TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.683476 %AT, 515803 nt, 3191 terms. Intergenic: 0.680009 %AT, H2T: 90793 nt, 446 terms; T2T: 8766 nt, 56 terms; H2H: 9845 nt, 112 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|108885074|ref|NC_000908.2| Mycoplasma genitalium G37, complete genome (length 580076) dnaN 686 - 1828 + | DNA polymerase III, beta subunit TERM 1 1906 - 1886 - g 75 -2.6 -5.59962 | TAAAAGAAATAAAAA TTGCTTAT AAAAG ATTAGCAA AGCGTTATCACCCTG TERM 2 2128 - 2144 + G 70 -4.5 -4.92812 | overlap 2130 TGAGAATTTGATTTT TTTTCAT CTG ATGAAGA TTTCTTTTATTCTCC TERM 3 2191 - 2210 + G 76 -3.6 -5.49809 | overlap 2193 TATGCTTCCTTTTTA GATAAAGA TGTT TCTTTAGC TTTTTTTCAGCTTTA MG_002 1828 - 2760 + | DnaJ domain-containing protein TERM 4 4302 - 4287 - g 73 -7.6 -3.67173 | opp_overlap 4287 ACAAATCTTTAATAA TGCAGA AATT TCTGCA TTAGTGATGGCAATA gyrB 2845 - 4797 + | DNA gyrase subunit B gyrA 4812 - 7322 + | DNA gyrase subunit A TERM 5 7397 - 7380 - gf 72 -7.1 -3.85704 | overlap 7383 TGAGCAATTATTAAA TCAGTTT ATTC AAACTGA TAAACTAATGCGCAA TERM 6 7864 - 7841 - gf 74 -6 -4.65916 | TTGACCTTAATAAAA GCAAGTATCA AGAA TGAAACCTGC CAGTTGTTATTAATG serS 7294 - 8547 + | seryl-tRNA synthetase tmk 8551 - 9183 + | thymidylate kinase MG_007 9156 - 9920 + | DNA polymerase III subunit delta' TERM 7 11043 - 11028 - g 75 -2.6 -5.61596 | AGTTTTATAAAAAAA TAGATC AAAA AATCTA TCTGATTGAAAATTG trmE 9923 - 11251 + | tRNA modification GTPase TrmE TERM 8 11792 - 11806 + G 77 -8.6 -3.67622 | TTGACATCTTCTTTT CTATCC CAG GGATAG TTACTTTTAAGAATG MG_009 11251 - 12039 + | TatD family deoxyribonuclease TERM 9 12065 - 12042 - f 83 -8.4 -4.3467 | ATTTTGACATTAAAA GTTAAATAAA GCAA TTTATTTAAC AAATGGATGTTAGAA TERM 10 12544 - 12526 - g 86 -3.2 -6.11229 | opp_overlap 12526 ATTAAAACAAAAAAA GATTAAAA AGA TTTTTATC TGTTTTGATAATGAT MG_010 12068 - 12724 + | DNA primase-related protein TERM 11 12714 - 12727 + T 74 -3.9 -5.22943 | opp_overlap 12714, overlap 12720 TTTTAACTAATCAAC TTCTT TTTT AAGAA TTTTTTAAATTTACT MG_011 13564 - 12701 - | hypothetical protein MG_012 14432 - 13569 - | alpha-L-glutamate ligase TERM 12 14410 - 14422 + gr 85 -4.9 -5.52986 | TTAAATGCTGGATTG TAAAC AAC GTTTA TTTTTTTCATGCAAT folD 15216 - 14395 - | methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase TERM 13 17028 - 17009 - g 86 -7.2 -4.77157 | gap 1, overlap 16998 TGAAGCGATGAAAAA CGC-AGCTA AAA TAGCTTGCG CTGACACCTTTATTG MG_014 15555 - 17426 + | ABC transporter, ATP-binding/permease protein TERM 14 17661 - 17689 + G 74 -5.4 -4.93318 | gap 1, overlap 17663 AAATTTAAATGTATT CA-TTAGGCTCAC AATT GTGAGCGTAACTG TTTTTGTAGCTTATG TERM 15 17663 - 17686 + G 70 -8.2 -3.03589 | overlap 17661 ATTTAAATGTATTCA TTAGGCTCAC AATT GTGAGCGTAA CTGTTTTTGTAGCTT TERM 16 19153 - 19133 - g 72 -8.5 -3.05816 | opp_overlap 19133, overlap 19135 TTATTCGTGATGCAA CATTAATAA TGG TTATTAATG ATGGTAAAGTACTTG MG_015 17473 - 19242 + | ABC transporter, ATP-binding/permease protein TERM 17 19306 - 19276 - g 76 -3.6 -5.37593 | gap 1 GCTGAAATTAAAAAA CTTGCATTAAATA ATCAGG TATTTAATG-AAG CAAAAGCGCTTTTAG TERM 18 19977 - 19988 + G 80 -5.8 -5.1101 | opp_overlap 19976 19977 AATCAATGGATTAAG CCAC GTTT GTGG TTTTTTAAATAATAA TERM 19 20124 - 20144 + G 79 -4.8 -5.19261 | CTATAAACTTGCTTT TGGAGAAA CATTA TTTTTCCA TTTTTTAATCCATTT MG_018 19252 - 22347 + | SNF2 family helicase putative TERM 20 22476 - 22464 - g 70 -6.3 -4.16832 | overlap 22456 22462 CAAGACATAAAAAGA GCTTT TAG AAAGC TTGCAATGCAATATC TERM 21 22709 - 22740 + G 70 -4.6 -4.8269 | gap 1, opp_overlap 22718, overlap 22718 TGAGGGATTTTCCTT TGGAAT-GGATGGTG ATT CACCATTTGATTTCA TTTTTAATCGTTCTA TERM 22 22718 - 22730 + G 80 -7.7 -4.21644 | opp_overlap 22718, overlap 22709 TTCCTTTGGAATGGA TGGTG ATT CACCA TTTGATTTCATTTTT dnaJ 22389 - 23558 + | chaperone protein DnaJ pip 23542 - 24468 + | proline iminopeptidase metS 24468 - 26006 + | methionyl-tRNA synthetase rpoE 26036 - 26473 + | DNA-directed RNA polymerase subunit delta fba 26479 - 27345 + | fructose-1,6-bisphosphate aldolase, class II TERM 23 27364 - 27392 + G 82 -7.5 -4.52345 | TTAAGTGCAGGGATA GTTGGTTTACCTA ATG TTGGTAAGTCAAC TTTATTTAGTGCTAT TERM 24 28053 - 28038 - g 75 -2.6 -5.52384 | gap 1, overlap 28014 TCTTGATCAAAAAAA GATT-CC CAA GGCAATC ACAGTTTGTTCTTTA MG_024 27346 - 28449 + | translation-associated GTPase MG_025 28652 - 29548 + | glycosyl transferase, group 2 family protein efp 29552 - 30124 + | elongation factor P MG_027 30093 - 30548 + | transcription termination/antitermination protein NusB MG_028 30548 - 31153 + | hypothetical protein MG_029 31703 - 31143 - | DJ-1/PfpI family protein upp 32325 - 31705 - | uracil phosphoribosyltransferase polC-1 36714 - 32359 - | DNA polymerase III PolC TERM 25 34395 - 34407 + g 81 -4.1 -5.52807 | GAAGAAATACTTCAG GAACG GTT TGTTC TTTTTCTTTATTGTT TERM 26 34718 - 34729 + g 74 -5.8 -4.70583 | overlap 34725 GCTTTAAAGATGTCA CCCT GAAC AGGG TTTTCTGTTAATAAA TERM 27 35006 - 34995 - G 71 -3 -5.22258 | opp_overlap 34995 TAAAGTAAAAGAAAA CTTT TTTT AAAG CTTCTGTATCATATT MG_032 36977 - 38977 + | hypothetical protein glpF 39127 - 39903 + | glycerol uptake facilitator tdk 40513 - 39872 - | thymidine kinase TERM 28 40714 - 40742 + G 77 -4.6 -5.17353 | GATCTAATGCTAATG CTGATATTGTTC AAAAA GAACTATACCAG TTTTTTGATAAATCT hisS 40542 - 41786 + | histidyl-tRNA synthetase aspS 41776 - 43428 + | aspartyl-tRNA synthetase MG_037 43401 - 44753 + | putative nicotinate phosphoribosyltransferase glpK 46276 - 44750 - | glycerol kinase TERM 29 45460 - 45470 + g 76 -5.4 -5.09426 | opp_overlap 45467 GTACAAAACATCCAG TACC ATA GGTA TTTTTTACCATTCCA TERM 30 46249 - 46261 + g 82 -4.9 -5.47821 | TACCTTCATCTAAGG CAATA ATG TATTG TTTTTTTAGATCCAT TERM 31 46277 - 46306 + r 74 -5.9 -4.68528 | TTTTTTTAGATCCAT GATAAGTTGTAAT TAGG ATTTCAATTTATC TTCTTTTTTAACTTT MG_039 47421 - 46267 - | FAD-dependent glycerol-3-phosphate dehydrogenase, putative TERM 32 47334 - 47315 - G 72 -3.6 -5.1925 | opp_overlap 47314 47325 47326 TCACAACCCAAAAAA GCATTTTT TTCT AAAAGTGC AACTTTTAATTTATA TERM 33 48732 - 48752 + G 77 -8.4 -3.83921 | opp_overlap 48731 48732 GATAAGTTAAAAATG GGGAATAA AAAGA TTATTCCC TTCTCTTCTATTAAG TERM 34 48882 - 48872 - g 71 -5.4 -4.71061 | AGGTACAGTGAAAAA CAAC TCT GTTG GGGTTAGTGAAGCAG MG_040 47580 - 49355 + | putative lipoprotein ptsH 49376 - 49642 + | phosphocarrier protein HPr potA 49840 - 51519 + | spermidine/putrescine ABC transporter, ATP-binding protein, putative TERM 35 52059 - 52089 + G 80 -6.2 -4.82901 | ATTTGGGTTATAACT GGATTTACAGCTTT GTG AAAGTAGTAATTCC TTTTTCTAAAACCGC potB 51524 - 52381 + | spermidine/putrescine ABC transporter, permease protein, putative TERM 36 52827 - 52845 + G 71 -5.3 -4.55798 | TCCCATATCTCTTTT TCAGTGC CTTAT GCATTGA TTTTGATTTACCCTA potC 52365 - 53219 + | spermidine/putrescine ABC transporter, permease protein, putative MG_045 53204 - 54655 + | spermidine/putrescine ABC transporter, spermidine/putrescine binding protein, putative TERM 37 54921 - 54931 + G 74 -6.8 -4.25848 | GCAGGATGTTTACAT GTGG GAG CCAC TTTTGCTAGAAGCTT MG_046 54657 - 55604 + | O-sialoglycoprotein endopeptidase metX 55588 - 56739 + | S-adenosylmethionine synthetase TERM 38 56752 - 56730 - T 72 -5 -4.86621 | ATGCTTAATCAAAAA TTTCCATTAG ATC CTAATAAAAA AAAGGAACAACAAGG ffh 58309 - 56969 - | signal recognition particle protein TERM 39 56996 - 57009 + g 70 -4.5 -4.84363 | opp_overlap 56996, overlap 57007 TCCAAATCCACCAAA CGGGT TACT ACCTG TTTTTAATAGTTTAC TERM 40 57793 - 57783 - G 71 -6.8 -4.11216 | opp_overlap 57781 57783 TTTGCAGTTTTAAAA GCAC TGA GTGC TGCTTTTGTTGTTTT deoD 58362 - 59078 + | purine nucleoside phosphorylase TERM 41 59506 - 59527 + G 75 -8.1 -3.67498 | AAGATGCAGTTAATG TTTGCATTG ATGG CAATGCAGA TTATGTTAAAACTTC MG_050 59082 - 59753 + | deoxyribose-phosphate aldolase deoA 59740 - 61005 + | thymidine phosphorylase cdd 61014 - 61406 + | cytidine deaminase manB 61406 - 63058 + | phosphoglucomutase/phosphomannomutase, putative MG_054 63985 - 63035 - | transcription antitermination protein NusG, putative secE 64360 - 63989 - | preprotein translocase subunit SecE TERM 42 64325 - 64348 + g 81 -3.2 -5.81412 | AGCAGTTAGCTTTTC CTTCTTTTTA AAGC TAAAAGGCAG TTTTTTTTCCATGGC rpmG 64513 - 64367 - | 50S ribosomal protein L33 MG_474 64910 - 64527 - | hypothetical protein MG_056 65730 - 64897 - | tetrapyrrole (corrin/porphyrin) methylase protein TERM 43 65354 - 65334 - G 74 -4 -5.29885 | AACCTAAAAACAAAA GTGGTGTT GTTTT AAAACCAC TAGTGATCAATCCAC MG_057 66248 - 65712 - | small primase-like protein TERM 44 65873 - 65886 + g 72 -2.4 -5.37345 | opp_overlap 65873 ACTGATCTCATAATA TGCT TTGATT AGCA TTTTTTGTGATTGCA prs 67225 - 66227 - | ribose-phosphate pyrophosphokinase smpB 67643 - 67206 - | SsrA-binding protein TERM 45 67514 - 67487 - G 86 -5.8 -5.40474 | gap 1, opp_overlap 67475 67487 ACTGTTCTAAAAAAA GCTCATTGTTTTT AAC AAAAACA-TAAGC TTCTTTTAAACTACC MG_060 67650 - 68543 + | glycosyl transferase, group 2 family protein MG_061 70225 - 68522 - | MFS family transporter TERM 46 69132 - 69118 - G 91 -7.2 -5.2166 | CAATAACTCAAAAAA TAGCAA GTG TTGCTA AACCTGTTGTGTACA TERM 47 70045 - 70081 + g 70 -8.2 -3.09015 | gap 1, opp_overlap 70044 70053, overlap 70050 CAGTAAAGAAAGAAC TTAACCAACCACTGTAC TGTG GTAAAGTGGT-GGTTGA TTGAGTAAGTATACC TERM 48 70380 - 70364 - H 100 -8 -6.01725 | opp_overlap 70364 AATAAAAATAAAAAA CAGACC CTGAT GGTCTG TTGGATATTTAATGG TERM 49 70364 - 70380 + H 71 -8 -3.25479 | opp_overlap 70364 AATAAAAATAAAAAA CAGACC CTGAT GGTCTG TTGGATATTTAATGG fruA 70530 - 72572 + | PTS system, fructose-specific IIABC component fruK 72523 - 73434 + | 1-phosphofructokinase, putative TERM 50 74029 - 74003 - g 74 -8.8 -3.30338 | overlap 74007 74023 ATAATGCCTTGAGAA CTAACCCTTCTT TGT ATGAAGGATTAG TAACCCAAACTTTTA TERM 51 76714 - 76696 - g 72 -2.4 -5.40072 | TCTGCTGCAAAAAAA TACCAACT TGC AATAGGTA GTGAGATTAATATTG TERM 52 77327 - 77341 + G 72 -5.8 -4.38472 | overlap 77315 77312 CAGTGATTATTCCTA TAATCA TGT TGATTA TTCTTTTGGTTTCAA MG_064 73690 - 77685 + | ABC transporter, permease protein, putative TERM 53 77904 - 77894 - g 74 -4 -5.22258 | TAAATGAAAAGAAAA TTTC ACT GAAA CATTTGAAAGTTATT TERM 54 78135 - 78122 - g 75 -2.4 -5.66684 | TAACTTAGAAAAAAA CACT GCTATT AGTG ATGATTTACCGCTCC MG_065 77685 - 79085 + | ABC transporter, ATP-binding protein TERM 55 79270 - 79285 + G 73 -9 -2.84203 | overlap 79269 TTGTTTTAAGTGCTG GCCATG GTAG CATGGC ATTATATTCAATTTT tktA 79089 - 81035 + | transketolase TERM 56 81533 - 81515 - g 83 -6 -5.15634 | opp_overlap 81515 CATTTGATCAAAAAA CCCAATCA TTC TTATTGGG TAGGTTTGCCAATCC MG_067 81046 - 82596 + | putative lipoprotein MG_068 82620 - 84044 + | putative lipoprotein TERM 57 84258 - 84277 + F 71 -2.2 -5.36181 | gap 1 TTTTCTTGTTATTGT CTGTTATCT TCT AGG-AACAG TTTGTTTTTTTGTTT TERM 58 84501 - 84534 + F 93 -8.5 -4.78572 | opp_overlap 84504 84505 84507, overlap 84505 TTGTTTAAAATTTAT TAAGTACTTTTTTAA CTTG TTAAAAAAGTAGTTA TTTTATTAGTTGGAA TERM 59 84505 - 84530 + F 77 -9.3 -3.27772 | opp_overlap 84504 84505 84507, overlap 84501 TTAAAATTTATTAAG TACTTTTTTAA CTTG TTAAAAAAGTA GTTATTTTATTAGTT TERM 60 84530 - 84505 - f 71 -9.3 -2.5619 | opp_overlap 84505 84501, overlap 84504 84507 TTAAAATTTATTAAG TACTTTTTTAA CTTG TTAAAAAAGTA GTTATTTTATTAGTT TERM 61 85745 - 85729 - f 79 -8.7 -3.83744 | GGATTCAAACAAAGA CAGTGAG AAA CTCACCG AAGCAACTGCTTCAT TERM 62 86163 - 86175 + F 80 -9.1 -3.57971 | opp_overlap 86163 CTTAAATCAGCAAAA CACCC GGT GGGTG TTTACCCCTAACTCT TERM 63 86175 - 86163 - f 89 -9.1 -4.39386 | opp_overlap 86163 CTTAAATCAGCAAAA CACCC GGT GGGTG TTTACCCCTAACTCT TERM 64 86566 - 86554 - f 74 -9.1 -3.12909 | overlap 86552 86562 GAAACAGATAAATTA GGAGG TAA CCTCC CGGGGTTTGGGGAGG TERM 65 88340 - 88354 + G 71 -2.1 -5.42259 | TCCCTATTGCAGTTT TGCCT TTAGC AGGTA TTTTTTTAGGAATCG ptsG 88228 - 90954 + | PTS system, glucose-specific IIABC component TERM 66 90974 - 91011 + F 90 -10.1 -4.07133 | opp_overlap 90975 90981, overlap 90975 90982 TAAAACTCGATAATA ACTAAAAGCCATAAAAC CTTG GTTTTGTGGTTTTTAGC TTGTTTATAACAATA TERM 67 90975 - 91010 + F 100 -13.6 -3.03798 | opp_overlap 90975 90981, overlap 90974 90982 AAAACTCGATAATAA CTAAAAGCCATAAAAC CTTG GTTTTGTGGTTTTTAG CTTGTTTATAACAAT TERM 68 91010 - 90975 - f 81 -9.2 -3.83864 | opp_overlap 90975 90974 90982, overlap 90981 AAAACTCGATAATAA CTAAAAGCCATAAAAC CTTG GTTTTGTGGTTTTTAG CTTGTTTATAACAAT TERM 69 90982 - 91003 + F 90 -8.1 -4.8384 | opp_overlap 90981 90975, overlap 90975 90974 GATAATAACTAAAAG CCATAAAAC CTTG GTTTTGTGG TTTTTAGCTTGTTTA rpsB 91065 - 91919 + | 30S ribosomal protein S2 MG_071 91924 - 94548 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 70 94649 - 94688 + G 71 -8.3 -3.35679 | gap 2, opp_overlap 94651 94655 94657 94658, overlap 94644 TACCGTAACTTAACT GATCAAC-AG-TTATTTGA AGAG TCAAATAAACTAGTTGATC TTGTCACTAAGCAAA TERM 71 94846 - 94868 + G 88 -9.2 -4.17316 | TGCTGAGATGATGAC TGGTGAAGGT AAG ACCTTAACCA TTGTTTTAGCAGCAT TERM 72 95188 - 95199 + G 74 -7.2 -4.14764 | AGTTTTAATTGATGA GGCG CGAA CGCC TTTAATTATTTCAGG TERM 73 95642 - 95658 + G 70 -7.3 -3.6682 | opp_overlap 95633 TACAACCGCTTAGCA GCAGTAT CAG GTACTGC TTTAACTGAATCAGA secA 94535 - 96955 + | preprotein translocase subunit SecA uvrB 96933 - 98903 + | excinuclease ABC subunit B MG_074 98906 - 99319 + | hypothetical protein TERM 74 100941 - 100925 - g 77 -8.1 -3.94404 | opp_overlap 100925 AATGATGGAACTAAA TCAACAA AAA TTGTTGA TTCGATTTTAGTTGC TERM 75 100925 - 100941 + G 73 -8.1 -3.41708 | opp_overlap 100925 AATGATGGAACTAAA TCAACAA AAA TTGTTGA TTCGATTTTAGTTGC TERM 76 101230 - 101211 - g 70 -4.4 -4.87626 | CTTCAACACTAAAAA TTAAACAT CTTA ATGTTCAA TACAAAGTTTTAGTT TERM 77 102006 - 101993 - g 85 -2.4 -6.11392 | AAAGAAACAAAAAAA GAAG CTAATT CTTC ACCAGTTTTAAAGCT TERM 78 102306 - 102329 + G 77 -7.6 -4.14511 | opp_overlap 102309, overlap 102309 CAATTGACGGTTCAT TAACATTAAC ATCC GTTAATGTTG TTTTCCCATACAGTT TERM 79 102309 - 102326 + G 76 -7.1 -4.19746 | opp_overlap 102309, overlap 102306 TTGACGGTTCATTAA CATTAAC ATCC GTTAATG TTGTTTTCCCATACA MG_075 99383 - 102457 + | 116 kDa surface antigen MG_076 102870 - 102454 - | hypothetical protein TERM 80 103061 - 103081 + H 100 -6.9 -6.04953 | opp_overlap 103061 103064 TTTCCAAAAAACTGA GAACCTG AAAAAAA CAGGTTC TTTTTTTATTTCTAT oppB 103104 - 104327 + | oligopeptide ABC transporter, permease protein (OppB) oppC 104320 - 105450 + | oligopeptide ABC transporter, permease protein (OppC) TERM 81 106571 - 106553 - g 86 -9.6 -4.06781 | ACTAAAACCCATAAA GCAGCAAC TTG ATTGCTGC ATCCCCAAGCCCCTA oppD 105452 - 106660 + | oligopeptide ABC transporter, ATP-binding protein TERM 82 108399 - 108382 - g 70 -4.2 -5.01732 | AAGTGGTTCAAAAAA CTTAAC TTTATG GTTAAG AAATACAACCGACTG oppF 106660 - 109206 + | oligopeptide ABC transporter, ATP-binding protein TERM 83 109571 - 109548 - g 71 -5.4 -4.57569 | CTATTGTTGGAAAAA TCTCCTTA CAACAAGC TAAGGAGA TTGCGCAATACAAGT rplK 109262 - 109675 + | 50S ribosomal protein L11 rplA 109675 - 110355 + | 50S ribosomal protein L1 pth 110355 - 110924 + | peptidyl-tRNA hydrolase TERM 84 111222 - 111236 + G 72 -7.2 -3.90112 | CAAGTTATTATTAGC TCATCA CCG TGATGA TTTCATTGAGCAGGC MG_084 110917 - 111789 + | tRNA(Ile)-lysidine synthetase TERM 85 111803 - 111785 - f 78 -6.8 -4.53303 | CACTTTTATACAAAA GCTAAATG AAA CATTTAAC TGTCAAAGCATTAGT TERM 86 112319 - 112302 - g 72 -3.4 -5.1963 | overlap 112303 TTTAATTAATAAAAA CCACCT TCTAAT AGGTGA TGATGCTATTGAGAT ser 111790 - 112725 + | HPr kinase/phosphorylase lgt 112718 - 113866 + | prolipoprotein diacylglyceryl transferase rpsL 113895 - 114314 + | 30S ribosomal protein S12 rpS7 114331 - 114798 + | 30S ribosomal protein S7 TERM 87 115342 - 115317 - g 77 -7.7 -4.09243 | opp_overlap 115322 CATAGGTGCTGAAAA TGATTTCAATG GCAT CATTGATATCA TCACTAAAAAAGCTT fus 114808 - 116874 + | elongation factor G TERM 88 117408 - 117393 - g 80 -7.6 -4.19506 | opp_overlap 117379 117385, overlap 117379 ACGTGAACTTGAAAA GTGAAC GGTT GTTCAC CAATCAGGTAACTTT rpsF 116926 - 117552 + | 30S ribosomal protein S6 ssb 117553 - 118035 + | single-strand binding protein family rpsR 118025 - 118342 + | 30S ribosomal protein S18 TERM 89 118413 - 118427 + G 74 -2.1 -5.63517 | overlap 118411 TGTTGAAGTTAAAGA TGGGT TTGCT ATCCA TTTTTTATTTCCCAA rplI 118345 - 118797 + | 50S ribosomal protein L9 dnaB 118781 - 120187 + | replicative DNA helicase MG_095 120191 - 121387 + | putative lipoprotein TERM 90 121816 - 121803 - g 76 -5.3 -4.97405 | ATTTAGAAAAAGAAA CTGAT TATG ATCAG AACTTTAAAAGTTTT TERM 91 122225 - 122237 + G 70 -6.3 -4.23674 | opp_overlap 122224, overlap 122210 TTTGAGATGCAAATG CAGTT TCA AACTG TTTATGTTGGTGGAG TERM 92 122826 - 122798 - g 71 -3.1 -5.15634 | opp_overlap 122798 GATGTTACTAAAAAA GCTGATTTAATTG ATG CACTTAAAACCGC TATTGCTACACCAGC MG_096 121571 - 123523 + | hypothetical protein ung 123580 - 124317 + | uracil-DNA glycosylase TERM 93 125313 - 125288 - g 72 -9.1 -2.78712 | opp_overlap 125280 125290, overlap 125290 TTCTGAATGTAATTA CATTAGCAACC ACCA GTTTGCTAATG ATTAACATTGCATTT MG_098 124417 - 125850 + | aspartyl/glutamyl-tRNA amidotransferase subunit C-like protein TERM 94 126672 - 126660 - g 79 -2.7 -5.76949 | CACCTCCAAAAAAAA TGAAA TAA TCTCA AAAAAACCTTAGAAC gatA 125853 - 127286 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 95 127977 - 127954 - gf 74 -6 -4.64144 | AATAATGTTGAAAAA GCGATTGATC TTGA GATTAACCGC CAAGTTAAAGCACTT TERM 96 128085 - 128071 - gf 75 -2.8 -5.67063 | overlap 128073 TTTATGAGAAAAAAA GACAAT ACG ATTGAC TATAGGTACTTTATT gatB 127279 - 128712 + | aspartyl/glutamyl-tRNA amidotransferase subunit B MG_101 128687 - 129355 + | hypothetical protein TERM 97 129682 - 129699 + G 70 -7.1 -3.58726 | opp_overlap 129680 129679 129682 TAGATAACAAAACGA CAGTTTT TAGC AAAACTG TTATCTATGCAACAG trxB 129348 - 130295 + | thioredoxin-disulfide reductase MG_103 130285 - 131127 + | hypothetical protein secG 131149 - 131382 + | preprotein translocase subunit SecG TERM 98 131466 - 131449 - g 71 -8.5 -2.85768 | overlap 131448 AGGAAAATGGTAAAC CTATTCC CCCT GGAATAG TGGTAAGAATGATGG TERM 99 132084 - 132098 + G 70 -7.2 -3.57263 | overlap 132082 AAAGCAATCATGTTG GACAAT TCC ATTGTC TTTGAAACTAACGAT vacB 131385 - 133562 + | ribonuclease R TERM 100 134069 - 134089 + G 72 -9.1 -2.72461 | opp_overlap 134069 134072, overlap 134068 TTATTGTTAGTGAAA CAACTGGTA AAA TATCAGTTG CTTTAAAAGGGGTTA MG_105 133570 - 134172 + | hypothetical protein def 134728 - 134147 - | peptide deformylase gmk 134769 - 135338 + | guanylate kinase MG_108 135338 - 136120 + | protein phosphatase 2C, putative TERM 101 136174 - 136192 + G 74 -3.1 -5.40072 | AAGCTTTTAAATAGG GGTGGGA TGGAT TCCTATC TTTTTTTAGCAAAAA MG_109 136105 - 137268 + | serine/threonine protein kinase, putative TERM 102 137650 - 137662 + G 90 -4.9 -5.72622 | CGATTTAAAACAGTT TAACT ATC AGTTA TTTTTTGTTTCTAAA TERM 103 137938 - 137952 + G 82 -8.6 -4.08945 | CAAAATTTTAGCAGC CCAACA CTT TGTTGG TTTTCAGAAAATGAT MG_110 137255 - 138091 + | ribosome small subunit-dependent GTPase A TERM 104 138897 - 138886 - g 77 -3 -5.69473 | opp_overlap 138886 TACACCACAAAAAAA TTCA AAAT TGAA GTTTGCATTGCTTAT pgi 138112 - 139407 + | glucose-6-phosphate isomerase MG_112 139397 - 140026 + | ribulose-phosphate 3-epimerase asnC 140040 - 141410 + | asparaginyl-tRNA synthetase pgsA 141346 - 142056 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 105 142035 - 142059 + F 77 -8.7 -3.65314 | opp_overlap 142035 ATATCAGCAACTAAA GGCTTATAACT CCA AGTTATAATCC TTATTAGGCATTGGA TERM 106 142059 - 142035 - f 82 -8.7 -3.97444 | opp_overlap 142035 ATATCAGCAACTAAA GGCTTATAACT CCA AGTTATAATCC TTATTAGGCATTGGA TERM 107 142136 - 142116 - g 70 -6.2 -4.32233 | AGAAAAACTCCAAAA GTTACAAC TTAGT GTTGCAAC AGCTGAATCAGTTAC MG_115 142081 - 142554 + | competence/damage inducible protein CinA MG_116 142563 - 143318 + | hypothetical protein MG_117 143311 - 143955 + | hypothetical protein TERM 108 144626 - 144598 - g 72 -9.1 -2.74563 | TTTATATGGCAATGA TTATGCAACTA AGGATGG TAGTTGCATAA GAGATTACATCCATG TERM 109 144741 - 144755 + G 72 -7.2 -3.83155 | opp_overlap 144741 GGAGTGGGATAGGAA CTTCTA ATT TAGAAG TTATTGATATTGCTA galE 143936 - 144958 + | UDP-glucose 4-epimerase TERM 110 145619 - 145603 - g 70 -6.5 -4.17906 | opp_overlap 145603 145606, overlap 145595 AATGAAATTAAACAA GTTGCTG ATA CAGCTAC TGTCTTAAGACTTGG TERM 111 146217 - 146197 - g 81 -10.5 -2.80187 | overlap 146196 146194 GATAGACATAAATAT GGCTTGATC TTA GATCAAACC GTGAGGTTTAATACG mglA 144973 - 146667 + | ABC transporter, ATP-binding protein TERM 112 147006 - 147021 + G 85 -9 -4.01411 | opp_overlap 147008 TATCTCAGGGCAGAT GATGGC TGGA GCCATC TTTGGGTTTTTAATG TERM 113 147604 - 147614 + G 74 -6.8 -4.28361 | overlap 147599 GCTATTTCAGCAGTA CCAG CTA CTGG TTTTGATGGGATTGC TERM 114 147804 - 147788 - g 71 -8.1 -3.2375 | overlap 147783 CACTTTATAACCTAA TGGTTTA CTT TAAACCA TGAAGATACCTAGTG MG_120 146674 - 148236 + | ABC transporter, permease protein MG_121 148239 - 149159 + | ABC transporter, permease protein TERM 115 150336 - 150320 - g 88 -6.6 -5.20633 | overlap 150332 AAAAAGACATAAAAA GGATGA GAAAA TCATCC AAGATGCCCATGAAG TERM 116 150401 - 150423 + G 70 -6.2 -4.16443 | opp_overlap 150400 TGATCTGAAAAACGG GGTGAAACGC GAT GAGTTTCTCC TTTATCGTTTAATAT topA 149199 - 151328 + | DNA topoisomerase I TERM 117 152545 - 152565 + G 83 -6.9 -4.88407 | TTAAATATGATCCAT GCAGTTG AATATAA CAACTGC TTTTATTACTTTGTT TERM 118 152632 - 152645 + G 70 -3.9 -5.08824 | CTTGATCTTTTTGTT GTTTT GTTA AAAAC TTTTTTAGCTAAAAA MG_123 151306 - 152721 + | hypothetical protein TERM 119 152717 - 152731 + F 74 -5.8 -4.68705 | opp_overlap 152710, overlap 152710 CCAAAATTTTAGCGA TCTAAT TAC ATTAGA TTTTATTAGAATTGT trxA 152768 - 153076 + | thioredoxin TERM 120 153072 - 153054 - f 72 -4.7 -4.77757 | TGCCAAAAACCAAAA TTATTGA TCTTT TCAATAA CTAAAGTCCATGATT TERM 121 153212 - 153223 + G 71 -2.2 -5.34555 | AGGTGATGATTTTAA CTGG TAGA TCAG TTTTTTCTACTCTAA MG_125 153082 - 153939 + | Cof-like hydrolase, putative trpS 154963 - 153920 - | tryptophanyl-tRNA synthetase TERM 122 154278 - 154291 + g 71 -3.1 -5.22794 | gap 1 TTAAAACTATCAGTT GTG-GC TTT GCGCAC TTTTTTGATGATTGT TERM 123 154437 - 154447 + g 75 -2.6 -5.52384 | ACAGGTAATTTCAGT TTTA ACT TAAA TTTTTTTGCTACACG TERM 124 154584 - 154611 + g 75 -5 -5.07053 | GTTAACAAACCAGTT GGGATAGTAATG GTGT TATTACTATTTC TTTTTTGCGCTAATT MG_127 154999 - 155436 + | Spx subfamily protein TERM 125 156057 - 156047 - g 80 -5.4 -5.1861 | TTTAGGATCAAAAAA GCTT TTA AAGC AGAGCAATTTCCCAA ppnK 155444 - 156223 + | inorganic polyphosphate/ATP-NAD kinase MG_129 156223 - 156576 + | hypothetical protein TERM 126 157051 - 157068 + G 74 -4.1 -5.30155 | opp_overlap 157051 AAACCCTCTTTATAA CTGGG TTTATAGC CCCAG TTTTTTAATTAGTGA TERM 127 157244 - 157233 - g 81 -4.4 -5.42265 | TTAAAGCACAAAAAA CAGT GTTA ACTG TGCGCAATATCCTGA TERM 128 157734 - 157751 + G 76 -6.3 -4.57569 | CTAGAATTGGTGCTA GAAGTGA TAGT TCGCTTC TTTTTAAACAACTAA MG_130 156566 - 158020 + | hypothetical protein MG_132 159006 - 158581 - | HIT domain-containing protein MG_133 159778 - 158984 - | hypothetical protein MG_134 159798 - 160100 + | hypothetical protein MG_135 160914 - 160072 - | hypothetical protein TERM 129 160436 - 160415 - G 71 -2.3 -5.35815 | overlap 160418 GAGATTAAAGAAAAA CAGTTATCC CACA AGATAATTG CTAAGCTTACAAGTA TERM 130 161417 - 161430 + GH 83 -8.1 -4.33153 | opp_overlap 161414 CTGATATTGAAACCC GCGCT CGCA AGCGC TTTCTTGATCTTACC lysS 160963 - 162435 + | lysyl-tRNA synthetase TERM 131 162596 - 162608 + GF 70 -6.3 -4.21194 | CTCTTGTTTCACCAG TATGG ACC CCATA TTTTCCATACTAACA TERM 132 163104 - 163126 + GF 70 -4.2 -5.03314 | opp_overlap 163094 163125, overlap 163106 GCAAAGATAACCTTT TAGTTTATCA AGA TGAAAAACTG TTTTTTAACAATAAC glf 162377 - 163591 + | UDP-galactopyranose mutase TERM 133 164304 - 164319 + G 73 -4.6 -5.00616 | opp_overlap 164305, overlap 164305 CCAAATTGTGGAACT AGGGGT TAAA ACCCCA TTTTTTGAAAAAAGA TERM 134 164305 - 164318 + G 75 -8.1 -3.60048 | opp_overlap 164305, overlap 164304 CAAATTGTGGAACTA GGGGT TAAA ACCCC ATTTTTTGAAAAAAG lepA 163591 - 165387 + | GTP-binding protein LepA TERM 135 165594 - 165578 - g 70 -8.1 -3.09327 | opp_overlap 165578 GTATGGGATTGAATA TGATGAT GAA ATCATCA TTATTGACTGTGGCA TERM 136 165578 - 165594 + G 75 -8.1 -3.70773 | opp_overlap 165578 GTATGGGATTGAATA TGATGAT GAA ATCATCA TTATTGACTGTGGCA TERM 137 165974 - 165997 + G 83 -8.2 -4.30576 | opp_overlap 165979 165980 TAATGGCAACATTGT TCAAAGCGGT GACT ACCGGTTTGA TTTTGCTGCTGGGAG TERM 138 166710 - 166700 - g 77 -4 -5.37345 | GCGAACCATAAAAAA CATT GCT AATG AATGTGGCATTAAAA MG_139 165471 - 167180 + | metallo-beta-lactamase superfamily protein TERM 139 167759 - 167771 + F 81 -9.1 -3.93984 | opp_overlap 167759, overlap 167768 TTTAAATAAAGAAAA CACCC GGT GGGTG TTTATACCTAACTTT TERM 140 167771 - 167759 - f 95 -9.1 -5.18866 | opp_overlap 167759 167768 TTTAAATAAAGAAAA CACCC GGT GGGTG TTTATACCTAACTTT TERM 141 169547 - 169528 - f 79 -8.6 -3.80841 | AGTAGTAGTACCAAA GACCAAGC ACTT GCTTGATC AACAACAACTAGCTT TERM 142 171514 - 171495 - f 72 -9.2 -2.65808 | opp_overlap 171510, overlap 171492 AGTCGTAACAAGGTA CCCCTACG AGAA CGTGGGGG TGGATCACCTCCTTT TERM 143 171510 - 171526 + F 86 -10.1 -3.61371 | opp_overlap 171495 171492, overlap 171523 CCCCTACGAGAACGT GGGGGTG GAT CACCTCC TTTCAAATGGAGTTT TERM 144 171523 - 171538 + F 81 -3.2 -5.84011 | overlap 171510 GTGGGGGTGGATCAC CTCCTT TCAA ATGGAG TTTTTATTTTTTATT TERM 145 171857 - 171878 + F 73 -8.1 -3.41581 | opp_overlap 171851 171856 CCGAATGGAGCAATC TGGTAGCTT GCAA AAGTTACCA TTAATTAATGAATTC TERM 146 172018 - 172003 - f 73 -7.6 -3.66803 | opp_overlap 172002 GCGGAACAGGCCAAA CCTATC TGAG GATAGG GGTTGTAGGGCTTGC TERM 147 174630 - 174678 + F 72 -2.6 -5.34309 | overlap 174635 174636 GTAATACTAATTGCT CGAGGACTTATTGGTTGATAAA AGGTA TTTATCAACTAAAAGATTGTCG TTTTTGTTTGGTGCT TERM 148 174829 - 174804 - f 73 -9.1 -2.91824 | opp_overlap 174804, overlap 174803 174806 CAAGCAAAAATTAAG GACTATAGGTT TAAA AACCTATGGTC TTTTTTTATTTAATG TERM 149 174804 - 174829 + F 100 -11.3 -5.99154 | opp_overlap 174803 174804 174806 CAAGCAAAAATTAAG GACTATAGGTT TAAA AACCTATGGTC TTTTTTTATTTAATG TERM 150 178514 - 178537 + G 73 -4.6 -4.94962 | ATTGAAAATGTGCAG GGTGATGAAA GGGA TATCATCATC TTTTCTTTAGGTTAT MG_140 175805 - 179146 + | hypothetical protein TERM 151 179178 - 179197 + G 100 -8.6 -5.77677 | opp_overlap 179178 179181, overlap 179165 TTCATTTCTGGACAA GAAGTGTC GTTA GGCACTTC TTTTTTATTGTTTTC TERM 152 179358 - 179381 + G 73 -7.6 -3.73072 | opp_overlap 179348, overlap 179350 AAACACCTTAACTTT GTTAATGTTG AAGT TAACATTAAC TTTGATAAGGGGATT TERM 153 180507 - 180492 - g 77 -4 -5.50774 | opp_overlap 180505, overlap 180505 GATAATAAACAAAAA CAACCT GAGC AAGTTG CAAAGCAAGTTGTTG nusA 179151 - 180746 + | transcription elongation factor NusA MG_477 180746 - 181018 + | hypothetical protein TERM 154 181652 - 181683 + G 73 -4.4 -5.06414 | opp_overlap 181648 181651, overlap 181655 181658 AGAGGAAGCAATTAG CCATGCTAAGAGTG CTAA CACTCCTATCATTG TTTTTATTAACAAGA infB 181005 - 182864 + | translation initiation factor IF-2 TERM 155 183129 - 183115 - g 70 -6.4 -4.28049 | GCTAAAAGTGTAAAA CTCCAC TTT GTGAAG GATGATGCAATTGAC MG_143 182851 - 183189 + | ribosome-binding factor A MG_144 183214 - 184053 + | hypothetical protein MG_145 184053 - 184862 + | riboflavin biosynthesis protein RibF TERM 156 185236 - 185259 + G 71 -8.2 -3.32647 | opp_overlap 185236 TCTCTTTTTGTGAAA TTCTACCCAA AACT TTGGGCAGAA TTAATGTGATTAGAA TERM 157 185259 - 185236 - g 85 -10.4 -3.53012 | opp_overlap 185236 TCTCTTTTTGTGAAA TTCTACCCAA AACT TTGGGCAGAA TTAATGTGATTAGAA TERM 158 185270 - 185285 + G 70 -6.2 -4.17274 | opp_overlap 185261, overlap 185265 CAGAATTAATGTGAT TAGAAC CCTG GTTCTA TTTGCTTATTTGGTT TERM 159 185820 - 185809 - g 74 -3 -5.34055 | opp_overlap 185809 ATAAACATGAAAAAA CAAT AGGG ATTG TTTCTATGGAGGATA MG_146 184875 - 186149 + | hypothetical protein TERM 160 187186 - 187203 + G 71 -2.1 -5.37171 | gap 1, opp_overlap 187186 187188, overlap 187178 187188 ATCTTCAGTATTAAA T-ACATCT TTG AGATGTTA TTTTTCTTTAGTGTT TERM 161 187188 - 187200 + G 80 -6.3 -4.74052 | opp_overlap 187188 187186, overlap 187186 CTTCAGTATTAAATA CATCT TTG AGATG TTATTTTTCTTTAGT MG_147 186136 - 187263 + | hypothetical protein MG_148 187302 - 188531 + | hypothetical protein TERM 162 188543 - 188575 + F 71 -7.9 -3.53366 | CTAGGGTTTAATTTG TTAGCTTATTTAGAA AAA TTCAAAATAAGCAAA TTATAATTAGGTGTC MG_149 188607 - 189452 + | putative lipoprotein TERM 163 189513 - 189496 - g 71 -8.5 -2.87756 | opp_overlap 189496, overlap 189493 189498 AGAATTAACTAATGA CAGTGTA CACT TACACTG TTTTTTTATTTAATT TERM 164 189496 - 189513 + G 100 -8.5 -6.01187 | opp_overlap 189496 189493 189498 AGAATTAACTAATGA CAGTGTA CACT TACACTG TTTTTTTATTTAATT MG_478 189492 - 189956 + | hypothetical protein rpsJ 190046 - 190366 + | 30S ribosomal protein S10 rplC 190370 - 191143 + | 50S ribosomal protein L3 TERM 165 191398 - 191382 - g 91 -9.4 -4.44667 | opp_overlap 191381, overlap 191367 GGGTTCAATAAGAAA CCCCCA TTATG TGGGGG GTGGTGTTGTTTTTG rplD 191143 - 191778 + | 50S ribosomal protein L4 rplW 191782 - 192102 + | 50S ribosomal protein L23 rplB 192102 - 192959 + | 50S ribosomal protein L2 TERM 166 193060 - 193046 - g 72 -2.8 -5.5074 | CAAGCCAAGAAAAAA CCAATT AAG ACTTGG TCAAGAAGAAGTACT rpsS 192959 - 193222 + | 30S ribosomal protein S19 rplV 193225 - 193659 + | 50S ribosomal protein L22 TERM 167 194062 - 194048 - g 70 -6.4 -4.19704 | TAATGCGATTGAAAA CAGAGT ACC ACTCCG TTCAGCAATGCGCCA TERM 168 194414 - 194400 - g 75 -2.8 -5.52079 | opp_overlap 194401, overlap 194401 ATAGCAAAACAAAAA CTCACT GGT AGTGAT ATTGAAACTGCTAGT rpsC 193662 - 194468 + | 30S ribosomal protein S3 rplP 194474 - 194890 + | 50S ribosomal protein L16 rpmC 194890 - 195492 + | 50S ribosomal protein L29 rpsQ 195492 - 195749 + | 30S ribosomal protein S17 TERM 169 196037 - 196026 - g 72 -5.8 -4.41237 | ATCAAAGAAGATAAA TCCC CAAG GGGA ACAAGAATCTTTGGA rplN 195753 - 196121 + | 50S ribosomal protein L14 rplX 196121 - 196447 + | 50S ribosomal protein L24 rplE 196453 - 196995 + | 50S ribosomal protein L5 rpsN 196998 - 197183 + | 30S ribosomal protein S14 rpsH 197177 - 197602 + | 30S ribosomal protein S8 TERM 170 197645 - 197628 - g 70 -7.1 -3.64821 | overlap 197626 CAAAAATAGGAAATA GATCAAT CAAA ATTGATC CTAGTAAAGTGAGTT rplF 197609 - 198163 + | 50S ribosomal protein L6 rplR 198165 - 198512 + | 50S ribosomal protein L18 rpsE 198517 - 199152 + | 30S ribosomal protein S5 TERM 171 199499 - 199481 - g 86 -3.9 -5.89827 | AATTAGTAAAAAAAA TAACCTC CCTTT GAAGTTA ATTGGGAACACAAAA rplO 199158 - 199610 + | 50S ribosomal protein L15 secY 199610 - 201037 + | preprotein translocase subunit SecY TERM 172 201271 - 201284 + G 71 -5.3 -4.68724 | opp_overlap 201271 TATATCACTACCAAT CCATT ACCA AATGG TTTTATCTTAGATGG adk 201031 - 201675 + | adenylate kinase map 201678 - 202424 + | methionine aminopeptidase, type I infA 202424 - 202636 + | translation initiation factor IF-1 rpmJ 202647 - 202760 + | 50S ribosomal protein L36 rpsM 202760 - 203134 + | 30S ribosomal protein S13 TERM 173 203213 - 203228 + G 73 -9 -2.7924 | opp_overlap 203199, overlap 203196 ATACCATAGTATCAG CCACTG ATCC CAGTGG TAATGTCTTGTGCTG TERM 174 203305 - 203288 - g 70 -4.1 -4.99043 | gap 1, overlap 203272 203289 203290 GTTTTAGAAAGAAAA CCCCTTAC TCA GCA-GGGG TAGCAGCTGATAAGG rpS11 203134 - 203499 + | 30S ribosomal protein S11 TERM 175 204378 - 204368 - g 74 -6.8 -4.17316 | ACTGTTTGAAAAGAA GTGG GAT CCAC ACACTCCAAGAGTTA rpoA 203515 - 204501 + | DNA-directed RNA polymerase subunit alpha TERM 176 204706 - 204681 - g 71 -7.7 -3.39668 | overlap 204673 204659 204682 204690 TGCTAAAGTTGATAA CTTTAACAACC GCAG GGCTGTTAAAA AGTGGTTATTAAATA TERM 177 204705 - 204682 - g 72 -9 -2.6348 | overlap 204673 204659 204681 204690 GCTAAAGTTGATAAC TTTAACAACC GCAG GGCTGTTAAA AAGTGGTTATTAAAT rplQ 204514 - 204885 + | 50S ribosomal protein L17 MG_179 204872 - 205696 + | cobalt transporter ATP-binding subunit TERM 178 206122 - 206135 + G 70 -3.8 -5.02074 | TATCTGGAGATGATG GGGT TAAAAT ACCC TTTTTTAGAACGTAA MG_180 205681 - 206595 + | cobalt transporter ATP-binding subunit TERM 179 207242 - 207255 + G 71 -6.7 -3.97108 | AAACTCACCCCTTTT CTAGC AAAT GCTAG TTATGTTTTAACGTT TERM 180 207577 - 207595 + G 70 -7.4 -3.57971 | CTCTTCGTTAGTAGT GCCAATGG TTT CCATTGCC TTTCGCAATGCCTCT MG_181 206588 - 207850 + | metal ion ABC transporter, permease protein TERM 181 208384 - 208369 - g 70 -4 -5.01422 | opp_overlap 208378 208380, overlap 208377 208378 208380 CCATACAAAAAGAAA CTAACC AACT AGTTAG ACTAACTTTTTTTGG TERM 182 208380 - 208390 + G 77 -4 -5.42259 | opp_overlap 208369 208378 208377 208380, overlap 208378 GAAACTAACCAACTA GTTA GAC TAAC TTTTTTTGGCAGTGG truA 207843 - 208577 + | tRNA pseudouridine synthase A TERM 183 209649 - 209661 + G 76 -3.3 -5.49569 | AATCTCCAATGTTAA GGGCT TAG AGCAC TTTTTTATCTTAATG pepF 208567 - 210390 + | oligoendopeptidase F TERM 184 210522 - 210536 + G 75 -2.8 -5.63857 | opp_overlap 210522 TTGTAACTGTAATGA TGGTAA AAA TTCCCA TTTTTTTCAGTTTTT MG_184 210391 - 211344 + | adenine-specific DNA modification methylase TERM 185 211645 - 211657 + G 74 -7.7 -3.79043 | overlap 211648 GATCCTAATGATTAT CCAGT GGA ACTGG TTTCACTTGATAGTA TERM 186 211895 - 211921 + G 89 -8.8 -4.68645 | CAAATAGCATCTATG CTTTACCTGCTA CTG TATCAGGTGAAG TTTTAGTTTTAAATG TERM 187 212719 - 212697 - g 74 -6.4 -4.35874 | CAAGACAATTGAAAA CAAAAACAAT AAG AGTGTTTTTG AGGTTAATTTAAGTA TERM 188 213400 - 213416 + G 71 -2.9 -5.24129 | overlap 213403 AAAAATGTAACTAAA TTTGCAG AAC CTGCTGA TTTTTTATCCAACAA MG_185 211444 - 213549 + | putative lipoprotein TERM 189 214112 - 214100 - f 89 -9.1 -4.39386 | opp_overlap 214100 214109 TTTAAATCAGCAAAA CACCC GGT GGGTG TTTATACCTAACTTT TERM 190 214100 - 214112 + F 81 -9.1 -3.93984 | opp_overlap 214100, overlap 214109 TTTAAATCAGCAAAA CACCC GGT GGGTG TTTATACCTAACTTT TERM 191 215107 - 215097 - f 83 -6.8 -4.86731 | TTTGGCTAAACAAAA GGGT AAA ACCC AAAGGGAGGTGCATC MG_186 216016 - 216768 + | nuclease-like protein TERM 192 217430 - 217413 - g 76 -5.5 -4.97405 | overlap 217426 AGTTACAAAAACAAA CCCCAAT TAAG AGTGGGG TTGAACACAATGCCA MG_187 216761 - 218518 + | ABC transporter, ATP-binding protein TERM 193 218934 - 218949 + GF 80 -7.6 -4.21994 | TGTAACTTCAGGGGT GGCAAT CTCG ATTGCC TTTGTATATATCTTT TERM 194 219360 - 219396 + GF 95 -10.3 -4.20025 | opp_overlap 219365 219373, overlap 219363 ACAGATCCAAAGTGG CAATACTAACTTAGCAG GTG CTGCTACTTTAGTGTTG TTTGTGTTGGGAGTT TERM 195 219363 - 219393 + GF 70 -6.2 -4.21773 | opp_overlap 219365 219373, overlap 219360 GATCCAAAGTGGCAA TACTAACTTAGCAG GTG CTGCTACTTTAGTG TTGTTTGTGTTGGGA MG_188 218521 - 219510 + | ABC transporter, permease protein TERM 196 219807 - 219823 + GF 80 -5.9 -5.12707 | overlap 219791 TAGTAACGGTACTTT CAGTGTT ACT AACATTG TTTTTTACCATTTGC MG_189 219482 - 220438 + | ABC transporter, permease protein mgpA 220607 - 221563 + | DHH family phosphoesterase TERM 197 222738 - 222766 + G 71 -7.5 -3.53012 | opp_overlap 222738 222742 222761, overlap 222741 GGGATTACAACGCAA GAAACCTCTTGTT ACA AACAACAGGGTTC TTTAACCCAAGAAGA TERM 198 222762 - 222742 - g 74 -6.9 -4.27467 | opp_overlap 222741 222738, overlap 222738 222761 TTACAACGCAAGAAA CCTCTTGTT ACA AACAACAGG GTTCTTTAACCCAAG TERM 199 223069 - 223042 - g 76 -8.6 -3.48292 | opp_overlap 223020, overlap 223040 223044 ATTTAGGATTAAATA CACTGATAACTT TAGT AAGTCATCAGTA ACAGGTTGACCATAT TERM 200 223067 - 223044 - g 77 -9 -3.31162 | opp_overlap 223020, overlap 223042 223040 TTAGGATTAAATACA CTGATAACTT TAGT AAGTCATCAG TAACAGGTTGACCAT TERM 201 223634 - 223656 + G 74 -9.2 -3.10344 | opp_overlap 223629, overlap 223638 AATGAAAACAGTTAT GCACCAAACA GTT TGTTTGCTGC TATCTTAAATGAAGA TERM 202 224014 - 224026 + G 81 -9.1 -3.93984 | opp_overlap 224014, overlap 224023 TTTAAATAAAGAAAA CACCC GGT GGGTG TTTATACCTAACTTT TERM 203 224026 - 224014 - g 95 -9.1 -5.18866 | opp_overlap 224014 224023 TTTAAATAAAGAAAA CACCC GGT GGGTG TTTATACCTAACTTT TERM 204 224467 - 224478 + G 81 -4.4 -5.40072 | TAATGCCGCATTACT CCAT ACCT ATGG TTTTTTTGGCACCAA mgpB 221570 - 225904 + | MgPa adhesin TERM 205 227191 - 227172 - g 79 -8.6 -3.80841 | AGTAGTAGTACCAAA GACCAAGC ACTT GCTTGATC AACAACAACTAGCTT TERM 206 228940 - 228930 - g 85 -6.8 -5.00616 | GGTGTGGTGAAAAAA GCAC CTA GTGC ATTGAAAGCTGCTAA mgpC 225906 - 229067 + | P110 protein TERM 207 229093 - 229116 + F 100 -6.1 -6.28401 | opp_overlap 229093 TTCAATAACCTAAAA CACAATCTT TAAAAC AAGGTTGTG TTTTTTTGTTTTTTG TERM 208 229427 - 229444 + F 93 -4.9 -5.95286 | opp_overlap 229419 229427 AAAACAACTTTATAA CAAAGCT TATT AGTTTTG TTTTTTATTTTTACT TERM 209 230034 - 230012 - f 74 -6.2 -4.49906 | opp_overlap 230017, overlap 230017 CAACACTTAAACAAA GAGAACACCC GGT GGGTGTTTAC CCCTAACTCTTCACC TERM 210 230017 - 230029 + F 80 -9.1 -3.57971 | opp_overlap 230012 230017 CTTAAACAAAGAGAA CACCC GGT GGGTG TTTACCCCTAACTCT TERM 211 230029 - 230017 - f 85 -9.1 -4.02911 | opp_overlap 230017, overlap 230012 CTTAAACAAAGAGAA CACCC GGT GGGTG TTTACCCCTAACTCT TERM 212 230414 - 230402 - f 74 -9.1 -3.12909 | overlap 230400 230410 GAAACAGATAAATTA GGAGG CAA CCTCC CGGGGCTTGGGGAGG TERM 213 231653 - 231629 - f 100 -6.5 -5.88565 | opp_overlap 231629 GGGACAATAAAAAAA CTACCTGTC AACAAAA AACAGGTAG TTAATTATTTATCCA TERM 214 232460 - 232443 - g 76 -8.5 -3.38603 | opp_overlap 232441 232439 232459, overlap 232441 232459 AAATATCCCTAAAGA TCATTCC AGTA GGAATGA ATCTGATTCTTTTTA TERM 215 232459 - 232469 + G 70 -4 -4.99035 | opp_overlap 232443 232441 232459, overlap 232441 232439 CATTCCAGTAGGAAT GAAT CTG ATTC TTTTTATATCGATAA pheS 232009 - 233034 + | phenylalanyl-tRNA synthetase subunit alpha pheT 233038 - 235458 + | phenylalanyl-tRNA synthetase subunit beta TERM 216 235466 - 235506 + F 71 -9.3 -2.50994 | opp_overlap 235461 235480, overlap 235465 235475 235480 ATATTTAGAATTACT TATTACTATCAAGATAGTT ACC AACTATTTTGTTAGTAAAA CTTAATACAATTGGC TERM 217 235475 - 235497 + F 72 -8.6 -3.16921 | opp_overlap 235461 235480, overlap 235466 235465 235480 ATTACTTATTACTAT CAAGATAGTT ACC AACTATTTTG TTAGTAAAACTTAAT TERM 218 235570 - 235595 + G 73 -9.1 -2.97029 | opp_overlap 235574 235576, overlap 235569 AAAACCACTCGTTAA TGAACAGATTG CTTT CAATCAGTTCA CTTTAATTGATGAAA infC 235517 - 236062 + | translation initiation factor IF-3 TERM 219 236190 - 236178 - g 82 -6.2 -5.00851 | overlap 236173 ATCAACCAAACAAAA GCGC CATTT GCGC AAGCAAGCTACTGTG rpmI 236065 - 236244 + | 50S ribosomal protein L35 TERM 220 236532 - 236516 - g 78 -9.5 -3.22068 | CAAGATAGTCATTAA CAGAAAG GTA CTTTCTG AACTAGCAATTAAAG rplT 236247 - 236621 + | 50S ribosomal protein L20 TERM 221 236680 - 236706 + F 77 -8.8 -3.68073 | opp_overlap 236679 AATTTGACTAAAACC GCGTTGTTGGTT AAG AAATAACAACGC TTGTTCAATGCCATG TERM 222 238628 - 238608 - g 79 -6.9 -4.58946 | TGACAAACAAAACAA CTAGTGAAA CGA TTACACTAG AGATCCAACTCCTCC MG_200 237347 - 239152 + | DnaJ domain-containing protein grpE 239164 - 239817 + | co-chaperone GrpE TERM 223 240186 - 240162 - g 100 -8.7 -5.79526 | AGATGGCAAAAAAAA TGATGACGA TAATAAC TCGTCATCA AAATCATAGTTATAT MG_202 239827 - 240195 + | hypothetical protein TERM 224 240972 - 240948 - g 71 -2.9 -5.1675 | TTACTGATCAAAAAA CTAATAAAACC ACT GTTTTTTTTAG TACCTCAGGACTAGT TERM 225 241409 - 241393 - g 75 -9.5 -2.85545 | overlap 241390 GGTCCAACAACACTA TTTCCAG TTT CTGGAAA GAAACAACAATGATG parE 240323 - 242224 + | DNA topoisomerase IV, B subunit TERM 226 243973 - 243961 - g 72 -3.4 -5.1675 | TTAGTTAGTAAAAAA CCAA TCCTT TTGG AGTATGAAACGATTG parC 242224 - 244569 + | DNA topoisomerase IV, A subunit hrcA 245597 - 244566 - | heat-inducible transcription repressor TERM 227 244887 - 244899 + g 72 -3.4 -5.30616 | TTTAGCAAGGTATTG GATC CCATA GATC TTTTTATTTGCCTCA TERM 228 245091 - 245113 + g 76 -3.4 -5.41746 | overlap 245098 AATGTCTTCAAACTG CCTTTGGTTA GCA TAGCTAATGG TTTTTTTAAAGACTT TERM 229 246187 - 246176 - g 70 -4.4 -4.91873 | opp_overlap 246176 GATACTAAGGAAAAA TACC AACA GGTA ATTAGTAACATTGAA uvrC 245633 - 247426 + | excinuclease ABC, C subunit MG_207 247407 - 247910 + | Ser/Thr protein phosphatase family protein MG_208 248493 - 247903 - | glycoprotease family protein MG_209 249403 - 248477 - | RluA family pseudouridine synthase lspA 249948 - 249403 - | signal peptidase II TERM 230 250406 - 250386 - g 79 -4.7 -5.31545 | opp_overlap 250389, overlap 250391 AACAAGATTAAAAAA CAACAGTTC TCA GAACAGTTA ATTTACCAGCTAGTC MG_480 250149 - 250808 + | hypothetical protein rpsU 250808 - 250996 + | 30S ribosomal protein S21 MG_211 250998 - 251441 + | hypothetical protein acpS 251444 - 251788 + | 4'-phosphopantetheinyl transferase plsC 251781 - 252587 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative TERM 231 253024 - 253010 - g 85 -5 -5.61596 | opp_overlap 253010 ATTTTGATAAAAAAA GTAGTT ATG AACCAC CTTTCACTGTTGTTA TERM 232 253243 - 253231 - g 89 -7.7 -5.00884 | ATTCTCGCTAAAAAA GCAGA TAA TCTGC TCAATGATCATCAGG scpA 252580 - 253995 + | fused segregation and condensation protein A/unknown domain-containing protein TERM 233 254050 - 254021 - g 71 -2.1 -5.44119 | opp_overlap 254022, overlap 254022 CCTACCCTAAAAAAA CCTAGCAAAGAAG CTAA CTTGGTTGCTAGT ATCTATGGGTTGTTA scpB 253979 - 254602 + | segregation and condensation protein B TERM 234 254696 - 254720 + G 71 -2.1 -5.36441 | opp_overlap 254698, overlap 254697 254698 254719 GCTTATCTAACCAAA TATGCAATTGC AAA GCAATTGGAAG TTTTTTATGTAAAAA TERM 235 254902 - 254918 + G 70 -8.1 -3.15544 | opp_overlap 254905, overlap 254905 CAAAAAACGTGGTAT TAACAAC CTT GTTGTTA TTGGTGGGGATGGGA TERM 236 255381 - 255355 - g 84 -10.2 -3.43651 | opp_overlap 255380, overlap 255346 AAACAACGCAATTAA GTGTAACCTAGT TTC ACTAGGACACAC CCAAAGGGGCTTTAG pfkA 254621 - 255592 + | 6-phosphofructokinase pyk 255595 - 257121 + | pyruvate kinase TERM 237 257376 - 257392 + F 71 -7.9 -3.44319 | CAGTTGGTTAGAGGG CCCGGTT CAT ACCCGGG TTGTCGTGAGTTCGA TERM 238 257904 - 257934 + F 81 -9.9 -3.02461 | opp_overlap 257901 257912 257913 257914, overlap 257912 CACCATTAAAAGTTT TTAAAAAAGCCCT AAAAA GGGGCTTTTTTAG TGTTACCACCAATTA TERM 239 257926 - 257912 - f 70 -4.2 -5.03747 | opp_overlap 257904 257912, overlap 257913 257914 AAAGTTTTTAAAAAA GCCC TAAAAAG GGGC TTTTTTAGTGTTACC TERM 240 257912 - 257926 + F 79 -4.9 -5.27779 | opp_overlap 257912 257913 257914, overlap 257904 AAAGTTTTTAAAAAA GCCCT AAAAA GGGGC TTTTTTAGTGTTACC TERM 241 258269 - 258248 - g 73 -8.1 -3.43049 | overlap 258239 CAACAATTTAATCAA GCTGGTTTT GATC AAAACCAAC AGTATTACCAAGATC TERM 242 258388 - 258369 - g 74 -9.4 -2.65106 | opp_overlap 258369, overlap 258359 258368 AACAATTTAATCAAG CTGGTTTT GATC AAAACCAG TATTACCAAGATCCT TERM 243 258369 - 258388 + G 76 -9.4 -3.0263 | opp_overlap 258359 258369 258368 AACAATTTAATCAAG CTGGTTTT GATC AAAACCAG TATTACCAAGATCCT TERM 244 258445 - 258426 - g 74 -9.4 -2.65106 | opp_overlap 258426, overlap 258425 AACAATTTAACCAAT CTGGTTTT GATC AAAACCAG TACTATCAAGATCCT TERM 245 258426 - 258445 + G 74 -9.4 -2.63102 | opp_overlap 258426 258425 AACAATTTAACCAAT CTGGTTTT GATC AAAACCAG TACTATCAAGATCCT MG_217 258041 - 259159 + | proline-rich P65 protein hmw2 259177 - 264594 + | HMW2 cytadherence accessory protein TERM 246 264636 - 264618 - gf 78 -9 -3.4382 | overlap 264621 AATAATGAATATCAA CAACTAAA CAC TTTAGTTG AGAGTGATGATGAAG TERM 247 264993 - 264977 - gf 70 -8.1 -3.13403 | overlap 264975 GCTTGTTGATGAACA TTTCAGT GAT ACTGAAA AAATTATCAATACCC TERM 248 265218 - 265198 - gf 90 -9.7 -4.24623 | TCAAACAGATAGAAA CAGAGGCTA AAA TAGCCACTG AACAGGTTCAAAATA MG_491 264597 - 265637 + | hypothetical protein MG_219 265597 - 266043 + | hypothetical protein TERM 249 266060 - 266021 - T 100 -11 -6.23545 | opp_overlap 266033 266055, overlap 266022 TTCAAACAAAAAAAA GCAATAAAAAAACCAGAT CTTA ATCTGGTTTTTTTAGTGT TAACAACAGTAGTTT TERM 250 266059 - 266022 - T 100 -14.5 -4.31687 | opp_overlap 266033 266055, overlap 266021 TCAAACAAAAAAAAG CAATAAAAAAACCAGAT CTTA ATCTGGTTTTTTTAGTG TTAACAACAGTAGTT TERM 251 266033 - 266048 + T 100 -7.6 -5.63374 | opp_overlap 266022 266021 AAAGCAATAAAAAAA CCAGAT CTTA ATCTGG TTTTTTTAGTGTTAA MG_220 266356 - 266075 - | hypothetical protein TERM 252 266512 - 266537 + H 100 -12.7 -5.77677 | CCATTAACTTTATTT GCCTATCAGTT AAAT AACTGGTAGGC TTTTTTATTGTTTTG TERM 253 266983 - 266997 + G 72 -8.6 -3.12668 | AGAGATCGTGTTAAT TGGTCA ATT TGACCA TCTTGAAGTTTGGGA MG_221 266666 - 267091 + | cell division protein MraZ TERM 254 267303 - 267293 - g 71 -5.4 -4.56597 | opp_overlap 267293 GCTTTTTTTTAAAAA CAAC AAC GTTG TTATTATTCACGATA TERM 255 267532 - 267512 - g 70 -4.1 -5.04987 | opp_overlap 267512 AACAGTTTTAAAAAA CTTAACT GAACAAA AGTTAAG TCTAATCCTTAAAAA MG_222 267081 - 268010 + | S-adenosyl-methyltransferase MraW MG_223 268012 - 269247 + | hypothetical protein ftsZ 269250 - 270359 + | cell division protein FtsZ TERM 256 270800 - 270814 + GF 75 -2.8 -5.71295 | AGTTAACACTTGAAT CCTAAT TGC AATAGG TTTTTCTTTTTATGT MG_225 270405 - 271874 + | amino acid-polyamine-organocation (APC) permease family protein TERM 257 271881 - 271892 + GF 70 -4.4 -4.80455 | opp_overlap 271881, overlap 271876 ACAGTTTAGTGAAAA GCAA TTCA TTGC TTTTGTCTTTAACTA TERM 258 272108 - 272122 + GF 86 -5.8 -5.47821 | opp_overlap 272108 GTACTAACAGTAAAA CAAAAA GGT TTTTTG TTTTTTTAAGTGGGT TERM 259 272122 - 272108 - gf 72 -5.8 -4.44797 | opp_overlap 272108 GTACTAACAGTAAAA CAAAAA GGT TTTTTG TTTTTTTAAGTGGGT TERM 260 272884 - 272866 - gf 78 -6.8 -4.50686 | GCAAAAACTAATAAA CATAATGA GTA TCATCATG CAGTTTTAATTAGTA TERM 261 273016 - 273035 + GF 89 -10.8 -3.75437 | opp_overlap 273020, overlap 273020 GTTACAGTTACCATT GAAATGGC TGCA GCCATTTC TTTGATCCAATACTT TERM 262 273020 - 273031 + GF 72 -5.8 -4.49958 | opp_overlap 273020, overlap 273016 CAGTTACCATTGAAA TGGC TGCA GCCA TTTCTTTGATCCAAT MG_226 271840 - 273318 + | amino acid-polyamine-organocation (APC) permease family protein TERM 263 273496 - 273484 - f 95 -9.1 -5.18866 | opp_overlap 273484 273493 TTTAAATAAAGAAAA CACCC GGT GGGTG TTTATACCTAACTTT TERM 264 273484 - 273496 + F 81 -9.1 -3.93984 | opp_overlap 273484, overlap 273493 TTTAAATAAAGAAAA CACCC GGT GGGTG TTTATACCTAACTTT TERM 265 273862 - 273849 - g 86 -3.1 -6.12458 | TAAAAAAAGAAAAAA CCGTA CAGA TACAG ATACTTTAAGTGTCT thyA 273790 - 274653 + | thymidylate synthase TERM 266 274864 - 274847 - g 70 -7.1 -3.63744 | overlap 274853 274856 TCTCCTTTCAAAAGA TCAAAAC TACC GTTTTGA AGAAAAGGGAAGTGA dhfR 274653 - 275135 + | dihydrofolate reductase TERM 267 275510 - 275524 + G 77 -10 -2.55508 | overlap 275509 275507 GTAGGGGTACATGCC CGTTCC TAT GGAACG ATCTTCTCAACTTTA TERM 268 275854 - 275831 - g 70 -3.9 -5.04325 | CGTAAACTAGAAAAA CTCCCTTTA GCAAAA CAAAAGGAG ATGAAAGCATTTGTT nrdF 275141 - 276163 + | ribonucleotide-diphosphate reductase subunit beta TERM 269 276451 - 276433 - g 77 -7.5 -4.08557 | GTTTTTAAATAACAA GCATAAC AGGGA GTTATGC AGAGGAGTTATTGCA nrdI 276167 - 276628 + | ribonucleotide reductase stimulatory protein TERM 270 277612 - 277630 + G 71 -8.2 -3.29216 | overlap 277610 277614 TAAGGCTTTATCTGA TATCTCAG TAA CTGAGATG TATTATGAATTGCTT TERM 271 277614 - 277628 + G 74 -8.6 -3.20403 | overlap 277612 277610 AGGCTTTATCTGATA TCTCAG TAA CTGAGA TGTATTATGAATTGC TERM 272 277711 - 277725 + G 76 -8.6 -3.37622 | AACAATTGCTGAACT CCACTT TGA AAGTGG TTATCCCTACATCTT TERM 273 278349 - 278328 - g 70 -4.5 -4.92777 | AATACCAAGTAAAAA TTCCAACTC AGGA AAATTGGAA GCAATTGGTAGCAAG nrdE 276647 - 278812 + | ribonucleotide-diphosphate reductase subunit alpha rplU 278905 - 279207 + | 50S ribosomal protein L21 MG_233 279200 - 279499 + | hypothetical protein rpmA 279492 - 279806 + | 50S ribosomal protein L27 TERM 274 279807 - 279819 + G 80 -7.7 -4.29326 | opp_overlap 279811 CAACTAAATGCCTAA GCTAC TGG GTAGC TTTATTAGCTTTAAA MG_235 279799 - 280674 + | apurinic endonuclease (APN1) TERM 275 280699 - 280727 + G 70 -8.2 -3.11726 | opp_overlap 280694 280699, overlap 280698 GGTATTAGAACAAAA CAATCTGCGCTT AACAA AACCGCGGATTG CTTTATTAAAGTGTT TERM 276 280727 - 280699 - g 78 -6 -4.81212 | opp_overlap 280699 280698, overlap 280694 GGTATTAGAACAAAA CAATCTGCGCTT AACAA AACCGCGGATTG CTTTATTAAAGTGTT MG_236 280664 - 281086 + | hypothetical protein TERM 277 281266 - 281252 - g 79 -2.8 -5.75342 | TCTGGTCAAAAAAAA GGAGTT TAA AACTGC TCAAGAGAGGTGTGA MG_237 281079 - 281963 + | hypothetical protein TERM 278 282880 - 282869 - g 73 -4.4 -4.94109 | overlap 282871 282876 GAAAACAAAAAACAA GAGA CAAT TCTC CAGGAGAATAACCAA tig 281993 - 283327 + | trigger factor TERM 279 283350 - 283324 - f 82 -11 -2.55213 | opp_overlap 283317, overlap 283320 TAGCTATTCAACTCA TTAGCACTCAAA GCT TGTGAGTGCTAA GAAATGTGTTAAAAT lon 283396 - 285783 + | ATP-dependent protease La nadD 286832 - 285780 - | putative nicotinate-nucleotide adenylyltransferase TERM 280 286836 - 286820 - G 71 -6.7 -4.05193 | CACCAAAGATAATAA TTTTTTG CTT CAAAAAA GATCTTAAAACATTT TERM 281 287941 - 287923 - g 77 -3.2 -5.67711 | opp_overlap 287923 287926 287927, overlap 287926 287927 CAAACAAAACAAAAA CAGTTTTT TTT AAAAAATG ATTTCTTTTTTAATA MG_241 286885 - 288747 + | hypothetical protein TERM 282 290571 - 290584 + G 71 -3.1 -5.19998 | ATTGTAATCAGTATC GCTAG TGTT TTAGC TTTTATTTTGATTGT MG_242 288753 - 290645 + | hypothetical protein TERM 283 291627 - 291643 + G 71 -8.1 -3.25479 | opp_overlap 291623, overlap 291623 ATTAAAAAAGCGCTT TATCATC GAT GATGATA TTAGCTATTTCCTAA TERM 284 292585 - 292571 - g 70 -6.4 -4.3467 | ATCTTGATATTAAAA GAGCTT TGC AAGCCC TAAAAATTTGATCAA TERM 285 293000 - 293010 + G 78 -6.8 -4.44608 | opp_overlap 292999 293000, overlap 292997 ATGGCATGAATCAAG GGGA TTT TCCC TTATTTTTAAGTCAA MG_244 291334 - 293445 + | UvrD/REP helicase MG_245 293448 - 293945 + | 5-formyltetrahydrofolate cyclo-ligase, putative TERM 286 294374 - 294363 - g 71 -3 -5.26875 | overlap 294364 TGTGGAATTAAAAAA GTTA GTTT TAAC TAAAGATTGTGATCT MG_246 293938 - 294783 + | Ser/Thr protein phosphatase family protein MG_247 295486 - 294767 - | putative glycerol-3-phosphate acyltransferase PlsY MG_248 296129 - 295473 - | hypothetical protein rpoD 297606 - 296113 - | RNA polymerase sigma factor TERM 287 297087 - 297105 + g 70 -8.2 -3.08471 | ATTCATGGATGTGCT CTTCAACA TCG TGTTGGAG TTGAATCCCCTTATC dnaE 299474 - 297651 - | DNA primase TERM 288 298658 - 298680 + g 72 -3.4 -5.28942 | CATCAAAATAACCTT CCACAATAAA GAG TTGATTGAGG TTTTTATTTAACCTG MG_251 300804 - 299464 - | glycyl-tRNA synthetase MG_252 301552 - 300824 - | RNA methyltransferase cysS 302841 - 301555 - | cysteinyl-tRNA synthetase TERM 289 301754 - 301769 + g 91 -3.4 -6.15536 | CTAAAGTCCTTAGTT TTAATA CTTG TATTAA TTTTTTTTATTAGTT MG_254 304825 - 302846 - | DNA ligase, NAD-dependent TERM 290 303280 - 303261 - G 70 -8 -3.09272 | opp_overlap 303261, overlap 303258 ATATTTTTAAAATGA TTAGCTAA ATTC TTAGCTAA TACATTACCAACATG TERM 291 304876 - 304838 - H 77 -7.7 -4.12254 | gap 1, opp_overlap 304844, overlap 304844 CACTACTATAAATAA GAAAAATCCTGACTTAGT TGAT ACCAA-TCAGGATTTTAC AAAGAAGTTTTAATT TERM 292 304870 - 304844 - H 84 -5.3 -5.42164 | gap 1, opp_overlap 304844, overlap 304838 TATAAATAAGAAAAA TCCTGACTTAGT TGAT ACCAA-TCAGGA TTTTACAAAGAAGTT TERM 293 304924 - 304940 + H 71 -8.1 -3.25192 | overlap 304922 304927 ATCGAACCCGCATCT TAACCTT GGC AAGGTTA TGTTCTACCATTGAA MG_255 305001 - 306098 + | hypothetical protein MG_494 306202 - 306654 + | hypothetical protein TERM 294 306698 - 306731 + F 70 -8.4 -3.08508 | overlap 306700 306719 GGAAGGCCAATTTAT GATAAAAACTTAGT TAAATT GCTAGGTTTTTATC TAGTTTTAGGGGGTG TERM 295 307427 - 307407 - g 86 -4 -5.72053 | opp_overlap 307407 TAAGCAAAGAAAAAA CTGGTGTT GTTCA AAAACCAG TTCTTAACTTTCAAA MG_256 306821 - 307591 + | hypothetical protein rpmE 307637 - 307930 + | 50S ribosomal protein L31 TERM 296 308531 - 308545 + G 71 -8.6 -2.81476 | overlap 308530 308528 GTAGAGTGCATACCT CAACAG TTA CTGTTG CTGTTTTACCTCAAT prfA 307930 - 309009 + | peptide chain release factor 1 TERM 297 309406 - 309396 - g 71 -5.4 -4.61482 | opp_overlap 309396, overlap 309393 TGCTTTAAAAAAGAA GTGT GAT ACAC TTGATGTTTATGGTA TERM 298 309608 - 309622 + G 76 -6.4 -4.59773 | opp_overlap 309603 CATTAAATTATGAGC CTAAGC ACA GCTTGG TTTTTCAAAATAAAA TERM 299 310261 - 310247 - g 76 -8.6 -3.44051 | GTTTTATTATTAGAA GCACTT CTA AAGTGC AATCAAATAACACAC MG_259 309010 - 310380 + | HemK family modification methylase TERM 300 310442 - 310466 + F 100 -5.9 -5.96521 | opp_overlap 310444, overlap 310444 TAAAAATGCTTAATT CAGTTTTATTT TTG AAATAAAACTA TTTTTTTTAATTAGT TERM 301 310444 - 310464 + F 89 -8.5 -4.61485 | opp_overlap 310444, overlap 310442 AAAATGCTTAATTCA GTTTTATTT TTG AAATAAAAC TATTTTTTTTAATTA TERM 302 312026 - 312010 - g 84 -2.2 -6.11229 | AGCAAAACAAAAAAA CACTGC ACAAG GAAGTG AATCAACCACTAACA TERM 303 312634 - 312592 - g 71 -3.1 -5.20328 | gap 1, overlap 312595 TCCTAAAAAAACAAA CAATAATTCTAATACCTTTA CAGC TAAAG-CACTAGAATTATTC CAACAAGCTGCTAAC MG_260 310511 - 312808 + | putative lipoprotein TERM 304 313408 - 313396 - f 89 -9.1 -4.39386 | opp_overlap 313396, overlap 313398 CTTAAATCAGCAAAA CACCC GGT GGGTG TTTACACCTGGTAGT TERM 305 313396 - 313408 + F 80 -9.1 -3.58522 | opp_overlap 313396 313398 CTTAAATCAGCAAAA CACCC GGT GGGTG TTTACACCTGGTAGT TERM 306 313799 - 313787 - f 74 -9.1 -3.12909 | overlap 313785 313795 GAAACAGATAAATTA GGAGG CAA CCTCC CGGGGTTTGGGGAGG TERM 307 314486 - 314476 - f 70 -4.6 -4.86731 | overlap 314484 TTTGGCCAAAGAAAA GGGC AAA ACCC AAAGGGAGGTGCATC TERM 308 314965 - 314980 + F 71 -7.6 -3.54475 | AGCGAGCAGCATGAC CAGCTT GTTA AAGCTG TTGTCTAGTAAAAAC TERM 309 315271 - 315286 + F 73 -7.6 -3.69621 | opp_overlap 315271 TCTCTATTAAAAAAA CCAACT TTAA AGTTGG TTTGAAATTCTAAAT TERM 310 315286 - 315271 - f 100 -7.6 -5.52384 | opp_overlap 315271 TCTCTATTAAAAAAA CCAACT TTAA AGTTGG TTTGAAATTCTAAAT TERM 311 315780 - 315766 - g 74 -5.7 -4.56597 | opp_overlap 315765 CCTTTCTCCTAAAAA GCTAG TTAAT CTAGC AATTAATGATCAGCA TERM 312 315890 - 315870 - g 86 -9.9 -3.75762 | opp_overlap 315875, overlap 315865 GTAAGCAAAATAATA TTAAACCAA TTA TTGGTTTAA ACTTAACTGTTGAAT TERM 313 317919 - 317909 - g 77 -4 -5.48623 | AAAGACAAACAAAAA CTAA TTA TTAG AACTTTAGAAAAAAG polC-2 315701 - 318325 + | DNA polymerase III, alpha subunit TERM 314 318606 - 318637 + G 91 -8.2 -5.04601 | opp_overlap 318604 TTTTAGTACAAATTC CTCTAATTAAACAA GCGC TTGTTTATTTAGGG TTTTTAGTTTGTGAA MG_262 318332 - 319207 + | 5'-3' exonuclease, putative TERM 315 319364 - 319350 - g 81 -4.3 -5.4148 | opp_overlap 319350, overlap 319343 TAAACAATTAAAAAA TCAGT TTTTT ACTGA TATTAAGCGTAAGGG mutM 319207 - 320061 + | formamidopyrimidine-DNA glycosylase MG_263 320177 - 321052 + | Cof-like hydrolase MG_265 322414 - 321578 - | Cof-like hydrolase MG_264 321046 - 321642 + | dephospho-CoA kinase leuS 324811 - 322433 - | leucyl-tRNA synthetase TERM 316 322648 - 322636 - G 76 -6.3 -4.60487 | TAGCAGTCTCAAAAA GTTGA TAA TCAAC TAAAGAAATCGCTTG TERM 317 323205 - 323195 - G 74 -4 -5.27335 | CTTGTCAAACAAAAA TTTG TGT CAAA AACGGGCATACAAAA MG_267 325159 - 324812 - | hypothetical protein MG_268 325879 - 325193 - | hypothetical protein MG_269 327052 - 326030 - | hypothetical protein lplA 328443 - 327433 - | lipoyltransferase/lipoate-protein ligase, putative pdhD 329827 - 328454 - | dihydrolipoamide dehydrogenase TERM 318 328807 - 328817 + g 74 -3.2 -5.40072 | opp_overlap 328803 TTGTGTAAATACAAG CAGG ACA CTTG TTTTTTTCAGCAGGC pdhC 330985 - 329831 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 319 330675 - 330688 + g 74 -6.7 -4.28774 | ATTTCCCCTACTACT GAAGC CCCC GCTTC TTTTACCTTAGCTAC TERM 320 331047 - 331064 + r 85 -7 -4.99435 | opp_overlap 331047, overlap 331041 TAACAAATAAAAAAA GCCAGT TTAGTT ACTGGC TTTTTAGTTGTTAGA TERM 321 331064 - 331047 - R 100 -7 -6.08342 | opp_overlap 331041 331047 TAACAAATAAAAAAA GCCAGT TTAGTT ACTGGC TTTTTAGTTGTTAGA TERM 322 331074 - 331096 + r 82 -7.8 -4.57073 | ACTGGCTTTTTAGTT GTTAGACAAA AAT TTTGTCTTAC TTTTTACAGCAGCTG TERM 323 331217 - 331185 - R 79 -10 -2.98381 | opp_overlap 331185 331183 331182, overlap 331182 TAATTTATGAAATGA GGTACCTAGCTCTA AAAAA TAAAGCTAGGTAAC TATATTTTAAAAAAG TERM 324 331185 - 331217 + r 71 -7.8 -3.39908 | opp_overlap 331182 331185, overlap 331183 331182 TAATTTATGAAATGA GGTACCTAGCTCTA AAAAA TAAAGCTAGGTAAC TATATTTTAAAAAAG pdhB 332215 - 331235 - | pyruvate dehydrogenase component E1, beta subunit pdhA 333309 - 332233 - | pyruvate dehydrogenase component E1, alpha subunit TERM 325 332837 - 332851 + g 78 -5.7 -4.91109 | opp_overlap 332835 332837 CCAATCATAGTAACA GCAAC ATTAG GTTGC TTTTTATAGTGCAAC nox 334773 - 333337 - | NADH oxidase MG_276 335398 - 334856 - | adenine phosphoribosyltransferase MG_277 338324 - 335412 - | hypothetical protein TERM 326 338034 - 338044 + g 70 -4 -5.00884 | opp_overlap 338034 CTGAATGAATAAACT GTTA GCA TAAC TTTTTTCAACACCAT TERM 327 339164 - 339174 + G 74 -5.4 -4.80882 | opp_overlap 339164 ACAGAACATCAGTAA GATC CAT GATC TTTTTGCTATCCGCT relA 338367 - 340529 + | GTP pyrophosphokinase MG_279 341182 - 340526 - | hypothetical protein MG_280 341972 - 341175 - | hypothetical protein MG_281 343703 - 342033 - | hypothetical protein TERM 328 343807 - 343791 - R 70 -7.3 -3.71321 | opp_overlap 343797 AGTAAACTTCAATAA CCCTTTC TCT GAAAGAG CTTGGTAATTTATTA TERM 329 343859 - 343836 - R 100 -9 -5.85425 | opp_overlap 343838 343851 TAAACAAATAAAAAA CACCCTTAAA TTGC TTTAAGGATG TAATGAGTTTAAATC TERM 330 344131 - 344150 + r 73 -7.9 -3.63968 | CTAGTGAGTCTTTTT GATAGGG AGTTAA CCCTATC TTTAGAAATTTAAGC greA 344850 - 344365 - | transcription elongation factor GreA proS 345182 - 346633 + | prolyl-tRNA synthetase MG_284 346854 - 347252 + | hypothetical protein MG_285 347215 - 348258 + | hypothetical protein MG_286 348261 - 348851 + | hypothetical protein TERM 331 348988 - 348969 - g 74 -5.8 -4.57063 | gap 1, opp_overlap 348980 TGAAAAGACAATAAA TCAAC-CAC TTC GTGAGTTGA AAATCGATTCACTTG MG_287 348883 - 349137 + | acyl carrier protein TERM 332 349241 - 349210 - f 89 -10.4 -3.79419 | opp_overlap 349215, overlap 349215 CCCTGCCATAAAATA TAAAAGCTTAGTAA GTTT TTACTAAGCTTTTT TCAATCCCCCCATTC TERM 333 349215 - 349236 + F 100 -10.3 -5.08824 | opp_overlap 349215 349210 CCATAAAATATAAAA GCTTAGTAA GTTT TTACTAAGC TTTTTTCAATCCCCC TERM 334 349236 - 349215 - f 100 -10.3 -4.94487 | opp_overlap 349215, overlap 349210 CCATAAAATATAAAA GCTTAGTAA GTTT TTACTAAGC TTTTTTCAATCCCCC TERM 335 349840 - 349818 - f 95 -10.6 -4.18488 | opp_overlap 349823, overlap 349823 ACTCATCTCAACAAA GAAAACACCC GGT GGGTGTTTAC CCCTAACTCTTCACC TERM 336 349823 - 349835 + F 80 -9.1 -3.57971 | opp_overlap 349818 349823 TCTCAACAAAGAAAA CACCC GGT GGGTG TTTACCCCTAACTCT TERM 337 349835 - 349823 - f 95 -9.1 -5.09762 | opp_overlap 349823, overlap 349818 TCTCAACAAAGAAAA CACCC GGT GGGTG TTTACCCCTAACTCT TERM 338 351379 - 351411 + F 85 -10.7 -3.38072 | overlap 351381 ACCCAACCTGCATAT CTGATCAGTGGCATT GAC AGTGTCAATGATCAG TTGATCTTCAGTGGC TERM 339 351509 - 351490 - f 79 -8.6 -3.80841 | AGTAGTAGTACCAAA GACCAAGC ACTT GCTTGATC AACAACAACTAGCTT TERM 340 353660 - 353645 - f 72 -4.8 -4.87328 | GAGACAAAGAGAAAA GTTTTA ATTT TAAAAC GAGATTTTTTGATAG TERM 341 354043 - 354058 + G 74 -5.4 -4.86385 | opp_overlap 354043 TTTTCAAAAAATTTA CTTGGG TCAT TCCAAG TTTGTTTTTAACAAT TERM 342 354828 - 354809 - g 76 -3.6 -5.38958 | AGGTATAAATAAAAA CATCAAGA TTGT TTTTGATG ATGCTAATTCATTTT MG_289 354024 - 355130 + | phosphonate ABC transporter, substrate binding protein (P37), putative MG_290 355120 - 355857 + | phosphonate ABC transporter, ATP-binding protein, putative TERM 343 356426 - 356437 + G 78 -2.2 -5.73978 | CTTAGTGAAAATGAG CGAC TATG GTTG TTTTTTCTTTATAGT TERM 344 356892 - 356930 + G 85 -9.3 -3.98957 | opp_overlap 356891 356892, overlap 356890 TAATGTTAGTTAAAC TTACAACTCAAGCT-ATTA GTT TAATTAGCTTG-GTTGTAA TCTTTTCTATTCTCT TERM 345 356930 - 356892 - g 73 -9.3 -2.79803 | opp_overlap 356892 356890, overlap 356891 TAATGTTAGTTAAAC TTACAACTCAAGCT-ATTA GTT TAATTAGCTTG-GTTGTAA TCTTTTCTATTCTCT TERM 346 357194 - 357184 - g 70 -4 -5.03945 | CAATAACTATAAAAA TCAT GGT ATGA CAAAAGGTTTTATTT TERM 347 357324 - 357342 + G 74 -3.2 -5.40072 | overlap 357328 TTGGCGGTTCAATTA TTGGTAGT AGA ATTACTAA TTTTTTTGAAAGAGC MG_291 355847 - 357478 + | phosphonate ABC transporter, permease protein (P69), putative MG_505 357891 - 357475 - | hypothetical protein alaS 360593 - 357891 - | alanyl-tRNA synthetase TERM 348 358421 - 358433 + g 72 -3.5 -5.1417 | TTTCAAGTTCTGATT TTAAT TGG ATTAA TTTTTGATTTTCTGC MG_293 361385 - 360651 - | glycerophosphoryl diester phosphodiesterase family protein MG_294 362802 - 361378 - | major facilitator superfamily protein, putative TERM 349 361970 - 361960 - G 71 -5.4 -4.59109 | TACAGGCGCTAAAAA TGCA TTT TGCA ACATCTGTAAAAGGT TERM 350 362325 - 362346 + g 70 -4.5 -4.84262 | opp_overlap 362330, overlap 362330 CAGCTCCCTGAATTC CAAAACCAA GTGC TTGGTTTTC TTTTGTTGCTTGTTG TERM 351 362330 - 362341 + g 77 -4.4 -5.28831 | opp_overlap 362330, overlap 362325 CCCTGAATTCCAAAA CCAA GTGC TTGG TTTTCTTTTGTTGCT MG_295 364023 - 362920 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MG_296 364415 - 364026 - | hypothetical protein TERM 352 364189 - 364203 + g 77 -8.6 -3.59031 | overlap 364177 364187 TTTTCTACAACTTTT GCTAGA TAA TCTAGC TGTTTAATTACTTCA TERM 353 364499 - 364469 - R 73 -7.8 -3.62032 | opp_overlap 364465, overlap 364471 ATAGCAATCCTTAAA CAGTTTATTTCAGT ATT ACTTAAATAAACTA CTAACCAAAATACTG TERM 354 364497 - 364471 - R 73 -8.2 -3.38581 | opp_overlap 364465, overlap 364469 AGCAATCCTTAAACA GTTTATTTCAGT ATT ACTTAAATAAAC TACTAACCAAAATAC ftsY 365575 - 364535 - | signal recognition particle-docking protein FtsY MG_298 368530 - 365582 - | chromosome segregation protein SMC eutD 369695 - 368733 - | phosphotransacetylase TERM 355 368787 - 368777 - G 74 -5.4 -4.87626 | TTCCAACATTAAAAA TGTC ACT GACA CTAGCTCCCCTTGAA TERM 356 369293 - 369277 - G 80 -5.9 -5.03227 | overlap 369281 ACACTAGAAACAAAA TTACCAG TTG CTAGTAA CTGTAAAGCTGGTCT pgk 370948 - 369713 - | phosphoglycerate kinase gap 371963 - 370950 - | glyceraldehyde-3-phosphate dehydrogenase MG_302 372947 - 371994 - | metal ion ABC transporter, permease protein, putative MG_303 373999 - 372926 - | metal ion ABC transporter, ATP-binding protein, putative MG_304 374793 - 373981 - | metal ion ABC transporter, ATP binding protein, putative TERM 357 374866 - 374885 + r 79 -3.5 -5.64421 | opp_overlap 374868, overlap 374868 AGATAAAAAACAAAA AAGCAGC TGTTGT GCTGCTC TTTTTTATTTGGAAT TERM 358 374868 - 374883 + r 74 -6.1 -4.45696 | opp_overlap 374868, overlap 374866 ATAAAAAACAAAAAA GCAGC TGTTGT GCTGC TCTTTTTTATTTGGA TERM 359 374883 - 374868 - R 100 -6.1 -6.07374 | opp_overlap 374866 374868 ATAAAAAACAAAAAA GCAGC TGTTGT GCTGC TCTTTTTTATTTGGA dnaK 376706 - 374919 - | molecular chaperone DnaK TERM 360 376781 - 376755 - R 74 -3.1 -5.4182 | overlap 376767 AATTATAAACAAAAA TTAGCACTC AAACACTAA AAGTGCTAA TTAAAGTTTGTTTTA MG_306 377975 - 376794 - | hypothetical protein MG_307 381508 - 377975 - | putative lipoprotein MG_308 382725 - 381493 - | DEAD-box ATP dependent DNA helicase MG_309 386409 - 382732 - | putative lipoprotein TERM 361 382869 - 382857 - G 77 -9.1 -3.23692 | GATTATTAGGATTAA GCGCT TCA AGCGC AACTGTACTTAAAAA TERM 362 385026 - 385038 + g 71 -7.7 -3.56092 | opp_overlap 385020 385019 385017 CATCAACACCCATTA GATGG ATA CCATC TTTACCACGTGCTAA MG_310 386463 - 387269 + | alpha/beta fold family hydrolase rpsD 387893 - 387276 - | 30S ribosomal protein S4 hmw1 391335 - 387916 - | HMW1 cytadherence accessory protein TERM 363 389365 - 389381 + g 70 -7.3 -3.59979 | overlap 389353 TACTTGATCAAACTG CTCAACT GTT GGTTGAG TTTCAAATGAAGAAG TERM 364 390277 - 390293 + g 70 -7.3 -3.59979 | overlap 390265 TACTTGATCAAACTG CTCAACT GTT GGTTGAG TTTCAAATGAAGAAG MG_313 392258 - 391395 - | hypothetical protein TERM 365 391908 - 391888 - G 82 -2.6 -5.95946 | overlap 391898 CTAACAACAAAAAAA GTTACTAA TAGTG TTTGTAAC ACCCAAAAATCAACC MG_314 393634 - 392303 - | hypothetical protein MG_315 394551 - 393658 - | DNA polymerase III, delta subunit, putative MG_316 395584 - 394475 - | ComEC/Rec2-related protein TERM 366 395593 - 395565 - GR 95 -4.7 -6.11229 | opp_overlap 395565 AGTAAAACAAAAAAA TAAAACAGCTT TGTTTGC ATGCTGTTTTA TTAATAGATTTATTT hmw3 397424 - 395625 - | HMW3 cytadherence accessory protein TERM 367 396488 - 396500 + g 74 -6.3 -4.43309 | overlap 396475 TTGGTTGAACTTCAA CATGT GGT ACATG TTTTACTTCAGGTTG MG_318 398281 - 397439 - | P32 adhesin TERM 368 398108 - 398078 - G 100 -12.6 -3.92373 | opp_overlap 398072 398081 TACTGTAGGGATAAA TCAGGGCTGTTCAA CAA TTGATCTGCCCTGA ATTACAGTTGTATTA MG_319 398834 - 398298 - | hypothetical protein TERM 369 398940 - 398921 - R 75 -9.4 -2.92098 | overlap 398918 398923 398925 TAATTAAATTAACTA TAGAGCTT TAGA AAGCTCTA AACTCTAGAAAAATT MG_320 399798 - 398938 - | hypothetical protein TERM 370 400090 - 400074 - R 100 -10.9 -5.72622 | opp_overlap 400074 TGTATAAACAAAAAA CACACCA TTT TGGTGTG TTTTTTTATGTCCAT TERM 371 400074 - 400090 + r 100 -10.9 -5.72616 | opp_overlap 400074 TGTATAAACAAAAAA CACACCA TTT TGGTGTG TTTTTTTATGTCCAT MG_321 402923 - 400119 - | putative lipoprotein TERM 372 400850 - 400837 - G 71 -3.1 -5.29445 | overlap 400838 CTCCAATAAGAAAAA CCAAG TACA CTTGA TAAACCTATGTATCA TERM 373 401580 - 401596 + g 71 -2.9 -5.30575 | overlap 401581 ACCTGAATAAGTTAC TTGAGCA CTT TGCGCAG TTTTTTGGATTTTTA TERM 374 402199 - 402223 + g 95 -8.6 -5.03314 | opp_overlap 402199 TTGCCATCACTAGAA CCGTTGGTTT TATCC ATACCAACGG TTTTTTCAACATCAA TERM 375 402223 - 402199 - G 76 -8.6 -3.44051 | opp_overlap 402199 TTGCCATCACTAGAA CCGTTGGTTT TATCC ATACCAACGG TTTTTTCAACATCAA MG_322 405399 - 403723 - | TrkH family potassium uptake protein , putative TERM 376 404428 - 404406 - G 77 -7.8 -3.98107 | overlap 404400 CACTAAAATTAACAA TAGTGTTAGT TAA ACTATCACTA GCAATAAATTCCACC TERM 377 405379 - 405403 + g 78 -5.7 -4.82162 | opp_overlap 405384 GCCAATTTTTTTTAA CCAAGTGGTGA GTT TTACCATCTGG TTTTGTCTTCTTGTC MG_323 405456 - 406139 + | TrkA family potassium uptake protein TERM 378 406159 - 406145 - T 100 -8.6 -5.85011 | opp_overlap 406145 TAAAAATTAAAAAAA GGATCA TCA TGATCC TTTTTTTAGATAGCA TERM 379 406145 - 406159 + T 100 -8.6 -5.47218 | opp_overlap 406145 TAAAAATTAAAAAAA GGATCA TCA TGATCC TTTTTTTAGATAGCA TERM 380 406956 - 406971 + T 88 -6.1 -5.49568 | TAAGTTGGCCTTACA CTCCC CTAGTT GGGAG TTTTTATTTTGCCTT MG_515 407784 - 406975 - | hypothetical protein pepP 408793 - 407729 - | M24 family metallopeptidase rpmG 408954 - 408793 - | 50S ribosomal protein L33 MG_326 409858 - 408971 - | degV family protein MG_327 410677 - 409871 - | alpha/beta fold family hydrolase MG_328 412934 - 410664 - | hypothetical protein TERM 381 412070 - 412081 + g 71 -3 -5.15634 | GTAATTTCTTGGTAT GTAA GTGC TTAC TTTTTTCCTCAGATA engA 414319 - 412973 - | GTP-binding protein EngA TERM 382 414253 - 414235 - G 70 -7.4 -3.62572 | overlap 414238 TAGGAGTATCTGAAA CAATAGCC ATT GGCTTTTG AATTAAGCGATTAAA cmk 414976 - 414323 - | cytidylate kinase TERM 383 414834 - 414820 - G 76 -3.6 -5.42259 | opp_overlap 414805 414802, overlap 414805 TGATTTTTAAAAAAA GATCAA TAT TTAATC TATTCACTTGCATTA MG_331 415623 - 414985 - | hypothetical protein TERM 384 415046 - 415035 - G 83 -4.4 -5.55001 | TAAGAAAAAACAAAA TGCT AAAC AGCA TGAAACTTATTAAAG TERM 385 415141 - 415125 - G 70 -8.1 -3.16564 | GTTCGATGTTATCAA TGCTTTT TTT AAAAGCA AAACTTTCAGTTGAA MG_332 416330 - 415611 - | hypothetical protein valS 419480 - 416967 - | valyl-tRNA synthetase TERM 386 417070 - 417085 + g 74 -4 -5.26119 | opp_overlap 417084 ACCTTTTCTTTGGGT GCTTTT TCTA GAAAGC TTTTATTTTTAACAA TERM 387 419161 - 419175 + g 83 -5.8 -5.14626 | TTATCATCATCTGCA TCAAAA TAT TTTTGA TTTTCTTTTAATGCT engB 420045 - 419470 - | GTPase EngB TERM 388 419531 - 419556 + g 87 -9.9 -3.89614 | opp_overlap 419528 AAAGCAAGATTATGA TGTGTTTTTGT ACTT GCAAAAACACA TTTATCAAAATTAAC MG_516 420274 - 420053 - | hypothetical protein TERM 389 421214 - 421196 - g 76 -5.4 -5.09204 | opp_overlap 421196 ATACTTTAAGAAAAA TTTTTCTG AAT CAAAAAAA ATTCTTGAAAAACTA MG_517 420333 - 421358 + | glycosyl transferase, group 2 family protein nifS 421467 - 422693 + | aminotransferase, class V MG_337 422697 - 423113 + | hypothetical protein MG_338 426912 - 423100 - | putative lipoprotein TERM 390 426066 - 426095 + g 87 -10.9 -3.5394 | opp_overlap 426070, overlap 426060 426070 TTTGTAATTGTTTAT CAAACTCTTCAAA TAAT TTTGCAGAGTTTG TTTGACCACCACTTT TERM 391 426070 - 426091 + g 72 -5.9 -4.41348 | opp_overlap 426070, overlap 426066 TAATTGTTTATCAAA CTCTTCAAA TAAT TTTGCAGAG TTTGTTTGACCACCA TERM 392 426333 - 426346 + g 70 -3.9 -5.06052 | TTAAATTGCTGTTAA TAAAC TTAA GTTTA TTTTCTGTTTTTTCA recA 428112 - 427090 - | recombinase A TERM 393 427814 - 427791 - G 87 -11.2 -3.40907 | opp_overlap 427781 TTAGATCAATACCAA TTGATTTAGC ATAT GCTAAATCAA GTGCACCTTCAGCAT TERM 394 427983 - 428008 + g 95 -8.5 -5.30616 | gap 1, opp_overlap 427973, overlap 427973 427987 CTAAATTTAAACTTC CAGTTGAAATTG TTT CAATTTC-ACTG TTTTTCTTTGCATCA TERM 395 427987 - 428005 + g 74 -9 -3.15131 | opp_overlap 427973, overlap 427973 427983 ATTTAAACTTCCAGT TGAAATTG TTT CAATTTCA CTGTTTTTCTTTGCA TERM 396 428206 - 428218 + r 74 -4.1 -5.29742 | overlap 428194 TTTTCTTAAAAAAAT CTCTT TTT AGGAG TTTATTTTTTTATAT TERM 397 429361 - 429342 - R 79 -8.6 -3.80841 | AGTAGTAGTACCAAA GACCAAGC ACTT GCTTGATC AACAACAACTAGCTT TERM 398 429973 - 429932 - R 85 -10.3 -3.48269 | gap 1, opp_overlap 429929 429932 429932 429936 429936, overlap 429926 429936 429939 CCGAGCAAATAGCAA GAGAGAAGAGGATGGGGA TGCCAAC TCCCCCTCCCCTTCT-TC TTCTTCTTCTTCTTC TERM 399 429932 - 429973 + r 83 -8.1 -4.15654 | gap 1, opp_overlap 429932 429926 429936 429939, overlap 429929 429932 429936 429936 CCGAGCAAATAGCAA GAGAGAAGAGGATGGGGA TGCCAAC TCCCCCTCCCCTTCT-TC TTCTTCTTCTTCTTC TERM 400 429970 - 429936 - R 90 -12.2 -3.20955 | opp_overlap 429932 429932 429929 429936 429936, overlap 429932 429926 429939 GCAAATAGCAAGAGA GAAGAGGATGGGGA TGCCAAC TCCCCCTCCCCTTC TTCTTCTTCTTCTTC TERM 401 429936 - 429970 + r 93 -10 -4.15654 | opp_overlap 429936 429932 429926 429939, overlap 429932 429932 429929 429936 GCAAATAGCAAGAGA GAAGAGGATGGGGA TGCCAAC TCCCCCTCCCCTTC TTCTTCTTCTTCTTC TERM 402 429936 - 429976 + r 80 -7.6 -4.15654 | opp_overlap 429936 429932 429926 429939, overlap 429936 429932 429932 429929 GCAAATAGCAAGAGA GAAGAGGATGGGGATG CCAACTCCC CCTCCCCTTCTTCTTC TTCTTCTTCTTCTTC TERM 403 429967 - 429939 - R 75 -8.1 -3.72396 | opp_overlap 429936 429932 429936 429932 429929, overlap 429936 429932 429926 AATAGCAAGAGAGAA GAGGATGGGGA TGCCAAC TCCCCCTCCCC TTCTTCTTCTTCTTC TERM 404 430144 - 430122 - R 95 -10.6 -4.49906 | opp_overlap 430127, overlap 430127 430129 CAACATTTAAATAAA GAAAACACCC GGT GGGTGTTTAC ACCTGGTAGTACACC TERM 405 430139 - 430127 - R 95 -9.1 -5.18866 | opp_overlap 430127, overlap 430122 430129 TTTAAATAAAGAAAA CACCC GGT GGGTG TTTACACCTGGTAGT TERM 406 430127 - 430139 + r 80 -9.1 -3.58522 | opp_overlap 430127 430122 430129 TTTAAATAAAGAAAA CACCC GGT GGGTG TTTACACCTGGTAGT rpoC 434458 - 430580 - | DNA-directed RNA polymerase subunit beta' TERM 407 434298 - 434308 + g 78 -6.8 -4.40993 | TCATCAAACAAGCCT CCAG GTT CTGG TTTTAATGATTTATA rpoB 438640 - 434468 - | DNA-directed RNA polymerase subunit beta TERM 408 437489 - 437501 + g 77 -7.7 -4.06419 | opp_overlap 437489, overlap 437475 TCTCCCTGCATTAGA GAGGT TGT ACCTC TTGTTTCTAAAAAAA TERM 409 438235 - 438223 - G 72 -3.3 -5.20333 | opp_overlap 438224, overlap 438224 CATTGATAATAAAAA CCCCA TCA TGGGT TATTAAAGGCATGCT TERM 410 438271 - 438284 + g 77 -3.9 -5.41941 | opp_overlap 438260, overlap 438260 AAAATACACCATTTG TATTG CTAG CAATA TTTTTCTTTGATTTC TERM 411 438709 - 438675 - R 75 -5.1 -4.98616 | gap 1, overlap 438676 TCAAAACATTAAAAA GCCACTAACA-GCGTT ATAA AACGCATGCTAATGGA CTTAATCACAGTTCG TERM 412 438708 - 438676 - R 77 -8.6 -3.57543 | gap 1, overlap 438675 CAAAACATTAAAAAG CCACTAACA-GCGTT ATAA AACGCATGCTAATGG ACTTAATCACAGTTC MG_342 439236 - 438730 - | NADPH-dependent FMN reductase domain-containing protein MG_343 440355 - 439315 - | hypothetical protein MG_344 441180 - 440359 - | alpha/beta fold family hydrolase ileS 443878 - 441191 - | isoleucyl-tRNA synthetase TERM 413 443850 - 443864 + g 75 -5 -5.10497 | GCAAAGGATGTTTTA GGCATT AAC AATGTC TTTTTTAAGTCCATT MG_346 443922 - 444422 + | RNA methyltransferase MG_347 444413 - 445045 + | tRNA (guanine-N(7)-)-methyltransferase TERM 414 445169 - 445183 + T 100 -7.1 -6.11243 | opp_overlap 445169 445167 TTAAAGATTCAAAGA GCAGC AGTTA GCTGC TTTTTTTTATTAGCT MG_348 446165 - 445197 - | putative lipoprotein MG_349 446576 - 447790 + | hypothetical protein TERM 415 448583 - 448596 + G 70 -3.9 -5.03715 | opp_overlap 448583 ATTGTTTTTTGAAAA GAAAA GATG TTTTC TTTTTTAGCACTACT MG_350 447790 - 448725 + | hypothetical protein TERM 416 448922 - 448898 - T 87 -11.5 -2.99207 | opp_overlap 448898, overlap 448895 448901 TACACTACGAAATTA CAAGCTCAGTT TAA AGCTGAGCTTG TTTTATTTTTATAGT TERM 417 448898 - 448922 + T 100 -13.7 -5.3658 | opp_overlap 448898 448895 448901 TACACTACGAAATTA CAAGCTCAGTT TAA AGCTGAGCTTG TTTTATTTTTATAGT TERM 418 448919 - 448901 - T 70 -7.4 -3.63251 | opp_overlap 448898, overlap 448898 448895 ACTACGAAATTACAA GCTCAGTT TAA AGCTGAGC TTGTTTTATTTTTAT MG_521 449617 - 448943 - | hypothetical protein ppa 449665 - 450219 + | inorganic pyrophosphatase MG_352 450222 - 450722 + | recombination protein U MG_353 451048 - 450719 - | DNA-binding protein HU, putative MG_354 451197 - 451610 + | hypothetical protein clpB 453757 - 451613 - | ATP-dependent Clp protease, ATPase subunit TERM 419 453824 - 453798 - R 95 -10.3 -4.68446 | opp_overlap 453801 AAAAATTATATAAAA TTAGCACTCAA GGCAT TCGAGTGCTAA TTAAAAACTAGGTTT MG_356 454753 - 453911 - | choline/ethanolamine kinase, putative ackA 455947 - 454766 - | acetate kinase TERM 420 455762 - 455751 - G 73 -4.4 -5.09225 | AGCGCATTTAAAAAA TGCT TAAC AGCA AGATTATGATCATTA TERM 421 456175 - 456164 - H 70 -4.4 -4.8143 | opp_overlap 456164 TTAATAATGCAAAAA CAGT AGCA ACTG TATTTTTTGTATTAG ruvA 456755 - 457372 + | Holliday junction DNA helicase motor protein ruvB 457347 - 458270 + | Holliday junction DNA helicase B MG_360 459495 - 458260 - | ImpB/MucB/SamB family protein TERM 422 459042 - 459070 + g 95 -4.7 -6.12458 | opp_overlap 459042 AGATGCCAATTGAAA TTTTGATTCTCAA GTT TTGAAAAACAAAA TTTTTTATTTTTTTC TERM 423 459245 - 459267 + g 71 -7 -4.13945 | opp_overlap 459243 459245 GAATGTGCAAAAATA GCATTTGGAC ATA GTTCTAATGC TTTTAAAATAGACAT TERM 424 459787 - 459775 - g 75 -4.9 -5.1244 | opp_overlap 459775 GTAGTAAGATAAAAA TTGTT AAA AACAA TATCTTAAGACGTGC rplJ 459615 - 460103 + | 50S ribosomal protein L10 rplL 460126 - 460494 + | 50S ribosomal protein L7/L12 TERM 425 460534 - 460509 - g 73 -8.3 -3.42346 | opp_overlap 460530, overlap 460512 460530 AAGATGGCAGTACAA CAACGGCGTTC TAGT AAACACCGTCG TGATAAAAGACGTTC rpmF 460497 - 460670 + | 50S ribosomal protein L32 rpsT 460951 - 460685 - | 30S ribosomal protein S20 MG_364 461015 - 461689 + | hypothetical protein TERM 426 461737 - 461727 - g 77 -4 -5.40474 | opp_overlap 461727 ACGCTTTCAAAAAAA TGTT TAG AACA ACTTTTTTACGATAA TERM 427 462315 - 462297 - g 80 -6 -4.95302 | opp_overlap 462297, overlap 462300 TTAAACATAAGAAAA GAACAAGA ACA TCTTGATC TTAATCAGATTTACA TERM 428 462312 - 462300 - g 74 -6.3 -4.53142 | opp_overlap 462297, overlap 462297 AACATAAGAAAAGAA CAAGA ACA TCTTG ATCTTAATCAGATTT TERM 429 462370 - 462354 - g 76 -7.3 -4.33165 | TTAAACTGAGTAAAA GGTTTAG CTC CCAAACC TGGTGGTTGGTTAAG fmt 461682 - 462617 + | methionyl-tRNA formyltransferase TERM 430 464334 - 464310 - g 83 -8 -4.21194 | opp_overlap 464313, overlap 464313 TTTTACTATTGAAAA TAACTGTTTG GCTTT CAAACAGCTA AACGGTTTTTCCTCT TERM 431 464313 - 464339 + G 83 -6.6 -4.84527 | opp_overlap 464310 464313 TACTATTGAAAATAA CTGTTTGGCTTT CAA ACAGCTAAACGG TTTTTCCTCTATCAA TERM 432 464331 - 464313 - g 80 -7.5 -4.22883 | opp_overlap 464313, overlap 464310 TACTATTGAAAATAA CTGTTTG GCTTT CAAACAG CTAAACGGTTTTTCC MG_366 462619 - 464622 + | hypothetical protein rnc 465434 - 464646 - | ribonuclease III TERM 433 464767 - 464725 - G 100 -13 -5.5943 | opp_overlap 464725 464720 AAATCACTAAAAAAA TGGCTTCCTTTACTACTTTT TAA AAAACTTGTAAAAGAAGCCA TTGCGTTGTGCTCTA TERM 434 464725 - 464767 + g 85 -10.8 -3.25786 | opp_overlap 464725, overlap 464720 AAATCACTAAAAAAA TGGCTTCCTTTACTACTTTT TAA AAAACTTGTAAAAGAAGCCA TTGCGTTGTGCTCTA plsX 466410 - 465424 - | putative glycerol-3-phosphate acyltransferase PlsX MG_369 468083 - 466410 - | DAK2 domain-containing protein MG_370 469123 - 468152 - | RluA family pseudouridine synthase TERM 435 468975 - 468998 + g 75 -8.3 -3.73775 | CTTGTGTTGACCTGT GGTTTTGTT TTATTT AACAAAACC TTTCCTAAGCGTAAA MG_371 470084 - 469110 - | DHH family protein guaA 471234 - 470077 - | thiamine biosynthesis/tRNA modification protein ThiI MG_373 472066 - 471221 - | hypothetical protein MG_374 472891 - 472067 - | hypothetical protein thrS 474578 - 472884 - | threonyl-tRNA synthetase MG_376 474892 - 474578 - | hypothetical protein MG_377 475479 - 474898 - | hypothetical protein TERM 436 475398 - 475388 - G 79 -6.8 -4.63218 | TGTTGCTCAATAAAA GCAG GAT CTGC AAAAATACGATCAAC argS 477139 - 475526 - | arginyl-tRNA synthetase TERM 437 476604 - 476621 + g 95 -4.9 -6.11644 | opp_overlap 476594, overlap 476592 476606 CTATATCCATCAGGA TGTTGCT GGAT AGCAATA TTTTTTTTTAACTGC TERM 438 476606 - 476619 + g 71 -5.3 -4.70383 | opp_overlap 476594, overlap 476604 ATATCCATCAGGATG TTGCT GGAT AGCAA TATTTTTTTTTAACT TERM 439 478035 - 478002 - g 83 -10.5 -3.13164 | opp_overlap 477997, overlap 478008 TGTCCAAGCATTGAA GACAAAGTTTTTAAG TTCT CTCAAAAACCTCGTC ACCAAATTTTTGTAG TERM 440 478029 - 478008 - g 74 -6.7 -4.22009 | opp_overlap 477997, overlap 478002 AGCATTGAAGACAAA GTTTTTAAG TTCT CTCAAAAAC CTCGTCACCAAATTT gidA 477168 - 479006 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA gidB 478999 - 479577 + | methyltransferase GidB TERM 441 480227 - 480200 - g 95 -9.3 -5.16132 | CAGATCAAAATAAAA GCTACCTCAAA AACTAG TTTGAGATAGC TAAAAATATAAATGG MG_381 479570 - 480226 + | hypothetical protein udk 480691 - 481332 + | uridine kinase MG_383 482075 - 481329 - | NH(3)-dependent NAD+ synthetase, putative TERM 442 481871 - 481883 + g 74 -6.3 -4.36729 | opp_overlap 481879, overlap 481879 CAAGTTCACTAGTTG CTTGA AAA TCAAG TTTTGAATTATTAAT TERM 443 481932 - 481918 - G 72 -7.2 -3.87551 | overlap 481931 ATTATTAAAGCTAAA TGGTTT TCA AAACCA AAAGTTTCTTTAGCA obgE 483369 - 482068 - | GTPase ObgE MG_524 483818 - 483369 - | hypothetical protein TERM 444 483699 - 483688 - G 70 -4.4 -4.90906 | overlap 483696 GTAGAATAGCAAAAA GGAA TTAA TTCC CAAATAATGTATTTA TERM 445 483922 - 483955 + r 82 -2.6 -5.96894 | gap 1, overlap 483914 AAAACTAAAAAGAAA CTAAAACTTCCTATT AGTCA ATTAGGG-GTTTTAG TTTTTTTATTTGACT MG_385 484699 - 483989 - | glycerophosphoryl diester phosphodiesterase family protein MG_386 489552 - 484702 - | P200 protein TERM 446 487086 - 487107 + g 90 -8.1 -4.85177 | gap 1, overlap 487058 487087 CTTTGAAAGTAGGTT G-GAGTTCTG AAT CAGAACTCTC TTTTTCGTCTGGTTT TERM 447 487087 - 487105 + g 100 -11.8 -4.02905 | overlap 487058 487086 TTTGAAAGTAGGTTG GAGTTCTG AAT CAGAACTC TCTTTTTCGTCTGGT TERM 448 487122 - 487148 + g 75 -9.7 -2.97588 | overlap 487120 487127 CTTTTTCGTCTGGTT TTGAATCAAAT AAAGC ATTTGATTCAA TGATTTCAGTTAAAT TERM 449 487578 - 487589 + g 77 -4.4 -5.15634 | GTGGTTCACTTTCTA CAAC TATT GTTG TTTTTTCATCAAATA era 490711 - 489839 - | GTP-binding protein Era TERM 450 490053 - 490074 + g 74 -7.5 -3.8646 | AACAAGTTTTTTTCT TTATTGAAA CTCT TTTCAATAA TTTCAATTCTTGCTA MG_388 491163 - 490699 - | hypothetical protein MG_389 491530 - 491147 - | hypothetical protein TERM 451 491266 - 491280 + g 76 -3.6 -5.35224 | opp_overlap 491266 TCAATTCTGATGAAA TTTCTG ATG TAGAAA TTTTCTTTTTGTAAA MG_390 493516 - 491534 - | ABC transporter, ATP-binding/permease protein TERM 452 491948 - 491908 - G 74 -6.4 -4.38927 | gap 1, opp_overlap 491909 491920 491922, overlap 491920 CCTTTAGATAATAAA CGTTTTCAAAAAGCTGTTC TTTT GAACATCTTTTT-AAATCG ACGTTATTAAATTTA TERM 453 492911 - 492898 - G 74 -6.7 -4.18506 | opp_overlap 492898 TTAGTTGCAAAATAA CTTGC AAAA GCAAG TTTAATCCCTTTAGA MG_391 494967 - 493624 - | leucyl aminopeptidase TERM 454 494935 - 494925 - G 74 -5.4 -4.91712 | opp_overlap 494901, overlap 494905 494930 TTGAACTCACAAAAA CAAC TGT GTTG CTATCATCACTAAAA groEL 496615 - 494984 - | chaperonin GroEL TERM 455 495100 - 495116 + g 70 -7.3 -3.63068 | opp_overlap 495109, overlap 495096 TTTTAGTTACTTTGG TGGGATC AAT GATTCCA TTTGCAATCATATCA groES 496960 - 496628 - | co-chaperonin GroES TERM 456 496764 - 496780 + g 80 -5.2 -5.28983 | opp_overlap 496762 496764 ATAATATCACCAACA CCAAAA GCATA TTTTGG TTTTTCTGTTTTGCC glyA 498306 - 497086 - | serine hydroxymethyltransferase MG_395 499890 - 498316 - | putative lipoprotein MG_396 500719 - 500261 - | ribose-5-phosphate isomerase B MG_397 502420 - 500720 - | hypothetical protein TERM 457 502390 - 502378 - G 72 -4.9 -4.8269 | GATAAGCACCAAAAA TTACT AGT AGTAA GAAAGGGAGCAAGAT atpC 502823 - 502422 - | F0F1 ATP synthase subunit epsilon TERM 458 502596 - 502574 - G 72 -5 -4.77036 | opp_overlap 502577 502579, overlap 502579 CTTCATCAGCAAAAA CAAAATTTTC TGT GAAAATCTTA GCTTCTGTTTTTTTA TERM 459 502591 - 502579 - G 79 -4.9 -5.3104 | opp_overlap 502579 502577, overlap 502574 TCAGCAAAAACAAAA TTTTC TGT GAAAA TCTTAGCTTCTGTTT atpD 504258 - 502828 - | F0F1 ATP synthase subunit beta atpG 505099 - 504260 - | F0F1 ATP synthase subunit gamma atpA 506655 - 505099 - | F0F1 ATP synthase subunit alpha atpH 507201 - 506671 - | F0F1 ATP synthase subunit delta atpF 507820 - 507194 - | F0F1 ATP synthase subunit B atpE 508131 - 507823 - | F0F1 ATP synthase subunit C atpB 509012 - 508134 - | F0F1 ATP synthase subunit A MG_406 509454 - 508978 - | hypothetical protein TERM 460 509430 - 509396 - GR 70 -7.4 -3.66301 | opp_overlap 509396 AGTACAAATAACCAA GCTACAAAAATAATTA AGG TAATAATTTTTGCAAC CTTTCTATTGTTTCA eno 510836 - 509460 - | phosphopyruvate hydratase TERM 461 511003 - 511021 + G 83 -10.4 -3.30635 | TTGGTTATCTCAACT CTAGGATT AGA AATCCTAG TTATGAGCAGGTTTG pmsR 510903 - 511376 + | methionine sulfoxide reductase A MG_409 512050 - 511373 - | phosphate transport system regulatory protein PhoU, putative pstB 513042 - 512053 - | phosphate ABC transporter, ATP-binding protein TERM 462 512742 - 512758 + g 77 -4.5 -5.24796 | TGTCAAGATTGATAT CAAATAA TAC TTGTTTG TTTTTGTTATATCAG pstA 514991 - 513027 - | phosphate ABC transporter, permease protein PstA MG_412 516124 - 514991 - | phosphate ABC transporter, substrate-binding protein TERM 463 515578 - 515559 - G 72 -3.5 -5.30575 | GAAAAATTTAAAAAA GCTTCTG CTGTTC CTGAAGC AAATGACCCACCAGT MG_414 519355 - 516245 - | hypothetical protein TERM 464 517710 - 517699 - G 70 -4.4 -4.7497 | opp_overlap 517692 517688 TTGATCTATCAAAAA TGGT TTTG ACCA TTCTTGGTAAATTTC MG_525 521414 - 519420 - | hypothetical protein TERM 465 519680 - 519690 + g 71 -5.4 -4.68512 | ACTTAAGCTCATTTT TCAG TTT CTGA TTATTTTTCTTATCA TERM 466 519925 - 519935 + g 70 -4 -5.02777 | opp_overlap 519903 519925 TCTTTAGGAAAAAGA TCTA AGC TAGA TTTCTTTTTATCTAT TERM 467 520666 - 520677 + g 71 -3 -5.28683 | opp_overlap 520666 GACTTAAAAAAAGAA TCAA CTGG TTGA TTTTTTAATGTTCAT TERM 468 521231 - 521215 - G 77 -8.1 -3.77196 | opp_overlap 521218 521219, overlap 521218 521219 GGATTAGCTATTAAA GAATTTG AAT CAAATTC AATTTGGTTAACAAT TERM 469 521466 - 521484 + r 71 -7.6 -3.41229 | TTAAGTGACAGTTTT TTTACTAA CGC TTAGTAAA TTGTGGTGCACGTCT rpsI 521868 - 521470 - | 30S ribosomal protein S9 rplM 522314 - 521874 - | 50S ribosomal protein L13 MG_419 524145 - 522352 - | DNA polymerase III subunits gamma and tau uvrA 527015 - 524151 - | excinuclease ABC subunit A MG_422 529494 - 526987 - | hypothetical protein TERM 470 528857 - 528833 - GR 74 -2.9 -5.43866 | TAACGCTCAAAAAAA CTTTTTATTAC TTT GTTATTAAAAG TAAATAATTGATTGA TERM 471 529050 - 529028 - GR 76 -9.4 -3.13403 | overlap 529026 GTTTTTTGATTAACA TTTTCAATTT TCA AAATTGAAAA CCTAAATAAATCATT MG_423 531217 - 529532 - | hypothetical protein rpsO 531480 - 531220 - | 30S ribosomal protein S15 TERM 472 532334 - 532348 + G 72 -7.2 -3.83378 | opp_overlap 532334 532333 532330, overlap 532334 TAATGATAAACTAAT CAAACA ATT TGTTTG TTATCTATTTTCAGA deaD 531669 - 533018 + | DEAD-box ATP dependent DNA helicase TERM 473 533075 - 533053 - g 72 -2.6 -5.44119 | overlap 533059 TGTATGGCAAAAAAA GACCAACTTA CCT TAAGAGGGCC TTTGTATGGCAATAA rpmB 533041 - 533235 + | 50S ribosomal protein L28 MG_427 533271 - 533696 + | OsmC-like protein TERM 474 533738 - 533719 - f 75 -5 -4.95854 | opp_overlap 533719 TAAAAAAGCGAAAAA TACCTGTA ATTT TGCAGGTA TTTTTTTATTTAAAA TERM 475 533719 - 533738 + F 100 -7.2 -5.95539 | opp_overlap 533719 TAAAAAAGCGAAAAA TACCTGTA ATTT TGCAGGTA TTTTTTTATTTAAAA MG_428 533807 - 534322 + | LuxR regulatory protein, putative ptsI 536037 - 534319 - | phosphoenolpyruvate-protein phosphotransferase TERM 476 535289 - 535305 + g 82 -5.1 -5.4593 | opp_overlap 535291, overlap 535291 TTTAATTCATTTTGA AAGTTGG ATT CCAACTC TTTTTCTTGTTTTCA TERM 477 535303 - 535291 - G 73 -7.7 -3.58269 | opp_overlap 535289 535291 TAATTCATTTTGAAA GTTGG ATT CCAAC TCTTTTTCTTGTTTT TERM 478 535291 - 535303 + g 80 -7.7 -4.32946 | opp_overlap 535291, overlap 535289 TAATTCATTTTGAAA GTTGG ATT CCAAC TCTTTTTCTTGTTTT TERM 479 535927 - 535939 + g 74 -6.3 -4.42491 | TTTTGCTTGGGTGGG TGTCA TTT TGACA TTTGTGTATTTTTTA pgm 537564 - 536041 - | phosphoglyceromutase tpiA 538291 - 537557 - | triosephosphate isomerase TERM 480 537765 - 537781 + g 70 -7.3 -3.71913 | overlap 537763 TTAATGGTTTGATTT GCAACTT CAG GAGTTGC TGTTTTACCTGTCCC TERM 481 538234 - 538201 - G 77 -9.1 -3.35813 | overlap 538217 TGGCATTGTAATTAA GTTTATTTTGTTGAA ATTG TTCAACAAAACTAAC TGCGTCTTTTAAATT MG_432 539547 - 538351 - | hypothetical protein TERM 482 540319 - 540295 - g 74 -5.2 -4.89521 | overlap 540297 540309 AGAGGTTAAAGAAAA TCCTAAAAAA GCAAT TTTTTTAGAA AAAACTATTGAAGGT tsf 539633 - 540529 + | elongation factor Ts TERM 483 540896 - 540906 + G 76 -5.4 -5.0538 | opp_overlap 540896 AGCTTTTGAAGAGAA TGAC TTT GTCA TTTTTTCAGGTGGCA TERM 484 541066 - 541044 - g 70 -4.2 -5.0538 | GCTGATCCTAAAAAA GATAAAAATG CAA CCTTTTTACC AACACTCAACTATGA pyrH 540510 - 541241 + | uridylate kinase frr 541241 - 541792 + | ribosome recycling factor TERM 485 542128 - 542104 - g 71 -2.9 -5.28755 | AAACATACTAAAAAA TAAACCAAAAC TAA GCTTAAGTTTA ACGTTGTTAAATGCT TERM 486 542656 - 542666 + G 75 -2.6 -5.64006 | TGATAGCCATAATCT TATT ACC AATA TTTTTTTAATTGCCT MG_437 541793 - 542986 + | phosphatidate cytidylyltransferase TERM 487 544075 - 544065 - g 84 -5.4 -5.49569 | opp_overlap 544065 GACCAATATAAAAAA GAAC TAA GTTC TTTAACAGTGATTCG MG_438 543006 - 544157 + | type I restriction modification DNA specificity domain-containing protein MG_439 545380 - 544562 - | putative lipoprotein TERM 488 545063 - 545080 + g 70 -7.1 -3.68025 | TAAACCTTTTGCACT GATGTTA GGAG TAACATC TTCCTTTGATTTATT MG_440 546156 - 545380 - | putative lipoprotein MG_441 546709 - 546299 - | hypothetical protein TERM 489 546360 - 546339 - G 74 -3.1 -5.50499 | opp_overlap 546352, overlap 546352 CTATACTTAAAAAAA CAAAAATAA TCAC TTAATTTTG AATTAATAACTTCTT rbgA 547692 - 546880 - | ribosomal biogenesis GTPase TERM 490 547454 - 547476 + gr 87 -8.6 -4.29304 | opp_overlap 547439 547454 GGTTCTTTTAATGAA CCAAATAAGA TCT TTTTATTTGG TTTGTATTGTGCTAA TERM 491 547629 - 547639 + gr 74 -5.4 -4.8048 | ATAACTTTTTTAATT GATC ATG GATC TTTTTCATGTGACCC MG_443 548851 - 547664 - | hypothetical protein rplS 549226 - 548867 - | 50S ribosomal protein L19 trmD 549905 - 549210 - | tRNA (guanine-N1)-methyltransferase rpsP 550192 - 549905 - | 30S ribosomal protein S16 TERM 492 550473 - 550497 + r 100 -13.1 -3.31183 | opp_overlap 550471 550470 AATGATGAAATAGTT GTTTTGCTATT CAC AATAGCAAAAC TTAAATTTGAATTAT TERM 493 550549 - 550578 + r 76 -3.7 -5.40004 | opp_overlap 550552, overlap 550552 CAATATGTTCTTCTC AAATTAACCTATA TTTT TATCGGTTAATTC TTTTTTAATTTCATA TERM 494 550552 - 550575 + r 74 -5.4 -4.76088 | opp_overlap 550552, overlap 550549 TATGTTCTTCTCAAA TTAACCTATA TTTT TATCGGTTAA TTCTTTTTTAATTTC MG_447 552446 - 550803 - | hypothetical protein TERM 495 551362 - 551348 - G 73 -4.3 -5.09521 | GTAATAAACCAAAAA TAGCT GCTGA AGCTA AATTACTAATAGCAA TERM 496 551976 - 551966 - G 74 -5.4 -4.89567 | TTGCAAAAGATAAAA CCAA AAA TTGG GTAATTAGTCCAAAT TERM 497 552088 - 552074 - G 76 -6.4 -4.72201 | CTTTAGAAAAAATAA CTCCAG TTC CTAGAG GAATAAAAATATTAA MG_448 552899 - 552447 - | methionine sulfoxide reductase B MG_450 554430 - 553558 - | degV family protein TERM 498 554430 - 554420 - G 74 -3.2 -5.32565 | overlap 554412 GAATCAACTAAAAAA GCGA TCC TCAC TATTCTAGAACTTCT tuf 555614 - 554430 - | elongation factor Tu MG_452 555667 - 556452 + | hypothetical protein TERM 499 556471 - 556458 - g 74 -3.8 -5.18715 | ACAAAAATAAGAAAA GCAG TTATTC CTGC TGCTGGGTTGGGTGT TERM 500 556713 - 556736 + G 88 -6.2 -5.4505 | gap 1, opp_overlap 556713 556735 CATAAAGAGATTGAA GATAT-TGCTA ATT TAGCACATATC TTTTTTGTTAGACAA gtaB 556437 - 557315 + | UTP-glucose-1-phosphate uridylyltransferase MG_454 557772 - 557305 - | OsmC-like protein tyrS 557759 - 558949 + | tyrosyl-tRNA synthetase MG_456 559943 - 558939 - | hypothetical protein TERM 501 559307 - 559335 + g 80 -7.6 -4.20084 | TTGAATCTTTTTCAA CAAAAAGTGAGA TGTTT TCTTGCTTTTTG TTTTCAGTAAGTGCT TERM 502 560179 - 560195 + r 72 -3.7 -5.19212 | AAATTCGTTTTTGTC CTAAACT AAT AGTTTTG TTTTTTAGTAATACT ftsH 562604 - 560496 - | ATP-dependent metalloprotease FtsH TERM 503 562520 - 562508 - G 70 -6.3 -4.32048 | TAACAACAGCTAAAA TGATG ACT CATCA AAAGACTTTTCAAGC hpt 563309 - 562782 - | hypoxanthine phosphoribosyltransferase MG_459 563820 - 563311 - | hypothetical protein ldh 563993 - 564931 + | L-lactate dehydrogenase/malate dehydrogenase MG_461 566205 - 564928 - | HD domain-containing protein TERM 504 564989 - 565043 + g 74 -2.2 -5.67529 | overlap 565020 AAAAATAACTCGTTA CTTCTCTTAACAAGCATACTAATTTC ACT GAGATTTTTAATCTTGTTTTGAGAAG TTTTTATTTTTAATT gltX 567640 - 566186 - | glutamyl-tRNA synthetase ksgA 568406 - 567627 - | dimethyladenosine transferase TERM 505 568045 - 568028 - G 87 -8.5 -4.25104 | opp_overlap 568027 568028 TTTGTGTCATTAAAA CAAAGCT TCGA AGCTTTG ATTCTAAAAACTTAT MG_464 569556 - 568399 - | putative inner membrane protein translocase component YidC rnpA 569914 - 569528 - | ribonuclease P protein component TERM 506 569585 - 569599 + gr 83 -5.8 -5.31519 | CCGCTTTAATAGTTG CAAAAA AAG TTTTTG TTTTTCTTTAAATGT rpmH 570029 - 569883 - | 50S ribosomal protein L34 MG_467 570990 - 570055 - | ABC transporter, ATP-binding protein MG_468 576345 - 570994 - | ABC transporter, permease protein TERM 507 575188 - 575202 + g 80 -7.2 -4.65933 | TTTTAGTTCAAATTT CTTAAG TTG CTTAAG TTTATTTTCAAGATC TERM 508 575755 - 575741 - G 76 -7.2 -4.33708 | AAACCATCAGCAAAA TAACCT AGA AGGTTA CCACTAGCATCATAA TERM 509 575925 - 575946 + g 74 -6 -4.59653 | opp_overlap 575925 575924 ATGCTTTTAAAATAC CTCTTTTT CTTGCT AAAAAGAG TTTATCTTTTTCATT MG_526 577205 - 576351 - | ABC transporter, ATP-binding protein dnaA 578581 - 577268 - | chromosomal replication initiation protein TERM 510 578724 - 578744 + r 72 -2.5 -5.49568 | opp_overlap 578729, overlap 578721 578707 578726 578727 GTTTTTCTTGGCGTT CAACAGGAA CTA TTCCTGGTA TTTTTGTTTTAGGTT TERM 511 578727 - 578741 + r 74 -8.6 -3.20051 | opp_overlap 578729, overlap 578721 578707 578726 578724 TTTCTTGGCGTTCAA CAGGAA CTA TTCCTG GTATTTTTGTTTTAG TERM 512 579055 - 579088 + r 71 -2 -5.34655 | gap 1, opp_overlap 579053, overlap 579053 579044 AAATGAAGATGAATC TTTGTCAAA-AGA TGTTTCTTC TCTTTTTGACAAA TTTTGTTTTTGATTA soj 580033 - 579224 - | CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein TERM 513 579268 - 579289 + g 71 -3.1 -5.30155 | overlap 579270 GGATTTCTTTTGTTA TTTCTAAAT ACTC ATTTAGATA TTTTTTACTTGGTGA