TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.758951 %AT, 871647 nt, 5604 terms. Intergenic: 0.783311 %AT, H2T: 106782 nt, 1049 terms; T2T: 18364 nt, 472 terms; H2H: 23910 nt, 549 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|83319253|ref|NC_007633.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome (length 1010023) dnaA 1 - 1353 + | chromosomal replication initiator protein DnaA dnaN 1518 - 2645 + | DNA polymerase III, beta subunit TERM 1 2646 - 2658 + F 100 -7.7 -5.61881 | opp_overlap 2645 TTTTTATCAAATTAG TCCAC TTA GTGGA TTTTTCTTTTTAAAA MCAP_0003 2682 - 3224 + | primase-related protein ksgA 3214 - 4014 + | dimethyladenosine transferase MCAP_0005 4069 - 5163 + | hypothetical protein TERM 2 5229 - 5215 - f 73 -4.4 -5.1383 | AATAATAGATAAAAA TATAAT ATA ATTATA AAGCCGCGATAAGAA MCAP_0007 5328 - 5771 + | cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein TERM 3 6811 - 6823 + G 73 -3.4 -5.58454 | opp_overlap 6810, overlap 6810 CAATTTATTAATATT GATG TTAAT CATC TTTTTTTACTATCAG dnaX 5851 - 7860 + | DNA polymerase III gamma-tau subunits recM 7862 - 8452 + | DNA repair protein RecM tmk 8455 - 9096 + | thymidylate kinase TERM 4 9275 - 9262 - g 70 -3.9 -5.10877 | AGAACAAATTAAAAA CAATA CACA TATTG ATATATTAACAATTG MCAP_0011 9074 - 9817 + | DNA polymerase III, delta prime subunit MCAP_0012 9877 - 10539 + | N-6 adenine-specific DNA methylases, putative MCAP_0013 10590 - 11411 + | hypothetical protein TERM 5 11459 - 11482 + G 100 -8.2 -5.88565 | opp_overlap 11462, overlap 11462 AAAAATATTTACTAG CAATATCAGG AGGA CCTGATAGTG TTTTTTTATTGTGCA TERM 6 11479 - 11462 - g 72 -8.5 -3.23042 | opp_overlap 11462 11459 AATATTTACTAGCAA TATCAGG AGGA CCTGATA GTGTTTTTTTATTGT TERM 7 11462 - 11479 + G 74 -8.5 -3.32312 | opp_overlap 11462, overlap 11459 AATATTTACTAGCAA TATCAGG AGGA CCTGATA GTGTTTTTTTATTGT TERM 8 12074 - 12062 - g 93 -4.9 -6.19302 | opp_overlap 12062 AGACAATAAAAAAAA TAGTT AAT AACTA TTTAGAACATAATCT MCAP_0014 11416 - 12621 + | hypothetical protein MCAP_0015 13454 - 12618 - | hypothetical protein TERM 9 13490 - 13476 - H 100 -11.4 -5.44721 | ACCACTTTAAAAAAA GGAGGC ATA GCCTCC TTCCAGCATAGGGGT TERM 10 14773 - 14762 - g 80 -3 -6.08342 | opp_overlap 14762 CAAGAAATAAAAAAA TTGA TCCA TCAA TTGATTGACATAGAA ftsH 13687 - 15639 + | ATP-dependent metalloprotease FtsH TERM 11 15672 - 15652 - T 100 -10.5 -5.4659 | opp_overlap 15652 TAATATAAATAAAAA CCAAGACCT ATA AAGTCTTGG TTTTTTAATACTTAG TERM 12 15652 - 15672 + T 93 -8.3 -5.2189 | opp_overlap 15652 TAATATAAATAAAAA CCAAGACCT ATA AAGTCTTGG TTTTTTAATACTTAG TERM 13 15729 - 15711 - T 73 -9 -2.52933 | opp_overlap 15711, overlap 15710 TTTCAATGCATTAAT TGGAATTA CAA TAATTCCA TCTTCTTTTCTTTTA TERM 14 15711 - 15729 + T 82 -9 -3.90186 | opp_overlap 15710 15711 TTTCAATGCATTAAT TGGAATTA CAA TAATTCCA TCTTCTTTTCTTTTA TERM 15 16699 - 16679 - T 100 -8.4 -5.80003 | opp_overlap 16679 TTAACAAATAAAAAA CCAAATAC CTAAT GTATTTGG TTTAATCTTTTATTA TERM 16 16679 - 16699 + T 80 -8.4 -4.13368 | opp_overlap 16679 TTAACAAATAAAAAA CCAAATAC CTAAT GTATTTGG TTTAATCTTTTATTA MCAP_0018 22105 - 16712 - | hypothetical protein TERM 17 17829 - 17853 + g 74 -8.1 -3.37533 | opp_overlap 17829 17828, overlap 17821 CTAATAGCTAAATAT TTAGTATTATT GTC AATAGTACTAA TTGCTGATTTTCAAG TERM 18 19149 - 19178 + g 70 -4.5 -4.99035 | gap 1, opp_overlap 19149 19153 TTACCATTTGAAATA CTAATTAGATATGA AGC TCA-ATCTAATAAG TTTTTATATAAATCA TERM 19 22164 - 22145 - H 74 -5.8 -4.87318 | gap 1 TTTAAAAGTCAAAAA CTATGC-CA TAT TGAGCATAG TGAACCATAATAATA MCAP_0019 22249 - 25407 + | hypothetical protein TERM 20 25393 - 25419 + F 90 -11 -3.64599 | opp_overlap 25399, overlap 25399 GTTATAGCTCTAGGT TATAAAGCAGCT TAA AGCTGCTTTTTA TTTAACATATAATAA TERM 21 25413 - 25399 - f 88 -10 -3.89346 | opp_overlap 25393 25399 GCTCTAGGTTATAAA GCAGCT TAA AGCTGC TTTTTATTTAACATA TERM 22 25399 - 25413 + F 100 -10 -5.28942 | opp_overlap 25399, overlap 25393 GCTCTAGGTTATAAA GCAGCT TAA AGCTGC TTTTTATTTAACATA TERM 23 26324 - 26354 + G 89 -10 -3.63991 | opp_overlap 26326, overlap 26326 GTTTTATTAATATTA AATCTTTTAAATCA AAA TGATTTAAAAGATA TTATTAAAGATGATA TERM 24 26352 - 26326 - g 100 -12.6 -3.95022 | opp_overlap 26326 26324 TTTATTAATATTAAA TCTTTTAAATCA AAA TGATTTAAAAGA TATTATTAAAGATGA TERM 25 26326 - 26352 + G 95 -12.6 -3.39784 | opp_overlap 26326, overlap 26324 TTTATTAATATTAAA TCTTTTAAATCA AAA TGATTTAAAAGA TATTATTAAAGATGA hslO 25583 - 26449 + | chaperonin HSP33 MCAP_0021 26497 - 27534 + | ABC transporter, ATP-binding protein TERM 26 27552 - 27575 + T 100 -6.8 -5.75538 | opp_overlap 27557 TAAAATTTAGTAATA AAAAATGCAC TTAG GTGCATTTTA TTTTTGTTTTTTAAA TERM 27 27570 - 27557 - T 93 -6.7 -5.5112 | opp_overlap 27552 TTTAGTAATAAAAAA TGCAC TTAG GTGCA TTTTATTTTTGTTTT MCAP_0022 28185 - 27586 - | acyl carrier protein phosphodiesterase, putative MCAP_0023 28374 - 28580 + | cold shock protein TERM 28 28618 - 28597 - f 80 -8.9 -3.68827 | opp_overlap 28597 TATTTATTAGTTAAA TATCAGATA ATAC TATCTGATA TTTTTTTATTTTAAT TERM 29 28597 - 28618 + F 100 -8.9 -6.11229 | opp_overlap 28597 TATTTATTAGTTAAA TATCAGATA ATAC TATCTGATA TTTTTTTATTTTAAT TERM 30 28836 - 28805 - g 79 -9 -3.50466 | AAAAATATGAAGTAA TGTATATTTTAGAT CAAG ATCTAAAAGATACA AAAGAACTAGTAGCA rpsF 28783 - 29196 + | 30S ribosomal protein S6 ssb 29212 - 29652 + | single-strand DNA-binding protein rpsR 29671 - 29898 + | 30S ribosomal protein S18 TERM 31 29942 - 29912 - f 100 -15.7 -3.76759 | opp_overlap 29919, overlap 29919 AGTAATTTTAGCAAA TAAAAAAGCTGCC AAAAG GGCAGCTTTTTTA TGTCCAATAAATCAG TERM 32 29935 - 29919 - f 100 -9.4 -5.68438 | opp_overlap 29919, overlap 29912 TTAGCAAATAAAAAA GCTGCC AAAAG GGCAGC TTTTTTATGTCCAAT TERM 33 29919 - 29935 + F 100 -9.4 -5.37043 | opp_overlap 29919 29912 TTAGCAAATAAAAAA GCTGCC AAAAG GGCAGC TTTTTTATGTCCAAT TERM 34 30011 - 30026 + F 81 -7.6 -4.63479 | opp_overlap 30011 30010, overlap 30006 GATCCATATTTAAAC TTGCTG TTTC CAGCAA TTTTAGTTTATCATA MCAP_0027 30594 - 31982 + | hypothetical protein TERM 35 31974 - 31989 + F 76 -4.8 -5.4251 | TATTGAGTACATATT GAAAAA TAGT TTTTTC TTTTTTATATATCAA TERM 36 32166 - 32143 - f 86 -9.6 -4.33281 | opp_overlap 32148, overlap 32148 ATTTTAAAGAAATAA TAAAAGCGCC AATA GGCGCTTTTT TGGTGCAATAAGATT TERM 37 32148 - 32161 + F 100 -9.5 -5.15634 | opp_overlap 32148 32143 AAAGAAATAATAAAA GCGCC AATA GGCGC TTTTTTGGTGCAATA TERM 38 32161 - 32148 - f 95 -9.5 -5.10765 | opp_overlap 32148, overlap 32143 AAAGAAATAATAAAA GCGCC AATA GGCGC TTTTTTGGTGCAATA TERM 39 32214 - 32193 - f 70 -4.6 -5.10767 | opp_overlap 32193 32201 32204, overlap 32204 32213 GATTCAATATAAAAA TATTTACA TAATAT TGTAAATA TTTACAATATGAGTT TERM 40 33713 - 33703 - g 83 -6.8 -5.18726 | opp_overlap 33703 TTTGCACAACAAAAA GCAC CAA GTGC TTATATATATCCTGT MCAP_0028 32257 - 33810 + | PTS system, mannitol-specific IIBC component, putative TERM 41 33840 - 33865 + G 78 -8.5 -3.85909 | ATTATTGCAGGAGGA GCTAAAAGTTT AGGT AAATTTTTAGC TTTAGGTTTAGATAA MCAP_0029 33810 - 34568 + | sorbitol-6-phosphate dehydrogenase MCAP_0030 34568 - 34813 + | PTS system, mannitol-specific IIA component, putative MCAP_0031 35027 - 35824 + | RpiR family phosphosugar-binding transcriptional regulator , putative TERM 42 36306 - 36283 - g 70 -4 -5.14163 | opp_overlap 36283, overlap 36285 AGTTAGTAATAAAAA TATTCTAAAT AATT ATTTAGAATG TGAAGATTATTATTT TERM 43 36304 - 36285 - g 73 -6.6 -4.19587 | opp_overlap 36283, overlap 36283 TTAGTAATAAAAATA TTCTAAAT AATT ATTTAGAA TGTGAAGATTATTAT TERM 44 36802 - 36850 + G 80 -8.5 -4.29139 | opp_overlap 36817, overlap 36817 AGAATATTTAAAAAT TGAAAAAGAAAAAAACCTAGATT TCT AGTCTAGGTTTTTTATTATTTTA TTATTTTAAATTTCA MCAP_0032 35825 - 36829 + | mannitol-1-phosphate 5-dehydrogenase, putative TERM 45 36835 - 36817 - T 100 -6 -6.20267 | opp_overlap 36817 36802 TGAAAAAGAAAAAAA CCTAGATT TCT AGTCTAGG TTTTTTATTATTTTA TERM 46 36817 - 36835 + T 100 -8.2 -5.77677 | opp_overlap 36817, overlap 36802 TGAAAAAGAAAAAAA CCTAGATT TCT AGTCTAGG TTTTTTATTATTTTA MCAP_0033 38458 - 36866 - | lipoprotein, putative (LppA) TERM 47 37413 - 37401 - G 78 -7.7 -4.33165 | opp_overlap 37401 CTAAATCCATTAAAA GTGTG TTT CACAC TTATTGTTGGTTCAT TERM 48 37401 - 37413 + g 77 -7.7 -4.04023 | opp_overlap 37401 CTAAATCCATTAAAA GTGTG TTT CACAC TTATTGTTGGTTCAT MCAP_0034 40042 - 38483 - | LppA family lipoprotein TERM 49 39613 - 39597 - G 73 -6.7 -4.25873 | opp_overlap 39596 39597 TCTCTATAAAAAATA TTAGAAA ATG TTTCTAA GTCATTTTTTAAACT TERM 50 39737 - 39759 + g 86 -9.2 -4.03253 | overlap 39735 ATTATGATGATTTGG CTGATCAGCT TGT GGTTGATCAG TATTTTCTCTTTCTG TERM 51 39771 - 39781 + g 73 -3.2 -5.59564 | TCAGTATTTTCTCTT TCTG AAT CAGG TTTTTTTGGCTTTAT TERM 52 39810 - 39823 + g 70 -3.1 -5.38047 | overlap 39811 ATGTTATTTTTATTA TCAGA AGCA TCTGG TTTTTTCTCTGAATC metG 40240 - 41769 + | methionyl-tRNA synthetase TERM 53 41775 - 41795 + F 84 -4 -6.28401 | opp_overlap 41767 TAAAGATTAAAAAGA TCTCAAGT TTTTT GCTTGGGA TTTTTTTATTTTTTA TERM 54 41895 - 41881 - f 73 -4.4 -5.22312 | opp_overlap 41881 41888 41889, overlap 41888 41889 ATTTATATTAAAAAA TAAAAA ACC TTTTTA CTTTTAAAAAGATTT TERM 55 41907 - 41888 - f 85 -4.4 -6.04324 | opp_overlap 41881 41888 41889, overlap 41881 41889 TTAAAAAATAAAAAA CCTTTTTA CTTT TAAAAAGA TTTTCACATAAAAAT TERM 56 42043 - 42029 - f 72 -8.6 -2.79803 | overlap 42028 42031 TAATTTCATGTAAAG CAGCAA GTT TTGCTG AAGGTGTACTAGGTC TERM 57 44205 - 44195 - g 75 -5.4 -5.05712 | overlap 44188 ACAAATAATGAAAAA CCTT CAA AAGG CAGGTAAAACTATTA MCAP_0037 43614 - 45221 + | ABC transporter, ATP-binding protein TERM 58 46385 - 46398 + G 70 -3.9 -5.2197 | opp_overlap 46381 46385 46388 46397, overlap 46388 ATCTTTTAAAATTAA GATTT AAAA AAATC TTTTTAATTTTTATA TERM 59 46418 - 46397 - g 70 -2.5 -5.52909 | gap 1, opp_overlap 46385 46388, overlap 46385 46388 TAAGATTTAAAAAAA TCTTTT-TAA TTT TTATAAAAGA GTATAAACAACAAGT MCAP_0038 45211 - 47769 + | ABC transporter, permease protein MCAP_0039 47772 - 48749 + | ABC transporter, permease protein TERM 60 48809 - 48789 - T 89 -5.4 -5.56112 | opp_overlap 48789 ATAAAAATTAAAAAA CCGAACTT TTATG ATGTTCGG TTTTTTTCTAATCTT TERM 61 48789 - 48809 + T 95 -6.1 -5.70829 | opp_overlap 48789 ATAAAAATTAAAAAA CCGAACTTT TAT GATGTTCGG TTTTTTTCTAATCTT gyrA 51204 - 48817 - | DNA gyrase, A subunit gyrB 53240 - 51336 - | DNA gyrase, B subunit TERM 62 52090 - 52100 + g 71 -5.4 -4.62471 | CTTGCTCTTTGAGCT GCAA TTC TTGC TTTTTGAGCATTAAC TERM 63 52395 - 52417 + g 70 -7.8 -3.31565 | overlap 52394 TTGTTTTAAACCATC CTCATGAG TTCCACC CTCATGAG TGTTAATATTATTTA TERM 64 53299 - 53317 + r 73 -9 -2.75865 | opp_overlap 53290 53298 53299 53301, overlap 53290 53303 TTACAATAATATAAT TATACCTT AAA AAGGTATA TAACTTGTTTTAAAA TERM 65 53317 - 53299 - R 74 -9 -2.91696 | opp_overlap 53290 53299 53303, overlap 53290 53298 53301 TTACAATAATATAAT TATACCTT AAA AAGGTATA TAACTTGTTTTAAAA TERM 66 53377 - 53356 - R 100 -8.8 -5.66989 | opp_overlap 53356 TAAATAGTAAAAAAA CCCTGTAT TTTTAG ATACAGGG TTATACTATTGGAAA TERM 67 53356 - 53377 + r 80 -9.5 -3.52073 | opp_overlap 53356 TAAATAGTAAAAAAA CCCTGTATT TTTA GATACAGGG TTATACTATTGGAAA TERM 68 53636 - 53646 + r 74 -5.4 -4.80455 | TAGCTTTATTATTAG GCAA TTA TTGC TTTTCTATTTCGCTA MCAP_0042 55241 - 53640 - | putative lipoprotein TERM 69 54390 - 54403 + g 75 -3.9 -5.48623 | TTTTTTAAAACTATC TTCAA CACT TTGAA TTTTTGTTTCTATTT MCAP_0043 56182 - 55409 - | hypothetical protein MCAP_0044 56888 - 56166 - | hypothetical protein TERM 70 56436 - 56468 + g 80 -9.5 -3.13299 | opp_overlap 56447, overlap 56435 ACCTATTAGTCTACT TTTTTTAGAAATAAT CAT ATTAGTTCTAAAAAA TATTAAATATAATAG TERM 71 57000 - 56963 - R 77 -9.5 -3.16191 | opp_overlap 56971, overlap 56971 TTATATGCTTATTAA TAAAAAAAGTGTTACAA AAAT TTATAACACTTTTATTA ACCTATTTTAACTTT TERM 72 56992 - 56971 - R 100 -6.7 -5.84381 | opp_overlap 56971, overlap 56963 TTATTAATAAAAAAA GTGTTACAA AAAT TTATAACAC TTTTATTAACCTATT secA 59832 - 56998 - | preprotein translocase subunit SecA TERM 73 57129 - 57141 + g 70 -4.9 -4.89339 | opp_overlap 57129 CATCTTTTGCTATAA CTAAA TGT TTTAG TTTTTCTGGATCGTT TERM 74 59531 - 59517 - G 71 -8.6 -2.98524 | opp_overlap 59512 59519, overlap 59516 59513 59519 AAGCATTTAAATAAG CAGGAA AGA TTCCTG TTAAAGTTTTACCTT TERM 75 60225 - 60215 - g 71 -5.4 -4.63218 | opp_overlap 60215 TTTGGTGGAATAAAA CTAG GAG CTAG TGTATTAAGTAGAAC MCAP_0046 59912 - 60487 + | hypothetical protein MCAP_0047 60583 - 61497 + | 5-3 exonuclease family protein TERM 76 61484 - 61505 + F 100 -8.8 -5.59962 | opp_overlap 61484 AAAGTAATAAAAAAA CAGTGAAC AAATAA GTTCACTG TTTTTATTTATTTTA TERM 77 61505 - 61484 - f 100 -8.8 -5.9003 | opp_overlap 61484 AAAGTAATAAAAAAA CAGTGAAC AAATAA GTTCACTG TTTTTATTTATTTTA MCAP_0048 61692 - 62708 + | adenine-specific DNA methylase, putative dam 62638 - 63615 + | DNA adenine methylase TERM 78 63986 - 63972 - g 76 -2.8 -5.85737 | ATATGAATAAAAAAA TTGAAG TAT CATCAA GTGGTCATATGTTAT TERM 79 64092 - 64068 - g 72 -3.8 -5.43487 | gap 1 AAAGGATACAAAAAA TATTTC-TCAA TGCA TTGATGAAATA CCAAACAAATAATCC MCAP_0050 63593 - 65170 + | restriction endonuclease TERM 80 65983 - 65959 - f 74 -3.6 -5.61277 | opp_overlap 65962 TATAAAAAAATAAAA CAAGAACTTC AAATA GAAGATCTTA ATAGATATGGAATAT TERM 81 66730 - 66712 - g 70 -6 -4.36343 | overlap 66714 TAATCAAGTAAGAAA TTCTTGAG TTA CTCAAGGA ACACAAGCAGCAGGA MCAP_0052 66644 - 67114 + | hypothetical protein TERM 82 67518 - 67508 - f 75 -4 -5.626 | TATTTTACAAAAAAA CAAT GGA ATTG CATATAAATTTTTCA TERM 83 67611 - 67629 + F 81 -7.5 -4.72272 | opp_overlap 67614, overlap 67607 67628 ACCATTTAGTTTGTA GAACTAC ATTTA GTAGTTC TTTTTAGTGCAAAAA TERM 84 67715 - 67674 - f 78 -7.5 -4.26076 | opp_overlap 67688 TTATTGTCAGGAAAA CTTTTTAAAATTAAGGGTA AAAT TACCCTTTTTATTAAAAAG TTAAAAAAGAATATT TERM 85 67688 - 67701 + F 83 -6.7 -5.06816 | opp_overlap 67674 ACTTTTTAAAATTAA GGGTA AAAT TACCC TTTTTATTAAAAAGT MCAP_0053 67839 - 68114 + | hypothetical protein TERM 86 68343 - 68326 - g 76 -2.1 -5.8187 | overlap 68327 TATTTAAGAAAAAAA CTTTTTA CAAA TAAAAAA CTAAAACAAAAAGTT TERM 87 68473 - 68501 + G 80 -8.4 -4.2008 | opp_overlap 68473 68472 68464 68476, overlap 68474 CTAAACTTAACTAAT TTAGATTTAACT GTTAA AGTTAAATCTAG TTTATTAAAATCTAT TERM 88 68474 - 68500 + G 78 -9.7 -3.11325 | opp_overlap 68473 68472 68464 68476, overlap 68473 TAAACTTAACTAATT TAGATTTAACT GTTAA AGTTAAATCTA GTTTATTAAAATCTA MCAP_0054 68104 - 68670 + | dephospho-CoA kinase TERM 89 68674 - 68658 - T 84 -5.2 -5.76633 | opp_overlap 68658 TTATATACAAAAAAA TAGGTT GTTAT AACCTA TTTTTTTAATTCTTT TERM 90 68658 - 68674 + T 100 -5.9 -5.73672 | opp_overlap 68658 TTATATACAAAAAAA TAGGTTG TTA TAACCTA TTTTTTTAATTCTTT MCAP_0055 69481 - 68672 - | hemolysin A TERM 91 69013 - 69001 - G 79 -4.9 -5.58209 | TTAAAGGTAAAAAAA TCTTT TCT AAAGA AATAAAACTTACATC TERM 92 69124 - 69106 - G 73 -7.6 -3.78034 | opp_overlap 69099 GACTCATATTAATAA CTTTTAAA TTA TTTAAAAG TGATGAGTGTAATTG MCAP_0056 69696 - 69481 - | hypothetical protein xseA 71095 - 69689 - | exodeoxyribonuclease VII, large subunit MCAP_0058 71495 - 71097 - | N utilization substance protein B (nusB), putative MCAP_0059 72577 - 71507 - | putative lipoprotein MCAP_0060 73473 - 72604 - | endonuclease IV TERM 93 72680 - 72714 + g 86 -9.6 -3.85698 | opp_overlap 72680 TTTTTGTCTATATAA GGTGTTTCTAATATTT TTG AAATATTAGAAAAATC TTTATCAAAAACCAC MCAP_0061 74218 - 73466 - | riboflavin kinase / FAD synthetase family protein TERM 94 73510 - 73524 + g 75 -5.8 -4.91873 | AACATTCTTTTTTAT CATTAT TTA ATAATG TTTTTAATTGATCTA TERM 95 74279 - 74254 - H 75 -6.3 -4.61566 | opp_overlap 74261, overlap 74261 TTTTAAAGTATAAAA TAAAAAAGACT TAAA AGTCTTTTTTT GTGTTATCAAAAATG TERM 96 74261 - 74272 + H 82 -4.4 -5.84432 | opp_overlap 74261 74254 GTATAAAATAAAAAA GACT TAAA AGTC TTTTTTTGTGTTATC TERM 97 74272 - 74261 - H 82 -4.4 -5.86976 | opp_overlap 74261, overlap 74254 GTATAAAATAAAAAA GACT TAAA AGTC TTTTTTTGTGTTATC TERM 98 74608 - 74627 + H 100 -4.4 -7.14698 | opp_overlap 74617 CTATTTTATGGGATT TTAGAACT ATTA AGTTTTAA TTTTTTTTTTTTTTT TERM 99 76153 - 76141 - g 70 -3.4 -5.40873 | opp_overlap 76141 AAGATAAAAATAAAA TACC ACTAA GGTA TGTGATATTGCATTC MCAP_0063 74775 - 76349 + | glycosyl transferase, group 2 family protein MCAP_0064 76352 - 77230 + | UTP-glucose-1-phosphate uridylyltransferase TERM 100 77249 - 77266 + F 100 -8.5 -6.01725 | opp_overlap 77246 77249 TACTAAACTAACTTA GATGCTT ATTC AAGCATC TTTTTTATTTTTATT TERM 101 77266 - 77249 - f 71 -8.5 -2.64134 | opp_overlap 77249, overlap 77246 TACTAAACTAACTTA GATGCTT ATTC AAGCATC TTTTTTATTTTTATT rplK 77432 - 77860 + | 50S ribosomal protein L11 rplA 77860 - 78540 + | 50S ribosomal protein L1 TERM 102 78551 - 78570 + F 82 -5 -5.64274 | opp_overlap 78551 78554 TTTAATAACCTATAA CAGCTCAT TTAT GTGAGTTG TTTTTTTGTAAATAA TERM 103 78684 - 78697 + F 78 -3.9 -5.86976 | opp_overlap 78684 TACCGAGGAAAAACT TGTTT TAAA AAACA TTTTTTGTTTTGTCC TERM 104 78711 - 78736 + F 100 -7.7 -6.25578 | gap 1 CATTTTTTGTTTTGT CCTTGGTTTAGT GTT ACTAG-CCAAGG TTTTTTTTATTTAAT rplJ 78769 - 79266 + | 50S ribosomal protein L10 TERM 105 79496 - 79513 + G 74 -8.5 -3.46511 | opp_overlap 79489, overlap 79499 CTACAAATGCTGCTC CAACTGA AGTT TCAGTTG TTATGACTTCTGTAG TERM 106 79675 - 79700 + G 72 -7.7 -3.63895 | opp_overlap 79675 79670 79669, overlap 79679 GAAATGAAAGCTAAA TTAGTTGAAGC TGGA GCTTCAATTGA TTTAAAATAGTTAAA TERM 107 79679 - 79696 + G 75 -8.5 -3.53298 | opp_overlap 79675 79670 79669, overlap 79675 TGAAAGCTAAATTAG TTGAAGC TGGA GCTTCAA TTGATTTAAAATAGT rplL 79342 - 79710 + | 50S ribosomal protein L7/L12 TERM 108 79735 - 79752 + F 87 -7 -5.14985 | opp_overlap 79735 TAAATAAATTTTAAA CTCACC ACAATG GGTGAG TTTTTGTGTGTTTAA TERM 109 79752 - 79735 - f 71 -7 -3.78141 | opp_overlap 79735 TAAATAAATTTTAAA CTCACC ACAATG GGTGAG TTTTTGTGTGTTTAA MCAP_0069 79881 - 81053 + | hypothetical protein TERM 110 82134 - 82150 + G 73 -6.7 -4.19704 | opp_overlap 82134 82133 ATTAAAGCAAAAACT TTCTATT AAA AATAGAA TTTTAAATAAAGTTA TERM 111 84643 - 84623 - g 88 -8.3 -4.8048 | opp_overlap 84630 TTGTTAGATCAAAAA GAATTCCTG AAC CTGGAATTC CAGAATCATTTAATG rpoB 81043 - 84906 + | DNA-directed RNA polymerase subunit beta TERM 112 88127 - 88103 - g 75 -7.3 -4.21792 | opp_overlap 88106 88108, overlap 88101 88108 AGAAGTTAAAAAATA TAAAACTGAAT TTA ATTCAGTATTA CGTGTTGAACAAGGA TERM 113 88122 - 88108 - g 83 -7.2 -5.06052 | opp_overlap 88106 88108, overlap 88103 88101 TTAAAAAATATAAAA CTGAAT TTA ATTCAG TATTACGTGTTGAAC rpoC 84918 - 88685 + | DNA-directed RNA polymerase beta' subunit TERM 114 88723 - 88683 - f 78 -10.1 -2.61042 | opp_overlap 88694 88715, overlap 88694 CATAACAATGAATAT TAATAATTAAATCTCATTT ACA AAATGAGATTTTTTTATTA TGAAAATATTAGTAT TERM 115 88712 - 88694 - f 82 -9 -4.10407 | opp_overlap 88694, overlap 88683 ATATTAATAATTAAA TCTCATTT ACA AAATGAGA TTTTTTTATTATGAA TERM 116 88694 - 88712 + F 100 -9 -5.88565 | opp_overlap 88694 88683 ATATTAATAATTAAA TCTCATTT ACA AAATGAGA TTTTTTTATTATGAA MCAP_0072 88775 - 90964 + | putative lipoprotein TERM 117 90977 - 90962 - T 79 -4.8 -5.67283 | AATCCAAATAAAAAA TAGTTA TTTC TAACTA CTAAAAAGTCCAGCT MCAP_0073 91276 - 90971 - | hypothetical protein TERM 118 91696 - 91660 - g 76 -9.5 -2.87654 | opp_overlap 91668, overlap 91654 91666 AAGAATTCATAATGA TGCAAACATTATAGCAC TAG GAGCTAGAATGATTGCA ATACCAAAAGCTATA MCAP_0074 91301 - 91798 + | ribose 5-phosphate isomerase B, putative glyA 91782 - 93023 + | serine hydroxymethyltransferase TERM 119 93030 - 93047 + F 77 -5.6 -5.00616 | overlap 93033 AAATACTAATTTTAA GTACTC TTTTTT GAGTAC TTTTTTAAAAAAGGG upp 93125 - 93748 + | uracil phosphoribosyltransferase TERM 120 93779 - 93763 - f 77 -8.1 -3.98172 | opp_overlap 93763 ATTAAGATTTATAAA TGATACA TTA TGTATCA TTTTTTTTATTTACT TERM 121 93763 - 93779 + F 100 -8.1 -6.25578 | opp_overlap 93763 ATTAAGATTTATAAA TGATACA TTA TGTATCA TTTTTTTTATTTACT MCAP_0077 93889 - 94287 + | hypothetical protein atpB 94287 - 95147 + | F0F1 ATP synthase subunit A atpE 95186 - 95491 + | ATP synthase F0, subunit c atpF 95519 - 96064 + | ATP synthase F0, B subunit atpH 96066 - 96611 + | F0F1 ATP synthase subunit delta TERM 122 97853 - 97839 - g 73 -7.2 -4.05208 | opp_overlap 97823 ATTTAGATGAAACAA CTAAAG CTA CTTTAG ATCAAGGTGCAAAAA atpA1 96623 - 98200 + | F0F1 ATP synthase subunit alpha atpG 98202 - 99044 + | F0F1 ATP synthase subunit gamma atpD1 99053 - 100483 + | F0F1 ATP synthase subunit beta atpC 100483 - 100782 + | ATP synthase F1, epsilon subunit TERM 123 100791 - 100827 + T 100 -16.9 -5.28166 | opp_overlap 100791 AATATAATAAAAAAA CCTATACTATATCTAGT TAG ACTAGTTATAGTATAGG TTTTTATTAATTTTA TERM 124 100827 - 100791 - T 100 -16.9 -5.94214 | opp_overlap 100791 AATATAATAAAAAAA CCTATACTATATCTAGT TAG ACTAGTTATAGTATAGG TTTTTATTAATTTTA MCAP_0086 102051 - 100840 - | hypothetical protein TERM 125 101418 - 101430 + g 77 -4.9 -5.38249 | CTGTTCTTTGTTGCA TATCT TTT AGATA TTTTTTATAGTTACT mgtA 102390 - 105218 + | magnesium-translocating P-type ATPase TERM 126 105243 - 105266 + T 100 -9 -5.54338 | opp_overlap 105243 AAATAAATTATTTAA GTTCAAATAC ATAA GTGTTTGAAC TTTTTATTTTGCTTA MCAP_0088 105813 - 105679 - | hypothetical protein TERM 127 106538 - 106519 - g 77 -7.2 -4.45068 | opp_overlap 106519 ATCTGTAACAAGAAA CAGAGAAA CAAT TTTCCCTG ATTTAGTATTTAAAC arcA 105998 - 107209 + | arginine deiminase arcB 107227 - 108222 + | ornithine carbamoyltransferase, catabolic MCAP_0091 108285 - 109754 + | transporter, putative TERM 128 110158 - 110172 + T 74 -7.2 -3.97636 | opp_overlap 110158 TTAAATAATAAAAAA GTAGTT AAT AACTAC TTTGTAAGTTCAAAT TERM 129 110172 - 110158 - T 100 -7.2 -5.72254 | opp_overlap 110158 TTAAATAATAAAAAA GTAGTT AAT AACTAC TTTGTAAGTTCAAAT TERM 130 110180 - 110203 + T 100 -11.2 -5.66338 | ATAACTACTTTGTAA GTTCAAATGT TAAT ACATTTGAAC TTTTTTATTATATTT TERM 131 111164 - 111174 + T 72 -2.6 -5.77856 | AGTTCCACCAAGATC TATT CCT AATA TTTTTTTCATTTATT MCAP_0093 112403 - 111276 - | beta-lactamase, putative TERM 132 112293 - 112309 + g 80 -3.1 -5.88197 | ATCATTATATCCAAA TTGTTTA GCA TAAATAA TTTTTTTGTCTTTAG TERM 133 112486 - 112458 - R 76 -3.4 -5.7946 | gap 1 TCGCTAATAAAAAAA TACTCAATTCTAT ATAG ACA-AATTGAGTA TTTTATTAAGTATTA ptsG 114721 - 112508 - | PTS system, glucose-specific IIABC component MCAP_0095 115629 - 115141 - | hypothetical protein smpB 116075 - 115629 - | SsrA-binding protein MCAP_0097 118199 - 116085 - | 3'-5' exoribonuclease TERM 134 116891 - 116905 + g 82 -5.7 -5.52079 | GTTCAATTAATTTTT CAGCT TGATC AGCTG TTTTTGTTTTAATAT TERM 135 117974 - 117997 + g 80 -9.8 -2.90494 | opp_overlap 117957 117978, overlap 117973 117978 TATTAATATCATTTA TAAATCCAAA ACCT TTTGGATTTA GTTTAATAGTTCCCT TERM 136 118050 - 118071 + g 79 -3.9 -5.71983 | GTAAATATTATTTTC TAATGAAAT AGTG ATTTTATTA TTTTTTTCTAATTGG TERM 137 118251 - 118224 - R 75 -2.8 -5.95539 | opp_overlap 118228, overlap 118228 TTTTAAATAAAAAAA TAAACACTATTT TATA ACATAGTGTTTG TAATGATGCTTATTG TERM 138 118247 - 118228 - R 71 -3.6 -5.36181 | opp_overlap 118228, overlap 118224 AAATAAAAAAATAAA CACTATTT TATA ACATAGTG TTTGTAATGATGCTT secG 118591 - 118235 - | preprotein translocase subunit SecG nrdF 118773 - 119792 + | ribonucleotide-diphosphate reductase subunit beta nrdI 119802 - 120275 + | ribonucleotide reductase stimulatory protein TERM 139 120352 - 120336 - g 72 -8.1 -3.13743 | opp_overlap 120329 120331 AAATGCTAGATCTAA GATCTTT TCA AAAGATC AAGATAATTTTCAAT TERM 140 120645 - 120666 + G 77 -6.7 -4.68994 | opp_overlap 120645 120647 AGAAACTTATACAGA TAGAGTATT AATG AATGCTCTA TTTTTAGGTAATGGT nrdE 120262 - 122424 + | ribonucleotide-diphosphate reductase subunit alpha TERM 141 122523 - 122501 - f 70 -5.1 -4.80882 | opp_overlap 122503 ATGTTACATTAAAAA TATAAATAT CTTGT ATATTTATA ATATTGGCAGTGTGG TERM 142 122595 - 122615 + F 100 -8.4 -5.9667 | opp_overlap 122595 GATTGAACCAAAAAA CAACTCTT TTTAT AAGAGTTG TTTTTTTATCTTTTT TERM 143 122615 - 122595 - f 95 -8.4 -5.28481 | opp_overlap 122595 GATTGAACCAAAAAA CAACTCTT TTTAT AAGAGTTG TTTTTTTATCTTTTT prs 122709 - 123743 + | phosphoribosylpyrophosphate synthase TERM 144 124370 - 124360 - g 78 -5.4 -5.16572 | ATCCAATTTAAAAAA GATG GTT CATC AGCAGGACATAATGG TERM 145 124538 - 124516 - g 78 -9.4 -2.97743 | opp_overlap 124529, overlap 124515 124529 GATGATGAATTAAAT TTATTAAAAG AAT CTTTTAATAA TAAAAGTGAATTTAT pth 124048 - 124608 + | peptidyl-tRNA hydrolase TERM 146 124610 - 124626 + F 100 -6.6 -5.66229 | opp_overlap 124610 ACAAATATAATTAAA CTTCGT ATTAA ACGAAG TTTTTTATTATTAAT TERM 147 124626 - 124610 - f 71 -6.6 -4.12405 | opp_overlap 124610 ACAAATATAATTAAA CTTCGT ATTAA ACGAAG TTTTTTATTATTAAT rplI 124739 - 125182 + | 50S ribosomal protein L9 dnaC 125184 - 126512 + | replicative DNA helicase MCAP_0108 126601 - 127863 + | hypothetical protein TERM 148 127922 - 127939 + F 80 -7.7 -4.40804 | opp_overlap 127922 127913 TAATAAGTTAATCAA GTGTGGG ATGG TCCACAC TTTTATAACGTGATG MCAP_0109 127990 - 128916 + | hypothetical protein TERM 149 130050 - 130040 - g 70 -4 -5.25906 | opp_overlap 130040 ACAAATTAATAAAAA TATC CTT GATA ATATTTCTGATAATT cysS 128925 - 130250 + | cysteinyl-tRNA synthetase MCAP_0111 130252 - 130986 + | RNA methyltransferase rpmG 131047 - 131208 + | 50S ribosomal protein L33 secE 131208 - 131522 + | preprotein translocase, SecE subunit, putative nusG 131539 - 132183 + | transcription antitermination protein NusG TERM 150 132224 - 132209 - f 71 -6.2 -4.21194 | opp_overlap 132209 TTGGATCAGTGAAAA CTAGTT TTAG AACTAG TTTTTTTTATTTTTT TERM 151 132209 - 132224 + F 100 -6.2 -6.47325 | opp_overlap 132209 TTGGATCAGTGAAAA CTAGTT TTAG AACTAG TTTTTTTTATTTTTT TERM 152 132269 - 132247 - f 71 -5.8 -4.57073 | opp_overlap 132225 132230, overlap 132224 TATTTTTTTTAAAAA TAAAAAATAA GGT TTACTTTTTA AAATATTACTAAATT TERM 153 132319 - 132307 - f 70 -4.1 -5.25772 | opp_overlap 132308, overlap 132308 AAATTATAAGAAAAA CCCTT AAA AAAGG CGTTTTTTACAATTA TERM 154 135361 - 135350 - g 86 -4.4 -5.87996 | TAAGTAACAAAAAAA GAAG ATTT CTTC AAGATTTTGCTGGAT TERM 155 137655 - 137640 - g 76 -6.2 -4.75174 | opp_overlap 137639 TAGTGAAGCTAAAAA TAAAGC TGAA GCTTTA AATTTAAAATATCGT MCAP_0115 132631 - 138528 + | hypothetical protein MCAP_0116 138537 - 141491 + | oligopeptide ABC transporter, oligopeptide-binding protein, putative TERM 156 141558 - 141547 - g 73 -4.4 -5.20216 | TACATTACCAAAAAA TGCT ATAG AGCA TAAACAATATGTAGA MCAP_0117 141491 - 142564 + | oligopeptide ABC transporter, permease protein MCAP_0118 142566 - 143576 + | oligopeptide ABC transporter, permease protein MCAP_0119 143655 - 145028 + | oligopeptide ABC transporter, ATP-binding protein TERM 157 145644 - 145618 - g 84 -9.6 -3.7829 | opp_overlap 145617 145618 ATTATACTGATCAAA TGGCTAAGTTAA CAT TTAACTTAGACA ATTCTTATAAAGTTG TERM 158 145618 - 145644 + G 76 -9.6 -2.88832 | opp_overlap 145618, overlap 145617 ATTATACTGATCAAA TGGCTAAGTTAA CAT TTAACTTAGACA ATTCTTATAAAGTTG TERM 159 145836 - 145824 - g 70 -6.3 -4.24404 | ATTGAAATTTTAAAA CAAGT CGG ACTTG ATGAAAGTGTATTGT TERM 160 146030 - 146016 - g 73 -2.2 -5.65927 | GAGTTAAAGAAAAAA TATAAT TTA ACTATA TTATTTATTGCTCAT MCAP_0120 145104 - 146357 + | oligopeptide ABC transporter, ATP-binding protein TERM 161 146383 - 146355 - T 82 -8.3 -4.71307 | opp_overlap 146361, overlap 146361 CAAAAATTAAATAAA TAAAAAGCTAGTT ATA AACCAGCTTTTTT TAATCTTAATTATTA TERM 162 146377 - 146361 - T 100 -7.3 -5.5454 | opp_overlap 146361, overlap 146355 TTAAATAAATAAAAA GCTAGTT ATA AACCAGC TTTTTTTAATCTTAA TERM 163 146361 - 146377 + T 82 -5.1 -5.63374 | opp_overlap 146361 146355 TTAAATAAATAAAAA GCTAGTT ATA AACCAGC TTTTTTTAATCTTAA MCAP_0121 146817 - 146389 - | hypothetical protein MCAP_0122 146872 - 147651 + | hypothetical protein TERM 164 148389 - 148369 - g 78 -9.9 -2.55069 | overlap 148368 148371 AATTTGTAAATAGAG TAGCAAAAA TTA TTTTTGCTA TAGAAAATCAAAAAA MCAP_0123 147705 - 149243 + | ABC transporter, ATP-binding protein TERM 165 149249 - 149269 + T 75 -4 -5.59357 | opp_overlap 149249 AGTTGAATAAAAAAA CGAGAATT CAATA ACTTCTCG TTTTTTTAATATGAT TERM 166 149269 - 149249 - T 82 -4.7 -5.80364 | opp_overlap 149249 AGTTGAATAAAAAAA CGAGAATTC AAT AACTTCTCG TTTTTTTAATATGAT MCAP_0124 150072 - 149275 - | TatD family hydrolase ilvA 150259 - 151485 + | threonine dehydratase MCAP_0126 151701 - 153290 + | hypothetical protein MCAP_0127 153295 - 154158 + | hypothetical protein TERM 167 154189 - 154156 - f 100 -9.2 -5.77853 | gap 1, opp_overlap 154156 154164 AAGGTTGAAAAAAAA TAATAAAATCAGCAC AATTA GTGCTGATTTT-TTA TATTTTTAAAATGAT TERM 168 154156 - 154189 + F 82 -9.2 -3.93148 | gap 1, opp_overlap 154156, overlap 154164 AAGGTTGAAAAAAAA TAATAAAATCAGCAC AATTA GTGCTGATTTT-TTA TATTTTTAAAATGAT TERM 169 154164 - 154182 + F 100 -8.9 -5.69068 | opp_overlap 154156, overlap 154156 AAAAAAATAATAAAA TCAGCAC AATTA GTGCTGA TTTTTTATATTTTTA TERM 170 154463 - 154433 - g 78 -5.5 -5.18643 | opp_overlap 154432 154433 154456 TCAAGTAAAACAAAA TCCGTTTGCAAAA ATTGG TTTTGCAACAGGA GTTAGTCCAGTTGAT nagB 154353 - 155120 + | glucosamine-6-phosphate deaminase TERM 171 155324 - 155308 - g 74 -8.1 -3.45027 | opp_overlap 155308, overlap 155306 ATGGGGGATCAAATA TTTCTGA AAT TCAGAAA TTTATAGGATTAGTT TERM 172 155308 - 155324 + G 78 -8.1 -3.93638 | opp_overlap 155306 155308 ATGGGGGATCAAATA TTTCTGA AAT TCAGAAA TTTATAGGATTAGTT MCAP_0129 155124 - 156806 + | PTS system, N-acetylglucosamine-specific IIBC component, putative TERM 173 156840 - 156821 - f 79 -9.4 -3.33509 | opp_overlap 156821 GTTTAAATAATTTAA GTTCAGAT TATT ATCTGAAC TTTTTATTTTATTAA TERM 174 156821 - 156840 + F 100 -9.4 -5.62288 | opp_overlap 156821 GTTTAAATAATTTAA GTTCAGAT TATT ATCTGAAC TTTTTATTTTATTAA TERM 175 157237 - 157216 - g 79 -8.1 -4.17296 | overlap 157219 TTTGATAGATACAAA CAACTAGCT GAAC AACTAGTTG ATCAAAATAAAGCAT TERM 176 158260 - 158237 - g 70 -7.6 -3.39165 | overlap 158228 158235 AAATAATTAAAGACA CTTCAACATT AGCA AATGTTAAAG GAAAAGATTTGTTTA gltX 156937 - 158388 + | glutamyl-tRNA synthetase TERM 177 159014 - 159001 - f 73 -3.9 -5.40072 | overlap 158983 TCTTTCCTAAAAAAA CAATT ATGC AATTG AATCATATTTATTAG MCAP_0132 159630 - 160067 + | DNA-directed RNA polymerase, delta subunit, putative TERM 178 160073 - 160098 + F 74 -3.4 -5.54338 | TAATCAATAATTAAA GGTTGTAAAA CTAAGT TTTTATGACC TTTTTATTTTAATTA TERM 179 160822 - 160840 + G 83 -7.6 -4.55625 | opp_overlap 160822 160821 160826, overlap 160826 CTCACCAAAAGATAT TAAAGAAA AAA TTTCTTTA TTTTGTAATGTTCCT pyrG 160160 - 161758 + | CTP synthetase TERM 180 161798 - 161780 - f 91 -10.4 -3.95772 | opp_overlap 161780, overlap 161774 AATAATAAAGTTAAA CTCACAAT TAA ATTGTGAG TTTTTATTTTAAATA TERM 181 161780 - 161798 + F 100 -10.4 -5.48213 | opp_overlap 161780 161774 AATAATAAAGTTAAA CTCACAAT TAA ATTGTGAG TTTTTATTTTAAATA MCAP_0134 162260 - 163033 + | hypothetical protein TERM 182 163068 - 163058 - g 70 -2.6 -5.55664 | opp_overlap 163058 CGACTATGAAAAAAA TAAT TTT ATTA TTATCAACTAACATA MCAP_0135 163048 - 164022 + | hypothetical protein TERM 183 164029 - 164044 + F 90 -7.6 -5.186 | opp_overlap 164025 AAAAAATAATTTCAA CCTAGT AAAT ACTAGG TTTTTCTATGTTTTA TERM 184 164318 - 164292 - g 78 -8.2 -3.84772 | overlap 164288 AATGAACAAAAGCAA TTTTAGAAGC AGCTGAA GCTTCTAAAA CACCAGTTATTATAG fba 164174 - 165067 + | fructose-1,6-bisphosphate aldolase, class II TERM 185 165098 - 165132 + T 100 -8.2 -5.48163 | opp_overlap 165098 165118 AAATATTTGAAAGAA GACATAAAGAATTT TAAAAAT AAATTTTTTATGTC TTTTTTACTTTATTT TERM 186 165256 - 165239 - T 100 -9.9 -5.02074 | opp_overlap 165241 CTACTTTTTAAAAAA GACTCAC TTTT GTGAGTC AATTGAAATTTATTT MCAP_0137 166778 - 165285 - | hypothetical protein TERM 187 165661 - 165683 + g 86 -4.2 -5.95946 | opp_overlap 165641 ACAATTATTCTTACT GTTCATAAAT ATC ATTTAGGAGC TTTTTTTATTATTCA TERM 188 166800 - 166825 + H 75 -9.2 -2.9953 | opp_overlap 166785 166822, overlap 166785 166786 166822 CTTACCTTTCTGTAG GTAGGTAATT AATTAA AATTACCTAC TATAATTGTAGTTGA MCAP_0138 166983 - 168434 + | hypothetical protein TERM 189 169090 - 169080 - g 75 -4 -5.52986 | opp_overlap 169080 169085, overlap 169085 ACTTTATTAAAAAAA CAAT CTA ATTG TGAATTATTTAAAAA MCAP_0139 168519 - 169235 + | glycerophosphoryl diester phosphodiesterase family protein TERM 190 169260 - 169248 - f 76 -3.5 -5.89947 | opp_overlap 169248 169255 TAAATCTAAAAAAAA TAATA GTT TATTA TTAAATAATAATTAT rpmE 169372 - 169650 + | 50S ribosomal protein L31 TERM 191 169654 - 169670 + F 100 -8.7 -5.43553 | opp_overlap 169653 GAAAACAAATAATTT GAGGTCT TAA GGACCTC TTTTATTTTTTAAAT MCAP_0141 169725 - 171653 + | hypothetical protein MCAP_0142 171663 - 172613 + | DHH phosphoesterase family protein, putative tdk 172616 - 173245 + | thymidine kinase TERM 192 173869 - 173849 - g 78 -8.3 -3.87062 | opp_overlap 173849, overlap 173844 173843 AAGGAAGAATTCAAA CTTCAACAG CAA CTGTTGCAG TTTTACCTGAAATGA TERM 193 173849 - 173869 + G 79 -8.3 -4.1899 | opp_overlap 173849 173844 173843 AAGGAAGAATTCAAA CTTCAACAG CAA CTGTTGCAG TTTTACCTGAAATGA prfA 173248 - 174339 + | peptide chain release factor 1 TERM 194 174379 - 174401 + G 79 -8.5 -4.13711 | opp_overlap 174379, overlap 174397 ACTACAACAAGCTAA CATCAGTCT GAATA AGGCTGATG TTTATCATATTTTAG TERM 195 174956 - 174978 + G 77 -6.4 -4.60808 | overlap 174957 TATGAGCCAAGTATT GCTTTATTTG CAC CAAATAAAGG TTTGTATTTTTATGA TERM 196 174957 - 174977 + G 87 -9.9 -3.34858 | overlap 174956 ATGAGCCAAGTATTG CTTTATTTG CAC CAAATAAAG GTTTGTATTTTTATG MCAP_0145 174332 - 175144 + | HemK family modification methylase MCAP_0146 175190 - 176662 + | hypothetical protein TERM 197 176661 - 176649 - f 83 -3.5 -6.20267 | opp_overlap 176649 TTAAAAATAAAAAAA TATTT AGA AAATA GGTTTTATTATGTTA MCAP_0147 176671 - 177171 + | hypothetical protein TERM 198 177170 - 177160 - f 73 -4 -5.44721 | opp_overlap 177147 AGTATTTTAAAAAAA TATC TTA GATA AAGACAAATTAGTAA TERM 199 177459 - 177498 + G 76 -8.2 -3.67989 | GTGTTTTAGCTGTTA GTGGTTTTATTAAAAGTA AGGC TATTATTAATAAAACTAC TTTAAATACAATTTT MCAP_0148 177239 - 178192 + | hypothetical protein TERM 200 178253 - 178276 + F 100 -6.2 -6.22802 | gap 1, opp_overlap 178248 178253 CTTTAATTAATTAAA TAGGC-TTATT TAA AATAAAGCCTA TTTTTTTTTATAAAA TERM 201 178455 - 178439 - g 73 -3.1 -5.46657 | opp_overlap 178427 178444 178448, overlap 178441 178444 GACTTTAATAAAAAA TCTAATA TTT TATTAAA TAACTTTATTATTAT MCAP_0149 178316 - 179023 + | hypothetical protein MCAP_0150 179023 - 180552 + | cardiolipin synthetase, putative TERM 202 180550 - 180574 + F 74 -2.3 -5.97979 | ATTCAACCTTTACTA TAATTTTTTTA GTT TATAAAGATTA TTTTTTTATTCTTAT rpsL 180676 - 181095 + | 30S ribosomal protein S12 rpsG 181185 - 181652 + | 30S ribosomal protein S7 fusA 181679 - 183748 + | elongation factor G TERM 203 183814 - 183799 - f 86 -8.2 -4.9181 | overlap 183800 ATATAATAGTAAAAA CGCCCC AAAA GGGGCA GACAAAATAGTAGAA TERM 204 183813 - 183800 - f 80 -9.5 -3.53459 | overlap 183799 TATAATAGTAAAAAC GCCCC AAAA GGGGC AGACAAAATAGTAGA tuf 183880 - 185067 + | elongation factor Tu TERM 205 185091 - 185110 + F 100 -9.4 -5.75538 | opp_overlap 185091 AATAATTTATAAAAA GAACTAGT ATAT ACTAGTTC TTTTTATTTTTTAAA TERM 206 185110 - 185091 - f 95 -9.4 -4.94222 | opp_overlap 185091 AATAATTTATAAAAA GAACTAGT ATAT ACTAGTTC TTTTTATTTTTTAAA MCAP_0155 185190 - 187031 + | PTS system, IIBC component, putative TERM 207 187026 - 187016 - g 73 -3.2 -5.56573 | AGAAAGAAATAAAAA TGGC AAA ACCA AATAATATTACTAGA MCAP_0156 187015 - 189282 + | isoglycosyl hydrolase family protein TERM 208 189832 - 189802 - g 70 -3.4 -5.31456 | GTAAGTTATAAAAAA GATAGTAAACCA AACGAAG TAGTTTACAATC TTATCACAAATGAAG pepA1 189469 - 190824 + | cytosol aminopeptidase TERM 209 190854 - 190831 - T 86 -8.4 -4.65969 | opp_overlap 190851, overlap 190851 AATAAATAATGAAAA TAACTATTTT GCAT AAAATAGTTA ACAATAACTCACTTC TERM 210 190913 - 190897 - T 83 -6.6 -4.93365 | opp_overlap 190897, overlap 190891 TTTGACAATTAAAAA GGATCT TTAAT AGATCC TTTTTTTTAAACAAT TERM 211 190897 - 190913 + T 100 -6.6 -5.75945 | opp_overlap 190897 190891 TTTGACAATTAAAAA GGATCT TTAAT AGATCC TTTTTTTTAAACAAT TERM 212 192358 - 192317 - T 93 -6.9 -5.36314 | opp_overlap 192326 192331, overlap 192320 192323 192331 TAAAATATTAAAAAA TAGTAATAAAAAAATGAGA TTAT TCTCATTTTATTACTAATA TTAAAATTTTAAAAA TERM 213 192355 - 192320 - T 73 -8.6 -3.14212 | opp_overlap 192326 192331, overlap 192317 192323 192331 AATATTAAAAAATAG TAATAAAAAAATGAGA TTAT TCTCATTTTATTACTA ATATTAAAATTTTAA TERM 214 192352 - 192323 - T 74 -8.1 -3.67898 | opp_overlap 192326 192331, overlap 192320 192317 192331 ATTAAAAAATAGTAA TAAAAAAATGAGA TTAT TCTCATTTTATTA CTAATATTAAAATTT TERM 215 192331 - 192344 + T 70 -5.3 -4.74215 | opp_overlap 192323 192320 192317 192331, overlap 192326 ATAGTAATAAAAAAA TGAGA TTAT TCTCA TTTTATTACTAATAT TERM 216 192344 - 192331 - T 84 -5.3 -5.85737 | opp_overlap 192331 192326, overlap 192323 192320 192317 ATAGTAATAAAAAAA TGAGA TTAT TCTCA TTTTATTACTAATAT alaS 195080 - 192390 - | alanyl-tRNA synthetase TERM 217 192794 - 192807 + g 73 -2.5 -5.72622 | GTATTAAATTATCTT TATTA ATAG TAATA TTTTTTATTTCTAAA MCAP_0160 195643 - 195149 - | hypothetical protein TERM 218 195685 - 195706 + H 74 -3.2 -5.9003 | opp_overlap 195685, overlap 195685 ATATAACAAATCAAA TAAAAAAA TAGAGT TTTTTTTA TTTTTTTATTAATTT TERM 219 195796 - 195827 + H 78 -6.2 -4.91573 | gap 1, opp_overlap 195801 195804, overlap 195801 AGCACTATATTTCTA GTAAA-TAAGTTAAT TTG ATTAACTTATTTTGC TTTTTAATATATTTT TERM 220 195821 - 195801 - H 77 -8.5 -3.74251 | opp_overlap 195796 195801, overlap 195804 TATATTTCTAGTAAA TAAGTTAAT TTG ATTAACTTA TTTTGCTTTTTAATA TERM 221 195801 - 195821 + H 90 -8.5 -4.80167 | opp_overlap 195801 195804, overlap 195796 TATATTTCTAGTAAA TAAGTTAAT TTG ATTAACTTA TTTTGCTTTTTAATA MCAP_0161 195862 - 197106 + | oligopeptide ABC transporter, permease protein, putative TERM 222 197213 - 197238 + G 70 -7.8 -3.45366 | ATGGTTTAGATATTT TTCAAATAGA TCACTC TCTATTTGAA TTAGTTGGTTCACAA MCAP_0162 197122 - 198132 + | oligopeptide ABC transporter, permease protein, putative MCAP_0163 198146 - 199846 + | oligopeptide ABC transporter, ATP-binding protein MCAP_0164 199848 - 201725 + | oligopeptide ABC transporter, ATP-binding protein MCAP_0165 201742 - 204849 + | oligopeptide ABC transporter, oligopeptide-binding protein, putative TERM 223 204860 - 204877 + F 100 -7.1 -5.8187 | opp_overlap 204860 AATAATTTTTAAAAA CAATACT TTAA AGTATTG TTTTTTTATTAAATA TERM 224 204877 - 204860 - f 79 -7.1 -4.64144 | opp_overlap 204860 AATAATTTTTAAAAA CAATACT TTAA AGTATTG TTTTTTTATTAAATA MCAP_0166 204948 - 205049 + | truncated membrane protein TERM 225 205185 - 205215 + F 95 -8.5 -5.22943 | gap 1, opp_overlap 205185 205195 ACATATGTTTATAAC CCCACTTAAAGTTA ACAC TAACTTT-GGTGGG TTTTTTAAGTTTAAT TERM 226 206136 - 206118 - g 73 -3.2 -5.56112 | ATAAAAACGAAAAAA TGTGAATT TTG AATTTACA AAACCAACAATATAA TERM 227 206675 - 206661 - g 71 -5.8 -4.7261 | ATTTATCAAAAGAAA TAGAAA ATG TTTCTA ATACATCTGAAAAAA MCAP_0167 205361 - 206965 + | hypothetical protein TERM 228 207053 - 207063 + F 81 -4 -5.91981 | GTCTTTTTGCTATAC TCAA CTT TTGA TTTTTTTTAGATTTT TERM 229 207498 - 207518 + F 75 -2.6 -6.08342 | opp_overlap 207498 TTGTCTTACTTATAA CAACCA CTTAAAACC TGGTTG TTTTTTTGTTTATTG TERM 230 208300 - 208289 - g 86 -4.4 -5.88565 | opp_overlap 208289 CTTATAACAAAAAAA CAGA TTTG TCTG TTGGATTATATTTAT MCAP_0168 207895 - 209073 + | hypothetical protein TERM 231 209243 - 209227 - g 75 -6.7 -4.48741 | opp_overlap 209230 CAAGTTAGCAGAAAA TAACTAT CAC ATAGTTA ATGGAAATGGTAAAG MCAP_0169 209054 - 209689 + | hypothetical protein TERM 232 209773 - 209746 - f 100 -8.6 -6.08342 | TAACAAATAAAAAAA GTATATCAAGTT ATAC ACCTTGATATAC CTATAGAAAGGATAT MCAP_0170 209791 - 210543 + | hypothetical protein TERM 233 210574 - 210545 - f 100 -10.9 -4.70117 | AATTTAACAAATAAA GGTATATCAAGTT ATAC ACCTTGATATACC TAGAAAGGAAAATAA TERM 234 210996 - 211022 + G 78 -9.6 -2.97707 | opp_overlap 211009 211020, overlap 211000 TACAACTGTTTACCT TTGTTATTGCAA ATA TTGCATTAACAA TAATTATTGGTGTAG MCAP_0171 210593 - 211243 + | hypothetical protein TERM 235 211262 - 211286 + F 83 -6.5 -5.09895 | opp_overlap 211262 GTAAACACAAACAAG GCATATAGGTT TTT ATCTTATATGC TTTTTTAAATAAGTA TERM 236 211326 - 211299 - f 88 -10 -3.90744 | opp_overlap 211298 211319 TGCTTTTTTAAATAA GTATATCTAGGT ATAC ACCTTGATATAC CTTACATCACTTAAT MCAP_0172 211364 - 212194 + | putative lipoprotein MCAP_0173 212404 - 212691 + | hypothetical protein TERM 237 212722 - 212693 - f 100 -10.9 -4.70117 | AATTTAACAAATAAA GGTATATCAAGTT ATAC ACCTTGATATACC TATAGAAAGGATAAA TERM 238 213747 - 213718 - f 100 -10.9 -4.70117 | AATTTAACAAATAAA GGTATATCAAGTT ATAC ACCTTGATATACC TATAGAAGGGATTTA MCAP_0175 213766 - 214179 + | hypothetical protein MCAP_0176 214405 - 214289 - | hypothetical protein MCAP_0177 214527 - 214916 + | hypothetical protein TERM 239 215237 - 215247 + G 75 -5.4 -4.93079 | overlap 215241 GAAATACTATACCTG TTCC TAA GGAA TTTCTTTATTTTCTT TERM 240 215514 - 215556 + G 73 -8 -3.73953 | opp_overlap 215508 ACAATTATATTATTT TGGTTTTAGGAATAGTTATT TAA AATCAATATTCCTAAAACAA TTTAATGAAAATAGT MCAP_0178 215059 - 216234 + | hypothetical protein TERM 241 216291 - 216256 - f 87 -7 -5.18643 | TCAATCAAAAGAAAA TAAGGTATATCTAGGT ATAC ACCTTTATATACCCTA CATCACTATATAGAA TERM 242 216926 - 216940 + G 75 -5.8 -5.0538 | opp_overlap 216925 AACTTGAATATAATT CTAAAT TTT ATTTAG TTTTTTCAAGTAAAG MCAP_0179 216319 - 219186 + | membrane bound ATPase, putative TERM 243 219206 - 219192 - f 74 -8.6 -3.20361 | opp_overlap 219192 AAAAGTTTAATTTAA GAACCT TTA AGGTTC TTTTTTTACTAACAA TERM 244 219192 - 219206 + F 100 -8.6 -5.52384 | opp_overlap 219192 AAAAGTTTAATTTAA GAACCT TTA AGGTTC TTTTTTTACTAACAA TERM 245 219226 - 219239 + F 71 -8.1 -3.35996 | opp_overlap 219226, overlap 219225 TTTACTAACAATTTA GTCGG ATTT CCGAC CTTTTGTCTGTGAAG TERM 246 219432 - 219452 + F 75 -2.6 -6.08342 | opp_overlap 219432 TTGTCTTACTTATAA CAACCA CTTAAAACC TGGTTG TTTTTTTGTTTATTG MCAP_0180 219507 - 219827 + | hypothetical protein MCAP_0181 219869 - 220444 + | hypothetical protein MCAP_0182 220472 - 221119 + | adenine-specific DNA methylase, putative MCAP_0183 221144 - 221575 + | hypothetical protein TERM 247 221607 - 221580 - f 100 -10 -5.07107 | opp_overlap 221579 TAAACTCTTAAAAAA GTATATCTAGGT ATAC ACCTTGATATAC CTTACATAACTTAAT MCAP_0184 221642 - 222379 + | hypothetical protein MCAP_0185 222379 - 222585 + | hypothetical protein TERM 248 222858 - 222804 - f 71 -8.3 -3.27601 | gap 1, opp_overlap 222816 222818, overlap 222807 222810 222827 GAAATCATAACTGAA TAACTATGTTTA-GGTATACCAAAGT ATAT ACCTTGATATACCTTAAACAAAACTA GAAAAAAGTTTAATT TERM 249 222855 - 222807 - f 72 -7.8 -3.76168 | gap 1, opp_overlap 222816 222818, overlap 222804 222810 222827 ATCATAACTGAATAA CTATGTTTA-GGTATACCAAAGT ATAT ACCTTGATATACCTTAAACAAAA CTAGAAAAAAGTTTA TERM 250 222852 - 222810 - f 86 -11.7 -2.96731 | gap 1, opp_overlap 222816 222818, overlap 222807 222804 222827 ATAACTGAATAACTA TGTTTA-GGTATACCAAAGT ATAT ACCTTGATATACCTTAAACA AAACTAGAAAAAAGT TERM 251 222910 - 222889 - f 78 -7.5 -4.26953 | overlap 222901 AATTAATTTAATAAA TAAAAAACA AACC TGTTTTTTA TAAAACTGAAAAGAG MCAP_0186 222935 - 225676 + | hypothetical protein TERM 252 225688 - 225708 + F 100 -9.1 -6.47228 | opp_overlap 225688 ATAATATTAATTGAA CACCTAATT AAA AGTTAGGTG TTTTTTTTTTAATTA TERM 253 226353 - 226329 - g 77 -8.8 -3.44848 | opp_overlap 226331, overlap 226327 GTTTTTCACCAAATA TATCAAATTC AAAAA GAATTTGATA TTCCAATAAATAAAA TERM 254 226530 - 226518 - g 77 -4.9 -5.38839 | TATAGAAAAATAAAA CAAAA ACT TTTTG AATTATATAACCTAG MCAP_0187 226062 - 227186 + | IS3 family transposase TERM 255 227294 - 227308 + F 71 -3.6 -5.34208 | AAATAAGAGCATAGT TTTTGT TTT GCAAAA TTTTTAATTTTTTTT TERM 256 228393 - 228374 - f 73 -6.6 -4.24562 | opp_overlap 228374, overlap 228368 228383 AAAAAATTATATAAA TGTTATTA ACAC TAATAACA TTATTGCAGAGCTAA TERM 257 228698 - 228678 - f 73 -4 -5.4588 | opp_overlap 228680, overlap 228680 TAAAACTACAAAAAA GATACACC ATAAA GGTGTATT TTTAAGCAATAGAAA TERM 258 228696 - 228680 - f 73 -6.6 -4.32919 | opp_overlap 228680, overlap 228678 AAACTACAAAAAAGA TACACC ATAAA GGTGTA TTTTTAAGCAATAGA TERM 259 228680 - 228696 + F 77 -6.6 -4.58395 | opp_overlap 228680 228678 AAACTACAAAAAAGA TACACC ATAAA GGTGTA TTTTTAAGCAATAGA MCAP_0189 228765 - 229850 + | multiple sugar ABC transporter, ATP-binding protein TERM 260 229912 - 229888 - f 74 -3.6 -5.61596 | opp_overlap 229890, overlap 229890 ACCTTTATAAAAAAA CAGACACAAT TTAGT AATGTGTCTA TTTTTATTGATAATA TERM 261 230841 - 230818 - g 74 -6.2 -4.72007 | TGCTATTAAAATAAA TAATCAAATT AATC AATTTGACTA TGAACAATTAAAAGA MCAP_0190 229949 - 232246 + | glycosy hydrolase family protein MCAP_0191 232248 - 233852 + | glycosy hydrolase family protein TERM 262 234439 - 234399 - g 84 -9.3 -3.79021 | opp_overlap 234411, overlap 234400 GAAAATTCTATTAAA CCTTTTAAACTAACTTCTA TAA TAGAAGCTAAATTAAAAGA TCAAATGACTAGAAA TERM 263 234438 - 234400 - g 82 -10.6 -2.86689 | opp_overlap 234411, overlap 234399 AAAATTCTATTAAAC CTTTTAAACTAACTTCTA TAA TAGAAGCTAAATTAAAAG ATCAAATGACTAGAA MCAP_0192 233874 - 234593 + | GntR family transcriptional regulator TERM 264 234591 - 234628 + T 93 -11 -3.85864 | gap 1, opp_overlap 234600, overlap 234600 234623 TCAATTAAATATTTG TAA-AAAAAATCTCGGA AATAA TCCGAGATTTTTTATTA TTCTTCTAATAATGA TERM 265 234618 - 234600 - T 100 -8.9 -5.76949 | opp_overlap 234591 234600 TATTTGTAAAAAAAA TCTCGGA AATAA TCCGAGA TTTTTTATTATTCTT TERM 266 234600 - 234618 + T 100 -8.9 -5.70522 | opp_overlap 234600, overlap 234591 TATTTGTAAAAAAAA TCTCGGA AATAA TCCGAGA TTTTTTATTATTCTT MCAP_0193 236419 - 234626 - | oligoendopeptidase F MCAP_0194 237102 - 236419 - | hypothetical protein pepA2 238473 - 237118 - | cytosol aminopeptidase MCAP_0196 239884 - 238589 - | hypothetical protein TERM 267 239277 - 239291 + g 81 -5.8 -5.42605 | opp_overlap 239276 239277 TATGTTTCATTAAAT GTATTT TTT AAATAC TTTTGTTTTTCTTCG MCAP_0197 240127 - 240747 + | chromate transporter MCAP_0198 240747 - 241424 + | chromate transporter TERM 268 241582 - 241597 + T 78 -4 -5.90231 | opp_overlap 241556 241582 241577 AAAGATTAATTAAAA CAACTT TTAG GAGTTG TTTTTTTCTATTTAT TERM 269 242915 - 242880 - T 78 -4.2 -5.77734 | gap 1, opp_overlap 242891, overlap 242884 242891 AAATAAAAAGAAAAA CATATAAAAAACCTGGA AAT CCCAGGTTTTTT-TCTA TTTATTAGCAAGTAA TERM 270 242912 - 242884 - T 84 -9.7 -3.7764 | opp_overlap 242891, overlap 242880 242891 AAAAAGAAAAACATA TAAAAAACCTGGA AAT CCCAGGTTTTTTT CTATTTATTAGCAAG TERM 271 242891 - 242905 + T 100 -7.1 -5.90231 | opp_overlap 242884 242880 242891 AAAACATATAAAAAA CCTGG AAATC CCAGG TTTTTTTCTATTTAT TERM 272 242905 - 242891 - T 100 -7.8 -5.53079 | opp_overlap 242891, overlap 242884 242880 AAAACATATAAAAAA CCTGGA AAT CCCAGG TTTTTTTCTATTTAT MCAP_0200 246038 - 242913 - | spermidine/putrescine ABC transporter, permease protein and spermidine/putrescine-binding protein TERM 273 246017 - 246029 + g 70 -2.7 -5.52347 | opp_overlap 246018, overlap 246018 CAAAAGCAAAATAAC TTCTT TTT AAGAG TTTTTTCATTTTCTT MCAP_0201 247015 - 246023 - | spermidine/putrescine ABC transporter, permease protein TERM 274 246135 - 246121 - G 73 -6.4 -4.35581 | CTAAAATAGCTAAAA CTACTG AAA CAGCAG CACCATATCCAAAGT TERM 275 246248 - 246229 - G 73 -7.2 -4.05027 | overlap 246233 TATAATGAACAACAA TCAAGCTA GTAG CAGCTTGA ACTAGCACTAAACTA MCAP_0202 248070 - 247015 - | spermidine/putrescine ABC transporter, ATP-binding protein TERM 276 248134 - 248119 - R 84 -7.6 -4.90079 | opp_overlap 248119 ATTTTAACAACAAAA GAAGTC ATTA GACTTC TACTTAAGGGAGAGA TERM 277 248426 - 248411 - R 84 -5.4 -5.48825 | opp_overlap 248411 TACTAGTTAAAAAAA TCTCCC CTAA GAGAGA TCTAATTATTTATTT rplT 248791 - 248432 - | 50S ribosomal protein L20 rpmI 249001 - 248810 - | 50S ribosomal protein L35 infC 249572 - 249027 - | translation initiation factor IF-3 def 250363 - 249761 - | polypeptide deformylase TERM 278 250803 - 250779 - g 70 -5.1 -4.88228 | opp_overlap 250779, overlap 250772 ATTCAACATCAAAAA GTAGATCTA GTATATT TAGATCCAC CTTTTAAACAAATTG MCAP_0207 250437 - 250994 + | methyltransferase, putative gmk 250997 - 251890 + | guanylate kinase MCAP_0209 251853 - 253139 + | rRNA methyltransferase RsmB (sun protein), putative TERM 279 253166 - 253131 - T 78 -4.2 -5.72207 | gap 1, opp_overlap 253131 253136, overlap 253134 253136 TGTAAATTAAAAAAA CAACACTAGAAACTA GTATTTA TCGTTTCT-GTGTTG TTTTTGTTCTGCTTG TERM 280 253131 - 253166 + T 70 -4.2 -5.24416 | gap 1, opp_overlap 253131 253134 253136, overlap 253136 TGTAAATTAAAAAAA CAACACTAGAAACTA GTATTTA TCGTTTCT-GTGTTG TTTTTGTTCTGCTTG TERM 281 253148 - 253134 - T 70 -5 -4.90519 | opp_overlap 253131 253136, overlap 253131 253136 AAATTAAAAAAACAA CACTAG AAA CTAGTA TTTATCGTTTCTGTG typA 254972 - 253143 - | GTP-binding protein TypA/BipA TERM 282 253807 - 253832 + g 73 -7.7 -3.79995 | TGAAAAATTACTTCT GGTTTTGAAAT TGCT AATTCAAAACC TTCTCTTCTCATTGC TERM 283 255167 - 255150 - H 87 -7.1 -5.28561 | opp_overlap 255150, overlap 255164 AATATATAAGAAAAA TAGAACT TAAA AGTTCTA TTTTAAAAATAAATT TERM 284 255150 - 255167 + H 74 -7.1 -4.1196 | opp_overlap 255150 255164 AATATATAAGAAAAA TAGAACT TAAA AGTTCTA TTTTAAAAATAAATT MCAP_0211 255250 - 256059 + | putative lipoprotein MCAP_0212 256070 - 256867 + | putative lipoprotein eno 256990 - 258345 + | enolase MCAP_0214 258411 - 259232 + | PAP2 superfamily domain-containing protein MCAP_0215 259234 - 259665 + | holliday junction resolvase, putative hpt1 259671 - 260243 + | hypoxanthine phosphoribosyltransferase TERM 285 260246 - 260272 + T 95 -11 -4.45664 | opp_overlap 260251, overlap 260251 TTGAAAGTGATAATA AAAAAGCTCATC AAT GATGAGCTTTTC TTTTGGTTAAGTTAG TERM 286 260251 - 260267 + T 100 -10.9 -5.18643 | opp_overlap 260251, overlap 260246 AGTGATAATAAAAAA GCTCATC AAT GATGAGC TTTTCTTTTGGTTAA TERM 287 260267 - 260251 - T 100 -10.9 -5.56673 | opp_overlap 260251 260246 AGTGATAATAAAAAA GCTCATC AAT GATGAGC TTTTCTTTTGGTTAA MCAP_0217 261069 - 260290 - | glycerol uptake facilitator protein TERM 288 260528 - 260508 - G 76 -8.3 -3.71527 | overlap 260504 ATACTAATAAACCAA CAGCTAATG GAC CAATAGCTG TAAATGCTGAAGATT glpK 262622 - 261105 - | glycerol kinase TERM 289 262155 - 262170 + g 72 -7.6 -3.58801 | TAGTTTTCCTTCTTT TGCTAG TTGT CTAGCA TTTGGAACATTATCT TERM 290 262210 - 262244 + g 71 -6.6 -4.18401 | opp_overlap 262215 262218, overlap 262215 TTTACTTTAGTTCCT GAAAAGTATGGGTTAA TTA TTAATCCAGACTTTTG TTTTACCATCTCTAA TERM 291 262215 - 262239 + g 80 -6.5 -5.09259 | opp_overlap 262215 262218, overlap 262210 TTTAGTTCCTGAAAA GTATGGGTTAA TTA TTAATCCAGAC TTTTGTTTTACCATC TERM 292 262650 - 262665 + r 74 -6.2 -4.50661 | overlap 262639 TATACTATTTTCATG GAAGAA TAGC TTCTTC TTTTGGTTGTCAATT MCAP_0219 263802 - 262639 - | glycerol-3-phosphate dehydrogenase, putative TERM 293 264045 - 264070 + H 100 -9.9 -5.60689 | opp_overlap 264045 CTAAATGATTTAAAA GTATACCTTTG CAAA TAAAGGTATAC TTTTTTGTTATATAA TERM 294 264070 - 264045 - H 84 -9.2 -4.26079 | opp_overlap 264045 CTAAATGATTTAAAA GTATACCTTT GCAAAT AAAGGTATAC TTTTTTGTTATATAA pfkA 264143 - 265123 + | phosphofructokinase pyk 265192 - 266628 + | pyruvate kinase TERM 295 266645 - 266665 + F 73 -4.2 -5.32699 | opp_overlap 266635 266642 266645 266662, overlap 266662 AAAACTAAAAAATAT TTTATAAA ATAAA TTTATAAA TTTTTTAATATTTAA TERM 296 266878 - 266857 - f 82 -10.2 -3.54424 | opp_overlap 266857 TGGTACCGCGTTAAA TCGCTCCT AAATTA AGGAGCGA TTTTTTTTATAAGGA TERM 297 266857 - 266878 + F 100 -10.2 -5.93809 | opp_overlap 266857 TGGTACCGCGTTAAA TCGCTCCT AAATTA AGGAGCGA TTTTTTTTATAAGGA TERM 298 267525 - 267513 - g 72 -4.9 -5.05228 | ATTAAATGACAAAAA TAACA TTA TGTTA CAAAGAGTTCATGGA thrS 266899 - 268818 + | threonyl-tRNA synthetase TERM 299 268836 - 268855 + F 100 -7.2 -5.79595 | opp_overlap 268836 TAATATTAGTTATAA CTTGCGAT TTTT ATTGCAAG TTTTTTATTTTAAAA MCAP_0223 269448 - 270812 + | NADH oxidase MCAP_0224 270824 - 271828 + | lipoate-protein ligase TERM 300 272355 - 272329 - g 70 -3.7 -5.1634 | ATAAATATAGAAAAA CAGGAGGAGTT GTTGT AACTACTACTG GAGATGGTGGATCTA pdhA 271863 - 272975 + | pyruvate dehydrogenase complex, EI component, alpha subunit TERM 301 273856 - 273839 - g 74 -6.3 -4.67943 | TTTGAATACATAAAA GCACCTT TATC AAGATGC ACAGGTTATGATGTT pdhB 272975 - 273964 + | pyruvate dehydrogenase complex, E1 component, beta subunit pdhC 273993 - 275309 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 302 275578 - 275598 + G 83 -11.3 -2.71144 | GTTCAACTTCTACAG CTTCAACTT CAA AAGTTGAAG TAGTTGAAGAAAATG pdhD 275328 - 277217 + | dihydrolipoamide dehydrogenase pta 277239 - 278207 + | phosphate acetyltransferase TERM 303 278630 - 278614 - g 70 -3.7 -5.13521 | AAAGCAGTTAAAAAA CTAATGC CAA ACACTAG TATGATAGCTTGTTT ackA 278221 - 279402 + | acetate kinase TERM 304 279416 - 279448 + F 77 -9.4 -3.13403 | opp_overlap 279415 279423, overlap 279423 AAAAGATATAATAGT TAAAAAACTTAGCT TAAAT AGCTAAGTTTTTAA TGTTAATAAAAGAAA TERM 305 279441 - 279423 - f 90 -7.5 -5.17054 | opp_overlap 279416 279423, overlap 279415 ATAATAGTTAAAAAA CTTAGCT TAAAT AGCTAAG TTTTTAATGTTAATA TERM 306 279423 - 279441 + F 84 -7.5 -4.89233 | opp_overlap 279423 279415, overlap 279416 ATAATAGTTAAAAAA CTTAGCT TAAAT AGCTAAG TTTTTAATGTTAATA MCAP_0231 279470 - 281437 + | putative lipoprotein coaD 281447 - 281869 + | pantetheine-phosphate adenylyltransferase ptsI 281962 - 283683 + | phosphoenolpyruvate-protein phosphotransferase crr 283765 - 284229 + | PTS system, glucose-specific IIA component TERM 307 284510 - 284528 + F 100 -8.9 -5.64421 | opp_overlap 284510 TAATAATTGGAATAA TAGCGCT TATTT AGCGCTA TTTTTTATTTGAAAT TERM 308 284528 - 284510 - f 80 -8.9 -3.70751 | opp_overlap 284510 TAATAATTGGAATAA TAGCGCT TATTT AGCGCTA TTTTTTATTTGAAAT TERM 309 284531 - 284547 + F 76 -5.3 -5.13648 | overlap 284538 TTATTTAGCGCTATT TTTTATT TGA AATAAAA TTTTATTTATATTTG MCAP_0235 284721 - 285347 + | dihydroxyacetone kinase family protein MCAP_0236 285355 - 285744 + | hypothetical protein TERM 310 285786 - 285756 - T 70 -7.9 -3.12069 | gap 1, opp_overlap 285764 285777, overlap 285742 285740 285745 285764 CTAATTTTAAGAAAT TAAAAAAATCAAGC TATA GCTTGA-TTTTTTA CTATTAAATAATCAT TERM 311 285764 - 285779 + T 90 -7.6 -5.27779 | opp_overlap 285764 285756, overlap 285777 AAGAAATTAAAAAAA TCAAGC TATA GCTTGA TTTTTTACTATTAAA TERM 312 285779 - 285764 - T 100 -7.6 -5.77856 | opp_overlap 285764 285777, overlap 285756 AAGAAATTAAAAAAA TCAAGC TATA GCTTGA TTTTTTACTATTAAA rpsD 286427 - 285801 - | 30S ribosomal protein S4 TERM 313 285836 - 285850 + g 70 -7.2 -3.82811 | opp_overlap 285836 TGTATCATTCAACGA TTAGTG ATT CACTAA TTTCACTATTTAATT TERM 314 287927 - 287943 + G 76 -8.1 -3.76771 | overlap 287941 CAATTAGATAGTTTA TTAACTG ATT CAGTTAA TTATATTAGTATTGT MCAP_0238 286682 - 288469 + | hypothetical protein thiI 288478 - 289665 + | thiamine biosynthesis protein ThiI MCAP_0240 289797 - 291767 + | hypothetical protein TERM 315 291796 - 291781 - f 73 -9 -2.7122 | opp_overlap 291781, overlap 291780 291774 AAATAAATTTATAAG CCTCAG GAAA CTGAGG TTTTTTATTTTTTTT TERM 316 291781 - 291796 + F 100 -9 -6.17033 | opp_overlap 291781 291780 291774 AAATAAATTTATAAG CCTCAG GAAA CTGAGG TTTTTTATTTTTTTT MCAP_0241 291884 - 293554 + | hypothetical protein TERM 317 293964 - 293949 - g 70 -2.6 -5.54885 | overlap 293952 AAGACCAAGAAAAAA TCAGTT TATT AACTAA ACAAATTAAAGAAGT MCAP_0242 293564 - 295852 + | putative lipoprotein TERM 318 297765 - 297751 - g 72 -3.6 -5.42198 | overlap 297755 297762 TTTTAAAAAAGAAAA GAAACA AAT TATTTC TAATTTAAAAAATAA MCAP_0243 296087 - 298150 + | regulatory protein PfoR TERM 319 298166 - 298188 + T 100 -7.8 -6.12328 | opp_overlap 298166 TTAGTAAATAAAAAA TCAAGCAAAA TTA TATTGCTTGA TTTTTTTTATCTTCT TERM 320 298188 - 298166 - T 100 -7.8 -5.68438 | opp_overlap 298166 TTAGTAAATAAAAAA TCAAGCAAAA TTA TATTGCTTGA TTTTTTTTATCTTCT MCAP_0244 301091 - 298176 - | cation transporter E1-E2 family ATPase TERM 321 300028 - 300008 - G 71 -5.6 -4.57755 | opp_overlap 300007 300008 300011 ATTCATCAGATAAAA TAATTTGA TTGTT TCAAATTA ACTTTTTAATTGCCA TERM 322 300610 - 300629 + g 72 -7.9 -3.52341 | AGCAAACGTAAATCT GCTGGAA CATATT TTCCAGC TTCTAATATTACAAT MCAP_0245 301690 - 301100 - | GTPase EngB MCAP_0246 302244 - 301684 - | hypothetical protein TERM 323 302230 - 302220 - G 75 -4 -5.61824 | TAAAACTTAAAAAAA TACT TGC AGTA TAATCAACTTTCATT MCAP_0247 302824 - 302246 - | hypothetical protein MCAP_0248 303516 - 302827 - | hypothetical protein TERM 324 302941 - 302974 + g 76 -8.5 -3.71527 | opp_overlap 302948 TTTGTCATTAAATTT TGAATTATTATTTAG CATA TTAAATAATAGTTCA TTTGCATAATTAAAG MCAP_0249 303598 - 304293 + | hypothetical protein MCAP_0250 305016 - 304294 - | short chain dehydrogenase/reductase family oxidoreductase TERM 325 305069 - 305050 - R 100 -6.5 -5.64274 | opp_overlap 305049 305050 305063, overlap 305063 TTATTTATAAAAAAA GCTATTG AAATAA CAATAGC ATTGATTATTTAATA greA 305548 - 305075 - | transcription elongation factor GreA TERM 326 305653 - 305674 + r 75 -2.4 -5.95946 | ATTTATTTCTTAAAA TTACTAAT AATTAA GTTAGTAA TTTTTTTATTATTAA uvrC 307394 - 305640 - | excinuclease ABC, C subunit MCAP_0253 308479 - 307403 - | hypothetical protein TERM 327 307792 - 307806 + g 76 -2.2 -5.81622 | overlap 307798 TATCTGAAGTGTTGT TATTTT TAA AAGATA TTTTTTTAGTTTTAT TERM 328 308005 - 308036 + g 82 -9 -4.1399 | opp_overlap 308002 308005 TAAAAAAATAATTTA TTCAGTTTTTAAAA TCTA TTGTAAAAACTGAA TTTGTATATCAGTGA TERM 329 308036 - 308005 - G 73 -9 -2.85602 | opp_overlap 308005, overlap 308002 TAAAAAAATAATTTA TTCAGTTTTTAAAA TCTA TTGTAAAAACTGAA TTTGTATATCAGTGA TERM 330 309501 - 309486 - R 78 -6.2 -4.84246 | opp_overlap 309500, overlap 309482 309499 309500 AAAACAAGAAACAAA TGCTTT TGAA AAAGCA TTAAAACTTAATGTT TERM 331 310286 - 310266 - R 79 -4.8 -5.63504 | opp_overlap 310266 AATTTTATAAAAAAA GATAAACC ATTAG GATTTATC TCTTTTAGATTTATT MCAP_0255 312026 - 310275 - | hypothetical protein TERM 332 311033 - 311047 + g 73 -7.8 -3.69068 | overlap 311031 CATGGCGTTTTTCAA CTCCAG CAA CTGGGG TATTTGTTAAAATAA MCAP_0256 312864 - 312145 - | short chain dehydrogenase/reductase family oxidoreductase MCAP_0257 313673 - 312876 - | inorganic polyphosphate/ATP-NAD kinase, putative TERM 333 313792 - 313759 - R 79 -8.4 -3.86995 | opp_overlap 313766, overlap 313766 CTAAATTTATAACAA TTAAAAATCTCTCT TAACTT AGAGAGATTTTAAA CTAGTTATGCTTTTA TERM 334 313785 - 313766 - R 83 -6.5 -5.01845 | opp_overlap 313766, overlap 313759 TATAACAATTAAAAA TCTCTCT TAACTT AGAGAGA TTTTAAACTAGTTAT TERM 335 313766 - 313785 + r 73 -6.5 -4.17425 | opp_overlap 313766 313759 TATAACAATTAAAAA TCTCTCT TAACTT AGAGAGA TTTTAAACTAGTTAT valS 316415 - 313797 - | valyl-tRNA synthetase TERM 336 316492 - 316477 - R 86 -9 -4.52803 | opp_overlap 316491 TATAAAGTTAGAAAA TGCCTC TAGT GAGGCA AAGTGATTTATTTTG MCAP_0259 317126 - 316500 - | hypothetical protein rpe 317793 - 317116 - | ribulose-phosphate 3-epimerase rsgA 318697 - 317795 - | ribosome small subunit-dependent GTPase A TERM 337 318497 - 318512 + g 75 -4 -5.59655 | overlap 318499 AACATTTGCAATTTT TGGTCT ATCT AGACTA TTTTTTCTTGGTTTA MCAP_0262 319822 - 318707 - | serine/threonine protein kinase, putative MCAP_0263 320085 - 319822 - | hypothetical protein MCAP_0264 320581 - 320054 - | hypothetical protein TERM 338 320241 - 320266 + gr 72 -8.5 -2.9175 | overlap 320224 ATAATATGAGCATTA TTATTTGCTAT TAAA ATAGCAGATAA TGTAGTTCCCATATC MCAP_0265 322023 - 320611 - | hypothetical protein TERM 339 321114 - 321102 - G 70 -4.9 -4.77173 | opp_overlap 321102 TGGTTATAAAATAAA TATCT TTA AGATA TTTTTTATATTTTTG TERM 340 321102 - 321114 + g 84 -4.9 -5.69068 | opp_overlap 321102 TGGTTATAAAATAAA TATCT TTA AGATA TTTTTTATATTTTTG MCAP_0266 322126 - 322542 + | hypothetical protein MCAP_0267 322544 - 323107 + | metalloendopeptidase, putative TERM 341 323151 - 323135 - T 100 -8.1 -5.75599 | opp_overlap 323138 TAAAGTATAAAAAAA TGAGTTT ATA AAACTCA TTAAAATTATGCTAT MCAP_0268 324522 - 323167 - | putative lipoprotein TERM 342 324676 - 324654 - R 100 -10.8 -6.23317 | opp_overlap 324654 324665, overlap 324673 ATAAAAATAAAAAAA TAGATCTTTT TTA AAAAGATCTA TTATTGTAATAAATA TERM 343 324654 - 324676 + r 91 -10.8 -3.8512 | opp_overlap 324654 324673, overlap 324665 ATAAAAATAAAAAAA TAGATCTTTT TTA AAAAGATCTA TTATTGTAATAAATA MCAP_0269 326143 - 324791 - | putative lipoprotein TERM 344 326201 - 326224 + r 71 -7 -3.84887 | opp_overlap 326192 326207 ACACAACTAAACAGT TATATATATA TATA TATATATATA TTTAGTGAATTTTGT TERM 345 326290 - 326311 + r 82 -8.9 -4.10161 | opp_overlap 326282 326290 ATAAAAATAAAAAAA TAGATCTTT TTAA AAAGATCTA TTTTAAGAAATAATG TERM 346 326311 - 326290 - R 100 -8.9 -6.23317 | opp_overlap 326290, overlap 326282 ATAAAAATAAAAAAA TAGATCTTT TTAA AAAGATCTA TTTTAAGAAATAATG MCAP_0270 331656 - 326350 - | ABC transporter, permease protein, putative TERM 347 330693 - 330712 + g 72 -3.7 -5.27335 | TTTCAATAATGTCAT TAAAGAA ATTATC TTCTTTA TTTTTATTTAAAAAA TERM 348 330744 - 330758 + g 79 -7.2 -4.65916 | opp_overlap 330743 TCATTTTTTCAAATT CTGTTT TTA AAACAG TTTTATTAAAATGAG TERM 349 332395 - 332405 + G 70 -4 -5.10497 | opp_overlap 332395 GCAACTTTAAGTAAG TCTT CTG AAGA TTTTTTAAATGGGTT TERM 350 332662 - 332646 - g 75 -5.3 -5.06816 | opp_overlap 332636, overlap 332661 AGCCTTTAATAAAAA TATTAAT TTA ATTAATA CTAGTTTAACTAATA MCAP_0271 331924 - 335061 + | hypothetical protein TERM 351 335380 - 335367 - g 70 -3.1 -5.27923 | overlap 335368 GAACTTTATAAAAAA CCAGA AAAT TCTGA ATTATTGAAATTAGC TERM 352 335535 - 335491 - g 78 -4.5 -5.57888 | opp_overlap 335498 335502 335502, overlap 335502 ATGAAAAAAATAAAA GTTCAAGTAAATCATTTGA TGAATTT TCAAATGAGTTGTTTGAAC AATGACATAAGGCTG MCAP_0272 335085 - 335603 + | putative lipoprotein MCAP_0273 335689 - 336228 + | putative lipoprotein TERM 353 336923 - 336947 + G 87 -7.3 -5.25656 | opp_overlap 336941, overlap 336941 336943 TACAGTTTTAATTGC TTTACCATTAA AAG TAAATGGTAAA TTTTTTACTACTTTT MCAP_0274 336621 - 337358 + | hypothetical protein TERM 354 337548 - 337571 + F 81 -5.4 -5.13521 | opp_overlap 337549, overlap 337549 AAAATATAGATAAAA AGTTTAGAAT TTTT ATTCTAAACC TTTTTTACATACTTT TERM 355 337570 - 337549 - f 93 -8.9 -5.1104 | opp_overlap 337548 337549 AAATATAGATAAAAA GTTTAGAAT TTTT ATTCTAAAC CTTTTTTACATACTT TERM 356 337549 - 337570 + F 80 -8.9 -3.66486 | opp_overlap 337549, overlap 337548 AAATATAGATAAAAA GTTTAGAAT TTTT ATTCTAAAC CTTTTTTACATACTT TERM 357 337585 - 337601 + F 76 -5.3 -5.20328 | opp_overlap 337596, overlap 337572 CCTTTTTTACATACT TTAAAAA AAT TTTTTAA TTTATTTTTTTAAAA TERM 358 337902 - 337861 - f 81 -6.2 -4.94168 | opp_overlap 337861 ATACAATAAAAGAAA TAAAAAATAACAATGG TCAAAATATC CCTTTGTTATTTTTTA TTTAAGAAAAAGGTT TERM 359 338231 - 338247 + F 71 -2.3 -5.79595 | opp_overlap 338223 AACCATATCAAAAAA CGTTATT TTG GATAATG TTTTTTGTTTTACAC TERM 360 338281 - 338265 - f 72 -8 -3.48276 | opp_overlap 338265 TTTTGTTTTACACAA GCAACC ACTTA GGTTGC TTTTTTCATTTTTTC TERM 361 338265 - 338281 + F 100 -8 -5.59502 | opp_overlap 338265 TTTTGTTTTACACAA GCAACC ACTTA GGTTGC TTTTTTCATTTTTTC TERM 362 338538 - 338522 - g 75 -6.7 -4.48741 | opp_overlap 338525 CAAGTTAGCAGAAAA TAACTAT CAC ATAGTTA ATGGAAATGGTAAAG MCAP_0275 338352 - 338984 + | hypothetical protein TERM 363 339038 - 339020 - f 77 -5.4 -4.97824 | AAAATTCAAATAAAA GTTATACA CCT TATATAAC TTAAAAAGATTATTT MCAP_0276 339294 - 339815 + | hypothetical protein TERM 364 339966 - 339986 + G 72 -7.7 -3.63991 | TATTCAAATTTCCTA TTGTTGTTA AAG TAGCAACAA TTATTCACGATAATG MCAP_0277 339845 - 340249 + | plasmid replication-initiation protein MCAP_0278 340321 - 340929 + | hypothetical protein TERM 365 341645 - 341631 - g 71 -7.2 -3.88985 | opp_overlap 341631 341630 AAAATGGTCTAGAAA CAAAGT ATC ACTTTG ATTTAATTTCAGATT MCAP_0279 340973 - 341833 + | hypothetical protein MCAP_0280 342147 - 342296 + | hypothetical protein MCAP_0281 342461 - 342769 + | single-strand binding protein family MCAP_0282 342820 - 343560 + | hypothetical protein MCAP_0283 343562 - 343777 + | hypothetical protein MCAP_0284 343855 - 344736 + | hypothetical protein TERM 366 344931 - 344888 - g 71 -6.4 -4.11394 | gap 1, opp_overlap 344885 344888 344892 ACTTCATCTGCAAAA TTAATTGTTCAAGAACTAAAT AAA AATT-GTTCTTGAATAATTAA TAATTTTGAAAATTA TERM 367 344888 - 344931 + G 71 -8.6 -3.09718 | gap 1, opp_overlap 344888, overlap 344885 344892 ACTTCATCTGCAAAA TTAATTGTTCAAGAACTAAAT AAA AATT-GTTCTTGAATAATTAA TAATTTTGAAAATTA MCAP_0285 344834 - 345322 + | hypothetical protein TERM 368 345610 - 345595 - g 84 -4.8 -5.64328 | AATAAAAAAAGAAAA TTTATC AGTT GATAAA GAGAAGCAACTACTT MCAP_0286 345374 - 345943 + | hypothetical protein MCAP_0287 346021 - 346839 + | putative lipoprotein MCAP_0288 346886 - 347458 + | hypothetical protein TERM 369 347629 - 347645 + F 100 -8 -5.59502 | opp_overlap 347629 TTTTGTTCTACACAA GCAACC ACTTA GGTTGC TTTTTTCATTTTTTC TERM 370 347645 - 347629 - f 72 -8 -3.48276 | opp_overlap 347629 TTTTGTTCTACACAA GCAACC ACTTA GGTTGC TTTTTTCATTTTTTC MCAP_0289 347716 - 348396 + | hypothetical protein TERM 371 348438 - 348401 - f 76 -4.4 -5.37865 | overlap 348411 TTAATAACTAAAAAA GTATATGAAAGTATAT CAAGTT ATACACCTTGATATAC CTATAGAAAGGATAA TERM 372 348438 - 348411 - f 79 -8.6 -3.93597 | overlap 348401 AAAAAGTATATGAAA GTATATCAAGTT ATAC ACCTTGATATAC CTATAGAAAGGATAA MCAP_0290 348460 - 348876 + | hypothetical protein TERM 373 348934 - 348905 - f 100 -10.9 -4.59489 | opp_overlap 348905, overlap 348898 348923 AATTTAAAGAATAAA GGTATATCAAGGT ATAT ACCTTTATATACC TATAGAAAGGGCACA MCAP_0291 348951 - 349499 + | hypothetical protein TERM 374 349530 - 349503 - f 77 -6.4 -4.7078 | GTAATTAGTTAAAAA GTACATCAAGTT ATAT ACCTTGATATAC CTATAGAAAGGATAA MCAP_0292 349555 - 350307 + | hypothetical protein TERM 375 350338 - 350311 - f 86 -8.6 -4.7078 | opp_overlap 350311 GTAATTAGTTAAAAA GTATATCAAGTT ATAT ACCTTGATATAC CTATAGAAAGGATAA MCAP_0293 350364 - 351119 + | hypothetical protein TERM 376 351363 - 351345 - g 70 -6 -4.25053 | opp_overlap 351345, overlap 351342 TTAGAAGATAAACAA GCTCAAAA ACT TTATGAGC TAATTATATGAACTA MCAP_0294 351168 - 351779 + | hypothetical protein MCAP_0295 351830 - 352243 + | hypothetical protein MCAP_0296 352322 - 353125 + | hypothetical protein MCAP_0297 353126 - 353794 + | adenine-specific DNA methylase, putative MCAP_0298 353798 - 354178 + | hypothetical protein TERM 377 354376 - 354399 + F 82 -6.9 -4.7629 | opp_overlap 354378 354396, overlap 354396 TTAAATAGATGTATA TAGGTATAT AACTTG ATATACCTA TTTTTAGGTTAATAG TERM 378 354655 - 354671 + F 71 -2.3 -5.79595 | opp_overlap 354647 AACCATATCAAAAAA CGTTATT TTG GATAATG TTTTTTGTTTTACAC TERM 379 354705 - 354689 - f 72 -8 -3.48276 | opp_overlap 354689 TTTTGTTTTACACAA GCAACC ACTTA GGTTGC TTTTTTCATTTTTTC TERM 380 354689 - 354705 + F 100 -8 -5.59502 | opp_overlap 354689 TTTTGTTTTACACAA GCAACC ACTTA GGTTGC TTTTTTCATTTTTTC TERM 381 359097 - 359083 - g 70 -3.6 -5.25976 | overlap 359084 AATTAAAAAAATAAA CGATAT ACA ATATCA AATAACAATAACTGC MCAP_0299 354758 - 359698 + | hypothetical protein MCAP_0300 361894 - 360401 - | hypothetical protein TERM 382 362115 - 362145 + r 72 -8.6 -2.88634 | opp_overlap 362118 362125, overlap 362114 362118 362125 TTTTTTGCATTTTCA TAATAGTAAATTAT TGT ATAATTTTCTATTA ATTATTCATTGCCCT MCAP_0301 364599 - 362143 - | hypothetical protein TERM 383 362584 - 362596 + g 72 -4.9 -4.99638 | overlap 362580 GTGTGCTTCATCTAT TACTA AAA TAGTA TTTTTATCTGAATAT TERM 384 364423 - 364444 + g 70 -7.5 -3.46982 | opp_overlap 364422 AAACTTAAAAAGATT GTATAAATT AGTT AATTTATAC TCTTGTTCATCTAAA TERM 385 364619 - 364654 + r 100 -7.9 -5.80003 | overlap 364621 TAATTCCTTTCTAGG TATATCAAGGTATAT AAGTTG ATATATCTTGATATG TTTTTTATTTATTAA TERM 386 364621 - 364652 + r 81 -8.3 -4.51345 | overlap 364619 ATTCCTTTCTAGGTA TATCAAGGTATAT AAGTTG ATATATCTTGATA TGTTTTTTATTTATT MCAP_0302 365339 - 364659 - | hypothetical protein TERM 387 365426 - 365410 - R 100 -8 -5.59502 | opp_overlap 365410 GAAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTATAAAACAAAA TERM 388 365410 - 365426 + r 72 -8 -3.48276 | opp_overlap 365410 GAAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTATAAAACAAAA TERM 389 365460 - 365444 - R 71 -2.3 -5.86976 | opp_overlap 365436 GTATAAAACAAAAAA CATTATC CAA AATAACG TTTTTTGATATGGTT TERM 390 366080 - 366093 + r 73 -3.9 -5.48163 | overlap 366087 ACAAAATCATTTTTT TCTTT TTGT AAAGA TTTTTTACTTTATTT MCAP_0303 366730 - 366143 - | hypothetical protein MCAP_0304 368646 - 366730 - | E3 binding domain-containing protein TERM 391 366765 - 366779 + g 73 -2.2 -5.7827 | CTTTAGCTTTAAAAA TATTTA ATC TGAATA TTTTTTGTTTATCTT TERM 392 366899 - 366915 + g 79 -3.7 -5.71638 | opp_overlap 366899, overlap 366883 366900 TCACTAGAAAATTTA GTAAGTG ATT CACTTAA TTTTTTTAATTCTTG TERM 393 366900 - 366914 + g 71 -7.2 -4.00543 | opp_overlap 366899, overlap 366883 366899 CACTAGAAAATTTAG TAAGTG ATT CACTTA ATTTTTTTAATTCTT TERM 394 367704 - 367691 - G 78 -6.7 -4.86731 | opp_overlap 367692, overlap 367692 CCTTTTGAAACAAAA GTTGC TGAA GCAAC AATTGCTACAAGAGT TERM 395 368715 - 368699 - R 100 -8 -5.59502 | opp_overlap 368699 GAAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTGTAAAACAAAA TERM 396 368699 - 368715 + r 72 -8 -3.48276 | opp_overlap 368699 GAAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTGTAAAACAAAA TERM 397 368749 - 368733 - R 71 -2.3 -5.79595 | opp_overlap 368725 GTGTAAAACAAAAAA CATTATC CAA AATAACG TTTTTTGATATGGTT MCAP_0305 370393 - 368903 - | hypothetical protein TERM 398 369579 - 369594 + g 72 -4 -5.44721 | overlap 369577 TTTTTAATTTTCATT GTTGTT TCAT AGCAAC TTTTTTTAGGATCAT TERM 399 370483 - 370453 - R 100 -11.4 -4.59511 | opp_overlap 370434 370449 370448, overlap 370434 370432 AACATTTTGTAAAAA TGCTAAGATTAATT GTT ACTTAATCTTAGCA TTCAAGTTTATTTGA MCAP_0306 370844 - 370524 - | hypothetical protein TERM 400 370672 - 370683 + g 70 -3 -5.47218 | CAAGTTCATTTTCTT TGAT GTAC ATCA TTTTTTTGCCTAAGA TERM 401 370914 - 370898 - R 100 -8 -5.56112 | opp_overlap 370898 370897 ATAAAAATGAAAAAA GCAACC TAAGT GGTTGC CTTGTGTAAAACAAA TERM 402 370949 - 370933 - R 71 -2.3 -5.79595 | opp_overlap 370925 GTGTAAAACAAAAAA CATTATC CAA AATAACG TTTTTTGATATGGTT MCAP_0307 372405 - 371320 - | hypothetical protein TERM 403 371930 - 371942 + g 72 -6.3 -4.4634 | overlap 371922 AAACGATCTTTTCTT TTAGC AAA GCTAA TTTGTTGTTCGACTT TERM 404 372437 - 372464 + r 75 -4.2 -5.66868 | opp_overlap 372437 TCTTATTTGTATAAA GTAGATCAAGTT ATAC AACCTGATATAC TTTTTTTAATTAATT MCAP_0308 373015 - 372470 - | hypothetical protein TERM 405 373035 - 373072 + r 76 -4.4 -5.37865 | overlap 373035 AAATCCTTTCTATAG GTATATCAAGGTGTAT AACTTG ATATACTTTCATATAC TTTTTTAGTTATTAA TERM 406 373035 - 373062 + r 79 -8.6 -3.93597 | overlap 373035 AAATCCTTTCTATAG GTATATCAAGGT GTAT AACTTGATATAC TTTCATATACTTTTT MCAP_0309 374006 - 373077 - | hypothetical protein MCAP_0310 374963 - 374061 - | hypothetical protein TERM 407 374986 - 375013 + r 86 -8.6 -4.6709 | TTTTATCCTTTCTAG GTATATCAAGGT GTAT AACTTGATATAC TTTTGTATGCTTTTA MCAP_0311 375997 - 375026 - | hypothetical protein TERM 408 376020 - 376047 + r 86 -8.6 -4.6709 | TTTTATCCTTTCTAG GTATATCAAGGT GTAT AACTTGATATAC TTTTGTATGCTTTTA MCAP_0312 377175 - 376060 - | putative lipoprotein hupB 377510 - 377232 - | DNA-binding protein, HU MCAP_0314 378211 - 377579 - | hypothetical protein TERM 409 378282 - 378298 + H 72 -8 -3.48276 | opp_overlap 378282 GAAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTGTAAAACAAAA TERM 410 378298 - 378282 - H 100 -8 -5.59502 | opp_overlap 378282 GAAAAAATGAAAAAA GCAACC TAAGT GGTTGC TTGTGTAAAACAAAA TERM 411 378332 - 378316 - H 71 -2.3 -5.79595 | opp_overlap 378308 GTGTAAAACAAAAAA CATTATC CAA AATAACG TTTTTTGATATGGTT MCAP_0315 378592 - 379707 + | IS3 family transposase TERM 412 379709 - 379694 - f 74 -3.4 -5.67711 | opp_overlap 379694, overlap 379705 TAAATAAAAGAAAAA TTTTAA GAAA TTAAAA ATTTTATTAAAAAAT TERM 413 380395 - 380380 - f 72 -7.6 -3.67003 | opp_overlap 380380, overlap 380378 ATTAGAAATTAAATA GACTAC ATAA GTAGTC TTTTTTTATTTTTAA TERM 414 380380 - 380395 + F 100 -7.6 -6.20267 | opp_overlap 380378 380380 ATTAGAAATTAAATA GACTAC ATAA GTAGTC TTTTTTTATTTTTAA MCAP_0317 380492 - 381184 + | hypothetical protein TERM 415 381793 - 381780 - g 86 -5.3 -5.63236 | ACTGAAAAAGAAAAA TTTGC AGGA GCAAA AGATACTTATACTAT TERM 416 382425 - 382410 - g 70 -6.2 -4.24404 | opp_overlap 382410 382408 382404 ATTGAAATTTTAAAA CAAAAC CAAG GTTTTG TATTAGTTCCGTTTT proS 381165 - 382589 + | prolyl-tRNA synthetase MCAP_0319 382602 - 383222 + | ribonuclease H1, putative MCAP_0320 383224 - 384123 + | hypothetical protein TERM 417 385900 - 385882 - g 70 -7.5 -3.33949 | overlap 385881 AAAGATGAAAGAAAT TGGAACT GTAGA AGTTCCA CAAGAAGCTTTTGTT lepA 384137 - 385939 + | GTP-binding protein LepA MCAP_0322 385973 - 386776 + | hypothetical protein TERM 418 386765 - 386796 + T 82 -9.6 -3.69976 | opp_overlap 386773, overlap 386773 GATGATTATATGACA GGAAAAAAGTAGGC TAAA GCCTACTTTTTTTA TTATTCAACTGTTTT TERM 419 386788 - 386773 - T 95 -9 -5.23316 | opp_overlap 386773 386765 TATGACAGGAAAAAA GTAGGC TAAA GCCTAC TTTTTTTATTATTCA TERM 420 386773 - 386788 + T 100 -9 -5.95946 | opp_overlap 386773, overlap 386765 TATGACAGGAAAAAA GTAGGC TAAA GCCTAC TTTTTTTATTATTCA aspS 388524 - 386797 - | aspartyl-tRNA synthetase TERM 421 388347 - 388363 + g 73 -5.3 -4.91084 | opp_overlap 388349 ATTCATTTTTAAGAT TATTAAT TAA ATTAATA TTTTCTTGTTCAATA hisS 389777 - 388533 - | histidyl-tRNA synthetase TERM 422 388658 - 388670 + g 73 -3.4 -5.52384 | TTAAATATTTTGGAT TCAG TTTAT CTGA TTTTTTTAATGCAGA rbfA 389949 - 390302 + | ribosome-binding factor A TERM 423 390312 - 390330 + F 81 -7.5 -4.65895 | opp_overlap 390305 AAATAATATTAAATT TCCAAGT TCTAC ACTTGGA TTTTTAAATAGAAAA MCAP_0326 390352 - 391230 + | tRNA pseudouridine synthase B, putative TERM 424 391727 - 391706 - g 100 -10.3 -6.23317 | ACAAAAATAAAAAAA CTACTAGAT GAAA ATCTAGTAG ATAAAGCTCAAGAAT MCAP_0327 391217 - 391771 + | riboflavin kinase domain-containing protein TERM 425 391769 - 391786 + T 100 -7.1 -6.04324 | opp_overlap 391769 GATTTAAAGTTAAAA TAGTACT TATA AGTACTA TTTTTTATTTTTTAG TERM 426 391786 - 391769 - T 79 -7.1 -4.36595 | opp_overlap 391769 GATTTAAAGTTAAAA TAGTACT TATA AGTACTA TTTTTTATTTTTTAG MCAP_0328 393832 - 391784 - | hypothetical protein TERM 427 393403 - 393427 + g 80 -5.9 -5.18726 | overlap 393401 TTGGATTTTCGTTTT TTAAATTTTGA AAT TCTAAATTTAA TTTTTCTTCTCCACG MCAP_0329 395682 - 393844 - | putative lipoprotein rpsO 395895 - 396161 + | 30S ribosomal protein S15 TERM 428 396323 - 396308 - f 78 -7.6 -4.22475 | opp_overlap 396308 CATTGAAAATAACAA CAACAC TTAG GTGTTG TTTTTTTATATTCAA TERM 429 396308 - 396323 + F 100 -7.6 -5.80817 | opp_overlap 396308 CATTGAAAATAACAA CAACAC TTAG GTGTTG TTTTTTTATATTCAA TERM 430 396497 - 396507 + G 75 -4 -5.52023 | CAATTAGCTTATTTT TAGT AAT ACTA TTTTTTATTGGTCCT MCAP_0332 396385 - 397035 + | hypothetical protein TERM 431 397020 - 397041 + T 81 -5.9 -5.04356 | opp_overlap 397020 ACTATATAAAAAAAA GACAGATAA TAAT TAATCTGTC TTTTTAATTATTTAA TERM 432 397041 - 397020 - T 100 -5.9 -6.0427 | opp_overlap 397020 ACTATATAAAAAAAA GACAGATAA TAAT TAATCTGTC TTTTTAATTATTTAA infB 398911 - 397049 - | translation initiation factor IF-2 TERM 433 397093 - 397109 + g 78 -6.7 -4.81685 | overlap 397104 CAAATATATCGCCTT CTTTAAT GTC ATTAAAG TTTTTAATAGTTAAT TERM 434 398025 - 398044 + g 77 -7.2 -4.4595 | opp_overlap 398004 398014 398025, overlap 398018 398017 AAAACAACTCCAGAA GCAAATCT ATCT GGATTTGC TTTTAAGTTTTCTAA MCAP_0334 399230 - 398931 - | ribosomal protein L7A family protein MCAP_0335 399504 - 399217 - | hypothetical protein TERM 435 399251 - 399276 + gr 71 -6.3 -4.31329 | opp_overlap 399258, overlap 399258 399272 AATTCTTCTAGTTGA TCATAAATAGA TACA TCTATTTTTGA TTTTAAACTTTTTGC TERM 436 399272 - 399298 + gr 86 -4.6 -5.82172 | overlap 399251 ATAGATACATCTATT TTTGATTTTAAA CTT TTTGCAATCAAA TTTTTTTCTCTTGCT nusA 401155 - 399479 - | transcription elongation factor NusA TERM 437 399796 - 399815 + g 70 -5.1 -4.74801 | TTTTAATTTCAACTT TAGTGAT TTCATC ATCACTA TTTTTAATAACATTA TERM 438 400003 - 400014 + g 73 -3 -5.80727 | opp_overlap 400003, overlap 399996 TAGGTTTTTTAATAA TAGT ATTA ACTA TTTTTTCTTCTTTTT MCAP_0337 401658 - 401164 - | hypothetical protein TERM 439 401710 - 401682 - R 90 -7.5 -5.26316 | opp_overlap 401686, overlap 401686 TTAGTTTAGAAAAAA TAAAGCAAGGTAT TAA AAACCTTGCTTTT AGCTTTATATATTAT TERM 440 401686 - 401706 + r 81 -8.3 -4.41177 | opp_overlap 401682 401686 TTTAGAAAAAATAAA GCAAGGTAT TAA AAACCTTGC TTTTAGCTTTATATA TERM 441 401706 - 401686 - R 93 -8.3 -5.13354 | opp_overlap 401686, overlap 401682 TTTAGAAAAAATAAA GCAAGGTAT TAA AAACCTTGC TTTTAGCTTTATATA MCAP_0338 402394 - 401771 - | nitroreductase family protein polC 406873 - 402434 - | DNA polymerase III, alpha subunit TERM 442 404840 - 404852 + g 80 -3.5 -5.86332 | opp_overlap 404840 ACAACTTGAACCAAA TAATA AAT TATTA TTTTTTTTAACTTCG cdsA 407910 - 406882 - | phosphatidate cytidylyltransferase TERM 443 407178 - 407156 - G 82 -8.6 -4.43571 | opp_overlap 407155 ATAAAAGGAGCAAAA TTTCTTGTTC AAG GAACAAAAAA GATTGTTAAAACTCA TERM 444 407423 - 407409 - G 71 -7.2 -3.95677 | AACCTAAAAAATTAA TTGCTT TAA AAGCAA AAACCATAATTAATA TERM 445 408019 - 408000 - R 74 -2.1 -5.98675 | CATAAAAATAAAAAA GGACACT TAATCT AGCATCC TTAATTAATTTTTGT TERM 446 408096 - 408110 + r 70 -4.4 -5.10601 | opp_overlap 408096 TAAGTACTAATATTA TAAATT ATT AATTTA TTTTTGTAATTTTAT MCAP_0341 409184 - 408108 - | Xaa-Pro peptidase TERM 447 408979 - 408933 - G 71 -8.4 -3.10775 | opp_overlap 408932 408932 408968, overlap 408932 408968 ATTTTTATTTAAAAT TTCAATTAAATCATCTTTTAAA CTT CTTGAAAAATGATGTAATTGAA CATCTTTATTAATTT trpS 409342 - 410352 + | tryptophanyl-tRNA synthetase TERM 448 410377 - 410356 - T 100 -10.3 -5.56263 | opp_overlap 410356 AGTAGAAAATAAAAA GGACTTAAA ATTA TTTAAGTCC TTTTTTAATGAGTAA TERM 449 410356 - 410377 + T 100 -10.3 -5.1675 | opp_overlap 410356 AGTAGAAAATAAAAA GGACTTAAA ATTA TTTAAGTCC TTTTTTAATGAGTAA MCAP_0343 411272 - 410382 - | hypothetical protein TERM 450 411278 - 411303 + H 79 -4.9 -5.34655 | TATTTTCCATATTTT GATTATATAAA ACTA TTTATAGAATC TTTTATTTTTAGTTA MCAP_0344 411606 - 412175 + | Fic family protein TERM 451 413949 - 413931 - g 73 -3.2 -5.55855 | TTGAAAAAAAGAAAA TGTAACTT CTG AATTTACA AGTAAGTTTAATTTT MCAP_0345 412795 - 415050 + | hypothetical protein MCAP_0346 415071 - 417659 + | putative lipoprotein TERM 452 417673 - 417695 + F 87 -7.1 -5.26875 | opp_overlap 417668 417673 AATAGAAACATAAAA TCCTTTGGT TAATT ACTAAAGGA TTTTTTAATTAAAAA TERM 453 417695 - 417673 - f 70 -4.9 -4.88684 | opp_overlap 417673, overlap 417668 AATAGAAACATAAAA TCCTTTGGT TAATT ACTAAAGGA TTTTTTAATTAAAAA MCAP_0347 417869 - 420121 + | hypothetical protein TERM 454 421895 - 421874 - g 70 -4.5 -5.08878 | opp_overlap 421874 421871 421876, overlap 421876 AAGACACAAATAAAA TAGTTAGTT TAAT AACTAACAA TTATTTTATAAGTGA TERM 455 421893 - 421876 - g 73 -7.1 -4.14158 | opp_overlap 421876 421874 421871, overlap 421874 GACACAAATAAAATA GTTAGTT TAAT AACTAAC AATTATTTTATAAGT TERM 456 421929 - 421919 - g 79 -4 -5.66684 | TAAGTGATAAAAAAA TTCA ATT TGAA TCTGAATCATTGTTA TERM 457 422195 - 422179 - g 70 -3.7 -5.10497 | opp_overlap 422179 AATCTAGTTAAAAAA GAAGG AACCCCA CCTTC ATTTAAAGAATATGA MCAP_0348 420139 - 422718 + | putative lipoprotein TERM 458 422728 - 422749 + F 100 -10.3 -5.19212 | opp_overlap 422728 GTATAATTCTAATAA TCCTTTAGT GAAA ACTAAAGGA TTTTTTACTAGTAAT TERM 459 422749 - 422728 - f 85 -10.3 -3.6968 | opp_overlap 422728 GTATAATTCTAATAA TCCTTTAGT GAAA ACTAAAGGA TTTTTTACTAGTAAT TERM 460 422951 - 422967 + G 86 -9.5 -4.07831 | TTAACAATGGCATTA GTAGCTA GTT TAGCTAC TTCTCTTTCTTTTGG MCAP_0349 422903 - 425152 + | hypothetical protein TERM 461 426681 - 426667 - g 73 -2.8 -5.73339 | AGAATGATAAAAAAA TAACTG ATG CTGTTA CAACTATTTTTCATG MCAP_0350 425172 - 427751 + | putative lipoprotein TERM 462 427773 - 427794 + F 100 -8.1 -5.65513 | opp_overlap 427771 427773, overlap 427777 AATTTTGTAATAATA TCCTTTAGA AAAA TCTAAGGGA TTTTTTTAATTAATA TERM 463 428059 - 428075 + G 86 -9.5 -4.07831 | TTAACAATGGCATTA GTAGCTA GTT TAGCTAC TTCTCTTTCTTTTGG MCAP_0351 428011 - 430263 + | hypothetical protein TERM 464 430924 - 430908 - g 80 -9.5 -3.26836 | overlap 430906 430902 TTAAAAGAATATAGA GGTTTAG ATA CTAAACC TGACCATATTAAAAA MCAP_0352 430287 - 432854 + | putative lipoprotein MCAP_0353 432889 - 434352 + | hypothetical protein MCAP_0354 434327 - 434821 + | hypothetical protein MCAP_0355 434823 - 435734 + | hypothetical protein MCAP_0356 435734 - 436177 + | hypothetical protein TERM 465 437112 - 437140 + G 77 -7 -4.37711 | gap 1, overlap 437112 437113 ATTAAAAATAGATTT G-TTGATTTTGAT TTAA ATCAAAATCAAGC TTTTCAGTTTAATAC TERM 466 437113 - 437138 + G 81 -10.7 -2.52419 | overlap 437112 437112 TTAAAAATAGATTTG TTGATTTTGAT TTAA ATCAAAATCAA GCTTTTCAGTTTAAT MCAP_0357 436179 - 438446 + | hypothetical protein TERM 467 438729 - 438748 + G 71 -6.6 -4.18018 | opp_overlap 438728 438724 438729 TTTTGGAAAAGTAAT TGATATTT ATGG AAATATCA TTTTACCTGAACAAA TERM 468 439034 - 439024 - g 79 -4 -5.75945 | ATTGGTCAAAAAAAA GAAA GTA TTTC AAGAATTTATAACAT atpA2 438451 - 439998 + | F0F1 ATP synthase subunit alpha atpD2 439998 - 441377 + | F0F1 ATP synthase subunit beta TERM 469 441416 - 441388 - T 78 -9 -3.52906 | opp_overlap 441393, overlap 441393 TATAATTTTAGATAA TAAAAGCAAGAC TTTAT GTCTTGCTTTTT ATATTAATTAATTTA TERM 470 441393 - 441411 + T 95 -8.9 -5.1485 | opp_overlap 441388 441393 TTTTAGATAATAAAA GCAAGAC TTTAT GTCTTGC TTTTTATATTAATTA TERM 471 441411 - 441393 - T 91 -8.9 -4.84311 | opp_overlap 441393, overlap 441388 TTTTAGATAATAAAA GCAAGAC TTTAT GTCTTGC TTTTTATATTAATTA MCAP_0360 443936 - 441432 - | hypothetical protein TERM 472 443588 - 443602 + g 71 -5.8 -4.56961 | GTTCTATTTTTGGAT CTAAAA CAT TTTTAG TTTTGTATGAATCTT TERM 473 443660 - 443679 + g 81 -8 -4.55023 | opp_overlap 443662 CAAATGTGTTTATAT TACTGATA CTCT TATCAGTA TTTTCTAATGTTAAA TERM 474 443706 - 443730 + g 81 -7.3 -4.855 | opp_overlap 443713, overlap 443713 TAAATTATTTTCTTT TAATAAATCAC TTA GTGATTTTTTA TTGTTTTTATTTTTA TERM 475 443713 - 443723 + g 86 -5.4 -5.80727 | opp_overlap 443713, overlap 443706 TTTTCTTTTAATAAA TCAC TTA GTGA TTTTTTATTGTTTTT TERM 476 444144 - 444174 + r 74 -8.4 -3.27246 | opp_overlap 444145, overlap 444143 444145 AATAAGCAATAAAAA AGCAAGATCTTATA ATA TTTAAGATCTTGCA GTTTTAGTTAATAAT TERM 477 444173 - 444145 - R 100 -11.9 -5.57396 | opp_overlap 444144 444143 444145 ATAAGCAATAAAAAA GCAAGATCTTATA ATA TTTAAGATCTTGC AGTTTTAGTTAATAA TERM 478 444145 - 444173 + r 88 -11.9 -2.55624 | opp_overlap 444145, overlap 444144 444143 ATAAGCAATAAAAAA GCAAGATCTTATA ATA TTTAAGATCTTGC AGTTTTAGTTAATAA TERM 479 444178 - 444202 + r 86 -6.7 -5.16472 | TAAGATCTTGCAGTT TTAGTTAATAA TGA TTATTAATTAA TTTTTTGAGATTTTT MCAP_0361 446745 - 444199 - | hypothetical protein TERM 480 445728 - 445743 + g 72 -6.2 -4.50943 | overlap 445732 TTGATTCTATATTTT GATCTT TATA AAGATC TTTTATAAATTGTTG TERM 481 446196 - 446168 - G 85 -10.6 -3.06312 | opp_overlap 446160 446166 446163 446161 AAAGTTTTTATTCAA TTTGAAAAACTT GGTTT AAGTTTTTCAAA GAATGTGTTTAAAGC TERM 482 446463 - 446482 + g 83 -8 -4.67635 | opp_overlap 446465 CAAATGTGTTTATAT TACTGATA CTCT TATCAGTA TTTTCTAATTTTAAA TERM 483 446863 - 446836 - R 93 -7.2 -5.43974 | opp_overlap 446836 446834 AAAAGTAAATAAAAA GTTCAAATGT CTTTTTTT ACATTTGAAC TAGTTTTTTAACAAA MCAP_0362 449406 - 446899 - | hypothetical protein TERM 484 449747 - 449732 - g 76 -6.2 -4.88405 | overlap 449720 AACCTTTAAACAAAA TGCTTT ATTA AAAGCA AAGCATCTAGCTAAA MCAP_0363 449586 - 450185 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 485 450262 - 450242 - g 71 -6.9 -4.09215 | opp_overlap 450242 TATATCAACCAGAAA TTGCTCAAA ATG TTGGAGCAA TTATGAGAACATGTG MCAP_0364 450199 - 450744 + | RNA methyltransferase TERM 486 450920 - 450907 - g 73 -2.4 -5.7946 | opp_overlap 450918, overlap 450909 450918 GTGCTAATAAAAAAA TAGC AAAACA GCTA AAAGTTAGTTTGCCT MCAP_0365 450744 - 451610 + | HAD superfamily hydrolase TERM 487 451667 - 451678 + F 95 -5.8 -6.12458 | opp_overlap 451667 ATTTTAATTATTTAA GACC AAAA GGTC TTTTTTATTTTTTTA MCAP_0366 451775 - 453916 + | ATP-dependent Clp protease, ATP-binding subunit ClpB, putative TERM 488 454630 - 454618 - g 78 -6.3 -5.06961 | opp_overlap 454617 ATGAACAAAAAGAAA CTCAT GGA ATGAG ATATATGTTAGAAAA hrcA 453921 - 454943 + | heat-inducible transcription repressor HrcA TERM 489 454988 - 454974 - g 86 -2.2 -6.47325 | AAAAAATAAAAAAAA TAATAA AAA CTATTA TAGTCAAAATAAAAA grpE 454927 - 455547 + | co-chaperone GrpE dnaK 455607 - 457382 + | chaperone protein dnaK TERM 490 457397 - 457422 + F 90 -8.5 -4.82901 | opp_overlap 457397 457403, overlap 457403 ATCACACTAAATATA TAAAAACTAAC ATTG GTTAGTTTTTG TTTTTATAGAAAAGA TERM 491 457416 - 457403 - f 76 -5.3 -5.14985 | opp_overlap 457397 457403, overlap 457397 CTAAATATATAAAAA CTAAC ATTG GTTAG TTTTTGTTTTTATAG TERM 492 457403 - 457416 + F 82 -5.3 -5.69262 | opp_overlap 457403 457397, overlap 457397 CTAAATATATAAAAA CTAAC ATTG GTTAG TTTTTGTTTTTATAG TERM 493 457661 - 457635 - g 90 -8 -4.91778 | opp_overlap 457634 457635, overlap 457641 TAAAGATAAAAGAAA GCAATATGACCA ATT TGGTCATCGTGC ATTTGATAATTCATC TERM 494 457655 - 457641 - g 74 -8.6 -3.47652 | opp_overlap 457635 457634, overlap 457635 TAAAAGAAAGCAATA TGACCA ATT TGGTCA TCGTGCATTTGATAA dnaJ 457447 - 458565 + | chaperone protein dnaJ TERM 495 458566 - 458581 + F 73 -4.7 -5.30155 | opp_overlap 458566 AATATAAACCAATAA GCAGA TTAATT TCTGC TTTTTTAATTAATGC rpsB 458769 - 459644 + | 30S ribosomal protein S2 TERM 496 459738 - 459728 - g 75 -5.4 -5.05782 | ATGGATTGTAAAAAA GCTT TAG AAGC AAGTGATAATAATAT TERM 497 459884 - 459894 + G 71 -5.4 -4.63218 | ATTTTAGAAGTTAAT TCAG AAA CTGA TTTTGTTGCAAAAAA tsf 459656 - 460543 + | elongation factor Ts TERM 498 461062 - 461045 - g 70 -4.9 -4.77986 | opp_overlap 461045 TCAAATATCCAAAAA CTTGTTC ATTT AAACAAG TAATTTTAGATAATT MCAP_0373 460546 - 461151 + | hypothetical protein TERM 499 461158 - 461176 + F 100 -6.8 -5.76633 | opp_overlap 461158 TTATCTTAGAATAAA GTATGATT TAT GATCATAC TTTTTTTATATATAA TERM 500 461176 - 461158 - f 71 -6.1 -4.32177 | opp_overlap 461158 TTATCTTAGAATAAA GTATGAT TTATG ATCATAC TTTTTTTATATATAA pyrH 461283 - 461996 + | uridylate kinase frr 462007 - 462555 + | ribosome recycling factor argS 462557 - 464221 + | arginyl-tRNA synthetase TERM 501 464642 - 464629 - f 77 -6.7 -4.58236 | overlap 464624 GAGAAAAGATCAAAA GAACC GTTT GGTTC ACTATGAGATGGGGA TERM 502 466530 - 466515 - f 72 -7.6 -3.75824 | CATTGTATAATAGAA GCTACT GGGA AGTAGC GCCATAGAGGGTGAT TERM 503 468643 - 468627 - f 79 -7.3 -4.4715 | GCTCAACGGATAAAA GTTACCC CGG GGATAAC AGGCTTATCTCCCCC TERM 504 468864 - 468883 + F 74 -8.6 -3.21395 | gap 1, opp_overlap 468867, overlap 468868 CGAGAGGACCGGAAT GGATGCACC TCT GGTGC-TCC TGTTGTCACGCCAGT TERM 505 468868 - 468880 + F 74 -9.1 -2.80074 | opp_overlap 468867, overlap 468864 AGGACCGGAATGGAT GCACC TCT GGTGC TCCTGTTGTCACGCC TERM 506 469267 - 469281 + F 95 -5.7 -6.28967 | opp_overlap 469267, overlap 469264 GCTGCCAGTTTATAA GAACC TTAGT GGTTC TTTTTTTTGTTTCTC TERM 507 471215 - 471225 + G 72 -4 -5.41359 | opp_overlap 471215 TTGCATTTAAAACAT GATT AAC AATC TTTTTTGGTTTAATT TERM 508 472317 - 472327 + G 70 -4 -5.2204 | AGCACAAGCTTATAG TTTG TAT CAAA TTTTTATTAATTATA MCAP_0381 469387 - 473832 + | hypothetical protein MCAP_0382 473844 - 474452 + | hypothetical protein TERM 509 475400 - 475388 - g 70 -6.3 -4.19735 | CGTTTTAAAATTAAA TGGAT TAG ATCCA ACTAAATGCTCAGGA pheS 474483 - 475535 + | phenylalanyl-tRNA synthetase, alpha subunit pheT 475544 - 477928 + | phenylalanyl-tRNA synthetase, beta subunit MCAP_0385 477928 - 478443 + | hypothetical protein rpmF 478458 - 478637 + | 50S ribosomal protein L32 TERM 510 478656 - 478674 + F 100 -10.4 -6.20267 | CATTATTTTTAATTT GGTTGTAT TTA ATACAACC TTTTTTTATTTTTAA MCAP_0387 478742 - 479140 + | cell division protein MraZ TERM 511 479371 - 479341 - g 79 -5.1 -5.54338 | gap 1, opp_overlap 479344 CAAGCAAAAGAAAAA TTAG-AAAAAATTA GTAA TAATTTTTTTCTAA TTCAAGGCAATTTTT mraW 479149 - 480078 + | S-adenosyl-methyltransferase MraW MCAP_0389 480087 - 481244 + | hypothetical protein ftsZ 481359 - 482498 + | cell division protein FtsZ MCAP_0391 482511 - 482954 + | hypothetical protein MCAP_0392 482987 - 483976 + | hypothetical protein TERM 512 484112 - 484127 + F 81 -4 -5.9362 | AATAAAACTAAAAAT GAGCTT TTAA AAGTTC TTTTTTTGTCTTTTA TERM 513 484512 - 484530 + F 100 -6.7 -5.64873 | opp_overlap 484512, overlap 484504 TGGTACCGCGGTAAA TCGCTCC TTAAT GGAGTGA TTTTTTGTTATTAGA TERM 514 484736 - 484757 + G 75 -8.9 -3.26473 | CATGATGGACCACCT TATGCAAAT GGAG ATTTGCATA TTGGTCATGCTTTAA ileS 484559 - 487285 + | isoleucyl-tRNA synthetase TERM 515 487341 - 487327 - g 75 -5.8 -5.02323 | CTAGTAGAAACAAAA GTTTTT TTA AAAAAC CACAATTATCTTTGA lspA 487294 - 487902 + | signal peptidase (SPase) II MCAP_0395 487883 - 488851 + | ribosomal large subunit pseudouridine synthase A MCAP_0396 488835 - 490145 + | hypothetical protein TERM 516 490601 - 490643 + G 100 -9.4 -5.4505 | opp_overlap 490599 490611, overlap 490607 490638 TATATAAAATTACCA GATATTGAAATTAGTCTTAA AGT TAAAGACTAATTTCTTTATC TTTTTTATTGAAAAG TERM 517 490607 - 490637 + G 100 -11.4 -4.7064 | opp_overlap 490599 490611, overlap 490601 AAATTACCAGATATT GAAATTAGTCTTAA AGT TAAAGACTAATTTC TTTATCTTTTTTATT MCAP_0397 490172 - 490633 + | deoxycytidylate deaminase TERM 518 491023 - 491009 - g 79 -7.2 -4.69487 | AAAGATACAAACAAA TACACT AAA AGTGTA AAAATTCCTTGTTAT TERM 519 491432 - 491415 - g 83 -3.5 -6.11229 | ATCAAAAGAAAAAAA TAACAGT TAAA ACTATTA GTAGTTCTCAATTTG MCAP_0398 490673 - 491827 + | hypothetical protein MCAP_0399 491908 - 493293 + | hypothetical protein MCAP_0400 493313 - 493645 + | holo-(acyl-carrier-protein) synthase, putative TERM 520 494116 - 494099 - g 70 -3.5 -5.33866 | overlap 494092 494090 494088 CAAATTTAGAAAAAA TTTCTAT AAAC ACAGAAA CAGAAATTTTAAAAC MCAP_0401 493687 - 494838 + | hypothetical protein TERM 521 494873 - 494930 + F 70 -4.8 -4.95896 | gap 2, opp_overlap 494881 AATAATATATCTATA TAAGAGAATATTCTTGTAAAATAATT GATGATAA AATTAT-TTACA-GAATAGTCTCTTA TTTTTATAAATTTAT MCAP_0402 494973 - 495926 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative TERM 522 495911 - 495938 + F 82 -9.4 -3.73873 | opp_overlap 495916, overlap 495916 AATTAAAGATTTATT TAAAATTGTTGA TTAA TCAGCAATTTTA TTATCTTAAATTTAA TERM 523 495916 - 495933 + F 70 -4.9 -4.90381 | opp_overlap 495916, overlap 495911 AAGATTTATTTAAAA TTGTTGA TTAA TCAGCAA TTTTATTATCTTAAA MCAP_0403 495977 - 496594 + | hypothetical protein TERM 524 497159 - 497176 + T 83 -3.4 -6.14618 | opp_overlap 497159 CATTTTGAAAATCAA CATGCT ATAAAA GGCATG TTTTTTTATTTTCTA TERM 525 497210 - 497227 + T 71 -7.1 -3.79831 | opp_overlap 497210 TTTAAATAAAAAAAA TGAATCT CAAA AGATTCA TTAATTTATTATTTT TERM 526 497227 - 497210 - T 100 -7.1 -6.23545 | opp_overlap 497210 TTTAAATAAAAAAAA TGAATCT CAAA AGATTCA TTAATTTATTATTTT MCAP_0409 498314 - 497250 - | putative lipoprotein TERM 527 497939 - 497949 + g 70 -4 -5.1286 | TTCATCTTTCTTTTT TAGT TTT ACTA TTTTTGTCCTTTTTA TERM 528 498628 - 498641 + H 100 -5.3 -6.5058 | opp_overlap 498615 498628 CACAAACAAAAAAAA TAGTC ATTT GACTA TTTTTTTTTATTTAT TERM 529 498641 - 498628 - H 91 -5.3 -6.28967 | opp_overlap 498628, overlap 498615 CACAAACAAAAAAAA TAGTC ATTT GACTA TTTTTTTTTATTTAT MCAP_0410 498691 - 499581 + | hypothetical protein TERM 530 499727 - 499745 + G 76 -6 -4.82678 | TTTCTAATTTTATAA CCGATGTT GCA AGCATTGG TTTTGCTTTTTATCA MCAP_0411 499603 - 500004 + | hypothetical protein rplU 500149 - 500451 + | 50S ribosomal protein L21 MCAP_0413 500454 - 500768 + | hypothetical protein rpmA 500770 - 501051 + | 50S ribosomal protein L27 TERM 531 501059 - 501074 + F 100 -7.6 -6.04419 | CTAACTAATGTTTAA GAACTC TTTT GAGTTC TTTTTTTATTATTTT TERM 532 501164 - 501146 - f 84 -6.2 -5.29716 | opp_overlap 501146 501145 501148, overlap 501158 501160 GTAAGATAAGAAAAA TATTATAT TAG ATATAATA ATATTATAAGGACAG nanA 501245 - 502132 + | N-acetylneuraminate lyase MCAP_0416 502136 - 503848 + | sodium/solute symporter family protein MCAP_0417 503857 - 504306 + | hypothetical protein MCAP_0418 504299 - 505174 + | ROK family protein TERM 533 505184 - 505202 + F 100 -10.4 -5.20781 | AATTAGAATTTCTAA CCTCTAAT TAA ATTAGAGG TTTTGTTTTATAATA MCAP_0419 505254 - 505934 + | N-acetylmannosamine-6-phosphate 2-epimerase TERM 534 505975 - 505991 + F 100 -8.1 -5.40072 | TTTGTTTTTTGTTTA GACTATA GGA TATAGTC TTTTTTTAAGCCAAA MCAP_0420 506088 - 507437 + | dipeptidase, putative MCAP_0421 507518 - 507952 + | hypothetical protein udk 507977 - 508600 + | uridine kinase TERM 535 508607 - 508632 + F 75 -2.7 -5.95539 | gap 1, opp_overlap 508607 508602 TTAAATTAACTAAAA CTGCAAAT-TAA TTT TTATAATTGCAG TTTTTTTATTTAAAC TERM 536 509030 - 509048 + G 70 -7.5 -3.46872 | opp_overlap 509023 509030 509029, overlap 509023 509029 AAATAAAATTGAAAT TGCTTCA ATTGA TGAAGCA TATTTAGATGTTAGT MCAP_0423 508728 - 509954 + | ImpB/MucB/SamB family protein TERM 537 509959 - 509943 - T 100 -6.6 -5.54264 | overlap 509931 AAAGATTTAAAAAAA TCAAGC AAATA GCTTGA TTAAAGATTAAATTA MCAP_0424 511070 - 509967 - | hypothetical protein TERM 538 510568 - 510600 + g 79 -5 -5.51353 | ATTAAACTAGATTTA CCAACATTACTT GCTCCAATA AAGTATTGTTGG TTTTTATTATTTTTA MCAP_0425 511999 - 511079 - | hypothetical protein TERM 539 511620 - 511647 + g 82 -4.4 -5.75945 | overlap 511621 ATAATTGTTTTTATG TTTTTATTAATA CACA TATTAATAAAAC TTTTTTTTAACAAAT TERM 540 511621 - 511646 + g 77 -7.9 -4.04482 | overlap 511620 TAATTGTTTTTATGT TTTTATTAATA CACA TATTAATAAAA CTTTTTTTTAACAAA TERM 541 512091 - 512101 + G 73 -5.4 -4.81306 | opp_overlap 512091 TGATAAATAATATTA CTGT TAA ACAG TTCTTTTTTATTACA MCAP_0426 512075 - 512890 + | hypothetical protein TERM 542 512901 - 512923 + T 100 -9.3 -5.64321 | AATAATTTTTTTATA GCTTATAGA ATAAC TCTATAAGC TTTTTATTTTATTAT MCAP_0427 514296 - 512935 - | dihydrolipoamide dehydrogenase ruvA 515911 - 515351 - | Holliday junction DNA helicase ruvA, putative TERM 543 516000 - 515983 - R 95 -6.3 -5.68039 | opp_overlap 515983 AAATGCATAAAAAAA GAGCCTT TATA AAGACTC TTAATTAAAAATTAT rpsU 516186 - 516022 - | 30S ribosomal protein S21 MCAP_0431 516454 - 517083 + | putative lipoprotein TERM 544 517130 - 517110 - f 71 -5.4 -4.6951 | opp_overlap 517112 517117, overlap 517112 ATTATTTAAAATAAA GACTTGGG AAAAA CCCAAGTT TTTCTTTATTTCTAT TERM 545 517128 - 517112 - f 76 -8 -3.95475 | opp_overlap 517112 517117, overlap 517110 TATTTAAAATAAAGA CTTGGG AAAAA CCCAAG TTTTTCTTTATTTCT TERM 546 517112 - 517128 + F 100 -8 -5.56573 | opp_overlap 517110 517112, overlap 517117 TATTTAAAATAAAGA CTTGGG AAAAA CCCAAG TTTTTCTTTATTTCT TERM 547 517117 - 517134 + F 79 -7.1 -4.69487 | opp_overlap 517112 517110, overlap 517112 AAAATAAAGACTTGG GAAAAAC CCAA GTTTTTC TTTATTTCTATATTT TERM 548 517224 - 517251 + F 89 -10.2 -4.46155 | opp_overlap 517229 517231 517233 517235 TACTTAAAACCTTGA CATTATATATAT ATAT ATATATATAATG TTTTCTGGCTATATA MCAP_0432 517320 - 518039 + | putative lipoprotein TERM 549 518083 - 518057 - f 95 -9.5 -5.10877 | opp_overlap 518061, overlap 518061 AGAATAAATCAAAAA TAAAGGCTTGG GTTTT CCAAGCCTTTT ATTATAGTTACTATT TERM 550 518079 - 518061 - f 100 -10.3 -5.00388 | opp_overlap 518061, overlap 518057 TAAATCAAAAATAAA GGCTTGG GTTTT CCAAGCC TTTTATTATAGTTAC TERM 551 518061 - 518079 + F 100 -11 -4.84492 | opp_overlap 518061 518057 TAAATCAAAAATAAA GGCTTGGG TTT TCCAAGCC TTTTATTATAGTTAC TERM 552 518172 - 518209 + F 100 -14.7 -4.46155 | opp_overlap 518177 518179 518181 518183 518185 518187 518189 518191 TACTTAAAACCTTGA CATTATATATATATATA TATA TATATATATATATAATG TTTTCTGGCTATATA TERM 553 518206 - 518177 - f 75 -9.7 -2.64375 | opp_overlap 518172, overlap 518179 518181 518183 518185 518187 518189 518191 AAAACCTTGACATTA TATATATATATAT ATAT ATATATATATATA ATGTTTTCTGGCTAT TERM 554 518206 - 518179 - f 72 -8.8 -2.85847 | opp_overlap 518172, overlap 518177 518181 518183 518185 518187 518189 518191 AACCTTGACATTATA TATATATATATA TATA TATATATATATA ATGTTTTCTGGCTAT TERM 555 518444 - 518434 - g 75 -4 -5.54403 | AAAAAAGAAGAAAAA CTAA CTA TTAG TGAATCAACAAAAAA MCAP_0433 518278 - 518916 + | putative lipoprotein TERM 556 518951 - 518923 - T 100 -10.4 -5.30348 | opp_overlap 518927, overlap 518927 ACTGAATAATAAAAA CAAAGGCTTGGA TAACT TCCAAGCCTTTT ATTTAGTTGACACTA TERM 557 518947 - 518927 - T 100 -11.2 -5.11254 | opp_overlap 518927, overlap 518923 AATAATAAAAACAAA GGCTTGGA TAACT TCCAAGCC TTTTATTTAGTTGAC TERM 558 518927 - 518947 + T 100 -11.2 -4.99947 | opp_overlap 518927 518923 AATAATAAAAACAAA GGCTTGGA TAACT TCCAAGCC TTTTATTTAGTTGAC MCAP_0434 520697 - 518964 - | hypothetical protein MCAP_0435 520850 - 522502 + | hypothetical protein MCAP_0436 522507 - 523106 + | hypothetical protein TERM 559 523112 - 523134 + T 100 -9.3 -6.07374 | opp_overlap 523112 AGAAGATTAAAAAAA TCGTAACTA ATTAA TAGTTACGA TTTTTTCTTTTTTCT TERM 560 523134 - 523112 - T 100 -9.3 -5.6473 | opp_overlap 523112 AGAAGATTAAAAAAA TCGTAACTA ATTAA TAGTTACGA TTTTTTCTTTTTTCT MCAP_0437 523927 - 523118 - | hypothetical protein TERM 561 523885 - 523857 - G 79 -9.1 -3.51442 | opp_overlap 523862 523882, overlap 523855 523858 GATAATAACATAACA GCTAATTGAAAAT ATC ATTTTCAATTAGT AAATCTACTATTTTT TERM 562 523884 - 523858 - G 90 -12.6 -2.6978 | opp_overlap 523862 523882, overlap 523857 523855 ATAATAACATAACAG CTAATTGAAAAT ATC ATTTTCAATTAG TAAATCTACTATTTT nagA 524021 - 525178 + | N-acetylglucosamine-6-phosphate deacetylase ldh 525231 - 526184 + | L-lactate/malate dehydrogenase TERM 563 526238 - 526209 - T 87 -9.5 -4.45817 | opp_overlap 526209 526216, overlap 526216 AATTTAATAAAACAA TAAAAAATGCAGT TTAA ACTGCATTTTTTT AATCTATTTAACTAG TERM 564 526231 - 526216 - T 100 -7.6 -5.77677 | opp_overlap 526216 526209, overlap 526209 TAAAACAATAAAAAA TGCAGT TTAA ACTGCA TTTTTTTAATCTATT TERM 565 526216 - 526231 + T 100 -7.6 -5.62219 | opp_overlap 526209 526216, overlap 526209 TAAAACAATAAAAAA TGCAGT TTAA ACTGCA TTTTTTTAATCTATT MCAP_0440 526912 - 526250 - | hypothetical protein TERM 566 527010 - 526987 - R 77 -8.4 -3.75153 | opp_overlap 526982 526986 TTCTTTTAATTTAAA TTTTTTAATC ATTT GATTAAAAAA AGTCTTGTCAATAAT MCAP_0441 527469 - 527269 - | hypothetical protein MCAP_0442 528965 - 527481 - | putative lipoprotein TERM 567 527874 - 527856 - G 81 -9 -3.9398 | TGATAATTGCATAAA TGAAAGTA ATT TACTTTCA AAATTTCTAATTTTT TERM 568 528521 - 528531 + g 72 -4 -5.28983 | CTTCAGCATTTATTC TAGT ATT ACTA TTTTTATCTTTTAGC TERM 569 529151 - 529134 - H 89 -6.3 -5.4505 | opp_overlap 529134 TTTTTTAATAAAAAA CTTGCAC TAAA ATGCAAG TTATTATTATCTATT MCAP_0443 529220 - 529492 + | hypothetical protein TERM 570 530056 - 530072 + G 78 -8.1 -3.89346 | opp_overlap 530054 530056 TAATTTCAATCAAGA CATTTCA AAA TGAAATG TTTCTAAAGTAAAAA TERM 571 530072 - 530056 - g 72 -8.1 -3.25539 | opp_overlap 530056, overlap 530054 TAATTTCAATCAAGA CATTTCA AAA TGAAATG TTTCTAAAGTAAAAA MCAP_0444 529607 - 530716 + | hypothetical protein MCAP_0445 531539 - 530742 - | triacylglycerol lipase MCAP_0446 532341 - 531553 - | triacylglycerol lipase, putative TERM 572 532504 - 532482 - H 71 -8 -3.25595 | overlap 532485 TTAAAATTAAAATGA TAATTTATAT AAA ATATAAATTA GAGTTTATATATGAA MCAP_0447 532528 - 532872 + | glycine cleavage system H protein, putative TERM 573 533196 - 533222 + G 91 -10.4 -3.67989 | opp_overlap 533201 533202 533211, overlap 533202 AACAACTAATAGTGA TCAAAGTTTAGA AGA TCTAAATTTTGA TTTAAATAAAATTTT TERM 574 533202 - 533216 + G 71 -5.8 -4.56914 | opp_overlap 533201 533202 533211, overlap 533196 TAATAGTGATCAAAG TTTAGA AGA TCTAAA TTTTGATTTAAATAA TERM 575 533514 - 533496 - g 70 -3.2 -5.30448 | AAATAAATATAAAAA TCAAAAAA TTT TATTTTGA GAAATTGGAGTTAAT MCAP_0448 532879 - 533730 + | hypothetical protein MCAP_0449 533708 - 534745 + | lipoate-protein ligase TERM 576 534798 - 534763 - g 75 -5.6 -4.97461 | overlap 534766 AATAAATATGAAAAA TTATTTGAACCCTTTT ATTT AAATGGATTCAAATTA GAAAATCGCTTTGTA MCAP_0450 534745 - 535923 + | NADH:flavin oxidoreductase/NADH oxidase family protein TERM 577 536143 - 536162 + T 77 -9.4 -3.02984 | opp_overlap 536143, overlap 536142 TATAAAAATAAAAAA GTTAGCTT ATAT AAGCTAAC ATTTATAAATTTTGA TERM 578 536162 - 536143 - T 100 -9.4 -5.98675 | opp_overlap 536142 536143 TATAAAAATAAAAAA GTTAGCTT ATAT AAGCTAAC ATTTATAAATTTTGA MCAP_0451 538070 - 536187 - | lipoprotein, putative (LppB) TERM 579 536818 - 536838 + g 81 -7.7 -4.51994 | opp_overlap 536818 536816 GGATCTTTTAAAACA TCATCTTTA AAA TAAGGATGA TTTCTTGTTAATTGA TERM 580 538202 - 538175 - R 71 -3.5 -5.44119 | overlap 538164 TTCATTTTAAAAAAA GATTGATAGTT AATTAA ATCTACCAATC TTTTTAGAAAAACTT gtsC 538987 - 538184 - | glycerol ABC transporter, permease gtsB 539969 - 538965 - | glycerol ABC transporter, permease gtsA 541173 - 539962 - | glycerol ABC transporter, ATP-binding protein MCAP_0455 543374 - 541179 - | RecD/TraA family helicase TERM 581 543464 - 543484 + r 95 -11.3 -4.15881 | opp_overlap 543464 ATTATAAATTAAAAA GGTTCAAAT ATA ATTTGAACC TTATTTATCGTCTTT TERM 582 543484 - 543464 - R 100 -11.3 -5.05505 | opp_overlap 543464 ATTATAAATTAAAAA GGTTCAAAT ATA ATTTGAACC TTATTTATCGTCTTT parC 546184 - 543485 - | DNA topoisomerase IV, A subunit TERM 583 544465 - 544477 + g 74 -6.3 -4.59376 | CAACACTGTTTATAT GAACA CCT TGTTC TTTTCATTTACTAGT parE 548117 - 546186 - | DNA topoisomerase IV, B subunit TERM 584 546502 - 546487 - G 74 -4.8 -5.22481 | opp_overlap 546482 546487 546485, overlap 546482 CATAAATAAATAAAA CTTTTA TCAT TAAAAG TAATTTTATATAAAG TERM 585 546967 - 546977 + g 71 -5.4 -4.64657 | overlap 546975 CTTGCTTGTTTTGCT GCAA TTC TTGC TTTTTGAGCATTTAA MCAP_0458 548347 - 549924 + | PTS system, mannitol-specific IIBC component MCAP_0459 549927 - 550367 + | PTS system, mannitol-specific IIA component MCAP_0460 550367 - 551266 + | 6-phosphogluconate dehydrogenase-like protein TERM 586 551285 - 551304 + T 100 -9.4 -5.17054 | opp_overlap 551285 TAAAAATAAAAAAAA TCCAAGTT AGAA AACTTGGA TTTTTTAACTATTAT TERM 587 551304 - 551285 - T 100 -9.4 -6.4275 | opp_overlap 551285 TAAAAATAAAAAAAA TCCAAGTT AGAA AACTTGGA TTTTTTAACTATTAT MCAP_0461 552736 - 551321 - | aldehyde dehydrogenase (NAD) family protein TERM 588 552890 - 552857 - R 91 -9.1 -4.92669 | opp_overlap 552865, overlap 552865 TATATAAAAAAATAA TAAAAAAAGTTCGAT ATTA ATCGAACTTATTCTA ACTATTAATAAACTA TERM 589 552865 - 552882 + r 79 -8.5 -3.84639 | opp_overlap 552857 552865 AAAATAATAAAAAAA GTTCGAT ATTA ATCGAAC TTATTCTAACTATTA TERM 590 552882 - 552865 - R 100 -8.5 -6.04419 | opp_overlap 552865, overlap 552857 AAAATAATAAAAAAA GTTCGAT ATTA ATCGAAC TTATTCTAACTATTA MCAP_0462 553670 - 552903 - | RNA methyltransferase TERM 591 553505 - 553525 + g 80 -6.9 -5.05228 | opp_overlap 553505 553504, overlap 553507 TTAACACTTCTAAAG CTTTACTAG TAC CTAGTAATG TTTTTATAATTTGAT TERM 592 553507 - 553523 + g 79 -8.1 -4.13732 | opp_overlap 553505 553504, overlap 553505 AACACTTCTAAAGCT TTACTAG TAC CTAGTAA TGTTTTTATAATTTG MCAP_0463 554190 - 553687 - | hypothetical protein TERM 593 554247 - 554258 + r 71 -3 -5.65496 | TATTTTAAAGTTATT TGAT CATC ATCA TTTTTATTTTTAATA MCAP_0464 554677 - 554231 - | hypothetical protein pgi 555986 - 554703 - | glucose-6-phosphate isomerase TERM 594 555465 - 555477 + g 74 -4.9 -5.1383 | TTCTGCTAATTGTTT TAAAG CAC CTTTA TTTTTATCTGTTATT TERM 595 556121 - 556102 - R 74 -2.9 -5.90231 | ATAAATATAAAAAAA TCAACAG TTATAT CTATTGA TTTAAGTCTATTTAA pepO 558102 - 556207 - | endopeptidase O MCAP_0467 558685 - 558116 - | 5-formyltetrahydrofolate cyclo-ligase MCAP_0468 559115 - 558678 - | hypothetical protein MCAP_0469 560357 - 559119 - | aminotransferase, class V MCAP_0470 560551 - 563544 + | putative lipoprotein TERM 596 564748 - 564737 - g 73 -3 -5.77856 | opp_overlap 564737 AAGAAAGTAAAAAAA CATT AAAA AATG TATTTGACAAAATTA MCAP_0471 563566 - 565737 + | putative lipoprotein TERM 597 565962 - 565981 + G 77 -8 -4.07877 | opp_overlap 565962 TTATTAAAAGAAAAA TTAAATCC TGTA GGATTTAA TTATTTATCAAATGA TERM 598 565981 - 565962 - g 100 -8 -5.50723 | opp_overlap 565962 TTATTAAAAGAAAAA TTAAATCC TGTA GGATTTAA TTATTTATCAAATGA MCAP_0472 565740 - 566135 + | HIT family protein TERM 599 566155 - 566173 + T 100 -8.2 -5.59879 | opp_overlap 566155 TAATAATAAAAAAAA TAGAAGCT TGA GGCTTCTA TTTTTTATGTTTGTA TERM 600 566173 - 566155 - T 100 -7.5 -6.22691 | opp_overlap 566155 TAATAATAAAAAAAA TAGAAGC TTGAG GCTTCTA TTTTTTATGTTTGTA TERM 601 566181 - 566193 + T 70 -4.9 -4.87592 | GGCTTCTATTTTTTA TGTTT GTA AAACA TTTTATTATCTATAC MCAP_0473 567151 - 566171 - | hypothetical protein TERM 602 566794 - 566782 - G 70 -6.3 -4.23723 | TAATATTATTTAAAA GAGTT ATT AACTC TTGAAAGCTAGTTTT ung 567876 - 567220 - | uracil-DNA glycosylase TERM 603 567760 - 567776 + g 71 -6.7 -4.10407 | ATTTAAAACATCATC TTGTTTT GGA AAAACAA TTTCATTATTACTAT pmi 568798 - 567869 - | phosphomannose isomerase type I TERM 604 568101 - 568086 - G 70 -3.4 -5.4433 | opp_overlap 568086 ACATATAAAGAAAAA TATTTT GAAG AAAATA CTTTATTGTTTGCAT TERM 605 568898 - 568929 + r 71 -6.9 -3.90315 | opp_overlap 568898 568895 ACTAAATAACAATAA CAAATATTTAATG CTTTTT TATTAAATATTTG TTCTTAATATTTTAT TERM 606 568929 - 568898 - R 71 -6.2 -4.16937 | opp_overlap 568898, overlap 568895 ACTAAATAACAATAA CAAATATTTAAT GCTTTTTT ATTAAATATTTG TTCTTAATATTTTAT gid 570235 - 568919 - | tRNA (uracil-5-)-methyltransferase Gid TERM 607 569126 - 569136 + g 76 -2.6 -5.95946 | AATTGTTGTGTTTGG TAAA GGC TTTA TTTTTTTATTATTAA MCAP_0477 570911 - 570228 - | copper homeostasis protein CutC, putative metK 572065 - 570902 - | S-adenosylmethionine synthetase TERM 608 572108 - 572130 + r 70 -7.8 -3.55071 | opp_overlap 572108 572111 572114, overlap 572122 TAAAAAATTAAAAAA CCATAACAAT AAA ATTGTCATGG TTTAAGACAATCTCA TERM 609 572130 - 572108 - R 100 -10 -5.59502 | opp_overlap 572108 572122, overlap 572111 572114 TAAAAAATTAAAAAA CCATAACAAT AAA ATTGTCATGG TTTAAGACAATCTCA TERM 610 572151 - 572111 - R 75 -8.6 -3.48747 | opp_overlap 572108 572122 572138, overlap 572108 572114 AAAATTAAAAAACCA TAACAATAAAATTGTCAT GGTTT AAGACAATCTCATTGTTA GCTTAAAGCCCTTAT MCAP_0479 573049 - 572276 - | hypothetical protein p13 573378 - 573037 - | UPF0122 protein, putative ftsY 574636 - 573362 - | signal recognition particle-docking protein FtsY TERM 611 573663 - 573678 + g 77 -4.8 -5.37345 | GATTTTTCTACTTGT TGAATA ATTT TATTCA TTTTTTCTAATTCAG TERM 612 574380 - 574392 + g 70 -2.7 -5.51353 | overlap 574381 TGTTTTTCTTCTTTT TTAGT TTC ACTAG TTTTTGTTGTTTTTA MCAP_0482 575376 - 574705 - | phosphate transport system regulatory protein PhoU, putative pstB 576194 - 575385 - | phosphate ABC transporter, ATP-binding protein MCAP_0484 578277 - 576187 - | phosphate ABC transporter, permease, putative TERM 613 576359 - 576377 + g 72 -6.2 -4.50159 | overlap 576374 TTATAAAATTTTTTA TTTATAAA GTT TTTATAAA TTTGTTTAAATTCAA MCAP_0485 579492 - 578281 - | phosphate ABC transporter, phosphate-binding protein, putative TERM 614 579051 - 579069 + g 73 -2.5 -5.66338 | overlap 579057 579060 AAGTTTTATTATTTT GAAGTTT AGTAA AAATTTC TTTTTTATTATCTTT MCAP_0486 580017 - 579583 - | hypothetical protein TERM 615 580069 - 580036 - R 72 -8.5 -2.87012 | opp_overlap 580033, overlap 580033 580066 AACACCAATTAATTA TTTATTATTTTATTC TAAT GAATAAAAAAATAAA AACTTGGATTTCTCC TERM 616 580093 - 580066 - R 100 -8.6 -5.87996 | opp_overlap 580033 580072, overlap 580036 580033 580072 TAATGAATAAAAAAA TAAAAACTTGGA TTTC TCCAAGTTTATA ATCAATTGGTGCCCT TERM 617 580072 - 580087 + r 76 -7.6 -3.99405 | opp_overlap 580072 580066 ATAAAAAAATAAAAA CTTGGA TTTC TCCAAG TTTATAATCAATTGG TERM 618 580087 - 580072 - R 100 -7.6 -5.89659 | opp_overlap 580072, overlap 580066 ATAAAAAAATAAAAA CTTGGA TTTC TCCAAG TTTATAATCAATTGG TERM 619 580228 - 580213 - R 100 -6.2 -5.74122 | opp_overlap 580212 TATTATATAAAAAAA TATGAC AAAT GTCATA CTAGTATTATTTTAT rpmB 580443 - 580246 - | 50S ribosomal protein L28 MCAP_0489 580603 - 580932 + | hypothetical protein MCAP_0490 580962 - 582605 + | dihydroxyacetone kinase 2 domain-containing protein TERM 620 582618 - 582606 - f 76 -7.7 -3.99229 | opp_overlap 582606 ATAGCAATAGAATAA TCCCT AAC AGGGA TTTTTTAAAGGAGAA TERM 621 582606 - 582618 + F 86 -7.7 -5.00616 | opp_overlap 582606 ATAGCAATAGAATAA TCCCT AAC AGGGA TTTTTTAAAGGAGAA plsX 582637 - 583641 + | putative glycerol-3-phosphate acyltransferase PlsX MCAP_0492 583631 - 584329 + | ribonuclease III TERM 622 584332 - 584343 + F 89 -4.4 -6.15536 | opp_overlap 584327 584332 ATTAACTAATTAAAA GAAC GTGA GTTC TTTTTTTTATTACTT MCAP_0493 584513 - 584908 + | hypothetical protein MCAP_0494 584911 - 585297 + | hypothetical protein TERM 623 585507 - 585487 - f 72 -2.7 -5.75342 | GTTGTTTAAAAAAAA TAAATAAAA TTA TCTCATTTA AAGATTTATTTTTTA TERM 624 585859 - 585846 - g 79 -2.3 -6.00814 | opp_overlap 585850, overlap 585847 585850 AATAATGAAAAAAAA GCAGC TGAT GTTGC TGAAGTAACATTAGT TERM 625 585850 - 585873 + G 78 -6.8 -4.8083 | opp_overlap 585846 585847 585850 ATGAAAAAAAAGCAG CTGATGTTGC TGAA GTAACATTAG TTTTTAATAATATTC MCAP_0495 585624 - 588590 + | structural maintenance of chromosomes (SMC) superfamily protein TERM 626 588591 - 588636 + T 100 -13.1 -3.88396 | gap 1, opp_overlap 588591 588604, overlap 588604 AAAAACTTACACTAA TTAAATTA-AAAAATCCTTGGA AAT TCCAAGGATTTTTATTATTTAA TCTTTTGATTTGAAA TERM 627 588636 - 588591 - T 95 -13.1 -3.3287 | gap 1, opp_overlap 588591 588604, overlap 588604 AAAAACTTACACTAA TTAAATTA-AAAAATCCTTGGA AAT TCCAAGGATTTTTATTATTTAA TCTTTTGATTTGAAA TERM 628 588604 - 588622 + T 100 -11.8 -5.39905 | opp_overlap 588591 588604, overlap 588591 AATTAAATTAAAAAA TCCTTGGA AAT TCCAAGGA TTTTTATTATTTAAT TERM 629 588622 - 588604 - T 100 -11.8 -5.41359 | opp_overlap 588604 588591, overlap 588591 AATTAAATTAAAAAA TCCTTGGA AAT TCCAAGGA TTTTTATTATTTAAT MCAP_0496 590893 - 588629 - | RelA/SpoT family protein TERM 630 589243 - 589233 - G 75 -4 -5.49234 | opp_overlap 589233 ACATCTAATAAAAAA TCAT TTA ATGA ATTATAACCCATTGA TERM 631 590949 - 590931 - R 100 -6.1 -5.73339 | opp_overlap 590931 590925 ATAATTATAAAAAAA TAAAGAC TAAAT GTCTTTA TTTTTAATATTTTAT TERM 632 590931 - 590949 + r 81 -6.1 -4.99972 | opp_overlap 590931, overlap 590925 ATAATTATAAAAAAA TAAAGAC TAAAT GTCTTTA TTTTTAATATTTTAT apt 591465 - 590953 - | adenine phosphoribosyltransferase TERM 633 591477 - 591503 + r 77 -8.2 -4.07604 | opp_overlap 591484, overlap 591481 TCATATTCTGCCTTT CTAATCATTAAT TCC ATTAATGATTTG TTCTTCTTGATTTAT TERM 634 591481 - 591499 + r 81 -7.6 -4.58786 | opp_overlap 591484, overlap 591477 ATTCTGCCTTTCTAA TCATTAAT TCC ATTAATGA TTTGTTCTTCTTGAT MCAP_0498 595691 - 591477 - | hypothetical protein MCAP_0499 597304 - 595793 - | hypothetical protein TERM 635 595950 - 595966 + g 72 -3.7 -5.33848 | opp_overlap 595943 595950 595951, overlap 595951 GTATCTAATGAATAA CTTCAAG GAC CTTGAAC TTTTTTAGTTCTAAT TERM 636 595951 - 595965 + g 70 -7.2 -3.78682 | opp_overlap 595943 595951 595950, overlap 595950 TATCTAATGAATAAC TTCAAG GAC CTTGAA CTTTTTTAGTTCTAA MCAP_0500 598704 - 597343 - | DEAD-box ATP dependent DNA helicase TERM 637 598320 - 598338 + g 86 -4.6 -5.96219 | ATCTAGTTGGTGTTC CAATTACA ATA TGTGGTTG TTTTTTTTCTAGCTG MCAP_0501 599489 - 598713 - | hypothetical protein TERM 638 599119 - 599129 + g 73 -2.6 -5.64421 | opp_overlap 599119, overlap 599111 TATTTTTTAAAAGAA TTAA TTT TTAA TTTTTTATTTAAAAT MCAP_0502 600153 - 599476 - | hypothetical protein rpoD 601673 - 600156 - | RNA polymerase sigma factor RpoD dnaG 603490 - 601676 - | DNA primase glyS 604897 - 603527 - | glycyl-tRNA synthetase MCAP_0506 605710 - 604961 - | DNA repair protein RecO TERM 639 605477 - 605490 + g 75 -5.3 -5.00138 | ATGACTAAAACTATT GATCA ATTC TGATC TTTTTAATTTAGATA era 606615 - 605710 - | GTP-binding protein Era MCAP_0508 607112 - 606618 - | hypothetical protein MCAP_0509 609007 - 607118 - | peptidase C39 family protein TERM 640 608013 - 608025 + g 100 -7.7 -6.23317 | opp_overlap 608011 GTTAATAAATTTATA CTAGC TTT GCTAG TTTTTTTATTTTTAT TERM 641 608962 - 608989 + g 93 -10 -4.11484 | opp_overlap 608962 TCAGTTTAATAAAAA TCACCTCTCATA TATG TATTAGAGGTGA TTTTAAAAAATTAAC TERM 642 608989 - 608962 - G 100 -10 -5.08601 | opp_overlap 608962 TCAGTTTAATAAAAA TCACCTCTCATA TATG TATTAGAGGTGA TTTTAAAAAATTAAC MCAP_0510 609548 - 609000 - | DJ-1 family protein TERM 643 609576 - 609598 + r 70 -7.8 -3.52472 | opp_overlap 609569 609578, overlap 609572 609578 TTTAATTATACAAAA AAGAGTCTTT TAT AAAGACTCTA TTCATTTGAAACTGT TERM 644 609578 - 609596 + r 85 -10.4 -3.33419 | opp_overlap 609569 609578, overlap 609576 609572 TAATTATACAAAAAA GAGTCTTT TAT AAAGACTC TATTCATTTGAAACT TERM 645 609596 - 609578 - R 100 -10.4 -5.42131 | opp_overlap 609578 609576 609572, overlap 609569 TAATTATACAAAAAA GAGTCTTT TAT AAAGACTC TATTCATTTGAAACT MCAP_0511 614857 - 609596 - | hypothetical protein TERM 646 611530 - 611552 + g 82 -4.2 -5.65513 | opp_overlap 611530 ATTGATTATTTGAAA TACCAGTTAA AAC TAAATTGGTA TTTTTTTGATTAATA TERM 647 614640 - 614658 + g 72 -9 -2.66812 | opp_overlap 614640, overlap 614637 CTATCAGTTCTATAA GTTCTAAT TTC ATTAGAAC TACTATAGTCAAATT TERM 648 614658 - 614640 - G 77 -9 -3.31792 | opp_overlap 614640 614637 CTATCAGTTCTATAA GTTCTAAT TTC ATTAGAAC TACTATAGTCAAATT TERM 649 615379 - 615364 - H 78 -6.2 -4.74219 | ACAAATAAATTAAAA CAAGTA GCTT TACTTG AAAAAGATAAAAATA TERM 650 615466 - 615485 + H 82 -4.4 -5.86976 | overlap 615453 TTTAAAACTCTAAGT TTAATTTC TGCT GGAATTAA TTTTTTATTTTCTGG TERM 651 615740 - 615766 + H 76 -7.4 -4.07885 | opp_overlap 615740 AAGAGATTTTAGAAT TTTCATCTCAAA AAT TATGAGATGAGA TTTTACCAAAAGATA TERM 652 616090 - 616059 - H 73 -9 -2.56958 | overlap 616058 AAAAAAAATAATTAG CTTTTTAAAAAACA GTTT TGTTTTTGAAAAAG AAGATAAATATGGAT TERM 653 618257 - 618233 - g 76 -4.3 -5.32396 | overlap 618236 ACATCAAAAAGAAAA TGATCCAACTA CTT TAGTTTGAGCA GAATATAAAGGATAT MCAP_0513 617508 - 619751 + | putative lipoprotein TERM 654 620853 - 620842 - g 73 -4.4 -5.1166 | TAGTAAAACTAAAAA CTGT ATGT ACAG GATATGCTAAAGGTT MCAP_0514 619809 - 622079 + | putative lipoprotein TERM 655 622088 - 622115 + T 82 -2.8 -6.34616 | opp_overlap 622088 AAAATAAAAAAAATA GTTAGATTAATT TTTT AAAAAATCTAAC TTTTTTTTGTTTTCA MCAP_0515 623349 - 622111 - | recombination factor protein RarA TERM 656 622692 - 622715 + g 72 -4 -5.4492 | GAGCTGTTGGATTTT TTGAAACTGT TATA ATAGTTTTAA TTTTTTCTATGTCTA TERM 657 623418 - 623437 + r 79 -9.4 -3.33003 | opp_overlap 623418 GTTTAAAAATAAAAA CTCACAAT TTAA ATTGTGAG TTGATCATTATATTA TERM 658 623437 - 623418 - R 100 -9.4 -5.61881 | opp_overlap 623418 GTTTAAAAATAAAAA CTCACAAT TTAA ATTGTGAG TTGATCATTATATTA lon 625801 - 623462 - | ATP-dependent protease La TERM 659 624284 - 624294 + g 78 -5.4 -5.24449 | AGTTAAATAATCTTT TGCA ATA TGCA TTTTTTCAATTTCTG TERM 660 624693 - 624705 + g 83 -7.7 -4.60487 | opp_overlap 624692 GCTTCAGCAATTGAT CTAGC TAA GCTAG TTTTTCCAACTCCTG TERM 661 625906 - 625884 - R 95 -9.3 -5.24551 | opp_overlap 625880 625884, overlap 625874 CTAAATTAATAAAAA CTATCCTTT TTATT AAAGGATAG TTCAATTTTTTTATT TERM 662 625884 - 625906 + r 80 -9.3 -3.62012 | opp_overlap 625874 625884, overlap 625880 CTAAATTAATAAAAA CTATCCTTT TTATT AAAGGATAG TTCAATTTTTTTATT tig 627206 - 625920 - | trigger factor TERM 663 626121 - 626145 + g 77 -5.1 -5.37865 | opp_overlap 626121 ACTAACTACTAAAAA TGATTTAATTC TAT GAATTGCATCA TTTTTTAATTCTTCA MCAP_0518 627525 - 627223 - | hypothetical protein efp 628097 - 627543 - | translation elongation factor P fmt 629140 - 628187 - | methionyl-tRNA formyltransferase MCAP_0521 631274 - 629130 - | hypothetical protein TERM 664 631346 - 631332 - R 75 -2.8 -5.95286 | opp_overlap 631332 631339 ATTAAAAATAAAAAA GGCA TCATTAG TGCC TAAGTTAATTACTTT MCAP_0522 631968 - 631351 - | hypothetical protein TERM 665 631994 - 632006 + r 71 -3.5 -5.38326 | opp_overlap 631994 CTTTCTATAACAATA TAATT ATA AATTA TTTTTATTTAATTAC trmU 633137 - 632010 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 666 633233 - 633214 - R 82 -5 -5.65177 | opp_overlap 633215, overlap 633215 633223 AGATTTACAAAAAAA GCTCCTAA ATAT TTAGGAGT TAAATAGATATGTTT TERM 667 633215 - 633232 + r 73 -8.5 -3.09759 | opp_overlap 633215 633214 633223 GATTTACAAAAAAAG CTCCTAA ATAT TTAGGAG TTAAATAGATATGTT TERM 668 633232 - 633215 - R 80 -8.5 -3.9748 | opp_overlap 633215, overlap 633214 633223 GATTTACAAAAAAAG CTCCTAA ATAT TTAGGAG TTAAATAGATATGTT MCAP_0524 634117 - 633233 - | putative lipoprotein MCAP_0525 635542 - 634769 - | putative lipoprotein MCAP_0526 636367 - 635564 - | putative lipoprotein TERM 669 636593 - 636539 - R 73 -4 -5.34055 | opp_overlap 636539 636549 636554 636559 ATAAAGACTAAAAAA TAAGATTTACTAAAATAAACTAAAAA AGT TTTTTGTTTTATTTTAATCTATCTTA TTATCAACATCTTTA MCAP_0527 637225 - 636581 - | hypothetical protein MCAP_0528 637885 - 637250 - | MTA/SAH nucleosidase nadD 639011 - 637908 - | putative nicotinate-nucleotide adenylyltransferase TERM 670 638273 - 638291 + g 75 -4 -5.50723 | overlap 638275 GTTGTGGTAAATAAG TTTTTAAA TAA TTTAAAGA TTTTTCTTTTGATCA MCAP_0530 639274 - 639029 - | hypothetical protein MCAP_0531 640053 - 639292 - | NH3-dependent NAD+ synthetase obgE 641332 - 640031 - | GTPase ObgE TERM 671 640840 - 640812 - G 71 -6.8 -4.15222 | ATTGCTCTTAATAAA GTTGATTTTCCA GCATT TGGTAAACCAAC AAATCCAACATCAGC TERM 672 640940 - 640952 + g 70 -6.3 -4.19735 | TTTGTTTCTTGAATT TGCAA ATC TTGCA TTTCCTTTTCCACCC TERM 673 641017 - 641031 + g 86 -5.8 -5.69473 | opp_overlap 641016 TTTCATTAATATCAG CTAATA TAG TATTAG TTTTTTTATCATATA MCAP_0533 641711 - 641403 - | hypothetical protein MCAP_0534 642453 - 641701 - | hypothetical protein TERM 674 642493 - 642479 - R 100 -10 -5.79595 | opp_overlap 642479 TTCTAAAACAAAAAA TCGTGC TTA GCACGA TTTTAATGATTCTAA TERM 675 642479 - 642493 + r 89 -10 -4.37527 | opp_overlap 642479 TTCTAAAACAAAAAA TCGTGC TTA GCACGA TTTTAATGATTCTAA MCAP_0536 644245 - 642641 - | hypothetical protein MCAP_0537 646138 - 644285 - | ABC transporter, ATP-binding/permease protein, putative MCAP_0538 648027 - 646156 - | ABC transporter, ATP-binding/permease protein, putative TERM 676 648108 - 648090 - R 82 -5.3 -5.63236 | opp_overlap 648090 ATTTAAAAAGAAAAA GAGACCA AGTTA TAGTCTC TAGTTATTATTTAAT MCAP_0539 648548 - 648243 - | single-strand binding protein family MCAP_0540 648710 - 649948 + | YeeE/YedE family protein, putative MCAP_0541 649951 - 651747 + | hypothetical protein TERM 677 651749 - 651788 + T 100 -8 -5.66868 | opp_overlap 651752, overlap 651752 ATAATTTTGATTAAA AAAGCAAAGATTCTAGTT TTTT AACTAGTTTCTTTGCTTA TTTTTTTAATTGGTT TERM 678 651785 - 651752 - T 100 -9.7 -5.14965 | opp_overlap 651752 651749 ATTTTGATTAAAAAA GCAAAGATTCTAGTT TTTT AACTAGTTTCTTTGC TTATTTTTTTAATTG TERM 679 651752 - 651785 + T 93 -9.7 -4.88485 | opp_overlap 651752, overlap 651749 ATTTTGATTAAAAAA GCAAAGATTCTAGTT TTTT AACTAGTTTCTTTGC TTATTTTTTTAATTG MCAP_0542 652392 - 651769 - | ribonuclease HII, putative MCAP_0543 653336 - 652386 - | GTPase family protein TERM 680 653422 - 653387 - R 91 -5.8 -5.80003 | gap 1, opp_overlap 653386 653395 TCAATAAATAAAAAA CATCATAATAAAGTA GAAAAAT TACTTTAT-ATGATG ATTAAATTATTTGAT rplS 653821 - 653429 - | 50S ribosomal protein L19 trmD 654545 - 653823 - | tRNA (guanine-N1)-methyltransferase MCAP_0546 655041 - 654547 - | 16S rRNA processing protein RimM, putative rpsP 655385 - 655059 - | 30S ribosomal protein S16 TERM 681 655468 - 655443 - R 100 -11.3 -5.48303 | opp_overlap 655448 ACAATTTTAAAAAAA GGTGTCAAGTA ATTT TACTTAACACC TAAAATTATTTGTGG MCAP_0548 655941 - 655474 - | hypothetical protein ffh 657290 - 655947 - | signal recognition particle protein TERM 682 656351 - 656322 - G 79 -7.3 -4.69027 | opp_overlap 656322 AAATTGACCTAAAAA CATTCTATTCATA GTTT TTTGAATAGAACG TTCGTCAATATTTTC TERM 683 656644 - 656654 + g 71 -5.4 -4.61687 | opp_overlap 656644 ACAACTAATAAAATT TCAC TTG GTGA TGTTTTTTTCTTTAA TERM 684 656807 - 656824 + g 87 -7.1 -5.25803 | CTTGTTTTCCTTTTT CAAATAC TTGT GTATTTG TTTTTTGTCCAAGTT MCAP_0550 658849 - 657320 - | HDIG/HD/KH domain-containing protein TERM 685 658476 - 658492 + g 82 -5.3 -5.49579 | ATTAAATATTCTTCT TTTTTAT CTA ATAAAAA TTTTCTTTTTTCTAA TERM 686 658994 - 658983 - R 93 -5.8 -6.02919 | opp_overlap 658983 TTATAAACAAAAAAA GCAC ATTG GTGC TTTAAATTATTCTTT recA 659987 - 659001 - | recombinase A MCAP_0552 660627 - 660079 - | hypothetical protein TERM 687 660217 - 660232 + g 70 -6.2 -4.23723 | opp_overlap 660216 AACACCAATATAAGC TAAACC TACA GGTTTA TTTTCCATGCTATTA TERM 688 660294 - 660313 + g 70 -8 -3.38435 | opp_overlap 660312, overlap 660293 TATTTGTTTTTGTTA GCTTATAA GTTT TTATAAGC ATTTCTTTTGCACAC TERM 689 661032 - 661071 + H 93 -12.4 -3.30554 | opp_overlap 661042, overlap 661042 TAAAAAATGAATGTG TAGAAAAAAAGTCGCCTT AATT AAGGCGACTTTTTATTTG TTAATGGTTGCTTAA TERM 690 661042 - 661061 + H 100 -12.2 -5.48514 | opp_overlap 661042, overlap 661032 ATGTGTAGAAAAAAA GTCGCCTT AATT AAGGCGAC TTTTTATTTGTTAAT TERM 691 661061 - 661042 - H 100 -12.2 -5.61596 | opp_overlap 661032 661042 ATGTGTAGAAAAAAA GTCGCCTT AATT AAGGCGAC TTTTTATTTGTTAAT TERM 692 661609 - 661593 - g 82 -4.5 -5.68039 | opp_overlap 661603, overlap 661594 AAACTTAGAAAAAAA GTTTTAA AAA CTAAAAC TGATAAAAAGTTTTG MCAP_0554 661194 - 662042 + | hypothetical protein TERM 693 662258 - 662280 + F 72 -7.8 -3.57883 | ATGTATTTTTGTTGT GCTTGTTTTT TAA AAAAGCGAGC TTTAAAAAATATTGT MCAP_0556 663622 - 664455 + | C-5 cytosine-specific DNA methylase MCAP_0557 664567 - 665148 + | hypothetical protein TERM 694 665538 - 665524 - f 82 -7.2 -4.82212 | GAAATAAGAAACAAA TATACC TAA GGTATA GTCCACCTGTTTCAA MCAP_0558 665588 - 665737 + | hypothetical protein TERM 695 665986 - 665966 - f 79 -8.5 -3.82031 | TGAATTACTACTAAA TTCTAATTT TTA AAATTAGAA ATATGAAAGGGATTT TERM 696 667705 - 667695 - g 70 -4 -5.2112 | overlap 667702 AAGATTATTAAAAAA GAAA CTA TTTC AGAAAGTGAAAAAAA TERM 697 668028 - 668016 - g 70 -2.7 -5.56263 | overlap 668019 668020 ATTAGAAAAGAAAAA TTAGT TTT ACCAA AAGAAGTTCTTAAAG MCAP_0559 666111 - 668111 + | TraG/TraD family membrane protein MCAP_0560 668143 - 669558 + | hypothetical protein TERM 698 669554 - 669544 - f 75 -2.6 -5.92399 | GAAGAAAATAAAAAA TTAA GTT TTAA CTAGTAAAAAGGCAA TERM 699 669566 - 669578 + F 75 -6.3 -4.67943 | opp_overlap 669565 669566 TTAACTAGTAAAAAG GCAAA GTA TTTGC TTTTATATATTAAGA TERM 700 670135 - 670125 - g 72 -4 -5.28983 | GCTAAAAGACAAAAA TAGT AAT ACTA GAATAAATGCTAAAG MCAP_0561 669691 - 671172 + | putative lipoprotein MCAP_0562 671184 - 671384 + | hypothetical protein TERM 701 671415 - 671438 + F 91 -5.4 -5.81622 | opp_overlap 671415 671413 AGATAAAAGCAAATA CCAACTTA ACAAAAAA TAAGTTGG TTTTTTTGCTTTTAT MCAP_0563 671489 - 671815 + | hypothetical protein TERM 702 672938 - 672927 - g 76 -2.2 -5.9362 | CAAAAGATAAAAAAA GACT TAAG AGCC AACTTAAAAGTGGAA TERM 703 673197 - 673157 - g 86 -9.4 -3.95073 | gap 1, opp_overlap 673169 GGTGATATTGATAAA TCAGAATGAGAACTTAATC AAAT GATTAAGTT-TAATTCTGA CAAAATAAGAGTTAA TERM 704 673169 - 673186 + G 71 -7.1 -3.9941 | opp_overlap 673157 AAATCAGAATGAGAA CTTAATC AAAT GATTAAG TTTAATTCTGACAAA MCAP_0564 671819 - 673462 + | hypothetical protein MCAP_0565 673465 - 676302 + | hypothetical protein TERM 705 676800 - 676778 - g 89 -4.2 -6.01187 | AAGTAAACAAAAAAA TTGCTGATGT TAA AGATCAACAA AAAAAGTTCAAAGAT MCAP_0566 676321 - 676944 + | hypothetical protein TERM 706 678173 - 678159 - g 73 -7.2 -4.06055 | overlap 678154 ATGTTTTAAATCAAA GATTTG AAA CAAATC TAAATGATAATCGTA MCAP_0567 676937 - 680959 + | hypothetical protein TERM 707 681116 - 681096 - g 88 -8.4 -4.89009 | opp_overlap 681096 AGATTGAACCAAAAA CAACTCTT TTTAT AAGAGTTG TTTTTTTATATAATC TERM 708 681096 - 681116 + G 100 -8.4 -5.74122 | opp_overlap 681096 AGATTGAACCAAAAA CAACTCTT TTTAT AAGAGTTG TTTTTTTATATAATC MCAP_0568 681011 - 681991 + | hypothetical protein TERM 709 682008 - 682022 + F 100 -7.2 -5.61596 | opp_overlap 682002 682008 ATAATAGATTAAAAA GACTAT AAA ATAGTC TTTTTTTATACCAAT TERM 710 682022 - 682008 - f 82 -7.2 -4.88711 | opp_overlap 682008, overlap 682002 ATAATAGATTAAAAA GACTAT AAA ATAGTC TTTTTTTATACCAAT MCAP_0569 682175 - 682540 + | hypothetical protein TERM 711 682597 - 682547 - f 95 -10.9 -4.24283 | opp_overlap 682554 682555 682565, overlap 682553 682555 682565 AATGAATAGAAACAA TATAAATACATAAAAAAAGACTA TAAAG TAGTCTTTTTTTATGCTTGTATA ACATTTTTTAGGTAT TERM 712 682591 - 682553 - f 89 -9.9 -4.42743 | opp_overlap 682554 682555 682565, overlap 682547 682555 682565 TAGAAACAATATAAA TACATAAAAAAAGACTA TAAAG TAGTCTTTTTTTATGCT TGTATAACATTTTTT TERM 713 682554 - 682590 + F 91 -11.9 -3.55323 | opp_overlap 682553 682547 682555 682565, overlap 682555 682565 AGAAACAATATAAAT ACATAAAAAAAGACTAT AAA GTAGTCTTTTTTTATGC TTGTATAACATTTTT TERM 714 682589 - 682555 - f 100 -14.7 -3.79177 | opp_overlap 682555 682554 682565, overlap 682553 682547 682565 GAAACAATATAAATA CATAAAAAAAGACTA TAAAG TAGTCTTTTTTTATG CTTGTATAACATTTT TERM 715 682555 - 682589 + F 100 -15.4 -2.72109 | opp_overlap 682553 682547 682555 682565, overlap 682554 682565 GAAACAATATAAATA CATAAAAAAAGACTAT AAA GTAGTCTTTTTTTATG CTTGTATAACATTTT TERM 716 682579 - 682565 - f 78 -4.3 -5.82281 | opp_overlap 682565 682555 682554, overlap 682555 682553 682547 AAATACATAAAAAAA GACTA TAAAG TAGTC TTTTTTTATGCTTGT TERM 717 682565 - 682579 + F 84 -5 -5.73339 | opp_overlap 682555 682553 682547 682565, overlap 682555 682554 AAATACATAAAAAAA GACTAT AAA GTAGTC TTTTTTTATGCTTGT TERM 718 682690 - 682662 - f 71 -6.3 -4.28049 | opp_overlap 682662, overlap 682673 682678 ATAAATAAATAATAA TTATTTTAAAATA ATA TATTTTTAAATAA AAATAAACTAAAAAG MCAP_0570 682755 - 683672 + | hypothetical protein TERM 719 683732 - 683757 + F 100 -6.9 -5.60993 | gap 1 TAGAGCTAAGATGGG GCGGGTGCTGTT ATT AAT-GCACTCGC TTTTTTTATACAAAA TERM 720 684508 - 684491 - g 81 -5.6 -5.38326 | CTAAGCAAACAAAAA CCACTA AAAAAA TAGTGG TCAATGGTGATGGAG TERM 721 684950 - 684920 - g 90 -10 -3.66166 | opp_overlap 684926 684928, overlap 684928 CTTTTAAAAAACACA TTAAAAAAGAACAA TCT TTGTTCTGTTTTAA GAACATAAAGTCCAA TERM 722 684942 - 684928 - g 90 -7.2 -5.28755 | opp_overlap 684928 684926, overlap 684920 AAACACATTAAAAAA GAACAA TCT TTGTTC TGTTTTAAGAACATA MCAP_0571 683782 - 685014 + | hypothetical protein TERM 723 685071 - 685060 - T 71 -3 -5.66989 | opp_overlap 685060 685067 685068 685069, overlap 685069 TAAATAGCAAAAAAA TAGT CATA ACTA TATATTACATAGTAA TERM 724 685067 - 685095 + T 76 -4.7 -5.37593 | opp_overlap 685060 685069, overlap 685060 685068 685069 CAAAAAAATAGTCAT AACTATATATTAC ATA GTAATATATAGAG TTTTTTAATTTGACC TERM 725 685068 - 685094 + T 76 -8.2 -3.81472 | opp_overlap 685060 685069, overlap 685060 685067 685069 AAAAAAATAGTCATA ACTATATATTAC ATA GTAATATATAGA GTTTTTTAATTTGAC TERM 726 685069 - 685093 + T 86 -11.7 -2.87798 | opp_overlap 685060 685069, overlap 685060 685068 685067 AAAAAATAGTCATAA CTATATATTAC ATA GTAATATATAG AGTTTTTTAATTTGA TERM 727 685093 - 685069 - T 89 -11.7 -3.49898 | opp_overlap 685060 685069 685068 685067, overlap 685060 AAAAAATAGTCATAA CTATATATTAC ATA GTAATATATAG AGTTTTTTAATTTGA TERM 728 685177 - 685201 + T 95 -11.7 -4.07885 | opp_overlap 685176 685175 AGTTTTTAATCAATT TTACGTTATAT TAC ATATAACGTAA TTTTGCGCCCCGGTA TERM 729 685492 - 685478 - T 81 -4.3 -5.99154 | opp_overlap 685478 TAGTAAATAAAAAAA GATAG GTAAT CTATC TTAGTTTGTTTTTTA MCAP_0572 685865 - 685488 - | hypothetical protein MCAP_0573 685929 - 686438 + | recombination protein U, putative MCAP_0574 686946 - 686410 - | hypothetical protein TERM 730 686968 - 687000 + r 100 -13.7 -3.74526 | opp_overlap 686977, overlap 686971 686977 TTCCTTTATAAATGT TAATAAAAAGGTTGC TTT GCAACCTTTTTATAA TTATTACATTAATGA TERM 731 686971 - 686997 + r 100 -15.4 -2.96329 | opp_overlap 686977, overlap 686968 686977 CTTTATAAATGTTAA TAAAAAGGTTGC TTT GCAACCTTTTTA TAATTATTACATTAA TERM 732 686977 - 686991 + r 100 -10 -5.03945 | opp_overlap 686977, overlap 686971 686968 AAATGTTAATAAAAA GGTTGC TTT GCAACC TTTTTATAATTATTA TERM 733 686991 - 686977 - R 100 -10 -5.11112 | opp_overlap 686971 686968 686977 AAATGTTAATAAAAA GGTTGC TTT GCAACC TTTTTATAATTATTA hupA 687276 - 687004 - | DNA-binding protein HU 1 gpsA 688306 - 687308 - | glycerol-3-phosphate dehydrogenase (NAD(P)+) engA 689615 - 688308 - | GTP-binding protein EngA cmk 690283 - 689615 - | cytidylate kinase MCAP_0579 690987 - 690292 - | hypothetical protein TERM 734 690338 - 690324 - G 76 -2.2 -5.82036 | ATAATAAAGAAAAAA TCATTA CAC TAATAA AAATAGAAATTCAAA MCAP_0580 691943 - 691056 - | hypothetical protein ppa 692084 - 692644 + | inorganic pyrophosphatase TERM 735 692665 - 692688 + T 78 -4 -5.7946 | opp_overlap 692665 TAATATTTTAATGTA GATTACTT TTATAATT AAGTAATC TTTTTTTATTAAAAA TERM 736 692715 - 692732 + T 80 -8.5 -4.0174 | opp_overlap 692715 AAAATTATAAAAAAA TACTCCT TTAA AGGAGTA TTTGTAAATTATATT TERM 737 692732 - 692715 - T 100 -8.5 -5.77632 | opp_overlap 692715 AAAATTATAAAAAAA TACTCCT TTAA AGGAGTA TTTGTAAATTATATT MCAP_0582 693453 - 692752 - | hypothetical protein MCAP_0583 695775 - 693511 - | putative lipoprotein TERM 738 694206 - 694224 + g 75 -9 -3.27994 | overlap 694195 694221 GATGTGCTTTTTGAA TTCCATAA AAC TTATGGAA TTGATCTAGCATTAC TERM 739 695130 - 695144 + g 81 -7.2 -4.90266 | opp_overlap 695129 TAATTACAAAGTCAT CTGAAA TAG TTTCAG TTTTTACTTGATCAG MCAP_0584 695942 - 695820 - | putative lipoprotein MCAP_0585 696569 - 696234 - | putative lipoprotein MCAP_0586 698397 - 696604 - | ABC transporter permease TERM 740 697459 - 697483 + g 70 -7.3 -3.69301 | ATTTCCAGAAGGTTT TGAAAATAACT TCA AGTTCTTTTCA TTAATTATTATTTTT MCAP_0587 700279 - 698444 - | ABC transporter, ATP-binding protein, putative TERM 741 700421 - 700404 - R 100 -4.1 -7.14698 | overlap 700418 AAAAAAAAAAAAAAA CAAGCCT TTAG AAGCTCG TTAGCAAGTTCTTTA TERM 742 700459 - 700473 + r 81 -8.6 -4.30719 | opp_overlap 700459 TAAGTATAATAAAAA GCCTAT AAA ATAGGC TTTATTATAAAAAAA TERM 743 700473 - 700459 - R 95 -8.6 -5.24416 | opp_overlap 700459 TAAGTATAATAAAAA GCCTAT AAA ATAGGC TTTATTATAAAAAAA TERM 744 700537 - 700489 - R 82 -5 -5.67063 | opp_overlap 700481 700489 700533 700535, overlap 700492 700535 TTTATTATAAAAAAA GAATTTTTTAATTTTTTTTATT TTTTT ATTAAAAAAAATTAAAAAAGGC ATATTTTTATATGCC TERM 745 700534 - 700492 - R 93 -9.7 -4.9041 | opp_overlap 700481 700489 700533, overlap 700489 ATTATAAAAAAAGAA TTTTTTAATTTTTTTTATT TTTTT ATTAAAAAAAATTAAAAAA GGCATATTTTTATAT TERM 746 700535 - 700552 + r 74 -8.5 -3.26933 | opp_overlap 700489 700535, overlap 700489 700533 AAAAAAATTAAAAAA GGCATAT TTTT ATATGCC TATTAGTCTTAATAT TERM 747 700552 - 700535 - R 100 -8.5 -5.62552 | opp_overlap 700489 700535 700533, overlap 700489 AAAAAAATTAAAAAA GGCATAT TTTT ATATGCC TATTAGTCTTAATAT TERM 748 701459 - 701431 - R 100 -8.3 -5.46129 | TAACAAATGAAAAAA CCTTAAACTATAT TAA ATTTAGCTTAAGG TTAAACTATATAATA TERM 749 701460 - 701480 + r 75 -8.5 -3.5489 | opp_overlap 701465, overlap 701465 AAATTTAGCTTAAGG TTAAACTAT ATA ATAGTTTAA TTAGTTTAAAGTTGT MCAP_0589 702133 - 701486 - | ribulose-phosphate 3-epimerase, putative MCAP_0590 703941 - 702133 - | ascorbate-specific PTS system enzyme IIC/IIB TERM 750 702472 - 702511 + g 82 -11.2 -2.57092 | opp_overlap 702489 702492 702493, overlap 702468 TCTATTGTTATTATC TAGTTTTTTAACTAAA TTAATTTT TTTAGTTAAAAAACTA TAAATTGGTAAAATT TERM 751 703671 - 703647 - G 70 -5.9 -4.20084 | ATGACCCAGTTAAAA CTATTTTTGAA GTA TTTAAAAATAG ACCTGGTAAAACATC MCAP_0591 704402 - 703953 - | PTS system, IIA component, putative TERM 752 704532 - 704511 - R 100 -8.1 -5.38951 | AAGCTATATAAAAAA GAAAGGCTT TTTA AAACCTTTC ATCCCAAAATATTTA MCAP_0592 704795 - 704691 - | hypothetical protein TERM 753 704869 - 704849 - R 74 -7 -4.05583 | opp_overlap 704848 704849, overlap 704847 TTAATAGTAAAAAGA GAAAGATT TAATT AATCTTTC CTTTTATTGATATAT MCAP_0593 705830 - 704901 - | lipoprotein (VmcD) TERM 754 705928 - 705893 - R 75 -9.4 -2.78934 | opp_overlap 705897 705897 705897 705897 705897 705897 705897, overlap 705892 705896 705901 705903 CTATATAGCTGAAAT TCATTATATATATATA TATA TATATATATATAATGT CAAGCACTTAGCAGG TERM 755 705925 - 705896 - R 75 -9.7 -2.6583 | opp_overlap 705897 705897 705897 705897 705897 705897 705897, overlap 705893 705892 705901 705903 TATAGCTGAAATTCA TTATATATATATA TATA TATATATATATAA TGTCAAGCACTTAGC TERM 756 706078 - 706033 - R 100 -10.9 -5.7946 | overlap 706071 TTTTTAATAAAAAAA TCTTATTATCTATACTTAACC AACT GACTAAATATAAATAATAAGA TTAAAACTTAAACTA MCAP_0594 706662 - 706228 - | lipoprotein (VmcC) TERM 757 706762 - 706725 - R 100 -14.7 -5.24989 | opp_overlap 706721 706719 706728 706728 706728 706728 706728 706728 CTATATAGCAAAAAA CATTATATATATATATA TATA TATATATATATATAATG TCAATATATTATTGT TERM 758 706728 - 706757 + r 75 -9.7 -2.66559 | opp_overlap 706725, overlap 706728 706728 706721 706719 706728 706728 706728 TATAGCAAAAAACAT TATATATATATAT ATAT ATATATATATATA TAATGTCAATATATT TERM 759 706728 - 706755 + r 72 -8.8 -2.87026 | opp_overlap 706725, overlap 706728 706728 706728 706721 706719 706728 706728 TATAGCAAAAAACAT TATATATATATA TATA TATATATATATA TATAATGTCAATATA TERM 760 706947 - 706910 - R 86 -5.3 -6.01369 | gap 1, opp_overlap 706921 706923, overlap 706911 TAAACAATAAAAAAA CTTATTACTC-ATATAAA CAA TTTATATTAAGTAATAAA ATCTAAAAGAACTAG TERM 761 706946 - 706911 - R 73 -6.6 -4.17161 | gap 1, opp_overlap 706921 706923, overlap 706910 AAACAATAAAAAAAC TTATTACTC-ATATAAA CAA TTTATATTAAGTAATAA AATCTAAAAGAACTA TERM 762 707671 - 707643 - R 100 -9.1 -5.4756 | opp_overlap 707643 707645 707652 AATCCTAATAAAAAA GAGAATAATTTTT TAC AAAAAATATTCTC TTCACTAAAATCATA TERM 763 707643 - 707671 + r 75 -9.1 -3.07113 | opp_overlap 707643, overlap 707645 707652 AATCCTAATAAAAAA GAGAATAATTTTT TAC AAAAAATATTCTC TTCACTAAAATCATA MCAP_0595 708435 - 707728 - | lipoprotein (VmcB) TERM 764 708689 - 708644 - R 100 -13.1 -5.72616 | overlap 708682 ATCTATATAAAAAAA TCTTATTATCTATACTTAATC AACT GACTAAATATAAATAATAAGA TTAAAACTTAAACAA TERM 765 709130 - 709156 + r 81 -5.4 -5.20735 | opp_overlap 709126, overlap 709126 GTATAGATATATTTC TTTGAAAATATT CTT AGTATTTTTAAA TTTATTTTTTCTTAC TERM 766 709791 - 709824 + r 100 -14.1 -3.34455 | opp_overlap 709791, overlap 709786 CCTAATTCTAAAAAA TAGACTTCCTAGG TGTTTTAT CCTAGGAAGTCTA TTAAGTTTATCCTAC TERM 767 709824 - 709791 - R 100 -14.1 -5.09426 | opp_overlap 709791 709786 CCTAATTCTAAAAAA TAGACTTCCTAGG TGTTTTAT CCTAGGAAGTCTA TTAAGTTTATCCTAC MCAP_0596 711366 - 709888 - | lipoprotein (VmcA) TERM 768 711625 - 711580 - R 100 -13.1 -5.36441 | overlap 711618 TTTTTATATAAAAAA TCTTATTATCTATACTTAATC AACT GACTAAATATAAATAATAAGA TTAAAACTTAAACTA MCAP_0597 712460 - 711633 - | hypothetical protein TERM 769 712426 - 712409 - G 80 -3.5 -5.81622 | overlap 712420 ATAAAATTAAAAAAA TAGCTAA AGTA TTAACTA TTAAAAGTATGAAAT TERM 770 712566 - 712551 - R 95 -6.2 -5.63517 | TTTGTAAATAAAAAA GTTGTA TTTC TACAAC TCAGCATTGTGATAG MCAP_0598 713273 - 712560 - | hypothetical protein MCAP_0599 713902 - 713285 - | nucleoside kinase MCAP_0600 714671 - 713913 - | ribosomal large subunit pseudouridine synthase B TERM 771 714708 - 714689 - R 93 -7.2 -5.40072 | TTCTCCTTAAAAAAA CCAATAAC AAAA GTTACTGG GTGCATTTTTTATAT scpB 715374 - 714745 - | chromosomal segregation and condensation protein B scpA 716194 - 715358 - | chromosomal segregation and condensation protein A TERM 772 715666 - 715713 + g 72 -8.2 -3.23274 | gap 1, overlap 715669 715673 TTTGATAAATTTCAG TTTCTAATTCAAAATCAGTTTGA TAA TTAAG-TGATTTTGAATTAGTAA TTACATTATAAAAAA TERM 773 715669 - 715710 + g 80 -9.9 -2.80511 | gap 1, overlap 715666 715673 GATAAATTTCAGTTT CTAATTCAAAATCAGTTTGA TAA TTAAG-TGATTTTGAATTAG TAATTACATTATAAA TERM 774 716207 - 716237 + r 72 -7.9 -3.46955 | opp_overlap 716211, overlap 716211 CATCTTTTCTTTCTA TAAATTATTTGAA TTAAT TTCAAGTAATTTA TTAATGTCTTTGTTT MCAP_0603 716965 - 716204 - | hypothetical protein MCAP_0604 718476 - 716977 - | hypothetical protein TERM 775 717988 - 717961 - G 83 -7.9 -4.55759 | AAAACTAACAACAAA TCCAGCTTTTA TACTAC TAAAAACTGGA AATAATCTCTCATTA TERM 776 718756 - 718771 + r 73 -7.6 -3.8802 | opp_overlap 718756 CAAATTTATAAAAAA CTTGCA TTAA TGCAAG TTTAAATTCTATTTT TERM 777 718771 - 718756 - R 95 -7.6 -5.33866 | opp_overlap 718756 CAAATTTATAAAAAA CTTGCA TTAA TGCAAG TTTAAATTCTATTTT MCAP_0605 719183 - 718785 - | putative lipoprotein TERM 778 719254 - 719267 + r 72 -2.5 -5.86465 | opp_overlap 719254 719258, overlap 719258 ACAATGAAAATATAC TAATT ATAA AATTA TTTTTTTATATTATT MCAP_0606 720127 - 719333 - | alpha/beta fold family hydrolase MCAP_0607 722595 - 720139 - | putative lipoprotein TERM 779 720595 - 720618 + g 73 -7 -4.17477 | opp_overlap 720595 720594 AATATTAAATCAAAC TTTATTATTA GTAT TAATAATAAA TTTATAATCTTTTTT MCAP_0608 724239 - 722695 - | hypothetical protein TERM 780 724300 - 724283 - R 81 -4.2 -5.95946 | opp_overlap 724278 724283 TCAATAATAAAAAAA CAAGTA ATAAAA TACTTG TTTTATTTTGCTTTT TERM 781 724283 - 724300 + r 70 -4.2 -5.24291 | opp_overlap 724283, overlap 724278 TCAATAATAAAAAAA CAAGTA ATAAAA TACTTG TTTTATTTTGCTTTT MCAP_0609 724548 - 724303 - | hypothetical protein tkt 726534 - 724564 - | transketolase MCAP_0611 726736 - 726575 - | hypothetical protein TERM 782 726789 - 726800 + r 73 -4.4 -5.2189 | CCGAGTTTTATAGAT TGCT AATT AGCA TTTTTTAATAATTAG TERM 783 726858 - 726835 - R 100 -7.6 -5.93252 | opp_overlap 726835 CTTAAAAATAAAAAA CACTTTAACT TTTT AATTAAAGTG TTTATAGTAAAACTA MCAP_0612 727611 - 726871 - | hypothetical protein TERM 784 726899 - 726921 + g 90 -7.8 -5.04265 | opp_overlap 726899 GGAGTTATAACAGTA GTTTTACTAG AAT CTTGTAAAAC TTTTTGATCTTTTTT MCAP_0613 728981 - 727710 - | tRNA (uracil-5-)-methyltransferase Gid TERM 785 728597 - 728624 + g 93 -10.2 -3.95627 | opp_overlap 728602, overlap 728600 TTGCTATAATTGTTG GAATATTTAAAT CAAT ATTTAAATATTC TTGTTCTATAATTTT TERM 786 729212 - 729229 + H 100 -6.3 -5.75478 | opp_overlap 729202, overlap 729202 AAATAGAACTCTCTA GAGCTCT TAAT AGAGTTC TTTTTTTATATAATT TERM 787 729567 - 729551 - g 73 -5.3 -4.86902 | TAAACTAGAAGAAAA TATTAAA GAA TTTAATA AAATTACTAATAATA TERM 788 730358 - 730313 - g 70 -4.3 -4.97402 | opp_overlap 730307 730313, overlap 730307 730316 TAAAATTGATAAAAA TTATTCTAAATTAGAATCAAT AAAT ATTGATGATAATCAAGAATAA TTTTAATAATTTAGT MCAP_0614 729282 - 730358 + | hypothetical protein TERM 789 730502 - 730471 - T 74 -8.4 -3.24411 | gap 1, opp_overlap 730478 730500, overlap 730478 730495 ACTTGCTTAAATATA TAA-AAAATCTACTT TAA AAGTAGATTTTATTA AAACTTAAATAATTT TERM 790 730494 - 730478 - T 100 -8.1 -5.51046 | opp_overlap 730478, overlap 730471 TAAATATATAAAAAA TCTACTT TAA AAGTAGA TTTTATTAAAACTTA TERM 791 730478 - 730494 + T 82 -8.1 -4.65747 | opp_overlap 730478 730471 TAAATATATAAAAAA TCTACTT TAA AAGTAGA TTTTATTAAAACTTA MCAP_0615 730739 - 730500 - | hypothetical protein TERM 792 730843 - 730826 - R 79 -3.5 -5.92399 | TAATAAAATAAAAAA TTAAAGA AATA TCCTTAA GATTAAAAATAGGCT TERM 793 730952 - 730964 + r 89 -6.3 -5.38326 | opp_overlap 730951 CTTTATTAATTGAAC CTAGA ATT TCTAG TTTTTGTTTAATTAC MCAP_0616 731777 - 730932 - | fructose/tagatose bisphosphate aldolase, class II MCAP_0617 731978 - 732712 + | DeoR family transcriptional regulator TERM 794 732754 - 732739 - g 70 -2.6 -5.47964 | opp_overlap 732746 ACAAAACAACAAAAA CAACTA GCAT TAATTG AAGAAATTTTTATTA TERM 795 733026 - 733014 - g 72 -4.9 -4.99134 | ATTTGAAATTAAAAA TTCAT TAA ATGAA AATAATAAAAAAGTA TERM 796 733847 - 733834 - g 71 -8.1 -3.06686 | opp_overlap 733832 733831, overlap 733831 AGTGTAGATAAATCA GCAGC TATT GCTGC AGCTTTACCTGGAAT MCAP_0618 732721 - 734607 + | PTS system, IIBC components, putative MCAP_0619 734620 - 735561 + | 1-phosphofructokinase MCAP_0620 737490 - 735640 - | hypothetical protein TERM 797 737288 - 737309 + g 80 -3.1 -5.81412 | opp_overlap 737292 737295 TTAGCTAGTGATATT GAAATAATA TTAT TAATATTTC TTTTTTTTACATAAG MCAP_0621 738590 - 738045 - | hypothetical protein TERM 798 738335 - 738349 + g 73 -7.2 -4.05069 | opp_overlap 738331 738332 738335 TATAAAAAAATCCAA TACCAA CTA TTGGTA TTATCTTCTTTTTTC TERM 799 739473 - 739491 + H 82 -4.7 -5.74288 | GATTTTTTAATTGAT TAATTTG TTGTT CAAATTA TTTTTTATTATTTAT TERM 800 740025 - 740011 - H 71 -2.9 -5.54907 | TTTATAAAACAAAAA GTAAA CTAAT TTTAC AAATAAAGATATAAT TERM 801 740477 - 740499 + G 76 -9.4 -2.76313 | opp_overlap 740494 740497 GAAGATGATGTTGAT TTAGTATTTT TTA AAAATACTAA TAGTATTAAAATTAT MCAP_0622 740123 - 741652 + | hypothetical protein TERM 802 741693 - 741708 + F 79 -4.7 -5.68489 | opp_overlap 741693 AGCAAGTTATATAAA GAGCT TTAACT AGCTC TTTTTTATTGTTATA MCAP_0623 741987 - 743822 + | metallo-beta-lactamase superfamily protein TERM 803 744505 - 744487 - g 72 -4.7 -5.06816 | ATTTTTTAATAAAAA TTCAAAA GAACG TTTTGAA GGTAATACATTTACT MCAP_0624 743900 - 744853 + | hypothetical protein TERM 804 744885 - 744919 + F 100 -15.2 -4.99035 | opp_overlap 744885 TAAGTTTTTATCTAA CCCCATATTCTAGACT AAA AATCTAGAGTATGGGG TTTTTATATGACTAA TERM 805 744919 - 744885 - f 100 -15.2 -3.06133 | opp_overlap 744885 TAAGTTTTTATCTAA CCCCATATTCTAGACT AAA AATCTAGAGTATGGGG TTTTTATATGACTAA TERM 806 745286 - 745307 + F 73 -7.5 -3.79668 | TTATTTTATTTTCCA TTTAAACTA GTTC TAGTTTAAA TTTAATAAATTCAGT MCAP_0625 745896 - 747140 + | hypothetical protein TERM 807 747186 - 747223 + F 71 -3.7 -5.33124 | gap 1, opp_overlap 747190, overlap 747190 CTTTTTAAGTGATAT TAAT-GTAGTTAATCGTG TGC TATGAATAACTACTATTA TTTTATTTTCTTATT MCAP_0626 747406 - 748809 + | hypothetical protein TERM 808 749032 - 748998 - f 100 -14.6 -3.58533 | opp_overlap 748998 CCATAACTCCCTAAA CCCTATATTTCAGACT AAA AATCTAAAATATAGGG TTTTTATTTTTAAAA TERM 809 748998 - 749032 + F 100 -10.2 -5.61881 | opp_overlap 748998 CCATAACTCCCTAAA CCCTATATTTCAGACT AAA AATCTAAAATATAGGG TTTTTATTTTTAAAA TERM 810 749037 - 749064 + F 71 -3.8 -5.51078 | gap 1, opp_overlap 749051, overlap 749033 749038 749039 749056 AAAATATAGGGTTTT TA-TTTTTAAAAA GAT TTTTTAAAAAGTA TTTTATTTTTATTTT TERM 811 749039 - 749061 + F 70 -8 -3.1503 | opp_overlap 749051, overlap 749033 749038 749037 749056 AATATAGGGTTTTTA TTTTTAAAAA GAT TTTTTAAAAA GTATTTTATTTTTAT TERM 812 749056 - 749069 + F 75 -2.5 -5.94743 | opp_overlap 749051 749065, overlap 749039 749038 749037 749065 TTTAAAAAGATTTTT TAAAA AGTA TTTTA TTTTTATTTTTTTTA TERM 813 749208 - 749192 - g 76 -2.3 -5.85737 | ATATGAAGAAAAAAA CTTAAAT ATT ATTAAAG AATATTTTGATAATT MCAP_0627 749130 - 750881 + | hypothetical protein MCAP_0628 750894 - 751562 + | hypothetical protein TERM 814 751590 - 751569 - f 82 -10.3 -3.41807 | opp_overlap 751569 TTTAAATAAATTCAA CCTAAATCA ATTA TGATTTAGG TTTTTTATTTCTTTT TERM 815 751569 - 751590 + F 100 -10.3 -5.88476 | opp_overlap 751569 TTTAAATAAATTCAA CCTAAATCA ATTA TGATTTAGG TTTTTTATTTCTTTT MCAP_0629 751744 - 752391 + | lipoprotein (VmcE) TERM 816 752853 - 752843 - f 72 -2.6 -5.71638 | TAATAATTAAAAAAA TTAA TAT TTAA AGTAGTTTACATTTT TERM 817 753071 - 753040 - f 74 -6 -4.41616 | opp_overlap 753045, overlap 753045 ACTTTTTTAAATAAA TACAACCTAAATCA ATTA TGATTTAGGTTTTT TATTTCTTTTTATTA TERM 818 753066 - 753045 - f 88 -10.3 -4.02911 | opp_overlap 753045, overlap 753040 TTTAAATAAATACAA CCTAAATCA ATTA TGATTTAGG TTTTTTATTTCTTTT TERM 819 753045 - 753066 + F 100 -10.3 -5.88476 | opp_overlap 753045 753040 TTTAAATAAATACAA CCTAAATCA ATTA TGATTTAGG TTTTTTATTTCTTTT MCAP_0630 753218 - 753748 + | lipoprotein (VmcF) TERM 820 753785 - 753763 - T 100 -7.1 -6.01187 | opp_overlap 753763 AATTAAACAAAAAAA CTCACTTAT CTAAC ACAAGTGAG TTTTTTAATATCTAA TERM 821 753763 - 753785 + T 76 -4.9 -5.24989 | opp_overlap 753763 AATTAAACAAAAAAA CTCACTTAT CTAAC ACAAGTGAG TTTTTTAATATCTAA pgk 755032 - 753818 - | phosphoglycerate kinase TERM 822 754745 - 754759 + g 70 -2.9 -5.4833 | TTTTCCTCTAGTTTG GTTAA TAAAT TTAAC TTTTTTATTCAATAA TERM 823 755145 - 755099 - R 100 -12.1 -5.75822 | opp_overlap 755104 755136 CATAAATTAAAAAAA CAAAATCTAAACTTGTTATTA ATTAA TAATAAAAAGTTTAGATTTTA AATTTAATATTTTTT TERM 824 755104 - 755140 + r 87 -9.8 -4.38313 | opp_overlap 755099, overlap 755136 ATTAAAAAAACAAAA TCTAAACTTGTTATTA ATTAA TAATAAAAAGTTTAGA TTTTAAATTTAATAT gap 756176 - 755160 - | glyceraldehyde-3-phosphate dehydrogenase MCAP_0633 757204 - 756269 - | hypothetical protein MCAP_0634 758398 - 757214 - | hypothetical protein mutM 759380 - 758556 - | formamidopyrimidine-DNA glycosylase TERM 825 758884 - 758915 + g 70 -4.6 -5.0809 | CTAATAACATGTTGA TCTAGTAAAACTGT TTTA ATAGCTTTATTAGA TTTTTGTAATTTATT polA 762126 - 759391 - | DNA polymerase I TERM 826 760727 - 760744 + g 73 -2.7 -5.75945 | opp_overlap 760727 TATTTAGATTTAATA TCAAGAT CTAT ATCTGGA TTTTTTTTAACACCT dnaE 765095 - 762135 - | DNA-directed DNA polymerase III (polc) TERM 827 764892 - 764922 + g 70 -7.8 -3.38966 | opp_overlap 764902, overlap 764897 764902 764921 ATTTTCTTCAAGTTC TAATGTTAAACCAA TTA TTGGTTTTATATTA TTATCAATAGCTTTT TERM 828 764902 - 764912 + g 73 -5.4 -4.82162 | opp_overlap 764902, overlap 764897 764892 AGTTCTAATGTTAAA CCAA TTA TTGG TTTTATATTATTATC MCAP_0638 765267 - 767921 + | hypothetical protein tyrS 769254 - 768010 - | tyrosyl-tRNA synthetase MCAP_0640 770323 - 769262 - | nicotinate phosphoribosyltransferase MCAP_0641 770933 - 770301 - | methionyl/phenylalanyl tRNA synthetase domain-containing protein MCAP_0642 770984 - 771823 + | hypothetical protein TERM 829 771992 - 771982 - g 70 -2.6 -5.59655 | opp_overlap 771982 TAAATCAAGAAAAAA TTTT AGA AAAA GTTTCAGAAGGAATT MCAP_0643 771834 - 772685 + | degV family protein TERM 830 772677 - 772717 + T 85 -10.7 -3.28712 | opp_overlap 772683 772691, overlap 772681 772691 GGTTTTGTTGCAATT GAAGAATAAAAAAACTGGA ATT TCCAGTTTTTTTTTATTTC TTATGGCAGGAGAGA TERM 831 772681 - 772713 + T 79 -7.9 -4.30719 | opp_overlap 772683 772691, overlap 772677 772691 TTGTTGCAATTGAAG AATAAAAAAACTGGA ATT TCCAGTTTTTTTTTA TTTCTTATGGCAGGA TERM 832 772711 - 772683 - T 88 -10.5 -3.73068 | opp_overlap 772681 772677 772691, overlap 772691 GTTGCAATTGAAGAA TAAAAAAACTGGA ATT TCCAGTTTTTTTT TATTTCTTATGGCAG TERM 833 772703 - 772691 - T 100 -7.7 -5.95946 | opp_overlap 772681 772677 772691, overlap 772683 TGAAGAATAAAAAAA CTGGA ATT TCCAG TTTTTTTTTATTTCT TERM 834 772691 - 772703 + T 100 -7.7 -6.5058 | opp_overlap 772691 772683, overlap 772681 772677 TGAAGAATAAAAAAA CTGGA ATT TCCAG TTTTTTTTTATTTCT TERM 835 772805 - 772819 + T 80 -8.6 -4.06502 | opp_overlap 772805 TCTCCTATAAAAAAA TCACAC AAA GTGTGA TTTGCTTTCAAAATG TERM 836 772819 - 772805 - T 100 -8.6 -5.60993 | opp_overlap 772805 TCTCCTATAAAAAAA TCACAC AAA GTGTGA TTTGCTTTCAAAATG MCAP_0646 773449 - 772982 - | FUR family transcriptional regulator MCAP_0647 773672 - 773451 - | acyl carrier protein, putative MCAP_0648 774061 - 773693 - | putative lipoprotein TERM 837 773980 - 773968 - G 70 -3.5 -5.28481 | TATCTAATGAAAAAA TATTT GAA AAATA AATTGAAGCTATTGT MCAP_0649 775115 - 774048 - | hypothetical protein TERM 838 775185 - 775200 + r 81 -7.6 -4.67697 | opp_overlap 775185 AGTAAAAATAAAAAA CAACAC CTAA GTGTTG TTTGTTGTTTTCAAA TERM 839 775200 - 775185 - R 100 -7.6 -5.95286 | opp_overlap 775185 AGTAAAAATAAAAAA CAACAC CTAA GTGTTG TTTGTTGTTTTCAAA TERM 840 775362 - 775379 + r 79 -7.1 -4.60317 | opp_overlap 775362, overlap 775357 TTTTAATCTAAAAAA GTAGTTA AACT TAACTAC TTTTAATTATTGTAT TERM 841 775379 - 775362 - R 87 -7.1 -5.15969 | opp_overlap 775362 775357 TTTTAATCTAAAAAA GTAGTTA AACT TAACTAC TTTTAATTATTGTAT arcC 776351 - 775419 - | carbamate kinase TERM 842 776370 - 776384 + r 70 -4.4 -5.02074 | opp_overlap 776378 AACTTCTCCTTTCTC TAAAAA TTT TTTTTA TTTTTTAAAAAATAA TERM 843 776435 - 776400 - R 75 -6.3 -4.61482 | opp_overlap 776400 776398 776405 776410, overlap 776397 TTTTTTAAAAAATAA CCACTCATTATAAAA TGTTTT TATTTTAATGAGTGG TAGTTTATTAATAAA MCAP_0652 777564 - 776470 - | agmatine deiminase TERM 844 776787 - 776801 + g 70 -7.2 -3.69469 | CTTTAATTTTACGAC CTTTAG CAT CTAAAG TATTTGTTAAAATAT MCAP_0653 778989 - 777571 - | amino acid permease family protein TERM 845 778993 - 779008 + r 74 -3.4 -5.58051 | overlap 778980 TGTTTTAGACATATT TAAAAA TTAT TTTTTA TTTTATTTTTTGTTT argF 780108 - 779011 - | putrescine carbamoyltransferase TERM 846 779267 - 779304 + g 76 -4.2 -5.32565 | gap 1 TCTACATTTCTTGAA GCAGGTAAACAGTGCAT AAATA ATGC-TTGTTGTCCTGC TTTTTTCATTAGTTC TERM 847 780556 - 780540 - g 79 -8.1 -4.183 | opp_overlap 780542 TTAATTTTTAATAAA GATTGTT GAA AACAATC TCATAAGATTCAACC MCAP_0655 780339 - 781226 + | ABC transporter, ATP-binding protein MCAP_0656 781228 - 781992 + | ABC transporter permease TERM 848 781984 - 782034 + T 93 -10.8 -4.33182 | opp_overlap 781997, overlap 781997 ACTAAAAAAGATTTA GCATTATAAAAAAGAGAAGATTTA TTA TTAATCTTCTCTTTTTTATTGTTC TTGTTTTCTAGATGC TERM 849 782021 - 781997 - T 100 -8.7 -5.32882 | opp_overlap 781984 781997 TAGCATTATAAAAAA GAGAAGATTTA TTA TTAATCTTCTC TTTTTTATTGTTCTT TERM 850 781997 - 782021 + T 100 -8.7 -5.70522 | opp_overlap 781997, overlap 781984 TAGCATTATAAAAAA GAGAAGATTTA TTA TTAATCTTCTC TTTTTTATTGTTCTT MCAP_0657 782505 - 782026 - | hypothetical protein MCAP_0658 784154 - 782589 - | hypothetical protein TERM 851 783668 - 783684 + g 71 -8.1 -3.06133 | opp_overlap 783667 AATTTTCAACAAATT CTATAGT TTT ACTATAG TTAAATAAAACATTC TERM 852 783869 - 783898 + g 72 -8.1 -3.28637 | gap 1, opp_overlap 783852 783869 783868 783871 CAGTTAATTTATAAC CAGACTGA-TTAAT GGC GTTAACTCAGTCTG TTCATGATGTTGATC TERM 853 784217 - 784205 - R 76 -3.4 -5.79595 | opp_overlap 784205 TTGCAAAATAAAAAA GGTA TTTTC TACC TTTTTACTCAATTAC leuS 786635 - 784221 - | leucyl-tRNA synthetase TERM 854 785399 - 785413 + g 76 -2.2 -5.8187 | overlap 785400 AAAATAACCAATCTC TTAATT TAT AATTAG TTTTTTTCTTACCTA TERM 855 786752 - 786737 - R 100 -9 -6.31682 | AAAAGTAAAAAAAAA GACACC AATT GGTGTC AAAATTAATATTCAT TERM 856 786802 - 786818 + r 71 -8.7 -2.62396 | opp_overlap 786797 TTGAACCAACGACCT CTCCGTT ATC AGCGGAG TGCTCTAACCAGCTG MCAP_0661 789746 - 786903 - | putative lipoprotein TERM 857 787364 - 787379 + g 72 -6.2 -4.44461 | TATTTCATTTATATT GGTATT CAAA AATACC TTTTATAAAATTCTT TERM 858 789897 - 789880 - R 100 -8.5 -5.86609 | overlap 789887 TTAAAAAAATAAAAA GCAACAT TTTT ATGTTGC TTAAAAGAGATTAAC TERM 859 789927 - 789955 + r 86 -6.7 -5.23016 | overlap 789929 CGTTTTGAGTATTGA GGTGCTCTACGTG CTC CACGTAGACCATA TTTTTTACGTTCTTT TERM 860 789929 - 789953 + r 100 -11.5 -4.21792 | overlap 789927 TTTTGAGTATTGAGG TGCTCTACGTG CTC CACGTAGACCA TATTTTTTACGTTCT rpsI 790306 - 789908 - | 30S ribosomal protein S9 rplM 790761 - 790306 - | 50S ribosomal protein L13 TERM 861 790485 - 790499 + g 70 -2.8 -5.47218 | GATCTAGTTCTCTTT GAACTG AAA CACTTC TTTTTTTCAATCCAC MCAP_0664 795026 - 790881 - | hypothetical protein TERM 862 792506 - 792496 - G 71 -5.4 -4.71426 | TTTTTATTAATAAAA TCAG AAG CTGA AATATCTAAAAATTG TERM 863 792802 - 792778 - G 72 -5.9 -4.54727 | opp_overlap 792778 TCTTTTAAATCAAAA CTATTAATATA GTC TTTATTAATAG CTAAACCAATACTAT TERM 864 795139 - 795108 - R 71 -3 -5.62219 | opp_overlap 795075 795115 AATATAGTAAAAAAA CACCATTTTTGTTA CAAG TAACAAATTAGGTG ATTTATAAAAATTAT truA 795900 - 795151 - | tRNA pseudouridine synthase A TERM 865 795579 - 795537 - G 76 -6 -4.77438 | opp_overlap 795544, overlap 795563 795566 ACCGATTAGTAAAAA TATCAAATTTATGATCATTA ATA TAATAATTATAAATTTTATA ATCAACTTCTCTTAT MCAP_0666 796912 - 795902 - | cobalt ABC transporter, permease protein MCAP_0667 797794 - 796925 - | cobalt transporter ATP-binding subunit MCAP_0668 799047 - 797821 - | cobalt transporter ATP-binding subunit TERM 866 798218 - 798234 + g 70 -5.1 -4.79949 | CTTTGTTTTTGACCA CCACTTA AAT TTAGTGG TTCTTTTTTTAAAGC TERM 867 799146 - 799127 - R 74 -2.2 -6.04953 | opp_overlap 799127 ATAGAAATAAAAAAA TAAGGT ACAAAAAG ACCTTA TAATTTTGAGACTAG rplQ 799517 - 799158 - | 50S ribosomal protein L17 rpoA 800490 - 799537 - | DNA-directed RNA polymerase subunit alpha TERM 868 800151 - 800129 - G 83 -11.4 -2.64375 | overlap 800119 AAAACTTCTACACCA GCTGGTAATT CTA AATCACCAGC ATATACAGGACCTTG rpsK 800883 - 800494 - | 30S ribosomal protein S11 rpsM 801274 - 800909 - | 30S ribosomal protein S13 rpmJ 801425 - 801312 - | 50S ribosomal protein L36 infA 801719 - 801495 - | translation initiation factor IF-1 map 802486 - 801731 - | methionine aminopeptidase, type I adk 803127 - 802486 - | adenylate kinase secY 804704 - 803256 - | preprotein translocase subunit SecY rplO 805141 - 804704 - | 50S ribosomal protein L15 TERM 869 804787 - 804813 + g 70 -6 -4.21908 | overlap 804789 CTTTTACATCAACTT TTTTAGTTAATG TAC CATTAGCTAATA TTTTAACTAATACTG TERM 870 804789 - 804811 + g 76 -8.6 -3.70674 | overlap 804787 TTTACATCAACTTTT TTAGTTAATG TAC CATTAGCTAA TATTTTAACTAATAC rpsE 805925 - 805161 - | 30S ribosomal protein S5 rplR 806294 - 805944 - | 50S ribosomal protein L18 TERM 871 805969 - 805985 + g 77 -5.2 -5.2853 | overlap 805964 AATCCATTTTCTCTT GCTTTT TGAGC AAAAGC TTTTATTTTTCCATG rplF 806862 - 806320 - | 50S ribosomal protein L6 rpsH 807265 - 806876 - | 30S ribosomal protein S8 rpsN 807472 - 807287 - | 30S ribosomal protein S14 rplE 808033 - 807491 - | 50S ribosomal protein L5 rplX 808378 - 808052 - | 50S ribosomal protein L24 rplN 808760 - 808392 - | 50S ribosomal protein L14 rpsQ 809033 - 808776 - | 30S ribosomal protein S17 rpmC 809449 - 809033 - | 50S ribosomal protein L29 rplP 809862 - 809449 - | 50S ribosomal protein L16 rpsC 810566 - 809865 - | 30S ribosomal protein S3 TERM 872 810127 - 810137 + g 78 -5.4 -5.1675 | ATTCCTTTAGCTCCA GCTT TTA AAGC TTTTTTAATAGCTAA TERM 873 810259 - 810269 + g 76 -2.6 -5.93252 | opp_overlap 810259 TCAATAACTCTAACA TTAA CAA TTAA TTTTTTATTTTTAAC rplV 810919 - 810584 - | 50S ribosomal protein L22 rpsS 811209 - 810943 - | 30S ribosomal protein S19 rplB 812076 - 811231 - | 50S ribosomal protein L2 rplW 812413 - 812129 - | 50S ribosomal protein L23 TERM 874 812373 - 812386 + g 73 -3.1 -5.58074 | overlap 812374 CCAGCAAATGATTTT TCAGT TAAT ACTGG TTTTTTTAATACTTC rplD 813039 - 812413 - | 50S ribosomal protein L4 TERM 875 812537 - 812559 + g 73 -3.5 -5.54907 | CCAGTAATATTATTT GAAGATTTA ACTAC TAATTCTTC TTTTTCTTTTGTAAC rplC 813723 - 813052 - | 50S ribosomal protein L3 rpsJ 814106 - 813798 - | 30S ribosomal protein S10 TERM 876 814335 - 814317 - R 100 -9 -6.04324 | opp_overlap 814317 CTAAAAAACAAAAAA TTACATCA AAT TGATGTAA TTCTAACATTATATT TERM 877 814317 - 814335 + r 78 -9 -3.39407 | opp_overlap 814317 CTAAAAAACAAAAAA TTACATCA AAT TGATGTAA TTCTAACATTATATT MCAP_0698 815400 - 814402 - | dihydroxyacetone kinase family protein TERM 878 815806 - 815828 + G 70 -4.2 -5.055 | ATTGGTTATATGCTT TATGTAAATG TTA CAATTGCATA TTTTTTCCCACTTCC MCAP_0699 815710 - 816549 + | hypothetical protein TERM 879 816591 - 816608 + T 82 -4.9 -5.63236 | opp_overlap 816586 816591 TAATATATGATAAAA GTAAGTT TTAA AGCTTAC TTTTTATTTTTAGCT TERM 880 816659 - 816641 - T 100 -10.4 -6.14618 | opp_overlap 816641 816644 TATAAAACAAAAAAA GAAGATCA AAA TGATCTTC TTAAATTATATAAAT TERM 881 816641 - 816659 + T 85 -10.4 -3.26717 | opp_overlap 816641, overlap 816644 TATAAAACAAAAAAA GAAGATCA AAA TGATCTTC TTAAATTATATAAAT TERM 882 816782 - 816767 - T 91 -9 -4.85782 | opp_overlap 816766 TTGTTTAAAAATAAA GAGCAC TATA GTGCTC GAATTTTCTAATGGT MCAP_0704 818425 - 817226 - | putative lipoprotein TERM 883 817841 - 817865 + g 71 -7.3 -3.94974 | opp_overlap 817841 817850, overlap 817837 TTTATCATTTTCAAA TTCTTTAAATG ATT CTTTTAAAGAA TTAATTTTTATTGGT TERM 884 818078 - 818062 - G 70 -5.1 -4.7871 | opp_overlap 818062 818071 AAGCATTACCAAAAA CTCTGAT TTT AACAGAG TTATTATTACTATTA TERM 885 818535 - 818520 - R 100 -6.2 -6.01725 | opp_overlap 818520 AATAAAAATAAAAAA TAAGCA AAAT TGCTTA TTTTAGTAATAAATT TERM 886 818520 - 818535 + r 71 -6.2 -4.31692 | opp_overlap 818520 AATAAAAATAAAAAA TAAGCA AAAT TGCTTA TTTTAGTAATAAATT MCAP_0705 819233 - 818538 - | hypothetical protein folD 820092 - 819238 - | methylene-tetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase MCAP_0707 821702 - 820101 - | TrkH family potassium uptake protein , putative TERM 887 820540 - 820514 - G 72 -6 -4.4017 | opp_overlap 820514 820520, overlap 820520 TTAATGTTGATAAAA TTAAAACTCCAA AAG TTGTAGTTCTAA TTCCTCCAGCTGTTG TERM 888 820828 - 820855 + g 73 -2.9 -5.74086 | opp_overlap 820809 820827 820828 820832, overlap 820832 AAATAAACTCAAAAG TTAATTTTAGT AAATAA ACTAAAACTAA TTTTTTCTTTAGTTT TERM 889 822406 - 822429 + G 73 -7.6 -3.77553 | opp_overlap 822406 AAGAAGGAGATCATA TTGTAGTTTT TGCA AGAACTACAA TTATTAATAGTCTTG MCAP_0708 821781 - 822509 + | TrkA family potassium uptake protein , putative TERM 890 822537 - 822512 - T 84 -7.7 -4.78753 | opp_overlap 822518, overlap 822518 TCAAGATCAATAAAA TAAAAATGGAC ATAA GTCCATTTTTT TATCTTTATTATAAG TERM 891 822531 - 822518 - T 100 -6.7 -5.62288 | opp_overlap 822518, overlap 822512 TCAATAAAATAAAAA TGGAC ATAA GTCCA TTTTTTTATCTTTAT TERM 892 822518 - 822531 + T 100 -6.7 -5.90231 | opp_overlap 822518 822512 TCAATAAAATAAAAA TGGAC ATAA GTCCA TTTTTTTATCTTTAT gatB 823985 - 822546 - | aspartyl/glutamyl-tRNA amidotransferase subunit B gatA 825444 - 823987 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 825740 - 825444 - | glutamyl-tRNA(Gln) amidotransferase, C subunit, TERM 893 825590 - 825580 - G 73 -5.4 -4.87786 | overlap 825581 TTAATTGTATAAAAA GTTG GTT CAAC TCCAGTTGTATCAAT ligA 827748 - 825742 - | DNA ligase, NAD-dependent MCAP_0713 829752 - 827752 - | hypothetical protein TERM 894 827934 - 827946 + g 72 -4.9 -5.0917 | CAATTTTTATACCTT CTTTT TCA AAAAG TTTCTTTTTTGCTAA TERM 895 829527 - 829511 - G 71 -7.3 -3.88985 | overlap 829500 AAAACTGTTGATAAA GCTAAAG CTC CTTCAGC AGTTCCACCAATTAT MCAP_0714 830663 - 829755 - | ribosomal large subunit pseudouridine synthase A MCAP_0715 831676 - 830666 - | CAAX amino terminal protease family protein, putative TERM 896 831109 - 831099 - G 86 -5.4 -5.64274 | overlap 831103 831106 831107 TTACCTACAAAAAAA GCAA CAA TTGC AAAAGCAATTGCAAT TERM 897 831120 - 831103 - G 79 -8.5 -4.08806 | overlap 831099 831106 831107 CTACAAAAAAAGCAA CAATTGC AAAA GCAATTG CAATGGGTATTAAAA TERM 898 831721 - 831707 - R 77 -5.7 -5.12172 | opp_overlap 831707, overlap 831702 TATTAATAAAGAAAA CAACC TAAAT GGTTG TTTTTAAATTAAATT TERM 899 831707 - 831721 + r 74 -5.7 -4.75776 | opp_overlap 831707 831702 TATTAATAAAGAAAA CAACC TAAAT GGTTG TTTTTAAATTAAATT ptsH 832004 - 831735 - | phosphocarrier protein HPr pcrA 834238 - 832070 - | ATP-dependent DNA helicase pcrA MCAP_0718 834996 - 834250 - | hypothetical protein MCAP_0719 835952 - 834996 - | glycosyl transferase, group 2 family protein TERM 900 835077 - 835089 + g 77 -3.5 -5.75342 | overlap 835072 AGGATCTTTATTTTC TAAAA AGA TTTTA TTTTTTTTAACAAAA TERM 901 835128 - 835148 + g 70 -3.3 -5.36441 | overlap 835129 TTTGTTTTTTACTTT ACTTTGAGT AAA ATTCAAAGC TTTTTTATATAAAAC TERM 902 836037 - 836009 - R 79 -4.8 -5.54079 | opp_overlap 836002 836001 836009 836034 TTAAAAATTAAAAAA TGAAACTTAT TTTTTAGTT ATAAGTTTCA TTTTTTAATGAGTGT TERM 903 836009 - 836037 + r 73 -4.8 -5.17353 | opp_overlap 836009, overlap 836002 836001 836034 TTAAAAATTAAAAAA TGAAACTTAT TTTTTAGTT ATAAGTTTCA TTTTTTAATGAGTGT MCAP_0720 837283 - 836066 - | putative lipoprotein TERM 904 837329 - 837310 - R 76 -3.6 -5.79595 | overlap 837312 CTTTAAAACAAAAAA TACGAATC TAAA AATTCGCA AATATATCAATATAA MCAP_0721 838655 - 837411 - | putative lipoprotein TERM 905 838701 - 838682 - R 76 -3.6 -5.79595 | overlap 838684 CTTTAAAACAAAAAA TACGAATC TAAA AATTCGCA AATATATCAATATAA MCAP_0722 839688 - 838759 - | peptide methionine sulfoxide reductase msrA/msrB TERM 906 839174 - 839190 + g 71 -6.7 -4.18443 | AAACTTAATTCTTTT CTTATTA ACT TAATAAG TTCTTGTTCTTTATC TERM 907 839757 - 839809 + r 78 -7.6 -4.29977 | gap 1, opp_overlap 839763 839774, overlap 839768 839774 ATTTATAAACTTTAA TTAAAATAATAA-AAAAACAAATCT TAAA AGATTTGTTTTTCTGATTATTATAA TTTGTTAACTTCTTT TERM 908 839803 - 839763 - R 85 -8.8 -4.43911 | gap 1, opp_overlap 839757 839768 839774, overlap 839774 AAACTTTAATTAAAA TAAT-AAAAAAACAAATCT TAAA AGATTTGTTTTTCTGATTA TTATAATTTGTTAAC TERM 909 839768 - 839797 + r 70 -8.1 -3.01676 | opp_overlap 839763 839774, overlap 839757 839774 TTAATTAAAATAATA AAAAAACAAATCT TAAA AGATTTGTTTTTC TGATTATTATAATTT TERM 910 839774 - 839791 + r 84 -7.1 -5.03945 | opp_overlap 839763 839774, overlap 839768 839757 AAAATAATAAAAAAA CAAATCT TAAA AGATTTG TTTTTCTGATTATTA TERM 911 839791 - 839774 - R 100 -7.1 -6.04419 | opp_overlap 839774 839768 839757, overlap 839763 AAAATAATAAAAAAA CAAATCT TAAA AGATTTG TTTTTCTGATTATTA MCAP_0723 842017 - 839804 - | putative lipoprotein TERM 912 839875 - 839887 + g 72 -6.3 -4.42765 | TATACATTAGATTTG GGTTA GCA TAACC TTTAGTTTTTTCAAA TERM 913 841091 - 841106 + g 83 -7.6 -4.66833 | opp_overlap 841083 AACTCAAGTTGTAAC TCCTAC TTCA GTAGGA TTTTTAACATTAGCA TERM 914 841371 - 841385 + g 78 -5.8 -5.10497 | TCTTTTGTTTTAGCA GAAAAA TTA TTTTTC TTTTTTAACTCAGTT MCAP_0724 842931 - 842026 - | hypothetical protein TERM 915 842903 - 842893 - G 78 -5.4 -5.14563 | opp_overlap 842893 TGTTGGATTAAAAAA CGTT CTT AACG CTTCTCCTGGTGTGT TERM 916 843048 - 843029 - R 100 -10.8 -5.60556 | opp_overlap 843029 843027 843023 843033 AATAGAAAATAAAAA GCAATAGC TGTT GCTATTGC TATACATTATCTAAA MCAP_0725 844337 - 843048 - | hypothetical protein MCAP_0726 845593 - 844625 - | hypothetical protein TERM 917 845737 - 845766 + r 78 -5.9 -4.79756 | gap 1, opp_overlap 845737, overlap 845764 AACAATAGTAAAAAA TTCCCTT-GATTAT TTA AAAATCTAAGGGAA TTTTTAAATTCTATA TERM 918 845766 - 845737 - R 84 -5.9 -5.31545 | gap 1, opp_overlap 845737 845764 AACAATAGTAAAAAA TTCCCTT-GATTAT TTA AAAATCTAAGGGAA TTTTTAAATTCTATA MCAP_0727 848155 - 845783 - | putative lipoprotein TERM 919 846307 - 846324 + g 70 -4.2 -4.98061 | overlap 846303 TTGGAGTTAGTGTTG GAACAA CTTGAA TTGTTC TTTTATTTCCTCTAT MCAP_0728 849066 - 848167 - | hypothetical protein TERM 920 849044 - 849034 - G 75 -5.4 -5.09225 | opp_overlap 849022 AGTTGAGTTAAAAAA CGTT CTT AACG CATTTCTTGGCTGAT TERM 921 849109 - 849130 + r 76 -4.6 -5.3236 | opp_overlap 849109 TTTAAACATAAAAAA TTTTATTG AAACAA CAATAAAA TTTTTTCTAGGTTAT TERM 922 849130 - 849109 - R 79 -4.6 -5.56264 | opp_overlap 849109 TTTAAACATAAAAAA TTTTATTG AAACAA CAATAAAA TTTTTTCTAGGTTAT MCAP_0729 850913 - 849165 - | ABC transporter permease protein p69 MCAP_0730 851626 - 850877 - | ABC transporter, ATP-binding protein MCAP_0731 853087 - 851627 - | ABC transporter, substrate-binding protein TERM 923 853136 - 853118 - R 84 -9 -4.26634 | overlap 853123 AAAATAAGGGGAAAA TAAAAGGT TAT ACCTTTTA AAGGGCATAACCTGT TERM 924 853148 - 853123 - R 84 -6.9 -5.10163 | overlap 853118 AAGGGGAAAATAAAA GGTTATACCTT TTAA AGGGCATAACC TGTAAAAAATCTCTA MCAP_0732 854183 - 853320 - | Cof-like hydrolase MCAP_0733 854317 - 855510 + | aminotransferase, classes I and II, putative MCAP_0734 855520 - 855921 + | endoribonuclease L-PSP, putative MCAP_0735 857209 - 855962 - | hypothetical protein MCAP_0736 858684 - 857413 - | hypothetical protein TERM 925 858886 - 858857 - R 74 -3 -5.72254 | gap 1, opp_overlap 858857, overlap 858843 TTAAATAATAAAAAA TGCAGA-TTATCT TAATT AGATAGTTCTGCA CTTTATTATTTTTTA MCAP_0737 860133 - 858892 - | hypothetical protein TERM 926 860320 - 860349 + r 73 -5.2 -5.04265 | gap 1, opp_overlap 860320 AATAGATACTAAAAA TGCAG-ATTATCT TAACT AGATAGTTCTGCA TTTTTCCTATTTTTT MCAP_0738 861696 - 860356 - | hypothetical protein TERM 927 860442 - 860464 + g 86 -9.4 -3.94465 | opp_overlap 860445 860447, overlap 860440 860445 TTTTATCTATTGATT TAACATAAAA ATC TTTTATGTTA TCTTTTGATTTTAAA TERM 928 860445 - 860461 + g 71 -6.7 -4.06527 | opp_overlap 860445 860447, overlap 860442 860440 TATCTATTGATTTAA CATAAAA ATC TTTTATG TTATCTTTTGATTTT MCAP_0739 861836 - 862984 + | hypothetical protein TERM 929 863605 - 863589 - f 71 -8.7 -2.62396 | opp_overlap 863584 CAGTTGGTTAGAGCA TCCGGCT CAT AACCGGA CGGTCATTGGTTCAA TERM 930 863732 - 863722 - f 71 -6.8 -4.07885 | overlap 863709 GATCGGTCTTGAAAA CCGA GAG TCGG GGAAACCCGAGCGGG TERM 931 864051 - 864066 + F 100 -7.6 -6.23317 | opp_overlap 864051 AAATTAAAAAATCCA GTAGTC ATAA GACTAC TTTTTTTATTTTTAT nagB1 864129 - 864857 + | glucosamine-6-phosphate isomerase TERM 932 864857 - 864871 + F 100 -8.6 -5.5074 | opp_overlap 864840 864854 864855 AACTAAAAACTATTA GCTAAC TAA GTTAGC TTTTTTATTACCTTG tpiA 864962 - 865708 + | triosephosphate isomerase MCAP_0751 865701 - 866537 + | HAD family hydrolase gpmI 866540 - 868135 + | phosphoglyceromutase TERM 933 868146 - 868168 + F 100 -8.4 -5.62288 | opp_overlap 868139 868145 868146 ATTAAAAGTCAAAAG GCTATCCCTT TCA AAGGGTTGGC TTTTTATTTTCTTAA MCAP_0753 868232 - 868831 + | hypothetical protein TERM 934 868972 - 868993 + G 71 -6.7 -4.07568 | opp_overlap 868972 ATATTTTTAATCAAA GTAAATGAT CAAT GTCATTTAC TTTTAAAGGAGGAAC TERM 935 869152 - 869136 - g 71 -5.3 -4.6951 | overlap 869132 AGTAGTCAAAATAAA TTTAATT TAG AATTAAA TGAAAAAGTAGTAAC MCAP_0754 868833 - 869831 + | hypothetical protein deoC 870565 - 869897 - | deoxyribose-phosphate aldolase MCAP_0756 872259 - 870577 - | phosphoglucomutase/phosphomannomutase deoA 872424 - 873737 + | pyrimidine-nucleoside phosphorylase TERM 936 873771 - 873754 - T 76 -7.1 -4.17523 | opp_overlap 873754 AAATAATGTTTAAAA TCCTATT AATA AATAGGA TTTTTTTGTTAAATT TERM 937 873754 - 873771 + T 100 -7.1 -5.83226 | opp_overlap 873754 AAATAATGTTTAAAA TCCTATT AATA AATAGGA TTTTTTTGTTAAATT TERM 938 873797 - 873826 + T 75 -8.9 -3.09438 | gap 1, opp_overlap 873797 873804, overlap 873799 873804 AAATTTTTAATTATA TAA-AAAAGCTCTT TTT AAGAGCTTTTATTA ATTTATAGTTATTTG TERM 939 873826 - 873797 - T 74 -8.9 -2.91467 | gap 1, opp_overlap 873797 873799 873804, overlap 873804 AAATTTTTAATTATA TAA-AAAAGCTCTT TTT AAGAGCTTTTATTA ATTTATAGTTATTTG TERM 940 873799 - 873823 + T 77 -8.7 -3.66017 | opp_overlap 873797 873804, overlap 873797 873804 ATTTTTAATTATATA AAAAAGCTCTT TTT AAGAGCTTTTA TTAATTTATAGTTAT TERM 941 873818 - 873804 - T 100 -8.6 -5.42131 | opp_overlap 873799 873797 873804, overlap 873797 TAATTATATAAAAAA GCTCTT TTT AAGAGC TTTTATTAATTTATA TERM 942 873804 - 873818 + T 90 -8.6 -4.87052 | opp_overlap 873804 873797, overlap 873799 873797 TAATTATATAAAAAA GCTCTT TTT AAGAGC TTTTATTAATTTATA MCAP_0758 875980 - 873824 - | putative lipoprotein TERM 943 873937 - 873947 + g 78 -5.4 -5.1356 | TACTAATAATACTTT CTCA TTG TGAG TTTTTATTAATAACA TERM 944 875091 - 875103 + g 74 -6.3 -4.67982 | CCTTTAGCATATCCT GTACA TAC TGTAC TTTTATTAACTAAAG TERM 945 875759 - 875745 - G 73 -4.4 -5.1356 | opp_overlap 875745 GTTGATGAAGAAAAA TTTAAA GAA TTTAAA ATTTCATTATTTTTA TERM 946 876075 - 876058 - H 100 -9.9 -6.17033 | opp_overlap 876057 876056 AAAAAAAATAAAAAA GGCTTAG TCAA CTAAGCC AGATTATTTTTCTTA TERM 947 876597 - 876613 + H 75 -2.4 -5.97979 | TTTAGCTTAATAACT TAAAAT AGATA ATTTTA TTTTTTTGTTATTAT mgtE 876647 - 878050 + | magnesium transporter trmB 878052 - 878714 + | tRNA (guanine-N(7)-)-methyltransferase TERM 948 878917 - 878898 - T 71 -6.6 -3.9638 | opp_overlap 878897 TATTAACAGAAAATA TAGTTATA AAAA TATAACTA ACTAATTTTTATATA TERM 949 879042 - 879072 + T 85 -8.4 -4.4836 | opp_overlap 879044 879052, overlap 879043 879044 879052 879067 TAGTTTTTTAAACAT AATAAAAAAACGGC TAT GCCGTTTTTTTAAC TTTTAAATTTTATTA TERM 950 879043 - 879071 + T 90 -11.9 -3.27389 | opp_overlap 879044 879052, overlap 879042 879044 879052 879067 AGTTTTTTAAACATA ATAAAAAAACGGC TAT GCCGTTTTTTTAA CTTTTAAATTTTATT TERM 951 879044 - 879070 + T 100 -15.4 -2.54807 | opp_overlap 879044 879052, overlap 879043 879042 879052 879067 GTTTTTTAAACATAA TAAAAAAACGGC TAT GCCGTTTTTTTA ACTTTTAAATTTTAT TERM 952 879070 - 879044 - T 100 -15.4 -3.81488 | opp_overlap 879044 879043 879042 879052 879067, overlap 879052 GTTTTTTAAACATAA TAAAAAAACGGC TAT GCCGTTTTTTTA ACTTTTAAATTTTAT TERM 953 879052 - 879062 + T 100 -8.2 -5.61824 | opp_overlap 879044 879052, overlap 879044 879043 879042 AACATAATAAAAAAA CGGC TAT GCCG TTTTTTTAACTTTTA TERM 954 879062 - 879052 - T 100 -8.2 -5.94214 | opp_overlap 879052 879044 879043 879042, overlap 879044 AACATAATAAAAAAA CGGC TAT GCCG TTTTTTTAACTTTTA MCAP_0762 879680 - 879090 - | hypothetical protein MCAP_0763 880520 - 879834 - | hypothetical protein MCAP_0764 880977 - 880855 - | hypothetical protein TERM 955 881257 - 881234 - R 95 -9.7 -5.07011 | opp_overlap 881234 CATATAAAGTAAAAA GGTTCTTGA AATTAA TCAAGAACC TTTTTATTAAAATTT TERM 956 881234 - 881257 + r 95 -9.7 -5.11112 | opp_overlap 881234 CATATAAAGTAAAAA GGTTCTTGA AATTAA TCAAGAACC TTTTTATTAAAATTT hpt2 881832 - 881281 - | hypoxanthine phosphoribosyltransferase purB 883153 - 881855 - | adenylosuccinate lyase purA 884444 - 883146 - | adenylosuccinate synthetase MCAP_0768 885529 - 884729 - | TatD family deoxyribonuclease TERM 957 885661 - 885686 + H 75 -6.3 -4.62069 | opp_overlap 885654 885667, overlap 885667 TAACTTAATAAAATA AAAAAATAGTC TAAC GACTATTTTTA TTTTTCAAATGGAGG TERM 958 885680 - 885667 - H 91 -5.3 -6.17669 | opp_overlap 885661 885667, overlap 885654 AATAAAATAAAAAAA TAGTC TAAC GACTA TTTTTATTTTTCAAA TERM 959 885667 - 885680 + H 82 -5.3 -5.61881 | opp_overlap 885667 885654, overlap 885661 AATAAAATAAAAAAA TAGTC TAAC GACTA TTTTTATTTTTCAAA MCAP_0770 885990 - 887348 + | putative lipoprotein TERM 960 887426 - 887385 - T 76 -4.5 -5.33405 | opp_overlap 887385 887398 TCTATTAAATAAAAA TCCTAACTCTTATTTAACT TATT AGTTAATGTTGAGTTAGGA TTTTTTATTAATTAT TERM 961 887385 - 887426 + T 79 -4.5 -5.57396 | opp_overlap 887385, overlap 887398 TCTATTAAATAAAAA TCCTAACTCTTATTTAACT TATT AGTTAATGTTGAGTTAGGA TTTTTTATTAATTAT MCAP_0771 888903 - 887434 - | hypothetical protein MCAP_0772 889856 - 888906 - | hypothetical protein TERM 962 889981 - 889995 + H 79 -4.4 -5.70829 | overlap 889971 ATACTTTTATTTTTA TAAATT AAT AATTTA TTTTTTTATAATCTT TERM 963 890120 - 890104 - H 81 -6.6 -4.9181 | opp_overlap 890103 890104 AGATAATATTAAAAA CCAGAA GAAAT TTCTGG GTTTTTGTTATGGGA TERM 964 890104 - 890120 + H 70 -7.3 -3.70512 | opp_overlap 890104, overlap 890103 AGATAATATTAAAAA CCAGAAG AAA TTTCTGG GTTTTTGTTATGGGA uvrB 890143 - 892140 + | excinuclease ABC subunit B uvrA 892149 - 894989 + | excinuclease ABC, A subunit TERM 965 895822 - 895810 - g 76 -2.7 -5.8187 | GATGGAATAAAAAAA CTAAT CCA ATCAG TTAAATCATTAGATA folC 894982 - 896091 + | folate synthetase-polyglutamyl folate synthetase MCAP_0776 896119 - 896793 + | hypothetical protein TERM 966 896792 - 896825 + F 74 -8.3 -3.62032 | opp_overlap 896796 896802, overlap 896794 896802 ATGCTGTGATATTCT AATACAAAAAGCGCT AATT AGCGCTTTTTTTATG TTTAAACATTAATAT TERM 967 896794 - 896823 + F 87 -10.9 -3.38581 | opp_overlap 896796 896802, overlap 896792 896802 GCTGTGATATTCTAA TACAAAAAGCGCT AATT AGCGCTTTTTTTA TGTTTAAACATTAAT TERM 968 896821 - 896796 - f 75 -9.1 -3.07962 | opp_overlap 896794 896792 896802, overlap 896802 TGTGATATTCTAATA CAAAAAGCGCT AATT AGCGCTTTTTT TATGTTTAAACATTA TERM 969 896802 - 896815 + F 100 -8.1 -5.88197 | opp_overlap 896802 896796, overlap 896794 896792 ATTCTAATACAAAAA GCGCT AATT AGCGC TTTTTTTATGTTTAA TERM 970 896815 - 896802 - f 90 -8.1 -5.09762 | opp_overlap 896794 896792 896802, overlap 896796 ATTCTAATACAAAAA GCGCT AATT AGCGC TTTTTTTATGTTTAA MCAP_0777 896874 - 897815 + | HPr kinase/phosphorylase TERM 971 898953 - 898917 - g 71 -6.9 -4.1466 | opp_overlap 898919 898924, overlap 898899 898919 898938 ATTGAATTTTCAAAA TATTAAATCTAATTG CAAACAT CAATTAGATTTAATT AATAAAAAATATAGG TERM 972 898919 - 898951 + G 80 -9.5 -3.15249 | opp_overlap 898899 898917 898919 898938, overlap 898924 TGAATTTTCAAAATA TTAAATCTAATTG CAAACAT CAATTAGATTTAA TTAATAAAAAATATA TERM 973 898951 - 898919 - g 84 -9.5 -3.67 | opp_overlap 898919 898924, overlap 898899 898917 898938 TGAATTTTCAAAATA TTAAATCTAATTG CAAACAT CAATTAGATTTAA TTAATAAAAAATATA lgt1 897826 - 899406 + | prolipoprotein diacylglyceryl transferase trxB 899390 - 900322 + | thioredoxin reductase TERM 974 901404 - 901380 - g 75 -6.5 -4.55128 | opp_overlap 901381, overlap 901381 AGCTTTAAACGAAAA TGTTTGTGATA ACG CATCACAAACT TATATAAATTTAACT TERM 975 901381 - 901403 + G 83 -9.3 -3.57797 | opp_overlap 901381 901380 GCTTTAAACGAAAAT GTTTGTGAT AACGC ATCACAAAC TTATATAAATTTAAC TERM 976 901403 - 901381 - g 87 -10 -3.32354 | opp_overlap 901381, overlap 901380 GCTTTAAACGAAAAT GTTTGTGATA ACG CATCACAAAC TTATATAAATTTAAC lgt2 900331 - 901761 + | prolipoprotein diacylglyceryl transferase TERM 977 902585 - 902562 - g 76 -4.6 -5.30155 | opp_overlap 902562 TTATTAAGTAAAAAA GCGCAAGT TTTAGCTG ACTTACGC TTAAATTTTCCAGAT MCAP_0781 901773 - 902702 + | hypothetical protein TERM 978 902828 - 902855 + T 89 -5.7 -5.69023 | opp_overlap 902828 TAATGTAATGGTAAA CCCAGTTTT TTAGCCAATT AAAACTGGG TTTTTTTAATATTTT TERM 979 902999 - 902980 - T 93 -5.8 -6.04953 | opp_overlap 902980 ATACAAATAAAAAAA GAGTACTT TTAT AAATACTC TTCTTATTAATATAG MCAP_0782 904158 - 903025 - | putative lipoprotein TERM 980 903052 - 903064 + g 72 -6.3 -4.42088 | overlap 903044 ATTTTCTTTTCAAGT TGGAA GTT TTCCA TTGTTTTCTAATTTT MCAP_0783 905842 - 904220 - | PTS system, IIBC component, putative TERM 981 905617 - 905607 - G 72 -4 -5.31059 | overlap 905611 ATAGCAACTAAAAAA TCAA TAT TTGA AATAGCTATCATTCC TERM 982 905886 - 905863 - R 93 -8.2 -5.24129 | opp_overlap 905863 CCTTTCTATAAAAAA CCCAACTCCT AAAA AAGAATTGGG TTTAACTTTAACTAC MCAP_0784 906124 - 905894 - | hypothetical protein MCAP_0785 906833 - 906114 - | hypothetical protein MCAP_0786 907342 - 906833 - | hypothetical protein TERM 983 907204 - 907225 + g 73 -3.1 -5.46629 | CAAAATTTTTAGTTT GATACAA TATTTCAC TTGTATC TTTTTTTAAAATGTT MCAP_0787 909021 - 907342 - | PTS system, IIBC component, putative TERM 984 908658 - 908630 - G 78 -9.7 -3.02263 | ACAGTTTTTTTAACA CCTTCAAAGACAA TTT CTGTTTTTGAAGG ATCACCATAAACAAT MCAP_0788 909644 - 909811 + | DeoR family transcriptional regulator MCAP_0789 909935 - 910906 + | hypothetical protein TERM 985 911751 - 911719 - g 81 -7.9 -4.38116 | overlap 911720 TTGATAAAAAGGAAA GTCTTTTAAAATCAC TAA GCGATCTTAAAAGAA GTGAATCTAAGTTAT TERM 986 911750 - 911720 - g 90 -11.4 -3.21785 | overlap 911719 TGATAAAAAGGAAAG TCTTTTAAAATCAC TAA GCGATCTTAAAAGA AGTGAATCTAAGTTA TERM 987 911930 - 911918 - g 76 -6.3 -4.74598 | TAAATTTAAAATAAA TGAAC TTA GTTCA AAAATCAGTAATTTA MCAP_0790 911127 - 912845 + | hypothetical protein TERM 988 912873 - 912846 - T 91 -11.6 -3.72982 | opp_overlap 912853, overlap 912853 ATAGAAAATAATTAA TAAAAAAGGATA ATAA TATCCTTTTTTA ATGTAAACAGCTAAA TERM 989 912866 - 912853 - T 82 -5.3 -5.57396 | opp_overlap 912853, overlap 912846 ATAATTAATAAAAAA GGATA ATAA TATCC TTTTTTAATGTAAAC TERM 990 912853 - 912866 + T 76 -5.3 -5.21709 | opp_overlap 912853 912846 ATAATTAATAAAAAA GGATA ATAA TATCC TTTTTTAATGTAAAC MCAP_0791 913699 - 912884 - | hypothetical protein TERM 991 913819 - 913809 - H 72 -2.6 -5.86465 | opp_overlap 913809 AATAATATAAAAAAA TAAA AAA TTTA ATTACTTTGTCTAAT topA 913892 - 915823 + | DNA topoisomerase I TERM 992 915905 - 915882 - T 77 -8.4 -3.65046 | opp_overlap 915888, overlap 915888 TTGGTATTGTAATAA TGTAAATTTT GAAA AAAATTTACA CTCAAAAAAAACAAG TERM 993 915934 - 915917 - T 71 -2.1 -5.83822 | gap 1 TACACTCAAAAAAAA CAAG-ATA TGT TATGCTTG TATAAATATTCTAGA TERM 994 916199 - 916174 - T 72 -7.7 -3.62046 | opp_overlap 916173 916181, overlap 916181 TTATGTTTTGAACAA CTTCAAATAGA ATAA TCTATTTGATG AAATTTTAATTATAA TERM 995 916393 - 916433 + T 78 -10.2 -2.77222 | gap 1, opp_overlap 916404, overlap 916404 916429 TAAAACAATTTTTAA TATCAAAAAAAGCAAATAG GTAA CTATTTGCTTTTTTT-ATG ATTTGAAATCCTAAT TERM 996 916423 - 916404 - T 100 -9.4 -5.63374 | opp_overlap 916393 916404 TTAATATCAAAAAAA GCAAATAG GTAA CTATTTGC TTTTTTTATGATTTG TERM 997 916404 - 916423 + T 100 -9.4 -5.75599 | opp_overlap 916404, overlap 916393 TTAATATCAAAAAAA GCAAATAG GTAA CTATTTGC TTTTTTTATGATTTG TERM 998 916594 - 916615 + T 74 -3.7 -5.58074 | opp_overlap 916586 AAACACAGAAAAAAA CAGCTCA AATTTAGA TGGGCTG TTTTTTTAATCCTTA MCAP_0794 917509 - 916628 - | hypothetical protein MCAP_0795 918311 - 917496 - | hypothetical protein MCAP_0796 919653 - 918301 - | putative lipoprotein MCAP_0797 920335 - 919631 - | ABC transporter, ATP-binding protein MCAP_0798 922202 - 920337 - | ABC transporter, permease protein, putative TERM 999 922344 - 922330 - R 100 -8.6 -5.64873 | opp_overlap 922330 TTGAATAACAAAAAA TAGCCT ATA AGGCTA TTTGTTTAGATATTT TERM 1000 922330 - 922344 + r 85 -8.6 -4.5081 | opp_overlap 922330 TTGAATAACAAAAAA TAGCCT ATA AGGCTA TTTGTTTAGATATTT MCAP_0799 923238 - 922342 - | putative lipoprotein TERM 1001 923211 - 923221 + g 75 -5.4 -4.93365 | opp_overlap 923211 CAGCCATTAATATAA GACA CAA TGTC TTTTTAATTCTAAAC MCAP_0800 924070 - 923231 - | hypothetical protein MCAP_0801 925010 - 924057 - | putative lipoprotein MCAP_0802 926867 - 925029 - | hypothetical protein TERM 1002 926949 - 926970 + r 86 -7.4 -5.09173 | opp_overlap 926949 TTTAACAATAAAAAA GACTTACA CTTTTT TGTAAGTC TTTTTTAAGATATTG TERM 1003 926970 - 926949 - R 100 -7.4 -5.64873 | opp_overlap 926949 TTTAACAATAAAAAA GACTTACA CTTTTT TGTAAGTC TTTTTTAAGATATTG MCAP_0803 928741 - 926975 - | C4-dicarboxylate anaerobic carrier TERM 1004 928802 - 928785 - R 76 -4.9 -5.13473 | ATTATATTTAAAAAA GTGTTAA TAAT CTAACAC TAAATAATTAAATTC MCAP_0804 929499 - 928810 - | zinc metalloprotease, putative TERM 1005 929168 - 929189 + g 85 -6.1 -5.58454 | opp_overlap 929175 TTATCATAATAATTT TTAATAATA ATTT TATTATTAA TTTTTTTAGTATGAA TERM 1006 929325 - 929276 - G 78 -6.1 -4.93296 | gap 1, opp_overlap 929293, overlap 929279 929283 TTATTAGTATAAAAA TCATAAACTCTTAAAAATTCATAA TTA TTTTGAATCTTTACGAGTCTA-GA TATATGTTTATAAAT TERM 1007 929323 - 929279 - G 77 -8.9 -3.34102 | opp_overlap 929293, overlap 929276 929283 TTAGTATAAAAATCA TAAACTCTTAAAAATTCATAA TTA TTTTGAATCTTTACGAGTCTA GATATATGTTTATAA TERM 1008 929319 - 929283 - G 78 -7.5 -4.2928 | opp_overlap 929293, overlap 929279 929276 TATAAAAATCATAAA CTCTTAAAAATTCATAA TTA TTTTGAATCTTTACGAG TCTAGATATATGTTT TERM 1009 929474 - 929447 - G 84 -9.4 -3.76289 | opp_overlap 929446 929447 929450, overlap 929450 TTAAAATATATATAA TAAGTTATCAAA TTTC CTTGATAACTTA ATTGGTGTTTTTCTT TERM 1010 929447 - 929474 + g 73 -8.7 -2.78342 | opp_overlap 929447 929450, overlap 929446 929450 TTAAAATATATATAA TAAGTTATCAA ATTTCC TTGATAACTTA ATTGGTGTTTTTCTT engD 930600 - 929506 - | translation-associated GTPase TERM 1011 930297 - 930317 + g 73 -9.1 -2.87501 | opp_overlap 930295 930294, overlap 930295 930299 AACATCTAACAACTT GACAAATAG CAT CTGTTTGTC TAATATTTGCTAAAA TERM 1012 930580 - 930550 - G 78 -8.4 -4.01158 | AATTGCATTAAATAA TGTAGACTTTCCAA CAT TTGGTAAACCTACA ATCCCAACTTGTAAT MCAP_0806 930836 - 930636 - | hypothetical protein gidB 931533 - 930838 - | methyltransferase gidB pgsA 932129 - 931533 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1013 932247 - 932220 - R 74 -5.7 -4.89393 | opp_overlap 932225, overlap 932225 TAAATTTTACAAAAA TAAAACCTACA TTAAGC TGTAGGTTTTT TACTAACTTGTACTT TERM 1014 932225 - 932242 + r 81 -5.6 -5.18357 | opp_overlap 932220 932225 TTTACAAAAATAAAA CCTACA TTAAGC TGTAGG TTTTTTACTAACTTG TERM 1015 932242 - 932225 - R 84 -5.6 -5.35224 | opp_overlap 932225, overlap 932220 TTTACAAAAATAAAA CCTACA TTAAGC TGTAGG TTTTTTACTAACTTG TERM 1016 933927 - 933914 - R 100 -8.1 -5.72622 | opp_overlap 933920 TTGATAAATAAAAAA GAGCC ACTA GGCTC TAGATAATTTTTTTA MCAP_0810 934603 - 933920 - | hypothetical protein MCAP_0811 936116 - 934569 - | hypothetical protein TERM 1017 936179 - 936164 - R 71 -3.4 -5.50313 | CATAAAATTAAAAAA TATAAT AGTT ATTATA ATCAATTTTTAAAAA MCAP_0812 938910 - 936175 - | magnesium-transporting ATPase E1-E2 family protein TERM 1018 938633 - 938649 + g 75 -5.3 -5.00884 | opp_overlap 938629 938641 938643 AAACTCTCAAATATT TTTTTAA ATA TTAAAAA TTTTTTAACAACAAT hup 939544 - 938918 - | DNA-binding protein HU TERM 1019 940424 - 940399 - R 85 -4.7 -5.95449 | opp_overlap 940399 AAAGAAAATAAAAAA TTCCTAAGATC ATAA GATCAAAGGAA TTTTTTAACTATTTT TERM 1020 940399 - 940424 + r 73 -4.7 -5.19916 | opp_overlap 940399 AAAGAAAATAAAAAA TTCCTAAGATC ATAA GATCAAAGGAA TTTTTTAACTATTTT MCAP_0814 941860 - 940433 - | transporter protein, putative TERM 1021 941550 - 941563 + g 70 -3.1 -5.36441 | opp_overlap 941550 941559 AAGGTCATTATACAA GCAAT TAAA GTTGC TTTTTTATGTGCAAA TERM 1022 941968 - 941946 - R 81 -8 -4.41882 | opp_overlap 941942 941951 AACACAAAAACTAAA TTAAATTATT TTT AATAATTTAA TAAATATTTTTATAT TERM 1023 942043 - 942011 - R 87 -9.4 -4.43864 | opp_overlap 942019, overlap 942019 AAATACATAGCAAAA TAAAAAAAGCAACT TATTT AGTTGCTTTTTTAA AATCTAAATAAAGAT TERM 1024 942035 - 942019 - R 100 -6.6 -6.11229 | opp_overlap 942019, overlap 942011 AGCAAAATAAAAAAA GCAACT TATTT AGTTGC TTTTTTAAAATCTAA TERM 1025 942019 - 942035 + r 83 -6.6 -5.07567 | opp_overlap 942011 942019 AGCAAAATAAAAAAA GCAACT TATTT AGTTGC TTTTTTAAAATCTAA MCAP_0815 943695 - 942121 - | hypothetical protein TERM 1026 942251 - 942232 - G 73 -4.4 -5.19819 | opp_overlap 942232 AAACAAAATTAAAAA TACTCATT CAAG AATAAGTA TTAATAAAACCAATC TERM 1027 943827 - 943801 - R 71 -3.1 -5.64873 | overlap 943794 TTTAATAATAAAAAA CAACTCATTTT TTAAT AAACTAAGTTG TTTGTAAAATCTATA MCAP_0816 944483 - 943860 - | hypothetical protein asnA 945520 - 944540 - | asparagine synthetase AsnA rpsT 945932 - 946177 + | 30S ribosomal protein S20 TERM 1028 946221 - 946204 - T 75 -8.5 -3.54739 | opp_overlap 946204, overlap 946195 ATAAAATAATATTAA TCAACCT AAAT AGGTTGA TTTTTTTTATTTTCC TERM 1029 946204 - 946221 + T 100 -8.5 -6.34616 | opp_overlap 946204 946195 ATAAAATAATATTAA TCAACCT AAAT AGGTTGA TTTTTTTTATTTTCC trmE 947586 - 946228 - | tRNA modification GTPase TrmE MCAP_0820 947790 - 948014 + | hypothetical protein MCAP_0821 948123 - 949082 + | glycoprotease family protein TERM 1030 949705 - 949694 - g 70 -3 -5.62288 | TTAACAAAACAAAAA TTCT TAGA AGAA AGTAAAGTTAAATTT TERM 1031 950019 - 950009 - g 76 -2.6 -5.90231 | ATAAATAGAAAAAAA TTTA ACT TAAA TGATGAAATTTTAAT MCAP_0822 949106 - 950236 + | hypothetical protein MCAP_0823 950247 - 951086 + | HAD superfamily hydrolase asnC 951095 - 952459 + | asparaginyl-tRNA synthetase TERM 1032 952468 - 952493 + F 100 -9.9 -5.18726 | opp_overlap 952468 952472 ATTCTAATTAATAAA CAAATGCAATT TTAT AGTTGCATTTG TTTTTATTCTCAAAA TERM 1033 952493 - 952468 - f 78 -7.7 -4.32951 | opp_overlap 952468, overlap 952472 ATTCTAATTAATAAA CAAATGCAATT TTAT AGTTGCATTTG TTTTTATTCTCAAAA TERM 1034 953818 - 953802 - g 73 -2.3 -5.71295 | AGAGAAAAAGAAAAA GAACTTT TTG AAAACTC AATGGTCATTGGGGC TERM 1035 953978 - 953968 - g 70 -2.6 -5.57054 | opp_overlap 953968 AAGAAGCTAAAAAAA TATT TAA AATA TATAATCATGAAAAA MCAP_0825 952728 - 954092 + | phosphonate ABC transporter, phosphonate-binding protein, putative MCAP_0826 954106 - 954858 + | phosphonate ABC transporter, ATP-binding protein TERM 1036 954859 - 954845 - f 71 -2.9 -5.64006 | opp_overlap 954845 AGGCAATGAAAAAAA TCTAT GGAGA ATAGA TAATGTTTAATAAAA TERM 1037 955047 - 955058 + G 70 -3 -5.47218 | opp_overlap 955047 TGATAAGTTAATTAA TCTT TTTA AAGA TTTTTTTAAATGAGA TERM 1038 956551 - 956566 + G 79 -4.8 -5.61881 | opp_overlap 956553 AGAGCAATTCCAACT TATATG TATG CATATA TTTTTGTTTTTGCAG MCAP_0827 954862 - 957597 + | alkylphosphonate ABC transporter, permease protein TERM 1039 957604 - 957617 + T 100 -6.7 -6.04324 | opp_overlap 957598 957604 GATTATTAATAAAAA CCTGA TTAT TCAGG TTTTTTATTTTTTAA TERM 1040 957617 - 957604 - T 86 -6.7 -5.15167 | opp_overlap 957604, overlap 957598 GATTATTAATAAAAA CCTGA TTAT TCAGG TTTTTTATTTTTTAA MCAP_0828 959688 - 957622 - | metallo-beta-lactamase superfamily protein, putative TERM 1041 959502 - 959487 - G 73 -3.4 -5.4659 | opp_overlap 959488 TAATAGAAATAAAAA TTAAAA GTAT TTTTAA AGTATTTTTGTAATT TERM 1042 960054 - 960067 + H 100 -6.7 -5.64421 | opp_overlap 960054 CAATTTTGAATTTAA CCAGA TTTT TCTGG TTTTTTATTTGAAAT TERM 1043 960531 - 960518 - H 77 -6.7 -4.58236 | overlap 960513 GAGAAAAGATCAAAA GAACC GTTT GGTTC ACTATGAGATGGGGA TERM 1044 961807 - 961826 + H 80 -10 -3.17956 | opp_overlap 961807 AGTCGTAACAAGGTA TCCGTACG GGAA CGTGCGGA TTGATCACCTCCTTT TERM 1045 962421 - 962406 - H 73 -7.6 -3.80945 | CATTATATAATAGAA GCTACT GGGA AGTAGC GCCATAGAGGGTGAT TERM 1046 964534 - 964518 - H 79 -7.3 -4.4715 | GCTCAACGGATAAAA GTTACCC CGG GGATAAC AGGCTTATCTCCCCC TERM 1047 964755 - 964774 + H 74 -8.6 -3.21395 | gap 1, opp_overlap 964758, overlap 964759 CGAGAGGACCGGAAT GGATGCACC TCT GGTGC-TCC TGTTGTCACGCCAGT TERM 1048 964759 - 964771 + H 74 -9.1 -2.80074 | opp_overlap 964758, overlap 964755 AGGACCGGAATGGAT GCACC TCT GGTGC TCCTGTTGTCACGCC TERM 1049 965159 - 965173 + H 81 -5.7 -5.24989 | opp_overlap 965159 GCTGCCAGTTTATAA GAACC CTAGT GGTTC TTTTTTAATATATAC MCAP_0834 965268 - 966110 + | HAD superfamily hydrolase trxA 966122 - 966430 + | thioredoxin TERM 1050 966531 - 966556 + T 79 -3.4 -6.04419 | opp_overlap 966531, overlap 966526 TTTTTAATAAAAAAA GTAGAACT TTTCTTTTTT AGTTCTAC TTTTTTTATTCTTTT TERM 1051 966556 - 966531 - T 76 -3.4 -5.7946 | opp_overlap 966526 966531 TTTTTAATAAAAAAA GTAGAACT TTTCTTTTTT AGTTCTAC TTTTTTTATTCTTTT lysS 968064 - 966562 - | lysyl-tRNA synthetase TERM 1052 966999 - 967011 + g 74 -4.9 -5.12617 | CTTGGTGTTTTTCAA CATAA ACA TTATG TTTTTTAGCTAATTC dus 968993 - 968067 - | tRNA-dihydrouridine synthase TERM 1053 968238 - 968266 + g 73 -5.5 -4.90266 | opp_overlap 968241 968244 AGTTTTAAGATCTAC TAACAATTTTAAA TGT TTTAAAACTGTTG TTTTTCATTCATCAA TERM 1054 968355 - 968340 - G 70 -7.6 -3.34488 | overlap 968339 AATTTGTTCAAAAAT TCAAGG ATTT CCTTGA CAAGCTCTTGATATC MCAP_0838 969357 - 969043 - | hypothetical protein TERM 1055 969214 - 969235 + g 70 -5.9 -4.36914 | TGGATTTGCATTTGA CTCTGATAT AAAA ATTTCAGAG TTTTCTCAAACAACA serS 970719 - 969451 - | seryl-tRNA synthetase TERM 1056 969738 - 969718 - G 74 -9.1 -3.01269 | opp_overlap 969716, overlap 969705 969713 AACTTCTAAATCATA GGTTTTAGC AGA ACTAAAACC AATATCTCCACTACA TERM 1057 970791 - 970778 - R 100 -6.7 -5.65927 | opp_overlap 970773 970778 TATCTAAATAAAAAA CAAGC CACA GCTTG TTTTAATATTATTGA TERM 1058 970778 - 970791 + r 76 -6.7 -4.49937 | opp_overlap 970778, overlap 970773 TATCTAAATAAAAAA CAAGC CACA GCTTG TTTTAATATTATTGA MCAP_0840 971627 - 970800 - | hypothetical protein TERM 1059 971270 - 971252 - G 86 -7.6 -4.87807 | opp_overlap 971255 TTAACACATCAAAAA CAATTAAT GGT ATTAATTG TAATCATAACTTTTT MCAP_0841 972279 - 971695 - | hypothetical protein MCAP_0842 972588 - 972298 - | hypothetical protein TERM 1060 974094 - 974075 - g 100 -8 -6.12458 | opp_overlap 974079 CAAAAAAATAAAAAA TTAACTTC ACTA GAAGTTAA TGTAAATCCAAAGAA MCAP_0843 972758 - 974992 + | putative lipoprotein TERM 1061 975028 - 975004 - T 89 -5.7 -5.5454 | opp_overlap 975004 TTAAATAAATAAAAA TCCAAATACCT TTT AGGGCTTTGGA TTTTTTATTATTCTT TERM 1062 975004 - 975028 + T 89 -5.7 -5.70522 | opp_overlap 975004 TTAAATAAATAAAAA TCCAAATACCT TTT AGGGCTTTGGA TTTTTTATTATTCTT MCAP_0844 976778 - 975036 - | PTS system glucose-specific IIBC component TERM 1063 976549 - 976535 - G 70 -5 -4.89521 | overlap 976537 ATATTGTAAATAAAA TCGCTA AAT TAGCAA AAACAATTTGAGACA bcp 976887 - 977321 + | bacterioferritin comigratory protein TERM 1064 977363 - 977382 + F 100 -8 -5.56263 | opp_overlap 977363 ATTTTTGCTAATTAA CCTTAATA ATTT TATTAAGG TTTTTATTTTGTAAT TERM 1065 977382 - 977363 - f 71 -8 -3.33815 | opp_overlap 977363 ATTTTTGCTAATTAA CCTTAATA ATTT TATTAAGG TTTTTATTTTGTAAT TERM 1066 978495 - 978511 + G 77 -6.7 -4.60041 | opp_overlap 978495, overlap 978500 TTTTAATTTGAGAAA TACTTTT GAT AAAAGTA TTTTTAACAATAAAT TERM 1067 978916 - 978895 - g 72 -5.1 -5.0809 | opp_overlap 978895, overlap 978887 AATAAATTAGAAAAA CTTCTACCA AGTT TGGCTGAAG TTATTGAAAAAGATC MCAP_0846 977485 - 979575 + | putative lipoprotein TERM 1068 979747 - 979757 + F 71 -5.4 -4.63748 | CTTATCATTAGTATT TACC TTA GGTA TTTATTTAATTATTT TERM 1069 980004 - 980020 + F 100 -8.1 -5.88197 | opp_overlap 980007 TAAATTAACTTTTTA GAAGTAT TTT ATACTTC TTTTTTTATCTTTAG TERM 1070 980256 - 980225 - f 95 -7.6 -5.39755 | opp_overlap 980234, overlap 980226 TACAACTAGAAAAAA TTTTATAAACAATA TACC TATTGTTTATAAAC AAACATCAACTGATC TERM 1071 980255 - 980226 - f 93 -11.1 -3.82226 | opp_overlap 980234, overlap 980225 ACAACTAGAAAAAAT TTTATAAACAATA TACC TATTGTTTATAAA CAAACATCAACTGAT MCAP_0847 980325 - 981230 + | hypothetical protein TERM 1072 981723 - 981685 - g 90 -6 -5.89921 | opp_overlap 981684 ATTAGAAGAAAAAAA TGCTGATTTAGAACAGCA AAT TGATGAACTAAAACAGCA ATTAAATATAAAAGA MCAP_0848 981284 - 981748 + | transposase IS1296EH (ORFA), putative TERM 1073 981770 - 981792 + T 73 -4.9 -5.04601 | opp_overlap 981768 981770 TTATAAAAAATTAGA CCTTAGC AAGCAAACA GCTAAGG TTTTTAATTTGTAAA deoD 982449 - 981796 - | purine nucleoside phosphorylase TERM 1074 982528 - 982542 + r 73 -4.3 -5.51353 | opp_overlap 982528 AATAAAAGTTTTAAA CTAGT TTTTT ACTAG TTTTTATTATTTTTA MCAP_0850 983662 - 982682 - | hypothetical protein MCAP_0851 983814 - 984512 + | fructose operon transcriptional regulator TERM 1075 984896 - 984866 - g 82 -10 -2.97676 | opp_overlap 984875, overlap 984865 984875 AGTTATTTAAATAAG CTTTTAAAATATCT TAA AGATAATTTAAAAG AAAATGATATTGTTA MCAP_0852 984512 - 985447 + | 1-phosphofructokinase, putative fruA 985450 - 987486 + | PTS system, fructose-specific family, IIABC components TERM 1076 987639 - 987622 - f 74 -8.5 -3.30124 | opp_overlap 987622 TTTTATTTTTTATAA TCAGCAT ATTT ATGCTGA TTTTTTTATTTTTTT TERM 1077 987622 - 987639 + F 100 -8.5 -6.32976 | opp_overlap 987622 TTTTATTTTTTATAA TCAGCAT ATTT ATGCTGA TTTTTTTATTTTTTT MCAP_0854 988122 - 988697 + | hypothetical protein TERM 1078 988758 - 988782 + F 100 -9.5 -5.20222 | overlap 988759 TAGATTTCACTTTTG TTAGTTTGAAT TTA ATTCAAACTAG TTTTATTTATTTAAT TERM 1079 988759 - 988781 + F 88 -10.8 -3.69693 | overlap 988758 AGATTTCACTTTTGT TAGTTTGAAT TTA ATTCAAACTA GTTTTATTTATTTAA TERM 1080 989380 - 989367 - g 78 -5.3 -5.14477 | GAGATATGTAAAAAA CTTGA TTTA TCAAG AAATAAATTTAAAAA TERM 1081 989404 - 989388 - g 71 -5.3 -4.70887 | TTATCAAGAAATAAA TTTAAAA AAA TTTTAAA AACAACTATTGATGA MCAP_0855 988866 - 989453 + | hypothetical protein TERM 1082 989504 - 989530 + T 100 -11.1 -5.82172 | opp_overlap 989509 ATAATTCTTTTTATA CCAAATATTAG TTTTT CTAATATTTGG TTTTTTTATATTGCT TERM 1083 989798 - 989781 - T 100 -8.5 -5.69473 | opp_overlap 989781 989784, overlap 989757 TATAGCATAAAAAAA GAATTGC TATA GCAATTC TTAATCATCAATGCT TERM 1084 989781 - 989798 + T 74 -8.5 -3.22476 | opp_overlap 989757 989781, overlap 989784 TATAGCATAAAAAAA GAATTGC TATA GCAATTC TTAATCATCAATGCT gidA 991688 - 989799 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1085 991820 - 991798 - R 79 -3.5 -6.01725 | opp_overlap 991798 AATAAAAATAAAAAA GTTCAAC TAATTTAAT GTTGAAC TAATTTAGCTTTTAT MCAP_0857 993400 - 991832 - | proton/glutamate symporter family protein TERM 1086 992585 - 992595 + g 73 -6.8 -4.26327 | opp_overlap 992568 992575 992585 992584, overlap 992581 AATCATTGACATAAC TGCC AAA GGCA TTATTTTCATAAATG MCAP_0858 994765 - 993422 - | pyridine nucleotide-disulphide oxidoreductase TERM 1087 993793 - 993781 - G 70 -6.3 -4.20883 | CAAAAACTTTTAAAA TTGCA GTT TGCAA AGTTCCTACAAATTC pncA 994986 - 995486 + | pyrazinamidase/nicotinamidase TERM 1088 995481 - 995465 - T 71 -8.1 -3.24924 | overlap 995463 CGTTGATTTAGAATA CTGTAAA GGA TTTACAG ACTAATTCTTGATAT TERM 1089 995521 - 995550 + T 71 -6.7 -4.15267 | gap 1, opp_overlap 995514 995524 995529, overlap 995529 TAATAAACTGTTTAA CAACAAAAGTGATT TTT AGTCACTTTT-TTG TTTGCTTATCTTTTT TERM 1090 995529 - 995543 + T 84 -5 -5.72053 | opp_overlap 995524 995529, overlap 995521 TGTTTAACAACAAAA GTGATT TTT AGTCAC TTTTTTGTTTGCTTA TERM 1091 995648 - 995633 - T 89 -5.4 -5.63517 | opp_overlap 995626 995633 TTTTTAAATAAAAAA GGTGAC ATAA ATCACC TTAATTATTTTGTTA MCAP_0860 997977 - 995719 - | hypothetical protein TERM 1092 995898 - 995924 + g 93 -9.6 -4.4959 | opp_overlap 995904 995905, overlap 995900 TAATACGGGGTTTTA TATGAAGTAGTG ATT CACTATTTCATG TTTTCATTGCTTCAA TERM 1093 995900 - 995922 + g 93 -10 -3.85043 | opp_overlap 995904 995905, overlap 995898 ATACGGGGTTTTATA TGAAGTAGTG ATT CACTATTTCA TGTTTTCATTGCTTC TERM 1094 995982 - 995994 + g 73 -2.7 -5.73978 | CTTTAGTTTTTTGAT CTATA TTA TATGG TTTTTTATTTCTGAT TERM 1095 996525 - 996539 + g 79 -3.6 -5.65513 | CTTGTTTAGTTTTTT CTAAAT TTT GTTTAG TTTTTTTAATTGATA MCAP_0861 1000248 - 997987 - | hypothetical protein TERM 1096 999943 - 999926 - G 82 -5.7 -5.50499 | opp_overlap 999926 999923 TGAGATGCAAAAAAA CTTAAAT TTTT ATTTAAG TTATTTATTTTATCG TERM 1097 1000090 - 1000100 + g 83 -4 -5.85178 | TTCTCTATTTTTAAT TTCA GAT TGAA TTTTTTTTAACTCTT TERM 1098 1000499 - 1000487 - R 74 -3.4 -5.59357 | opp_overlap 1000480 1000487 ATGACACTAAAAAAA GACT AATTA AGTC TTTTTTACTTTTAGT TERM 1099 1000487 - 1000499 + r 71 -3.4 -5.48054 | opp_overlap 1000487, overlap 1000480 ATGACACTAAAAAAA GACT AATTA AGTC TTTTTTACTTTTAGT MCAP_0862 1002772 - 1000520 - | hypothetical protein TERM 1100 1001753 - 1001766 + g 76 -2.5 -5.95946 | AGCAAGCTGACTATT TAATT CAGA AATTA TTTTTTTATTATTAG TERM 1101 1001820 - 1001843 + g 70 -7.6 -3.45404 | overlap 1001824 TTCTTTTTTTCTTGT TGAGCTAAAA AACC TTTTAGTTCA TTGCTTCAATTTTGC TERM 1102 1001961 - 1001972 + g 73 -4.4 -5.1517 | overlap 1001958 1001953 ACTTGTTGTTGTTTA TCAG ATAA CTGA TTTTTAATTTCTTTT MCAP_0863 1003617 - 1002796 - | hypothetical protein TERM 1103 1003106 - 1003130 + g 87 -3.6 -6.20267 | overlap 1003108 1003110 TTTTTAAGCGATATT TGTATAGTGC TGTAT GCACTATCTA TTTTTTTCTTTTTAC MCAP_0864 1005037 - 1003625 - | hypothetical protein TERM 1104 1005217 - 1005202 - R 79 -4.7 -5.66229 | opp_overlap 1005202 1005197 ATTAATAAGAAAAAA CTAGC TAAATT GCTAG TTTTAAATTTTTTTT MCAP_0865 1006399 - 1005242 - | hypothetical protein MCAP_0866 1007173 - 1006457 - | hypothetical protein MCAP_0867 1007970 - 1007173 - | Cof-like hydrolase TERM 1105 1008028 - 1008044 + r 80 -9.5 -3.37556 | opp_overlap 1008028 TAACATACAAAAAAA GAGAGTT TTT AACTCTC TTAAATTATTTTAAG TERM 1106 1008044 - 1008028 - R 100 -9.5 -5.80248 | opp_overlap 1008028 TAACATACAAAAAAA GAGAGTT TTT AACTCTC TTAAATTATTTTAAG MCAP_0868 1009216 - 1008050 - | putative inner membrane protein translocase component YidC TERM 1107 1008285 - 1008301 + g 82 -4.5 -5.77571 | GATTTTTTTTGTGCT TCAGTTA AAG TAATTGA TTTTTGTTTTTTCAT TERM 1108 1008872 - 1008860 - G 72 -6.3 -4.38748 | opp_overlap 1008859 TGGATAAACAAAGAA TCCAT AGA ATGGA GATTGTGTTAATTTA rnpA 1009587 - 1009258 - | ribonuclease P protein component rpmH 1009728 - 1009594 - | 50S ribosomal protein L34 TERM 1109 1009622 - 1009632 + g 71 -6.8 -4.08579 | CTAACTCTACCTTTA GCTC TAC GAGC TTTAATTACTTTTCT