TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.710955 %AT, 692947 nt, 4830 terms. Intergenic: 0.741653 %AT, H2T: 69287 nt, 624 terms; T2T: 23314 nt, 638 terms; H2H: 15363 nt, 406 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|71894025|ref|NC_007294.1| Mycoplasma synoviae 53, complete genome (length 799476) TERM 1 242 - 295 + G 89 -6.5 -5.38326 | gap 1, opp_overlap 242 256, overlap 256 ATTTATACTAGAAAA TTATCAGGATTTAA-TTTTTAGGTTT TTT AAATCTAAAAATTTTAAGCTTGATAA TTTTTATTTAATTCA TERM 2 256 - 280 + G 80 -8.1 -4.20696 | opp_overlap 256 242, overlap 242 ATTATCAGGATTTAA TTTTTAGGTTT TTT AAATCTAAAAA TTTTAAGCTTGATAA dnaA 57 - 1427 + | chromosomal replication initiator protein TERM 3 2114 - 2092 - g 70 -5 -4.68528 | opp_overlap 2097 2113, overlap 2097 AAAGGTAAAAAAGAA GAAAATAAAA TTG TTTTATATTC AACTAACTTTAGTAG TERM 4 2109 - 2097 - g 72 -3.5 -5.22104 | opp_overlap 2097, overlap 2092 TAAAAAAGAAGAAAA TAAAA TTG TTTTA TATTCAACTAACTTT dnaN 1582 - 2715 + | DNA polymerase III beta subunit MS53_0003 2722 - 2937 + | hypothetical protein TERM 5 2939 - 2963 + T 90 -5.8 -5.50313 | opp_overlap 2939 2945 2946, overlap 2945 TCGAAAAAGAATAAT GAAAAAGCCA AAAGA TGGCTTTTTG TTTTTTAATTTTATC TERM 6 2957 - 2945 - T 74 -4.8 -5.03201 | opp_overlap 2939 2945, overlap 2939 2946 AAGAATAATGAAAAA GCCA AAAGA TGGC TTTTTGTTTTTTAAT TERM 7 2945 - 2957 + T 86 -4.8 -5.77571 | opp_overlap 2945 2939 2946, overlap 2939 AAGAATAATGAAAAA GCCA AAAGA TGGC TTTTTGTTTTTTAAT polC 7329 - 2974 - | DNA polymerase III PolC TERM 8 4524 - 4544 + g 74 -6.9 -4.39226 | overlap 4521 TAGGACAATTTTTGT CATCAAGAT CGT ATCCTGATG TTATTTTGTCGTTAT TERM 9 5540 - 5528 - G 75 -3.5 -5.4433 | ATATATAAAGAAAAA TATTT TGA AAATA ATGCATCTGATTTAT TERM 10 5654 - 5664 + g 79 -6.8 -4.7173 | opp_overlap 5652 5654 TCTGTATCATAAAGA GCTC TAT GAGC TTTTTCGGTATCGTA TERM 11 6555 - 6539 - G 73 -8.1 -3.37796 | TTTGATGATTTAGAA GCAATTA GTT TAATTGC ATCATCATAATCAGT TERM 12 6667 - 6679 + g 70 -6.3 -4.17274 | TTCTTTTTCTAGTGA CGAAA AGT TTTCG TTTAATTCTTTGATT TERM 13 6758 - 6774 + g 74 -8.1 -3.67843 | opp_overlap 6750, overlap 6761 GAAAAAGTTGAAGGT GAATTTG TTT CAAATTC TTCTTGAAAGTTTTG TERM 14 6830 - 6804 - G 70 -5.2 -4.4836 | opp_overlap 6818 6820 GAACAAAATTTAAAA CTGATGATTC TATATCT GATTCATCAG AATTATTTGCACTAT TERM 15 7185 - 7166 - G 84 -3.6 -5.81622 | ATAAAAGCAAAAAAA TCATTTAC AGTA GGAAATGA ATCAAGCTCAAAAGA cdsA 8406 - 7336 - | phosphatidate cytidylyltransferase TERM 16 8054 - 8028 - G 100 -6.1 -5.80951 | gap 1 AGTTAAAATAAAAAA CAGAAAAC-ATT GATA AATAGTTTTCTG ATAATGCAAATTTTT TERM 17 8349 - 8368 + g 75 -3.6 -5.49568 | opp_overlap 8350, overlap 8350 TGAATGCAGGTAAAA TTCTTTGT TGAA ACAAGGAG TTTTTATTTTCAGTT MS53_0006 9146 - 8415 - | hypothetical protein TERM 18 8611 - 8657 + g 71 -4.6 -4.86862 | opp_overlap 8620 8621, overlap 8593 8614 TCAAGAGCATCTTGA GTGTTTAAATTTCACAGTGAAA CAT TTTCTTTGTGAAGCTTAAATCC TTTTAGTTTTTTAGC TERM 19 8727 - 8739 + g 72 -6.3 -4.36914 | opp_overlap 8738 TGCTATTATTGCTCC GCTAA AAT TTAGC TTTTCTAGAAGAAGA TERM 20 9000 - 9014 + g 84 -5.8 -5.25803 | overlap 8997 9003 AAATAAATTAAATTT GTATTT TGC AAATAC TTTTTTGTAAAAGTT TERM 21 9045 - 9065 + g 74 -4.9 -5.08169 | opp_overlap 9045, overlap 9060 TTCAAAATATGAAAT TTTAAAATA TTT TGTTTTAAA TTTTTTAAGCTCTAT MS53_0007 10297 - 9143 - | putative pantothenate metabolism flavoprotein TERM 22 9220 - 9198 - G 78 -9.4 -3.13504 | opp_overlap 9197 9196 9200 9219, overlap 9195 9196 9219 TCTTTAGCAAAATCA TATTTTGAAA CAT TTTCAAAATA AATTTCATTTAAATT TERM 23 9753 - 9775 + g 80 -6.4 -4.85782 | opp_overlap 9753 GGGCTTTTGGTATAA CCAAAACT TAAAAGC AGTTTTGG TTTATTTTTACCAAA TERM 24 9895 - 9921 + g 73 -8.3 -3.41587 | overlap 9899 TGTGACCGTATTTTT TTAATTTAGAA ACGTG TTCTAAATTAA TTGGATTTTCTCACA TERM 25 10204 - 10252 + g 71 -7.1 -3.76641 | opp_overlap 10221 10234, overlap 10210 TAGATAAGACAATTG TTATTTGATTTTTAGAATCTTTT TTT AAAAGATTTAAAAAATCACCTAA TTTAACTATTGCAAT TERM 26 10210 - 10222 + g 71 -2.7 -5.41746 | opp_overlap 10221, overlap 10204 AGACAATTGTTATTT GATTT TTA GAATC TTTTTTTAAAAGATT TERM 27 10408 - 10431 + G 70 -8.2 -2.99471 | GCCTTATTCCTTATA TTGGGCTAAT TACC ATTGGCCCAG TGTCTATAAACATCA TERM 28 10731 - 10747 + G 73 -5.2 -4.63218 | opp_overlap 10731 TTATTTTTACATAAT GCAATT TCTAC AATTGC TTTTATTGGAGAGAG MS53_0008 10320 - 10919 + | hypothetical protein TERM 29 11557 - 11529 - T 100 -6.1 -5.95166 | TGTAATGAAAAAAAA CGAATACACCT ATAAATA AGACGTATTCG TTCCCATATTGTAAA TERM 30 11612 - 11629 + T 85 -4.2 -5.88565 | opp_overlap 11612 CAATATGAAAAAAAA GATCAA AATTAA TTGATC TTTTTTTATTCTAAC TERM 31 11629 - 11612 - T 85 -4.2 -5.94597 | opp_overlap 11612 CAATATGAAAAAAAA GATCAA AATTAA TTGATC TTTTTTTATTCTAAC TERM 32 11904 - 11928 + T 77 -5.7 -4.77719 | opp_overlap 11906, overlap 11905 11906 AGGCGTAAAAAATAA AAGCCGATTTT TTA AAAATCGGCAA TTTTATTAAATTTTG TERM 33 11905 - 11927 + T 77 -9.2 -3.45005 | opp_overlap 11906, overlap 11904 11906 GGCGTAAAAAATAAA AGCCGATTTT TTA AAAATCGGCA ATTTTATTAAATTTT TERM 34 11926 - 11906 - T 100 -12.7 -5.42198 | opp_overlap 11905 11904 11906 GCGTAAAAAATAAAA GCCGATTTT TTA AAAATCGGC AATTTTATTAAATTT TERM 35 11906 - 11926 + T 95 -12.7 -2.65376 | opp_overlap 11906, overlap 11905 11904 GCGTAAAAAATAAAA GCCGATTTT TTA AAAATCGGC AATTTTATTAAATTT eno 13369 - 12011 - | phosphopyruvate hydratase TERM 36 12236 - 12255 + g 80 -8 -4.20368 | GTTTGCCATTTGTGC CATTTGAA TAGC TTCAAATG TTTCTGTTAAGCTAC TERM 37 13032 - 13042 + g 80 -4 -5.63012 | ACTCCTAAAATAGCG TTAG CTC CTAA TTTTTCTTTGTTTTT TERM 38 13251 - 13225 - G 71 -8 -3.17392 | opp_overlap 13213, overlap 13248 TATCTCTTAATTCAA GAGCTTCTCTTG ATC CAGTAGAAGCTC CTGATGGAACCATTG rpsP 13509 - 13763 + | 30S ribosomal protein S16 TERM 39 14063 - 14046 - g 82 -6.3 -5.15634 | opp_overlap 14034, overlap 14034 TATTTGACCAAAAAA TGGCCAA TAAA TTAGCCA AATACGATCAAATAA trmD 13760 - 14446 + | tRNA (guanine-N1)-methyltransferase TERM 40 14674 - 14694 + G 91 -9.9 -4.3208 | TTCCAACAAATTCGC CTTCAATTT CTC AAATTGAAG TTTTACGTTCTAACA rplS 14448 - 14789 + | 50S ribosomal protein L19 TERM 41 14800 - 14811 + F 90 -5.8 -5.52909 | opp_overlap 14790 14791 AATAATTAAAAAACC CCCA ATTT TGGG TTTTTTTACATCTTA TERM 42 14923 - 14913 - g 95 -4 -6.34616 | TTAAAATAAAAAAAA TAGT TTT ACTA GAAGGCGAATTAGGT MS53_0013 14828 - 15226 + | hypothetical protein TERM 43 15600 - 15578 - g 74 -5.1 -5.02357 | opp_overlap 15578, overlap 15573 CACAAGGAAATAAAA TTTATTTTT TTAGT AAAAATAAA TTTTTAGAAACTGGC MS53_0014 15223 - 15795 + | hypothetical protein TERM 44 16236 - 16224 - g 72 -4.9 -4.87389 | TACGCTAAAAACAAA TTTGA TTT TCAAA TAGTCGGAGAAACTT TERM 45 16474 - 16500 + G 76 -8.8 -3.65446 | opp_overlap 16474 16497, overlap 16470 AAAGCATTGAACAAA TTGCAGCTTCTT TTC AAGAAGTAGCAA TTAATTATTTAATTG TERM 46 16500 - 16474 - g 72 -6.6 -4.23647 | opp_overlap 16474 16470, overlap 16497 AAAGCATTGAACAAA TTGCAGCTTCTT TTC AAGAAGTAGCAA TTAATTATTTAATTG gcp 15789 - 16712 + | O-sialoglycoprotein endopeptidase TERM 47 16726 - 16706 - T 89 -4.1 -6.00814 | opp_overlap 16706 AAGAATGAAAAAAAA TAGCTAA TTATCCC TTAGCTA ATTTTTTTGACAATT MS53_0016 17258 - 16713 - | hypothetical protein TERM 48 17178 - 17161 - G 85 -7.1 -4.9218 | opp_overlap 17161 CATGGATTATAAAAA GCAATTT TATT AAATTGC TGGCTTCTTTTTAAA MS53_0017 18163 - 17258 - | hypothetical protein TERM 49 18022 - 18002 - G 77 -5.5 -5.1167 | opp_overlap 18001 AACTGAATATAAAAA TCTTTCTTT TTT AAAGACAGA ATATGTAAGTGAATT MS53_0018 19317 - 18163 - | hypothetical protein def 19900 - 19340 - | putative polypeptide deformylase MS53_0020 19920 - 20624 + | hypothetical protein TERM 50 20723 - 20707 - g 100 -9.5 -4.6759 | opp_overlap 20706 20708, overlap 20697 AATATTCTAAGAAAA CTCTTCT TAA AGAAGAG GATATTTTAGAAATA TERM 51 21816 - 21781 - g 86 -10.8 -2.87261 | overlap 21776 TAAAAACTTATCAGA TTCTTCTTTCTTCAAT GACA ATTAAAGAAAGAAAAA ATCCAAAGTTATTAA ffh 20649 - 22016 + | signal recognition particle TERM 52 22016 - 22040 + T 71 -8.7 -2.8704 | opp_overlap 22022, overlap 22022 22036 TGGTGGAATGTTTTA AAAAAAGTGCA ATT TGCACTTTTTA ATTTAAAATTTTCTT TERM 53 22022 - 22034 + T 90 -7.7 -4.99134 | opp_overlap 22022, overlap 22016 AATGTTTTAAAAAAA GTGCA ATT TGCAC TTTTTAATTTAAAAT TERM 54 22034 - 22022 - T 95 -7.7 -5.41746 | opp_overlap 22016 22022 AATGTTTTAAAAAAA GTGCA ATT TGCAC TTTTTAATTTAAAAT uvrA 24893 - 22038 - | excinuclease ABC subunit A TERM 55 22221 - 22211 - G 74 -6.8 -4.30576 | opp_overlap 22211 GCTCTATTACTAAAA CGGT ATC ACCG TTATCTACTATTCTA TERM 56 24264 - 24293 + g 72 -5.1 -4.8245 | opp_overlap 24266 24267, overlap 24266 24267 24284 ATTTTCATTTAAAAC AACTCTATTGACA ATAA TGTCAATAGAATA TTTATTGTTTTTATT TERM 57 24266 - 24291 + g 75 -7.7 -3.97569 | opp_overlap 24266 24267, overlap 24264 24267 24284 TTTCATTTAAAACAA CTCTATTGACA ATAA TGTCAATAGAA TATTTATTGTTTTTA TERM 58 24291 - 24266 - G 91 -9.9 -4.21812 | opp_overlap 24266 24264 24267 24284, overlap 24267 TTTCATTTAAAACAA CTCTATTGACA ATAA TGTCAATAGAA TATTTATTGTTTTTA TERM 59 24267 - 24290 + g 91 -11.2 -2.96101 | opp_overlap 24266 24267, overlap 24266 24264 24284 TTCATTTAAAACAAC TCTATTGACA ATAA TGTCAATAGA ATATTTATTGTTTTT TERM 60 24290 - 24267 - G 91 -11.2 -3.12605 | opp_overlap 24267 24266 24264 24284, overlap 24266 TTCATTTAAAACAAC TCTATTGACA ATAA TGTCAATAGA ATATTTATTGTTTTT TERM 61 24284 - 24300 + g 76 -4.5 -5.29846 | opp_overlap 24267 24266, overlap 24267 24266 24264 TATTGACAATAATGT CAATAGA ATA TTTATTG TTTTTATTTAAAGTT glpQ 25667 - 24936 - | glycerophosphoryl diester phosphodiesterase TERM 62 25182 - 25195 + g 71 -2.5 -5.47218 | opp_overlap 25174, overlap 25174 25173 25186 TAAATAACCAAGTTT TAAAT TTGG ATTTA TTTTTTTAAGTAAAA TERM 63 25802 - 25790 - R 75 -7.7 -4.17878 | TTAAATGAAAGTAAA GTTGC TAT GCAAC AAACAGTTTTTCGAA TERM 64 25854 - 25894 + r 82 -6.6 -5.08255 | gap 1, opp_overlap 25854 TAATTTTATAAATAA TAAAAAAACATAAAACAGA TTCG TCTCTT-TATGTTTTTTTA TTTTATTTTAAAAAT TERM 65 25894 - 25854 - R 84 -8.8 -4.08948 | gap 1, opp_overlap 25854 TAATTTTATAAATAA TAAAAAAACATAAAACAGA TTCG TCT-CTTTATGTTTTTTTA TTTTATTTTAAAAAT TERM 66 26172 - 26144 - R 86 -3.9 -6.15536 | opp_overlap 26165 26171, overlap 26163 26164 AATGAAGAAAAAAAA CGAATACATCT ATAAATA AGGCGTATTCG TTCCCACATTGTAAC TERM 67 26216 - 26163 - R 80 -7.8 -4.10188 | gap 2, opp_overlap 26165 26171 26212, overlap 26144 26164 26212 TACATCTATAAATAA GGCGTATTCGTTCCCACATTGTAACT TCCA AGTTACAATGTGGGAA-AATTAC-CT TTGTAGGTACTTTTT TERM 68 26215 - 26164 - R 85 -11.3 -3.0539 | gap 2, opp_overlap 26165 26171 26212, overlap 26144 26163 26212 ACATCTATAAATAAG GCGTATTCGTTCCCACATTGTAACT TCCA AGTTACAATGTGGGAA-AATTAC-C TTTGTAGGTACTTTT TERM 69 26165 - 26215 + r 83 -9.3 -3.96827 | gap 1, opp_overlap 26144 26164 26163 26212, overlap 26171 26212 CATCTATAAATAAGG CGTATTCGTTCCCACATTGTAACT TCCA AGTTACAATGTGGGAAA-ATTACC TTTGTAGGTACTTTT TERM 70 26171 - 26210 + r 100 -13.8 -3.33711 | opp_overlap 26144 26164 26163, overlap 26165 TAAATAAGGCGTATT CGTTCCCACATTGTAACT TCCA AGTTACAATGTGGGAAAA TTACCTTTGTAGGTA rpiR 27085 - 26237 - | transcriptional regulator TERM 71 27106 - 27092 - H 75 -4.4 -5.24129 | opp_overlap 27085 27092 27100, overlap 27099 27100 TTTTTTCATAAAAAA TTAAAA ATT TTTTAA ATTTTTTTAAAAATT TERM 72 27226 - 27184 - H 77 -5.2 -5.06411 | opp_overlap 27188 27189 27192, overlap 27188 27192 ACAAAATAAAATAAA TACATTAATTTTTTTGTAAA TTT TTTACAAAAAAATTGCTTTA ACGCCTAAAAAATGG TERM 73 27188 - 27222 + H 74 -8.2 -3.55444 | opp_overlap 27184 27188 27192, overlap 27189 27192 AATAAAATAAATACA TTAATTTTTTTGTAAA TTT TTTACAAAAAAATTGC TTTAACGCCTAAAAA TERM 74 27189 - 27221 + H 87 -11.7 -2.73124 | opp_overlap 27188 27184 27192, overlap 27188 27192 ATAAAATAAATACAT TAATTTTTTTGTAAA TTT TTTACAAAAAAATTG CTTTAACGCCTAAAA TERM 75 27192 - 27218 + H 89 -11.2 -3.51708 | opp_overlap 27188 27184 27192, overlap 27189 27188 AAATAAATACATTAA TTTTTTTGTAAA TTT TTTACAAAAAAA TTGCTTTAACGCCTA TERM 76 27218 - 27192 - H 87 -11.2 -3.46955 | opp_overlap 27192 27189 27188, overlap 27188 27184 AAATAAATACATTAA TTTTTTTGTAAA TTT TTTACAAAAAAA TTGCTTTAACGCCTA TERM 77 28333 - 28309 - g 74 -5.1 -5.0917 | overlap 28310 TGATGAAAAAAGAAA CTTTGATCCTT TAA AAGTATCAAAA GAAGTTTTAGAATTA MS53_0025 27311 - 28372 + | hypothetical protein TERM 78 28700 - 28717 + G 70 -4.9 -4.79826 | GAGCTGGGACTTTAA TTGGTTT AGCT AGACCAA TTTTTAGTGCTATCT TERM 79 28936 - 28954 + G 73 -8.2 -3.46116 | overlap 28939 GGGCATGTAATGTTT CAACAATC TGC GGTTGTTG TTCCTATTGTGTATT ulaA 28390 - 30123 + | ascorbate-specific PTS system enzyme IIC MS53_0027 30182 - 30433 + | putative PTS system, IIB component sgaA 30445 - 30912 + | pentitol phosphotransferase enzyme II, A component ulaD 30922 - 31575 + | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 80 31659 - 31632 - g 79 -5.1 -5.55769 | gap 1, opp_overlap 31632 CGCTAGAAGAAAAAA TCAAAA-TAGCT AAAAA AGCTAATTTTGA TTTTATGGAATTTTC TERM 81 31808 - 31827 + G 78 -9.4 -3.02461 | opp_overlap 31805 31822 CTTAGAAAATATCCA TTTGGATC ACAT GATCCAAA TATTAGAAAAACTTC TERM 82 32165 - 32144 - g 73 -4.5 -5.12617 | opp_overlap 32144, overlap 32149 CAATGATGCAAAAAA GAAAATCTT GAAA AAGAATTTC TTTTAGCTAAAAATA TERM 83 32160 - 32149 - g 73 -3 -5.43553 | opp_overlap 32144, overlap 32144 ATGCAAAAAAGAAAA TCTT GAAA AAGA ATTTCTTTTAGCTAA TERM 84 32381 - 32370 - g 73 -4.4 -5.05782 | AGGCAGTTGAAAAAA TAGC TAAA GCTA GAGATTTTTATTATC sgaU 31553 - 32428 + | L-xylulose 5-phosphate 3-epimerase TERM 85 32800 - 32786 - g 76 -7.2 -4.41616 | AGGCTGGCAAAGAAA TTCCAT GTT ATGGAA CAACTCATGCTGATA araD 32428 - 33162 + | L-ribulose-5-phosphate 4-epimerase TERM 86 33851 - 33822 - g 77 -9.6 -2.8806 | opp_overlap 33813 33811, overlap 33811 AAACTCTTTTAGATA TTTCTAAAGATA TTAATT TATCTTTAGAAA ACGCTCTAGCAATAG MS53_0032 33164 - 34516 + | hypothetical protein TERM 87 34584 - 34613 + T 76 -3.7 -5.45652 | opp_overlap 34597 34602 TACCAAGTTACCACT CTCAAAAAAATAT TAAA ATTTTTTTATGAG TTTTTTATTAAAAAT TERM 88 34639 - 34602 - T 73 -5.9 -4.66395 | opp_overlap 34584 34615, overlap 34597 AAAAAAATATTAAAA TTTTTTTATGAGTTTTT TATT AAAAATTCCTAAAAAAA GAAAGAAAAATGTCC TERM 89 34659 - 34640 - T 73 -3.6 -5.4477 | AAATTCCTAAAAAAA GAAAGAAA AATG TCCCTTTC GAAGCATTTACAAAT TERM 90 35805 - 35773 - T 88 -5.2 -5.57396 | gap 2, opp_overlap 35776 35777 35778, overlap 35778 ATAACTAATAAAAAA TAAAA--GCCGATTTT TTA AAAATCGGCAATTTTA TTAAATTGTAAGTGG TERM 91 35776 - 35800 + T 77 -5.7 -4.73635 | opp_overlap 35773 35778, overlap 35777 35778 ACTAATAAAAAATAA AAGCCGATTTT TTA AAAATCGGCAA TTTTATTAAATTGTA TERM 92 35777 - 35799 + T 77 -9.2 -3.43097 | opp_overlap 35773 35778, overlap 35776 35778 CTAATAAAAAATAAA AGCCGATTTT TTA AAAATCGGCA ATTTTATTAAATTGT TERM 93 35778 - 35798 + T 95 -12.7 -2.64773 | opp_overlap 35773 35778, overlap 35777 35776 TAATAAAAAATAAAA GCCGATTTT TTA AAAATCGGC AATTTTATTAAATTG TERM 94 35798 - 35778 - T 100 -12.7 -5.55001 | opp_overlap 35778 35777 35776, overlap 35773 TAATAAAAAATAAAA GCCGATTTT TTA AAAATCGGC AATTTTATTAAATTG TERM 95 35845 - 35869 + T 80 -4.5 -5.59564 | opp_overlap 35838 CTTTACAATATGGGA CATAAAATA ATTTTCA TATTTTATG TTTTTTTAAATTTAT MS53_0034 36678 - 35887 - | putative ABC transporter ATP binding protein TERM 96 36195 - 36212 + g 70 -5.7 -4.28254 | opp_overlap 36194 CTGAAGTAAATTCAT CTAAAAT CAGT ATTTTAG TTTTAACTATTAAAC MS53_0035 37764 - 36688 - | hypothetical protein TERM 97 37502 - 37475 - G 75 -3.6 -5.52347 | AATAAAACGAAAAAA TTAAAATCTTCA TATC TGAAAAATTTAA ATGATAAATTTATTC TERM 98 37537 - 37527 - G 71 -4 -5.10933 | opp_overlap 37522 37521, overlap 37522 37531 TTATTCAAAAGAAAA TTCA TTT TGAA TCAAAAGAGTTTTCG TERM 99 37689 - 37711 + g 82 -2.8 -6.04378 | TTTTTTTAAAAAATA TTCTATAAAA CAT TTTTGTTGAA TTTTTTTTATAATTT TERM 100 37781 - 37749 - G 82 -8 -4.62069 | opp_overlap 37752 37757, overlap 37752 37757 37768 37769 TTTTTATTTTAAAAA TAACAAAATATCAA ATAAA TTGATATTTTGTTT AAATATTTAACCAAA TERM 101 37778 - 37752 - G 88 -9.7 -4.42748 | opp_overlap 37752 37757, overlap 37749 37757 37768 37769 TTATTTTAAAAATAA CAAAATATCAA ATAAA TTGATATTTTG TTTAAATATTTAACC TERM 102 37752 - 37778 + g 86 -9.7 -3.81137 | opp_overlap 37752 37749 37757 37768 37769, overlap 37757 TTATTTTAAAAATAA CAAAATATCAA ATAAA TTGATATTTTG TTTAAATATTTAACC TERM 103 37773 - 37757 - G 71 -3.8 -5.16681 | opp_overlap 37757 37752, overlap 37752 37749 37768 37769 TTAAAAATAACAAAA TATCAA ATAAA TTGATA TTTTGTTTAAATATT MS53_0036 39134 - 38025 - | hypothetical protein TERM 104 39354 - 39331 - H 77 -2.4 -5.88061 | overlap 39332 AAAAAAGCAAAAAAA CCCACTGATG AAAA CACCAATAGA GATAATTTTTTGAGC MS53_0037 39551 - 40573 + | hypothetical protein TERM 105 40589 - 40617 + T 72 -4.1 -4.94992 | gap 1, opp_overlap 40589, overlap 40604 AAAATAAGAAAAAAA TGCAAT-TTTAG TTTTGT CTAAAGATTGCA TTTTTATGACTTTAA TERM 106 40617 - 40589 - T 89 -4.1 -6.04419 | gap 1, opp_overlap 40589 40604 AAAATAAGAAAAAAA TGCAAT-TTTAG TTTTGT CTAAAGATTGCA TTTTTATGACTTTAA MS53_0039 41114 - 40875 - | hypothetical protein TERM 107 41256 - 41267 + r 72 -4.4 -5.05301 | TGATGTATTTACCTT CAAC ATCA GTTG TTTTTGTAATTGTTT sipS 41797 - 41408 - | signal peptidase I TERM 108 41561 - 41617 + g 75 -7 -4.18908 | opp_overlap 41562 41587, overlap 41562 41587 ACCCATAAATAAACT AGTGATAAGATTATTATTTATAAAAA GATTA TTATTTTTAATAATAATCTTATCACC TTCTTTTCCGACTAT TERM 109 41562 - 41616 + g 84 -10.5 -3.10622 | opp_overlap 41562 41587, overlap 41561 41587 CCCATAAATAAACTA GTGATAAGATTATTATTTATAAAAA GATTA TTATTTTTAATAATAATCTTATCAC CTTCTTTTCCGACTA TERM 110 41616 - 41562 - G 86 -10.5 -3.22499 | opp_overlap 41562 41561 41587, overlap 41587 CCCATAAATAAACTA GTGATAAGATTATTATTTATAAAAA GATTA TTATTTTTAATAATAATCTTATCAC CTTCTTTTCCGACTA TERM 111 41609 - 41587 - G 100 -9.4 -4.88736 | opp_overlap 41587 41562 41561, overlap 41562 TATTATTTATAAAAA GATTATTATT TTT AATAATAATC TTATCACCTTCTTTT TERM 112 41587 - 41609 + g 82 -9.4 -3.41422 | opp_overlap 41562 41587, overlap 41562 41561 TATTATTTATAAAAA GATTATTATT TTT AATAATAATC TTATCACCTTCTTTT TERM 113 41836 - 41824 - R 70 -3.5 -5.098 | opp_overlap 41824 41824, overlap 41820 41809 TAAAAATAAAACAAA TAAAA GTA TTTTA TTTTTATTTCTCTTT TERM 114 41824 - 41836 + r 76 -3.5 -5.48623 | opp_overlap 41824 41820 41809, overlap 41824 TAAAAATAAAACAAA TAAAA GTA TTTTA TTTTTATTTCTCTTT MS53_0041 44026 - 41840 - | putative ABC transporter ATP-binding protein TERM 115 43310 - 43288 - G 74 -6.5 -4.45077 | GAAAAATCATTAAAA TAAAAGAAA TAATC TTTCTTTTA ATTCCGGCTCAAGAA MS53_0042 44665 - 44141 - | hypothetical protein MS53_0043 46338 - 44677 - | hypothetical protein TERM 116 45411 - 45430 + g 70 -3 -5.31877 | opp_overlap 45403, overlap 45396 45403 45400 45399 TATTTAATATATTGT TGAATATA TTAC TATATTTA TTTTTTATAATAACT MS53_0044 46903 - 46340 - | hypothetical protein MS53_0045 47429 - 46938 - | hypothetical protein MS53_0046 47880 - 47473 - | hypothetical protein TERM 117 48002 - 47980 - R 88 -5.7 -5.40072 | opp_overlap 47975 47980 TTTGTGTGAAAAAAA TCAAAAACA GAATT CGTTTTTGA TTTTGCTATTATTTT TERM 118 48241 - 48269 + r 79 -6.1 -5.03145 | opp_overlap 48241, overlap 48245 TTTTAAGGCAAAAAA CGAATACAACTAT ACC GTAGATGTATTTG TTTTTTAAAAGATTG TERM 119 48336 - 48348 + r 80 -4.8 -5.28826 | opp_overlap 48336 TGTTATTTAAGATTA GCAC TTTAT GTGC TTTTTTATCAAATTT TERM 120 48375 - 48391 + r 70 -6.5 -4.02856 | opp_overlap 48376, overlap 48376 ATTTTTGAAGAAAAA ATCACCC ATA GGGTGAC TTTATAAATTATTAT TERM 121 48390 - 48376 - R 100 -10 -5.4505 | opp_overlap 48376 48375 TTTTTGAAGAAAAAA TCACCC ATA GGGTGA CTTTATAAATTATTA TERM 122 48376 - 48390 + r 79 -10 -3.00629 | opp_overlap 48376, overlap 48375 TTTTTGAAGAAAAAA TCACCC ATA GGGTGA CTTTATAAATTATTA fusA 50493 - 48403 - | elongation factor G TERM 123 49140 - 49128 - G 70 -7.7 -3.50302 | CAACAATAATATCAA GGTGA AGC TCACC CATACCTGAAATAAT TERM 124 49896 - 49914 + g 76 -8.2 -3.8062 | opp_overlap 49900, overlap 49900 CTAGTAAATCAGTAG GAATTTCC ATT GGGAATTC TTCTTCTGCAGATTC TERM 125 50132 - 50154 + g 79 -9.2 -3.45737 | overlap 50119 50117 TAGTTTGTAGCTTGT CTTCAAACTG TTT CGGTTTGAGG TTCTACTCCTGATTG rpsG 50970 - 50500 - | 30S ribosomal protein S7 rpsL 51417 - 51004 - | 30S ribosomal protein S12 MS53_0050 52225 - 51527 - | hypothetical protein MS53_0051 53135 - 52218 - | DNA polymerase III subunit delta' TERM 126 53073 - 53096 + g 78 -4.6 -5.45802 | opp_overlap 53073 53075 53077, overlap 53077 ATTAAGTAAAAAAAA GTGATGCAAA GTAT TTTGCATGGC TTTTTCTTTTAAAGA TERM 127 53096 - 53073 - G 82 -2.4 -5.96521 | opp_overlap 53073 53077, overlap 53075 53077 ATTAAGTAAAAAAAA GTGATGCAAA GTAT TTTGCATGGC TTTTTCTTTTAAAGA tmk 53783 - 53139 - | thymidylate kinase recR 54375 - 53791 - | recombination protein RecR TERM 128 54090 - 54100 + g 73 -5.4 -4.80656 | opp_overlap 54090 CTTTAAATAAAGAAA GCTT TTC AAGC TTTTCTATTATTAGT TERM 129 54100 - 54090 - G 73 -5.4 -4.78326 | opp_overlap 54090 CTTTAAATAAAGAAA GCTT TTC AAGC TTTTCTATTATTAGT TERM 130 54263 - 54293 + g 89 -7.7 -5.10029 | AGCTCGTAGATTTCA TCGTCTTTTGAAT ATAAA ATTCAAGCGACGA TTTTTTCAGCTTGCT MS53_0054 54638 - 54375 - | hypothetical protein dnaX 56501 - 54672 - | DNA polymerase III subunits gamma and tau TERM 131 55546 - 55563 + g 72 -4.9 -4.89063 | gap 1, opp_overlap 55546 AAAGATGAAGAAACT CGATAAGC AAA GCT-ATCG TTTATTTTTAAATCA TERM 132 56568 - 56546 - R 73 -5.7 -4.60924 | TAAATTTTTGAAAAA TAAAAAAGC ATTAA GCTTTTCTA AATAATTTTTTCATA MS53_0056 57680 - 56556 - | hypothetical protein TERM 133 57740 - 57759 + H 79 -6.4 -4.89966 | TTTCTAACTTTTTCT TTACGAGC TTCA GCACGTAA TTTGTTTTTAAGTCT TERM 134 58157 - 58183 + G 84 -9.5 -3.52113 | overlap 58160 AGGAGATGTTATCGG GAAGTATCACC CTCAT GGAGATACTTC TGTTTATAACGCGAT TERM 135 58869 - 58832 - g 84 -10.3 -3.07534 | gap 1, opp_overlap 58834, overlap 58837 TAGATCAGATAGAGA TGGAATTAATATTCTAAT TAC ACTAGA-TATTAATTCCA ATGAAGAGAGCATTT TERM 136 59577 - 59591 + G 75 -7.2 -4.18351 | opp_overlap 59577 GTTTTCTTTAGCAAA GTTAAC ACT GTTAAC TTTCTGCTTTGCTTT TERM 137 59591 - 59577 - g 71 -7.2 -3.72576 | opp_overlap 59577 GTTTTCTTTAGCAAA GTTAAC ACT GTTAAC TTTCTGCTTTGCTTT parC 57927 - 60509 + | DNA topoisomerase IV subunit A TERM 138 61737 - 61726 - g 78 -5.8 -4.85545 | ATGAAATTAATAAAA CTGC AGGA GCAG TTACAACGCTATACG TERM 139 62010 - 61989 - g 100 -11.7 -4.6971 | opp_overlap 61978 61978, overlap 61974 GAAATTCTAAGAAAA CTTCGTATG GGAA CATACGAAG TAGTCATCGGAATTA uvrB 60516 - 62522 + | excinuclease ABC subunit B MS53_0059 62537 - 62887 + | hypothetical protein lplA 62897 - 63877 + | lipoate-protein ligase A TERM 140 63940 - 63966 + G 77 -6.1 -4.7329 | gap 1, opp_overlap 63946 63947 GAAGAAAAAAGCCAG CAAAATCCAAGT GAGA ACTTG-ATTTTG TTTTTACATGGTTTT TERM 141 64371 - 64334 - g 100 -6.5 -5.82172 | overlap 64360 ATGAAGACAAAAAAA TAAGTTACTTTGATCTT TTTT ATAATCCAAGTAACTTA GCTATTGTTAATTCA MS53_0061 63880 - 64695 + | hypothetical protein MS53_0062 65028 - 64801 - | putative acyl carrier protein MS53_0063 65433 - 65050 - | hypothetical protein MS53_0064 66529 - 65447 - | hypothetical protein MS53_0065 66977 - 66570 - | hypothetical protein TERM 142 66663 - 66649 - G 76 -7.2 -4.40561 | CTTTTTGAAAAATAA TCTTTG TAT CAAAGA GAATTGTTTCTTGTA TERM 143 66905 - 66893 - G 71 -2.7 -5.45726 | overlap 66894 CATATGTTAAAAAAA CTTGT TTT ACAAA TGCATTACATTCAGT rpmB 67218 - 67409 + | 50S ribosomal protein L28 TERM 144 67442 - 67427 - T 75 -3.3 -5.56263 | opp_overlap 67421 67427, overlap 67421 ATTACAAAACAAAAA CTGAA TAAATT TTCAG TTTTTTGTTTACAAA TERM 145 67427 - 67442 + T 78 -3.3 -5.63517 | opp_overlap 67427 67421, overlap 67421 ATTACAAAACAAAAA CTGAA TAAATT TTCAG TTTTTTGTTTACAAA MS53_0067 68134 - 67451 - | hypothetical protein TERM 146 68169 - 68157 - H 86 -6.3 -5.25699 | opp_overlap 68157 68156, overlap 68166 ACTATATAATAAAAA GCAAA AAT TTTGC ATATTTTTCATATGC MS53_0068 68221 - 68436 + | hypothetical protein TERM 147 68552 - 68582 + T 100 -8.5 -5.75538 | opp_overlap 68559, overlap 68559 TCGTTCGCCCCATAT GAAAAAAGATAGC GCGTA GCTATCTTTTTTG TTTTTATTTTTTAAC TERM 148 68575 - 68559 - T 86 -6.6 -5.21709 | opp_overlap 68552 68559 CCCCATATGAAAAAA GATAGC GCGTA GCTATC TTTTTTGTTTTTATT TERM 149 68559 - 68575 + T 100 -6.6 -6.01725 | opp_overlap 68559, overlap 68552 CCCCATATGAAAAAA GATAGC GCGTA GCTATC TTTTTTGTTTTTATT MS53_0069 70704 - 68593 - | hypothetical protein TERM 150 69663 - 69677 + g 80 -10 -2.8507 | TTCCATCAGTTGAAG GCAGAG TTA CTCTGC TAGTTACTTCGCTGG TERM 151 70112 - 70140 + g 70 -5.3 -4.54727 | TCTTTTTGCGCTTTA GTGAATTCTGCTG TTC CATCAGTATTTAC TTTTAATTTAGAGAA TERM 152 70320 - 70302 - G 71 -8.8 -2.8991 | opp_overlap 70302 70302, overlap 70301 AGTCAACAATAGAAC CCGCTGAT GAT AGCAGCGG TGGATTTTCAGACTG TERM 153 70302 - 70320 + g 70 -8.8 -2.75081 | opp_overlap 70301 70302, overlap 70302 AGTCAACAATAGAAC CCGCTGAT GAT AGCAGCGG TGGATTTTCAGACTG TERM 154 70367 - 70377 + g 70 -3.2 -5.2166 | GGAGCTACAACTTTA GGAG GTT CTTC TTTTTTGACTTCTTC TERM 155 70721 - 70739 + r 79 -9 -3.48115 | opp_overlap 70721, overlap 70719 70717 TATTAAATAAAAAAA TGCAATTT TTT AAATTGCA TCTATTTTATGAAGA TERM 156 70739 - 70721 - R 100 -9 -5.99154 | opp_overlap 70721 70719 70717 TATTAAATAAAAAAA TGCAATTT TTT AAATTGCA TCTATTTTATGAAGA MS53_0070 72842 - 70746 - | hypothetical protein TERM 157 70782 - 70794 + g 72 -6.3 -4.27965 | AGCTTCGTTTTTATT TGGAT CGT ATCCA TTTGGTTTTACTTGT TERM 158 71408 - 71418 + g 71 -4 -5.02074 | opp_overlap 71408 GATAATCATATTCAA TGTT TTC AACA TTTTTTAGAACATAA rpsT 73199 - 72933 - | 30S ribosomal protein S20 TERM 159 73279 - 73259 - H 90 -4.8 -5.82036 | opp_overlap 73259 ACAACAAATAAAAAA TAAATCCC ATAAA GAGATTTA TTGCATCTATAAGCC TERM 160 73384 - 73349 - H 72 -6.3 -4.23218 | AACTATTAAAAAATA GTTTTCGAGTTTAAT TCAGTT ATTAAACTCGAATTC CCCTACCAAAATTTG MS53_0072 73627 - 74121 + | hypothetical protein TERM 161 74389 - 74399 + G 71 -4 -5.17353 | ATAATTATTTAATTG CAAA AGA TTTG TTTTTTAATAAATAT TERM 162 75023 - 75037 + G 80 -5.8 -5.03747 | overlap 75018 AGTTGTAATTTTTAT TCATTT AAT AAATGA TTTTTTAAAAAGTTT MS53_0073 74145 - 75392 + | hypothetical protein TERM 163 75737 - 75727 - g 74 -4 -5.27477 | opp_overlap 75719, overlap 75731 ACTGCAATCAAAAAA CAAA GTT TTTG AATTTAAAAAACTTA MS53_0074 75404 - 76336 + | hypothetical protein TERM 164 77040 - 77030 - g 74 -4 -5.2197 | overlap 77017 TATAAAAATTAAAAA CTTT TAT AAAG TATCAGCTTTTGATC TERM 165 77386 - 77406 + G 74 -6.9 -4.28371 | opp_overlap 77387, overlap 77387 AATTAAAAAACAAAA ACGCTTTAA AAA TTAAAGCGC TTTATGTTAATATTT TERM 166 77405 - 77387 - g 100 -10.4 -5.77571 | opp_overlap 77386 77387 ATTAAAAAACAAAAA CGCTTTAA AAA TTAAAGCG CTTTATGTTAATATT TERM 167 77387 - 77405 + G 86 -10.4 -3.15396 | opp_overlap 77387, overlap 77386 ATTAAAAAACAAAAA CGCTTTAA AAA TTAAAGCG CTTTATGTTAATATT MS53_0075 76359 - 77603 + | hypothetical protein rplM 77706 - 78140 + | 50S ribosomal protein L13 TERM 168 78516 - 78488 - g 72 -3.7 -5.23016 | AAAGAACGTAAAAAA CCTGGACTTCGTG CTG CACGTCGTGCAAG ACAATTCTCAAAACG rpsI 78140 - 78535 + | 30S ribosomal protein S9 TERM 169 78543 - 78560 + F 90 -9.9 -4.03413 | AACGTTAATTTATTT TGCATGC AATT GCATGCA TTTATATGCGAGCGT TERM 170 78965 - 78951 - g 70 -5.8 -4.29396 | opp_overlap 78951 AACCATCCAGGAAAA CTTTTT TCT AAAAAG TTTAAGTTATTTGAT TERM 171 79638 - 79626 - g 72 -4.9 -4.82855 | opp_overlap 79619 79611, overlap 79613 79619 TATGAAAGTCAAAAA TTTGA TTT TCAAA TTTTAGAAACAAGCT aldA 78714 - 80060 + | aldehyde dehydrogenase TERM 172 80105 - 80125 + F 100 -10.5 -5.35222 | opp_overlap 80104 GAAAATAAAAAACCT GAGTTTCCA AGT TGGAAGCTC TTTTTTATACCTTTT TERM 173 80147 - 80173 + F 76 -8.2 -3.82448 | overlap 80147 80148 80150 ATACCTTTTACCTTA TTACTTATATAC GTA GTATATAAGTAC ATTTTTTAATTATTT TERM 174 80147 - 80174 + F 93 -6.6 -5.43514 | gap 1, overlap 80147 80148 80150 ATACCTTTTACCTTA T-TACTTATATAC GTA GTATATAAGTACA TTTTTTAATTATTTT TERM 175 80148 - 80172 + F 87 -11.7 -2.87029 | overlap 80147 80147 80150 TACCTTTTACCTTAT TACTTATATAC GTA GTATATAAGTA CATTTTTTAATTATT TERM 176 80150 - 80170 + F 79 -9.9 -2.95904 | overlap 80148 80147 80147 CCTTTTACCTTATTA CTTATATAC GTA GTATATAAG TACATTTTTTAATTA TERM 177 81171 - 81154 - g 71 -7.1 -3.85092 | overlap 81141 81140 AGCATTTATAGTAAA TGAACAA GGCT TTGTTCA AGAAAATGAGTATTT TERM 178 81196 - 81212 + G 74 -8.1 -3.59979 | opp_overlap 81195 81198 GTATTTTACTAAATC TAGATTC GTC GAATCTA TTTGAGCTAAAAACA MS53_0079 80201 - 81889 + | putative transposase TERM 179 81935 - 81907 - f 93 -7.5 -5.15117 | opp_overlap 81907 TAAAAGCGCAAAAAA CGAATACGCCT TATTTAT AGGTGTATTCG TTTTTTTCTTCATTA TERM 180 81907 - 81935 + F 100 -9.7 -5.87996 | opp_overlap 81907 TAAAAGCGCAAAAAA CGAATACGCCT TATTTAT AGGTGTATTCG TTTTTTTCTTCATTA TERM 181 82259 - 82245 - f 82 -4.4 -5.79588 | opp_overlap 82247, overlap 82247 TTAAAACTAAAAAAA TATATT TTT AATATA ATTAAAAATACGATT TERM 182 82269 - 82247 - f 83 -8 -4.51121 | opp_overlap 82247, overlap 82245 AAAACTAAAAAAATA TATTTTTAAT ATA ATTAAAAATA CGATTCAAAATAAGG TERM 183 83639 - 83629 - g 71 -4 -5.1101 | opp_overlap 83629 TCAGTATTTAAAAAA GTTA ATG TAAC TTCTGGAGGAGAAAA MS53_0080 82300 - 83916 + | putative ABC transporter ATP-binding protein MS53_0081 83916 - 84593 + | hypothetical protein TERM 184 84614 - 84598 - T 91 -5.9 -5.67283 | opp_overlap 84598 84592, overlap 84591 AAGTGAAATAAAAAA TGCAATT TGA AACTGCA TTTTTATACATTGTA TERM 185 84645 - 84666 + T 73 -2.3 -5.7946 | overlap 84646 ATTTTCAAGTCATTG CTCTCAAAA AATT TTTTGGGAA TTTTTTTATTAAAAA TERM 186 84807 - 84790 - T 100 -6.3 -5.75538 | TTTAAAAAATAAAAA GCCGATT TTAA AATCGAC AATTTCATTAAATTG TERM 187 84855 - 84866 + T 80 -4.4 -5.52023 | opp_overlap 84855 CTTACAATATGGAAA TGCA ATGT TGCA TTTTTTATTAATCGT rbfA 85209 - 84874 - | ribosome-binding factor A deoB 86396 - 85209 - | phosphopentomutase MS53_0084 86419 - 87924 + | hypothetical protein TERM 188 87921 - 87949 + T 70 -8.4 -2.74965 | gap 1, opp_overlap 87921 87929, overlap 87920 87929 GTATAAAAAAAGTAA GTAAAAAAGCTGA AAAA TCAGCT-TTTTAC CATTTTTAATTATTT TERM 189 87949 - 87921 - T 83 -8.4 -4.08806 | gap 1, opp_overlap 87921 87920 87929, overlap 87929 GTATAAAAAAAGTAA GTAAAAAAGCTGA AAAA TCAGCT-TTTTAC CATTTTTAATTATTT TERM 190 87929 - 87942 + T 82 -6.7 -4.7657 | opp_overlap 87921 87929, overlap 87921 87920 AAAGTAAGTAAAAAA GCTGA AAAA TCAGC TTTTTACCATTTTTA TERM 191 87942 - 87929 - T 95 -6.7 -5.33921 | opp_overlap 87929 87921 87920, overlap 87921 AAAGTAAGTAAAAAA GCTGA AAAA TCAGC TTTTTACCATTTTTA TERM 192 88116 - 88102 - T 72 -4.4 -5.06116 | overlap 88105 AAAATAACAACAAAA TAATTT AAT AAATTA AAAAAAGAATAGAGA TERM 193 88190 - 88173 - T 71 -8.5 -2.99458 | overlap 88170 88175 TATTACAAAACATTA TAGGCAT ATAA ATGCCTA CGCTAATTATATTAC MS53_0085 89867 - 88197 - | putative transport system permease protein p69 TERM 194 88369 - 88357 - G 74 -4.9 -5.08824 | TCGTTAGCTAAAAAA CTATA TGT TATAG AAGACCTGAAAAATA TERM 195 88963 - 88978 + g 72 -4.8 -4.88129 | opp_overlap 88947 88953 88963, overlap 88947 88953 AAAAGTTTAATTACA CTTTTA TAAT TAAAAG TTTTTGCTAATTTTT MS53_0086 90610 - 89864 - | putative ABC transporter atp-binding protein TERM 196 90343 - 90366 + g 74 -2.5 -5.58209 | opp_overlap 90345, overlap 90345 90354 90356 CACTTTCAATTAAAT TAGGTTTTT GTGTTA AAAAACCAA TTTTTTTAACTTTGG TERM 197 90354 - 90376 + g 72 -6.5 -4.37737 | opp_overlap 90345, overlap 90345 90343 90356 AAATTAGGTTTTTGT GTTAAAAAA CCAAT TTTTTTAAC TTTGGTTTTTCATTG TERM 198 90512 - 90526 + g 72 -5.7 -4.61231 | opp_overlap 90512, overlap 90521 AGAAGGTCCAATAAA GGCAA TCATT TTGCC TTTTTGCAAATCTAG TERM 199 90592 - 90611 + g 77 -2.2 -5.85011 | GATATTTAATTGTTA CATTATCA AAAC TAATAATG TTTTTTTGGTTTTTA MS53_0087 91838 - 90624 - | putative P37-like ABC transporter substrate-binding lipoprotein TERM 200 91125 - 91098 - G 71 -7.3 -3.73725 | opp_overlap 91098, overlap 91091 AATAACAATTCCAAA TGATAAAAATT TTTCTC AATTTTTATCA TTTCAAGCTTTTATA TERM 201 91848 - 91832 - G 83 -5.1 -5.67529 | AATTAAAAATAAAAA CCTCC ATAAACA GGAGG AAAAAACACAAACAA TERM 202 92153 - 92129 - g 70 -5.8 -4.33956 | opp_overlap 92132, overlap 92132 GTTAAAACATATAAA GAAGTTCATC CTAAT GATGAACTTG AATTTGTGGATTTGA TERM 203 92150 - 92132 - g 77 -7.5 -4.2572 | opp_overlap 92132, overlap 92129 AAAACATATAAAGAA GTTCATC CTAAT GATGAAC TTGAATTTGTGGATT TERM 204 92132 - 92150 + G 70 -7.5 -3.34113 | opp_overlap 92132 92129 AAAACATATAAAGAA GTTCATC CTAAT GATGAAC TTGAATTTGTGGATT acpD 92036 - 92635 + | acyl carrier protein phosphodiesterase TERM 205 92685 - 92644 - T 88 -12 -2.54434 | opp_overlap 92645 92656, overlap 92642 92649 92656 ATTCTAATTAAAATT GCAAATAAAAAAGTAAGA GAAAAT TCTTACTTTTTTATTTGT CTCTAACTAAAATTT TERM 206 92645 - 92684 + T 100 -16.2 -2.9176 | opp_overlap 92644 92642 92649 92656, overlap 92656 TTCTAATTAAAATTG CAAATAAAAAAGTAAGAG AAAA TTCTTACTTTTTTATTTG TCTCTAACTAAAATT TERM 207 92680 - 92649 - T 89 -10.5 -3.78087 | opp_overlap 92645 92656, overlap 92644 92642 92656 AATTAAAATTGCAAA TAAAAAAGTAAGA GAAAAT TCTTACTTTTTTA TTTGTCTCTAACTAA TERM 208 92656 - 92673 + T 86 -4.9 -5.76237 | opp_overlap 92649 92644 92642 92656, overlap 92645 ATTGCAAATAAAAAA GTAAGAG AAAA TTCTTAC TTTTTTATTTGTCTC TERM 209 92673 - 92656 - T 82 -4.2 -5.64421 | opp_overlap 92656 92645, overlap 92649 92644 92642 ATTGCAAATAAAAAA GTAAGA GAAAAT TCTTAC TTTTTTATTTGTCTC MS53_0089 93151 - 92678 - | hypothetical protein MS53_0090 94254 - 93145 - | hypothetical protein TERM 210 94003 - 94026 + g 100 -6.2 -5.95286 | gap 1 CTCTTTAGTGTTGAA GTTATCAA-AG ATT CTATTGATAAC TTTTTTGTTTTTAAT gatB 95668 - 94247 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 211 95013 - 95027 + g 71 -4.4 -4.99134 | opp_overlap 95019 GCAAGTTTGATATTT TTTAAA GAA TTTAAA TTTTTAATTTCAACT gatA 96980 - 95661 - | amidase TERM 212 95856 - 95833 - G 70 -6.8 -3.97622 | opp_overlap 95833, overlap 95828 GTAGTTAAAATATAA TCCATAAAGT CATA ACTTTTTGGA TTTTTAATATCACTA TERM 213 95833 - 95856 + g 79 -6.8 -4.81551 | opp_overlap 95833 95828 GTAGTTAAAATATAA TCCATAAAGT CATA ACTTTTTGGA TTTTTAATATCACTA TERM 214 96000 - 95977 - G 75 -5.4 -4.85782 | GCTTTTAAAAATAAA TCTTTTTGGT TATC ATCAAAAAGA AAATAACTTCCTAAA TERM 215 96257 - 96273 + g 70 -6.6 -3.91908 | opp_overlap 96256, overlap 96254 CGTCAAGTAACTTAG TGTAGC TATCT GCTACA TATTTTTCGCAGTAT gatC 97282 - 96980 - | Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit rluC 98134 - 97289 - | ribosomal large subunit pseudouridine synthase C TERM 216 98004 - 98020 + g 74 -2.3 -5.60993 | TCGGTTATTCTTTTT GAATTAA CTT TTATTTC TTTTTTTCTAAAAAG TERM 217 98097 - 98108 + g 71 -4.4 -4.95957 | opp_overlap 98097, overlap 98092 AATTTAAAAAGAGAA CGAT TTTC ATCG TTTTTACTTGCTTTA scpB 98703 - 98134 - | segregation and condensation protein B TERM 218 98617 - 98640 + g 93 -11.2 -3.48807 | opp_overlap 98620, overlap 98620 TTCGTGAGTGTTATT CAAGTTAAAG ACTT CTTTAACTTG TTCTAGATTTAATCC TERM 219 98620 - 98637 + g 71 -7.1 -3.86995 | opp_overlap 98620, overlap 98617 GTGAGTGTTATTCAA GTTAAAG ACTT CTTTAAC TTGTTCTAGATTTAA scpA 99436 - 98693 - | segregation and condensation protein A TERM 220 99239 - 99278 + g 71 -4 -5.05577 | gap 1, opp_overlap 99246, overlap 99242 99243 99246 ATAAATAAAGATAGT TGCATAATTTAGATATT CAGCAGC AATATCTAAATTA-GTA TTTTTGATTTCATTT TERM 221 99243 - 99275 + g 70 -8.1 -3.05798 | opp_overlap 99246, overlap 99242 99239 99246 ATAAAGATAGTTGCA TAATTTAGATATT CAGCAGC AATATCTAAATTA GTATTTTTGATTTCA plsC 100163 - 99426 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 222 99876 - 99891 + g 71 -4 -5.00884 | overlap 99874 TTTATTTTCAGCGCC TTCTTC TTGA GAAGGA TTTTTTAAAGCAGCT acpS 100474 - 100187 - | holo-acyl-carrier protein synthase TERM 223 100261 - 100235 - G 73 -9 -2.75963 | opp_overlap 100234, overlap 100218 100234 100240 ATTTTCATGTGAAAT TGAAATTTTAAA ATT TTTAAAATTCCA CTCATTATTAATTTT MS53_0099 100890 - 100492 - | hypothetical protein gltX 102280 - 100880 - | glutamyl-tRNA synthetase TERM 224 101447 - 101398 - G 100 -13.4 -2.87211 | gap 3, overlap 101401 ATTCTTTCTTAGACA TAACTTCCTTAGCGTCTTCTGAGGT TCA ACCT-AGAAG-CGCTAAG-AAGTTA AAGATAGCATGCGGT TERM 225 101444 - 101401 - G 90 -10.7 -3.58726 | gap 3, overlap 101398 CTTTCTTAGACATAA CTTCCTTAGCGTCTTCTGAGGT TCA ACCT-AGAAG-CGCTAAG-AAG TTAAAGATAGCATGC TERM 226 101514 - 101524 + g 71 -4 -5.09225 | opp_overlap 101511 TTTAGTGATAGATCT CTTT TAG AAAG TTTTTTACCTCCCAT TERM 227 102088 - 102111 + g 73 -9 -2.59927 | gap 1, opp_overlap 102092, overlap 102084 CTGGAATTATTCCAA GTCACGCTAGA TTT TCTAGC-TGAC TAGCTTCTCCGCCTT TERM 228 102333 - 102350 + H 76 -6.3 -4.57569 | opp_overlap 102332 102318 102346 CATTTTGGTTTAAAT TTGGCTA AAAA TGGCCAA TTTTTAACAAAATGG MS53_0101 102417 - 103736 + | hypothetical protein TERM 229 103935 - 103969 + T 100 -14.6 -4.68655 | opp_overlap 103945, overlap 103938 103945 AATAATACTTAATTT CAACAAAAAAGTAAGC TAA GCTTACTTTTTTGTTA TTTATTTTCGAGTTA TERM 230 103938 - 103966 + T 100 -16.3 -4.43397 | opp_overlap 103945, overlap 103935 103945 AATACTTAATTTCAA CAAAAAAGTAAGC TAA GCTTACTTTTTTG TTATTTATTTTCGAG TERM 231 103959 - 103945 - T 100 -8.6 -5.4756 | opp_overlap 103945 103938 103935 AATTTCAACAAAAAA GTAAGC TAA GCTTAC TTTTTTGTTATTTAT TERM 232 103945 - 103959 + T 100 -8.6 -5.74288 | opp_overlap 103945, overlap 103938 103935 AATTTCAACAAAAAA GTAAGC TAA GCTTAC TTTTTTGTTATTTAT MS53_0102 105697 - 103982 - | putative ABC transporter protein TERM 233 104419 - 104432 + g 100 -5.3 -5.93252 | opp_overlap 104419 CAAATACGATATCAA CATCA GGCA TGATG TTTTTTGTTTTTCAA TERM 234 105236 - 105250 + g 78 -4.4 -5.42164 | TTTTAAATTGTTAAT TTTATT TTT AATAAA TTTTTCTTCTTTATA MS53_0103 106585 - 105728 - | putative ABC transporter, permease protein MS53_0104 107439 - 106585 - | putative multiple sugar ABC transporter permease MS53_0105 108995 - 107442 - | putative ABC transporter protein, periplasmic component TERM 235 107635 - 107654 + g 70 -6.6 -4.07246 | TAGTTAAATACTGAG TCAAATAA TTCG TTATTTGA TTTAATTTCACCTAA TERM 236 108838 - 108857 + g 70 -7.8 -3.36823 | overlap 108834 AAAGTAGTTTTTAGA GCAGCTGC TTTA GCATCTGC TTCCATTTTAGCAAC TERM 237 109139 - 109106 - R 76 -6.2 -4.64144 | opp_overlap 109111, overlap 109111 AAGAATTTGCAAAAA TAAAACACTAAGCA TGCATT TACTTAGTGTTTTT TTGATAAATTTGGCT TERM 238 109111 - 109134 + r 76 -3.9 -5.54894 | opp_overlap 109106 109111 TTTGCAAAAATAAAA CACTAAGCA TGCATT TACTTAGTG TTTTTTTGATAAATT TERM 239 109134 - 109111 - R 84 -6.1 -5.26119 | opp_overlap 109111, overlap 109106 TTTGCAAAAATAAAA CACTAAGCA TGCATT TACTTAGTG TTTTTTTGATAAATT pgmB 109824 - 109153 - | beta-phosphoglucomutase MS53_0107 112183 - 109820 - | hypothetical protein TERM 240 110576 - 110552 - G 81 -10.3 -2.60571 | opp_overlap 110550 110552, overlap 110551 AATTTTGTAAGGAAT TTTACTTAAAA CTT TTTTAAGTAAA TCTTTGTTTTTACTT TERM 241 110552 - 110576 + g 91 -10.3 -4.08353 | opp_overlap 110552 110551, overlap 110550 AATTTTGTAAGGAAT TTTACTTAAAA CTT TTTTAAGTAAA TCTTTGTTTTTACTT TERM 242 111389 - 111416 + g 86 -7.2 -5.08824 | opp_overlap 111394, overlap 111394 TTCATTAGCGTTAGC TAAAACTTTTTC TTTT GAAATAGTTTTA TTTTTTGAATCAACG TERM 243 111394 - 111411 + g 71 -2.7 -5.43553 | opp_overlap 111394, overlap 111389 TAGCGTTAGCTAAAA CTTTTTC TTTT GAAATAG TTTTATTTTTTGAAT MS53_0108 113844 - 112201 - | putative oligo-alpha-glucosidase TERM 244 112286 - 112299 + g 79 -6.7 -4.69048 | opp_overlap 112285 112282 GTTGACAAAATCACG CTTCC TTGT GGAAG TTTGTTTAATTTTAT TERM 245 112421 - 112444 + g 82 -5.5 -5.4833 | ATTTCGCTAGTACCA TGAATTAAA ATACTA TTTAATTCA TTTTTTCTTAAGTAA TERM 246 113845 - 113875 + r 88 -5.6 -5.63103 | opp_overlap 113847 113850, overlap 113837 113847 AACTTTTTTATTCAT AATAACTTTTACTT TTC AAGTAAATGTTATA TTTTTTTCATTGAAA TERM 247 113873 - 113847 - R 72 -8.2 -3.35679 | opp_overlap 113837 113845 113847, overlap 113850 CTTTTTTATTCATAA TAACTTTTACTT TTC AAGTAAATGTTA TATTTTTTTCATTGA TERM 248 113847 - 113873 + r 83 -8.2 -4.45473 | opp_overlap 113847 113850, overlap 113837 113845 CTTTTTTATTCATAA TAACTTTTACTT TTC AAGTAAATGTTA TATTTTTTTCATTGA MS53_0109 114628 - 113945 - | hypothetical protein MS53_0110 115326 - 114625 - | putative DNase/RNase endonuclease TERM 249 115189 - 115201 + g 80 -5.5 -5.32396 | GCTGCTAGTTCTTGG CGAGC TTT GTTCG TTTTGTTTTTCGTCT TERM 250 115296 - 115306 + g 74 -2.6 -5.67529 | opp_overlap 115295, overlap 115295 TAGACAAAATTAACT TTTT TCA AAAA TTTTTCTTTTTCATT MS53_0111 116624 - 115323 - | putative tRNA (Uracil-5-) -methyltransferase MS53_0112 117168 - 116626 - | putative methyltransferase TERM 251 116858 - 116834 - G 72 -3.7 -5.35224 | TCTATAAAAATAAAA TCAAAAACCAT TGT ATTATTTTTGA TAAATTCCATAGCAT trmB 117778 - 117161 - | tRNA (guanine-N(7))-methyltransferase TERM 252 117358 - 117379 + g 77 -7.5 -4.25848 | opp_overlap 117372, overlap 117372 CGTTATCGGTTTTTA GATAAAAAT TAGA ATTTTTATC TTTTAATAAAAACTT TERM 253 117786 - 117815 + r 70 -8.1 -3.23899 | opp_overlap 117794, overlap 117794 AATCTCATAATTATT TAAAAAAATTAGC AACT GCTAATTTTTTTC TTGAATTGCTTCAAA TERM 254 117807 - 117794 - R 88 -5.3 -5.49729 | opp_overlap 117786 117794 AATTATTTAAAAAAA TTAGC AACT GCTAA TTTTTTTCTTGAATT TERM 255 117794 - 117807 + r 100 -5.3 -5.83226 | opp_overlap 117794, overlap 117786 AATTATTTAAAAAAA TTAGC AACT GCTAA TTTTTTTCTTGAATT pgk 118994 - 117804 - | phosphoglycerate kinase TERM 256 118281 - 118295 + g 74 -5 -5.14477 | TAGTGAGTGTCCTAT GCTTTG CCC TAAAGC TTTTTTAAATGTATA TERM 257 118576 - 118562 - G 76 -8.6 -3.5511 | overlap 118560 CGTCATTTACAAATA CATCAC AAA GTGATG CTCAGTATTTTCCAA TERM 258 119433 - 119421 - g 77 -6.3 -4.66987 | GACACTTTAACAAAA CTTGT AGA ACAAG TTAGAAGCTATAAAG MS53_0115 119274 - 119822 + | hypothetical protein MS53_0116 119827 - 120273 + | hypothetical protein MS53_0117 120270 - 121364 + | hypothetical protein TERM 259 121369 - 121412 + T 75 -8.5 -3.37879 | opp_overlap 121369 121370 121371 121382, overlap 121370 121382 ATCTTAAGTAACAAA GGTAACAAAAAAATATCGA AATTAA TCGATATTTTTTTGTTAAA TTGATTCGCATTACT TERM 260 121412 - 121369 - T 85 -8.5 -4.32951 | opp_overlap 121369 121370 121382, overlap 121370 121371 121382 ATCTTAAGTAACAAA GGTAACAAAAAAATATCGA AATTAA TCGATATTTTTTTGTTAAA TTGATTCGCATTACT TERM 261 121370 - 121411 + T 88 -12 -2.62246 | opp_overlap 121369 121370 121371 121382, overlap 121369 121382 TCTTAAGTAACAAAG GTAACAAAAAAATATCGA AATTAA TCGATATTTTTTTGTTAA ATTGATTCGCATTAC TERM 262 121411 - 121370 - T 91 -12 -3.19048 | opp_overlap 121370 121369 121382, overlap 121369 121371 121382 TCTTAAGTAACAAAG GTAACAAAAAAATATCGA AATTAA TCGATATTTTTTTGTTAA ATTGATTCGCATTAC TERM 263 121410 - 121371 - T 100 -15.5 -2.50947 | opp_overlap 121370 121369 121382, overlap 121370 121369 121382 CTTAAGTAACAAAGG TAACAAAAAAATATCGA AATTAA TCGATATTTTTTTGTTA AATTGATTCGCATTA TERM 264 121399 - 121382 - T 85 -4.2 -5.83226 | opp_overlap 121370 121369 121382, overlap 121371 121370 121369 AAGGTAACAAAAAAA TATCGA AATTAA TCGATA TTTTTTTGTTAAATT TERM 265 121382 - 121399 + T 85 -4.2 -5.83226 | opp_overlap 121382 121371 121370 121369, overlap 121370 121369 AAGGTAACAAAAAAA TATCGA AATTAA TCGATA TTTTTTTGTTAAATT MS53_0118 122262 - 121423 - | hypothetical protein rpe 122945 - 122274 - | ribulose-phosphate 3-epimerase MS53_0120 123762 - 122932 - | putative ATP/GTP-binding protein TERM 266 123656 - 123667 + g 70 -3 -5.28683 | TCGCCAACTTTAGGA GTTA TTTT TAAC TTTTTTAATCTTCCT pknB 124742 - 123762 - | serine/threonine-protein kinase TERM 267 123860 - 123846 - G 70 -2.2 -5.38321 | AAATACTAGAAAAAA TTTACT TTG AATAAA TCAAGAAAAGTTTTT TERM 268 123884 - 123862 - G 78 -9.3 -3.09784 | opp_overlap 123862 123865 123865, overlap 123861 TTACTTTGAATAAAT CAAGAAAAG TTTTT CTTTTCTTG TAAATTTTTAGGATT TERM 269 123862 - 123884 + g 77 -9.3 -2.85019 | opp_overlap 123862 123861, overlap 123865 123865 TTACTTTGAATAAAT CAAGAAAAG TTTTT CTTTTCTTG TAAATTTTTAGGATT prpC 125508 - 124762 - | protein phosphatase TERM 270 125355 - 125317 - G 70 -7.7 -3.38514 | opp_overlap 125316 125324, overlap 125315 125324 TTGAAAGGAAATATA GCTAAAATTTTTGCTAA ATTGA TTAGTAAAAATTTTTGC AGTTTCTTCGGCAGC TERM 271 125324 - 125348 + g 73 -5.2 -4.7339 | opp_overlap 125315 125324 125317, overlap 125316 GAAATATAGCTAAAA TTTTTGCTAA ATTGA TTAGTAAAAA TTTTTGCAGTTTCTT gmk 126097 - 125501 - | guanylate kinase TERM 272 126164 - 126174 + r 76 -6.8 -4.41817 | opp_overlap 126164, overlap 126159 126157 126154 ATTAAAAATAAAAAA GCCA CTT TGGC TTTTGAATTATTTTC TERM 273 126174 - 126164 - R 100 -6.8 -5.95286 | opp_overlap 126159 126157 126154 126164 ATTAAAAATAAAAAA GCCA CTT TGGC TTTTGAATTATTTTC rpmG 126334 - 126182 - | 50S ribosomal protein L33 nfo 127200 - 126367 - | endonuclease IV TERM 274 127035 - 127047 + g 89 -6.3 -5.38047 | opp_overlap 127035 127034 CTTTAGCATAAAAAT CAAGA TAT TCTTG TTTTTTATATAGCTC MS53_0126 128261 - 127188 - | putative potassium channel protein TERM 275 127243 - 127277 + g 76 -8.6 -3.59649 | overlap 127241 127252 127260 127276 TCAGTATTTTTTTCT GCTTTAGTAGCTTTAG CCT CTAAAGCTTCTTTAGC TTTAAGAGCTTGTTT TERM 276 127252 - 127268 + g 87 -9.5 -4.05026 | overlap 127243 127260 TTTTCTGCTTTAGTA GCTTTAG CCT CTAAAGC TTCTTTAGCTTTAAG MS53_0127 129236 - 128262 - | hypothetical protein TERM 277 128539 - 128509 - G 100 -12.8 -3.37056 | opp_overlap 128505 128524, overlap 128526 ACGATGTATTTATAA CTTCCTTTTTTGCA AAA TTCAAAAAAGGAAG CAACGTCTTTTTTAG TERM 278 129275 - 129286 + H 79 -5.8 -4.99435 | opp_overlap 129275, overlap 129269 TTAAAAAGCAAAAAA GAGC AAAT GCTC TTTTTAATTATTGCC TERM 279 129286 - 129275 - H 90 -5.8 -5.54079 | opp_overlap 129275 129269 TTAAAAAGCAAAAAA GAGC AAAT GCTC TTTTTAATTATTGCC TERM 280 130415 - 130394 - g 78 -7.4 -4.62302 | overlap 130412 GAACATTCTGAAAAA GTGCATTT AATTCA AAATGCAC TTAGAGCTCATAAAG TERM 281 131423 - 131409 - g 75 -7.2 -4.21319 | ATGAATTTGAAGAAA TCATTC GTA GAATGA TTAAAGTTTTTGTTA TERM 282 131845 - 131823 - g 77 -5 -5.20534 | overlap 131817 ATGAAGGAACAAAAA TGTTTGAA GATTTAA TTCAAACA ATTGCCTTTGAATCT secA 129542 - 132823 + | preprotein translocase subunit SecA TERM 283 132826 - 132857 + F 84 -8.9 -4.13282 | opp_overlap 132821, overlap 132833 132853 CAAATTAAAATAAAT TATAAAGGCAGGC CATAGT GCTTGCTTTTATA TTTTAAAAATGTAAT TERM 284 132833 - 132850 + F 71 -4.8 -4.89567 | opp_overlap 132821, overlap 132826 AAATAAATTATAAAG GCAGGC CATAGT GCTTGC TTTTATATTTTAAAA TERM 285 133233 - 133218 - g 95 -4.8 -5.9873 | TTAGTAGAAAAAAAA TGTTTA TTTC TAAACA AGCAACTTTTATTTC TERM 286 133341 - 133357 + G 91 -8.1 -5.18561 | opp_overlap 133344 TAGTGGTTTCTTTTA TAAGCTT TGC AAGCTTA TTTTTTAGCTATTTA MS53_0129 132878 - 134728 + | hypothetical protein bcrA 134728 - 135429 + | ABC transporter ATP-binding protein TERM 287 135745 - 135731 - g 74 -2.8 -5.64006 | AGTGAATTAAAAAAA CAAACC AGT GATTCG ATTAATATTTTAAAA MS53_0131 135422 - 136483 + | hypothetical protein MS53_0132 136473 - 137402 + | hypothetical protein TERM 288 137789 - 137812 + G 70 -5.4 -4.46652 | opp_overlap 137794, overlap 137791 CTAGAGCAAGAGTTG GACAATTATT TGAT AATAATTGAC TTTGATTTTTATTTA MS53_0133 137392 - 138297 + | hypothetical protein TERM 289 138826 - 138846 + G 81 -8.5 -4.14764 | opp_overlap 138822 TGACTATAATATTGA TAAAAATGA AAT TCATTTTTA TTTACTTCTTTCACA MS53_0134 138287 - 139105 + | hypothetical protein TERM 290 139127 - 139147 + F 90 -4.7 -5.87996 | opp_overlap 139127 AAAATTAATAAATAT GCCAAGATA TAA TTTTTTGGC TTTTTTTATTAATTA TERM 291 139288 - 139261 - f 100 -9.4 -5.54192 | ATTAATTTAAAAAAA TAATGAATACAT ATTA ATGCATTCATTA CCCATATTGTAAAGT TERM 292 139327 - 139357 + F 80 -4.3 -5.57396 | gap 2, opp_overlap 139332 139333 139334, overlap 139334 CCACTTACAATTTAA TAAAATTGCCGATTT TTA AAATCGGC--TTTTA TTTTTTATTAGTTAT TERM 293 139354 - 139332 - f 71 -4.8 -4.73635 | opp_overlap 139327 139334, overlap 139333 139334 TACAATTTAATAAAA TTGCCGATTT TTA AAATCGGCTT TTATTTTTTATTAGT TERM 294 139353 - 139333 - f 75 -8.3 -3.43097 | opp_overlap 139327 139334, overlap 139332 139334 ACAATTTAATAAAAT TGCCGATTT TTA AAATCGGCT TTTATTTTTTATTAG TERM 295 139334 - 139352 + F 100 -11.8 -5.55001 | opp_overlap 139333 139332 139334, overlap 139327 CAATTTAATAAAATT GCCGATTT TTA AAATCGGC TTTTATTTTTTATTA TERM 296 139352 - 139334 - f 87 -11.8 -2.64773 | opp_overlap 139334 139327, overlap 139333 139332 CAATTTAATAAAATT GCCGATTT TTA AAATCGGC TTTTATTTTTTATTA TERM 297 140487 - 140470 - f 82 -9.9 -3.322 | opp_overlap 140470 ATGGTTATATATGAA TGCTCTC TTTT GAGAGCA TTTTTCTTTCTTTTT TERM 298 140470 - 140487 + F 100 -9.9 -5.63012 | opp_overlap 140470 ATGGTTATATATGAA TGCTCTC TTTT GAGAGCA TTTTTCTTTCTTTTT TERM 299 140557 - 140526 - f 100 -7.6 -5.7946 | gap 1 TTTTTAATAAAAAAA CTCCCAAAAAAA-AT TTA ATATTTTTTTGAGAG TGGTAACTTGGAAGT TERM 300 140586 - 140641 + F 91 -6.1 -5.79588 | gap 1, opp_overlap 140591 140597 140618 GTTACAATGTGAGAT GAAAATATT-AATCTAACATTTAA ACTTTCAAA TTAAATTTTAGATTTAATATTTTC TTTTTTTACTTTTAA TERM 301 140838 - 140852 + G 74 -8.6 -3.29043 | TAATAATGACACCTA TTGCAG CTA CTGCAA TTATAGCAACAGCTT TERM 302 141627 - 141658 + G 73 -8.8 -3.05224 | gap 1, opp_overlap 141608, overlap 141627 AAACACCTACCGTTG TTCTGCCAGTTGCAG GGC CTGCAACCGGT-GAA GTTTTAAACGCATAT TERM 303 142104 - 142079 - g 70 -7.7 -3.36054 | opp_overlap 142077 142076, overlap 142077 CAAAGTTATACAACA GTAACAGATTT ACTA AAAGCTGTTAC AGATTTAATTAACCA xylF 140798 - 142141 + | ABC transporter xylose-binding lipoprotein TERM 304 142187 - 142146 - f 100 -13.5 -4.82162 | opp_overlap 142148 142153 142159, overlap 142148 142159 CACAACAATAGAAAA CACTAAATAAAAATCAATT TTTA AATTGATTTTTATTTAGTT TAAATTAAGAAAATA TERM 305 142148 - 142185 + F 100 -16.1 -3.75153 | opp_overlap 142148 142146 142159, overlap 142153 142159 CAACAATAGAAAACA CTAAATAAAAATCAATT TTTA AATTGATTTTTATTTAG TTTAAATTAAGAAAA TERM 306 142185 - 142148 - f 100 -16.1 -4.00463 | opp_overlap 142148 142153 142159, overlap 142146 142159 CAACAATAGAAAACA CTAAATAAAAATCAATT TTTA AATTGATTTTTATTTAG TTTAAATTAAGAAAA TERM 307 142153 - 142180 + F 90 -10.2 -4.10672 | opp_overlap 142148 142146 142159, overlap 142148 142159 ATAGAAAACACTAAA TAAAAATCAATT TTTA AATTGATTTTTA TTTAGTTTAAATTAA TERM 308 142174 - 142159 - f 80 -4.8 -5.37171 | opp_overlap 142153 142148 142159, overlap 142148 142146 AACACTAAATAAAAA TCAATT TTTA AATTGA TTTTTATTTAGTTTA TERM 309 142159 - 142174 + F 80 -4.8 -5.41941 | opp_overlap 142159 142148 142146, overlap 142153 142148 AACACTAAATAAAAA TCAATT TTTA AATTGA TTTTTATTTAGTTTA TERM 310 142223 - 142245 + G 70 -6.4 -4.09739 | opp_overlap 142226, overlap 142226 AAAGAATACGCAATT GAATTTGAAA ATA TTTCAAAATC TTTTGGCAACATTAA mglA 142202 - 144013 + | sugar ABC transporter ATP-binding protein TERM 311 145569 - 145554 - g 70 -7.6 -3.50133 | overlap 145553 CACTTTGATAAAAAT CAGCTT TATC AAGCTG CACATAAAAAACTTA MS53_0138 144045 - 145607 + | putative sugar ABC transporter permease protein TERM 312 146531 - 146511 - g 83 -7.6 -4.63932 | overlap 146515 CATTTTCTAAGAAAA CAAACGCT CCTGC AGCGCTTG GAGTTATCTACGATA TERM 313 146527 - 146515 - g 72 -4.8 -4.87892 | overlap 146511 TTCTAAGAAAACAAA CGCT CCTGC AGCG CTTGGAGTTATCTAC MS53_0139 145607 - 146560 + | putative sugar ABC transporter permease protein dgk 146563 - 147216 + | deoxyguanosine kinase TERM 314 147705 - 147687 - g 83 -6.8 -4.98911 | TATCATAAAAACAAA GAAGCTTT TAA AAAACTTC ACACCATCTACAAAG TERM 315 147744 - 147725 - g 73 -4.4 -5.0065 | gap 1, overlap 147712 CATCTACAAAGAAAA CTTTGTCAA TCT TTG-CAAAG AATTCAACTTAAAAT MS53_0141 147207 - 147839 + | hypothetical protein TERM 316 147874 - 147842 - T 70 -3.7 -5.14698 | gap 1, opp_overlap 147850, overlap 147848 147850 AAACTTAAAATAAAA CAAAAAGACTAGCA TAAATC TGCTAGT-TTTTTA TTGCATTATTTGTGA TERM 317 147869 - 147848 - T 78 -3 -5.70761 | opp_overlap 147850, overlap 147842 147850 AAAATAAAACAAAAA GACTAGCA TAAATC TGCTAGTT TTTTATTGCATTATT TERM 318 147850 - 147867 + T 88 -5.6 -5.5074 | opp_overlap 147848 147842 147850 AATAAAACAAAAAGA CTAGCA TAAATC TGCTAG TTTTTTATTGCATTA engA 149188 - 147872 - | GTP-binding protein EngA TERM 319 148475 - 148456 - G 95 -12.2 -3.29144 | opp_overlap 148458 TCATTGCCCGCATAA GAGCGTAG TGAT CTACGCTC TCTACCAGCTTACTT TERM 320 148458 - 148473 + g 74 -9 -2.88579 | opp_overlap 148456 ATTGCCCGCATAAGA GCGTAG TGAT CTACGC TCTCTACCAGCTTAC TERM 321 148971 - 148988 + g 82 -6.3 -5.01042 | GCTTGAATTTGAATT TGCTCTT GGAA AGGAGCA TTTTTAATTTCGATT cmk 149847 - 149185 - | cytidylate kinase MS53_0144 150308 - 149844 - | hypothetical protein ftsY 150348 - 151400 + | cell division protein FtsY MS53_0146 151393 - 151626 + | hypothetical protein TERM 322 151655 - 151618 - T 100 -14.5 -5.30575 | opp_overlap 151621 151631, overlap 151621 151631 GAAAAATTTAAAAAA GAATACTAAAAAATGCC TTTT GGCATTTTTTAGTATTT TACTTTGGAAATTAT TERM 323 151652 - 151621 - T 100 -16.2 -4.68528 | opp_overlap 151621 151631, overlap 151618 151631 AAATTTAAAAAAGAA TACTAAAAAATGCC TTTT GGCATTTTTTAGTA TTTTACTTTGGAAAT TERM 324 151621 - 151652 + T 100 -16.2 -4.55128 | opp_overlap 151621 151618 151631, overlap 151631 AAATTTAAAAAAGAA TACTAAAAAATGCC TTTT GGCATTTTTTAGTA TTTTACTTTGGAAAT TERM 325 151631 - 151642 + T 88 -5.8 -5.36314 | opp_overlap 151621 151618 151631, overlap 151621 AAGAATACTAAAAAA TGCC TTTT GGCA TTTTTTAGTATTTTA TERM 326 151642 - 151631 - T 88 -5.8 -5.31545 | opp_overlap 151631 151621, overlap 151621 151618 AAGAATACTAAAAAA TGCC TTTT GGCA TTTTTTAGTATTTTA ptsG 154249 - 151667 - | PTS system, glucose-specific IIABC component TERM 327 152224 - 152244 + g 76 -9.1 -2.97408 | opp_overlap 152229, overlap 152217 152223 152226 GATCTAATTTCCTCA CAGAAGAAG CTT TTTCTTCTG CTTCTTTAGCTGCAA TERM 328 152260 - 152280 + g 75 -5.5 -4.83759 | CTTCTTTAGCTGCAA TTAAATCTC TTT GCGATTTAA TTTTTGAATTTAATT TERM 329 152360 - 152384 + g 82 -9.3 -3.41587 | overlap 152367 TTTCACAGCAACGGC TCCAGCAGCTT TTA GAGCTTCTGGA TTAACTTTTCTAACA TERM 330 153406 - 153396 - G 75 -5.4 -4.86731 | TTTGTTGAAACAAAA GCTT GTA AAGC AGCGTTTAAATCCCC TERM 331 153517 - 153528 + g 78 -5.8 -4.96388 | opp_overlap 153517 AGATAAGTGAGTTAA CACC AACT GGTG TTTTATTTAATGCTT ppa 154803 - 155348 + | inorganic pyrophosphatase TERM 332 155591 - 155581 - g 74 -4 -5.20154 | opp_overlap 155581 155581, overlap 155572 AGATAATCTAAAAAA CTTT TTT AAAG AAAAGAGATTTAAAA pepP 155351 - 156421 + | XAA-Pro aminopeptidase TERM 333 156423 - 156438 + F 86 -3.3 -6.08342 | opp_overlap 156423 AAGACGAAAATTAAA CATTC TTTTTT GAATG TTTTTTTGTTTATTA TERM 334 157234 - 157246 + G 71 -7.7 -3.55203 | CGTTATTTTAGTAGC TAGCC ATG GGCTA TTTACAAAAGGTTTT TERM 335 157492 - 157442 - g 85 -7.2 -4.90477 | opp_overlap 157445, overlap 157445 TATAAAAAATGAAAA GAAGCAATAACTTTATTTAATAAT GGA ATTCAAAAATAAAGTTATTGCTTA TTGTAAAGAACGTAA TERM 336 157489 - 157445 - g 88 -8.9 -4.49041 | opp_overlap 157445, overlap 157442 AAAAAATGAAAAGAA GCAATAACTTTATTTAATAAT GGA ATTCAAAAATAAAGTTATTGC TTATTGTAAAGAACG TERM 337 157445 - 157489 + G 82 -8.9 -3.78934 | opp_overlap 157445 157442 AAAAAATGAAAAGAA GCAATAACTTTATTTAATAAT GGA ATTCAAAAATAAAGTTATTGC TTATTGTAAAGAACG prsA 156485 - 157480 + | ribose-phosphate pyrophosphokinase TERM 338 157816 - 157797 - g 91 -6.6 -5.50723 | opp_overlap 157797 157801 TTAGTAAAACAAAAA TTAACTTT AGAT AAAGTTAA TATCTATAAACAAAG gidB 157518 - 158141 + | glucose-inhibited division protein B TERM 339 158133 - 158150 + T 74 -5.6 -4.81551 | opp_overlap 158126 158133 AAAGACATCAAAAAA CAATCC TAAGTT GGATTG TTTTTGCTATAAATC TERM 340 158150 - 158133 - T 85 -5.6 -5.28755 | opp_overlap 158133, overlap 158126 AAAGACATCAAAAAA CAATCC TAAGTT GGATTG TTTTTGCTATAAATC MS53_0152 159536 - 158157 - | putative mercuric reductase TERM 341 158823 - 158846 + g 80 -7.6 -4.62085 | AAATTTTTCACAAGT GGTATTGAAT TCAA ATTTAATACC TTGTTTTTTGAGAGT TERM 342 158990 - 159002 + g 82 -6.3 -5.00884 | CTATAAAACCAGCAC CTACT ACA AGTAG TTTTTTAGGCAGCGT TERM 343 159127 - 159137 + g 80 -4 -5.72254 | ATTATATTTTTAGCA GTAA GTT TTAC TTTTTTCTTATTTGA TERM 344 159310 - 159325 + g 70 -5.4 -4.59027 | ACATAAGCTTTTTTA CCAGTT TCGT AGCTGG TTTTGTATCCTAGTT TERM 345 159660 - 159643 - R 81 -2.7 -6.07374 | ATAAAAAATAAAAAA TAACCCA ATAG CGAGTTA TTTTAAAATTGATTA pepA-1 161088 - 159673 - | leucyl aminopeptidase pepA 162539 - 161157 - | leucyl aminopeptidase TERM 346 162769 - 162750 - H 82 -9.4 -3.59405 | opp_overlap 162753, overlap 162753 AAAATTATGATATAA TAAGTTCC TATT GGAACTTA AATCCTAGAAATGTA TERM 347 162766 - 162753 - H 71 -6.7 -3.91332 | opp_overlap 162753, overlap 162750 ATTATGATATAATAA GTTCC TATT GGAAC TTAAATCCTAGAAAT MS53_0155 162891 - 164354 + | hypothetical protein MS53_0156 164364 - 164921 + | hypothetical protein TERM 348 165041 - 165010 - g 100 -12.6 -3.10028 | opp_overlap 165009, overlap 165018 ATTAATATCTTAAGA CTTTCAAAGCAAAA CGTT TTTTACTTTGAAAG ATCACTTCAAGCAAA MS53_0157 164911 - 165810 + | hypothetical protein MS53_0158 166274 - 168481 + | hypothetical protein TERM 349 168883 - 168871 - g 71 -4.1 -5.12617 | overlap 168859 CAACCACTTAAAAAA CAGCT TTT AACTG GCTACGTTGTAGTTG TERM 350 169640 - 169606 - g 88 -9.6 -4.43911 | overlap 169607 AAACGTCAAGCAAAA CTTTCATCACTTAAAT ATG ATTTAAATGATGAAAC CAACGCACTAATTGT TERM 351 169639 - 169607 - g 100 -13.1 -3.25262 | overlap 169606 AACGTCAAGCAAAAC TTTCATCACTTAAAT ATG ATTTAAATGATGAAA CCAACGCACTAATTG atpA-2 168481 - 170025 + | F0F1 ATP synthase subunit alpha TERM 352 170553 - 170530 - g 82 -2.4 -5.9667 | AAAAAGATAAAAAAA CAACTTCAAT TTTC ATCGGAGCTG GAGAACGTTCAAGAG TERM 353 171093 - 171077 - g 74 -8.1 -3.70108 | overlap 171075 AATCGGAAAAGAACA CTACAAT GCA ATTGTAG AAGCTAAGAAAATTC TERM 354 171261 - 171227 - g 91 -10.2 -4.36914 | opp_overlap 171225 CTTCTTCTCACAAAA CTTTTTCATGACAGAA CAT TTCACTCATGAAAAAG GAGTATTTGTTCCTT atpD-2 170025 - 171437 + | F0F1 ATP synthase subunit beta TERM 355 171484 - 171440 - T 100 -11.7 -4.24404 | opp_overlap 171448 171455, overlap 171448 171455 AGCTAAAGCTTAAAA TCCCTAAACAAAAAACCGAAA TAG TTTCGGTTTTTTGTTTAGCCT GCTATCTCATTGAAA TERM 356 171476 - 171448 - T 100 -16.3 -3.66666 | opp_overlap 171448 171455, overlap 171440 171455 CTTAAAATCCCTAAA CAAAAAACCGAAA TAG TTTCGGTTTTTTG TTTAGCCTGCTATCT TERM 357 171448 - 171476 + T 100 -16.3 -3.63336 | opp_overlap 171448 171440 171455, overlap 171455 CTTAAAATCCCTAAA CAAAAAACCGAAA TAG TTTCGGTTTTTTG TTTAGCCTGCTATCT TERM 358 171469 - 171455 - T 100 -8.6 -5.63517 | opp_overlap 171448 171455, overlap 171448 171440 TCCCTAAACAAAAAA CCGAAA TAG TTTCGG TTTTTTGTTTAGCCT TERM 359 171455 - 171469 + T 100 -8.6 -5.64421 | opp_overlap 171455 171448 171440, overlap 171448 TCCCTAAACAAAAAA CCGAAA TAG TTTCGG TTTTTTGTTTAGCCT TERM 360 171548 - 171520 - T 79 -8.1 -3.89614 | opp_overlap 171513 171512 171521, overlap 171521 TTTAAGGCTGATAAA TCCTGAGCTTCCA ACT TGGAAACGCAGGT TAATCACTTTTTAAT TERM 361 171547 - 171521 - T 87 -11.6 -2.93447 | opp_overlap 171513 171512 171521, overlap 171520 TTAAGGCTGATAAAT CCTGAGCTTCCA ACT TGGAAACGCAGG TTAATCACTTTTTAA TERM 362 171521 - 171547 + T 80 -9.4 -3.29973 | opp_overlap 171521 171520, overlap 171513 171512 TTAAGGCTGATAAAT CCTGAGCTTCCA ACT TGGAAACGCAGG TTAATCACTTTTTAA MS53_0161 172858 - 171548 - | putative type III restriction-modification system: methylase TERM 363 171643 - 171627 - G 72 -6.7 -4.14739 | opp_overlap 171609 TTATTGATTCCAAAA TCAAAAA GCA TTTTTGA AACCTTATTTACTAT TERM 364 172558 - 172544 - G 81 -8.6 -4.25056 | opp_overlap 172540 GACTTTATTAATAAA GGAAGT ATT ACTTCC TGGACCTCTTTTTTT MS53_0162 174161 - 173238 - | hypothetical protein rpmF 174257 - 174457 + | 50S ribosomal protein L32 TERM 365 174460 - 174489 + F 73 -3.7 -5.31456 | opp_overlap 174462 174468, overlap 174468 CAGAGTTCAATAAAA TGGAAAAAGAACG CATT TGTTCTTTTTTTG TTTTTTATAGATTAA TERM 366 174468 - 174481 + F 93 -3.1 -6.28401 | opp_overlap 174468 174462, overlap 174460 AATAAAATGGAAAAA GAACG CATT TGTTC TTTTTTTGTTTTTTA ruvA 174530 - 175126 + | Holliday junction DNA helicase motor protein TERM 367 176012 - 175995 - g 70 -5.6 -4.28651 | opp_overlap 176009, overlap 176007 ACTAAAACCTCAAAA GGAAGA ATGATA TCTTCC AAAGGAATAACTTAT ruvB 175140 - 176054 + | Holliday junction DNA helicase B TERM 368 176113 - 176095 - f 70 -6.2 -4.09805 | opp_overlap 176078, overlap 176084 AAAATAAAAAATTAA TTTTTATA TAA TATAAAAA CATATGAAACAAAGG TERM 369 176233 - 176246 + F 88 -5.2 -5.59655 | opp_overlap 176233 GTGTTTCCCACTTAA GCCC TATTTT GGGC TTTTTTATTACTTTA TERM 370 176260 - 176291 + F 93 -10.6 -4.5477 | opp_overlap 176284, overlap 176286 GCTTTTTTATTACTT TATTTATATATTTA TTAT TAAATATATAAATA TTTTATAGTCTATTA TERM 371 177350 - 177332 - f 93 -9 -4.81357 | ATACTAGAAAACAAA TTATCACT TAT AGTGATAA AAGAGCCAAAAAAGA TERM 372 177944 - 177929 - f 75 -3.4 -5.5943 | opp_overlap 177929, overlap 177938 AAATCATTAAAAAAA TATTAA ATAT TTAATA ATTATTAAAAACAAA TERM 373 177956 - 177984 + F 76 -4 -5.59357 | opp_overlap 177956 AATAATTATTAAAAA CAAATACTGTTT GCATA AAACGATATTTG TTTTTTTAGTCTACT TERM 374 178198 - 178180 - f 70 -6.2 -4.09805 | opp_overlap 178163, overlap 178169 AAAATAAAAAATTAA TTTTTATA TAA TATAAAAA CATATGAAACAAAGG TERM 375 178524 - 178509 - g 72 -6.2 -4.32491 | opp_overlap 178507 178509 ATGGAAAAATAAGAA TTACCA AAGC TGGTAA TGTTACTAATGCTCA TERM 376 180546 - 180531 - g 72 -6.2 -4.34345 | opp_overlap 180518 180531 180530 CAGATACTATTAAAA GAAGTA TCTA TACTTC ATTTACTACCATCTT secD 178202 - 180796 + | bifunctional preprotein translocase subunit SecD/SecF TERM 377 180800 - 180811 + F 82 -4.4 -5.80727 | opp_overlap 180800, overlap 180784 TTTAACTATTAAAAA TAGC TGAG GCTA TTTTTTCTTCTTTTT TERM 378 181393 - 181425 + G 71 -8 -3.22388 | gap 1, opp_overlap 181392 181393 181417, overlap 181397 181417 TATCAAATGCTAAAG CTAAGGTAGCTGAAT ATGA ATTTA-CTACCTTAG TTCCTCAGTTAGGTC TERM 379 181833 - 181857 + G 73 -8.7 -3.06515 | overlap 181832 181835 TTAGAAAAAACCTCA CATCTTCAAAT AAA AATTGAAGATG ATTTTGAAACTGAAG obgE 180846 - 182120 + | GTPase ObgE trpS 182120 - 183112 + | tryptophanyl-tRNA synthetase TERM 380 184845 - 184826 - g 75 -5.8 -4.64144 | AAGAATTTTCAAAAA TGCTTCTA GAAT TAAAAGCA AGTCATGAATAAAGC thrS 183112 - 184857 + | threonyl-tRNA synthetase TERM 381 184900 - 184914 + G 72 -3.6 -5.25735 | overlap 184901 ATGAATTAAAAACCG TCAATT TAT AATTGG TTTTTGATTTTTTAC MS53_0171 184850 - 185341 + | hypothetical protein TERM 382 185339 - 185370 + F 73 -6.1 -4.73108 | opp_overlap 185339, overlap 185345 185351 185369 AAAATTACAAAAAAC TAAAAGTTGTCAT GTCAAA GTGACAATTTTTA TTTTAATTTTGTAAA TERM 383 185345 - 185364 + F 71 -2.9 -5.56372 | opp_overlap 185339, overlap 185339 185351 ACAAAAAACTAAAAG TTGTCAT GTCAAA GTGACAA TTTTTATTTTAATTT MS53_0172 185407 - 186906 + | hypothetical protein TERM 384 186949 - 186904 - T 100 -14.5 -3.81755 | gap 1, opp_overlap 186905 186906 186907, overlap 186906 186907 186918 ATTCTTGAAATAGAA TAGCAACTAAAAAAGCTTTAGA AAT TCTAAAGCTTTTTTAGTTGG-A TTTTTATTTGTAAGG TERM 385 186905 - 186949 + T 100 -16.1 -5.38054 | opp_overlap 186904 186906 186907 186918, overlap 186906 186907 TTCTTGAAATAGAAT AGCAACTAAAAAAGCTTTAGA AAT TCTAAAGCTTTTTTAGTTGGA TTTTTATTTGTAAGG TERM 386 186906 - 186948 + T 100 -19.6 -3.81748 | opp_overlap 186904 186906 186907 186918, overlap 186905 186907 TCTTGAAATAGAATA GCAACTAAAAAAGCTTTAGA AAT TCTAAAGCTTTTTTAGTTGG ATTTTTATTTGTAAG TERM 387 186948 - 186906 - T 100 -19.6 -3.49232 | opp_overlap 186906 186905 186907, overlap 186904 186907 186918 TCTTGAAATAGAATA GCAACTAAAAAAGCTTTAGA AAT TCTAAAGCTTTTTTAGTTGG ATTTTTATTTGTAAG TERM 388 186907 - 186947 + T 100 -23.1 -2.87964 | opp_overlap 186906 186904 186907 186918, overlap 186906 186905 CTTGAAATAGAATAG CAACTAAAAAAGCTTTAGA AAT TCTAAAGCTTTTTTAGTTG GATTTTTATTTGTAA TERM 389 186947 - 186907 - T 100 -23.1 -2.69057 | opp_overlap 186907 186906 186905, overlap 186906 186904 186918 CTTGAAATAGAATAG CAACTAAAAAAGCTTTAGA AAT TCTAAAGCTTTTTTAGTTG GATTTTTATTTGTAA TERM 390 186936 - 186918 - T 100 -10.4 -5.31059 | opp_overlap 186907 186906 186905, overlap 186907 186906 186904 ATAGCAACTAAAAAA GCTTTAGA AAT TCTAAAGC TTTTTTAGTTGGATT hit 187273 - 186953 - | HIT-like protein MS53_0174 188469 - 187273 - | putative P60-like lipoprotein TERM 391 187347 - 187361 + g 70 -4.9 -4.67556 | CTAGTAAATATCCTA GCGCT ACAAA GGCGC TTTTTGCGGTGTTAT MS53_0175 190583 - 188469 - | putative membrane protein P80 TERM 392 190430 - 190408 - G 91 -10.6 -4.35524 | opp_overlap 190407 190408 190403, overlap 190409 CCTTTAAAGGTAAAA GCAGTTGACG AAT CGTCAACTGG GCTTATTACTGTAAC TERM 393 190429 - 190409 - G 100 -14.1 -3.20832 | opp_overlap 190407 190408 190403, overlap 190408 CTTTAAAGGTAAAAG CAGTTGACG AAT CGTCAACTG GGCTTATTACTGTAA TERM 394 190857 - 190845 - g 77 -7.7 -4.09685 | opp_overlap 190845 190844 CTTTATTTTTCAAAA GAGCT ACA AGCTC CTTTTGAAATTGCAC TERM 395 191066 - 191048 - g 77 -5.4 -5.1166 | TAGCAAAACCAAAAA GTTAATTT ATA AAATCAAC CAAAGCTCAAAGCAT MS53_0176 190716 - 191279 + | hypothetical protein TERM 396 191255 - 191279 + T 93 -3.8 -6.32976 | opp_overlap 191277, overlap 191249 ACTGCCATATTTAAA TTATTTTGAA GAAAA TTTAAAATAA TTTTTTTATTTTTTT TERM 397 191315 - 191280 - T 82 -8 -4.31549 | overlap 191277 GAAAATTTAAAATAA TTTTTTTATTTTTTTT AAAA AAAGAAAATAAAAAAA GCAGCTCCCGATTTT TERM 398 191561 - 191589 + T 100 -9.7 -5.15117 | opp_overlap 191561 GGAATGAAGAAAAAA CGAATACGCCT TATTTAT AGGTGTATTCG TTTTTTGCGCTTTTA TERM 399 191589 - 191561 - T 100 -7.5 -5.5604 | opp_overlap 191561 GGAATGAAGAAAAAA CGAATACGCCT TATTTAT AGGTGTATTCG TTTTTTGCGCTTTTA MS53_0177 192164 - 191607 - | putative transposase ISMHp1-like MS53_0178 193159 - 192128 - | putative transposase ISMHp1-like TERM 400 192299 - 192283 - GR 74 -8.1 -3.59979 | opp_overlap 192282 192285 TGTTTTTAGCTCAAA TAGATTC GAC GAATCTA GATTTAGTAAAATAC TERM 401 193347 - 193320 - R 93 -6.6 -5.43514 | gap 1, overlap 193321 193322 193324 AAAATAATTAAAAAA TGTACTTATATAC TGT GTATATAAGTA-A TAAGGTAAAAGGTAT TERM 402 193347 - 193321 - R 76 -8.2 -3.82448 | overlap 193320 193322 193324 AAATAATTAAAAAAT GTACTTATATAC TGT GTATATAAGTAA TAAGGTAAAAGGTAT TERM 403 193346 - 193322 - R 87 -11.7 -2.87029 | overlap 193320 193321 193324 AATAATTAAAAAATG TACTTATATAC TGT GTATATAAGTA ATAAGGTAAAAGGTA TERM 404 193344 - 193324 - R 79 -9.9 -2.95904 | overlap 193322 193320 193321 TAATTAAAAAATGTA CTTATATAC TGT GTATATAAG TAATAAGGTAAAAGG TERM 405 193389 - 193369 - R 80 -4.7 -5.35222 | overlap 193372 AAAAGGTATAAAAAA GAGCTTCCA ACT TGGAAATTC AGGTTTTTTGTTTTT MS53_0179 194042 - 193410 - | putative chromate transport protein MS53_0180 194671 - 194072 - | putative chromate transport protein TERM 406 194743 - 194725 - R 73 -6.8 -4.16016 | overlap 194726 TTATTTTTTAAGAAA CGCTAAAA CGT TTTTAGCA ATGCTTTGAGCTTCA tktA 196650 - 194710 - | transketolase TERM 407 194745 - 194763 + g 72 -6 -4.61873 | opp_overlap 194745, overlap 194746 AAACGTTTTTAGCAA TGCTTTGA GCT TCAAAGCC TTTTAGTTTATAAAC TERM 408 194746 - 194762 + g 82 -9.5 -3.36401 | opp_overlap 194745, overlap 194745 AACGTTTTTAGCAAT GCTTTGA GCT TCAAAGC CTTTTAGTTTATAAA TERM 409 194906 - 194923 + g 83 -7.7 -4.63107 | overlap 194877 194908 194912 GGCGCTTTATTTAGG CCTAGTG AAAG CGCTAGG TTTTCGTTATTTACT TERM 410 195166 - 195190 + g 71 -7.2 -3.72315 | overlap 195165 195167 AACTTGATCTTTTTT AGCATTTAGC GCATA GCTAAATGCG TGTTTTACCTCTGAT TERM 411 195167 - 195189 + g 86 -10.7 -2.82666 | overlap 195166 195165 ACTTGATCTTTTTTA GCATTTAGC GCATA GCTAAATGC GTGTTTTACCTCTGA hemK 197384 - 196659 - | protoporphirogen oxidase HemK TERM 412 196997 - 196958 - G 75 -9.6 -2.63913 | opp_overlap 196963, overlap 196963 196994 GAGGATTGCATATTA TCAAATTGAATTTCTGAT TCAC ATTAGAAAATCAATTTGA ATGAATCAAGCCAAT TERM 413 197046 - 197083 + g 77 -7.9 -4.12188 | gap 1, overlap 197050 AGCGTTTTTACTTGC TTGACGC-AGCGCTATTT TTG AAATATCGCTAGCGTAAA TTTTAGCGCTACTAA TERM 414 197050 - 197079 + g 70 -8.7 -2.75081 | gap 1, overlap 197046 TTTTTACTTGCTTGA CGC-AGCGCTATTT TTG AAATATCGCTAGCG TAAATTTTAGCGCTA TERM 415 197085 - 197099 + g 73 -2.9 -5.5112 | opp_overlap 197085 ATCGCTAGCGTAAAT TTTAG CGCTA CTAAA TTTTTTCTTAATAGC TERM 416 197339 - 197309 - G 74 -8.5 -3.15249 | opp_overlap 197314, overlap 197314 GATAGTTTTTACTAA GCAAATTTAACTC TTTTT GAGTTAAATTTTC GCTAAGTCCATATTT TERM 417 197314 - 197334 + g 75 -7 -4.19817 | opp_overlap 197309 197314 TTTTTACTAAGCAAA TTTAACTC TTTTT GAGTTAAA TTTTCGCTAAGTCCA TERM 418 197334 - 197314 - G 72 -7 -3.95584 | opp_overlap 197314, overlap 197309 TTTTTACTAAGCAAA TTTAACTC TTTTT GAGTTAAA TTTTCGCTAAGTCCA prfA 198463 - 197384 - | peptide chain release factor 1 TERM 419 197932 - 197944 + g 77 -6.3 -4.67234 | opp_overlap 197932 CTGATTCAAATTTAA GCTTA GAA TAAGC TTTTTCACCTTGAAT TERM 420 198174 - 198210 + g 74 -6.8 -4.33621 | gap 1 AGTACCTTTAACTTT TCT-TCAAGCTCAAGCT GCTT ACTTTGAGCTTGAGAGA TTTCTTCCTTGGCTA TERM 421 198500 - 198485 - H 100 -9 -5.61881 | TTCTAAAAATAAAAA GCTTCC GCTG GGAAGC TAGGTCACATTTGTG TERM 422 199108 - 199081 - g 78 -8.5 -3.8772 | opp_overlap 199086, overlap 199076 199086 199098 ATTATAAAAATAATA TAAAAGCAGGC TTAAAG GCCTGCTTTTT AACAAAGGAGACACA TERM 423 199103 - 199086 - g 95 -8.4 -4.90321 | opp_overlap 199086, overlap 199081 199076 199098 AAAAATAATATAAAA GCAGGC TTAAAG GCCTGC TTTTTAACAAAGGAG TERM 424 199086 - 199103 + G 88 -9.1 -4.56597 | opp_overlap 199086 199081 199076 199098 AAAAATAATATAAAA GCAGGCT TAAA GGCCTGC TTTTTAACAAAGGAG oppB 199080 - 200195 + | putative oligopeptide transport system permease protein oppC 200246 - 201184 + | oligopeptide transport system permease protein TERM 425 201317 - 201359 + G 100 -12.2 -3.93136 | opp_overlap 201317 TTAGGCATCTAGATA TCGTATATGGCTCAGGATTT AAA AAATTCAGAGCCATAAATGA TTTATCACTAAATAT TERM 426 201755 - 201745 - g 71 -2.4 -5.43487 | opp_overlap 201745, overlap 201738 AAAGGATATAAAAAA GAGC TTT GCAC ATTTTTAAAAGTTGC TERM 427 201994 - 201982 - g 70 -6.3 -4.16943 | GTTGACATTTTAAAA CAAGT AGG ACTTG ATAAATCAGTTCTTA TERM 428 202730 - 202714 - g 95 -12.3 -3.64599 | CCATTAGATCCTAAA GCAGCAG CGC CTGCTGC AAAGGAAGCACCTAA TERM 429 202847 - 202832 - g 70 -3.2 -5.23765 | opp_overlap 202833, overlap 202833 TAAATAATACAAAAA CCGCTA AAGA TAGCGT ACTTGAAGAATTTAG MS53_0186 201190 - 202947 + | putative oligopeptide ABC transporter ATP-binding protein OppF TERM 430 203135 - 203101 - g 81 -8.8 -4.19947 | overlap 203134 GAAAATAATTACAAA TCTTTTTTAGAAAAGC TAA GATTTGCTAAAAAAGA ATTCAGAATTCAAGA TERM 431 203146 - 203134 - g 74 -4.9 -5.02476 | overlap 203101 AGATTTGCTAAAAAA GAATT CAG AATTC AAGATTTTATTAAAA TERM 432 204179 - 204155 - g 75 -5.8 -4.68593 | gap 1, overlap 204156 204157 CTCACTACGTAAAAA GTGCGCTTCTT GATG AAAAAGCGC-C TAAATACGAACTTCC TERM 433 204178 - 204157 - g 75 -9.5 -2.63922 | overlap 204155 204156 CACTACGTAAAAAGT GCGCTTCTT GATG AAAAAGCGC CTAAATACGAACTTC oppD 202954 - 204255 + | oligopeptide ABC transporter ATP-binding protein OppD TERM 434 204489 - 204477 - g 100 -7.7 -5.80817 | opp_overlap 204477 TTCAAGATAAAAAAA CTAGC GTT GCTAG TTTTGGAAAATACCA TERM 435 204477 - 204489 + G 77 -7.7 -4.09685 | opp_overlap 204477 TTCAAGATAAAAAAA CTAGC GTT GCTAG TTTTGGAAAATACCA TERM 436 205893 - 205919 + G 79 -9.5 -3.28416 | opp_overlap 205896, overlap 205896 CTGTTAAAAGTGATG CAACTGATGCT ATGGC AGCAACAGTTG TTGATCTAAATGATA MS53_0188 204266 - 210175 + | hypothetical protein TERM 437 210313 - 210303 - g 70 -6.8 -3.88787 | GCAGACGCTTACAAA GTGC CAA GCAC AAAAAGTGATAACGT MS53_0189 210264 - 210551 + | hypothetical protein MS53_0190 210563 - 213247 + | putative lipoprotein TERM 438 213267 - 213284 + T 81 -2.7 -6.12458 | AAATAATTAAAAAAA TGTTAGT TAAT GCTAGCA TTTTTTCTTTTTTTA TERM 439 213313 - 213347 + T 79 -8 -3.93658 | opp_overlap 213309, overlap 213314 TAATATATAATTATT ATGCAGTTACTTTACA TTT TGTAAATTAGCTGCAA TTATTTCAAAATATT TERM 440 213314 - 213346 + T 90 -11.5 -2.95472 | opp_overlap 213309, overlap 213313 AATATATAATTATTA TGCAGTTACTTTACA TTT TGTAAATTAGCTGCA ATTATTTCAAAATAT TERM 441 213808 - 213835 + T 82 -10 -3.40108 | opp_overlap 213814, overlap 213814 CAAAATAACTAGTAT AAAAAATCAGCC ATTT GGCTGATTTTTC GTTTATTTTGAAATT TERM 442 213829 - 213814 - T 100 -9 -5.33785 | opp_overlap 213814 213808 AACTAGTATAAAAAA TCAGCC ATTT GGCTGA TTTTTCGTTTATTTT TERM 443 213814 - 213829 + T 100 -9 -5.1517 | opp_overlap 213814, overlap 213808 AACTAGTATAAAAAA TCAGCC ATTT GGCTGA TTTTTCGTTTATTTT MS53_0191 215687 - 213849 - | hypothetical protein MS53_0192 216166 - 215696 - | hypothetical protein TERM 444 216033 - 216019 - G 71 -7.2 -3.71284 | GTGTTACGAAGATAA TTGTAG CAC CTACAA ACGCAAGAGCTAGCT TERM 445 216319 - 216368 + H 89 -10.6 -3.75024 | gap 1, opp_overlap 216329 216333, overlap 216314 ACAATCCACCTATTA TTTATT-ATAATATATTCTAAGG AAATA CCTTAGGATGTATTATGAATAAA TTATTAATCGTAAAA TERM 446 216435 - 216457 + G 72 -3.4 -5.28755 | opp_overlap 216435 216438, overlap 216425 216438 TTTAAAAATAAAAAA GATGCTAG TTTATTT CTAGCCTC TTTTTTAGTATCTTT TERM 447 216457 - 216435 - g 90 -3.4 -5.93252 | opp_overlap 216435 216425 216438, overlap 216438 TTTAAAAATAAAAAA GATGCTAG TTTATTT CTAGCCTC TTTTTTAGTATCTTT TERM 448 216657 - 216639 - g 76 -4.6 -5.243 | GAAACTAGCAAAAAA TCATATAG ATA CTTTATGA ATGAAAATTTATTTT nagB 216417 - 217118 + | glucosamine-6-phosphate isomerase TERM 449 217320 - 217293 - g 78 -10.2 -2.66964 | opp_overlap 217291 CCATGGAGGATATGA TTTTTCTTTTAA CGAT TTAAAAGAAAAA AATATTCAAGATAAA TERM 450 218162 - 218188 + G 71 -8.3 -3.18429 | opp_overlap 218162, overlap 218166 TAGGTAGAATAAAAA TTAATACAAAA GCAAA TTTTGTATTAA TTGATAAAGATTTTA TERM 451 218188 - 218162 - g 93 -8.3 -5.20333 | opp_overlap 218162 218166 TAGGTAGAATAAAAA TTAATACAAAA GCAAA TTTTGTATTAA TTGATAAAGATTTTA nagA 217168 - 218250 + | N-acetylglucosamine 6-P deacetylase nagC 219094 - 218237 - | N-acetylmannosamine kinase TERM 452 218272 - 218294 + g 85 -7 -4.88067 | overlap 218291 GTTTTAAAAAATATG TAGCGCCG ATTATTC CGGCGTTA TTTTTATAACTAGCT TERM 453 218305 - 218321 + g 71 -8.1 -3.31232 | opp_overlap 218304 218305, overlap 218304 CGTTATTTTTATAAC TAGCTTT AGA AAAGCTA ATTTTATATGGAGAA TERM 454 218928 - 218949 + g 73 -3 -5.45726 | CCTGCTGATGATATT GCTACG TAGTCAAAAT CGTAGC TTTTTTTGGCCTCTA TERM 455 218983 - 218998 + g 71 -2.6 -5.46698 | overlap 218973 TTAGCTTTTCAACCT GAAAGA TCAT TTTTTC TTTTTTGGTTTTAAC TERM 456 219193 - 219177 - g 78 -8.1 -3.98214 | ATGATTTACGATAAA CTTGAAA ATA TTTCAAG GTATCAAAATTTAAA TERM 457 219582 - 219566 - g 73 -8.1 -3.35224 | opp_overlap 219564 219568 219581, overlap 219564 ACATGTTCCTAAATA TATCTCT TCT AGAGATA AATTTAAAAAATTTG MS53_0196 219162 - 219617 + | hypothetical protein MS53_0197 219617 - 220312 + | N-acetylmannosamine-6-phosphate 2-epimerase TERM 458 220598 - 220581 - g 70 -6.3 -4.21744 | gap 1, overlap 220583 ATTGAAGAAACCAAA GAGCTAGC TAA GCTAGC-C AAAGAGCTAAAATAC TERM 459 220597 - 220583 - g 86 -10 -3.69681 | overlap 220581 TGAAGAAACCAAAGA GCTAGC TAA GCTAGC CAAAGAGCTAAAATA nanA 220332 - 221195 + | N-acetylneuraminate lyase TERM 460 221246 - 221201 - T 75 -4.3 -5.093 | gap 1, opp_overlap 221204 221208 221215, overlap 221205 221208 221215 TCTAAAATAATAAAA TTCAC-AATTAAAAATCACCAA ATT CTGGTGATTTTTAATTAGCTTA TTTTGCTTTTGATTA TERM 461 221204 - 221243 + T 78 -7.5 -4.43392 | gap 1, opp_overlap 221201 221205 221208 221215, overlap 221208 221215 AAAATAATAAAATTC AC-AATTAAAAATCACCA AATTC TGGTGATTTTTAATTAGC TTATTTTGCTTTTGA TERM 462 221241 - 221205 - T 100 -14.1 -2.89538 | opp_overlap 221204 221208 221215, overlap 221201 221208 221215 AAATAATAAAATTCA CAATTAAAAATCACCAA ATT CTGGTGATTTTTAATTA GCTTATTTTGCTTTT TERM 463 221238 - 221208 - T 100 -13.6 -3.55907 | opp_overlap 221204 221208 221215, overlap 221205 221201 221215 TAATAAAATTCACAA TTAAAAATCACCAA ATT CTGGTGATTTTTAA TTAGCTTATTTTGCT TERM 464 221208 - 221238 + T 100 -12.9 -3.38158 | opp_overlap 221208 221205 221201 221215, overlap 221204 221215 TAATAAAATTCACAA TTAAAAATCACCA AATTC TGGTGATTTTTAA TTAGCTTATTTTGCT TERM 465 221231 - 221215 - T 90 -7.3 -4.93968 | opp_overlap 221215 221208 221204, overlap 221208 221205 221201 ATTCACAATTAAAAA TCACCAA ATT CTGGTGA TTTTTAATTAGCTTA TERM 466 221215 - 221231 + T 79 -6.6 -4.90013 | opp_overlap 221208 221205 221201 221215, overlap 221208 221204 ATTCACAATTAAAAA TCACCA AATTC TGGTGA TTTTTAATTAGCTTA TERM 467 221274 - 221284 + T 74 -5.4 -4.76892 | opp_overlap 221267 221274 TTAACTAACCACAAA GACT CTA AGTC TTTTTAGGTTGATGT MS53_0199 224099 - 221259 - | hypothetical protein TERM 468 222334 - 222344 + g 71 -4 -5.01042 | TCGACTGTAATAGGT TTTG CTA CAAA TTTTTGATTTAGATT gap 225282 - 224278 - | glyceraldehyde-3-P dehydrogenase TERM 469 224909 - 224886 - G 78 -9.6 -3.01918 | opp_overlap 224906, overlap 224883 224888 TTACGTTATAAACCA CAGTAGGAAG ATCG CTTCCTGCTG GCGCTGAAATTAAAA TERM 470 225367 - 225338 - R 100 -12.4 -4.54821 | opp_overlap 225345, overlap 225345 ACCGTAATTATAAAA CAAAAAAGCCAA AAATAG TTGGCTTTTTTG TAAAACATTTTGGGG TERM 471 225360 - 225345 - R 90 -4.7 -5.86976 | opp_overlap 225345, overlap 225338 TTATAAAACAAAAAA GCCAA AAATAG TTGGC TTTTTTGTAAAACAT TERM 472 225345 - 225360 + r 77 -4.7 -5.24531 | opp_overlap 225345 225338 TTATAAAACAAAAAA GCCAA AAATAG TTGGC TTTTTTGTAAAACAT MS53_0201 227291 - 225402 - | putative phase-variable hemagglutinin TERM 473 225627 - 225645 + g 77 -5.4 -5.1861 | TCCTTGGATTTGCTG TAAGAATA CGT TGTTCTTA TTTTTTACTACTAAA TERM 474 226130 - 226156 + g 95 -11 -4.371 | TGTATCCATCTTGTG CTGCAACTGTAA ATG TTACAGTTGGAG TTTTAATATCATCAC TERM 475 226391 - 226408 + g 80 -5.6 -5.13343 | GTGTACGATCAGCGT CAGCTT TATAGT AAGCTG TTTTATTTTCGGTTG TERM 476 226820 - 226832 + g 70 -7.7 -3.45031 | CGTCATAGTATTTTT GTGGA TAA TCCAC TTGCATTTTTAGACC TERM 477 227555 - 227581 + r 95 -11 -4.371 | TGTAGCCTTCTTTTG CTGCAACTGTAA ATG TTACAGTTGGAG TTTTAATATCATCAC MS53_0203 228750 - 227833 - | putative phase-variable hemagglutinin TERM 478 228112 - 228130 + g 77 -5.4 -5.1861 | TCCTTGGATTTGCTG TAAGAATA CGT TGTTCTTA TTTTTTACTACTAAA TERM 479 228627 - 228653 + g 95 -11 -4.371 | TGTAGCCTTCTTTTG CTGCAACTGTAA ATT TTACAGTTGGAG TTTTAATATCATCAC MS53_0204 229822 - 228905 - | putative phase-variable hemagglutinin TERM 480 229184 - 229202 + g 77 -5.4 -5.1861 | TCCTTGGATTTGCTG TAAGAATA CGT TGTTCTTA TTTTTTACTACTAAA TERM 481 229699 - 229725 + g 95 -11 -4.371 | TGTAGCCTTCTTTTG CTGCAACTGTAA ATT TTACAGTTGGAG TTTTAATATCATCAC MS53_0205 231086 - 229977 - | putative phase-variable hemagglutinin TERM 482 231166 - 231209 + r 89 -10.4 -3.72742 | overlap 231168 231170 231173 231199 GTTTCTTCTGTTCCT GTTGCAACTCTAACTGTAGC TGAA GCTGCAGTTGAAGTTGTATC TTCTATTGCTGATGG TERM 483 231168 - 231207 + r 90 -11.6 -3.44124 | overlap 231166 231170 231173 231199 TTCTTCTGTTCCTGT TGCAACTCTAACTGTAGC TGAA GCTGCAGTTGAAGTTGTA TCTTCTATTGCTGAT TERM 484 231170 - 231205 + r 91 -12 -3.28453 | overlap 231168 231166 231173 231199 CTTCTGTTCCTGTTG CAACTCTAACTGTAGC TGAA GCTGCAGTTGAAGTTG TATCTTCTATTGCTG TERM 485 231173 - 231202 + r 76 -7.9 -3.76582 | overlap 231170 231168 231166 231199 CTGTTCCTGTTGCAA CTCTAACTGTAGC TGAA GCTGCAGTTGAAG TTGTATCTTCTATTG MS53_0206 232423 - 231410 - | putative phase-variable hemagglutinin MS53_0207 233148 - 232474 - | putative phase-variable hemagglutinin MS53_0208 233500 - 233138 - | putative phase-variable hemagglutinin MS53_0209 234501 - 233554 - | putative phase-variable hemagglutinin TERM 486 234270 - 234296 + g 95 -11 -4.371 | TGTAGCCTTCTTTTG CTGCAACTGTAA ATT TTACAGTTGGAG TTTTAATATCATCAC MS53_0210 235379 - 234552 - | putative phase-variable hemagglutinin TERM 487 235256 - 235282 + g 95 -11 -4.09739 | TGTATCCATCTTGTG CTGCAACTGTAA AAT TTACAGTTGGAG TTTTAACAGCATTAG MS53_0211 236643 - 235543 - | putative phase-variable hemagglutinin TERM 488 235807 - 235825 + g 77 -5.4 -5.1675 | ACCTTTTATTTGTTG TAAGAATA CGT TGTTCTTA TTTTTTAGTAAATCG TERM 489 236871 - 236889 + r 81 -5.4 -5.1861 | TCCTTGGATTTGCTG TAAGAATA CGT TGTTCTTA TTTTTTACTACTAAA MS53_0215 237702 - 237340 - | putative phase-variable hemagglutinin MS53_0216 239714 - 237756 - | putative phase-variable hemagglutinin TERM 490 238432 - 238418 - G 72 -7.2 -4.07133 | opp_overlap 238417 GATTTTCATAAAGAA CTCTAA TAG TTAGAG AGATTTGTTTAGAAT TERM 491 238636 - 238658 + g 73 -7.8 -3.79451 | overlap 238637 238649 ACTAAAGTAAATTTG TCTTGATTTG CTG CAAATCAAGC TTCTAGTTTTGTTTT TERM 492 238637 - 238657 + g 89 -11.3 -2.85231 | overlap 238636 238649 CTAAAGTAAATTTGT CTTGATTTG CTG CAAATCAAG CTTCTAGTTTTGTTT TERM 493 239198 - 239210 + g 70 -7.7 -3.45031 | CATCGTAGTATTTTT GTGGA TAA TCCAC TTGCATTTTTAGACC MS53_0217 240185 - 239715 - | putative phase-variable hemagglutinin TERM 494 239933 - 239959 + g 95 -11 -4.371 | TGTAGCCTTCTTTTG CTGCAACTGTAA ATG TTACAGTTGGAG TTTTAATATCATCAC MS53_0219 241281 - 240538 - | putative phase-variable hemagglutinin TERM 495 240905 - 240891 - G 76 -7.2 -4.37658 | AATCTTTGTATAAAA CTCTTA TAG TAAGAG TTACGCTAGTAGCTG MS53_0220 242210 - 241311 - | putative phase-variable hemagglutinin TERM 496 242044 - 242030 - G 72 -7.2 -4.07133 | opp_overlap 242029 GATTTTCATAAAGAA CTCTAA TAG TTAGAG AGATTTGTTTAGAAT MS53_0221 243417 - 242419 - | putative phase-variable hemagglutinin TERM 497 242753 - 242721 - G 77 -9.3 -2.79803 | opp_overlap 242698, overlap 242720 242724 GAACGCTAGTTAAAG CAACTCCGTTTGTAT TTA ATACAAATGAAGCTG GAAATTTAGGGTCAA MS53_0222 245411 - 243447 - | putative phase-variable hemagglutinin TERM 498 244190 - 244216 + g 95 -11 -4.371 | TGTATCCATCTTGTG CTGCAACTGTAA AAT TTACAGTTGGAG TTTTAATATCATCAC TERM 499 244451 - 244468 + g 80 -5.6 -5.13343 | GTGTACGATCAGCGT CAGCTT TATAGT AAGCTG TTTTATTTTCGGTTG TERM 500 244625 - 244645 + g 95 -11.9 -3.35813 | overlap 244619 244625 244627 244628 244631 244632 CAAGTCTAACTGTAG CTGCAGTTG ATT CAGCTGCAG TTGATTCAGCTGCAG TERM 501 244625 - 244660 + g 100 -13.4 -3.10677 | overlap 244619 244625 244627 244628 244631 244632 244654 CAAGTCTAACTGTAG CTGCAGTTGATTCAGC TGCA GTTGATTCAGCTGCAG TTGAATCACTTGATT TERM 502 244627 - 244673 + g 100 -14.6 -3.68569 | overlap 244619 244625 244625 244628 244631 244632 244654 AGTCTAACTGTAGCT GCAGTTGATTCAGCTGCAGTTG ATT CAGCTGCAGTTGAATCACTTGA TTCTTCAGTAGCTGC TERM 503 244628 - 244672 + g 100 -18.1 -2.8082 | overlap 244619 244625 244625 244627 244631 244632 244654 GTCTAACTGTAGCTG CAGTTGATTCAGCTGCAGTTG ATT CAGCTGCAGTTGAATCACTTG ATTCTTCAGTAGCTG TERM 504 244631 - 244669 + g 100 -16.2 -3.54902 | overlap 244625 244625 244628 244627 244632 244654 TAACTGTAGCTGCAG TTGATTCAGCTGCAGTTG ATT CAGCTGCAGTTGAATCAC TTGATTCTTCAGTAG TERM 505 244632 - 244668 + g 100 -19.7 -2.72459 | overlap 244625 244625 244631 244628 244627 244654 AACTGTAGCTGCAGT TGATTCAGCTGCAGTTG ATT CAGCTGCAGTTGAATCA CTTGATTCTTCAGTA MS53_0223 245876 - 245412 - | putative phase-variable hemagglutinin TERM 506 245630 - 245656 + g 95 -11 -4.371 | TGTAGCCTTCTTTTG CTGCAACTGTAA ATG TTACAGTTGGAG TTTTAATATCATCAC MS53_0224 246840 - 245956 - | putative phase-variable hemagglutinin TERM 507 246579 - 246605 + g 73 -5.2 -4.73682 | overlap 246580 TGTAACCGTCTCTGG CTTCTACGGTAA AAG TTACTGTAGGAA TTTTATGTTGTGCAC TERM 508 246580 - 246604 + g 75 -8.7 -3.43486 | overlap 246579 GTAACCGTCTCTGGC TTCTACGGTAA AAG TTACTGTAGGA ATTTTATGTTGTGCA MS53_0225 247860 - 246877 - | putative phase-variable hemagglutinin TERM 509 247678 - 247690 + g 72 -4.9 -4.84529 | GCTAACTTGAGGATT TGTTA GAG TAACA TTTTTAAATTTATCA MS53_0226 249011 - 247911 - | putative phase-variable hemagglutinin TERM 510 249041 - 249055 + r 79 -5.8 -5.01823 | opp_overlap 249032 ATAGAATTTAAATTT TAAAAG ATA CTTTTA TTTTATTATTATTCT MS53_0227 249740 - 249033 - | putative phase-variable hemagglutinin TERM 511 249625 - 249611 - G 72 -7.2 -4.07133 | opp_overlap 249610 GATTTTCATAAAGAA CTCTAA TAG TTAGAG AGATTTGTTTAGGAT MS53_0228 249963 - 249721 - | putative phase-variable hemagglutinin TERM 512 249757 - 249769 + g 72 -4.9 -4.84529 | GCTAACTTGAGAATT TGTTA GAG TAACA TTTTTAAATTTATCA MS53_0229 251921 - 249993 - | putative phase-variable hemagglutinin TERM 513 251189 - 251209 + g 95 -11.9 -3.35813 | overlap 251183 251189 251191 251192 251195 251196 CAAGTCTAACTGTAG CTGCAGTTG ATT CAGCTGCAG TTGATTCAGCTGCAG TERM 514 251189 - 251224 + g 100 -13.4 -3.10677 | overlap 251183 251189 251191 251192 251195 251196 251218 CAAGTCTAACTGTAG CTGCAGTTGATTCAGC TGCA GTTGATTCAGCTGCAG TTGAATCACTTGATT TERM 515 251191 - 251237 + g 100 -14.6 -3.68569 | overlap 251183 251189 251189 251192 251195 251196 251218 AGTCTAACTGTAGCT GCAGTTGATTCAGCTGCAGTTG ATT CAGCTGCAGTTGAATCACTTGA TTCTTCAGTAGCTGC TERM 516 251192 - 251236 + g 100 -18.1 -2.8082 | overlap 251183 251189 251189 251191 251195 251196 251218 GTCTAACTGTAGCTG CAGTTGATTCAGCTGCAGTTG ATT CAGCTGCAGTTGAATCACTTG ATTCTTCAGTAGCTG TERM 517 251195 - 251233 + g 100 -16.2 -3.54902 | overlap 251189 251189 251192 251191 251196 251218 TAACTGTAGCTGCAG TTGATTCAGCTGCAGTTG ATT CAGCTGCAGTTGAATCAC TTGATTCTTCAGTAG TERM 518 251196 - 251232 + g 100 -19.7 -2.72459 | overlap 251189 251189 251195 251192 251191 251218 AACTGTAGCTGCAGT TGATTCAGCTGCAGTTG ATT CAGCTGCAGTTGAATCA CTTGATTCTTCAGTA MS53_0230 252456 - 251977 - | putative phase-variable hemagglutinin MS53_0231 252896 - 252510 - | putative phase-variable hemagglutinin TERM 519 252847 - 252815 - G 77 -9.3 -2.79803 | overlap 252814 252818 GAACGCTAGTTAAAG CAACTCCGTTTGTAT TTA ATACAAATGAAGCTG GAAATTTAGGGTCAA MS53_0232 254349 - 252877 - | putative phase-variable hemagglutinin TERM 520 254050 - 254072 + g 70 -7.8 -3.41878 | opp_overlap 254053, overlap 254047 254046 254047 254053 TAGAGAATCTTTTAA CGATGTTAGG TTT TCTAACATTG TTGTAGCTTGAGCAG TERM 521 254127 - 254141 + g 73 -8.6 -3.01791 | overlap 254129 CTTGTCTTTGTAGTT CAGCTT TAA AAGCTG TATTAACAAGAGCGT MS53_0233 255948 - 254497 - | putative phase-variable hemagglutinin MS53_0234 256500 - 255994 - | putative phase-variable hemagglutinin MS53_0235 257597 - 256530 - | putative phase-variable hemagglutinin MS53_0236 258976 - 257681 - | putative phase-variable hemagglutinin MS53_0237 261046 - 259094 - | putative phase-variable hemagglutinin TERM 522 260654 - 260676 + g 70 -7.8 -3.43564 | opp_overlap 260657, overlap 260650 260651 260657 TAGAGAATCTTTTAA CGATGTTAGG TTT TCTAACATTG TTGTAGCTTCAGTTG MS53_0238 261571 - 261101 - | putative phase-variable hemagglutinin MS53_0239 262651 - 261641 - | putative phase-variable hemagglutinin MS53_0240 263619 - 262963 - | putative phase-variable hemagglutinin MS53_0241 265562 - 263646 - | putative phase-variable hemagglutinin TERM 523 264836 - 264856 + g 95 -11.9 -3.11732 | overlap 264842 264843 CATTTGCAACTCTAA CTGTAGCTG ATT CAGCTGCAG TTGAATCACTTTGAG MS53_0242 266219 - 265608 - | putative phase-variable hemagglutinin TERM 524 266111 - 266128 + g 80 -5.6 -5.13343 | GTGTACGAGTAGTAT CAGCTT TATAGT AAGCTG TTTTATTTTCGGTTG MS53_0243 267573 - 266899 - | putative phase-variable hemagglutinin TERM 525 267260 - 267246 - G 72 -7.2 -4.07133 | opp_overlap 267245 GATTTTCATAAAGAA CTCTAA TAG TTAGAG AGATTTGTTTAGGAT MS53_0244 268779 - 267625 - | putative phase-variable hemagglutinin TERM 526 268371 - 268397 + g 100 -13.2 -4.09739 | TGTATCCATCTTGTG CTTCAACTGTAA ATG TTACAGTTGGAG TTTTAACAGCATTAG MS53_0245 270146 - 269073 - | putative phase-variable hemagglutinin TERM 527 269800 - 269786 - G 78 -7.2 -4.53705 | opp_overlap 269789 269790 AATCTTTATATAAAA CTCTTA TTG TAAGAG TTACAGTAGTTGTTG MS53_0246 270679 - 270176 - | putative phase-variable hemagglutinin MS53_0247 272115 - 270658 - | putative phase-variable hemagglutinin TERM 528 271218 - 271235 + g 80 -5.6 -5.13343 | GTGTACGATCAGCGT CAGCTT TATAGT AAGCTG TTTTATTTTCGGTTG MS53_0248 272810 - 272142 - | putative phase-variable hemagglutinin TERM 529 272317 - 272303 - G 72 -7.2 -4.07133 | opp_overlap 272302 GATTTTCATAAAGAA CTCTAA TAG TTAGAG AGATTTGTTTAGAAT TERM 530 272832 - 272850 + r 91 -11.8 -3.5944 | TGCTAGTTGAGTTTC TGGTGAAG TTG CTTCACCA TTTGCAACTCTAACT MS53_0249 275074 - 273122 - | putative phase-variable hemagglutinin TERM 531 274676 - 274698 + g 70 -7.8 -3.43564 | opp_overlap 274679, overlap 274672 274673 274679 TAGAGAATCTTTTAA CGATGTTAGG TTT TCTAACATTG TTGTAGCTTCAGTTG TERM 532 274753 - 274767 + g 73 -8.6 -3.02043 | overlap 274755 CTTGTCTTTGTAGTT CAGCTT TTA AAGCTG TATTAACAAGAGATT MS53_0250 275589 - 275101 - | putative phase-variable hemagglutinin MS53_0251 276653 - 275640 - | putative phase-variable hemagglutinin TERM 533 276530 - 276550 + g 78 -7.7 -4.30635 | CTAAAGTAAATTTGT CTTGATTTG CTT TAAATCAAG TTTCTAGTTTTTGTT MS53_0252 277813 - 276683 - | putative phase-variable hemagglutinin TERM 534 276887 - 276905 + g 77 -5.4 -5.1675 | TCCTTGGATTTGTTG TAAGAATA CTT TGTTCTTA TTTTTTACTAAATCG TERM 535 277359 - 277345 - G 76 -7.2 -4.2602 | opp_overlap 277344 GAGATGAATAAAGAA CTCTAA TAG TTAGAG AGATTTGTTTAGGAT MS53_0253 279144 - 278137 - | putative phase-variable hemagglutinin TERM 536 278982 - 279008 + g 88 -9.6 -4.09739 | TGTAGCCTTCTTTTG CTTTAACTGTAA ATT TTACAGTTGGAG TTTTAACAGCATTAG MS53_0254 280298 - 279264 - | putative phase-variable hemagglutinin TERM 537 279431 - 279457 + g 76 -8.9 -3.06183 | gap 1 ACTTATCGTTTGTAA GTGCAGTA-ACT GCAA AGTATACTGCAC TTGAATCACCATGCA TERM 538 279937 - 279923 - G 78 -7.2 -4.53705 | opp_overlap 279926 279927 AATCTTTATATAAAA CTCTTA TTG TAAGAG TTACAGTAGTTGTTG MS53_0255 281392 - 280328 - | putative phase-variable hemagglutinin MS53_0256 282000 - 281422 - | putative phase-variable hemagglutinin TERM 539 281777 - 281745 - G 77 -9.3 -2.79803 | overlap 281744 281748 GAACGCTAGTTAAAG CAACTCCGTTTGTAT TTA ATACAAATGAAGCTG GAAATTTAGGGTCAA MS53_0257 283349 - 282000 - | putative phase-variable hemagglutinin TERM 540 282164 - 282190 + g 95 -11 -4.09739 | TGTAGCCTTCTTTTG CTGCAACTGTAA ATG TTACAGTTGGAG TTTTAACAGCATTAG MS53_0258 283907 - 283404 - | putative phase-variable hemagglutinin MS53_0259 285007 - 283940 - | putative phase-variable hemagglutinin MS53_0260 285561 - 285040 - | putative phase-variable hemagglutinin TERM 541 285395 - 285417 + g 70 -8.5 -2.68806 | opp_overlap 285377 285373 285394, overlap 285373 ACATAGTTTATAACT GTGCTAAGA AATTC TCTTGGCAC TCGATTATTATCGAC MS53_0261 286119 - 285637 - | putative phase-variable hemagglutinin TERM 542 285741 - 285767 + g 100 -13.2 -4.09739 | TGTATCCATCTTGTG CTTCAACTGTAA ATG TTACAGTTGGAG TTTTAACAGCATTAG MS53_0262 288416 - 286431 - | putative phase-variable hemagglutinin TERM 543 287948 - 287960 + g 70 -7.7 -3.45031 | CATCGTAGTATTTTT GTGGA TAA TCCAC TTGCATTTTTAGACC MS53_0263 288994 - 288443 - | putative phase-variable hemagglutinin TERM 544 288618 - 288604 - G 76 -7.2 -4.2602 | opp_overlap 288603 GAGATGAATAAAGAA CTCTAA TAG TTAGAG AGATTTGTTTAGAAT MS53_0264 290186 - 289494 - | putative phase-variable hemagglutinin TERM 545 289837 - 289823 - G 78 -7.2 -4.53705 | AATCTTTATATAAAA CTCTTA TTG TAAGAG TTACAGTAGCTGCTG MS53_0265 290596 - 290213 - | putative phase-variable hemagglutinin MS53_0266 290807 - 290577 - | putative phase-variable hemagglutinin MS53_0267 291219 - 290812 - | putative phase-variable hemagglutinin TERM 546 291810 - 291800 - H 74 -2.6 -5.69068 | CAAAAACACAAAAAA TAAA TTA TTTA AGAATGTTTTATTTT TERM 547 292209 - 292151 - g 93 -3.3 -6.20267 | gap 1, opp_overlap 292156 292174, overlap 292157 TGAAAAATAAAAAAA TTAAATTGCTATTAGCAGCTAGTGCAGT GGCC ATTGCTCCTGCTG-TTATAGCAATTTCA TGTGGTGATCAAACT TERM 548 293680 - 293654 - g 95 -11 -4.09739 | CTAATGCTGTTAAAA CTCCAACTGTAA CAT TTACAGTTGCAG CAAAAGAAGGCTACA vlhA 292135 - 293844 + | phase-variable hemagglutinin MS53_0269 293844 - 294455 + | putative phase-variable hemagglutinin TERM 549 294508 - 294537 + F 100 -12.4 -4.54821 | opp_overlap 294515, overlap 294515 CCCCAAAATGTTTTA CAAAAAAGCCAA CTATTT TTGGCTTTTTTG TTTTATAATTACGGT TERM 550 294515 - 294530 + F 90 -4.7 -5.86976 | opp_overlap 294515, overlap 294508 ATGTTTTACAAAAAA GCCAA CTATTT TTGGC TTTTTTGTTTTATAA TERM 551 294530 - 294515 - f 77 -4.7 -5.24531 | opp_overlap 294515 294508 ATGTTTTACAAAAAA GCCAA CTATTT TTGGC TTTTTTGTTTTATAA TERM 552 294966 - 294989 + G 78 -9.6 -3.01918 | opp_overlap 294935, overlap 294963 294968 TTTTAATTTCAGCGC CAGCAGGAAG CGAT CTTCCTACTG TGGTTTATAACGTAA gapA 294593 - 295597 + | glyceraldehyde 3-phosphate dehydrogenase TERM 553 295724 - 295746 + F 72 -6.4 -4.35926 | opp_overlap 295710 295741 ACAAGTTTTTTCACA CTTGCAAT CTTTACA ATTGCAAG TTTTACATTTACAAT TERM 554 296016 - 295984 - g 70 -8.7 -2.60988 | opp_overlap 295977 295993 296008, overlap 295981 295993 AATCGAATGAATTCA TATTTTAAAGGAAAT ATA AATTCCTTTAAAACA TATGCCATGTTTGAA TERM 555 296662 - 296616 - g 81 -8.4 -4.14739 | opp_overlap 296616 296618 296653, overlap 296618 296633 TTATGGAGTTCAAAA CATTTTCCAAAGAAAAATAATT GAA AATTATGATTCTTTAGAAAATA TAATTTCTAATTTTT TERM 556 296660 - 296618 - g 76 -8.8 -3.67188 | opp_overlap 296616 296618 296653, overlap 296616 296633 ATGGAGTTCAAAACA TTTTCCAAAGAAAAATAATT GAA AATTATGATTCTTTAGAAAA TATAATTTCTAATTT TERM 557 296645 - 296633 - g 72 -3.5 -5.27335 | opp_overlap 296618 296616, overlap 296618 296616 TTTTCCAAAGAAAAA TAATT GAA AATTA TGATTCTTTAGAAAA TERM 558 296768 - 296740 - g 70 -5.6 -4.41609 | gap 1, opp_overlap 296748 296753, overlap 296748 GACTATAAATACAAA GATTT-AAATCTA GATT TAGATTTTAAATC TAAAATAATATTTCC uvrC 295849 - 297597 + | excinuclease ABC subunit C pdhA 297651 - 298775 + | pyruvate dehydrogenase E1 component, alpha subunit TERM 559 299645 - 299622 - g 70 -6.8 -3.94002 | opp_overlap 299624 CAGCAGTTAACGAAA GAGCTTTTGA ATAC TTAAAAGCTC CTCTAGCAAGACTAA pdhB 298772 - 299767 + | pyruvate dehydrogenase E1 component, beta subunit pdhC 299788 - 300672 + | dihydrolipoamide acetyltransferase TERM 560 301968 - 301950 - g 74 -8.2 -3.65046 | CCGCTATTGGAAGAA GCGCTAAT GCA ATTAACGC TGCTGAAGTAGGAGT TERM 561 302160 - 302147 - g 71 -2.4 -5.42975 | GGAGATAAACAAAAA GGAT CATATC ATCC AAAAGCTGTGCCTGG pdhD 300674 - 302542 + | dihydrolipoamide dehydrogenase TERM 562 302554 - 302566 + F 76 -6.3 -4.67556 | opp_overlap 302540 302554 ATAATTTCAAAAAAA TTAGC GTC GCTAA TTTTTCCCATATTGT TERM 563 302566 - 302554 - f 100 -6.3 -5.48303 | opp_overlap 302554, overlap 302540 ATAATTTCAAAAAAA TTAGC GTC GCTAA TTTTTCCCATATTGT TERM 564 302637 - 302615 - f 71 -4.8 -4.73635 | opp_overlap 302617, overlap 302616 302617 TACAATTTAATAAAA TTGCCGATTT TAA AAATCGGCTT TTTATTTTTTATTAG TERM 565 302636 - 302616 - f 75 -8.3 -3.43097 | opp_overlap 302617, overlap 302615 302617 ACAATTTAATAAAAT TGCCGATTT TAA AAATCGGCT TTTTATTTTTTATTA TERM 566 302635 - 302617 - f 87 -11.8 -2.64773 | opp_overlap 302617, overlap 302616 302615 CAATTTAATAAAATT GCCGATTT TAA AAATCGGC TTTTTATTTTTTATT TERM 567 302617 - 302635 + F 100 -11.8 -5.84011 | opp_overlap 302617 302616 302615 CAATTTAATAAAATT GCCGATTT TAA AAATCGGC TTTTTATTTTTTATT TERM 568 303733 - 303748 + F 100 -7.6 -5.56573 | opp_overlap 303733 ATGATGATTTATAAA TGCTCT CTTG AGAGCA TTTTTCTTTCTTTCT TERM 569 303748 - 303733 - f 74 -7.6 -3.93963 | opp_overlap 303733 ATGATGATTTATAAA TGCTCT CTTG AGAGCA TTTTTCTTTCTTTCT TERM 570 303818 - 303787 - f 100 -9.7 -5.7946 | TTTTTAATAAAAAAA CTCCCAAAAAAAT TTTAAT ATTTTTTTGAGAG TGGTAACTTGGAAGT TERM 571 303846 - 303863 + F 100 -7 -5.95449 | AGTTACAAGTGGGAA GTTGGC AATAAG GCCAAC TTTTTTATTTTATTT TERM 572 304771 - 304802 + F 85 -10.6 -3.22774 | opp_overlap 304775 304779 304783, overlap 304771 304771 304771 TTTGGATTAGCCGAA TTAATTAATTAATT AATT AATTAATTAATTAA TTAATACTAACTATC TERM 573 304771 - 304798 + F 77 -8.8 -3.41693 | opp_overlap 304775 304779 304783, overlap 304771 304771 304771 TTTGGATTAGCCGAA TTAATTAATTAA TTAA TTAATTAATTAA TTAATTAATACTAAC TERM 574 304806 - 304775 - f 86 -10.6 -3.36289 | opp_overlap 304771 304771 304771 304771, overlap 304779 304783 GATTAGCCGAATTAA TTAATTAATTAATT AATT AATTAATTAATTAA TACTAACTATCCAAA TERM 575 304806 - 304779 - f 77 -8.8 -3.45634 | opp_overlap 304771 304771 304771 304771, overlap 304775 304783 AGCCGAATTAATTAA TTAATTAATTAA TTAA TTAATTAATTAA TACTAACTATCCAAA TERM 576 305395 - 305374 - f 100 -8.9 -5.17507 | AAAACTCAAGAAAAA TTTCAAATG AATT CATTTGAAA TTGCAATGTTTGTAA TERM 577 305703 - 305673 - g 80 -5.6 -5.00616 | opp_overlap 305680, overlap 305680 TTGCCCTTGAAAAAA TTAAAAATTACGAT TCA ATCGTGATTTTTCA TCACATTCAGCCAGA TERM 578 305696 - 305680 - g 72 -3.7 -5.25735 | opp_overlap 305680, overlap 305673 TGAAAAAATTAAAAA TTACGAT TCA ATCGTGA TTTTTCATCACATTC TERM 579 305680 - 305696 + G 75 -5.9 -4.74801 | opp_overlap 305680 305673 TGAAAAAATTAAAAA TTACGAT TCA ATCGTGA TTTTTCATCACATTC MS53_0279 305657 - 306586 + | putative MGPA-like protein TERM 580 306588 - 306616 + F 100 -10.7 -5.66989 | opp_overlap 306590 306597 306600 306606, overlap 306582 306592 306593 306597 AAAAAGAAATTTAGA TATTTTAAATATT AAA AATATTTAAAATA TTTTTTTAATATTTA TERM 581 306614 - 306590 - f 74 -8.9 -3.0122 | opp_overlap 306582 306588 306592 306593 306597, overlap 306597 306600 306606 AAAGAAATTTAGATA TTTTAAATATT AAA AATATTTAAAA TATTTTTTTAATATT TERM 582 306765 - 306744 - f 85 -4.5 -5.88476 | overlap 306746 AAAAGAAAGAAAAAA GAGCTATTT GTAA AAATAGCTT CCCATATTGTAAAGT TERM 583 306763 - 306746 - f 76 -7.1 -4.51345 | overlap 306744 AAGAAAGAAAAAAGA GCTATTT GTAA AAATAGC TTCCCATATTGTAAA TERM 584 306804 - 306836 + F 75 -3 -5.57396 | gap 2, opp_overlap 306810 306811, overlap 306811 TCACTTACAATTTAA TAAAATTGCCGATTTT TAA AAAGTCGGC--TTTTA TTTTTTATTAGTTAT TERM 585 306831 - 306811 - f 70 -8.3 -2.64773 | opp_overlap 306811 306804, overlap 306810 CAATTTAATAAAATT GCCGATTTT TAA AAAGTCGGC TTTTATTTTTTATTA TERM 586 306811 - 306831 + F 100 -10.5 -5.55001 | opp_overlap 306810 306811, overlap 306804 CAATTTAATAAAATT GCCGATTTT TAA AAAGTCGGC TTTTATTTTTTATTA TERM 587 307894 - 307909 + F 100 -7.6 -5.59962 | opp_overlap 307894 ATGGTTATATATGAA TGCTCT CTTG AGAGCA TTTTTCTTTCTTTTG TERM 588 307979 - 307948 - f 100 -9.7 -6.09888 | TTTTAATAAAAAAAA CTCCCAAAAAAAT TTTAAT ATTTTTTTGAGAG TGGTAACTTGGAAGT TERM 589 308009 - 308027 + F 91 -6.1 -5.7946 | TTACAATGTGGGAGA GCTATTT GGAAA AAATAGC TTTTTTTATTAAAAG licA 309020 - 309763 + | PTS system, lichenan-specific IIA component TERM 590 310014 - 310053 + F 83 -4 -5.8187 | gap 1, opp_overlap 310031, overlap 310017 310019 TTATTTTGAGACTTT TTGA-ATTTCTTAATATAT TTC ATATATTAAGAAATCTTTA TTTTTTTCTTAAATA TERM 591 310017 - 310049 + F 100 -9.5 -5.33131 | opp_overlap 310031, overlap 310014 310019 TTTTGAGACTTTTTG AATTTCTTAATATAT TTC ATATATTAAGAAATC TTTATTTTTTTCTTA TERM 592 310019 - 310047 + F 100 -12.1 -4.23106 | opp_overlap 310031, overlap 310017 310014 TTGAGACTTTTTGAA TTTCTTAATATAT TTC ATATATTAAGAAA TCTTTATTTTTTTCT TERM 593 311254 - 311229 - g 89 -7.7 -5.17353 | AGACTCATTAAAAAA GCTGAAAAATT ACTC AATTTATCAGC TATAAAATCAGAAAT TERM 594 311622 - 311608 - g 78 -5.8 -4.99043 | TGCCTACAAATAAAA TAATTG ATG CAATTA AAAATCAAAAATTAT MS53_0283 310107 - 311768 + | putative transposase,undefined TERM 595 311821 - 311787 - T 100 -8.7 -5.31275 | opp_overlap 311787 TTGTATTATAAAAAA CTACGAATAGCTCTA TATTG TAGGGTTATTCGTAG TTTTAAGTTTTAAAA TERM 596 311787 - 311821 + T 100 -13.8 -4.4267 | opp_overlap 311787 TTGTATTATAAAAAA CTACGAATAGCTCTAT ATT GTAGGGTTATTCGTAG TTTTAAGTTTTAAAA MS53_0284 313292 - 311934 - | hypothetical protein TERM 597 313346 - 313319 - R 100 -11.6 -5.05505 | opp_overlap 313319 ATTATAAATTAAAAA CTAATAACTATT TTAA AATAGTTATTAG TTTTTTGAATTTTAT TERM 598 313319 - 313346 + r 100 -11.6 -5.28315 | opp_overlap 313319 ATTATAAATTAAAAA CTAATAACTATT TTAA AATAGTTATTAG TTTTTTGAATTTTAT MS53_0285 315700 - 313361 - | hypothetical protein TERM 599 314551 - 314569 + g 78 -7.6 -4.44046 | opp_overlap 314555, overlap 314555 AACCAATACTCATTG CAAATTTA TGA TAAATTTG TTTATTTGAAGTAAA TERM 600 315888 - 315867 - H 72 -4.5 -5.04265 | opp_overlap 315868, overlap 315868 AAAAAATATGAAAAA CTTATTTGC AAAC GCAAATAAT TTTATTTTTTTGAAA TERM 601 315887 - 315868 - H 74 -8 -3.58899 | opp_overlap 315868, overlap 315867 AAAAATATGAAAAAC TTATTTGC AAAC GCAAATAA TTTTATTTTTTTGAA TERM 602 315868 - 315887 + H 100 -8 -5.55855 | opp_overlap 315868 315867 AAAAATATGAAAAAC TTATTTGC AAAC GCAAATAA TTTTATTTTTTTGAA TERM 603 316064 - 316046 - H 74 -2.5 -5.67063 | TTTAGCATAAAAAAA CACAAAA GGAAA TTTTATG CAAATTAATACTGAC TERM 604 316165 - 316153 - H 71 -4.9 -4.88918 | TTATTTTAAAGAAAA TTTAC AAA GTAAA CTAAGAAGTCAATTT TERM 605 316640 - 316618 - g 78 -10 -2.61695 | opp_overlap 316622 316623, overlap 316615 316623 GTGATTTTGAAATAG TAAAACTAGG AGC CCTAGCTTTA GAGTCTACAAACCTT TERM 606 316635 - 316623 - g 80 -7.7 -4.49756 | opp_overlap 316622 316623, overlap 316615 316618 TTTGAAATAGTAAAA CTAGG AGC CCTAG CTTTAGAGTCTACAA MS53_0287 316527 - 316982 + | hypothetical protein TERM 607 317260 - 317223 - f 79 -6.5 -4.79955 | opp_overlap 317223 317236 317250 317254 ATATTGATAATAAAA TCTTCTTGAAAATTTTC AAAC GAAACTTTTCTAAAAGA AATTTTAATTATGTA TERM 608 318541 - 318560 + F 88 -5.2 -5.48623 | opp_overlap 318553, overlap 318536 318553 CATTATTTCGTTTTT TATTTTTA AAAT TAAAAATA TTTTTATTTATATTT TERM 609 319536 - 319519 - f 78 -7.1 -4.56914 | overlap 319527 TTAGTGAAATTAAAA GAAGATA TCAA TATCTTC CCATATTGTAAAGTG TERM 610 319574 - 319604 + F 80 -4.3 -5.57396 | gap 2, opp_overlap 319579 319580 319581, overlap 319581 CCACTTACAATTTAA TAAAATTGCCGATTT TAA AAATCGGC--TTTTA TTTTTTATTAGTTAT TERM 611 319601 - 319579 - f 71 -4.8 -4.73635 | opp_overlap 319574 319581, overlap 319580 319581 TACAATTTAATAAAA TTGCCGATTT TAA AAATCGGCTT TTATTTTTTATTAGT TERM 612 319600 - 319580 - f 75 -8.3 -3.43097 | opp_overlap 319574 319581, overlap 319579 319581 ACAATTTAATAAAAT TGCCGATTT TAA AAATCGGCT TTTATTTTTTATTAG TERM 613 319581 - 319599 + F 100 -11.8 -5.55001 | opp_overlap 319580 319579 319581, overlap 319574 CAATTTAATAAAATT GCCGATTT TAA AAATCGGC TTTTATTTTTTATTA TERM 614 319599 - 319581 - f 87 -11.8 -2.64773 | opp_overlap 319581 319574, overlap 319580 319579 CAATTTAATAAAATT GCCGATTT TAA AAATCGGC TTTTATTTTTTATTA TERM 615 320677 - 320662 - f 70 -7.6 -3.51976 | opp_overlap 320662, overlap 320658 AAGGTTTCAAATGAA TGCTCT CTTG AGAGCA TTTTTCTTTCTTTTG TERM 616 320662 - 320677 + F 100 -7.6 -5.59962 | opp_overlap 320662 320658 AAGGTTTCAAATGAA TGCTCT CTTG AGAGCA TTTTTCTTTCTTTTG TERM 617 320747 - 320715 - f 100 -7.2 -5.7946 | TTTTTAATAAAAAAA CTCCCAAAAAAATT TTAAT ATTTTTTTTGAGAG TGGTAACTTGGAAGT TERM 618 320788 - 320777 - f 70 -7.2 -3.58533 | opp_overlap 320777 TTACAATGTGGGAAA CGGC TTAT GCCG TTTTTTATATAAAAT TERM 619 320777 - 320788 + F 95 -7.2 -5.37043 | opp_overlap 320777 TTACAATGTGGGAAA CGGC TTAT GCCG TTTTTTATATAAAAT TERM 620 320830 - 320846 + F 77 -5.3 -4.94109 | TAAATATTTTCACTT TTATTTT TTA AAAATAA TTATTTTTTGTTTTA TERM 621 320884 - 320874 - f 70 -4 -5.09521 | opp_overlap 320874, overlap 320848 320847 TTAATAAACTAAAAA TAGT AAA ACTA TATGATCGCATAAAT MS53_0291 321056 - 321433 + | hypothetical protein MS53_0292 321706 - 321942 + | hypothetical protein TERM 622 322667 - 322612 - g 70 -5.2 -4.44525 | opp_overlap 322627 322657, overlap 322627 AAAAAAATATATAAA TTTATGAATAAGGAATCTAAAAAAAT AATT ATTTTTTTAGATTTATTATTAAAAAA TAATTCTTTAATAAT TERM 623 322627 - 322652 + G 90 -9.3 -4.44667 | opp_overlap 322612 322627 TTTATGAATAAGGAA TCTAAAAAAAT AATT ATTTTTTTAGA TTTATTATTAAAAAA TERM 624 322652 - 322627 - g 84 -9.3 -3.56142 | opp_overlap 322627, overlap 322612 TTTATGAATAAGGAA TCTAAAAAAAT AATT ATTTTTTTAGA TTTATTATTAAAAAA TERM 625 323066 - 323055 - g 70 -3 -5.33405 | TTCATTAAATAAAAA TGAT ATAT ATCA AATATTTCCTTCTAC MS53_0293 321946 - 323577 + | hypothetical protein TERM 626 324893 - 324865 - g 100 -9.1 -5.68039 | AAATTCAGAAAAAAA TATAATCGAAAAA TAT TTTTTCGATAATA CAAAAGAATTAAAAA MS53_0294 323612 - 325492 + | hypothetical protein TERM 627 325527 - 325490 - T 95 -8.2 -4.9792 | gap 1, opp_overlap 325470 325492 TATGTTACACAAAAA TAGTTAATTCTATAAAT ATATA ATTT-TAGAATTAACTA TTCCCACATTGTAAC TERM 628 325556 - 325588 + T 100 -7.2 -5.7946 | ACTTCCAAGTTACCA CTCTCAAAAAAAAT ATTAA AATTTTTTTGGGAG TTTTTTTATTAAAAA TERM 629 325641 - 325626 - T 100 -7.6 -5.59962 | opp_overlap 325622 325626 CAAAAGAAAGAAAAA TGCTCT CAAG AGAGCA TTCATTTGAAACCTT TERM 630 325626 - 325641 + T 70 -7.6 -3.51976 | opp_overlap 325626, overlap 325622 CAAAAGAAAGAAAAA TGCTCT CAAG AGAGCA TTCATTTGAAACCTT TERM 631 325742 - 325762 + T 100 -10.5 -5.35222 | opp_overlap 325741 CTCTTAGAAAAACCT GAGTTTCCA AGT TGGAAGCTC TTTTTTATACCTTTT TERM 632 325784 - 325810 + T 76 -8.2 -3.82448 | overlap 325784 325785 325787 ATACCTTTTACCTTA TTACTTATATAC ATA GTATATAAGTAC ATTTTTTAATTATTT TERM 633 325784 - 325811 + T 93 -6.6 -5.43514 | gap 1, overlap 325784 325785 325787 ATACCTTTTACCTTA T-TACTTATATAC ATA GTATATAAGTACA TTTTTTAATTATTTT TERM 634 325785 - 325809 + T 87 -11.7 -2.87029 | overlap 325784 325784 325787 TACCTTTTACCTTAT TACTTATATAC ATA GTATATAAGTA CATTTTTTAATTATT TERM 635 325787 - 325807 + T 79 -9.9 -2.95904 | overlap 325785 325784 325784 CCTTTTACCTTATTA CTTATATAC ATA GTATATAAG TACATTTTTTAATTA TERM 636 327570 - 327542 - T 93 -7.5 -5.15117 | opp_overlap 327542 TAAAAGTGCAAAAAA CGAATACGCCT TATTTAT AGGTGTATTCG TTTTTTTTCATTACA TERM 637 327542 - 327570 + T 100 -9.7 -5.95166 | opp_overlap 327542 TAAAAGTGCAAAAAA CGAATACGCCT TATTTAT AGGTGTATTCG TTTTTTTTCATTACA TERM 638 327621 - 327611 - T 78 -2.6 -5.9873 | opp_overlap 327611, overlap 327616 327617 GCAGGATAAAAAAAA TAAA CCC TTTA TTATTTTGATAATAA pfk 328670 - 327690 - | 6-phosphofructokinase folD 329503 - 328667 - | methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase TERM 639 328726 - 328740 + g 83 -10 -3.31263 | opp_overlap 328717 328716 TTAAAGGCCCTACTC CTCCAG GAA CTGGAG TTATAGCGCTGGCCT valS 331989 - 329491 - | valyl-tRNA synthetase TERM 640 329797 - 329807 + g 84 -4 -5.79595 | overlap 329804 AAGAATATTTAGATT TTTC TTT GAAA TTTTTTCTTTTAAAC TERM 641 330226 - 330253 + g 74 -8.7 -3.31501 | opp_overlap 330233 330236 330238, overlap 330223 330229 330252 TTTGCTTTGCTCGCT TAATTTAGAAG ATTTAG CTTCTAAATTA TTATCAGGCATTGAT TERM 642 330703 - 330716 + g 78 -8.1 -4.06562 | opp_overlap 330703 GCTATCTTGAACTCA GCCCT GCCC AGGGC TTTCTGCTTGAACTT TERM 643 331285 - 331261 - G 73 -8.9 -2.567 | opp_overlap 331256 331267, overlap 331260 331267 AGTAATAGGATGAAT TAAAAATTTAA TCT TTAAATTTTTA TAACGCTTATCTTTT MS53_0299 332304 - 333197 + | putative endoglucanase MS53_0300 333221 - 333640 + | putative neutrophil activating protein NapA TERM 644 334481 - 334471 - g 74 -4 -5.37171 | AATATTAAAGAAAAA TTTC AAA GAAA AAATTTAACTAGTGA TERM 645 334674 - 334684 + G 74 -8.2 -3.66732 | overlap 334682 AACTAGCATTTATAT CGCC AAT GGCG TTATTCCAATGCTTC TERM 646 335234 - 335258 + G 84 -10.3 -3.03124 | opp_overlap 335237 335241 335253, overlap 335237 ATTTAACGGCTTTAG GAATTAATATT AAA AATATTAATTC TATTACAAGCTCAGC vacB 333727 - 335937 + | VACB-like ribonuclease II MS53_0302 335927 - 336703 + | putative DNA methylase TERM 647 337147 - 337133 - g 100 -7.2 -5.61596 | AGCTCTAGAAAAAAA TGGTAA GTA TTACCA TCCAGTATCACATGA TERM 648 337277 - 337247 - g 70 -5.7 -4.38154 | ATATTTTGCAGAAAA TTCTAATTTTTTA TTTCC TAAAAAAATAGAA AATGAAATTCTAAAT TERM 649 337898 - 337884 - g 91 -7.2 -5.20633 | overlap 337878 337887 AAAAATACAGAAAAA GATTTC TTA GAAATC GAAGAAAAAATTTTA TERM 650 337935 - 337909 - g 100 -11.2 -5.52096 | opp_overlap 337917 AAATCGAAGAAAAAA TTTTAAAATCAA AAG TTGATTTTAAAA AGCATATGGATTTAT metG 336705 - 338261 + | methionyl-tRNA synthetase MS53_0304 338257 - 338559 + | hypothetical protein TERM 651 338550 - 338592 + T 100 -8 -5.63374 | opp_overlap 338557 338563, overlap 338552 TTTTGAAGTAACAAC CGCGAAATAAAAATGTCAAG ATG TTTGACATTTTTATTTAGTA TTTTTTTAGTATTGG TERM 652 338552 - 338590 + T 100 -12.8 -4.44318 | opp_overlap 338557 338563, overlap 338550 TTGAAGTAACAACCG CGAAATAAAAATGTCAAG ATG TTTGACATTTTTATTTAG TATTTTTTTAGTATT TERM 653 338585 - 338557 - T 87 -10.6 -3.64049 | opp_overlap 338552 338550, overlap 338563 GTAACAACCGCGAAA TAAAAATGTCAA GATGT TTGACATTTTTA TTTAGTATTTTTTTA TERM 654 338579 - 338563 - T 85 -5.2 -5.27938 | opp_overlap 338552 338550, overlap 338557 ACCGCGAAATAAAAA TGTCAA GATGT TTGACA TTTTTATTTAGTATT glyA 339852 - 338587 - | serine hydroxymethyltransferase TERM 655 338674 - 338695 + g 77 -7.5 -4.258 | opp_overlap 338681 338691 TCTTGCAGCTTTAGA TTTAGAATT TAAA AATTCTAAA TTTCTTAGTGAATAA TERM 656 338831 - 338846 + g 72 -3.4 -5.24531 | overlap 338829 GGAATTGAATTTTTA TTAATA GTAA TATTAA TTTTTTCTAAGAAGT pheT 342014 - 339855 - | putative phenylalanyl-tRNA synthetase beta chain TERM 657 340144 - 340158 + g 71 -4.3 -4.88293 | opp_overlap 340144 340142 AAAAGACAATCAAGA TCCAA AAAGC TTGGA TTTATTTTTCCAATT ung 342693 - 342019 - | uracil-DNA glycosylase pheS 343638 - 342697 - | phenylalanyl-tRNA synthetase subunit alpha TERM 658 342834 - 342875 + g 70 -7.6 -3.50488 | gap 1, opp_overlap 342840 342843, overlap 342840 AGTTTTTCTTGTTTT TTAAAATATTAGGATGCAG CATTC CTGC-TCCTAGTATTTCAA TTCATCTGTTTTTAT upp 343796 - 344416 + | uracil phosphoribosyltransferase TERM 659 344856 - 344844 - g 72 -4.9 -4.87273 | opp_overlap 344834 344844, overlap 344834 AAGACTTCATAAAAA TGAAT TTT ATTCA TTTTTTTCTGCTGCC TERM 660 344844 - 344856 + G 83 -4.9 -5.67063 | opp_overlap 344834 344844, overlap 344834 AAGACTTCATAAAAA TGAAT TTT ATTCA TTTTTTTCTGCTGCC MS53_0310 344437 - 345186 + | hypothetical protein TERM 661 346292 - 346262 - g 75 -7.9 -4.0031 | gap 1, opp_overlap 346261 ATCTTTAGCAAATAA TTCTTTTGATGAAA ATAA TTTCA-CAAAAGAA GTTAAATTCAATTTA leuS 345195 - 347492 + | leucyl-tRNA synthetase TERM 662 348658 - 348648 - g 77 -5.4 -5.09173 | GAATATCTTAAAAAA CTTC CAT GAAG AAAAGTTTCAAAAGA TERM 663 348822 - 348797 - g 84 -5.6 -5.21236 | overlap 348785 AACTTATAATAAAAA CTATAAAAAC GAAGTT GTTTCTATAG ATGAAAATTATGAAA TERM 664 349356 - 349344 - g 89 -7.7 -5.02715 | ACATTAAATGAAAAA GTGCA AAT TGCAC AAAAACATTTAATTC lon 347532 - 350204 + | heat shock ATP-dependent protease TERM 665 351385 - 351395 + G 71 -4 -5.00895 | GATTTTAATTATAGT TTTG ACC CAAA TTTTTATATCGTGAA MS53_0313 350644 - 351417 + | hypothetical protein MS53_0315 351963 - 352307 + | hypothetical protein TERM 666 352648 - 352666 + F 76 -3.9 -5.60993 | ATTTCATTAAAAATT GTAAGTT AATAA AACTTGC TTTTTTTATGCAAAA MS53_0316 352722 - 354914 + | hypothetical protein TERM 667 354925 - 354950 + T 81 -7.7 -4.67123 | opp_overlap 354932, overlap 354932 GATAAAAATAAAACA AAAAAAAGCCA AAAT TGGCTTTTTTG TTTTGCTTATTTTGC TERM 668 354932 - 354943 + T 100 -5.8 -5.85244 | opp_overlap 354932, overlap 354925 ATAAAACAAAAAAAA GCCA AAAT TGGC TTTTTTGTTTTGCTT TERM 669 354943 - 354932 - T 100 -5.8 -6.37666 | opp_overlap 354932 354925 ATAAAACAAAAAAAA GCCA AAAT TGGC TTTTTTGTTTTGCTT gyrA 357567 - 354970 - | DNA gyrase subunit A TERM 670 355683 - 355707 + g 75 -7.3 -4.12942 | overlap 355684 TATCAGCTTCTTGAA TTTTATAAGCT CTT AGCTTATAAAC TTTTCCAAGGTTTGA TERM 671 355684 - 355706 + g 88 -10.8 -3.07283 | overlap 355683 ATCAGCTTCTTGAAT TTTATAAGCT CTT AGCTTATAAA CTTTTCCAAGGTTTG TERM 672 356239 - 356223 - G 75 -9.5 -2.71246 | opp_overlap 356223 356226, overlap 356220 356219 356226 ATTTAATTAAAGCTA CAACATC ATC GATGTTG TTAGTTGCTACTAAA TERM 673 356223 - 356239 + g 82 -9.5 -3.41693 | opp_overlap 356220 356219 356223 356226, overlap 356226 ATTTAATTAAAGCTA CAACATC ATC GATGTTG TTAGTTGCTACTAAA TERM 674 356465 - 356475 + g 80 -5.4 -5.22312 | TTTAATACAACTTCA GGAT TAA ATCC TTTTTTGATGTCAAT TERM 675 357355 - 357340 - G 72 -6.2 -4.36596 | overlap 357344 TGCATAATCAAGAAA TGAAGT TTCA ACTTCA TCATGAATTGCAACT rluB 358372 - 357677 - | ribosomal large subunit pseudouridine synthase B nadD 359469 - 358384 - | putative nicotinate-nucleotide adenylyltransferase dinP 360640 - 359471 - | DNA polymerase IV nifU 361097 - 360699 - | nitrogen fixation protein NifU TERM 676 361022 - 361038 + g 74 -2.3 -5.626 | opp_overlap 361037, overlap 361037 ATTTATCGGAGCAAG TGTTATT ATA AAAAACA TTTTTTTCTAAAATG TERM 677 361053 - 361037 - G 74 -3.8 -5.31275 | opp_overlap 361022 361037 TGTTATTATAAAAAA CATTTT TTTCT AAAATG TTTTTATCAAAATGC nifS 362280 - 361114 - | nitrogen fixation protein NifS TERM 678 361154 - 361173 + g 74 -2.2 -5.68489 | ACATTTTTTAGCTCT GATATTAA TTTA TCAATATC TTTTTTATTATTATA TERM 679 361542 - 361552 + g 78 -2.6 -5.86332 | opp_overlap 361542 AATTATTTTTAAAAT TAAA GTC TTTA TTTTTTTTAACTTCA TERM 680 362129 - 362118 - G 70 -5.8 -4.43477 | GTGAGTTAACTAAAA CTCC AATA GGAG TATCACTAGTTCGAG MS53_0323 362751 - 362281 - | hypothetical protein TERM 681 362683 - 362667 - G 74 -3.8 -5.24551 | opp_overlap 362667 CTAAATGAAGAAAAA TATTAG AGCAG CTAATA ATTTTTTTATGGTAC MS53_0324 363223 - 362753 - | hypothetical protein TERM 682 363172 - 363186 + g 77 -2.9 -5.59879 | opp_overlap 363170, overlap 363170 CTTGATATAGAATTT GAATT TTTTC AATTC TTTTTTGTCTTTGTG MS53_0325 364674 - 363232 - | hypothetical protein TERM 683 363750 - 363764 + g 82 -2.8 -6.11019 | AAAGAATCACATTTC CTACAA CTA TAGTAG TTTTTTTTCATTTTT TERM 684 364473 - 364487 + g 73 -8.6 -3.05384 | opp_overlap 364481 CCTCACTAGCATTAG CTGGAA TAT TTCCAG TTAGATGGAAAAAGC TERM 685 365088 - 365113 + G 80 -9.1 -3.6363 | opp_overlap 365095 AAAATGTTTATGTTT TTGATAACCAC TTTA GTGGATATCAA TTAGTTTATGCTGCT MS53_0326 364757 - 365608 + | hypothetical protein TERM 686 365645 - 365664 + T 73 -8.6 -3.16117 | opp_overlap 365639, overlap 365643 365644 TGCTACAATTCTACT TGAGGCGA GTTG TTGCCTCA TATTAGATTCACTGT TERM 687 365963 - 365994 + T 100 -11.9 -5.7946 | opp_overlap 365960 365983 ACTTCCAAGTTACCA CTCTCAAAAAAAT ATTAAA ATTTTTTTGAGAG TTTTTTTATTAAAAA TERM 688 366048 - 366033 - T 100 -7.6 -5.63012 | opp_overlap 366033 AAAAAGAAAGAAAAA TGCTCT CAAG AGAGCA TTCATATATAACCAT TERM 689 367137 - 367107 - T 80 -4.3 -5.57396 | gap 2, opp_overlap 367110 367111 367112, overlap 367112 ATAACTAATAAAAAA TAAAA--GCCGATTT TTA AAATCGGCAATTTTA TTATATTGTAAGTGG TERM 690 367110 - 367132 + T 74 -4.8 -4.92791 | opp_overlap 367107 367112, overlap 367111 367112 ACTAATAAAAAATAA AAGCCGATTT TTA AAATCGGCAA TTTTATTATATTGTA TERM 691 367111 - 367131 + T 77 -8.3 -3.54048 | opp_overlap 367107 367112, overlap 367110 367112 CTAATAAAAAATAAA AGCCGATTT TTA AAATCGGCA ATTTTATTATATTGT TERM 692 367112 - 367130 + T 87 -11.8 -2.70802 | opp_overlap 367112 367107, overlap 367111 367110 TAATAAAAAATAAAA GCCGATTT TTA AAATCGGC AATTTTATTATATTG TERM 693 367130 - 367112 - T 100 -11.8 -5.55001 | opp_overlap 367111 367110 367112, overlap 367107 TAATAAAAAATAAAA GCCGATTT TTA AAATCGGC AATTTTATTATATTG TERM 694 367177 - 367205 + T 100 -13.3 -5.87996 | opp_overlap 367181 CTTTACAATATGGGA CGAATACGCCT TATTTAT AGGCGTATTCG TTTTTTTCTTCATTG TERM 695 367336 - 367326 - T 71 -2.6 -5.60993 | opp_overlap 367311 367326 TTTTTTAGAAAAAAA TTTT AAA AAAA TTTATCTTCTTCTTT MS53_0328 371939 - 367338 - | hypothetical protein TERM 696 369617 - 369629 + g 79 -4.9 -5.49568 | CTTTAAGCAGATTTT CTTTT CTA AAAAG TTTTTCTTTTAGATT TERM 697 369851 - 369829 - G 75 -7.2 -4.09292 | opp_overlap 369829 AATTTAAGAATGAAA TTAGAATCAA ATT TTAATTCTAA ATCGTTATTTAAAAA TERM 698 369853 - 369881 + g 74 -6.9 -4.39133 | opp_overlap 369853 AATTTTAATTCTAAA TCGTTATTTAAAA ATA TTTCAAATGACGA TTTTACTAATTCTTC TERM 699 369938 - 369950 + g 70 -6.3 -4.10925 | TAATTAAATTTATTA CAAGT AAA ACTTG TTTTGCAGAGTCTAT TERM 700 370304 - 370294 - G 70 -5.4 -4.49132 | TCAAAGACAAAAGAA GCTA AAT TAGC AGTTAATTCACCTTT TERM 701 370457 - 370481 + g 75 -5.9 -4.78149 | TAGATACTTGGCTAA TTAAAAATGGA AAA TCGATTTTTAA TTTTTCACTTCTAGC TERM 702 370770 - 370785 + g 72 -3.3 -5.27335 | opp_overlap 370770, overlap 370758 370764 TTTTGATTTTACAAA TGATG TTAAGT CATCA TTTTTATTTAAAAAC TERM 703 371251 - 371277 + g 78 -8 -3.94853 | overlap 371252 TTAGCTCTTGGTGCT AGCGTTTTAAGC GCT GCTAAAAACGCA TTTAATCTTGCCTTG TERM 704 371252 - 371276 + g 91 -11.5 -2.96189 | overlap 371251 TAGCTCTTGGTGCTA GCGTTTTAAGC GCT GCTAAAAACGC ATTTAATCTTGCCTT TERM 705 371681 - 371664 - G 73 -5.5 -4.66609 | opp_overlap 371671 GATCTTAGCCAAAAA GGCAGCA TAAC TGCTCCC GGTTACTTCATTATT TERM 706 372300 - 372316 + H 73 -3.8 -5.42164 | TTATTTCTTTTTTGT TTTTCT TAGTT AGAAAA TTTTTATTATTTGTA MS53_0329 372359 - 374722 + | hypothetical protein TERM 707 375228 - 375216 - g 71 -2.7 -5.43553 | ACTGAAAAAATAAAA CTTTC ATG AAAAG AATTAAGGCAAGAAT TERM 708 375922 - 375876 - g 71 -2.5 -5.46629 | overlap 375878 AAGACTTCAAAAAAA TCTTAGATGAAAACCAAGAAT ATAAA ACTCTTAAAATTCATCTAAAA AGACTTCCACTAGTA TERM 709 376104 - 376086 - g 78 -8.2 -3.94773 | overlap 376082 CACTTAAAAAAGCAA TCCACAAC GAA GTTATGGA AGTTGCTAAAAGAGT TERM 710 376532 - 376509 - g 76 -4 -5.55855 | TTGAAAAAAATAAAA TCAAAGTTAA TAAT TTAACTCTAA AAAATAAATTTAAAG MS53_0330 374750 - 376840 + | putative ABC transporter ATP-binding protein TERM 711 376963 - 376951 - g 74 -2.7 -5.71712 | opp_overlap 376958 TTTTAGATAAAAAAA TTCCA ACT TGAAA GACACTTTTAATTCT ugpA 376893 - 377876 + | ABC transporter, permease protein ugpE 377866 - 378840 + | ABC transporter permease protein TERM 712 379282 - 379265 - g 74 -2.7 -5.69262 | TTAGAAAAACAAAAA TCAATGC CAAA GCATCAA AATTTAGTTGTTCAA TERM 713 379449 - 379459 + G 70 -5.4 -4.58663 | opp_overlap 379449 ATGAAATTAGAAAAG CTCT TGA AGAG TTTTTAAAAGATACT TERM 714 380451 - 380441 - g 74 -4 -5.24989 | GGAGAGACTAAAAAA CAAA CAA TTTG ATGACTTGAAGTCTT MS53_0333 379118 - 380668 + | hypothetical protein MS53_0334 380685 - 383000 + | hypothetical protein TERM 715 383030 - 383055 + F 100 -8.5 -5.73563 | opp_overlap 383029 383024 383030 AATTAATAATAAAAG TAAATAGCTTT TAGT AGAGCTATTTA TTTTTTTAATTTAAT MS53_0335 383078 - 383833 + | hypothetical protein TERM 716 384440 - 384417 - g 74 -4.7 -5.0538 | TTTTATTTTAAAAAA CCTTTCAAA AAGAAG TTTAAAAGG GCTAAAATTCACCGG MS53_0336 383833 - 384801 + | putative MgpA like-protein MS53_0337 384797 - 385753 + | putative MgpA like-protein MS53_0338 385844 - 386725 + | asparagine synthetase AsnA MS53_0339 386733 - 387461 + | putative PTS system, lichenan-specific IIA component TERM 717 387492 - 387476 - T 100 -5.1 -6.32976 | opp_overlap 387476 AAAAAAACAAAAAAA GCTCC AACAAAG GGAGC TTTTAAATTTCAATT ftsZ 389198 - 387570 - | cell division protein MS53_0341 390516 - 389347 - | hypothetical protein TERM 718 390459 - 390491 + g 75 -7.9 -3.96624 | opp_overlap 390459 390489, overlap 390461 390463 390489 390490 AATTATCTATATATA TTGATTCTGATAAAG AAA CTTTATCAGAATGTA TTTCTCATAGAAATA TERM 719 390461 - 390489 + g 88 -10.5 -3.57406 | opp_overlap 390459, overlap 390459 390463 TTATCTATATATATT GATTCTGATAAAG AAA CTTTATCAGAATG TATTTCTCATAGAAA TERM 720 390463 - 390487 + g 100 -13.1 -3.36228 | opp_overlap 390459, overlap 390461 390459 ATCTATATATATTGA TTCTGATAAAG AAA CTTTATCAGAA TGTATTTCTCATAGA TERM 721 390489 - 390507 + g 73 -3.2 -5.54079 | opp_overlap 390459 390489 390492, overlap 390459 390490 AAACTTTATCAGAAT GTATTTCT CAT AGAAATAG TTTTTTCATTTTTAG TERM 722 390490 - 390506 + g 70 -6.7 -3.90007 | opp_overlap 390459 390489 390492, overlap 390459 390489 AACTTTATCAGAATG TATTTCT CAT AGAAATA GTTTTTTCATTTTTA yabC 391424 - 390519 - | S-adenosyl-methyltransferase TERM 723 390595 - 390627 + g 71 -8 -3.15354 | overlap 390592 AGCTCTTGCTTTGAC GGATAAATTCTT CTAGTGGCA AAGAATTTATCC TCTTGAATTGGCATC MS53_0343 391857 - 391414 - | hypothetical protein TERM 724 391624 - 391639 + g 72 -6.2 -4.43877 | TTTATCAAGAGTTAT CTCAAA AGTA TTTGAG TTTATTTGACGCTTA TERM 725 391640 - 391681 + g 77 -3.1 -5.58454 | overlap 391656 TCAAAAGTATTTGAG TTTATTTGACGCTTAATTT GACG AATTTTTGCGTCAAATGGA TTTTTTTGATCTAAG TERM 726 391964 - 391945 - R 87 -2.9 -6.23317 | ATAAAAATAAAAAAA CCAGAAA TAAAAG TTTCTAG TTTTCGGCAATGGTA MS53_0344 392430 - 391984 - | hypothetical protein oppF-1 394828 - 392438 - | oligopeptide ABC transporter ATP-binding protein TERM 727 393133 - 393148 + g 72 -4.8 -4.82154 | GGTTTATATTATCGA TATCTA TATT TAGATA TTTTTGCTCTAAGTT TERM 728 393235 - 393263 + g 100 -5.3 -6.02546 | CTACTTTTGCGTTTT TAAGACTTCTAGC TTC GCTTGGGGTTTTA TTTTTTTTAGTTTCA TERM 729 393376 - 393394 + g 82 -8.2 -4.53334 | opp_overlap 393375 393378 CTTTTTTAAGCGAAT CACTAAGA GAG TCTTGGTG TTTGATTTTTTCTTT TERM 730 393415 - 393433 + g 83 -7.6 -4.75356 | TTTTTTCTTTAATTC TTTGAATT TTT AATTCAAA TTTTTCAATGTATTT TERM 731 393529 - 393552 + g 71 -2.6 -5.43866 | overlap 393530 CTGGATTTTTATCAG GTTTTAAAAA GAAG TTTTTAAAAG TTTTTTTAAGGCTTG TERM 732 394756 - 394768 + g 79 -3.5 -5.58209 | overlap 394758 TATTGACTGAGTTTT TATTT AGA AAATA TTTTTTTAAATTTGA oppD-1 395881 - 394883 - | oligopeptide ABC transporter, ATP-binding protein oppC-1 397221 - 395878 - | oligopeptide transport system permease protein TERM 733 397243 - 397254 + r 89 -4.4 -6.11392 | CTTTCTTAATTTTTA GCTT GTGC AAGC TTTTTTTCTTTATTT oppB-1 398357 - 397233 - | oligopeptide ABC transporter permease protein TERM 734 398314 - 398291 - G 100 -6.8 -5.84381 | opp_overlap 398294 398297 CCACTAAGAAAAAAA CAATAATTGC GATT GCAAATATTG TAAAAATAGCTAATA MS53_0349 401341 - 398366 - | putative lipoprotein pepF 403211 - 401376 - | oligoendopeptidase F TERM 735 403357 - 403314 - R 82 -7 -4.8543 | opp_overlap 403314 403317 403324 403355, overlap 403317 403324 TAATTTTTATAAAAA TAATAAAAAACGCTCTTTTT TGTT ACAAAAAGCGTCTTTTATAA ATTTATTTAATCGCG TERM 736 403354 - 403317 - R 85 -8.7 -4.52873 | opp_overlap 403314 403317 403324, overlap 403314 403324 TTTTTATAAAAATAA TAAAAAACGCTCTTTTT TGTT ACAAAAAGCGTCTTTTA TAAATTTATTTAATC TERM 737 403347 - 403324 - R 86 -4.6 -5.80727 | opp_overlap 403324 403317 403314, overlap 403317 403314 AAAAATAATAAAAAA CGCTCTTTTT TGTT ACAAAAAGCG TCTTTTATAAATTTA dnaK 405180 - 403390 - | molecular chaperone DnaK TERM 738 403606 - 403623 + g 74 -4.9 -5.17576 | gap 1, overlap 403605 AGCGTCAGCTTTATC GC-CTTGA GCT TCAAGCGC TTTTTTGACTTGGTC TERM 739 404052 - 404039 - G 70 -6.7 -3.90112 | TTTCTTGGAATTAAA GGAGT AGCT ACTCC TCCAAGAGTTTCAAT TERM 740 404512 - 404526 + g 71 -2.8 -5.48028 | GTATTTATCTTTAGA TACATC GTA GCTGTA TTTTGTTTTTATTTC TERM 741 405195 - 405205 + r 74 -2.6 -5.80003 | overlap 405194 TACTTTATTTATCCT TTTT TCA AAAA TTTTTTATTTCTTAA grpE 406160 - 405282 - | heat shock protein GrpE TERM 742 405653 - 405664 + g 77 -3 -5.58179 | CTTCAAATTGAGATT CTAA ATGC TTAG TTTTTTCTTCTAATG hrcA 407175 - 406153 - | heat-inducible transcription repressor fba 408120 - 407254 - | fructose-bisphosphate aldolase MS53_0355 408391 - 408128 - | hypothetical protein argS 410079 - 408424 - | arginyl-tRNA synthetase TERM 743 408570 - 408603 + g 72 -6.3 -4.28651 | opp_overlap 408562 408555 408575, overlap 408555 TATTAAATAAATTCG CTAAATTTATTAAAT ATTG AGTTAATAAATTTGG TTTTAGCGTTTTAGT TERM 744 409171 - 409195 + g 78 -8.7 -3.77831 | TTTATCATCGCCATA TTCACTTGTTT TTA AAACTAGTGAA TTTCCATCTTGATAA TERM 745 410159 - 410141 - H 90 -7.6 -5.01497 | opp_overlap 410140 410141 ATGATTATATAAAAA TGTTTTAA ATA TTAAAACA CTTTTCTAAATAATA TERM 746 411137 - 411149 + G 70 -4.9 -4.78752 | opp_overlap 411137, overlap 411130 TGCGATGTTTCAAAA GAAAT GGA ATTTC TTTTTGAATTATCAT cysS 410177 - 411397 + | cysteinyl-tRNA synthetase TERM 747 411528 - 411513 - g 75 -3.4 -5.42198 | opp_overlap 411519, overlap 411519 TTCTAAAAAAGAAAA TTTAAA GTAT TTTAAA AATACTAATTTTAAA TERM 748 411683 - 411655 - g 78 -9.1 -3.2946 | opp_overlap 411651 411655 411662, overlap 411648 411661 AATAAAATCTATGAA TCTAAACCTAAAA TAG TTTTAGTTTTAGA TCATATCATGGACAC TERM 749 411655 - 411683 + G 73 -9.1 -2.66316 | opp_overlap 411655 411648 411661, overlap 411651 411662 AATAAAATCTATGAA TCTAAACCTAAAA TAG TTTTAGTTTTAGA TCATATCATGGACAC MS53_0358 411418 - 412119 + | putative tRNA/rRNA methyltransferase TERM 750 412523 - 412509 - g 72 -5.7 -4.62313 | TAAAATCAAAAATAA CGCTA GCTAA TAGCG AAGTGTTTTTAGATT MS53_0359 412112 - 412699 + | hypothetical protein TERM 751 412695 - 412685 - f 70 -5.4 -4.68645 | CAGCTAAAAGCAAAA CTAG AAT CTAG CTAGAATTATTAACT secE 412884 - 413108 + | preprotein translocase subunit SecE nusG 413110 - 413718 + | transcription antitermination protein TERM 752 414794 - 414781 - g 71 -2.4 -5.47964 | opp_overlap 414781 AGAAAACAATAAAAA CTAC ATAAAA GTAG TTAATAAAAGCGATT trmE 413750 - 415141 + | tRNA modification GTPase TrmE TERM 753 415179 - 415193 + G 80 -5.8 -5.06414 | CGTTGACGCTCATGC TCATAT TTC ATATGA TTTTTATTCAAAAGC MS53_0363 415141 - 415947 + | hypothetical protein TERM 754 416012 - 416031 + G 91 -8 -4.87626 | opp_overlap 416012 416011 416014 ACGCGATAAAAATAT CATTAACA AAAT TGTTAATG TTTTTAATATTGAAA TERM 755 416031 - 416012 - g 70 -8 -3.02317 | opp_overlap 416012, overlap 416011 416014 ACGCGATAAAAATAT CATTAACA AAAT TGTTAATG TTTTTAATATTGAAA TERM 756 416125 - 416109 - g 95 -8.1 -5.41143 | opp_overlap 416109 GAGTTGTTAAAAAAA GCTAAAA AAG TTTTAGC TTTTGAAATTGATAA TERM 757 416109 - 416125 + G 80 -8.1 -4.20696 | opp_overlap 416109 GAGTTGTTAAAAAAA GCTAAAA AAG TTTTAGC TTTTGAAATTGATAA TERM 758 416637 - 416589 - g 84 -3.6 -5.83226 | gap 2 AATCGAAGAAAAAAA CTAACTTTTACTTTAAATAGAAAT TTT AATTCCACT-AAAGTAAA-GTTAG CTTATGAAAAATTAA ksgA 415947 - 416726 + | dimethyladenosine transferase MS53_0365 417159 - 416710 - | hypothetical protein TERM 759 416757 - 416774 + g 100 -9.9 -5.66926 | TATTATTTTGGTTTT CTTCTGG TTCT CCAGAAG TTTTATTTTTTTTAC MS53_0366 417763 - 417164 - | hypothetical protein MS53_0367 418233 - 417763 - | hypothetical protein TERM 760 417914 - 417924 + g 76 -4 -5.49569 | opp_overlap 417908 417914, overlap 417905 ATTAAATATGAAAAA GTAT TCG ATAC TTTTTTGTATTCATC tpx 418729 - 418238 - | thiol peroxidase MS53_0369 419070 - 418744 - | hypothetical protein TERM 761 418880 - 418914 + g 71 -4.4 -4.84353 | TTATAGGCAATATTG TTGATTTTTTCAAGAA TTT TTCTTGAAATTAGCAA TTTATTTTCATTTGT TERM 762 419018 - 419030 + g 75 -3.5 -5.51353 | opp_overlap 419018, overlap 419012 GCGATATTTGGAATA TTTTT TCT AAAAA TTTTTCTTCTTTTTC MS53_0370 420122 - 419271 - | hypothetical protein TERM 763 420641 - 420663 + G 90 -3.4 -5.95286 | opp_overlap 420635 420642 420644, overlap 420642 AACGCAAATTTAATT ACATTAACTC TAG GAGCTAATGA TTTTTTCTTTTTAAT TERM 764 420662 - 420642 - g 74 -9.1 -2.82156 | opp_overlap 420642 420641, overlap 420635 420644 ACGCAAATTTAATTA CATTAACTC TAG GAGCTAATG ATTTTTTCTTTTTAA TERM 765 420642 - 420662 + G 72 -6.9 -4.13511 | opp_overlap 420635 420642 420644, overlap 420641 ACGCAAATTTAATTA CATTAACTC TAG GAGCTAATG ATTTTTTCTTTTTAA TERM 766 423845 - 423822 - g 71 -4 -5.0925 | opp_overlap 423821 TCTTAAAATCAAAAA TAGATTTAAA TGTA TTTGAATCTA ATAATTATCAAATAT TERM 767 424085 - 424073 - g 72 -6.3 -4.40601 | opp_overlap 424073 AATTTATATAACAAA GCTTT TTC AAAGC TAATTTCTAGTCCAA MS53_0371 420137 - 424393 + | hypothetical protein TERM 768 424575 - 424564 - T 89 -4.4 -6.11229 | opp_overlap 424564 ATTAAAATAAAAAAA TAGC CTTA GCTA TTTAGTGCATGTGAA MS53_0372 425602 - 424577 - | hypothetical protein MS53_0373 426334 - 425612 - | hypothetical protein TERM 769 425955 - 425939 - G 74 -8.1 -3.53012 | opp_overlap 425938 TCCTTTGTGGTCAAA GACAAAT GGA ATTTGTC CGGTTTTTCCAAGAC TERM 770 426278 - 426290 + g 76 -4.1 -5.4251 | AATTTTTCCTCTTGC TGCAT CCT GTGCA TTTTTTCTATGTGCA TERM 771 426515 - 426542 + H 71 -5.8 -4.39092 | gap 1, overlap 426534 ATATTTTAATTAGCC TAATTTTAGCACG TTT TG-GCTAAAATTA TTTAGTTTTTAATTT TERM 772 426774 - 426748 - g 100 -8.8 -5.31519 | ATATTTAAATAAAAA TGGTGATCCTGA AGA TCAAGATGACCA AAGTAAAAAGCCTGT MS53_0374 426596 - 428404 + | hypothetical protein TERM 773 428444 - 428411 - f 100 -7.8 -5.25772 | gap 1, opp_overlap 428411 AAAGCATAAGAAAAA TTAAAAAACC-TCTA TTTTT TAGATGGTTTTTTAA TTTTTAATCATAATA TERM 774 428411 - 428444 + F 89 -7.8 -4.78107 | gap 1, opp_overlap 428411 AAAGCATAAGAAAAA TTAAAAAACC-TCTA TTTTT TAGATGGTTTTTTAA TTTTTAATCATAATA trmU 428485 - 429603 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 775 429644 - 429667 + G 75 -5.5 -4.89477 | overlap 429648 TAGAAAAGCATGACT TGATTTTTT TGAATC AAAAAATCA TTTTATTGTTCCCCC TERM 776 431036 - 431014 - g 95 -10.8 -4.28548 | ATTCAGTGAGCAAAA TTCTTCATTT ACT AAATGAAGAA AATGAGCTAAGTGAA alaS 429612 - 432248 + | alanyl-tRNA synthetase MS53_0377 432272 - 432649 + | hypothetical protein MS53_0378 432657 - 433328 + | hypothetical protein greA 433383 - 433856 + | transcription elongation factor GreA MS53_0380 433889 - 434563 + | putative deoxyguanosine kinase TERM 777 434719 - 434734 + G 74 -6.2 -4.45083 | opp_overlap 434719 434718 TTAAAAAACTAGAAG TCGATT TTGC AATCGA TTTTATGACTCTAAG hpt 434559 - 435095 + | hypoxanthine-guanine phosphoribosyltransferases TERM 778 435099 - 435126 + F 83 -7.9 -4.38712 | TCAAATGAATAATTT TTAAAAATCGC TTCAAT GCGGTTTTTAA TTTTCTAAAAATGCA TERM 779 435738 - 435757 + G 73 -8 -3.34609 | opp_overlap 435738, overlap 435736 435733 GAAACAATAACTAAA TTAGGTAA AAGT TTACCTAA TATTAATTTACATAA TERM 780 435757 - 435738 - g 80 -8 -4.17355 | opp_overlap 435738 435736 435733 GAAACAATAACTAAA TTAGGTAA AAGT TTACCTAA TATTAATTTACATAA lip3 435201 - 435989 + | triacylglycerol lipase TERM 781 436503 - 436482 - g 78 -7.5 -4.29432 | overlap 436495 GAAAGCTTATCAAAA TTTAAAAAG ATTA CTTTTTAAA AACATTTTTTATAAA TERM 782 436523 - 436506 - g 72 -5.7 -4.58663 | overlap 436495 ATTACTTTTTAAAAA CATTTTT TATA AAAAATG AAAAGAAGTAGCTCA MS53_0383 435982 - 437160 + | putative glycerol transporter subunit A TERM 783 437180 - 437166 - g 70 -2.2 -5.40072 | TGTTTCTTAAAAAAA TAAAAT TAA ATTCTA AGTCACTAATTGGTT TERM 784 437803 - 437791 - g 70 -4.9 -4.74103 | overlap 437796 TGTTGAACTTAAAAA TACAA TAT TTGTA ATAATGCTAACTAAT MS53_0384 437150 - 438103 + | putative glycerol transporter subunit B MS53_0385 438084 - 438893 + | putative glycerol transporter subunit C MS53_0386 438904 - 440802 + | putative lipoprotein TERM 785 440805 - 440849 + T 100 -10.3 -5.4477 | opp_overlap 440805 440807 440821, overlap 440807 440821 TAGAAAACTTTAAAA TAGGCGATTAAAAAAACAGAA ATT TTCTGTTTTTTTAATATCCAA TTTTTTTAAGAATTT TERM 786 440849 - 440805 - T 91 -10.3 -4.29656 | opp_overlap 440805 440807 440821, overlap 440807 440821 TAGAAAACTTTAAAA TAGGCGATTAAAAAAACAGAA ATT TTCTGTTTTTTTAATATCCAA TTTTTTTAAGAATTT TERM 787 440847 - 440807 - T 100 -12.9 -3.73411 | opp_overlap 440805 440807 440821, overlap 440805 440821 GAAAACTTTAAAATA GGCGATTAAAAAAACAGAA ATT TTCTGTTTTTTTAATATCC AATTTTTTTAAGAAT TERM 788 440807 - 440847 + T 95 -12.9 -2.90056 | opp_overlap 440807 440805 440821, overlap 440805 440821 GAAAACTTTAAAATA GGCGATTAAAAAAACAGAA ATT TTCTGTTTTTTTAATATCC AATTTTTTTAAGAAT TERM 789 440833 - 440821 - T 100 -6.3 -5.52986 | opp_overlap 440807 440805 440821, overlap 440807 440805 AGGCGATTAAAAAAA CAGAA ATT TTCTG TTTTTTTAATATCCA TERM 790 440821 - 440833 + T 100 -6.3 -5.58454 | opp_overlap 440821 440807 440805, overlap 440807 440805 AGGCGATTAAAAAAA CAGAA ATT TTCTG TTTTTTTAATATCCA era 441690 - 440839 - | GTP-binding protein Era TERM 791 441375 - 441385 + g 80 -4 -5.56112 | TAATTACAGCAACTT TGTT TTT AACA TTTTTTAGTTTTTCT cdd 442078 - 441707 - | cytidine deaminase MS53_0389 442589 - 442110 - | hypothetical protein MS53_0390 442926 - 442597 - | hypothetical protein TERM 792 442683 - 442699 + g 73 -8 -3.51034 | overlap 442678 TTTTTGATTTTAGCT CGCTAG CTATT CTAGCG TCTTTAATATAAATC MS53_0391 444973 - 442958 - | putative ABC transporter ATP-binding TERM 793 444277 - 444300 + g 78 -2.6 -5.87996 | gap 1 TTATAAAAAGCGATT TAATTTC-ACA AAT TGTTGAAGTTA TTTTTTTATTAATTA TERM 794 444500 - 444484 - G 74 -2.4 -5.58074 | CAAGCAGTAAAAAAA TAAAAT AAATG ATTTTA TATAAAAATAAGTTT TERM 795 445136 - 445118 - g 70 -6.8 -3.99559 | overlap 445116 GAATTAAAAGAAAGA CTTGAAAA ACA CTTTCAAG CATTAGGTTATAAAA TERM 796 445173 - 445157 - g 70 -8.1 -2.98387 | overlap 445154 445159 GGTTATAAAATAGTA GATTTAG GTG CTAAATC AAATCTGGATTCAGA TERM 797 445466 - 445447 - g 81 -8.6 -4.20797 | overlap 445449 TGAAAATTATATAAA TACCACCT TTGA AGGTGGCA GACATCTTAAAAGAA TERM 798 445464 - 445449 - g 80 -9 -3.68627 | overlap 445447 AAAATTATATAAATA CCACCT TTGA AGGTGG CAGACATCTTAAAAG rpiB 445061 - 445504 + | ribose-5-phosphate isomerase B cls 445507 - 447021 + | cardiolipin synthetase TERM 799 447029 - 447005 - f 73 -8.7 -3.27525 | overlap 447009 TTGTTTTAAATTGAA TAAAGCCCCTA ATT TAAGAGCTTTA AAGCAAACTATGATA ptsH 447078 - 447341 + | phophocarrier protein HPr TERM 800 447377 - 447360 - T 84 -9.9 -3.62518 | opp_overlap 447360 TTAAACACTTTCAAA GTCGATG TTCT CATCGAC TTTTTTTTGCGCTTT TERM 801 447360 - 447377 + T 100 -9.9 -5.82388 | opp_overlap 447360 TTAAACACTTTCAAA GTCGATG TTCT CATCGAC TTTTTTTTGCGCTTT MS53_0395 448193 - 447345 - | hypothetical protein comEB 448737 - 448228 - | deoxycytidylate deaminase fusion protein folA 449201 - 448734 - | dihydrofolate reductase TERM 802 448827 - 448838 + g 80 -5.8 -5.1287 | opp_overlap 448826 ATTTAAATACACATC GCCT TCAT AGGC TTTTTTGACTCTAGA thyA 450070 - 449201 - | thymidylate synthase TERM 803 449257 - 449282 + g 89 -7.7 -5.02231 | opp_overlap 449259 449281, overlap 449281 AATTTTCAAGCTCAA TATCTTCGAAT GTAA AATCGAAGATA TTTTTAATATTTTTA TERM 804 449831 - 449865 + g 79 -9.7 -3.20345 | gap 1, opp_overlap 449836, overlap 449829 449836 GTAAGGCCATTCATT TCAAATATTTACGTTG TTAT CAAC-TAAATATTTGA TGTTGGTATCACCTT TERM 805 450195 - 450180 - H 78 -3.4 -5.63857 | AAAAATGGAAAAAAA TTAAAA AAAA TTTTAA ATTAGACTAATTTTG nrdF 450378 - 451397 + | ribonucleotide-diphosphate reductase subunit beta nrdI 451415 - 451846 + | ribonucleotide reductase stimulatory protein TERM 806 452542 - 452556 + G 70 -7.8 -3.34233 | opp_overlap 452542 TTCAAGGGCAAGCTA CCGGAG TTA TTCCGG TTATGAAAATTCTAG nrdE 451869 - 454043 + | ribonucleotide-diphosphate reductase subunit alpha TERM 807 454083 - 454053 - T 74 -2.7 -5.72616 | opp_overlap 454050 454058 ATCTAGAGAAAAAAA GAAAACTAAGC ATTAATTTG GCTTAGTTTTT TTGTGCTTATTTTGA TERM 808 454058 - 454078 + T 74 -2.6 -5.73339 | opp_overlap 454053, overlap 454050 GAGAAAAAAAGAAAA CTAAGC ATTAATTTG GCTTAG TTTTTTTGTGCTTAT TERM 809 454129 - 454103 - T 86 -9.6 -3.87815 | opp_overlap 454103 454109, overlap 454109 GCTTATTTTGACAAA CAAAAACTAGCT TTA AGCTAGTTTTTT GATTTTAACAACTAT TERM 810 454103 - 454130 + T 77 -9.4 -3.06341 | gap 1, opp_overlap 454103 454109, overlap 454109 GCTTATTTTGACAAA CAAAAA-CTAGCT TTA AGCTAGTTTTTTG ATTTTAACAACTATT TERM 811 454109 - 454123 + T 100 -8.6 -5.46698 | opp_overlap 454103 454109, overlap 454103 TTTGACAAACAAAAA CTAGCT TTA AGCTAG TTTTTTGATTTTAAC TERM 812 454123 - 454109 - T 100 -8.6 -5.38054 | opp_overlap 454109 454103, overlap 454103 TTTGACAAACAAAAA CTAGCT TTA AGCTAG TTTTTTGATTTTAAC MS53_0402 455637 - 454141 - | hypothetical protein TERM 813 454261 - 454273 + g 70 -6.3 -4.15201 | opp_overlap 454256 454261 454260 ATCAAAGTTAGCAAG TGTTG CAG CAACA TTTAATTTAGTTACT TERM 814 455186 - 455166 - G 71 -7.7 -3.62522 | opp_overlap 455166 455180, overlap 455167 CAAGTGCTTTAATAA CTTTAGCTA CGC TAGCTAAAA GATCTTTAGCTTTTT TERM 815 455185 - 455167 - G 73 -9 -2.77192 | opp_overlap 455166 455180, overlap 455166 AAGTGCTTTAATAAC TTTAGCTA CGC TAGCTAAA AGATCTTTAGCTTTT TERM 816 455180 - 455196 + g 73 -5.2 -4.67353 | opp_overlap 455167 455166, overlap 455166 ACTTTAGCTACGCTA GCTAAA AGATC TTTAGC TTTTTCAGTAAATGC MS53_0403 456345 - 455722 - | hypothetical protein atpC 456795 - 456382 - | putative ATP synthase epsilon subunit TERM 817 456546 - 456562 + g 74 -8.1 -3.58329 | opp_overlap 456546 456551, overlap 456551 CCTCAATTTTTACAA TATCATC GGT GATGATA TTTACCGACTCTTTG TERM 818 456562 - 456546 - G 73 -8.1 -3.33261 | opp_overlap 456546 456551, overlap 456551 CCTCAATTTTTACAA TATCATC GGT GATGATA TTTACCGACTCTTTG atpD 458189 - 456795 - | F0F1 ATP synthase subunit beta TERM 819 457043 - 457067 + g 78 -8.7 -3.81137 | opp_overlap 457046, overlap 457046 457065 GCTCACCCATTCCAA GAATTGCAATA ATA TCTTGCAATTC TTTAAATCTTTGAAG atpG 459066 - 458197 - | F0F1 ATP synthase subunit gamma atpA 460651 - 459059 - | F0F1 ATP synthase subunit alpha TERM 820 459606 - 459579 - G 74 -8.6 -3.20617 | gap 1, opp_overlap 459583, overlap 459583 ACGCTAAATCCAACA TCAACTGCAGGAC GCT GTCCTG-AGTTAA ATAAACTTTCTTTAG TERM 821 460595 - 460578 - G 75 -8.5 -3.36492 | opp_overlap 460577 TTTCCAACTTCAGAA CGATCAA TTTT TTGATCG AAATTTTTAATTCTA atpH 461192 - 460641 - | ATP synthase delta chain TERM 822 460771 - 460784 + g 70 -5.3 -4.51121 | TTTTCATCTACTTCG GTTGA TATT TCAAC TATTTTTTTAGTTTT TERM 823 460888 - 460918 + g 89 -7.8 -5.06414 | opp_overlap 460891 TTAATTCCAAGTTCA TAATTGGTGATTTT TAA AAAGTCAACAATTA TTTTTCTTAGCACGA atpF 461734 - 461192 - | ATP synthase B chain TERM 824 461296 - 461310 + g 75 -8.6 -3.4691 | opp_overlap 461290, overlap 461292 461290 TTTGAGCAATTTCAG TTGCAG TTT CTGCAA TTAATATTCTTGAGT TERM 825 461514 - 461533 + g 86 -9.4 -3.82665 | GCTTGAGATAGTTTT GCTAAAGA GTCT TCTTTAGC TTTAATGCTATCATC atpE 462090 - 461773 - | ATP synthase C chain TERM 826 462137 - 462147 + r 90 -6.8 -5.18355 | TAATATTAGTATATT GCCT GAG AGGC TTTTTCCTTTTTAGA atpB 462930 - 462127 - | F0F1 ATP synthase subunit A TERM 827 462191 - 462201 + g 78 -2.6 -5.74684 | TTTGCCATTTTTTCT TTAA AGG TTAA TTTTTGTTTTTCTTC MS53_0412 463428 - 462943 - | hypothetical protein TERM 828 463720 - 463704 - H 90 -5.2 -5.80817 | TTGAATACAAAAAAA GAAGAA GTAGT TTCTTC ACCTGAAGCTACAGT rpsB 463767 - 464579 + | 30S ribosomal protein S2 TERM 829 464664 - 464654 - g 77 -5.4 -5.0538 | overlap 464655 GGTGATGTTAAAAAA GCTT TAG AAGC TACAGATTACAATAT tsf 464579 - 465457 + | elongation factor EF-Ts TERM 830 465466 - 465494 + T 100 -14.9 -4.24745 | opp_overlap 465474, overlap 465474 AAAATAATTTTGCTC TTAAAAAACTAGC GTT GCTAGTTTTTTAA TTTGTCTTGATAGTA TERM 831 465486 - 465474 - T 90 -7.7 -5.00616 | opp_overlap 465466 465474 TTTGCTCTTAAAAAA CTAGC GTT GCTAG TTTTTTAATTTGTCT TERM 832 465474 - 465486 + T 95 -7.7 -5.4387 | opp_overlap 465474, overlap 465466 TTTGCTCTTAAAAAA CTAGC GTT GCTAG TTTTTTAATTTGTCT MS53_0415 467957 - 465483 - | hypothetical protein TERM 833 467250 - 467261 + g 70 -3 -5.29846 | TCCAAAAGCTTCGTA GAAT AATA ATTC TTTTTGTTTAAAATT TERM 834 467509 - 467519 + g 71 -2.6 -5.48825 | AAAGAAAAACTAGGA TTAA AAA TTAA TTTTTTTGAATCATC MS53_0416 468017 - 468871 + | hypothetical protein TERM 835 469038 - 469060 + G 80 -6.4 -4.85918 | opp_overlap 469038 TTTATTTAGAAGGAA TTCTTCTC GAGGCCA GAGAAGAA TTTTCTTATATCATG rsuA 468884 - 469582 + | 16S rRNA uridine-516 pseudouridylate synthase family protein MS53_0418 472053 - 469579 - | hypothetical protein TERM 836 470652 - 470674 + g 79 -9.4 -3.1585 | opp_overlap 470658, overlap 470658 470662 TAGCATTAATTTCTT TGTAAATATT TTG AATATTTACA TCTTCAATTGAATCG TERM 837 470771 - 470800 + g 80 -5.3 -5.24515 | opp_overlap 470792 470794, overlap 470794 TTATTTAGTCTTAAA TTTTTTGTATTTA ATTC TAAATATAAAGAA TTTTCTTTATTTATT TERM 838 471098 - 471083 - G 75 -3.4 -5.46706 | overlap 471095 ACTTCAAAATAAAAA TTAATT AAAT AATTAA ATCTTAAAGAGACTT TERM 839 471570 - 471594 + g 83 -8.7 -4.47284 | TATCGATAAAAGCCT TTATTTGAGCT TTA AGCTCTAATAA TTCTTTATTTATTTC TERM 840 471930 - 471965 + g 70 -5.8 -4.41422 | gap 1, opp_overlap 471957, overlap 471932 471954 AATTAACCAGCTGCG AATCTGA-ATTAAATTT TGA AAATTTAATATCAGATA TTATTTTATATATCG TERM 841 471932 - 471963 + g 78 -8.4 -3.79765 | gap 1, opp_overlap 471957, overlap 471930 471954 TTAACCAGCTGCGAA TCTGA-ATTAAATTT TGA AAATTTAATATCAGA TATTATTTTATATAT TERM 842 472125 - 472103 - R 100 -5 -6.18768 | opp_overlap 472103, overlap 472105 AAAAGAGAAAAAAAA TGGAAAAA ACCTAAG TTTTTCCA TTTCAAAATTTAAAT MS53_0419 472637 - 472146 - | hypothetical protein TERM 843 472396 - 472382 - G 70 -5 -4.65168 | AGTATACTTTAAAAA CAATAG GAA CTACTG TGGCTAAAAGTCCTC TERM 844 473022 - 473035 + G 75 -5.3 -4.84359 | AGTTTCTTAGTTGGG GCAAA TATT TTTGC TTTTTCTAACGATGA TERM 845 473108 - 473094 - g 75 -3.6 -5.4477 | opp_overlap 473096, overlap 473096 AAATTTGCAAAAAAA CACAAA GAA TTTGTA GTTTTAAAAGCCGGT rplJ 472785 - 473282 + | 50S ribosomal protein L10 rplL 473319 - 473690 + | 50S ribosomal protein L7/L12 TERM 846 473730 - 473704 - T 76 -6.7 -4.39828 | opp_overlap 473710, overlap 473694 473710 AATAGTTTCATAAAA TAAAAATTCGC GCCTT GCGAATTTTTT TTACTACATTTTGAT TERM 847 473710 - 473724 + T 100 -6.4 -5.86965 | opp_overlap 473710 473704 TTCATAAAATAAAAA TTCGCG CCT TGCGAA TTTTTTTTACTACAT TERM 848 473724 - 473710 - T 90 -5.7 -5.54907 | opp_overlap 473710, overlap 473704 TTCATAAAATAAAAA TTCGC GCCTT GCGAA TTTTTTTTACTACAT asnC 475077 - 473734 - | asparaginyl-tRNA synthetase TERM 849 474739 - 474755 + g 71 -4.5 -4.8743 | ATGAGGAATTTCTCT TAAAGTT TCA AGCTTTA TTTCTTTATTTTGAA MS53_0423 475249 - 476967 + | putative amino acid permease TERM 850 476988 - 476965 - T 100 -9.8 -5.09426 | opp_overlap 476965 TTTAAGCCTAAAAAA TAAAAAAGCA TTTC TGCTTTTTTA TTTTTTTTCATTTTG TERM 851 476965 - 476988 + T 100 -9.8 -6.07969 | opp_overlap 476965 TTTAAGCCTAAAAAA TAAAAAAGCA TTTC TGCTTTTTTA TTTTTTTTCATTTTG TERM 852 477017 - 477029 + T 74 -7.7 -3.86944 | opp_overlap 477017 TGGAAATTAAAAAAA TAGCC ATT GGCTA TTTGCTCATTATAAC TERM 853 477029 - 477017 - T 100 -7.7 -5.72207 | opp_overlap 477017 TGGAAATTAAAAAAA TAGCC ATT GGCTA TTTGCTCATTATAAC TERM 854 477129 - 477101 - T 70 -6.2 -4.15788 | opp_overlap 477101 477106 AAGTTTTTTAATAAA TAAAATGAACGA TAAAT TTGTTCATTTTA TTTATACAGAAAAAA TERM 855 477101 - 477129 + T 82 -8.4 -3.85698 | opp_overlap 477101, overlap 477106 AAGTTTTTTAATAAA TAAAATGAACGA TAAAT TTGTTCATTTTA TTTATACAGAAAAAA TERM 856 477391 - 477375 - T 90 -5.9 -5.46706 | opp_overlap 477383, overlap 477369 477376 ATGTCAAAATAAAAA CCGATTT TTA AAATCGA CAATTTTATTAAATT TERM 857 477390 - 477376 - T 74 -7.2 -3.86397 | opp_overlap 477383, overlap 477369 477375 TGTCAAAATAAAAAC CGATTT TTA AAATCG ACAATTTTATTAAAT TERM 858 477477 - 477492 + T 71 -2.6 -5.63103 | TTTTTCAATTTCAAC TAAGGT TTTG ACTTTA TTTTTTTGGTTAAGC hlyC 478703 - 477456 - | hemolysin C TERM 859 477503 - 477526 + g 93 -5.4 -5.9218 | overlap 477506 CTTTATTTTTTTGGT TAAGCTTTAA GACT TTAAAGCTAA TTTTTTTGTTATCTA TERM 860 477709 - 477725 + g 73 -4.5 -5.18297 | overlap 477701 AGAGATTTTTCTCAA GAAATTT CAT GAATTTC TTTTATTTCTTCTTG TERM 861 477981 - 477995 + g 80 -5.8 -5.00884 | AAGTAGAACTATTCC GATAAA GTT TTTATC TTTTTTAACCGGCAT TERM 862 478690 - 478661 - G 82 -5.3 -5.42605 | opp_overlap 478670 TTAATAAAAATAAAA TAAAAATAATAAT AAAT ATTGTTATTTTTA TGCCTATACCCAAAT dnaB 480226 - 478730 - | replicative DNA helicase TERM 863 479227 - 479237 + g 71 -4 -5.0925 | overlap 479232 CAAGATCTTCATTAT CTTT TTT AAAG TTTTTAATTTTCCAA rplI 480701 - 480243 - | 50S ribosomal protein L9 TERM 864 480383 - 480401 + g 72 -6.8 -4.0825 | GCTTGATTTTGTGTT CTAAAAGC TTG GTTTTTAG TTCTTTAGTTGAAAC MS53_0427 482724 - 480682 - | DHH subfamily 1 protein TERM 865 481806 - 481821 + g 95 -9 -5.07107 | overlap 481818 CTCCACCACGGTTTT GCGCTA CCAC TAGCGC TTTTTTAGCGCTTTC TERM 866 481818 - 481832 + g 75 -7.1 -4.08689 | overlap 481806 TTTGCGCTACCACTA GCGCT TTTTT AGCGC TTTCTAGCTTTTCTT MS53_0428 484370 - 482736 - | hypothetical protein TERM 867 482850 - 482877 + g 70 -2.9 -5.22039 | opp_overlap 482815, overlap 482815 GGCTTGAGATTTTTC TTTATTATTAG GATCGA CTAAAAATAAA TTTTTTGAATTTCCA TERM 868 483971 - 484000 + g 93 -11.6 -3.794 | ATTTTTGGATTTGTT CCATTAGCGCAT TTAAAT ATGCGTTAATGG TTTCATCGCTTACAA TERM 869 484084 - 484098 + g 72 -6.4 -4.39092 | ACTTTTAAAACGGTA GCTTGA ACT TCAGGC TTTACTTTTTGCTTT MS53_0429 485291 - 484404 - | hypothetical protein TERM 870 484711 - 484698 - G 73 -3.1 -5.4505 | GTTTCTAACAAAAAA TGGAA TAAG TCCCA CAAATCTATATCCTG MS53_0430 486342 - 485302 - | hypothetical protein TERM 871 485368 - 485385 + g 71 -4.1 -5.10163 | opp_overlap 485368, overlap 485382 TGTGCTTTGGTATAA GCTGTAA AGTT TTTCAGC TTTTGTTTTAAAGTT TERM 872 486202 - 486216 + g 100 -8.6 -5.40004 | opp_overlap 486201 ATCGCTATAAAATTG GCTAAC TAC GTTAGC TTTTTTAGTTTCATA efp 487599 - 487039 - | elongation factor P TERM 873 487375 - 487391 + g 77 -2.3 -5.75538 | AATATTTGAATCATC TGAATAT AAA AAATTCA TTTTTCTTTTTTCAA TERM 874 487703 - 487688 - H 90 -5.4 -5.65927 | TAGGCAAATAAAAAA GCAAGC TCTC ACTTGC ATATGGTGCCCGGAA MS53_0432 487830 - 488330 + | hypothetical protein TERM 875 488547 - 488559 + T 77 -7.7 -4.24432 | opp_overlap 488547, overlap 488542 TTTGCAAAGAAAAAA CCACT TTA AGTGG TTTCGTTTTAACTTT TERM 876 488559 - 488547 - T 100 -7.7 -5.63517 | opp_overlap 488547 488542 TTTGCAAAGAAAAAA CCACT TTA AGTGG TTTCGTTTTAACTTT MS53_0433 492023 - 488874 - | putative ATP-binding protein TERM 877 489010 - 489021 + g 73 -3 -5.55664 | overlap 489000 TCGTAGATATCACCA TATC TTTT GATA TTTTTTTCATAGTCA TERM 878 490180 - 490205 + g 89 -6.3 -5.38951 | opp_overlap 490180, overlap 490200 490202 TTATCAGGTGGAAGA TTCATAGCA TTAGCATT TGCTATGAA TTTTTTATATAAATT TERM 879 490233 - 490219 - G 72 -7.2 -4.03978 | opp_overlap 490202 490219 AATTTTTTATATAAA TTCATC TTA GATGAA TCGTATTGTGATATT TERM 880 490492 - 490516 + g 91 -7.3 -5.34857 | overlap 490496 ACTTCAATGGCTTTT TTTCTCTTTAA AGA TAAAAGAGAAA TTTTATTTTCTTTAA MS53_0434 492411 - 492043 - | putative PTS system glucose-specific enzyme IIB component TERM 881 492498 - 492470 - R 83 -4.7 -5.46698 | gap 1, opp_overlap 492470 492474, overlap 492473 TTGAAAATTAAAAAA GATCCTTCAAGG TAAATG CCCTGAAG-ATC TTTTTTGAAATTAAG MS53_0435 493054 - 492551 - | hypothetical protein TERM 882 493035 - 493045 + g 76 -4 -5.51165 | ATATTAGCTTTCGCG TCTT GTC AAGA TTTTTTTAAAATTTT aspS 494782 - 493082 - | aspartyl-tRNA synthetase TERM 883 494699 - 494671 - G 73 -9.1 -2.64472 | opp_overlap 494676, overlap 494676 GATCTCTTAAATCGA CAAAAGAAATTTT TCC AAATTTTCTTTTG GTTGCAACTCATCCA hisS 496295 - 494799 - | histidyl-tRNA synthetase TERM 884 495145 - 495158 + g 73 -5.3 -4.68511 | overlap 495152 GAATTTAGTTTTTTA GCTTT TTCA AAAGC TTTGTTTCTATTAGG TERM 885 495761 - 495779 + g 100 -6.8 -5.75599 | opp_overlap 495760 ATTCTAGAAGATATT TATGAAGG GTT TCTTCATA TTTTTTTCTAGTTTC MS53_0438 497922 - 496276 - | hypothetical protein TERM 886 497266 - 497282 + g 73 -2.9 -5.40474 | overlap 497263 497260 GCTAACAATTAATGA GTCATTG GTT CATTGGC TTTTTTTCAGCAAAT TERM 887 497985 - 497997 + H 70 -6.3 -4.12198 | opp_overlap 497985 TATATAACAAAAAAA TTAGC GGC GCTAA TTTTCCCACATTGTA TERM 888 497997 - 497985 - H 100 -6.3 -5.9218 | opp_overlap 497985 TATATAACAAAAAAA TTAGC GGC GCTAA TTTTCCCACATTGTA TERM 889 498028 - 498059 + H 100 -9.7 -5.93809 | ACTTCCAAGTTATCA CTCTCAAAAAAAT ATTAAA ATTTTTTTGGGAG TTTTTTTTATCAAAA TERM 890 498113 - 498098 - H 100 -7.6 -5.59962 | opp_overlap 498098 TAAAAGAAAGAAAAA TGCTCT CAAG AGAGCA TTCATATATAACCAT TERM 891 499256 - 499226 - H 80 -4.3 -5.57396 | gap 2, opp_overlap 499229 499230 499231, overlap 499231 ATAACTAATAAAAAA TAAAA--GCCGATTT TTA AAATCGGCAATTTTA TTATATTGTAAGTGG TERM 892 499229 - 499251 + H 74 -4.8 -4.92791 | opp_overlap 499226 499231, overlap 499230 499231 ACTAATAAAAAATAA AAGCCGATTT TTA AAATCGGCAA TTTTATTATATTGTA TERM 893 499230 - 499250 + H 77 -8.3 -3.54048 | opp_overlap 499226 499231, overlap 499229 499231 CTAATAAAAAATAAA AGCCGATTT TTA AAATCGGCA ATTTTATTATATTGT TERM 894 499249 - 499231 - H 100 -11.8 -5.55001 | opp_overlap 499230 499229 499231, overlap 499226 TAATAAAAAATAAAA GCCGATTT TTA AAATCGGC AATTTTATTATATTG TERM 895 499231 - 499249 + H 87 -11.8 -2.70802 | opp_overlap 499231 499226, overlap 499230 499229 TAATAAAAAATAAAA GCCGATTT TTA AAATCGGC AATTTTATTATATTG TERM 896 499419 - 499394 - H 76 -7.1 -4.41241 | opp_overlap 499394 499400, overlap 499398 TAAATTTTGATAAAA TAAACATATGT TGCC ACATATATTTA TAGTTCATATATATA TERM 897 499516 - 499530 + H 100 -8.6 -5.64006 | opp_overlap 499515 499516 499518 TTTTTATTTAACAAG CAGACT AAA AGTCTG TTTTTTTGCTTAAGT TERM 898 499530 - 499516 - H 71 -8.6 -2.80344 | opp_overlap 499516, overlap 499515 499518 TTTTTATTTAACAAG CAGACT AAA AGTCTG TTTTTTTGCTTAAGT TERM 899 500276 - 500262 - g 84 -3.6 -5.75342 | GTGTTTTAAAAAAAA CAAAAG TAC CTTTTA AAAATGACGTTGATT MS53_0440 499922 - 500794 + | putative cytosine-specific methyltransferase TERM 900 501734 - 501762 + G 80 -9.1 -3.61654 | opp_overlap 501728 501727 501739, overlap 501739 501758 TAATAAATGGCCATT CATAATTCCTT CATATCA AAGGAATTATG TTTGGGATAAATATA TERM 901 503503 - 503488 - g 72 -3.4 -5.32608 | AAAAAATTGAAAAAA TTATTA GTGA TAATAA AAGAACAATTTCAAT MS53_0441 500820 - 503696 + | hypothetical protein TERM 902 503984 - 504008 + G 83 -6.6 -4.86954 | TATTGTTTTTGGAAT TTCTTTTTGA TATCT TCAAGAAGAA TTATTTTTTGTTGTT MS53_0442 503703 - 504101 + | hypothetical protein TERM 903 504457 - 504469 + G 77 -6.3 -4.81644 | opp_overlap 504455 504457 AAAAGATTTTAAATA TGATC AAT GATCA TTTTGGTTTTCTTTA MS53_0443 504359 - 504607 + | hypothetical protein TERM 904 504937 - 504921 - T 77 -2.3 -5.84011 | overlap 504923 AATAAAAAATAAAAA CATAACT TTG AGTTATT CCCACATTGTAACTT TERM 905 504964 - 504995 + T 100 -11.9 -5.7946 | opp_overlap 504961 ACTTCCAAGTTACCA CTCTCAAAAAAAT ATTAAA ATTTTTTTGAGAG TTTTTTTGTTAAAAA TERM 906 505343 - 505285 - T 88 -10.3 -3.85165 | gap 1, opp_overlap 505300, overlap 505292 505293 505300 505309 CACTTTAAACTTAAA TCTGAAATTTATAAATTTAAAGAATTTA AAGA CAAATTCTTTAAATTTATAA-CTCCAAA GAAATGCCAATTGAA TERM 907 505337 - 505292 - T 95 -11.7 -3.72765 | opp_overlap 505300, overlap 505285 505293 505300 505309 AACTTAAATCTGAAA TTTATAAATTTAAAGAATTTA AAGA CAAATTCTTTAAATTTATAAC TCCAAAGAAATGCCA TERM 908 505336 - 505293 - T 100 -15.2 -2.82936 | opp_overlap 505300, overlap 505292 505285 505300 505309 ACTTAAATCTGAAAT TTATAAATTTAAAGAATTTA AAGA CAAATTCTTTAAATTTATAA CTCCAAAGAAATGCC TERM 909 505300 - 505329 + T 79 -8.2 -3.91897 | opp_overlap 505300 505293 505292 505285 505309 TCTGAAATTTATAAA TTTAAAGAATTT AAAGAC AAATTCTTTAAA TTTATAACTCCAAAG TERM 910 505329 - 505300 - T 84 -8.9 -4.02132 | opp_overlap 505300, overlap 505293 505292 505285 505309 TCTGAAATTTATAAA TTTAAAGAATTTA AAGA CAAATTCTTTAAA TTTATAACTCCAAAG TERM 911 505517 - 505505 - T 79 -6.3 -4.87318 | opp_overlap 505504 505505, overlap 505506 GGCAAAAGGCAAAAA TCTCT CCA AGAGA GGCTTGCTTGAAAAC TERM 912 505518 - 505506 - T 70 -7.7 -3.51307 | opp_overlap 505505 505504, overlap 505505 GCAAAAGGCAAAAAT CTCTC CAA GAGAG GCTTGCTTGAAAACG TERM 913 506148 - 506170 + T 71 -4.8 -4.73635 | opp_overlap 506150, overlap 506149 506150 ATCACTAATAAAAAA AAGCCGATTT TCA AAATCGGCAA TTTTATTAAATTGTA TERM 914 506149 - 506169 + T 75 -8.3 -3.43097 | opp_overlap 506150, overlap 506148 506150 TCACTAATAAAAAAA AGCCGATTT TCA AAATCGGCA ATTTTATTAAATTGT TERM 915 506168 - 506150 - T 100 -11.8 -6.13503 | opp_overlap 506150 506149 506148 CACTAATAAAAAAAA GCCGATTT TCA AAATCGGC AATTTTATTAAATTG TERM 916 506150 - 506168 + T 87 -11.8 -2.64773 | opp_overlap 506150, overlap 506149 506148 CACTAATAAAAAAAA GCCGATTT TCA AAATCGGC AATTTTATTAAATTG TERM 917 506272 - 506261 - T 82 -4.4 -5.79595 | opp_overlap 506249 506261 TTGCAAAATAAAAAA TCCA ATAA TGGA TTTAATATTTGGTTT deoC 506945 - 506274 - | deoxyribose-phosphate aldolase deoA 508243 - 506945 - | pyrimidine-nucleoside phosphorylase TERM 918 507051 - 507071 + g 71 -4.1 -5.08011 | opp_overlap 507051 507068, overlap 507068 ATTACATTAGATGAA TGAAGTT TGAAAAT AACTTCA TTTTTTGAAACTTTT TERM 919 507315 - 507344 + g 73 -8.9 -2.54459 | opp_overlap 507321, overlap 507314 507317 507320 TATCTAACAAGCTCG TAGAATTTATTTA AAGC TAAATAAGTTCTA ATTGATAGTGCTATT TERM 920 507663 - 507679 + g 80 -5.2 -5.22794 | opp_overlap 507661 507663 TCAAGCAGAATAATA TTAGCT CCTGT AGCTAA TTTTTTACTCATTAT TERM 921 507952 - 507934 - G 72 -7.4 -4.0641 | overlap 507935 GCTTAGGCATATAAA CTCCTAGC GAA GCTAGGAT AGGAACTACGGCTAG TERM 922 507951 - 507935 - G 88 -10.9 -3.03525 | overlap 507934 CTTAGGCATATAAAC TCCTAGC GAA GCTAGGA TAGGAACTACGGCTA deoD 508943 - 508245 - | purine-nucleoside phosphorylase fpg 509040 - 509885 + | foramidopyrimidine DNA gycosylase TERM 923 510085 - 510101 + G 80 -8.1 -4.09923 | opp_overlap 510081 510078 510088, overlap 510088 AATGAAAATACTGAT GAATCAA ATA TTGATTC TTCTTTACTTGAATT MS53_0449 509890 - 510417 + | hypothetical protein MS53_0450 512065 - 510803 - | hypothetical protein MS53_0451 512396 - 512067 - | hypothetical protein TERM 924 512463 - 512475 + H 83 -4.9 -5.47846 | opp_overlap 512452 512463 AATATAATTAAGAAA TTACT GTA AGTAA TTTTCTTTTTTACTT glyS 512519 - 513874 + | glycyl-tRNA synthetase TERM 925 515679 - 515660 - g 70 -6.4 -4.10958 | TTACAAAACATCAAA TCACTAGC AGAA GCTTGTGA AAGTGATGAAAAATA dnaG 513881 - 515722 + | DNA primase TERM 926 516200 - 516175 - f 100 -14.1 -4.84642 | GCTAAATCAACAAAA GCAGCTACTAC TAAA GCAGTAGCTGC TAAAAAAGTAGAAGT TERM 927 516272 - 516262 - f 86 -6.8 -5.00616 | CCTGCTGTTAAAAAA GCTG CAC CAGC TGCTAAAGCTAAAGT TERM 928 517703 - 517690 - g 76 -3.9 -5.54079 | opp_overlap 517690 GGAAAAAGCAAAAAA TATGA TGCA TCATA TATTAGATACATTAG rpoD 516646 - 518118 + | RNA polymerase sigma factor MS53_0456 518123 - 518890 + | hypothetical protein TERM 929 518878 - 518927 + F 100 -9.7 -5.03314 | opp_overlap 518868 518881 518886 518895, overlap 518886 518895 AATAAGCCTGCCATA CAAGCTAATATAAAAAATTTGCA ACAA TGCAAATTTTTTATATTCAATTG TTTTTTAGACGTAAA TERM 930 518924 - 518881 - f 74 -7.8 -3.48772 | opp_overlap 518878 518886 518895, overlap 518868 518886 518895 AAGCCTGCCATACAA GCTAATATAAAAAATTTGCA ACAA TGCAAATTTTTTATATTCAA TTGTTTTTTAGACGT TERM 931 518919 - 518886 - f 100 -14.3 -3.26449 | opp_overlap 518878 518886 518895, overlap 518881 518895 TGCCATACAAGCTAA TATAAAAAATTTGCA ACAA TGCAAATTTTTTATA TTCAATTGTTTTTTA TERM 932 518886 - 518919 + F 100 -14.3 -3.43246 | opp_overlap 518886 518881 518895, overlap 518878 518895 TGCCATACAAGCTAA TATAAAAAATTTGCA ACAA TGCAAATTTTTTATA TTCAATTGTTTTTTA TERM 933 518910 - 518895 - f 100 -6.2 -5.48063 | opp_overlap 518886 518878 518895, overlap 518886 518881 AGCTAATATAAAAAA TTTGCA ACAA TGCAAA TTTTTTATATTCAAT TERM 934 518895 - 518910 + F 100 -6.2 -5.48063 | opp_overlap 518895 518886 518881, overlap 518886 518878 AGCTAATATAAAAAA TTTGCA ACAA TGCAAA TTTTTTATATTCAAT MS53_0457 518942 - 519187 + | hypothetical protein TERM 935 520023 - 520043 + G 70 -5.5 -4.46215 | overlap 520020 TAACTATTTCTTTAG GTGGAAATG ATT TATTTTCAC TTGTTTTTGAATCTC TERM 936 520955 - 520933 - g 75 -7.2 -4.08692 | opp_overlap 520924 520947, overlap 520947 TAATGGTGTTCAAAA CATTTTAAAT AAC ATTCAAAATG AACTTGATGAATTAG TERM 937 521779 - 521763 - g 71 -4.5 -4.8743 | opp_overlap 521774, overlap 521765 521774 CCGAAAATAAAGAAA CACTAAA AAC TTTAGTA GCTAATTTAGTTAAC TERM 938 521936 - 521922 - g 71 -7.2 -3.86944 | overlap 521917 CTGATAACGATCAAA CTAAGA AAA TCTTAG TTCAAGTAGTTAGCG MS53_0458 519347 - 523228 + | hypothetical protein TERM 939 525358 - 525340 - g 76 -6.8 -4.55887 | opp_overlap 525340 525338 CCTTAAAAACACAAA GTCTTAAC TTA GTTAAAAC TCTTTTAAGTAATGC TERM 940 528712 - 528699 - g 70 -5.3 -4.55798 | opp_overlap 528694, overlap 528694 GATCCTAAACTAAAA CCTTT ATTT AAAGG AATTAACGATAAAAA MS53_0459 523242 - 531098 + | hypothetical protein TERM 941 531131 - 531112 - f 100 -9.4 -5.13016 | opp_overlap 531112 AATTAAAACCAAAAA CAAAAGCA AAAA TGCTTTTG TTTTTTTGTCTTTGT TERM 942 531112 - 531131 + F 100 -9.4 -5.90231 | opp_overlap 531112 AATTAAAACCAAAAA CAAAAGCA AAAA TGCTTTTG TTTTTTTGTCTTTGT TERM 943 531241 - 531213 - f 100 -9.7 -5.87996 | opp_overlap 531213 TAATGAAGAAAAAAA CGAATACACCT ATAAATA AGGCGTATTCG TTTTTTGCGCTTTTA TERM 944 531213 - 531241 + F 93 -7.5 -5.15117 | opp_overlap 531213 TAATGAAGAAAAAAA CGAATACACCT ATAAATA AGGCGTATTCG TTTTTTGCGCTTTTA TERM 945 531608 - 531588 - f 90 -11.9 -3.47227 | opp_overlap 531591, overlap 531591 GCTCAACGATTAGAA CAACCGGCT CAT AACCGGTTG GTTACAGGTTCGAAT TERM 946 531605 - 531591 - f 79 -7.8 -3.86935 | opp_overlap 531591, overlap 531588 CAACGATTAGAACAA CCGGCT CAT AACCGG TTGGTTACAGGTTCG TERM 947 532018 - 532034 + F 100 -9.5 -6.25741 | opp_overlap 532018, overlap 532008 CATCTCAAAGTATAA CTTCGTT TCA AACGAAG TTTTTTTTATTATTT TERM 948 532034 - 532018 - f 82 -9.5 -3.60865 | opp_overlap 532008 532018 CATCTCAAAGTATAA CTTCGTT TCA AACGAAG TTTTTTTTATTATTT TERM 949 532215 - 532226 + G 73 -3 -5.42605 | AGCTTTAGCTAGAGG TTTG CAAG CAAA TTTTGTTTTTGTTGA ldh 532144 - 533115 + | L-lactate dehydrogenase TERM 950 533110 - 533130 + T 100 -7 -6.17669 | ATTGATATGGATTTT GAATAAGT ATTAA ACTTATTC TTTTTTTATTTTATT TERM 951 533199 - 533157 - T 95 -9.5 -4.57073 | opp_overlap 533147 533158 533160 533163 533171, overlap 533160 533171 TATTTTTGTGAAAAA CAATAATTAAAAAACTGCT TATAC AGCAGTTTTTTAATTATAT TATTCGAAAGAAACA TERM 952 533158 - 533198 + T 100 -13 -3.61398 | opp_overlap 533157 533160 533171, overlap 533147 533160 533163 533171 ATTTTTGTGAAAAAC AATAATTAAAAAACTGCT TATAC AGCAGTTTTTTAATTATA TTATTCGAAAGAAAC TERM 953 533160 - 533196 + T 100 -15.6 -3.38812 | opp_overlap 533160 533157 533171, overlap 533158 533163 533171 TTTTGTGAAAAACAA TAATTAAAAAACTGCT TATAC AGCAGTTTTTTAATTA TATTATTCGAAAGAA TERM 954 533196 - 533160 - T 100 -15.6 -4.40561 | opp_overlap 533158 533160 533163 533171, overlap 533157 533171 TTTTGTGAAAAACAA TAATTAAAAAACTGCT TATAC AGCAGTTTTTTAATTA TATTATTCGAAAGAA TERM 955 533163 - 533193 + T 100 -12.9 -3.83318 | opp_overlap 533160 533157 533171, overlap 533160 533158 533171 TGTGAAAAACAATAA TTAAAAAACTGCT TATAC AGCAGTTTTTTAA TTATATTATTCGAAA TERM 956 533171 - 533185 + T 88 -5.7 -5.3671 | opp_overlap 533171 533160 533157, overlap 533163 533160 533158 ACAATAATTAAAAAA CTGCT TATAC AGCAG TTTTTTAATTATATT TERM 957 533185 - 533171 - T 88 -5.7 -5.39221 | opp_overlap 533163 533160 533158 533171, overlap 533160 533157 ACAATAATTAAAAAA CTGCT TATAC AGCAG TTTTTTAATTATATT MS53_0462 535343 - 533199 - | hypothetical protein TERM 958 534760 - 534740 - G 78 -9.9 -2.71791 | overlap 534739 ATTGTTTTGGTAAAT CTTTAGTTA AAT TAACTAAAG TAGACACTGCAGTTT TERM 959 535269 - 535239 - G 70 -8.4 -2.72364 | overlap 535238 ATTATCAATTATAAC TTTAGCCGTTACTG CTC CAGCAACACCTAAA ATACTAATAGCACCA MS53_0463 537675 - 535351 - | hypothetical protein TERM 960 536177 - 536199 + g 73 -7.8 -3.786 | opp_overlap 536183, overlap 536180 536192 CAATTTGCATAATTT GAAGTAGCTA TTT TAGCTAATTC TTTGGCATTTTCTAC TERM 961 537275 - 537285 + g 71 -4.6 -4.93968 | opp_overlap 537251, overlap 537250 TAATCAGGTTGATTT GCTG CTG CGGC TTTTTGATTATAAGT TERM 962 537754 - 537770 + r 78 -6.7 -4.59069 | CATAATACTCCTTAA GAAAATT AAA AATTTTC TTTTATAATTATAAT TERM 963 537882 - 537907 + r 75 -4.2 -5.2696 | ATATTTTCTATATAG TAAAAAGTTC TAAAAT GAATTTTTTA TTTTTTAAATTTTAA atpD-3 539270 - 537912 - | F0F1 ATP synthase subunit beta TERM 964 538175 - 538193 + g 70 -6.2 -4.14397 | CATCTTCGATTTCTT TATATTTT TGC AAAATATA TTTAGTTTCTAAAAT TERM 965 538735 - 538715 - G 70 -6.9 -4.04209 | TTAAATCATTATAAA GTTCAATAG CTT CTCTTGAAC GTTCACCAGAACCTA atpA-3 540814 - 539270 - | F0F1 ATP synthase subunit alpha TERM 966 540709 - 540733 + g 76 -8.1 -3.88331 | opp_overlap 540708 CCATTAAAATAGCAT CTTTATTATTT GCT AAATGATAAAG TTCATTTTGTTTAAA MS53_0466 542807 - 540804 - | hypothetical protein TERM 967 541421 - 541434 + g 74 -2.5 -5.63374 | overlap 541412 TTTCATTATTAGCTT TAATA GTTG TATTA TTTTTTTGATCTTGA TERM 968 541618 - 541640 + g 70 -7.8 -3.45602 | opp_overlap 541621, overlap 541619 541621 541635 ATCATTTGATTTATT ACATTAGAAG CAA CTTCTAATGA TTGTACATATTTACT TERM 969 541619 - 541639 + g 87 -11.3 -2.66638 | opp_overlap 541621, overlap 541618 541621 541635 TCATTTGATTTATTA CATTAGAAG CAA CTTCTAATG ATTGTACATATTTAC MS53_0467 543256 - 542798 - | hypothetical protein MS53_0468 544140 - 543256 - | hypothetical protein TERM 970 543308 - 543324 + g 74 -3.8 -5.28983 | opp_overlap 543308 TTCTTAGATAAAATA GAAATT TCTTC AATTTC TTTTTCTCTTTTAGC MS53_0469 544621 - 544133 - | hypothetical protein MS53_0470 546083 - 544632 - | hypothetical protein TERM 971 544690 - 544735 + g 86 -10.3 -3.18681 | gap 1, opp_overlap 544702 544705 544709 TTCTTAATGTTTTCT TTATTTATGATATTATTAACTA TTT TAGTTAA-AATAGCATAAATAA TTGGTGAAATTACCA MS53_0471 548241 - 546076 - | hypothetical protein TERM 972 548188 - 548158 - G 70 -8.4 -2.72364 | overlap 548157 ATTATCAATTATAAC TTTAGCCGTTACTG CTC CAGCAACACCTAAA ATACTAATAGCACCA MS53_0472 548737 - 548270 - | hypothetical protein TERM 973 549567 - 549547 - R 100 -10.5 -5.47914 | opp_overlap 549546 AAAAAGTATAAAAAA GAGCTTCCA ACT TGGAAACTC AGGTTTTAATTTTTA TERM 974 549651 - 549604 - R 77 -8.3 -3.65351 | gap 1, opp_overlap 549599 549617 549644, overlap 549615 549617 TTATTTCTAGTCAAA TATATTAAAAACACACATTTTA GTTTT TAAAATGCGTATTTTTAATA-A TTTAAATATTTAATT TERM 975 549641 - 549615 - R 74 -5.3 -4.90217 | opp_overlap 549599 549617, overlap 549604 549617 CAAATATATTAAAAA CACACATTTTA GTTTT TAAAATGCGTA TTTTTAATAATTTAA MS53_0474 554504 - 549756 - | hypothetical protein TERM 976 550187 - 550199 + g 70 -4.9 -4.65263 | TTATTAAACGATTAG TTGAA AAA TTCAA TTTATTTTCAAAACT TERM 977 551012 - 551028 + g 71 -4.5 -4.89393 | CTCCAAAATTTTGAT TAAAGTA AAT TGCTTTA TTTTTATCGAATTTA TERM 978 551756 - 551778 + g 72 -7.2 -4.04071 | TTCAATTGTTATAGC TTATTTCAGT TAA ATTGAAATAA TTATTATTAATATTT TERM 979 553925 - 553913 - G 72 -4.9 -4.84017 | AATTTTCTATAAAAA TTTGA TAT TCAAA ACTTATACTATTTGT TERM 980 554807 - 554835 + r 86 -7.5 -4.7416 | opp_overlap 554807 TAATGAAGAAAAAAA CGAATACACCT ATAAATA AGGCGTATTCG TTTTTGCGCTTTTAA TERM 981 554835 - 554807 - R 100 -9.7 -5.87996 | opp_overlap 554807 TAATGAAGAAAAAAA CGAATACACCT ATAAATA AGGCGTATTCG TTTTTGCGCTTTTAA MS53_0475 556237 - 554852 - | putative transposase,ISMHp1-like TERM 982 555545 - 555529 - G 74 -8.1 -3.59979 | opp_overlap 555528 555531 TGTTTTTAGCTCAAA TAGATTC GAC GAATCTA GATTTAGTAAAATAC TERM 983 555570 - 555587 + g 71 -7.1 -3.85092 | overlap 555585 555586 AAATACTTATTTTCT TGAACAA AGCC TTGTTCA TTTACTATAAATGCT MS53_0476 556539 - 556249 - | hypothetical protein TERM 984 556593 - 556566 - R 72 -3 -5.43514 | gap 1, overlap 556567 556568 556570 AAAATAATTAAAAAA TGTACTTATATAC TAT GTATATAAATA-A TAAGGTAAAAGGTAT TERM 985 556635 - 556615 - R 100 -10.5 -5.35222 | AAAAGGTATAAAAAA GAGCTTCCA ACT TGGAAACTC GGGTTAAAAAAACGA TERM 986 556655 - 556680 + r 78 -9.9 -2.61158 | opp_overlap 556655 556662, overlap 556654 556662 TAAAAAAACGAAAAA TAAAAAAGCCA ATAA TGGCTTTTTTG AATTATTTTTGTTGG TERM 987 556680 - 556655 - R 95 -7.7 -5.31158 | opp_overlap 556655 556654 556662, overlap 556662 TAAAAAAACGAAAAA TAAAAAAGCCA ATAA TGGCTTTTTTG AATTATTTTTGTTGG TERM 988 556673 - 556662 - R 100 -5.8 -5.95286 | opp_overlap 556655 556654 556662, overlap 556655 ACGAAAAATAAAAAA GCCA ATAA TGGC TTTTTTGAATTATTT TERM 989 556662 - 556673 + r 84 -5.8 -5.23016 | opp_overlap 556662 556655, overlap 556655 556654 ACGAAAAATAAAAAA GCCA ATAA TGGC TTTTTTGAATTATTT rpmE 556898 - 556683 - | 50S ribosomal protein L31 rpsD 557505 - 556906 - | 30S ribosomal protein S4 MS53_0479 557712 - 558443 + | hypothetical protein TERM 990 558562 - 558552 - g 77 -5.4 -5.08824 | opp_overlap 558552 TGTTGAGCTAAAAAA TGCA TAT TGCA GTATTTATAAAGATG smpB 558424 - 558855 + | SsrA-binding protein TERM 991 559257 - 559297 + T 88 -10.1 -3.95677 | opp_overlap 559266 TATGTTTTTCACCAA TAAAAAAAATTATGCCCTT TCA AAAAGCATAATTTTTTTTA TTGGTTTTTTCGCTT TERM 992 559288 - 559266 - T 100 -6.4 -6.13503 | opp_overlap 559257 CACCAATAAAAAAAA TTATGCCCTT TCA AAAAGCATAA TTTTTTTTATTGGTT MS53_0481 560782 - 559295 - | hypothetical protein TERM 993 559424 - 559400 - G 90 -8.7 -4.73094 | opp_overlap 559400 AATAGTAAGAGAAAA TCATAATCAAG GCG CTAGATTATGA TTAGTAAAATCTTCT TERM 994 559400 - 559424 + g 74 -8.7 -3.19003 | opp_overlap 559400 AATAGTAAGAGAAAA TCATAATCAAG GCG CTAGATTATGA TTAGTAAAATCTTCT TERM 995 559505 - 559515 + g 80 -5.4 -5.35459 | opp_overlap 559505 TCAAATAAAACCAAA TTGC ATT GCAA TTTTTTCTGATGTAT TERM 996 560826 - 560797 - R 90 -7.4 -4.95758 | opp_overlap 560797 560804, overlap 560804 ATTATACTATAAAAA TAAAAAAGACTT TTTTAT AAGTCTTCTTTA TAGCTTTAATTATTT TERM 997 560819 - 560804 - R 82 -3.3 -5.98675 | opp_overlap 560797 560804, overlap 560797 TATAAAAATAAAAAA GACTT TTTTAT AAGTC TTCTTTATAGCTTTA MS53_0482 562304 - 560832 - | putative amino acid permease TERM 998 561041 - 561055 + g 81 -2.9 -5.80817 | TTTTTTCTCAAAGTG GAATT TTAGT AATTC TTTTTTTATGTTCAA TERM 999 561126 - 561114 - G 77 -6.3 -4.74132 | opp_overlap 561114 561113 ATATTGCACTAAAAA TGGAA TGG TTCCA ATGTTTACTACTTGT TERM 1000 561167 - 561148 - G 76 -8 -3.87075 | ACTACTTGTGATAAA TATGAAGA TGGC TCTTCATA ACCGTTAGCTTTTAA TERM 1001 562275 - 562260 - G 82 -6.2 -5.0538 | GTTTATTGTAAAAAA TGCAAA ATAT TTTGCA GATAAATATTTTTTG pgiB 563605 - 562313 - | glucose-6-phosphate isomerase TERM 1002 562722 - 562732 + g 74 -6.8 -4.323 | AATATCGCTGATGAT GGTC AAA GACC TTTTCCGTCTTTACC TERM 1003 563636 - 563653 + r 78 -2.7 -5.88061 | opp_overlap 563636 AAAAAATAAAAAAAA TAGCCAT TAAA ATAGCTA TTTTTTTCGTTTTTT TERM 1004 563653 - 563636 - R 100 -4.9 -6.47325 | opp_overlap 563636 AAAAAATAAAAAAAA TAGCCAT TAAA ATAGCTA TTTTTTTCGTTTTTT rpoC 568159 - 563681 - | DNA-directed RNA polymerase subunit beta' TERM 1005 563923 - 563945 + g 70 -7.8 -3.34895 | CTTTAAGGTTATATT TTCCATTTTC TTC GAAATTGGAA TTAGTTCCGGCTGGA TERM 1006 566348 - 566369 + g 77 -3.1 -5.64006 | gap 1, opp_overlap 566348 CATCATTTCGTTAAA TGAAGGATAG AAT TTA-CCTTCA TTTTTTTGGTTAGCT TERM 1007 567853 - 567876 + g 75 -5.4 -4.90917 | TATGACCCATCCTGC TTCTTCTTGA AATT TTAGGAAGAA TTTTTGGTTGAATTT rpoB 571763 - 568152 - | DNA-directed RNA polymerase subunit beta TERM 1008 568628 - 568649 + g 74 -8.1 -3.69408 | opp_overlap 568628 TTCCTGATTTATCAA GATTTGCTT CTTG AAGCAGATC TTCTATGGTTTCTTT TERM 1009 569928 - 569949 + g 73 -8.1 -3.48668 | ACCGATTTCTTCGTA TGATGTTAG ATAT CTAACGTCA TTGTAATCTACTACT TERM 1010 571441 - 571462 + g 74 -2.4 -5.58209 | TTTTTAAGTGTTATA TAAACTTT CATGCT AAAGTTTG TTTTTTTAGCTTTAC TERM 1011 571813 - 571803 - R 74 -2.6 -5.76237 | opp_overlap 571803 GATATAAATAAAAAA TTTT GCC AAAA TATATAAAATTTATA TERM 1012 571878 - 571865 - R 71 -2.5 -5.47159 | overlap 571858 571872 571873 TTTTAACATAAAAAA TAAAA AATT TTTTA CAAAAAATACAAAAA TERM 1013 571884 - 571872 - R 86 -3.5 -6.07374 | overlap 571858 571865 571873 ATAAAAAATAAAAAA TTTTT TAC AAAAA ATACAAAAAAATTAA TERM 1014 571923 - 571896 - R 100 -7.3 -5.9667 | AAAAATACAAAAAAA TTAAAATTGAA AAATAA TTCAATTTTAA GAGAATTTTTTGTTT tpiA 572668 - 571937 - | triosephosphate isomerase TERM 1015 572313 - 572323 + g 88 -5.4 -5.67283 | opp_overlap 572313 AAATTTTTCTCTAAA GCAA GTC TTGC TTTTTTATTTACGTT TERM 1016 572532 - 572548 + g 71 -4.4 -4.93968 | TTTGTAAAAGGTGTT GCTACT GCAAA GGTAGC TTTTTGATTGTAAGT TERM 1017 572736 - 572722 - H 78 -2.8 -5.9003 | opp_overlap 572722 AAATTAAGAAAAAAA TTAGGA ATT TCCAAA TTATGTGCAAATTTT TERM 1018 573200 - 573182 - g 100 -6.8 -6.01725 | AAGAAAAATAAAAAA TCTCTTCA TTT TAAAGAGA TTAAAGAAAATTCTA recU 572774 - 573262 + | Holliday junction-specific endonuclease himA 573538 - 573263 - | nucleoid DNA-binding protein TERM 1019 574360 - 574336 - g 71 -8.7 -2.91772 | overlap 574335 AAGTTGGTGATAAAT TCATGTTTATG TCA CGTAAACATGA TGAAAGTAATACTTA TERM 1020 574842 - 574822 - g 71 -7.7 -3.6288 | AAACCAATGGTGAAA TTGAATTTG TAT CAAATCCAA CAATGATGCCAGATA lepA 573675 - 575492 + | GTP-binding protein LepA MS53_0490 575894 - 575493 - | hypothetical protein TERM 1021 575579 - 575604 + g 82 -5.5 -5.46698 | opp_overlap 575579, overlap 575585 CACCGTAAAATCTAA CAATAACAATC AATA GGTTGTTTTTG TTTTTTAATTTTAAA TERM 1022 575585 - 575598 + g 81 -3.1 -5.77571 | opp_overlap 575579, overlap 575579 AAAATCTAACAATAA CAATC AATA GGTTG TTTTTGTTTTTTAAT TERM 1023 575993 - 575980 - g 76 -8.1 -3.75762 | opp_overlap 575980 575979 TGAACTAAAAGAAGA CGCCA AAGC TGGCG ATTATTTTATTTTAA TERM 1024 575980 - 575993 + G 73 -8.1 -3.36251 | opp_overlap 575980, overlap 575979 TGAACTAAAAGAAGA CGCCA AAGC TGGCG ATTATTTTATTTTAA MS53_0491 575957 - 577573 + | hypothetical protein TERM 1025 577602 - 577576 - T 77 -9.6 -2.99958 | opp_overlap 577584, overlap 577584 CCAAGAAGAGTAAAT TTAAAAAATGCC ATT GGCATTTTTTTA GTAAGCTCTCGCAAA TERM 1026 577584 - 577594 + T 100 -6.8 -5.52986 | opp_overlap 577576 577584 AGTAAATTTAAAAAA TGCC ATT GGCA TTTTTTTAGTAAGCT TERM 1027 577594 - 577584 - T 90 -6.8 -5.22943 | opp_overlap 577584, overlap 577576 AGTAAATTTAAAAAA TGCC ATT GGCA TTTTTTTAGTAAGCT proS 579048 - 577600 - | prolyl-tRNA synthetase TERM 1028 578734 - 578745 + g 77 -3 -5.68438 | opp_overlap 578734 AGGTCTAACGATTAA CTTT TCTG AAAG TTTTTTGTTTCCTAC TERM 1029 579099 - 579085 - H 100 -8.6 -6.01725 | AATAAAAATAAAAAA TCACCT TAA AGGTGA TATGGCTGCCTCAGT TERM 1030 579314 - 579324 + H 74 -2.6 -5.66868 | AAAAATTAAATTACT TTTT TTT AAAA TTTTTTTGGTTAATT TERM 1031 579643 - 579668 + H 78 -2.7 -5.93809 | opp_overlap 579643 579645, overlap 579645 CTTAAAATTTTTAAA CATTATTTTCT TTAC AGAAAGTAATA TTTTTTTTATAACAA TERM 1032 579645 - 579666 + H 70 -5.3 -4.62054 | opp_overlap 579645 579643, overlap 579643 TAAAATTTTTAAACA TTATTTTCT TTAC AGAAAGTAA TATTTTTTTTATAAC TERM 1033 579907 - 579882 - g 100 -7 -5.86465 | opp_overlap 579882 AATAATAGAAAAAAA CCAATTTACC GAAGAA GATAAATTGG CTTTTAAAAAACAAA MS53_0493 579712 - 580014 + | hypothetical protein pgsA 580763 - 580011 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1034 580401 - 580422 + g 86 -6 -5.41746 | opp_overlap 580401 TTTTATTTTTCCAAA TATAGAAG CCGATA CTTCTATA TTTTTTTGCGCCATT MS53_0495 581316 - 580768 - | hypothetical protein TERM 1035 580845 - 580865 + g 95 -11.3 -4.07651 | opp_overlap 580857, overlap 580857 TTTCTCTTTCTTCTT CTTCAGTTA AAG TAACTGAAG TTAATTTTTTTAGTT MS53_0496 581671 - 581324 - | hypothetical protein mgtE 583122 - 581701 - | Mg2+ transport protein TERM 1036 582891 - 582920 + g 76 -8 -3.87583 | CTTGCAAAATTTTCA TCGCTCAATCTT CACTAA AAGATTTAGCGA TTTCAATTTGAGTTT TERM 1037 583037 - 583019 - G 80 -5.3 -5.27335 | opp_overlap 583019 TCTTGTAAAGAAAAA TCGCTAA TTAAT TCAGCGA TATCTGCAATTGGAT MS53_0498 583789 - 583133 - | hypothetical protein TERM 1038 583663 - 583640 - G 93 -9.8 -4.56597 | overlap 583661 TTTTTTGTTGAAAAA GTCTTTAAAA TTAT TTTTAAAGAC AATTAAAATAATTGC MS53_0499 584132 - 583791 - | hypothetical protein TERM 1039 584061 - 584079 + g 74 -6.2 -4.45175 | AGTTTTTGCTGCTGT TAATTTTT TTC AAAAATTA TTTACTTTTTTCATA TERM 1040 585233 - 585220 - g 72 -6.7 -4.15748 | overlap 585218 CTACGCTAAAAAATA CTTCG GTAG CGAAG CTAAAAAAGATATTG TERM 1041 585784 - 585762 - g 71 -4.2 -5.11937 | opp_overlap 585762, overlap 585766 AAGAATTTGAAAAAA GAACTCAA AAAGCAA TTGAGCTC TTCGATGGATACCAA pepO 584228 - 586120 + | endopeptidase O TERM 1042 586692 - 586673 - g 72 -5 -4.87665 | CCTGATTCAGAAAAA GAAGCAAA TTAC TATGCTTC TAAAATAATTTACTA MS53_0501 586202 - 587230 + | hypothetical protein TERM 1043 587960 - 587948 - g 70 -4.9 -4.67109 | opp_overlap 587949, overlap 587949 CAAAAGAAAAAAAGA GTATT TAG AATAC CTTCAAAATAATTCT TERM 1044 589027 - 588999 - g 75 -3.3 -5.42605 | TTAATAAAAACAAAA TTTTTAACTTC TTATATT GAAGGTAAAAA AATAATCTTTATAGA MS53_0502 587295 - 589646 + | hypothetical protein TERM 1045 589678 - 589642 - f 83 -11.1 -2.52061 | opp_overlap 589642 589652, overlap 589652 AACTAGAAAATAATT CATAAAAAAATAAGGCA AAT TGCCTTATTTTTTGGTG TCTATACATATGGCG TERM 1046 589642 - 589678 + F 100 -13.3 -2.93382 | opp_overlap 589642 589652, overlap 589652 AACTAGAAAATAATT CATAAAAAAATAAGGCA AAT TGCCTTATTTTTTGGTG TCTATACATATGGCG TERM 1047 589668 - 589652 - f 100 -9.5 -5.66684 | opp_overlap 589642 589652, overlap 589642 TAATTCATAAAAAAA TAAGGCA AAT TGCCTTA TTTTTTGGTGTCTAT TERM 1048 589652 - 589668 + F 100 -9.5 -5.25893 | opp_overlap 589652 589642, overlap 589642 TAATTCATAAAAAAA TAAGGCA AAT TGCCTTA TTTTTTGGTGTCTAT TERM 1049 589908 - 589890 - g 80 -9 -3.67775 | ATTTCCATCTAAGAA TTTAACAG AAA CTGTTAAA AAAAGGTGCCAATTA TERM 1050 589925 - 589951 + G 78 -9 -3.21416 | opp_overlap 589930 589933, overlap 589933 AAAGGTGCCAATTAT TAAAAGAAGAAA ATG TTTCTTTTTTTA TTAATACTGGAAATC TERM 1051 589933 - 589943 + G 84 -4 -5.84381 | opp_overlap 589933 589930, overlap 589925 CAATTATTAAAAGAA GAAA ATG TTTC TTTTTTTATTAATAC TERM 1052 590000 - 589990 - g 76 -4 -5.50313 | GATAAAATTAAAAAA TTAG CAA CTAA ATTAAACTCAAGATA MS53_0503 589822 - 590646 + | hypothetical protein TERM 1053 590797 - 590781 - g 70 -2.3 -5.5604 | opp_overlap 590782, overlap 590782 TCAATTAATAAAAAA TTTTCTA CTT TAGAAAT TTTATTAATGAGATC TERM 1054 590782 - 590796 + G 75 -5.8 -4.71828 | opp_overlap 590781 590782 CAATTAATAAAAAAT TTTCTA CTT TAGAAA TTTTATTAATGAGAT TERM 1055 591769 - 591755 - g 70 -5.8 -4.26559 | opp_overlap 591754 TAATGAAAATAATAA TTTTGA TTT TCAAAA ATCAATTAAAATTTT TERM 1056 591897 - 591883 - g 84 -5.8 -5.28281 | ACAAAACAAATAAAA TTTTAG AAA CTAAAA AAGAAATAGACGATA MS53_0504 590736 - 592163 + | hypothetical protein TERM 1057 592557 - 592534 - g 82 -6.2 -5.14563 | CTTTGTATTAAAAAA TTCACATTTA AAAG TAAATGTAAA AAATCCAGATCAAAT TERM 1058 592645 - 592627 - g 72 -6.1 -4.42976 | opp_overlap 592641 TGATAAATCAATAAA TGGAATT GGTGG AATTCCA GTTGGAATTTCAGGA thiI 592154 - 593296 + | thiamine biosynthesis protein TERM 1059 593307 - 593277 - T 76 -6.5 -4.61566 | gap 1, opp_overlap 593278 593285, overlap 593278 593285 TTTTAAATCAGAAAA TGAAAAAATTTGCT ATTT AGCAAATTTTTT-A TTTGTTGAATTGAGA TERM 1060 593307 - 593278 - T 72 -8.1 -3.36216 | opp_overlap 593278 593285, overlap 593277 593285 TTTAAATCAGAAAAT GAAAAAATTTGCT ATTT AGCAAATTTTTTA TTTGTTGAATTGAGA TERM 1061 593278 - 593307 + T 82 -8.1 -4.2528 | opp_overlap 593277 593278 593285, overlap 593285 TTTAAATCAGAAAAT GAAAAAATTTGCT ATTT AGCAAATTTTTTA TTTGTTGAATTGAGA TERM 1062 593285 - 593300 + T 100 -6.2 -5.80003 | opp_overlap 593277 593278 593285, overlap 593278 CAGAAAATGAAAAAA TTTGCT ATTT AGCAAA TTTTTTATTTGTTGA TERM 1063 593300 - 593285 - T 100 -6.2 -5.50313 | opp_overlap 593285 593278, overlap 593277 593278 CAGAAAATGAAAAAA TTTGCT ATTT AGCAAA TTTTTTATTTGTTGA MS53_0506 595092 - 593305 - | putative ABC transporter, ATP-binding protein MS53_0507 596957 - 595170 - | putative ABC transporter, ATP-binding protein TERM 1064 596161 - 596141 - G 72 -6.9 -4.22749 | overlap 596138 AAACATAAACAATAA CGCTAATTA AAT TAATAAGCG CGAAAAATACAGGAG TERM 1065 596293 - 596320 + g 74 -9.2 -2.87541 | opp_overlap 596300, overlap 596300 TTTATAAATCTAATT CCAGAAACGCTA TCAT TTGCGTTTTTGG TCATTGATTCTAAGT TERM 1066 597068 - 597089 + H 88 -5.9 -5.42265 | overlap 597070 GTAATGACAATTTTA CGCACAAAA AATA TTTTGTGAG TTTTTTCTGATTTAC TERM 1067 597703 - 597686 - g 71 -4.2 -5.08367 | AAGAGAAATGAAAAA TCTTGA TAAGCT TCAAGA AGAATACGAAAACGA potA 597228 - 598628 + | spermidine/putrescine ABC transporter ATP-binding protein potB 598669 - 599460 + | spermidine/putrescine ABC transporter permease protein PotB TERM 1068 599624 - 599613 - g 70 -5.8 -4.3255 | CTTTTAACCAAGAAA CTCC TAAA GGAG AATTCAATACCACTT potC 599498 - 600298 + | spermidine/putrescine transport system permease PotC MS53_0511 600295 - 602253 + | hypothetical protein TERM 1069 602320 - 602351 + F 100 -11.9 -5.7946 | opp_overlap 602317 602340 ACTTCCAAGTTACCA CTCTCAAAAAAAT ATTAAA ATTTTTTTGAGAG TTTTTTTATTAAAAA TERM 1070 602390 - 602405 + F 70 -7.6 -3.5332 | opp_overlap 602390, overlap 602386 AAAAAGAAAGAAAAA TGCTCT CAAG AGAGCA TTCATTTAAACCTTT TERM 1071 602405 - 602390 - f 100 -7.6 -5.63012 | opp_overlap 602386 602390 AAAAAGAAAGAAAAA TGCTCT CAAG AGAGCA TTCATTTAAACCTTT TERM 1072 603518 - 603501 - f 90 -5.7 -5.57396 | opp_overlap 603506 603507, overlap 603507 ATAACTAATAAAAAA TAAAAAG CCGA CTTTTTA AAAATCGGCAATTTT TERM 1073 603527 - 603507 - f 100 -10.5 -5.84011 | opp_overlap 603506 603507, overlap 603501 AATAAAAAATAAAAA GCCGACTTT TTA AAAATCGGC AATTTTATTAAATTG TERM 1074 603507 - 603527 + F 70 -8.3 -2.64773 | opp_overlap 603501 603507, overlap 603506 AATAAAAAATAAAAA GCCGACTTT TTA AAAATCGGC AATTTTATTAAATTG TERM 1075 604391 - 604369 - g 79 -9.4 -3.22091 | overlap 604385 AGTTGAAGCTATTAA TAAAAAAGTT AGA AACTTTTTTA TAAAAATTGAAAAAA TERM 1076 605122 - 605108 - g 73 -4.3 -5.17507 | AAAATCGAACAAAAA GGAAA CAACT TTTCC GGTGGTCAAAAACAA MS53_0513 603752 - 605443 + | putative ABC transporter, ATP-binding protein TERM 1077 605909 - 605929 + G 88 -9.7 -4.36063 | CAATGTTGACGTTAT GCGCCAGTT TTT AACTGGGGC TTTTCCTAATGTTAT TERM 1078 606177 - 606160 - g 70 -5.7 -4.34267 | opp_overlap 606159 TTAGAGAAGTTAAAA TTTTTTC ACAA GAAAAAA ATGTAATTCAAAATT TERM 1079 606195 - 606179 - g 77 -2.3 -5.88565 | overlap 606180 TTCACAAGAAAAAAA TGTAATT CAA AATTACC AAAAAATAAACACCG TERM 1080 606279 - 606289 + G 77 -5.4 -5.18643 | ATAGCAATTAATATC GCAA ACT TTGC TTTTATTTTAATTGC MS53_0514 605436 - 607382 + | putative ABC transporter, ATP-binding protein TERM 1081 607984 - 607973 - g 70 -5.8 -4.323 | TTCAAAGATTTAAAA CTGG AACT CCAG CTAGAATTTATAAAT TERM 1082 608107 - 608080 - g 82 -4.4 -5.69793 | gap 1, opp_overlap 608089, overlap 608086 608089 AGATCAAATAAAAAA TTAAACCAACAAG TAT CTTGTT-ATTTAA CTTATACTAATGAAA TERM 1083 609025 - 608998 - g 100 -6.4 -5.77571 | ATTAAAAAACAAAAA CAAGATGCTTCA AGAA TGAAAAATCTTG AAAAAATTAAAATTC gidA 607384 - 609213 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1084 609270 - 609284 + G 72 -3.6 -5.33866 | opp_overlap 609254, overlap 609254 TCTTTGATGAATATG CAAAGA GAA TTTTTG TTTTTTCTAAATTTA TERM 1085 609384 - 609356 - g 87 -4.7 -5.86609 | overlap 609361 GTAAAAAAAGAAAAA GAAACTCTAGAAA TTC TTTCTAAAATCCC AAAAAATTCAACAGT MS53_0516 609203 - 609637 + | hypothetical protein TERM 1086 609759 - 609744 - f 71 -4.8 -4.83677 | AAAATAAAATTAAAA GAAAAA TATT TTTTTC ATCCTTAATTGCAGC TERM 1087 611196 - 611182 - g 71 -7.2 -3.83375 | TGAAAACCAAGATAA GCAAAT TAA ATTTGC TAAAAACTCTCTTTT TERM 1088 611253 - 611243 - g 71 -4 -5.09521 | TTAACAAACGAAAAA GTTA CAG TAAC AAACGATGCAAATAA MS53_0517 609800 - 612121 + | putative lipoprotein TERM 1089 612161 - 612136 - T 75 -3.4 -5.56112 | opp_overlap 612141 ATAAAAACCAAAAAA GAAAAGTACT GTAAAA AGTACTTTTT GTTTTATCTTTTTTT TERM 1090 612141 - 612156 + T 75 -3.3 -5.60556 | opp_overlap 612136 AACCAAAAAAGAAAA GTACT GTAAAA AGTAC TTTTTGTTTTATCTT ktrA 612861 - 612175 - | putative potassium uptake protein KtrA ktrB 614516 - 612873 - | putative potassium uptake protein KtrB TERM 1091 614439 - 614423 - G 83 -6.7 -4.94811 | opp_overlap 614422 614425 CTAAAAATAAATAAA TAGTTTT ATT AAAACTA AGTTTATATCTATTA MS53_0520 615420 - 614560 - | hypothetical protein tdk 615477 - 616028 + | thymidine kinase TERM 1092 616452 - 616479 + G 76 -8.6 -3.57144 | gap 1 TAAGTTAGTTTTTGC TGGAGGAAC-ATG ACC TATAGTTCCTCCA TTTAAAGGTAAAGAC nox 616126 - 617487 + | NADH oxidase TERM 1093 617497 - 617518 + F 100 -11.7 -4.56597 | opp_overlap 617497 617502, overlap 617502 GCTTAATAATTCAAA TAAAAGCCC AACA GGGCTTTTA TTTTTAAAAGAGCGA TERM 1094 617518 - 617497 - f 100 -11.7 -3.85389 | opp_overlap 617497 617502, overlap 617502 GCTTAATAATTCAAA TAAAAGCCC AACA GGGCTTTTA TTTTTAAAAGAGCGA TERM 1095 617502 - 617513 + F 93 -7.2 -5.26119 | opp_overlap 617497 617502, overlap 617497 ATAATTCAAATAAAA GCCC AACA GGGC TTTTATTTTTAAAAG TERM 1096 617513 - 617502 - f 90 -7.2 -4.94962 | opp_overlap 617502 617497, overlap 617497 ATAATTCAAATAAAA GCCC AACA GGGC TTTTATTTTTAAAAG TERM 1097 619202 - 619185 - g 80 -8.5 -3.90766 | overlap 619180 TAGTTAGAAATACAA CTTTTGC AAGA GCAAAAG AAATCGCAAACCACG ptsI 617573 - 619279 + | phosphoenolpyruvate-protein phosphatase fmt 620098 - 619271 - | methionyl-tRNA formyltransferase TERM 1098 619334 - 619355 + g 85 -2.9 -5.95449 | overlap 619336 619342 AAAAATGTCGCCATC TACGCAAGT AAAA ACTGGCGCA TTTTTTATTTTATTT TERM 1099 619342 - 619362 + g 71 -4.1 -5.10933 | overlap 619336 619334 CGCCATCTACGCAAG TAAAAACTG GCG CATTTTTTA TTTTATTTTCGGTAG TERM 1100 619910 - 619920 + g 74 -4 -5.37345 | TTTAAGCTCTTCGTA TATC ATC GATA TTTTTTCTGGTTGAA MS53_0525 620997 - 620101 - | hypothetical protein TERM 1101 620738 - 620749 + g 74 -2.2 -5.61689 | TCAATTTTTCACTGA CGAG CAGC TTCG TTTTTTCTTACTTTT TERM 1102 620765 - 620785 + g 72 -6.3 -4.26076 | TTTTTTCTTACTTTT CAATAGAAT TTA ATTTTATTG TTTTCATCACGATAA TERM 1103 621061 - 621047 - R 100 -7.2 -6.32976 | opp_overlap 621047 621046 AAAAAAATAAAAAAA TCAAGT TAG ACTTGA AATTTTTAAACTGCT MS53_0526 622095 - 621067 - | hypothetical protein TERM 1104 621329 - 621341 + g 77 -4.9 -5.2853 | opp_overlap 621321 TTAAAAATTTGACTT TTTCA AAA TGAAA TTTTATTTTTAAGTA TERM 1105 621849 - 621863 + g 71 -2.8 -5.38321 | opp_overlap 621829, overlap 621829 AAACTTCAAGTTTTT TTCTTG CAT CATGAA TTTTTTCTGGTGTTT MS53_0527 622654 - 622193 - | hypothetical protein MS53_0528 623562 - 622687 - | putative DNA polymerase I dnaE 626531 - 623559 - | DNA polymerase III DnaE TERM 1106 623988 - 624011 + g 74 -4 -5.32608 | opp_overlap 624005, overlap 624005 TCCATCAGTTTGTTC GCTTTTAT CTAAAGTC ATAAAAGC TTTTTTAACTTTTTT TERM 1107 625035 - 625050 + g 74 -4.8 -5.1861 | opp_overlap 625044, overlap 625047 TAGATTTTCAATATT TTTAAC AATG GTTAAA TTTTTTAATCCTAAA TERM 1108 626143 - 626121 - G 79 -3.4 -5.71983 | opp_overlap 626121, overlap 626104 626123 TGAATTATAAAAAAA GTTTGGAAGT TCA ACTTCTAAGC TTTTTTTATTTTTTA TERM 1109 626121 - 626143 + g 100 -7.8 -6.28401 | opp_overlap 626104 626121 626123 TGAATTATAAAAAAA GTTTGGAAGT TCA ACTTCTAAGC TTTTTTTATTTTTTA MS53_0530 627977 - 626547 - | hypothetical protein TERM 1110 627095 - 627110 + g 82 -2.6 -5.98781 | AATTTGAATATAAAT CTTGAA GTGA TTTAAG TTTTTTTTGATTGTC TERM 1111 627914 - 627898 - G 88 -5.2 -5.68023 | CTATAAGCAAAAAAA CTAACT ATTGA AGTTAG AGTTAATGTCGATAT TERM 1112 627927 - 627937 + g 71 -2.6 -5.54264 | opp_overlap 627936, overlap 627936 TAGAGTTAATGTCGA TATT AGT AATA TTTTTTTAAATATTT topA 629886 - 628009 - | DNA topoisomerase I TERM 1113 628694 - 628714 + g 78 -8.5 -3.78172 | opp_overlap 628693 628694 628696, overlap 628692 GAATTTTTAAATAAG TATTTATCA ACT TGATAAATA TATTGTTTTGATTTA TERM 1114 628714 - 628694 - G 73 -8.5 -2.95918 | opp_overlap 628694 628692, overlap 628693 628696 GAATTTTTAAATAAG TATTTATCA ACT TGATAAATA TATTGTTTTGATTTA rpsF 630098 - 630589 + | 30S ribosomal protein S6 TERM 1115 630693 - 630674 - g 79 -6.6 -4.64346 | overlap 630692 AAAAACTAAAAACAA TATTTCTT ATGC AAGAAATA CAATTGCTGTAACAA ssb 630600 - 631166 + | single stranded binding protein rpsR 631166 - 631501 + | 30S ribosomal protein S18 TERM 1116 631531 - 631517 - f 70 -8.5 -2.68736 | opp_overlap 631517, overlap 631515 631516 631510 631507 TAAATTAACAAAACC GCCGC TAAAT GCGGC TTTTTTATTATTTTT TERM 1117 631517 - 631531 + F 100 -8.5 -5.80727 | opp_overlap 631515 631517 631516 631510 631507 TAAATTAACAAAACC GCCGC TAAAT GCGGC TTTTTTATTATTTTT TERM 1118 632239 - 632255 + G 70 -8.1 -3.14132 | opp_overlap 632233 632228 AAAACGCAATGGAGT TTATTGC AAA GCAATAA TTACTCCAAAGCAAA MS53_0535 631598 - 632434 + | putative citrate lyase beta chain MS53_0536 632435 - 632971 + | putative transcription regulatory protein TERM 1119 633130 - 633114 - g 71 -7.3 -3.77136 | overlap 633109 633129 AGAAGAAATTGCAAA TATCGCC AGA AGCGATA AAGACTTTAAAATCA MS53_0537 632983 - 634305 + | putative coenzyme A transferase TERM 1120 634783 - 634760 - g 76 -9 -3.09766 | opp_overlap 634760, overlap 634758 TACAGATAAATTAGA CCTAGAAAAA GGAT TTTTCCTAGG TGATTTGAATAGAGC MS53_0538 634314 - 634853 + | hypothetical protein MS53_0539 634863 - 635528 + | hypothetical protein TERM 1121 635603 - 635583 - f 70 -8.3 -2.64773 | opp_overlap 635583 635592, overlap 635582 TAATTTAATAAAATT GCCGATTTT TAA AAAGTCGGC TTTTTATTTTTTAAA TERM 1122 635583 - 635603 + F 100 -10.5 -5.75538 | opp_overlap 635583 635582, overlap 635592 TAATTTAATAAAATT GCCGATTTT TAA AAAGTCGGC TTTTTATTTTTTAAA TERM 1123 635592 - 635609 + F 84 -5.7 -5.15117 | opp_overlap 635583 635582, overlap 635583 AAAATTGCCGATTTT TAAAAAG TCGG CTTTTTA TTTTTTAAAATTTTA TERM 1124 635689 - 635662 - f 86 -5 -5.80364 | ATTTTAACAAAAAAA CTCCCAAAAA AATTAAAA TTTTTGAGAG GAGTGCATTGCACTT TERM 1125 635779 - 635755 - f 85 -5.1 -5.42198 | opp_overlap 635756 635762, overlap 635756 GGTTAAAAAATAAAA TTAAAACTGCA TTT TGCAATTTTAT AATTAAAAAAATTTA TERM 1126 635778 - 635756 - f 82 -8.6 -3.83692 | opp_overlap 635756 635762, overlap 635755 GTTAAAAAATAAAAT TAAAACTGCA TTT TGCAATTTTA TAATTAAAAAAATTT TERM 1127 636042 - 636069 + F 86 -2.2 -6.17669 | gap 1, overlap 636048 636049 GAATAAATTTAGCAT TTCAACTTTTTCA ATA TGAAAA-GTTTAA TTTTTTTGTTTTATT TERM 1128 636546 - 636528 - g 80 -7.6 -4.62441 | overlap 636524 636536 TCTTATATAAAGAAA TGAAATAA TAT TTATTTCA AATATAAACCTTTTG MS53_0540 636207 - 637034 + | hypothetical protein TERM 1129 637048 - 637065 + F 100 -7.1 -5.5074 | opp_overlap 637048 AAAAAATAAAATTAA TGAACAA TTTA TTGTTCA TTTTTTATTAAATTA TERM 1130 637065 - 637048 - f 71 -7.1 -3.989 | opp_overlap 637048 AAAAAATAAAATTAA TGAACAA TTTA TTGTTCA TTTTTTATTAAATTA TERM 1131 637163 - 637137 - f 80 -4.6 -5.44721 | opp_overlap 637145, overlap 637145 ATTACTTTAAAAAAA CATAAAAATTAA AAA TTAATTTTTTCG TCGATATTGTAAGGT TERM 1132 637243 - 637265 + F 79 -3.6 -5.70829 | TTTACAATATGGAAG TAATAAAG CAAAACT CTTTATTA TTTTTTTATAGTATT TERM 1133 638180 - 638190 + G 71 -4 -5.03715 | opp_overlap 638178, overlap 638178 AAGATAGTAAAGATT TGTT ACA AACA TTTTTTAAAACTGAT MS53_0541 637315 - 638490 + | hypothetical protein TERM 1134 638495 - 638508 + F 77 -2.4 -5.94713 | opp_overlap 638495 TTAAAAAATAAGAAA CACT TAAAAT AGTG TTTTTTTTCTGCAAT TERM 1135 638642 - 638655 + F 78 -2.5 -5.95449 | opp_overlap 638642, overlap 638636 TTTAAAAAATAAGAA TTATA TTTT TATAA TTTTTTGTTTTGTTT TERM 1136 639589 - 639573 - g 81 -8.1 -4.30987 | ATTCCTGATAATAAA GTTGTTA TTT TAACAAC AGGATCTCAAGGTGA MS53_0542 638706 - 640595 + | hypothetical protein TERM 1137 640589 - 640632 + T 91 -12.2 -3.41878 | opp_overlap 640601, overlap 640601 TGAAGATGATGATGG GGAATAAAAAAATTATGAAA ATCA TTTCATAATTTTTTTATATC TTATCGATTAAAAAA TERM 1138 640620 - 640601 - T 100 -6.6 -5.7946 | opp_overlap 640589 640601 TGGGGAATAAAAAAA TTATGAAA ATCA TTTCATAA TTTTTTTATATCTTA TERM 1139 640601 - 640620 + T 100 -6.6 -5.80248 | opp_overlap 640601, overlap 640589 TGGGGAATAAAAAAA TTATGAAA ATCA TTTCATAA TTTTTTTATATCTTA MS53_0543 642347 - 640626 - | hypothetical protein TERM 1140 640764 - 640777 + g 74 -3.9 -5.28826 | GCAATTTAATAGCGT TTCAT TATG ATGAA TTTTTTCTGAAATTT TERM 1141 641789 - 641779 - G 70 -3.2 -5.27335 | opp_overlap 641780, overlap 641780 GTCTTTAAAGAAAAA GCTA AAA CAGC AATGTTTTTGTTTGT TERM 1142 641928 - 641955 + g 73 -4.4 -5.18355 | gap 1 CGGATTAATAGTTAG CACAAAAGA-AAT AGA ATTGTTTTTTGTG TTTTTAATTTTTCAA TERM 1143 642313 - 642296 - G 90 -3.5 -6.02919 | CGATAAATAAAAAAA TAGTCAT AGAA ATAACTA TAAATGGAATCAAAA pcrA 644524 - 642344 - | ATP-dependent helicase TERM 1144 642651 - 642662 + g 70 -3 -5.24129 | opp_overlap 642651 GATCCTCTTGAATCA CTTA CAAA TAAG TTTTTTCTAGCACGA TERM 1145 643633 - 643650 + g 72 -7.1 -3.98256 | opp_overlap 643635 TGTTTTTAATTAATT TATTAGC AGAC GCTAATA TCTTTTTAGTAGAAC TERM 1146 644485 - 644500 + g 72 -4.7 -5.00138 | GAGAATCAAAATATT CAACG GCTTCA CGTTG TTTTTCGTTTAAATC MS53_0545 645214 - 644561 - | hypothetical protein TERM 1147 644605 - 644587 - G 77 -6.2 -4.7261 | AGTCACTAAAATAAA TATATTTA CGA TAAATATA AACTTTAGGTTTGAA TERM 1148 645172 - 645162 - G 74 -4 -5.24291 | AAAACTAAAAGAAAA TCAA AAA TTGA GGCAAAAAACCTTCT MS53_0546 646278 - 645211 - | hypothetical protein TERM 1149 645308 - 645333 + g 90 -8.5 -4.64598 | overlap 645303 ATGTATTTGTTTTCT TCTAGAAACTT GTCA AAGTTTTTAGA TTTTTCAAGTGCTTC TERM 1150 645408 - 645418 + g 76 -4 -5.42514 | overlap 645378 TTTTTAAGTCAGTAT CAAA GGC TTTG TTTTTTAGTTTGTAA TERM 1151 645560 - 645536 - G 76 -8.8 -3.55622 | overlap 645539 TTGAACTCTTTTAAA TAAGCTTTAA TGTTT TTAAAGCTTA GCCTGAATTTTTGGA TERM 1152 646285 - 646327 + r 70 -2.2 -5.49729 | ATATTTCAAAAATTT GCAAAAAAAAGCTAGA TTTTACGATTT TCTAGCTTTATTTTTC TTTTTTTCGGTAGTT MS53_0547 647475 - 646303 - | hypothetical protein TERM 1153 647830 - 647805 - R 83 -8.5 -4.13728 | opp_overlap 647794, overlap 647794 CATATATTTGTAAAA TATTTAAACCA TTAG TGGCTTAAATA TCACCTAGATTACCT TERM 1154 647949 - 647963 + r 87 -2.9 -6.17669 | opp_overlap 647949 TATTTGCTTTTTAAA TTTCT TTGCC AGAAA TTTTTTTATTTTCTT MS53_0548 650040 - 647944 - | hypothetical protein TERM 1155 648317 - 648342 + g 77 -7.7 -4.22009 | TTTAATTCTAAGTTT TTAATTCCTTC TTCA GATGGAATTAA TTTATATTCACTAAT TERM 1156 648504 - 648514 + g 71 -2.6 -5.42975 | CTTCATCTCTTGATT TAAA ACT TTTA TTTTTGTTTCTATAA TERM 1157 648633 - 648663 + g 100 -9.3 -5.00138 | overlap 648629 TATTAACTACTTTTT GAACTTTAAAATT TAAAT AATTTTGAAGTTC TTTTTGATTTACATC TERM 1158 648940 - 648958 + g 77 -7.6 -4.22231 | overlap 648939 AGCGGTTCCATTACC TATTACTA TGA TAGTAATA TTATGTTTTTTAATT TERM 1159 649508 - 649528 + g 70 -5.5 -4.54047 | ATGAGTTTTCCGTAA GCTAAAATA TTT TCTTTTAGC TTTTCTCTAAGATCA TERM 1160 650124 - 650098 - H 85 -11 -2.98545 | overlap 650095 650118 650119 TCTGTATAATAATTA TGGGTAGTTTTT TTA AAAAGCTACCCA ATGGTAAAAATTTAT TERM 1161 650242 - 650268 + H 100 -8.1 -5.23292 | opp_overlap 650243, overlap 650243 TTAGTTAATAATTCA AGTGGAAAATC AAAAC GATTTTCCACA TTTTGTTTTCTATGG TERM 1162 650243 - 650267 + H 95 -11.6 -3.72348 | opp_overlap 650243, overlap 650242 TAGTTAATAATTCAA GTGGAAAATC AAAAC GATTTTCCAC ATTTTGTTTTCTATG TERM 1163 650267 - 650243 - H 91 -12.3 -3.29459 | opp_overlap 650242 650243 TAGTTAATAATTCAA GTGGAAAATCA AAA CGATTTTCCAC ATTTTGTTTTCTATG smf 650328 - 651068 + | putative DNA processing protein TERM 1164 651086 - 651071 - T 74 -5.4 -4.86731 | opp_overlap 651071, overlap 651066 TGTTGCGAAATAAAA TTGGAC AAAA GCCCAA TTTTTGATTTTTATT rpmA 651355 - 651101 - | 50S ribosomal protein L27 rplU 651662 - 651360 - | 50S ribosomal protein L21 TERM 1165 651729 - 651744 + H 76 -4 -5.55769 | AACCTTTTTAGAACG GTTACT ATTC GGTAAC TTTTTTATTATAGCA TERM 1166 651815 - 651800 - H 100 -6.2 -5.80364 | opp_overlap 651800 ATTTTAATAAAAAAA TGCATT TTAT AATGCA TTTAAAATCTTTTTT MS53_0552 651889 - 652152 + | hypothetical protein MS53_0553 653222 - 652197 - | putative ABC transporter permease protein TERM 1167 653664 - 653640 - R 95 -4.4 -6.32976 | AAAAAAATAAAAAAA GAAAAATTAC TAAAT GTAACTTCTC TAAATATTATTTAAA MS53_0554 654365 - 653913 - | hypothetical protein MS53_0555 655665 - 654589 - | hypothetical protein MS53_0556 656156 - 655893 - | hypothetical protein TERM 1168 656392 - 656368 - R 100 -10.9 -4.61231 | opp_overlap 656368 656373 656375, overlap 656347 656375 TCATATTTTGAAAAA TAAAAAACGCT ATA AGCGTCTTTTA TAAATTAATAATTGT TERM 1169 656368 - 656392 + r 70 -8.7 -2.59035 | opp_overlap 656347 656368 656375, overlap 656373 656375 TCATATTTTGAAAAA TAAAAAACGCT ATA AGCGTCTTTTA TAAATTAATAATTGT TERM 1170 656385 - 656375 - R 100 -6.8 -5.93252 | opp_overlap 656373 656368 656375, overlap 656368 TTGAAAAATAAAAAA CGCT ATA AGCG TCTTTTATAAATTAA TERM 1171 656375 - 656385 + r 71 -6.8 -3.84304 | opp_overlap 656375 656368, overlap 656373 656368 TTGAAAAATAAAAAA CGCT ATA AGCG TCTTTTATAAATTAA MS53_0557 657109 - 656390 - | putative lipoprotein signal peptidase ileS 659789 - 657102 - | isoleucyl-tRNA synthetase TERM 1172 657598 - 657612 + g 84 -5.7 -5.20781 | TTTTTAAGTACCATT TGACG CTCTT CGTCA TTTTCTTTTCTAATG TERM 1173 658454 - 658467 + g 74 -3.9 -5.2189 | opp_overlap 658454 CACGGTTTTCAATCA TAGAA ATCA TTCTA TTTTTTGATCATTCA TERM 1174 658477 - 658489 + g 74 -6.3 -4.46617 | ATTCTATTTTTTGAT CATTC AGG GAATG TTTTAACTTTATTTT TERM 1175 658929 - 658896 - G 80 -9.8 -2.89602 | opp_overlap 658900, overlap 658895 TGCTTTATATCAAAT TGAATTTCTTGGCA TTTCTT TTCCAAGAAATTCA TCAACTACTTCATAA TERM 1176 659361 - 659375 + g 84 -5.8 -5.32882 | opp_overlap 659347, overlap 659347 ATCAGAAAATAGTTG CAATTT CTG AAATTG TTTTTTCTGATGCTC TERM 1177 659890 - 659849 - R 88 -5.6 -5.626 | opp_overlap 659834, overlap 659884 659889 TATTTTATAAAAAAA TATTTTATTTTTTAGC AAAAAATCAA ACTAAAAAATAAAATA CAAAAAATCTTTTTT TERM 1178 659914 - 659884 - R 78 -4.2 -5.41359 | opp_overlap 659891, overlap 659849 659889 659891 AATCAAACTAAAAAA TAAAATACAAAAAA TCT TTTTTTGTTTTTTT GGTGGCCCCGGCAGG TERM 1179 659909 - 659889 - R 80 -4.1 -5.47846 | opp_overlap 659891, overlap 659849 659884 659891 AACTAAAAAATAAAA TACAAAAAA TCT TTTTTTGTT TTTTTGGTGGCCCCG TERM 1180 659891 - 659907 + r 100 -6.7 -5.52384 | opp_overlap 659889 659884 659891 CTAAAAAATAAAATA CAAAAAA TCT TTTTTTG TTTTTTTGGTGGCCC TERM 1181 659907 - 659891 - R 74 -6.7 -4.32882 | opp_overlap 659891, overlap 659889 659884 CTAAAAAATAAAATA CAAAAAA TCT TTTTTTG TTTTTTTGGTGGCCC TERM 1182 660285 - 660299 + r 70 -7.8 -3.26947 | opp_overlap 660285 CGAACCTGTAGCCAA CCGGTT ATG AGCCGG TTGCTCTAACCGTTG MS53_0559 661747 - 660686 - | hypothetical protein TERM 1183 660846 - 660856 + g 71 -4 -5.17507 | opp_overlap 660846 CCTCCAACTTCAAAA GAAA TAT TTTC TTTTTGTTGAGTTTT TERM 1184 660906 - 660886 - G 77 -6.3 -4.66537 | opp_overlap 660879, overlap 660888 TGCTTGAATATAAAA CATTTGTAA TTA TTACAAATA AATATTCAACTTTCA TERM 1185 660904 - 660888 - G 70 -6.7 -3.94773 | opp_overlap 660879, overlap 660886 CTTGAATATAAAACA TTTGTAA TTA TTACAAA TAAATATTCAACTTT TERM 1186 661834 - 661816 - R 100 -6.8 -6.32976 | opp_overlap 661816 AAAAAAATAAAAAAA CTTTAGTT TTT AACCAAAG TTTATGAAAAATTTA TERM 1187 662352 - 662368 + r 78 -7.3 -4.4715 | opp_overlap 662349 GGGCAAGATAAGCCT GTTATCC CCA GGGTAAC TTTTATCCGTTGAGC TERM 1188 664266 - 664277 + r 77 -7.2 -4.2354 | AGAATCTATTTCACT CCCC TCTC GGGG TTCTTTTCACCTTTC TERM 1189 665038 - 665024 - R 83 -3.5 -5.86332 | opp_overlap 665037, overlap 665036 CCAAGGCAAAAAAAA GCGAT ACACA ACCGC TTTTAGAATTTTTCT TERM 1190 665037 - 665061 + r 72 -7.3 -3.78329 | opp_overlap 665024 665036 AAGCGATACACAACC GCTTTTAGA ATTTTTC TCTAAAAGC TTTCAATTAATAAAA TERM 1191 665144 - 665125 - R 78 -10 -2.56288 | opp_overlap 665125, overlap 665121 AAAGGAGGTAATCCA TCCCCACG TTCT CGTAGGGA TACCTTGTTACGACT TERM 1192 665178 - 665190 + r 72 -9.1 -2.62933 | CCCCAGTCACCGGTC CTGCC TTA GGCAG TCGTCTCCGAAGTTA TERM 1193 666403 - 666416 + r 73 -6.7 -4.1552 | CCCCGATCTCTTAGT GAAGC AAAC GCTTC TTTCTTAAAAAAATC TERM 1194 666422 - 666445 + r 71 -8.4 -2.88579 | CAAACGCTTCTTTCT TAAAAAAATC ATGC GATTTTTTTA TATATCCGGCATTAG TERM 1195 666734 - 666721 - R 76 -3.9 -5.45652 | ATCGTTAAGAAAAAA TTGTT TTTA AACAA GATAATTTAAAACTC TERM 1196 666790 - 666800 + r 74 -2.6 -5.77571 | opp_overlap 666790, overlap 666796 TTTAAAATGTATATA TTTT TTT AAAA TTTTTATTTTTTAAT MS53_0560 667610 - 666804 - | hypothetical protein TERM 1197 667528 - 667555 + g 75 -3.6 -5.40072 | opp_overlap 667527, overlap 667527 ATTATAAAATCAATT TTTTCTCTAAAA ATAA TTTTAGGCAAAA TTTTTTTAAGCGCAA recA 668619 - 667630 - | recombinase A TERM 1198 668714 - 668690 - R 100 -8.8 -5.18371 | opp_overlap 668690 668696, overlap 668696 TTCCAGAAAATAAAA TAAAAATTGC TGCGC GCAATTTTTA TTTACGTAATTTAAA TERM 1199 668690 - 668714 + r 81 -8.8 -3.74224 | opp_overlap 668690 668696, overlap 668696 TTCCAGAAAATAAAA TAAAAATTGC TGCGC GCAATTTTTA TTTACGTAATTTAAA TERM 1200 668696 - 668708 + r 72 -3.4 -5.30616 | opp_overlap 668690 668696, overlap 668690 AAAATAAAATAAAAA TTGC TGCGC GCAA TTTTTATTTACGTAA TERM 1201 668708 - 668696 - R 78 -3.4 -5.70761 | opp_overlap 668696 668690, overlap 668690 AAAATAAAATAAAAA TTGC TGCGC GCAA TTTTTATTTACGTAA rpsO 668978 - 668712 - | 30S ribosomal protein S15 TERM 1202 668903 - 668891 - G 77 -7.7 -4.21908 | TATCATGAGTTAAAA GTGCA ACT TGCAC AAATGCATTACCGGT ribF 669903 - 669067 - | hypothetical protein TERM 1203 669446 - 669492 + g 85 -10 -3.48465 | gap 1 TGCTTAAGCTCTGAT GTTGAAATTTTAGAATTGTTG AATTTG TAA-AATTCTAAAATTTCAAC TTGTAAATTTGGATT TERM 1204 669660 - 669702 + g 80 -10.2 -2.79273 | opp_overlap 669669 669671, overlap 669659 669662 669669 AATCAAGTTCTACCA CGCAGTCAATATTTAACTTT GCA AAATTTAAATATTTACTGTG ATTATCTTGAAAAAA TERM 1205 669662 - 669700 + g 74 -9.2 -2.94293 | opp_overlap 669669 669671, overlap 669660 669659 669669 TCAAGTTCTACCACG CAGTCAATATTTAACTTT GCA AAATTTAAATATTTACTG TGATTATCTTGAAAA TERM 1206 669837 - 669853 + g 87 -8.1 -4.78839 | opp_overlap 669836 ATGCTTCAAAAGCAC CGATAAT GTA ATTATCG TTTTCTTGTGGCGTT MS53_0564 670697 - 669903 - | hypothetical protein TERM 1207 670584 - 670602 + g 73 -4.6 -5.14645 | opp_overlap 670569, overlap 670571 670580 TTCTCTAGCGGTAGC TAGCGTAG TTA TTACGTTA TTTTTCTTAAGTTCT truB 671562 - 670699 - | tRNA pseudouridine synthase B TERM 1208 671129 - 671148 + g 77 -2.2 -5.81622 | opp_overlap 671129 TCTAGAAGTTCAAAA CTAAAAAT TTTT ATTTTTTG TTTTTTTAGTTTTAT MS53_0566 672095 - 671562 - | hypothetical protein TERM 1209 671896 - 671906 + g 71 -4 -5.08824 | GTTTCTTGTGGCATT GATT CAA AATC TTTTTTGCCTGAAAA TERM 1210 672250 - 672264 + G 70 -6.4 -4.19238 | opp_overlap 672250 672263 ATAAAACCTATGATA GCTTGT ATA ACGAGC TTTTAGAATTAGAAG TERM 1211 672982 - 672959 - g 71 -4 -5.093 | TTTAAAAGAACAAAA TTTTGAAGTT AATG AATTTCAAAA GCTAGCTAAAAATGA TERM 1212 673521 - 673537 + G 70 -6.7 -3.94 | ATTCAAATGCTTACA TTTTTTG TTT CAAAAAA TTGTTTAAACATTAC TERM 1213 673918 - 673901 - g 70 -5.7 -4.28589 | opp_overlap 673859, overlap 673859 AAAAAGTATTGAAAA CTTAAAA GAGT TTTTAAG CAGCGAAAAAAATCA lig 672135 - 674228 + | DNA ligase MS53_0568 674221 - 674757 + | putative tRNA/rRNA methyltransferase MS53_0569 674747 - 675460 + | putative tRNA/rRNA methyltransferase TERM 1214 675679 - 675653 - g 79 -6.8 -4.79384 | AGAACAAAACGAAAA TTTAGTTTTAGA AAA TTTAAAACTAAA AGCTGATTTGAAATT MS53_0570 675453 - 675701 + | hypothetical protein mgtA 678642 - 675886 - | cation-transporting P-type ATPase TERM 1215 677310 - 677288 - G 73 -9.2 -2.71745 | opp_overlap 677288, overlap 677287 677283 CCTTTAACAATTAAG CTTCTATCAC GAA GTGATTGAAG TAAAACTGACATCAT TERM 1216 677919 - 677931 + g 74 -4.1 -5.1971 | GTTTTTTTTGCAATG GAGTT AAA AGCTC TTTTTGATTTTTAAT TERM 1217 678750 - 678722 - R 85 -8.4 -4.37658 | gap 1, opp_overlap 678711 678722 678729, overlap 678711 678729 AAGGCTTTTATAAAA TGTAAAAGTTGCA TATT TGCAACTTTT-CA AATATTAAACTAACT TERM 1218 678744 - 678729 - R 78 -7.6 -4.4595 | opp_overlap 678722 678729, overlap 678722 TTATAAAATGTAAAA GTTGCA TATT TGCAAC TTTTCAAATATTAAA TERM 1219 678729 - 678744 + r 77 -7.6 -4.1964 | opp_overlap 678729 678722, overlap 678722 TTATAAAATGTAAAA GTTGCA TATT TGCAAC TTTTCAAATATTAAA rplQ 679117 - 678755 - | 50S ribosomal protein L17 rpoA 680130 - 679129 - | DNA-directed RNA polymerase subunit alpha rpsK 680539 - 680150 - | 30S ribosomal protein S11 TERM 1220 680350 - 680382 + g 100 -7.7 -5.87996 | overlap 680352 680375 TTGCCATTTGAGCTG CGTCTTTGGCTGCCT CTG ATGCAGCGAAAGAAG TTTTTTTCTTAGTTC TERM 1221 680352 - 680380 + g 76 -8.9 -3.03774 | overlap 680350 680375 GCCATTTGAGCTGCG TCTTTGGCTGCCT CTG ATGCAGCGAAAGA AGTTTTTTTCTTAGT rpsM 680907 - 680539 - | 30S ribosomal protein S13 rpmJ 681024 - 680911 - | 50S ribosomal protein L36 infA 681247 - 681032 - | translation initiation factor IF-1 map 681994 - 681248 - | methionine aminopeptidase TERM 1222 682075 - 682122 + r 81 -7.4 -4.62313 | gap 1, opp_overlap 682088, overlap 682085 682115 AGCGATTTTAATAGC TCTA-TTGCAATTAGCTTTGGAT TAG ATTCAGAGCTAATTTTAATTAGA TTATTTTTGCTTTTG adk 682691 - 682056 - | adenylate kinase TERM 1223 682085 - 682111 + g 90 -9.6 -4.46267 | opp_overlap 682088, overlap 682075 ATAGCTCTATTGCAA TTAGCTTTGGAT TAG ATTCAGAGCTAA TTTTAATTAGATTAT secY 684118 - 682685 - | preprotein translocase subunit SecY TERM 1224 684228 - 684248 + G 81 -2 -5.95539 | overlap 684231 684231 AATATCTACTATTGT TGATTTTT GACAA AAAAATTA TTTTTTTATTTAAAA MS53_0582 684155 - 688099 + | hypothetical protein TERM 1225 688215 - 688174 - f 86 -9 -4.20148 | opp_overlap 688189 ACGATTCCAAAATAA GGC-GCTTATGTAAGATGCA ATAA TGCA-CTTATATAAGCTGCC GTAAACGCCGAGGTA TERM 1226 688223 - 688236 + F 100 -8.1 -5.60993 | opp_overlap 688222 AAGCTGCCGTAAACG CCGAG GTAA CTCGG TTTTTTTATACAAAA TERM 1227 688358 - 688330 - g 71 -2.5 -5.47399 | TTAATTGTAAAAAAA GAAAACAACAAAA TTG TTTTACCGTTGTC AGATATAGATACTAT MS53_0583 688252 - 689142 + | hypothetical protein MS53_0584 689159 - 689452 + | hypothetical protein MS53_0585 689455 - 690219 + | hypothetical protein TERM 1228 690199 - 690209 + F 78 -2.6 -5.95166 | opp_overlap 690183 690199 TTAATAAAAAAATCA TTAA AAA TTAA TTTTTTTTAATTAAA TERM 1229 691319 - 691278 - f 86 -9 -4.20148 | opp_overlap 691293 ACGATTCCAAAATAA GGC-GCTTATGTAAGATGCA ATAA TGCA-CTTATATAAGCTGCC GTAAACGCCGAGGTA TERM 1230 691327 - 691340 + F 100 -8.1 -5.60993 | opp_overlap 691326 AAGCTGCCGTAAACG CCGAG GTAA CTCGG TTTTTTTATACAAAA TERM 1231 691462 - 691434 - g 71 -2.5 -5.47399 | TTAATTGTAAAAAAA GAAAACAACAAAA TTG TTTTACCGTTGTC AAATATAGATACTAT MS53_0586 691356 - 691628 + | hypothetical protein TERM 1232 691665 - 691631 - T 100 -13.8 -4.4267 | opp_overlap 691631 TTTTAAAACTTAAAA CTACGAATAACCCTAC AAT ATAGAGCTATTCGTAG TTTTTTATAATACAA TERM 1233 691631 - 691665 + T 100 -8.7 -5.31275 | opp_overlap 691631 TTTTAAAACTTAAAA CTACGAATAACCCTA CAATA TAGAGCTATTCGTAG TTTTTTATAATACAA MS53_0587 692358 - 691684 - | hypothetical protein TERM 1234 691830 - 691844 + g 78 -5.8 -4.99043 | ATAATTTTTGATTTT TAATTG CAT CAATTA TTTTGTTTGTAGGCA TERM 1235 692198 - 692223 + g 71 -4.1 -5.17353 | ATTTCTGATTTTATA GCTGATAAATT GAGT AATTTTTTAGC TTTTTTAATGAGTCT MS53_0588 692953 - 692504 - | putative transposase MS53_0589 693345 - 692941 - | hypothetical protein TERM 1236 693412 - 693384 - H 100 -12.1 -5.89659 | AGAAAAAAATAAAAA TTTCTTAATATAT AAA ATATATTAAGAAA TTCAAAAAGTCTCAA TERM 1237 693625 - 693607 - H 70 -6.2 -4.03085 | opp_overlap 693607 693609 CGATAAAAAGGCAAA TATTTATT TAT AATAAATA TATATGAGATTGAAA MS53_0590 693623 - 695350 + | hypothetical protein TERM 1238 695443 - 695457 + T 91 -5.7 -5.8096 | opp_overlap 695443 CACTTACAATATGAA CCACA CATTT TGTGG TTTTTATTTTTTATA serS 696726 - 695461 - | seryl-tRNA synthetase TERM 1239 696314 - 696327 + g 70 -3.1 -5.31059 | GCTATTTCATAGTGA GGCTT TTCA AAGTC TTTTTTAGTTCCTAT parE 698653 - 696728 - | topoisomerase IV subunit B TERM 1240 697263 - 697285 + g 80 -8.6 -3.98172 | GCTATTTCAGTATTT TCTAAAATGT CAA GCATTTTAGA TTTCTCGCTATTAAT TERM 1241 697570 - 697588 + g 70 -3.2 -5.31059 | CTTCTTTTTTATTAT CTAAAAAT CAA ATTTCTAG TTTTTTAGTTGCTAT TERM 1242 697732 - 697744 + g 74 -4.9 -5.14563 | opp_overlap 697732 TAATATCTTCAAAAT CAAAA ATA TTTTG TTTTTTAATAAAAGC TERM 1243 698553 - 698577 + g 93 -11.6 -3.18429 | opp_overlap 698548 698549 AAATGATGAAGTCCA TGTATATCGG CTCCA CCGATATACA TTCCTGGACGTTTTC TERM 1244 698714 - 698688 - R 100 -10.4 -5.48825 | opp_overlap 698694 TATTATTTAAAAAAA TTAAAAGCAAAA TTA CTTTGCTTTTAA AACGCTGGCTACAAA dnaJ 699818 - 698700 - | heat shock protein DnaJ TERM 1245 699760 - 699776 + g 76 -7.3 -4.26076 | TATGCAGTTTTTATT TCAGCTG CGC TAGCTGA TTTTGATACACCTAA TERM 1246 700091 - 700120 + r 90 -5.1 -5.8096 | opp_overlap 700091 700096 TCTGTATTATTAAAT TAAAAGCAAGG TTTTTGTT CCTTGCTTTTC TTTTTATTTTTTGTC MS53_0594 701038 - 700124 - | hypothetical protein rluD 701979 - 701068 - | ribosomal large subunit pseudouridine synthase D TERM 1247 702011 - 701993 - R 100 -7.5 -5.48303 | opp_overlap 701992 701996 ATAATTTTAAAAAAA CAAGCAA ATTAA TTGCTTG AATTTAATAAGTCTG trxB 702933 - 702001 - | thioredoxin reductase lgt 703874 - 702933 - | prolipoprotein diacylglyceryl transferase MS53_0598 705111 - 703981 - | hypothetical protein TERM 1248 704019 - 704029 + g 80 -5.4 -5.27335 | opp_overlap 704019 TATGCTCATTGTAAA CTTC TGG GAAG TTTTTCTTTAACAGA TERM 1249 704394 - 704404 + g 71 -4 -5.09225 | TTTCTCTAACTTGTT TGTA AAC TACA TTTTTTAAATCAGCT TERM 1250 704907 - 704922 + g 71 -2.6 -5.48213 | opp_overlap 704901, overlap 704901 TATAAACTACAAAAT TTGGAT TTGA ATCTAA TTTTTGTTTTCAATG TERM 1251 705154 - 705129 - R 83 -9.1 -3.90744 | opp_overlap 705129 705135, overlap 705135 GTTCCTTTTAAATAA CAAAAATCTGC ACAT GCAGATTTATG CTGGTTTTTTACGTG TERM 1252 705129 - 705154 + r 72 -9.1 -2.63182 | opp_overlap 705129 705135, overlap 705135 GTTCCTTTTAAATAA CAAAAATCTGC ACAT GCAGATTTATG CTGGTTTTTTACGTG TERM 1253 705148 - 705135 - R 95 -6.7 -5.38549 | opp_overlap 705135 705129, overlap 705129 TTTAAATAACAAAAA TCTGC ACAT GCAGA TTTATGCTGGTTTTT TERM 1254 705135 - 705148 + r 73 -6.7 -4.06719 | opp_overlap 705129 705135, overlap 705129 TTTAAATAACAAAAA TCTGC ACAT GCAGA TTTATGCTGGTTTTT MS53_0599 707039 - 705150 - | putative inner membrane protein translocase component YidC TERM 1255 705347 - 705367 + g 81 -8.3 -4.42464 | ATTTTTTAAGTGCTT GAACTTCAG CAA CTGTAGTTC TTTCTTTAAGACGTT rnpA 707430 - 707092 - | ribonuclease P protein component TERM 1256 707353 - 707367 + g 81 -2.2 -5.93252 | overlap 707364 GTAGACAATTACATA TTTATT AGC GATAAA TTTTTTATTTTTAAG rpmH 707590 - 707444 - | 50S ribosomal protein L34 TERM 1257 707786 - 707765 - R 100 -5.3 -6.01369 | opp_overlap 707765 CAAATAATAAAAAAA TACAAACTT AATA AAATTTGTA TTTTTCAAATTAATT MS53_0602 710271 - 707806 - | hypothetical protein TERM 1258 709587 - 709599 + g 71 -4.1 -5.12068 | TCTTTGTAAATCACT GCTGA GCC TTAGC TTTTTCTTCAATGTA TERM 1259 709699 - 709719 + g 80 -5.6 -5.01042 | overlap 709712 ATTATTTAAAGTATC GTTTTTAA GTGCA TTAAAAAC TTTTTGATTTAAGTT TERM 1260 709991 - 710005 + g 71 -8.6 -2.85803 | AGTTTTTCGCTTTTC GCTTGA GGG TCAAGC TGTGATAGTGATTTT MS53_0603 710400 - 711803 + | putative trigger factor TERM 1261 711970 - 712011 + T 93 -8.4 -4.88067 | gap 1, opp_overlap 711978, overlap 711978 TACATGTACATTTTA TAAACAAATCTCAAAGCCA TTTTT TGGTTTTGGGATTT-TTTA TTTTTATAAATCAAT TERM 1262 711978 - 712004 + T 100 -8.1 -5.98675 | opp_overlap 711978, overlap 711970 CATTTTATAAACAAA TCTCAAAGCCA TTTTT TGGTTTTGGGA TTTTTTATTTTTATA TERM 1263 712077 - 712044 - T 72 -3.3 -5.33921 | overlap 712037 AAAGTAATTAAAAAA TAAAAAATGAACACA TTAA CATGTCCATTATTTA TATTTTATTTTCAAT MS53_0604 712357 - 712112 - | hypothetical protein MS53_0605 713448 - 712366 - | putative endoglucanase TERM 1264 712772 - 712793 + g 71 -8.7 -2.8293 | overlap 712767 712774 TCAGGATCTACTAGC GAGGTGCTA GTTA TAGCTCCTC TGGTTCCTACTTCTT TERM 1265 713271 - 713282 + g 78 -7.2 -4.55016 | CAATCATTACTTTTG GCGC TTTT GCGC TTTTGGCTTTTTTAT TERM 1266 713640 - 713661 + H 73 -3.7 -5.36441 | opp_overlap 713644, overlap 713644 GATATATTTTATGCA AGAAGTGGT AATA ACCACTTTG TTTTTTATCTAGGAG TERM 1267 713644 - 713657 + H 90 -6.7 -5.16969 | opp_overlap 713644, overlap 713640 TATTTTATGCAAGAA GTGGT AATA ACCAC TTTGTTTTTTATCTA infC 713682 - 714284 + | translation initiation factor IF-3 TERM 1268 714322 - 714306 - g 70 -5.1 -4.74084 | opp_overlap 714307, overlap 714307 AAATGAAAACTAAAA GCGCTTT AAA AAAGCGT GTTAAAGTTACAGCA TERM 1269 714307 - 714321 + G 73 -8.6 -3.09492 | opp_overlap 714306 714307 AATGAAAACTAAAAG CGCTTT AAA AAAGCG TGTTAAAGTTACAGC TERM 1270 714321 - 714307 - g 75 -8.6 -3.4201 | opp_overlap 714307, overlap 714306 AATGAAAACTAAAAG CGCTTT AAA AAAGCG TGTTAAAGTTACAGC rpmI 714284 - 714472 + | 50S ribosomal protein L35 rplT 714492 - 714842 + | 50S ribosomal protein L20 TERM 1271 714856 - 714886 + T 89 -4.1 -6.11229 | opp_overlap 714843 714846 714862 AATAATTTTAAAAAT TAAAAACCACATC AATGC GATATGGTTTTTC TTTTTTTATTTTAGT TERM 1272 714880 - 714862 - T 84 -6 -5.18355 | opp_overlap 714856 TTTAAAAATTAAAAA CCACATCA ATG CGATATGG TTTTTCTTTTTTTAT MS53_0609 715935 - 714892 - | hypothetical protein metK 717080 - 715932 - | S-adenosylmethionine synthetase lysS 718685 - 717204 - | lysyl-tRNA synthetase TERM 1273 717624 - 717656 + g 88 -9.3 -4.26327 | overlap 717620 717626 ATTAGCGATATGTCC TACGGTGTAATATTT TTT AAGTTTTACACCGTG TTCTTTTGCTAGCTC TERM 1274 717626 - 717654 + g 86 -9.7 -3.72481 | overlap 717624 717620 TAGCGATATGTCCTA CGGTGTAATATTT TTT AAGTTTTACACCG TGTTCTTTTGCTAGC TERM 1275 718119 - 718160 + g 71 -3.9 -5.12617 | opp_overlap 718117 718129 718132, overlap 718117 718120 718123 718132 TTCAAGATACATATT TGAATCAAAATACTTTCTT ATTA AAGAAATTATTTTGCTACG TTTTTTAAATACTTC TERM 1276 718266 - 718294 + g 75 -3.3 -5.45802 | overlap 718266 718274 718290 TTTATCAGGAAGAGG TTTTAGCACTTTT GTT AAAAGTTTTAAAG TTTTTATTTTAACAA TERM 1277 718514 - 718544 + g 79 -4.9 -5.48213 | gap 1, overlap 718515 AATAAAGATCCATGC T-TTCTAGCTCTTC TTTA GAATAGCTAGAATA TTTTTCTTTTAAATC TERM 1278 718515 - 718542 + g 91 -10 -4.3613 | overlap 718514 ATAAAGATCCATGCT TTCTAGCTCTTC TTTA GAATAGCTAGAA TATTTTTCTTTTAAA MS53_0612 719568 - 718681 - | putative ABC transporter ATP-binding protein TERM 1279 719087 - 719113 + g 70 -8.2 -3.08508 | opp_overlap 719090, overlap 719085 719090 GTTAAAACATTATCA TAACCATTTAAA TTA TTTAAAAGGTTA TAGTTTTGGAAGATA MS53_0613 727748 - 719832 - | putative ABC transporter permease protein TERM 1280 722395 - 722381 - G 72 -5.8 -4.4768 | opp_overlap 722381 TATTAATAGAAGAAA TAATTG AGT CAATTA TTCTAACTCTTAATG TERM 1281 722470 - 722482 + g 70 -6.3 -4.1711 | CTTTGAATTTTAGCG CTATC ATC GATAG TTTCTTGAACGTAGT TERM 1282 723589 - 723618 + g 91 -10.3 -4.1897 | overlap 723608 TCACGAAACTCTGGA TATTTATCTGCAA GTTT TTGTAGATAAATA TTTGTGTATCTACTT TERM 1283 724503 - 724482 - G 70 -5.9 -4.27316 | TCCTGGAACTGAAAA TAAGGCTCT TAAA AGAGACTTA ACAACGTCTGCGTTA TERM 1284 725648 - 725662 + g 75 -7.2 -4.15833 | GAACAACGTCAGCAT TAACTC AGT GAGTTA TTTTGCCATCGTCAT TERM 1285 727756 - 727728 - G 100 -13.5 -4.09243 | opp_overlap 727733 727736, overlap 727733 TATATCCTTGGAAAA TAAAATAATTAGC AAC GCTAATTATTTTA AATATACAAATTAAG TERM 1286 727733 - 727751 + g 86 -9 -4.2349 | opp_overlap 727728 727733, overlap 727736 CCTTGGAAAATAAAA TAATTAGC AAC GCTAATTA TTTTAAATATACAAA TERM 1287 727751 - 727733 - G 95 -9 -5.07652 | opp_overlap 727733 727736, overlap 727728 CCTTGGAAAATAAAA TAATTAGC AAC GCTAATTA TTTTAAATATACAAA TERM 1288 727736 - 727748 + g 70 -6.3 -4.23999 | opp_overlap 727733 727728, overlap 727733 TGGAAAATAAAATAA TTAGC AAC GCTAA TTATTTTAAATATAC ftsH 729812 - 727803 - | cell division protein FtsH TERM 1289 728212 - 728233 + g 71 -4.5 -4.84914 | gap 1, opp_overlap 728212 728215, overlap 728207 728215 GTTGCCTTTTTAATA TCATCAGCTG CAC CAGTTGA-GA TTTTATTATCTCCAT MS53_0615 730795 - 729935 - | hypothetical protein TERM 1290 730353 - 730369 + g 77 -2.3 -5.82281 | ATTTTATTTTTTCTA CAAAATT TAC AAATTTG TTTTTTTGTGTATTT TERM 1291 730454 - 730425 - G 80 -5.2 -5.32396 | opp_overlap 730420 730428, overlap 730428 ATATCAAAAATAAAA GATCTTTTTTTA ATTCCA TAAAAAAAGTTC ATTTTATTTGATTCT pth 731363 - 730800 - | peptidyl-tRNA hydrolase recD 733585 - 731363 - | exodeoxyribonuclease V, alpha subunit TERM 1292 732140 - 732107 - G 84 -9.2 -4.01493 | opp_overlap 732103 732114, overlap 732103 732110 ATAAAACACATTAAA TAATTTACTTTCAA CAATAT CTGAAAGTAAATTA CCAGGTCCTATTGCA TERM 1293 732137 - 732110 - G 70 -6.5 -4.09503 | opp_overlap 732103 732114, overlap 732103 732107 AAACACATTAAATAA TTTACTTTCAA CAATAT CTGAAAGTAAA TTACCAGGTCCTATT TERM 1294 732598 - 732564 - G 70 -6.6 -4.03234 | opp_overlap 732554 TGTCCCTCAGACAAA GTCTTAGTTTCACT ATCAGGA AGTGAATCTAAAAC AATAGGATTTAGTGA TERM 1295 732806 - 732827 + g 86 -10.3 -3.30956 | opp_overlap 732805 732804 732809, overlap 732809 AGAATTTAATAAACG CAATTCAAC CGTG GTTGAATTG TTAGTAATTAGTTCT TERM 1296 734508 - 734524 + G 72 -7.3 -3.93695 | AAAACGGTGGAGTTG GGCATTG AAT TAATGCC TTTCTAGATAATCCA MS53_0618 733694 - 734608 + | hypothetical protein TERM 1297 734597 - 734618 + F 100 -6.7 -5.56568 | opp_overlap 734597 CTTTCAGTTCAAGAA TCAGATGAT TAAA ATCATTTGA TTTTTTTAATACTAT TERM 1298 734688 - 734678 - g 87 -2.6 -6.28967 | CAGAAATAAAAAAAA TTTA CGA TAAA AGTAAATTTGTTTTT TERM 1299 735328 - 735307 - g 95 -8.1 -5.48213 | gap 1, opp_overlap 735307 TATGGAAAAGAAAAA CTACCATTGG TAG CCAA-GGTAG TTTTCAAGTTTAAAG TERM 1300 735307 - 735328 + G 80 -8.1 -4.24002 | gap 1, opp_overlap 735307 TATGGAAAAGAAAAA CTACCATTGG TAG CCAA-GGTAG TTTTCAAGTTTAAAG rnhB 734647 - 735360 + | ribonuclease HII MS53_0620 736261 - 735350 - | hypothetical protein TERM 1301 736104 - 736084 - G 70 -7.7 -3.34894 | opp_overlap 736084 736086, overlap 736082 AATCTGCCTTAAACA CATCAAATA AAT TATCTGATG TTAAATCAACGCCAT TERM 1302 736646 - 736666 + G 76 -9.1 -3.06261 | opp_overlap 736644 736642 AAGTAGAAAAACACC CAAAAAGTG ATT CGCTTTTTG TGTTAAAGCTTGACG MS53_0621 736327 - 736926 + | hypothetical protein TERM 1303 737004 - 736985 - g 76 -4.4 -5.1963 | TCTAACGAAGAAAAA TTTTTAAG CCTA CCTAAAAA TAGTGGAGTATATGT TERM 1304 737284 - 737304 + G 73 -8.5 -3.0263 | opp_overlap 737281 CTATAAAGATATTTC TTTTTTAGA TTT TCTAAAAAA TATTGGAAAGCTAAT tyrS 736919 - 738154 + | tyrosyl tRNA synthetase TERM 1305 738204 - 738243 + T 70 -7.6 -3.56366 | gap 1, opp_overlap 738204 738207 738215, overlap 738207 738215 TTTTGTTTAATTTAA TAACAAAA-AAACCATT TGAAAAT AATGGTTTATTTTGTTA TTTCGGAAAATTATT TERM 1306 738231 - 738215 - T 77 -2.3 -5.95946 | opp_overlap 738207 738204 738215, overlap 738207 738204 TTAATAACAAAAAAA CCATT TGAAAAT AATGG TTTATTTTGTTATTT rplA 738952 - 738257 - | 50S ribosomal protein L1 TERM 1307 738913 - 738891 - G 70 -7.8 -3.4285 | opp_overlap 738881 TCATGCAAGTCATAA GCTTGATTTG CAT CAAATAAAGC ACGAACTTTTTGTTG rplK 739533 - 738952 - | 50S ribosomal protein L11 TERM 1308 739511 - 739498 - G 70 -5.3 -4.58395 | opp_overlap 739498 739487 TTTACCTGCTAAAAA TTGCA ATTT TGCAA CTTTTTGTACGTCTT rplO 740034 - 739591 - | 50S ribosomal protein L15 rpsE 740495 - 740040 - | 30S ribosomal protein S5 TERM 1309 740502 - 740519 + r 82 -7.1 -4.77778 | GTCTACAATTTTTTC TTCGTAT TCTG ATACGAA TTTTCTATCTTTATT TERM 1310 740757 - 740771 + r 80 -4.2 -5.48063 | overlap 740752 TGAGCTAGTAGCAGG CTTAGC GCT GCTTAG TTTTTTATCTTCCAT rplR 741136 - 740789 - | 50S ribosomal protein L18 rplF 741693 - 741151 - | 50S ribosomal protein L6 rpsH 742094 - 741702 - | 30S ribosomal protein S8 rpsN 742287 - 742102 - | 30S ribosomal protein S14 rplE 742850 - 742287 - | 50S ribosomal protein L5 TERM 1311 742623 - 742637 + g 74 -5 -5.02476 | GTTTTTACGTAACTT TCAAGC AGC GTTTGA TTTTTTAGCAACTGT rplX 743173 - 742847 - | 50S ribosomal protein L24 TERM 1312 743013 - 743035 + g 72 -5.6 -4.53047 | ACGCTTGTTAAATTT CCTTCTTGAT TTT GTTGAGAAGG TTTATTGTGTTTGGT rplN 743547 - 743182 - | 50S ribosomal protein L14 rpsQ 743837 - 743547 - | 30S ribosomal protein S17 rpmC 744031 - 743834 - | 50S ribosomal protein L29 rplP 744450 - 744031 - | 50S ribosomal protein L16 rpsC 745108 - 744428 - | 30S ribosomal protein S3 rplV 745449 - 745108 - | 50S ribosomal protein L22 rpsS 745727 - 745449 - | 30S ribosomal protein S19 rplB 746572 - 745727 - | 50S ribosomal protein L2 rplW 747110 - 746634 - | 50S ribosomal protein L23 rplD 747717 - 747112 - | 50S ribosomal protein L4 TERM 1313 747767 - 747777 + r 100 -5.4 -5.93252 | TCTTTTTCAGGAGTA GCTA CAC TAGC TTTTTTATTTTTAAC rplC 748610 - 747804 - | 50S ribosomal protein L3 TERM 1314 748344 - 748366 + g 72 -6.4 -4.41348 | opp_overlap 748344 AACACTTTGACCTAA TTCGTAAC CGTTCAT GTTACGAA TTTCTTTAACGAAGC rpsJ 748918 - 748628 - | 30S ribosomal protein S10 TERM 1315 749117 - 749087 - R 78 -2.7 -5.83226 | opp_overlap 749087 AATCTAACAAAAAAA TTCACAAAATTTT AGCTA AAAATAATGTGAA TTTTTTAAGTGTAAT TERM 1316 749134 - 749150 + r 70 -5.1 -4.57275 | opp_overlap 749134, overlap 749126 TTTTTAAGTGTAATA CGCCT ATTTTTC AGGCG TTTTCAATTTTTTTA trxA 749504 - 749163 - | putative thioredoxin TERM 1317 749476 - 749489 + g 76 -6.7 -4.47259 | TTTTTCACTAATTCT TGAGC TTCA GCTCA TTTTAATCTTGTAAT MS53_0646 751229 - 749520 - | hypothetical protein TERM 1318 750306 - 750319 + g 91 -3.9 -6.04324 | AAATAATTTAACAGC TTCAA TTTC TTGAA TTTTTTCTTTTTTAA TERM 1319 751144 - 751160 + g 76 -4.5 -5.18995 | opp_overlap 751144 CAGATAGAATAACTA GATTTTG TAT TAAAATC TTTTTCTATTCTCTT TERM 1320 751185 - 751199 + g 78 -7.2 -4.61162 | TCTCTTATACTTTTG GAGTTT AAA AAACTC TTTCTTGTTTAGTGT MS53_0647 752899 - 751226 - | hypothetical protein TERM 1321 751369 - 751397 + g 77 -6.1 -4.69656 | overlap 751368 TTTTTACGATTGTAG CTTTGATGAGCTT TTT AATATCATCAAAG TTTTCTTCGCTGGTT TERM 1322 751777 - 751795 + g 86 -9 -4.42788 | opp_overlap 751775 751777 751780 GGCGCAGCGCAAATA GAAGATTT GAT AAATCTTC TTTTGTAGGATTGGA TERM 1323 751795 - 751777 - G 79 -9 -3.38046 | opp_overlap 751777, overlap 751775 751780 GGCGCAGCGCAAATA GAAGATTT GAT AAATCTTC TTTTGTAGGATTGGA pyk 754335 - 752899 - | pyruvate kinase MS53_0649 755628 - 754405 - | hypothetical protein TERM 1324 754440 - 754454 + g 74 -6.4 -4.57073 | AGGCTTTTTCTTCTT CAGCTT TTA GAGCTG TTTTTGGCAGCGATA TERM 1325 755576 - 755544 - G 70 -5.5 -4.5115 | TAGAAAAAGCCAAAA CTGAAACGCCAACTG TCG CAGATAGAGTTGCAG TAGCAGATAAAAGCA engB 756193 - 755630 - | GTPase EngB TERM 1326 755703 - 755733 + g 100 -5.6 -5.96894 | opp_overlap 755703 755709 GAAACTATTAAGTAA TTAAAACTTTCCTT TTC AAGATAAGTTTTAA TTTTTTTATTTAGCT TERM 1327 755733 - 755703 - G 70 -7.8 -3.44222 | opp_overlap 755703, overlap 755709 GAAACTATTAAGTAA TTAAAACTTTCCTT TTC AAGATAAGTTTTAA TTTTTTTATTTAGCT MS53_0651 756617 - 756186 - | putative pantetheine-phosphate adenylyltransferase TERM 1328 756429 - 756447 + g 100 -6.8 -5.9663 | TAATAAAACTTCTAC GTTTTCAA ATT TTGAAAGC TTTTTTTTAGTATTT TERM 1329 756561 - 756527 - G 81 -8.2 -4.39954 | gap 1, opp_overlap 756527 756532 TAACAATAACATAAA CATAATC-AAAAAGC TTAACG GCTTTTTCGATTATG TTAATATGACCTTTA TERM 1330 756527 - 756561 + g 78 -8.9 -3.28708 | gap 1, opp_overlap 756527, overlap 756532 TAACAATAACATAAA CATAATC-AAAAAGCT TAAC GGCTTTTTCGATTATG TTAATATGACCTTTA ackA 757815 - 756619 - | acetate kinase TERM 1331 757397 - 757422 + g 78 -9.9 -2.52933 | opp_overlap 757410, overlap 757385 757396 TCAGCTGACATTTTA GCTTTTGGAAA TACT TTTTCAAAAGC CTTAATAGATTGAAC TERM 1332 757729 - 757680 - G 73 -8.8 -3.06796 | gap 1, opp_overlap 757680 CGTCATTGTATTTAA TGCTAATGTGACCTTCTGAAAGA CCAAT TCTTTCTGCAAGTC-CACTAGCA ATTGATTGCATAGAC eutD 758771 - 757812 - | phosphotransacetylase TERM 1333 758564 - 758584 + g 75 -8.4 -3.38314 | overlap 758561 CTACATATTTTTTAG TTTTTGCC TCGTC GGCAAAAA TATTTACAAATTCAA TERM 1334 759432 - 759420 - g 75 -7.7 -3.92373 | GAGTTTATTCACAAA CCGAT GTA ATCGG AGCTCAAATAGGATC gpsA 758891 - 759874 + | glycerol-3-phosphate dehydrogenase TERM 1335 759914 - 759866 - T 83 -8 -4.43879 | gap 1, opp_overlap 759872 759875 759884, overlap 759875 759884 759908 ACTAGGGAATTAAAA TCTGA-ATAATTAAAAAAATGCA ATTT TGCATTTTTTTAATTATCTTAAA GCCTCAAGATTTTTT TERM 1336 759872 - 759907 + T 100 -15.2 -3.03124 | opp_overlap 759866 759875 759884, overlap 759875 759884 GAATTAAAATCTGAA TAATTAAAAAAATGCA ATTT TGCATTTTTTTAATTA TCTTAAAGCCTCAAG TERM 1337 759875 - 759904 + T 100 -12.5 -3.66288 | opp_overlap 759875 759866 759884, overlap 759872 759884 TTAAAATCTGAATAA TTAAAAAAATGCA ATTT TGCATTTTTTTAA TTATCTTAAAGCCTC TERM 1338 759904 - 759875 - T 100 -12.5 -3.73106 | opp_overlap 759872 759875 759884, overlap 759866 759884 TTAAAATCTGAATAA TTAAAAAAATGCA ATTT TGCATTTTTTTAA TTATCTTAAAGCCTC TERM 1339 759895 - 759884 - T 82 -4.4 -5.71638 | opp_overlap 759875 759872 759884, overlap 759875 759866 GAATAATTAAAAAAA TGCA ATTT TGCA TTTTTTTAATTATCT TERM 1340 759884 - 759895 + T 82 -4.4 -5.69379 | opp_overlap 759884 759875 759866, overlap 759875 759872 GAATAATTAAAAAAA TGCA ATTT TGCA TTTTTTTAATTATCT trxM 760210 - 759905 - | thioredoxin TERM 1341 760355 - 760367 + H 78 -7.7 -4.44548 | opp_overlap 760354 760355 TAATATATAGAATAT GCGTA TTT TACGC TTTTAATTAAATATG pgm 760374 - 761885 + | phosphoglyceromutase MS53_0657 761909 - 762832 + | putative ABC transporter ATP-binding protein MS53_0658 762829 - 763908 + | putative ABC transporter TERM 1342 763938 - 763969 + F 100 -12.6 -5.38497 | gap 1, opp_overlap 763947 CCAAGTATTAGTTTT TGTAAAGAAGCGTCA ATA TGACGCTT-TTTACA TTTTTTAATTTAAGT TERM 1343 763961 - 763947 - f 88 -10 -3.90922 | opp_overlap 763938 AGTTTTTGTAAAGAA GCGTCA ATA TGACGC TTTTTACATTTTTTA TERM 1344 764287 - 764271 - g 100 -5.2 -6.25741 | AAATAAGAAAAAAAA TTGGAA TTATT TTCCAA AATCCAGATAATCAA MS53_0659 764033 - 764833 + | cobalt transporter ATP-binding subunit MS53_0660 764824 - 765759 + | cobalt transporter ATP-binding subunit MS53_0661 765752 - 766633 + | putative ABC transporter permease protein TERM 1345 766638 - 766660 + T 83 -4.9 -5.46698 | opp_overlap 766642, overlap 766642 TAATTAAATAAATAA AAAATAGGC CTTTT GCCTATTTA TTTTTTGCTTTTAAG TERM 1346 766656 - 766642 - T 100 -5.7 -5.85425 | opp_overlap 766638 766642 TAAATAAATAAAAAA TAGGC CTTTT GCCTA TTTATTTTTTGCTTT TERM 1347 766642 - 766656 + T 84 -5.7 -5.14819 | opp_overlap 766642, overlap 766638 TAAATAAATAAAAAA TAGGC CTTTT GCCTA TTTATTTTTTGCTTT MS53_0662 768407 - 766671 - | hypothetical protein TERM 1348 768202 - 768212 + g 73 -5.4 -4.8048 | opp_overlap 768202 768205 TGTTCTTTAACATAA GCAT CAA ATGC TTTTTGATCTACAAG ychF 769669 - 768572 - | translation-associated GTPase TERM 1349 770055 - 770038 - g 74 -2.1 -5.66868 | AATCAAGCAAAAAAA TTATCTT CAAT AAAATAA ATGAAATCTTTAAAG TERM 1350 770111 - 770097 - g 71 -2.8 -5.48623 | overlap 770098 AAAGATAAAGAAAAA GGTTTG CTA CAAACT AGAATTAAAGCCTTT TERM 1351 770484 - 770455 - g 76 -6.6 -4.47456 | opp_overlap 770474 770475, overlap 770475 ATAGCGAAGAAGAAA TTCTTGCAAATT TTGAAG AATATGCAAGAA TGCATAATTTTTATT rbgA 769725 - 770585 + | ribosomal biogenesis GTPase MS53_0665 771361 - 770582 - | hypothetical protein TERM 1352 770735 - 770771 + g 95 -4.8 -5.95449 | gap 1, opp_overlap 770735 AACTTCTTCTGGAAA CATATATAAATCTAAAT TAAA AATTAG-TTTATATATG TTTTTTGTTTTATTT TERM 1353 771251 - 771267 + g 70 -8.1 -3.03792 | opp_overlap 771249 771251, overlap 771250 TTTATAATATAAATA TTTCATC CTT GATGAAA CTTTATATAAGTAAT TERM 1354 771267 - 771251 - G 76 -8.1 -3.73486 | opp_overlap 771251 771250, overlap 771249 TTTATAATATAAATA TTTCATC CTT GATGAAA CTTTATATAAGTAAT TERM 1355 771287 - 771312 + g 75 -3.3 -5.52909 | opp_overlap 771287 ATATAAGTAATTAAA GCTTTCATTTT CGTT ATATTGAAAGC TTTTTTTAACTGTTA TERM 1356 771317 - 771329 + g 72 -3.5 -5.20333 | ATATTGAAAGCTTTT TTTAA CTG TTAAA TTTTTATTATCCATA MS53_0666 771379 - 772188 + | hypothetical protein TERM 1357 772464 - 772481 + G 70 -5.5 -4.52589 | GTAAAACCACTCTTA CAGCTGC TATT GCAACTG TTTTATCTAAAAAGG TERM 1358 773018 - 773006 - g 70 -6.3 -4.18167 | opp_overlap 773005 AAAGAACTAGACAAA CCATT CTT AATGG CTGTTGAAGACGTTT tufA 772379 - 773563 + | elongation factor Tu TERM 1359 773593 - 773609 + F 93 -6.6 -5.35354 | opp_overlap 773592 773593 ACAAAATAATAGAAG CTAGCA TCAAT TGCTAG TTTTTTCATTATATA TERM 1360 773828 - 773808 - g 84 -3.4 -5.88476 | opp_overlap 773808 773821, overlap 773797 773821 AAAATAAAGAAAAAA TATCTTTA GAAAA CAAAGATA TTTGCTTTTACTTTT MS53_0668 773645 - 773911 + | hypothetical protein MS53_0669 774203 - 774523 + | hypothetical protein MS53_0670 774560 - 774871 + | hypothetical protein TERM 1361 774877 - 774893 + T 100 -5.1 -5.90231 | opp_overlap 774880 AAATTTATAAATTAA TAGTGGC TTA GCCGTTA TTTTTTTGTCTTTAT TERM 1362 774938 - 774954 + T 76 -9.5 -2.77947 | opp_overlap 774938, overlap 774937 CATAAAAACAAAAAA CTTTAGC GAA GCTAAAG CTTTGAAAATTATTC TERM 1363 774954 - 774938 - T 100 -9.5 -5.98675 | opp_overlap 774938 774937 CATAAAAACAAAAAA CTTTAGC GAA GCTAAAG CTTTGAAAATTATTC TERM 1364 775465 - 775481 + T 78 -7.3 -4.4715 | opp_overlap 775462 GGGCAAGATAAGCCT GTTATCC CCA GGGTAAC TTTTATCCGTTGAGC TERM 1365 777378 - 777389 + T 77 -7.2 -4.2354 | AGAATCTATTTCACT CCCC TCTC GGGG TTCTTTTCACCTTTC TERM 1366 778149 - 778135 - T 76 -3.5 -5.56264 | opp_overlap 778148, overlap 778147 CCCAAAGACAAAAAA GCGAT ACACA ACCGC TTTTAGAATTTTTCT TERM 1367 778148 - 778172 + T 72 -7.3 -3.78329 | opp_overlap 778135 778147 AAGCGATACACAACC GCTTTTAGA ATTTTTC TCTAAAAGC TTTCAGTTAATAAAA TERM 1368 778255 - 778236 - T 78 -10 -2.56288 | opp_overlap 778236, overlap 778232 AAAGGAGGTAATCCA TCCCCACG TTCT CGTAGGGA TACCTTGTTACGACT TERM 1369 778289 - 778301 + T 72 -9.1 -2.62933 | CCCCAGTCACCGGTC CTGCC TTA GGCAG TCGTCTCCGAAGTTA TERM 1370 779514 - 779527 + T 73 -6.7 -4.1552 | CCCCGATCTCTTAGT GAAGC AAAC GCTTC TTTCTTAAAAAAATC TERM 1371 779533 - 779556 + T 71 -8.4 -2.88579 | CAAACGCTTCTTTCT TAAAAAAATC ATGC GATTTTTTTA TATATCCGGCATTAG MS53_0671 780528 - 779848 - | hypothetical protein MS53_0672 780672 - 780986 + | hypothetical protein TERM 1372 781941 - 781925 - g 83 -5.1 -5.62219 | overlap 781926 AAGAGAGCAAAAAAA CTGCACA ATC TGCGCAA AGTAATTTCGCGGCA MS53_0673 780979 - 782631 + | hypothetical protein TERM 1373 783082 - 783096 + G 70 -2.9 -5.24129 | ATTTATATCAATGAG CTTTA ATTGC TAAAG TTTTTTATCAAAAAA TERM 1374 783313 - 783337 + G 71 -8.7 -2.91322 | opp_overlap 783319, overlap 783319 GTGGTAATTTAGTTC TTAAAAGCTAC GAA GGAGCTTTTAA TACTTTCAAGCATCT plsX 782631 - 783608 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 1375 783865 - 783882 + G 74 -6.3 -4.46233 | opp_overlap 783865 AAGACTTAGATCAAA GCTAGTT GATA AACTGGC TTTATTTAAAATTGC rncS 783611 - 784306 + | dsRNA-specific ribonuclease III TERM 1376 784715 - 784734 + G 75 -7.9 -4.07133 | CATGGAAACCGGAAT TGGCAAG TCATCT CTTGCCA TTATTTCTCAAGGTA TERM 1377 785408 - 785422 + G 78 -8.6 -3.84246 | opp_overlap 785405 785403, overlap 785410 CAGCGAAAAATCTCA GCTTGA ATC TCAAGC TTTAATGCTTGAAAC TERM 1378 786194 - 786173 - g 71 -8.1 -3.25177 | CGTTAAAAAATTAGA GCTTTCATC TGAA AATGAAAGC ATAAGCGCTACTGAA TERM 1379 786455 - 786425 - g 70 -5.6 -4.30791 | AAGCAAACAAAAAGA TTTAGATAAACTTC GTC AAAGCTTTTCTAAA AACGAAGTTAAGTTT TERM 1380 787168 - 787147 - g 80 -6.5 -4.94902 | GAACCATGACAAAAA GTGACGCCA TAAT TGGTGCCAC TATGCAAAATAGAGG MS53_0676 784314 - 787256 + | putative ABC transporter ATP-binding protein P115-like TERM 1381 787254 - 787270 + F 100 -6.6 -5.58209 | opp_overlap 787254 787253 787256, overlap 787253 TTCGAAGCTCAAAAC TAGCCA TCGCT TGGCTA TTTTTTTGACTTTAA pyrH 787324 - 788043 + | uridylate kinase TERM 1382 788560 - 788546 - g 84 -5.8 -5.29885 | opp_overlap 788545 788546 AAGTCAAAAAGAAAA TTGAAA GAA TTTCAA CTTTAGCAAAAGAAA frr 788047 - 788601 + | ribosome releasing factor TERM 1383 788613 - 788630 + F 93 -4.9 -6.07969 | opp_overlap 788613 788616 TTAATAATTGAAAAA GAGGAAA TTAT TTTCTTC TTTTTTTTAATTTTC TERM 1384 789048 - 789059 + G 86 -4.4 -5.86976 | TTGCTGCGTCTCATA TTGC TGAA GCAA TTTTTTGTTTTGTCA MS53_0679 788647 - 789111 + | hypothetical protein TERM 1385 789127 - 789113 - T 84 -5.7 -5.20735 | TGAATAAAAAATAAA CCGTT ATTCA AACGG AACTTTATATATCTA MS53_0680 790493 - 789150 - | hypothetical protein TERM 1386 789250 - 789287 + g 75 -8.7 -3.40042 | TTTAAATTCAATTTT TTTGTTTTTTCTTCAAA GTAT TTTGTAGGAAAAGCAAA TTGATATCCTTTTTT TERM 1387 789567 - 789584 + g 70 -4.9 -4.65458 | opp_overlap 789566 789567, overlap 789540 AGATAAACTACAAAT TGATGGT TCAA ATCATCA TTTATTATTTATATG TERM 1388 789951 - 789967 + g 76 -6.6 -4.52747 | opp_overlap 789935 789950 ATAATTTAAGAAATT GTCAAG TTTTT CTTGAC TTGTTTTATCTTTTA TERM 1389 790049 - 790018 - G 71 -7.6 -3.53012 | opp_overlap 790017 790015 790018 790020 TTTTCTTTTTCTAAA TATGAAAATAGTTT TTCT AAATTATTTTCATA ATATTTAAATTTATA TERM 1390 790018 - 790049 + g 78 -9.8 -2.71089 | opp_overlap 790018, overlap 790017 790015 790020 TTTTCTTTTTCTAAA TATGAAAATAGTTT TTCT AAATTATTTTCATA ATATTTAAATTTATA sgaA-1 790988 - 790506 - | PTS system, IIA component MS53_0682 791265 - 790981 - | putative PTS system, IIB component sgaT-2 793012 - 791273 - | ascorbate-specific PTS system enzyme IIC TERM 1391 792445 - 792433 - G 71 -7.7 -3.51825 | CCACCGGAACCACAA CAGCA AAT TGCTG AAACATAACGTGTCC TERM 1392 792884 - 792857 - G 79 -5 -5.5604 | gap 1, opp_overlap 792862, overlap 792862 TGAATTAACAAAAAA TGCAA-TAGCTTC ACC GAAGCTATTTTCA TATTCATATATTCTT TERM 1393 792862 - 792878 + g 90 -9.5 -4.45399 | opp_overlap 792857 792862 TAACAAAAAATGCAA TAGCTTC ACC GAAGCTA TTTTCATATTCATAT TERM 1394 792878 - 792862 - G 84 -9.5 -3.57867 | opp_overlap 792862, overlap 792857 TAACAAAAAATGCAA TAGCTTC ACC GAAGCTA TTTTCATATTCATAT TERM 1395 793070 - 793082 + H 100 -6.3 -5.47399 | opp_overlap 793040 ATGCGCTTAATTTTA TGCAA TTT TTGCA TTTTTTTGAGCTTAA TERM 1396 793268 - 793305 + G 78 -9.3 -3.03151 | overlap 793260 793267 793270 TAGAATGCGTCCTGG GATGTATATCGGTTCTA AAGA TAAAACCGGTCTACATC ATTTAATTTGAGAAA gyrB 793173 - 795125 + | DNA gyrase subunit B TERM 1397 795169 - 795198 + F 79 -5.9 -5.06414 | opp_overlap 795159 795158 795170 795177, overlap 795158 795155 795170 795177 TTAACTTTTATACAA ATAAAAAAGTTGT TTAT GCAACTTTTTTAA TTTTTCTTGGAGAAA TERM 1398 795197 - 795170 - f 83 -8.7 -4.0492 | opp_overlap 795158 795155 795169 795170 795177, overlap 795159 795158 795177 TAACTTTTATACAAA TAAAAAAGTTG TTTATG CAACTTTTTTA ATTTTTCTTGGAGAA TERM 1399 795170 - 795197 + F 82 -9.4 -3.63367 | opp_overlap 795159 795158 795170 795177, overlap 795158 795155 795169 795177 TAACTTTTATACAAA TAAAAAAGTTGT TTAT GCAACTTTTTTA ATTTTTCTTGGAGAA TERM 1400 795190 - 795177 - f 73 -2.4 -5.76237 | opp_overlap 795155 795170 795169 795177, overlap 795170 TATACAAATAAAAAA GTTG TTTATG CAAC TTTTTTAATTTTTCT TERM 1401 795177 - 795190 + F 75 -3.1 -5.56112 | opp_overlap 795177 795170, overlap 795155 795170 795169 TATACAAATAAAAAA GTTGT TTAT GCAAC TTTTTTAATTTTTCT nusA 795222 - 796907 + | transcription elongation factor NusA TERM 1402 796938 - 796913 - f 71 -8.4 -3.01402 | opp_overlap 796912 796913, overlap 796916 AAAAAAATAACATTA CAAGAAAGTG CATTGT CACTTCCTTG ATTTTACCTGTTGAA TERM 1403 798492 - 798464 - g 70 -6.1 -4.23528 | GAAGCTAAAATTAAA GTTATTTCATCAA ACG TTGGTGATATAAC CGAAAATGATTTAAT infB 797159 - 798967 + | translation initiation factor IF-2 TERM 1404 799189 - 799177 - g 89 -6.3 -5.47218 | TTCCATTTAAAAAAA CCATT TGT AATGG TTAGAAAACCAAAAA apt 798967 - 799476 + | adenine phosphoribosyltransferase