT CGGCTGC GTCA GCGGCCG TTTCAATATATTCTG TERM 593 1105970 - 1105990 + G 73 -9.7 -3.98204 | overlap 1105959 1105967 ATGCTGTGGTTGCCG GGCAACAAC CTG GTTGTGGCC TTTGTCGGTCTCTTT TERM 594 1106616 - 1106627 + G 70 -3.6 -4.55287 | overlap 1106598 GGCCACAAACGTTCC CCGT TCTG GCGG TTTTCTCTGACTACA TERM 595 1106888 - 1106901 + G 81 -8.1 -4.66318 | GCGTTGCAACTGGTG GCCAC GGTG GTGGC TTTTATTGGCGTACT JTY_1014 1104692 - 1107259 + | putative adhesion component transport transmembrane protein ABC transporter JTY_1015 1107266 - 1108426 + | hypothetical protein grcC2 1109532 - 1108555 - | putative polyprenyl-diphosphate synthase JTY_1017 1110249 - 1109593 - | hypothetical protein TERM 596 1109970 - 1110015 + g 70 -2.3 -4.58395 | gap 1 TCGAACCCACCACTG CGTCCAGGTCAGCTTGCGACCC GTC GGGAAGCGTGGTGGCC-GAACG TTTTTCCAGCCTGAC JTY_1018 1110654 - 1110322 - | hypothetical serine rich protein JTY_1019 1111321 - 1110728 - | hypothetical protein galU 1111422 - 1112342 + | putative UTP--glucose-1-phosphate uridylyltransferase moeA1 1112419 - 1113699 + | putative molybdopterin biosynthesis protein rimJ 1113762 - 1114373 + | putative ribosomal-protein-alanine acetyltransferase JTY_1023 1114534 - 1115610 + | putative transmembrane protein JTY_1024 1115784 - 1116014 + | hypothetical protein TERM 597 1116089 - 1116101 + G 75 -9.1 -4.11394 | opp_overlap 1116088 GCCATTCCACACGAT GGCGA CTA TCGCC TTTTCCAGGTCGACT JTY_1025 1116011 - 1116262 + | hypothetical protein TERM 598 1116581 - 1116559 - g 76 -6.2 -4.56978 | CGCCGAAACAACAAA CAGCATCGAA TGT TTCGTCGCCG AATGGCACCATGCGG JTY_1026 1116443 - 1116874 + | hypothetical protein TERM 599 1117198 - 1117166 - g 83 -15.6 -3.53444 | gap 1, opp_overlap 1117193 TGATCGTCGGCGAAA TCGCGCTGCTGCGCG ATAG CCCGC-GCAGCGCGA CGGTCACCACCATCG JTY_1027 1116898 - 1117899 + | hypothetical protein JTY_1028 1117917 - 1118675 + | hypothetical protein JTY_1029 1119298 - 1118681 - | hypothetical protein TERM 600 1119022 - 1119056 + g 72 -13.5 -3.10796 | AGATGTCGTTGAGCC GCCGGCGCATCCGCG CCAGC TGCGGATGCGGCGGA TCTTCGATGGTCAGG arcA 1119335 - 1120543 + | arginine deiminase JTY_1031 1122089 - 1120578 - | hypothetical protein TERM 601 1120968 - 1120912 - G 73 -13 -3.3353 | overlap 1120908 CGGCGCACAAACATA CGCCAC-CCCGCGTATGCCAGGACTGGC ACC GCCAGCCACCACAT-CGCGGGCGTGCCG ACCAGCATCTCGGCC TERM 602 1122594 - 1122652 + G 77 -5.8 -4.65916 | gap 1, overlap 1122602 1122603 GGGTTTCGCCCCGCG CAAGGGTGCGGCGCGCC-GGGCCTG GCTGGCCGAA CTGGCCGAGGAGCGGCGCACCTGTG TTTTCTTCGAATCCC TERM 603 1122603 - 1122648 + G 70 -11 -3.55261 | gap 1, overlap 1122602 1122594 CCCGCGCAAGGGTGC GGCGCGCCGGGCCT-GGCTGG CCGAA CTGGCCGAGGAGCGGCGCACC TGTGTTTTCTTCGAA JTY_1032 1122172 - 1123029 + | hypothetical protein JTY_1033 1124298 - 1123039 - | hypothetical protein TERM 604 1124066 - 1124023 - G 73 -13 -3.33696 | gap 1, opp_overlap 1124055 CGGCCGCGGAACCAA TCCCGGCG-CGATCGTGTCGG CGA CCGGCTCGAACGGCGCCGGCA CCGCGTGCTCCGCTG pabB 1125808 - 1124372 - | para-aminobenzoate synthase component I TERM 605 1127311 - 1127293 - g 74 -14.6 -3.05844 | CGGTGGACCTGAAGA CGCTGGTC TCC GACCAGCG CGGCGATCGCAGCAG JTY_1035 1125864 - 1127567 + | hypothetical protein metS 1129153 - 1127594 - | methionyl-tRNA synthetase TERM 606 1128350 - 1128332 - G 79 -4.4 -4.8048 | overlap 1128333 1128346 GGCTGACATCAAAAA CGCCGGCC AAT AGACGGCA TGAAACCTGATGATG tatD 1129239 - 1130033 + | putative deoxyribonuclease TERM 607 1130115 - 1130141 + F 82 -5.8 -4.86293 | TTGTGATCGAACGGG TGGGGCCTCT AGGTTTC GGAGGGCCCA TTTTGCTTTTTGTTC rpfB 1130241 - 1131329 + | putative resuscitation-promoting factor ksgA 1131302 - 1132255 + | dimethyladenosine transferase ispE 1132341 - 1133261 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase JTY_1041 1133258 - 1133572 + | hypothetical protein pks16 1133776 - 1135410 + | acyl-CoA synthetase TERM 608 1135425 - 1135466 + T 90 -20.3 -2.78463 | opp_overlap 1135425 1135432, overlap 1135432 AGGCCGCCGAGCAGA CGCAAAATCCCCTCGACAC GCCG GTTGCGAGGGGATTTTGCG TCTGCTCACGCGGGT TERM 609 1135466 - 1135425 - T 90 -20.3 -2.78463 | opp_overlap 1135425 1135432, overlap 1135432 AGGCCGCCGAGCAGA CGCAAAATCCCCTCGACAC GCCG GTTGCGAGGGGATTTTGCG TCTGCTCACGCGGGT TERM 610 1135459 - 1135432 - T 85 -9.8 -4.24948 | opp_overlap 1135425 1135432, overlap 1135425 CGAGCAGACGCAAAA TCCCCTCGACAC GCCG GTTGCGAGGGGA TTTTGCGTCTGCTCA TERM 611 1135432 - 1135459 + T 85 -9.8 -4.24948 | opp_overlap 1135432 1135425, overlap 1135425 CGAGCAGACGCAAAA TCCCCTCGACAC GCCG GTTGCGAGGGGA TTTTGCGTCTGCTCA pth 1136059 - 1135484 - | peptidyl-tRNA hydrolase TERM 612 1135645 - 1135616 - G 74 -7.8 -4.1891 | GTTCTCCAACACAAA CGC-CGCCGGGTCC TTGC GG-CCGGGCGGGCG GCCGATCCCGATACG rplY 1136719 - 1136072 - | 50S ribosomal protein L25 lpqT 1137611 - 1136853 - | putative lipoprotein TERM 613 1137381 - 1137415 + g 78 -14.3 -3.59315 | gap 1 CAGGTCGGTCAGGCT GC-TCGGTGCCACCGG CTCT CCGGTGACGCCGACGC TTTCCAGATACTTCC prsA 1138627 - 1137647 - | ribose-phosphate pyrophosphokinase glmU 1140206 - 1138719 - | putative UDP-N-acetylglucosamine pyrophosphorylase TERM 614 1140460 - 1140436 - H 82 -11.3 -4.08692 | overlap 1140425 1140424 TAAGGCGCCGGAAAA CCCGACGCGGG TGA CGCGCGCCAGG ATGACGGGGACCGAG JTY_1048 1140461 - 1141054 + | putative transcriptional regulatory protein mfd 1141113 - 1144817 + | putative transcription-repair coupling factor JTY_1050 1144817 - 1145794 + | nucleoside triphosphate pyrophosphohydrolase TERM 615 1145941 - 1145969 + G 70 -6.1 -4.25104 | gap 2 GACCGCGATGCTGTT GGCGTCGAGCTGC ACTTG GCAGCT-GA-GCC TTTTCATCCCCGACG lpqU 1145882 - 1146613 + | putative lipoprotein eno 1146710 - 1147999 + | phosphopyruvate hydratase TERM 616 1148223 - 1148268 + G 77 -13.1 -3.52896 | gap 1, opp_overlap 1148213 1148225 GAGAAGCGCTCCGAA CAGCGGCTGGGGTTCACCGCGC GGC GCGCAGCGATCCTC-GCCGCGG TTGTATGCGTGCTGA TERM 617 1148266 - 1148225 - g 79 -16.5 -3.02461 | gap 1, opp_overlap 1148223, overlap 1148213 GAAGCGCTCCGAACA GCGGCTGGGGTTCACCGCGC GGC GCGCAGCGATCCTC-GCCGC GGTTGTATGCGTGCT JTY_1053 1148004 - 1148690 + | hypothetical protein JTY_1054 1148707 - 1149174 + | hypothetical protein JTY_1055 1149165 - 1150124 + | hypothetical protein kdpE 1151253 - 1150573 - | putative transcriptional regulatory protein kdpD 1153832 - 1151250 - | putative sensor protein kdpF 1154066 - 1154158 + | hypothetical protein TERM 618 1154282 - 1154268 - g 71 -2.7 -4.63527 | opp_overlap 1154267 1154269, overlap 1154269 CGACGAGGCCAAAAA GCCCG GCGAT CGGGT GTTTGGGCCGATCGA kdpA 1154158 - 1155873 + | potassium-transporting ATPase subunit A kdpB 1155870 - 1157999 + | potassium-transporting ATPase subunit B kdpC 1157999 - 1158568 + | putative potassium-transporting ATPase C chain trcS 1160101 - 1158572 - | two component sensor histidine kinase trcR 1160882 - 1160109 - | two component transcriptional regulator JTY_1064 1161453 - 1161064 - | putative transposase TERM 619 1161370 - 1161391 + g 81 -8.6 -4.56597 | GTCGGCGGTGACGGT GCGCGGCG TGCGTC CGGCGCGC TTTTTCACCCACGCC JTY_1065 1162207 - 1161521 - | putative transposase JTY_1066 1162579 - 1162241 - | putative IS1560 transposase TERM 620 1162549 - 1162502 - G 77 -10.8 -3.8901 | gap 1, opp_overlap 1162507, overlap 1162504 1162505 1162507 GCCTAAAGTACGAAA CACGATGGCCTCAAT-CCCTT CCGCAAC AAGGGCATTGAGGCCATCTTC CCAGTTCAGCACCAT TERM 621 1162547 - 1162504 - G 77 -13.4 -3.52909 | gap 1, opp_overlap 1162507, overlap 1162502 1162505 1162507 CTAAAGTACGAAACA CGATGGCCTCAAT-CCCTT CCGCAAC AAGGGCATTGAGGCCATCT TCCCAGTTCAGCACC TERM 622 1162546 - 1162505 - G 80 -16.9 -2.71022 | gap 1, opp_overlap 1162507, overlap 1162504 1162502 1162507 TAAAGTACGAAACAC GATGGCCTCAAT-CCCTT CCGCAAC AAGGGCATTGAGGCCATC TTCCCAGTTCAGCAC TERM 623 1162544 - 1162507 - G 71 -13.7 -2.88617 | gap 1, opp_overlap 1162507, overlap 1162505 1162504 1162502 AAGTACGAAACACGA TGGCCTCAAT-CCCTT CCGCAAC AAGGGCATTGAGGCCA TCTTCCCAGTTCAGC TERM 624 1162507 - 1162544 + g 72 -13.7 -3.06261 | gap 1, opp_overlap 1162507 1162505 1162504 1162502 AAGTACGAAACACGA TGGCCTCAAT-CCCTT CCGCAAC AAGGGCATTGAGGCCA TCTTCCCAGTTCAGC TERM 625 1162660 - 1162623 - R 100 -26.5 -3.48593 | opp_overlap 1162623 1162626, overlap 1162626 TAGTCGTTCAGATAA CAACGTGGCCACACACC AACC GGTGTGCGGCCACGTTG TAATTGACGGCGCGG TERM 626 1162623 - 1162660 + r 100 -24.3 -2.70932 | opp_overlap 1162623 1162626, overlap 1162626 TAGTCGTTCAGATAA CAACGTGGCCACACACC AACC GGTGTGCGGCCACGTTG TAATTGACGGCGCGG TERM 627 1162657 - 1162626 - R 100 -22.4 -3.88232 | opp_overlap 1162623 1162626, overlap 1162623 TCGTTCAGATAACAA CGTGGCCACACACC AACC GGTGTGCGGCCACG TTGTAATTGACGGCG TERM 628 1162626 - 1162657 + r 100 -20.2 -3.50853 | opp_overlap 1162626 1162623, overlap 1162623 TCGTTCAGATAACAA CGTGGCCACACACC AACC GGTGTGCGGCCACG TTGTAATTGACGGCG esxI 1162974 - 1162690 - | putative EsaT-6 like protein 1 esxJ 1163297 - 1163001 - | putative EsaT-6 like protein 2 PPE15 1164618 - 1163443 - | PPE family protein TERM 629 1164063 - 1164093 + g 87 -14.7 -3.81951 | gap 1 CGGCAGCCGAGCCGA CCGCGGCGGACTGG GCGG CCAGCCCGCC-CGG TTTGGTGGTCTGCGA PE8 1165522 - 1164695 - | PE family protein JTY_1072 1167645 - 1167238 - | putative IS like-2 transposase JTY_1073 1168953 - 1167928 - | hypothetical protein JTY_1074 1169200 - 1169823 + | hypothetical protein JTY_1075 1169820 - 1170701 + | hypothetical protein JTY_1076 1171376 - 1170783 - | hypothetical protein JTY_1077 1171571 - 1172818 + | putative IS1081 transposase JTY_1078 1174301 - 1173186 - | hypothetical protein TERM 630 1173597 - 1173587 - G 75 -6.8 -4.33928 | CAGTCGAAATAGAAA TCGG CGA CCGA AGCTTGTCTGCTGCC TERM 631 1173686 - 1173699 + g 95 -5.9 -5.40072 | overlap 1173669 1173687 CGCGGGCAGTGGCAC TGGCC AGAT GGCCG TTTTTTTCGAGAAAC TERM 632 1173822 - 1173869 + g 79 -11.8 -3.84825 | gap 1, opp_overlap 1173812 ACATACGGCAAGTGT GGCGCGGCGCCAGCCTATGCGCG CGT CGAGTG-GGGCAGGTGGCGCGCC TTTCGTCTCGATCAC JTY_1079 1174534 - 1174980 + | putative transcriptional repressor protein JTY_1080 1175028 - 1175933 + | putative oxidoreductase JTY_1081 1176847 - 1176092 - | hypothetical protein JTY_1083 1178433 - 1178158 - | hypothetical protein JTY_1082 1177870 - 1178259 + | hypothetical protein JTY_1084 1179075 - 1179389 + | putative integrase JTY_1085 1179386 - 1179520 + | putative integrase JTY_1086 1179775 - 1180539 + | hypothetical protein TERM 633 1181741 - 1181710 - g 83 -15.2 -3.73647 | gap 1 GGTAGTGACCAACAA CGGCACCGAC-ACCG TCT CGGTCGTCGGCACCG ACACCTGCCGGGTCA JTY_1087 1181543 - 1182724 + | hypothetical protein TERM 634 1182740 - 1182751 + F 70 -7.2 -3.99806 | CTCGAACGCGCTTCT CGGG GGAA CCCG TTTCTCATGACTTCT fadD14 1182831 - 1184462 + | acyl-CoA synthetase TERM 635 1184518 - 1184477 - f 72 -13.9 -2.78463 | gap 1, opp_overlap 1184477 1184485 1184486, overlap 1184484 1184485 ACCCGCGCGAGCAGA CGCAAAATCGCCCATTTTCG TGT CGAAA-TGGGGGCTTTTGCG TCTGCTCGCGGGTAG TERM 636 1184477 - 1184518 + F 72 -13.9 -2.78816 | gap 1, opp_overlap 1184477 1184484 1184485, overlap 1184485 1184486 ACCCGCGCGAGCAGA CGCAAAATCGCCCATTTTCG TGT CGAAA-TGGGGGCTTTTGCG TCTGCTCGCGGGTAG JTY_1089 1184538 - 1185602 + | hypothetical protein TERM 637 1185724 - 1185748 + G 74 -7.7 -4.1711 | overlap 1185725 1185727 GATGCGTTCGGTGGC ACGCTGGCGGC AGC GCTGCCGGTGA TTTGTTCGCACTGGT JTY_1090 1185655 - 1186128 + | hypothetical protein JTY_1091 1186162 - 1187025 + | hypothetical protein TERM 638 1187756 - 1187778 + G 70 -11.2 -3.53012 | overlap 1187754 GTGTTTGCCGTGTTC GCCGACGACG ACT CGTTGGCGGC TTTCGGGCCCAACCC JTY_1092 1187030 - 1187887 + | hypothetical protein JTY_1093 1188970 - 1187888 - | hypothetical protein lpqV 1189470 - 1189051 - | putative lipoprotein JTY_1095 1189582 - 1190148 + | hypothetical protein JTY_1096 1190145 - 1190540 + | hypothetical protein PE_PGRS19 1192583 - 1190568 - | PE-PGRS family protein TERM 639 1191416 - 1191465 + g 100 -19.2 -3.07816 | opp_overlap 1191409 CCATGACATGTTCGC CGCCGGCGC-CGGCGGCCGCGCCG TTGC CGCCGGCGCCGCCGTGC-CCGGCG TTACCTCCGTGACCG TERM 640 1192469 - 1192422 - G 78 -10.4 -4.07568 | gap 1, overlap 1192424 1192425 GGCGTGGGCGGAAAA CAGTGCCGCGACCGCCGCGGACA CCT CATCGGCACCGGCCGCGGC-CAG CACCGACGTCGGGGC TERM 641 1192467 - 1192424 - G 75 -11.6 -3.63744 | gap 1, overlap 1192422 1192425 CGTGGGCGGAAAACA GTGCCGCGACCGCCGCGGACA CCT CATCGGCACCGGCCGCGGC-C AGCACCGACGTCGGG PE_PGRS20.1 1193530 - 1192916 - | PE-PGRS family protein PE_PGRS20.2 1194758 - 1193553 - | PE-PGRS family protein TERM 642 1193931 - 1193876 - G 70 -13.6 -3.01712 | CGTTGCCGCCGAAGA TGCCGCCCTCTCCGCCGGCACCGGCG TTGC CGCCGCCGCCGCCGGTGCCGGCGTCG CCGCCGTTGCCGGAC JTY_1100 1196910 - 1195147 - | hypothetical protein echA8 1197680 - 1196907 - | enoyl-CoA hydratase echA9 1198729 - 1197692 - | enoyl-CoA hydratase TERM 643 1197841 - 1197803 - G 72 -13.1 -3.14211 | ATCCTTGTCGATCAA CTGCGCGCGGATGCCCT CCACC AGGTCATGCGAGCGCAG CGACGCCGATGACAC JTY_1103 1198916 - 1199752 + | putative transmembrane protein TERM 644 1200559 - 1200532 - g 74 -15.6 -2.66634 | overlap 1200529 GATGGGAGGACATCA TGCTCGCGGTCG AGTA CGACGGCGAGCA ACACCGTCTCAGCCG JTY_1104 1199868 - 1200719 + | hypothetical protein TERM 645 1200814 - 1200775 - T 86 -16.4 -3.1355 | overlap 1200779 TGGACGCAGAGTCAA CGCACTCGAGCGCCTCGC TCAC GCGAGGCGCTCGATCACC ATCGCCATGCCCTGG TERM 646 1200810 - 1200779 - T 90 -20.2 -2.56095 | overlap 1200775 CGCAGAGTCAACGCA CTCGAGCGCCTCGC TCAC GCGAGGCGCTCGAT CACCATCGCCATGCC fadA3 1202010 - 1200793 - | acetyl-CoA acetyltransferase JTY_1106 1203007 - 1202063 - | conserved exported protein TERM 647 1203158 - 1203182 + H 70 -12.1 -3.1739 | overlap 1203159 GCTAAGTTCGCGGGG TTGGCTGAGCC AGA GGCTCAGCCGC TTCGTCACATGCTGT TERM 648 1203159 - 1203181 + H 76 -15.6 -2.50113 | overlap 1203158 CTAAGTTCGCGGGGT TGGCTGAGCC AGA GGCTCAGCCG CTTCGTCACATGCTG TERM 649 1203593 - 1203622 + G 84 -13.5 -3.91144 | overlap 1203557 GCGGACGGCACTCGA CGCGCCGTCCTGT ACCT GCACGGCGGCGCG TTTCTGACGTGTGGA lipU 1203404 - 1204297 + | putative lipase cbs 1204354 - 1205748 + | putative cystathionine beta-synthase pra 1205950 - 1206672 + | putative proline-rich antigen homolog metB 1206704 - 1207870 + | cystathionine gamma-synthase greA 1208435 - 1207941 - | putative transcription elongation factor JTY_1112 1209055 - 1208621 - | hypothetical protein TERM 650 1209600 - 1209630 + G 70 -6 -4.17089 | overlap 1209601 1209623 TCGCTGCCATCAGGT TTCGGTGGCTGCCT ACG AGGCGGCCGGTGAC TTTTGCCGGTTTCCC TERM 651 1209657 - 1209693 + G 76 -15.1 -3.14132 | TCCCGACGCGGGTGA GCCGTGGACGGTGTCCA AGC TGTACTACGTCCACGGC TTCCTGCGGGAGCGG mca 1209157 - 1210023 + | mycothiol conjugate amidase TERM 652 1210054 - 1210078 + G 70 -11.3 -3.53444 | overlap 1210055 GCGTGATTGCTGAGG GCGGGCCCGGT AAC ACCGGACCCGA TTTCGGGAAGGCTAG TERM 653 1210055 - 1210077 + G 72 -14.8 -2.71924 | overlap 1210054 CGTGATTGCTGAGGG CGGGCCCGGT AAC ACCGGACCCG ATTTCGGGAAGGCTA JTY_1114 1210020 - 1210286 + | hypothetical protein JTY_1115 1210273 - 1212294 + | hypothetical protein JTY_1116 1213121 - 1212393 - | putative hemolysin-like protein JTY_1117 1213232 - 1214020 + | short (C15) chain Z-isoprenyl diphosphate synthase TERM 654 1214524 - 1214542 + G 72 -4.4 -4.56597 | opp_overlap 1214526, overlap 1214525 1214526 CTGTTGGCCGCGATC AACGCTCG CTT CGAGCGGA TTTTTGGGCGCCCGC TERM 655 1214821 - 1214874 + G 100 -21.5 -3.28712 | GTAGCGCCCGGCGTG CCCGGCGGCGCCGGCGGTGCCGGCG GCGC CGGCGGTGTCGGCGGACCCGCCGGG TTGTGGGGCCACGGG TERM 656 1215378 - 1215394 + G 71 -15.1 -2.55565 | overlap 1215377 1215379 1215381 TACCGGCGGTCAGGG CGGCGCC GGC GGCGCCG GTGTATTTAGCCTAT TERM 657 1215381 - 1215397 + G 70 -11.5 -3.41302 | overlap 1215378 1215377 1215379 CGGCGGTCAGGGCGG CGCCGGC GGC GCCGGTG TATTTAGCCTATTCG TERM 658 1215803 - 1215841 + G 79 -16.7 -3.01924 | gap 1 GCAGCGGCTCGGTCG GCATCGGCGGTGCCGGTG GTGC CGGCGGCACCGCCGG-GC TGTTCGGCGACGGTG TERM 659 1216076 - 1216118 + G 74 -15.4 -2.5547 | opp_overlap 1216054 1216053, overlap 1216075 CCGGTTCCGGTGCCG GCGGCGGTGGCGGTGGTGCC GGG GGCACCGGCGGCACCGCAGG GTTGCTGTACGGCGT PE_PGRS21 1214197 - 1216626 + | PE-PGRS family protein JTY_1119 1216803 - 1217123 + | hypothetical protein PE9 1217276 - 1217710 + | PE family protein PE10 1217589 - 1217894 + | PE family protein celA2a 1218280 - 1218384 + | putative cellulase celA2b 1218362 - 1218817 + | putative cellulase TERM 660 1219299 - 1219345 + G 86 -16.5 -3.61517 | gap 1 TGGCGGGCATTGGGT CGGCGCTGGCGGAGGCCAACGC CGCG GCGTTGGCC-CCGACGACGGCG TTGTTGGCCGCGGGT TERM 661 1220039 - 1220059 + G 77 -12.5 -3.67864 | GGCAACGGCGGCAAG GGCGGTGCT GGC GGCGCCGCC TTTAGCATTAACTTC TERM 662 1221025 - 1221053 + G 72 -13.7 -3.04144 | CGGCGGGACCGGTGG GTCCGGCGGGGCC GGT GGCAACGCCGGGC TGTTGGGCGTGGGCG TERM 663 1221692 - 1221746 + G 74 -14.9 -3.01712 | gap 2, opp_overlap 1221677, overlap 1221695 GGCGCGGGCGGCACC GGGGGCACCCCGGGGCCCGGCGGACCC GGC GGGTCCGGCGGGCTT-GGAG-GCCTGC TGTTCGGCCAAACCG TERM 664 1221695 - 1221743 + G 80 -17.4 -2.73875 | gap 2, opp_overlap 1221677, overlap 1221692 GCGGGCGGCACCGGG GGCACCCCGGGGCCCGGCGGACCC GGC GGGTCCGGCGGGCTT-GGAG-GCC TGCTGTTCGGCCAAA PE_PGRS22 1219232 - 1221784 + | PE-PGRS family protein coaA 1222940 - 1222002 - | pantothenate kinase TERM 665 1222298 - 1222285 - G 77 -3.1 -4.9755 | overlap 1222290 ACATACAACGAAAAA TCGAA CAGA TCCGA CACCATGAGCGTGGG TERM 666 1222675 - 1222689 + g 71 -2.7 -4.64676 | opp_overlap 1222671 1222672, overlap 1222671 1222676 CCGATGATGAACGGC ACCGG CCGGT CCGGG TTTTGTTGGGGCTCG glyA 1223328 - 1224608 + | serine hydroxymethyltransferase desA2 1224713 - 1225540 + | putative acyl-[acyl-carrier protein] desaturase phoH2 1225751 - 1227052 + | putative phoH-like protein TERM 667 1227114 - 1227073 - f 100 -28.3 -2.78384 | gap 1, opp_overlap 1227073 1227075 1227077 1227080, overlap 1227075 1227077 1227080 CCTCCCGCGAGCAGA CACAGAATCGCACTGCGCCG GCC CGGCGC-GTGCGATTCTGTG TCTGCTCGCCGGTAG TERM 668 1227073 - 1227114 + F 100 -28.3 -2.78816 | gap 1, opp_overlap 1227073 1227075 1227077 1227080, overlap 1227075 1227077 1227080 CCTCCCGCGAGCAGA CACAGAATCGCACTGCGCCG GCC CGGCGC-GTGCGATTCTGTG TCTGCTCGCCGGTAG TERM 669 1227112 - 1227075 - f 100 -25.1 -2.94099 | gap 1, opp_overlap 1227073 1227075 1227077 1227080, overlap 1227073 1227077 1227080 TCCCGCGAGCAGACA CAGAATCGCACTGCGCCG GCC CGGCGC-GTGCGATTCTG TGTCTGCTCGCCGGT TERM 670 1227075 - 1227112 + F 100 -25.1 -2.94218 | gap 1, opp_overlap 1227075 1227073 1227077 1227080, overlap 1227073 1227077 1227080 TCCCGCGAGCAGACA CAGAATCGCACTGCGCCG GCC CGGCGC-GTGCGATTCTG TGTCTGCTCGCCGGT TERM 671 1227110 - 1227077 - f 100 -21.9 -3.02471 | gap 1, opp_overlap 1227075 1227073 1227077 1227080, overlap 1227075 1227073 1227080 CCGCGAGCAGACACA GAATCGCACTGCGCCG GCC CGGCGC-GTGCGATTC TGTGTCTGCTCGCCG TERM 672 1227077 - 1227110 + F 100 -21.9 -3.02471 | gap 1, opp_overlap 1227077 1227075 1227073 1227080, overlap 1227075 1227073 1227080 CCGCGAGCAGACACA GAATCGCACTGCGCCG GCC CGGCGC-GTGCGATTC TGTGTCTGCTCGCCG TERM 673 1227107 - 1227080 - f 100 -17.8 -3.65656 | gap 1, opp_overlap 1227077 1227075 1227073 1227080, overlap 1227077 1227075 1227073 CGAGCAGACACAGAA TCGCACTGCGCCG GCC CGGCGC-GTGCGA TTCTGTGTCTGCTCG TERM 674 1227080 - 1227107 + F 100 -17.8 -3.65656 | gap 1, opp_overlap 1227080 1227077 1227075 1227073, overlap 1227077 1227075 1227073 CGAGCAGACACAGAA TCGCACTGCGCCG GCC CGGCGC-GTGCGA TTCTGTGTCTGCTCG JTY_1129 1227139 - 1228014 + | putative glycosyl hydrolase JTY_1130 1228898 - 1228017 - | putative membrane glycine and proline rich protein fumC 1230319 - 1228895 - | fumarate hydratase glpX 1231336 - 1230350 - | fructose 1,6-bisphosphatase II TERM 675 1232036 - 1231994 - g 76 -8.5 -4.25104 | GGGTTCGGACGAAAA CGGTGCCGTCGAGCCG-GT ATGGACG ACACGGCTCACCGG-ACCG GGCGGGGCCACCCAG JTY_1133 1231437 - 1232138 + | hypothetical protein JTY_1134 1233173 - 1232145 - | hypothetical protein TERM 676 1232226 - 1232252 + g 71 -9.4 -3.85698 | overlap 1232227 GCGGCGGACGGGTGG TGCTTCGAACTG TTC CAGTTCGACGCC TTTGTACACCGCGAG TERM 677 1232547 - 1232493 - G 75 -13.7 -3.29829 | GATATTGCCGTAGAA GATCATCCCGAT-GCCGAACGGAATCG TCA CGATGCCG-CCGCCCAGCGGGATGATC GACAACGCGGTGAGC JTY_1135 1233724 - 1233413 - | hypothetical protein JTY_1136 1234044 - 1233724 - | hypothetical protein JTY_1137 1234054 - 1234743 + | putative para-nitrobenzyl esterase JTY_1138 1235064 - 1235579 + | putative para-nitrobenzyl esterase TERM 678 1235600 - 1235619 + T 77 -2 -5.00616 | gap 1 AGATAATTCTGGCTA CGGCTTGAC TGT GGCG-GCCG TTTTTTCCGCCCGGG JTY_1139 1236709 - 1235597 - | putative cholesterol dehydrogenase TERM 679 1236335 - 1236371 + g 100 -20.2 -3.35679 | gap 1, opp_overlap 1236335, overlap 1236335 TGACGTGTAGACGAA CC-GCTGCACCCCGGCC CGCT GGCCGGCGTGCAGCAGG TTCTCGGTGCCGCCG TERM 680 1236335 - 1236370 + g 95 -20.4 -2.61264 | opp_overlap 1236335, overlap 1236335 TGACGTGTAGACGAA CCGCTGCACCCCGGCC CGCT GGCCGGCGTGCAGCAG GTTCTCGGTGCCGCC TERM 681 1236370 - 1236335 - G 100 -22.6 -3.26471 | opp_overlap 1236335 1236335 TGACGTGTAGACGAA CCGCTGCACCCCGGCC CGCT GGCCGGCGTGCAGCAG GTTCTCGGTGCCGCC xseB 1236976 - 1236719 - | exodeoxyribonuclease VII small subunit xseA 1238213 - 1236966 - | exodeoxyribonuclease VII large subunit TERM 682 1237593 - 1237563 - G 75 -6.7 -4.36914 | overlap 1237564 CGTCTCGTCAGAAAA CGGCAGCAGGTCC TCGAC GGAGCCGCCGCCC CGGGCCAGCACGATC JTY_1142 1238848 - 1238210 - | hypothetical protein lytB 1238938 - 1239945 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase JTY_1144 1240945 - 1239962 - | hypothetical protein TERM 683 1241508 - 1241472 - g 75 -11.6 -3.72027 | gap 2, overlap 1241458 1241459 AGCGCGCACCAACAA GGCGCGCAA-GCCG-GTC TAC GACGCGGCACTGCGTGCC CAGCAGGTGCTCGAC TERM 684 1241622 - 1241667 + G 73 -13.9 -3.14132 | gap 1, overlap 1241662 1241663 TGTGTTCAACGCCGA CGAGGCGGTGCTCACCGACCCG GCG CGAGTCGGTGAGCTGCG-CGCG TTGGTGGCGCCCGCC ychF 1241008 - 1242081 + | translation-associated GTPase JTY_1146 1242169 - 1242366 + | hypothetical protein JTY_1147 1242363 - 1242737 + | hypothetical protein JTY_1148 1242940 - 1243638 + | hypothetical protein JTY_1150 1244143 - 1243868 - | hypothetical protein JTY_1149 1243756 - 1243941 + | hypothetical protein JTY_1151 1244386 - 1244709 + | hypothetical protein JTY_1152 1245584 - 1244724 - | hypothetical protein JTY_1153 1245766 - 1245617 - | hypothetical protein JTY_1154 1246257 - 1245763 - | hypothetical protein zwf1 1246460 - 1247860 + | glucose-6-phosphate 1-dehydrogenase gnd2 1247882 - 1248904 + | 6-phosphogluconate dehydrogenase-like protein bpoB 1249805 - 1248897 - | putative peroxidase TERM 685 1249583 - 1249605 + g 100 -13.4 -4.56597 | opp_overlap 1249571, overlap 1249586 1249600 CGACGTGGTGCCCCT CGTCGGCCAG GAT CTGGCCGGTG TTTTTCCAGGAAAAC TERM 686 1249586 - 1249602 + g 71 -13.7 -2.93708 | overlap 1249583 1249600 CGTGGTGCCCCTCGT CGGCCAG GAT CTGGCCG GTGTTTTTCCAGGAA TERM 687 1250307 - 1250323 + G 78 -13.7 -3.54424 | overlap 1250317 CGGTGATCATGTCGG TGCCGCC GTC GGCGGCA TTTCGCCCGCTGGGC ephC 1249880 - 1250830 + | putative epoxide hydrolase TERM 688 1251352 - 1251376 + G 71 -15 -2.63102 | gap 1 CGGGTTTCCTGCCGT G-GCGGGCCGC CCAT GCGGCCCGCGC TCATCTCCGACTGGT JTY_1159 1250835 - 1252079 + | hypothetical protein JTY_1160 1252688 - 1252083 - | hypothetical protein ppdK 1254157 - 1252685 - | putative pyruvate, phosphate dikinase JTY_1162 1255725 - 1254370 - | hypothetical protein JTY_1163 1257287 - 1255827 - | putative transcriptional regulator protein JTY_1164 1257308 - 1258888 + | hypothetical protein TERM 689 1258984 - 1258974 - g 74 -2.4 -4.8048 | GCCCGACATCAAAAA GGGC CTC GCCG GCGTGGTGGTGGACA gltA1 1258885 - 1260066 + | methylcitrate synthase TERM 690 1260195 - 1260212 + G 72 -6.9 -4.18018 | overlap 1260197 GTGGGTTTTGGCACT CCGGTGC TGCT GCACCTG TTTTACGTCGCCAAG TERM 691 1260712 - 1260728 + G 79 -2.1 -5.06414 | overlap 1260688 GCGGCGAGGTCTACG CGACGCT GAC GGTGACG TTTTTGTTCGGCCGC TERM 692 1260887 - 1260899 + G 71 -3.4 -4.58283 | GTTTCGGCCGCGGTT CATC AAGCG GATG TTTTTCAAGAAGTTC JTY_1166 1260078 - 1261808 + | hypothetical protein metE 1264099 - 1261820 - | putative 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase TERM 693 1262621 - 1262663 + g 77 -16.3 -2.62396 | gap 1 CTGCACCATGTCGTT GC-GCTCCGGTTCGCCGTGC ACCA GCACGTCGAGCCCGAGCCGC TCCTGTAGCGCGATC TERM 694 1262870 - 1262904 + g 75 -11.5 -3.63305 | gap 2 ATTGCCGCGGTGGGC TCCGGACGCGACGATCG CCT CGAT-G-CGCGCCCGGA TTTGCCCATTGTGTA TERM 695 1264745 - 1264692 - g 80 -14.6 -3.40403 | gap 2, overlap 1264693 GGCCGCCTACCAGAA GTTCGGGCAGGAGCACGCCGCCGCGA TCCG TGGCGGCGCCGTGCTGC-ACCCGA-C GGCCACCGCCACGAC TERM 696 1264745 - 1264693 - g 71 -14.8 -2.64099 | gap 1, overlap 1264692 GCCGCCTACCAGAAG TTCGGGCAGGAGCACGCCGCCGCGA TCCG TGGCGGCGCCGTGCTGC-ACCCGAC GGCCACCGCCACGAC JTY_1168 1264675 - 1264911 + | hypothetical protein PPE16 1266881 - 1265025 - | PPE family protein JTY_1170 1267067 - 1267309 + | putative acetyl-CoA acetyltransferase JTY_1171 1267359 - 1267700 + | putative enoyl-CoA hydratase JTY_1172 1268208 - 1267840 - | hypothetical protein JTY_1173 1269241 - 1268225 - | putative oxidoreductase JTY_1174 1269738 - 1269238 - | hypothetical membrane protein TERM 697 1269925 - 1269943 + H 81 -16 -2.78463 | TGGGACCGCCATTGC CGGGCCGT TCC ACGGCCCG TATCGTCGCCGCGCT TERM 698 1269983 - 1270001 + H 81 -16 -2.78463 | TGCGCGGCTTCTCCT CGGGCCGT TCC ACGGCCCG TATCGTCGCCGCGCT JTY_1175 1270100 - 1270948 + | putative integral membrane protein echA11 1271762 - 1270956 - | enoyl-CoA hydratase echA10 1272711 - 1271905 - | enoyl-CoA hydratase TERM 699 1272325 - 1272304 - G 81 -5.1 -4.77438 | AGCGAGCATGAAAAA CGCATTGTC GGAG GCCAATACG AGGTCACAAGCGAGC TERM 700 1273188 - 1273164 - g 74 -12.1 -3.53012 | opp_overlap 1273184, overlap 1273126 CCGGCTGGGGCCAAA CCGGCCCGC GTAGTCA GCAGGCCGG TCACGACATCAACTA mcr 1272815 - 1273897 + | putative alpha-methylacyl-CoA racemase JTY_1179 1273909 - 1274661 + | putative short-chain type dehydrogenase/reductase TERM 701 1274698 - 1274678 - f 100 -13.9 -4.72007 | overlap 1274680 CCGCACCAAAAGAAA GACCCCCGC GTT GCGGGGGAC CGGAATCGGGAACAA TERM 702 1274696 - 1274680 - f 95 -15.1 -3.97149 | overlap 1274678 GCACCAAAAGAAAGA CCCCCGC GTT GCGGGGG ACCGGAATCGGGAAC mmpL13 1275176 - 1277521 + | putative transmembrane transport protein JTY_1181 1277654 - 1278304 + | hypothetical protein JTY_1182 1280502 - 1279054 - | hypothetical protein TERM 703 1279164 - 1279174 + g 83 -8.2 -4.62302 | GTAGCCATTCGGTGT CGCC GTG GGCG TTTTTGCGGGTCTTC JTY_1183 1280647 - 1281054 + | putative transposase JTY_1185 1282371 - 1281658 - | NAD-dependent deacetylase TERM 704 1282086 - 1282053 - G 91 -13.1 -4.25676 | gap 1 AACGAAATTCGAAAA GGCTGCCGTGCAGGTG ATG CACC-GCACCGCTGCC GGCGCGCTCGTGCAG JTY_1186 1282409 - 1282774 + | putative transcriptional regulatory protein omt 1283600 - 1282752 - | putative O-methyltransferase JTY_1188 1284238 - 1283597 - | hypothetical protein JTY_1189 1284183 - 1284626 + | hypothetical protein JTY_1190 1285060 - 1285647 + | hypothetical protein JTY_1191 1286853 - 1285810 - | hypothetical ala-, pro-rich protein JTY_1192 1287544 - 1286861 - | hypothetical ala-, pro-rich protein pimE 1287674 - 1288969 + | mannosyltransferase phhB 1289250 - 1288966 - | pterin-4-carbinolamine dehydratase mutT2 1289277 - 1289702 + | putative mutator protein TERM 705 1290330 - 1290303 - g 74 -14.8 -3.02144 | opp_overlap 1290300 1290303 GGACCGGCCCGAATA CGAGCCACGAGG TTGT CCCCGTGGCGCG TCGTTCTCCTGGTAC TERM 706 1292021 - 1292045 + G 72 -14.9 -2.75064 | overlap 1292018 ATGTCGCCGACGAGG CCCGCGCCGCG GGC CGCGACGTGGG TGATTACGTCGCCGA narG 1290010 - 1293708 + | putative respiratory nitrate reductase alpha chain narH 1293747 - 1295423 + | putative respiratory nitrate reductase subunit beta narJ 1295480 - 1296085 + | putative respiratory nitrate reductase delta chain narI 1296088 - 1296828 + | putative respiratory nitrate reductase gamma chain TERM 707 1297177 - 1297188 + G 75 -7.2 -4.33417 | overlap 1297180 TCCGAGGGTCCATTG CCGC AGAC GCGG TTTGTTCTGCGTAAA typA 1296850 - 1298736 + | putative GTP-binding translation elongation factor TERM 708 1299802 - 1299812 + G 72 -6.8 -4.20696 | GGCCGACACCCAGGT TCGC AAG GCGA TTTTGGGGTTGCTGG lpqW 1298834 - 1300741 + | putative lipoprotein JTY_1202 1301374 - 1300769 - | putative transcriptional regulatory protein PPE17a 1302487 - 1301945 - | PPE Family protein PE11 1302807 - 1302505 - | PE family protein mshB 1302987 - 1303898 + | N-Acetyl-1-D-myo-Inosityl-2-Amino-2-Deoxy-alpha- D-Glucopyranoside deacetylase JTY_1207 1303990 - 1304430 + | hypothetical protein PE12 1305364 - 1304438 - | PE family protein fbiC 1305614 - 1308184 + | FO synthase JTY_1210 1308622 - 1308290 - | hypothetical protein fadH 1310847 - 1308823 - | putative NADPH dependent 2,4-dienoyl-CoA reductase TERM 709 1309722 - 1309767 + g 77 -16.3 -2.52464 | gap 3, opp_overlap 1309747 1309748 CGGCCACCGAGCGGG CGCGCCGGGTCG-GGGACAGCA CCAAC TGC-GTCTCGCG-CCCGGCGCG TGGATTGAGCAGACA JTY_1212 1311413 - 1310844 - | hypothetical protein fdxC 1311626 - 1311952 + | putative ferredoxin TERM 710 1312847 - 1312802 - g 70 -10.3 -3.73953 | gap 1, opp_overlap 1312813 1312825, overlap 1312828 ACGACGCGCACGAAA GGCAACAGCGGGAGCGCTACGC ACA ACGGCGTGC-CGCGCTGTTGCC GGCGCTGGGCTCCGC JTY_1214 1311985 - 1313073 + | N-succinyldiaminopimelate aminotransferase JTY_1215 1315920 - 1313101 - | hypothetical protein TERM 711 1314850 - 1314863 + g 80 -9.5 -4.16842 | overlap 1314829 CAGCGCGTGCGCGTC GCGCG GATC CGCGC TTTGTTGCAGGTGCC TERM 712 1315964 - 1316005 + H 100 -26.9 -2.78463 | gap 1, opp_overlap 1315964 1315971, overlap 1315971 TTGGGCGCGAGCAGA CGCAAAAGGCCCCG-AATCC AAC GGATTTCGGGGCCTTTTGCG TCTGCTCGCGCCCGT TERM 713 1316005 - 1315964 - H 100 -26.9 -2.78384 | gap 1, opp_overlap 1315964 1315971, overlap 1315971 TTGGGCGCGAGCAGA CGCAAAAGGCCCCG-AATCC AAC GGATTTCGGGGCCTTTTGCG TCTGCTCGCGCCCGT TERM 714 1315971 - 1315998 + H 100 -16.4 -4.24948 | gap 1, opp_overlap 1315964 1315971, overlap 1315964 CGAGCAGACGCAAAA GGCCCCG-AATCC AAC GGATTTCGGGGCC TTTTGCGTCTGCTCG TERM 715 1315998 - 1315971 - H 100 -16.4 -4.24948 | gap 1, opp_overlap 1315971 1315964, overlap 1315964 CGAGCAGACGCAAAA GGCCCCG-AATCC AAC GGATTTCGGGGCC TTTTGCGTCTGCTCG TERM 716 1317686 - 1317646 - g 80 -14.8 -3.40403 | gap 1, opp_overlap 1317639 1317638 1317675, overlap 1317631 GCGCCGGTATCAGAA CCAGCGGCTTCGGGACCTG AGCT CAC-TCCCGAAGCCGGTGG GCTGGCGTTGTTTCC TERM 717 1317822 - 1317869 + G 85 -13.6 -4.08767 | gap 3 GGGCTACACGCTGTC CTGC-CGCCGTGCAC-ACCGACC CGTCC GGACGGTTGTG-ACGGCGAGCAG TTTTGACGAGCTGAG TERM 718 1322026 - 1322048 + G 75 -9.1 -4.09685 | CAAGGCGCATATGCG GCGGCCAAC AGCTG GTTGGACGC TTTTGCCCACTGGCG pks3 1316347 - 1322604 + | putative polyketide beta-ketoacyl synthase papA3 1322657 - 1324075 + | putative polyketide synthase associated protein mmpL10 1324142 - 1327150 + | putative transmembrane transport protein JTY_1219 1328233 - 1327154 - | hypothetical protein TERM 719 1327696 - 1327672 - G 72 -5 -4.57073 | gap 1, overlap 1327685 TACCGGGGGGAAAAA TTCGG-GCCAG GAAG CTCGCTCCGAA CGCATGACGTCCGGT fadD21 1330134 - 1328398 - | acyl-CoA synthetase JTY_1221 1331927 - 1330311 - | hypothetical protein TERM 720 1331799 - 1331759 - G 70 -11.8 -3.45742 | gap 1, overlap 1331757 1331761 1331762 CGATCAGGAAGAACA CAT-CGGCCGAGCCCGCCG CGGC CGCCAGGCCCAGCCGCACG TCGTCGGAATCGATC TERM 721 1331796 - 1331761 - G 71 -12.4 -3.29544 | overlap 1331759 1331757 1331762 ATCAGGAAGAACACA TCGGCCGAGCCCGCCG CGGC CGCCAGGCCCAGCCGC ACGTCGTCGGAATCG TERM 722 1331795 - 1331762 - G 74 -15.9 -2.57003 | overlap 1331761 1331759 1331757 TCAGGAAGAACACAT CGGCCGAGCCCGCCG CGGC CGCCAGGCCCAGCCG CACGTCGTCGGAATC rocA 1332012 - 1333643 + | putative pyrroline-5-carboxylate dehydrogenase JTY_1223 1333643 - 1334632 + | putative proline dehydrogenase sigI 1334714 - 1335586 + | RNA polymerase sigma factor TERM 723 1336161 - 1336179 + G 85 -13.1 -4.07687 | overlap 1336120 CCGGTCGGCACTGGA GCCGCGC AGACC GCGCGGC TTTTCGGGCGGGAAT JTY_1225 1335602 - 1336480 + | hypothetical protein TERM 724 1336929 - 1336986 + G 73 -10.9 -3.74747 | overlap 1336892 1336982 CCGACCGGGTGGTCG CCGCCGGTGTCCTCGGCGGCGTCGCGC CGAC GCGCGGCCCGGACGCGATTAGCGGCGG TTTGATGCGCCTTGG JTY_1226 1336553 - 1337467 + | hypothetical protein JTY_1227 1337549 - 1338376 + | hypothetical protein TERM 725 1339632 - 1339650 + G 71 -14.6 -2.62184 | TGGCGGAGGCGGCAG TCGTCGGG GTG CCCGACGA TGATCTAGGCCAGCG JTY_1228 1338416 - 1339837 + | acyl-CoA synthetase JTY_1229 1341135 - 1339870 - | hypothetical protein TERM 726 1340236 - 1340218 - G 77 -10.2 -3.91488 | AACGTCGGCAAAGAA GGCGACCC GCT GGGTCGAC CGTAGCCGTGACAAG PE13 1341611 - 1341910 + | PE family protein TERM 727 1342433 - 1342400 - g 72 -13.8 -3.01924 | opp_overlap 1342426 GATGTGGGCCCAAGA CGCCGCCGCGATGT TTGGCT ACGCCGCGGCGACG GCGACGGCGACGGCG PPE18 1341957 - 1343129 + | PPE family protein esxK 1343264 - 1343560 + | putative EsaT-6 like protein 3 esxL 1343611 - 1343895 + | putative EsaT-6 like protein 4 JTY_1234 1345210 - 1343963 - | putative transposase TERM 728 1346220 - 1346196 - g 83 -2.7 -5.21709 | overlap 1346197 1346198 GGGCAGACGAAAAAA CCCGTTTGGGC CCA GCCGAAACGCC GATTGCCCAAGTACT JTY_1235 1345547 - 1346824 + | putative integral membrane transport protein JTY_1236 1347774 - 1346821 - | putative transferase dapE 1347865 - 1348929 + | dipeptidase JTY_1238 1349510 - 1348926 - | hypothetical protein JTY_1239 1351229 - 1349541 - | hypothetical protein TERM 729 1350990 - 1350958 - G 72 -14.7 -2.75064 | overlap 1350955 CCGGTCAGGGAACTA CGCGCCGCCCGCAGC AGC GCCGCGGGCCGCCCA ATGTCGGCTCCGGAG JTY_1240 1351324 - 1351887 + | hypothetical protein fadD6 1351937 - 1353730 + | acyl-CoA synthetase folP2 1353796 - 1354752 + | putative dihydropteroate synthase 2 JTY_1243 1354749 - 1355723 + | hypothetical protein JTY_1244 1355762 - 1356130 + | hypothetical protein tagA 1356127 - 1356741 + | putative DNA-3-methyladenine glycosylase I JTY_1246 1356848 - 1357075 + | hypothetical protein JTY_1247 1358266 - 1357103 - | putative glycosyl transferase glgC 1358441 - 1359655 + | glucose-1-phosphate adenylyltransferase TERM 730 1359679 - 1359720 + T 90 -19.7 -2.78463 | gap 1, opp_overlap 1359679 1359681 1359683 1359686, overlap 1359686 AGCGGCGCGAGCAGA CACAGAATCGCCC-ATTTCG GCA CGAAATTGGGCGATTCTGCG TCTGCTCGGCGCGGT TERM 731 1359720 - 1359679 - T 100 -21.9 -2.78463 | gap 1, opp_overlap 1359679 1359686, overlap 1359681 1359683 1359686 AGCGGCGCGAGCAGA CACAGAATCGCCC-ATTTCG GCA CGAAATTGGGCGATTCTGCG TCTGCTCGGCGCGGT TERM 732 1359718 - 1359681 - T 93 -20.9 -2.94099 | gap 1, opp_overlap 1359679 1359686, overlap 1359679 1359683 1359686 CGGCGCGAGCAGACA CAGAATCGCCC-ATTTCG GCA CGAAATTGGGCGATTCTG CGTCTGCTCGGCGCG TERM 733 1359716 - 1359683 - T 90 -17.7 -3.02471 | gap 1, opp_overlap 1359679 1359686, overlap 1359681 1359679 1359686 GCGCGAGCAGACACA GAATCGCCC-ATTTCG GCA CGAAATTGGGCGATTC TGCGTCTGCTCGGCG TERM 734 1359686 - 1359713 + T 79 -13.6 -3.40299 | gap 1, opp_overlap 1359683 1359681 1359679 1359686, overlap 1359679 CGAGCAGACACAGAA TCGCCC-ATTTCG GCA CGAAATTGGGCGA TTCTGCGTCTGCTCG TERM 735 1359713 - 1359686 - T 81 -13.6 -3.65656 | gap 1, opp_overlap 1359686 1359679, overlap 1359683 1359681 1359679 CGAGCAGACACAGAA TCGCCC-ATTTCG GCA CGAAATTGGGCGA TTCTGCGTCTGCTCG PE14 1360230 - 1359898 - | PE family protein JTY_1250 1362049 - 1360364 - | hypothetical protein JTY_1251 1362751 - 1362077 - | putative integral membrane protein JTY_1252 1364406 - 1362760 - | putative tetronasin-transport integral membrane protein ABC transporter TERM 736 1363945 - 1363915 - G 78 -15.5 -3.16267 | GGCAAGCAGACCCAA TGCACCGATCGCG CCGGT CGCGATCGACGCA CCGAACGACAGCAGC JTY_1253 1365338 - 1364403 - | putative tetronasin-transport ATP-binding protein ABC transporter JTY_1254 1365966 - 1365328 - | putative transcriptional regulatory protein TERM 737 1366094 - 1366053 - R 91 -21.2 -2.78463 | gap 1, opp_overlap 1366053 1366060, overlap 1366060 ACTTTGCCGAGCAGA CGCAAAATCGCCCTGGAAC GCACG GTTC-AGGGCGATTTTGCG TCTGCTCGCCGAATT TERM 738 1366053 - 1366094 + r 100 -22.5 -2.78715 | opp_overlap 1366053 1366060, overlap 1366060 ACTTTGCCGAGCAGA CGCAAAATCGCCCTGGAAC GCAC GGTTCAGGGCGATTTTGCG TCTGCTCGCCGAATT TERM 739 1366060 - 1366087 + r 91 -12 -4.24948 | opp_overlap 1366053 1366060, overlap 1366053 CGAGCAGACGCAAAA TCGCCCTGGAAC GCAC GGTTCAGGGCGA TTTTGCGTCTGCTCG TERM 740 1366087 - 1366060 - R 89 -10.7 -4.24948 | gap 1, opp_overlap 1366060 1366053, overlap 1366053 CGAGCAGACGCAAAA TCGCCCTGGAAC GCACG GTTC-AGGGCGA TTTTGCGTCTGCTCG JTY_1255 1366755 - 1366108 - | putative methyltransferase sigE 1367018 - 1367791 + | RNA polymerase sigma factor JTY_1257 1367949 - 1368413 + | hypothetical protein TERM 741 1368601 - 1368617 + G 84 -9.3 -4.56597 | opp_overlap 1368577 GAACGGCGGAGGCCG CCTGGCG CCG CGCCCGG TTTTTCGGCCACCGG htrA 1368482 - 1370068 + | putative serine protease tatB 1370070 - 1370465 + | sec-independent translocase JTY_1260 1371328 - 1370498 - | hypothetical protein JTY_1261 1372902 - 1371439 - | putative transmembrane protein TERM 742 1371863 - 1371916 + g 100 -23.2 -3.36327 | gap 2, opp_overlap 1371844 GCCCGGGTCCACCTG CGCCGG-GCGGCGGCCGGGCCG-TGC CGGC GCAGCGGCCCCGCTGCCGCGTCGGTG TTGTCGATCAGGTCG JTY_1262 1373432 - 1372899 - | putative transmembrane protein lpqX 1373527 - 1374084 + | putative lipoprotein mrp 1375556 - 1374384 - | putative MRP-related protein JTY_1265 1376804 - 1375569 - | hypothetical protein JTY_1266 1377471 - 1376929 - | hypothetical protein JTY_1267 1378775 - 1377468 - | hypothetical protein JTY_1268 1379433 - 1378837 - | hypothetical membrane protein JTY_1269 1379583 - 1380110 + | putative transmembrane protein lpqY 1380131 - 1381537 + | putative sugar-binding lipoprotein TERM 743 1381554 - 1381569 + G 78 -10.4 -4.13767 | opp_overlap 1381551 CTCCGTTGAACAGCG GACCGC CACC GCGGTC TTTTCCCGTACCGGG sugA 1381534 - 1382457 + | putative sugar-transport integral membrane protein ABC transporter TERM 744 1383191 - 1383223 + G 75 -3.4 -4.77698 | gap 1, overlap 1383180 1383195 GGCTCGATCGCGGCC GGCG-CGATCGTGAT TACG ATCCCGATCATCGTC TTTGTTTTAATCTTC sugB 1382462 - 1383286 + | putative sugar-transport integral membrane protein ABC transporter sugC 1383291 - 1384472 + | putative sugar-transport ATP-binding protein ABC transporter corA 1385649 - 1384549 - | putative magnesium and cobalt transport transmembrane protein mdh 1385820 - 1386809 + | malate dehydrogenase JTY_1276 1386885 - 1387145 + | hypothetical protein JTY_1277 1387142 - 1387573 + | hypothetical protein PE_PGRS23 1389284 - 1387596 - | PE-PGRS family protein TERM 745 1388075 - 1388022 - G 78 -14.4 -3.53012 | CCCGCTGCCCCCAAA GCCGCCGGCGCCACCAACGTCAGC CGAGGC ACCGACGCCGCCGTCGCCGCCGGC ACCACCATTGCCCCC TERM 746 1388330 - 1388316 - G 75 -11.4 -3.74251 | GACAGCGTCACCAAA GCCGCT TTG AGCGGC GCCACCGTTACCGCC lpqZ 1389464 - 1390324 + | putative lipoprotein JTY_1280 1391235 - 1390405 - | putative short-chain type dehydrogenase/reductase JTY_1281 1391585 - 1391292 - | hypothetical protein JTY_1282 1391851 - 1391582 - | hypothetical protein TERM 747 1391674 - 1391700 + g 74 -10 -3.76224 | opp_overlap 1391662 GAATGGCCTCGCTGG CGCCAGGGGTGC GTA GCACCTCCAGCG TTTCCTCGATGGACG TERM 748 1391936 - 1391986 + r 79 -15.5 -2.86432 | gap 1 TCGTCGCTGTTTGAT GTCTCCTCGA-GCGTTCGGCTGAG CGAA CTCAGCCGAACGCCTCGTCGAGGA TCTCCTGCTGTTCGA kgd 1395608 - 1391964 - | alpha-ketoglutarate decarboxylase TERM 749 1392303 - 1392324 + g 70 -10.1 -3.66844 | opp_overlap 1392293 ATACAGCTTGCCACT GGTCAGCAG GATC CGGCTGACC TTGTTGCGGTCTCCG JTY_1284 1396589 - 1395801 - | hypothetical protein TERM 750 1398402 - 1398348 - gR 78 -15.7 -2.76046 | gap 2, overlap 1398345 GGAACCGGAAGAGGA TTGCGACACC-CAGCCGCTG-CGGGCG TCG CGCCCGGCAGCGGCCGCAGCGTCACGC AGCGGTGCTGGGGGT JTY_1286 1401847 - 1398428 - | hypothetical protein JTY_1285 1396786 - 1398525 + | putative drug-transport integral membrane protein TERM 751 1399346 - 1399385 + gT 71 -3.4 -4.57569 | gap 1 TGTGTACTGGCTCCC GTCGATCGACTGCCAGCGC CCA GCGGTG-TGGTCGTGCGGC TTTTTGGCGACCTGC TERM 752 1401734 - 1401748 + gT 70 -12.8 -2.92613 | overlap 1401730 GTCGTCAACTGCGAC GGCCGG TCC CCGGCC TAGTTTCGCGTCGAA lprE 1402511 - 1401903 - | putative lipoprotein TERM 753 1403844 - 1403893 + G 78 -15.9 -3.21099 | gap 2, overlap 1403846 AGCATGATGTCCCGA TGGCTGACATCGCCGCGGCACTG GCCGTG CAGTGCCGCGGCGGTG--AGGCA TTCCTGATGGCACCC TERM 754 1403846 - 1403892 + G 87 -18.8 -2.52516 | gap 1, overlap 1403844 CATGATGTCCCGATG GCTGACATCGCCGCGGCACTG GCCGTG CAGTGCCGCGGCGGTGA-GGC ATTCCTGATGGCACC deaD 1402577 - 1404268 + | putative cold-shock dead-box protein a homolog TERM 755 1404303 - 1404284 - g 77 -10 -3.90112 | gap 1, overlap 1404287 CCCTGCCCAAGGAAA GAG-CCGCC CAG GGCGGACTC GAGCGGATCGCCCAC TERM 756 1404447 - 1404462 + G 91 -9 -4.79223 | GTCGTCCCGCATGGA GATCGG CGTT CCGATC TTTTTCGTGCTGTCG JTY_1289 1404265 - 1405416 + | putative acyltransferase JTY_1290 1405684 - 1405385 - | hypothetical protein JTY_1291 1406940 - 1405681 - | putative integral membrane transport protein JTY_1292 1406939 - 1407838 + | hypothetical protein JTY_1293 1407840 - 1408664 + | putative oxidoreductase JTY_1294 1408649 - 1408957 + | putative oxidoreductase JTY_1295 1409532 - 1409083 - | hypothetical protein JTY_1296 1409971 - 1409537 - | hypothetical HIT-like protein amiB2 1410030 - 1411418 + | amidase TERM 757 1412565 - 1412603 + G 70 -2.3 -4.62069 | AGTGGTCCTTCGCCG GCC-CCCGTCGCCTCAGGG GAA TCC-GGGGTGACGTCAGGC TTTTTCGAGTCCGGC JTY_1298 1411493 - 1412686 + | adenylyl cyclase TERM 758 1413202 - 1413178 - g 89 -11.3 -4.24342 | overlap 1413179 GCCCCGAGGAAGAAA GTGCGGCCCGA GCC TCGGGCCGCGT GTCGCGATTCCGCGA TERM 759 1413201 - 1413179 - g 76 -14.8 -3.14284 | overlap 1413178 CCCCGAGGAAGAAAG TGCGGCCCGA GCC TCGGGCCGCG TGTCGCGATTCCGCG JTY_1299 1412859 - 1413539 + | hypothetical protein pknH 1415349 - 1413559 - | putative transmembrane serine/threonine-protein kinase H embR 1416856 - 1415690 - | putative transcriptional regulatory protein TERM 760 1416481 - 1416498 + g 89 -8.3 -5.00616 | overlap 1416477 ACCGGCCGGCGGCGG CCGCGTG CACG CCCGCGG TTTTTTCGGCAACAA TERM 761 1416610 - 1416558 - G 71 -12.6 -3.32963 | gap 1 ATGCTGAGCCGATAA CCCGGCGGCGCTGCGGCCAACACCA CCCG TGG-GTCGATCCCGGCGCCACCGAG GAGCTTACGCAGATT TERM 762 1417098 - 1417140 + r 81 -16.3 -2.82635 | gap 1, opp_overlap 1417091 1417090, overlap 1417103 CCAAACATGCGATCG GCGGGCAGCCGACCCGGTGT TCTT GCAACGAGT-GGCTGCCCGC TGTGGTGATCGACAT JTY_1302 1417865 - 1417167 - | hypothetical protein JTY_1303 1418462 - 1418088 - | conserved putative secreted protein lprA 1419257 - 1418523 - | putative lipoprotein TERM 763 1418648 - 1418662 + g 72 -7.1 -4.1964 | opp_overlap 1418642 CCGAAGCGATCCAGA CGGTG GTGGG CACCG TTTTGACGTCTTCGG TERM 764 1419386 - 1419398 + r 70 -7.7 -3.9941 | opp_overlap 1419396 CGGCCGAATTGAATG GCGTT TCA AACGC TTTCGTTGTCCGGCG TERM 765 1419458 - 1419419 - R 95 -18.7 -3.53012 | gap 1, overlap 1419396 1419424 TTGTCCGGCGGCAAA GCGAATGCGGGGATCCCG GTTGA CGGGATCCCCGCAT-CGG GTGGGCAGCGGCTAG TERM 766 1419454 - 1419424 - R 100 -22.7 -3.27525 | overlap 1419396 1419419 CGGCGGCAAAGCGAA TGCGGGGATCCCG GTTGA CGGGATCCCCGCA TCGGGTGGGCAGCGG JTY_1305 1419811 - 1419470 - | hypothetical secreted protein JTY_1306 1421814 - 1419919 - | putative drugs-transport transmembrane ATP-binding protein ABC transporter TERM 767 1420970 - 1420994 + g 72 -13.5 -3.09327 | TCGTGGAACCGTTCT CGTGCGGCCGC TTG GTGGCCGAACG TCTTGACTACCGTGA JTY_1307 1423559 - 1421811 - | putative drugs-transport transmembrane ATP-binding protein ABC transporter TERM 768 1423829 - 1423802 - g 83 -9 -4.30719 | TCCGGCGACAACAAA CCGGGAGCGACG ATCC CGTCGACACCGG CAAACGCTGAGGGCC lprB 1423706 - 1424263 + | putative lipoprotein lprC 1424260 - 1424802 + | putative lipoprotein JTY_1310 1425423 - 1424947 - | hypothetical protein JTY_1311 1425673 - 1426926 + | hypothetical protein TERM 769 1427232 - 1427198 - g 71 -12.2 -3.29461 | gap 1 CAAGCGTTTCCACAA GCGGTGCGAG-ACGG AGTTGA CCGTGCTGGCACCGC GCCGCGAGCAGCTGA JTY_1312 1426923 - 1429550 + | hypothetical protein TERM 770 1429988 - 1429954 - g 75 -12.9 -3.35679 | TCGCCGCATCGAGAA CGTCACCGCTGCC TGGCACTTT GTCAGCGGTGACG ACAGCGGAGTAACCG JTY_1313 1429571 - 1431157 + | putative dehydrogenase FAD flavoprotein gmc oxidoreductase oppA 1432949 - 1431174 - | putative periplasmic oligopeptide-binding lipoprotein TERM 771 1432006 - 1432024 + g 74 -10.2 -3.87364 | overlap 1432007 AGCTGGTCCAGTGTG CCGACGCC GGT GGCGTCGA TTGTGTTGTTCTGCA TERM 772 1432007 - 1432023 + g 71 -13.7 -2.91696 | overlap 1432006 GCTGGTCCAGTGTGC CGACGCC GGT GGCGTCG ATTGTGTTGTTCTGC oppD 1434780 - 1432942 - | putative oligopeptide-transport ATP-binding protein ABC transporter TERM 773 1433739 - 1433774 + g 75 -9.6 -4.08767 | gap 1, opp_overlap 1433723 GTACCCGCACGACCA CCGAGGCGTCGCCGAGT GCA GCCGGGCGG-GCCTCGG TTTTGACCCGGTAGA TERM 774 1434037 - 1434021 - G 78 -10.1 -4.14739 | GGACCGAGCCTAAAA GCCCCAC GGT GTAGGGC ATCCGGCGATCGCGG oppC 1435652 - 1434777 - | putative oligopeptide-transport integral membrane protein ABC transporter oppB 1436626 - 1435649 - | putative oligopeptide-transport integral membrane protein ABC transporter TERM 775 1436580 - 1436567 - G 70 -2.3 -4.63527 | overlap 1436568 GCAGTACGTCAAAAA CGACG CCAG CGCCA GCAGCACCAGGTAGT canA 1436833 - 1437324 + | beta-carbonic anhydrase cysD 1437418 - 1438416 + | sulfate adenylyltransferase subunit 2 TERM 776 1439259 - 1439271 + G 70 -10.5 -3.65351 | opp_overlap 1439254 GTGGCAGAAGCGTTT CCGCC GAT GGCGG TTTCGGTGCGGCTCG cysN 1438416 - 1440260 + | sulfate adenylyltransferase subunit 1 JTY_1321 1440314 - 1440799 + | hypothetical protein JTY_1322 1440857 - 1442074 + | hypothetical protein JTY_1323 1442123 - 1442755 + | hypothetical protein JTY_1324 1444459 - 1442894 - | hypothetical protein TERM 777 1443618 - 1443642 + g 70 -8.5 -3.91897 | overlap 1443610 1443619 CTGGCTGCCGCCAAT TCGGCGATGTC GTC GACGTCGACGG TTTGTAGGTAACCCG TERM 778 1443675 - 1443707 + g 72 -14.2 -2.97245 | gap 1, opp_overlap 1443673, overlap 1443670 1443677 1443679 TGCGGGGCCAACAGC GGCACCGCATCAGCC GGGG GGCTGG-GCGGTGTC TCTACTTGTCGATCC TERM 779 1443677 - 1443705 + g 70 -13.2 -3.03741 | gap 1, opp_overlap 1443673, overlap 1443675 1443670 1443679 CGGGGCCAACAGCGG CACCGCATCAGCC GGGG GGCTGG-GCGGTG TCTCTACTTGTCGAT JTY_1325 1444470 - 1444784 + | hypothetical protein TERM 780 1444852 - 1444909 + T 70 -10.6 -3.65351 | gap 1, opp_overlap 1444861 1444862, overlap 1444854 1444855 CCGTACGTCACCCTT GATCGACAAGTGCGGATGTGGGGACCC GTCCG GGGTCCCCACAT-CGTGGTGGTCGCTG TTTAGCTCGAGGTCA TERM 781 1444854 - 1444907 + T 76 -13.2 -3.40775 | gap 1, opp_overlap 1444861 1444862, overlap 1444852 1444855 GTACGTCACCCTTGA TCGACAAGTGCGGATGTGGGGACCC GTCCG GGGTCCCCACAT-CGTGGTGGTCGC TGTTTAGCTCGAGGT TERM 782 1444855 - 1444906 + T 80 -16.7 -2.64144 | gap 1, opp_overlap 1444861 1444862, overlap 1444854 1444852 TACGTCACCCTTGAT CGACAAGTGCGGATGTGGGGACCC GTCCG GGGTCCCCACAT-CGTGGTGGTCG CTGTTTAGCTCGAGG JTY_1326 1445246 - 1444911 - | hypothetical secreted protein TERM 783 1446852 - 1446819 - g 81 -14.5 -3.53224 | gap 1, opp_overlap 1446819 CATCGCCCGGCTAAA GGCCGCGGCCGCCGCC TTC GGTGACGACC-CGGCC ACCGTCGAGGTGCTC argS 1445791 - 1447443 + | arginyl-tRNA synthetase TERM 784 1448330 - 1448375 + G 72 -11.7 -3.50393 | gap 1, overlap 1448317 GCCGACGCCCAAGCT CGTTGTGGAGCCCGGACGCGCC ATC GCCG-GACCGGGCACCATCACG TTGTATGAGGTCGGC lysA 1447440 - 1448783 + | putative diaminopimelate decarboxylase thrA 1448787 - 1450112 + | homoserine dehydrogenase thrC 1450109 - 1451191 + | threonine synthase TERM 785 1451845 - 1451859 + G 72 -7 -4.21194 | opp_overlap 1451846, overlap 1451846 AGGGTCATCCCGACA ACGCGG CGG CCGCGG TTTTGGGTGGTGCCG thrB 1451409 - 1452359 + | homoserine kinase TERM 786 1452599 - 1452576 - f 72 -3.8 -4.65916 | gap 1 CTGACTGCAACAAAA CCCCGTATGAC GTG ATCAG-CGGGG GAAGGAAAGGAAATC TERM 787 1452875 - 1452830 - g 71 -14 -2.80816 | overlap 1452833 CTGCGATTGAGGAGA TCAGGCGACAGGCCAACGGC GCCCCA GCCGTTGACCGGTCGGCTCA AGAGCACGACAAGGG TERM 788 1452872 - 1452833 - g 74 -15.7 -2.66964 | overlap 1452830 CGATTGAGGAGATCA GGCGACAGGCCAACGGC GCCCCA GCCGTTGACCGGTCGGC TCAAGAGCACGACAA TERM 789 1452925 - 1452888 - g 70 -11.9 -3.47307 | gap 1 TCAAGAGCACGACAA GGGCGACCGGCCGCCCAG TTC CGAGGCA-CCGGCCACCC AGGGGGAACAGACCC rho 1452616 - 1454424 + | transcription termination factor rpmE 1454575 - 1454817 + | 50S ribosomal protein L31 prfA 1454907 - 1455980 + | peptide chain release factor 1 hemK 1455977 - 1456954 + | putative HemK protein homolog JTY_1336 1456970 - 1457623 + | hypothetical protein TERM 790 1458361 - 1458379 + G 79 -7.4 -4.46212 | TCGGTGGGTTTGCTT CGTGACCA CGG TGGTGACG TTTTGTACTACCCGC rfe 1457707 - 1458921 + | putative undecapaprenyl-phosphate alpha-N-acetylglucosaminyltransferase JTY_1338 1459178 - 1459663 + | hypothetical protein atpB 1459656 - 1460408 + | ATP synthase subunit A TERM 791 1460524 - 1460559 + G 74 -12.6 -3.51365 | gap 1 CCGGTGGCGCCATCG GCGCCGGTATCGGTGAC GGT GTCGCCGGTAACG-CGC TTATCTCCGGTGTCG atpE 1460457 - 1460702 + | ATP synthase subunit C atpF 1460733 - 1461248 + | FOF1 ATP synthase B chain atpH 1461255 - 1462595 + | putative ATP synthase delta chain atpA 1462640 - 1464289 + | FOF1 ATP synthase subunit alpha atpG 1464296 - 1465213 + | ATP synthase subunit gamma TERM 792 1466701 - 1466687 - g 82 -11.4 -4.1552 | opp_overlap 1466695 GACCTGGCCAAGAAA GCCGAG AGT CTCGGC GCCAAGCTGTGACGG atpD 1465253 - 1466713 + | FOF1 ATP synthase subunit beta atpC 1466727 - 1467092 + | FOF1 ATP synthase subunit epsilon TERM 793 1467098 - 1467136 + F 79 -13.9 -3.42574 | opp_overlap 1467093 GATCGACTAACCCGC CGATGAGCGTGCCCATG ATCGG CATGGTCGTGCTCGTCG TTGTCCTGGGATTGG JTY_1347 1467100 - 1467534 + | hypothetical secreted protein JTY_1348 1468915 - 1467581 - | putative transposase JTY_1349 1469662 - 1469081 - | hypothetical protein murA 1469731 - 1470987 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 794 1471155 - 1471194 + T 81 -7.1 -4.77173 | overlap 1471156 TTTTGTTGTTATTTT TGGCCATGCTCTTGATG CCCCGT TGTCGGGGGCGTGGCCG TTTGTTTTGTCAGGA TERM 795 1471229 - 1471247 + T 75 -11.8 -3.57389 | opp_overlap 1471222 1471220, overlap 1471227 1471238 TCTAAATACCTTTGG CTCCCTTT TCC AAAGGGAG TGTTTGGGTTTTGTT TERM 796 1472828 - 1472810 - T 91 -11.7 -4.32034 | GGAGCACCACGAAAA CGCCCCA ACTGG TGGGGCG TAGGCCGTGAGGGGT TERM 797 1472897 - 1472885 - T 76 -7.7 -4.35483 | overlap 1472887 GTGCATGACAACAAA GTTGG CCA CCAAC ACACTGTTGGGTCCT TERM 798 1473006 - 1473036 + T 74 -9.7 -3.93004 | overlap 1473009 GTTGCGAGCATCAAT GGATACGCTGCCG GCTAG CGGTGGCGTGTTC TTTGTGCAATATTCT TERM 799 1473009 - 1473033 + T 70 -7.8 -4.08279 | overlap 1473006 GCGAGCATCAATGGA TACGCTGCCG GCTAG CGGTGGCGTG TTCTTTGTGCAATAT TERM 800 1475100 - 1475089 - T 72 -2.2 -4.7254 | overlap 1475094 ACTGTTTACTAAAAA CACA GGTC CGTG CGAAGTCGCAAGACG TERM 801 1476422 - 1476461 + T 100 -21 -4.05033 | opp_overlap 1476424 1476432, overlap 1476432 TAGGACACCGCCGAA CATACAAAAACACCCCCG GTAA CGGTGGTGTTTTTGTATG TTTATATCGACTCAG TERM 802 1476459 - 1476424 - T 90 -17.8 -3.03771 | opp_overlap 1476422 1476432, overlap 1476432 GGACACCGCCGAACA TACAAAAACACCCCCG GTAA CGGTGGTGTTTTTGTA TGTTTATATCGACTC TERM 803 1476432 - 1476451 + T 100 -9.2 -5.1634 | opp_overlap 1476424 1476432, overlap 1476422 CCGAACATACAAAAA CACCCCCG GTAA CGGTGGTG TTTTTGTATGTTTAT TERM 804 1476451 - 1476432 - T 100 -9.2 -5.10064 | opp_overlap 1476432 1476422, overlap 1476424 CCGAACATACAAAAA CACCCCCG GTAA CGGTGGTG TTTTTGTATGTTTAT ogt 1477041 - 1476544 - | putative methylated-DNA--protein-cysteine methyltransferase alkA 1478528 - 1477038 - | putative ada regulatory protein JTY_1353 1480234 - 1478609 - | putative adenylate cyclase TERM 805 1478865 - 1478904 + g 77 -9.8 -3.90112 | opp_overlap 1478863 TTGCCGGCAATGACC TGCCCCGCCGCCACGCCG ATCC CGGCCTGGCACTCGGGCA TTTCGTTGACCAGCC JTY_1354 1481911 - 1480304 - | putative adenylate cyclase TERM 806 1481875 - 1481897 + g 77 -6.8 -4.57073 | overlap 1481874 1481878 TCGTCTCGAGTGCCT GGCCCAGGCG TTG CGCCATGGTC TTTTTCGCCGGCATG JTY_1355 1483627 - 1481924 - | putative adenylate cyclase JTY_1356 1483689 - 1484369 + | hypothetical protein TERM 807 1484427 - 1484410 - g 74 -12.7 -3.53012 | GCTCGGCGCCGCAAA CCGCTGC ACCG GCAGCGG CCGGAACCGCCGTCG JTY_1357 1484392 - 1484688 + | hypothetical protein JTY_1358 1485181 - 1484723 - | hypothetical protein TERM 808 1486067 - 1486051 - g 77 -7.9 -4.36411 | overlap 1486053 1486062 CATGAACCAGGAAAA GGCCCAG GAA CTGGGGC TGACCTGGCTAGCCG fadA4 1485272 - 1486441 + | acetyl-CoA acetyltransferase JTY_1360 1486571 - 1487485 + | putative thioredoxin TERM 809 1487504 - 1487545 + T 100 -30.5 -2.79183 | opp_overlap 1487504 1487511, overlap 1487511 CGGCTGGCGAGCAGA CGCAGAATCGCCTAAACCC GCAC GGGTTTAGGCGATTCTGCG TCTGCTCGCGCTGGG TERM 810 1487545 - 1487504 - T 100 -30.5 -2.78384 | opp_overlap 1487504 1487511, overlap 1487511 CGGCTGGCGAGCAGA CGCAGAATCGCCTAAACCC GCAC GGGTTTAGGCGATTCTGCG TCTGCTCGCGCTGGG TERM 811 1487538 - 1487511 - T 95 -18.6 -3.40299 | opp_overlap 1487504 1487511, overlap 1487504 CGAGCAGACGCAGAA TCGCCTAAACCC GCAC GGGTTTAGGCGA TTCTGCGTCTGCTCG TERM 812 1487511 - 1487538 + T 95 -18.6 -3.40299 | opp_overlap 1487511 1487504, overlap 1487504 CGAGCAGACGCAGAA TCGCCTAAACCC GCAC GGGTTTAGGCGA TTCTGCGTCTGCTCG PE_PGRS24 1489366 - 1487564 - | PE-PGRS family protein glgB 1491713 - 1489518 - | glycogen branching enzyme glgE 1493826 - 1491721 - | putative glucanase glgP 1493965 - 1496556 + | putative glycogen phosphorylase TERM 813 1496613 - 1496568 - T 91 -17.2 -3.29511 | gap 1, opp_overlap 1496570 1496577, overlap 1496577 CTGACCCGCCGAGAA GACGCAAAAGCTC-CTAAATC TGGCC GATTTAGTGGGCTTTTGCGTC TGCTCGCGCAAGGCG TERM 814 1496570 - 1496611 + T 81 -16.2 -2.78384 | gap 1, opp_overlap 1496568 1496577, overlap 1496577 GACCCGCCGAGAAGA CGCAAAAGCTC-CTAAATC TGGCC GATTTAGTGGGCTTTTGCG TCTGCTCGCGCAAGG TERM 815 1496577 - 1496604 + T 71 -5.7 -4.24948 | gap 1, opp_overlap 1496568 1496577, overlap 1496570 CGAGAAGACGCAAAA GCTC-CTAAATC TGGCC GATTTAGTGGGC TTTTGCGTCTGCTCG dinG 1498590 - 1496596 - | putative ATP-dependent helicase DinG homolog TERM 816 1496856 - 1496830 - G 72 -13.6 -3.15544 | GGCGACCGTCATGAA GCCGTTGCCGCC ACG GGCGGCCACCGC ACGCTGGCGGGCACT JTY_1366 1499960 - 1498614 - | nicotinate phosphoribosyltransferase TERM 817 1498814 - 1498796 - G 71 -13.8 -2.82623 | overlap 1498793 GCGGCTCGACAATGA CCGGCGGA CGG CCCGCCGG ATGCACGAGCTCCTC clpS 1500062 - 1500367 + | ATP-dependent Clp protease adaptor protein JTY_1368 1500327 - 1500983 + | putative transcriptional regulatory protein JTY_1369 1501000 - 1502034 + | putative hydrolase JTY_1370 1502042 - 1502482 + | hypothetical protein JTY_1371 1502504 - 1502785 + | 9.5 kDa culture filtrate antigen cfp10A cysM 1502795 - 1503766 + | putative cysteine synthase B TERM 818 1504085 - 1504098 + G 75 -9.5 -4.03234 | TTCTTATGACGCTGG CCGGG CTGT CCCGG TTTGTCTGGGCCACC JTY_1373 1503757 - 1504479 + | putative integral membrane protein murI 1504476 - 1505291 + | glutamate racemase TERM 819 1505878 - 1505903 + G 77 -7.6 -4.34402 | gap 1 CATTTGTGACCAGCT CGTCGA-GCTG GCTCG CGGCGTCGACG TTTTCCTCTGCGAGG JTY_1375 1505318 - 1506139 + | hypothetical protein rph 1506156 - 1506935 + | ribonuclease JTY_1377 1506974 - 1507588 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 820 1507602 - 1507590 - T 70 -10.5 -3.63627 | opp_overlap 1507589 1507583 1507581 1507590 TGGCGACAGGCTAAA GCCCG AAG CGGGC CTTGATCTCTTTGGT JTY_1378 1507947 - 1507585 - | hypothetical protein lprD 1508324 - 1507944 - | putative lipoprotein JTY_1380 1508369 - 1508689 + | acyl carrier protein fadD33 1508682 - 1510247 + | acyl-CoA synthetase fadE14 1510247 - 1511407 + | putative acyl-CoA dehydrogenase JTY_1383 1512006 - 1511374 - | hypothetical protein JTY_1384 1512448 - 1515027 + | putative drugs-transport transmembrane ATP-binding protein ABC transporter TERM 821 1515427 - 1515468 + G 77 -15.9 -3.05521 | gap 1 ATCTGGTGACACCGT TGACCAGCGCGATC-CTGCT GCC GGCAGTGATCGCGCTGGCCC TGTTGCCGATCTCCT JTY_1385 1515024 - 1516763 + | putative drugs-transport transmembrane ATP-binding protein ABC transporter fabG 1516892 - 1517635 + | 3-ketoacyl-(acyl-carrier protein) reductase JTY_1387 1517632 - 1517961 + | hypothetical protein JTY_1388 1518164 - 1518535 + | hypothetical protein JTY_1389 1519386 - 1518601 - | putative transcriptional regulatory protein JTY_1390 1521277 - 1519406 - | hypothetical protein TERM 822 1520107 - 1520060 - G 76 -14.8 -3.20382 | overlap 1520063 GGCCACAGGGATGAA GCAGCCCGGTGCCAGCAGCCCA CGGG TGGGGTGCTGCCACCGGACCAA TGCCTCGGTCCCGAC TERM 823 1520104 - 1520063 - G 100 -20.9 -2.79574 | overlap 1520060 CACAGGGATGAAGCA GCCCGGTGCCAGCAGCCCA CGGG TGGGGTGCTGCCACCGGAC CAATGCCTCGGTCCC moeY 1523433 - 1521286 - | hypothetical protein JTY_1392 1524221 - 1523430 - | hypothetical protein TERM 824 1524422 - 1524380 - R 78 -12 -3.75461 | CAAATTGTCACGAAA TCGTGCGCACGCGCGT TCACAAATACC ACGCGCACGCGCTCGA AAACTACATGACCAG JTY_1393 1525617 - 1524694 - | hypothetical protein TERM 825 1527564 - 1527578 + G 71 -9.2 -3.88583 | opp_overlap 1527552 GAACGGATCCTGTTC CGCCGC CTT GCGGTG TTTGTGGGCGGTTTC TERM 826 1527599 - 1527652 + G 84 -16.8 -3.14136 | gap 2, opp_overlap 1527615, overlap 1527601 1527615 GGGCGGTTTCGACCT CACCGCGGCGAGCGAAGTCGCCGCCG CCGG CGGCGACGACTTCG-TCGA-GCGGTA TTCAGTGCTTGATCA TERM 827 1527601 - 1527650 + G 100 -19.4 -3.12862 | gap 2, opp_overlap 1527615, overlap 1527599 1527615 GCGGTTTCGACCTCA CCGCGGCGAGCGAAGTCGCCGCCG CCGG CGGCGACGACTTCG-TCGA-GCGG TATTCAGTGCTTGAT TERM 828 1527615 - 1527638 + G 73 -13.8 -3.14683 | opp_overlap 1527615, overlap 1527601 1527599 ACCGCGGCGAGCGAA GTCGCCGCCG CCGG CGGCGACGAC TTCGTCGAGCGGTAT TERM 829 1527635 - 1527615 - g 86 -18.3 -3.05463 | opp_overlap 1527615 1527601 1527599 ACCGCGGCGAGCGAA GTCGCCGCC GCC GGCGGCGAC GACTTCGTCGAGCGG JTY_1394 1526013 - 1529492 + | putative transcriptional regulatory protein TERM 830 1529504 - 1529471 - f 74 -14.6 -2.63631 | CCAACTTGTACAGGA GGCCGCGCAACACT CGACCT AGGATTGCGCGGCC AGCGCAGGCCCGGAG JTY_1395 1529574 - 1530326 + | putative transcriptional regulatory protein TERM 831 1530477 - 1530435 - f 84 -16.2 -3.08371 | GACATTCGCAAGAGA GCGTGCTCGCCCACTCCCTG CGG CAAGGTGTAGGCCAGCTCGC GCAACTTAACCGCGC JTY_1396 1530749 - 1531771 + | putative oxidoreductase PPE19 1533034 - 1531844 - | PPE family protein TERM 832 1532180 - 1532136 - G 79 -13.6 -3.66844 | gap 1, overlap 1532140 CCCAGACCTGAAGAA CCCAGCGACGAACCCAGCTGG CTGC CCAGC-GAGCTCATCGCCTGG ACCCCGTTTTGCGCC TERM 833 1533248 - 1533224 - R 76 -9.2 -3.97019 | opp_overlap 1533223 1533224 1533241 ACTAATCTTAAATAA CCCGGCCGAT TAGAC AGCGGCCGAG ATCTGTTTGAGGTCG JTY_1398 1534011 - 1533349 - | hypothetical protein TERM 834 1533522 - 1533536 + g 72 -7.1 -4.21676 | ACACGGCCGCGCGCA CCACC TTGGC GGTGG TTTTCAGTGACTTCT JTY_1399 1534793 - 1534008 - | hypothetical protein JTY_1400 1537045 - 1535084 - | hypothetical protein TERM 835 1537003 - 1537017 + g 75 -7 -4.38712 | TGCGTCGTACATCCT CGGCCG CAC CGACCG TTTTGTCCCAGTCCA JTY_1401 1537570 - 1537184 - | hypothetical protein JTY_1402 1537791 - 1538612 + | hypothetical protein JTY_1403 1540046 - 1538913 - | hypothetical protein TERM 836 1539396 - 1539363 - G 89 -18.1 -3.40403 | opp_overlap 1539381 1539384, overlap 1539333 1539384 GGCGGTCGACCACAA CCCGCCGCCGGCGTT ACAG AACGACGGCGGCGTG ACGTGTGGCGGCCCC TERM 837 1539381 - 1539434 + g 70 -10.2 -3.71848 | gap 1, opp_overlap 1539363 1539384, overlap 1539384 GCCGCCGGCGTTACA GAACGACGGCGGCGTGACGTG-TGG CGGCC CCATCACGTCGTGCCGCAACCGGTC TTGTTCGTCGAGCCG TERM 838 1540589 - 1540547 - g 87 -6.9 -5.00616 | gap 2 GGGTGCGGGAAAAAA CCGACCACGGCGAGCTCCCCG AGT CCCGG-G-TCGCCGTCGCCGG AAGCCCAGCAGATCC lprF 1540421 - 1541206 + | putative lipoprotein JTY_1405 1541402 - 1542355 + | hypothetical protein JTY_1406 1541877 - 1542872 + | hypothetical protein JTY_1407 1542869 - 1544050 + | hypothetical protein JTY_1408 1544056 - 1544604 + | glycolipid sulfotransferase JTY_1409 1544571 - 1545038 + | glycolipid sulfotransferase JTY_1410 1545576 - 1545118 - | hypothetical protein TERM 839 1545846 - 1545856 + H 71 -5.4 -4.41348 | opp_overlap 1545840 GAAAGCCAAGCGCTC TACG CCG CGTA TTTCTTTGCGGCCGA JTY_1411 1545878 - 1547197 + | hypothetical protein JTY_1413 1549263 - 1548625 - | putative transferase JTY_1412 1547194 - 1548687 + | hypothetical protein JTY_1414 1550701 - 1549274 - | hypothetical protein pyrR 1550700 - 1551281 + | pyrimidine regulatory protein pyrB 1551278 - 1552237 + | aspartate carbamoyltransferase catalytic subunit pyrC 1552234 - 1553526 + | dihydroorotase JTY_1418 1553523 - 1554020 + | putative export or membrane protein carA 1554017 - 1555147 + | putative carbamoyl phosphate synthase small subunit carB 1555147 - 1558494 + | carbamoyl phosphate synthase large subunit pyrF 1558491 - 1559315 + | orotidine 5'-phosphate decarboxylase TERM 840 1559578 - 1559608 + G 90 -15.3 -3.86015 | AGCAGTGACCGCTCG CCTGGCCGCCGCG CACGC CGCGGCGGCCCCG TTTATCGCGGCGGTC PE15 1559510 - 1559818 + | PE family protein TERM 841 1560178 - 1560191 + G 74 -5.3 -4.44046 | ATCAAGCTCGCGGTG TTGGT AGCG ACCAA TTTCTTTGGCATCAA TERM 842 1560572 - 1560585 + G 87 -6.7 -5.03715 | CGATCTGGTGGCTGG CTCGA GGCC TCGAG TTTTTTCAGGATGGT TERM 843 1560934 - 1560992 + G 86 -16.6 -3.55622 | gap 3 CTCCCCGCCTCAGCA CCCG-CACCGGCGGCAGC-GGCCGGC-GC CACC GCAGCCGGCCCGACGCCGCCGGCGACTGG TTTCGGAGGCTTCCC TERM 844 1561172 - 1561211 + G 89 -17.2 -3.53012 | opp_overlap 1561174, overlap 1561176 GCTCGGCGGCGAAGG CACGTGGCCATCGTGACG AATT CGTCACGATGGACATGGG TTTCGACGCGGCAGC TERM 845 1561209 - 1561174 - g 77 -16.2 -2.52464 | opp_overlap 1561172 1561176 TCGGCGGCGAAGGCA CGTGGCCATCGTGACG AATT CGTCACGATGGACATG GGTTTCGACGCGGCA TERM 846 1561176 - 1561207 + G 80 -17.4 -2.64155 | opp_overlap 1561174, overlap 1561172 GGCGGCGAAGGCACG TGGCCATCGTGACG AATT CGTCACGATGGACA TGGGTTTCGACGCGG PPE20 1559815 - 1561434 + | PPE family protein mihF 1561740 - 1562312 + | putative integration host factor TERM 847 1562778 - 1562721 - g 100 -24 -3.89614 | opp_overlap 1562733 1562758 1562777, overlap 1562722 TGGAATGGGCAGAAA TCCACGGCGGCCTGCACCGGTCGGGC ACTTTG GCCCAGCCGGTGCGGGCGGCCGCGGC GACTGGTGTGCCGGT TERM 848 1562777 - 1562722 - g 100 -27.5 -2.93447 | opp_overlap 1562733 1562758, overlap 1562721 GGAATGGGCAGAAAT CCACGGCGGCCTGCACCGGTCGGGC ACTTTG GCCCAGCCGGTGCGGGCGGCCGCGG CGACTGGTGTGCCGG gmk 1562447 - 1563073 + | guanylate kinase rpoZ 1563139 - 1563471 + | DNA-directed RNA polymerase subunit omega dfp 1563487 - 1564743 + | putative bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase metK 1564871 - 1566082 + | S-adenosylmethionine synthetase TERM 849 1566143 - 1566102 - T 100 -31.9 -2.78596 | opp_overlap 1566102 1566109, overlap 1566109 GAGGGCGCGAGCAGA CGCAGAATCGCACGCGGAA AGGC TTCCGCGTGCGATTCTGCG TCTGCTCGGCGCTAG TERM 850 1566102 - 1566143 + T 100 -31.9 -2.78816 | opp_overlap 1566102 1566109, overlap 1566109 GAGGGCGCGAGCAGA CGCAGAATCGCACGCGGAA AGGC TTCCGCGTGCGATTCTGCG TCTGCTCGGCGCTAG TERM 851 1566136 - 1566109 - T 100 -20 -3.40299 | opp_overlap 1566102 1566109, overlap 1566102 CGAGCAGACGCAGAA TCGCACGCGGAA AGGC TTCCGCGTGCGA TTCTGCGTCTGCTCG TERM 852 1566109 - 1566136 + T 100 -20 -3.40299 | opp_overlap 1566109 1566102, overlap 1566102 CGAGCAGACGCAGAA TCGCACGCGGAA AGGC TTCCGCGTGCGA TTCTGCGTCTGCTCG JTY_1429 1567633 - 1566155 - | monooxygenase cyp132 1569015 - 1567630 - | putative cytochrome P450 132 TERM 853 1567886 - 1567858 - G 83 -8.7 -4.62069 | overlap 1567877 GGGGCACCGCAAAAA CCGGCCAGGATCG AAT CTATCCGGGTCGG GCCACCAGCGCGGGT JTY_1431 1569093 - 1570127 + | putative transcriptional regulatory protein PE_PGRS25 1571531 - 1570173 - | PE-PGRS family protein TERM 854 1570925 - 1570881 - G 89 -17.7 -3.28712 | overlap 1570882 1570921 TCCGCTGCCCCACAA TCCGGCGGCGCCGCCGGCACC GCC GGCACCGCCGACACCACCGGG GTCGCCGGCCACCCC TERM 855 1570924 - 1570882 - G 100 -21.2 -2.57132 | overlap 1570881 1570921 CCGCTGCCCCACAAT CCGGCGGCGCCGCCGGCACC GCC GGCACCGCCGACACCACCGG GGTCGCCGGCCACCC JTY_1433 1572187 - 1571786 - | hypothetical protein JTY_1434 1572441 - 1572184 - | hypothetical protein lipH 1573483 - 1572524 - | putative lipase lipI 1574470 - 1573508 - | putative lipase TERM 856 1573929 - 1573915 - G 79 -11.4 -3.83347 | ACAGCTGAAACACAA TGGGCG GGC CGCCCA TATCGCGGGCTCGCT JTY_1437 1574604 - 1575206 + | hypothetical protein TERM 857 1575697 - 1575719 + G 74 -12.6 -3.53444 | CCTGGCCGCGCTGGC CGACTCGCGC GCT GCGCGGGCCG TTTGGCAGGCGCTAC priA 1575287 - 1577254 + | primosomal assembly protein JTY_1439 1578096 - 1577272 - | putative methyltransferase JTY_1440 1578265 - 1578747 + | putative transcriptional regulatory protein TERM 858 1578752 - 1578777 + T 71 -12.5 -3.09516 | gap 1, opp_overlap 1578744 1578741 AAATCGAGTAGCTAG CGGCCGAGCCCG TGT CGGGC-CGTCCG TTACGTGCTGGGACG JTY_1441 1579643 - 1578819 - | putative methyltransferase fmt 1579840 - 1580778 + | methionyl-tRNA formyltransferase fmu 1580775 - 1582148 + | putative fmu protein rpe 1582173 - 1582871 + | ribulose-phosphate 3-epimerase ribG 1582868 - 1583887 + | putative riboflavin biosynthesis protein JTY_1446 1585440 - 1583884 - | aminoglycosides/tetracycline-transport integral membrane protein lprG 1586156 - 1585446 - | putative lipoprotein ribC 1586241 - 1586846 + | riboflavin synthase subunit alpha JTY_1449 1587060 - 1587575 + | hypothetical protein JTY_1450 1587565 - 1587966 + | hypothetical protein ribA2 1588071 - 1589348 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase ribH 1589363 - 1589827 + | riboflavin synthase subunit beta JTY_1453 1589824 - 1590288 + | hypothetical protein lprH 1590313 - 1590999 + | putative lipoprotein JTY_1455 1591179 - 1591652 + | hypothetical protein uvrC 1591716 - 1593656 + | excinuclease ABC subunit C JTY_1457 1593653 - 1594558 + | hypothetical protein JTY_1458 1594555 - 1595583 + | hypothetical protein TERM 859 1596268 - 1596316 + G 100 -21 -2.53382 | gap 2 TCGACGACGCCAATC TGCGCCGCTCGGCGCGGGCCGCGG TTG CCGCGGC-CGC-CCGGGTGGAGCG TGCCTTGGAGATCCT whiA 1595580 - 1596557 + | putative transcriptional regulatory protein JTY_1460 1597328 - 1596567 - | hypothetical protein TERM 860 1597548 - 1597574 + G 70 -10.8 -3.59979 | GACCGGCCGTGGTTC GTCGAGGACGAG GAA CTCGACATCGAC TTTCACATCCGCCGC JTY_1461 1597332 - 1598711 + | hypothetical protein lipO 1599995 - 1598733 - | putative esterase TERM 861 1599248 - 1599270 + g 77 -7.6 -4.4078 | overlap 1599250 TGGCAACGAAATTCG GATCCCCGCC GTA GGCGGCGATG TTTTCCTTGACCCAC TERM 862 1599250 - 1599268 + g 74 -10.2 -3.8125 | overlap 1599248 GCAACGAAATTCGGA TCCCCGCC GTA GGCGGCGA TGTTTTCCTTGACCC fadD12 1601602 - 1599995 - | acyl-CoA synthetase TERM 863 1600673 - 1600697 + g 75 -11.4 -3.63627 | opp_overlap 1600656 CGACGCGGCGGCGAA CCGCAACGAC CGGCC GTCGTAGCGG TTTCGAATCTCGGCC JTY_1464 1602433 - 1601606 - | hypothetical protein TERM 864 1603447 - 1603485 + G 79 -11.7 -3.80133 | gap 2, opp_overlap 1603427 1603425, overlap 1603465 1603465 AACGAGTGAAGGCGT TGGCCCTGGCCGGTGGCGC CCG GC-CCGGCGGCC-GGGTCA TGTTTTATGACGATG TERM 865 1603465 - 1603482 + G 72 -14.1 -2.98387 | overlap 1603447 1603465 CCCTGGCCGGTGGCG CCCGGCC CGGC GGCCGGG TCATGTTTTATGACG TERM 866 1603465 - 1603487 + G 75 -6.8 -4.39426 | overlap 1603465 1603447 CCCTGGCCGGTGGCG CCCGGCCCGG CGG CCGGGTCATG TTTTATGACGATGTC JTY_1465 1602552 - 1603820 + | hypothetical protein TERM 867 1603987 - 1603950 - f 78 -10.5 -3.97834 | gap 1, overlap 1603938 1603951 1603954 CAACCCGACCAGAAA GCCAGCCGGGTCCGCC AGAGGGG GGCGGACCCGGC-GTA TACCCAATTCGCGTC TERM 868 1603986 - 1603951 - f 75 -14 -2.98219 | gap 1, overlap 1603938 1603950 1603954 AACCCGACCAGAAAG CCAGCCGGGTCCGCC AGAGGGG GGCGGACCCGGC-GT ATACCCAATTCGCGT TERM 869 1603984 - 1603954 - f 91 -21.2 -2.72152 | overlap 1603938 1603951 1603950 CCGACCAGAAAGCCA GCCGGGTCCGCC AGAGGGG GGCGGACCCGGC GTATACCCAATTCGC PE16 1604060 - 1605646 + | PE family protein TERM 870 1606393 - 1606422 + G 89 -5.7 -5.15969 | CTTGCCGCCCGCGGC GAACACTACTGGC TGAA GCTATTCGTGTTC TTTTTTCCCTTCACC JTY_1467 1605757 - 1607526 + | hypothetical protein JTY_1468 1607523 - 1608944 + | putative dehydrogenase JTY_1469 1609108 - 1609929 + | hypothetical protein JTY_1471 1610644 - 1610015 - | putative proline, glycine, valine-rich secreted protein JTY_1470 1609929 - 1610066 + | hypothetical protein TERM 871 1610085 - 1610059 - Gf 72 -12.2 -3.30619 | AAGGACCGGGCAGAA CCGGCTGACCAG GCA CCGGTCCGCCAG CTGGCGCCGGATCGG gap 1611001 - 1612020 + | putative glyceraldehyde 3-phosphate dehydrogenase pgk 1612023 - 1613261 + | phosphoglycerate kinase TERM 872 1613960 - 1613926 - g 79 -7 -4.66833 | overlap 1613928 GGTGAACGCCAAAAA CGTCGGCGACATCGTG GCC CAGGATGACGTCGATG GTGGCCTGGTCGGCG tpiA 1613258 - 1614043 + | triosephosphate isomerase JTY_1475 1615080 - 1614655 - | hypothetical protein secG 1615531 - 1615764 + | preprotein translocase subunit PE_PGRS26 1617378 - 1615903 - | PE-PGRS family protein TERM 873 1616205 - 1616161 - G 79 -16.2 -2.87344 | GAGGCTTTCGATATA GCCGCCGGTGCCGCCGGTGC CGCCT GCGCCGCCAGCGCCGCCGGC GCCGGCGCTGCTGCC TERM 874 1617268 - 1617220 - G 75 -7.2 -4.33182 | opp_overlap 1617248, overlap 1617217 1617221 GTAGCCAGAAAACAA CGACGCGATGGCCGCCGACACC TCATC GGCCCCGGCGGCCAGGACACCA GCCGTCGTGGGTGCC bisC 1617485 - 1619785 + | putative biotin sulfoxide reductase JTY_1479 1620386 - 1619901 - | hypothetical protein TERM 875 1620306 - 1620346 + g 75 -11.7 -3.6715 | overlap 1620308 GCCCTCCGGGGTGAC GACCCGTTGCCACACCTGC TCG GCAGGTGCGGCGACGACGC TTTGCCGTTCAATGA TERM 876 1620708 - 1620733 + r 76 -6.1 -4.55689 | gap 1, overlap 1620683 1620681 1620708 1620709 1620711 AGCTACTGATTCCGC G-CAGCTGCTCT GTC AGGGCCGCTGAC TTTTCTCTCGGTCAT JTY_1480 1621403 - 1620993 - | hypothetical protein devB 1622163 - 1621420 - | putative 6-phosphogluconolactonase TERM 877 1621554 - 1621506 - G 70 -10.3 -3.64703 | gap 3 CCGCCGGTACCGAAA CCGGAT-CGG-CGCCGCCGATGGC CGCG GCCA-CGGCGTCGGCCTTACCCGG CCCGGAAACCAGCAG opcA 1623071 - 1622160 - | putative OxpP cycle protein TERM 878 1622825 - 1622796 - G 73 -9.1 -3.99324 | opp_overlap 1622798 1622823 CCGCAGCACCACAAA CTCGCCGGCGCCG GCGT CAGCGCCGACCCG CAGTTGTGCGTCCAG zwf2 1624668 - 1623124 - | glucose-6-phosphate 1-dehydrogenase tal 1625786 - 1624665 - | transaldolase TERM 879 1625185 - 1625175 - G 75 -3.2 -4.8048 | CCGGGAGACGAAAAA CGAT GCC ACCG AATGGATCTTGGACA tkt 1627905 - 1625803 - | transketolase TERM 880 1626744 - 1626724 - G 71 -12.5 -3.30159 | opp_overlap 1626692 CGAACCGCCCCACAA CTCGGGCAG TTT CGGCCCGAG CGCGGACAGCACCGC PE_PGRS27 1632543 - 1628344 - | PE-PGRS family protein TERM 881 1629469 - 1629513 + g 80 -15.6 -3.28712 | gap 1 GCCGTTGCCGCCGGC CCCGCCGTTGCC-GCCGGCGC CGCC GTGCCCGCCGGCACCGCCGGG TTGTCCGGGCGCACC TERM 882 1631049 - 1631003 - G 75 -13.7 -3.28712 | gap 2, overlap 1631004 GGGTCGCCGCCAGAA GGCGGGGCACCGGGGGCGCCG TTGCCGC CGGCACCTCCGGCG-CC-GCC GTTGCCGACCAGCCC TERM 883 1631051 - 1631004 - G 77 -16.2 -2.57132 | gap 1, overlap 1631003 GGTCGCCGCCAGAAG GCGG-GGCACCGGGGGCGCCG TTGCCGC CGGCACCTCCGGCGCCGCCGT TGCCGACCAGCCCGC TERM 884 1631499 - 1631485 - G 77 -7 -4.48741 | overlap 1631486 CAAGGCACGAGAAAA TCCGGC CCC GCCGGC CCCGCCGGTCCCGCC TERM 885 1632102 - 1632049 - G 100 -19.4 -3.61398 | gap 1, overlap 1632050 GCCGGTGCCGAACAA CCCGGCGGCCCCGCCG-GCCCCGCC GACTT GGCCGGGCGCGCCCGAGCCGCCGGC CCCACCGTTGCCCCA TERM 886 1632101 - 1632050 - G 100 -22.9 -2.76696 | gap 1, overlap 1632049 CCGGTGCCGAACAAC CCGGCGGCCCCGCCG-GCCCCGCC GACTT GGCCGGGCGCGCCCGAGCCGCCGG CCCCACCGTTGCCCC ctaB 1632945 - 1633871 + | protoheme IX farnesyltransferase PE_PGRS28 1636142 - 1633920 - | PE-PGRS family protein TERM 887 1634237 - 1634274 + g 89 -16.9 -3.53012 | gap 1 CGTCGCCGCCGGCTC CGGCGGTGCCGTC-GCCG CCC TGGCCGCCGGCCCCGCCG TTTCCGCCGCCGCCG TERM 888 1634368 - 1634419 + g 79 -16.4 -2.87931 | overlap 1634370 CTGGCGCCGGTGCCG CCGGGTGCAACGGCGTTGGCGCCG TTAC CGCCGTTGCCGCCTTTGCCCCCGG TGTCTGCAAAGTCGG TERM 889 1634370 - 1634408 + g 72 -11.6 -3.54129 | overlap 1634368 GGCGCCGGTGCCGCC GGGTGCAACGGCGTTGGC GCC GTTACCGCCGTTGCCGCC TTTGCCCCCGGTGTC TERM 890 1635701 - 1635648 - G 100 -19.4 -3.61398 | gap 1, overlap 1635649 GCCGGTGCCGAACAA CCCGGCGGCCCCGCCG-GCCCCGCC GACTT GGCCGGGCGCGCCCGAGCCGCCGGC CCCACCGTTGCCCCA TERM 891 1635700 - 1635649 - G 100 -22.9 -2.76696 | gap 1, overlap 1635648 CCGGTGCCGAACAAC CCGGCGGCCCCGCCG-GCCCCGCC GACTT GGCCGGGCGCGCCCGAGCCGCCGG CCCCACCGTTGCCCC JTY_1489 1636294 - 1637559 + | putative transcriptional activator protein qor 1638573 - 1637587 - | putative quinone reductase JTY_1491 1638593 - 1639456 + | hypothetical protein JTY_1492 1640338 - 1639406 - | putative unidentified antibiotic-transport integral membrane ABC transporter TERM 892 1640357 - 1640345 - R 81 -6.3 -4.77157 | GTAAGGCACCAAAAA CTACA CGC TGTAG TACGGGCGGACCGGT TERM 893 1640426 - 1640380 - R 83 -14.5 -3.53444 | gap 1, opp_overlap 1640389 1640395 GGACCGGTGTCGAAA CTGCAACCACGCAC-CGATGCG TCGG CGTGTCTTGTGCGTGGTTGCAG TGTCGCGAAGCCGGG JTY_1493 1641235 - 1640450 - | putative unidentified antibiotic-transport integral membrane ABC transporter JTY_1494 1642173 - 1641232 - | putative unidentified antibiotic-transport ATP-binding protein ABC transporter JTY_1495 1644104 - 1642329 - | putative transmembrane protein JTY_1496 1644152 - 1644958 + | putative transcriptional regulatory protein JTY_1497 1644955 - 1647495 + | hypothetical protein JTY_1498 1647492 - 1648685 + | hypothetical protein JTY_1499 1648682 - 1649482 + | putative ATP-binding protein ABC transporter TERM 894 1649804 - 1649777 - g 75 -2.7 -4.72272 | gap 1, opp_overlap 1649780 GGTGTTCACCAAAAA TGCCACCGAGGC GCTCA ACCT-GGTGTCA TATGTGCTGGGGGAC csd 1649484 - 1650737 + | putative cysteine desulfurase JTY_1501 1650734 - 1651222 + | putative nitrogen fixation related protein JTY_1502 1651197 - 1651544 + | hypothetical protein fadE15 1653468 - 1651639 - | putative acyl-CoA dehydrogenase PE_PGRS29 1654687 - 1653575 - | PE-PGRS family protein TERM 895 1653967 - 1653917 - G 70 -11.7 -3.36273 | gap 1 GTCGCCGAACAGGAA GGCCCTGCCGCCGGC-GCCACCTC CGCC GAGGAAGCTGCTGGCGCCAGCACC GCCGTTGCCAAAAAA TERM 896 1654096 - 1654060 - G 70 -13.6 -3.01712 | gap 1, opp_overlap 1654062, overlap 1654063 CGCCGGCCCCGAAGA GCACGGCGGAGCCGCCG ATGC CGCCGGCACCGCCGC-C ACCGCCGCTATTGCC TERM 897 1654062 - 1654104 + g 74 -14.6 -3.01712 | opp_overlap 1654060 1654063 CCGGCCCCGAAGAGC ACGGCGGAGCCGCCGATGCC GCC GGCACCGCCGCCACCGCCGC TATTGCCGCCGGCCC TERM 898 1654103 - 1654063 - G 95 -20.3 -2.73875 | opp_overlap 1654062, overlap 1654060 CGGCCCCGAAGAGCA CGGCGGAGCCGCCGATGCC GCC GGCACCGCCGCCACCGCCG CTATTGCCGCCGGCC TERM 899 1654577 - 1654529 - G 74 -12.2 -3.61398 | opp_overlap 1654567 GTGCGCGCCGAACAA CGCCGCGACCGCCGCCGACACC TCATC GGCGCCTGCGGCCGCGACAGCG GTCGTCTGGGCCGCC TERM 900 1656761 - 1656774 + G 70 -2.3 -4.57569 | CTTCATCGCCGTCCT GGTGC TGTG GGACC TTTTTGGGCAGCTGC ctpD 1654929 - 1656902 + | putative cation transporter P-type ATPase D trxA 1656946 - 1657320 + | putative thioredoxin TERM 901 1657500 - 1657474 - g 77 -7.2 -4.57073 | overlap 1657476 GAGTCGTCGGAAAAA CACCCCGACGTG GTG CACGCCAAGGTC GACACCGAAGCCGAA TERM 902 1657498 - 1657476 - g 77 -9.8 -3.90048 | overlap 1657474 GTCGTCGGAAAAACA CCCCGACGTG GTG CACGCCAAGG TCGACACCGAAGCCG trxB1 1657336 - 1657707 + | putative thioredoxin TERM 903 1657732 - 1657702 - f 73 -11.1 -3.65046 | GGGCGAGCCCAACAA GC-CTGACCGGGCGC CAG GCGCCCGG-CTGTGC CCCACCGCTGCGCGG echA12 1657729 - 1658586 + | enoyl-CoA hydratase JTY_1509 1658622 - 1660250 + | putative macrolide-transport ATP-binding protein ABC transporter TERM 904 1660497 - 1660534 + G 86 -17.7 -3.14881 | gap 1, overlap 1660505 TCAGGCACCACGATG CGCGGCCGCGG-CGGC CCCAATC GCCGTCCCCGGCCGCG TTGATCCGCCGATTG JTY_1510 1660347 - 1660538 + | putative transcriptional regulatory protein JTY_1511 1661170 - 1660607 - | putative transcriptional regulatory protein TERM 905 1661142 - 1661106 - G 72 -11.6 -3.51708 | gap 2, overlap 1661102 TATTCGGCAAAGCAA CGGCGCG-CACCGTC-GA GGA TCTGACGGCGGCGAGCCG CCAGATGGTCCTCGC acn 1664012 - 1661181 - | aconitate hydratase JTY_1513 1664170 - 1664730 + | hypothetical protein JTY_1514 1664956 - 1666374 + | hypothetical invasion protein JTY_1515 1666385 - 1667110 + | hypothetical invasion protein moxR1 1667249 - 1668382 + | putative transcriptional regulatory protein JTY_1517 1668379 - 1669332 + | hypothetical protein TERM 906 1669912 - 1669963 + G 71 -12.1 -3.28712 | overlap 1669914 GGCCATCGCCACGGT TGGCGCGGTGATCGGTGGCGGCG ACACGC CGCCGCCGGCGCGCATCGTGCTG TTCTCCGACGGCAAG TERM 907 1669914 - 1669961 + G 76 -14.7 -3.21276 | overlap 1669912 CCATCGCCACGGTTG GCGCGGTGATCGGTGGCGGCG ACACGC CGCCGCCGGCGCGCATCGTGC TGTTCTCCGACGGCA JTY_1518 1669343 - 1670350 + | hypothetical protein TERM 908 1670454 - 1670436 - T 81 -13.8 -3.54424 | GGTTACGCTCGGAAA GCGCGGGC CTC GCCCACGC GGCGGATGATGTCAG JTY_1519 1671265 - 1670423 - | hypothetical protein fabG1 1671406 - 1672149 + | putative 3-oxoacyl-[acyl-carrier protein] reductase inhA 1672168 - 1672977 + | enoyl-(acyl carrier protein) reductase hemZ 1672983 - 1674017 + | ferrochelatase JTY_1523 1674849 - 1673983 - | hypothetical protein JTY_1524 1674907 - 1675341 + | hypothetical protein JTY_1525 1675363 - 1676508 + | putative exported conserved protein JTY_1526 1676518 - 1676874 + | hypothetical protein JTY_1527 1676908 - 1677138 + | hypothetical protein JTY_1528 1677288 - 1678595 + | hypothetical protein JTY_1529 1679932 - 1679174 - | hypothetical protein TERM 909 1680335 - 1680347 + G 74 -10.5 -3.85698 | GGAGCCGCCGTTGCC GGGCC AGT GGCCC TTTGTGCGCGGCGGA mutA 1680123 - 1681970 + | putative methylmalonyl-CoA mutase small subunit mutB 1681971 - 1684223 + | methylmalonyl-COA mutase JTY_1532 1684237 - 1684539 + | hypothetical protein TERM 910 1684707 - 1684666 - g 71 -9.3 -3.78934 | TGCGCCTGACAACAA CGCGGAGAACCATACCGAC CTGG GTCGCCATGGGCCCCAGCG ATCCATTGACCGGAT TERM 911 1684836 - 1684810 - g 75 -2.9 -4.73613 | gap 1, overlap 1684811 1684814 CGACGATGAACAAAA TCAACACGG-CG CTCG CGACCGCGCTGG GGCTACCGTGGCCAT JTY_1533 1684536 - 1684853 + | hypothetical protein JTY_1534 1684850 - 1685854 + | arginine/ornithine transport system ATPase lipL 1685907 - 1687196 + | putative esterase JTY_1536 1687886 - 1687269 - | putative methyltransferase JTY_1537 1688291 - 1688100 - | hypothetical protein JTY_1538 1688373 - 1688771 + | hypothetical protein TERM 912 1689111 - 1689127 + G 73 -12.3 -3.48593 | opp_overlap 1689109 1689106 ACTTGGAAGAGGACC CGGCTCT CCT AGAGCCG TTCTATGAAAAGCTG TERM 913 1689505 - 1689515 + G 89 -3.2 -5.38549 | CTTCATTTTCTATCT TGGT GCG GCCA TTTTTATTATTTCAA JTY_1539 1688816 - 1689844 + | putative glycosyltransferase JTY_1540 1689856 - 1690677 + | hypothetical protein TERM 914 1691244 - 1691234 - g 72 -4.6 -4.56597 | CGTGCCCTGGAAAAA CACC ATA GGCG TGGCGATTAGCGAAG JTY_1541 1690890 - 1691789 + | hypothetical protein JTY_1542 1693110 - 1691962 - | TDP-4-oxo-6-deoxy-D-glucose transaminase JTY_1543 1693912 - 1693247 - | hypothetical protein TERM 915 1694741 - 1694770 + G 77 -13 -3.61268 | gap 1, opp_overlap 1694751 1694752 GCCTACCTGGCGATA CCGCAGCA-AACC CAGCA GGTTATGCTGCGG TTTCAGGATTGGGTA JTY_1544 1694105 - 1694869 + | hypothetical protein JTY_1545 1694878 - 1695837 + | hypothetical protein JTY_1546 1695967 - 1696236 + | hypothetical protein JTY_1547 1696262 - 1697302 + | putative sugar transferase fadD25 1697536 - 1699287 + | acyl-CoA synthetase mmpL12 1702846 - 1699523 - | putative transmembrane transport protein TERM 916 1701127 - 1701149 + g 70 -6.3 -4.21936 | gap 1, overlap 1701129 1701131 CCCCCAGAGCCCGCA TGCG-CCCGA CATA TTGGGACGCA TTTTCCAGTTGTCGG TERM 917 1702504 - 1702523 + g 80 -9.2 -4.22948 | GAACCGATATTTTGT CCTGCGTG TCCG CCCGCAGG TTTTCGATCAGTTTT JTY_1550 1702887 - 1703930 + | putative methyltransferase JTY_1551 1703960 - 1705204 + | putative glycosyltransferase wbbL2 1705251 - 1706036 + | putative rhamnosyl transferase JTY_1553 1707294 - 1706014 - | putative glycosyltransferase pks5 1713643 - 1707317 - | putative polyketide synthase TERM 918 1707566 - 1707601 + g 73 -9.6 -4.00868 | CAGCCGGTCTGGCCA TTCCTCGCGGGGCAGG TCCA CCAGCTCGGCAAGGAA TTTGCTTGTGCCTGA TERM 919 1708381 - 1708366 - G 70 -6.1 -4.27316 | CGTCTGAACGGAAAA CCCGA GCCTGT TCGGG GGGAAGCACCACGCT TERM 920 1709978 - 1710005 + g 72 -8.5 -4.08216 | gap 2, overlap 1709998 ACACGTGCTGATCAG CAGCCAGGCGCCG GGTT CGGCG--TGGCTG TTTTCGGGCAGCTCA TERM 921 1712001 - 1712049 + g 77 -12.9 -3.55444 | opp_overlap 1712000 1712002, overlap 1712002 CCTTGCCCGGAGAAC ACCCAGACCGGTCCGCGGTCGTC TTG GCCGACCGCGGGTGGGTAGGGGG TTTCGCCGGTGGCGA TERM 922 1712002 - 1712048 + g 77 -16.4 -2.73124 | opp_overlap 1712000 1712002, overlap 1712001 CTTGCCCGGAGAACA CCCAGACCGGTCCGCGGTCGTC TTG GCCGACCGCGGGTGGGTAGGGG GTTTCGCCGGTGGCG TERM 923 1712387 - 1712403 + g 80 -9.3 -4.24342 | opp_overlap 1712381 1712386 GCCATACGACGACAC CGCCGCG CGC CGGGGCG TTTCTTGATCGGCGC papA4 1714684 - 1714187 - | putative polyketide synthase associated protein fadD24 1714736 - 1716490 + | acyl-CoA synthetase adh 1716607 - 1717710 + | putative alcohol dehydrogenase JTY_1558 1717707 - 1718273 + | hypothetical protein JTY_1559 1718784 - 1718350 - | hypothetical protein TERM 924 1718726 - 1718688 - G 79 -16.7 -3.02511 | CGTAGCGTTCGAACA CGATGCCGAGCCCGCCG ATGAA CGGCGTCCTCGGCATCA GCTCACGCACCGCCT JTY_1560 1718844 - 1719971 + | hypothetical protein JTY_1561 1719968 - 1720645 + | putative transcriptional regulator JTY_1562 1721210 - 1721446 + | hypothetical protein ileS 1721753 - 1724878 + | isoleucyl-tRNA synthetase dinX 1725090 - 1726481 + | DNA polymerase IV ansA 1727426 - 1726446 - | putative L-aparaginase TERM 925 1727571 - 1727529 - g 76 -14.7 -3.18383 | opp_overlap 1727555 1727567, overlap 1727552 ACCTCGACCGAGGAA GCCGGGGGGGCGGGGGAAC CTAAC GCTCCCGCGCCGCCGCGAC GGCTGCGCATGCTGC lspA 1727478 - 1728086 + | lipoprotein signal peptidase JTY_1567 1728079 - 1729005 + | hypothetical protein member of YabO/YceC/YfiL family lprI 1729605 - 1729012 - | putative lipoprotein glbN 1730070 - 1729660 - | putative hemoglobin JTY_1570 1730298 - 1731323 + | putative fatty acyl-CoA reductase JTY_1571 1731328 - 1732131 + | ketoacyl reductase JTY_1572 1732153 - 1732380 + | hypothetical protein JTY_1573 1732429 - 1732860 + | hypothetical protein TERM 926 1735879 - 1735862 - g 75 -6.9 -4.41609 | GAGGACAAACACAAA CTCGCCC TAGA GCGCGAG ATGCTGGGACTGTAC TERM 927 1736066 - 1736047 - g 79 -2.8 -5.07486 | gap 1, overlap 1736049 GAGGGTCAACAAAAA CGGAATGCC ATG GGC-TTCAG CGCAATTGGAGGATC dnaE 1732928 - 1736482 + | DNA polymerase III subunit alpha PPE21 1738567 - 1736531 - | PPE family protein fadD11 1738724 - 1740667 + | putative fatty-acid-CoA ligase plsB1 1740681 - 1742546 + | glycerol-3-phosphate acyltransferase TERM 928 1742724 - 1742710 - f 100 -9.2 -4.8622 | opp_overlap 1742709 TTCCCGAAGCAAAAA GCGCCC TGC GGGCAC ATGGTTGACGGCGAT frdA 1742916 - 1744667 + | fumarate reductase flavoprotein subunit frdB 1744670 - 1745422 + | putative fumarate reductase TERM 929 1745558 - 1745583 + G 70 -2.3 -4.66833 | overlap 1745559 TATTGCGCGCCGTTG GCGCGGGCGGG AATT CCTACCAGCGG TTTTTGGACTTCAGC frdC 1745485 - 1745799 + | putative fumarate reductase frdD 1745796 - 1746173 + | fumarate reductase subunit D JTY_1582 1746241 - 1746849 + | putative regulatory protein mmpS6 1746988 - 1747434 + | hypothetical protein TERM 930 1748641 - 1748626 - g 76 -6.1 -4.52589 | opp_overlap 1748625 TGCCGGGATACAAAA CGAGC TACGAC GCTCG CTATTACATGCCCGC mmpL6 1747431 - 1750334 + | putative transmembrane transport protein JTY_1585 1750344 - 1750790 + | hypothetical protein TERM 931 1751891 - 1751907 + G 79 -11.5 -3.86015 | ACTTCCCGCAGGAGC CCGGTGC GCT GCGCCGG TTTCTCGACGACGTG ilvA 1750825 - 1752114 + | threonine dehydratase JTY_1587 1752152 - 1752370 + | hypothetical protein JTY_1588 1752376 - 1752780 + | hypothetical protein treZb 1753357 - 1752797 - | maltooligosyltrehalose trehalohydrolase treZa 1754538 - 1753354 - | maltooligosyltrehalose trehalohydrolase treY 1756828 - 1754531 - | maltooligosyltrehalose synthase TERM 932 1756244 - 1756233 - G 75 -7.2 -4.33417 | overlap 1756234 1756235 GTGATCGAGAAGAAA CGGC GGTA GCCG CACAGCCCGTGCCGC TERM 933 1756472 - 1756457 - G 70 -10.4 -3.63515 | GTCGATGTCGAAGAA CTCGGC ATAC GCCGAG GACCGGCCGAACTTC treX 1758997 - 1756832 - | maltooligosyltrehalose synthase JTY_1593 1761225 - 1759036 - | hypothetical membrane protein TERM 934 1761300 - 1761243 - R 100 -33.7 -2.56095 | gap 1, opp_overlap 1761249, overlap 1761249 TTGACAGTTAATTTA CCCAAACCAGCCTCCTGCTTCGCGC-GC TGA GCAGCGGGAAGCAGGAGGCGGGTTTGGG AGGCGAGAAAGCAAG TERM 935 1761249 - 1761294 + r 100 -24.1 -3.53012 | gap 1, opp_overlap 1761243 1761249 GTTAATTTACCCAAA CCAGCCTCCTGCTTCGCGC-GC TGA GCAGCGGGAAGCAGGAGGCGGG TTTGGGAGGCGAGAA TERM 936 1761294 - 1761249 - R 100 -24.1 -3.68619 | gap 1, opp_overlap 1761249, overlap 1761243 GTTAATTTACCCAAA CCAGCCTCCTGCTTCGCGC-GC TGA GCAGCGGGAAGCAGGAGGCGGG TTTGGGAGGCGAGAA JTY_1594 1762016 - 1761324 - | putative inv protein TERM 937 1761395 - 1761443 + g 100 -21.7 -3.14132 | overlap 1761379 1761394 1761410 GCGCTTGCTGGACCG GCGCCTGTTGGACCGGCGCCTGT TGG ACGGGCGCCTGTTGGACGGGCGC TTGCTGGACGGGCGC TERM 938 1761410 - 1761458 + g 78 -15.9 -3.14132 | overlap 1761394 1761395 GCGCCTGTTGGACCG GCGCCTGTTGGACGGGCGCCTGT TGG ACGGGCGCTTGCTGGACGGGCGC TTGCTGGACCGGCGC JTY_1595 1762540 - 1762256 - | hypothetical membrane protein bioA 1762788 - 1764101 + | adenosylmethionine-8-amino-7-oxononanoate transaminase bioF1 1764098 - 1765258 + | 8-amino-7-oxononanoate synthase bioD 1765255 - 1765935 + | dethiobiotin synthetase JTY_1599 1765935 - 1766444 + | hypothetical protein JTY_1600 1767546 - 1766590 - | partial REP13E12 repeat protein TERM 939 1766724 - 1766736 + gT 71 -3.3 -4.57569 | overlap 1766722 CGTGGGTGTTTTTGC GGGTG GTC CAGCC TTTTTCGGCGAGTCG TERM 940 1767050 - 1767080 + gT 77 -12.5 -3.57792 | ATGGGTAGCAGGGTG CCGCCGCCGGTGA AGCCC TTGCCGGCGCCGG TTTGCAGGTCGGTCA JTY_1601 1767985 - 1767317 - | partial REP13E12 repeat protein TERM 941 1767603 - 1767577 - GH 74 -5 -4.57073 | overlap 1767578 CAGGTGGGCGAAAAA GGGCGCGAATCA CTT TGATGTGCGCCT CGCCGATCAGGCCCT bioB 1768433 - 1769482 + | biotin synthase JTY_1603 1769483 - 1769722 + | hypothetical protein TERM 942 1770182 - 1770198 + G 70 -3.5 -4.56597 | overlap 1770184 CCCTGACGTACGTCA CCCAGGC CCC GCCGGTG TTTTTCGCCCGCCGG JTY_1604 1769719 - 1770384 + | putative transmembrane protein JTY_1605 1771889 - 1770549 - | hypothetical protein JTY_1606 1772856 - 1772146 - | hypothetical protein TERM 943 1772847 - 1772857 + g 72 -5.4 -4.32482 | overlap 1772856 CGTGGGCGGTGCTAC CATG GGC CATG TTTTCGATTATAAGT TERM 944 1773238 - 1773215 - g 73 -6 -4.37886 | gap 1, opp_overlap 1773225 1773232, overlap 1773216 TCAGCCCGCACAAAA CCGTGCTGATC CCG GATCAGCG-GG CCGGCTGTTCGCTGG nadA 1772905 - 1773954 + | quinolinate synthetase TERM 945 1775159 - 1775132 - g 100 -19.8 -3.53012 | CGGCCGCGCCGGAAA GGCCGCCGCCGC CCAC GCCGCGGCGGCC GGGCGTTCGCGTGCG nadB 1773954 - 1775537 + | L-aspartate oxidase TERM 946 1775999 - 1775987 - g 79 -7.7 -4.56597 | overlap 1775989 1775990 CGCGCGCTGCAAAAA TACGC GGT GCGTA CCGGTGGCGGCGTCA nadC 1775537 - 1776394 + | nicotinate-nucleotide pyrophosphatase JTY_1610 1776443 - 1777201 + | hypothetical protein JTY_1611 1777632 - 1777222 - | hypothetical protein TERM 947 1777375 - 1777338 - G 85 -15.6 -3.66018 | overlap 1777315 1777339 TGATGACGTGAACAA CGCCGCGGGCGAAG TGCACGTCGG CTTCGCCCGCGGCC AACACGTTCTTGACC TERM 948 1777374 - 1777339 - G 87 -19.1 -2.79289 | overlap 1777315 1777338 GATGACGTGAACAAC GCCGCGGGCGAAG TGCACGTCGG CTTCGCCCGCGGC CAACACGTTCTTGAC hisD 1777732 - 1779048 + | histidinol dehydrogenase hisC1 1779045 - 1780187 + | histidinol-phosphate aminotransferase hisB 1780184 - 1780816 + | imidazoleglycerol-phosphate dehydratase hisH 1780813 - 1781433 + | imidazole glycerol phosphate synthase hisA 1781443 - 1782180 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase TERM 949 1782748 - 1782721 - g 72 -8.3 -4.07568 | GGCGGTGCTGGAAAA GCTCAGCCGAG TGTCAT CGCGGCTGCGC ATGCACGGATCCACC impA 1782188 - 1783000 + | putative inositol-monophosphatase hisF 1783002 - 1783805 + | imidazole glycerol phosphate synthase hisI 1783802 - 1784149 + | phosphoribosyl-AMP 1,6 cyclohydrolase chaA 1784330 - 1785412 + | putative ionic transporter integral membrane protein bcpB 1785911 - 1785447 - | putative peroxidoxin trpE 1786052 - 1787602 + | putative anthranilate synthase component I JTY_1623 1787592 - 1788299 + | hypothetical protein trpC 1788389 - 1789207 + | indole-3-glycerol phosphate synthase TERM 950 1790025 - 1790035 + G 75 -3.2 -4.78764 | overlap 1790021 TGGTGGCGGGTCCAA TGCC ATT GGTA TTTTTCATGCGTTTC trpB 1789276 - 1790508 + | tryptophan synthase, subunit beta trpA 1790508 - 1791320 + | tryptophan synthase, subunit alpha lgt 1791320 - 1792726 + | prolipoprotein diacylglyceryl transferase TERM 951 1793164 - 1793150 - f 74 -4.9 -4.64334 | AACTCGGGAACAAAA CCGCC GGTCA GGCAG CTGTCGCTGAGAGCC JTY_1628 1793402 - 1793842 + | hypothetical membrane protein JTY_1629 1793832 - 1794230 + | hypothetical protein pykA 1794338 - 1795756 + | pyruvate kinase TERM 952 1795878 - 1795868 - g 79 -4.6 -4.7373 | CCACCCCAGCAAAAA CCCG CTC CGGA CATTTGGTGGCCAGC tesB1 1795764 - 1796666 + | acyl-CoA thioesterase II TERM 953 1797019 - 1797062 + GT 88 -8.9 -4.72272 | gap 3, overlap 1797021 CTCGCGGCATCTTCC TGGGCC-GCC-CGGTCACG-GC CAT GCATGCGACCGCGGCCGGCCTA TTTTTGCTCGCCGGA TERM 954 1797021 - 1797060 + GT 76 -9.3 -3.98256 | gap 3, overlap 1797019 CGCGGCATCTTCCTG GGCC-GCC-CGGTCACG-GC CAT GCATGCGACCGCGGCCGGCC TATTTTTGCTCGCCG cydC 1799842 - 1798112 - | putative ABC transporter JTY_1632 1796724 - 1798178 + | hypothetical protein TERM 955 1799345 - 1799317 - GT 74 -6 -4.4078 | gap 2, overlap 1799319 CGCCGGCAACCAAAA GGCAGACCGCCAGT ACC AC-GGCGG-CTGGC ACCGAAACGGCCGCG TERM 956 1799373 - 1799353 - GT 70 -10.3 -3.64703 | overlap 1799354 CGGCTGGCACCGAAA CGGCCGCGA CGA CCGCGGTCG CGGCTACTGCCAGCA cydD 1801422 - 1799839 - | putative ABC transporter TERM 957 1800478 - 1800515 + g 78 -15.5 -3.15663 | gap 1, opp_overlap 1800480, overlap 1800473 TCTCTCCAGGCGAAT CACCCCGCCG-CGCGCGG TGA CCGTTCGTCGGCCGGGTG TTGGTGAGGGTGACT TERM 958 1801452 - 1801438 - R 70 -12.8 -2.94099 | CGTGCTGAGTAGATA GCGGCG CAG CGCCGC CGATGCCTGCCACAG TERM 959 1801483 - 1801501 + r 70 -11.6 -3.21099 | overlap 1801484 CCGCGGATCCAGGGG CGCCCGGG TTC CCCGGGCC TTGGTGCTCAGGGCG TERM 960 1801484 - 1801500 + r 76 -15.1 -2.52516 | overlap 1801483 CGCGGATCCAGGGGC GCCCGGG TTC CCCGGGC CTTGGTGCTCAGGGC cydB 1802549 - 1801509 - | putative integral membrane cytochrome d ubiquinol oxidase subunit II cydA 1804036 - 1802579 - | putative integral membrane cytochrome d ubiquinol oxidase subunit I TERM 961 1803635 - 1803617 - G 70 -10.2 -3.75024 | CGCGATGATGAAGAA CGCGGACA CGT TGACCGCG ATTGCGACGATCCAG JTY_1637 1804734 - 1804147 - | hypothetical protein cya 1806019 - 1804763 - | membrane-anchored adenylyl cyclase TERM 962 1806820 - 1806806 - g 77 -7.8 -4.3534 | GTGGAACGAGCAAAA GGCCTG CTG CAGACC AAACATGGGATGACC JTY_1639 1806329 - 1806946 + | putative two-component system transcriptional regulator TERM 963 1806958 - 1806999 + T 100 -29.1 -2.78384 | opp_overlap 1806958 1806965, overlap 1806947 1806965 CTGAGGGCGAGCAGA CGCAAAATCGCCCATTTCG TACC CGAAATGGGCGATTTTGCG TCTGCTCGCGGAACC TERM 964 1806999 - 1806958 - T 100 -29.1 -2.79183 | opp_overlap 1806947 1806958 1806965, overlap 1806965 CTGAGGGCGAGCAGA CGCAAAATCGCCCATTTCG TACC CGAAATGGGCGATTTTGCG TCTGCTCGCGGAACC TERM 965 1806992 - 1806965 - T 100 -18.6 -4.24948 | opp_overlap 1806947 1806958 1806965, overlap 1806958 CGAGCAGACGCAAAA TCGCCCATTTCG TACC CGAAATGGGCGA TTTTGCGTCTGCTCG TERM 966 1806965 - 1806992 + T 100 -18.6 -4.24948 | opp_overlap 1806965 1806958, overlap 1806947 1806958 CGAGCAGACGCAAAA TCGCCCATTTCG TACC CGAAATGGGCGA TTTTGCGTCTGCTCG JTY_1640 1808222 - 1807014 - | lipid-transfer protein JTY_1641 1808710 - 1808219 - | hypothetical protein polA 1808814 - 1811528 + | DNA polymerase I TERM 967 1811820 - 1811776 - g 73 -3.6 -4.67943 | gap 1, overlap 1811783 1811786 1811795 CCGCAATAGACAAAA CGATCAAGTACTTCAACGATG GCGA CATCGTCGAAGG-CACCATCG TCAAAGTGGACCGGG rpsA 1811691 - 1813136 + | 30S ribosomal protein S1 TERM 968 1813912 - 1813925 + G 77 -8.1 -4.36914 | GGGTCAACCGCCGTG TCGGG CTTC CCCGA TTTTCTAGCCAAGGA TERM 969 1814080 - 1814055 - g 72 -6.8 -4.24948 | opp_overlap 1814066 CCAGGACACCGAAAA GACCGACGCT CGCAGC ACCGTCGGCC GCTACGACCACACCG TERM 970 1814176 - 1814157 - g 72 -13.6 -3.14132 | opp_overlap 1814166 1814168 1814175 CGGTCGGCCGACCAA CGTGCACC TGCG GGTGCACG GCTGGCCCAACCAAC coaE 1813162 - 1814385 + | dephospho-CoA kinase JTY_1645 1814979 - 1814536 - | hypothetical protein TERM 971 1816045 - 1816025 - g 73 -11.1 -3.73647 | GCCATCGAGGAAGAA CTCGCCGAG CGA CTCGCCGAG CTTGAGAGCCAGGGC TERM 972 1816910 - 1816896 - g 73 -6.4 -4.38712 | TGTACGCCGACAAAA TCACCG ACT CGATGA GGGAAGCCATCGACG TERM 973 1817044 - 1817002 - g 70 -3.5 -4.56597 | gap 2, overlap 1817004 GCCGCTGCGCAAAAA GATCGCCGACATCCTCGAT CAGGTCT ATCG-GGAGGCCGACGA-C ACCGCCGTCGTCGAG uvrB 1815224 - 1817320 + | excinuclease ABC subunit B JTY_1647 1817317 - 1818732 + | putative drug efflux membrane protein JTY_1648 1820391 - 1818721 - | hypothetical membrane protein TERM 974 1819961 - 1819944 - G 77 -6.9 -4.56775 | ACTGTTTGGCAAAAA CCACCAC GCCG GCGGCGG CCGCTCCAATGGCCA TERM 975 1820888 - 1820851 - g 76 -6.4 -4.56597 | gap 3, opp_overlap 1820869 CGCCGGTGCGAAAAA CGTCGA--GGAACGGCCGA TCG TCGGC-GCCCCGGTCGACG CGTTGGTGAACCTGG TB15.3 1820600 - 1821040 + | hypothetical protein JTY_1650 1821841 - 1821047 - | hypothetical protein uvrA 1821890 - 1824808 + | excinuclease ABC, subunit A JTY_1652 1825122 - 1824865 - | hypothetical protein JTY_1653 1826607 - 1825138 - | hypothetical membrane protein lysS 1830184 - 1826666 - | lysyl-tRNA synthetase TERM 976 1830041 - 1830025 - G 81 -10.8 -4.13282 | overlap 1830016 AGGATATTCCCAAAA GCCGGG AAATG CCCGGC GTTGCAGCCCTTTGT TERM 977 1830242 - 1830260 + H 74 -13.2 -3.35798 | TCAGCGGTCCGGTCA CAGGCATC TCG GATGCCTG TTCTGCGTGCAGCGT TERM 978 1830308 - 1830325 + H 100 -12.7 -5.19212 | ATCGGTCGGCATTGG GCCCTGC TTGT GCAGGGC TTTTTTGCTGATGGT TERM 979 1830990 - 1830938 - g 74 -14.6 -3.01791 | overlap 1830905 1830902 ACCGCGGTGCGAAGA CCCGCGCTAGGGCCCGCCACCCGG GTGAA CCGGCCGGCGGGCCGCCGCCCAAG CCCACGGCCGGTGAC infC 1830421 - 1831026 + | putative initiation factor IF-3 rpmI 1831076 - 1831270 + | 50S ribosomal protein L35 rplT 1831332 - 1831721 + | 50S ribosomal protein L20 tsnR 1831754 - 1832536 + | putative 23S rRNA methyltransferase JTY_1659 1833602 - 1832547 - | hypothetical protein TERM 980 1833165 - 1833188 + g 70 -2.3 -4.60041 | overlap 1833170 CATCCGGTACCAGCG CACGTGCTC CTCGAA GAGCTGGTG TTTTTCGGCCTCGGT PE17 1833912 - 1834844 + | PE family protein JTY_1661 1834922 - 1835872 + | hypothetical protein TERM 981 1836063 - 1836089 + G 78 -5.9 -4.62622 | gap 2, opp_overlap 1836063, overlap 1836050 1836049 1836063 1836062 GAACGCTGTGGAACA GC--GCCTTCGTC ATC GACGAGGGCCCGC TTTATTTCTGGTTAC JTY_1662 1835879 - 1836685 + | putative transmembrane protein pheS 1836881 - 1837906 + | phenylalanyl-tRNA synthetase, subunit alpha TERM 982 1838804 - 1838837 + G 95 -19.7 -2.83715 | AGACCGCCGTGACCC TCGACGGTATCGAGC GCAA GCTCGATACCGCCGA TGTCCTGATCGTCGA pheT 1837906 - 1840401 + | phenylalanyl-tRNA synthetase, subunit beta PE_PGRS30 1843551 - 1840495 - | PE-PGRS family protein TERM 983 1840966 - 1840984 + g 77 -7.4 -4.4009 | overlap 1840968 TGTGTCCGTGACCGT CATCACCA CAT TGGTGAAG TTTTGTGACATGGCG TERM 984 1841497 - 1841446 - G 78 -13.7 -3.61517 | gap 1, overlap 1841448 ACTTTGGCCGAACAA CACCCC-GCCGGTGCCACCGGT GCCGCCATT ACCCGGGGCACCGGCCGGGCTG CCGGCGCCGCCGGCG TERM 985 1841494 - 1841448 - G 85 -16.5 -3.38812 | overlap 1841446 TTTGGCCGAACAACA CCCCGCCGGTGCCACCGGT GCCGCCATT ACCCGGGGCACCGGCCGGG CTGCCGGCGCCGCCG TERM 986 1842033 - 1842004 - G 80 -14.9 -3.44146 | overlap 1842005 GCTGCCGAGAAGCAA CGCGGTGCCGCCG CTGC CGCCGGCACCGCC GACACCGGAGCTAAA TERM 987 1842032 - 1842005 - G 87 -18.4 -2.66274 | overlap 1842004 CTGCCGAGAAGCAAC GCGGTGCCGCCG CTGC CGCCGGCACCGC CGACACCGGAGCTAA TERM 988 1842144 - 1842106 - G 73 -14.4 -3.14931 | opp_overlap 1842111 1842115, overlap 1842110 GCCATTGCCGATGAA GCTACTGCCCGCGGCACC ACC GGCGCCGCCGGCACCGGC GTTGGCGAGTATGTT TERM 989 1842140 - 1842110 - G 71 -14.6 -2.56596 | opp_overlap 1842111 1842115, overlap 1842106 TTGCCGATGAAGCTA CTGCCCGCGGCACC ACC GGCGCCGCCGGCAC CGGCGTTGGCGAGTA TERM 990 1842348 - 1842331 - G 77 -12.7 -3.67775 | ACCGTTACCGAACAA GCTGGCG TTGC CGCCAGC ACCCCCGGCACCGCC TERM 991 1842463 - 1842444 - G 77 -16.4 -2.62184 | opp_overlap 1842456 CGTTGCCGTACAGCA GGCCGGCG TTGC CGCCGGCC CCGCCAGCGCCGGCG TERM 992 1842935 - 1842894 - G 70 -12.9 -3.01712 | gap 1, overlap 1842897 CGCCGTTGCCGAACA GCAG-GGCGTTGCCGCCGGC CCC ACCGGCCGCAGCGGCACTGC CCCCGTTGCCGCCGG TERM 993 1844199 - 1844243 + G 75 -4.9 -4.57569 | gap 2, opp_overlap 1844183, overlap 1844185 1844198 TGCGCGGCACCCGCC GCATC-GCGGTGCC-CGGCTG CTATC CGACCGCGGCACTGCTGGCGC TTTTTCCCGCGCTGG argC 1843745 - 1844803 + | N-acetyl-gamma-glutamyl-phosphate reductase argJ 1844800 - 1846014 + | ornithine acetyltransferase argB 1846011 - 1846895 + | acetylglutamate kinase TERM 994 1847399 - 1847361 - g 70 -8.6 -3.90856 | overlap 1847348 1847349 AACCGGCCAAGCAAA CGCCGTTCGCGCCGCTGC CCG GCGACGTCACGCACGTCG GCTACGGCGACGTCG argD 1846892 - 1848094 + | acetylornithine aminotransferase argF 1848091 - 1849014 + | ornithine carbamoyltransferase argR 1849011 - 1849523 + | arginine repressor TERM 995 1850025 - 1849993 - g 71 -12.8 -3.30124 | gap 1, overlap 1849994 GTGGACGCGGGAGAA GGCGATCGCGTTCGC CGAG GAGAACGCGATC-CC GATCAACGTCACCAA argG 1849532 - 1850728 + | argininosuccinate synthase TERM 996 1850789 - 1850748 - f 87 -19 -2.78384 | opp_overlap 1850748 1850755, overlap 1850755 TCTCCCGCGAGCAGA CGCAGAATCGCACCGCC-AC GCCC GTCGGCG-TGCGATTCTGCG TCTGCTCGCCACAGA TERM 997 1850748 - 1850789 + F 87 -19 -2.78384 | opp_overlap 1850748 1850755, overlap 1850755 TCTCCCGCGAGCAGA CGCAGAATCGCACCGCC-AC GCCC GTCGGCG-TGCGATTCTGCG TCTGCTCGCCACAGA TERM 998 1851505 - 1851543 + G 70 -13.1 -3.04792 | gap 2, opp_overlap 1851494, overlap 1851524 ACAACTCCGTCGACG CGACCGCCGCC-C-GCGAC TTC GCCGCCGAGGCGGCGTTCG TGTTCGCCATGATCG TERM 999 1851524 - 1851539 + G 70 -11.8 -3.36749 | overlap 1851505 CGCCGCCCGCGACTT CGCCGC CGAG GCGGCG TTCGTGTTCGCCATG TERM 1000 1851848 - 1851872 + G 72 -13.5 -3.12351 | GCTGCTGCCGGCGAT GGCCGGGCTGG TGG CCAGCCTGACC TTCAATGTCCAGCGG argH 1850808 - 1852220 + | argininosuccinate lyase TERM 1001 1852582 - 1852554 - g 71 -3.1 -4.66163 | gap 1 ATTTTCATCGAAAAA GCCGTGGACTTG GGCGTG CAAGCCCT-GGC GGGGGCACTCGACGA pks10 1852329 - 1853390 + | putative chalcone synthase TERM 1002 1856393 - 1856406 + G 70 -5.9 -4.2528 | overlap 1856394 GCCCGGTGGTGCTGT TCCCG GGCA CGGGG TTTGTTGAGTTGGCC TERM 1003 1858233 - 1858257 + G 90 -15.7 -3.87994 | CACCGATGCCTCGCT GCGGCTACTGC CCA GCGGTGGCCGC TTTATCGAGCTGGGT pks7 1853473 - 1859853 + | putative polyketide synthase pks8 1859873 - 1864678 + | putative polyketide synthase pks17 1864678 - 1866186 + | putative polyketide synthase TERM 1004 1866312 - 1866332 + G 73 -3.9 -4.61231 | opp_overlap 1866311, overlap 1866311 GGATCCATTGACAAC GTCGCCG ATTTCGA CGCCGAC TTTTTCAACCTATCC TERM 1005 1867279 - 1867331 + G 72 -11.8 -3.61178 | TTCGGGTCGACACCG CGTTGACGCCGTGGCCGGTGGCGG ATGAG CCGCGACGGGCTGGGGTGTCGTCG TTTGGCATGGGTGGG pks9 1866192 - 1869245 + | putative polyketide synthase pks11 1869392 - 1870453 + | putative chalcone synthase cyp139 1871728 - 1870436 - | putative cytochrome P450 139 TERM 1006 1871147 - 1871185 + g 74 -12.4 -3.55563 | TCTGGGTGCCGTGCG CGCGTCGGCGATCTGAGC GTC GATGAGGTCGTCGATGCG TTTGCGGGCTGCCAT JTY_1681 1873518 - 1871743 - | macrolide-transport ATP-binding protein ABC transporter TERM 1007 1871908 - 1871934 + g 71 -2.9 -4.65895 | GTCGGCCAGGCGGGC GAGTTGACGGT CGACT GCGGCCAACTC TTTTTCGGTGGCACG JTY_1682 1873901 - 1874263 + | hypothetical protein JTY_1683 1874296 - 1874643 + | hypothetical protein JTY_1684 1874651 - 1875043 + | hypothetical membrane protein JTY_1685 1876383 - 1875052 - | putative integral membrane transport protein TERM 1008 1876041 - 1876015 - G 83 -15.8 -3.61715 | overlap 1875994 1876016 GACGCCGGGGAAGAA GCCGCCCTCGGC GAC GCCGAGGGCGAA GCGCGCCAGATACAA TERM 1009 1876040 - 1876016 - G 93 -19.3 -2.76815 | overlap 1875994 1876015 ACGCCGGGGAAGAAG CCGCCCTCGGC GAC GCCGAGGGCGA AGCGCGCCAGATACA TERM 1010 1876101 - 1876057 - G 70 -10.7 -3.58726 | gap 1, overlap 1876098 1876100 GCGCGCCAGATACAA GGTGTGCGCGCTGGTGACCA AGGCCG TGGCCGCC-GAGCACACACC CCAAGCCAGGACGAC JTY_1686 1877408 - 1876476 - | hypothetical protein JTY_1687 1878092 - 1877436 - | putative transcriptional regulatory protein TERM 1011 1877500 - 1877481 - G 71 -12.1 -3.31461 | CAGCCATTCGGAGAA CCCGCCG TCGAGT CGGCGGG CAGAAAATCCGTTGG JTY_1688 1879151 - 1878417 - | putative transcriptional regulatory protein TERM 1012 1879546 - 1879558 + G 95 -5.5 -5.26875 | overlap 1879545 TGCGGACAGTGGAAT CACCG AGG TGGTG TTTTTTCATTCGGCG JTY_1689 1879223 - 1879927 + | hypothetical protein dsbF 1879924 - 1880472 + | putative lipoprotein TERM 1013 1881309 - 1881347 + G 79 -13 -3.65351 | overlap 1881319 GGCGCACCGTCGCGT TGGTCGCGGCGGTGGTCG CGG TGGCCGCCGCGGCCGCCA TTTACCTGCAAGTCG TERM 1014 1881319 - 1881346 + G 72 -14.8 -2.78996 | overlap 1881309 CGCGTTGGTCGCGGC GGTGGTCGCGGT GGCC GCCGCGGCCGCC ATTTACCTGCAAGTC JTY_1691 1880573 - 1881475 + | hypothetical integral membrane protein fadE16 1881475 - 1882596 + | putative acyl-CoA dehydrogenase JTY_1693 1882605 - 1883429 + | hypothetical protein moeX 1883426 - 1884418 + | putative molybdopterin biosynthesis protein JTY_1695 1884579 - 1885496 + | putative coiled-coil structural protein TERM 1015 1887525 - 1887488 - g 83 -2.6 -5.1287 | gap 1, opp_overlap 1887498 1887523 TCGACATGGAAAAAA TCGACCCGGACGCCGTC GAGTT GCCGGCGTG-GTATCGA CCGAATCCCGGATTG JTY_1696 1885759 - 1888713 + | acyl-CoA synthetase JTY_1697 1888706 - 1888930 + | hypothetical protein JTY_1698 1889519 - 1888896 - | hypothetical protein JTY_1699 1890201 - 1889521 - | putative integral membrane protein ABC transporter TERM 1016 1889941 - 1889905 - G 77 -12.9 -3.56727 | overlap 1889914 GCCAAGGAACCAGAA CGCCACAATGCAGGCCA GCG TGGCCTGCGCCGCCGCG GCGATCGAGAACGCG TERM 1017 1889932 - 1889914 - G 71 -14.6 -2.62653 | overlap 1889905 CCAGAACGCCACAAT GCAGGCCA GCG TGGCCTGC GCCGCCGCGGCGATC JTY_1700 1891040 - 1890273 - | putative ATP-binding protein ABC transporter TERM 1018 1891048 - 1891017 - G 73 -13.2 -3.33815 | opp_overlap 1891026, overlap 1891034 ACCGTCGCGAAGTAA TTCATCACTTGATG AAAT CATCATGTGATGAA TATCCGCCAGTCGTG JTY_1701 1891099 - 1891710 + | 3-methyladenine DNA glycosylase tyrS 1891722 - 1892996 + | tyrosyl-tRNA synthase lprJ 1893647 - 1894030 + | putative lipoprotein TERM 1019 1894319 - 1894294 - g 73 -12.5 -3.38272 | gap 1 GACGACGACCCAGAA GCCGCTCTGCGC CAC GCGCGG-GCGGC GCGGGTTCGGGCCAG JTY_1704 1894069 - 1894821 + | hypothetical protein JTY_1705 1894818 - 1895879 + | putative phosphatase JTY_1706 1895876 - 1896052 + | hypothetical protein tlyA 1896060 - 1896866 + | cytotoxin|haemolysin homologue TERM 1020 1897066 - 1897106 + G 75 -9.5 -4.07885 | overlap 1897069 GATCGAGGTGGTTGA CGCGGACCAGCACGCAGCC GAC GGCTGCGAACTGGTGCTGG TTTTGGGCGGCGATG TERM 1021 1897069 - 1897103 + G 73 -14.2 -3.08032 | overlap 1897066 CGAGGTGGTTGACGC GGACCAGCACGCAGCC GAC GGCTGCGAACTGGTGC TGGTTTTGGGCGGCG TERM 1022 1897188 - 1897198 + G 81 -8.2 -4.56597 | TGGGCGTCAATCTGG GCCG CAT CGGC TTTTTGGCCGAGGCC ppnK 1896866 - 1897789 + | inorganic polyphosphate/ATP-NAD kinase recN 1897803 - 1899566 + | putative DNA repair protein JTY_1710 1899662 - 1900843 + | hypothetical protein TERM 1023 1900933 - 1900945 + G 77 -3.3 -4.86001 | GGCCATGGGCGTAGT GTTGG GTT CCGGC TTTTTCTCCGATACT JTY_1711 1900865 - 1901809 + | hypothetical protein TERM 1024 1902474 - 1902491 + G 83 -2.5 -5.252 | overlap 1902476 CAAGTCCGGCACTAT CTCGGCC GGGA GGACGTG TTTTTTCTGCACGTG pyrG 1901949 - 1903709 + | CTP synthase JTY_1713 1903702 - 1904325 + | hypothetical protein xerD 1904322 - 1905257 + | site-specific tyrosine recombinase JTY_1715 1906695 - 1905331 - | hypothetical protein JTY_1716 1907840 - 1907250 - | putative catechol-O-methyltransferase cycA 1909575 - 1907905 - | putative D-serine/alanine/glycine transporter protein TERM 1025 1908202 - 1908178 - G 72 -6.9 -4.21922 | overlap 1908174 1908179 GCAGTGAAAACCAAA GCTGCGGCGGC TCT GCCGGCGCTGG GTGACGAGCCAACCC TERM 1026 1909295 - 1909282 - G 91 -9.5 -4.7373 | overlap 1909283 1909284 CCACCCCACGAAAAA GCCCG CCGC CGGGC CCAGGAGGTCGGCGG PPE22 1910773 - 1909616 - | PPE family protein PPE23 1911997 - 1910813 - | PPE family protein TERM 1027 1911417 - 1911400 - G 76 -8.3 -4.21275 | opp_overlap 1911410 CGAACGGAGTCAAAA CCGTGGC GGGT GCCGCGG CGCTGGCATAGCCGT TERM 1028 1912643 - 1912619 - R 70 -9.9 -3.59979 | GGGCGTTACGTGAAA GGTTCGGCAGC GGT GCTGCCCAGCC TGGCCGGTGGCGAAC JTY_1720 1912768 - 1912601 - | hypothetical protein TERM 1029 1913881 - 1913898 + G 77 -2.7 -4.89562 | gap 1, overlap 1913883 1913885 AGACCGCCCTGTCGG CGGCCACT CAC AGT-GTCG TTTTGTTCGTTTTCG JTY_1721 1913001 - 1914461 + | putative transmembrane protein JTY_1722 1914479 - 1915435 + | putative initiation inhibitor protein JTY_1723 1915432 - 1916268 + | hypothetical protein JTY_1724 1916265 - 1916960 + | hypothetical protein JTY_1725 1916957 - 1917721 + | hypothetical protein cmk 1917718 - 1918410 + | cytidylate kinase TERM 1030 1918543 - 1918573 + G 77 -15.4 -3.02511 | CCCTGGTCAACCGGA TCCTGGGCCGCCGC GAG GCGGTGGTGCAGGA TATTCCCGGCGTGAC TERM 1031 1918865 - 1918851 - g 73 -4.2 -4.70659 | opp_overlap 1918859 GTCGACAGCGAAAAA GGCG AATCCGA CGCC GCGGCGTTGTGGTCG engA 1918407 - 1919798 + | GTP-binding protein TERM 1032 1919858 - 1919893 + F 81 -12.7 -3.76373 | opp_overlap 1919866 AGGCCGGTTCTGCTG TCCCATAATGCGGCT ATGTTC AGCTGCATTACGGGA TTTAGGTGTTGACAC JTY_1728 1919972 - 1920784 + | putative oxidoreductase fadB3 1920778 - 1921692 + | putative 3-hydroxybutyryl-CoA dehydrogenase TERM 1033 1922407 - 1922372 - g 78 -10.5 -4.08216 | gap 1 CTACGGCTTTGAAAA CG-TCGGCGGTGACCT GGACA AGGTCACCGGCAAGCG CGTCACTTTCGCGGC JTY_1730 1921695 - 1922525 + | hypothetical protein JTY_1731 1922525 - 1922875 + | hypothetical protein JTY_1732 1922928 - 1923551 + | hypothetical protein JTY_1733 1923759 - 1924538 + | putative transcriptional regulatory protein JTY_1734 1925537 - 1925148 - | hypothetical protein JTY_1735 1925761 - 1925534 - | hypothetical protein TERM 1034 1925798 - 1925774 - H 70 -12.9 -2.90392 | CATGTTGTAAGCATA TCGGACATGTG AAA CACATGTCCGG TTGCCGGTGTGACCG JTY_1736 1925979 - 1927463 + | biotin carboxylase-like protein JTY_1737 1927460 - 1928707 + | putative hydrolase JTY_1738 1929169 - 1928750 - | hypothetical protein TERM 1035 1928949 - 1928926 - G 72 -5.2 -4.34402 | overlap 1928927 CGGTCGATACGAAAA CCGAGAACCG AATA CGGTCGTCGA GCAGCGAAATGTCGA JTY_1739 1929869 - 1929159 - | hypothetical protein JTY_1740 1929970 - 1931355 + | putative oxidoreductase JTY_1741 1931388 - 1931957 + | hypothetical protein JTY_1742 1932752 - 1931982 - | hypothetical protein JTY_1743 1933687 - 1932749 - | hypothetical protein JTY_1744 1935306 - 1933753 - | putative penicillin-binding protein TERM 1036 1936785 - 1936750 - g 70 -6.1 -4.18058 | gap 1 AAGCACAGCTGAAAA CCGTGTCCGGTCACGT GGATG ACGCGAC-GGCCAAGG GCGCCAAGGTGATTG gabD2 1935738 - 1937294 + | succinic semialdehyde dehydrogenase JTY_1746 1937852 - 1937304 - | hypothetical protein JTY_1747 1938548 - 1937916 - | putative transmembrane protein JTY_1748 1939077 - 1938835 - | hypothetical protein JTY_1749 1939849 - 1939352 - | hypothetical membrane protein narX 1942247 - 1940289 - | putative nitrate reductase TERM 1037 1941133 - 1941108 - G 76 -14.7 -3.14564 | gap 1 GTACCCGCTCAGCAA CCGCCG-CCCCG CCT CGGGGTCGACGG TCGCGGCGAATTCGA TERM 1038 1941950 - 1941924 - G 77 -7.9 -4.30576 | gap 1, overlap 1941926 CGTGTACCAGGAAAA CGCCGC-GCCGC GCGG GCAGCCGCGGGG CTCATACTCGGGCCG narK2 1943431 - 1942244 - | putative nitrate/nitrite transporter JTY_1752 1943718 - 1944002 + | hypothetical protein JTY_1753 1945698 - 1944016 - | putative sulphate-transport transmembrane protein ABC transporter TERM 1039 1945052 - 1945032 - G 70 -11.1 -3.60661 | CATCCAAGGACATAA CGGCCACTA GCA TCGTGGCCG CAAGAACCGCGATGA JTY_1754 1945766 - 1945978 + | hypothetical protein JTY_1755 1945978 - 1946226 + | hypothetical protein TERM 1040 1946841 - 1946858 + G 72 -6.9 -4.19177 | CATTATTGCGCCGAC CCCGTGG ATGT CGACGGG TTTGTATTCCCGACT JTY_1756 1946307 - 1946972 + | hypothetical protein TERM 1041 1947579 - 1947569 - g 72 -6.8 -4.28994 | CACCACCGACGAAAA GCTG ACC CAGC TCGGCAACACGGTGG TERM 1042 1948673 - 1948655 - g 77 -10.2 -3.93638 | opp_overlap 1948656, overlap 1948656 AACGAAGGCCACAAA CGCCAGCG AGA CGCTGGCC GGCTTCAATGCCAGC TERM 1043 1948672 - 1948656 - g 72 -13.7 -2.95459 | opp_overlap 1948656, overlap 1948655 ACGAAGGCCACAAAC GCCAGCG AGA CGCTGGC CGGCTTCAATGCCAG pknE 1947066 - 1948766 + | putative transmembrane serine/threonine-protein kinase E JTY_1758 1949452 - 1949051 - | hypothetical protein idi 1950053 - 1949523 - | isopentenyl-diphosphate delta-isomerase pknF 1950200 - 1951630 + | anchored-membrane serine/threonine-protein kinase JTY_1761 1951692 - 1954289 + | putative transmembrane ATP-binding protein ABC transporter JTY_1762 1954662 - 1955393 + | hypothetical protein JTY_1763 1955947 - 1955390 - | putative integral membrane protein fadD1 1957629 - 1956031 - | acyl-CoA synthetase TERM 1044 1956174 - 1956207 + g 83 -13.1 -3.767 | TGGCGGTGCTGGGAA GGTCGGCCGCGATGC GGAT GTATCGTGGCCGGGC TTTAGTGGATAGGTC JTY_1765 1957683 - 1959065 + | hypothetical protein JTY_1766 1959192 - 1959641 + | hypothetical protein PPE24 1962756 - 1959676 - | PPE family protein JTY_1768 1964651 - 1962960 - | hypothetical protein plcD 1966379 - 1964835 - | putative phospholipase C 4 TERM 1045 1966111 - 1966122 + g 77 -5.8 -4.63218 | AGAGCCTGCGTCATC GGGT TCCA ACCC TTTTGTTGGAAGAGC JTY_1770 1967692 - 1966508 - | hypothetical protein TERM 1046 1967599 - 1967548 - G 72 -5.2 -4.30576 | gap 4 CCGGGACGATCAAAA CACCTC-GT-GTCCG-CT-GGCGCAG TATT CCGCGCCCAGCCGGTCCACCGCGGTG CGGAGTCCGCCCGAG JTY_1771 1967842 - 1968981 + | putative sulfite oxidase mmpL14 1969182 - 1972019 + | putative transmembrane transport protein cut1 1972340 - 1972996 + | putative cutinase wag22b 1975674 - 1973263 - | PE-PGRS family protein TERM 1047 1973311 - 1973337 + g 75 -9.3 -4.11484 | TACCAGCCCACCGGC GCCGCCGGCAC CCGCC GTGCCCCCGGC TTTTCCGGCATTGCC TERM 1048 1973985 - 1973950 - G 74 -12.4 -3.61398 | overlap 1973951 CCCGTTGGCGAACAA CCCGGCAGCGCCGCCA GTCC CGCCGGCGCCGCCAGT GGTAACGCCTGCGGT TERM 1049 1973984 - 1973951 - G 75 -15.9 -2.76696 | overlap 1973950 CCGTTGGCGAACAAC CCGGCAGCGCCGCCA GTCC CGCCGGCGCCGCCAG TGGTAACGCCTGCGG TERM 1050 1974066 - 1974049 - G 73 -14.1 -3.21099 | CGCGCCGATGAGCAA GCCGGCG TTCC CGCCGGC CCCGCCGACGCCGCC TERM 1051 1974175 - 1974136 - G 93 -17.8 -3.75105 | gap 1 GGAACCGATCAAGAA GGCGGAT-CCGCCGGCGCC ACC GGCCCCGCCGGCACCCGCC GTTCCGACGCCGCCG TERM 1052 1974920 - 1974878 - G 84 -16.9 -3.11316 | overlap 1974874 CCACCACCGAAGACA GTGCCGCCAGCCCCACCGG TGCCG CCGGCGCCACCGGCGGCAC CCAGGGAAAGCGTCC wag22a 1975955 - 1975671 - | PE-PGRS family protein TERM 1053 1976455 - 1976471 + H 75 -12.3 -3.54129 | opp_overlap 1976436 1976433 GCCGGTGCCACCGGC GTCTGGG CAC CCCAGAC TTTCGCGCCGCTGTC JTY_1776 1976531 - 1978060 + | hypothetical protein JTY_1777 1978431 - 1978048 - | hypothetical protein JTY_1778 1979219 - 1978431 - | hypothetical protein JTY_1779 1979826 - 1979359 - | hypothetical protein JTY_1780 1980076 - 1979924 - | hypothetical protein JTY_1781 1981493 - 1980237 - | hypothetical protein JTY_1782 1982335 - 1982120 - | hypothetical protein JTY_1783 1982715 - 1982984 + | transposase JTY_1784 1983052 - 1983411 + | hypothetical protein TERM 1054 1984249 - 1984284 + G 83 -13.8 -3.83262 | overlap 1984250 GGCGGGGTGGGCACC ACCGGTGGCGCCGGCG GGAA CGGCGGCGGCGCCGGG TTGTTCTACGGTTTC TERM 1055 1984250 - 1984283 + G 82 -17.3 -2.89234 | overlap 1984249 GCGGGGTGGGCACCA CCGGTGGCGCCGGCG GGAA CGGCGGCGGCGCCGG GTTGTTCTACGGTTT TERM 1056 1985219 - 1985277 + G 100 -22.3 -2.88571 | gap 1, overlap 1985223 1985225 1985256 TCGGCAACGGCGGGG CG-GGCGGGGCCGGCGGCGCCGGCGGCA TCGG TGCCGGCGGAGCCGGCGGCTTCGGCGCG GTTCTGTTTGGCAAC TERM 1057 1985223 - 1985278 + G 74 -10 -3.81488 | overlap 1985219 1985225 1985256 CAACGGCGGGGCGGG CGGGGCCGGCGGCGCCGGCGGCATCG GTGC CGGCGGAGCCGGCGGCTTCGGCGCGG TTCTGTTTGGCAACG PE_PGRS31 1983592 - 1985466 + | PE-PGRS family protein JTY_1786 1985622 - 1986866 + | hypothetical protein JTY_1787 1986874 - 1988160 + | hypothetical protein TERM 1058 1989368 - 1989404 + G 81 -12.4 -3.86346 | gap 2, overlap 1989394 GCAGTGGGATCGGTT CGCCGCGGTTCGCGATCG CCT CGATC-CGGACCG-GGTG TTTCTCAACGACTAC JTY_1788 1988157 - 1989443 + | oxidoreductase JTY_1789 1989632 - 1989943 + | hypothetical protein JTY_1790 1990762 - 1990016 - | transcriptional regulatory protein TERM 1059 1990043 - 1990075 + g 71 -3.4 -4.57569 | gap 2, overlap 1990044 1990045 GTCCGGCGAGTCCGC G-GCGGCGCGCAA-CG CGG CGATTATGCGCTGCTC TTTTTCCAGAAATCG TERM 1060 1991368 - 1991388 + G 87 -6.8 -5.06451 | gap 1, overlap 1991356 1991355 GATCTGTACTGGGCC GCCCGCGGC GCCG GTC-CGGGC TTTTTTGGCGTCGTC TERM 1061 1991662 - 1991634 - g 70 -13.1 -3.02144 | opp_overlap 1991626 1991626, overlap 1991643 TGACTCGCCCGAAGA GGCCGAACAGGCC CTC GCCCTGTTCGGCA CCTGCCCGGTTGTCG JTY_1791 1990828 - 1992168 + | putative oxidoreductase JTY_1792 1992168 - 1992986 + | hypothetical protein JTY_1793 1993551 - 1992991 - | putative transcriptional regulatory protein cyp144 1993652 - 1994956 + | putative cytochrome p450 144 JTY_1795 1995526 - 1995077 - | hypothetical protein JTY_1796 1997475 - 1995682 - | hypothetical integral membrane protein TERM 1062 1996176 - 1996189 + g 75 -4.5 -4.59773 | overlap 1996141 CACCCTCCGGTTGGA CCTGT GCCG GCAGG TTTTTCGCGATACCG TERM 1063 1997018 - 1997058 + g 91 -17 -3.71848 | overlap 1997021 TGCAGGGAGGCCGAC GCT-TGCACGGCCGCCGGCG TCG CGTCGGCG-CTGTGCATAGC TTGTTCATCGAGACG TERM 1064 1997021 - 1997054 + g 80 -17.5 -2.67428 | gap 1, overlap 1997018 AGGGAGGCCGACGCT TGCACGGCCGCCGGCG TCG CGTCGGCG-CTGTGCA TAGCTTGTTCATCGA JTY_1797 1997695 - 1998258 + | hypothetical protein malQ 2000472 - 1998298 - | putative 4-alpha-glucanotransferase JTY_1799 2000736 - 2002256 + | hypothetical protein TERM 1065 2003927 - 2003941 + G 81 -11.4 -3.92373 | opp_overlap 2003923 2003926 CTCGAAGAAGACCAG GCGCTC ATG GAGCGC TTTCTGGATGCGCTG JTY_1800 2002253 - 2006428 + | hypothetical protein cyp143 2007624 - 2006443 - | putative cytochrome P450 143 JTY_1802 2007824 - 2008027 + | putative ferredoxin TERM 1066 2008579 - 2008595 + G 89 -10.1 -4.4648 | opp_overlap 2008531, overlap 2008564 GCCGCGGCGGCCGCG GCGGCTT ATG AGGCCGC TTTTGTGATGACGGT PPE25 2008297 - 2009391 + | PPE family protein PE18 2009470 - 2009769 + | PE family protein PPE26 2009783 - 2010964 + | PPE family protein TERM 1067 2011700 - 2011716 + G 89 -10.1 -4.4648 | opp_overlap 2011652, overlap 2011685 GCCGCGGCGGCCGCG GCGGCTT ATG AGGCCGC TTTTGTGATGACGGT PPE27 2011418 - 2012470 + | PPE family protein PE19 2012897 - 2013196 + | PE family protein esxM 2013340 - 2013636 + | hypothetical protein esxN 2013687 - 2013971 + | putative EsaT-6 like protein 5 JTY_1810 2014059 - 2014961 + | hypothetical protein JTY_1811 2015233 - 2016744 + | hypothetical membrane protein TERM 1068 2018099 - 2018118 + G 79 -7.8 -4.56775 | CCGGATAATTCGTTG CTGGTTCC GGCT GGCACCAG TTTTTCCGCCGCGAT JTY_1812 2016722 - 2018479 + | hypothetical pro-rich protease TERM 1069 2018515 - 2018530 + G 72 -11.8 -3.5812 | overlap 2018513 TTGGCGTTGTCGTGG CCGCGG GTGA CCGCGG TGTTTCTGGTGGATG JTY_1813 2018476 - 2019696 + | hypothetical protein JTY_1814 2019693 - 2021525 + | hypothetical protein TERM 1070 2021990 - 2022017 + F 71 -13.4 -2.63164 | gap 1, opp_overlap 2021964, overlap 2021989 CTTCGTGTGACGCAC GGCGGGCGACGGC GGC GCCGT-GCCCGGC ATTGGTTGGGTGTCA lppT 2022152 - 2022343 + | putative lipoprotein PPE28 2022446 - 2024413 + | PPE family protein TERM 1071 2025577 - 2025556 - g 74 -10.1 -3.85698 | gap 1, overlap 2025557 CCGCCGTCGCACAAA CCGCC-GCCA CCG CGGCCGGCGG CAACCTGCAATCGGC PPE29 2024994 - 2026265 + | PPE family protein TERM 1072 2026692 - 2026728 + G 86 -18 -3.01712 | gap 1, overlap 2026696 2026697 GCAGCCACGGTGCCG CCGCCGG-TCGTCGCGG CCAA CCGCGCCGAGCTGGCGG TGTTGGCGGCGACCA TERM 1073 2026696 - 2026746 + G 85 -10.2 -4.18018 | overlap 2026692 2026697 CCACGGTGCCGCCGC CGGTCGTCGCGGCCAACCGCGCCG AGC TGGCGGTGTTGGCGGCGACCAACA TTTTCGGTCAGAACA TERM 1074 2026697 - 2026745 + G 73 -13.7 -3.10597 | overlap 2026692 2026696 CACGGTGCCGCCGCC GGTCGTCGCGGCCAACCGCGCCG AGC TGGCGGTGTTGGCGGCGACCAAC ATTTTCGGTCAGAAC PPE30 2026377 - 2027768 + | PPE family protein PE_PGRS32b 2029538 - 2027916 - | PE-PGRS family protein PE_PGRS32a 2029835 - 2029572 - | PE-PGRS family protein JTY_1821 2030342 - 2030016 - | hypothetical protein JTY_1822 2031027 - 2030680 - | hypothetical protein PE20 2031065 - 2031364 + | PE family protein PPE31 2031379 - 2032590 + | PPE family protein PPE32 2032914 - 2034143 + | PPE family protein TERM 1075 2034608 - 2034570 - g 88 -16.7 -3.72576 | gap 1, opp_overlap 2034598 TGGTCGCCTACGAAA CCGCGTTC-GCGGCGGTG GTGC CACCGCCGCAGATTGCGG CCAACCGCAGCCAGC PPE33a 2034275 - 2034838 + | PPE Family protein JTY_1828 2035926 - 2036282 + | hypothetical protein JTY_1829 2036436 - 2037140 + | putative Mg2+ transport P-type ATPase C JTY_1830 2038352 - 2037150 - | putative dehydrogenase JTY_1831 2039105 - 2038674 - | hypothetical protein TERM 1076 2040108 - 2040137 + G 73 -15.1 -2.87132 | opp_overlap 2040097, overlap 2040110 AATACCCCGTCGCAC CACCGGGTCCA CCACGGAA TGGACCCGGTG TATCTGGACAAGAAC erg3 2039514 - 2040416 + | membrane-bound C-5 sterol desaturase JTY_1833 2040521 - 2041186 + | hypothetical protein JTY_1834 2041249 - 2041953 + | putative transcriptional regulatory protein JTY_1835 2042434 - 2042514 + | hypothetical protein TERM 1077 2042739 - 2042782 + G 70 -11.7 -3.35679 | gap 1 TACTGGTGCTCGAAC GTGCCGCCGCGGCGGGCG GCACCACCG CGCTTGCCGGGG-GGCAC TTCTACCTGGGGGGC JTY_1836 2042588 - 2044051 + | hypothetical protein PE_PGRS33 2045676 - 2044171 - | PE-PGRS family protein TERM 1078 2044777 - 2044731 - G 70 -13.4 -3.04461 | CACCGACGCCGAACA GCCCACCGGCCCCGCCGGCACC ACC GGGCCCGCCGGGGGCGGTGCCC AGGAATGCCACACCG TERM 1079 2045248 - 2045193 - G 100 -19.5 -3.01712 | CGCCGTTGCCGAACA GGCCAGCGGCTCCGCCGTTGCCCCC GGGCAT GCCGGCCGCGCCGGAGCCGCCGGCC CCGCCGTTGCCGATC TERM 1080 2045557 - 2045518 - G 83 -13.4 -3.78934 | overlap 2045519 GTGTCCGGAGAACAA TGCCGCCATCGCCGCCGA CACC TCATCGGCGGCGGCGGCC AACACCGTCGTGGTC TERM 1081 2045556 - 2045519 - G 82 -16.9 -2.87146 | overlap 2045518 TGTCCGGAGAACAAT GCCGCCATCGCCGCCGA CACC TCATCGGCGGCGGCGGC CAACACCGTCGTGGT JTY_1838 2047730 - 2045811 - | putative drugs-transport transmembrane ATP-binding protein ABC transporter TERM 1082 2047782 - 2047757 - H 76 -6.8 -4.40003 | opp_overlap 2047758, overlap 2047753 2047758 CCTCACAAACAGAAA TCCTTCGGGC GAAGGT ACCCGAAGGT TGTCGATAGGCTGCC TERM 1083 2049096 - 2049076 - g 74 -12.5 -3.53012 | opp_overlap 2049072 2049070 GCCCTGGCTGCCAAA CTGGCGCGG CCG CAGCGCCAG GTCGTGCTCTTGCAG ilvG 2047801 - 2049444 + | hypothetical protein secA2 2049459 - 2051885 + | preprotein translocase subunit pgsA2 2052082 - 2052711 + | putative CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase JTY_1842 2052704 - 2053627 + | hypothetical protein TERM 1084 2053987 - 2054006 + G 70 -10.6 -3.62046 | opp_overlap 2053987 GCATCTTCGGCAACA CCGCGGCC TTGC GGCGGCGG TTGTTCGGAGCGTGA JTY_1843 2053656 - 2054021 + | hypothetical membrane protein JTY_1844 2054038 - 2054916 + | hypothetical protein gcvH 2054954 - 2055358 + | glycine cleavage system protein H cfp17 2055598 - 2056086 + | hypothetical protein cfp17 JTY_1847 2056083 - 2056826 + | hypothetical protein JTY_1848 2056945 - 2057439 + | hypothetical protein TERM 1085 2057578 - 2057546 - f 71 -13.4 -2.57344 | gap 2, opp_overlap 2057559 2057560 2057563, overlap 2057545 GAGGCGCGCGATAAG GCCGAGCGCGGCGACG ATG CG-CGCCGCGA-CGGC GAGCATCCATTATTT TERM 1086 2057559 - 2057587 + F 71 -8.7 -3.90744 | opp_overlap 2057546 2057545, overlap 2057560 2057563 AGGCCGAGCGCGGCG ACGATGCGCGCCG CGA CGGCGAGCATCCA TTATTTGCCGGCCAG JTY_1849 2057787 - 2058464 + | hypothetical protein JTY_1850 2058517 - 2058774 + | hypothetical protein TERM 1087 2060942 - 2060970 + G 77 -11 -3.86897 | gap 1 GCCCAGGCGTCGGCC CGGTGGC-GGTGC GGGC GCACCTGGCACCG TTTCTGCCAGGTCAC gcvB 2058823 - 2061648 + | glycine dehydrogenase JTY_1852 2062735 - 2061875 - | haloalkane dehalogenase TERM 1088 2062165 - 2062208 + g 79 -16.8 -2.52543 | gap 1 CCGCGGCGTTGGGCT GCACCGCCCG-GTAGTGCG CCATCAC CGCGCTACTCGGCCGGTGC TCGGTTCCCGCGGGT JTY_1853 2062776 - 2063642 + | putative hydrolase JTY_1854 2065533 - 2063647 - | hypothetical protein JTY_1855 2067582 - 2065549 - | hypothetical protein TERM 1089 2065915 - 2065963 + g 79 -16.5 -3.07344 | GGCCGTCAAGGCCGC GGGGCGGGGCTGGCCGTTGACCG GGT CGGCCAATGGCCCGGCCGGCACC TCTGTTCGGCCCTCG TERM 1090 2067332 - 2067310 - G 73 -11.2 -3.75332 | overlap 2067312 ATGTCCGAAGCGAAA CAGCGGCGGC GGG GCGGCCGCTA TGGGCTCGGCACCCG TERM 1091 2067330 - 2067312 - G 70 -11.6 -3.46068 | overlap 2067310 GTCCGAAGCGAAACA GCGGCGGC GGG GCGGCCGC TATGGGCTCGGCACC TERM 1092 2067721 - 2067743 + r 71 -13.4 -2.57132 | overlap 2067720 CGGGCCGCATCGTCA CCGGCCCTGT CCG ATGGGGCCGG CTTCTCAGCGGCCCG glcB 2069927 - 2067702 - | malate synthase G TERM 1093 2068316 - 2068339 + g 76 -2.2 -4.96848 | opp_overlap 2068304, overlap 2068303 2068325 GAACCCAGGCGGTGC TGGCCCCGGC GCGC GGCTGGGCGA TTTTTGTCTCGACCA TERM 1094 2069402 - 2069374 - G 89 -17.5 -3.51232 | overlap 2069370 GCGTCGCCAAAGGAA CCCGACGACAGCG GAA CACTGTCGTCGAG GAACTTGCGGGCATA TERM 1095 2070141 - 2070192 + r 84 -17.2 -2.72344 | gap 1, opp_overlap 2070143, overlap 2070143 2070184 GTTCTGGCCGGACAG CATC-CCGCCGGGAGCGGCTCCGGC CAC GTCGGTGCCGCTCATTGCGGCGGTG TGATTCCGAATCAGG TERM 1096 2070143 - 2070190 + r 74 -14 -2.90723 | gap 1, opp_overlap 2070143, overlap 2070141 2070184 TCTGGCCGGACAGCA TC-CCGCCGGGAGCGGCTCCGGC CAC GTCGGTGCCGCTCATTGCGGCGG TGTGATTCCGAATCA JTY_1857 2070598 - 2070203 - | hypothetical protein JTY_1858 2070858 - 2070595 - | hypothetical protein PE_PGRS34a 2072463 - 2071645 - | PE-PGRS family protein TERM 1097 2072104 - 2072074 - G 75 -13.8 -3.25823 | GTTGCCGTACAGCAA CCCGCCGGGCCCGC CGG GCTGTCCCGGCGCG CCATTGGCGCCATCA JTY_1861 2073675 - 2072626 - | hypothetical membrane protein TERM 1098 2073697 - 2073715 + r 71 -5.8 -4.26903 | overlap 2073698 CCCCGCCCCGACCCG GGGTCGGC ATG GCCGCCCA TTTTGATCAACTCCA JTY_1862 2075042 - 2073675 - | hypothetical membrane protein guaB1 2076655 - 2075216 - | inosine-5-monophosphate dehydrogenase TERM 1099 2075756 - 2075794 + gr 75 -12.2 -3.54424 | GGTGGTGCACATGGC GCCGGGGCCGACACCGAC CTT GACGACGTTCGCCCCGGC TTTCAGCAGATCCCG gnd1 2078078 - 2076021 - | 6-phosphogluconate dehydrogenase JTY_1865 2079118 - 2078168 - | hypothetical protein JTY_1866 2079549 - 2079133 - | putative transcriptional regulatory protein TERM 1100 2079771 - 2079806 + H 100 -21.9 -2.55351 | overlap 2079771 CCCGGTCGACTCGAT CGGCGAGCCCCGTGC CTTGGT GCACGGGGCTCGCCC GTTGGTGTAGACACA TERM 1101 2079771 - 2079807 + H 100 -21.7 -3.25823 | gap 1, overlap 2079771 CCCGGTCGACTCGAT C-GGCGAGCCCCGTGC CTTGGT GCACGGGGCTCGCCCG TTGGTGTAGACACAA JTY_1867 2079827 - 2080249 + | hypothetical protein ureA 2080298 - 2080600 + | urease subunit gamma ureB 2080597 - 2080911 + | urease subunit beta ureC 2080911 - 2082644 + | urease subunit alpha ureF 2082644 - 2083279 + | urease accessory protein TERM 1102 2083577 - 2083529 - g 74 -16 -2.62184 | gap 1, overlap 2083511 GGTGCTGCCAGACGA CCGGATCGCGGCCGTGCAGACCG GCGG CTGCCCGCAC-ACCGCGATCCGC GACGACATCACCGCC ureG 2083290 - 2083964 + | urease accessory protein ureD 2083972 - 2084598 + | putative urease accessory protein ndh 2085992 - 2084601 - | putative NADH dehydrogenase JTY_1875 2087056 - 2086133 - | putative oxidoreductase JTY_1876 2087772 - 2087095 - | short chain dehydrogenase modA 2087934 - 2088719 + | putative molybdate-binding lipoprotein modB 2088722 - 2089516 + | putative molbdenum-transport integral membrane protein ABC transporter TERM 1103 2089541 - 2089563 + G 70 -11.3 -3.5764 | gap 1, overlap 2089551 AGCAAGCTGCAGCTG CGCGCGGTCG TCGC CGACCG-GCG TTTGGACGTCGAATT TERM 1104 2089827 - 2089810 - g 74 -5.5 -4.57073 | overlap 2089811 GAGCGTGGCCAAAAA CGTGGCC TTCG GACCACA ATGCCGTCGCGGGAT modC 2089523 - 2090632 + | putative molybdenum-transport ATP-binding protein ABC transporter apa 2090685 - 2091662 + | alanine and proline rich secreted protein TERM 1105 2091989 - 2091964 - f 91 -9 -4.55023 | gap 1, opp_overlap 2091980, overlap 2091980 CTGAACAGCAGAAAA GCGCC-CACGA AAACA CCGTGGGGCGC CACACACGTTTGATC JTY_1881 2092114 - 2092419 + | putative transmembrane protein adhA 2092494 - 2093534 + | putative alcohol dehydrogenase JTY_1883 2094311 - 2093541 - | integral membrane protein JTY_1884 2095059 - 2094304 - | hypothetical protein JTY_1885 2095916 - 2095056 - | short chain dehydrogenase JTY_1886 2096090 - 2098426 + | hypothetical protein TERM 1106 2100195 - 2100146 - g 75 -15.8 -2.78384 | gap 2, overlap 2100132 CGGTGCGCGAGGACA TCGCCGGCGTCAAGGTTGCCGTCG CCCC CGACGGC-ACCGCGAC-CCTGCGA TAGCCGGCGGGCAGC JTY_1887 2098714 - 2100198 + | acetyl-CoA acetyltransferase JTY_1888 2100297 - 2102396 + | hypothetical protein JTY_1889 2103645 - 2102410 - | putative reductase TERM 1107 2103463 - 2103475 + g 84 -9.1 -4.56597 | GGTCTGGATGGTGAA GTCGC TCA GCGAC TTTTTGCCGGCCAGA JTY_1890 2104380 - 2103712 - | hypothetical protein JTY_1891 2104834 - 2104445 - | hypothetical protein lldD2 2106101 - 2104857 - | putative L-lactate dehydrogenase TERM 1108 2105256 - 2105213 - G 71 -12.2 -3.23393 | opp_overlap 2105211 2105209, overlap 2105211 CGTGATTGGACAACA CGATGCCGTCGACGCCGCGG TCCA CCACGGCGCGGGCGTCGTCG AGTGTTTGGATCCCT TERM 1109 2105745 - 2105703 - G 91 -12.7 -4.2349 | gap 2 GGTGGATAGCGAAAA CGGGATC-CCAGC-CGCGGCC GCC GCCCGCGCGCCGGCGATCTCG CCCTCGGTGTGCATC JTY_1893 2106124 - 2106561 + | hypothetical protein JTY_1894 2106634 - 2107320 + | hypothetical protein JTY_1895 2107331 - 2107774 + | hypothetical protein bfrA 2108290 - 2108769 + | putative bacterioferritin JTY_1897 2108854 - 2110389 + | putative integral membrane protein JTY_1898 2109704 - 2110918 + | putative integral membrane protein glnA3 2110973 - 2112325 + | putative glutamine synthetase JTY_1900 2112328 - 2113464 + | hypothetical protein cyp140 2114808 - 2113492 - | putative cytochrome p450 140 lppE 2115280 - 2114858 - | putative lipoprotein JTY_1903 2116154 - 2115321 - | short chain dehydrogenase JTY_1904 2116658 - 2116182 - | hypothetical protein rpfC 2117227 - 2116697 - | putative resuscitation-promoting factor JTY_1906 2117838 - 2117239 - | chorismate mutase fbpB 2118833 - 2117856 - | secreted antigen 85-B TERM 1110 2120128 - 2120093 - g 71 -12.6 -3.33492 | overlap 2120114 2120115 GCACGGAGCGCACAA GCCGACGCCACG TATCGCAAAGGC CGTGGCGCCGGC GGTGCCGCCTCCGCC TERM 1111 2120155 - 2120114 - g 70 -10.8 -3.61178 | overlap 2120093 2120115 GCCACGTATCGCAAA GGCCGTG-GCGCCGGCGGTG CCGC CTCCGCCGACGGTCACG-CC ACCAGTCCCTGCTCG JTY_1908 2119224 - 2120366 + | hypothetical protein JTY_1909 2121055 - 2120336 - | putative transmembrane protein JTY_1910 2121593 - 2121420 - | hypothetical protein JTY_1911 2121993 - 2121637 - | hypothetical protein JTY_1912 2122663 - 2122052 - | hypothetical protein TERM 1112 2122841 - 2122873 + G 70 -3.5 -4.56597 | gap 3, overlap 2122844 ACTATGACGCTTCGC TGG-GCGC-CCCATGC TCCA GC-TGGGAGCGCTTCA TTTTTGGACGAGGCC JTY_1913 2122717 - 2123124 + | hypothetical protein JTY_1914 2123141 - 2123452 + | hypothetical protein JTY_1915 2123462 - 2123680 + | hypothetical protein JTY_1916 2124845 - 2123715 - | hypothetical protein TERM 1113 2124766 - 2124748 - G 79 -8.8 -4.371 | CCGAGCACACCAAAA CCACCAGC TTT GCTGACGG CGACCACCACATCGC JTY_1917 2125497 - 2125820 + | putative dehydrogenase JTY_1918 2125817 - 2126521 + | putative dehydrogenase JTY_1919 2127422 - 2126511 - | hypothetical protein JTY_1920 2127858 - 2127427 - | D-tyrosyl-tRNA deacylase JTY_1921 2127916 - 2128224 + | hypothetical protein lppD 2129266 - 2128190 - | putative lipoprotein TERM 1114 2129262 - 2129231 - G 72 -11.4 -3.54424 | overlap 2129216 GGTCAGCCCGGCAAA CCAGGACAACCGGG GCAA CCCGGCAGCCCGGG ACATTAGCGCGTGCG lipJ 2130654 - 2129266 - | putative lignin peroxidase cinA 2130683 - 2131975 + | competence damage-inducible protein A nanT 2133295 - 2132027 - | putative sialic acid-transport integral membrane protein TERM 1115 2133381 - 2133392 + H 74 -5.8 -4.46212 | TCCGTGGCAGGATCG GGCA ATGG TGCC TTTTCTGATGCGCGC JTY_1926 2133385 - 2133789 + | hypothetical protein JTY_1927 2133975 - 2134406 + | hypothetical protein aao 2135416 - 2134454 - | putative D-amino acid oxidase JTY_1929 2135916 - 2135446 - | hypothetical protein TERM 1116 2135547 - 2135572 + g 78 -14.7 -3.30159 | overlap 2135550 GTCCAGGAACTCCGG CAGGGGCAGCG CCTT CGCTGCCCGTG TTCTGCCAGGGTTGG TERM 1117 2135550 - 2135569 + g 71 -15 -2.52742 | overlap 2135547 CAGGAACTCCGGCAG GGGCAGCG CCTT CGCTGCCC GTGTTCTGCCAGGGT JTY_1930 2136903 - 2136256 - | hypothetical protein TERM 1118 2136823 - 2136872 + g 77 -13.4 -3.54029 | opp_overlap 2136827 2136829 2136830 2136832 ACAAATCGCGCCGGG CAAACACCAGCACCCCGCGAGC CGGTCA GCTCGCGGGGTGCTGCGGCGGG TTGTGGTTGATCGGC TERM 1119 2136868 - 2136827 - G 100 -22.3 -3.53091 | opp_overlap 2136823, overlap 2136829 2136830 2136832 ATCGCGCCGGGCAAA CACCAGCACCCCGCGAGCC GGTC AGCTCGCGGGGTGCTGCGG CGGGTTGTGGTTGAT TERM 1120 2136866 - 2136829 - G 100 -23.5 -3.34398 | opp_overlap 2136823, overlap 2136827 2136830 2136832 CGCGCCGGGCAAACA CCAGCACCCCGCGAGCC GGTC AGCTCGCGGGGTGCTGC GGCGGGTTGTGGTTG TERM 1121 2136865 - 2136830 - G 100 -27 -2.60496 | opp_overlap 2136823, overlap 2136829 2136827 2136832 GCGCCGGGCAAACAC CAGCACCCCGCGAGCC GGTC AGCTCGCGGGGTGCTG CGGCGGGTTGTGGTT TERM 1122 2136863 - 2136832 - G 100 -23.8 -2.84325 | opp_overlap 2136823, overlap 2136830 2136829 2136827 GCCGGGCAAACACCA GCACCCCGCGAGCC GGTC AGCTCGCGGGGTGC TGCGGCGGGTTGTGG katG 2139132 - 2136910 - | catalase-peroxidase-peroxynitritase T furA 2139622 - 2139170 - | ferric uptake regulation protein TERM 1123 2139512 - 2139480 - G 82 -11.4 -4.13767 | gap 1 TCGGGCAGCGCAAAA CGCACGACACCGAAA ATCG TTTCCGTGTCG-GCG TGTGGATGCGCATTC JTY_1933 2140320 - 2139727 - | hypothetical protein lppC 2141008 - 2140403 - | putative lipoprotein fadB5 2142112 - 2141108 - | putative oxidoreductase JTY_1936 2142212 - 2142964 + | hypothetical protein JTY_1937 2143349 - 2142942 - | hypothetical protein aceA 2143484 - 2145784 + | putative isocitrate lyase PPE34 2151461 - 2145954 - | PPE family protein TERM 1124 2152084 - 2152072 - R 76 -6.2 -4.56597 | TCCGGCGTTGAAAAA GCCC GACGA GGGC GTTGCGCTCGAGTTG PPE35a 2154763 - 2152886 - | PPE family protein TERM 1125 2154230 - 2154174 - G 100 -24.5 -4.07568 | gap 1 GCCCGGCCGGCAAAA GTCGG-CATGCCCACGGCCGTGGTGA GCGCGG TCACCACGGCCGCGGGCCCGGCCGCC AGACCCGCCGGAAGC JTY_1942 2155676 - 2155212 - | hypothetical protein JTY_1943 2155774 - 2156637 + | hypothetical protein lppF 2157946 - 2156675 - | putative lipoprotein JTY_1945 2158218 - 2159333 + | putative lipoprotein TERM 1126 2159652 - 2159664 + G 71 -9.1 -3.76224 | AAGGGTTGGCCGCAA CGGTG ATT CACCG TTTGGTCGATCGCGG TERM 1127 2159668 - 2159681 + G 76 -5.9 -4.46212 | GGTGATTCACCGTTT GGTCG ATCG CGGCC TTTTGTCCTACGACG lipD 2159324 - 2160664 + | putative lipase JTY_1947 2161081 - 2160701 - | hypothetical protein fadD31 2161238 - 2163100 + | acyl-CoA synthetase mpt63 2163587 - 2163108 - | immunogenic protein JTY_1950 2163824 - 2164597 + | hypothetical protein JTY_1951 2165368 - 2164601 - | short-chain dehydrogenase JTY_1952 2166057 - 2165413 - | hypothetical protein TERM 1128 2165571 - 2165515 - G 100 -20.2 -3.25223 | gap 2, overlap 2165511 2165516 GACGTACAGCAGCAA CTCGCCGGGCGGTCCGGTCAGGCGAGCC GTC GGCTCGCCTGACCGGACC-CTCACCC-G CTTACCGGTTCCAAC TERM 1129 2165572 - 2165516 - G 95 -20.7 -2.54812 | overlap 2165511 2165515 ACGTACAGCAGCAAC TCGCCGGGCGGTCCGGTCAGGCGAGCC GTC GGCTCGCCTGACCGGACCCTCACCCGC TTACCGGTTCCAACC JTY_1953 2166593 - 2166069 - | hypothetical protein JTY_1954 2167390 - 2166611 - | putative transcriptional regulatory protein TERM 1130 2167141 - 2167122 - G 72 -13.6 -3.13899 | overlap 2167120 AACTGCGCATGAAGA TCGGGTCG GCAT CGACCCGA ACGGCCGGAAATTCG tpx 2167523 - 2168020 + | thiol peroxidase fadE18 2169108 - 2168017 - | putative acyl-CoA dehydrogenase fadE17 2170339 - 2169110 - | putative acyl-CoA dehydrogenase echA13 2171310 - 2170354 - | enoyl-CoA hydratase JTY_1959 2171535 - 2172644 + | putative monooxygenase TERM 1131 2173225 - 2173246 + G 74 -5.8 -4.52589 | opp_overlap 2173221 2173240 CGGTGACCATATCGC GCTGCGCT GCAGCA AGGGCAGC TTTTATCTGCGCCCG TERM 1132 2174157 - 2174211 + G 86 -16.3 -3.58343 | opp_overlap 2174161 2174162 2174189, overlap 2174158 CCTTCGACCGCGCCA ACAATGCCATCGTCGGCGTCGCCGT GGACA ATGGCGACGCCGACGGAGGCGACGG TTTGCAGGTGGTGCC TERM 1133 2174158 - 2174210 + G 93 -19.8 -2.74792 | opp_overlap 2174161 2174162 2174189, overlap 2174157 CTTCGACCGCGCCAA CAATGCCATCGTCGGCGTCGCCGT GGACA ATGGCGACGCCGACGGAGGCGACG GTTTGCAGGTGGTGC TERM 1134 2174207 - 2174161 - g 90 -17.9 -3.62046 | opp_overlap 2174158 2174157, overlap 2174162 2174189 CGACCGCGCCAACAA TGCCATCGTCGGCGTCGCCGT GGACA ATGGCGACGCCGACGGAGGCG ACGGTTTGCAGGTGG TERM 1135 2174206 - 2174162 - g 100 -21.4 -2.77013 | opp_overlap 2174158 2174157, overlap 2174161 2174189 GACCGCGCCAACAAT GCCATCGTCGGCGTCGCCGT GGACA ATGGCGACGCCGACGGAGGC GACGGTTTGCAGGTG JTY_1960 2172647 - 2175166 + | putative oxygenase ephB 2175178 - 2176248 + | putative epoxide hydrolase JTY_1962 2176245 - 2176760 + | putative oxidoreductase ribA1 2176757 - 2177818 + | putative riboflavin biosynthesis protein JTY_1964 2177815 - 2178585 + | putative short-chain type dehydrogenase/reductase JTY_1965 2179124 - 2178795 - | hypothetical protein JTY_1966 2179498 - 2179121 - | hypothetical protein JTY_1967 2180085 - 2179495 - | hypothetical protein TERM 1136 2181394 - 2181384 - g 83 -8.2 -4.66264 | GAAAACCCGCAAAAA CGCC CAC GGCG ACACTGAATGGCTAC JTY_1968 2180140 - 2181504 + | hypothetical protein lppG 2182111 - 2181659 - | putative lipoprotein TERM 1137 2182292 - 2182318 + G 81 -16.6 -3.16191 | opp_overlap 2182288 TTTCAGACCAAGCTC CACGTCAACGCC GGC GGCGCTGACGTG TTCCTGCCGGTCTGC JTY_1970 2182175 - 2182576 + | hypothetical protein TERM 1138 2182722 - 2182703 - T 73 -8.6 -4.07568 | gap 1 TGTTGCGGCCGAAAA GGAAGC-GC TGC GCTGCTTCC AGTTCATGAACCAGG JTY_1971 2183215 - 2182865 - | hypothetical protein JTY_1972 2184128 - 2183226 - | hypothetical protein JTY_1973 2184340 - 2184149 - | hypothetical protein JTY_1974 2184637 - 2184341 - | hypothetical protein JTY_1975 2184877 - 2185092 + | hypothetical protein JTY_1976 2185089 - 2185400 + | hypothetical protein JTY_1977 2185895 - 2185374 - | hypothetical protein TERM 1139 2185426 - 2185408 - Gf 73 -6.6 -4.34402 | opp_overlap 2185411, overlap 2185409 GGTTTTAGACGAAAA GGACCCCA CCT CGGGGTCT GATGGCCAGGGGCAG JTY_1978 2185735 - 2186247 + | hypothetical protein JTY_1979 2186289 - 2186738 + | putative transcriptional regulatory protein JTY_1981 2187783 - 2187169 - | hypothetical protein JTY_1980 2186735 - 2187280 + | hypothetical protein JTY_1982 2188128 - 2187832 - | hypothetical protein JTY_1983 2188376 - 2188125 - | hypothetical protein JTY_1984 2188363 - 2188857 + | hypothetical protein JTY_1985 2189424 - 2189017 - | hypothetical protein JTY_1986 2189700 - 2189428 - | hypothetical protein, antitoxin JTY_1987 2190953 - 2189733 - | putative transcriptional regulatory protein TERM 1140 2189908 - 2189858 - G 76 -14.7 -3.20723 | gap 1, overlap 2189853 CTTCGATGAAGCTAA TCGCCGCCGCGACCAGCAGTCGCC CCTG GGCGAC-ACTGGTCGCGGGTACCA GCTTGCCGATGAGGT yrbE3A 2191852 - 2192256 + | hypothetical integral membrane protein JTY_1989 2192341 - 2193189 + | hypothetical protein JTY_1990 2194597 - 2193152 - | permease TERM 1141 2194210 - 2194169 - G 71 -9.6 -3.88291 | gap 2 CAGCACGCCGATAAA GCCGAGAAAC-G-TCAGCGT CTTC ACACTGAACAGTTGCTCGGC GTCGGCCCAGGCCTT TERM 1142 2194764 - 2194743 - R 72 -13.7 -2.71712 | overlap 2194742 TCCGCCGCCCCAAAT CCGCGCAGT GACC ACCGCGCGG TCCTCGCGAGTCTAG mpt64 2195462 - 2194776 - | immunogenic protein MPT64 nrdF 2196621 - 2195653 - | ribonucleoside-diphosphate reductase subunit beta JTY_1993 2197265 - 2196846 - | hypothetical protein TERM 1143 2197454 - 2197421 - H 72 -3.7 -4.62069 | gap 1, opp_overlap 2197439 2197443 GCGCGACTCCAAAAA CGCCAGCTGGGCAGAC AGG GCATGCCG-GATGGCG GCAGTCTTGCTGGTG PE_PGRS35 2197677 - 2199353 + | PE-PGRS family protein cfp21 2199994 - 2199341 - | cutinase precursor JTY_1996 2201335 - 2200424 - | chromosome replication initiation inhibitor protein JTY_1997 2201444 - 2202043 + | integral membrane protein JTY_1998 2202459 - 2202887 + | chitinase JTY_1999 2203113 - 2203652 + | methyltransferase JTY_2000 2204732 - 2204172 - | hypothetical protein JTY_2001 2205070 - 2204729 - | putative transcriptional regulatory protein JTY_2002 2205649 - 2205314 - | putative dehydrogenase JTY_2003 2206082 - 2205738 - | hypothetical protein ctpG 2208739 - 2206424 - | putative metal cation transporter P-type ATPase G JTY_2005 2209008 - 2208736 - | hypothetical protein JTY_2006 2209417 - 2209061 - | putative transcriptional regulatory protein JTY_2007 2209574 - 2210341 + | hypothetical protein TERM 1144 2210833 - 2210850 + G 73 -14.1 -3.16881 | GGCTACCGAGGTCAG GGCGCCG TAGC CGGCGCC TTGCTGGGATCGGTC TERM 1145 2210926 - 2210950 + G 73 -12.7 -3.41051 | CCCGAGGAGCCGCGA CCGGCGCGCCC GCC GCACGCGCCGG TTGTGGTGGGCATCG JTY_2008 2210437 - 2211390 + | hypothetical protein ctpF 2211592 - 2214309 + | putative metal cation transporter P-type ATPase A JTY_2010 2215154 - 2214378 - | hypothetical protein TERM 1146 2214674 - 2214660 - G 71 -9.2 -3.87815 | opp_overlap 2214673, overlap 2214663 GGCCAGTGGGACAAA GACGCC GTC GGCGCC GGCATCGACGTAGCG JTY_2011 2216571 - 2215249 - | putative integral membrane protein TERM 1147 2215995 - 2215975 - G 83 -8.2 -4.66833 | overlap 2215977 GGCGAACGCGAAAAA CAGCAGGC CGGCC GCCTGCAG CATCCCCCAGACGTG TERM 1148 2215993 - 2215977 - G 73 -9.4 -3.94933 | overlap 2215975 CGAACGCGAAAAACA GCAGGC CGGCC GCCTGC AGCATCCCCCAGACG TERM 1149 2216455 - 2216422 - G 80 -13.7 -3.73534 | overlap 2216429 CAACCCGAGCAACAA CCCAGAACCGGCCGC GTAC GCGGCCGGGGCCAGG GCGGCAAAGATTCCG TERM 1150 2216448 - 2216429 - G 85 -16.4 -3.48153 | overlap 2216422 AGCAACAACCCAGAA CCGGCCGC GTAC GCGGCCGG GGCCAGGGCGGCAAA JTY_2012 2216642 - 2218255 + | hypothetical protein JTY_2013 2218265 - 2219017 + | hypothetical protein fabG3 2219093 - 2219875 + | putative 20-beta-hydroxysteroid dehydrogenase JTY_2015 2220853 - 2219996 - | hypothetical protein TERM 1151 2220680 - 2220638 - G 95 -20.5 -2.64616 | GGGTGAGTCATACCA GGCGTCGTAGGCCGCCGCG TCGCG CCCGGCGGCCGACGATGCC GGCATCCGGGTGTCA JTY_2016 2222407 - 2220911 - | hypothetical protein TERM 1152 2221310 - 2221294 - G 75 -9.3 -4.13767 | opp_overlap 2221293 2221296 GCCCGGAGTCCAAAA CGCCGGG CTC CCCGGTG ATTACTCCGCAATCG JTY_2017 2223316 - 2222429 - | hypothetical protein TERM 1153 2224562 - 2224517 - g 83 -9.5 -4.3129 | CAGCCATCACCAAAA CGCCGCCGCCACTGCCGCT ATCGACGG ATTGGCCGAGGCGGCAGCG CAATTGGCCGACGCA otsB1 2223435 - 2227418 + | putative trehalose-6-phosphate phosphatase fdxA 2227861 - 2227517 - | putative ferredoxin TERM 1154 2228010 - 2227983 - R 74 -4.8 -4.63218 | gap 1 CGGGGTGCAAGAAAA CCG-GGGCGGT TCACCCG ACCGCCAGCGG GATTCACGCTCCCCC JTY_2020 2229375 - 2228050 - | hypothetical protein JTY_2021 2229463 - 2229705 + | hypothetical protein JTY_2022 2229706 - 2230104 + | hypothetical protein JTY_2023 2230718 - 2230287 - | hypothetical protein JTY_2024 2230759 - 2231253 + | hypothetical protein TERM 1155 2232385 - 2232427 + GF 74 -2.6 -4.7657 | overlap 2232386 2232426 CGTCGTCTTTCCGGG TGTGGGGTTGTTCGCTGA CCTTGAC TCGCCGATCAGCCTCGCG TTTTTGACGTTTTTG TERM 1156 2232426 - 2232436 + GF 71 -3.2 -4.60924 | overlap 2232385 CGCCGATCAGCCTCG CGTT TTT GACG TTTTTGCCCCGTTTC JTY_2025 2231957 - 2232574 + | putative transposase JTY_2026 2232528 - 2233118 + | putative transposase JTY_2027 2234502 - 2233246 - | hypothetical protein JTY_2028 2234856 - 2235431 + | hypothetical protein JTY_2029 2235428 - 2236468 + | hypothetical regulatory protein JTY_2030 2236710 - 2237429 + | hypothetical protein JTY_2031 2237419 - 2237835 + | hypothetical protein JTY_2032 2238150 - 2237851 - | hypothetical protein JTY_2033 2238540 - 2238235 - | hypothetical protein JTY_2034 2239154 - 2238549 - | hypothetical protein JTY_2035 2239538 - 2239179 - | hypothetical protein JTY_2036 2240375 - 2239698 - | hypothetical protein JTY_2037 2241666 - 2240770 - | hypothetical protein JTY_2038 2246670 - 2241850 - | hypothetical protein TERM 1157 2244522 - 2244478 - G 100 -20 -3.14344 | gap 1 CAGCCCGGCCAGGAA CTGCTCGAACGCCGCCGCCGC CGTA GCGTCGGCGCCGC-CGAGCAG GGCGTGGATACGGGT TERM 1158 2245800 - 2245820 + g 77 -12.5 -3.72893 | opp_overlap 2245783, overlap 2245801 CCACGGTCAGGCCCT GGGCGCACC TGC GGTGCGCCA TTTCGTGCAGCAATA TERM 1159 2245801 - 2245819 + g 76 -16 -2.83522 | opp_overlap 2245783, overlap 2245800 CACGGTCAGGCCCTG GGCGCACC TGC GGTGCGCC ATTTCGTGCAGCAAT TERM 1160 2246049 - 2246010 - G 77 -12.1 -3.72742 | gap 2, opp_overlap 2246012 2246030, overlap 2246011 GCACCAGCAACAGAA TCCGCGCGC-T-GCCGCCG TTGT CGGCGGCGATGCGCTCGGC GATCTTGAGCGCGGT TERM 1161 2246048 - 2246011 - G 76 -15.6 -2.83163 | gap 2, opp_overlap 2246012 2246030, overlap 2246010 CACCAGCAACAGAAT CCGCGCGC-T-GCCGCCG TTGT CGGCGGCGATGCGCTCGG CGATCTTGAGCGCGG JTY_2039 2248178 - 2247180 - | hypothetical protein JTY_2040 2249177 - 2248293 - | hypothetical protein JTY_2041 2250938 - 2249217 - | histidine kinase response regulator TERM 1162 2250074 - 2250088 + g 77 -10 -3.90112 | CGATCGACGTTCCGC TGACGG CAA CCGTCA TTTGCTTGACCGCCG JTY_2042 2251838 - 2250999 - | hypothetical protein pfkB 2252854 - 2251835 - | putative phosphofructokinase TERM 1163 2252441 - 2252426 - G 81 -11.8 -3.96327 | ACTGGCCACCACAAA GGCGGC CGAA GCCGCC GCACCGCGCAGTTCG JTY_2044 2254916 - 2252871 - | hypothetical protein TERM 1164 2253500 - 2253516 + g 80 -9.4 -4.26076 | AATACACCTCTGCGT CGCGCA CCGTC TGCGCG TTTTGCTGGGCGTAG TERM 1165 2254236 - 2254195 - G 73 -14.4 -3.21395 | gap 1, overlap 2254193 ACTCTGCGCAGAACA TCGGCCGCCGTTGACGCCG CGGGC CGGCG-CAGCGACGGCCCA GCGGTCGGGGTGGCC hspX 2255362 - 2254928 - | heat shock protein JTY_2046 2255559 - 2256554 + | hypothetical protein Acg JTY_2047 2257512 - 2256670 - | hypothetical protein JTY_2048 2257724 - 2258047 + | putative ArsR-type repressor protein JTY_2049 2258044 - 2258532 + | hypothetical protein JTY_2050 2258529 - 2259170 + | hypothetical protein JTY_2051 2260151 - 2259177 - | putative transmembrane protein JTY_2052 2261226 - 2260153 - | putative sugar-transport ATP-binding protein ABC transporter JTY_2053 2262071 - 2261229 - | putative sugar-transport integral membrane protein ABC transporter JTY_2054 2262960 - 2262058 - | putative sugar-transport integral membrane protein ABC transporter JTY_2055 2264276 - 2262957 - | putative sugar-binding lipoprotein TERM 1166 2263750 - 2263793 + g 72 -5.8 -4.30719 | CTCCATGGCCGTTCC CAGCTACCGGGCGGCGGTGG CACG CCGGCGTCGTCGAATAGCTG TTTGTTGTAGAACAA JTY_2056 2265111 - 2264314 - | hypothetical protein pncA 2265671 - 2265111 - | pyrazinamidase/nicotinamidase JTY_2058 2266029 - 2265712 - | hypothetical protein lipT 2267650 - 2266115 - | putative carboxylesterase TERM 1167 2266282 - 2266266 - G 74 -12.3 -3.54459 | opp_overlap 2266262, overlap 2266269 CCAATTTGGCTGAAA CAACGCC AGC GGCGTTG CACCTCGTTGCTGAC TERM 1168 2266279 - 2266269 - G 70 -8.2 -3.90922 | opp_overlap 2266262, overlap 2266266 ATTTGGCTGAAACAA CGCC AGC GGCG TTGCACCTCGTTGCT lppI 2267699 - 2268355 + | putative lipoprotein JTY_2061 2270956 - 2268392 - | hypothetical protein pks12 2283416 - 2270961 - | putative polyketide synthase TERM 1169 2277050 - 2277024 - G 75 -11.5 -3.63515 | opp_overlap 2277044 CCCCACCCCGAAGAA GGCGGGGTCGA AGTCG CCGACCCCGTC CACAAAGCCGCCGGT TERM 1170 2277044 - 2277102 + g 100 -22.2 -3.48276 | opp_overlap 2277024 2277057 GGTCGAAGTCGCCGA CCCCGTCCACAAAGCCGCCGGTGCGGGT GTA GCACGCACCCGCGGCGTCGGGGTCGGGG TTGTATAGCCCGGCC TERM 1171 2277089 - 2277057 - G 91 -16.2 -3.86015 | opp_overlap 2277044 GACCCCGTCCACAAA GCCGCCGGTGCGGG TGTAG CACGCACCCGCGGC GTCGGGGTCGGGGTT TERM 1172 2283515 - 2283505 - R 73 -6.8 -4.37092 | overlap 2283506 2283508 AGTTGCTGCACAAAA CGAC GCC GTCG TACGGCGCTCTGGCG JTY_2063 2283947 - 2283723 - | hypothetical protein TERM 1173 2284338 - 2284316 - g 75 -15.6 -2.73681 | overlap 2284303 GACCGACCGCAACCA CGACCTGGCG CCG CGCCAGATCG CGCGGTACCGCACCG JTY_2064 2284251 - 2284586 + | hypothetical protein ppm1 2287185 - 2284561 - | polyprenol-monophosphomannose synthase TERM 1174 2285188 - 2285246 + g 80 -16.8 -2.78384 | gap 3 GTGCATCACGTGGGT GCGGCCGGGATCGGC-CTGCGCCAGCTCG TCGG CGAGCTGGC-CGGTGCCG-TCGGGGCTGC TGTCGTCGACGACCA JTY_2066 2288947 - 2287343 - | hypothetical protein TERM 1175 2287688 - 2287676 - G 74 -10.5 -3.76224 | GGCCCAGGGATCAAA GCCCG TGA CGGGC GCGTCGGAGCCAAGC TERM 1176 2288209 - 2288151 - G 72 -7.3 -4.24342 | overlap 2288152 CCGTCGACGAACAAA TCACCGG-CCAGCCCTCGAGCCCCGGT CTCGGTC ACCAGGTCACG-GGCCTGGGCCGGCGT GGCCACGGCCTCACC fxsA 2289479 - 2288952 - | possible transmembrane protein TERM 1177 2289615 - 2289637 + G 73 -14.8 -2.83715 | CTGCTGGGCCTTCCC CCCGGCCAGG GCC CGTGGCCGGG TGTGGTGGTGGTGCA JTY_2068 2289555 - 2290268 + | hypothetical protein TERM 1178 2290431 - 2290419 - T 74 -4.7 -4.57569 | opp_overlap 2290412 2290420 2290424, overlap 2290420 2290421 TCAGCTGGCGAAAAA TGCGC GCG GCGCC CTCTTCGTTGCCTGA rpsR2 2290783 - 2290517 - | 30S ribosomal protein S18 rpsN2 2291089 - 2290784 - | 30S ribosomal protein S14 rpmG1 2291255 - 2291091 - | 50S ribosomal protein L33 rpmB2 2291491 - 2291255 - | 50S ribosomal protein L28 TERM 1179 2291285 - 2291321 + g 70 -8.6 -3.93236 | gap 1, overlap 2291282 CTGGCGACGCAGGCG GGCCA-CGACCGCTTCG ATAC CGTCGCGGTCGATGACC TTTATACCCTTCGTG TERM 1180 2292971 - 2292991 + G 70 -11.1 -3.55444 | overlap 2292932 2292990 TCGCCGCGATCGCGA CCTCGGTGG TCT TCGCCGAGG TTTCCGCCGTCGGCG JTY_2073 2291604 - 2293139 + | hypothetical protein JTY_2074 2293515 - 2293111 - | hypothetical protein TERM 1181 2293584 - 2293542 - R 100 -27.3 -2.78596 | gap 1, opp_overlap 2293542 2293549, overlap 2293529 2293549 TACCGCGCGAGCAGA CGCAGAATCGCACTGCGCGG GGTC CCGCGCA-TGCGATTCTGCG TCTGCTCGCCGTACT TERM 1182 2293542 - 2293584 + r 100 -27.3 -2.79302 | gap 1, opp_overlap 2293529 2293542 2293549, overlap 2293549 TACCGCGCGAGCAGA CGCAGAATCGCACTGCGCGG GGTC CCGCGCA-TGCGATTCTGCG TCTGCTCGCCGTACT TERM 1183 2293577 - 2293549 - R 85 -15.4 -3.40299 | gap 1, opp_overlap 2293549 2293542, overlap 2293529 2293542 CGAGCAGACGCAGAA TCGCACTGCGCGG GGTC CCGCGCA-TGCGA TTCTGCGTCTGCTCG TERM 1184 2293549 - 2293577 + r 85 -15.4 -3.40299 | gap 1, opp_overlap 2293529 2293542 2293549, overlap 2293542 CGAGCAGACGCAGAA TCGCACTGCGCGG GGTC CCGCGCA-TGCGA TTCTGCGTCTGCTCG cobN 2297183 - 2293599 - | putative cobalamin biosynthesis protein TERM 1185 2293922 - 2293948 + g 72 -15.1 -2.78384 | opp_overlap 2293938 TCCACCTCGGATTGA CCACGCGGGCG CGAAA CACCCGCGTGG TCTCCTCCGACAGCG TERM 1186 2294517 - 2294466 - G 70 -2.1 -4.68593 | gap 3 GGCATCACGGAAAAA GCCGG-AGATCCGTACCGTCACGTCG ATG CG-CGGG-CGGCCCAGCTCGGCCGGC TGCATGGGCGCCAGG TERM 1187 2296497 - 2296518 + g 72 -14.4 -3.05384 | GCTGTCATCGTCGCC GCCGGCCG AGGCGG CGGCCGGC TTGACTCCCCCGGCG JTY_2076 2297261 - 2297494 + | hypothetical protein TERM 1188 2298020 - 2297995 - g 93 -19.1 -3.2963 | ATCACCGCGGCACAA CTGGCGACGCT GGCC AGCGTCGCCAG CGACTTCGGCTCCGC cobG 2297881 - 2298972 + | putative cobalamin biosynthesis protein TERM 1189 2299437 - 2299469 + G 77 -12.7 -3.74693 | gap 1, opp_overlap 2299429 CGACGAAGGGGCACC CCCACCGG-CGGCC GTGCTG GGCGGACCGGTGGG TTTCGTCGGATCGGC cobH 2298982 - 2299608 + | precorrin-8X methylmutase JTY_2080 2302300 - 2301077 - | hypothetical protein cobI 2299605 - 2301131 + | putative CobI-CobJ fusion protein blaC 2303239 - 2302316 - | class A beta-lactamase sigC 2303374 - 2303931 + | RNA polymerase sigma factor cobK 2304616 - 2303921 - | cobalt-precorrin-6x reductase cobM 2305408 - 2304653 - | putative precorrin-4 C11-methyltransferase TERM 1190 2305088 - 2305074 - G 72 -8.5 -4.07568 | GCGGCTGCGGCAAAA GCCGG TACGC CCGGC ACGATTTCGTAGCCG cobLb 2306289 - 2305405 - | putative precorrin-6y methyltransferase TERM 1191 2305676 - 2305650 - GR 85 -5.1 -5.07486 | gap 1, overlap 2305651 2305654 CACCGCCAAGAAAAA TCACCGACGGCC GTGC GGC-GTCGTCGA ACGCATCGGGCGCGT TERM 1192 2306175 - 2306194 + gr 70 -12.8 -2.90392 | opp_overlap 2306163, overlap 2306177 GCACGATGGCCCGGC CGCCGCGG CGCA CCGCGGTG TGTGGTTGCGCGGTG cobLa 2306419 - 2306231 - | putative precorrin-6y methyltransferase JTY_2087 2307282 - 2306494 - | putative hypothetical exported or envelope protein JTY_2088 2307691 - 2307440 - | hypothetical protein JTY_2089 2308697 - 2307726 - | putative transmembrane protein TERM 1193 2308074 - 2308131 + g 70 -11.1 -3.54488 | gap 1, opp_overlap 2308061 GATCGGATCGGAGTA CGGTCCGTCGGCTCCACCGGACGGGTGT GGC GCTCCTGGC-GGTGGAGGTGTTGGGCCG TCTTGTTTGAAGAAG TERM 1194 2308315 - 2308345 + g 75 -6.8 -4.3586 | gap 1, overlap 2308313 TGAGCCTGAGCTAGT CGA-GCGGCCTGC ACTGCA GCCGGCTGCGTCG TTTTGGTGTCGGTGA JTY_2090 2308997 - 2308698 - | hypothetical protein JTY_2091 2309462 - 2309776 + | hypothetical protein JTY_2092 2309758 - 2311728 + | hypothetical protein lppJ 2311709 - 2312272 + | putative lipoprotein JTY_2094 2312914 - 2312468 - | putative transmembrane protein JTY_2095 2313118 - 2315205 + | hypothetical protein TERM 1195 2315976 - 2315963 - g 75 -9.5 -4.0896 | AAAGCCGGTCGAAAA GCGCG TGAC CGCGC CTGCGGTCCCCAATG JTY_2096 2315202 - 2316146 + | hypothetical protein TERM 1196 2316923 - 2316943 + G 74 -7.5 -4.1899 | GCGACGCTCGCACGC TGCTGACCG ATC TGGACAGCA TTTTGCGTGAGATGC JTY_2097 2316139 - 2317134 + | hypothetical protein JTY_2099 2317369 - 2317674 + | hypothetical protein JTY_2100 2317653 - 2318258 + | hypothetical protein JTY_2101 2318336 - 2318566 + | hypothetical protein TERM 1197 2319313 - 2319327 + G 70 -6.4 -4.25104 | overlap 2319314 TGCTGCGCCGGAAGT TCTTGC AGG GCAAGG TTTTGATGGCCGGGC TERM 1198 2320018 - 2319985 - g 81 -8.1 -4.63527 | gap 1, overlap 2319986 2319987 TGATGACGTCAAAAA CTTCGTGGGCATCCAG AAC CTGGTCGCCCATG-AG CCAATGCTTCAACCC pknJ 2318753 - 2320522 + | putative transmembrane serine/threonine-protein kinase J pepE 2321666 - 2320539 - | putative dipeptidase TERM 1199 2321491 - 2321474 - G 77 -14.1 -3.40403 | GCCGCGGCAGCACAA CCGCCGG CGCA CCGGCGG CCGGCAACACCAACG JTY_2104 2321715 - 2322782 + | 5'-3' exonuclease TERM 1200 2322771 - 2322759 - T 74 -2.6 -4.91109 | GCGCGACTACAAAAA GCGC TCGAC ACGC TGCCCGGATGACGAT JTY_2105 2323520 - 2322786 - | hypothetical protein helY 2326282 - 2323562 - | putative ATP-dependent DNA helicase tatC 2327257 - 2326331 - | putative sec-independent protein translocase transmembrane protein TERM 1201 2326769 - 2326754 - G 85 -5.4 -5.07486 | GACGGTCAACAAAAA GCCCAA CGCC TTGGAC AACACCAGGTAGGCC tatA 2327525 - 2327274 - | putative arginine translocase protein A JTY_2109 2328543 - 2327593 - | hypothetical protein TERM 1202 2328117 - 2328137 + g 78 -10.3 -4.06678 | TCCGCACCGCGGCCC GTACGGCCG CGG CGGCCGGGC TTTCTGTGGGTGCCT JTY_2110 2329538 - 2328540 - | hypothetical protein JTY_2111 2330905 - 2329547 - | hypothetical protein TERM 1203 2329723 - 2329752 + g 70 -6.4 -4.258 | gap 1, overlap 2329725 GCCGGGCCCGGGTGG TCTGTGGGGGCTG ATCGA CGGCCTCCGC-GA TTTCTTCGTCGGTGG PE_PGRS36 2332432 - 2330957 - | PE-PGRS family protein TERM 1204 2331131 - 2331100 - G 75 -13.6 -3.38812 | opp_overlap 2331121 2331124, overlap 2331098 2331101 CGTCGCCGAACAAGA TGGCGGTGCCGCCG TGCC CGCCGACACCGCCC GGCCCGCCGGGCGAG TERM 1205 2331130 - 2331101 - G 80 -17.1 -2.63073 | opp_overlap 2331121 2331124, overlap 2331098 2331100 GTCGCCGAACAAGAT GGCGGTGCCGCCG TGCC CGCCGACACCGCC CGGCCCGCCGGGCGA TERM 1206 2333035 - 2333056 + G 79 -7.9 -4.43844 | GCGGCGTTGTTTTTG GCCGGGCAT CTTG GTGCGCGGC TTTTCTCGATCATCG JTY_2113 2332615 - 2334267 + | hypothetical protein TERM 1207 2334388 - 2334368 - f 71 -9.7 -3.68569 | overlap 2334371 2334374 GCACCTATCCAAGAA GACCAACCG CTA CGATCGGTC GATGTCGCGGCGCCG TERM 1208 2335260 - 2335281 + G 77 -12.3 -3.63627 | gap 1 CGTCGGTATCGGCAC CGTCGGCCCG GCG CGGGC-GACG TTTCGGCTGTCCGAA TERM 1209 2336071 - 2336100 + G 77 -3.4 -4.9218 | overlap 2336072 2336073 GCGACGCTGCGTCCC TACCAGCAGCGC GGTCTG GCGTGGCTGGCG TTTTTGTCCTCGCTC helZ 2334466 - 2337507 + | putative helicase JTY_2115 2337617 - 2338333 + | hypothetical protein JTY_2116 2338746 - 2338312 - | hypothetical protein JTY_2117 2339007 - 2338753 - | hypothetical protein TERM 1210 2339344 - 2339366 + H 76 -13.4 -3.23979 | overlap 2339361 ACGGGAAGTCCTTCT GCGGCCATCG TTG CTATGGCCGC TTACTGCCTTCTAGT TERM 1211 2339607 - 2339621 + H 84 -4.2 -5.24129 | ACCGACTCCACTCTA GCTAGT GAT ACAAGC TTTTTTGTAGCCGCG PE22 2340227 - 2340523 + | PE family protein PPE36 2340579 - 2341310 + | PPE family protein prcA 2342596 - 2341850 - | proteasome subunit alpha prcB 2343468 - 2342593 - | proteasome subunit beta JTY_2122 2343659 - 2343465 - | hypothetical protein TERM 1212 2343587 - 2343639 + g 86 -16.9 -3.32727 | overlap 2343583 2343588 CGCGACGCTCCTGGC CCGCGGCGGTGCTGCCGGCGATG TCGTCAT CATCGCCGCCGCCACCGCCACGC TTGGTCTGCTCTTGC TERM 1213 2343588 - 2343638 + g 95 -20.4 -2.59154 | overlap 2343583 2343587 GCGACGCTCCTGGCC CGCGGCGGTGCTGCCGGCGATG TCGTCAT CATCGCCGCCGCCACCGCCACG CTTGGTCTGCTCTTG TERM 1214 2343693 - 2343723 + r 73 -8.1 -4.05033 | opp_overlap 2343693, overlap 2343697 CATGGCCTTTCAAAA GGCCGCGGGTGCG CGTCA CACGCCCGCTGTC TTTCTCTACCCTACC JTY_2123 2345379 - 2343772 - | hypothetical protein TERM 1215 2346041 - 2346070 + G 82 -4.9 -4.91109 | gap 1, opp_overlap 2346041 2346045 2346046, overlap 2346042 2346046 2346056 2346057 TGATGGCCGCCAACA TCAACGGCGAGCGG CTG CCGCTGGC-GATGG TTTTTCTGCTCGCCA JTY_2124 2345440 - 2346633 + | putative integral membrane protein TERM 1216 2346831 - 2346821 - g 76 -8.2 -4.21607 | overlap 2346817 GCCACCGAACACAAA GCGG CCA CCGC CCTGCTCAACGGTCC JTY_2125 2346644 - 2347267 + | hypothetical protein JTY_2126 2349100 - 2347271 - | putative ATPase TERM 1217 2348142 - 2348160 + g 75 -4.4 -4.63218 | opp_overlap 2348120, overlap 2348144 GCCTCGTGGGCATCG TCGCCGCG GAC CTCGGCCA TTTTCTTGGCCAACG lppK 2349381 - 2349950 + | putative lipoprotein JTY_2128 2349958 - 2350251 + | hypothetical protein JTY_2129 2351122 - 2350280 - | putative RNA methyltransferase JTY_2130 2351196 - 2352032 + | hypothetical protein JTY_2131 2352537 - 2352055 - | putative integral membrane protein hisG 2353470 - 2352616 - | ATP phosphoribosyltransferase hisE 2353754 - 2353473 - | phosphoribosyl-AMP pyrophosphatase PPE37 2353881 - 2355275 + | PPE family protein metH 2358850 - 2355272 - | putative 5-methyltetrahydrofolate--homocystein methyltransferase TERM 1218 2355782 - 2355758 - G 82 -4.8 -4.91712 | overlap 2355762 GGCAATGCACAAAAA CCGACCGCGC TGCTG GCGCGGGAAG TGAAACCGGTAGCGC TERM 1219 2358987 - 2358944 - H 86 -16.8 -3.22102 | gap 1, overlap 2358942 ACAGCTGCCACAAGA GTCTCAGCTGAGGCAGGCACA CAA CGTGCCCACCTCAGC-GCGAC AAAGCGTGGCCATCG JTY_2136 2359076 - 2359954 + | hypothetical protein PE_PGRS37 2360755 - 2359985 - | PE-PGRS family protein TERM 1220 2360302 - 2360270 - G 72 -14.1 -3.05384 | overlap 2360288 GCCGCGGCCACCGAA GGCGTTACCACCCCC AAA GGCGCTGGCAACGCC GCCGCCACCGGTCCC TERM 1221 2361919 - 2361939 + G 90 -2.6 -5.40072 | gap 1, overlap 2361910 2361919 2361920 TTCTCGCGCTGATGG C-GTTCCTA GTGG TGGGAACCG TTTTTTTGGCCGGGC TERM 1222 2362124 - 2362169 + G 81 -8.2 -4.54047 | opp_overlap 2362124 CGCCGAGCCGGAGAA GATCATGCCGCGGGCGATCA ATTCGG TGGTCGCTCGCATCGCGATC TTTTATGTCGGGTCG ansP1 2361399 - 2362868 + | putative L-asparagine permease JTY_2139 2362868 - 2363071 + | putative transmembrane protein JTY_2140 2363972 - 2363091 - | short chain dehydrogenase TERM 1223 2363802 - 2363849 + g 72 -14 -2.97171 | overlap 2363799 2363804 GTCGGCTACCACGGT GAGTAGGCGGTCGTCGCCGCCG AGTT CGGCGCCCATCACCGCCAGCTC TGATTTGCTCAGGTC cysS2 2365242 - 2363998 - | cysteinyl-tRNA synthetase cysQ 2366103 - 2365300 - | hypothetical protein JTY_2143 2366194 - 2366424 + | hypothetical protein JTY_2144 2367422 - 2366634 - | hypothetical protein TERM 1224 2366712 - 2366728 + g 78 -13.7 -3.59979 | CAGCGATTGCGCGCG TCGGCGC AGC GCGCCGA TTTCGGCTGCGGCGA JTY_2145 2368020 - 2367433 - | hypothetical protein JTY_2146 2368794 - 2368084 - | hypothetical protein TERM 1225 2368502 - 2368520 + g 75 -3 -4.84359 | overlap 2368473 2368472 ACCCGCCACAACGGC TCGTCGAC CAG GTCACCGA TTTTTCTGCCAGTCC JTY_2147 2369621 - 2368791 - | undecaprenyl pyrophosphate phosphatase TERM 1226 2368915 - 2368893 - G 79 -11.2 -3.96148 | GTGTCGCACCAGAAA CCGCAGCAGC CAG GCCACCGCGG TCAGACCGAGGACGA JTY_2148 2370098 - 2369685 - | hypothetical protein TERM 1227 2370409 - 2370434 + G 79 -4.7 -4.82901 | gap 1 CATCATGGTCTTCGA TGACGTGCACGT TGC ACC-GCGCGTCA TTTTTCTGCCGGGCC lppL 2370113 - 2371189 + | putative lipoprotein TERM 1228 2371962 - 2371951 - g 84 -7.2 -4.78753 | opp_overlap 2371958, overlap 2371952 2371953 GCAAGACCAAGAAAA CGCC GGCC GGCG ACGCGGTCAACGACT pyrD 2371503 - 2372576 + | dihydroorotate dehydrogenase 2 TB18.6 2373111 - 2372581 - | hypothetical protein JTY_2152 2374505 - 2373159 - | hypothetical protein TERM 1229 2373985 - 2373949 - G 79 -10.8 -3.92075 | overlap 2373950 ACGGTTAGCGAGAAA CCGCCGACTTCACCGA TTGCC TCGGTGATGCCGTCGA ACAGATCGGGCCTAT JTY_2153 2375293 - 2374976 - | hypothetical protein TERM 1230 2376135 - 2376145 + G 75 -6.8 -4.36914 | opp_overlap 2376134 2376135 ATGCGACCGATGAAT CCAC CAA GTGG TTTTCTCCGGCGGAC JTY_2154 2375760 - 2376818 + | hypothetical protein JTY_2155 2377304 - 2376948 - | putative transmembrane protein wag31 2378181 - 2377399 - | hypothetical protein JTY_2157 2378739 - 2378449 - | putative transmembrane protein JTY_2158 2379626 - 2378901 - | hypothetical protein JTY_2159 2380399 - 2379623 - | hypothetical protein yfiH 2381157 - 2380405 - | hypothetical protein ftsZ 2382307 - 2381168 - | cell division protein TERM 1231 2382448 - 2382470 + r 85 -6.1 -5.10077 | overlap 2382449 GTTGCTAACCGTGCA GGCGCGCCG ATACG CGGCGGGCA TTTTTTCGGCTATTT ftsQ 2383424 - 2382480 - | putative cell division protein TERM 1232 2383429 - 2383452 + r 83 -15.2 -3.17075 | TGTTCCGTCATCCCA GCACCCCCGG ACGG CCGGGGGCGC TTCGGTTGGCCCGGA murC 2384905 - 2383421 - | UDP-N-acetylmuramate-L-alanine ligase murG 2386134 - 2384902 - | N-acetylglucosaminyl-N-acetylmuramyl transferase TERM 1233 2385752 - 2385737 - GR 70 -10.4 -3.66999 | overlap 2385738 2385741 ACGTACCCACCGAAA CCGACG ACGA CGTCGG CGTCGACATCGTCGA TERM 1234 2385766 - 2385741 - GR 77 -15.5 -2.66451 | overlap 2385737 2385738 ACCCACCGAAACCGA CGACGACGTCG GCGT CGACATCGTCG AGCACGTCCCGGGCC TERM 1235 2386107 - 2386058 - GR 73 -11.4 -3.54029 | opp_overlap 2386068, overlap 2386061 GGCGAGGAACCACAA GAC-GGCGAGGCGGCATCGGCG GGCCGGGG CGCCGTTGCC-CCGCGCCCGCC GGCCGGCTGGCTGAC ftsW 2387704 - 2386034 - | FtsW-like protein TERM 1236 2386119 - 2386061 - G 77 -16.7 -2.60161 | gap 3, opp_overlap 2386068, overlap 2386058 GAGGAACCACAAGAC GGCGAGGCGGCATCGGCGGGC-CGGGGC GCCGTT GCCCCGCGCCCGCCG--GCCGGCTGGCT GACCGTGTCCTTCAC TERM 1237 2387595 - 2387571 - GR 73 -11.3 -3.66999 | AGCCAGGCACCGAAA CGGGTGCGGGG CCT CGCCGAACCCG GGTTAGAGGCTTCTT murD 2389176 - 2387716 - | UDP-N-acetylmuramoyl-L-alanine-D-glutamate synthetase mraY 2390257 - 2389178 - | phospho-N-acetylmuramoyl-pentapeptide- transferase murF 2391786 - 2390254 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligase TERM 1238 2391069 - 2391093 + g 74 -9.9 -3.88766 | CGACCGCTCCGGAAT GCGGAACAGCC TGC GGCAGTTCGGC TTTGGTCTGTGCGAT murE 2393390 - 2391783 - | UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase TERM 1239 2392005 - 2392031 + g 72 -13 -3.14463 | GGCCGCCCCAGCCAG GATTTCGCGGCG GAT CGCCGTGGGATC TTCGTCACGCGGGTT JTY_2170 2394447 - 2393413 - | hypothetical protein JTY_2171 2395064 - 2394444 - | hypothetical protein TERM 1240 2395011 - 2395036 + g 70 -11.1 -3.53091 | gap 1, overlap 2395032 CGAGGCGATATCCAT CGCGGCGCGCAG GAT CTGCGC-CCGGG TTTGGCGGCCGACGT JTY_2172 2395923 - 2395057 - | hypothetical protein PE_PGRS38 2397498 - 2396026 - | PE-PGRS family protein TERM 1241 2396667 - 2396689 + g 86 -16.2 -3.55444 | CGTTGCCGATCAGCC CGGCGGCGCC GCC GGCACCGCCG TTTCCGCCGTGCACC TERM 1242 2397706 - 2397678 - R 79 -13.8 -3.53031 | gap 1, overlap 2397674 2397679 TGGAGCCGAAACGAA CCGGCGCGCGCCG TTAC CGGCGC-CGCCGC CCTAGGTGGCCTGCA TERM 1243 2397705 - 2397679 - R 84 -17.3 -2.71497 | gap 1, overlap 2397678 2397674 GGAGCCGAAACGAAC CGGCGCGCGCCG TTAC CGGCGC-CGCCG CCCTAGGTGGCCTGC pbpB 2399747 - 2397708 - | putative penicillin-binding membrane protein TERM 1244 2398133 - 2398158 + g 78 -14.7 -3.22298 | GCGGTTCTTCGGTCC GGCTGCCGTCG GGTG CGACGGTGGCC TTGATAATGCGTGGG JTY_2175 2400898 - 2399744 - | putative proline rich membrane protein TERM 1245 2399875 - 2399932 + g 78 -15.5 -3.09018 | gap 1, overlap 2399875 CGGGCGTCGCAGCCA CCGGTGCTGGTCCAGG-GAGCCCGGC CGGGGGC GCCGCACCCACCTGGAGCGGCACCGG ATTTTCCGCTGGTGC TERM 1246 2399875 - 2399933 + g 75 -9.5 -4.15565 | gap 2, overlap 2399875 CGGGCGTCGCAGCCA -CCGGTGCTGGTCCAGG-GAGCCCGGC CGGGGGC GCCGCACCCACCTGGAGCGGCACCGGA TTTTCCGCTGGTGCC TERM 1247 2400825 - 2400870 + g 89 -11.2 -4.19817 | gap 1 GTCGTTCGCCTCGTC GCCGCGGCAG-GACTGTCG GCTCTCCTG CGACGATCGCTGCTGCGGC TTTTCGGTGCCTCAC mraW 2402085 - 2400895 - | S-adenosyl-methyltransferase JTY_2177 2402518 - 2402087 - | hypothetical protein TERM 1248 2402846 - 2402822 - R 100 -14.9 -5.27938 | opp_overlap 2402831 ACGCCCAAACAAAAA GCGGGACCGCC GAT GGCTGCCCCGC TGCCGCTGGTTGCGT JTY_2178 2403271 - 2402867 - | putative transmembrane protein JTY_2179 2403537 - 2404157 + | hypothetical protein lppM 2404253 - 2404936 + | putative lipoprotein JTY_2181 2405838 - 2404933 - | hypothetical protein idsA2 2406149 - 2407207 + | putative geranylgeranyl pyrophosphate synthetase JTY_2184 2409189 - 2408749 - | hypothetical regulatory protein JTY_2183 2407211 - 2408914 + | putative transmembrane protein pknL 2409244 - 2410443 + | putative transmembrane serine/threonine-protein kinase L TERM 1249 2410492 - 2410465 - T 100 -15 -4.12188 | gap 1, opp_overlap 2410458 CGAGCAGTCGCAAAA GCCCCCA-TTTCG GCA CGAAAATGGGGGC TGGTACGTGAATTAA JTY_2186 2411250 - 2410585 - | putative transposase TERM 1250 2410759 - 2410771 + g 73 -9.1 -3.9461 | CAGCTTGTGGGCGAC GGCGA TGA TCGCC TTCTTGTTGGCAGCG TERM 1251 2411583 - 2411611 + r 79 -9.6 -4.18506 | gap 1 CCGATTCTCATTCAC CATGAGCGGGCGC ACCA GCGCCCA-TCATG TTCTTTTACGACTGC aroG 2413023 - 2411635 - | putative 3-deoxy-D-arabino-heptulosonate7- phosphate synthase TERM 1252 2411882 - 2411846 - G 86 -5.9 -5.03314 | gap 1, opp_overlap 2411846, overlap 2411879 TGCACCTCGAAAAAA CCCTGCACTTC-ATCG ACAATG CGATCGAAGTGACGGG TCTTGAACCCCGTGG TERM 1253 2413116 - 2413138 + r 81 -16.2 -2.69468 | overlap 2413113 ACTGTCCGTCTCCTC AGCGGGCCGC GCC GCGGCCCGCA TCGTCTGTGGACGTG JTY_2188 2413620 - 2413114 - | hypothetical protein JTY_2189 2414517 - 2413630 - | putative integral membrane protein TERM 1254 2414497 - 2414452 - G 81 -16.1 -3.21194 | overlap 2414464 GACAAAGGCGACCAA GCAGCACAACAACGGCAGCCG GCCA CGGTCGACGATGTCGTGCTGC AGCCAGTGGAACACC JTY_2190 2414605 - 2415888 + | putative integral membrane protein JTY_2191 2416632 - 2415889 - | 1-acylglycerol-3-phosphate O-acyltransferase JTY_2192 2417113 - 2416718 - | hypothetical protein TERM 1255 2416809 - 2416837 + g 83 -15.9 -3.53224 | GACGCACCGGTCTGG CCGCCGCCCGGCG GGC CTTCGGGTGGCGG TTTCGCCGACCGGTC JTY_2193 2418249 - 2417110 - | hypothetical protein TB16.3 2418803 - 2418369 - | hypothetical protein TERM 1256 2418935 - 2418925 - R 71 -8.2 -3.9009 | overlap 2418916 AAGTTACCGGAGAAA CCCC GAT GGGG CGTGACCGTTCTAGC JTY_2195 2419297 - 2418908 - | hypothetical protein TERM 1257 2418958 - 2418972 + g 90 -4.2 -5.40072 | GTTCTAGCACTGTCT TGACCT CGA AGGCCA TTTTTTTGCCCGCGA JTY_2196 2419463 - 2419975 + | hypothetical protein TERM 1258 2420503 - 2420539 + GT 71 -12.2 -3.24425 | gap 1, overlap 2420485 2420496 GGTGGCAACTGCCGC GCCGCCGTCTCCGGCGG CGCG CCGCTGGGTGCG-CGGC TTGGTCACTTCTATC TERM 1259 2420670 - 2420658 - gT 70 -10.5 -3.55622 | CGGAACTGTCGGAAA GCCGG TGC CCGGC AACAGTCTACGCATC fadD15 2419738 - 2421264 + | putative long-chain-fatty-acid-CoA ligase JTY_2198 2422452 - 2421295 - | hypothetical protein TERM 1260 2422065 - 2422016 - G 73 -10.8 -3.72893 | gap 3 TAGCTGCTGACGAAA GTCACCACG-TCGGTGCCGTCGCCG ATG CGGCGT-AGCACCGATCG-AGCGAC CGGAAGCATCGACCA TERM 1261 2422136 - 2422113 - G 77 -16 -3.01712 | GCGTGCTGGCCAACA CCCGGCTAGC TCCA GCCAGCCGGG CACGCGGGGCCAGCA TERM 1262 2422473 - 2422440 - G 73 -13.9 -3.1552 | gap 1, overlap 2422438 CGTTAGTTACCAACA GGACCCGGCTCACCTG GGT CAGGCTAGC-GGGTCC ACCTTGCGTGAGCAG JTY_2199 2423322 - 2422549 - | hypothetical protein JTY_2200 2424574 - 2423417 - | hypothetical protein TERM 1263 2424345 - 2424362 + g 75 -6.9 -4.42238 | overlap 2424339 AGCTTCTGGTCGGCG GCCCGCT GGGC AGCGAGC TTTTCGTTGAGATCC trpD 2428045 - 2426933 - | anthranilate phosphoribosyltransferase JTY_2201 2425121 - 2427058 + | hypothetical protein ctaE 2428203 - 2428814 + | putative cytochrome c oxidase subunit III qcrC 2428855 - 2429697 + | putative ubiquinol-cytochrome c reductase qcrA 2429694 - 2430983 + | putative Rieske iron-sulfur protein TERM 1264 2431162 - 2431180 + G 73 -3.8 -4.67353 | overlap 2431153 GGTCCTGCTGATCAC CGGCGT GTATTTG ACGCTG TTTTTCGATCCGTCC qcrB 2430980 - 2432629 + | putative ubiquinol-cytochrome c reductase TERM 1265 2432730 - 2432686 - T 91 -19.1 -2.99596 | overlap 2432668 2432681 2432725 GGCAAATCAAGCACA GCCCGGCGACGACCCGGGTCG GCA CGACCCGGGAAGGAACCGGGC AAATCAAGCACAGCC TERM 1266 2432787 - 2432743 - T 91 -19.1 -2.99596 | overlap 2432725 2432738 2432782 GGCAAATCAAGCACA GCCCGGCGACGACCCGGGTCG GCA CGACCCGGGAAGGAACCGGGC AAATCAAGCACAGCC TERM 1267 2432844 - 2432800 - T 91 -19.1 -2.99596 | overlap 2432782 2432795 2432839 GGCAAATCAAGCACA GCCCGGCGACGACCCGGGTCG GCA CGACCCGGGAAGGAACCGGGC AAATCAAGCACAGCC TERM 1268 2432901 - 2432857 - T 91 -19.1 -2.99596 | overlap 2432839 2432852 2432896 GGCAAATCAAGCACA GCCCGGCGACGACCCGGGTCG GCA CGACCCGGGAAGGAACCGGGC AAATCAAGCACAGCC JTY_2207 2433564 - 2432920 - | putative transmembrane protein mmpS3 2434463 - 2433564 - | hypothetical protein TERM 1269 2433858 - 2433904 + g 93 -18.6 -3.30124 | overlap 2433856 2433858 2433861 CGTGGTGGTCGTGGG CGGCGGTGCCGCCGCCGTTG TGGTGGT CGCCGGCGGCGGCGCCGTGG TTGTCGCCGGTGGGG TERM 1270 2433858 - 2433874 + g 70 -11.5 -3.44051 | overlap 2433856 2433858 2433861 CGTGGTGGTCGTGGG CGGCGGT GCC GCCGCCG TTGTGGTGGTCGCCG TERM 1271 2433861 - 2433901 + g 100 -21.1 -2.8294 | overlap 2433856 2433858 2433858 GGTGGTCGTGGGCGG CGGTGCCGCCGCCGTTG TGGTGGT CGCCGGCGGCGGCGCCG TGGTTGTCGCCGGTG JTY_2209 2435068 - 2434649 - | putative transmembrane protein ctaC 2436167 - 2435076 - | putative transmembrane cytochrome c oxidase subunit II TERM 1272 2437235 - 2437258 + G 93 -16 -4.03413 | opp_overlap 2437233 GTGGCCAAGCATATG CGCGCCGATG TCAC CGTCGGCGCG TTTCTGTCCGGGGGT TERM 1273 2438249 - 2438290 + G 77 -10.1 -4.0162 | gap 1, overlap 2438250 2438251 2438253 GACGAGCACCGGTGC GG-CAGCAGCGACCACAGCC GCC GGCTGTGGACCATGCTGATC TTTATGCTGTGGCAC TERM 1274 2438250 - 2438288 + G 72 -11.6 -3.60104 | overlap 2438249 2438251 2438253 ACGAGCACCGGTGCG GCAGCAGCGACCACAGCC GCC GGCTGTGGACCATGCTGA TCTTTATGCTGTGGC TERM 1275 2438251 - 2438287 + G 72 -15.1 -2.7558 | overlap 2438250 2438249 2438253 CGAGCACCGGTGCGG CAGCAGCGACCACAGCC GCC GGCTGTGGACCATGCTG ATCTTTATGCTGTGG asnB 2436413 - 2438371 + | putative asparagine synthetase TERM 1276 2438432 - 2438391 - T 100 -21.7 -2.78384 | gap 1, opp_overlap 2438391 CCCTTCGCGAGCAGA CGCGGAATCGCATCG-GCGG GGC CCACACGGTGCGATTCCGCG TCTGCTCGGCGGTGC TERM 1277 2438391 - 2438432 + T 100 -21.7 -2.78816 | gap 1, opp_overlap 2438391 CCCTTCGCGAGCAGA CGCGGAATCGCATCG-GCGG GGC CCACACGGTGCGATTCCGCG TCTGCTCGGCGGTGC adoK 2439443 - 2438469 - | adenosine kinase TERM 1278 2439157 - 2439141 - G 73 -10.8 -3.70902 | GGTGGTACAGGTAAA CCGCGC CGTGT GCGCGG TCTCGGAGATCAGAA JTY_2213 2439647 - 2440339 + | hypothetical protein JTY_2214 2440703 - 2440347 - | hypothetical protein JTY_2215 2441879 - 2440803 - | hypothetical protein TERM 1279 2442190 - 2442174 - g 73 -15.1 -2.90496 | overlap 2442171 GCGGGTCGCAAACCA CCGGCCC CAA GGGCCGG CCCACGCCCAAGCGC JTY_2216 2442038 - 2442748 + | putative transmembrane protein TERM 1280 2443803 - 2443820 + G 71 -14.1 -2.80816 | CGTTGATGGTGTTGC GCGCCGC GGTC GCGGCGC TGTCGTCGATGGCGA cobT 2442827 - 2443912 + | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase cobS 2443909 - 2444658 + | cobalamin synthase ilvE 2447386 - 2446280 - | branched-chain amino acid transaminase JTY_2219 2444816 - 2446354 + | putative integral membrane protein TERM 1281 2446475 - 2446486 + gT 76 -7.2 -4.31433 | overlap 2446474 2446473 CACCTCGGTGATCTC GCCG GCGG CGGC TTTCTTCTGCCACTC gcvT 2448597 - 2447458 - | glycine cleavage system aminomethyltransferase T TERM 1282 2447715 - 2447727 + g 74 -10.5 -3.85698 | opp_overlap 2447678 CCCGCAGCAGCCGCC GCGGC CCG GCCGC TTTCTCGGCCAACAA JTY_2222 2448606 - 2449742 + | hypothetical protein TERM 1283 2450578 - 2450563 - g 70 -6.1 -4.16921 | opp_overlap 2450563, overlap 2450564 CAAGAACCCCCAAAA GGCCA AGAAGG TGGCC TTGGTTGGCAAGGGG TERM 1284 2451248 - 2451205 - g 78 -14.6 -3.28712 | gap 1 CGGCCCGGCCTACAA CACCGGCAGCGCC-TGGGG TTACACG CCCAAGGGCGCCACCGGTG TGCCCACCCGCACCA pepB 2449754 - 2451301 + | leucyl aminopeptidase ephD 2453117 - 2451339 - | short-chain dehydrogenase TERM 1285 2452125 - 2452089 - G 81 -12.2 -3.78953 | gap 1 ACCCTCACGAGCAAA GGCGAGC-GCGGTCTCG CGGC CGATTCCGCTGCCCGCC CCGGTAACCGACACC TERM 1286 2454284 - 2454232 - g 74 -7.5 -4.25256 | gap 2, overlap 2454229 2454242 2454245 GGCTGAGCAAAAGAA GCGGGCGAAAGCACCGGCGCCGGCC GCCCA GGCCGCCGCC-GCGCCGGC-CCCGA AAGCGCCGCCTGCCC TERM 1287 2454275 - 2454242 - g 78 -13.8 -3.56366 | gap 1, overlap 2454229 2454232 2454245 AAGAAGCGGGCGAAA GCACCGGCGCCGGCC GCCCA GGCCGCCGCC-GCGC CGGCCCCGAAAGCGC dlaT 2453381 - 2455042 + | dihydrolipoamide acyltransferase TERM 1288 2455794 - 2455812 + G 71 -9.5 -3.794 | overlap 2455789 GCTGATGTTGCCTAG CGTCGCG GTACG CGCGGCG TTTGGTGAGTTCGCC JTY_2226 2455042 - 2455947 + | hypothetical protein lipB 2456000 - 2456692 + | lipoyltransferase lipA 2456689 - 2457624 + | lipoyl synthase TERM 1289 2458158 - 2458148 - g 88 -8.2 -4.91109 | overlap 2458149 GGCTCAGGAGAAAAA GCGC ACC GCGC GACTGGTCGGGGACG JTY_2229 2457651 - 2458403 + | putative transmembrane protein JTY_2230 2458832 - 2458410 - | hypothetical protein TERM 1290 2459057 - 2459042 - g 72 -6.8 -4.18018 | TTCTGTGACGGAAAA GACGCC CGAC GACGTC TTCAAACTTGCCAAG glnA1 2459031 - 2460467 + | glutamine synthetase TERM 1291 2460622 - 2460666 + T 73 -10.7 -3.59979 | opp_overlap 2460627, overlap 2460624 2460627 GTTTCAGCCGGGTGC CACAACCCGCTTGGCAATC ATCTCCC GACCGCCGAGCGGGTTGTC TTTCACATGCGCCGA TERM 1292 2460624 - 2460664 + T 74 -13.3 -3.38046 | opp_overlap 2460627, overlap 2460622 2460627 TTCAGCCGGGTGCCA CAACCCGCTTGGCAATC ATCTCCC GACCGCCGAGCGGGTTG TCTTTCACATGCGCC TERM 1293 2460627 - 2460661 + T 74 -9.2 -3.82946 | opp_overlap 2460627, overlap 2460624 2460622 AGCCGGGTGCCACAA CCCGCTTGGCAATC ATCTCCC GACCGCCGAGCGGG TTGTCTTTCACATGC TERM 1294 2460661 - 2460627 - T 72 -12.1 -3.28791 | opp_overlap 2460624 2460622 2460627 AGCCGGGTGCCACAA CCCGCTTGGCAATCA TCTCC CGACCGCCGAGCGGG TTGTCTTTCACATGC glnE 2463769 - 2460785 - | glutamate-ammonia-ligase adenylyltransferase TERM 1295 2463008 - 2462996 - G 78 -6.2 -4.59773 | GTCCACCTCGAAAAA GGCC GCCGA GGCC ACCCGCATCATCTCG glnA2 2465158 - 2463818 - | putative glutamine synthetase TERM 1296 2463963 - 2463913 - G 82 -4.5 -4.93595 | overlap 2463914 AGAAAAAGTCAAAAA CGTGCTCCCCCAAGGCCTCCG CGACGAGTT CGGAGGCCTCCATGGCGCGCA GCGCACTATCCAAAC JTY_2234 2466815 - 2465253 - | putative exported protease JTY_2235 2468439 - 2466877 - | putative exported protease panB 2469158 - 2470003 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase JTY_2237 2470248 - 2471789 + | hypothetical protein TERM 1297 2471956 - 2471976 + F 88 -14.7 -3.69338 | overlap 2471951 2471950 2471973 CTCAAGCGCCTGCGC GGCCGCACT TTC GGTGCGGCC TTCTTGGCCTTGCTT JTY_2238 2472347 - 2472667 + | hypothetical protein JTY_2239 2472675 - 2473049 + | hypothetical protein JTY_2240 2474155 - 2473061 - | hypothetical protein JTY_2241 2474889 - 2474152 - | hypothetical protein JTY_2242 2476025 - 2474886 - | hypothetical protein cobC 2477116 - 2476022 - | hypothetical protein JTY_2244 2477695 - 2478570 + | hypothetical protein ptpA 2478563 - 2479054 + | phosphotyrosine protein phosphatase JTY_2246 2479054 - 2479869 + | putative transmembrane protein cobD 2480792 - 2479851 - | cobalamin biosynthesis protein JTY_2248 2480906 - 2481673 + | hypothetical protein ahpE 2482593 - 2482132 - | peroxiredoxin JTY_2250 2483069 - 2482593 - | hypothetical protein JTY_2251 2483904 - 2483107 - | hypothetical protein aceE 2483956 - 2486661 + | pyruvate dehydrogenase subunit E1 JTY_2253 2486721 - 2487965 + | hypothetical protein fabD 2488204 - 2489112 + | malonyl CoA-acyl carrier protein transacylase acpP 2489188 - 2489535 + | acyl carrier protein TERM 1298 2490006 - 2490043 + G 72 -13.3 -3.15544 | overlap 2490008 ATCGGTCTGCAGCTT GGGGCCCGCGCCGGGGT GATG ACCCCGGTGTCGGCCTG TTCGTCGGGCTCGGA TERM 1299 2490008 - 2490041 + G 86 -18.1 -3.14051 | overlap 2490006 CGGTCTGCAGCTTGG GGCCCGCGCCGGGGT GATG ACCCCGGTGTCGGCC TGTTCGTCGGGCTCG kasA 2489532 - 2490782 + | 3-oxoacyl-(acyl-carrier protein) synthase II kasB 2490813 - 2492129 + | 3-oxoacyl-(acyl-carrier protein) synthase II accD6 2492160 - 2493581 + | acetyl/propionyl-CoA carboxylase subunit beta JTY_2259 2493689 - 2494093 + | hypothetical protein JTY_2260 2493801 - 2494505 + | hypothetical protein TERM 1300 2494562 - 2494521 - T 100 -34.7 -2.78384 | opp_overlap 2494521 CCGCTGGTGAGCAGA CGCAGAGTCGCACTGCGCC GGCC GGCGCAGTGCGACTCTGCG TCTGCTCGCGCTCAA TERM 1301 2494521 - 2494562 + T 100 -34.7 -2.79183 | opp_overlap 2494521 CCGCTGGTGAGCAGA CGCAGAGTCGCACTGCGCC GGCC GGCGCAGTGCGACTCTGCG TCTGCTCGCGCTCAA glpD1 2496124 - 2494574 - | putative glycerol-3-phosphate dehydrogenase TERM 1302 2495028 - 2495014 - G 70 -2.1 -4.66163 | gap 1, overlap 2495016 ACGGCGATTCAAAAA CAGCGT GGTC ACGC-G AAACGTCGGCGGTGC JTY_2262 2496687 - 2496118 - | putative transcriptional regulatory protein JTY_2263 2496735 - 2498324 + | putative flavoprotein JTY_2264 2498321 - 2499250 + | diacylglycerol kinase TERM 1303 2499588 - 2499576 - g 83 -2.6 -5.14563 | TCCGCCACCAAAAAA CGAG TTCAT CCCG CGGCCAATCGAATAC JTY_2265 2499316 - 2499819 + | putative secreted unknown protein JTY_2266 2500307 - 2499852 - | putative integral membrane protein TERM 1304 2500138 - 2500148 + g 84 -6.8 -4.82901 | opp_overlap 2500136 2500138 AACGCAAACCGAACA CAGC CCA GCTG TTTTTGTGGGGCCGG JTY_2267 2500506 - 2500312 - | hypothetical protein JTY_2268 2501206 - 2500673 - | hypothetical protein JTY_2269 2502154 - 2501336 - | hypothetical protein JTY_2270 2503229 - 2502168 - | putative transcriptional regulatory protein adhE2 2503471 - 2504556 + | putative zinc-dependent alcohol dehydrogenase JTY_2272 2504556 - 2505191 + | hypothetical protein JTY_2273 2506776 - 2505268 - | hypothetical protein JTY_2274 2506865 - 2507818 + | short chain dehydrogenase JTY_2275 2509574 - 2507796 - | hypothetical proline rich protein TERM 1305 2509449 - 2509484 + g 79 -13.2 -3.727 | CGATGGCACACCGAC CTCGGGCGGGCGCTGT CGAT ACAGCGTCAGCACGGG TTTACGTGTGATGGA JTY_2276 2509924 - 2511153 + | putative transmembrane protein cyp124 2511328 - 2512614 + | putative cytochrome P450 124 TERM 1306 2512712 - 2512739 + T 79 -9 -4.18197 | overlap 2512714 CCACCCACTGGCGGA CCGGTAGGCACC GATC GGTGCCGGCCTG TTTTGGGTAGCGGAT TERM 1307 2512714 - 2512737 + T 74 -10.2 -3.69216 | overlap 2512712 ACCCACTGGCGGACC GGTAGGCACC GATC GGTGCCGGCC TGTTTTGGGTAGCGG TERM 1308 2512876 - 2512858 - T 78 -11.7 -3.70902 | CGGTCGAGAGCCAAA GGCGGCT TGATC AGCCGCC AACCGCAGGCCGAAG JTY_2278 2514034 - 2512868 - | hypothetical protein cyp128 2515500 - 2514031 - | putative cytochrome P450 128 JTY_2280 2515845 - 2515513 - | hypothetical protein lppN 2515922 - 2516449 + | putative lipoprotein TERM 1309 2516431 - 2516461 + F 91 -16.8 -3.65522 | overlap 2516458 CGGTCAGTTGCTCAC CGGGTCGGCCCGTC GCT GACCGGACGACCCG TTGTTCGGGTGCGTG JTY_2282 2516556 - 2516855 + | hypothetical protein TERM 1310 2516997 - 2516978 - g 70 -10 -3.68351 | GGCTGATGACTCAAA CGACACCG CGAC CGATGTCG AACCCGACTACCGGT JTY_2283 2516961 - 2517329 + | hypothetical protein JTY_2284 2517326 - 2517655 + | putative transmembrane protein TERM 1311 2517712 - 2517667 - T 100 -27.1 -3.02144 | gap 1, opp_overlap 2517669 2517676, overlap 2517669 2517676 CTAGCGCGGCGAACA GACGCAAAAGCCCCCG-CACGC ACG GAGTGTCGGGGGCTTTTGCGTC TACTCGCCAAATGCG TERM 1312 2517669 - 2517710 + T 100 -23.9 -2.78596 | gap 1, opp_overlap 2517669 2517667 2517676, overlap 2517676 AGCGCGGCGAACAGA CGCAAAAGCCCCCG-CACGC ACG GAGTGTCGGGGGCTTTTGCG TCTACTCGCCAAATG TERM 1313 2517710 - 2517669 - T 100 -23.9 -3.06815 | gap 1, opp_overlap 2517669 2517676, overlap 2517667 2517676 AGCGCGGCGAACAGA CGCAAAAGCCCCCG-CACGC ACG GAGTGTCGGGGGCTTTTGCG TCTACTCGCCAAATG TERM 1314 2517703 - 2517676 - T 100 -13.4 -4.28375 | gap 1, opp_overlap 2517669 2517676, overlap 2517669 2517667 CGAACAGACGCAAAA GCCCCCG-CACGC ACG GAGTGTCGGGGGC TTTTGCGTCTACTCG TERM 1315 2517676 - 2517703 + T 100 -13.4 -4.24948 | gap 1, opp_overlap 2517676 2517669 2517667, overlap 2517669 CGAACAGACGCAAAA GCCCCCG-CACGC ACG GAGTGTCGGGGGC TTTTGCGTCTACTCG JTY_2285 2518029 - 2517712 - | hypothetical protein JTY_2286 2518107 - 2518976 + | hypothetical protein cyp121 2518973 - 2520163 + | cytochrome P450 121 TERM 1316 2520288 - 2520270 - T 72 -2.3 -4.67982 | overlap 2520273 TTCTACCGAATAAAA GTACGGG CCTCC CCCAAAC TCCGAAATCGTCAGT JTY_2288 2521247 - 2520348 - | putative glycerolphosphodiesterase TERM 1317 2521146 - 2521129 - G 83 -12.7 -4.07568 | overlap 2521112 GTGTTCTCGGGAAAA TCGCGCG TACC CGCGCGA TGCGCGACAATCATC JTY_2289 2521426 - 2522805 + | putative dehydrogenase TERM 1318 2522850 - 2522832 - f 70 -11.6 -3.14211 | overlap 2522818 2522816 AGCCGGCCGGACCAA GGCCGGTC ATC GGCCGGCC AACAGGCCTGCAAGT TERM 1319 2523822 - 2523798 - g 72 -5 -4.4388 | gap 2, overlap 2523800 ACAGAAATTAAGAAA GAGCGCATCGCA CAC CGCGA-GCGC-C ACAAGGCGGCGTTCG TERM 1320 2524144 - 2524157 + G 70 -2.3 -4.64861 | overlap 2524145 TGGTCGGTGCAGCGG TGTGG ATGG CCACC TTTATTTTCGCCAAG pitB 2523039 - 2524697 + | putative phosphate-transport permease TERM 1321 2524675 - 2524689 + T 89 -11.4 -4.36914 | CCTCGGTCGGTCTTG TCGCGC TAC GCGCGA TTTTCTGACGACGCC TERM 1322 2524748 - 2524775 + T 93 -19.2 -3.31792 | gap 1, opp_overlap 2524748 CGAGCAGTCGCTAAA GCCCCCGACACGC CGT GCGTG-CGGGGGC TTATGCGACTGCTCG TERM 1323 2524775 - 2524748 - T 100 -19.2 -3.56092 | gap 1, opp_overlap 2524748 CGAGCAGTCGCTAAA GCCCCCGACACGC CGT GCGTG-CGGGGGC TTATGCGACTGCTCG JTY_2291 2525742 - 2524804 - | putative transcription regulator JTY_2292 2525807 - 2526001 + | hypothetical protein lipM 2526011 - 2527306 + | putative esterase JTY_2294 2527339 - 2528676 + | hypothetical protein JTY_2295 2529006 - 2528743 - | hypothetical protein JTY_2296 2529435 - 2529034 - | hypothetical protein TERM 1324 2530828 - 2530794 - g 73 -15.7 -2.52464 | TGCTGGTCCAAGGGA CTTCCTTGCCCACCG TCGTT CGGTGGGCGAGGATG CCCGAAGACGTCGCG yjcE 2529569 - 2531197 + | putative integral membrane transport protein JTY_2298 2531194 - 2531571 + | hypothetical protein cdh 2531541 - 2532323 + | CDP-diacylglycerol pyrophosphatase lppOa 2532465 - 2532620 + | putative lipoprotein lppOb 2532614 - 2532979 + | putative lipoprotein sseB 2533039 - 2533893 + | putative thiosulfate sulfurtransferase JTY_2303 2534898 - 2533894 - | hypothetical protein JTY_2304 2535193 - 2536416 + | putative aminotransferase TERM 1325 2536524 - 2536500 - f 75 -13.6 -3.05816 | gap 1, opp_overlap 2536500 TCAGTGCCCAGCCAA TGCGGCCGACC CCGC GG-CGGCCGCA TTCGGTAGACAAAGG TERM 1326 2536500 - 2536524 + F 75 -13.6 -3.05384 | gap 1, opp_overlap 2536500 TCAGTGCCCAGCCAA TGCGGCCGACC CCGC GG-CGGCCGCA TTCGGTAGACAAAGG JTY_2305 2536639 - 2537277 + | hypothetical protein JTY_2306 2537371 - 2538273 + | haloalkane dehalogenase JTY_2307 2538305 - 2538757 + | hypothetical protein TERM 1327 2539848 - 2539864 + G 81 -15.1 -3.53091 | overlap 2539842 2539857 GCTCACCGACGCCGC CCGGGCG TTT CGCCCGG TTTCCACCGGCCGCT JTY_2308 2538949 - 2539920 + | hypothetical protein htpG 2541869 - 2539926 - | heat shock protein 90 JTY_2310 2542875 - 2541943 - | hypothetical protein cut2 2542882 - 2543574 + | putative cutinase TERM 1328 2543899 - 2543886 - g 75 -9.5 -4.11216 | overlap 2543887 CGCGGAGGCCGAAAA GCGCG CTGC CGCGC GGGCCGGGCACGCGG JTY_2312 2543680 - 2543922 + | hypothetical protein JTY_2313 2544886 - 2543963 - | putative antibiotic-resistance protein JTY_2314 2545092 - 2544883 - | hypothetical protein TERM 1329 2546245 - 2546231 - g 75 -9.2 -4.07568 | CGCGGCCTGGCAAAA CCGGCC ATC GACCGG AAGCGGACCACCCGG JTY_2315 2545676 - 2546965 + | hypothetical protein JTY_2316 2546975 - 2547568 + | hypothetical protein JTY_2318 2548563 - 2547718 - | hypothetical protein JTY_2317 2547355 - 2547789 + | hypothetical protein TERM 1330 2548606 - 2548594 - TR 70 -10.5 -3.6682 | TGCGACGCATCGAAA GCGGG GTC CCCGC GACCAGTGGATTACC TERM 1331 2548834 - 2548806 - TR 79 -11 -3.85817 | gap 1, overlap 2548807 ACCCGTCCCTACAAA TTGCGGTGGCGCC GGGT GGCGCCCCCG-AA CCTGGCGGCACTTGC TERM 1332 2548834 - 2548807 - TR 70 -12.6 -2.91276 | overlap 2548806 CCCGTCCCTACAAAT TGCGGTGGCGCC GGGT GGCGCCCCCGAA CCTGGCGGCACTTGC JTY_2319 2549286 - 2549095 - | hypothetical glycine rich protein JTY_2320 2549802 - 2549371 - | hypothetical glycine rich protein JTY_2321 2550077 - 2549895 - | hypothetical protein JTY_2322 2550286 - 2551002 + | hypothetical protein JTY_2323 2552165 - 2551710 - | putative integrase JTY_2324 2552912 - 2553199 + | hypothetical protein JTY_2325 2553302 - 2553646 + | putative excisionase TERM 1333 2553670 - 2553700 + F 73 -6.9 -4.30911 | opp_overlap 2553652 CTGCATGCTCGACAC GTCGCTGCTG-TGGT CAA GCCGGCAGC-GCGAC TTTCTGTTGTCGTTG JTY_2326 2553751 - 2554275 + | hypothetical protein JTY_2327 2554353 - 2554622 + | hypothetical protein JTY_2328 2555773 - 2554919 - | hypothetical protein JTY_2329 2557157 - 2555784 - | hypothetical protein TERM 1334 2555885 - 2555932 + g 81 -12 -3.90112 | gap 1, overlap 2555876 CGCGCGGCAGTGTCG GCTCGCTGACACCTGCTTCGGTG GCC CGTCGCAGCAGGTC-CAGTGGGC TTTCGTTAAACCGGA TERM 1335 2556811 - 2556785 - G 85 -13.6 -4.10657 | CGATACCGGTGAAAA CCCCTGCCCCGG TGC CCGGAACCGGGG CATCCCAGTCGTCGG JTY_2330 2558671 - 2557154 - | hypothetical protein TERM 1336 2557235 - 2557205 - G 70 -11.1 -3.61715 | gap 1, opp_overlap 2557228, overlap 2557206 GACGCCCCGGAACAA CGCCGACGGACAGC CATG GCTGACCG-CGGCA ACCTGGCCGGGCTGG TERM 1337 2558752 - 2558779 + G 77 -9.8 -3.99374 | gap 1, overlap 2558762 GGCATATGCCCTGCT GGCGCCCA-GCCT GGT GGGCGTGGTCGCC TTCTTGTTGCTGCCC uspA 2558705 - 2559577 + | putative sugar-transport integral membrane protein ABC transporter uspB 2559564 - 2560388 + | putative sugar-transport integral membrane protein ABC transporter uspC 2560385 - 2561707 + | putative periplasmic sugar-binding lipoprotein JTY_2334 2562593 - 2561715 - | hypothetical protein rocE 2564020 - 2562590 - | putative cationic amino acid transport integral membrane protein rocD2 2564566 - 2564021 - | putative ornithine aminotransferase rocD1 2565231 - 2564566 - | putative ornithine aminotransferase JTY_2338 2566136 - 2565228 - | hypothetical protein JTY_2339 2566201 - 2566647 + | putative transcriptional regulatory protein TERM 1338 2566707 - 2566671 - T 81 -8 -4.42788 | gap 1, overlap 2566673 GCCAATGCTAGAAAA GGCCTGCTGA-GCTACG TAGA CGCAGCATGAGCAGGTC CTCGCGCCGCCAACC TERM 1339 2566755 - 2566730 - T 77 -12.5 -3.57561 | opp_overlap 2566723 CGCCAACCCGCGAAA CGGCGCGTCTG TACA CCGACACGCCG TTAGGGCGCGCGCCC JTY_2340 2567724 - 2566876 - | hypothetical protein JTY_2341 2569814 - 2567721 - | putative transmembrane ATP-binding protein ABC transporter JTY_2342 2569855 - 2570346 + | hypothetical protein PE23 2570598 - 2571746 + | PE family protein narK1 2573328 - 2571781 - | putative nitrite extrusion protein 1 TERM 1340 2572982 - 2572967 - G 78 -6.1 -4.58663 | ACGATTGCCGAAAAA GTCGC CCAGTT GCGAC CGCCAAAGATCGCGC TERM 1341 2573548 - 2573537 - R 72 -2.2 -4.71426 | overlap 2573509 CTCGCAGCAAGAAAA CAGC GAAA GCTA TTGTGCTCGAGTACT lppP 2574089 - 2573562 - | putative lipoprotein JTY_2346 2574164 - 2574550 + | hypothetical protein JTY_2347 2574607 - 2574945 + | hypothetical protein TERM 1342 2575493 - 2575535 + G 95 -19.9 -2.93382 | overlap 2575495 CAAATTGGCCCTCTA CACCGC-CGGCGGCGGCGTCG ATC CG-CGCCGCTGCCTCGCGGTG TCTCTGGATGTCGGC TERM 1343 2575495 - 2575533 + G 79 -16.7 -3.01912 | overlap 2575493 AATTGGCCCTCTACA CCGC-CGGCGGCGGCGTCG ATC CG-CGCCGCTGCCTCGCGG TGTCTCTGGATGTCG mez 2574975 - 2576621 + | putative [NAD] dependent malate oxidoreductase JTY_2349 2578189 - 2576618 - | putative integral membrane transport protein TERM 1344 2579251 - 2579291 + G 77 -10.3 -3.96148 | gap 1, opp_overlap 2579236 2579245 GGAACGCAAGCCGTC GGCCCGGT-TCGTGGCCG TAGAGC CGGCCGCGTCGCCGGTCC TTTCTGGTGGCCAGA cysK1 2578664 - 2579596 + | putative cysteine synthase A JTY_2351 2579600 - 2580289 + | putative serine acetyltransferase JTY_2352 2580705 - 2581673 + | hypothetical protein JTY_2353 2582855 - 2581737 - | hypothetical protein moeW 2583931 - 2582975 - | hypothetical protein TERM 1345 2585312 - 2585325 + G 72 -4.5 -4.48072 | GGATACCACGGAATG GTCGG CCTT TCGAC TTTTGTGGTCAATAT mmpL9a 2584562 - 2587042 + | putative transmembrane transport protein mmpL9b 2587055 - 2587450 + | putative transmembrane transport protein PE_PGRS39 2588777 - 2587536 - | PE-PGRS family protein TERM 1346 2588274 - 2588255 - G 82 -11.4 -4.05446 | gap 1 CGTGCGAAGCAGAAA CGCCGCTGC CGT GC-GCGGCG CCAGCCACTCCGGGG lppQ 2589466 - 2589885 + | putative lipoprotein lppQ JTY_2359 2590141 - 2590398 + | hypothetical protein dnaG 2592321 - 2590402 - | putative DNA primase dgt 2593621 - 2592326 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 1347 2592737 - 2592710 - G 70 -9.8 -3.64703 | CGCGGCCGATGCAAA GCGGCCCACCAG CTCG CTGGTCAACCGC TTGAGCGCGACCGAT JTY_2362 2593690 - 2595672 + | putative transmembrane protein TERM 1348 2595712 - 2595677 - T 100 -28.4 -2.52464 | GGCGGTTCTAAGCCA CGCGCCAGCGCACGGG GATA CCCGTACGCTGGCGCG TGTGGCCGTCGACCT esxO 2595939 - 2595757 - | putative EsaT-6 like protein 6 PPE71 2597329 - 2595923 - | PPE family protein TERM 1349 2596015 - 2596001 - G 71 -2.7 -4.58395 | GCCAGCGTCGAAAAA GCCTG TGTTG CCGGC GCCGGCGTTAGCGAG glyS 2598858 - 2597467 - | glycyl-tRNA synthetase JTY_2366 2599040 - 2599447 + | putative transcriptional regulatory protein furB 2599444 - 2599836 + | putative ferric uptake regulation protein JTY_2368 2600372 - 2599944 - | hypothetical protein JTY_2369 2601262 - 2600372 - | long (C50) chain z-isoprenyl diphosphate synthase recO 2602052 - 2601255 - | DNA repair protein amiA2 2602114 - 2603568 + | amidase era 2604467 - 2603565 - | GTP-binding protein JTY_2373 2604882 - 2604541 - | hypothetical protein JTY_2374 2606161 - 2604854 - | putative transmembrane protein TERM 1350 2605373 - 2605408 + gr 70 -9.8 -3.59979 | gap 1, overlap 2605354 2605375 2605377 GGTCGTTTCGCGGCC GCCGTTCGTCGAGCAGA ACG TCTGCTCGAC-AAGGTC TTTCAGGTACACCAC JTY_2375 2606706 - 2606158 - | hypothetical protein phoH1 2607768 - 2606710 - | putative phoH-like protein TERM 1351 2607618 - 2607643 + gr 71 -6.1 -4.25104 | overlap 2607576 CGTGCAGGTCGGCAC TCAGCGTGC GTTCGAGG GCACGCAGA TTTTCGTCGGCCGAA JTY_2377 2608042 - 2607740 - | hypothetical protein JTY_2378 2609352 - 2608039 - | hypothetical protein TERM 1352 2609012 - 2609026 + g 77 -7.8 -4.36914 | GCGATTTCGGTCCAT CGTTGC CAG GCGACG TTTTGTCCGACGCGG PE_PGRS40 2609547 - 2609732 + | PE-PGRS family protein JTY_2380 2610619 - 2609831 - | hypothetical protein dnaJ2 2611781 - 2610633 - | putative chaperone protein TERM 1353 2611696 - 2611718 + g 71 -9 -3.83502 | TCGGGATGCAGCTCG CGCGCCAGCT TGC GGTAGGCGCG TTTGATGTCCGCGTC hrcA 2612887 - 2611856 - | heat-inducible transcriptional repressor TERM 1354 2611974 - 2611950 - G 77 -16.5 -2.78384 | GTGGGGCCCACCACA CCCATACCGCC GTA GACGGTATGGG CGGTACCGTAGGCCG JTY_2383 2613059 - 2613376 + | hypothetical protein cfp2 2613909 - 2613403 - | low molecular weight antigen TERM 1355 2613557 - 2613525 - G 70 -10.3 -3.71378 | opp_overlap 2613523 2613525, overlap 2613504 2613526 GACCCGAGACGGAAA CGTCGGCGGTGGCCG AAC CGGCGGCCGCCGGCT GGATGTTCGTCACGC TERM 1356 2613556 - 2613526 - G 71 -13.8 -2.82505 | opp_overlap 2613523 2613525, overlap 2613504 2613525 ACCCGAGACGGAAAC GTCGGCGGTGGCCG AAC CGGCGGCCGCCGGC TGGATGTTCGTCACG mbtH 2614224 - 2614009 - | hypothetical protein mbtG 2615497 - 2614202 - | lysine-N-oxygenase mbtF 2619879 - 2615494 - | peptide synthetase mbtE 2624909 - 2619861 - | peptide synthetase mbtD 2628063 - 2625049 - | polyketide synthetase mbtC 2629397 - 2628063 - | polyketide synthetase TERM 1357 2628495 - 2628535 + g 72 -11.8 -3.57144 | gap 1, opp_overlap 2628500 CCCGACATCGGCGGG CACAACTGCTGCCTGCGCG ATGG CGCGCCGG-AGCAGTCGCG TTTGCGCGTCGCCGC TERM 1358 2628530 - 2628500 - G 73 -13.3 -3.28924 | gap 1, opp_overlap 2628495 CATCGGCGGGCACAA CTGCTGCCTGCGCG ATGG CGCGCCGG-AGCAG TCGCGTTTGCGCGTC TERM 1359 2628653 - 2628619 - G 75 -15.7 -2.78463 | gap 1, overlap 2628622 ACCTCGGCGAGGACA CGACGCCGGTCAGCGG TTGC CCGC-GACCGGCGCTG CAGGAGGAACATGGC TERM 1360 2628650 - 2628622 - G 85 -18.2 -2.66316 | gap 1, overlap 2628619 TCGGCGAGGACACGA CGCCGGTCAGCGG TTGC CCGC-GACCGGCG CTGCAGGAGGAACAT mbtB 2633631 - 2629387 - | phenyloxazoline synthase TERM 1361 2632638 - 2632594 - G 72 -12 -3.54741 | gap 1, overlap 2632555 2632556 2632595 CAGCACGTTGGCAAA GGCCGCGGCCAGCGTCATCGC CGGG GTGATGCCGCGGGCC-CGGGC TCGGGCGAACAACGC TERM 1362 2633755 - 2633786 + G 82 -12.4 -3.92522 | gap 1, opp_overlap 2633741 AGGCGGCAGATGGCC GCCGACCCAGTCC CGACGGC GGACTGGGT-GGC TTTGTACCGTTCCCC TERM 1363 2635225 - 2635213 - g 79 -3.3 -5.00884 | opp_overlap 2635214, overlap 2635214 ATCTGGGGGAAAAAA TCTGC GCT GCAGT CGTTTTCGCTGGAGC mbtA 2633730 - 2635427 + | salicyl-AMP ligase TERM 1364 2636001 - 2636047 + G 72 -7.1 -4.17762 | overlap 2636003 2636019 ATCTGACCGTCGACA TGCTGCTGCAACCCGAGGTCG CCGCC CGACCTCCGGCGGCGGTGGTG TTGTTTTCGCCGCTG mbtJ 2635523 - 2636443 + | putative acetyl hydrolase mbtI 2637799 - 2636447 - | salicylate synthase TERM 1365 2637898 - 2637884 - H 76 -5.7 -4.65916 | TCGACTGGAAGAAAA TGCTC GTCGG GAGCA AATGGCACCAGCCGG JTY_2395 2638559 - 2639812 + | hypothetical protein hemN 2640936 - 2639809 - | coproporphyrinogen III oxidase rpfD 2641506 - 2641042 - | putative resuscitation-promoting factor JTY_2398 2642060 - 2641503 - | hypothetical protein nirA 2642473 - 2644164 + | putative ferredoxin-dependant nitrite reductase cysH 2644161 - 2644925 + | phosphoadenosine phosphosulfate reductase JTY_2401 2644922 - 2645821 + | hypothetical protein ggtB 2645858 - 2647789 + | putative gamma-glutamyltranspeptidase precursor TERM 1366 2647849 - 2647860 + F 70 -7.2 -4.08164 | overlap 2647854 CCGATAATTTTGCCG GCCC TCTC GGGC TTTGTCTGCGGTTTT JTY_2403 2647920 - 2648360 + | putative integral membrane protein TERM 1367 2648503 - 2648549 + G 71 -13.7 -2.85813 | overlap 2648500 CGAGTAGGTTCCGGT GCGACGATGATCGGTGCCAGC TTGTC GCTGGCGTTGATCGGCGTCGG TCATCTTGTTGGCGT TERM 1368 2648703 - 2648742 + G 75 -12 -3.63991 | overlap 2648729 GACGGACGTGCGGTT CATCGGGGCGGGCGCCAT TGCG GTGGCGGCCGCCTGGACG TTCTTGAAGATCCTG JTY_2404 2648374 - 2649924 + | putative integral membrane protein PE_PGRS41 2650648 - 2651730 + | PE-PGRS family protein cysA1 2652810 - 2651755 - | putative sulfate-transport ATP-binding protein ABC transporter cysW 2653645 - 2652827 - | putative sulfate-transport integral membrane protein ABC transporter cysT 2654493 - 2653642 - | putative sulfate-transport integral membrane protein ABC transporter TERM 1369 2653910 - 2653891 - G 71 -9.2 -3.80733 | overlap 2653867 CGCACCGGATAACAA TGCCGGCG TCAG CGACGGCA ACACCACCGAAGTGA TERM 1370 2654468 - 2654442 - G 70 -10.7 -3.53012 | CCGCGGGGCCGGAAA GGCGCGCGCGG AACTG CGGCGCGCGGC GTTCGCCGACCAACG subI 2655560 - 2654490 - | putative sulfate-binding lipoprotein TERM 1371 2654642 - 2654626 - G 75 -9.3 -4.09511 | opp_overlap 2654641, overlap 2654627 AACAGGTCGGCAAAA TCGGCGG CGA CCGCCGG ATCGACCGGCCGGAA JTY_2410 2655574 - 2655903 + | hypothetical protein JTY_2411 2656091 - 2655888 - | hypothetical protein JTY_2412 2656375 - 2658303 + | hypothetical protein TERM 1372 2658324 - 2658365 + T 90 -19.7 -2.78384 | gap 1, opp_overlap 2658324 2658331, overlap 2658331 CCGATGCCGAGCAGA CGCAAAATCGCCCAAATTCG GGC CGAAAT-GGGCGATTTTGCG TCTGCTCGGCAAGCG TERM 1373 2658365 - 2658324 - T 90 -19.7 -2.79183 | gap 1, opp_overlap 2658324 2658331, overlap 2658331 CCGATGCCGAGCAGA CGCAAAATCGCCCAAATTCG GGC CGAAAT-GGGCGATTTTGCG TCTGCTCGGCAAGCG TERM 1374 2658331 - 2658358 + T 83 -9.2 -4.24948 | gap 1, opp_overlap 2658331 2658324, overlap 2658324 CGAGCAGACGCAAAA TCGCCCAAATTCG GGC CGAAAT-GGGCGA TTTTGCGTCTGCTCG TERM 1375 2658358 - 2658331 - T 83 -9.2 -4.24948 | gap 1, opp_overlap 2658324 2658331, overlap 2658324 CGAGCAGACGCAAAA TCGCCCAAATTCG GGC CGAAAT-GGGCGA TTTTGCGTCTGCTCG lppR 2659136 - 2658381 - | putative lipoprotein TERM 1376 2658644 - 2658664 + g 78 -14.7 -3.3334 | opp_overlap 2658642 AGCGTTGACCGAACG CGCTGGCGG GCA CCGTCAGCG TTGTGCCATCACATT TERM 1377 2658786 - 2658811 + g 75 -9 -4.13767 | gap 1, opp_overlap 2658782 2658781 CACCGAGGAACCGTC GTGTCGCCACG ACACC CG-GGCGACGC TTTTGACCTCGACGG lepA 2661094 - 2659133 - | GTP-binding protein JTY_2415 2661115 - 2661684 + | hypothetical protein JTY_2416 2662283 - 2661855 - | hypothetical protein JTY_2417 2662543 - 2663385 + | ribonuclease Z JTY_2419 2665294 - 2664455 - | hypothetical protein PE24 2663978 - 2664697 + | putative PE family-related protein JTY_2420 2666271 - 2665294 - | hypothetical protein JTY_2421 2667926 - 2666271 - | hypothetical protein TERM 1378 2668273 - 2668245 - g 79 -3.8 -4.87665 | gap 1, overlap 2668264 CGTGATCCACAAAAA CCAG-GCCGCC AACAAGAA GTCGGCACTGG CCCAGGCGCTCAACA rpsT 2668036 - 2668296 + | 30S ribosomal protein S20 JTY_2423 2669262 - 2668312 - | hypothetical protein JTY_2424 2670837 - 2669293 - | hypothetical protein TERM 1379 2670032 - 2670001 - G 73 -13.7 -3.19157 | gap 1, overlap 2669993 2670021 GACGAATGCCACCAA CGCG-ACGGCCGCG CACAC CACGGCCGCACGCG GTCCGATCAACCGTG JTY_2425 2671745 - 2670852 - | hypothetical protein JTY_2426 2673311 - 2672085 - | hypothetical protein JTY_2427 2674275 - 2673433 - | hypothetical protein JTY_2428 2675099 - 2674356 - | hypothetical protein JTY_2429 2675760 - 2675089 - | putative phosphoglycerate mutase JTY_2430 2676140 - 2675757 - | hypothetical protein nadD 2676772 - 2676137 - | nicotinic acid mononucleotide adenylyltransferase TERM 1380 2676332 - 2676370 + g 71 -12.4 -3.34013 | opp_overlap 2676332 CTCGACCAGAGTCAA CGCATCCTTGGCCAGCTG ACC CAGCAGGCTAGTGATGTG TTCGTTGCGCAACTC JTY_2432 2677047 - 2677319 + | hypothetical protein TERM 1381 2677890 - 2677839 - g 74 -12.4 -3.50393 | gap 2 CGTCATCTCATACAA CGCCC-CCAT-GGGCCCGACCTTG CACTAC CAAGTCCGAGCCCAATGGCGGACG GTGGCGCAGGAATAC TERM 1382 2678515 - 2678474 - g 70 -4.2 -4.49311 | opp_overlap 2678493, overlap 2678475 ACGACTACGAGAAAA CGCACCTGCCACCGGGCG CCTGGC CGCCCACCAGTTGGTACG CCGACTGGATCCGTG JTY_2433 2677561 - 2678607 + | hypothetical protein TERM 1383 2678647 - 2678620 - T 84 -11.2 -4.12188 | opp_overlap 2678613 2678624 TGAGCAGTCGCAAAA GCCCCCGAAACC GGTC GGATTTGGGGGC TGGTACGTGAATTAG JTY_2434 2679432 - 2678740 - | putative transposase TERM 1384 2678914 - 2678926 + g 73 -9.1 -3.9461 | CAGCTTGTGGGCGAC GGCGA TGA TCGCC TTCTTGTTGGCAGCG JTY_2435 2679739 - 2679446 - | putative transposase JTY_2436 2681270 - 2679828 - | hypothetical protein JTY_2437 2682145 - 2681270 - | hypothetical protein proA 2683419 - 2682172 - | gamma-glutamyl phosphate reductase TERM 1385 2683290 - 2683306 + g 70 -11.5 -3.36991 | overlap 2683289 GTAGCTCGTCGGCAG CCGCGTG CAG CGCGCGG TCTTTGACAGTCGTC TERM 1386 2683642 - 2683608 - H 100 -20.1 -4.01603 | GAGCTAAACACCAAA CCGATTCGTCGCGCC GGGCA GGGGCGACGAATCGG GCGAGTTCCAGCCGG ahpC 2684135 - 2684722 + | alkyl hydroperoxide reductase C protein ahpD 2684748 - 2685281 + | alkyl hydroperoxide reductase D protein PPE41 2685862 - 2685278 - | PPE family protein PE25 2686208 - 2685909 - | PE family protein TERM 1387 2686015 - 2685995 - G 73 -11.1 -3.64283 | CAAACTCCTCAAGAA CCACCGCCG CCG CAGCGATGG TCTGCCGATACTTCC JTY_2445 2686789 - 2686379 - | hypothetical protein JTY_2446 2687076 - 2686786 - | hypothetical protein JTY_2447 2688502 - 2687057 - | putative transmembrane protein JTY_2448 2690691 - 2688499 - | putative cyclase TERM 1388 2689907 - 2689923 + g 74 -12.3 -3.60296 | CAGGTAAAGTCGACG GCGTTGG CGC CCAACGC TTTAAGGTAGGCGTC rbsK 2691172 - 2692086 + | ribokinase TERM 1389 2692408 - 2692391 - g 71 -12.7 -3.28791 | opp_overlap 2692397 AGGTTGCCGGCATAA TCCCGGC GACG GCCGGGA TCGCGGCCACGGTTT JTY_2450 2692318 - 2692737 + | hypothetical protein nadE 2694773 - 2692734 - | NAD synthetase JTY_2452 2694651 - 2694929 + | hypothetical protein proB 2696189 - 2695059 - | gamma-glutamyl kinase TERM 1390 2695449 - 2695416 - G 70 -10.9 -3.53012 | overlap 2695396 2695418 GGGCCGGGCCGCAAA CACCGTGCCCACCGA CGCG TCGGCGAGCGCGGTC GCGGCGTCGGCCGCG TERM 1391 2695447 - 2695418 - G 73 -13.5 -3.34398 | overlap 2695396 2695416 GCCGGGCCGCAAACA CCGTGCCCACCGA CGCG TCGGCGAGCGCGG TCGCGGCGTCGGCCG obg 2697628 - 2696189 - | GTPase TERM 1392 2696702 - 2696678 - G 73 -12.1 -3.39327 | opp_overlap 2696680, overlap 2696639 GGTCGACACGCAGAA CACCGGCCAGC CGC GCTGGGCGATG TCGTCACGGACGAAC TERM 1393 2697373 - 2697395 + g 75 -11.9 -3.63515 | opp_overlap 2697373 2697372 CTTTCACTTCCAAAT CCGCGCCGG CGGCC CCGTCGCGG TTATTGCCCATCCCG rpmA 2697974 - 2697714 - | 50S ribosomal protein L27 rplU 2698303 - 2697989 - | 50S ribosomal protein L21 TERM 1394 2698551 - 2698514 - RH 100 -31.5 -3.86202 | CGCCAGCACACGAAA GTGCGCCGGTAGCGTCG ATCT CGACGCTACCGGCGCAC TCCGGGGCCCGGGTG rne 2702926 - 2700065 - | putative ribonuclease E dctA 2698651 - 2700126 + | putative C4-dicarboxylate-transport transmembrane protein TERM 1395 2702216 - 2702261 + gT 72 -5.4 -4.30576 | gap 3, opp_overlap 2702205, overlap 2702218 2702223 AGAAGCCGACTTACG CCGT-CGCCGGCGGCGCCGGCGA CGA TTGCCGGC-CT-CCAGCGAACCG TTTTCGTCCTCGCCG ndkA 2703666 - 2703256 - | nucleoside diphosphate kinase JTY_2460 2704080 - 2703709 - | putative integral membrane protein folC 2705540 - 2704077 - | putative folylpolyglutamate synthase protein TERM 1396 2704585 - 2704554 - G 70 -10.8 -3.54424 | gap 1 GGTGACGGCGGCAAA GCCGGCCCGGACGGC GTC GCCGTC-GAGCTGAC GCTGCGCACCGGCAC TERM 1397 2704628 - 2704608 - G 73 -3.9 -4.66163 | opp_overlap 2704626, overlap 2704609 2704610 ACCGGCACCGAAAAA GGCCTCG ACGGAAG CGAGGGC GAGCACCGCGTTGTG valS 2708167 - 2705537 - | valyl-tRNA synthase JTY_2463 2709514 - 2708255 - | hypothetical protein TERM 1398 2709546 - 2709591 + r 100 -32.3 -4.12188 | opp_overlap 2709548 2709555, overlap 2709555 CGGGGTGCGCGAGCA GACGCAAAAGCTCCCAAATCC GACC GGATTTGGGAGCTTTTGCGTC TTTTCGCGGTGGTCA TERM 1399 2709589 - 2709548 - R 100 -29.1 -2.78384 | opp_overlap 2709546 2709555, overlap 2709555 GGGTGCGCGAGCAGA CGCAAAAGCTCCCAAATCC GACC GGATTTGGGAGCTTTTGCG TCTTTTCGCGGTGGT rpfE 2710121 - 2709525 - | putative resuscitation-promoting factor TERM 1400 2709555 - 2709582 + g 100 -18.6 -4.35581 | opp_overlap 2709548 2709555, overlap 2709546 CGAGCAGACGCAAAA GCTCCCAAATCC GACC GGATTTGGGAGC TTTTGCGTCTTTTCG TERM 1401 2709582 - 2709555 - G 100 -18.6 -4.24948 | opp_overlap 2709555 2709546, overlap 2709548 CGAGCAGACGCAAAA GCTCCCAAATCC GACC GGATTTGGGAGC TTTTGCGTCTTTTCG JTY_2465 2710203 - 2710601 + | hypothetical proline and serine rich protein JTY_2466 2710935 - 2710789 - | hypothetical protein mobA 2711564 - 2710959 - | putative molybdopterin-guanine dinucleotide biosynthesis protein A TERM 1402 2711418 - 2711402 - G 83 -9.3 -4.30576 | CGGCCATCACGAAAA CCGGCGC GCA GCGCTGG CCGAGAATGCCGACC JTY_2468 2712687 - 2711566 - | 2-oxoglutarate ferredoxin oxidoreductase subunit beta JTY_2469 2714645 - 2712684 - | putative oxidoreductase subunit alpha JTY_2470 2716133 - 2714877 - | putative integral membrane transport protein clpX 2717429 - 2716149 - | ATP-dependent protease ATP-binding subunit mmuM 2717720 - 2718628 + | homocysteine methyltransferase TERM 1403 2718984 - 2719015 + G 73 -3.6 -4.66938 | gap 1, overlap 2718978 CTGATGAGTTGCGCC CTGC-TGGGCGATCG CTA CGGTCGCAGGCGCAG TTTTGTGTTCGGGGT JTY_2473 2718795 - 2720321 + | putative integral membrane transport protein clpP2 2721116 - 2720472 - | ATP-dependent Clp protease proteolytic subunit clpP 2721715 - 2721113 - | ATP-dependent Clp protease proteolytic subunit tig 2723232 - 2721832 - | trigger factor lipP 2723596 - 2724780 + | putative esterase/lipase JTY_2478 2725606 - 2724800 - | putative DNA glycosylase rpiB 2726100 - 2725612 - | ribose-5-phosphate isomerase JTY_2480 2726825 - 2726202 - | hypothetical protein TERM 1404 2728229 - 2728219 - g 72 -8.2 -4.07568 | overlap 2728220 GGCCGCGTTGGAAAA GGCC TCG GGCC GCGACCTGTCGAATT pepN 2726927 - 2729512 + | putative aminopeptidase N JTY_2482 2730088 - 2729585 - | hypothetical protein TERM 1405 2729715 - 2729670 - G 72 -13.2 -3.16742 | gap 1 TCGAACGCTGAGGAA GCGGCGGCAACCCCGAG-CGG AGCCG CCGACTCGGCACCGCGGCCGC GGACTTGCGAGCCGT JTY_2483 2730976 - 2730308 - | hypothetical protein glbO 2731119 - 2731505 + | putative globin TERM 1406 2732901 - 2732911 + G 87 -6.8 -5.09426 | opp_overlap 2732885, overlap 2732894 GCGCTGATGCCGGCT CGAC CTT GTCG TTTTTTCGACTTGCA aglA 2731505 - 2733145 + | putative alpha-glucosidase JTY_2486 2733213 - 2733506 + | hypothetical protein TERM 1407 2733911 - 2733901 - g 76 -2.4 -4.88918 | overlap 2733902 CGACGCGAAAGAAAA CGTC TGC GCCG CACACCGGATCGTGC JTY_2487 2733509 - 2734225 + | putative alanine and proline rich membrane protein JTY_2488 2734910 - 2734257 - | hypothetical protein JTY_2489 2735332 - 2734916 - | hypothetical protein gdh 2740200 - 2735329 - | putative NAD-dependent glutamate dehydrogenase JTY_2491 2741980 - 2740304 - | putative ABC transporter ATP-binding protein TERM 1408 2740341 - 2740373 + g 77 -10.6 -3.85864 | gap 1, opp_overlap 2740307 TGGGTGACCCTATGC GGTCGAGCGGCGTCG ACAC CGA-GCCGTTCCACC TTGTTCTCCTCGTAG TERM 1409 2740643 - 2740666 + g 82 -6.6 -4.77036 | opp_overlap 2740659, overlap 2740659 GAGCCTGTTGCGCTC CCCGCCGG ATAGCACA CCGGCCGG TTTTTGCTGGTCCGG TERM 1410 2740692 - 2740728 + g 77 -13.1 -3.53811 | gap 1, opp_overlap 2740692 2740691 TCCGGTCCCTTAAAC CCGAA-TGCCGACACG TAGGCC CGTGACGGCACTTCGG TTTGACCGACCTGGA TERM 1411 2741223 - 2741236 + g 83 -3.1 -5.252 | gap 1, overlap 2741206 2741224 2741231 TTGCGGCCTTGCACC G-CGAG CCG CTCGGC TTTTTTCTCCAGATA JTY_2492 2742546 - 2742061 - | hypothetical protein JTY_2493 2743478 - 2743155 - | hypothetical protein plsB2 2745863 - 2743494 - | putative glycerol-3-phosphate acyltransferase plsC 2747602 - 2745860 - | putative transmembrane phospholipid biosynthesis enzyme TERM 1412 2747292 - 2747318 + g 72 -11.5 -3.60805 | gap 1, opp_overlap 2747293, overlap 2747293 TCCAGGTCGGTCAAG AGCCGCC-CGGC CAGC GCCGCGGCGGCC TTTCCGATAAGGTCT TERM 1413 2747293 - 2747317 + g 72 -15 -2.76162 | gap 1, opp_overlap 2747293, overlap 2747292 CCAGGTCGGTCAAGA GCCGCC-CGGC CAGC GCCGCGGCGGC CTTTCCGATAAGGTC TERM 1414 2747317 - 2747293 - G 74 -15 -3.02144 | gap 1, opp_overlap 2747292 2747293 CCAGGTCGGTCAAGA GCCGCC-CGGC CAGC GCCGCGGCGGC CTTTCCGATAAGGTC TERM 1415 2747501 - 2747483 - G 75 -4.4 -4.59773 | overlap 2747484 2747487 GTCCAGGTCGAAAAA CGCACCGA CCT TCGGGCCG GCAGGACTGGCCAGA JTY_2496 2749074 - 2747599 - | hypothetical protein lipQ 2750568 - 2749303 - | putative carboxylesterase TERM 1416 2750615 - 2750633 + H 95 -10.2 -4.46155 | opp_overlap 2750616, overlap 2750616 GCATCGTTGCGGTAA ACGGCTGG TTG CCAGCCGG TTTTGTACGTGTGTC TERM 1417 2750616 - 2750632 + H 77 -13.7 -3.2697 | opp_overlap 2750616, overlap 2750615 CATCGTTGCGGTAAA CGGCTGG TTG CCAGCCG GTTTTGTACGTGTGT TERM 1418 2750632 - 2750616 - H 79 -13.7 -3.53224 | opp_overlap 2750616 2750615 CATCGTTGCGGTAAA CGGCTGG TTG CCAGCCG GTTTTGTACGTGTGT TERM 1419 2751384 - 2751337 - g 78 -9.8 -4.07568 | gap 1 CGCCCGCTTCCAAAA GCT-GGGACTGCATCCAGGTGGC GGC GCAACCTGGATGCTGCAGCGAGC GGTGGGTCCGCAGGT TERM 1420 2751397 - 2751412 + G 70 -8.2 -3.95324 | AGCGGTGGGTCCGCA GGTCGC CCGT GCGGCC TTATTGTTCGGCATG echA14 2750930 - 2751700 + | enoyl-CoA hydratase TERM 1421 2751763 - 2751785 + T 74 -14.8 -2.52623 | overlap 2751762 2751760 GCTGCTGCTTGACTC CGCGCGCTGG GCC CGAGCGCGCG CTGTTGTACGGCCCA TERM 1422 2751857 - 2751903 + T 81 -15.7 -3.05384 | gap 1 CCGGCCCCCGACTCC GGCAGGCCCGACGGCGCCCAGC GCTA GCCGGGCGC-GCCGGCCATGCC TTCGGTGCCGGAAAC PE_PGRS42ab 2753963 - 2752380 - | PE-PGRS family protein TERM 1423 2752572 - 2752537 - G 81 -11.6 -3.9461 | overlap 2752538 GTTGCCGAACAACAA CCCGCCGGCGCCGCCG TTGC CGCCCGCGCCGCCGGT CCCGCCGGCGCCGCC TERM 1424 2752571 - 2752538 - G 74 -15.1 -2.96444 | overlap 2752537 TTGCCGAACAACAAC CCGCCGGCGCCGCCG TTGC CGCCCGCGCCGCCGG TCCCGCCGGCGCCGC TERM 1425 2752903 - 2752870 - G 77 -12.4 -3.68351 | opp_overlap 2752870, overlap 2752871 CCGTTACCACCGAAA CCGCCGCTACCACC GGTAGA GGTGGCAGTGGCGA TGTGTACGAAAGCGC TERM 1426 2752902 - 2752871 - G 71 -13.7 -2.80796 | opp_overlap 2752870, overlap 2752870 CGTTACCACCGAAAC CGCCGCTACCACC GGTAGA GGTGGCAGTGGCG ATGTGTACGAAAGCG TERM 1427 2752930 - 2752915 - G 75 -11.8 -3.73775 | GCGATGTGTACGAAA GCGCCG CCTC CGGCGC CGCCGCTACCACCCC TERM 1428 2753943 - 2753920 - G 81 -12.4 -3.84451 | CTCGCTAAATCCAAA GCCGCAGTTG CCAG CAGCTGCGGC GTCGCGATCACCAAC JTY_2501 2757458 - 2754045 - | putative transcriptional regulatory protein TERM 1429 2756555 - 2756525 - GR 76 -8.1 -4.19238 | CCGGCAACCCCAAAA CCCGCGCCGCCGC GATCG GCACCAGCGCCGG GTCGGTGATCGGCGC JTY_2502 2757723 - 2757424 - | hypothetical alanine rich protein PE_PGRS43b 2761286 - 2757960 - | PE-PGRS family protein TERM 1430 2758463 - 2758491 + g 83 -15.3 -3.53012 | gap 1 GATTGCCGACCTCGC CGGCGGGTGCCG ACCCGC CGGC-CCCGCCG TTTCCGCCGGCGCCG PE_PGRS43a 2762805 - 2761378 - | PE-PGRS family protein TERM 1431 2761716 - 2761735 + g 70 -10.6 -3.53012 | ACCCGCCAGCACCCC CGGCGCCG CCCA CGCCGCCG TTTCCGCCGGCACCG TERM 1432 2762785 - 2762762 - G 73 -6.6 -4.34402 | CGCGCCAGATCAAAA GCCGCAGTTG CCAT CATCTCCGGC GTCGCGATCACATAT TERM 1433 2763474 - 2763503 + G 72 -11.5 -3.57263 | gap 1 TCGGACGCCGACGGC CTTGTCGT-CGGCG TCC TGCCGGGCGACAAG TTTACCGATGGCAAT JTY_2505 2763234 - 2763857 + | hypothetical protein JTY_2506 2763847 - 2764599 + | hypothetical protein JTY_2507 2764652 - 2764873 + | hypothetical protein JTY_2508 2764879 - 2765304 + | hypothetical protein pdhC 2766508 - 2765327 - | branched-chain alpha-keto acid dehydrogenase subunit E2 pdhB 2767551 - 2766505 - | putative pyruvate dehydrogenase E1 component subunit beta pdhA 2768665 - 2767562 - | putative pyruvate dehydrogenase E1 component subunit alpha citE 2769745 - 2768924 - | putative citrate (pro-3s)-lyase subunit beta JTY_2513 2770299 - 2769742 - | putative oxidase regulatory-related protein TERM 1434 2769853 - 2769863 + g 72 -8.2 -4.14511 | TGTGACGATGCCCTC GCCG GGC CGGC TTTTCGACTCACGTT fadE19 2771480 - 2770296 - | putative acyl-CoA dehydrogenase accA1 2773449 - 2771485 - | putative acetyl-/propionyl-coenzyme A carboxylase alpha chain subunit alpha TERM 1435 2772396 - 2772338 - G 76 -15.1 -3.19463 | gap 1, overlap 2772339 CCTAGCAGTGACGAA TCCACCCGCACCCCGGGGCCGGCGG-GT TCGA ACACCGCCAGCACCCGGCCGCCGGTGGG CAGGAATTCCCGCGC TERM 1436 2772395 - 2772339 - G 87 -18.6 -2.51464 | gap 1, overlap 2772338 CTAGCAGTGACGAAT CCACCCGCACCCCGGGGCCGGCGG-GT TCGA ACACCGCCAGCACCCGGCCGCCGGTGG GCAGGAATTCCCGCG TERM 1437 2772649 - 2772595 - G 72 -4.8 -4.47707 | overlap 2772597 2772621 CTCCATGAAAAAGAA CT-CGTCGGGGCGCTGCGCGGAGACG ATGAA CTCCACCGTGCCG-GCGCCGACGTAG TCCACGCAGCGGGCG accD1 2775043 - 2773454 - | putative acetyl-/propionyl-coa carboxylase subunit beta TERM 1438 2773896 - 2773935 + g 73 -14.2 -3.21276 | opp_overlap 2773929, overlap 2773894 2773897 CCATGCTTGGCGATT CCGCCGGCCTCGTAGTCG CGGC CGACCATGAAGCCGGCGA TGTTCTGCAGGAACA TERM 1439 2773897 - 2773934 + g 85 -17.7 -2.52623 | opp_overlap 2773929, overlap 2773896 2773894 CATGCTTGGCGATTC CGCCGGCCTCGTAGTCG CGGC CGACCATGAAGCCGGCG ATGTTCTGCAGGAAC TERM 1440 2774935 - 2774966 + g 84 -13.7 -3.99494 | GGCGTTTCCGGGCGC GTTCGTTGCCGCC CAGGGC GGCGGCGGCGAGC TTATTGTTCAATTCC scoB 2775696 - 2775040 - | putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit beta scoA 2776439 - 2775693 - | putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit alpha TERM 1441 2776160 - 2776194 + g 83 -14.2 -3.78934 | opp_overlap 2776179, overlap 2776161 2776163 GGGTCAGTTCCACCT CGAGCTCGCCCGCGAG GAA CTGGCGGGCGAACTCC TTGTTCTCCCCCACG TERM 1442 2776161 - 2776193 + g 86 -17.7 -2.87146 | opp_overlap 2776179, overlap 2776160 2776163 GGTCAGTTCCACCTC GAGCTCGCCCGCGAG GAA CTGGCGGGCGAACTC CTTGTTCTCCCCCAC TERM 1443 2776163 - 2776191 + g 74 -14.5 -2.98545 | opp_overlap 2776179, overlap 2776161 2776160 TCAGTTCCACCTCGA GCTCGCCCGCGAG GAA CTGGCGGGCGAAC TCCTTGTTCTCCCCC fadD35 2778165 - 2776522 - | acyl-CoA synthetase TERM 1444 2778885 - 2778847 - g 73 -13.1 -3.25942 | gap 1, overlap 2778834 2778833 AGCGGCCGACAGCAA GCCGGCACGGACGGTGCG TGCA CGCGCCGTCC-TACGGGC GATGACGGTCGCCGC JTY_2520 2778281 - 2778928 + | putative transcriptional regulatory protein JTY_2521 2779007 - 2779828 + | putative proline rich membrane protein JTY_2522 2781162 - 2779825 - | putative integral membrane leucine and alanine rich protein JTY_2523 2781247 - 2782053 + | putative short-chain type dehydrogenase/reductase JTY_2524 2783658 - 2782057 - | hypothetical protein orn 2783726 - 2784373 + | oligoribonuclease JTY_2526 2786372 - 2785125 - | transposase for insertion sequence element IS1081 JTY_2527 2786372 - 2786509 + | hypothetical protein TERM 1445 2787035 - 2786989 - g 70 -10.1 -3.65902 | gap 1, opp_overlap 2786993 TCTACGCCAGCCAAA TCGAGCCGAGAGTGGGCGACCC GGAA GGGCC-CACACTCCTGGCTGGA TTCGGCAATATCCCT JTY_2528 2786730 - 2787152 + | hypothetical protein JTY_2529 2787907 - 2787446 - | hypothetical protein JTY_2530 2789160 - 2787913 - | hypothetical protein JTY_2531 2790082 - 2789279 - | hypothetical protein JTY_2532 2790330 - 2790079 - | hypothetical protein lppS 2791904 - 2790678 - | putative lipoprotein TERM 1446 2791705 - 2791648 - G 72 -14.8 -2.78463 | gap 2 ACGGCCGCCAGCACA CCGTCGGCGGCGGTCACCGACACCGGTG CATC CAC-GGTGACGCCGACGG-CGCCGTCGG TGACCGACGCGGTGA TERM 1447 2792954 - 2792938 - g 75 -11.5 -3.62597 | GTTATGGGGCAACAA CGGCGCC GCT GGCACCG GCGACCCAGTTAACG PE26 2792354 - 2793832 + | PE family protein JTY_2535 2794184 - 2793957 - | hypothetical protein bcp 2794253 - 2794726 + | putative bacterioferritin comigratory protein JTY_2537 2796110 - 2794698 - | hypothetical protein acpS 2796499 - 2796107 - | 4'-phosphopantetheinyl transferase fas 2805901 - 2796692 - | putative fatty acid synthase TERM 1448 2797509 - 2797547 + g 95 -20.5 -2.70932 | gap 2, opp_overlap 2797501 2797504 2797532 GCCAACAGGATCGTC CCGCCGCC-T-TGGGCTTC GAC GAAGCCCAGACGGCGGCGG TCGTTGGGCCGGGAA TERM 1449 2799787 - 2799806 + g 75 -11.4 -3.65046 | GGGCGCTGGCCCAGC GGTCGTCG AATA CGACGGCC TTCTTGGGGTCGAAC TERM 1450 2802102 - 2802056 - G 86 -9.3 -4.60487 | opp_overlap 2802100, overlap 2802057 CACCATGCCCAAAAA CCGCGC-GGTCCAGCCGACCAGC CGG GCCGGT-GGCCGGGCCTGCCCGT CGGTGGCGGTCACCG TERM 1451 2802101 - 2802057 - G 73 -12.8 -3.3581 | opp_overlap 2802100, overlap 2802056 ACCATGCCCAAAAAC CGCGC-GGTCCAGCCGACCAGC CGG GCCGGT-GGCCGGGCCTGCCCG TCGGTGGCGGTCACC TERM 1452 2805573 - 2805547 - G 73 -13.6 -3.23853 | opp_overlap 2805553, overlap 2805545 TCTGGGTAAGCAACA CGCCGGGCACCG ACA CGGCGGCCGACG TCAGGTGCTTGTCGG TERM 1453 2806234 - 2806251 + r 72 -2 -4.78237 | gap 1, opp_overlap 2806234 GTGGAGTAGCTATAA CTGCGCT GATCA AG-GCAG TTTTGTTATCAAATC JTY_2540 2807143 - 2806421 - | hypothetical protein JTY_2541 2807660 - 2807887 + | hypothetical protein JTY_2542 2807884 - 2808285 + | hypothetical protein mrr 2809240 - 2808320 - | putative restriction system protein JTY_2544 2809444 - 2810835 + | hypothetical protein JTY_2545 2811255 - 2810836 - | hypothetical protein JTY_2546 2811476 - 2811252 - | hypothetical protein JTY_2547 2814350 - 2811507 - | putative amino acid decarboxylase JTY_2548 2814823 - 2814422 - | hypothetical protein nusB 2815293 - 2814823 - | transcription antitermination protein efp 2815859 - 2815296 - | elongation factor P pepQ 2816987 - 2815869 - | putative cytoplasmic peptidase TERM 1454 2816036 - 2816008 - G 76 -14.5 -3.18571 | opp_overlap 2816006, overlap 2816006 2816002 2816004 2816009 CCGGGTAAATAGACA CCGGGCTCCACGG TCA CCACGGAGCCCGC CAGTAGTGTACCGGC TERM 1455 2816035 - 2816009 - G 85 -18 -2.50821 | opp_overlap 2816006, overlap 2816008 2816006 2816002 2816004 CGGGTAAATAGACAC CGGGCTCCACGG TCA CCACGGAGCCCG CCAGTAGTGTACCGG TERM 1456 2817591 - 2817574 - g 77 -10.5 -3.92075 | AGCCTGAGGCACAAA CCGCGGC CGTC GCCACGG TCGAACGTGAGGCAC JTY_2552 2817021 - 2817713 + | putative transmembrane protein aroD 2818160 - 2817717 - | 3-dehydroquinate dehydratase aroB 2819245 - 2818157 - | 3-dehydroquinate synthase aroK 2819772 - 2819242 - | shikimate kinase aroF 2820981 - 2819776 - | chorismate synthase JTY_2557 2820996 - 2821403 + | hypothetical alanine rich protein TERM 1457 2821684 - 2821734 + F 70 -10.3 -3.61178 | opp_overlap 2821674, overlap 2821685 GAAGACCAGCTGGAG GCCAACC-GGCGGGCGGTGCTGGAC GCT GTC-AGCGACGCCCGCCGGGACGGG TTTGCCGTCGGTGAG TERM 1458 2821685 - 2821733 + F 72 -13.8 -2.76492 | opp_overlap 2821674, overlap 2821684 AAGACCAGCTGGAGG CCAACC-GGCGGGCGGTGCTGGAC GCT GTC-AGCGACGCCCGCCGGGACGG GTTTGCCGTCGGTGA TERM 1459 2822475 - 2822493 + G 71 -3.1 -4.59109 | gap 1, overlap 2822474 TCTCGCGCAGGCCGG CG-CTCCG AAGT TGGAGGCG TTTTTGCGGGATCTG JTY_2558 2821699 - 2822910 + | hypothetical protein lppA 2823037 - 2823696 + | putative lipoprotein lprR 2823693 - 2824352 + | putative lipoprotein lppB 2824349 - 2825011 + | putative lipoprotein JTY_2562 2825008 - 2825286 + | hypothetical protein JTY_2563 2825379 - 2825792 + | hypothetical protein JTY_2564 2825831 - 2826088 + | hypothetical protein JTY_2565 2826085 - 2826462 + | hypothetical protein JTY_2566 2827347 - 2826952 - | hypothetical protein JTY_2567 2827589 - 2827344 - | hypothetical protein JTY_2568 2828419 - 2828000 - | hypothetical protein aroE 2829213 - 2828431 - | shikimate 5-dehydrogenase JTY_2570 2830489 - 2829236 - | hypothetical protein TERM 1460 2830355 - 2830383 + g 100 -26.1 -4.17556 | opp_overlap 2830355 CAGGCTCAGGGCAAA TCCGCCGGCGACG CGC CGTCGCCGGCGGA TTTGTTGGGCGTGTC TERM 1461 2830383 - 2830355 - G 100 -26.1 -3.60296 | opp_overlap 2830355 CAGGCTCAGGGCAAA TCCGCCGGCGACG CGC CGTCGCCGGCGGA TTTGTTGGGCGTGTC JTY_2571 2830994 - 2830482 - | Holliday junction resolvase-like protein alaS 2833709 - 2830995 - | putative alanyl-tRNA synthetase JTY_2573 2834189 - 2833800 - | hypothetical protein JTY_2574 2834296 - 2834970 + | hypothetical protein TERM 1462 2835033 - 2834975 - f 76 -13.8 -3.14211 | opp_overlap 2834985 AGCTGGTCTGATCAA CCCGC-CGGCGGCAGTACCGGCCCGAGC CCGAC GCT-GGGCCGGCACTGCTGTCGTGCGTC GAGCGGCGCTCGCGG TERM 1463 2834985 - 2835022 + F 86 -17.8 -2.80816 | gap 1, opp_overlap 2834975 ATCAACCCGCCGGCG GCAGTACCGGCCCGAGC CCGAC GCT-GGGCCGGCACTGC TGTCGTGCGTCGAGC JTY_2575 2835055 - 2835765 + | hypothetical protein JTY_2576 2837153 - 2835795 - | recombination factor protein TERM 1464 2836068 - 2836083 + g 74 -10.4 -3.76952 | CATCGCCGCGGCCAA CGCCGT GGTG ACGGCG TTTGACTTCGGTGCG JTY_2577 2837299 - 2838276 + | proline and glycine rich transmembrane protein TERM 1465 2838581 - 2838539 - f 74 -9.9 -3.72893 | gap 1, opp_overlap 2838577, overlap 2838550 CAGGTGGTTAGCAAA TCGCCGACGA-ACACGACGC CACC GCGTCATGCGCCATCGCCGA CCCCGCCTTGGTGGC JTY_2578 2838633 - 2839370 + | hypothetical protein JTY_2579 2839513 - 2840562 + | putative glutamine-transport transmembrane protein ABC transporter glnQ 2840565 - 2841557 + | putative glutamine-transport ATP-binding protein ABC transporter TERM 1466 2843330 - 2843352 + G 83 -12.6 -4.07568 | GCCGCCAATCGTTAC GCCGCCCGGG CTC CTCCGGCGGC TTTTGACCGGCACGG JTY_2581 2841834 - 2843585 + | hypothetical protein TERM 1467 2844664 - 2844711 + G 73 -13.3 -3.28119 | gap 1 CAGCGCGTCGATGAG CGGCTGGCCGCCGCCGAC-GTC CGGCT GACCGTCGGCGGCGAACCGACG TTCGTGTCGGTGGAT JTY_2582 2843596 - 2845197 + | long hypothetical protein JTY_2583 2845223 - 2847016 + | long hypothetical protein JTY_2584 2847016 - 2849670 + | hypothetical alanine and leucine rich protein JTY_2585 2850692 - 2849667 - | hypothetical protein TERM 1468 2849876 - 2849860 - G 85 -10.1 -4.2717 | ATGATGGTATTAAAA GCGCTGG GGC CCAACGC CGGCCGGTCGAAGGT JTY_2586 2851629 - 2850685 - | hypothetical protein TERM 1469 2851271 - 2851310 + g 80 -17 -2.62184 | gap 1 GATCCGGGCAGCCCG GCGGGCCGG-GCCGCCTCC CAC GGTTGCAGCGCCGGCCCGC TGGTGTAAAGCCCGG JTY_2587 2851733 - 2852122 + | hypothetical protein JTY_2588 2853181 - 2852114 - | putative transmembrane alanine and valine and leucine rich protein aspS 2855023 - 2853188 - | aspartyl-tRNA synthetase TERM 1470 2853807 - 2853841 + g 70 -11.2 -3.53012 | opp_overlap 2853787 AGCCGGTTGGCGATC TCGACGCGGGCCGCGC CCA GCAGTGCCCGCGACGA TTTGACCGGACCGGC TERM 1471 2853901 - 2853929 + g 70 -3.6 -4.56597 | CCCCGACATGGTCGG CCAGTCCGGTGC GCTCG GCCTCGGTCAGG TTTTTGGCCACCGGA TERM 1472 2855707 - 2855727 + G 71 -12.5 -3.29263 | overlap 2855708 CGGTCGGCAATGTTC CGCCGCGAC GAC GTCGCGGCA TTGTCGCGCCGCTAT TERM 1473 2855708 - 2855726 + G 74 -16 -2.57344 | overlap 2855707 GGTCGGCAATGTTCC GCCGCGAC GAC GTCGCGGC ATTGTCGCGCCGCTA JTY_2590 2855263 - 2856003 + | 2-dehydropantoate 2-reductase TERM 1474 2856420 - 2856404 - g 71 -9.3 -3.87075 | opp_overlap 2856405 2856406 2856409, overlap 2856405 ACCATGGCGCAGAAA CTCGCCG GCC CGGCGCG GCCGGCGCTGTTCGT TERM 1475 2856455 - 2856469 + G 71 -9.2 -3.87373 | CGGCCCCTGCTGAAC CTGGCG CTG CGCCGG TTTCTAAGGAATCTG JTY_2591 2856026 - 2856529 + | hypothetical protein JTY_2592 2856559 - 2857440 + | putative membrane glycine rich protein JTY_2593 2857910 - 2857446 - | hypothetical protein TERM 1476 2859466 - 2859498 + G 70 -6.2 -4.25283 | gap 1, opp_overlap 2859486, overlap 2859467 GCTGCTCTTCCCGCA GCCTCGGTGCCAGGT GATA ACC-GGCGTCGGGGA TTTTGATCCCGCGAT JTY_2594 2858138 - 2859727 + | hypothetical protein JTY_2595 2860751 - 2859729 - | hypothetical protein dhaA 2860859 - 2861761 + | haloalkane dehalogenase hisS 2863312 - 2862041 - | histidyl-tRNA synthetase JTY_2598 2863983 - 2863309 - | putative glyoxalase II ppiB 2864034 - 2864960 + | putative peptidyl-prolyl cis-trans isomerase B relA 2867418 - 2865046 - | putative GTP pyrophosphokinase apt 2868120 - 2867449 - | adenine phosphoribosyltransferase JTY_2602 2869897 - 2868224 - | putative lipoprotein TERM 1477 2869021 - 2869049 + g 86 -16.7 -3.62224 | opp_overlap 2869017 ATCCCGATGAACCGG CCGCGACGTCGAC CAC GTCGACGCTGCGG TTGTTGACCCGGTCT TERM 1478 2869399 - 2869424 + g 75 -3.2 -4.82901 | gap 1, overlap 2869401 GGTCAACGACACTGC GATCCGGGATG AACGA CA-CCCGGGCC TTTTTCTGCCCCGCC secF 2871231 - 2869903 - | preprotein translocase subunit secD 2872956 - 2871235 - | preprotein translocase subunit yajC 2873413 - 2873066 - | preprotein translocase subunit gabT 2873580 - 2874929 + | 4-aminobutyrate aminotransferase TERM 1479 2875804 - 2875754 - g 73 -13.9 -3.09933 | gap 1, opp_overlap 2875785 2875786 2875788 GCCGAACTGATCGAA CGCGGCA-GGGCGCTGCCGGCCAC ACCC ATTGCCGACAGCGCCGACGACGCG CTGGCGCTGCTGATT TERM 1480 2877410 - 2877424 + G 71 -2.7 -4.67353 | overlap 2877411 CGCACCGTACTGCTG ACCGG CGCCA CCGGC TTTTTGGGTCGCTAC TERM 1481 2877769 - 2877751 - g 72 -11.6 -3.53012 | opp_overlap 2877751 GCTGTTCGGCCCAAA CGCGGCGG GCA CCGCCGAG TTGCTTCGGCTGGCG TERM 1482 2877751 - 2877769 + G 70 -11.6 -3.35813 | opp_overlap 2877751 GCTGTTCGGCCCAAA CGCGGCGG GCA CCGCCGAG TTGCTTCGGCTGGCG fadD9 2875091 - 2878597 + | putative fatty-acid-CoA ligase TERM 1483 2879245 - 2879222 - g 72 -11.7 -3.53091 | gap 1, opp_overlap 2879237, overlap 2879225 ACGGCTTCTCCCAAA CGACCGCCGG GGTGG CCGGCGG-CG CCGGTGGTTCCGCGG TERM 1484 2879406 - 2879464 + G 71 -14.3 -2.85124 | opp_overlap 2879382, overlap 2879377 2879436 2879453 2879460 2879462 CGGCACAGGTGGAGC CGGCGGGGCCGGCGGCGACGCCCCA TTGATCGGC TGGGGCGGCAACGGCGGGCCCGGCG GTTTCGCTGCTTTTG TERM 1485 2879515 - 2879484 - g 72 -11.4 -3.53012 | opp_overlap 2879479 2879479 2879511 CGCTGCTTTTGGAAA CGGTGGGGCCGGCG GCAA CGGCGGCGCCAGCG GTTCGCTCTTTGGCG TERM 1486 2879876 - 2879912 + G 70 -10.8 -3.53811 | gap 1, opp_overlap 2879852 2879849, overlap 2879858 2879877 ACGGCGGCCTGGGCG GCGCCGGCGC-TGTGCT CATC GGCACGGGCGTCGGCGG TTTCGGCGGCCTCGG TERM 1487 2880097 - 2880136 + G 95 -20 -2.75957 | gap 1, overlap 2880087 GCCGCGCTGATCGGC CTG-GGCGCCGGCGGTGCC GGC GGTGCCGGCGGCGCCACAG TCGTTGGACTTGGTG PE_PGRS44 2878771 - 2880411 + | PE-PGRS family protein ruvB 2881462 - 2880428 - | Holliday junction DNA helicase B ruvA 2882049 - 2881459 - | Holliday junction DNA helicase motor protein ruvC 2882612 - 2882046 - | Holliday junction resolvase JTY_2612 2882721 - 2882966 + | hypothetical protein JTY_2613 2882963 - 2883367 + | hypothetical protein JTY_2614 2883584 - 2884204 + | hypothetical protein JTY_2615 2884215 - 2884709 + | hypothetical protein JTY_2616 2884706 - 2885137 + | hypothetical protein JTY_2617 2885219 - 2885425 + | putative integral membrane protein JTY_2618 2885431 - 2885610 + | putative integral membrane protein TERM 1488 2885663 - 2885706 + G 74 -12.2 -3.55444 | gap 1, overlap 2885667 2885672 GGTACGGTGGCGGGC CGTG-CTGCTGGCCGCGGTCG CGG CGTGCGCGGCCTGCGGTCTCG TTTACGAGCTCGCGC TERM 1489 2885667 - 2885701 + G 74 -14.8 -3.00704 | overlap 2885663 2885672 CGGTGGCGGGCCGTG CTGCTGGCCGCGGTCG CGG CGTGCGCGGCCTGCGG TCTCGTTTACGAGCT TERM 1490 2885672 - 2885703 + G 71 -13.7 -2.91144 | gap 1, overlap 2885667 2885663 GCGGGCCGTGCTGCT GGCCGC-GGTCGCG GCGTG CGCGGCCTGCGGTC TCGTTTACGAGCTCG speE 2885607 - 2887178 + | spermidine synthase JTY_2620 2887289 - 2887576 + | hypothetical protein JTY_2621 2887563 - 2888003 + | hypothetical protein JTY_2622 2888779 - 2888024 - | hypothetical protein JTY_2623 2889508 - 2888912 - | hypothetical protein tesB2 2890361 - 2889516 - | putative acyl-CoA thioesterase II JTY_2625 2891289 - 2890390 - | hypothetical protein TERM 1491 2891725 - 2891711 - g 72 -11.4 -3.54129 | TACACCTCCGCCAAA GGCGAG CAG CTCGCC GTGACACCATACGCA pdxH 2891417 - 2892091 + | pyridoxamine 5'-phosphate oxidase PPE42 2892265 - 2894007 + | PPE family protein JTY_2628 2895084 - 2894029 - | hypothetical protein pimA 2896220 - 2895084 - | alpha-mannosyltransferase TERM 1492 2895527 - 2895483 - G 82 -12.7 -3.92373 | overlap 2895484 CACCTGACCCAGAAA GCGCAGGTGCGCCGCCAAACG GCC CGCCTGGCCGCGCAACTGGTC GGCGTCGCCGTGGCC TERM 1493 2895525 - 2895484 - G 72 -13.7 -2.95102 | gap 1, overlap 2895483 ACCTGACCCAGAAAG CGCAGGTGCGCCGCCAAACG GCC CGCCTGGCCGCGCAACTG-G TCGGCGTCGCCGTGG JTY_2630 2897181 - 2896231 - | lipid A biosynthesis lauroyl acyltransferase pgsA1 2897831 - 2897178 - | putative phosphatidylinositol synthase JTY_2632 2898415 - 2897828 - | hypothetical protein thrS 2900486 - 2898408 - | threonyl-tRNA synthetase JTY_2634 2900595 - 2900822 + | hypothetical protein TERM 1494 2900801 - 2900834 + T 70 -12.4 -3.14132 | gap 1, opp_overlap 2900777, overlap 2900799 CCAGGTCTGGATTTC CGGCGCCGGCCGGCT CCGTT AGCCG-TCGGCTCCG TTGGTGCCGGCCAGG PE_PGRS45b 2901988 - 2900819 - | PE-PGRS family protein PE_PGRS45a 2902206 - 2901976 - | PE-PGRS family protein JTY_2637 2902551 - 2903051 + | hypothetical protein JTY_2638 2903508 - 2903068 - | putative transmembrane protein JTY_2639 2903655 - 2904332 + | hypothetical protein JTY_2640 2904670 - 2904317 - | hypothetical protein JTY_2641 2905108 - 2904683 - | putative transmembrane protein TERM 1495 2904891 - 2904872 - G 89 -10.6 -4.19704 | overlap 2904860 CAACGCGACCGAAAA CGCCGCGG CGAT CCGCGCCG GCGTCGAGCCGACCA JTY_2642 2905776 - 2905105 - | putative transcriptional regulatory protein JTY_2643 2905854 - 2906675 + | putative methyltransferase TB31.7 2906811 - 2907704 + | hypothetical protein JTY_2645 2908525 - 2907707 - | hypothetical protein JTY_2646 2909721 - 2908540 - | putative transmembrane alanine and leucine rich protein JTY_2647 2910211 - 2909780 - | hypothetical protein JTY_2648 2911966 - 2910725 - | hypothetical protein JTY_2649 2912276 - 2912638 + | hypothetical protein JTY_2650 2912985 - 2914109 + | hypothetical protein JTY_2651 2914111 - 2914650 + | hypothetical protein TERM 1496 2915820 - 2915835 + G 70 -6 -4.17048 | overlap 2915812 TGTGCTTGCCGGGGT CACCGG CAAC CCGGCG TTCTTTTCCACCGCG JTY_2652 2914789 - 2916087 + | hypothetical protein JTY_2653 2916407 - 2916126 - | hypothetical protein JTY_2654 2917037 - 2916552 - | hypothetical protein PE_PGRS46 2919724 - 2917322 - | PE-PGRS family protein TERM 1497 2918484 - 2918514 + g 91 -16 -3.93369 | GCCTCGCCGACGCCA CCGGCGGGGCCGGG ACC CCCGTTCCCGCCAG TTTGATTCCCGTTGC TERM 1498 2918578 - 2918591 + g 71 -9.5 -3.85698 | opp_overlap 2918576 GGTTCGCAATCGAGC CGGGG TTGA CCCCG TTTGTCCCGGCCAGA TERM 1499 2919608 - 2919566 - G 73 -11.2 -3.66018 | overlap 2919587 GTACGACCCGAACAA GGCCGCAACTGCCGCCGA AACCTCA TCCGCGGCAGCCGCCACC ACCCCCGTGGTCGGC JTY_2656 2919753 - 2919995 + | hypothetical protein TERM 1500 2920014 - 2920004 - g 70 -8.2 -3.91897 | overlap 2920005 GCGCTGAGTGATAAA CCCG ACC CGGG CCCGGCGGATGCGAT JTY_2657 2919996 - 2920673 + | hypothetical protein dedA 2920869 - 2921525 + | putative transmembrane protein JTY_2659 2921688 - 2922134 + | hypothetical protein JTY_2660 2922641 - 2922309 - | hypothetical protein JTY_2661 2923120 - 2922761 - | putative transcriptional regulatory protein cadI 2923222 - 2923680 + | cadmium inducible protein JTY_2663 2923816 - 2924196 + | putative transcriptional regulatory protein arsC 2924193 - 2925689 + | putative arsenic-transport integral membrane protein JTY_2665 2926133 - 2925816 - | hypothetical protein TERM 1501 2925945 - 2925906 - G 71 -9.3 -3.86897 | gap 1 CGTAGTCTCGACAAA GCGGCTGCCCGAGATCGC GTGCG ACGATATCGGG-AGCGGC TGCGGCAACGAGGTC TERM 1502 2926412 - 2926393 - R 72 -4.2 -4.58395 | opp_overlap 2926392 2926395, overlap 2926396 GTTATCGGCCAAAAA CATGGTCA GGCT CGACCGTG CATTGCTGGTTTTCC JTY_2666 2927491 - 2927270 - | hypothetical protein JTY_2667 2927877 - 2927488 - | hypothetical protein JTY_2668 2927783 - 2928055 + | hypothetical protein JTY_2669 2928154 - 2928387 + | hypothetical protein JTY_2670 2928398 - 2928652 + | hypothetical protein TERM 1503 2928808 - 2928847 + F 78 -12.2 -3.7795 | gap 1, opp_overlap 2928814 2928816, overlap 2928810 AAATCCCCAGACCCC TACACACAGCGACACGGCG ACC CGCCGTCTC-CTGAGTGTG TTTGCTAAAATTTCG TERM 1504 2928810 - 2928845 + F 76 -12.6 -3.46936 | gap 1, opp_overlap 2928814 2928816, overlap 2928808 ATCCCCAGACCCCTA CACACAGCGACACGGCG ACC CGCCGTCTC-CTGAGTG TGTTTGCTAAAATTT JTY_2673 2929372 - 2930175 + | putative transposase for insertion sequence element IS1081 TERM 1505 2930201 - 2930169 - f 71 -11.4 -3.48924 | overlap 2930170 TCACGGTCGACACAA TGCATAACGTCAAC CTACT GTTGACGTCATGCC GGAGCCCACACCCAC TERM 1506 2930200 - 2930170 - f 75 -14.9 -2.6914 | overlap 2930169 CACGGTCGACACAAT GCATAACGTCAAC CTACT GTTGACGTCATGC CGGAGCCCACACCCA clpX' 2930197 - 2930955 + | putative ATP-dependent protease ATP-binding subunit JTY_2675 2931034 - 2931555 + | putative exported alanine and valine rich protein JTY_2676 2931584 - 2932054 + | hypothetical protein JTY_2677 2933141 - 2932032 - | hypothetical protein ribD 2933140 - 2933916 + | hypothetical protein TERM 1507 2935402 - 2935374 - g 72 -8.8 -4.07568 | overlap 2935396 GCTCGGTGTGCAAAA CGACCCGATCGT GGGCA ACGAAGGGGTCG CCGCGACCGCCGCCA JTY_2679 2933983 - 2935569 + | putative secreted protease TERM 1508 2935734 - 2935754 + G 70 -13.3 -3.01712 | CGGCCGCCGTCCTGT CGGTGCTGC ACC GCAGCATCG TATTGACGACCAACG JTY_2680 2935592 - 2936893 + | putative transmembrane protein JTY_2681 2937062 - 2937472 + | hypothetical protein JTY_2682 2938292 - 2937540 - | hypothetical protein JTY_2683 2938984 - 2938289 - | hypothetical protein TERM 1509 2938891 - 2938862 - G 74 -5.1 -4.56597 | CTGCTGTTTGAAAAA CGTGGACGCG-TC GTCGAT GATCGCGT-CACG CTGGTCACCGAGCGC hemY 2940348 - 2938990 - | protoporphyrinogen oxidase TERM 1510 2939446 - 2939425 - G 72 -11.5 -3.57615 | overlap 2939426 GGAACAGTGCGGAAA CGCGGTGCC GCCG GGCACCGCC AGCGCCACCACCGCC TERM 1511 2939445 - 2939426 - G 72 -15 -2.74248 | overlap 2939425 GAACAGTGCGGAAAC GCGGTGCC GCCG GGCACCGC CAGCGCCACCACCGC hemE 2941418 - 2940345 - | uroporphyrinogen decarboxylase TERM 1512 2942263 - 2942253 - g 72 -8.2 -4.11216 | CGCGCACCGCGAAAA GCGC CCC GCGC GGTTCGGCGCCGACC JTY_2686 2941471 - 2942301 + | enoyl-CoA hydratase JTY_2687 2942563 - 2943195 + | hypothetical protein TERM 1513 2944274 - 2944229 - g 85 -15.4 -3.70902 | TGGGTCAGACGGAAA CCGGCAGCCGCCGCACG-GCTG GATG CGGCGCGCGCGGCG-CTGACGG AGGTGTCGCAACGGG JTY_2688 2943197 - 2944513 + | hypothetical alanine rich protein dxs1 2946426 - 2944510 - | 1-deoxy-D-xylulose 5-phosphate synthase TERM 1514 2945646 - 2945626 - G 79 -16.1 -3.05596 | CACCGGTGCACCGAA GCGCCGCGC GCT GCGCAGCGC GACCTCCACCGCCCG TERM 1515 2945889 - 2945908 + g 72 -11.4 -3.50853 | CGACGCCCCCGATTG TGGGCGCG TAGC TGCGCCCA TTGTCGTTGACCACG JTY_2690 2946570 - 2947067 + | hypothetical protein TERM 1516 2947887 - 2947911 + G 76 -6.3 -4.57073 | ATCCGAGTATCTATC CAGCGTCGAGT GGG ACACGCTGCTG TTTTTCGCCGGGCTG arsA 2947072 - 2948361 + | putative arsenic-transport integral membrane protein arsB1 2948441 - 2949727 + | putative arsenic-transport integral membrane protein JTY_2693 2950496 - 2949738 - | putative antibiotic-transport integral membrane leucine and alanine and valine rich protein ABC transporter TERM 1517 2950205 - 2950161 - G 71 -2.7 -4.65168 | gap 1, overlap 2950164 ACGATAGCCGAAAAA GAC-CGACAGCGGCACCGGG GTTACT CGCAGCGCCGTCATCGTGCC CGCGTCTACGTCGTC JTY_2694 2951206 - 2950493 - | putative antibiotic-transport integral membrane leucine and valine rich protein ABC transporter JTY_2695 2952108 - 2951203 - | putative antibiotic-transport ATP-binding protein ABC transporter JTY_2696 2953520 - 2952303 - | hypothetical alanine and valine and glycine rich protein JTY_2697 2955667 - 2953676 - | putative integral membrane alanine and valine and leucine rich protein ceoB 2955802 - 2956485 + | trk system potassium uptake protein ceoC 2956482 - 2957144 + | trk system potassium uptake protein JTY_2700 2957826 - 2957155 - | putative integral membrane alanine and leucine rich protein TERM 1518 2957392 - 2957376 - G 74 -2.1 -4.7254 | overlap 2957380 ACCGGGCAGCAAAAA CCAGCGT CCA ACCCAGG GTGGCGACGTCAAAC TERM 1519 2957459 - 2957413 - G 71 -9.3 -3.85165 | overlap 2957417 2957418 GACGTCAAACGCAAA GACAGCGCGGGACACG-TCGCGC CAG GCGCGATCGCG-CCCGCTGAGCC AGCTCCACAAGTAGC TERM 1520 2957755 - 2957738 - G 71 -2.7 -4.58213 | overlap 2957739 GAAGCAACCACAAAA GTCACCA CCGG TAATGAC GAATAGACCAGGCCG JTY_2701 2958225 - 2957857 - | hypothetical protein JTY_2702 2958374 - 2959081 + | hypothetical alanine rich protein JTY_2703 2960066 - 2959287 - | hypothetical alanine and glycine and valine rich protein TERM 1521 2959978 - 2960022 + g 71 -12.8 -3.27525 | gap 1, overlap 2959974 ACCACGGTGTCCTCC GGTCGGACGTGCTCGTCGGCC GGCT GGACGG-GGGCGTGTCCGGCC TTGCGTTTGCCACCG dut 2960605 - 2960141 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 1522 2960752 - 2960790 + G 78 -10.3 -4.11216 | gap 1 TTGAAGTAAACCTGG GCGTTGCG-GCCCTACCC GACT GGGTACCGTTCGCAACGC TTTTCACAGTCGCAG JTY_2705 2960631 - 2961116 + | putative alanine rich transmembrane protein JTY_2706 2961423 - 2961121 - | hypothetical protein JTY_2707 2961661 - 2962311 + | putative secreted alanine rich protein suhB 2963193 - 2962321 - | putative extragenic suppressor protein ppgK 2963316 - 2964113 + | polyphosphate glucokinase sigA 2964293 - 2965879 + | RNA polymerase sigma factor JTY_2712 2966661 - 2966272 - | hypothetical protein JTY_2711 2965916 - 2966344 + | hypothetical protein JTY_2713 2966915 - 2966658 - | hypothetical protein TERM 1523 2966874 - 2966886 + g 72 -5.5 -4.3739 | opp_overlap 2966822, overlap 2966841 GCCAAGCTGCCCTCC GGAGC CGA GCTTC TTTTCTGCCAGCATC JTY_2714 2967031 - 2968005 + | putative transmembrane alanine and leucine rich protein JTY_2715 2968254 - 2968006 - | hypothetical protein TERM 1524 2968193 - 2968220 + g 71 -14.8 -2.55722 | overlap 2968192 2968189 GTGTCGCTGCCGGTC CCGTCGTCGACG CGTT CGTCGGCGTCGG TACGTTCAATCGTCT JTY_2716 2968297 - 2968743 + | putative transmembrane protein sigB 2968919 - 2969890 + | RNA polymerase sigma factor TERM 1525 2969919 - 2969976 + F 100 -17.1 -4.09685 | gap 3, opp_overlap 2969919, overlap 2969920 GAGCCAGGTAGCAGA CGGTATGCCCGCCGCGCCA--GCGGCGG GCATA CCGCTGCGGTGGGGCGGCGGGCA-ACCA TTTTCGCAGCTGGCC TERM 1526 2969952 - 2969919 - f 100 -28.3 -2.81133 | opp_overlap 2969919 2969920 GAGCCAGGTAGCAGA CGGTATGCCCGCCGC GCCA GCGGCGGGCATACCG CTGCGGTGGGGCGGC TERM 1527 2969920 - 2969975 + F 93 -20.6 -3.05597 | gap 3, opp_overlap 2969919, overlap 2969919 AGCCAGGTAGCAGAC GGTATGCCCGCCGCGCCA--GCGGCGG GCATA CCGCTGCGGTGGGGCGGCGGGCA-ACC ATTTTCGCAGCTGGC ideR 2970023 - 2970715 + | iron-dependent repressor and activator JTY_2719 2971786 - 2970728 - | hypothetical protein sthA 2971899 - 2973305 + | soluble pyridine nucleotide transhydrogenase TERM 1528 2973391 - 2973360 - f 78 -12.2 -3.72695 | overlap 2973378 AGGCTTGCCAGCAAA TTCGCCGCCGCCCA CGAA CGGTCGGCGTCGAA CGTGGCCCCGCGCTT JTY_2721 2973523 - 2974497 + | hypothetical alanine and leucine rich protein TERM 1529 2974653 - 2974673 + G 70 -11.1 -3.56325 | overlap 2974650 GGCGGGCATTCCGGA TCGCCGGTT CCG GGCCGGCGA TTCTGCTTATCCACG JTY_2722 2974556 - 2975581 + | putative hydrolase JTY_2723 2975630 - 2976316 + | hypothetical protein JTY_2724 2976819 - 2976325 - | hypothetical protein JTY_2725 2977335 - 2976871 - | hypothetical protein TERM 1530 2976959 - 2976946 - G 70 -2.3 -4.63218 | overlap 2976949 GTCCGCGGAAGAAAA CGACC GGTA GACCG ACGCGAACCGTAGGT JTY_2726 2977995 - 2977498 - | hypothetical protein TERM 1531 2977810 - 2977778 - G 73 -14.7 -2.90075 | overlap 2977762 GCCGCGGCAAGCAGA GCCAGCCCCACCGTC GTG GCCGGCGGGACGGGC CTGCTGCCATGCCCA TERM 1532 2978798 - 2978779 - g 70 -11.4 -3.46602 | opp_overlap 2978779, overlap 2978780 2978791 2978792 GGTGCGACAGCAGAA CGTCGCCG ACAA CGGCGACA TCGTTGCGGCCATGA lexA 2978303 - 2978956 + | repressor JTY_2728 2981077 - 2978978 - | putative transmembrane alanine and glycine rich protein TERM 1533 2981015 - 2980997 - G 78 -16 -3.14132 | CGTGGGCGCCAGCAA CACGGCGG TCA CCGCCGTG GCCGCCAAGCCGAGC JTY_2729 2981093 - 2981341 + | hypothetical protein JTY_2730 2981367 - 2982560 + | putative integral membrane protein fadE20 2983749 - 2982589 - | putative acyl-CoA dehydrogenase hflX 2985372 - 2983885 - | putative GTP-binding protein dapF 2986258 - 2985389 - | diaminopimelate epimerase miaA 2987227 - 2986283 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1534 2986972 - 2987010 + g 77 -12.2 -3.65902 | CGATCGCCTCGATGT CCGCCGCGGCGGCCCGCT GGT AGCGCGCCACGGTCGCGG TTTCGGTGACATCCA JTY_2735 2987919 - 2987224 - | hypothetical alanine rich protein TERM 1535 2987833 - 2987806 - G 74 -12.6 -3.61398 | GCTTTTCGGCAACAA GGAGGCCGCCGC GATC ACCGCGGCCCCC AAATCGGCCAGCTCG JTY_2736 2988933 - 2988028 - | putative integral membrane alanine and valine and leucine rich protein TERM 1536 2989062 - 2989039 - g 77 -3.6 -4.83722 | opp_overlap 2989043, overlap 2989031 2989029 AATATCACAACAAAA CGTTGCGCGC AGAC GCGTGCTTCG TCATCGGCTTCGGAA JTY_2737 2989000 - 2989476 + | hypothetical protein JTY_2738 2989484 - 2990836 + | hypothetical alanine and arginine rich protein JTY_2739 2991447 - 2990833 - | putative transmembrane protein JTY_2740 2992982 - 2991444 - | hypothetical alanine, arginine-rich protein TERM 1537 2992624 - 2992658 + g 79 -7.6 -4.56597 | overlap 2992626 2992651 CCGAAGACAACGTCT ACCCACGGCGCCCTGC GCA GCACGGCGTCGCGGTC TTTTTGCGCCAGGCA TERM 1538 2992626 - 2992656 + g 88 -14.6 -3.90048 | overlap 2992624 2992651 GAAGACAACGTCTAC CCACGGCGCCCTGC GCA GCACGGCGTCGCGG TCTTTTTGCGCCAGG TERM 1539 2993472 - 2993424 - gR 74 -9 -3.86944 | gap 2, opp_overlap 2993444, overlap 2993425 2993428 CCGACAAGTATCAAA CCGATGGTGACCCCAGAACCTCCG GTC CGG-GATT-TGGCGTCACCATCCA TCCCCGCAGTCTTGA JTY_2742 2995010 - 2994018 - | hypothetical protein JTY_2741 2993279 - 2994133 + | hypothetical protein TERM 1540 2994948 - 2994974 + gT 72 -4.4 -4.44046 | overlap 2994950 AGCCCTGTTGAAGGC CGGGAGGTAC CCGGCAA GTATCTCCAG TTTGTTTCGCGTCCA recX 2995544 - 2995020 - | recombination regulator TERM 1541 2995472 - 2995500 + gTr 100 -20.3 -3.04144 | GGGATCGCGCGGTGA GCAGGCGCAGGCA CAG TGCCCGCGCCTGC TCTTCGCGCTCAGAA recA 2997882 - 2995510 - | recombinase A TERM 1542 2997807 - 2997771 - GH 100 -19.6 -3.71527 | gap 1, opp_overlap 2997769 2997768 TCGGAATGACCGAAA TCGGCTGACGCGCCTCG TCGC CGAGGCGCATCA-CCGA ACCTTTGCCGTAACT JTY_2745 2998077 - 2998250 + | hypothetical cysteine rich protein JTY_2746 2998470 - 2998264 - | hypothetical protein JTY_2747 2999647 - 2998481 - | putative alanine rich transferase TERM 1543 2998633 - 2998589 - G 80 -15 -3.40403 | gap 1, overlap 2998592 CCTCGGCGACGACAA CACCTCGTTGACCGCCGCCAC CAGC GCGTCGGCGGTCAACG-GCCG GATCAGCACCGCGCT TERM 1544 2998630 - 2998592 - G 80 -17.5 -2.56271 | gap 1, overlap 2998589 CGGCGACGACAACAC CTCGTTGACCGCCGCCAC CAGC GCGTCGGCGGTCAACG-G CCGGATCAGCACCGC ephG 2999691 - 3000140 + | epoxide hydrolase PE_PGRS47a 3000372 - 3000404 + | PE-PGRS family protein TERM 1545 3001264 - 3001310 + G 100 -21.4 -3.05844 | GCACGGTGGCTTCGG CAGTGCTGCCGGCGGCGACGGC GGC GCGGGCGGCGCCGGCGGCACGG TCTTCGGCTCGGGCG PE_PGRS47 3000416 - 3001690 + | PE-PGRS family protein JTY_2751 3001962 - 3001714 - | hypothetical arginine rich protein TERM 1546 3001885 - 3001870 - G 73 -6 -4.33105 | overlap 3001872 CAACCAGCACCAAAA GCCCGG TACG CCGCGC CGAATCGCGGGCTGA JTY_2752 3002570 - 3001983 - | hypothetical arginine rich protein JTY_2753 3003454 - 3002642 - | putative membrane alanine rich protein TERM 1547 3003067 - 3003032 - G 77 -11 -3.84639 | gap 1, overlap 3003022 CAACAGCGAGAAGAA CCCGCGTTCGGAGGCGC CCA GCGCCGAC-ATCGCGGG TCGCGCGGCCGAGCC 35kd_ag 3004285 - 3003473 - | conserved 35 kda alanine rich protein JTY_2755 3004753 - 3004415 - | putative transcriptional regulatory protein pgsA3 3005453 - 3004824 - | putative pgp synthase pgsA3 JTY_2757 3005484 - 3006008 + | N-acetylglutamate synthase TERM 1548 3006022 - 3006063 + TF 100 -24.1 -2.78463 | gap 1, opp_overlap 3006022 3006029, overlap 3006029 AGCCCGGCGAGCAGA CGCAAAATCGCCTCATTTCG GCA CGAAATG-GGCGATTTTGCG TCTGCTCGGCGGGCT TERM 1549 3006063 - 3006022 - Tf 100 -24.1 -2.78463 | gap 1, opp_overlap 3006022 3006029, overlap 3006029 AGCCCGGCGAGCAGA CGCAAAATCGCCTCATTTCG GCA CGAAATG-GGCGATTTTGCG TCTGCTCGGCGGGCT TERM 1550 3006056 - 3006029 - Tf 100 -13.6 -4.24948 | gap 1, opp_overlap 3006022 3006029, overlap 3006022 CGAGCAGACGCAAAA TCGCCTCATTTCG GCA CGAAATG-GGCGA TTTTGCGTCTGCTCG TERM 1551 3006029 - 3006056 + TF 100 -13.6 -4.24948 | gap 1, opp_overlap 3006029 3006022, overlap 3006022 CGAGCAGACGCAAAA TCGCCTCATTTCG GCA CGAAATG-GGCGA TTTTGCGTCTGCTCG ftsK 3008728 - 3006077 - | putative cell division transmembrane protein JTY_2759 3008727 - 3009041 + | hypothetical protein JTY_2760 3009038 - 3009856 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 1552 3009953 - 3009925 - g 70 -6.6 -4.25104 | gap 1, overlap 3009929 GGCCGTGGAGCAAAA CGAACCACCTGGC CGCC GCCTGGTGGA-CG ACGACCTCGCGGACT TERM 1553 3009950 - 3009929 - g 75 -11.5 -3.71672 | overlap 3009925 GTGGAGCAAAACGAA CCACCTGGC CGCC GCCTGGTGG ACGACGACCTCGCGG JTY_2761 3009860 - 3010750 + | hypothetical protein JTY_2762 3012413 - 3010737 - | hypothetical protein TERM 1554 3011029 - 3011015 - G 70 -3.5 -4.4648 | overlap 3011018 AGCCCGACGACAAAA TGAGC CGCTC GCCCA GGGTGATATCGCCGA dapA 3013346 - 3012444 - | dihydrodipicolinate synthase thyX 3014167 - 3013415 - | FAD-dependent thymidylate synthase hsdS' 3014686 - 3014411 - | putative type I restriction/modification system specificity determinant hsdM 3016305 - 3014683 - | putative type I restriction/modification system DNA methylase JTY_2767 3016808 - 3016392 - | hypothetical protein JTY_2768 3017071 - 3016805 - | hypothetical protein JTY_2769 3017492 - 3017097 - | hypothetical protein JTY_2770 3017758 - 3017489 - | hypothetical protein hsdS 3018862 - 3017768 - | putative type I restriction/modification system specificity determinant JTY_2772 3019131 - 3018859 - | hypothetical protein JTY_2773 3019278 - 3019147 - | hypothetical protein dfrA 3019831 - 3019352 - | putative dihydrofolate reductase thyA 3020693 - 3019902 - | thymidylate synthase TERM 1555 3020930 - 3020946 + G 73 -15.1 -2.8789 | TTCACTCCCGATGGT CCGGGCC GCT GGCCCGG TGTGGTGATGTTTCC JTY_2776 3020858 - 3021595 + | putative alanine rich hydrolase TERM 1556 3021608 - 3021653 + T 100 -22.1 -2.71011 | opp_overlap 3021608 3021610 3021617, overlap 3021610 3021617 TAGCCCCGCCAAGCA GACGCAGAATCGCATTAATCG CGCC CGGTTTGTGCGATTCTGCGTC TGCTTGGCAGCACCT TERM 1557 3021653 - 3021608 - T 86 -17.7 -2.71144 | opp_overlap 3021608 3021610 3021617, overlap 3021610 3021617 TAGCCCCGCCAAGCA GACGCAGAATCGCATTAATCG CGCC CGGTTTGTGCGATTCTGCGTC TGCTTGGCAGCACCT TERM 1558 3021651 - 3021610 - T 77 -14.5 -2.90075 | opp_overlap 3021610 3021608 3021617, overlap 3021608 3021617 GCCCCGCCAAGCAGA CGCAGAATCGCATTAATCG CGCC CGGTTTGTGCGATTCTGCG TCTGCTTGGCAGCAC TERM 1559 3021610 - 3021651 + T 91 -18.9 -2.90075 | opp_overlap 3021608 3021610 3021617, overlap 3021608 3021617 GCCCCGCCAAGCAGA CGCAGAATCGCATTAATCG CGCC CGGTTTGTGCGATTCTGCG TCTGCTTGGCAGCAC fabG 3022592 - 3021810 - | 3-ketoacyl-(acyl-carrier protein) reductase JTY_2778 3022942 - 3022589 - | hypothetical protein PPE43 3024300 - 3023116 - | PPE family protein TERM 1560 3023439 - 3023417 - G 77 -13.4 -3.53091 | opp_overlap 3023428 ACCGTGTGCGCCAAA CCAGCTGCTG CCG CGGCAGCTGG AACGGCATCGGCGGC PE27 3025207 - 3024380 - | PE family protein TERM 1561 3025470 - 3025511 + r 70 -10.2 -3.54436 | gap 3, overlap 3025481 GCCGCGGGAGGGTTA GCGCAATGTGGCCG--CGGCG GCG CGCTGGTCGGCCGCGT-GCGC TTGTCTCGGTGTCTC PPE44 3026679 - 3025531 - | PPE family protein JTY_2782 3027255 - 3026803 - | hypothetical protein JTY_2783 3027814 - 3027341 - | putative transmembrane protein dapB 3028563 - 3027826 - | dihydrodipicolinate reductase JTY_2785 3028978 - 3028574 - | hypothetical protein JTY_2786 3029131 - 3029592 + | hypothetical protein JTY_2787 3030525 - 3029596 - | putative oxidoreductase JTY_2788 3031777 - 3030707 - | hypothetical protein JTY_2789 3032405 - 3031935 - | hypothetical protein TERM 1562 3032189 - 3032220 + g 83 -9.4 -4.4078 | gap 1 GATCGGCGTCGGTAA CGGTGCACGTCG-TG GTC CAGCGCCGTCCACCG TTTTCGTTGCGACCG JTY_2790 3032976 - 3032437 - | putative transcriptional regulatory protein TERM 1563 3033190 - 3033247 + G 91 -12.8 -4.2461 | gap 3, overlap 3033193 3033195 TCACCGACGCGGATT TCAAGGCGGCAGGCGCGCAACTGGTCGGC ACC GCCGACCAGGTGTGGGCC-GACG-CT-GA TTTATTGCTCAAGGT TERM 1564 3033193 - 3033246 + G 78 -15.9 -3.14284 | gap 1, overlap 3033190 3033195 CCGACGCGGATTTCA AGGCGGCAGGCGCGCAACTGGTCGGC ACC GCCGACCAGGTGTGGGCC-GACGCTG ATTTATTGCTCAAGG TERM 1565 3033195 - 3033244 + G 100 -20.7 -3.12942 | gap 1, overlap 3033193 3033190 GACGCGGATTTCAAG GCGGCAGGCGCGCAACTGGTCGGC ACC GCCGACCAGGTGTGGGCC-GACGC TGATTTATTGCTCAA ald_a 3033042 - 3033440 + | secreted L-alanine dehydrogenase aldB 3033437 - 3034156 + | secreted L-alanine dehydrogenase JTY_2793 3035205 - 3034171 - | putative alanine rich oxidoreductase TERM 1566 3035145 - 3035096 - G 95 -18.5 -3.72576 | CCGCCGGCGACGAAA CCAAGCCCGCCAGCGTTGGACAC CGCC GCGGCCAACGCCGGGGTGCTCGG GCCGCCGGCCATCGG pepR 3036582 - 3035266 - | putative zinc protease gpsI 3038818 - 3036560 - | polyribonucleotide phosphorylase/polyadenylase TERM 1567 3037804 - 3037817 + g 77 -3.8 -4.72272 | GGTCGGTGAGGATGC GCTG CCGAAC CAGC TTTTTGGTCAGGGCA lppU 3039687 - 3039172 - | putative lipoprotein rpsO 3039969 - 3039700 - | 30S ribosomal protein S15 ribF 3041121 - 3040126 - | riboflavin kinase JTY_2799 3041332 - 3043095 + | hypothetical alanine rich protein sirR 3043180 - 3043866 + | putative transcriptional repressor fadE21 3045159 - 3043927 - | putative acyl-CoA dehydrogenase ltp1 3046390 - 3045185 - | putative lipid-transfer protein TERM 1568 3046437 - 3046449 + r 70 -10.5 -3.61894 | GTCACGCGACTTGCA CCCCG TCT CGGGG TTGTTCGGCAGCCTT JTY_2803 3047802 - 3046423 - | putative transposase TERM 1569 3046785 - 3046834 + g 77 -15.7 -3.01924 | gap 2 GGCGCGGGGTGCCCA GGGCCGCGTCGGAGAGTCCGCGC CGGCGA GCGCGGGCAC-CCGA-GAGGCCC TGTTGCCGCAGCATC JTY_2804 3048383 - 3047802 - | putative resolvase truB 3049481 - 3048585 - | tRNA pseudouridine synthase B JTY_2806 3050161 - 3049478 - | hypothetical protein JTY_2807 3051132 - 3050158 - | hypothetical protein TERM 1570 3051250 - 3051209 - R 100 -30.5 -2.78596 | opp_overlap 3051209 3051216, overlap 3051216 TACGGCGTGAGCAGA CGCAAAAGCCCCCATTTCG GGCC CGAAATGGGGGCTTTTGCG TCTGCTCGGCCAACC TERM 1571 3051209 - 3051250 + r 100 -30.5 -2.78384 | opp_overlap 3051209 3051216, overlap 3051216 TACGGCGTGAGCAGA CGCAAAAGCCCCCATTTCG GGCC CGAAATGGGGGCTTTTGCG TCTGCTCGGCCAACC TERM 1572 3051243 - 3051216 - R 100 -20 -4.24948 | opp_overlap 3051209 3051216, overlap 3051209 TGAGCAGACGCAAAA GCCCCCATTTCG GGCC CGAAATGGGGGC TTTTGCGTCTGCTCG TERM 1573 3051216 - 3051243 + r 100 -20 -4.24948 | opp_overlap 3051216 3051209, overlap 3051209 TGAGCAGACGCAAAA GCCCCCATTTCG GGCC CGAAATGGGGGC TTTTGCGTCTGCTCG lppV 3051840 - 3051277 - | putative lipoprotein JTY_2809 3053528 - 3051840 - | hypothetical protein TERM 1574 3051936 - 3051957 + g 73 -12.9 -3.28924 | opp_overlap 3051908 CGTGTTGTCGGGCAG CCCGGCGGC GATC GCCGCCAGG TTATAGCCGGACATC TERM 1575 3053297 - 3053355 + g 87 -17.2 -3.46602 | opp_overlap 3053274 3053273, overlap 3053283 CGGCCCTGTCGGCCG CCCGGGCAACCGCCAACGCCTCGTTGCC GTG GGCGTCGAGGTCTCGGCGAATGCCCGCG TTGTGGTGTGCCGCC JTY_2810 3053858 - 3053532 - | hypothetical protein JTY_2811 3053989 - 3054618 + | hypothetical protein JTY_2812 3054637 - 3056286 + | putative hydrolase JTY_2813 3056744 - 3056388 - | hypothetical protein TERM 1576 3056875 - 3056898 + rH 73 -11 -3.64103 | overlap 3056876 3056878 ATGCTGCAGGCCGGC GGAGCGGGAT GGTA ATCCCGCTCG TTTCACATATGCGTC TERM 1577 3056876 - 3056897 + rH 75 -14.5 -2.7814 | overlap 3056875 3056878 TGCTGCAGGCCGGCG GAGCGGGAT GGTA ATCCCGCTC GTTTCACATATGCGT JTY_2814 3058044 - 3057001 - | hypothetical arginine and alanine rich protein JTY_2815 3058043 - 3058510 + | hypothetical protein JTY_2816 3059315 - 3058686 - | hypothetical protein JTY_2817 3059088 - 3059492 + | hypothetical protein JTY_2818 3059489 - 3059680 + | hypothetical protein JTY_2819 3059879 - 3061033 + | hypothetical protein JTY_2820 3061267 - 3061524 + | hypothetical protein JTY_2821 3061629 - 3061940 + | hypothetical protein TERM 1578 3062118 - 3062162 + F 73 -11.4 -3.58037 | gap 1, opp_overlap 3062121 3062131, overlap 3062119 3062121 CGCGTGGTGGTCGAA GTAGGCCAGCACATCGTGGCG GCAG CGCCACAGGGTGC-GGCCTAG TTTGGCCAGTTCCTC TERM 1579 3062119 - 3062161 + F 75 -14.9 -2.74501 | gap 1, opp_overlap 3062121 3062131, overlap 3062118 3062121 GCGTGGTGGTCGAAG TAGGCCAGCACATCGTGGCG GCAG CGCCACAGGGTGC-GGCCTA GTTTGGCCAGTTCCT TERM 1580 3062121 - 3062159 + F 70 -13.1 -2.9162 | gap 1, opp_overlap 3062121 3062131, overlap 3062119 3062118 GTGGTGGTCGAAGTA GGCCAGCACATCGTGGCG GCAG CGCCACAGGGTGC-GGCC TAGTTTGGCCAGTTC TERM 1581 3062293 - 3062339 + F 87 -17.3 -2.91681 | gap 1, overlap 3062292 3062290 AGGTCATTGGTAGGC GACGGCCCTCCCGTCGT-CTCT TGCC GGAGTGCTACGGGAGGGCCGCC TGTGTGCGCTTGGAG JTY_2823 3062360 - 3062968 + | hypothetical protein TERM 1582 3063460 - 3063492 + G 70 -13.4 -3.03159 | gap 1 TCCACCGGCTCGGGC TCACCGGCGCC-ACC ACCG GGTCGGCGCCGGCGG TGTTCGGCCGGTTCG JTY_2824 3063039 - 3064448 + | putative transposase TERM 1583 3064463 - 3064473 + G 71 -3.2 -4.58395 | ATGCACAAACTGATC TCGT ATT ACGG TTTTTCGCGCATGCC TERM 1584 3064858 - 3064805 - g 78 -14.3 -3.62046 | CTAGCCGCCGAACAA GCCGAGCGCGGACGCACCCCCGTCG TGGT CGTCGAGGAAGCGCACCTGCTCGGC TATGACCAACTGGAG JTY_2825 3064445 - 3065257 + | hypothetical protein TERM 1585 3065316 - 3065284 - T 75 -14.8 -2.74701 | opp_overlap 3065285 3065286 3065288, overlap 3065281 ACACCCCGAACACCA CCGACCCCGCCGGA CATCT CCCGGCGGGGTCAT TTCATGACCAAACGT TERM 1586 3065285 - 3065315 + T 90 -15.4 -3.72576 | opp_overlap 3065284 3065281, overlap 3065286 3065288 CACCCCGAACACCAC CGACCCCGCCGG ACATCTC CCGGCGGGGTCA TTTCATGACCAAACG TERM 1587 3065286 - 3065314 + T 91 -18.9 -2.83403 | opp_overlap 3065284 3065281, overlap 3065285 3065288 ACCCCGAACACCACC GACCCCGCCGG ACATCTC CCGGCGGGGTC ATTTCATGACCAAAC TERM 1588 3065288 - 3065312 + T 79 -15.7 -2.96695 | opp_overlap 3065284 3065281, overlap 3065286 3065285 CCCGAACACCACCGA CCCCGCCGG ACATCTC CCGGCGGGG TCATTTCATGACCAA TERM 1589 3065414 - 3065425 + T 72 -7.2 -4.2349 | CGTCGTAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1590 3065485 - 3065496 + T 72 -7.2 -4.2349 | ACGGGGCGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1591 3065558 - 3065569 + T 72 -7.2 -4.2349 | TCAAAATGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1592 3065632 - 3065643 + T 72 -7.2 -4.2349 | TTTCCGTGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1593 3065704 - 3065715 + T 72 -7.2 -4.2349 | overlap 3065674 TCCTCGCGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1594 3065776 - 3065787 + T 72 -7.2 -4.2349 | overlap 3065746 TCCTCGCGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1595 3065855 - 3065866 + T 72 -7.2 -4.2349 | ATTTCGAGTTTACGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1596 3065932 - 3065943 + T 72 -7.2 -4.2349 | GATGCAGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1597 3066006 - 3066017 + T 72 -7.2 -4.2349 | CGCAAAGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1598 3066079 - 3066090 + T 72 -7.2 -4.2349 | GTGTCGAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1599 3066152 - 3066163 + T 72 -7.2 -4.2349 | GTGTCGAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1600 3066226 - 3066237 + T 72 -7.2 -4.2349 | TGATAAAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1601 3066297 - 3066308 + T 72 -7.2 -4.2349 | TCCCCGAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1602 3066370 - 3066381 + T 72 -7.2 -4.2349 | CGAACCTGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1603 3066443 - 3066454 + T 72 -7.2 -4.2349 | GTCAAGAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1604 3066515 - 3066526 + T 72 -7.2 -4.2349 | TTCGCTGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1605 3066587 - 3066598 + T 72 -7.2 -4.2349 | CGGGGCAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1606 3066661 - 3066672 + T 72 -7.2 -4.2349 | TCGAAGGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1607 3066735 - 3066746 + T 72 -7.2 -4.2349 | GCTGAAGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA JTY_2826 3067696 - 3066860 - | putative transposase JTY_2827 3068121 - 3067795 - | putative transposase TERM 1608 3068240 - 3068251 + r 72 -7.2 -4.2349 | AGGTTGGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1609 3068315 - 3068326 + r 72 -7.2 -4.2349 | GCTGAGGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1610 3068388 - 3068399 + r 72 -7.2 -4.2349 | GCTCCAAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1611 3068541 - 3068552 + r 72 -7.2 -4.2349 | ATGTGGAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1612 3068613 - 3068624 + r 72 -7.2 -4.2349 | CAATCCAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1613 3068685 - 3068696 + r 72 -7.2 -4.2349 | CCATGCGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1614 3068758 - 3068769 + r 76 -7.2 -4.24948 | TTGCCGGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGATCC TERM 1615 3068819 - 3068830 + r 72 -7.2 -4.2349 | ATTCAAGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1616 3068896 - 3068907 + r 72 -7.2 -4.2349 | GGCGCAAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1617 3068968 - 3068979 + r 72 -7.2 -4.2349 | CGACGAAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1618 3069044 - 3069055 + r 72 -7.2 -4.2349 | ATCCCATGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1619 3069121 - 3069132 + r 72 -7.2 -4.2349 | TCACCTGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1620 3069194 - 3069205 + r 72 -7.2 -4.2349 | CTGCCCGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1621 3069267 - 3069278 + r 72 -7.2 -4.2349 | TTCACGCGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1622 3069343 - 3069354 + r 72 -7.2 -4.2349 | AAGAGCAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1623 3069418 - 3069429 + r 72 -7.2 -4.2349 | ACGTCGTGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1624 3069492 - 3069503 + r 72 -7.2 -4.2349 | TCCTCAGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1625 3069565 - 3069576 + r 72 -7.2 -4.2349 | CATTGGTGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1626 3069636 - 3069647 + r 72 -7.2 -4.2349 | opp_overlap 3069616 CAGAAAAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1627 3069711 - 3069722 + r 72 -7.2 -4.2349 | AGGTGTTGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1628 3069785 - 3069796 + r 72 -7.2 -4.2349 | TGTTCAAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1629 3069860 - 3069871 + r 72 -7.2 -4.2349 | GGGATGTGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1630 3069932 - 3069943 + r 72 -7.2 -4.2349 | TCGAAATGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1631 3070003 - 3070014 + r 72 -7.2 -4.2349 | CGCACATGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1632 3070076 - 3070087 + r 72 -7.2 -4.2349 | GCCGCGAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1633 3070148 - 3070159 + r 72 -7.2 -4.2349 | GCAAAAAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1634 3070225 - 3070236 + r 72 -7.2 -4.2349 | CTCTATGGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA TERM 1635 3070264 - 3070284 + r 89 -11.1 -4.36595 | opp_overlap 3070263 3070262 CGACGTGCAAGAATT CCGGGTTGC AGT GCAACACGG TTTTAAGTTTCCGTC TERM 1636 3070299 - 3070310 + r 72 -7.2 -4.2349 | GTTTTAAGTTTCCGT CCCC TCTC GGGG TTTTGGGTCTGACGA JTY_2828 3070716 - 3070375 - | hypothetical protein JTY_2829 3071733 - 3070717 - | hypothetical protein JTY_2831 3072993 - 3071983 - | hypothetical protein JTY_2832 3074117 - 3072990 - | hypothetical protein JTY_2833 3075022 - 3074114 - | hypothetical protein TERM 1637 3074575 - 3074609 + g 77 -10.6 -3.81339 | opp_overlap 3074582, overlap 3074579 3074581 3074582 CGTCCAGCTCGAACC GGAAGTAGCCGACACG GTA CGGGTCGGCGTCTTTC TTTCCGTTGTGGATC TERM 1638 3074579 - 3074605 + g 79 -7.8 -4.51765 | opp_overlap 3074582, overlap 3074575 3074581 3074582 CAGCTCGAACCGGAA GTAGCCGACACG GTA CGGGTCGGCGTC TTTCTTTCCGTTGTG TERM 1639 3074581 - 3074603 + g 71 -9 -3.8535 | opp_overlap 3074582, overlap 3074579 3074575 3074582 GCTCGAACCGGAAGT AGCCGACACG GTA CGGGTCGGCG TCTTTCTTTCCGTTG JTY_2834 3075713 - 3075003 - | hypothetical protein JTY_2835 3076097 - 3075723 - | hypothetical protein TERM 1640 3076017 - 3076029 + g 75 -3.3 -4.72696 | CAGCTGGGTTGTGGT CAGCT CGA AGCCG TTCTTTTTCTTTGGC JTY_2836 3078532 - 3076094 - | hypothetical protein TERM 1641 3076679 - 3076711 + g 72 -11.9 -3.55444 | opp_overlap 3076663 CGTGGCCTCGCGGGG CCGCGCCGGGTCATC GCC GGTGATCGGGCGCAG TTTCGGGCGTGCCAA JTY_2837 3079473 - 3078529 - | hypothetical protein JTY_2838 3080298 - 3079651 - | hypothetical protein TERM 1642 3079881 - 3079852 - G 70 -10.7 -3.53012 | gap 1 GTGCTTGGGCCGAAA GTCGAGCCGGT-CG GCG CGCACCGACTCGGC GGTCCAGATGTGCAG JTY_2839 3081352 - 3080468 - | hypothetical protein JTY_2840 3082242 - 3081355 - | hypothetical protein TERM 1643 3082366 - 3082310 - R 83 -15.9 -3.13376 | opp_overlap 3082299, overlap 3082299 3082323 AAACTCAAGAAATCA CTTGATTTAGGAACGGGCTTCGGTCAG TGA CAGTACGAAACCCGTTCCAAACTCAAG TGCCCTGTACGGGCT TERM 1644 3082425 - 3082415 - R 86 -8.2 -4.60797 | overlap 3082416 CGGCGAGAGACAAAA CGCG CTT CGCG GACGACCGGCCGACG JTY_2841 3083092 - 3082547 - | hypothetical protein TERM 1645 3082777 - 3082748 - G 70 -10.7 -3.53091 | gap 1 ATGCTTGGGCCGAAA GTCGAGCCGGT-CG GCG CGCACCGACTCGGC GGTCCAGATGTGCAG JTY_2842 3083358 - 3083089 - | hypothetical protein TERM 1646 3083251 - 3083227 - G 70 -11.3 -3.53224 | GACGGCGGCCTCAAA CGCCTCGGCGG TGG CCGCCGACGGG TGCGTGATGCCACTG JTY_2843 3083771 - 3083379 - | hypothetical protein JTY_2844 3083983 - 3083768 - | hypothetical protein TERM 1647 3084093 - 3084134 + G 71 -3 -4.58283 | gap 3, overlap 3084096 3084099 CTCACCCTCAACCGG CCGCAGTCCCGCAACG-CGCT CTC GGCGGCGCTACGGGA-T-CGG TTTTTCGCGGCGTTG TERM 1648 3084317 - 3084293 - g 73 -14.3 -3.21099 | overlap 3084314 GCCGGCCATGACCAA GCCGGTGATCG GCG CGATCAACGGC GCCGCGGTCACCGGC echA16 3084030 - 3084779 + | enoyl-CoA hydratase ugpC 3085940 - 3084858 - | putative sn-glycerol-3-phosphate transport ATP-binding protein ABC transporter TERM 1649 3084983 - 3085015 + g 70 -13.3 -3.05384 | opp_overlap 3084974 3084930 3084971 ACACGATGCGCGGTG CGCGTGACGACCAGC CCC GCTGGTCGACCGGCG TTGCGTAGACGAAGG ugpBa 3087243 - 3086611 - | putative sn-glycerol-3-phosphate-transport integral membrane protein ABC transporter TERM 1650 3086968 - 3086952 - G 74 -8 -4.25104 | GGTCGTCGAGCAAAA CGACGT CGGGC ACGTCG GTTCCGATGAGCGCC TERM 1651 3087206 - 3087155 - G 72 -13.7 -3.06796 | gap 3, opp_overlap 3087168 CCGGACTTCACCGAA CCGCCGCCGCCCATCCCGGCGCAGCC GGC GGTCACGCCGG--CGG-CGGCAGCGG CCAGCGCGAGGAATT ugpE 3088073 - 3087246 - | putative sn-glycerol-3-phosphate transport integral membrane protein ABC transporter TERM 1652 3087770 - 3087756 - G 75 -3.4 -4.78107 | overlap 3087735 3087758 GATGATCACCAAAAA CACCGC CGT GCGGCC CGGGAACCGGACAAA TERM 1653 3087768 - 3087758 - G 70 -8.2 -4.00443 | overlap 3087735 3087756 TGATCACCAAAAACA CCGC CGT GCGG CCCGGGAACCGGACA ugpA 3088981 - 3088070 - | putative sn-glycerol-3-phosphate transport integral membrane protein ABC transporter TERM 1654 3088352 - 3088310 - G 83 -4.1 -5.20333 | gap 2, opp_overlap 3088340, overlap 3088351 GATCGACAAGAAAAA CGTGGTCGGCCGCAGCTGCGG CAA CAGCA-CT-CGACGGAACACG GCCCACCGGCTGGCG TERM 1655 3088522 - 3088508 - G 82 -11.4 -4.08767 | CGCATCCTGGTAAAA GTCGGG CAC CCCGAC CCCGATCCGGCGCAA dinF 3090387 - 3089068 - | putative DNA-damage-inducible protein F TERM 1656 3090077 - 3090045 - G 74 -15.5 -2.62616 | opp_overlap 3090033, overlap 3090029 CGATCGCCGACACCA GCGGCGTCGCGGTGG CTT CCACCACGACGACGA CCAACGCGCCCAGAC JTY_2852 3091404 - 3090394 - | hypothetical protein rbfA 3091930 - 3091379 - | ribosome-binding factor A infB 3094632 - 3091930 - | translation initiation factor IF-2 TERM 1657 3092595 - 3092639 + g 72 -12 -3.53444 | gap 1, overlap 3092596 TCCGCTTGCGTGAGC GCGCCGCCAGGGCGTTGCGCT TGCG AGCGCTACGCCG-GTCGGCGA TTTGGCGGGCGATAC TERM 1658 3092596 - 3092638 + g 75 -15.5 -2.71924 | gap 1, overlap 3092595 CCGCTTGCGTGAGCG CGCCGCCAGGGCGTTGCGCT TGCG AGCGCTACGCCG-GTCGGCG ATTTGGCGGGCGATA JTY_2855 3095017 - 3094718 - | hypothetical protein nusA 3096187 - 3095144 - | transcription elongation factor JTY_2857 3096735 - 3096184 - | hypothetical protein JTY_2858 3096930 - 3097475 + | putative transmembrane alanine rich protein JTY_2859 3097472 - 3097960 + | hypothetical alanine rich protein proS 3099709 - 3097961 - | prolyl-tRNA synthetase efpA 3101390 - 3099798 - | putative integral membrane efflux protein cysG 3102630 - 3101413 - | putative siroheme synthase TERM 1659 3102126 - 3102087 - G 77 -16.4 -2.70932 | CGGCCTGGGCAAGCA GCCGGCGACCGCGAACCG TGAT CAGTTCGGGATCGCCGGG ACCGCCGCCGACCAA TERM 1660 3102960 - 3102922 - R 70 -11.6 -3.17075 | opp_overlap 3102936 TGGCCGCGAATGTAA CGCCACTGCGAATTTCCG GCC CGGCTTTTCGCAGTGCCG TTACGCTCGTGGAGT cobB 3104334 - 3102961 - | cobyrinic acid a,c-diamide synthase TERM 1661 3103225 - 3103209 - G 74 -10.1 -3.81146 | overlap 3103210 GCGCCGAATCAACAA CCGCGAC GGC GTCGCGA TAACCCAGCTTGAGA cobO 3104957 - 3104334 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 1662 3104848 - 3104795 - G 70 -10.9 -3.53019 | opp_overlap 3104836 3104837, overlap 3104793 TGACAAACTGAAACA CCGCGATGTCCAGACCAGCGTTCCA CGCC CGCAACGCCATTCCGAACGCCGCGG TCGATTTTCCTTTGC TERM 1663 3104836 - 3104852 + g 70 -2.1 -4.5852 | opp_overlap 3104795 3104793, overlap 3104837 GCCCGCAACGCCATT CCGAACG CCG CGGTCGA TTTTCCTTTGCCTTC JTY_2865 3106867 - 3104978 - | putative magnesium chelatase JTY_2866 3107334 - 3106864 - | hypothetical protein mqo 3108874 - 3107393 - | malate:quinone oxidoreductase TERM 1664 3109534 - 3109560 + G 76 -15 -3.14132 | opp_overlap 3109533 GGTGGGCCCAACCAG GCCGGCGGCGCC GGC GGCAACGCCGGC TTGATCGGCAACGGC PE_PGRS48 3109081 - 3110874 + | PE-PGRS family protein JTY_2869 3110911 - 3111951 + | hypothetical protein mtr 3111964 - 3113343 + | mycothione reductase nicT 3113443 - 3114561 + | putative nickel-transport integral membrane protein JTY_2872 3114627 - 3114959 + | truncated hydrogenase nickle incorporation protein JTY_2873 3114971 - 3115186 + | truncated hydrogenase nickle incorporation protein JTY_2874 3116118 - 3115342 - | short-chain dehydrogenase aldC 3117482 - 3116115 - | putative aldehyde dehydrogenase TERM 1665 3116493 - 3116478 - G 74 -5.4 -4.54727 | gap 1 TGGTGGAAACCAAAA TCCGCGC CCA GC-CGGA GCCGTACCCCGAAAC JTY_2876 3118405 - 3117479 - | putative amidotransferase glnA4 3119759 - 3118386 - | putative glutamine synthetase TERM 1666 3119908 - 3119863 - R 100 -23.6 -2.78596 | opp_overlap 3119870 3119873, overlap 3119870 3119873 GAGCCGGCGAGTAGA CGCGAAAGAACATGATGGGC GCTGGT GCCCATCATGTTCTTTTGCG CCTACTCGCGCTACA TERM 1667 3119870 - 3119901 + r 100 -18.2 -4.12188 | opp_overlap 3119863 3119870 3119873, overlap 3119873 CGAGTAGACGCGAAA GAACATGATGGGCG CTGG TGCCCATCATGTTC TTTTGCGCCTACTCG TERM 1668 3119901 - 3119870 - R 100 -17.5 -3.64599 | opp_overlap 3119870 3119873, overlap 3119863 3119873 CGAGTAGACGCGAAA GAACATGATGGGC GCTGGT GCCCATCATGTTC TTTTGCGCCTACTCG TERM 1669 3119873 - 3119898 + r 93 -14.1 -4.18506 | opp_overlap 3119870 3119863 3119873, overlap 3119870 GTAGACGCGAAAGAA CATGATGGGCG CTGG TGCCCATCATG TTCTTTTGCGCCTAC TERM 1670 3119898 - 3119873 - R 86 -13.4 -3.95378 | opp_overlap 3119873 3119870, overlap 3119870 3119863 GTAGACGCGAAAGAA CATGATGGGC GCTGGT GCCCATCATG TTCTTTTGCGCCTAC mapB 3120776 - 3119919 - | methionine aminopeptidase TERM 1671 3120107 - 3120138 + g 86 -17.4 -3.30441 | TGATGGTCTCGACAG CGGGCTGGTCGT AGTGCAAG ACGACCAGCCCG TTGTGGAACGTCGTG JTY_2879 3121402 - 3120818 - | hypothetical protein JTY_2880 3121751 - 3122131 + | hypothetical protein JTY_2881 3124024 - 3122213 - | putative penicillin-binding lipoprotein TERM 1672 3123853 - 3123911 + g 78 -10 -4.07568 | overlap 3123812 CGCGCGCCTCGTTGG GGTTGTCGCTGAGCTGGGCGGCGGAGGC GGT GTCACCGATGGCCAGCGCGGCGAAGAAC TTTTCGGCCGCCGGA JTY_2882 3124296 - 3124577 + | hypothetical protein JTY_2883 3124581 - 3124844 + | hypothetical protein JTY_2884 3126071 - 3125217 - | hypothetical protein TERM 1673 3126131 - 3126116 - R 71 -5.4 -4.43477 | GCCACTGAATGAAAA GCTGAC CCCT ATCAGC TTACGGTCACAATAG gcpE 3127290 - 3126127 - | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase JTY_2886 3128521 - 3127307 - | putative transmembrane protein dxr 3129770 - 3128529 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1674 3129282 - 3129231 - G 70 -10.7 -3.56092 | opp_overlap 3129281 GGACCAGCCCCGAAA CGGCCCTCCCGAGGCCGTCAGCA CCAGCT TGGCGACCTCGTCGGGAGTGCCG CCGCGCAGGCACTGG TERM 1675 3129281 - 3129309 + g 70 -13 -3.04144 | opp_overlap 3129231 CCTCGTCGGGAGTGC CGCCGCGCAGGC ACTGG GCCAGCGCGGAG TGTTCGGAGTCGACC JTY_2888 3129897 - 3130154 + | hypothetical protein JTY_2889 3130141 - 3130584 + | hypothetical protein mpb83 3130664 - 3131326 + | cell surface lipoprotein TERM 1676 3131539 - 3131502 - f 81 -14.1 -3.63569 | gap 1, overlap 3131504 3131505 CGAACTGCGCAACAA CACCGCCGGGCTGCTACG GCG CGT-GCAGGCCGGCGAAG ACATCACCATCACTG TERM 1677 3131537 - 3131504 - f 85 -15.3 -3.39556 | gap 1, overlap 3131502 3131505 AACTGCGCAACAACA CCGCCGGGCTGCTACG GCG CGT-GCAGGCCGGCGA AGACATCACCATCAC TERM 1678 3131536 - 3131505 - f 80 -16.6 -2.63252 | gap 1, overlap 3131504 3131502 ACTGCGCAACAACAC CGCCGGGCTGCTACG GCG CGT-GCAGGCCGGCG AAGACATCACCATCA TERM 1679 3132560 - 3132616 + G 70 -11.6 -3.38786 | gap 2, opp_overlap 3132576 GGCGCTTTTCGGCGC CGCCAGCGTGAGATCAGGATCGCCACCG GTT CCGTGACGATCCTG--CTGGCGGTGGCG TTGGTGTTCGATCTG dipZ 3131606 - 3133693 + | putative integral membrane C-type cytochrome biogenesis protein mpb70 3133789 - 3134370 + | major secreted immunogenic protein precursor JTY_2893 3134422 - 3134736 + | possible conserved transmembrane protein JTY_2894 3135630 - 3134767 - | putative integral membrane protein mpb53 3136156 - 3135635 - | soluble secreted antigen JTY_2896 3137436 - 3136342 - | hypothetical protein cdsA 3138379 - 3137459 - | putative integral membrane phosphatidate cytidylyltransferase TERM 1680 3137647 - 3137632 - G 72 -5.4 -4.30576 | gap 1, opp_overlap 3137635, overlap 3137633 3137635 TGGTGAGCACGAAAA GCAC-GC CGA GCAGTGC ACCAATCCACGGCGT frr 3138959 - 3138402 - | ribosome recycling factor TERM 1681 3138537 - 3138557 + g 83 -15.5 -3.54307 | overlap 3138550 GCCTTCCTTACGGAT GCGATGGAG TTC CTCCATCGC TTTGCGACGGATATT pyrH 3139916 - 3139131 - | uridylate kinase TERM 1682 3140053 - 3140025 - H 78 -12.4 -3.68569 | gap 1, opp_overlap 3140023 TTAGTCACGCAACAA CGAGGGGCC-GGC CGAG GCCAGGCCCGTCG ACTATCTCAAGGTGT JTY_2900 3140151 - 3140909 + | putative transcriptional regulatory protein TERM 1683 3140938 - 3140950 + T 70 -10.5 -3.61398 | GTCACTTGACTTGCA CCCCG TCT CGGGG TTGTTCGCCGGCCGG TERM 1684 3140958 - 3140973 + T 70 -11.8 -3.17571 | TCTCGGGGTTGTTCG CCGGCC GGGT GGCCGG TTGCCTTCCGCGCTT TERM 1685 3141002 - 3141016 + T 71 -12.8 -3.06162 | TTCACGGCCACCCGG CCGGGC CAG GCCCGG TCTTACGGTCGGCTC JTY_2901 3142307 - 3140988 - | putative transposase TERM 1686 3141170 - 3141196 + g 75 -9.5 -4.09685 | gap 1 CGTCCCAGCCGATGT CTTGCACATGCC GGCA GGCATG-GCAGG TTTTCGACGATGGGA JTY_2902 3143191 - 3142304 - | putative resolvase JTY_2903 3143190 - 3143609 + | putative transcriptional regulatory protein amiC 3145044 - 3143623 - | amidase tsf 3145866 - 3145051 - | elongation factor rpsB 3146741 - 3145878 - | 30S ribosomal protein S2 TERM 1687 3146375 - 3146415 + g 71 -12.5 -3.30124 | opp_overlap 3146371, overlap 3146376 CCTCGAAGCCACCGG TCTGCTCCATCGCCTCAAG CTC CTTGAGGCGTTGCAGCCGC TTATGCACGGTGGAG TERM 1688 3146376 - 3146414 + g 74 -16 -2.57931 | opp_overlap 3146371, overlap 3146375 CTCGAAGCCACCGGT CTGCTCCATCGCCTCAAG CTC CTTGAGGCGTTGCAGCCG CTTATGCACGGTGGA TERM 1689 3147420 - 3147456 + Gr 100 -21.5 -2.89564 | CACCGTGATCGGCGC GCTGGCGGCCGGGCACC CCG GGTGCCAGGCCGCCGCC TGTCTGCACTGGGGG PPE45 3148779 - 3147553 - | PPE family protein JTY_2907 3147025 - 3147774 + | hypothetical protein TERM 1690 3148432 - 3148408 - Gf 95 -10 -4.56597 | GTTCTGCCCGAAAAA GTTGGTCGCG ACCAG CGCCACCAAC AGCGCGCGGTTGGCA JTY_2909 3149179 - 3150156 + | putative oxidoreductase xerC 3151049 - 3150153 - | site-specific tyrosine recombinase viuB 3151991 - 3151140 - | putative mycobactin utilization protein JTY_2912 3153193 - 3152024 - | hypothetical protein JTY_2913 3154701 - 3153190 - | hypothetical protein TERM 1691 3153894 - 3153864 - G 71 -12.4 -3.28791 | ATCCCCCGCCGACAA GCGCCGCAACGCTG GAA CTGTGGTGCGGCGC CACGAACGGCGGCCG JTY_2914 3155087 - 3154701 - | hypothetical protein fdhD 3156165 - 3155335 - | formate dehydrogenase accessory protein fdhF 3158504 - 3156165 - | putative formate dehydrogenase H JTY_2917 3158867 - 3158562 - | hypothetical protein rnhB 3159715 - 3158921 - | ribonuclease HII lepB 3160613 - 3159729 - | putative signal peptidase I rplS 3161012 - 3160671 - | 50S ribosomal protein L19 lppW 3161387 - 3162331 + | putative alanine rich lipoprotein trmD 3163116 - 3162424 - | tRNA (guanine-(N1)-)-methyltransferase rimM 3163650 - 3163120 - | 16S rRNA processing protein JTY_2924 3163906 - 3163664 - | hypothetical protein rpsP 3164402 - 3163914 - | 30S ribosomal protein S16 TERM 1692 3163966 - 3164007 + g 100 -16.5 -4.56597 | overlap 3163981 AGCGCCGGCGTGTCC GGCTGCTCAGGCTGCGGCG CTGG CTCAGCAGCCTTGGCAGCC TTTTTGGCCGGCGAC JTY_2926 3165029 - 3164586 - | hypothetical protein dacB2 3165098 - 3165973 + | putative D-alanyl-D-alanine carboxypeptidase TERM 1693 3165989 - 3166006 + T 70 -12.7 -2.94356 | opp_overlap 3165987, overlap 3165987 3165980 CACCGCGAGCAGACG TGGGCGC TGGT GCGCCCA TCATGTTCTTTTGCG JTY_2928 3166620 - 3166033 - | putative transcriptional regulatory protein TERM 1694 3166349 - 3166389 + g 70 -11.8 -3.40073 | gap 1, opp_overlap 3166342, overlap 3166360 CGCAAAATCGTCAGC GCCGCCGGAAGCGCCGGCC GATC GGCCGGTATTTC-GGCGAC TTGCTTGGTGAACGT JTY_2929 3168457 - 3166622 - | putative D-amino acid aminohydrolase TERM 1695 3167661 - 3167651 - G 79 -2.4 -5.06414 | opp_overlap 3167657, overlap 3167629 3167653 3167654 GCTGGCCAAGAAAAA CAGC AGC GCGG ACACCGGGTTGTCGA TERM 1696 3168459 - 3168478 + r 78 -6.4 -4.65895 | opp_overlap 3168459 3168457 CGCCAAGCTAACATA GATAGCGA TCAC TCGCAATC TTTTTGGCTGACGCC pknI 3170283 - 3168526 - | putative transmembrane serine/threonine-protein kinase I JTY_2931 3171439 - 3170327 - | hypothetical protein TERM 1697 3171266 - 3171316 + g 76 -14.7 -3.10715 | opp_overlap 3171295 GTGCGCGTCGACCAG CCCG-GGCAGGATCCAGCCGCCGTC AAA GACGGTGTC-GGCTCCTGCCACCGG TTCGGTGCTAATGCG ffh 3173044 - 3171467 - | putative signal recognition particle protein TERM 1698 3172716 - 3172752 + g 70 -13.5 -3.01712 | GTCGTCTTCCCGGAG CCCTGCAGGCCGGCGAG CAT CACGACGGTCGGCGGGG TCTTCGCAAACGCCA JTY_2933 3173122 - 3175002 + | hypothetical alanine and arginine rich protein glnD 3177439 - 3175013 - | PII uridylyl-transferase glnB 3177835 - 3177497 - | putative nitrogen regulatory protein P-II amt 3179265 - 3177832 - | putative ammonium-transport integral membrane protein ftsY 3181010 - 3179742 - | putative cell division protein smc 3184677 - 3181060 - | putative chromosome partition protein TERM 1699 3184036 - 3184068 + g 75 -11.9 -3.75153 | overlap 3184037 TTGGATGGCCGCGGC ACGCTGGGCCGCC TCGGCCT GCCGGCCCAGCGG TTTGAGTTGACGCCG TERM 1700 3184037 - 3184067 + g 76 -15.4 -2.84878 | overlap 3184036 TGGATGGCCGCGGCA CGCTGGGCCGCC TCGGCCT GCCGGCCCAGCG GTTTGAGTTGACGCC acyP 3184970 - 3184689 - | putative acylphosphatase JTY_2940 3185370 - 3184957 - | hypothetical protein fpg 3186341 - 3185472 - | formamidopyrimidine-DNA glycosylase rnc 3187367 - 3186645 - | ribonuclease III TERM 1701 3186703 - 3186713 + g 86 -8.2 -4.74801 | overlap 3186699 3186706 AGGGCTTTCCAAGCG GCCG CCG CGGC TTTTTGCTCGGCTTC TERM 1702 3186706 - 3186725 + g 73 -3.5 -4.61482 | gap 1, overlap 3186699 3186703 GCTTTCCAAGCGGCC GCCGCGGC TTTTT GCT-CGGC TTCTTTTTTGGACCG JTY_2943 3187987 - 3187364 - | hypothetical protein JTY_2944 3188775 - 3188038 - | hypothetical protein tesA 3189014 - 3189799 + | putative thioesterase TERM 1703 3189977 - 3189941 - g 100 -19.4 -3.05022 | gap 1, opp_overlap 3189974 3189976 GGCTTCAGACACACA CGGGGGCGGTGGCGGCC GACC GGTCACC-CCGCCCCCG CCCGGTATGCACCAT JTY_2946 3189786 - 3190097 + | hypothetical protein TERM 1704 3191261 - 3191304 + G 88 -10.3 -4.36914 | opp_overlap 3191281, overlap 3191260 3191263 3191298 TGTCATTTTTGCGCC GT-CCGGCCCGCTGGATGCAA CTGC TTGCCACCAGCGG-CCGGTGC TTTTCTGCGGCACCG TERM 1705 3191263 - 3191301 + G 78 -15.3 -3.1733 | gap 1, opp_overlap 3191281, overlap 3191260 3191261 3191298 TCATTTTTGCGCCGT CCGGCCCGCTGGATGCAA CTGC TTGCCACCAGCGG-CCGG TGCTTTTCTGCGGCA fadD26 3190513 - 3192264 + | acyl-CoA synthetase TERM 1706 3193025 - 3192994 - g 73 -13.8 -3.13522 | gap 1, opp_overlap 3192993 3192989, overlap 3192992 ATGGTTGGAGCAATA GCGGTGGCGCGATGA GCA TCATCGC-CAACCGC CTCTCGTATTTCCTT TERM 1707 3193611 - 3193595 - g 73 -12.3 -3.36273 | CTCTGTCAAGACCAA CCTCGGT CAC ACCGAGG CTGCGGCTGGAATCG ppsA 3192261 - 3197891 + | phenolpthiocerol synthesis type-I polyketide synthase ppsB 3197888 - 3202504 + | phenolpthiocerol synthesis type-I polyketide synthase TERM 1708 3203199 - 3203215 + G 70 -6.5 -4.25104 | overlap 3203196 AAGCGATATGGCGTT GGTGGGT GGA ACCAACC TTTTGCTGAGCCCGG ppsC 3202501 - 3209067 + | phenolpthiocerol synthesis type-I polyketide synthase TERM 1709 3209370 - 3209390 + G 73 -3.9 -4.60041 | overlap 3209366 GGTTTCGTTTCCGAT GTCGACG CGTTCGA CGCCGAC TTTTTCGGAATCACT TERM 1710 3210391 - 3210355 - g 77 -12.2 -3.64703 | gap 1, opp_overlap 3210349 TCGTGCCGACCGAAA GCGCCCCGTGG-CCGGC GGCT GCCGGTCCACGCAGGGC TGCGGTGTCATCGTT TERM 1711 3213191 - 3213150 - g 78 -14.3 -3.53012 | GCGGCTTCCTTGAAA GGGCTGGTGCGGGTGCTCG CCTT CGAGCACCCGGACATGCGC ACCACCCTGGTCGAT ppsD 3209064 - 3214547 + | phenolpthiocerol synthesis type-I polyketide synthase TERM 1712 3215981 - 3215943 - g 83 -15.8 -3.53012 | TGCTCTCGGCGCAAA CGGCCGCGGCGCTCGGCG AGT CGCGGACCGCCCTGGCCG CGGCGCTAGAAACGC ppsE 3214553 - 3219019 + | phenolpthiocerol synthesis type-I polyketide synthase TERM 1713 3219399 - 3219371 - g 76 -14.6 -3.18264 | gap 1, overlap 3219372 3219387 3219388 GTGGGGACTGAGCAA GTCCG-CGGCGCG CAAA CGCGCCGCCGAAC TGCTCGAGCAATTCA TERM 1714 3219397 - 3219372 - g 77 -16.1 -2.50816 | overlap 3219371 3219387 3219388 TGGGGACTGAGCAAG TCCGCGGCGCG CAAA CGCGCCGCCGA ACTGCTCGAGCAATT drrA 3219030 - 3220025 + | putative daunorubicin-DIM-transport ATP-binding protein ABC transporter drrB 3220022 - 3220891 + | putative daunorubicin-DIM-transport integral membrane protein ABC transporter drrC 3220888 - 3221718 + | putative daunorubicin-DIM-transport integral membrane protein ABC transporter papA5 3221765 - 3223033 + | acyltransferase mas 3229531 - 3223196 - | putative multifunctional mycocerosic acid synthase membrane-associated TERM 1715 3224094 - 3224122 + g 70 -10.3 -3.66654 | gap 1, overlap 3224084 3224093 ATGTCGGCCCCAGCC GCGC-GCAGGCC TTCGAT GGTCTGCCGCGC TTTGGGGTTGGGCTG TERM 1716 3224825 - 3224860 + g 74 -15.5 -2.55351 | overlap 3224824 CGCCTGCCCCACACC GCCGGTGGCGGAGTG AATCAA CACTTTGTCACCGGC CTTGATCTGAGCCAG TERM 1717 3225503 - 3225523 + g 70 -11.1 -3.5241 | opp_overlap 3225498, overlap 3225502 TAGCAGACCACGCAG GCCGGCCTG CTC CAGGTTGGC TCTTTCTCCCGAGTC TERM 1718 3229194 - 3229165 - G 82 -6.3 -4.7373 | gap 1, overlap 3229167 TCAGCCCAGTAAAAA CGGCCGTCGAGGAC CCG GCCAACGAC-GCCG GATCCAGACCAGCAT TERM 1719 3231431 - 3231402 - g 73 -4.1 -4.59773 | overlap 3231403 GGCTATTGGCAAAAA CCCGACGAGAGTG AGCG CACGTTCGGCGGA AAGATTGTCACCCCT fadD28 3230151 - 3231893 + | acyl-CoA synthetase TERM 1720 3231951 - 3231939 - g 72 -4.8 -4.57073 | TATCCGTTTGAAAAA GTCC TCCCC GGAC TGCCGCGCCACCATC TERM 1721 3232686 - 3232698 + G 71 -3.3 -4.63932 | overlap 3232680 3232677 GGGACACGATTGGGG AACCG ATT CGGTA TTTTCTTGGACGCTG mmpL7 3231886 - 3234648 + | conserved transmembrane transport protein TERM 1722 3236060 - 3236109 + G 80 -15.5 -3.28712 | opp_overlap 3236088, overlap 3236064 GATTTCAACGCCCAA CTGGGCGCCTGGCTGGCGCTGGT GAAC ACCCGCACCCGCCGGGCGCTGGG TTGTGCGCCCACCGA TERM 1723 3236064 - 3236105 + G 93 -19.3 -2.59431 | opp_overlap 3236088, overlap 3236060 TCAACGCCCAACTGG GCGCCTGGCTGGCGCTGGT GAAC ACCCGCACCCGCCGGGCGC TGGGTTGTGCGCCCA JTY_2960 3235280 - 3236521 + | putative transposase for insertion sequence element IS1533 TERM 1724 3236845 - 3236859 + G 70 -4.2 -4.56597 | GATTTCATCACCGCC CGCGAT AAC GTCGTG TTTTTGGGCCCCGCC JTY_2961 3236521 - 3237051 + | putative transposase lppX 3238141 - 3237440 - | putative lipoprotein TERM 1725 3237604 - 3237624 + g 77 -7.5 -4.30576 | GCATCTTGACAGAGC TCGCGGGGA TGG TCCCGGTGA TTTTGGTGGTCGAAA TERM 1726 3238111 - 3238126 + g 70 -6 -4.24294 | opp_overlap 3238110 3238111 3238108 GCACCACCAGAACAG CGGACG TCAC CGCCCG TTTTCCATCATTCAT pks1 3244828 - 3238490 - | putative polyketide synthase TERM 1727 3238743 - 3238704 - G 70 -9.8 -3.63895 | GTTAATGAGTCGAAA CCGAGGTCGCCGAATTCG GTGT CGGGGTCGACGTCCTCGG CGGAGGGCCTACCCA TERM 1728 3241296 - 3241273 - G 83 -14.6 -3.65529 | AGACGTCCACGGAAA TCGCATCCGC GCCC GCGGACGCGA AGCGGGCCCGCACCC TERM 1729 3241885 - 3241875 - G 79 -8.2 -4.43189 | overlap 3241876 ACCAACTCCACAAAA CCCG CCC CGGG GAACAGCACCACCCC TERM 1730 3244204 - 3244185 - G 74 -10 -3.7614 | AACGACGACGAACAA GCGGTATC CACT GACACCGC CGGGCCCTGCAGCCC fadD22 3246942 - 3244825 - | acyl-CoA synthetase JTY_2965 3247558 - 3246959 - | hypothetical protein fadD29 3249443 - 3247584 - | acyl-CoA synthetase JTY_2967 3251236 - 3250091 - | putative oxidoreductase JTY_2968 3251429 - 3252241 + | putative methyltransferase JTY_2969 3252267 - 3253523 + | hypothetical protein JTY_2970 3254379 - 3253654 - | hypothetical protein JTY_2971 3255533 - 3254568 - | hypothetical protein TERM 1731 3254972 - 3254958 - G 85 -7.8 -4.72272 | GGCCGCCACGAAAAA GTCGAC CTC GCCGAC CGCGTCCCCGGCGGC JTY_2972 3255656 - 3256387 + | hypothetical protein JTY_2973 3256458 - 3257285 + | putative glycosyl transferase JTY_2974 3258989 - 3257889 - | putative glycosyl transferase JTY_2975 3259827 - 3259090 - | putative methyltransferase TERM 1732 3259353 - 3259375 + g 71 -3.4 -4.59853 | opp_overlap 3259350, overlap 3259334 CGCTATCTAAGATGG CGAAGATCTT GCC AGGGTATTCG TTTTTGAGGCGTTGA JTY_2976 3260190 - 3259942 - | hypothetical protein JTY_2977 3260272 - 3260661 + | putative transposase JTY_2978 3262111 - 3260762 - | putative glycosyl transferase JTY_2979 3262225 - 3263445 + | putative integral membrane protein purU 3263518 - 3264450 + | putative formyltetrahydrofolate deformylase TERM 1733 3265297 - 3265327 + T 73 -13.3 -3.18728 | opp_overlap 3265296 AAGGCCTCACACGAT CGGACCTAGTCCC GCAAA GGAGCTAGGTCCG TTCGGTGTTGAGCCT coaD 3265804 - 3265319 - | phosphopantetheine adenylyltransferase TERM 1734 3265477 - 3265466 - G 81 -5.8 -4.72272 | GGTCGCGACGAAAAA GGTG TCCA CACC GGCAATGTGTTTGTT TERM 1735 3265637 - 3265580 - G 73 -9.2 -3.92602 | gap 2, opp_overlap 3265580 3265591 3265592 3265594, overlap 3265592 3265596 GCAAGACCTGACAAA GTCGACCACCAAGCCATGCCCGACCTGC ACGC GCAGATTGGGCA-GG-TGCGTTGTCGAC TCCTTGACCATCGCG TERM 1736 3265930 - 3265907 - R 72 -4.5 -4.57837 | overlap 3265908 ACACGTTGGCAAAAA GCCGTTCGG CCAGTT CCAAACGGG TGTCGCCGTAAACAC JTY_2982 3266456 - 3265890 - | putative methyltransferase TERM 1737 3266170 - 3266116 - G 79 -16.3 -2.9155 | gap 1, overlap 3266111 TCGGCCAACACCAGA TCCACCGGGGACGTGGTCCCGGCCGC CACG ACGGCCGCCACCGCG-CCCCGGCGCA GCGTCGCACCGGAGA pca 3270035 - 3266652 - | pyruvate carboxylase JTY_2984 3270692 - 3270060 - | putative integral membrane protein JTY_2985 3271465 - 3270698 - | putative membrane or secreted protein lipN 3272692 - 3271562 - | putative lipase/esterase TERM 1738 3272310 - 3272281 - G 83 -15 -3.6422 | overlap 3272279 CACCGTGGTAAAAGA CCAGCAGCGGCG TGGCGC CACCGCCGCTGG GGCGGTAGTGCCGCG JTY_2987 3272923 - 3273093 + | hypothetical protein JTY_2988 3273090 - 3273938 + | putative oxidoreductase JTY_2989 3274725 - 3274012 - | putative membrane or exported protein recG 3276935 - 3274722 - | putative ATP-dependent DNA helicase JTY_2991 3278599 - 3276938 - | hypothetical alanine rich protein TERM 1739 3278227 - 3278198 - G 73 -13.5 -3.21747 | overlap 3278216 CGACGCGACGACCAA CTCGACGCCGCGC CACA ACGCGGCCCCGAG GGCGTTGGCGTCGAC ung 3279741 - 3279058 - | uracil-DNA glycosylase thiL 3280775 - 3279774 - | thiamine monophosphate kinase TERM 1740 3280786 - 3280798 + r 70 -10.5 -3.61894 | overlap 3280790 GTCACGCGACTTGCA CCCCG TCT CGGGG TTGTTCGGCAGCCTT JTY_2994 3282151 - 3280772 - | putative transposase JTY_2995 3282735 - 3282151 - | putative resolvase TERM 1741 3282528 - 3282543 + g 73 -9 -3.96148 | TCACCCGCGCGACCT GCCGAT CCAG ATCGGC TTTCTGATCGGCCGA TERM 1742 3283341 - 3283376 + G 72 -14 -2.99471 | gap 1, opp_overlap 3283330 3283331 AAAACCCGGACGAGC CAGGCCGGTCCAC-CTG GTA CACCGTGGACCGGCCGG TGTATGTGGCGCTGA JTY_2996 3282947 - 3283492 + | putative secreted protein ddl 3285081 - 3283960 - | D-alanyl-alanine synthetase A gpsA 3286163 - 3285159 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase JTY_2999 3286282 - 3286926 + | hypothetical alanine rich protein ppk 3287018 - 3289246 + | polyphosphate kinase TERM 1743 3289347 - 3289374 + G 82 -15.6 -3.48276 | gap 1, opp_overlap 3289343 TCGATCCAGAACTCG TCC-GCCCGCCGG CGC TCGGCGGGCCGGA TTGTGTACGCCGCCG mutT1 3289329 - 3290282 + | putative hydrolase TERM 1744 3290283 - 3290332 + T 86 -16 -3.11218 | gap 1, opp_overlap 3290285 3290287 AACGTGCGGGCCTAA CACACGGATACCCTTCGTCAC ATTGCCACC GTG-CAAAGGGTATCCGTGTG TCTTGACCTATTTGC TERM 1745 3290330 - 3290285 - T 88 -17.1 -3.01712 | gap 1, opp_overlap 3290283, overlap 3290287 CGTGCGGGCCTAACA CACGGATACCCTTCGTCACATT GCC ACCGTG-CAAAGGGTATCCGTG TGTCTTGACCTATTT TERM 1746 3290328 - 3290287 - T 75 -13.9 -3.06696 | gap 1, opp_overlap 3290283, overlap 3290285 TGCGGGCCTAACACA CGGATACCCTTCGTCACATT GCC ACCGTG-CAAAGGGTATCCG TGTGTCTTGACCTAT hupB 3290957 - 3290340 - | putative DNA-binding protein HU homolog TERM 1747 3290385 - 3290409 + g 77 -10 -3.90744 | gap 1, overlap 3290386 CTTGGCGGGAGCCTT GGTAGCCGGCC GCTT GGCC-GCTGCC TTCTTTGCCGGCGCC leuD 3291766 - 3291170 - | isopropylmalate isomerase small subunit TERM 1748 3291580 - 3291558 - G 70 -11.2 -3.53224 | overlap 3291574 GATCCGGTGCCGAAA TCGGGCCCGG CAA CCAGGACCGA ACCCCGGTCAAAGGG leuC 3293212 - 3291791 - | isopropylmalate dehydratase large subunit JTY_3005 3293284 - 3293985 + | putative transcriptional regulatory protein JTY_3006 3294856 - 3293996 - | hypothetical protein JTY_3007 3295119 - 3295610 + | hypothetical protein TERM 1749 3295627 - 3295668 + T 100 -24.1 -2.79133 | gap 1, opp_overlap 3295627 3295634, overlap 3295634 TGCCCGGCGAGCAGA CGCAAAATCGCCC-ATTTCG AGA CGAAATTGGGCGATTTTGCG TCTGCTCGGCAGTTG TERM 1750 3295668 - 3295627 - T 100 -24.1 -2.78384 | gap 1, opp_overlap 3295627 3295634, overlap 3295634 TGCCCGGCGAGCAGA CGCAAAATCGCCC-ATTTCG AGA CGAAATTGGGCGATTTTGCG TCTGCTCGGCAGTTG TERM 1751 3295661 - 3295634 - T 100 -13.6 -4.24948 | gap 1, opp_overlap 3295634 3295627, overlap 3295627 CGAGCAGACGCAAAA TCGCCC-ATTTCG AGA CGAAATTGGGCGA TTTTGCGTCTGCTCG TERM 1752 3295634 - 3295661 + T 100 -13.6 -4.24948 | gap 1, opp_overlap 3295627 3295634, overlap 3295627 CGAGCAGACGCAAAA TCGCCC-ATTTCG AGA CGAAATTGGGCGA TTTTGCGTCTGCTCG gltx 3297414 - 3295942 - | glutamyl-tRNA synthetase JTY_3009 3298130 - 3297411 - | putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase TERM 1753 3298734 - 3298752 + Gr 72 -13.8 -2.70932 | overlap 3298740 GTGTCTTCCTGTTTC TCGGCGGC ATG GCCGCCGG TGGTTGCAACAGCGC TERM 1754 3299257 - 3299278 + Gr 79 -9.3 -4.11183 | overlap 3299255 TCCCGTCCGCCTGAT CGCCGCTGC CGCC GCGGCGACG TTGTTTCTGCTCGCG leuB 3300605 - 3299595 - | 3-isopropylmalate dehydrogenase JTY_3010 3298406 - 3299743 + | putative integral membrane protein serA1 3302206 - 3300620 - | putative D-3-phosphoglycerate dehydrogenase TERM 1755 3301577 - 3301590 + g 70 -5.9 -4.19817 | CTTGTCGATCAGTCC CGCCG TCTC CGGTG TTTTCGGTAGGTGCA TERM 1756 3302423 - 3302433 + G 75 -4.6 -4.58283 | TGCATCCGCTTGCTT TGGC GTC GCCG TTTTTCGCCGAATTC JTY_3013 3302236 - 3303678 + | putative alanine rich dehydrogenase JTY_3015 3304565 - 3304362 - | hypothetical protein JTY_3014 3303952 - 3304413 + | hypothetical protein lppY 3304739 - 3305704 + | putative lipoprotein JTY_3017 3305749 - 3306408 + | putative transmembrane protein ilvC 3307723 - 3306722 - | ketol-acid reductoisomerase ilvN 3308267 - 3307761 - | acetolactate synthase 3 regulatory subunit ilvB1 3310123 - 3308267 - | acetolactate synthase 1 catalytic subunit TERM 1757 3308869 - 3308888 + g 89 -10.6 -4.19258 | opp_overlap 3308858 CGAAGACGGCGTCCG GCCCGGCG ATCT CGCCGAGC TTTTCGATCACGTAT TERM 1758 3310204 - 3310176 - H 100 -8.9 -5.55769 | gap 1, opp_overlap 3310197 GTGGACAAGAAAAAA CCCTCGC-CAGC TCAGCT GCTGCACGAGGG TCGCGTTGGTGCTCG cfp6 3310485 - 3310823 + | low molecular weight protein antigen 6 JTY_3022 3311669 - 3310830 - | hypothetical protein TERM 1759 3311779 - 3311765 - H 79 -8.5 -4.2717 | ACCAGCCCACCAAAA GGCCC CAATT GGGCC GCCATGCCGACAGTG lppZ 3311846 - 3312967 + | putative lipoprotein JTY_3024 3313587 - 3312973 - | putative oxidoreductase JTY_3025 3313781 - 3314404 + | hypothetical protein gatB 3315930 - 3314401 - | aspartyl/glutamyl-tRNA amidotransferase subunit B pfkA 3316991 - 3315960 - | 6-phosphofructokinase TERM 1760 3317034 - 3317075 + r 72 -13.8 -2.78816 | gap 1, opp_overlap 3317034 3317036 3317041, overlap 3317036 3317038 3317040 CCTGGCGCGAGCAGA CACAGAATCGCA-CGGGCG AGGGG CGCCGGATGCGAGTCTGTG TCTGCTCGCCGCTAA TERM 1761 3317075 - 3317034 - R 72 -13.8 -2.78384 | gap 1, opp_overlap 3317034 3317036 3317038 3317040, overlap 3317036 3317041 CCTGGCGCGAGCAGA CACAGAATCGCA-CGGGCG AGGGG CGCCGGATGCGAGTCTGTG TCTGCTCGCCGCTAA gatA 3318571 - 3317087 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 3318867 - 3318568 - | aspartyl/glutamyl-tRNA amidotransferase subunit C JTY_3030 3318952 - 3319608 + | hypothetical protein TERM 1762 3319639 - 3319686 + T 83 -15.6 -3.14344 | opp_overlap 3319628 3319629, overlap 3319644 CCAAGGTTCGCCGAG CGTAACGCCACTGCGAAAAACC GCGC GGAGATTCGCAGTGCCGTTACG TTCGTGACGCGGGTC ligA 3321757 - 3319682 - | NAD-dependent DNA ligase TERM 1763 3320445 - 3320407 - G 83 -12.2 -4.11216 | TGGCGACGTGGAAAA CCCGCTCCCGCAGTTGCC CCG GGCAGCCGCGGGCGTTGG GGCAACGGATGTCGG TERM 1764 3321385 - 3321369 - G 74 -10.1 -3.83026 | opp_overlap 3321375, overlap 3321373 TCGCGGTAGACCAAA GACAGCG CGA CGCCGTC GATCTTGAGCTCACA JTY_3032 3322801 - 3321788 - | hypothetical protein lpqA 3322895 - 3323524 + | putative lipoprotein esxQ 3323989 - 3323627 - | putative EsaT-6 like protein 8 PPE46 3325389 - 3324076 - | PPE family protein TERM 1765 3325471 - 3325415 - R 74 -14.5 -2.61274 | gap 3, overlap 3325414 GCTAGCGGAATCAAT GTGCGGCGGCCAGCC-GTGCGGTCAACG CCTC CACCG-CCGCACTGGC-GGCCGCCAAAC CCTCAGGAACCACGC PE27A 3325496 - 3325410 - | PE family protein esxR 3326082 - 3325792 - | putative secreted EsaT-6 like protein 9 esxS 3326410 - 3326117 - | PE family protein PPE47 3327764 - 3326457 - | PPE family protein TERM 1766 3326904 - 3326894 - G 70 -2.6 -4.62302 | GAATAGCGCCAAAAA TATT CGA AATA ATCCAACCAATACTG PE29 3328075 - 3327761 - | PE family protein JTY_3041 3329704 - 3328457 - | putative transposase trmU 3330970 - 3329867 - | tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase iscS 3332148 - 3330967 - | putative cysteine desulfurase JTY_3044 3333159 - 3332245 - | hypothetical protein JTY_3045 3333896 - 3333156 - | hypothetical protein TERM 1767 3334103 - 3334131 + r 76 -8.8 -4.12188 | gap 1 GTGAGCAGGCGCCAA GGCCCC-CCACGC CTCG GCGTGTCGGGGTC TTTTGCGACTGCTCG fixB 3335113 - 3334157 - | putative electron transfer flavoprotein alpha-subunit fixA 3335952 - 3335152 - | putative electron transfer flavoprotein beta-subunit JTY_3048 3336183 - 3337007 + | hypothetical protein JTY_3049 3337004 - 3338584 + | hypothetical protein JTY_3050 3338616 - 3339860 + | putative transferase JTY_3051 3339894 - 3340283 + | hypothetical protein TERM 1768 3340352 - 3340313 - f 74 -14.2 -2.57132 | overlap 3340312 CGTGCTGGGCACAAC CCGACTCGGCCTGGAGGC GCCT GCATCCAAGCCGCACCGG CGCACAATTATCTGC JTY_3052 3340462 - 3341010 + | hypothetical protein JTY_3053 3342003 - 3341101 - | putative transferase JTY_3054 3342461 - 3343543 + | hypothetical protein TB22.2 3344223 - 3343540 - | putative secreted protein JTY_3056 3345372 - 3344296 - | hypothetical protein JTY_3057 3346490 - 3345507 - | hypothetical protein echA17 3347265 - 3346501 - | enoyl-CoA hydratase JTY_3059 3348140 - 3347274 - | hypothetical protein JTY_3060 3349000 - 3348137 - | putative ATP-binding protein ABC transporter serB2 3350244 - 3349015 - | putative phosphoserine phosphatase ctaD 3352003 - 3350282 - | putative cytochrome c oxidase polypeptide I TERM 1769 3351010 - 3350984 - G 78 -5.9 -4.62783 | gap 1, overlap 3350985 3350986 GATCCAGTTGAAAAA CTTGATCCCGGT CGGC ACCGCGATC-AG ATACGTCATGAAAGA fecB 3352218 - 3353297 + | putative FeIII-dicitrate-binding periplasmic lipoprotein adhC 3353367 - 3354407 + | putative NADP-dependent alcohol dehydrogenase JTY_3065 3354770 - 3354396 - | hypothetical protein TERM 1770 3354466 - 3354504 + g 82 -11.6 -4.13767 | overlap 3354465 ACGCCGGCCAGCGGC CATCCGGCGGCGGCCAGG ATG CCTGCCACCCGTTGGATG TTTTCCGGTCCGGCG JTY_3066 3355388 - 3355104 - | hypothetical protein nrdF2 3356460 - 3355486 - | ribonucleoside-diphosphate reductase subunit beta JTY_3068 3358165 - 3356591 - | putative monooxygenase TERM 1771 3357992 - 3358006 + g 81 -11.4 -3.91144 | GTCGCGCCAGGTGCC GCCGAC GTC GTCGGC TTTCTCCAATATGAC JTY_3069 3359039 - 3358299 - | putative transcriptional regulatory protein nrdE 3361248 - 3359167 - | ribonucleoside-diphosphate reductase subunit alpha TERM 1772 3360801 - 3360779 - G 95 -5.4 -5.27477 | opp_overlap 3360781 3360783, overlap 3360781 ACGCGAAGCAAAAAA CAGCTCACGG GCT CCCCGCGCTG CTTCTTGCCAGAATT nrdI 3361766 - 3361314 - | ribonucleotide reductase stimulatory protein nrdH 3362040 - 3361801 - | putative glutaredoxin electron transport component of nrdEF JTY_3073 3362386 - 3362018 - | hypothetical protein JTY_3074 3363057 - 3362503 - | hypothetical protein JTY_3075 3363149 - 3363763 + | putative transcriptional regulatory protein dinP 3363773 - 3364813 + | DNA polymerase IV JTY_3077 3365730 - 3364867 - | short chain dehydrogenase JTY_3078 3366444 - 3365794 - | putative transcriptional regulatory protein cyp136 3366560 - 3368038 + | putative cytochrome P450 136 JTY_3080 3370281 - 3368809 - | putative transcriptional regulatory protein TERM 1773 3370327 - 3370368 + r 100 -24.1 -2.78384 | gap 1, opp_overlap 3370327 3370334, overlap 3370334 AAGGGCGCGAGCAGA CGCAGAATCGCC-CAAAATC CAA GATTTTGAGGCGATTCTGCG TCTGCTCGCGCAACC TERM 1774 3370368 - 3370327 - R 100 -24.1 -2.78715 | gap 1, opp_overlap 3370327 3370334, overlap 3370334 AAGGGCGCGAGCAGA CGCAGAATCGCC-CAAAATC CAA GATTTTGAGGCGATTCTGCG TCTGCTCGCGCAACC TERM 1775 3370361 - 3370334 - R 74 -12.2 -3.40299 | gap 1, opp_overlap 3370327 3370334, overlap 3370327 CGAGCAGACGCAGAA TCGCC-CAAAATC CAA GATTTTGAGGCGA TTCTGCGTCTGCTCG TERM 1776 3370334 - 3370361 + r 74 -12.2 -3.40299 | gap 1, opp_overlap 3370334 3370327, overlap 3370327 CGAGCAGACGCAGAA TCGCC-CAAAATC CAA GATTTTGAGGCGA TTCTGCGTCTGCTCG fadE22 3372563 - 3370398 - | putative acyl-CoA dehydrogenase TERM 1777 3371712 - 3371688 - G 70 -11.3 -3.56643 | TGCATAGGCCGGAAA CGCCAGGGCCG CAG CGACCGCGGCG GCCAGCCGAAACTGC TERM 1778 3372460 - 3372438 - G 71 -12.7 -3.28924 | gap 1 GAGGTTCTGCCAGAA CGGCGGGCGG GCGT CC-CCCGCCG CGTCCAGTGATGCAC TERM 1779 3373507 - 3373534 + G 81 -14.8 -3.57144 | opp_overlap 3373524 ACGGCGAGGCGATCG CGCTGTGCCCGG ACAA CCGGCCGCAGCG TTTCCAGGTCACCGC ligB 3372720 - 3374243 + | ATP-dependent DNA ligase TERM 1780 3375350 - 3375375 + G 74 -9.8 -3.87815 | gap 1 GTTCATGAAGGTCGG CACC-ATCGCG CTTCT CGCGATCGGTG TTTGTGCGGCTCACC cstA 3374379 - 3376655 + | putative carbon starvation protein A homolog JTY_3084 3377386 - 3376961 - | putative integral membrane protein TERM 1781 3377470 - 3377522 + H 100 -21.8 -3.28912 | gap 1, overlap 3377462 3377472 CACGTGTGGACGCAC GA-GCCTCCTTTGTGTACATTTGTA CATG TACAAATGTACACAAAGGAGGGGTC TTGATCTACCTATAC TERM 1782 3377472 - 3377519 + H 100 -24.6 -2.52023 | overlap 3377462 3377470 CGTGTGGACGCACGA GCCTCCTTTGTGTACATTTGTA CATG TACAAATGTACACAAAGGAGGG GTCTTGATCTACCTA TERM 1783 3377720 - 3377753 + G 77 -11 -3.89346 | overlap 3377714 GCTGTGGTCGGCAAT CGGTACGGCCGCCA TTGTGC TGGTCGCCGTACTG TTTCTCGGCTCGCCG mmr 3377523 - 3377846 + | multidrug-transport integral membrane protein TERM 1784 3378289 - 3378301 + G 77 -6.9 -4.56775 | overlap 3378275 TCGACGAGCCGCCAA CGCGG TCA CCGTG TTTTTCGACGGCGCT JTY_3086 3377843 - 3378451 + | putative transcriptional regulatory protein JTY_3087 3378564 - 3378974 + | hypothetical protein pgmA 3380758 - 3379115 - | phosphoglucomutase TERM 1785 3379343 - 3379378 + g 79 -11.1 -3.96624 | gap 1 GGCCAACTCGGTGGC GCTCACCTGGTC-GGC CGACA GCCTGGCCAGGCGGGC TTTCTGCTCCCGATC TERM 1786 3380242 - 3380273 + g 73 -14.4 -3.10905 | gap 1, overlap 3380249 3380267 3380268 CACGCTTGGCTATTG CGGTGGTCGCAGCGG TGT CCGCCG-GGCCACCG TTGGGTGGGTTGTAC JTY_3089 3380828 - 3381226 + | putative transmembrane protein JTY_3090 3381223 - 3381603 + | putative integral membrane protein JTY_3091 3381600 - 3382709 + | hypothetical protein JTY_3092 3383458 - 3382934 - | hypothetical protein JTY_3093 3383821 - 3383465 - | hypothetical protein JTY_3094 3383915 - 3385189 + | hypothetical protein JTY_3095 3386109 - 3385186 - | hypothetical protein JTY_3096 3386208 - 3386684 + | hypothetical protein JTY_3097 3386677 - 3388488 + | putative hydrolase hab 3388489 - 3388890 + | putative hydroxylaminobenzene mutase JTY_3099 3389733 - 3388906 - | hypothetical protein TERM 1787 3389688 - 3389653 - G 75 -11.8 -3.68506 | gap 1, opp_overlap 3389681, overlap 3389641 GAACAGCGACTCAAA CCCGCGGTGCTCGAGTG CCG CACCC-AGCTCCGCCGG GCCGATTCCCTCGTC pknK 3393124 - 3389792 - | putative serine/threonine-protein kinase transcriptional regulatory protein TERM 1788 3391713 - 3391698 - G 71 -9 -3.78775 | TTGTCCAGCAGGAAA CCCAAG GCAG CTTGGG TGCGGCTGTCGGACA TERM 1789 3392072 - 3392120 + g 72 -12.9 -3.15249 | overlap 3392075 GCGCAGGATGTCGGT GAGCCGGCTGCGGGTGACCAGCG AGC CGGTGGGCACCGACGGCCGGTAC TTGGTCGCGGGTGTC TERM 1790 3392075 - 3392117 + g 75 -15.4 -2.78018 | overlap 3392072 CAGGATGTCGGTGAG CCGGCTGCGGGTGACCAGCG AGC CGGTGGGCACCGACGGCCGG TACTTGGTCGCGGGT TERM 1791 3393360 - 3393384 + G 95 -19.3 -2.85351 | CGGCGCGCCATTGGG GCGTGAGCGCG TCG CGCGCTCGCGC TATCCTGTCGAGCCG TERM 1792 3393819 - 3393848 + G 73 -11.3 -3.6682 | gap 1, overlap 3393820 CGTTTGCCGCCGTGT GGACGCCGGCGCCG TTC CGGCGCC-GCGGCA TTTACCTAGATCGCC TERM 1793 3393820 - 3393847 + G 72 -14.8 -2.79878 | gap 1, overlap 3393819 GTTTGCCGCCGTGTG GACGCCGGCGCCG TTC CGGCGCC-GCGGC ATTTACCTAGATCGC JTY_3101 3393176 - 3394414 + | hypothetical protein virS 3395562 - 3394540 - | virulence-regulating transcriptional regulator TERM 1794 3395078 - 3395067 - G 77 -7.2 -4.5442 | overlap 3395068 3395069 GTCGGAACGAGAAAA CGCG CGCC CGCG CCTGCGGTCCGCCCA JTY_3103 3395640 - 3397127 + | putative monooxygenase TERM 1795 3397170 - 3397150 - g 73 -3.9 -4.58283 | GAACCTGCGCAAAAA CGTCATCCG GTC CGTATTACG TGGTGCCCGGCCACT lipR 3397133 - 3398059 + | putative acetyl-hydrolase/esterase TERM 1796 3398216 - 3398192 - g 85 -13.5 -4.07687 | ACGGGCTGGCCAAAA CCGTGCGCCTG GCT CAAGCGCTCGG CGCGCAGGTGAAGTC TERM 1797 3398666 - 3398630 - g 74 -8.1 -4.25104 | gap 3, overlap 3398631 CCGGCGGCATCAAAA CCGCCGTCGCGCGCAACG CCAC CGT-G-GC-CGACGGCGA GGACCAGCAGACGTT JTY_3105 3398056 - 3398886 + | putative short-chain type dehydrogenase/reductase adhD 3398917 - 3400023 + | putative zinc-type alcohol dehydrogenase TERM 1798 3401257 - 3401278 + G 72 -8.7 -4.07568 | gap 1 GCCGCGGTATCTCGG CCGCTGG-CG CGT CGACCAGTGG TTTTCCACCGGGCAG JTY_3107 3400061 - 3401479 + | hypothetical protein JTY_3108 3401476 - 3402900 + | hypothetical protein fadD13 3402897 - 3404408 + | putative chain-fatty-acid-CoA ligase TERM 1799 3405483 - 3405464 - g 71 -12.1 -3.29854 | opp_overlap 3405463 3405462 3405460, overlap 3405462 AAAACAGTGACAATA GCCGCCG TGGCAG CGGCGGC CGTGTTCTTCTTCTT JTY_3110 3405347 - 3406234 + | hypothetical alanine and valine rich protein TERM 1800 3406808 - 3406759 - g 74 -14.9 -3.05384 | gap 1, opp_overlap 3406791 TTCTCCGCGACGGAA CTCGACGCCGAGGTCGGCTACAAG AAG CTGGTGACCGTCCTCGGCGGCG-G CGGGGGCGCGGGCTT TERM 1801 3407323 - 3407363 + G 84 -14 -3.96327 | gap 1, overlap 3407319 3407304 ATCGTCATCAGCGCC GACGGCGCGACACGCGACG TCAA CGTCGT-TGACGCGGCGTC TTTCTCGTCGGCCAT JTY_3111 3406252 - 3407943 + | hypothetical protein JTY_3112 3408870 - 3407950 - | putative integral membrane protein JTY_3113 3409900 - 3408896 - | putative oxidoreductase TERM 1802 3409048 - 3409011 - G 77 -15.6 -3.06302 | gap 2 ACGACCGCGACGCAA TCGGCACCGGCATCCGCG TAGG CGCGGA-GCCGG-GCCGC CACTCGATCGGGGCT JTY_3114 3411027 - 3409897 - | hypothetical protein JTY_3115 3411109 - 3411585 + | hypothetical transcriptional regulatory protein JTY_3116 3411683 - 3412822 + | hypothetical protein PE_PGRS63 3414227 - 3412914 - | PE-PGRS family protein TERM 1803 3414080 - 3414067 - G 86 -9.5 -4.64861 | TGGGCGGAAAACAAA GCCGC GATC GCGGC TGACACCTCGTCCTC JTY_3118 3414798 - 3414346 - | hypothetical protein TERM 1804 3414598 - 3414584 - G 70 -2.1 -4.67353 | CGACCTACTGAAAAA GACGA GCAGA TCATC AAGGCCGCAATGCGC TERM 1805 3415359 - 3415378 + r 78 -10 -4.00042 | overlap 3415349 AGCGAGAGCGTAGTC GCGCTGAT GTGA ATCGGCGC TTATTTGGTCGCAAC JTY_3119 3416400 - 3415549 - | hypothetical protein smpB 3416919 - 3416437 - | SsrA-binding protein TERM 1806 3416641 - 3416683 + g 72 -14.8 -2.78216 | opp_overlap 3416656, overlap 3416637 GACCAAGGTGTCGAT CTGGCGGCGATGCAACAGCA GTT TGCGGTTGCGTCGCGGCTCG TGGTTGGTCCAGCTG ftsX 3417815 - 3416922 - | putative cell division protein ftsE 3418505 - 3417816 - | putative cell division ATP-binding protein JTY_3123 3418986 - 3418549 - | hypothetical proline-rich protein JTY_3124 3419914 - 3418988 - | putative transmembrane protein prfB 3421040 - 3419904 - | peptide chain release factor 2 TERM 1807 3420090 - 3420107 + g 74 -10.5 -3.79678 | overlap 3420103 GCCGTCGGCCTTCAA CGCGTCG AGCT CGGCGCG TTCTTCTAAGCGCTT TERM 1808 3421927 - 3421953 + G 77 -12.3 -3.66844 | GACCGCGAACCCCGC CCGGGACACCG CCGCA TGGTGTTCCGG TTCTTGACCTCTCCG fprA 3421144 - 3422514 + | putative NADPH:adrenodoxin oxidoreductase agpS 3424098 - 3422515 - | putative alkyldihydroxyacetonephosphate synthase JTY_3128 3424197 - 3424637 + | hypothetical protein TERM 1809 3425868 - 3425826 - g 73 -11.1 -3.64162 | ATTAAGCACGTTAAA GGCCGACCCGCATCTGGAG ATGCA CACCAGGGGCGGGTAAGCC GAACGAACAGTCGAT moaA1 3424786 - 3425865 + | putative molybdenum cofactor biosynthesis protein A moaB1 3425916 - 3426311 + | putative pterin-4-alpha-carbinolamine dehydratase TERM 1810 3426769 - 3426759 - g 70 -2.4 -4.66537 | opp_overlap 3426765 TGCTCCAAGAGAAAA GCGG CGG CCGG TCCGGAGTTTATCGC moaC 3426308 - 3426820 + | molybdenum cofactor biosynthesis protein C moaD1 3426837 - 3427088 + | putative molybdenum cofactor biosynthesis protein D TERM 1811 3427641 - 3427613 - g 73 -9.5 -3.90291 | AGTGGTTCAACGAAA TCCGTGGCCGGAC TCG GCCCGACCAAGAA AAACCCATGATGCTG JTY_3133 3427210 - 3427878 + | putative phosphatase JTY_3134 3427895 - 3428425 + | hypothetical protein JTY_3135 3428587 - 3429834 + | putative transposase moeB2 3429912 - 3431081 + | putative molybdenum cofactor biosynthesis protein cysA3 3431110 - 3432072 + | putative thiosulfate sulfurtransferase JTY_3138 3432450 - 3432920 + | hypothetical protein JTY_3139 3432930 - 3433424 + | hypothetical protein JTY_3140 3433867 - 3434736 + | putative transcriptional regulatory protein PPE49b 3435151 - 3434837 - | PPE family protein PPE49a 3436011 - 3435163 - | PPE family protein JTY_3143 3436482 - 3436168 - | hypothetical protein JTY_3144 3436507 - 3437541 + | hypothetical protein JTY_3145 3437878 - 3437528 - | hypothetical protein JTY_3146 3438541 - 3437960 - | hypothetical protein JTY_3147 3439020 - 3439352 + | hypothetical protein JTY_3148 3440726 - 3439335 - | hypothetical protein JTY_3149 3440911 - 3441909 + | hypothetical protein devS 3443625 - 3441889 - | two component sensor histidine kinase devR 3444275 - 3443622 - | two component transcriptional regulatory protein JTY_3152 3445109 - 3444303 - | hypothetical protein PPE50 3445694 - 3446839 + | PPE family protein TERM 1812 3446976 - 3447001 + F 86 -8.2 -4.55295 | TGTGACTGCGTCTTT CGTCGACACC GCGTCA GGTGCCGGCG TTTCTTTCTCGCGGC TERM 1813 3448045 - 3448015 - g 73 -13.3 -3.24747 | gap 1, overlap 3448011 GCGGCAGACCACCAA CCCGGCCGGCCTGA CCGC TCAGGCCG-CCGCG GTCAGCCAGGCCACC PPE51 3447491 - 3448633 + | PPE family protein TERM 1814 3449243 - 3449279 + G 100 -19.4 -3.01791 | gap 1 GTCGAATCCGACGTG CGCCAGACGCTGGGCCG CGAC CGGCCCGGCGAC-GGCG TCTTGGGCGAGGAGT JTY_3155 3449090 - 3449872 + | putative monophosphatase TERM 1815 3449956 - 3449922 - g 82 -12.8 -3.92178 | ACCATCGCAACCAAA CACTGGCACCGACTGC ACG ACAGCCGGATCCAGTG CGATGTATGTCCACG TERM 1816 3450376 - 3450360 - g 73 -9.4 -3.94002 | GACCAGGGAATCAAA GCCGTC GCGGT GACGGC CGGGTACATGTGTCC pflA 3449892 - 3450980 + | putative pyruvate formate lyase activating protein TERM 1817 3451027 - 3450993 - f 71 -9.5 -3.77953 | gap 1, overlap 3450994 3450996 3451018 3451022 TGAACAACTTAACAA GCACCCCTATCTTACT CCGG AGTAAGATAGGG-TGG TCCGCTATCACCCCG TERM 1818 3451026 - 3450994 - f 70 -13 -2.86049 | gap 1, overlap 3450993 3450996 3451018 3451022 GAACAACTTAACAAG CACCCCTATCTTACT CCGG AGTAAGATAGGG-TG GTCCGCTATCACCCC TERM 1819 3452430 - 3452452 + G 71 -9 -3.87104 | overlap 3452431 GTACCGCGACCTGCG AGCCATCGGC GTC GCCGAGGGCG TTGTTGTCATCTAGA fadE24 3451060 - 3452466 + | putative acyl-CoA dehydrogenase fadE23 3452487 - 3453692 + | putative acyl-CoA dehydrogenase TERM 1820 3453707 - 3453748 + F 84 -17.5 -2.78463 | gap 1, opp_overlap 3453692 3453707 3453714, overlap 3453714 GCCTCGGCGAGCAGA CGTCAAAGCCCCCGAATTTC AGT GAAAT-CGGGGGCTTTTGCG TCTGCTGGCGCCCGT TERM 1821 3453748 - 3453707 - f 78 -15.3 -2.78384 | gap 1, opp_overlap 3453707 3453714, overlap 3453692 3453714 GCCTCGGCGAGCAGA CGTCAAAGCCCCCGAATTTC AGT GAAAT-CGGGGGCTTTTGCG TCTGCTGGCGCCCGT TERM 1822 3453714 - 3453741 + F 100 -15 -4.24948 | gap 1, opp_overlap 3453692 3453707 3453714, overlap 3453707 CGAGCAGACGTCAAA GCCCCCGAATTTC AGT GAAAT-CGGGGGC TTTTGCGTCTGCTGG TERM 1823 3453741 - 3453714 - f 85 -15 -3.64599 | gap 1, opp_overlap 3453714 3453707, overlap 3453692 3453707 CGAGCAGACGTCAAA GCCCCCGAATTTC AGT GAAAT-CGGGGGC TTTTGCGTCTGCTGG fadB4 3453792 - 3454763 + | putative NADPH quinone oxidoreductase JTY_3160 3455243 - 3454815 - | hypothetical protein JTY_3161 3455351 - 3455752 + | putative response regulator PPE52 3457014 - 3455785 - | PPE family protein TERM 1824 3456086 - 3456063 - G 75 -13.9 -3.33261 | CTGGAACTTCCACAA CGGCTTCCG GTGGCG CGGAAGCCG CCGGCTCTGGCGCTC nuoA 3457379 - 3457765 + | NADH dehydrogenase subunit A nuoB 3457774 - 3458328 + | NADH dehydrogenase subunit B nuoC 3458325 - 3459035 + | NADH dehydrogenase subunit C nuoD 3459035 - 3460357 + | NADH dehydrogenase subunit D TERM 1825 3461049 - 3461017 - g 84 -16.9 -3.14344 | CAGCGTCCCGACGAA GGCCAGGGCGGTCCC GGC GCGCCCACCCTGGCC GGGCTGCAGGTGGCA nuoE 3460354 - 3461112 + | NADH dehydrogenase subunit E TERM 1826 3461275 - 3461232 - g 71 -9.6 -3.86015 | gap 1, overlap 3461233 CAGGCGTTGCAGAAA GCCCTGACGATGCCGCCCGAC GAC GT-GATCAGCATCGTCAAGGA TTCCGGGTTACGCGG nuoF 3461109 - 3462446 + | putative NADH dehydrogenase I chain F TERM 1827 3463233 - 3463194 - g 77 -16.4 -2.52464 | gap 1 GCTGCGCGCAACGCA CCGACCA-TCGCCGCGGCA AGG TGCTGCGGCGGCTGGCCGG TGACGACCCGGAAGT nuoG 3462443 - 3464863 + | NADH dehydrogenase subunit G nuoH 3464979 - 3466211 + | NADH dehydrogenase subunit H nuoI 3466204 - 3466839 + | NADH dehydrogenase subunit I nuoJ 3466836 - 3467624 + | NADH dehydrogenase subunit J TERM 1828 3467808 - 3467864 + G 70 -5.9 -4.18018 | gap 2 AGATGATCGCGTTCT TCACCATGGTGGTGGCC--GCCTGCGA AGTGG TCGTCGGCCTGGCCATCATCATGACGA TTTTCCGTACCCGCA nuoK 3467621 - 3467920 + | NADH dehydrogenase subunit K nuoL 3467931 - 3469832 + | NADH dehydrogenase subunit L nuoM 3469829 - 3471490 + | NADH dehydrogenase subunit M TERM 1829 3472843 - 3472893 + G 73 -14.7 -2.8474 | gap 1, overlap 3472839 3472840 GCCGCCGCTTCCGCC GGC-GCGGTGCCGCTGGTAATCGT CGGC GTGATCTCCAGCGGCGTCGCCGCC TACTTCTACGTGCGG nuoN 3471487 - 3473082 + | NADH dehydrogenase subunit N PPE53 3474857 - 3473088 - | PPE family protein TERM 1830 3474058 - 3474078 + g 72 -11.9 -3.59979 | opp_overlap 3474072 CCAAAGTTTCCGTTG CCGAGGTTT CCA AAGCCTCGG TTTCCGCTGCCCAGA PPE70 3477006 - 3475105 - | PPE family protein JTY_3179 3477822 - 3477181 - | putative transcriptional regulatory protein JTY_3180 3478981 - 3477833 - | putative dioxygenase JTY_3181 3479487 - 3478897 - | putative integral membrane protein TERM 1831 3478950 - 3478964 + g 70 -11.4 -3.43676 | opp_overlap 3478945, overlap 3478961 TCGGTAAGGATGTCT CCGAGC TCG GCTCGG TTATCAGTTGATAAC TERM 1832 3478961 - 3479009 + g 100 -21.5 -3.28712 | opp_overlap 3478945, overlap 3478950 GTCTCCGAGCTCGGC TCGGTTATCAGTTGATAACAT ACCCTCC ATGTTATCGACTGATAACCGA TTGTCAACAGCGCGC JTY_3182 3480755 - 3479484 - | putative secreted protein moxR3 3481747 - 3480785 - | putative methanol dehydrogenase transcriptional regulatory protein JTY_3184 3482237 - 3481755 - | hypothetical protein JTY_3185 3483193 - 3482234 - | hypothetical protein TERM 1833 3483070 - 3483043 - G 71 -14 -2.82156 | overlap 3483040 3483038 CGACAATGAACATCA GCGCCGCCCGGC TGCC GCCGGCCGCCGC GAGCGGTGCACCGTC JTY_3186 3483899 - 3483273 - | putative transcriptional regulatory protein JTY_3187 3483944 - 3485080 + | hypothetical protein TERM 1834 3485663 - 3485644 - g 74 -12.8 -3.50853 | overlap 3485645 GTGGGGGAACCAGAA CCGGCGGG CCGG CCCGCCGA CCCACCCTTCGAGGG JTY_3188 3485080 - 3486204 + | hypothetical protein aofH 3486347 - 3487693 + | putative flavin-containing monoamine oxidase hpx 3488587 - 3487688 - | putative non-heme haloperoxidase TERM 1835 3488448 - 3488466 + g 81 -12.4 -3.83026 | GCGATCACCCGGTAG TCGCCGGC CAG GTCGGCGA TTTGGTATGCCCAGG JTY_3191 3489206 - 3488724 - | hypothetical protein JTY_3192 3489887 - 3489285 - | putative transcriptional regulatory protein JTY_3193 3489980 - 3490687 + | short chain dehydrogenase JTY_3194 3490702 - 3492189 + | amidase mesTb 3492503 - 3492186 - | putative epoxide hydrolase mesTa 3493141 - 3492515 - | putative epoxide hydrolase JTY_3197 3493288 - 3494148 + | putative peroxidase JTY_3198 3494279 - 3494638 + | hypothetical protein JTY_3199 3494878 - 3495171 + | hypothetical alanine rich protein JTY_3200 3495459 - 3496748 + | hypothetical protein JTY_3201 3497529 - 3497095 - | hypothetical alanine rich protein JTY_3202 3497984 - 3497532 - | hypothetical protein TERM 1836 3498011 - 3498044 + H 73 -8.7 -3.9712 | GCAACGGAAGGTGTT TGCCGTCCGCGCTGG GCCT TCGGCGCAGCTGGCA TTTGTGGTCAGCTGC JTY_3203 3498215 - 3498559 + | hypothetical protein JTY_3204 3498556 - 3498885 + | putative transcriptional regulatory protein TERM 1837 3499015 - 3499042 + F 77 -12.6 -3.55444 | opp_overlap 3499015 3499016, overlap 3499016 TCCCGCCCATGAAAA CGGCCCCCGGAG TCTC CTCCGAGGGCCA TTTCGCCGGTAGCGG TERM 1838 3499042 - 3499015 - f 100 -17 -4.25104 | opp_overlap 3499015 3499016, overlap 3499016 TCCCGCCCATGAAAA CGGCCCCCGGAG TCTC CTCCGAGGGCCA TTTCGCCGGTAGCGG TERM 1839 3499016 - 3499041 + F 81 -16.1 -2.73124 | opp_overlap 3499015 3499016, overlap 3499015 CCCGCCCATGAAAAC GGCCCCCGGAG TCTC CTCCGAGGGCC ATTTCGCCGGTAGCG TERM 1840 3499041 - 3499016 - f 91 -18.3 -3.14848 | opp_overlap 3499016 3499015, overlap 3499015 CCCGCCCATGAAAAC GGCCCCCGGAG TCTC CTCCGAGGGCC ATTTCGCCGGTAGCG TERM 1841 3499682 - 3499668 - g 71 -2.7 -4.62069 | overlap 3499669 3499670 GCTGCACGCCAAAAA CCGGC TCCTC GACGG GCAGCGCCCGGTTGA JTY_3205 3499423 - 3499770 + | hypothetical protein JTY_3206 3499767 - 3500387 + | hypothetical protein TERM 1842 3500511 - 3500527 + T 73 -11.5 -3.54424 | opp_overlap 3500504 CAACGGAATGGCCTA GCCGCCG TCG CGGTGGC TTTGCGCGACTGGGG JTY_3207 3501812 - 3500547 - | hypothetical protein TERM 1843 3501390 - 3501369 - G 70 -10.1 -3.72893 | opp_overlap 3501369 3501388 GATCTGCTTATGAAA CGCCGCG TTGATCGC CGCGGCG TCATTCGACGGATTG TERM 1844 3501616 - 3501604 - G 71 -9.1 -3.78775 | GCTGGCAGCATGAAA GCGTC GTC GACGC GCAGATCGGGGCATT JTY_3208 3503470 - 3502436 - | putative transposase TERM 1845 3504481 - 3504453 - H 100 -21.9 -4.2558 | opp_overlap 3504453 CATCGGGCATGAAAA TGACCCCAGAGGT CGC ACCTCTGGGGTCA TTTCCGCTGGTAGCG TERM 1846 3504453 - 3504481 + H 100 -21.9 -3.62096 | opp_overlap 3504453 CATCGGGCATGAAAA TGACCCCAGAGGT CGC ACCTCTGGGGTCA TTTCCGCTGGTAGCG TERM 1847 3504829 - 3504858 + G 72 -13.5 -3.14132 | overlap 3504824 CTTGAGCTGTCCACC GGGATCGCGTTGG CGTT CCCGCGCGGTCCC TTCGTCCCGGCAGCC JTY_3209 3504685 - 3505146 + | hypothetical alanine and proline-rich protein TERM 1848 3505288 - 3505247 - T 100 -24.7 -2.78816 | opp_overlap 3505247 3505254, overlap 3505254 GCACCCGTGAGCAGA CGCAGAAGTCCCCGATTTC CGGT GAAATCGGCGACTTCTGCG TCTGCTCGCCGCGAG TERM 1849 3505247 - 3505288 + T 100 -24.7 -2.78384 | opp_overlap 3505247 3505254, overlap 3505254 GCACCCGTGAGCAGA CGCAGAAGTCCCCGATTTC CGGT GAAATCGGCGACTTCTGCG TCTGCTCGCCGCGAG TERM 1850 3505254 - 3505281 + T 76 -12.8 -3.40299 | opp_overlap 3505247 3505254, overlap 3505247 TGAGCAGACGCAGAA GTCCCCGATTTC CGGT GAAATCGGCGAC TTCTGCGTCTGCTCG TERM 1851 3505281 - 3505254 - T 76 -12.8 -3.40299 | opp_overlap 3505254 3505247, overlap 3505247 TGAGCAGACGCAGAA GTCCCCGATTTC CGGT GAAATCGGCGAC TTCTGCGTCTGCTCG JTY_3210 3508294 - 3505316 - | hypothetical protein TERM 1852 3506648 - 3506633 - G 83 -4 -5.19328 | gap 1, overlap 3506634 3506635 ATTGGAGAACAAAAA GTTTCGC TCC GCGAA-C TTCGCAGCGAACACG TERM 1853 3508130 - 3508100 - G 71 -14 -2.84098 | overlap 3508097 CCCGGCAACCAAGCA CACCACGATGCGGG TAG CCAGCATGGTGGTG AACACTGAGCGGTAG JTY_3211 3509408 - 3508386 - | putative secreted protein JTY_3212 3509486 - 3510904 + | hypothetical protein JTY_3213 3510910 - 3511809 + | hypothetical protein TERM 1854 3511789 - 3511799 + T 82 -3.2 -5.10208 | CGACAATGGACCAGG CATC CGC GGTG TTTTTGTTGACGTTA JTY_3214 3512018 - 3511818 - | hypothetical protein TERM 1855 3513309 - 3513297 - g 70 -4.1 -4.52857 | AGTGGTTACAGAAAA TGACC GTC AGTCA GATCGACCGCTCGGT JTY_3215 3512156 - 3513499 + | putative ATP-binding protein ABC transporter whiB7 3513811 - 3513533 - | putative transcriptional regulatory protein whiB-like UvrD2 3516343 - 3514241 - | putative DNA helicase II homolog TERM 1856 3515528 - 3515514 - G 71 -9.2 -3.79519 | AAGTCGAGTAGGAAA CGAGGC GAA GCCCCG GTAAACGAGTAGATG JTY_3218 3516467 - 3516721 + | putative glutaredoxin protein nudC 3517675 - 3516734 - | NADH pyrophosphatase JTY_3220 3518801 - 3517734 - | putative transmembrane cation transporter TERM 1857 3518312 - 3518323 + g 72 -7.2 -4.20696 | overlap 3518310 CGTCACTGACCATCG CGGC CACC GCCG TTTTGCCCTTGGTGC JTY_3221 3522168 - 3518863 - | putative ATP-dependent DNA helicase JTY_3222 3525332 - 3522165 - | putative ATP-dependent DNA helicase TERM 1858 3522479 - 3522493 + g 72 -5.6 -4.34402 | CATCGTCCTTGCTGA CCGGTG TCT TGCCGG TTTTGATGTCGACGA JTY_3223 3525409 - 3525627 + | hypothetical protein TERM 1859 3526345 - 3526333 - g 71 -9.1 -3.85698 | opp_overlap 3526332 3526333 GCGGCCCTGGACAAA CGGCT AGG AGCCG ATTTTGAGCTACTAG lipV 3525769 - 3526443 + | putative lipase JTY_3225 3526446 - 3526751 + | putative DNA-methyltransferase JTY_3226 3527636 - 3526758 - | hypothetical protein moeB1 3528841 - 3527663 - | molybdopterin biosynthesis-like protein JTY_3228 3529789 - 3528932 - | hypothetical protein JTY_3229 3530135 - 3530821 + | putative transcriptional regulatory protein TB9.4 3531080 - 3530808 - | hypothetical protein JTY_3231 3531405 - 3531965 + | hypothetical threonine and proline rich protein JTY_3232 3532670 - 3531975 - | hypothetical protein rhlE 3532929 - 3534512 + | putative ATP-dependent RNA helicase TERM 1860 3534574 - 3534605 + G 73 -13 -3.29471 | gap 1, opp_overlap 3534551, overlap 3534578 TCGCGGCCGCCGCGA CGATCGCGGTCGTGG TGG CCGTGGCCGCG-TCG TTGATCTGGTGGACC TERM 1861 3534934 - 3534990 + G 79 -2.1 -5.00616 | gap 2, overlap 3534981 TCAGCACCATCGATG GATCCACCGGTCG--CCGGGGAGCCGC CCGCA GCGGCTACGCGGATCCGCGGGTGCGTC TTTTTTCCGACGGCA JTY_3234 3534525 - 3535748 + | hypothetical alanine valine rich protein TERM 1862 3535813 - 3535772 - T 100 -25.5 -2.78384 | gap 1, opp_overlap 3535772 3535779, overlap 3535779 GTTGGCGCGAGCAGA CGCAAAATCGCCCGAAA-CC GAT GGCTTTCGGGCGATTTTGCG TCTGCTCGCGCTACA TERM 1863 3535772 - 3535813 + T 100 -25.5 -2.79183 | gap 1, opp_overlap 3535772 3535779, overlap 3535779 GTTGGCGCGAGCAGA CGCAAAATCGCCCGAAA-CC GAT GGCTTTCGGGCGATTTTGCG TCTGCTCGCGCTACA TERM 1864 3535806 - 3535779 - T 100 -15 -4.24948 | gap 1, opp_overlap 3535772 3535779, overlap 3535772 CGAGCAGACGCAAAA TCGCCCGAAA-CC GAT GGCTTTCGGGCGA TTTTGCGTCTGCTCG TERM 1865 3535779 - 3535806 + T 100 -15 -4.24948 | gap 1, opp_overlap 3535779 3535772, overlap 3535772 CGAGCAGACGCAAAA TCGCCCGAAA-CC GAT GGCTTTCGGGCGA TTTTGCGTCTGCTCG JTY_3235 3536624 - 3535824 - | putative soj/ParA-related protein gpm2_1 3536778 - 3537389 + | putative phosphoglycerate mutase TERM 1866 3538288 - 3538253 - g 73 -6 -4.36914 | GGGGTCCCGACAAAA GCTGCCACCGAGCTCA TCGC CGAACTCGAGGGCGAC CGTGGCTTCTACGCC entC_1 3537386 - 3538504 + | putative isochorismate synthase JTY_3238 3538652 - 3538984 + | putative acetyltransferase JTY_3239 3539367 - 3538936 - | putative integral membrane protein JTY_3240 3539600 - 3540565 + | hypothetical protein whiB1_1 3540845 - 3541099 + | putative transcriptional regulatory protein whiB-like TERM 1867 3541115 - 3541148 + T 100 -28.3 -3.05596 | opp_overlap 3541133, overlap 3541117 CGACTCAGTTCTGCA CAGTGCGGCCCCGAC ATAC GTCGGGGCCGCACTG TTGCGTAGCGCGCTA TERM 1868 3541117 - 3541146 + T 100 -25.1 -3.08679 | opp_overlap 3541133, overlap 3541115 ACTCAGTTCTGCACA GTGCGGCCCCGAC ATAC GTCGGGGCCGCAC TGTTGCGTAGCGCGC JTY_3242 3542666 - 3541161 - | putative two component sensor kinase TB7.3_1 3542898 - 3542683 - | hypothetical protein JTY_3244 3543488 - 3543183 - | putative anti-sigma factor JTY_3245 3544036 - 3543485 - | hypothetical protein sigH_1 3544683 - 3544033 - | RNA polymerase sigma factor RpoE JTY_3247 3544983 - 3545831 + | short chain dehydrogenase JTY_3248 3545767 - 3545955 + | hypothetical protein JTY_3249 3545933 - 3546151 + | hypothetical protein JTY_3250 3547572 - 3546148 - | putative transferase JTY_3251 3548454 - 3547696 - | hypothetical protein aroA_1 3548509 - 3549861 + | 3-phosphoshikimate 1-carboxyvinyltransferase JTY_3253 3549858 - 3550850 + | hypothetical protein desA3_1 3552166 - 3550883 - | putative linoleoyl-CoA desaturase JTY_3255 3553386 - 3552244 - | putative oxidoreductase TERM 1869 3553455 - 3553425 - R 89 -12.6 -4.15044 | opp_overlap 3553429 3553434 CTTCCGCCCAACAAA GCTACGGTACCGTA ACC TACGGTTCCGTATC TAGGCCCGGACGCGC JTY_3256 3554005 - 3553496 - | hypothetical protein pvdS 3554889 - 3554002 - | putative transcriptional regulatory protein JTY_3258 3555332 - 3554913 - | hypothetical protein JTY_3259 3556323 - 3555340 - | hypothetical protein TERM 1870 3556911 - 3556893 - g 79 -11.6 -3.7732 | overlap 3556890 GCCGGACACCAACAA GGCGCGGC CAT GCTGCGCC GCATCCGGCTGACAC JTY_3260 3556434 - 3557075 + | hypothetical alanine arginine proline rich protein JTY_3261 3558250 - 3557093 - | putative integral membrane transport protein TERM 1871 3557950 - 3557923 - G 70 -6.3 -4.19238 | gap 1 CGTCCAACCCCAAAA GCCA-GCCCG CCACCGCAC CGGGCGTGGC GTTGAGGACGATATC JTY_3262 3558737 - 3558255 - | hypothetical protein JTY_3263 3559532 - 3558798 - | putative integral membrane protein TERM 1872 3559257 - 3559245 - G 71 -9.1 -3.78778 | CCAGTACAGCAACAA CAGCG CAA CGCTG GCCAGCAGTACATAG JTY_3264 3562737 - 3559591 - | putative transmembrane transport protein TERM 1873 3561880 - 3561860 - G 77 -3.9 -4.79223 | overlap 3561861 3561862 CCATAGCAGTAAAAA CCCGCTG CGGCGAC CAGCGTG AGCAGGTTGCCCGCC TERM 1874 3562243 - 3562197 - G 73 -13.7 -3.17527 | overlap 3562195 CATTGACCAGTAACA CCCACCG-CCAGCCGGCCCACTC CAC GAG-GAGCCCGCCGATCGGCGGG CCCAGGCCAGCCGCG TERM 1875 3562690 - 3562665 - G 73 -12.5 -3.44051 | overlap 3562640 3562666 3562679 CCGCTACCAGCAGAA CCGACGCCGAC GAAG GTCGGCGACGA CGGGTGAGATTAGCG secA1 3565665 - 3562816 - | preprotein translocase subunit TERM 1876 3562896 - 3562919 + g 78 -15.2 -3.23393 | overlap 3562895 GCTCGCGCCGGCTAG CACCGGCCGG CACT CCGGCCGGCG TCTTGTGGGCTCCAC JTY_3266 3566388 - 3565744 - | hypothetical protein TERM 1877 3565912 - 3565970 + g 72 -14.5 -2.73994 | gap 1, opp_overlap 3565914, overlap 3565915 TTCTTTGGTGCGAAC GATCCGCCCAGGCTCCCGCTCGACGACG GCAC CGTCGT-GATCGTGTGCCTCGGCTGGTC TGGTGTTGAAGCCGT JTY_3267 3567345 - 3566704 - | hypothetical protein JTY_3268 3568225 - 3567383 - | hypothetical protein lpqB 3570044 - 3568293 - | putative lipoprotein mtrB 3571747 - 3570044 - | two component sensory transduction histidine kinase mtrA 3572483 - 3571797 - | two component sensory transduction transcriptional regulatory protein tmk 3573197 - 3572553 - | thymidylate kinase TERM 1878 3572847 - 3572865 + g 75 -7.3 -4.34402 | opp_overlap 3572844 CCGCTGAACCCAGGC CGCTGCC TTCCC GGCCGCG TTTTCATGTAGGCGC TERM 1879 3573230 - 3573271 + r 91 -20.5 -2.78816 | gap 1, opp_overlap 3573230 3573237, overlap 3573237 GGCGGCGCGAGCAGA CGCAAAATCGCCC-TTTTCG TCA TGAAAATGGGCGATTTTGCG TCTGCTCGCGGGTGG TERM 1880 3573271 - 3573230 - R 90 -19.8 -2.78384 | gap 1, opp_overlap 3573230 3573237, overlap 3573237 GGCGGCGCGAGCAGA CGCAAAATCGCCC-TTTTC GTCAT GAAAATGGGCGATTTTGCG TCTGCTCGCGGGTGG TERM 1881 3573237 - 3573264 + r 85 -10 -4.24948 | gap 1, opp_overlap 3573230 3573237, overlap 3573230 CGAGCAGACGCAAAA TCGCCC-TTTTCG TCA TGAAAATGGGCGA TTTTGCGTCTGCTCG TERM 1882 3573264 - 3573237 - R 83 -9.3 -4.24948 | gap 1, opp_overlap 3573237 3573230, overlap 3573230 CGAGCAGACGCAAAA TCGCCC-TTTTC GTCAT GAAAATGGGCGA TTTTGCGTCTGCTCG sahH 3574781 - 3573294 - | S-adenosyl-homocysteine hydrolase JTY_3274 3575521 - 3574886 - | putative transcriptional regulatory protein JTY_3275 3575700 - 3575518 - | putative rubredoxin RubB JTY_3276 3575872 - 3575705 - | putative rubredoxin RubA alkB 3577122 - 3575872 - | putative transmembrane alkane 1-monooxygenase JTY_3278 3578718 - 3577231 - | putative cationic amino acid transport integral membrane protein TERM 1883 3578466 - 3578438 - G 72 -14.5 -2.67713 | overlap 3578435 3578434 GCATAAGAGAAGGTA TAGGCGCTGCCGG CCA CCGGCAGCGTCGA GGCGAACTCGGCGTA TERM 1884 3579873 - 3579859 - g 71 -9.2 -3.76968 | AACTCAGCTATGAAA GGCGAC CTG GCCGCC GAACTCAATCGGGCC JTY_3279 3578809 - 3580197 + | hypothetical protein manA 3581401 - 3580175 - | putative mannose-6-phosphate isomerase JTY_3281 3582449 - 3581409 - | hypothetical protein manB 3583843 - 3582446 - | phosphomannomutase/phosphoglucomutase TERM 1885 3583256 - 3583238 - G 79 -13.2 -3.70081 | overlap 3583229 ATACAAGGGCAACAA GGTGATCG AGT CGATCACC CCAAGGACCGCCGGC JTY_3283 3584436 - 3583945 - | hypothetical protein JTY_3284 3584559 - 3584978 + | hypothetical protein whiB2 3585275 - 3585006 - | putative transcriptional regulatory protein WhiB-like TERM 1886 3586288 - 3586252 - g 81 -10.7 -4.07568 | overlap 3586275 TGTCGGCGCTGAAAA GTCCAGCGCTGCAACCG AAG CGATCGCCGCCCTGGCC GACGCCGACATCATC fbiA 3585677 - 3586672 + | putative F420 biosynthesis protein TERM 1887 3586769 - 3586807 + G 87 -18.8 -2.70932 | TGAGCGCCGCCGTCG CCGCGGCGGCACCGTGGC TAC GCGACGGTGACGTCGTGG TGGTTACCAGCAAGG fbiB 3586669 - 3588015 + | F420-0-gamma-glutamyl ligase TERM 1888 3588625 - 3588601 - g 77 -5.6 -4.62069 | GCGCGAGGCGAAAAA GTCGCGGGAC TTCGC GTCCGTCGAC ACTGAGAACCTTTTT JTY_3288 3588311 - 3589972 + | putative DNA methylase manC 3591111 - 3590032 - | putative mannose-1-phosphate guanyltransferase wbbL1 3592006 - 3591113 - | putative dTDP-RHA:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase TERM 1889 3591672 - 3591643 - G 77 -16.3 -2.70932 | CGGGGTCCCGAATCA GCGGGCCCAGCGC GCCC GCGCGGGGCCAGC GGGAGGCGGCGTCCA rmld 3592931 - 3592017 - | putative dTDP-rhamnose modification protein JTY_3292 3593007 - 3594503 + | hypothetical protein JTY_3293 3594542 - 3595231 + | hypothetical protein JTY_3294 3595356 - 3595637 + | hypothetical protein ctpC 3595648 - 3597804 + | putative metal cation-transporting P-type ATPase C JTY_3296 3598469 - 3597801 - | putative integral membrane protein TERM 1890 3598197 - 3598159 - G 79 -7.2 -4.65895 | overlap 3598164 GCCGTCAGCCAAAAA GACACCGCAACTCCACGC TGT GCGCGGTGCTCCGCGGTC GCGGACCAAGTGCGG JTY_3297 3598570 - 3599754 + | hypothetical protein JTY_3298 3599759 - 3602053 + | putative transmembrane carbonic anhydrase fadE25 3603211 - 3602042 - | putative acyl-CoA dehydrogenase purE 3603760 - 3603236 - | putative phosphoribosylaminoimidazole carboxylase catalytic subunit purK 3605046 - 3603757 - | phosphoribosylaminoimidazole carboxylase ATPase subunit JTY_3302 3605000 - 3605818 + | putative transmembrane protein JTY_3303 3606291 - 3605773 - | putative transmembrane protein birA 3607134 - 3606334 - | putative biotin operon repressor TERM 1891 3607506 - 3607457 - g 84 -9.1 -4.57341 | gap 1 AATCTCGGTGAAAAA CGCCCGCTCGGCGACGGCGTGGTC ACC GGCTACGGCACCATCGA-CGGGCG CGACGTGTGCATCTT accD5 3607184 - 3608830 + | putative propionyl-CoA carboxylase beta chain 5 JTY_3306 3608811 - 3609281 + | hypothetical protein JTY_3307 3609278 - 3609946 + | Maf-like protein sseA 3609987 - 3610880 + | putative thiosulfate sulfurtransferase TERM 1892 3611042 - 3611053 + G 70 -2.2 -4.59773 | CCGGTCCCCGAGTGC CAGT CTCC GCTG TTTTTGCACGTCGAC JTY_3309 3610877 - 3611308 + | hypothetical protein TERM 1893 3611388 - 3611378 - f 74 -5.4 -4.65078 | overlap 3611380 AGACTTGTAAGAAAA TCTC TTA GAGA CGAAGAATCAGCCCG accA3 3611416 - 3613218 + | putative acetyl-/propionyl-coenzyme A carboxylase alpha chain sigF 3614013 - 3613228 - | RNA polymerase sigma factor rsbW 3614447 - 3614010 - | anti-sigma factor usfY 3615058 - 3614645 - | hypothetical protein JTY_3314 3615470 - 3615093 - | putative transmembrane protein lat 3616853 - 3615504 - | L-lysine aminotransferase TERM 1894 3616136 - 3616098 - G 78 -5.9 -4.66609 | gap 1, opp_overlap 3616099, overlap 3616099 CATCGCAGCGAAAAA CTCC-GGGCGGAAATGGC GGTC GCCACCCTCGCCCTGGAT GGGTTCGGCCACAAA JTY_3316 3617356 - 3616904 - | putative transcriptional regulatory protein TERM 1895 3617938 - 3617953 + G 75 -11.8 -3.63627 | ACCGGCTTTCGTCGC CGCGGC GGTG GCCGCG TTTGCGCTGTCGCGG JTY_3317 3617387 - 3618634 + | hypothetical protein pcd 3618661 - 3620145 + | putative piperideine-6-carboxilic acid dehydrogenase JTY_3319 3621054 - 3620245 - | hypothetical protein TERM 1896 3620871 - 3620922 + g 77 -13.1 -3.57561 | gap 1, overlap 3620875 3620880 CGGCGATGCGTTGGA GATTGGAGACGTCGGCCGCGTC ACGTTTGAC GACGCGGTCGACGT-TCCTAGC TTTCGCCGATTCGCG TERM 1897 3620875 - 3620918 + g 80 -16.9 -2.64651 | gap 1, overlap 3620871 3620880 GATGCGTTGGAGATT GGAGACGTCGGCCGCGTC ACGTTTGAC GACGCGGTCGACGT-TCC TAGCTTTCGCCGATT TERM 1898 3620880 - 3620914 + g 82 -16.5 -3.25088 | overlap 3620875 3620871 GTTGGAGATTGGAGA CGTCGGCCGCGTC ACGTTTGAC GACGCGGTCGACG TTCCTAGCTTTCGCC TERM 1899 3621461 - 3621433 - g 82 -6.6 -4.73613 | gap 1, opp_overlap 3621450, overlap 3621434 3621435 CTACCACCAACAAAA CCCCG-AGGCGGC GTGG GCCGCCTACGTCG GCCTCGGCCGATCGG JTY_3320 3621125 - 3621790 + | putative transcriptional regulatory protein TERM 1900 3622843 - 3622795 - g 71 -15.2 -2.62184 | gap 1 CCCCGGCGCACATCA TGGGCTCGGGCCAG-ACGTTCGG AGCG CCGCCGGTGCTGGCCCGCGCCCA CCATGGCTCGATCAG lhr 3621834 - 3626375 + | putative ATP-dependent helicase nei_1 3626379 - 3627146 + | putative endonuclease VIII lpqC 3628083 - 3627169 - | putative esterase lipoprotein atsB_1 3631022 - 3628110 - | putative arylsulfatase JTY_3325 3631959 - 3631042 - | hypothetical protein phoY1_1 3632636 - 3631971 - | putative phosphate-transport system transcriptional regulatory protein PhoU homolog 1 glpD2_1 3634501 - 3632744 - | putative glycerol-3-phosphate dehydrogenase lpdA_1 3635997 - 3634582 - | flavoprotein disulfide reductase JTY_3329 3636200 - 3636679 + | hypothetical protein amiA1_1 3637867 - 3636698 - | putative N-acyl-L-amino acid amidohydrolase amiB1_1 3639048 - 3637864 - | putative amidase deoD_1 3639113 - 3639919 + | purine nucleoside phosphorylase TERM 1901 3640152 - 3640195 + G 78 -13.8 -3.57144 | gap 1 GAGGTCTGGCTGGTT CGCCGGTGA-TCGTGGGGCGC GAC GCTCGGCACGGCTCACCGGCG TTTGCCGCTGCGGCC TERM 1902 3640220 - 3640233 + G 75 -4.5 -4.68994 | overlap 3640203 3640226 GCGGCCGCCGAAGTG CTTGC CGCC GCAGG TTTTTCCGTGCTGCT pmmB_1 3639923 - 3641527 + | putative phosphomannomutase upp_1 3642152 - 3641529 - | uracil phosphoribosyltransferase sapM_1 3642257 - 3643156 + | putative acid phosphatase JTY_3336 3643180 - 3644442 + | hypothetical protein JTY_3337 3645389 - 3644463 - | hypothetical protein TERM 1903 3645804 - 3645761 - R 87 -18.8 -2.70932 | gap 1 CGGCCCGGTCAACGA GCGCTATGC-GCCGCCACCGG CAG CCGGGGGCGGCGGCGCAGCAC CGGGATCGTCAAGCA JTY_3338 3646075 - 3645764 - | secreted protein antigen TERM 1904 3646168 - 3646182 + r 73 -12.8 -3.22884 | CTGTGACCCATGAGC GCCGCG AAC CGCGGC TTGATCACTTCGTCG add_1 3647243 - 3646146 - | adenosine deaminase deoA_1 3648526 - 3647243 - | thymidine phosphorylase cdd_1 3648924 - 3648523 - | cytidine deaminase TERM 1905 3649310 - 3649335 + G 70 -2.4 -4.57569 | GATCGTCGGCCTGAT GGAGTACGGC CTAGTC GCCGCGGTCC TTTTTCACGCACTGA sdhC_1 3649161 - 3649499 + | putative succinate dehydrogenase sdhD_1 3649496 - 3649930 + | putative succinate dehydrogenase TERM 1906 3650041 - 3650058 + T 71 -9.1 -3.68073 | overlap 3650043 GAACTCGTCGCCGAG TGCGGCG ATGC CGCCGTA TTGTTCGATCAGCTC JTY_3345 3652663 - 3651746 - | hypothetical protein phoY1_2 3653340 - 3652675 - | putative phosphate-transport system transcriptional regulatory protein PhoU homolog 1 glpD2_2 3655205 - 3653448 - | putative glycerol-3-phosphate dehydrogenase lpdA_2 3656701 - 3655286 - | flavoprotein disulfide reductase JTY_3349 3656904 - 3657383 + | hypothetical protein amiA1_2 3658571 - 3657402 - | putative N-acyl-L-amino acid amidohydrolase amiB1_2 3659752 - 3658568 - | putative amidase deoD_2 3659817 - 3660623 + | purine nucleoside phosphorylase TERM 1907 3660856 - 3660899 + G 78 -13.8 -3.57144 | gap 1 GAGGTCTGGCTGGTT CGCCGGTGA-TCGTGGGGCGC GAC GCTCGGCACGGCTCACCGGCG TTTGCCGCTGCGGCC TERM 1908 3660924 - 3660937 + G 75 -4.5 -4.68994 | overlap 3660907 3660930 GCGGCCGCCGAAGTG CTTGC CGCC GCAGG TTTTTCCGTGCTGCT pmmB_2 3660627 - 3662231 + | putative phosphomannomutase upp_2 3662856 - 3662233 - | uracil phosphoribosyltransferase sapM_2 3662961 - 3663860 + | putative acid phosphatase JTY_3356 3663884 - 3665146 + | hypothetical protein JTY_3357 3666093 - 3665167 - | hypothetical protein TERM 1909 3666508 - 3666465 - R 87 -18.8 -2.70932 | gap 1 CGGCCCGGTCAACGA GCGCTATGC-GCCGCCACCGG CAG CCGGGGGCGGCGGCGCAGCAC CGGGATCGTCAAGCA JTY_3358 3666779 - 3666468 - | secreted protein antigen TERM 1910 3666872 - 3666886 + r 73 -12.8 -3.22884 | CTGTGACCCATGAGC GCCGCG AAC CGCGGC TTGATCACTTCGTCG add_2 3667947 - 3666850 - | adenosine deaminase deoA_2 3669230 - 3667947 - | thymidine phosphorylase cdd_2 3669628 - 3669227 - | cytidine deaminase TERM 1911 3670014 - 3670039 + G 70 -2.4 -4.57569 | GATCGTCGGCCTGAT GGAGTACGGC CTAGTC GCCGCGGTCC TTTTTCACGCACTGA sdhC_2 3669865 - 3670203 + | putative succinate dehydrogenase sdhD_2 3670200 - 3670634 + | putative succinate dehydrogenase TERM 1912 3670745 - 3670762 + T 71 -9.1 -3.68073 | overlap 3670747 GAACTCGTCGCCGAG TGCGGCG ATGC CGCCGTA TTGTTCGATCAGCTC JTY_3365 3673367 - 3672450 - | hypothetical protein phoY1_3 3674044 - 3673379 - | putative phosphate-transport system transcriptional regulatory protein PhoU homolog 1 glpD2_3 3675909 - 3674152 - | putative glycerol-3-phosphate dehydrogenase lpdA_3 3677405 - 3675990 - | flavoprotein disulfide reductase JTY_3369 3677608 - 3678087 + | hypothetical protein amiA1_3 3679275 - 3678106 - | putative N-acyl-L-amino acid amidohydrolase amiB1_3 3680456 - 3679272 - | putative amidase deoD_3 3680521 - 3681327 + | purine nucleoside phosphorylase TERM 1913 3681560 - 3681603 + G 78 -13.8 -3.57144 | gap 1 GAGGTCTGGCTGGTT CGCCGGTGA-TCGTGGGGCGC GAC GCTCGGCACGGCTCACCGGCG TTTGCCGCTGCGGCC TERM 1914 3681628 - 3681641 + G 75 -4.5 -4.68994 | overlap 3681611 3681634 GCGGCCGCCGAAGTG CTTGC CGCC GCAGG TTTTTCCGTGCTGCT pmmB_3 3681331 - 3682935 + | putative phosphomannomutase upp_3 3683560 - 3682937 - | uracil phosphoribosyltransferase sapM_3 3683665 - 3684564 + | putative acid phosphatase JTY_3376 3684588 - 3685850 + | hypothetical protein JTY_3377 3686797 - 3685871 - | hypothetical protein TERM 1915 3687212 - 3687169 - R 87 -18.8 -2.70932 | gap 1 CGGCCCGGTCAACGA GCGCTATGC-GCCGCCACCGG CAG CCGGGGGCGGCGGCGCAGCAC CGGGATCGTCAAGCA JTY_3378 3687483 - 3687172 - | secreted protein antigen TERM 1916 3687576 - 3687590 + r 73 -12.8 -3.22884 | CTGTGACCCATGAGC GCCGCG AAC CGCGGC TTGATCACTTCGTCG add_3 3688651 - 3687554 - | adenosine deaminase deoA_3 3689934 - 3688651 - | thymidine phosphorylase cdd_3 3690332 - 3689931 - | cytidine deaminase TERM 1917 3690718 - 3690743 + G 70 -2.4 -4.57569 | GATCGTCGGCCTGAT GGAGTACGGC CTAGTC GCCGCGGTCC TTTTTCACGCACTGA sdhC_3 3690569 - 3690907 + | putative succinate dehydrogenase sdhD_3 3690904 - 3691338 + | putative succinate dehydrogenase sdhA 3691618 - 3693240 + | succinate dehydrogenase flavoprotein subunit sdhB 3693240 - 3694031 + | succinate dehydrogenase iron-sulphur protein subunit TERM 1918 3694090 - 3694049 - T 100 -24.1 -2.78384 | gap 1, opp_overlap 3694049 3694056, overlap 3694056 GCTTGCGCGAGCAGA CGCAAAATCGCCCGAAAACC AGT GGTTTT-GGGCGATTTTGCG TCTGCTCGCGCAGCC TERM 1919 3694049 - 3694090 + T 100 -24.1 -2.78384 | gap 1, opp_overlap 3694049 3694056, overlap 3694056 GCTTGCGCGAGCAGA CGCAAAATCGCCCGAAAACC AGT GGTTTT-GGGCGATTTTGCG TCTGCTCGCGCAGCC TERM 1920 3694083 - 3694056 - T 100 -13.6 -4.24948 | gap 1, opp_overlap 3694049 3694056, overlap 3694049 CGAGCAGACGCAAAA TCGCCCGAAAACC AGT GGTTTT-GGGCGA TTTTGCGTCTGCTCG TERM 1921 3694056 - 3694083 + T 100 -13.6 -4.24948 | gap 1, opp_overlap 3694056 3694049, overlap 3694049 CGAGCAGACGCAAAA TCGCCCGAAAACC AGT GGTTTT-GGGCGA TTTTGCGTCTGCTCG JTY_3386 3694538 - 3694110 - | hypothetical protein JTY_3387 3694784 - 3694542 - | hypothetical protein JTY_3388 3695520 - 3694906 - | putative methyltransferase TERM 1922 3695206 - 3695155 - G 75 -9.5 -4.13767 | gap 2, overlap 3695157 CGCCGCATCCCAAAA GAGCCTGCTGAGCACCAGCGCGAAA CGCG TCTCGC-CGGGTTCCCAGCAG-CCC AAGTCGGCCTGCACG TERM 1923 3695205 - 3695157 - G 73 -11 -3.6692 | gap 1, overlap 3695155 CCGCATCCCAAAAGA GCCTGCTGAGCACCAGCGCGAAA CGCG TCTCGC-CGGGTTCCCAGCAGCC CAAGTCGGCCTGCAC moaX 3696182 - 3695517 - | putative MoaD-MoaE fusion protein moaC 3696716 - 3696183 - | molybdenum cofactor biosynthesis protein C TERM 1924 3696255 - 3696265 + g 83 -2.4 -5.15634 | CCGGTAATGACCCGA TCGG CCA CCGC TTTTTTCGTCCAATC moaB3 3697087 - 3696713 - | putative pterin-4-alpha-carbinolamine dehydratase moaA3 3698248 - 3697184 - | putative molybdenum cofactor biosynthesis protein A JTY_3393 3698303 - 3698653 + | hypothetical protein JTY_3394 3698631 - 3699017 + | hypothetical protein TERM 1925 3699765 - 3699796 + GT 72 -11.6 -3.2614 | gap 1 AATACGCGACGCCGC GGGGC-ACCGGTC TCCACTT GGCCGGTTGCCCC TTCGTATCGGGCGTA embR2 3698893 - 3700038 + | putative transcriptional regulatory protein JTY_3396 3700778 - 3700080 - | hypothetical protein TERM 1926 3700679 - 3700637 - G 95 -20 -2.78384 | opp_overlap 3700643 3700644, overlap 3700644 3700647 CCTGGGCCGAGCAGA CGCAAAAGCACCCCATTTCG GCA CGAAATGGGGGCCCTTTGCG TCTCAGTGTCGGTGT TERM 1927 3700671 - 3700644 - G 95 -15 -4.24948 | gap 1, opp_overlap 3700644 3700643, overlap 3700637 3700647 CGAGCAGACGCAAAA GCACCCCATTTCG GCA CGAAATGGGG-GC CCTTTGCGTCTCAGT TERM 1928 3700669 - 3700647 - G 81 -16.4 -3.12666 | opp_overlap 3700644 3700643, overlap 3700644 3700637 GCAGACGCAAAAGCA CCCCATTTCG GCA CGAAATGGGG GCCCTTTGCGTCTCA TERM 1929 3701476 - 3701499 + Gr 70 -12.4 -3.14344 | opp_overlap 3701460 CAGCAGGCCCTGCGG ACCTGGCTGG ACAC CCAGCCAGGA TTGGTCGCCGAACTC TERM 1930 3701705 - 3701690 - gR 76 -9 -4.08216 | TGACCCGGTTCAAAA GCGAAG CCGC CTTCGC CTGCCATGCCGCAGT sigJ 3703528 - 3702590 - | RNA polymerase sigma factor JTY_3397 3700945 - 3702657 + | putative transposase fusion protein TERM 1931 3703841 - 3703863 + G 74 -5.5 -4.56597 | opp_overlap 3703858 GCCTGGCCCGCTACG CGCCCGG GGACCTAAA CCGGGTG TTTTTCACCAGCGGC TERM 1932 3704175 - 3704190 + G 77 -6.8 -4.57073 | overlap 3704147 GTTCGAAGGCCCCGA CACCGT GGCC GCGGTG TTTTTGGAGCCGGTG TERM 1933 3704226 - 3704240 + G 82 -12.8 -3.90922 | opp_overlap 3704211 3704212 CGCGGGCGGCTGCAT CCCGGC GCC GCCGGG TTATTTCGAACGGGT TERM 1934 3704618 - 3704651 + G 74 -7.4 -4.16842 | gap 1, overlap 3704620 AGAAACTGTACGACC TGCCCATCGTCGGCG ACATC CGC-GGCGAGGGGTA TTTCTTCGGCATCGA JTY_3399 3703588 - 3704904 + | hypothetical protein dacB1 3704973 - 3706190 + | putative penicillin-binding protein sugI 3706286 - 3707794 + | putative sugar-transport integral membrane protein nagA 3707791 - 3708942 + | putative N-acetylglucosamine-6-phosphate deacetylase JTY_3403 3709978 - 3709133 - | hypothetical proline rich protein JTY_3404 3710123 - 3710434 + | hypothetical protein TERM 1935 3710878 - 3710844 - g 72 -11.6 -3.55444 | overlap 3710845 GTTGGATCCTGGAAA GC-GACCTCGATGAGC CCACC GC-CATCGAGGTCAGC GACATTCACGCCTAG JTY_3405 3710453 - 3710893 + | putative transcriptional regulatory protein JTY_3406 3711796 - 3710927 - | putative integral membrane protein trpS 3712827 - 3711817 - | tryptophanyl-tRNA synthetase TERM 1936 3713086 - 3713097 + G 79 -3.6 -4.91109 | opp_overlap 3713073, overlap 3713073 AACGGCGGACCGGCC TCGG GCAC CCGG TTTTTGTCCTCGGCG JTY_3408 3712852 - 3713745 + | hypothetical protein TERM 1937 3713760 - 3713801 + T 100 -24.1 -2.79302 | gap 1, opp_overlap 3713760 3713767, overlap 3713767 GCGGGCGCGAGCAGA CGCAAAATCGCCC-ATTTCG GCA CGAAATTGGGCGATTTTGCG TCTGCTCGCCCTAAT TERM 1938 3713801 - 3713760 - T 100 -24.1 -2.78384 | gap 1, opp_overlap 3713760 3713767, overlap 3713767 GCGGGCGCGAGCAGA CGCAAAATCGCCC-ATTTCG GCA CGAAATTGGGCGATTTTGCG TCTGCTCGCCCTAAT TERM 1939 3713767 - 3713794 + T 100 -13.6 -4.24948 | gap 1, opp_overlap 3713760 3713767, overlap 3713760 CGAGCAGACGCAAAA TCGCCC-ATTTCG GCA CGAAATTGGGCGA TTTTGCGTCTGCTCG TERM 1940 3713794 - 3713767 - T 100 -13.6 -4.24948 | gap 1, opp_overlap 3713767 3713760, overlap 3713760 CGAGCAGACGCAAAA TCGCCC-ATTTCG GCA CGAAATTGGGCGA TTTTGCGTCTGCTCG icd1 3715041 - 3713812 - | isocitrate dehydrogenase metC 3715324 - 3716673 + | O-acetylhomoserine aminocarboxypropyltransferase metX 3716685 - 3717824 + | homoserine O-acetyltransferase TERM 1941 3718162 - 3718192 + G 74 -14.7 -3.05384 | overlap 3718164 GCACTGGGTGGATCC CGCCCGGGCGATT CCGGA GGTCGCCCGGGTG TTGCGTCCGGGCGGG TERM 1942 3718164 - 3718190 + G 73 -13.7 -3.08679 | overlap 3718162 ACTGGGTGGATCCCG CCCGGGCGATT CCGGA GGTCGCCCGGG TGTTGCGTCCGGGCG TERM 1943 3718486 - 3718446 - g 72 -6.8 -4.25283 | gap 2 AGGTCCGCACCAAAA CGCTCGACCGGGTGCGGCAG TTG CTGGC-CACCCATCCG-GCG CTGGCGAATAGCAAC JTY_3412 3717821 - 3718552 + | putative methyltransferase PPE54 3722577 - 3718561 - | PPE family protein TERM 1944 3722116 - 3722077 - G 79 -13.4 -3.6502 | opp_overlap 3722082 CAGCGGCGAGCCAAA CGGCGCCAACGCCTCGGC CGCC GCCGAGGCGCCGGTGTGG TACCCCAGCATCGCG TERM 1945 3722082 - 3722111 + g 72 -14.9 -2.78384 | opp_overlap 3722077 GCGAGCCAAACGGCG CCAACGCCTCGGC CGCC GCCGAGGCGCCGG TGTGGTACCCCAGCA TERM 1946 3722479 - 3722447 - G 78 -14.2 -3.61178 | gap 2 GTCACCGACCCGAAA GCCGCCGCCGCCGAGC CCA GCTCGGCGGC--CAGC TCATCCCAGGCCGCG PE_PGRS50 3728256 - 3722626 - | hypothetical protein TERM 1947 3723147 - 3723109 - G 100 -15.8 -4.56597 | opp_overlap 3723115, overlap 3723111 CTTGCCGCCGAAAAA GCCGCTGCCGCCGGCGCC GCC GGCGCCGCCGCCACCGCC GCTGCCGCCTTGGGT TERM 1948 3723145 - 3723111 - G 80 -17 -2.60032 | opp_overlap 3723115, overlap 3723109 TGCCGCCGAAAAAGC CGCTGCCGCCGGCGCC GCC GGCGCCGCCGCCACCG CCGCTGCCGCCTTGG TERM 1949 3723697 - 3723642 - G 75 -15.8 -2.70932 | CCTTGCCGCCAAGCA CGACGCCGGTGCCGCCGGCGCCGCCG TTGC CGCCGTTGCCGCCGGCGCCGCCGCCA ATGCCGCTGCCGCTG TERM 1950 3724529 - 3724574 + g 100 -11.7 -4.30576 | overlap 3724530 TTGAGGCCAGTGCCC CCATTACCGCCGGCACCACCG GAGC CGGCGTTGCCGGTGGTCGTGC TTTTGCTGCTACCGC TERM 1951 3724530 - 3724573 + g 76 -15.2 -3.18024 | overlap 3724529 TGAGGCCAGTGCCCC CATTACCGCCGGCACCACCG GAGC CGGCGTTGCCGGTGGTCGTG CTTTTGCTGCTACCG TERM 1952 3724886 - 3724846 - G 73 -11.1 -3.74519 | gap 2 AACACCGCTAGCAAA GTCGCCC--GCGCCGCCGG GACCG CCGGCGCCGCCTGGGCCAC CCAACCCGGTGCTAG TERM 1953 3725280 - 3725338 + g 83 -15 -3.74693 | opp_overlap 3725263 CGGTGCCGGCCTTGC CTCCGGTGCCGCCGACGCCGGCGTTGCC GCC GTTGCCGCCGTTGCCGCCGGTACCGGGG TTTCCTACGGTGCCG TERM 1954 3726426 - 3726436 + g 79 -8.2 -4.36914 | overlap 3726411 3726411 3726427 GGCCGCCGTTACCAC CGGC GCC GCCG TTTTCTCCCGCGACG TERM 1955 3727072 - 3727086 + g 71 -12.8 -3.3164 | ATGACCGCCATTACC GCCGGC CCC GCCGGC TTGTAGGGGTGAGTT TERM 1956 3727602 - 3727549 - G 95 -16.5 -4.03234 | overlap 3727550 GTTGCCGTAGACAAA TCCGCCGGACCCGCCGACGCCACCA TTGG TGCCGGCGCCGCCGGACCCGCCGGC CCCGAACAACCAGGC TERM 1957 3727601 - 3727550 - G 100 -20 -3.01726 | overlap 3727549 TTGCCGTAGACAAAT CCGCCGGACCCGCCGACGCCACCA TTGG TGCCGGCGCCGCCGGACCCGCCGG CCCCGAACAACCAGG TERM 1958 3727664 - 3727612 - G 77 -13.2 -3.61398 | gap 1, overlap 3727615 GCCGGCCCCGAACAA CCAGGCGTTGCCGCCGGCACCACCG TTAG CGCCGGTCCCGCCGGCCCCGCC-GG CCCCGCCGTTGCCGT TERM 1959 3727662 - 3727615 - G 73 -14.6 -2.93073 | overlap 3727612 GGCCCCGAACAACCA GGCGTTGCCGCCGGCACCACCG TTAG CGCCGGTCCCGCCGGCCCCGCC GGCCCCGCCGTTGCC TERM 1960 3727740 - 3727687 - G 77 -16.5 -2.70932 | GTTGCCGTTCAACCA CCCGCCGGATCCGCCGACACCGCCG GCAG CGCCGGCCCCGCCGGACCCGCCGGA CCCGCCGTTGCCGAA JTY_3415 3728937 - 3728680 - | hypothetical protein PPE55a 3738665 - 3732375 - | PPE Family protein TERM 1961 3733017 - 3733006 - G 72 -7.2 -4.1822 | overlap 3733007 CCGGAGTTGAAGAAA CCCG ACGA CGGG GTGGCGGTCGCGTTC TERM 1962 3736445 - 3736427 - G 80 -17.4 -2.62616 | opp_overlap 3736437 3736439, overlap 3736386 CGATGCCCGAGACCA CCGCCGGG GTC CCCGGCGG CAACCCGCCGGTGTT TERM 1963 3736437 - 3736458 + g 73 -12.9 -3.28712 | opp_overlap 3736427, overlap 3736439 GACCACCGCCGGGGT CCCCGGCGG CAAC CCGCCGGTG TTGTACAGCCCCGAC TERM 1964 3736439 - 3736456 + g 73 -14.1 -3.21276 | opp_overlap 3736427, overlap 3736437 CCACCGCCGGGGTCC CCGGCGG CAAC CCGCCGG TGTTGTACAGCCCCG TERM 1965 3736605 - 3736657 + g 70 -13.5 -3.01712 | opp_overlap 3736636 GAAATTCCCGAAGCC CGA-CACCCCACCGTCGCCGGAGTT GAAGA AAC-CCGACGACGGAGCGGTGGTCG TGTTGCCAAAGCCCG JTY_3418 3739245 - 3739736 + | putative transposase JTY_3419 3740513 - 3739773 - | putative transposase TERM 1966 3745216 - 3745194 - R 73 -11.2 -3.65046 | opp_overlap 3745194 GCCGGAGTTGAAGAA CCCCGACGAC GGG GTCGCCGTGG TGTTGCCGAACCCTG TERM 1967 3749281 - 3749249 - R 77 -4 -4.83169 | overlap 3749278 ACGGCTCGAGAAAAA GCCCTATCGAACCG GCGAG CGGGTCAAGAGCGC GAATCGGCGAGATGG PPE56a 3752570 - 3751272 - | PPE Family protein JTY_3423 3753608 - 3752814 - | hypothetical protein JTY_3424 3754061 - 3753690 - | putative oxidoreductase JTY_3425 3754464 - 3754204 - | hypothetical protein JTY_3426 3754579 - 3754968 + | hypothetical protein JTY_3427 3755275 - 3754982 - | hypothetical protein folD 3756117 - 3755272 - | putative methylenetetrahydrofolate dehydrogenase TERM 1968 3756179 - 3756221 + H 71 -11.4 -3.51934 | opp_overlap 3756190 3756191, overlap 3756177 3756180 CGCTCACGCGCCCAC CGTACGGACAACTTGTACCA TTG TGGTACAGATTATCCGTACA TCTTTCTAAGAGAGG TERM 1969 3756180 - 3756220 + H 75 -14.9 -2.70946 | opp_overlap 3756190 3756191, overlap 3756179 3756177 GCTCACGCGCCCACC GTACGGACAACTTGTACCA TTG TGGTACAGATTATCCGTAC ATCTTTCTAAGAGAG JTY_3429 3756241 - 3756516 + | hypothetical protein JTY_3430 3756513 - 3756770 + | hypothetical protein JTY_3431 3756812 - 3758002 + | putative oxidoreductase JTY_3432 3758119 - 3758487 + | hypothetical protein JTY_3433 3759035 - 3758484 - | hypothetical protein JTY_3434 3759623 - 3759042 - | putative ATP/GTP-binding protein JTY_3435 3759972 - 3759604 - | hypothetical protein JTY_3436 3760342 - 3759950 - | hypothetical protein JTY_3437 3762969 - 3760339 - | hypothetical protein spoU 3763205 - 3763669 + | putative tRNA/rRNA methylase TERM 1970 3764552 - 3764587 + G 71 -13.8 -2.82623 | overlap 3764571 GGCGGGTCGGGCGGT GCCGGCGCGGCCGGTG GCGC CGGCGGCAGCGGCGGC TGGTTGTACGGCAAC PE_PGRS51 3764036 - 3765811 + | PE-PGRS family protein JTY_3440 3766456 - 3765812 - | putative oxidoreductase JTY_3441 3766455 - 3766889 + | hypothetical protein dnaE2 3770217 - 3766978 - | error-prone DNA polymerase TERM 1971 3767052 - 3767062 + g 72 -8.2 -4.11216 | overlap 3767038 CGACGACGGTGATTG CGCC GCT GGCG TTTTGGACCTGGCCG TERM 1972 3768106 - 3768076 - G 72 -8.2 -4.07568 | CTCGGCGGCGGAAAA GCCGGCGCAGTCGA CCG CCAACTGCATCAGC TGCTCCTGAAACAGC JTY_3443 3770409 - 3771749 + | hypothetical protein otsB2 3771791 - 3772966 + | putative trehalose 6-phosphate phosphatase echA18 3773203 - 3774093 + | putative enoyl-CoA hydratase TERM 1973 3775089 - 3775062 - g 70 -4 -4.57073 | gap 1, overlap 3775063 3775064 3775077 CAGCGTTCGGAAAAA TGCGCG-CGGTCG AAA CGGCGATCGCGCA TGCCGACACCTACCC amiD 3774098 - 3775525 + | putative amidase JTY_3447 3775633 - 3776286 + | hypothetical protein JTY_3448 3777829 - 3776378 - | putative cyclase TERM 1974 3777479 - 3777490 + g 74 -5.8 -4.55118 | GATTAACTCAAACCC GACG GTTG CGTC TTTTATATCAAGTTG TERM 1975 3777542 - 3777553 + g 77 -5.8 -4.66833 | GGTAAGGTTCTTCAG GGCT AGCA AGCC TTTTTCAACTTGCGC JTY_3449 3778724 - 3777834 - | hypothetical protein TERM 1976 3778222 - 3778212 - G 71 -3.2 -4.62984 | CCACGAGATAGAAAA CTGC GCA ACAG ACTCAGCCGCATCGT TERM 1977 3778383 - 3778373 - G 74 -2.4 -4.74611 | opp_overlap 3778370 CACCATAAAAAAGAA CGTG GAC CTCG TGTTCTTTATAGAAC dxs2 3780343 - 3778733 - | 1-deoxy-D-xylulose 5-phosphate synthase TERM 1978 3780137 - 3780160 + g 70 -11 -3.57462 | GATGACACGTCGGTC GCATTGCCCC TGCA GGGCCAATGC TTTGGCGATGCCGTC TERM 1979 3780471 - 3780489 + r 70 -10.3 -3.54543 | CGACGCATCTGCACG GCCAGCT CTGGC AGCTGGC TTTCGGGCAATGCCT lytB1 3781557 - 3780568 - | putative lytB-related protein idsB 3782609 - 3781557 - | putative polyprenyl synthetase JTY_3453 3783755 - 3783363 - | hypothetical protein JTY_3454 3784063 - 3783755 - | hypothetical protein TERM 1980 3784167 - 3784214 + H 76 -10.8 -3.81951 | gap 1, overlap 3784169 3784170 3784172 TTGGCGCTGAGCTGG GAGGATGGCCTCAATGCCCTT GTTGCGG AAGGG-ATTGAGGCCATCGTG TTTCGTACTGTAGGC TERM 1981 3784169 - 3784212 + H 79 -13.4 -3.49482 | gap 1, overlap 3784167 3784170 3784172 GGCGCTGAGCTGGGA GGATGGCCTCAATGCCCTT GTTGCGG AAGGG-ATTGAGGCCATCG TGTTTCGTACTGTAG TERM 1982 3784170 - 3784211 + H 84 -16.9 -2.69207 | gap 1, overlap 3784169 3784167 3784172 GCGCTGAGCTGGGAG GATGGCCTCAATGCCCTT GTTGCGG AAGGG-ATTGAGGCCATC GTGTTTCGTACTGTA TERM 1983 3784172 - 3784209 + H 74 -13.7 -2.88215 | gap 1, overlap 3784170 3784169 3784167 GCTGAGCTGGGAGGA TGGCCTCAATGCCCTT GTTGCGG AAGGG-ATTGAGGCCA TCGTGTTTCGTACTG JTY_3455 3784212 - 3784916 + | putative transposase TERM 1984 3784973 - 3784957 - g 78 -13.7 -3.53091 | AGTGGGCGGCGCAAA GCCTGGC TAC GCCAGGC CATCAACCATCTCGA JTY_3456 3784906 - 3785583 + | putative transposase TERM 1985 3786394 - 3786450 + G 100 -23.5 -2.93073 | overlap 3786407 GCCGCCGCCATCGGC AACGCCGTCACCCCCGGCGGGGCCGGC GGC GCCGGCGGAGCCGGCGGTGACGGCGGC TGGTTGTTCGGCGAC TERM 1986 3786407 - 3786453 + G 70 -10.7 -3.61398 | gap 2, overlap 3786394 GCAACGCCGTCACCC CCGGCGGGGCCGGCGGCGCCGGC GGA GCCGGCGGTGACGG-CG-GCTGG TTGTTCGGCGACGGC TERM 1987 3786661 - 3786612 - g 100 -18.6 -4.07885 | CATCGGCGGGCAAAA CACCGAGACCGGCCCG-GCCGCCA GCAA CGGCGGCGCGGG-CGGCGCCGGTG GCGGCGGCGGGTACC TERM 1988 3786868 - 3786840 - g 83 -15.9 -3.61398 | CGGCGGGCTCAACAA CGCCGGTGGTGCC ACC GGCGGCACCGGCG GTACCGGCGGAGCCG TERM 1989 3786983 - 3786953 - g 75 -13.2 -3.38991 | overlap 3786951 ACGGCGGCAACAATA CCAGCGCCGGCACC GGT GGTGTCGGGGCTAG CGGCGGGACCGGCGG TERM 1990 3787051 - 3787002 - g 77 -13.4 -3.54424 | CGGGACCGGCGGAAA CGCCGG-GCTGATCGGCGCCGGCG GCCA CGGCGGGGCCGG-CGGCGCCGGCG GAAACCAAACCGGTG TERM 1991 3787534 - 3787563 + G 100 -22.9 -3.41878 | GGCAACGGCGGGGCC GGCGGCACCGGCG GTAA CGCCGGTGTCGCC TTGTCGGTTGGCAGC TERM 1992 3787949 - 3787984 + G 74 -14.7 -3.01712 | gap 2 CCACCCCCGGCACCG GCG-GC-GCCGGCGCCG CCGG CGGCACCGGCGGCACGC TGTTCGGCGCCCCCG PE_PGRS52 3785773 - 3788025 + | PE-PGRS family protein TERM 1993 3788040 - 3788081 + T 100 -24.1 -2.78384 | gap 1, opp_overlap 3788040 3788047, overlap 3788047 AGGCCCGCGAGCAGA CGCAAAATCGCCCAATTTCG TGC CGAA-TTGGGCGATTTTGCG TCTGCTCGGCGCAGC TERM 1994 3788081 - 3788040 - T 100 -24.1 -2.78463 | gap 1, opp_overlap 3788040 3788047, overlap 3788047 AGGCCCGCGAGCAGA CGCAAAATCGCCCAATTTCG TGC CGAA-TTGGGCGATTTTGCG TCTGCTCGGCGCAGC TERM 1995 3788074 - 3788047 - T 100 -13.6 -4.24948 | gap 1, opp_overlap 3788040 3788047, overlap 3788040 CGAGCAGACGCAAAA TCGCCCAATTTCG TGC CGAA-TTGGGCGA TTTTGCGTCTGCTCG TERM 1996 3788047 - 3788074 + T 100 -13.6 -4.24948 | gap 1, opp_overlap 3788047 3788040, overlap 3788040 CGAGCAGACGCAAAA TCGCCCAATTTCG TGC CGAA-TTGGGCGA TTTTGCGTCTGCTCG JTY_3458 3788968 - 3788096 - | putative dehydrogenase lpqD 3789042 - 3789752 + | putative lipoprotein acrA1 3789798 - 3791750 + | short chain dehydrogenase cmaA1 3792614 - 3791751 - | cyclopropane-fatty-acyl-phospholipid synthase 1 TERM 1997 3792342 - 3792359 + g 74 -5.5 -4.56597 | overlap 3792344 GCTCAGGGTCAGACC GACGACG TTGA CGTCGTA TTTTTCCACCGCGCG TERM 1998 3793477 - 3793513 + G 73 -10.9 -3.62522 | gap 1, opp_overlap 3793475, overlap 3793480 3793505 CGGGAAGCGAAATCC CAACGCGCGGATCGGC ATGAGC GTCGATCCG-GCGGTG TTCTTCGACCGGTTC iunH 3792638 - 3793564 + | putative nucleoside hydrolase JTY_3463 3795202 - 3793619 - | hypothetical protein TERM 1999 3793852 - 3793862 + g 70 -8.2 -3.91084 | TCCCCCGGCTGGTCA CCCG TAT CGGG TTTCCTTGGGCGTCA TERM 2000 3794876 - 3794865 - G 87 -7.2 -5.0538 | overlap 3794866 3794867 TCGGACCCGAAAAAA CGGG CCGG CCCG CGCACCGGCAACACC JTY_3464 3795813 - 3795199 - | hypothetical protein JTY_3465 3795896 - 3796522 + | hypothetical protein guaA 3798255 - 3796678 - | GMP synthase phyA 3799175 - 3798267 - | putative phytoene synthase TERM 2001 3798677 - 3798666 - G 70 -2.2 -4.65895 | CCGTCCATTCAAAAA GTCC TCTC GAAC GTCGCGCAGAATATT idsA1 3800283 - 3799204 - | putative multifunctional geranylgeranyl pyrophosphate synthetase JTY_3469 3800306 - 3801352 + | hypothetical protein JTY_3470 3801416 - 3802204 + | putative hydrolase JTY_3471 3802219 - 3804579 + | hypothetical protein JTY_3472 3806247 - 3805195 - | hypothetical protein JTY_3473 3808219 - 3806618 - | hypothetical protein JTY_3474 3808940 - 3808236 - | hypothetical protein TERM 2002 3809519 - 3809549 + H 81 -15.5 -3.01924 | gap 1, opp_overlap 3809515 CTCGGCGAACAGGTC GGTGGCGGCCTGCA GGAT TGC-GGCCGCTACC TCTTCCCGCCCAGTG JTY_3476 3809664 - 3810551 + | putative dioxygenase JTY_3477 3810586 - 3810885 + | hypothetical protein JTY_3478 3810882 - 3811292 + | hypothetical protein choD 3813061 - 3811325 - | putative cholesterol oxidase precursor guaB3 3814244 - 3813117 - | inosine-5-monophosphate dehydrogenase guaB2 3815853 - 3814264 - | inosine-5-monophosphate dehydrogenase JTY_3482 3816060 - 3816470 + | hypothetical protein JTY_3483 3817379 - 3816480 - | hypothetical alanine and proline rich protein TERM 2003 3816571 - 3816581 + g 76 -8.2 -4.25283 | opp_overlap 3816558 3816570, overlap 3816566 GAGGGGTCAATTGAG CCCG GCT CGGG TTTTGATGACGGCGT TERM 2004 3817128 - 3817092 - G 73 -14.3 -3.21099 | overlap 3817094 CCCGCTCAGCACCAA CAGCGCCGCGGCCACCG ACC CGACGGCCGCCAGGCTG CGACGAGCCCGTCGC TERM 2005 3817132 - 3817182 + g 80 -16.9 -2.62184 | gap 2, opp_overlap 3817094 GCCGCCAGGCTGCGA CGAGCCCGTCG-C-CGTTGCGCTAC CCC GGCGCGCAACGCGGCGACGGCCTCG TCCTGTGAAACCAGG sigD 3818010 - 3817372 - | RNA polymerase sigma factor JTY_3485 3818855 - 3818028 - | hypothetical protein TERM 2006 3818070 - 3818086 + g 75 -7.3 -4.30978 | overlap 3818072 GCGCCGCACCTGGCC TGCGCAA ATA TTGCGTA TTTTGGTGAGTTCGC whiB3 3819226 - 3819534 + | transcriptional regulatory protein whiB-like TERM 2007 3819590 - 3819549 - T 100 -25.3 -2.78463 | gap 1, opp_overlap 3819549 3819556, overlap 3819556 AGCCGCGCGAGCAGA CGCTAAAGCCCCCG-CACGC TCG GCGTGTCGGGGGCTTTTGCG TCTGCTGACCGGAGT TERM 2008 3819549 - 3819590 + T 100 -25.3 -2.78463 | gap 1, opp_overlap 3819549 3819556, overlap 3819556 AGCCGCGCGAGCAGA CGCTAAAGCCCCCG-CACGC TCG GCGTGTCGGGGGCTTTTGCG TCTGCTGACCGGAGT TERM 2009 3819583 - 3819556 - T 100 -19.2 -3.64599 | gap 1, opp_overlap 3819549 3819556, overlap 3819549 CGAGCAGACGCTAAA GCCCCCG-CACGC TCG GCGTGTCGGGGGC TTTTGCGTCTGCTGA TERM 2010 3819556 - 3819583 + T 100 -19.2 -4.24948 | gap 1, opp_overlap 3819556 3819549, overlap 3819549 CGAGCAGACGCTAAA GCCCCCG-CACGC TCG GCGTGTCGGGGGC TTTTGCGTCTGCTGA groEL 3821225 - 3819606 - | chaperonin TERM 2011 3820118 - 3820140 + g 72 -8.4 -4.11216 | opp_overlap 3820107 3820106 3820102 CAACCCCGCCGGCCA GTTTGGCCAG CCG CTCGCCAAGC TTTTCCCGATCCCAA TERM 2012 3821258 - 3821315 + r 74 -13.5 -2.86164 | gap 3, opp_overlap 3821261 3821275 3821278 GGCTAGTCCGCTAAC GCATG--CCGCCCCGGAAATCACCCGTG GTGAG CACGGG-GATCGCCGGGGCGGAACACGC TCTACTACTTGGAAA TERM 2013 3821310 - 3821261 - R 91 -20.8 -2.52676 | gap 1, opp_overlap 3821258, overlap 3821275 3821278 TAGTCCGCTAACGCA TGCCGCCCCGGAAATCACCCGTG GTGAG CACGGG-GATCGCCGGGGCGGAA CACGCTCTACTACTT groES 3821622 - 3821320 - | chaperonin gcp 3822923 - 3821889 - | putative O-sialoglycoprotein endopeptidase rimI 3823396 - 3822920 - | putative ribosomal-protein-alanine acetyltransferase JTY_3491 3824028 - 3823393 - | hypothetical protein JTY_3492 3824531 - 3824025 - | hypothetical protein TERM 2014 3824261 - 3824277 + g 71 -15.1 -2.52464 | overlap 3824249 CCATCGCCGGCGTGC CCGGCCG CCG CGGCCGG TGCATTCGCGCCAGC alr 3825754 - 3824528 - | putative alanine racemase JTY_3494 3826410 - 3826048 - | hypothetical protein TERM 2015 3826125 - 3826148 + g 70 -2.4 -4.62069 | CGCAAACCGACGGCA CACCCC TTGCACGGATGT GGGGTG TTTTTGAGATGGAGC JTY_3496 3828213 - 3827050 - | putative transposase PPE57 3826573 - 3827109 + | PPE family protein JTY_3497 3829547 - 3828702 - | putative transposase gadB 3831162 - 3829780 - | putative glutamate decarboxylase JTY_3499 3832621 - 3831200 - | hypothetical protein JTY_3500 3833336 - 3832623 - | putative transmembrane protein JTY_3501 3834201 - 3833347 - | putative transmembrane protein glmS 3836297 - 3834423 - | D-fructose-6-phosphate aminotransferase JTY_3503 3836319 - 3836795 + | putative transmembrane protein TERM 2016 3837193 - 3837240 + G 90 -18.4 -3.02144 | GCTCGGCCGCCGTGT TCGCCGCCGCCGGCTTGACCGG CACG CACGTCAAGTCCGTGGCGGCGA TATTCCCGACGGTGA JTY_3504 3836805 - 3837647 + | hypothetical protein JTY_3505 3839070 - 3837667 - | hypothetical alanine and proline rich protein JTY_3506 3839384 - 3839073 - | hypothetical protein mrsA 3840778 - 3839432 - | putative phospho-sugar mutase TERM 2017 3840362 - 3840418 + g 71 -9.3 -3.85698 | overlap 3840367 3840370 3840375 CGGCCGCAACCCGGG TCCGCGGGAGACGCCGAGGACCAGATC CTC GATCTGATCCTCGGTGTCGTCATCTAA TTTGTGGCCGCCGGG TERM 2018 3840367 - 3840413 + g 79 -16.6 -3.05997 | overlap 3840362 3840370 3840375 GCAACCCGGGTCCGC GGGAGACGCCGAGGACCAGATC CTC GATCTGATCCTCGGTGTCGTCA TCTAATTTGTGGCCG TERM 2019 3840370 - 3840410 + g 87 -19.1 -2.74598 | overlap 3840367 3840362 3840375 ACCCGGGTCCGCGGG AGACGCCGAGGACCAGATC CTC GATCTGATCCTCGGTGTCG TCATCTAATTTGTGG TERM 2020 3840375 - 3840405 + g 89 -18.4 -2.85378 | overlap 3840370 3840367 3840362 GGTCCGCGGGAGACG CCGAGGACCAGATC CTC GATCTGATCCTCGG TGTCGTCATCTAATT rpsI 3841358 - 3840903 - | 30S ribosomal protein S9 rplM 3841798 - 3841355 - | 50S ribosomal protein L13 TERM 2021 3842004 - 3841958 - R 100 -16.6 -4.14739 | opp_overlap 3841951 3841958, overlap 3841961 CCACGCAGGTCAAAA TGACTGTGTGGTCCCGACGG CTCTCCC CCGTCGGGACCACACAGGGG TCTGTTGCGCGCTCC TERM 2022 3841958 - 3842004 + r 91 -18.8 -3.07344 | opp_overlap 3841958 3841961, overlap 3841951 CCACGCAGGTCAAAA TGACTGTGTGGTCCCGACGG CTCTCCC CCGTCGGGACCACACAGGGG TCTGTTGCGCGCTCC TERM 2023 3842001 - 3841961 - R 100 -27.1 -3.09831 | opp_overlap 3841958, overlap 3841958 CGCAGGTCAAAATGA CTGTGTGGTCCCGACGG CTCTCCC CCGTCGGGACCACACAG GGGTCTGTTGCGCGC esxT 3842333 - 3842031 - | hypothetical protein esxU 3842731 - 3842354 - | hypothetical protein JTY_3512 3843938 - 3842724 - | hypothetical alanine and valine rich protein TERM 2024 3842992 - 3843008 + g 74 -12.3 -3.50393 | GTGCCAGGCAGCGTC TCACCGG GAA CCGGTGA TTGTGTGACGTGCAA JTY_3513 3847645 - 3843935 - | hypothetical protein TERM 2025 3847140 - 3847098 - G 70 -8.3 -3.90112 | gap 2, overlap 3847101 TGTGCGGCAAGGAAA CAGCGCAGC--GCGGCGCGGG TGA CCGGATCCGCACGCTGCGCCG GCGGAAGCTGCCCGA TERM 2026 3848964 - 3849003 + G 77 -5.6 -4.67904 | gap 1, overlap 3848966 GGAACACGGGCCGTG GATTGCCGCGCTGACC-GC CAT GCTGGCCGCCGTGGCAATG TTTTTGGGCTTCGTC TERM 2027 3848966 - 3849001 + G 70 -8.2 -3.94933 | gap 1, overlap 3848964 AACACGGGCCGTGGA TTGCCGCGCTGACC-GC CAT GCTGGCCGCCGTGGCAA TGTTTTTGGGCTTCG JTY_3514 3847759 - 3849162 + | putative integral membrane protein JTY_3515 3849159 - 3850526 + | putative secreted serine protease JTY_3516 3851903 - 3850491 - | hypothetical protein cut3 3852024 - 3852812 + | putative cutinase precursor TERM 2028 3852925 - 3852957 + G 86 -17 -3.33696 | gap 1, overlap 3852927 3852927 3852927 CGCCGCCTCACCAGC CTG-GTGGCCGCCGC CTTT GCGGCGGCCACACTG TTGCTTACCCCCGCG TERM 2029 3852927 - 3852955 + G 89 -18.2 -3.23853 | gap 1, overlap 3852925 3852927 3852927 CCGCCTCACCAGCCT G-GTGGCCGCCGC CTTT GCGGCGGCCACAC TGTTGCTTACCCCCG TERM 2030 3852927 - 3852954 + G 87 -18.4 -2.54098 | overlap 3852927 3852925 3852927 CCGCCTCACCAGCCT GGTGGCCGCCGC CTTT GCGGCGGCCACA CTGTTGCTTACCCCC cut4 3852859 - 3853539 + | putative cutinase precursor JTY_3519 3853811 - 3855496 + | putative transmembrane protein truA 3856228 - 3855458 - | tRNA pseudouridine synthase A rplQ 3856838 - 3856296 - | 50S ribosomal protein L17 rpoA 3857913 - 3856870 - | DNA-directed RNA polymerase subunit alpha TERM 2031 3857961 - 3858018 + r 91 -18.5 -3.17392 | gap 2 TGACGTCTGTGGGGG CACTCG-GGGGCGGCGC-CCCCGAG GGTGGGGGTA CTCGGGGGGCGGCGCCCCCCGAGGG TTGGGTTGGGGGGTA rpsD 3858669 - 3858064 - | 30S ribosomal protein S4 rpsK 3859097 - 3858678 - | 30S ribosomal protein S11 rpsM 3859475 - 3859101 - | 30S ribosomal protein S13 rpmJ 3859804 - 3859691 - | 50S ribosomal protein L36 infA 3860058 - 3859837 - | translation initiation factor IF-1 TERM 2032 3860579 - 3860596 + G 77 -10.5 -3.98661 | TTCCACCGCATCGAG GCGGCCT ACCC GGGCCGC TTTCTGCTGGGTATC JTY_3528 3860312 - 3861169 + | hypothetical protein rmlB1 3861242 - 3862237 + | putative dTDP-glucose 4,6-dehydratase rmlC 3862239 - 3862847 + | putative dTDP-4-dehydrorhamnose 3,5-epimerase TERM 2033 3863312 - 3863338 + GF 74 -5 -4.57073 | overlap 3863313 AGGGCCTGATCGGCG AGGCGCACATCA AAG TGATTCGCGCCC TTTTTCGCCCACCTG JTY_3531 3862930 - 3863598 + | hypothetical protein TERM 2034 3863865 - 3863835 - gT 77 -12.5 -3.57792 | TGACCGACCTGCAAA CCGGCGCCGGCAA GGGCT TCACCGGCGGCGG CACCCTGCTACCCAT TERM 2035 3864191 - 3864179 - gT 71 -3.3 -4.57569 | overlap 3864180 CGACTCGCCGAAAAA GGCTG GAC CACCC GCAAAAACACCCACG JTY_3532 3863369 - 3864322 + | hypothetical protein rmlB2 3865474 - 3864380 - | putative dTDP-glucose 4,6-dehydratase TERM 2036 3864652 - 3864609 - G 71 -13.8 -2.87132 | gap 1, overlap 3864594 3864640 CGCTGGGTCCACACA GCCGCGGCCAGCGGTACCCGC CGG GCGAACACCGAT-GCCGCGTC GGTGCGCAGCTGCGT mhpE 3866488 - 3865478 - | 4-hydroxy-2-oxovalerate aldolase TERM 2037 3865511 - 3865542 + g 81 -10.9 -4.13014 | gap 1 GACCACTCGATCGAT GTCTTGCGGGGACA ACCAC TG-CCCCGCATGAC TTTTCGCGGTCTGCC ilvB2 3868207 - 3866549 - | putative acetolactate synthase large subunit TERM 2038 3867195 - 3867179 - G 72 -5.8 -4.3739 | gap 1 CACCCTCCGACAAAA GCGTGGC GGCC GCC-CGC AGTTCAGGGCATTGA JTY_3536 3868746 - 3868213 - | hypothetical protein JTY_3537 3868767 - 3869273 + | hypothetical protein bpoA 3870138 - 3869353 - | putative peroxidase kgtP 3871767 - 3870418 - | putative dicarboxylic acid transport integral membrane protein TERM 2039 3870746 - 3870736 - G 72 -6.8 -4.23674 | GGCCACCAATAGAAA CGAC ATT GTCG GCGAACGTGTTTCGG TERM 2040 3871323 - 3871294 - G 74 -12.7 -3.49924 | overlap 3871285 3871297 CTGAAACGACGAGAA GTAGCCGCGCCGC TCCC GCGTCGCGGCCTC AGACATGTACGTCAC TERM 2041 3871320 - 3871297 - G 73 -15.2 -2.88358 | overlap 3871285 3871294 AAACGACGAGAAGTA GCCGCGCCGC TCCC GCGTCGCGGC CTCAGACATGTACGT PE31 3872140 - 3872436 + | PE family protein TERM 2042 3873327 - 3873371 + G 70 -10 -3.66844 | gap 1, overlap 3873331 GGCGGAAAACGGGGT CTGGGCGATGAGCTC-GCTGG GCAG CCAGCTGGGTTCGTCGCTGGG TTCTTCGGGTCTGGG PPE60 3872473 - 3873654 + | PE family protein TERM 2043 3873805 - 3873788 - f 72 -7.7 -4.14243 | GATGGCATTCGAAAA GCCGTCA CCGG TAACGGC ATTGACGCAGGAACT TERM 2044 3874200 - 3874180 - g 79 -4.6 -4.77165 | CGCGGGACAAGAAAA CACCGTCC CTCTT GTACGGCG ACGAACGCATATTCG TERM 2045 3874779 - 3874751 - g 86 -16.8 -3.34043 | GCCACCACCGGACAA CGTCGACGAGCC ACTCG GGCTCATCGACG GGCTGCTGAAGGGCC JTY_3542 3873867 - 3875168 + | hypothetical protein TERM 2046 3875686 - 3875652 - g 75 -7 -4.4078 | overlap 3875657 TCTGCTGAACGAAAA TCCAATCGCAGGCGAA ACA TTCGCCAGCGACAAGG GCTCACCACTGATGG TERM 2047 3875681 - 3875657 - g 77 -14.3 -3.41708 | overlap 3875652 TGAACGAAAATCCAA TCGCAGGCGAA ACA TTCGCCAGCGA CAAGGGCTCACCACT TERM 2048 3875957 - 3876004 + G 71 -3.3 -4.63928 | gap 2 TCGCGGCCGGGACTG GGGGCTTGCTGGTCGTCCTAGGC ACTT GGC-AGGTCT-CCGGCAGGCTCC TTTTTGCACTGCTGT JTY_3543 3875173 - 3876219 + | hypothetical protein JTY_3544 3877736 - 3876243 - | hypothetical protein JTY_3545 3878516 - 3877827 - | putative integral membrane protein JTY_3546 3879441 - 3877951 - | hypothetical protein JTY_3547 3880147 - 3879485 - | hypothetical protein cpsA 3880413 - 3881951 + | hypothetical protein JTY_3549 3882901 - 3881957 - | short chain dehydrogenase TERM 2049 3883550 - 3883530 - g 72 -11.8 -3.55563 | AGGCGACTGTCCAAA CGCGCCAC GGCTT GCGGCGCG AGGTGAACCCGCGAC JTY_3550 3883107 - 3883556 + | hypothetical protein lipF 3884342 - 3883509 - | putative esterase/lipase JTY_3552 3885002 - 3885325 + | hypothetical protein JTY_3553 3885407 - 3885571 + | hypothetical protein TERM 2050 3886100 - 3886115 + G 82 -4.7 -4.86385 | TGCGCATGCTGCGGC CCGAT CTGACC ATCGG TTTCTTTTTGCACAT TERM 2051 3886193 - 3886241 + G 71 -9.5 -3.81287 | gap 1, overlap 3886190 AGATCATCCAGGGCC TACTGGGCGCCGACCTGGTGGG CTTCCA TCTTCCGGG-CGGTGCCCAGAA TTTCCTGATCCTGTC otsA 3885571 - 3887073 + | putative alpha,alpha-trehalose-phosphate synthase TERM 2052 3887144 - 3887103 - f 100 -25.5 -2.78384 | gap 1, opp_overlap 3887103 3887110, overlap 3887110 CCGCTCGCGAGCAGA CGCAGAATCGCCC-ATTTCG GCA CGAAATTGGGCGATTCTGCG TCTGCTCGCGCCCTG TERM 2053 3887103 - 3887144 + F 100 -25.5 -2.78596 | gap 1, opp_overlap 3887103 3887110, overlap 3887110 CCGCTCGCGAGCAGA CGCAGAATCGCCC-ATTTCG GCA CGAAATTGGGCGATTCTGCG TCTGCTCGCGCCCTG TERM 2054 3887110 - 3887137 + F 79 -13.6 -3.40299 | gap 1, opp_overlap 3887110 3887103, overlap 3887103 CGAGCAGACGCAGAA TCGCCC-ATTTCG GCA CGAAATTGGGCGA TTCTGCGTCTGCTCG TERM 2055 3887137 - 3887110 - f 79 -13.6 -3.40299 | gap 1, opp_overlap 3887103 3887110, overlap 3887103 CGAGCAGACGCAGAA TCGCCC-ATTTCG GCA CGAAATTGGGCGA TTCTGCGTCTGCTCG JTY_3555 3887225 - 3887803 + | hypothetical protein JTY_3556 3888282 - 3887800 - | hypothetical MCE associated protein JTY_3557 3889010 - 3888282 - | hypothetical MCE associated alanine and valine rich protein TERM 2056 3888810 - 3888773 - G 75 -12 -3.64703 | gap 1, opp_overlap 3888801 CTGCCGCCAGCGAAA GCCA-GCCGACCAGGAC GCGGT GTGCCGGCCGGCGTGGC GGCGGTTTGACCGGC mce4F 3890704 - 3889010 - | MCE-family protein TERM 2057 3890657 - 3890627 - G 72 -4.6 -4.56358 | overlap 3890629 3890630 CAGACGCAGATAAAA GATCGCCATCACGC TCA GGGTGATGACGGTG ATCACCGCAAAAATG lprN 3891869 - 3890715 - | putative MCE-family lipoprotein mce4D 3893221 - 3891866 - | MCE-family protein mce4C 3894291 - 3893218 - | MCE-family protein mce4B 3895333 - 3894281 - | MCE-family protein mce4A 3896535 - 3895333 - | MCE-family protein TERM 2058 3896540 - 3896551 + r 72 -4.4 -4.56597 | CCGCCGGACATGTTT CCTT TCTG AAGG TTTTTACCCCGAGAG yrbE4B 3897397 - 3896555 - | hypothetical integral membrane protein TERM 2059 3897105 - 3897083 - G 81 -7.6 -4.59773 | overlap 3897068 GCGGACGTTCAAAAA CGCCGACAGG AAC CCGGTCAACG CCTCGATACCGATGT TERM 2060 3897194 - 3897179 - G 73 -3.9 -4.59773 | CGCCAGGGTCAAAAA GGCCG CCACCC CGACC GTGCCGCCGATCATG TERM 2061 3897376 - 3897366 - G 75 -4.6 -4.65263 | AGCCGCGAAAAGAAA CGGC GAA ACCG GATAGTGACGTCGTA yrbE4A 3898196 - 3897432 - | hypothetical integral membrane protein fabG 3899375 - 3898422 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 2062 3898788 - 3898833 + g 80 -16.8 -2.73364 | opp_overlap 3898766 3898767 GCGCCCGAGCGCCCG CGCCGCCGACAGGGTTAGCG CGGTGA TGCCAGCCTTGGCGGCGGCG TAATTCGCCTGCCCC fdxD 3899591 - 3899400 - | putative ferredoxin TERM 2063 3900378 - 3900361 - g 81 -4.1 -5.00616 | opp_overlap 3900361, overlap 3900336 TCTGGGGCCAAAAAA CACCG TGGCATAT CGGTG TTAATCGTGCCGACG fadE26 3899806 - 3901008 + | putative acyl-CoA dehydrogenase fadE27 3901033 - 3902154 + | putative acyl-CoA dehydrogenase TERM 2064 3902626 - 3902649 + G 74 -8 -4.18018 | GACCGACGAGGTGGC CGCACACCGG GATA CCGAGGTGCG TTTTCGATCCGCGGA fadD17 3902225 - 3903733 + | acyl-CoA synthetase TERM 2065 3904041 - 3903990 - g 100 -20 -4.25104 | opp_overlap 3904001 3904019 3904022 3904024 3904025 GCTGGCCCACGAAAA CGCGTCGGCGGCCGCTTCGACGAC GGCG GTGGTCTCCGCGGCCGCCGACGAG GTATCGACGGCGGTC TERM 2066 3904024 - 3904061 + G 76 -14.7 -3.17146 | opp_overlap 3903990, overlap 3904022 3904019 3904025 ACGACGGCGGTGGTC TCCGCGGCCGCCGACGA GGTA TCGACGGCGGTCGCCGC TCTGTTCTCCCAACA TERM 2067 3904025 - 3904060 + G 85 -18.2 -2.50074 | opp_overlap 3903990, overlap 3904024 3904022 3904019 CGACGGCGGTGGTCT CCGCGGCCGCCGACGA GGTA TCGACGGCGGTCGCCG CTCTGTTCTCCCAAC TERM 2068 3904702 - 3904760 + G 89 -18.7 -2.82895 | gap 2, overlap 3904717 ATCGGTGGCCAGGGT --ACCGGCGCCGGCGGTGCCGCCGGCGCC GGC GGCACCGGGGGCAACGGCGGCGCCGGGGG GTTGTTCATGAACGG TERM 2069 3904717 - 3904761 + G 77 -12.5 -3.71848 | overlap 3904702 ACCGGCGCCGGCGGT GCCGCCGGCGCCGGCGGCACC GGG GGCAACGGCGGCGCCGGGGGG TTGTTCATGAACGGC TERM 2070 3905244 - 3905197 - g 77 -13.5 -3.53811 | gap 3, overlap 3905198 GGCACCGGCGGCAAA GGTGGCACCGGCG--GT-GCCGGC GGC GCCGGCAACGACGCCGGCAGCACC GGCAATCCCGGCGGT TERM 2071 3905253 - 3905198 - g 72 -14.7 -2.72144 | gap 2, overlap 3905197 GCACCGGCGGCAAAG GTGGCACCGGCGGTGCCGGCGGCGCCG GCAA CGACGCCGGCAGCACCGGCAAT-CC-C GGCGGTAAGGGCGGC TERM 2072 3906721 - 3906663 - g 73 -14.2 -3.12351 | overlap 3906699 3906700 CTTGCCCACACCCAA CGGCGGGGCCGGTGGCAACGGTGGCACC GGA AGCAACGGCGGCGCGCCCGGCCCCGCCG GGGCGCCCGGCCCCA TERM 2073 3906731 - 3906699 - g 75 -13.4 -3.35813 | gap 2, overlap 3906663 3906700 TGGCACCGGAAGCAA CGGCGGCGCGCCCGGC CCC GCCGGG-GCGCC-CGG CCCCACTACCGGCGG TERM 2074 3906733 - 3906700 - g 74 -15.9 -2.61274 | gap 1, overlap 3906663 3906699 GGCACCGGAAGCAAC GGCGGCGCG-CCCGGC CCC GCCGGGGCGCCCGGCC CCACTACCGGCGGTA TERM 2075 3907377 - 3907333 - g 90 -17.7 -3.53012 | overlap 3907281 3907352 TCGGCCGGCGGGAAA GGCGGCGACGGCGGCAACATC GCC GCCGGTGCCACCGGCACCGCC GGCAACGGCGGGAAC TERM 2076 3907409 - 3907352 - g 100 -25.5 -3.02511 | overlap 3907333 GCGACGGCGGCAACA TCGCCGCCGGTGCCACCGGCACCGCCG GCAA CGGCGGGAACGGCGGCAACGGCAACGA CGGCGCCGTCAACGC PE_PGRS53 3903904 - 3908022 + | PE-PGRS family protein TERM 2077 3908742 - 3908786 + G 100 -19.2 -3.28712 | gap 1, overlap 3908743 GGCGGGGCCGGGGCA GCCGGGGCGCCCGGCCAGGCC GGCG GGCCTGGC-GGGCCCGCCGGA TTGTGGGGCAACGGC TERM 2078 3908743 - 3908785 + G 100 -22.7 -2.57132 | gap 1, overlap 3908742 GCGGGGCCGGGGCAG CCGGGGCGCCCGGCCAGGCC GGCG GGCCTGGC-GGGCCCGCCGG ATTGTGGGGCAACGG TERM 2079 3908986 - 3909021 + G 74 -14.6 -3.01712 | gap 1 TCGGTGGGGCCGGTG GCGGCACCGGCGGGGCC GGC GGCCGCGCCGA-GCTGC TGTTCGGCGCCGGCG TERM 2080 3909399 - 3909435 + G 70 -13 -3.01712 | gap 2 GGTGTCGGCGGCGTG GCTGGCCTCGGCGGGGCC GGT GGTGCCGC-G-GGCCAGC TCTTCAGCGCCGGAG TERM 2081 3909743 - 3909798 + G 73 -13.6 -3.28712 | opp_overlap 3909790, overlap 3909744 GGGTGGGACTGGCGG TAACGCCGGCGCCGGCGGGGCCGGCG GGGC CGCCGGCACCGGAGGAACCGGCGGGG TTGTCGGCGCCGCGG TERM 2082 3909744 - 3909797 + G 71 -14.9 -2.57132 | opp_overlap 3909790, overlap 3909743 GGTGGGACTGGCGGT AACGCCGGCGCCGGCGGGGCCGGCG GGGC CGCCGGCACCGGAGGAACCGGCGGG GTTGTCGGCGCCGCG TERM 2083 3910104 - 3910049 - g 100 -20.2 -3.28712 | overlap 3910050 TGTTGGCGCCGACAA CCCCACCGGCATCGGCGGCGCCGGCG GCAC CGGCGGCGCCGGCGGCACCGGCGGCA CCGGCGGAGCGGCCG TERM 2084 3910103 - 3910050 - g 100 -21.5 -2.57132 | overlap 3910049 GTTGGCGCCGACAAC CCCACCGGCATCGGCGGCGCCGGCG GCAC CGGCGGCGCCGGCGGCACCGGCGGC ACCGGCGGAGCGGCC TERM 2085 3910250 - 3910215 - g 77 -13.1 -3.53811 | overlap 3910191 GGCACCGGCGGGAAA GGCGGCGCCGGCGGC GCGGGT GGCGCCGGCGCGGAC GCGACCGCTACCGGC TERM 2086 3910694 - 3910749 + G 100 -26 -3.28712 | gap 1 CGGCGGCACAGGTGG CGCGGCCGGCGCCGGCGGGGCCGG-CG GGG CGACCGGTACCGGCGGCACCGGCGGCG TTGTCGGCGCCACCG TERM 2087 3912035 - 3911978 - g 72 -13.1 -3.14132 | gap 1 CGCCGGCGGCATCAA CGGGGCCGGCGGGGCCGGCGGCACCGGC GGG GCCGGTGGTGACGGCGCC-CCGGCGACC CTGATCGGCGGACCC TERM 2088 3912463 - 3912412 - g 82 -17 -3.01712 | GCGGCCTGGCCAACA CCGGCGGAACCGCGGGCAACGCCG GTAT CGGCGGGGCCGGCGGCCGCGGCGG CGACGGCGGGGCCGG TERM 2089 3912626 - 3912575 - g 86 -17.8 -3.14132 | gap 1 CGCCGGCGGCATCAA CGGGGCCGGCGGCACCGGCGGCACC GGC GGGGCCGGTGGTGACGGCG-CCCCG GCGACCCTGATCGGC TERM 2090 3913060 - 3913009 - g 82 -17 -3.01712 | GCGGCCTGGCCAACA CCGGCGGAACCGCGGGCAACGCCG GTAT CGGCGGGGCCGGCGGCCGCGGCGG CGACGGCGGGGCCGG TERM 2091 3913684 - 3913633 - g 82 -17 -3.01712 | GCGGCCTGGCCAACA CCGGCGGAACCGCGGGCAACGCCG GTAT CGGCGGGGCCGGCGGCCGCGGCGG CGACGGCGGGGCCGG TERM 2092 3913847 - 3913796 - g 86 -17.8 -3.14132 | gap 1 CGCCGGCGGCATCAA CGGGGCCGGCGGCACCGGCGGCACC GGC GGGGCCGGTGGTGACGGCG-CCCCG GCGACCCTGATCGGC PE_PGRS54 3908313 - 3914465 + | PE-PGRS family protein ilvX 3916179 - 3914632 - | hypothetical protein TERM 2093 3915021 - 3914979 - G 78 -15 -3.25102 | gap 4, overlap 3914977 ATTCCAGGCACAACA CCGG--GCGGTCGG-G-CGCGG CGA CCGCGGCACCGACCGCAGCCGG GATGCCGTAACCGAT TERM 2094 3915371 - 3915361 - G 70 -2.4 -4.62069 | overlap 3915366 CGGGTAGGCGAAAAA CGAC ACC GGCG ACCTGGCCCCGGCCA JTY_3574 3917012 - 3916176 - | hypothetical protein TERM 2095 3917220 - 3917230 + H 74 -4.6 -4.59773 | overlap 3917208 3917218 CGTTCGTGGCCACGC GGTG CTT CGCC TTTTTGCCCATCCCA TERM 2096 3917514 - 3917533 + G 74 -10 -3.88498 | gap 1, overlap 3917491 3917491 GCGCCGATGAGGTGT CAGCG-CGC ATC GCGGCGCTG TTTGGTATGTACGGC TERM 2097 3918754 - 3918795 + G 75 -15.7 -2.77344 | gap 1, overlap 3918754 CGGCACCGGCGGTGA CGGC-GGCGCCCCCGGCAAC GGT GGCGCCGGGGGTGCCGGCCA GTTGTTGAGCCATAG TERM 2098 3918754 - 3918796 + G 85 -15.5 -3.62597 | gap 2, overlap 3918754 CGGCACCGGCGGTGA C-GGC-GGCGCCCCCGGCAAC GGT GGCGCCGGGGGTGCCGGCCAG TTGTTGAGCCATAGC TERM 2099 3919271 - 3919219 - g 95 -18.9 -3.49668 | overlap 3919207 3919221 3919222 3919224 3919247 AAACGGCGCAGACAA CACCACCACCGCCGCCGCCGGCACC ACA GGCGGCGACGGCGGGGCCGGCGGGG CCGGCGGAACCGGCG TERM 2100 3919269 - 3919221 - g 100 -20.1 -3.31905 | overlap 3919207 3919219 3919222 3919224 3919247 ACGGCGCAGACAACA CCACCACCGCCGCCGCCGGCACC ACA GGCGGCGACGGCGGGGCCGGCGG GGCCGGCGGAACCGG TERM 2101 3919262 - 3919222 - g 95 -20.3 -2.58822 | overlap 3919207 3919221 3919219 3919224 3919247 CGGCGCAGACAACAC CACCACCGCCGCCGCCGGC ACC ACAGGCGGCGACGGCGGGG CCGGCGGGGCCGGCG TERM 2102 3919278 - 3919224 - g 100 -22.6 -2.83249 | overlap 3919222 3919207 3919221 3919219 3919247 GCGCAGACAACACCA CCACCGCCGCCGCCGGCACCACAGGC GGC GACGGCGGGGCCGGCGGGGCCGGCGG AACCGGCGGAACCGG TERM 2103 3919303 - 3919247 - g 72 -14.7 -2.78384 | overlap 3919222 3919207 3919221 3919219 3919224 GCCGCCGGCACCACA GGCGGCGACGGCGGGGCCGGCGGGGCC GGC GGAACCGGCGGAACCGGCGGAGCCGCC GGCACCGGCACCGGC TERM 2104 3919616 - 3919564 - g 95 -18.9 -3.49668 | overlap 3919552 3919566 3919567 3919569 3919592 AAACGGCGCAGACAA CACCACCACCGCCGCCGCCGGCACC ACA GGCGGCGACGGCGGGGCCGGCGGGG CCGGCGGAACCGGCG TERM 2105 3919614 - 3919566 - g 100 -20.1 -3.31905 | overlap 3919552 3919564 3919567 3919569 3919592 ACGGCGCAGACAACA CCACCACCGCCGCCGCCGGCACC ACA GGCGGCGACGGCGGGGCCGGCGG GGCCGGCGGAACCGG TERM 2106 3919607 - 3919567 - g 95 -20.3 -2.58822 | overlap 3919552 3919566 3919564 3919569 3919592 CGGCGCAGACAACAC CACCACCGCCGCCGCCGGC ACC ACAGGCGGCGACGGCGGGG CCGGCGGGGCCGGCG TERM 2107 3919623 - 3919569 - g 100 -22.6 -2.83249 | overlap 3919567 3919552 3919566 3919564 3919592 GCGCAGACAACACCA CCACCGCCGCCGCCGGCACCACAGGC GGC GACGGCGGGGCCGGCGGGGCCGGCGG AACCGGCGGAACCGG TERM 2108 3919648 - 3919592 - g 72 -14.7 -2.78384 | overlap 3919567 3919552 3919566 3919564 3919569 GCCGCCGGCACCACA GGCGGCGACGGCGGGGCCGGCGGGGCC GGC GGAACCGGCGGAACCGGCGGAGCCGCC GGCACCGGCACCGGC TERM 2109 3920483 - 3920452 - g 81 -16.6 -3.14132 | overlap 3920422 3920423 TGCCGCGGGCAGCAA CGGCGGTACCGTCG GCGC CAACGGTACCGGCG GCGACGGCGGCAACG TERM 2110 3920930 - 3920872 - g 86 -17.8 -3.18264 | CTCCTCAGCTACCAA CGGCGGCAGCGGCGGCGCCGGCGGCACC GGA GGCGCCGGCGGCACCGGCGGCGCTGGTG GCGATGGCGTCGGCG TERM 2111 3921222 - 3921165 - g 100 -24.1 -3.03159 | gap 1, overlap 3921168 GCAACGGCGGCAATA TCACCGGCGGCACCGCGGGCACCG-CGG GGG CCGCCGGTAACGGCGGCGCCGCCGGAAA GGGTGGCGCCGGCGG TERM 2112 3921219 - 3921168 - g 100 -28 -2.73994 | gap 1, overlap 3921165 ACGGCGGCAATATCA CCGGCGGCACCGCGGGCACCG-CGG GGG CCGCCGGTAACGGCGGCGCCGCCGG AAAGGGTGGCGCCGG PE_PGRS55 3917372 - 3922459 + | PE-PGRS family protein fadD18 3923244 - 3922588 - | putative fatty-acid-CoA ligase TERM 2113 3923852 - 3923887 + G 74 -14.6 -3.01712 | gap 1 TCGGTGGGGCCGGTG GCGGCACCGGCGGGGCC GGC GGCCGCGCCGA-GCTGC TGTTCGGCGCCGGCG TERM 2114 3924613 - 3924567 - g 82 -16.4 -3.28712 | overlap 3924529 GGCCGGCGCCGATAA CCCCACCGGCATCGGCGGCACC GGC GGTGACGGCGGCACCGGCGGAG CGGCCGGAGCCGGCG TERM 2115 3924964 - 3924918 - g 82 -16.4 -3.28712 | overlap 3924880 GGCCGGCGCCGATAA CCCCACCGGCATCGGCGGCACC GGC GGTGACGGCGGCACCGGCGGAG CGGCCGGAGCCGGCG PE_PGRS57 3923290 - 3925359 + | PE-PGRS family protein TERM 2116 3925610 - 3925564 - f 88 -16.4 -3.28712 | overlap 3925526 GGCCGGCGCCGATAA CCCCACCGGCATCGGCGGCACC GGC GGTGACGGCGGCACCGGCGGAG CGGCCGGAGCCGGCG TERM 2117 3926029 - 3925979 - g 77 -16.6 -2.52676 | overlap 3926006 3926007 GACGGCGGCAACGCA GGCACCGGCGCCGGCGACCCCGGC AAA GGCGGCACCGGCGGCACCGGCGGC AGCGGCGGGGCCGGC TERM 2118 3926053 - 3926006 - g 81 -14.6 -3.54424 | overlap 3925979 3926007 GGCGACCCCGGCAAA GGCGGCACCGGCGGCACCGGCG GCAG CGGCGGGGCCGGCGGTAGCGGC GGGGCCAACTTCAAC TERM 2119 3926053 - 3926007 - g 75 -15.7 -2.72511 | gap 1, overlap 3925979 3926006 GCGACCCCGGCAAAG GCGGC-ACCGGCGGCACCGGCG GCAG CGGCGGGGCCGGCGGTAGCGGC GGGGCCAACTTCAAC PE_PGRS57 3925664 - 3926518 + | PE-PGRS family protein fadD19 3928725 - 3927079 - | acyl-CoA synthetase echA19 3928799 - 3929590 + | enoyl-CoA hydratase JTY_3581 3929686 - 3930525 + | hypothetical protein cyp142b 3931161 - 3930580 - | putative cytochrome P450 monooxygenase 142 cyp142a 3931775 - 3931158 - | putative cytochrome P450 monooxygenase 142 JTY_3584 3931804 - 3932514 + | hypothetical protein JTY_3585 3933622 - 3932579 - | putative coenzyme F420-dependent oxidoreductase JTY_3586 3933775 - 3934686 + | hypothetical protein TERM 2120 3935267 - 3935277 + G 83 -4.6 -5.03314 | overlap 3935265 CCGTCGGGGAACTGC TGGC ACG GCCG TTTTTTGCCGATCCG JTY_3587 3934702 - 3935766 + | hypothetical protein JTY_3588 3935783 - 3936967 + | acetyl-CoA acetyltransferase TERM 2121 3936989 - 3936968 - f 74 -13 -3.31461 | overlap 3936953 CAGGCAGCCGCATAA TCGCCCGG CGCGAT CCGGGCGA CGCCGCAGACCATCC JTY_3589 3937009 - 3938040 + | hypothetical protein JTY_3590 3938578 - 3938054 - | putative siderophore-binding protein TERM 2122 3939062 - 3939024 - g 70 -11.7 -3.39327 | gap 1, opp_overlap 3939021 3939019 3939018 3939058, overlap 3939025 GGCGCACACCCAGAA TGGCGCGCAC-TCGGTCG TGGA CGACCGATGTGCGCAGCG GGCTGCTGTTTGTCT TERM 2123 3939061 - 3939025 - g 71 -15.2 -2.63382 | gap 1, opp_overlap 3939021 3939019 3939018 3939058, overlap 3939024 GCGCACACCCAGAAT GGCGCGCAC-TCGGTCG TGGA CGACCGATGTGCGCAGC GGGCTGCTGTTTGTC TERM 2124 3939727 - 3939695 - g 72 -12.9 -3.14132 | overlap 3939697 CGCCGCTGGTATGAA CAGTTTTATGTCGAC GTA GCCGACATAAAACCA GAGATGGTGGAGCGC TERM 2125 3939725 - 3939697 - g 78 -15.5 -3.13403 | overlap 3939695 CCGCTGGTATGAACA GTTTTATGTCGAC GTA GCCGACATAAAAC CAGAGATGGTGGAGC JTY_3591 3938693 - 3939853 + | putative oxidoreductase JTY_3592 3939859 - 3940308 + | hypothetical protein TERM 2126 3940319 - 3940373 + T 76 -10.5 -3.86194 | gap 1 GATAACGTCGCACAC CCGCTTGCCGCGG-GATACGGTGCCG CATC CGGCACGGTGCCACCGAGGCGTACGG TTTGTGACGGCGGTT JTY_3593 3941446 - 3940733 - | hypothetical protein TERM 2127 3940889 - 3940916 + g 76 -2.6 -4.90296 | gap 1 GATGTCTGGTATATC GCGCCACGGCTTG TCA TGATCCG-GGTGC TTTTTATCGAGTTTT TERM 2128 3941596 - 3941621 + r 100 -15.5 -4.36729 | gap 1 GATTGCCAGTCACGG GACCA-CGGCGC GCC GCGCCGGTGGTC TTTTCGCTTATTCGT TERM 2129 3941985 - 3941948 - R 70 -12.1 -3.14132 | gap 1 GCGGCGTGGGAGCAA CTGC-TGGGGGTAGCGAA CTG TTCACTACCCCCTGGCAA TCAGGTGGTCCCGTC JTY_3594 3943292 - 3942138 - | hypothetical protein JTY_3595 3944074 - 3943292 - | short chain dehydrogenase JTY_3596 3945198 - 3944071 - | hypothetical protein TERM 2130 3946186 - 3946150 - g 70 -10.7 -3.53012 | overlap 3946127 3946162 GTCTGCCGGCGCAAA GCGCCGAAGTCAGCCGC GCG ACCGCCAACGCCGGCGC CGCCGACGGCAACTG PPE61 3945597 - 3946817 + | PPE family protein PPE62 3948707 - 3946959 - | PPE family protein JTY_3599 3949846 - 3948806 - | 4-hydroxy-2-oxovalerate aldolase TERM 2131 3949605 - 3949595 - G 76 -2.4 -4.87626 | overlap 3949596 GGGCAACATCAAAAA CGCG ATC CGGG CCTCTTTCGCGGTCG JTY_3600 3950754 - 3949843 - | acetaldehyde dehydrogenase JTY_3601 3951550 - 3950765 - | putative hydratase JTY_3602 3951623 - 3953314 + | 3-ketosteroid-delta-1-dehydrogenase JTY_3603 3953316 - 3954176 + | putative dehydrogenase TERM 2132 3954659 - 3954610 - g 72 -13.5 -3.14132 | gap 1, opp_overlap 3954636 GCGCTGGCCTATGAA GCGGCGTTCGCCGCAACCGTACAC CCG GCGCT-GGTCGCGGCGAACCGCGC CCTCGTGGCCTGGTT PPE63 3954313 - 3955752 + | PPE family protein ltp2 3956913 - 3955753 - | lipid-transfer protein JTY_3606 3957302 - 3956913 - | hypothetical protein JTY_3607 3958234 - 3957299 - | hypothetical protein TERM 2133 3957663 - 3957650 - G 93 -9.5 -4.85599 | TCCATCCCAGAAAAA CGCGG TGTC CCGCG ACGACGAGGGACGCA fadE29 3959394 - 3958231 - | putative acyl-CoA dehydrogenase fadE28 3960398 - 3959379 - | putative acyl-CoA dehydrogenase cyp125 3961699 - 3960398 - | putative cytochrome P450 125 TERM 2134 3961406 - 3961418 + g 70 -6.2 -4.2828 | GTCGTTCTTGAATCG CGGG ATCAC CCCG TTTTCGTAGCTGGAG TERM 2135 3962041 - 3962017 - g 77 -12.1 -3.74526 | opp_overlap 3962032 GGAGCAATCCAACAA CATCAGCCGGG TGG CCTGGCTGACG GCCGGTTTGCCCGAA fadA5 3961811 - 3962986 + | acetyl-CoA acetyltransferase JTY_3612 3963098 - 3963553 + | hypothetical protein JTY_3613 3964550 - 3963636 - | short chain dehydrogenase JTY_3614 3965352 - 3964573 - | short chain dehydrogenase echA20 3965407 - 3966150 + | enoyl-CoA hydratase JTY_3616 3966150 - 3967028 + | putative CoA-transferase subunit alpha JTY_3617 3967025 - 3967777 + | putative CoA-transferase subunit beta TERM 2136 3968355 - 3968399 + G 90 -17.8 -3.61398 | gap 1, overlap 3968390 TTGCCGTCGGTGCTG GACGCC-GTGGCGGGCACCGG CATC CCGGTGATCGCCGCCGGCGGC TTCTTCGACGGGCGC JTY_3618 3967875 - 3968942 + | putative oxidoreductase fdxB 3968939 - 3970996 + | putative electron transfer protein JTY_3620 3971953 - 3971084 - | hypothetical protein fadA6 3973218 - 3972058 - | acetyl-CoA acetyltransferase TERM 2137 3972960 - 3972982 + g 70 -13.4 -3.04144 | TGGATCCGCACTGGC GGTCCACGGT GAC ACCGGGGACC TCTTCGGGATAGCCG JTY_3622 3973885 - 3973283 - | putative transcriptional regulatory protein TERM 2138 3974412 - 3974458 + G 76 -6.5 -4.56597 | overlap 3974433 GGCAGGCGTGGCAGG GCCCGGCGT-CGGCGGCGATG GCCGCCG CGGCGGCGCCGTATGC-GGGC TTTTTGACCACAGCC PPE64 3974234 - 3975892 + | PPE family protein JTY_3624 3976689 - 3975901 - | short chain dehydlogenase fadE30 3977843 - 3976686 - | putative acyl-CoA dehydrogenase fadD3 3977891 - 3979414 + | acyl-CoA synthetase fadE31 3979415 - 3980548 + | putative acyl-CoA dehydrogenase TERM 2139 3980761 - 3980730 - g 75 -13.8 -3.32844 | gap 1, opp_overlap 3980727 3980732 GGGCGTAGCGGAGAA GTTCGA-CGGACTGG GTG CCAGTCCGGTCGATC TGGTTGTCGCGCTCG TERM 2140 3980732 - 3980759 + G 74 -15 -2.96452 | gap 1, opp_overlap 3980730, overlap 3980727 GCGTAGCGGAGAAGT TCGA-CGGACTGG GTG CCAGTCCGGTCGA TCTGGTTGTCGCGCT TERM 2141 3981350 - 3981331 - g 70 -10.6 -3.53811 | opp_overlap 3981331 GTCAGCGCCGCCAAA GCCGCCGC GAGC GAGGCGGC TCTGCTGGCGGCACG fadE32 3980545 - 3981504 + | putative acyl-CoA dehydrogenase fadE33 3981501 - 3982457 + | putative acyl-CoA dehydrogenase aspB 3982454 - 3983620 + | aspartate aminotransferase nat 3984436 - 3983585 - | arylamine N-acetyltransferase JTY_3632 3984687 - 3984421 - | hypothetical protein TERM 2142 3984959 - 3984918 - R 75 -14.5 -2.79183 | opp_overlap 3984918 3984934 3984935, overlap 3984925 3984935 GCGACGGCGAGCAGA CGCAAAATCGCCCAACACG CCCG CAAAATGGGCGATTTTGCG TCTGCTCGCGCCACT JTY_3633 3985536 - 3984973 - | putative oxidoreductase bphC 3986453 - 3985551 - | putative biphenyl-2,3-diol 1,2-dioxygenase TERM 2143 3985927 - 3985882 - G 76 -8.7 -4.19678 | opp_overlap 3985889 TTACAGCCGAAGAAA CGCAGCCAGGCTGGCGGCCCG TCGG CGGGCCGCCCTACCATCTGTG GCGGTAGCCGCATCG TERM 2144 3986335 - 3986354 + g 70 -10.6 -3.60098 | opp_overlap 3986336, overlap 3986336 TCCATCCGCAGATAC AGGGCCCC TTCT GGGGCCCC TTTGCCCTCGACCAT TERM 2145 3986353 - 3986336 - G 72 -14.1 -2.99471 | opp_overlap 3986336 3986335 CCATCCGCAGATACA GGGCCCC TTCT GGGGCCC CTTTGCCCTCGACCA bphD 3987325 - 3986450 - | 2-hydroxy-6-oxo-6-phenylhexa-2,4- dienoatehydrolase JTY_3636 3988524 - 3987340 - | putative oxidoreductase TERM 2146 3987822 - 3987833 + g 72 -5.8 -4.3739 | TAGTGGGATGCATTG TGCC CCAT GGCA TTTTATAGACAGGTG hmp 3988671 - 3989747 + | putative hemoglobine-related protein TERM 2147 3990008 - 3989953 - g 70 -9.8 -3.72576 | gap 3, opp_overlap 3989963 3989970 CGTCGCTGGAGCAAA TCTGCGCACACCCGACGGCCC-GACGG GCTTT CCGCCCGGGCTGT-GGGCGCGC-CAAA CCACCGAGATCCGTT JTY_3638 3989765 - 3990295 + | hypothetical protein fadE34 3992466 - 3990331 - | putative acyl-CoA dehydrogenase TERM 2148 3992991 - 3992973 - g 78 -10.2 -4.14739 | overlap 3992974 GCATCGACGCGAAAA CCGACCGC TCC GCGGTCGC CGGGGCCACCCCCTT TERM 2149 3992990 - 3992974 - g 73 -13.7 -3.08522 | overlap 3992973 CATCGACGCGAAAAC CGACCGC TCC GCGGTCG CCGGGGCCACCCCCT JTY_3640 3992738 - 3993337 + | transcriptional regulatory protein JTY_3641 3994422 - 3993343 - | transcriptional regulatory protein lppH 3994612 - 3995325 + | putative lipoprotein JTY_3643 3995516 - 3996382 + | hypothetical protein arsB2 3996396 - 3997637 + | putative arsenical pump integral membrane protein TERM 2150 3997657 - 3997698 + T 100 -27.7 -2.78463 | opp_overlap 3997657 3997664, overlap 3997664 AAGGGCGCGAGCAGA CGCAGAATCGCATGATTTG AGCT CAAATCATGCGATTCTGCG TCTGCTCGCGAGGCT TERM 2151 3997698 - 3997657 - T 100 -27.7 -2.78715 | opp_overlap 3997657 3997664, overlap 3997664 AAGGGCGCGAGCAGA CGCAGAATCGCATGATTTG AGCT CAAATCATGCGATTCTGCG TCTGCTCGCGAGGCT TERM 2152 3997664 - 3997691 + T 85 -15.8 -3.40299 | opp_overlap 3997657 3997664, overlap 3997657 CGAGCAGACGCAGAA TCGCATGATTTG AGCT CAAATCATGCGA TTCTGCGTCTGCTCG TERM 2153 3997691 - 3997664 - T 85 -15.8 -3.40299 | opp_overlap 3997664 3997657, overlap 3997657 CGAGCAGACGCAGAA TCGCATGATTTG AGCT CAAATCATGCGA TTCTGCGTCTGCTCG JTY_3645 3998647 - 3997679 - | putative tRNA/rRNA methyltransferase cysS 4000057 - 3998648 - | cysteinyl-tRNA synthetase ispF 4000601 - 4000122 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 4001293 - 4000598 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JTY_3649 4001798 - 4001310 - | putative transcription factor TERM 2154 4002422 - 4002434 + G 85 -7.7 -4.82901 | overlap 4002419 4002418 GACGCTCGACTGCCC GCATC CGG GATGC TTTTTGTCGGGACGC lpqE 4002083 - 4002631 + | putative lipoprotein radA 4002697 - 4004139 + | DNA repair protein JTY_3652 4004144 - 4005220 + | hypothetical protein JTY_3653 4006012 - 4005221 - | hypothetical protein canB 4006744 - 4006121 - | carbonic anhydrase mutY 4006743 - 4007657 + | putative adenine glycosylase PE_PGRS58 4009408 - 4007654 - | PE-PGRS family protein TERM 2155 4008042 - 4008066 + g 82 -17.1 -3.01712 | CCCGCACCCCCGACA CCGCCGACACC CCC GGTGCCGGCGG TGTTGGCGCCAGCCC TERM 2156 4008142 - 4008116 - G 83 -2.9 -5.14563 | overlap 4008117 TCCGCTACCAAAAAA GGTCAGC-GTGCC GGT GGCGCCGCCG-CC AATGCCACCATTGCC TERM 2157 4008515 - 4008543 + g 71 -12.4 -3.27704 | gap 1, overlap 4008508 4008538 CAGCCCTGCGCCACC GCTACCGGCGCCG TTGT TGGCGCCGG-GGC TTCCGTTTGCCGCCT JTY_3657 4010292 - 4009519 - | putative hydrolase TB11.2 4010307 - 4010624 + | hypothetical protein TERM 2158 4010643 - 4010625 - g 75 -13.1 -3.3676 | GGCAAGACTGCATAA CCGGCGC GCGGG GCGCCGG ATGCTGGCGTTAAGC lpqF 4010602 - 4011960 + | putative lipoprotein TERM 2159 4012914 - 4012868 - gT 75 -12.3 -3.62046 | gap 1, overlap 4012837 4012835 4012890 CGAGCTCGGCAATAA GGTCGACGCCCTGGC-CGCA AAACTCGA CGCGCGCGAGGGCCTCGACC GGCCCAGTGACACTC PE_PGRS59 4014326 - 4012848 - | PE-PGRS family protein JTY_3660 4012107 - 4012934 + | hypothetical protein TERM 2160 4013424 - 4013461 + gT 86 -15.5 -3.54424 | gap 1 AGCCGCCGGCCCCGC CGGTCCCCCCGGTGCCGC CGG GCG-CGCCGGGGCCACCG TTTCCGCCGGTCCCG clpC 4016980 - 4014434 - | putative ATP-dependent Clp protease ATP-binding subunit TERM 2161 4017249 - 4017214 - R 100 -24.8 -3.5774 | opp_overlap 4017217, overlap 4017215 4017217 AGCGAACGCGGCAAA GTACCGGCGCCCAGGC TTTC GCCTGGGCGCCGGTAG CCAAATGTCAGGTCG TERM 2162 4017248 - 4017215 - R 100 -28.3 -2.74322 | opp_overlap 4017217, overlap 4017214 4017217 GCGAACGCGGCAAAG TACCGGCGCCCAGGC TTTC GCCTGGGCGCCGGTA GCCAAATGTCAGGTC TERM 2163 4017246 - 4017217 - R 100 -26.5 -2.9162 | opp_overlap 4017217, overlap 4017215 4017214 GAACGCGGCAAAGTA CCGGCGCCCAGGC TTTC GCCTGGGCGCCGG TAGCCAAATGTCAGG lsr2 4017595 - 4017257 - | putative lsr2 protein precursor lysS 4019216 - 4017699 - | lysyl-tRNA synthetase TERM 2164 4018111 - 4018128 + g 73 -12.7 -3.42699 | TCCTCGATGAGTTTG CCGTGGC CGAA GCCACGG TTGTCATGAATCGCT TERM 2165 4018866 - 4018892 + g 73 -10.8 -3.6682 | opp_overlap 4018847 4018871 CGCGCCATGCACGTA GACGATGTCGCC CAG GTCGACATCGGC TTTCCATGCGTCGAG JTY_3665 4020135 - 4019317 - | pantothenate kinase panD 4020557 - 4020138 - | aspartate alpha-decarboxylase panC 4021486 - 4020557 - | pantoate--beta-alanine ligase JTY_3668 4022394 - 4021483 - | hypothetical alanine and leucine rich protein TERM 2166 4021524 - 4021546 + g 93 -16.3 -3.91144 | opp_overlap 4021508 CCGCGGGGGCGTGTG CGCGCTGCG CGGTC CGCAGCGCG TTTATCCGGTATGCC JTY_3669 4023772 - 4022579 - | putative transmembrane protein rich in alanine and arginine and proline TERM 2167 4022707 - 4022688 - G 75 -11.4 -3.64703 | TCCCGCGCATGCAAA CCACCGGA GTCA TCCGGCGG CGTGTCCGCGGTGCG TERM 2168 4022931 - 4022967 + g 100 -19.4 -3.66178 | gap 1, overlap 4022934 CTGGCATGCCGGGCG CGGCGCCGGC-GCCCCG GCGG CGGGGCCGCCGGCGTGG TTTCGGGTTCGACGG TERM 2169 4022934 - 4022964 + g 100 -21.9 -2.94412 | gap 1, overlap 4022931 GCATGCCGGGCGCGG CGCCGGC-GCCCCG GCGG CGGGGCCGCCGGCG TGGTTTCGGGTTCGA JTY_3670 4024457 - 4023981 - | putative secreted protein TERM 2170 4024438 - 4024394 - G 73 -14.2 -3.14051 | opp_overlap 4024393 4024394, overlap 4024392 4024396 4024398 GCACCGCCACCAACA GATATCCCACCGCCGCGGCG CCGAC CACCGCGGCGGTCAGATCAC GTTTTCGGGTCGGTC TERM 2171 4024436 - 4024396 - G 78 -15.4 -3.13073 | opp_overlap 4024394 4024393, overlap 4024394 4024392 4024398 ACCGCCACCAACAGA TATCCCACCGCCGCGGCG CCGAC CACCGCGGCGGTCAGATC ACGTTTTCGGGTCGG TERM 2172 4024434 - 4024398 - G 86 -18 -3.12449 | opp_overlap 4024394 4024393, overlap 4024396 4024394 4024392 CGCCACCAACAGATA TCCCACCGCCGCGGCG CCGAC CACCGCGGCGGTCAGA TCACGTTTTCGGGTC folK 4025023 - 4024457 - | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase folB 4025421 - 4025020 - | putative dihydroneopterin aldolase folP1 4026256 - 4025414 - | dihydropteroate synthase 1 folE 4026861 - 4026253 - | GTP cyclohydrolase I TERM 2173 4026388 - 4026420 + g 83 -3.3 -5.14563 | GCACAGATGCTCAGC CTCGATCACCACG ATTACCC CGCGTGGATCGAG TTTTTTCATCAGGGC ftsH 4029159 - 4026877 - | membrane-bound protease TERM 2174 4029254 - 4029240 - gR 77 -12.8 -3.59979 | overlap 4029210 4029211 CGTGGCGATCGCAAA CCCGGC GGA GCCGGG TGCAGCGGGTCGCCA JTY_3677 4030012 - 4029683 - | hypothetical protein JTY_3676 4029226 - 4029768 + | hypothetical arginine and proline rich protein JTY_3678 4030207 - 4030046 - | hypothetical protein JTY_3679 4030861 - 4030307 - | hypothetical protein JTY_3680 4031288 - 4030977 - | hypothetical protein JTY_3681 4032540 - 4031362 - | hypothetical alanine and glycine rich protein TERM 2175 4032152 - 4032133 - G 78 -10 -4.07568 | gap 1 CGCGCCCGCGCAAAA CGG-CGCCT GGA AGGCGGCCG ATAGGGCGTGCCCGA TERM 2176 4032405 - 4032417 + g 70 -2.6 -4.60487 | opp_overlap 4032395 4032394 GAAACGCTGCTGCCA GCTC CTCCA GGGC TTTTTCGAAGTACTC lpqG 4033006 - 4033521 + | putative lipoprotein hpt 4034176 - 4033526 - | hypoxanthine-guanine phosphoribosyltransferase mesJ 4035144 - 4034173 - | putative cell cycle protein JTY_3685 4036175 - 4035123 - | hypothetical protein TERM 2177 4035306 - 4035326 + g 88 -14.7 -3.96148 | opp_overlap 4035298 CAGCAGAGCTCGCAC CAGCCGCTG CAG CGGCGGCTG TTTGTGATGACGACG JTY_3686 4037557 - 4036172 - | hypothetical protein ppa 4037695 - 4038183 + | inorganic pyrophosphatase JTY_3688 4039326 - 4038229 - | putative integral membrane protein TERM 2178 4038347 - 4038309 - G 77 -3.7 -4.82901 | gap 1, overlap 4038310 CCGCCCCGATAAAAA CCACCCCCACCGAAGCGG TGAC CCACT-CGGGGACGGCGA ATCGGTGGTCGATGG JTY_3689 4039447 - 4040742 + | putative integral membrane protein JTY_3690 4040786 - 4041511 + | putative transferase JTY_3691 4041508 - 4041852 + | hypothetical protein JTY_3692 4042063 - 4042938 + | hypothetical protein galE1 4043883 - 4042939 - | UDP-glucose 4-epimerase TERM 2179 4043094 - 4043147 + g 84 -13.8 -3.91084 | opp_overlap 4043090 4043133 GGTGGAACTCAGGGT CGTCGGGCCCGCCGACAGC-CGCGGC CACC GCCGAATGCAGTTGGCG-GTCCGACG TTTCCTTACCGGTGC TERM 2180 4045035 - 4045072 + G 76 -6.1 -4.56597 | gap 1, opp_overlap 4045003, overlap 4045000 4045035 4045038 GGCTGGACGCCTCGC CGGCCCGAGCCGTTGCGA CAG TCGCTTCGGC-CGTGTTG TTTTTGACCAGCAGC TERM 2181 4045038 - 4045069 + G 73 -6.4 -4.40561 | gap 1, opp_overlap 4045003, overlap 4045000 4045035 4045035 TGGACGCCTCGCCGG CCCGAGCCGTTGCGA CAG TCGCTTCGGC-CGTG TTGTTTTTGACCAGC JTY_3694 4043906 - 4045681 + | putative transmembrane protein JTY_3695 4046024 - 4046371 + | putative transposase JTY_3696 4046756 - 4047256 + | putative transposase TERM 2182 4047847 - 4047837 - g 70 -8.2 -3.9392 | opp_overlap 4047840 CGTCACGTCAAATAA GCCC TTC GGGC GCTGGGGCGAAGTAT JTY_3697 4047256 - 4048002 + | transposase JTY_3698 4048722 - 4048156 - | hypothetical protein JTY_3699 4050021 - 4048792 - | putative transposase TERM 2183 4049167 - 4049110 - G 81 -15.2 -3.54424 | GCCGATCTTGGGAAA CGACGCGGCGAGGCGAT-CACG-GACCT CCTCCC AGGTCGCGTGCACCGCCTCG--GCGTCG GGTGCCGAGAAAATC fic 4050832 - 4050197 - | putative cell filamentation protein JTY_3701 4051037 - 4050843 - | hypothetical protein JTY_3702 4051432 - 4051623 + | hypothetical protein JTY_3703 4052993 - 4051788 - | DNA polymerase III subunit delta JTY_3704 4053079 - 4054728 + | putative transmembrane protein topA 4057529 - 4054725 - | DNA topoisomerase I TERM 2184 4055359 - 4055380 + g 84 -13.7 -3.91897 | opp_overlap 4055350 CCAAACCGGCCTTCC CTGGCCACG ATCT CGTGGCCGG TTTCTGGGTCCAAGC JTY_3706 4058460 - 4057882 - | hypothetical protein TERM 2185 4058480 - 4058451 - G 78 -10.1 -4.07618 | gap 1, opp_overlap 4058475, overlap 4058475 CGGCGAAGAAGGAAA GCTGGCTCACC-TC ACC GACAGTAAGCCAGC GAGCGGGTCGCTGGC TERM 2186 4058495 - 4058475 - R 74 -12.6 -3.2794 | opp_overlap 4058475, overlap 4058451 CCTCACCGACAGTAA GCCAGCGA GCGGG TCGCTGGC TTTAGGCATCCGGCG TERM 2187 4058475 - 4058495 + r 77 -12.6 -3.57144 | opp_overlap 4058451 4058475 CCTCACCGACAGTAA GCCAGCGA GCGGG TCGCTGGC TTTAGGCATCCGGCG TERM 2188 4058546 - 4058573 + r 100 -20 -4.7173 | opp_overlap 4058546 GCGAGCAGACGTAAA GCCCCCAAAACG GAAC CGTTTTGGGGGC TTTTTGCGTCTGCTC TERM 2189 4058573 - 4058546 - R 100 -20 -3.727 | opp_overlap 4058546 GCGAGCAGACGTAAA GCCCCCAAAACG GAAC CGTTTTGGGGGC TTTTTGCGTCTGCTC cspA 4058803 - 4058600 - | putative cold shock protein A TERM 2190 4059598 - 4059610 + G 73 -9.1 -3.99324 | CTGGGCTGTGCTGTT GCGGA ATC TCCGC TTTGTGATCGTCGAC JTY_3708 4059053 - 4061368 + | putative helicase PE33 4061505 - 4061789 + | PE family protein JTY_3710 4062113 - 4063150 + | hypothetical protein TERM 2191 4063171 - 4063204 + F 83 -14.6 -3.40899 | opp_overlap 4063175, overlap 4063159 4063175 AGTCCTTTCGACTCA GCAACGGCAGCTGC CGATCC GCGGCTACCGTTGC TTGTCGTGAACGGTT PE_PGRS60 4063904 - 4064218 + | PE-PGRS family protein TERM 2192 4064675 - 4064713 + G 86 -18.1 -3.01712 | gap 1 TCCGCGGTGCCGGCG GCACCGGCGGTGCCGGCG GGGA CGGCGGCAACGCCGG-GC TGTTCGGCGACGGCG PE_PGRS61 4064212 - 4064907 + | PE-PGRS family protein JTY_3713 4065278 - 4065024 - | hypothetical protein TERM 2193 4065383 - 4065347 - R 100 -29.5 -2.73364 | TCGCGACGGCAAGCA CGGTGGCCGAGCCGCGG TCA CCCCGGCTCGGCCACCG AAATTGCCCTAGCAG JTY_3714 4065663 - 4065364 - | hypothetical protein JTY_3715 4065893 - 4065687 - | hypothetical protein JTY_3716 4066478 - 4065903 - | putative alanine rich membrane protein TERM 2194 4066037 - 4065987 - G 73 -11.1 -3.6279 | overlap 4065992 4066018 AAACGCCGGTAAGAA GC-ACAGTCCCAGCGGGCCGGCG ATCAGCA CACCGGCCCGCTCGG-CGGCCGC CGCGGCCGCCTGTGC TERM 2195 4066031 - 4065992 - G 74 -15 -3.01745 | gap 1, overlap 4065987 4066018 CCGGTAAGAAGCACA GTCCCAGCGGGCCGGCG ATCAGCA CACCGGCCCGCTCGG-C GGCCGCCGCGGCCGC TERM 2196 4066291 - 4066250 - G 72 -14.3 -3.01712 | gap 1 CGGCCCGGCGCAACA CGCGCGCCAGCCGCGGCGGC GCG ACCGCAGCGG-TGGCGGCCG CGGCCGTCGACACCG JTY_3717 4067302 - 4066502 - | putative transmembrane protein JTY_3718 4068357 - 4067299 - | hypothetical protein JTY_3719 4069511 - 4068459 - | hypothetical protein TERM 2197 4070080 - 4070094 + G 79 -7 -4.59773 | overlap 4070082 GGCACCGCTCCGCGA GCCCGC ACC GCGGCC TTTTTCGACCTGGAC JTY_3720 4070011 - 4070874 + | hypothetical protein TERM 2198 4071305 - 4071341 + T 100 -20.9 -5.54907 | CCGAGAACCGTGTTG GTGGGCGGCGATTCGAG TTC TTCGGGTCGCCGCCCGC TTTTTGTTTTCTGGA JTY_3721 4072399 - 4071629 - | hypothetical protein TERM 2199 4072008 - 4071981 - G 73 -11.2 -3.67976 | GCGAGCAACTCCAAA CGCGGGCCAACG TCGG CATCGGACCGCG GACGCCCAAGCCGAT dppD 4074042 - 4072396 - | putative dipeptide-transport ATP-binding protein ABC transporter dppC 4074839 - 4074039 - | putative dipeptide-transport integral membrane protein ABC transporter dppB 4075821 - 4074895 - | putative dipeptide-transport integral membrane protein ABC transporter TERM 2200 4075202 - 4075149 - G 71 -12.3 -3.31322 | gap 1 GCGAATTGCGCAGAA TGTGCACCGTCACCACC-CGGGGCCG CGA CAACCCCTTGGCGGTGGCGGTGCGGA CATAGTCAGCGTGTG dppA 4077448 - 4075823 - | putative periplasmic dipeptide-binding lipoprotein TERM 2201 4080147 - 4080182 + r 74 -10.2 -3.68936 | opp_overlap 4080145 4080149, overlap 4080172 TCAGCCCAGCCAACT CAGGCCGGTACCGGGA CGAA TCCCGCGCCCGGCCGG TTCTTGGCGTTGATG JTY_3727 4080844 - 4080146 - | putative protease TERM 2202 4081414 - 4081438 + G 90 -2.7 -5.51353 | overlap 4081417 CTTCATCTCCTCGCT GGTGGTCGGGT TCT ACTCCACCTTC TTTTTCTTCTTTTTC TERM 2203 4081417 - 4081435 + G 81 -5.2 -4.74161 | overlap 4081414 CATCTCCTCGCTGGT GGTCGGGT TCT ACTCCACC TTCTTTTTCTTCTTT JTY_3728 4081190 - 4081708 + | putative transmembrane protein TERM 2204 4082004 - 4081994 - g 70 -8.2 -3.91897 | overlap 4081995 GGCGGCAGCGACAAA CCGC CCC GCGG GTACGACGGCTGGAC ephE 4081709 - 4082692 + | putative epoxide hydrolase JTY_3730 4083878 - 4082685 - | putative membrane-associated serine protease TERM 2205 4083055 - 4083008 - G 70 -11.9 -3.44794 | overlap 4082978 4082996 4083044 4083047 AACCCAGCACCACAA CGTCGGCACCGGTTTTCGCCG GCTCCG CAGCGAAGACCAGCGGCGGCG GCGGCAAGTGCGGAA JTY_3731 4084705 - 4083884 - | hypothetical protein TERM 2206 4084462 - 4084428 - G 77 -16.4 -2.62184 | overlap 4084460 TCGTCTGGGACACCA CCGTCGCCTGGCCCGG CCT CCGGGCCAGAAAACAG CACCAGAACGGCCGC JTY_3732 4085520 - 4084837 - | putative membrane-anchored thioredoxin-like protein TERM 2207 4085270 - 4085293 + g 70 -11 -3.55444 | GCGCCCGGACCGTTA CCTGCCGC GGGACAGG GCGGCAGG TTTGCGCGCTGCCGG nth 4086257 - 4085520 - | putative endonuclease III JTY_3734 4086365 - 4086742 + | hypothetical protein JTY_3735 4086841 - 4087515 + | putative transcriptional regulatory protein JTY_3736 4088415 - 4087621 - | putative hydrolase JTY_3737 4088877 - 4088422 - | hypothetical protein JTY_3738 4089054 - 4088893 - | hypothetical protein JTY_3739 4089139 - 4090161 + | putative anion transporter ATPase JTY_3740 4090158 - 4091318 + | putative anion transporter ATPase whiB4 4091917 - 4091561 - | putative transcriptional regulatory protein whiB-like ponA2 4092279 - 4094711 + | putative bifunctional membrane-associated penicillin-binding protein 1A/1B TERM 2208 4095478 - 4095499 + G 75 -13.7 -3.28924 | GGCCGGCCACACCCA CGGCGGGCA GCTG TGCCTGCCG TTGTACGGGGCGCTG JTY_3743 4094780 - 4095739 + | hypothetical protein TERM 2209 4096494 - 4096527 + G 71 -9.5 -3.87373 | gap 1, overlap 4096503 CACATCGTCCCGTAT CGAGGGCATCGGCCGG CCG CGGGTCGA-GCCGTCG TTTCTGCCCGGTGTG JTY_3744 4095802 - 4096842 + | putative lyase cyp137 4099088 - 4097658 - | putative cytochrome P450 137 JTY_3746 4099446 - 4099114 - | hypothetical protein JTY_3747 4099931 - 4099686 - | hypothetical protein JTY_3748 4100720 - 4100256 - | hypothetical protein TERM 2210 4100477 - 4100502 + gH 76 -8.1 -4.24204 | GTGCCTCGGCATGCT CGGTGGCGGCG AGCT CACCGCGGCCG TTTTGGGTGTAGATC TERM 2211 4102021 - 4102007 - gH 74 -12.8 -3.29829 | CAGACCGGCTTAGAA GCCGGC CCC GCCGGC GGGCCCGCCCCGGTG JTY_3749 4100720 - 4102075 + | putative transmembrane protein JTY_3750 4102102 - 4102755 + | hypothetical protein JTY_3751 4102881 - 4103882 + | hypothetical protein TERM 2212 4104051 - 4104017 - g 74 -12.2 -3.50853 | CGGGCTGAAGCAGAA TCGGCACGTGATGC ATTGCTG GCATTACGCGCCGA GGTCGCCAAGGCCGT moxR2 4103879 - 4104955 + | putative methanol dehydrogenase transcriptional regulatory protein TERM 2213 4105071 - 4105019 - f 93 -19.2 -3.14132 | gap 1, overlap 4105047 CTTGCGGGGGACGAA GCGATGGGGTGGGGGTACGCCCCCA CAAG TGGGAG-GTACCCCCACCCGCTTGC GGGGGAGAGCGGCGC JTY_3753 4105089 - 4106411 + | hypothetical protein JTY_3754 4107477 - 4106485 - | putative transmembrane protein TERM 2214 4106636 - 4106620 - G 74 -7.9 -4.1822 | GGCGATCCGAACAAA CGTCGGC AAC GGCGACG GTGTCACCACCGCCT JTY_3755 4107569 - 4108501 + | hypothetical protein glpK 4110121 - 4108565 - | glycerol kinase TERM 2215 4108933 - 4108949 + g 70 -11.5 -3.36273 | TCGCCTCCAGCGTTG CGCGCGC CAG GTGCGCG TTGGTGTTGAACCGC TERM 2216 4109051 - 4109027 - G 75 -9.2 -4.11371 | opp_overlap 4109027, overlap 4109017 4109042 4109045 GAACAGCCCGGAAAA CGCCGGCACG AAATA CATGCCGCCG TTGTCGGGGACCTGG JTY_3757 4110608 - 4110171 - | hypothetical protein JTY_3758 4110829 - 4110605 - | hypothetical protein JTY_3759 4110859 - 4112388 + | hypothetical protein JTY_3760 4112410 - 4113111 + | hypothetical protein JTY_3761 4114286 - 4113114 - | hypothetical protein JTY_3762 4115282 - 4114317 - | hypothetical protein JTY_3763 4115980 - 4115279 - | hypothetical protein JTY_3764 4117257 - 4115980 - | hypothetical protein gshA 4118552 - 4117254 - | glutamate--cysteine ligase GshA JTY_3766 4119328 - 4118684 - | hypothetical protein TERM 2217 4119441 - 4119409 - R 86 -13.6 -3.86252 | overlap 4119437 4119438 GCCGACCAAACAGAA GGCCCTTTTCTTGA ACGAG TCAAGAAAAGGGGC TGGTGCGCCCGGCCG TERM 2218 4119475 - 4119437 - R 75 -4.3 -4.69656 | overlap 4119409 4119438 AACGAGTCAAGAAAA GGGGCTGGTGCGCCC GGCCGCTAG GGGCGCGCCGGCGCG GTGGTGGGACCCGGA JTY_3767 4119846 - 4119457 - | hypothetical proline rich protein TERM 2219 4119743 - 4119766 + g 75 -7.3 -4.30576 | ATCACCACCCACGCT GCGGCCCGG TAGAGC CTGGGCGGC TTTTCCTGCTGCGGC TERM 2220 4119914 - 4119946 + r 87 -17.1 -2.86539 | gap 1, overlap 4119911 GTGCCATGAACTGGT GCAGCCCGGTG-CC TTGGGT GGACACCGGGCTGC TGGTTGTCGGTTACG JTY_3768 4120277 - 4119957 - | hypothetical proline rich protein JTY_3769 4121406 - 4120396 - | hypothetical protein asd 4122583 - 4121546 - | aspartate-semialdehyde dehydrogenase ask 4123849 - 4122584 - | aspartokinase TERM 2221 4123486 - 4123459 - G 74 -7.6 -4.25283 | opp_overlap 4123463, overlap 4123462 ATCCGGCCACCAAAA CGACCCGCCCCT CCTC AAGGGCGGTTTG CAGCCGCCCCGGCGT leuA 4124106 - 4126553 + | 2-isopropylmalate synthase dnaQ 4127608 - 4126619 - | DNA polymerase III subunit epsilon TERM 2222 4127702 - 4127673 - H 78 -9.9 -4.07568 | gap 1, overlap 4127674 TGTCGGCCCGTAAAA CCCGGACGCGGGCG ACC CGC-CGCACCCGGC GACAAGCGCCGAGCT TERM 2223 4127701 - 4127674 - H 75 -13.4 -3.04398 | gap 1, overlap 4127673 GTCGGCCCGTAAAAC CCGGACGCGGGCG ACC CGC-CGCACCCGG CGACAAGCGCCGAGC TERM 2224 4127760 - 4127734 - H 100 -18 -3.53811 | overlap 4127735 4127752 GCGATCGCCCGTAAA CTGCCCGGGTGG TAA CCACCCGGGCAC GCCTGGCCCTAGCCG TERM 2225 4127759 - 4127735 - H 100 -21.5 -2.72144 | overlap 4127734 4127752 CGATCGCCCGTAAAC TGCCCGGGTGG TAA CCACCCGGGCA CGCCTGGCCCTAGCC TERM 2226 4128676 - 4128659 - g 72 -4.7 -4.56597 | overlap 4128636 4128660 CCTGCTGGCCAAAAA CCCGGCC GGCT GGCAGGA AGCGCTGGCGATGGT JTY_3774 4127742 - 4128983 + | putative ligase cobQ2 4128988 - 4129683 + | putative cobyric acid synthase JTY_3776 4130582 - 4129692 - | hypothetical protein recR 4131261 - 4130650 - | recombination protein JTY_3778 4131674 - 4131273 - | hypothetical protein JTY_3779 4131809 - 4132534 + | hypothetical protein JTY_3780 4133019 - 4132576 - | hypothetical protein TERM 2227 4133969 - 4133951 - g 82 -11.6 -4.07568 | opp_overlap 4133953 4133955, overlap 4133952 GTTTGGTGCCCAAAA CCCGCGGC TGC GCCGCTGG TGGCCGCGGCGCTAC JTY_3781 4133067 - 4134479 + | hypothetical protein TERM 2228 4135243 - 4135274 + G 74 -7.8 -4.20516 | GCGGCATTCCGACTA CCGCGACGTAGCCG AGAC CGGTTTCGACGCCG TTTCTTCGATCGGGC JTY_3782 4134497 - 4135759 + | putative fatty acid synthase dnaZX 4137492 - 4135756 - | DNA polymerase III subunit gamma and tau JTY_3784 4138889 - 4137582 - | hypothetical protein JTY_3785 4139297 - 4140061 + | putative transmembrane protein cut5 4140228 - 4140929 + | putative cutinase precursor JTY_3787 4140974 - 4141975 + | putative oxidoreductase JTY_3788 4142182 - 4143375 + | putative dehydrogenase TERM 2229 4144892 - 4144876 - g 70 -3.6 -4.56775 | overlap 4144878 AGGTTTCTGGAAAAA CGTCCG CCTGC CGGAAG GAACCCGCTACGTTC JTY_3789 4143716 - 4145524 + | putative oxidoreductase TERM 2230 4146284 - 4146339 + G 74 -15.4 -2.64803 | gap 1, opp_overlap 4146290, overlap 4146323 TCGGCGGGCACTGGT GGAGAACCGGGCCGCCGGACGTCGG CGTGTGC CCGACGTGCG-CGGCGCGGTGCTGC TGGCTTTCGCGCTGG TERM 2231 4146333 - 4146290 - g 80 -16 -3.29511 | gap 1, opp_overlap 4146284 4146323 GGCACTGGTGGAGAA CCGGGCCGCCGGACGTCGG CGTGTGC CCGACGTGCG-CGGCGCGG TGCTGCTGGCTTTCG TERM 2232 4148424 - 4148443 + G 77 -5.6 -4.60797 | gap 1, overlap 4148423 CTCGCCGACGTCGTC GGCTGCTCG ATG CG-GCTGCC TTTTCTGTATGCGCC JTY_3790 4145634 - 4148831 + | putative two-domain membrane protein JTY_3791 4149046 - 4151376 + | putative transferase JTY_3792 4152481 - 4151441 - | hypothetical protein TERM 2233 4152247 - 4152257 + g 76 -8.2 -4.29738 | overlap 4152240 AGTCAGGGCGGTGCC GCGG GAT CCGC TTTTGGTAGATCTGC ligC 4152519 - 4153595 + | ATP-dependent DNA ligase JTY_3794 4153695 - 4154753 + | hypothetical protein JTY_3795 4155273 - 4154773 - | hypothetical protein TERM 2234 4155200 - 4155190 - G 72 -8.2 -4.07568 | overlap 4155191 CTTTCCCGCCCAAAA CGGG CCG CCCG GATGCGCCAGAAGGA JTY_3796 4156651 - 4155287 - | hypothetical protein TERM 2235 4156634 - 4156622 - G 75 -3.3 -4.78077 | TTCAATGAAAAGAAA CATCG AGT CGTTG GGCATCATCAGATCC JTY_3797 4156850 - 4157338 + | hypothetical protein JTY_3798 4157395 - 4158456 + | transcriptional regulatory protein JTY_3799 4158460 - 4160049 + | putative transmembrane protein JTY_3801 4161774 - 4160428 - | hypothetical protein JTY_3802 4162448 - 4161774 - | putative oxidoreductase JTY_3803 4162840 - 4162445 - | putative oxidoreductase TERM 2236 4162613 - 4162634 + g 75 -12.9 -3.44051 | TCGGTGGACCATGAT GGCGTCCGC GCTG GCGGTCGCC TTCTCGTGCTGCCAC ctpJ 4164968 - 4162986 - | putative cation transporter P-type ATPase TERM 2237 4164666 - 4164638 - G 70 -10.9 -3.52073 | overlap 4164639 4164641 4164646 TTGCGAAGATGACAA TGAGCAGAGCGCC CTC GGCGATCTGCCCG ATGGCGGCCGCGCCG JTY_3805 4165035 - 4165397 + | transcriptional regulatory protein JTY_3806 4165693 - 4165481 - | hypothetical protein PE34 4166101 - 4165766 - | putative PE family protein JTY_3808 4166319 - 4166702 + | hypothetical protein JTY_3809 4166832 - 4167191 + | hypothetical protein JTY_3810 4167733 - 4167224 - | hypothetical protein JTY_3811 4168193 - 4167801 - | putative excisionase JTY_3812 4168469 - 4168684 + | putative integrase JTY_3813 4169300 - 4168842 - | putative cytidine/deoxycytidylate deaminase JTY_3814 4169837 - 4169316 - | hypothetical protein TERM 2238 4170060 - 4170099 + G 80 -14.2 -3.74693 | gap 1, opp_overlap 4170060 AGTCTTTGGCTACAA CCGGTCGGTGGAGGGTGCC CAC GGCGCCCGCT-CCGACGGG TTTGATGCCATAACC tyrA 4170016 - 4170921 + | prephenate dehydrogenase JTY_3816 4171483 - 4170884 - | hypothetical protein proZ 4172208 - 4171489 - | putative osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter proW 4172894 - 4172205 - | putative osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter proV 4174012 - 4172882 - | putative osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport ATP-binding protein ABC transporter proX 4174968 - 4174021 - | putative osmoprotectant (glycine betaine/carnitine/choline/L-proline) binding lipoprotein TERM 2239 4175088 - 4175075 - H 74 -2.4 -4.95155 | GGGATAGGACAAAAA TGGT GTCATG ACCA GCAATCCCTCTTCCT JTY_3821 4175133 - 4175435 + | hypothetical protein fadE36 4176512 - 4175457 - | putative acyl-CoA dehydrogenase JTY_3823 4178471 - 4176591 - | putative hydrolase TERM 2240 4176970 - 4176939 - G 70 -3.5 -4.57073 | gap 1 CAGCTGGGCGAAAAA CGTG-GGCGCCGGG ACTTG CCCGGAGCTGCCCG GGTTCCCGTCGCGCA TERM 2241 4177592 - 4177632 + g 75 -9.6 -4.09685 | opp_overlap 4177560 4177590 GATCGCGCACCAAGG CGCCGCGCAGGGTCAGCA GGTTG TGCAGGTTATGCGTGGCG TTTTCGGCCATGCAC TERM 2242 4177884 - 4177908 + g 85 -9.9 -4.25104 | GTAGCCCGCACGGCG CATCATCGCCG AGC CGGCGTAGATG TTTTCCTGCACGGCG TERM 2243 4178112 - 4178082 - G 75 -13.2 -3.48276 | GTGGGCGCGATACAA GTCCAGCGCGGCGG CGG CCACCTCGGTGGAC ACCAACGGGTCGATG lpqH 4178642 - 4179121 + | 19 kDa lipoprotein antigen precursor JTY_3825 4180604 - 4179177 - | putative two component sensor kinase JTY_3826 4181379 - 4180675 - | putative two component transcriptional regulatory protein TERM 2244 4180734 - 4180747 + g 70 -2.3 -4.57569 | overlap 4180727 4180733 4180732 GAATCATGGGTTCGC GACCG TTGT CGATC TTTTTGCGCAGGTAC JTY_3827 4181888 - 4182577 + | hypothetical protein JTY_3828 4183535 - 4182591 - | hypothetical protein TERM 2245 4183279 - 4183269 - G 70 -2.4 -4.57837 | ATACTCGTCGAAAAA CGCG GTC CGGG CGGCCATGAAATCGA JTY_3829 4183665 - 4184024 + | hypothetical protein JTY_3830 4184210 - 4184482 + | hypothetical protein JTY_3831 4185370 - 4184795 - | hypothetical leucine rich protein JTY_3832 4185658 - 4185476 - | putative remnant of a transposase JTY_3833 4185864 - 4185673 - | putative remnant of a transposase JTY_3834 4186325 - 4185999 - | hypothetical protein TERM 2246 4186285 - 4186267 - G 70 -10.2 -3.64703 | overlap 4186237 GCCGGGCGAGCCAAA TCCGCGGC GAT GCGGCGGA ACCCGACCTGGCTCA hisC2 4186729 - 4187790 + | putative aminotransferase JTY_3836 4188180 - 4187836 - | hypothetical protein JTY_3837 4188421 - 4188185 - | hypothetical protein TERM 2247 4189006 - 4188984 - g 93 -9.8 -4.59773 | overlap 4188986 GCTGACCGGCAAAAA TATCGACGCG GCC CGCGCCGAGA AGATCGGCCTGGTCA TERM 2248 4189004 - 4188986 - g 82 -12.4 -3.91506 | overlap 4188984 TGACCGGCAAAAATA TCGACGCG GCC CGCGCCGA GAAGATCGGCCTGGT TERM 2249 4189166 - 4189138 - g 73 -10.9 -3.71848 | opp_overlap 4189137 GTTCTCGACCAACAA CGCACGTCCGCCG TCT CGGAGAACCTGCG CTATGTCGCCGCCTG echA21 4188445 - 4189269 + | enoyl-CoA hydratase TERM 2250 4189642 - 4189606 - g 73 -15.1 -2.87564 | CGACCGTTGTACACA TGCTCGTCGAGCGCGGA CAC TTCGCGCTCGACGACCG CGTCTGCGAGTACCT lipE 4189281 - 4190528 + | putative lipase TERM 2251 4190858 - 4190821 - f 76 -15.5 -2.52896 | overlap 4190843 CGATCGCCGAACTCA CCAGCCGGCGCACCGGC AATG ACCAGCGGGCCGACTGG GCGTGCGACGGCTGG JTY_3841 4192290 - 4193276 + | putative oxidoreductase JTY_3842 4194491 - 4193295 - | putative aminotransferase JTY_3843 4194581 - 4196581 + | putative transmembrane protein alanine and leucine rich JTY_3844 4196585 - 4197121 + | hypothetical protein rbfE 4197125 - 4197946 + | putative O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter JTY_3846 4197943 - 4198857 + | putative L-rhamnosyltransferase rfbD 4198854 - 4199696 + | putative O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter rfbB 4199852 - 4200832 + | putative dTDP-glucose 4,6-dehydratase JTY_3849 4200916 - 4201989 + | hypothetical protein JTY_3850 4203193 - 4201970 - | hypothetical protein JTY_3851 4204132 - 4203206 - | hypothetical protein TERM 2252 4203624 - 4203576 - G 91 -12.4 -4.18488 | gap 2, overlap 4203577 AGGTATCCGAACAAA CCCTCGGCGA-TCC-ACGCGGCCG GCT CGGCCGCATCGAAGCCGCCGCGGC GCAGCGCATCGGGCC TERM 2253 4203623 - 4203577 - G 78 -15.9 -3.10611 | gap 2, overlap 4203576 GGTATCCGAACAAAC CCTCGGCGA-TCC-ACGCGGCCG GCT CGGCCGCATCGAAGCCGCCGCGG CGCAGCGCATCGGGC JTY_3852 4204376 - 4204861 + | nucleotide diphosphate kinase regulator JTY_3853 4204970 - 4205335 + | hypothetical protein JTY_3854 4205375 - 4206760 + | putative oxidoreductase JTY_3855 4206761 - 4207525 + | short chain dehydrogenase TERM 2254 4207581 - 4207540 - g 100 -22.5 -2.79302 | opp_overlap 4207540 4207547, overlap 4207547 AGTATGCCGAGCAGA CGCAAAAGCCCCCAATTCG GGCA CGAAATGGGGGCTTTTACG TCTGCTCGCGCCCGG TERM 2255 4207540 - 4207581 + G 95 -20.3 -2.78384 | opp_overlap 4207540 4207547, overlap 4207547 AGTATGCCGAGCAGA CGCAAAAGCCCCCAATTCG GGCA CGAAATGGGGGCTTTTACG TCTGCTCGCGCCCGG TERM 2256 4207574 - 4207547 - g 95 -15.6 -4.24948 | opp_overlap 4207540 4207547, overlap 4207540 CGAGCAGACGCAAAA GCCCCCAATTCG GGCA CGAAATGGGGGC TTTTACGTCTGCTCG TERM 2257 4207547 - 4207574 + G 95 -15.6 -4.24948 | opp_overlap 4207547 4207540, overlap 4207540 CGAGCAGACGCAAAA GCCCCCAATTCG GGCA CGAAATGGGGGC TTTTACGTCTGCTCG TERM 2258 4207807 - 4207828 + G 75 -7.2 -4.3467 | overlap 4207810 GGTCGATTCCGGCGA CTGGCCCG GCTGGG CGGGCTGG TTTTGGTATCCGCGT JTY_3856 4207528 - 4209459 + | putative transmembrane protein embC 4209459 - 4212743 + | integral membrane indolylacetylinositol arabinosyltransferase embA 4212829 - 4216113 + | integral membrane indolylacetylinositol arabinosyltransferase TERM 2259 4216172 - 4216131 - g 72 -14.5 -2.78596 | opp_overlap 4216131 4216138, overlap 4216138 CAGTGCGCGAGCAGA CGCAAAAGCACCCCAAGTC GGGC GATTTTGGGGGCTTTTGCG TCTGCTCGCGGGACG TERM 2260 4216131 - 4216172 + G 77 -16.7 -2.78384 | opp_overlap 4216131 4216138, overlap 4216138 CAGTGCGCGAGCAGA CGCAAAAGCACCCCAAGTC GGGC GATTTTGGGGGCTTTTGCG TCTGCTCGCGGGACG TERM 2261 4216138 - 4216165 + G 70 -6.2 -4.24948 | opp_overlap 4216131 4216138, overlap 4216131 CGAGCAGACGCAAAA GCACCCCAAGTC GGGC GATTTTGGGGGC TTTTGCGTCTGCTCG TERM 2262 4217725 - 4217735 + G 74 -2.4 -4.72272 | overlap 4217711 ACGGTTCGCTGTCGC GGCG CTT CGGC TTTTTGATCACCGCG TERM 2263 4217906 - 4217945 + G 73 -13.4 -3.26471 | CCACTTCGGGCTGTT CGCCGCCGTAGGGGCGGC GATG GCCGCGCTGACGACGGTG TTGGTATCCCCATCG embB 4216110 - 4219406 + | integral membrane indolylacetylinositol arabinosyltransferase JTY_3860 4219474 - 4220601 + | hypothetical protein TERM 2264 4220672 - 4220660 - f 78 -6.3 -4.6645 | TAGACATATATAAAA CCTAT GCA ATAGG GTCGCGGCATGCCCG fadE35 4220681 - 4222462 + | putative acyl-CoA dehydrogenase JTY_3862 4222589 - 4223923 + | putative transposase accD4 4225544 - 4223976 - | putative propionyl-CoA carboxylase beta chain 4 TERM 2265 4224469 - 4224438 - G 72 -4.4 -4.57073 | gap 1, opp_overlap 4224427, overlap 4224439 CACCCCGGGCAAAAA CCCCGGT-GTGTCCA CGA CGAACACCAGCGGGA TGTCGAACGCGTCGC pks13 4230742 - 4225541 - | polyketide synthase TERM 2266 4226768 - 4226781 + g 72 -4.5 -4.49311 | GGCCCGCGCGATCTC CTCAG CGGT CTGGG TTTTCTGGTGCTCGT TERM 2267 4227339 - 4227372 + g 85 -18.1 -2.53263 | GTCACCAGCCGGGCG CCGTCGCCGGGCACC GCGC GCTGCTCGGCGGCGG TCAGTTGCGCGTCCG TERM 2268 4228780 - 4228793 + g 70 -5.9 -4.1899 | ATTCCAGCGAGGAGG CCTGG CCTT CCGGG TTTTGCATCCAGTCC TERM 2269 4230603 - 4230632 + g 70 -10.8 -3.53761 | gap 1 CCCAGCTCCACCATG GGCACC-GATTCG TCGAT CGAGTCCGGTGCC TTTCCGACGGCCTTA fadD32 4232662 - 4230749 - | acyl-CoA synthetase TERM 2270 4232072 - 4232108 + g 75 -15.9 -2.73364 | overlap 4232065 4232077 GCTCGGTATGCGGGT GGAACCCGACGTGTACT GCA AGTACGCGACGGTTTCC TCGTTGGCCTCGGGC TERM 2271 4232077 - 4232103 + g 83 -13 -3.84514 | overlap 4232065 4232072 GTATGCGGGTGGAAC CCGACGTGTACT GCA AGTACGCGACGG TTTCCTCGTTGGCCT JTY_3866 4233961 - 4232951 - | hypothetical protein TERM 2272 4233224 - 4233207 - G 76 -8.3 -4.26903 | overlap 4233208 TCGAGCGCACCAAAA CCGCCCG GCCG CGGGCCG GTCATAGTCAAACCA fbpD 4235058 - 4234159 - | secreted MPT51/MPB51 antigen protein TERM 2273 4234198 - 4234225 + g 71 -12.6 -3.30243 | opp_overlap 4234193 GCCCGACATAGCGCC CAGCTGGGGCGC CCAC GAGCCCCAGCCG TTGTCACCGCTGGCT TERM 2274 4234353 - 4234390 + g 70 -6.1 -4.17048 | gap 1, overlap 4234355 4234372 CGGCGGGATCGCTGG CTCCCGGGT-TGGTCGGG CTC CACACCCACACCCGGGTG TTGTTTTGCGCCAGC TERM 2275 4234562 - 4234549 - G 82 -5.9 -4.84359 | overlap 4234551 CGACGGGTACAAAAA GCCCG ACAT CGAGC CAGCGAAGCCGAAGC TERM 2276 4235221 - 4235181 - R 100 -27.8 -3.76402 | opp_overlap 4235181 ACGGGATTTAGGAAA CATCTAGCGGCGGCGACC ACAAG GGTCACCGCCGCTAGATG TTGTGTCTGTTCGGA TERM 2277 4235181 - 4235221 + r 100 -25.6 -3.68962 | opp_overlap 4235181 ACGGGATTTAGGAAA CATCTAGCGGCGGCGACC ACAAG GGTCACCGCCGCTAGATG TTGTGTCTGTTCGGA fbpA 4236254 - 4235238 - | secreted antigen 85-A JTY_3869 4238432 - 4236549 - | putative transmembrane protein JTY_3870 4239429 - 4238521 - | phosphoribose diphosphate TERM 2278 4238919 - 4238905 - G 77 -3.5 -4.78107 | CATGATCAGCAAAAA CCACT TGGAC AGCGG GATTTTGGTGGCCAC JTY_3871 4239933 - 4239436 - | putative transmembrane protein JTY_3872 4241875 - 4239962 - | galactofuranosyl transferase glf 4243071 - 4241872 - | UDP-galactopyranose mutase pirG 4243335 - 4244189 + | exported repetitive protein precursor TERM 2279 4244694 - 4244661 - g 73 -13.1 -3.31415 | gap 1, overlap 4244656 GAGTATGAAACCGAA CCACGCGATCCGGCGG GCA CCGACGGGTC-CGTGG AACTTGGAGGACTCA JTY_3875 4244394 - 4246013 + | hypothetical protein PE_PGRS62 4246167 - 4247681 + | PE-PGRS family protein JTY_3877 4248811 - 4247990 - | hypothetical protein JTY_3878 4249608 - 4248826 - | putative acyltransferase JTY_3879 4250381 - 4249626 - | putative acyltransferase JTY_3880 4251164 - 4250385 - | putative acyltransferase JTY_3881 4251240 - 4251995 + | putative phosphotransferase JTY_3882 4252042 - 4253592 + | hypothetical protein JTY_3883 4253589 - 4253924 + | hypothetical protein papA2 4255418 - 4254012 - | putative polyketide synthase associated protein TERM 2280 4254289 - 4254307 + g 72 -11.6 -3.54424 | opp_overlap 4254281 ACGAAATTGCCCGGC CGGGGCGG CCT CAGCCCCG TTTCGGGGCGTGCCA JTY_3885 4255566 - 4256279 + | putative integral membrane protein JTY_3886 4256314 - 4256682 + | hypothetical protein TERM 2281 4257474 - 4257440 - g 72 -7.1 -4.2704 | gap 2, opp_overlap 4257470 GGCAGCAGCAACAAA TGCGCTCCGCGGGGCCA ACG TGGGCCCG-GGCGC-CA ACAAGGCGTTGTCGA JTY_3887 4256679 - 4257527 + | hypothetical protein TERM 2282 4257722 - 4257754 + T 73 -8.4 -4.08216 | opp_overlap 4257721 4257741, overlap 4257726 CGAGCGTGAACTGAG GGCGGACCTCGG GCAGACACG CCGAGGTCTTCC TTTTGGGCAGCGTGG mmpL8 4261121 - 4257852 - | putative integral membrane transport protein TERM 2283 4258717 - 4258727 + g 83 -2.4 -5.17576 | opp_overlap 4258717 TCGGGTGAAATGAAG GCCG CCG CGAC TTTTTTGAGTTGGTC TERM 2284 4259908 - 4259891 - G 71 -9.1 -3.79113 | AGCCGGCCAGAATAA CCAGCAC CAGC GCGCTGG CGAGCAGATGAGTCT TERM 2285 4259985 - 4259964 - G 72 -8.6 -4.09739 | CGAACTCCGCCAAAA GCGCCGGG TGAGGT CACGGCGC GGCGCGATCCAACCG papA1 4262766 - 4261231 - | putative polyketide synthase associated protein pks2 4269197 - 4262817 - | polyketide synthase TERM 2286 4263178 - 4263156 - G 77 -5.4 -4.62302 | overlap 4263157 GAACACTTCGAAAAA CCGGCTGCGC TCT GCGAAGGCGA CCAGCCACGGGGCTC TERM 2287 4270750 - 4270765 + G 75 -3.2 -4.77036 | overlap 4270752 TGGCGACTCGGGCTT CGTGTC TGAG GACAAG TTTTTCATCATCGGC fadD23 4269404 - 4271158 + | acyl-CoA synthetase TERM 2288 4271176 - 4271188 + T 70 -10.5 -3.61517 | GTCACGCGACTTGCA CCCCG TCT CGGGG TTGTTCGGCAGCCAT JTY_3892 4272381 - 4271155 - | putative transposase JTY_3893 4272989 - 4272378 - | putative resolvase JTY_3894 4274600 - 4272990 - | putative dehydrogenase JTY_3895 4275277 - 4274648 - | transcriptional regulatory protein JTY_3896 4275349 - 4275831 + | hypothetical protein JTY_3897 4276403 - 4275828 - | hypothetical protein TERM 2289 4276005 - 4275978 - G 100 -22.8 -3.62096 | GTGTATTAGGCGAAA CGGCAGCGACGG CACA CCGTCGCTGCCG GCAAAGACGCCACCT JTY_3898 4276459 - 4277250 + | transcriptional regulatory protein serS 4278506 - 4277247 - | seryl-tRNA synthetase JTY_3900 4278639 - 4279988 + | hypothetical protein JTY_3901 4279993 - 4280343 + | hypothetical protein JTY_3902 4281300 - 4280602 - | putative phosphoglycerate mutase pheA 4282262 - 4281297 - | prephenate dehydratase JTY_3904 4282358 - 4283134 + | hypothetical protein JTY_3905 4283160 - 4283573 + | putative transcriptional regulatory protein bfrB 4283771 - 4284316 + | putative bacterioferritin glpQ1 4285155 - 4284331 - | putative glycerophosphoryl diester phosphodiesterase TERM 2290 4284692 - 4284736 + g 76 -8.3 -4.17048 | opp_overlap 4284669 CGGGATCGATCTGCG GAGGCGGGTGCGGCAATACCG AAC CGGTGTAGCAGCGCCAGCAGC TTGTTTTCCACCAGC JTY_3908 4286189 - 4285161 - | putative transmembrane protein TERM 2291 4287418 - 4287457 + H 85 -14.9 -3.54424 | opp_overlap 4287403 4287420 TCCCGGCATCGACGA GACGCCCCGGGCTGTCT TGGATC GGCCGGCCCGAGGCGTC TTTGCGCCCGTCAAG JTY_3909 4288367 - 4288858 + | putative transposase JTY_3910 4288873 - 4289232 + | hypothetical protein sodA 4290296 - 4290919 + | Fe-superoxide dismutase JTY_3912 4291130 - 4291663 + | hypothetical protein TERM 2292 4292074 - 4292088 + G 79 -7.1 -4.62069 | GTGCACGGGGTAGCG GTGGC GATCG GCCAC TTTTTGGGCTCGACC JTY_3913 4291918 - 4292826 + | putative transmembrane protein JTY_3914 4293091 - 4293489 + | hypothetical protein TERM 2293 4293653 - 4293632 - g 70 -11.5 -3.46068 | overlap 4293630 4293633 TCGGCAAGCGAAAGA GCCGCGCGA CCCG TCGCGCGGA AGCCCGCGCGATCAA TERM 2294 4293652 - 4293633 - g 72 -15 -2.6732 | overlap 4293632 4293630 CGGCAAGCGAAAGAG CCGCGCGA CCCG TCGCGCGG AAGCCCGCGCGATCA JTY_3915 4293607 - 4294263 + | hypothetical protein JTY_3916 4294275 - 4294559 + | hypothetical protein TERM 2295 4294819 - 4294805 - g 95 -7.1 -5.41143 | CACCCGCCAAAAAAA CACCC GCCAA GGGTG CTAAGTCCGCGCCAC hns 4294666 - 4295070 + | putative histone-like protein menG 4295087 - 4295560 + | ribonuclease activity regulatory protein ethA 4297065 - 4295596 - | monooxygenase ethR 4297141 - 4297791 + | transcriptional regulatory repressor protein JTY_3921 4299000 - 4297993 - | hypothetical protein JTY_3922 4299206 - 4299009 - | hypothetical protein gltD 4301097 - 4299631 - | glutamate synthase subunit beta gltB 4305673 - 4301090 - | putative ferredoxin-dependent glutamate synthase [NADPH] large subunit TERM 2296 4306118 - 4306104 - H 77 -12.8 -3.61398 | opp_overlap 4306103 4306101 4306099 CGCCGGTGGGAACAA CCGCCG GAA CGGCGG GTATCTGTGTTGTTG JTY_3925 4306369 - 4307430 + | hypothetical protein whiB6 4308112 - 4307762 - | putative transcriptional regulatory protein WhiB-like JTY_3926 4307537 - 4307863 + | hypothetical protein JTY_3928 4308439 - 4309617 + | hypothetical alanine rich protein TERM 2297 4310460 - 4310440 - g 71 -14.7 -2.62184 | GCCTGCCCGACATCA TCGACGGCC TCT GGCCGCCGA AGTTGCCCGACATTC JTY_3929 4309860 - 4311116 + | hypothetical protein TERM 2298 4311306 - 4311286 - g 100 -12.5 -4.34402 | overlap 4311287 TGGGTGATATCAAAA GGGCGACCG ATA CGGTCGCCG GGATTAGCGGACGAG TERM 2299 4311305 - 4311287 - g 78 -16 -3.2032 | overlap 4311286 GGGTGATATCAAAAG GGCGACCG ATA CGGTCGCC GGGATTAGCGGACGA JTY_3930 4311204 - 4311515 + | hypothetical protein JTY_3931 4311518 - 4312369 + | hypothetical protein JTY_3932 4312408 - 4312959 + | hypothetical protein TERM 2300 4313633 - 4313619 - g 70 -8.5 -3.91911 | GCCAGGGCAACGAAA GCGCC GCGGT GGCGC TGCTGGAATGGTTAC JTY_3933 4312952 - 4314673 + | hypothetical protein JTY_3934 4314677 - 4316119 + | hypothetical protein JTY_3935 4316119 - 4318362 + | hypothetical protein JTY_3936 4318465 - 4319937 + | hypothetical protein JTY_3937 4320727 - 4320380 - | hypothetical protein JTY_3938 4322106 - 4320724 - | hypothetical alanine and glycine rich protein JTY_3939 4323601 - 4322213 - | hypothetical protein TERM 2301 4322292 - 4322260 - G 72 -12 -3.53012 | gap 1 CCTCGGGTGGGGAAA CCCGGCGA-ATCGGC AGCT GCCGATGCCGCGGGG TACCGATCACATTGT JTY_3940 4324938 - 4323598 - | putative secreted protease JTY_3941 4327019 - 4325160 - | putative CbxX/CfqX family protein TERM 2302 4325332 - 4325346 + g 72 -7 -4.1899 | CGTTCGATCACGTTG CGGGCG AAC CGACCG TTTTGCATAGCGTCG JTY_3942 4328702 - 4327089 - | hypothetical protein JTY_3943 4330351 - 4328699 - | putative secreted alanine and proline rich protease JTY_3944 4331865 - 4330336 - | putative transmembrane protein JTY_3945 4332524 - 4331862 - | hypothetical protein JTY_3946 4332886 - 4332521 - | hypothetical protein JTY_3947 4333810 - 4332980 - | hypothetical protein esxC 4334192 - 4333818 - | putative EsaT-6 like protein 11 TERM 2303 4333886 - 4333844 - G 100 -25 -2.80195 | opp_overlap 4333847, overlap 4333847 AGCTAGCAGCAAGCA GAAGGTGGGGCAGACGCGCG GTC CGCGCATGTACCCCACCTTC ACTCGGCCCACGGCC TERM 2304 4333883 - 4333847 - G 100 -20.9 -3.54743 | opp_overlap 4333847, overlap 4333844 TAGCAGCAAGCAGAA GGTGGGGCAGACGCGCG GTC CGCGCATGTACCCCACC TTCACTCGGCCCACG TERM 2305 4333847 - 4333883 + g 79 -16.5 -3.05384 | opp_overlap 4333847 4333844 TAGCAGCAAGCAGAA GGTGGGGCAGACGCGCG GTC CGCGCATGTACCCCACC TTCACTCGGCCCACG esxD 4334551 - 4334228 - | hypothetical protein PPE69 4335861 - 4334662 - | PPE family protein PE36 4336173 - 4335940 - | PE family protein JTY_3952 4338125 - 4336440 - | hypothetical protein JTY_3953 4340631 - 4338130 - | hypothetical protein TERM 2306 4338670 - 4338691 + g 87 -6.7 -4.98255 | gap 1, opp_overlap 4338688 ACCCTCCTGACCGAT GTGGA-TGAT CAG ATCAATCCAC TTTTTGTGGTTGGCG JTY_3954 4342119 - 4340632 - | hypothetical protein JTY_3955 4343029 - 4342163 - | hypothetical protein JTY_3956 4344168 - 4343179 - | hypothetical protein JTY_3957 4345211 - 4344330 - | hypothetical protein JTY_3959 4346490 - 4345555 - | hypothetical alanine rich protein TERM 2307 4346218 - 4346230 + g 79 -7.7 -4.53349 | GTCAGCGGCGGTATT GAAGG CGC CCTTC TTTATTTCGTACTTC TERM 2308 4346347 - 4346331 - G 70 -2.3 -4.63932 | GATTCCGCAACAAAA GATCA TGTTGGC TGATC AGATTCCTTGCGAGC JTY_3960 4346994 - 4346599 - | hypothetical protein JTY_3961 4348075 - 4347545 - | hypothetical protein JTY_3962 4350612 - 4348072 - | hypothetical alanine and proline rich protein TERM 2309 4350324 - 4350280 - G 100 -27.2 -2.88663 | gap 1 ACCCACGCCGACACA GCCGCTCGGCGG-CGGCGCCG GCAA CGGCGCCGCCCGCCCAGCGAC ATCCGACATCGCCTC esxE 4350889 - 4350617 - | putative EsaT-6 like protein 12 esxF 4351211 - 4351038 - | putative EsaT-6 like protein 13 TERM 2310 4351329 - 4351282 - R 70 -10.4 -3.57144 | gap 1 CGCCGCAGCCCTAAA GGCTG-CTGGCGCCGTCGGCG GTGCCGT CGCCGTCGGTGTCGGTCAGCC GTACGTCCCAGCGGC JTY_3965 4351786 - 4351277 - | hypothetical protein pcnA 4353253 - 4351811 - | poly(A) polymerase JTY_3967 4353629 - 4354375 + | hypothetical protein TERM 2311 4354372 - 4354354 - f 74 -11.6 -3.40522 | ACCGGGTCAGCACAA CGGTCCCG GGC CGGGGCCG TGACCGCACTGCAAC JTY_3968 4354372 - 4356780 + | hypothetical protein TERM 2312 4357821 - 4357860 + G 71 -3.4 -4.65895 | gap 1 CTGATCCCAACGGTG GCGTTCATGACGGTCGGCG GTC CGGCGATCGGTA-GCGCGC TTTTTGCATACGGCA JTY_3969 4356777 - 4360331 + | putative transmembrane protein sigMa 4360366 - 4360956 + | RNA polymerase sigma factor JTY_3972 4361049 - 4361813 + | hypothetical alanine rich protein trxB2 4361907 - 4362914 + | putative thioredoxin reductase trxC 4362911 - 4363261 + | thioredoxin JTY_3975 4363371 - 4364591 + | putative hydrolase JTY_3976 4365346 - 4364612 - | hypothetical protein parB 4366670 - 4365636 - | putative chromosome partitioning protein parA 4367710 - 4366667 - | putative chromosome partitioning protein gidB 4368381 - 4367707 - | glucose-inhibited division protein B JTY_3980 4369076 - 4368513 - | hypothetical protein similar to jag protein JTY_3981 4370248 - 4369148 - | putative inner membrane protein translocase component YidC TERM 2313 4369378 - 4369394 + g 73 -3.6 -4.63527 | overlap 4369375 4369373 CGTTGGCCGCCCGGC GCCGGA CCGCC TCCTGC TTTTTGGCCTCCTCC JTY_3982 4370594 - 4370232 - | hypothetical protein rnpA 4370968 - 4370591 - | ribonuclease P rpmH 4371108 - 4370965 - | 50S ribosomal protein L34