TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.662562 %AT, 1520820 nt, 7275 terms. Intergenic: 0.68801 %AT, H2T: 137989 nt, 721 terms; T2T: 27688 nt, 587 terms; H2H: 28713 nt, 434 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|224372070|ref|NC_012115.1| Nautilia profundicola AmH, complete genome (length 1676444) TERM 1 141 - 128 - g 93 -5.3 -6.11229 | ACCAAAATAAAAAAA TCACT AAAA AGTGA AAACCTTGTGAATTA dnaA 101 - 1411 + | chromosomal replication initiator protein DnaA dnaN 1534 - 2586 + | DNA polymerase III, beta subunit gyrB 2620 - 4896 + | DNA gyrase, B subunit NAMH_0004 4905 - 5294 + | 7-cyano-7-deazaguanine reductase NAMH_0005 6494 - 5295 - | putative general secretion pathway protein F TERM 2 5365 - 5321 - G 74 -9.5 -3.12803 | overlap 5319 5330 TACTCATACTGAACA TAGGGAGAAGTATAGCAGTTA CTA TAAATCCTATACTTACCCCTA CAAATACTATTAAAG NAMH_0006 8005 - 6503 - | general secretion pathway protein E NAMH_0007 9744 - 8002 - | putative GspD TERM 3 8890 - 8914 + g 95 -2.9 -6.18768 | overlap 8875 8892 TAAAGAATTTGTTTC TTTATCTTCTG TAA TAGAAGGTATA TTTTTTTTGTATTTT TERM 4 8892 - 8912 + g 74 -5.5 -4.67703 | overlap 8875 8890 AAGAATTTGTTTCTT TATCTTCTG TAA TAGAAGGTA TATTTTTTTTGTATT NAMH_0008 10480 - 9731 - | hypothetical protein NAMH_0009 10952 - 10467 - | putative RNase L inhibitor TERM 5 10650 - 10661 + g 76 -4.4 -5.15634 | ATCTAAAATATTATG GCTT AAAT AAGC TTTTTTAATAAAATA NAMH_0010 11221 - 10949 - | putative valyl-tRNA synthetase NAMH_0011 12155 - 11304 - | hypothetical protein TERM 6 11912 - 11931 + g 83 -2.2 -5.95166 | overlap 11914 AATTAATAAATTTTT TGTCAATA TTTA TATTGATG TTTTTTTTAATTGCA NAMH_0012 12990 - 12133 - | hypothetical protein TERM 7 12631 - 12619 - G 72 -2.7 -5.27923 | TAAGTTTATAAAAAA TATAG GAT CCATA ATATTATAATATTGA TERM 8 13465 - 13477 + G 71 -7.7 -3.53563 | opp_overlap 13465 CTATGTTGCATGGAA TCGCA GGG TGCGA TTTGGCAAGCGATGT TERM 9 13680 - 13668 - g 74 -9.1 -3.11073 | overlap 13667 TATGCCACTGAAAAT CCGTC AAT GACGG GTACTACTGCATATT NAMH_0013 13116 - 14627 + | putative lipoprotein TERM 10 14629 - 14640 + F 86 -5.8 -5.45813 | opp_overlap 14629 AACCTCTTAAATAAA CTCC TTTT GGAG TTTTCTTTTTTGCTA TERM 11 14640 - 14629 - f 72 -5.8 -4.42464 | opp_overlap 14629 AACCTCTTAAATAAA CTCC TTTT GGAG TTTTCTTTTTTGCTA gspG 14678 - 15097 + | general secretion pathway protein G TERM 12 15303 - 15323 + G 82 -4.1 -5.40072 | TAAAACCCCGGTTGT TTATCAGTT TTT AAATGATAA TTTTTTTAAGAAAAA NAMH_0015 15193 - 15525 + | hypothetical protein TERM 13 15849 - 15835 - g 88 -7.2 -5.09245 | GTAAAAGTATAAAAA TCCTAT TAG ATAGGA TGAAAATATATAATA NAMH_0016 15522 - 15905 + | prepilin-type N-terminal cleavage/methylation domain protein NAMH_0017 15902 - 16384 + | prokaryotic N-terminal methylation motif domain protein NAMH_0018 16384 - 17724 + | putative thymidylate synthase NAMH_0019 17740 - 18126 + | putative CheA signal transduction histidine kinase, no good domain identification TERM 14 18263 - 18250 - g 72 -5.9 -4.33417 | CTCATTCAGAATAAA CCGCC ACAA AGCGG GACTTGAAGCGGTGG TERM 15 18306 - 18296 - g 74 -5.4 -4.8236 | GAGTTAAAAAAAGAA GGAT ACA ATCC TAAACCTGTGGAATG NAMH_0021 18143 - 19051 + | NOL1/NOP2/sun family protein NAMH_0020 19925 - 19038 - | putative lipoprotein NAMH_0022 20866 - 19925 - | putative lipoprotein TERM 16 20308 - 20294 - G 70 -4.3 -4.66987 | opp_overlap 20281, overlap 20281 CAGATTTGAATAAAA TCTTC TAAAT GAAGA ATCGTCTCTGTAATG NAMH_0023 21099 - 20866 - | hypothetical protein NAMH_0024 21890 - 21321 - | V-type ATPase, D subunit NAMH_0025 23205 - 21877 - | V-type ATP synthase beta chain TERM 17 22211 - 22221 + g 82 -5.4 -5.24129 | opp_overlap 22211 AATACATCTATAGGA GGAA ATA TTCC TTTTTTATGAAGAGA NAMH_0026 24922 - 23207 - | ATP synthase alpha/beta family, nucleotide-binding domain protein NAMH_0027 25422 - 24910 - | hypothetical protein NAMH_0028 25693 - 25400 - | ATP synthase (F/14-kDa) subunit NAMH_0029 25977 - 25690 - | V-ATPase F-subunit NAMH_0030 27667 - 25952 - | putative V-type ATP synthase subunit I TERM 18 26943 - 26922 - G 70 -4.5 -4.8143 | opp_overlap 26916 26922 TCAAGAATGTAAAAA CCGTTTT TTTCTTTT AAAACGG TTTTGATTTCGTAGA TERM 19 27537 - 27519 - G 71 -7.6 -3.63744 | GTTTTTTTTAAAAGA TTGTTTAT TTT ATAAACAA GGGGATGTTTTTTAC NAMH_0031 28424 - 27669 - | hypothetical protein TERM 20 27808 - 27778 - GR 72 -2.6 -5.3658 | opp_overlap 27778 ACCAGAAAAACAAAA GGTACGGATA GTTTAAAAGGA TATCCGAACC ATACTTTATTTAAAG TERM 21 28016 - 28000 - GR 87 -4.5 -5.73672 | overlap 27992 AAATAAGGAAAAAAA TCTTCAA TTT TTAAAGA ATAGATTATTTTATA TERM 22 28181 - 28197 + gr 70 -2.3 -5.27938 | overlap 28182 TGGAAAAAAACAGTG TGAAAAG TTC TTTTTCG TTTTTATTTAAAGGT TERM 23 28242 - 28273 + gr 71 -9 -2.54015 | opp_overlap 28243 28249, overlap 28234 28249 ATAAAGTTTTTTAAA ATGAAAATCTATAT CGTT ATATAGATTTTCAG GTGTTGTAAGAATTT TERM 24 28272 - 28243 - GR 100 -12.5 -4.10453 | opp_overlap 28234 28242 28249, overlap 28249 TAAAGTTTTTTAAAA TGAAAATCTATAT CGTT ATATAGATTTTCA GGTGTTGTAAGAATT TERM 25 28266 - 28249 - GR 74 -5.7 -4.67038 | opp_overlap 28242 28249, overlap 28243 TTTTTAAAATGAAAA TCTATAT CGTT ATATAGA TTTTCAGGTGTTGTA NAMH_0032 28708 - 28397 - | hypothetical protein coaE 29440 - 28871 - | dephospho-CoA kinase NAMH_0034 29955 - 29455 - | hypothetical protein NAMH_0035 30050 - 30268 + | hypothetical protein TERM 26 31074 - 31064 - g 74 -6.8 -4.28049 | overlap 31071 GTGAAAAGTGTAAAA CGGA AAA TCCG GGGCAGACTTTTGGG NAMH_0036 30319 - 31452 + | hypothetical protein fabZ 31469 - 31909 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 27 32185 - 32152 - g 88 -6.9 -5.03715 | overlap 32177 ATCACGGTGAAAAAA CTGAACTTATTATCG GTAA CAATAATAAAATCAG AGAATTTACGTTAAT lpxA 31926 - 32705 + | acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase TERM 28 32749 - 32737 - g 73 -9.1 -2.83601 | opp_overlap 32711, overlap 32726 32736 GAAACGGAAGACAAT CCGCT ATT AGCGG CGCCTGATGACAAAG clpX 32689 - 33912 + | ATP-dependent Clp protease, ATP-binding subunit ClpX NAMH_0040 33902 - 34927 + | cell shape determining protein MreB/Mrl TERM 29 35436 - 35416 - g 70 -3.9 -4.91977 | TAGGAAAAGATAAAA TCCCGGGAA TTT TTTACGGGA AAATAAATACAATAA NAMH_0041 34920 - 35675 + | putative periplasmic protein NAMH_0043 35703 - 36248 + | BdrA1 NAMH_0042 36943 - 36245 - | hypothetical protein TERM 30 36906 - 36886 - G 77 -9 -3.53343 | opp_overlap 36886 36885 AACTTTTTTTTGAAA TGGGAGGA TTATC TCCCCCCA GTGTTTTTCTTTCAC NAMH_0044 38337 - 36952 - | serine protease TERM 31 37149 - 37168 + g 72 -2.8 -5.23765 | overlap 37152 ATGTATTTGGGGCCA CTTTATCG ATTA CGATATGG TTTTTGTCTTCTTTA TERM 32 38145 - 38156 + g 76 -4.4 -5.15969 | ATTGTTCAGGTATTT TGGT TTTT ACCA TTTTTTCGGTTGAAA TERM 33 38538 - 38522 - g 73 -3.7 -5.1764 | GATATAATAGAAAAA GCCAA AGCCGAA TTGGC AAGAAGAAGGGAAGG NAMH_0045 38471 - 38866 + | hypothetical protein ribE 39636 - 39031 - | riboflavin synthase, alpha subunit NAMH_0047 40570 - 39629 - | tRNA-dihydrouridine synthase B TERM 34 39989 - 40000 + gr 100 -7.2 -5.99154 | TACGGGGATTTTTAC GGCG TTTA CGCC TTTTTTTATTTCATC NAMH_0048 41468 - 40545 - | hypothetical protein NAMH_0049 41828 - 41475 - | transcriptional regulator, TraR/DksA family NAMH_0050 42910 - 42215 - | thiamine monophosphate synthase TERM 35 42778 - 42791 + g 71 -3.1 -5.07275 | overlap 42777 GACGCTCTTTTTTTT CTTCT AAAG AGGAG TTTTTGTCTCTGTAC accD 43868 - 43020 - | acetyl-CoA carboxylase, carboxyl transferase, beta subunit NAMH_0052 44561 - 43872 - | inositol monophosphatase family NAMH_0053 45292 - 44558 - | thiol:disulfide interchange protein pyrF 45984 - 45292 - | orotidine 5'-phosphate decarboxylase TERM 36 45550 - 45576 + g 83 -7.4 -4.6951 | opp_overlap 45558, overlap 45556 GTCAAGCCCCGCTTC GTGAGAGAGTTT TGC AAACTCTTTTGC TTTATTTTCGATACT TERM 37 45556 - 45570 + g 83 -7.2 -4.76478 | opp_overlap 45558, overlap 45550 CCCCGCTTCGTGAGA GAGTTT TGC AAACTC TTTTGCTTTATTTTC dcd 46541 - 45981 - | deoxycytidine triphosphate deaminase NAMH_0056 46657 - 46911 + | hypothetical protein accB 46921 - 47376 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 38 47610 - 47622 + G 72 -4.8 -4.66163 | overlap 47619 GTGTGACGCTATATT TCCG GGTTA CGGA TTTTTGAGTGAAAAT accC 47377 - 48711 + | acetyl-CoA carboxylase, biotin carboxylase NAMH_0058 49429 - 48695 - | hypothetical protein NAMH_0061 49717 - 50637 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding NAMH_0060 51434 - 50634 - | MscS Mechanosensitive ion channel NAMH_0062 52171 - 51479 - | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain protein rnhB 52771 - 52181 - | ribonuclease HII NAMH_0064 53712 - 52747 - | hypothetical protein TERM 39 52918 - 52900 - G 73 -8.2 -3.53012 | CTCTTCGTTTGCAAA CGGCATAA CCA TTATACCG AGCTCTTTATTTGGA NAMH_0065 54787 - 53741 - | putative MFS metabolite transporter NAMH_0066 55181 - 54777 - | histidine triad (HIT) protein pyrE 55792 - 55181 - | orotate phosphoribosyltransferase TERM 40 55757 - 55740 - G 71 -3.3 -5.07652 | opp_overlap 55740, overlap 55741 CTGCTTAAAAGAAAA TGCCCCT TTAA AAGGGCG CCGTATTTTTCGTAT frr 56372 - 55818 - | ribosome recycling factor TERM 41 55996 - 56006 + g 76 -6.8 -4.58283 | CTGATGTTTCTGATT GCGA TTT TCGC TTTTTCAGCAAATTC NAMH_0069 57295 - 56372 - | putative polysaccharide deacetylase NAMH_0070 57618 - 57295 - | protein-export membrane protein SecG NAMH_0071 57672 - 58328 + | putative methyl transferase TERM 42 58647 - 58623 - g 100 -10.1 -4.4836 | opp_overlap 58617, overlap 58617 58616 GAATAAAACTTAAAA GGGTTTCTTTT AAA AACAGAAACCC GTACAATTATCCAAA TERM 43 58931 - 58920 - g 89 -3 -5.80248 | opp_overlap 58920 CAATAGATAAAAAAA GTTT GAAA AAAC ATTTGAATAAATTGT NAMH_0072 58361 - 58960 + | hypothetical protein TERM 44 58994 - 59010 + T 89 -12.3 -2.62616 | overlap 59001 TCGAACCCCTGACCA CCACGCT GCC AGCGTGG TGCTCTACCAGCTGA NAMH_0074 59425 - 59027 - | thiamine-phosphate pyrophosphorylase NAMH_0075 60158 - 59415 - | integral membrane protein NAMH_0076 62466 - 60253 - | TPR domain protein TERM 45 61458 - 61477 + g 70 -3.6 -4.88918 | opp_overlap 61458 AAAGATCGTAAAAAT CTTCTTTA TGTT TCAAGAAG TTTTCTTTAAAATAC TERM 46 61798 - 61810 + g 86 -2.7 -5.80951 | TAACCTGTTGGATTC TTCTT TAT AAGGA TTTTTTGTTTTAAGT serS 63725 - 62475 - | seryl-tRNA synthetase TERM 47 63678 - 63696 + g 76 -7.6 -3.90048 | overlap 63676 63677 TTTTAATTTAAGGCG TTTTGAAA CGT TTTCAAAA TCTTTTTCCAGCAGC TERM 48 63940 - 63922 - g 70 -2.4 -5.252 | opp_overlap 63923 63924, overlap 63924 CATTTGGACAAAAAA CACTTGAT GGT ATCAAGCT TGTTCATGAAAAATA TERM 49 63938 - 63924 - g 75 -7.2 -4.25873 | opp_overlap 63924 63923, overlap 63922 TTTGGACAAAAAACA CTTGAT GGT ATCAAG CTTGTTCATGAAAAA NAMH_0078 63798 - 64937 + | high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein TERM 50 64964 - 64993 + F 82 -5.1 -5.39905 | opp_overlap 64964 TTTCGGGAGTAAAAA CATTAAACGGCAT TATG GTGCTTTTTAATG TTTTTATTATTTAAT NAMH_0079 65020 - 66696 + | diguanylate cyclase (GGDEF) domain protein NAMH_0080 66686 - 67102 + | chemotaxis sensory transducer NAMH_0081 67104 - 68018 + | abc transport system permease protein TERM 51 68916 - 68936 + G 70 -8.3 -3.25223 | AAGTGTTGAGACCTC TTGACGACG CAA CGTGGTCAA TTGGTCCTGTGCATG NAMH_0082 68021 - 69073 + | abc transport system permease protein TERM 52 69203 - 69182 - g 73 -8.7 -3.25207 | TCAAACTACAAGAGA CGCAACACT TGCA AGTGGTGCG GAAATGATTACTGTT thiG 69090 - 69869 + | thiazole biosynthesis protein ThiG TERM 53 69871 - 69894 + F 100 -9.6 -5.1417 | opp_overlap 69876, overlap 69876 TAATAGAGTTTTAAT TATAAGCGGG GATT CCCGCTTTTA TTTTTGATTTTATAA TERM 54 69876 - 69889 + F 100 -9.5 -5.36689 | opp_overlap 69876, overlap 69871 GAGTTTTAATTATAA GCGGG GATT CCCGC TTTTATTTTTGATTT TERM 55 69889 - 69876 - f 80 -9.5 -3.51329 | opp_overlap 69876 69871 GAGTTTTAATTATAA GCGGG GATT CCCGC TTTTATTTTTGATTT NAMH_0085 69993 - 70757 + | hypothetical protein NAMH_0084 71794 - 70751 - | ggdef domain protein TERM 56 71950 - 71969 + r 71 -6.6 -4.04206 | CACCCACCTCTCCAT TTATTGTT TATA AACAATAA TTTATCTGGGAATGG pckA 73993 - 72416 - | phosphoenolpyruvate carboxykinase (ATP) TERM 57 72543 - 72586 + g 76 -6.8 -4.49756 | opp_overlap 72583, overlap 72539 72538 72545 72584 TTTTTGTCTTCCCAA GTGTTTCTTGGATTTAATAC CTCA GTATTTACTCCAGGAAGCTC TTTTGGTATTTGAAG TERM 58 72545 - 72584 + g 75 -8 -3.85133 | opp_overlap 72583, overlap 72539 72538 72543 TTTGTCTTCCCAAGT GTTTCTTGGATTTAATAC CTCA GTATTTACTCCAGGAAGC TCTTTTGGTATTTGA TERM 59 72584 - 72618 + g 86 -10.2 -3.66356 | opp_overlap 72583, overlap 72543 ATTTACTCCAGGAAG CTCTTTTGGTATTTGA AGT TCAAATACAGGAAGAG TTTCAAATTCAGCAT TERM 60 73397 - 73408 + g 79 -4.4 -5.37593 | CCAGTAATTCATCAT GGTA AATA TACC TTTTTTCATTTCGCC NAMH_0091 74334 - 74122 - | hypothetical protein NAMH_0092 75540 - 74344 - | cytochrome bd oxidase subunit II NAMH_0093 77114 - 75540 - | cytochrome D ubiquinol oxidase subunit I NAMH_0094 77346 - 77116 - | hypothetical protein TERM 61 77504 - 77490 - RH 88 -7.1 -5.01732 | opp_overlap 77489 AATTTTTGTAAAAAA GCCCT AAAAA AGGGC AATTTAAGAGAAAGA NAMH_0095 77912 - 77526 - | hypothetical protein TERM 62 77986 - 77960 - gH 95 -6 -5.84432 | opp_overlap 77960, overlap 77967 TATAACAGAAAAAAA GAAAAAAGACAA ATT TTATCTTTTTAC TTAAATACTCAATTG TERM 63 77979 - 77967 - gH 91 -2.7 -6.12458 | opp_overlap 77960, overlap 77960 GAAAAAAAGAAAAAA GACAA ATT TTATC TTTTTACTTAAATAC rnhA 77906 - 78448 + | RNase H TERM 64 78687 - 78697 + G 71 -6.8 -4.16837 | opp_overlap 78687 78686, overlap 78689 GATAGGTCTTGAAAT GGCT AAA AGCC TTGTTTATAGTTATA NAMH_0097 78448 - 79224 + | putative signal transduction protein rnc 79214 - 79894 + | ribonuclease III TERM 65 80386 - 80366 - g 82 -9.7 -3.53012 | GCTCTGCGCGTGAAA CCGCCGCAA GGG TTGCAGCAG GTGCGGTTGCTAAAA aroC 79978 - 81051 + | chorismate synthase TERM 66 81059 - 81076 + T 95 -5.5 -6.4275 | opp_overlap 81057 81059 ATCAGTAAATATATA CGGCC AGCCATAC GGCCG TTTTTTTTGTTTTTA NAMH_0099 81353 - 81045 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 67 81137 - 81125 - G 71 -3.3 -5.1356 | TTGCAGGAATAAAAA GCCAA TCT CCGGC TTTTAGTTTTTTAAT NAMH_0101 81964 - 81350 - | hypothetical protein NAMH_0102 82033 - 82254 + | hypothetical protein moaE 82285 - 82719 + | molybdopterin converting factor, subunit 2 TERM 68 83745 - 83735 - g 86 -5.4 -5.63857 | AAAAATTCAAAAAAA CACA GTT TGTG GCAGTTAATGTTTCT NAMH_0104 82729 - 83916 + | molybdopterin binding domain protein NAMH_0105 83944 - 84465 + | hypothetical protein NAMH_0106 84542 - 84991 + | hypothetical protein TERM 69 84979 - 84996 + F 77 -4.1 -5.38497 | AGAAAGAATTTTAGA CCTGACT TTAT AATCAGG TTTTTTCCTTTCACT nspC 85230 - 86345 + | carboxynorspermidine decarboxylase NAMH_0107 88305 - 86326 - | putative FOG: EAL domain protein TERM 70 88217 - 88201 - G 100 -9.5 -4.76423 | TATAAAGATATAAAA CAGCATT AAA AATGCTG TAAAAATAATAAAAG TERM 71 88343 - 88356 + r 93 -6.7 -5.38839 | opp_overlap 88342 88343 GGAATTATATCAAAT GTTGC AATC GCAAC TTTTATTTTTATATG NAMH_0109 90416 - 88365 - | cyclic diguanylate phosphodiesterase (EAL) domain protein TERM 72 90377 - 90396 + g 76 -3.7 -5.31456 | opp_overlap 90374 90384, overlap 90374 90374 90377 CTTGTAATGTAACTA TAAAAAG TAAAAT CTTTTTA TTTTTTATAAGTTCG TERM 73 90635 - 90622 - g 84 -3.9 -5.68489 | GAGAACAATAAAAAA CTTTT TGGG AAAAG AGTATGAAGTTGTTG TERM 74 91399 - 91389 - g 71 -5.4 -4.52873 | overlap 91386 GTCCGAGAAAAACAA TGCA GAT TGCA CAGAAGCTTTATGAA topA 90566 - 92752 + | DNA topoisomerase I NAMH_0111 92762 - 93286 + | phosphodiesterase bioB 93288 - 94118 + | biotin synthase TERM 75 94622 - 94632 + G 86 -5.4 -5.61881 | opp_overlap 94622 AACTTCTTTTTAATA TAGG AAT CCTA TTTTTATTTTTAGCG NAMH_0114 94108 - 95247 + | sodium/hydrogen exchanger NAMH_0113 95690 - 95238 - | putative hemerythrin HHE cation binding domain subfamily TERM 76 96568 - 96556 - g 76 -7.7 -3.95375 | overlap 96554 ATGGAATACAAAAGA GAAGG GTA CCTTC CGGAAGCTCTTTTAA TERM 77 96775 - 96763 - g 71 -6.3 -4.23007 | opp_overlap 96763 96762 96755 GAGAGAATCGTAAAA CTTCT AAA AGAAG ATTTCGGTGTTGATA TERM 78 96893 - 96879 - g 72 -5 -4.82667 | TGAGGAGATTAAAAA GATGTT ATC AACACC TGCCGAGTATAATGA gltX 95809 - 97194 + | glutamyl-tRNA synthetase TERM 79 97183 - 97199 + T 100 -9.5 -5.45726 | overlap 97171 CTGCTCGCAAACTTC GAGGTTT TTT AAACCTC TTTTTTTAGCATATA NAMH_0115 98324 - 97191 - | putative amino acid transporter TERM 80 98267 - 98281 + g 75 -10 -2.74012 | opp_overlap 98264 98262 98265 GTACGATAAACACGC CGCTTC CAA GAAGCG TAATTACGATAGTGG TERM 81 98721 - 98709 - g 73 -9.1 -2.95307 | overlap 98703 98708 GAATATATAGCAAAG CCGCA TTT TGCGG GGGCGGTTGAGAGGA TERM 82 99138 - 99128 - g 79 -5.4 -5.12707 | GGAAATTTTAAAAAA CTTC AGT GAAG AGAATGTTTATGCGG NAMH_0117 98412 - 99230 + | helix-turn-helix protein TERM 83 99311 - 99284 - g 79 -4.2 -5.35222 | overlap 99286 AAAATTTAGAAAAAA CTCTGAAAAATT GATA AATATTTCAGGG ATAAAGAATGAAAAA NAMH_0118 99258 - 100157 + | integral membrane protein DUF6 NAMH_0119 100223 - 101179 + | putative secreted protein NAMH_0120 101176 - 101658 + | hypothetical protein TERM 84 102120 - 102098 - g 84 -6.2 -5.31275 | overlap 102100 GGTTATGACAAAAAA CTGGCAATAG GGT CTCTTGCCGG AAGCGGGACACTCGG NAMH_0121 101648 - 102982 + | trap dicarboxylate family transporter, dctm subunit NAMH_0122 102979 - 103698 + | LamB/YcsF family protein NAMH_0123 103695 - 104351 + | allophanate hydrolase subunit 1 superfamily TERM 85 104663 - 104650 - g 82 -5.3 -5.32396 | overlap 104645 ATAGTAAAAATAAAA CCTTT AAAA AAAGG AAATTTCGTATACTT NAMH_0125 104344 - 105246 + | allophanate hydrolase subunit 2 NAMH_0124 107174 - 105243 - | penicillin-binding protein 1A (PBP-1a) (PBP1a) TERM 86 106402 - 106414 + g 80 -2.7 -5.626 | ACCGCGTACGGCGCC TGGTT TTG AATCA TTTTTTTATAAACTA TERM 87 106816 - 106832 + g 77 -5.1 -5.03747 | AGCTGCTGTGTGATT GTGGAAG CAC CTTCGAC TTTTTTACCGGCTTT NAMH_0126 108234 - 107176 - | 8-amino-7-oxononanoate synthase TERM 88 107266 - 107285 + g 89 -11.4 -3.37761 | overlap 107268 CGGGGATTGTACGGT TGGGGGCC TTAT GGCCCCTA TTAGTATGTTGCGGT TERM 89 107268 - 107283 + g 89 -11.8 -3.25475 | overlap 107266 GGGATTGTACGGTTG GGGGCC TTAT GGCCCC TATTAGTATGTTGCG TERM 90 107657 - 107669 + g 72 -9.1 -2.53905 | opp_overlap 107655 107656, overlap 107656 TTTTCACCAAGAACC CCCAC GCT GTGGG CTTCATCGATTATAA TERM 91 108246 - 108279 + H 85 -8.3 -4.45083 | opp_overlap 108263, overlap 108248 ACATTATTGTTTTGA GACCTTTTTTGTTAA AATT TTATCAAAAAAGGCC TTTTATGGATATAAG TERM 92 108248 - 108277 + H 74 -9.5 -2.55459 | opp_overlap 108263, overlap 108246 ATTATTGTTTTGAGA CCTTTTTTGTTAA AATT TTATCAAAAAAGG CCTTTTATGGATATA TERM 93 109864 - 109853 - g 74 -3 -5.24989 | overlap 109845 GTAGATACCAAAAAA TTTG ATGA CAAA AACTTAAGCAAAGTC alaS 108284 - 110845 + | alanyl-tRNA synthetase TERM 94 110845 - 110863 + F 74 -7.4 -4.08767 | opp_overlap 110847, overlap 110847 AGATTTAATTAAATA AAGAGGTG ATT CACCTCTA TTTTAAAAGGATGAG TERM 95 110847 - 110861 + F 86 -10 -3.6422 | opp_overlap 110847, overlap 110845 ATTTAATTAAATAAA GAGGTG ATT CACCTC TATTTTAAAAGGATG TERM 96 110861 - 110847 - f 93 -10 -4.57304 | opp_overlap 110847 110845 ATTTAATTAAATAAA GAGGTG ATT CACCTC TATTTTAAAAGGATG TERM 97 110951 - 110937 - g 80 -2.8 -5.76949 | overlap 110939 GAGTTTTAAAAAAAA CATTAG AAG CTAAGG GATATGAAGTTCATC NAMH_0128 110882 - 111562 + | two component transcriptional regulator, winged helix family NAMH_0129 111549 - 113405 + | putative two-component sensor TERM 98 113627 - 113609 - g 71 -3.2 -5.13521 | opp_overlap 113609 AAAGCATGTAAAAAA TGTTTTGA AAA TGAAAACA TTGTTTCTGCCGATA maf 113441 - 113998 + | septum formation protein Maf TERM 99 114343 - 114353 + G 72 -8.2 -3.35542 | overlap 114342 ATATGGTTGTAAGTG CGGC AAT GCCG ATTTTTAACGATAAA NAMH_0131 113988 - 114884 + | putative general glycosylation pathway protein PglG TERM 100 115280 - 115267 - g 74 -6.7 -4.38712 | TGCAGGGGCATAAAA TCCCA CATA TGGGA TGGAATAAGATGTTT hisH 114912 - 115517 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit hisA 115527 - 116234 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase NAMH_0134 116466 - 116843 + | chemotaxis response regulator TERM 101 116863 - 116897 + G 95 -8.8 -5.14563 | opp_overlap 116863, overlap 116864 TATTATGAGACTACA GTTTCGGTTTCATCTT TTA AAGATGAAATTGAAAA TTTTTTAATGGAACA TERM 102 116864 - 116896 + G 95 -12.3 -3.68256 | opp_overlap 116863, overlap 116863 ATTATGAGACTACAG TTTCGGTTTCATCTT TTA AAGATGAAATTGAAA ATTTTTTAATGGAAC prmA 116833 - 117657 + | ribosomal protein L11 methyltransferase TERM 103 117798 - 117762 - g 75 -9.6 -2.58663 | overlap 117761 117764 AGTTATTTTTAGAAG TATAGCACCTACTGCA ACAGG TGAAGTAAGCGCTATA GTAAACGGTAAACAG TERM 104 118349 - 118359 + G 76 -6.8 -4.62471 | CCGTGGCTGGTGAAG CGGA TGT TCCG TTTTTCGCAGTTAGC NAMH_0136 117658 - 119580 + | HpFtsH NAMH_0137 119558 - 120196 + | putative phosphatidylserine decarboxylase homolog TERM 105 120415 - 120432 + G 82 -4.1 -5.45813 | overlap 120418 ACATTGTGGCGTTTG GTGTTGC ACCG GCAATGC TTTTGTTTTTTGCTA NAMH_0138 120186 - 120893 + | CDP-diacylglycerol--serine O-phosphatidyltransferase leuA 120968 - 122518 + | 2-isopropylmalate synthase engA 122537 - 123922 + | ribosome-associated GTPase EngA NAMH_0141 123909 - 124712 + | hypothetical protein TERM 106 125412 - 125398 - g 70 -7.1 -3.80651 | opp_overlap 125397 AATTAAAAAAACAGA TCCGG GACAT CCGGA AGTTTGTATAGTTTT TERM 107 125640 - 125627 - g 71 -3.1 -5.03227 | opp_overlap 125627 ACAGGAGAAAGAAAA GCAAA AGAA CTTGC TTCTAAAAAAATGGA trpS 124709 - 125680 + | tryptophanyl-tRNA synthetase NAMH_0143 125690 - 125923 + | hypothetical protein purM 125923 - 126912 + | phosphoribosylformylglycinamidine cyclo-ligase psd 126909 - 127697 + | phosphatidylserine decarboxylase TERM 108 127860 - 127842 - gf 82 -7.5 -4.61231 | opp_overlap 127841 GCACAGGCGGAAAAA CTTCTTG AAAAA CAAGAAG CCTTTGAAGCGCTAA NAMH_0146 127713 - 128258 + | pdp protein TERM 109 128667 - 128699 + GT 100 -11.5 -4.12188 | opp_overlap 128685 128695 GCATGAAAAACTGAT TCCGTATTTTGTGGA AAC TTCACAAAATGTGGA TTTTGCCACTGGTAG NAMH_0148 128230 - 128940 + | hypothetical protein NAMH_0147 130333 - 128930 - | ggdef domain protein NAMH_0149 131304 - 130327 - | hypothetical protein TERM 110 131039 - 131056 + g 82 -5.7 -5.38348 | opp_overlap 131037 131039 TCAAATGTTACAACA TATTGAT ATTT ATCAATA TTTTTTAATATTTTT TERM 111 131395 - 131363 - H 90 -9.5 -4.19506 | opp_overlap 131371, overlap 131371 ATGGGAATTTTAAAA TTATAAAAGAACAAA TAT TTTTTTCTTTTATAA AAATTAAGACTAACC TERM 112 131652 - 131636 - g 70 -3.7 -4.91778 | overlap 131648 GAAATAGAAAATAAA GCAAG AGAAATA CTTGC ACAACAAGAAGAAGA NAMH_0150 131471 - 132028 + | hypothetical protein TERM 113 132819 - 132833 + G 71 -8.6 -3.09749 | opp_overlap 132819 132818 TGCTTGATGCAAAAG TTCCGA TGT TCGGAA TCTGTCTTGGACATC TERM 114 132833 - 132819 - g 71 -8.6 -3.10597 | opp_overlap 132819, overlap 132818 TGCTTGATGCAAAAG TTCCGA TGT TCGGAA TCTGTCTTGGACATC carA 132038 - 133159 + | carbamoyl-phosphate synthase, small subunit TERM 115 133223 - 133235 + G 74 -9.1 -2.9632 | overlap 133222 TTTTATTCTTTTTGT GGCGA TTT TCGCC CTTGTTTCCACATTT NAMH_0153 133188 - 133340 + | hypothetical protein NAMH_0152 134122 - 133337 - | putative undecaprenol kinase TERM 116 134484 - 134463 - g 85 -6.7 -5.28826 | AAAGTTTATAAAAAA CAATCCTTT TAAT AAAGAATTG AATATCCAAGAACTG TERM 117 134886 - 134896 + G 71 -5.4 -4.62069 | opp_overlap 134886 AAATGATAAAAAAAA GATC TTA GATC TTTTTAAGATGGGGG TERM 118 134896 - 134886 - g 93 -5.4 -6.04378 | opp_overlap 134886 AAATGATAAAAAAAA GATC TTA GATC TTTTTAAGATGGGGG NAMH_0155 134182 - 134943 + | glycerophosphoryl diester phosphodiesterase NAMH_0154 135746 - 134931 - | exonuclease family TERM 119 138403 - 138377 - g 86 -10.2 -3.55487 | opp_overlap 138374 CGAGAGCAAGTAGAA CGGTACCTTTCG TAT CAAAAGCTACCG GGCTTCCTTTGGCAA carB 135853 - 139125 + | carbamoyl-phosphate synthase, large subunit TERM 120 139107 - 139128 + F 77 -4.5 -5.23943 | AGTTAAATCTATCCA GGATTACTT CAAA AATTAATCC TTTCTTTTTTTCATA TERM 121 139938 - 139923 - f 77 -9 -3.32819 | CACAGAGGGGGATAA CACACC GAAA GGTGTG CTAATACCGCATACA TERM 122 141210 - 141190 - f 70 -8.1 -3.07895 | overlap 141188 GGTATCCCTAAGATA GGGGCCGCC TAC GGTGGACCC GGCGACTGGGGTGAA TERM 123 141259 - 141240 - f 72 -9.2 -2.65808 | opp_overlap 141243 141246, overlap 141237 141252 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 124 141598 - 141558 - f 74 -7 -4.29928 | opp_overlap 141558 141572, overlap 141565 AATGAAGAGTGAAAA GTGAAAAGTTAAGAGTGT GAGAG ACACTTTTAGCTTTACAC TTTTAGAGAGTGTAA TERM 125 141558 - 141598 + F 100 -11.4 -4.10657 | opp_overlap 141558 141565, overlap 141572 AATGAAGAGTGAAAA GTGAAAAGTTAAGAGTGT GAGAG ACACTTTTAGCTTTACAC TTTTAGAGAGTGTAA TERM 126 142149 - 142137 - f 70 -6.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGTGA GGGG AGTGAAATAGAACCT TERM 127 143258 - 143248 - f 78 -6.8 -4.36914 | opp_overlap 143248 143247 GTCGTGCCGAGAAAA GCCT CTA AGGC GTTTGAGCTATTAGT TERM 128 143905 - 143881 - f 87 -11.4 -3.14344 | opp_overlap 143895 TATCCTGCCTACTAA CCCGCAGCAG TAATC CTGCTGGGGG ACAGTGCCTGGCGGG NAMH_0164 145263 - 146084 + | hypothetical protein NAMH_0165 146081 - 146503 + | hypothetical protein TERM 129 146629 - 146613 - f 74 -9.5 -2.62396 | opp_overlap 146597 CAGTTGGCTAGAGCA GCTGATT TGT AATCAGC AGGTCGGGGGTTCGA TERM 130 147004 - 146988 - f 74 -9.5 -2.62983 | opp_overlap 146979 146977 CTCAGTGGCAGAGCA CTTCCTT GGT AAGGAAG AGGTCGCCGGTTCAA TERM 131 147027 - 147060 + F 100 -11.9 -3.88559 | CGGTTCAATCCCGGC TATGGGCTCCAGCAA GGCC TTGTTGGAGTTCATA TTTATAGAGCTAATT TERM 132 147298 - 147277 - g 76 -4.5 -5.05606 | overlap 147273 147280 CTGAAGAAAAAGAAA GAGGTATTA CTAT TAATACATC TCACGTTGAATATGA tuf 147102 - 148301 + | translation elongation factor Tu TERM 133 148299 - 148315 + F 79 -6.6 -4.58395 | opp_overlap 148291 148299 ACTAAAATTATCGAA TAAGGG TTTCC CCCTTA TTTTTAAAGGATAAA rpmG 148332 - 148484 + | ribosomal protein L33 TERM 134 148490 - 148501 + F 74 -7.2 -4.08317 | overlap 148492 TAAACTTTAATTTTC GGGC TTTT GCCC TTTCATTTAGACTTG TERM 135 148492 - 148545 + F 100 -15.5 -2.54896 | gap 1, opp_overlap 148532, overlap 148490 AACTTTAATTTTCGG GCTTTTGCCCTTTCATTTAGACTTGC TAG GCAGGTCTAAATGAGCGGGCGTA-GC TCAGTTGGCTAGAGC TERM 136 148842 - 148852 + G 70 -4 -4.83759 | TAGTTGTAGTAACTG TAGT GAC ACTA TTTTTAAGTTTAGTT secE 148718 - 148906 + | preprotein translocase, SecE subunit nusG 148915 - 149439 + | transcription termination/antitermination factor NusG rplK 149450 - 149875 + | ribosomal protein L11 rplA 149917 - 150618 + | ribosomal protein L1 TERM 137 150790 - 150762 - g 91 -13.3 -3.26842 | overlap 150754 150766 AAAAGAATTTACCAA TGAAGTGTGCGTA TTT TACGCAGACTTCA AAGGTCAGACAGTAA TERM 138 150786 - 150766 - g 72 -8.3 -3.41581 | overlap 150762 150754 GAATTTACCAATGAA GTGTGCGTA TTT TACGCAGAC TTCAAAGGTCAGACA NAMH_0178 150706 - 151185 + | 50S ribosomal protein L10 TERM 139 151504 - 151481 - g 74 -6 -4.52669 | overlap 151483 AAGAAGCTAAAGAAA TCGTTGATGG TGCA CCTTCAACAA TCAAAGAAGCTGTAA rplL 151213 - 151587 + | ribosomal protein L7/L12 TERM 140 152508 - 152492 - g 86 -5.2 -5.61824 | opp_overlap 152492, overlap 152482 GAAAACTTAAAAAAA TTCAAG AAGAG CTTGAA TATGTCGAATATCCT TERM 141 153128 - 153116 - g 72 -2.7 -5.30575 | overlap 153117 CAAAAATGCAAAAAA CTATC AGA GATAA AATGACTACAGTTAC TERM 142 154179 - 154164 - g 71 -7.6 -3.52396 | opp_overlap 154164 154163 AAGAATTATTAAAGA CGATGT TTAT ACATCG GTTCATATTTATGAA rpoB 151663 - 155802 + | DNA-directed RNA polymerase, beta subunit TERM 143 156939 - 156915 - g 74 -2.1 -5.40072 | overlap 156917 GTCTTCCTAAAAAAA TGGCGCTTGAA CTA TTCAAACCGCA TCTAATCGGTAAACT TERM 144 157483 - 157462 - g 70 -3.7 -4.88222 | overlap 157463 157466 AGTAAAAGTTAAAAA CGAAGTTGT TGAT ACAACTCCT GGTAGAATGATTTTA TERM 145 159872 - 159842 - g 74 -5.4 -4.83169 | overlap 159845 ATCCTTGGAGAAAAA GCACTTCAGCAATA TAT TGTTGCGGAAGTTC AAAAAGTATACAGAC rpoC 155789 - 160291 + | DNA-directed RNA polymerase, beta' subunit rpsL 160413 - 160796 + | ribosomal protein S12 rpsG 161032 - 161499 + | ribosomal protein S7 TERM 146 162254 - 162244 - g 79 -4 -5.46276 | opp_overlap 162244, overlap 162252 AATACAGAGAAAAAA TGAT TGA ATCA GTTGTTGAAACTGAT TERM 147 162352 - 162342 - g 82 -5.4 -5.26875 | opp_overlap 162342, overlap 162346 TCTGCAATTAAAAAA GCAA CAA TTGC TATTGAAATTGTTCC fusA 161598 - 163679 + | translation elongation factor G TERM 148 163671 - 163686 + F 95 -4.7 -6.17033 | opp_overlap 163669 163671 ATTATTAAAGAAAGA CAAGG TTAATT CCTTG TTTTTTCTTTTTTTT modD 163895 - 164719 + | ModD protein NAMH_0185 165143 - 164706 - | hypothetical protein NAMH_0187 165600 - 165205 - | hypothetical protein NAMH_0188 165738 - 166040 + | hypothetical protein NAMH_0189 166066 - 166305 + | hypothetical protein TERM 149 166314 - 166291 - f 84 -5.4 -5.48063 | ATCGAATATAAAAAA GAAAAAGG TCTTTAAT CCTTTTTC TTAGCAATTTTTTTC NAMH_0191 166380 - 167603 + | hypothetical protein NAMH_0190 168126 - 167596 - | hypothetical protein TERM 150 167761 - 167772 + g 73 -4.4 -5.00136 | opp_overlap 167755 167761, overlap 167755 ATTATTTAACGATAA TTCG ATAT CGAA TTTTATATTTTCTTT NAMH_0192 168503 - 168102 - | putative lipoprotein TERM 151 169193 - 169179 - g 79 -3.6 -5.46698 | overlap 169181 CCTAAAATGAAAAAA TACAAA AAT TTTGCA GACGTTCCCAAATCT modA 168618 - 169334 + | molybdate ABC transporter, periplasmic molybdate-binding protein NAMH_0194 169344 - 169718 + | hypothetical protein TERM 152 169928 - 169939 + G 81 -5.8 -5.0133 | CTTTCTCAAAGTTCA CCTG TAGG CAGG TTTTTTGAAGAAATG modB 169715 - 170389 + | molybdate ABC transporter, permease protein TERM 153 170425 - 170411 - g 100 -6.4 -6.15717 | overlap 170413 TAAACATAAAAAAAA TGCTCC ACG GAAGCA GCGGAGAGATGGAGC NAMH_0196 170386 - 171240 + | ATPase TERM 154 171834 - 171847 + G 79 -5.3 -5.10064 | opp_overlap 171825 171834, overlap 171827 171825 CAAGAATATTACAAT CCTAT TGTG ATAGG TTTTTGTGTATTGCA NAMH_0197 171285 - 171944 + | hypothetical protein TERM 155 172473 - 172484 + G 71 -3 -5.03747 | opp_overlap 172452 172473 TTAAAACCAATACGA TTTC AATT GAAA TTTTTTCAGCAGTTT NAMH_0199 171941 - 172615 + | molybdenum ABC transporter, permease protein NAMH_0198 173335 - 172607 - | PhoH family protein nadC 174299 - 173481 - | nicotinate-nucleotide pyrophosphorylase nadA 175390 - 174419 - | quinolinate synthetase complex, A subunit TERM 156 174647 - 174671 + g 100 -10 -5.10933 | GAAATTAAATTCAGT CCCGATAGCC ATAGG GGTTGTCGGG TTTTCTTTTACATAA TERM 157 175506 - 175518 + G 73 -6.9 -3.94002 | AATAGCTTATCTTGT CGGGG GAA TCCCG TTTGGTTACCTGATA NAMH_0202 175468 - 176076 + | hypothetical protein folB 176079 - 176435 + | dihydroneopterin aldolase NAMH_0204 176514 - 177182 + | two-component regulator NAMH_0205 177184 - 177441 + | ferredoxin TERM 158 177481 - 177495 + G 81 -10 -3.34398 | opp_overlap 177483 177491, overlap 177480 177484 ATATAGGTTCGAACT CAGCCA GAA TGGCTG TATTTAAAAAAACCA TERM 159 177484 - 177520 + G 100 -9.5 -5.28983 | opp_overlap 177483 177491, overlap 177481 177480 177502 TAGGTTCGAACTCAG CCAGAATGGCTGTATTT AAA AAAACCAGCCGTTTTGG TTTTTATCTTTTACG NAMH_0206 177441 - 178907 + | guanosine pentaphosphate phosphohydrolase gppa NAMH_0207 178904 - 179377 + | putative lipoprotein NAMH_0208 179364 - 180491 + | FAD dependent oxidoreductase NAMH_0209 180478 - 181245 + | abc transport system ATP-binding protein NAMH_0211 181232 - 181930 + | high affinity branched-chain amino acid ABC transporter, ATP-binding protein NAMH_0210 182808 - 181927 - | exonuclease NAMH_0212 183451 - 182789 - | hypothetical protein TERM 160 183242 - 183268 + g 78 -10.4 -2.67588 | opp_overlap 183241 183242, overlap 183241 183240 183248 183260 TCCGATTGAAAAACC GTTAAATTCGAA ATC TTTGAATTTAAC CTGTTTGAATTCCGT NAMH_0213 184118 - 183444 - | putative transcriptional regulator, Fis family TERM 161 184633 - 184643 + r 79 -2.6 -5.86332 | opp_overlap 184633 184632 GAAACAGTTACGAAT TATT TGA AATA TTTTTTTTCAATTAA NAMH_0214 185520 - 184651 - | hypothetical protein amt 186844 - 185564 - | ammonium transporter TERM 162 185969 - 185957 - G 73 -6.9 -3.96188 | overlap 185958 AACTATACCTACAAA CCCGG CAG CCGGA GTAATAGCCACAAGA TERM 163 186774 - 186762 - G 74 -9.1 -3.10715 | GCCACCATCATCCAA GCGGT GTT ACCGC TGTCAAGTTTAGGTT NAMH_0216 187172 - 186834 - | nitrogen regulatory protein P-II NAMH_0217 187349 - 187678 + | hypothetical protein NAMH_0218 187865 - 188392 + | hypothetical protein NAMH_0219 188445 - 188738 + | hypothetical protein NAMH_0220 188749 - 189111 + | hypothetical protein TERM 164 189269 - 189281 + G 71 -3.4 -5.0538 | opp_overlap 189260 AGAGAATCTTTTAAG CCTT AAAAA AAGG TTTTTTCACCTGAGA TERM 165 189857 - 189845 - g 82 -4.1 -5.40072 | TCTTCTTGAAAAAAA CAGAC ATG ATCTG ATTAAAAAATGGGCG TERM 166 189908 - 189934 + G 73 -8.8 -3.28924 | opp_overlap 189904 GGATATAAAATCCCC TATTCAGGTGGG ACA TCCGCTTGAATA TTATGAAGACAAATA NAMH_0221 189120 - 190883 + | invasion antigen B TERM 167 190985 - 190967 - g 75 -4.7 -4.98616 | GGAAAATATTAAAAA TTTACAT GAAAA ATGTAAA AAACAAAATAAAGAT TERM 168 191114 - 191134 + G 82 -9 -4.03767 | opp_overlap 191113 191114 191112, overlap 191115 ATGGAATGAAAAAGC TCCTCGTC ATAAA GACGAGGG TTATTCTATTGTTAA TERM 169 191115 - 191133 + G 80 -10.3 -3.01176 | opp_overlap 191113 191114 191112, overlap 191114 TGGAATGAAAAAGCT CCTCGTC ATAAA GACGAGG GTTATTCTATTGTTA NAMH_0223 190911 - 191171 + | hypothetical protein NAMH_0222 191719 - 191168 - | hypothetical protein TERM 170 191436 - 191422 - G 75 -5 -4.87133 | ACGCCGCAAATAAAA TAGCAA CCG CTGCTA CTCCGCTACCAGGCC TERM 171 191673 - 191686 + g 82 -5.3 -5.38958 | opp_overlap 191673 ATAATCGACATAGTA CTGAA TTCT TTCAG TTTTTCTTTGTCGAT lys 193027 - 191810 - | saccharopine dehydrogenase TERM 172 191856 - 191869 + g 71 -6.7 -4.26351 | opp_overlap 191856 191855 AATTCTTCGATAAAC CAAGG CAGG CCTTG TTTATTAAGTTGGTA TERM 173 192355 - 192381 + g 73 -9.4 -2.79492 | overlap 192352 192354 192359 192362 ATAGTAAGTAGCTCG GGTACTCTCCGA CTT TCGGATAGTTCC ATTTGAACTTAACGC TERM 174 192897 - 192915 + g 88 -7.4 -4.84359 | TCTTTAATGTCTTTT GCAATTGC GTC GCATTTGC TTTTTGTACGACTAG lys 194226 - 193030 - | saccharopine dehydrogenase TERM 175 193240 - 193275 + g 80 -4.8 -5.2696 | overlap 193214 TTTTTCGTGGTTGCA GATGTTGTAGATATAG AATT TTTTATCTACACCGTC TTTTTTACCTTTTGC NAMH_0226 194327 - 195547 + | methyl-accepting chemotaxis sensory transducer NAMH_0227 195549 - 196436 + | putative N-carbamoylputrescine amidohydrolase NAMH_0228 196445 - 198289 + | diguanylate cyclase/phosphodiesterase domain 1 TERM 176 198485 - 198498 + G 74 -3.1 -5.30686 | overlap 198486 ATATACATTTTATGG TGGAA GATA TTCCG TTTTTTATAGATCTT TERM 177 198846 - 198825 - g 100 -9.5 -4.98255 | GGTGAATGATAAAAA CGCTCCTTT GCTT AAAGAAGCG GGGGCTGATATTTTA rpe 198286 - 198927 + | ribulose-phosphate 3-epimerase NAMH_0230 198938 - 199237 + | minor capsid protein TERM 178 199325 - 199309 - f 83 -4.5 -5.63857 | opp_overlap 199309, overlap 199317 199318 AAAAACGGAAAAAAA CTTCAAA ATG TTTAAAG TTTTTTAAACCGACC NAMH_0231 199341 - 199556 + | hypothetical protein trpF 199553 - 200155 + | N-(5'phosphoribosyl)anthranilate isomerase TERM 179 200902 - 200890 - g 77 -4.9 -5.15167 | GACGATGAAGAAAAA CTTTT ACA AAAAG CCGAACTTTATAAAA NAMH_0233 200254 - 201549 + | fibronectin/fibrinogen-binding protein NAMH_0234 201546 - 201785 + | hypothetical protein TERM 180 201805 - 201848 + F 90 -9.8 -4.19238 | opp_overlap 201805 CAGATAAGTTATTAA GTGGCTAAGTTGTGAAGA TATTGCCC TCTTTACACCTTAGCTAC TTTTCCACTTCAAAA TERM 181 202437 - 202451 + G 73 -3.6 -5.19261 | TGGGCTATATTTTAT GAATTT TTG GAATTC TTTTTTAATCGCTTT cdsA 201898 - 202635 + | phosphatidate cytidylyltransferase dxr 202636 - 203736 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase NAMH_0237 203717 - 204355 + | HAD-superfamily hydrolase subfamily IA NAMH_0238 205970 - 204516 - | K+ transporter Trk NAMH_0239 207235 - 205952 - | putative Trk system potassium uptake protein TrkA TERM 182 206665 - 206653 - G 76 -6.3 -4.46775 | opp_overlap 206653 CACCGAAAATATAAA GAAGA TCG TCTTC TTCTATAAAATCATC NAMH_0240 207416 - 207973 + | pyruvate synthase subunit PorC NAMH_0241 207983 - 208387 + | 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate NAMH_0242 208399 - 209616 + | pyruvate synthase subunit PorA TERM 183 209784 - 209801 + G 73 -7.1 -3.9534 | CTGCTACAGGGTGTC TTGAAGT GTGT ACTTCAA TTTATCCATATACAT NAMH_0243 209627 - 210580 + | PorB subunit of pyruvate:flavodoxin oxidoreductase TERM 184 211684 - 211699 + G 83 -6.2 -5.10163 | opp_overlap 211683 TATATTTTTAATGAT TGCAAA AATT TTTGCA TTTTCTTTTACGGTT NAMH_0245 210713 - 212434 + | voltage-gated chloride channel NAMH_0244 213363 - 212431 - | putative Mg2+/Co2+ transport protein TERM 185 212603 - 212619 + g 76 -6.5 -4.46669 | overlap 212599 ATAAGTGAGATTGCC GCAAGGC GCT GCATTGC TTTATTCATTTTGGT TERM 186 213379 - 213429 + H 79 -7 -4.63526 | opp_overlap 213370 213366 213394, overlap 213380 213382 AACTCACCTCCTATT GGAGGTTGCAGAGGAGATATAA TTTTTGC TTATATCGCCTCTACAACCTAA TTTCTTTGTAATTAT TERM 187 213380 - 213428 + H 83 -10.5 -3.36489 | opp_overlap 213370 213366 213394, overlap 213379 213382 ACTCACCTCCTATTG GAGGTTGCAGAGGAGATATAA TTTTTGC TTATATCGCCTCTACAACCTA ATTTCTTTGTAATTA TERM 188 213382 - 213426 + H 100 -13.1 -3.23101 | opp_overlap 213370 213366 213394, overlap 213380 213379 TCACCTCCTATTGGA GGTTGCAGAGGAGATATAA TTTTTGC TTATATCGCCTCTACAACC TAATTTCTTTGTAAT TERM 189 213892 - 213872 - g 72 -4.7 -4.68919 | opp_overlap 213872 AAAGATAAATCAAAA GCCAAAGAA ATT TTACTTGGC TTGTTAAAAAAACAT NAMH_0246 213404 - 213958 + | hypothetical protein TERM 190 214382 - 214367 - g 77 -6.2 -4.74453 | opp_overlap 214366 TAAGATAGTTAAAAA CTCTTT AAAA AAAGAG CTCCTCTCAAGGCTT TERM 191 215210 - 215183 - g 77 -8.6 -3.61764 | gap 1 TCAGGAAGTTGTAAA CGCATACGACAAT ACC ATTG-CGTATACG GATAAATTCTTAAGC NAMH_0247 213948 - 215552 + | sulfatase domain protein NAMH_0249 215549 - 215902 + | diacylglycerol kinase NAMH_0248 216972 - 215890 - | histidine kinase TERM 192 216321 - 216331 + g 73 -4 -5.09762 | opp_overlap 216321 TGTCTTCCAAATCTA TTTC TTC GAAA TTTTGTTTATTAAGG NAMH_0250 217708 - 217043 - | response regulator receiver domain protein TERM 193 218484 - 218462 - g 88 -7 -5.01732 | AATTTGGCTAAAAAA GGAAGTGATA TTG TACCTCTTCC CCTACCGCTTAGAAA NAMH_0251 217910 - 218893 + | glycoprotein endopeptidase TERM 194 219003 - 218969 - T 71 -2.3 -5.33866 | gap 1, opp_overlap 218972 218973 218977, overlap 218973 TAAAGTGATAAAAAA GA-AAGAAAGCAGA AATTATAA TCTGCTTTCGTATC TTCTAAGCATCCAAA TERM 195 218998 - 218973 - T 91 -7.7 -5.13354 | opp_overlap 218972 218973 218977, overlap 218969 GTGATAAAAAAGAAA GAAAGCAGA AATTATAA TCTGCTTTC GTATCTTCTAAGCAT rpsU 219196 - 218984 - | ribosomal protein S21 pyrG 219384 - 221021 + | CTP synthase recJ 221025 - 222587 + | single-stranded-DNA-specific exonuclease RecJ NAMH_0255 222584 - 223045 + | cyclic nucleotide-binding domain protein NAMH_0256 223105 - 223818 + | hypothetical protein TERM 196 224406 - 224389 - g 72 -2.7 -5.36689 | gap 1, overlap 224393 AAAGGAAAAATAAAA CTCACTCC ATT AGAG-GAG AAAGGGTATGTGTTG TERM 197 224704 - 224714 + G 83 -6.8 -5.01732 | opp_overlap 224704 AAAGAAGACGCAAAA GCCA TTG TGGC TTTTTTAAAAACATT TERM 198 224714 - 224704 - g 74 -6.8 -4.32951 | opp_overlap 224704 AAAGAAGACGCAAAA GCCA TTG TGGC TTTTTTAAAAACATT NAMH_0257 223849 - 224772 + | cytochrome c551 peroxidase TERM 199 226481 - 226467 - g 70 -7.2 -3.80841 | opp_overlap 226467 ACCAGTATTATTAAA CAAATG TAT CATTTG TATCTCAAGAATAAA TERM 200 226513 - 226497 - g 72 -5.9 -4.45738 | overlap 226498 TATCTCAAGAATAAA GCTCTTT CTA AAAGAAC GACATTCGAAATTTT NAMH_0258 224769 - 226886 + | diguanylate cyclase/phosphodiesterase NAMH_0259 227330 - 227004 - | hypothetical protein TERM 201 227029 - 227077 + g 93 -10.7 -4.02762 | gap 3, opp_overlap 227018 227026 227029, overlap 227019 227024 227068 ATATTGACGAAATGA TCGATTTCGCCTTT-G-A-CGATG ATAG CATCGATACAAAAGGCGGAATCGA TTCTATTTTGCTTAA TERM 202 227077 - 227029 - G 71 -8.5 -2.97934 | gap 3, opp_overlap 227019 227029 227024 227068, overlap 227018 227026 ATATTGACGAAATGA TCGATTTCGCCTTT-G-A-CGATG ATAG CATCGATACAAAAGGCGGAATCGA TTCTATTTTGCTTAA NAMH_0260 227682 - 227317 - | thioesterase family protein TERM 203 228357 - 228345 - g 86 -4.9 -5.61881 | opp_overlap 228345 TGTTAAAAATAAAAA GTTTT CCC AAAAC ATACTTTTTTCTCAT NAMH_0262 227725 - 228837 + | NAD(FAD)-utilizing dehydrogenase NAMH_0261 229373 - 228807 - | hypothetical protein NAMH_0263 229876 - 229370 - | hypothetical protein NAMH_0264 230738 - 229869 - | hypothetical protein TERM 204 230618 - 230639 + g 74 -3.1 -5.39407 | TTTTGTTGTCAAATT CTTTAATTT CGCT AAATAAAAG TTTGTTTTTTTTATA NAMH_0265 231538 - 230729 - | phage integrase NAMH_0266 231908 - 231510 - | hypothetical protein miaB 233230 - 231962 - | tRNA-I(6)A37 thiotransferase enzyme MiaB TERM 205 233012 - 233030 + g 82 -3.1 -5.61881 | overlap 232992 232987 233013 GGTGCAACCGCACAC GCCGAAT TTCGC ATTCGGG TTTTTCTTTTTAAGA TERM 206 233049 - 233077 + g 79 -5.4 -5.1244 | gap 1 TTCTTTTTAAGAGCA CCGAGTTCGGAAA AAAG TTTTTGAAC-CGG TTTTTCTCTTACTGA NAMH_0268 233469 - 233239 - | hypothetical protein TERM 207 233340 - 233352 + g 71 -6.3 -4.12475 | CAAGTTTGTCTATTA GATCT TTA AGATC TTTGTATGATGTGTC TERM 208 233705 - 233694 - g 72 -5.8 -4.34008 | overlap 233691 GATGAAGTAAAAGAA GCGT TTAA ACGC TCAATCATAAAAACC nusA 233622 - 234695 + | transcription termination factor NusA NAMH_0271 234704 - 235660 + | integral membrane protein murB 236427 - 235654 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 209 236198 - 236233 + g 78 -2 -5.76237 | gap 1, overlap 236199 AAATTATAAAATACT TGGTTGTTTGT-TTTAG CCC CTACGTACAAATAACCG TTTTTTATTTCTATA fliQ 236697 - 236431 - | flagellar biosynthetic protein FliQ NAMH_0273 237163 - 236687 - | hypothetical protein NAMH_0274 238073 - 237180 - | hypothetical protein NAMH_0275 238188 - 240551 + | ggdef family protein recA 240630 - 241682 + | protein RecA eno 241683 - 242948 + | phosphopyruvate hydratase NAMH_0278 242986 - 243234 + | hypothetical protein TERM 210 243512 - 243501 - g 71 -3 -5.06451 | CATGAGCCTAAAAAA TTTC CGAT GAAA GAATTGAATTTTTTA NAMH_0279 243231 - 243806 + | hypothetical protein TERM 211 244006 - 243985 - g 89 -3.1 -5.91981 | AAAATGGAAAAAAAA TGTTTTGAA TGGA TTAAAAACA GCGTTACTAATACGA TERM 212 244175 - 244148 - g 91 -2.8 -6.08563 | gap 1, overlap 244150 AAGAGATAAAAAAAA GACCTCTTTTTCA GGA TGTAAAAAAGG-C AAAAGAGCTTTTTAA TERM 213 244174 - 244150 - g 80 -6.5 -4.65669 | overlap 244148 GAGATAAAAAAAAGA CCTCTTTTTCA GGA TGTAAAAAAGG CAAAAGAGCTTTTTA aroK 243793 - 244296 + | shikimate kinase NAMH_0281 244280 - 244465 + | hypothetical protein NAMH_0282 244632 - 245219 + | DNA polymerase, bacteriophage-type NAMH_0283 245280 - 245570 + | hypothetical protein NAMH_0284 246086 - 245571 - | phosphoribosylglycinamide formyltransferase TERM 214 245975 - 245959 - G 79 -9.5 -3.33815 | opp_overlap 245958 245957 245955 245962, overlap 245962 ATCGGTGGCAATGAA GAAGCAT TTA ATGCTTC ACTATTTTGAATATT NAMH_0285 246201 - 248264 + | hypothetical protein TERM 215 248256 - 248281 + T 100 -13.5 -4.84918 | TCATTTACACCGGTA TTCAGATAAGG GTTT CCTTATCTGAA TTTTATATTTATAAA NAMH_0287 248888 - 248535 - | hypothetical protein NAMH_0288 248997 - 248872 - | transformation system protein murD 250172 - 248994 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase NAMH_0290 251071 - 250169 - | PfaP TERM 216 250697 - 250708 + g 77 -3 -5.52347 | AGCCATACTTTCGAC GTAA ACAT TTAC TTTTTTGCTTTTATT mraY 252135 - 251080 - | phospho-N-acetylmuramoyl-pentapeptide-transferase fabG 252203 - 252946 + | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 217 253166 - 253155 - g 76 -4.4 -5.06414 | GCTCTTGAAGAAAAA TTCG AAAT CGAA ATTCCTGACAGCGAA acpP 253008 - 253241 + | acyl carrier protein TERM 218 253538 - 253520 - g 84 -3.9 -5.73672 | gap 1, overlap 253521 253522 AAAGAAGTAAAAAAA GC-GGATA GATT TATCCAGC TCGGTATGAAAGCCG NAMH_0294 253319 - 254539 + | beta-ketoacyl synthase accA 254549 - 255484 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 219 255472 - 255495 + T 91 -7.6 -5.18357 | AAACTACGGAAGTTT TAACGAAAAA TAAT TTTTTCGTTG TTTTTTACTGCATTA TERM 220 255699 - 255673 - T 71 -6.6 -4.08767 | opp_overlap 255672, overlap 255674 CGGACTTTTGTAAAA GGCAAAAAAGCC TGT GGCTTTTTTGGG AGGTTTTACTTGGCG TERM 221 255698 - 255674 - T 81 -10.1 -3.05046 | opp_overlap 255672, overlap 255673 GGACTTTTGTAAAAG GCAAAAAAGCC TGT GGCTTTTTTGG GAGGTTTTACTTGGC uvrA 258515 - 255705 - | excinuclease ABC, A subunit TERM 222 255927 - 255914 - G 72 -8.1 -3.39327 | TTCCGAGATCCACAA GGTGC TGAA GCACC TGAACGAGCCTGTCT TERM 223 258269 - 258289 + g 74 -6.8 -4.42788 | opp_overlap 258271 TCTGATCAATCGCAA TAGCCGGG GTAAG CCCGTCTA TTTTATCCACTTCAG NAMH_0297 259050 - 258595 - | hypothetical protein NAMH_0298 259790 - 259050 - | protein of unknown function DUF81 NAMH_0299 259851 - 260252 + | hypothetical protein NAMH_0300 260252 - 260563 + | surface presentation of antigens (spoa) protein TERM 224 260582 - 260566 - f 91 -8.1 -4.95487 | AAAAGAAACATAAAA TTGCTTA AAG TAAGCAA AATAGCTAAGGAGCG NAMH_0301 260601 - 261362 + | hypothetical protein gidA 261349 - 263220 + | glucose-inhibited division protein A TERM 225 263416 - 263403 - g 79 -4.5 -5.31456 | overlap 263404 GGAAGTTAGAAAAAA CGGCT ATAA AGCCA TGAATGTGGATGCCC NAMH_0303 263263 - 263541 + | hypothetical protein NAMH_0305 263553 - 263696 + | hypothetical protein NAMH_0304 264429 - 263668 - | sensory trasnduction histidine kinase TERM 226 264148 - 264166 + g 84 -3.8 -5.61824 | opp_overlap 264133 GAGCCTGTCTATAAG CTCACTGA GTC TTAGGGAG TTTTTTTGGATTTTA TERM 227 264301 - 264317 + g 70 -2.3 -5.27769 | overlap 264303 GGATATGAGTTCGTC TTTTGAA GAG TTCAGGA TTTTTAGTTTTTTGT TERM 228 264418 - 264400 - G 77 -3.2 -5.40072 | opp_overlap 264402 264403, overlap 264402 264403 TTCTTCCGAAAAAAA GATTTTTT TTA AAAAATTC TCAATTCTCAATTCT phoB 265109 - 264471 - | DNA-binding response regulator PhoB NAMH_0307 265732 - 265172 - | putative phosphate transport system protein PhoU pstS 265858 - 266856 + | phosphate ABC transporter, phosphate-binding protein PstS TERM 229 266871 - 266859 - f 74 -4.1 -5.14626 | opp_overlap 266865, overlap 266854 ATCACCAAAATAAAA GGTCT TTA AAACC TTTTTTATTTTTAAT pstC 266912 - 267991 + | phosphate ABC transporter, permease protein PstC pstA 267988 - 268794 + | phosphate ABC transporter, permease protein PstA TERM 230 269467 - 269448 - g 74 -5.8 -4.46775 | CAGCTAAAAGATAAA GTTACAAT AGCA ATCGTAAC CCACAACATGCAGCA pstB 268815 - 269615 + | phosphate ABC transporter, ATP-binding protein TERM 231 270198 - 270209 + G 70 -7.2 -3.86202 | ATGGGTGCGGGTATT GCCG CTGC CGGC TTTAGTATAGTGCAC TERM 232 270493 - 270483 - g 74 -3.2 -5.21709 | CCTCATACTAAAAAA CCAA CAT TCGG TGTAGCTGCAATATT TERM 233 271186 - 271174 - g 76 -2.7 -5.54264 | AAAGATTCAAAAAAA TCCTT AAA AAAGA AGAAAAGGTAAAATA NAMH_0312 269694 - 271313 + | phosphate transporter TERM 234 271339 - 271325 - f 73 -4.4 -4.93547 | opp_overlap 271338 GTAATTAATGAAAAA TTTAAA ATG TTTAAA GGAAAATGAGATTTC TERM 235 271338 - 271363 + F 80 -7.7 -4.21644 | opp_overlap 271325 271340, overlap 271340 AATTTAAAATGTTTA AAGGAAAATGA GATT TCATTTTCCTA TTTCATTTAATTTTT TERM 236 271361 - 271340 - f 87 -10.3 -3.66666 | opp_overlap 271338 271340 TTTAAAATGTTTAAA GGAAAATGA GATT TCATTTTCC TATTTCATTTAATTT TERM 237 271340 - 271361 + F 87 -10.3 -3.67051 | opp_overlap 271340, overlap 271338 TTTAAAATGTTTAAA GGAAAATGA GATT TCATTTTCC TATTTCATTTAATTT TERM 238 272251 - 272267 + G 72 -5.1 -4.81212 | opp_overlap 272250, overlap 272252 GATGATGAAATAATT GCAGGTT TAA AACCTGA TTTTATTGTAGTGGC TERM 239 272252 - 272266 + G 75 -8.6 -3.48004 | opp_overlap 272250, overlap 272251 ATGATGAAATAATTG CAGGTT TAA AACCTG ATTTTATTGTAGTGG fmt 272041 - 272925 + | methionyl-tRNA formyltransferase TERM 240 273100 - 273125 + G 71 -5.5 -4.48987 | AATAATAAATGGGTA GGGAAAAAGGG TAAT CTTTTTTTCTC TTTTACTTATGAAAA NAMH_0314 272941 - 273573 + | biotin-[acetyl-CoA-carboxylase] ligase TERM 241 274006 - 274022 + G 76 -3.7 -5.27779 | opp_overlap 274006 GTGACAGTGTAATTA TTCCG ATACAGA CGGAA TTTTTTGCTCTTGAA TERM 242 274233 - 274210 - g 91 -2.4 -6.20267 | overlap 274211 TCAAAAACAAAAAAA GCGGAAAATA TATT TATATTCCGA GAAATGTAAGACTTG TERM 243 274232 - 274211 - g 72 -5.9 -4.285 | overlap 274210 CAAAAACAAAAAAAG CGGAAAATA TATT TATATTCCG AGAAATGTAAGACTT NAMH_0315 273570 - 274358 + | cobyrinic Acid a,c-diamide synthase TERM 244 275028 - 275017 - g 84 -5.8 -5.32699 | overlap 275007 TCAAAGATTAAAAAA TCCG AAAC CGGA AGCGGAAGATATTCC NAMH_0316 274355 - 275188 + | stage 0 sporulation protein j NAMH_0317 275222 - 275647 + | putative H+-transporting two-sector ATPase, B/B' subunit NAMH_0318 275644 - 276147 + | ATP synthase B chain NAMH_0319 276147 - 276662 + | putative ATP synthase F1, delta subunit atpA 276678 - 278177 + | ATP synthase F1, alpha subunit TERM 245 278505 - 278491 - g 80 -7.2 -4.54253 | AAACTATTAAACAAA CAATCA AAC TGATTG AAGAACTAAAAGAAA atpG 278181 - 279059 + | ATP synthase F1, gamma subunit TERM 246 279289 - 279279 - g 77 -5.4 -4.9934 | opp_overlap 279270 ACAAGAGGAGAAAAA GTAG TAG CTAC TGGTGCTCCTATTAA TERM 247 279959 - 279945 - g 72 -2.8 -5.27477 | overlap 279946 ACTTCAACTAAAAAA GGAAGT ATT ACTTCA ATCCAGGCTGTTTAC atpD 279069 - 280475 + | ATP synthase F1, beta subunit atpC 280485 - 280865 + | ATP synthase F1, epsilon subunit NAMH_0324 280846 - 281394 + | exbb\tolq family transport protein NAMH_0325 281391 - 281768 + | ExbD\tolR family transport protein NAMH_0326 281810 - 282451 + | hypothetical protein TERM 248 282541 - 282531 - g 77 -5.4 -4.87291 | opp_overlap 282529 282531, overlap 282533 282540 TATTTTAATGAAAAA CCTA AAA TAGG TGTATTTTATACCGG NAMH_0327 282444 - 283604 + | protein TolB NAMH_0328 283620 - 284207 + | lipoprotein TERM 249 284237 - 284216 - f 80 -10.3 -2.62311 | opp_overlap 284219, overlap 284213 284212 284219 ACCATAATTAAGGTA CAATTCCTT TAAA AAGGAATTG TATGAAAAAACTTTT NAMH_0329 284239 - 285132 + | TPR repeat protein NAMH_0330 285170 - 285655 + | fkbp-type peptidyl-prolyl cis-trans isomerase slyd TERM 250 285705 - 285721 + F 78 -2.3 -5.86976 | overlap 285698 GTCTGTCACTTTTAG TAAGAGA TCT TTTCTTG TTTTTTATTTTCTCG fabD 285843 - 286754 + | malonyl CoA-acyl carrier protein transacylase NAMH_0332 286783 - 287523 + | nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 251 287824 - 287813 - g 72 -5.8 -4.30809 | opp_overlap 287813 287812 287817 TAATAGCCACTAAAA CGTG TCAG CACG ATGTTGATTTGACGG mtnN 287533 - 288222 + | MTA/SAH nucleosidase TERM 252 288930 - 288919 - g 84 -5.8 -5.30348 | ATTCAACAACAAAAA CCGT TTTA ACGG ATGTGGCAAAAGTAA NAMH_0334 288234 - 289427 + | hypothetical protein NAMH_0335 289424 - 290203 + | PP-loop family protein TERM 253 290712 - 290701 - g 74 -2.2 -5.40004 | GATGAAATCAAAAAA CTCG CTTC CGAA ATAGGGCTTGACGAA trmU 290203 - 291228 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 254 291955 - 291945 - g 82 -5.4 -5.25799 | AAAAGAAGAGAAAAA GCAA ATG TTGC GGAAGTTATGAATAT NAMH_0337 291360 - 292286 + | ribose-phosphate pyrophosphokinase NAMH_0338 292286 - 292840 + | thymidylate synthase NAMH_0339 292837 - 293469 + | ribonuclease T2 family NAMH_0340 294777 - 293476 - | amino acid transporter TERM 255 293807 - 293796 - G 77 -3 -5.47846 | opp_overlap 293796 293800, overlap 293800 AATTAAAAAATAAAA TCAT GGGA ATGA TTATTAAGGCACTTA TERM 256 294121 - 294137 + g 74 -2.2 -5.51165 | opp_overlap 294121 294124 AGATATTGCCAAGAA CATTGC CTTAA GCATTG TTTTTTTAGGATTTT NAMH_0341 295304 - 294813 - | phosphatidylglycerophosphatase A NAMH_0342 296551 - 295376 - | sulfate adenylyltransferase TERM 257 296521 - 296531 + g 72 -2.6 -5.27938 | overlap 296521 AAGCTTCTTTGTCTA TAAA AAT TTTA TTTTTGTTTAAAGAT NAMH_0343 297392 - 296529 - | response regulator receiver domain protein TERM 258 296848 - 296868 + g 70 -4.1 -4.6645 | ATTGTATTTTTATTT TTTAGATCT TTA GGATTTAAA TTTTGTATGTCTATG TERM 259 297300 - 297282 - G 80 -10.4 -3.09635 | opp_overlap 297298, overlap 297298 ACCGTCAGTATTCAA TGCTTCAT CAT ATGAAGCA AAAATTTCGCATTTT TERM 260 297308 - 297318 + g 74 -6.8 -4.33653 | opp_overlap 297298 297307, overlap 297298 ATGAAGCAAAAATTT CGCA TTT TGCG TTTAATTTTTCGCTC NAMH_0344 298482 - 297373 - | IspD/IspF bifunctional enzyme TERM 261 299174 - 299199 + G 72 -9.3 -2.52519 | opp_overlap 299176, overlap 299173 299170 299176 AAAACAAAATCCAGA CATTATTATAT GGCC ATATAATAATG CTATTGATATGCTAC NAMH_0345 298560 - 299798 + | putative lipoprotein TERM 262 300226 - 300210 - g 72 -5.1 -4.65895 | overlap 300213 CGCCGGAGCTAAAAA CATGGAT GAA ATCCGTG AAGCCATTATTGCTG thiC 299860 - 301245 + | thiamine biosynthesis protein ThiC NAMH_0347 301307 - 302422 + | ATP/GTP-binding protein TERM 263 302415 - 302441 + T 74 -3.9 -5.24129 | gap 1, opp_overlap 302420, overlap 302415 302416 302420 CGAGCGCATGCAGTA TG-AAATAAGGG TTTT TCCTTATTTCCA TTTTTTATAAAAAGA TERM 264 302416 - 302439 + T 73 -9 -2.83915 | opp_overlap 302420, overlap 302415 302415 302420 GAGCGCATGCAGTAT GAAATAAGGG TTTT TCCTTATTTC CATTTTTTATAAAAA NAMH_0348 303310 - 302789 - | putative annexin TERM 265 303317 - 303346 + r 71 -8.1 -3.23395 | gap 1, opp_overlap 303317 303316 TTTATTCATAAAAGT CCCCTTTTTT-TTA TTA TAGCAAAAAAGGGG TTACTCGTAGTGAGT NAMH_0349 304198 - 303347 - | hypothetical protein TERM 266 304535 - 304521 - g 73 -8.6 -3.3353 | CCCTGTATAAAGAGA CTCTTC CAA GAAGAG GGGAAATTAAAGTCG TERM 267 304849 - 304835 - g 84 -5.8 -5.36965 | opp_overlap 304835, overlap 304836 GAAGAGGACAAAAAA TCTTTT CCT AAAAGA TTTCAGGAAATGGTA NAMH_0351 304322 - 304915 + | hypothetical protein NAMH_0350 305771 - 304902 - | methyltransferase TERM 268 305144 - 305178 + g 80 -6.4 -4.81249 | CTTTTTGGTGTGTGG GCGGGTCTATTATGAT TAT GTCGTAAGGGGCCTGC TTTTTAAGTTTCGGA TERM 269 305597 - 305609 + g 80 -6.3 -4.81685 | opp_overlap 305597, overlap 305574 TATATTCTTTGAATA GATCT AAA AGATC TTTTTCATAATTGCT NAMH_0352 306334 - 305771 - | hypothetical protein TERM 270 306895 - 306870 - g 95 -6.3 -5.80951 | ATCGAAAACAAAAAA TCAAAAAGC ATAGTCGA GCTTTTTGA GATGCTTTATGAGAA TERM 271 307915 - 307895 - g 72 -2.5 -5.37593 | opp_overlap 307896 307898, overlap 307896 307898 GGCGAAAGTAAAAAA CCAGCCTTT TGC AAAGGCTCT TATCGATATTTTAAA TERM 272 307898 - 307912 + G 73 -8.6 -3.29854 | opp_overlap 307898 307896 307895, overlap 307896 GAAAGTAAAAAACCA GCCTTT TGC AAAGGC TCTTATCGATATTTT TERM 273 307912 - 307898 - g 75 -8.6 -3.47392 | opp_overlap 307896 307898, overlap 307896 307895 GAAAGTAAAAAACCA GCCTTT TGC AAAGGC TCTTATCGATATTTT TERM 274 308581 - 308566 - g 95 -3.3 -6.32017 | overlap 308577 AAGAAACAAAAAAAA GCAAA GAAAAA TTTGC GCTAAAGCTCAAACA TERM 275 308594 - 308577 - g 82 -4.1 -5.43974 | overlap 308566 AAAAGCAAAGAAAAA TTTGCGC TAAA GCTCAAA CATCACGGACTGCAG NAMH_0353 306393 - 309029 + | helicase NAMH_0354 309031 - 309189 + | hypothetical protein TERM 276 309440 - 309450 + G 74 -6.8 -4.3467 | opp_overlap 309440, overlap 309427 AAGGTGCTTTTAATA GACG CGC CGTC TTTTAATCTGAGGCT lpxB 309182 - 310216 + | lipid-A-disaccharide synthase TERM 277 311737 - 311727 - g 74 -5.4 -4.8143 | opp_overlap 311727 GCAAGAAGTCAAAAA CGTT CTT AACG TTATTAGGGATATAG NAMH_0356 310279 - 312234 + | methyl-accepting chemotaxis sensory transducer TERM 278 312312 - 312285 - f 72 -3.6 -5.22794 | ATAATTACTAAAAAA TATACATTATAA AGGA TAATAATGCATA AGGAACCAATGACTA TERM 279 312566 - 312576 + G 76 -6.8 -4.49556 | TAACCGTGTAGCATT CGGT AGT ACCG TTTATTTAATCGACG NAMH_0357 312306 - 312794 + | transcription elongation factor grea transcript cleavage factorgrea NAMH_0358 312836 - 313264 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 280 313496 - 313509 + G 74 -2.4 -5.43866 | TGTTGAAAAAATAGC CAAG TACGAT CTTG TTTTTTTAGCGGTTC argC 313302 - 314279 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 281 314820 - 314810 - g 91 -2.6 -5.98675 | TACAAAAATAAAAAA TTTT GAA AAAA AAATTAAAGAAAAAA NAMH_0360 314295 - 315011 + | metallophosphoesterase NAMH_0361 315001 - 315951 + | chemotaxis protein ec 2.7.3 TERM 282 316439 - 316426 - g 79 -3.8 -5.42131 | opp_overlap 316426 GAAGGAGAGAAAAAA CCGA AAATAG TCGG TAATATTAACCTTGA TERM 283 317421 - 317410 - g 70 -4.4 -4.69027 | AAAGCCATCGAAAAA GGTA TCAT TACC GAAAGCGAAGCGGCT NAMH_0362 315970 - 318474 + | chemotaxis protein CheA NAMH_0364 318484 - 319002 + | purine-binding chemotaxis protein chew speA 320825 - 318999 - | arginine decarboxylase hisS 322011 - 320851 - | histidyl-tRNA synthetase TERM 284 320973 - 320989 + g 79 -3.7 -5.52096 | overlap 320965 320962 ATTTTACTTTCGGTT CGAAATA TAC TTTTTCG TTTTTTCTTAAATTT NAMH_0366 322857 - 322039 - | hypothetical protein NAMH_0367 322883 - 323671 + | metallophosphoesterase NAMH_0368 323661 - 324284 + | endonuclease III NAMH_0369 324286 - 324849 + | zinc metalloprotease TERM 285 325236 - 325221 - g 74 -3.4 -5.32699 | overlap 325211 TCAAATATCAAAAAA TTATAT TCTG ATATAA GTGTGGAACTTCAGG NAMH_0370 324858 - 326459 + | DNA recombination protein RmuC family protein TERM 286 326488 - 326457 - f 100 -9.7 -4.96848 | gap 1, opp_overlap 326462 326462, overlap 326462 GCTGTGATAGAAAAA TAAAAG-CTTCGCT TATTT AGCGAAGGCTTTTA GGAAGTTGATTACCA TERM 287 326482 - 326462 - f 84 -5.4 -5.38839 | opp_overlap 326462 326462, overlap 326457 GATAGAAAAATAAAA GCTTCGCT TATTT AGCGAAGG CTTTTAGGAAGTTGA TERM 288 327203 - 327188 - g 71 -3.4 -5.05037 | CAATACAAAAATAAA TTTTAT AAAT ATAAAA AATCTCTTTTATCCT NAMH_0371 326721 - 327935 + | hypothetical protein NAMH_0372 330554 - 327936 - | DNA polymerase I TERM 289 329207 - 329217 + g 91 -5.4 -5.95286 | overlap 329212 CTTCCTGGATGTCGA CTTC CGA GAAG TTTTTTCTTTTTCCT TERM 290 329691 - 329705 + g 80 -2.8 -5.60864 | overlap 329685 CGGCATTTTGGTTTT GACG TAAAGAC CGTC TTTTTTTACTCTCTC TERM 291 329865 - 329882 + g 80 -2.7 -5.75342 | overlap 329866 GCTTAAAAATGCGTT TTCTTTG TCTG CAAGGAG TTTTTTTTGAAGGGC NAMH_0374 330605 - 332746 + | hypothetical protein NAMH_0373 333283 - 332741 - | molybdopterin-guanine dinucleotide biosynthesis protein A moaC 333760 - 333293 - | molybdenum cofactor biosynthesis protein C NAMH_0376 334134 - 333991 - | hypothetical protein NAMH_0377 334474 - 334121 - | thiamine biosynthesis protein ThiI NAMH_0378 335204 - 334467 - | conserved hypothetical membrane protein, DUF81 family TERM 292 334909 - 334893 - G 78 -2.2 -5.63236 | opp_overlap 334895, overlap 334895 334896 ACTGAAAAATAAAAA TATGGC AAAAA GCCATT TTACCTCATGAACGG NAMH_0379 335578 - 335225 - | hypothetical protein NAMH_0380 338710 - 335639 - | RND transporter, Hydrophobe/Amphiphile Efflux-1 (HAE1) and Heavy Metal Efflux (HME) families, permease protein TERM 293 338771 - 338783 + r 72 -4.7 -4.77165 | overlap 338772 AATTTTCCACTTTTA TCGGG TAT CCCGC TTTTATTCTAAGAAG TERM 294 338772 - 338782 + r 73 -8.2 -3.45817 | overlap 338771 ATTTTCCACTTTTAT CGGG TAT CCCG CTTTTATTCTAAGAA NAMH_0381 339833 - 338754 - | efflux transporter, RND family, MFP subunit NAMH_0382 341095 - 339830 - | hypothetical protein TERM 295 340099 - 340116 + g 72 -2.7 -5.22039 | overlap 340101 TATAATTAATTTGTG CAGTTAA ATCT TTAACGG TTTTTTGAATTTCCA TERM 296 340141 - 340152 + g 71 -3 -5.18355 | TTTCCAGAGATGTTT TAGA TTCT TCTA TTTTTGCTTTTTGAA TERM 297 340377 - 340389 + g 88 -7.7 -5.08169 | TGTAAGGGTTTAATT GCGAA AAA TTCGC TTTTTTCCACTCTGT TERM 298 340838 - 340824 - G 71 -5.6 -4.57837 | opp_overlap 340824, overlap 340825 ATATTTTGTGAAAAA GGGAGG CTT CCTCCG CTCATTATAATTTTA TERM 299 340837 - 340825 - G 79 -9.1 -3.3422 | opp_overlap 340824, overlap 340824 TATTTTGTGAAAAAG GGAGG CTT CCTCC GCTCATTATAATTTT NAMH_0383 341652 - 341092 - | transcriptional regulator, TetR Family Member TERM 300 341569 - 341587 + g 100 -10.4 -4.27617 | TCCAATTTTATTTGC CACTTCTT CTA AAGAAGTG TTTTCATAACCTCTG NAMH_0385 341730 - 342317 + | hypothetical protein NAMH_0384 343117 - 342314 - | hypothetical protein TERM 301 342559 - 342573 + g 77 -5 -5.16472 | overlap 342552 CTATTACTTCCTGTG CGAAAG GAT CTTTTG TTTTTTGGAGTTTTT moaA 343211 - 344167 + | molybdenum cofactor biosynthesis protein A NAMH_0387 344265 - 345059 + | transcriptional regulator, Sir2 family TERM 302 345445 - 345430 - g 75 -4.8 -5.00616 | TTCCTGCGCAAAAAA TGATAA TTTA TTATCA ATGTAAATGAAAATA NAMH_0388 345069 - 345455 + | hypothetical protein NAMH_0389 345452 - 345808 + | cDNA sequence TERM 303 345909 - 345891 - g 78 -10.4 -2.7555 | TATAGTTGAAGACGA CGTTTCAT TAA ATGAAACG GTTAAAGAATTTTTG NAMH_0390 345859 - 346518 + | DNA-binding response regulator TERM 304 346922 - 346911 - g 77 -3 -5.5604 | TTAATGAAGAAAAAA TAAG TGAA CTTA AAAAACAACTTATAA NAMH_0392 346508 - 347635 + | histidine kinase NAMH_0391 347930 - 347628 - | transcriptional regulator, ArsR family NAMH_0393 348943 - 347933 - | C4-Dicarboxylate transporter TERM 305 348128 - 348138 + g 74 -6.8 -4.4296 | TGACATGGTGTAATT GAGC TCG GCTC TTTTAATATATCTTA TERM 306 348236 - 348225 - G 76 -4.4 -5.12474 | overlap 348219 GAGAATATATAAAAA GGTT CTTT AACC GAAATAAAAGACGTT TERM 307 348724 - 348742 + g 70 -4.6 -4.7373 | AAGAAATAATCGGAT GAAAAAGA TCG TCTTTTGC TTTTTCATAAAATAA TERM 308 348864 - 348852 - G 80 -4.9 -5.34632 | opp_overlap 348852 AACAAAACAGAAAAA TATTC ACT GAATA GTTTGCAGCTGATTG NAMH_0394 349079 - 350008 + | hypothetical protein TERM 309 350573 - 350561 - g 72 -2.7 -5.25735 | TTAAAAAATTAAAAA GTAAA AAT TTCAC ATTCAGCGTAAATGA TERM 310 350693 - 350663 - g 78 -6.9 -4.31329 | gap 2 TCAAAAACGCCAAAA CCGTAACCGCAATGC CCG GCA--GCGGATACGG TAAAATGACACTCGA NAMH_0395 350098 - 350862 + | hypothetical protein NAMH_0396 350920 - 351525 + | hypothetical protein amt 352706 - 351534 - | ammonium transporter NAMH_0398 353085 - 352747 - | nitrogen regulatory protein P-II TERM 311 353337 - 353327 - g 84 -4 -5.62045 | ACATATAATAAAAAA CTTT CTA AAAG TCAGATTAGTGAAAT NAMH_0400 353180 - 353452 + | hypothetical protein purT 354600 - 353431 - | phosphoribosylglycinamide formyltransferase 2 NAMH_0401 354705 - 354923 + | hypothetical protein feoB 354966 - 357026 + | ferrous iron transport protein B TERM 312 357400 - 357410 + G 76 -4.6 -5.06585 | ACTGGAATTATGTTG CGGC AAG GCTG TTTTTGTATGATTTG TERM 313 357647 - 357660 + G 90 -8.1 -4.91459 | opp_overlap 357633, overlap 357646 CGGCGAGCCTATTGA GCTGC CTCA GCAGC TTTTTATGGGTGTTG TERM 314 358476 - 358466 - g 70 -4.6 -4.70353 | CAGAAGAAACCAAAA CGAC CAT GCCG GAATTATCAGAAGCT TERM 315 358662 - 358645 - g 85 -4.1 -5.63857 | overlap 358648 358649 AAAAAGCGAAAAAAA TCACGTC AATC GACGCAA TCAACGGCAAACAGG NAMH_0403 357159 - 359597 + | ribonucleoside-diphosphate reductase, alpha subunit TERM 316 360652 - 360642 - g 79 -5.4 -5.0917 | TGAGCAAAAAACAAA CTTC TTC GAAG GTAATGTGGTTAACT NAMH_0404 359662 - 360702 + | ribonucleoside-diphosphate reductase, beta subunit TERM 317 360725 - 360739 + G 83 -7.8 -4.81083 | opp_overlap 360714 360710 360725, overlap 360718 GAGATTACTGTAAAA GCTCCT AAA AGGGGC TTTTTCGTAATTACG NAMH_0406 360692 - 361108 + | hypothetical protein NAMH_0405 361722 - 361102 - | hypothetical protein TERM 318 361234 - 361245 + g 77 -3 -5.43487 | overlap 361239 GTAGATATTGATATT TGTT GCAA AACA TTTTTTGTCTAATTT NAMH_0407 361774 - 362331 + | hypothetical protein NAMH_0408 362359 - 362928 + | fumarylacetoacetate hydrolase domain containing protein 1 NAMH_0409 362943 - 363644 + | radical SAM domain protein NAMH_0410 364182 - 364766 + | putative 6-pyruvoyl tetrahydrobiopterin synthase NAMH_0411 364810 - 365556 + | hypothetical protein TERM 319 365640 - 365625 - g 71 -7.6 -3.54771 | TTTAGAAGACGATAA CGGTAA GTTT TTACCG AGAAACGCAATACTT TERM 320 365656 - 365675 + G 74 -6.4 -4.37495 | overlap 365659 365667 AGAAACGCAATACTT GAAGCACT TGAG AGTGCTGC TCTTTTTTATTACAT TERM 321 365667 - 365677 + G 77 -3.2 -5.5074 | overlap 365659 365656 ACTTGAAGCACTTGA GAGT GCT GCTC TTTTTTATTACATTA TERM 322 365796 - 365782 - g 74 -5.8 -4.49088 | opp_overlap 365781 GAAATTAAAAAAATA GTATTT AAA AAATAC CCTGTTTTAGAGGGA NAMH_0412 365566 - 366279 + | hypothetical protein TERM 323 366433 - 366414 - g 73 -7.9 -3.82321 | overlap 366412 GATTTAACGAAAACA CTCATGC GGGAGA GCATGAG CATGAACACGGGCAT NAMH_0413 366281 - 366667 + | putative dinitrogenase iron-molybdenum cofactor NAMH_0415 366664 - 367029 + | putative dinitrogenase iron-molybdenum cofactor NAMH_0414 367399 - 366998 - | arsenate reductase NAMH_0417 367725 - 368339 + | hypothetical protein NAMH_0418 368402 - 369523 + | thrombospondin type 3 repeat:OmpA/MotB TERM 324 369859 - 369869 + G 72 -2.6 -5.36441 | GGTGTTTTTTTTACA TTAT TTA ATAA TTTTTTATCTAAGAA NAMH_0419 369598 - 370494 + | hypothetical protein rplT 371171 - 370821 - | ribosomal protein L20 rpmI 371458 - 371264 - | ribosomal protein L35 TERM 325 371817 - 371807 - g 70 -4 -4.88067 | AGTTATCTATAAAAA CAAA TAT TTTG GATGCATATTATTTT NAMH_0423 371551 - 372363 + | CBS domain pair protein NAMH_0422 373311 - 372346 - | 3-oxoacyl-[acyl-carrier-protein] synthase III TERM 326 373483 - 373432 - R 74 -8.8 -3.34404 | gap 1, opp_overlap 373435 373439, overlap 373430 373435 373452 TGACTAATTATAACA CATCCGTTTACTCCGAGTAACGGAG CAC CTCCG-TACTCAGCATAATCAGTTG CTTTTTTAAGACCTT TERM 327 373480 - 373435 - R 71 -9.1 -2.5333 | gap 1, opp_overlap 373435 373439, overlap 373432 373430 373452 CTAATTATAACACAT CCGTTTACTCCGAGTAACGGAG CAC CTCCG-TACTCAGCATAATCAG TTGCTTTTTTAAGAC TERM 328 373464 - 373452 - R 74 -9.1 -3.15544 | opp_overlap 373439 373435, overlap 373435 373432 373430 GTTTACTCCGAGTAA CGGAG CAC CTCCG TACTCAGCATAATCA plsX 374293 - 373553 - | fatty acid/phospholipid synthesis protein PlsX rpmF 374442 - 374293 - | ribosomal protein L32 NAMH_0426 374781 - 374452 - | hypothetical protein TERM 329 374602 - 374590 - G 73 -7.7 -3.73402 | opp_overlap 374589 ATACTCTTCATCAAA GCCTT TGT AAGGC GGTTTGACAATTTTA NAMH_0427 375196 - 375080 - | nucleoside diphosphate kinase NAMH_0428 375539 - 375267 - | 4Fe-4S ferredoxin, iron-sulfur binding NAMH_0433 377656 - 376238 - | hypothetical protein TERM 330 376522 - 376536 + g 78 -2.2 -5.74086 | TAATATAATTTGTTT TAGTTT TAT AAATTA TTTTTTGTTTAATTT TERM 331 376710 - 376724 + g 79 -4.2 -5.38951 | overlap 376712 TCTTTTGTGTATGTA CCGCAA AGT TTGCCG TTTTTTATATAAGTT NAMH_0434 378393 - 377653 - | von Willebrand factor, type A TERM 332 378052 - 378063 + g 87 -2.2 -6.09196 | TTTTAAGTTATATTC GGCA TCTT TGTC TTTTTTTATTTTAAG NAMH_0435 379187 - 378390 - | putative von Willebrand factor, type A TERM 333 379093 - 379113 + g 71 -3.3 -5.18355 | overlap 379094 ACAATTTTTTTTGCC ACTTCTTTT GAA AAAGGAAGG TTTTTACTTTTTACC NAMH_0436 380041 - 379175 - | von Willebrand factor, type A NAMH_0437 380403 - 380038 - | hypothetical protein NAMH_0438 381209 - 380406 - | hypothetical protein NAMH_0439 382168 - 381206 - | ATPase associated with various cellular activities, AAA_3 TERM 334 382449 - 382435 - g 76 -2.8 -5.49809 | GAAAGTGTAAAAAAA GTCATT ATT AAAGAC GATGGCAGCGGAGTT NAMH_0440 382291 - 382725 + | outer membrane lipoprotein TERM 335 383361 - 383351 - g 70 -4 -4.84359 | TGATCTGCATAAAAA CAAT GTG ATTG AATATAAACCTTTGA NAMH_0442 382722 - 384890 + | hypothetical protein NAMH_0441 386045 - 384873 - | mcp-domain signal transduction protein NAMH_0443 386323 - 386045 - | hypothetical protein NAMH_0444 387861 - 386326 - | putative response regulator receiver domain protein TERM 336 386504 - 386531 + g 83 -2.1 -5.77571 | overlap 386527 TTAAGCCATTTTTCA TTTTTGCTTAA TTTAAT TTTAGCGAAAA TTTTTCTTTTTTCAT TERM 337 386527 - 386537 + g 73 -4 -5.16237 | overlap 386504 TAATTTAATTTTAGC GAAA ATT TTTC TTTTTTCATCAAATT TERM 338 386736 - 386755 + g 84 -3.6 -5.67711 | overlap 386716 GAAGTAACAACTTGT CTTCAAAA ATTG TTTGGAAG TTTTTGTTTTCTTTG NAMH_0445 388007 - 388753 + | hypothetical protein gap 389839 - 388820 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 339 391869 - 391825 - g 78 -7.5 -4.15669 | opp_overlap 391830, overlap 391830 AACTGATAAATTAAA TAAAATCAAAGATATTATC AAAAAAA GATAATTTCTTTGATTATA GACTAAAGTGACAGA TERM 340 391864 - 391830 - g 88 -7.4 -5.06223 | opp_overlap 391830, overlap 391825 ATAAATTAAATAAAA TCAAAGATATTATC AAAAAAA GATAATTTCTTTGA TTATAGACTAAAGTG NAMH_0447 389936 - 391855 + | thymidylate kinase NAMH_0448 392385 - 391921 - | desulfoferrodoxin TERM 341 392251 - 392261 + g 79 -4 -5.46276 | TTTTGTATATCTATT TCTA TTA TAGA TTTTTTCTCTGTATT NAMH_0449 393534 - 392440 - | inner membrane protein YbiR luxS 394064 - 393531 - | S-Ribosylhomocysteinase (LuxS) rpsB 394334 - 395173 + | ribosomal protein S2 TERM 342 395861 - 395821 - g 72 -2.5 -5.21459 | overlap 395829 AAAAAGAAAAAGAAA TTGCAAAAGCTCAACTTCT AAA AGAAGGTAAGCCTGAGCAG GTAATCGATAAAATC TERM 343 395853 - 395829 - g 81 -7.9 -4.287 | overlap 395821 AAAGAAATTGCAAAA GCTCAACTTCT AAA AGAAGGTAAGC CTGAGCAGGTAATCG tsf 395175 - 396098 + | translation elongation factor Ts NAMH_0453 396878 - 397525 + | ABC transporter, ATP-binding protein fliR 397512 - 398279 + | flagellar biosynthetic protein FliR NAMH_0454 398838 - 398269 - | edta-resistant nuclease TERM 344 400421 - 400410 - gH 86 -5.8 -5.5074 | CAATGGAAGAAAAAA CGCT TGGA AGCG TACTGAACATTAACT NAMH_0456 398837 - 400495 + | hypothetical protein NAMH_0457 400497 - 401123 + | guanylate kinase TERM 345 401580 - 401566 - g 73 -7.8 -3.71607 | opp_overlap 401575, overlap 401567 CGAATACTATGTAAA CGACGC CGG GCGTCA GATAACGCTTCTCGG TERM 346 401579 - 401567 - g 73 -9.1 -2.82482 | opp_overlap 401575, overlap 401566 GAATACTATGTAAAC GACGC CGG GCGTC AGATAACGCTTCTCG argS 401120 - 402718 + | arginyl-tRNA synthetase NAMH_0460 402739 - 403167 + | YbbK NAMH_0459 403482 - 403156 - | iojap-related protein nadD 403996 - 403460 - | nicotinate (nicotinamide) nucleotide adenylyltransferase TERM 347 403800 - 403818 + g 72 -6.2 -4.42464 | TCGCTGACTTCAACG TTTTTAAA ATC TTTAAAAA TTTCTTTAAGCCATT gap 404051 - 405028 + | glyceraldehyde-3-phosphate dehydrogenase, type I pgk 405236 - 406432 + | phosphoglycerate kinase tpiA 406429 - 407124 + | triosephosphate isomerase TERM 348 407712 - 407698 - g 74 -6.4 -4.28994 | CAGGACCTATTAAAA CACTTG CGG CAAGCG GTATCGGTGATTTTA NAMH_0465 407124 - 407903 + | enoyl-[acyl-carrier-protein] reductase (NADH) TERM 349 407905 - 407918 + F 90 -5.9 -5.53991 | opp_overlap 407905, overlap 407907 GATATGACGATTAAA CGGGG ATAT TCCCG TTTTTTTAATGAATA TERM 350 408157 - 408147 - f 72 -2.6 -5.51046 | TAAATACACAAAAAA TAAA AAA TTTA CAAGTAAAAATGTAA TERM 351 408813 - 408825 + G 76 -7.7 -4.05208 | opp_overlap 408809 TGGAAATGATATTTA TGCTG TAG CAGCA TTATTTAATGTAGAT TERM 352 409314 - 409304 - g 84 -4 -5.62219 | AATACAGCAAAAAAA TGAA ATT TTCA GCTTTATACTCAATC NAMH_0466 408286 - 409398 + | major outer membrane protein TERM 353 409407 - 409418 + T 100 -7.2 -5.38549 | CTTCTAATCTCTCTT GGGC TTTT GCCC TTTTTATTATTTAAA NAMH_0467 410229 - 409594 - | putative transcriptional regulator, Crp/Fnr family NAMH_0468 411482 - 410229 - | homoserine dehydrogenase TERM 354 410529 - 410541 + g 73 -7.7 -3.88823 | overlap 410523 AAGCGGTTTTTTATA TCCGA GCA TCGGA TTTACGTTTCCTCTT TERM 355 411190 - 411203 + g 84 -8.1 -4.52143 | AGAAGCGCTTTATTT GCCGT TACT ACGGC TTTATTATGTTTAAG NAMH_0469 412686 - 411475 - | aspartate amino transferase NAMH_0470 413453 - 412683 - | hypothetical protein NAMH_0471 414268 - 413450 - | hypothetical protein NAMH_0472 414920 - 414255 - | 23S rRNA methyltransferase TERM 356 414548 - 414538 - G 70 -8.2 -3.1978 | opp_overlap 414536 414533, overlap 414536 ATTTTCATATCAAGA GCGG CGC CCGC ACTGGTTCTGATAAC metK 416219 - 415071 - | S-adenosylmethionine synthetase TERM 357 416237 - 416227 - R 74 -5.4 -4.77165 | opp_overlap 416227 TCTCTCATAACAAAA TCTC CTT GAGA ATTTTTAATTAGAAG NAMH_0474 416592 - 416329 - | hypothetical protein metE 418847 - 416592 - | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase TERM 358 418184 - 418196 + g 77 -4.9 -5.18561 | CTGCAAGTCCGCCGA GTTTA TCG TAAAC TTTTTTAAGTGTTTC TERM 359 418905 - 418940 + r 81 -10 -3.16935 | opp_overlap 418904 418909, overlap 418909 TAAGTTGTGAAGTAG TTAAGTTGTGAAGTTA TAAT TATTTTCACAACTTAA TTACTCAACCTGTTT NAMH_0476 420017 - 418941 - | hypothetical protein NAMH_0477 420646 - 420014 - | uracil-DNA glycosylase NAMH_0478 422111 - 420624 - | MscS Mechanosensitive ion channel TERM 360 421498 - 421517 + g 73 -4.4 -4.88295 | ATAGAAATGATTAGT GAAATAAG TTTG TTTATTTC TTTTTGAATTTCTTT aroB 423133 - 422108 - | 3-dehydroquinate synthase NAMH_0480 424530 - 423142 - | putative TrkA-C TERM 361 424372 - 424387 + g 74 -3.4 -5.34655 | opp_overlap 424367 424371 424369, overlap 424369 TGCATAAAAATTTAT TTTATA AAAA TATAAA TTTTCTTTTTCATTA tgt 424610 - 425746 + | queuine tRNA-ribosyltransferase NAMH_0481 426819 - 425710 - | type IV pilus assembly protein PilZ TERM 362 426037 - 426053 + g 76 -3.7 -5.29885 | opp_overlap 426030 TATAATATCTTCGCA TTGAAGT TCC ACATCAA TTTTATTTTTGGGTT TERM 363 426774 - 426757 - G 76 -2.7 -5.4833 | overlap 426759 GTATTTAATAAAAAA GTTTTTG TTAT CAAGAAC AAAAGAAGAAAAGTT NAMH_0483 427668 - 426820 - | putative lipoprotein NAMH_0484 428258 - 427680 - | N6-adenine-specific methylase TERM 364 428140 - 428152 + g 70 -4.1 -4.67651 | overlap 428140 ACTTCCCATTGAAGT GTGTT AAA AACGC TTTCTTTTAAAATGT NAMH_0485 428535 - 428245 - | hypothetical protein TERM 365 428650 - 428638 - H 72 -3.5 -5.16237 | opp_overlap 428638 AATTCTATCAAAAAA TTAAA CTT TTTAA TATTTTTGACGATAT NAMH_0486 428693 - 429073 + | polar flagellin TERM 366 429230 - 429217 - g 86 -5.3 -5.68438 | TTATTAAAGAAAAAA GAAAG CGCT CTTTC ACAGTTTATTACAAT TERM 367 429493 - 429503 + G 77 -5.4 -4.8622 | ATCGGTGTAGGTGGG GTAG AGA CTAC TTTTTCATTAAAAGC NAMH_0487 429076 - 430782 + | flagellar hook-associated protein 2 fliS 430793 - 431167 + | flagellar protein FliS TERM 368 431260 - 431281 + G 83 -7.3 -4.79223 | opp_overlap 431256 TTGAAAAAACTTGAA CAGGTTGTA CAGA TGCAGCCTG TTTTTGATACTATGG NAMH_0489 431197 - 431448 + | hypothetical protein NAMH_0490 431969 - 431463 - | hypothetical protein NAMH_0491 432932 - 431970 - | C4-dicarboxylate transporter/malic acid transport protein TERM 369 432198 - 432177 - G 83 -2.3 -5.80003 | gap 1, opp_overlap 432182, overlap 432179 CCAAGAAATAAAAAA CTG-CAGTTT AAT AAACTGTCTG AACATTGTTAGCAGT NAMH_0492 433101 - 433571 + | sulfide dehydrogenase TERM 370 433560 - 433576 + T 84 -6.5 -5.31519 | opp_overlap 433554 433560 TTAGGAAAATTTAAA GCGGC ACAATAA GCCGC TTTTTATTTCACTCT ispE 434317 - 433580 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 371 433925 - 433910 - G 75 -4.7 -4.85129 | opp_overlap 433910 ATCATATATGAAAAA CGGTA CATCGC TACCG ATTTTTTTACCGATT csrA 434550 - 434317 - | carbon storage regulator NAMH_0495 435428 - 434544 - | tRNA pseudouridine synthase B NAMH_0496 437452 - 435455 - | ATP-dependent DNA helicase PcrA TERM 372 435982 - 435998 + g 100 -9.5 -4.73973 | opp_overlap 435981 TTTCATGCATCATAC CGTAGAA CTC TTCTACG TTTCTTCTTTTGTCT TERM 373 438011 - 437998 - g 70 -2.3 -5.252 | opp_overlap 437998 GATGTGGAGAAAAAA GCCGT TGAT ATGGC TTTTGTAACCAAAAA TERM 374 438397 - 438383 - g 74 -2.2 -5.46706 | overlap 438385 ATCTTAAAAGAAAAA CATATA TAG TATATA AAGATAAAAATAAAG NAMH_0497 437578 - 438447 + | transcriptional regulator TERM 375 438561 - 438574 + T 79 -6.7 -4.71708 | TAAATATTCTTTTTT GCTGA ACTT TCAGC TTTTGCTTTATTCTT NAMH_0498 439139 - 438723 - | hypothetical protein NAMH_0499 440862 - 439114 - | oligoendopeptidase F TERM 376 439451 - 439465 + g 70 -4.3 -4.68384 | AGAATTACACTTTCA CCAAA CATTT TTTGG TTTTCTTCCATCCAT TERM 377 439669 - 439681 + g 72 -9.1 -2.57344 | opp_overlap 439667 439668 439665, overlap 439656 439668 TTCTGCAAAAATACT TGCGG TTT CCGCA GTTGTAAGAGGAGTA NAMH_0500 441432 - 440875 - | IlvE protein glnA 441525 - 442967 + | glutamine synthetase, type I NAMH_0503 443032 - 444234 + | diguanylate cyclase NAMH_0502 445186 - 444227 - | anthranilate synthase component I and chorismate binding protein pyrB 446071 - 445190 - | aspartate carbamoyltransferase TERM 378 446053 - 446079 + g 79 -3.9 -5.43487 | gap 1, overlap 446056 TTAAATCCGCAGTAT GGG-TTAAATGT TTTG ACATTTAATTCC TTTTTTGTATAATTT TERM 379 446217 - 446231 + r 70 -7.2 -3.66646 | AATGCAGGAGCTGAA GCTTAA TTT TTAAGC TTTAAATAAACTCTT NAMH_0505 447121 - 446219 - | generic methyltransferase NAMH_0506 447390 - 447178 - | putative lipoprotein NAMH_0507 447503 - 448690 + | peptidase family M20/M25/M40 NAMH_0508 448683 - 449303 + | carbonic anhydrase NAMH_0509 450720 - 449395 - | N-acetylmuramoyl-L-alanine amidase TERM 380 449584 - 449595 + g 71 -3 -5.07652 | TACGCCGTTATCCCT TACA TAAT TGTA TTTTGTTTTAAGGGA NAMH_0510 451805 - 450720 - | 2-nitropropane dioxygenase, NPD tyrS 453058 - 451805 - | tyrosyl-tRNA synthetase TERM 381 451883 - 451893 + g 76 -4 -5.243 | TTTTAATATTAGATT TTGA TCA TCAA TTTTTTCCTGGTTTA NAMH_0512 455165 - 453051 - | GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((P)ppGpp synthetase) TERM 382 453228 - 453248 + g 91 -4.7 -5.79595 | opp_overlap 453230, overlap 453230 TCTGCTTAGGAAACT GACGAATTT TGC AAGTTCGCC TTTTTTATTTTGCAG TERM 383 454427 - 454442 + g 77 -3.3 -5.41787 | CAAAATCTTTAAGCC CTTCT TTTAAC AGAAG TTTTTGTATTTTTTG NAMH_0513 455365 - 455162 - | RNA polymerases K / 14 to 18 kDa subunit pyrH 456095 - 455376 - | uridylate kinase TERM 384 456422 - 456407 - gH 74 -3.2 -5.26918 | opp_overlap 456409, overlap 456409 ACAGCTTATAAAAAA TTCGCT TGTA AGCGTA AATTCTAAGACAATA TERM 385 457171 - 457160 - gH 91 -4.4 -5.78622 | TGATTTCAAAAAAAA CCTT CCTA AAGG ATTCAATTATGAAGA NAMH_0515 456306 - 457241 + | ribosomal large subunit pseudouridine synthase D TERM 386 457393 - 457382 - gf 81 -5.8 -4.91987 | AATTCAATAATAAAA CCCA TAAA TGGG AGATGCTAACTACGG TERM 387 457546 - 457535 - gf 86 -5.8 -5.43487 | opp_overlap 457541 AAATTACACAAAAAA CGCT TCCG AGCG TAGCTCCTGTGATAC NAMH_0516 457180 - 458376 + | fibronectin, type III NAMH_0517 458376 - 459494 + | tRNA (guanine-N(7)-)-methyltransferase (tRNA(m7G46)-methyltransferase) TERM 388 459557 - 459568 + G 77 -3 -5.41143 | ATTTTAAAATTTATA CAAA GGAT TTTG TTTTTTTAACGGGTG NAMH_0518 459472 - 460140 + | cell division protein ftse TERM 389 460176 - 460187 + G 89 -3 -5.95539 | TAGCACTTATATCCA TACT TATA AGTA TTTTTTTGTTTAGAC NAMH_0519 460127 - 460912 + | putative cell division protein FtsX TERM 390 461625 - 461611 - g 91 -4.2 -5.81622 | overlap 461612 ATAAAAGTAAAAAAA GTAGGC TCA GCCTAT TACAAACCTAAAACC TERM 391 461624 - 461612 - g 76 -7.7 -4.05313 | overlap 461611 TAAAAGTAAAAAAAG TAGGC TCA GCCTA TTACAAACCTAAAAC NAMH_0520 460909 - 462027 + | M23 peptidase domain protein rho 462337 - 463662 + | transcription termination factor Rho TERM 392 464244 - 464230 - g 72 -5 -4.66264 | TAAAAGTTTTAAAAA GCATTT CCC AAACGC AAAACTAATTCATTC murI 463655 - 464392 + | glutamate racemase NAMH_0523 464428 - 464673 + | prevent-host-death family protein NAMH_0525 464673 - 464930 + | addiction module toxin, Txe/YoeB family NAMH_0524 465196 - 464921 - | plasmid stabilization system NAMH_0526 465335 - 465189 - | hypothetical protein NAMH_0527 466131 - 465496 - | short-chain dehydrogenase NAMH_0528 467339 - 466422 - | radical SAM domain protein TERM 393 467184 - 467196 + g 77 -3.5 -5.43866 | TTTTTCTGCAAGTAT TAAAA CGT TTTTA TTTTTTTGGAAGTTA NAMH_0529 467489 - 471379 + | hypothetical protein TERM 394 471369 - 471393 + T 100 -10.9 -4.28774 | opp_overlap 471369, overlap 471373 CACAGGTTAAAAAAA TAAACTGGTAA CTA TTACCGGTTTA TTTTAGATTAAATGA TERM 395 471393 - 471369 - T 100 -8.7 -5.45726 | opp_overlap 471369 471373 CACAGGTTAAAAAAA TAAACTGGTAA CTA TTACCGGTTTA TTTTAGATTAAATGA TERM 396 471373 - 471389 + T 80 -7.3 -4.72188 | opp_overlap 471369, overlap 471369 GGTTAAAAAAATAAA CTGGTAA CTA TTACCGG TTTATTTTAGATTAA NAMH_0530 472526 - 471801 - | hypothetical protein NAMH_0532 472608 - 472898 + | hypothetical protein NAMH_0531 473317 - 472895 - | xanthine guanine phosphoribosyl transferase TERM 397 473601 - 473627 + G 76 -9.6 -2.92522 | overlap 473604 473605 ATTAGGCTATTTTCT TGATCCGTTTTT TGC AAAAACGGGTTA TATCATATTAACTAC TERM 398 473604 - 473624 + G 80 -9.1 -3.60348 | overlap 473601 473605 AGGCTATTTTCTTGA TCCGTTTTT TGC AAAAACGGG TTATATCATATTAAC TERM 399 473605 - 473623 + G 78 -10.4 -2.75727 | overlap 473604 473601 GGCTATTTTCTTGAT CCGTTTTT TGC AAAAACGG GTTATATCATATTAA NAMH_0533 473389 - 475560 + | hypothetical protein NAMH_0536 476978 - 475905 - | cell cycle protein TERM 400 476441 - 476422 - G 71 -7.9 -3.68324 | opp_overlap 476420, overlap 476420 TATTTGTAATAAATA GGTGCAA ATAATA TTGCACC GATACTTAATGTTAT NAMH_0537 478411 - 476975 - | methyl-accepting chemotaxis sensory transducer TERM 401 477084 - 477096 + g 86 -2.7 -5.86976 | overlap 477085 ATGGTCTGTTCTTTA TTTGT GAT ACAAG TTTTTTCTTTTGTAC TERM 402 477178 - 477192 + g 73 -4.2 -5.00765 | overlap 477179 TAATTGTTTTATATT CCGGAT AGC ATCCGA TTTTTCTCATTGATT TERM 403 477179 - 477191 + g 71 -7.7 -3.58832 | overlap 477178 AATTGTTTTATATTC CGGAT AGC ATCCG ATTTTTCTCATTGAT TERM 404 477252 - 477265 + g 73 -3.9 -5.11063 | CATTCATTTTCAGAT GAAAT ATCG ATTTC TTTTTCTTCGATAAT NAMH_0538 478934 - 478401 - | PAS NAMH_0539 479308 - 478931 - | hypothetical protein NAMH_0540 479492 - 479295 - | hypothetical protein gidB 480019 - 479492 - | methyltransferase GidB NAMH_0542 480693 - 480016 - | NADH dehydrogenase ribA 481250 - 480693 - | GTP cyclohydrolase II TERM 405 481576 - 481564 - g 84 -6.3 -5.07567 | TGATATTTGAAAAAA GTTCT ACA AGAAC AAGGGTTTCTTTTGA argF 481416 - 482345 + | ornithine carbamoyltransferase NAMH_0545 482330 - 482707 + | hypothetical protein TERM 406 482723 - 482709 - f 70 -7.2 -3.62491 | opp_overlap 482709 AAAAAATCTTCTAAA GGAAAA AAT TTTTCC TTTTTGTTAAATTAT TERM 407 482709 - 482723 + F 91 -7.2 -5.14645 | opp_overlap 482709 AAAAAATCTTCTAAA GGAAAA AAT TTTTCC TTTTTGTTAAATTAT NAMH_0546 482801 - 483553 + | alkyl hydroperoxide reductase TERM 408 483556 - 483614 + F 74 -8.7 -3.25942 | gap 1, overlap 483560 CAAAGAAGCTTAATT CTTTCTTTTTTCTTTTCTTTAAATATTC AAAG GAATTTTTAAAGAAAAGAAATGA-AAGG TTAGTATGAAACAAT NAMH_0547 483620 - 484021 + | peroxide stress regulator NAMH_0549 484037 - 484312 + | hypothetical protein pyk 485691 - 484309 - | pyruvate kinase TERM 409 485786 - 485806 + r 77 -8.5 -3.7076 | opp_overlap 485783 485790, overlap 485783 485785 485790 AAGAGGGAGAAAGCT TAAAGTTAA GCT TTAACTTTA TTAATATTTTTTCTT NAMH_0550 486151 - 485807 - | periplasmic nitrate reductase, NapD subunit NAMH_0551 487102 - 486161 - | periplasmic nitrate reductase, NapL subunit NAMH_0552 487581 - 487111 - | periplasmic nitrate reductase, NapF subunit TERM 410 487559 - 487541 - G 100 -11.8 -4.32903 | ATGAAAGATTTAAAA GGAGAGTT TTT AACTCTCC TAAAAAAAGAACGTC napB 488054 - 487581 - | periplasmic nitrate reductase, diahem cytochrome C subunit NAMH_0554 488880 - 488035 - | periplasmic nitrate reductase, NapH subunit NAMH_0555 489689 - 488868 - | periplasmic nitrate reductase, NapG subunit TERM 411 489645 - 489617 - G 89 -11.8 -3.30635 | gap 1, opp_overlap 489634, overlap 489619 CAAACCCTGCGACAA TAGTGCCGGCAGC AGTT GCTGCCG-CACCA GCTTGAATTAGGTTT TERM 412 489643 - 489619 - G 89 -12.2 -3.21772 | gap 1, opp_overlap 489634, overlap 489617 AACCCTGCGACAATA GTGCCGGCAGC AGTT GCTGCCG-CAC CAGCTTGAATTAGGT napA 492511 - 489698 - | periplasmic nitrate reductase, NapA large catalytic subunit TERM 413 491891 - 491879 - G 74 -6.3 -4.44046 | opp_overlap 491878 491879 TGCACCCCAAACAAA TACTG TAT CAGTA ATTTCAATATCATCA TERM 414 492288 - 492267 - G 71 -8.9 -3.07005 | opp_overlap 492265 492264, overlap 492269 AAGTAACCTTTAATA CAGTTAATA CCTC TATTAACTG GACTTTCAGGGTCAC TERM 415 492660 - 492670 + H 85 -2.6 -6.19443 | overlap 492654 ATATATATGTAATAT TTTA TAT TAAA TTTTTTTTTGATATA TERM 416 493317 - 493307 - g 72 -2.6 -5.22258 | CAAATTAAAAGAAAA TTTT ATT AAAA ATGTAAGAGGAAGCG NAMH_0557 492708 - 493358 + | two component transcriptional regulator, winged helix family TERM 417 494180 - 494191 + G 70 -4.4 -4.77165 | CTGTTTTCTTAGCTA TACC TCTT GGTA TTTTCTTCTCAAAGC NAMH_0558 493342 - 494967 + | PAS/PAC sensor signal transduction histidine kinase napC 495104 - 495658 + | periplasmic nitrate reductase, NapC membrane bound tetraheme cytochrome C subunit TERM 418 495647 - 495669 + F 79 -7.1 -4.49364 | opp_overlap 495647, overlap 495651 CTTGAAAGATTAAAT GAAGGAGAA TAATT TTCTCTTTC TTTCTTATTAAATTT TERM 419 495651 - 495665 + F 70 -4.3 -4.78597 | opp_overlap 495647, overlap 495647 AAAGATTAAATGAAG GAGAA TAATT TTCTC TTTCTTTCTTATTAA NAMH_0560 495888 - 496310 + | Wp TERM 420 496862 - 496886 + G 93 -9.4 -4.61868 | opp_overlap 496861 496864 TTTTATCAAGCAAGT TATTTCCCTG ATGAG CAGGGAAGTA TTTTATCTGTAAATC NAMH_0561 496307 - 498751 + | cytochrome c biogenesis protein TERM 421 499763 - 499750 - g 80 -6.7 -4.8048 | TTTTTACAGGAAAAA GCACA TGAA TGTGC CGATACTGCGCTTAA hemA 498754 - 500013 + | glutamyl-tRNA reductase hemE 500076 - 501098 + | uroporphyrinogen decarboxylase hemB 501098 - 502078 + | delta-aminolevulinic acid dehydratase TERM 422 502109 - 502099 - f 72 -2.6 -5.43866 | TAATTTTTAAAAAAA TATA AAT TATA AAGGGAGAAAATGAA hemC 502120 - 502995 + | porphobilinogen deaminase hemN 503015 - 504379 + | oxygen-independent coproporphyrinogen III oxidase NAMH_0567 504389 - 505087 + | hypothetical protein NAMH_0568 505087 - 505641 + | DJ-1 NAMH_0570 505667 - 505960 + | hypothetical protein hypA 506316 - 505957 - | hydrogenase nickel insertion protein HypA TERM 423 506691 - 506681 - g 70 -4 -4.95211 | opp_overlap 506681 AAAAAATCAAGAAAA TAGT TGA ACTA TATTTTAATATGGCG TERM 424 506708 - 506729 + G 72 -5.9 -4.31397 | ATTTTAATATGGCGC TTAACGAGC CCGA GCTTGTTGA TTATTTTATGAGAGT NAMH_0571 506389 - 507009 + | transcriptional regulator, TetR family TERM 425 507544 - 507564 + G 78 -7.7 -4.1585 | opp_overlap 507537 AGAAAATTTCGGAAC TAAAGAAGG GTG CCTTTTTTA TTTTCAAGGTTGTCA NAMH_0572 506993 - 507859 + | NADH ubiquinone oxidoreductase, 20 kda subunit NAMH_0573 507846 - 509009 + | nickel-dependent hydrogenase, large subunit NAMH_0574 509104 - 510237 + | quinone-reactive Ni/Fe-hydrogenase small chain TERM 426 510867 - 510836 - g 83 -7.4 -4.68593 | GCCATTATTTAAAAA CACTTGAAATGCAA AGAA TTGCAGCTCAAATG ATGGCTATTTTCGGT NAMH_0575 510241 - 511980 + | quinone-reactive Ni/Fe-hydrogenase large chain TERM 427 512221 - 512236 + G 93 -6.2 -5.77734 | TGCAATGATAGGTGC CGTTTT ATAT AAAACG TTTTTCTTTTTCTTT cybH 511991 - 512683 + | Ni/Fe-hydrogenase, B-type cytochrome subunit TERM 428 512688 - 512704 + F 100 -10.9 -4.20806 | AAGACCATTAATTTC TTTCCCC TTT GGGGAAA TTTAATTTTACAATG hybD 512814 - 513392 + | hydrogenase expression/formation protein NAMH_0578 513469 - 515202 + | hypothetical protein hypF 515322 - 517601 + | [NiFe] hydrogenase maturation protein HypF NAMH_0579 518155 - 517598 - | hypothetical protein TERM 429 517952 - 517966 + g 73 -3.6 -5.15634 | TCTTACATCAACAAT GGTAAA ATC TTTATC TTTTTTCATCCAATC NAMH_0582 518235 - 518876 + | putative carbon monoxide oxidation system transcription regulator CooA-1 NAMH_0581 519707 - 518844 - | permeases of the drug/metabolite transporter (DMT) superfamily TERM 430 519579 - 519528 - G 72 -9.2 -2.52543 | opp_overlap 519517, overlap 519540 519541 AGCGGCTTTAATGGA GTTTTTATCAAAGCTTATTTTTTT GTAA AAAATAATAAACATTAATAAAAAC GCCAAAAAAAATCTT TERM 431 519693 - 519715 + g 80 -6.3 -4.65819 | opp_overlap 519693 519692 TAAAAGCAAAAAATC GGCGAAATT GATCA AATTCCGCC TTTTGCTTTCATTTT NAMH_0583 520660 - 519704 - | permease of abc transporter TERM 432 520477 - 520503 + g 71 -3.1 -5.16132 | gap 1 GTTTAACAATAAGTT TTCC-GTCACAT GGAG ATGTGAGAGGAA TTTTCTTTTCATATA TERM 433 520627 - 520612 - G 95 -9 -5.24647 | opp_overlap 520612 520611 ACACATAAAATAAAA GGGCAA AAAT TTGCCC GATTTTTCTATCTTT NAMH_0584 521457 - 520657 - | binding component of abc transporter TERM 434 521498 - 521525 + r 100 -13.6 -3.92716 | opp_overlap 521503, overlap 521493 521490 521501 AAGTTTTTAAGTTGT GAAGAGGTGAAG TTTT TTTCACCTCTTC TTTAGCTTCTTTTAG TERM 435 521501 - 521522 + r 86 -9.5 -4.05677 | opp_overlap 521503, overlap 521498 521493 521490 TTTTTAAGTTGTGAA GAGGTGAAG TTTT TTTCACCTC TTCTTTAGCTTCTTT NAMH_0585 522274 - 521537 - | amino acid permease ATP-binding protein TERM 436 521682 - 521700 + g 91 -11.8 -3.68757 | overlap 521671 CTTGCGAATCCCATT TCGTGTGT TAC ACACACGA TTGTATAGTTTTCAC NAMH_0586 523101 - 522283 - | amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family TERM 437 522397 - 522384 - G 79 -5.3 -5.1417 | CTACAAAACTAAAAA TCTCA AAGC TGAGA TAAAGTCTGTTGTTT NAMH_0587 523807 - 523094 - | amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine NAMH_0588 524630 - 523848 - | extracellular solute-binding protein, family 3 TERM 438 523878 - 523895 + g 82 -5.6 -5.28826 | overlap 523875 TTCCGGAAGTCTGTT TGGTTC TGTTCC GAACCA TTTTTTGTAAAGTTT NAMH_0589 525330 - 524716 - | hypothetical protein TERM 439 525316 - 525329 + g 76 -6.7 -4.51097 | opp_overlap 525315 ATAATATGATGTAAT TGGCA AAGT TGCCA TTTTATACTCCTTAA NAMH_0590 526039 - 525341 - | putative flagellin TERM 440 526281 - 526258 - g 75 -9 -3.38261 | opp_overlap 526250, overlap 526250 CAATAATCAAACATA TTGTTGGCTT GTTA AAACCAACAA GCGGAGAAGTCCTCG TERM 441 526788 - 526813 + G 73 -9.1 -2.80074 | opp_overlap 526786 ATAGAATACGGAACT GTGGATGAGTT TAAA AACTCATCCAA TCCTATTGTACAGGC NAMH_0591 526119 - 526880 + | toluene tolerance protein ttg2a NAMH_0593 526990 - 527724 + | hypothetical protein NAMH_0592 527931 - 527716 - | hypothetical protein TERM 442 527989 - 527974 - R 72 -4.8 -4.76312 | opp_overlap 527966, overlap 527966 TATAACACTTAAAAA TTTAAG TTTT CTTAAA AATAACATTTTGTTA dapE 529099 - 528002 - | succinyl-diaminopimelate desuccinylase TERM 443 529633 - 529619 - g 80 -2.9 -5.61824 | overlap 529611 TAAAATTTAAAAAAA CTAAA TTTTT TTTAG AAACAACTTTTAAAT NAMH_0596 529168 - 530046 + | putative NH2 terminus uncertain TERM 444 530050 - 530033 - T 77 -4.3 -5.17054 | opp_overlap 530033, overlap 530022 ATAATATTGAAAAAA TTATTTA TAAT TAAATAA TTTTCCAATAAACCT NAMH_0595 530512 - 530033 - | tellurite resistance protein TehB TERM 445 530671 - 530644 - g 71 -6.4 -4.21701 | opp_overlap 530652, overlap 530640 ACAAAATTATAGAAA TCAGAAGACATA TACA TATGTATCCTGA CCTCTCTGGTGAGGA TERM 446 531667 - 531653 - g 70 -4.3 -4.72007 | TTGCAGTAAAAGAAA GGATA CGTGT TATCC TCAGCATCATCCGAA NAMH_0597 530595 - 531755 + | N-acyl-L-amino acid amidohydrolase NAMH_0599 531752 - 532759 + | acetyltransferase, gnat family NAMH_0598 533300 - 532746 - | hypothetical protein NAMH_0600 533635 - 533297 - | putative lipoprotein NAMH_0601 533698 - 534369 + | ABC transporter, ATPase subunit TERM 447 534929 - 534915 - g 93 -8.6 -4.7629 | GTATGAACGCAAAAA CGCTAA AAA TTAGCG GAATAGTAGGCATTA NAMH_0602 534371 - 535579 + | efflux ABC transporter, permease protein TERM 448 535692 - 535712 + G 76 -2.5 -5.4477 | AAGTACAAACGGCAA GCACCCT ACGGGTA AGTGTGC TTTTTTTAACGCTTT NAMH_0603 535600 - 535758 + | hypothetical protein NAMH_0604 535793 - 536491 + | hypothetical protein NAMH_0605 536513 - 537550 + | hypothetical protein TERM 449 537768 - 537794 + G 89 -9.4 -4.18164 | opp_overlap 537764 537763 ATAAAATAGACCCTA CATCTCCTACAC AAA GGGTAGGTGATG TTGTTTTAGAAGGTT TERM 450 539054 - 539027 - g 93 -9.3 -4.62302 | overlap 539052 GAAGATCTTGAAAAA CTGCCTCTTTT TGCAAG AAAAAAGGCAG AAAATCTGGTCAATG ligA 537602 - 539572 + | DNA ligase, NAD-dependent TERM 451 539905 - 539874 - g 80 -2.9 -5.63645 | opp_overlap 539878 TTAAAATAGAAAAAA CGCATACCTTGGC ACGTCA GGCAGGGTATCCG TTAAGAGCAGTAATG clpS 539639 - 539932 + | ATP-dependent Clp protease adaptor protein ClpS TERM 452 540530 - 540499 - g 91 -5.3 -5.85178 | gap 2, overlap 540502 540503 AAGACGTAAAAAAAA CAA-T-CCGGTTCTC GTGG GAGAACCGGGAGTCG GAAAGACTGCGATTG TERM 453 540525 - 540502 - g 100 -11 -4.97383 | overlap 540499 540503 ACGTAAAAAAAACAA TCCGGTTCTC GTGG GAGAACCGGG AGTCGGAAAGACTGC TERM 454 540524 - 540503 - g 100 -14.5 -3.5599 | overlap 540502 540499 CGTAAAAAAAACAAT CCGGTTCTC GTGG GAGAACCGG GAGTCGGAAAGACTG TERM 455 541922 - 541908 - g 75 -4.9 -4.84359 | TGACCCTCACAAAAA GAGCG AAAAA CGCCC TTGCGAAAAAAGGAT NAMH_0608 539933 - 542095 + | endopeptidase clp ATP-binding chain a TERM 456 542354 - 542335 - g 83 -5 -5.43514 | overlap 542328 542327 AAAACAACCAAAAAA CTTTTGAG AAAA CTCAGAAG CCCCAAATGGGAATT aat 542092 - 542832 + | leucyl/phenylalanyl-tRNA--protein transferase pgi 542856 - 544073 + | glucose-6-phosphate isomerase NAMH_0610 544680 - 544063 - | hypothetical protein TERM 457 544124 - 544151 + g 71 -6.5 -4.15453 | ACCGTTTCGCCGGGA TAGAGTTTATT GTCTGA AATAAGCTCTA TTTTACCGTCGCTTC TERM 458 545035 - 545025 - g 79 -4 -5.54079 | TTAAAAATGAAAAAA CAAA ACT TTTG AATTTAAATGAGGGA TERM 459 545560 - 545543 - g 73 -4.1 -4.84761 | overlap 545529 ATACCTGTAGAAAAA TTTCCAG GTAT CGGGAAA AGAATAGAAAAAAGG TERM 460 546098 - 546110 + G 72 -9.1 -2.73542 | opp_overlap 546097 TTAAGAAGCAGATAC GGGCT TTC AGCCC TGATTAGCGCTTCGG NAMH_0612 544898 - 546136 + | DNA-directed DNA polymerase flgG 546927 - 546139 - | flagellar basal-body rod protein FlgG NAMH_0614 548060 - 547275 - | flagellar basal-body rod protein TERM 461 548118 - 548136 + H 70 -7.4 -3.61178 | opp_overlap 548117 548130 ATTTTTAGTATAATT CCACTCTT AAA ATGAGTGG TTTGCAATCGATAGC TERM 462 548178 - 548130 - H 93 -11.2 -4.11394 | opp_overlap 548118, overlap 548117 ATTCCACTCTTAAAA TGAGTGGTTTGCAATCGATAGC GTTAA ACTATCCATTGCACACTACTCA CACAAAAAAAGGAGC TERM 463 549195 - 549184 - g 70 -4.4 -4.81551 | TATGGATATCAAAAA GCTT GTAG AAGC AAAAAAAGCCAGTGA TERM 464 549779 - 549747 - g 72 -4.9 -4.68724 | overlap 549742 TTATCGAAGATAAAA CATTTACGAACCCTT ATG AAGAGGTTGTAAACG AGGATCTTAGAAAAC NAMH_0615 548198 - 550012 + | rna polymerase sigma factor TERM 465 550061 - 550041 - g 79 -9.1 -3.45321 | overlap 550027 ATGGAGAATTGAGAA TGGAGAATT ATA AACTCTCCA ACGTTGGGAAATGGG nadE 550019 - 550855 + | NAD+ synthetase lpxK 550870 - 551772 + | tetraacyldisaccharide 4'-kinase TERM 466 552036 - 552026 - g 80 -6.8 -4.65819 | opp_overlap 552026 AAAATCAAATGAAAA CCTG TAT CAGG TCTATCTACTTCAAA NAMH_0618 551775 - 552332 + | hypothetical protein TERM 467 552697 - 552686 - g 73 -4.4 -4.90079 | opp_overlap 552673 AGTGCAACAAGAAAA GACA ATCT TGTC GCAGTTGTTTTTGAA NAMH_0619 552329 - 553336 + | putative lipoprotein TERM 468 553469 - 553446 - g 86 -2.5 -5.80248 | opp_overlap 553446 553463, overlap 553448 553463 GAATATATAAAAAAA CCTATTATC GAAGCA GATAATATG GATATTATTTCCTTT NAMH_0620 553329 - 554156 + | phage integrase NAMH_0621 554159 - 554482 + | hypothetical protein NAMH_0622 554469 - 555077 + | transcriptional activator, putative, Baf family TERM 469 555186 - 555176 - g 70 -4 -4.89567 | overlap 555180 TTTGAAAACAGAAAA CTTA TTT TAAG AAAAGCGGGATTTAC hisG 555074 - 555691 + | ATP phosphoribosyltransferase NAMH_0624 555681 - 556352 + | hypothetical protein nth 556997 - 556353 - | endonuclease III TERM 470 556947 - 556963 + g 71 -6.7 -4.17958 | TCCTTTATAATGTTC TAAAAAG CGT CTTTTTA TTTCTTCAAGCTCTT NAMH_0626 557096 - 557812 + | hypothetical protein TERM 471 558286 - 558275 - g 71 -3 -5.15969 | GCGGAAGTTAAAAAA TTCT ATGA AGAA AACAAAGATATATAT TERM 472 558432 - 558416 - g 79 -5.2 -5.06414 | GCGCTTGAAGAAAAA TTTGCA GAACT TGCAAA AAAATATTCAACAGG NAMH_0627 557873 - 558733 + | foldase protein PrsA TERM 473 559615 - 559594 - g 84 -8.1 -4.56775 | ACGGTGTTGTAAAAA TGAATATCG ATAC CGATACTCA GTGGGCGTTCTGGGC fbaA 558744 - 559808 + | fructose-bisphosphate aldolase, class II TERM 474 559844 - 559822 - g 75 -10 -2.74982 | overlap 559821 559819 AATGAATAATAATAG TTGGAGAATC GAA AATTCTCCAA TAACCCCTTTTTTCT NAMH_0629 559808 - 560680 + | hypothetical protein NAMH_0630 560846 - 562705 + | hydrogenase, EchA subunit NAMH_0631 562702 - 563541 + | EchB NAMH_0632 563544 - 564038 + | hydrogenase-4 component I NAMH_0633 564028 - 564399 + | putative F420H2:quinone oxidoreductase, 39.7 kDa subunit TERM 475 564436 - 564454 + G 74 -3.1 -5.27335 | gap 1 ATCACAGCATGTTGC GCT-GCCG GAGC CGGTGAGC TTTTTATTTGAAACA NAMH_0634 564392 - 565477 + | Ech Hydrogenase, Subunit TERM 476 565542 - 565522 - g 73 -9.1 -2.80873 | opp_overlap 565522, overlap 565521 565520 AGTCACTAAAAAACC TCGTTTCAA AGC CTGAAACGA TTAAATATCCTTTTG TERM 477 565522 - 565542 + G 70 -8.4 -3.18796 | opp_overlap 565522 565521 565520 AGTCACTAAAAAACC TCGTTTCA AAGCC TGAAACGA TTAAATATCCTTTTG NAMH_0635 565488 - 565994 + | NADH-ubiquinone oxidoreductase 23 kda subunit TERM 478 566051 - 566028 - f 90 -11.2 -3.79906 | overlap 566043 TTAGGTGTATAATAA CCTTATGAAT ATAA ATTCATAAGG ATCCGCTATGAAAAT NAMH_0636 566059 - 566970 + | putative D-3-phosphoglycerate dehydrogenase NAMH_0637 566971 - 567327 + | putative lipoprotein NAMH_0642 568009 - 568200 + | hypothetical protein NAMH_0643 568754 - 568203 - | hypothetical protein NAMH_0644 569571 - 568744 - | hypothetical protein crcB 569957 - 569571 - | CrcB protein NAMH_0646 570709 - 570017 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase NAMH_0647 571661 - 570693 - | hypothetical protein TERM 479 570913 - 570897 - G 73 -3.7 -5.04601 | GTTATAAACTAAAAA CCCTGTT AAT AACAAAG GAGGAATAAGTAACC NAMH_0648 572758 - 571658 - | peptidase M23B TERM 480 572374 - 572344 - G 73 -4.3 -5.00616 | gap 2, opp_overlap 572345 572346 572350 572351, overlap 572346 572349 TTCTGTCTGAAAAAA TATAAGCGAGTTTAG AAG CTAAACTC-CTTA-A TTTTGTGGCTTTGTA TERM 481 572345 - 572374 + g 74 -5.9 -4.52803 | gap 1, opp_overlap 572344 572346 572349, overlap 572346 572350 572351 TCTGTCTGAAAAAAT ATAAGCGAGTTTAG AAG CTAAACTC-CTTAA TTTTGTGGCTTTGTA TERM 482 572346 - 572373 + g 77 -9.4 -3.30597 | gap 1, opp_overlap 572344 572346 572349, overlap 572345 572350 572351 CTGTCTGAAAAAATA TAAGCGAGTTTAG AAG CTAAACTC-CTTA ATTTTGTGGCTTTGT TERM 483 572373 - 572346 - G 89 -9.4 -4.13561 | gap 1, opp_overlap 572346 572345 572350 572351, overlap 572344 572349 CTGTCTGAAAAAATA TAAGCGAGTTTAG AAG CTAAACTC-CTTA ATTTTGTGGCTTTGT TERM 484 572370 - 572349 - G 71 -6.7 -4.18465 | gap 1, opp_overlap 572346 572345 572350 572351, overlap 572346 572344 TCTGAAAAAATATAA GCGAGTTTAG AAG CTAAACTC-C TTAATTTTGTGGCTT TERM 485 572350 - 572370 + g 70 -6.9 -3.76789 | opp_overlap 572349 572346 572344, overlap 572346 572345 572351 CTGAAAAAATATAAG CGAGTTTAG AAG CTAAACTCC TTAATTTTGTGGCTT TERM 486 572351 - 572369 + g 79 -10.4 -2.84989 | opp_overlap 572349 572346 572344, overlap 572350 572346 572345 TGAAAAAATATAAGC GAGTTTAG AAG CTAAACTC CTTAATTTTGTGGCT purQ 573423 - 572755 - | phosphoribosylformylglycinamidine synthase I purS 573662 - 573423 - | phosphoribosylformylglycinamidine synthase, PurS protein purC 574366 - 573659 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 487 574321 - 574335 + g 70 -3.6 -5.01042 | CTTCGTTAGGGTTTT GAGTTT CAT AAATTC TTTTTGCTTTACCTT NAMH_0652 575613 - 574363 - | tail-specific protease TERM 488 574586 - 574596 + g 76 -6.8 -4.57218 | opp_overlap 574586 TGAACAATAATATCA GGTG TAA CACC TTTTGCTTGTATTGT TERM 489 575619 - 575629 + H 79 -6.8 -4.69622 | overlap 575627 ACTTTTTCAAAGCTG CTCC TTC GGAG TTTTTGAAATTCTAT NAMH_0653 575813 - 576295 + | chaperone ClpB TERM 490 578204 - 578167 - f 71 -7 -4.15088 | AAAATTACAAAAAGA CTGGCTGAGAGAGAAA TTGAGC TTACTCTCACAGACAG AGTTAAAGAGGTTAT NAMH_0654 578594 - 578959 + | hypothetical protein TERM 491 579425 - 579412 - g 82 -3.1 -5.64274 | TCATTCAGAAAAAAA CCTTC AAGA AAAGG GATAGAAACACTTGA NAMH_0655 579001 - 579585 + | PAS NAMH_0656 579589 - 581064 + | methyl-accepting chemotaxis sensory transducer TERM 492 581533 - 581512 - g 77 -3.2 -5.51165 | AAAACCGGAAAAAAA TATTAAAT TTAATG ATTTAATA AAAGGTGATTTTGAT gltX 581066 - 582370 + | glutamyl-tRNA synthetase NAMH_0658 582367 - 582642 + | yggt family protein TERM 493 583333 - 583308 - g 76 -2.7 -5.41143 | CAGCTGGCAAAAAAA GTTCTTTATTC AATA AAACAAAAAAC TACAAAAATATATTT TERM 494 583465 - 583451 - g 74 -5.8 -4.61527 | AAAAGCCGGGAAAAA GTTTTT TAT AAAAAC CAATATAATTTACAA NAMH_0660 582639 - 584126 + | transglycosylase SLT domain protein NAMH_0659 584556 - 584116 - | putative lipoprotein NAMH_0661 584601 - 585131 + | hypothetical protein NAMH_0662 585192 - 585407 + | hypothetical protein NAMH_0663 585469 - 585954 + | transformation system protein TERM 495 587946 - 587965 + G 74 -9.4 -3.14132 | AATTGTTGAACCGGG CGATAAAG AACT CTTTATCG TTACTAAAAAAGGCA gyrA 585997 - 588447 + | DNA gyrase, A subunit NAMH_0665 588437 - 589096 + | hypothetical protein NAMH_0666 589302 - 589430 + | hypothetical protein NAMH_0667 589430 - 590545 + | signal-transduction regulatory protein asd 590555 - 591586 + | aspartate-semialdehyde dehydrogenase NAMH_0669 591586 - 592110 + | hypothetical protein NAMH_0670 592135 - 593031 + | radical SAM domain protein TERM 496 593507 - 593519 + G 80 -2.7 -5.64421 | overlap 593508 GTAAAAATAATATAT TTGAT TAT ATCAG TTTTTTATTTGGAGT NAMH_0671 593098 - 593604 + | hypothetical protein NAMH_0673 593653 - 594723 + | hypothetical protein NAMH_0672 595505 - 594720 - | hypothetical protein TERM 497 595201 - 595191 - G 84 -4 -5.70522 | opp_overlap 595192 AATAATAATAAAAAA TGTT GCA AACA GTGTAACTATTATGA NAMH_0674 595580 - 596476 + | cytochrome c551 peroxidase TERM 498 597227 - 597237 + G 70 -4 -4.90302 | TTATTGTAATTGTAA TAAC GGT GTTA TTTGTTTTATTGATC NAMH_0675 596473 - 598503 + | ggdef family protein TERM 499 598976 - 598966 - g 84 -4 -5.71712 | GTTTATAGAAAAAAA GATA AAC TATC AGGCTCTTAGCGAAT TERM 500 600166 - 600129 - g 72 -2.8 -5.28561 | gap 1, opp_overlap 600132 600132 600141, overlap 600132 600141 AAGAGATAATAAAAA CAGGACACAAAAGATAC AAACA GCATCTTTGGAGTC-TG TATCTTTTCAGTCGT asnB 598505 - 600205 + | asparagine synthase (glutamine-hydrolyzing) TERM 501 600403 - 600392 - g 71 -3 -5.03405 | AATACGACAGAAAAA CAAA AGAG TTTG AACTTTTAGGTACTT NAMH_0678 600202 - 600969 + | hypothetical protein NAMH_0677 601721 - 600966 - | NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg TERM 502 601096 - 601112 + g 84 -3.8 -5.63857 | TCCGCACTTAGCGGC GTATAT CCTTC ATATAC TTTTTTTGCCTTTTT NAMH_0679 603329 - 601731 - | methyl-accepting chemotaxis sensory transducer TERM 503 602166 - 602184 + g 73 -7.4 -3.72576 | overlap 602146 GTGTTCTCCAGCACG TGCCGC TTCTATT GCGGCA TTTAGTGCAAGAAGA TERM 504 602284 - 602297 + g 71 -5.3 -4.59293 | TGTTTTATTTTTTCT GAAAG TTCG CTTTC TTTATTTGATATTTC TERM 505 603569 - 603588 + r 82 -10.8 -2.62311 | opp_overlap 603567, overlap 603573 CAGAAGTAGAGTACC CTAAGCGT CTAC ACGCTTAG TCCGTTGATTATACT TERM 506 603785 - 603766 - R 84 -10 -3.39432 | opp_overlap 603770 603780, overlap 603754 AAACTACTTAATTAA GCAGCAGC TCTA GCTACTGC TGGGCTGTAATTTGT TERM 507 603941 - 603887 - R 80 -9.5 -3.53444 | gap 2, overlap 603892 CTACCCCTGTCGAAA TCCA--AGTCATCCCCGGGAGATTCTC TAT AAGAACCACCCGCGAATGACTAATGGA ATAATATCAAATTTT TERM 508 603934 - 603892 - R 100 -14.2 -3.27525 | overlap 603887 CCTGTCGAAATCCAA GTCATCCCCGGGAGATTCTC TAT AAGAACCACCCGCGAATGAC TAATGGAATAATATC trpA 604804 - 604082 - | tryptophan synthase, alpha subunit TERM 509 605334 - 605313 - g 72 -8.1 -3.34486 | AGGAAAAGATGAAGA CTCAAGAAA AAGA CTTCTTGAG GATGCAAAGGCTATC TERM 510 605445 - 605427 - g 73 -8.2 -3.64103 | TACGGAGAGTGTAAA TATCCCGA CTA TCGGAATA GGTGCCGGAAGATAT TERM 511 605610 - 605598 - g 79 -5.5 -5.1615 | GGAAGATGTAAAAAA CGGAA AAT TCCCG GGTGAAGAGGAAATA panB 604855 - 605631 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase ruvB 605631 - 606623 + | holliday junction DNA helicase RuvB TERM 512 607169 - 607155 - g 77 -5 -5.06414 | opp_overlap 607155 CCTTTGGAAGAAAAA CAGCTT GAA AAACTG TTTTTCGGAACAAGC NAMH_0684 606633 - 607631 + | acid membrane antigen A TERM 513 608263 - 608246 - g 72 -2.7 -5.26316 | opp_overlap 608246 TGAGTCGATAAAAAA GCTTTAT AAAT ATGAAGC TTTTAATAAGAAATT TERM 514 608332 - 608350 + G 82 -7.5 -4.53349 | AGTTCAATTTTAGTT CTTATCC AAAAG GGATAAG TTTCTTTGATGATTA TERM 515 608432 - 608411 - g 73 -4.6 -4.8543 | opp_overlap 608413 TAATGTTTACAAAAA TATATTAC TTGTGG GTAATATA TATACGGATTTTTTT NAMH_0685 607734 - 608480 + | putative heat-inducible transcription repressor HrcA TERM 516 608575 - 608564 - g 74 -3 -5.26119 | overlap 608544 GCTTCAAAAACAAAA TGAA GAGC TTCA GGCTAAACTTGATGA TERM 517 608647 - 608630 - g 82 -8.5 -3.96497 | overlap 608627 CGAAAACGATAAGAA GCTTCTT CAAA AAGAAGC AGACAGTGCAATAGA TERM 518 608768 - 608754 - g 74 -6.4 -4.3277 | GATATAGAAGATAAA GCCGAA GCG TTCGAC AAACTTCTTGAAGGT TERM 519 608846 - 608878 + G 74 -9.3 -3.02511 | opp_overlap 608849 TATTGAGCCGGTAGA GCATGATGAATTTAA CCC TGAAATTCATCAGGC TATTCAGCAGGTACA grpE 608481 - 608999 + | co-chaperone GrpE dnaK 609017 - 610897 + | chaperone protein DnaK TERM 520 610883 - 610908 + T 100 -10.5 -6.25578 | opp_overlap 610889, overlap 610886 GACGACGTTATCGAT GCAGAAGTGGA ATAA TCCACTTCTTC TTTTTTTTATTTACT TERM 521 610886 - 610905 + T 100 -10.8 -5.11881 | opp_overlap 610889, overlap 610883 GACGTTATCGATGCA GAAGTGGA ATAA TCCACTTC TTCTTTTTTTTATTT NAMH_0688 612793 - 611087 - | mechanosensitive ion channel family protein TERM 522 611310 - 611296 - G 73 -4.3 -4.84359 | CCATTTCCATAAAAA CAACA AGTGG TGTTG TGTCAAGAGTTGAAT TERM 523 612202 - 612213 + g 74 -3 -5.24515 | TATATAATTTTTTTA CATT ATTT AATG TTTTATTTATTTCTT NAMH_0689 614037 - 612790 - | putative chloride channel protein NAMH_0690 614444 - 614049 - | hypothetical protein dtd 614871 - 614446 - | D-tyrosyl-tRNA(Tyr) deacylase hemH 615742 - 614846 - | ferrochelatase NAMH_0693 616758 - 615742 - | riboflavin biosynthesis protein ribAB NAMH_0694 617781 - 616771 - | competence/damage-inducible domain protein TERM 524 616859 - 616889 + g 75 -4.9 -4.96848 | gap 1 ATGTAGTTTCTATCA CCCTTAAAAT-GAA ACTC TTCGACTTTAAGGG TTTTTCTATCCGCCA NAMH_0695 617831 - 618631 + | polyphosphate kinase 2 TERM 525 620636 - 620625 - gf 76 -4.4 -5.03145 | opp_overlap 620616 GAAGTTTCTAAAAAA TTCG GAAC CGAA ATTTTAAGATTATGG ileS 618759 - 621494 + | isoleucyl-tRNA synthetase NAMH_0697 621463 - 621594 + | hypothetical Membrane Spanning Protein TERM 526 622312 - 622297 - g 71 -5.4 -4.46854 | ACAGAAAACTTAAAA TTGCCG TAAT CGACAA CTATATCGATGAGGC NAMH_0698 621594 - 622949 + | glutamyl-tRNA(Gln) amidotransferase subunit A guaB 622946 - 624394 + | inosine-5'-monophosphate dehydrogenase TERM 527 625010 - 624994 - g 74 -2.3 -5.40072 | GTGCGTGCAAAAAAA TTAATCT TAA AGATTTA AAAGTTGAACAGTTA TERM 528 625370 - 625360 - g 86 -5.4 -5.59564 | ATAAATTCAAAAAAA TGCA CCC TGCA TATAAAAACTTAACA NAMH_0700 624516 - 625469 + | immunogenic protein TERM 529 625477 - 625489 + F 75 -4.8 -5.06414 | TTCTATAATTCTTCT TCCC TTTTT GGGA TTTTTATTAAAAAAA TERM 530 625710 - 625727 + G 75 -7 -4.10781 | overlap 625700 CTCTTATTGCATTCA GCTGGT CGATTT ACCAGC TTTATGTAAGTTATT TERM 531 626409 - 626396 - g 73 -3.7 -5.14563 | CCTCTTATGAAAAAA GCTGG ATTT CCTGC GGAAAAAGCGGCTGC NAMH_0701 625526 - 627643 + | transporter NAMH_0702 627723 - 627959 + | hypothetical protein NAMH_0703 627956 - 628966 + | hypothetical protein NAMH_0704 628981 - 630315 + | Orn/DAP/Arg decarboxylase, family 2 NAMH_0705 630318 - 632342 + | putative urea transporter TERM 532 632474 - 632461 - g 74 -6.7 -4.30719 | opp_overlap 632461 CCTGTTTATAATAAA TACCC AAAC GGGTA TACGTTAAATTTGAG NAMH_0706 632317 - 632907 + | putative TPR domain protein NAMH_0707 632904 - 633494 + | response regulator NAMH_0709 633497 - 634381 + | hypothetical protein NAMH_0708 635274 - 634378 - | methylenetetrahydrofolate reductase NAMH_0710 635335 - 635670 + | molybdenum-pterin-binding protein NAMH_0711 635699 - 636262 + | para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II NAMH_0712 636259 - 637413 + | putative integral membrane protein TERM 533 637811 - 637791 - g 77 -4.7 -5.1675 | overlap 637806 GGATTGATGAAAAAA GAAGCGGTA AAG TAACACTTC TTAGCGGACAAAGCG NAMH_0713 637499 - 638833 + | ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) TERM 534 639258 - 639270 + GF 73 -7.7 -3.60098 | AACAGTTGGTGCTAT TGCTC CGG GAGCA TTTAAAGTAGCAAAT NAMH_0714 638833 - 640680 + | ATP-citrate synthase (ATP-citrate (pro-S-)-lyase) TERM 535 640666 - 640692 + GF 74 -6.7 -4.17023 | opp_overlap 640666 TACCAAGTTGACAAA GCAGAAGAA CTATAATTT TTCTTCTGC TTTTACAATGATTGA NAMH_0715 640640 - 641371 + | N-terminal methylation TERM 536 642226 - 642211 - f 77 -9 -3.32819 | CACAGAGGGGGATAA CACACC GAAA GGTGTG CTAATACCGCATACA TERM 537 643498 - 643478 - f 70 -8.1 -3.07895 | overlap 643476 GGTATCCCTAAGATA GGGGCCGCC TAC GGTGGACCC GGCGACTGGGGTGAA TERM 538 643547 - 643528 - f 72 -9.2 -2.65808 | opp_overlap 643531 643534, overlap 643525 643540 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 539 643886 - 643846 - f 74 -7 -4.29928 | opp_overlap 643846 643860, overlap 643853 AATGAAGAGTGAAAA GTGAAAAGTTAAGAGTGT GAGAG ACACTTTTAGCTTTACAC TTTTAGAGAGTGTAA TERM 540 643846 - 643886 + F 100 -11.4 -4.10657 | opp_overlap 643846 643853, overlap 643860 AATGAAGAGTGAAAA GTGAAAAGTTAAGAGTGT GAGAG ACACTTTTAGCTTTACAC TTTTAGAGAGTGTAA TERM 541 644437 - 644425 - f 70 -6.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGTGA GGGG AGTGAAATAGAACCT TERM 542 645546 - 645536 - f 78 -6.8 -4.36914 | opp_overlap 645536 645535 GTCGTGCCGAGAAAA GCCT CTA AGGC GTTTGAGCTATTAGT TERM 543 646193 - 646169 - f 87 -11.4 -3.14344 | opp_overlap 646183 TATCCTGCCTACTAA CCCGCAGCAG TAATC CTGCTGGGGG ACAGTGCCTGGCGGG TERM 544 647533 - 647549 + G 71 -6.7 -4.10437 | TTTATTATCAATTTC TTACTTT ACA AAAGTAA TTCTTTGCTTAGTGA NAMH_0723 647290 - 648483 + | Ste24 endopeptidase NAMH_0724 648480 - 649139 + | alcohol dehydrogenase TERM 545 649839 - 649816 - g 80 -2.6 -5.68023 | GTATAACCAAAAAAA TCTTTTAA GTGAATTT TTAAAAGA CAAGGCTGAAAGTTT NAMH_0726 649136 - 649909 + | modification methylase, HemK family NAMH_0725 651038 - 649899 - | related to fosmidomycin resistance protein TERM 546 650028 - 650015 - G 72 -8.1 -3.52307 | opp_overlap 650012 CAAGATAGACTATAA CGGAG CTTA CTCCG AAATTTATTCCCATA NAMH_0727 651307 - 651035 - | hypothetical protein NAMH_0728 651892 - 651317 - | hypothetical protein TERM 547 652161 - 652145 - g 73 -4.5 -4.86216 | ACAAAAAAGAATAAA TCAATTC CCG AAATTGA CGTTAAAAACCCTCT TERM 548 652278 - 652268 - g 77 -3.2 -5.54907 | CTTATAAAACAAAAA GGAA CGC CTCC GAATGTAAAAAGGTA TERM 549 652556 - 652543 - g 84 -8.1 -4.59773 | overlap 652545 CCTCACGCTTAAAAA CGTCG ACTG CGACG AGATTGTAAATTATC TERM 550 653607 - 653583 - g 73 -3.7 -5.03409 | overlap 653584 TCATAAAAAAAACAA CCAAACTTTTT ATT AAAAAACTTGA GGAGATTGAAAGGGA TERM 551 653906 - 653917 + G 76 -3.6 -5.28176 | ATTGCGGTATTTTTG GCTC AGGC GGGC TTTTTTGTGCCTGCA TERM 552 654006 - 654026 + G 75 -9.8 -2.75481 | ATTTAAGCAAGGGGC TCTCAACC TTTGC GGTTGAGA TGCTTGAGCTTAAAA TERM 553 654114 - 654140 + G 73 -8.6 -3.33261 | opp_overlap 654102 GAACTGAAACCACTT CAGCCCTTGCCA TTG TGGCGAGTGCCG TTATCAAACTTGCAA NAMH_0730 651941 - 654694 + | MutS-related protein NAMH_0729 655305 - 654691 - | hypothetical protein NAMH_0731 655429 - 656457 + | HemV-3 iron (III) ABC transporter, ATP-binding protein NAMH_0732 656442 - 657422 + | ABC-type iron(III)-siderophore transport system, permease component NAMH_0733 657424 - 658179 + | iron ABC transporter ATPase subunit TERM 554 658254 - 658278 + F 76 -8.7 -3.53933 | opp_overlap 658250 658261 658262, overlap 658249 658252 658258 658261 TTTTAAAAAGTTTCT TCAAGAAGGAA GTT TTCCTTCTTAA TTCTCATATTAGTGT TERM 555 658258 - 658274 + F 80 -9.5 -3.49851 | opp_overlap 658250 658261 658262, overlap 658249 658252 658254 658261 AAAAAGTTTCTTCAA GAAGGAA GTT TTCCTTC TTAATTCTCATATTA TERM 556 658814 - 658795 - f 72 -3.7 -5.21506 | opp_overlap 658789 658801, overlap 658789 ATAAGAATATAAAAA TTTTAAG TTTTTT CTTAAAA AACTGAGTTACAATT TERM 557 658920 - 658908 - f 71 -9.1 -2.52464 | opp_overlap 658907 658906 TTGTGCGGTAACGTA TGCCG TAG CGGCA CCATTTTGGTATTAC TERM 558 659786 - 659821 + F 79 -5 -5.29742 | gap 1 TCTGATGGTTAAAAG GAAAAAAGC-GTGAGAA TAT TTTTTATTGCTTTTTTC TTTCTTTTTTTATAT TERM 559 659857 - 659845 - g 77 -4.9 -5.1287 | opp_overlap 659853 TTTATATTTAAAAAA TATTG AAG CAATA CTCCTTGGAGTTTTG TERM 560 659923 - 659935 + G 83 -4.9 -5.41941 | AAGGAGCAAAAGGGT TATTG TTT CAATA TTTTTATTTAATTTA NAMH_0735 659795 - 660331 + | hypothetical protein NAMH_0736 660358 - 661119 + | cobalt import ATP-binding protein CbiO 2 TERM 561 661943 - 661931 - g 72 -4.7 -4.78029 | GCAAGAAAACTAAAA CCTGG AGT CCCGG TAGTACTTCTAAACA hypB 661331 - 662041 + | hydrogenase accessory protein HypB hypC 662074 - 662388 + | hydrogenase assembly chaperone HypC/HupF hypD 662406 - 663524 + | hydrogenase expression/formation protein HypD hypE 663569 - 664546 + | hydrogenase expression/formation protein HypE TERM 562 664704 - 664689 - g 74 -3.2 -5.31456 | opp_overlap 664691, overlap 664691 GGAATTGATAAAAAA TGGCGT CAAA ACGCTA TTAAAAAGACTTTGG TERM 563 664833 - 664822 - g 86 -5.8 -5.44837 | AAAAAAATATAAAAA CGCA TATC TGCG GACTTGATCCCAGCA NAMH_0741 664593 - 665294 + | ubiquinone/menaquinone biosynthesis methyltransferase UbiE TERM 564 665286 - 665315 + T 78 -6.6 -4.46155 | opp_overlap 665291, overlap 665291 GGAGTGTTTATATTT AAAAAGTAAAGG AAGTTC CCTTTACTTTTC TTTTATAAGTGTCTG TERM 565 665291 - 665310 + T 84 -6.5 -5.19275 | opp_overlap 665291, overlap 665286 GTTTATATTTAAAAA GTAAAGG AAGTTC CCTTTAC TTTTCTTTTATAAGT TERM 566 665310 - 665291 - T 80 -7.2 -4.70659 | opp_overlap 665286 665291 GTTTATATTTAAAAA GTAAAGGA AGTT CCCTTTAC TTTTCTTTTATAAGT TERM 567 665434 - 665415 - T 93 -10 -4.45664 | TGAATGCAATTAAAA GGAGGAGA TTAT CCTCCTCC TACGAAATTAAGAGC thiS 665623 - 665423 - | thiamine biosynthesis protein ThiS glyS 667605 - 665632 - | glycyl-tRNA synthetase, beta subunit TERM 568 668257 - 668247 - g 95 -2.6 -6.17268 | TGACAATAAAAAAAA TTAT TAT ATAA ACTTTTCACACAGTG TERM 569 668823 - 668790 - g 71 -6.3 -4.14615 | gap 1, opp_overlap 668795 ACAAAACATTATAAA TCTTTTTATC-GAAGA TAA TATTCAGATAAAAAGA AATCATATTGTAACA TERM 570 669276 - 669286 + G 74 -5.4 -4.69053 | opp_overlap 669276 TAATTTGAACAGAAG TCAC AGA GTGA TTTTATTGAATACTC NAMH_0744 667693 - 669585 + | hypothetical protein TERM 571 669642 - 669673 + G 76 -6.8 -4.49556 | gap 1, opp_overlap 669641 669651 TATGCACAAGATACC GAAGTTAAACTGTTT ACA AAACTGTTTA-CTTC TTTGTTTAATAAAAA NAMH_0745 669600 - 669971 + | hypothetical protein TERM 572 671108 - 671097 - g 79 -4.4 -5.27769 | AGAAAAAAGTAAAAA CGTT TCCA AACG AATTAAAACAGGTTT NAMH_0746 669968 - 671446 + | multi-sensor signal transduction histidine kinase TERM 573 671622 - 671603 - g 70 -3.6 -4.84529 | opp_overlap 671606 GGAGAAATTCAAAAA CAACAAGA TCGA CCTTGTTA TAACTGATATAAATA TERM 574 672343 - 672307 - g 95 -13.3 -3.66666 | opp_overlap 672300 672317, overlap 672293 672299 TTGAAAACTTTCAAA GTTTCAGGAACTTTTTC GGT GAAAAAATTGCTGAAAC AATTGAACATAAATT TERM 575 672644 - 672626 - g 71 -3.2 -5.17786 | GAATAAAATTAAAAA TAATAAAG ATT CTTTTTTA ATTGCGGATGGTTTA TERM 576 673032 - 673022 - g 70 -4 -4.87291 | GATGTTAAGTAAAAA CAAA GAA TTTG CCAAATATGTAACAT NAMH_0747 671439 - 673412 + | diguanylate cyclase/phosphodiesterase NAMH_0748 673421 - 673825 + | 4-hydroxybenzoyl-CoA thioesterase domain protein NAMH_0749 674327 - 673827 - | hydrogenase subunit NAMH_0750 675701 - 674337 - | hydrogenase-3, subunit E TERM 577 674560 - 674570 + g 86 -2.6 -5.8096 | opp_overlap 674560 CCGTCTTTAAATTCA TTAA GCA TTAA TTTTTCTTTTTTATC NAMH_0751 677077 - 675698 - | NADH-ubiquinone/plastoquinone (complex i), various chains domain protein NAMH_0752 677665 - 677078 - | hypothetical protein NAMH_0753 678587 - 677667 - | formate hydrogenlyase subunit 4 NAMH_0754 680443 - 678584 - | hydrogenase-4 component B TERM 578 679101 - 679087 - G 74 -5.6 -4.67038 | opp_overlap 679088 679089, overlap 679089 CTCCTAAAATTAAAA GAGGGG CAA CCGCTC CGTTTGAATTTAGTG TERM 579 680188 - 680168 - G 82 -5.5 -5.28778 | ATGAGTCATAAAAAA GTAAAATCT TGC AGCTTTTAC CGCTTCGTCAGTCGG NAMH_0755 681440 - 680553 - | HpcH/HpaI aldolase TERM 580 681006 - 680982 - G 72 -2.7 -5.21709 | opp_overlap 680982 TTTTAGATTAAAAAA CGCCTCTTTGG TCT CGATAGACGCG TGTATTTCTTTATCG NAMH_0756 681835 - 681440 - | hypothetical protein NAMH_0757 681897 - 682751 + | FolD bifunctional protein lepB 682748 - 683587 + | signal peptidase I NAMH_0760 683597 - 684259 + | peptidase M50 TERM 581 684243 - 684275 + T 95 -9.1 -5.04601 | opp_overlap 684242 CGTATGTGTTAATAG GCTGGCTTTTGGGTT AAG AACCCTTAAACCAGC TTTTTACTTTATCAA dnaJ 685350 - 684256 - | chaperone protein DnaJ TERM 582 684370 - 684381 + g 76 -4.4 -5.0538 | AAGAAGTTCTCTTTG CTCA TCTG TGAG TTTTTTAGGGTAGAC TERM 583 684601 - 684614 + g 73 -3.9 -5.07971 | GATTAAATTGTTTCC TTTTC TTTT GAAAA TTTTTGATTCTTTTA TERM 584 685199 - 685211 + g 76 -2.7 -5.42862 | TCGCTTAAAACCTGG TAAGC CTC GTTTA TTTTTTTAAACATCT TERM 585 687005 - 686995 - g 76 -2.6 -5.41143 | TAGCGGTTAAAAAAA TAAA ACC TTTA GCGATTACCGACTGT TERM 586 687420 - 687433 + G 79 -9.5 -3.35996 | overlap 687431 ATCTCAACGGGCGGT GCGGC GATA GCCGC TTATAAATGGGCGTG TERM 587 687575 - 687555 - g 73 -8.3 -3.70039 | AAACCTGAAAATGAA GCTGAGTTT GAA AAACTCTGC AATGAAAAAGGTATC TERM 588 687646 - 687634 - g 89 -6.3 -5.67711 | GAAATAAAATAAAAA TCAAC GAA GTTGA AGTTCCACTTGATAA purL 685524 - 687719 + | phosphoribosylformylglycinamidine synthase II NAMH_0761 688587 - 687712 - | transcriptional regulator NAMH_0763 688685 - 689443 + | inner membrane protein YeiH NAMH_0764 689524 - 689703 + | inner membrane protein YeiH NAMH_0765 691108 - 689708 - | RNA-metabolising metallo-beta-lactamase TERM 589 690386 - 690397 + g 76 -4.4 -5.20154 | GCCGTTAAGCAGAGT GTCA ATGA TGAC TTTTTTGAATTCTCT TERM 590 690672 - 690684 + g 83 -4.9 -5.4477 | TTATTATATTCTATT TTAAC TCT GTTAA TTTTTTTGAAAATTT ppsA 693547 - 691154 - | phosphoenolpyruvate synthase TERM 591 691706 - 691718 + g 74 -5.5 -4.67982 | overlap 691707 TGCGGCTCCCCTGAA TCCGA TCA TCGGG TTTTCTTCAATCGGC TERM 592 692801 - 692812 + g 76 -3.6 -5.28176 | TTTGCGTTTTAGTAC GGCT TTGT GGCC TTTTTTGTACGTAGG NAMH_0767 694822 - 693608 - | hypothetical protein TERM 593 694013 - 694002 - G 77 -3 -5.49579 | TTATAAAAAATAAAA GATA AAAT TATC ATGATTCCTGCAAAT NAMH_0768 697485 - 694819 - | plasma-membrane proton-efflux P-type ATPase gidA 698933 - 697641 - | glucose inhibited division protein A TERM 594 698469 - 698491 + g 74 -2.1 -5.44721 | gap 1, opp_overlap 698472, overlap 698472 CACGTGTTTGAAATT TAA-CGCTTC ATCG GAAGTGATTA TTTTTTTAGAATCAT TERM 595 698767 - 698784 + g 80 -6.9 -4.57073 | CTTTCAATTACGCTC CCGGCTC TGTG GAGCAGG TTTTTGGAAGGAATG NAMH_0770 700131 - 698926 - | dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex NAMH_0771 701095 - 700121 - | pyruvate dehydrogenase E1 component beta subunit NAMH_0772 702053 - 701082 - | pyruvate dehydrogenase E1 component, alpha subunit TERM 596 701782 - 701794 + g 77 -3.3 -5.40072 | GAACCGCCTTTTCCT CGGCT TAC ACCCG TTTTTTTGCCAAAAA TERM 597 701954 - 701967 + g 72 -8.1 -3.37761 | opp_overlap 701953 701954 CAAGATGTAAAAACC CGGCA ATGT TGCCG TTCATATATTCACGT NAMH_0773 702378 - 702046 - | DNA-binding protein NAMH_0774 704357 - 702453 - | CoA binding domain protein TERM 598 703553 - 703568 + g 80 -2.6 -5.72207 | TGTCAAGGGTGTAAA CTTTTT TTGA GAAAAG TTTTTTTAATTTCGG TERM 599 703883 - 703901 + g 71 -7.4 -3.68674 | overlap 703882 TTAAATCATATTCCT TTCCTCTG AAA CGGGGGAA TATTTTGGAGATTTT TERM 600 703965 - 703979 + g 76 -3.6 -5.26155 | ATCAGCGTACGTGTC GATATA GCA TATGTC TTTTTCTATTTCTAT NAMH_0775 705321 - 704359 - | 6-phosphofructokinase TERM 601 704555 - 704565 + g 72 -8.2 -3.45231 | opp_overlap 704550, overlap 704553 CTTTCAAACACGGTA GGCG AAC CGCC TCTTTGGATGTGTCC TERM 602 705157 - 705171 + g 95 -2.8 -6.20267 | overlap 705156 TATTATGCCTGAGAC GTCTTT GAA AGAGGC TTTTTTTATTTTTCC NAMH_0776 706146 - 705331 - | lipoyl synthase TERM 603 705379 - 705409 + gr 100 -11.2 -4.64657 | overlap 705378 AACCGCTCCGCTGAC CACGGCTTCAAAGC CGA GATTTAAAGCCGTG TTTTTAAGAATTTCA TERM 604 705959 - 705973 + gr 74 -6.4 -4.33417 | overlap 705960 TTGCCGCTCTTTACG TTGCAG AAT CTGCAG TTTCTTGTGCATACG NAMH_0777 706705 - 706115 - | putative lipoyltransferase TERM 605 706690 - 706704 + gH 83 -5.8 -5.10601 | TAAGTCCTAAGTCTT TGAAAA CGA TTTTCA TTTTTATCCTTTTAT purH 706756 - 708270 + | bifunctional purine biosynthesis protein PurH TERM 606 708295 - 708284 - f 70 -7.2 -3.57816 | overlap 708280 AACACTAATAATTAA GCCC TTCC GGGC TGGAGACAGTATGAA TERM 607 708573 - 708595 + G 73 -8.4 -3.64984 | overlap 708585 CCTCTTTTTTATTTT GCCACGTCCT GGC AGCATGTGGC TGTTTTCAGAAGTCT TERM 608 709238 - 709257 + G 86 -2.8 -5.92399 | opp_overlap 709238 709240, overlap 709240 AAAAAAAGCTTACAA TACCGCAA CCGT TTACGGTG TTTTTTATTTTATTG NAMH_0779 708306 - 709415 + | putative permeases of the major facilitator superfamily NAMH_0780 709396 - 709827 + | hypothetical protein TERM 609 709913 - 709903 - g 84 -6.8 -5.13722 | opp_overlap 709902 TCGATGAAAATAAAA GTCC TAA GGAC AAATTTTTTGAGATT NAMH_0781 709878 - 710141 + | hypothetical protein TERM 610 710136 - 710152 + G 74 -2.3 -5.54264 | opp_overlap 710139, overlap 710139 ATTTTAACTAAAAAT GAATAAA TTT TTTATAC TTTTTTTCCCTCTTT NAMH_0782 710134 - 710517 + | hypothetical protein NAMH_0784 710514 - 711377 + | prenyl transferase NAMH_0783 712036 - 711374 - | ATPase, ParA family TERM 611 711857 - 711879 + g 80 -2.8 -5.63857 | TTTTATGATTTTTTC GATAGGTTTT TGG AAAATATATC TTTTTTTCGGTTTTT TERM 612 712510 - 712538 + G 79 -5.2 -5.18355 | opp_overlap 712509 712519, overlap 712504 GCTTTTTGACAGAAG CTGGTACAACCG CGCAA TGGTTGAGCCGG TTTTTGGTTTTTGCA NAMH_0785 712100 - 713005 + | polyphosphate kinase 2 TERM 613 713605 - 713592 - g 71 -6.7 -4.13561 | opp_overlap 713591, overlap 713596 TTTGTTGAAAAAATA GCAAG CGCG CTTGC ACTTATGGATGTAAA TERM 614 713873 - 713861 - g 70 -6.9 -3.78775 | opp_overlap 713861, overlap 713862 CGCCGTACTATTAAA CGCCG GGG CGGCA CTGTTTGTTGACGGT trpD 713016 - 713999 + | anthranilate phosphoribosyltransferase NAMH_0787 714017 - 714418 + | hypothetical protein TERM 615 715112 - 715096 - g 73 -3.7 -5.15969 | opp_overlap 715096 CCTGAAGTTAAAAAA TCTTATC TTG GAGAAGA TTTCAAGCTATGAAA NAMH_0788 714406 - 715125 + | ABC transporter, ATP-binding protein TERM 616 716187 - 716171 - g 73 -3.7 -5.10877 | AGAAGAAATCAAAAA CCTCATT AAA AACGAAG ATAAAAACAAACCTC rpoN 715122 - 716354 + | RNA polymerase sigma-54 factor NAMH_0789 716770 - 716351 - | hypothetical protein TERM 617 716631 - 716647 + g 71 -5.2 -4.62561 | GCTTTGTCTTTGTTT CTAAAC TGACT GTTTAG TTCTTTTATTTCTTC TERM 618 716995 - 716968 - g 72 -8.4 -3.39449 | gap 1, opp_overlap 716967 716968 CGGTAGTAATATTAA GCGGAGGT-ATGG ATT CCACAACCGCCGC ATTTATAGCGAAAAG NAMH_0791 716943 - 717611 + | ExsB protein argB 717752 - 718594 + | acetylglutamate kinase TERM 619 718952 - 718963 + G 70 -7.2 -3.76125 | overlap 718950 GGGGACTCACCATGA CGGC AACC GCCG TTTCGCTTACAATGG TERM 620 719428 - 719417 - g 71 -3 -5.11937 | AAGAAGTTGAAAAAA TAAC ATCC GTTA TGGCCTACACTGTGT NAMH_0793 718594 - 719799 + | putative proton/sodium antiporter TERM 621 720088 - 720072 - g 70 -7.3 -3.74519 | AATATTGTTATGAAA GATCCTG TAA CAGAATC CGTTGTAAATTTTAA NAMH_0794 719835 - 720197 + | hypothetical protein TERM 622 720305 - 720295 - g 73 -8.2 -3.65786 | opp_overlap 720295 AAAGAACAATTACAA GCCG CCA CGGC GCCTCTTGGACACAA NAMH_0795 720259 - 722286 + | ATP-dependent helicase TERM 623 722499 - 722518 + G 73 -4.2 -4.91109 | AGGGGCGGTGCCATT GCCGTACA GCTG TTTGCGGC TTTTTATGCTCAGGG NAMH_0796 722325 - 723533 + | major facilitator superfamily MFS_1 NAMH_0798 723533 - 724114 + | DedA NAMH_0797 724451 - 724104 - | hypothetical protein NAMH_0799 724625 - 725671 + | C4-dicarboxylate transporter/malic acid transport protein TERM 624 725679 - 725695 + T 74 -8.7 -3.33037 | opp_overlap 725679, overlap 725682 CTGAATAATTTAAAA GAAGGCT TAA GGCCTTC TTGATAATTTAAAGT TERM 625 725695 - 725679 - T 85 -8 -4.36127 | opp_overlap 725679 725682 CTGAATAATTTAAAA GAAGGC TTAAG GCCTTC TTGATAATTTAAAGT NAMH_0800 726268 - 725807 - | pugilistDominant TERM 626 726237 - 726220 - GT 72 -2.7 -5.22104 | TAAAAAAGAATAAAA GGAAG GAATTAAT CTTCC CATCCTCCTCTAAAA NAMH_0801 726812 - 726228 - | iron-molybdenum cofactor-binding protein NAMH_0802 727102 - 726833 - | DNA-binding protein TERM 627 727166 - 727108 - H 70 -7.1 -3.64703 | gap 1 TTCTTGGCATTTAAA CCTCCTTGAACATATGCTCAATAAAATT ATAC AACTTTTTTGAACATATG-TCAAGATAG GGTATGTAATTTTTT TERM 628 727538 - 727515 - g 100 -7 -5.90981 | opp_overlap 727506 727515 TGATACTAAAAAAAA TTTTTTTTAT ATTG ATAAAAAAAA TAATATTAAAATCAT TERM 629 727793 - 727805 + G 75 -4.9 -5.02074 | overlap 727790 AGAGTGTTAATTCTT TACTT TTA AAGTA TTTTTTAACAAATAA TERM 630 727840 - 727823 - g 76 -4.3 -5.09762 | TTTTAACAAATAAAA TAAAAAA TTAT TTTTTTA ATCCAAATATTTTTT NAMH_0803 727222 - 728892 + | hypothetical protein TERM 631 729512 - 729474 - g 80 -2.6 -5.74122 | opp_overlap 729480 GAGGATATAAAAAAA TATTCTTTTTTCGATGAA AAA TTCATAGAAATAGAAATA GAGGAAAAAACTTCA NAMH_0805 728892 - 729788 + | hypothetical protein NAMH_0804 730527 - 729781 - | NAD-dependent deacetylase TERM 632 730237 - 730247 + g 91 -5.4 -5.93252 | opp_overlap 730237 GTTTTGAGTTATAAC TGCT TCA AGCA TTTTTTCTTTTTCAA TERM 633 730316 - 730331 + g 75 -4.8 -5.00884 | TTTTGCATATAATCG TAAAAG ATCT CTTTTA TTTTTTCCCAAGCGT NAMH_0806 731644 - 730643 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase proA 731865 - 733100 + | gamma-glutamyl phosphate reductase NAMH_0808 733111 - 734019 + | putative phosphatase ilvB 734116 - 735813 + | acetolactate synthase, large subunit, biosynthetic type TERM 634 735858 - 735842 - g 85 -8.7 -4.1964 | GGTAATAGTGGAAAA CGAACAC GGT GTGCTCG CAAGAATCGTTAATA ilvN 735810 - 736271 + | acetolactate synthase, small subunit TERM 635 736256 - 736273 + F 79 -7.1 -4.43571 | overlap 736249 736248 AAGAAGCGGAGCGAG TGTTATC GAAA GATAACA TTTTGCTCATTTTCT TERM 636 737309 - 737293 - g 70 -8.1 -3.30474 | TGGGAGAAGGATCAA TACTTGT TTC ACAAGTA GGACTTGCCGGAAGT lpxD 736557 - 737531 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 637 737921 - 737911 - g 84 -8.2 -4.63932 | overlap 737896 CACTCTTCAATAAAA GCGC CTT GCGC ATATGCAAAAACTTT NAMH_0812 737596 - 738768 + | cysteine desulfurase NAMH_0813 738844 - 739809 + | NifU family protein NAMH_0815 739895 - 741805 + | putative diguanylate cyclase/phosphodiesterase NAMH_0814 743348 - 741798 - | succinate dehydrogenase flavoprotein subunit TERM 638 743621 - 743611 - g 79 -5.4 -5.1925 | opp_overlap 743611 TGACAATTTAAAAAA CGAA GCA TTCG CTTTGCCTGTTGTAT TERM 639 743947 - 743927 - g 70 -4.1 -4.67168 | overlap 743929 AAAAATTCTCAAAAA TTTAAAGAA ATG TTCTTTACA ACATATCCTAAATTC TERM 640 743991 - 743980 - g 71 -3 -5.06735 | opp_overlap 743980 TATAAATGACAAAAA TATG ATTG CATA TTATAAAAGTTTGAT NAMH_0816 743393 - 744016 + | hypothetical protein NAMH_0817 744018 - 745400 + | glycolate oxidase subunit glcd xth 745458 - 746210 + | exodeoxyribonuclease III NAMH_0820 746218 - 746802 + | DedA family protein NAMH_0819 747832 - 746792 - | sensory box/ggdef domain protein NAMH_0821 748116 - 747835 - | stress responsive A/B Barrel Domain superfamily TERM 641 748069 - 748088 + g 75 -7.2 -4.10161 | opp_overlap 748066 748065, overlap 748065 TTCTTTAAAAATCTC CAAAGGAG CGTT CTCTTTTG TTTTAAACAGTACTA NAMH_0822 749279 - 748113 - | aspartate aminotransferase TERM 642 749379 - 749365 - g 93 -5.8 -5.81622 | ATAAAAGGAAAAAAA TGAAAA CAC TTTTCA ATACAATAAACGATT NAMH_0823 749364 - 750272 + | PvdS TERM 643 750709 - 750693 - g 77 -3 -5.46629 | AATATGTTAAAAAAA CTTCCT TTAAT AAGAAG TGAAGTAGATAATCT NAMH_0824 750315 - 752672 + | methyl-accepting chemotaxis sensory transducer NAMH_0825 753378 - 752677 - | serine acetyltransferase tmk 753940 - 753356 - | thymidylate kinase TERM 644 753783 - 753761 - G 82 -7.9 -4.56597 | CCTGTCGGCTAAAAA CAAAAAAAG TTCAG CTTTTTTTG AAATATCGTCATTAA coaD 754404 - 753940 - | pantetheine-phosphate adenylyltransferase TERM 645 754243 - 754253 + g 77 -5.4 -5.02074 | GGTTGCTTTTTTCAT GAGT TCT ACTC TTTTTTCAAGGCTAA NAMH_0828 754919 - 754404 - | flavoprotein TERM 646 754664 - 754681 + g 71 -5.5 -4.57837 | GAGTGATTAAGTTGT CCGCTAT TCCC AAAGCGG TTTTTGCAAGAGTAT NAMH_0829 755531 - 754932 - | flagella basal body P-ring formation protein FlgA lon 757868 - 755544 - | ATP-dependent protease La TERM 647 755660 - 755674 + g 76 -4.4 -5.07011 | AGTTTTTTTGAGGTA TTAAAA CTT TTTTAA TTTTTGCTTTATATG TERM 648 757748 - 757761 + g 76 -4.5 -5.0916 | TTATAGCTTTTTGAA CGGCA ATTA TGTCG TTTTTATCTTCAAGG NAMH_0831 758504 - 757878 - | putative lipoprotein TERM 649 757964 - 757976 + g 74 -3.4 -5.38951 | overlap 757955 AAAGTTCCGAAGCTT TTGG TTTAT CCAA TTTTTTATATAGGTT TERM 650 758297 - 758285 - G 83 -4.9 -5.41143 | opp_overlap 758285 GATGTGCTAAAAAAA GATTT AAT AAATC GGTTTTAATATATAT valS 761073 - 758497 - | valyl-tRNA synthetase TERM 651 758524 - 758538 + g 82 -4.3 -5.54338 | TTTCCTTAATTCATC TTCCA CTTTT TGGAA TTTTTCTTTTAATTC TERM 652 761615 - 761590 - g 72 -4.7 -4.66953 | gap 1, opp_overlap 761601, overlap 761592 GTAATACTTGAAAAA TACGGTTACGGT TTG ACCG-AACCGCT TAAAAATTTTATAAA TERM 653 761613 - 761592 - g 85 -9.5 -3.9442 | gap 1, opp_overlap 761601, overlap 761590 AATACTTGAAAAATA CGGTTACGGT TTG ACCG-AACCG CTTAAAAATTTTATA NAMH_0833 761266 - 761643 + | hypothetical protein proC 761640 - 762377 + | pyrroline-5-carboxylate reductase NAMH_0835 762355 - 763029 + | prokaryotic N-terminal methylation motif domain protein NAMH_0836 763026 - 764027 + | prepilin-type N-terminal cleavage/methylation domain protein NAMH_0837 764024 - 764461 + | hypothetical protein TERM 654 764482 - 764506 + F 76 -8.7 -3.53012 | opp_overlap 764476 764485, overlap 764485 764489 AGGTTATAATTTAGA TAATAAACGGT TAA GCCGTTTGTTA TTTAAAAAGAAAGGA TERM 655 764796 - 764786 - g 79 -5.4 -5.06735 | GACAAATTAGAAAAA CTTC TTA GAAG ATACCATGATAAAAT NAMH_0838 764531 - 765031 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 656 765122 - 765109 - g 70 -2.4 -5.25772 | AAATCAGAAGAAAAA GAAC TCACGG GTTC AGAGCAAGACTAAAG rpmH 765069 - 765203 + | ribosomal protein L34 NAMH_0840 765371 - 765490 + | hypothetical protein NAMH_0841 765441 - 765785 + | protein of unknown function DUF37 NAMH_0842 765775 - 767316 + | inner membrane protein OxaA NAMH_0843 767313 - 767963 + | hypothetical protein trmE 767932 - 769260 + | tRNA modification GTPase TrmE NAMH_0846 769278 - 769670 + | hypothetical protein NAMH_0845 772682 - 769662 - | NAD-glutamate dehydrogenase family protein TERM 657 769715 - 769727 + g 95 -3.4 -6.32976 | GAGAAAGAAGGGTTA GAGA TTTTT TCTC TTTTTTTATTTTTTT TERM 658 772159 - 772190 + g 84 -6 -5.28942 | opp_overlap 772173 ATTTCTTTTTCTATT TTTTCTTCAAGGGA CAAA TCTTTTGTAGAAAA TTTTTGTTTAAAATA TERM 659 772362 - 772378 + g 70 -3.7 -4.86731 | opp_overlap 772356 772362, overlap 772364 AGCCATATAGTAAAG TTTACAC AGG GTGTATA TTTTATTTAACAGGG TERM 660 772404 - 772417 + g 72 -2.5 -5.36314 | overlap 772409 CAGGGCTTTTTCAAG TATTT CTAA AAATA TTTTTTCGTGTTTTA NAMH_0847 773614 - 772823 - | protein of unknown function DUF52 NAMH_0848 774629 - 773628 - | radical SAM NAMH_0849 775702 - 774716 - | putative dihydroorotase TERM 661 775708 - 775749 + H 80 -6.1 -4.90455 | opp_overlap 775734 CTATAGTCATTATCA GCCTTTTTTATTATAATTT TACT AAATTTTTAAAAAAAAGGC TTTTTATGGCTCTGT NAMH_0850 775755 - 775937 + | hypothetical protein NAMH_0851 775934 - 776413 + | hypothetical protein purD 776489 - 777742 + | phosphoribosylamine--glycine ligase NAMH_0853 777772 - 778218 + | RDD protein TERM 662 778759 - 778744 - g 71 -9 -3.10945 | opp_overlap 778744, overlap 778734 778743 TAAAACAAGAAGAAG CGGTCT TCTT AGACCG TATGTAGGATTTTCT TERM 663 779867 - 779877 + G 71 -5.4 -4.54449 | opp_overlap 779867 AGTTATAATAATGAA CTGT TTT ACAG TTTTATATCCCATGT NAMH_0854 778205 - 780193 + | putative periplasmic protein NAMH_0855 780190 - 781593 + | mce related protein TERM 664 781679 - 781665 - g 79 -3.6 -5.5353 | GACATTAATAAAAAA TACAAA AAA CTTGTA AAACAGACACATCCG NAMH_0856 781617 - 781844 + | dnajb11 protein NAMH_0857 781846 - 782439 + | hypothetical protein TERM 665 782829 - 782839 + G 73 -8.2 -3.69083 | opp_overlap 782815 782829 782828 ACAGCTGCAATGAAC GCGG CAG CCGC TTGTATGTATCTTAG NAMH_0858 782439 - 783794 + | polyribonucleotide nucleotidyltransferase TERM 666 784718 - 784695 - g 72 -8.2 -3.41325 | gap 1, opp_overlap 784693, overlap 784693 784696 784698 TATATTCTAACAATA GGAGAGCCTCA GTT TGAGACTC-CC GAGTTTATTCAAAAA TERM 667 784718 - 784696 - g 78 -10.6 -2.64313 | opp_overlap 784693, overlap 784695 784693 784698 ATATTCTAACAATAG GAGAGCCTCA GTT TGAGACTCCC GAGTTTATTCAAAAA TERM 668 784716 - 784698 - g 76 -9.6 -2.85813 | opp_overlap 784693, overlap 784695 784696 784693 ATTCTAACAATAGGA GAGCCTCA GTT TGAGACTC CCGAGTTTATTCAAA TERM 669 785224 - 785202 - g 77 -6.2 -4.72986 | opp_overlap 785204, overlap 785203 785204 TATTTTGATGAAAAA CCGGCTTCCA TGT TGGAAGCGTG TGTAAAAGTTGGAAA TERM 670 785304 - 785284 - g 70 -3.9 -4.88228 | overlap 785287 ATTCAATATCAAAAA GAAGTTCGG CTC CCGGACTTA GAAGCGGATTTATTG TERM 671 785301 - 785287 - g 71 -5.6 -4.53398 | overlap 785284 CAATATCAAAAAGAA GTTCGG CTC CCGGAC TTAGAAGCGGATTTA TERM 672 785590 - 785574 - g 77 -5.1 -5.13521 | AAAGCATGGAAAAAA GGCGTTA AAG TAATGCC CGGACGCTTTATGGG NAMH_0859 784599 - 785702 + | aminotransferase, class I and II NAMH_0860 785699 - 786160 + | hypothetical protein murC 786160 - 787464 + | UDP-N-acetylmuramate--alanine ligase NAMH_0862 787465 - 787590 + | hypothetical protein TERM 673 787661 - 787639 - g 70 -2.2 -5.24291 | AAAAGCAAAACAAAA TAATAAAA AATGAAA TTTTATTA AATGCGCTTGACGAT NAMH_0863 787611 - 787856 + | hypothetical protein TERM 674 788500 - 788490 - g 74 -5.4 -4.80455 | GATCTAAATATAAAA GTGT TTG ACAC AACTCCTATACACGC NAMH_0865 787866 - 788543 + | amino acid racemase NAMH_0864 790318 - 788540 - | ATP-dependent DNA helicase RecG TERM 675 789628 - 789644 + g 73 -4.5 -4.85177 | overlap 789629 CACGTCTTGCCTGAT TGGTATT TGA AATATCA TTTTTAATATCGTTT NAMH_0866 791471 - 790320 - | processing protease NAMH_0867 792047 - 791487 - | hypothetical protein TERM 676 791917 - 791932 + g 72 -4.8 -4.67635 | TAAACAGATTTATTT TGATTA TTAA TAATCA TTTTGTCATTTTCAA TERM 677 792630 - 792618 - g 70 -4.1 -4.6902 | overlap 792620 CTATAATTTCAAAAA GACCT ATT AAGTC GAATAGGGAACTTGC TERM 678 792959 - 792938 - g 83 -2.3 -5.85737 | gap 1 ATACTAACAAAAAAA CCTCTGGTTG CTT CAAA-AGAGG AAATAAAAATGAATC mraW 792104 - 793024 + | S-adenosyl-methyltransferase MraW NAMH_0869 793027 - 793320 + | hypothetical protein NAMH_0870 793373 - 796444 + | acriflavin resistance protein TERM 679 796973 - 796959 - g 73 -3.6 -5.12474 | TAGAACAGATAAAAA CACTTT CAC AAAATG GTATTAGTGAATTTG NAMH_0871 796460 - 797686 + | hypothetical protein TERM 680 798517 - 798507 - g 79 -5.4 -5.0666 | CATTTAAAAAACAAA CCTT TTA AAGG CAGTCTTGAAAATAT TERM 681 798946 - 798933 - g 87 -6.7 -5.47218 | TTGGATTTAAAAAAA GCAAG GGAA CTTGC CGTTAAGATGATCCA NAMH_0872 797670 - 799154 + | ATPase EC ATP-dependent Zn protease TERM 682 799420 - 799389 - g 72 -4.7 -4.7189 | opp_overlap 799409 AAAATATATAGAAAA TTTCATGAAAAAA GCAGGA TTTTTTAATGAAA AATATATAACAGACT NAMH_0873 799141 - 799626 + | hypothetical protein TERM 683 800523 - 800549 + G 71 -8.8 -2.96836 | overlap 800516 800521 800522 TTGCTATGGGTGCGA GTACCGTTAGTA TTC TTTTAACGGTAC CTTCTCTTATTTTCC NAMH_0874 799628 - 800743 + | putative calcium/proton antiporter TERM 684 801614 - 801598 - g 79 -4.5 -5.27476 | TTTAACAAAAGAAAA TTCGAAA GAC TTTCAAA AGAACAACAAGCGAT NAMH_0875 800848 - 801933 + | twin-arginine translocation pathway signal TERM 685 801924 - 801955 + T 81 -8.9 -3.78529 | overlap 801920 GAGAGACAGCGGATT TTTAGTATAACCC TTTTTC GGGTTATACGAAA TCTTTTAATACTTCT NAMH_0876 802572 - 801946 - | uba/thif-type NAD/fad binding fold protein NAMH_0877 803806 - 802562 - | hypothetical protein surE 804569 - 803799 - | 5'/3'-nucleotidase SurE TERM 686 804006 - 804023 + g 71 -6.3 -4.21701 | overlap 804018 GAATCCATATAGCCT GTAACCG AGCT TGGTTAC TTTGTATCCTTTTAT TERM 687 804018 - 804032 + g 79 -4.2 -5.28281 | overlap 804006 CCTGTAACCGAGCTT GGTTAC TTT GTATCC TTTTATTTCTTTTGT TERM 688 804199 - 804224 + g 84 -11.9 -2.70932 | opp_overlap 804199 AGAACCTGAGAAAAA GCGATAGACGG TATG CCGTGTATCGC TCCTTCAAAAGCACC TERM 689 804224 - 804199 - G 100 -11.9 -4.88388 | opp_overlap 804199 AGAACCTGAGAAAAA GCGATAGACGG TATG CCGTGTATCGC TCCTTCAAAAGCACC NAMH_0879 804594 - 805100 + | hypothetical protein TERM 690 805466 - 805447 - g 73 -3.6 -5.06414 | opp_overlap 805438, overlap 805448 GTTGGTGAAGAAAAA TTTCTTCT TTAC AGAAGAAG TTACGATGTGCCGCC NAMH_0880 805120 - 805809 + | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase TERM 691 805832 - 805800 - T 73 -7.9 -3.61591 | opp_overlap 805810, overlap 805793 CAAAAACGTATATAA TATAGACTAAGATCT TTC AGATCTTTTTCTATA ACGATTTATTCTCTC TERM 692 805810 - 805822 + T 82 -6.3 -4.9725 | opp_overlap 805800 TATAATATAGACTAA GATCT TTC AGATC TTTTTCTATAACGAT NAMH_0881 806547 - 805828 - | hypothetical protein TERM 693 806402 - 806373 - G 79 -3.7 -5.49569 | opp_overlap 806366, overlap 806366 806364 TAGGAATATAAAAAA TAGGATTTTTTAT TTTA AAAATAAATCCTA AAACAAAGCCAAGAG TERM 694 806980 - 807004 + G 81 -10.8 -2.91264 | opp_overlap 806980 806979 806982, overlap 806982 TTTAGGTCAAAAAGT TACTCCGGTA GACAG TGCCGGAGTA TATGTGCCTGGAGGC TERM 695 806982 - 807002 + G 71 -9 -3.0094 | opp_overlap 806982 806980 806979, overlap 806980 TAGGTCAAAAAGTTA CTCCGGTA GACAG TGCCGGAG TATATGTGCCTGGAG TERM 696 807241 - 807260 + G 77 -5.8 -4.82901 | TCCCAAAGTCGATGT TATTACCG GACC TGGTAATA TTTTTGTAGCAACCG hisD 806618 - 807907 + | histidinol dehydrogenase NAMH_0883 807908 - 808354 + | hypothetical protein TERM 697 808440 - 808417 - T 80 -6.1 -4.90778 | opp_overlap 808417, overlap 808421 TGTAGGGAAACAAAA GAAATAGAG ATTAAA CTCTATCTC TTAAGTTTAATGCAG rpsO 808702 - 808427 - | ribosomal protein S15 NAMH_0885 808824 - 810674 + | PAS/PAC sensor signal transduction histidine kinase NAMH_0886 810715 - 811131 + | transcriptional regulator, BadM/Rrf2 family TERM 698 811162 - 811141 - f 83 -6.7 -4.88295 | opp_overlap 811159 AAATAAAGTCAAAAA TTCACTAAA AATA TTTAGCGAA ATCACTGATTTAGGT TERM 699 812175 - 812153 - g 93 -7.8 -5.68039 | AAATTTAGAAAAAAA CCTCCTAAAA AGA TTTCAGAAGG TAAAAAAGCAACTAC TERM 700 812349 - 812325 - g 74 -6.4 -4.31379 | gap 1, opp_overlap 812325 812324, overlap 812315 ATCAACTGATTAAAA TCGCCGACCCT AATC AGGGA-GGCGA CTTACTTGACAGAAT flhA 811262 - 813313 + | flagellar biosynthesis protein FlhA NAMH_0888 814019 - 813315 - | putative methyltransferase TERM 701 815064 - 815054 - g 76 -2.6 -5.50499 | GCATATGCAAAAAAA TATT TAA AATA TGCAGGAGGTATTGT NAMH_0889 814070 - 815332 + | O-acetylhomoserine sulfhydrylase: MetY TERM 702 815386 - 815398 + G 86 -2.7 -5.7946 | GCTTAATAGCTTTTA GTATA TTT TATGC TTTTTTTATTGAAGA NAMH_0890 815316 - 817538 + | diguanylate cyclase/phosphodiesterase TERM 703 818615 - 818633 + G 70 -4.6 -4.79352 | ACGACAGTTTTTTGG TCGAGCTT GAA AAGTTTGA TTTTATTATCAGTGA metX 817564 - 818670 + | homoserine O-acetyltransferase NAMH_0892 818670 - 818843 + | hypothetical protein NAMH_0894 818840 - 819613 + | hydrolase, carbon-nitrogen family NAMH_0893 820656 - 819610 - | hypothetical protein TERM 704 819867 - 819855 - G 77 -3.3 -5.49729 | opp_overlap 819856, overlap 819856 819857 AATTATCCAAAAAAA GCCTT GCA ACGGC AAGATATCTTAAATA NAMH_0895 820741 - 821622 + | diguanylate cyclase TERM 705 821740 - 821752 + G 77 -4.9 -5.14563 | TATCGGAGGGCTTTT TTTAG CTT CTAAA TTTTTTCATCAAACA TERM 706 822037 - 822024 - g 84 -5.3 -5.5208 | TTATAAGAGAAAAAA TGCAA AATA TTGCA AAAAACAGCTTTATG cvpA 821624 - 822175 + | CvpA family protein lysS 822168 - 823676 + | lysyl-tRNA synthetase glyA 823691 - 824938 + | serine hydroxymethyltransferase TERM 707 824957 - 824943 - f 100 -12.8 -4.31293 | CTACATATTAATAAA CGGGGG TTT CCCCCG CAACTGAAAAAGGAG NAMH_0899 824978 - 825526 + | hypothetical protein TERM 708 825834 - 825821 - g 76 -4.5 -5.20606 | AAAGATGAAGAAAAA GCTGC ACCT GCAAC TGAAAATAAAACTGA NAMH_0900 825542 - 826204 + | hypothetical protein TERM 709 826268 - 826288 + G 89 -3.3 -5.95539 | opp_overlap 826268 ACAATCAAATAAAAC GCCTTTT CCCGAAA GAAAGGC TTTTTTTATTTGAAA NAMH_0901 826204 - 827601 + | anthranilate synthase component I NAMH_0902 827611 - 828987 + | putative CheC, inhibitor of MCP methylation TERM 710 829089 - 829070 - g 79 -3.6 -5.40474 | overlap 829053 ATTTTTTTAAAAAAA GTAACATT AAAG AGTGTTAC GGAAGATATAAGCTT aroE 828997 - 829764 + | shikimate 5-dehydrogenase murA 831024 - 829756 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase NAMH_0905 831862 - 831017 - | apurinic/apyrimidinic endonuclease TERM 711 831916 - 831905 - R 95 -4.4 -6.17033 | AAAAAAAAGAAAAAA GCTT AAGA AAGC TTAGGCCAGAGAAGT NAMH_0906 832242 - 831907 - | Hit family protein TERM 712 832369 - 832352 - g 71 -3.5 -5.11937 | gap 1, overlap 832342 AAGAACTTGAAAAAA CAAG-AGT TAA ACTACTTG GTAAAAACGGTGTTA TERM 713 832521 - 832498 - g 76 -3.9 -5.26918 | opp_overlap 832503, overlap 832515 ATAGCCGAGAAAAAA CAAGAGCTT GAAGAA AAGCTGTTG GAAGAGCAGCTAAAA pheS 832297 - 833283 + | phenylalanyl-tRNA synthetase, alpha subunit TERM 714 834945 - 834934 - g 76 -4.4 -5.1764 | TATATAACAGAAAAA GAGA AGAA TCTC AAAAAATAGCATTTG pheT 833280 - 835529 + | phenylalanyl-tRNA synthetase, beta subunit TERM 715 835595 - 835610 + G 93 -9 -4.78933 | GCTGATAAATCTATC TCGCAC AGAT GTGCGA TTTTCTCTCTTTTAA aroA 835526 - 836821 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 716 837583 - 837560 - g 70 -4.6 -4.74103 | gap 1, opp_overlap 837560, overlap 837563 GTTTGAAGGTAAAAA GCAC-TGCG GGATAAG CGCAGGTGC TTCTACACCGGAATG ispH 836811 - 837641 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 717 837992 - 837978 - g 70 -4.4 -4.70107 | TACCAAAAGAAGAAA TTTTTT ACA AAAAAA TAGACCACAGACAAT NAMH_0911 837638 - 838798 + | 30S ribosomal protein S1 NAMH_0912 838795 - 839235 + | hypothetical protein TERM 718 840475 - 840447 - g 77 -4.7 -5.13137 | overlap 840448 TAAAGAAATTAAAAA CGACACTTACAAA AAC CTTGTAAATATCA AAGTAATTACGGATG serA 839236 - 840804 + | D-3-phosphoglycerate dehydrogenase efp 840875 - 841438 + | translation elongation factor P apt 841486 - 842016 + | adenine phosphoribosyltransferase TERM 719 842745 - 842735 - g 84 -6.8 -5.20222 | opp_overlap 842734 842735 ACTAAATAAAGAAAA CAGG CTT CCTG ATTATGTAATAGCAT trpB 842052 - 843251 + | tryptophan synthase, beta subunit NAMH_0917 843254 - 843922 + | integral membrane protein TERM 720 845468 - 845480 + G 81 -9.1 -3.85698 | GACTCACCTTGATAT CGCAG GAC CTGCG TTTGTGGAAAAAGCA NAMH_0919 844197 - 845567 + | cytosol aminopeptidase TERM 721 846618 - 846601 - g 81 -7.7 -4.30576 | overlap 846612 GCTGGACTATTAAAA GAGGAAC AAAA GCTCCTC AGGCAGCCGGTGTAA ychF 845709 - 846803 + | GTP-binding protein YchF TERM 722 846893 - 846858 - g 84 -5.4 -5.4477 | gap 1, opp_overlap 846858 846889, overlap 846860 AAATTTCCAAAAAAA CTCC-TCAGGGGCTTTA CCT TGAAGCCCTTGACGGTG ACACCGTTTTACTCC TERM 723 846889 - 846899 + G 74 -6.8 -4.2828 | opp_overlap 846860 846858 CCTTGAAGCCCTTGA CGGT GAC ACCG TTTTACTCCCTAACA NAMH_0921 846800 - 847630 + | RNA binding S1 NAMH_0922 847641 - 849299 + | molybdopterin oxidoreductase TERM 724 849379 - 849365 - g 74 -6.4 -4.44974 | opp_overlap 849364 TTAAATGGCACAAAA TCGGAA GCG CTCCGA ATGCTTTACTTCTGA NAMH_0923 849286 - 849684 + | protein translocase subunit SecA NAMH_0924 849706 - 850155 + | hypothetical protein TERM 725 850184 - 850170 - f 73 -4.4 -5.0809 | AATAAAGTATAAAAA TAATTA TGT TAATTA AGCAATAAAGGGATT NAMH_0925 850202 - 850699 + | DapE downstream ORF 2 gph 850727 - 851359 + | phosphoglycolate phosphatase, bacterial NAMH_0928 851356 - 852723 + | putative FAD dependent oxidoreductase recR 853276 - 852713 - | recombination protein RecR msrB 853326 - 853712 + | methionine-R-sulfoxide reductase NAMH_0930 853702 - 854433 + | 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase TERM 726 854652 - 854640 - g 73 -7.7 -3.72765 | AATCCAAACTTCAAA CATGC TTT GCATG CTGCGGTAATGGACT NAMH_0931 854421 - 854927 + | appr-1-p processing enzyme family protein TERM 727 854958 - 854979 + G 88 -5.9 -5.69023 | opp_overlap 854958 854957 854960 AACATTTAAAAAATT TATCAGCAC AGAC GTGCTTATA TTTTTTTACTATTTT NAMH_0932 854920 - 855213 + | hypothetical protein NAMH_0933 855249 - 855560 + | hypothetical protein NAMH_0934 855553 - 856269 + | ABC transporter, ATP-binding protein TERM 728 856502 - 856514 + G 74 -9.1 -3.13299 | overlap 856500 ACCTAAAAGATCTGG CCGAG AAA CTCGG TATTACGTATCCTAC NAMH_0935 856327 - 856686 + | hypothetical protein NAMH_0936 856720 - 857205 + | hit family protein NAMH_0937 857749 - 857219 - | PhnA protein TERM 729 857842 - 857832 - H 72 -2.6 -5.32944 | TTTATAATGAAAAAA TAAT GAA ATTA TAAAGGAAACATAAT NAMH_0938 857856 - 858017 + | putative transposase in transposon NAMH_0939 858082 - 858552 + | hypothetical protein NAMH_0940 859361 - 858651 - | hypothetical protein NAMH_0941 860653 - 859361 - | membrane protein NAMH_0942 861264 - 860653 - | tripartite ATP-independent periplasmic transporter, DctQ component NAMH_0943 862686 - 861274 - | D-alanyl-d-alanine-adding enzyme NAMH_0944 862960 - 862688 - | acylphosphatase NAMH_0945 864009 - 862975 - | D-alanine--D-alanine ligase TERM 730 863837 - 863849 + g 76 -6.3 -4.59591 | TTATATTCTCCGCTT GCAAA ATA TTTGC TTTTCATGTTTTGTT ruvA 864560 - 864006 - | holliday junction DNA helicase RuvA NAMH_0947 866424 - 864544 - | hypothetical protein TERM 731 864873 - 864888 + g 91 -4.7 -5.77677 | TTTTAATAATAGTCG GGGAT GTTTTA ATCCC TTTTTTCTTGTTTTC NAMH_0948 866935 - 866411 - | hypothetical protein TERM 732 866609 - 866619 + gH 70 -8.2 -3.04517 | overlap 866608 TTTTAGACGTATATT CGCC GAA GGCG CTTTTGCACAAAGCT TERM 733 867624 - 867636 + GH 71 -6.3 -4.11216 | GTCAATATCGTATTT TCAGT AGC ACTGA TTTTCCCACTGAAAG mviN 866838 - 867839 + | virulence factor MviN protein TERM 734 868194 - 868206 + G 71 -7.7 -3.52849 | opp_overlap 868194, overlap 868192 CCTAAAGCCACCGAA TCGCT TGA AGCGA TGTTTGATCTGATTC TERM 735 869153 - 869142 - g 77 -3 -5.47821 | ACTCAGGCAAAAAAA GAAA AAGA TTTC GAAACGGCAGATAAA cysS 867849 - 869243 + | cysteinyl-tRNA synthetase NAMH_0950 869791 - 869240 - | hypothetical protein TERM 736 869734 - 869722 - G 75 -4.8 -4.91429 | overlap 869726 AAATCGTAAATAAAA CCGA TACAC TCGG TATAAAGGCAAGACT pyrD 869843 - 870922 + | dihydroorotate oxidase NAMH_0952 872295 - 870919 - | NADH oxidase TERM 737 871553 - 871568 + g 74 -3.2 -5.29445 | overlap 871554 TTATACCCGGTGGCT ACGATC GTAA GATCGC TTTTTATTGTTCGGG TERM 738 872542 - 872532 - g 74 -3.2 -5.33866 | CAAATCCACAAAAAA CCTC GCT GAAG GAGAATTTGACAAAA NAMH_0954 872347 - 873573 + | peptidase, M16 family NAMH_0955 873662 - 873874 + | putative transcriptional regulator TERM 739 874782 - 874772 - g 95 -2.6 -6.14618 | overlap 874776 TATAAAACAAAAAAA TAAA GCT TTTA AATATTATAATGAAA TERM 740 874807 - 874776 - g 72 -2.5 -5.36181 | overlap 874772 AAACAAAAAAATAAA GCTTTTAAATATT ATAATG AAAATTTAAAAAC ACCAGTTATGACCTC NAMH_0956 873864 - 874922 + | DNA methylase NAMH_0957 875518 - 874925 - | type II restriction enzyme MjaI TERM 741 875556 - 875583 + r 91 -5.6 -5.7827 | opp_overlap 875556, overlap 875572 AATAACTTCTTAAAA CACTCCTTTGTT TTCG GAAAAAGGGGTG TTTTTTCTTTATATT NAMH_0958 876052 - 875531 - | hypothetical protein TERM 742 875993 - 875983 - G 84 -8.2 -4.59089 | CAAGGTATAAAGAAA GGGC AAT GCCC CCGAATATTAATATA NAMH_0959 876708 - 876049 - | hypothetical protein NAMH_0960 877753 - 876710 - | putative membrane-associated zinc metalloprotease TERM 743 877135 - 877149 + g 73 -8.6 -3.20051 | opp_overlap 877129, overlap 877134 TTATAACATCTCCGC TCGGAA TGA TTCCGA CTATTTTTCTTTTGA TERM 744 877305 - 877317 + g 80 -6.3 -4.75063 | TCCCACGATTTAATT TCAAC ACC GTTGA TTTTTACAATTTTAT TERM 745 877604 - 877619 + g 72 -4.7 -4.71061 | opp_overlap 877604 CGCACTTAGACACCA GTTCG TATCCC CGAAC TTTTTACATATCAAT pgsA 878343 - 877750 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 746 878226 - 878204 - G 77 -4.9 -5.02476 | opp_overlap 878195 878193, overlap 878206 ACACCCGGGAAAAAA TCCCTGTTT ACCAA AAACAGGTA CATCAAAAACGCCAT NAMH_0962 879122 - 878343 - | 7-alpha-hydroxysteroid dehydrogenase dapA 879998 - 879132 - | dihydrodipicolinate synthase NAMH_0964 881308 - 880115 - | efflux ABC transporter, permease protein TERM 747 883074 - 883086 + H 77 -7.7 -4.10657 | CTGGTCAAGGTGATG CGCAA GTA TTGCG TTTTCAGGAGTATAC TERM 748 884452 - 884442 - g 73 -4 -5.04987 | overlap 884429 AATACCTTGAAAAAA GTAT GGT ATAC CGATGATGTCGGAAA NAMH_0967 884073 - 884570 + | outer-membrane lipoprotein carrier protein NAMH_0966 885333 - 884554 - | inositol monophosphatase 3 (IMPase 3) (IMP 3) (Inositol-1(or 4)-monophosphatase 3) NAMH_0968 886233 - 885355 - | heat shock protein HtpX NAMH_0969 887597 - 886317 - | hypothetical protein TERM 749 887372 - 887391 + g 72 -8 -3.50219 | ATTCTTCTCTCACTA TGATTTCA TAGT TGAAATCA TTATGTAAAGCTGTT NAMH_0970 889204 - 887675 - | hypothetical protein TERM 750 887857 - 887843 - G 73 -7.2 -3.96327 | opp_overlap 887843 887842 887845 ACGGCTGACTACAAA TATCTC ATT GAGATA CTTTGTAAAGAGTCC TERM 751 887919 - 887899 - G 73 -9 -3.31144 | opp_overlap 887890 887911 GTGCCAGGTTCATAA GGCTTGCC ATCAG GGCAAACC ATGTAGCCCTTTTAC TERM 752 888309 - 888324 + g 72 -4.8 -4.67641 | AAAATAATAATTGCG GTTTTA ATAA TAAAAC TTTTGGTTTTCGGAT bioA 890649 - 889354 - | adenosylmethionine-8-amino-7-oxononanoate transaminase TERM 753 890052 - 890064 + g 72 -4.9 -4.7153 | overlap 890057 AAATATTTTTATGAT GTTTT TCG AAAAC TTTTTCGGCTTCTTT TERM 754 890293 - 890278 - G 82 -9 -3.95584 | TTTCCAGTAATGAAA CGCCAT TTTA ATGGCG ACTTCCACTGCGCTG NAMH_0972 890727 - 892163 + | hypothetical protein ftsA 892174 - 893490 + | cell division protein FtsA TERM 755 893954 - 893941 - g 87 -2.3 -6.09196 | CCTAAAAGAAAAAAA CTTGC AGAA GCAGG TACAACGGAACTTAA TERM 756 894259 - 894241 - g 71 -3.1 -5.16237 | opp_overlap 894241 AACGCCATTAAAAAA GCAATCG AATCA CCATTGC TTGATAATCTTTCAA ftsZ 893500 - 894606 + | cell division protein FtsZ NAMH_0975 895392 - 894613 - | abc transporter, permease protein fliL 895442 - 895963 + | flagellar basal body-associated protein FliL TERM 757 896106 - 896085 - g 75 -7.3 -4.10453 | opp_overlap 896101 TAAATCTTCTCAAAA TGCAGCC GGTTTTTG GGCTGCA AAAGAAGCTTTTTCA acpS 895963 - 896304 + | holo-(acyl-carrier-protein) synthase NAMH_0979 896483 - 897064 + | putative lipoprotein TERM 758 897082 - 897092 + T 72 -2.6 -5.42131 | TTACTCTTTTATCCA TTTT TTT AAAA TTTTTTCTCTAATTC NAMH_0980 897855 - 897067 - | hypothetical protein TERM 759 897296 - 897279 - G 71 -6.3 -4.16943 | TCTGATATCCTAAAA TTGCCTC TTTA GAAGCAA CCATAATATCACACC NAMH_0981 899890 - 897866 - | putative bacterial signal domain protein TERM 760 898316 - 898333 + g 74 -5.7 -4.6856 | opp_overlap 898321, overlap 898318 898321 TTGTTTCAATATTGA TTTAATG GAAA CATTAAA TTTTTCCAATATTTC hemD 900846 - 900208 - | uroporphyrinogen-III synthase NAMH_0983 902401 - 900866 - | GMP synthase (glutamine-hydrolyzing) TERM 761 901093 - 901077 - G 70 -8.1 -3.27771 | overlap 901075 CCCATAACACCAACA CTTCTTA CGT TAAGAAG TACCGCAAAAGCCTG TERM 762 902461 - 902416 - R 100 -13.9 -3.54424 | TTTTACTCCTTTAAA TTTTTGCTTATTATTTAATTT CTCA AAATCAAATAATAAACAAAAA AAGGGATTAATAAAT TERM 763 902479 - 902464 - R 100 -7.6 -6.08342 | TAATAAACAAAAAAA GGGATT AATA AATCCC TAAAAGTTCGAATTG NAMH_0984 903778 - 902468 - | Na+/H+ antiporter NhaD TERM 764 903651 - 903661 + g 70 -4.6 -4.78326 | overlap 903643 GTACCGATAAACAGC GCCG GCT TGGC TTTGTTTATTTCAAA NAMH_0985 905198 - 903771 - | L-aspartate oxidase TERM 765 903796 - 903811 + g 72 -2.6 -5.22289 | gap 1, opp_overlap 903796 TCATCCTTTCTATAA TGTGCAC CAA GTG-ACA TTTTTCTATTTAGTG TERM 766 904497 - 904513 + g 77 -5.1 -5.10077 | opp_overlap 904511, overlap 904498 GCCTTCTCCTCTTAG CGCTTCT GTA AGAAGCA TTTTTTGAGATGTTT TERM 767 904498 - 904512 + g 77 -8.6 -3.6442 | opp_overlap 904511, overlap 904497 CCTTCTCCTCTTAGC GCTTCT GTA AGAAGC ATTTTTTGAGATGTT TERM 768 904703 - 904713 + g 76 -4 -5.28176 | overlap 904690 GATCAGCATAAATGT TGAA TTT TTCA TTTTTTCTAAATACA NAMH_0986 905373 - 905206 - | putative lipoprotein TERM 769 905341 - 905329 - G 76 -2.7 -5.55769 | overlap 905330 TCCGATAAGAAAAAA CGTTA TAA TAACA ATATGAAAAAAGCGA NAMH_0988 905572 - 905766 + | hypothetical protein NAMH_0987 906150 - 905749 - | ACT domain protein NAMH_0989 907447 - 906152 - | coenzyme f390 synthetase II NAMH_0990 907894 - 907487 - | phenylacetic acid degradation protein PaaI NAMH_0991 908405 - 907881 - | indolepyruvate oxidoreductase subunit IorB NAMH_0992 910270 - 908468 - | indolepyruvate oxidoreductase subunit IorA NAMH_0993 910384 - 910557 + | hypothetical protein TERM 770 911956 - 911940 - g 77 -5.8 -4.65512 | opp_overlap 911940 AAAAGAATCACAAAA CCTGCG GCAAT CGCAAG TATGCTTGTAGGATT NAMH_0994 910554 - 912197 + | sodium/proline symporter TERM 771 912186 - 912206 + F 100 -8.4 -5.89921 | ATCAAAAGAGCATTC GGAAGAAA CTGAT TTTCTTCC TTTTTTTGTTATAAT NAMH_0995 912243 - 912503 + | hypothetical protein TERM 772 913969 - 913956 - g 80 -6.7 -4.70879 | CGGAAAGTTTAAAAA GTCTG ACTA CAGAC ACTACCATCTTGAAG uvrC 912712 - 914547 + | excinuclease ABC, C subunit NAMH_0997 914544 - 915047 + | hypothetical protein NAMH_0998 915191 - 915511 + | hypothetical protein ribF 915508 - 916275 + | riboflavin biosynthesis protein RibF NAMH_1000 916824 - 916276 - | hypothetical protein NAMH_1001 917206 - 916817 - | hypothetical protein NAMH_1002 918571 - 917207 - | methyl-accepting chemotaxis protein TERM 773 917519 - 917552 + g 73 -4.5 -4.92239 | CCCTTTTCCGTTCAA TGTTTCGTGGTGCGC TCCG GCGTATAACGGTACA TTTTTGAATTTTTCA NAMH_1003 920099 - 918687 - | methyl-accepting chemotaxis protein TERM 774 920045 - 920057 + g 83 -6.3 -4.84033 | overlap 920041 920037 CCTCATGGATATATT GAGAA TAT TTCTC TTTTGCTTTTTCTAT NAMH_1004 920490 - 920101 - | hypothetical protein TERM 775 920711 - 920699 - g 75 -4.9 -5.0133 | GATGTTTCTAAAAAA TTTGA AGC TCAAA CAATACTATGTAATG TERM 776 921027 - 921008 - g 70 -4.4 -4.66535 | gap 1 AATCCTGAAAACAAA TCCAT-TCA AAG TGAAATGGA TAAAATTTCAAAATT NAMH_1005 920663 - 922603 + | abc transport system ATP-binding protein TERM 777 923312 - 923322 + G 84 -4 -5.69262 | TTTACGGTTCAATTT CATT ATT AATG TTTTTATTTTTATGG NAMH_1006 922606 - 923406 + | ribonuclease BN TERM 778 924614 - 924577 - g 75 -5 -4.98616 | gap 1, opp_overlap 924576, overlap 924571 924579 GGAAAAGACGAAAAA CTGATTTCTCTTGTTGA TAAAT TCAACA-GAGAACTCGG AATTGATATAAAAGA NAMH_1007 923494 - 925023 + | periplasmic [NiFeSe] hydrogenase large subunit NAMH_1008 925033 - 925953 + | hydrogenase TERM 779 925947 - 925937 - f 76 -5.4 -5.02287 | opp_overlap 925937 925932 925931, overlap 925932 TAGAAAAATATAAAA CCTT TAA AAGG ATTTAGTTATGAATG TERM 780 926151 - 926125 - g 74 -6 -4.54477 | overlap 926139 TGAAAACTTATAAAA CTTTTTCAAAAA GCT CCCTTGAAAAAG GACAAAGAGAACCGT NAMH_1009 925956 - 927719 + | methyl-accepting chemotaxis sensory transducer ppa 927750 - 928268 + | inorganic pyrophosphatase TERM 781 928312 - 928286 - f 82 -8.8 -4.03137 | overlap 928287 AGACAAGTAAGTAAA CTGTGAAGGATA ATT TTTCCTTCACAA CTTCACCACTTAACT TERM 782 928311 - 928287 - f 81 -10.1 -3.00798 | overlap 928286 GACAAGTAAGTAAAC TGTGAAGGATA ATT TTTCCTTCACA ACTTCACCACTTAAC acsA 928460 - 930415 + | acetate--CoA ligase TERM 783 930448 - 930467 + G 70 -4.2 -4.79683 | overlap 930451 TAAATAAAATATATC TCGGAGGG GTTT CCCTTCTA TTTATTTTATCGGTT TERM 784 930451 - 930465 + G 76 -7.8 -3.99938 | overlap 930448 ATAAAATATATCTCG GAGGGG TTT CCCTTC TATTTATTTTATCGG TERM 785 930875 - 930853 - g 71 -6.4 -4.2693 | opp_overlap 930853, overlap 930850 AACTGACTAAAACAA TGCTAAACTT TTT AACTTTAGCA TTCATAATATACATG NAMH_1012 930417 - 931781 + | histidine kinase NAMH_1013 931762 - 932412 + | two component transcriptional regulator, winged helix family NAMH_1014 932773 - 933105 + | inner membrane protein YjcH TERM 786 933405 - 933421 + G 74 -3 -5.32565 | AAAGGTTACGACGGA CTGATT TATTC AATCGG TTTTTTAGTTGGTTG NAMH_1015 933102 - 934748 + | Na+/solute symporter TERM 787 934809 - 934829 + G 93 -13.3 -3.35679 | CTTTCGATTTACTTA CGGAGGAGG AAC TCTCCTCCG TTGTAAATAACACGG TERM 788 935873 - 935851 - g 79 -8.5 -3.76373 | gap 1 TTCCGAATATTTAAA GACACTC-GG CTTT CCTGAGTGTC CGGGTAAAGTAATGG NAMH_1016 934757 - 936496 + | cyclic nucleotide-binding domain (cNMP-BD) protein NAMH_1017 936496 - 937107 + | exonuclease NAMH_1018 937340 - 937564 + | oxaloacetate decarboxylase, gamma subunit NAMH_1019 937554 - 939320 + | biotin/lipoyl attachment NAMH_1020 939321 - 940628 + | oxaloacetate decarboxylase beta chain NAMH_1021 941384 - 940632 - | hypothetical protein NAMH_1022 942526 - 941381 - | hydrolase TERM 789 941896 - 941886 - G 82 -3.2 -5.68438 | TTAGTAAATAAAAAA GCAA CAA TCGC TACAAAAAGCATATG NAMH_1023 942853 - 942578 - | flagellar hook FlgE argH 942930 - 944306 + | argininosuccinate lyase NAMH_1025 944299 - 944772 + | hypothetical protein TERM 790 945001 - 944985 - g 74 -2.1 -5.46629 | AAGATGCGAAAAAAA CGAAGCC TAC GCCTGCG GTATGGTTGCATATT NAMH_1026 944836 - 945240 + | beta-lactamase HcpA TERM 791 945910 - 945887 - g 75 -8.1 -3.78449 | overlap 945888 AATAATACAGGTAAA CGCTCGGCA AAAATA TGCCGAGCC GCATGTACCTTTGCG TERM 792 945909 - 945888 - g 83 -11.6 -2.85985 | overlap 945887 ATAATACAGGTAAAC GCTCGGCA AAAATA TGCCGAGC CGCATGTACCTTTGC NAMH_1028 945240 - 945929 + | protein phosphatase NAMH_1027 946807 - 945926 - | hypothetical protein NAMH_1030 946872 - 947000 + | hypothetical protein TERM 793 947002 - 946992 - T 80 -5.4 -5.22481 | TATAAAGAAAGAAAA GCTT TGT AAGC AGTATAAAAAAGACT NAMH_1029 947566 - 946976 - | L-lysine/ homoserine-homoserine lactone exporter family TERM 794 947066 - 947036 - G 90 -4 -5.77571 | opp_overlap 947036 947035 947033 947039, overlap 947039 AGCAAAAAACAAAAA GAGTGCTGAAGATA TTT TATTTACAGCATTC ATAATTTTTTCTTCA NAMH_1031 947608 - 948687 + | aminotransferase NAMH_1032 948798 - 949103 + | ATP synthase C chain TERM 795 949104 - 949129 + T 74 -7 -4.18058 | CCATTCTTAGGTTAA TAAAAAGCCC TTTTTC GGGTTTTTTA TTTTAACCTATACTT TERM 796 949809 - 949822 + T 75 -2.5 -5.57729 | CTTTGTATTCTTTAC TTATA TTCA TATAA TTTTTTGTATTCTTT NAMH_1034 951593 - 949914 - | hypothetical protein TERM 797 950424 - 950439 + g 80 -4.8 -5.38958 | overlap 950419 AATATAATTCTTTGA TAACAA ATGC TTGTTA TTTTTATTTATAAAT TERM 798 950955 - 950973 + g 71 -3.3 -5.20328 | TACTAATGATAAAGG TAATAAA ACTTC TTTATTA TTTATTTTTTTAGAA NAMH_1035 953496 - 951583 - | KAP family P-loop domain protein TERM 799 951848 - 951829 - G 84 -5.2 -5.47159 | opp_overlap 951829 951822, overlap 951822 TTCTAATACAAAAAA TAAATTTA AAAG TAAATTTA TATCTTGTTTACATT TERM 800 952174 - 952186 + g 80 -4.9 -5.23316 | TTTGTCAAACTTTTT CTTTT CTA AAAAG TTTTTTAATATAATA TERM 801 952577 - 952565 - G 71 -3.5 -5.17353 | opp_overlap 952565 ATAGGTATTAAAAAA TAAAT ATT ATTTA AATTTTCTTTTTTTA TERM 802 953613 - 953603 - R 95 -5.4 -6.12458 | opp_overlap 953603 TAAAAAAAGAAAAAA GACT AAA AGTC TTCATCTTCGTTTTC NAMH_1036 953823 - 953605 - | hypothetical protein TERM 803 953888 - 953874 - R 70 -7.1 -3.69364 | ATCGAAGAGACACAA TCCCG ACCAA CGGGA AGACAACTAACTCAT NAMH_1037 954597 - 954472 - | hypothetical protein NAMH_1038 955563 - 954727 - | hypothetical protein TERM 804 954865 - 954843 - G 72 -5.8 -4.44797 | opp_overlap 954843, overlap 954845 TTATGAATATTAAAA TATAAAAAAA TAT TTTTTTTACA TTATTATTATTAAGA NAMH_1039 957068 - 956178 - | hypothetical protein NAMH_1040 958611 - 957061 - | ATPase TERM 805 958320 - 958336 + g 87 -2.4 -6.0458 | opp_overlap 958320 CCGCCTGATTATTAA TAAAAA ACCTG TTTTTA TTTTTTTTCATTTGT NAMH_1041 959484 - 958657 - | probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) TERM 806 958919 - 958907 - G 71 -3.4 -5.07652 | GGTGTTAAAATAAAA CTCT CAGTC AGAG GATACACTACAGGCC TERM 807 959223 - 959209 - G 71 -5.6 -4.59109 | TATATCGGTTAAAAA GCCAAG TTT CCCGGC ATTTATCCCTAAAAT TERM 808 959569 - 959556 - H 75 -2.5 -5.55698 | opp_overlap 959559, overlap 959559 TATAATGGAAAAAAA TTATT ATTT AATAA ATTTATGCTATAATA NAMH_1043 959612 - 960109 + | bacterioferritin NAMH_1042 960686 - 960093 - | hypothetical protein TERM 809 960168 - 960190 + g 82 -4.2 -5.41746 | overlap 960154 960172 TCTTTTTTTCACGTA TGCGTAAAGA AAG TCTTTATTCA TTTTTTTACACAATT TERM 810 960248 - 960263 + g 72 -4.8 -4.81734 | TCCCTAAAGCATCCT GAATTT TCTT AAATTC TTTTTCATAATCTTT TERM 811 960431 - 960453 + g 74 -5.8 -4.57518 | TAAATTCAATTTGTT TAAGAAATTT AAG AAATTTTTTA TTTAATTTTTTTCTT TERM 812 960476 - 960490 + g 91 -2.2 -6.20267 | overlap 960467 TTTTTCTTCTTTTTT TAAGAA ATT TTTTTA TTTTTTTATTTTTAC NAMH_1044 961777 - 960671 - | MscS family inner membrane protein YnaI TERM 813 960734 - 960746 + g 88 -7.7 -4.84363 | opp_overlap 960734 960733 TGTAGGATAAGCAAG CTCGA GTT TCGAG TTTTTAATAATTTCA TERM 814 961678 - 961701 + g 84 -6.2 -5.25735 | overlap 961680 961689 GTCTATAAACTAATT TTTTTCTTTT TTTA AAAAGAAAGA TTTTTAATTTTTTAC aspS 961883 - 963649 + | aspartyl-tRNA synthetase TERM 815 963735 - 963713 - g 74 -9.2 -3.05046 | opp_overlap 963710, overlap 963698 963712 CGATGTTTTTAAAAT CGTAGGATTT GAT AAATCCTGCG GCAATTTTAAACAAA TERM 816 963887 - 963877 - g 76 -2.6 -5.58074 | GAATGACTAAAAAAA TTTA TGT TAAA AAGTTTGAATGTCCT NAMH_1046 963642 - 963911 + | FeoA domain superfamily NAMH_1047 963975 - 964553 + | adenylate kinase TERM 817 964957 - 964918 - g 73 -8 -3.64984 | gap 1, opp_overlap 964917 964924 964939 964940, overlap 964924 964939 964940 ATACTGGCCAAAAGA CGCAAAGCC-TTTATGGAA CAA TCCCGTAAACGGCTTTCCG GGCTTTTATATCAAA NAMH_1048 964553 - 965272 + | molybdopterin binding domain protein NAMH_1049 965284 - 966459 + | ggdef domain protein NAMH_1050 966456 - 966926 + | hypothetical protein NAMH_1051 968016 - 967153 - | CoB--CoM heterodisulfide reductase subunit B NAMH_1052 968986 - 968018 - | succinate dehydrogenase/fumarate reductase iron-sulfur protein TERM 818 968197 - 968209 + g 71 -3.3 -5.15634 | CCAGCATTCCCTCAT CAAGG ATT CCGTG TTTTTTAATAGAATG NAMH_1053 970703 - 968997 - | succinate dehydrogenase flavoprotein subunit NAMH_1054 972126 - 970705 - | glutamate synthase [NADPH] small chain NAMH_1055 972464 - 972129 - | hydrogenase expression/synthesis, HypA NAMH_1056 972975 - 972457 - | iron-sulfur cluster-binding protein CooF NAMH_1057 974117 - 973038 - | carbon monoxide-induced hydrogenase, large subunit NAMH_1058 974622 - 974107 - | carbon monoxide-induced hydrogenase, CooU subunit NAMH_1059 975122 - 974619 - | carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit NAMH_1060 975547 - 975119 - | hydrogenase-4 component I NAMH_1061 976503 - 975544 - | carbon monoxide-induced hydrogenase, CooK subunit TERM 819 976029 - 976015 - G 81 -7.8 -4.27316 | TTTTTTAAGTGAAAA CACAGC ATC GCCGTG CCCTACATATAGTGC NAMH_1062 979978 - 976493 - | CooM TERM 820 978239 - 978220 - G 75 -7.2 -4.26189 | TTATAAACCCTAAAA CGGCATTT GGGA AAATACCG AGTAAAAACGAAATA TERM 821 979251 - 979240 - G 78 -7.2 -4.28254 | GTGCAACACCCAAAA CCGC CAAA GCGG AATAATAAAATGTTT TERM 822 979865 - 979848 - G 72 -2.7 -5.2166 | overlap 979864 GAAGAACCTAAAAAA GCTATAC CAAG ATACAGC ACTTCAGCAGTACTT TERM 823 980117 - 980097 - H 70 -4.1 -5.03994 | opp_overlap 980096 980099 980115 TTCTACACATAAAAA GATAAAAAA AGT TTTTTTGTC CATTGATTATAATCA TERM 824 980645 - 980634 - g 70 -2.2 -5.23765 | overlap 980636 TAAAGAACACAAAAA GCCA CTTG TAGC GATAGAACTCGGTCG NAMH_1064 980185 - 982134 + | mcp-signal transduction protein TERM 825 982135 - 982147 + T 82 -7.7 -4.41716 | AATTTTAAATCTTAA TCCCT TTT AGGGA TTTCTTCTATAATCT NAMH_1063 982556 - 982131 - | hypothetical protein NAMH_1065 982946 - 982560 - | acetyltransferase, gnat family proS 984688 - 982964 - | prolyl-tRNA synthetase NAMH_1067 984933 - 984688 - | S4 domain protein TERM 826 985943 - 985931 - g 76 -7.7 -3.91412 | ATTACACTTGATAAA GGTGA AGC TCACC TTAAAGACGAAATCA argG 985046 - 986248 + | argininosuccinate synthase TERM 827 986332 - 986353 + T 79 -10.2 -2.87931 | opp_overlap 986331 CATTTTTCCTAATAT CGGAAGGA AATTTA TCCTTCCG TATGTGCCAAATGAG NAMH_1069 986756 - 986343 - | hypothetical protein NAMH_1070 987462 - 986812 - | phosphoribosyltransferase NAMH_1072 987560 - 988168 + | putative Fa2h protein rgy 991358 - 988140 - | reverse gyrase TERM 828 989468 - 989482 + g 70 -7.2 -3.7229 | CCTCGACTTCATTTG CGTTAA TAT TTAACG TTTGAAGTATTTTAT TERM 829 991618 - 991630 + G 76 -2.7 -5.46657 | opp_overlap 991614, overlap 991614 AATACATAAATTACC GATGT GGT ATATC TTTTTTATTCCGATA TERM 830 991929 - 991941 + G 70 -6.9 -3.79993 | opp_overlap 991929, overlap 991927 GTGTAGGTGCAAGCA GCGGG ATT TCCGC TATTTTCGTATCTCC NAMH_1073 991430 - 992752 + | chloride transporter, chloride channel (ClC) family TERM 831 992766 - 992745 - f 83 -8.1 -4.24002 | opp_overlap 992745 TTTCAAATCTTAAAA TCCATTGAC CGCA GTCAATGAA TTATATTCCACAAAA TERM 832 993622 - 993604 - g 77 -3.2 -5.41746 | AAGGTGCTAAAAAAA TCGAAA ACGACAA TTTCGA TCCGCTAATCGATCA hcp 992820 - 994241 + | hydroxylamine reductase TERM 833 994259 - 994274 + F 86 -3.9 -5.75478 | ATTCTCCTCCTTTGT GGGGC CTTTGT GCCTC TTTTTTTATATAATT TERM 834 994668 - 994706 + G 74 -3.3 -5.2894 | opp_overlap 994680, overlap 994672 ACACTGTAACAGCCG GATTTTTTAAAATGGTA AACGC TACCATTTGAAAATTTC TTTTATTTTCTCTTT TERM 835 994672 - 994702 + G 88 -7.1 -5.06411 | opp_overlap 994680, overlap 994668 TGTAACAGCCGGATT TTTTAAAATGGTA AACGC TACCATTTGAAAA TTTCTTTTATTTTCT NAMH_1076 994310 - 994699 + | putative conserved hypothetical protein NAMH_1075 995324 - 994689 - | putative transcriptional regulator NAMH_1077 997220 - 995424 - | 3-polyprenyl-4hydroxybenzoate decarboxylase NAMH_1078 997674 - 997210 - | hypothetical protein NAMH_1079 998131 - 997667 - | phosphohistidine phosphatase TERM 836 997956 - 997966 + g 81 -8.2 -4.17425 | TCCGCAGTCTGCTTT GCCC TTA GGGC TTTTGAAGTAATTAT NAMH_1080 999264 - 998128 - | methyltransferase small NAMH_1081 1001219 - 999273 - | putative DNA helicase TERM 837 1000156 - 1000183 + g 95 -3.4 -6.32976 | overlap 1000156 1000157 1000160 ACGATCTGGGCGTTC TCAAGGATATCA TCCA TGATTTCCTGGG TTTTTTTGTTTTTTT TERM 838 1000199 - 1000218 + g 84 -3.6 -5.61824 | overlap 1000194 TTTTTTTGTTTTTTT CATCAAAA AGTT TATTGATG TTTTTTTGGATTTTA TERM 839 1000339 - 1000349 + g 85 -4.6 -5.72118 | AGCCCTCTTCTTCTT CCGG GAG TCGG TTTTTTGTATTTTTT TERM 840 1000678 - 1000708 + g 84 -6.3 -5.14965 | opp_overlap 1000678, overlap 1000669 ATTGACTTGCTAAGA GCGATATTTTGGG AATCG TTTAAAATATCGC TTTTTTCCTGAGCCT NAMH_1082 1002479 - 1001895 - | hypothetical protein dnaB 1003888 - 1002488 - | replicative DNA helicase TERM 841 1003563 - 1003581 + g 76 -7.4 -4.07687 | TTTTTGATTTCGTTT GAGAGATG AAT CAGCTCTC TTTTAACCGCCAAAT TERM 842 1003946 - 1003924 - H 71 -2.1 -5.43487 | overlap 1003917 1003926 AAATTATATAAAAAA GGTTTTTAA TGATT TTAAAAATC ACATACCCTTACAAA TERM 843 1004105 - 1004091 - g 76 -3.6 -5.28166 | GAAAACGAAGAAAAA TTCAAA ATG CTTGAA AATGCAAAAGAAGAT NAMH_1085 1003932 - 1004189 + | hypothetical protein NAMH_1084 1004469 - 1004149 - | hypothetical protein ispG 1005518 - 1004466 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 844 1004861 - 1004881 + g 79 -4.6 -5.30348 | gap 1 TTCCGTCAAGCAGCA GCGC-TCCG AATG CGGCCGCGC TTTTTATTGTTGCGT NAMH_1087 1006254 - 1005544 - | hemolysin A NAMH_1088 1007348 - 1006464 - | glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) TERM 845 1006961 - 1006941 - G 77 -4.7 -5.19261 | opp_overlap 1006941, overlap 1006945 AAACGGAGGAAAAAA CTTACTGAA TTC TTCAGCCAG TTTAAGATTTTTTGA NAMH_1089 1008040 - 1007345 - | putative TrkA-N NAMH_1090 1009632 - 1008037 - | TrkA-N:Ion transport protein TERM 846 1009510 - 1009482 - G 86 -4.7 -5.71638 | overlap 1009483 1009485 TAATAACCAAAAAAA GCATAAAAAAATC AAA GATTTTTTTAGGA GTATAATCATCATCG TERM 847 1009509 - 1009483 - G 79 -8.2 -4.00543 | overlap 1009482 1009485 AATAACCAAAAAAAG CATAAAAAAATC AAA GATTTTTTTAGG AGTATAATCATCATC TERM 848 1009507 - 1009485 - G 80 -9.4 -3.55657 | overlap 1009483 1009482 TAACCAAAAAAAGCA TAAAAAAATC AAA GATTTTTTTA GGAGTATAATCATCA NAMH_1091 1011053 - 1009629 - | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B TERM 849 1012010 - 1012033 + r 78 -9.6 -3.3482 | opp_overlap 1012012, overlap 1012007 CTCCGAATTCTTTAA CACCGGTTAC TTTA GTAAGCGGTG TTGCTTCAGGCATTA NAMH_1093 1012780 - 1012334 - | CoA-binding NAMH_1094 1012886 - 1013161 + | non-specific DNA-binding protein NAMH_1096 1015340 - 1013400 - | hypothetical protein TERM 850 1013702 - 1013712 + g 73 -4 -5.19879 | ACTGTTCAACAAGTT CAAA GGC TTTG TTTTTGTCTTTCCCG TERM 851 1015311 - 1015325 + g 87 -2.2 -6.11229 | overlap 1015312 ATATGATATTTGGTC TTTAAA TTC TTTAAG TTTTTTTGTTTTCAT msrA 1015842 - 1015321 - | methionine-S-sulfoxide reductase dxs 1017649 - 1015835 - | 1-deoxy-D-xylulose-5-phosphate synthase NAMH_1099 1018431 - 1017646 - | flagellar assembly protein FliH fliG 1019449 - 1018424 - | flagellar motor switch protein FliG fliF 1021144 - 1019459 - | flagellar M-ring protein FliF TERM 852 1019978 - 1020001 + g 71 -3.3 -5.10077 | gap 1 GATATTGGTAAGTTC GAGTTTAGTT AAAGG AAC-AAACTC TTTTTTGCCGTCTTT TERM 853 1020722 - 1020741 + g 73 -8.6 -3.30459 | TTCGATTGTTCTTCC GAGTTCTC CTTC GAGAGCTC TTAGATATTTTACTT hisC 1022214 - 1021141 - | histidinol-phosphate aminotransferase TERM 854 1021270 - 1021288 + g 74 -2.4 -5.4251 | TTTTTTTAATAAATT TTCAGCAA TTT TCGTTGAA TTTTTTATATATAAC TERM 855 1021347 - 1021357 + g 76 -4 -5.24799 | overlap 1021351 1021353 AATCCAAACCGTTTT CTTT TGC AAAG TTTTTGTATTTCTCC NAMH_1103 1023295 - 1022228 - | P-protein NAMH_1104 1024040 - 1023270 - | HAD-superfamily hydrolase, subfamily IIA TERM 856 1023704 - 1023726 + gr 89 -8.5 -4.30576 | gap 1 TACTGTACAGTTTTA TCCCGAGCAG TACA CT-CTCGGGA TTTTCATAATCAAGA lysA 1025263 - 1024061 - | diaminopimelate decarboxylase NAMH_1106 1026310 - 1025288 - | putative permease YjgP/YjgQ pth 1026850 - 1026311 - | peptidyl-tRNA hydrolase TERM 857 1026895 - 1026884 - R 91 -7.2 -5.18866 | GTTAAAGAAAGAAAA CGGC GAAA GCCG TTAAAATTATTTAGC NAMH_1108 1027438 - 1026902 - | ribosomal protein L25, Ctc-form TERM 858 1027198 - 1027213 + g 70 -4 -4.93316 | gap 1, opp_overlap 1027188, overlap 1027199 CAACATGTAAAAGTT C-TCCTG TTA CAGGATG TTTTTGATATTCTTG TERM 859 1027199 - 1027211 + g 76 -7.7 -4.06487 | opp_overlap 1027188, overlap 1027198 AACATGTAAAAGTTC TCCTG TTA CAGGA TGTTTTTGATATTCT NAMH_1109 1028613 - 1027492 - | pilin biogenesis tal 1029569 - 1028616 - | transaldolase serB 1030260 - 1029640 - | phosphoserine phosphatase SerB NAMH_1112 1030351 - 1030578 + | component of Sec-independent protein secretion pathway TatA TERM 860 1030598 - 1030616 + G 71 -7.4 -3.66732 | opp_overlap 1030598 ATTAAACCTCATATA GCCGAG CTGCGTT CTCGGC TTATTAAAATAGTTG tatC 1030571 - 1031299 + | twin arginine-targeting protein translocase TatC NAMH_1115 1031464 - 1033308 + | hypothetical protein NAMH_1114 1034144 - 1033305 - | sensory box histidine kinase NAMH_1116 1035037 - 1034141 - | cation efflux family protein truD 1036110 - 1035034 - | tRNA pseudouridine synthase D NAMH_1118 1036839 - 1036171 - | hypothetical protein NAMH_1119 1037661 - 1036849 - | thiamine-monophosphate kinase TERM 861 1037614 - 1037628 + g 73 -4.3 -5.00027 | AACTGCAGCATCGTC TCCAA TGTGT TTGGA TTTTATATTTTTAAT NAMH_1120 1038233 - 1037727 - | aerotaxis sensor NAMH_1121 1039009 - 1038293 - | fumarate reductase, iron-sulfur subunit NAMH_1122 1039574 - 1038999 - | hypothetical protein TERM 862 1039693 - 1039680 - R 70 -3.8 -5.10516 | AAAAATGAAACAAAA CGGA AAATTA TCCG ATAGAGATTTTAACT NAMH_1123 1040517 - 1039687 - | CoB--CoM heterodisulfide reductase subunit B NAMH_1124 1041476 - 1040517 - | succinate dehydrogenase/fumarate reductase iron-sulfur protein TERM 863 1041602 - 1041648 + r 74 -5.4 -4.87318 | opp_overlap 1041608 1041609 1041615 GGAGACCATGTTAAG TGAAAAGTGCAAAGTGAA AAATGTAAAAG TTCACTTTTCACTCTTCA TTTTTAACTTTTCAC NAMH_1126 1043369 - 1041663 - | fumarate reductase flavoprotein subunit NAMH_1127 1044846 - 1043647 - | hypothetical protein TERM 864 1044021 - 1044037 + g 73 -3.7 -5.1101 | ATGTTACACTAAATC CGATTCT ATA ATAATCG TTTTTTGAATCCTGA NAMH_1128 1046014 - 1044848 - | acetylornithine aminotransferase NAMH_1129 1046518 - 1046024 - | hypothetical protein NAMH_1131 1046645 - 1048144 + | sulfate permease family protein priA 1049936 - 1048131 - | primosomal protein N' TERM 865 1048750 - 1048760 + g 71 -6.8 -4.1585 | TCTATAACTGCATCA GGGA AAA TCCC TTTTAAAACTTCTAA TERM 866 1049810 - 1049824 + g 79 -4.3 -5.28414 | TTTGAACTTCTTTTA CAACA TAACC TGTTG TTTTTCTGTTTCTTA NAMH_1132 1050355 - 1049933 - | putative N-terminal methylation TERM 867 1050074 - 1050086 + g 83 -6.3 -4.93877 | GTTTCCATCCCATTT TACTG TGC CAGTA TTTTGTTTAATAGGA TERM 868 1050378 - 1050405 + r 72 -5.7 -4.51765 | opp_overlap 1050379, overlap 1050379 1050382 CTTTAAATTAAGAAA ATAATAAGAGC GGAAAA GCTCTTATTAA TTTATTTCAGTTATA TERM 869 1050404 - 1050379 - R 93 -9.2 -4.84642 | opp_overlap 1050379 1050378 1050382 TTTAAATTAAGAAAA TAATAAGAGC GGAAAA GCTCTTATTA ATTTATTTCAGTTAT TERM 870 1050379 - 1050404 + r 77 -9.2 -3.29975 | opp_overlap 1050379, overlap 1050378 1050382 TTTAAATTAAGAAAA TAATAAGAGC GGAAAA GCTCTTATTA ATTTATTTCAGTTAT NAMH_1133 1050908 - 1050402 - | N-terminal methylation NAMH_1134 1051301 - 1051095 - | hypothetical protein NAMH_1135 1051519 - 1051298 - | hypothetical protein uvrB 1051587 - 1053617 + | excinuclease ABC, B subunit NAMH_1137 1053627 - 1054067 + | hypothetical protein NAMH_1138 1054085 - 1054624 + | transferase hexapeptide repeat protein TERM 871 1054790 - 1054753 - g 81 -7.7 -4.31329 | overlap 1054745 1054756 CCAAAAACTGCAAAA CAGGGATTTTAACGCTC CTCC GAGCGTAAAAAACCTCG ATACGGAGATAATGC TERM 872 1054787 - 1054756 - g 79 -10.2 -2.82962 | overlap 1054753 AAAACTGCAAAACAG GGATTTTAACGCTC CTCC GAGCGTAAAAAACC TCGATACGGAGATAA TERM 873 1055039 - 1055027 - g 71 -5.5 -4.48823 | AATGAACGTATAAAA GAGCT AAA AGCCC AAATCCGCCAGCAGT TERM 874 1055257 - 1055246 - g 74 -2.2 -5.56372 | AAACTAAAAGAAAAA GAAG ACAA CCTC AAAAGCCAAAAAGAA TERM 875 1056138 - 1056126 - g 91 -2.7 -6.01725 | AACAAAAACAAAAAA TCAAA GAG CTTGA AAGCGAACTTGAAGA TERM 876 1056499 - 1056487 - g 71 -3.3 -5.0538 | CTGGATTCCAAAAAA CAGCC TTG AGCCG TACAGACTGCCTAAA NAMH_1139 1054628 - 1056793 + | MutS2 family protein TERM 877 1057063 - 1057033 - T 100 -15 -3.94184 | opp_overlap 1057033 1057037, overlap 1057037 ACATTTAATACTAAA TAAAGTGACAGCTT ACA AAACTGTCACTTTA TCCTTAAATTAATCT TERM 878 1057033 - 1057063 + T 100 -12.8 -2.79952 | opp_overlap 1057033 1057037, overlap 1057037 ACATTTAATACTAAA TAAAGTGACAGCTT ACA AAACTGTCACTTTA TCCTTAAATTAATCT TERM 879 1057059 - 1057037 - T 100 -11.4 -4.56883 | opp_overlap 1057037 1057033, overlap 1057033 TTAATACTAAATAAA GTGACAGCTT ACA AAACTGTCAC TTTATCCTTAAATTA TERM 880 1057037 - 1057059 + T 85 -9.2 -4.07975 | opp_overlap 1057033 1057037, overlap 1057033 TTAATACTAAATAAA GTGACAGCTT ACA AAACTGTCAC TTTATCCTTAAATTA NAMH_1140 1057596 - 1057072 - | peptidyl-prolyl cis-trans isomerase TERM 881 1057770 - 1057789 + H 71 -8 -3.19653 | CTCTCAGCTGTCATT GTTTAACT TTGA AGTTAAAC TTAATAGAATTATAC NAMH_1141 1057874 - 1058314 + | thioredoxin 2 TERM 882 1058348 - 1058324 - T 74 -7.3 -4.00407 | opp_overlap 1058324, overlap 1058318 AGTTAAAAATGTAAA GTGAAAAGT GATTTAA ACTTTTCAC TTTTAACTCTTCATT TERM 883 1058324 - 1058348 + T 76 -7.3 -4.29928 | opp_overlap 1058318 1058324 AGTTAAAAATGTAAA GTGAAAAGT GATTTAA ACTTTTCAC TTTTAACTCTTCATT queA 1059380 - 1058370 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 884 1058824 - 1058846 + g 100 -9.8 -5.02074 | opp_overlap 1058817, overlap 1058827 AAATGTAAGCTCGCT GTAGGAGCGG CAA CTGCTCCTTC TTTTTTGGCAAATAC TERM 885 1058827 - 1058843 + g 100 -10.1 -4.61482 | opp_overlap 1058817, overlap 1058824 TGTAAGCTCGCTGTA GGAGCGG CAA CTGCTCC TTCTTTTTTGGCAAA NAMH_1143 1060499 - 1059432 - | twitching motility protein TERM 886 1059925 - 1059938 + g 80 -6.7 -4.68124 | opp_overlap 1059916, overlap 1059916 1059915 AGTGAAGCTCTTAGA GCGTT TAAA AACGC TTTTGTATCTCTTCC gatC 1060791 - 1060510 - | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 887 1060578 - 1060588 + g 70 -4 -4.93547 | GCTCTAATATCTCTT CAAT TAC ATTG TTTTTGATTGGTTCG hemL 1060844 - 1062106 + | glutamate-1-semialdehyde-2,1-aminomutase TERM 888 1062412 - 1062393 - g 87 -10.8 -3.3549 | overlap 1062391 1062397 TACAAAAGACGAAGA CGAACTCT TAGA AGAGTTCG AAAAGTAGATTAAAT NAMH_1146 1062106 - 1062420 + | hypothetical protein NAMH_1147 1063666 - 1062422 - | msha biogenesis protein mshg NAMH_1148 1065300 - 1063663 - | type II secretion system protein E TERM 889 1064256 - 1064234 - G 78 -7.8 -4.12456 | AGAGCACCGGCAAAA GTCAATCCAA CTT TCGGATTAAC CTGAACTTGTTGAAT NAMH_1149 1065842 - 1065297 - | hypothetical protein TERM 890 1065893 - 1065871 - H 70 -7.2 -3.70405 | opp_overlap 1065874 TATCAAAACAATCAA TTATAACAAA TTA TTTGCTATAA TTCCAAAAAAAAGGA ilvC 1065917 - 1066936 + | ketol-acid reductoisomerase TERM 891 1066941 - 1066998 + F 100 -13.9 -3.51232 | gap 1, overlap 1066964 CTAAAAACTAATTTT CTCCCTTTTTGGGACTTATAAAGTTTAC AAT GTAGATTTTATAAGTCACACAAAG-GAG TTAATTTGGCACAGG minD 1067004 - 1067813 + | septum site-determining protein MinD minE 1067810 - 1068043 + | cell division topological specificity factor MinE TERM 892 1068080 - 1068066 - g 86 -5 -5.61881 | opp_overlap 1068061 1068066 TCGTAAAAAGAAAAA GACTTC AAA AAAGTC TTTTAATTTAAAATA NAMH_1153 1068040 - 1069032 + | putative periplasmic protein TERM 893 1069055 - 1069045 - g 72 -2.6 -5.26247 | TGAAAACAAACAAAA TAAA ATA TTTA GGGTTTGATTTATAT NAMH_1154 1069029 - 1069736 + | DNA processing protein A NAMH_1155 1069753 - 1070271 + | hypothetical protein NAMH_1157 1070244 - 1070636 + | hypothetical protein NAMH_1156 1072022 - 1070610 - | diguanylate cyclase TERM 894 1070774 - 1070791 + g 71 -5.6 -4.58085 | TTTTTCTTATTTTTT CAGCAA CAAGCT TTGCTG TTTCTTTATCCGTAT TERM 895 1071198 - 1071212 + g 100 -7.2 -5.77853 | opp_overlap 1071198 1071197 1071200 AGGTATTACCGAAAG CATGAA ACC TTCATG TTTTTTTTCCACATT TERM 896 1071562 - 1071572 + g 74 -6.8 -4.38171 | opp_overlap 1071561 1071562 TTACCTGTTTCAAAT CCGT GAT ACGG TTTTAATGTAGTCTG panE 1072842 - 1072015 - | 2-dehydropantoate 2-reductase trmA 1074085 - 1072988 - | tRNA (uracil-5-)-methyltransferase fliP 1074870 - 1074142 - | flagellar biosynthetic protein FliP NAMH_1161 1075654 - 1074878 - | OmpA/MotB TERM 897 1075104 - 1075078 - G 80 -9.5 -3.66732 | opp_overlap 1075084, overlap 1075080 TAAGTATTTTAAGAA CACTTAGTGCC CTTGC GGCACTAAGTT CCCAGTTATCCGCAT TERM 898 1075102 - 1075080 - G 90 -12.1 -3.40878 | opp_overlap 1075084, overlap 1075078 AGTATTTTAAGAACA CTTAGTGCC CTTGC GGCACTAAG TTCCCAGTTATCCGC NAMH_1162 1076430 - 1075663 - | motility protein A-flagellar motor component NAMH_1163 1076478 - 1077761 + | UDP-N-acetylglucosamine diphosphorylase TERM 899 1078308 - 1078295 - g 83 -2.3 -5.79595 | overlap 1078305 1078306 TGGGAAAACAAAAAA GTGGT GATA ACCGC CGGAGGCAGCGTGGA coaBC 1077758 - 1078900 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 900 1079493 - 1079505 + G 82 -3.4 -5.71712 | opp_overlap 1079493 CTTTATAAAGACGAA CTTG ATTTG CAAG TTTTTTTATATAAAA NAMH_1165 1078881 - 1079576 + | hypothetical protein uppS 1079578 - 1080240 + | undecaprenyl diphosphate synthase NAMH_1167 1080291 - 1081037 + | peptidase A24A, prepilin type IV TERM 901 1081058 - 1081072 + G 74 -3.4 -5.25772 | overlap 1081059 CAAAATATCTTATTT CCGGCT TTT GGCCGA TTTTTATTATGATTT TERM 902 1081059 - 1081071 + G 70 -6.9 -3.73023 | overlap 1081058 AAAATATCTTATTTC CGGCT TTT GGCCG ATTTTTATTATGATT NAMH_1168 1081030 - 1082001 + | putative permease YjgP/YjgQ truA 1082040 - 1082711 + | tRNA pseudouridine synthase A NAMH_1169 1083378 - 1082677 - | putative alginate lyase AlyVOB TERM 903 1082746 - 1082730 - G 70 -2.1 -5.34555 | opp_overlap 1082731, overlap 1082731 TTATATCATAAAAAA CGGCTTC ACT GCAGCCT TTACACTGGTTATAA TERM 904 1082924 - 1082947 + g 70 -4.1 -4.82548 | TCATATCCGTTTTTT TTATATATT ATTGCA AATATATAA TTTTCTCTGTTTTTG NAMH_1171 1083843 - 1083505 - | hypothetical protein NAMH_1172 1084148 - 1083861 - | hypothetical protein TERM 905 1084633 - 1084655 + G 70 -2.1 -5.26875 | opp_overlap 1084633 ATAAATTTTCCAAAT GTAAAATTT AGAGG AATTTTTAC TTTTTTACTTCACGG TERM 906 1085000 - 1084949 - g 100 -7.5 -6.04953 | opp_overlap 1084952 1084972, overlap 1084950 1084952 ACATAAATAAAAAAA TGAGAATTCATGACATAAGACAC TTAGTG GCGTCTTATGCCATTAATTCTTT AGGATTAAGTGTTGA TERM 907 1084999 - 1084950 - g 100 -11 -4.19311 | opp_overlap 1084952 1084972, overlap 1084949 1084952 CATAAATAAAAAAAT GAGAATTCATGACATAAGACAC TTAGTG GCGTCTTATGCCATTAATTCTT TAGGATTAAGTGTTG TERM 908 1084952 - 1084997 + G 82 -9.9 -3.67417 | opp_overlap 1084950 1084949 1084952, overlap 1084972 TAAATAAAAAAATGA GAATTCATGACATAAGACACT TAGT GGCGTCTTATGCCATTAATTC TTTAGGATTAAGTGT TERM 909 1084997 - 1084952 - g 100 -13.6 -3.64572 | opp_overlap 1084952 1084972, overlap 1084950 1084949 TAAATAAAAAAATGA GAATTCATGACATAAGACAC TTAGTG GCGTCTTATGCCATTAATTC TTTAGGATTAAGTGT TERM 910 1084972 - 1084994 + G 76 -7.8 -3.96618 | opp_overlap 1084952 1084950 1084949, overlap 1084952 CATGACATAAGACAC TTAGTGGCGT CTT ATGCCATTAA TTCTTTAGGATTAAG TERM 911 1085104 - 1085125 + G 74 -6.7 -4.33653 | gap 1 AGTAAAAGAGTTGCT GAACGGATAT TAA AT-TCCGTTC TTTAATTTTTGGGTG NAMH_1173 1084225 - 1085130 + | phage integrase NAMH_1174 1085232 - 1085555 + | hypothetical protein NAMH_1175 1085555 - 1085779 + | hypothetical protein TERM 912 1085773 - 1085809 + F 91 -10.3 -4.07568 | opp_overlap 1085773 1085803 1085806 TAATTTTATTGAAAA GGACTAACTAAGTGCTT ATT AAGCATTTAATTAGCCC TTTTGGGCAAAAAAA TERM 913 1085809 - 1085773 - f 100 -12.5 -4.19704 | opp_overlap 1085773, overlap 1085803 1085806 TAATTTTATTGAAAA GGACTAACTAAGTGCTT ATT AAGCATTTAATTAGCCC TTTTGGGCAAAAAAA NAMH_1176 1085841 - 1086026 + | hypothetical protein TERM 914 1086027 - 1086053 + F 91 -4.6 -6.01725 | gap 1, opp_overlap 1086027 TTCTTAAGAAGCTAA GGGAA-AATGA AAAAGC TCATTCTTCCC TTTTTTCTTTTTATT NAMH_1177 1086033 - 1086455 + | hypothetical protein NAMH_1178 1086733 - 1088247 + | hypothetical protein NAMH_1179 1088247 - 1088669 + | hypothetical protein TERM 915 1088837 - 1088824 - gf 95 -3.1 -6.14618 | GACAAAATAAAAAAA GACTT TGTA AAGCC ATTAATATTAGATGA NAMH_1180 1088671 - 1089840 + | zonular occludens toxin (Zot) family TERM 916 1090860 - 1090874 + GF 88 -7.2 -4.86731 | opp_overlap 1090858 1090856 1090860 CTGTTTTAAAAGATA TTCCTA TAT TAGGAA TTTTATTTCAAAAAA NAMH_1181 1089800 - 1090990 + | hypothetical protein TERM 917 1091013 - 1090965 - f 100 -15.2 -4.16146 | gap 1, opp_overlap 1090965 1090968, overlap 1090968 AAAATACTCGCAAAA CAGCACCACGC-GAGGCGCGCCC GTGA GGACGCACCGCAGCGGGGTGATG TTTTGCCTCTTGGCC TERM 918 1090965 - 1091013 + F 100 -10.8 -4.28254 | gap 1, opp_overlap 1090965 1090968, overlap 1090968 AAAATACTCGCAAAA CAGCACCACGC-GAGGCGCGCCC GTGA GGACGCACCGCAGCGGGGTGATG TTTTGCCTCTTGGCC TERM 919 1090968 - 1091010 + F 83 -11.1 -2.83737 | gap 1, opp_overlap 1090968 1090965, overlap 1090965 ATACTCGCAAAACAG CACCACGC-GAGGCGCGCCC GTGA GGACGCACCGCAGCGGGGTG ATGTTTTGCCTCTTG TERM 920 1091010 - 1090968 - f 100 -15.5 -2.79272 | gap 1, opp_overlap 1090965 1090968, overlap 1090965 ATACTCGCAAAACAG CACCACGC-GAGGCGCGCCC GTGA GGACGCACCGCAGCGGGGTG ATGTTTTGCCTCTTG NAMH_1184 1091073 - 1092554 + | bacteriophage replication gene A protein (GPA) NAMH_1185 1092581 - 1092847 + | putative cupin domain protein TERM 921 1093029 - 1093011 - T 74 -7.4 -4.1466 | AGGCAAGGGTGAAAA GGTGAGGT AAG AGCTCACC GGGAATATGGCGACA NAMH_1186 1094150 - 1093182 - | putative TPR repeat protein TERM 922 1095091 - 1095109 + G 100 -10.4 -4.66318 | GCGGGAATTAATGCG GCTTTGAA AGC TTCAAAGC TTTTATTCAGATCGT TERM 923 1095365 - 1095350 - g 81 -7.6 -4.33851 | overlap 1095339 AAATTTTACAAGAAA GCTTTG TAAA CAAAGC GGCTCAGTATTTACA dnaG 1094194 - 1095816 + | DNA primase NAMH_1189 1095794 - 1096753 + | thiamine biosynthesis protein:ExsB NAMH_1188 1097530 - 1096745 - | hypothetical protein NAMH_1190 1099524 - 1097527 - | hypothetical protein NAMH_1191 1101327 - 1099546 - | peptidoglycan glycosyltransferase TERM 924 1100133 - 1100150 + g 74 -3.4 -5.24129 | overlap 1100134 TACCTTTTTTTTCAT TGGGAA GATCAA TTCCCG TTTTTTCTCCAAAGC TERM 925 1100707 - 1100718 + g 83 -5.8 -5.03145 | TTCGTTTTTTGCATT GACG ATTA CGTC TTTTTTGCCGGGTTC NAMH_1192 1101632 - 1101306 - | hypothetical protein TERM 926 1101620 - 1101604 - G 87 -2.3 -6.11392 | AAAGAAATAAAAAAA TTCTCAC AAA GTAAAAA CAGTCCTAACATTAT TERM 927 1101680 - 1101666 - R 88 -7.2 -5.07107 | GAAACTGCCAAAAAA GTTTAC AAA GTAAAC TATCAGCAGTCTTAT NAMH_1193 1102156 - 1101692 - | amino-acid acetyltransferase NAMH_1194 1102725 - 1102156 - | GTP-binding protein yhbN 1103180 - 1102722 - | cell envelope biogenesis protein YhbN NAMH_1196 1103680 - 1103177 - | hypothetical protein TERM 928 1103676 - 1103666 - G 95 -2.6 -6.22691 | TAACAACAAAAAAAA TAAA ACT TTTA CCATAGCGCTAAAAA NAMH_1197 1104165 - 1103674 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase hisB 1104735 - 1104166 - | imidazoleglycerol-phosphate dehydratase NAMH_1199 1105417 - 1104737 - | rare lipoprotein A NAMH_1200 1106754 - 1105414 - | regulatory protein dnir TERM 929 1106333 - 1106352 + g 74 -6.5 -4.43221 | opp_overlap 1106323 1106332 AAATAGCTAAGATAC TCAACTG CAGCTT CAGTTGA TTTTATCGGATCTTT NAMH_1201 1107500 - 1106751 - | deoxyribonuclease, TatD family NAMH_1202 1107607 - 1108920 + | NADP-dependent malic enzyme NAMH_1203 1109190 - 1109077 - | hypothetical protein NAMH_1204 1109240 - 1109755 + | molybdenum cofactor biosynthesis mog NAMH_1206 1109752 - 1110546 + | hypothetical protein NAMH_1205 1110870 - 1110538 - | hypothetical protein TERM 930 1110848 - 1110828 - G 100 -9.1 -4.83715 | AAGTCAAAAAAAGAA TAACAACGA TAA CCGTTGTTA AAAAAATCCAGTTAA rpiB 1111288 - 1110860 - | ribose 5-phosphate isomerase B pdxJ 1111338 - 1112117 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 931 1112256 - 1112284 + T 84 -5.3 -5.4477 | overlap 1112257 1112260 TCAGCTTTTTAAATT TCAACTGTTCG TAAATCC CGAACAGTAGG TTTTTTTCAGAATTT NAMH_1209 1114286 - 1112379 - | KAP family P-loop domain protein TERM 932 1112702 - 1112714 + g 91 -4.9 -5.85244 | overlap 1112689 ATTTTTTTAAGACTT GAAAA ACT TTTTC TTTTTTATTTTCCTT TERM 933 1113062 - 1113079 + g 70 -4.3 -4.77438 | opp_overlap 1113048, overlap 1113048 ATTTAATATCACAAT TAAAAAA CTGT TTTTTTA TTTTTGATAATAAAT TERM 934 1113341 - 1113361 + g 100 -11.3 -4.81212 | opp_overlap 1113358 CACTTTCAATTTTTT GCAATTCTT CTA AAGAATTGC TTTTCTTATAGTACA TERM 935 1113547 - 1113557 + g 86 -2.6 -5.77677 | opp_overlap 1113546, overlap 1113546 1113552 ATTAATAAATGATAT TTTT TTA AAAA TTTTTTATTATTTTC TERM 936 1113934 - 1113948 + g 72 -5.8 -4.42653 | opp_overlap 1113944 1113947 TGTTTAAACACTTTA TCTAAT GAA ATTAGA TTTTCTAAATCAACT TERM 937 1114121 - 1114137 + g 74 -3.1 -5.24531 | ATTTAATTTCTTTTT TTTTGTT TTC AATAAAA TTTTTTATAAAAAAT NAMH_1210 1114972 - 1114346 - | uba/thif-type NAD/fad binding fold protein TERM 938 1114583 - 1114593 + g 77 -3.2 -5.40072 | overlap 1114592 GCTTGCGTATATCCA GGGA ATG TCTC TTTTTTTAGAAAAAA TERM 939 1114592 - 1114610 + g 73 -7.6 -3.89605 | overlap 1114583 1114602 TATCCAGGGAATGTC TCTTTTTT TAG AAAAAAGA TCTATTTTTTTTCTC NAMH_1211 1116125 - 1114965 - | dihydropteroate synthase NAMH_1212 1116673 - 1116122 - | DNA polymerase III delta prime subunit HolB TERM 940 1116517 - 1116528 + g 95 -3 -6.32976 | AATATTTTTCGGCTG CAAT CAGA ATTG TTTTTTTGTTTTTTT NAMH_1213 1117203 - 1116670 - | hypothetical protein TERM 941 1116951 - 1116964 + g 83 -8.1 -4.44245 | TTCTTGCATGTTCAA GCTGG GGAA CCAGC TTTTGTAAATCGTAT NAMH_1214 1118411 - 1117203 - | asparate kinase, monofunctional class nudA 1118895 - 1118437 - | (Di)nucleoside polyphosphate hydrolase ((Di)nucleosidepentaphosphate pyrophosphatase) TERM 942 1120018 - 1120004 - g 72 -5 -4.65263 | overlap 1120016 ATCTCGGAAAACAAA CTCTTC AAA AAAGAG AATAAAATTTATTCT TERM 943 1120034 - 1120016 - g 71 -3.2 -5.03747 | opp_overlap 1120018, overlap 1120004 1120018 AAACTCTTCAAAAAA GAGAATAA AAT TTATTCTT ATGATTTTTTACTTG NAMH_1217 1118984 - 1120081 + | putative oxygen-independent coproporphyrinogen III oxidase flgH 1120842 - 1120129 - | flagellar L-ring protein FlgH TERM 944 1120878 - 1120906 + r 71 -3.1 -5.30189 | opp_overlap 1120878, overlap 1120879 AAGAGCAAAAACTAT TCCGTTTTACCCT TTA ATGTTAAAACGGC TTTTTTAATATTATC trpC 1121650 - 1120874 - | indole-3-glycerol phosphate synthase TERM 945 1121269 - 1121256 - G 73 -3.7 -5.19998 | opp_overlap 1121263 1121265, overlap 1121257 ATAAGCAAAATAAAA TCGGC CCCC GCCGC ATAAGCTTCGGCTAT TERM 946 1121632 - 1121649 + g 70 -2.1 -5.32608 | gap 1 TTTTTGTTTGAGCGA TGAT-CTT ATC AAGTATCA TTTTTTCCCTTTTTT NAMH_1220 1122888 - 1121647 - | tetratricopeptide repeat domain protein TERM 947 1121700 - 1121714 + g 77 -5.8 -4.77047 | ACTCTTTTATTTTTC TTTTGT GAT ACAAAA TTTCTTTGTCTTTTA NAMH_1221 1123288 - 1122905 - | hypothetical protein TERM 948 1123053 - 1123066 + g 79 -3.8 -5.45802 | opp_overlap 1123053 AAAATACAGGCATAA CCGT TTTTAT ACGG TTTTTCTTTTAAAGA NAMH_1222 1123986 - 1123303 - | methyltransferase small TERM 949 1123800 - 1123789 - G 70 -4.4 -4.65263 | opp_overlap 1123789 ATTTTTTAAAATAAA CTCA CTCA TGAG CTTTTGTTTTTCAAT kdsB 1124060 - 1124779 + | 3-deoxy-D-manno-octulosonate cytidylyltransferase pdxA 1124760 - 1125668 + | 4-hydroxythreonine-4-phosphate dehydrogenase NAMH_1225 1125722 - 1126552 + | putative rubrerythrin subfamily TERM 950 1126538 - 1126561 + T 100 -9.7 -5.65678 | AGAGCACTTGATGCG GTAAAAGGC AACTAA GCCTTTTAC TTTTTTATATTTTAT TERM 951 1126782 - 1126740 - T 82 -2.7 -6.04953 | opp_overlap 1126753, overlap 1126747 1126753 ATATAAATAAAAAAA GGAAGAAGATTAAGCTTTA GTTTT TAAAGCTTCTTCCGCTGCC TGATACCCAAGCTCA NAMH_1226 1127306 - 1126749 - | OorC subunit of 2-oxoglutarate:acceptor oxidoreductase TERM 952 1127276 - 1127258 - G 79 -9.6 -3.22491 | overlap 1127261 AAATTTCACCAGCAA GAAGGACA CCT TGTCCTCC AACCCCTGTAAATCT TERM 953 1127273 - 1127261 - G 73 -7.7 -3.75024 | overlap 1127258 TTTCACCAGCAAGAA GGACA CCT TGTCC TCCAACCCCTGTAAA NAMH_1227 1128136 - 1127306 - | OorB subunit of 2-oxoglutarate:acceptor oxidoreductase TERM 954 1127490 - 1127503 + g 79 -5.3 -5.13354 | CAATCCATGTTTTGT TTAGC TTGA GCTAA TTTATTTTTTCTACC TERM 955 1128077 - 1128094 + g 75 -9.9 -2.63905 | overlap 1128076 1128075 1128093 ACCGTCACCACATCC CCAACAC CATA GTGTTGG CATTTTGTCTGTTCT NAMH_1228 1129280 - 1128147 - | OorA subunit of 2-oxoglutarate:acceptor oxidoreductase NAMH_1229 1129579 - 1129280 - | OorD subunit of 2-oxoglutarate:acceptor oxidoreductase NAMH_1230 1130659 - 1129781 - | succinyl-CoA synthetase alpha chain NAMH_1231 1131831 - 1130659 - | succinyl-CoA synthetase beta chain NAMH_1232 1132448 - 1131894 - | C-terminal fumarate hydratase, class I NAMH_1233 1133318 - 1132458 - | fumarate hydratase, alpha subunit TERM 956 1132940 - 1132928 - G 76 -6.3 -4.53439 | opp_overlap 1132927 1132928 CCAAATCGAAATAAA TTACC GGC GGTAA GTTATATCCAGCTTT mdh 1134265 - 1133315 - | malate dehydrogenase, NAD-dependent TERM 957 1134287 - 1134304 + r 72 -8.5 -3.0395 | opp_overlap 1134287, overlap 1134290 CCTTTAAAAGGAAAA TAATCCC AAAA GGGATTA TCTTAAAGCATCTAT TERM 958 1134304 - 1134287 - R 89 -8.5 -4.67038 | opp_overlap 1134287 1134290 CCTTTAAAAGGAAAA TAATCCC AAAA GGGATTA TCTTAAAGCATCTAT NAMH_1235 1136521 - 1134302 - | isocitrate dehydrogenase, NADP-dependent TERM 959 1134557 - 1134574 + g 74 -3.5 -5.32396 | gap 1 GAAGTGGCTTCCTCT GTTG-TCA AGC TGACCAAC TTTTCTTTTTGGTGT TERM 960 1135882 - 1135897 + g 88 -6.2 -5.63517 | CTCCAGCTTCTACTG GAACTT CTTT AAGTTC TTTTTTGTTTCCAGC NAMH_1236 1137555 - 1136635 - | hypothetical protein TERM 961 1137640 - 1137627 - H 75 -2.5 -5.58454 | TTCATATTAAAAAAA TATTT TTTA AAATA GATCACAAGATTGTT TERM 962 1140203 - 1140189 - g 93 -7.2 -5.58209 | TGAAACTTAAAAAAA TACCTA TAA TAGGTA AAGGTTTGAGTTATT NAMH_1238 1137956 - 1140373 + | hypothetical protein NAMH_1237 1140735 - 1140370 - | transcriptional regulator, MerR family NAMH_1239 1141613 - 1140756 - | co-chaperone protein DnaJ TERM 963 1141124 - 1141135 + g 73 -4.4 -4.84529 | TTTGCCCGGTTTTAA TTCC TTCA GGAA TTTTTACCTTTATAC TERM 964 1141846 - 1141805 - R 70 -4 -5.1244 | gap 1 TTATTAATATAAAAA GAAAAATTAAAGGAA-CTT ATTTA AAGCTTCCATTAATCTCTC TTCAATAGCTTTTAA NAMH_1240 1143172 - 1141811 - | phosphomannomutase/phosphoglucomutase TERM 965 1142355 - 1142369 + g 83 -6.4 -5.00616 | opp_overlap 1142353 1142355 ACTTCACTTATAACA CATGGG TTA TCCATG TTTTTTGCAAAAAAG TERM 966 1142439 - 1142467 + g 76 -4.5 -5.093 | overlap 1142441 AAAAACGCAATCCTG TCCGCATCTCCGT CAA ACGCAAATGCGTA TTTTCTTGTTTTAAG TERM 967 1142441 - 1142465 + g 75 -7.1 -4.15118 | overlap 1142439 AAACGCAATCCTGTC CGCATCTCCGT CAA ACGCAAATGCG TATTTTCTTGTTTTA NAMH_1241 1143843 - 1143268 - | hypothetical protein NAMH_1242 1144715 - 1143840 - | hypothetical protein TERM 968 1144162 - 1144146 - G 73 -4.5 -5.00884 | opp_overlap 1144146 ATTGTCTTCAAAAAA TTTCAAA GCC CTTGAAA ATTCATCTTTATATA metG 1146683 - 1144776 - | methionyl-tRNA synthetase TERM 969 1146449 - 1146465 + g 77 -8.7 -3.68836 | overlap 1146447 AAGCTTTGAACTTTC CGCTGAT TTC ATCGGCG TATTCTTTTGGAGAT TERM 970 1146702 - 1146712 + r 77 -4 -5.40004 | overlap 1146706 TCTGCCCCTTCGTAT GTTT TTA AAAC TTTTTTAATTTCATA fbp 1147531 - 1146680 - | fructose-1,6-bisphosphatase mobB 1148026 - 1147541 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 971 1148684 - 1148670 - g 72 -5.8 -4.3739 | TATCTCGGCATAAAA TTTTTC GGT GAAAAA AAAGGAATTTTATTT NAMH_1246 1148088 - 1149341 + | hypothetical protein leuD 1149404 - 1149904 + | 3-isopropylmalate dehydratase, small subunit leuB 1149901 - 1150965 + | 3-isopropylmalate dehydrogenase TERM 972 1151023 - 1150995 - g 73 -8.3 -3.69332 | gap 1, opp_overlap 1150995 1150994, overlap 1150988 CAAGAATACTCGAAA CTCAAG-GCTTC AAACAA GAAGCTCTTGAG ATTTACGAAGAGTTG NAMH_1249 1150952 - 1151194 + | hypothetical protein NAMH_1250 1151203 - 1151451 + | hypothetical protein TERM 973 1152508 - 1152494 - g 83 -5.8 -5.06472 | opp_overlap 1152496 ACAGAAATAAGAAAA TATGAT AAA ATCATA ATTAAAAAGGGATAG NAMH_1251 1151429 - 1152523 + | CCA-adding enzyme purU 1152525 - 1153352 + | formyltetrahydrofolate deformylase NAMH_1253 1153363 - 1153500 + | flagellar basal-body M-ring protein flif NAMH_1254 1153493 - 1153951 + | RNA methyltransferase, TrmH family, group 2 TERM 974 1154409 - 1154396 - g 82 -3.1 -5.67283 | AATTCAAAGAAAAAA GCAGT GATG ACTAC TGGGTAGAAATTAAA NAMH_1255 1153948 - 1154433 + | hypothetical protein NAMH_1257 1154434 - 1154787 + | hypothetical protein NAMH_1256 1155691 - 1154774 - | DNA polymerase III, delta TERM 975 1155659 - 1155677 + g 81 -7.6 -4.28383 | opp_overlap 1155645 ACAATAATTCGGAAT TTTTGATA ATT TATCAAAA TCTTTTTTATACATT NAMH_1258 1155739 - 1156947 + | membrane protein TERM 976 1156927 - 1156954 + T 79 -5 -5.13343 | gap 1 TTATTAATGGCATTC GGAATGGATTACA GCT TTTAATCC-TTCC TTTTCTTTTCAATTG TERM 977 1157004 - 1157026 + T 72 -9.3 -2.73735 | opp_overlap 1157004, overlap 1157007 CGCTAAAATATAAAA GAAGAGTAA AAAGC TTACTCTTC TAATTCAAGCTGTTT TERM 978 1157026 - 1157004 - T 100 -10 -4.89567 | opp_overlap 1157004 1157007 CGCTAAAATATAAAA GAAGAGTAAA AAG CTTACTCTTC TAATTCAAGCTGTTT NAMH_1259 1158976 - 1157018 - | ribonuclease R NAMH_1260 1159770 - 1158979 - | hypothetical protein NAMH_1261 1160569 - 1159763 - | hypothetical protein TERM 979 1160504 - 1160523 + g 82 -5.2 -5.3658 | TAAAACTGTAACACT TAAAAAAA TATA TTTTTTTA TTTTGTTTTTATAAT NAMH_1262 1161299 - 1160562 - | hypothetical protein NAMH_1263 1162620 - 1161283 - | general secretory pathway protein D NAMH_1264 1163057 - 1162617 - | hypothetical protein NAMH_1265 1163665 - 1163054 - | hypothetical protein NAMH_1266 1165230 - 1163662 - | hypothetical protein TERM 980 1164581 - 1164593 + g 75 -4.9 -4.98531 | opp_overlap 1164581 1164579 TCAAACACACTAATA TCAAA ATT TTTGA TTTTTAGTTTACCGA TERM 981 1164903 - 1164918 + g 72 -4.8 -4.82855 | TCGAATCAATAATTT TATATC TTAT GATATA TTTTTCAGTTTCGTC era 1166108 - 1165227 - | GTP-binding protein Era TERM 982 1165883 - 1165907 + g 78 -2.4 -5.65496 | gap 1, overlap 1165885 ATGCTTTAAGAGCTT CTTTTAACATA AATT TAT-TTAAAAG TTTTTCTTTTTCGTG hslU 1167433 - 1166120 - | heat shock protein HslVU, ATPase subunit HslU TERM 983 1166706 - 1166719 + g 76 -6.7 -4.63089 | ATAATTCCGTTTTCA GCTCT TTTA AGAGC TTCTTTTTTCAAATC TERM 984 1167349 - 1167360 + g 77 -3 -5.46629 | GTCTGTTTCTAAGTG CAAT AGCT ATTG TTTTTTTGGCATCTT NAMH_1269 1167983 - 1167435 - | peptidase, T1 family rplI 1168423 - 1167983 - | ribosomal protein L9 TERM 985 1168076 - 1168087 + g 74 -3 -5.33866 | TGTTTTAATCTGTTT CATA TCAA TATG TTTTTTATCAATTTC NAMH_1271 1168510 - 1168935 + | methyl-accepting chemotaxis protein/sensory box protein TERM 986 1170112 - 1170100 - g 80 -4.9 -5.22289 | TATTAAATACAAAAA TCAAT TCA ATTGA AGACTTACAACAAAT NAMH_1272 1168935 - 1170143 + | hypothetical protein TERM 987 1170144 - 1170161 + G 79 -5.7 -5.14682 | opp_overlap 1170144 ATAAAAGGAATGTAA TGAAAAA ACTA TTTTTCA TTTTCTTTATTATAA NAMH_1273 1170143 - 1170523 + | hypothetical protein TERM 988 1172080 - 1172060 - g 70 -4.1 -4.71307 | TAAAAATCAAAGAAA TACTTACAA ACC TTTTAAGTA ACGCTATTAAGTTTA TERM 989 1173515 - 1173505 - g 73 -4 -5.13521 | AAATCACTTAAAAAA TTAG AAC CTAA AAAAATTATCGTATT NAMH_1274 1170520 - 1173612 + | sensor histidine kinase/response regulator TERM 990 1173698 - 1173682 - g 72 -5.9 -4.29928 | opp_overlap 1173682 AATTAATAGTGAAAA TCCTTTC TAA AAAAGGA TTTGAAGCTATTGAA NAMH_1276 1173618 - 1173986 + | response regulator DrrA NAMH_1275 1175037 - 1173973 - | hypothetical protein TERM 991 1175242 - 1175218 - g 75 -8.8 -3.36837 | AGAAGGCGGTAAAGA TTTTTTTGTG AAACA CACAAAAAAA ATGGATGAATTCGTT TERM 992 1176923 - 1176905 - g 89 -6.8 -5.70761 | opp_overlap 1176904 AAAAGAAAAGAAAAA CTTCTTTC ATC AAAAGAAG AATTTAAAGCACTAC NAMH_1277 1175105 - 1177552 + | metal dependent phosphohydrolase TERM 993 1179149 - 1179138 - g 70 -2.2 -5.22258 | TAAAGCAAAAGAAAA CGGT AGAA ACCA AGTTGTGTTATTTCA NAMH_1279 1177549 - 1179198 + | ggdef domain protein NAMH_1278 1179962 - 1179195 - | DNA polymerase III PolC-type TERM 994 1179397 - 1179412 + g 72 -2.6 -5.24129 | gap 1 TATTTAAGCCCATAT CTCTCTG CTT CA-AGAG TTTTTTGTGAAAGAG TERM 995 1181698 - 1181674 - g 76 -4.3 -5.07567 | GGAGACCCTAAAAAA GCATTGGCA AACGAAG TTCCAATGC CAGTTGTTACTCACG NAMH_1280 1180186 - 1181718 + | hypothetical protein TERM 996 1181727 - 1181740 + T 100 -8.1 -5.63517 | CGAGTAATATCTCCT CTCCC TTTC GGGAG TTTTTTATTTACACA TERM 997 1182035 - 1182053 + T 74 -7.4 -3.98683 | opp_overlap 1182032 1182036, overlap 1182036 CACTAATCTAAATCA ACTCCCAA AAA TTGGGAGC TTTAATTAATCTGCT TERM 998 1182036 - 1182052 + T 84 -10.9 -2.98487 | opp_overlap 1182036 1182032, overlap 1182035 ACTAATCTAAATCAA CTCCCAA AAA TTGGGAG CTTTAATTAATCTGC TERM 999 1182052 - 1182036 - T 89 -10.9 -3.57507 | opp_overlap 1182035 1182036, overlap 1182032 ACTAATCTAAATCAA CTCCCAA AAA TTGGGAG CTTTAATTAATCTGC NAMH_1281 1182311 - 1182072 - | cytoChrome c-553 NAMH_1282 1183130 - 1182438 - | C-type cytochrome biogenesis protein NAMH_1283 1183525 - 1183133 - | hypothetical protein hemG 1184754 - 1183525 - | protoporphyrinogen oxidase lgt 1185554 - 1184751 - | prolipoprotein diacylglyceryl transferase TERM 1000 1185009 - 1184998 - G 82 -4.4 -5.40474 | overlap 1184985 ATGCCTTCAAAAAAA GCTT CATA AAGC TGACTCGGATGCCTT TERM 1001 1186658 - 1186644 - g 72 -2.8 -5.2853 | overlap 1186645 CACCGAAAAATAAAA TCCAAA ATC TTTGGG ACAACCGAATGGCTC NAMH_1286 1185792 - 1187066 + | ferredoxin-type oxidoreductase selD 1188259 - 1187216 - | selenide, water dikinase NAMH_1288 1188646 - 1188290 - | hypothetical protein TERM 1002 1188547 - 1188566 + g 82 -7.8 -4.59109 | opp_overlap 1188549 GGAAAATTCTCACAT CATGCCCG CGTC CGTGCATG TTTTTAGCCAGTCTC NAMH_1289 1189040 - 1188759 - | periplasmic mercuric ion binding protein TERM 1003 1188874 - 1188887 + g 74 -6.7 -4.37711 | ACTGTCGCTTTTTTA GTGCT TAAA AGCAC TTTTGCCTTTACTAC TERM 1004 1188899 - 1188913 + g 71 -6.4 -4.17523 | GCACTTTTGCCTTTA CTACAC CGG GTGTGG TTTTAAGACTTCTTT TERM 1005 1189076 - 1189059 - R 77 -9.9 -2.73994 | opp_overlap 1189057, overlap 1189056 ATTCTCCCAAGAGTA CGTACTG AGCC CAGTACG GATAGCTTAGCATTA NAMH_1290 1189638 - 1189042 - | hypothetical protein NAMH_1291 1190750 - 1189638 - | transglutaminase family protein TERM 1006 1189973 - 1189983 + g 90 -8.2 -4.98758 | opp_overlap 1189972 GCCATGTGGTAATAT CGGC AAA GCCG TTTTTGTCGCTTTTT TERM 1007 1190353 - 1190370 + g 71 -3.3 -5.02357 | overlap 1190354 AAAAACTTTTTAACA TCTTCCG GTAT CGGCAGG TTTTGTTTGCTTGTG NAMH_1292 1191355 - 1190759 - | hypothetical protein TERM 1008 1192260 - 1192250 - g 71 -6.8 -4.27192 | AAAGCTGTAGGAAAA GCCA TAA TGGC CGGTTTAAACCCCGC fdhD 1191692 - 1192489 + | formate dehydrogenase family accessory protein FdhD NAMH_1294 1192499 - 1193224 + | ModE repressor domain protein TERM 1009 1194064 - 1194052 - g 75 -6.9 -4.17023 | opp_overlap 1194059 1194060, overlap 1194053 GGAATCATGGTAAAA CCGGG ACG CCCGA CAATGGCCGGGATTA NAMH_1295 1193221 - 1194453 + | moea protein TERM 1010 1194947 - 1194937 - g 71 -3.2 -5.19212 | AGCAGTAGGAAAAAA CTAC ACT GCAG CACAATTATTAAAAA NAMH_1296 1194503 - 1195891 + | putative diguanylate cyclase TERM 1011 1196698 - 1196688 - g 80 -2.6 -5.73978 | opp_overlap 1196688 ATGACAAAGAAAAAA TTTA CGG TAAA TGGATTTATGTAAAA NAMH_1298 1195955 - 1197346 + | diguanylate cyclase NAMH_1297 1197875 - 1197324 - | response regulator receiver domain protein TERM 1012 1197753 - 1197768 + g 71 -3.2 -5.07652 | opp_overlap 1197753 1197766 AGTTGTAAGAATAAA CGGAAT TTCA ATACCG TTTTGTTTTAAAAAC NAMH_1299 1198005 - 1197862 - | response regulator receiver domain protein NAMH_1300 1199482 - 1197992 - | histidine kinase TERM 1013 1198471 - 1198485 + g 70 -2.2 -5.28281 | overlap 1198472 AATGGCATATACATT TTTTAA TAC TTAAAG TTTTCTTTGTTTTGT TERM 1014 1198801 - 1198812 + g 71 -3 -5.16572 | TTTTATTTATTTCTT CTAA TTCT TTAG TTTTTTCCCTTACAT NAMH_1301 1200576 - 1199479 - | extracellular ligand-binding receptor TERM 1015 1199706 - 1199730 + g 85 -9.5 -3.90744 | opp_overlap 1199718 AAAAAGACGGCTGTT GATTTGGAAAA AGT TTTTTCAAATC TTCTTTGAACAAAAC TERM 1016 1200123 - 1200140 + g 91 -2.1 -6.25578 | TGGTTATTTTACGTT TAATTAA ATAA TTGATTA TTTTTTTTATTTCAT TERM 1017 1200252 - 1200237 - G 86 -4.8 -5.71712 | GGGCATATAAAAAAA TTGAAT TATC ATTCAA AAAAGGTAAAATTTC TERM 1018 1200274 - 1200257 - G 88 -7.1 -5.1101 | TTATCATTCAAAAAA GGTAAAA TTTC TTTTACC GTAGGTGTTCCGACT NAMH_1302 1200711 - 1202366 + | 4Fe-4S ferredoxin, iron-sulfur binding NAMH_1303 1202356 - 1203093 + | hypothetical protein NAMH_1304 1203119 - 1203286 + | hypothetical protein TERM 1019 1203331 - 1203293 - f 100 -7.5 -5.93809 | opp_overlap 1203297 1203300 1203307 GTTTTATAAAAAAAA GATATAACCGCAGAGCT TACCG AGCTTTGCCGTTATCTC TTACGAGATAAATCC TERM 1020 1203297 - 1203327 + F 76 -9.8 -3.07344 | opp_overlap 1203293, overlap 1203300 1203307 TATAAAAAAAAGATA TAACCGCAGAGCTT ACC GAGCTTTGCCGTTA TCTCTTACGAGATAA TERM 1021 1203300 - 1203324 + F 70 -7.1 -3.68024 | opp_overlap 1203293, overlap 1203297 1203307 AAAAAAAAGATATAA CCGCAGAGCTT ACC GAGCTTTGCCG TTATCTCTTACGAGA TERM 1022 1203370 - 1203423 + F 79 -6.9 -4.67038 | opp_overlap 1203379, overlap 1203379 1203380 TACTCCTAAAAGCAC TTTTAGGAATCCGGCCTTGTGAATT CTAA AATTTATAAGGCCGGCTTTGCAGAA TTTTAATTTTGCAGA TERM 1023 1203379 - 1203414 + F 95 -12 -3.60818 | opp_overlap 1203379, overlap 1203370 1203380 AAGCACTTTTAGGAA TCCGGCCTTGTGAATT CTAA AATTTATAAGGCCGGC TTTGCAGAATTTTAA TERM 1024 1203380 - 1203413 + F 100 -15.5 -2.76009 | opp_overlap 1203379, overlap 1203379 1203370 AGCACTTTTAGGAAT CCGGCCTTGTGAATT CTAA AATTTATAAGGCCGG CTTTGCAGAATTTTA TERM 1025 1203455 - 1203445 - f 83 -8.2 -4.34402 | opp_overlap 1203451 TTTTGCAGAGCAAAA CCGG GTC CCGG AGAGTCTTTAGACTT TERM 1026 1203531 - 1203556 + F 95 -12.7 -2.64155 | opp_overlap 1203528, overlap 1203528 1203527 GGGGTATCAAAGTGG TCCCGCAAAAT GAAC ATTTTGCGGGG TAAATTTAAAAAAGG TERM 1027 1203743 - 1203733 - g 86 -5.4 -5.60993 | overlap 1203716 TTCTTTACAAAAAAA CCAA AAA TTGG GAAATTTATTACAAA NAMH_1305 1203579 - 1203770 + | hypothetical protein TERM 1028 1204118 - 1204106 - g 80 -4.8 -5.2166 | opp_overlap 1204106 TAAGAACGGAAAAAA GGGT TAAAC ACCC TCTTAAAAAAGTTAA NAMH_1306 1203781 - 1204332 + | formate dehydrogenase TERM 1029 1205079 - 1205051 - g 70 -3.8 -5.00884 | ACTGGCTTCAAAAAA GATTTGCAGCCA AAAAA TGGATGCATACC AAAGGCTTTACACTT NAMH_1307 1204381 - 1206606 + | formate dehydrogenase subunit A TERM 1030 1206678 - 1206720 + G 77 -9.9 -3.01712 | gap 1 GTATCGAGTGTAACG CCTGTACGGTAGCCTGTGCG GAAG CGCACGAGCTACC-TGTGGG TATTCACAGAAGAAA NAMH_1308 1206617 - 1207213 + | formate dehydrogenase subunit B TERM 1031 1207499 - 1207481 - g 79 -5.3 -5.11613 | opp_overlap 1207481 ATAGGACCTAAAAAA TTCTCCC ATGAA GGAAGAA AGTTTTTAGTTTTCC TERM 1032 1207967 - 1207983 + G 86 -5.8 -5.4505 | ACTCATCTTTTTTTA GCGATG CTTAT CGTCGC TTTTTTCTTAACACA NAMH_1309 1207223 - 1208149 + | formate dehydrogenase subunit C TERM 1033 1208146 - 1208171 + F 76 -6.2 -4.60487 | opp_overlap 1208146 1208151, overlap 1208151 ACTTGCCGAAAAATG TTAAAGGGAG TTTTAT CTCCCTTTTA TTTTTAAAAATACTA TERM 1034 1208151 - 1208166 + F 84 -6.1 -5.26119 | opp_overlap 1208146 1208151, overlap 1208146 CCGAAAAATGTTAAA GGGAG TTTTAT CTCCC TTTTATTTTTAAAAA TERM 1035 1208218 - 1208203 - f 79 -3.3 -5.54264 | overlap 1208191 1208214 AAATATGCAAAAAAA GCATA AAAAAA TATGC AACTCATGCATAAAA TERM 1036 1208230 - 1208214 - f 91 -5.2 -5.77632 | overlap 1208203 AAAAGCATAAAAAAA TATGCA ACTCA TGCATA AAAGGATAAAAAATG NAMH_1310 1208243 - 1209175 + | putative bacterial extracellular solute-binding protein TERM 1037 1209539 - 1209529 - g 73 -4 -5.14477 | TACAGATTGAAAAAA TCTT AAA AAGA AACATTCAGCATCTA NAMH_1311 1209165 - 1210148 + | sulfate/thiosulfate import ATP-binding protein CysA NAMH_1313 1210193 - 1210951 + | sulfate/molybdate ABC transporter, permease protein ybbB 1211914 - 1210913 - | tRNA 2-selenouridine synthase NAMH_1314 1213961 - 1211895 - | molybdopterin oxidoreductase NAMH_1315 1214683 - 1213982 - | short-chain dehydrogenase/reductase SDR NAMH_1317 1214786 - 1215508 + | hypothetical protein NAMH_1316 1217455 - 1215497 - | sensory box/ggdef family protein TERM 1038 1216989 - 1216969 - G 70 -4.1 -4.71222 | opp_overlap 1216986, overlap 1216986 ATAGGAAAAGCAAAA CATATTTTA TTT TTAAATATG TAAAAATCTTTTTTA NAMH_1318 1218315 - 1217452 - | putative lipoprotein TERM 1039 1217816 - 1217826 + g 84 -4 -5.66989 | ACGATCAACGTCGGA GAAT GGT ATTC TTTTTTTACTATTTG NAMH_1319 1219231 - 1218356 - | auxin Efflux Carrier TERM 1040 1218843 - 1218827 - G 76 -3.7 -5.27335 | GCTTGCAAAGAAAAA TATACCG AAA CTGTATA TAAAAAATATATTCG NAMH_1320 1219532 - 1219233 - | hypothetical protein thrC 1221124 - 1219604 - | threonine synthase TERM 1041 1221458 - 1221439 - g 83 -7.2 -4.75288 | opp_overlap 1221439 1221442 TGATACTAAAACAAA CAACGTTT CAAA AAACGCTG TTGTAAAAGCAGAGA TERM 1042 1221769 - 1221742 - g 76 -4.3 -5.07652 | TCTTTTAAAAGAAAA CAAAATTCCTC AGGCAA GAGAAATTTTA AACACATTAAGAAGT NAMH_1322 1221362 - 1222228 + | hypothetical protein TERM 1043 1222226 - 1222246 + T 88 -11.3 -3.19192 | opp_overlap 1222226 1222231, overlap 1222231 AGCGTTATTCACAAA TAAAAGGGT TTT ACCCTTTTA TTCAATTGAATCAAA TERM 1044 1222246 - 1222226 - T 95 -11.3 -3.92075 | opp_overlap 1222226 1222231, overlap 1222231 AGCGTTATTCACAAA TAAAAGGGT TTT ACCCTTTTA TTCAATTGAATCAAA TERM 1045 1222241 - 1222231 - T 85 -6.8 -5.0065 | opp_overlap 1222231 1222226, overlap 1222226 TATTCACAAATAAAA GGGT TTT ACCC TTTTATTCAATTGAA TERM 1046 1222231 - 1222241 + T 79 -6.8 -4.72029 | opp_overlap 1222226 1222231, overlap 1222226 TATTCACAAATAAAA GGGT TTT ACCC TTTTATTCAATTGAA NAMH_1323 1222675 - 1222382 - | hypothetical protein TERM 1047 1222721 - 1222711 - H 88 -6.8 -5.31545 | overlap 1222681 AATAATACCAAAAAA TGCC GGT GGCA TTACACAAAGGTTAA TERM 1048 1223993 - 1223983 - g 74 -5.4 -4.79752 | opp_overlap 1223983 CGGAAGAATAGAAAA CGAA AAA TTCG TACTTGATATGAGAA selA 1222739 - 1224085 + | L-seryl-tRNA selenium transferase TERM 1049 1224920 - 1224936 + G 77 -5.9 -4.71426 | opp_overlap 1224909, overlap 1224908 1224921 AGAAGGAAAAGAGCT TTTCCAT AAT ATGGAAG TTTTGTTCATAAGCG selB 1224078 - 1225907 + | selenocysteine-specific translation elongation factor TERM 1050 1226218 - 1226200 - g 70 -2.4 -5.32565 | overlap 1226201 TAATGAATGAAAAAA GGTATCCA TCC TGAATACG TAAAATGCCAAGTTA rpmE 1226191 - 1226391 + | ribosomal protein L31 TERM 1051 1226458 - 1226444 - g 76 -7.8 -3.9226 | AAGACATCTCACAAA GAGCCC TTG AGGCTC TTAAAAATTCTGAAA NAMH_1327 1226392 - 1227180 + | hypothetical protein NAMH_1328 1227281 - 1227394 + | hypothetical protein trpB 1227357 - 1228568 + | tryptophan synthase, beta subunit NAMH_1330 1228578 - 1228886 + | hypothetical protein lepA 1231317 - 1229533 - | GTP-binding protein LepA TERM 1052 1229617 - 1229631 + g 72 -2.8 -5.3658 | TTTTTTACCTTTTTT CTGCTT TTC AAGAAG TTTTCTTTTTCTGCT NAMH_1332 1231913 - 1231347 - | hypothetical protein NAMH_1334 1231975 - 1235373 + | DNA polymerase III alpha subunit NAMH_1333 1236308 - 1235370 - | putative Galanin TERM 1053 1235827 - 1235811 - G 72 -2.9 -5.28176 | CTCACTCACAAAAAA CGTTCCT TTG AAGATCG TATGCCAGTGGGTCC NAMH_1335 1236865 - 1236305 - | LemA protein NAMH_1336 1238524 - 1236866 - | diguanylate cyclase/phosphodiesterase TERM 1054 1237027 - 1237037 + g 91 -2.4 -6.15717 | CTATAATCGTTTCTA CCAC TAT GAGG TTTTTTTTATGTTTA TERM 1055 1237252 - 1237265 + g 85 -6.7 -5.34055 | CAAAACCTATTTTTT TACCG GTAT CGGTA TTTTTTAATGTTTGT NAMH_1337 1238997 - 1238566 - | hypothetical protein NAMH_1338 1239096 - 1239350 + | RNA-binding protein NAMH_1339 1239571 - 1239458 - | hypothetical protein TERM 1056 1239743 - 1239729 - H 70 -4.4 -4.77567 | ACTCTTATAATAAAA TTTAAT GAA ATTAAA AAAAAGGAGCTTAAA NAMH_1340 1239758 - 1240102 + | hypothetical protein TERM 1057 1240091 - 1240109 + T 83 -6 -5.1517 | opp_overlap 1240086 AACGGAAAAATCCCT GCAGGA TGCTAAT TCCTGC TTTTTCCTTTATTTT TERM 1058 1240187 - 1240164 - T 91 -4.6 -5.95946 | gap 1, opp_overlap 1240168, overlap 1240165 1240169 TTAATAATAAAAAAA CGTAAGGCACA CCC TGTGCCCT-CA TTAGCGTTATCAGCC TERM 1059 1240183 - 1240169 - T 86 -10 -3.62012 | opp_overlap 1240168, overlap 1240165 1240164 AATAAAAAAACGTAA GGCACA CCC TGTGCC CTCATTAGCGTTATC NAMH_1341 1240541 - 1240197 - | hypothetical protein TERM 1060 1242463 - 1242440 - g 93 -9 -4.66953 | TGAATATGCCAAAAA GCTTCAAAAA GAGC TTCTTGAAGC CGATATTAATACTGA thrS 1240845 - 1242680 + | threonyl-tRNA synthetase TERM 1061 1243028 - 1243013 - g 72 -6.2 -4.45187 | AAACACATAAAAGAA TTCCTT GAAA AAGGAA AACACGTTAAACTAA infC 1242677 - 1243213 + | translation initiation factor IF-3 TERM 1062 1244390 - 1244378 - g 89 -3.5 -5.88061 | opp_overlap 1244378 AAAAAATTAAAAAAA TAATT GAA AATTA TAATTTCGAAAAAGC NAMH_1344 1243300 - 1244535 + | inner membrane protein YcdT NAMH_1345 1245349 - 1244537 - | flagellar protein FliY fliM 1246412 - 1245342 - | flagellar motor switch protein FliM NAMH_1347 1247094 - 1246405 - | RNA polymerase sigma factor, sigma-F TERM 1063 1246559 - 1246569 + g 93 -4 -6.01369 | overlap 1246564 TCTTTTTCGGTCATT GTTT TTA AAAC TTTTTTTATTGTTTC NAMH_1348 1247426 - 1247091 - | hypothetical protein NAMH_1349 1248302 - 1247436 - | ATP-binding protein-atpases involved in chromosome partitioning TERM 1064 1247497 - 1247509 + g 80 -6.3 -4.66264 | TCTTCTTCCAGCACT TTTCG TTC CGAAA TTTTTGCAAGTTTTC NAMH_1350 1249549 - 1248299 - | flagellar biosynthesis protein flhf flagella associated gtp-bindingprotein TERM 1065 1248583 - 1248598 + g 77 -3.4 -5.41787 | CAAATGTGTCTACTT TTAAAA AACT TTTTAA TTTTTCTATTTTTTC TERM 1066 1249285 - 1249275 - G 76 -6.8 -4.48987 | opp_overlap 1249275 1249274 CTGTTATAATTAAAA GACG GTT CGTC ATTTGAAAGGGAGGA folK 1250036 - 1249551 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 1067 1249818 - 1249792 - G 100 -10.2 -4.98857 | opp_overlap 1249791, overlap 1249778 ACGGAATTATAAAAA TCCGGTTGGTCA AGA TAACCAAACGGA GGGTTTTTATAAATA NAMH_1352 1250200 - 1250036 - | hypothetical protein TERM 1068 1250100 - 1250113 + g 84 -3.8 -5.65177 | opp_overlap 1250100 ATTCTTTTAATAATA GGTG TAAAAT CACC TTTTTTTATAGCTCT NAMH_1353 1251213 - 1250197 - | proline aminopeptidase TERM 1069 1251235 - 1251261 + r 80 -7.5 -4.21772 | opp_overlap 1251242, overlap 1251236 1251242 TCCACGCACTAAGAG TTAAAAAGAGT AATAA ACTCTTTTTAG TTATTGTTTGTTAGC TERM 1070 1251236 - 1251260 + r 72 -8.8 -3.11979 | opp_overlap 1251242, overlap 1251235 1251242 CCACGCACTAAGAGT TAAAAAGAGT AATAA ACTCTTTTTA GTTATTGTTTGTTAG aroQ 1251753 - 1251262 - | 3-dehydroquinate dehydratase, type II NAMH_1355 1251828 - 1253042 + | amidohydrolase NAMH_1356 1253676 - 1253047 - | major outer membrane protein TERM 1071 1253548 - 1253571 + g 79 -3.9 -5.4833 | TACATCAGTAGTGTT GTTATTGTC CTGCCA GCCAATAAC TTTTTTATTACCTGC NAMH_1357 1255816 - 1253687 - | DNA translocase FtsK TERM 1072 1254968 - 1254978 + g 90 -4 -5.89659 | GAATTGTTTTAGTTT TTCT ATA AGAA TTTTTATTTTTTTAT TERM 1073 1255290 - 1255300 + g 79 -4 -5.50774 | GAAATTATTTCATCA TTAG CCG CTAA TTTTTCTTTATTATC NAMH_1359 1255828 - 1255965 + | hypothetical protein NAMH_1358 1258601 - 1255956 - | flagellin family protein TERM 1074 1256223 - 1256238 + g 83 -4.7 -5.51402 | TATCGCACCCTGTAT TCCGA AGCTTC TCGGA TTTTTTTCACTGTCT xseA 1260158 - 1258821 - | exodeoxyribonuclease VII, large subunit alr 1261129 - 1260155 - | alanine racemase rpsR 1261514 - 1261230 - | ribosomal protein S18 ssb 1261998 - 1261525 - | single-strand binding protein rpsF 1262326 - 1261991 - | ribosomal protein S6 NAMH_1365 1264115 - 1262559 - | long-chain-fatty-acid--CoA ligase TERM 1075 1264222 - 1264202 - g 77 -4.7 -5.17353 | AGAGCTATTAAAAAA CCTTGAAAC TCT GATTCAAAG AACATATGAGGTTGA TERM 1076 1264363 - 1264353 - g 82 -5.4 -5.29885 | opp_overlap 1264353 AACTCAAAAACAAAA GAGT TCG ACTC TATTCCGAATACGGG NAMH_1366 1264164 - 1265111 + | histidine kinase NAMH_1367 1265665 - 1265180 - | putative pilin NAMH_1368 1266089 - 1265670 - | N-terminal methylation NAMH_1369 1267466 - 1266249 - | msha biogenesis protein mshg TERM 1077 1266950 - 1266963 + g 74 -3.1 -5.38348 | ACACTATAAACATCG GGTAA CGTG TTGCC TTTTTTAATCTTTTT TERM 1078 1267130 - 1267108 - G 71 -6.3 -4.12942 | gap 1, opp_overlap 1267108 TCAAATTTTTCAAAA GCGGAGGTTA AAGA CAACC-CCGC TTTAATATCATTTTC NAMH_1370 1269129 - 1267456 - | type II secretion system protein E NAMH_1371 1269647 - 1269126 - | hypothetical protein NAMH_1372 1270293 - 1269634 - | transformation system protein NAMH_1373 1270973 - 1270290 - | hypothetical protein TERM 1079 1270417 - 1270407 - G 70 -4 -4.92756 | overlap 1270409 AGCAGTAAAAATAAA TTTC TTA GAAA GCCTAAAATTGCCTT NAMH_1374 1272312 - 1270963 - | type II and III secretion system protein TERM 1080 1271859 - 1271887 + g 83 -6.9 -4.6902 | CTTTATAATTCGGAT TAGTATTTTTCAG TAT CTGAATAATATTA TTTTTCAAATTATCC TERM 1081 1272016 - 1272034 + g 76 -3.9 -5.30155 | opp_overlap 1272019, overlap 1272003 TTTTGTTTTGTTATA CGATACA ATTAA TGTATTG TTTTTTAATTCATAA NAMH_1375 1272677 - 1272309 - | hypothetical protein NAMH_1376 1273261 - 1272674 - | hypothetical protein TERM 1082 1273009 - 1273033 + g 79 -3.7 -5.47821 | ATTTCAAATCTTCAT TTAACGAAACA TTT TGTTTTTTTAA TTTTTTTAACTGGGT NAMH_1377 1274684 - 1273254 - | hypothetical protein NAMH_1378 1275138 - 1274689 - | prokaryotic N-terminal methylation motif domain protein NAMH_1379 1275582 - 1275139 - | hypothetical protein NAMH_1380 1276601 - 1275579 - | hypothetical protein TERM 1083 1275972 - 1275952 - G 74 -5.5 -4.68528 | AAAGTTAAAAAACAA TTATTACCA CTT TGGGAATAA TCCGATATCCTGTAT NAMH_1381 1277239 - 1276613 - | hypothetical protein TERM 1084 1276773 - 1276754 - G 73 -8 -3.57144 | opp_overlap 1276754 GCTTGTATTTGTAAA CTCAAAAT TTAA ATTTTGAG TTCCATAATCATTTT prfB 1278339 - 1277236 - | peptide chain release factor 2 TERM 1085 1278245 - 1278255 + g 74 -5.4 -4.7416 | TCTATTTCTTTTAAC CTTG CTT CAAG TTTTTCAGGTTTTAA panC 1278398 - 1279216 + | pantoate--beta-alanine ligase NAMH_1384 1284362 - 1279356 - | hypothetical protein TERM 1086 1280879 - 1280893 + g 77 -5.8 -4.65916 | TATTTTTTTCATTTT CATTAT TCC ATAATG TTTTATTCCAATCAC NAMH_1385 1284594 - 1284355 - | putative NADH dehydrogenase 5 TERM 1087 1285123 - 1285109 - g 73 -4.2 -4.8622 | GGCTGCAACCAAAAA TGCGCA TTT TGTGCA ATTCCAAATTTCAAA NAMH_1386 1284662 - 1285960 + | hypothetical protein TERM 1088 1286135 - 1286125 - g 86 -2.6 -5.9218 | CATATAATAAAAAAA TTTA TAT TAAA GACTGCGTTTTACCT TERM 1089 1286468 - 1286451 - g 79 -4.3 -5.25803 | AATTTCGATAAAAAA TATAAAA GAAA TTTTATA AGAGATGAATTTTCA TERM 1090 1286617 - 1286607 - g 84 -6.8 -5.09895 | TATTCATTTAAAAAA TCCG AAC CGGA AATAGATATAAAAAA NAMH_1387 1285941 - 1286894 + | tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) NAMH_1388 1287493 - 1287032 - | HAD fAmily hydrolase fragment TERM 1091 1287998 - 1287978 - g 86 -10.5 -3.61715 | opp_overlap 1287960 TAGTTGGTGCAATAA CCGCTTTTG AAC CAAAAGCAG GTGGCATAAGTGCAG NAMH_1389 1287605 - 1288936 + | putative curli production assembly/transport component CsgG subfamily NAMH_1390 1288947 - 1289417 + | hypothetical protein lspA 1289949 - 1289485 - | signal peptidase II glmM 1291289 - 1289967 - | phosphoglucosamine mutase rpsT 1291369 - 1291641 + | ribosomal protein S20 TERM 1092 1292157 - 1292141 - g 74 -6.6 -4.29738 | GGAGATTTACTAAAA GCGTAT TTAAG ATACGC CGACAACAAAGGCTG prfA 1291751 - 1292818 + | peptide chain release factor 1 NAMH_1396 1293641 - 1293234 - | ADP-ribose pyrophosphatase TERM 1093 1293384 - 1293374 - G 74 -3.2 -5.28942 | CACTGCAAACAAAAA CACA GCT TGCG GTATGAAGCCTCGGA TERM 1094 1293534 - 1293546 + g 93 -4.8 -5.98675 | opp_overlap 1293517 1293534 1293542, overlap 1293542 TCCTGGTAATGCAAA CCCA AGAGG TGGG TTTTTTCTTTTTATA NAMH_1397 1295749 - 1293764 - | chemotaxis protein TERM 1095 1294393 - 1294377 - G 75 -8.1 -3.72576 | opp_overlap 1294376 1294383, overlap 1294383 GTTCTGTCCATTAAA TTAAGAG CTT CTCTTAA GCTTTGATTCGCAAC NAMH_1398 1295880 - 1296335 + | bacterioferritin comigratory protein smpB 1296849 - 1296394 - | SsrA-binding protein proB 1297633 - 1296875 - | glutamate 5-kinase NAMH_1401 1298687 - 1297614 - | GTP-binding protein Obg/CgtA TERM 1096 1298441 - 1298456 + g 82 -3.2 -5.66684 | TTAAAATCAGATCTT CACCGT TCGC ACCGTG TTTTTTTCTGCCTTC rpmA 1299085 - 1298822 - | ribosomal protein L27 rplU 1299411 - 1299100 - | ribosomal protein L21 NAMH_1404 1299868 - 1299497 - | putative endoribonuclease L-PSP TERM 1097 1299833 - 1299845 + g 70 -4.1 -4.82154 | AGAATACGGACCTAT TGCTT CGG GAGCA TTTTTAGTATAAATT NAMH_1405 1301309 - 1300476 - | patatin TERM 1098 1301528 - 1301515 - R 90 -3.9 -6.01725 | opp_overlap 1301515 AATAAAAAGAAAAAA GATAA AAAA TTATC TTTTTGAGAATTGTG rpsI 1301922 - 1301524 - | ribosomal protein S9 rplM 1302344 - 1301922 - | ribosomal protein L13 TERM 1099 1302416 - 1302404 - R 70 -6.3 -4.31549 | GAAAACTTAAAAGAA CCTTA ATT TAAGG AAAGTTTAAGAAAAA NAMH_1408 1302923 - 1302459 - | hypothetical protein TERM 1100 1302636 - 1302653 + g 74 -5.6 -4.74917 | opp_overlap 1302636 ATGTTCGACACTAAA GAGCTT ATTTTC AAGCTC TTTTATGTATTTAAT NAMH_1409 1303425 - 1302916 - | hypothetical protein NAMH_1410 1304264 - 1303425 - | putative 4-hydroxybenzoate polyprenyltransferase miaA 1304340 - 1305194 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1101 1305194 - 1305172 - T 72 -5.8 -4.4204 | overlap 1305192 AAGAATTAGAAGAAA TTATTTTATC AGA AATAAAATAA AAAAACCCTCTATTA TERM 1102 1305228 - 1305192 - T 75 -4.7 -5.02323 | gap 1, opp_overlap 1305194 1305200, overlap 1305172 1305200 TTATCAGAAATAAAA TAA-AAAAACCCTCTA TTAAAT TTGAGGGTTTTTGTTA ATAGACTGTTTTAGA TERM 1103 1305219 - 1305200 - T 91 -3.5 -6.17669 | opp_overlap 1305194 1305200, overlap 1305192 AATAAAATAAAAAAA CCCTCTA TTAAAT TTGAGGG TTTTTGTTAATAGAC TERM 1104 1305200 - 1305219 + T 72 -3.5 -5.1356 | opp_overlap 1305200 1305192, overlap 1305194 AATAAAATAAAAAAA CCCTCTA TTAAAT TTGAGGG TTTTTGTTAATAGAC NAMH_1412 1306568 - 1305207 - | 3-deoxy-7-phosphoheptulonate synthase NAMH_1413 1308944 - 1306674 - | tetratricopeptide repeat domain protein TERM 1105 1306807 - 1306827 + g 75 -6.9 -4.18697 | CTTGCTTTATCTTCC CCTTTTACT CTC GGTAAGAGG TTTTGCAATACTTTT TERM 1106 1308793 - 1308807 + g 95 -2.8 -6.22802 | overlap 1308794 TTGTCAAAATAGCAT TCGACA CTC TGTTGG TTTTTTTTTATACAC TERM 1107 1308986 - 1308939 - G 89 -3.1 -5.77677 | gap 2, opp_overlap 1308950 1308976, overlap 1308932 1308976 TAAAAGAAGAAAAAA TTTCAACTTCAGCCTTTTTGCTA ATTA TAGCAAA-AGACT-ACATTGAAA TTGTAGTGTTAAATA NAMH_1414 1310313 - 1308976 - | putative NADH dehydrogenase i chain l TERM 1108 1309469 - 1309449 - G 100 -10.5 -4.53419 | CAGTATAAGAATAAA CACTTGCAG CCG CTGCAAATG GAATTAATGCATAAC TERM 1109 1310233 - 1310221 - G 73 -7.7 -3.86897 | opp_overlap 1310205 1310217 1310216 1310221, overlap 1310229 1310230 TGCACTTGCTATAAA TGCAG CAA CTGCA ATTAATTTTGCAATA TERM 1110 1310243 - 1310258 + g 72 -6.2 -4.4009 | opp_overlap 1310230 1310229 ACTGCAATTAATTTT GCAATA AAAA TATTGC TTTTATAAAATACCG NAMH_1415 1311740 - 1310313 - | NADH-quinone oxidoreductase chain m TERM 1111 1311595 - 1311579 - G 76 -6.5 -4.62471 | opp_overlap 1311581, overlap 1311581 TCCAAGTTCTAAAAA CCCTTCC TGC GGAAGTG CGTTATACCAACTAA NAMH_1416 1313594 - 1311741 - | NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hdehydrogenase I, chain 5) TERM 1112 1311785 - 1311769 - G 70 -8.1 -3.16553 | overlap 1311767 ACAATTATTAAGATA GCAATAA CGA TTATTGC AACACCAATTACGAA NAMH_1417 1313895 - 1313587 - | NAD(P)H-quinone oxidoreductase chain 4L (NAD(P)Hdehydrogenase I, chain 4L) NAMH_1418 1314365 - 1313898 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily NAMH_1419 1314946 - 1314362 - | NADH dehydrogenase subunit i NAMH_1420 1315919 - 1314948 - | NADH-quinone oxidoreductase chain 8 NAMH_1421 1317578 - 1315929 - | NADH-ubiquinone oxidoreductase NAMH_1422 1318061 - 1317588 - | NADH-ubiquinone oxidoreductase 20 kda subunit NAMH_1423 1318383 - 1318045 - | putative proton-translocating NADH-quinone oxidoreductase, a subunit NAMH_1424 1320255 - 1318543 - | aaa family atpase TERM 1113 1319907 - 1319919 + g 71 -7.7 -3.59984 | opp_overlap 1319907 1319906 CAGGAATAACCAAAT CAAGG CTA CCTTG TTCTATCAGTTTTAA TERM 1114 1320221 - 1320237 + g 70 -3.7 -4.95843 | overlap 1320223 1320229 ATTTTACTTTTTTTA GGGTTTT GTA AAAACAC TTTTATGTTTTGTAT TERM 1115 1320825 - 1320810 - g 74 -3.2 -5.26247 | GGAAAAGAAATAAAA TGCGGT TTTT ACAGCA GCTATCCTTTTTTAA NAMH_1425 1320306 - 1320965 + | hypothetical protein NAMH_1426 1322333 - 1320966 - | hypothetical protein TERM 1116 1321142 - 1321152 + g 79 -4 -5.45726 | opp_overlap 1321134, overlap 1321132 AAAAATGCAGTTTTT TACT GTA AGTA TTTTTTTCAGATATA NAMH_1427 1324396 - 1322330 - | hypothetical protein TERM 1117 1323768 - 1323783 + g 86 -2.6 -5.89659 | overlap 1323769 ACTCTTAAAAGAGTA TCAAAA CCTT TTTTGG TTTTTATTTTTTTAT TERM 1118 1324297 - 1324319 + g 72 -4.8 -4.8269 | overlap 1324298 TATTTTGTAAATACT TGACAGCCGT TTC ACTGTTGTCG TTTTTAATCATTGTA NAMH_1428 1326926 - 1324422 - | hypothetical protein TERM 1119 1325726 - 1325746 + g 70 -6.9 -3.82923 | AATATCCTCCCCATT CTGTTTTTG CGG CAATAACAG TCTTTTGATTAGCTT TERM 1120 1326334 - 1326344 + g 82 -5.4 -5.29885 | opp_overlap 1326334 1326329 TAATCTATAACTATA GGAA TAA TTCC TTTTGTTTTTGCATT TERM 1121 1326638 - 1326650 + g 77 -3.5 -5.57729 | overlap 1326636 TTAATTTTTTGATTT TATTT AAT AAATA TTTTTTGTATTCTTT NAMH_1429 1328271 - 1326904 - | hypothetical protein TERM 1122 1327436 - 1327413 - G 84 -3.8 -5.63103 | TTCTAAGTAAAAAAA TAGCCATAGC CGGA GCAATTGCTA AATAAGCTAAAAAAA NAMH_1430 1329755 - 1328271 - | glycosyl transferase, group 1 NAMH_1431 1330566 - 1329745 - | hypothetical protein TERM 1123 1330289 - 1330306 + g 73 -8.5 -3.26545 | GCTTTCAATCGAAGG TCAGGAT TTAA ATCCTGA TTAGTAATATATGAA NAMH_1432 1331863 - 1330703 - | hypothetical protein NAMH_1433 1332345 - 1331860 - | putative lipoprotein TERM 1124 1332014 - 1332026 + g 72 -4.7 -4.67354 | CTAACTGCGGGTTCA CCGTC TAT GCCGG TTTTATATCTGTATT rdgB 1332996 - 1332409 - | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family NAMH_1435 1334270 - 1332993 - | putative periplasmic protein TERM 1125 1333796 - 1333807 + g 89 -3 -5.77571 | TATCCCCCAAATTAC CAAA TTTA TTTG TTTTTATTTTTTCCT NAMH_1436 1335229 - 1334270 - | putative periplasmic protein TERM 1126 1334719 - 1334744 + g 81 -10.7 -2.90234 | opp_overlap 1334722 1334725, overlap 1334704 1334716 1334714 1334722 1334725 GTTTATTGTTGTCCA TAACAATACAA CCTT TTGTATTGTTA TCATCTCTTTTTCCT TERM 1127 1334741 - 1334722 - G 70 -8 -3.28924 | opp_overlap 1334704 1334719 1334716 1334714 1334722 1334725, overlap 1334725 TATTGTTGTCCATAA CAATACAA CCTT TTGTATTG TTATCATCTCTTTTT TERM 1128 1334722 - 1334741 + g 73 -8 -3.57173 | opp_overlap 1334722 1334725, overlap 1334704 1334719 1334716 1334714 1334725 TATTGTTGTCCATAA CAATACAA CCTT TTGTATTG TTATCATCTCTTTTT TERM 1129 1335005 - 1335015 + g 86 -2.6 -5.86332 | opp_overlap 1335005 GTCATTGTTTTCAAA TATT TTT AATA TTTTTTTTGACTTAA NAMH_1437 1337174 - 1335258 - | diguanylate cyclase/phosphodiesterase TERM 1130 1335827 - 1335817 - G 79 -5.4 -5.1615 | opp_overlap 1335817 GCAATATCCAAAAAA CTTC CCG GAAG ATATATATTTCCTTT TERM 1131 1336959 - 1336969 + g 72 -2.6 -5.24796 | ATCGATATTTGTTTT TTTA CTA TAAA TTTTTATTATATCAG TERM 1132 1336982 - 1336992 + g 83 -6.8 -4.98522 | opp_overlap 1336981 AAATTTTTATTATAT CAGC GAA GCTG TTTTTATATAACATT NAMH_1438 1340701 - 1337252 - | acriflavin resistance protein TERM 1133 1338337 - 1338370 + g 72 -4.8 -4.74453 | gap 1, opp_overlap 1338337 1338346 TGTCTCTCATAATAT CTATATCAACA-ACC CTGTC GGTATGTTTATATAG TTTTTCAATCTCTTC TERM 1134 1338680 - 1338694 + g 93 -7.2 -5.45802 | overlap 1338678 TCCGATAAACTGTTC GAAATC TTT GATTTC TTTTTCTTTTGCAAG TERM 1135 1339164 - 1339150 - G 74 -6.4 -4.29139 | opp_overlap 1339150, overlap 1339147 CGAAAGCTAAAATAA TCGCAA GTG TCGCGA TATTAGTAGGATTTC TERM 1136 1339446 - 1339432 - G 72 -5.8 -4.37527 | GCATAATTATTAAAA GTATTA CGA TAATAC CAAGAGATATCAACA TERM 1137 1339537 - 1339564 + g 74 -3.4 -5.28481 | opp_overlap 1339533, overlap 1339533 1339538 ATATATCAACATCTT TCGGAAGAGTTT TTTT AAGCTCTTCGGC TTTTTTAATTACGTC TERM 1138 1339538 - 1339563 + g 70 -6.9 -3.76004 | opp_overlap 1339533, overlap 1339533 1339537 TATATCAACATCTTT CGGAAGAGTTT TTTT AAGCTCTTCGG CTTTTTTAATTACGT TERM 1139 1340135 - 1340155 + g 87 -9.8 -4.01564 | opp_overlap 1340134 1340133 CGGTTTAACCAAAGG CTGCCAAA CACCT TTTGGCAG TTTGTCCATATTTTG NAMH_1439 1341747 - 1340710 - | secretion protein HlyD NAMH_1440 1343126 - 1341744 - | outer membrane efflux protein TERM 1140 1341983 - 1341965 - G 71 -6.6 -4.09685 | TTTTATTTTTTAAAA CCGCAGCC TTA GCCTGCAG ATCAAGATATTTCTG TERM 1141 1343717 - 1343739 + G 80 -9.4 -3.68795 | opp_overlap 1343722, overlap 1343722 1343730 AGGAATTTACGCATT TAAAATATTC GGT GAATATTTTA TTCCTTTAATTTTAA TERM 1142 1343722 - 1343734 + G 75 -4.9 -4.85545 | opp_overlap 1343722, overlap 1343717 1343730 TTTACGCATTTAAAA TATTC GGT GAATA TTTTATTCCTTTAAT TERM 1143 1344007 - 1344018 + G 70 -4.4 -4.7629 | CTCCTTCACTTTGGA TAGG AATT CCTA TTTTTACATTAGTCG TERM 1144 1344392 - 1344371 - g 71 -8.9 -3.07962 | opp_overlap 1344376, overlap 1344376 TGCGATAGTTCAATA TAAAACTGT AAAA ACAGTTTTA AAACTAAATAAAAAA TERM 1145 1344387 - 1344376 - g 70 -4.4 -4.67608 | opp_overlap 1344376, overlap 1344371 TAGTTCAATATAAAA CTGT AAAA ACAG TTTTAAAACTAAATA NAMH_1441 1343262 - 1344419 + | hypothetical protein typA 1346582 - 1344774 - | GTP-binding protein TypA TERM 1146 1344951 - 1344966 + g 83 -7.6 -4.82855 | overlap 1344961 GTCACTTCCGCTTGC CCTTAC GTTT GTAAGG TTTTTACCTTTAATA TERM 1147 1345324 - 1345334 + g 74 -5.4 -4.74103 | TTCATAATTCCGCCT CTTG TAC CAAG TTTTTCGATTACCGC TERM 1148 1345392 - 1345410 + g 71 -3 -5.02606 | CACTACGTATTCGTA CGGCTCTA ACT TAACGCCG TTTTCTTCTTTGATA TERM 1149 1347135 - 1347116 - g 91 -2.2 -6.31682 | AAAACGAAAAAAAAA TTCTTAAA TTAA TTGAAGAA AAAAAGCTTCCGGAA NAMH_1443 1346767 - 1348467 + | putative mcp-domain signal transduction protein TERM 1150 1348506 - 1348478 - f 72 -8.9 -2.63348 | opp_overlap 1348476, overlap 1348477 CTTAGGAACAGTAAT TGCTTGAGTCTTT AAA AAAGGCTCATGCA TGTCCATTGTAGAAA NAMH_1444 1348506 - 1349897 + | hypothetical protein NAMH_1445 1350161 - 1350832 + | flagellar hook capping protein TERM 1151 1352648 - 1352658 + G 77 -5.4 -4.84761 | opp_overlap 1352635 AACACCTTAGAAGCT TCCA ATG TGGA TTTTTCTCAGGCTAT NAMH_1446 1350848 - 1352776 + | flagellar basal body and hook protein TERM 1152 1352987 - 1352976 - g 70 -3.6 -4.84527 | opp_overlap 1352984 1352985, overlap 1352984 GCCAGACAGTAAAAA GCGC AACA GCAC CACAGGGTGATTTAG TERM 1153 1353740 - 1353720 - g 100 -9.1 -5.35365 | opp_overlap 1353725, overlap 1353722 1353730 AAAACAGAATAAAAA CAGAAGACA CTT TGTCTTCTA CAAACACTATATTAG TERM 1154 1353738 - 1353722 - g 89 -9.5 -4.26142 | opp_overlap 1353725, overlap 1353720 1353730 AACAGAATAAAAACA GAAGACA CTT TGTCTTC TACAAACACTATATT TERM 1155 1354247 - 1354234 - g 71 -6.7 -4.25074 | GATTAAATTCGAAAA CGGTA AAAT TACCG AAACAAATGATGTTA flgE 1352825 - 1355386 + | flagellar hook protein FlgE TERM 1156 1355431 - 1355387 - f 83 -8.2 -4.26559 | gap 1, overlap 1355384 1355395 CAATTAAAACAATAA TGATATAATTCGCTAAAAATC TTTT GATTTTTAGCGGAGTA-ATCA TGCAAAAACTCTTTG TERM 1157 1355424 - 1355395 - f 89 -10.9 -3.65434 | overlap 1355387 1355384 ACAATAATGATATAA TTCGCTAAAAATC TTTT GATTTTTAGCGGA GTAATCATGCAAAAA NAMH_1449 1355431 - 1357200 + | hypothetical protein NAMH_1448 1358433 - 1357186 - | diguanylate cyclase (ggdef) domain protein NAMH_1450 1360133 - 1358493 - | DNA polymerase X family/PHP domain protein TERM 1158 1358907 - 1358890 - G 83 -6.3 -4.87133 | opp_overlap 1358890 ATTGCGCAAACAAAA TCCGCTT TTTC AAGCAGA TCTTCTTTTGCTTCA TERM 1159 1360055 - 1360075 + g 70 -7 -3.76952 | TGTATGCCCTTACTT TAAAAGGA TTTTC TCCTTTTA TTTCCATTAAATCCG NAMH_1451 1360407 - 1360123 - | hypothetical protein NAMH_1453 1360474 - 1360899 + | hypothetical protein NAMH_1452 1362010 - 1360880 - | 3-deoxy-d-manno-octulosonic-acid transferase kdta TERM 1160 1361867 - 1361882 + g 70 -3.9 -4.96848 | AAACCAGTATCTTTT CTCGC AAAAAG GCGGG TTTTTATATAAAAAA NAMH_1454 1362738 - 1362013 - | hypothetical protein TERM 1161 1362504 - 1362519 + g 84 -6.2 -5.33026 | CTTTTGACTGTTTTT CTTCAA TGTT TTGAAG TTTTTCTTTAAGTTC NAMH_1455 1363584 - 1362865 - | hypothetical protein NAMH_1456 1364809 - 1363586 - | hypothetical protein TERM 1162 1364609 - 1364623 + g 74 -2.2 -5.4588 | opp_overlap 1364611, overlap 1364611 TAGTTTTGCTTCTAA TATATT GTC AATATG TTTTTTCTGCTTTTG glyQ 1365668 - 1364826 - | glycyl-tRNA synthetase, alpha subunit TERM 1163 1365453 - 1365468 + g 76 -6.8 -4.46757 | opp_overlap 1365452, overlap 1365465 AAACTGATAATAACT CCCGAG TCTG TTCGGG TTTTCTCCGTATCTT NAMH_1458 1366535 - 1365678 - | protein of unknown function DUF89 NAMH_1459 1366771 - 1366532 - | glutaredoxin NAMH_1460 1367239 - 1366781 - | hypothetical protein TERM 1164 1366873 - 1366886 + g 70 -8.1 -3.22909 | overlap 1366872 TTTGACATATCTCAA GCTGC TTTT GCAGC CTTTTAATGGTTTCC TERM 1165 1366956 - 1366936 - G 75 -6.9 -4.2528 | opp_overlap 1366937, overlap 1366937 CCTGAATGGAATAAA TCGAGTTTT TCA AAAACTCGT TTTCTTCTTTAAGAG TERM 1166 1366955 - 1366937 - G 80 -10.4 -3.14686 | opp_overlap 1366937, overlap 1366936 CTGAATGGAATAAAT CGAGTTTT TCA AAAACTCG TTTTCTTCTTTAAGA TERM 1167 1366937 - 1366955 + g 100 -10.4 -5.00196 | opp_overlap 1366937 1366936 CTGAATGGAATAAAT CGAGTTTT TCA AAAACTCG TTTTCTTCTTTAAGA purE 1367736 - 1367239 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 1168 1367668 - 1367652 - G 72 -8.1 -3.45118 | opp_overlap 1367651 1367640 TCAGCTCATAAGGAA TTTGGAA TTT TTCCAAA ATCTTAACAGCTTCT NAMH_1462 1369032 - 1367746 - | peptidase, U32 family TERM 1169 1367798 - 1367788 - G 71 -5.4 -4.56597 | overlap 1367789 TTTTTTTCTTAAAAA CGTA AGA TACG GCAACTTACAAGGTA TERM 1170 1368871 - 1368889 + g 72 -6 -4.3534 | TCTTTCATGTGCGTA TTTTACCG CTT CGGCAAAA TTTTCATAATTAAAC NAMH_1463 1369692 - 1369033 - | hypothetical protein NAMH_1464 1369747 - 1370523 + | histidinol phosphatase NAMH_1465 1370533 - 1371777 + | major facilitator superfamily MFS_1 flgI 1371885 - 1372880 + | flagellar P-ring protein FlgI NAMH_1467 1372891 - 1373166 + | hypothetical protein NAMH_1468 1373224 - 1373403 + | hypothetical protein TERM 1171 1373633 - 1373599 - g 71 -6.7 -4.1466 | opp_overlap 1373606 AGTGAATTTGCAAAA CTTAAAACTGAAATT GATAA AATTTTAGTTTCAAG AAACAAGCCTTTAGA NAMH_1469 1373446 - 1373856 + | hypothetical protein flgK 1373858 - 1376041 + | flagellar hook-associated protein FlgK TERM 1172 1376042 - 1376065 + T 74 -6.1 -4.39407 | opp_overlap 1376042 AGTATAAAACAGTAA GAAGGGTTA TTTGTT TAACTCTTC TTTTAAATTATTTAA NAMH_1471 1376623 - 1376048 - | hypothetical protein TERM 1173 1377044 - 1377032 - g 82 -3.5 -5.5943 | AAATTATTAAAAAAA TTTAT GCA ATAAA CCCATACACCTCACA NAMH_1472 1376665 - 1377390 + | hypothetical protein atpB 1377697 - 1378380 + | ATP synthase F0, A subunit TERM 1174 1378392 - 1378426 + F 89 -11.7 -3.0119 | gap 1 TTAATCGGAACACCT TTTGC-TTAGGCTCCT AAAA AGGAGTCTAATGCAAA TCTCTCATATTAACT TERM 1175 1378631 - 1378619 - g 77 -5.5 -4.88711 | overlap 1378620 ATAATATATTAAAAA CCCTG CAA CAGGA AAAAGAGTATAAAAA NAMH_1474 1378420 - 1378671 + | hypothetical protein NAMH_1476 1378664 - 1379185 + | thiamine monophosphate synthase NAMH_1475 1380005 - 1379178 - | prephenate dehydrogenase TERM 1176 1379298 - 1379313 + g 75 -4.8 -4.87803 | AGCTTCTATTGAATC TAAAAG ATTG CTTTTA TTTTCTTTAAAGATA TERM 1177 1379461 - 1379449 - G 70 -4.1 -4.67353 | overlap 1379450 TTAGCTATTGAAAAA CTCAC TAT ATGAG GCATATGTGAAATAA TERM 1178 1381301 - 1381284 - g 76 -6.3 -4.63184 | gap 1, opp_overlap 1381285 1381286, overlap 1381285 1381286 AACCGACTCTAAAAA CGCGCTTC AAA GAAGCG-G TTACTTGGAAGATGT TERM 1179 1381300 - 1381286 - g 75 -10 -2.61831 | opp_overlap 1381285 1381286, overlap 1381284 1381285 CCGACTCTAAAAACG CGCTTC AAA GAAGCG GTTACTTGGAAGATG TERM 1180 1381286 - 1381300 + G 75 -10 -2.60392 | opp_overlap 1381286 1381284 1381285, overlap 1381285 CCGACTCTAAAAACG CGCTTC AAA GAAGCG GTTACTTGGAAGATG NAMH_1477 1380166 - 1382343 + | outer membrane protein, OMP85 family lnt 1383589 - 1382420 - | apolipoprotein N-acyltransferase TERM 1181 1383195 - 1383182 - G 70 -3.9 -4.93968 | opp_overlap 1383187 1383190, overlap 1383187 AGTTATAACTAAAAA CAAAA CAAT TTTTG AAACATCGAAAATTG TERM 1182 1383210 - 1383187 - G 82 -5.4 -5.34655 | opp_overlap 1383187 1383190, overlap 1383182 1383208 TAACTAAAAACAAAA CAATTTTTGA AACA TCGAAAATTG TATTCACAAACAAAA TERM 1183 1383487 - 1383476 - G 70 -2.2 -5.27923 | TAATCCTATAAAAAA TCCG CTAC CGAA CCATTTGTGTTTTGA yajC 1383676 - 1383984 + | preprotein translocase, YajC subunit TERM 1184 1384022 - 1384041 + G 81 -7.9 -4.30995 | TTAGCAGCACTTTTC GGGATTG CTTTTA CAATCCC TTCTTTTATCAACAA TERM 1185 1385519 - 1385496 - g 77 -3.2 -5.43866 | overlap 1385499 1385501 CAAGCGGTAAAAAAA TTACACCAAA ATCT TTTGGTATGA AGGTTTAGTATGGAA secD 1383971 - 1385527 + | protein-export membrane protein SecD secF 1385529 - 1386500 + | protein-export membrane protein SecF TERM 1186 1386520 - 1386556 + F 74 -6.1 -4.35926 | opp_overlap 1386520, overlap 1386520 TGGACAATTCAACAA TGGAAAATGTAAAGTTT TTA AAATTTTCCATTTTACA TTTTCAATTTAACAT NAMH_1482 1386584 - 1386925 + | hypothetical protein TERM 1187 1389265 - 1389254 - g 72 -5.8 -4.36993 | overlap 1389261 AACGGTAAAAAAAGA GCTG AAAT CAGC GTAAGCGCTGACGCA TERM 1188 1389276 - 1389261 - g 79 -9 -3.74198 | overlap 1389254 AAAAAAGAGCTGAAA TCAGCG TAAG CGCTGA CGCAGGCAAAGACGA leuS 1386941 - 1389400 + | leucyl-tRNA synthetase NAMH_1484 1389403 - 1389939 + | putative lipoprotein NAMH_1485 1389929 - 1391467 + | diguanylate cyclase NAMH_1486 1391485 - 1392669 + | folylpolyglutamate synthetase TERM 1189 1393682 - 1393669 - g 74 -2.3 -5.42458 | AAGAAAAAAAACAAA CCTCG TTCT CGATG AAATCAAAAAAGGCG TERM 1190 1393795 - 1393751 - g 100 -9.3 -5.01732 | AACGGTCTTAAAAAA GTAGAAATCCTCGGCAAAGTC GGA GAATACGCCGAAGTTCTCTAC GCCAACGACGATAAA TERM 1191 1395430 - 1395420 - g 80 -2.6 -5.75538 | overlap 1395426 TCGAAAAAATAAAAA TAAA GGT TTTA GCTTCCCAAAAAGGC mfd 1392650 - 1395574 + | transcription-repair coupling factor TERM 1192 1395810 - 1395830 + T 72 -3.4 -5.30575 | TGTTTTATTCAATGG TAGTTTAT TGATT ATGAACTA TTTTTTCAATTTTTA NAMH_1489 1397295 - 1395814 - | DNA polymerase III, subunits gamma and tau NAMH_1490 1397606 - 1397310 - | putative replication protein TERM 1193 1398217 - 1398238 + G 73 -8.1 -3.62046 | opp_overlap 1398207, overlap 1398220 GTATATCCAAACGCT CAGCTTTGT GGAG ACAAAGTTG TTCTTAGAAAAATGA NAMH_1492 1398028 - 1399017 + | c4-dicarboxylate-binding periplasmic protein TERM 1194 1399097 - 1399066 - g 72 -9.4 -2.6342 | gap 1, opp_overlap 1399068 1399070, overlap 1399063 TGCTAAATGAATTTA TAGC-CTCCTTCGGC ATA GCCGCAGGAGTGCTT TTGGCTTTTATAAAC TERM 1195 1399068 - 1399095 + G 100 -12 -4.4595 | gap 1, opp_overlap 1399066 1399063, overlap 1399070 CTAAATGAATTTATA GC-CTCCTTCGGC ATA GCCGCAGGAGTGC TTTTGGCTTTTATAA TERM 1196 1399070 - 1399092 + G 93 -13.4 -3.17699 | opp_overlap 1399066 1399063, overlap 1399068 AAATGAATTTATAGC CTCCTTCGGC ATA GCCGCAGGAG TGCTTTTGGCTTTTA NAMH_1493 1399014 - 1399583 + | small integral c4-dicarboxylate membrane transport protein,putative TERM 1197 1399596 - 1399606 + G 76 -2.6 -5.4111 | TGATAGTTGGTGTAT TATT CGG AATA TTTTTTCTGCTTCTT NAMH_1494 1399580 - 1400866 + | C4-dicarboxylate transport system permease, large subunit TERM 1198 1400933 - 1400921 - f 72 -3.5 -5.20154 | opp_overlap 1400921 ATATAATGTAAAAAA TTAAT TAA ATTAA TTCATATAAGTTTAG groS 1401058 - 1401330 + | chaperonin GroS TERM 1199 1402454 - 1402436 - g 73 -3.9 -5.05601 | TACGACAGAGAAAAA TTACAAG AAAGA CTTGCAA AATTAAGCGGAGGTG groL 1401341 - 1402978 + | chaperonin GroL TERM 1200 1403016 - 1403003 - T 71 -8.1 -3.31601 | opp_overlap 1403002 1403003, overlap 1403002 1402993 CAAAAGCCACAAAAT CCCGA TTTT TCGGG CTTTTTAGCCCACTA TERM 1201 1403003 - 1403016 + T 71 -8.1 -3.3422 | opp_overlap 1403003 1403002 1402993, overlap 1403002 CAAAAGCCACAAAAT CCCGA TTTT TCGGG CTTTTTAGCCCACTA NAMH_1497 1403488 - 1403123 - | hypothetical protein NAMH_1498 1403718 - 1403485 - | hypothetical protein NAMH_1499 1404776 - 1403715 - | hypothetical protein TERM 1202 1404624 - 1404641 + g 84 -5.7 -5.48514 | GTTATATTTTTCTGC CAAATAA TTAA TTATTTG TTTTTGTTTATTAAT NAMH_1500 1406341 - 1404989 - | mobilization protein TERM 1203 1405489 - 1405506 + g 71 -5.7 -4.4891 | TAGCGTTTAAGGATT TTTTAAG ATTA CTTAAAA TTTTATAATCCTCCG TERM 1204 1406420 - 1406391 - R 100 -10.7 -5.1356 | overlap 1406400 1406402 CGCGAGGAATAAAAA CTCACGCAACACC GTAA GGTGTGGAGTGAG GCCTCACTCCACACC TERM 1205 1406443 - 1406400 - R 100 -14.6 -3.14261 | overlap 1406391 1406402 TAAAAACTCACGCAA CACCGTAAGGTGTGGAGTGA GGCC TCACTCCACACCTGCCAGGG CAGATGTGAGTGAGC TERM 1206 1406441 - 1406402 - R 100 -15.8 -3.11966 | overlap 1406391 1406400 AAAACTCACGCAACA CCGTAAGGTGTGGAGTGA GGCC TCACTCCACACCTGCCAG GGCAGATGTGAGTGA NAMH_1501 1406622 - 1406473 - | hypothetical protein TERM 1207 1406712 - 1406722 + r 72 -2.6 -5.35224 | AAAATTAAAAGGGGA TAAA GTC TTTA TTTTCTTTTTCTAAC NAMH_1502 1407078 - 1406701 - | hypothetical protein NAMH_1503 1407320 - 1407081 - | serine/threonine kinase TERM 1208 1407334 - 1407346 + r 84 -3.3 -5.84011 | ATTTGTAAATTCCTT TCCCG TTC CCGGA TTTTTGTTTTTTATT TERM 1209 1407400 - 1407415 + r 91 -3.4 -6.25741 | opp_overlap 1407393, overlap 1407393 TATTCAAATACTTAT TTATAA GTAT TTATAA TTTTTTTTATTATTT NAMH_1504 1408193 - 1407456 - | hypothetical protein NAMH_1505 1409979 - 1408183 - | hypothetical protein TERM 1210 1408746 - 1408762 + g 70 -3.8 -4.88228 | TAAAAAACGCATTAT CAATAT TATAT ATATTG TTTTTAATATTAACT NAMH_1506 1410148 - 1409981 - | hypothetical protein TERM 1211 1410291 - 1410261 - R 71 -8.3 -3.31817 | overlap 1410279 AAGTAGCAAACTGAA TCCGCCGGC TTTTTAAAATTCC GCCGGCGGA GGTTACGGGAAAGCT TERM 1212 1410425 - 1410410 - R 80 -10.4 -2.73441 | opp_overlap 1410400, overlap 1410409 CACGACCTCGCAAAC CCCCGT AAAT ACGGGG TTGCAGGATTGTTGA NAMH_1507 1412905 - 1411136 - | phage integrase family protein TERM 1213 1413080 - 1413109 + r 100 -9.5 -4.81644 | gap 1, opp_overlap 1413074, overlap 1413086 AAAACTCAACCCTTC GGAATGGGAATGAT GTA ATCATTCCT-TTCC TTTTCATTTTATTTA TERM 1214 1413086 - 1413104 + r 95 -10.4 -4.30827 | opp_overlap 1413074, overlap 1413080 CAACCCTTCGGAATG GGAATGAT GTA ATCATTCC TTTCCTTTTCATTTT TERM 1215 1413311 - 1413325 + r 93 -8.6 -4.87133 | TAGACCGCAGGTGAT TAGTGC CAG GCACTA TTTTGTTTGAAAAAT rplS 1413712 - 1413356 - | ribosomal protein L19 TERM 1216 1414111 - 1414158 + G 74 -2.2 -5.52384 | gap 1, overlap 1414116 CTTCGAGCTTGCCTC CCACATAAAAAAAACACATCCTG ACA CAGT-TGTGATTTTTTTATCTGC TTTTTTTGATACGGA TERM 1217 1414551 - 1414537 - g 76 -2.8 -5.5112 | GGGATTAATAAAAAA CCGT AAAAAAA ACGG TGAGGCTTATTATGT NAMH_1510 1413884 - 1415851 + | diguanylate cyclase/phosphodiesterase trmD 1416486 - 1415827 - | tRNA (guanine-N1)-methyltransferase TERM 1218 1415927 - 1415937 + g 84 -5.4 -5.41143 | opp_overlap 1415927 CTTTTTAAAATATCA GGTA CTT TACC TTTTTTTGAAAACTG rimM 1417004 - 1416483 - | 16S rRNA processing protein RimM TERM 1219 1416830 - 1416859 + g 73 -3.7 -5.1101 | opp_overlap 1416834, overlap 1416834 GTGTATCAATACCTT TAAACTTAACAAG TCCT CTTTTTAAGTCTA TTTTTTCAATAGTGA TERM 1220 1417020 - 1417030 + r 75 -2.6 -5.67711 | CTTCAGTTTTCACCG TTAT TTT ATAA TTTTTATTTTCTTTG NAMH_1512 1417239 - 1416997 - | hypothetical protein rpsP 1417484 - 1417239 - | ribosomal protein S16 ffh 1418909 - 1417560 - | signal recognition particle protein TERM 1221 1418284 - 1418298 + g 79 -5.7 -5.1166 | ACGTAAAATATTTCA TGAGG ATTAA CCTCA TTTTTAATTTTAATA NAMH_1515 1419684 - 1418923 - | ribosomal pseudouridine synthase NAMH_1516 1419890 - 1420234 + | hypothetical protein TERM 1222 1420448 - 1420434 - g 70 -3.6 -4.8667 | GACACTTTACAAAAA CAAATC AAT GATTTA CAACAACAATTAAAA NAMH_1517 1420359 - 1421870 + | hypothetical protein TERM 1223 1421885 - 1421919 + F 84 -2.3 -6.17184 | gap 1, opp_overlap 1421893 1421896, overlap 1421893 ATAATTAACATAAAT TTAACTTATAAGTGCC TCCC GGCACTTATTT-TTAA TTTTTTTTTGATACT TERM 1224 1421893 - 1421912 + F 100 -10.8 -5.34208 | opp_overlap 1421893 1421896, overlap 1421885 CATAAATTTAACTTA TAAGTGCC TCCC GGCACTTA TTTTTAATTTTTTTT TERM 1225 1421912 - 1421893 - f 82 -10.8 -2.59526 | opp_overlap 1421893 1421885, overlap 1421896 CATAAATTTAACTTA TAAGTGCC TCCC GGCACTTA TTTTTAATTTTTTTT TERM 1226 1421909 - 1421896 - f 73 -8.1 -3.43965 | opp_overlap 1421893 1421885, overlap 1421893 AAATTTAACTTATAA GTGCC TCCC GGCAC TTATTTTTAATTTTT TERM 1227 1423888 - 1423878 - g 71 -3.2 -5.14563 | CGGCTTATGAAAAAA CTCC TGA AGAG TTCAACGAAGAAGTA TERM 1228 1424181 - 1424164 - g 73 -4.1 -4.95854 | overlap 1424165 TAAAAAATTCAAAAA CCCTATC AACG GACAGGA AGAAACACTTCATAA NAMH_1518 1421966 - 1424620 + | putative polysulfide reductase chain A NAMH_1519 1424624 - 1425292 + | molybdopterin oxidoreductase, iron-sulfur binding subunit NAMH_1520 1425302 - 1426603 + | polysulphide reductase, NrfD family TERM 1229 1426609 - 1426622 + F 93 -8.1 -5.28176 | AGATCACTAATCTCC TGCCC TTTT GGGCA TTTTTTATCACTCAC trx 1426862 - 1427182 + | thioredoxin NAMH_1522 1427231 - 1427614 + | hypothetical protein TERM 1230 1427611 - 1427651 + F 80 -9.4 -3.53012 | opp_overlap 1427611, overlap 1427602 TGAAGTTATTGAAAA TTAATATTGATAAAAAGA AAAAA TCTCTTTATCAATGTTAA TTTAAGGAGCAAAAA TERM 1231 1427651 - 1427611 - f 90 -9.4 -4.21275 | opp_overlap 1427602 1427611 TGAAGTTATTGAAAA TTAATATTGATAAAAAGA AAAAA TCTCTTTATCAATGTTAA TTTAAGGAGCAAAAA TERM 1232 1428178 - 1428164 - g 73 -3.6 -5.15381 | overlap 1428169 AATATAGCCAAAAAA GTATAT CTG ATACAC AGACGTAATGAATTC trxB 1427666 - 1428577 + | thioredoxin-disulfide reductase dapB 1428579 - 1429340 + | dihydrodipicolinate reductase TERM 1233 1429499 - 1429487 - g 79 -5.5 -5.10064 | GCGAACATATAAAAA CCGTC AAA GACAG AGGCCTTGTAACTCA TERM 1234 1430065 - 1430080 + G 72 -4.8 -4.64861 | opp_overlap 1430065 CCGACTCCGAAACAG TGTATT TTCG AATACA TTTATTTTGCAAGAC purF 1429357 - 1430694 + | amidophosphoribosyltransferase TERM 1235 1430687 - 1430699 + F 72 -2.7 -5.41787 | overlap 1430695 ACGACAATTACCCTA TTCTT TAA GAGAA TTTTTCTCTTTTTTC TERM 1236 1430695 - 1430707 + F 93 -6.3 -5.5604 | overlap 1430687 TACCCTATTCTTTAA GAGAA TTT TTCTC TTTTTTCTTGATTAA NAMH_1526 1430763 - 1431704 + | radical SAM protein, family NAMH_1528 1431719 - 1432303 + | S-adenosylmethionine-dependent methyltransferase NAMH_1527 1433264 - 1432293 - | ggdef domain protein NAMH_1529 1433868 - 1433287 - | metallo-beta-lactamase family protein TERM 1237 1434442 - 1434453 + r 72 -5.8 -4.43501 | opp_overlap 1434442 GCCACTTCAAGAGAA TGCG CGAG CGCA TTTTGTCCGTAACTT NAMH_1531 1435978 - 1435364 - | 5,10-methenyltetrahydrofolate synthetase TERM 1238 1436349 - 1436339 - g 76 -2.6 -5.40474 | ATGGTTCTAAAAAAA TTAA ACA TTAA ATACTATAAAACAAA NAMH_1532 1436075 - 1436491 + | putative lipoprotein TERM 1239 1436945 - 1436930 - g 77 -6.1 -4.69326 | ATAGTGAAGACAAAA CAGGG ACACGA CCCTG CAGCCGTAACATACG ftsY 1436492 - 1437361 + | signal recognition particle-docking protein FtsY TERM 1240 1438433 - 1438417 - g 100 -12.3 -5.14563 | overlap 1438399 TTTTTCAGCAAAAAA GCACTCC CTG GGAGTGC AATCACAGTTGTTTT TERM 1241 1438659 - 1438641 - g 74 -5.2 -4.78077 | opp_overlap 1438645 CGGAATTAAAATAAA CGAACCCG CAG CGGATTTG GCAGTAATAGCGGCT radA 1437592 - 1438896 + | DNA repair protein RadA NAMH_1534 1439259 - 1438879 - | hypothetical protein NAMH_1536 1440107 - 1439205 - | peptidase, M23/M37 family NAMH_1537 1440926 - 1440111 - | DnaJ domain protein TERM 1242 1440160 - 1440173 + g 73 -3.9 -5.05782 | AATTCGAAAGATTCT TTTAC TCTT GTAAA TTTTTTAGCATAAAT TERM 1243 1440769 - 1440787 + g 74 -6.2 -4.51699 | TTATGTTTTCTTATG TTTTTTTT GTC AAAAAAAA TTTTATACTGATTAT TERM 1244 1440850 - 1440830 - G 70 -4.1 -4.72007 | GCTTATTAAAAGAAA GTCTTATAA ACT CTATAAAAC CTTTGATTTTAAATC NAMH_1538 1441641 - 1440916 - | methlytransferase ribD 1442620 - 1441643 - | riboflavin biosynthesis protein RibD TERM 1245 1442467 - 1442479 + g 84 -6.2 -5.24129 | opp_overlap 1442450 CATGCACCTCCGCAT GCGG CTCAC CCGC TTTTTTATGAACACC NAMH_1540 1443081 - 1442635 - | hypothetical protein NAMH_1541 1444130 - 1443318 - | hypothetical protein rbfA 1444474 - 1444127 - | ribosome-binding factor A infB 1446924 - 1444477 - | translation initiation factor IF-2 TERM 1246 1446637 - 1446653 + g 79 -3.7 -5.40474 | CGCTTTTTTAACTAC CTCAATA CCT TTTTGAG TTTTTTTAACCAAAT TERM 1247 1446695 - 1446705 + g 77 -3.2 -5.4593 | CCACGAGAGCGTCTT CTTC TTT GAGG TTTTTCTTCTTTTAC NAMH_1544 1447189 - 1446938 - | hypothetical protein thrB 1448094 - 1447213 - | homoserine kinase NAMH_1546 1448561 - 1448106 - | hypothetical protein TERM 1248 1448298 - 1448308 + g 86 -2.6 -5.77853 | AAACCCGTCCGCCGC TAAA AGT TTTA TTTTTTTTGCCACTT TERM 1249 1448434 - 1448462 + g 73 -4.6 -4.95854 | opp_overlap 1448434 1448437 ATTTCATCGAAGAGA GAAGGTAAAACA TCGCT TGTCATACCTTC TTTTTCAATTTTTTC lpxC 1449420 - 1448542 - | UDP-3-0-acyl N-acetylglucosamine deacetylase NAMH_1548 1449944 - 1449417 - | hypothetical protein NAMH_1549 1451269 - 1449941 - | peptidase M23B NAMH_1550 1452269 - 1451322 - | MgpA protein TERM 1250 1452426 - 1452405 - R 73 -8.9 -2.87136 | TTAGTAATTAGTATA TTAGTAGAT AATT ATCTACTAA TCAGGGTCTGGCACT flhB 1453558 - 1452503 - | flagellar biosynthetic protein FlhB NAMH_1552 1454859 - 1453558 - | cationic amino acid transporter bioD 1454927 - 1455547 + | dethiobiotin synthase NAMH_1554 1455548 - 1455943 + | thioesterase superfamily TERM 1251 1455936 - 1455956 + T 95 -4.1 -6.17268 | opp_overlap 1455936 AACATGTTTTAAAAA GAAAATAAT CAC ATTTTTTTC TTTTTTTTATTATAC TERM 1252 1456083 - 1456065 - T 100 -10.4 -5.48028 | opp_overlap 1456068 TAAATAAAAACAAAA GAAGAAGA TTA TCTTCTTC TGCCTCTTCCAGAGT NAMH_1555 1457476 - 1456073 - | ATP-dependent RNA helicase DeaD TERM 1253 1456327 - 1456344 + g 77 -4.9 -5.13521 | CAATAGATTTTGTGT TAGGTTC AATT GAACTTA TTTTTTCCATAATTT NAMH_1556 1458132 - 1457581 - | hypothetical protein TERM 1254 1457772 - 1457753 - G 73 -7.2 -3.91506 | opp_overlap 1457770, overlap 1457751 1457754 TTACTTCCAAAAATA CTCAAACC TCCC GGTTTGAA GAAGCTTCCTTTTGT hisIE 1458788 - 1458129 - | histidine biosynthesis bifunctional protein hisIE TERM 1255 1458258 - 1458246 - G 70 -6.9 -3.80516 | opp_overlap 1458224, overlap 1458224 AATTAATGTATGAAA GGCCA AAT CGGCC GCTTCATATATAATT TERM 1256 1458752 - 1458768 + g 83 -2.2 -5.79526 | opp_overlap 1458752 CATCCTGTACAATAA CGGG AACAAGACC CCCG TTTTTTTTAAAATCT NAMH_1558 1459867 - 1458797 - | spfh domain protein TERM 1257 1459912 - 1459899 - R 72 -2.4 -5.50925 | opp_overlap 1459890 1459901 1459911, overlap 1459890 1459901 AATTAAGAGAAAAAA TCTC TCATTT GAGA TTTTATAATCTTTAT ilvE 1460843 - 1459929 - | branched-chain amino acid aminotransferase NAMH_1561 1460932 - 1462350 + | aldehyde dehydrogenase NAMH_1560 1462538 - 1462347 - | hypothetical protein NAMH_1562 1462835 - 1462539 - | hypothetical protein TERM 1258 1462793 - 1462781 - G 74 -6.3 -4.4078 | overlap 1462784 CCCCGTCAACTAAAA TATCC GCC GGATA ATCGGCAAGCTCTCC NAMH_1563 1464136 - 1462988 - | FAD-dependent oxidoreductase NAMH_1564 1464848 - 1464231 - | hypothetical protein TERM 1259 1464380 - 1464391 + g 74 -2.2 -5.4756 | CGGGCAGGTAGCTTC TTGC AAGT GCGA TTTTTTCTTCCACTT NAMH_1565 1465692 - 1464886 - | putative lipoprotein TERM 1260 1464951 - 1464961 + g 95 -2.6 -6.4275 | overlap 1464943 AGCCCTCTAAAATCT TATA TTT TATA TTTTTTTTATTTTTA NAMH_1566 1468905 - 1465693 - | putative outer membrane autotransporter barrel domain protein TERM 1261 1468464 - 1468483 + g 72 -9.3 -2.74696 | overlap 1468463 1468466 CGTAGCCCACTTCGA TACCGCG TAAACC CGCGGTA ATATTTCCTTCATTG TERM 1262 1469113 - 1469126 + G 79 -4.5 -5.24799 | opp_overlap 1469113 AGTAAAGATATTAAA CTGCT TTTT AGCGG TTTTTCTATTTCTCC TERM 1263 1470025 - 1470015 - g 76 -4 -5.22289 | opp_overlap 1470015 GATTAAAGATAAAAA CATA TCT TATG AGGAAATGTCCTATT NAMH_1568 1469077 - 1470132 + | transcriptional regulator TERM 1264 1470407 - 1470425 + G 79 -5.2 -5.17576 | GCTGATGGTAAATCT GGAGACGG AAG CGGTCTTC TTTTTTCACTTCCTA TERM 1265 1470801 - 1470786 - g 77 -3.2 -5.42259 | opp_overlap 1470788, overlap 1470788 1470797 TCAGCTCTAAAAAAA TAGCCT ACAA AGGCTT ATTGATGCCGAATCA TERM 1266 1470799 - 1470788 - g 72 -5.8 -4.35085 | opp_overlap 1470788, overlap 1470786 1470797 AGCTCTAAAAAAATA GCCT ACAA AGGC TTATTGATGCCGAAT TERM 1267 1472137 - 1472121 - g 76 -6.5 -4.59207 | overlap 1472124 ATAAAGATCATAAAA CAATGCC GAT GGCAATG GTGATAGGAAGACTT TERM 1268 1472134 - 1472124 - g 74 -6.8 -4.37552 | overlap 1472121 AAGATCATAAAACAA TGCC GAT GGCA ATGGTGATAGGAAGA NAMH_1569 1470257 - 1474633 + | glutamate synthase [NADPH] large chain TERM 1269 1474658 - 1474635 - f 100 -11.8 -3.7829 | ACGATATGGATTAAA GGAAGGCTAT GAAA ATAGCCCTCC ACGTTCCGTGTTACA NAMH_1570 1474643 - 1475347 + | GlpC protein NAMH_1571 1475334 - 1476635 + | electron transport protein TERM 1270 1476861 - 1476851 - g 84 -5.4 -5.51165 | overlap 1476854 AAAATGCCAAAAAAA GTAG TGC CTAC AATGCACGAAGCGGT NAMH_1572 1476659 - 1476994 + | YkgG family protein NAMH_1573 1477044 - 1477310 + | NifU family protein TERM 1271 1477343 - 1477360 + G 74 -5.5 -4.8066 | overlap 1477346 ATGATATTTTATATT GTATCCG CTAT CGGATTC TTTTTCCCTTATGTT TERM 1272 1477346 - 1477357 + G 74 -5.8 -4.48792 | overlap 1477343 ATATTTTATATTGTA TCCG CTAT CGGA TTCTTTTTCCCTTAT NAMH_1574 1477319 - 1477768 + | hypothetical protein NAMH_1575 1477765 - 1478739 + | geranylgeranyl hydrogenase NAMH_1577 1478766 - 1479584 + | cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) NAMH_1576 1480722 - 1479571 - | membrane-bound lytic murein transglycosylase C TERM 1273 1480816 - 1480802 - R 73 -4.4 -5.07652 | CCCGTTAAAATAAAA TATATA CAT TATATA AGCTAAGTGACAGAC NAMH_1579 1481451 - 1480966 - | putative ATP-dependent Lon protease TERM 1274 1481396 - 1481376 - G 82 -7.6 -4.61231 | opp_overlap 1481376 GGACAGTTGCAAAAA GAGCCAAA GAGCG TTTGGCCC TTATTCTTGGAATCA argJ 1482635 - 1481451 - | arginine biosynthesis bifunctional protein ArgJ NAMH_1581 1483845 - 1482697 - | TrkA TERM 1275 1483231 - 1483242 + g 70 -2.2 -5.26875 | AACGCCTCTTGCACT GCTT AAAA AGGC TTTTTTAATTGCAAG rpmB 1484052 - 1483867 - | ribosomal protein L28 NAMH_1583 1485317 - 1484154 - | tetrahydrodipicolinate N-succinyltransferase TERM 1276 1485065 - 1485047 - G 73 -9 -3.28712 | opp_overlap 1485037 CTGCTTCTTCCACAA GATCTTTT CCG AAAAGATC CAAAGCCGTTTCCAC NAMH_1584 1487398 - 1485350 - | diguanylate cyclase/phosphodiesterase TERM 1277 1485422 - 1485434 + g 76 -7.7 -4.08216 | TGTTTTTAAATACTC CAAGG TTT CCTTG TTTTCAACAAACTCC TERM 1278 1485743 - 1485763 + g 80 -7 -4.59027 | TTCACTGAAATTTGA GAGTTTAT CAATA ATAAACTC TTTTATATAATCATT TERM 1279 1487354 - 1487381 + g 95 -8.6 -5.31158 | opp_overlap 1487360 AATCAGTCCTACTCC TGAGAAGATAAA AGAT TTTATCATCTCA TTTTTAATTTTTTTC glmS 1489180 - 1487408 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing galU 1489992 - 1489180 - | UTP-glucose-1-phosphate uridylyltransferase NAMH_1587 1491602 - 1489992 - | sodium/hydrogen exchanger family protein NAMH_1588 1491981 - 1491595 - | hypothetical protein NAMH_1589 1492765 - 1492004 - | ribosomal large subunit pseudouridine synthase B NAMH_1590 1493805 - 1492861 - | carbohydrate isomerase, KpsF/GutQ family TERM 1280 1492905 - 1492918 + g 83 -8.1 -4.30978 | opp_overlap 1492905 1492904 1492902 GGATATGTATAACAC CGGCA ATAT TGCCG TTTTCGTCCGTTACA TERM 1281 1493621 - 1493609 - G 75 -4.7 -4.89063 | opp_overlap 1493609, overlap 1493605 GGATGTAAAAAGAAA CTGGG AGT CCCGG TACTTGCCAATGTTG TERM 1282 1494075 - 1494093 + G 71 -7.4 -3.70751 | CCATTACCTCTAACT GCTGAGCA GAC TGCTGAGC TTGTTGAACTTCTTA TERM 1283 1494678 - 1494667 - g 86 -5.8 -5.46629 | AAGAGCTTAAAAAAA CAGG TCAC CCTG TAGCGTTCGTAGGTG TERM 1284 1495060 - 1495044 - g 80 -5.1 -5.29385 | opp_overlap 1495044, overlap 1495045 AACCTAACTAAAAAA GCAAGAG AAT CTCTTGG CTTAAATCCTGATAC TERM 1285 1495059 - 1495045 - g 79 -8.6 -3.76004 | opp_overlap 1495044, overlap 1495044 ACCTAACTAAAAAAG CAAGAG AAT CTCTTG GCTTAAATCCTGATA acnB 1494000 - 1496594 + | aconitate hydratase 2 TERM 1286 1496925 - 1496954 + T 80 -7.3 -4.56736 | gap 1, opp_overlap 1496931 1496932, overlap 1496925 1496926 1496928 1496932 TAAAACAAAAGATCT G-CATAACTCCCTT TTT AAGGGAATTATGAC TTTTAATTATTACAT TERM 1287 1496926 - 1496952 + T 82 -11 -2.59051 | opp_overlap 1496931 1496932, overlap 1496925 1496925 1496928 1496932 AAAACAAAAGATCTG CATAACTCCCTT TTT AAGGGAATTATG ACTTTTAATTATTAC NAMH_1592 1497683 - 1496964 - | YheB TERM 1288 1497171 - 1497183 + g 80 -6.3 -4.79826 | opp_overlap 1497171 CTCATCTTCGAGAAA CGAAA CTA TTTCG TTTTTGATAATGTCT NAMH_1593 1498021 - 1497680 - | arsenate reductase NAMH_1594 1498389 - 1498018 - | hypothetical protein NAMH_1595 1499468 - 1498452 - | N-acetylneuraminic acid synthetase TERM 1289 1499410 - 1499423 + g 70 -8.1 -3.22668 | overlap 1499408 CTGCCTGCATGATTT GCGGA AAGC TCCGC TATTATAAAAACTTT NAMH_1596 1499995 - 1499468 - | hypothetical protein TERM 1290 1499929 - 1499943 + g 80 -2.9 -5.67967 | TTACAAATTCAGAGT TTCTT ATTTC AAGAA TTTTTTTATGCTCAT NAMH_1597 1501157 - 1499982 - | putative acyl-CoA reductase LuxC TERM 1291 1500367 - 1500378 + g 85 -4.4 -5.76237 | ATTCCCTCTTTATCT TCCA ACCG TGGA TTTTTTCTTTGTATA NAMH_1598 1502187 - 1501138 - | acyl protein synthase/acyl-CoA reductase RfbN TERM 1292 1502123 - 1502099 - G 71 -5.7 -4.48987 | overlap 1502102 TTCTTATAATGAAAA TTAGTTAGCTC ATT GAGCTCACTGA TAAGTAAAGCCTCTT NAMH_1599 1503496 - 1502180 - | hypothetical protein TERM 1293 1502643 - 1502656 + g 70 -4.5 -4.69464 | opp_overlap 1502643 CCCGGAATTGCAACA CCGAT TGAA GTCGG TTTTTCAAGTGTTTT TERM 1294 1503002 - 1502992 - G 71 -6.8 -4.18494 | GATGCGTATGCAAAA CGGA AAG TCCG TATGAATAATGCAAA NAMH_1600 1504209 - 1503478 - | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 1295 1503675 - 1503659 - G 79 -8 -3.98716 | AAATTATCAAGTAAA GGTGTG TCAAC CACACC CGGTATTACGGCATT NAMH_1601 1504328 - 1504209 - | hypothetical protein NAMH_1602 1505178 - 1504375 - | putative flagellar protein TERM 1296 1504641 - 1504659 + g 79 -4.6 -5.30575 | opp_overlap 1504642, overlap 1504642 1504646 1504647 TATGAAGCCTACACC ATCTGTTT AAA AAACAGAA TTTTTTAAGTTTTTC TERM 1297 1504642 - 1504658 + g 75 -8.1 -3.75905 | opp_overlap 1504642, overlap 1504641 1504646 1504647 ATGAAGCCTACACCA TCTGTTT AAA AAACAGA ATTTTTTAAGTTTTT TERM 1298 1505204 - 1505194 - R 79 -6.8 -4.62069 | opp_overlap 1505194 TTTCCATTCTAAAAA GGCT TCA AGCC TTTTTAAATGCCCAA TERM 1299 1505194 - 1505204 + r 79 -6.8 -4.65895 | opp_overlap 1505194 TTTCCATTCTAAAAA GGCT TCA AGCC TTTTTAAATGCCCAA tagD 1505649 - 1505263 - | glycerol-3-phosphate cytidylyltransferase TERM 1300 1505629 - 1505640 + g 74 -3 -5.243 | opp_overlap 1505619 1505616, overlap 1505619 CATATCAAACGTTCC GTAT GTTA ATAC TTTTTTCATCCTTTC NAMH_1604 1507118 - 1505646 - | putative glycerol phosphotransferase TERM 1301 1506377 - 1506358 - G 73 -3.6 -5.08824 | opp_overlap 1506358 TCTTTATTTAAAAAA TTTGATGT AGAA ACAACAAA ATTATAGTTATATTT TERM 1302 1506549 - 1506566 + g 77 -8.5 -3.59649 | opp_overlap 1506529 CCAGCTGAAAAGTTT TACAACC GGAA GGTTGTA TTTAAGGAGTTCTTT NAMH_1605 1508515 - 1507115 - | putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC TERM 1303 1508131 - 1508143 + g 77 -3.5 -5.41787 | opp_overlap 1508131, overlap 1508135 1508137 TTAATAAATCAATTA TATTT GCA AAATA TTTTTGTATTTTTTC TERM 1304 1508135 - 1508151 + g 73 -4.5 -5.01732 | opp_overlap 1508131, overlap 1508131 1508137 TAAATCAATTATATT TGCAAAA TAT TTTTGTA TTTTTTCAAACAGTT TERM 1305 1508428 - 1508440 + g 83 -6.3 -4.84359 | opp_overlap 1508420 1508427, overlap 1508420 CGACAACTTCAATAT CTGAA TTT TTCAG TTTTTGTGCAAATGA NAMH_1606 1509863 - 1508517 - | pyrophosphorylase TERM 1306 1508616 - 1508634 + g 82 -5.3 -5.32882 | overlap 1508603 ATCAAGAAGAGTATC TTTTGGC TCTTT GCCGAAA TTTTTTATCCTCATA TERM 1307 1508908 - 1508922 + g 70 -2.2 -5.38958 | TCAATTTCATCCTCA TTTAGA TCT TTTAAA TTTTTCTTTATCAAT TERM 1308 1509481 - 1509500 + g 70 -3.6 -4.86822 | ATCGCCACATCAACG GCATTATA TTTA TCTAATGC TTTTATTGTGTCATT NAMH_1607 1510558 - 1509863 - | CMP-N-acetylneuraminic acid synthetase NAMH_1608 1511658 - 1510555 - | spore coat polysaccharide biosynthesis protein SpsC TERM 1309 1510650 - 1510665 + g 73 -4 -5.07567 | CTTCAAGATAATATT TTTCCA TTTG TGGGAA TTTTTTAAAGTATCC NAMH_1609 1512662 - 1511673 - | polysaccharide biosynthesis protein TERM 1310 1513292 - 1513280 - g 80 -6.3 -4.7923 | ATTGAAATAAATAAA CTCTT AAT AAGAG CTATAAAACAAACCA NAMH_1610 1512731 - 1514662 + | motility accessory factor TERM 1311 1514797 - 1514785 - T 79 -2.6 -5.75478 | opp_overlap 1514777, overlap 1514777 1514775 AACTATATAAAAAAA GAGC AAAAA GCCC TTTTATTATTGTAGT NAMH_1611 1516284 - 1514803 - | major flagellin subunit FlaA_2 TERM 1312 1516482 - 1516469 - R 70 -8.1 -3.09581 | TAAACTTTCAATATA CTCCC AAAA GGGAG AAGAAGAGATTATTA TERM 1313 1516510 - 1516488 - R 79 -8.6 -3.88601 | opp_overlap 1516487 1516490 CAAAAGGGAGAAGAA GAGATTATTA TTG TAACAATCTC ATTACATTTTGTTGT NAMH_1612 1517964 - 1516495 - | flagellin TERM 1314 1517057 - 1517077 + g 79 -9.9 -3.25881 | GAAATACCTCTACCG TCTAAACTT CTT AAGTTTAGA TTACCTCTTTCATCT TERM 1315 1519358 - 1519382 + r 87 -11.4 -3.14344 | opp_overlap 1519343 CCCGCCAGGCACTGT CCCCCAGCAG GATTA CTGCTGCGGG TTAGTAGGCAGGATA TERM 1316 1520005 - 1520015 + r 78 -6.8 -4.36914 | opp_overlap 1520005 1520004 ACTAATAGCTCAAAC GCCT TAG AGGC TTTTCTCGGCACGAC TERM 1317 1521114 - 1521126 + r 70 -6.2 -4.2354 | AGGTTCTATTTCACT CCCC TCACC GGGG TTCTTTTCACCTTTC TERM 1318 1521705 - 1521665 - R 100 -11.4 -4.10657 | opp_overlap 1521665 1521672, overlap 1521679 TTACACTCTCTAAAA GTGTAAAGCTAAAAGTGT CTCTC ACACTCTTAACTTTTCAC TTTTCACTCTTCATT TERM 1319 1521665 - 1521705 + r 74 -7 -4.29928 | opp_overlap 1521665 1521679, overlap 1521672 TTACACTCTCTAAAA GTGTAAAGCTAAAAGTGT CTCTC ACACTCTTAACTTTTCAC TTTTCACTCTTCATT TERM 1320 1522004 - 1522023 + r 72 -9.2 -2.65808 | opp_overlap 1521995 1521992, overlap 1522001 1522001 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 1321 1522053 - 1522073 + r 70 -8.1 -3.07895 | overlap 1522063 TTCACCCCAGTCGCC GGGTCCACC GTA GGCGGCCCC TATCTTAGGGATACC TERM 1322 1523325 - 1523340 + r 77 -9 -3.32819 | TGTATGCGGTATTAG CACACC TTTC GGTGTG TTATCCCCCTCTGTG TERM 1323 1523807 - 1523817 + r 70 -4 -5.04249 | opp_overlap 1523807, overlap 1523816 TTTAAATATAATAAA TAAC GAA GTTA TTTCTTTTTTAGAAG infA 1524124 - 1523906 - | translation initiation factor IF-1 map 1524882 - 1524124 - | methionine aminopeptidase, type I TERM 1324 1524916 - 1524903 - R 87 -5.2 -5.63517 | CTCCTAAATAAAAAA GGGC ATTAAA GCCC TGTAACCGATAAAGT NAMH_1622 1526167 - 1524908 - | preprotein translocase, SecY subunit rplO 1526564 - 1526172 - | ribosomal protein L15 rpsE 1527043 - 1526567 - | ribosomal protein S5 rplR 1527425 - 1527060 - | ribosomal protein L18 NAMH_1626 1527971 - 1527435 - | 50s ribosomal protein l6 rpsH 1528378 - 1527983 - | ribosomal protein S8 rpsN 1528576 - 1528391 - | ribosomal protein S14p/S29e NAMH_1629 1529123 - 1528578 - | 50S ribosomal protein L5 rplX 1529379 - 1529128 - | ribosomal protein L24 TERM 1325 1529210 - 1529221 + g 74 -5.8 -4.58283 | GGATTTTGCTCAGTA GGCT TAAC AGCC TTTTTAACAACGTTC rplN 1529747 - 1529379 - | ribosomal protein L14 rpsQ 1529995 - 1529750 - | ribosomal protein S17 rpmC 1530201 - 1529995 - | ribosomal protein L29 rplP 1530613 - 1530188 - | ribosomal protein L16 rpsC 1531313 - 1530591 - | ribosomal protein S3 rplV 1531633 - 1531313 - | ribosomal protein L22 rpsS 1531924 - 1531643 - | ribosomal protein S19 rplB 1532758 - 1531934 - | ribosomal protein L2 rplW 1533049 - 1532768 - | ribosomal protein L23 rplD 1533634 - 1533053 - | ribosomal protein L4/L1 family TERM 1326 1533465 - 1533481 + g 77 -3 -5.40072 | overlap 1533447 CTAGCTCTACCTAGA CCTTTT TGTCT GAAAGG TTTTTTTCCACCACC rplC 1534206 - 1533631 - | ribosomal protein L3 TERM 1327 1533920 - 1533930 + g 76 -4 -5.23016 | opp_overlap 1533920, overlap 1533908 1533907 CCTTTACTTTTGAAA GTAA GTT TTAC TTTTTTAGCTTCTTT rpsJ 1534525 - 1534217 - | ribosomal protein S10 NAMH_1643 1535315 - 1534647 - | hypothetical protein NAMH_1644 1536573 - 1535494 - | putative ABC-2 NAMH_1645 1537673 - 1536570 - | ABC-2 TERM 1328 1537069 - 1537085 + g 79 -3.7 -5.46706 | opp_overlap 1537067 GATGAATAAAAGTTA AAAATCG TTC CGATTTC TTTTTCTTTTACAAT NAMH_1646 1539267 - 1537663 - | ABC transporter, ATP-binding/permease protein NAMH_1647 1540550 - 1539441 - | putative membrane fusion protein TERM 1329 1540513 - 1540494 - G 73 -7.1 -3.9328 | overlap 1540492 TACATATATAAAATA CCCCGCT ACAACA AGCAGGG CTATAATAATTACCG NAMH_1648 1541847 - 1540540 - | outer membrane efflux protein TERM 1330 1540691 - 1540712 + g 81 -5.9 -4.94992 | opp_overlap 1540691 CCCTCGTCAAATTTA GCTTTTATG TATT CATAATAGC TTTTTCTGGCTTTAA TERM 1331 1541312 - 1541325 + g 73 -4.5 -5.0133 | TCGGCTTTGTCTTTT GCGCT TAAT AGTGC TTTTTTAGCCGACTC NAMH_1649 1543345 - 1541837 - | major facilitator family transporter TERM 1332 1542229 - 1542246 + g 70 -4.1 -4.73388 | AGAAAAGCCCCATCG CAATTCC AAAA GGCATTG TTTTTAATACCGCTT NAMH_1650 1543685 - 1543332 - | hypothetical protein TERM 1333 1543718 - 1543744 + r 90 -12.4 -3.35015 | ATTATTTTCCATTTA GTTGAGTTTGCA TCT TGCAATCTCAAC TTCTCCGCTCATTCC NAMH_1651 1544839 - 1543715 - | hypothetical protein TERM 1334 1544897 - 1544914 + r 80 -5.6 -5.24449 | opp_overlap 1544900 AAGTTGATATGTCAA TAAGCC CTAAAA GGCTTA TTTTTTAAGTTTGTA NAMH_1652 1547062 - 1544912 - | oligosaccharyl transferase, STT3 subunit TERM 1335 1547223 - 1547207 - g 74 -5.3 -4.70515 | opp_overlap 1547207 TAGATTTAAAACAAA TAATAAT ATT ATTATTA AAATATAAAAAATTC NAMH_1653 1547128 - 1547973 + | chain length determinant protein TERM 1336 1548011 - 1547997 - g 74 -5.8 -4.55887 | GGTGAAAAATATAAA TTCAAT GAA ATTGAA AAACAAAAACTAAAA NAMH_1655 1547970 - 1548878 + | sugar transferase NAMH_1654 1549618 - 1548875 - | teichuronic acid biosynthesis NAMH_1656 1550885 - 1549611 - | O-Antigen Polymerase family TERM 1337 1550269 - 1550279 + gr 95 -2.6 -6.4753 | opp_overlap 1550269, overlap 1550270 ATCGAATATAATAAA TTTA TTT TAAA TTTTTTTTTATTTAA TERM 1338 1550679 - 1550699 + gr 74 -5.5 -4.67703 | TAAATTTATTTTAAT CCAAAAAAA GCC TTTTTGTGG TATTTTTTTTATATT NAMH_1657 1551804 - 1550851 - | D-glucuronyl C5-epimerase NAMH_1658 1552885 - 1551791 - | hypothetical protein TERM 1339 1552287 - 1552312 + g 91 -2.7 -5.97979 | overlap 1552289 1552292 ATATTCTCATATCGT TGTGCTAATTT AAAA AAATTATCATA TTTTTTTCTTGTTGT TERM 1340 1552834 - 1552850 + g 80 -6.6 -4.7254 | CCTTAATCCAACTTT CCACTA AAACA TAGTGG TTTTTACTGCAAACT NAMH_1659 1554018 - 1552882 - | putative glycosyl transferase NAMH_1660 1554274 - 1554071 - | hypothetical protein NAMH_1661 1555415 - 1554261 - | heptosyltransferase family TERM 1341 1554513 - 1554463 - G 100 -11.5 -4.33165 | gap 1, opp_overlap 1554479, overlap 1554464 1554466 1554509 GTAAATCTACCAAAA TG-ATTTCCGTTAGAGATGACAAA TATA TTTGTCATCTCTAACGCAACCGCA AAATGAGGTGCACTT TERM 1342 1554510 - 1554464 - G 95 -14.1 -3.19176 | gap 1, opp_overlap 1554479, overlap 1554463 1554466 1554509 TAAATCTACCAAAAT GATTTCCGTTAGAGATGACAAA TATA TTTGTCATCTCTAAC-GCAACC GCAAAATGAGGTGCA TERM 1343 1554509 - 1554466 - G 100 -15.6 -3.1462 | opp_overlap 1554479, overlap 1554464 1554463 AATCTACCAAAATGA TTTCCGTTAGAGATGACAAA TATA TTTGTCATCTCTAACGCAAC CGCAAAATGAGGTGC TERM 1344 1555386 - 1555396 + g 76 -2.6 -5.54338 | opp_overlap 1555377 1555382 1555386 ATTAAATAAAATATA TTTT ATA AAAA TTTTTATTTTCGTTA NAMH_1662 1556137 - 1555412 - | hypothetical protein NAMH_1663 1556787 - 1556137 - | hypothetical protein TERM 1345 1556581 - 1556605 + g 73 -4.3 -4.86731 | opp_overlap 1556571 TATATCATTTCTAAA TGGATGTGGAA TAC TGTCATATCCA TTTTCTTTAAAAAAA TERM 1346 1556800 - 1556814 + r 70 -4.4 -4.84017 | CATCAATCAATACCT TTTAAA TTT TTTAAA TTTTTCTCAGCCGTT NAMH_1664 1557002 - 1556787 - | hypothetical protein TERM 1347 1556971 - 1556983 + g 82 -3.4 -5.75538 | TTTGCTAAAATTTTA CCTT TTGAT AAGG TTTTTATTTTTTCAC NAMH_1665 1558116 - 1556995 - | glycosyl transferase, group 1 family protein TERM 1348 1557976 - 1557946 - G 73 -7.1 -4.00124 | opp_overlap 1557947, overlap 1557947 TACCTGATAACCAAA CGCATTAAAAATT TCAGC AATTTTTAATGCT TCTAATTTATTAGAA TERM 1349 1557975 - 1557947 - G 80 -10.6 -2.99593 | opp_overlap 1557947, overlap 1557946 ACCTGATAACCAAAC GCATTAAAAATT TCAGC AATTTTTAATGC TTCTAATTTATTAGA TERM 1350 1557947 - 1557975 + g 86 -10.6 -3.68962 | opp_overlap 1557947 1557946 ACCTGATAACCAAAC GCATTAAAAATT TCAGC AATTTTTAATGC TTCTAATTTATTAGA NAMH_1666 1559425 - 1558118 - | probable polysaccharide biosynthesis protein TERM 1351 1558936 - 1558924 - G 95 -4.9 -6.34616 | opp_overlap 1558924, overlap 1558915 TTAAAATAAAAAAAA TCTTT AAA AAAGA TGATATCAACAATGA NAMH_1667 1560637 - 1559426 - | GDP-L-fucose synthase 1 gmd 1561817 - 1560639 - | GDP-mannose 4,6-dehydratase NAMH_1669 1562259 - 1561810 - | GDP-mannose mannosyl hydrolase TERM 1352 1562089 - 1562101 + g 77 -4.9 -5.12474 | ACGCTTTTGTGCTTC TGAAA TTT TTTCA TTTTTATATATTCTG TERM 1353 1562160 - 1562174 + g 73 -3.6 -5.1517 | CAGGTTCGTTTACTC TTTTGC CAA GTAAAA TTTTTCCTTTGTTTT NAMH_1670 1563686 - 1562259 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 1354 1562359 - 1562345 - G 76 -10 -2.80699 | opp_overlap 1562343 1562357, overlap 1562342 1562340 CTTCAATCAAGACCA CCGGTA CTT TACCGG GATTGCTAAGCCTGT NAMH_1671 1564739 - 1563696 - | NAD-dependent epimerase/dehydratase family protein NAMH_1672 1565029 - 1564736 - | hypothetical protein NAMH_1673 1565465 - 1564992 - | hypothetical protein NAMH_1674 1566123 - 1565485 - | UDP-glucose 6-dehydrogenase TERM 1355 1565935 - 1565947 + g 73 -7.7 -3.86935 | ACAGTATCCTCCGTA TCCGA AGC TCGGA TTATTGTAATGATTA NAMH_1675 1566677 - 1566297 - | UDP-glucose 6-dehydrogenase NAMH_1676 1567096 - 1566674 - | S23 ribosomal NAMH_1677 1567464 - 1567228 - | hypothetical protein galE 1568494 - 1567490 - | UDP-glucose 4-epimerase TERM 1356 1567605 - 1567618 + g 72 -8.1 -3.46144 | opp_overlap 1567600 1567605, overlap 1567603 TCCGCTATAAGCATA GCAGG ATCA CCTGC TCTTCTTGGTGCTGT NAMH_1679 1568910 - 1568491 - | putative lipoprotein NAMH_1680 1569374 - 1568934 - | hypothetical protein TERM 1357 1569183 - 1569196 + g 78 -2.4 -5.71983 | overlap 1569161 AAACGTGGTTTTTTT TGCT CTTCTT AGCA TTTTTTTATACTTGC NAMH_1681 1569783 - 1569361 - | hypothetical protein purA 1571021 - 1569780 - | adenylosuccinate synthetase TERM 1358 1570937 - 1570947 + g 70 -4 -5.00616 | CCTGGCTTCTGATTA CTAT ATC ATAG TTTTTTGCCACCAAA NAMH_1683 1571829 - 1571014 - | tRNA synthetase, class II NAMH_1684 1572923 - 1571829 - | putative aminotransferase TERM 1359 1572874 - 1572892 + g 71 -7.5 -3.54424 | TCTCTAAGATAAGTC TCCCTTA CAAAA TAAGGGA TTTCAACAGGTCCCG tkt 1574776 - 1572920 - | transketolase NAMH_1686 1575621 - 1574776 - | geranyltranstransferase TERM 1360 1575210 - 1575223 + g 89 -9.5 -4.18762 | opp_overlap 1575209 GCCCCAAAACCATAC CGCCG GCTC CGGCG TTTTCACTGAGAATT NAMH_1687 1576521 - 1575625 - | hypothetical protein TERM 1361 1576181 - 1576193 + g 71 -6.3 -4.14392 | ATATCGGTAACCACG CTGTT TTT AACAG TTTTAACGCTTAACA TERM 1362 1576306 - 1576322 + g 70 -3.8 -5.011 | GAGCTTCGCATTATC GAAAAA CTTAA TTTTTC TTTTATTATTTGACT NAMH_1688 1576805 - 1576518 - | hypothetical protein panD 1577179 - 1576805 - | aspartate 1-decarboxylase NAMH_1690 1577524 - 1577189 - | ferredoxin, 2Fe-2S NAMH_1691 1578934 - 1577702 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase NAMH_1692 1579244 - 1578951 - | hypothetical protein NAMH_1693 1579590 - 1579294 - | NifU family protein rplQ 1579960 - 1579592 - | ribosomal protein L17 rpoA 1580952 - 1579960 - | DNA-directed RNA polymerase, alpha subunit TERM 1363 1580416 - 1580427 + g 76 -4.4 -5.14965 | overlap 1580415 TAAGATATTTTCAAT GTTG TAAA CAAC TTTTTTAATCGGACT rpsD 1581592 - 1580966 - | ribosomal protein S4 rpsK 1581987 - 1581595 - | ribosomal protein S11 TERM 1364 1582006 - 1582020 + r 72 -2.8 -5.49568 | TCACCCTTTATTTAG CTTTTG CGC CAACAG TTTTTCTTTTACCTT rpsM 1582366 - 1581998 - | ribosomal protein S13p/S18e TERM 1365 1582765 - 1582777 + r 82 -7.7 -4.72007 | opp_overlap 1582765 TTAAAGAAAGGAAAA GAGCT CAA AGCTC TTTGTTTTAATGAAA TERM 1366 1582777 - 1582765 - R 82 -7.7 -4.72863 | opp_overlap 1582765 TTAAAGAAAGGAAAA GAGCT CAA AGCTC TTTGTTTTAATGAAA NAMH_1699 1584070 - 1582784 - | xanthine/uracil/vitamin C permease TERM 1367 1583206 - 1583232 + g 73 -3.6 -5.11937 | opp_overlap 1583208, overlap 1583209 1583224 GTGCTGCTCCTATCA CAGTTGCAGCCG CGT CAGCTTCAAGTG TTTTTTGAAGTTCTT NAMH_1700 1584601 - 1584179 - | heat shock protein Hsp20 TERM 1368 1584684 - 1584699 + r 72 -4.8 -4.91357 | opp_overlap 1584695, overlap 1584695 AGTCAAGAAAGTTGA TATTAG AAGA CTAATA TTTTATTATCTCTTT NAMH_1701 1586026 - 1584686 - | hypothetical protein TERM 1369 1584879 - 1584893 + g 70 -3.6 -4.84359 | TTTGTACTCAACATG TCAAAT ACC GTTTGA TTTTTATCAAAATGC NAMH_1702 1587110 - 1586019 - | mechanosensitive ion channel TERM 1370 1587051 - 1587027 - G 80 -2.9 -5.72118 | overlap 1587029 1587036 AAAAAATATAAAAAA GGCTATTAATA TTT TATAAATAGGC AACGATAAAAATTGA TERM 1371 1587093 - 1587079 - G 82 -8.6 -4.02535 | TGATAATTAAGCAAA TCAAGC AGC GCTTGA GGAAGGTTTTGAGCC NAMH_1703 1588818 - 1587112 - | penicillin-binding protein TERM 1372 1587494 - 1587522 + g 72 -8.3 -3.52192 | opp_overlap 1587502 1587503, overlap 1587495 1587503 ACTTCAATACCGTTA TTATTAAATGCGT TAT ACGCTTTTAATAG TTGTATAAAATTCAC TERM 1373 1587495 - 1587521 + g 75 -9.6 -2.70994 | opp_overlap 1587502 1587503, overlap 1587494 1587503 CTTCAATACCGTTAT TATTAAATGCGT TAT ACGCTTTTAATA GTTGTATAAAATTCA TERM 1374 1587503 - 1587513 + g 74 -6.8 -4.38129 | opp_overlap 1587503 1587502, overlap 1587495 1587494 CCGTTATTATTAAAT GCGT TAT ACGC TTTTAATAGTTGTAT TERM 1375 1588068 - 1588080 + g 74 -3.4 -5.21506 | GATAAAGGGATTTTG CTTC ATCAA GAAG TTTTTCTATTCTTCT TERM 1376 1588632 - 1588654 + g 89 -7.9 -5.2197 | ACACACTGTAGATTT TTTCACTTT TCGCC AAAGTGAAA TTTTTGGTTTTTATA TERM 1377 1588765 - 1588750 - G 87 -6.8 -5.39905 | ACTAAAGAACAAAAA GGCACC GAAA AGTGCC ATTACAAGAAGAAAA fliE 1589108 - 1588818 - | flagellar hook-basal body complex protein (FliE) TERM 1378 1589027 - 1589046 + g 72 -2.8 -5.29445 | opp_overlap 1589033, overlap 1589045 TTTTTAACAAATCCT CAAAACTG CCGT CGGCTTTG TTTTTATTATTAACA flgC 1589616 - 1589119 - | flagellar basal-body rod protein FlgC TERM 1379 1589381 - 1589398 + g 74 -6.3 -4.44797 | ACCGCGTAATTTTCA CCTTCTT CATC AAGAGGG TTTTCATATTGATGG flgB 1590057 - 1589626 - | flagellar basal-body rod protein FlgB NAMH_1707 1590238 - 1591377 + | cell cycle protein TERM 1380 1591691 - 1591674 - g 87 -6.3 -5.4477 | overlap 1591682 AAACTGCTAAAAAAA CACAACA TCCA TGCTGTG TTCAGCGTAGGCGGA TERM 1381 1592278 - 1592258 - g 77 -4.7 -5.1523 | TTTAGAAGATAAAAA TGCCGGATT TGT AATCAGACA AGACGAAATTGATAT murG 1591374 - 1592420 + | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase gmhA 1592957 - 1592400 - | phosphoheptose isomerase NAMH_1710 1594348 - 1592960 - | bifunctional protein HldE rfaD 1595340 - 1594345 - | ADP-L-glycero-D-manno-heptose-6-epimerase NAMH_1712 1595825 - 1595337 - | D,D-heptose 1,7-bisphosphate phosphatase rfaF 1596703 - 1595822 - | lipopolysaccharide heptosyltransferase II NAMH_1714 1597691 - 1596687 - | WabG NAMH_1715 1598937 - 1597672 - | O-Antigen Polymerase family NAMH_1716 1600076 - 1598952 - | WbwB TERM 1382 1599216 - 1599231 + g 84 -6.2 -5.24129 | opp_overlap 1599215 ACTATTTGAAGACAT TGCAAA TAAT TTTGCA TTTTTTATCCAAGGA NAMH_1717 1600633 - 1600073 - | acetyltransferase, CysE/LacA/LpxA/NodL family NAMH_1718 1601705 - 1600623 - | glycosyl transferase, family 9 NAMH_1719 1602640 - 1601702 - | putative heptosyliii transferase NAMH_1720 1603704 - 1602637 - | putative WalR protein TERM 1383 1602997 - 1603007 + g 72 -2.6 -5.2894 | TACGTTTTTTAAGTT TAAA TCT TTTA TTTTCTTTTCTATTT NAMH_1721 1604759 - 1603701 - | putative lipopolysaccharide heptosyltransferase III NAMH_1722 1605463 - 1604756 - | lipopolysaccharide core biosynthesis glycosyl transferase WaaE NAMH_1723 1606325 - 1605456 - | lipid A biosynthesis acyltransferase TERM 1384 1606101 - 1606112 + g 82 -3 -5.69023 | opp_overlap 1606101, overlap 1606094 CAGATTGCTTACGAA GTTT TCAT AAAC TTTTTTTGCTATTTT NAMH_1724 1607232 - 1606315 - | lipopolysaccharide heptosyltransferase I TERM 1385 1607930 - 1607920 - g 77 -5.4 -4.84914 | ATCGAGACAATAAAA GCAT ACA ATGC CAAAATATTCGAATA NAMH_1726 1607290 - 1608990 + | multidrug resistance protein msba NAMH_1725 1610361 - 1608982 - | YjeF-related protein N-terminus TERM 1386 1609387 - 1609400 + g 80 -2.5 -5.72622 | TACGGCTTTTTTATT TAAAA ACGA TTTTA TTTTTTCTTTATAAA NAMH_1727 1611065 - 1610439 - | Ser/Thr protein phosphatase family protein TERM 1387 1610585 - 1610573 - G 80 -6.3 -4.70879 | overlap 1610575 CGCAAAGCGTAAAAA CTTCT TCA AGAAG ATTAGAGATGTTTTG NAMH_1728 1612541 - 1611066 - | putative Mg chelatase homolog TERM 1388 1612488 - 1612503 + gr 72 -2.6 -5.25976 | gap 1 TTGGGCTTCAAATCC TTCAAGC GTA GCT-GAA TTTATTTTTTTCGTT def 1613029 - 1612505 - | peptide deformylase TERM 1389 1612971 - 1612994 + gr 73 -7.6 -3.67558 | opp_overlap 1612971, overlap 1612963 1612969 TCAAATCTTTCAACA GGTTTTGAAA TCTG TTTTAAAACC TTATTCGGATATGTA NAMH_1730 1614045 - 1613029 - | diguanylate cyclase TERM 1390 1613463 - 1613479 + g 70 -2.3 -5.21236 | overlap 1613464 1613470 TAATTTCTTTTTTCA GTTCTTT TAA AAAGAAA TTTTTATTATAAATT TERM 1391 1613762 - 1613778 + g 83 -2.4 -5.89947 | overlap 1613750 AGCTCTTTTGAATAT TTAAAA GACTG TTTTAA TTTTTTTTCAATTTC clpP 1614635 - 1614045 - | ATP-dependent Clp protease, proteolytic subunit ClpP tig 1615921 - 1614635 - | trigger factor TERM 1392 1614868 - 1614886 + g 79 -4.6 -5.28942 | overlap 1614873 TAAGTTTAACTCTGT CTTTTGCT TCA GGTAAAAG TTTTTCTTTAAGCTC TERM 1393 1615890 - 1615902 + g 93 -4.1 -5.98781 | GCTTTGATTATACTA TTGGC AGA GTCAA TTTTTTTTGCTTCTA folE 1615972 - 1616550 + | GTP cyclohydrolase I TERM 1394 1617526 - 1617500 - g 84 -5.2 -5.45802 | opp_overlap 1617506 GCCGGAAAAGAAAAA GACAAAGGCT CAATTAC AGCCTTTTTC ACGGTTTTGGTAGAA NAMH_1734 1616615 - 1617913 + | flagellum-specific ATP synthase TERM 1395 1619715 - 1619705 - g 72 -2.6 -5.21709 | TCCGATATTAAAAAA TTAA TCG TTAA TGCAATTAAAAACGA NAMH_1735 1617944 - 1620424 + | sensory box sensor/ggdef/eal domain protein NAMH_1742 1621062 - 1622765 + | transporter NAMH_1741 1623840 - 1622743 - | hypothetical protein ilvD 1623929 - 1625617 + | dihydroxy-acid dehydratase TERM 1396 1625951 - 1625963 + G 77 -3.4 -5.40072 | ATTCTACTGATTTAT TGGA AGAAA TCCA TTTTTTTAAAAGACC TERM 1397 1626320 - 1626298 - g 83 -6.4 -5.00616 | overlap 1626299 GCTTTTTTTAAAAAA CTTCCATCTT ACG AAAATGGAAA ATGGAAAGTATTGGG TERM 1398 1626319 - 1626299 - g 71 -7.7 -3.60048 | overlap 1626298 CTTTTTTTAAAAAAC TTCCATCTT ACG AAAATGGAA AATGGAAAGTATTGG TERM 1399 1626658 - 1626644 - g 76 -2.8 -5.54264 | AAATACCTAAAAAAA CACCTC CGA AAGATG AATTAGATGTTTATA TERM 1400 1626688 - 1626678 - g 70 -4 -4.84761 | opp_overlap 1626666, overlap 1626666 AGATGTTTATAAAAA CAAT ATT ATTG ATGTTGCAAACGATA NAMH_1744 1625833 - 1627242 + | diguanylate cyclase NAMH_1746 1627294 - 1628133 + | transporter gate domain protein NAMH_1745 1628633 - 1628130 - | putative ATP/GTP-binding protein TERM 1401 1628756 - 1628770 + r 74 -5.8 -4.55798 | GTCACATTTCTAAGT TGTATA TTT TATACA TTTTGATTTCAAATC TERM 1402 1628805 - 1628784 - R 95 -11.7 -3.60296 | opp_overlap 1628783 1628782 1628780 CATTTTGATTTCAAA TCCCGAAAA AAGC TTTTCGGGA AATATTATTCTTCCT NAMH_1747 1629382 - 1628810 - | hypothetical protein NAMH_1748 1629703 - 1629440 - | flagellar basal body protein FlhB NAMH_1749 1630166 - 1629696 - | 2'-5' RNA ligase NAMH_1750 1630372 - 1630163 - | hypothetical protein leuC 1630442 - 1631719 + | 3-isopropylmalate dehydratase, large subunit TERM 1403 1631709 - 1631725 + T 79 -7.3 -4.52143 | overlap 1631717 AAATCGCAGATCCGA GAGACCT TTA AGGTTTC TTTATTCTCTTTCAA TERM 1404 1631834 - 1631806 - T 100 -8.4 -5.34632 | gap 1, opp_overlap 1631806 1631810 1631813 AATAAAATATAAAAA GCAA-TAAGACTA AAAG TAGTCTTATTTGC TGATTAAATTGATTT TERM 1405 1631810 - 1631829 + T 77 -8 -3.85362 | opp_overlap 1631806, overlap 1631806 1631813 AAATATAAAAAGCAA TAAGACTA AAAG TAGTCTTA TTTGCTGATTAAATT NAMH_1752 1632297 - 1631827 - | metallo-beta-lactamase family protein TERM 1406 1632595 - 1632582 - g 72 -2.5 -5.28983 | TTTAAAACACAAAAA TTTTA TATT TAAAA AAGTACAAAACAATG TERM 1407 1632891 - 1632879 - g 72 -4.9 -4.83032 | AGATGAAATAGAAAA GTTTT TGA AAAAC GAGCTTTTTATAGAA NAMH_1753 1632385 - 1633344 + | putative agmatine deiminase TERM 1408 1634580 - 1634604 + T 87 -11.4 -3.14344 | opp_overlap 1634565 CCCGCCAGGCACTGT CCCCCAGCAG GATTA CTGCTGCGGG TTAGTAGGCAGGATA TERM 1409 1635227 - 1635237 + T 78 -6.8 -4.36914 | opp_overlap 1635226 1635227 ACTAATAGCTCAAAC GCCT TAG AGGC TTTTCTCGGCACGAC TERM 1410 1636336 - 1636348 + T 70 -6.2 -4.2354 | AGGTTCTATTTCACT CCCC TCACC GGGG TTCTTTTCACCTTTC TERM 1411 1636887 - 1636927 + T 74 -7 -4.29928 | opp_overlap 1636887 1636901, overlap 1636894 TTACACTCTCTAAAA GTGTAAAGCTAAAAGTGT CTCTC ACACTCTTAACTTTTCAC TTTTCACTCTTCATT TERM 1412 1636927 - 1636887 - T 100 -11.4 -4.10657 | opp_overlap 1636887 1636894, overlap 1636901 TTACACTCTCTAAAA GTGTAAAGCTAAAAGTGT CTCTC ACACTCTTAACTTTTCAC TTTTCACTCTTCATT TERM 1413 1637226 - 1637245 + T 72 -9.2 -2.65808 | opp_overlap 1637217 1637214, overlap 1637223 1637223 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 1414 1637275 - 1637295 + T 70 -8.1 -3.07895 | overlap 1637285 TTCACCCCAGTCGCC GGGTCCACC GTA GGCGGCCCC TATCTTAGGGATACC TERM 1415 1638547 - 1638562 + T 77 -9 -3.32819 | TGTATGCGGTATTAG CACACC TTTC GGTGTG TTATCCCCCTCTGTG TERM 1416 1639160 - 1639176 + T 79 -8.1 -4.03793 | AATCAGTAATTTCCC TTATCCA TGC TGGATAA TATTTTCTTCTATCC pcm 1639864 - 1639256 - | protein-L-isoaspartate O-methyltransferase NAMH_1762 1640553 - 1639861 - | hydrolase, carbon-nitrogen family purB 1641892 - 1640561 - | adenylosuccinate lyase TERM 1417 1642182 - 1642168 - g 78 -2.1 -5.69068 | CAAAAATACAAAAAA CAGCT TGAAG AACTG CAGAAAAAAGTGGAT TERM 1418 1642274 - 1642263 - g 71 -3 -5.09426 | CGCAATGGGAAAAAA GAAA GATT TTTC GGATATGATTAAATA tatB 1641964 - 1642290 + | twin arginine-targeting protein translocase TatB TERM 1419 1642698 - 1642682 - g 77 -5.9 -4.73388 | AATGGCCAGCAAAAA CAAATTC AGC GAATCTG TCCTAAAAAAAGCCT NAMH_1765 1642290 - 1643174 + | ribosomal large subunit pseudouridine synthase C TERM 1420 1643568 - 1643584 + T 74 -9.5 -2.62396 | opp_overlap 1643580 TCGAACCCCCGACCT GCTGATT ACA AATCAGC TGCTCTAGCCAACTG NAMH_1768 1644177 - 1643764 - | hypothetical protein NAMH_1769 1644253 - 1644963 + | transcriptional regulator, AraC/XylS family TERM 1421 1644967 - 1644981 + F 88 -8.6 -4.40894 | CCCAAGCATTAATTT TGCAAC TCA GTTGCA TTTTGATATAATTTC NAMH_1770 1645000 - 1645398 + | ferric uptake regulation protein TERM 1422 1645652 - 1645636 - gf 70 -4.5 -4.82901 | GCCGTTTGATAAAAA GTATCTT TCT AAAATAC AAGAAATCAATCCTG NAMH_1771 1645367 - 1646170 + | zinc ABC transporter, zinc-binding protein NAMH_1772 1646167 - 1646889 + | ABC transporter NAMH_1773 1646877 - 1647656 + | ABC transporter integral membrane protein TERM 1423 1647980 - 1647953 - g 87 -2.1 -5.9667 | gap 1, opp_overlap 1647953 1647955 1647956, overlap 1647956 AAAAACATAAAAAAA GAAGG-TTATCA GGTTG TGGTAACCCTTC TTGATGAGGAAACGG TERM 1424 1647976 - 1647956 - g 70 -4 -4.94703 | opp_overlap 1647955 1647953 1647956, overlap 1647953 AACATAAAAAAAGAA GGTTATCA GGTTG TGGTAACC CTTCTTGATGAGGAA NAMH_1774 1647683 - 1648312 + | tRNA guanosine-2'-O-methyltransferase NAMH_1775 1648450 - 1648313 - | putative lipoprotein NAMH_1776 1649609 - 1648452 - | hypothetical protein TERM 1425 1648643 - 1648661 + g 81 -7.6 -4.43221 | opp_overlap 1648641 1648639 1648643 AAGGTTTAAAATAGA TCAAATAT GTG ATATTTGA TTTTATAAAATATTT NAMH_1777 1650301 - 1649606 - | metal-dependent hydrolase of the beta-lactamase superfamily NAMH_1778 1652067 - 1650298 - | hypothetical protein TERM 1426 1650379 - 1650391 + g 77 -3.4 -5.42265 | opp_overlap 1650379 TCCTCTACTCATAAG CACT CTGTA AGTG TTTTTTATAATTTGA TERM 1427 1651058 - 1651070 + g 74 -3.3 -5.28481 | overlap 1651059 TGATTTTCACCTTTT GCGAA AAG TCCGC TTTTTTCGTTAAGTC TERM 1428 1651216 - 1651228 + g 73 -4.1 -4.89009 | overlap 1651217 TGATTTGTATACTTC TCTTG GAG CAAGG TTTTTGGTTACATAT NAMH_1779 1653151 - 1652045 - | putative normocyte-binding protein 1 NAMH_1780 1654695 - 1653148 - | hypothetical protein NAMH_1781 1655014 - 1654685 - | nucleotide pyrophosphohydrolase NAMH_1782 1655619 - 1655011 - | SAM-dependent methyltransferase, UbiE/COQ5 family TERM 1429 1655182 - 1655199 + g 74 -3.5 -5.23943 | AAACGTAGCAGGTGC GTAAAAT TTAG ATTTTGC TTTGTTTTTTTCATA TERM 1430 1655506 - 1655528 + g 70 -4.1 -4.7416 | gap 1, overlap 1655506 GACTCCCACTTCCAT CCC-TCTGCC TCTT GGCAAAAGGG TTTTTACGGTTTTAA NAMH_1783 1656321 - 1655644 - | anaerobic ribonucleoside-triphosphate reductase activating protein TERM 1431 1655871 - 1655894 + g 70 -2.4 -5.34055 | opp_overlap 1655863 CTTCAAATTCAACAT CGCTTGATAT TAAA AAATCGAGTG TTTTTTCGTATTTGT TERM 1432 1656113 - 1656099 - G 70 -7 -3.86822 | TAATGTTTTTATAAA GCGTGG CTT CCCCGC CTGTAAAACTTACAC NAMH_1784 1656482 - 1656315 - | oxygen-sensitive ribonucleoside-triphosphate reductase TERM 1433 1656407 - 1656419 + g 95 -2.7 -6.14618 | AACCCATTACTCTTG TGTAT ACC ATGCA TTTTTTTCTTTTGTC nrdD 1658613 - 1656502 - | anaerobic ribonucleoside-triphosphate reductase TERM 1434 1658528 - 1658538 + g 86 -5.4 -5.626 | TACGATACGTTTGTC GCTT CAA AAGC TTTTTTTATCGCATC pyrC 1659736 - 1658762 - | dihydroorotase, homodimeric type NAMH_1787 1660039 - 1659791 - | hypothetical protein NAMH_1788 1661943 - 1660114 - | metallo-beta-lactamase family protein TERM 1435 1660275 - 1660285 + g 76 -4 -5.23765 | overlap 1660281 AAATATCCTCCATCT CTTT TGC AAAG TTTTTGTCTTCTTTG NAMH_1789 1662623 - 1661964 - | dimethyladenosine transferase (S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase) hisF 1662800 - 1663564 + | imidazoleglycerol phosphate synthase, cyclase subunit NAMH_1791 1663582 - 1664013 + | hypothetical protein NAMH_1792 1664039 - 1664599 + | purine nucleoside phosphorylase NAMH_1793 1664592 - 1665656 + | radical SAM enzyme, Cfr family NAMH_1795 1665666 - 1666001 + | hypothetical protein NAMH_1794 1666810 - 1665998 - | putative periplasmic protein TERM 1436 1666274 - 1666295 + g 74 -5.9 -4.50988 | overlap 1666276 TTTAGTTTCAGTTTT TACATTAGC ATTT GCTAATGGA TTCTTTTTAATCTCA NAMH_1796 1667236 - 1666820 - | transcriptional regulator, MarR family NAMH_1797 1667865 - 1667347 - | thiol peroxidase dapF 1668677 - 1667949 - | diaminopimelate epimerase TERM 1437 1668390 - 1668409 + g 86 -5.1 -5.75342 | AGCTTCAATAACTCC TGCAATT GTCAAA AATTGCA TTTTTTTTGGAGCCA NAMH_1799 1670718 - 1668658 - | diguanylate cyclase/phosphodiesterase kdsA 1670809 - 1671594 + | 3-deoxy-8-phosphooctulonate synthase ribH 1671604 - 1672068 + | 6,7-dimethyl-8-ribityllumazine synthase nusB 1672068 - 1672478 + | transcription antitermination factor NusB TERM 1438 1672663 - 1672647 - g 91 -5.1 -5.81622 | opp_overlap 1672647 1672662, overlap 1672649 1672657 1672659 1672662 AGAAAATCAAAAAAA CATGATG AAA CATCAGG TTAATAATATTATTA TERM 1439 1672661 - 1672649 - g 76 -6.3 -4.51121 | opp_overlap 1672647, overlap 1672647 1672657 1672659 AAAATCAAAAAAACA TGATG AAA CATCA GGTTAATAATATTAT TERM 1440 1672662 - 1672681 + G 70 -8 -3.30159 | opp_overlap 1672647 1672659 1672657 1672662, overlap 1672647 CATGATGAAACATCA GGTTAATA ATAT TATTAACC TTATCGAAACATTAA TERM 1441 1673944 - 1673934 - g 76 -2.6 -5.48163 | AAATAAATTAAAAAA TAAA AAA TTTA AAATCGGTAATGATG TERM 1442 1674506 - 1674491 - g 80 -2.6 -5.71712 | TTTCAGATAAAAAAA TAAATG AGAT CATTCA TCAACTCTCAAAAAT NAMH_1803 1672471 - 1674822 + | ggdef family protein TERM 1443 1674806 - 1674830 + T 87 -7.9 -4.76478 | opp_overlap 1674786 1674808 1674811, overlap 1674808 CTAAACCTTTTGATA TAGAAGAGCTG AAA TAGCTCTTCTC TTTTAATTTATTTTA TERM 1444 1674808 - 1674828 + T 89 -10.5 -3.95442 | opp_overlap 1674786 1674808 1674811, overlap 1674806 AAACCTTTTGATATA GAAGAGCTG AAA TAGCTCTTC TCTTTTAATTTATTT TERM 1445 1674828 - 1674808 - T 75 -9.8 -2.8806 | opp_overlap 1674808 1674806, overlap 1674786 1674811 AAACCTTTTGATATA GAAGAGCT GAAAT AGCTCTTC TCTTTTAATTTATTT NAMH_1804 1675308 - 1674838 - | hypothetical protein NAMH_1805 1675928 - 1675344 - | membrane protein ruvC 1676386 - 1675922 - | crossover junction endodeoxyribonuclease RuvC