TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.37343 %AT, 3874992 nt, 37715 terms. Intergenic: 0.419282 %AT, H2T: 674634 nt, 6414 terms; T2T: 235350 nt, 5021 terms; H2H: 280036 nt, 5511 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|92109250|ref|NC_007959.1| Nitrobacter hamburgensis X14 plasmid 1, complete sequence (length 294829) Nham_4041 99 - 1436 + | transposase, IS4 TERM 1 2262 - 2274 + TF 75 -9.1 -4.03234 | opp_overlap 2271 CATCGAGCCCACTCA GGGCT ACA AGCCC TTTGTCTACAACAAC TERM 2 2585 - 2597 + GT 91 -9.1 -4.65895 | overlap 2576 CGATCCGCTGCTCGA CGGCT TTC AGCCG TTTTTCGATGCCCAC Nham_4044 3593 - 2613 - | LysR family transcriptional regulator Nham_4043 2346 - 2672 + | nitrogen regulatory protein P-II (GlnB, GlnK) TERM 3 2985 - 2971 - Gf 76 -5.6 -4.62069 | CCGTGACGCGAAAAA TGCCGC TCT GCCGCA TTGCGCGTGCCCGAG Nham_4046 4067 - 5104 + | fructose-1,6-bisphosphatase Nham_4047 5125 - 5997 + | phosphoribulokinase/uridine kinase TERM 4 6088 - 6062 - f 70 -2.3 -4.72272 | opp_overlap 6065 6066 6068, overlap 6064 6067 GGGCGTGACCAAAAA TATGATCG-CGCG AAG CGCGACG-TCTTA TCAGGGCAGCCAAAT Nham_4048 6119 - 7204 + | fructose-1,6-bisphosphate aldolase TERM 5 7909 - 7930 + G 79 -10.9 -3.8647 | ACATCAACTCGCAGC CGTTCATGC ACTG GCGTGAACG TTTCCTCTACTGCAT TERM 6 8450 - 8396 - g 81 -13.8 -3.63515 | gap 3, opp_overlap 8383 8398 GGCCAGCCTCAACAA GATGATGCCGGTTGCTTCCGG-CGGCA TTCA TGCCGGCCAGATGC-ACCAGC-TCATC CAGCATCTCGGTGAA rbcL 7266 - 8732 + | ribulose bisophosphate carboxylase Nham_4050 8746 - 9171 + | ribulose bisphosphate carboxylase, small chain TERM 7 9236 - 9263 + F 100 -14.9 -4.36914 | AGTTCCGGATGTACT GCTCCGTCGTC TCGCAT GGCGACGGAGC TTTTCTCCCCCGAGC TERM 8 9490 - 9506 + G 70 -12.3 -3.17685 | opp_overlap 9486 9490, overlap 9505 AGAAAATGGAACTGA CGTCGGA GAC TCCGACG TTGCATATGTCGTTC Nham_4051 9324 - 10238 + | AAA ATPase, central region Nham_4052 12046 - 12357 + | XRE family transcriptional regulator TERM 9 12390 - 12379 - f 74 -2.2 -5.00616 | TGGCTGCCGAAAAAA TGGA CCGC CCCA TCGGAGATGACGAAA Nham_4053 12595 - 12999 + | hypothetical protein Nham_4054 16784 - 13284 - | hypothetical protein TERM 10 13485 - 13535 + g 74 -9 -3.92075 | gap 2, overlap 13486 GGCGTCCAGCCGATG CACGACCATGATCCGGGCCCGGCC CTCAT GGTCGAGCC-GGATCA-GGTCGCC TTTGTGAATGCGCAT TERM 11 13486 - 13534 + g 70 -12.5 -2.94924 | gap 2, overlap 13485 GCGTCCAGCCGATGC ACGACCATGATCCGGGCCCGGCC CTCAT GGTCGAGCC-GGATCA-GGTCGC CTTTGTGAATGCGCA TERM 12 13862 - 13872 + g 84 -8.2 -4.45168 | GCAGAGCGTCCGCAA GGGC AAC GCCC TTTGTCTTTTCGACA TERM 13 16920 - 16947 + r 75 -10.7 -3.65991 | gap 1, opp_overlap 16918, overlap 16918 TTCTAAGAACTGACT GTGGCTA-CAGC TTTTT GCTGGTAGCCAC TTCTCTTGACAAAGT TERM 14 17094 - 17071 - R 100 -13.8 -4.42653 | opp_overlap 17067 17072, overlap 17072 AGCTTATGCACAAAA TGGGGCACCC CGCA GGGTGCCCCT TCCATTTGCGACAGT TERM 15 17072 - 17093 + r 93 -17.3 -3.27525 | opp_overlap 17071 17072, overlap 17067 GCTTATGCACAAAAT GGGGCACCC CGCA GGGTGCCCC TTCCATTTGCGACAG TERM 16 17093 - 17072 - R 93 -17.3 -3.2511 | opp_overlap 17072 17067, overlap 17071 GCTTATGCACAAAAT GGGGCACCC CGCA GGGTGCCCC TTCCATTTGCGACAG Nham_4056 20899 - 19058 - | HipA-like TERM 17 21705 - 21675 - g 89 -11.1 -4.258 | opp_overlap 21667 CTAGCTACGAAGAAA CCTTCGTTCTGGC GCACA GCCAGACCGACGG AAAAGTACGCGAGCT Nham_4057 21080 - 22096 + | hypothetical protein Nham_4058 23470 - 22196 - | transposase, mutator type Nham_4060 25291 - 24401 - | hypothetical protein Nham_4065 27364 - 27131 - | hypothetical protein Nham_4066 27394 - 27909 + | hypothetical protein Nham_4067 28751 - 28065 - | GCN5-related N-acetyltransferase Nham_4068 28935 - 30254 + | major facilitator superfamily permease TERM 18 31099 - 31116 + T 70 -4.1 -4.61873 | overlap 31083 CTCGCCTATCAGCGT GGTTTCG GGAT CGAGATC TTTTGCTTTCTGCCC TERM 19 31520 - 31492 - T 100 -23.2 -2.53876 | CGCGAGTTCAACCCA CGGGCGAGCGCC CCTTC GGCGCTCGCCCG CCCGATACGCACAGC TERM 20 32022 - 31966 - T 76 -11.7 -3.3482 | gap 3 TAATCTCGTAACGAA CGTACGCGGCGA-AGCACCGCCG-GGAC ATCG GCCCGCAGCC-TGCTCTCGCCGCGTATG CCGAACTCGTCAAGC Nham_4071 32696 - 32442 - | hypothetical protein TERM 21 34751 - 34768 + G 70 -10.5 -3.65046 | opp_overlap 34750 34748 CATTTCGAGACAGAG CGCGGCG CCGC CGCCGTG TTGTTCGGCTGGCCG Nham_4072 33953 - 35374 + | cytochrome bd ubiquinol oxidase, subunit I Nham_4073 35378 - 36388 + | cytochrome d ubiquinol oxidase, subunit II Nham_4074 36763 - 37200 + | hypothetical protein TERM 22 37690 - 37706 + F 78 -6.5 -4.61566 | opp_overlap 37690 ACCTAGAGAGAGGAA GGCCC AGACATG GGGCC TTTTGTCGTTTGCGG Nham_4076 37862 - 38227 + | PRC-barrel Nham_4077 38670 - 39788 + | hypothetical protein Nham_4078 39970 - 40446 + | Ferritin and Dps Nham_4079 40531 - 43485 + | aconitate hydratase 1 Nham_4080 43501 - 43971 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 23 44332 - 44347 + G 76 -7.5 -4.36914 | opp_overlap 44328, overlap 44339 TCGGCCGGAAAGTCT CCGCG AGCCGC CGCGG TTTTCTCGGCGGAGC TERM 24 44339 - 44388 + G 76 -14.1 -3.21747 | opp_overlap 44328, overlap 44332 GAAAGTCTCCGCGAG CCGCCGCGGTTTTCTCGGCGGAG CCGG CCTTGCCGCGATGAGCGCGGCGG TTGGTGGTGCGATCC Nham_4081 44217 - 45602 + | twin-arginine translocation pathway signal TERM 25 45631 - 45658 + G 91 -15.6 -3.85698 | gap 1, overlap 45632 45643 TTTGCACACTCGCAC G-GCTGCCGCGCG CAT TGCGCGGCAGCTC TTTCTGGCCGCGGCG TERM 26 45632 - 45656 + G 95 -19.3 -3.51934 | overlap 45631 45643 TTGCACACTCGCACG GCTGCCGCGCG CAT TGCGCGGCAGC TCTTTCTGGCCGCGG TERM 27 45737 - 45757 + G 84 -8.1 -4.42386 | opp_overlap 45717 45716, overlap 45736 GAGGATTATCCGCCC GGCGACGGC CGC GACGGCGCC TTTTATGCCTGCACC TERM 28 45834 - 45813 - g 79 -15.9 -2.87274 | opp_overlap 45812 45811, overlap 45810 CGGCACAAGGAATGA GTCGCGTCC AATG GGACGCGAC GATTAATCTCATGAC Nham_4082 45608 - 45973 + | hypothetical protein TERM 29 46456 - 46477 + F 87 -3.6 -5.45802 | overlap 46449 TGGTATCGCAGAAAC TCTCCAGC TCGTTT GCTGGCGG TTTTTGTTTTGGGCA TERM 30 47228 - 47207 - f 71 -10.1 -3.50572 | opp_overlap 47226 ATGGAGCTGACACAA GGCCTCGTC ATGT GATGAGGCC CGCCGCGCATATTGT Nham_4085 48858 - 49952 + | tISRso5; ISRSO5-transposase protein Nham_4086 50698 - 50075 - | hypothetical protein Nham_4087 50727 - 51122 + | hypothetical protein TERM 31 51135 - 51161 + F 100 -14.5 -5.06414 | gap 1, opp_overlap 51135 TAACGGCTAAGGGAA GGGCGCGGAGTG ATGT CA-TCCGCGCCC TTTTTCTTGGGCGCG TERM 32 51161 - 51135 - f 86 -14.5 -3.18199 | gap 1, opp_overlap 51135 TAACGGCTAAGGGAA GGGCGCGGAGTG ATGT CA-TCCGCGCCC TTTTTCTTGGGCGCG TERM 33 51734 - 51723 - g 75 -3.6 -4.87665 | GCCCATTCACAAAAA GGCG TTCA CACC CGCGCAATATGAGGC Nham_4089 51496 - 51960 + | hypothetical protein TERM 34 52148 - 52129 - T 73 -11.4 -3.36273 | opp_overlap 52129 TGGCGGCAAGATGAA GGCCGACA TTTC TGCCGGCC TTTGGAACGACGACC Nham_4090 52322 - 52170 - | hypothetical protein Nham_4091 52605 - 52324 - | hypothetical protein TERM 35 52848 - 52900 + H 100 -14.8 -4.51799 | gap 1, opp_overlap 52847 TCGCAGTGACGGAAT CCGCG-CTGGGTGGGGTCAAGACCG GCGC CGATCGAGACCCCACTCAGACGAGG TTTTCTCAATTTCCT Nham_4092 53683 - 54978 + | integrase catalytic subunit Nham_4093 55992 - 55228 - | transposase, IS4 TERM 36 56195 - 56211 + H 78 -6.5 -4.67982 | overlap 56196 GCTGACGGTTTCACG TCTGGTC AAT GGCCAGG TTTTGTTGCATCGGC TERM 37 56699 - 56667 - H 93 -8.3 -5.31456 | gap 1, overlap 56685 CCAAGCCACAAAAAA CGCC-GTGCGGGCG TGAAAC CGCCAGCGCTGGCG GGGCGCGGCGAGGCG TERM 38 56700 - 56685 - H 71 -10.4 -3.53012 | overlap 56667 CGTGCGGGCGTGAAA CCGCCA GCGC TGGCGG GGCGCGGCGAGGCGA TERM 39 58351 - 58299 - H 100 -20 -5.20154 | gap 1, opp_overlap 58299 58301, overlap 58287 58300 58301 AGACAATCGAAAAAA GCCGATCGGAATGGGGTCACGATCG GCGC CGACCGTGACCCCACTCCGA-CGTA GATTCCGTTACTTGT TERM 40 58350 - 58300 - H 100 -23.5 -3.70465 | gap 1, opp_overlap 58299 58301, overlap 58287 58299 58301 GACAATCGAAAAAAG CCGATCGGAATGGGGTCACGATCG GCGC CGACCGTGACCCCACTCCGA-CGT AGATTCCGTTACTTG TERM 41 58349 - 58301 - H 100 -27 -2.81195 | gap 1, opp_overlap 58301 58299, overlap 58287 58300 58299 ACAATCGAAAAAAGC CGATCGGAATGGGGTCACGATCG GCGC CGACCGTGACCCCACTCCGA-CG TAGATTCCGTTACTT TERM 42 58301 - 58349 + H 100 -22.6 -2.57757 | gap 1, opp_overlap 58287 58300 58299 58301, overlap 58299 ACAATCGAAAAAAGC CGATCGGAATGGGGTCACGATCG GCGC CGACCGTGACCCCACTCCGA-CG TAGATTCCGTTACTT TERM 43 59463 - 59481 + H 71 -10.2 -3.52102 | CTGGCCTTTGGCGAC GGCGACCG AGA CCGTCGCC TTGTGTACATCCAGT TERM 44 60037 - 60027 - g 73 -8.2 -3.99013 | CAAAAAGCCGACAAA GCGG AAT CCGC AGCACGATTTGATGC Nham_4097 59805 - 60113 + | hypothetical protein TERM 45 60255 - 60231 - f 100 -14.3 -4.08394 | ACAGCGTCTCCAAAA TGGGCCACGAA CGA TCCGCGGCCCA TCAAAACGCACTTAT TERM 46 60535 - 60559 + F 82 -6.4 -4.8048 | gap 1 TTCTCGGACCAGATA GGCTCG-TGCG TCTC CGTAGCGGGCC TTTTTGGTGTGGCCC TERM 47 60664 - 60674 + F 87 -8.2 -4.82998 | opp_overlap 60654, overlap 60656 AACGAGCCCCGCCAT GCCC GGC GGGC TTTCTTTTGGTTTAG TERM 48 60750 - 60789 + F 72 -9.3 -3.64866 | opp_overlap 60717, overlap 60756 CCCACGCCCCGAACC CGATTAGGCCCGCTG TGCTCCCTTC CGGCGGGCCTTATTG TTTGGACTCTAATCT TERM 49 60756 - 60783 + F 75 -9.1 -4.09628 | opp_overlap 60717, overlap 60750 CCCCGAACCCGATTA GGCCCGCTG TGCTCCCTTC CGGCGGGCC TTATTGTTTGGACTC TERM 50 62450 - 62465 + F 72 -6.1 -4.37658 | overlap 62436 CGCATGGGCGGCGAG GAGCC GTCGCG GGCTC TTTTATAGGAACGTT TERM 51 62548 - 62577 + F 93 -11.4 -4.62069 | gap 1, opp_overlap 62534 CCCCGAACCCGATCA GGCCCGCCGTTGA TCCTT TC-CCGGCGGGCC TTTTTGGCGTGGCAG TERM 52 63553 - 63529 - f 73 -12.7 -2.76696 | opp_overlap 63525, overlap 63528 GCTCCGCCGAACAAG GCCGCGAGCGC CCG GCGCACCCGGC GCGTGTTGGTGCCGG TERM 53 64308 - 64358 + G 75 -11.9 -3.66178 | opp_overlap 64290, overlap 64310 64312 GGCACGAGCCTCGCC CTGC-TGGAACGTCGCCTCCGCCTT CTG AAGGCGAAGGCGG-GTCCCATGCTG TTTCAGCTTCCACCG TERM 54 64310 - 64356 + G 76 -13.1 -3.41222 | opp_overlap 64290, overlap 64308 64312 CACGAGCCTCGCCCT GC-TGGAACGTCGCCTCCGCCTT CTG AAGGCGAAGGCGG-GTCCCATGC TGTTTCAGCTTCCAC TERM 55 64312 - 64353 + G 77 -14.5 -2.86011 | gap 1, opp_overlap 64290, overlap 64310 64308 CGAGCCTCGCCCTGC TGGAACGTCGCCTCCGCCTT CTG AAGGCGAAGGCGG-GTCCCA TGCTGTTTCAGCTTC Nham_4101 64068 - 64772 + | hypothetical protein TERM 56 65026 - 65007 - f 83 -4.8 -5.09762 | GCCGAAGAAAGAAAA CGGACGCG TAGT CGAGACCG CAATCGAGGCACGAG TERM 57 65261 - 65293 + F 78 -7.8 -4.41348 | gap 1, opp_overlap 65265, overlap 65265 CGCGCTAGTTGTGAT CA-AACGGCTGGTCT TTAC AGATCAGCCGTGATG TTTGTTTCCAAGGAA TERM 58 65265 - 65288 + F 74 -13.2 -2.98607 | opp_overlap 65265, overlap 65261 CTAGTTGTGATCAAA CGGCTGGTCT TTAC AGATCAGCCG TGATGTTTGTTTCCA TERM 59 65288 - 65265 - f 78 -11 -3.73224 | opp_overlap 65261 65265 CTAGTTGTGATCAAA CGGCTGGTCT TTAC AGATCAGCCG TGATGTTTGTTTCCA Nham_4102 65770 - 66132 + | PRC-barrel TERM 60 66236 - 66271 + T 88 -10.4 -4.4648 | overlap 66237 66241 CCCCCCGTTCCACGC CCAGACCCGCCGGT TGCCTTTC GCCGGCGGGTTTGA TTTTGTCATGAAAGT TERM 61 66237 - 66270 + T 82 -13.9 -3.27406 | overlap 66236 66241 CCCCCGTTCCACGCC CAGACCCGCCGGT TGCCTTTC GCCGGCGGGTTTG ATTTTGTCATGAAAG TERM 62 66241 - 66266 + T 90 -11.1 -4.28487 | overlap 66237 66236 CGTTCCACGCCCAGA CCCGCCGGT TGCCTTTC GCCGGCGGG TTTGATTTTGTCATG Nham_4103 66712 - 66461 - | hypothetical protein Nham_4104 67234 - 66725 - | isoprenylcysteine carboxyl methyltransferase TERM 63 66885 - 66859 - G 76 -8.6 -4.11216 | opp_overlap 66860, overlap 66860 GCGCGAGCGGTAAAA CCGCGATCTCCG CGA CGACGATCGCGT AGTTGGGATGCGACA Nham_4105 68415 - 67231 - | chalcone and stilbene synthases-like TERM 64 67432 - 67421 - G 72 -4.4 -4.65895 | overlap 67423 TGGTCGAGCGAAAAA GATC GCTC GATC GCGATAATGACTTTC TERM 65 68078 - 68059 - G 74 -9.2 -3.85698 | opp_overlap 68046, overlap 68042 CGCGCCTTCCAGAAA GGCCTGAG TTCG CTCCGGCC AGCCACGCGGCTCGC TERM 66 68369 - 68341 - G 77 -13.1 -3.60296 | CACTCGTATCTGAAA CCGCGCAGCCGAC ACA ATCAGCCACGCGG CCCGACGCACACTGC Nham_4106 68915 - 68424 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Nham_4107 69317 - 69075 - | hypothetical protein TERM 67 70400 - 70420 + GH 73 -12.5 -2.74322 | overlap 70399 TAGCGCTGTTTCCCG CGACCGGCC AGC GGCCTGTCG ATTTCAGGAATTCGA Nham_4109 70218 - 70475 + | hypothetical protein Nham_4110 70445 - 71398 + | cation diffusion facilitator family transporter Nham_4111 72025 - 71561 - | hypothetical protein Nham_4112 72449 - 72006 - | hypothetical protein TERM 68 72172 - 72203 + g 76 -7.3 -4.25458 | overlap 72173 TCGGCGAGAAGGCTT TGTGCCGCCGA CCTGGCCGTC TTGGCGGCACG TTTCTTCATGGCATT Nham_4113 72934 - 72563 - | protein of unknown function DUF883, ElaB Nham_4114 73768 - 72935 - | hypothetical protein TERM 69 73677 - 73642 - G 78 -6.8 -4.66833 | gap 1, opp_overlap 73630 TCTGAACGCGAAAAA GCGCGATCTC-CTTGCG TTC CGCAAACGAGGACACGC CCGGACAACGGTTGA Nham_4115 73771 - 74031 + | transposase TERM 70 74092 - 74121 + F 81 -11.3 -3.84246 | overlap 74096 CGCGTCGGCGCTTGA ACGGCCCGCCGGT TGAA GCCGGCGGGTTGG TTTGCTCCTTCCCGC TERM 71 74096 - 74117 + F 88 -15.1 -3.59233 | overlap 74092 TCGGCGCTTGAACGG CCCGCCGGT TGAA GCCGGCGGG TTGGTTTGCTCCTTC TERM 72 74545 - 74590 + G 74 -9.8 -3.71527 | gap 2, opp_overlap 74569, overlap 74549 ACGAGGTTCCCCACA TCGATGACGCGCGGTTTCACCG AAGT CGGTGATCCCGC-CGTCGT-GA TTTGCCTACTTCCGG Nham_4116 74464 - 74946 + | hypothetical protein Nham_4117 75471 - 75034 - | transposase, IS4 Nham_4118 76864 - 75542 - | RNA-directed DNA polymerase (Reverse transcriptase) TERM 73 77217 - 77233 + r 100 -15.1 -3.86194 | CCCGTTGGATCGCTC GGCCGCC CAA GGCGGCC TTTGTCACGAGGCTT Nham_4119 77769 - 77293 - | transposase (IS12528) TERM 74 77378 - 77394 + g 73 -11.5 -3.54543 | GCGTCATAGCCGCGC GCCTCGC TAT GCGGGGC TTTGACCGACTGGCT TERM 75 78294 - 78280 - g 71 -12.8 -3.05963 | opp_overlap 78273 78266 AGGTGCATGTCAAGA GCCGGC AAT GCCGGC TGTGGCGCTCCCTTC TERM 76 78565 - 78613 + G 70 -7.4 -4.07687 | gap 2 GCGAGGAGAAGGTTT GCCGGCGCCTGATGAGCGTTCC TGGCGTC GGGCCGATCA-C-GGCGCTGGC TTTTCGGGCGACGAT Nham_4120 77856 - 78980 + | transposase IS116/IS110/IS902 TERM 77 79474 - 79487 + T 71 -8.1 -3.95424 | overlap 79483 ACATAATGGTCTGCC GGACG GACT CGTCC TTTGATGTTGGTAGT Nham_4121 79672 - 79502 - | hypothetical protein TERM 78 79775 - 79798 + r 78 -9.4 -4.09554 | overlap 79776 TTCAGGTAAGTGTCG CCGGCGGGGC TTCG GCCCCGCCAA TTCTCTTTTCTTGAT TERM 79 79776 - 79797 + r 76 -12.9 -3.04106 | overlap 79775 TCAGGTAAGTGTCGC CGGCGGGGC TTCG GCCCCGCCA ATTCTCTTTTCTTGA TERM 80 79829 - 79849 + r 95 -14 -4.02334 | opp_overlap 79829 GTCGCCGCACATTAA GGCCGCTC GTCCA GAGCGGCC TTTCTCATGTCACTC TERM 81 79849 - 79829 - R 82 -14 -3.25823 | opp_overlap 79829 GTCGCCGCACATTAA GGCCGCTC GTCCA GAGCGGCC TTTCTCATGTCACTC Nham_4122 81343 - 80231 - | putative transposase TERM 82 81256 - 81246 - G 76 -8.2 -4.14627 | overlap 81247 CGCTCAGACAAAGAA CGCG CCA CGCG ATGACGACGAACCTG Nham_4124 82237 - 82773 + | hypothetical protein Nham_4126 83063 - 83356 + | hypothetical protein TERM 83 83586 - 83610 + T 86 -6.3 -5.00616 | opp_overlap 83587, overlap 83587 CCGAGCTAGAAGGTA AGTTCGCCGAC AAC GTCGACGGACC TTTTTTAAGGCAGCG TERM 84 84149 - 84188 + T 84 -12.8 -3.7511 | gap 1, overlap 84152 ATGGGCTCTTTACCC TCCGCGGCTCGGCATTGCG GAT CG-AATGCCGCGCCGCTGC TTGTCTTCTAAAAAC TERM 85 84152 - 84185 + T 90 -17.5 -2.96991 | gap 1, overlap 84149 GGCTCTTTACCCTCC GCGGCTCGGCATTGCG GAT CG-AATGCCGCGCCGC TGCTTGTCTTCTAAA TERM 86 84845 - 84858 + T 71 -8.1 -4.08706 | ACGCTTGCACGCACG GGCTG TTTC CAGCC TTTATGTCATCGGCA Nham_4128 85646 - 85101 - | hypothetical protein TERM 87 86190 - 86203 + H 77 -2.3 -5.03747 | overlap 86191 GGGGCCCTCTTGTCA ATCGG TGAT CCGAG TTTTTTCCAAAGTTT Nham_4129 86335 - 86757 + | PRC-barrel TERM 88 86833 - 86865 + F 71 -7.5 -4.19238 | TCTGTTATGGACCTG CCGTCACCGGGACGG CCG CCGTAGTGGGGGCGG TTTTGAACTTCGGCA TERM 89 87793 - 87780 - g 84 -4.5 -5.20333 | overlap 87781 CACCCACAAGAAAAA CGAGC ACTG GCTCA AGGCCCACCCCAACG Nham_4130 86971 - 88041 + | putative transposase TERM 90 88207 - 88217 + G 76 -8.2 -4.14627 | overlap 88206 CAGGTTCGTCGTCAT CGCG TGG CGCG TTCTTTGTCTGAGCG Nham_4131 88120 - 89232 + | putative transposase TERM 91 90247 - 90269 + G 84 -15.6 -3.30124 | GGAGCGGATGCGCCG CCTGGTGGCG CGA CGCTACCAGG TTGTCCGGCATCGGA TERM 92 91094 - 91081 - g 100 -9.5 -5.00616 | opp_overlap 91082, overlap 91082 GCGCCCGCCAAAAAA GGCGC GCGG GCGCC TCAATCCGGCAAGGC Nham_4132 89882 - 91117 + | transposase IS116/IS110/IS902 TERM 93 92769 - 92753 - T 72 -5.1 -4.64676 | TCAGGGCCAACAAAA CACCG GGTTTAG CGGTG ACCTCTAATAAGAAC Nham_4136 94928 - 94080 - | hypothetical protein TERM 94 94301 - 94329 + g 70 -11.7 -3.12449 | opp_overlap 94301 94302 94303, overlap 94295 94304 GGCCACTGGCAAAAA TCGCGCGCAGCGT CGC ACGTTGCGCGTCA TCTATGTTGATCGGC TERM 95 94329 - 94301 - G 83 -7.3 -4.59773 | opp_overlap 94301 94295 94304, overlap 94302 94303 GGCCACTGGCAAAAA TCGCGCGCAGCGT CGC ACGTTGCGCGTCA TCTATGTTGATCGGC TERM 96 94304 - 94326 + g 78 -15.6 -2.76689 | opp_overlap 94303 94301 94302, overlap 94301 94295 CACTGGCAAAAATCG CGCGCAGCGT CGC ACGTTGCGCG TCATCTATGTTGATC TERM 97 94473 - 94488 + g 77 -2.5 -5.06816 | ATTTTGCTTCACCAC TTCCG GGGCAA CGGGA TTTTTCTTCGCGGCT Nham_4138 97702 - 96722 - | integrase catalytic subunit Nham_4139 97804 - 98853 + | transposase IS116/IS110/IS902 TERM 98 98951 - 98936 - T 90 -7.5 -5.08824 | GCCCTATCTAAAAAA CGGGC ATCACG GCCCG TACGATTTAATGGGA Nham_4140 99435 - 99034 - | transposase IS3/IS911 TERM 99 100074 - 100104 + H 95 -14.7 -3.70902 | gap 1, opp_overlap 100067 CGAGGAGATCGAGCG CCGCGCGCTGGCGC CGCT GC-CCAGCGCGCCG TTTGAGTATGCCGAA TERM 100 101571 - 101554 - g 76 -7 -4.45485 | ACGATACTGACAAAA TTGGCG GATCTG CGCCAA AACCTCAAAGCACCG TERM 101 103314 - 103326 + G 70 -10.5 -3.57144 | CGTTTCGGATATCGA GCGCG ACC CGCGC TTTGCCGATAACGAG Nham_4144 101188 - 103593 + | putative GAF sensor protein Nham_4145 103919 - 104608 + | hypothetical protein TERM 102 104648 - 104626 - f 100 -9.8 -5.40072 | opp_overlap 104626 CGCTGCCTAAAAAAA GTCCGTCGAC GTT GTCGGCGAAC TTACCTTCTAGCTCC Nham_4146 104727 - 105482 + | hypothetical protein Nham_4147 105750 - 105526 - | hypothetical protein Nham_4148 106152 - 106316 + | hypothetical protein Nham_4149 107389 - 106313 - | transposase, IS4 TERM 103 107791 - 107812 + r 75 -10.1 -3.65046 | overlap 107792 TCGGACTGGTTACTT TGGCGACTG AATC CGGTCGCCG TTATTGGGATGCACC Nham_4152 109673 - 109272 - | PRC-barrel TERM 104 109618 - 109651 + g 73 -8.9 -4.09108 | TCATAGACAGCCGTC CCCTCGACTTTATCG CTAG CGATCAAGTTGATGG TTTCTCTCACTTCAA TERM 105 111169 - 111199 + r 74 -6.7 -4.47217 | gap 1, overlap 111165 GACGTTTTCCACGCG CTCGCGCGGGCCGG TGGA CCG-CCAGCGCAGG TTTTGATTGATAGTT TERM 106 111732 - 111705 - R 100 -21.4 -3.8186 | opp_overlap 111708 111731, overlap 111708 GACCCTAATCAACAA CAACCCGCCCGA TGTA TCGGGCGGGTTG TCTAGGCTGAAAGCT TERM 107 111729 - 111708 - R 100 -17.3 -4.0342 | opp_overlap 111708, overlap 111705 CCTAATCAACAACAA CCCGCCCGA TGTA TCGGGCGGG TTGTCTAGGCTGAAA TERM 108 111708 - 111729 + r 95 -17.3 -3.50393 | opp_overlap 111708 111705 CCTAATCAACAACAA CCCGCCCGA TGTA TCGGGCGGG TTGTCTAGGCTGAAA Nham_4154 112012 - 111803 - | CsbD-like Nham_4155 112595 - 112224 - | response regulator receiver domain-containing protein TERM 109 112794 - 112806 + H 75 -9.1 -4.03413 | ACTGCAACATCCAGT GGCGA CCG TCGCC TTTATCTGGAAGGGT TERM 110 113376 - 113392 + H 79 -13.7 -3.04144 | overlap 113363 CGCCGGCTCGAATGC GGCCGAG TAT CTCGGCC TCTTCGCCGTGGCGA TERM 111 113555 - 113526 - H 73 -12.9 -2.71144 | gap 1, overlap 113504 GATCCTTGCTAATGA TCGCG-TCGTCCGA AGA TCGGACGATCGCGG CGAACTGCTCCGCAA TERM 112 115161 - 115179 + H 73 -12.4 -3.07816 | opp_overlap 115121 CAGCACGCGCCGCGC CGTCTCGG TCA CCGAGGCG TTGGCTGGCTCGACG TERM 113 115881 - 115860 - H 76 -2.9 -5.01732 | overlap 115877 AATGTCGCGAAAAAA CCCGGTGAC ACTA ATCATCAGG TCCGCCACCAGGGTG TERM 114 117608 - 117591 - H 81 -4 -5.10968 | opp_overlap 117592, overlap 117592 ATCAAGATACAAAAA GGCGCG GCTACT CGCGCT CACTTTGTCGAATTT Nham_4157 118362 - 118868 + | hypothetical protein TERM 115 118998 - 118982 - f 87 -4.3 -5.4505 | overlap 118966 118965 118984 GCTGCGAACAAAAAA GTCCGCG CCT CGAGAAC GCGACACTCCGACTT Nham_4159 119921 - 120301 + | hypothetical protein TERM 116 120357 - 120338 - f 91 -12.8 -4.04927 | overlap 120320 GCAATTAGCAAACAA CCGCCGGC TTCA ACCGGCGG GCCATTCATCAAGCG Nham_4160 120469 - 120702 + | hypothetical protein TERM 117 120715 - 120748 + T 78 -11 -3.65046 | opp_overlap 120735, overlap 120719 TAAGTCCTTGGTGTT TTTTGGTGGCCGGG AAGTCA TCCGGCCACCTGAA TTCTTGAGGTCGAGG TERM 118 120719 - 120744 + T 74 -14 -2.66106 | opp_overlap 120735, overlap 120715 TCCTTGGTGTTTTTT GGTGGCCGGG AAGTCA TCCGGCCACC TGAATTCTTGAGGTC Nham_4162 122012 - 121755 - | putative bacterioferritin TERM 119 123269 - 123291 + G 84 -15.6 -3.30124 | GGAGCGGATGCGCCG CCTGGTGGCG CGA CGCTACCAGG TTGTCCGGCATCGGA TERM 120 124116 - 124103 - g 100 -9.5 -5.00616 | opp_overlap 124104, overlap 124104 GCGCCCGCCAAAAAA GGCGC GCGG GCGCC TCAATCCGGCAAGGC Nham_4164 122904 - 124139 + | transposase IS116/IS110/IS902 TERM 121 126106 - 126094 - g 81 -10.5 -4.12188 | GGACGACCTCGAAAA CGCCG TCA CGGCG GACAGTCCAGCCATC TERM 122 126357 - 126327 - g 79 -9 -4.2243 | overlap 126328 ACAAATACGTCAAAA CCGACGCTGACG CTGCCGC CGTCAACGCCGA TATCGCGGACCCGAG Nham_4168 125468 - 127306 + | hypothetical protein Nham_4169 128101 - 127367 - | hypothetical protein TERM 123 127616 - 127588 - G 86 -7.3 -4.70659 | opp_overlap 127588 127582 127591, overlap 127589 127590 GGCCAGAGGCAAAAA TCGCGCGCAGCGT CGC ACGTTGCGCGTCA TCTATGTTGATCGGC TERM 124 127588 - 127616 + g 70 -11.7 -3.12449 | opp_overlap 127588 127589 127590, overlap 127582 127591 GGCCAGAGGCAAAAA TCGCGCGCAGCGT CGC ACGTTGCGCGTCA TCTATGTTGATCGGC TERM 125 127591 - 127613 + g 78 -15.6 -2.76689 | opp_overlap 127590 127588 127589, overlap 127588 127582 CAGAGGCAAAAATCG CGCGCAGCGT CGC ACGTTGCGCG TCATCTATGTTGATC TERM 126 127704 - 127718 + g 74 -5.6 -4.4078 | overlap 127706 TTTTGCTTCGCGGTC TCCCCG CCT CCGGGA TTTTGCTTGGCGGCG Nham_4170 128195 - 128395 + | hypothetical protein Nham_4172 129198 - 128836 - | ISSpo6, transposase orf A TERM 127 130328 - 130349 + r 71 -10.1 -3.50572 | opp_overlap 130320 ACAATATGCGCGGCG GGCCTCATC ACAT GACGAGGCC TTGTGTCAGCTCCAT Nham_4174 132710 - 130521 - | hypothetical protein Nham_4175 134859 - 133078 - | glycoside hydrolase 15-related TERM 128 133430 - 133403 - G 72 -4.1 -4.65747 | TAACGCCGAACAAAA CCATCAACCAG CAAGTC CCGCTCGATGG CTTCGACAGTGGCAC Nham_4176 135923 - 134928 - | short chain dehydrogenase Nham_4177 136284 - 135943 - | Caa(3)-type oxidase, subunit IV Nham_4178 136916 - 136281 - | cytochrome c oxidase, subunit III Nham_4179 138586 - 136913 - | cytochrome c oxidase, subunit I Nham_4180 139527 - 138583 - | cytochrome c oxidase, subunit II TERM 129 138854 - 138878 + g 74 -4.9 -4.56775 | opp_overlap 138869, overlap 138857 CAACCAGAGCAACCC CGCGCGCGA AAGACAG TCGCGCCTG TTTTTGCCAGGCCGT TERM 130 139058 - 139011 - G 74 -2.7 -4.88711 | gap 3, opp_overlap 139013 139042, overlap 139012 139013 AGAACAGATGAAAAA CGCCGGGTTTGGT-CGCTCGAAAC CAG GTTTCG-GTGTACCGG-CCCGGCA GGACATCTTTTTTCA TERM 131 139042 - 139065 + g 88 -3.8 -5.26875 | gap 1, opp_overlap 139012 139011 139064 TCGAAACCAGGTTTC GGTGTACCGGC CCG GCAGG-ACATC TTTTTTCATTCGGAA TERM 132 139131 - 139096 - G 80 -4.9 -4.8622 | gap 2, overlap 139064 139099 139125 CGCCGGAACGAAAAA CGAGT-GT-ATGACGTC TTCG GACGTCATAACGAGTCG CACCGGCGTGTCGAG Nham_4181 140315 - 139527 - | hypothetical protein TERM 133 140331 - 140344 + r 71 -8.1 -3.96483 | opp_overlap 140295 GGCGACTGTCCTCCG CCTGC ACCG GCAGG TTGTTTGGCTGAAGT Nham_4182 140704 - 140312 - | hypothetical protein TERM 134 140512 - 140522 + g 71 -4.6 -4.41348 | GCAGCCTGGCAAGAT CGGC GGC GTCG TTTGTTTGAAGCCGC Nham_4183 141740 - 140694 - | hypothetical protein Nham_4184 142258 - 141737 - | hypothetical protein Nham_4185 142779 - 142255 - | hypothetical protein TERM 135 142307 - 142323 + g 74 -10.1 -3.81414 | overlap 142309 TGCTTCAACAGCTTG CGGAGCG AGG CGCTTCG TTCTTCCTTGCCGGT TERM 136 142525 - 142503 - G 71 -5.5 -4.32034 | gap 1, opp_overlap 142515, overlap 142504 GCACGAGGAGGAAAA CCGGCCAGCT ATTG AGC-GGCCGT CCGCCCGTGTTGAGC TERM 137 142604 - 142586 - G 74 -5.2 -4.58419 | overlap 142588 AGAAAATAGAAGAAA GCGGCC ATCGCCA GACCGC CAACCAACATCGAAA Nham_4186 144146 - 142776 - | polysulphide reductase, NrfD Nham_4187 146986 - 144143 - | 4Fe-4S ferredoxin, iron-sulfur binding Nham_4188 147639 - 146983 - | chaperone protein HtpG Nham_4189 148109 - 147732 - | hypothetical protein TERM 138 149542 - 149527 - g 74 -6.2 -4.49556 | overlap 149523 CGTGGACTAAAGAAA TTGAGA GCAA TCTCAA GTCCTGGTGGCAGAC Nham_4190 148434 - 150281 + | pyruvate decarboxylase Nham_4191 150283 - 151377 + | mandelate racemase/muconate lactonizing enzyme Nham_4192 151387 - 152391 + | hypothetical protein Nham_4193 152384 - 153040 + | hypothetical protein Nham_4194 153030 - 154676 + | glucose-methanol-choline oxidoreductase Nham_4195 155916 - 154933 - | hypothetical protein Nham_4196 156349 - 156134 - | hypothetical protein TERM 139 156240 - 156256 + g 79 -13.7 -3.46081 | CTTGCCGTGGCAACC GCCGCCT CAA AGGCGGC TTCCTTAGTTGCGTA Nham_4197 156659 - 157414 + | hypothetical protein TERM 140 157976 - 157995 + G 71 -4.9 -4.41047 | overlap 157966 157977 157986 GAGGATCTGCGGGTT GCCACCG ACGCGC CGGTGGA TTTTGCTTCCGGCGT Nham_4198 157592 - 159367 + | ABC transporter related Nham_4199 159389 - 159700 + | hypothetical protein TERM 141 160406 - 160362 - gf 95 -18.1 -2.54193 | GAGGACCTGAAGGCA CGTGCCGGA-GCCGTCTCGCA TAGCG TGCGAGA-GGCTTCCGACACG CTAAAGGCCGAACTT Nham_4200 159663 - 160508 + | hypothetical protein TERM 142 161488 - 161450 - f 76 -13 -3.09492 | CCCGCAATCCGAACA CGGCCACGAGCGCCGCGA TCG TCGCGCCGATCACGGTCG AGGGATCGGCATAGG Nham_4202 161763 - 161915 + | conjugal transfer TraD TERM 143 162558 - 162545 - T 87 -9.5 -4.64861 | TCGGGCTAAAACAAA CCCGC CGGC GCGGG AATGAGCACGGACGG TERM 144 162723 - 162696 - T 100 -12.7 -4.72272 | opp_overlap 162722 GGGCCCCACCAAAAA GGCCCGCCG GAAGGAGCAA CGGCGGGCC TGATCGGGTTCGGGG TERM 145 162873 - 162891 + T 93 -17.4 -3.26947 | opp_overlap 162873 TTCTATAATGGAAAA GGCCGCCC AGT GGGCGGCC TTCATGTAAGGGTTA TERM 146 162891 - 162873 - T 100 -17.4 -4.3208 | opp_overlap 162873 TTCTATAATGGAAAA GGCCGCCC AGT GGGCGGCC TTCATGTAAGGGTTA Nham_4203 163258 - 162926 - | hypothetical protein TERM 147 163141 - 163169 + g 70 -10.1 -3.61398 | overlap 163144 GGTTCGGCGTGTTTG CGGGCGCCGGTGG ACG CCCCTGGCGCATG TTATTAGGGGCCGCC Nham_4204 163802 - 163605 - | hypothetical protein TERM 148 163919 - 163895 - H 87 -7.8 -4.8048 | CGGCTACATCAAAAA GGCCCACC GTGGGGGCT GGCGGGCC TAATCGGGACCGGGA Nham_4205 163937 - 164239 + | hypothetical protein Nham_4206 164866 - 165249 + | hypothetical protein TERM 149 166637 - 166656 + G 93 -7.2 -5.20781 | gap 1, opp_overlap 166641 GGTTCAAGACTCCGA CCAA-CCCA CGC TGGGCTTGG TTTTATTTTCTGATG TERM 150 167820 - 167794 - g 79 -9.4 -4.19624 | opp_overlap 167794 GATGGTGAAGACAAA CACTTCGTCGTC GAT GGCGATGAAGTG TTCATCCATGGTAGA TERM 151 167794 - 167820 + G 76 -13.8 -3.19463 | opp_overlap 167794 GATGGTGAAGACAAA CACTTCGTCGTC GAT GGCGATGAAGTG TTCATCCATGGTAGA Nham_4209 166276 - 168171 + | signal transduction histidine kinase Nham_4211 168526 - 168855 + | transposase IS3/IS911 TERM 152 169339 - 169370 + G 76 -13.6 -3.22298 | CCCGCAGGATCGTGG GTTGGCGAGCGTCG CGCA CGGCGCACGCCGGC TTCGTGCTCGATGCG Nham_4212 168852 - 169757 + | integrase catalytic subunit TERM 153 171281 - 171291 + G 76 -6.8 -4.42594 | overlap 171270 TCTGCCGGCGCTTTG TCCG GCC CGGA TTTCTGTTTCATTTG Nham_4213 170305 - 171327 + | DEAD/DEAH box helicase-like Nham_4214 171324 - 171569 + | hypothetical protein Nham_4215 172269 - 171874 - | transposase, IS4 Nham_4216 172634 - 172266 - | IS5 family transposase OrfA Nham_4218 174231 - 173269 - | ErfK/YbiS/YcfS/YnhG TERM 154 174064 - 174076 + g 74 -10.5 -3.70081 | overlap 174066 CTGGGCCTCTTCGTA GGCGC GCA GCGCC TTCTTCGCGTTCTCT Nham_4219 176631 - 174652 - | glycosyl transferase family protein Nham_4220 177800 - 176631 - | hypothetical protein TERM 155 177265 - 177295 + g 71 -13.2 -3.04792 | opp_overlap 177265 177276 TCGTAGCCGTGGAAA CCGCCGCGAAAGCC CTC GGTTTCGGCGGCGG TGTTGCGGATGATCC TERM 156 177295 - 177265 - G 77 -13.2 -3.54424 | opp_overlap 177265, overlap 177276 TCGTAGCCGTGGAAA CCGCCGCGAAAGCC CTC GGTTTCGGCGGCGG TGTTGCGGATGATCC Nham_4221 179128 - 177854 - | hypothetical protein Nham_4222 179568 - 179281 - | hypothetical protein Nham_4224 180959 - 181384 + | hypothetical protein Nham_4225 181597 - 181358 - | hypothetical protein TERM 157 181518 - 181503 - G 73 -6.8 -4.26903 | gap 1 CGTACGTCAGCAAAA CG-GCGC AAG GCGCGCG GGAGAGCCTCAGATA Nham_4226 181966 - 181673 - | hypothetical protein Nham_4227 182076 - 182348 + | hypothetical protein Nham_4228 182551 - 183174 + | hypothetical protein TERM 158 183487 - 183516 + F 76 -2.9 -4.94058 | gap 2, opp_overlap 183487 183491 TCGGGAGGGAGCCAA GC-CA-CGCCGAG CGGAGA CTTGGCGCTGAGC TTTTGTTTCGCTTCA TERM 159 184358 - 184345 - f 71 -8.1 -4.08706 | TCCCGATGACATAAA GGCTG GAAA CAGCC AGTGCGTGCAAGCGT Nham_4230 184583 - 184969 + | hypothetical protein Nham_4232 186158 - 186760 + | cupin 2, barrel Nham_4233 186757 - 187104 + | hypothetical protein TERM 160 187380 - 187350 - g 70 -11.8 -3.14132 | gap 1, opp_overlap 187357 CGGCGCGGGCAGCAA GCGGCGGCGCTGG ACGCGG CCGGCGCCGC-GC TGGGCGCGCTCGGGA Nham_4234 187101 - 187535 + | hypothetical protein Nham_4235 188663 - 187560 - | putative transposase TERM 161 188576 - 188566 - G 76 -8.2 -4.14627 | overlap 188567 CGCTCAGACAAAGAA CGCG CCA CGCG ATGACGACGAACCTG TERM 162 188760 - 188774 + H 84 -7 -4.78077 | overlap 188762 CAACTCGGCACTCTT GGGACG GGG CGGCCC TTTCTTTTGATTAGG Nham_4236 188867 - 189268 + | hypothetical protein Nham_4237 189336 - 189917 + | hypothetical protein TERM 163 190106 - 190084 - f 82 -13.4 -3.24329 | overlap 190082 CAGCCTCAACCAAGA CGACGCGCGA TTC TCGCGTGTCG AAGTTGCGCCAATCG Nham_4240 191453 - 191764 + | hypothetical protein TERM 164 192696 - 192683 - g 84 -4.5 -5.20333 | overlap 192684 CACCCACAAGAAAAA CGAGC ACTG GCTCA AGGCCCACCCCAACG Nham_4241 191874 - 192944 + | putative transposase TERM 165 193550 - 193562 + G 78 -6.9 -4.59773 | ACCGTGAATGCGATT GCGCG CGG CGTGC TTTTTGGGGGTCGCC Nham_4242 193016 - 193624 + | hypothetical protein TERM 166 193818 - 193799 - f 83 -5 -5.03715 | overlap 193801 AGCAGCGGTAAAAAA TCCGTACG GTAT CGTACAAA ATTCGGAACTCGGAC TERM 167 194369 - 194359 - g 80 -4.6 -4.8543 | CAATTTTGATAAAAA GAGC TTC GCCC AACTTGGCCCGGACG Nham_4243 193901 - 194659 + | twin-arginine translocation pathway signal TERM 168 196360 - 196344 - g 71 -13.7 -2.57881 | opp_overlap 196359, overlap 196332 196343 GAATCCCGGTACAAC CCGACCG GAA CGGTCGG CGCCCTCGCCTATTG Nham_4244 194641 - 196407 + | putative gluconate dehydrogenase Nham_4245 196517 - 197692 + | cytochrome c, class I TERM 169 198008 - 197998 - f 74 -2.4 -5.00884 | ATTCTGGTCAAAAAA GCCC TGT GGTC CAGAAGAACGCTCCC Nham_4246 198230 - 198487 + | hypothetical protein Nham_4247 198595 - 199074 + | transposase, IS111A/IS1328/IS1533 TERM 170 199345 - 199331 - f 90 -7.1 -5.13722 | TCGACGAAAACAAAA TGCCG GACGG CGGCA TAGACTTCCACGGCA TERM 171 200170 - 200146 - f 76 -2.8 -5.00339 | overlap 200148 ATGAACAATTAAAAA GAGCATTTGG CCCTT CGAAATGCGC CCGTTAACTGATCAG TERM 172 200287 - 200299 + F 82 -9.1 -4.55128 | opp_overlap 200286 200287 AGAAAGGTTTCAAAT CGAGG CCC CCTCG TTTTCATTTGACCCT Nham_4251 202172 - 202525 + | hypothetical protein Nham_4252 202546 - 202869 + | hypothetical protein TERM 173 203905 - 203917 + F 82 -6.2 -4.86621 | opp_overlap 203882 203883, overlap 203902 GATGGGAACATTCGG CGCG CTTGC CGCG TTTTTCCTTCCCAAT Nham_4254 203950 - 204327 + | PRC-barrel TERM 174 204694 - 204718 + T 78 -4.3 -4.90778 | gap 1, overlap 204697 ATGAGTGGCGGATGA CGTTCGCGTG AATATC CACGCG-ATG TTTTATTTCCCTAAG TERM 175 204697 - 204716 + T 78 -9.3 -4.07285 | overlap 204694 AGTGGCGGATGACGT TCGCGTG AATATC CACGCGA TGTTTTATTTCCCTA TERM 176 204967 - 204930 - T 82 -10.5 -4.15044 | opp_overlap 204961 TGGGGTCGTAACAAA GTTCGGCGAGCAGCTTC CGAT GAAGCGGCCCGGCCAAC CCGCCGACTCGGCGA TERM 177 205520 - 205510 - T 76 -6.8 -4.45664 | TTAAGCGAAGCAAAA GCCA CCA TGGC GAAATAAGATCAGGG Nham_4256 206174 - 205920 - | hypothetical protein TERM 178 206107 - 206126 + g 100 -7.8 -5.47159 | ACTATTGATTTTAAT GGCTCTGT TTCG ACGGGGCC TTTTTTCTGTTCGGC Nham_4257 206966 - 206676 - | hypothetical protein Nham_4259 207381 - 207599 + | hypothetical protein TERM 179 207852 - 207865 + F 79 -5.2 -4.72497 | AGGGCGAGTTCGGGG CCGC GTGGGA GCGG TTTTATTCGTCCCTG Nham_4261 208201 - 209250 + | transposase, IS4 Nham_4262 209813 - 210907 + | tISRso5; ISRSO5-transposase protein TERM 180 210910 - 210938 + F 84 -2.4 -5.42259 | gap 1, overlap 210911 210912 TTCCATCCACTAGGT TAGGAGC-AGCGT CAAG ACGTTGGCTCCGG TTTTTTTGCCGATGG Nham_4263 211021 - 211476 + | hypothetical protein Nham_4264 212259 - 211504 - | transposase, IS4 TERM 181 211682 - 211670 - G 76 -6.9 -4.4891 | GGGAGGACGACAAAA CCGAC CTG GCCGG CAATCTTCCGCACAA TERM 182 212433 - 212454 + H 100 -5.7 -6.17669 | opp_overlap 212436, overlap 212435 212436 CTAAGCCCCAATAGA AAACCCCGC CGGA GCGGGGCTA TTTTTTTCTTTTCTT TERM 183 212435 - 212452 + H 83 -8.3 -4.67109 | opp_overlap 212436, overlap 212433 212436 AAGCCCCAATAGAAA ACCCCGC CGGA GCGGGGC TATTTTTTTCTTTTC TERM 184 212436 - 212451 + H 76 -11.8 -3.36605 | opp_overlap 212436, overlap 212435 212433 AGCCCCAATAGAAAA CCCCGC CGGA GCGGGG CTATTTTTTTCTTTT TERM 185 212451 - 212436 - H 100 -11.8 -4.66938 | opp_overlap 212436 212435 212433 AGCCCCAATAGAAAA CCCCGC CGGA GCGGGG CTATTTTTTTCTTTT Nham_4265 213892 - 214401 + | antirestriction protein TERM 186 214719 - 214746 + T 77 -7.7 -4.33165 | gap 1, overlap 214740 CAATGCGAGGAAGAG CCGTCAGTGCCC ATAAC GGG-GCTGGCGG TTTTCGTCCGTTTGG Nham_4266 215150 - 214722 - | hypothetical protein Nham_4267 215578 - 215997 + | hypothetical protein TERM 187 216032 - 216046 + F 85 -9.2 -4.50976 | opp_overlap 216032, overlap 216013 GCCAGAGGCACGAGA CCCCCG ACA TGGGGG TTTTCTCGTCTGGCG TERM 188 216191 - 216221 + F 75 -10.4 -3.65046 | opp_overlap 216191, overlap 216177 GCCCGGGCAGCATAA GCGGCCCCGG TTGCTCCTTTC CTGGGGCCGC TTATTCACGTCGAAC TERM 189 218244 - 218272 + G 73 -12.6 -3.17723 | opp_overlap 218246 218252, overlap 218252 GTTGCTCGCGCTAAC GAGGAAAATCGG AAATA CCGATTTTTCTC TTCCGTTGCGGATGC TERM 190 218252 - 218264 + G 86 -4.8 -5.1167 | opp_overlap 218246 218252, overlap 218244 CGCTAACGAGGAAAA TCGG AAATA CCGA TTTTTCTCTTCCGTT Nham_4268 217327 - 218319 + | transposase, IS4 Nham_4269 220859 - 218529 - | hypothetical protein Nham_4270 221284 - 220856 - | hypothetical protein TERM 191 221368 - 221344 - H 89 -17.2 -3.06671 | overlap 221361 AGACGGAGCCGAATA GGCCGGCATC GATGA GATGCCGGCC TGAGCACGACAGCGC TERM 192 221387 - 221405 + H 81 -11.7 -3.63968 | opp_overlap 221380 GCACGACAGCGCTTC CGGCTGC GCTCA GCAGCCG TTTCCCGGTTTGGCC TERM 193 221565 - 221595 + H 79 -14 -3.13432 | opp_overlap 221575, overlap 221573 221576 AAGGCTTCGCCTGAT TGCGGCAATACCGC AAT GTGGCATTGCCGCG TTGCGTCATGTTGGG TERM 194 221576 - 221600 + H 80 -14.3 -2.76046 | opp_overlap 221575, overlap 221565 221573 TGATTGCGGCAATAC CGCAATGTGGC ATT GCCGCGTTGCG TCATGTTGGGATTGC Nham_4271 221881 - 222570 + | cobyrinic acid a,c-diamide synthase Nham_4272 222567 - 222980 + | hypothetical protein Nham_4273 224455 - 223271 - | esterase, PHB depolymerase Nham_4274 224900 - 224460 - | CopG family transcriptional regulator TERM 195 224897 - 224912 + g 76 -9 -3.9777 | overlap 224898 CAACATCCATTTTTA CCATCC AACA GGATGG TTTGTGGATGTTAGC Nham_4275 224914 - 225297 + | hypothetical protein TERM 196 226076 - 226043 - g 100 -13.8 -5.07486 | GATCGGCAAGAAAAA TCGGGCCGACCGCG GGCTCG CGCGGCAGACCCGA TCGCGAAAACTTCCT Nham_4277 225726 - 226097 + | putative transcriptional regulator Nham_4278 226902 - 226174 - | single-strand binding protein/primosomal replication protein n Nham_4279 228356 - 227124 - | replication protein C TERM 197 228468 - 228507 + r 93 -13.6 -3.83154 | overlap 228473 AATCGCCAAAGAGAT GAGAGGGCTTCCGGGACG GTGA CGTTTCGGGGGCCTTTTC TTTGCCTTATGATTC TERM 198 228473 - 228502 + r 100 -12.1 -4.94962 | overlap 228468 CCAAAGAGATGAGAG GGCTTCCGGGACG GTGA CGTTTCGGGGGCC TTTTCTTTGCCTTAT Nham_4280 229626 - 228625 - | RepB plasmid partition Nham_4281 230849 - 229626 - | cobyrinic acid a,c-diamide synthase TERM 199 230029 - 230015 - G 73 -7 -4.26076 | opp_overlap 230018, overlap 230016 GCACTGGGATCAAAA GCGCTG TCG CGGCGC AGAGCGCCGACAGTG TERM 200 231456 - 231467 + r 71 -7.2 -4.25104 | overlap 231453 CCCTGCCCGTCTCGT CCGC GACG GCGG TTTTGGTGCGGCCGA Nham_4283 232579 - 232256 - | hypothetical protein TERM 201 232317 - 232359 + g 71 -13.4 -2.62983 | gap 1, opp_overlap 232337, overlap 232322 TTCGCCGCACCCGGC CCGGTCGGCGCCGGCACGA AGGCGC TCGTGC-GGCGCCATTCGG TGATCTGCAGATCGG Nham_4284 233089 - 232652 - | prevent-host-death protein Nham_4285 233364 - 233086 - | hypothetical protein Nham_4286 233661 - 233422 - | hypothetical protein Nham_4287 234985 - 233663 - | TniB Nham_4288 236609 - 234966 - | integrase catalytic subunit Nham_4289 236720 - 237670 + | hypothetical protein TERM 202 238077 - 238051 - f 77 -12.3 -3.60098 | gap 1 ATCGCCGACGGCAAA CCCGACTGGGCG CTGT CGCC-AGCCGGG CTCGCCGGCTTGCGC TERM 203 239068 - 239012 - g 74 -5.8 -4.39166 | opp_overlap 239033 239036, overlap 239033 239035 TTTCAGACATGAAAA GCGACTCACCCGATCTGAAAACAG-CGA TGC TCGGCCGCATCC-GTGCGGATGAGCCGC GCAAGGTTTGGACAC Nham_4291 238963 - 239832 + | hypothetical protein TERM 204 240402 - 240370 - g 74 -6.1 -4.4078 | GGGCGGCAATCAAAA TCGAGTCGGGTGCGA AGT CCGCGCTAGACCCGA ACAGCGAAGTGCCGA Nham_4292 239874 - 240908 + | hypothetical protein Nham_4293 241063 - 241830 + | hypothetical protein TERM 205 241960 - 242014 + F 100 -13.7 -5.20154 | gap 1, opp_overlap 241960 241965, overlap 241961 241972 TGACAAGTAACGGAA TCTAAGTCGGAGTGGGGTCACGGTCG GTGC CGATCGTGACCCCATTCTGA-TCGGC TTTTTTCGATTGTCT TERM 206 241961 - 242013 + F 100 -17.2 -3.70465 | gap 1, opp_overlap 241960 241965, overlap 241960 241972 GACAAGTAACGGAAT CTAAGTCGGAGTGGGGTCACGGTCG GTGC CGATCGTGACCCCATTCTGA-TCGG CTTTTTTCGATTGTC TERM 207 242010 - 241965 - f 86 -14.7 -3.21258 | opp_overlap 241961 241960 241972, overlap 241960 AGTAACGGAATCTAA GTCGGAGTGGGGTCACGGTCG GTGC CGATCGTGACCCCATTCTGAT CGGCTTTTTTCGATT TERM 208 241972 - 242003 + F 100 -21 -3.43689 | opp_overlap 241965 241960, overlap 241961 241960 GAATCTAAGTCGGAG TGGGGTCACGGTCG GTGC CGATCGTGACCCCA TTCTGATCGGCTTTT TERM 209 243088 - 243110 + G 84 -15.6 -3.30124 | GGAGCGGATGCGCCG CCTGGTGGCG CGA CGCTACCAGG TTGTCCGGCATCGGA TERM 210 243935 - 243922 - g 100 -9.5 -5.00616 | opp_overlap 243923, overlap 243923 GCGCCCGCCAAAAAA GGCGC GCGG GCGCC TCAATCCGGCAAGGC Nham_4296 242723 - 243958 + | transposase IS116/IS110/IS902 Nham_4297 245107 - 243977 - | transposase, mutator type Nham_4298 245449 - 245697 + | hypothetical protein TERM 211 245746 - 245771 + F 76 -11.7 -3.34895 | overlap 245734 CCGGCGGCCCAACTC GGCCCGCTTCC TGCC GGCCGCGGGCC TTCCTTGAAGATAGC TERM 212 245910 - 245891 - f 79 -12.8 -3.39521 | opp_overlap 245891, overlap 245886 CCGACGAAAACTTAA GCCCGCCC CGAG AGGCGGGC TTTTTTGCTGCCGCG TERM 213 245891 - 245910 + F 100 -12.1 -5.14563 | opp_overlap 245891 245886 CCGACGAAAACTTAA GCCCGCC CCGAGA GGCGGGC TTTTTTGCTGCCGCG TERM 214 246021 - 246046 + F 100 -15.4 -4.7254 | TCCCGGTTCCGATTA GGCTCGCCGC TCCTCC GCGGCGGGCC TTTTTGGTGGCCAAT TERM 215 246144 - 246174 + F 71 -10.3 -3.61715 | gap 1, overlap 246145 TGATGGGCAGCCCGC CGCCGCGCACCGCG CTCC CGCGG-GCGCTGCA TTCTTGCCACCGCTC TERM 216 246145 - 246173 + F 76 -13.8 -2.76815 | gap 1, overlap 246144 GATGGGCAGCCCGCC GCCGCGCACCGCG CTCC CGCGG-GCGCTGC ATTCTTGCCACCGCT TERM 217 246850 - 246795 - f 83 -15.5 -2.72379 | gap 1 CGAACTCGCCAAGCA CCGCGCC-TGCATCCGATGCGGGG GTACTGATT CCCCACATCGGATGCGCGACGAGG AGAGAGTGAACGTAA Nham_4299 247723 - 248316 + | transposase TERM 218 248624 - 248664 + F 71 -8.2 -4.00934 | gap 1, opp_overlap 248619 248638 248651 GAGAATCGAAGGTTC GGCCGCG-AACGAGATTGC CTGG GCAAACGCGATGCGCGGTC TTTCATCTTTCACAT TERM 219 249421 - 249434 + G 90 -8.1 -4.84359 | GAAGTCATGATTGAG CGCCT CGTG AGGCG TTTTTATCGAGGTGC Nham_4300 249385 - 249780 + | hypothetical protein Nham_4301 249773 - 250108 + | alkylhydroperoxidase AhpD core Nham_4303 251198 - 250545 - | oxidoreductase FAD/NAD(P)-binding TERM 220 251555 - 251542 - H 70 -3.7 -4.65895 | overlap 251543 CTCGCCATTCAAAAA GCCAG CTCA CAGGC CTGGGCGCGACTCTT Nham_4305 251616 - 252239 + | hypothetical protein Nham_4306 252276 - 252863 + | hypothetical protein TERM 221 252883 - 252871 - f 75 -10.5 -3.67597 | GCTCGTAGCGAACAA CGGCG TGG CGCCG AGCACGAGGAGCCGC TERM 222 253905 - 253884 - f 77 -8 -4.2558 | gap 1 CATGTTGGATTAAAA GCGG-GCCA TGCTG TGGCGCCGC GGCGTCATCCGCGCA Nham_4307 253941 - 254660 + | hypothetical protein Nham_4308 254657 - 255172 + | hypothetical protein Nham_4309 255555 - 255175 - | hypothetical protein Nham_4310 256164 - 255664 - | heat shock protein Hsp20 TERM 223 256188 - 256219 + r 75 -9.4 -3.92542 | gap 1, opp_overlap 256187 256191, overlap 256189 256192 TCTCCTCGATTCAAG C-GACTTCCGCCGCG AAC CGCTGCGGAAATCTG TTCTTTGCCGATGCG TERM 224 256189 - 256217 + r 81 -13.1 -3.55202 | opp_overlap 256187 256191, overlap 256188 256192 CTCCTCGATTCAAGC GACTTCCGCCGCG AAC CGCTGCGGAAATC TGTTCTTTGCCGATG TERM 225 256192 - 256214 + r 74 -13.4 -2.60309 | opp_overlap 256191 256187, overlap 256189 256188 CTCGATTCAAGCGAC TTCCGCCGCG AAC CGCTGCGGAA ATCTGTTCTTTGCCG Nham_4311 256711 - 256250 - | heat shock protein Hsp20 Nham_4312 257711 - 257283 - | PilT protein-like Nham_4313 257962 - 257708 - | hypothetical protein Nham_4314 258081 - 258587 + | hypothetical protein TERM 226 258732 - 258745 + T 100 -9.5 -5.00616 | opp_overlap 258693, overlap 258693 GCCTTGCCGGATTGA GGCGC CCGC GCGCC TTTTTTGGCGGGCGC Nham_4315 259944 - 258709 - | transposase IS116/IS110/IS902 TERM 227 259579 - 259557 - G 84 -15.6 -3.30124 | TCCGATGCCGGACAA CCTGGTAGCG TCG CGCCACCAGG CGGCGCATCCGCTCC TERM 228 261354 - 261388 + H 100 -18.5 -3.06261 | GAGTCCTGCGAGCCG CGGCGCATCGCGCGC ATCGG GCGCGCGCTGCGCCA TCTTAAAGGTTAAAG TERM 229 261538 - 261497 - g 88 -8.1 -4.8048 | gap 1, opp_overlap 261507, overlap 261479 261533 GCCGTACAGCAAAAA GCTGGACGCG-CAGGC GCTTGCCTATT GCCTAACGCATCCAGC GGCTGCAAAGGCGGC Nham_4317 261465 - 261704 + | hypothetical protein TERM 230 261710 - 261731 + F 76 -2.9 -4.88228 | gap 1 CGCCGCGTGAGTGCG GGCG-GATCA GAC TGGGCACGCC TTTTTCGTATTGCCT Nham_4318 261831 - 262079 + | hypothetical protein Nham_4320 263089 - 262796 - | hypothetical protein TERM 231 263938 - 263969 + G 70 -10 -3.55444 | overlap 263936 263955 GGATGGCGGTGGTGC CGCTGGCGGCGCTG CTGC TGGCGCTGGCGGCG TTTGCCCGCTCGGCG TERM 232 264487 - 264515 + G 76 -6 -4.56597 | gap 1 CGGCGCTGGTGCTGG GTCTGTCG-CACT GGCT GGTGGCGGCGGAC TTTTTCCACAAGCAG Nham_4321 263298 - 264995 + | NADH/ubiquinone/plastoquinone (complex I) TERM 233 265453 - 265469 + G 70 -7.2 -3.96624 | overlap 265442 265442 TCGGCCCGGCCTGGC CGCGCC TGACC GGCGTG TTTGTGGTGGCGCTG Nham_4322 265002 - 265763 + | hypothetical protein TERM 234 265781 - 265822 + G 77 -4.2 -4.83615 | gap 1 CTCGGGCGGCGTCTG CGGGTGC-GCTCGACCGCC TACGT GGCGGGTGAGCCGGTGCCG TTTTTCTGGCCGATG TERM 235 266705 - 266670 - g 74 -10.3 -3.72576 | gap 1, opp_overlap 266697 CGCTGCTGCAGGAAA GCGCGCGCCATCGCCG TACGC CGGTG-CGGCGCGAGC AGCTCGACGCCTTGC Nham_4323 265742 - 268861 + | hypothetical protein TERM 236 269097 - 269109 + G 91 -9.1 -4.65895 | overlap 269088 CGATCCGCTGCTCGA CGGCT TTC AGCCG TTTTTCGATGCCCAC Nham_4324 268858 - 269184 + | nitrogen regulatory protein P-II (GlnB, GlnK) TERM 237 270857 - 270888 + G 70 -10 -3.55444 | overlap 270855 270874 GGATGGCGGTGGTGC CGCTGGCGGCGCTG CTGC TGGCGCTGGCGGCG TTTGCCCGCTCGGCG TERM 238 271406 - 271434 + G 76 -6 -4.56597 | gap 1 CGGCGCTGGTGCTGG GTCTGTCG-CACT GGCT GGTGGCGGCGGAC TTTTTCCACAAGCAG Nham_4327 270217 - 271914 + | NADH/ubiquinone/plastoquinone (complex I) TERM 239 272372 - 272388 + G 70 -7.2 -3.96624 | overlap 272361 272361 TCGGCCCGGCCTGGC CGCGCC TGACC GGCGTG TTTGTGGTGGCGCTG Nham_4328 271921 - 272682 + | hypothetical protein TERM 240 273624 - 273589 - g 74 -10.3 -3.72576 | gap 1, opp_overlap 273616 CGCTGCTGCAGGAAA GCGCGCGCCATCGCCG TACGC CGGTG-CGGCGCGAGC AGCTCGACGCCTTGC Nham_4329 272661 - 275780 + | hypothetical protein TERM 241 276016 - 276028 + G 91 -9.1 -4.65895 | overlap 276007 CGATCCGCTGCTCGA CGGCT TTC AGCCG TTTTTCGATGCCCAC Nham_4330 275777 - 276103 + | nitrogen regulatory protein P-II (GlnB, GlnK) Nham_4331 277025 - 276093 - | LysR family transcriptional regulator TERM 242 276417 - 276403 - G 76 -5.6 -4.62069 | CCGTGACGCGAAAAA TGCCGC TCT GCCGCA TTGCGCGTGCCCGAG TERM 243 277675 - 277655 - g 71 -12.5 -3.05844 | TCGCTTACGTGAAGA CCTGCGGCG GCC CGCCGCACG GCATCCAGGTCGAGC TERM 244 277844 - 277865 + G 72 -2.1 -4.74012 | opp_overlap 277830 277838 ACATCAACAGCCAGC CGTTCATGC GCTG GCGCGACCG TTTTGATTTTGTGAT rbcL 277237 - 278658 + | ribulose bisophosphate carboxylase Nham_4333 278735 - 279061 + | ribulose bisphosphate carboxylase, small chain TERM 245 279496 - 279483 - g 73 -8.1 -4.07568 | GGCGGCGTTGCAAAA TGCCG GGCA CGGCA CCGCAACCCGCCCCG Nham_4334 279166 - 281841 + | carboxysome shell protein CsoS2 TERM 246 282291 - 282257 - g 70 -7.8 -4.07568 | gap 1 GTCGTGCGTCGAAAA TGCGCAGGC-CGAGC AGGCCG GCTGGCGCCAGCGCA TGCCGCTCGATGAAA Nham_4335 281853 - 283385 + | carboxysome shell polypeptide, CsoS3 Nham_4336 283399 - 283656 + | ethanolamine utilization protein EutN/carboxysome structural protein Ccml Nham_4337 283656 - 283904 + | microcompartments protein TERM 247 283952 - 283930 - f 74 -6.8 -4.36411 | overlap 283931 GAGCAAGGAGCAAAA CGGCGCGCGC GCA GCGGGCGTCA GAGTGAAGTAACTGG Nham_4338 284006 - 284305 + | carboxysome structural polypeptide TERM 248 284298 - 284312 + F 80 -2.7 -5.31275 | overlap 284290 284295 TGCCCAAGGCGCCGA GCGCC TGAGC GCCGC TTTTTTCTACTGCAA TERM 249 284540 - 284569 + G 76 -13.5 -3.14132 | GCGGTGCGTGCCGGG GCTGACGCCTGCG AGCG CGTAGGCGACGGC TTGGTGGCCGCGCAC Nham_4339 284348 - 284695 + | carboxysome structural peptide CsoS1B Nham_4341 285116 - 285382 + | hypothetical protein Nham_4342 285386 - 286021 + | cobyrinic acid a,c-diamide synthase TERM 250 286157 - 286110 - g 74 -11.8 -3.48276 | gap 1, opp_overlap 286154, overlap 286095 286140 GGCGGCGGCACACAA GACGCCGCCCTCGGCCGCCACCG CCA CCAAGGCGGCCGAGCCCG-CGCC TGCAGATTCACTGGC TERM 251 286154 - 286200 + G 74 -9.2 -3.90744 | opp_overlap 286110 286140 AGGCGGCCGAGCCCG CGCCTGCAGATTCACTGGCGGC TGA GCCGCCGTCGAGCGTGCAGGAG TTGTTTCCCGACCGC Nham_4343 286018 - 286230 + | hypothetical protein Nham_4344 286337 - 287173 + | ATPase TERM 252 289185 - 289196 + G 80 -5.8 -4.77165 | overlap 289173 ATCGGCGACCCGTTT GCCA TTCA TGGC TTTTGTTCTGACGGC Nham_4345 287217 - 289625 + | von Willebrand factor, type A TERM 253 289829 - 289814 - g 91 -3.2 -5.40072 | opp_overlap 289819 CGGCGCTGAAAAAAA CCAATG TGCG CATGGG CGAGCAAGTCGTCGA Nham_4346 289639 - 290271 + | hypothetical protein TERM 254 290866 - 290913 + G 100 -23.4 -2.90075 | overlap 290900 290901 290902 GCAGCCCGGTATTCG TGGTGCGCGACGATCCGCTGCG TCCG CGCGGCGACTCGGCGCGCACCA TCTGGTTCGCCGGGG Nham_4347 290277 - 291104 + | hypothetical protein Nham_4348 291118 - 291543 + | hypothetical protein Nham_4351 292236 - 292505 + | hypothetical protein TERM 255 293772 - 293788 + T 75 -10.8 -3.74747 | TTGGAATACTATGGT CGCCGC CGAGT GCGGCG TTTCCTGGCACTTGC Nham_4353 294475 - 293765 - | hypothetical protein Nham_4354 294825 - 294475 - | transposase IS3/IS911 TERM 256 294615 - 294630 + g 72 -11.8 -3.39449 | opp_overlap 294607 CGACCAACCGCTCGA GCGCGG CGAT CCGCGC TTCGTATTCCTGGAC SEQUENCE gi|92109490|ref|NC_007960.1| Nitrobacter hamburgensis X14 plasmid 2, complete sequence (length 188318) TERM 1 425 - 415 - g 86 -8.2 -4.56597 | opp_overlap 422, overlap 417 TGCGTGCCTCAAAAA GGCC GTC GGCC CAAGCGGGCATGTCG Nham_4355 44 - 628 + | hypothetical protein TERM 2 1104 - 1090 - f 100 -8.5 -5.07107 | opp_overlap 1050, overlap 1079 CAAAGGCGCAAAAAA GCGCC TCGCT GGCGC ATATGTGAAGTGGCT Nham_4356 1159 - 1515 + | hypothetical protein Nham_4357 1615 - 2022 + | hypothetical protein TERM 3 2327 - 2282 - g 70 -12.5 -2.8294 | gap 1, overlap 2279 CAGTTTCGACAACGA CGCTCCGGAGCCGACG-CCCAC GGC GTCGGTCGGCGGCTCCAAAGAG CGACGCATCAAATAC Nham_4358 2019 - 3437 + | secretion protein HlyD TERM 4 4359 - 4342 - g 78 -6.3 -4.66833 | overlap 4356 CCGGAACGTCAAAAA GCGATTC AAGG AAATCGC CAGCAGCCTGCCGAA TERM 5 6020 - 5992 - g 70 -11.8 -3.17051 | gap 1, opp_overlap 5992, overlap 5990 CGGTCAGTACGAATA TCTCGAGC-GCGC CACA GCGCGGCTCAAGA TTGTGGTTCCGGTAA TERM 6 6187 - 6232 + G 74 -12.6 -3.2794 | gap 2, overlap 6189 CGCCGTCGCCGTCGG CTTCATCGCGCTGG-C-CGGCG TCGC CGCCGAGACCGGCGTGGTGATG TTGATCTACCTCAAC TERM 7 6189 - 6230 + G 76 -13.8 -3.20573 | gap 2, overlap 6187 CCGTCGCCGTCGGCT TCATCGCGCTGG-C-CGGCG TCGC CGCCGAGACCGGCGTGGTGA TGTTGATCTACCTCA Nham_4359 3434 - 6616 + | heavy metal efflux pump CzcA Nham_4360 6759 - 7466 + | cytochrome c, class I Nham_4361 7589 - 8146 + | RNA polymerase sigma factor TERM 8 8601 - 8566 - g 95 -11 -4.4078 | GGCTTCCAAGGAAAA GGCGGCGCTCGCGGCT GCCA AGCCGGAAGCGGCCCC ATCCTCAGCGGCAAA TERM 9 8626 - 8644 + G 70 -11.6 -3.13403 | overlap 8624 8643 GGCAAAGCGTTCAGC GCCGGCGG AAG CCGCCGGA TCTTGCTGCCACGGC Nham_4362 8369 - 8710 + | hypothetical protein Nham_4363 9547 - 8861 - | hypothetical protein TERM 10 10635 - 10615 - g 78 -3.1 -5.00616 | CCGGTGGCCAAAAAA GCCGGCGAC GCG GTGATCGGC GCGACTATCAACAAG TERM 11 11658 - 11605 - g 91 -11.6 -4.2528 | gap 1, overlap 11634 11652 TCGCAAGGTAAGAAA GTCGGCATG-GTCGGCGACGGAGTG AATGA CGCTCCGGCTCTGACACAGGCCGAC GTCGGCTTCGCGATC Nham_4364 9583 - 12018 + | copper-translocating P-type ATPase TERM 12 12972 - 13012 + G 72 -11.7 -3.37466 | overlap 12970 GCGCCGGACTTCACG CTGACGCTCGCGGTGATCG GGG CGGTGGCGGCGAGCGCCGG TATTCTCTCTCCGAT TERM 13 13116 - 13090 - g 79 -10.8 -3.90856 | AACTTGGCAAGCAAA CGGCCGCATCAA GCC TTGGTGCTGCCG TGGGGTCCGCAGCCG TERM 14 13145 - 13172 + G 72 -2.6 -4.77438 | gap 1 CGGAGGACTCCTCTT CGATGT-TGCGCC GCT GCCGCACGCCTCG TTTTTGCTGGTAGCT Nham_4365 12054 - 13295 + | major facilitator transporter TERM 15 13542 - 13562 + T 74 -12.5 -2.87146 | opp_overlap 13558, overlap 13541 TAGGAACAAGCGTTA CGCGGGGCT AGA AGCACCGCG GTTGTTCTGGCCGCA Nham_4366 14338 - 13859 - | hypothetical protein Nham_4367 16810 - 14429 - | putative phosphoketolase Nham_4368 18123 - 17002 - | glycosidase, PH1107-related TERM 16 17969 - 17949 - G 72 -2.5 -4.67982 | TCTCATTGAACAAAA CCCGC GCTATACCGAT GCGGG AGTGGTTACCCCGCG Nham_4369 18892 - 18116 - | HAD family hydrolase TERM 17 18301 - 18319 + g 82 -3 -5.15634 | overlap 18303 TCTCGCTGATTGCGA CGCCCAGA ATG TCTCGGAG TTTTTTAATCCCGTA Nham_4370 22155 - 18889 - | Beta-phosphoglucomutase hydrolase TERM 18 22023 - 22048 + g 74 -4.7 -4.56775 | opp_overlap 22037 CTGACTGGGTGGCGT GCTGCTCGA GAAACCCG TCGAACAGC TTTTTCCAGGCCGAT Nham_4371 23238 - 22288 - | glucokinase Nham_4372 24655 - 23417 - | acetate kinase Nham_4373 25170 - 24706 - | CBS domain-containing protein Nham_4374 25600 - 25887 + | hypothetical protein Nham_4375 25981 - 26787 + | Crp/FNR family transcriptional regulator Nham_4376 26781 - 27416 + | hypothetical protein Nham_4377 27655 - 30093 + | magnesium-translocating P-type ATPase Nham_4378 31326 - 30520 - | purine phosphorylases family protein 1 TERM 19 31781 - 31771 - g 86 -8.2 -4.56597 | opp_overlap 31778, overlap 31773 TGCGTGCCTCAAAAA GGCC GTC GGCC CAAGCGGGCATGTCG Nham_4379 31364 - 31984 + | hypothetical protein Nham_4380 34503 - 32047 - | copper-translocating P-type ATPase TERM 20 32984 - 33002 + g 84 -3.9 -5.10497 | gap 1 AGGGTGCCCGTCTTG TCGACCAC GAGC GTG-TCGA TTTTTTCCATGCGTT Nham_4381 34557 - 34832 + | hypothetical protein Nham_4382 34919 - 35395 + | hypothetical protein Nham_4383 35416 - 35775 + | hypothetical protein TERM 21 37172 - 37157 - g 75 -11.8 -3.57263 | AGTCCGACCTGCAAA CCGCCG TCAA CGGCGG CGGCAGCGGAGAAGG Nham_4384 35785 - 37242 + | outer membrane efflux protein Nham_4385 37254 - 38633 + | twin-arginine translocation pathway signal TERM 22 38625 - 38638 + F 70 -2.3 -4.73828 | opp_overlap 38625 ATGAAGGGAATGAAG GGCAT GTAG ACGCC TTCTTTTTTGATTGT TERM 23 39021 - 39006 - f 72 -6.1 -4.33182 | overlap 39003 GGAGTCACAAAACAA GCTGC TCTTTT GCAGC CGGTCTCATCAAATG TERM 24 39474 - 39506 + G 74 -9.1 -3.86822 | opp_overlap 39479 GCGTGGGGACTCGGA CACAACGATGCTACA CTC TGGAGCATCGTCGCG TTTGTCGGGAAATTA Nham_4387 39069 - 39689 + | cytochrome c family protein Nham_4389 40454 - 40774 + | hypothetical protein Nham_4393 43149 - 42574 - | hypothetical protein TERM 25 42974 - 42993 + g 76 -10.6 -3.84825 | GCTTCAGCGTTGCTG GCGGCCAG ACAC CAGGCCGC TTTCATGTCCCTGGC Nham_4394 43286 - 43636 + | IstB Nham_4395 45509 - 43656 - | resolvase-like protein TERM 26 44200 - 44210 + g 76 -6.8 -4.48299 | overlap 44167 44164 TCGTCGATCACCGTC CGCA CGA TGCG TTTCTTTGCCTCTGG Nham_4396 46390 - 45704 - | LuxR family transcriptional regulator Nham_4397 48077 - 47118 - | copper resistance D TERM 27 47710 - 47664 - G 70 -12.2 -3.14344 | gap 1 CAGCGCTGCGATCAA GCCGAATGCCGAGGTCAGCGC AGGCCA GCGC-GTCCACGGCATCCGGG AGCAGGCCAAACAAG Nham_4398 48448 - 48092 - | copper resistance protein CopC Nham_4399 49455 - 48451 - | hypothetical protein TERM 28 49370 - 49360 - G 77 -2.4 -5.00616 | CGTTGCTGGAAAAAA GCGG TTG CCGA CGATTTCATGGGCAA Nham_4400 49976 - 49533 - | hypothetical protein Nham_4403 51111 - 50713 - | hypothetical protein TERM 29 51199 - 51221 + r 78 -9.9 -3.9644 | gap 1 TCGTCTTCGCGCCCA TTGC-CGCCG TTTC CGGCGCGCAA TTCTTATGTTGCCGC Nham_4404 54440 - 51243 - | heavy metal efflux pump CzcA Nham_4405 56089 - 54437 - | secretion protein HlyD TERM 30 56044 - 56028 - G 76 -7.9 -4.2558 | opp_overlap 56037, overlap 56029 GACGCCCGACGAAAA TCGCCTC GGG GAGGCGG TCGCGAGCCGTCGCC TERM 31 56334 - 56345 + r 80 -2.2 -5.30616 | gap 1, overlap 56316 ACGGCGGCTGTTTCA G-CCG TGA CGGTC TTTTTGTTTCGGTGC Nham_4406 56600 - 56331 - | hypothetical protein TERM 32 56800 - 56781 - R 72 -6.4 -4.34402 | CGGTCGACAGGAAAA GTCCATCG GCGT CGACGAAC CCGAGGTCAGGTATC Nham_4407 57607 - 56966 - | hypothetical protein TERM 33 57510 - 57484 - G 75 -2.9 -4.91109 | gap 1, overlap 57485 CGCCGAGGACAAAAA CCACCGCCAGCA GGGA TGCCG-CGGCGC CAACCAAGATTGCAA Nham_4408 58158 - 57604 - | RNA polymerase sigma factor TERM 34 58025 - 58042 + g 75 -3.3 -4.92783 | overlap 58012 58028 TCCTCGGCCGTGCGT CCGGCTC GTGC GAGCTTG TTTTTGTAATAGCTT TERM 35 58028 - 58039 + g 76 -5.8 -4.56153 | overlap 58012 58025 TCGGCCGTGCGTCCG GCTC GTGC GAGC TTGTTTTTGTAATAG Nham_4409 58439 - 58681 + | hypothetical protein TERM 36 59116 - 59101 - T 78 -9 -4.10552 | GGGTATCAAACCAAA GCGATG GGAT CATCGC ACTCGGGTCTTAATG Nham_4410 60467 - 59184 - | hypothetical protein Nham_4411 60916 - 60539 - | hypothetical protein TERM 37 60791 - 60758 - G 83 -9.5 -4.27316 | gap 1, overlap 60743 60742 GTCGGCAATCGAAAA GATTG-CGACGACGCC AAT GGCGGCGCCGGCCATC CATGATGTGTGCCAT Nham_4412 61429 - 61175 - | hypothetical protein Nham_4413 61457 - 62107 + | hypothetical protein Nham_4414 62216 - 62539 + | hypothetical protein Nham_4415 64145 - 62766 - | hypothetical protein TERM 38 63599 - 63581 - G 91 -9.6 -4.44245 | overlap 63572 ACATGAGCCATAAAA TTGGCAAG ATA CCTGCCAA AAGGACAATGTAGAG Nham_4416 64816 - 64478 - | hypothetical protein TERM 39 64536 - 64524 - G 91 -9.1 -4.4078 | CCCGGGTAATGAAAA GCCGT TCG ACGGC AGCAAGGAGGATGGG Nham_4417 65137 - 64853 - | mercuric transport protein periplasmic protein Nham_4418 65526 - 65149 - | mercuric ion transport protein, MerT TERM 40 65442 - 65412 - G 81 -7.4 -4.42748 | overlap 65409 CCAGGGTAAAAAGAA GCAGCGGCAACATG CAG CACGACGACGCCGC GACAGCGCCCAGGAC Nham_4419 66237 - 65539 - | cytochrome c biogenesis protein, transmembrane region Nham_4420 66494 - 66234 - | thioredoxin/glutaredoxin Nham_4421 66917 - 66498 - | MerR family transcriptional regulator Nham_4422 68267 - 67035 - | major facilitator transporter Nham_4423 70740 - 68287 - | heavy metal translocating P-type ATPase TERM 41 70359 - 70333 - G 79 -10.8 -3.86015 | overlap 70334 CATGGCCGGTAGAAA TCCGATCCAGCC CAC AGCCGGATCGGC AATGATGGGAATCGC TERM 42 70358 - 70334 - G 77 -14.3 -2.91395 | overlap 70333 ATGGCCGGTAGAAAT CCGATCCAGCC CAC AGCCGGATCGG CAATGATGGGAATCG TERM 43 70823 - 70835 + r 78 -6.2 -4.69664 | ATCCGCGTGCTACGA CCCG AAAGC CGGG TTTTTGAATCGTATC Nham_4424 71021 - 70806 - | heavy metal transport/detoxification protein Nham_4425 71737 - 71270 - | ArsR family transcriptional regulator TERM 44 71845 - 71824 - H 81 -11.7 -3.78775 | opp_overlap 71819 71816 71826 GTTTCCATTATTAAA TATGTCGAG ACGT CTCGACATA TCGTAATCATATTTC Nham_4426 71968 - 72489 + | twin-arginine translocation pathway signal TERM 45 73306 - 73293 - g 84 -3.7 -5.18726 | overlap 73294 73295 CGTCGACAAGAAAAA GGCCG AGTT CGGCG CGGAGCCAGTCGATC TERM 46 73982 - 73963 - g 70 -10 -3.5944 | overlap 73965 ACCGACATGGTGAAA GACGCCAT GATG ACGGCGTC ATACGGCGACCGTGC Nham_4427 72502 - 74964 + | arsenate reductase (azurin) TERM 47 74983 - 75008 + T 100 -16.9 -5.42259 | ATCCTCCCGCATCCT TGCCTGAGCGG AACG CCGCTCGGGCA TTTTTTTGAAGCTCA Nham_4428 75882 - 75160 - | NADPH-dependent FMN reductase Nham_4429 76276 - 75872 - | arsenate reductase Nham_4430 76971 - 76273 - | major intrinsic protein Nham_4431 77846 - 76971 - | ArsR family transcriptional regulator TERM 48 77808 - 77786 - G 84 -11.2 -4.12188 | CCAGCAGGCGGAAAA CGTCCAGACG GGT CGCCTGGGCG AGGGCGGAAAGTGCC Nham_4432 77954 - 78271 + | ArsR family transcriptional regulator Nham_4433 78321 - 79691 + | putative secreted protein TERM 49 80420 - 80431 + G 76 -5.8 -4.57569 | CGTTCGGTGCAACGC CAGC GCAG GCTG TTTTTGCGGGGATGA Nham_4434 79702 - 80883 + | major facilitator transporter Nham_4435 81820 - 81125 - | LuxR family transcriptional regulator Nham_4436 84531 - 82387 - | TRAG protein TERM 50 82754 - 82767 + g 100 -3.7 -5.40004 | overlap 82753 TCCATTGGGGCTGGG CCGGC ATCC GCCAG TTTTTTCGTTTGGTC Nham_4437 85558 - 84509 - | type II secretion system protein E TERM 51 84890 - 84932 + gr 86 -6.4 -4.87665 | gap 3, overlap 84889 84890 84892 TTCGACCGTGACACG C-GCCTCGCC-CTGGTCTCCT TTGG AGGCGACCAGCGGC-AGGTAG TTTTTCTGAATCGGA TERM 52 84892 - 84929 + gr 73 -11.4 -3.32986 | overlap 84889 84890 84890 CGACCGTGACACGCG CCTCGCC-CTGGTCTCCT TTGG AGGCGACCAGCGGC-AGG TAGTTTTTCTGAATC TERM 53 85140 - 85174 + gr 79 -7.1 -4.56597 | gap 1 CACAGCCGACGGTCG GTTTCGG-AGAGGGCG CCCT CGCCCGCTGTCGACAC TTTTTCGAAGGAGCC Nham_4438 86867 - 85530 - | conjugation TrbI-like protein TERM 54 86379 - 86397 + gr 89 -16 -3.30124 | GTCCTCGGGATTTCG TGCGGCGG CCG CCGCCGCA TTGTCGGCGATCACC Nham_4439 87677 - 86874 - | conjugal transfer protein TrbG/VirB9/CagX Nham_4440 88390 - 87674 - | VirB8 Nham_4441 89517 - 88387 - | TrbL/VirB6 plasmid conjugal transfer protein TERM 55 89544 - 89576 + r 83 -14.1 -3.05596 | overlap 89537 GATCGGCCGCATCGG CCCGCAGCGGTCGAG GCT CTTGAACGCTTCGGG TTGCGTGGGCGCCTG Nham_4442 89923 - 89714 - | hypothetical protein Nham_4443 90639 - 89920 - | conjugal transfer protein TERM 56 89995 - 90007 + g 70 -10.5 -3.61398 | GTTGGCCTGATTGGC CGCGG CTG CCGCG TTGTTGACGACGCCA TERM 57 90172 - 90208 + g 84 -15.1 -3.35934 | overlap 90175 CTGCGTCGAGTTGAT GAGCCCCGACAGCGTCG CCG CGACGTTGACGGAGTTC TTGTAGGCTGTGTCC TERM 58 90175 - 90205 + g 81 -13.2 -3.81447 | overlap 90172 CGTCGAGTTGATGAG CCCCGACAGCGTCG CCG CGACGTTGACGGAG TTCTTGTAGGCTGTG Nham_4444 91543 - 90650 - | hypothetical protein Nham_4445 93951 - 91540 - | type IV secretion/conjugal transfer ATPase Nham_4446 94258 - 93962 - | type IV secretory pathway, VirB3-like Nham_4447 94560 - 94255 - | conjugal transfer protein, trbC Nham_4448 95327 - 94575 - | lytic transglycosylase, catalytic TERM 59 95866 - 95846 - g 81 -16.1 -2.75712 | overlap 95843 CGAGCTATCCAACCA CGCCGCGCG AAG CGCGCAGCG ACCCCTATTTCGTCG Nham_4449 95428 - 95937 + | hypothetical protein Nham_4450 95939 - 96538 + | succinoglycan biosynthesis protein exoI-like Nham_4451 96567 - 96905 + | single-strand binding protein/primosomal replication protein n Nham_4452 96892 - 97476 + | hypothetical protein Nham_4453 97473 - 98021 + | hypothetical protein Nham_4454 98031 - 98696 + | hypothetical protein Nham_4455 98723 - 99205 + | hypothetical protein Nham_4456 99202 - 99894 + | hypothetical protein Nham_4457 101024 - 102037 + | hypothetical protein Nham_4458 102034 - 102522 + | putative threonine efflux protein Nham_4459 102515 - 104383 + | hypothetical protein Nham_4460 104409 - 105296 + | hypothetical protein Nham_4461 105421 - 106866 + | hypothetical protein TERM 60 107257 - 107229 - f 83 -14.6 -3.15544 | opp_overlap 107224 CGCTAGGCGCAGGAA GCGGCCATCCAG TATCG CCGGATGACCGC ACCCGATTTCAGATT TERM 61 107538 - 107518 - f 86 -9 -4.62475 | gap 1, overlap 107519 107520 ATGGAGAAATGAAAA CGCCCGAGC TACA GCTCGGG-G CCGTAAGCTACCTAT TERM 62 107537 - 107520 - f 71 -12.7 -2.61117 | overlap 107518 107519 GGAGAAATGAAAACG CCCGAGC TACA GCTCGGG GCCGTAAGCTACCTA Nham_4463 107776 - 108690 + | hypothetical protein TERM 63 111509 - 111521 + G 76 -5.5 -4.62069 | overlap 111510 GTGTTGTCATTTTTA TCGGA AAT TCCGG TTTTTGCGATAGAAA Nham_4464 108692 - 112255 + | DEAD/DEAH box helicase-like Nham_4465 112813 - 112568 - | hypothetical protein Nham_4466 113469 - 112846 - | autoinducer synthase TERM 64 113450 - 113411 - G 79 -11.5 -3.84451 | opp_overlap 113426, overlap 113405 TGGCGGAAACGGAAA GCCCGGTCCATCAG-CGCC GCAT GGCGACTGATGT-CCGAGC CGGGGATGACCATCA Nham_4468 114313 - 113996 - | hypothetical protein Nham_4469 114574 - 114750 + | hypothetical protein Nham_4470 114957 - 115883 + | hypothetical protein TERM 65 116158 - 116141 - g 73 -6.3 -4.30576 | gap 1 CTGGGACGATGAAAA GCGGGACT ATG AGTCC-GC AGGCGAAGTCTATGT Nham_4471 116016 - 116429 + | hypothetical protein Nham_4472 116426 - 116689 + | hypothetical protein TERM 66 117031 - 117005 - g 71 -10.8 -3.53012 | overlap 117006 GGCCGCGGCTCGAAA TGGGGCAATCCG TTC CGGATTGGCCCT GATGGCGACCGGGCG TERM 67 117030 - 117006 - g 75 -14.3 -2.71712 | overlap 117005 GCCGCGGCTCGAAAT GGGGCAATCCG TTC CGGATTGGCCC TGATGGCGACCGGGC Nham_4473 116867 - 117355 + | hypothetical protein TERM 68 117926 - 117957 + G 71 -8.7 -3.85698 | gap 1 CAGTGAACGCTGGGC GGTGCATC-TGCGC GGCAA GCGCACGGTGCTCC TTTATGGCGGCCCGC Nham_4474 117468 - 118073 + | hypothetical protein TERM 69 118200 - 118180 - g 100 -16.9 -3.73775 | CGCATCGCCAGGAAA CATCGCCGC GGC GCGGCGATG AGAGAAGCGCGCAAG Nham_4475 118090 - 118284 + | hypothetical protein TERM 70 119394 - 119422 + G 72 -3.8 -4.56597 | gap 1, overlap 119400 GCTTCCGCGCCGACG CAGG-CACCGACG TCGT CGTCGATATCCTG TTTTTCCGAAAGCGC TERM 71 120972 - 120984 + G 100 -10.5 -5.24799 | ATCTCCAGCTTCCGG GCGCC TCT GGCGC TTTTTCTCTTTATGG TERM 72 122286 - 122276 - g 71 -8.2 -3.86015 | overlap 122277 CAGCCCTTCGAGAAA CCCG GCG CGGG CCAACTCATCTTTTC Nham_4476 118388 - 123499 + | helicase-like Nham_4477 123748 - 125430 + | ParB-like nuclease TERM 73 125453 - 125489 + F 75 -9.2 -3.91897 | opp_overlap 125455, overlap 125458 CTTGCCTTTTCCAAC GATCCCCGCCGCCGGC CCCCA GCCGGCGGCGGTTCTG TTTCTCCATCACCGA TERM 74 125487 - 125455 - f 73 -12.5 -2.70932 | opp_overlap 125453 125458 TGCCTTTTCCAACGA TCCCCGCCGCCGGCC CCC AGCCGGCGGCGGTTC TGTTTCTCCATCACC TERM 75 125458 - 125484 + F 100 -22.3 -3.90766 | opp_overlap 125455, overlap 125453 CTTTTCCAACGATCC CCGCCGCCGGC CCCCA GCCGGCGGCGG TTCTGTTTCTCCATC TERM 76 125592 - 125544 - g 73 -12.6 -3.22298 | gap 4 TCGATCTATGACCAA GC-GCCGATCGGCGCGCTCATCCG CTATT CGGATG-GCACGCCG--CGGCCGC CGCAGCGATTCAAGA TERM 77 125658 - 125639 - g 73 -8.6 -4.0156 | gap 1 GGAGAGCAACAACAA TGTCGGACG TCT CGTCCG-CA AAGCCGAGTCCCACA TERM 78 125753 - 125765 + G 72 -7.7 -4.21275 | CGTCGTGGTGCTCAA GGTCT TCA AGACC TTTTCCGTGGGTTCG Nham_4478 125517 - 125990 + | hypothetical protein TERM 79 126027 - 126044 + G 100 -14.1 -4.86731 | opp_overlap 126022 AGGCCAACCATCCCA CCCCCGC CGCG GCGGGGG TTTTGTTTACCCGAA TERM 80 126374 - 126391 + G 71 -8.3 -3.84825 | opp_overlap 126375, overlap 126375 GTCGTCTCTCACTCA ACCGCCG GACA CGGCGGC TTTCATCTCGATGCC TERM 81 126469 - 126493 + G 70 -9.9 -3.59247 | opp_overlap 126466 126463 GTACGAAGAGGATTG CGCGTGGGCGA CTG TCGCGCAAGCG TTTCCGGAATTGTTC Nham_4479 125987 - 126859 + | hypothetical protein Nham_4480 126856 - 127314 + | hypothetical protein Nham_4481 127311 - 127718 + | hypothetical protein Nham_4482 128030 - 128617 + | hypothetical protein TERM 82 128625 - 128644 + F 100 -16.4 -4.11216 | TCGAGTAGCCGTCAC GGCGGGGC TTCA GCCCCGCC TTTTCGACGTCGCAA TERM 83 128666 - 128687 + F 100 -17.3 -5.28176 | ACGTCGCAACTTCGT GGGCCGGTC GTAA GACCGGCCC TTTTTTGTCGCTGGC Nham_4483 128906 - 129832 + | ArdC gene in pSa(IncW plasmid)-like TERM 84 129894 - 129919 + F 70 -11.7 -2.8082 | opp_overlap 129896, overlap 129893 TTTCTCGAGATCAAT AAGGCCCCGCC GTGC GGCGGGGCCGC CTTATTGCGTGCATC TERM 85 129917 - 129896 - f 100 -18.7 -3.7732 | opp_overlap 129894 129893 TCTCGAGATCAATAA GGCCCCGCC GTGC GGCGGGGCC GCCTTATTGCGTGCA Nham_4484 130464 - 130814 + | hypothetical protein TERM 86 130854 - 130822 - f 73 -11.8 -3.09878 | opp_overlap 130826 GCGACTGAGCGAACA GTCCGGCCCCGCCG TCGAT CGGCGGGGCCTTTC CATGGAGGCAGTCCC TERM 87 130826 - 130850 + F 100 -20 -3.64703 | opp_overlap 130822 CTGAGCGAACAGTCC GGCCCCGCCG TCGAT CGGCGGGGCC TTTCCATGGAGGCAG TERM 88 131074 - 131055 - g 70 -10 -3.66178 | gap 1 CGTCGCAATCGCAAA CGCGATCGG CGG CCGA-CGCG CTGCTGCAATCCATC Nham_4485 130997 - 132019 + | luciferase-like TERM 89 131998 - 132026 + T 86 -14.6 -3.31322 | gap 1 ACTGGCCCATGTCGC GCCGGCGCTCGGC TGGC GCTGA-CGCCGGC TTATCCGCGCTTCAG Nham_4486 132316 - 132038 - | hypothetical protein Nham_4487 132674 - 132456 - | hypothetical protein TERM 90 132902 - 132877 - H 95 -15.4 -3.727 | opp_overlap 132877 GCGATCACAGTGAAA GCCCCGCCCA TCGATT CGGGCGGGGC TTTTCCATGGAGGCA TERM 91 132877 - 132902 + H 100 -14.7 -4.18018 | opp_overlap 132877 GCGATCACAGTGAAA GCCCCGCCC ATCGATTC GGGCGGGGC TTTTCCATGGAGGCA Nham_4488 133163 - 134437 + | hypothetical protein Nham_4489 135442 - 134519 - | hypothetical protein TERM 92 135402 - 135349 - G 74 -13.2 -3.26471 | gap 2 CGACTGCGAGATCAA TCGGCGGCTCGGGGTTGCCAAGGCCC CGCA GGACCTTGGCAA-CCTGTGC-GTCGA TGTCAGCAACAGTAC Nham_4490 135939 - 135439 - | hypothetical protein TERM 93 135906 - 135849 - G 71 -14 -2.5294 | gap 1, opp_overlap 135895 135896, overlap 135846 135848 135851 GATCGTCCAGAACAG GATCGCGCGCAGCAAGACCGGCGCCGA TCACG TCGGCGCCT-TCAAGCCGGGCGCGGTC AAGCCACCATTGCTT TERM 94 135985 - 135963 - R 75 -9.9 -3.85698 | gap 1, opp_overlap 135966 CTCCTCGCCGAGAAA TGACCGCGCG CGTT CG-GCGGTCA TCTCGAAATATCTCA Nham_4491 136565 - 135945 - | hypothetical protein Nham_4492 136774 - 136562 - | CopG-like DNA-binding TERM 95 136798 - 136816 + H 70 -2.4 -4.84359 | CCGTCATTGTGACAA CATATAGA GAA TCAGTATG TTTTTGTCAACGTAA TERM 96 136844 - 136862 + H 72 -4.6 -4.69664 | opp_overlap 136834 136856 136858, overlap 136836 136834 136845 136855 136858 TAAAATAGCTAGTGC GTAGCTAT TGA ATAGCTAA TTTTTAGCTACTATA Nham_4493 136934 - 137899 + | DNA polymerase, beta-like region Nham_4494 137909 - 138424 + | hypothetical protein TERM 97 139039 - 139088 + G 75 -12.1 -3.55444 | gap 1, opp_overlap 139035 ATGTGCACGAACCGC CTGAGCGCACTCGACCCCGCGGTG CGG CGGCGCGCGGCCGA-TGTGCTTAG TTTCGCCCGTCCCGG Nham_4495 138424 - 139371 + | AAA ATPase, central region TERM 98 140152 - 140162 + G 71 -8.2 -3.89524 | opp_overlap 140151, overlap 140151 CGGCCCAGCACAGAG CGCG CGG CGCG TTTATGGCATAAAAT Nham_4496 139382 - 140920 + | hypothetical protein Nham_4498 141250 - 141699 + | hypothetical protein TERM 99 142298 - 142310 + G 86 -4.8 -5.17353 | CCTATGCCGACTTCC CCGA TCATT TCGG TTTTTTCCTGCCTCT TERM 100 144113 - 144100 - g 82 -3.1 -5.2166 | gap 1, opp_overlap 144101 GAACAAGTGAAAAAA GA-GCG AAC CGCATC TACTGCAAAGACGAC TERM 101 144454 - 144441 - g 82 -5.9 -4.8236 | CACGGAAAAAAACAA GGCCG ACCT CAGCC GCTGCGCCGAGAACA Nham_4499 141946 - 144711 + | putative DNA methylase Nham_4500 144708 - 146786 + | DEAD/DEAH box helicase-like Nham_4501 146776 - 148005 + | hypothetical protein Nham_4502 148292 - 150496 + | ATPase Nham_4503 150509 - 151594 + | 5-methylcytosine-specific restriction enzyme subunit McrC TERM 102 151653 - 151665 + F 74 -6.9 -4.34402 | CGGAATCCAGCGTGT CCGGC ATA GTCGG TTTTAGTATGCACCG Nham_4504 151764 - 152447 + | hypothetical protein TERM 103 152472 - 152485 + T 70 -2.3 -4.77036 | CACCACCGTTGAAGC GCGGG GTAA TTCGC TTTTTGCTACTCGCA Nham_4505 153923 - 152709 - | hypothetical protein Nham_4506 153924 - 155606 + | integrase catalytic subunit Nham_4507 155610 - 156500 + | TniB Nham_4508 156497 - 157417 + | hypothetical protein Nham_4509 158088 - 157378 - | putative transcriptional regulator TERM 104 157636 - 157600 - G 91 -9.5 -4.39166 | gap 4, opp_overlap 157631, overlap 157601 157602 GGTGACATAGGAAAA CGGCGCGCCGGGCTCG-GC CAT GCGCG-GCCCGGCG--CCG ATCAGATCGAGGCGT TERM 105 157950 - 157931 - G 71 -12.8 -3.09516 | TCGTCGAGCACGCAA GCCCGCCC GATG AGGCGGGC CAGCGTCTCGCGCGG Nham_4510 159056 - 158151 - | hypothetical protein TERM 106 158267 - 158229 - G 73 -8.1 -4.08064 | overlap 158216 158230 AAGCGTTTCGCAAAA GCGCCGCGCCG-CCCGG TCGGATC CCAGGCCGGCCCGGC-C GACCATCCGCCAGGG TERM 107 158937 - 158880 - G 72 -11.7 -3.35679 | gap 1, overlap 158883 CTGGTCGAGCGACAA CAGCGC-CGCGCCGGCCGCGAAGGCCGC GTC GCGGGCGCCACCGCCGGCGCTTGGACCG GCGCCATACCCCACC TERM 108 159239 - 159294 + G 95 -13.3 -4.25104 | gap 3, opp_overlap 159226 159224 159223 159247, overlap 159243 CAGCCCTCCAGCCCA CCGGAAGACCGTGCGGCG-CGCGCGCCG GCG CGGCGTGCGACGCCGCA-GCTGT-CGGG TTTTGATGGCAGCGG TERM 109 159243 - 159293 + G 86 -16.1 -3.14848 | gap 2, opp_overlap 159226 159224 159223 159247, overlap 159239 CCTCCAGCCCACCGG AAGACCG-TGCGGCG-CGCGCGCCG GCG CGGCGTGCGACGCCGCAGCTGTCGG GTTTTGATGGCAGCG TERM 110 159289 - 159247 - g 90 -17.7 -3.06162 | gap 2, opp_overlap 159243 159239, overlap 159224 159223 CAGCCCACCGGAAGA CCG-TGCGGCG-CGCGCGCCG GCG CGGCGTGCGACGCCGCAGCTG TCGGGTTTTGATGGC TERM 111 159565 - 159551 - g 71 -12.8 -3.09516 | overlap 159529 159530 GTTTCGACGATCGAA CGCCGC CTG GCGGCG GTCACCACGACCTAT Nham_4511 159191 - 160300 + | phage integrase Nham_4512 161185 - 160739 - | hypothetical protein Nham_4513 161447 - 161172 - | prevent-host-death protein Nham_4514 161562 - 161837 + | prevent-host-death protein TERM 112 163042 - 163022 - g 100 -9 -4.82901 | gap 1 TCGGCCGGACAAAAA CCGCCGTCG CGGA CGA-GGCGG GCAGGGTGCTTCTGG Nham_4516 162229 - 163497 + | phage integrase TERM 113 164764 - 164737 - g 70 -10.6 -3.60627 | gap 1 CCACCCGATGGTAAA GAGCACCGCCATC GCA GATGCCGG-GCTC ACAAAGCAGACCCTG Nham_4517 163691 - 164896 + | cobyrinic acid a,c-diamide synthase TERM 114 165353 - 165334 - g 71 -9.2 -3.72893 | GATCTCGGCATCAAA GTGCGCGC GGTG GTGCGCAC GCTCACTGATGAGCA Nham_4518 164899 - 165918 + | parB-like partition proteins TERM 115 165914 - 165898 - f 72 -9.3 -3.79043 | TACGACGAATTCAAA GCGGGCG ATC CGCCAGC ATAACCCAGCTTGCC TERM 116 166025 - 165996 - f 100 -12.1 -5.11836 | ATAGGCAAAAGAAAA GGCCCCCGAAACG TCAC CGTCCCGGAAGCC CCTCTGTTGTGTTTG Nham_4519 166144 - 167376 + | replication protein C Nham_4520 167995 - 168327 + | single-strand binding protein/primosomal replication protein n TERM 117 168334 - 168357 + T 74 -13.8 -2.53715 | opp_overlap 168332 168334, overlap 168333 GCGGCATAGCGAACA GCGGGGAGGC TTCG GCCTCCCCAC CTTGCTCCTCGTCGA TERM 118 168357 - 168334 - T 88 -16 -3.12327 | opp_overlap 168334 168333, overlap 168332 GCGGCATAGCGAACA GCGGGGAGGC TTCG GCCTCCCCAC CTTGCTCCTCGTCGA TERM 119 168437 - 168470 + T 100 -13.8 -5.07486 | AGGAAGTTTTCGCGA TCGGGTCTGCCGCG CGAGCC CGCGGTCGGCCCGA TTTTTCTTGCCGATC Nham_4521 168787 - 168416 - | putative transcriptional regulator Nham_4522 169208 - 168897 - | transcriptional regulator TERM 120 169176 - 169193 + g 74 -4.7 -4.65263 | overlap 169177 GCCTTGCGCTGTGTG AGCTGCC TTTC GGCGGCA TTTCTTTTCGCCCAT TERM 121 169367 - 169341 - H 100 -15.2 -3.85698 | opp_overlap 169347, overlap 169347 GTGTGTTCGGACAAA GAAAAACCCGGC AGA GCCGGGTCTCTC GAGAGGATGAACGAG TERM 122 169347 - 169361 + H 74 -12.8 -2.87344 | opp_overlap 169341 169347 TCGGACAAAGAAAAA CCCGGC AGA GCCGGG TCTCTCGAGAGGATG TERM 123 169361 - 169347 - H 100 -12.8 -5.38054 | opp_overlap 169347, overlap 169341 TCGGACAAAGAAAAA CCCGGC AGA GCCGGG TCTCTCGAGAGGATG Nham_4523 169374 - 170999 + | replication protein C Nham_4524 171462 - 171049 - | hypothetical protein Nham_4525 172214 - 171459 - | cobyrinic acid a,c-diamide synthase TERM 124 172598 - 172580 - H 90 -11.7 -4.24002 | GGCCAAACCGGAAAA CGGCTGC TGGGC GCAGCCG GGAGGCGCTGACGCG TERM 125 172617 - 172644 + H 85 -15.6 -3.06162 | gap 1 GGCGCTGACGCGCGA CGCC-GGCGTCCT GAG GGGACGCCCGGCG TATTCGGCTCCGGTC Nham_4526 172699 - 173127 + | hypothetical protein TERM 126 174544 - 174599 + G 71 -12.6 -3.06501 | gap 3, opp_overlap 174527 174528 CGATCGTCGAAGCGG CGGATCGGCCGCGT-GCCGCG--CGCG AAGCC CGCGATCGCGCCTACGCCGCCGATCCC TTCAATCAACGTCTC Nham_4527 173229 - 175466 + | hypothetical protein Nham_4529 176212 - 176583 + | hypothetical protein Nham_4530 176638 - 177915 + | outer membrane efflux protein TERM 127 178392 - 178408 + G 75 -3.7 -4.72846 | overlap 178405 TTGGTCGCGGATCTG TCGAC GGTGTGG GTCGA TTTTTCGGTCTATCG TERM 128 178827 - 178808 - g 76 -5.8 -4.57569 | gap 1, overlap 178811 CTATGCGGCCAAAAA CAG-CTTCA TCG TGAAGGCTG AGATGACGAAAGGAG Nham_4531 177912 - 178862 + | secretion protein HlyD TERM 129 178938 - 178952 + G 71 -5.6 -4.27316 | CGCCCTTCATGATCT CACGGA TTT TCCGGG TTTTACCTTCGACGA Nham_4532 178852 - 179217 + | nitrogen regulatory protein P-II (GlnB, GlnK) TERM 130 179602 - 179626 + G 76 -10.7 -3.68324 | overlap 179600 GACCGCGATGGGGCC GATCTCGACGG GAC TCGGCGAGATC TATTTATTCACGGTC Nham_4533 179210 - 182419 + | heavy metal efflux pump CzcA Nham_4535 182973 - 185177 + | heavy metal translocating P-type ATPase Nham_4536 185354 - 185638 + | type IV pilus assembly PilZ TERM 131 185905 - 185895 - gf 76 -8.2 -4.15044 | opp_overlap 185878 GCTTGCGGCAACAAA GCGG CCG CCGC GCATTACTTTTCCGT TERM 132 186119 - 186087 - gf 77 -11.9 -3.61178 | overlap 186091 GCCAGCGATTTGAAA CTCATCAACGCCGGC GCT GCCGGCATCGAGGTG ACTGACGGCACCTCG TERM 133 186115 - 186091 - gf 78 -14.3 -2.65354 | overlap 186087 GCGATTTGAAACTCA TCAACGCCGGC GCT GCCGGCATCGA GGTGACTGACGGCAC Nham_4537 185607 - 186200 + | hypothetical protein Nham_4538 186204 - 186719 + | hypothetical protein Nham_4539 188288 - 187482 - | purine phosphorylases family protein 1 SEQUENCE gi|92109663|ref|NC_007961.1| Nitrobacter hamburgensis X14 plasmid 3, complete sequence (length 121408) TERM 1 942 - 910 - g 74 -5.4 -4.63218 | opp_overlap 913, overlap 878 912 GGTCTTCGAAGAAAA CCGCGCCGAGAACG CCCGC CGTATTCAGCGCCG ACCCGAAATCGTGCT TERM 2 2436 - 2415 - g 86 -13.7 -3.90112 | opp_overlap 2410 GCCGCGCGAAGGAAA CCACGCTCG ACTA CGAGCGCGG CGCCCTTTATCGCGA TERM 3 3204 - 3235 + G 70 -11.6 -3.14931 | gap 1, opp_overlap 3205 3206 TCGACGGCTTCAACA AG-GCGATCGCCGAG CGC TTCGGCGATCGCACC TTCCTGCCGAATGCG TERM 4 3233 - 3205 - g 85 -14.6 -3.62046 | opp_overlap 3204, overlap 3206 CGACGGCTTCAACAA GGCGATCGCCGA GCGCT TCGGCGATCGCA CCTTCCTGCCGAATG TERM 5 3232 - 3206 - g 86 -18.1 -2.77013 | opp_overlap 3204, overlap 3205 GACGGCTTCAACAAG GCGATCGCCGA GCGCT TCGGCGATCGC ACCTTCCTGCCGAAT TERM 6 3313 - 3284 - g 74 -14.3 -2.57344 | gap 1, overlap 3283 CAGGCCTTCGAGAAG GCGGC-CGCCGG CATGGAC CCGGCGCGCCGC GAGCAGCTGAAGGAA Nham_4540 122 - 3445 + | conujugal transfer protein TraA TERM 7 3834 - 3865 + G 90 -8.6 -4.85599 | CAGGCCACTCTTGCC GTTCGCGGGCGG CGTCATTC CCGCCGGCGCAC TTTTTCTCCACTCCG Nham_4541 3442 - 3975 + | conujugal transfer protein TraF precursor Nham_4542 3995 - 5131 + | hypothetical protein Nham_4543 5143 - 5766 + | hypothetical protein TERM 8 7248 - 7227 - f 77 -8 -4.2558 | gap 1 CATGTTGGATTAAAA GCGG-GCCA TGCTG TGGCGCCGC GGCGTCATCCGCGCA Nham_4546 7284 - 8003 + | hypothetical protein Nham_4548 8473 - 8919 + | hypothetical protein Nham_4549 9324 - 8944 - | hypothetical protein Nham_4550 9933 - 9433 - | heat shock protein Hsp20 TERM 9 9957 - 9988 + r 75 -9.4 -3.92542 | gap 1, opp_overlap 9956 9960, overlap 9958 9961 TCTCCTCGATTCAAG C-GACTTCCGCCGCG AAC CGCTGCGGAAATCTG TTCTTTGCCGATGCG TERM 10 9958 - 9986 + r 81 -13.1 -3.55202 | opp_overlap 9956 9960, overlap 9957 9961 CTCCTCGATTCAAGC GACTTCCGCCGCG AAC CGCTGCGGAAATC TGTTCTTTGCCGATG TERM 11 9961 - 9983 + r 74 -13.4 -2.60309 | opp_overlap 9960 9956, overlap 9958 9957 CTCGATTCAAGCGAC TTCCGCCGCG AAC CGCTGCGGAA ATCTGTTCTTTGCCG Nham_4551 10480 - 10019 - | heat shock protein Hsp20 Nham_4552 10905 - 10615 - | hypothetical protein Nham_4553 11330 - 10902 - | PilT protein-like Nham_4554 11687 - 11944 + | hypothetical protein Nham_4555 11949 - 12368 + | hypothetical protein Nham_4556 14200 - 13055 - | transposase IS116/IS110/IS902 Nham_4557 14413 - 14742 + | hypothetical protein Nham_4558 15548 - 14844 - | LuxR family transcriptional regulator Nham_4559 17289 - 15988 - | conjugation TrbI-like protein Nham_4560 17752 - 17300 - | conjugal transfer protein TrbH TERM 12 17329 - 17349 + g 70 -10.3 -3.62597 | overlap 17330 TGACGGAGAGCGGAC TGGCCGGCG ACG CGCCGGCGG TTGTTGCGGCATAGG Nham_4561 18594 - 17755 - | conjugal transfer protein TrbG/VirB9/CagX Nham_4562 19274 - 18612 - | conjugal transfer protein Nham_4563 20471 - 19317 - | TrbL/VirB6 plasmid conjugal transfer protein Nham_4564 20669 - 20484 - | hypothetical protein Nham_4565 21463 - 20666 - | conjugal transfer protein TrbJ Nham_4566 23888 - 21435 - | type IV secretion/conjugal transfer ATPase TERM 13 22352 - 22320 - GR 71 -4.8 -4.41548 | gap 2 GGAGAGGGGACAAAA GGCGA-G-TGCGGCTG AGC CGTCCGCATCGTCGCC GCCAATCTCGTAATG TERM 14 22645 - 22605 - GR 79 -8.1 -4.36914 | overlap 22607 22637 GTTTGGCGGATAAAA TGGGCACGGCGCGGTCGGA CTG CCCGACCACACCGCGTTGA GGGGGATGAGGTCCG TERM 15 23505 - 23482 - GR 84 -16 -2.62396 | gap 1, overlap 23465 TAGCGCGCGAGACCA GCGCGCCGCCG CTC CGGCGGC-CGC CAGGTCAGGATGATC Nham_4567 24197 - 23898 - | conjugal transfer TrbD Nham_4568 24561 - 24190 - | conjugal transfer protein TrbC Nham_4569 25540 - 24551 - | type II secretion system protein E TERM 16 25183 - 25169 - G 74 -9.2 -3.85092 | overlap 25172 ATCATCGAGATCAAA CAGGCG CGA CGCCCG CTTGCGGATTGTAAA Nham_4570 26160 - 25537 - | autoinducer synthesis protein Nham_4571 26576 - 27790 + | cobyrinic acid a,c-diamide synthase TERM 17 28553 - 28570 + G 74 -9.9 -3.68529 | opp_overlap 28553 ATCGGGTGCGAAAAA CCTTGTC AGGT GACAAGG TTTCCATCCTGACCT TERM 18 28570 - 28553 - g 95 -9.9 -4.56775 | opp_overlap 28553 ATCGGGTGCGAAAAA CCTTGTC AGGT GACAAGG TTTCCATCCTGACCT Nham_4572 27787 - 28818 + | parB-like partition proteins TERM 19 28838 - 28855 + F 72 -9.9 -3.64703 | CGGCGTGCGGTCCGA CCTTGTC ACCT GACAAGG TTTGGCTGGACGGCG TERM 20 28973 - 28940 - f 86 -8.9 -4.58663 | gap 1, overlap 28944 AGCATGCGGTAAAAA GAAAGGCC-CCGAAAC AGT GTCCCGGAAGCCTCTC TCGTAATGTCTGGCG TERM 21 28969 - 28944 - f 82 -6.1 -4.85782 | gap 1, overlap 28940 TGCGGTAAAAAGAAA GGCC-CCGAAAC AGT GTCCCGGAAGCC TCTCTCGTAATGTCT TERM 22 29132 - 29114 - g 70 -11.6 -3.2218 | CGGAACACCTAGCAA CGACGCCC TTT GGGCGGCG ACCGATGACGCTTGG TERM 23 30365 - 30353 - g 83 -4.7 -5.03314 | CCGAGCCGCAAAAAA CGGCC CAG GGCGG CGGTTTGCAGCCGAG Nham_4573 29095 - 30420 + | replication protein C Nham_4574 30442 - 30750 + | hypothetical protein Nham_4575 30747 - 31160 + | PilT protein-like Nham_4576 32238 - 31165 - | phage integrase Nham_4577 32627 - 32241 - | PilT protein-like Nham_4578 32881 - 32627 - | Rv0623-like transcription factor TERM 24 33090 - 33100 + H 74 -6.8 -4.30014 | AAGTCATTGATCTGG CACG AAT CGTG TTTTAGGTTCATGAG TERM 25 34427 - 34447 + G 74 -10.3 -3.72588 | CATCCTGAGCATCTG GGCCGGCCG GCT CGATCGGCC TTTGCGTGTGGCTTA TERM 26 34573 - 34608 + G 74 -13.3 -3.28791 | gap 1 TGGGCGAGCATCGCC GCGCCCGGACCGCCCT GCGGG AGCGCGGTCTGG-CGC TTGTCGACGAGCAAT TERM 27 34722 - 34709 - g 76 -9.5 -4.08216 | overlap 34710 TCAGCTGGCCGAAAA GCGCG ACCG CGCGC TCGGCGCCGCCACGG Nham_4579 33183 - 34838 + | integrase catalytic subunit TERM 28 35320 - 35333 + G 74 -2.3 -4.88067 | GCTGGCGGGGACCTA TCGGC AGCA GCGGA TTTTTCTGAATGCAT Nham_4580 34835 - 35758 + | TniB TERM 29 36785 - 36731 - g 91 -9.3 -4.42386 | gap 2, opp_overlap 36731, overlap 36769 TGTCCAGCCACAAAA GCGCTCCTCAGCC-GAATACGA-GCGC CTG GCGCGTCAAATTCTGGCTGATCCGCGC TGGATTGCAGCCAAA TERM 30 36952 - 36922 - g 73 -12.6 -3.17146 | overlap 36918 36920 CTGCTCGACAAGAGA GGCCATTCCCGG CTGACGT CCGGGAATGGGC CGCAAACCCGGTCCG Nham_4581 35806 - 36975 + | hypothetical protein TERM 31 37067 - 37093 + F 82 -13.8 -3.25823 | opp_overlap 37067 CTATAAAGAGCAAAA CGACCGATAAGG CAA CATTATCGGTCG TTGGTATGCCCCGAC TERM 32 37093 - 37067 - f 100 -13.8 -4.53036 | opp_overlap 37067 CTATAAAGAGCAAAA CGACCGATAAGG CAA CATTATCGGTCG TTGGTATGCCCCGAC Nham_4582 37169 - 38113 + | hypothetical protein Nham_4583 38131 - 38829 + | putative transcriptional regulator Nham_4586 40050 - 40340 + | CopG-like DNA-binding Nham_4587 40328 - 40843 + | GCN5-related N-acetyltransferase Nham_4588 41155 - 42996 + | diguanylate cyclase TERM 33 44147 - 44180 + T 73 -10.9 -3.43654 | gap 1, opp_overlap 44128 GCCCGGGTGTTCCCG GACCG-GCGCGACCCG ACG CGGGTCGTGCACAGCC TTGTCGATATGTTTC Nham_4592 46090 - 45836 - | hypothetical protein Nham_4593 46616 - 46083 - | hypothetical protein TERM 34 46296 - 46282 - G 88 -8.5 -4.7254 | opp_overlap 46293 ACGCTCCACCAAAAA CGCCC ATCGA GGGCG CAGGCGGGCCTATTC Nham_4594 48005 - 46677 - | hypothetical protein TERM 35 49325 - 49315 - H 76 -6.8 -4.48299 | overlap 49316 49319 CCAGAGGCAAAGAAA CGCA TCG TGCG GACGGTGATCGACGA Nham_4597 50051 - 50476 + | transposase IS200-like TERM 36 50496 - 50480 - f 75 -12.3 -3.29043 | overlap 50461 AAGGTCGTCTGACAA TCGACCC GAA GGGTCGA TCAAATCCGGCTTCC TERM 37 51593 - 51623 + G 74 -5.3 -4.63218 | overlap 51595 CTCTCGGCACTGCTC GATCCGGTGCCAC TCGGC GTTGCACTGGGCC TTTTCTTCGGCAAGC Nham_4598 50684 - 51910 + | Na+/H+ antiporter NhaA TERM 38 52769 - 52756 - g 84 -4.5 -5.20333 | overlap 52757 CACCCACAAGAAAAA CGAGC ACTG GCTCA AGGCCCACCCCAACG Nham_4599 51953 - 53017 + | putative transposase TERM 39 53183 - 53193 + G 76 -8.2 -4.14627 | overlap 53182 CAGGTTCGTCGTCAT CGCG TGG CGCG TTCTTTGTCTGAGCG Nham_4600 53096 - 54199 + | feruloyl esterase TERM 40 54512 - 54489 - f 70 -12.4 -2.70932 | opp_overlap 54475 TCCTGGCGCTAAGGA CCGGCCAGGT TTTG ACCTGGGCGG CGCCGTGACCGACGC Nham_4601 54790 - 55854 + | fatty acid desaturase Nham_4602 55920 - 56873 + | esterase, PHB depolymerase TERM 41 57660 - 57649 - T 76 -4.4 -4.86001 | opp_overlap 57659 ACGAGCGCAGAAAAA CAGT AATA ACTG TCGGGCCATCCCCGA Nham_4605 61258 - 57980 - | MCP methyltransferase, CheR-type TERM 42 59641 - 59628 - G 71 -5.3 -4.46212 | opp_overlap 59628 CTGTCGATCACAAAA TATGC AGGC GCATA TTTATCCATGGCGCG Nham_4606 61805 - 61332 - | hypothetical protein Nham_4607 62000 - 63430 + | resolvase-like protein TERM 43 65653 - 65639 - T 73 -2.8 -4.84761 | ACAGTCCGATAAAAA GACTCA TGG TGAACC CGATGCCGCACAGCA TERM 44 65811 - 65778 - T 70 -3.7 -4.56597 | gap 1, overlap 65781 65782 65784 CTGCTTGCCGAAAAA CAACCAGCGGCGACGC CAA GCGTCACCGG-AGCAG TAATGGTCGCCCAGT TERM 45 65809 - 65781 - T 72 -6.5 -4.40561 | overlap 65778 65782 65784 CTTGCCGAAAAACAA CCAGCGGCGACGC CAA GCGTCACCGGAGC AGTAATGGTCGCCCA TERM 46 65806 - 65784 - T 71 -11.2 -3.17725 | overlap 65782 65781 65778 GCCGAAAAACAACCA GCGGCGACGC CAA GCGTCACCGG AGCAGTAATGGTCGC Nham_4611 68224 - 66743 - | sulphate transporter TERM 47 67637 - 67613 - G 85 -5.7 -5.09426 | GGGAATTGCAAAAAA GGGCAAGCT AGAGGGG AGCTCACCC ATATCGCCGACCGTG TERM 48 69380 - 69359 - H 77 -8 -4.2558 | gap 1 CATGTTGGATTAAAA GCGG-GCCA TGCTG TGGCGCCGC GGCGTCATCCGCGCG Nham_4613 69424 - 70143 + | hypothetical protein Nham_4614 70140 - 70376 + | hypothetical protein Nham_4615 70485 - 70940 + | hypothetical protein Nham_4616 70996 - 71265 + | hypothetical protein Nham_4617 71429 - 72160 + | transposase, IS111A/IS1328/IS1533 Nham_4618 74013 - 72649 - | signal transduction histidine kinase Nham_4620 75144 - 74752 - | rhodanese-like protein Nham_4621 76163 - 75255 - | beta-lactamase-like Nham_4622 76979 - 76176 - | hypothetical protein TERM 49 76351 - 76337 - G 86 -7 -4.98255 | overlap 76339 CGCCAAGCACAAAAA GCGCGG CGA CCGCCC AGTCAACGAAACCTG Nham_4623 77431 - 76976 - | protein of unknown function DUF395, YeeE/YedE Nham_4624 77860 - 77435 - | protein of unknown function DUF395, YeeE/YedE TERM 50 77864 - 77880 + H 70 -2.1 -4.8622 | overlap 77867 AAAATTATCCACGGG GAACGCG CCT CACGGTC TTTTTGCTTCGGGAC TERM 51 78556 - 78572 + H 79 -13.7 -3.07113 | GGCCCTGGTAATCGG GCCGCGA CCA TCGCGGC TTGCATCGCCTGCTC Nham_4625 79116 - 79433 + | hypothetical protein TERM 52 79485 - 79467 - T 79 -13.1 -3.25823 | opp_overlap 79467 CTCCCCTTACACGAA GGCCGCC CAATC GGCGGCC TTTTCTGTGCGCGCT TERM 53 79467 - 79485 + T 100 -13.1 -4.52857 | opp_overlap 79467 CTCCCCTTACACGAA GGCCGCC CAATC GGCGGCC TTTTCTGTGCGCGCT Nham_4626 80317 - 79517 - | transposase IS116/IS110/IS902 TERM 54 80532 - 80552 + H 95 -10.3 -4.82901 | GTTTGCACGACTGGC CGCGGGCGG CAT TCGCCGGCG TTTTTGTCAACAAGC Nham_4629 80954 - 81574 + | hypothetical protein Nham_4630 84042 - 81637 - | copper-translocating P-type ATPase Nham_4631 84113 - 84517 + | hypothetical protein Nham_4632 84543 - 84896 + | hypothetical protein TERM 55 85888 - 85925 + G 73 -11.2 -3.61103 | opp_overlap 85888 GCATCGACCGCAAGA CCCGCGATCCCGAAAG CACGCC CTTCCGCGAACGCGGG TTTGACATCCAGTTC TERM 56 85925 - 85888 - g 75 -13.4 -3.06492 | opp_overlap 85888 GCATCGACCGCAAGA CCCGCGATCCCGAAAG CACGCC CTTCCGCGAACGCGGG TTTGACATCCAGTTC TERM 57 86293 - 86278 - g 75 -11.8 -3.57263 | AGTCCGACCTGCAAA CCGCCG TCAA CGGCGG CGGCAGCGGAGAAGG Nham_4633 84906 - 86363 + | outer membrane efflux protein Nham_4634 86375 - 87763 + | twin-arginine translocation pathway signal Nham_4635 87811 - 88110 + | hypothetical protein Nham_4636 88159 - 88671 + | hypothetical protein TERM 58 88847 - 88861 + G 71 -11.4 -3.45023 | CCAAATTGGTTGGTG CCGCGA TCC TCGCGG TTGTGATCGTGCTGG TERM 59 89195 - 89171 - g 79 -9.4 -4.14739 | gap 1 CCATCGATCCCAAAA CCGTGTTCTGG GTCA CCA-AACACGG CTTGAAGATGAGCGG Nham_4637 88828 - 89445 + | cytochrome c family protein Nham_4638 89872 - 90297 + | hypothetical protein Nham_4639 90907 - 90404 - | hypothetical protein TERM 60 90757 - 90775 + g 100 -5.8 -5.66338 | opp_overlap 90751, overlap 90751 90750 CCTTCAAGACGGCCG CGAGGAGC TTC GCGCCGCG TTTTTTCTTGTATTT Nham_4640 91245 - 90904 - | putative regulator PrlF Nham_4641 92598 - 91708 - | UbiE/COQ5 methyltransferase Nham_4643 93376 - 92795 - | putative thiol--disulfide interchange redox-active center transmembrane protein Nham_4644 94065 - 93394 - | hypothetical protein Nham_4645 94697 - 94062 - | sigma-24 (FecI-like) Nham_4646 95274 - 95618 + | integral membrane protein-like TERM 61 95625 - 95656 + F 81 -13 -3.53012 | gap 1, opp_overlap 95623, overlap 95627 TCAGCCTGAAGCATC GACGGGCGGACG-GC CCT GTGCGTCCGCCCGTG TTTCCCCCAACGCGC TERM 62 95627 - 95654 + F 87 -15.6 -3.34398 | gap 1, opp_overlap 95623, overlap 95625 AGCCTGAAGCATCGA CGGGCGGACG-GC CCT GTGCGTCCGCCCG TGTTTCCCCCAACGC Nham_4647 95686 - 96582 + | hypothetical protein TERM 63 97264 - 97235 - g 70 -9.9 -3.54129 | opp_overlap 97234 97233 97227 CACACGGTCGCGAAA GCCGCCGAACTCG CCGG CGAGTGTGACGGC CGTTTCGATCTCTCG Nham_4648 96566 - 97372 + | hypothetical protein TERM 64 97556 - 97569 + G 75 -3.7 -4.77775 | GGTTCTTGTCGCTGT CGCCG AGCA CGGAG TTTCTTTTCTCAGAT Nham_4649 97369 - 97893 + | DoxX TERM 65 99432 - 99419 - f 86 -4.5 -5.20333 | overlap 99420 CACCCACAAGAAAAA CGAGC ACTG GCTCA AGGCCCACCCCAACG Nham_4652 100368 - 100550 + | hypothetical protein TERM 66 100775 - 100750 - f 71 -10.3 -3.6288 | overlap 100742 100751 AAATCAAGCGGGAAA GGTCCGGCGCG CAGA CGCGCCGGAGA AAGGCAATGGAAAAG TERM 67 100774 - 100751 - f 76 -13.8 -2.77005 | overlap 100742 100750 AATCAAGCGGGAAAG GTCCGGCGCG CAGA CGCGCCGGAG AAAGGCAATGGAAAA Nham_4653 100782 - 101750 + | hypothetical protein TERM 68 102343 - 102369 + G 76 -13.6 -3.19602 | opp_overlap 102335, overlap 102341 CAGACGACGGCTGGG CCGAGCACCTGC GTG GCAGGCGCACGG TGTTGGTCTACGGCG Nham_4654 101892 - 102491 + | hypothetical protein TERM 69 103083 - 103114 + F 88 -14.5 -3.59979 | gap 1, opp_overlap 103074 AGACCACGCGAACTT CGCGATAGCCTGGC CGCAC GCCGGGCT-TCGCG TTTCCGCTGCCGGCG TERM 70 104162 - 104149 - g 71 -8.1 -3.93695 | GGCACCATGGACAAA GCGGA TTCC TCCGC CCGCGAGCACATCGC TERM 71 104757 - 104742 - g 73 -3.2 -4.77036 | CCGCATCATCAAAAA GCTGAT CCCG ATCCGC GATGCCGTGCGCGGG TERM 72 105811 - 105825 + G 100 -12.8 -4.84918 | CATCTGAAGCTCCCG GGCGCC TCT GGCGCC TTTTCTCTTTATGGG TERM 73 107186 - 107171 - g 71 -6 -4.37886 | TCAGCGTCGAGAAAA GCCGCG GCTT CTCGGC CTATCGCTGGATCAG Nham_4656 103222 - 108324 + | N-6 DNA methylase Nham_4657 108749 - 108321 - | XRE family transcriptional regulator Nham_4658 109057 - 108752 - | hypothetical protein TERM 74 109644 - 109629 - g 74 -9 -3.90112 | overlap 109633 CGGGCCTCAAGGAAA TCGACG TGCT CGTCGA CGAGACGGCGGACGA Nham_4659 109403 - 111076 + | ParB-like nuclease TERM 75 111106 - 111130 + F 100 -17.1 -3.81488 | opp_overlap 111102 CTTCCGAACGATCTG CCGCCGCCGGT CTC GTCGGCGGCGG TTCTGTTTCCACACC Nham_4660 111168 - 111644 + | hypothetical protein TERM 76 111673 - 111700 + G 100 -21.4 -3.53811 | opp_overlap 111673 CACTCGCACAGACAA TGAAGCCCCCGG TTTT CCGGGGGCTTCA TTTGGCCGCAGTGCA TERM 77 111700 - 111673 - g 100 -21.4 -3.59202 | opp_overlap 111673 CACTCGCACAGACAA TGAAGCCCCCGG TTTT CCGGGGGCTTCA TTTGGCCGCAGTGCA Nham_4661 111641 - 112510 + | hypothetical protein TERM 78 112854 - 112876 + G 74 -12.7 -3.29511 | gap 1 CGCTGCAGCCAGCGA CGCCGCGCGC GATC GCGC-CGGCG TTATGGCGCCGTCCC Nham_4662 112507 - 112920 + | hypothetical protein Nham_4663 112913 - 113257 + | hypothetical protein TERM 79 113511 - 113525 + F 84 -2.7 -5.40072 | CGGACCTGGAAGCGC CCGTC ATTCC GCCGG TTTTTTTCGACCGCA TERM 80 113570 - 113551 - f 81 -15 -2.53876 | CCGCACCCGAAGGGA GGACCGGC AGGA GCCGGTCC AGGCCTTCAGGAAAC Nham_4664 113605 - 114195 + | hypothetical protein TERM 81 114203 - 114224 + F 87 -12.9 -3.82664 | opp_overlap 114166, overlap 114204 TCGGGTGAGGGCCGC CGGCGGGGC TTCG GCCCCGCCA TTCTCTTCTCTCTAT TERM 82 114204 - 114223 + F 87 -16.4 -2.88514 | opp_overlap 114166, overlap 114203 CGGGTGAGGGCCGCC GGCGGGGC TTCG GCCCCGCC ATTCTCTTCTCTCTA Nham_4666 114944 - 115249 + | RelB antitoxin TERM 83 115389 - 115421 + G 81 -16.1 -2.78384 | overlap 115414 CGACTTCCCGGAGAG CGGCCGTCTCGGCCG TCT CGGCCGTCTCGGCCG TGTCGTCGGCACCCG Nham_4667 115246 - 115557 + | addiction module toxin, RelE/StbE Nham_4668 116307 - 115915 - | hypothetical protein Nham_4669 117151 - 117630 + | single-strand binding protein TERM 84 117644 - 117666 + T 95 -17.7 -3.58854 | GAGCGAGATGGCAAG GGCCCGGCG TAAGC CGCCGGGCC TTCTGCTTGTCATTG Nham_4670 117969 - 117712 - | hypothetical protein Nham_4671 118517 - 118053 - | nuclease (SNase-like) Nham_4672 120813 - 118888 - | TRAG protein Nham_4673 121015 - 120800 - | conjugal transfer TraD Nham_4674 121280 - 121020 - | conjugal transfer protein TraC TERM 85 121262 - 121272 + g 80 -4.6 -4.8622 | TTTCGTCCCTGATCT GCCG CGA TGGC TTTTTCATTCCGGAC SEQUENCE gi|92115633|ref|NC_007964.1| Nitrobacter hamburgensis X14, complete genome (length 4406967) TERM 1 1425 - 1405 - g 72 -13.9 -2.71712 | opp_overlap 1421, overlap 1404 TTCGCTGCCCGAAAT CGGCCGCCG GTT CGGAGGCCG CGATCATACCACCGT dnaA 107 - 1534 + | chromosomal replication initiation protein TERM 2 1614 - 1575 - f 100 -15.6 -4.10855 | gap 1 AAAATGGCGGGAAAA GGCCGGACCGGGGCGAGCC GCA GGCTTGCACCGGAC-GGCC ATCCGCGTCACCTTG TERM 3 1930 - 1904 - g 73 -11.4 -3.65902 | overlap 1919 TGGAGGTGACGGAAA CGCTGGCGGCGG AAA CCGCAACCGGCG GCGCGACCACGGTTC TERM 4 2255 - 2244 - g 76 -5.8 -4.59773 | overlap 2245 2249 CGGCAGCGCCAAAAA CGCA ACGC TGCG CGGCGTCGCCACCGA Nham_0002 1738 - 2856 + | DNA polymerase III subunit beta recF 3021 - 4160 + | recombination protein F gyrB 4459 - 6900 + | DNA gyrase subunit B Nham_0005 8228 - 7095 - | hypothetical protein TERM 5 7530 - 7512 - G 81 -13.8 -3.61715 | overlap 7513 CACGGTTCGCAACAA CGGGCCGG TGT CCGGCCCA TGGGACAGCCGCGCC TERM 6 7529 - 7513 - G 78 -15.1 -2.76815 | overlap 7512 ACGGTTCGCAACAAC GGGCCGG TGT CCGGCCC ATGGGACAGCCGCGC TERM 7 8387 - 8371 - H 78 -11.5 -3.65902 | TCGACCCGATCGAAA CCGGGAC AAC GCCCCGG CGCCCGTCAAGGATG TERM 8 8834 - 8815 - g 71 -8.6 -3.85698 | overlap 8816 CGCCGCTCCGAGAAA CGCTTCGA GCGG TCGAAGCA CGATCCCCAACCCAT Nham_0006 8563 - 9120 + | hypothetical protein Nham_0007 9896 - 9150 - | hypothetical protein Nham_0008 10241 - 9957 - | hypothetical protein Nham_0009 10492 - 11412 + | Pirin-like Nham_0010 12420 - 11419 - | PfkB TERM 9 12627 - 12653 + G 71 -5.1 -4.47328 | gap 2, overlap 12629 CCTGACCGCGGCGCT GC-TCGGCG-CGG GCC CGGTCGCCGATGC TTTTCTGATGGCGTT Nham_0011 12511 - 14100 + | integral membrane protein MviN TERM 10 14957 - 14939 - g 79 -8.1 -4.25104 | gap 1, opp_overlap 14949 14950, overlap 14950 GCCGTCGGAGGAAAA GGGGCTGG AAAG CC-GCCCC GAAGCCGACAATCTC TERM 11 14989 - 14950 - g 75 -12 -3.55203 | opp_overlap 14950 14949, overlap 14939 AAAAGGGGCTGGAAA GCCGCCCCGAAGCCGACA ATCT CGTCGGCATCTATGCGGC ATTGTCAGGGAAACC Nham_0012 14196 - 15239 + | tryptophanyl-tRNA synthetase TERM 12 15338 - 15366 + F 76 -12.5 -3.12207 | overlap 15336 CACAGCCCAGAGCCT TTCCGCTTCTGAT GGA ATCAGAAGCGGGC TCTATGATTTTGATT Nham_0013 15511 - 15861 + | ISGsu3, transposase Nham_0014 15896 - 16621 + | transposase, IS4 Nham_0015 16865 - 17359 + | hypothetical protein Nham_0016 17538 - 18113 + | nitrogen-fixing NifU-like Nham_0017 19273 - 18143 - | hypothetical protein TERM 13 18378 - 18399 + g 91 -12.3 -4.3467 | gap 1 GACAGCTCGTAGGTG TGCGGCGGCG TCA CGCCGC-GCA TTTTCCTGTCGGCAT TERM 14 18936 - 18982 + g 78 -14.3 -3.10641 | gap 1, opp_overlap 18908 18927 18926, overlap 18961 AGCAATGCCGTGCGG GCCCGCGCGGCGG-GATCGTCG ATGC TGGCGGCAGCCGCCGTGCGGGC TTCGGTCGTCCCTTG Nham_0018 19577 - 20275 + | peptidase M22, glycoprotease Nham_0019 20272 - 20754 + | ribosomal-protein-alanine acetyltransferase Nham_0020 20911 - 21360 + | ferric uptake regulator family protein Nham_0021 21543 - 22964 + | tRNA-i(6)A37 modification enzyme MiaB Nham_0022 22969 - 24018 + | PhoH-like protein TERM 15 24065 - 24034 - g 84 -10.9 -4.11692 | gap 3, overlap 24037 CATGGATGTCGAAAA CGACCGGC--CGCCGC GAC GCGGCGCTGCCGG-CG AAAGAAATTCCGGAA Nham_0023 24020 - 24592 + | hypothetical protein TERM 16 25108 - 25078 - g 78 -6.7 -4.67234 | gap 1, overlap 25069 25079 25080 AGCGAAGCGCAAAAA GGCGCCGCCGGCCG GCCT CGACCTGC-GCGCG ATCGATCTGGCGCTG TERM 17 25641 - 25597 - g 86 -17.8 -2.70932 | gap 2 CGGGTTGCGCAAGGA GCGGCC-CGC-CGTCCGCCCGC GCG ACGGGCGGCGGCGCGAGGCCGC GCCGGATGCGCCCTC Nham_0024 24593 - 25717 + | CBS:transporter-associated lnt 25714 - 27339 + | apolipoprotein N-acyltransferase Nham_0026 27538 - 27957 + | XRE family transcriptional regulator trmB 27995 - 28762 + | tRNA (guanine-N(7))-methyltransferase TERM 18 28787 - 28743 - f 71 -10.7 -3.59979 | gap 1, opp_overlap 28742 GGTTTCGACGCGAAA GCGACGCCGCACAGGCCTGA CCTCTT TCAGACCGGTGCC-CGCCGC CTCTTCGCATCGCGG TERM 19 28923 - 28947 + F 100 -13.5 -5.4833 | ACGACCACGTATCGA GAGTGGGGCCC GTC GGGACCCGCTC TTTTTTATTACCTGA Nham_0028 29091 - 29882 + | hypothetical protein TERM 20 29990 - 29951 - g 73 -8.7 -4.07568 | GGTGGCGCGGGAAAA GTCCATCGACCGCGGC-AT CGTG ATCGCCGCGATGGA-GGAC GCCATCGCCAAGGCG TERM 21 31477 - 31455 - g 77 -12.6 -3.54424 | overlap 31440 31456 31467 GCCGACCTTGCGAAA TCGGCGGAGG AAG CCCCCGCCGC CGAAGATCAGCCGGC TERM 22 31476 - 31456 - g 81 -16.1 -2.72511 | overlap 31440 31455 31467 CCGACCTTGCGAAAT CGGCGGAGG AAG CCCCCGCCG CCGAAGATCAGCCGG nusA 29886 - 31496 + | transcription elongation factor NusA TERM 23 32081 - 32044 - g 72 -4.2 -4.64676 | gap 3, overlap 32046 32047 CTATCGTTAAGAAAA CAGCCGCGGAGT-CCCGCG AAA CGCGGGAAATCC-CGG-TA ATCAGCGCGCTGGCG Nham_0030 31572 - 32237 + | hypothetical protein TERM 24 32335 - 32322 - g 73 -3.1 -4.8048 | overlap 32334 GGTTGATACGAAAAA TCCTG GCGA CAAGA CTCTGAGCGTCGGCC TERM 25 32502 - 32446 - g 81 -12 -3.85698 | GTGGTGGTCGAGAAA CGAGGCAAGCGCCGGATCGGTGGCGA CGCTC CCGCCGCGGAACCGGTGGCGGCCTCG GAGCCGACAGTCGCG TERM 26 32911 - 32858 - g 70 -7.2 -4.09685 | gap 1, opp_overlap 32869, overlap 32861 CCGCACCGGCCAAAA CCACGACCACGACCACGCGCG-CGG CACCC CCGGCGCGCCCGGCTGCTGTCGCCG CCGACGGCAGCGACG infB 32305 - 34911 + | translation initiation factor IF-2 rbfA 35047 - 35460 + | ribosome-binding factor A TERM 27 35520 - 35480 - g 79 -9 -4.21908 | gap 1, overlap 35482 CATGACGACGCAAAA CA-GCGCATTCGATTCGCC CATC GCCGAACCGGACGCGCCTG AAAAAAATAATTCTG TERM 28 35517 - 35482 - g 78 -11.8 -3.70674 | overlap 35480 TGACGACGCAAAACA GCGCATTCGATTCGCC CATC GCCGAACCGGACGCGC CTGAAAAAAATAATT TERM 29 35789 - 35736 - g 78 -4.6 -4.69214 | gap 2, opp_overlap 35748 35774, overlap 35738 35744 35745 35747 GAGGGAAGAAAGAAA CAGAACAA-TCAGCCGCGC-CGTGAC AAGC GCGACGTGCACGGCTGGGTCGTTCTC GACAAGCCTGTCGGC TERM 30 35780 - 35744 - g 70 -7.2 -4.10632 | gap 1, opp_overlap 35748 35774, overlap 35738 35736 35745 35747 AAAGAAACAGAACAA TCAGCCGCGC-CGTGAC AAGC GCGACGTGCACGGCTGG GTCGTTCTCGACAAG TERM 31 36417 - 36450 + G 79 -9.6 -4.14392 | gap 2, opp_overlap 36417 GCTTTGTGCAATAGA GCGGCATCCGGCGAGG GAAG CCTCGCCG-ACGC-GC TTTTGCCCGTTGAGA truB 35466 - 36704 + | tRNA pseudouridine synthase B rpsO 36707 - 36976 + | 30S ribosomal protein S15 TERM 32 36986 - 37003 + F 73 -12.7 -2.80816 | opp_overlap 36983 36982 CGCTGAGCAAAGTCC GCGCGCA TCTC TGCGCGC TGTAATGCGTGGACG TERM 33 37068 - 37051 - f 75 -5.6 -4.59773 | TGTGATCTGCAAAAA GCGAAA TCCGGT TTTCGC AAACAGATCATGCCC TERM 34 37191 - 37238 + F 79 -13.5 -3.05536 | gap 2, opp_overlap 37183 37180 AAAACCATGGCAGGA TCGCCGGACGCCGACGCCGCAAC CATC GTTGTGGC--CAGCGTCCGGCAA TCTTGCGCATGGTTT TERM 35 39452 - 39433 - g 82 -5.6 -4.93318 | gap 1, opp_overlap 39438 CACAAGGCAGAAAAA GCCGACGCG CCG CGCGA-GGC TGCGGGCGAGTAATT Nham_0035 37219 - 39465 + | polynucleotide phosphorylase/polyadenylase TERM 36 39511 - 39492 - T 100 -15 -4.19238 | opp_overlap 39492 TGGTGAATTGCAAAA GGGCGGCT TTCG AGCCGCCC TTTTTGTTTCCAGCA TERM 37 39492 - 39511 + T 100 -15 -5.27335 | opp_overlap 39492 TGGTGAATTGCAAAA GGGCGGCT TTCG AGCCGCCC TTTTTGTTTCCAGCA Nham_0036 40584 - 39679 - | LysR family transcriptional regulator Nham_0037 40839 - 43028 + | catalase/peroxidase HPI TERM 38 43111 - 43078 - f 78 -10.9 -3.64162 | opp_overlap 43083, overlap 43082 43083 ACGAACCACGCCAAA CCAAGGCCCCCGCGA TCCG TCGCGGGGGCTTTTC ATTTGCCCCGGGGCA TERM 39 43107 - 43082 - f 90 -16.1 -3.53298 | opp_overlap 43083, overlap 43078 43083 ACCACGCCAAACCAA GGCCCCCGCGA TCCG TCGCGGGGGCT TTTCATTTGCCCCGG TERM 40 43083 - 43106 + F 100 -19.6 -4.54727 | opp_overlap 43082 43078 43083 CCACGCCAAACCAAG GCCCCCGCGA TCCG TCGCGGGGGC TTTTCATTTGCCCCG TERM 41 43106 - 43083 - f 100 -19.6 -2.71497 | opp_overlap 43083, overlap 43082 43078 CCACGCCAAACCAAG GCCCCCGCGA TCCG TCGCGGGGGC TTTTCATTTGCCCCG Nham_0039 43662 - 44258 + | glutathione S-transferase-like Nham_0040 45261 - 44413 - | enoyl-(acyl carrier protein) reductase TERM 42 44575 - 44559 - G 100 -11.5 -4.73677 | overlap 44560 CCGACAACAAATAAA GCCCGGC GCC GCCGAGC TCGTCGAGACTGACG Nham_0041 46650 - 45427 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 43 46463 - 46453 - G 86 -8.2 -4.56597 | overlap 46454 GCCCTCCGCCAAAAA GCGC ATT GCGC GGCGATCGATCACAT Nham_0042 47260 - 46736 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 44 47303 - 47320 + H 71 -7 -4.18018 | opp_overlap 47302 47303 ATGACGGTTCGAAAG GCGCAA CGAAAC TTGCGC TTTTGCCTGGACGGC TERM 45 47325 - 47365 + H 100 -18.9 -2.87211 | GAAACTTGCGCTTTT GCCTGGACGGCGCCGGTCC TGG GGATCGGCGCCGCGGAGGC TCTCTAACACAGGGT TERM 46 47829 - 47801 - H 74 -6 -4.53705 | overlap 47803 47804 AATTTGCAGAGAAAA TATGGCG-GGCGTC GCA GCCGCCTCGCC-TA CGGTCCGGGCTTATG TERM 47 48081 - 48070 - g 76 -5.8 -4.56775 | overlap 48072 48073 ATTGTGGCCGAAAAA GACG TTGA CGTC GCGGCGATCCGCCAC Nham_0043 48031 - 48528 + | ferric uptake regulator family protein Nham_0044 49182 - 48625 - | hypothetical protein TERM 48 50223 - 50259 + G 71 -13 -3.09968 | gap 1, opp_overlap 50214 50237 CCACAACCGCAAGCC GGTGGCGCCGAAGATCG CCGA CGAACT-CGGCGCGACC TATTGGGATTCGCTC Nham_0045 49669 - 50670 + | glycolate reductase Nham_0046 51618 - 50818 - | UBA/THIF-type NAD/FAD binding fold TERM 49 51105 - 51115 + g 90 -2.4 -5.52384 | AGGTCGGGTTGAACT CGCC GTC GGCA TTTTTTTCGTGGCCG TERM 50 51167 - 51184 + g 78 -3.3 -5.00616 | gap 1 TCGAACACCCCTAAC GCGGC-GG TCA CCAGCGGC TTTTTTGCGAGAAAG TERM 51 51771 - 51733 - H 71 -6.9 -4.13654 | gap 2, opp_overlap 51733, overlap 51729 51770 GCGTCAAATCATAAA GCTGGAGCCCGGCTTTGAT TCC ATCAAAGCCGGAAT--AGC TCTAGCCGCTGTTAC TERM 52 52400 - 52385 - g 73 -8.2 -3.97042 | CGAGCACGAACGAAA GCAGCC CGCC GGCCGC AAGATCGCCTACAGC TERM 53 52954 - 52917 - g 78 -15.5 -2.70932 | gap 1, opp_overlap 52949 TCGGTTGCGCAAGGA GCGGACGGCGGCGAACCG GCG CTGT-CGCCGGCGCCCGC ATTGGGCTTTTCCGG Nham_0047 51840 - 53186 + | peptidoglycan binding domain-containing protein Nham_0048 54110 - 53229 - | formamidopyrimidine-DNA glycosylase TERM 54 53301 - 53315 + g 83 -7.8 -4.59773 | TACCGTGCCCCTGCA TGTCGG CGT CCGGCA TTTTTCGCCCTCGCG TERM 55 53559 - 53610 + g 90 -8.5 -4.82901 | gap 1, overlap 53561 GCACACATAGATGTT GCCCAGCCCCGCGACCACGC-GCT GGTCG AGCAGCGCGGCCTTGAGGCTGGTC TTTTTGTCGCGGCAC TERM 56 53561 - 53608 + g 76 -9.7 -4.03995 | gap 1, overlap 53559 ACACATAGATGTTGC CCAGCCCCGCGACCACGC-GCT GGTCG AGCAGCGCGGCCTTGAGGCTGG TCTTTTTGTCGCGGC TERM 57 54691 - 54702 + G 70 -7.2 -4.0641 | opp_overlap 54691 TTTCGCGTGCTGAAA CCGG GCGG CCGG TTTCTCTGCCTCGAA ubiE 54202 - 54963 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 58 55245 - 55256 + G 70 -7.2 -4.07568 | opp_overlap 55234 GAAAGCCTGCAGGAC CGGC TGCC GCCG TTTTCGCAGGCCGAG TERM 59 55530 - 55487 - g 73 -10.9 -3.61398 | gap 1, overlap 55488 TTTCGTCGCCAACAA GGCCGAAGCGCATTCCGCCG AAGCG CGGCGGC-TGCGCCTCGTCG AAGTCATCAACACCA TERM 60 55529 - 55488 - g 75 -14.4 -2.76696 | gap 1, overlap 55487 TTCGTCGCCAACAAG GCCGAAGCGCATTCCGCCG AAGCG CGGCGGC-TGCGCCTCGTC GAAGTCATCAACACC Nham_0050 54972 - 56528 + | 2-polyprenylphenol 6-hydroxylase Nham_0051 56591 - 58030 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase Nham_0052 58027 - 58485 + | deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) TERM 61 59310 - 59299 - g 72 -7.2 -4.21194 | opp_overlap 59298 59299 CCGCAGGATGCAAAA CCGC CTTT GCGG ATTCTTGCGTTCGGC Nham_0053 58867 - 61383 + | PAS/PAC sensor signal transduction histidine kinase TERM 62 61828 - 61868 + G 81 -12.3 -3.85698 | opp_overlap 61816, overlap 61829 TCACCGGCTACGGCA ACGCCGCGGCGCAGGTCGC GCG GCTGGCGGCGCTGCGGCGG TTTCTCGACGACGCC TERM 63 61829 - 61867 + G 79 -15.8 -2.91276 | opp_overlap 61816, overlap 61828 CACCGGCTACGGCAA CGCCGCGGCGCAGGTCGC GCG GCTGGCGGCGCTGCGGCG GTTTCTCGACGACGC Nham_0054 61380 - 62903 + | hypothetical protein TERM 64 63317 - 63287 - g 85 -3.1 -5.34365 | gap 1, overlap 63289 63290 63305 CGACAAGAAGAAAAA GACCG-GCCGGCGC AACG ACGCCACCGCGGAC GCCTGATCCGCACCG Nham_0055 63003 - 63323 + | hypothetical protein TERM 65 63889 - 63901 + G 74 -10.5 -3.7104 | GGCGCTGCCGCTGCT CGGCG ACG CGCCG TTCTTCCATCTCAAT Nham_0056 63590 - 64312 + | nucleotidyl transferase TERM 66 66609 - 66559 - g 73 -11.2 -3.54424 | gap 3, opp_overlap 66589 CTGCACCGGCTCAAA GC-CGTCGCCGGCCCGGAACGCTGG GCAA CC-GCGCTGCAAGCCGGC-ACGCGC TACGTTCAATACGCC TERM 67 66699 - 66679 - g 81 -10.3 -4.18494 | opp_overlap 66684 66685, overlap 66682 CAGCCCGAGCCAAAA CCACCGCGC GCG GCGCGGCCG ACGCGATTGTCGGTG TERM 68 66696 - 66682 - g 73 -12.8 -3.11208 | opp_overlap 66684 66685, overlap 66679 CCCGAGCCAAAACCA CCGCGC GCG GCGCGG CCGACGCGATTGTCG TERM 69 66914 - 66961 + G 86 -18.4 -2.78463 | gap 1, opp_overlap 66888, overlap 66912 66928 66953 TGTTGCGCGCCATCG GCGAGAGCCGTTTCGCGCCGCTG ATG CAGCGGCCCGAAGC-GCGCGCGC TGTGGTGGCCGCGCT TERM 70 66928 - 66975 + G 70 -10.4 -3.54424 | gap 1, overlap 66914 66953 GGCGAGAGCCGTTTC GCGCCGCTGATGCAGCG-GCCCG AAG CGCGCGCGCTGTGGTGGCCGCGC TTTCAACGCATCGCG Nham_0057 64411 - 67560 + | hypothetical protein TERM 71 67617 - 67629 + G 73 -6.9 -4.34402 | overlap 67607 CAGCGCGCGTCCGAC CCGGC GAC GTCGG TTTTCGTCTCGGCCA Nham_0058 67557 - 71045 + | UvrD/REP helicase Nham_0059 71144 - 71464 + | thioredoxin TERM 72 71490 - 71510 + T 100 -15.4 -5.27938 | opp_overlap 71490 TTGGAATTCAGCAAA CGGCCGGC TCATC GCCGGCCG TTTTTATTTGCGCCT TERM 73 71510 - 71490 - T 100 -15.4 -3.794 | opp_overlap 71490 TTGGAATTCAGCAAA CGGCCGGC TCATC GCCGGCCG TTTTTATTTGCGCCT TERM 74 71531 - 71552 + T 72 -8.7 -3.80133 | overlap 71529 ATTTGCGCCTGCTTT CTTTCTCCC TTGT GGGAGAGGG TGTTTTATCGGCGTC Nham_0060 73036 - 71708 - | FolC bifunctional protein TERM 75 72943 - 72962 + g 78 -6.4 -4.62069 | overlap 72942 GGATGCGCCACATCC GATCGAGC GTGA GATCGATC TTTTTCGGATGCAGC TERM 76 72997 - 73011 + g 79 -9.2 -4.15044 | AGATCCGCGCGACGA CGTCGC CAA GCGGCG TTTGTTGGGGCAGAG Nham_0061 73977 - 73033 - | acetyl-CoA carboxylase subunit beta trpA 75000 - 74164 - | tryptophan synthase subunit alpha Nham_0063 76241 - 74997 - | tryptophan synthase subunit beta Nham_0064 77066 - 76389 - | N-(5'-phosphoribosyl)anthranilate isomerase TERM 77 76508 - 76551 + g 81 -15.2 -3.06796 | gap 1, opp_overlap 76508 76510 CCACGCCCGAGGAGA CATCGACGCCGCCGGCGCGGG TGG TCCGGACCG-CGGCGTCGACG TTGCCTGCAGTGAGC TERM 78 76551 - 76508 - G 87 -18.9 -2.78816 | gap 1, opp_overlap 76508, overlap 76510 CCACGCCCGAGGAGA CATCGACGCCGCCGGCGCGG GTGGT CCGGACC-GCGGCGTCGACG TTGCCTGCAGTGAGC TERM 79 76549 - 76510 - G 90 -17.9 -2.94218 | gap 1, opp_overlap 76508, overlap 76508 ACGCCCGAGGAGACA TCGACGCCGCCGGCGCGG GTGGT CCGGACC-GCGGCGTCGA CGTTGCCTGCAGTGA TERM 80 76701 - 76685 - G 86 -7.9 -4.67982 | overlap 76687 GCGCATCGAACAAAA CGCGGTC GGC GACGGCG GCATAGCCGGGCAGC Nham_0065 77691 - 77344 - | hypothetical protein ihfB 78082 - 77777 - | integration host factor subunit beta TERM 81 78201 - 78173 - R 79 -13.8 -3.09015 | opp_overlap 78186 CGGACAGTTAGCGAA GCCGCCGCGACG GCCCG CGCCGCAGCAGC GAAGGTTTTTCGCAG Nham_0067 79228 - 78251 - | signal peptide peptidase SppA, 36K type TERM 82 78526 - 78569 + g 72 -7.4 -4.19238 | gap 1, opp_overlap 78555 78556 GATCGATCAACTTGA GGTCGACCGCCTGCCGT CCGGTGAAAAC ACGGCCGTCGG-CGACC TTTTCGAGTTGCCCG Nham_0068 80151 - 79411 - | CysZ-like protein TERM 83 80017 - 79998 - G 71 -11.4 -3.53012 | CGGTCTCGGCCCAAA GCTCGCCG GAGC CGGCAAGC CAGCTCAAAAGCCGC TERM 84 80205 - 80189 - R 78 -9.3 -4.03234 | overlap 80190 CTGCGCTCAGATAAA CGCCGCG GCT CGCGCCG GCAAGGGCGCGGATC Nham_0069 80744 - 80250 - | hypothetical protein TERM 85 80293 - 80320 + g 81 -16.4 -2.78384 | gap 1 CCCGCAAGTTCGGCC GCGATCATGGCGC CGA GCGCCATG-TCGC TCTGCTGGCCGAAGC Nham_0070 81676 - 80741 - | hypothetical protein TERM 86 80928 - 80908 - G 70 -7.5 -4.10453 | opp_overlap 80910 80911, overlap 80882 80897 GAAACGGGCCGAAAA CGCCCGC TCCCTCC GCGAGCG GCTTCTGCCTGTCGG TERM 87 81692 - 81708 + H 70 -4.3 -4.64598 | GGCAGTCTCTCTCCG CCGTTCG TCC TGACCGG TTTTTCCCCTCCTTA TERM 88 82225 - 82215 - g 73 -6.8 -4.36914 | overlap 82216 CGCCCGGCCAGAAAA TCCG CAT CGGA CGGCGTAACGCGCGC Nham_0071 81788 - 83302 + | twin-arginine translocation pathway signal TERM 89 83657 - 83671 + G 86 -8.5 -4.64766 | AGAAGCTCGCCGGCA CCGGC ATCGC GCCGG TTTTTCCGCTGTGGG Nham_0072 83299 - 83970 + | protein of unknown function DUF71, ATP-binding region pheT 86664 - 84211 - | phenylalanyl-tRNA synthetase subunit beta TERM 90 84886 - 84864 - G 71 -12.6 -3.09516 | CTGCCGACGAGGCAA CGCCGCGGCG AAT CCCCGCGGCA GCCATGAACTGATCC pheS 87767 - 86661 - | phenylalanyl-tRNA synthetase subunit alpha rplT 88308 - 87949 - | 50S ribosomal protein L20 rpmI 88578 - 88378 - | 50S ribosomal protein L35 TERM 91 88622 - 88605 - R 91 -8.3 -5.14563 | opp_overlap 88606, overlap 88606 GTTGCCACGAAAAAA TGCGCCC CGAG GGGCGCT TTTGCGGCGAAATGC TERM 92 88621 - 88606 - R 81 -11.8 -3.68256 | opp_overlap 88606, overlap 88605 TTGCCACGAAAAAAT GCGCCC CGAG GGGCGC TTTTGCGGCGAAATG TERM 93 88606 - 88621 + r 86 -11.8 -4.07885 | opp_overlap 88606 88605 TTGCCACGAAAAAAT GCGCCC CGAG GGGCGC TTTTGCGGCGAAATG TERM 94 88875 - 88838 - R 100 -22.9 -4.19238 | opp_overlap 88843, overlap 88843 TTTCGAAGTCCAAAA CGAAATCGGCCCGTCAG ATAT CTGACGGGTCGATTTCG GCTCGAACACAAATC TERM 95 88843 - 88870 + r 95 -17.8 -3.59979 | opp_overlap 88838 88843 AAGTCCAAAACGAAA TCGGCCCGTCAG ATAT CTGACGGGTCGA TTTCGGCTCGAACAC TERM 96 88870 - 88843 - R 100 -15.6 -4.21408 | opp_overlap 88843, overlap 88838 AAGTCCAAAACGAAA TCGGCCCGTCAG ATAT CTGACGGGTCGA TTTCGGCTCGAACAC infC 89421 - 88906 - | translation initiation factor IF-3 TERM 97 90044 - 90075 + G 83 -14.4 -3.40403 | gap 1 TGCGCTGGCCAGACG CGAGGCCCCGCGCGC GCC GCTCGCGGG-TCTCG TTCTGATCGCGCCGG Nham_0078 89676 - 90449 + | hypothetical protein Nham_0079 92751 - 90511 - | hypothetical protein TERM 98 92845 - 92805 - R 100 -19.1 -4.18018 | opp_overlap 92803, overlap 92809 92810 GCCTTTTATTCAAAA CGAACGCGCCCGTTCTGAT GGA ATCAGAACGGGCGCTCTGG ACTGTTGAGTGGTAG TERM 99 92841 - 92809 - R 100 -20.7 -3.69605 | opp_overlap 92803, overlap 92805 92810 TTTATTCAAAACGAA CGCGCCCGTTCTGAT GGA ATCAGAACGGGCGCT CTGGACTGTTGAGTG TERM 100 92840 - 92810 - R 100 -24.2 -2.81281 | opp_overlap 92803, overlap 92809 92805 TTATTCAAAACGAAC GCGCCCGTTCTGAT GGA ATCAGAACGGGCGC TCTGGACTGTTGAGT TERM 101 92966 - 92930 - R 78 -6.5 -4.57569 | opp_overlap 92927 92920 92930, overlap 92931 CGATCGCGGGAAAAA GTTGGCGGCTGCTCG ACAGACA CGACCAGTCGCCAAA CTCGTTCTCGGTGTT Nham_0080 94781 - 93054 - | putative PAS/PAC sensor protein TERM 102 94725 - 94743 + g 81 -4.4 -5.10163 | overlap 94726 CTGAGACTTACTGAT CGCTGCGG TTT TCGCGGCA TTTTCTTTTGCGATT TERM 103 94945 - 94935 - H 70 -2.4 -4.73108 | opp_overlap 94940 CTGATAAAATCAAAA GTGC GGG GCTC CGGGGCTCTATGATT TERM 104 95755 - 95728 - g 70 -7.6 -4.09685 | gap 1 CCCGATCCTGGAAAA GGCCGTGCTCGCC GGC GGCG-GCAAGGTC AAGCTGGTCAAGATG TERM 105 95825 - 95840 + G 72 -2.4 -4.81249 | overlap 95827 95836 GCACAGATCGGCAAT CAGTCG ATAC CGGCGG TTTTTGCCTTTACCG Nham_0081 95549 - 96481 + | thioredoxin-related TERM 106 96953 - 96990 + G 73 -7 -4.38712 | gap 2, opp_overlap 96952, overlap 96954 CGCAAGGGCGAAGAC GCCGTC-G-ACCGCGAGC GGCT GCTCGCGGTGCTGACCGA TTTTCTCAAGGTCAA Nham_0082 96539 - 97213 + | peptidase S16, lon-like Nham_0083 97255 - 97452 + | hypothetical protein TERM 107 97517 - 97493 - T 70 -12.1 -2.73364 | TTTTCATGCGAAGCA TGTCCTCGGGC TTG ACCCGAGGACG GATACCGGTTCGCGT Nham_0084 99084 - 97735 - | ammonium transporter Nham_0085 99460 - 99122 - | nitrogen regulatory protein P-II (GlnB, GlnK) Nham_0086 100210 - 99872 - | nitrogen regulatory protein P-II (GlnB, GlnK) Nham_0087 101218 - 100358 - | acyl-CoA thioesterase II TERM 108 102087 - 102069 - g 72 -11.6 -3.35679 | GGTGTGGACCGAGAA GCGGGCGG ACG CCGCGCGC ATCGTCGCGCTCGCG TERM 109 102358 - 102323 - g 71 -11.2 -3.53012 | gap 1 CGGCGCTCGCGGAAA CCGTGGTCGATGCCG TCAGGCT CGGCATCGATC-CGG GGCAAGCCGATGTGC Nham_0088 101377 - 102597 + | 2-octaprenyl-6-methoxyphenyl hydroxylase Nham_0089 102806 - 104077 + | aminotransferase, class I and II Nham_0090 104090 - 106597 + | cell divisionFtsK/SpoIIIE TERM 110 106787 - 106837 + F 74 -11.2 -3.58184 | opp_overlap 106790 106793 106795 106797, overlap 106788 AAAACGCGTCAAATC AAATCATAGAGCCTCGCTTCTGAT TCC ATCAGAAGCGAGGCTCTAGCAACC TTATGATTCTAGTGT TERM 111 106788 - 106836 + F 80 -14.7 -2.74188 | opp_overlap 106790 106793 106795 106797, overlap 106787 AAACGCGTCAAATCA AATCATAGAGCCTCGCTTCTGAT TCC ATCAGAAGCGAGGCTCTAGCAAC CTTATGATTCTAGTG TERM 112 106834 - 106790 - f 100 -21.7 -4.06055 | opp_overlap 106788 106787, overlap 106793 106795 106797 ACGCGTCAAATCAAA TCATAGAGCCTCGCTTCTGAT TCC ATCAGAAGCGAGGCTCTAGCA ACCTTATGATTCTAG TERM 113 106831 - 106793 - f 100 -27.8 -3.0693 | opp_overlap 106788 106787, overlap 106790 106795 106797 CGTCAAATCAAATCA TAGAGCCTCGCTTCTGAT TCC ATCAGAAGCGAGGCTCTA GCAACCTTATGATTC TERM 114 106829 - 106795 - f 100 -26 -3.08586 | opp_overlap 106788 106787, overlap 106793 106790 106797 TCAAATCAAATCATA GAGCCTCGCTTCTGAT TCC ATCAGAAGCGAGGCTC TAGCAACCTTATGAT TERM 115 106827 - 106797 - f 100 -22.8 -3.08901 | opp_overlap 106788 106787, overlap 106795 106793 106790 AAATCAAATCATAGA GCCTCGCTTCTGAT TCC ATCAGAAGCGAGGC TCTAGCAACCTTATG TERM 116 106971 - 106961 - g 74 -4.6 -4.56597 | CTCGCCCGGGAAAAA GCGA TAT CCGC GGCGGCGCAAAGCGC Nham_0091 106840 - 107859 + | outer membrane lipoprotein carrier protein LolA Nham_0092 107936 - 108817 + | exodeoxyribonuclease III (xth) TERM 117 108878 - 108831 - T 82 -14.1 -2.90392 | gap 1, opp_overlap 108829 108827 108831 GACGTTGCAAGCAGA GCGCGCCACGCATCCCTCCCCC TTGCG GGGAGGGAGATGCG-GAAGCGC TGTCTATTTCAGCCA Nham_0093 109336 - 108887 - | cyclic nucleotide-binding domain-containing protein Nham_0094 110107 - 109421 - | two component transcriptional regulator TERM 118 110155 - 110134 - H 71 -11.5 -3.28712 | opp_overlap 110131, overlap 110136 TCCTGGCGGCGAGAA CAGCCGGCG GAAA CGCCGGCCA CACTTCATAAGGTCG TERM 119 110153 - 110136 - H 86 -14.1 -3.21276 | opp_overlap 110131, overlap 110134 CTGGCGGCGAGAACA GCCGGCG GAAA CGCCGGC CACACTTCATAAGGT Nham_0095 110256 - 110897 + | hypothetical protein Nham_0096 111694 - 111017 - | hypothetical protein TERM 120 111268 - 111242 - G 71 -8.1 -3.86346 | gap 2, opp_overlap 111245 GCAGGCCGCGATAAA GGCGTCG-GC-AT CCG ATGGCGCGACGCC GGCTTTCTGCGGTTC TERM 121 111313 - 111323 + g 76 -8.2 -4.18762 | opp_overlap 111308, overlap 111317 111318 TCTGCACGAACAGAT CCGG CCG CCGG TTTTGGCTGGCGATT Nham_0097 112432 - 111728 - | glutathione S-transferase-like TERM 122 112683 - 112672 - g 72 -2.2 -4.72272 | gap 1 CTTCGCGACCAAAAA CGACG ATC CG-CG CGAAAAATACTACGT leuS 112586 - 115222 + | leucyl-tRNA synthetase Nham_0099 115209 - 115793 + | hypothetical protein TERM 123 116702 - 116679 - g 73 -11 -3.5525 | overlap 116669 116667 AGACAGCGGTGGAAA CGGCGCTG CGCAACTT CAGCGCCG CGCGGCTGCTCCAGG holA 115805 - 116833 + | DNA polymerase III subunit delta TERM 124 116940 - 116982 + T 100 -23 -3.16068 | overlap 116940 116942 TCAGCCACATCCTGC TTTAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTATG ATTTTGAATTGACGC TERM 125 116940 - 116983 + T 100 -21.4 -4.27316 | gap 1, overlap 116940 116942 TCAGCCACATCCTGC TT-TAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTATGA TTTTGAATTGACGCG TERM 126 116942 - 116980 + T 100 -27.8 -3.13906 | overlap 116940 116940 AGCCACATCCTGCTT TAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTA TGATTTTGAATTGAC Nham_0101 117328 - 117041 - | excinuclease ABC subunit C Nham_0102 118261 - 117377 - | parB-like partition proteins TERM 127 117493 - 117509 + g 70 -7.9 -4.07568 | TCACCGCGAGGCCGA GCGCATC GCT GACGCGC TTTTCCAGCGCCAGC Nham_0103 119301 - 118441 - | cobyrinic acid a,c-diamide synthase Nham_0104 120080 - 119298 - | methyltransferase GidB Nham_0105 122432 - 120558 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 128 120954 - 120917 - G 81 -10.5 -4.16943 | gap 1, opp_overlap 120937 CCGGATAGGCCAAAA GCTCGAACGCCGACCGCC GAT GGCCGTCG-CGGTTGAGC GACAGGCCATATCTG TERM 129 122417 - 122435 + g 77 -2.4 -5.04385 | CGATTACGATGACGT CGAATGAT GCT GTCATTGG TTTTTTCGCGATATC trmE 123979 - 122606 - | tRNA modification GTPase TrmE Nham_0107 124093 - 126141 + | hypothetical protein TERM 130 126219 - 126186 - T 93 -11 -4.56775 | gap 1, opp_overlap 126188 ATCGGTGGTCAAAAA CGCGTCATGCCCGCG CTCGT CGCGGGCATC-CACG TCTTAAAGTGACACG rho 127599 - 126334 - | transcription termination factor Rho Nham_0109 128942 - 127911 - | transposase IS116/IS110/IS902 TERM 131 128944 - 128954 + H 83 -5.4 -4.93877 | ATAATCTTCTCCATG GGAA CGG TTCC TTTTGTTTCGTGGCG TERM 132 129090 - 129079 - H 75 -5.8 -4.62069 | TCCTGACCGTAAAAA CCTC GAGC GAGG AAGGCGCGGAAAGGC TERM 133 130153 - 130099 - g 76 -9.1 -4.08216 | gap 2 CGATGCTGCCGAAAA GGCGCTGGCGGCGTTCGAGGCCGGCCC CTG GGGCCAGCG-CTACC-CCGCCATCGGC CAGAGCTGGCGGCGC Nham_0110 129221 - 130444 + | transposase, mutator type Nham_0111 131066 - 130647 - | hypothetical protein Nham_0112 131529 - 132371 + | hypothetical protein TERM 134 132901 - 132916 + G 78 -4.6 -4.8143 | overlap 132902 TCCATCTGTTCAGTC GGGTCG AAGG CGACCA TTTTTCCATTCTTGG Nham_0113 132381 - 132989 + | maf protein coaE 133006 - 133605 + | dephospho-CoA kinase TERM 135 134191 - 134163 - g 85 -15.9 -3.53444 | TGATCCTGGCGGAAA CCGCGTCCCGTCG AAC CGGCGGGACGCTG GATATGCCAAGACGT Nham_0115 133628 - 134347 + | DNA polymerase III, epsilon subunit Nham_0116 134926 - 134447 - | preprotein translocase subunit SecB Nham_0117 135379 - 136083 + | import inner membrane translocase, subunit Tim44 Nham_0118 136094 - 137596 + | MltA TERM 136 137774 - 137717 - g 76 -9.1 -4.07687 | gap 2, overlap 137703 AGCCGCTGCGGAAAA CGGCCCGGCTCTGGACGTCGCTGGA AGGGGCTTTG TCCGGCG-CGCCC-GACCCGGCCCG CGAAGCGGCAGCGAA TERM 137 138079 - 138093 + G 73 -11.4 -3.54741 | CAGGTCCCGGAATGG CTCGGG CTT CCCGAG TTTCGCACGCTCGTG Nham_0119 137593 - 138183 + | Smr protein/MutS2 TERM 138 138173 - 138224 + T 76 -3 -4.87803 | gap 1, overlap 138178 138179 ATGTGCGTGTGCGGC GG-CGCCGTTAGAGTCTGTTTCACC TGC GTTGAATCAGACTCTAACCTTATCC TTTTGTTTGAGCATG TERM 139 138178 - 138218 + T 84 -12.7 -3.78096 | overlap 138173 138179 CGTGTGCGGCGGCGC CGTTAGAGTCTGTTTCACC TGC GTTGAATCAGACTCTAACC TTATCCTTTTGTTTG TERM 140 138179 - 138217 + T 86 -16.2 -2.85231 | overlap 138178 138173 GTGTGCGGCGGCGCC GTTAGAGTCTGTTTCACC TGC GTTGAATCAGACTCTAAC CTTATCCTTTTGTTT hslU 139600 - 138299 - | ATP-dependent protease ATP-binding subunit Nham_0121 140237 - 139683 - | ATP-dependent protease peptidase subunit Nham_0122 140506 - 141099 + | imidazoleglycerol-phosphate dehydratase TERM 141 141471 - 141483 + G 70 -10.5 -3.65214 | opp_overlap 141470 141468 141471, overlap 141473 GCGGATGACGAAGAG GCCGC CGA GCGGC GTTTTTTCGATCGCT TERM 142 141473 - 141484 + G 93 -7.2 -5.09895 | opp_overlap 141471 141470 141468, overlap 141471 GGATGACGAAGAGGC CGCC GAGC GGCG TTTTTTCGATCGCTG Nham_0123 141126 - 141641 + | hypothetical protein hisH 141638 - 142288 + | imidazole glycerol phosphate synthase subunit HisH TERM 143 142528 - 142500 - g 100 -12.3 -4.59773 | GCGGATGCTGAAAAA CGTCGCCATGCCG GTA CAGCTTGGCGGCG GCATTCGAGACCTGA Nham_0125 142285 - 143025 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Nham_0126 143041 - 143817 + | imidazole glycerol phosphate synthase subunit HisF TERM 144 144073 - 144102 + G 76 -10.7 -3.79043 | opp_overlap 144066 144064 GAGAATGACCGGCAT CATCTGATCGCCG AGGG CGCCGATCTGATG TTTCACTTCCTCGTG hisE 143899 - 144222 + | phosphoribosyl-ATP pyrophosphatase TERM 145 144269 - 144279 + G 76 -6.8 -4.42788 | opp_overlap 144269 ACAGCAGCAATATAA TCCG TAC CGGA TTTTCTCCCGTTCCG TERM 146 144371 - 144399 + G 86 -8.1 -4.54343 | GCGGTCGATGCATGA TCGCCTCGATCTC ACT GAGGTCGAAGAGA TTTATTTGCCTTTAT TERM 147 144733 - 144759 + G 76 -11.5 -3.75665 | gap 1, opp_overlap 144731 144732 TCAGCGACATCAAGG CGGGCCGCGCGC CGGT GCGCGCG-CCGG TTTACTCGCATCTGA Nham_0128 144237 - 145193 + | pantothenate kinase Nham_0129 147517 - 145259 - | multi-sensor hybrid histidine kinase TERM 148 145463 - 145477 + g 70 -10 -3.59262 | AATTCTCTTGGTGGT CTCGAC GCC GTCGAG TTTAGGCATCTGCAC TERM 149 146181 - 146191 + g 71 -8.2 -3.83205 | overlap 146170 ACCTCGAATGTCGAA CCGG CAC CCGG TTTGCTCTCGAGCGT Nham_0130 148759 - 147863 - | Mg chelatase-related protein TERM 150 148832 - 148806 - H 78 -2.8 -5.09204 | overlap 148808 148810 ATATTGCAACAAAAA CAGACACTTACG AAA CGTAGGCGACAG GCTGCGGGTTGACGA Nham_0131 149040 - 149663 + | hypothetical protein TERM 151 149696 - 149686 - f 83 -5.4 -4.93877 | CGCCACGAAACAAAA GGAA CCG TTCC CATGGAGAAGATTAT Nham_0132 149698 - 150729 + | transposase IS116/IS110/IS902 TERM 152 152061 - 152074 + G 77 -2.3 -5.04868 | opp_overlap 152061 CTTATTGCCATCGAA TCCAG CCAA CGGGA TTTTCTTTGGTTTAC Nham_0133 151606 - 152184 + | hypothetical protein Nham_0134 153112 - 152663 - | hypothetical protein TERM 153 152735 - 152779 + g 81 -13.6 -3.55444 | gap 1, opp_overlap 152742 TGGTCCCAGCGTGTC CGGAACAGGCGCAGCCGTTTC GGGG GCAACGGCTGC-CATGATCCG TTTCCCGGATGCCCG Nham_0135 153447 - 153109 - | hypothetical protein Nham_0136 155741 - 153447 - | hypothetical protein TERM 154 153969 - 153941 - G 78 -6.7 -4.63218 | gap 1, opp_overlap 153946 153947 GGGCTTTCAATAAAA CGGCGTTGACGG CTTCGT CCGTG-ACGCCG CCATGAATTTCCAGT TERM 155 154666 - 154709 + g 71 -6 -4.25104 | gap 1, overlap 154634 154633 154672 154708 CGGAGTCGGGCGACG TCGAGATTTTCGCGCACATGG TTT CGATGCGCGCGAGGG-CTTGA TTTTGATGGGCCAAA TERM 156 154975 - 155018 + g 81 -7.2 -4.41348 | gap 1, opp_overlap 154973 154975 ACGATCCGATCAAGA GC-GCCGATCTCGACGTCGCC GGC GGCGACGACGAACACGCCCGC TTTCTTTCCGGGGCG TERM 157 155095 - 155117 + g 74 -12.7 -3.34715 | opp_overlap 155075, overlap 155076 155094 TTGTCCGCAGCCGTC CAGGCGGCG CGGAC CGCTGCCTG TGTTTCCGGGAGATC Nham_0137 156100 - 155738 - | hypothetical protein TERM 158 156022 - 156072 + g 95 -9.8 -4.40572 | gap 3 GGGCGGCGGCAGCCG CCACGACGGCAGCACGCT-CGTCCG GCGT CAGCCGGAGCGT-C-GTCGTCGTGG TTTTCTGCCGCTTCT Nham_0138 156626 - 156339 - | hypothetical protein Nham_0139 158691 - 156793 - | hypothetical protein TERM 159 157019 - 157038 + g 72 -4.2 -4.58563 | gap 1, overlap 157016 157019 CGTGGAGGGGCTGTG CC-ACCTCC GGA GGTGGTAGG TTGTTTTTCTGGTTC TERM 160 157100 - 157115 + g 72 -11.8 -3.29829 | opp_overlap 157100, overlap 157100 CTCGGTACGGGTAAA CCCCCC TTCG GGGGGG TTATACCACCATATA TERM 161 157114 - 157100 - G 77 -12.8 -3.57144 | opp_overlap 157100 157100 CTCGGTACGGGTAAA CCCCCC TTC GGGGGG GTTATACCACCATAT TERM 162 157434 - 157416 - G 76 -5.9 -4.63218 | opp_overlap 157427, overlap 157417 CCGGGCTCAACAAAA CGCGCAA GCCGG CCGCGCG CATCTCGGCTTCCTC TERM 163 158727 - 158752 + r 83 -5.4 -4.91109 | CCCCGGCGAGCGGCT GATGACCGCG AAGACC CGGGGTTATC TTTTTATGGTCAGAG TERM 164 158796 - 158771 - R 75 -11.8 -3.26471 | opp_overlap 158789 TTATGGTCAGAGCAA TCGGCGCGCG GCGCAA CGCGCGACGA GACGTCCGTAGTCTC Nham_0140 160173 - 158977 - | hypothetical protein Nham_0141 160771 - 160184 - | hypothetical protein TERM 165 160661 - 160650 - G 77 -2.2 -4.99435 | GTGAAGAAGGAAAAA CCCA TCGA TAGG GTACCAGTTCTGGGC Nham_0142 161731 - 160829 - | hypothetical protein Nham_0143 163591 - 161894 - | recombinase TERM 166 162336 - 162354 + g 79 -13.8 -3.53012 | overlap 162334 GTCTGGAAACGCTCG GCGGCGGC ATC GTCGCCGC TTTCAACGAGGACGA TERM 167 162869 - 162887 + g 77 -3.8 -4.86293 | opp_overlap 162856 AAGACGTCGCAGGCT TGACGTCT GCC AGCCGTTA TTTTGCTTTTTCTTC TERM 168 163314 - 163282 - G 71 -6.2 -4.37711 | gap 1, overlap 163300 163303 GGATCAAATCGAAAA GCCGTGAGGCAG-CA TCAA TGACCGCTTCGCGGC TCAATCGATCCAGCG Nham_0144 164275 - 163628 - | Mg chelatase-related protein Nham_0145 165316 - 164375 - | glutathione synthetase TERM 169 164546 - 164519 - G 70 -7.7 -4.07133 | gap 1, overlap 164522 GATGCCGACAAACAA CAGCCC-GCGCT CGCGC AGCGCCGGACCG ATGCGCTCACAAATC TERM 170 165127 - 165167 + g 84 -17 -2.70932 | opp_overlap 165120, overlap 165149 TAAAATGATCGCCGT CCTGATCGCGCACGG-TCAG CGA CTGAGCCG-GCGCGACCAGG TCCTTGCCGCGCAGG Nham_0146 165773 - 165366 - | hypothetical protein Nham_0147 166714 - 165770 - | hypothetical protein TERM 171 166290 - 166235 - G 91 -6.6 -5.27335 | gap 1, overlap 166237 TCCCTCAAAGAAAAA CCGGTCCGTCGGCAGCGC-GGCCAC CGCGAGC GCGGCCAGCACGGACGATGGCCCCG GCAGCGCGATCACCT Nham_0148 167003 - 168214 + | extracellular ligand-binding receptor Nham_0149 169390 - 168230 - | coproporphyrinogen III oxidase Nham_0150 170012 - 169377 - | putative deoxyribonucleotide triphosphate pyrophosphatase rph 170874 - 170161 - | ribonuclease PH hrcA 171055 - 172143 + | heat-inducible transcription repressor TERM 172 172680 - 172668 - g 70 -7.7 -4.07568 | TCCGGCCGGCGAAAA GTTCG ATC CGAAC GTCCATCAGGCAATG Nham_0153 172225 - 172836 + | GrpE protein Nham_0154 173939 - 173001 - | hypothetical protein TERM 173 173079 - 173048 - G 86 -8.6 -4.60924 | gap 1 GAAAGCGCGGAAAAA CGGCAGACCACC-CG TCC CGCGGCGTACTGCCG ATCAGCCGCATTGCC TERM 174 174863 - 174847 - g 73 -8.7 -4.09685 | TCCCACGGTCGAAAA GGACAAG CAC CTCGTCC CTTACAAGATCGCGA TERM 175 175084 - 175061 - g 74 -10.2 -3.74693 | overlap 175064 CGTCAGGCCACCAAA GACGCCGGCA AGAT CGCCGGCCTC GAAGTGCTGCGCATC Nham_0155 174596 - 176494 + | molecular chaperone DnaK Nham_0156 176650 - 177783 + | chaperone DnaJ Nham_0157 177877 - 178479 + | ribosomal RNA adenine methylase transferase Nham_0158 178829 - 179698 + | dihydrodipicolinate reductase Nham_0159 179740 - 180363 + | phosphoglyceromutase Nham_0160 181443 - 180499 - | AraC family transcriptional regulator TERM 176 181014 - 181024 + g 88 -8.2 -4.74103 | opp_overlap 181001, overlap 181012 AAGCCAGCCTCATGC CGGC GCC GCCG TTTTTCCATTCGCCG TERM 177 181320 - 181301 - G 76 -6.4 -4.52589 | gap 1 TTTGCCGAGATAAAA GCGATCGCG CGC CGC-ACCGC ATCGTAGTCGCGCAG TERM 178 181579 - 181565 - R 80 -10 -4.08394 | opp_overlap 181564 181563 181577 ATACTTCCTCGAAAA CGCTCT AAG AGAGCG GATTGTAGGTCGGCC Nham_0161 182093 - 181569 - | hypothetical protein TERM 179 181677 - 181666 - G 80 -5.8 -4.71426 | overlap 181668 TCCGGACCAAGAAAA CTCG CGAT CGAG ATCCGGCGGCCGCGC TERM 180 181863 - 181835 - G 79 -8.2 -4.25283 | gap 1, opp_overlap 181835 AGTGGGTGATGAAAA TTTCCTCCGTGGC TCTG GCC-CGCAGGAAA TTGATCCGGAACGCC TERM 181 182711 - 182677 - g 95 -11.5 -4.56597 | gap 1, overlap 182679 GCGCTGTCGGAAAAA CTGCTCGCGGACTTCA ATGG CGAAGTCC-CGCGCAG CCGCGCCGGGATCGA Nham_0162 182236 - 183024 + | endonuclease III TERM 182 183030 - 183017 - T 74 -2.3 -5.00616 | GCTGGCCGGAAAAAA CGATC TAAA GCTCG GTCGTTCATCCATCT TERM 183 183184 - 183163 - T 100 -15.9 -5.45802 | opp_overlap 183163 CCTGCAAAACAAAAA GGCTCCGGT CGAA ACCGGAGCC TTTGGTCGGCTGCAA TERM 184 183163 - 183184 + T 100 -15.9 -3.74693 | opp_overlap 183163 CCTGCAAAACAAAAA GGCTCCGGT CGAA ACCGGAGCC TTTGGTCGGCTGCAA rpsA 184915 - 183215 - | 30S ribosomal protein S1 TERM 185 185163 - 185139 - R 80 -14.3 -2.70932 | GCGTTCCTCCAATGA CGGCGGGAGTT TGA AACTCCGGCCG GCCCGCTCGGGCGGT Nham_0164 185952 - 185323 - | cytidylate kinase Nham_0165 187298 - 185949 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 186 186573 - 186534 - G 70 -9.9 -3.62096 | gap 1 GGCGACGATCGGAAA CGCCGCCGATGACGGGTC GGCCG GTACCGTGA-CGGCGGCG CCGTGCAGTTCGGGC Nham_0166 187444 - 187857 + | hypothetical protein TERM 187 187862 - 187885 + F 81 -13.2 -3.53012 | AGGAGACTTGAGATC GGCCCTGAAC TGTG GTTCAGGGTC TTTGAGACCGCGCCG TERM 188 188316 - 188374 + F 71 -8.1 -3.94846 | opp_overlap 188300, overlap 188316 CCGCCGAAGTGTGGG -CGGTTCGGCGACCGGATCATGCGCCA TTCAAGT TGGCGCGCGA-CCGGACGCAAAACCGG TTTCACTTTTGCTGG TERM 189 188316 - 188373 + F 82 -14.1 -2.96184 | gap 1, opp_overlap 188300, overlap 188316 CCGCCGAAGTGTGGG CGGTTCGGCGACCGGATCATGCGCCA TTCAAGT TGGCGCGCGA-CCGGACGCAAAACCG GTTTCACTTTTGCTG TERM 190 188792 - 188779 - g 72 -3.7 -4.62069 | CGCGGACTTGAAAAA CGGGC TACT GTCCG TCGATCTGGCCAGGC Nham_0167 188426 - 188857 + | heat shock protein Hsp20 Nham_0168 188963 - 189229 + | hypothetical protein TERM 191 189259 - 189234 - f 88 -16.9 -2.91264 | gap 1 GCGTGCATTGAGAGA CGCGCGA-GGCG CGC CGCCGTCGCGCG CGACCGAGTTAGCGG TERM 192 189273 - 189307 + F 100 -20.1 -3.34398 | opp_overlap 189278, overlap 189278 CGCGACCGAGTTAGC GGAAAGCGGCGGCGC GTTGA GCGCTGCCGCTTTTC TGTTTGACGGCCCGG TERM 193 189302 - 189278 - f 88 -14.2 -3.61178 | opp_overlap 189273 189278 CCGAGTTAGCGGAAA GCGGCGGCGC GTTGA GCGCTGCCGC TTTTCTGTTTGACGG TERM 194 189278 - 189302 + F 100 -16.4 -4.78848 | opp_overlap 189278, overlap 189273 CCGAGTTAGCGGAAA GCGGCGGCGC GTTGA GCGCTGCCGC TTTTCTGTTTGACGG TERM 195 190619 - 190606 - g 75 -3.1 -4.94992 | gap 1 TCAAACGGACAAAAA GCG-AC AGC GTGCGC AGTTTCTATCTGGCC Nham_0169 189495 - 191336 + | dihydroxy-acid dehydratase TERM 196 191453 - 191501 + T 90 -4.7 -5.41746 | gap 3, overlap 191452 191454 191500 CAAATTCTCCTCGTG C-TACTG-GATTCCCGACAGCCGC TAAC GCGGCT-TCGGGAATGACGGAACG TTTTTTTAGAGCGTT Nham_0170 192119 - 191721 - | hypothetical protein TERM 197 192233 - 192205 - R 76 -12.5 -3.11604 | overlap 192203 192201 GATCAAAATCATAGA GCCCGCTTCTGAT TCG ATCAGAAGCGGAA AGGCTCTAGAACGAT TERM 198 192357 - 192409 + r 100 -12.1 -4.41494 | opp_overlap 192357 192360, overlap 192360 GTTCCGTCAAAATAA GAATCGCTCTAGAGTCAGATTCAAC TGA GTTTAATCAGACTCTAGCCCGATCC TTTTGATTGAGCATG TERM 199 192409 - 192357 - R 100 -14.3 -4.17048 | opp_overlap 192357 192360, overlap 192360 GTTCCGTCAAAATAA GAATCGCTCTAGAGTCAGATTCAAC TGA GTTTAATCAGACTCTAGCCCGATCC TTTTGATTGAGCATG TERM 200 192360 - 192406 + r 75 -12.4 -3.18268 | opp_overlap 192357 192360, overlap 192357 CCGTCAAAATAAGAA TCGCTCTAGAGTCAGATTCAAC TGA GTTTAATCAGACTCTAGCCCGA TCCTTTTGATTGAGC TERM 201 192406 - 192360 - R 90 -12.4 -4.20868 | opp_overlap 192360 192357, overlap 192357 CCGTCAAAATAAGAA TCGCTCTAGAGTCAGATTCAAC TGA GTTTAATCAGACTCTAGCCCGA TCCTTTTGATTGAGC Nham_0171 192945 - 192484 - | PTS IIA-like nitrogen-regulatory protein PtsN Nham_0172 193792 - 193196 - | sigma 54 modulation protein/ribosomal protein S30EA Nham_0173 195489 - 193849 - | RNA polymerase factor sigma-54 TERM 202 195297 - 195254 - G 85 -15.2 -3.53012 | gap 1, opp_overlap 195254 195257, overlap 195280 195281 TCGTCGTCCCCGAAA GCCGC-CGCGTCGCCGCCTTC TGA AAATTCGGCGTCGCGAGCGGC GGGCTCCCCAGCCGC Nham_0174 196104 - 195721 - | hypothetical protein TERM 203 195756 - 195797 + g 85 -15.2 -3.52918 | gap 2, overlap 195752 GAGGCATCGGCGTGG GATCGACCG-CGC-GCGGCG CAGC CGCCGCAGCGGCTGTCGGTC TTGGTTTCGGGCTTG TERM 204 195978 - 195926 - G 80 -14.7 -3.14931 | CGCAGGCCCCACGAA TGCGCGATCGACGGCCCGGCGGT ATAGCCG ACCACCGCGCCGGCGACCGCCCC GACCGGACCCAGGAC Nham_0175 196228 - 196590 + | hypothetical protein Nham_0176 197683 - 196682 - | ABC transporter related TERM 205 197631 - 197641 + g 74 -4.6 -4.57341 | opp_overlap 197628 GTCCGCGCAAAGGCT TGCG GCC CGCG TTTTTGCGGCCGCTT Nham_0177 198590 - 197904 - | OstA-like protein TERM 206 198212 - 198242 + g 70 -13.2 -2.91144 | overlap 198211 198227 TGATCGAGGATGCGC CCGATGGTCCCGGC GTC GCCGAGGCCATCGC TGGTTTCGACGGTGA TERM 207 198315 - 198348 + g 76 -13.2 -3.53224 | opp_overlap 198299 CACGAGAGTCTTCGA CGTCATGGTGGTGT CGCCCT GCACCACCTTGACG TTTCCGGAGAACGTC Nham_0178 199363 - 198587 - | hypothetical protein Nham_0179 200234 - 199614 - | 3'-5' exonuclease TERM 208 200625 - 200610 - g 95 -10.4 -4.63932 | overlap 200620 GACTCTTCAAGAAAA TCGCCC AAAT GGGCGA CGCGCCGGTCCGGCT Nham_0180 200513 - 201277 + | hypothetical protein TERM 209 201457 - 201477 + T 81 -12.6 -3.54741 | ATGGCCGGGACGTCT GCGCGAAG ACAGG CTTCGCGC TTTCGCCCGATCGTG Nham_0181 202158 - 201529 - | hypothetical protein TERM 210 201757 - 201723 - G 86 -15.6 -3.5394 | overlap 201724 AAAGTTGTTTCGAAA CGCTGGCGCGGTGGTG GTG CGCTACCGCGCCAGCC AAAAGAGCGCCAAGT TERM 211 201756 - 201724 - G 87 -19.1 -2.72043 | overlap 201723 AAGTTGTTTCGAAAC GCTGGCGCGGTGGTG GTG CGCTACCGCGCCAGC CAAAAGAGCGCCAAG Nham_0182 202247 - 202450 + | hypothetical protein TERM 212 202901 - 202880 - f 80 -9.5 -4.14013 | gap 1, opp_overlap 202885, overlap 202871 202885 GAAAACGCGTCAAAA CACAAGCCGG AGC CCGGCTT-TG ATTCCATCAAGCGGG TERM 213 202897 - 202885 - f 80 -10.5 -3.95435 | opp_overlap 202885, overlap 202880 CGCGTCAAAACACAA GCCGG AGC CCGGC TTTGATTCCATCAAG TERM 214 202885 - 202897 + F 77 -10.5 -3.93288 | opp_overlap 202885 202880 CGCGTCAAAACACAA GCCGG AGC CCGGC TTTGATTCCATCAAG Nham_0183 203006 - 203974 + | NAD-dependent epimerase/dehydratase Nham_0184 204824 - 204018 - | undecaprenyl pyrophosphate phosphatase TERM 215 204924 - 204971 + H 74 -7.8 -4.16842 | gap 1, opp_overlap 204925 204967, overlap 204927 GTCGGATCGGCAATC ATGGCTCCAATCCGTTGACGGCC TGC GGC-GTTAACGGATTAGAGATAC TTTCTTAAGCATCGC TERM 216 204927 - 204968 + H 73 -11.7 -3.10512 | gap 1, opp_overlap 204925 204967, overlap 204924 GGATCGGCAATCATG GCTCCAATCCGTTGACGGCC TGC GGC-GTTAACGGATTAGAGA TACTTTCTTAAGCAT Nham_0185 205005 - 205697 + | glutathione S-transferase-like Nham_0186 206833 - 205913 - | 2-dehydropantoate 2-reductase Nham_0187 208279 - 206930 - | MATE efflux family protein TERM 217 207713 - 207662 - G 100 -23 -3.37354 | CACACCGAGCCACAA CAGCGTCACGACCGCCGAGATCGC GGAC GCGATCGCGGCGCTGGCGACGCCG AACTGGGGCAGTCCG TERM 218 208155 - 208132 - G 77 -3.8 -4.88918 | opp_overlap 208137, overlap 208133 208136 TCATCGGAAAGAAAA TCGAGGCG GCGGCGAG CGCATCGA CGCCGATCATCTGGC TERM 219 208318 - 208334 + r 75 -10.1 -3.74693 | opp_overlap 208318 GAGACACCGCCGAAA GCCGGAG CTA TTCCGGC TTTGATGGAATCAAA Nham_0188 209083 - 208502 - | hypothetical protein Nham_0189 209445 - 210620 + | hypothetical protein Nham_0190 211865 - 210726 - | hypothetical protein Nham_0191 213800 - 212055 - | gamma-glutamyltransferase TERM 220 214366 - 214384 + G 81 -11.7 -3.85698 | TGCCGTCGCTGGTGC CGCCCGA CAAGA TCGGGCG TTTGTCGGGGACCGG Nham_0192 213912 - 215321 + | major facilitator transporter Nham_0193 216328 - 215345 - | cytochrome c, class I Nham_0194 216987 - 216325 - | cytochrome c, class I purH 218820 - 217228 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 221 218379 - 218395 + g 72 -4.3 -4.56597 | overlap 218371 GCGCTTCGACCACGA CCGCGAC GTC GTCATGG TTTTTCGCGGCGGCG Nham_0196 220676 - 218922 - | heparinase II/III-like Nham_0197 222166 - 220814 - | Fmu (Sun) TERM 222 221449 - 221431 - G 75 -13.8 -3.03771 | opp_overlap 221446 GGAGATCGCCGAACA GCCGCGCC GGC AGCGCGGC GGCGGCGTCCTGCAC TERM 223 221895 - 221881 - G 95 -12.8 -4.2558 | CAGCCCCGATCAAAA GCGCGC TCT GCGCGC GCGGCGCATCGGTCG Nham_0198 222371 - 222589 + | hypothetical protein TERM 224 223384 - 223366 - T 100 -11.6 -5.24531 | opp_overlap 223366, overlap 223368 ACCTCGCACAAAAAA GGCGCGCG AAC CGCGCGGC TTTCGGCATTGTCTG TERM 225 223366 - 223384 + T 74 -11.6 -3.63305 | opp_overlap 223366 223368 ACCTCGCACAAAAAA GGCGCGCG AAC CGCGCGGC TTTCGGCATTGTCTG TERM 226 223382 - 223368 - T 73 -12.8 -2.83915 | opp_overlap 223366, overlap 223366 CTCGCACAAAAAAGG CGCGCG AAC CGCGCG GCTTTCGGCATTGTC Nham_0200 223928 - 223410 - | ErfK/YbiS/YcfS/YnhG lysK 225778 - 224147 - | lysyl-tRNA synthetase Nham_0202 226823 - 225903 - | extracellular solute-binding protein TERM 227 225938 - 225953 + g 72 -3.9 -4.56597 | AATACCGCAACCACA GGTCG GTATAG CGGCC TTTTTCCCAGACCCG Nham_0203 226878 - 228275 + | glycosyl transferase family protein Nham_0204 228332 - 228793 + | hypothetical protein TERM 228 229337 - 229363 + G 71 -5.1 -4.4767 | gap 1, opp_overlap 229331 229328, overlap 229343 GATAATGAACTGGCG TCGC-CCGCTCT GCGG GGAGCGGAGCTA TTTTATCATAACTCC TERM 229 229343 - 229361 + G 71 -8.1 -3.84585 | opp_overlap 229328, overlap 229337 GAACTGGCGTCGCCC GCTCTGC GGGGA GCGGAGC TATTTTATCATAACT Nham_0205 229256 - 229846 + | hypothetical protein Nham_0206 230832 - 229843 - | putative transposase TERM 230 231132 - 231105 - g 73 -6.9 -4.30576 | overlap 231106 TGTTGATGACGAAAA GGAGCGCGGGA TAAAGG CCCCACGCTCG ACATGAATCTCTGAT Nham_0207 230911 - 231138 + | XRE family transcriptional regulator TERM 231 231275 - 231244 - T 71 -11.6 -3.28712 | CGGCCCGTCTCAGAA GCTACCAGTCACGC GCCA ACGCGACCGATAGC CTCTGACGGTACTGA TERM 232 231365 - 231384 + T 100 -15 -4.54727 | opp_overlap 231364 231361 TTGGTTAGAGATCAG CCGGACCC TTGC GGGTCCGG TTTTCGTTTAAACGG Nham_0208 231999 - 231400 - | hypothetical protein TERM 233 232018 - 232036 + H 73 -11.8 -3.10464 | opp_overlap 232009 232006, overlap 232010 CAACACCGTTGATTG TGTTGCGA ATT TCGCAACA TGTTCAAGTTGATGC TERM 234 232120 - 232102 - H 76 -7.3 -4.53034 | overlap 232103 TTCACAGAATCAAAA TGGCCGC GCGTT GCGGCCT GTGGGGTGGCTAATA TERM 235 232572 - 232615 + G 81 -16.2 -2.79183 | ATAACGCCGCTGCAC CTGACCACGATCGTCG CCGGTTTCGTCT CGACGATCGTGGTCGG TCTGATGGGCCTGGC Nham_0209 232194 - 232853 + | putative glycosyl transferase Nham_0210 233437 - 232844 - | electron transport protein SCO1/SenC Nham_0211 233677 - 233504 - | hypothetical protein Nham_0212 234294 - 233839 - | hypothetical protein TERM 236 234660 - 234648 - g 74 -10.5 -3.72576 | GCGCGCGTGACGAAA GCGCG ATC CGCGC CATCATGCAGGCGAA Nham_0213 234563 - 235255 + | RNA polymerase sigma factor Nham_0214 235351 - 235875 + | hypothetical protein Nham_0215 235886 - 236227 + | putative amicyanin precursor protein TERM 237 236218 - 236231 + T 72 -9.5 -3.73107 | opp_overlap 236218 236217 GGCTAGGCTGACAAT CGCGC CGTA GCGCG TTTCAGGTTTGATAC Nham_0216 236825 - 236253 - | hypothetical protein Nham_0217 237439 - 237035 - | crcB protein TERM 238 237689 - 237658 - R 73 -11.6 -3.45027 | gap 1, overlap 237656 237659 ACGGGGGAGGAAACA GCTCCTACCGA-CGC GAA GCGCCCGGTAGGAGT CATCAGCCTTGCGGC TERM 239 237688 - 237659 - R 81 -15.1 -2.66695 | gap 1, overlap 237658 237656 CGGGGGAGGAAACAG CTCCTACCGA-CGC GAA GCGCCCGGTAGGAG TCATCAGCCTTGCGG TERM 240 237854 - 237805 - R 100 -12.3 -4.86621 | gap 1, overlap 237810 237842 ATGCTCAATCAAAAA GATGAGGCAAGGGTCTGATTCAAC GAC ATTG-ATCAGACCCTGGCCGGATC GGCGAACCGGTCAAG TERM 241 237849 - 237810 - R 85 -15.2 -3.05624 | gap 1, overlap 237805 237842 CAATCAAAAAGATGA GGCAAGGGTCTGATTCAAC GAC ATTG-ATCAGACCCTGGCC GGATCGGCGAACCGG Nham_0218 239172 - 238066 - | 2'-deoxycytidine 5'-triphosphate deaminase TERM 242 239392 - 239428 + H 93 -11.5 -4.56775 | opp_overlap 239396, overlap 239396 239417 CGTTAAATAAGTTGC TAAACAGGCCGGGGACA ATG TGATCCCGGCCTGTGGA TTTTTCCAGGCCGGT TERM 243 239396 - 239424 + H 87 -16.7 -2.83903 | opp_overlap 239396, overlap 239392 239417 AAATAAGTTGCTAAA CAGGCCGGGGACA ATG TGATCCCGGCCTG TGGATTTTTCCAGGC TERM 244 239424 - 239396 - H 88 -14.5 -3.59649 | opp_overlap 239396 239392 239417 AAATAAGTTGCTAAA CAGGCCGGGGACA ATG TGATCCCGGCCTG TGGATTTTTCCAGGC TERM 245 239417 - 239442 + G 100 -11.9 -5.61596 | gap 1, opp_overlap 239396, overlap 239396 239392 GGGGACAATGTGATC CCGGCCTGTGGA TTT TTC-CAGGCCGG TTTTTTTGTGACCGT Nham_0219 239411 - 240679 + | O-succinylhomoserine sulfhydrylase Nham_0220 241766 - 240783 - | lipolytic enzyme, G-D-S-L TERM 246 241149 - 241185 + g 76 -13.8 -3.14564 | gap 1 GGCTTCGACGGTTTT CGCGGTGCTCGCGGGAT CGAG ATTGCGC-AGCACCGCG TTGGTGCCGACCTGC Nham_0221 242527 - 241766 - | hypothetical protein Nham_0222 243759 - 242524 - | acyltransferase 3 TERM 247 242686 - 242670 - G 73 -11.5 -3.58162 | overlap 242666 TGATGACGAAATGAA GCCCGGC GCC GCCGGAC GCCTCGGCCAGAATG TERM 248 242790 - 242742 - G 71 -5.3 -4.42386 | gap 2, overlap 242743 CGCCGATGCAGAAAA TCTCCAGTGAGTGCTGGCCGC ACAGGACCA GCGGCC-GCAGCCAC-GGCGA GGTCAGCCCGGGCCA TERM 249 243739 - 243693 - G 78 -12.2 -3.75153 | overlap 243694 GCGCCGGAATCGAAA CGTCATTGCTCGCGCCATCG GCAGCCG CGCTGGCGCGGGCACCGACA ACCTGATTGGCAACA TERM 250 243738 - 243694 - G 74 -13.5 -2.84878 | overlap 243693 CGCCGGAATCGAAAC GTCATTGCTCGCGCCATCG GCAGCCG CGCTGGCGCGGGCACCGAC AACCTGATTGGCAAC apaG 243972 - 244490 + | ApaG hslO 245532 - 244525 - | Hsp33-like chaperonin Nham_0225 246157 - 245648 - | OsmC-like protein TERM 251 246242 - 246271 + H 100 -15.7 -3.6471 | gap 1 GCGCACCCAGTACCG CCAC-CGCGCCGCA GAC TGCGGCGCGAGCGG TTGTGTGCTTTCGGC Nham_0226 246434 - 249229 + | PII uridylyl-transferase TERM 252 249707 - 249695 - g 80 -6.2 -4.67552 | opp_overlap 249701 GGGACGAAAAAAGAA GCGC GGCGG GCGC AAGGAGCCGGTATTC TERM 253 250071 - 250038 - g 76 -8.2 -4.24002 | gap 2, overlap 250057 CTGGAAATTCCAAAA CG-CC-CGCCGACCAT CAAG ATCGTCGGCGCGGACG GCAGCGTGCTGGCGA Nham_0227 249672 - 251870 + | penicillin-binding protein 1A Nham_0228 252864 - 252028 - | hypothetical protein TERM 254 252867 - 252857 - G 72 -4 -4.56597 | CGCTCGGCGCAAAAA CAAA TCA TTTG CCCAATATACAGGGG Nham_0229 254401 - 253067 - | polyhydroxyalkanoate depolymerase, intracellular TERM 255 254502 - 254535 + H 73 -12.5 -2.79671 | gap 1, overlap 254501 254504 AACGGGTTACGCGAA CC-GGATGTGGCGGAA ATA TTCCGCCATACCCTGG CTTTCGCGTTGACCT TERM 256 254504 - 254532 + H 74 -13.9 -2.66326 | overlap 254502 254501 CGGGTTACGCGAACC GGATGTGGCGGAA ATA TTCCGCCATACCC TGGCTTTCGCGTTGA TERM 257 254547 - 254589 + H 100 -13.4 -5.07652 | opp_overlap 254576, overlap 254548 254549 CTGGCTTTCGCGTTG ACCTGGAGTCCGGCTCGGAT GGA ATCAAAGCCGGACTCCAGCC TTTTGTTTTGACGCG TERM 258 254548 - 254588 + H 100 -16.9 -3.63868 | opp_overlap 254576, overlap 254547 254549 TGGCTTTCGCGTTGA CCTGGAGTCCGGCTCGGAT GGA ATCAAAGCCGGACTCCAGC CTTTTGTTTTGACGC TERM 259 254549 - 254587 + H 100 -20.4 -2.77598 | opp_overlap 254576, overlap 254548 254547 GGCTTTCGCGTTGAC CTGGAGTCCGGCTCGGAT GGA ATCAAAGCCGGACTCCAG CCTTTTGTTTTGACG TERM 260 254686 - 254731 + H 100 -18.5 -4.07885 | gap 1 GTGGCTCGCCCTCCG CGCGGCTAGAGTCCGATCCAAC TTC GTTGAATCGGACTCTAGA-GCG TTTTCGAGCGAAGTG TERM 261 254841 - 254894 + H 95 -17.7 -3.55444 | gap 1 CTAGCCCATCCTTTT GATT-GAGCATGATCCCGAAAATCGG TTC CCACTTTTCGGGATCATGCTCTAAGC TTTGGACAATGACCG Nham_0230 254849 - 256243 + | periplasmic sensor signal transduction histidine kinase TERM 262 256256 - 256221 - f 78 -6.1 -4.70879 | overlap 256223 TCGAAACCTCAAAAA CAGTCGCGGAGAC AATGGTTTAG GTATCCGCGACGG CGATCGTGAGTCTCA Nham_0231 256335 - 256889 + | response regulator receiver domain-containing protein Nham_0232 257409 - 256918 - | hypothetical protein TERM 263 257979 - 257998 + G 100 -4.2 -5.40072 | gap 1, overlap 257968 CCTTCATTGCCCCGG CCACTC-GC CGG GCAGCGTGG TTTTTTTCAACAGGG TERM 264 258134 - 258146 + G 74 -9.1 -3.83026 | opp_overlap 258107 258110, overlap 258132 AGCTGCTGCCGCTCG GCGAC GAC GTCGC TTTCATCTGCGGACA Nham_0233 257533 - 258225 + | beta-lactamase-like TERM 265 258247 - 258270 + T 72 -6 -4.32402 | gap 1, opp_overlap 258247, overlap 258244 ACCTCTGAATGGAAA GAGGCC-TCCT TTA ACGACGGCCTC TTCTTTTGCTTCGCA Nham_0234 258711 - 258295 - | hypothetical protein Nham_0235 261698 - 258873 - | PAS/PAC sensor hybrid histidine kinase Nham_0236 262962 - 261958 - | OmpA/MotB Nham_0237 264071 - 263148 - | heat shock protein HtpX Nham_0238 264736 - 264185 - | GCN5-related N-acetyltransferase TERM 266 264794 - 264773 - R 100 -18.7 -5.48213 | opp_overlap 264773 TACGCAAAAGAAAAA GCCCCGGCC GAAA GGCCGGGGC TTTGAAGTCCGACGC TERM 267 264773 - 264794 + r 100 -18.7 -3.59979 | opp_overlap 264773 TACGCAAAAGAAAAA GCCCCGGCC GAAA GGCCGGGGC TTTGAAGTCCGACGC Nham_0239 266176 - 264818 - | putative outer membrane protein TERM 268 266625 - 266677 + G 100 -13.5 -4.40298 | gap 2, opp_overlap 266645 GGCGCTGCTGATTGC GC-CCACCGGCGCCGGCA-AGACGC TGGCC GGGTTTCTGCCGACGCTGGTGGAGC TTTCTTGCTTTCCCT TERM 269 266850 - 266892 + G 83 -15.7 -3.14211 | overlap 266837 CACCGGCGATACGCC GATGTTACGGCGG-CAGCGCC AGC GGCGCTATCCGCCG-GACATC TTGCTGACGACGCCT TERM 270 266934 - 266946 + G 100 -4.7 -5.50723 | GCTGCTGCTCGCCTC CGACG ATG CGCCG TTTTTGTTTTCGTCG TERM 271 267726 - 267747 + G 84 -13.7 -3.73775 | gap 1 GGCCCAGCACGTGCT CGGCTGCGCC TGC GGCGC-GCCG TTTCATGCCGATCAA TERM 272 268737 - 268747 + G 72 -2.4 -4.77165 | opp_overlap 268736 TTCTGATGAGAAGAC CCGG CGG CAGG TTTTGTTCTCCACCG Nham_0240 266479 - 269040 + | DEAD/DEAH box helicase-like Nham_0241 269081 - 269776 + | metallophosphoesterase Nham_0242 270640 - 269777 - | LysR family transcriptional regulator TERM 273 269991 - 269964 - G 75 -12 -3.63305 | gap 1, overlap 269965 GAGAGAATGCTTAAA CCCAGACCGGCGG CGA CCG-CGGCCTGGA TGCCTGCGAGGCTCG TERM 274 271103 - 271124 + G 72 -7.9 -4.15222 | overlap 271105 CGCCAACCCGGTATT CACCGCGGT GCTG GCCGCGGTC TTTCTTGGCGAGAGT TERM 275 271105 - 271122 + G 70 -10.5 -3.6761 | overlap 271103 CCAACCCGGTATTCA CCGCGGT GCTG GCCGCGG TCTTTCTTGGCGAGA Nham_0243 270738 - 271676 + | hypothetical protein Nham_0244 272531 - 271734 - | hypothetical protein TERM 276 272482 - 272440 - G 74 -14 -2.84812 | overlap 272469 ACCGAGACGATCAGA TGCTCGGCGCGCGCATCGCC CGC GACGAAGGTCGAGCCGAGCA GCAGCACCAGCATCA Nham_0245 273454 - 272528 - | hypothetical protein TERM 277 273357 - 273325 - G 76 -13.4 -3.16492 | overlap 273323 CGATACCGACGAAGA TCAGCAGCGGCGTC ATCAG GAAGCCGCCGCCGA TGCCGAACATGCCGG TERM 278 273516 - 273538 + r 73 -12.6 -2.80816 | GCATGGACCGTCAGT CGCGGCGCGG TCG CTGGGCCGCG TCTCCTGCATAACCG Nham_0246 274588 - 273863 - | transposase, IS4 Nham_0247 274973 - 274623 - | ISGsu3, transposase Nham_0248 278316 - 275056 - | Sel1-like TERM 279 275722 - 275710 - G 70 -10.5 -3.60296 | GACGCCGACTTCAAA CGCCG CCG CGGCG TCGCCGTGGAGCGCG TERM 280 277807 - 277760 - G 83 -7.4 -4.58395 | opp_overlap 277737 277762, overlap 277737 277762 TCGAGGCCGGAAAAA TCCGGCGCCGGCCGCGACGTTG TCAT CGCCGGCACGACCGGCGGTGAA CTGCGCGGCGGCATC Nham_0249 278750 - 279238 + | MarR family transcriptional regulator TERM 281 279567 - 279536 - g 76 -13.8 -3.16564 | gap 1 GCTCGAGGGCATGAA GCTCC-TGCTCGGCT GGG AGCCGATCATGGAGC AGGGCAATATCATCG Nham_0250 279339 - 280709 + | glutamate--cysteine ligase Nham_0251 280821 - 281438 + | hypothetical protein Nham_0252 282430 - 281663 - | peptidase S26A, signal peptidase I TERM 282 282201 - 282151 - G 71 -12.7 -3.05844 | opp_overlap 282159, overlap 282187 CGGGCCAGCGGAAGA CCACGACATCGCCGCGTT-TGGGCA GTT CGCCGAAAACGCG-CGATGTCTCGG GAAACGAAACATGGA Nham_0253 283854 - 282427 - | peptidase U62, modulator of DNA gyrase TERM 283 283029 - 283043 + g 72 -2.7 -4.68103 | GCTGCCCCATCAGTC CCGCG AAGGC CGAGG TTTTCTTGCGGTTGA Nham_0254 284637 - 284077 - | invasion associated locus B Nham_0255 285079 - 285936 + | cytochrome-c oxidase TERM 284 286064 - 286090 + G 74 -10.1 -3.76373 | gap 1, overlap 286063 CACGACGACGACCAC GCG-CACCACCC GACC GGGTGGCGGCGC TTTGCGTATTCGACC Nham_0256 286019 - 287632 + | cytochrome-c oxidase TERM 285 287684 - 287641 - f 81 -15.3 -2.61216 | gap 1, overlap 287633 287637 GCAGTAAGCAAGTCA TGTGACTGTGCGCGGCGCGC CTGGT GCGCGCCGCGCACC-CAACA AAGCGAACTGTATGC TERM 286 288228 - 288286 + G 100 -12.2 -4.8083 | overlap 288231 288233 CCGCCGGCGCACTGC CGCCGGTGGTGGCGTGGGCGGCGGCGAC GGG GTCGCTGTCGGTCGAGCCGCTGCTGCTG TTTTTGATCATCTTC TERM 287 288231 - 288283 + G 78 -14.7 -2.99543 | overlap 288228 288233 CCGGCGCACTGCCGC CGGTGGTGGCGTGGGCGGCGGCGAC GGG GTCGCTGTCGGTCGAGCCGCTGCTG CTGTTTTTGATCATC TERM 288 288233 - 288281 + G 75 -13.7 -3.04018 | overlap 288231 288228 GGCGCACTGCCGCCG GTGGTGGCGTGGGCGGCGGCGAC GGG GTCGCTGTCGGTCGAGCCGCTGC TGCTGTTTTTGATCA Nham_0257 287696 - 288682 + | protoheme IX farnesyltransferase TERM 289 288787 - 288752 - g 88 -7.3 -4.84359 | opp_overlap 288782 288784, overlap 288753 288754 CGAGGCGCAGAAAAA GCGCCGGCGCGAGCG CTCGAT CGCGATCGCCTGCGC GCTCGGAATCCTGGT Nham_0258 288699 - 288863 + | CoxF protein TERM 290 288997 - 289021 + G 72 -12.1 -3.32268 | GGTCGCGCTCATGGT CGGCGCCGC CTACGCC GCGGTGCCG TTCTACAACTGGTTC TERM 291 289095 - 289079 - g 76 -9.3 -4.09864 | overlap 289062 ACGCAGGTCGCAAAA GTCGCGC CGA GCGCGGC ACCGCTTGCGCGCAC Nham_0259 288869 - 289519 + | cytochrome C oxidase assembly protein TERM 292 289534 - 289553 + F 88 -5.6 -5.27023 | ACCTTCGACGGCTGA CGCGTTTG GTTG CTGACGCG TTTTGTTTTTGGGAT TERM 293 289894 - 289912 + G 78 -11.8 -3.7282 | overlap 289903 289906 CGGCATGATCCTGTT CATCACCT CCG AGGTGATG TTCTTCGTCGCCTGG Nham_0260 289622 - 290476 + | cytochrome c oxidase, subunit III TERM 294 290532 - 290502 - f 85 -16.9 -2.63357 | opp_overlap 290502 290507, overlap 290507 AAGCAGCTCAAATAT GGAAAGGGCGGCC GCTGG GGCCGCCCTTTTC TCTTCCGGGGAATGT TERM 295 290502 - 290532 + F 100 -19.1 -3.02263 | opp_overlap 290502 290507, overlap 290507 AAGCAGCTCAAATAT GGAAAGGGCGGCC GCTGG GGCCGCCCTTTTC TCTTCCGGGGAATGT TERM 296 290507 - 290527 + F 100 -15.4 -4.66537 | opp_overlap 290502 290507, overlap 290502 GCTCAAATATGGAAA GGGCGGCC GCTGG GGCCGCCC TTTTCTCTTCCGGGG TERM 297 290527 - 290507 - f 100 -15.4 -3.81137 | opp_overlap 290507 290502, overlap 290502 GCTCAAATATGGAAA GGGCGGCC GCTGG GGCCGCCC TTTTCTCTTCCGGGG Nham_0261 290551 - 290940 + | hypothetical protein TERM 298 291057 - 291090 + F 70 -2.4 -4.87133 | gap 2, overlap 291036 291058 GGCATAGCTGGTCGA AGGATGTCGTCGGTTC TCTT GACCCG-CG-CATCCA TTTTCTTTCGGAGAT TERM 299 291491 - 291509 + G 72 -4.5 -4.56597 | overlap 291490 CTGGCCGCAGTTGAC GCCCG ATACCATCG CGGGC TTTTTCGGCCGGCCG TERM 300 292083 - 292120 + G 100 -16.4 -4.19238 | GTGTATTATTTCACC TCGGCGGT-CGCGCTCGG CGCG CCG-GCGCGCACCGTCGA TTTTACCGTTCCGAC Nham_0262 291372 - 292790 + | threonine synthase Nham_0263 292787 - 294076 + | peptidase M16-like Nham_0264 294254 - 294838 + | GCN5-related N-acetyltransferase TERM 301 295204 - 295168 - g 71 -9.4 -3.72695 | ATGTTCGGCATCAAA TCGCAGCCGGA-GCGGGC GGC GCCCGCATCAGGC-GAGA CGGCTTCCGCGCCCA Nham_0265 294997 - 295683 + | hypothetical protein TERM 302 295822 - 295796 - T 71 -10.3 -3.55604 | gap 1, overlap 295794 CGACTCAATGAAATA TCGATCATCCGC TTTC GCGGATGAT-GA CGCCGGCATCGGTAG TERM 303 295864 - 295898 + T 100 -18.7 -3.27406 | opp_overlap 295869, overlap 295869 ACAGCCAGCCGAAAT AAAAAGCCGGCGCGA TGGGT TCGCGCCGGCTTTTG CTTTTATCGTGAAAA TERM 304 295869 - 295893 + T 100 -18.6 -4.74012 | opp_overlap 295869, overlap 295864 CAGCCGAAATAAAAA GCCGGCGCGA TGGGT TCGCGCCGGC TTTTGCTTTTATCGT TERM 305 295893 - 295869 - T 100 -18.6 -5.28942 | opp_overlap 295869 295864 CAGCCGAAATAAAAA GCCGGCGCGA TGGGT TCGCGCCGGC TTTTGCTTTTATCGT Nham_0266 296401 - 295916 - | H+-transporting two-sector ATPase, B/B' subunit Nham_0267 296966 - 296409 - | H+-transporting two-sector ATPase, B/B' subunit TERM 306 296681 - 296721 + g 86 -8.4 -4.64657 | gap 2, overlap 296720 GGGTCCGCGCGGCCG CGAGTTCGAC-CT-CGTAGG CCT TCAACGCAGCGTCGGACTCG TTTTTCAGCGTTTGC TERM 307 296978 - 297024 + r 70 -12.4 -2.73875 | gap 3, overlap 296975 296988 CCACGGGCCTCTCCT CT-GC-GGTTGATCGGGTCCCGG TTTT CCGGGTCCCG-TCAGCCAGCCAG TGATCTTAAAGGGCG Nham_0268 297257 - 297030 - | F0F1 ATP synthase subunit C Nham_0269 298059 - 297316 - | F0F1 ATP synthase subunit A Nham_0270 298510 - 298127 - | FoF1 ATP synthase, subunit I Nham_0271 299075 - 299629 + | hypothetical protein TERM 308 299850 - 299870 + G 80 -5.3 -4.86731 | opp_overlap 299836 TCCTGCTCGCGGCGC TGGCGGTGG GCA CCACGTCCA TTTTGTTTCAGCCCG Nham_0272 299819 - 300235 + | hypothetical protein TERM 309 300266 - 300294 + F 100 -18.2 -4.45168 | GCTCGTCCGGCGCGA CGATCCGGCTGC TCCGC GCGGCCGGATCG TTTCTGTTTTCGAGG Nham_0273 300484 - 301179 + | two component LuxR family transcriptional regulator Nham_0274 304776 - 301267 - | periplasmic sensor hybrid histidine kinase TERM 310 304628 - 304618 - G 81 -6.8 -4.79756 | GACAGAACCGAAAAA CGTC CAC GACG TGCAGTACACCGCCA TERM 311 304991 - 305003 + r 81 -9.1 -4.30576 | CTTCTGTCCTTCGTT CCGGA TAC TCCGG TTTTCATCGTCAACG TERM 312 305688 - 305712 + r 70 -12.1 -2.75064 | overlap 305685 ACGCGAACCGGTACT CGTCCTCGGGT CAA GCCCGAGGACA TGCTTCGCTCGAAAA Nham_0276 306997 - 305768 - | 5-aminolevulinate synthase Nham_0277 308311 - 307289 - | biotin synthase TERM 313 308707 - 308738 + r 84 -16 -2.60615 | opp_overlap 308712, overlap 308712 ATACGGCTTGAAAAT AAAAAGGCCGGCAT CATG ATGCCGGCCTTTTC CTATTTCGAAACCGT TERM 314 308733 - 308712 - R 100 -15.9 -5.45802 | opp_overlap 308707 308712 GCTTGAAAATAAAAA GGCCGGCAT CATG ATGCCGGCC TTTTCCTATTTCGAA TERM 315 308712 - 308733 + r 100 -15.9 -4.49756 | opp_overlap 308712, overlap 308707 GCTTGAAAATAAAAA GGCCGGCAT CATG ATGCCGGCC TTTTCCTATTTCGAA Nham_0278 309506 - 308769 - | OmpA-like transmembrane region TERM 316 309551 - 309536 - R 70 -4 -4.57073 | gap 1 GATTCCGGGCAAAAA GCTG-TC ACT GATCAGC CACACTCGGGAACGT TERM 317 310126 - 310139 + r 70 -3.8 -4.64657 | overlap 310123 TGCTCTCGTTGTGAT CGAG CCCGAA CTCG TTTTTCGCGGTTTCA Nham_0280 311668 - 311426 - | hypothetical protein Nham_0281 311997 - 312251 + | hypothetical protein TERM 318 312297 - 312282 - T 72 -4.6 -4.59773 | opp_overlap 312294, overlap 312284 GTCGATGCTGAAAAA CTGGTC GTCG GACCTG AAAATACAGGTTTGA TERM 319 312405 - 312390 - T 78 -9 -4.24948 | CTACGATAGCCAAAA GCGTCA CATG TGACGC CGTCACGGGTACGCC TERM 320 312569 - 312538 - T 78 -8.6 -4.1196 | overlap 312559 AAGGGACGCTGAAAA GCCACGCCGGGTTT ACCA ATAGCCCGCGTGGC CGACTCCGCCCGACG Nham_0282 313237 - 312683 - | resolvase-like protein TERM 321 313803 - 313785 - g 77 -4.4 -4.87318 | opp_overlap 313791, overlap 313799 TCGAAAAGGCAAAAA GCCTGAGC GCA GAACAGGC GGCGCTTGATGTTGC Nham_0283 313607 - 313891 + | hypothetical protein TERM 322 313901 - 313876 - T 77 -2.5 -5.03145 | gap 1, overlap 313878 313882 313892 CAACGGCTCAAAAAA GACGAAGGCTGC ATA ACAGCCCTAG-C TACCTCTCACTCACT TERM 323 313923 - 313950 + T 86 -9 -4.62069 | overlap 313924 TCACTCACTGATTCC CGCCGGGGCTGC TTCC GTGGTCCCGGCA TTTTTCGGGTCGACG TERM 324 313924 - 313949 + T 79 -12.5 -3.3692 | overlap 313923 CACTCACTGATTCCC GCCGGGGCTGC TTCC GTGGTCCCGGC ATTTTTCGGGTCGAC Nham_0284 315592 - 313901 - | phage integrase TERM 325 317449 - 317424 - g 70 -7.5 -4.10161 | GACCATCTTCGAAAA CCGGTTCATGC ACGT GCAGGAACTGG CGCGGTTCGGGGCAC Nham_0285 316402 - 317691 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 326 318359 - 318329 - g 70 -12.4 -3.14132 | GTCGGTGCTGATGAA CGCGGTGCCGGCCA TGG TCGCCGGCGTCGCG CGCGTCGTCATGGTG hisD 317895 - 319190 + | histidinol dehydrogenase Nham_0287 319187 - 319681 + | hypothetical protein Nham_0288 319776 - 320243 + | protein tyrosine phosphatase Nham_0289 320355 - 321692 + | putative transposase TERM 327 323749 - 323781 + F 79 -7.5 -4.58685 | GTATTGCGGGTTCTT CCAGCACGGCACGTC AGC GACAGGCAGTGCGGG TTTTTCCGCGGGTTT Nham_0292 323887 - 324510 + | Maf-like protein TERM 328 324533 - 324515 - g 71 -9.5 -3.72695 | overlap 324516 324518 ATGCCGGCTAGGAAA CCAGCCG GCGCA CGGCCGG AAAAGCCGTGCCCGA Nham_0293 324500 - 324682 + | zinc-binding protein TERM 329 325352 - 325327 - g 70 -7.5 -4.02022 | opp_overlap 325341, overlap 325328 CGCAAGGAGGACAAA GTCGCGGCC TCGATTTC GGCCGCGAA CACGTTCGGCGTCGT Nham_0294 325063 - 326262 + | phage integrase TERM 330 326262 - 326280 + F 100 -13.1 -5.05113 | CAGGCACGTTGCCTA GGCCCGC ATTAC GCGGGCC TTTTCTTTCTCTGAG TERM 331 326351 - 326388 + F 95 -10.7 -4.86731 | gap 1, opp_overlap 326376, overlap 326309 326352 326370 CGGCAGGAGTTGGGC TGCATCCGGATGCTTCCT AGA AGGA-GCATTCAGATGCG TTTTCTTTCAAAGAA TERM 332 326352 - 326387 + F 77 -12 -3.51557 | gap 1, opp_overlap 326376, overlap 326309 326351 326370 GGCAGGAGTTGGGCT GCATCCGGATGCTTCCT AGA AGGA-GCATTCAGATGC GTTTTCTTTCAAAGA TERM 333 326624 - 326645 + F 100 -15.1 -5.03994 | GTCGAATAACTTCGA GGCGGCTCC TAAC GGGGCCGCC TTTTTCTATGTACAG TERM 334 327119 - 327099 - f 77 -11.8 -3.58522 | opp_overlap 327099 ACGACCACTGCGAAA GCCGCCGC TGCAT ACGGCGGC TTGTTGCGTGTTATG TERM 335 327099 - 327119 + F 78 -11.1 -3.74542 | opp_overlap 327099 ACGACCACTGCGAAA GCCGCCG CTGCATA CGGCGGC TTGTTGCGTGTTATG TERM 336 327972 - 327948 - g 91 -5.6 -5.24531 | gap 1, opp_overlap 327959 327960, overlap 327935 327949 327950 ACGGCTTATAAAAAA CCCGACCGACC ATGC GGCCGG-CGCG CGGCGCAATTTCTGG Nham_0295 327478 - 328680 + | hypothetical protein Nham_0296 328825 - 329229 + | hypothetical protein TERM 337 330155 - 330133 - g 75 -14.8 -2.71364 | opp_overlap 330132 330131 CTATTTTTTTAATGA GCCACGCCGC TTA GCGGCGTGGG GATTAGTCATATGGT TERM 338 331240 - 331252 + G 83 -7.7 -4.62872 | opp_overlap 331251 CAAGTTCGCGCCTCA GCTTG GAG CAAGC TTTTTACGAATTCAT TERM 339 331491 - 331475 - g 77 -4.4 -4.82901 | gap 1, overlap 331479 CCCGCGGTACAAAAA CGCA-CG GCAA CGATGCG CGACCTTCACGACTT Nham_0297 329222 - 332593 + | hypothetical protein Nham_0298 332707 - 333642 + | hypothetical protein TERM 340 334132 - 334178 + F 87 -13 -3.86015 | opp_overlap 334158, overlap 334134 GATTAATAGCGTTGT AACTTGAGGGGATACCGTACTT ACA ACGCGCGGTATCCCCTCACGTA TTTATGCCAGACATA TERM 341 334134 - 334176 + F 88 -15.6 -3.51934 | opp_overlap 334158, overlap 334132 TTAATAGCGTTGTAA CTTGAGGGGATACCGTACTT ACA ACGCGCGGTATCCCCTCACG TATTTATGCCAGACA TERM 342 334659 - 334636 - g 88 -14.6 -3.72527 | opp_overlap 334630 334636, overlap 334625 AAAATCACGGAAGAA GGGCCACACC CAAA GATGTGGCCC TTGCTGCTTAGTTAG TERM 343 334636 - 334659 + G 72 -12.4 -3.30554 | opp_overlap 334636 334625, overlap 334630 AAAATCACGGAAGAA GGGCCACACC CAAA GATGTGGCCC TTGCTGCTTAGTTAG Nham_0299 334182 - 334670 + | HNH endonuclease Nham_0300 334883 - 334671 - | hypothetical protein Nham_0301 335082 - 335732 + | hypothetical protein TERM 344 335732 - 335747 + F 100 -11.8 -5.2853 | opp_overlap 335723 335726 CAAGAAGACTGCATA GCCCCC AATC GGGGGC TTTTCTTTTTCGCTC TERM 345 337499 - 337487 - g 74 -5.5 -4.41486 | CAAAAGAAAATCAAA CTAGC AGA GCCAG AACCATATACGCGGG Nham_0302 336851 - 337783 + | hypothetical protein Nham_0303 338496 - 337780 - | hypothetical protein Nham_0304 338590 - 338937 + | hypothetical protein TERM 346 338937 - 338952 + F 100 -11.8 -5.07486 | GCTGAGACTGCCTTA GGCCCC TTCG GGGGCC TTTTTCTTGGGCGTG Nham_0305 339098 - 339466 + | hypothetical protein Nham_0306 339511 - 340377 + | antirestriction protein TERM 347 340590 - 340573 - f 72 -9.8 -3.75292 | opp_overlap 340573, overlap 340556 AGTGACTATCAATAA CCCCGC GCAAAT GCGGGG TTTTTCTTTTGTCTT TERM 348 340573 - 340590 + F 100 -10.5 -5.60556 | opp_overlap 340556 340573 AGTGACTATCAATAA CCCCGCG CAAA TGCGGGG TTTTTCTTTTGTCTT Nham_0307 340648 - 340911 + | hypothetical protein TERM 349 340938 - 340960 + F 100 -13.4 -4.88405 | TGACCTATCCCCACA CCGCCCCTGT GTG AGAGGGGCGG TTTTCTTTCGGGCTT Nham_0308 340991 - 341329 + | endodeoxyribonuclease RusA TERM 350 341731 - 341706 - g 76 -9.6 -4.08706 | opp_overlap 341706 TTGCGAGGAGATAAA CGGCGGCGCC TCGATC GGCGCGACCG TCCTCTTCCAGTTCA Nham_0309 341665 - 342351 + | hypothetical protein Nham_0310 342348 - 342707 + | hypothetical protein Nham_0311 342710 - 344599 + | hypothetical protein Nham_0312 344912 - 344586 - | hypothetical protein Nham_0313 344959 - 346329 + | hypothetical protein Nham_0314 346336 - 347844 + | hypothetical protein TERM 351 348972 - 348945 - g 81 -4 -5.06414 | gap 1, opp_overlap 348958, overlap 348947 CGTCGGCAAGAAAAA CATCGCGGGCCTC TTT GCCGCCCGCAA-G TCGTTCGACGGCATC TERM 352 348971 - 348947 - g 72 -7.7 -4.16307 | opp_overlap 348958, overlap 348945 TCGGCAAGAAAAACA TCGCGGGCCTC TTT GCCGCCCGCAA GTCGTTCGACGGCAT Nham_0315 347848 - 349305 + | hypothetical protein Nham_0316 349822 - 350184 + | hypothetical protein TERM 353 350530 - 350508 - g 75 -12 -3.64703 | CTGCTCGGAGGCAAA CCGACGGCGA ACA TCGCCATCAG CGCCGAGGTGCGGCA Nham_0317 350187 - 350573 + | hypothetical protein TERM 354 350696 - 350716 + F 70 -11.9 -2.72661 | TGGTCTGTTGCGCTG CCTGCTTTG GAA CGAAGCAGG TGGTTGGGGATGCTG Nham_0318 350726 - 352225 + | integrase catalytic subunit Nham_0319 352225 - 353088 + | IstB-like ATP-binding protein Nham_0320 353643 - 353245 - | hypothetical protein Nham_0321 353869 - 353645 - | hypothetical protein Nham_0322 354598 - 353870 - | hypothetical protein Nham_0323 355588 - 355890 + | hypothetical protein Nham_0324 356792 - 356016 - | hypothetical protein Nham_0325 358089 - 356920 - | phage integrase Nham_0326 358329 - 358090 - | hypothetical protein TERM 355 358278 - 358299 + g 93 -17.3 -3.5002 | opp_overlap 358266, overlap 358273 CAACCCGGCGCAGGC CGCGGGGGA CGAT TCCCCCGCG TTGGTTGTCGTTGGC Nham_0327 358868 - 358338 - | hypothetical protein Nham_0328 359347 - 358937 - | hypothetical protein TERM 356 359287 - 359297 + g 76 -6.8 -4.42238 | CGTCATAATCCGAGT TGCC GCC GGCA TTTTCCTTCGCCTCG Nham_0329 359516 - 360127 + | hypothetical protein Nham_0330 360182 - 361186 + | exonuclease Nham_0331 361194 - 362111 + | hypothetical protein Nham_0332 362470 - 362135 - | hypothetical protein TERM 357 362202 - 362228 + g 72 -4.2 -4.66833 | overlap 362204 GGCGTGATGCTCTTA ATGCCGTACAGG TTT CCGGTGCGGCTG TTTTTCAACTTCCAA TERM 358 362204 - 362226 + g 79 -11.2 -3.94933 | overlap 362202 CGTGATGCTCTTAAT GCCGTACAGG TTT CCGGTGCGGC TGTTTTTCAACTTCC Nham_0333 364095 - 362467 - | phage terminase TERM 359 363021 - 363010 - G 71 -5.8 -4.30995 | CTGCGGACAAAAGAA GTGC GGCT GCAC GACATAATCGTCGCC Nham_0334 364511 - 364098 - | phage terminase, small subunit, putative, P27 TERM 360 364723 - 364700 - R 75 -9.4 -3.92075 | overlap 364675 ATCGTGATCCAGAAA GCCGCGGACG TACT CGGTCGCGGC TGCAATCTGCGCCTC Nham_0335 365558 - 365205 - | HNH nuclease / phage phi-105 holin-like protein TERM 361 365741 - 365706 - R 75 -9.6 -3.87869 | opp_overlap 365710 CGAACCCCTTAGAAA CGGCGGGGGAATCCAC CGTC GCGGATTCCCCCTTGG TTGCGCGCGTTCAGC TERM 362 365710 - 365737 + r 87 -15.6 -3.34192 | opp_overlap 365706 CCCCTTAGAAACGGC GGGGGAATCCAC CGTC GCGGATTCCCCC TTGGTTGCGCGCGTT Nham_0336 366170 - 365784 - | hypothetical protein TERM 363 366222 - 366199 - R 78 -8 -4.46775 | opp_overlap 366200 366201, overlap 366200 366201 366203 TATTGAAAAGAGAAA GTGAGCGGGC CGAA GCCCGCTCGT TGATGGATTAGCTGG TERM 364 366221 - 366200 - R 71 -11.5 -3.2698 | opp_overlap 366200 366201, overlap 366199 366201 366203 ATTGAAAAGAGAAAG TGAGCGGGC CGAA GCCCGCTCG TTGATGGATTAGCTG TERM 365 366200 - 366221 + r 82 -13.7 -3.22388 | opp_overlap 366199 366200 366201 366203, overlap 366201 ATTGAAAAGAGAAAG TGAGCGGGC CGAA GCCCGCTCG TTGATGGATTAGCTG TERM 366 366220 - 366201 - R 81 -15 -2.55104 | opp_overlap 366201 366200, overlap 366200 366199 366203 TTGAAAAGAGAAAGT GAGCGGGC CGAA GCCCGCTC GTTGATGGATTAGCT TERM 367 366201 - 366220 + r 81 -15 -2.53112 | opp_overlap 366200 366199 366201 366203, overlap 366200 TTGAAAAGAGAAAGT GAGCGGGC CGAA GCCCGCTC GTTGATGGATTAGCT TERM 368 366218 - 366203 - R 70 -11.8 -2.80021 | opp_overlap 366201 366200, overlap 366201 366200 366199 GAAAAGAGAAAGTGA GCGGGC CGAA GCCCGC TCGTTGATGGATTAG Nham_0337 367378 - 366230 - | phage major capsid protein, HK97 TERM 369 367250 - 367268 + g 78 -10.2 -4.011 | GCGCTTGGTCAGATC GGCAACCG GTG CGGTGGCC TTCTTTACGTCTTCC Nham_0338 367919 - 367386 - | peptidase U35, phage prohead HK97 Nham_0339 369139 - 367916 - | Phage portal protein, HK97 Nham_0340 369606 - 369340 - | hypothetical protein Nham_0341 370481 - 369585 - | hypothetical protein Nham_0342 371612 - 370827 - | hypothetical protein TERM 370 371268 - 371298 + g 76 -7.5 -4.30576 | gap 1, overlap 371257 371270 CTTCTCGTCAGCCCA TGCCGCGGCTG-CG ATCT CGTCGGCCGTGGGA TTTTCCTCGTCGAGG TERM 371 371671 - 371695 + r 75 -9.4 -3.87815 | gap 1, opp_overlap 371688 371689, overlap 371671 GGGTAAGGGGACATC GG-GACAGTTC TAAA GAACTGTCACC TTTGTCCCCCTAAGA TERM 372 371744 - 371734 - R 72 -5.4 -4.4595 | opp_overlap 371738 GGACAAAATTCAAAA TGTC CGG GACA TGTCCCGTTGTCCCC TERM 373 371765 - 371785 + r 74 -6.1 -4.44046 | CGTTGTCCCCTTAAC TCGGCCAGT ACC ATTGCCCGA TTTGTTTCACCTGAC Nham_0343 373799 - 371760 - | ATPase-like protein TERM 374 373540 - 373552 + g 71 -4.7 -4.44548 | GTTCCACGCTTACCG CGGGC AAG GCCGG TTTTCATTAGATGTA Nham_0344 375360 - 374272 - | hypothetical protein TERM 375 374797 - 374814 + g 74 -9.1 -3.87815 | GCTGTAGCCGGCGTC GCCTTCG AGCA CGAGGGC TTTGTCAGCGTCGAG Nham_0345 377809 - 375350 - | hypothetical protein TERM 376 377182 - 377205 + g 83 -8 -4.62069 | CACCAGTGACAGCCT CGAGCGGCGC GTGC GTGCTGCGCG TTTTTCCGATCGACA Nham_0346 378489 - 377806 - | ABC transporter related TERM 377 378211 - 378198 - G 72 -4.5 -4.59853 | TGAATTGTTGAAAAA CCAGT CCCA ACCGG TCCCGGCGCAGCGCT Nham_0347 379356 - 378592 - | band 7 protein Nham_0348 380750 - 379353 - | hypothetical protein TERM 378 379566 - 379529 - G 74 -12.6 -3.32844 | opp_overlap 379521 379551, overlap 379530 CGTTCCAGTCGAGAA CCTCGGCGGGCAGGCC GCGCAT GGCCTGCGCGCCGACT TGCGCCGGACCTTTG TERM 379 379565 - 379530 - G 80 -16.1 -2.59564 | opp_overlap 379521 379551, overlap 379529 GTTCCAGTCGAGAAC CTCGGCGGGCAGGCC GCGCAT GGCCTGCGCGCCGAC TTGCGCCGGACCTTT TERM 380 380054 - 380076 + g 74 -12 -3.53444 | TGTCGCCATTGACGA GGTCCACGGT GCG ACCGTCGACC TTTCGCAGCAACTCA TERM 381 380151 - 380171 + g 76 -10.3 -3.86015 | opp_overlap 380151 380150 CGCGCTGGCGGAAAG GCTGGCCGC CTC GCGGACGGC TTTCTCGGCCCAATC TERM 382 380253 - 380226 - G 74 -9 -3.86015 | opp_overlap 380226 380228 CAGGCTGCGGATAAA GGCGACGGCGTC GTTC GTCACCTTCGCC GTCATTGCGTCCGTC TERM 383 380268 - 380289 + g 100 -5.1 -6.02345 | gap 1 CGTCATTGCGTCCGT CGGTT-CCGG TTG CTGGGAGCCG TTTTTTTTGTCCTTG TERM 384 380996 - 381023 + H 75 -9.2 -3.83026 | gap 1, overlap 380997 CCGTGGCAGTGGACC T-CACGATGGTGG CGT CCACCATCGCGTA TTTCATGTCCGGGGC TERM 385 380997 - 381021 + H 88 -14.3 -3.5032 | overlap 380996 CGTGGCAGTGGACCT CACGATGGTGG CGT CCACCATCGCG TATTTCATGTCCGGG Nham_0349 381121 - 383289 + | periplasmic sensor hybrid histidine kinase TERM 386 383313 - 383359 + F 74 -7.8 -4.1552 | TCCCAGGACTCGGTT TCAGCCCACAGGTGCGGACCGT ATG GCGGTCCGTCCGTGTGATCGGA TTTGTTGCAAAGGTC TERM 387 384153 - 384209 + G 71 -11.4 -3.44622 | gap 1, overlap 384154 384171 GTGCTGATCTACGGC TTTGCCG-CCGCCGTGCTCGGCGGCCT CTCG AGCCCGCTCGGCGCGGTGGTCGGCGGC TTCCTTGTCGGCATC TERM 388 384154 - 384208 + G 74 -14.9 -2.66452 | gap 1, overlap 384153 384171 TGCTGATCTACGGCT TTGCCG-CCGCCGTGCTCGGCGGCCT CTCG AGCCCGCTCGGCGCGGTGGTCGGCGG CTTCCTTGTCGGCAT Nham_0350 383484 - 384362 + | inner-membrane translocator TERM 389 384429 - 384458 + G 71 -5.7 -4.32034 | GCTCCGGGCAGGCCG TGACGCTCGGC ACCGCAAC GTCGATCGTCA TTTTGCTGCTGCTGC Nham_0351 384365 - 385402 + | inner-membrane translocator TERM 390 385467 - 385418 - g 71 -13.6 -2.63435 | gap 1, opp_overlap 385433, overlap 385410 385417 GCAACGACTGAGAAC CGCTGC-GCTCTCGGCGGCGA TCATCGCCT TTGCCGCCGCAAGCGGCAGCG CCCTCGCCGAGGGGA Nham_0352 385392 - 386624 + | extracellular ligand-binding receptor TERM 391 386619 - 386663 + T 100 -19.5 -4.27316 | overlap 386617 386620 386622 GGCGCCGGGACGGGC GGGTAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTATGA TTTTGAATTGACGCG TERM 392 386620 - 386662 + T 100 -23 -3.16068 | overlap 386617 386619 386622 GCGCCGGGACGGGCG GGTAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTATG ATTTTGAATTGACGC TERM 393 386622 - 386660 + T 100 -27.8 -3.13906 | overlap 386617 386620 386619 GCCGGGACGGGCGGG TAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTA TGATTTTGAATTGAC Nham_0353 387919 - 386729 - | hypothetical protein TERM 394 387743 - 387714 - G 70 -12.2 -3.14211 | gap 1 ATCGCGTTCCAGTAA GCGC-CGGCCTCT TCCTC AAAGGCCGCGCGC GCCTCCTGATACGCG Nham_0354 388072 - 389154 + | methyl-accepting chemotaxis sensory transducer Nham_0355 389907 - 389203 - | ABC transporter related TERM 395 389774 - 389829 + g 91 -19 -3.06796 | gap 1, overlap 389769 389754 ATGTTGCAGATCGCG CGCAGCGTGGTGGTCTTGC-CGGCGCC GTT GGCGCCGAGCAGCGCCGTCATGCTGCC TTCGCTGAGATGGAA Nham_0356 390785 - 389913 - | ABC transporter related TERM 396 391484 - 391441 - g 91 -16.6 -3.59979 | gap 1 CTGCCCGAGGTGAAA CTCGGCCTGCTGCCGGGTGCC GGT GGCACCCAGC-GCCTGCCGCG TGCGGTCGGTCCGGA TERM 397 392116 - 392082 - g 81 -13.4 -3.63515 | CGTCATGCGGAAGAA CTTCGAGGCCACCGCG GCG CGCGGCGGCATCGCGG CGGACGAGCCGGCTA Nham_0357 391060 - 393183 + | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding TERM 398 393723 - 393700 - g 75 -12.4 -3.5393 | gap 1, overlap 393683 393704 AGTACGCGCTGGAAA GC-CAGCGGCG TAT CGCCGCCGCGC AGCAGGGCGGCAGGT Nham_0358 393180 - 394367 + | Acetyl-CoA C-acyltransferase Nham_0359 394913 - 394509 - | hypothetical protein TERM 399 395961 - 395947 - g 71 -12.8 -3.01712 | overlap 395909 TTGCGCTGCTCAACA CCGGCG CGA CGCCGG TCGCCTCGAAAAACA TERM 400 396446 - 396489 + G 95 -16.7 -3.85817 | gap 1, opp_overlap 396445 396448, overlap 396448 CGTCATTCAGGAGAC CAC-GGCGCTCGGCGCGGCG TATCT CGCAGGGCTGAGCGCCGGTG TTTATCCGGAGCCAT TERM 401 396448 - 396486 + G 90 -19.5 -2.70946 | opp_overlap 396445 396448, overlap 396446 TCATTCAGGAGACCA CGGCGCTCGGCGCGGCG TATCT CGCAGGGCTGAGCGCCG GTGTTTATCCGGAGC TERM 402 396486 - 396448 - g 83 -17.3 -2.66964 | opp_overlap 396448 396446, overlap 396445 TCATTCAGGAGACCA CGGCGCTCGGCGCGGCG TATCT CGCAGGGCTGAGCGCCG GTGTTTATCCGGAGC Nham_0360 395130 - 396641 + | glycerol kinase Nham_0361 396748 - 397458 + | carbonic anhydrase Nham_0362 397971 - 397546 - | putative PAS/PAC sensor protein TERM 403 397784 - 397800 + g 76 -5.8 -4.58663 | overlap 397779 397771 TCGCGATATCCGGCC CAGTGC CGGGC GCGCTG TTTTTCCGGAATGAT metH 401760 - 397975 - | B12-dependent methionine synthase TERM 404 398068 - 398104 + g 81 -13.6 -3.55444 | gap 1 GGCGGAGGCGTCGTT GGCGGGCGTCGGCGCCG GCAC CGGCGTCG-CGGCGGCC TTTCCGGACTGGCCG TERM 405 399077 - 399097 + g 74 -9.6 -3.85864 | overlap 399085 ACCGCATTGGCGCGG GCGGCGGC GAGCG GCAGCCGC TTCTTGTCCTGCTGG TERM 406 399339 - 399319 - G 73 -12.5 -3.21218 | ACCGCCGATCAGCAA CGGCAGGTC GAG GCCCTGCCG TTCCAGCTCGGCCGC TERM 407 401710 - 401724 + g 73 -12.8 -3.15544 | ATCCTTGAAGCGCTC GCCGCG AAA CGCGGC TTCGTCGAACTGCAG TERM 408 402037 - 401985 - R 87 -6.9 -4.88736 | gap 1, overlap 401988 401989 CATGACGGAGAAAAA CTATGCCGCCTTCTGCGCGGCGTC TGGCCG GATGCCGAGCAGATGGCAG-ACCG TGAATACGAGGTCGG Nham_0364 402899 - 401985 - | 5,10-methylenetetrahydrofolate reductase Nham_0365 404097 - 403237 - | prephenate dehydratase TERM 409 403441 - 403467 + g 74 -14.4 -2.57132 | overlap 403440 TTTTGTCATGTTGAC GCCATTGGTGGC GAA GCCGCCCATGGC CTTGTAGAGCGCGGC Nham_0366 404297 - 404142 - | putative transposase TERM 410 404603 - 404574 - R 82 -10.1 -4.2349 | gap 1 CTGCGATAGCCAAAA GCGTCACATGTGAC GCC GTCACAGGT-ACGC CCGATTCCTCGAACA TERM 411 404752 - 404721 - R 78 -8.6 -4.1196 | overlap 404742 AAGGGACGCTGAAAA GCCACGCCGGGTTT ACCA ATAGCCCGCGTGGC CGACTCCGCCCGACG TERM 412 405234 - 405211 - R 90 -16.7 -3.24245 | overlap 405206 TTAGCGACAAGCGAA GCCCGCCGG GGTAAG CCGGCGGGC AGAAAGATCAACCTA Nham_0367 405463 - 405242 - | cold-shock DNA-binding domain-containing protein TERM 413 405630 - 405605 - R 100 -14.7 -5.13741 | gap 1 GGAATGCAAGAAAAA CCCGCCGGTCCA CGC CGG-CCGGCGGG GCCTCCCAGGTCATG Nham_0368 406249 - 405872 - | hypothetical protein Nham_0370 407066 - 406815 - | hypothetical protein TERM 414 411211 - 411186 - R 100 -19.1 -5.18726 | TCGTGACAAGAAAAA GGCCCGACATC GTTA GATGTCGGGCC GGTCTGAGATTTCTG TERM 415 411364 - 411349 - R 100 -11.8 -4.84918 | GGCAGAAATAGAAAA CCCCGC CAGA GCGGGG GTTAAGCTGTGCCTG TERM 416 411452 - 411483 + r 95 -10 -4.72986 | opp_overlap 411452 CCCGAGCCCCAATTA GGCCTGCTGCGTCG TCTC CGTTTCAGCGGGCC TTTTTGGTGGGGCTC TERM 417 412787 - 412798 + r 80 -2.2 -5.24129 | overlap 412778 TGGCGACGGCTACAT TGTG GTGC CGCA TTTTTTCTGCCCGCA Nham_0374 413918 - 413490 - | hypothetical protein TERM 418 414565 - 414555 - R 74 -8.2 -4.14627 | overlap 414556 CGCTCAGACAAAGAA CGCG CCA CGCG ATGACGACGAACCTG Nham_0376 415614 - 414838 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 419 416148 - 416125 - g 77 -13.8 -3.30771 | opp_overlap 416122 CCATACCTTCGAGAA GGGCGGACCC AACC GGGTCGGCCC CAATCTCTACGGCAT Nham_0377 415847 - 416401 + | cytochrome c, class I TERM 420 416525 - 416479 - f 100 -27.8 -2.55267 | opp_overlap 416475 AAATATTGGAATCGA TCACGTTCATGATTTTAGATCG AAT CGATCCAAAATCATGAACGTGA TCGATAGCGTTTTCG TERM 421 416696 - 416684 - f 75 -5.5 -4.59773 | CGTCATCCCGAAAAA CCGAC ATA ATCGG GCGAAACACCGCTTT Nham_0378 416792 - 418771 + | extracellular solute-binding protein TERM 422 419512 - 419528 + G 78 -12.3 -3.76492 | CCGTACAAGGTCGGC CGGTTCG AGT CGAACCG TTTCATCGAGTTCGA Nham_0379 418786 - 420672 + | extracellular solute-binding protein Nham_0380 420675 - 421784 + | binding-protein-dependent transport systems inner membrane component TERM 423 422064 - 422091 + G 72 -12 -3.31461 | gap 1, opp_overlap 422058 422059 ATCCGGAAACCGCGT TCGGCGGC-GACT TCG AGACCGCCGCCGA TTATCGCGATCCCTA Nham_0381 421790 - 422962 + | binding-protein-dependent transport systems inner membrane component Nham_0382 422969 - 424600 + | ABC transporter related Nham_0383 425447 - 424602 - | NLP/P60 Nham_0384 426822 - 425440 - | leucyl aminopeptidase TERM 424 426431 - 426444 + g 74 -2.3 -4.87665 | overlap 426411 TCGACGCCTTCGGGC GGCAC CAGC GTGGC TTTTTGTGCATCGGC Nham_0385 426973 - 427782 + | tetratricopeptide TPR_2 Nham_0386 428852 - 427875 - | type II secretion system protein TERM 425 427972 - 427989 + g 74 -9.8 -3.82191 | overlap 427984 GGGACCGTCAGCTTG GGCGGC AGGGCG GCCGCC TTCTTCTCGGCTTCG TERM 426 428401 - 428363 - G 70 -11.8 -3.13403 | gap 1, opp_overlap 428354 428399, overlap 428361 428390 CGTTCTTCAGGAACA GCATCGGCGCCTGCA AGCCGAAAAA CGC-GGCGCCGATGC AGATGCCGATCTTGA Nham_0387 429836 - 428862 - | type II secretion system protein TERM 427 429484 - 429464 - G 80 -14.7 -3.17075 | CCGCCGCGAATGCAA GGCCGACCG CGG CGATCGGCC CGGCTCCCGAAAACA Nham_0388 431318 - 429849 - | type II secretion system protein E TERM 428 429976 - 429933 - G 77 -13.7 -3.28712 | overlap 429915 429934 GGCGCGCTCCCAGAA CCGCGGCCGGCCGATTCCG GTCGAA CGGTGTCGGCCGACCACGT TCCCGTTGGCGTCCT TERM 429 429975 - 429934 - G 83 -17.2 -2.57132 | overlap 429915 429933 GCGCGCTCCCAGAAC CGCGGCCGGCCGATTCCG GTCGAA CGGTGTCGGCCGACCACG TTCCCGTTGGCGTCC Nham_0389 432608 - 431340 - | pilus assembly protein CpaE TERM 430 431632 - 431667 + g 74 -2 -4.87626 | overlap 431618 431633 431633 431660 TAGAGCGGAGGCCGG TC-GTTCGGTCGTGCT GCCTTG AGCA-GATCGAACAGG TTTTTCGTGTTGCGA Nham_0390 433345 - 432605 - | pilus assembly protein CpaD Nham_0391 434827 - 433367 - | type II and III secretion system protein TERM 431 434050 - 434073 + g 70 -7.5 -4.07568 | overlap 434048 TCGCCTGAACGGTCG GCATCGTCA CGCCGT TGATGATGC TTTTGCCGAAGCCGC Nham_0392 435625 - 434843 - | Flp pilus assembly CpaB TERM 432 435580 - 435566 - G 70 -12.8 -2.87132 | TCCGCTCGCGAGATA GGCGGC AAG GCCGCC GGCACCGACTGCGAT Nham_0393 436277 - 435753 - | peptidase A24A, prepilin type IV TERM 433 436010 - 436028 + g 76 -8.1 -4.18018 | gap 1, opp_overlap 436010, overlap 436010 CGAAGCCGAACCAAA G-GGCGGC CGCG GCCGCCAC TTTTGCGTCGCCGCC TERM 434 436050 - 436010 - G 81 -12.4 -3.93369 | gap 1, opp_overlap 436010 436010 CGAAGCCGAACCAAA GGGCGGCCGCGGCCGCCAC TTTT GCGTCG-CCGCCGCCGACC CAGCCCATCGCGAAA TERM 435 436579 - 436546 - R 89 -16.1 -3.31188 | opp_overlap 436553, overlap 436553 GAGCAGAAGCAGGAA CAGAAAAGGCCCCGG CATA CCGGGACCTTTTTTG AGCGCGAAACGGAAG TERM 436 436572 - 436553 - R 100 -12.8 -4.71186 | opp_overlap 436553, overlap 436546 AGCAGGAACAGAAAA GGCCCCGG CATA CCGGGACC TTTTTTGAGCGCGAA TERM 437 436553 - 436572 + r 100 -10.6 -5.00616 | opp_overlap 436553 436546 AGCAGGAACAGAAAA GGCCCCGG CATA CCGGGACC TTTTTTGAGCGCGAA Nham_0394 436773 - 436603 - | Flp/Fap pilin component Nham_0395 437096 - 437581 + | hypothetical protein TERM 438 437647 - 437687 + F 100 -20.7 -3.6268 | overlap 437642 GTTCCGCGACAGCGC GGCTAGAGTCTGATCCAAC TCC GTTGAATCAGATTCTAGCC TTATCCTTTCGATTG Nham_0396 437888 - 438457 + | TadE-like Nham_0397 438471 - 439085 + | TadE-like TERM 439 439146 - 439127 - T 100 -12.8 -6.23545 | opp_overlap 439127 TGCAAATAAAAAAAA GGCCGCGC TGAC GCACGGCC TTCGGTAATCCGATC Nham_0398 439416 - 439210 - | cold-shock DNA-binding domain-containing protein TERM 440 439257 - 439282 + g 72 -11.9 -3.36492 | ATTTGCCAGAGCGGC GATCAGCGACG ATCT CGTAGCTGATC TTCTGGCCTTCACGC TERM 441 439593 - 439607 + r 86 -5.7 -5.07567 | opp_overlap 439593 CAGGCCGCAAAACAA TCCTG ACGTG CAGGA TTTTTTAAGATGTGC Nham_0399 439974 - 439693 - | translation initiation factor IF-1 TERM 442 439948 - 439962 + g 71 -8.6 -3.93256 | overlap 439935 GGTGACCAGTCCTTC GAACTG GAT CAGTTC TTCTTTCGCCATATG Nham_0400 441826 - 440393 - | DEAD/DEAH box helicase-like TERM 443 440510 - 440528 + g 74 -11.6 -3.51232 | opp_overlap 440496, overlap 440506 440511 ACGGGAGGGCTCATG CCGGCCGG CTT CCGGCCGC TTCGTTTGCGGCACG TERM 444 440511 - 440527 + g 78 -15.1 -2.70525 | opp_overlap 440496, overlap 440510 440506 CGGGAGGGCTCATGC CGGCCGG CTT CCGGCCG CTTCGTTTGCGGCAC TERM 445 441268 - 441257 - G 75 -3.6 -4.82901 | GGTGGCCGAGAAAAA CAGC GTCT GCCG TTTGACCGGCAGCTT Nham_0401 443178 - 442300 - | pseudouridine synthase TERM 446 442598 - 442624 + g 71 -13.7 -2.66634 | overlap 442596 CAGGTGAGTTGAATT CCCTCCTCCCT TGCGC GGGGAGGGGGG TGATCTGGTGCAATG Nham_0402 443231 - 444178 + | signal recognition particle-docking protein FtsY Nham_0403 444282 - 444881 + | intracellular septation protein A Nham_0404 445234 - 445608 + | hypothetical protein TERM 447 445596 - 445584 - T 80 -4.7 -4.87892 | overlap 445585 445586 TCCGAACAAAATAAA GGCCC TGT GGGCA AGGGCTAAGTAAGGA TERM 448 445827 - 445801 - T 88 -10.8 -4.46493 | opp_overlap 445802, overlap 445802 TCAAACACATGAAAA GCGCACCGGC GGCGATG GCCGGTGCGT TTGATAATTTGACCC TERM 449 445802 - 445826 + T 100 -14.3 -3.8901 | opp_overlap 445801 445802 CAAACACATGAAAAG CGCACCGGC GGCGATG GCCGGTGCG TTTGATAATTTGACC TERM 450 445826 - 445802 - T 86 -14.3 -3.26811 | opp_overlap 445802, overlap 445801 CAAACACATGAAAAG CGCACCGGC GGCGATG GCCGGTGCG TTTGATAATTTGACC Nham_0405 446229 - 445867 - | hypothetical protein Nham_0406 446818 - 446447 - | hypothetical protein TERM 451 447258 - 447277 + r 100 -11.4 -5.45802 | opp_overlap 447251 CTCCAAGACCGCTCG GGACCGGC GAAA GCTGGTCC TTTTTCTTTTGCGAG Nham_0407 448244 - 447447 - | hypothetical protein Nham_0408 451227 - 448510 - | aconitate hydratase TERM 452 448626 - 448605 - G 73 -13 -3.18849 | overlap 448603 448619 GGCAGAGCAGCAAGA CGCGACGG AGCGAA CCGTCGCG GGAGACGATATCCGC TERM 453 450620 - 450630 + g 71 -5.4 -4.46976 | CTGCGGGTCTTCTTG CTGA TGG TCAG TTTCTCTTTCTTCGT Nham_0409 451460 - 452074 + | cytochrome c biogenesis protein CcmA TERM 454 452225 - 452262 + G 71 -12.5 -3.04018 | overlap 452232 452234 TCGCCGGGATGTCAG CGTCGCGCTGCGCGTCG GCGG CGGCGCGCTGATCGGCG TGCTGTTTTTCCTCA TERM 455 452232 - 452267 + G 93 -9.6 -4.72986 | gap 1, overlap 452225 452234 GATGTCAGCGTCGCG CTGCGCGTCGG-CGGCG GCG CGCTGATCGGCGTGCTG TTTTTCCTCACCGTC TERM 456 452234 - 452265 + G 82 -10.8 -3.98256 | gap 1, overlap 452225 452232 TGTCAGCGTCGCGCT GCGCGTCGG-CGGCG GCG CGCTGATCGGCGTGC TGTTTTTCCTCACCG Nham_0410 452187 - 452855 + | heme exporter protein CcmB Nham_0411 452950 - 453681 + | heme exporter protein CcmC Nham_0412 453687 - 453866 + | Heme exporter protein D (CcmD) Nham_0413 453863 - 454456 + | periplasmic protein thiol TERM 457 455107 - 455130 + G 93 -8 -5.00616 | opp_overlap 455107 TATCTCAAGGACCAA CGGCGCGGCA TCAT TGCAGCGGCG TTTTTTCGGAAGCAG TERM 458 455273 - 455292 + G 88 -7.8 -4.87786 | CGCGCCCGAAGATTG CGCCTCAT TGTG AGGAGGCG TTTTTCTCGACTTGC Nham_0414 454774 - 455391 + | hypothetical protein Nham_0415 455709 - 455473 - | hypothetical protein Nham_0416 456898 - 455831 - | glycosyl transferase, group 1 TERM 459 456112 - 456059 - G 76 -15.3 -2.52676 | gap 1 GATTTCGGCAACCGA GCCGCGATTGTAGGCGATGACGGGCG TTC CGCACGCCATCGCCT-CGATCATGAC GAGGCCGAACGGTTC TERM 460 457260 - 457278 + G 81 -2.3 -5.1101 | overlap 457260 457263 TGCCGCCAGCGATCG GCGTCGC ATGTC GCGATTC TTTTTTGCGTCGTGG TERM 461 457263 - 457275 + G 74 -4.8 -4.64763 | overlap 457260 457260 CGCCAGCGATCGGCG TCGC ATGTC GCGA TTCTTTTTTGCGTCG TERM 462 458220 - 458210 - g 74 -4.6 -4.56597 | overlap 458212 GCCGTTGCGGAAAAA CGGC GCG GCCA TCGCGTTCAACAACG Nham_0417 457191 - 458954 + | ABC transporter related TERM 463 460194 - 460170 - g 71 -13.5 -2.62184 | opp_overlap 460170 GTTCGCGCGATACTA CGGCAGCGTCG ATT CGACGCCGCTG TTTGTGCTGCTGGCG TERM 464 460170 - 460194 + G 90 -13.5 -3.99324 | opp_overlap 460170 GTTCGCGCGATACTA CGGCAGCGTCG ATT CGACGCCGCTG TTTGTGCTGCTGGCG Nham_0418 459040 - 461247 + | Amylo-alpha-1,6-glucosidase Nham_0419 461502 - 462011 + | PRC-barrel TERM 465 462766 - 462786 + G 72 -2.6 -4.70659 | gap 1, overlap 462770 462771 462775 GCATCGTCCATCTTC TGCATCAGC GGCC GCTGGT-CA TTTTTGCCTGTACGG Nham_0420 462102 - 463352 + | major facilitator transporter Nham_0421 463732 - 463472 - | hypothetical protein TERM 466 464071 - 464090 + H 72 -5.7 -4.41348 | gap 1, opp_overlap 464058, overlap 464073 CATGGACGGTCATCG TCCTGCCG GCTCG CGGC-GGA TTTGTTTCAGCGAGG TERM 467 465593 - 465628 + G 70 -13.3 -2.87564 | TCCACTTCTCGCAGC GCGTGTCGAACACCG AGGTTG CGTCGTTCGACACGC TCTATCCGACGCTGC Nham_0422 464110 - 465735 + | ferredoxin-dependent glutamate synthase Nham_0423 468067 - 465989 - | carbohydrate-selective porin OprB Nham_0424 469207 - 468389 - | creatininase TERM 468 469349 - 469302 - H 72 -6.5 -4.34402 | gap 3, opp_overlap 469303, overlap 469287 469303 469305 469309 CGCGTCAGATCAAAA TCATAGAGCC---CCGCTTCTGAT TTC ATCAGAAGCGGAAAGGCTCTAGGT TGTCGTGTCCGATTG Nham_0425 469440 - 470465 + | perplasmic binding protein of ABC transporter Nham_0426 470488 - 471294 + | ABC transporter related TERM 469 471376 - 471402 + G 71 -10.8 -3.47078 | overlap 471377 471380 CGGCACGCGTGCTGT TGCCGGTCGC CGTGCTC GCGGCCGGCG TTCTGGTGTGGGATC Nham_0427 471291 - 472130 + | binding-protein-dependent transport systems inner membrane component TERM 470 472457 - 472501 + G 70 -12.2 -3.14211 | gap 1, opp_overlap 472436 472434 472432 GTCCTGACCGAGGAG GTCGCG-GACGTCGCAATCGG CCTG CTGATCGCGACGTTGCGCGAA TTCGTCAAGGCGGAT Nham_0428 472130 - 473113 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Nham_0429 473115 - 473837 + | hypothetical protein radC 474657 - 473893 - | DNA repair protein RadC TERM 471 474737 - 474750 + r 75 -9.5 -3.89614 | GGGCTCGAGGTTCAG CCGCC GTAG GGCGG TTTGTCGAGCTTGCG Nham_0431 475557 - 474733 - | methionine aminopeptidase, type I Nham_0432 475782 - 477575 + | potassium/proton antiporter Nham_0433 478249 - 477584 - | molybdate ABC transporter ATP-binding protein modB 478947 - 478252 - | molybdate ABC transporter permease protein TERM 472 479028 - 479014 - R 74 -11.4 -3.63515 | GCCGATTTTCAAGAA CGACGC GTA GCGTCG TCCCGGTAGCGACGG TERM 473 479045 - 479103 + r 76 -12.3 -3.35813 | gap 1, opp_overlap 479049 479050, overlap 479046 479049 CCCGGTAGCGACGGA GCAATTGCCC-CATACTTCCCTCCCCCG CTTG CGGGGGAGGGAAGGAAGCGGGCCCTGGA TTGCTTCGCGTCACG TERM 474 479046 - 479102 + r 84 -15.8 -2.61274 | gap 1, opp_overlap 479049 479050, overlap 479045 479049 CCGGTAGCGACGGAG CAATTGCCC-CATACTTCCCTCCCCCG CTTG CGGGGGAGGGAAGGAAGCGGGCCCTGG ATTGCTTCGCGTCAC TERM 475 479049 - 479099 + r 84 -16.1 -2.60423 | gap 1, opp_overlap 479049 479050, overlap 479046 479045 GTAGCGACGGAGCAA TTGCCC-CATACTTCCCTCCCCCG CTTG CGGGGGAGGGAAGGAAGCGGGCCC TGGATTGCTTCGCGT TERM 476 479099 - 479049 - R 89 -16.1 -3.18912 | gap 1, opp_overlap 479046 479045 479049, overlap 479050 GTAGCGACGGAGCAA TTGCCC-CATACTTCCCTCCCCCG CTTG CGGGGGAGGGAAGGAAGCGGGCCC TGGATTGCTTCGCGT TERM 477 479098 - 479050 - R 95 -19.6 -2.51133 | gap 1, opp_overlap 479049 479046 479045, overlap 479049 TAGCGACGGAGCAAT TGCCC-CATACTTCCCTCCCCCG CTTG CGGGGGAGGGAAGGAAGCGGGCC CTGGATTGCTTCGCG Nham_0435 479995 - 479171 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 478 480812 - 480800 - R 71 -10.5 -3.53091 | overlap 480786 ATCCCCGCGGCGAAA CGCCG CGT CGGCG AACGGGGATGAGCAA mepA 481908 - 480946 - | penicillin-insensitive murein endopeptidase TERM 479 482080 - 482095 + r 78 -3.2 -5.08824 | CCTTGTGCCTTCTGC TATCGC TTGC GCGCTA TTTTTTCGATGGAGA Nham_0438 484061 - 482229 - | GTP-binding protein LepA Nham_0439 484751 - 484410 - | HPrNtr TERM 480 484448 - 484501 + g 81 -13.8 -3.65046 | gap 2 CGCCGACGAGTTCGG CGATCGCCGCGACCGCCGCCTTGGCC TCGG GGCC--GGTTGCGGACACGGTGATCG TTGTTCCGATCCCCG Nham_0440 485149 - 484748 - | PTS system fructose subfamily IIA component Nham_0441 485806 - 485300 - | HPr kinase TERM 481 485419 - 485406 - G 76 -5.9 -4.59853 | opp_overlap 485410 GGAAGTGGCGAAAAA CCGGC TGCG ACCGG GATTCGGGCCAGTTC Nham_0442 487626 - 485803 - | periplasmic sensor signal transduction histidine kinase TERM 482 486839 - 486816 - G 70 -8 -4.08216 | overlap 486801 486817 TCAGCGCGCCGAAAA TGGTGGCGCG GGGA CGCTCCACCG GAACCGCGACCGAGA TERM 483 487507 - 487486 - G 95 -2.9 -5.76949 | gap 1, overlap 487488 CAGCGTGAAAAAAAA CTGTCCGACG CGG CG-CAGCCAG CCCAGCGGCCGCTGC Nham_0443 488561 - 487860 - | two component transcriptional regulator TERM 484 489117 - 489145 + G 81 -3.8 -4.99435 | CTGAACGCTCACCCA TCGGCGGAATCC TTTGC GGATTTCAACGA TTTTTCGTTCTTCCG Nham_0444 488775 - 489518 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Nham_0445 489699 - 491315 + | phosphoenolpyruvate carboxykinase TERM 485 491370 - 491340 - f 70 -11.9 -2.73159 | opp_overlap 491345, overlap 491345 TCAATTTCTTGAAAT CAAAAGGGCGGCC CGATC AGCCGCCCTTTTT TATCCCGAGTCTTGT TERM 486 491345 - 491365 + F 100 -11.1 -5.24531 | opp_overlap 491340 491345 TTCTTGAAATCAAAA GGGCGGC CCGATCA GCCGCCC TTTTTTATCCCGAGT TERM 487 491365 - 491345 - f 100 -11.8 -4.54727 | opp_overlap 491345, overlap 491340 TTCTTGAAATCAAAA GGGCGGCC CGATC AGCCGCCC TTTTTTATCCCGAGT TERM 488 491495 - 491450 - f 100 -16.5 -5.26875 | gap 1, opp_overlap 491449, overlap 491454 TGCGCAATCAAAAAA TAAGGCTAGAGTCTGATTCAAC GCA GTTGAA-CAGACTCTAGCGCTA AGTCTTGAGCAATGG TERM 489 491491 - 491454 - f 100 -19.5 -3.41857 | gap 1, opp_overlap 491449, overlap 491450 CAATCAAAAAATAAG GCTAGAGTCTGATTCAAC GCA GTTGAA-CAGACTCTAGC GCTAAGTCTTGAGCA TERM 490 492136 - 492106 - g 75 -14.6 -2.73681 | overlap 492135 GACCGAGCTCAACGA GGCGGCGCCGGGCG ATC CGCGCGACACCACC ACGCCGAACGCGATG TERM 491 492282 - 492251 - g 77 -12.8 -3.5393 | opp_overlap 492240, overlap 492240 492237 ACGACCGGCGGCAAA CGCCTGCGCGCCGG TTTG CCGGCCGGCTGGCG TGTCGGCGACAAGAC Nham_0446 491570 - 492463 + | Beta-lactamase Nham_0447 493565 - 492588 - | arginase TERM 492 493129 - 493098 - G 81 -8 -4.41348 | gap 1, opp_overlap 493098, overlap 493102 CTCGCCGCAAACAAA TG-CAGCGGACATGC CGT GCATGTTCGCGGTCA TCGTCGTCAGCGGTG ligD 496162 - 493562 - | ATP-dependent DNA ligase TERM 493 493597 - 493634 + g 86 -8.4 -4.57569 | gap 1, overlap 493600 493604 TCGCAGCGGCCAGCG GACGCGCGGCCTCGTCG TAGCC CGACCAGGCCTTGC-TC TTTTTCAGGAGGTCC TERM 494 493600 - 493632 + g 79 -11.2 -3.90316 | overlap 493597 493604 CAGCGGCCAGCGGAC GCGCGGCCTCGTCG TAGCC CGACCAGGCCTTGC TCTTTTTCAGGAGGT TERM 495 493604 - 493628 + g 73 -11.4 -3.60925 | overlap 493600 493597 GGCCAGCGGACGCGC GGCCTCGTCG TAGCC CGACCAGGCC TTGCTCTTTTTCAGG TERM 496 494924 - 494934 + g 84 -8.2 -4.4261 | GATCACCACCTCATG GCCG GCG CGGC TTTTGCTCTTGAGCC TERM 497 494959 - 494989 + g 76 -8.2 -4.15565 | gap 1 TGAGCCAGCTTCCGC CGCGGCCGGCGCG ATAGGG CTCGTCGGCC-CG TTTTGAGATGATGCC Nham_0449 496497 - 496168 - | hypothetical protein TERM 498 496209 - 496224 + g 73 -6.8 -4.26903 | gap 1, overlap 496199 496220 496220 GCGCCGCGCGCCTTG CCGCTCG GTT CG-GCGG TTTTCGTAAAGTCGC TERM 499 496319 - 496347 + g 100 -7.4 -5.93252 | gap 2, opp_overlap 496322, overlap 496320 496322 GTGTGCAACGTCCGA ACA-GG-CGCGCGG GTG CCGCGCGGCCATGA TTTTTTCTTTTTGAC TERM 500 496320 - 496346 + g 84 -10.9 -4.13511 | gap 2, opp_overlap 496322, overlap 496319 496322 TGTGCAACGTCCGAA CA-GG-CGCGCGG GTG CCGCGCGGCCATG ATTTTTTCTTTTTGA TERM 501 496342 - 496322 - G 75 -13.9 -3.04322 | opp_overlap 496322 496320 496319 TGCAACGTCCGAACA GGCGCGCGG GTG CCGCGCGGC CATGATTTTTTCTTT TERM 502 496322 - 496343 + g 72 -13.7 -2.73203 | gap 1, opp_overlap 496322, overlap 496320 496319 TGCAACGTCCGAACA GG-CGCGCGG GTG CCGCGCGGCC ATGATTTTTTCTTTT TERM 503 496377 - 496411 + g 72 -4.2 -4.57569 | overlap 496362 CGCCCGCGCTCTTGC GCAGGGCGTCCTTA AGGTCGA TCGGGATGCCGTGC TTTTTCAGAAGATCG Nham_0450 497544 - 496543 - | hypothetical protein TERM 504 497733 - 497747 + r 79 -7 -4.58395 | opp_overlap 497732, overlap 497746 CTGAAAGGATTCAAG CGGCCG GGC CGGGCG TTTTTGCCGGATGCC pyrE 498413 - 497772 - | orotate phosphoribosyltransferase TERM 505 498011 - 498069 + g 72 -4.5 -4.56597 | opp_overlap 498051, overlap 498012 498015 CGAGACCTTCCACCG CCAGCCGCGCGCCGTGCTCCTTCG-GC TTCTTGC GCACGAAGAA-CGCGGCGATCGGTTGA TTTTTCAGCCACGAC Nham_0452 499070 - 498435 - | lysine exporter protein LysE/YggA TERM 506 498490 - 498464 - G 79 -15.9 -2.90723 | TGAGGGCGAACCAGA TGGCGATGGCG GCAAG CGCCACCGCCA GCACGCGCCGGATGG TERM 507 498918 - 498908 - G 71 -8.2 -3.85698 | overlap 498909 CCGCCGCGCCATAAA CGGC GAG GCCG AGCGCGACGCCGATG Nham_0453 502136 - 499092 - | DNA polymerase I TERM 508 500730 - 500753 + g 72 -13.8 -2.70298 | opp_overlap 500732 500734, overlap 500729 500726 500732 AAGGCCGGCGGCGAA CAGACCGGCG CTGT CGCCGGCCTG CTTGTGGTTGAGCGG TERM 509 500751 - 500732 - G 71 -12.8 -3.01712 | opp_overlap 500732 500730 500729 500726, overlap 500734 GGCCGGCGGCGAACA GACCGGCG CTGT CGCCGGCC TGCTTGTGGTTGAGC TERM 510 500973 - 500995 + g 73 -12.7 -3.14229 | gap 1, overlap 500972 500975 500976 AACCGCTTCGAGGCG CGCCGC-GGC GAGG GCCTGCGGCG TCTTGATCGCCGTGT TERM 511 501119 - 501129 + g 90 -8.2 -4.84527 | CTGCTGTGGAAGACG CGCC GCT GGCG TTTTTCCTGTCTGGC TERM 512 501471 - 501509 + g 74 -5.1 -4.57569 | gap 1 CACGCCCGGCACGTT GTCGACGCTGTCGCCGGC CAGT GCCTGC-ACCTCGACGAC TTTTTCCGGCGGTAC TERM 513 502229 - 502249 + r 90 -16.9 -3.27298 | opp_overlap 502217 ATAGGCTTTGAGTCA TCGCCCGGT TTG ACCGGGCGA TTGCTGGTTCCCCGC TERM 514 502324 - 502337 + r 70 -3.7 -4.57073 | overlap 502313 502325 ACTCGGCGGCCTGAA TCGCG GCCG CGCGC TTTTTCGGCGCGATC Nham_0454 503353 - 502307 - | acyltransferase 3 TERM 515 503756 - 503707 - g 83 -7.1 -4.89233 | gap 3, overlap 503709 503712 GACCAAGAGCAAAAA GATCATCGTGCTGGAGCCGCGCCG GATCG CGGCGCG-CGCCAGCGCG--GAGC GGATGGCGAAGACGC TERM 516 503756 - 503709 - g 73 -8.9 -4.05583 | gap 1, overlap 503707 503712 CCAAGAGCAAAAAGA TCATCGTGCTGGAGCCGCGCCG GATCG CGGCGCG-CGCCAGCGCGGAGC GGATGGCGAAGACGC TERM 517 503753 - 503712 - g 75 -13.6 -3.0462 | gap 1, overlap 503707 503709 AGAGCAAAAAGATCA TCGTGCTGGAGCCGCGCCG GATCG CGGCGCG-CGCCAGCGCGG AGCGGATGGCGAAGA Nham_0455 503540 - 506029 + | ATP-dependent helicase HrpB Nham_0456 506119 - 506829 + | MgtC/SapB transporter Nham_0457 506940 - 507467 + | hypothetical protein TERM 518 508802 - 508783 - g 70 -7.8 -4.07687 | ACGCCTTGCCCAAAA CCTGGTCG TCAC CGACCATG TCGCCGCATTGCGCC Nham_0458 507612 - 509111 + | phosphoglucomutase/phosphomannomutase alpha/beta/subunit Nham_0459 509705 - 509196 - | AsnC family transcriptional regulator TERM 519 509343 - 509312 - G 77 -2.2 -5.00616 | gap 1, overlap 509313 GCTTCTTGTAAAAAA GGTCGTAGCTGGCCA TGT CGGCGA-CCACGACG CGCAGCATGTAATCG Nham_0460 510713 - 509787 - | PfkB Nham_0461 511351 - 510935 - | histidine triad (HIT) protein Nham_0462 511693 - 513540 + | DNA polymerase III subunits gamma and tau Nham_0463 513556 - 513876 + | hypothetical protein recR 513959 - 514561 + | recombination protein RecR Nham_0465 515099 - 514689 - | hypothetical protein Nham_0466 515882 - 515115 - | hydroxyacylglutathione hydrolase TERM 520 515917 - 515955 + H 93 -5.5 -5.45802 | gap 2 GAGGTCGAGGCTAGA GCT--ATTCCGACTTTGAT GGA ATCAAAGTCGGGCTCCAGC TTTTTATTTTGGCGC TERM 521 516394 - 516422 + G 78 -15.4 -2.78547 | overlap 516391 GCTTTCGTTGCCGCT GCAGGATGCGGT GGCGG ATCGCATCCTGC TGGTTCATGCGCTGG Nham_0467 516122 - 516862 + | hypothetical protein Nham_0468 517642 - 516920 - | hypothetical protein Nham_0469 519090 - 518137 - | HemK family modification methylase TERM 522 518820 - 518785 - G 74 -14.6 -2.57132 | overlap 518784 CTTCGTTCCGAGAAT GCGCGCCACCGGCTCG CCGG CAAGACGGCGTCGCGC GAAAGCGTCAAGGCA prfA 520260 - 519175 - | peptide chain release factor 1 Nham_0471 522576 - 520309 - | phosphoenolpyruvate-protein phosphotransferase PtsP Nham_0472 524129 - 522876 - | aspartate kinase Nham_0473 524335 - 524802 + | membrane-flanked domain-containing protein Nham_0474 524818 - 525591 + | 3-demethylubiquinone-9 3-methyltransferase TERM 523 526479 - 526497 + G 72 -4.4 -4.58283 | overlap 526480 TCTCGGCCTGTGGCG GCCGTCGA TGG TCGCGGGC TTTTTGGGCGCGTTC Nham_0475 525760 - 526698 + | hypothetical protein Nham_0476 527139 - 526699 - | hypothetical protein TERM 524 526945 - 526923 - G 77 -4 -4.93898 | overlap 526924 ACAGCACGAGAAAAA TCCAGCTCCG GGT CGGAATTGGG CCGGGGTGGCTGAAC Nham_0477 527589 - 527146 - | hypothetical protein TERM 525 527298 - 527314 + g 95 -10.1 -4.57569 | opp_overlap 527294, overlap 527294 527299 CTTTGGGAAATCGCG TGCCGAC GTT GTCGGCG TTTTTCACCAGATGG Nham_0478 527828 - 527586 - | hypothetical protein TERM 526 527632 - 527658 + g 83 -7.9 -4.56597 | gap 1, opp_overlap 527626, overlap 527635 ACCATGAATGCGGGA GCGGCCGCGAGC CTCG GCGTGCGGC-GC TTTTTGGAGCCGGCG Nham_0479 528706 - 527825 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Nham_0480 529571 - 528759 - | phosphoribosyltransferase TERM 527 528938 - 528969 + g 100 -13 -4.58395 | gap 1, overlap 528939 528942 GCTCGGTCGCGATCT TGAACGCGCCCTGCA CAT TGC-GGGCGCGGTCG TTTTTCGACAATCCG TERM 528 528939 - 528968 + g 82 -14.3 -3.34716 | gap 1, overlap 528938 528942 CTCGGTCGCGATCTT GAACGCGCCCTGCA CAT TGC-GGGCGCGGTC GTTTTTCGACAATCC TERM 529 528942 - 528965 + g 74 -14.6 -2.53903 | gap 1, overlap 528939 528938 GGTCGCGATCTTGAA CGCGCCCTGCA CAT TGC-GGGCGCG GTCGTTTTTCGACAA TERM 530 529876 - 529908 + G 74 -9.7 -3.96148 | TTGCTGCGCGTGCGC CAGCGCCGCGCCG CCAAAAT CGGAGCGGTGCCG TTTCTGCTCGACCGC Nham_0481 529735 - 530673 + | methyltransferase Nham_0482 531258 - 530806 - | NUDIX hydrolase argJ 532668 - 531388 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein Nham_0484 533645 - 532719 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 531 533302 - 533324 + g 77 -2.7 -5.06451 | gap 1, opp_overlap 533302 TTGTCCATCAGCAGA CGG-TCGC GGGCGAAG GCGAGCCG TTTTTTGAAGTCCTC TERM 532 534233 - 534244 + G 75 -4.4 -4.74103 | GGCATGATCGGCGCG CTTG CCCG CAAG TTTTTCGGTTCCGCC Nham_0485 534221 - 537076 + | preprotein translocase subunit SecA Nham_0486 538875 - 537367 - | hypothetical protein TERM 533 538789 - 538771 - G 81 -10.2 -4.16016 | GCAGCCGGCAAGAAA CGCGCCGG ACG CCAGCACG GCCGACATCATGACC Nham_0487 540038 - 539076 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 534 539670 - 539681 + g 80 -5.8 -4.7254 | overlap 539661 539652 CTTCAGCCGGCTCTC GGTG GTTG CACC TTTTTCCTGGCCGAT Nham_0488 541209 - 540250 - | tyrosine recombinase XerD TERM 535 540782 - 540806 + g 75 -12.1 -3.65199 | opp_overlap 540763 CGCGCGGCGCGCAAT CGCCGGGCG GGTGAGG CGTCCGGCG TTTCCATCGCGGCTT Nham_0489 541372 - 541226 - | hypothetical protein TERM 536 541711 - 541750 + G 80 -14.2 -3.11955 | gap 1, overlap 541737 CGGCCGGTGCCGGCA CACCCACGGAG-GCCGCGA TCG TCGCGGCGCTCGGCGGGCG TTCGCTGGTGCTTGT TERM 537 542028 - 542005 - g 78 -15.2 -2.78384 | TGCTGCGCGAGGAGA CCCGCGCGCG CATC CGCGAGCGGG CGATCTCGATCTGGC Nham_0490 541674 - 542348 + | shikimate kinase Nham_0491 542345 - 543496 + | 3-dehydroquinate synthase TERM 538 543562 - 543591 + F 74 -7.1 -4.35524 | opp_overlap 543561 543564, overlap 543563 543564 ACTTCGGAATCTAAC GACCACTAGCAAC ATAA GTTGCTGGTGGAG TTTTGAATTTGACAC TERM 539 543564 - 543589 + F 78 -14.1 -2.52017 | opp_overlap 543564 543561, overlap 543563 543562 TTCGGAATCTAACGA CCACTAGCAAC ATAA GTTGCTGGTGG AGTTTTGAATTTGAC TERM 540 543589 - 543564 - f 70 -11.9 -2.78712 | opp_overlap 543563 543562 543564, overlap 543561 TTCGGAATCTAACGA CCACTAGCAAC ATAA GTTGCTGGTGG AGTTTTGAATTTGAC Nham_0492 543685 - 545037 + | hypothetical protein Nham_0493 545530 - 545201 - | type IV pilus assembly PilZ Nham_0494 546667 - 545534 - | hypothetical protein TERM 541 546502 - 546530 + g 71 -5.1 -4.4078 | opp_overlap 546520, overlap 546505 GCTCCGTGAGCCGGA CGAGGACGTCGTC GAA GACGCCGATCTGG TTTTCGTTGAGCCGG TERM 542 546695 - 546719 + r 74 -7.9 -4.13767 | gap 1, overlap 546689 546692 AGTCAAATCCGAGCG CGCGTAACGC TTCGTT GCGTT-CGCG TTTTGCCGTAACGGC Nham_0495 547322 - 547026 - | BolA-like protein Nham_0496 547407 - 548063 + | heat shock protein DnaJ-like Nham_0497 548793 - 548074 - | hypothetical protein TERM 543 548430 - 548414 - G 87 -5.7 -5.12617 | TAACGATTGAAAAAA GCCTCGC TTT GCGCGAC CACGCCGGGATAGCG TERM 544 549924 - 549947 + G 79 -8.8 -4.37886 | gap 1, opp_overlap 549924 AACAAGTGCGACGAA CTCGAGCGCCC GCT GGTCGC-CGAG TTTTATCAGCGCTGC Nham_0498 549012 - 550010 + | cobalt chelatase, pCobS small subunit TERM 545 550020 - 550064 + F 84 -16.4 -2.52464 | gap 1, opp_overlap 550042 AGCTGAGTTTATCTT CGCTCTCCC-CCAGGCGCAGC AACT GCTGCGCAGGGTGGGAGAGGG TGCCTTCGCGAAGCG Nham_0499 550159 - 552096 + | cobalt chelatase, pCobT subunit TERM 546 552287 - 552307 + F 91 -12.6 -4.07885 | opp_overlap 552269 552296 ATGGCCGGGACATCT GCGCGAAG ACGCG CTTCGCGC TTTTGCCCGGCCATG TERM 547 552467 - 552500 + G 84 -16.7 -2.99471 | opp_overlap 552454 552466 552486 552487 CACCCGCGGAAGCAG CCGGCGCCGGACG AACTAACG CCTCCGGCGCCGG TGTCTATCACCGTCA Nham_0500 552344 - 553423 + | hypothetical protein TERM 548 553431 - 553458 + F 71 -10.4 -3.53444 | overlap 553432 AGGATTGACGCGGCG GCGGCCTCGTGC GTCC GCGCGCGGCCGG TTTCGGGACCGATCC TERM 549 553432 - 553457 + F 76 -13.9 -2.71924 | overlap 553431 GGATTGACGCGGCGG CGGCCTCGTGC GTCC GCGCGCGGCCG GTTTCGGGACCGATC Nham_0501 553559 - 554440 + | patatin TERM 550 554533 - 554511 - T 77 -7.6 -4.39859 | ACAAATAACAAATAA GGACGTGCGT CAG ACGCACCGCC AGCACTACCAAAAGT TERM 551 554579 - 554552 - T 78 -9.1 -4.24384 | gap 1, opp_overlap 554552, overlap 554547 ACTACCAAAAGTAAA GGCCGGGTTCGG GGTGT CCGATC-CGGCC TTGCTGTTCTCGGTG TERM 552 554552 - 554579 + T 76 -12 -3.42459 | gap 1, opp_overlap 554547 554552 ACTACCAAAAGTAAA GGCCGGGTTCGGG GTG TCCGA-TCCGGCC TTGCTGTTCTCGGTG rpmB 554926 - 554633 - | 50S ribosomal protein L28 Nham_0503 555422 - 556282 + | hypothetical protein TERM 553 557141 - 557153 + G 76 -9.1 -4.07568 | opp_overlap 557122 ACAGCCGCGCCGCAC CGCGA TCG TCGCG TTTTCGGCGGACGAA TERM 554 558285 - 558267 - g 78 -6.7 -4.56597 | gap 1, opp_overlap 558267, overlap 558251 558268 558269 GCGCGCGCCGAAAAA CTGTCCGG CGCA CCGGAC-G ATCAGTTCGTGCTGA TERM 555 558971 - 558945 - g 72 -3.7 -4.56597 | gap 2, opp_overlap 558929 558944 558945, overlap 558946 GCGCCCGGCGAAAAA CCGGCCGGCGCAT TCG ATG-GCCG-CGGG TTCGTCGTGACCCAG TERM 556 558996 - 559021 + G 79 -9.7 -4.20084 | gap 1, opp_overlap 558996 ACCCAGGCCATGACA TCGCTCGCAGGC ACC GCCGGCGAG-GA TTTTGCCTCCATCCT TERM 557 559090 - 559122 + G 71 -11.1 -3.53012 | opp_overlap 559090 559121 CGCCCGTTACAGAGA CCGGTCCTGCGCCGG ATG CCGCCGCGGAAACGG TTTCCGCCGAAGCGC Nham_0504 556605 - 560027 + | helicase-like Nham_0505 560106 - 560381 + | RNA-binding S4 TERM 558 560409 - 560421 + F 84 -2.6 -5.45802 | opp_overlap 560404, overlap 560405 560404 TCTGACGGAATCAAA GCCG CGCTC TGGC TTTTTGTTTTGACGC TERM 559 560880 - 560869 - g 74 -2.2 -4.87665 | gap 1, overlap 560870 560872 560873 CCTTACGCAGAAAAA GGACG CTC CG-CC GGACGCCAAGGAATT Nham_0506 560618 - 560956 + | 4Fe-4S ferredoxin, iron-sulfur binding TERM 560 561052 - 561036 - f 80 -10.8 -4.08216 | opp_overlap 561034 561036 CCAGGGTCGCCAAAA GCCCGC CGTCC GCGGGC TGTTGGGTATAAATC Nham_0507 561346 - 562125 + | CarD family transcriptional regulator TERM 561 562155 - 562174 + T 100 -12.8 -4.82667 | opp_overlap 562155 ACAAAGGACAAAAAA GCCCGGCC GAAA GGCTGGGC TTTTTGCTGTCGTCG TERM 562 562174 - 562155 - T 100 -10.6 -5.43621 | opp_overlap 562155 ACAAAGGACAAAAAA GCCCGGCC GAAA GGCTGGGC TTTTTGCTGTCGTCG TERM 563 562330 - 562280 - T 100 -21.4 -3.21099 | opp_overlap 562280 562282, overlap 562281 TTCGTTGACCAGCAA GCCTGGAGCTATTCCGGCTTTGAT TCC ATCAAAGTCGGAATAGCTCCAGTT TCTAATGCGTTTTCT TERM 564 562329 - 562281 - T 100 -24.9 -2.52516 | opp_overlap 562280 562282, overlap 562280 TCGTTGACCAGCAAG CCTGGAGCTATTCCGGCTTTGAT TCC ATCAAAGTCGGAATAGCTCCAGT TTCTAATGCGTTTTC TERM 565 562282 - 562328 + T 100 -30.6 -4.01078 | opp_overlap 562281 562280, overlap 562280 CGTTGACCAGCAAGC CTGGAGCTATTCCGGCTTTGAT TCC ATCAAAGTCGGAATAGCTCCAG TTTCTAATGCGTTTT Nham_0508 563917 - 562424 - | peptidase M48, Ste24p TERM 566 562646 - 562662 + g 76 -11.5 -3.72009 | CGAGGCGACCGTTTC GCGGGCG TTG CGCTCGC TTTCCGTCGTCTTGT TERM 567 563360 - 563330 - G 70 -7.6 -4.07568 | gap 1 CTGGGCGCGCGAAAA GCTCGCCAGCGTC AGTTTG GACT-TGGCGAGC GCCAGCGCCGTCAAA Nham_0509 564861 - 564040 - | nuclease (SNase-like) Nham_0510 565139 - 564861 - | transglycosylase-associated protein TERM 568 564934 - 564920 - G 76 -7.8 -4.34402 | overlap 564921 564923 TGTTCCAGATGAAAA GCACGA CTA TCGCGC CGATGGTCGAGGTGA Nham_0511 565807 - 565226 - | hypothetical protein TERM 569 565389 - 565412 + g 75 -11.8 -3.67597 | gap 1, overlap 565393 GCACCGAGCGCGTCG GCGAGATCGCG CGG CGCGATCT-GC TTGTTCGGTCCCGGA Nham_0512 567696 - 566587 - | transposase, IS4 TERM 570 568074 - 568051 - R 87 -8.1 -4.86731 | opp_overlap 568035 TTCGCGTAAAGAAAA CGCGCGCAT TGATAC ATGGGCGCG CACTCAAACGCAAAA TERM 571 568273 - 568232 - R 83 -5.7 -5.00616 | opp_overlap 568267, overlap 568234 GCCGCCGCCAAAAAA GGGTGGGACCGCCGG ACGCGATAATAA CCGGCGGTCCCGTGC CGCGTCATTGAAATC Nham_0513 569741 - 568605 - | hypothetical protein TERM 572 569111 - 569121 + g 74 -4.6 -4.57073 | overlap 569096 569095 CCCCGGCCTTGGAGA GGTC GGC GGCC TTTTTCCAGCGGGTC TERM 573 569501 - 569559 + g 100 -9.7 -5.06414 | gap 3, overlap 569500 CGCCGACCAGCGCCT CGTCGAGCGAGCC-CTTGGCGAT-CTCC TCCGAC GGAGTGTCGCCGAGCGGATCG-TCGCCG TTTTTCTTCAGCGGC TERM 574 569930 - 569960 + H 100 -13.2 -4.56597 | overlap 569934 CGGCTATAAGTCCCG TAACCGGCGCGGGG ATT CCCAGCGCCGCTTG TTTTTGCGCGGCCGG TERM 575 569934 - 569956 + H 89 -16.2 -3.23855 | overlap 569930 TATAAGTCCCGTAAC CGGCGCGGGG ATT CCCAGCGCCG CTTGTTTTTGCGCGG TERM 576 570112 - 570086 - H 75 -4.3 -4.75372 | gap 1, overlap 570087 570088 ACGACTGACCAAAAA GCCGGTC-CGGA CCTG TCCGAGGCCGGG ATCGAACACGAAGGA TERM 577 570165 - 570155 - g 79 -8.2 -4.2828 | TCGCAGTCATCAAAA CCGG CGG CCGG CAATACCGCGTCGTT rplU 570136 - 570522 + | 50S ribosomal protein L21 rpmA 570645 - 570917 + | 50S ribosomal protein L27 TERM 578 570979 - 571001 + F 100 -14.8 -4.72556 | CATCGAGGCTCCACG GGGAGGCGGG AAA CCGGCCTCCC TTTTATAGTTTTTGC Nham_0516 571059 - 571661 + | GCN5-related N-acetyltransferase TERM 579 572787 - 572761 - g 74 -10 -3.68302 | opp_overlap 572781 CGAAGACCTGAAGAA GCAGCGCGATCG CCT CAAGCGCGCGGC GAACAAGATGCCGCT obgE 571889 - 572965 + | GTPase ObgE TERM 580 573063 - 573091 + F 100 -17.5 -3.86283 | overlap 573078 ATTCCGCTTTCCACG GCGCCGCATTCAT GTG ATGAAAGCGGCGC TTTCGTCTCGATTGA Nham_0518 573119 - 574258 + | gamma-glutamyl kinase TERM 581 574250 - 574265 + T 77 -11.8 -3.52652 | overlap 574254 574256 574258 574260 GGGCCGCGCGGCGGT GCCGGC TAGA GCCGGC TTCTGATTGAATCAG TERM 582 574254 - 574295 + T 83 -13.9 -3.60151 | gap 1, overlap 574250 574256 574258 574260 CGCGCGGCGGTGCCG GC-TAGAGCCGGCTTCTGAT TGA ATCAGAAGCGGGCTCTATGA TTATGATTTGACGCG TERM 583 574256 - 574292 + T 100 -21.1 -2.92144 | overlap 574250 574254 574258 574260 CGCGGCGGTGCCGGC TAGAGCCGGCTTCTGAT TGA ATCAGAAGCGGGCTCTA TGATTATGATTTGAC TERM 584 574258 - 574290 + T 100 -19.3 -3.00601 | overlap 574250 574256 574254 574260 CGGCGGTGCCGGCTA GAGCCGGCTTCTGAT TGA ATCAGAAGCGGGCTC TATGATTATGATTTG TERM 585 574260 - 574288 + T 88 -16.1 -3.04589 | overlap 574250 574258 574256 574254 GCGGTGCCGGCTAGA GCCGGCTTCTGAT TGA ATCAGAAGCGGGC TCTATGATTATGATT Nham_0519 575124 - 574531 - | hypothetical protein TERM 586 574841 - 574819 - G 83 -4.8 -5.00616 | CTGTCTGTCAAAAAA GATCCATGCC ATC AGCACGAACC AGATAACAAGGCCGG TERM 587 575215 - 575201 - H 80 -10 -4.07885 | opp_overlap 575199 575195, overlap 575213 CATGCGCGGGCAAAA CCGTTC GAA GAACGG CGTTGCTCCGTTCGC TERM 588 576372 - 576402 + G 71 -12.6 -3.01712 | TCATTGCCGCGCGCG TGGTCGATGGGGTC GGA GAGGCCATCGACCA TATTCAGCGCCACGG TERM 589 576459 - 576469 + G 71 -8.2 -3.86015 | opp_overlap 576459 CCGACGATTCGAATA CCGC CGC GCGG TTTCTCGACGAGGTG Nham_0520 575369 - 576661 + | gamma-glutamyl phosphate reductase TERM 590 577167 - 577146 - g 73 -8.7 -4.08216 | gap 1 CCATCGCTGGGAAAA CT-GGCAGCG GAT CGCCGCCGAG GTGCCGATCGCGGTG TERM 591 577218 - 577252 + G 80 -14.3 -3.16564 | gap 1 TTTCCGTGCCCTCGC GGCGCCTGCCGCGCAG GCGC TTGCGCGGT-GGCGTC TTCCTGAAGTCGGGG TERM 592 577339 - 577324 - g 71 -9 -3.73775 | CTCACCGGGATGAAA TCGAGG CTGT CCTCGA CCGGGCTGCGGAACC nadD 576748 - 577383 + | nicotinic acid mononucleotide adenylyltransferase Nham_0522 577641 - 578003 + | Iojap-related protein Nham_0523 578129 - 578611 + | hypothetical protein TERM 593 578775 - 578788 + G 71 -5.9 -4.25848 | overlap 578781 578782 TTGTCATCTCGGCTT GCCTG CTCG CGGGC TTTTCATCCGCGGTT TERM 594 579156 - 579174 + G 81 -13.1 -3.78775 | CCTTGCAGCGCGTCG GCCGGCG CACGC CGCCGGC TTTGCTGGTGCGGCC Nham_0524 578648 - 580057 + | peptidase M23B TERM 595 581379 - 581337 - g 100 -22 -3.16564 | TCTGCACGGCATCAA GGTCAACGCCTCGTCGCCGG CCC CCGGCGACAAGGCGGCGATC GAGAAGCCCGCGAAA Nham_0525 580054 - 581409 + | carboxyl-terminal protease TERM 596 581427 - 581457 + F 100 -21.2 -4.25283 | opp_overlap 581416, overlap 581428 TAAGTCGGGTTTTCC GGAACCGGGCGTCC TTT GGACGCCCGGTTCG TTTTCATGCCGAGGT TERM 597 581428 - 581456 + F 100 -24.7 -3.14848 | opp_overlap 581416, overlap 581427 AAGTCGGGTTTTCCG GAACCGGGCGTCC TTT GGACGCCCGGTTC GTTTTCATGCCGAGG TERM 598 581640 - 581658 + G 73 -6.6 -4.26903 | CGGCTCCCCTTCACG CTGCCACA GGC TGCGGCGG TTTTGCTCGGATCAA Nham_0526 581559 - 582764 + | protein of unknown function DUF610, YibQ Nham_0527 582789 - 583328 + | dinucleoside polyphosphate hydrolase Nham_0528 584032 - 583625 - | F0F1 ATP synthase subunit epsilon TERM 599 584129 - 584170 + r 100 -19.7 -4.54727 | gap 1, opp_overlap 584133 584135, overlap 584130 584131 TCGCTATTTCGCTGA AC-TAGAGCCCGCTTCTGAT AGA ATCAGAAGCGGGCTCTATGA TTTTGATTTGACGCG TERM 600 584130 - 584169 + r 100 -23.2 -3.32354 | gap 1, opp_overlap 584133 584135, overlap 584129 584131 CGCTATTTCGCTGAA C-TAGAGCCCGCTTCTGAT AGA ATCAGAAGCGGGCTCTATG ATTTTGATTTGACGC TERM 601 584131 - 584167 + r 100 -26.9 -3.22314 | opp_overlap 584133 584135, overlap 584130 584129 GCTATTTCGCTGAAC TAGAGCCCGCTTCTGAT AGA ATCAGAAGCGGGCTCTA TGATTTTGATTTGAC TERM 602 584165 - 584133 - R 100 -25.1 -2.71144 | opp_overlap 584131 584130 584129, overlap 584135 TATTTCGCTGAACTA GAGCCCGCTTCTGAT AGA ATCAGAAGCGGGCTC TATGATTTTGATTTG TERM 603 584163 - 584135 - R 100 -21.9 -2.90075 | opp_overlap 584131 584130 584129, overlap 584133 TTTCGCTGAACTAGA GCCCGCTTCTGAT AGA ATCAGAAGCGGGC TCTATGATTTTGATT Nham_0529 585682 - 584252 - | F0F1 ATP synthase subunit beta Nham_0530 586170 - 585766 - | OsmC-like protein TERM 604 586111 - 586153 + g 73 -12.7 -3.16564 | gap 2, overlap 586119 586121 TGCCAGCCCACCGCC GTCGAGGACG-GC-GCGGCCG TTG CGGCCGCCGCTCGTTGTCGCC TTCGTGACGTAAGCC TERM 605 586119 - 586145 + g 72 -12.3 -3.37464 | gap 2, overlap 586111 586121 CACCGCCGTCGAGGA CG-GC-GCGGCCG TTG CGGCCGCCGCTCG TTGTCGCCTTCGTGA TERM 606 586121 - 586142 + g 74 -13.7 -2.84794 | gap 1, overlap 586119 586111 CCGCCGTCGAGGACG GC-GCGGCCG TTG CGGCCGCCGC TCGTTGTCGCCTTCG Nham_0531 587063 - 586185 - | F0F1 ATP synthase subunit gamma TERM 607 586323 - 586341 + g 81 -10.2 -4.17048 | overlap 586300 CATGGCGCTCATCTG CGCGCCGT AGA ACGACGCG TTGTTTTCCAGAAGG TERM 608 586392 - 586425 + g 73 -12.5 -3.13403 | gap 1, opp_overlap 586394, overlap 586390 586394 AAGGTTGCGCGGAAG C-AGCCGGGTGAGGAT TTC ATCCTCCTCCGGCTCG TATTCGTAGAACGGC TERM 609 586394 - 586422 + g 78 -15.3 -2.77523 | opp_overlap 586394, overlap 586392 586390 GGTTGCGCGGAAGCA GCCGGGTGAGGAT TTC ATCCTCCTCCGGC TCGTATTCGTAGAAC TERM 610 586642 - 586615 - G 74 -9.9 -3.76224 | gap 1, opp_overlap 586614 586634, overlap 586616 TCGGCATTGACGAAA CCGAGCTGGCGC ACGGA GCGC-AGCTCGA CGTTCTCGACGATCT TERM 611 586634 - 586659 + g 73 -8.9 -4.09685 | opp_overlap 586616 586615, overlap 586614 GCTGGCGCACGGAGC GCAGCTCGACG TTCT CGACGATCTGC TTTTCGAAAGTGCGG Nham_0532 588748 - 587216 - | F0F1 ATP synthase subunit alpha TERM 612 588554 - 588526 - G 70 -7.3 -4.07568 | opp_overlap 588534, overlap 588529 GGTCGGCGCCGAAAA TCACGATACCGAC GTT GTCGGTTTCGAGG TTCAGCGCCATGCCG Nham_0533 589371 - 588748 - | F0F1 ATP synthase subunit delta TERM 613 589714 - 589726 + H 75 -5.5 -4.67048 | TGAATGATTACCGAT GCCGT GAC ATGGC TTTCTTTTACAGTAC TERM 614 590002 - 590028 + G 71 -5 -4.4078 | TAATCCGGCCGCGTA CGGTGGCCGC CGTGATC GCCGCAACCG TTTTGATTGCGGGGA Nham_0534 589953 - 590462 + | rare lipoprotein A Nham_0535 592779 - 590563 - | primosome assembly protein PriA TERM 615 591574 - 591547 - G 70 -10.5 -3.60798 | gap 1, opp_overlap 591569, overlap 591544 ACGCGGAGAAATGAA GCGGCCGCGCGG CGGTC CCTCGCGGC-GC AGATCGATCACCTCG TERM 616 592127 - 592096 - G 70 -11.6 -3.14344 | gap 1, opp_overlap 592102 GACGCCGTCGAGCAA CGC-GACGTGGAACG TGC CGTTCGACGCCAGCG CGCGCATGGCGTCCA TERM 617 592267 - 592284 + g 76 -9.8 -3.9122 | GAGGCCGTCGACCAC GCCGGC ACTGAC GCCGGC TTCTTTCGCCGCATC xerC 592949 - 593851 + | site-specific tyrosine recombinase XerC Nham_0537 595310 - 593868 - | dihydrolipoamide dehydrogenase TERM 618 595134 - 595167 + g 77 -3.7 -4.82901 | gap 1, overlap 595135 CTTCGAAGGCATGCA GCCGACATTGAGGCAG GTG CCGCC-CAGCGTCGGG TTTTTCTCGACCACC Nham_0538 595787 - 595344 - | hypothetical protein Nham_0539 595949 - 595788 - | hypothetical protein Nham_0540 596446 - 595946 - | hypothetical protein Nham_0541 597709 - 596468 - | dihydrolipoamide acetyltransferase kgd 600819 - 597850 - | alpha-ketoglutarate decarboxylase Nham_0543 601839 - 600955 - | succinyl-CoA synthetase, alpha subunit sucC 603180 - 601987 - | succinyl-CoA synthetase subunit beta Nham_0545 604278 - 603310 - | malate dehydrogenase Nham_0546 605612 - 604428 - | AFG1-like ATPase Nham_0547 606222 - 605686 - | 2',5' RNA ligase TERM 619 605941 - 605982 + g 72 -7.8 -4.15044 | gap 1 GCCCTGCAATTCGAC CAGCGGGCCGCTCGGCTCC ACCGA GGCGACGA-CGGCGCGCGG TTTCTTGCCGCCGAA Nham_0548 607065 - 606382 - | lipolytic enzyme, G-D-S-L TERM 620 607483 - 607471 - g 74 -10.5 -3.76224 | overlap 607472 TGTCGACGCATCAAA GCGCG CCG CGCGC GAACTGGAGACTGTG Nham_0549 607262 - 607786 + | ABC transporter related TERM 621 609469 - 609497 + G 90 -8.8 -4.93877 | gap 1, overlap 609470 609470 TGCGGCGGCAATTCC TGGCGGCGC-TGC CGGA GCGCGCGCCGTCG TTTTATTTCATCGAC TERM 622 609470 - 609496 + G 70 -10.1 -3.55603 | gap 1, overlap 609470 609469 GCGGCGGCAATTCCT GGCGGCGC-TGC CGGA GCGCGCGCCGTC GTTTTATTTCATCGA Nham_0550 607908 - 610484 + | hypothetical protein TERM 623 610846 - 610895 + G 79 -15.7 -2.94416 | gap 1, overlap 610845 CATCTCCGTTTGGCC GGGCCGCAGGGCG-CGTTGATCGC GCG GCCGTCGACGCCGGTCTGCGGTCC TATATGCTCAAGATC Nham_0551 610806 - 611621 + | hypothetical protein TERM 624 611701 - 611720 + F 100 -16.4 -5.38054 | GATCTGACACGCGAA GCCCCGGC CAAG GCCGGGGC TTTTTCTTTGTGCCC TERM 625 611822 - 611851 + G 73 -12.9 -3.1355 | gap 1, overlap 611815 611823 ATCCTGATGCCCGTC GCCGCCGGGCTGTA TTG TA-AGCCCGGCGAC TTCCATATCGATCCG Nham_0552 611792 - 612835 + | hypothetical protein TERM 626 613135 - 613103 - g 85 -15.5 -3.53444 | TGATGTGGCCGCAAA CTCCCTTCCCCCCGC GAA GCAGCGGGGAGGGAG AAAAGAGCTGCCACA TERM 627 613862 - 613889 + G 73 -7 -4.37092 | gap 1, overlap 613857 TGCGCGAGTTGCCGT TCGACGA-CCGGC GGC GACGGCTCGTTGA TTTTATCGCAGCGCT Nham_0553 612832 - 614517 + | ATP-dependent DNA ligase Nham_0554 614621 - 614926 + | hypothetical protein Nham_0555 616187 - 615093 - | dihydroorotate dehydrogenase 2 Nham_0556 616579 - 616184 - | hypothetical protein TERM 628 616869 - 616851 - g 76 -10.2 -3.85698 | GGGCCTTGCGAGAAA GGCCGGGC TCG ACCCGACC ACCTTCAACAAATCG TERM 629 617010 - 617055 + G 72 -11.7 -3.35597 | gap 1, opp_overlap 616997, overlap 617006 617008 617041 TACGGCGCGCGCGAC GCAGGCGGTGCCGCTGCTCGGT TTC GCCGAG-GCCGGCGCCGGCGGC TATTTCGACGATGGC Nham_0557 616762 - 617394 + | putative phage repressor TERM 630 617436 - 617395 - T 86 -15.9 -2.75064 | opp_overlap 617392 617391, overlap 617392 TGGGCGAGCCAATGA CCTCTTCTTCTCTCTCCCG CTTG CGGGAGAGAGAAGAGCCGG CGCGATTTTGAGCGA Nham_0558 619416 - 617458 - | acetyl-CoA synthetase Nham_0559 620244 - 619831 - | hypothetical protein gpsA 621227 - 620247 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 631 620378 - 620428 + g 83 -14.8 -3.53012 | gap 3, opp_overlap 620359, overlap 620377 CCGCCGCCAGTTCGA GCAGCGCCGGCGCGGTGAACGC-GC CTTC GCTGAGTTTGCCGCGC-GGCGC-GC TTTCGCCACGCCCGA TERM 632 620636 - 620655 + g 74 -4.8 -4.56597 | overlap 620653 TGCCGACCACGATTC CGGCCGCG ATCG CGAGGACG TTTTTCGCGGCGCCG TERM 633 621166 - 621134 - G 74 -14.1 -2.87132 | CGTCGCGCGCATACA GCGTCACCTCGCG TCCCGCG CGCGCGGCGACGC CGGCCAGCGCCGTGC Nham_0561 622314 - 621241 - | O-sialoglycoprotein endopeptidase TERM 634 623263 - 623284 + G 76 -13.7 -3.14132 | gap 1, opp_overlap 623249 ACCACGCGCGAAGGC GCGCGCGCGG ATG CCGC-CGCGC TTGGTGCGGACGCGG hemC 622408 - 623358 + | porphobilinogen deaminase Nham_0563 623362 - 624108 + | uroporphyrinogen III synthase HEM4 Nham_0564 624195 - 625535 + | hypothetical protein TERM 635 626681 - 626655 - g 71 -10.8 -3.45776 | overlap 626646 CGAAATCGAGCACAA CGAGCACGGC GATAGCG GCCGCGCCCG CGCCTGGACGCTGCG TERM 636 626819 - 626856 + G 73 -8.4 -4.07885 | gap 1, overlap 626806 AGGCTCCGCTGGCGG CGCTGCCTTCGAGCAGG CCCGC CCTGGTCGA-GGCGGAG TTTTCGGACCAGATC Nham_0565 625543 - 627201 + | HemY-like Nham_0566 627567 - 627821 + | YcfA-like Nham_0567 627800 - 628192 + | hypothetical protein Nham_0568 629872 - 628229 - | recombinase TERM 637 629643 - 629614 - G 83 -14.3 -3.44586 | overlap 629615 629617 AGGAATGGACGATAA TCACGTCGAACGG CGAG CCGTCCGACGTGG CCAAGTCGAGCAGGC TERM 638 629642 - 629615 - G 86 -17.8 -2.6627 | overlap 629614 629617 GGAATGGACGATAAT CACGTCGAACGG CGAG CCGTCCGACGTG GCCAAGTCGAGCAGG TERM 639 629640 - 629617 - G 77 -14.6 -2.87014 | overlap 629615 629614 AATGGACGATAATCA CGTCGAACGG CGAG CCGTCCGACG TGGCCAAGTCGAGCA TERM 640 630176 - 630186 + H 70 -4.6 -4.54727 | AAAGGCATGTCCTCG CTGC CGT GCGG TTTTCATTTGCCGAG Nham_0569 630346 - 630993 + | DNA methylase N-4/N-6 Nham_0570 631822 - 631130 - | hypothetical protein TERM 641 631961 - 631974 + r 100 -9.5 -5.62288 | opp_overlap 631956 TAGAATTCAATGCGA CCCGC TTCG GCGGG TTTTTCTTTTGTTAC TERM 642 632057 - 632018 - R 72 -4.5 -4.65895 | gap 3, opp_overlap 632026, overlap 632024 632026 632027 TCTTTGATTGAAAAA GAACAA-T-ACGC-GGCTCG AAA CGAGCCAGCATGAATTGTCC GCAATGTGCGGCGCT TERM 643 632049 - 632024 - R 72 -6.1 -4.32491 | gap 1, opp_overlap 632026, overlap 632018 632026 632027 ATTGAAAAAGAACAA TACGC-GGCTCG AAA CGAGCCAGCATG AATTGTCCGCAATGT Nham_0571 632664 - 632179 - | hypothetical protein TERM 644 632546 - 632569 + gr 72 -4.4 -4.58283 | overlap 632546 632548 GGTGTGCGGCTCTCA GCCTTCACGG ATTT CCGTGCGGCC TTTTTGGCGAACTTG TERM 645 632636 - 632655 + gr 71 -5.6 -4.29106 | overlap 632637 GCGGCGATTTCCTCA GCCGTCGG TCGC CTGACGGG TTTCTTCATGTCCGC Nham_0572 633307 - 632633 - | cobyrinic acid a,c-diamide synthase TERM 646 633474 - 633454 - R 100 -18.3 -4.36914 | CGGCGCGGCAGAAAA GGCCGGGCT AAA AGCCCGGCC CCGCTGCAAACGAGA Nham_0573 633730 - 633461 - | hypothetical protein TERM 647 633748 - 633738 - H 74 -8.2 -4.13945 | AGGCGCATGCGAAAA GCCC GAG GGGC ATCGCCCGGCCTGCA TERM 648 634048 - 634034 - H 79 -12.8 -3.2244 | opp_overlap 634032, overlap 634029 634027 GATGAGAACATCGAA GCCGGC GTT GCCGGC GCTTCGATAACGGCG TERM 649 634077 - 634059 - H 71 -11.6 -3.28712 | opp_overlap 634060, overlap 634060 CCGGCGCTTCGATAA CGGCGGGC CGC GCCCGCCT TTTCGTGACGAGCGC TERM 650 634060 - 634076 + H 100 -15.1 -4.25104 | opp_overlap 634059 634060 CGGCGCTTCGATAAC GGCGGGC CGC GCCCGCC TTTTCGTGACGAGCG TERM 651 634076 - 634060 - H 81 -15.1 -2.57132 | opp_overlap 634060, overlap 634059 CGGCGCTTCGATAAC GGCGGGC CGC GCCCGCC TTTTCGTGACGAGCG TERM 652 634142 - 634122 - H 74 -2.3 -4.89567 | overlap 634125 TTTCAAAAGAGAAAA GAAGGGGCC TGC GGCCCCAGG GCCGTCAAGACCAAG TERM 653 634139 - 634125 - H 100 -12.8 -4.52747 | overlap 634122 CAAAAGAGAAAAGAA GGGGCC TGC GGCCCC AGGGCCGTCAAGACC Nham_0574 634335 - 635249 + | antirestriction protein TERM 654 635260 - 635234 - f 74 -13.6 -2.70391 | overlap 635236 AGAAAAGGGAGAGGA GAGGGAGGCCGC ATA GCGGCCGCCGTC AGGGCCGGAAATATC TERM 655 635345 - 635320 - f 100 -14.7 -4.13767 | opp_overlap 635321, overlap 635321 CCTGCCAGGGGAAAA TTCGGCGTCCG ATGG CGGACGCCGAT TTGCTTGCAGGGCAA TERM 656 635344 - 635321 - f 100 -18.2 -3.08046 | opp_overlap 635321, overlap 635320 CTGCCAGGGGAAAAT TCGGCGTCCG ATGG CGGACGCCGA TTTGCTTGCAGGGCA TERM 657 635321 - 635344 + F 100 -18.2 -3.90112 | opp_overlap 635321 635320 CTGCCAGGGGAAAAT TCGGCGTCCG ATGG CGGACGCCGA TTTGCTTGCAGGGCA TERM 658 636229 - 636258 + G 71 -9.3 -3.68073 | opp_overlap 636194 636229 636242 TGATCGCTGCGAACA GTGCCGCGATC AATCCCAA GATCGCGGGAC TTCTTCCGTCGCCTA Nham_0575 635520 - 636305 + | hypothetical protein TERM 659 636350 - 636299 - f 91 -6.9 -5.20333 | gap 2, opp_overlap 636320 GATTGACAATAAAAA GAAGTAACCGCCCTAATCATATGTT GTTT AACAT-TGAATAGATCGGT-ACTTC GCATGCTGTTTAAGA Nham_0576 636332 - 636598 + | hypothetical protein TERM 660 636715 - 636685 - f 91 -13.2 -4.03413 | opp_overlap 636683 636702 AGCCTCGTACAGAAA GTTCGGCATCCGCC GCT GGCGAATGCCGCTC GCCTTTCAGAGCGAA TERM 661 637078 - 637060 - g 78 -11.8 -3.727 | opp_overlap 637064 TCGACCAGATGGAAA TCGAGATC ATC GATCTCGA TTACGAGGATTACCA Nham_0577 636807 - 637097 + | plasmid maintenance system killer TERM 662 637152 - 637133 - g 81 -6.3 -4.77438 | opp_overlap 637134, overlap 637134 ACTGAGGATGAAAAA TCCCGCC CACCCC GGCGGGT TCGTCAAGAGCGAGA Nham_0578 637107 - 637433 + | XRE family plasmid maintenance system antidote protein Nham_0579 637677 - 637982 + | XRE family plasmid maintenance system antidote protein TERM 663 638254 - 638270 + G 72 -4.3 -4.58663 | opp_overlap 638250 TGCTCGGAAAAGACG CGATGGG CGG CCAGTCG TTTTTCGGCGGTCCT Nham_0580 638076 - 641291 + | helicase-like TERM 664 641455 - 641488 + G 83 -11.6 -4.07568 | GTTGCAATGGTTCGC CGCCTGCAAGCCGG CGACCA TCGGCGTGCCGGCG TTTTCGGACGACACG Nham_0581 641288 - 642058 + | hypothetical protein TERM 665 642438 - 642414 - g 71 -5.6 -4.386 | opp_overlap 642416 GAAGCTTCTACAAAA GAGCTACGCC GGCAA GGTGAAGCTC ATCTACATCGACCCG TERM 666 642848 - 642830 - g 71 -5.2 -4.46212 | overlap 642832 642837 TTGTCTATTACAAAA CAGAGAAC GGC GCTCTCGG CGAACTCGATAAGGA Nham_0582 642076 - 644058 + | DNA methylase N-4/N-6 TERM 667 645056 - 645036 - T 73 -11.1 -3.35813 | GTTCAGCGCAAGGAA GTCGTCGTC CAG GACGGCGAC GACCTCGAAGACCTG TERM 668 645276 - 645266 - T 83 -8.2 -4.67038 | overlap 645261 CCTGGAAAAGGAAAA GCGC CTC GCGC CTCTCGGCATCAAGA TERM 669 646157 - 646139 - T 73 -3.1 -4.80882 | gap 1 ACTGGACATCAAAAA CGCCGACG ATCG CGT-GACG GTGAAAACCCGCCAG TERM 670 647195 - 647156 - T 79 -13.6 -3.14745 | opp_overlap 647162 647164 647187, overlap 647154 647152 647150 647159 TTTCCATAAGATACA TTATCACACGGCCAGTGT TCTG ACGCTGGCCGTGTGATCT CCACACTTCAGTGGC TERM 671 647192 - 647159 - T 100 -19.7 -2.77433 | opp_overlap 647162 647164 647187, overlap 647156 647154 647152 647150 CCATAAGATACATTA TCACACGGCCAGTGT TCTG ACGCTGGCCGTGTGA TCTCCACACTTCAGT TERM 672 647162 - 647189 + T 87 -17.8 -2.62933 | opp_overlap 647159 647156 647154 647152 647150, overlap 647164 647187 TAAGATACATTATCA CACGGCCAGTGT TCTG ACGCTGGCCGTG TGATCTCCACACTTC TERM 673 647164 - 647187 + T 80 -14.6 -2.8547 | opp_overlap 647159 647156 647154 647152 647150, overlap 647162 AGATACATTATCACA CGGCCAGTGT TCTG ACGCTGGCCG TGTGATCTCCACACT Nham_0584 647715 - 647248 - | hypothetical protein Nham_0585 648411 - 647842 - | resolvase-like protein TERM 674 648279 - 648304 + g 72 -11.7 -3.29829 | opp_overlap 648275, overlap 648280 CCTCGGTAAGACCCT TGCGGCGGGCG GTAG CGCCCGACGCC TTGTCCCGGAATATC TERM 675 648280 - 648303 + g 77 -15.2 -2.57683 | opp_overlap 648275, overlap 648279 CTCGGTAAGACCCTT GCGGCGGGCG GTAG CGCCCGACGC CTTGTCCCGGAATAT Nham_0586 648625 - 648903 + | hypothetical protein TERM 676 651056 - 651033 - gf 71 -10.2 -3.54129 | CAGATCCGGCGGAAA CGGGCCTCAC TATT GCGACGCCCG GAACGGGAGACCAGC Nham_0587 648869 - 652162 + | hypothetical protein Nham_0588 652618 - 652854 + | hypothetical protein TERM 677 652842 - 652863 + F 100 -15.9 -3.96148 | opp_overlap 652845, overlap 652845 TTCCGAGGATCAGGA GAAGGGCGC GTGA GCGCCCTTC TTTCTCCTCCGGAGG TERM 678 652860 - 652845 - f 76 -11.8 -3.45023 | opp_overlap 652842 652845 CGAGGATCAGGAGAA GGGCGC GTGA GCGCCC TTCTTTCTCCTCCGG TERM 679 652845 - 652860 + F 90 -11.8 -4.11183 | opp_overlap 652845, overlap 652842 CGAGGATCAGGAGAA GGGCGC GTGA GCGCCC TTCTTTCTCCTCCGG Nham_0589 652851 - 653096 + | hypothetical protein TERM 680 653106 - 653081 - T 84 -16.1 -2.64616 | TTTCGAGGCAGAGCA CGGGGGCGCGT CATG ACGCGCCCCCT CACCGAACCTGCCAA Nham_0590 653446 - 653153 - | hypothetical protein TERM 681 653369 - 653350 - G 81 -12.8 -3.75332 | opp_overlap 653365 ATTCCGCAATTGAAA GAGGCGCG TTGT CGCGCCCC CTGAGCTTGATCCTG TERM 682 653389 - 653409 + g 71 -4.6 -4.39571 | GCTTGATCCTGAGTG CGTCGGTT TTGGT AGCCGCCG TTTTGCCTTTATCCC Nham_0591 654057 - 653479 - | hypothetical protein TERM 683 653583 - 653600 + g 81 -12.7 -3.68351 | TGGCGGGCGCGCCGC TCGCGGC GGAC GCCGCGA TTTCGGTCATCGGCA Nham_0592 654815 - 654054 - | hypothetical protein Nham_0593 656558 - 654831 - | TRAG protein TERM 684 655047 - 654995 - G 74 -4.8 -4.64676 | gap 3, overlap 654996 654998 CCAGCGCGAAGAAAA TCAGCGCCACGACCG-ACGGC-GGC GGTCCA GCCAGCCATGCGG-CGCAGCGCAGG AACACGCCACACAGC TERM 685 656553 - 656581 + g 81 -16.7 -2.74012 | TGCGATAGTTTCGAG GTCCATGGCCGCA CCA TGCGGCCGTGGCC TCGTTCCGGTCCTGG Nham_0594 657378 - 657731 + | hypothetical protein Nham_0595 658042 - 658419 + | hypothetical protein TERM 686 659555 - 659586 + G 77 -13.1 -3.55444 | opp_overlap 659582 CCGTCACCAGCGGGA GCGCC-TGGTGCTGG ATCG CC-GCACCAAGGCGC TTTCACGCCTGGAGG Nham_0596 658416 - 659858 + | hypothetical protein TERM 687 660041 - 660025 - g 74 -9.4 -3.90766 | overlap 660020 CATCCAGAAATACAA CGACCC CGACT GGGTCG CCGAGATGGTCGGTG Nham_0597 659855 - 660082 + | hypothetical protein Nham_0598 661097 - 660345 - | phage Gp37Gp68 Nham_0599 662214 - 661087 - | hypothetical protein TERM 688 662151 - 662163 + g 71 -9.1 -3.75629 | opp_overlap 662143, overlap 662150 CATAGAAGTACTTCT GCACG ATG CGTGC TTTGACTTCCGACTG TERM 689 662338 - 662325 - H 74 -8.1 -4.14945 | GGAAGAACAAGGAAA GAGCC GTCG GGCTC ACATCAAAGCAGGGT Nham_0600 662441 - 662620 + | hypothetical protein TERM 690 663527 - 663547 + G 73 -6.8 -4.36914 | opp_overlap 663519 663530 GAAGTCAGCGACATG CAAGCCGC CGCAA GCGGATTG TTTTCTACCCCGAAC TERM 691 663807 - 663827 + G 73 -12.5 -3.20573 | overlap 663805 CCTATATTGCCTTCT CGCCGGCGC GTG GCGTTGGCG TCTTCATCTCGATCA Nham_0601 662774 - 663919 + | beta-lactamase/D-alanine carboxypeptidase TERM 692 664014 - 663981 - f 87 -15.3 -3.32844 | overlap 663984 GCGCTTATTCCACAA GAACCCGCCGGCGAT AGTC ACCACCGGCGGATCC CGGCCGGTGACCGCA TERM 693 664011 - 663984 - f 93 -13.4 -3.80733 | overlap 663981 CTTATTCCACAAGAA CCCGCCGGCGAT AGTC ACCACCGGCGGA TCCCGGCCGGTGACC TERM 694 664148 - 664137 - f 91 -7.2 -5.31275 | overlap 664138 CCGGACCACAAAAAA CCCG CCAC CGGG ATCAGTCGGCAGCAG TERM 695 664375 - 664390 + F 90 -11.8 -4.18018 | opp_overlap 664375 GTTCAGCGCCAATAA CCCCGC TCCG GCGGGG TTTTCCATCCCGAGA TERM 696 664390 - 664375 - f 77 -11.8 -3.63515 | opp_overlap 664375 GTTCAGCGCCAATAA CCCCGC TCCG GCGGGG TTTTCCATCCCGAGA Nham_0602 664478 - 664762 + | hypothetical protein TERM 697 664778 - 664801 + T 100 -12.4 -4.90471 | opp_overlap 664777 664776 CACCGGCTTCAAAGC CCCCGTCAGT CCAG GCTGGCGGGG TTTTCTATTTTGGCT Nham_0603 665036 - 664806 - | hypothetical protein TERM 698 664970 - 664980 + g 73 -8.2 -4.07568 | CCGGGATATCGGCTT CGGC CAT GCCG TTTTGACGGCAAACC TERM 699 666219 - 666255 + H 87 -15.1 -3.41693 | opp_overlap 666217 666220, overlap 666220 ATGCGTCTCATAATG ATGGTGCCGCGTGTTCG AGC CACACACGCGGCACCAG TTCCTTCATCGTCCG TERM 700 666254 - 666220 - H 100 -20.8 -2.82623 | opp_overlap 666220 666219, overlap 666217 TGCGTCTCATAATGA TGGTGCCGCGTGTTCG AGC CACACACGCGGCACCA GTTCCTTCATCGTCC TERM 701 666220 - 666254 + H 95 -18.6 -2.64695 | opp_overlap 666217 666220, overlap 666219 TGCGTCTCATAATGA TGGTGCCGCGTGTTCG AGC CACACACGCGGCACCA GTTCCTTCATCGTCC Nham_0604 666361 - 666591 + | hypothetical protein Nham_0605 666725 - 667204 + | hypothetical protein TERM 702 667244 - 667260 + F 75 -9.3 -3.90856 | opp_overlap 667225, overlap 667246 GCTGATCGGCGCGGC GCCGGGC CAA GCCCGTC TTTGCTTCGGACATT TERM 703 667246 - 667258 + F 71 -10.5 -3.54146 | opp_overlap 667225, overlap 667244 TGATCGGCGCGGCGC CGGGC CAA GCCCG TCTTTGCTTCGGACA TERM 704 667356 - 667380 + G 78 -9.9 -4.08767 | AGGTGCTTCCTCCGG CATCGGCGCCG AGC TGGCGCGGGTG TTTTCCGCCCATAAG Nham_0606 667327 - 668097 + | short-chain dehydrogenase/reductase SDR Nham_0607 668688 - 668978 + | protein of unknown function YGGT Nham_0608 668990 - 669310 + | hypothetical protein TERM 705 669727 - 669708 - g 72 -12.1 -3.31144 | opp_overlap 669724 669725, overlap 669709 GCTGCATCCGCACAA CGCCGGC CGCCTC GCCGGCG GCCTGCCCGCATTGT TERM 706 669733 - 669709 - g 74 -14.2 -2.58544 | opp_overlap 669724 669725, overlap 669708 CTGCATCCGCACAAC GCCGGCCGCC TCGCC GGCGGCCTGC CCGCATTGTCGCCAT TERM 707 669894 - 669876 - g 76 -6.6 -4.4078 | GCTGCTCAATGAAAA CGCCACGG TGA CCATCGCG CATTCGCGCTCGCGC Nham_0609 669328 - 670212 + | methylenetetrahydrofolate dehydrogenase (NADP+) Nham_0610 670874 - 670344 - | inorganic pyrophosphatase TERM 708 670920 - 670940 + r 74 -12.6 -2.9518 | overlap 670922 AATACACAGTCGTCA TACGCGGG CTTGA CCCGCGTA TCTATCCATCTTCGG Nham_0611 671628 - 671077 - | GCN5-related N-acetyltransferase TERM 709 671660 - 671675 + r 70 -4.6 -4.52589 | overlap 671662 AAATGTTGTTGCCGA CATCGC CAGT GCGACG TTTTGTATCGAAAAG Nham_0612 672542 - 671772 - | isochorismatase hydrolase Nham_0613 674096 - 672837 - | amine oxidase TERM 710 672970 - 672954 - G 76 -5.8 -4.56597 | overlap 672956 CTCTCCCGCGAAAAA CAGCCG GCCAT CGACTG GCGCCGCGAGCGCGG TERM 711 674125 - 674112 - R 83 -8.1 -4.56978 | GGCGTAAACAACAAA GGACG ATGT CGTCC CCACCACCGGTTCAG Nham_0614 677028 - 674305 - | DNA mismatch repair protein TERM 712 675232 - 675246 + g 70 -7.8 -4.07568 | opp_overlap 675231 CGGGCGGGTGAAATT CTCGTC GGT GGCGAG TTTTGCGAGCGACGC TERM 713 675337 - 675284 - G 70 -10.2 -3.53811 | gap 2 TCCAGTTGCGCGAAA GCGTG-CGCGGCGGC-GCGCAGGTCG TCGC CGGCCTCCACCACCACCGCGGCAAGC CGGTCGAAAATCTCA Nham_0615 678699 - 677143 - | EmrB/QacA family drug resistance transporter Nham_0616 679870 - 678704 - | secretion protein HlyD TERM 714 679327 - 679352 + g 84 -8.4 -4.40561 | gap 1 GCGCGCTGAGGGAGT TGTCGAGATCG AGCTG CGATC-CGACA TTGTTTTTCGCGAGC TERM 715 679781 - 679732 - G 74 -12 -3.45023 | overlap 679765 GCAGCACGACCAGAA GCAGCGGCCGGCGGTAGC-GGCGT ATCG AAGCCAGCAGCCGCCGGC-GCGGC CTGGCAACCGTGGTC Nham_0617 680351 - 679863 - | MarR family transcriptional regulator Nham_0618 680588 - 681079 + | ferric uptake regulator family protein TERM 716 682546 - 682575 + G 70 -12 -3.13403 | opp_overlap 682523, overlap 682554 TCGGCATCTCGCTGC CGGGCACCGGCG AGGCGC CGGCGGCGCCCG TCTTCGTCGACGGCA TERM 717 682554 - 682577 + G 70 -12.4 -3.14132 | gap 1, opp_overlap 682523, overlap 682546 TCGCTGCCGGGCACC GGCGAGGCGCC GGC GGCGCC-CGTC TTCGTCGACGGCAAG ispG 681426 - 682721 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 718 682767 - 682748 - T 93 -12.8 -4.26188 | opp_overlap 682746 682748 682749, overlap 682749 CGGAGAGATCGAAAA CGCCGGCC GCCG GGCCGGCA TCTTATTGTGAGATA TERM 719 682748 - 682767 + T 71 -10.6 -3.48824 | opp_overlap 682748 682749, overlap 682746 682749 CGGAGAGATCGAAAA CGCCGGCC GCCG GGCCGGCA TCTTATTGTGAGATA TERM 720 682749 - 682766 + T 78 -14.1 -2.68813 | opp_overlap 682748 682749, overlap 682748 682746 GGAGAGATCGAAAAC GCCGGCC GCCG GGCCGGC ATCTTATTGTGAGAT TERM 721 682766 - 682749 - T 83 -14.1 -3.15231 | opp_overlap 682749 682748 682746, overlap 682748 GGAGAGATCGAAAAC GCCGGCC GCCG GGCCGGC ATCTTATTGTGAGAT Nham_0621 684406 - 682799 - | Na+/H+ antiporter TERM 722 683915 - 683891 - G 81 -10 -4.1899 | gap 1 GGACGGCAGCGAAAA CGTGCCGGTCG AGAC CG-CCAGCACG GCGAAGCGGTAGAGG Nham_0622 685301 - 684615 - | hypothetical protein TERM 723 685365 - 685335 - R 100 -16 -3.72576 | overlap 685336 CGGTCGGCGACGAAA TGCGCGGCGGCGCG CAG CACGTCGCCGCGCG CGCCGAAGGCCGACA Nham_0623 686236 - 685310 - | polyprenyl synthetase TERM 724 685364 - 685336 - G 93 -19.5 -2.83403 | overlap 685335 GGTCGGCGACGAAAT GCGCGGCGGCGCG CAG CACGTCGCCGCGC GCGCCGAAGGCCGAC TERM 725 686078 - 686054 - G 78 -10.6 -3.99324 | TTCGACCACCAGAAA CGGCCGCAGC CGCTT GCCGCCGCCG AGCGACGAATAGCGC TERM 726 686183 - 686200 + g 70 -7.7 -4.09685 | gap 1 GGTCTCGGTCTCGTC CGCCGTCG TGT CGA-GGCG TTTTACGAAATCGGC mtgA 686485 - 687165 + | monofunctional biosynthetic peptidoglycan transglycosylase TERM 727 687377 - 687360 - g 100 -7.7 -5.29445 | gap 1, overlap 687363 TTCCAAGAAGAAAAA CATCGCCG TCG CGGCG-TG GCATGCGCCGTTCGG rpmF 687338 - 687523 + | 50S ribosomal protein L32 TERM 728 688089 - 688116 + G 74 -10.4 -3.72576 | overlap 688085 GAACTGCGTTTCGAT CCGGCGCCGGTG CCTG CGCCGGCAGCGG TTTCGTCGCCGGCGC TERM 729 688254 - 688305 + G 73 -6.6 -4.33151 | gap 3, overlap 688297 688298 688299 GACATTCCGGCGCCC GGCATCCAGCCCGGGGGCGTGA-CG TCTTC CGATCA-GCCCCGGCGCTAGA-GCC TTTTCGCTTCTGATG Nham_0626 687651 - 688301 + | hypothetical protein Nham_0627 688833 - 688432 - | hypothetical protein TERM 730 688813 - 688855 + g 74 -12.7 -3.28712 | gap 1, opp_overlap 688839 688840, overlap 688852 TTTGCGATTGGCCTC GCAAGGGTCGTGCCGGTC CACATTAA GGCCGGCGCGACCCG-GC TTCTGCGGCGGACAG Nham_0628 688966 - 690744 + | diguanylate cyclase/phosphodiesterase Nham_0629 691240 - 691013 - | hypothetical protein TERM 731 691397 - 691364 - R 73 -10.9 -3.36202 | gap 1, opp_overlap 691365, overlap 691354 691365 AGAGACAGCCCATAA CCGGCCGCGTCGTTAC GTG GCGTCGACGCGGC-GG AATCCGTTCCACATG Nham_0630 692434 - 691376 - | polysaccharide deacetylase TERM 732 691608 - 691575 - G 70 -7.3 -4.07568 | gap 1, overlap 691580 GCCGCCTTGGCAAAA GCGAACTCA-CGCGGC CCC GCAGCGCTGCGGTCGC CGTAAGGGTAGGCCA TERM 733 692675 - 692698 + H 71 -10.2 -3.53224 | CACGATCTTGTCGCC GGTCCGCCGG CGAG CCGGCAGATC TTTCGCGACAGGATA TERM 734 693172 - 693200 + G 70 -12.3 -3.22298 | opp_overlap 693162, overlap 693173 ATTTATCGCGCGGCG CGCCACCGCGGTT CGA GACCGCGGCGGCA TTGCTGATCGGTGAG TERM 735 693173 - 693199 + G 76 -15.8 -2.53164 | opp_overlap 693162, overlap 693172 TTTATCGCGCGGCGC GCCACCGCGGTT CGA GACCGCGGCGGC ATTGCTGATCGGTGA Nham_0631 692718 - 694109 + | OmpA/MotB Nham_0632 694114 - 694440 + | hypothetical protein Nham_0633 694559 - 695614 + | hypothetical protein TERM 736 695696 - 695709 + G 74 -9.5 -3.86935 | CTGGACGGACCGGTT GCGCC GCGC GGCGC TTATTCTGCTGGTTG TERM 737 696317 - 696350 + G 76 -10.1 -3.88291 | gap 1, overlap 696319 CGATACGCTGCAAGG GCCGGCGCGCGACGAC GCC GGCG-CGCGCGACCGC TTTCTCGGCATCATG Nham_0634 695595 - 696947 + | histidine kinase TERM 738 697966 - 697955 - g 81 -7.2 -4.42653 | overlap 697941 697938 697956 AGCCGATCGACAAAA CGGC CTCC GCCG AAGCCATCAAGTTCT Nham_0635 697072 - 698097 + | periplasmic phosphate binding protein TERM 739 698100 - 698141 + F 100 -19.5 -3.80893 | opp_overlap 698074 698093 698094 GATCAAGAGCTGATC TCGGGCCATGGAGGAGCGC GATG GCGCTCCTCCATTCTCCGA TTTGCATTCTCCAGT TERM 740 698282 - 698319 + G 79 -8.6 -4.25104 | gap 2, overlap 698282 GCCGCTATGACCGCA C-CCGTG-CGCTGAAC GCCTTCAA GTTCAGCGACACGGCG TTTTACTGGACCACG TERM 741 698534 - 698563 + G 95 -12.9 -4.25283 | TCATCGCCATGACGA TCGCGATCCCGGT CGGC ATCGGCATCGCGA TTTTCCTCACCGAAT Nham_0636 698224 - 699222 + | phosphate ABC transporter permease Nham_0637 699305 - 700150 + | phosphate ABC transporter permease TERM 742 700587 - 700605 + G 77 -13.8 -3.28924 | opp_overlap 700587 CGATCGGGTGGAGAA GGCGCTGC AGG GCGGCGCC TTGTGGAACGAAGTC TERM 743 700605 - 700587 - g 72 -11.6 -3.29144 | opp_overlap 700587 CGATCGGGTGGAGAA GGCGCTGC AGG GCGGCGCC TTGTGGAACGAAGTC Nham_0638 700147 - 700965 + | phosphate ABC transporter permease Nham_0639 700994 - 701710 + | phosphate uptake regulator, PhoU Nham_0640 701735 - 702436 + | two component transcriptional regulator Nham_0641 703242 - 702736 - | GcrA cell cycle regulator TERM 744 703333 - 703358 + H 83 -14 -3.53012 | gap 1 GAATCCCTTAACCCT CG-CCGGGCGG GAAAA CCGCCCGGGCG TTTACGCCGAGAACA TERM 745 703587 - 703609 + H 100 -16.3 -4.05788 | opp_overlap 703584 703583 703581 CTAGAATAACACTCA CGTGCCGCC GGAAA GGCGGCACG TTTCGTTTCCGGGGC TERM 746 704229 - 704208 - g 77 -13 -3.62046 | opp_overlap 704205 704204 CGAGGCGGTGAAGAA GGCGGTCG GCCCCG CGACCGCC GGCATTCTGATCGAG argD 703690 - 704901 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 747 704913 - 704890 - f 74 -11 -3.53444 | overlap 704886 TCTGCGAAGAAGGAA GCGGCGCAAT GAGC ACTGCGCCAC GGCATTTTCTCGACC TERM 748 705152 - 705194 + G 70 -11.8 -3.20858 | opp_overlap 705166, overlap 705153 705163 705189 CGAAATGCAGCTCGG ACGCGGCGAGACCATCGCGG ATA CCGCGAGGGTGCTGTCGCGC TTCGTCGATATCATC TERM 749 705153 - 705193 + G 76 -15.3 -2.52193 | opp_overlap 705166, overlap 705152 705163 705189 GAAATGCAGCTCGGA CGCGGCGAGACCATCGCGG ATA CCGCGAGGGTGCTGTCGCG CTTCGTCGATATCAT Nham_0643 704898 - 705824 + | ornithine carbamoyltransferase Nham_0644 707997 - 706114 - | GTP-binding protein TypA TERM 750 706273 - 706303 + g 74 -14.7 -2.5007 | overlap 706272 706270 GATCGGCGGCGTCAG CCGCACCGCCTCG TCCTT CGACGTGGTGCGG ATATTGGTGAGTTGC Nham_0645 708998 - 708219 - | CRP/FNR family transcriptional regulator TERM 751 709418 - 709401 - g 87 -5.5 -5.14563 | TCTTCGAGGAAAAAA GCTTTGC TGTC GCCAAGC GGCTGGCCGCGCTGA Nham_0646 709160 - 709579 + | response regulator receiver domain-containing protein TERM 752 709848 - 709831 - T 81 -12.7 -3.54459 | CCAAGGGGTCCTAAA GGCGCGA AGCT TCGCGCC GACACCATCGATAGG Nham_0647 710185 - 709940 - | hypothetical protein TERM 753 710658 - 710674 + G 72 -2.1 -4.77036 | CGTTGGCGATCTGGA CGATCGG ATT CAGACCG TTTTTCCTGATGGCC TERM 754 710812 - 710827 + G 80 -6 -4.72272 | overlap 710810 GTTCGGGTTCGTCCT GGCGGC CATC GCCGGC TTTTTGCTGACCGCA TERM 755 711255 - 711230 - g 71 -8.9 -3.90744 | overlap 711231 TGGCTCGTCAAACAA GGCGCGGCTAA CCTT CCAGCCGCGCA TGGCCGGGTCGATAA Nham_0648 710606 - 711787 + | NnrS Nham_0649 712149 - 711895 - | hypothetical protein TERM 756 712266 - 712278 + GH 74 -4.7 -4.65078 | overlap 712267 712274 GTTGCGCGACTGTTT GGCCG CCG CGGCG TTTTCTTGGCCGTAT TERM 757 712331 - 712315 - gH 72 -2.2 -4.67608 | GAGCGGAAGACAAAA GCATCG GCACT CGATCC GGCATTTTGCATCAT TERM 758 712468 - 712485 + GH 81 -9.8 -4.21402 | overlap 712469 712473 CAAATTCGTCAATCC GCGCCG AAAGCG CGGCGC TTTCTCGTTTTGCAT Nham_0650 712225 - 712611 + | hypothetical protein TERM 759 713003 - 713024 + GF 72 -2.2 -4.7497 | opp_overlap 713014 713015, overlap 712991 713014 713015 CCTCGACCCGCATGA GAAGATCG AAATGC CGGTCGTC TTTTTCGTCGATCCG TERM 760 713491 - 713468 - gf 78 -11.6 -3.66018 | opp_overlap 713482 CCAGGAGCGCAACAA GCGGGCCGGC TCGA ACCCGCCCGC GCCCGGCGGAGAATT Nham_0651 712584 - 713510 + | cytochrome c oxidase assembly protein CtaG/Cox11 TERM 761 713717 - 713734 + F 78 -9.8 -4.07885 | GCTGGCGCCCACAGG GCGCCG GCAGGG CGGCGC TTTTGCCGGGAAATG Nham_0652 713834 - 714502 + | cyclic nucleotide-binding domain-containing protein Nham_0653 714499 - 715371 + | hypothetical protein Nham_0654 715576 - 715986 + | hypothetical protein TERM 762 716226 - 716268 + G 100 -22.3 -3.40403 | TGGATTGCCGCAGCT CATCGCCAGCATTGCTC CGGATGTAC GAGCAATGCTGGCGATG TTCTGCTACCGCCGG Nham_0655 716128 - 716526 + | hypothetical protein Nham_0656 716744 - 717505 + | short-chain dehydrogenase/reductase SDR TERM 763 717543 - 717574 + T 88 -13.6 -3.65991 | opp_overlap 717532 717530 717547, overlap 717534 717544 717547 AATACCGGCGGCCAC ACAAGGCCGGCTCC TTAC GGGGCCGGCCTGGA TTGTATTGCAAAAGT TERM 764 717544 - 717573 + T 87 -17.1 -2.79273 | opp_overlap 717532 717530 717547, overlap 717534 717543 717547 ATACCGGCGGCCACA CAAGGCCGGCTCC TTAC GGGGCCGGCCTGG ATTGTATTGCAAAAG TERM 765 717547 - 717570 + T 87 -17.4 -2.66255 | opp_overlap 717532 717530 717547, overlap 717534 717544 717543 CCGGCGGCCACACAA GGCCGGCTCC TTAC GGGGCCGGCC TGGATTGTATTGCAA TERM 766 717570 - 717547 - T 88 -15.2 -3.48276 | opp_overlap 717534 717547 717544 717543, overlap 717532 717530 CCGGCGGCCACACAA GGCCGGCTCC TTAC GGGGCCGGCC TGGATTGTATTGCAA Nham_0657 718333 - 717590 - | hypothetical protein TERM 767 718422 - 718410 - H 83 -7.7 -4.66537 | opp_overlap 718409 CTCGTCAACAGAAAA TAGCG AGT CGCTA CTATGTCATCCGCGG Nham_0658 718425 - 719000 + | MarR family transcriptional regulator Nham_0659 720449 - 719163 - | hydroxypyruvate reductase Nham_0660 722759 - 720687 - | peptidase M23B TERM 768 722187 - 722244 + g 76 -15.3 -2.52896 | gap 1, opp_overlap 722177, overlap 722193 GGAAACTTCGGCGTC GGGCTCGGCCGCCGCCGCGGCGGCC-GC GTC GCTGGCATCTTCGGCGGCGGTCGGGGCG TGGCTTCCGACGTCG TERM 769 722586 - 722561 - G 100 -13.2 -4.67353 | CGAGCGACGCAAAAA CGGCGCCGCC GATGAG GGCCGCGCCG CACAGACCTGTGAGA TERM 770 723096 - 723113 + H 79 -6.9 -4.56597 | opp_overlap 723087, overlap 723097 CAAGTACGGCGTGAA TCCCCGA AGGG TCGGGGC TTTTTACGCCGCAAA TERM 771 723286 - 723305 + H 78 -8.6 -4.11183 | opp_overlap 723286 723289, overlap 723289 GGTTGAGCGAATCAA CAGCCGAT AGCC ATCGGTTG TTATTTGTCGTCCGG TERM 772 727697 - 727684 - H 83 -4.5 -5.06816 | ACTGTTTAACAAAAA CACAG GGCT CTGCG AAATCGCAAGATGAC TERM 773 729073 - 729019 - H 74 -8 -4.21908 | opp_overlap 729034, overlap 729034 CATCACCATCGAAAA GCAACATCACAAGAA-CGCCGCTTCC TTCAT GGAGGCGGCGTTTTTTGTGCC-TTGC CGGCTTGATGGCCCA TERM 774 729058 - 729034 - H 87 -12.8 -3.89291 | opp_overlap 729034, overlap 729019 GCAACATCACAAGAA CGCCGCTTCC TTCAT GGAGGCGGCG TTTTTTGTGCCTTGC TERM 775 729034 - 729058 + H 100 -15 -5.31456 | opp_overlap 729034 729019 GCAACATCACAAGAA CGCCGCTTCC TTCAT GGAGGCGGCG TTTTTTGTGCCTTGC Nham_0661 729220 - 729816 + | hypothetical protein TERM 776 730070 - 730089 + F 81 -3.4 -5.33026 | opp_overlap 730067, overlap 730072 TCGCATACGCAAGCC GATCCCGC GCGG GCGGAACC TTTTTCTTTCCATTC TERM 777 730619 - 730637 + G 70 -8 -4.07568 | overlap 730620 AAAACATCGTGATCG TCGGCGGC GGC GCGGCCGG TTTTGCGGCCGCCGA Nham_0662 730228 - 731748 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Nham_0663 731802 - 732356 + | methylated-DNA--protein-cysteine methyltransferase TERM 778 732532 - 732520 - f 86 -4.7 -5.18726 | opp_overlap 732520 732521, overlap 732522 GCGTTAGAACAAAAA GCTGG AGC CCGGC TTTGGTTCCATCAAA Nham_0664 732580 - 735114 + | hypothetical protein Nham_0665 735506 - 735123 - | response regulator receiver domain-containing protein Nham_0666 736364 - 735510 - | Zinc finger/thioredoxin putative TERM 779 736973 - 737016 + G 89 -16.7 -3.40403 | gap 1, opp_overlap 736973 GTCCGGCGGCGAGAA GCAGCGCGCG-GCGATCGCC CGCGC GGTGATCGCGCGCCCGCAGC TTCTGCTGGCGGACG TERM 780 737016 - 736973 - g 82 -14.5 -3.28712 | gap 1, opp_overlap 736973 GTCCGGCGGCGAGAA GCAGCGCGCG-GCGATCGCC CGCGC GGTGATCGCGCGCCCGCAGC TTCTGCTGGCGGACG Nham_0667 736545 - 737204 + | ABC transporter related Nham_0668 737197 - 738168 + | hypothetical protein TERM 781 738322 - 738298 - g 77 -12.7 -3.62859 | opp_overlap 738301, overlap 738299 ATGACAAGCCGGAAA CCTCGCGCCGG GCG CCGGCGCGGCG TCGCGCCACGTTGCT TERM 782 738320 - 738299 - g 72 -13.7 -2.77233 | gap 1, opp_overlap 738301, overlap 738298 TGACAAGCCGGAAAC CTCGCGCCGG GCG CCGGCGCG-G CGTCGCGCCACGTTG TERM 783 738332 - 738368 + G 71 -8.5 -3.85698 | overlap 738351 738352 GCGGCGTCGCGCCAC GTTGCTCGCGGCCGTGG TTG CCGCCGCCGGGATCGGC TTTGTCGGAGCGGCG Nham_0669 738264 - 738980 + | hypothetical protein TERM 784 739698 - 739737 + G 70 -10.6 -3.61715 | gap 1 GATCGAGGGGGCGAC CGGCAGCCTGGTCGAGGCG GGG CGTCGCGAGCAGGC-GCGG TTGTTCGGGCGGGTG Nham_0670 739006 - 739773 + | phospholipid/glycerol acyltransferase Nham_0671 740481 - 739897 - | ChaC-like protein TERM 785 740915 - 740971 + G 83 -14.5 -3.44051 | gap 3, overlap 740916 CGACCGTCGAGCTGA AGTCCCAGA-CCGC-CGATCAGGCGGCG ATAG CGCC-CCTGACCGCGCGGCTCGGGGACA TTCTGGTGATCGCGC TERM 786 740916 - 740970 + G 86 -18 -2.66216 | gap 3, overlap 740915 GACCGTCGAGCTGAA GTCCCAGA-CCGC-CGATCAGGCGGCG ATAG CGCC-CCTGACCGCGCGGCTCGGGGAC ATTCTGGTGATCGCG Nham_0672 740662 - 741852 + | hypothetical protein Nham_0673 742982 - 742041 - | cyclohexadienyl dehydrogenase Nham_0674 744076 - 742979 - | histidinol-phosphate aminotransferase TERM 787 743006 - 743029 + g 70 -11.6 -3.18383 | opp_overlap 742997, overlap 743011 CATGAAGTCGCGCAA GCCGTCCGCC ACCA GGCGGTTGGC TTCCTCGGTGCCGAT TERM 788 743108 - 743144 + g 73 -12.9 -3.21099 | opp_overlap 743117 CACGAGGCCGCGTTT GGTCAGGAACGCGTCGG CCT CAGACGCGGTCTTGCCC TTCGTCGTCGGGAAG TERM 789 743183 - 743207 + g 93 -14.3 -3.98826 | GATGAAGTTGGTCAC GCTCGGCGTCA CCT TGAGGCCGAGC TTTGTCACTTCGTCC TERM 790 743651 - 743693 + g 78 -9.9 -4.0896 | opp_overlap 743650, overlap 743639 743681 CACCCGCTGAAGGAT CG-CGTCGACGTCGGCGGT GTAGTCG ACCTCCGGCG-CGACGACG TTTTCCGCGCCGTTT TERM 791 744207 - 744151 - R 79 -13.3 -3.13403 | gap 3, opp_overlap 744175 744180, overlap 744175 TCCTCTTGATCAATA GCTCGCGCGTATTCGATCGCAAAACCGG TATC CCGCTTTTGCG---GAATACGCGCTAGC GGGACTTAACTTTTG Nham_0675 745106 - 744213 - | hypothetical protein TERM 792 744889 - 744922 + g 88 -14.5 -3.7829 | AGACGGCGCATCATG TCGGCTTCGCGCGCC GGGC GGAACGCGGAGCCGA TTTCCTGGGTCTGCT TERM 793 745316 - 745286 - H 73 -11 -3.36837 | opp_overlap 745311, overlap 745284 745304 ACAACTCGCTAAACA GGCCGGGGACAGCA AAA TCCTGATCCCGGCC GAACCCATGTTCAGG TERM 794 745311 - 745335 + H 100 -12.2 -5.26918 | gap 1, opp_overlap 745286 745284 745304 AGCAAAATCCTGATC CCGGCC-GAAC CCAT GTTCAGGCCGG TTTTTTATGGCCTGT metX 745394 - 746593 + | homoserine O-acetyltransferase Nham_0677 746595 - 747263 + | methionine biosynthesis MetW TERM 795 747309 - 747333 + F 82 -13.7 -3.26836 | overlap 747307 747305 747310 CCACCTGGAGCGTTT TCGCTTCTGAT GGA ATCAGAAGCGG TCTCTATTATTTTGA TERM 796 747310 - 747332 + F 81 -15 -2.55017 | overlap 747309 747307 747305 CACCTGGAGCGTTTT CGCTTCTGAT GGA ATCAGAAGCG GTCTCTATTATTTTG Nham_0679 748176 - 748778 + | hypothetical protein Nham_0680 749829 - 748951 - | hypothetical protein TERM 797 750442 - 750432 - g 71 -4.6 -4.4009 | CGCCACGGCAGAAAA CGCC TAT GACG CGCTGAAGAAATATG TERM 798 751075 - 751041 - g 70 -12 -3.21684 | overlap 751039 751042 751044 GGACAAGTACGAACA GCATCACGGCGTCCGC ATC GCCGACGCCGCGCTGG TCGCGGCCGCCACGT TERM 799 751074 - 751042 - g 76 -15.5 -2.52529 | overlap 751041 751039 751044 GACAAGTACGAACAG CATCACGGCGTCCGC ATC GCCGACGCCGCGCTG GTCGCGGCCGCCACG TERM 800 751881 - 751913 + G 81 -14 -3.551 | opp_overlap 751878 751881 ATACATGGAGAAGCA CTCGGTGGCGCGGC TCATC GGCGCGCCTCCGGG TTATGTCGGTTACGA TERM 801 752108 - 752127 + G 77 -4.2 -4.8622 | overlap 752110 CGCTCATCATCATGA CCTCGAAC CTCG GTTCGGAG TTTTTGGTTAACCAG Nham_0681 749959 - 752595 + | ATPase AAA-2 TERM 802 752616 - 752638 + F 85 -15.6 -3.05596 | opp_overlap 752616, overlap 752630 752632 752632 ACGCACGCGATTCAA CCCTTCCTGC AGC GCAGGGAGGG TTGAATAAAACCCTC TERM 803 752638 - 752616 - f 79 -13.4 -3.06915 | opp_overlap 752616 752630 752632 752632 ACGCACGCGATTCAA CCCTTCCTGC AGC GCAGGGAGGG TTGAATAAAACCCTC TERM 804 753277 - 753298 + G 71 -12.9 -3.07501 | AGCGGCCTCCTCCCC GCCGCGGCG CCCG CGACGCGGC TCTTGACGGTTCTGT TERM 805 753481 - 753501 + G 78 -5.4 -4.72486 | gap 1, overlap 753484 CATGCCGAAGGCGAT GCGCCGCAG ACCG CTGTGG-GC TTTTTCGAATTTCTG TERM 806 754527 - 754572 + G 86 -8.1 -4.56597 | gap 1, opp_overlap 754537, overlap 754530 754530 ACCGTACCGCGCCTT CATGCAGGAACGGGAGG-CGCG CGG CGCGTCCGGCCGCTCCTGGCTG TTTTTCGGCGAGCGC TERM 807 754530 - 754570 + G 71 -8.2 -3.90048 | gap 2, opp_overlap 754537, overlap 754530 754527 GTACCGCGCCTTCAT G-CAGGAACGGGAGG-CGCG CGG CGCGTCCGGCCGCTCCTGGC TGTTTTTCGGCGAGC Nham_0682 753076 - 754917 + | sulfite reductase (NADPH) flavoprotein, alpha chain Nham_0683 754928 - 756658 + | sulfite reductase subunit beta TERM 808 756763 - 756716 - f 70 -5.1 -4.54727 | gap 3, overlap 756717 756719 CGCGTCAAATCAAAA TCATAGAGCC-T--CGCTTCTGAT TCC ATCAGAAGCGAAAAGGCTCTAGGC GGGATGAGGAAAAGT TERM 809 756875 - 756829 - f 100 -22.6 -2.55267 | opp_overlap 756829 AAATATTGGAATCGA TCACGTGCATGATTTTGGATCG ATT CGATCCAAAATCATGAGCGTGA TCTTGGCGCGGCCGG TERM 810 756829 - 756875 + F 100 -24.8 -3.01712 | opp_overlap 756829 AAATATTGGAATCGA TCACGTGCATGATTTTGGATCG ATT CGATCCAAAATCATGAGCGTGA TCTTGGCGCGGCCGG TERM 811 756984 - 757008 + F 72 -6.3 -4.33928 | opp_overlap 756937 756985, overlap 756985 GTGACTGCGCAACGC AGGTTGCGCAG TGC CTGCGGGACCG TTTGTGTTTCGGCTG Nham_0684 757012 - 758280 + | O-succinylhomoserine (thiol)-lyase TERM 812 758345 - 758322 - T 100 -13.8 -5.44119 | opp_overlap 758318 CGCACGTCAAAAAAA CCGCGGAGCC AACC GGTTCCGCGG TAAATGGTTTGGATG TERM 813 758492 - 758446 - T 74 -7 -4.27316 | gap 4, overlap 758449 758477 758478 TGCGTCAATTCAAAA TCATAGAGCC-T--CGCTTCTGAT TCC ATCAGAAGCGAAAAGGCTCTA-GA GCGTTTTCGAGCGAA Nham_0685 758984 - 758604 - | hypothetical protein Nham_0686 760306 - 759197 - | exodeoxyribonuclease V Nham_0687 761798 - 760419 - | two component, sigma54 specific, Fis family transcriptional regulator Nham_0688 762196 - 761846 - | flagellar motor switch protein fliH 762843 - 762214 - | flagellar assembly protein H fliG 763931 - 762843 - | flagellar motor switch protein G fliF 765560 - 763938 - | flagellar MS-ring protein TERM 814 765470 - 765428 - G 72 -12.1 -3.35046 | gap 2, opp_overlap 765407, overlap 765426 TGAGGTCGGTAAAGA GCGT-CGTCATC-TGCGGGGC CGT GACGCGCATGATGACGAACGC GAAGAAGCCGATCAG TERM 815 765682 - 765704 + r 81 -9.1 -4.38712 | opp_overlap 765664 765682 CTGAATGGCAAAAAA CCGCCATCC GCAAA GGATGCCGG TTTTCTGAAAATCCG TERM 816 765704 - 765682 - R 100 -9.1 -5.09426 | opp_overlap 765682, overlap 765664 CTGAATGGCAAAAAA CCGCCATCC GCAAA GGATGCCGG TTTTCTGAAAATCCG Nham_0692 766014 - 765739 - | hypothetical protein Nham_0693 766914 - 766222 - | flagellar hook capping protein Nham_0694 768502 - 766925 - | flagellar hook-length control protein TERM 817 768173 - 768185 + g 81 -10.5 -4.18494 | GCCCGATGTTTCGGT GCCCG CGG CGGGC TTTTGAATGCCGGTG trmU 768832 - 770034 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 818 770275 - 770310 + G 75 -14 -3.09015 | gap 1, opp_overlap 770283, overlap 770278 CGGCGTCGACATTTC CG-AACCGATGCTGCGC AAG GCGCAGCAGCGGGTGCG TTCGCTCAATCTCAC TERM 819 770278 - 770306 + G 74 -14.5 -2.55213 | opp_overlap 770283, overlap 770275 CGTCGACATTTCCGA ACCGATGCTGCGC AAG GCGCAGCAGCGGG TGCGTTCGCTCAATC TERM 820 770301 - 770283 - g 74 -14.6 -2.53015 | opp_overlap 770278 770275 ACATTTCCGAACCGA TGCTGCGC AAG GCGCAGCA GCGGGTGCGTTCGCT Nham_0696 770057 - 770695 + | phosphatidylethanolamine N-methyltransferase Nham_0697 770746 - 771090 + | hypothetical protein TERM 821 772858 - 772831 - g 90 -18.4 -3.06696 | overlap 772808 GCCGGCTCGAAGAGA GCGTGCGCGGCC TCAA GGCCGCGCACGA CGTCGCCGGTCAGGC Nham_0698 772098 - 772880 + | phospholipid/glycerol acyltransferase Nham_0699 773815 - 772868 - | hypothetical protein Nham_0701 774423 - 775532 + | transposase, IS4 Nham_0702 775758 - 776132 + | hypothetical protein TERM 822 777198 - 777181 - g 71 -9.1 -3.80858 | GAATACGAACTTAAA GAGCGCG TCGA CGCACTC AACCGGAAGCTCGCC Nham_0703 776539 - 777354 + | hypothetical protein TERM 823 777436 - 777410 - T 75 -10.8 -3.72532 | opp_overlap 777408 GAAGCAACAAATCAA TGTCCTGCGGCG AAC CGCTGCAGGAGA CCTCCCTTCGCTCTA Nham_0704 778309 - 777692 - | hypothetical protein Nham_0705 780025 - 778313 - | sulphate transporter TERM 824 778962 - 778979 + g 77 -2.5 -5.02074 | opp_overlap 778954, overlap 778963 AACAGGATGCCGGCC AGCGCCG CCTG CGGCACG TTTTTTAAAAGGTCG TERM 825 780637 - 780620 - R 71 -7 -4.10161 | opp_overlap 780619 780620 TACCATTGGCGAAAA GCCGTT GAGCTG AACGGC GTTCCTCCTGCTCAT Nham_0707 781084 - 780716 - | hypothetical protein TERM 826 780996 - 781026 + g 74 -11.9 -3.53091 | gap 1, opp_overlap 780991 TCGTGGAAGATCTCG TCGATCGCCGCGCG TCGA CGCGTGG-GGTCGA TTTCGCCAAACACAT TERM 827 781072 - 781086 + g 76 -6.4 -4.42788 | opp_overlap 781061 GCAACAAGGTCGATA CCGTGT TGG ACATGG TTTTCTCCACTTGGC Nham_0708 781668 - 781246 - | DoxX Nham_0709 782852 - 781773 - | NADH:flavin oxidoreductase/NADH oxidase TERM 828 781843 - 781869 + g 78 -3.6 -5.00616 | overlap 781841 CCAAAGAAGGTGGTG CGGTCTGCCG TGTTCAT CGGCGCATCG TTTTTTAAGCGCACG Nham_0710 783780 - 783055 - | hypothetical protein TERM 829 785068 - 785050 - g 78 -5.2 -4.72272 | opp_overlap 785052 785053, overlap 785052 GGTTGGCATCAAAAA GGTCGAAC TGG GTCCGATC GTTGATGGACTGCGC Nham_0711 784052 - 785200 + | secretion protein HlyD TERM 830 786613 - 786632 + G 71 -5.7 -4.386 | gap 1, overlap 786613 786614 TTCCCTCCGCATTCA T-CGCCGG TATTT CCGGCGCA TTTTATCGGCAGTTC TERM 831 786780 - 786752 - g 72 -2.2 -4.71426 | gap 1, opp_overlap 786756, overlap 786747 TGGCCATGAACAAAA GCCGGGCTTCTGG ATGA CC-GTCGGCCGGC CATTCAATGCCTTCT Nham_0712 785232 - 788405 + | hydrophobe/amphiphile efflux-1 HAE1 Nham_0713 789320 - 788637 - | GCN5-related N-acetyltransferase Nham_0714 789699 - 789496 - | hypothetical protein TERM 832 789646 - 789657 + g 90 -2.2 -5.4756 | GTCTTTTGAAAAAAG TCTG CGAA CAGG TTTTTTCTTGGCCTT Nham_0715 790178 - 791506 + | general substrate transporter TERM 833 791577 - 791600 + F 70 -3.8 -4.56597 | opp_overlap 791565 791568 AAATCAGCGTCAACC GCTGAGAC CAAATCGA GCCTCAGC TTTTTACGCACCACG TERM 834 791638 - 791627 - f 75 -5.8 -4.57073 | opp_overlap 791626 CACGCCGGCCAAAAA TCCG CGTA CGGA ATTGATGCAATCGCG TERM 835 791866 - 791915 + G 73 -6.4 -4.25104 | gap 2, opp_overlap 791844, overlap 791867 791867 791869 GCGGGCGTGGCGCAG CGGCGCGCGGCG-A-TCATCGCGG CGGC CCTTGATGAATTCACCGCGCGTGG TTTTGCTGCCACCCG Nham_0716 791806 - 792441 + | TetR family transcriptional regulator Nham_0717 792438 - 793211 + | hypothetical protein Nham_0718 793222 - 794166 + | ABC transporter related Nham_0719 794163 - 795320 + | hypothetical protein Nham_0720 795623 - 795369 - | hypothetical protein Nham_0721 796189 - 795704 - | cupin 2, barrel Nham_0722 796937 - 796527 - | hypothetical protein TERM 836 800710 - 800731 + G 81 -12.3 -3.91911 | gap 1 CCAACCTTGGCTTAA CCGCCGGGCA CGT TGCC-GGCGG TTTGGTTGGCGTCAA TERM 837 803345 - 803321 - g 74 -12.9 -3.36452 | overlap 803281 803282 AGCCGTCAACATCAA TGCGCCGGT GACCGCG ACCGGCGCA AATGCAGCGCTGGCG TERM 838 803674 - 803686 + G 73 -3.3 -4.79352 | CCTCTCAACCTGTTT CAGGA AGC TCCGG TTTTGTTGTCGGTAG TERM 839 805452 - 805437 - g 71 -9 -3.70068 | GATGACAAGGCGAAA GCCGAT GATG ATCGGC GCAAGCGCGAGCGCG Nham_0725 798624 - 805628 + | filamentous haemagglutinin-like protein Nham_0726 805741 - 806364 + | invasion associated locus B TERM 840 806594 - 806570 - f 87 -9.9 -4.62471 | TTCAATTTTGAAAAA CGGCGCTCC GAAGCAG GGCGCGCCG GCTCAGCTGCCGCAA Nham_0727 806644 - 808371 + | hemolysin activation/secretion protein-like Nham_0728 808461 - 808889 + | MotA/TolQ/ExbB proton channel Nham_0729 808882 - 809265 + | biopolymer transport protein ExbD/TolR TERM 841 809360 - 809397 + G 71 -8.9 -3.96327 | TCTGGCATGGCATGG CCGCCTCGCTGGCGCTG CATT CGGCGCTGGCGCTGCCG TTTGTCGTGCACAAT TERM 842 809530 - 809494 - g 73 -2.9 -4.72986 | gap 1, overlap 809495 CAGGCCGAGGAAAAA GTGGC-GCAGCAGC CCGATCAGCC GCAGCAGCAGCCAC AACCGGCGCCGCCAC TERM 843 809563 - 809533 - g 77 -13.8 -3.38272 | overlap 809534 CAGCAGCAGCCACAA CCGGCGCCGCCACC GCA GGAGGCGCCGCCGC CCGAGCCGCAGGAGG TERM 844 809562 - 809534 - g 83 -17.3 -2.62642 | overlap 809533 AGCAGCAGCCACAAC CGGCGCCGCCACC GCA GGAGGCGCCGCCG CCCGAGCCGCAGGAG Nham_0730 809320 - 809997 + | TonB-like TERM 845 810379 - 810422 + G 81 -11.6 -3.87815 | opp_overlap 810403 GGCTCATGCAGCTTT CGAAGCGGACGGTGACGCGG CAAA CGGCGTTGCCGTTCGGTCCG TTTCTCGCGCTCGGC Nham_0731 810003 - 810482 + | peptidase A24A, prepilin type IV Nham_0732 811268 - 810582 - | putative general secretion pathway protein N Nham_0733 811822 - 811265 - | putative general secretion pathway protein M Nham_0734 812877 - 811819 - | fimbrial assembly Nham_0735 813817 - 812903 - | putative general secretory pathway protein K TERM 846 813759 - 813706 - G 72 -12.4 -3.27436 | gap 1, overlap 813704 813743 GATAGACCGAGAAGA TCGTCACCAGCGCCGCGAGCGCGGC GAGCA GCCACAA-CACGGCGACGATGACGA AACCGCGGCGGGATT Nham_0736 814551 - 813814 - | putative general secretion pathway protein J TERM 847 814295 - 814308 + g 100 -3.8 -5.47159 | ACCGATAGGGCCGCG CCGT CGAACA ACGG TTTTTTGTGTTCGCG Nham_0737 814964 - 814548 - | general secretion pathway protein I Nham_0738 815409 - 814936 - | general secretion pathway protein H Nham_0739 815900 - 815406 - | general secretion pathway protein G TERM 848 815447 - 815469 + g 82 -14.8 -3.31144 | CGTCGAGCGAGATGT CGGCGGCGGT GCC GCTGCCGCCG TTCTGGCCGTCGGAA Nham_0740 817129 - 815918 - | type II secretion system protein Nham_0741 818849 - 817140 - | type II secretion system protein E TERM 849 818337 - 818389 + g 81 -16.4 -2.78384 | gap 2 GCGCAGGCTTTCGAC GTCGTCCTCGCGCAGCGCGGACGC GCCGCCG GCGTCCGCG-TGCGCGGCGG-GAC TATCGTCGACGAGCC TERM 850 819386 - 819434 + GH 79 -13 -3.34236 | gap 2, opp_overlap 819380 819377, overlap 819398 CCGAAATCACCGATG CCG-CGGAAGCGCGGCCGC-AGCC GGC GGCGAGCGGCAGCGCTGGCGGCGG TTATGACCTCAATTT TERM 851 820491 - 820467 - gH 79 -12.8 -3.25823 | CGCGCTCGACAGCAA CAGCGGCGGC AATGG GCAGCCGCTG ATGCAGGGCGTGCGC Nham_0742 819160 - 821481 + | type II and III secretion system protein TERM 852 821980 - 821960 - gf 71 -11.1 -3.20382 | opp_overlap 821965 GCGCAGATCCACGAA GGTCAGCGC CTT GCGCTGATC TGGGCGCCAGGACGC Nham_0743 821453 - 822001 + | Sel1-like Nham_0744 822824 - 823753 + | hypothetical protein TERM 853 823874 - 823833 - T 79 -12.5 -3.29471 | gap 1, opp_overlap 823839, overlap 823836 CCGCGACGAGAGCAA TAACCATGGATGCATGGC GCTCTCT GCCG-GCATCCATGGTTA CGCAAGATGAACAGC TERM 854 823871 - 823836 - T 72 -9.8 -3.78778 | gap 1, opp_overlap 823839, overlap 823833 CGACGAGAGCAATAA CCATGGATGCATGGC GCTCTCT GCCG-GCATCCATGG TTACGCAAGATGAAC Nham_0745 824919 - 824323 - | hypothetical protein TERM 855 824745 - 824773 + g 89 -13.1 -4.16016 | CGTAATCTCCTCCCG GATCGGCACCGGG CGT CGAGGTGCCGATC TTTATTGACGGCTCA Nham_0746 827323 - 824999 - | TonB-dependent siderophore receptor TERM 856 825621 - 825643 + g 76 -13.5 -3.17571 | ACCGTCCATTCATCA CTGATGGCG CCAGA CGCCATCAG TTCAATTCCACGATT TERM 857 827650 - 827661 + G 72 -4.4 -4.66537 | overlap 827641 CCGACGCCGTCGCGG TTCC TGCC GGAA TTTTGTCTTCGACGC Nham_0747 827532 - 828545 + | MotA/TolQ/ExbB proton channel Nham_0748 828552 - 829010 + | biopolymer transport protein ExbD/TolR TERM 858 829484 - 829444 - g 100 -11.1 -5.29445 | gap 1, opp_overlap 829474, overlap 829447 GCCGAAGAAGAAAAA GCAGAAGAAGGCGCCGCG CACCAC CGCGCCGCCCACTTC-GC AGGCGCAGCGCGCGG TERM 859 829482 - 829447 - g 76 -12.5 -3.44752 | opp_overlap 829474, overlap 829444 GAAGAAGAAAAAGCA GAAGAAGGCGCCGCG CACCAC CGCGCCGCCCACTTC GCAGGCGCAGCGCGC Nham_0749 829007 - 829816 + | TonB-like TERM 860 830234 - 830196 - f 78 -6.4 -4.57341 | opp_overlap 830195, overlap 830197 AATTTGCGCGAAAAA GCGGGCGCGCCGGGCATC GAC GAAGCCCGTAGTAACCGC GTATCCTAGCTTGGA TERM 861 830363 - 830384 + G 73 -2.9 -4.72272 | overlap 830364 CCGGCAGCCGCTGAT TCTGGCC TATCTGCT GGCCGGG TTTTTCATCGGCCCG TERM 862 831987 - 831968 - g 74 -12.8 -3.28791 | opp_overlap 831968, overlap 831950 ACTCCTGGCCGACAA GCGCGCCG AGTC CGACGCGC TTCTGAGCGAGCGCC Nham_0751 830274 - 832019 + | sodium/hydrogen exchanger TERM 863 832254 - 832197 - f 87 -14.9 -3.21099 | opp_overlap 832220 TTTTCTTACGACTAA CCGGATTCCACTTAGCCGGAAAATGCT CTAG AGCGTTTTCGAGCGAAGTGGATACCGG TTCGCGTGAAGAAAA TERM 864 832332 - 832285 - f 70 -5.1 -4.54727 | gap 3, overlap 832286 832288 CGCGTCAAATCAAAA TCATAGAGCC-T--CGCTTCTGAT TCC ATCAGAAGCGAAAAGGCTCTAGGT CATACGAACCTCCGT TERM 865 833287 - 833274 - g 76 -8.1 -4.1891 | CTCCCCGAACACAAA TCGGC GGAA GCCGA CCGCAACAGGCAGTG Nham_0752 832368 - 833444 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase Nham_0753 833593 - 834807 + | acyl-CoA dehydrogenase-like Nham_0754 835003 - 835950 + | beta-lactamase-like Nham_0755 836901 - 836047 - | hypothetical protein Nham_0756 837971 - 837054 - | LysR family transcriptional regulator TERM 866 837614 - 837556 - G 83 -11.7 -4.08767 | gap 2, opp_overlap 837562, overlap 837557 TCGAGCGGCGGAAAA CGCACGCGCAGCGCGATGTCGACGCCATC GGC GATCACGTCGACCCGGCGC-G-GCGTGCT CTCCAGATGCACCTC TERM 867 837613 - 837557 - G 81 -15.2 -3.05046 | gap 2, opp_overlap 837562, overlap 837556 CGAGCGGCGGAAAAC GCACGCGCAGCGCGATGTCGACGCCATC GGC GATCACGTCGACCCGGCGC-G-GCGTGC TCTCCAGATGCACCT TERM 868 837908 - 837878 - G 78 -10.4 -4.07568 | gap 1 GCCTGTCCTCCAAAA CCGCGAT-GCGGC GACTCA GCCGCGAGCGCGG CATCCCCAGCGCGCG TERM 869 838069 - 838053 - H 85 -15.1 -3.08813 | CTCCATTGCAACACA GCGGCCG ATC CGGCCGC GCCATGGAGGTTTAT Nham_0757 838086 - 838952 + | Pirin-like TERM 870 838959 - 838992 + T 93 -13.1 -4.27519 | opp_overlap 838963, overlap 838960 CCGGCCTGATGACGA CGAAGCGGGAGACGG TCCT TCGTCTCCCGCGTCC TTTGTGTTCTCGCCT TERM 871 838960 - 838991 + T 89 -16.6 -3.15788 | opp_overlap 838963, overlap 838959 CGGCCTGATGACGAC GAAGCGGGAGACGG TCCT TCGTCTCCCGCGTC CTTTGTGTTCTCGCC TERM 872 838988 - 838963 - T 89 -16.2 -3.23216 | opp_overlap 838960 838959 CCTGATGACGACGAA GCGGGAGACG GTCCTT CGTCTCCCGC GTCCTTTGTGTTCTC Nham_0759 841315 - 839687 - | putative acyl-CoA synthetase TERM 873 841572 - 841604 + G 82 -14.7 -3.36505 | opp_overlap 841570 841560 GCAGGCGAGCGAAGG GGCGCCCGCGACGCC CGA GACTTCGCCGGCGCC TTCTGCCTGCCGTCT Nham_0760 841372 - 842499 + | extensin-like TERM 874 842538 - 842515 - T 100 -18.2 -5.75342 | opp_overlap 842518 842532 TGGCGGCAAAAAAAA GAAGCGCCGG AGAA CCGGCGCTTC CGTAAATTTAAGGAG TERM 875 842518 - 842535 + T 83 -14.1 -3.11732 | opp_overlap 842515, overlap 842532 CGGCAAAAAAAAGAA GCGCCGG AGAA CCGGCGC TTCCGTAAATTTAAG Nham_0761 843312 - 842563 - | ErfK/YbiS/YcfS/YnhG Nham_0762 843602 - 844582 + | Mg2+ transporter protein, CorA-like TERM 876 844601 - 844611 + T 93 -8.2 -5.27335 | overlap 844596 GAAGCCCTCTCTGGA GCCG TTC CGGC TTTTTGTTTGACGCG Nham_0763 844943 - 844692 - | hypothetical protein TERM 877 844993 - 845033 + r 100 -14.5 -4.37886 | overlap 844991 844995 ACGATTGTTCCAGCG CGGGAGTTGTGGCGCCCGC GTT GCGTGCGCCACCGCGCCGG TTTTGTGCGGAGTGA TERM 878 844995 - 845031 + r 84 -15.7 -2.53125 | overlap 844991 844993 GATTGTTCCAGCGCG GGAGTTGTGGCGCCCGC GTT GCGTGCGCCACCGCGCC GGTTTTGTGCGGAGT Nham_0764 845949 - 845155 - | short-chain dehydrogenase/reductase SDR Nham_0765 846587 - 845946 - | pyridoxamine 5'-phosphate oxidase Nham_0766 846712 - 847110 + | hypothetical protein TERM 879 847398 - 847370 - g 83 -9 -4.30576 | gap 1, overlap 847395 CCGCGACGATCAAAA GTGCTT-TTCGCA AGCT CGCGAAGAAGCAC CATCCCGATGCCAAC Nham_0767 847309 - 848268 + | chaperone DnaJ-like TERM 880 848382 - 848350 - T 72 -5.5 -4.46652 | overlap 848352 848353 CAAATAAAAATGAAA GAGCCCGCTTCTGAT TCC ATCAGAAGCGGAAAG GCTCTGGGTTAGCGC TERM 881 848380 - 848352 - T 87 -12.5 -3.79335 | overlap 848350 848353 AATAAAAATGAAAGA GCCCGCTTCTGAT TCC ATCAGAAGCGGAA AGGCTCTGGGTTAGC TERM 882 848379 - 848353 - T 86 -16 -2.85161 | overlap 848352 848350 ATAAAAATGAAAGAG CCCGCTTCTGAT TCC ATCAGAAGCGGA AAGGCTCTGGGTTAG Nham_0768 849260 - 848442 - | alpha/beta hydrolase fold TERM 883 848664 - 848648 - G 77 -13.7 -3.29144 | opp_overlap 848633 TCAGGCTGGCGATAA CCGCGAC CTC GTCGCGG AAACCGCCCGGCGTG TERM 884 849439 - 849467 + H 73 -3.2 -4.73388 | gap 2, overlap 849443 GCATCAATTCTCGCC GTCA-TGCCC-CAC CTC GTGCGGGCATTCAC TTTTTCATAGGCATT TERM 885 849946 - 849982 + G 80 -16.6 -2.58231 | gap 2, opp_overlap 849943 849942, overlap 849939 849947 ACTCGCTGAAATCGG GCACCGTCGCCGTGGCGC ATA GCGGCACGGCG-CGG-GC GTTGATGGTTGTGCT TERM 886 849947 - 849983 + G 77 -13.5 -3.31188 | opp_overlap 849943 849942, overlap 849946 849939 CTCGCTGAAATCGGG CACCGTCGCCGTGGCGC ATA GCGGCACGGCGCGGGCG TTGATGGTTGTGCTC Nham_0769 849498 - 850091 + | phosphoglycerate mutase TERM 887 851303 - 851334 + G 73 -11.5 -3.66666 | GCCGATCATTTTCTG CGTCATCGCGGGC AGGTCG GCCCGCGCTGAGG TTTCGCAATTTTAGA Nham_0770 850232 - 851332 + | chorismate synthase clpS 851701 - 851396 - | ATP-dependent Clp protease adaptor TERM 888 851922 - 851873 - R 100 -19.2 -3.54459 | opp_overlap 851900 851902 GGAAGGGGCCGCAAA GGGGGCGGCATTACCCACCCGC GACCGT GCGGGCGGCGAACGCCGCCGCC CGTGTTTTCCGCGAT TERM 889 851900 - 851926 + r 100 -15.1 -4.09685 | opp_overlap 851873, overlap 851902 ACCCACCCGCGACCG TGCGGGCGGCG AACGC CGCCGCCCGTG TTTTCCGCGATCAGG TERM 890 851902 - 851924 + r 100 -17.7 -3.64716 | opp_overlap 851873, overlap 851900 CCACCCGCGACCGTG CGGGCGGCG AACGC CGCCGCCCG TGTTTTCCGCGATCA Nham_0772 853622 - 851937 - | methyl-accepting chemotaxis sensory transducer TERM 891 852646 - 852614 - G 89 -13.3 -4.16016 | opp_overlap 852623 852624 GCACGTTGGAAGAAA CCTCCTGCGAGGCGG CGG CCGCTTCGCCGGATG TCCGGCCGGTGGTCT Nham_0774 854745 - 854422 - | ArsR family transcriptional regulator TERM 892 854966 - 855008 + r 76 -3.3 -5.02074 | gap 2, opp_overlap 854969, overlap 854969 854993 TTCAAGTATCAGATT GAAGGGCGTCTCC-GCG-GCG CGG CGAACGCGGGAGAAGCCGCTC TTTTTTACCACCTCG TERM 893 856236 - 856188 - R 83 -8.2 -4.66163 | gap 2, opp_overlap 856232, overlap 856190 ACGCCGACGTAAAAA CTTCG-CGACCAGTTCC-ACATGC GGC GAATGCCGGAACTGGTCGACGGGG GTCACGGTTTCGAGC Nham_0776 857414 - 856170 - | RNA methyltransferase Nham_0777 858293 - 857538 - | hemolysin A Nham_0778 860525 - 858519 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 894 859991 - 860016 + g 83 -12.5 -3.9461 | TGCCCGCGGACATCG CGCCGTCGCCG ATCA CGGCGATGACG TTGTTCTTGCCGCCG TERM 895 860133 - 860191 + g 86 -16 -3.22475 | gap 2 GGTGCGCTTGGTGAA TCCGGACAGGCCGCCGCCGGTGCGCAGC GTGCG GATGCG-GTCG-CGGCGGCCGGTCAGGA TCTTGTGCGGGTAGG Nham_0779 861272 - 861021 - | exodeoxyribonuclease VII small subunit Nham_0780 862272 - 861343 - | histone deacetylase superfamily protein TERM 896 861887 - 861868 - G 72 -4.3 -4.56597 | gap 1, opp_overlap 861885 CGCCTGGTCGAAAAA GCAGAAGC CCATC GCT-CTGC CGGTCTCGGCATGAT Nham_0781 863173 - 862379 - | enoyl-CoA hydratase/isomerase TERM 897 862626 - 862614 - G 74 -10.5 -3.72695 | ACGGTGTTGACGAAA CCCGC CTC GCGGG CCTCGTCCGCGCTGA Nham_0782 864954 - 863170 - | acyl-CoA dehydrogenase-like TERM 898 863447 - 863484 + g 71 -9.1 -3.73775 | gap 1, opp_overlap 863467, overlap 863448 863477 CTTTCCAGCAGCCAT TTGC-TGGCGCGTTCGAG AGA CCCGAGCGCGTCGCGCAG TTTCGTGCCGGTGGC TERM 899 865074 - 865089 + H 77 -11.8 -3.59979 | opp_overlap 865032, overlap 865075 GTGCGGCGATGCGGC CCGGCC TCAA GGCCGG TTTCGGCTCGACGGC TERM 900 866101 - 866087 - g 72 -2.1 -4.73613 | gap 1, overlap 866088 866091 TGACCATGAAGAAAA TCGACG TCGC CG-CGA TCGAGAAGGCACGGT Nham_0783 865624 - 866124 + | 3-demethylubiquinone-9 3-methyltransferase TERM 901 866310 - 866294 - T 83 -13.7 -3.38218 | overlap 866284 866303 866304 TCAAAGACGTCAGAA CGCCCGA AAC TCGGGCG CCGAAGCGGACATCA Nham_0784 868319 - 866430 - | hypothetical protein TERM 902 867133 - 867103 - G 74 -10.4 -3.72576 | opp_overlap 867111 GCGTGTGTGAGGAAA TCGACCAGCCGACC TCC GGTCGATTCGTCGA AAGGGCTGCGATGGA Nham_0785 870322 - 868331 - | hypothetical protein Nham_0786 871017 - 870319 - | hypothetical protein Nham_0788 872797 - 871934 - | IstB-like ATP-binding protein Nham_0789 874296 - 872797 - | integrase catalytic subunit TERM 903 874326 - 874306 - R 70 -11.9 -2.72661 | CAGCATCCCCAACCA CCTGCTTCG TTC CAAAGCAGG CAGCGCAACAGACCA Nham_0790 874746 - 874354 - | hypothetical protein TERM 904 874632 - 874611 - G 72 -7.9 -4.2349 | opp_overlap 874611, overlap 874614 TTGCCAGATCGAAAA GAGCGCGGT CACG AACGCGCCC TTCATGATCGAGGAA TERM 905 874652 - 874668 + g 78 -3 -4.96848 | TGATCGAGGAAGAAG CGAATC GCCCA GATTTG TTTTTGTGTGAAAGG TERM 906 874827 - 874806 - R 93 -11.5 -4.62475 | overlap 874808 ATGGAGAAACGAAAA CGCCCGAGC TACA GCTCGGGGG CGGAAGGAGACGGTC TERM 907 874825 - 874808 - R 71 -12.7 -2.61117 | overlap 874806 GGAGAAACGAAAACG CCCGAGC TACA GCTCGGG GGCGGAAGGAGACGG Nham_0791 876624 - 875056 - | hypothetical protein TERM 908 876217 - 876192 - G 91 -9.7 -4.63218 | gap 1, overlap 876193 876206 CGCCGTGGAAGAAAA CCGGCCG-CGAC AGA GTCGGCAGCCGA AGCGCAATATCGGAC TERM 909 876304 - 876293 - G 74 -5.8 -4.4017 | TCAAGTTCCACAAAA CTCG TTTC CGAG AACCACTCCTTAACG Nham_0792 877553 - 876621 - | sugar kinase-like protein Nham_0793 878361 - 877609 - | hypothetical protein TERM 910 878782 - 878770 - g 78 -10.5 -4.08767 | TCCATTGCTGCAAAA GGCGG TAC CCGCC AATCTGGCAGTGGAT TERM 911 879466 - 879491 + G 73 -11.2 -3.55563 | gap 1, opp_overlap 879448, overlap 879466 CAACGGCGAACCGCT GG-CGTTGCCG CTAAT CGGCAACGGCC TTTCCAGCGTCAACT Nham_0794 878549 - 879661 + | hypothetical protein Nham_0795 879661 - 880212 + | hypothetical protein Nham_0796 882023 - 880503 - | resolvase-like protein Nham_0797 882510 - 882013 - | hypothetical protein Nham_0798 882860 - 882507 - | hypothetical protein TERM 912 882757 - 882779 + g 70 -7.6 -4.03751 | opp_overlap 882749, overlap 882747 GCAACGACGGCCTTG GCCGGCTTGG TCG CCAATCCCGC TTTGGATTTTGTTTT Nham_0799 883271 - 882957 - | hypothetical protein Nham_0800 883612 - 883319 - | XRE family transcriptional regulator Nham_0801 885410 - 884010 - | Phage uncharacterized protein-like TERM 913 884965 - 884946 - G 70 -7.9 -3.97947 | opp_overlap 884957 GTCATCGATGATAAA CAGGTCT CCTCCC AGACCTG TCAGGGCACCCCCGA TERM 914 884957 - 884989 + g 70 -7.5 -4.07687 | opp_overlap 884946 TAAACAGGTCTCCTC CCAGACCTGTCAGGG CAC CCCCGACTGAGCTGG TTTTACGGAAGCCCT Nham_0802 885891 - 885400 - | hypothetical protein Nham_0803 887198 - 885888 - | DNA methylase N-4/N-6 TERM 915 887075 - 887125 + g 72 -7.9 -4.14739 | gap 2, opp_overlap 887073 887072 887091, overlap 887082 887083 887085 CATCAACCAATAGCG GATAGGTCCAGCCAAATCGCGAAAT GCT ATTT-GCGATTTGGCTG-ATTTGCC TTTTCGAGTGCGTGC TERM 916 887082 - 887119 + g 86 -13.7 -3.93061 | gap 1, opp_overlap 887073 887072 887091, overlap 887075 887083 887085 CAATAGCGGATAGGT CCAGCCAAATCGCGAAAT GCT ATTT-GCGATTTGGCTGA TTTGCCTTTTCGAGT TERM 917 887083 - 887118 + g 87 -17.2 -2.95113 | gap 1, opp_overlap 887073 887072 887091, overlap 887082 887075 887085 AATAGCGGATAGGTC CAGCCAAATCGCGAAAT GCT ATTT-GCGATTTGGCTG ATTTGCCTTTTCGAG TERM 918 887085 - 887116 + g 75 -14 -3.02204 | gap 1, opp_overlap 887072 887091, overlap 887083 887082 887075 TAGCGGATAGGTCCA GCCAAATCGCGAAAT GCT ATTT-GCGATTTGGC TGATTTGCCTTTTCG TERM 919 887294 - 887278 - R 78 -6.6 -4.58283 | overlap 887283 TAATGTTTTGAAAAA GAGATC CTGGC GATCTC GGCGGGCTGCTTTAC TERM 920 887746 - 887761 + r 75 -11.8 -3.28712 | GCCAGGCGACGATGA CGCGGC TCCG GCCGCG TTGTGCGCCGGCGAC Nham_0804 889441 - 887942 - | catalase TERM 921 889267 - 889283 + g 72 -7.9 -4.14392 | CACCCTTGGCGTGCG GCTGCCG CTC CGGCACC TTTTCACGGTTGAAG TERM 922 889382 - 889415 + g 80 -5.1 -4.84033 | ATTGCGGTCGCTGGC CGCCGGTACGCCGGT GCTC ATGGTCGAACCGGTG TTTTGCTTTTTGTGT TERM 923 890405 - 890369 - H 71 -7.2 -4.18494 | gap 1, overlap 890374 GATCCTGATTTAAAA GCTAAGCCAGTGCGTCG TTCG CGATGCAC-GGCATCGC GGTTCAGGTGCGGCA Nham_0807 890815 - 891153 + | transposase TERM 924 891978 - 891961 - g 71 -8.3 -3.87373 | GAGACGTTCCACAAA GGGCGCG ACTT CGCGGCC TGGCTCGGCCTGACG Nham_0808 891241 - 892269 + | transposase IS116/IS110/IS902 Nham_0809 893648 - 892536 - | putative transposase TERM 925 893868 - 893834 - R 74 -13.7 -2.64218 | gap 1, overlap 893833 ATGCCGCACGATAAC TGAGAGCCCGTCGGCT TCGC AGCCGACGGA-TCCCA TCACACTTCGATAAC Nham_0810 894172 - 893963 - | cold-shock DNA-binding domain-containing protein TERM 926 894204 - 894226 + H 79 -13.4 -3.16742 | opp_overlap 894196 894187 894197 CGCGAAAGCGCGTTC GCTCGCACGG CAT CCGTGCAAGC TTGATCCGAGTTCAG Nham_0811 894438 - 894689 + | hypothetical protein Nham_0812 894686 - 894937 + | hypothetical protein Nham_0813 894984 - 895112 + | hypothetical protein TERM 927 895268 - 895290 + T 100 -19.2 -2.82516 | opp_overlap 895264 CCTCGATAGGAGGAG GCTCGCGGAC GAT GTCCGCGAGC TATCGTCGTCAAAGA Nham_0814 896732 - 895377 - | phage uncharacterized protein TERM 928 895994 - 896005 + g 71 -5.8 -4.3078 | overlap 895989 AATGGAATTGCCCGT TCCC GATC GGGA TTTGTTCGTCTGCTT Nham_0815 897162 - 896725 - | hypothetical protein Nham_0816 897822 - 897553 - | hypothetical protein Nham_0817 899513 - 898050 - | hypothetical protein TERM 929 898173 - 898133 - G 72 -11.8 -3.36492 | gap 2, opp_overlap 898130 898169 TGCCGAAGCCGAGAA CGCCGCGATGCCGCTCGACC CCT AG-CG-GCCGCAGCGCGGCG GGCTTTCCTGCGGTC Nham_0818 901758 - 899524 - | hypothetical protein TERM 930 901012 - 901051 + g 74 -14.8 -2.64155 | opp_overlap 900987, overlap 901019 901020 TCCCTCGTCGTAGAG CGCGGGATCGACGCCGGC GGCG GCCGCGGCCGAGCCCGCG TCGCTTTCAAAGCCG TERM 931 901020 - 901054 + g 72 -13.5 -2.71712 | gap 1, opp_overlap 900987, overlap 901012 901019 CGTAGAGCGCGGGAT CGACGCCGGCGGCGGC CGCG GCCGA-GCCCGCGTCG CTTTCAAAGCCGAGA TERM 932 901511 - 901529 + g 72 -11.6 -3.33696 | ATCGCGCGACGCTGC GCACCGGC GCC GCCGGCGC TTCCTTCGGCAAGGC Nham_0819 904861 - 901769 - | hypothetical protein TERM 933 903876 - 903841 - G 74 -13.2 -3.28712 | gap 1, overlap 903842 TGGCCCCCGCGAGAA TGGCGTCGAGGCTGGCG CCT CGCCGGCC-CGACACCT CGGCGTGCGGCGCCT TERM 934 903875 - 903842 - G 80 -16.7 -2.57132 | gap 1, overlap 903841 GGCCCCCGCGAGAAT GGCGTCGAGGCTGGCG CCT CGCCGGCC-CGACACC TCGGCGTGCGGCGCC Nham_0820 908364 - 904858 - | hypothetical protein TERM 935 907182 - 907167 - G 74 -11.8 -3.42996 | overlap 907177 GACGATCGATGAGAA GCCGGC GAAA GCCGGC GAAATCGCGCGCGAG TERM 936 907442 - 907427 - G 74 -4.6 -4.62302 | overlap 907417 907428 907429 CAATAGGCCGAAAAA TCGCCC GTTC GGTCGA GTGTCACCCGAAGGC TERM 937 908375 - 908324 - G 76 -10.6 -3.96148 | opp_overlap 908369 CTGGCCCATGATAAA GACCCGCGTGGAGAGCGGCGCGGG CTTG CCCATGCCGCCATGCGAGCAGGTC ACCTGATTGGTCGGA Nham_0821 909032 - 908424 - | hypothetical protein TERM 938 908999 - 909019 + g 75 -3.1 -4.93296 | overlap 908996 GGCGAACGCTGTCGA CGAAGCCGT ATT GCGCCATCG TTTTTCTGCTCATCG Nham_0822 910160 - 909045 - | hypothetical protein Nham_0823 910511 - 910164 - | hypothetical protein Nham_0824 911179 - 910523 - | hypothetical protein Nham_0825 913905 - 911176 - | hypothetical protein TERM 939 912248 - 912283 + g 76 -14 -3.14344 | gap 1 GGCGTTGGCAGATGC GGTGC-GGGCGGCGC CGGATGC GCGCCGCCCAGTGCC TTCGTGGCGGCCGTG Nham_0826 916592 - 913902 - | hypothetical protein TERM 940 914282 - 914306 + g 79 -11.4 -3.83026 | gap 1, overlap 914286 GGTTGTGCGGGTCCT CCGC-GCGCGC GAAT GCGCGCTGTGG TTTGATGTCCGGCGC TERM 941 914924 - 914936 + g 71 -4.8 -4.52589 | CCTCGCCGTGCGGGC GCGT GACGG ACGC TTTTGTCTCCACCCC TERM 942 914953 - 914967 + g 73 -7 -4.33151 | overlap 914947 914955 TTTGTCTCCACCCCG GTCGCC GCG GGCGTC TTTTCCGTTGTGGTG TERM 943 915435 - 915419 - G 83 -12.3 -4.07568 | TGGCGGGGGCGAAAA CGGCGAT CGG ATCGCCG CCCCCGGCGATCATC Nham_0827 918969 - 916876 - | AAA ATPase, central region Nham_0828 920285 - 918966 - | hypothetical protein Nham_0829 921019 - 920282 - | hypothetical protein Nham_0830 921729 - 921016 - | hypothetical protein Nham_0831 922265 - 921741 - | hypothetical protein Nham_0832 924215 - 922281 - | phage tail sheath protein TERM 944 922579 - 922607 + g 72 -7.3 -4.23674 | opp_overlap 922567, overlap 922582 922583 AGACTCTCTTCGATG TAGAGCGCGGTGC GCC GCACCGCGACGTA TTTATATTCGTCGGC TERM 945 922742 - 922792 + g 84 -16.7 -3.01712 | opp_overlap 922760 CGCTATCCGTCATAG GCACGGTGAGCGACGACACGCCG AGCAG CGACGTGTCGATGCCCGCCGGGC TCTTCCACACGCCGC TERM 946 923941 - 923914 - G 82 -14.2 -3.34209 | gap 1, overlap 923912 923908 GTAATAGAAGCAACA GCAGCAATCGCCG CGT CGGCG-TTGCCGC CCGCGCCATCGTCGA Nham_0834 925124 - 926155 + | transposase IS116/IS110/IS902 TERM 947 926277 - 926263 - T 93 -5.6 -5.52384 | overlap 926264 TCCTGATCAAAAAAA TGGCGT TAG ACGCCG ACGGCTTTATGAGGA TERM 948 926276 - 926264 - T 72 -9.1 -3.90707 | overlap 926263 CCTGATCAAAAAAAT GGCGT TAG ACGCC GACGGCTTTATGAGG Nham_0835 926746 - 926369 - | transposase IS3/IS911 TERM 949 926690 - 926669 - G 70 -7.9 -4.07568 | gap 1, opp_overlap 926671, overlap 926670 GTCTTCCGTCGAAAA GCGCCGC-CG GGT CGCGCGGCGG ATATCCTTGACCACA TERM 950 928069 - 928047 - g 71 -11.2 -3.41051 | GCAGTGGCACCATAA CGGCGAACGC TAC GCGCTCTCCG ACAAGCTGGCGCCGT TERM 951 929517 - 929563 + G 76 -10.9 -3.76125 | gap 2, opp_overlap 929541 929559, overlap 929515 929518 929541 929546 TTGCGACTGGCAGGT GGCCGGCCTT-GCGCCGA-GCAA CTA TTGCCTCAGCGCAAAGGACGGCA TTTCCATTCCGCTGG TERM 952 929518 - 929562 + G 77 -14.4 -2.85354 | gap 2, opp_overlap 929541 929559, overlap 929515 929517 929541 929546 TGCGACTGGCAGGTG GCCGGCCTT-GCGCCGA-GCAA CTA TTGCCTCAGCGCAAAGGACGGC ATTTCCATTCCGCTG TERM 953 931087 - 931101 + G 81 -7.8 -4.41895 | CTCGATTGCCCGTCG GCCGGA TGT TTCGGC TTTTCGTTCACGCTT Nham_0836 926998 - 931308 + | hypothetical protein TERM 954 931600 - 931611 + T 84 -3.6 -5.31519 | CAACGCTTACCCATT CCCT GCTT GGGG TTTTTCTTTCCCTGT TERM 955 931751 - 931766 + T 72 -9 -3.83205 | opp_overlap 931750 931751 AATTCCCTGTAAAAT TCCCTG TTAG CAGGGA TTTCGTGTGGAGACT TERM 956 931875 - 931846 - T 86 -15.9 -2.82742 | gap 1, opp_overlap 931853 931874, overlap 931853 ATCTCCGGAGAATTA GCGAAAAGCCCGCT AAT AGCGGGCTTTT-GC AGCAGGGCGGCCTTC TERM 957 931853 - 931869 + T 95 -13.7 -4.07568 | opp_overlap 931846 931853 GAGAATTAGCGAAAA GCCCGCT AAT AGCGGGC TTTTGCAGCAGGGCG TERM 958 931869 - 931853 - T 95 -13.7 -4.24963 | opp_overlap 931853, overlap 931846 GAGAATTAGCGAAAA GCCCGCT AAT AGCGGGC TTTTGCAGCAGGGCG Nham_0838 934479 - 934126 - | hypothetical protein TERM 959 934549 - 934531 - R 75 -11.7 -3.24924 | overlap 934529 GTGCCACTGACAAGA CCTCGCC GACTG GGCGAGG GAGGAGAAGTCCGTA Nham_0841 936808 - 936317 - | hypothetical protein TERM 960 937786 - 937810 + r 78 -8.5 -4.14243 | opp_overlap 937780 937787, overlap 937787 GGGAAGAGATCAGAT AGCTCGCCAAG CTC CTTGGCGAGGA TTTTGCGGTCCCATC TERM 961 937809 - 937787 - R 71 -12 -3.01003 | opp_overlap 937786 937787, overlap 937780 GGAAGAGATCAGATA GCTCGCCAAG CTC CTTGGCGAGG ATTTTGCGGTCCCAT TERM 962 937787 - 937809 + r 73 -12 -3.08224 | opp_overlap 937787 937780, overlap 937786 GGAAGAGATCAGATA GCTCGCCAAG CTC CTTGGCGAGG ATTTTGCGGTCCCAT TERM 963 938674 - 938689 + r 75 -11.8 -3.28712 | GCCAGGCGACGATGA CGCGGC TCCG GCCGCG TTGTGCGCCGGCGAC Nham_0843 940369 - 938870 - | catalase TERM 964 940195 - 940211 + g 72 -7.9 -4.14392 | CACCCTTGGCGTGCG GCTGCCG CTC CGGCACC TTTTCACGGTTGAAG TERM 965 940310 - 940343 + g 80 -5.1 -4.84033 | ATTGCGGTCGCTGGC CGCCGGTACGCCGGT GCTC ATGGTCGAACCGGTG TTTTGCTTTTTGTGT Nham_0845 942490 - 940937 - | phospholipase D/transphosphatidylase TERM 966 942612 - 942636 + H 74 -7.1 -4.39166 | opp_overlap 942606, overlap 942613 TAAGGAAAACTCTGA TGGGCATCAAA GGA TTCGGTGCCCG TTTTCGTGTGTGACG Nham_0846 942661 - 943539 + | endonuclease/exonuclease/phosphatase Nham_0847 944092 - 944961 + | LysR family transcriptional regulator Nham_0849 945356 - 945817 + | MaoC-like dehydratase Nham_0850 946206 - 945958 - | hypothetical protein Nham_0851 947181 - 946219 - | alpha/beta hydrolase fold Nham_0852 947526 - 947215 - | hypothetical protein Nham_0853 947592 - 948035 + | hypothetical protein Nham_0854 949223 - 948228 - | catalase-like TERM 967 948400 - 948422 + g 76 -11.3 -3.74872 | gap 1 TCGCCGAGTTCTACC GTC-GGCCGG CTGT CCGGCCAGAC TTTCGTGGCATCCGT Nham_0856 950391 - 949975 - | transposase IS3/IS911 Nham_0858 951870 - 951001 - | phage integrase Nham_0859 952111 - 952623 + | XRE family transcriptional regulator TERM 968 953332 - 953300 - T 91 -12.7 -4.07568 | opp_overlap 953303 953304, overlap 953302 953303 CTTGGCGGCTTAAAA CACCCCGGCTGGATG AAT CATCCAGCCGGATTT TCTCGTCGAGAACCA TERM 969 953330 - 953302 - T 95 -15.3 -3.63744 | opp_overlap 953303 953304, overlap 953300 953303 TGGCGGCTTAAAACA CCCCGGCTGGATG AAT CATCCAGCCGGAT TTTCTCGTCGAGAAC TERM 970 953329 - 953303 - T 100 -18.8 -2.78032 | opp_overlap 953303 953304, overlap 953302 953300 GGCGGCTTAAAACAC CCCGGCTGGATG AAT CATCCAGCCGGA TTTTCTCGTCGAGAA TERM 971 953303 - 953329 + T 100 -16.6 -4.46212 | opp_overlap 953303 953302 953300, overlap 953304 GGCGGCTTAAAACAC CCCGGCTGGATG AAT CATCCAGCCGGA TTTTCTCGTCGAGAA TERM 972 953304 - 953328 + T 100 -20.1 -3.27406 | opp_overlap 953303 953302 953300, overlap 953303 GCGGCTTAAAACACC CCGGCTGGATG AAT CATCCAGCCGG ATTTTCTCGTCGAGA TERM 973 953576 - 953524 - T 71 -12.6 -2.57211 | gap 2, overlap 953523 AGGCGCCGCGATAAG CCGCGCCCCGATAGACCCCGC-G-GG CAG CCGCTGCGCGCGCTACCGGCGCGCGG GCGATTGGACGGGAC Nham_0861 954751 - 954230 - | GCN5-related N-acetyltransferase Nham_0862 954911 - 955993 + | hypothetical protein TERM 974 957433 - 957418 - g 70 -11.8 -3.21099 | TCGCCCGAGGATGAA CGGCGG TTTG CCGCCG CCAAGCGTGTATCGG TERM 975 958036 - 958050 + G 74 -10 -3.78793 | opp_overlap 958035 958034 ACCGAGTTCAAAATG CTGGTC CGC GACCAG TTCTTCATGCTTCTG Nham_0863 956071 - 958299 + | hypothetical protein Nham_0864 958329 - 959300 + | phosphate acetyltransferase Nham_0865 959306 - 960520 + | acetate kinase Nham_0866 960517 - 961305 + | enoyl-(acyl carrier protein) reductase Nham_0867 962062 - 961412 - | 3-oxoacid CoA-transferase, subunit B Nham_0868 962713 - 962066 - | 3-oxoacid CoA-transferase, subunit A fixK 963949 - 963266 - | transcriptional regulator FixK Nham_0871 964206 - 965300 + | tISRso5; ISRSO5-transposase protein Nham_0872 965473 - 966105 + | two component LuxR family transcriptional regulator TERM 976 966111 - 966093 - f 72 -5.3 -4.42238 | opp_overlap 966093 966096 TGATCCCAACGAAAA TACCGGT AGCTA ACCGATA CTTTTGTCCGCCGCC Nham_0873 966259 - 966666 + | response regulator receiver domain-containing protein TERM 977 966656 - 966646 - f 77 -2.4 -5.09895 | opp_overlap 966648, overlap 966648 GAGTCAGTCAAAAAA GCGC GCA GAGC GTCATTCTAGCCGAT TERM 978 967073 - 967093 + G 78 -4.7 -4.71828 | TCACGGCACGGTTGG CGAATGG GAACAAG CCGTTCG TTTTGTTCCTCCGAT Nham_0874 966894 - 967571 + | hypothetical protein TERM 979 967717 - 967751 + G 76 -8.4 -4.12397 | AGTGTCACTGGCCTA TGCGGGCCTTGCGGGG TTG CCGCCCGAGGTCGGCA TTTATGGTTATCTGC Nham_0875 967568 - 969298 + | sulphate transporter Nham_0876 969557 - 969991 + | hypothetical protein Nham_0877 970866 - 970033 - | hypothetical protein TERM 980 970078 - 970114 + g 79 -13.8 -3.41745 | opp_overlap 970087, overlap 970087 ACGCAGGCCCGCCTG GTCGTCAAAGCGTTCC TTCGT GGAACGCTTTGGCAGC TTGATCTTATCCCGA TERM 981 970087 - 970105 + g 70 -10.3 -3.58037 | opp_overlap 970087, overlap 970078 CGCCTGGTCGTCAAA GCGTTCC TTCGT GGAACGC TTTGGCAGCTTGATC Nham_0878 971333 - 970878 - | hypothetical protein Nham_0879 971493 - 971957 + | hypothetical protein Nham_0881 973201 - 973620 + | hypothetical protein TERM 982 974135 - 974110 - g 84 -11.1 -4.19817 | gap 1, opp_overlap 974104 974110 CTGATTCAGGCAAAA TCCG-GCGCGGC AAT GCCGGGCACGGA TTTGCTCCTCTCCCA TERM 983 974110 - 974135 + G 76 -11.1 -3.81951 | gap 1, opp_overlap 974110, overlap 974104 CTGATTCAGGCAAAA TCCG-GCGCGGC AAT GCCGGGCACGGA TTTGCTCCTCTCCCA Nham_0882 973711 - 974505 + | hypothetical protein Nham_0883 974502 - 974792 + | hypothetical protein TERM 984 975671 - 975694 + G 74 -4.6 -4.63486 | gap 1, overlap 975673 GCGCTTCGGCAACTC CA-CGGAGTGT CCA ATGCTCCGATG TTTTCTTACGACGAT Nham_0884 974885 - 976792 + | histidine kinase Nham_0885 976914 - 978539 + | hypothetical protein TERM 985 978902 - 978935 + G 74 -9.7 -3.86822 | gap 1, overlap 978904 CGCAAGAGCGGTTGG GAAT-TCGACACGGCC GCC GGGCGTGTTGAGATTC TTTCTCGCCGCATTG Nham_0886 978536 - 979462 + | hypothetical protein Nham_0888 980148 - 979924 - | periplasmic nitrate reductase NapE Nham_0889 980639 - 982909 + | formate acetyltransferase Nham_0890 982923 - 983750 + | pyruvate formate-lyase activating Nham_0891 983783 - 985384 + | YidE/YbjL duplication Nham_0892 985604 - 986014 + | F0F1 ATP synthase subunit epsilon TERM 986 986627 - 986640 + F 74 -8.1 -4.10164 | CTAGGCGAAGTCTCT GCGCT CTCA AGCGC TTTATCTCATCGTCG Nham_0894 987203 - 988306 + | calcium/proton exchanger Nham_0895 989237 - 988812 - | hypothetical protein TERM 987 989723 - 989711 - H 70 -4.8 -4.42386 | CCGCCAGCCAGAAAA CAGC AAGTG GCTG AAAACACAAAGTAAT TERM 988 990244 - 990215 - g 71 -9.3 -3.727 | gap 1, opp_overlap 990215 CCGACGAGACCGAAA TGTCAGCGGACGGC ATG ACCG-CTGCTGACA TTGCTGCGGTCCAAG TERM 989 991131 - 991165 + G 83 -6.5 -4.87892 | gap 2, opp_overlap 991129 991130 991131, overlap 991129 ACAATCAAAAGAAGG GGCCGCC--GGAAAATC TCT GGTTTTCCATGGCGCCC TTTATTTTATTCCGA TERM 990 991309 - 991294 - g 74 -2.6 -4.86385 | ATCGCGAAAAACAAA TTTCGA CGCA TCAAAA ATGGCCAGTCAAAGC Nham_0896 989800 - 991449 + | hypothetical protein Nham_0897 991671 - 991976 + | hypothetical protein Nham_0898 992453 - 992160 - | hypothetical protein TERM 991 993892 - 993906 + r 78 -3.5 -5.06414 | GGAATCGGCGGCGCC GTTGG AAATG CCAGC TTTTTCTTGAGCGAG TERM 992 994083 - 994106 + r 74 -11 -3.55548 | overlap 994086 CGCGGTGTGCGTCCC CTTCGGTGTC AATC GGCGCCGAAG TTTGACCCCGTATTG Nham_0900 994954 - 994091 - | IstB-like ATP-binding protein Nham_0901 996453 - 994954 - | integrase catalytic subunit TERM 993 996483 - 996463 - R 70 -11.9 -2.72661 | CAGCATCCCCAACCA CCTGCTTCG TTC CAAAGCAGG CAGCGCAACAGACCA Nham_0904 998687 - 997452 - | hypothetical protein TERM 994 997576 - 997556 - G 71 -6.2 -4.27584 | gap 1, overlap 997542 ACCCGCAAGCCAAAA TGATC-GCC CACG GGCTGATCA GGATAGGCCAGCCAG TERM 995 997861 - 997828 - G 76 -8.8 -4.2461 | gap 1, overlap 997829 ACCGTGATCAACAAA CTGC-CGAGGAGCCG TACGG CGGCCCCGCGTGCAA ATAGGATATCCGCTG TERM 996 998034 - 998047 + g 73 -8.1 -4.07568 | opp_overlap 998007 998002 CGTGCCCCGCACAGC GCCGA GCAC TCGGC TTTTCGCAGCCGACA Nham_0905 999415 - 998684 - | ABC transporter related TERM 997 999095 - 999082 - G 73 -8.1 -3.97834 | GAACGCCAGCATAAA CGAGC GGAA GCTCG ACATTTTCCAGCGCG Nham_0906 1000779 - 999430 - | secretion protein HlyD Nham_0907 1001218 - 1001571 + | hypothetical protein TERM 998 1001982 - 1002002 + T 80 -10.5 -3.98826 | overlap 1001984 TGACAAGAATGGTGA TGTCGGCAA GGC TTGCCGATA TTTCTGCGTTGGTCG TERM 999 1001984 - 1002000 + T 74 -10.9 -3.58209 | overlap 1001982 ACAAGAATGGTGATG TCGGCAA GGC TTGCCGA TATTTCTGCGTTGGT Nham_0909 1004294 - 1002819 - | hypothetical protein TERM 1000 1004178 - 1004196 + g 76 -10.2 -3.82946 | CAGTAGCAGCGAGTT CCGGCGTT TAC GGCGCCGG TTCTCTTTGAGATCG Nham_0910 1005125 - 1005718 + | carbonic anhydrase TERM 1001 1006238 - 1006266 + T 95 -14.7 -3.67296 | opp_overlap 1006240 CCACTTCACCGGAGA GACCTATGATCAC GTC GTGTTCATAGGTC TTTCCGTCAATCGTG Nham_0911 1007659 - 1006436 - | 6-phosphofructokinase Nham_0912 1008131 - 1009249 + | hypothetical protein Nham_0913 1009431 - 1009907 + | Ferritin and Dps Nham_0914 1009992 - 1012946 + | aconitate hydratase 1 Nham_0915 1012962 - 1013432 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1002 1013793 - 1013808 + G 76 -7.5 -4.36914 | opp_overlap 1013789, overlap 1013800 TCGGCCGGAAAGTCT CCGCG AGCCGC CGCGG TTTTCTCGGCGGAGC TERM 1003 1013800 - 1013849 + G 76 -14.1 -3.21747 | opp_overlap 1013789, overlap 1013793 GAAAGTCTCCGCGAG CCGCCGCGGTTTTCTCGGCGGAG CCGG CCTTGCCGCGATGAGCGCGGCGG TTGGTGGTGCGATCC TERM 1004 1015024 - 1015049 + G 73 -6.9 -4.31379 | gap 1 TCCGCAGGGCTATGG CGGCAACGCC ATGCACC GG-GTTGCCG TTTTGGTGGGTTGAT Nham_0916 1013678 - 1015063 + | twin-arginine translocation pathway signal TERM 1005 1015093 - 1015117 + G 91 -19.3 -2.98823 | overlap 1015104 TTGCACACTCGCACG GCTGCCGCGCG CAT TGCGCGGCAGC TCTCTCTGGCCGCGG TERM 1006 1015198 - 1015218 + G 84 -8.1 -4.42386 | opp_overlap 1015178 1015177, overlap 1015197 GAGGATTATCCGCCC GGCGACGGC CGC GACGGCGCC TTTTATGCCTGCACC Nham_0917 1015069 - 1015434 + | hypothetical protein Nham_0918 1015561 - 1016250 + | NnrS Nham_0919 1016320 - 1016706 + | hypothetical protein Nham_0920 1017457 - 1016813 - | maleylacetoacetate isomerase Nham_0921 1018819 - 1017473 - | homogentisate 1,2-dioxygenase Nham_0922 1019780 - 1018824 - | beta-lactamase-like Nham_0923 1020022 - 1019777 - | hypothetical protein TERM 1007 1019867 - 1019857 - G 71 -4.6 -4.4078 | GTTTTGCAAGCAAAA CCGC CTC GCGA AGGACCTCCACATCC Nham_0924 1021644 - 1020019 - | hypothetical protein TERM 1008 1020484 - 1020510 + g 72 -7.3 -4.18018 | gap 1, opp_overlap 1020486 TTTCGCAAGCCGAAG CACGGCATGGCG CATC CGCCGT-TCGTG TTTTGAATGGGGGGC TERM 1009 1021164 - 1021192 + g 81 -11.7 -3.90744 | TCTCAACAATGGCGT GGTCGTTGTGCTG CTC CAGACCAACGACC TTGTTTCGCCAGCGC Nham_0925 1021709 - 1021903 + | hypothetical protein Nham_0926 1021958 - 1023259 + | fumarylacetoacetase TERM 1010 1023842 - 1023855 + G 71 -9.5 -3.73414 | CAAGGTTCAGGACGA GGCCG GCCA CGGCC TTTACCTCTACTGTG Nham_0928 1023579 - 1024568 + | phenylacetate-CoA oxygenase subunit PaaA TERM 1011 1024607 - 1024572 - f 71 -11.1 -3.22298 | gap 1, overlap 1024550 GCCACCGAGTAGCAA CCGGGTCAG-GCCGCC GTTCG GGTGGCTCCAACCCGG TCACGGGAGAGAAAC Nham_0929 1024623 - 1024907 + | phenylacetate-CoA oxygenase subunit PaaB Nham_0930 1024907 - 1025758 + | phenylacetate-CoA oxygenase, PaaI subunit Nham_0931 1025768 - 1026292 + | phenylacetate-CoA oxygenase, PaaJ subunit Nham_0932 1026312 - 1027388 + | ferredoxin TERM 1012 1028121 - 1028073 - g 85 -6.1 -5.04385 | gap 2 GATACGCTGAAAAAA TTCGGC-CTGCGCCA-CACCTCC AACGA GGAATTGCTGGCGCAGTGGCAAA CCGTGACCGGCGAAA Nham_0933 1027407 - 1028159 + | phenylacetic acid catabolic TERM 1013 1028545 - 1028569 + G 70 -12.1 -3.17075 | TTGGGTGGACATCGA GGGCGGCATCG GTA CGATGCTGACC TTCGCTTCGAAGGGC Nham_0934 1028228 - 1030303 + | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase Nham_0935 1030968 - 1030369 - | TetR family transcriptional regulator Nham_0936 1031398 - 1031081 - | phenylacetate-CoA ligase Nham_0937 1031876 - 1031427 - | phenylacetic acid degradation protein PaaD Nham_0938 1032655 - 1031873 - | enoyl-CoA hydratase Nham_0939 1033121 - 1033381 + | hypothetical protein TERM 1014 1033919 - 1033891 - g 76 -8.1 -4.11394 | opp_overlap 1033882 1033912 ATGGTACGCGCAAAA CGACATCGCCC TGATCAC GGGTGATGCCG TCGCGCGCATTGATC Nham_0940 1033712 - 1034332 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Nham_0942 1035523 - 1036062 + | hypothetical protein TERM 1015 1036245 - 1036262 + F 70 -4.8 -4.54047 | TAGGTCTGGAACTCG GTGCTG GTGAGG CAGCGC TTTTCTGTGCGCTCG TERM 1016 1038349 - 1038373 + G 71 -5.5 -4.36914 | opp_overlap 1038350, overlap 1038350 TTCAGGTGCAGAGTA ACGCCTCCGTC ACC GACGTCGGCGG TTTTGTCGGCGAGAA TERM 1017 1041418 - 1041454 + G 78 -12.3 -3.73224 | overlap 1041416 GTATCAATCCGCTGT TCGACCCCGCGAGTGGA ACC TTCATTGGCAGGGTCGA TTTCGTGAACAATAC Nham_0943 1036359 - 1043345 + | filamentous haemagglutinin-like protein Nham_0944 1044341 - 1043946 - | ArsR family transcriptional regulator Nham_0945 1044970 - 1044338 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Nham_0946 1045274 - 1046161 + | beta-lactamase-like Nham_0947 1046204 - 1047868 + | hypothetical protein Nham_0948 1047883 - 1048662 + | hypothetical protein Nham_0950 1049571 - 1049972 + | hypothetical protein TERM 1018 1050049 - 1050066 + F 77 -8.3 -4.31835 | GATCATTTTCGGTCT CGCGAGC TTCA GCCCGCG TTTCTTGTCGAGATT Nham_0951 1050449 - 1054093 + | nitrate reductase, alpha subunit TERM 1019 1054165 - 1054132 - f 82 -13.8 -3.23692 | GACCACGATCATGAA CCGGCTCCGGCGCA TTTCGG TGCGCCTGAGCGGG TTAGCGTCGGGAAAT TERM 1020 1055435 - 1055457 + G 79 -8.3 -4.25104 | GGCCTTCGCCATGGG GCTCGTCGC AGTCG GCGTCGGGC TTTTGATCGCCAACA TERM 1021 1055875 - 1055925 + G 90 -8.9 -4.91109 | gap 1, overlap 1055879 1055916 TGGTGCGTCTTGCGC TCGGGCCGGGCAATGCAC-GGCTG CTTC CGGCCAGCGCATTTTCGGGCGCGA TTTTTCTGGTCGCCG Nham_0954 1054989 - 1056059 + | transport system permease protein Nham_0955 1056056 - 1056871 + | ABC transporter related Nham_0956 1057922 - 1056891 - | periplasmic binding protein TERM 1022 1056969 - 1056951 - G 86 -6.6 -5.00616 | overlap 1056954 1056963 CGGCGTCTTAAAAAA CATCGCGT AGA ACGCGGCG ACTTCGTCGCGGATG Nham_0957 1058259 - 1060631 + | TonB-dependent receptor TERM 1023 1060676 - 1060637 - T 95 -15.6 -3.72893 | opp_overlap 1060641, overlap 1060641 TAGGTTCTGACGAAA TCAAGCAGCGCGCCGCGC AAAT GCGCCGCGCGCCGCTTTT TTTGTCTTTGCCGAA TERM 1024 1060641 - 1060672 + T 100 -18.6 -5.88197 | opp_overlap 1060641 1060637 TTCTGACGAAATCAA GCAGCGCGCCGCGC AAAT GCGCCGCGCGCCGC TTTTTTTGTCTTTGC TERM 1025 1060672 - 1060641 - T 100 -20.8 -3.56704 | opp_overlap 1060641, overlap 1060637 TTCTGACGAAATCAA GCAGCGCGCCGCGC AAAT GCGCCGCGCGCCGC TTTTTTTGTCTTTGC Nham_0958 1061777 - 1060692 - | luciferase-like Nham_0959 1062784 - 1062152 - | autoinducer synthesis protein Nham_0960 1065662 - 1063074 - | peptidase C14, caspase catalytic subunit p20 TERM 1026 1063931 - 1063949 + g 81 -4.5 -5.00884 | gap 1, overlap 1063918 GTGCCGATGGATTCT GCGGCCGG ATCA TCG-CCGC TTTTTTGGCCACCGT TERM 1027 1064455 - 1064436 - G 71 -9.2 -3.71848 | CGGTGGCAGGAAGAA CACCGGCG GTGG CGGCGGTG GCGCGAATCCATAGT TERM 1028 1064948 - 1064926 - G 70 -7.6 -4.01135 | overlap 1064927 TCGAAGAACATGAAA GGCGCCTCGA TCT TCGACGCGCT CCAGGGCACTTCGCC Nham_0961 1066354 - 1065881 - | hypothetical protein TERM 1029 1067359 - 1067378 + r 71 -11.4 -3.322 | CACCACGACCTCGTC CCCGGCAG TGAT TTGCCGGG TTGGTATGTCGAGAT TERM 1030 1067855 - 1067838 - R 73 -12.7 -2.74523 | overlap 1067835 CGATGCCGAACAGCA GGGCCAG AAAT CTGGCCC GGTCGGCGATCAGCA Nham_0963 1068816 - 1067893 - | hypothetical protein TERM 1031 1068626 - 1068612 - G 73 -11.4 -3.62046 | GCACGCTTGCAACAA CGCCAG AGA CTGGCG TTCCGATAGCAATGT Nham_0964 1069538 - 1068813 - | ABC transporter related TERM 1032 1070009 - 1069997 - g 73 -6.3 -4.36914 | opp_overlap 1069997, overlap 1070001 GGTGGCTTGAGAAAA TCAAG AAA CTTGA TTTCTACGGTGCCCC Nham_0965 1069579 - 1070130 + | ChrB domain-containing protein TERM 1033 1070389 - 1070334 - g 76 -11.2 -3.72576 | gap 2, overlap 1070335 CGCTTGCCCAGGAAA TCGCC-GACGGCGTCGCCG-AACC GCACGCTCAG GGTGGCGGCGACACCGTCTGGCGG TATCACTACGAGACT TERM 1034 1070388 - 1070335 - g 77 -14.7 -2.83403 | gap 2, overlap 1070334 GCTTGCCCAGGAAAT CGCC-GACGGCGTCGCCG-AACC GCACGCTCAG GGTGGCGGCGACACCGTCTGGCG GTATCACTACGAGAC Nham_0966 1070127 - 1070414 + | hypothetical protein Nham_0967 1071086 - 1070613 - | hypothetical protein TERM 1035 1071472 - 1071440 - R 87 -9.8 -4.57073 | opp_overlap 1071446, overlap 1071443 1071446 CATCGCGGCTAAAAA CAAGAAGGCCGCCC TGGTC GGGCAGCCTTGGTG TCAATCACAAACCCG TERM 1036 1071469 - 1071443 - R 85 -10.1 -4.40561 | opp_overlap 1071446, overlap 1071440 1071446 CGCGGCTAAAAACAA GAAGGCCGCCC TGGTC GGGCAGCCTTG GTGTCAATCACAAAC TERM 1037 1071466 - 1071446 - R 93 -11.8 -4.31587 | opp_overlap 1071446, overlap 1071443 1071440 GGCTAAAAACAAGAA GGCCGCCC TGGTC GGGCAGCC TTGGTGTCAATCACA TERM 1038 1071497 - 1071484 - R 78 -9.5 -4.05446 | GGTGTCAATCACAAA CCCGC ACTC GCGGG CGCACCCAACGCTCG Nham_0968 1071751 - 1071473 - | hypothetical protein TERM 1039 1071911 - 1071895 - R 80 -9.4 -4.15044 | TCCGGCCCCAACAAA CCGACG AATGG CGTCGG GAGCGATCAGGTTTT Nham_0969 1072394 - 1072047 - | hypothetical protein Nham_0970 1073317 - 1072418 - | hypothetical protein TERM 1040 1073276 - 1073304 + g 93 -8.7 -5.10933 | overlap 1073279 AGACAACAGCATCCC CAACGCCAGCGCG GTC CGCGCCAGCGTTC TTTTCTTTTCCATGC TERM 1041 1073279 - 1073301 + g 95 -10.4 -4.6313 | overlap 1073276 CAACAGCATCCCCAA CGCCAGCGCG GTC CGCGCCAGCG TTCTTTTCTTTTCCA Nham_0971 1074904 - 1073759 - | hypothetical protein TERM 1042 1073962 - 1073945 - G 74 -12.7 -3.30771 | opp_overlap 1073942 CGACATGTCCGAGAA GCGGTCG TGCA CGACCGC GCCTTTCCACGGGTC TERM 1043 1074024 - 1074004 - G 71 -14 -2.53876 | opp_overlap 1074002, overlap 1073984 1073981 CCCCACGCGAACGCA CGGCGGGA TCGGT TCCCGCCG CCGGGCGGAACAGCA TERM 1044 1074878 - 1074860 - G 81 -11.6 -3.87815 | GTGTATCCGGATAAA CGCGCGCC GGA GGCGCGGG ATCCATGTGGCGGAG Nham_0972 1077233 - 1074945 - | TonB-dependent siderophore receptor TERM 1045 1076956 - 1076942 - G 74 -9.2 -3.83026 | overlap 1076943 CCCCGGCATAGGAAA CGGGCG GCA CGCCCA GCGTCGCGGTGGAAG Nham_0973 1077648 - 1077406 - | hypothetical protein Nham_0974 1079302 - 1077764 - | hypothetical protein TERM 1046 1078952 - 1078976 + g 73 -2.9 -4.67982 | gap 2, overlap 1078932 CGCGGCATGGGCGGT CACCA--GCGC CTGCA GCGCCATGGTG TTTTCTTCCATCAGA Nham_0975 1080618 - 1079299 - | hypothetical protein Nham_0976 1082583 - 1080634 - | putative serine protein kinase, PrkA TERM 1047 1080922 - 1080942 + g 78 -6.7 -4.66833 | overlap 1080924 GTTGCGGAAGTCCTT CGGGTTGGC TAT GCCGGCCGG TTTTTCGACTTGCGA TERM 1048 1081171 - 1081183 + g 95 -10.5 -4.57837 | opp_overlap 1081164 1081163 1081171 TATGAAATCGAGATA GGCGG ATT CCGCC TTTTTCGGAAACTGT Nham_0977 1082913 - 1082614 - | hypothetical protein TERM 1049 1083491 - 1083520 + H 100 -18.7 -3.90744 | opp_overlap 1083491 1083495, overlap 1083495 CGCGTAGCTAATGTA GAAAGGTCCGGCA TCGC TGCCGGGCCTTTC TTATTTGAGCGCCGA TERM 1050 1083520 - 1083491 - H 85 -16.5 -2.54896 | opp_overlap 1083491 1083495, overlap 1083495 CGCGTAGCTAATGTA GAAAGGTCCGGCA TCGC TGCCGGGCCTTTC TTATTTGAGCGCCGA TERM 1051 1083516 - 1083495 - H 85 -11.5 -3.98083 | opp_overlap 1083495 1083491, overlap 1083491 TAGCTAATGTAGAAA GGTCCGGCA TCGC TGCCGGGCC TTTCTTATTTGAGCG TERM 1052 1083495 - 1083516 + H 100 -13.7 -4.56978 | opp_overlap 1083491 1083495, overlap 1083491 TAGCTAATGTAGAAA GGTCCGGCA TCGC TGCCGGGCC TTTCTTATTTGAGCG TERM 1053 1083775 - 1083760 - H 75 -5.4 -4.57073 | gap 1, overlap 1083761 1083762 GAGCTGCTGGAAAAA GCGCAGC ACA GCTGC-C TCACGCCAAGTTGCA TERM 1054 1084032 - 1084064 + G 81 -12.2 -3.86346 | CTTGAGTCTTAGCGC GCTCGGCAACG-TTCG CAC CGAATCGTTGC-GAGC TTTCTCGGCGGATGA Nham_0979 1083817 - 1084110 + | hypothetical protein TERM 1055 1084761 - 1084745 - g 75 -3.7 -4.81249 | opp_overlap 1084750 GTTGAAACGCAAAAA TCAAATC GGC GACCTGA TTCTACCGATTGCGG Nham_0980 1084407 - 1085240 + | AMP nucleosidase TERM 1056 1085256 - 1085242 - T 75 -9.2 -3.93695 | opp_overlap 1085245, overlap 1085246 GGCATGAGGCATAAA GCGACG GCA CGCCGC GGGCTGATGATCTTC Nham_0982 1086966 - 1085473 - | EmrB/QacA family drug resistance transporter Nham_0983 1088615 - 1087236 - | type I phosphodiesterase/nucleotide pyrophosphatase TERM 1057 1089523 - 1089503 - g 76 -6 -4.56597 | overlap 1089468 1089466 CCGCCGCGCGAAAAA CGCGCCGG GATGG CCGAGGCG GTGAAGGTGGCGCTG aroB 1088894 - 1090087 + | 3-dehydroquinate synthase TERM 1058 1091046 - 1091082 + G 73 -8.6 -4.03978 | opp_overlap 1091037, overlap 1091048 CAAGGAGGGCCGCGC CCGCGGCGAATGGCGG ATTCA TTGCCATGTGCCGCTG TTTCTGTCCGACCTT TERM 1059 1091048 - 1091080 + G 70 -9.8 -3.61232 | overlap 1091046 AGGAGGGCCGCGCCC GCGGCGAATGGCGG ATTCA TTGCCATGTGCCGC TGTTTCTGTCCGACC Nham_0985 1090084 - 1091286 + | hypothetical protein Nham_0986 1091283 - 1092161 + | UbiA prenyltransferase Nham_0987 1092170 - 1093075 + | hypothetical protein Nham_0988 1093072 - 1093476 + | hypothetical protein Nham_0989 1093618 - 1095045 + | hypothetical protein TERM 1060 1095056 - 1095114 + F 91 -12.6 -4.08216 | gap 2, opp_overlap 1095066, overlap 1095059 AGTAACTGCCCCTCG CGAGC-TAAC-AGTTACCATCGCCCGCA CATCC TGCGGGCGATGGTAGCGGGTGATGCTAG TTTTGAGAGCCGTGC TERM 1061 1095059 - 1095111 + F 76 -12.9 -3.08032 | gap 2, opp_overlap 1095066, overlap 1095056 AACTGCCCCTCGCGA GC-TAAC-AGTTACCATCGCCCGCA CATCC TGCGGGCGATGGTAGCGGGTGATGC TAGTTTTGAGAGCCG TERM 1062 1095102 - 1095066 - f 100 -21 -3.08679 | opp_overlap 1095059 1095056 CCTCGCGAGCTAACA GTTACCATCGCCCGCA CATCC TGCGGGCGATGGTAGC GGGTGATGCTAGTTT Nham_0990 1095164 - 1095643 + | cytochrome c, class I Nham_0991 1095640 - 1096782 + | TatD-related deoxyribonuclease TERM 1063 1097394 - 1097429 + F 72 -4.8 -4.64334 | gap 1, overlap 1097398 1097427 GGACCAGAGCCTTTT CGCGTCTGA-TGGAATC AGA GATTTTAATTTGACGCG TTTTCTTCACGCATT TERM 1064 1098196 - 1098179 - g 80 -4.8 -4.92385 | gap 1, overlap 1098181 TACACCGAAATAAAA GC-GCCG ATCGA CGGCCGC ATTGGCCGAACCTCG Nham_0992 1097669 - 1098817 + | secretion protein HlyD Nham_0993 1098821 - 1101967 + | hydrophobe/amphiphile efflux-1 HAE1 TERM 1065 1102015 - 1102061 + F 100 -30.6 -4.00042 | opp_overlap 1102018 CGACATCCTGGCAAG CTAGAGCCTTTTCGCTTCTGAT GGA GTCAGAAGCGAAAAGGCTCTAG TTGTTTGCTGAAAAA TERM 1066 1102058 - 1102018 - f 100 -25.8 -2.52676 | opp_overlap 1102015 CATCCTGGCAAGCTA GAGCCTTTTCGCTTCTGA TGGAG TCAGAAGCGAAAAGGCTC TAGTTGTTTGCTGAA Nham_0994 1102066 - 1102290 + | hypothetical protein Nham_0995 1104784 - 1102382 - | glucan 1,4-alpha-glucosidase TERM 1067 1104736 - 1104769 + g 95 -15.2 -4.03413 | overlap 1104737 TGGTACTCGACGTCC ACCGCGCCGGGCTG CCGGGC CACCCCGGCGCGGG TTTGTCTAAGGGCAT TERM 1068 1104737 - 1104768 + g 91 -18.7 -3.01726 | overlap 1104736 GGTACTCGACGTCCA CCGCGCCGGGCTG CCGGGC CACCCCGGCGCGG GTTTGTCTAAGGGCA TERM 1069 1105870 - 1105906 + r 70 -3.6 -4.57837 | opp_overlap 1105867, overlap 1105867 1105871 GGCCCGAGGCAAGCA GCGTGGTGCGCGC-CGTG AAG CGCGAGCGCGT-CTGCGA TTTTTCCGACAATCT Nham_0996 1107410 - 1106055 - | glutamate dehydrogenase TERM 1070 1106254 - 1106288 + g 71 -13.4 -2.52464 | overlap 1106259 GCGTTCTGCTGCATT TCCAGCGCCGACGTGG CGA CCCCGCCGGCGTTGGC TGCCTTGCCGGGACC TERM 1071 1106259 - 1106283 + g 71 -12.7 -3.09933 | overlap 1106254 CTGCTGCATTTCCAG CGCCGACGTGG CGA CCCCGCCGGCG TTGGCTGCCTTGCCG TERM 1072 1107531 - 1107555 + r 74 -12.8 -3.01791 | overlap 1107519 CATGGCGGCGTCGAT GGCGCGGGCT TCGAT GGCCTGCGCC TGTTCCGGCAAAGGT Nham_0997 1109469 - 1108156 - | periplasmic sensor signal transduction histidine kinase TERM 1073 1109068 - 1109105 + g 78 -15 -3.05384 | gap 2 GTCCTGCGCGACTTC GTCGCGGTTGGCCGTCGG TTGA CCGACGGC-GAC-GCGAC TTCCATCGGAGCGCG TERM 1074 1109212 - 1109235 + g 83 -16 -2.92442 | gap 1, overlap 1109207 1109205 GGAAGCCGGGTTTCC CCGGGCGTCGG CCG CCG-CGCCCGG TCTGATCTCTTCGAT Nham_0998 1110128 - 1109466 - | two component transcriptional regulator TERM 1075 1110179 - 1110190 + H 70 -3.6 -4.56597 | overlap 1110170 TTATACCAGCCGCCT GGCC GTTC GGTC TTTTTCGGCGGCGGC TERM 1076 1110707 - 1110752 + G 86 -8.1 -4.57569 | overlap 1110709 1110747 CGCCTGGGTCTATTG GATCGCCATCGTAGCGTCGAC GACA GTCGGCACCGCCATGGCGGAC TTTTTCGACCGCTCC TERM 1077 1111006 - 1111025 + G 71 -8.6 -3.83318 | gap 1 TGGTCTTCGGTGCCG CGCTCGCAA TCG TTGCG-GCG TTCTATTATTGGACG Nham_0999 1110459 - 1111241 + | hypothetical protein TERM 1078 1111277 - 1111254 - f 72 -9.6 -3.73224 | gap 1 TGATCCCGGACGAAA TGATCGGCTGC TTC GC-GCCGACCA AAGGTTGGAATCTGC TERM 1079 1111699 - 1111730 + G 74 -5 -4.66938 | gap 1 GTCTTCCTGCCAAGC GGCTCCCGGTCGGTC GGC GATCG-CCAGGCGTC TTTTCTATTGCCGAT Nham_1000 1111309 - 1112067 + | hypothetical protein Nham_1001 1112407 - 1112207 - | hypothetical protein Nham_1002 1117112 - 1112649 - | hypothetical protein TERM 1080 1113059 - 1113044 - G 86 -11.8 -4.19506 | ACGTGAAGGCGAAAA CCGGCG CGGC CGCCGG GCCCGAGATACCGAT TERM 1081 1113668 - 1113645 - G 83 -14.6 -3.53224 | GACCGTGCCGGGAAA GCCCGCATCG GGCG CGATGCGGAC CTGGCCGGAGCCGGA TERM 1082 1114679 - 1114657 - G 70 -12.6 -2.91695 | opp_overlap 1114670, overlap 1114654 CGCAGGTCGAAATTA CGGATCGCCG CAC CGGCGGCCCG AAGTCCCGTGCCCTT TERM 1083 1115555 - 1115593 + g 76 -15.3 -2.53015 | gap 1 AGCGGCCGAGATCGG GCACGGTACCGGTTGCGC GGCC GCGCAGCCGGTCTCG-GC TGGCTTCGCCGGTAT TERM 1084 1117238 - 1117221 - R 71 -10.5 -3.48395 | ACCGGCGTGAGATAA CGCAGGC CAAT GCCCGCG CCGTAGCCGACATAA TERM 1085 1117514 - 1117473 - R 83 -14.3 -3.04144 | gap 1, overlap 1117454 TGCGCATCCGGAATA CCGGCCAGCGGCGCGC-CGC CGA GCGAGCCCATCGCCAGCCGG CCCGCCAGCACATAG TERM 1086 1118700 - 1118668 - R 83 -13.3 -3.53012 | opp_overlap 1118666 1118688 CTCCCGGTTGCGAAA GCTCTCGGCGCGGCG CAC CGCGGCGGCGAGACC GGTCTCGTCGCGCGA TERM 1087 1118688 - 1118735 + r 84 -15.7 -2.65815 | gap 3, opp_overlap 1118668, overlap 1118666 1118709 CGGCGCGGCGCACCG CGG-CGGCGAGA--CCGGTCTCGT CGC GCGAGACCGGAATCCCGCCGACCG TGATGTCGATCTCGG Nham_1004 1120213 - 1119344 - | formamidopyrimidine-DNA glycosylase TERM 1088 1119410 - 1119396 - G 71 -9.2 -3.72576 | overlap 1119372 CCGTTCTGCACGAAA CGGCGC ACC ACGCCG TCGCAGCCGGGTGTC Nham_1005 1120742 - 1120383 - | putative monovalent cation/H+ antiporter subunit G Nham_1006 1121017 - 1120739 - | putative monovalent cation/H+ antiporter subunit F Nham_1007 1121502 - 1121014 - | putative monovalent cation/H+ antiporter subunit E TERM 1089 1121343 - 1121304 - G 78 -14.2 -3.02144 | opp_overlap 1121329, overlap 1121307 CGATGTCCGCGAAGA CGACAGCAGCCAGGCGGA CGAT TGCGCCCGGCCGCCGTGG ATGGGCTTTCGGCGG TERM 1090 1121340 - 1121307 - G 75 -14.5 -2.73875 | opp_overlap 1121329, overlap 1121304 TGTCCGCGAAGACGA CAGCAGCCAGGCGGA CGAT TGCGCCCGGCCGCCG TGGATGGGCTTTCGG Nham_1008 1123106 - 1121499 - | putative monovalent cation/H+ antiporter subunit D TERM 1091 1122324 - 1122311 - G 80 -5.9 -4.67982 | CGTCACCGAACAAAA GCAGC GATA GCCGC AGGATGATGTAGGCG TERM 1092 1122792 - 1122776 - G 72 -7.9 -4.19258 | overlap 1122764 1122762 1122779 ACAGGGGATGGAAAA GCACCCC CGC GCGGTGC CAGCGCGCCAGCGAG TERM 1093 1123093 - 1123052 - G 93 -20.9 -3.06261 | gap 1, opp_overlap 1123049 CTCCAAGCGCCAACA TGATCGCGCCGG-CGAGCAG CGG CAGCACGACCGGCGCGATCA TCAGATGATTCACGA Nham_1009 1123447 - 1123103 - | putative monovalent cation/H+ antiporter subunit C Nham_1010 1126383 - 1123447 - | putative monovalent cation/H+ antiporter subunit A TERM 1094 1124196 - 1124173 - G 71 -8.8 -3.85698 | overlap 1124176 GGCGTTCTCGACAAA GAACCGCGCA ATGC TGCTCGGCTC GGGGCGAGTCATGAC TERM 1095 1124659 - 1124640 - G 74 -13.6 -2.90615 | overlap 1124637 ACGCTGCGCAAATCA GCAACCGC AACT GCGGTTGC AAGCGGCGCGTGCCA TERM 1096 1125089 - 1125067 - G 72 -4 -4.65895 | CGGTGGACCGAAAAA CACCTCGGCT ATG AACCGCAGCG AGTAAGCGACCGTGA TERM 1097 1126571 - 1126598 + H 87 -3.6 -5.42259 | gap 1 TCCCGGCAGCTTGCT GAAAA-ACCAAGG AAG TTTTGGTATTTTC TTTTTTTGCGGGTCG TERM 1098 1127564 - 1127617 + H 78 -6 -4.56597 | gap 3, opp_overlap 1127580 1127581, overlap 1127566 1127581 TGCCGAAGTTGACGA AGCCGCCGGCCCAGAAGGCGAGATCGC TCG GCGATC-CGC-TCTTGGGC-GGAGGTG TTTTTCCGGAAAGCC TERM 1099 1127566 - 1127615 + H 77 -10.8 -3.90048 | gap 3, opp_overlap 1127580 1127581, overlap 1127564 1127581 CCGAAGTTGACGAAG CCGCCGGCCCAGAAGGCGAGATCGC TCG GCGATC-CGC-TCTTGGGC-GGAGG TGTTTTTCCGGAAAG TERM 1100 1129015 - 1129062 + H 75 -11.9 -3.21695 | opp_overlap 1128998, overlap 1129019 1129028 1129029 CGTTGCCGCCGGGGG CGGTCACC-GCGACCGCGACCGC ACCG GCGGCCGCGTGCGCCGGTG-TCG TTGCATTGATGGTGG TERM 1101 1129019 - 1129059 + H 80 -14.6 -2.79684 | gap 1, opp_overlap 1128998, overlap 1129015 1129028 1129029 GCCGCCGGGGGCGGT CACC-GCGACCGCGACCGC ACCG GCGGCCGCGTGCGCCGGTG TCGTTGCATTGATGG TERM 1102 1129029 - 1129066 + H 71 -12.7 -2.53715 | gap 1, opp_overlap 1128998, overlap 1129019 1129015 1129028 GCGGTCACCGCGACC GCGACCGCACCGGCG-GC CGC GTGCGCCGGTGTCGTTGC ATTGATGGTGGTGCC TERM 1103 1129734 - 1129777 + H 74 -13.7 -2.52635 | overlap 1129733 GCGCCGCTGCCGTAG CCCACCGTAGCGCTGACCG CGCCGA CGGTCGGGGCGGCGGCGGG ATTGATGGTCACCGT TERM 1104 1130748 - 1130715 - H 85 -11 -4.07568 | gap 1, overlap 1130721 1130722 GTGGTGCCGGTAAAA CTCAAACCCGGCGGC AGCGA GCCGCCGG-TCAGAG AAAAACCATAGGGCG TERM 1105 1130743 - 1130721 - H 83 -11.9 -3.92659 | overlap 1130715 1130722 CCGGTAAAACTCAAA CCCGGCGGC AGCGA GCCGCCGGT CAGAGAAAAACCATA TERM 1106 1130742 - 1130722 - H 84 -15.4 -2.95113 | overlap 1130721 1130715 CGGTAAAACTCAAAC CCGGCGGC AGCGA GCCGCCGG TCAGAGAAAAACCAT Nham_1012 1131724 - 1132254 + | phage tail Collar Nham_1013 1132289 - 1132819 + | phage tail Collar Nham_1014 1132864 - 1133406 + | phage tail Collar Nham_1015 1133393 - 1133980 + | GCN5-related N-acetyltransferase TERM 1107 1133998 - 1133984 - T 72 -6.4 -4.27316 | opp_overlap 1133984 GCCGTCAATTGAAAA TCGCCT GGT AGACGA TCCCTTGCCGGTCGC Nham_1016 1134266 - 1133973 - | hypothetical protein TERM 1108 1134291 - 1134310 + H 71 -10.8 -3.56643 | CCCCCTCTGCCTGCC CGGTTCAT CGAC ATGAACCG TTTAAGAACTATGCC TERM 1109 1134596 - 1134613 + G 72 -4.1 -4.59511 | gap 1, overlap 1134603 ATGTTGCGTGGTGGA TC-GGCGG CGC TCGCCAGA TTTTTCGCGGGTGTT TERM 1110 1134603 - 1134626 + G 75 -3 -4.89339 | overlap 1134596 GTGGTGGATCGGCGG CGCTCGCCAG ATTT TTCGCGGGTG TTTTTGTCAGTGGTT TERM 1111 1134842 - 1134784 - g 70 -10.1 -3.63515 | GCCCACCCTCAAGAA GCAGGCACCTGCCGCGCCAC-TGCCCGGC AAT ACCGAGCCTGT-GCGCGGCGACCGCCAGC TCGATCTCAAGATCG TERM 1112 1135754 - 1135716 - g 73 -6.6 -4.25283 | AGCCCGGCACGAAAA CGTTGCTGAAAGCCGACG CCA CTGCGGCCTTCATCAAGG ATACGTGCGGCACCA Nham_1017 1134581 - 1136731 + | multicopper oxidase, type 2 TERM 1113 1137642 - 1137665 + G 74 -13.8 -2.87132 | CAAGTCTACGATGCA GTCAGCGCCG CTTG CGGCGCGGAC TATGTGGAGGGAGAG Nham_1018 1136718 - 1138718 + | tyrosinase TERM 1114 1141181 - 1141212 + G 70 -12.2 -3.18118 | overlap 1141178 1141176 TCGCGTATGGGAGAC CCTGTGGTGGCCGG CGCA CCGGCCGATGCAGG TCTATTATCCCGTCG Nham_1019 1138758 - 1141403 + | hypothetical protein Nham_1020 1141406 - 1141822 + | hypothetical protein Nham_1021 1141803 - 1142981 + | FAD dependent oxidoreductase Nham_1022 1143195 - 1143010 - | hypothetical protein TERM 1115 1143526 - 1143503 - R 77 -12.4 -3.53343 | opp_overlap 1143501 AACTCTCTGGTCAAA GCATCCGACC GCAA GGTCGGGTGC GATACTATGGAAGCG TERM 1116 1143548 - 1143584 + r 78 -11.6 -3.63694 | gap 2, opp_overlap 1143539 1143566 ATGGAAGCGTTTGGA GCG-GGCGA-GGACAGCG AAG CGCCGTCCGTCGCCATGC TTCTTCACGCTGGCT Nham_1023 1144517 - 1144020 - | putative signal peptide protein TERM 1117 1144105 - 1144130 + g 70 -13.3 -2.88544 | ATCGTGACTTTGCCA TCGCGCGCGAT CAAC ATCGTGCGCGG TATGTCGCCCTGCCA Nham_1024 1145722 - 1144514 - | BNR repeat-containing glycosyl hydrolase Nham_1025 1148114 - 1145739 - | TonB-dependent receptor TERM 1118 1147090 - 1147114 + g 85 -14.3 -3.57792 | opp_overlap 1147074 GTCCGGCGATCGGTG CGGCCGAGC CCGGCCT GCTCGGCCG TTTCGCGGTCGGTCC TERM 1119 1147942 - 1147968 + g 76 -5.9 -4.57073 | gap 2, overlap 1147920 1147943 1147963 GGCTGTGACGGTCTC G-GAGCGGT-GCG GCG CGCGACCGTTCGC TTTTTGCGCGGACTG Nham_1026 1148576 - 1148211 - | hypothetical protein Nham_1027 1149976 - 1148813 - | hypothetical protein TERM 1120 1149608 - 1149570 - G 70 -12.5 -2.90075 | gap 1 GCCTGGGCAACGATA CCTTGCG-CCAAGGCCAT GGCG ATGGCCGTGGACGAAAGG TGCGCGCTGGTCGCG Nham_1028 1150314 - 1150147 - | hypothetical protein Nham_1029 1150399 - 1151913 + | CHAD Nham_1030 1152955 - 1151999 - | peptidase S1 and S6, chymotrypsin/Hap TERM 1121 1153448 - 1153428 - g 86 -13.9 -3.85698 | opp_overlap 1153447 CCTGTCCTTGAGAAA GCCGGTCCG GTA CGGCCCGGC CACCTCATCGTCGTA Nham_1031 1153137 - 1154009 + | PDZ/DHR/GLGF Nham_1032 1154035 - 1154640 + | LuxR family transcriptional regulator Nham_1033 1154937 - 1155179 + | hypothetical protein Nham_1034 1155578 - 1155228 - | hypothetical protein Nham_1035 1155885 - 1155643 - | hypothetical protein TERM 1122 1156017 - 1156030 + r 71 -8.1 -4.06419 | ACGGTCAGATCGCCG GCCAG CTTC CTGGC TTATTTCTCCGGCCC Nham_1036 1157287 - 1156031 - | putative heat-shock protein HSP 70 TERM 1123 1157411 - 1157381 - H 75 -5.3 -4.56597 | GGGCGTTCTGAAAAA TGGCCGCACTCGC GGGTT GCGATCGAAGCCA GTCCACAGATCAATT TERM 1124 1157493 - 1157505 + H 70 -4.8 -4.42386 | TCCATAAGCGTCATT TGGC GGCGA GCCA TTTTATCCGTCGCGG TERM 1125 1159435 - 1159413 - g 95 -10.4 -4.59773 | opp_overlap 1159430, overlap 1159414 CGCGAGCTGGAAAAA CCCGGTCGCG ATC CGCGCCCGGC CTTCAAGGCTGCGGT TERM 1126 1159434 - 1159414 - g 77 -13.9 -3.35542 | opp_overlap 1159430, overlap 1159413 GCGAGCTGGAAAAAC CCGGTCGCG ATC CGCGCCCGG CCTTCAAGGCTGCGG TERM 1127 1159790 - 1159762 - g 78 -6.5 -4.57353 | overlap 1159776 TCCCACGAGACAAAA CCCGCCCGATGAC ATC GCCGCCGGCCAGG CCGCATCAGCAGTCC Nham_1037 1157541 - 1159877 + | RNA binding S1 TERM 1128 1159872 - 1159916 + F 100 -12.3 -4.54727 | opp_overlap 1159872 1159880 AGCGGCAAGACTAAG TCATAGAACCCCGCTTCTGAT GGA GTTAGAAGCGGTGCTTTATGA TTTTGATTTAGCGCG TERM 1129 1160264 - 1160237 - g 100 -16.4 -4.64861 | CCGTCTGAAAATAAA GAGACGTCTCCA TCGA CGGAGACGTCTC AGCCGATCGACGAAT Nham_1038 1160126 - 1161046 + | hypothetical protein Nham_1039 1161175 - 1161681 + | (2Fe-2S)-binding Nham_1040 1161678 - 1162694 + | molybdopterin dehydrogenase, FAD-binding TERM 1130 1162939 - 1162908 - g 72 -12.2 -3.29144 | opp_overlap 1162895 CGATGGGCGCGACAA GGTCACCGGCGCCG CACG CTACGCCGGTGAGC ACGGCGCACCCGACC TERM 1131 1164567 - 1164519 - g 100 -13.8 -4.60487 | gap 1 CATTATCTCCAAAAA GCCGCCGCGCAGCACGA-TTCCG ATTG CGGACGTCATGCGGCACGCCGGC GTCGACCGTATCGCG Nham_1041 1162858 - 1165065 + | twin-arginine translocation pathway signal TERM 1132 1165094 - 1165080 - f 76 -12.8 -3.05384 | GCTTGTGTGATCGAA GGCCCG CTC CGGGCC GGAGGACTGAACCAT TERM 1133 1165181 - 1165164 - g 76 -5.5 -4.56133 | GCCGAAGAAGGAAAA GCCGAAA GTGA TTGCGGC GGCTCCAAGCATGAA Nham_1042 1165108 - 1165239 + | hypothetical protein Nham_1043 1166301 - 1165372 - | LysR family transcriptional regulator Nham_1044 1168592 - 1166478 - | para-aminobenzoate synthase, component I TERM 1134 1169392 - 1169375 - g 74 -10.5 -3.73647 | opp_overlap 1169375 1169377 CGGAGCGATCAAGAA CCGCCGC AAGA ACGGCGG CTTCTACTGGGTGCT TERM 1135 1169968 - 1169949 - g 71 -12.8 -3.07994 | GTCAATTCCACGCAA CGCCGGGC CGAG GCCCAGCG CAAGACGGACATGAC TERM 1136 1170012 - 1169989 - g 71 -11 -3.45849 | CGGACATGACGAGAA TCGCCGATTC CTTC GAAGCGGCGA TCGGCGAGATCGTTG TERM 1137 1170762 - 1170745 - g 71 -11.3 -3.53012 | TGTCCGCTGCGCAAA CGCTGTC GCGC GACAGCG CCCGGCTCAAGGCAG Nham_1045 1169121 - 1170815 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Nham_1046 1170827 - 1171174 + | hypothetical protein Nham_1047 1171606 - 1172070 + | hypothetical protein Nham_1048 1172778 - 1172119 - | cobyrinic acid a,c-diamide synthase Nham_1049 1173277 - 1174389 + | hemolysin-type calcium-binding region TERM 1138 1174415 - 1174445 + F 95 -14 -4.37527 | opp_overlap 1174421, overlap 1174421 GGAGGAGCAGCATCT GTGAAAGCCCCGCT ACC GGCGGGGCTTTTTC TTTTAATCATTGTGA TERM 1139 1174439 - 1174421 - f 81 -13.1 -3.56092 | opp_overlap 1174415 1174421 GCAGCATCTGTGAAA GCCCCGC TACCG GCGGGGC TTTTTCTTTTAATCA TERM 1140 1174421 - 1174439 + F 100 -13.8 -5.50723 | opp_overlap 1174421, overlap 1174415 GCAGCATCTGTGAAA GCCCCGCT ACC GGCGGGGC TTTTTCTTTTAATCA Nham_1050 1174800 - 1175426 + | hypothetical protein TERM 1141 1176827 - 1176801 - g 72 -7.8 -4.13945 | opp_overlap 1176800 1176805, overlap 1176802 ATTCGGACGGTAAAA TCGCTGGCGCTC GAT GCGCGGCAGCGC CATTTGTGGGATGTG Nham_1051 1175724 - 1177958 + | ABC transporter related TERM 1142 1178818 - 1178805 - g 71 -5.9 -4.2828 | GGCGACCTATGAAAA GGCGC TCAA GCACC AGAATCTCGTGCGCT Nham_1052 1177948 - 1179297 + | Type I secretion membrane fusion protein, HlyD TERM 1143 1180205 - 1180228 + G 81 -4.5 -5.06414 | overlap 1180186 GCGCAAGGACTACTT TCCGGCAGT CCAGGC GCTGGCGGA TTTTTATTCGCACGG Nham_1053 1179297 - 1181336 + | Sel1-like TERM 1144 1181386 - 1181408 + F 71 -12.8 -2.66979 | overlap 1181379 1181385 TGGATGCGGAGCCGT GCTCTAGTTC CGA GGACTAGAGC CTTCTCGCTTCTGAT TERM 1145 1182728 - 1182751 + G 78 -11.8 -3.73775 | TTTGATCCGCGTGAC CTTAACTGCG ATGC CGCAGTTGAG TTTCCTCCGCATACC Nham_1054 1181525 - 1183729 + | lipopolysaccharide biosynthesis protein Nham_1055 1183745 - 1184668 + | glycosyl transferase family protein Nham_1056 1184942 - 1186192 + | hypothetical protein Nham_1057 1187698 - 1186397 - | UDP-glucose 6-dehydrogenase Nham_1058 1188838 - 1187771 - | dTDP-glucose 4,6-dehydratase TERM 1146 1188473 - 1188492 + g 74 -10 -3.72576 | gap 1, overlap 1188472 TTTCTCAGGCGACAG CG-TGCGCC AAT GGCGCAGCG TTTCCTGAAGGAGGG Nham_1059 1189739 - 1188864 - | glucose-1-phosphate thymidylyltransferase TERM 1147 1189479 - 1189495 + g 74 -5.8 -4.42653 | gap 1, opp_overlap 1189456, overlap 1189478 GACGATGAAGGCGTC CGCCAGC CCGC GC-GGCG TTTTCTGCGTGGCAT TERM 1148 1190367 - 1190342 - g 72 -13.9 -2.70932 | CTTGTCGGCCAAGGA CGCCGGCGCGC CGCT GCTCGCCGACG TAAAAAACCTTCCGG Nham_1060 1189845 - 1190399 + | dTDP-4-dehydrorhamnose 3,5-epimerase Nham_1061 1190399 - 1191313 + | dTDP-4-dehydrorhamnose reductase TERM 1149 1191329 - 1191353 + T 78 -11.5 -3.69359 | opp_overlap 1191324 GTGATTAGAACCTTT CCGCTTCTGAT GGA ATCAGAAGAGG TTCTATGATTTTGAT Nham_1062 1193789 - 1191438 - | glycosyl transferase family protein TERM 1150 1192303 - 1192292 - G 70 -7.2 -4.08706 | GGCGCAGGAGAGAAA CGCG GTCG CGCG TCGGGATGATCACGG Nham_1063 1196248 - 1193792 - | glycosyl transferase family protein Nham_1064 1197301 - 1196408 - | hypothetical protein Nham_1065 1197783 - 1197553 - | hypothetical protein TERM 1151 1199081 - 1199103 + G 100 -4.8 -5.44119 | opp_overlap 1199073 1199071, overlap 1199077 1199071 GAAATCATCAGTGCC GGAGACACCG GCG TGCTGTTTCC TTTTTTTGCGGTCGA Nham_1066 1198046 - 1199407 + | glycosyl transferase, group 1 Nham_1067 1200262 - 1199513 - | HAD family hydrolase Nham_1068 1200633 - 1200905 + | hypothetical protein TERM 1152 1201156 - 1201131 - f 89 -3.9 -5.59357 | overlap 1201133 ACGAGATCAAAAAAA GAGCCATCCGC TTTC GAGAATGGCTT GAAGGCGAAGCTGGA TERM 1153 1201154 - 1201133 - f 74 -6.5 -4.42962 | overlap 1201131 GAGATCAAAAAAAGA GCCATCCGC TTTC GAGAATGGC TTGAAGGCGAAGCTG Nham_1069 1201525 - 1201743 + | hypothetical protein TERM 1154 1202124 - 1202111 - g 82 -3.1 -5.20333 | CACGGAGAACAAAAA TGACG GCTC CATCA TCAAAGGGTGTGGCC Nham_1070 1202110 - 1202535 + | PadR-like family transcriptional regulator TERM 1155 1203190 - 1203135 - T 83 -14.9 -2.84841 | opp_overlap 1203153 1203162, overlap 1203158 1203159 1203162 TCGGAAGAAAATGGA TGCGCGGGGCATAGCGGTCGAA-AGCG AGTT CGTTCTTCGACGGCTATGCC-CGCCCA TGGCGCCGAAGCACG Nham_1071 1204184 - 1203366 - | formate/nitrite transporter TERM 1156 1204390 - 1204427 + r 100 -14.9 -3.80625 | gap 1, opp_overlap 1204392 1204411 GCACGCGGCCGATCA GATCGCGAGCGACGCCGC AAA GCG-CGTCGCTGCCGATC TTTCGCTTGTCCGGA TERM 1157 1204425 - 1204392 - R 70 -11.7 -2.78463 | gap 1, opp_overlap 1204390, overlap 1204411 ACGCGGCCGATCAGA TCGCGAGCGACGCCGC AAA GCG-CGTCGCTGCCGA TCTTTCGCTTGTCCG Nham_1072 1207718 - 1204455 - | tetratricopeptide TPR_2 TERM 1158 1206246 - 1206220 - G 76 -10.1 -3.94184 | gap 1, opp_overlap 1206220 1206227 AGATTGAAGAGGAAA CGCTCGGCCGCG AGTG CGCGGAC-AGCG TTGTCGGGGTTGTCA TERM 1159 1207537 - 1207554 + g 83 -6.3 -4.86731 | opp_overlap 1207518, overlap 1207518 CCCCACGACGTGGCC TCTTTCG TGGG CGAGAGA TTTTCTTTCGCGGGG TERM 1160 1208058 - 1208045 - R 72 -9.5 -3.74251 | TAGAGTGCCACGAAA CGGCG ACAG CGCCG ATGTGCATGCCGTAG Nham_1073 1208805 - 1208518 - | hypothetical protein TERM 1161 1208545 - 1208566 + g 70 -7.9 -4.08216 | TCCCCTCGTTATCGC CGCGTCGAG CAGT TTCGTCGCG TTTTCGACAGCCTGC Nham_1074 1209701 - 1209096 - | hypothetical protein Nham_1075 1210144 - 1211130 + | 2-nitropropane dioxygenase, NPD TERM 1162 1211193 - 1211180 - T 70 -3.7 -4.56597 | opp_overlap 1211183, overlap 1211181 1211182 CGGCGCTTTCAAAAA GCGTC AGCC GTCGC GGCCGATATGCTTGT Nham_1076 1212577 - 1211183 - | hypothetical protein TERM 1163 1211718 - 1211680 - G 78 -14.4 -3.09492 | opp_overlap 1211707 1211716 1211717, overlap 1211656 1211655 CGCCGAAGCGGAATA CGCTCGCAGCCGCGCCAG CCT CGACCTCGGCCGCGAGCG CCGTCAGTTCGTCGA TERM 1164 1211879 - 1211923 + g 70 -10 -3.60805 | gap 1 GCGATAGGTCTCGAT CTCGATCACGCGTTGCGCCAG CGCG CCGGCGCGATCCG-GATTGAG TTTGCGGTCGACTAT Nham_1077 1212864 - 1212652 - | SlyX Nham_1078 1213624 - 1212857 - | rhodanese-like protein TERM 1165 1213568 - 1213549 - G 70 -10.6 -3.66095 | overlap 1213537 AAAGCCCGACGCAAA GCGCGCGC AGCG GCTCGCGC ACCTCGCGAAAATCC TERM 1166 1213827 - 1213852 + r 70 -11.8 -2.79273 | opp_overlap 1213828, overlap 1213826 1213830 1213847 TTGCCGCACAAAAAA AGACCGGCCC CCGCAA GGGCCGGTCC GTTATGTTAAAACGC TERM 1167 1213851 - 1213828 - R 100 -16 -5.60993 | opp_overlap 1213827 1213826 1213830 1213847 TGCCGCACAAAAAAA GACCGGCCCC CGCA AGGGCCGGTC CGTTATGTTAAAACG Nham_1079 1214098 - 1213883 - | CsbD-like TERM 1168 1214244 - 1214209 - R 88 -11.3 -4.25104 | gap 1, opp_overlap 1214207 1214206 1214210, overlap 1214210 TTCCCGGGAGGAAAA GTCATGAGCGG-TTGC AAGGA GCAATCCGCTCATGAT GGATTTGATACTGGT TERM 1169 1214243 - 1214210 - R 83 -14.8 -3.14848 | gap 1, opp_overlap 1214207 1214206 1214210, overlap 1214209 TCCCGGGAGGAAAAG TCATGAGCGG-TTGC AAGGA GCAATCCGCTCATGA TGGATTTGATACTGG TERM 1170 1214210 - 1214243 + r 78 -14.8 -2.68775 | gap 1, opp_overlap 1214210 1214209, overlap 1214207 1214206 TCCCGGGAGGAAAAG TCATGAGCGG-TTGC AAGGA GCAATCCGCTCATGA TGGATTTGATACTGG Nham_1080 1216396 - 1214300 - | methyl-accepting chemotaxis sensory transducer TERM 1171 1214849 - 1214861 + g 78 -10.5 -4.08216 | AGTGATCCGCTGGTC GGCGC TAT GCGCC TTTTGCGCCGCGTCG TERM 1172 1216530 - 1216549 + H 75 -10.6 -3.71794 | opp_overlap 1216531, overlap 1216531 GCATAGTGACGAGAG AGGCCCGC GGTT GCGGGCCA TTTGAATCGTTCAGT TERM 1173 1216531 - 1216548 + H 80 -14.1 -2.82595 | opp_overlap 1216531, overlap 1216530 CATAGTGACGAGAGA GGCCCGC GGTT GCGGGCC ATTTGAATCGTTCAG TERM 1174 1216548 - 1216531 - H 82 -14.1 -2.95774 | opp_overlap 1216531 1216530 CATAGTGACGAGAGA GGCCCGC GGTT GCGGGCC ATTTGAATCGTTCAG TERM 1175 1217787 - 1217834 + G 71 -12.6 -3.01712 | gap 1, overlap 1217828 CGGCTACGCTGACGC TTGCCGACGCCGCCACTTCGCGC GTG GCGCG-GGTGCCGCTGTCGGCGC TGTTCAGCCAGGGCG Nham_1081 1216916 - 1218040 + | secretion protein HlyD Nham_1082 1218055 - 1221189 + | acriflavin resistance protein TERM 1176 1221668 - 1221704 + G 79 -9.4 -4.20516 | gap 1, overlap 1221673 AGGCGCCGGACGTAC CGCTGGCGTCGCTGTGC ACAT GCACGGCGATGAT-GCG TTTCTTCCATCCGCA Nham_1083 1221208 - 1221819 + | TetR family transcriptional regulator Nham_1084 1223416 - 1221902 - | glycosyl transferase family protein TERM 1177 1222898 - 1222887 - G 80 -5.8 -4.7173 | CACCAGACGCAAAAA GCTG CAAA CAGC AAAGTCGCGAGAACG TERM 1178 1225228 - 1225254 + G 74 -9.2 -3.96148 | AACCTCATCATCTTC GGGCAGGGCGCG ATC CGCGCGCATCCC TTTCTGCTGCAGGAG fadE 1223881 - 1226151 + | acyl-CoA dehydrogenase TERM 1179 1226617 - 1226594 - g 75 -11.6 -3.66908 | opp_overlap 1226593 1226591 1226594, overlap 1226590 CGTTGCGAAAATCAA GGCGATCGCG AAAG CGCGGCCGCC CTATTTCAAGCCGAT TERM 1180 1226696 - 1226709 + G 76 -8.1 -4.11216 | opp_overlap 1226680, overlap 1226681 GGGCCAGACCGCCGA GGTGG TCGG CCACC TTTTCGGCATCACCC Nham_1086 1226151 - 1227434 + | acetyl-CoA acetyltransferase Nham_1087 1227442 - 1229532 + | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding Nham_1088 1229578 - 1230042 + | thioesterase superfamily protein TERM 1181 1230284 - 1230328 + G 81 -9.9 -4.18908 | overlap 1230285 ATCATCGAAGTCGGT TCGGAATCCGCCGGCATTGTG GTG CGCGATCGCGCCGGGTTCCGG TTCTTTTCGGCCTCT Nham_1089 1230206 - 1230490 + | hypothetical protein TERM 1182 1231856 - 1231911 + G 80 -14.7 -3.14683 | gap 3, overlap 1231891 GCTGGACCGCGAAGG CGCCGCTGCCGG-GCGGCGACATGGCCG TGC CGG-CG-GTCGCGGCGCTGACGGCGGCG TTGATGCGCGACTAT glpD 1230688 - 1232232 + | glycerol-3-phosphate dehydrogenase Nham_1091 1232931 - 1232341 - | hypothetical protein TERM 1183 1232565 - 1232597 + g 86 -4.8 -5.1287 | gap 1, overlap 1232565 TCACGTAATCCGTCG CC-TTGGCGAGGCGC TGCT GCAACTCGTCAAAGG TTTTTTCCGTATCCG TERM 1184 1232940 - 1232976 + r 100 -16.6 -4.88067 | opp_overlap 1232961, overlap 1232941 GCCGCATGCCGCAAC CTCCGCCATGGCCGGA ATAAA TCCAGCCATGGCGGAA TTTTTGTCGATCGCT TERM 1185 1232941 - 1232975 + r 100 -20.1 -3.52117 | opp_overlap 1232961, overlap 1232940 CCGCATGCCGCAACC TCCGCCATGGCCGGA ATAAA TCCAGCCATGGCGGA ATTTTTGTCGATCGC Nham_1092 1234343 - 1233039 - | lytic murein transglycosylase TERM 1186 1234159 - 1234190 + g 72 -4.5 -4.60487 | gap 3, opp_overlap 1234153, overlap 1234176 ACCATGTAAGGCGCG GCC-GCGCTGATCGCG CGC TGCGA-CA-CGCCGGC TTTTTGCGCGTCCTG TERM 1187 1234386 - 1234376 - H 77 -8.2 -4.3739 | opp_overlap 1234377, overlap 1234377 CATGGCCGGACAAAA GCGC GAA GCGC GTCTTCGCGAAGATA TERM 1188 1234949 - 1234979 + G 100 -8.9 -5.27335 | gap 1, opp_overlap 1234941, overlap 1234950 TAAAGAAGGGATGTT CCCGCGTC-GCGCG ATAT CGAGCCGACGCGGC TTTTTGTTTGCAGCA TERM 1189 1234950 - 1234978 + G 78 -12.4 -3.75678 | gap 1, opp_overlap 1234941, overlap 1234949 AAAGAAGGGATGTTC CCGCGTC-GCGCG ATAT CGAGCCGACGCGG CTTTTTGTTTGCAGC Nham_1093 1234944 - 1236221 + | twin-arginine translocation pathway signal Nham_1094 1236208 - 1236774 + | cytochrome c, class I TERM 1190 1236847 - 1236824 - f 83 -11.7 -3.93038 | CACTCCAACACCAAA CGGCCACCG TAACGG CAGTGGCCG GCCGGCGTGCGCCAG Nham_1095 1237107 - 1238216 + | transposase, IS4 Nham_1096 1239844 - 1238393 - | XRE family transcriptional regulator TERM 1191 1239764 - 1239821 + g 80 -5.9 -4.68424 | overlap 1239766 TCCCTCCGCGATCTG GGTCTGCGACAGCCCGAGCTGCTGGCG GATG CGACGGAAGCGCGGCCCGACGAAGAGC TTTTTGCCTGAATTG Nham_1097 1240012 - 1241319 + | isocitrate lyase Nham_1098 1241332 - 1241538 + | hypothetical protein TERM 1192 1241569 - 1241614 + F 100 -21.9 -3.53091 | opp_overlap 1241561 1241573 1241577, overlap 1241570 1241577 ACAAGAAGCGTCCAA GGAACGGACGGCCCTGCCCGG GAGA TCGGGCGGGGCCGTTTGTTCG TTTGGGGACAGGGAT TERM 1193 1241570 - 1241613 + F 100 -25.4 -2.71712 | opp_overlap 1241561 1241573 1241577, overlap 1241569 1241577 CAAGAAGCGTCCAAG GAACGGACGGCCCTGCCCGG GAGA TCGGGCGGGGCCGTTTGTTC GTTTGGGGACAGGGA TERM 1194 1241610 - 1241573 - f 83 -14 -3.3482 | opp_overlap 1241570 1241569 1241577, overlap 1241561 1241577 GAAGCGTCCAAGGAA CGGACGGCCCTGCCCG GGAGAT CGGGCGGGGCCGTTTG TTCGTTTGGGGACAG TERM 1195 1241606 - 1241577 - f 87 -17.8 -2.60244 | opp_overlap 1241570 1241569 1241577, overlap 1241561 1241573 CGTCCAAGGAACGGA CGGCCCTGCCCG GGAGAT CGGGCGGGGCCG TTTGTTCGTTTGGGG TERM 1196 1241577 - 1241606 + F 100 -20.7 -4.39696 | opp_overlap 1241561 1241577 1241573, overlap 1241570 1241569 CGTCCAAGGAACGGA CGGCCCTGCCCGG GAGA TCGGGCGGGGCCG TTTGTTCGTTTGGGG TERM 1197 1241829 - 1241805 - g 81 -13.5 -3.54424 | opp_overlap 1241805, overlap 1241806 CGGGAGCGGCGGAAA CCGCGAAGCCG GTG CGGCTGCGCGA TGCGTTGCGACAGGC TERM 1198 1241828 - 1241806 - g 75 -14.8 -2.72511 | opp_overlap 1241805, overlap 1241805 GGGAGCGGCGGAAAC CGCGAAGCCG GTG CGGCTGCGCG ATGCGTTGCGACAGG Nham_1099 1241765 - 1242322 + | hypothetical protein Nham_1100 1243504 - 1242353 - | glucose sorbosone dehydrogenase Nham_1101 1244750 - 1243980 - | glutathione S-transferase-like TERM 1199 1244782 - 1244792 + H 75 -5.4 -4.57569 | AGCCGGAAACTGCCG CCAT CCG ATGG TTTTTCGGAAAATCA TERM 1200 1245250 - 1245270 + H 80 -9.7 -4.13767 | opp_overlap 1245227 CCCCACATCCGTACG GCGGCAAAG ACG CTTTGCAGC TTTTCGAATCCCACA TERM 1201 1247431 - 1247417 - g 73 -7.1 -4.26903 | CCTATGCCACCAAAA CCTCG GACCT CGAGG AGGCCTGCAAGCGGA Nham_1103 1246273 - 1247475 + | aspartate aminotransferase Nham_1104 1247830 - 1248390 + | hypothetical protein TERM 1202 1248409 - 1248430 + F 100 -17.3 -5.66989 | GATCGGACGACCGAG GAGGCCCGC GACA GCGGGCCTC TTTTTTTGGTGTTTA Nham_1105 1248571 - 1249053 + | hypothetical protein TERM 1203 1249861 - 1249879 + G 72 -7.3 -4.21194 | opp_overlap 1249846 CGGCGGCGATCTCGA CCGCGAG AAGGA CGCGCGG TTTTCGATGCTGGAG TERM 1204 1250082 - 1250062 - g 73 -12.5 -3.14132 | overlap 1250078 GCTGCGGCTGATGAA GGCGCTGCG GCA CGAAGCGCC CGGCATCGGCGAGAC Nham_1106 1249199 - 1251298 + | elongation factor G TERM 1205 1251345 - 1251373 + F 78 -14.1 -2.62616 | opp_overlap 1251351 1251365, overlap 1251351 ATGGTCGTCTTGCCA TGACAATGATGTA TAA TGCATCATTGTCA TGATCTCAAACATCA Nham_1107 1251420 - 1251695 + | XRE family transcriptional regulator TERM 1206 1252768 - 1252740 - g 74 -14.6 -2.54574 | opp_overlap 1252733 1252743 1252760 1252765, overlap 1252739 1252737 GACCGCAACCAACAT CCGCG-CCGGCGCC CGC GGC-CCGGTCGCGG GGATGCTGCATTCGG TERM 1207 1253285 - 1253334 + G 78 -4.8 -4.72272 | gap 1, overlap 1253296 1253297 1253298 TCGACTCCACGGCGG CGAACGCCATCAGCCGTGTCGCC GCCAA GGCGCGGCGGCAGGGGGT-TTCG TTTTTCATCACCGGC TERM 1208 1253296 - 1253329 + G 71 -5.8 -4.35327 | overlap 1253285 1253297 1253298 GCGGCGAACGCCATC AGCCGTGTCGCCGC CAAGGC GCGGCGGCAGGGGG TTTCGTTTTTCATCA Nham_1108 1251751 - 1253502 + | sulphate transporter TERM 1209 1254329 - 1254313 - g 71 -10.8 -3.53091 | ATGTGCCGCTGGAAA CGCCGC TGCTT GCGGCG GCGAGGGCGCGGGGC Nham_1109 1253631 - 1254488 + | shikimate 5-dehydrogenase TERM 1210 1254642 - 1254671 + G 78 -10.5 -4.07885 | opp_overlap 1254646, overlap 1254643 CCCGAAGCTACGCAG ACCACGCCGCTCG GCCT CGCGCGGCGCGGC TTTTGCGGCCGGGTC TERM 1211 1254643 - 1254670 + G 75 -14 -3.04517 | opp_overlap 1254646, overlap 1254642 CCGAAGCTACGCAGA CCACGCCGCTCG GCCT CGCGCGGCGCGG CTTTTGCGGCCGGGT Nham_1110 1254564 - 1254920 + | hypothetical protein TERM 1212 1255329 - 1255302 - g 72 -13.4 -2.73875 | opp_overlap 1255299, overlap 1255299 TGGTGCTGAACATGA TCGACATCGCGC GGCG GCGCGGCGTCGA CATTGATCTCGACAA Nham_1111 1254917 - 1256797 + | ferrous iron transport protein B TERM 1213 1256859 - 1256909 + T 75 -8.5 -4.0371 | gap 2, overlap 1256863 1256864 ATCCGGTGGCTCGAT CG-TCA-GCCAGAGTCTGTTTCAAC TGC GTTGAATCAGACTCTGGCCTTATCC TTTCTATCGAGCATG TERM 1214 1256863 - 1256903 + T 100 -19.9 -3.67102 | overlap 1256859 1256864 GGTGGCTCGATCGTC AGCCAGAGTCTGTTTCAAC TGC GTTGAATCAGACTCTGGCC TTATCCTTTCTATCG TERM 1215 1256864 - 1256902 + T 100 -23.4 -2.79538 | overlap 1256863 1256859 GTGGCTCGATCGTCA GCCAGAGTCTGTTTCAAC TGC GTTGAATCAGACTCTGGC CTTATCCTTTCTATC Nham_1112 1258111 - 1256966 - | L-lactate dehydrogenase (cytochrome) TERM 1216 1258286 - 1258264 - H 72 -9.2 -3.70902 | overlap 1258265 CGCGTTACACCTAAA GCCTTCTGAT GGA ATCAGAAGGG GGCTCTACGATTTTG TERM 1217 1258285 - 1258265 - H 73 -12.7 -2.82327 | overlap 1258264 GCGTTACACCTAAAG CCTTCTGAT GGA ATCAGAAGG GGGCTCTACGATTTT Nham_1113 1258421 - 1258585 + | hypothetical protein TERM 1218 1258653 - 1258663 + F 74 -8.2 -4.1721 | opp_overlap 1258653 ATTCCCATCGCAAAA GCGG CAT CCGC TTTTGCGATATACCT TERM 1219 1258663 - 1258653 - f 74 -8.2 -4.13945 | opp_overlap 1258653 ATTCCCATCGCAAAA GCGG CAT CCGC TTTTGCGATATACCT Nham_1114 1258947 - 1260293 + | phosphoglucosamine mutase Nham_1115 1260433 - 1261680 + | major facilitator transporter TERM 1220 1261678 - 1261719 + F 74 -6.2 -4.45696 | gap 3, overlap 1261678 1261682 1261684 1261687 AAAATCCGGCACGGG TAGAGCGTTTCCGCTTCTGAT GGA ATCAGAAGCG--AG-GCTCTA TGTTTTTTATTTGGC TERM 1221 1261678 - 1261721 + F 93 -5.4 -5.63517 | gap 1, overlap 1261678 1261682 1261684 1261687 AAAATCCGGCACGGG TAGAGCGTTTCCGCTTCTGAT GGA ATCAGAAGCG-AGGCTCTATG TTTTTTATTTGGCGC TERM 1222 1261682 - 1261717 + F 72 -8.4 -3.80772 | gap 1, overlap 1261678 1261678 1261684 1261687 TCCGGCACGGGTAGA GCGTTTCCGCTTCTGAT GGA ATCAGAAGCG-AGGCTC TATGTTTTTTATTTG Nham_1116 1261982 - 1262854 + | hypothetical protein TERM 1223 1262882 - 1262904 + F 100 -14.8 -5.83211 | overlap 1262883 CTTAATAGTTCTTAA CGGCGCGGGA GTT TCCCGCGCCA TTTTTTCTTTTGGTG TERM 1224 1262883 - 1262903 + F 100 -18.3 -4.07486 | overlap 1262882 TTAATAGTTCTTAAC GGCGCGGGA GTT TCCCGCGCC ATTTTTTCTTTTGGT Nham_1117 1263065 - 1263889 + | hypothetical protein Nham_1118 1264500 - 1265672 + | phosphoserine aminotransferase TERM 1225 1265678 - 1265703 + F 71 -11.1 -3.28791 | overlap 1265681 GGCGGCGTGATCTTC CCACCCTTCCC TTGA GGGGAGGGTCG TTATGCCGAAGGCAT Nham_1119 1265834 - 1267423 + | D-3-phosphoglycerate dehydrogenase Nham_1120 1267902 - 1267429 - | hypothetical protein Nham_1121 1268032 - 1268229 + | hypothetical protein Nham_1122 1269827 - 1268259 - | peptidase S10, serine carboxypeptidase TERM 1226 1268929 - 1268949 + g 76 -6.7 -4.49389 | overlap 1268931 ACGTCGGCCATGTCG GCGCGGGTC AGT GGTCCGCCC TTTTCCTTCTCCCGT TERM 1227 1269376 - 1269402 + g 95 -20.2 -3.15579 | GAACCGGCGATCGCG CGGTCCATGGCG ATG CGCCATGGGCCG TTGCTGCCGAATTGC TERM 1228 1270016 - 1270057 + H 100 -14.3 -3.96705 | gap 1, overlap 1270017 1270018 TCTTCGCGCCGTCGC CGCCGGACCGGGCGGGAGTC GCA GGCTGCGGCCCGG-CCTGCG TTTGGATTTTCTGGG TERM 1229 1270017 - 1270063 + H 72 -6.5 -4.3739 | overlap 1270016 1270018 CTTCGCGCCGTCGCC GCCGGAC-CGGGCGGGAGTCGCA GGC TGCGGC-CCGGCCTGCGTTTGGA TTTTCTGGGCAAATC Nham_1123 1270163 - 1271536 + | adenylosuccinate synthetase Nham_1124 1271597 - 1273153 + | hypothetical protein Nham_1125 1273415 - 1273197 - | hypothetical protein Nham_1126 1273728 - 1274279 + | hypothetical protein Nham_1127 1274561 - 1274289 - | hypothetical protein TERM 1230 1274481 - 1274502 + g 81 -4.3 -5.07486 | gap 1 CGCGGTGTCGAAACG GCG-GTAGGC AAA GCCCGCGCGC TTTTTCTTGCGGATA TERM 1231 1274852 - 1274819 - R 73 -13.1 -2.70932 | gap 1, overlap 1274831 1274832 TCGGCCTGCCAAGCA GTCTCCGCGAAACCGG AGC CCGGTTACGCGG-GGC AACGTCGGATTCAGG Nham_1128 1275294 - 1274881 - | methionine sulfoxide reductase B Nham_1129 1276038 - 1275316 - | methionine sulfoxide reductase A Nham_1130 1276486 - 1276217 - | hypothetical protein Nham_1131 1277366 - 1276491 - | UTP-glucose-1-phosphate uridylyltransferase TERM 1232 1276619 - 1276582 - G 71 -9.7 -3.72576 | overlap 1276583 TTGGCGCGCAGGAAA CCCGCGCGCGAGCCGCA GTCG TGACGCTCGCCCGCGAA TTCGAGACCGTGGAA Nham_1132 1277591 - 1279036 + | lytic murein transglycosylase TERM 1233 1279334 - 1279370 + G 72 -13.5 -2.73364 | CGATTTCGGATTCCA GCAGCAGCGTCCGGCGC ATC GCGGCGGAGGCGGCGGC TGGTTCGGCTCCGAC TERM 1234 1279538 - 1279494 - g 83 -7.5 -4.56597 | overlap 1279495 CCGCCGCCTGAAAAA CGCGACACCGTGCCCGAGCGC AAT GTGCTGGTGCTCGGCGACGCC ATGGCCGACTGGCTC TERM 1235 1279875 - 1279828 - g 78 -6.9 -4.6265 | gap 2, overlap 1279862 ACAAGAACGACAAAA CGGATGCCGCCG-C-CGCCGCCA AGCT CGACGACAAGCCGGCGGATTCCG AACTGCCGCCCGACG TERM 1236 1279943 - 1279930 - g 72 -3.7 -4.5442 | overlap 1279931 CCGCCAAGGAGAAAA GCGCG CGCT CGCCC AGCGGAGTCGCCGAA TERM 1237 1280787 - 1280801 + G 83 -7.1 -4.83615 | CGCCCGCCCGCCAAT TCCGG ACCGG CCGGA TTTTTCTCGGACCTG Nham_1133 1279209 - 1280828 + | hypothetical protein Nham_1134 1281234 - 1280881 - | hypothetical protein Nham_1135 1282753 - 1281644 - | transposase, IS4 TERM 1238 1283040 - 1283064 + r 79 -5.5 -4.74504 | opp_overlap 1283037 1283035 1283040 GCGGCAGGAACAGGA GCCACGCGCCC CGT GCGCGGATGGC TTTTTCCCTTGGCCT gltD 1285003 - 1283549 - | glutamate synthase subunit beta TERM 1239 1284866 - 1284893 + g 81 -9.8 -4.18018 | gap 1, overlap 1284870 GATGCCGCAGTTCAT GCAG-CGCGCGGC CTG GTCGCGCGTCTCC TTTTCGGTAAGCGGA TERM 1240 1284870 - 1284888 + g 76 -13.8 -3.11281 | overlap 1284866 CCGCAGTTCATGCAG CGCGCGGC CTG GTCGCGCG TCTCCTTTTCGGTAA Nham_1138 1289847 - 1285084 - | glutamate synthase (ferredoxin) TERM 1241 1287853 - 1287885 + g 70 -12 -3.14344 | gap 2 GATGATGTTGACACC CTC-GCGCAC-CGCGG CTT CCGCGCGCGCGCAGAG TTCGTCGAGCACCTG TERM 1242 1289530 - 1289514 - G 95 -2.1 -5.75342 | overlap 1289515 TGCGCGCAAAAAAAA CGTGCGG AAT CTGCACC AGAATGCCCGCGCCG TERM 1243 1290119 - 1290097 - R 74 -11.4 -3.55563 | AGCTGACTGTCGAAA TTAAGACAGC CTT GCTGTCCTAA CCGTGACACTGCCAA TERM 1244 1290435 - 1290403 - R 100 -19.9 -4.1899 | overlap 1290408 1290423 GGACGCCATTCAAAA CAAAAGCGCCCCGGC AAA ACCGGGGCGCTTCCG CATCCGACAACCGTA TERM 1245 1290430 - 1290408 - R 100 -18.4 -5.10933 | overlap 1290403 1290423 CCATTCAAAACAAAA GCGCCCCGGC AAA ACCGGGGCGC TTCCGCATCCGACAA Nham_1139 1290928 - 1290467 - | heat shock protein Hsp20 TERM 1246 1290960 - 1290984 + H 72 -8.4 -3.91196 | overlap 1290962 GAGCGACATTGAGTG GACCCGCCCG CCAAT CGGGCCGGGC TTTCGTCTGTGTGCA Nham_1140 1291152 - 1292096 + | alpha/beta hydrolase fold Nham_1141 1293044 - 1292217 - | histidinol-phosphate phosphatase, putative, inositol monophosphatase TERM 1247 1293417 - 1293442 + r 100 -16.9 -5.48213 | TTCCTCCCTAGACTT GGGCCGCTTGT TTTG ACGAGCGGCCC TTTTTCTTTTCCGTC Nham_1142 1294423 - 1293536 - | N-formylglutamate amidohydrolase TERM 1248 1293627 - 1293655 + g 79 -13.7 -3.43071 | overlap 1293653 TCCGTTGCAACCTGC CGGAAGCGCGGGC CGC GCTCGCGCCGCCG TTCGTTCATGTAGAC Nham_1143 1294608 - 1294967 + | response regulator receiver domain-containing protein TERM 1249 1295148 - 1295190 + T 72 -5.5 -4.431 | gap 2, opp_overlap 1295159, overlap 1295150 1295159 1295172 GTCATTGTATAGAGA CC--GATAGGAAAGGCCCGCC GTT GGCGGGGCTTTCCGGCCCTGG TTTTGTGGGTGGCTG TERM 1250 1295150 - 1295186 + T 71 -12.9 -2.50791 | opp_overlap 1295159, overlap 1295148 1295159 1295172 CATTGTATAGAGACC GATAGGAAAGGCCCGCC GTT GGCGGGGCTTTCCGGCC CTGGTTTTGTGGGTG TERM 1251 1295159 - 1295177 + T 74 -11.6 -3.54919 | opp_overlap 1295159, overlap 1295150 1295148 1295172 GAGACCGATAGGAAA GGCCCGCC GTT GGCGGGGC TTTCCGGCCCTGGTT TERM 1252 1295177 - 1295159 - T 81 -11.6 -3.85539 | opp_overlap 1295159 1295150 1295148 1295172 GAGACCGATAGGAAA GGCCCGCC GTT GGCGGGGC TTTCCGGCCCTGGTT Nham_1144 1295576 - 1295229 - | hypothetical protein Nham_1145 1297434 - 1295785 - | recombinase Nham_1146 1297931 - 1297431 - | putative bacteriophage-related protein Nham_1147 1298345 - 1297935 - | hypothetical protein TERM 1253 1299329 - 1299345 + r 93 -8.7 -4.8667 | CATGTTTTCCCCGTG CCTCATC GTC GGTGAGG TTTTTGTACGGTGTG TERM 1254 1300368 - 1300402 + r 74 -13.5 -2.70143 | gap 1, overlap 1300375 1300383 1300385 CACCAATGTCTTCAT GC-CCGCGCTCGCCGC GGCA GCGGCGATCGCGCCGC TCGTCTCGTTGCCGT Nham_1149 1302947 - 1302150 - | hypothetical protein Nham_1150 1305918 - 1303342 - | DEAD/DEAH box helicase-like Nham_1151 1306894 - 1305920 - | hypothetical protein TERM 1255 1306837 - 1306850 + g 73 -6.7 -4.27512 | opp_overlap 1306837, overlap 1306833 GGATACGCGACGACA GGACT GACC AGTCC TTCTTTATTATCGCC TERM 1256 1307595 - 1307623 + r 75 -10.1 -3.6682 | opp_overlap 1307599, overlap 1307596 1307599 ATTGCGGCCACGCAC AAAACCCGCCGGG CAT CCCGGCGGGTAAG TTTCAGTAACTGAAG TERM 1257 1307596 - 1307622 + r 76 -13.6 -2.79878 | opp_overlap 1307599, overlap 1307595 1307599 TTGCGGCCACGCACA AAACCCGCCGGG CAT CCCGGCGGGTAA GTTTCAGTAACTGAA TERM 1258 1307599 - 1307619 + r 95 -19.7 -2.66451 | opp_overlap 1307599, overlap 1307596 1307595 CGGCCACGCACAAAA CCCGCCGGG CAT CCCGGCGGG TAAGTTTCAGTAACT TERM 1259 1307619 - 1307599 - R 100 -19.7 -4.42386 | opp_overlap 1307599 1307596 1307595 CGGCCACGCACAAAA CCCGCCGGG CAT CCCGGCGGG TAAGTTTCAGTAACT Nham_1152 1307983 - 1307648 - | PRC-barrel protein Nham_1153 1309078 - 1308251 - | signal transduction histidine kinase Nham_1154 1309214 - 1309543 + | hypothetical protein Nham_1155 1309570 - 1309947 + | ISSpo6, transposase orf A TERM 1260 1310330 - 1310306 - g 76 -5.5 -4.63542 | opp_overlap 1310306 1310316 1310319, overlap 1310296 1310289 GAGAAGGCCGAAAAA GCCATCCGCGC ACG GGGCGCGTGGC TCCTGTTCCTGCCGC Nham_1156 1309994 - 1310524 + | ISSpo6, transposase OrfB Nham_1157 1311091 - 1310552 - | hypothetical protein TERM 1261 1311301 - 1311322 + r 82 -8.6 -4.42238 | opp_overlap 1311293 1311300, overlap 1311300 GGACACACAGCGAAG CCGCCAGC CACTGA GCCGGCGG TTTTCGTTCGGCTAG Nham_1158 1312952 - 1312692 - | hypothetical protein TERM 1262 1313181 - 1313167 - H 100 -12.8 -5.26119 | opp_overlap 1313162 CCCTGAAAAAGAAAA CCCGGC ACC GCCGGG CTCCCCTTTTGCCAA Nham_1160 1314382 - 1316163 + | hypothetical protein TERM 1263 1317175 - 1317144 - g 73 -13 -3.21099 | opp_overlap 1317150, overlap 1317150 TTTCGCCAGCACGAA CCAGAAGGACAACG CGAC CGGCGTCCTCCTGG TATCGCATGCCCTCC Nham_1161 1316248 - 1319736 + | hypothetical protein Nham_1163 1322064 - 1321120 - | hypothetical protein TERM 1264 1321684 - 1321708 + g 70 -7.7 -4.07885 | GACGTCGGTCGGGCA GGAGGCCTTGA GGC TCGCGGCCGCC TTTTCCGAGGCGCTG Nham_1164 1322715 - 1322101 - | hypothetical protein TERM 1265 1322304 - 1322330 + g 70 -11.6 -3.1875 | CGAGCGCCGCCTTGG TCCTCAGTGCAC CGT GTGTACTGCGGA TTGCGTTGACGTGTG Nham_1165 1324643 - 1323570 - | signal transduction histidine kinase Nham_1167 1326090 - 1325236 - | integrase catalytic subunit Nham_1168 1326403 - 1326173 - | transposase and inactivated derivative Nham_1169 1326695 - 1326895 + | cold-shock DNA-binding domain-containing protein Nham_1170 1327076 - 1328206 + | fatty acid desaturase TERM 1266 1328300 - 1328246 - f 86 -14.3 -3.21695 | gap 1, opp_overlap 1328248 1328249 1328250 1328293, overlap 1328250 TGACCAGTAACGGAA TCCACGTCGGAGTGGGGTCACGGTCG GCGC CGATCGTGACCTCACTCCGAT-CGGC TTTTTTCGATTGTCT TERM 1267 1328248 - 1328300 + F 100 -20 -5.20154 | gap 1, opp_overlap 1328246 1328250, overlap 1328249 1328250 1328293 ACCAGTAACGGAATC CACG-TCGGAGTGGGGTCACGGTCG GCGC CGATCGTGACCTCACTCCGATCGGC TTTTTTCGATTGTCT TERM 1268 1328249 - 1328299 + F 100 -23.5 -3.70465 | gap 1, opp_overlap 1328246 1328250, overlap 1328248 1328250 1328293 CCAGTAACGGAATCC ACG-TCGGAGTGGGGTCACGGTCG GCGC CGATCGTGACCTCACTCCGATCGG CTTTTTTCGATTGTC TERM 1269 1328298 - 1328250 - f 100 -22.6 -2.57489 | gap 1, opp_overlap 1328249 1328248 1328250 1328293, overlap 1328246 CAGTAACGGAATCCA CG-TCGGAGTGGGGTCACGGTCG GCGC CGATCGTGACCTCACTCCGATCG GCTTTTTTCGATTGT TERM 1270 1328250 - 1328298 + F 100 -27 -2.81195 | gap 1, opp_overlap 1328250 1328246, overlap 1328249 1328248 1328293 CAGTAACGGAATCCA CG-TCGGAGTGGGGTCACGGTCG GCGC CGATCGTGACCTCACTCCGATCG GCTTTTTTCGATTGT Nham_1172 1329019 - 1330209 + | NADH dehydrogenase subunit D TERM 1271 1331689 - 1331745 + T 77 -13.6 -2.91032 | gap 2, overlap 1331698 AGATGTAAGTGGAGG CGGTTCGCTGGTCGCGCGGCGCCGAAGG CCG CGTTCCGCGCCGCGC--CCAGCGTCGCG TGATCTTGTTCTTCT TERM 1272 1331698 - 1331750 + T 86 -11.7 -4.02817 | overlap 1331689 TGGAGGCGGTTCGCT GGTCGCGCGGCGCCGAAGGCCGCGT TCC GCGCCGCGCCCAGCGTCGCGTGATC TTGTTCTTCTGGCCG Nham_1175 1332342 - 1331794 - | hypothetical protein TERM 1273 1332815 - 1332794 - R 95 -13.7 -3.98083 | opp_overlap 1332794 TAGCTAATGCAGAAA GGCCCAGCA ATGC TGCCGGGCC TTCTTATTCCTTGCT TERM 1274 1332794 - 1332815 + r 85 -11.5 -4.04023 | opp_overlap 1332794 TAGCTAATGCAGAAA GGCCCAGCA ATGC TGCCGGGCC TTCTTATTCCTTGCT TERM 1275 1332863 - 1332894 + r 100 -15.8 -5.06414 | gap 1, overlap 1332864 AATCCATACCTCCCA TGCCGCCGC-CCGGC ATC GCCGGAGCAGCGGCG TTTTTCTTCGGCAGC TERM 1276 1332864 - 1332893 + r 91 -17.1 -3.63367 | gap 1, overlap 1332863 ATCCATACCTCCCAT GCCGCCGC-CCGGC ATC GCCGGAGCAGCGGC GTTTTTCTTCGGCAG groEL 1334480 - 1332843 - | chaperonin GroEL TERM 1277 1333271 - 1333311 + g 70 -11.8 -3.17723 | CCTCGACCGCCGCAC GGGTCGCATGCATCGCGT CGTCC ACGCGATCCTTGCGCTCC TTCACTTCGACCTCG TERM 1278 1333990 - 1334008 + g 76 -11 -3.7108 | ACCTTCTTCATGGCG TCGGCGAG GAA CTTGCCGA TTTCCGTGTCGCCAT TERM 1279 1334610 - 1334626 + r 85 -11.5 -3.9461 | opp_overlap 1334610 1334609 1334608 AGGATTAGGAAAACT GGTCGCG CTA CGCGGCC TTCTTCTTGGCGGCG groES 1334934 - 1334617 - | co-chaperonin GroES TERM 1280 1334821 - 1334833 + g 91 -9.1 -4.41494 | GACCGCGGTGATTTC GCCCT GAG AGGGC TTTTCCTTGACCGTA Nham_1179 1335506 - 1335859 + | hypothetical protein TERM 1281 1336594 - 1336627 + T 71 -11.7 -2.8655 | AGTTCATGGGGCCAA GTTCGGCGCCGATTA ACAG TAGGAGGCGCCGAAC TGTGCTCTACATGCG Nham_1181 1339053 - 1336813 - | twin-arginine translocation pathway signal Nham_1182 1339518 - 1339066 - | (2Fe-2S)-binding Nham_1183 1340777 - 1339515 - | cytochrome c, class I TERM 1282 1340482 - 1340517 + g 74 -9.1 -3.86015 | gap 2, opp_overlap 1340469, overlap 1340477 1340484 1340486 AATGCCGCCTCCGAC CA-CGTGCC-GATGCCG GTTT CGGCATCAGGCGTGATG TTTGTCGAAAAGATA Nham_1184 1342436 - 1340955 - | Phage uncharacterized protein-like TERM 1283 1343580 - 1343561 - H 88 -13.6 -3.64103 | opp_overlap 1343561 GACCCAGACCGGAAA CGTGGCCA GCAA TGGCCACG TTGTAGGGAGGGTCT TERM 1284 1343561 - 1343580 + H 82 -13.6 -3.29263 | opp_overlap 1343561 GACCCAGACCGGAAA CGTGGCCA GCAA TGGCCACG TTGTAGGGAGGGTCT Nham_1186 1344616 - 1344903 + | hypothetical protein TERM 1285 1344911 - 1344934 + T 86 -12.4 -4.05788 | opp_overlap 1344911 GCGACTGAAACAGAA GAGGCCGTCT CACT GGGCGGCCTC TTTCATTTGCGGAAG TERM 1286 1344934 - 1344911 - T 75 -9.5 -3.84185 | opp_overlap 1344911 GCGACTGAAACAGAA GAGGCCGTC TCACTG GGCGGCCTC TTTCATTTGCGGAAG TERM 1287 1345171 - 1345205 + T 86 -14.3 -3.30124 | gap 1, overlap 1345165 TGTCTGTGGGTGCTG CGCTCCGGCGCG-CAC TGGT GTGACTTGCCGGAGCG TTATGGCAAGTGGAA Nham_1188 1346353 - 1345823 - | ISSpo6, transposase OrfB TERM 1288 1346017 - 1346041 + g 76 -5.5 -4.63542 | opp_overlap 1346014 1346012 1346017, overlap 1346033 1346039 GCGGCAGGAACAGGA GCCACGCGCCC CGT GCGCGGATGGC TTTTTCGGCCTTCTC Nham_1189 1346777 - 1346400 - | ISSpo6, transposase orf A TERM 1289 1348099 - 1348085 - H 79 -12.8 -3.36785 | opp_overlap 1348085 TCAGATCTCAATCAA CCGCGC CAT GCGCGG TCTCCTTCGCGCTTA TERM 1290 1348085 - 1348099 + H 74 -12.8 -2.91199 | opp_overlap 1348085 TCAGATCTCAATCAA CCGCGC CAT GCGCGG TCTCCTTCGCGCTTA TERM 1291 1348587 - 1348560 - H 72 -8.4 -3.86822 | gap 1, opp_overlap 1348560 1348560, overlap 1348564 GAACTGTTGGATAAA GAC-AGCAGGCCA ATT TGGCCGGCTCGCC TTGGTTGGTGAACCA Nham_1193 1349018 - 1350019 + | polysaccharide biosynthesis protein CapD Nham_1194 1350016 - 1351173 + | DegT/DnrJ/EryC1/StrS aminotransferase Nham_1195 1351245 - 1352834 + | hypothetical protein Nham_1196 1353950 - 1352898 - | N-acylneuraminate-9-phosphate synthase TERM 1292 1353763 - 1353744 - G 75 -4.2 -4.72272 | overlap 1353745 GCCCTTGATCAAAAA CTCCTCGC CATC GTGAGGAA TGGTCATCGTGTCGG Nham_1197 1354876 - 1354091 - | NUDIX hydrolase TERM 1293 1354284 - 1354308 + g 86 -15.7 -3.55761 | opp_overlap 1354275 GAATATTCACGATTC TCAAGCGCCGC GAA GCGGCGCTGGA TTTGCGCGGTCGATG TERM 1294 1354752 - 1354762 + g 78 -6.8 -4.59773 | TTGTAGAGATCGTGG GAGC GCA GCTC TTTTTCGCGCTGCCA Nham_1198 1355532 - 1354870 - | haloacid dehalogenase-like hydrolase Nham_1199 1356392 - 1355532 - | methyltransferase type 11 TERM 1295 1356007 - 1355975 - G 76 -5.6 -4.60041 | gap 1 AGCGATCGGTAAAAA CGACATC-GTATTGC GCCA GCAATCCTGACGCCG CCGAAAGTTCGAGCG Nham_1200 1356843 - 1357463 + | hypothetical protein Nham_1201 1357926 - 1358651 + | acylneuraminate cytidylyltransferase Nham_1203 1360217 - 1359354 - | IstB-like ATP-binding protein TERM 1296 1361333 - 1361320 - H 72 -6.7 -4.28361 | GTAATGGGAGGAAAA CATGG CATC CCATG CATCTCGTCGCTATG TERM 1297 1361729 - 1361701 - g 74 -2.4 -4.82901 | gap 1, overlap 1361702 CGCGTGCGAGAAAAA GTACGGCAAG-CC GATC GATCTCGCCGTAA AGAGTACCTACAACC TERM 1298 1361902 - 1361887 - g 70 -10.4 -3.56558 | GAAGATCAAGGACAA GACCGG AATC CCGGTC GGCATCGGCCTCTCC Nham_1206 1361321 - 1362661 + | twin-arginine translocation pathway signal TERM 1299 1362851 - 1362868 + G 81 -2.6 -5.1166 | opp_overlap 1362812, overlap 1362852 GACGGCATCAACCTC ATCGCC AAGGAA GGCGAA TTTTTAGTTTTGCTC Nham_1207 1362779 - 1363807 + | ABC transporter related TERM 1300 1364154 - 1364175 + G 75 -4.3 -4.78107 | GCTTATTGTTGATTT CCGCGGCAG ATGG TTGGTGCGG TTTTTGATCCTGCTG Nham_1208 1363804 - 1364748 + | binding-protein-dependent transport systems inner membrane component TERM 1301 1364794 - 1364813 + G 78 -3.4 -4.99645 | opp_overlap 1364791, overlap 1364786 1364798 TATTGCTGACAAGGC CGCTCACG CCGC CGTGCTCG TTTTCTTTGTGACCT Nham_1209 1364750 - 1365604 + | binding-protein-dependent transport systems inner membrane component TERM 1302 1366253 - 1366274 + T 75 -5.2 -4.57353 | gap 1, opp_overlap 1366242 1366240, overlap 1366256 AAGACACAAAGGTCG TG-ACGCAG CAGCT CTGCGTGCA TTTTGTCTGGTGAGG TERM 1303 1367169 - 1367198 + T 100 -15.7 -5.46698 | opp_overlap 1367167 GTTTCTCCACAACTT GCCGCCGGTGTCC TTCG GGATGCTGGCGGC TTTTTTCGTTTTAGC TERM 1304 1368171 - 1368185 + T 80 -4.9 -4.99035 | GTTTTGACGGCGTCG CTCCG GCCGG CGGGG TTTTTATCTGACTAG Nham_1211 1368446 - 1368189 - | hypothetical protein Nham_1212 1368670 - 1368506 - | hypothetical protein TERM 1305 1368865 - 1368895 + H 70 -3.8 -4.59109 | overlap 1368867 ATCTCTCATCGGCAA GCCTGAGCCAGCCG TAG CGGCTGCCTGAAAC TTTTTGGGGACTCTC Nham_1213 1368994 - 1370805 + | signal transduction histidine kinase TERM 1306 1371391 - 1371374 - f 84 -12.7 -3.64822 | ATTTCCGCATCGAAA CAGGCCG TTAT CGGCCTG TCCGGATTGACATCG rpmJ 1371524 - 1371649 + | 50S ribosomal protein L36 TERM 1307 1371702 - 1371723 + F 82 -10.1 -4.15267 | gap 1 ATCACAGCTCTTCGA CGCGCCTGCG CTT TGC-GGCGCG TTTCGTTGTATTTTT TERM 1308 1371735 - 1371779 + F 76 -7.2 -4.54727 | overlap 1371738 CGCGTTTCGTTGTAT TTTTAGCGTTTCGCTTCTGA CGGAA TCAGAAGCGGGGCTCTATGA TTTTGATTTGACGCG TERM 1309 1371738 - 1371776 + F 71 -11.1 -3.22314 | overlap 1371735 GTTTCGTTGTATTTT TAGCGTTTCGCTTCTGA CGGAA TCAGAAGCGGGGCTCTA TGATTTTGATTTGAC Nham_1215 1371883 - 1372557 + | tetratricopeptide TPR_2 Nham_1216 1372943 - 1372782 - | hypothetical protein TERM 1310 1373984 - 1374019 + G 78 -11.8 -3.80573 | gap 1 GTCGCTCGACATCCA TTCGCGCCCGTTCGCCG CGG CGGTGCCCGG-CGCGAA TTTGATCGTGCTGCC Nham_1217 1373148 - 1374176 + | alpha/beta hydrolase fold Nham_1218 1375692 - 1374256 - | pyruvate kinase Nham_1219 1376273 - 1375689 - | hypothetical protein Nham_1220 1376461 - 1376763 + | hypothetical protein Nham_1221 1376932 - 1377201 + | hypothetical protein Nham_1222 1379001 - 1377421 - | hypothetical protein TERM 1311 1377792 - 1377823 + g 75 -14.4 -2.71731 | gap 1, overlap 1377786 CGGGCGGGATCGATG CGGTCGCCGCG-ACG ATT CGTGCGCGGCGGACG TCCTTCGCCGGTGGC TERM 1312 1378123 - 1378174 + g 70 -10.1 -3.53811 | overlap 1378126 1378167 CTTCGCCCGGGGCAG CGGGACCG-GGTCGGCCGACGCAGC CGGT GCTGCGGAGGC-GACCGTGGTCTGG TTTGCCGGCCGTGCA TERM 1313 1378126 - 1378171 + g 70 -12.6 -2.90615 | overlap 1378123 1378167 CGCCCGGGGCAGCGG GACCG-GGTCGGCCGACGCAGC CGGT GCTGCGGAGGC-GACCGTGGTC TGGTTTGCCGGCCGT TERM 1314 1378510 - 1378523 + g 81 -3.8 -5.00616 | opp_overlap 1378483 GCGTTGCAGGCGAAG TCCG GCGAAA CGGA TTTTTTCGAGCGGCA TERM 1315 1379203 - 1379232 + r 93 -9.3 -4.7373 | opp_overlap 1379206, overlap 1379206 TAATGGTTAACGTTA AAAGGGCCTCATC CTGC GATGAAGCCCTTG TTTTTAATCAACTAA TERM 1316 1379206 - 1379229 + r 93 -11 -4.47707 | opp_overlap 1379206, overlap 1379203 TGGTTAACGTTAAAA GGGCCTCATC CTGC GATGAAGCCC TTGTTTTTAATCAAC TERM 1317 1379229 - 1379206 - R 93 -13.2 -4.19238 | opp_overlap 1379206 1379203 TGGTTAACGTTAAAA GGGCCTCATC CTGC GATGAAGCCC TTGTTTTTAATCAAC Nham_1223 1381600 - 1379273 - | peptidoglycan binding domain-containing protein TERM 1318 1381058 - 1381082 + g 75 -12.1 -3.66018 | TGGAGGCGTAGCGGC GGGCGTGATCG TCG CGGTCGCGTCC TTCTTCGGCTCGTCC Nham_1224 1383398 - 1381920 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 1319 1382282 - 1382295 + g 79 -9.5 -4.11216 | CGCTCATGACGACCG CGCGG TACA CCGCG TTTTCGAGCTGGCGG TERM 1320 1383648 - 1383613 - g 72 -4.5 -4.56597 | GCCCGCCGTGAAAAA GGCTGCCGTCGCGAA ACCGGA TGCGGGACGTCTGCC GGAATGGAATCTCGC Nham_1225 1383530 - 1385410 + | peptidase M3B, oligoendopeptidase-related clade 3 TERM 1321 1385974 - 1385986 + F 71 -7.7 -4.07786 | overlap 1385969 1385967 CAGGCAATTGTCGGC TCGAG CCG CTCGA TTTGTACATTTTGTA Nham_1226 1386107 - 1386259 + | hypothetical protein TERM 1322 1386685 - 1386650 - g 83 -7.5 -4.56775 | overlap 1386653 1386655 AGGCGGCGCTAAAAA CGATAGCGGATGCCG GCGTGT CGGCATTCGCGATGG AACTGATGCCGCGCA Nham_1227 1386343 - 1387473 + | NAD(P)(+) transhydrogenase (AB-specific) Nham_1228 1387618 - 1387935 + | NAD(P) transhydrogenase subunit alpha part TERM 1323 1388114 - 1388060 - f 100 -21.9 -3.61219 | gap 2, opp_overlap 1388061 1388073, overlap 1388069 1388071 1388073 AGAAAACGCGTCAAA TCAAGATCATAGAGCCTCGCTTCTGAT TCA ATCAGAAGCGAGGCTCTA-G-TCATGA CCGTTTCGGATGACT TERM 1324 1388107 - 1388069 - f 100 -27.8 -2.83396 | opp_overlap 1388061 1388073, overlap 1388060 1388071 1388073 GTCAAATCAAGATCA TAGAGCCTCGCTTCTGAT TCA ATCAGAAGCGAGGCTCTA GTCATGACCGTTTCG TERM 1325 1388105 - 1388071 - f 100 -26 -2.95877 | opp_overlap 1388061 1388073, overlap 1388069 1388060 1388073 CAAATCAAGATCATA GAGCCTCGCTTCTGAT TCA ATCAGAAGCGAGGCTC TAGTCATGACCGTTT TERM 1326 1388073 - 1388103 + F 100 -22.8 -2.82635 | opp_overlap 1388073 1388071 1388069 1388060, overlap 1388061 AATCAAGATCATAGA GCCTCGCTTCTGAT TCA ATCAGAAGCGAGGC TCTAGTCATGACCGT TERM 1327 1388103 - 1388073 - f 100 -22.8 -3.02038 | opp_overlap 1388061 1388073, overlap 1388071 1388069 1388060 AATCAAGATCATAGA GCCTCGCTTCTGAT TCA ATCAGAAGCGAGGC TCTAGTCATGACCGT Nham_1229 1388178 - 1389578 + | NAD(P) transhydrogenase, beta subunit Nham_1230 1389609 - 1390082 + | hypothetical protein TERM 1328 1390113 - 1390132 + F 75 -4.2 -4.7373 | overlap 1390120 ATGAGCCGGCACCTT TCAATGCC GGTC GGCGTGGA TTTTTCGTGCGCTGG TERM 1329 1390120 - 1390150 + F 72 -6.1 -4.33653 | gap 1, overlap 1390113 GGCACCTTTCAATGC CGGTCGGCGTG-GA TTTT TCGTGCGCTGGCCG TTTGGTTTTTCGCTG Nham_1231 1390368 - 1390463 + | hypothetical protein Nham_1232 1390667 - 1391521 + | hypothetical protein TERM 1330 1391704 - 1391685 - T 100 -15 -4.8048 | opp_overlap 1391685 CGCCGATACGAAAAA CGCGAGCC CCGG GGCTCGCG TTTTTCGTATTCAAA TERM 1331 1391685 - 1391704 + T 100 -15 -4.87626 | opp_overlap 1391685 CGCCGATACGAAAAA CGCGAGCC CCGG GGCTCGCG TTTTTCGTATTCAAA rpsU 1392021 - 1391734 - | 30S ribosomal protein S21 TERM 1332 1391891 - 1391908 + g 76 -7.7 -4.30576 | TCGGCCTTTTCGCGA GCCTTCT TTTC AGAGGGC TTTTCGTAATGACCG TERM 1333 1392297 - 1392314 + G 73 -3.4 -4.69027 | gap 1, opp_overlap 1392295, overlap 1392297 1392298 TGTCAGGAAATACGC G-GCCGA ACTGA TCGGCAC TTTTTGGCTGACTTT TERM 1334 1392669 - 1392708 + G 71 -11.4 -3.51406 | opp_overlap 1392665, overlap 1392663 CGGTCACTACAGCCT CATGGTCGGCTTCATCAC CGAA GTGACGATGACGGCCATG TTCCTGTTTGTCATC Nham_1234 1392277 - 1392990 + | aquaporin Z Nham_1235 1394292 - 1393177 - | phosphoribosylaminoimidazole carboxylase ATPase subunit Nham_1236 1394774 - 1394289 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 1335 1394991 - 1394941 - g 77 -14 -3.27525 | overlap 1394936 1394937 GGCCGCGAAACGCAA GGCGAG-CCGCCGCAAGGCCGCAC CTGCC GCGCGG-CTGGCGGCGCTCTCACC CAAGCGCCAAACGGT TERM 1336 1395104 - 1395114 + G 72 -2.4 -4.77567 | GATCTTGAGGCCTTC GCGG AGA CCGA TTTTCTTCTGGGCGT Nham_1237 1394894 - 1395577 + | diguanylate cyclase Nham_1238 1395962 - 1395687 - | hypothetical protein Nham_1239 1396147 - 1396332 + | hypothetical protein Nham_1240 1397531 - 1396428 - | FAD dependent oxidoreductase TERM 1337 1397062 - 1397032 - G 95 -10.5 -4.56775 | gap 2, overlap 1397018 1397037 AGCGGCGTGTAAAAA GCGAACGCCGCAGCG TCT CGCT-CGGCG-TCAC CGCGCAATGCCAGCA TERM 1338 1397058 - 1397037 - G 74 -12.3 -3.45031 | gap 1, overlap 1397018 1397032 CGTGTAAAAAGCGAA CGCCGCAGCG TCT CGCT-CGGCG TCACCGCGCAATGCC Nham_1241 1397792 - 1400488 + | diguanylate cyclase/phosphodiesterase TERM 1339 1400682 - 1400707 + F 76 -12.6 -3.02166 | opp_overlap 1400681 1400680, overlap 1400680 GCCGCATCCAAAACT CCGCCGGCAA CGTGTA TTGCCGGTGG TCGTTTGATTCCGCC TERM 1340 1401391 - 1401351 - f 71 -12.5 -2.52623 | opp_overlap 1401350 1401349, overlap 1401348 1401355 GCTGCGCGACAATAC TCAAGCCGAACTGATGCGG CTG CAGCGCCAGCTCGGCATGA CCTTCATCATCGTCA TERM 1341 1401387 - 1401355 - f 75 -11.9 -3.21726 | opp_overlap 1401350 1401349, overlap 1401351 1401348 CGCGACAATACTCAA GCCGAACTGATGCGG CTG CAGCGCCAGCTCGGC ATGACCTTCATCATC Nham_1243 1401933 - 1402847 + | binding-protein-dependent transport systems inner membrane component Nham_1244 1402847 - 1403665 + | binding-protein-dependent transport systems inner membrane component Nham_1245 1405634 - 1403703 - | AsmA TERM 1342 1404454 - 1404502 + g 70 -7.4 -4.07568 | gap 2, overlap 1404452 TAGATTTGCGCCTCG CCGATGCTGAGCGCCAGCGTTCCG TTG CGGAG-GTTGGCGCCGAGTG-CGG TTTTGCCGAGCCGGG TERM 1343 1406197 - 1406212 + G 75 -11.8 -3.61398 | CATCCGCGCTGGCGG CGCCGG CATT CCGGCG TTCTTCACCAAGACC Nham_1246 1405862 - 1406569 + | 3-oxoacid CoA-transferase, subunit A TERM 1344 1406705 - 1406688 - g 71 -12.7 -3.07344 | GGACCCGCGAACAGA TGGCGGC GCGT GCCGCCA AGGAGCTGCGCGACG Nham_1247 1406666 - 1407316 + | 3-oxoacid CoA-transferase, subunit B Nham_1248 1408053 - 1407457 - | hypothetical protein Nham_1249 1411220 - 1408125 - | PAS/PAC sensor signal transduction histidine kinase TERM 1345 1408278 - 1408320 + g 77 -14.2 -2.89447 | gap 2, overlap 1408277 TTCTGATGCCTGATC GCTCGGCGCCGGCGTGCGGA ACGGC TCCGT-CGCCGCCGCC-AGC TCGTTCTCGTTGAGG TERM 1346 1408713 - 1408733 + g 73 -3.2 -4.75372 | opp_overlap 1408711 GTATTCGACGTAACG TTCGTTGC CGAGC GCGCCGAA TTTTTCGTCCGTCAT Nham_1250 1411501 - 1411884 + | phasin 2 Nham_1251 1412141 - 1412554 + | phasin 2 TERM 1347 1412578 - 1412612 + F 100 -16.6 -3.70863 | gap 1, opp_overlap 1412564 1412585, overlap 1412585 ACCGTTCGCGATCCG CGACAAA-CCCGGGC GGGTCG GCCCGGGTTTTGTCG TTTCAGTGCTGTCTC TERM 1348 1412604 - 1412585 - f 83 -12.1 -3.86897 | opp_overlap 1412578 1412585 GCGATCCGCGACAAA CCCGGGC GGGTCG GCCCGGG TTTTGTCGTTTCAGT TERM 1349 1412585 - 1412604 + F 100 -12.1 -4.62168 | opp_overlap 1412585, overlap 1412578 GCGATCCGCGACAAA CCCGGGC GGGTCG GCCCGGG TTTTGTCGTTTCAGT TERM 1350 1412974 - 1412993 + F 71 -7.8 -4.08706 | opp_overlap 1412967 1412968, overlap 1412967 1412974 1412970 1412970 AGTAAAATCGGCAAG CCGGACCG TTGC CGGTTTGG TTTGTCTAATCCCAC Nham_1252 1413232 - 1413450 + | hypothetical protein TERM 1351 1415064 - 1415054 - g 71 -4.6 -4.44277 | GATGAAAACGGAAAA CCGC TCG ACGG TGCAAACAAGTACAT Nham_1253 1413980 - 1415410 + | hypothetical protein TERM 1352 1416105 - 1416133 + F 71 -10.9 -3.20078 | overlap 1416092 1416103 1416118 1416121 CTCGTAGACGTGCCA CAGGCCGTCGCGT TTG ACGCGCTCGCCTG TCTTGATCTGACGTG Nham_1254 1416191 - 1416460 + | hypothetical protein Nham_1255 1417574 - 1416504 - | polysaccharide deacetylase Nham_1256 1418609 - 1417833 - | hypothetical protein Nham_1257 1419239 - 1418862 - | hypothetical protein Nham_1258 1419736 - 1420461 + | Crp/FNR family transcriptional regulator TERM 1353 1420695 - 1420670 - f 100 -18.3 -4.89063 | GCAGCCAAAAAGAAA GGCCCGACGCC GTGA AGCGTCGGGCC GAGTCAGAGGAGGAA TERM 1354 1420729 - 1420711 - f 75 -12.4 -3.25223 | GAGTCAGAGGAGGAA CGGACCCA CGG CGGGTCCG GATGTCGCCGGAGTC TERM 1355 1421340 - 1421369 + G 71 -4.9 -4.43879 | overlap 1421329 CGATCGGTGCTGGGA TCGCCGTCACCGT TATC GCTTTGATGGCGA TTTTCCTTACCTGAT Nham_1259 1421231 - 1421383 + | hypothetical protein TERM 1356 1421424 - 1421453 + T 100 -22.3 -5.36441 | CGTTTGCACTACTCA GCCCGTCTCTGAG GTAC CTCAGAGACGGGC TTTTTTCTGTCGGGA TERM 1357 1421562 - 1421529 - T 100 -18.9 -3.02144 | opp_overlap 1421547 1421550, overlap 1421531 1421550 GTATTGTCGCGAACA TAGCGGCGCGGCGCT AATC AACGCCGCGCGGCTA ACTGCTAGGCGTCGT TERM 1358 1421560 - 1421531 - T 89 -17.1 -3.06815 | opp_overlap 1421547 1421550, overlap 1421529 1421550 ATTGTCGCGAACATA GCGGCGCGGCGCT AATC AACGCCGCGCGGC TAACTGCTAGGCGTC Nham_1260 1421802 - 1421560 - | hypothetical protein TERM 1359 1421909 - 1421899 - g 73 -6.8 -4.36903 | overlap 1421900 CCGATGAAACAGAAA TCCG GGC CGGA CAAAGCGCCGGCAGA Nham_1261 1421887 - 1422048 + | transposase IS3/IS911 TERM 1360 1422063 - 1422034 - T 88 -17.1 -2.88427 | opp_overlap 1422050 1422053, overlap 1422021 1422053 AACATCTCCGACATA GCGGCGCGGCGCT AATC AACGCCGCGCGGC TAACTGCTAGGCGTC Nham_1262 1422305 - 1422063 - | hypothetical protein TERM 1361 1422412 - 1422402 - g 73 -6.8 -4.36903 | overlap 1422403 CCGATGAAACAGAAA TCCG GGC CGGA CAAAGCGCCGGCAGA Nham_1263 1422390 - 1422755 + | transposase IS3/IS911 Nham_1264 1422756 - 1423172 + | putative transposase Nham_1266 1424834 - 1423812 - | transposase, IS4 TERM 1362 1424323 - 1424354 + g 70 -10 -3.61328 | overlap 1424331 TTGCGCCCGGCGCCG CCGGCCGGCGGCTC GCCA GAGCCGTCCTTCGG TTTGACGCTCTTCAT TERM 1363 1424884 - 1424895 + r 75 -5.8 -4.57073 | overlap 1424877 CATGCTTACAGCTCG GCCA CGAC TGGC TTTTTCAACAGCCTG TERM 1364 1425191 - 1425177 - R 75 -10 -3.72576 | CGCTGCCGGACCAAA GCGTGA TCT TCACGC GTGTGCCATCAGAAC Nham_1268 1425826 - 1425581 - | CsbD-like TERM 1365 1425870 - 1425884 + H 72 -5.6 -4.4522 | opp_overlap 1425870, overlap 1425867 1425872 GACGGAGACTAACAA GGCCGA TGA TCGGGC TTTGTTCTGGTTTTG Nham_1269 1426288 - 1426989 + | hypothetical protein TERM 1366 1427167 - 1427206 + T 78 -11.4 -3.79021 | opp_overlap 1427187 GCGGCCGGTTGTCAC CCAGCGTGTGCCACCG ACAACGCA CGGGAGCATACGCTGG TTTCATGAGCTTTTC Nham_1270 1428236 - 1427367 - | negative regulator of AmpC, AmpD TERM 1367 1429106 - 1429130 + G 71 -8.6 -3.84825 | gap 1, overlap 1429110 GTCCTCGATGCAGCT CGACGAGGCCG ATCG CGGCTTC-TCG TTTCGTCTCGATGGG TERM 1368 1429577 - 1429552 - g 75 -13.9 -3.01712 | CCCTGCGCGGCAAGA CGGGCGGCGGC TCGC GCCACCGGCCG GAAATCGAACGGGCC Nham_1271 1428576 - 1429775 + | methyltransferase Nham_1272 1429779 - 1430159 + | hypothetical protein Nham_1273 1430156 - 1431913 + | peptidoglycan glycosyltransferase TERM 1369 1432962 - 1432985 + G 88 -7.3 -4.91712 | overlap 1432963 GACGGCTTGAGCTGG TCGGCGAGC GCAACG GCGCGCCGG TTTTTGTCGATTACG murE 1431950 - 1433407 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 1370 1434633 - 1434652 + G 71 -9.2 -3.72576 | CTGCGGCCCGCTGAT GCGCAACC TGTG GGATGCGC TTTCCTCCGGCAAGC Nham_1275 1433404 - 1434840 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase mraY 1434852 - 1435958 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 1371 1437193 - 1437176 - g 79 -9.1 -4.19238 | gap 1 GCGGCAAGCCGAAAA GCGGCGGC ATC GCC-CCGC TCGCCGAGTTATTCC murD 1436077 - 1437477 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 1372 1437938 - 1437967 + G 70 -12.1 -3.17051 | overlap 1437936 GCCAGATCCGCCGTT CGGCGCTGATCGT ATTT GCGCTCAGCGTCG TATTGATCGTGGCCA Nham_1278 1437691 - 1438839 + | cell cycle protein TERM 1373 1439598 - 1439619 + G 73 -8.7 -4.07568 | gap 1, overlap 1439600 ATCGAAAAGCTTGGA TC-GCCGCTG TGG CAGCGGCTGG TTTTGACCCAACAGG TERM 1374 1439600 - 1439616 + G 75 -13.7 -3.08032 | overlap 1439598 CGAAAAGCTTGGATC GCCGCTG TGG CAGCGGC TGGTTTTGACCCAAC murG 1438956 - 1440068 + | N-acetylglucosaminyl transferase TERM 1375 1441106 - 1441132 + G 74 -12.2 -3.53012 | ATCCGCAAGGCGATC GCGGCGTTCGGC GGC GTCAAGCGCCGC TTTACCAAGACCGGC murC 1440170 - 1441573 + | UDP-N-acetylmuramate--L-alanine ligase Nham_1281 1441600 - 1442085 + | hypothetical protein murB 1442085 - 1443002 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1376 1443105 - 1443053 - f 70 -2.7 -4.86621 | overlap 1443055 1443059 1443060 ATGCTCAATCAAAAA GATTAAGGCTAGAGTCTGATTCAAC GTA GTCGAATCAGACTCCAAGAGTAGGC CGATGCGCATCACCA TERM 1377 1443098 - 1443060 - f 73 -12.6 -2.76434 | overlap 1443059 1443055 1443053 ATCAAAAAGATTAAG GCTAGAGTCTGATTCAAC GTA GTCGAATCAGACTCCAAG AGTAGGCCGATGCGC Nham_1283 1443108 - 1444130 + | D-alanine--D-alanine ligase TERM 1378 1444214 - 1444180 - f 75 -5.7 -4.67038 | overlap 1444182 1444183 GCGTCAAAATTAAAA CAGCCTCGCTTCTGA TTCCG TCAGAAGCGAAAAGG CTCTGGGCTGGCCGC TERM 1379 1444282 - 1444299 + F 72 -5.5 -4.50976 | overlap 1444272 GATCGGCCGCGGCCG GAAAGCC GCAA GGCATTC TTTTATCGTATCAAA Nham_1284 1444583 - 1445623 + | cell division protein FtsQ TERM 1380 1445629 - 1445608 - f 87 -8 -4.74801 | gap 1 GAAGTCCAGCAAAAA GGCCGG-CA GCGCA TGACCGGCC TCGACCGCAACCAGA Nham_1285 1445620 - 1446942 + | cell division protein FtsA Nham_1286 1447034 - 1448857 + | cell division protein FtsZ TERM 1381 1448883 - 1448908 + F 78 -8.2 -4.55625 | opp_overlap 1448877 AATTGGAAATCGGAG GGGCTTCGAC GATCAA GCCGGAGCCC TTTTCTGCTCTTGAT TERM 1382 1449289 - 1449308 + G 91 -5.6 -5.35224 | AGTCTGACCCTTGGG CCTGCCTC GATC GATGCGGG TTTTATTTTTATCCG lpxC 1449196 - 1450152 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 1383 1450383 - 1450338 - f 72 -6.1 -4.32402 | opp_overlap 1450341 1450342 1450377, overlap 1450335 1450341 1450342 1450373 GCTCAATCAAAAGAA TAAGGCTAGAGGCTGGTCCAA TGCG TTGGATCAGACTCTGGCGTTT CGCCTTAATCCCGGC TERM 1384 1450380 - 1450341 - f 77 -7.8 -4.26559 | opp_overlap 1450341 1450342 1450377, overlap 1450338 1450335 1450342 1450373 CAATCAAAAGAATAA GGCTAGAGGCTGGTCCAA TGCG TTGGATCAGACTCTGGCG TTTCGCCTTAATCCC TERM 1385 1450341 - 1450380 + F 81 -12.2 -3.67976 | opp_overlap 1450338 1450335 1450341 1450342 1450373, overlap 1450342 1450377 CAATCAAAAGAATAA GGCTAGAGGCTGGTCCAA TGCG TTGGATCAGACTCTGGCG TTTCGCCTTAATCCC TERM 1386 1450342 - 1450379 + F 86 -15.7 -2.80464 | opp_overlap 1450341 1450338 1450335 1450342 1450373, overlap 1450341 1450377 AATCAAAAGAATAAG GCTAGAGGCTGGTCCAA TGCG TTGGATCAGACTCTGGC GTTTCGCCTTAATCC Nham_1288 1450594 - 1451571 + | putative lipoprotein Nham_1289 1451653 - 1453338 + | DNA repair protein RecN TERM 1387 1453401 - 1453364 - g 81 -10.6 -4.24002 | gap 1 CGGCAAAGCCCAAAA CGCCTCCGCCCGTCG ATTCCCTCA CGA-GGGCGCAGGCG AAGATCGAGCACAAG TERM 1388 1453430 - 1453406 - g 71 -12.9 -3.05844 | GGGCGCAGGCGAAGA TCGAGCACAAG CGG CTCGCGCTCGA GATCGAAACGCATAA TERM 1389 1453662 - 1453688 + G 71 -9.4 -3.74747 | opp_overlap 1453661 1453660, overlap 1453645 CAGCGACGAGGAAGT CGCTGAATTCGT CGA ACGCATCCAGCG TTTCCTGAAACTTGG Nham_1290 1453345 - 1455489 + | DNA ligase, NAD-dependent Nham_1291 1456237 - 1455533 - | fumarylacetoacetate (FAA) hydrolase Nham_1292 1458105 - 1456300 - | ABC transporter related TERM 1390 1456377 - 1456363 - G 87 -5.6 -5.15969 | overlap 1456364 CTGTAATCGAAAAAA CGACGC ATA GCGTCC ACCGCGCCGTAGCAG TERM 1391 1456376 - 1456364 - G 71 -9.1 -3.68859 | overlap 1456363 TGTAATCGAAAAAAC GACGC ATA GCGTC CACCGCGCCGTAGCA TERM 1392 1457328 - 1457356 + g 76 -9.6 -4.0156 | gap 1, overlap 1457331 GCGTTTCCATCAGCG GACTGGCGCGGTT CGAG ACCCGCGCCA-TC TTGTTGTTGGTCTGC TERM 1393 1457331 - 1457354 + g 75 -12.4 -3.59107 | overlap 1457328 TTTCCATCAGCGGAC TGGCGCGGTT CGAG ACCCGCGCCA TCTTGTTGTTGGTCT TERM 1394 1458179 - 1458190 + r 95 -7.2 -5.40072 | CGACCGACTCAATGC CCGC AATG GCGG TTTTTTTCAAGCCGA Nham_1293 1459238 - 1458228 - | UDP-glucose 4-epimerase TERM 1395 1459143 - 1459132 - G 73 -3.6 -4.7254 | opp_overlap 1459142, overlap 1459133 1459134 AGCGCGGACGAAAAA CCCG TGGA CAGG TTGTCGACGACGACG Nham_1294 1459428 - 1460372 + | lipopolysaccharide heptosyltransferase I Nham_1295 1460924 - 1460373 - | HAD family hydrolase Nham_1296 1461514 - 1460921 - | phosphoheptose isomerase TERM 1396 1461527 - 1461549 + r 71 -7 -4.1899 | opp_overlap 1461541 1461544, overlap 1461536 CAAGACGCACCTTTG TCGCCGTGAT CAG ATCACGATGA TTTTGGATCGAATCG Nham_1297 1462774 - 1461701 - | lipopolysaccharide heptosyltransferase II TERM 1397 1461793 - 1461840 + g 78 -6.3 -4.67353 | gap 2, overlap 1461791 TCATGCAGCGATGGT CGTTCAT--GGTGCAGACCGGGC GGTG GCACGGTCGGCACGGGATGGACG TTTTTGCCTGAATCG TERM 1398 1462065 - 1462075 + g 80 -4.6 -4.8622 | overlap 1462048 GTTGCCACGATTTCG GCGG CGA TCGC TTTTTCGTTGGGGCC TERM 1399 1462969 - 1462981 + G 74 -6.2 -4.4009 | overlap 1462964 TCATGCTGCTGGTGA CCGG GGGCG CCGG TTTTATCGGATCGAA TERM 1400 1463283 - 1463321 + G 70 -10.3 -3.53811 | ACGCCTTTCATCTAT GCCTCGTCGG-CATCGACC TAC GG-CGATGGCCGGCAGGGC TTTCGCGACGATCAA Nham_1298 1462956 - 1463936 + | ADP-L-glycero-D-manno-heptose-6-epimerase Nham_1299 1464059 - 1465528 + | bifunctional ADP-heptose synthase Nham_1300 1465593 - 1467521 + | polysaccharide biosynthesis protein CapD Nham_1301 1468617 - 1467565 - | hypothetical protein TERM 1401 1467682 - 1467658 - G 100 -8.5 -5.31275 | opp_overlap 1467659, overlap 1467660 1467661 1467673 GCCGACGACAAAAAA CACCGCGCCGT ACA ACAGCGCGACA TTGATGCCTTCGCTG TERM 1402 1467680 - 1467660 - G 89 -11.1 -4.29153 | opp_overlap 1467659, overlap 1467658 1467661 1467673 CGACGACAAAAAACA CCGCGCCGT ACA ACAGCGCGA CATTGATGCCTTCGC TERM 1403 1467679 - 1467661 - G 70 -12.4 -3.16407 | opp_overlap 1467659, overlap 1467660 1467658 1467673 GACGACAAAAAACAC CGCGCCGT ACA ACAGCGCG ACATTGATGCCTTCG TERM 1404 1468212 - 1468180 - G 76 -14 -3.16217 | overlap 1468178 GACGAAGATCGAATA GGCCGCTGCCCGCC AACCG GACGGGCCGCGTCC GACCAGCCAGAGCCG TERM 1405 1468472 - 1468448 - G 70 -12.9 -2.8805 | overlap 1468437 ACGAGGTCGGAGACA TCGACCTTGCG GAG CGCAAGGTAGA GCAGCGCAGCCGAGA Nham_1302 1468712 - 1469731 + | NAD-dependent epimerase/dehydratase TERM 1406 1470488 - 1470465 - g 73 -11 -3.57263 | opp_overlap 1470463 1470476, overlap 1470451 AGCCCGATTCGCAAA CCGCCTCG GGCTACGT CGAGGCGG GGTATCTCTGGAACA Nham_1303 1469921 - 1471333 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Nham_1304 1471667 - 1472707 + | oxidoreductase-like TERM 1407 1473749 - 1473719 - g 73 -13.3 -3.13403 | gap 1, overlap 1473717 GTCGCTGCACCAACA GACCGCGTACCGGA ATTT CCCGGT-CGCGGCC GCCGGCCTGCCGGTC Nham_1305 1472724 - 1473872 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 1408 1475082 - 1475040 - g 88 -14.8 -3.68569 | overlap 1475042 TTACGCACGCAAGAA CACCGCGACGCCGGTGAAGG CCG CGTTGACCGGGGTCGCGGTC AACGTCGCGCTGAAA TERM 1409 1475080 - 1475042 - g 93 -17.4 -3.42256 | overlap 1475040 ACGCACGCAAGAACA CCGCGACGCCGGTGAAGG CCG CGTTGACCGGGGTCGCGG TCAACGTCGCGCTGA Nham_1306 1473916 - 1475442 + | integral membrane protein MviN TERM 1410 1475777 - 1475833 + G 89 -10.8 -4.27443 | gap 2, overlap 1475823 CCGACCAGCCCTTCA CCGCGCCGCCG-TAT-CCGATCCTCGTC CGC GACGAGGTGCGGCATGTCGGCGATGCCG TTGTTTTCGTGGTCG TERM 1411 1476147 - 1476126 - g 72 -13.7 -2.73875 | overlap 1476123 CGTCTGCGAATATGA CGCCAGGCG CGAT CGCCTGACG CTGACGGTCGGCAGT TERM 1412 1476610 - 1476627 + G 74 -14.1 -2.94218 | opp_overlap 1476581 1476579, overlap 1476594 GCCTATCGCGGCGCG GGCCGCC CGGA GGCGGCC TATGTGGTGGAGCGT Nham_1307 1475506 - 1477809 + | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding TERM 1413 1477857 - 1477825 - T 90 -15.8 -3.61398 | opp_overlap 1477830, overlap 1477830 CTGTCCGGCGAACAA CAAAAGGGGCGAAT AACGG ATTCGCCCCTTTTA CCGAACGTCTTGTGC TERM 1414 1477852 - 1477830 - T 100 -13.5 -4.89477 | opp_overlap 1477830, overlap 1477825 CGGCGAACAACAAAA GGGGCGAAT AACGG ATTCGCCCC TTTTACCGAACGTCT TERM 1415 1477830 - 1477852 + T 95 -13.5 -4.08394 | opp_overlap 1477830 1477825 CGGCGAACAACAAAA GGGGCGAAT AACGG ATTCGCCCC TTTTACCGAACGTCT Nham_1308 1478314 - 1477892 - | CHRD Nham_1309 1478906 - 1478661 - | AsnC family transcriptional regulator TERM 1416 1479728 - 1479718 - g 73 -3.2 -4.72272 | opp_overlap 1479724, overlap 1479720 CCTCGCCACGAAAAA TACC CAC GGCA CCGGCTGTTCGCTGT TERM 1417 1479836 - 1479819 - g 71 -14.1 -2.63631 | CGAAGGCTTACATCA CCGCGGC GATC GCCGCGG CGGACCGGCTGGGCG Nham_1310 1479098 - 1479904 + | phosphomethylpyrimidine kinase Nham_1311 1479984 - 1480781 + | metallophosphoesterase TERM 1418 1481602 - 1481641 + G 77 -12.7 -3.5394 | CGGCCTTTCCGGTGA GCGGCCCCCGCGACGTC ATCGGA GACGCTGCGGTCGCCGC TTTGGACGACGATTT Nham_1312 1480782 - 1481831 + | glycosyl transferase, group 1 Nham_1313 1483001 - 1481862 - | hypothetical protein TERM 1419 1482293 - 1482328 + g 71 -9.6 -3.72576 | opp_overlap 1482291 1482293 TTTCTGATTCAAAGA CCGCAGCGTCGACG ACTGCCTG CTTCGGCGCCGCGG TTTCCTCAGGCGAGG Nham_1314 1484069 - 1483059 - | mandelate racemase/muconate lactonizing enzyme TERM 1420 1483554 - 1483592 + g 91 -15.3 -3.92324 | gap 1 TCGAGCCTGTTTGCG CACGGCGGCGAT-GCGTT CGGG ATCGCCATCGCCGCCGAG TTTGATCTTGAGGAG Nham_1315 1484174 - 1485307 + | hypothetical protein Nham_1316 1485310 - 1486080 + | ABC transporter related Nham_1317 1486101 - 1486982 + | hypothetical protein TERM 1421 1487179 - 1487136 - T 71 -7.7 -4.0825 | gap 1, opp_overlap 1487136 1487136, overlap 1487137 TGCTCAATCAAATAA GGCT-TAGAGTTTGATTCAA AGCAG TTGAATCAAACTCGAGAGCG CTTTCCGTTCTGATG TERM 1422 1487203 - 1487215 + T 90 -4.7 -5.45802 | opp_overlap 1487203 TCTGATGGAATCAAA GCCGG GCT CCAGC TTTTTGTTTTGACGC TERM 1423 1487331 - 1487314 - T 100 -12.7 -5.10461 | opp_overlap 1487314 TCTAGCCAACAAAAA CGGAGGC TTGC GCCTCCG TTCTTCGTAGCCGAA TERM 1424 1487314 - 1487331 + T 84 -12.7 -3.71848 | opp_overlap 1487314 TCTAGCCAACAAAAA CGGAGGC TTGC GCCTCCG TTCTTCGTAGCCGAA Nham_1318 1492911 - 1487359 - | hypothetical protein Nham_1319 1493321 - 1493668 + | Hpt domain-containing protein Nham_1320 1493798 - 1494118 + | ferredoxin Nham_1321 1494396 - 1495424 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1425 1496144 - 1496129 - T 70 -11.8 -2.83273 | overlap 1496122 1496119 1496126 TGAAACGACCAAGCA CGCCGC GCTG GCGGCG GCAAGCGGCCCACTC Nham_1323 1498476 - 1496371 - | hypothetical protein TERM 1426 1497550 - 1497523 - G 81 -15.6 -3.03124 | opp_overlap 1497522 GGCGATGTGCGAATA CCGCACCGCG AGCGCGAG CGCGGTGCGG GTCTGGTAGCTGTAG Nham_1324 1499783 - 1498677 - | hypothetical protein TERM 1427 1499052 - 1499022 - G 71 -6 -4.30719 | overlap 1499043 GGTGGCCAGAATAAA GACCACCGACACCG AGA CGAAGTCGATCGCC GGCGTCGCGGGCATC TERM 1428 1499898 - 1499885 - R 75 -5.2 -4.62168 | opp_overlap 1499885 ATCCAAAGGACAAAA CGGC GTGCAG GCCG GATTTTTGACAAGGG Nham_1325 1500682 - 1500248 - | hypothetical protein TERM 1429 1501091 - 1501127 + G 74 -5 -4.64861 | gap 1 CTCGCTGAGCATGGC GCGCGCGCTTC-GCTCG TTGG CGGCCTGAACCCCGCGC TTTATTTTGCCGGCG Nham_1326 1500740 - 1501336 + | hypothetical protein Nham_1327 1501783 - 1501358 - | hypothetical protein Nham_1328 1502462 - 1501923 - | putative phosphohistidine phosphatase, SixA TERM 1430 1503305 - 1503283 - g 78 -14.8 -3.01712 | opp_overlap 1503272 1503270 GTCGCTGTCGCAACA GGGCGCGGAC TAT GTTCGCGCCC ATGCGGCCGAAAATG Nham_1329 1502963 - 1504336 + | FAD dependent oxidoreductase Nham_1330 1504461 - 1504976 + | methionine sulfoxide reductase B TERM 1431 1504980 - 1504994 + F 71 -10 -3.59087 | TCGGCGACGTAGGGA CTTCGC TGC GCGAAG TTTCCAGATCGTCTT Nham_1331 1505430 - 1507277 + | flagellar basal body FlaE TERM 1432 1507358 - 1507322 - f 79 -7.3 -4.57581 | opp_overlap 1507327, overlap 1507302 1507323 ATTCGAAAGAATAAA GCAGAGTTTGATTCAAC GCG GTTGAACCGGACTCTGG TCGCGGCGCGGATCG TERM 1433 1507636 - 1507626 - g 76 -8.2 -4.18018 | opp_overlap 1507625 1507626 GTTGCGGACCGAAAA CGCC GGC GGCG CTTATGCCGATCAGA TERM 1434 1508539 - 1508570 + G 78 -6.6 -4.56597 | gap 1, opp_overlap 1508534 ATTCCGAACACGGCG TCGAACCCGAATGAC AAG GTCAT-CGGCGTCGA TTTTTCCGGCGACGC Nham_1332 1507399 - 1509258 + | flagellar hook-associated protein Nham_1333 1509304 - 1511067 + | hypothetical protein Nham_1334 1511429 - 1512922 + | pyridoxal-dependent decarboxylase flbT 1513383 - 1512952 - | flagellar biosynthesis repressor FlbT Nham_1336 1513747 - 1515333 + | hypothetical protein TERM 1435 1515355 - 1515388 + F 89 -17.5 -2.71712 | opp_overlap 1515356 1515362, overlap 1515362 1515386 ACGACTTATCAGACA ACGAAAACGGCGGGG GAAA CCCCGCCGTTTTTGC GTTTGCCGGCCCCGC TERM 1436 1515387 - 1515356 - f 100 -18.8 -3.55447 | opp_overlap 1515355 1515362 1515386, overlap 1515362 CGACTTATCAGACAA CGAAAACGGCGGGG GAAA CCCCGCCGTTTTTG CGTTTGCCGGCCCCG TERM 1437 1515381 - 1515362 - f 100 -16.4 -4.53636 | opp_overlap 1515362 1515355, overlap 1515356 ATCAGACAACGAAAA CGGCGGGG GAAA CCCCGCCG TTTTTGCGTTTGCCG TERM 1438 1515362 - 1515381 + F 100 -16.4 -4.81249 | opp_overlap 1515356 1515362, overlap 1515355 ATCAGACAACGAAAA CGGCGGGG GAAA CCCCGCCG TTTTTGCGTTTGCCG TERM 1439 1516768 - 1516726 - g 78 -15.4 -2.72344 | CTCGACCTCCAACGA GGCCGCCGCCGCGACCATCG GCA CGATCGGCGGGACCGCGGCC GGCGCTGGCTATGCG Nham_1337 1515725 - 1517338 + | hypothetical protein TERM 1440 1517359 - 1517385 + F 76 -2.8 -5.0133 | overlap 1517321 1517360 CAAGGCGCGACGCCG CGGCGGTCGCAA GTG TTCCGCCTGCCA TTTTTTAGGCGCATG flaF 1517493 - 1517858 + | flagellar biosynthesis regulatory protein FlaF TERM 1441 1518139 - 1518123 - g 74 -10.1 -3.71848 | overlap 1518120 1518126 CGTCCTGATCAAGAA CAACGCG TTC CGCGTCG GCGATTCAAAATTCG TERM 1442 1518136 - 1518126 - g 73 -8.2 -3.99374 | overlap 1518120 1518123 CCTGATCAAGAACAA CGCG TTC CGCG TCGGCGATTCAAAAT Nham_1339 1517887 - 1518252 + | hypothetical protein Nham_1340 1518665 - 1518300 - | hypothetical protein TERM 1443 1518810 - 1518847 + r 71 -8.3 -4.07568 | gap 1, opp_overlap 1518810, overlap 1518810 1518811 1518822 GAATTGGATTCGAAA GCGCGCGGGC-AGGGCGC AGC GCGCCTTCGTTCGCGAGG TTTTGAACGCGGAAG TERM 1444 1518833 - 1518810 - R 71 -10.2 -3.61103 | gap 1, opp_overlap 1518810 1518810 1518811 1518822 GAATTGGATTCGAAA GCGCGC-GGGC AGG GCGCAGCGCGC CTTCGTTCGCGAGGT TERM 1445 1518811 - 1518846 + r 73 -11.8 -3.04398 | gap 1, opp_overlap 1518810, overlap 1518810 1518810 1518822 AATTGGATTCGAAAG CGCGCGGGC-AGGGCGC AGC GCGCCTTCGTTCGCGAG GTTTTGAACGCGGAA Nham_1341 1521991 - 1518869 - | Outer membrane autotransporter barrel Nham_1342 1522671 - 1522180 - | hypothetical protein TERM 1446 1522212 - 1522243 + g 79 -10.8 -3.89212 | gap 1, overlap 1522214 1522215 CCGCGATCGGGATCG TGTGCTGGCGCGGCG GCG CGCTGCGCTGGC-CG TTTGCTGTGTAGGTC Nham_1343 1523063 - 1522668 - | chemotactic signal-response protein CheL flgI 1524187 - 1523063 - | flagellar basal body P-ring protein TERM 1447 1524357 - 1524372 + H 79 -6.8 -4.57341 | overlap 1524338 1524358 GAGGCGGCGGCGAAG TTGCCG TCAT CGGCAG TTTTTGCCGGGCGTT fliX 1524525 - 1524938 + | flagellar assembly regulator FliX Nham_1346 1525147 - 1525563 + | TraR/DksA family transcriptional regulator Nham_1347 1526133 - 1525852 - | hypothetical protein Nham_1348 1526348 - 1527088 + | hypothetical protein Nham_1349 1527088 - 1527813 + | hypothetical protein Nham_1350 1528918 - 1527830 - | hypothetical protein TERM 1448 1528076 - 1528109 + g 71 -10.9 -3.53012 | gap 1, overlap 1528077 CTGTTTCCAGATGTA CTGCGCCTG-GCCCTC GTT GAGGGCGCCGGCGCGC TTTGCGGCGAACACC TERM 1449 1528077 - 1528108 + g 75 -14.4 -2.71712 | gap 1, overlap 1528076 TGTTTCCAGATGTAC TGCGCCTG-GCCCTC GTT GAGGGCGCCGGCGCG CTTTGCGGCGAACAC Nham_1351 1529574 - 1528984 - | hypothetical protein TERM 1450 1529052 - 1529067 + g 74 -10.4 -3.72576 | overlap 1529031 GCCGCCGGCCGGTGG CCGGCA TGGG TGCCGG TTTGCTCGGGAAGCG Nham_1352 1532682 - 1529896 - | helicase-like Nham_1353 1535676 - 1532689 - | putative DNA methylase containing a Zn-ribbon TERM 1451 1535249 - 1535277 + g 95 -11 -4.62471 | gap 1 GTCATCAGAGCTAGG CGG-TCGCCCCGA GGCA TCGGTGCGAGCCG TTTTTCCGACTTCCC TERM 1452 1535524 - 1535556 + g 70 -10.5 -3.66424 | opp_overlap 1535524 1535529, overlap 1535529 1535530 TCCCTTCCAATAGGA GCCAAGCCCGGTCAG AGT CTGACCGAGATTTGC TTTGCGCTCCTTTTG TERM 1453 1535529 - 1535551 + g 70 -7.6 -4.07246 | opp_overlap 1535529 1535524, overlap 1535524 1535530 TCCAATAGGAGCCAA GCCCGGTCAG AGT CTGACCGAGA TTTGCTTTGCGCTCC Nham_1354 1536269 - 1535688 - | hypothetical protein Nham_1355 1539454 - 1536266 - | hypothetical protein TERM 1454 1538334 - 1538323 - GR 71 -5.8 -4.30844 | overlap 1538324 AGCCGACCAGGAAAA CGTC GTTA GACG GCCGGTCGAGGGCGG TERM 1455 1538696 - 1538723 + gr 71 -5.5 -4.34402 | CCGGGTGGCCTTTGC CACCATCGCGG TGATTT CCTTGGTGGTG TTTTCGTATGCGCCG Nham_1356 1539618 - 1539421 - | hypothetical protein TERM 1456 1539563 - 1539603 + gH 78 -8.9 -4.18197 | overlap 1539564 GTCAGGAATTGTCTT TTGTCGCCCTGAGGGGGTT TTC GACCCCTTCGAGGAGACGG TTTTGCGTCCGCCAT TERM 1457 1539767 - 1539751 - H 88 -15.1 -3.57462 | opp_overlap 1539746 CATCCCATTGCCAAA GCGGCGG AAT CCGCCGC AGTCGGTCTGGTACC Nham_1357 1539878 - 1540408 + | hypothetical protein Nham_1358 1540415 - 1540960 + | hypothetical protein Nham_1359 1541165 - 1541944 + | metallophosphoesterase Nham_1360 1542040 - 1542627 + | hypothetical protein TERM 1458 1543698 - 1543728 + G 100 -9.7 -4.87665 | gap 1, opp_overlap 1543683 TCGCGAGCGATGTTC GAACGCGCGGCAGC CGTC GC-GCCGTGCATTC TTTTTCTCGATGAGA Nham_1361 1542624 - 1544738 + | AAA ATPase, central region Nham_1362 1545092 - 1544742 - | hypothetical protein TERM 1459 1545645 - 1545623 - H 100 -17.8 -3.76125 | overlap 1545635 CGATCCCAAGGCAAA CCCGCAAACG CAC CGTTTGCGGG AACGGCGGAGCTTTG TERM 1460 1545771 - 1545748 - H 100 -8.8 -4.99861 | overlap 1545750 CATGAACGAGAAAAA CACGACTGCG ATTG CGCAGCCGCA ATCAGATCGCACGAG TERM 1461 1545769 - 1545750 - H 88 -11.4 -4.11322 | overlap 1545748 TGAACGAGAAAAACA CGACTGCG ATTG CGCAGCCG CAATCAGATCGCACG Nham_1363 1545850 - 1546602 + | hypothetical protein TERM 1462 1546614 - 1546586 - f 100 -12.4 -4.75309 | gap 1, overlap 1546588 TCAAACCGAACAAAA CACGTGGGCGGCG GTGA CGTCGCCCACG-G AGGGGCAATCATGAC TERM 1463 1546613 - 1546588 - f 100 -16.1 -3.98064 | overlap 1546586 AAACCGAACAAAACA CGTGGGCGGCG GTGA CGTCGCCCACG GAGGGGCAATCATGA TERM 1464 1548374 - 1548364 - g 72 -2.4 -4.72272 | overlap 1548366 TGGGCCGACCAAAAA GACC CCG GGGC GCGACCCCGCCAAGG Nham_1364 1546625 - 1548973 + | integrase catalytic subunit Nham_1365 1548991 - 1550058 + | hypothetical protein Nham_1366 1550062 - 1552407 + | hypothetical protein Nham_1367 1553378 - 1552440 - | hypothetical protein Nham_1368 1553863 - 1553492 - | hypothetical protein Nham_1369 1555236 - 1553860 - | UBA/THIF-type NAD/FAD binding fold Nham_1370 1556342 - 1555233 - | hypothetical protein TERM 1465 1555624 - 1555647 + g 75 -12.4 -3.67134 | opp_overlap 1555621 1555622, overlap 1555625 AGGAGCGCAAAAGCC TGGCGAGGCG CGCA TGCCTCGCCG TTGTTCACGTCCTTT TERM 1466 1555625 - 1555646 + g 72 -13.7 -2.79557 | opp_overlap 1555621 1555622, overlap 1555624 GGAGCGCAAAAGCCT GGCGAGGCG CGCA TGCCTCGCC GTTGTTCACGTCCTT TERM 1467 1556306 - 1556326 + g 83 -12.5 -3.95584 | overlap 1556315 TGGTAATGGCATTTT CCGCGGGCT GCG AACCCGCGG TTTGGTTGATAGACA Nham_1371 1556479 - 1557057 + | sigma-24 (FecI-like) TERM 1468 1557185 - 1557204 + G 95 -10.6 -4.56597 | overlap 1557187 1557188 CGACCCGGCAGCAGT CAGCGCGC GAGC GCGCGCGG TTTTTGAAAAGGCGG TERM 1469 1557188 - 1557203 + G 72 -11.8 -3.33744 | overlap 1557187 1557185 CCCGGCAGCAGTCAG CGCGCG AGCG CGCGCG GTTTTTGAAAAGGCG Nham_1372 1557054 - 1557476 + | hypothetical protein Nham_1373 1557473 - 1558282 + | hypothetical protein TERM 1470 1558321 - 1558306 - T 78 -9 -4.25104 | CCTCCGCTATCAAAA GGTGAC GTAC GTCACC AAGAAGCTCCGACCC Nham_1374 1560380 - 1558506 - | cyclic nucleotide-binding domain-containing protein TERM 1471 1559975 - 1559986 + g 75 -4.4 -4.68593 | TCACGGTCCGCATCA TCGA CATT TCGA TTTTTGGATCCTGCA Nham_1375 1560921 - 1560637 - | hypothetical protein TERM 1472 1561096 - 1561055 - H 81 -13 -3.53012 | gap 1, overlap 1561033 1561057 1561059 1561061 TCTGCTTTCCGCAAA TAGACACGGCCTCCGGCAG GGGAG CCGCCGGAGGCCGCAAC-A CCGGACGACGCGTGG TERM 1473 1561095 - 1561057 - H 100 -18.1 -3.34398 | overlap 1561033 1561055 1561059 1561061 TGCTTTCCGCAAATA GACACGGCCTCCGGCAG GGGAG CCGCCGGAGGCCGCAAC ACCGGACGACGCGTG TERM 1474 1561093 - 1561059 - H 100 -19.3 -3.24232 | overlap 1561033 1561057 1561055 1561061 CTTTCCGCAAATAGA CACGGCCTCCGGCAG GGGAG CCGCCGGAGGCCGCA ACACCGGACGACGCG TERM 1475 1561091 - 1561061 - H 100 -21.9 -3.18571 | overlap 1561059 1561057 1561055 TTCCGCAAATAGACA CGGCCTCCGGCAG GGGAG CCGCCGGAGGCCG CAACACCGGACGACG TERM 1476 1561120 - 1561097 - H 83 -14.6 -3.03124 | gap 1 CCGGAGGCCGCAACA CCGGACGACGC GTG GCGTCG-CCGG GTCGTCACCGTCTCG Nham_1376 1561255 - 1562061 + | ISGsu2, transposase TERM 1477 1562863 - 1562885 + G 84 -15.6 -3.30124 | GGAGCGGATGCGCCG CCTGGTGGCG CGA CGCTACCAGG TTGTCCGGCATCGGA TERM 1478 1563710 - 1563697 - g 100 -9.5 -5.00616 | opp_overlap 1563698, overlap 1563698 GCGCCCGCCAAAAAA GGCGC GCGG GCGCC TCAATCCGGCAAGGC Nham_1378 1562498 - 1563733 + | transposase IS116/IS110/IS902 Nham_1379 1564852 - 1563752 - | transposase, mutator type TERM 1479 1563920 - 1563974 + g 76 -9.1 -4.08216 | gap 2 GCGCCGCCAGCTCTG GCCGATGGCGG-GGTAG-CGCTGGCCC CAG GGGCCGGCCTCGAACGCCGCCAGCGCC TTTTCGGCAGCATCG flgH 1566156 - 1565398 - | flagellar basal body L-ring protein TERM 1480 1566101 - 1566083 - G 70 -11.6 -3.22298 | TCGATGGACGAGCAA CCGCTGGC GAG GCCGGCGG CCGCCAGCAACGTGC flgA 1567283 - 1566162 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 1481 1567395 - 1567356 - R 95 -10.2 -4.86621 | gap 1, overlap 1567358 1567361 1567363 ATGCTCAATTAAAAA GATCAGAGTCTGGTTCAAC GCA GTTGAATCAGACTCT-AGC GGAACAGCGCGGATG TERM 1482 1567394 - 1567358 - R 86 -11.7 -4.05402 | overlap 1567356 1567361 1567363 GCTCAATTAAAAAGA TCAGAGTCTGGTTCAAC GCA GTTGAATCAGACTCTAG CGGAACAGCGCGGAT TERM 1483 1567391 - 1567361 - R 85 -15.6 -3.05624 | overlap 1567358 1567356 1567363 CAATTAAAAAGATCA GAGTCTGGTTCAAC GCA GTTGAATCAGACTC TAGCGGAACAGCGCG TERM 1484 1567389 - 1567363 - R 73 -12.4 -3.06434 | overlap 1567361 1567358 1567356 ATTAAAAAGATCAGA GTCTGGTTCAAC GCA GTTGAATCAGAC TCTAGCGGAACAGCG flgG 1568179 - 1567391 - | flagellar basal body rod protein FlgG flgF 1568959 - 1568192 - | flagellar basal body rod protein FlgF TERM 1485 1569378 - 1569354 - g 70 -7.8 -4.10161 | gap 1, overlap 1569355 GATCAGGCCGGAAAA GCGGCA-GCCG AGGG CGACGCGCCGC CCGCTCCCAGGAGCA TERM 1486 1569442 - 1569458 + G 77 -2.1 -5.06816 | overlap 1569434 1569445 TTTGCCTGGTCGGCG GCGCCGG CAC CTGGTTC TTTTTCTTCCGCCAT TERM 1487 1569445 - 1569455 + G 74 -4.6 -4.63592 | overlap 1569434 1569442 GCCTGGTCGGCGGCG CCGG CAC CTGG TTCTTTTTCTTCCGC fliL 1569249 - 1569821 + | flagellar basal body-associated protein FliL fliM 1569834 - 1571039 + | flagellar motor switch protein FliM TERM 1488 1571401 - 1571431 + G 93 -14.6 -4.07568 | GGCCGTGGCCAGTGA TGCCCGCTCGGTCG CCG CGGCGGCGCGGGCA TTTTCCGAACGCAAA Nham_1387 1571036 - 1571470 + | hypothetical protein Nham_1388 1571467 - 1572267 + | hypothetical protein TERM 1489 1575696 - 1575727 + G 77 -14.4 -2.94416 | gap 1 ATCATCTCCAATCTC ACCGGGCGCGAGGCG ATC CGCCT-GCGCTCGGA TATCTACTGGGCGTC Nham_1389 1572366 - 1576175 + | tetratricopeptide TPR_4 protein fliP 1576966 - 1576211 - | flagellar biosynthesis protein FliP TERM 1490 1576913 - 1576889 - G 100 -18.6 -3.54129 | GATATCCTGCGCAAA CGCCGGGTCG GCGAG CGACCCGGCG GCTATCAGAACGAGA Nham_1391 1577901 - 1576963 - | hypothetical protein TERM 1491 1577767 - 1577797 + g 70 -11.8 -3.14132 | GGCGGCGTCGATCAC CGCCAGACGGGG CATTCGT CCCCGATTGGCG TTGGTGCCGAGACGG TERM 1492 1578143 - 1578125 - H 72 -4.5 -4.57073 | overlap 1578109 CATTCGTCGCAAAAA TGCCTTG GCTCG CGAGGCA CCGGCTCCGTCCGGA flgB 1578260 - 1578667 + | flagellar basal body rod protein FlgB flgC 1578697 - 1579122 + | flagellar basal body rod protein FlgC fliE 1579137 - 1579448 + | flagellar hook-basal body protein FliE fliQ 1579593 - 1579856 + | flagellar biosynthesis protein FliQ TERM 1493 1580052 - 1579998 - f 83 -9.5 -4.27584 | gap 2, overlap 1580004 1580005 ATGCTCAATTCAAAA GGATAAGGC--GAGGGTCTGATTCAAC GAA GTTGGATCAGACCCTCGGGCATCATGC ACATCGATATCTCGC TERM 1494 1580044 - 1580004 - f 95 -15.5 -3.70033 | overlap 1579998 1580005 AATTCAAAAGGATAA GGCGAGGGTCTGATTCAAC GAA GTTGGATCAGACCCTCGGG CATCATGCACATCGA TERM 1495 1580043 - 1580005 - f 100 -19 -2.80935 | overlap 1580004 1579998 ATTCAAAAGGATAAG GCGAGGGTCTGATTCAAC GAA GTTGGATCAGACCCTCGG GCATCATGCACATCG TERM 1496 1580553 - 1580587 + G 91 -16.3 -3.57263 | opp_overlap 1580539 ATGCCGAGCGGCGAC GTGGCGGCGCTGGCG ACGCG CGCCTTCGCCGCCGC TTTCAAGATCGGCCT fliR 1580049 - 1580819 + | flagellar biosynthesis protein FliR TERM 1497 1580898 - 1580884 - g 76 -5.6 -4.66609 | overlap 1580886 GATCCGACTCAAAAA CGCCTC GAC GATGCG CTCGAGCGTGGCGAC flhB 1580833 - 1581912 + | flagellar biosynthesis protein FlhB TERM 1498 1582577 - 1582542 - g 70 -12.4 -3.21595 | overlap 1582529 1582544 1582545 AAGCGCCAGCAGGAA GAGGTGCGCGTCGCCG CTGC CGACGGCGCGCACGGC CGCTGGCTGCGGATG TERM 1499 1582575 - 1582544 - g 76 -13.6 -3.17051 | overlap 1582529 1582542 1582545 GCGCCAGCAGGAAGA GGTGCGCGTCGCCG CTGC CGACGGCGCGCACG GCCGCTGGCTGCGGA TERM 1500 1582574 - 1582545 - g 83 -17.1 -2.50016 | overlap 1582529 1582544 1582542 CGCCAGCAGGAAGAG GTGCGCGTCGCCG CTGC CGACGGCGCGCAC GGCCGCTGGCTGCGG TERM 1501 1583655 - 1583603 - g 72 -12 -3.28416 | gap 2, opp_overlap 1583609, overlap 1583606 1583609 CATCATGCAGATCAA GC-AGAACGCCAACCGC-GCCGCCGC GCT GGTGCGGCAACTGCTGGCGTTCTCGC GGCGGCAGACCCTGC Nham_1398 1582068 - 1584629 + | multi-sensor hybrid histidine kinase Nham_1399 1585689 - 1584727 - | hypothetical protein TERM 1502 1585011 - 1584997 - G 76 -10 -3.91897 | GGCCGGATCGAGAAA CAGCAG AAC CTGCTG AAAGATTCTCGAAGA TERM 1503 1585665 - 1585608 - G 78 -14.9 -3.04792 | gap 1, overlap 1585654 TCAGTACCCGCAACA GGGTCGGACGGA-TGTCCACGCCGTCCC GGC GGGACAGCGTCAACAACCCGTCGAAGCC GGGAAACATCGGAGG TERM 1504 1586140 - 1586128 - H 90 -4.7 -5.45802 | opp_overlap 1586128 GCGTCAAAACAAAAA GCTGG AGC CCGGC TTTGATTCTATCAAA Nham_1400 1586162 - 1586932 + | hypothetical protein Nham_1401 1587679 - 1587101 - | hypothetical protein Nham_1402 1588254 - 1587676 - | hypothetical protein TERM 1505 1588332 - 1588379 + r 72 -6.5 -4.3534 | gap 3, opp_overlap 1588363, overlap 1588333 GACAGACGCTGTATG ACCTAGAGCCCTTTCAGTTCTGAT GGA ATCAGAACCG---GGGCTCTAGGG TTTTGATGCTTCACG Nham_1403 1590791 - 1588509 - | penicillin-binding protein 1A Nham_1404 1591112 - 1591627 + | hypothetical protein TERM 1506 1592742 - 1592767 + G 70 -11.7 -3.19602 | overlap 1592741 1592718 AATCGCCGCCATGCT CGGCGGCTCGC TGGT GCTTGCCGCCG TCTTCGTCTGGCACG TERM 1507 1592999 - 1593022 + G 75 -13.8 -3.05384 | GCGGCGCGGCGCTTG CCGGCCGCAC CATG GTGCGGGCGG TTCACTACAAGCGGG Nham_1405 1591912 - 1593471 + | major facilitator transporter Nham_1406 1593621 - 1593785 + | Flp/Fap pilin component TERM 1508 1594152 - 1594167 + F 73 -11.8 -3.05384 | opp_overlap 1594151 AGACCGGCACGGAAG CCGGCG GCGG CGCCGG TTGCGTCGCGCACGA Nham_1407 1594352 - 1594843 + | hypothetical protein Nham_1408 1594836 - 1596104 + | hypothetical protein Nham_1409 1596564 - 1596277 - | excinuclease ABC subunit C TERM 1509 1596573 - 1596607 + H 83 -5.1 -5.10461 | gap 2, opp_overlap 1596572 1596575, overlap 1596575 AGCTCATGCATGAAT GA-TG-GATTGCCGGGT CGA GCCCGGCAATGACAATC TTTTTGTTGCATCGC TERM 1510 1597794 - 1597772 - g 74 -6.1 -4.41494 | CACGCTCAACGAAAA GCGCGAGGC GGTCG GCTACGCGC CGATCGAGGGCGGCG Nham_1410 1596648 - 1597823 + | Phage portal protein, HK97 Nham_1411 1597892 - 1598104 + | hypothetical protein TERM 1511 1598261 - 1598234 - g 72 -14.1 -2.71712 | overlap 1598233 1598247 CGCCGGTCGTGAAAT CGCCGCGCCAA AAGCCG CCGGCGCGGCG CAAGCCAGCAAAGCG TERM 1512 1598260 - 1598247 - g 76 -9.5 -4.07687 | overlap 1598234 1598233 ATCGCCGCGCCAAAA GCCGC CGGC GCGGC GCAAGCCAGCAAAGC Nham_1412 1598104 - 1598292 + | hypothetical protein Nham_1413 1598382 - 1599029 + | peptidase U35, phage prohead HK97 Nham_1414 1599452 - 1599072 - | hypothetical protein TERM 1513 1599631 - 1599618 - g 77 -3.7 -4.82901 | overlap 1599620 GCGGCTGGAGAAAAA GCGCG GCGA CGTGC TGCTGGAGGAAAAGG Nham_1415 1599481 - 1600734 + | phage major capsid protein, HK97 TERM 1514 1600745 - 1600770 + T 75 -10.4 -3.67792 | GTTGATCTTTCGAGT GACGCACGGC TTCGAT GCGGTGCGTC TTTCCCTCCCTCTCC TERM 1515 1600837 - 1600817 - T 70 -3.8 -4.68209 | opp_overlap 1600817 AGGTGAAGAAACAAA CGGCGCGC TCCTG GTGAGCCG TTCTCGTTTCCAGAC Nham_1416 1601673 - 1600912 - | peptidase S1 and S6, chymotrypsin/Hap TERM 1516 1601238 - 1601184 - G 73 -11.4 -3.64703 | gap 3 GTCCGGTCACGGAAA GGC-TCGCG-GCGCGGGCCACG-CCGC CGCT ACGGCCGTCGCCGGCGATCGCGACGCC CATGCCGACAACAGT Nham_1417 1601739 - 1602308 + | phiE125 gp8 hypothetical protein Nham_1418 1602334 - 1602744 + | gene transfer agent (GTA) like protein TERM 1517 1602826 - 1602799 - g 75 -14.2 -2.73875 | gap 1, overlap 1602796 TGCTGCTGAAGATGA GCGACGGCG-CGA GTT TCGTCACCGTCGC GGGATTGCGCAGCCG Nham_1419 1602759 - 1603166 + | Phage major tail protein, TP901-1 TERM 1518 1603348 - 1603325 - g 71 -5.3 -4.44046 | overlap 1603327 TCCATGCCAAACAAA CATC-GCGGCG AGAT CGCCGCTGA-G CTTGGCGGGCGGCAG TERM 1519 1603347 - 1603327 - g 74 -9 -3.82628 | gap 1, overlap 1603325 CATGCCAAACAAACA TC-GCGGCG AGAT CGCCGCTGA GCTTGGCGGGCGGCA TERM 1520 1603607 - 1603584 - g 76 -9.6 -4.07568 | opp_overlap 1603582 CTGGCTTTGTCAAAA TCGCGGCA GAACTGAT TGCCGCGA CCTTCGATGACGGCG Nham_1420 1603313 - 1603633 + | gene transfer agent (GTA) like protein Nham_1421 1603630 - 1603842 + | hypothetical protein TERM 1521 1603922 - 1603896 - g 78 -6.4 -4.63527 | opp_overlap 1603895, overlap 1603900 GTATCACCGCAAAAA CTCAGGCGCTGA CGA TCAGCGCGGGCG GCTTTGCGCGGGCGA Nham_1422 1603835 - 1604419 + | gene transfer agent (GTA) like protein Nham_1423 1604559 - 1605200 + | hypothetical protein TERM 1522 1605403 - 1605424 + G 70 -7.3 -4.09243 | gap 1 CGATCTGGCGGTCGA CG-GCCTGGA AAT TTCAGGCGCG TTTTCCGACGATGTC TERM 1523 1605679 - 1605700 + G 73 -8.7 -4.07568 | CGACGCCAGATGCCG GGTCGATCT GACC AGTTCGACC TTTTGCCACAGCGGC Nham_1424 1605197 - 1606093 + | phage protein Nham_1425 1606107 - 1606553 + | putative phage cell wall peptidase, NlpC/P60 TERM 1524 1609215 - 1609270 + G 72 -8 -4.18018 | gap 1 ACGACGCCGCGATGT CGCGGCG-GGCCGAGGTCTGGCTGCAG GAC CTGTGGGCGGGCCGCGAAAGCGCCGCG TTTTCGCTCGGGCCG TERM 1525 1609471 - 1609449 - g 77 -12.6 -3.60627 | CGACGCCACGGCAAA CGCGGCCGGC GAT ACCGGCGGCG CTCGGGCCGGTTCAG Nham_1426 1606553 - 1610407 + | gene transfer agent (GTA) orfg15, like protein Nham_1427 1610414 - 1611844 + | hypothetical protein Nham_1428 1613754 - 1611946 - | hypothetical protein Nham_1429 1613937 - 1614599 + | putative glycohydrolase TERM 1526 1614611 - 1614582 - f 77 -10.7 -3.84451 | gap 1, overlap 1614560 CTTTCGAAATGGAAA GCCGCGCTGACGAT CTG ACCGCC-GCGCGAC GGTCTCGCGCAATCA Nham_1430 1614650 - 1614889 + | hypothetical protein Nham_1431 1614913 - 1615308 + | hypothetical protein TERM 1527 1615353 - 1615329 - g 76 -9.3 -3.9712 | gap 1, opp_overlap 1615348 TCACCGCAGCAGAAA TC-GCGGCCG GCCTCG CGGCCGCCGA AGCCATCGTCAGCGC Nham_1432 1615310 - 1615561 + | hypothetical protein Nham_1433 1615714 - 1616385 + | two component transcriptional regulator Nham_1434 1616375 - 1617772 + | periplasmic sensor signal transduction histidine kinase Nham_1435 1617882 - 1618316 + | LipA a lipoprotein TERM 1528 1618400 - 1618385 - f 83 -8.2 -4.57569 | opp_overlap 1618385 1618388, overlap 1618388 TGATCTTGCGAAAAA CACCGC TTTG GCGGCG CCAGAGCCTCGCTTC TERM 1529 1618401 - 1618442 + F 100 -19.7 -3.32354 | gap 1, opp_overlap 1618388, overlap 1618388 1618385 1618401 1618402 1618404 ACCGCTTTGGCGGCG C-CAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTATG GTTTTGATTTGACGC TERM 1530 1618401 - 1618443 + F 100 -19.5 -4.54727 | gap 2, opp_overlap 1618388, overlap 1618388 1618385 1618401 1618402 1618404 ACCGCTTTGGCGGCG CC--AGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTATGG TTTTGATTTGACGCG TERM 1531 1618402 - 1618440 + F 100 -23.4 -3.22314 | opp_overlap 1618388, overlap 1618388 1618385 1618401 1618401 1618404 CCGCTTTGGCGGCGC CAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTA TGGTTTTGATTTGAC TERM 1532 1618404 - 1618438 + F 100 -26 -3.16315 | opp_overlap 1618388, overlap 1618388 1618385 1618402 1618401 1618401 GCTTTGGCGGCGCCA GAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTC TATGGTTTTGATTTG TERM 1533 1619057 - 1619083 + G 81 -13.7 -3.64487 | gap 1, overlap 1619056 CTGACCGCCAGCGGG CGCT-GGGCCGC ATCG GCGGCCCTGGCG TTGTTGAAGATCTGG TERM 1534 1619150 - 1619162 + G 71 -4.7 -4.39828 | overlap 1619148 1619151 TCGATACCCTCAATG GCCGG CTG CCGGG TTTTCTACGCATCTT Nham_1436 1618585 - 1619979 + | hypothetical protein TERM 1535 1620741 - 1620702 - g 100 -19.2 -3.53811 | CCTACGTGGGTGAAA CCGGCGATCGCCGTGCCG ATCT CGGTGCGGCGATCGCGGG GGCCGCCAATGGCAT TERM 1536 1621168 - 1621147 - g 72 -12.3 -3.32268 | gap 1, overlap 1621148 CAACGAGCCGGAGAA GTCG-CGCGC CGT GCGCGACGAC GCCCGCCGCGCGCTC Nham_1437 1620146 - 1621249 + | cytochrome c-type biogenesis protein CycH / CcmH TERM 1537 1621371 - 1621385 + G 75 -3.5 -4.82901 | GTGCTGAACGCATTG CGCGA CTCCA TCGTG TTTTTCTCGACGCCG Nham_1438 1621284 - 1621772 + | cytochrome c-type biogenesis protein CcmE TERM 1538 1622768 - 1622788 + G 73 -11.1 -3.61715 | overlap 1622769 1622785 TATATCTGGCGTGCC TCCGCTCTG AAG CAGGGCGGG TTGTTCGCGCCGATC Nham_1439 1621769 - 1623751 + | cytochrome c-type biogenesis protein CcmF TERM 1539 1623857 - 1623870 + G 73 -8.1 -4.08216 | overlap 1623855 GCTCGGTGCGTGGGG CAGGC TCCT GCCTG TTTTCGGCACCCTCC Nham_1440 1623771 - 1624358 + | cytochrome C biogenesis protein TERM 1540 1624541 - 1624557 + F 71 -12.3 -2.87564 | opp_overlap 1624540, overlap 1624531 GCGAGCGGAGGCAAC GCCGTTC TTC GAACGGC TATGTCCGCGCATGA Nham_1441 1624754 - 1626325 + | peptidase S1C, Do TERM 1541 1626443 - 1626467 + F 86 -14.2 -3.20991 | TGACGGCACTTTCCG GGGGACGGGC CAAAA GCCCGCCCCC TTGAGTTGCCTTCCG TERM 1542 1626513 - 1626548 + F 91 -8.2 -5.055 | gap 1, opp_overlap 1626512, overlap 1626514 1626515 CTTCGTCGGAAGGAT TAGGGCGGTGGAG-TCG CCC CAAGCTCCACCGCCCGC TTTTTTGCCGATTGC TERM 1543 1626514 - 1626547 + F 77 -11.7 -3.62577 | gap 1, opp_overlap 1626512, overlap 1626513 1626515 TTCGTCGGAAGGATT AGGGCGGTGGAG-TCG CCC CAAGCTCCACCGCCCG CTTTTTTGCCGATTG TERM 1544 1626515 - 1626546 + F 83 -15.2 -2.76823 | gap 1, opp_overlap 1626512, overlap 1626514 1626513 TCGTCGGAAGGATTA GGGCGGTGGAG-TCG CCC CAAGCTCCACCGCCC GCTTTTTTGCCGATT Nham_1442 1626657 - 1627349 + | two component transcriptional regulator Nham_1443 1628047 - 1627598 - | cytochrome c, class I TERM 1545 1627925 - 1627940 + g 70 -10.4 -3.62046 | ACCGCGTTCGACCGA GGCGCT CGCA AGCGCC TTATTGAACGACTGC TERM 1546 1629706 - 1629722 + G 84 -4.3 -5.1675 | overlap 1629707 TTCACGATGACATCC GTGCTGG CCG CCGGCAA TTTTTTACTCGGTGG Nham_1444 1628614 - 1629864 + | major facilitator transporter Nham_1445 1630253 - 1630636 + | hypothetical protein Nham_1446 1630664 - 1631650 + | hypothetical protein Nham_1447 1632455 - 1633915 + | periplasmic sensor signal transduction histidine kinase TERM 1547 1636222 - 1636278 + G 84 -15.2 -3.35224 | overlap 1636264 GGCGTTCTCTACGAG GTCGATATGCGGCTGCGGC-CTTCCGGC CGC GCCGGCCCCGTCGC-GTCGCATATCGAC TCTTTCGCCGACTAT Nham_1448 1633912 - 1636875 + | glutamate-ammonia-ligase adenylyltransferase Nham_1449 1639342 - 1637015 - | periplasmic sensor signal transduction histidine kinase TERM 1548 1637860 - 1637876 + g 73 -2.9 -4.73613 | overlap 1637842 1637862 TCGCCCGCAGCCGGA GGTCGTT GTC GACGAGC TTTTGTTCGTGCTCC TERM 1549 1638956 - 1638901 - G 74 -12.7 -3.31792 | gap 3, overlap 1638950 TGATGAGCTCCAGAA TCCG-GCTGCTCTCGC-CGGGCGCCG CCTCGAT CGGCACCCGCGCGAGAAC-GCGCTGA TCGGCGCCGGTGACG Nham_1450 1641006 - 1639624 - | cation diffusion facilitator family transporter TERM 1550 1640035 - 1640047 + g 76 -7.7 -4.37886 | GACCTCGAGGTCGAT GCTGA CAG TCAGC TTTTCTCCGAGATCG TERM 1551 1641069 - 1641043 - R 72 -5.9 -4.4767 | gap 1, opp_overlap 1641045, overlap 1641045 CCACCCAGGATAAAA GCGTGCGCGATT GCGC AATCGC-CACTC ATTCGCGGCTTGGTT Nham_1451 1641512 - 1641156 - | hypothetical protein Nham_1452 1641716 - 1642015 + | histone-like DNA-binding protein TERM 1552 1642016 - 1642041 + F 93 -11.1 -4.62336 | overlap 1642018 1642021 AAAGACGCGGTATGA TGCAGGGGCCC TTCG GGGCCCTTGTG TTTTTGACCTGCCCT TERM 1553 1642018 - 1642039 + F 93 -13.7 -3.92746 | overlap 1642016 1642021 AGACGCGGTATGATG CAGGGGCCC TTCG GGGCCCTTG TGTTTTTGACCTGCC TERM 1554 1642021 - 1642036 + F 86 -11.8 -4.08349 | overlap 1642018 1642016 CGCGGTATGATGCAG GGGCCC TTCG GGGCCC TTGTGTTTTTGACCT TERM 1555 1642076 - 1642114 + F 100 -15.3 -4.64676 | CAGGTTGGATGCGTG CCGCC-AGCCGGTTCGGTC GGT GGCCGA-CCGGCGCGGCGG TTTTATTGCCGGTCG Nham_1453 1642301 - 1642786 + | (2Fe-2S)-binding Nham_1454 1642871 - 1645210 + | carbon-monoxide dehydrogenase TERM 1556 1645646 - 1645662 + G 78 -3 -5.00884 | gap 1, opp_overlap 1645646 AAGACCAACAAGCGA TCGATCG AAGC CGA-CGA TTTTTTCAAGGGACT Nham_1455 1645232 - 1646032 + | carbon-monoxide dehydrogenase TERM 1557 1646074 - 1646096 + F 100 -12.7 -4.67038 | overlap 1646076 TTTGGTCCGCGTTGA TAGCGCGCC CTTGC GGCGCGCTG TTTTCGTTTTGCGAC TERM 1558 1646076 - 1646094 + F 87 -13.1 -3.94465 | overlap 1646074 TGGTCCGCGTTGATA GCGCGCC CTTGC GGCGCGC TGTTTTCGTTTTGCG TERM 1559 1646313 - 1646340 + G 81 -4 -5.06451 | gap 1, overlap 1646301 1646300 GATTGACGTGCGCAG CCTGGTTCCGGCG CAG CGCCACG-CCAGG TTTTTTCAGATCGTC Nham_1456 1646263 - 1646523 + | hypothetical protein TERM 1560 1646526 - 1646555 + F 83 -12.1 -3.85698 | overlap 1646516 1646527 CAAGGTCGCTTGATT CGCACGCGGTTAG CTCA CGAACCGCGTGCC TTTGTCGACAAGGCC TERM 1561 1646527 - 1646554 + F 84 -15.6 -2.91276 | overlap 1646516 1646526 AAGGTCGCTTGATTC GCACGCGGTTAG CTCA CGAACCGCGTGC CTTTGTCGACAAGGC TERM 1562 1646599 - 1646625 + F 91 -18 -3.17075 | GATCGCTTGTCGACC GCGCCGGCGG CCTCACC CCGCCGGCGC TTCCCTTCGAAAGGA Nham_1457 1646649 - 1648004 + | hypothetical protein Nham_1458 1648016 - 1648543 + | hypothetical protein TERM 1563 1648779 - 1648749 - g 70 -12.4 -3.17212 | opp_overlap 1648760 1648763, overlap 1648750 CGACTACCTCACGAA CGGCGCGCGCGACG CGG CGTCGAGCGTGCCC TCTGCGGGTGCCGTC TERM 1564 1648778 - 1648750 - g 76 -15.9 -2.50113 | opp_overlap 1648760 1648763, overlap 1648749 GACTACCTCACGAAC GGCGCGCGCGACG CGG CGTCGAGCGTGCC CTCTGCGGGTGCCGT Nham_1459 1648555 - 1648875 + | hypothetical protein Nham_1460 1651425 - 1648930 - | glycogen/starch/alpha-glucan phosphorylase TERM 1565 1650097 - 1650119 + g 71 -9 -3.76224 | overlap 1650100 GAAGGCGAGATGCCC CATGCGGACG CGG CGGCCGCCTG TTTCGTCGATCAGCG Nham_1461 1654368 - 1651516 - | malto-oligosyltrehalose synthase TERM 1566 1651777 - 1651756 - G 70 -10.1 -3.55801 | overlap 1651746 ATCAAGCCGGTCAAA CGCCGGC CAGGTCAT GCCGGCG TCCGTGAATGGCGCA TERM 1567 1652312 - 1652325 + g 72 -3.8 -4.59773 | overlap 1652311 CTTGTTTGCAGCTTG GCCT CGCGGC AGGC TTTTTCGGCGTAGGC TERM 1568 1652875 - 1652859 - G 72 -2.1 -4.7629 | overlap 1652861 GCAGGAAGTCAAAAA TCCCGTC ATC GGCGGCA AACCACTCCTGCCGC Nham_1462 1656131 - 1654368 - | malto-oligosyltrehalose trehalohydrolase TERM 1569 1655519 - 1655499 - G 77 -4 -4.85599 | gap 2, opp_overlap 1655472 1655469 CGCATCGCAGAAAAA CTGCGGTGCG TAG CGC-CCG-AG ATAATTTCCCTCCGG Nham_1463 1658206 - 1656128 - | glycogen debranching protein GlgX TERM 1570 1658153 - 1658134 - G 86 -6.4 -5.0133 | CATGGGCTGAAAAAA GCGCAAAA TTCG TTCCGCGC CCATCCCAGTTCGAA Nham_1464 1660353 - 1658203 - | glycogen branching enzyme Nham_1465 1663635 - 1660369 - | trehalose synthase-like TERM 1571 1661609 - 1661629 + g 72 -4.5 -4.63527 | overlap 1661611 1661612 GTTCCCTCGCGCGAC CCCTGCCGC ACG GCGGCGATG TTTTTGGCGTCATAG TERM 1572 1662144 - 1662154 + g 76 -6.8 -4.40561 | opp_overlap 1662144 TGGCGACGCAGAGCA CGAC CTC GTCG TTATTTTTCCGCACG TERM 1573 1663705 - 1663667 - R 90 -7.2 -5.16132 | GACAGCAAAACAAAA GCGCGGGATCGCGGAGCG GAT CGATCCTCAAGCGCACGC CCCCCCATTCGATGG Nham_1466 1665617 - 1663644 - | alpha amylase, catalytic region TERM 1574 1665941 - 1665959 + G 74 -12.4 -3.4678 | AGCAACCCGTTGTTA TCGTCGCC GAC GGCGGCGA TTGTCGTGTGCCGGT TERM 1575 1666983 - 1667039 + G 71 -10.8 -3.53091 | gap 2, opp_overlap 1666979, overlap 1666985 1666988 1666989 GGGGTTTAATACCGC TGGACTCGAGGCGAGCGGCTTCGCACCG TTT CGG-GAGATGCTGCGCGCCTCGA-TGCG TTTCGCGGGCGCGAT TERM 1576 1666985 - 1667038 + G 72 -13.7 -2.71712 | gap 1, opp_overlap 1666979, overlap 1666983 1666988 1666989 GGTTTAATACCGCTG GACTCGAGGCGAGCGGCTTCGCACCG TTT CGG-GAGATGCTGCGCGCCTCGATGC GTTTCGCGGGCGCGA TERM 1577 1666988 - 1667035 + G 86 -18.4 -2.64155 | gap 1, opp_overlap 1666979, overlap 1666985 1666983 1666989 TTAATACCGCTGGAC TCGAGGCGAGCGGCTTCGCACCG TTT CGG-GAGATGCTGCGCGCCTCGA TGCGTTTCGCGGGCG TERM 1578 1667289 - 1667306 + G 73 -6.9 -4.3739 | overlap 1667296 GGTGATGATGTTCGA GCGCGGT CATG ACGGCGC TTTTATCGGGCCGTC Nham_1467 1665784 - 1667724 + | 4-alpha-glucanotransferase Nham_1468 1668305 - 1667793 - | hypothetical protein TERM 1579 1668023 - 1668038 + g 70 -10.4 -3.64682 | overlap 1668035 AATTCAGCAATTCCA GCGGCA ACCC TGCCGC TTTCGCGGTTTCGTA Nham_1469 1669983 - 1668373 - | periplasmic sensor signal transduction histidine kinase Nham_1470 1671024 - 1670155 - | 3-hydroxyisobutyrate dehydrogenase TERM 1580 1670790 - 1670776 - G 77 -12.8 -3.54424 | opp_overlap 1670778 CTTCATTCCGGCAAA GGCGCC GGC GGCGCC GATCGTGATTGCGCG TERM 1581 1671066 - 1671083 + H 74 -7.7 -4.11216 | gap 1, overlap 1671051 GCCGTCATCGCGGCT GAGCCTGC TGA GC-GGCTC TTTTGCGGATAAGAG TERM 1582 1671537 - 1671525 - g 81 -10.5 -4.11216 | opp_overlap 1671524 1671525 GTCCGAGCCGCAAAA GCCGG ATT CCGGC GTTATCCATCACATC Nham_1471 1671331 - 1671720 + | glyoxalase/bleomycin resistance protein/dioxygenase Nham_1472 1671807 - 1672991 + | ATP-binding protein involved in chromosome partitioning TERM 1583 1673026 - 1673060 + F 81 -13 -3.55548 | opp_overlap 1673052, overlap 1673027 GCGACCCACCTGGAG CCTTTTCGCTCCTGAT TCC ATCAGAAGCGAAAAGC TTTAGCAGGCTGTTG TERM 1584 1673027 - 1673059 + F 87 -16.5 -2.73007 | opp_overlap 1673052, overlap 1673026 CGACCCACCTGGAGC CTTTTCGCTCCTGAT TCC ATCAGAAGCGAAAAG CTTTAGCAGGCTGTT Nham_1473 1673142 - 1674251 + | transposase, IS4 Nham_1474 1674566 - 1675654 + | twin-arginine translocation pathway signal Nham_1475 1677402 - 1675792 - | TRAP C4-dicarboxylate transport system permease DctM subunit TERM 1585 1676891 - 1676861 - G 71 -13.3 -3.05993 | GCACCGAGATACATA TCGCCGACCGACT TTCCG AGCTGGTCGGCGA GCACGATCAGCACCA Nham_1476 1677938 - 1677399 - | tripartite ATP-independent periplasmic transporter DctQ moaA 1679201 - 1678170 - | molybdenum cofactor biosynthesis protein A TERM 1586 1678978 - 1678937 - G 74 -14.3 -2.65264 | overlap 1678952 GTATCAGCGACATCA CGTTGCGGCGAACCAGCGG CTCG CCGCCGGTCAGCCGCAGCT TGCGCACGCCCTTGG Nham_1478 1679787 - 1679317 - | hypothetical protein TERM 1587 1679839 - 1679799 - R 71 -12.6 -2.51464 | overlap 1679798 GCATGATCGATCAAT CCGTCGC-TTGAATGCGGCG AAC CGCCGCATTCCCCGCG-CGG GACCATAGAAGTGTG Nham_1479 1680631 - 1679936 - | phosphoglycolate phosphatase Nham_1480 1680951 - 1681649 + | ribose-5-phosphate isomerase A Nham_1481 1681672 - 1682181 + | hypothetical protein TERM 1588 1683042 - 1683072 + G 70 -7.5 -4.07568 | gap 1, opp_overlap 1683051, overlap 1683043 GGGCGTCGCCATCAA TCCGAACAACGGCG GCAT CGCCGTTGA-CGGC TTTTCGCAAACGAAC TERM 1589 1683064 - 1683051 - g 71 -9.5 -3.68936 | opp_overlap 1683043 1683042 CATCAATCCGAACAA CGGCG GCAT CGCCG TTGACGGCTTTTCGC Nham_1482 1682200 - 1683585 + | glutathione reductase TERM 1590 1683758 - 1683809 + F 100 -21.2 -4.41494 | gap 1, opp_overlap 1683747, overlap 1683759 1683762 TATACCGGCCCTTCA CGA-CCGGTTGGAGTCTGATTCAAC TGT GTTGAATCAGACTCCAACCGTATCC TTTTGATTGAGCATG TERM 1591 1683759 - 1683808 + F 100 -24.7 -3.24414 | gap 1, opp_overlap 1683747, overlap 1683758 1683762 ATACCGGCCCTTCAC GA-CCGGTTGGAGTCTGATTCAAC TGT GTTGAATCAGACTCCAACCGTATC CTTTTGATTGAGCAT TERM 1592 1683762 - 1683804 + F 100 -31 -3.14708 | opp_overlap 1683747, overlap 1683759 1683758 CCGGCCCTTCACGAC CGGTTGGAGTCTGATTCAAC TGT GTTGAATCAGACTCCAACCG TATCCTTTTGATTGA TERM 1593 1684873 - 1684834 - g 82 -14.2 -3.33261 | GCTCAATCCGGACAA CGAGCCGGGGCGTCTGAC CCTC ATCAGCCGCTTCGGCTCG GACAAGATCGGCGAT Nham_1483 1683899 - 1685287 + | phospho-2-dehydro-3-deoxyheptonate aldolase Nham_1484 1685289 - 1685642 + | diacylglycerol kinase TERM 1594 1686141 - 1686130 - g 70 -7.2 -3.9712 | opp_overlap 1686123 GTATTCGACGAGAAA CGCG TGTT CGCG AGAGGACCGGTCGGG TERM 1595 1686415 - 1686425 + G 76 -6.8 -4.4767 | GACGAGCTGGTGTTC GACG GCG CGTC TTTTGTGCTGAATGC TERM 1596 1686897 - 1686913 + G 76 -13.7 -3.14229 | opp_overlap 1686890, overlap 1686896 AGAAAATTTGCAGGC GCGTGCC CGC GGCACGC TGTTGATGGCGATCT TERM 1597 1687348 - 1687332 - g 73 -10.8 -3.65812 | CGTCGCCGAATACAA GCGCCG GCAGG CGGCGC CGGGCGTCAAGGTCA nadE 1685749 - 1687500 + | NAD synthetase TERM 1598 1687555 - 1687511 - T 89 -15.9 -3.30441 | opp_overlap 1687515, overlap 1687513 1687514 GATGACGGCGTAGAA GACGCCAGAGTCTGATTCAAC TGC GTTGAATCAGACTCTGGTTTT ATCCTTTTGATTGAG TERM 1599 1687553 - 1687513 - T 100 -18.5 -3.21924 | opp_overlap 1687515, overlap 1687511 1687514 TGACGGCGTAGAAGA CGCCAGAGTCTGATTCAAC TGC GTTGAATCAGACTCTGGTT TTATCCTTTTGATTG TERM 1600 1687552 - 1687514 - T 100 -22 -2.5294 | opp_overlap 1687515, overlap 1687513 1687511 GACGGCGTAGAAGAC GCCAGAGTCTGATTCAAC TGC GTTGAATCAGACTCTGGT TTTATCCTTTTGATT TERM 1601 1687515 - 1687551 + T 100 -25.5 -4.68539 | opp_overlap 1687514 1687513 1687511 ACGGCGTAGAAGACG CCAGAGTCTGATTCAAC TGC GTTGAATCAGACTCTGG TTTTATCCTTTTGAT Nham_1486 1688728 - 1687616 - | hypothetical protein TERM 1602 1688114 - 1688100 - G 78 -3.5 -4.99134 | overlap 1688112 ATCGGAAAGTAAAAA CCGTC GCACG AACGG ACGCAGACGGTCCGG Nham_1487 1689327 - 1689007 - | hypothetical protein cysS 1689586 - 1691034 + | cysteinyl-tRNA synthetase Nham_1489 1691337 - 1691837 + | GCN5-related N-acetyltransferase TERM 1603 1692693 - 1692711 + G 84 -17.4 -2.75064 | opp_overlap 1692685, overlap 1692690 ACAATATGTTGAACC GCGCGCCG AAC CGGCGCGC TCCTTACGTCGGCGA Nham_1490 1691834 - 1693432 + | alpha-isopropylmalate/homocitrate synthase family transferase Nham_1491 1694048 - 1693446 - | hypothetical protein Nham_1492 1694260 - 1696218 + | ABC transporter related Nham_1493 1696345 - 1697091 + | phosphatidylserine decarboxylase TERM 1604 1697701 - 1697716 + G 71 -4.6 -4.42619 | overlap 1697695 1697712 CGCTCCCCAGCCGCC CGCGGT GCTG ACGGCG TTTTATACGCTGTTG TERM 1605 1697881 - 1697891 + G 78 -3.2 -5.0916 | GGTCGTCCTCTCCTT CGGT TCG ATCG TTTTTCTGTTGAGCC Nham_1494 1697210 - 1698088 + | CDP-diacylglycerol--serine O-phosphatidyltransferase Nham_1495 1698392 - 1699165 + | MotA/TolQ/ExbB proton channel Nham_1496 1699303 - 1700133 + | OmpA/MotB TERM 1606 1700950 - 1700977 + G 73 -8.4 -4.0641 | opp_overlap 1700944 GCTCAATCATGGCCT GATCGGCCTCGT CATC ATGGGGCTGGTC TTTCTGTCGGTCACC TERM 1607 1701725 - 1701715 - g 76 -8.2 -4.11371 | opp_overlap 1701714 CAAGAGTCTTGAAAA GCGG CCA CCGC ATATCGTCAAGGGCA TERM 1608 1702000 - 1702018 + G 75 -4.5 -4.8048 | GCTCGGCTGGCAGTT CGACATC ATGGC GACGTCG TTTTTCGTCTCGCGG Nham_1497 1700183 - 1702183 + | K+ potassium transporter Nham_1498 1702260 - 1703369 + | transposase, IS4 Nham_1499 1703745 - 1704080 + | rhodanese-like protein TERM 1609 1704899 - 1704932 + G 72 -3.7 -4.63089 | gap 1, overlap 1704901 CCCCAATCTTCAGGC CGCGGTCGCCTATGGC CTC GCCA-AGCCGGACGAG TTCTTTTTTGCAATG Nham_1500 1704096 - 1705250 + | hypothetical protein Nham_1501 1705265 - 1706380 + | extracellular solute-binding protein Nham_1502 1707383 - 1706451 - | lipid A biosynthesis lauroyl acyltransferase Nham_1503 1708663 - 1707392 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1610 1707614 - 1707581 - G 76 -13.1 -3.42503 | CGTCAATAGCGAGAA CACCGCCTCGACAGC TCCC GCCGCCGAGAGGGTG TGGCCGACCATGGAT Nham_1504 1709902 - 1708697 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1611 1709200 - 1709221 + g 100 -9.4 -5.29846 | opp_overlap 1709167 1709164 AGCCGCTGTGGTGCT CACGCGTC CAGACC GGCGCGTG TTTTTCTTTCAGGTT TERM 1612 1709317 - 1709369 + g 75 -14 -3.03124 | gap 2 GCGCGATGTCGCTTT GACCGGCGGCGATCCGCGCGAGCGCG ATG CGCAC-CGCGTCGA-CGCCGGCGGCC TCTTCGCCCATGAAG Nham_1505 1710368 - 1709895 - | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ Nham_1506 1710660 - 1710379 - | acyl carrier protein Nham_1507 1711180 - 1710899 - | hypothetical protein TERM 1613 1711322 - 1711282 - R 100 -18.2 -4.83615 | opp_overlap 1711284 1711286, overlap 1711283 1711284 1711286 GACGGCGTACAAAAA TTCAGGGCACCGCCGGCC TCGCC GTCCGGCGGTGCCCTGTT CGATCCACATGCGGG TERM 1614 1711321 - 1711283 - R 100 -21.7 -3.49687 | opp_overlap 1711284 1711286, overlap 1711282 1711284 1711286 ACGGCGTACAAAAAT TCAGGGCACCGCCGGCC TCGCC GTCCGGCGGTGCCCTGT TCGATCCACATGCGG TERM 1615 1711320 - 1711284 - R 100 -25.2 -2.6933 | opp_overlap 1711284 1711286, overlap 1711283 1711282 1711286 CGGCGTACAAAAATT CAGGGCACCGCCGGCC TCGCC GTCCGGCGGTGCCCTG TTCGATCCACATGCG TERM 1616 1711284 - 1711320 + r 100 -25.2 -3.06183 | opp_overlap 1711283 1711282 1711284 1711286, overlap 1711286 CGGCGTACAAAAATT CAGGGCACCGCCGGCC TCGCC GTCCGGCGGTGCCCTG TTCGATCCACATGCG TERM 1617 1711318 - 1711286 - R 100 -22 -2.88667 | opp_overlap 1711286 1711284, overlap 1711284 1711283 1711282 GCGTACAAAAATTCA GGGCACCGCCGGCC TCGCC GTCCGGCGGTGCCC TGTTCGATCCACATG TERM 1618 1711286 - 1711318 + r 100 -22 -3.08996 | opp_overlap 1711284 1711283 1711282 1711286, overlap 1711284 GCGTACAAAAATTCA GGGCACCGCCGGCC TCGCC GTCCGGCGGTGCCC TGTTCGATCCACATG Nham_1508 1713126 - 1711372 - | hypothetical protein TERM 1619 1713424 - 1713379 - R 75 -5.2 -4.58395 | gap 1, opp_overlap 1713411 1713414 GGTAGCGTCGAAAAA GCCAGGGGACCGGAGCCGCCG TGATG CCGCGGCCGGGATCGCC-GGC GACCGCATCGGCCGT Nham_1509 1716879 - 1713733 - | acriflavin resistance protein TERM 1620 1714978 - 1715022 + g 70 -10.6 -3.57462 | gap 1, opp_overlap 1714939 1714940, overlap 1714942 1714939 1714973 GAGCCTGGGTCGCAG CCGCGCGATGATCTGCTGCGC CGAT GCGTCGC-GCTCCTCGCGTGG TTTCAGCGTGACATA TERM 1621 1715301 - 1715275 - G 72 -2.1 -4.72986 | overlap 1715284 GAGGGTCAGGAAAAA CACCAGAAGCG TGGTC CGCCGCCAGCG CAGGACCAGATCGAG TERM 1622 1715927 - 1715955 + g 93 -14 -4.10657 | gap 1 CTGATGATCTTGATC TTGATCGCGGGCG GGAT CGCC-GCGATCAA TTTTGGCAGCTCTGC Nham_1510 1718068 - 1716881 - | secretion protein HlyD TERM 1623 1717378 - 1717405 + g 80 -14.2 -3.1247 | gap 1, opp_overlap 1717393 1717396 GCGGCAGTTGCTCTT CCGG-CGCGGTGA AAA TCACCGCGATCGG TTCGATCTGCGCGAT TERM 1624 1718014 - 1717984 - G 74 -11.9 -3.53012 | gap 1, overlap 1717985 CGCTGTGCTGCCAAA GCGCGTAACCGCCC GCAA GGGCGATCAC-CGC GACGAGGGATGCCCA Nham_1511 1718181 - 1718660 + | MarR family transcriptional regulator Nham_1512 1718789 - 1719028 + | hypothetical protein TERM 1625 1719535 - 1719590 + G 77 -12.5 -3.57144 | gap 3 ATGTCCGGGCGCGCA CGGCATTGCGCCGCGCCGCGCGCCGCGC TCA GC-CGGCGCAGGTCGCG-C-CGGTGCCG TTTCCCAATGCCGGC Nham_1513 1719291 - 1721870 + | TonB-dependent receptor TERM 1626 1722113 - 1722134 + G 76 -5.7 -4.57837 | overlap 1722125 1722127 AATCCGCGGTTCATC TCGGCTGCG ATCC CGCTGCAGA TTTTTCCGCCGCTGT TERM 1627 1722394 - 1722420 + G 91 -6.4 -5.28176 | overlap 1722386 GCATCTGGTAACGCC GGTGACGCGCGG CAC CCGCGTAGCATC TTTTTTCTGGCTCCA Nham_1514 1721900 - 1722589 + | putative hydroxylase Nham_1515 1722598 - 1723611 + | MotA/TolQ/ExbB proton channel Nham_1516 1723615 - 1724085 + | biopolymer transport protein ExbD/TolR Nham_1517 1724089 - 1724883 + | TonB-like Nham_1518 1725354 - 1724941 - | hypothetical protein Nham_1519 1726120 - 1725416 - | peptidase M50 Nham_1520 1727185 - 1726244 - | transcription factor jumonji/aspartyl beta-hydroxylase Nham_1521 1728405 - 1727182 - | hypothetical protein TERM 1628 1727264 - 1727220 - G 71 -10.8 -3.41745 | gap 2, overlap 1727221 TGCGGATAACATGAA CGG-CGCGGTGCA-CGGCTA CGCGCGC TAGCCGGCGCAGCGCGACCG CCGCCCTTGCAAGTG TERM 1629 1728695 - 1728641 - H 93 -11.7 -4.2558 | gap 2, opp_overlap 1728647 1728647 1728647, overlap 1728642 CATGCTTGATCAAAA GGTTAAGGC--CAGAGTCTGATTCAAC GCA GTTGAATCAGACTCTGGAGCCTTTTCG CTTCTGATGGAATCA TERM 1630 1728694 - 1728642 - H 85 -15.2 -3.15027 | gap 2, opp_overlap 1728647 1728647 1728647, overlap 1728641 ATGCTTGATCAAAAG GTTAAGGC--CAGAGTCTGATTCAAC GCA GTTGAATCAGACTCTGGAGCCTTTTC GCTTCTGATGGAATC TERM 1631 1728647 - 1728687 + H 95 -18.5 -2.50778 | opp_overlap 1728642 1728641, overlap 1728647 1728647 TGATCAAAAGGTTAA GGCCAGAGTCTGATTCAAC GCA GTTGAATCAGACTCTGGAG CCTTTTCGCTTCTGA TERM 1632 1728647 - 1728688 + H 100 -18.3 -3.19168 | gap 1, opp_overlap 1728642 1728641, overlap 1728647 1728647 TGATCAAAAGGTTAA G-GCCAGAGTCTGATTCAAC GCA GTTGAATCAGACTCTGGAGC CTTTTCGCTTCTGAT TERM 1633 1728647 - 1728689 + H 100 -18.1 -4.33151 | gap 2, opp_overlap 1728642 1728641, overlap 1728647 1728647 TGATCAAAAGGTTAA GGC--CAGAGTCTGATTCAAC GCA GTTGAATCAGACTCTGGAGCC TTTTCGCTTCTGATG Nham_1522 1729077 - 1729364 + | hypothetical protein Nham_1523 1729802 - 1729563 - | hypothetical protein TERM 1634 1729764 - 1729790 + g 72 -2.1 -4.68593 | opp_overlap 1729769 1729771, overlap 1729766 AATGGTCCCGGCCTT CAGAACACGGC TCCGC GCCGTCATCCG TTTTTCAGTCATCCG TERM 1635 1729882 - 1729843 - H 100 -15.9 -3.91716 | gap 1, opp_overlap 1729846, overlap 1729846 CGACCCTCGAAACAA CAACGTCACCCGAGCG GAATATGAT CGC-CGGGTGACGTTG TGCATAGACTGGGCA TERM 1636 1729879 - 1729846 - H 86 -11.8 -4.08557 | gap 1, opp_overlap 1729846, overlap 1729843 CCCTCGAAACAACAA CGTCACCCGAGCG GAATATGAT CGC-CGGGTGACG TTGTGCATAGACTGG TERM 1637 1729846 - 1729879 + H 79 -12.5 -3.36327 | gap 1, opp_overlap 1729843 1729846 CCCTCGAAACAACAA CGTCACCCGAGCGG AATATGA TCGC-CGGGTGACG TTGTGCATAGACTGG Nham_1524 1730402 - 1730860 + | hypothetical protein secE 1731848 - 1732039 + | preprotein translocase subunit SecE nusG 1732072 - 1732602 + | transcription antitermination protein NusG TERM 1638 1732696 - 1732665 - f 73 -10.9 -3.3517 | gap 1, overlap 1732663 ATTGACCAGACAAGA CGTGGATGGCCGGG ACCAG CCCGGCCATG-ACG TGTGGAGAGAAATCT TERM 1639 1732988 - 1732964 - g 74 -2.1 -4.81852 | gap 1, overlap 1732967 GCAGAAGGAAGAAAA GAACACC-CC TATCCC GGTGGTGATC ACGATCTATGCCGAT rplK 1732812 - 1733240 + | 50S ribosomal protein L11 rplA 1733247 - 1733939 + | 50S ribosomal protein L1 TERM 1640 1734002 - 1733962 - f 77 -10.4 -3.88559 | opp_overlap 1733969, overlap 1733966 1733968 1733969 AATCACTGCGACAAA CGAAGATGGCGGGATCGG GATGT CCGATCCCGCCTTTTTTA GTTGTCCGGAGGCGA TERM 1641 1733998 - 1733966 - f 83 -13.4 -3.60798 | opp_overlap 1733969, overlap 1733962 1733968 1733969 ACTGCGACAAACGAA GATGGCGGGATCGG GATGT CCGATCCCGCCTTT TTTAGTTGTCCGGAG TERM 1642 1733996 - 1733968 - f 89 -16 -3.37915 | opp_overlap 1733969, overlap 1733966 1733962 1733969 TGCGACAAACGAAGA TGGCGGGATCGG GATGT CCGATCCCGCCT TTTTTAGTTGTCCGG TERM 1643 1733995 - 1733969 - f 95 -19.5 -2.62267 | opp_overlap 1733969, overlap 1733968 1733966 1733962 GCGACAAACGAAGAT GGCGGGATCGG GATGT CCGATCCCGCC TTTTTTAGTTGTCCG TERM 1644 1733969 - 1733995 + F 100 -20.2 -5.32944 | opp_overlap 1733969 1733968 1733966 1733962 GCGACAAACGAAGAT GGCGGGATCGGG ATG TCCGATCCCGCC TTTTTTAGTTGTCCG TERM 1645 1734166 - 1734195 + F 76 -12.9 -3.10464 | opp_overlap 1734158, overlap 1734168 1734170 1734182 CTAAACACCGGGCTC CAGATGTGCTGGC GGTT GCTGGCACGTCTG TGTTCGCATTCCTGA rplJ 1734660 - 1735178 + | 50S ribosomal protein L10 rplL 1735233 - 1735607 + | 50S ribosomal protein L7/L12 TERM 1646 1735588 - 1735634 + F 73 -2.8 -4.71828 | overlap 1735625 TCGAGAAGGCTGGCG CCAAGGTTGAGCTCAAGTAACC GCA GGTGACGTGAGCGAAATCCGGG TTTTCTTCGTCAGGT TERM 1647 1735723 - 1735693 - f 100 -22.7 -3.09327 | TCACCTCACCGAAGA CGTCATGGCCGGG TCGAG CCCGGCCATGACG GAGATGATGAGGGTG TERM 1648 1735970 - 1736005 + F 74 -7.4 -4.3208 | overlap 1735973 GCTTGGAGATGATTT TGACGGGCTGGGCGCA TTCA TGCACCCCGCGCGTTG TTTTGCGTTCTGCGA TERM 1649 1735973 - 1736002 + F 81 -9.1 -4.27465 | overlap 1735970 TGGAGATGATTTTGA CGGGCTGGGCGCA TTCA TGCACCCCGCGCG TTGTTTTGCGTTCTG TERM 1650 1737972 - 1737950 - g 72 -7.7 -4.15044 | GCGCGCGTCAACAAA TACGGCTTC GTCGA GACGCCGTA TCGCAAGGTGAAGGA rpoB 1736159 - 1740301 + | DNA-directed RNA polymerase subunit beta TERM 1651 1740322 - 1740302 - f 73 -12.5 -2.71144 | GAGGCGGCCGAATGA TGCGCGGCC TCC GGCTGCGCA TCGGCGAATAGGGAA TERM 1652 1741373 - 1741359 - g 74 -12.8 -3.28712 | opp_overlap 1741367, overlap 1741336 TGCGCTGTTCGACAA CGGCCG CCG CGGCCG CGTCATCACCGGCGC TERM 1653 1742773 - 1742745 - g 80 -16.7 -2.57013 | overlap 1742741 CTTCAACTCAACTCA CGGCGCCCGCAAG GGT CTCGCGGACACCG CGTTGAAGACCGCAA Nham_1532 1740427 - 1744626 + | DNA-directed RNA polymerase subunit beta' TERM 1654 1744670 - 1744651 - f 100 -12.1 -4.46926 | opp_overlap 1744651 GATTTTACGAGAAAA GGGCCGG TGCAAG CCGGCCC TTTTCGCGTTGCGCG TERM 1655 1744651 - 1744670 + F 93 -12.8 -4.19238 | opp_overlap 1744651 GATTTTACGAGAAAA GGGCCGGT GCAA GCCGGCCC TTTTCGCGTTGCGCG TERM 1656 1744688 - 1744698 + F 90 -8.2 -5.00884 | overlap 1744675 TTCGCGTTGCGCGGC GCCC GGC GGGC TTTTTTCGGCGAGGT TERM 1657 1744840 - 1744801 - f 81 -4.2 -5.0538 | overlap 1744806 1744817 TGGCAGGCCAAAAAA TTAAACCATGGAGCAAGC TGAC GCCTCCTCCATGGAGTAG ACTTCGCTGGGGTCT TERM 1658 1744835 - 1744806 - f 100 -12.9 -4.42765 | overlap 1744801 1744817 GGCCAAAAAATTAAA CCATGGAGCAAGC TGAC GCCTCCTCCATGG AGTAGACTTCGCTGG Nham_1533 1744927 - 1746975 + | amine oxidase TERM 1659 1747074 - 1747088 + F 81 -12.8 -3.56643 | TCGTGTTTCACCCCG CGGCCG GTC CGGCCG TTTCGCAACTGTAAG TERM 1660 1747671 - 1747681 + G 86 -6.8 -5.00616 | opp_overlap 1747660 ATCACGTGCAGGATC TGCC GTC GGCA TTTTTTGCGCGCACC Nham_1534 1747112 - 1749118 + | ABC transporter related Nham_1535 1750467 - 1749271 - | monooxygenase, FAD-binding TERM 1661 1750072 - 1750092 + g 71 -12.5 -3.10715 | GATCGTCCCGCCATC CGCCAGCAC CAG GCGCTGGCG TTCACTGCTGGTGGC Nham_1536 1750642 - 1751778 + | hypothetical protein TERM 1662 1751996 - 1752027 + G 83 -15.9 -3.20164 | opp_overlap 1751990 1751989 CGATCAAACTGTCAC TGGGCCGCGTGCT GTACGA ACCACGCGGCCCA TTCGATTACGTGTAC Nham_1537 1751902 - 1752612 + | hypothetical protein Nham_1538 1752703 - 1752939 + | hypothetical protein Nham_1539 1753893 - 1753045 - | hypothetical protein TERM 1663 1753160 - 1753173 + g 73 -8.1 -3.96932 | GTTTGGACACGATGC GTCCG CAGT CGGAC TTTCTCGCTCTCTAT TERM 1664 1753568 - 1753609 + g 100 -15.3 -5.45802 | gap 1, opp_overlap 1753597, overlap 1753569 AGGAGCCTTCGCCAG ACTGGAGCCCCGCTTCTGAT CGA ATCA-AAGCCGGGCTCCAGC TTTTTGTTTTGACGC TERM 1665 1753569 - 1753608 + g 100 -18.8 -3.86397 | gap 1, opp_overlap 1753597, overlap 1753568 GGAGCCTTCGCCAGA CTGGAGCCCCGCTTCTGAT CGA ATCA-AAGCCGGGCTCCAG CTTTTTGTTTTGACG TERM 1666 1753716 - 1753678 - G 76 -9.4 -4.07568 | TGCTTCGCTCGAAAA CGCCATAGGGCGCGGA TACCGAT TCGGCGCCCAGCGGCG GAGGCGGTCCGGGGC TERM 1667 1754480 - 1754457 - g 72 -3.7 -4.58283 | overlap 1754459 GAAGTCGCGCAAAAA GGTGCCTGC GTTGCA GCAGTCGCC GCAAAAGCGCGGCGT rpsL 1754398 - 1754769 + | 30S ribosomal protein S12 Nham_1541 1754785 - 1755255 + | 30S ribosomal protein S7 TERM 1668 1756799 - 1756779 - g 73 -6.7 -4.34488 | overlap 1756781 TACACCCACAAGAAA CAGACCGGC GGC ACCGGCCAG TTCGCGGCGGTGACG Nham_1542 1755288 - 1757360 + | elongation factor G TERM 1669 1758356 - 1758371 + G 74 -5.4 -4.57569 | gap 1, overlap 1758354 GACCAAGGAGGAGGG CGGTCGT CAC ACG-CCG TTTTTCACCAACTAC Nham_1543 1757400 - 1758590 + | elongation factor Tu rpsJ 1758694 - 1759002 + | 30S ribosomal protein S10 TERM 1670 1759395 - 1759421 + G 80 -14.4 -3.20382 | opp_overlap 1759394 1759393 1759397, overlap 1759379 1759378 GTCGGCGCGGAAATT CAGGCCGACCAT TTC GTGGTCGGCCAG TTCGTCGATGTCACC TERM 1671 1759419 - 1759397 - g 74 -14.9 -2.64155 | opp_overlap 1759379 1759378 1759395, overlap 1759394 1759393 CGGCGCGGAAATTCA GGCCGACCA TTTCG TGGTCGGCC AGTTCGTCGATGTCA rplC 1759104 - 1759829 + | 50S ribosomal protein L3 rplD 1759831 - 1760451 + | 50S ribosomal protein L4 rplW 1760448 - 1760744 + | 50S ribosomal protein L23 rplB 1760773 - 1761606 + | 50S ribosomal protein L2 rpsS 1761622 - 1761900 + | 30S ribosomal protein S19 rplV 1761911 - 1762297 + | 50S ribosomal protein L22 rpsC 1762317 - 1763012 + | 30S ribosomal protein S3 rplP 1763040 - 1763453 + | 50S ribosomal protein L16 Nham_1553 1763459 - 1763665 + | 50S ribosomal protein L29 rpsQ 1763676 - 1763924 + | 30S ribosomal protein S17 TERM 1672 1764054 - 1764032 - g 70 -12 -3.15544 | TGTCATGTGCATCAA GGTGCTTGGA GGC TCCAAGCGCC GCTATGCAACGGTGG rplN 1763964 - 1764332 + | 50S ribosomal protein L14 rplX 1764332 - 1764646 + | 50S ribosomal protein L24 TERM 1673 1764815 - 1764803 - g 74 -4.7 -4.64598 | opp_overlap 1764813, overlap 1764804 GAACGACCGCAAAAA GGCCG AGA CGGCG GCTGGGGATCTGTCG rplE 1764639 - 1765196 + | 50S ribosomal protein L5 rpsN 1765240 - 1765545 + | 30S ribosomal protein S14 rpsH 1765559 - 1765957 + | 30S ribosomal protein S8 TERM 1674 1766023 - 1766065 + F 71 -10.7 -3.53811 | gap 2, opp_overlap 1766022 1766019, overlap 1766032 ACCATTATTAAGGAC GCGTTTTCTGCGGCGAACCGC TTT GCACTTCGCCG--GAAAACGC TTTGGAAGGAATAAG rplF 1766083 - 1766616 + | 50S ribosomal protein L6 rplR 1766628 - 1766990 + | 50S ribosomal protein L18 rpsE 1767062 - 1767634 + | 30S ribosomal protein S5 rpmD 1767714 - 1767908 + | 50S ribosomal protein L30 rplO 1768023 - 1768508 + | 50S ribosomal protein L15 TERM 1675 1769346 - 1769357 + G 70 -7.2 -4.07455 | CTGATCATGGTCGTG GGCG TCAT CGCC TTTATCGTGTTCATG secY 1768659 - 1769990 + | preprotein translocase subunit SecY TERM 1676 1770116 - 1770080 - f 100 -4.6 -5.79595 | gap 2, opp_overlap 1770080, overlap 1770081 1770082 CGTCAAAATAAAAAA CTGGAGCCCGGCTTTGAT TCC ATCAAAGCCGGAAT--AG CTCTGGAGCGCCTAC adk 1770413 - 1771039 + | adenylate kinase TERM 1677 1771097 - 1771081 - f 79 -5.7 -4.72272 | overlap 1771082 GCGTGCGATCAAAAA GCCCGCC AGG GTCGAGC GTGCCCGGACGGGGG TERM 1678 1771242 - 1771282 + F 72 -6 -4.33258 | gap 1, overlap 1771244 GTCGGATGGTTTTCA GACGATGCCGGGCCC-CAG ATGA CAGAGGGTCGGGCGTCGTG TTTGTGTTTGAGGAT rpsM 1771360 - 1771728 + | 30S ribosomal protein S13 Nham_1568 1771857 - 1772249 + | 30S ribosomal protein S11 Nham_1569 1772356 - 1773375 + | DNA-directed RNA polymerase subunit alpha rplQ 1773575 - 1773991 + | 50S ribosomal protein L17 TERM 1679 1774020 - 1774038 + F 100 -12.4 -5.45652 | opp_overlap 1774019 1774020 TCGGGACATTAGAAG CGGCGCTC TCC GAGTGCCG TTTTTTGTTGCACGT Nham_1572 1775221 - 1776627 + | peptidase S1C, Do TERM 1680 1777190 - 1777170 - g 91 -9.7 -4.65895 | GCGGCGATCGAAAAA CTGTTCGTC CGC GCCGAACAG GTCGAGGGCAAGCCG Nham_1573 1776624 - 1777964 + | recombination factor protein RarA Nham_1574 1777967 - 1778659 + | hypothetical protein TERM 1681 1779814 - 1779801 - g 72 -3.7 -4.56133 | CTTCAATAAGGAAAA CTGGC AATT GCCGG GCGGTCTTCAGAAGC Nham_1575 1778752 - 1779987 + | pseudouridine synthase, RluD Nham_1576 1780053 - 1780835 + | ATP12 ATPase TERM 1682 1781284 - 1781266 - g 70 -7.3 -4.07568 | opp_overlap 1781276 1781278 GCCTCGCCCTCAAAA CCCGCGC TGACC GCGCTGG AAGCGCTATTCGTAT TERM 1683 1781479 - 1781494 + G 74 -2.4 -4.83169 | overlap 1781480 1781481 GACATCAAGATCGCG TTCCGG AATT CCGGGC TTTTTCTCGAGGCAT Nham_1577 1780885 - 1782582 + | hypothetical protein TERM 1684 1782817 - 1782863 + G 76 -13.7 -3.15579 | gap 1 CCGAGGTGCTGGTGT TCG-TGCTGCGGCTGTCGGGGC GGGC GCCCTGAGAGCCGCACCGCCGG TTGATGACAGCTTCA Nham_1578 1782579 - 1782848 + | type III secretion protein TERM 1685 1783048 - 1782991 - g 77 -12.5 -3.65693 | overlap 1782992 1783020 1783037 AGGACATACTCGAAA CCCTCGACGCGCGGCGCGCCGCCGC AAAACTCG GCGGTGGCGAGAAGCGCATCGAGAC GCAGCACGCGCGAGG TERM 1686 1783047 - 1782992 - g 81 -16 -2.78934 | overlap 1782991 1783020 1783037 GGACATACTCGAAAC CCTCGACGCGCGGCGCGCCGCCGC AAAACTCG GCGGTGGCGAGAAGCGCATCGAGA CGCAGCACGCGCGAG Nham_1579 1782933 - 1784504 + | carboxyl transferase Nham_1580 1784612 - 1784956 + | alkylhydroperoxidase AhpD core TERM 1687 1784999 - 1784962 - f 74 -6.9 -4.2679 | gap 1, overlap 1784963 1784966 GAAGGCGTAGCAAAA GGCAGCGCCGCCGAGCGC GGC ACCATCGACGACG-TGCC ACATGGACTACTTGC Nham_1581 1785195 - 1786661 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Nham_1582 1787146 - 1786658 - | SmpA/OmlA TERM 1688 1787341 - 1787358 + G 71 -5.5 -4.386 | GGCATGATCGTGGCG CAAGCGC GAGA GCCCTTG TTTTATCGGGCCTTA TERM 1689 1787700 - 1787683 - g 78 -4.8 -4.70659 | gap 1, overlap 1787684 1787685 CGGGACATCGAAAAA GCGCGGC GACTT GCCGC-C TATACCGCGGACGCG Nham_1583 1787254 - 1787793 + | ubiquinol-cytochrome C chaperone TERM 1690 1787928 - 1787944 + G 70 -10.1 -3.53811 | overlap 1787942 GCCGCGCGCGTGGCG CTGGCGA AGA TCGCCGG TTTGCGCGCCATCGA Nham_1584 1787790 - 1788401 + | hypothetical protein TERM 1691 1789168 - 1789184 + G 75 -4.4 -4.70169 | gap 1, overlap 1789170 GCTGGCGATCATGGG CA-GCGC CATG GCGCGTG TTTTGTTCGGTCTAG TERM 1692 1789275 - 1789260 - g 74 -10.4 -3.72695 | opp_overlap 1789259 AGGGCGGGGAGGAAA TCCGCG AAGC CGCGGA ATTGCTGCGGGCGAT Nham_1585 1788674 - 1789738 + | putative glycerol-3-phosphate acyltransferase PlsX Nham_1586 1789735 - 1790712 + | 3-oxoacyl-(acyl carrier protein) synthase III Nham_1587 1790844 - 1791176 + | integration host factor, alpha subunit Nham_1588 1791322 - 1791909 + | MerR family transcriptional regulator TERM 1693 1792509 - 1792486 - f 83 -8.2 -4.63928 | gap 1 AGATCACCGGAAAAA CCATG-CGACG ATC CGTCATCATGG CGCTGCTCGTTGGCT Nham_1589 1792754 - 1793350 + | hypothetical protein Nham_1590 1794760 - 1794323 - | hypothetical protein TERM 1694 1794671 - 1794661 - G 73 -6.8 -4.24948 | CGAGGATATCGAAAA GCTG TGC CAGC GCTGGTTCTTGCACT TERM 1695 1794999 - 1794977 - R 76 -12.7 -3.136 | overlap 1794975 TCAATAGGTAAGAGA CCCGACGCC GTGAA AGCGTCGGG CAAGTTTGGAAGCGG TERM 1696 1795115 - 1795126 + r 79 -7.2 -4.564 | opp_overlap 1795114 GCTCCATCCACAAGC GGGG CGCG CCCC TTTTCATTTGGCATT Nham_1591 1795637 - 1795161 - | nuclease (SNase-like) Nham_1592 1795829 - 1796359 + | hypothetical protein TERM 1697 1796741 - 1796699 - T 83 -13.5 -3.3506 | overlap 1796705 GCTAAATCCGCATAA GACGAAGCCGCCGAGCG GAATATGAT CGGTCGACGACTTCGTC AAGGTGGACCCGGAC Nham_1593 1797292 - 1796939 - | hypothetical protein TERM 1698 1797438 - 1797452 + r 76 -3.5 -4.89477 | gap 1, overlap 1797439 CGTCCTTCGACCATT C-GCGG TGAA CCGCTG TTTTCTTCTTGGGAA Nham_1594 1798175 - 1797837 - | transposase Nham_1595 1798591 - 1798223 - | IS5 family transposase OrfA Nham_1596 1799561 - 1798668 - | hypothetical protein Nham_1597 1799826 - 1799578 - | hypothetical protein Nham_1598 1800547 - 1799864 - | hypothetical protein Nham_1600 1801042 - 1801335 + | hypothetical protein Nham_1601 1801792 - 1801499 - | hypothetical protein TERM 1699 1801545 - 1801596 + g 76 -7.8 -4.3586 | CCACTGGCCTTACGC TTGCGCGGCTGTCTTTGCTCGCCG ACCT CGGCGAACGGGTTTGGCAGCGCAA TTTTCATATCGATCA Nham_1602 1802041 - 1801793 - | hypothetical protein Nham_1603 1802147 - 1802503 + | hypothetical protein Nham_1604 1803092 - 1802688 - | hypothetical protein TERM 1700 1803224 - 1803267 + r 70 -4.6 -4.5394 | overlap 1803225 1803229 1803259 AATAATTACAATTTT TTATCCGTCGCTATCCGTCA AGAG TAACGGATGGTGAGGTATAG TTTTACTGTTTCTCT TERM 1701 1803369 - 1803345 - R 78 -9.3 -4.05529 | opp_overlap 1803345 1803344 ACAAGCACCAAATAA TTCGAGGCCTT ACC AAGACCACGAA ATTCTGGAAACGGGG Nham_1606 1807402 - 1805354 - | hypothetical protein TERM 1702 1807328 - 1807355 + g 76 -12.6 -3.53224 | CTTGGCGAGATCGTC GACCGCGCGCGA GGCA TCGCTCGCGGCC TTTACGGCACCACTG Nham_1607 1808305 - 1807409 - | Mu-like prophage major head subunit gpT TERM 1703 1807925 - 1807937 + g 72 -2.6 -4.72272 | ACCGTCATAGCATTG CGTC GCGAA GGCG TTTTTGATCAGCGCG Nham_1608 1809288 - 1808302 - | Mu-like prophage I protein Nham_1609 1809653 - 1809288 - | hypothetical protein TERM 1704 1809706 - 1809669 - R 81 -12.8 -3.53761 | GAAGGCGGTTGTAAA GCTGACAACTCTCAGG GGACAA CCTGACAGGTGTCAGC CGGAGGCCTCAGCGT TERM 1705 1809906 - 1809868 - R 71 -10.3 -3.55444 | gap 1, overlap 1809869 1809888 GCTTGATGTCTCAAA CTACCGGGCCGCT-ACGC AAAC GCACCAGCGGCCCGCTAA TCGCGTTTTGGAGAG Nham_1610 1810300 - 1809929 - | hypothetical protein Nham_1611 1810679 - 1810335 - | hypothetical protein Nham_1612 1811395 - 1810676 - | hypothetical protein Nham_1613 1813401 - 1811398 - | hypothetical protein TERM 1706 1812104 - 1812124 + g 88 -6.7 -5.1356 | GGGAATGCCTTGGTT GGCCGGCCG ACG CGTTCGGTC TTTTTGTTCATGCGA Nham_1614 1813619 - 1813398 - | hypothetical protein Nham_1615 1813673 - 1814197 + | hypothetical protein TERM 1707 1815603 - 1815619 + G 71 -10.9 -3.51329 | CCGGCAGAATTCGGG TCTGCTC GCC GAGCAGA TTCTGGTTGGCAGTC recA 1814587 - 1815675 + | recombinase A TERM 1708 1815679 - 1815709 + T 71 -11.2 -3.30635 | opp_overlap 1815697, overlap 1815669 1815680 GCGGAGGACTGACCC TTTCCGCTTCCGAT GGA ATCAGAAGCGGGAG TTCTCGAGCCCTTTC TERM 1709 1815680 - 1815708 + T 71 -12.5 -2.5806 | opp_overlap 1815697, overlap 1815679 1815669 CGGAGGACTGACCCT TTCCGCTTCCGAT GGA ATCAGAAGCGGGA GTTCTCGAGCCCTTT Nham_1617 1816028 - 1815738 - | hypothetical protein TERM 1710 1815956 - 1815999 + g 100 -15.3 -5.04249 | opp_overlap 1815955, overlap 1815957 GCCTTTCGGAAGCAG GCGGGCGCTGTGGATGTTG AGTTGC CGACATCCCCAGCGTCCGG TTTGTTTTTTGGCCA TERM 1711 1815957 - 1815998 + g 100 -18.8 -3.61465 | opp_overlap 1815955, overlap 1815956 CCTTTCGGAAGCAGG CGGGCGCTGTGGATGTTG AGTTGC CGACATCCCCAGCGTCCG GTTTGTTTTTTGGCC Nham_1618 1819090 - 1816214 - | glycine dehydrogenase TERM 1712 1818936 - 1818968 + g 72 -14.1 -2.79098 | gap 1, overlap 1818931 1818952 1818953 TGGCCGAGATCGAGC GGCGCCGCCTGCCG GATCGA CGGC-GGCAGCGCC TCGTTCATCAATGCC Nham_1619 1819529 - 1819164 - | glycine cleavage system protein H Nham_1620 1820702 - 1819539 - | glycine cleavage system aminomethyltransferase T TERM 1713 1819641 - 1819619 - G 78 -4.6 -4.7373 | overlap 1819620 GCACGTCAGCAAAAA CCGTGCCGCC GAT GGCGGCGTGC AATGGCGGCAGATAG TERM 1714 1819854 - 1819882 + g 85 -10.2 -4.36914 | gap 1, opp_overlap 1819835 1819853 1819852 CGCGCCGGGGAAACC GCCGGCACGCGCG CCGC CGC-TGCGCCGGC TTTTCTGCACCGACC TERM 1715 1821764 - 1821744 - g 73 -6.7 -4.3898 | overlap 1821745 ATCACGGCGACAAAA TTCCCGGCG GGC CTCCGGGAT CGCCGGACGAGGATG alaS 1821179 - 1823872 + | alanyl-tRNA synthetase Nham_1622 1824302 - 1823904 - | hypothetical protein TERM 1716 1824335 - 1824295 - G 71 -11.1 -3.49475 | opp_overlap 1824302 1824304, overlap 1824299 1824304 CCGATGGTGACATAA GCGATCATAGCGTCCTCCG TTT CGGAGGAAGCTATGCTGTC GATTGGAACATATCA TERM 1717 1824331 - 1824299 - G 74 -14.9 -2.63079 | opp_overlap 1824302 1824304, overlap 1824295 1824304 TGGTGACATAAGCGA TCATAGCGTCCTCCG TTT CGGAGGAAGCTATGC TGTCGATTGGAACAT TERM 1718 1824302 - 1824328 + r 81 -15.2 -2.66733 | opp_overlap 1824299 1824295 1824304, overlap 1824304 TGACATAAGCGATCA TAGCGTCCTCCG TTT CGGAGGAAGCTA TGCTGTCGATTGGAA TERM 1719 1824304 - 1824326 + r 77 -13.4 -2.87522 | opp_overlap 1824299 1824295 1824304, overlap 1824302 ACATAAGCGATCATA GCGTCCTCCG TTT CGGAGGAAGC TATGCTGTCGATTGG TERM 1720 1824326 - 1824304 - R 76 -13.4 -2.84173 | opp_overlap 1824304 1824302, overlap 1824299 1824295 ACATAAGCGATCATA GCGTCCTCCG TTT CGGAGGAAGC TATGCTGTCGATTGG Nham_1623 1825589 - 1824372 - | isocitrate dehydrogenase Nham_1624 1825902 - 1827134 + | RNA methyltransferase TrmH, group 1 TERM 1721 1827321 - 1827298 - f 78 -8.8 -4.10657 | gap 1, opp_overlap 1827299 TCATAGCTCCGAAAA CGGTCCGCGAG ACG CTCGCCG-CCG TTGCGCACCTTTCCG Nham_1625 1827420 - 1827905 + | hypothetical protein TERM 1722 1828375 - 1828408 + G 71 -10.9 -3.43654 | gap 1, opp_overlap 1828356 GCCCGGGTGTTCCCG GACCG-GCGCGACCCG ACG CGGGTCGTGCACAGCC TTGTCGATATGTTTC Nham_1626 1828210 - 1829553 + | transposase, IS4 Nham_1627 1829776 - 1830870 + | tISRso5; ISRSO5-transposase protein Nham_1628 1830924 - 1832018 + | tISRso5; ISRSO5-transposase protein Nham_1629 1832735 - 1832001 - | hypothetical protein Nham_1630 1833674 - 1832805 - | hypothetical protein Nham_1631 1833835 - 1834323 + | cyanate hydratase Nham_1632 1834884 - 1834489 - | hypothetical protein TERM 1723 1835886 - 1835873 - g 79 -8.1 -4.2803 | overlap 1835874 CATTCTAATGGAAAA CGAGC GGCC GCTCG GCGCCGGTCCGGTGC Nham_1633 1835148 - 1835915 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Nham_1634 1836045 - 1836287 + | phosphoribosylformylglycinamidine synthase subunit PurS Nham_1635 1836300 - 1837001 + | phosphoribosylformylglycinamidine synthase I TERM 1724 1838776 - 1838752 - g 76 -5.5 -4.59982 | overlap 1838753 CTACAACGAAACAAA CGGCCGCGGCA TTC TGCCGACGCCC TCGATCGGCGGCGTC TERM 1725 1838982 - 1838963 - g 72 -4.2 -4.56597 | gap 1 CTTGCCGCGGAAAAA CGCAACGGC GAT GTCGT-GCG TGGCATGATCCATGC Nham_1636 1837136 - 1839370 + | phosphoribosylformylglycinamidine synthase II TERM 1726 1839411 - 1839430 + F 76 -13.6 -2.75826 | opp_overlap 1839402, overlap 1839409 AGAAATGCGGTGTCG TCGTCCGC GAAT GCGGACGA TCCTGTATTCCGCTG TERM 1727 1839479 - 1839508 + F 80 -4.9 -4.87626 | overlap 1839481 1839481 AACAGCTATGGGATA CTGGATACTCCGC TTTC GCGGAGTATGACG TTTTTCGTGTTGAGC Nham_1637 1839965 - 1840198 + | BolA-like protein Nham_1638 1840283 - 1841416 + | low temperature requirement A Nham_1639 1842570 - 1841605 - | hypothetical protein TERM 1728 1841690 - 1841632 - G 76 -7.3 -4.27316 | opp_overlap 1841667 1841669, overlap 1841634 CGCGTGAACCGAAAA CATC-GCGTCGGGGTCGGTCCATGACGCC GTC GGCGTC-CAGCCCGAGCCCTTCGCCAACG CGCTGAAGCGGTCGA TERM 1729 1841687 - 1841634 - G 74 -10.1 -3.7398 | gap 1, opp_overlap 1841667 1841669, overlap 1841632 CGTGAACCGAAAACA TCGCGTCGGGGTCGGTCCATGACGCC GTC GGCGTC-CAGCCCGAGCCCTTCGCCA ACGCGCTGAAGCGGT Nham_1640 1843873 - 1842617 - | hypothetical protein TERM 1730 1843165 - 1843201 + g 75 -3.6 -4.93365 | overlap 1843188 1843189 TGACGAGATTGCGTG CGAGCTTCACCG-GCCCT ACG AGGGCGCGGTGC-GCGGG TTTTTCATTGTCGAA TERM 1731 1844230 - 1844240 + G 86 -8.2 -4.56775 | GGCACGCCGCAGTTT CCGC AGT GCGG TTTTTCGGGGCAGGT Nham_1641 1844149 - 1844490 + | glutaredoxin-like protein TERM 1732 1844494 - 1844529 + F 81 -13.2 -3.50853 | GCATCGGCCTGACGA CGGCCGGCCGCGTC ATCGGTCC GGCGCGGCTGGACG TTATCGTTGAGGACA Nham_1643 1845376 - 1845642 + | hypothetical protein TERM 1733 1845682 - 1845665 - T 100 -14.1 -4.7497 | opp_overlap 1845665 TGCAGGCAGTAAAAA GCCCCGG ACAT CCGGGGC TTTTTCTGGGACTGA TERM 1734 1845665 - 1845682 + T 100 -14.1 -4.84359 | opp_overlap 1845665 TGCAGGCAGTAAAAA GCCCCGG ACAT CCGGGGC TTTTTCTGGGACTGA rpsD 1846326 - 1845709 - | 30S ribosomal protein S4 TERM 1735 1846205 - 1846231 + g 81 -15.8 -3.07947 | overlap 1846196 GAGAGCTTGCCCTTG CGGCGCTGGCCA TGC TGGCCGGGGCCG TATTCGCGCTTGTTG TERM 1736 1846526 - 1846496 - R 91 -16.9 -3.53444 | gap 1, opp_overlap 1846495 1846494 1846493, overlap 1846501 CCACGGGTCGCGAAA CGCAACGCGGGCCG AAAC CGGCCCGCGT-GCA GGGGTTTTCTAGGGA TERM 1737 1846522 - 1846501 - R 100 -18.7 -3.27525 | opp_overlap 1846495 1846494 1846493, overlap 1846496 GGTCGCGAAACGCAA CGCGGGCCG AAAC CGGCCCGCG TGCAGGGGTTTTCTA Nham_1645 1847439 - 1846642 - | glutamate racemase TERM 1738 1846685 - 1846669 - G 76 -5.8 -4.56597 | gap 1 CCGGCCGCCGAAAAA CGG-CGC CAGC GCGTCCG TCAGGGTGCGGGAGC TERM 1739 1847068 - 1847107 + g 74 -9.8 -3.80855 | gap 1, overlap 1847090 CGCCTGGGTGTATTC GCGCTGCACGGTCGCCCGG GTA CCGAGC-ACCGAGACGCGC TTGGTTTTTGAGGCC Nham_1646 1848105 - 1847548 - | hypothetical protein TERM 1740 1848024 - 1848058 + g 71 -11.4 -3.41051 | gap 1, overlap 1848053 CCGCGCCAGGTTCGA GCGC-ACGGCGGTCG GGAGCG CGCTCGCCGTCGCGC TTCTCATCCCAATAG TERM 1741 1848458 - 1848480 + H 100 -14.2 -5.38497 | opp_overlap 1848458 CGGACATGGATCAAA GGGAGGGTTT CTC AGACCCTCCC TTTTTTCGTTTCGGT TERM 1742 1848480 - 1848458 - H 81 -12 -3.78022 | opp_overlap 1848458 CGGACATGGATCAAA GGGAGGGTTT CTC AGACCCTCCC TTTTTTCGTTTCGGT Nham_1647 1848702 - 1849187 + | hypothetical protein TERM 1743 1849673 - 1849702 + G 100 -8.5 -5.83211 | gap 1, overlap 1849674 CTGCCCTTCGGCAGC GCTGTAGCGCGCCG CTT CGGCGC-CTTCAGG TTTTTTCTTTTCATG TERM 1744 1849674 - 1849701 + G 83 -12 -4.07486 | gap 1, overlap 1849673 TGCCCTTCGGCAGCG CTGTAGCGCGCCG CTT CGGCGC-CTTCAG GTTTTTTCTTTTCAT TERM 1745 1849801 - 1849852 + G 81 -10 -4.17516 | gap 1, overlap 1849847 1849847 CGGCGCGTCGGCGTC GGTGTCGGGTGCGATGGCGGCGGCG ATC CGCT-TCGCCTTCGTGCGCGGCAGC TTTCTGTCCTTTCGC Nham_1648 1849361 - 1850149 + | rhomboid-like protein TERM 1746 1850339 - 1850311 - f 81 -11.7 -3.68209 | AATACAAAGAATCAA GGGTCACGCAGAA CGA TCCTGCGCGATCC AGCTGTCGGAGGCGA Nham_1649 1850357 - 1850785 + | signal-transduction protein Nham_1650 1851841 - 1850798 - | patatin TERM 1747 1852340 - 1852366 + G 73 -11.4 -3.60661 | overlap 1852356 TGACGACGCCGCCGC CCGCCATCGTGG CTC CCGCGCAGGCGG TTCTGTCATTGACTG Nham_1651 1852069 - 1853115 + | hypothetical protein TERM 1748 1853322 - 1853346 + F 75 -5.5 -4.63542 | opp_overlap 1853319 1853317 1853322, overlap 1853338 1853344 GCGGCAGGAACAGGA GCCACGCGCCC CGT GCGCGGATGGC TTTTTCGGCCTTCTC Nham_1653 1853620 - 1854729 + | transposase, IS4 Nham_1654 1855336 - 1854992 - | hypothetical protein TERM 1749 1855672 - 1855705 + G 91 -2.9 -5.49568 | TCGCGAAATCATCTG GCTCCTGCGGATGGG CGCT CCTGTGCGCTGCGGC TTTTTATTTTGCCTT TERM 1750 1855989 - 1856029 + G 86 -18.3 -2.78816 | CGTTGGCGCGCGCTC GGCCTGGCTACGACGGTGG GGA CCAGCGTCGTAGCCAAGAC TGTGGTCGGCGATCG Nham_1655 1855650 - 1856573 + | hypothetical protein Nham_1656 1857056 - 1856601 - | nitrogen-fixing NifU-like TERM 1751 1856751 - 1856763 + g 95 -10.5 -4.41494 | GGCCCACTTGCCCTG CGGCG GCG CGCCG TTTTCCTTCAGCATC Nham_1657 1857307 - 1858011 + | GTP cyclohydrolase I TERM 1752 1858348 - 1858387 + G 79 -8.6 -4.3739 | gap 2, opp_overlap 1858342 CTGGATCAAGGTCGA GCAGCGAGGCGCCGCCTG CCACAC CGGGCGGCGG-TC-CTGC TTTTATCGGGCGGTG hisI 1858049 - 1858492 + | phosphoribosyl-AMP cyclohydrolase Nham_1659 1858665 - 1859639 + | hypothetical protein Nham_1660 1859867 - 1861327 + | hypothetical protein Nham_1661 1862133 - 1861555 - | CheA signal transduction histidine kinase TERM 1753 1862260 - 1862209 - R 100 -18.4 -4.41494 | gap 1, opp_overlap 1862251 1862252, overlap 1862214 1862252 CATGCTCAATCAAAA GGT-AAGGCTAGATTCTGATTCAAC GCA GTTGAATCAGAATCTAGCCTGGAGC CCGGGCCTTATCCAG TERM 1754 1862254 - 1862214 - R 100 -27.3 -3.41708 | opp_overlap 1862251 1862252, overlap 1862209 1862252 TCAATCAAAAGGTAA GGCTAGATTCTGATTCAAC GCA GTTGAATCAGAATCTAGCC TGGAGCCCGGGCCTT Nham_1662 1862794 - 1862249 - | response regulator receiver domain-containing protein ppnK 1863679 - 1862900 - | inorganic polyphosphate/ATP-NAD kinase Nham_1664 1864039 - 1864242 + | hypothetical protein Nham_1665 1864410 - 1864835 + | hypothetical protein Nham_1666 1865103 - 1865819 + | OmpA-like transmembrane region TERM 1755 1865878 - 1865860 - T 91 -13.1 -4.03078 | opp_overlap 1865860 GGATCACACGACAAA GGCCGGC TTCGC GCCGGCC TTTTCCTTGCAGCGC TERM 1756 1865860 - 1865878 + T 93 -13.1 -4.4078 | opp_overlap 1865860 GGATCACACGACAAA GGCCGGC TTCGC GCCGGCC TTTTCCTTGCAGCGC Nham_1667 1866112 - 1865927 - | hypothetical protein Nham_1668 1866884 - 1866321 - | nitroreductase TERM 1757 1866349 - 1866375 + g 79 -10.8 -3.95073 | opp_overlap 1866340 ACGATATCCGACAAG GCCGGGCGAGGG CGG TCCTTGTTCGGC TTTGTCGGTGTGCCG thrS 1869012 - 1866967 - | threonyl-tRNA synthetase TERM 1758 1867360 - 1867390 + g 71 -9.7 -3.68302 | gap 1, opp_overlap 1867343 CTCCAGCGAGCCGCA GATCGCG-CGGTGG ACCA TCACCGGCGCGACC TTGTTGGAATGTTCG Nham_1670 1869632 - 1869168 - | hypothetical protein TERM 1759 1870004 - 1870055 + G 71 -8.1 -3.85698 | gap 3, opp_overlap 1870004 CCGTCGATGATCAAA CGTCCAGTGCTGGAGGCCGGCGA-CA AGC TGCTCGTCGGCTTCAAGC-C-GGAGG TTTATGAAGAAGAGC Nham_1671 1869731 - 1870096 + | hypothetical protein Nham_1672 1870442 - 1871197 + | ABC transporter related Nham_1673 1871190 - 1871945 + | ABC transporter related TERM 1760 1872073 - 1872029 - f 100 -25.3 -3.73068 | GTGTCAAGTCAAGAA CCTGGAGTCTTTCACCATTTC CAT GAAACGGTGAAAGGCTCCAGG CAGCGTCCCCGGCGG TERM 1761 1872848 - 1872887 + G 70 -7.8 -4.06148 | gap 1 GGCGGCGGAATTCGG CATCGTCAAGGGCGGCCAG AAA CTAGCCGGCC-TGCTGATG TTTCTGTCGGATGTT Nham_1674 1872111 - 1873340 + | ABC transporter substrate-binding protein TERM 1762 1873344 - 1873379 + F 79 -13.3 -3.12402 | gap 1, opp_overlap 1873319 1873315 GTCAAGCATTGACGC TGCGGTCCCCGGCGGT GCTGA GCCGCCGGGGAAC-CA TTACATACTCGTTTC Nham_1675 1873425 - 1874300 + | inner-membrane translocator TERM 1763 1874685 - 1874701 + G 72 -4.3 -4.55209 | overlap 1874682 CGCGATGATTACGCT GGCGTTG GCG CAGCTCC TTTATTTCATCTATC TERM 1764 1874922 - 1874910 - g 71 -4.7 -4.40358 | ATCGATCCGAGAAAA CGAGC AGC GCGCG ATCTCGTTGGGCTAC Nham_1676 1874302 - 1875273 + | inner-membrane translocator Nham_1677 1875417 - 1876073 + | hypothetical protein TERM 1765 1876432 - 1876462 + G 70 -7.5 -4.07885 | gap 1 CGCGTTGATCGGCGG GCTGGTCGGTGGCG GCAT CGCCAA-GGCCGGC TTTTCGGCGGCGGTC Nham_1678 1876088 - 1877092 + | phosphate transporter Nham_1679 1877399 - 1877085 - | small multidrug resistance protein TERM 1766 1879110 - 1879146 + G 70 -12.2 -3.14132 | gap 1, overlap 1879112 CATCGCCGCCAACGG CTCCGGTGTCGCCGACG ACGT CGATGGCGAC-CCGGTG TTCCTGGCCAAGAAC TERM 1767 1879112 - 1879144 + G 76 -13.4 -3.13403 | gap 1, overlap 1879110 TCGCCGCCAACGGCT CCGGTGTCGCCGACG ACGT CGATGGCGAC-CCGG TGTTCCTGGCCAAGA Nham_1680 1877623 - 1879242 + | peptide chain release factor 3 TERM 1768 1879257 - 1879277 + T 95 -14 -4.07568 | opp_overlap 1879257 AGCCCGTAACGAAAA CGGCCGGT GCGCA ACCGGCCG TTTTCCGAGAGGCGC TERM 1769 1879277 - 1879257 - T 100 -14 -4.41047 | opp_overlap 1879257 AGCCCGTAACGAAAA CGGCCGGT GCGCA ACCGGCCG TTTTCCGAGAGGCGC Nham_1681 1879601 - 1879296 - | hypothetical protein TERM 1770 1879338 - 1879348 + g 73 -8.2 -4.07568 | overlap 1879308 GTTGCCGTTGATGTC CGCC GGC GGCG TTTTCGCGGACCCGG TERM 1771 1879416 - 1879437 + g 73 -2.9 -4.8048 | overlap 1879399 1879417 GCCGACCGTGCCGTT CGTCGATCC CTTC GGATGGACC TTTTTGGTATGCGCG Nham_1682 1879772 - 1880356 + | NnrU TERM 1772 1880628 - 1880659 + G 71 -5 -4.4078 | overlap 1880629 1880630 GTGGTGGATATGCCG TTCGGCTCCTACGA GGCC TCGAAGGAGCAGGC TTTTCATTCCGCCGC panB 1880358 - 1881185 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase Nham_1684 1881339 - 1881992 + | hypothetical protein TERM 1773 1882504 - 1882465 - g 74 -9.9 -3.81146 | gap 1, opp_overlap 1882500 CTGCCCAAGGAAGAA CCAGC-ACCGCAGCAGCA GGCCG CGCCGCAGCGGCAGCCGG TGCAACAGTCCGAGC Nham_1685 1882033 - 1882572 + | hypothetical protein engA 1882642 - 1884024 + | GTP-binding protein EngA TERM 1774 1884171 - 1884191 + T 83 -9.6 -4.4078 | opp_overlap 1884149, overlap 1884149 1884173 GCCAGTCCAGCCGGA GTCCGGCG AGCGC CGCCGGCC TTTTCGTTGGACAGC Nham_1687 1885125 - 1884382 - | short-chain dehydrogenase/reductase SDR Nham_1688 1885386 - 1886108 + | orotidine 5'-phosphate decarboxylase Nham_1689 1886769 - 1886170 - | hypothetical protein Nham_1690 1886859 - 1887662 + | ISGsu2, transposase TERM 1775 1887957 - 1888011 + F 75 -9.1 -4.08216 | gap 2 GCGCCGCCAGCTCTG GCCGATGGCGG-GGTAG-CGCTGGCCC CAG GGGCCGGCCTCGAACGCCGCCAGCGCC TTTTCGGCAGCATCG Nham_1692 1888892 - 1889299 + | transposase, IS4 TERM 1776 1889560 - 1889544 - f 70 -3.7 -4.63486 | opp_overlap 1889544 1889539 ACTTTTGGAACAAAA CATAAAC AAT GTTTCTG TTATGTTCTAATAAA TERM 1777 1892152 - 1892140 - g 72 -2.6 -4.68384 | ACGGATTCAATAAAA GCCA TGCCG CGGC CTATGCGCTCGTATC dnaE 1889847 - 1893353 + | DNA polymerase III subunit alpha TERM 1778 1894091 - 1894052 - g 71 -13.6 -2.53228 | gap 1, opp_overlap 1894050, overlap 1894051 1894047 1894043 CAACAAGGAAGACAT CGCGATCCAGGAGGCCCAG CGG CTGAACATCCCGG-TCGCG GCTATCGTCGACACC rpsB 1893534 - 1894532 + | 30S ribosomal protein S2 TERM 1779 1895459 - 1895435 - g 95 -2.7 -5.67063 | TCGACGACAAAAAAA GCGTCGGTCAG GCG CTCAAGGACGC TGAGGGCAAGGTCGG TERM 1780 1895478 - 1895496 + G 83 -13.2 -3.91144 | GGGCAAGGTCGGCGC GCCTGTGA AGC TCACAGGC TTTGTGCGCTATGCG tsf 1894660 - 1895583 + | elongation factor Ts Nham_1696 1895636 - 1896352 + | uridylate kinase Nham_1697 1896393 - 1896977 + | ribosome recycling factor TERM 1781 1897416 - 1897398 - g 70 -10.3 -3.6217 | ACTCACCAGAGACAA CACCAGC CTCAC GCTGGTG GTGGCCTTCAACTAT Nham_1698 1896997 - 1897755 + | undecaprenyl diphosphate synthase TERM 1782 1898075 - 1898094 + G 71 -9.2 -3.76224 | overlap 1898084 TGCGGCGGTCGGCGC GGCGTCGC AACG GCTACGCC TTTGGTCAGTAGCCG TERM 1783 1898522 - 1898544 + G 73 -7 -4.31329 | gap 1, overlap 1898500 1898501 1898522 CCTCGACGGCTTTGT G-GCGGCGA TTGTTC TCGCCGCGC TTTTCGGATTTTTGC Nham_1699 1897761 - 1898603 + | phosphatidate cytidylyltransferase Nham_1700 1898607 - 1899830 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1784 1899839 - 1899821 - f 77 -11.7 -3.56862 | overlap 1899833 ACAAATCGCCGCAAA GGCCACC TAAAG GGTGGCC GGGAACAGGGCCTCC TERM 1785 1900481 - 1900499 + G 70 -12.4 -3.24513 | overlap 1900474 GCGAGACGCTGACAT TCGCCGTG AAA CGCGGCGA TTCGGTTATCGATCT Nham_1701 1899877 - 1901028 + | peptidase M50, putative membrane-associated zinc metallopeptidase Nham_1702 1901343 - 1903874 + | surface antigen (D15) lpxD 1903907 - 1904992 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase Nham_1704 1904996 - 1905451 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 1786 1906083 - 1906104 + G 70 -7.3 -4.07687 | overlap 1906096 GCGTCTCGCCAAGGT CAGGTCC CTCTATCA GGACCTG TTTTACGGGCCGGGT Nham_1705 1905451 - 1906257 + | UDP-N-acetylglucosamine acyltransferase Nham_1706 1906277 - 1907134 + | hypothetical protein TERM 1787 1907694 - 1907737 + G 81 -15.2 -3.01712 | gap 1, opp_overlap 1907701, overlap 1907697 1907700 1907701 GCTGCGGCCGGATGC ACAGGAACGCCAGCGGC-GCG ATG CGCCGCCGCCGGCGCTTCTGG TATTGCCCGGAAGCC TERM 1788 1907697 - 1907734 + G 78 -15.5 -2.73875 | gap 1, opp_overlap 1907701, overlap 1907694 1907700 1907701 GCGGCCGGATGCACA GGAACGCCAGCGGC-GCG ATG CGCCGCCGCCGGCGCTTC TGGTATTGCCCGGAA TERM 1789 1907700 - 1907731 + G 79 -13.6 -3.52073 | gap 1, opp_overlap 1907701, overlap 1907697 1907694 1907701 GCCGGATGCACAGGA ACGCCAGCGGC-GCG ATG CGCCGCCGCCGGCGC TTCTGGTATTGCCCG TERM 1790 1907701 - 1907730 + G 84 -17.1 -2.70923 | gap 1, opp_overlap 1907701, overlap 1907700 1907697 1907694 CCGGATGCACAGGAA CGCCAGCGGC-GCG ATG CGCCGCCGCCGGCG CTTCTGGTATTGCCC TERM 1791 1907730 - 1907701 - g 93 -19.3 -3.2794 | gap 1, opp_overlap 1907701 1907700 1907697 1907694 CCGGATGCACAGGAA CGCCAGCGGC-GCG ATG CGCCGCCGCCGGCG CTTCTGGTATTGCCC TERM 1792 1907892 - 1907939 + G 71 -5.5 -4.34402 | gap 3, opp_overlap 1907875, overlap 1907883 CGCAGTCGCGAGCTG GCCGC-TGC-AGCCCCGAATCGTC GTT GGCGAG-CAGGGCAAGCAAGCGGC TTTTCGTGTCGCCCG Nham_1707 1907134 - 1908324 + | lipid-A-disaccharide synthase gltA 1909687 - 1908386 - | type II citrate synthase TERM 1793 1909655 - 1909665 + g 77 -2.4 -5.03945 | CGTGTTGTCGACCGT CAGC GTT GCGG TTTTTGTGCTTGTTG TERM 1794 1909717 - 1909754 + r 77 -12.1 -3.61398 | gap 1 TGAGATCGTTGCGGG CCGGCTGGTTCTCTCGAT GAG ATAGAGAGA-CTGGCCGG TTATTCCAGAAGCGC gltX 1911307 - 1909832 - | glutamyl-tRNA synthetase Nham_1710 1911461 - 1913137 + | glutaminyl-tRNA synthetase TERM 1795 1914237 - 1914263 + G 71 -13.6 -2.59876 | opp_overlap 1914234, overlap 1914238 1914239 CGATCAAGAAATGGT CGGCGGCGGCGG CGC TCGCCGCGGCTG CGTTTTATCTCCTGC TERM 1796 1914238 - 1914265 + G 95 -10.4 -4.58424 | opp_overlap 1914234, overlap 1914237 1914239 GATCAAGAAATGGTC GGCGGCGGCGGC GCTC GCCGCGGCTGCG TTTTATCTCCTGCTG TERM 1797 1914239 - 1914264 + G 77 -13.9 -3.34332 | opp_overlap 1914234, overlap 1914237 1914238 ATCAAGAAATGGTCG GCGGCGGCGGC GCTC GCCGCGGCTGC GTTTTATCTCCTGCT Nham_1711 1913225 - 1914466 + | ComEC/Rec2-related protein TERM 1798 1914993 - 1914974 - g 73 -6.4 -4.38712 | opp_overlap 1914986, overlap 1914975 TCTAGTTCCACAAAA GGGTGACA CAGG TGTCACCG ATAAAAAGGGTGACA TERM 1799 1915041 - 1915001 - g 100 -12 -4.87665 | opp_overlap 1914986, overlap 1915034 TGTCACCGATAAAAA GGGTGACATTCCTGTC ACCGAAACG GACGAGAATGTCACCC TAAATGGTAGTTATG Nham_1712 1914645 - 1915949 + | hypothetical protein Nham_1713 1916828 - 1917715 + | hypothetical protein TERM 1800 1918539 - 1918554 + G 74 -5.4 -4.55128 | gap 1 TATATCCGCGATACT GGCGTCG CAC CGA-GCC TTTTACTTTCGAGCT Nham_1714 1917972 - 1918844 + | hypothetical protein Nham_1715 1918855 - 1919265 + | hypothetical protein Nham_1716 1919265 - 1919711 + | hypothetical protein TERM 1801 1919824 - 1919849 + G 72 -11.9 -3.32844 | gap 1 CGCCGTGTCCGCGTC GGGCGT-GACCG TCA CGGTTGACGCCC TTATGCGATGCCCCC Nham_1717 1919711 - 1920931 + | Phage portal protein, HK97 Nham_1718 1920928 - 1921458 + | peptidase U35, phage prohead HK97 TERM 1802 1921575 - 1921555 - g 71 -11.1 -3.51232 | opp_overlap 1921568, overlap 1921551 CGCGGCCGAAATCAA GTCGGCGCT TGA AGCGCTGAC CGCTGACGTCAACAC Nham_1719 1921475 - 1922629 + | phage major capsid protein, HK97 Nham_1720 1922688 - 1923074 + | hypothetical protein Nham_1721 1923173 - 1923319 + | hypothetical protein Nham_1722 1923319 - 1923669 + | HNH nuclease / phage phi-105 holin-like protein Nham_1723 1923943 - 1924245 + | phage protein TERM 1803 1924562 - 1924539 - g 74 -12.4 -3.50447 | opp_overlap 1924543, overlap 1924540 GCAACGCTGAGAGAA GCAACGGCGG AATC CCGCCGTTGG TCGGCAGAGTTGGGC TERM 1804 1924561 - 1924540 - g 78 -15.9 -2.69947 | opp_overlap 1924543, overlap 1924539 CAACGCTGAGAGAAG CAACGGCGG AATC CCGCCGTTG GTCGGCAGAGTTGGG TERM 1805 1924543 - 1924558 + G 70 -11.8 -3.14463 | opp_overlap 1924540 1924539 CGCTGAGAGAAGCAA CGGCGG AATC CCGCCG TTGGTCGGCAGAGTT Nham_1724 1924242 - 1924658 + | phage terminase, small subunit, putative, P27 Nham_1725 1924655 - 1924993 + | hypothetical protein TERM 1806 1925252 - 1925237 - g 76 -8.2 -4.19953 | opp_overlap 1925236 GAGGCAATCGCAAAA GCAGCC TGTC GGCCGC GATTTCGCTGCTTCA Nham_1726 1924990 - 1926612 + | phage terminase Nham_1727 1927555 - 1928358 + | phage integrase TERM 1807 1928890 - 1928867 - T 74 -13.8 -2.57931 | overlap 1928866 CGGACTGCTCAGAAC GCCGCTGCGC TGGA GCGGAGCGGC CATCATCGGGCTGGC TERM 1808 1929423 - 1929391 - T 87 -15.5 -3.28712 | TGTCGGCGGTGACAA GCCGACGCGCATCGG CTC CCGATCGGCGCCGGC GCGCCCGGTCGATGC TERM 1809 1929491 - 1929533 + T 72 -5.6 -4.54727 | opp_overlap 1929496, overlap 1929490 1929492 ACGCTCTGCCGCCGA TTAGAGCCTTCGCTTCTGAT GGA ATCAGAAGCGGGCTCTATGA TTTTGATTTGACGCG TERM 1810 1929492 - 1929530 + T 87 -14.9 -3.22314 | gap 2, opp_overlap 1929496, overlap 1929490 1929491 CGCTCTGCCGCCGAT TAGAGCCTTCGCTTCTGAT GGA ATCAGAAGCG--GGCTCTA TGATTTTGATTTGAC Nham_1729 1930298 - 1929597 - | LexA repressor Nham_1730 1931676 - 1930462 - | MoeA-likedomain-containing protein Nham_1731 1932303 - 1932695 + | hypothetical protein moaC 1933199 - 1932684 - | molybdenum cofactor biosynthesis protein C Nham_1733 1934202 - 1933357 - | indole-3-glycerol-phosphate synthase TERM 1811 1933578 - 1933592 + g 73 -11.4 -3.5627 | overlap 1933572 1933587 TCGGAATATGCGGCG CCAGCG CTT CGCTGG TTTCGAGCGTCGTCT TERM 1812 1934123 - 1934167 + g 74 -12.8 -3.36968 | opp_overlap 1934121 1934122, overlap 1934124 GCGGCGGCCAGAACC TCGCTGAGG-GAGCGCGCGCGC TTT GCGCTCGCGATCTCCTC-GCGC TTGTAGGCTTCGATC TERM 1813 1934124 - 1934166 + g 80 -16.3 -2.6186 | opp_overlap 1934121 1934122, overlap 1934123 CGGCGGCCAGAACCT CGCTGAGG-GAGCGCGCGCGC TTT GCGCTCGCGATCTCCTC-GCG CTTGTAGGCTTCGAT trpD 1935226 - 1934213 - | anthranilate phosphoribosyltransferase Nham_1735 1937174 - 1935267 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1814 1935387 - 1935399 + g 80 -4.8 -4.82667 | CAGGCTGCGCTGGAT GCTG TCCTT CAGC TTTTTCATCTCATCG TERM 1815 1937543 - 1937524 - g 76 -7.8 -4.36914 | CGGCCCCGCACAAAA GGCCGATC TGCT GATCTGCC CGCCGGCGACGCTGG Nham_1736 1937414 - 1938166 + | triosephosphate isomerase TERM 1816 1938310 - 1938336 + F 70 -12.4 -2.78712 | opp_overlap 1938309 1938308 1938302 1938301 GTCAAATTCGAAACT CCACTAGCAACT TAT ATTTGCTAGTGG TCCTTCGATTCCGAC TERM 1817 1938722 - 1938695 - g 76 -9.2 -3.99324 | gap 1, opp_overlap 1938669, overlap 1938719 GGCTACGACCACAAA CCGG-GTTCGATC CTG GATGGAACACCGG CATCGCAGTCCCAGC TERM 1818 1938730 - 1938781 + G 71 -13.4 -2.65388 | opp_overlap 1938719, overlap 1938730 1938740 1938743 AACACCGGCATCGCA GTCCCAGCCGGCGGGAGGCGCGAC GCCG GTCGCTCCGCCGGCCAGCGGCGGC CTTCTCGATTCGCTG TERM 1819 1938730 - 1938782 + G 71 -11 -3.4285 | gap 1, opp_overlap 1938719, overlap 1938730 1938740 1938743 AACACCGGCATCGCA GTCC-CAGCCGGCGGGAGGCGCGAC GCCG GTCGCTCCGCCGGCCAGCGGCGGCC TTCTCGATTCGCTGA secG 1938470 - 1938862 + | preprotein translocase subunit SecG TERM 1820 1939417 - 1939389 - g 73 -12.5 -3.16564 | overlap 1939398 TCCCCACGTCACCAA CGCCATCAAGGAC TTC ATCCTTGACGGCA ACGACGGCTACGACT TERM 1821 1940273 - 1940239 - g 78 -14.2 -3.07994 | GCCAATTCGACCGAA TTCGGCCCCACCAGCG AGC CGCTGGTGGGCCTGAT GACGGAATGGCTGCG Nham_1738 1939021 - 1940658 + | CTP synthetase Nham_1739 1940812 - 1941675 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1822 1941842 - 1941854 + G 70 -10.5 -3.60151 | CGCCGCCGGCCTGTC GGCGG TCA CCGCC TTCTCGTTTGCCACC TERM 1823 1941962 - 1941992 + G 73 -12.6 -3.15249 | CATCGCGAACGTTGC CGGCGCGCTGTG CACGTCC TACAGCGCGCTG TTCGTGACGCGTATC Nham_1740 1941672 - 1942883 + | major facilitator transporter TERM 1824 1943110 - 1943120 + G 73 -8.2 -4.07568 | opp_overlap 1943110 1943109 1943105 TCTCGCACAACCAAT GGCG GCG CGCC TTTTGCCGGAGGCGG Nham_1741 1942969 - 1943685 + | hypothetical protein Nham_1742 1944179 - 1943703 - | 7-cyano-7-deazaguanine reductase Nham_1743 1944365 - 1945648 + | phosphopyruvate hydratase TERM 1825 1945716 - 1945675 - T 83 -12.2 -3.92641 | opp_overlap 1945678, overlap 1945678 AAGCGGACTTACAAA CAACCGGCCGGGGCGTGG GGATTT CCGCGCACCGACCAATTG CGTCGGCGATGACGT TERM 1826 1945713 - 1945678 - T 71 -8.1 -4.09117 | opp_overlap 1945678, overlap 1945675 CGGACTTACAAACAA CCGGCCGGGGCGTGG GGATTT CCGCGCACCGACCAA TTGCGTCGGCGATGA Nham_1744 1946415 - 1945741 - | hypothetical protein Nham_1745 1946679 - 1947929 + | hypothetical protein Nham_1746 1947937 - 1948521 + | isoprenylcysteine carboxyl methyltransferase Nham_1747 1948668 - 1949225 + | NADPH-dependent FMN reductase Nham_1748 1949286 - 1949603 + | septum formation initiator TERM 1827 1949741 - 1949764 + F 81 -13.2 -3.63305 | gap 1, opp_overlap 1949740 1949739 TGCACCGCAGAAACC GCGCGCG-TCA ATT TGATCGCGCGC TTTCAAGGTTGTCTG Nham_1749 1949824 - 1950846 + | pyruvate dehydrogenase (lipoamide) TERM 1828 1951368 - 1951389 + G 71 -8.7 -3.96148 | gap 1, opp_overlap 1951370 TGCCATGGCCGAGGA GATG-CGCCG CGA CGGCGACGTC TTTCTGATGGGAGAG Nham_1750 1950874 - 1952298 + | pyruvate dehydrogenase subunit beta TERM 1829 1952511 - 1952487 - g 84 -10.8 -4.12188 | gap 1 GCACCATCGCGAAAA TCCTG-GTGCC TGAG GGCACGCAGGA TGTGCCGGTCAACGA TERM 1830 1953028 - 1953001 - g 71 -11.2 -3.40403 | overlap 1952984 1953004 CGTGCCGCATGACAA CATGCGCCGCAC GATC GCGCAGCGCCTG ACCGCCTCGATACAG TERM 1831 1953539 - 1953481 - g 83 -15.9 -3.14344 | CACCGCGGTCATCAA CCCGC-CGCACGCCACCATCCTCGCTGTC GGC GCCAGCGAGGAGCG-GGCGGTCGTGCGGG GCGGCAAGATAGAGG Nham_1751 1952312 - 1953676 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 1832 1953811 - 1953851 + F 75 -11.9 -3.28712 | gap 3, overlap 1953818 TCAGCCGCGAACCCC GGTGGC--CGC-CGCGGCGC AAGC GCGCCGCTCGCGCCGCCACC TTCTCCCACAAGGGG TERM 1833 1953818 - 1953850 + F 78 -14.7 -2.57132 | overlap 1953811 CGAACCCCGGTGGCC GCCGCGGCGCAAGCG CGC CGCTCGCGCCGCCAC CTTCTCCCACAAGGG TERM 1834 1954224 - 1954212 - g 82 -3.3 -5.1356 | overlap 1954216 1954217 CCTGATGAAGAAAAA CAAGG TCA CCGTG ATCTGGGGCGAGGCG Nham_1752 1953895 - 1955328 + | dihydrolipoamide dehydrogenase TERM 1835 1955714 - 1955680 - f 71 -11.4 -3.19192 | gap 1, opp_overlap 1955712, overlap 1955689 1955690 CGTCATGGAACGGAA GGTCAGGAACGCGCG CGCGAT CGCGCGCACCTG-CC GGGGGCCGCTGTCGG TERM 1836 1955708 - 1955689 - f 79 -12.8 -3.1886 | overlap 1955680 1955690 ACGGAAGGTCAGGAA CGCGCGCG CGAT CGCGCGCA CCTGCCGGGGGCCGC TERM 1837 1955707 - 1955690 - f 78 -14.1 -2.50994 | overlap 1955689 1955680 CGGAAGGTCAGGAAC GCGCGCG CGAT CGCGCGC ACCTGCCGGGGGCCG Nham_1754 1955957 - 1956778 + | Sel1-like Nham_1755 1957697 - 1956897 - | exodeoxyribonuclease III (xth) Nham_1756 1958144 - 1957812 - | HesB/YadR/YfhF TERM 1838 1959039 - 1959056 + G 77 -14.1 -3.2614 | GACCACCGGCGCGGC GCCGCGC TGGT GCGCGGC TTGATCTCCCACCTG Nham_1757 1958256 - 1959470 + | deoxyguanosinetriphosphate triphosphohydrolase Nham_1758 1959509 - 1961302 + | arginyl-tRNA synthetase Nham_1759 1961403 - 1962848 + | sporulation related Nham_1760 1962896 - 1963921 + | Beta-N-acetylhexosaminidase TERM 1839 1964671 - 1964686 + G 76 -6 -4.64861 | opp_overlap 1964671 1964673, overlap 1964673 GATCTGAACCAGAAA GAGGCG TTCG CGCCGC TTTATTTTCGCAAGC Nham_1761 1963918 - 1964757 + | chromosome segregation and condensation protein ScpA TERM 1840 1964840 - 1964880 + G 74 -10.4 -3.68351 | gap 1, opp_overlap 1964835, overlap 1964839 AGTCGGAACAGCCCG CAGC-GCGCCCCGAGGAAC TGCG GTTGCTGGAGGCGCTGCTG TTTGCCTCGTCCGAG Nham_1762 1964779 - 1965525 + | putative transcriptional regulator Nham_1763 1966212 - 1965589 - | multiple antibiotic resistance (MarC)-related proteins TERM 1841 1966086 - 1966059 - G 85 -15.6 -3.40403 | gap 1, opp_overlap 1966083, overlap 1966060 CCGTCGCGATCAGAA CGGCG-GCCGCGA TGG TCGCGGCGCGCCA TCCGGTGTCGCGCCG TERM 1842 1966085 - 1966060 - G 83 -16.9 -2.64099 | gap 1, opp_overlap 1966083, overlap 1966059 CGTCGCGATCAGAAC GGCG-GCCGCGA TGG TCGCGGCGCGCC ATCCGGTGTCGCGCC TERM 1843 1966083 - 1966107 + g 71 -11.3 -3.53761 | opp_overlap 1966060 1966059 CGATGGTCGCGGCGC GCCATCCGGTG TCG CGCCGGGCGGC TTTCGACAGGCCTTG Nham_1764 1966362 - 1969103 + | DNA gyrase subunit A TERM 1844 1969123 - 1969153 + T 75 -9 -3.97356 | overlap 1969124 1969152 GCTTCGCCCAGAGCC TTTCCGCTTCTGGT GGC ATCAGAAGCGGGGC TTTAAGTTTTGATTT TERM 1845 1969124 - 1969152 + T 74 -12.5 -2.96787 | overlap 1969123 CTTCGCCCAGAGCCT TTCCGCTTCTGGT GGC ATCAGAAGCGGGG CTTTAAGTTTTGATT TERM 1846 1969256 - 1969279 + T 100 -16 -3.75332 | opp_overlap 1969256 TATAGGCCGGCAAAA GCCGCCCGTG GGCA TACGGGCGGC TTTGCCTTGGAGGCT TERM 1847 1969279 - 1969256 - T 100 -15.3 -4.09243 | opp_overlap 1969256 TATAGGCCGGCAAAA GCCGCCCGT GGGCAT ACGGGCGGC TTTGCCTTGGAGGCT Nham_1765 1969571 - 1969317 - | hypothetical protein coaD 1969899 - 1970396 + | phosphopantetheine adenylyltransferase TERM 1848 1970932 - 1970908 - g 88 -14.9 -3.6968 | GGACAAGCTGAAGAA GGCGCCCGCCG GCT CGGCGAGCGGC ACCGTCACCGATCCG Nham_1767 1970429 - 1970989 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type Nham_1768 1970999 - 1971427 + | hypothetical protein Nham_1769 1971424 - 1971867 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 1849 1971884 - 1971904 + F 76 -14 -2.76263 | overlap 1971881 CGCTGACACCCATCA TGCGCGGG CTTGA CCCGCGCA TCCTTCCATCCTCAC TERM 1850 1972377 - 1972394 + G 74 -4.8 -4.58773 | AGCAAGGGCGAGGAG GGCGAG GTCACG TTCGCC TTTTCGTTTCATGGG TERM 1851 1972996 - 1973006 + G 72 -2.4 -4.75472 | CTCACGCCATCGCCG CAGG CTA CCGG TTTTATTCCTATGGC queA 1971963 - 1973060 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 1852 1973107 - 1973152 + G 83 -15.3 -3.15544 | overlap 1973087 CGACGGCGAGGCTCG TACCGGCCTTCTCACCACGCC GCAC GGCGCGGTGCGAACGCCGGCG TTCATGCCGGTCGGG tgt 1973057 - 1974190 + | queuine tRNA-ribosyltransferase Nham_1772 1974436 - 1974218 - | hypothetical protein Nham_1773 1974659 - 1975636 + | cysteine synthases Nham_1774 1975675 - 1975914 + | hypothetical protein TERM 1853 1975981 - 1975947 - T 75 -5.8 -4.56775 | gap 2 ACGTGGCTTGAAAAA TCAGGAGCGCGACAGC GAGAT ACTG--GCGCCCCTGA ACTGTCCCTCGGAGC Nham_1775 1976426 - 1975947 - | hypothetical protein Nham_1776 1976814 - 1976464 - | hypothetical protein Nham_1777 1977414 - 1977025 - | hypothetical protein TERM 1854 1977807 - 1977825 + H 78 -11.6 -3.6502 | opp_overlap 1977808, overlap 1977808 1977823 CTTGACGTAAGAAAA ACGCCGGG AGG CCCGGCGG TTTGCGTCGCGGATC TERM 1855 1977808 - 1977824 + H 83 -15.1 -2.78798 | opp_overlap 1977808, overlap 1977807 1977823 TTGACGTAAGAAAAA CGCCGGG AGG CCCGGCG GTTTGCGTCGCGGAT TERM 1856 1977824 - 1977808 - H 100 -15.1 -5.10461 | opp_overlap 1977807 1977808 1977823 TTGACGTAAGAAAAA CGCCGGG AGG CCCGGCG GTTTGCGTCGCGGAT TERM 1857 1977845 - 1977868 + H 70 -11.8 -2.79574 | gap 1, overlap 1977837 1977842 CGTCGCGGATCGTCT TCCGGAC-GGA CTA TCCTGTCCGGA TGGTTGATGCGTGTG Nham_1778 1977868 - 1978167 + | hypothetical protein TERM 1858 1978246 - 1978270 + T 70 -12.1 -2.75064 | overlap 1978244 ATGCGAACCGGTATC CATCCTCGGGT CAA GCCCGAGGACG TGGTTCGCTCGAAAA TERM 1859 1978335 - 1978320 - T 86 -11.8 -3.94877 | opp_overlap 1978320 AGCTCCGAAGAATAA CCCCGC TCCG GCGGGG TTTTCTATTTCTTCC TERM 1860 1978320 - 1978335 + T 100 -11.8 -4.89838 | opp_overlap 1978320 AGCTCCGAAGAATAA CCCCGC TCCG GCGGGG TTTTCTATTTCTTCC TERM 1861 1978726 - 1978712 - T 74 -12.8 -3.01712 | CCGCGCTGGTCAATA GCGCCG GAT CGGCGC GGGAGACTGTACAAC Nham_1779 1981506 - 1978837 - | glycosyl transferase family protein TERM 1862 1979570 - 1979583 + g 76 -8.1 -4.1552 | overlap 1979559 1979567 AAGCCGCCGTAAGCC CAGCG ATGG CGCTG TTTCTTGAACGCCTC TERM 1863 1979978 - 1979960 - G 73 -11 -3.54475 | opp_overlap 1979960 GGCTGCACCACATAA TCGGCATC GAT GACGCCGA TAATCTCGGCGTCGG TERM 1864 1981684 - 1981694 + r 74 -6.8 -4.34482 | overlap 1981674 1981674 GGTTTCGTCGCGGCG GCTG CGG CAGC TATTTTTTTGGCGGG Nham_1780 1982269 - 1981694 - | hypothetical protein TERM 1865 1981932 - 1981905 - G 73 -11.2 -3.61356 | ACCAGGCAGCGGAAA GCTGCCTGAACG TGGC CGCCCGGGCAGC CGAAGCGATCGTAGA TERM 1866 1982099 - 1982114 + g 71 -6 -4.26351 | overlap 1982100 GCGCTGGCTGTCCTT GGCGGC ATCG GCCGCA TTTGTTGAGTTGGTC Nham_1781 1982700 - 1984184 + | putative beta (1-6) glucans synthase Nham_1782 1984527 - 1984147 - | hypothetical protein Nham_1783 1985988 - 1984594 - | hypothetical protein TERM 1867 1984718 - 1984729 + g 100 -7.2 -5.31275 | CGTGATGACGTGTGC GCCG GTCT CGGC TTTTTTGTCGTGGCG TERM 1868 1985249 - 1985274 + g 71 -6.1 -4.34402 | gap 1 GCGGGCGAATCCTGC GCGGCGGTCGCA GGT TGCGA-TGCGGC TTTTGGTGTGACCGG TERM 1869 1985836 - 1985814 - G 77 -13.4 -3.34233 | overlap 1985817 CCAGAAGTGCGACAA TGACGGCTCC GAC GGAGCCGGCA CCCCATGATCCGAGG TERM 1870 1985833 - 1985817 - G 74 -13.7 -2.83747 | overlap 1985814 GAAGTGCGACAATGA CGGCTCC GAC GGAGCCG GCACCCCATGATCCG TERM 1871 1986051 - 1986014 - H 79 -13.5 -3.09492 | gap 1, opp_overlap 1986020 1986042, overlap 1986019 GGCCGAATGCTAACA GGAAATCCGCCCGAT-CT CAG AGCACCGGGCGGTTTCCC CTTCGGGCAAAAACG TERM 1872 1986046 - 1986019 - H 72 -8.4 -3.9344 | gap 1, opp_overlap 1986020 1986042, overlap 1986014 AATGCTAACAGGAAA TCCGCCCGAT-CT CAG AGCACCGGGCGGT TTCCCCTTCGGGCAA TERM 1873 1986020 - 1986045 + H 72 -9.7 -3.66178 | gap 1, opp_overlap 1986019 1986014, overlap 1986042 ATGCTAACAGGAAAT CCGCCCGAT-CT CAG AGCACCGGGCGG TTTCCCCTTCGGGCA TERM 1874 1986381 - 1986417 + G 70 -13.1 -2.83012 | gap 3 CCGCGCACGCCGTGC TCG-CGGCG-CGCGAGGC CATC GCC-CGCGGCGCCGACGA TCTGGTGATCGCGTT TERM 1875 1986699 - 1986687 - g 87 -5.5 -5.13521 | overlap 1986663 AAATCATTGAAAAAA TCGGC AAC GCCAA CAGCAAGGGCGAATA Nham_1784 1986116 - 1987474 + | nucleotidyl transferase Nham_1785 1987738 - 1987508 - | hypothetical protein TERM 1876 1987553 - 1987577 + g 71 -10.7 -3.43288 | gap 1, overlap 1987538 1987536 1987543 CCGCGTCAGGCGCCA GCCGC-GCGG CTTTGC CCGCTGCGGC TTCTCGTCGGATTTA TERM 1877 1987639 - 1987661 + g 78 -6.3 -4.63486 | gap 2, overlap 1987615 TGCGGAACGGCGGCG GCCAGTTCGCG AGG CGCG-AC-GGC TTTTGTTCGAGCGAT Nham_1786 1988458 - 1988219 - | hypothetical protein TERM 1878 1988445 - 1988466 + g 78 -12.3 -3.68529 | CTGTCGATCCTTCGG CGCGTCACG ATCA TGTGACGCG TTTGGGTAATGCAAT TERM 1879 1988581 - 1988610 + H 88 -15.7 -3.02511 | opp_overlap 1988577 1988580 1988579, overlap 1988586 GTCCTAAACAACACC GCCGGCCGGCATC TGGG GGTGCCGGTTGGC TATTCCAAAAGTGGG TERM 1880 1988586 - 1988605 + H 71 -11.4 -3.1855 | opp_overlap 1988577 1988580 1988579, overlap 1988581 AAACAACACCGCCGG CCGGCATC TGGG GGTGCCGG TTGGCTATTCCAAAA Nham_1787 1989034 - 1989699 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 1881 1990079 - 1990061 - g 93 -17.4 -3.42996 | GACGATCGATCACAA CGCGCCGG CTC CCGGCGCG AGCCGGTCCGACGTC tatA 1989876 - 1990115 + | twin argininte translocase protein A Nham_1789 1990298 - 1990834 + | twin-arginine translocation protein TatB TERM 1882 1991633 - 1991604 - g 70 -9.9 -3.54424 | gap 1 GGCCACCGCTGCAAA GGCCACCGC-CGCC AAG GGCGCGCAGCCGCC ACCGCCCGACGGCAC Nham_1790 1990831 - 1991679 + | Sec-independent protein translocase TatC TERM 1883 1991795 - 1991837 + F 71 -12.7 -2.66326 | gap 1, overlap 1991793 1991792 CCAATCGCACCCATT CGGGGTACTG-GATGCCCGC TTTC GCGGGCATGACAGCGCCCTG TGAATTTCGCCTTGG Nham_1791 1991865 - 1993277 + | seryl-tRNA synthetase surE 1993394 - 1994161 + | stationary phase survival protein SurE Nham_1793 1994633 - 1994253 - | response regulator receiver domain-containing protein Nham_1794 1994916 - 1995569 + | protein-L-isoaspartate O-methyltransferase TERM 1884 1996510 - 1996487 - g 70 -12.4 -3.14344 | gap 1, opp_overlap 1996485 1996487 CACGGTGCCGACTAA GGCCGCCGCGG TGG CCGCG-CAGCC TGTTGTCGCTGCGGC Nham_1795 1995726 - 1997075 + | peptidase M23B TERM 1885 1997114 - 1997151 + F 100 -17.7 -3.99592 | overlap 1997117 CCGGACCTCTTAATT CTGCATCGGCCGCGCAG TCTG CTTCGCGGCCGATGTCG TTTGTGATCCTCGCT TERM 1886 1997117 - 1997148 + F 100 -20.2 -3.04836 | overlap 1997114 GACCTCTTAATTCTG CATCGGCCGCGCAG TCTG CTTCGCGGCCGATG TCGTTTGTGATCCTC TERM 1887 1997606 - 1997621 + G 78 -6.8 -4.65916 | overlap 1997604 1997607 GGTTTTACGCTGCCG TCAGCG CTGG CGCTGG TTTTGTTCGGCTACG TERM 1888 1998301 - 1998350 + G 71 -6.1 -4.25283 | gap 1, opp_overlap 1998290 1998293, overlap 1998340 CGAATTACGGCGGCG GGCCG-CGGCCAGGGCGGCGCTGC GCG GCATCAACGCCGCGGTGGTCGGCC TTTTGCTGGCCGCCT TERM 1889 1998340 - 1998364 + G 79 -9.2 -4.14243 | overlap 1998301 CGGCATCAACGCCGC GGTGGTCGGC CTTTT GCTGGCCGCC TTTTACAATCCGGTC TERM 1890 1998481 - 1998514 + G 71 -13.7 -2.64155 | overlap 1998479 1998477 1998506 GCTGGTCGTTATGGT CTGCGCCGTCTGCGG CGAG CTGCTGGCGGCGCTG TAAATTTGAAGCGCG Nham_1796 1997327 - 1998517 + | chromate transporter Nham_1797 1999536 - 1998574 - | hypothetical protein Nham_1798 1999728 - 2000129 + | preprotein translocase, YajC subunit secD 2000175 - 2001776 + | preprotein translocase subunit SecD TERM 1891 2001875 - 2001899 + G 74 -9.3 -3.84451 | GCCTGCTGCCATCGC TGCGGATCGTT CCC GACGATACGCA TTTCGATTTCACGCG secF 2001793 - 2002815 + | preprotein translocase subunit SecF Nham_1801 2002812 - 2003198 + | hypothetical protein Nham_1802 2003295 - 2004158 + | squalene/phytoene synthase Nham_1803 2005265 - 2004165 - | serine/threonine protein kinase TERM 1892 2004204 - 2004216 + g 76 -5.5 -4.61231 | opp_overlap 2004204 TGACTCGAAATTGAA CCTGT CGC GCAGG TTTTTCCGGCTCTCG Nham_1804 2006726 - 2005293 - | tRNA (uracil-5-)-methyltransferase Gid TERM 1893 2006892 - 2006839 - R 100 -11.9 -4.4773 | opp_overlap 2006859, overlap 2006842 TGAGACCAAGCAAAA CATGGGATCGGCAATAAAGATGAAT ATGC ATTCATTATTATTGCCGATCCGGCG CTGTCAACCGGCAGC TERM 1894 2006889 - 2006842 - R 82 -14.4 -2.89339 | opp_overlap 2006859, overlap 2006839 GACCAAGCAAAACAT GGGATCGGCAATAAAGATGAAT ATGC ATTCATTATTATTGCCGATCCG GCGCTGTCAACCGGC TERM 1895 2006928 - 2006980 + r 83 -13.6 -3.38281 | gap 1, opp_overlap 2006935, overlap 2006928 2006934 2006972 GGCCGTGCTTGCAAT CGCAAGACCCCGGCTTCAGAGGA CTTAACGT TCCTTTGAAGCCGGGGA-TTGCA TTCCGTTTTCGGTCG TERM 1896 2006934 - 2006975 + r 90 -16.7 -3.2352 | opp_overlap 2006935, overlap 2006928 2006928 2006972 GCTTGCAATCGCAAG ACCCCGGCTTCAGAGGA CTTAACGT TCCTTTGAAGCCGGGGA TTGCATTCCGTTTTC TERM 1897 2006974 - 2006935 - R 91 -18 -3.09492 | opp_overlap 2006934 2006928 2006928 2006972 CTTGCAATCGCAAGA CCCCGGCTTCAGAGGA CTTAACGT TCCTTTGAAGCCGGGG ATTGCATTCCGTTTT TERM 1898 2006982 - 2007010 + r 73 -11.2 -3.39717 | gap 1, overlap 2006972 2006928 AGCCGGGGATTGCAT TCCG-TTTTCGGT CGCG ACCGAAAAGCGGA TTACTATTGATCGGT Nham_1805 2007937 - 2007014 - | hypothetical protein Nham_1806 2008335 - 2008709 + | hypothetical protein Nham_1807 2009143 - 2008811 - | acetyltransferase-like TERM 1899 2008945 - 2008965 + g 71 -9.6 -3.71873 | opp_overlap 2008907 2008928, overlap 2008946 CCGAGGCAATGCCGC GGCCGCGC AGCTC GCGCGGCG TTTCGGTGTGGGTGA TERM 1900 2008946 - 2008964 + g 70 -13.1 -2.82803 | opp_overlap 2008907 2008928, overlap 2008945 CGAGGCAATGCCGCG GCCGCGC AGCTC GCGCGGC GTTTCGGTGTGGGTG Nham_1808 2009458 - 2009177 - | acetyltransferase Nham_1809 2009761 - 2010198 + | NADH dehydrogenase Nham_1810 2012104 - 2010434 - | hypothetical protein TERM 1901 2011428 - 2011442 + g 89 -11.4 -4.25104 | GTTACCGATCCGCCG GGCGAC CCG GTCGCC TTTTGCTCGGCGGAC Nham_1811 2012493 - 2013413 + | hypothetical protein Nham_1812 2014589 - 2013585 - | hypothetical protein Nham_1813 2014846 - 2015079 + | hypothetical protein TERM 1902 2016352 - 2016328 - g 74 -12.7 -3.38272 | opp_overlap 2016324 GACGACCACCCACAA GTCGCTGCGCG GTC CGCGCGGCGGC CTGATCCTGTGCAAC TERM 1903 2016754 - 2016700 - g 81 -9.8 -4.11216 | gap 1, opp_overlap 2016700 CTTCGACCCCGAAAA GCCGTTCGTGACGTCGGGCCTGCGC CTCGGC ACGCCGGCC-GCCACCACGCGCGGC TTCGGTGTCGCCGAA glyA 2015606 - 2016910 + | serine hydroxymethyltransferase Nham_1815 2017078 - 2017560 + | transcriptional regulator NrdR TERM 1904 2017773 - 2017812 + G 75 -13.4 -2.99471 | gap 1, overlap 2017776 2017795 CACGCCGAGGCCGAG GCGCTGCGGCGCGCGGGCG AGG CGGC-GCGCGGCGCGACGC TGTATGTCACGCTGG TERM 1905 2017866 - 2017852 - g 78 -7 -4.58395 | opp_overlap 2017858 2017862 CGCATGTCGGAAAAA CGCCGC CAT GCGCCG ATGCCGTGATCGCGG Nham_1816 2017557 - 2018708 + | riboflavin biosynthesis protein RibD Nham_1817 2018795 - 2019403 + | riboflavin synthase subunit alpha TERM 1906 2019559 - 2019583 + G 72 -7.7 -4.16279 | overlap 2019560 CGACGTCTCGGGCGC ACGCGCCCTGA TCG TCGAGGCGCGG TTTTACGATGATATC ribH 2019506 - 2019997 + | riboflavin synthase subunit beta TERM 1907 2020435 - 2020459 + G 74 -12.1 -3.53012 | opp_overlap 2020450, overlap 2020450 2020453 TGGGCATGGTCAACG CGGTGCTCGAT CAG ATCGCGCGCCG TTTCCGCGCCGGCGA nusB 2020005 - 2020487 + | transcription antitermination protein NusB TERM 1908 2021205 - 2021241 + G 74 -14.4 -2.57985 | overlap 2021201 2021195 TCTCGCAAAACTGTG CGCGGCATCGGGCGTC TCGGC GGTGATCGATGCCGCG TCCGTTCCGTTGTCC Nham_1820 2020534 - 2021505 + | thiamine-monophosphate kinase Nham_1821 2021588 - 2022697 + | transposase, IS4 TERM 1909 2022971 - 2022943 - T 93 -17.5 -3.28712 | opp_overlap 2022948, overlap 2022948 CGTCCGGCCGCACAA GAAAACGCCCGGC CAG GCCGGGCGTTTTG GCATTCGAGTGAGAC TERM 1910 2022948 - 2022966 + T 100 -17.4 -4.19506 | opp_overlap 2022948 2022943 GGCCGCACAAGAAAA CGCCCGGC CAG GCCGGGCG TTTTGGCATTCGAGT TERM 1911 2022966 - 2022948 - T 100 -17.4 -4.77165 | opp_overlap 2022948, overlap 2022943 GGCCGCACAAGAAAA CGCCCGGC CAG GCCGGGCG TTTTGGCATTCGAGT Nham_1822 2026110 - 2022991 - | ribonuclease TERM 1912 2023952 - 2023965 + g 77 -3.7 -4.8622 | opp_overlap 2023923 CTGTGTTCGAGGTCG CGCAG ATGG CCGCG TTTTTGATTGAGCAC TERM 1913 2023998 - 2024031 + g 71 -9.5 -3.737 | gap 1, opp_overlap 2023987 2023992, overlap 2023999 ACAACGCAACGTTAG TGCGTGTCCGCACGAC AAG GTCGTGCGT-CGCGCC TTTCATCAGAACTTC TERM 1914 2023999 - 2024030 + g 70 -13 -2.83899 | gap 1, opp_overlap 2023987 2023992, overlap 2023998 CAACGCAACGTTAGT GCGTGTCCGCACGAC AAG GTCGTGCGT-CGCGC CTTTCATCAGAACTT TERM 1915 2024215 - 2024262 + g 74 -14.9 -2.51471 | gap 1, overlap 2024214 2024258 TCCGACCTGGATGCG CGCGCGGTCGTGGCGCAGGC AGTCGCTGA GCTTGCGCTCC-ACCGCGCG GTTGCTGCGCTTCTC TERM 1916 2025915 - 2025897 - G 73 -13.2 -3.17075 | opp_overlap 2025892 TTTCGCTGAACGCAA GGAAACCG TGC CGGTTTCC GCCGTATTCGATAAA TERM 1917 2027895 - 2027866 - g 73 -3.6 -4.81551 | gap 2, overlap 2027867 2027868 2027887 GAGTGAGATGAAAAA TTCCGCGCGGATGC ACAA GCA-CC-CGCTGAA GTCGGCCGGGTTCAA Nham_1823 2026820 - 2028088 + | N-acetylmuramoyl-L-alanine amidase TERM 1918 2028608 - 2028624 + G 74 -9.3 -3.85817 | CGATTATCCCGGCAT GCTGCGC GCG GCGCTGC TTTATGCCCAGAACT TERM 1919 2028900 - 2028916 + G 71 -10.8 -3.53012 | overlap 2028887 TTGACGGTCGCCGAG GCCGCC TATCT GGCGGC TTTGCCCAAGGCGCC Nham_1824 2028255 - 2030786 + | penicillin-binding protein 1A TERM 1920 2030783 - 2030819 + F 100 -17.5 -4.68539 | opp_overlap 2030788 GACCGGCGGGCTTTA CTAGAGTCCGATTCAAC TGC GTTGGATCAGACTCTAG TTTTATCCTTTTGAT TERM 1921 2031247 - 2031205 - g 70 -12.6 -2.83012 | overlap 2031219 2031236 2031239 AACTCGAGGACCAGA TCGGCATGATCGAACTCGGC GAG GCCGAGAACGATCAGGCCAT CGTCAACGATTCCGA TERM 1922 2031300 - 2031287 - g 75 -3.7 -4.70626 | opp_overlap 2031296, overlap 2031288 GAAGAATCTCAAAAA GGAGG TCGC CCGCC GCGAGCTCGAGGCGC Nham_1825 2031132 - 2032100 + | peptide chain release factor 2 TERM 1923 2032823 - 2032785 - g 73 -10.9 -3.65902 | gap 1, opp_overlap 2032798 2032802, overlap 2032770 CGGACTCCACGCAAA GTGTGCCGGGAGGC-CCG CCGT CGGCGCTTCACGGCGCAC AGGCGCCGGTGGCTG TERM 1924 2033228 - 2033210 - g 74 -13.1 -3.35073 | opp_overlap 2033199 2033197 ATCATCGGCAACGAA CCGGCGC AACTG GCGCCGG GTTCGCCGGTCGATC Nham_1826 2032463 - 2033926 + | Type I secretion outer membrane protein, TolC Nham_1827 2034213 - 2034917 + | hypothetical protein TERM 1925 2034984 - 2035017 + F 72 -5.1 -4.63932 | CTTGCCCCTGTCGGA CGTCTTGAAGTCGGC GTCT GCCGCCCTTGAGCCG TTTTATTCGGCGGTC TERM 1926 2037929 - 2037918 - g 72 -7.2 -4.18737 | overlap 2037915 GGAAGAAAAAGACAA GCGG GAAG CCGC CGTTGCGCGCAAAGC valS 2035123 - 2037987 + | valyl-tRNA synthetase Nham_1829 2037984 - 2039150 + | major facilitator transporter Nham_1830 2039751 - 2039131 - | 3-methyladenine DNA glycosylase Nham_1831 2039878 - 2040837 + | lipoyl synthase Nham_1832 2040849 - 2041316 + | cyclase/dehydrase Nham_1833 2041954 - 2041328 - | CinA-like Nham_1834 2043215 - 2041956 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 1927 2043247 - 2043230 - H 80 -4.7 -5.00616 | opp_overlap 2043239 2043240, overlap 2043240 TGCCCGCGCAAAAAA CAGCAGG ACAC CCGGCCG TGGGCGGTAGGGATT Nham_1835 2043383 - 2044432 + | dihydrouridine synthase TIM-barrel protein nifR3 TERM 1928 2044595 - 2044571 - g 83 -14.3 -3.53343 | AATCCTTCTTCGAAA TGTCGGCGCAG TTC CTGCGACGACA GCCGCTGAAGGAAGT TERM 1929 2045571 - 2045539 - g 73 -8.3 -4.09243 | overlap 2045541 2045542 GACACCGGCCCAAAA CATCGGCAAAGCGAC GAT GCCGCCGTGCCGGTA ATGCCGTCACCTGCC Nham_1836 2044429 - 2045604 + | signal transduction histidine kinase, nitrogen specific, NtrB TERM 1930 2046621 - 2046606 - g 73 -8.2 -4.07568 | CGCCCTCGCCGAAAA GGACGG GTTG CCGCCC AAGAAGCTCGATGCG TERM 1931 2046649 - 2046627 - g 70 -9.9 -3.61398 | gap 1 GTTGCCGCCCAAGAA GCTCGATGCG CTTG CGC-TCGAGC GCTTGAAGCGGCATC Nham_1837 2045614 - 2047056 + | nitrogen metabolism transcriptional regulator, NtrC, Fis family Nham_1838 2047249 - 2049543 + | multi-sensor signal transduction histidine kinase Nham_1839 2049561 - 2050931 + | two component, sigma54 specific, Fis family transcriptional regulator Nham_1840 2050961 - 2051818 + | D-amino acid aminotransferase TERM 1932 2051989 - 2051974 - f 84 -2.5 -5.40474 | ATCCGGTTAAAAAAA CGCAA AGCGAA CTGCG GGATAAAAAAAATGG hfq 2052001 - 2052249 + | RNA-binding protein Hfq Nham_1842 2052318 - 2053652 + | GTP-binding protein, HSR1-related Nham_1843 2053657 - 2053893 + | hypothetical protein Nham_1844 2053890 - 2055326 + | succinate-semialdehyde dehydrogenase (NAD(P)+) mazG 2056200 - 2055379 - | nucleoside triphosphate pyrophosphohydrolase TERM 1933 2055802 - 2055819 + g 73 -3.3 -4.73388 | gap 1, overlap 2055800 2055803 TTCCTTTATCGGTTT G-CGCGCG GCG CGCTCGGC TTTTTCCTCCGCCTT Nham_1846 2056335 - 2057051 + | ExsB Nham_1847 2057235 - 2057531 + | hypothetical protein Nham_1848 2057586 - 2058857 + | outer membrane efflux protein TERM 1934 2059215 - 2059197 - g 71 -11 -3.47218 | CGATCAAAAAGCGAA TCGGCGAC GCG GTCGCCAA AGACGACCAGCTCGC Nham_1849 2058854 - 2059837 + | secretion protein HlyD TERM 1935 2061284 - 2061308 + G 72 -12.1 -3.36803 | overlap 2061262 2061271 GGCGCTCACCGTGCT GATGGCGTTGC TGG GCGCCGCCATC TTCTCCGTGACGTTC Nham_1850 2059827 - 2063045 + | heavy metal efflux pump CzcA Nham_1851 2063231 - 2063584 + | hypothetical protein Nham_1852 2063682 - 2064092 + | hypothetical protein Nham_1853 2064089 - 2065504 + | secretion protein HlyD TERM 1936 2066136 - 2066109 - g 76 -8.4 -4.21908 | gap 1, overlap 2066111 GATCACGATGCAAAA GATGCGTGACGCG ATC CGCGCCA-GCAAC GCCGACGTCGGCGGC TERM 1937 2066134 - 2066111 - g 71 -9.6 -3.70674 | gap 1, overlap 2066109 TCACGATGCAAAAGA TGCGTGACGCG ATC CGCGCCA-GCA ACGCCGACGTCGGCG TERM 1938 2067602 - 2067629 + G 84 -15.6 -3.322 | TGCCCGGCACCTCCT CGGCCTATGCCG AGCG CGGCATAGGCGG TTACTATCTGGACAT Nham_1854 2065501 - 2068683 + | heavy metal efflux pump CzcA Nham_1855 2068751 - 2068951 + | hypothetical protein TERM 1939 2069486 - 2069471 - g 74 -9 -3.85296 | opp_overlap 2069478, overlap 2069469 CCGACAACCAAAACA GTCAGC TTTT GCTGAC AAATGCCTTACAGGC Nham_1856 2069446 - 2069757 + | hypothetical protein Nham_1857 2070745 - 2069732 - | hypothetical protein TERM 1940 2070745 - 2070757 + r 78 -4.1 -4.87626 | TCATTGCCGCCGCCA TCTAG TCG CTGGA TTTTTCCTGTTCCAC Nham_1858 2071741 - 2070746 - | hypothetical protein Nham_1859 2074139 - 2071764 - | integrase catalytic subunit TERM 1941 2073800 - 2073826 + g 75 -3.7 -4.81212 | overlap 2073775 2073798 TGTTGTAGACCTTCC CGATCAACG CTCGTGTTT CGTCGATCG TTTTCTTCTCGTCGA Nham_1860 2074945 - 2074133 - | hypothetical protein TERM 1942 2075323 - 2075356 + r 100 -24.7 -3.63991 | opp_overlap 2075313 2075325 GAAGACTTTCGATAT GACGCGCGATCGGGG TCCG CTCCGATCGCGCGTC TTATTAGGGCTGCTG TERM 1943 2075354 - 2075325 - R 95 -19.3 -2.62735 | opp_overlap 2075323, overlap 2075313 AGACTTTCGATATGA CGCGCGATCGGGG TCCG CTCCGATCGCGCG TCTTATTAGGGCTGC TERM 1944 2075386 - 2075402 + r 71 -10.1 -3.57901 | overlap 2075385 2075387 GCATCACGTTCTCCT CGTCACG CCG CGTGGCG TATCTTTTTGATAAC TERM 1945 2075387 - 2075406 + r 73 -3.4 -4.72272 | overlap 2075386 2075385 CATCACGTTCTCCTC GTCACGCC GCGT GGCGTATC TTTTTGATAACACGC Nham_1861 2076523 - 2075582 - | phage integrase Nham_1862 2076554 - 2076841 + | hypothetical protein Nham_1863 2077355 - 2076807 - | hypothetical protein TERM 1946 2077048 - 2077001 - G 71 -5.7 -4.26903 | opp_overlap 2077008, overlap 2077022 CGCACGCGACGAAAA GT-CGGTATCCGGAGGAGAACAG CCGG CC-TTCTCCTCCGCATTCCATAC AGGTGCAGGCCGACC Nham_1864 2078400 - 2077708 - | hypothetical protein Nham_1865 2078668 - 2078859 + | hypothetical protein Nham_1866 2079431 - 2079219 - | putative transposase of insertion sequence ISRm2011-2, orfA protein Nham_1867 2080730 - 2079471 - | major facilitator transporter Nham_1868 2081528 - 2080740 - | hypothetical protein Nham_1869 2082615 - 2081551 - | hypothetical protein Nham_1870 2083554 - 2082664 - | protein of unknown function LppY and LpqO TERM 1947 2083847 - 2083826 - R 83 -5.7 -5.01497 | ACCAGGAGAGAAAAA CCCAGCCGG ATCC CCCGCCGAG CGCCTTGCCCATGGC Nham_1872 2084410 - 2084021 - | hypothetical protein TERM 1948 2085041 - 2085023 - H 70 -11.8 -2.83522 | opp_overlap 2085023, overlap 2085022 AGCGGGCCAGGAAAT CGAAATCG TCG CGATTTCG TGAATTGAGCCTCGA TERM 1949 2086576 - 2086550 - g 77 -2.2 -5.02476 | overlap 2086551 2086552 ACATCCGCCAAAAAA TTGGAATCCTCG ATT CGACGATTCGAC GATTCGGCTGTCGAT Nham_1875 2085490 - 2086617 + | Cys/Met metabolism pyridoxal-phosphate-dependent enzymes Nham_1876 2088860 - 2086680 - | hypothetical protein TERM 1950 2086727 - 2086746 + g 77 -4.3 -4.90013 | gap 1, overlap 2086714 CACGGTCAGCGTCCC GCACG-GA CCGTT TCTCGTGC TTTTTAGTTGCCTTC TERM 1951 2087478 - 2087461 - G 90 -2.7 -5.42259 | TGATCTTGAAAAAAA CGAAG GGTCTCGG CTTCG AACGCGTTGCCCTTG TERM 1952 2088834 - 2088848 + g 76 -10 -3.85698 | GACGAGCTTTTCCTT CAACCG CGG CGGTTG TTTCTGAGGCACCGC TERM 1953 2088856 - 2088878 + g 91 -5.5 -5.38497 | gap 1 GGCGGTTGTTTCTGA GGCACCGCGG ATTG CCCCG-TGCC TTTTTTCATTTCGCT TERM 1954 2090803 - 2090822 + r 84 -15 -2.90075 | opp_overlap 2090803 CATTGAAGTAAAAAA GCCGGCAC CCGA GTGCCGGC TCTGGTTCGAGGAAA TERM 1955 2090822 - 2090803 - R 100 -15 -5.28481 | opp_overlap 2090803 CATTGAAGTAAAAAA GCCGGCAC CCGA GTGCCGGC TCTGGTTCGAGGAAA Nham_1878 2092819 - 2091101 - | sulphate transporter Nham_1879 2094029 - 2093073 - | peptidase S1 and S6, chymotrypsin/Hap Nham_1880 2094212 - 2095084 + | PDZ/DHR/GLGF Nham_1881 2095120 - 2095719 + | LuxR family transcriptional regulator TERM 1956 2095729 - 2095748 + T 77 -13.6 -3.01712 | opp_overlap 2095729 GATTGAGTTCGAAGA GGGCTGCT AATC AGCAGCCC TCTTGCGGCCGGAGA TERM 1957 2095748 - 2095729 - T 79 -13.6 -3.04461 | opp_overlap 2095729 GATTGAGTTCGAAGA GGGCTGCT AATC AGCAGCCC TCTTGCGGCCGGAGA Nham_1882 2096283 - 2095735 - | cytochrome B561 TERM 1958 2096242 - 2096284 + g 95 -21.2 -3.17219 | overlap 2096236 2096244 GAATGGGTCCCAGAC CTTGACCGTGGCCGGCGGCG TCG CGCCGCCGGCTCCGATCATG TTGCTCACGGTTCTC TERM 1959 2096244 - 2096282 + g 100 -22.4 -3.14527 | overlap 2096242 2096236 ATGGGTCCCAGACCT TGACCGTGGCCGGCGGCG TCG CGCCGCCGGCTCCGATCA TGTTGCTCACGGTTC Nham_1883 2096584 - 2096312 - | hypothetical protein TERM 1960 2096929 - 2096901 - g 86 -13.1 -3.96892 | AATGGTCAGGAGAAA GCTTCCCGGCGAC GTC GTCGGCGTGAAGC TTGAACGGGAAGCCG Nham_1884 2096734 - 2097048 + | peptidase Nham_1885 2097048 - 2097713 + | two component transcriptional regulator Nham_1886 2097710 - 2099164 + | periplasmic sensor signal transduction histidine kinase TERM 1961 2099242 - 2099218 - g 70 -9.9 -3.55622 | GTCAAGCGCCTGAAA CGCGCGGAAGG CCA CCTTCGCCGCG TCATCGAGATGTTCG Nham_1887 2099161 - 2099445 + | hypothetical protein TERM 1962 2099794 - 2099761 - g 86 -16.1 -3.16055 | gap 1, overlap 2099750 TAAAGCTGTCAGGAA CCGTCGCCGA-GCTCC GCA GGAACATCGGCGACGA GGTCGAGAAGGGCGA Nham_1888 2099460 - 2100659 + | secretion protein HlyD TERM 1963 2101125 - 2101104 - g 76 -7.1 -4.4261 | opp_overlap 2101117, overlap 2101106 CGTCGAATACGAAAA GCCCGGCGC TATT GCGCCCGTC CGCGACGGCCAGCCC TERM 1964 2101246 - 2101295 + G 74 -10.5 -3.72893 | gap 1, opp_overlap 2101257 2101259 GATTGGATCGTCCGG CCGCAGATGAAGACGGTGCCCGGC GTG GCCGG-CGCCGACGCGATCGGCGG TTTCGTCAAGCAGTA TERM 1965 2103356 - 2103376 + G 76 -12.5 -3.40522 | TCGAAAACTTCTCAG TCGCGCGCC AGC GGCTCGCGA TTGTCGTCCCCGCAT Nham_1889 2100661 - 2103900 + | heavy metal efflux pump CzcA Nham_1890 2103987 - 2104442 + | hypothetical protein Nham_1893 2105481 - 2105807 + | hypothetical protein Nham_1894 2106028 - 2106540 + | hypothetical protein TERM 1966 2107002 - 2107033 + T 75 -10.8 -3.68324 | gap 1, opp_overlap 2107018, overlap 2107002 2107003 GGAAGTCTTTGCGGT CGGCGA-GGACAGCG AAG CGCCGTCCGTCGCCA TGTTTCTTCACGCTG TERM 1967 2107003 - 2107032 + T 80 -14.3 -2.80512 | gap 1, opp_overlap 2107018, overlap 2107002 2107002 GAAGTCTTTGCGGTC GGCGA-GGACAGCG AAG CGCCGTCCGTCGCC ATGTTTCTTCACGCT TERM 1968 2107569 - 2107587 + T 77 -11.7 -3.53444 | opp_overlap 2107555 2107553 2107552, overlap 2107556 ATGCCCCGGCGATGC CAGGCCC GCTCG GGGCCTG TTTCCCCAGGACTGG TERM 1969 2107601 - 2107630 + T 100 -10.6 -4.99435 | overlap 2107602 TGTTTCCCCAGGACT GGCCCGGCTGCC CTAATC GGCGGTCGGGCA TTTTTCGTTATTCGA TERM 1970 2107602 - 2107629 + T 88 -14.1 -3.58577 | overlap 2107601 GTTTCCCCAGGACTG GCCCGGCTGCC CTAATC GGCGGTCGGGC ATTTTTCGTTATTCG TERM 1971 2107663 - 2107680 + T 72 -4.8 -4.64495 | gap 1, opp_overlap 2107661 2107663, overlap 2107663 CGATGAATACGAATA CCCC-GC CATTC GCAGGGG TTGTTTTTATTGAAT Nham_1895 2109116 - 2107941 - | acetate kinase Nham_1896 2111570 - 2109162 - | putative phosphoketolase Nham_1897 2111828 - 2112523 + | signal-transduction protein Nham_1898 2114261 - 2112663 - | RNA-metabolising metallo-beta-lactamase TERM 1972 2113062 - 2113048 - G 70 -10 -3.62046 | GCATGTCCTGAATAA TCGTCG ATC CGACGA ATCCGCGCCGACACC Nham_1899 2115178 - 2114258 - | phosphoribosylpyrophosphate synthetase Nham_1900 2116767 - 2115175 - | thymidine phosphorylase Nham_1901 2116951 - 2118192 + | membrane protein Nham_1902 2119460 - 2118765 - | CBS domain-containing protein Nham_1903 2120333 - 2119776 - | nitroreductase Nham_1904 2120794 - 2120363 - | hypothetical protein Nham_1905 2121231 - 2120836 - | response regulator receiver domain-containing protein TERM 1973 2121335 - 2121315 - R 78 -8.9 -4.11484 | overlap 2121316 CTCAATCGTTCAAAA TGCCTGCGC GTA GCGCAAGCC GGATCAGCTCGGACA TERM 1974 2121334 - 2121316 - R 73 -12.4 -3.06569 | overlap 2121315 TCAATCGTTCAAAAT GCCTGCGC GTA GCGCAAGC CGGATCAGCTCGGAC fixJ 2121918 - 2121301 - | response regulator FixJ Nham_1907 2123392 - 2121908 - | PAS/PAC sensor signal transduction histidine kinase TERM 1975 2122717 - 2122691 - G 76 -8 -4.28713 | opp_overlap 2122693, overlap 2122683 2122701 AAGATCACGAACAAA TCCGGTAAAATG CCG CTTTCCACCGGA GTGCATCTCACCGAC Nham_1908 2123577 - 2123843 + | hypothetical protein Nham_1909 2124544 - 2123897 - | transport-associated Nham_1910 2125066 - 2124722 - | hypothetical protein Nham_1911 2125304 - 2125891 + | hypothetical protein Nham_1912 2126723 - 2125995 - | signal-transduction protein TERM 1976 2127102 - 2127123 + G 81 -7.2 -4.50159 | GTTGTTGGAATCGCG GCTGCGGA GTTCAG TCCGCCGC TTTATTTCACTTCGG Nham_1913 2126988 - 2127824 + | hypothetical protein Nham_1914 2128869 - 2127928 - | CHAD TERM 1977 2128260 - 2128270 + g 91 -4.6 -5.27923 | CATTCATATCCTCAA GGGC GCG GCTC TTTTTTATCAGCTTC Nham_1915 2130446 - 2128866 - | hypothetical protein Nham_1916 2131442 - 2130459 - | alcohol dehydrogenase GroES-like protein Nham_1917 2131612 - 2132082 + | heat shock protein Hsp20 Nham_1918 2132164 - 2132604 + | CBS domain-containing protein TERM 1978 2135030 - 2135076 + G 78 -10 -4.04319 | opp_overlap 2135030, overlap 2135034 TGTGTTGAAGGATAA TTGGCGGATCATGGTCCGGCCG ATC CGGCCTGACGACGAACCGTTGA TTTCTGACTTTCTGC TERM 1979 2135034 - 2135072 + G 77 -13 -3.63662 | opp_overlap 2135030, overlap 2135030 TTGAAGGATAATTGG CGGATCATGGTCCGGCCG ATC CGGCCTGACGACGAACCG TTGATTTCTGACTTT Nham_1919 2132808 - 2135501 + | GCN5-related N-acetyltransferase Nham_1920 2135928 - 2135527 - | hypothetical protein TERM 1980 2136705 - 2136716 + G 91 -3.6 -5.46698 | ATCGGCGCGATCATC GCTC AGCA GGGC TTTTTTCATTTTCGC Nham_1921 2136114 - 2137280 + | hypothetical protein TERM 1981 2137744 - 2137784 + G 80 -5.2 -4.82901 | gap 1, opp_overlap 2137741 2137742, overlap 2137747 2137748 2137749 TGGCATGACCAAGCG CGTGGCGCTGGCACGGGCG CTGG CGCTCGACCCGGCGAT-CG TTTTTCTCGACGAGC Nham_1922 2137283 - 2138062 + | ABC transporter related Nham_1923 2138066 - 2139175 + | hypothetical protein Nham_1924 2139604 - 2140071 + | hypothetical protein Nham_1925 2140533 - 2140207 - | hypothetical protein TERM 1982 2140435 - 2140425 - G 76 -8.2 -4.20367 | opp_overlap 2140425 CTGCGCAATAAAGAA GCGC CAA GCGC CGACCTTGCTCGGTG Nham_1926 2140714 - 2141547 + | hypothetical protein TERM 1983 2142733 - 2142774 + T 78 -11 -3.78934 | gap 2, overlap 2142734 ACGGGGTGACCTGTC TCGACGA-C-CTGCCGTTCG ATTT TGAACGGCGGCGATCGTCGG TTCTTGTGAAGCCGG TERM 1984 2142734 - 2142773 + T 71 -12.3 -2.87146 | gap 2, overlap 2142733 CGGGGTGACCTGTCT CGACGA-C-CTGCCGTTCG ATTT TGAACGGCGGCGATCGTCG GTTCTTGTGAAGCCG TERM 1985 2143651 - 2143663 + T 80 -10.5 -3.96291 | CATTCTGGCGTTAAC GCCGC TTG GCGGC TTTGTCGGGTTTGTA Nham_1928 2145018 - 2143906 - | zinc-binding alcohol dehydrogenase TERM 1986 2145762 - 2145789 + G 74 -5.6 -4.43213 | opp_overlap 2145763 2145767, overlap 2145763 2145767 AAATCCGGCCTCCAA AGAAGTTCCTTC CAAT GAAGGGATTTCG TTTTCGTCTCTTCGA TERM 1987 2145767 - 2145784 + G 73 -6.3 -4.25388 | opp_overlap 2145763 2145767, overlap 2145763 2145762 CGGCCTCCAAAGAAG TTCCTTC CAAT GAAGGGA TTTCGTTTTCGTCTC TERM 1988 2146109 - 2146134 + G 73 -12.6 -3.18582 | gap 1, opp_overlap 2146104 2146129 CCGTGGAACAGCTCG GCCCGCTTGCC GAGAA GGCA-GCGGGC TTACTCGCTGAACTC Nham_1929 2145742 - 2147784 + | protein-L-isoaspartate O-methyltransferase Nham_1930 2147844 - 2148299 + | hypothetical protein TERM 1989 2148714 - 2148687 - T 83 -12 -3.81951 | gap 1, opp_overlap 2148681 2148690, overlap 2148690 TCCGATACGATCAAA GCAGCGCG-ACCG CCA CGGTGCGCGCTTC GGTGACTTCGTATCC TERM 1990 2148690 - 2148711 + T 73 -12.3 -3.10409 | gap 1, opp_overlap 2148690 2148687, overlap 2148681 GATACGATCAAAGCA GCGCG-ACCG CCA CGGTGCGCGC TTCGGTGACTTCGTA TERM 1991 2148711 - 2148690 - T 71 -12.3 -2.99207 | gap 1, opp_overlap 2148681 2148690, overlap 2148687 GATACGATCAAAGCA GCGCG-ACCG CCA CGGTGCGCGC TTCGGTGACTTCGTA TERM 1992 2148945 - 2148935 - T 74 -2.4 -4.97158 | GCATAGGAAAGAAAA GCGG AGG CAGC GCAAACAGCACCGGC Nham_1933 2150273 - 2149587 - | CBS domain-containing protein Nham_1934 2150974 - 2151450 + | hypothetical protein Nham_1935 2152077 - 2152895 + | hypothetical protein Nham_1936 2153660 - 2153328 - | hypothetical protein Nham_1937 2154773 - 2153664 - | acyltransferase 3 Nham_1938 2156159 - 2154867 - | chromate transporter TERM 1993 2155268 - 2155232 - G 70 -12.2 -3.13382 | gap 1 CAGCAAAGGTGAATA GCGGGCC-CGGCACCGC CTGG GCGGCGCCATAGCCAGC AAGAAAGGCGTCGTC TERM 1994 2156037 - 2156021 - G 93 -8.7 -5.08601 | CGAGCTTAAGAAAAA TCCGGAG TAC CTCCAGA GGTGAACCGAGCCTC Nham_1939 2156321 - 2157445 + | transposase IS116/IS110/IS902 Nham_1940 2159138 - 2158893 - | hypothetical protein Nham_1941 2159350 - 2159904 + | cytochrome B561 Nham_1942 2160238 - 2160486 + | hypothetical protein Nham_1943 2160623 - 2160982 + | hypothetical protein Nham_1944 2161246 - 2160974 - | hypothetical protein Nham_1945 2161756 - 2161421 - | hypothetical protein TERM 1995 2161529 - 2161517 - G 82 -3.3 -5.1356 | overlap 2161518 2161519 TTCGAGCAAGAAAAA TGCGA GCT TCGCG GCATCGAAGTCGGGA TERM 1996 2161576 - 2161588 + g 73 -3.3 -4.77157 | overlap 2161566 CAAACGGCGGCGCGT CAGTC GTT GCCTG TTTTTGATCCGTTCC Nham_1947 2163162 - 2162482 - | signal-transduction protein TERM 1997 2163694 - 2163704 + H 71 -6.8 -4.18401 | CATCATTGCTCGCTG GACC GAC GGTC TTTTCGACTATCTCG TERM 1998 2164573 - 2164561 - g 74 -4.8 -4.62069 | CCTGTATTGGAAAAA GCAC AGCAG GTGC GGGTTGTGACCGTTT Nham_1948 2164015 - 2164854 + | hypothetical protein Nham_1949 2165460 - 2167316 + | heavy metal translocating P-type ATPase fixK 2168865 - 2168170 - | transcriptional regulator FixK TERM 1999 2169409 - 2169361 - g 72 -11.7 -3.28712 | gap 1, overlap 2169364 GCGGGCGTGTCAGAA GATCGCCAAGGCGCC-ACGATC TGTCCG GATCGCAGGCGCTGTGGCGGTC GTGCTCGCCACCGGC Nham_1952 2169287 - 2170093 + | hypothetical protein TERM 2000 2170088 - 2170113 + F 74 -12.7 -2.92098 | gap 1, overlap 2170085 2170081 2170090 GGCCATCAGCGTCTG GATTGAGCGGGT GGT ACCCGC-CAATC TGCTTGCTTTGCTTC Nham_1954 2170384 - 2171541 + | transposase IS116/IS110/IS902 Nham_1955 2172035 - 2171910 - | hypothetical protein Nham_1956 2173205 - 2173426 + | hypothetical protein Nham_1957 2173513 - 2173725 + | hypothetical protein Nham_1958 2173795 - 2174130 + | hypothetical protein TERM 2001 2174223 - 2174213 - f 83 -5.4 -4.93877 | CGCCACGAAACAAAA GGAA CCG TTCC CATGGAGAAGATTAT Nham_1959 2174225 - 2175256 + | transposase IS116/IS110/IS902 Nham_1960 2176776 - 2176480 - | hypothetical protein Nham_1961 2176838 - 2177320 + | Ion transport 2 TERM 2002 2177430 - 2177466 + F 74 -13.7 -2.54687 | gap 1, overlap 2177429 2177465 GTACTTTCGGCGCAG ACTCGCG-CCGGCGCG CCGAAT TGCGCCGGGCGCGAGA GTTCGTACTCATTCA TERM 2003 2177627 - 2177610 - f 79 -6.9 -4.63218 | overlap 2177611 TTCGTTGGAAGAAAA GGCCTGC GGTG GCAGGCT AACGGCAATAAGTCG Nham_1962 2177748 - 2178224 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Nham_1963 2178701 - 2178910 + | hypothetical protein Nham_1964 2178897 - 2179139 + | hypothetical protein TERM 2004 2179446 - 2179427 - g 83 -7.8 -4.62336 | opp_overlap 2179415 2179414, overlap 2179428 ATTGGACGGCAAAAA GGACGTCC GTTT GGACGTCT CAACGATTGGAAGTG Nham_1965 2179371 - 2179784 + | transposase IS3/IS911 TERM 2005 2179835 - 2179889 + F 100 -15.9 -4.59109 | gap 1, opp_overlap 2179835 2179839, overlap 2179841 TGACAAGTAACGGAA TCTACGTCGGAGTGGGGTCACGATCG GCGC TGATCCTGACCCCACTCCGAT-TGGC TTTTTCCCGACTGTC TERM 2006 2179886 - 2179839 - f 85 -17.1 -2.57757 | opp_overlap 2179835 2179841, overlap 2179835 AAGTAACGGAATCTA CGTCGGAGTGGGGTCACGATC GGCGCT GATCCTGACCCCACTCCGATT GGCTTTTTCCCGACT TERM 2007 2179841 - 2179884 + F 100 -24.8 -3.45031 | opp_overlap 2179839 2179835, overlap 2179835 GTAACGGAATCTACG TCGGAGTGGGGTCACGATCG GCGC TGATCCTGACCCCACTCCGA TTGGCTTTTTCCCGA Nham_1966 2180929 - 2181189 + | hypothetical protein Nham_1967 2181532 - 2181179 - | hypothetical protein Nham_1968 2181856 - 2182224 + | hypothetical protein Nham_1969 2182235 - 2182753 + | nuclease (SNase-like) TERM 2008 2185131 - 2185158 + T 72 -9.8 -3.66178 | gap 1 GCACGGCGAATATGC CAC-CGCGCTCGG CGA TCGTGCGCGAGTG TTTCGCATTCGGCCG TERM 2009 2185842 - 2185855 + T 75 -9.5 -3.85864 | CCTCCCTATCGGCGG GCGGC TGCA GCCGC TTCTTGTGGTGCTCG Nham_1972 2187579 - 2186791 - | hypothetical protein TERM 2010 2188387 - 2188372 - g 78 -11.8 -3.68988 | overlap 2188369 TCTCATTCAAGAGAA CGGGCG CCGC CGCCCG GATGTCCGCGCGATC Nham_1973 2187941 - 2189218 + | hypothetical protein TERM 2011 2189288 - 2189304 + F 71 -10.9 -3.22298 | opp_overlap 2189285 2189283 TGGAAGCGAAGAGAG TTCGCTG GGG CAGCGAA TTCGTAATGCCTGGG TERM 2012 2189923 - 2189908 - g 74 -4.7 -4.61868 | GACTTACAGACAAAA CAAGG CCTACC CCTTG TCGTGGATGCGGGGC TERM 2013 2190032 - 2190045 + G 86 -8.1 -4.65895 | overlap 2190029 CTGATCAGCAGCTCG GGTCG CCGC CGACC TTTTTGGCTGCGGCA TERM 2014 2190346 - 2190368 + G 73 -6.9 -4.36914 | overlap 2190347 2190348 GAGCCTTTCGAGTAC CTGGCGACG CAGGC CGTCGCCGA TTTTCTGGCAACGGA Nham_1974 2189338 - 2190807 + | hypothetical protein TERM 2015 2190986 - 2190969 - T 95 -14.1 -3.72051 | opp_overlap 2190969, overlap 2190949 TTCAACAATTTGAAA CCCGCCG TTTT CGGCGGG TTTTTGTTATTTCTC TERM 2016 2190969 - 2190986 + T 100 -14.1 -5.42164 | opp_overlap 2190949 2190969 TTCAACAATTTGAAA CCCGCCG TTTT CGGCGGG TTTTTGTTATTTCTC Nham_1975 2191840 - 2191568 - | hypothetical protein Nham_1976 2192881 - 2192168 - | hypothetical protein TERM 2017 2192474 - 2192452 - G 71 -12.6 -3.08464 | opp_overlap 2192441 GGACCAGGCACGCAA CTGGCCGCCG CCG CGGCAGCCGG ATGTGGCCGCTCTCG Nham_1977 2193266 - 2192904 - | hypothetical protein Nham_1978 2193623 - 2193309 - | hypothetical protein Nham_1979 2195116 - 2193623 - | AAA ATPase, central region TERM 2018 2194219 - 2194201 - G 71 -5.8 -4.30576 | CCGGCAGCACCAAAA GCTCGGCG ATC CGGCGCGC CAGGCGCGACTTGCC Nham_1980 2195852 - 2195193 - | hypothetical protein TERM 2019 2195598 - 2195569 - G 76 -7.1 -4.4648 | gap 1, overlap 2195570 2195571 ATGTCCAGCAGAAAA CGGCCGTCGTCGCG CTG CACGACAATGGC-G TCGAGCTCCATCTGC Nham_1981 2196709 - 2195864 - | metallophosphoesterase Nham_1982 2197685 - 2197146 - | hypothetical protein Nham_1983 2197732 - 2198085 + | hypothetical protein Nham_1984 2199851 - 2198640 - | hypothetical protein Nham_1985 2203307 - 2199957 - | type III restriction enzyme, res subunit TERM 2020 2200457 - 2200481 + g 86 -6.4 -5.03314 | gap 1, overlap 2200457 CTGCAACGAAGGCCT GG-ACCGAACG CGGC CGTTCGGAGCC TTTTTTCCAGATCGA TERM 2021 2203176 - 2203212 + g 76 -13.8 -3.20349 | opp_overlap 2203186, overlap 2203173 2203179 2203186 GCGGGCAGGGGCGAT TAGGCAGAAACGCCGG CCTAT CCGGTGTTTCTGCTGA TATTCGATTTCGGGC TERM 2022 2203179 - 2203209 + g 86 -17.7 -2.79248 | opp_overlap 2203186, overlap 2203176 2203173 2203186 GGCAGGGGCGATTAG GCAGAAACGCCGG CCTAT CCGGTGTTTCTGC TGATATTCGATTTCG TERM 2023 2203186 - 2203202 + g 70 -7.2 -4.01853 | opp_overlap 2203186, overlap 2203179 2203176 2203173 GCGATTAGGCAGAAA CGCCGG CCTAT CCGGTG TTTCTGCTGATATTC TERM 2024 2203971 - 2203951 - g 70 -13.3 -2.96274 | overlap 2203946 2203953 CGGCGTACAAGCAGA CAGGATCGG CTG CCGATCCCG TTCGGGCGGCAACGA Nham_1986 2203536 - 2204819 + | hypothetical protein Nham_1987 2204958 - 2205425 + | NUDIX hydrolase Nham_1988 2205422 - 2205844 + | hypothetical protein TERM 2025 2205911 - 2205863 - f 83 -13.8 -3.51032 | gap 1, overlap 2205864 ATTGGCCAACCATAA CCGGGCGAGCGTCAACCTGCCCG CTGA CCGGCATGC-GAAGCTCGCCCGA TCCCGCTATGGAGGA TERM 2026 2205910 - 2205864 - f 81 -15.1 -2.70298 | gap 1, overlap 2205863 TTGGCCAACCATAAC CGGGCGAGCGTCAACCTGCCCG CTGA CCGGCATGC-GAAGCTCGCCCG ATCCCGCTATGGAGG Nham_1990 2206419 - 2206766 + | hypothetical protein Nham_1991 2206842 - 2207231 + | hypothetical protein Nham_1992 2208180 - 2207710 - | hypothetical protein Nham_1993 2208327 - 2210432 + | helicase c2 TERM 2027 2212569 - 2212519 - g 72 -7.5 -4.18494 | gap 1 TATCGGTATGCAAAA CTGCGATCGATCATCATCGCC-GC AGCG ACTGGCGACGATGAAGGAGCGCCG AACGACGAGGCAAAG Nham_1994 2210995 - 2212767 + | ATP-dependent OLD family endonuclease Nham_1995 2212764 - 2214278 + | superfamily I DNA/RNA helicase-like protein Nham_1996 2214695 - 2217349 + | hypothetical protein Nham_1997 2217346 - 2220678 + | UvrD/REP helicase Nham_1998 2220922 - 2220689 - | hypothetical protein TERM 2028 2220904 - 2220892 - G 74 -4.8 -4.64766 | TGGAGACGGCAAAAA GCTG GCGGA CAGC GGGCTGGTTCGTGGT Nham_1999 2222232 - 2221204 - | transposase IS116/IS110/IS902 TERM 2029 2223396 - 2223414 + G 81 -16 -2.76189 | overlap 2223393 GCCCGACGTCTATCT CCGGACCG CGG CGGTCCGG TGCTTCGATAAATTC TERM 2030 2224303 - 2224317 + G 81 -10 -4.1552 | GATGGGACGGTCCAG CCTGAC GAG GTCAGG TTTCTTGAGAAGCTC Nham_2000 2222476 - 2224869 + | hypothetical protein TERM 2031 2225020 - 2225042 + GF 71 -11.3 -3.21099 | gap 1, overlap 2225020 ACGTCGACCGGATCG CC-GACGGCG GGGC CGCCGTCAGG TTCGTGATCGGCGAG Nham_2001 2224866 - 2226197 + | hypothetical protein TERM 2032 2227553 - 2227569 + GF 72 -2.1 -4.67982 | overlap 2227529 2227558 CGCTCTTCGATCTGC TGTGCGG TCC CGGCCCA TTTTCTTCGGTCGGA Nham_2002 2226166 - 2228406 + | DEAD/DEAH box helicase-like TERM 2033 2228934 - 2228920 - g 73 -6.4 -4.27584 | ACGGCCAATGGAAAA CGACGA CCT TCATCG GCGCGCTGCGACAGA Nham_2003 2228403 - 2229221 + | hypothetical protein TERM 2034 2229529 - 2229491 - T 70 -5.1 -4.46775 | opp_overlap 2229508, overlap 2229494 2229495 CACGGAAAATAGAAA CGAGGCCACCTTGAGCG TCCGT CGGCCAAGGAGGCATGG GGTTGAAACTTTCCT TERM 2035 2229938 - 2229909 - T 72 -6.5 -4.27483 | gap 1 AGTGACAAAATCAAA CGCGA-ACGACA GACCTCG TGCCGTGTCGCG GACTGACTGTGATAG Nham_2004 2230447 - 2230055 - | hypothetical protein Nham_2005 2230564 - 2232207 + | acyl-CoA synthetase Nham_2006 2233015 - 2232212 - | hypothetical protein Nham_2007 2233803 - 2233012 - | TatD-related deoxyribonuclease Nham_2008 2235797 - 2233818 - | methionyl-tRNA synthetase TERM 2036 2235424 - 2235465 + g 72 -4.3 -4.59773 | gap 1, overlap 2235426 CGACGTGACGTTGCG GACTTCGCCGGA-CGCTTTG CTG CGGATCGCTTCGGCGCAGCC TTTTTCGCAGTGACC TERM 2037 2235472 - 2235494 + g 77 -2.6 -5.08011 | GGCGCAGCCTTTTTC GCAGTGAC CTTGTTC GTCGCCGC TTTTTTCGGAATTTT Nham_2009 2236890 - 2235850 - | DNA polymerase III subunit delta' TERM 2038 2235907 - 2235891 - G 82 -3.6 -5.1615 | CGAACACCGAAAAAA CCAGCG GTTTT CGCTCG AGATTGTAGGTTTCC TERM 2039 2236313 - 2236286 - G 72 -13.4 -2.78384 | gap 1 GCCGCCCGGATCACA TCGC-CGGCGGCC AGC GGCCGCAGCGCGA GCTTGCGGCAGCGCG Nham_2010 2237579 - 2236887 - | thymidylate kinase Nham_2011 2238823 - 2237579 - | Serine-type D-Ala-D-Ala carboxypeptidase Nham_2012 2239878 - 2238940 - | rare lipoprotein A TERM 2040 2239247 - 2239237 - G 71 -8.2 -3.92373 | overlap 2239238 GAGTTCAGGCACAAA CGGC CGC GCCG ACGCGATCCTGACCG TERM 2041 2240823 - 2240836 + H 75 -3.8 -4.82901 | TAGAATCATCCTTCC GCCA CCGATC TGGC TTTTTGTAGAAAACC Nham_2014 2241144 - 2242394 + | phage integrase TERM 2042 2242421 - 2242391 - T 93 -17.6 -3.18264 | overlap 2242394 GGTCGGACCGAGGAA GTAGACCGGCACCC ATC GGATGCCGGTCTGC CGATCAATCCGTCAG TERM 2043 2242418 - 2242394 - T 89 -17.9 -2.79098 | overlap 2242391 CGGACCGAGGAAGTA GACCGGCACCC ATC GGATGCCGGTC TGCCGATCAATCCGT Nham_2015 2242853 - 2242440 - | hypothetical protein TERM 2044 2242470 - 2242494 + g 72 -4.2 -4.58395 | opp_overlap 2242466 ACCAACCAACACGCG TCCACCCGTC CGCGA GACTGGTCGA TTTTTGCGAACTGCA TERM 2045 2242878 - 2242919 + H 82 -8.8 -4.51378 | gap 2, overlap 2242881 2242883 CCTTTCGCGGGTTTG GTTAGGGCCGGACGCGAGGT CGCC ACCTTGC-TCCGGCC-TGTC TTTTCTGATATCAGT TERM 2046 2242881 - 2242917 + H 81 -11.6 -3.8637 | gap 1, overlap 2242878 2242883 TTCGCGGGTTTGGTT AGGGCCGGACGCGAGGT CGCC ACCTTGC-TCCGGCCTG TCTTTTCTGATATCA TERM 2047 2242883 - 2242915 + H 90 -16.4 -3.50905 | gap 1, overlap 2242881 2242878 CGCGGGTTTGGTTAG GGCCGGACGCGAGGT CGCC ACCTTGC-TCCGGCC TGTCTTTTCTGATAT Nham_2016 2243194 - 2243688 + | hypothetical protein Nham_2017 2243873 - 2244379 + | hypothetical protein Nham_2018 2244950 - 2244483 - | hypothetical protein Nham_2019 2245285 - 2244950 - | hypothetical protein Nham_2020 2246910 - 2245282 - | phage terminase TERM 2048 2245836 - 2245825 - G 71 -5.8 -4.30995 | CTGCGGACAAAAGAA GTGC GGCT GCAC GATGTAGTCGTCGCC Nham_2021 2247326 - 2246913 - | phage terminase, small subunit, putative, P27 Nham_2022 2247625 - 2247326 - | phage protein Nham_2023 2248364 - 2248011 - | HNH nuclease / phage phi-105 holin-like protein TERM 2049 2248547 - 2248512 - R 75 -9.6 -3.87869 | opp_overlap 2248516 CGAACCCCTTAGAAA CGGCGGGGGAATCCAC CGTC GCGGATTCCCCCTTGG TTGCGCGCGTTCAGC TERM 2050 2248516 - 2248543 + r 87 -15.6 -3.34192 | opp_overlap 2248512 CCCCTTAGAAACGGC GGGGGAATCCAC CGTC GCGGATTCCCCC TTGGTTGCGCGCGTT Nham_2024 2248976 - 2248590 - | hypothetical protein TERM 2051 2249028 - 2249005 - R 78 -8 -4.46775 | opp_overlap 2249006 2249007, overlap 2249006 2249007 2249009 TATTGAAAAGAGAAA GTGAGCGGGC CGAA GCCCGCTCGT TGATGGATTAGCTGG TERM 2052 2249027 - 2249006 - R 71 -11.5 -3.2698 | opp_overlap 2249006 2249007, overlap 2249005 2249007 2249009 ATTGAAAAGAGAAAG TGAGCGGGC CGAA GCCCGCTCG TTGATGGATTAGCTG TERM 2053 2249006 - 2249027 + r 82 -13.7 -3.22388 | opp_overlap 2249005 2249006 2249007 2249009, overlap 2249007 ATTGAAAAGAGAAAG TGAGCGGGC CGAA GCCCGCTCG TTGATGGATTAGCTG TERM 2054 2249007 - 2249026 + r 81 -15 -2.53112 | opp_overlap 2249006 2249005 2249007 2249009, overlap 2249006 TTGAAAAGAGAAAGT GAGCGGGC CGAA GCCCGCTC GTTGATGGATTAGCT TERM 2055 2249026 - 2249007 - R 81 -15 -2.55104 | opp_overlap 2249007 2249006, overlap 2249006 2249005 2249009 TTGAAAAGAGAAAGT GAGCGGGC CGAA GCCCGCTC GTTGATGGATTAGCT TERM 2056 2249024 - 2249009 - R 70 -11.8 -2.80021 | opp_overlap 2249007 2249006, overlap 2249007 2249006 2249005 GAAAAGAGAAAGTGA GCGGGC CGAA GCCCGC TCGTTGATGGATTAG Nham_2025 2250184 - 2249036 - | phage major capsid protein, HK97 TERM 2057 2250056 - 2250074 + g 78 -10.2 -4.011 | GCGCTTGGTCAGATC GGCAACCG GTG CGGTGGCC TTCTTTACGTCTTCC Nham_2026 2250725 - 2250192 - | peptidase U35, phage prohead HK97 Nham_2027 2251942 - 2250722 - | phage portal protein Nham_2028 2252407 - 2252141 - | hypothetical protein Nham_2029 2253282 - 2252386 - | hypothetical protein TERM 2058 2252670 - 2252648 - G 77 -4 -4.92783 | overlap 2252649 2252650 2252665 AACGCAGCAGAAAAA TCGTTGTCGC GCA GCAACGACGC GAGCAACATACGCGG Nham_2030 2254255 - 2253473 - | hypothetical protein Nham_2031 2256381 - 2254516 - | ATPase-like protein TERM 2059 2254656 - 2254710 + g 81 -10.1 -4.16842 | gap 2 CTAGGTCGCGCACCT TCGTC-CCCTTTGCGTCG-GGATGCTT CTG AATCATCCGCGGCGCATAGGACGGCGA TTTGTTCGGGCTGGG Nham_2032 2257831 - 2256557 - | hypothetical protein Nham_2033 2258034 - 2257828 - | phage transcriptional regulator, AlpA TERM 2060 2258354 - 2258366 + r 79 -6.9 -4.57569 | overlap 2258365 TGACGCGGGCGCTGC GGCCG TCC TGGCC TTTTTGCGAAGGTGC TERM 2061 2258459 - 2258437 - R 100 -14.1 -4.56775 | opp_overlap 2258437, overlap 2258424 2258423 ATTCCGGCGGAAAAA CCCGCCGGC TCATC ACCGGCGGG CTGGGATTTGGTCCT Nham_2034 2258760 - 2258557 - | cold-shock DNA-binding domain-containing protein TERM 2062 2258846 - 2258825 - R 83 -9.3 -4.4078 | opp_overlap 2258840 TTGCCGCAAGGAAAA CCTGCCGGC GCTA ACCGGCGGG CATCGTCGTTTTGAC Nham_2035 2259157 - 2258882 - | hypothetical protein Nham_2036 2259458 - 2259204 - | hypothetical protein Nham_2037 2259878 - 2260240 + | hypothetical protein TERM 2063 2261632 - 2261659 + F 87 -4 -5.47218 | gap 1, opp_overlap 2261610 2261620, overlap 2261612 2261635 GAACGGCTGCGCAAT CGTCGGTTGCGGC CGA GCAGCATTCG-CG TTTTTTTGACTACGC TERM 2064 2261936 - 2261894 - f 91 -5 -5.56264 | gap 3, opp_overlap 2261932, overlap 2261895 CGGAAAGACAAAAAA CCGCCATCTGCGCCTGGATAC ATGT GT-TCC-GATGCAGATGG-GG ACGGACGCGTCAACA Nham_2038 2262003 - 2262470 + | hypothetical protein TERM 2065 2262567 - 2262579 + T 72 -9.1 -3.86202 | opp_overlap 2262560 2262559 GGATGAACCTGGGCG CGTCG TCC CGACG TTTGATGTGGTCAAC Nham_2039 2263000 - 2262590 - | cupin 2, barrel TERM 2066 2262690 - 2262719 + g 79 -8.5 -4.36914 | gap 1, overlap 2262694 GCGATGTGGGTCATG GCGGTGGT-CGGCG CCG CGCCGTGCCAGTGC TTTTCTCCCGGGGGA TERM 2067 2263754 - 2263766 + G 75 -3.3 -4.85599 | TCCTGCTCGAACCGG GAGAC GCC GTCAC TTTTTATGCGGTCGA Nham_2040 2263123 - 2263854 + | hypothetical protein Nham_2041 2263851 - 2264888 + | allophanate hydrolase subunit 2 Nham_2042 2264922 - 2265689 + | hypothetical protein TERM 2068 2265709 - 2265690 - T 72 -8.6 -3.93658 | AAGACGGCGAAATAA TCCGTTCC GATC AGAACGGA TGGATCGACAGCGAA Nham_2043 2266118 - 2265864 - | hypothetical protein TERM 2069 2266019 - 2266059 + g 100 -14.1 -4.50859 | overlap 2266005 ATTTCGGCCGGCTCC GGCTGGAGTCTAATCCAAC TGC GTTGCATCGGACTTCAGCC TTTGTCTTTTGATTG TERM 2070 2266088 - 2266098 + g 84 -8.2 -4.4267 | TGAGCATGATCTTAT CCGG AAA CCGG TTTTCACTTTTCGGG Nham_2044 2267103 - 2266129 - | zinc-binding alcohol dehydrogenase TERM 2071 2266474 - 2266444 - G 70 -10.5 -3.56568 | gap 1 CAACGAGCCCGGAAA CGTGGTCT-TGCCG ACGC CGTCATAGACCACG TCGCACAACTCGTTG Nham_2045 2267918 - 2267193 - | integral membrane protein TerC Nham_2046 2268649 - 2267915 - | phosphatidylcholine synthase TERM 2072 2269168 - 2269138 - g 76 -7.4 -4.30441 | overlap 2269163 CTACAACATCGAAAA CCGCGCGCTGATGG TCG CCATGGAAGCGCGG GCCGCGGAAGCCGGG Nham_2047 2268749 - 2270026 + | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 2073 2270206 - 2270217 + G 72 -2.2 -4.81249 | overlap 2270214 AGATCGGCCAGATCG TTCG CCAC CGGA TTTTTCCGTTTCGGG Nham_2048 2270163 - 2270495 + | hemimethylated DNA-binding region TERM 2074 2270524 - 2270557 + T 85 -10.3 -4.4078 | opp_overlap 2270531, overlap 2270531 ACCGTTAATCGTCAA CAAAAAAGGCGCTTC GCAA GGAGCGCCTTCTTCG TTTTCCTTCCCGAAA TERM 2075 2270531 - 2270550 + T 85 -11.4 -3.9901 | opp_overlap 2270531, overlap 2270524 ATCGTCAACAAAAAA GGCGCTTC GCAA GGAGCGCC TTCTTCGTTTTCCTT TERM 2076 2270550 - 2270531 - T 100 -9.2 -5.45652 | opp_overlap 2270524 2270531 ATCGTCAACAAAAAA GGCGCTTC GCAA GGAGCGCC TTCTTCGTTTTCCTT Nham_2049 2271333 - 2270581 - | invasion associated locus B TERM 2077 2271155 - 2271189 + g 81 -9.8 -4.20918 | GGCGCTGCCGCCGGG GCCGCGGGCGCCTGTG CAG CATTCGGGCTCGCGGC TTTCTTGCCCTTGGA TERM 2078 2272596 - 2272620 + G 76 -11.3 -3.77832 | opp_overlap 2272571, overlap 2272598 GATGTTCTCCGACGT CCGCGTCCGCG AAG CGCTGACGCTG TTGTTCGATTTCGAG TERM 2079 2272598 - 2272618 + G 76 -12.5 -3.46873 | opp_overlap 2272571, overlap 2272596 TGTTCTCCGACGTCC GCGTCCGCG AAG CGCTGACGC TGTTGTTCGATTTCG Nham_2050 2271562 - 2273424 + | extracellular solute-binding protein TERM 2080 2274701 - 2274736 + G 81 -3.7 -5.00884 | overlap 2274696 ATCGCCATCACGGCC CCGCCGGCCGGCGTC ATGGCC GTCGGCGGCTACCGG TTTTTTGCACAGGAT Nham_2051 2273429 - 2274934 + | AMP-dependent synthetase and ligase Nham_2052 2275018 - 2276253 + | hypothetical protein Nham_2053 2279780 - 2276259 - | transcription-repair coupling factor TERM 2081 2279051 - 2279071 + g 77 -12.6 -3.64822 | opp_overlap 2279049 AAGCGGCGACATATC CCATCCGG AAACG CCGGATGG TTTCGGTGACGAACT Nham_2054 2280070 - 2279780 - | hypothetical protein TERM 2082 2280113 - 2280097 - H 82 -10.8 -4.19506 | ATCCGAACGCCAAAA GCCCGG ACGAG CCGGGC CGGCACCATATAGCC TERM 2083 2281254 - 2281278 + G 71 -12.7 -3.07043 | opp_overlap 2281243 2281239 TCAAGACCGTCGCAC CGCTGGCCGAC CGG GCCGGCCTGCG TGTTGCGATCCTGAC Nham_2055 2280230 - 2282329 + | DEAD/DEAH box helicase-like Nham_2056 2283103 - 2282333 - | hypothetical protein Nham_2057 2285033 - 2283207 - | D-fructose-6-phosphate amidotransferase Nham_2058 2285329 - 2285039 - | hypothetical protein Nham_2059 2285384 - 2285578 + | hypothetical protein Nham_2060 2286189 - 2286839 + | hypothetical protein Nham_2062 2287915 - 2287199 - | hypothetical protein Nham_2063 2291087 - 2287989 - | acriflavin resistance protein TERM 2084 2289403 - 2289374 - G 70 -7.2 -4.08485 | gap 2, overlap 2289369 2289375 TGGACTGAAAGGAAA CG-TCGGC-CGACG CTCG CGTCGAGCCGATCA CGAAGCCGCTGTCGT TERM 2085 2291058 - 2291022 - G 70 -7.9 -3.96624 | overlap 2291024 CACTCCGATCAGAAA CAGGCCGATCGCCAGCA ACG TGGTACCGACCGGCCTT CGGATGAACGGCTCG TERM 2086 2291056 - 2291024 - G 70 -10.5 -3.57406 | overlap 2291022 CTCCGATCAGAAACA GGCCGATCGCCAGCA ACG TGGTACCGACCGGCC TTCGGATGAACGGCT Nham_2064 2294215 - 2291087 - | acriflavin resistance protein TERM 2087 2291320 - 2291264 - G 73 -11.4 -3.66654 | gap 1, opp_overlap 2291274 2291291, overlap 2291265 GATGCCAAGGGGAAA TCGCAGTTCCGCGCCGGTGCCGCTTTC GATC GCCAGCGGCAGCG-CGCCGAACAGCGC CGCCAGCGTGGTCAT TERM 2088 2291319 - 2291265 - G 75 -14.9 -2.79671 | gap 1, opp_overlap 2291274 2291291, overlap 2291264 ATGCCAAGGGGAAAT CGCAGTTCCGCGCCGGTGCCGCTTTC GATC GCCAGCGGCAGCG-CGCCGAACAGCG CCGCCAGCGTGGTCA Nham_2065 2295645 - 2294281 - | secretion protein HlyD TERM 2089 2294370 - 2294400 + g 100 -20.4 -3.81741 | CCTCGTCCCGCTTGC CGCGGCGCTCGCCG CCT TGACGAGCGCCGCG TTTACCTTGTCGCTT Nham_2066 2297119 - 2295635 - | RND efflux system, outer membrane lipoprotein, NodT TERM 2090 2296071 - 2296055 - G 72 -2.1 -4.70659 | overlap 2296057 GGCGAGACTGAAAAA TGCGGCC TGG GGCTGGA ACAGCGCGACCAGGG TERM 2091 2296151 - 2296136 - G 76 -6 -4.57341 | overlap 2296138 AATGCTCGGGAAAAA CTGCGC GCGC GCGCTG CCCACGTTCGCGGTA Nham_2067 2297711 - 2298751 + | cysteine synthase A Nham_2068 2299510 - 2298767 - | ABC transporter related TERM 2092 2299293 - 2299249 - G 70 -7.8 -4.09739 | gap 1 TGAAGCTCTGGAAAA CCATTCCGACCTCGCGTCGAA CCTC CTCGACGCGCCG-CAGATTGG GACCAAGTTCGATCC Nham_2069 2301045 - 2299525 - | amino acid ABC transporter permease Nham_2070 2302247 - 2301042 - | amino acid ABC transporter permease Nham_2071 2303303 - 2302269 - | extracellular solute-binding protein TERM 2093 2303350 - 2303379 + H 73 -3.4 -4.73614 | TCAGTTCGTTGCCGT TCGGACGCTCGG TTGAGT CCGGTCGATCGA TTTGTTTTCCTCCTC Nham_2072 2303646 - 2304842 + | cystathionine beta-lyase Nham_2073 2304981 - 2306672 + | Na/Pi cotransporter II-related Nham_2074 2307008 - 2306685 - | lipid A biosynthesis-like Nham_2075 2307762 - 2307001 - | glycosyl transferase family protein Nham_2076 2309824 - 2308082 - | glycosyl transferase family protein Nham_2077 2311995 - 2309875 - | penicillin-binding protein 1C TERM 2094 2310304 - 2310282 - G 75 -4 -4.69656 | overlap 2310283 2310284 AAGCATCGAACAAAA CCGGCGCG GCTGCCA CACGCCCG ACCAGACCCGGCACC TERM 2095 2310441 - 2310422 - G 71 -11.4 -3.53012 | opp_overlap 2310421 2310422 2310438 GTGCCGGTCTTGAAA GCGATCCG GTTC CGGACCGC GTTTTCCGGCGGTGG Nham_2078 2317208 - 2311992 - | alpha-2-macroglobulin-like TERM 2096 2312515 - 2312483 - G 70 -13.3 -2.94144 | opp_overlap 2312483 2312481 2312492 2312511, overlap 2312480 CGGCCACGGAAATCA CCGCCTGCACCGGCG CAT CGCCGGTATTGGCGA TCTTGATCGGCTTGT TERM 2097 2312492 - 2312506 + g 71 -12.8 -3.06315 | opp_overlap 2312483 2312480, overlap 2312483 2312481 AAATCACCGCCTGCA CCGGCG CAT CGCCGG TATTGGCGATCTTGA TERM 2098 2314734 - 2314775 + g 84 -13.7 -3.76492 | overlap 2314706 2314727 GAGTTCGATCCGCGC CGGCTTGTTGGCGGCAATC GTGA GATCGCCGTCGGCAACCCG TTTGGTCGACTTCAC TERM 2099 2317641 - 2317687 + r 100 -20.3 -3.11634 | GGTTACCAGTGGGGT TTTGACATTCGCGGCCGGGGT GCGCG GCCCGGGTCGCGAATGTCGAA TTCACTCCTCTAGAA Nham_2079 2318188 - 2317697 - | single-strand DNA-binding protein Nham_2080 2318586 - 2319341 + | putative outer-membrane protein precursor TERM 2100 2319379 - 2319399 + F 100 -14.7 -5.27335 | opp_overlap 2319379 TCGGAAACTACGGAA GGCCGGCTT TTT GAGCCGGCC TTTTTGTTTGAGCAC TERM 2101 2319399 - 2319379 - f 79 -14 -3.1634 | opp_overlap 2319379 TCGGAAACTACGGAA GGCCGGCT TTTTG AGCCGGCC TTTTTGTTTGAGCAC TERM 2102 2319799 - 2319841 + G 71 -11.2 -3.50572 | CCGGCTCCGGCAAGT CGTCGCTGGCGTTCGACA CCATCTA TGCCGAGGGCCAGCGCCG TTATGTCGAGTCGCT TERM 2103 2320021 - 2320040 + G 71 -12.8 -3.01712 | opp_overlap 2320009 ACATGCGGCTGCTGT GGGCGCGC GTTG GCGTGCCC TATTCGCCCGCAACC TERM 2104 2320523 - 2320509 - g 93 -2.8 -5.58179 | GACGAGAAGAAAAAA GTGG CAAAAAT CCAC GACAAGAGCGGGCCC TERM 2105 2320602 - 2320613 + G 74 -5.8 -4.41047 | opp_overlap 2320601 ACCCTTCCCGAAATC GAGC CCCG GCTC TTTTCGTTCAACAAT TERM 2106 2322657 - 2322647 - g 71 -8.2 -3.84284 | GGAAAAGGCAGGAAA GCCG AAG CGGC GAGATGCCAGCGAGG uvrA 2319642 - 2322683 + | excinuclease ABC subunit A Nham_2082 2323016 - 2323534 + | hypothetical protein TERM 2107 2323582 - 2323605 + G 100 -13.9 -4.53419 | opp_overlap 2323581 2323578 2323577 TGCCCTCAAATCCAG GAGCGGTGC CTTTGC GCACCGCTC TTTGTTATTATGCTC TERM 2108 2323699 - 2323670 - g 76 -5.5 -4.60041 | opp_overlap 2323686, overlap 2323671 2323693 2323694 AGTTATTTTGAAAAA TCCGGCGGAATCG GCCG CGACAACGCCGGG AGAGCGCTGCCGCTC Nham_2083 2323538 - 2323798 + | hypothetical protein TERM 2109 2325381 - 2325365 - g 74 -9.3 -3.8969 | CGATCCAGAGAAGAA CCCGGCG CTG CGCCGCG AGATCAAGCTGGCGC TERM 2110 2327015 - 2327040 + G 71 -4.7 -4.46212 | gap 1, opp_overlap 2327009, overlap 2327018 GCCGAATGACGCCAC GGT-GGACGACT GCA AGTCGGCCTATC TTTTGTCCTGGAAGC Nham_2084 2324343 - 2328134 + | ribonucleotide-diphosphate reductase subunit alpha TERM 2111 2328260 - 2328220 - f 73 -12 -3.16068 | gap 1, opp_overlap 2328225, overlap 2328225 GGGGTAAGTGAAAAG CAAAATGGCTCGACGC-GA ACAA TCAGCGGCGAGCCATTTTT GATTCAACCGGGGCT TERM 2112 2328225 - 2328255 + F 100 -11.9 -4.8622 | gap 1, opp_overlap 2328225 2328220 AAGTGAAAAGCAAAA TGGCTCGACGC-GA ACAA TCAGCGGCGAGCCA TTTTTGATTCAACCG TERM 2113 2328255 - 2328225 - f 100 -11.9 -4.69549 | gap 1, opp_overlap 2328225, overlap 2328220 AAGTGAAAAGCAAAA TGGCTCGACGC-GA ACAA TCAGCGGCGAGCCA TTTTTGATTCAACCG Nham_2085 2328306 - 2328962 + | hypothetical protein Nham_2086 2329047 - 2329922 + | hypothetical protein TERM 2114 2329937 - 2329926 - f 76 -7.2 -4.45664 | overlap 2329901 2329927 2329928 CCAACGGAATGAAAA GCGC CGGC GCGC TGCGCAAGGATTCGC TERM 2115 2330008 - 2330038 + F 80 -14.8 -2.77899 | overlap 2330026 TTCTTTTTCTGAATT TTCCCTGGGACTCT TGC AGGGTTCCGGGGAA TCCTTCGTCCCGAGG TERM 2116 2330104 - 2330134 + F 88 -16.2 -3.07816 | opp_overlap 2330104, overlap 2330107 TAGCCCAAACGAAAA CAAGCGGCCTCGTT AGC AGCGAGACCGCTTG TTCGCTGGATCGAAG TERM 2117 2330134 - 2330104 - f 100 -16.2 -4.55798 | opp_overlap 2330104 2330107 TAGCCCAAACGAAAA CAAGCGGCCTCGTT AGC AGCGAGACCGCTTG TTCGCTGGATCGAAG TERM 2118 2330107 - 2330131 + F 81 -12.1 -3.68569 | opp_overlap 2330104, overlap 2330104 CCCAAACGAAAACAA GCGGCCTCGTT AGC AGCGAGACCGC TTGTTCGCTGGATCG Nham_2087 2330317 - 2331039 + | hypothetical protein Nham_2088 2331046 - 2333295 + | hypothetical protein Nham_2089 2333292 - 2334362 + | hypothetical protein TERM 2119 2335071 - 2335083 + G 70 -10.5 -3.58343 | opp_overlap 2335062 ATGAGAGGCGCTGCG CCGGC GCC GCCGG TTTCGACATCCTGAA Nham_2090 2334359 - 2336215 + | hypothetical protein TERM 2120 2336933 - 2336949 + G 73 -6.5 -4.30576 | opp_overlap 2336936 TGTCGAGTACGGTAA CGAGGAA AAC TCCCTCG TTTTGATCCTGACCC Nham_2091 2336238 - 2337020 + | hypothetical protein Nham_2092 2337081 - 2337830 + | hypothetical protein TERM 2121 2338078 - 2338020 - T 100 -22.9 -2.86164 | gap 3, opp_overlap 2338022, overlap 2338022 GCTTTAACGAGGAGA TAGGGGACGTTTTATGCCCGTCGCCGCA TGCGGC TGCGGCGACGGGCATAAAACGTCCC--- CTGATTAAACGCCCT TERM 2122 2338022 - 2338079 + T 100 -43.2 -2.71144 | opp_overlap 2338020 2338022 TTTAACGAGGAGATA GGGGACGTTTTATGCCCGTCGCCGCA TGCGGC TGCGGCGACGGGCATAAAACGTCCCC TGATTAAACGCCCTC TERM 2123 2338079 - 2338022 - T 100 -43.2 -2.98015 | opp_overlap 2338022, overlap 2338020 TTTAACGAGGAGATA GGGGACGTTTTATGCCCGTCGCCGCA TGCGGC TGCGGCGACGGGCATAAAACGTCCCC TGATTAAACGCCCTC TERM 2124 2338112 - 2338141 + T 87 -16.5 -2.72511 | opp_overlap 2338117, overlap 2338117 CTTTCGTAGGGCACA AAAAACCCCGCCG GCGA CGGCGGGGTTTTC CTTTGGGACGATGCG TERM 2125 2338136 - 2338117 - T 100 -16.4 -5.26316 | opp_overlap 2338117 2338112 GTAGGGCACAAAAAA CCCCGCCG GCGA CGGCGGGG TTTTCCTTTGGGACG TERM 2126 2338117 - 2338136 + T 100 -16.4 -4.54727 | opp_overlap 2338117, overlap 2338112 GTAGGGCACAAAAAA CCCCGCCG GCGA CGGCGGGG TTTTCCTTTGGGACG Nham_2093 2338311 - 2338177 - | hypothetical protein TERM 2127 2338432 - 2338419 - g 79 -8.1 -4.25848 | overlap 2338406 AATGCTCGACGAAAA CTGCG TCGT CGCAG TGTCGAGTCGCAAGC Nham_2094 2338357 - 2339139 + | hypothetical protein TERM 2128 2339302 - 2339334 + F 76 -13.5 -2.78018 | overlap 2339299 TTGCCCGGCGCCGCA GTGGAGCAGCTAACT CTT AATCAGCTGCTCCAC TCATTGATGACACAT Nham_2095 2339452 - 2340588 + | hypothetical protein Nham_2096 2341016 - 2340618 - | hypothetical protein TERM 2129 2341055 - 2341023 - R 70 -11.9 -2.78679 | opp_overlap 2341021, overlap 2341022 2341026 CTGGGCCATTCAAAT CCAGGCGAACGCGCG CGC CGCGCCCTCACCTGC GGATATGCTCAAGCG Nham_2097 2341263 - 2341048 - | hypothetical protein Nham_2098 2341979 - 2341290 - | polyphosphate glucokinase TERM 2130 2341743 - 2341713 - G 72 -11.9 -3.27525 | overlap 2341708 CTTCTGGAAATCGAA GCCCTTCCATCCC TCGCC GAGATTGAAGGGC TCGTGCAGCGGACGA TERM 2131 2341851 - 2341880 + g 76 -10.7 -3.75437 | overlap 2341861 CACCATCTGCTTCGC CGCGAGATCGGGT CCGG ATTCGAACTCGCG TTTGATGCGGTCCTT TERM 2132 2342703 - 2342656 - g 76 -13.5 -3.21726 | gap 1, overlap 2342658 2342667 CCGGAGAAGATCGAA TACG-CCATCAACCGCTTCGCC ATGGA GACGAAGCGGCAGATGGACGTG CTGGACCGCCGGCTC TERM 2133 2342701 - 2342658 - g 86 -16.1 -3.16961 | gap 1, overlap 2342656 2342667 GGAGAAGATCGAATA CG-CCATCAACCGCTTCGCC ATGGA GACGAAGCGGCAGATGGACG TGCTGGACCGCCGGC TERM 2134 2342691 - 2342667 - g 76 -13.6 -3.18735 | overlap 2342658 2342656 CGAATACGCCATCAA CCGCTTCGCC ATGGA GACGAAGCGG CAGATGGACGTGCTG Nham_2099 2342140 - 2343012 + | putative glutathione S-transferase YghU fabG 2343059 - 2343739 + | 3-ketoacyl-(acyl-carrier-protein) reductase Nham_2101 2343884 - 2344426 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase Nham_2102 2344464 - 2345138 + | hypothetical protein TERM 2135 2345379 - 2345355 - f 72 -8.5 -3.89346 | opp_overlap 2345361, overlap 2345365 2345366 2345369 GGTGTACGGGACAAA GGCGAACGAAG CGA CGTCGTTCGTC GAACGGCTGTGACGC TERM 2136 2345658 - 2345633 - g 76 -8.1 -4.1822 | opp_overlap 2345644 GCTGAGGTCAAGAAA GCCGCCCGCAC CGTT GCGCGGTCGCC AACCACGCGCGTGAT Nham_2103 2345456 - 2345755 + | hypothetical protein Nham_2104 2345845 - 2346090 + | hypothetical protein Nham_2105 2346698 - 2346135 - | CreA TERM 2137 2346332 - 2346360 + g 87 -5.9 -5.15969 | overlap 2346334 ACAGCGAGCGCCTTT GCTGGAACATGTC CCC GCCCTGTTCCATC TTTTTTCCCTTGAAA TERM 2138 2347792 - 2347779 - g 77 -2.3 -4.96762 | overlap 2347780 2347782 2347783 TACAGACTACAAAAA GGACG CCGA CGTCA CGGCAGCAACAGGCG TERM 2139 2348336 - 2348312 - g 79 -8.6 -4.30844 | gap 1 ACGTCATGACGAAAA TCGCCGACTCG CTTT CGA-CCGGCGA CTCCATCGTCGTGTC Nham_2106 2346904 - 2348415 + | hypothetical protein TERM 2140 2348524 - 2348505 - f 75 -4.2 -4.8143 | gap 1, overlap 2348506 CGAAGAACGGAAAAA GCGCGGGTG ATT CAAC-GCGC GACAACCTCTGAGGT Nham_2107 2348547 - 2349479 + | polysaccharide deacetylase Nham_2108 2349503 - 2350054 + | hypothetical protein TERM 2141 2350033 - 2350056 + T 75 -8.9 -4.07568 | gap 1, opp_overlap 2350021 CGACGTTCGCGTCAC CGC-ATGGCG CCGTA CGCCATAGCG TTTTCGAGCGAAGCA TERM 2142 2350133 - 2350145 + T 76 -6.9 -4.46112 | opp_overlap 2350133 CGCGTCAAAACAAAA GCTGG AGC CCGGC TTTGTTTCCATCAAA TERM 2143 2350145 - 2350133 - T 83 -4.7 -5.07652 | opp_overlap 2350133 CGCGTCAAAACAAAA GCTGG AGC CCGGC TTTGTTTCCATCAAA Nham_2109 2350633 - 2350181 - | DoxX TERM 2144 2350400 - 2350380 - G 93 -9.7 -4.7261 | ACCCACGAAAAGAAA CGCGCTC CGAGGTT GAGCGCG ATGAAGACGCCGCAG Nham_2110 2353041 - 2350744 - | malic enzyme aspS 2354916 - 2353144 - | aspartyl-tRNA synthetase TERM 2145 2353305 - 2353342 + g 78 -14.2 -3.01712 | opp_overlap 2353287 GCATGACGACGCGAT CGACGC-CCGCCGCCATG CCGC CATG-CGGCGGCGCGCCG TATTGAAACGCGCGG Nham_2112 2355097 - 2356287 + | ribonuclease D Nham_2113 2357048 - 2356389 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 2146 2357009 - 2356984 - G 72 -3.9 -4.64844 | gap 1, opp_overlap 2356983 2356987 GCGATATAGAGAAAA TCGCGCCG-GGT CGG ACTGCGGCCCGA AGGTTTTTTGATCTG Nham_2114 2358714 - 2357203 - | Ppx/GppA phosphatase TERM 2147 2357640 - 2357671 + g 70 -10 -3.60296 | opp_overlap 2357630 2357631 GACAAGCGGCGTGAC GCAGCCGGCGATCG TCTT TGGTCTCCGGCAGC TTTGCGATCCGGATC Nham_2115 2360947 - 2358722 - | polyphosphate kinase Nham_2116 2361743 - 2361063 - | hypothetical protein Nham_2117 2362337 - 2361795 - | CDP-alcohol phosphatidyltransferase TERM 2148 2362540 - 2362576 + G 75 -14.4 -2.74012 | gap 1, opp_overlap 2362527 2362528 AACGGCCTTACCTAT GCC-GATGCAGGCGTCG ATAT CGACGCCGGCAACCGGC TGGTTGACCTCATCA Nham_2118 2362510 - 2363580 + | phosphoribosylaminoimidazole synthetase TERM 2149 2364092 - 2364143 + G 72 -11.7 -3.30124 | gap 3, opp_overlap 2364078 ACGGCAGAGACGCTG GCCGCG-CGCGTGCTGG-AGAT-CGA GCA TCGCATCTACCCGGACGCGTTGCGGC TTGTCGCAAGTGGCG Nham_2119 2363591 - 2364241 + | phosphoribosylglycinamide formyltransferase TERM 2150 2364291 - 2364269 - T 73 -12.7 -2.74443 | overlap 2364268 2364264 CGGACAAGAACGAAT TCCCCCGGC TTGCG ACCGGGGGA GCGCACGTTACAACG Nham_2120 2364538 - 2364335 - | cold-shock DNA-binding domain-containing protein TERM 2151 2364596 - 2364567 - R 91 -7.1 -5.24129 | gap 1, opp_overlap 2364569, overlap 2364570 TCTGGGTATAAAAAA GACGCGGCCACGCA TCT CGCGT-ACCACGCC ACAAGCGGGCCTCCT Nham_2121 2365719 - 2364898 - | hypothetical protein TERM 2152 2365009 - 2364981 - G 83 -8 -4.54047 | overlap 2364982 2364983 GCACGGCACAGAAAA TCTCGCCCCCGG TTCCG CCGGCGGCGAAT TGCGGCGCGATGCCG TERM 2153 2365837 - 2365811 - R 73 -12.4 -3.02166 | opp_overlap 2365810 2365809 2365803 2365802 2365811 GTTGGAATCAAAGGA CCACTAGTAACT ATT AGTTTCTAGTGG AGTTTTGAATTTGAC Nham_2122 2366328 - 2365906 - | nucleoside-diphosphate kinase TERM 2154 2366867 - 2366828 - g 83 -12 -4.08064 | gap 1, overlap 2366816 2366815 2366829 AAGGCCGCGCGAAAA GCCCGCGAGGCAGAGGCCG CTG CGGCCGCCGCCGCACAG-C TCGCCCGGGAGAAAG TERM 2155 2366904 - 2366888 - g 72 -7.9 -4.15703 | overlap 2366889 CGGGAGAAAGAAGAA GCCGCAG CCG CTGAGGC CGCGCTCGAGGCCGA Nham_2123 2366627 - 2366974 + | hypothetical protein Nham_2124 2369133 - 2367133 - | carbamoyl-phosphate synthase L chain, ATP-binding TERM 2156 2368877 - 2368861 - G 74 -2.3 -4.83169 | opp_overlap 2368861 2368870 2368870 ATTCTCGGACAAAAA TCCAT AGCCGGG ATGGA TGCCTTCCGCGCCGG Nham_2125 2370779 - 2369136 - | propionyl-CoA carboxylase TERM 2157 2370590 - 2370647 + g 86 -18.3 -2.57881 | gap 1, overlap 2370591 2370640 GGGCCAGCATCTTGC CGCGCGAGGTATGGCGGGCGCGCGCGGT CTC GCCGCCTCCGCCCGCCACGC-TCGCGAG CTTGTCGCGCAGTTC TERM 2158 2370591 - 2370648 + g 77 -13.9 -3.30159 | gap 1, overlap 2370590 2370640 GGCCAGCATCTTGCC GCGCGAG-GTATGGCGGGCGCGCGCGGT CTC GCCGCCTCCGCCCGCCACGCTCGCGAGC TTGTCGCGCAGTTCG Nham_2126 2371362 - 2371054 - | ETC complex I subunit region TERM 2159 2371316 - 2371330 + g 72 -4.2 -4.58283 | overlap 2371298 2371318 CGGGTCATGGCGACC CCCGAT TGC ATCGCG TTTTTGGCGGGCTTG TERM 2160 2371394 - 2371418 + r 75 -5.6 -4.56775 | CTGCTGTGCGGGCTT GCGCCGATCT GGTAA AAACCGGCGC TTTTTCCGAAAAACT Nham_2127 2373379 - 2371568 - | carbamoyltransferase TERM 2161 2372816 - 2372804 - G 76 -6.2 -4.56597 | opp_overlap 2372809 CTCGTCGCTGAAAAA GCCG CGGTC CGGC TCCATCCAGACCTTC Nham_2128 2373449 - 2374180 + | hypothetical protein TERM 2162 2374211 - 2374238 + T 100 -20.6 -3.68988 | opp_overlap 2374211 TTCGCAAGCATTAAA GGGGTGCGCCGG TTCG CTGGCGCACCCC TTCTCTTGGATGGGA TERM 2163 2374238 - 2374211 - T 100 -18.4 -3.84246 | opp_overlap 2374211 TTCGCAAGCATTAAA GGGGTGCGCCGG TTCG CTGGCGCACCCC TTCTCTTGGATGGGA Nham_2129 2374918 - 2374499 - | hypothetical protein TERM 2164 2375153 - 2375137 - H 70 -4.5 -4.41047 | opp_overlap 2375137 ATGCTTCAACCAAAA TATTAAC AAT GTCAATA TCGTTTGATTTTTCA TERM 2165 2376360 - 2376346 - g 93 -3.5 -5.55769 | GTCGATAAGAAAAAA CGGAC GGTCT ATCCG TGGTCCGGTGACGAA Nham_2130 2375272 - 2376963 + | phage integrase Nham_2131 2377505 - 2376966 - | hypothetical protein TERM 2166 2377527 - 2377542 + r 70 -11.8 -2.78216 | CCCCGTCTAGCTTCC CGGCGG TCAA CCGCCG TACTTGATCCGCGTG Nham_2132 2377967 - 2377533 - | hypothetical protein TERM 2167 2378177 - 2378158 - R 100 -7.8 -5.7946 | opp_overlap 2378156 2378158 GGGGCAACAAAAAAA GGCGCG GTATAATT CGCGCC TCTTTGTGTCCTATG TERM 2168 2378506 - 2378490 - R 72 -5 -4.66609 | CAGGCCATCGAAAAA GCGGCG CTGGT CGTCGC TCCAATACTCTGACG Nham_2133 2378849 - 2378523 - | hypothetical protein Nham_2134 2379224 - 2378877 - | hypothetical protein Nham_2135 2379677 - 2379339 - | transposase Nham_2136 2380093 - 2379725 - | IS5 family transposase OrfA Nham_2137 2380376 - 2380122 - | hypothetical protein TERM 2169 2380426 - 2380401 - R 88 -13.5 -3.73122 | overlap 2380424 TATAATAATTTCAAA TGCTTAAGTCA GAAC TGACTTAAGCA AGCTGCCCCGCATGA Nham_2138 2381267 - 2380404 - | hypothetical protein TERM 2170 2381076 - 2381095 + g 72 -2.1 -4.75404 | AACAGCCGTTTGGGG TGCGG GACAAAAAGA CCGCA TTTTTGCTAGGGTTT Nham_2140 2382388 - 2381960 - | hypothetical protein TERM 2171 2382556 - 2382527 - R 78 -8.5 -4.24404 | ATCGAAACTTGAAAA GGTCGCGTAACGA TATT CCGTTTCGTGACC CTGAACTGTAACTAT Nham_2141 2383521 - 2382964 - | hypothetical protein Nham_2142 2384277 - 2383624 - | cold-shock DNA-binding domain-containing protein Nham_2143 2384614 - 2384363 - | hypothetical protein Nham_2144 2385321 - 2384968 - | hypothetical protein TERM 2172 2385387 - 2385411 + H 87 -4.1 -5.46698 | opp_overlap 2385383 2385388, overlap 2385388 TGGTTGCAGAACCGA AGCGGCCGGAT TCA ATCCATCCGCA TTTTTTGCTTTTCCC TERM 2173 2385905 - 2385895 - g 73 -8.2 -4.08216 | overlap 2385896 CGAGCTGCTGCAAAA GGGC GAC GCCC TGCCGTCGGCCGAGC Nham_2145 2385506 - 2385955 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2174 2386188 - 2386205 + F 100 -12.7 -5.46698 | opp_overlap 2386187 2386188 CCACCGCCAATGAAG GCCTCGC TTCG GCGAGGC TTTTTTGCTTTTACC TERM 2175 2386205 - 2386188 - f 71 -12.7 -2.60723 | opp_overlap 2386188, overlap 2386187 CCACCGCCAATGAAG GCCTCGC TTCG GCGAGGC TTTTTTGCTTTTACC Nham_2146 2386306 - 2386737 + | hypothetical protein TERM 2176 2387338 - 2387305 - T 100 -16.1 -3.91072 | opp_overlap 2387310, overlap 2387310 GTAAAGTCGCACAAA GAAAATGGCCGCGGC ATCC ACCGCGACCATCTTC CCGGATCAACCCGCC TERM 2177 2387333 - 2387310 - T 100 -12.4 -4.99043 | opp_overlap 2387310, overlap 2387305 GTCGCACAAAGAAAA TGGCCGCGGC ATCC ACCGCGACCA TCTTCCCGGATCAAC TERM 2178 2387375 - 2387348 - T 79 -13.4 -3.14211 | gap 1, opp_overlap 2387344 ATCTTCCCGGATCAA CCCGCCGCGGGTG AGG CACC-GCGGCCGG AAGCTCTAATCAATC Nham_2147 2387587 - 2387381 - | cold-shock DNA-binding domain-containing protein Nham_2148 2388660 - 2387587 - | hypothetical protein TERM 2179 2388417 - 2388400 - G 72 -7.7 -4.18934 | GATCAGGGCAACAAA CTCGCCT CGCA AGGCAAG CGACCGCCCGAGCAG Nham_2149 2389190 - 2388660 - | hypothetical protein Nham_2150 2389893 - 2389192 - | peptidase U35, phage prohead HK97 TERM 2180 2389432 - 2389413 - G 83 -7.8 -4.57569 | opp_overlap 2389431 GGATCGCTTCAAAAA TCGTGCGA ATGA TCGCGCGA CCGAGCTTCGGATCT Nham_2151 2391089 - 2389893 - | hypothetical protein TERM 2181 2391189 - 2391204 + r 77 -11.8 -3.61103 | opp_overlap 2391188 2391186 2391189 AGGCGCGGACAAGAT CGCGCC ACGC GGCGCG TTTCGGGTCGACTTC Nham_2153 2392976 - 2391462 - | phage terminase Nham_2154 2393436 - 2393083 - | hypothetical protein Nham_2155 2395711 - 2393624 - | virulence-associated E TERM 2182 2394111 - 2394073 - G 80 -4.6 -4.82901 | gap 2 TTGTCCCGATAAAAA CGCACTGGCGCGGCTCGA CGACC TCAAGGCG-GCC-GTACG GCGGGCGATAGCGTT TERM 2183 2395751 - 2395770 + r 100 -12.1 -5.61881 | opp_overlap 2395747 2395744 GAGAGAGACGACTTA GCCCCGG CGAGCA CCGGGGC TTTTTCTTTTTCAGA Nham_2156 2396136 - 2395951 - | putative transcriptional regulator TERM 2184 2396376 - 2396362 - R 79 -5.6 -4.72272 | TCCGGCTACGAAAAA CGCGGA GCG TTCGCG CGAATAGCATCGGCC Nham_2157 2397443 - 2396352 - | phage integrase TERM 2185 2397758 - 2397776 + H 76 -3.1 -4.94992 | gap 1, opp_overlap 2397751 TGGAGAGAGCATTCC GCTAG-GG AGCG CCACTGGC TTTTTCTCCCTTTGA Nham_2158 2398403 - 2398612 + | hypothetical protein TERM 2186 2398651 - 2398634 - f 71 -8.3 -4.09215 | opp_overlap 2398635, overlap 2398635 GACAGCAAGCACAAA GCCCCGC TACG GCGGGGT TTCTTTATGGTGCAC TERM 2187 2398635 - 2398650 + F 100 -11.8 -4.59342 | opp_overlap 2398634 2398635 ACAGCAAGCACAAAG CCCCGC TACG GCGGGG TTTCTTTATGGTGCA TERM 2188 2398650 - 2398635 - f 73 -11.8 -3.04806 | opp_overlap 2398635, overlap 2398634 ACAGCAAGCACAAAG CCCCGC TACG GCGGGG TTTCTTTATGGTGCA Nham_2159 2398684 - 2398956 + | hypothetical protein Nham_2160 2401130 - 2400021 - | transposase, IS4 Nham_2161 2401934 - 2401239 - | phosphoesterase, PA-phosphatase related TERM 2189 2401821 - 2401806 - G 73 -6.8 -4.25859 | GGGAATCGAAAAGAA CAAGGG AAAT CCCCTG AAGAGCGAATTGTTC TERM 2190 2402484 - 2402457 - R 74 -7.6 -4.10161 | CACGAGCGCTGAAAA TCGGGCCGAAGC TGGC GCCCCGACCGGA TCGACGGCGCCGATG Nham_2162 2402945 - 2402682 - | hypothetical protein lipB 2402988 - 2403713 + | lipoyltransferase TERM 2191 2403789 - 2403836 + T 72 -6.5 -4.34402 | gap 3, overlap 2403790 2403792 2403799 GGTGCGCGGACGTTT GCTTAGAGCCTTTCCGCTTCTGAT GGA ATCAGAAGCGG---GGCTCTATGA TTTTGATCTGACGCG Nham_2164 2404193 - 2403894 - | acylphosphatase TERM 2192 2404109 - 2404056 - G 73 -10.8 -3.61398 | opp_overlap 2404068, overlap 2404057 CGGCCCCGCGAACAA GGCCTCGACGCTGCCGTCGCGGCG ATTACG CACCCAGCCGGCAACGCCGAGACG GATGGCTTCGCGCAT TERM 2193 2404108 - 2404057 - G 75 -14.3 -2.76696 | opp_overlap 2404068, overlap 2404056 GGCCCCGCGAACAAG GCCTCGACGCTGCCGTCGCGGCG ATTACG CACCCAGCCGGCAACGCCGAGAC GGATGGCTTCGCGCA Nham_2165 2406282 - 2404267 - | carbamoyl-phosphate synthase L chain, ATP-binding TERM 2194 2405053 - 2405041 - G 71 -4.8 -4.52857 | overlap 2405043 ACCGTCGATATAAAA TGCG TCGAG CGCA TGAGCCTGCGCCTCG Nham_2166 2407171 - 2406599 - | hypothetical protein Nham_2167 2407559 - 2408218 + | peroxidase TERM 2195 2408281 - 2408245 - f 78 -11.6 -3.72576 | gap 1, opp_overlap 2408254, overlap 2408246 2408254 GCCGCCCCCACGAAA GCG-CATGAAGGGACGC CATT GCGTCCCTTCGTGTCGA TCGCGTACCCCTTGA TERM 2196 2408280 - 2408246 - f 83 -15.1 -2.83403 | gap 1, opp_overlap 2408254, overlap 2408245 2408254 CCGCCCCCACGAAAG CG-CATGAAGGGACGC CATT GCGTCCCTTCGTGTCG ATCGCGTACCCCTTG TERM 2197 2408254 - 2408271 + F 79 -12.7 -3.2794 | opp_overlap 2408254 2408246 2408245 ACGAAAGCGCATGAA GGGACGC CATT GCGTCCC TTCGTGTCGATCGCG TERM 2198 2408271 - 2408254 - f 79 -12.7 -3.20747 | opp_overlap 2408254, overlap 2408246 2408245 ACGAAAGCGCATGAA GGGACGC CATT GCGTCCC TTCGTGTCGATCGCG TERM 2199 2409012 - 2409030 + G 74 -10.2 -3.81488 | opp_overlap 2408998 AGGCGCCGGATTGAT GCCCGACG GCA CGTCGCGC TTCTCTTTGGACGGC TERM 2200 2409248 - 2409200 - g 70 -11.6 -3.13403 | gap 1, opp_overlap 2409216, overlap 2409198 GCGCGGTCATCAATA CCGCGAAGGTCGAACCCG-GCGC CAAG GCGATCGTGTTCGGCCTCGGCGG CATCGGACTGAACGT Nham_2168 2408659 - 2409786 + | zinc-binding alcohol dehydrogenase Nham_2169 2412128 - 2409858 - | adenylate/guanylate cyclase TERM 2201 2411569 - 2411547 - G 89 -14.8 -3.87994 | opp_overlap 2411543, overlap 2411522 ATTGACGCCGACAAA CGCCAGCCCG GCC CGGACCGGCG GACGCTTGTCGTTGG TERM 2202 2412506 - 2412559 + r 79 -13 -3.2964 | overlap 2412530 GTCGAGCGGGCGACG CGGGCTTTGCCGACCGCCTGCTGG GCGTGG CCGGAAGGCGGTCGCCGGACCGCG TTCTCGCGGGGCTTT Nham_2170 2413946 - 2412606 - | tetratricopeptide TPR_2 TERM 2203 2413772 - 2413791 + g 88 -7.2 -4.89852 | gap 1, opp_overlap 2413772 2413771 2413775, overlap 2413775 CGGCGAACTTGAAAC TCACCTCCA GGT TGGAGG-GA TTTTTGTACATCTGC Nham_2171 2414715 - 2415080 + | PRC-barrel TERM 2204 2415133 - 2415105 - T 75 -10.1 -3.64703 | opp_overlap 2415109 2415132, overlap 2415106 2415109 CTTCCGTTACTGAAA CTTACCCGCCGGG ATG CCCGGCGGGTTTT GTGCGTCAGGCGCGA TERM 2205 2415132 - 2415106 - T 76 -13.6 -2.78679 | opp_overlap 2415109, overlap 2415105 2415109 TTCCGTTACTGAAAC TTACCCGCCGGG ATG CCCGGCGGGTTT TGTGCGTCAGGCGCG TERM 2206 2415129 - 2415109 - T 95 -19.7 -2.66272 | opp_overlap 2415109, overlap 2415106 2415105 CGTTACTGAAACTTA CCCGCCGGG ATG CCCGGCGGG TTTTGTGCGTCAGGC TERM 2207 2415109 - 2415129 + T 100 -19.7 -4.42386 | opp_overlap 2415109 2415106 2415105 CGTTACTGAAACTTA CCCGCCGGG ATG CCCGGCGGG TTTTGTGCGTCAGGC Nham_2173 2416693 - 2415905 - | nodulate formation efficiency C protein TERM 2208 2416035 - 2416019 - G 83 -7.9 -4.65895 | GCGGCGAGCGAAAAA CGAGGCA GGC TGCCACG CGTCACGATTCTTCT TERM 2209 2416315 - 2416282 - G 71 -5.9 -4.33653 | CACGTAAAAAGGAAA CGTTAGGCTGCGG GTAGTCGT CCGCCACCTCACG AGCAATTAGAGACAG TERM 2210 2418684 - 2418723 + H 74 -13.8 -2.70298 | gap 1, opp_overlap 2418682 2418694, overlap 2418694 GGAACAGGACAAATC TTGCATGAAAGGGGCGC TTAAATC GCGCCCCTTTT-TGCAA CTTATGCTTCGCAGA TERM 2211 2418694 - 2418714 + H 93 -11.1 -4.63542 | opp_overlap 2418682 2418694, overlap 2418684 AAATCTTGCATGAAA GGGGCGC TTAAATC GCGCCCC TTTTTGCAACTTATG TERM 2212 2418714 - 2418694 - H 78 -11.1 -3.73968 | opp_overlap 2418694 2418684, overlap 2418682 AAATCTTGCATGAAA GGGGCGC TTAAATC GCGCCCC TTTTTGCAACTTATG TERM 2213 2418802 - 2418820 + H 72 -4.4 -4.56597 | opp_overlap 2418799 2418800, overlap 2418784 CGCTGTTGCAAATGC CTGGCAGC AGC GCCGACAG TTTTTCAGCCGGACA Nham_2175 2418932 - 2419417 + | hypothetical protein TERM 2214 2419436 - 2419463 + F 100 -18.4 -3.83026 | GGTCCATCATCGGCT GGCGTAGCGCGG ACTG CCGCGCTTCGCC TTTCCTCTGCAAAGG Nham_2176 2419678 - 2420028 + | hypothetical protein Nham_2177 2422785 - 2420128 - | multi-sensor signal transduction histidine kinase Nham_2178 2426442 - 2422948 - | indolepyruvate ferredoxin oxidoreductase TERM 2215 2423298 - 2423311 + g 81 -3.7 -5.06414 | overlap 2423290 ACTTCTTGACGGGCC GGCCG AGCG CGTCC TTTTTGTTGGCGAAC TERM 2216 2426782 - 2426736 - g 83 -15.3 -3.23899 | gap 1, overlap 2426731 2426745 2426772 2426773 2426775 GGCTAACGAACCTAA TCCGAACGATCGTTATCGGCGG GACC CCGCCGATAACGAT-GTGCAGC CGGCCGCACGTCTCG TERM 2217 2426774 - 2426745 - g 91 -20.9 -2.7566 | overlap 2426736 2426731 2426772 2426773 ACCTAATCCGAACGA TCGTTATCGGCGG GACC CCGCCGATAACGA TGTGCAGCCGGCCGC Nham_2179 2426719 - 2427123 + | hypothetical protein Nham_2180 2428009 - 2427194 - | hypothetical protein TERM 2218 2428417 - 2428461 + G 78 -15 -3.05384 | GGTCGTGGTTACCAT C-CCGGGCCTCGCGGCGTCTGC GTC GCAGAC-CGGCGCGGTCCGGCG TTCGATCGGCGAGAC Nham_2181 2428261 - 2428557 + | hypothetical protein TERM 2219 2428562 - 2428591 + T 83 -9.9 -4.32857 | CCTGGTGGTGAGACC CGGGATTCCCACC ATTC GGCGGGATTCCTG TTTATATTTGCACGA TERM 2220 2428610 - 2428629 + T 100 -15 -5.67283 | opp_overlap 2428610 ATATTTGCACGAAAA GGGCGGGA CCGA TCCCGCCC TTTTTTGTTTCCGTT TERM 2221 2428629 - 2428610 - T 100 -15 -4.26344 | opp_overlap 2428610 ATATTTGCACGAAAA GGGCGGGA CCGA TCCCGCCC TTTTTTGTTTCCGTT TERM 2222 2428843 - 2428862 + T 100 -16.4 -4.08485 | opp_overlap 2428843 CACGCACAAGAAAAA CCCGCGGC TCGC GCCGCGGG TTTCCTTTGGATCGC TERM 2223 2428862 - 2428843 - T 100 -16.4 -5.20333 | opp_overlap 2428843 CACGCACAAGAAAAA CCCGCGGC TCGC GCCGCGGG TTTCCTTTGGATCGC hppA 2431009 - 2428889 - | membrane-bound proton-translocating pyrophosphatase TERM 2224 2430092 - 2430079 - G 71 -9.5 -3.69482 | CCAGCGAATAGATAA CGGCG CCGA CGCCG ATCAGGGACAGGATA TERM 2225 2430320 - 2430361 + g 74 -14.3 -2.5805 | opp_overlap 2430319, overlap 2430319 2430334 GTAGGTCTCGAACAG GTCTGCGGCCATGCCGGCG CAGT CGCCGACGTTGTCGCCGAC GTTGTCGGCAATCGT TERM 2226 2431093 - 2431083 - R 80 -4.6 -4.87665 | opp_overlap 2431067, overlap 2431084 2431085 GCGGACGTACAAAAA GCGA AGT CCGC CTTGTGGTAAGGCGA Nham_2183 2432552 - 2431365 - | aminotransferase, class I and II Nham_2184 2432656 - 2434077 + | peptidase M48, Ste24p Nham_2185 2434121 - 2434888 + | DSBA oxidoreductase TERM 2227 2434924 - 2434942 + F 100 -16 -5.26875 | opp_overlap 2434924 CTCGCGCTTCAAAAA GCCCTCGC ATT GCGAGGGC TTTTTTCATTGACCA TERM 2228 2434942 - 2434924 - f 100 -16 -4.56597 | opp_overlap 2434924 CTCGCGCTTCAAAAA GCCCTCGC ATT GCGAGGGC TTTTTTCATTGACCA TERM 2229 2435204 - 2435164 - f 90 -16.1 -3.57561 | gap 1, opp_overlap 2435167 TCGGAACTCCTCAAA CAGCGGACGCGCG-GGCC GATTCT GGCCTCCCGCGGCCGCTG CGAGGCAGCCGGATC TERM 2230 2435677 - 2435646 - g 70 -10 -3.65046 | overlap 2435647 CGCCCATGCGAAGAA GGCGGCCGGCATCG TCAT CAACGCCGGCGGCT ACTCGCACACCTCGG TERM 2231 2435676 - 2435647 - g 72 -13.5 -2.78813 | overlap 2435646 GCCCATGCGAAGAAG GCGGCCGGCATCG TCAT CAACGCCGGCGGC TACTCGCACACCTCG Nham_2187 2435440 - 2435910 + | 3-dehydroquinate dehydratase Nham_2188 2435953 - 2436441 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 2232 2436689 - 2436715 + G 100 -9.2 -4.82901 | opp_overlap 2436684 TGTGAGATCACCGGC GCCGATGCCGTG CAT CCCGGCTACGGC TTTTTGTCCGAGAAC TERM 2233 2436902 - 2436921 + G 72 -7.8 -4.15833 | overlap 2436903 GACCACGATGCCATG GCGATCGC CAAG GCGATCGG TTTTCCCGTGCTGGT Nham_2189 2436467 - 2437822 + | acetyl-CoA carboxylase biotin carboxylase subunit Nham_2190 2437900 - 2439498 + | multi-sensor signal transduction histidine kinase Nham_2191 2439495 - 2439935 + | response regulator receiver domain-containing protein TERM 2234 2440542 - 2440495 - g 72 -11.9 -3.38951 | gap 1, opp_overlap 2440508, overlap 2440489 2440496 CGAGGAAGACATCAA GGCTGCGCTCACCGCCGCGATG GGTCG CGTCGCGGCCGTG-GCGCAGGT GCATCGCCGGCTCTA TERM 2235 2440541 - 2440496 - g 77 -15.4 -2.62889 | gap 1, opp_overlap 2440508, overlap 2440489 2440495 GAGGAAGACATCAAG GCTGCGCTCACCGCCGCGATG GGTCG CGTCGCGGCCGTG-GCGCAGG TGCATCGCCGGCTCT Nham_2192 2439932 - 2441020 + | signal transduction histidine kinase TERM 2236 2441052 - 2441039 - f 100 -9.5 -5.10029 | opp_overlap 2441046 ACCAACGGTAAAAAA GCGCG CCTC CGCGC ACCTCGCGGATTATA aat 2441214 - 2441891 + | leucyl/phenylalanyl-tRNA--protein transferase TERM 2237 2441944 - 2441894 - f 89 -17 -3.02144 | opp_overlap 2441897, overlap 2441897 2441902 CGACCGCGCGTAAGA TCATCATAGGGCCCCGCTTCTGAT AGA ATTAGAAGCGGGGCTCTATGATTT TGTTTTGACGCGTTT TERM 2238 2441941 - 2441897 - f 100 -23.1 -2.73875 | opp_overlap 2441897, overlap 2441894 2441902 CCGCGCGTAAGATCA TCATAGGGCCCCGCTTCTGAT AGA ATTAGAAGCGGGGCTCTATGA TTTTGTTTTGACGCG TERM 2239 2441897 - 2441941 + F 100 -27.5 -5.07652 | opp_overlap 2441894 2441897 2441902 CCGCGCGTAAGATCA TCATAGGGCCCCGCTTCTGAT AGA ATTAGAAGCGGGGCTCTATGA TTTTGTTTTGACGCG TERM 2240 2441936 - 2441902 - f 88 -17.2 -2.86432 | opp_overlap 2441897, overlap 2441897 2441894 CGTAAGATCATCATA GGGCCCCGCTTCTGAT AGA ATTAGAAGCGGGGCTC TATGATTTTGTTTTG Nham_2194 2442128 - 2442382 + | hypothetical protein TERM 2241 2442423 - 2442472 + T 79 -13.1 -3.32354 | gap 1, overlap 2442425 2442426 2442428 CGCTAATGGTGCCCG CTTCAGAGCCATTCCTCTTCTGAT GGA ATCAAAAGCGGAATGGCTCT-ATG ATTTTGATTTGACGC TERM 2242 2442425 - 2442473 + T 88 -10.6 -4.54727 | gap 2, overlap 2442423 2442426 2442428 CTAATGGTGCCCGCT TCA--GAGCCATTCCTCTTCTGAT GGA ATCAAAAGCGGAATGGCTCTATGA TTTTGATTTGACGCG TERM 2243 2442426 - 2442470 + T 89 -15.9 -3.22314 | overlap 2442423 2442425 2442428 TAATGGTGCCCGCTT CAGAGCCATTCCTCTTCTGAT GGA ATCAAAAGCGGAATGGCTCTA TGATTTTGATTTGAC TERM 2244 2442428 - 2442468 + T 100 -18.5 -3.16315 | overlap 2442426 2442423 2442425 ATGGTGCCCGCTTCA GAGCCATTCCTCTTCTGAT GGA ATCAAAAGCGGAATGGCTC TATGATTTTGATTTG Nham_2195 2443229 - 2442531 - | ABC transporter related TERM 2245 2442859 - 2442894 + g 78 -10.4 -4.07885 | gap 1, overlap 2442853 TTGACCGTCTCCGAG CGTC-TGAGGCCGCGGA TCA TCTGCGGCAGCATGACG TTTTCGAGCGCGGTG TERM 2246 2443135 - 2443151 + g 74 -2.1 -4.87803 | overlap 2443137 AACGCAAGCTTCGTG CCGTCCA GAA TGGTCAG TTTTGTTTCGCCCTG Nham_2196 2444519 - 2443239 - | LolC/E family lipoprotein releasing system, transmembrane protein Nham_2197 2445912 - 2444593 - | prolyl-tRNA synthetase Nham_2198 2447647 - 2446088 - | copper resistance D Nham_2199 2448215 - 2447682 - | nuclear export factor GLE1 TERM 2247 2448183 - 2448156 - G 83 -17 -2.62983 | CGCAGCGTTACACGA GGCCACCGCGGC AACT GCCGCGATGACC GTGCCGATCCACAAT Nham_2200 2448742 - 2448212 - | hypothetical protein TERM 2248 2448259 - 2448285 + g 74 -15 -2.53263 | TCATCGCTCCGCCCG CCGGCGCGCTCG GTG CGCGCGCGCCGA TGCCTTGCACATCGA Nham_2201 2451041 - 2448831 - | TonB-dependent receptor TERM 2249 2449897 - 2449876 - G 85 -10.1 -4.25283 | AGCCGGTTACGAAAA CCGCCGATC ACAC GATCGTCGG TAACCCGCGCGAACC Nham_2202 2451508 - 2451134 - | hypothetical protein TERM 2250 2451333 - 2451302 - G 74 -11.6 -3.49777 | gap 1, opp_overlap 2451300, overlap 2451296 2451306 GCCGACACAGCACAA CGTA-CAGCAGGCGC CGG ACGCCTGCTGCTGCG GGTCTGTCTGACCAT TERM 2251 2451328 - 2451306 - G 77 -15.6 -2.62788 | opp_overlap 2451300, overlap 2451302 ACACAGCACAACGTA CAGCAGGCGC CGG ACGCCTGCTG CTGCGGGTCTGTCTG TERM 2252 2451887 - 2451916 + r 85 -3.5 -5.41746 | overlap 2451891 2451909 AGGGTCGATACAATT TTGAGAGTGGGGC TTTG GTCCTGCTCTTTA TTTTTTTAAGAGCTT TERM 2253 2451891 - 2451912 + r 90 -6.5 -5.20328 | overlap 2451887 2451909 TCGATACAATTTTGA GAGTGGGGC TTTG GTCCTGCTC TTTATTTTTTTAAGA TERM 2254 2451909 - 2451929 + r 81 -4 -5.03314 | overlap 2451891 2451887 TGGGGCTTTGGTCCT GCTCTTTA TTTTT TTAAGAGC TTTTTTCAGGATCAG Nham_2203 2452352 - 2452077 - | hypothetical protein Nham_2204 2452756 - 2452352 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2255 2452426 - 2452408 - G 75 -4.5 -4.67982 | gap 1 TCGGATGGAAGAAAA GCAC-CGG CTTG CCGTGCGC ACCAATCTTCGGCTC TERM 2256 2452658 - 2452706 + g 81 -10.2 -4.11692 | gap 1, opp_overlap 2452669 2452671 2452672, overlap 2452659 CTCCGGCAGCGGCAC CGCGGCGGAAATAT-CCGCGCCG AAGG CGGCGCCGTAGATCTTCGCCGCC TTTTCGGCATCCCTG TERM 2257 2452659 - 2452705 + g 75 -13.7 -3.06694 | gap 1, opp_overlap 2452669 2452671 2452672, overlap 2452658 TCCGGCAGCGGCACC GCGGCGGAAATAT-CCGCGCCG AAGG CGGCGCCGTAGATCTTCGCCGC CTTTTCGGCATCCCT Nham_2205 2454543 - 2452870 - | beta-lactamase-like Nham_2206 2455352 - 2454540 - | biotin--acetyl-CoA-carboxylase ligase Nham_2207 2456803 - 2455367 - | NADH dehydrogenase subunit N TERM 2258 2456834 - 2456866 + r 85 -14.9 -3.16421 | overlap 2456833 2456826 CCTGCCGTGATCACG GCAGCG-CCGCCGCC TTGAT GGCGGCGGTCGC-GC TTGCATAATTATTGA Nham_2208 2458337 - 2456829 - | NADH dehydrogenase subunit M TERM 2259 2457527 - 2457500 - G 74 -2.6 -4.95155 | overlap 2457503 CCGAGAGCACAAAAA TCAGCGGCGC GAAATCAT GCGACGCCAA AGGGAACATCGGCAG Nham_2209 2460390 - 2458339 - | NADH dehydrogenase subunit L Nham_2210 2460782 - 2460474 - | NADH dehydrogenase subunit K Nham_2211 2461417 - 2460779 - | NADH dehydrogenase subunit J TERM 2260 2461127 - 2461115 - G 86 -7.7 -4.72986 | CAGTTCCAGCAAAAA GATCG CTG CGATC ACCAGGCCGAGCGGC Nham_2212 2461999 - 2461511 - | NADH dehydrogenase subunit I Nham_2213 2463077 - 2462007 - | NADH dehydrogenase subunit H TERM 2261 2462592 - 2462573 - G 71 -5.7 -4.26344 | ATACCGTGATGAAAA CGAAGCC GATCGA GACTTCG TACGAGACCATCTGC Nham_2214 2465158 - 2463083 - | NADH dehydrogenase subunit G TERM 2262 2463521 - 2463493 - G 78 -10.1 -4.07568 | overlap 2463494 2463496 CGGCGCCCGGCAAAA TGACGTCGGCGCG GTG CGCGCCCGCGTCG CCGTGAGTCCCGATA TERM 2263 2463520 - 2463494 - G 75 -13.6 -3.04398 | overlap 2463493 2463496 GGCGCCCGGCAAAAT GACGTCGGCGCG GTG CGCGCCCGCGTC GCCGTGAGTCCCGAT Nham_2215 2466488 - 2465163 - | NADH dehydrogenase I subunit F TERM 2264 2465775 - 2465763 - G 72 -2.6 -4.79451 | ACCCGAAATACAAAA CAGC TTGGT GCCG ACATTGTTGGGACGG Nham_2216 2467174 - 2466488 - | NADH dehydrogenase subunit E Nham_2217 2468154 - 2467189 - | methyltransferase FkbM Nham_2218 2469359 - 2468151 - | NADH dehydrogenase subunit D Nham_2219 2469979 - 2469359 - | NADH dehydrogenase subunit C Nham_2220 2470600 - 2469992 - | NADH dehydrogenase subunit B Nham_2221 2470962 - 2470597 - | NADH dehydrogenase subunit A Nham_2222 2471291 - 2471485 + | hypothetical protein Nham_2223 2471900 - 2472199 + | histone-like DNA-binding protein Nham_2224 2472351 - 2473604 + | peptidase T Nham_2225 2473718 - 2474038 + | hypothetical protein Nham_2226 2474913 - 2474056 - | methyltransferase type 11 TERM 2265 2475856 - 2475888 + r 89 -16.4 -3.4052 | gap 1, opp_overlap 2475862, overlap 2475862 ATAATCGGCCCATAG CGCAAACGGCGCCCT CTCA GGGGCGCCGTTT-CG TTGGTTAGCTTAAGA TERM 2266 2475862 - 2475883 + r 100 -15.1 -4.0075 | opp_overlap 2475862, overlap 2475856 GGCCCATAGCGCAAA CGGCGCCCT CTCA GGGGCGCCG TTTCGTTGGTTAGCT TERM 2267 2475883 - 2475862 - R 95 -14.4 -3.63627 | opp_overlap 2475862 2475856 GGCCCATAGCGCAAA CGGCGCCC TCTCAG GGGCGCCG TTTCGTTGGTTAGCT Nham_2227 2478330 - 2475907 - | ATP-dependent protease La clpX 2479921 - 2478647 - | ATP-dependent protease ATP-binding subunit Nham_2229 2480982 - 2480347 - | endopeptidase Clp TERM 2268 2481290 - 2481326 + r 78 -14.3 -2.63102 | CGGCGCGGGCCGGAC CCGAGGCCCGATCGACG CGC CGCCCGTCAGGCCTCGG TACTGTGCGCCTCGT tig 2482677 - 2481316 - | trigger factor TERM 2269 2482649 - 2482661 + g 74 -9.1 -3.91911 | AATTCGTGCCTCAGT CCCTC GGC GAGGG TTTCGTTCACCTGCA TERM 2270 2482698 - 2482722 + H 83 -13.5 -3.36878 | CAATCTTCTTCCGCT TGGCCCGGCCG GAA CGGCCGGATCA TTGTCAATCGGTCGA TERM 2271 2483114 - 2483101 - H 89 -3.7 -5.52384 | overlap 2483102 2483103 TTCGCAGCAAAAAAA TGGCC GTTC GGCCC GCCGGAGACTGCTGG Nham_2231 2483162 - 2484502 + | twin-arginine translocation pathway signal Nham_2232 2486016 - 2484517 - | hypothetical protein TERM 2272 2484679 - 2484659 - G 79 -8.2 -4.2558 | overlap 2484660 CAGGCCGCATCAAAA GCCGGCAC GCCCT GCGCCAGC AGCCCGCCGATCATG TERM 2273 2485263 - 2485221 - G 72 -11.9 -3.3197 | gap 1, overlap 2485212 2485258 2485259 AGAGCACGCTCACAA GCCCGGCT-CCGGCCCGCAG CGCG CCGCGCGCCGACAATCGGGC AGCGCCCGTCGAGGT TERM 2274 2486633 - 2486589 - g 72 -3.7 -4.57073 | gap 4 GATCTGGTCGAAAAA GCC-AT-CGACGCCATC-AGGCG CGC CGCCCAGACGG-GCCGCATCGGC GACGGCAAAATCTTC Nham_2233 2486373 - 2486711 + | nitrogen regulatory protein P-II (GlnB, GlnK) TERM 2275 2486859 - 2486843 - g 73 -10.9 -3.57128 | overlap 2486855 ATCAATCAAGGACAA CGACGTA AAG TACGTCG ATCTGCGATTCACCG Nham_2234 2486802 - 2488211 + | glutamine synthetase, type I TERM 2276 2488261 - 2488238 - f 100 -12.4 -4.67038 | opp_overlap 2488238 2488240, overlap 2488240 TCTCGAAAACCAAAA CAGGCGCTCC TGAC GGAGCGCCTT GTTTTTTGACGCCAC TERM 2277 2488238 - 2488262 + F 100 -12.2 -5.00616 | gap 1, opp_overlap 2488238 2488240, overlap 2488240 TCTCGAAAACCAAAA C-AGGCGCTCC TGAC GGAGCGCCTTG TTTTTTGACGCCACC TERM 2278 2488240 - 2488259 + F 100 -15 -4.61482 | opp_overlap 2488238 2488240, overlap 2488238 TCGAAAACCAAAACA GGCGCTCC TGAC GGAGCGCC TTGTTTTTTGACGCC TERM 2279 2488259 - 2488240 - f 100 -15 -3.94465 | opp_overlap 2488240 2488238, overlap 2488238 TCGAAAACCAAAACA GGCGCTCC TGAC GGAGCGCC TTGTTTTTTGACGCC TERM 2280 2488306 - 2488336 + F 77 -11.8 -3.53343 | gap 1 CTCCGGCCGTAGCAG CGGGCCGCGGCGG CGGGAT CAGCC-CGGCCCG TTTCAGGCGACAGTT TERM 2281 2488828 - 2488815 - g 77 -4.5 -4.82901 | CTTCCTCGAGAAAAA TGGCG TAGA CACCA GCTACTTCAATCTGA Nham_2235 2488450 - 2489637 + | hypothetical protein Nham_2236 2490034 - 2489738 - | antibiotic biosynthesis monooxygenase TERM 2282 2490204 - 2490173 - R 100 -15.9 -4.39287 | gap 1 CCAAGGACAGCAAAA CGCACCGGCGCCGG ATGAG CCGG-GCCGATGCG CTTAAAGTGCGGGGA TERM 2283 2490332 - 2490288 - R 100 -25.3 -4.35116 | overlap 2490291 CACGTCATATCAAAA CCATAGAGCCTCGCTTCTGAT TCC ATCAGAAGCGAGGCTCTAGAG TAGGTGTCAGGCCTT TERM 2284 2490329 - 2490291 - R 100 -27.8 -3.16202 | overlap 2490288 GTCATATCAAAACCA TAGAGCCTCGCTTCTGAT TCC ATCAGAAGCGAGGCTCTA GAGTAGGTGTCAGGC Nham_2237 2490908 - 2490360 - | hypothetical protein TERM 2285 2491108 - 2491077 - R 100 -15.9 -3.95424 | gap 1 ACCACGAATAGCAAA CGCACCGGCGCCGG ATGGA CCGG-GCCGATGCG CTTAAAGTGCGGGGG Nham_2238 2491711 - 2491199 - | MarR family transcriptional regulator TERM 2286 2492120 - 2492139 + r 89 -2.1 -5.7946 | overlap 2492115 GGTTAAGTCGCCTCC GTCCC TTTCGGATGC GGGAC TTTTTTTGTTGAGGC Nham_2239 2492635 - 2492171 - | hypothetical protein TERM 2287 2492834 - 2492820 - g 76 -6.4 -4.39828 | AACATGGCGATAAAA TACGGG CGT CCCATA GAAATGCGGGATGGA TERM 2288 2493437 - 2493482 + G 73 -8.1 -4.08692 | opp_overlap 2493471 CGATGAAGCCGGATT CGTCGACGTGCAGATCATGGC TTAC GCCGCGAAATACGCGTCGGCG TTTTACGGCCCGTTC Nham_2240 2492733 - 2493869 + | delta-aminolevulinic acid dehydratase TERM 2289 2493885 - 2493863 - f 78 -4.1 -4.96468 | gap 1, overlap 2493864 GAAACTGAAACAAAA CGGCTGACGT TCCA ACGCC-GCCA CCTGCAATGATTGCC TERM 2290 2494092 - 2494111 + G 100 -9.2 -5.54192 | CAGCCAGAACTGTTT CGCGGCGT CCTG ACGCGGCG TTTTTTTGCATTCCT Nham_2241 2493999 - 2494538 + | hypothetical protein Nham_2242 2494728 - 2495501 + | arginyl-tRNA-protein transferase TERM 2291 2495508 - 2495534 + T 70 -12.4 -2.7624 | CGGGACTAGAGCCTT TTCGCTTCTGAT GGA ATCAGAAGCGGG TCCTATGATTTTGAT Nham_2243 2497027 - 2495633 - | manganese transport protein MntH TERM 2292 2496905 - 2496848 - G 81 -13.4 -3.57263 | gap 2, overlap 2496834 2496858 ACCGGGACCCGCAAA GGCCAGCAGACGACGCAGCCAGTGCCCG GTCG CGGGCACCGGCACCGTCGCATG--GACC TCCTCAAGGCTGGGG TERM 2293 2496897 - 2496858 - G 100 -21.4 -2.81966 | overlap 2496834 2496848 GCAAAGGCCAGCAGA CGACGCAGCCAGTGCCCG GTCG CGGGCACCGGCACCGTCG CATGGACCTCCTCAA TERM 2294 2497301 - 2497268 - R 71 -11.2 -3.2963 | gap 2 ACTAGCGCCTGACAA CCTCGCCGTCTTCCTT GGTG AAGGAAG-CGGC-AGG ACGATCGAGCAGCTC Nham_2244 2497652 - 2497254 - | arsenate reductase Nham_2245 2498347 - 2497649 - | major intrinsic protein TERM 2295 2497809 - 2497790 - G 72 -7.8 -4.11751 | overlap 2497806 ACGAATTCCGGAAAA CGTGTTCG TCAG CGAACGCG CCACCGCGACGGCCG Nham_2246 2498850 - 2498503 - | ArsR family transcriptional regulator Nham_2247 2501293 - 2499044 - | DNA topoisomerase IV subunit A TERM 2296 2500876 - 2500847 - G 78 -12.2 -3.73224 | opp_overlap 2500848 GTAGTTGGGACGAAA CTCGACGGCATC CTCGTC GATGCCTTCGAG CAGCAGCCGCGCGAC recO 2502280 - 2501519 - | DNA repair protein RecO TERM 2297 2501775 - 2501717 - G 76 -10.2 -3.85817 | gap 3, overlap 2501718 AGCCTCGCGCAGAAA CGGTGGCAGCCGCAGCAG-CCGGTCGCGC CACG GCTCG-CCGGCCTGCCGCGAC-ACCGCCC CGCCCGATTTCGGTG TERM 2298 2501774 - 2501718 - G 74 -13.7 -2.91276 | gap 3, overlap 2501717 GCCTCGCGCAGAAAC GGTGGCAGCCGCAGCAG-CCGGTCGCGC CACG GCTCG-CCGGCCTGCCGCGAC-ACCGCC CCGCCCGATTTCGGT Nham_2249 2502701 - 2502324 - | hypothetical protein TERM 2299 2502391 - 2502374 - G 76 -5.5 -4.62622 | overlap 2502376 TGAATGACAAATAAA TCCCGGC CCCG GCCAGAA CGGTCGAAAACAGGT era 2503632 - 2502715 - | GTP-binding protein Era TERM 2300 2503203 - 2503221 + g 78 -6.7 -4.56597 | gap 1, overlap 2503203 2503204 TGCGCCCGTTGGCCG C-GCTGGC CAGC GCCAGCAG TTTTTCGCGGGGCAC Nham_2251 2504429 - 2503629 - | ribonuclease III TERM 2301 2504353 - 2504403 + g 74 -13.1 -3.25942 | gap 1 TTCGGCGCAGGCTCC GCCGGCTCCGTGC-CGGACGGCAC GATC GCGGCGTCCGAGTCCGGGACCGGC TTGATGTCAGCCAAT Nham_2252 2505184 - 2504426 - | peptidase S26A, signal peptidase I acpS 2506048 - 2505629 - | 4'-phosphopantetheinyl transferase Nham_2254 2506815 - 2506045 - | pyridoxal phosphate biosynthetic protein PdxJ Nham_2255 2509211 - 2506902 - | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA TERM 2302 2509413 - 2509394 - R 93 -12.8 -4.27316 | TCCTTGAACGCAAAA GCCCGGAC CAGG GCCCGGGC TTGCAAACGTCACGG Nham_2256 2509834 - 2509442 - | DNA-directed RNA polymerase subunit omega Nham_2257 2510165 - 2510785 + | hypothetical protein TERM 2303 2511178 - 2511167 - g 72 -7.2 -4.17048 | GCCGCCGCAAAACAA GCCG CTGC CGGC CGAGATCAACACCTG Nham_2258 2510763 - 2511491 + | uracil-DNA glycosylase superfamily protein TERM 2304 2511562 - 2511510 - T 100 -15.7 -4.41494 | overlap 2511513 2511515 2511534 2511547 CATGCTCAATCAAAA GGATAGCGCTAGAGTCTGATTTAAC GCA GTCGAACCAGACTCTAGCGCAACGC TGAAATCTACCTCGC TERM 2305 2511559 - 2511513 - T 100 -18.2 -3.18268 | overlap 2511510 2511515 2511534 2511547 GCTCAATCAAAAGGA TAGCGCTAGAGTCTGATTTAAC GCA GTCGAACCAGACTCTAGCGCAA CGCTGAAATCTACCT TERM 2306 2511557 - 2511515 - T 100 -20.8 -3.14708 | overlap 2511513 2511510 2511534 2511547 TCAATCAAAAGGATA GCGCTAGAGTCTGATTTAAC GCA GTCGAACCAGACTCTAGCGC AACGCTGAAATCTAC Nham_2259 2511883 - 2511569 - | hypothetical protein smpB 2512476 - 2512003 - | SsrA-binding protein TERM 2307 2512508 - 2512543 + r 70 -4.7 -4.45765 | gap 1, opp_overlap 2512510, overlap 2512510 2512531 CGGCGCCTTTCGAGG AAGGCGACGACGCC CGATCCGGC GGCGTTG-CGCCTA TTTCTTCGTTTTCAG Nham_2261 2512960 - 2512541 - | large conductance mechanosensitive channel protein Nham_2262 2513922 - 2513032 - | dihydrodipicolinate synthase TERM 2308 2514062 - 2514074 + H 70 -4.7 -4.40993 | opp_overlap 2514061 2514062, overlap 2514063 CGGAGCGCACACAAT CCCGG CGC CCGGA TTTTAGTGCTTTGTC TERM 2309 2514408 - 2514384 - g 80 -4.9 -4.83169 | overlap 2514388 AGCCCCGGACAAAAA CAAAGCCAAGG CCA CCGTAGCTCCG GCAATTCAACCGGCC TERM 2310 2514404 - 2514388 - g 81 -4.3 -4.96501 | overlap 2514384 CCGGACAAAAACAAA GCCAAGG CCA CCGTAGC TCCGGCAATTCAACC TERM 2311 2516116 - 2516091 - g 76 -6 -4.57569 | opp_overlap 2516105, overlap 2516106 TCATCGCCTGAAAAA CGAGCCCGCC TATAAC GCCGCGCTCG GCGCAGCGGAGCTCG TERM 2312 2516124 - 2516106 - g 77 -13.8 -3.29144 | opp_overlap 2516105, overlap 2516091 CGAGCCCGCCTATAA CGCCGCGC TCG GCGCAGCG GAGCTCGGAGGTCTG Nham_2263 2514154 - 2516403 + | lytic transglycosylase, catalytic Nham_2264 2516820 - 2516524 - | hypothetical protein TERM 2313 2516972 - 2516932 - R 89 -2.6 -5.75945 | overlap 2516934 ATTTGCTAAAAAAAA TC-CCGTCGTTGCTTCCGGC AGG GCC-GAGACAAAGACGACGA CCGACGAGAAGCCCT TERM 2314 2517029 - 2517008 - R 100 -13.7 -4.77165 | opp_overlap 2517008 CCCGGCAGAACAAAA CCCCGGCAA TTTC CTGCCGGGG TTCTCTTGGGATGTC TERM 2315 2517008 - 2517029 + r 84 -13 -3.68325 | opp_overlap 2517008 CCCGGCAGAACAAAA CCCCGGCA ATTTCC TGCCGGGG TTCTCTTGGGATGTC Nham_2265 2518582 - 2517062 - | putative porin TERM 2316 2519140 - 2519117 - R 100 -17.4 -5.07652 | opp_overlap 2519117 GCCGGCAAAACAAAA CCCCCGGCAG TTTC CCGCCGGGGG TTCGTTCAGATCGTC TERM 2317 2519117 - 2519140 + r 87 -15.2 -3.36289 | opp_overlap 2519117 GCCGGCAAAACAAAA CCCCCGGCAG TTTC CCGCCGGGGG TTCGTTCAGATCGTC Nham_2266 2520676 - 2519168 - | putative porin TERM 2318 2519287 - 2519271 - G 76 -7.9 -4.25104 | opp_overlap 2519270 2519273 TTGTTGTTAGCAAAA TGCGCCG TAC CGGCGTA CTTCTGATCCAGCAT Nham_2267 2521513 - 2522370 + | tetratricopeptide TPR_2 Nham_2268 2522691 - 2522425 - | hypothetical protein Nham_2269 2523394 - 2523065 - | hypothetical protein Nham_2270 2523535 - 2523422 - | hypothetical protein TERM 2319 2523955 - 2523985 + r 83 -14.2 -3.14564 | TCGCGAGGGTGCGCC TTTTGCGAATCGTA AAA TCCGATTCGCAAAA TTGATCCAGCGATCG gatB 2525728 - 2524244 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 2320 2524382 - 2524406 + g 77 -13.6 -3.35679 | gap 1 GGCCTTGTCCGGGTT GGCGG-CGACG ATGT CGTCGACCGCC TTCTCGATCGCGCCC Nham_2272 2527199 - 2526084 - | transposase IS116/IS110/IS902 Nham_2273 2528717 - 2527302 - | patatin TERM 2321 2528507 - 2528484 - G 95 -10.9 -4.41494 | CACGCCGAAGGAAAA GGCCGCGGC CCGCGT GCCGCCGCC CGAGAACGACAACCC Nham_2274 2529007 - 2528714 - | hypothetical protein gatA 2530479 - 2529004 - | aspartyl/glutamyl-tRNA amidotransferase subunit A Nham_2276 2530682 - 2530476 - | hypothetical protein TERM 2322 2530644 - 2530656 + g 91 -9.1 -4.4078 | opp_overlap 2530644 GAGGTAATCCATATA GGCCT GAT AGGCC TTTTCATTACCGCAG gatC 2530984 - 2530697 - | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 2323 2530767 - 2530799 + g 72 -2.6 -4.81551 | gap 1, overlap 2530742 CCGACGATCTTATCG GCGATGCCGCCGT CATTGACC ACGTCGGCC-CGC TTTTTCATCTCCATC Nham_2278 2532223 - 2531153 - | 2-nitropropane dioxygenase, NPD TERM 2324 2531693 - 2531717 + g 73 -6.4 -4.25104 | gap 1, opp_overlap 2531663 ACCCGCCTCCGCACC CTGCG-CGATG ATGG CATCGACGCCG TTTTCCTCGAGCCAA TERM 2325 2531975 - 2531943 - G 76 -11.2 -3.79678 | AACTCTTTATAATAA GCGGCAAGCCGGGT CCGCC ACCCGGCCTCACGC TGCGGATCGGCCGCG Nham_2279 2532335 - 2532841 + | Holliday junction resolvase YqgF Nham_2280 2533685 - 2532876 - | abortive infection protein TERM 2326 2533557 - 2533536 - G 74 -12.3 -3.53343 | AAGTTGCCCTGCAAA CATCGCGGC AAAT ACCGCGATG CCCCACAGGCTGGTG Nham_2281 2535339 - 2533696 - | acyl-CoA dehydrogenase-like pyrB 2535547 - 2536500 + | aspartate carbamoyltransferase catalytic subunit Nham_2283 2536573 - 2537874 + | dihydroorotase TERM 2327 2538402 - 2538418 + G 84 -11.5 -4.10657 | TGCTCGGTCTGTTCT GGCCGGC AGC GCTGGCC TTTTGCGCGATCTGG Nham_2284 2538041 - 2538637 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 2328 2538694 - 2538709 + F 71 -7.5 -4.18494 | overlap 2538693 CAGACCGACGGCCTT CGCGC CGCTGC GCGCG TTTTGCGTGAACATG TERM 2329 2538942 - 2538985 + G 79 -13.6 -3.53012 | overlap 2538971 AGCGCTGGCCCGCCT GCCCGACCTGGCACGACGCG GCGG CGCTTCGCGCCCGGGCCGGC TTTGCGACGAAGCGG Nham_2285 2538796 - 2539914 + | DNA processing protein DprA, putative Nham_2286 2541396 - 2540026 - | hypothetical protein TERM 2330 2541664 - 2541676 + G 81 -2.6 -5.24129 | overlap 2541674 GTGGTTTTCGATGGA CCGT TTGTT GCGG TTTTTTCTGGACCGG TERM 2331 2542325 - 2542312 - g 91 -3.1 -5.40072 | gap 1, overlap 2542313 CGCCGGCGAAAAAAA CCTGAC GCA GTC-GG CGAAGTTCCTGCTCC Nham_2287 2541659 - 2542909 + | cyclopropane-fatty-acyl-phospholipid synthase Nham_2288 2543296 - 2543015 - | hypothetical protein TERM 2332 2543394 - 2543434 + H 75 -3.8 -4.82901 | gap 1, overlap 2543394 CGCGCGACCTCGTCG CC-TGTCGGCCAAGCCGCG CCGA CGCCTCATGACCGGCAAGG TTTTTCTGGCCGCAG Nham_2289 2543612 - 2545102 + | replicative DNA helicase TERM 2333 2545244 - 2545254 + G 73 -8.2 -4.08216 | TTGCCAGAAACCGGT GCCG ATG CGGC TTTTACGGCGGCTGC Nham_2290 2545184 - 2546380 + | alanine racemase TERM 2334 2546651 - 2546663 + G 71 -5.5 -4.3739 | overlap 2546649 2546652 CTGAGCTCGATCGCG TCACC GGC GGTGG TTTTGTGCGCGGCTC Nham_2291 2546410 - 2547858 + | DNA repair protein RadA Nham_2292 2547947 - 2548663 + | colicin V production protein TERM 2335 2548779 - 2548801 + G 71 -9 -3.70902 | overlap 2548780 CCTTCCAGCGACACG CCCGAGTCGG AAC CCGACCCGGA TTTCGGTCTCGACGG Nham_2293 2548746 - 2550260 + | amidophosphoribosyltransferase Nham_2294 2550833 - 2550303 - | GCN5-related N-acetyltransferase TERM 2336 2550863 - 2550909 + r 100 -31.4 -4.54727 | opp_overlap 2550866 2550868 2550870 CCATTCCTTTCCTAA TCATAGAGCCTTTGCTTCTGAT GGA ATCAGAAGCAAAGGCTCTATGA TTTTGATTTGACGCA TERM 2337 2550906 - 2550866 - R 100 -27.3 -2.70932 | opp_overlap 2550863, overlap 2550868 2550870 TTCCTTTCCTAATCA TAGAGCCTTTGCTTCTGAT GGA ATCAGAAGCAAAGGCTCTA TGATTTTGATTTGAC TERM 2338 2550904 - 2550868 - R 100 -25.5 -2.90075 | opp_overlap 2550863, overlap 2550866 2550870 CCTTTCCTAATCATA GAGCCTTTGCTTCTGAT GGA ATCAGAAGCAAAGGCTC TATGATTTTGATTTG TERM 2339 2550902 - 2550870 - R 100 -22.3 -3.00298 | opp_overlap 2550863, overlap 2550868 2550866 TTTCCTAATCATAGA GCCTTTGCTTCTGAT GGA ATCAGAAGCAAAGGC TCTATGATTTTGATT TERM 2340 2550948 - 2550972 + r 70 -12.1 -2.75064 | overlap 2550945 ACGCGAACCGGTACC CGTCCTCGGGT CAA GCCCGAGGACA TGCTTCGCTCGAAAA Nham_2295 2551537 - 2551034 - | hypothetical protein TERM 2341 2551729 - 2551698 - H 100 -18.8 -4.56597 | CCCCTCCCGCAAAAA GCCGCGCTCTTCAC CGGA GTGAACAGCGCGGC GAGTCCTGGGGAACA TERM 2342 2551747 - 2551764 + H 76 -12.7 -3.03159 | opp_overlap 2551746 2551747 2551758 GTCCTGGGGAACAAG GCCGGAC CGAA GTCCGGC TCTTACCGGCATTCG TERM 2343 2551764 - 2551747 - H 73 -12.7 -2.76696 | opp_overlap 2551747, overlap 2551746 2551758 GTCCTGGGGAACAAG GCCGGAC CGAA GTCCGGC TCTTACCGGCATTCG Nham_2296 2552132 - 2552434 + | hypothetical protein TERM 2344 2552468 - 2552518 + F 85 -9.9 -4.41494 | gap 2, overlap 2552473 2552474 TGCTGATTCTGAGAC GGCT-CG-CCAGAGTCTGATTCAAC TGC GTTGCATCAGACTCTGGTCTTATCC TTTTGATTGAGCATG TERM 2345 2552473 - 2552512 + F 100 -17.4 -3.72152 | gap 1, overlap 2552468 2552474 ATTCTGAGACGGCTC G-CCAGAGTCTGATTCAAC TGC GTTGCATCAGACTCTGGTC TTATCCTTTTGATTG TERM 2346 2552474 - 2552510 + F 100 -21.1 -3.42359 | overlap 2552473 2552468 TTCTGAGACGGCTCG CCAGAGTCTGATTCAAC TGC GTTGCATCAGACTCTGG TCTTATCCTTTTGAT Nham_2297 2552721 - 2553788 + | hypothetical protein TERM 2347 2554181 - 2554205 + G 75 -14.3 -2.77899 | opp_overlap 2554177, overlap 2554178 GGCCCAAGCCACGCT GACGCTGACCA TCG TGGTCAGCGCC TACTTCCTCGCCGAG Nham_2298 2553867 - 2554448 + | hypothetical protein TERM 2348 2554470 - 2554490 + T 74 -14 -2.55074 | opp_overlap 2554468 2554465 TTCGAGCAAAGCATG TCCCCGGG CCTGA CCCGGGGA TGAATTCCGGTTCGC Nham_2299 2554843 - 2554577 - | hypothetical protein Nham_2300 2556043 - 2554943 - | hypothetical protein TERM 2349 2555775 - 2555754 - G 84 -15.9 -3.28791 | ACCCGGTCGGGATAA CGGTGGACG ATTC CGTCCACCG GTGAATGCGCGCGAT Nham_2301 2557077 - 2556040 - | lysine--tRNA ligase TERM 2350 2556196 - 2556206 + g 73 -8.2 -4.02108 | overlap 2556194 CAGCGGATAGCGCTC GCCG TAG CGGC TTTGCTTGTCGTCCA Nham_2302 2557221 - 2557787 + | elongation factor P TERM 2351 2558198 - 2558213 + G 78 -6.8 -4.57569 | CTGATGCAGCTCAAT GCGGTA ACGC TGCCGC TTTTTGCGCGCATCA TERM 2352 2558527 - 2558504 - g 76 -8 -4.25104 | opp_overlap 2558508 2558518 2558524, overlap 2558505 CCGTCGGGAGGAAAA GGCGAGCCCG TGAG CGCGCTCGCG GCGCAGTTTCCGGAT Nham_2303 2557922 - 2559619 + | peptidase M23B TERM 2353 2559610 - 2559596 - f 75 -9.2 -3.87994 | ACCCATCCCGAGAAA CCCGCC GAG GGCGAG GACGACTGAGGAAGA Nham_2304 2559689 - 2560912 + | lytic murein transglycosylase Nham_2305 2561501 - 2561079 - | endoribonuclease L-PSP TERM 2354 2561184 - 2561158 - G 100 -4.3 -5.5112 | gap 1, opp_overlap 2561161, overlap 2561159 2561160 TTGATGAACAAAAAA GTGTGCG-CCGG CAGG CCGGGCGCATCC TTAAACGCCTCGGCG Nham_2306 2562878 - 2561847 - | transposase IS116/IS110/IS902 TERM 2355 2562880 - 2562890 + r 83 -5.4 -4.93877 | ATAATCTTCTCCATG GGAA CGG TTCC TTTTGTTTCGTGGCG Nham_2307 2564818 - 2562977 - | single-stranded-DNA-specific exonuclease RecJ glpX 2565881 - 2564886 - | fructose 1,6-bisphosphatase II TERM 2356 2565676 - 2565707 + g 76 -8 -4.2528 | gap 1 TCGTCGATCTCGCCC TCGCCGATC-ACGAC CGT GCCGTCGATCGGCAA TTTGTTGAGTTCGCG Nham_2309 2567250 - 2565928 - | homoserine dehydrogenase Nham_2310 2568549 - 2567332 - | aminotransferase TERM 2357 2568131 - 2568101 - G 76 -8.4 -4.1552 | gap 2, overlap 2568123 CAGGCGGCGAAGAAA TCCGGCGTCGGTGC TGAAG GCACCGA-GC-GGA TCACGCCGCCCGCCA TERM 2358 2568828 - 2568859 + r 80 -9.4 -4.21194 | CGTCCGGGGAGACCT GGGACTGGTGGTCG CGTG CGGCGATCAGTTCC TTTTCGATCCTGGCC Nham_2311 2569119 - 2568805 - | hypothetical protein TERM 2359 2569061 - 2569083 + g 72 -7.6 -4.22554 | opp_overlap 2569042 GCGGCGCAGACCGTC GCGCGGCC TATACGC GTCCGCGC TTGTTTCTTCGATGC TERM 2360 2571170 - 2571118 - g 73 -12.6 -3.15663 | opp_overlap 2571147, overlap 2571102 2571105 2571104 ATCGACGCCGAGGAA GTCGCTGCCCGCGA-GGTCGGCAGCG TCG CGCTGCCGCCGATCGAGGAC-GCGCC GGGCAGCTATGTCCG Nham_2312 2569393 - 2571198 + | Poly(R)-hydroxyalkanoic acid synthase, class I Nham_2313 2571411 - 2571809 + | hypothetical protein Nham_2314 2572891 - 2571893 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 2361 2572906 - 2572927 + r 75 -5.7 -4.63542 | overlap 2572908 TGACGTCATCCTTGC ATCCGCGAG CACG CTCGCGGTC TTTTTCGGACTTGTA TERM 2362 2572908 - 2572925 + r 87 -12.7 -3.92577 | overlap 2572906 ACGTCATCCTTGCAT CCGCGAG CACG CTCGCGG TCTTTTTCGGACTTG Nham_2315 2573536 - 2573006 - | hypothetical protein TERM 2363 2573234 - 2573220 - G 73 -7 -4.3739 | overlap 2573224 CATTTCTCCACAAAA GCCACG CCG CGAGGC AAAAGGCCGGGATGC Nham_2316 2573819 - 2574187 + | hypothetical protein Nham_2317 2574303 - 2576354 + | DNA topoisomerase IV subunit B Nham_2318 2576374 - 2578188 + | hypothetical protein Nham_2319 2578221 - 2578406 + | hypothetical protein Nham_2320 2579812 - 2578547 - | hypothetical protein Nham_2321 2580157 - 2581620 + | DEAD/DEAH box helicase-like TERM 2364 2581643 - 2581689 + F 86 -5.4 -5.07652 | gap 2, overlap 2581621 2581618 CGGCTGCGCGGCCTC CAGTGGTCC--TTCGATTCT AAATTCGCA AGAATCGGACCGGACCGCTG TTTTGTTTTGACGCC TERM 2365 2582460 - 2582480 + G 71 -8.9 -3.83318 | TGGCGCTGGCGATCG GCGAAGGCG GGC CGCTGTCGC TTCTGTTGTTCGACA Nham_2322 2581850 - 2582914 + | diguanylate cyclase Nham_2323 2583570 - 2583166 - | HesB/YadR/YfhF TERM 2366 2583403 - 2583414 + g 72 -7.2 -4.24342 | overlap 2583401 CGTGTAGGATTGGCC GGCG CAGC CGCC TTTCTTGATGCCGAC Nham_2324 2584009 - 2583629 - | hypothetical protein Nham_2325 2585250 - 2584006 - | SufS subfamily cysteine desulfurase Nham_2326 2586731 - 2585406 - | FeS assembly protein SufD TERM 2367 2586794 - 2586777 - R 78 -9.1 -4.14243 | GATCTCATCCGAAAA CCGGAAG GCCG CTCCCGG GGTCATGCTTCCTCG Nham_2327 2587546 - 2586797 - | FeS assembly ATPase SufC TERM 2368 2587650 - 2587661 + r 74 -7.2 -4.3739 | opp_overlap 2587650 TCGCCCGGCGCAAAA CCGG CAAG CCGG TTTTGTCGCGAGCTC Nham_2328 2589171 - 2587690 - | cysteine desulfurase activator complex subunit SufB Nham_2329 2590451 - 2589252 - | aminotransferase, class V TERM 2369 2590466 - 2590478 + H 83 -7.7 -4.62471 | CGCGGACAAAGCCGC GCAAG ATG CTTGC TTTTTGCCCCTTGCC Nham_2330 2590625 - 2591272 + | hypothetical protein anmK 2592502 - 2591402 - | anhydro-N-acetylmuramic acid kinase TERM 2370 2593403 - 2593371 - g 90 -17.7 -3.01712 | opp_overlap 2593364, overlap 2593380 CGTCGGGCGCGAAGA TGGGCAAGACCGCGC AAG GCGCGGTCTGGCTCA ATGCCGATGCCTTCA TERM 2371 2593394 - 2593380 - g 71 -12.8 -3.06315 | opp_overlap 2593364, overlap 2593371 CGAAGATGGGCAAGA CCGCGC AAG GCGCGG TCTGGCTCAATGCCG Nham_2332 2592662 - 2593918 + | tyrosyl-tRNA synthetase Nham_2333 2597784 - 2594017 - | hypothetical protein TERM 2372 2598528 - 2598506 - g 70 -9.8 -3.57462 | CACCGTACTGGTAAA TGCGGACGGT CGG ATCGCCCGCA TCTGGCGCCGGGTCA Nham_2334 2597958 - 2598593 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2373 2599526 - 2599506 - g 80 -14.7 -3.20616 | ATGACGAAGATGGAA GCCGGAACG CCG CGTCCCGGC ACGGGCGGCCCCTAT TERM 2374 2600020 - 2599990 - g 71 -9.7 -3.78953 | overlap 2599992 2599993 ATCTGCACTACGAAA CACGGATCGACGG GGACG CCGTCGATCCCCA GAAATTTCTTCGAGC TERM 2375 2600018 - 2599992 - g 74 -12.3 -3.48024 | overlap 2599990 2599993 CTGCACTACGAAACA CGGATCGACGG GGACG CCGTCGATCCC CAGAAATTTCTTCGA TERM 2376 2600017 - 2599993 - g 78 -15.8 -2.68493 | overlap 2599992 2599990 TGCACTACGAAACAC GGATCGACGG GGACG CCGTCGATCC CCAGAAATTTCTTCG Nham_2335 2598693 - 2600060 + | peptidase M23B Nham_2336 2600575 - 2602452 + | ABC transporter related TERM 2377 2602499 - 2602469 - T 88 -16.2 -3.05384 | overlap 2602472 GCCTTTCCGAGCGAA GCATGTCCTCGGGC TTG ACCCGAGGACATGT AAGGGTTCGCGTGAA TERM 2378 2602496 - 2602472 - T 87 -16.5 -2.75064 | overlap 2602469 TTTCCGAGCGAAGCA TGTCCTCGGGC TTG ACCCGAGGACA TGTAAGGGTTCGCGT TERM 2379 2602572 - 2602542 - T 85 -11.2 -4.03204 | overlap 2602535 2602543 GATCAAAGTCATAAA GCCCCGCTTCTGAT TCC ATCAGAAGCGGAAA GGCTCTGAGTCGCCG TERM 2380 2602571 - 2602543 - T 82 -14.7 -3.01199 | overlap 2602535 2602542 ATCAAAGTCATAAAG CCCCGCTTCTGAT TCC ATCAGAAGCGGAA AGGCTCTGAGTCGCC Nham_2337 2603141 - 2602593 - | hypothetical protein Nham_2338 2603754 - 2603299 - | DNA polymerase III subunit chi Nham_2339 2605253 - 2603751 - | leucyl aminopeptidase TERM 2381 2604480 - 2604492 + g 74 -4.7 -4.58283 | opp_overlap 2604475 2604479 2604476, overlap 2604475 2604481 GCCGACGAAAGCGAC CGGCG GCT CGCCC TTTTTGCCGCCGTTC TERM 2382 2605244 - 2605230 - G 73 -7 -4.32607 | CGAAAACGGAACAAA GCCGAC CTT GACGGC GTCGATCATCAGCAA TERM 2383 2605656 - 2605669 + G 73 -8.1 -4.03093 | AGTACATTTTCCGGA CGACG CTGG CGTCG TTTGTCGTGGTTCTG TERM 2384 2606580 - 2606596 + G 71 -9.4 -3.72363 | overlap 2606584 TTGTGACGGTTTTCG GCCTGC GCATG GCAGGC TTTGCGCTTTCGGTC Nham_2340 2605625 - 2606794 + | permease YjgP/YjgQ TERM 2385 2607817 - 2607854 + G 71 -11.1 -3.52455 | overlap 2607817 2607818 2607820 ATGAATCCAATCGCT GCGGCGTGGCTGCCCGT TTGC GTGGGCGGCCTCGCTGG CTTTTTGGTCTTGCT TERM 2386 2607817 - 2607855 + G 100 -10.9 -4.89233 | gap 1, overlap 2607817 2607818 2607820 ATGAATCCAATCGCT G-CGGCGTGGCTGCCCGT TTGC GTGGGCGGCCTCGCTGGC TTTTTGGTCTTGCTG TERM 2387 2607818 - 2607853 + G 75 -14.6 -2.70389 | overlap 2607817 2607817 2607820 TGAATCCAATCGCTG CGGCGTGGCTGCCCGT TTGC GTGGGCGGCCTCGCTG GCTTTTTGGTCTTGC TERM 2388 2607820 - 2607851 + G 74 -13.6 -2.88275 | overlap 2607818 2607817 2607817 AATCCAATCGCTGCG GCGTGGCTGCCCGT TTGC GTGGGCGGCCTCGC TGGCTTTTTGGTCTT Nham_2341 2606791 - 2607888 + | permease YjgP/YjgQ Nham_2342 2607888 - 2610383 + | organic solvent tolerance protein Nham_2343 2610487 - 2611446 + | hypothetical protein TERM 2389 2612042 - 2612002 - g 71 -8.9 -3.85817 | opp_overlap 2612009 2612010 2612014 ACTGGCGGCGACAAA CGGCCAACCGCCGCAAC CGGTGAT GTTGCTGTGGTCGTCCG ATCTGGCGGTGGTGC pdxA 2611562 - 2612569 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 2390 2613085 - 2613063 - g 78 -10.5 -4.07568 | opp_overlap 2613078 CGTCGCCCGCGAAAA CGAGGAGGC TTATG GCCGCCTCG CCGTACTGTCGAACT ksgA 2612566 - 2613429 + | dimethyladenosine transferase TERM 2391 2614190 - 2614168 - g 70 -10.6 -3.54029 | opp_overlap 2614168 2614164 CGTCATCAAGGAGAA TGACGGCG GCTTCAA CGCCGTCA TTGATTTCGCCGGCA Nham_2346 2613443 - 2614501 + | zinc-binding alcohol dehydrogenase Nham_2347 2614704 - 2615726 + | hypothetical protein gmk 2616394 - 2615735 - | guanylate kinase Nham_2349 2617285 - 2616398 - | hypothetical protein Nham_2350 2618932 - 2617682 - | aminodeoxychorismate lyase TERM 2392 2617717 - 2617765 + g 73 -10.8 -3.60104 | gap 1, opp_overlap 2617694, overlap 2617715 2617716 AAGGCTCTGCCGCGC CCTGCCGGGCCGGCCGGGGTCGC TTCC GCGGCGCAGGCTT-CGCGGCAGG TGTTTCTCCTGTCGC TERM 2393 2618309 - 2618326 + g 71 -12.7 -3.06915 | opp_overlap 2618311, overlap 2618311 CCAGATTTCCGCAAG CAGGCGC TTCT GCGCCTG TTGCATGCGCTGGAT Nham_2351 2620326 - 2619061 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 2394 2619492 - 2619466 - G 73 -10.9 -3.54424 | gap 1, opp_overlap 2619467 2619471 2619487, overlap 2619467 GGTCATGCTTCGAAA TGCGCCATCGCC GTCC GGCGACGGCG-A GGTGATGTGATAGGC TERM 2395 2620397 - 2620365 - R 82 -9.1 -4.50058 | gap 1, opp_overlap 2620365 GAGCCATAAGGAAAA GCCGG-TGGACCGT TCGCTC ACGGCCCGTCCGGC TTCATCAAGATCGCG acpP 2620660 - 2620421 - | acyl carrier protein Nham_2353 2621671 - 2620934 - | 3-oxoacyl-(acyl-carrier-protein) reductase Nham_2354 2622650 - 2621691 - | malonyl CoA-acyl carrier protein transacylase TERM 2396 2621839 - 2621829 - G 74 -4.6 -4.59773 | overlap 2621830 TCCGATCTCGAAAAA GCGC GTC ACGC CATGTCCCGCCATGT TERM 2397 2623034 - 2623053 + H 73 -2.9 -4.82901 | gap 1, opp_overlap 2623028 TTAGGAAAGGACACC CATGCCTC TCTAT GAG-CATG TTTTTCTCGCGCGCC rpsF 2623035 - 2623478 + | 30S ribosomal protein S6 rpsR 2623484 - 2623723 + | 30S ribosomal protein S18 TERM 2398 2623726 - 2623773 + F 85 -9.4 -4.54727 | gap 3, overlap 2623729 CGTCATCCGCTAGAG TCCTGGAGCCTTTCCGCTTCTGA CGCCA TCAGAAGCGG---GGCTCCATGA TTTTGATTTGACGCG TERM 2399 2623862 - 2623900 + F 100 -9.5 -5.14965 | gap 1, overlap 2623865 GAAACGCTCTAATTC GGCGATGGGCGACGGCGT TCAC AC-CCGCCGCCCGTCATC TTTTTTCATAAGGCT TERM 2400 2623865 - 2623897 + F 73 -12 -3.11701 | gap 1, overlap 2623862 ACGCTCTAATTCGGC GATGGGCGACGGCGT TCAC AC-CCGCCGCCCGTC ATCTTTTTTCATAAG Nham_2357 2624163 - 2624510 + | hypothetical protein TERM 2401 2624946 - 2624917 - f 83 -13.7 -3.61398 | opp_overlap 2624923, overlap 2624923 CGCGGTTGGTAATAA CAAAAAGCCCGCA GCGA TGCGGGCTTTTTT TACAGCGTCGCCGGC TERM 2402 2624940 - 2624923 - f 100 -12.7 -5.29445 | opp_overlap 2624923, overlap 2624917 TGGTAATAACAAAAA GCCCGCA GCGA TGCGGGC TTTTTTTACAGCGTC TERM 2403 2624923 - 2624940 + F 100 -12.7 -5.41143 | opp_overlap 2624923 2624917 TGGTAATAACAAAAA GCCCGCA GCGA TGCGGGC TTTTTTTACAGCGTC Nham_2358 2625220 - 2625510 + | hypothetical protein Nham_2359 2625777 - 2626073 + | hypothetical protein TERM 2404 2626093 - 2626078 - T 100 -11.8 -4.65446 | opp_overlap 2626078 ACGACATATAGAAAA CCCCGC CGGA GCGGGG TTTCTTAGTCGTTCG TERM 2405 2626078 - 2626093 + T 93 -11.8 -4.29227 | opp_overlap 2626078 ACGACATATAGAAAA CCCCGC CGGA GCGGGG TTTCTTAGTCGTTCG Nham_2360 2627054 - 2626110 - | hypothetical protein TERM 2406 2626214 - 2626234 + g 100 -9 -4.87133 | overlap 2626212 GTCCCTGCTTCACTT TGCCGAGC AAATA GCTTGGCA TTTTGTTTGCGACGT TERM 2407 2627041 - 2627053 + g 83 -7.7 -4.55721 | overlap 2627033 2627025 CCGGTGACCAAGTCT TGGCT TTT AGCCA TTTTATCTAGCCTTT TERM 2408 2627176 - 2627197 + H 88 -11.5 -4.19238 | opp_overlap 2627176 2627175 TTCGATCTACGAAAG GCCGTCGCG GTTC CGTGGCGGC TTTTCGCGTTCGAAG TERM 2409 2627321 - 2627348 + H 100 -16.3 -4.33417 | opp_overlap 2627315 CCCCAAGGACCCCGA CCCGCCGGTGA CGCCCC TCGCCGGCGGG TTTCTTGTGCATCGC Nham_2361 2627582 - 2628025 + | PRC-barrel TERM 2410 2628399 - 2628422 + T 100 -8.8 -5.54907 | opp_overlap 2628396 2628395 TTGGACGAGAACTTG CCCGCTGG GAAAAGGA CCGGCGGG TTTTTCTTTTGTCCG TERM 2411 2628566 - 2628541 - T 100 -10.3 -5.09426 | opp_overlap 2628542, overlap 2628542 TTGAAGTGGAAAAAA GGCCCGACGCC GTAA AGCGCCGGGCT AGTTGAGAGCGGAGC TERM 2412 2628565 - 2628542 - T 88 -13.8 -3.64933 | opp_overlap 2628542, overlap 2628541 TGAAGTGGAAAAAAG GCCCGACGCC GTAA AGCGCCGGGC TAGTTGAGAGCGGAG Nham_2362 2629452 - 2628925 - | hypothetical protein TERM 2413 2629101 - 2629115 + g 73 -12.8 -3.15768 | overlap 2629109 ATCCGGACTTGTTGT CGCGGC GTC GCCGCG TATTGGCGTTTTGAT Nham_2363 2630291 - 2629668 - | hypothetical protein TERM 2414 2629761 - 2629741 - G 86 -4.8 -5.1523 | gap 1, overlap 2629745 2629756 TTCACAATAGAAAAA CCAACAATC GAAC GATTGT-GG AGGCGCGTTTTACCA Nham_2364 2630637 - 2630407 - | hypothetical protein Nham_2365 2631279 - 2630839 - | hypothetical protein Nham_2366 2631716 - 2631279 - | hypothetical protein Nham_2367 2632486 - 2631716 - | hypothetical protein TERM 2415 2632110 - 2632132 + g 79 -13.4 -3.53343 | opp_overlap 2632109 2632108 AAGGCGTCGATAACC GGCTGCGGCA TGG TGCCGTGGCC TTTGCCGAACCCATT TERM 2416 2633341 - 2633359 + G 81 -7.4 -4.42386 | GGATTGGTTGTCCGA TTACCGCC ATC GTCGGTAA TTTTCTGAGTGGCGA TERM 2417 2633613 - 2633627 + G 81 -4.2 -5.02476 | overlap 2633614 GGCTGGATGGAGCTT GGGTTC CAA GAACCG TTTTTTCGAGAATCT Nham_2368 2632689 - 2633726 + | methyltransferase type 12 Nham_2369 2636223 - 2633911 - | glycosyl transferase, group 1 Nham_2370 2637253 - 2636207 - | methyltransferase FkbM Nham_2371 2638549 - 2637479 - | phage late control D Nham_2372 2638765 - 2638553 - | phage tail X Nham_2373 2639197 - 2638772 - | phage P2 GpU Nham_2375 2641685 - 2641446 - | hypothetical protein TERM 2418 2641584 - 2641574 - G 74 -5.4 -4.59109 | overlap 2641575 CAGACTCTGCAAAAA GGAT GGT ATCC AGCGCTTTCGAATAC Nham_2376 2641996 - 2641703 - | hypothetical protein Nham_2377 2642521 - 2642006 - | phage major tail tube protein TERM 2419 2642046 - 2642076 + g 70 -10.5 -3.65351 | gap 1, overlap 2642050 CTGCTGGTCTGCGAC TGACCGCCGATCGA GACG TCGAACGGCG-TCA TTTCGATCAGGGTGC Nham_2378 2644017 - 2642581 - | phage tail sheath protein Nham_2379 2644596 - 2644060 - | hypothetical protein Nham_2380 2646365 - 2644593 - | Phage-related tail fibre protein-like Nham_2381 2647028 - 2646366 - | Phage tail protein I Nham_2382 2648074 - 2647025 - | baseplate J-like protein TERM 2420 2647406 - 2647378 - G 71 -13.1 -3.02829 | TACAGGCGCGGAACA CGCGGTCCAGCAG CGC CTGGTCGACCGCG CCATACGTCTCCGTC TERM 2421 2647959 - 2647994 + g 76 -14 -3.16564 | gap 1, opp_overlap 2647948 2647979, overlap 2647961 TCGACCCCGACCCGC GCCAGCGCGGCGACAAG AAA CTCGTC-CCGCGCTGTC TTGATAGCCTCGAAA TERM 2422 2647961 - 2647992 + g 83 -15.2 -3.14602 | gap 1, opp_overlap 2647948 2647979, overlap 2647959 GACCCCGACCCGCGC CAGCGCGGCGACAAG AAA CTCGTC-CCGCGCTG TCTTGATAGCCTCGA Nham_2383 2648448 - 2648071 - | GPW/gp25 Nham_2384 2649181 - 2648657 - | Phage-related baseplate assembly protein V TERM 2423 2648987 - 2649038 + g 82 -10.8 -4.10453 | gap 1, overlap 2648985 GTGCGTTTTGATGCC GCCGGCGGCG-ATCTCCTGCCATGG CAC CCATGGCGAAAGATACGGCTTCGGC TTTTCCGAGAATTTG Nham_2385 2649970 - 2649185 - | hypothetical protein Nham_2386 2650350 - 2649970 - | hypothetical protein TERM 2424 2650172 - 2650184 + g 76 -9.1 -3.9941 | overlap 2650166 GACTGCGCCGCGCTG CCAGC AAC GCTGG TTTCCTTGTCGCCGC TERM 2425 2650266 - 2650289 + g 76 -8.8 -4.24342 | gap 1, opp_overlap 2650267, overlap 2650267 CACCACTTTTCATGA AGGCC-AGCCG CAC CGGCTCGGCCA TTTCTTCATCAACAG TERM 2426 2650267 - 2650288 + g 70 -12.3 -3.14284 | gap 1, opp_overlap 2650267, overlap 2650266 ACCACTTTTCATGAA GGCC-AGCCG CAC CGGCTCGGCC ATTTCTTCATCAACA TERM 2427 2650288 - 2650267 - G 70 -12.3 -3.1505 | gap 1, opp_overlap 2650267 2650266 ACCACTTTTCATGAA GGCC-AGCCG CAC CGGCTCGGCC ATTTCTTCATCAACA TERM 2428 2650354 - 2650408 + r 72 -4.8 -4.56597 | gap 1, overlap 2650365 AGCTGGCTGCATGAT CGCCTCCGAAT-GTGGCGGCGGGGC TATTCT GCCTCGCCGCCGCTGCTATCAGGTG TTTTTGGCGCGCAGC TERM 2429 2650365 - 2650396 + r 95 -18.7 -2.64987 | overlap 2650354 TGATCGCCTCCGAAT GTGGCGGCGGGGC TATTCT GCCTCGCCGCCGC TGCTATCAGGTGTTT Nham_2387 2651433 - 2650402 - | hypothetical protein TERM 2430 2651253 - 2651288 + g 76 -12.5 -3.53444 | CGGGAGCGCCACGCG GCGACGGCGCCACCA ACTGGA TGGTGTCGCCGATGC TTTCCAGCGCAATGG Nham_2388 2652172 - 2651519 - | hypothetical protein Nham_2389 2653242 - 2652187 - | peptidase S14, ClpP Nham_2390 2653497 - 2653258 - | hypothetical protein Nham_2391 2655110 - 2653494 - | phage portal protein, lambda TERM 2431 2653982 - 2653957 - G 77 -13.3 -3.66844 | opp_overlap 2653956 2653955 TTCACACTCGAATAA CTGGCGCTGGA ATGG TCCATCGCCAG GCTTTCGTAAGTGAT Nham_2392 2656870 - 2655107 - | phage terminase GpA Nham_2393 2657366 - 2656818 - | hypothetical protein Nham_2394 2658171 - 2657596 - | hypothetical protein Nham_2395 2658225 - 2658425 + | hypothetical protein Nham_2396 2658873 - 2659046 + | hypothetical protein TERM 2432 2659156 - 2659140 - T 73 -3.5 -4.82128 | overlap 2659142 CTATCAAAGAGAAAA CACCGCG ACC CGGGGAG CCAACAAGCGGCCGC Nham_2397 2660006 - 2659584 - | hypothetical protein Nham_2398 2660593 - 2660003 - | NusG antitermination factor Nham_2399 2660950 - 2660615 - | hypothetical protein Nham_2400 2662549 - 2661416 - | hypothetical protein TERM 2433 2662517 - 2662475 - G 70 -10.4 -3.66999 | opp_overlap 2662478, overlap 2662477 2662478 ATCGACCCACTCAAA GATCGGCTTCGCCCGCGGCG TGC CGCCGGGGATGAAACCGTTG ATCTCGATGGGAGCG TERM 2434 2662515 - 2662477 - G 76 -13 -3.41569 | opp_overlap 2662478, overlap 2662475 2662478 CGACCCACTCAAAGA TCGGCTTCGCCCGCGGCG TGC CGCCGGGGATGAAACCGT TGATCTCGATGGGAG TERM 2435 2662514 - 2662478 - G 80 -16.5 -2.6462 | opp_overlap 2662478, overlap 2662477 2662475 GACCCACTCAAAGAT CGGCTTCGCCCGCGGCG TGC CGCCGGGGATGAAACCG TTGATCTCGATGGGA TERM 2436 2662478 - 2662514 + g 82 -14.3 -3.2794 | opp_overlap 2662477 2662475 2662478 GACCCACTCAAAGAT CGGCTTCGCCCGCGGCG TGC CGCCGGGGATGAAACCG TTGATCTCGATGGGA TERM 2437 2662537 - 2662561 + g 71 -5.5 -4.30576 | overlap 2662530 CGATGGGAGCGATCG GGCGATGGGTC ACC GCGCCACCGCC TTTTGATCCTGAAAC Nham_2401 2663067 - 2662546 - | hypothetical protein Nham_2402 2664223 - 2663189 - | hypothetical protein TERM 2438 2663562 - 2663578 + g 72 -4.3 -4.56597 | overlap 2663547 CCTTGCAGCCGCAGA TCGGCCG GCA CGGATGA TTTTTGAGGCGAAGC TERM 2439 2663726 - 2663752 + g 71 -13.1 -3.07307 | overlap 2663715 GACAGTGGCTTCGAT GGGGCTTTGAA TGGGC TTCGAAGCCCC TTCGATGGGGCTTTC Nham_2403 2664998 - 2664402 - | hypothetical protein TERM 2440 2664479 - 2664534 + g 73 -3 -4.7373 | gap 1, opp_overlap 2664495 2664496 2664497, overlap 2664481 2664482 GCCCAGCGCGATCAG TGTTCGGAGCCAAAAACCCCAAGGCGG TTT CCGCGCGGGCGAGTTTGGCACCGA-CG TTTTTACTGGCATCG TERM 2441 2665222 - 2665250 + r 86 -15.9 -2.78384 | GGATGCCGCCGTCAT GCCGCACGCTCCG GCT CGGAGGGGGCGGC TCTGGTCGGGAGAAA Nham_2404 2665502 - 2665218 - | hypothetical protein TERM 2442 2665498 - 2665469 - G 74 -13.1 -3.28924 | gap 1, opp_overlap 2665475, overlap 2665470 GAGCTGGCTCCATAA CTGCAATGTTCTGA TAA TCAGAACATTGC-G TCAAGATAAATTTCC TERM 2443 2665842 - 2665871 + G 93 -7.7 -4.98255 | opp_overlap 2665819 2665831, overlap 2665849 2665850 CGCACCGTCAGCGTC CGCGGTGTCGCCG TCGG TGGCGACGACGGG TTTTTCTACTTCGGA Nham_2405 2665560 - 2666222 + | putative phage repressor TERM 2444 2666565 - 2666583 + F 76 -7.3 -4.53034 | overlap 2666566 TATTAGCCACCCCAC AGGCCGC AACGC GCGGCCA TTTTGATTCTGTGAA TERM 2445 2666667 - 2666649 - f 73 -11.8 -3.10464 | opp_overlap 2666641 2666638, overlap 2666641 GCATCAACTTGAACA TGTTGCGA AAT TCGCAACA CAATCAACGGTGTTG Nham_2406 2666686 - 2667285 + | hypothetical protein TERM 2446 2667320 - 2667301 - T 100 -15 -4.54727 | opp_overlap 2667300 2667297 CCGTTTAAACGAAAA CCGGACCC GCAA GGGTCCGG CTGATCTCTAACCAA TERM 2447 2667410 - 2667441 + T 71 -11.6 -3.28712 | TCAGTACCGTCAGAG GCTATCGGTCGCGT TGGC GCGTGACTGGTAGC TTCTGAGACGGGCCG Nham_2407 2668471 - 2668010 - | hypothetical protein Nham_2408 2668960 - 2669724 + | phage-encoded protein-like Nham_2409 2669721 - 2670050 + | hypothetical protein Nham_2410 2670288 - 2671010 + | hypothetical protein Nham_2411 2671013 - 2671603 + | hypothetical protein TERM 2448 2672741 - 2672722 - g 86 -7.8 -4.77036 | overlap 2672725 GGCGACCAGCAAAAA GCAGCCGA CAGT TCCGCTGC CGCCGCGGCTGCTGG Nham_2413 2671895 - 2673097 + | phage integrase TERM 2449 2673261 - 2673248 - f 78 -9.5 -3.98661 | opp_overlap 2673252 TAGATCCACTAGAAA CCCGC GAAT GCGGG CAATCGTTTGACGCA TERM 2450 2674119 - 2674150 + G 73 -12.8 -3.11768 | GATGCGCCGCAGCAC GGCACCGGCGCGGC TCCG GCCGGGCCGCCGCC TGTTGACTGGTATCC Nham_2414 2673810 - 2674796 + | hypothetical protein rplI 2674839 - 2675447 + | 50S ribosomal protein L9 TERM 2451 2675468 - 2675514 + T 70 -3.6 -4.63218 | opp_overlap 2675449 2675466 2675511, overlap 2675470 GCGGCGCGAACGACG CTCGAACCTTTTCGCTTCCCAT AAC ATCGGAAGCGAAAATTGACGCG TTTTCTTCACGCGAA TERM 2452 2675561 - 2675541 - T 71 -12.6 -2.57067 | opp_overlap 2675539, overlap 2675537 CGAACAGGTAATCCA TCCTCGGG TCAAG CCCGAGGA CATGCTTTGCTTGAA TERM 2453 2675644 - 2675668 + T 100 -21.5 -4.14764 | opp_overlap 2675644 GTCCACAAAGCAAAA CGGCCGGCACT TGA AGTGCCGGCCG TTTGATTCTTTGCGG TERM 2454 2675668 - 2675644 - T 100 -21.5 -4.61873 | opp_overlap 2675644 GTCCACAAAGCAAAA CGGCCGGCACT TGA AGTGCCGGCCG TTTGATTCTTTGCGG Nham_2416 2678089 - 2675690 - | ATPase AAA-2 TERM 2455 2677342 - 2677327 - G 71 -4.6 -4.42386 | overlap 2677329 TGTCGAGCGAGAAAA CGGTCG AGGC CGACAG CACCTCGGGAACTTC Nham_2417 2678723 - 2678349 - | ATP-dependent Clp protease adaptor protein ClpS TERM 2456 2679530 - 2679506 - g 76 -11.3 -3.7941 | opp_overlap 2679511 CACGCCCTATAACAA CGGGACGCCGG CGA CCGTCGTCCTG TCCGGCTCGGGAAAC TERM 2457 2680446 - 2680418 - g 74 -2.3 -4.93316 | overlap 2680419 2680436 CAACAACATCAAAAA CGATCCGATCAGC AAG ACCGATCCGACCC GCAGGACGCGGATCT Nham_2418 2679165 - 2680616 + | hypothetical protein TERM 2458 2680643 - 2680664 + T 100 -9.3 -4.98531 | opp_overlap 2680617 2680643, overlap 2680630 CATCCCATAGAAAAA GCACGGCCG ATGA TGGCCGGGC TTTTTCATTTGAGGA TERM 2459 2680664 - 2680643 - T 100 -8.6 -4.9792 | opp_overlap 2680643 2680630, overlap 2680617 CATCCCATAGAAAAA GCACGGCC GATGAT GGCCGGGC TTTTTCATTTGAGGA Nham_2419 2681031 - 2680693 - | hypothetical protein TERM 2460 2680758 - 2680780 + g 72 -12 -3.31144 | AGGTTTGTCTGGCGA GATCGGCGTA GAG TTCGCCGATC TTCTGCGACTCCACA TERM 2461 2681450 - 2681474 + G 72 -7.8 -4.11216 | gap 1, overlap 2681451 2681454 CGAGCTGGCGCAATC GGACTGGCGGC ACTG GCCGCC-GTCG TTTTCACGATCGACC Nham_2420 2681399 - 2683159 + | Serine-type D-Ala-D-Ala carboxypeptidase Nham_2421 2684159 - 2683374 - | heat shock protein DnaJ-like Nham_2422 2684883 - 2684188 - | hypothetical protein TERM 2462 2684232 - 2684217 - G 70 -7.5 -4.08216 | TCATTTGTCCCAAAA GCCGG GTCGCA CCGGC GGCGGTCGTCGACAG TERM 2463 2684363 - 2684306 - G 86 -18.3 -2.60244 | gap 1, opp_overlap 2684348 2684349, overlap 2684281 2684311 GCGCGAAGCAATTCA CGCAACTGAGCCGCAGCGCC-GGGGTCG AAC CGGCACCAGGCGCCGCCGGTCAGCCGCG CGATTTCTCGAAACC TERM 2464 2684358 - 2684311 - G 75 -14 -3.10677 | gap 1, opp_overlap 2684348 2684349, overlap 2684281 2684306 AAGCAATTCACGCAA CTGAGCCGCAGCGCC-GGGGTCG AAC CGGCACCAGGCGCCGCCGGTCAG CCGCGCGATTTCTCG TERM 2465 2686105 - 2686092 - g 72 -4.5 -4.56597 | TGGTGGCGGCAAAAA TCGGA ACGA CCCGA CTGATCGACAATATC Nham_2423 2685278 - 2686129 + | pantoate--beta-alanine ligase TERM 2466 2686417 - 2686450 + G 71 -10.9 -3.43654 | gap 1, opp_overlap 2686398 GCCCGGGTGTTCCCG GACCG-GCGCGACCCG ACG CGGGTCGTGCACAGCC TTGTCGATATGTTTC Nham_2424 2686252 - 2687595 + | transposase, IS4 TERM 2467 2687867 - 2687827 - T 81 -11.2 -3.84389 | overlap 2687828 CAGTCAAGAAGATAA GGCCAGAGTCTGATTCGA CGCAT TTGAAACAGACTCTGGCG GCAAGCACCGCCCCG TERM 2468 2687866 - 2687828 - T 82 -14.7 -2.8991 | overlap 2687827 AGTCAAGAAGATAAG GCCAGAGTCTGATTCGA CGCAT TTGAAACAGACTCTGGC GGCAAGCACCGCCCC Nham_2425 2688348 - 2687893 - | hypothetical protein TERM 2469 2688064 - 2688117 + g 71 -8.3 -3.85698 | opp_overlap 2688068, overlap 2688067 2688084 CTTCGGTTGCATGAC CAGA-CGGCATCGA-CCGATGCCGTCG CCGT CG-CGGAA-CGGCTCGATGCCGATCAG TTTCTCCCGGGCGGC Nham_2426 2689293 - 2688352 - | hypothetical protein Nham_2427 2689775 - 2689584 - | hypothetical protein Nham_2428 2690708 - 2690052 - | glutathione S-transferase-like Nham_2429 2691643 - 2690780 - | hypothetical protein TERM 2470 2691220 - 2691241 + g 76 -10.1 -3.90744 | overlap 2691226 GTGCAGGACGCGGCT GCGGCGC AGGCTGGA GCGCCGC TTGTTTCGAGGCGGG Nham_2430 2691745 - 2692014 + | hypothetical protein Nham_2431 2692826 - 2692023 - | hypothetical protein TERM 2471 2692301 - 2692317 + g 73 -6.5 -4.28994 | TTGGCGAAACCAGCT TGCGGGT GAA ACGCGCA TTTTCATCGGTGGTC TERM 2472 2692715 - 2692727 + g 74 -10.5 -3.78775 | opp_overlap 2692708 CCAGCAAACCCGTGC CGGCG CGC CGCCG TTTCATGATCAGCAG Nham_2432 2693738 - 2692920 - | 2,5-didehydrogluconate reductase TERM 2473 2693568 - 2693510 - G 78 -15.4 -2.71712 | opp_overlap 2693558, overlap 2693540 2693543 CGTTGGGCGCGAAAT GCGTG-GTCCAGACCTTGGTCGTGACGA AAACA TCGTCCCGACCGATG-CCGGACGCACGC AGGCCTTCGCCGACT Nham_2433 2694204 - 2693839 - | XRE family transcriptional regulator TERM 2474 2694598 - 2694621 + G 72 -3.8 -4.59773 | overlap 2694600 ATTCTGGCTGCGCTC GCTCGCGA ATGCGTCC TCGCGACC TTTTTCCAGGTCGGC TERM 2475 2694800 - 2694746 - g 70 -10.4 -3.56092 | overlap 2694761 2694787 CGATGACTTTTGAAA CCGCCAGGGACAACATCGACCGCGGC ATC GCCGCCGACGAAGCCGCCCTCCACGG CAAGGCGACGAACGT Nham_2434 2694274 - 2695155 + | polysaccharide deacetylase Nham_2435 2695242 - 2696528 + | polysaccharide deacetylase Nham_2436 2696820 - 2696590 - | hypothetical protein TERM 2476 2697192 - 2697177 - g 91 -9 -4.56597 | CCTCCCCGCTAAAAA CGGATC GGTC GATCCG GATGCCAATTTCCAG TERM 2477 2699384 - 2699354 - g 74 -5.2 -4.54047 | opp_overlap 2699362, overlap 2699355 2699361 2699362 TGATTGCAGAGAAAA TCGCAAAGGGGCCG AGC CGGCGCTTTGGCGC CGATCCCGGCAAGCC Nham_2437 2696986 - 2699796 + | DNA topoisomerase I Nham_2438 2699777 - 2702149 + | ribonuclease R Nham_2439 2702146 - 2702586 + | hypothetical protein Nham_2440 2702630 - 2703370 + | NUDIX hydrolase rpmG 2703546 - 2703713 + | 50S ribosomal protein L33 TERM 2478 2703804 - 2703823 + T 100 -10 -5.07652 | ACTCAATAGCTTAGC GCGGGATC TTCG GATCTCGC TTTTATTTTGACCAA pleD 2705215 - 2703842 - | response regulator PleD Nham_2443 2705591 - 2705226 - | response regulator receiver domain-containing protein Nham_2444 2705823 - 2706122 + | hypothetical protein TERM 2479 2706907 - 2706881 - g 76 -10.8 -3.79668 | opp_overlap 2706884, overlap 2706884 ATCGAATTGATGAAA CAATTTGCGGCC GAG GGCCGCCGATTG TGGCGGCTGGCGCGC Nham_2445 2706119 - 2707408 + | DNA polymerase IV TERM 2480 2707422 - 2707412 - T 87 -8.2 -4.74801 | opp_overlap 2707412 CAACGTCAGTAAAAA CGGC CAA GCCG TTCGTAGGATTACCT Nham_2446 2708338 - 2707448 - | hypothetical protein TERM 2481 2708277 - 2708227 - G 76 -10.8 -3.80622 | overlap 2708228 AGAGAAACGGAACAA CGGCCGCGGCGTGCGCGGCGCTAC CGG GTGGCGGCAGGCCCGCCGCTGCTA CGGCCAGCGTCAGAA Nham_2447 2708451 - 2709545 + | tISRso5; ISRSO5-transposase protein TERM 2482 2709944 - 2709916 - g 78 -14.6 -3.07962 | opp_overlap 2709912 CGTCACAGTTGAACA GGGCAGC-GCCGCG GCG CGCGGCTGC-GCCC TCAATCTGCTGGCGC Nham_2448 2709725 - 2710192 + | endoribonuclease L-PSP TERM 2483 2710233 - 2710290 + G 76 -12.5 -3.53224 | gap 1, opp_overlap 2710280 GACGGCACGACCGGT CGCCCACCGCGGCCTGCACGACGACGCC CGC GGCATCGTCGAG-AGCATGCCGGGGGCG TTTCGAGCCGCCATC TERM 2484 2710551 - 2710538 - g 76 -8.1 -4.14739 | TGATCGAGGTCAAAA GCCGT TTCG ACGGC GATCGCAGGCTGGTG Nham_2449 2710198 - 2710950 + | glycerophosphoryl diester phosphodiesterase TERM 2485 2711361 - 2711399 + G 70 -13.1 -2.89564 | gap 1 CCGCGCCACTTGATC GCACGGCTCGACGGCGCG GTCG TGGG-CGTCGTGCCGTGC TATCTGAAGTCGCAC TERM 2486 2711477 - 2711464 - g 71 -9.5 -3.73775 | opp_overlap 2711464 CCCAGGCCTATGAAA GCGCC GGAG GGCGC TATTACCCCAAGCTG Nham_2450 2711097 - 2712350 + | hypothetical protein Nham_2451 2712383 - 2712811 + | histidine triad (HIT) protein Nham_2452 2713307 - 2712816 - | hypothetical protein Nham_2453 2714475 - 2713534 - | lytic transglycosylase, catalytic TERM 2487 2713908 - 2713919 + g 70 -7.2 -4.07568 | overlap 2713891 2713890 2713894 CCGGTGGCTGCGCTG GCGG TTTA CCGC TTTTGCCGGCGGCAA TERM 2488 2714646 - 2714628 - R 80 -9.5 -4.11371 | opp_overlap 2714639 GAATACGCGCTAAAA CCCCCGG CTCCT CCGGAGG ACAATACTTGTAGTT TERM 2489 2714668 - 2714703 + r 100 -19.3 -2.82933 | CTTGTAGTTCCGGAT TTTGACATTCGCTGC CAAACA GCAGCGAATGTCAAA TCTGCTCCATTAGCG rpsI 2715189 - 2714713 - | 30S ribosomal protein S9 rplM 2715656 - 2715192 - | 50S ribosomal protein L13 Nham_2456 2716236 - 2715808 - | phenylacetic acid degradation-related protein Nham_2457 2716434 - 2717018 + | CoA-binding TERM 2490 2717391 - 2717412 + G 71 -9.4 -3.68222 | GTCGTTCGTGTTCAA CGATGCCG ACCACG CGGCGTCG TTGTTCGGATTGCAG Nham_2458 2717275 - 2718552 + | O-acetylhomoserine aminocarboxypropyltransferase TERM 2491 2718699 - 2718685 - T 74 -7.1 -4.39002 | overlap 2718673 2718696 AAACGTTCTAGAAAA CGGCT CATAC AGCCG CCGCTTTTTTCCGTA Nham_2459 2719972 - 2718743 - | major facilitator transporter TERM 2492 2719827 - 2719799 - G 70 -7.4 -4.06502 | gap 1, overlap 2719802 CAGCGGCAAACGAAA CAACG-CGCCGGT GAGG ACGGGCGTCGCTG TGAGGAGACCGAACT TERM 2493 2720271 - 2720255 - R 90 -7.9 -4.91429 | opp_overlap 2720257, overlap 2720243 2720257 AAACCGGAAACAAAA GCTCCGG TCA CCGGATC TATCCGGCCGCCACG Nham_2460 2721440 - 2720271 - | cytochrome oxidase assembly Nham_2461 2721450 - 2721656 + | hypothetical protein Nham_2462 2721833 - 2723026 + | hypothetical protein Nham_2463 2725192 - 2723051 - | lipopolysaccharide biosynthesis TERM 2494 2724886 - 2724902 + g 72 -13.7 -2.73364 | CGACGGCTTCGGGAT CGAGCGC GTT GCGCTCG TCGTTACGCTCGCCA Nham_2464 2725542 - 2726249 + | polysaccharide export protein TERM 2495 2726562 - 2726579 + G 76 -9.8 -3.87815 | ATCCTTCATGGACAC GGCGCC AAGGCC GGCGCC TTTGTGCGGCTCAAG Nham_2465 2726253 - 2727386 + | glycosyl transferase, group 1 TERM 2496 2727871 - 2727881 + G 78 -4.6 -4.73614 | TGGGGCGGATGATCT CGTC CTG GGCG TTTGTTTTCCTGCTG Nham_2466 2727510 - 2729042 + | sugar transferase TERM 2497 2729824 - 2729797 - g 76 -10.5 -3.90291 | opp_overlap 2729797 2729821, overlap 2729799 AGTCCGTCAACGAAA CAGCGGTCGCG GCTGGT CACGACCGCGG TGATCGCGGCCGCCG TERM 2498 2729846 - 2729799 - g 75 -11.9 -3.54146 | gap 1, opp_overlap 2729797 2729821, overlap 2729797 TCCGTCAACGAAACA GCGGTCGCGGCTGGTCACGACC GCGGT GATCGCGGCC-GCCGTGATCGC GCTGTTGCTGGCGAT Nham_2467 2729077 - 2730342 + | hypothetical protein Nham_2468 2731536 - 2730358 - | saccharopine dehydrogenase TERM 2499 2731787 - 2731749 - R 100 -14.7 -3.97019 | opp_overlap 2731769 2731770 2731784, overlap 2731754 AGCAAGCGTAAAGAA GCA-TAGCGACGGACGGCG CTT CGCCGTCC-TCGCTGGTGC GAGGGTCCGCGCTCT TERM 2500 2731781 - 2731754 - R 91 -17.8 -3.06509 | gap 1, opp_overlap 2731769 2731770, overlap 2731749 GCGTAAAGAAGCATA GCGACGGACGGCG CTT CGCCGTCC-TCGC TGGTGCGAGGGTCCG Nham_2469 2732588 - 2732262 - | hypothetical protein Nham_2470 2732871 - 2734565 + | phage integrase Nham_2471 2734920 - 2734579 - | hypothetical protein Nham_2472 2735604 - 2735362 - | hypothetical protein Nham_2473 2736246 - 2736007 - | hypothetical protein TERM 2501 2736314 - 2736299 - R 100 -11.8 -5.5112 | opp_overlap 2736298 2736297 2736295 CTGAGCAACAAAAAA GCGCGG TTGC CCGCGC CATCTTTGCCGAGTA Nham_2474 2736662 - 2736357 - | hypothetical protein TERM 2502 2736725 - 2736696 - R 75 -5.5 -4.64861 | opp_overlap 2736697, overlap 2736697 2736713 CCTCGGGAAAAGAAA CCCCTCCGGGCAG GAGA CAACCGGGAGGGT CGTTGCGACGCGGCG Nham_2475 2737196 - 2736861 - | hypothetical protein TERM 2503 2736989 - 2736961 - G 84 -15.4 -3.28979 | opp_overlap 2736960 2736959 GAATACACAAGGGAA GCTATCGCGGTC TTATC GACCGCGATAAC GATTTGGACGCCTAC TERM 2504 2737146 - 2737103 - G 70 -11.6 -3.2285 | opp_overlap 2737103 2737103 2737143, overlap 2737098 ACAAACGCAATGTAA GCGGATCGCCGCCGTCGATC GTAA GATCGACCGCGACGAGGCCC CTTTCGGGTGGCTTA TERM 2505 2737494 - 2737477 - R 70 -4.9 -4.4874 | opp_overlap 2737480, overlap 2737471 GGCAAAAATCCAAAA CAAGTCA GTGC TGACTTA TCTTTGTTAAGACGC Nham_2476 2737903 - 2737658 - | hypothetical protein TERM 2506 2738066 - 2738052 - R 70 -4.2 -4.56358 | CAGAGTCATACAAAA CTGCTA TAA TGGCAG CTGATGAGAACCTGT TERM 2507 2738496 - 2738526 + r 70 -12 -2.70932 | overlap 2738499 TCTCTCTCTTCGGGA TAGGCACTTAGACT TGT GGTCTAGGTGCTTA TCCTTGGAGGGAGAA TERM 2508 2738499 - 2738523 + r 74 -11.5 -3.50853 | overlap 2738496 CTCTCTTCGGGATAG GCACTTAGACT TGT GGTCTAGGTGC TTATCCTTGGAGGGA TERM 2509 2738770 - 2738808 + r 100 -11.1 -5.40474 | gap 1, opp_overlap 2738775, overlap 2738771 2738776 GTGTGTCTCTCATCA GGGAA-GCCCCCGGGA TTTACTCC TCCCGGGGGTTTTCTC TTTTTTTGAACGCCT TERM 2510 2738771 - 2738806 + r 100 -14.8 -4.34482 | opp_overlap 2738775, overlap 2738770 2738776 TGTGTCTCTCATCAG GGAAGCCCCCGGGA TTTACTCC TCCCGGGGGTTTTC TCTTTTTTTGAACGC TERM 2511 2738776 - 2738801 + r 100 -13.3 -5.11475 | opp_overlap 2738775, overlap 2738771 2738770 CTCTCATCAGGGAAG CCCCCGGGA TTTACTCC TCCCGGGGG TTTTCTCTTTTTTTG Nham_2477 2741021 - 2738823 - | hypothetical protein TERM 2512 2740079 - 2740095 + g 73 -10.9 -3.55071 | CGATCTTATCGGCGA GCAAGTC CGG GACTTGC TTTAGGGCGCTATAG TERM 2513 2740518 - 2740536 + g 72 -4.4 -4.63527 | overlap 2740520 TGCAAGCCCGGTGTT GCCGGACA GGT TGCCCGCC TTTTTCAACTCGTCG TERM 2514 2740941 - 2740962 + g 72 -2.3 -4.8143 | gap 1, overlap 2740940 2740943 GACGTGTCTGGTTAG GCTGGATG TTTCGTT CATCC-GC TTTTTGAATTCTTCC Nham_2478 2741359 - 2741018 - | hypothetical protein Nham_2479 2741760 - 2741356 - | Phage protein, HK97, gp10 TERM 2515 2741711 - 2741741 + g 72 -2.4 -4.81212 | overlap 2741712 TCTTCTGTCAGTTTG TCGGGCAGGCTTTC GAG GTAAGCTTGCAAGG TTTTATTATCGTCGC Nham_2480 2743394 - 2741757 - | phage terminase Nham_2481 2743758 - 2743366 - | phage terminase, small subunit, putative, P27 Nham_2482 2744072 - 2743755 - | hypothetical protein Nham_2483 2744482 - 2744069 - | hypothetical protein Nham_2484 2744763 - 2744482 - | phage protein Nham_2485 2745428 - 2744991 - | hypothetical protein Nham_2486 2745763 - 2745428 - | HNH endonuclease Nham_2487 2746341 - 2745763 - | hypothetical protein Nham_2488 2746741 - 2746355 - | hypothetical protein TERM 2516 2746771 - 2746796 + r 72 -6.7 -4.27316 | opp_overlap 2746772 2746773, overlap 2746772 TTCAAGTTTGATGAA ATGGGAGCGGC CTTA GCCGCTCCGGG TTTTCGGTTAGACCG Nham_2489 2747976 - 2746804 - | phage major capsid protein, HK97 Nham_2490 2748475 - 2747978 - | peptidase U35, phage prohead HK97 Nham_2491 2748977 - 2748651 - | hypothetical protein Nham_2492 2750161 - 2748974 - | Phage portal protein, HK97 TERM 2517 2750610 - 2750599 - R 70 -3.6 -4.56597 | CGGCCGTCCCAAAAA GGAC GGCA GCCC CTTAACATGCTGCAA TERM 2518 2750779 - 2750805 + r 100 -18.7 -4.18018 | opp_overlap 2750776 2750773 2750795 2750796 GCGAGATAACATCGG GGCGCGGCGGG CAAAA CTCGCCGCGCC TTTTCGCTGCGACAA Nham_2493 2751507 - 2750857 - | hypothetical protein Nham_2494 2752151 - 2751672 - | hypothetical protein TERM 2519 2752772 - 2752802 + H 76 -11.8 -3.36492 | opp_overlap 2752759 2752772 TACGACGACGAGAAG CGTGCGGCGCTCGA CGC TTGGGCGCAGTACG TTGTCAAATTGCAGA Nham_2496 2752956 - 2753339 + | hypothetical protein TERM 2520 2753781 - 2753791 + F 74 -2.4 -4.96848 | opp_overlap 2753781 GTGGCGAATAAAAAC CCAC CAA GCGG TTTTTCTATCCCGAA TERM 2521 2754204 - 2754179 - f 73 -12.5 -2.72144 | opp_overlap 2754180, overlap 2754178 GCACCGGCTTCAAAG TCCCCGCCAGC CTGG ACTGGCGGGGT TTTCTATTTCTGCCG TERM 2522 2754180 - 2754203 + F 100 -15.3 -4.84918 | opp_overlap 2754179 2754178 CACCGGCTTCAAAGT CCCCGCCAG CCTGGA CTGGCGGGG TTTTCTATTTCTGCC Nham_2497 2754341 - 2754898 + | putative cytochrome P460 Nham_2499 2755388 - 2755738 + | ISGsu3, transposase Nham_2500 2755773 - 2756498 + | transposase, IS4 TERM 2523 2756941 - 2756981 + F 87 -6.9 -4.97405 | overlap 2756942 2756944 CCCGCCGCAAACTTC CCAGCGATCCGGTAC CTATCGGAGTC GTACCGGATCGCTCC TTTCTTTTTCTGCAT TERM 2524 2756942 - 2756980 + F 71 -10.4 -3.56816 | overlap 2756941 2756944 CCGCCGCAAACTTCC CAGCGATCCGGTAC CTATCGGAGTC GTACCGGATCGCTC CTTTCTTTTTCTGCA TERM 2525 2756944 - 2756978 + F 79 -13 -3.34078 | overlap 2756942 2756941 GCCGCAAACTTCCCA GCGATCCGGTAC CTATCGGAGTC GTACCGGATCGC TCCTTTCTTTTTCTG TERM 2526 2757277 - 2757303 + F 85 -10.1 -4.36914 | opp_overlap 2757257 ACGTTACTAGCGTTA CGCCCCGGC AATTTGTAA GCTGGGGCG TTTTCTACAGAGCGC TERM 2527 2758529 - 2758501 - f 81 -12.5 -3.58536 | gap 1 AAAGGCATTGCGAAA TGGCCCCCGGCT TGATGG AG-CGGGGGCCA TGCGATAAGCGCCGT Nham_2503 2758595 - 2758960 + | hypothetical protein TERM 2528 2759083 - 2759069 - f 77 -2.1 -5.12971 | gap 1 AACAGCCAAGAAAAA GACCGC AAAA GCG-TC GAAGTTGCCGATAGC Nham_2504 2759088 - 2759468 + | hypothetical protein TERM 2529 2760795 - 2760761 - f 79 -12.9 -3.45571 | gap 1, overlap 2760763 2760786 2760788 CGCTCGAAACAGTAA GAGCCGCGCCATCCAC CGAA GTGAACAGCGCGGC-C AGTTGGCCCGAGCGG TERM 2530 2760794 - 2760763 - f 90 -16.6 -3.29837 | overlap 2760761 2760786 2760788 CTCGAAACAGTAAGA GCCGCGCCATCCAC CGAA GTGAACAGCGCGGC CAGTTGGCCCGAGCG Nham_2506 2760904 - 2761269 + | PRC-barrel TERM 2531 2761322 - 2761294 - f 75 -10.1 -3.6682 | opp_overlap 2761298, overlap 2761295 2761298 CTTCAGTTACTGAAA CTTACCCGCCGGG ATG CCCGGCGGGTTTT GTGCGTGGCCGCAAT TERM 2532 2761321 - 2761295 - f 76 -13.6 -2.79878 | opp_overlap 2761298, overlap 2761294 2761298 TTCAGTTACTGAAAC TTACCCGCCGGG ATG CCCGGCGGGTTT TGTGCGTGGCCGCAA TERM 2533 2761318 - 2761298 - f 95 -19.7 -2.66451 | opp_overlap 2761298, overlap 2761295 2761294 AGTTACTGAAACTTA CCCGCCGGG ATG CCCGGCGGG TTTTGTGCGTGGCCG TERM 2534 2761298 - 2761318 + F 100 -19.7 -4.42386 | opp_overlap 2761295 2761294 2761298 AGTTACTGAAACTTA CCCGCCGGG ATG CCCGGCGGG TTTTGTGCGTGGCCG TERM 2535 2762056 - 2762036 - f 70 -2.5 -4.72272 | opp_overlap 2762044, overlap 2762038 CGCGCCCAGCAAAAA CTTGGGT TCCTGTT ACCCAGG TTGTTACCCTTGGAC TERM 2536 2763077 - 2763095 + G 84 -16 -3.05844 | GCCTCGACAGCGCCG GCGGCGAG GAT CTCGCCGC TATTCAACTGCGGCA Nham_2508 2762434 - 2763285 + | RNA methyltransferase TrmH, group 3 TERM 2537 2763295 - 2763332 + T 83 -9.8 -4.40358 | opp_overlap 2763299, overlap 2763298 2763299 CGCTGACGGCGCGCG AAAACGCCCGCTCGCA TGGCGT TGCGAACGGGCGCTTG TTTTCTCGGATAAGT TERM 2538 2763298 - 2763329 + T 90 -11.5 -4.32067 | opp_overlap 2763299, overlap 2763295 2763299 TGACGGCGCGCGAAA ACGCCCGCTCGCA TGGCGT TGCGAACGGGCGC TTGTTTTCTCGGATA TERM 2539 2763299 - 2763328 + T 87 -15 -3.18517 | opp_overlap 2763299, overlap 2763298 2763295 GACGGCGCGCGAAAA CGCCCGCTCGCA TGGCGT TGCGAACGGGCG CTTGTTTTCTCGGAT TERM 2540 2763328 - 2763299 - T 100 -17.2 -4.07885 | opp_overlap 2763298 2763295 2763299 GACGGCGCGCGAAAA CGCCCGCTCGCA TGGCGT TGCGAACGGGCG CTTGTTTTCTCGGAT Nham_2509 2763926 - 2763354 - | hypothetical protein Nham_2510 2764439 - 2763993 - | hypothetical protein Nham_2511 2766118 - 2765357 - | hypothetical protein Nham_2512 2766220 - 2767173 + | hypothetical protein Nham_2513 2767164 - 2767577 + | hypothetical protein Nham_2514 2767574 - 2768524 + | hypothetical protein TERM 2541 2768622 - 2768648 + T 72 -5.8 -4.52897 | opp_overlap 2768622, overlap 2768624 GCCCACCCGAGAGGA TTGAGACACACG TGG CGTCGGTCTCGA TTTGTTCTTGATTCT Nham_2516 2770292 - 2769198 - | tISRso5; ISRSO5-transposase protein TERM 2542 2771090 - 2771069 - g 83 -7.3 -4.58395 | CGTAGGCGGCAAAAA CACCACG CCTGAAAT CGTGGTG AGAAAGGTTGCTCAC TERM 2543 2771329 - 2771309 - g 81 -2.6 -5.18726 | gap 1, opp_overlap 2771323 2771324, overlap 2771311 GCGCGACAAGAAAAA TG-TTGCAC TATT GCGCAAGCA GGGCTGGCTTGTTCT Nham_2517 2771007 - 2771450 + | DNA mismatch endonuclease vsr TERM 2544 2771777 - 2771791 + T 100 -8.6 -4.97402 | opp_overlap 2771787, overlap 2771787 AATGCTGTAGAGGCG CTCCAT CAG ATGGAG TTTTTCTCCATTTTG Nham_2519 2772575 - 2772078 - | hypothetical protein Nham_2520 2772984 - 2772661 - | hypothetical protein Nham_2521 2773064 - 2773324 + | XRE family transcriptional regulator Nham_2522 2773690 - 2773355 - | hypothetical protein Nham_2523 2773926 - 2773693 - | hypothetical protein Nham_2524 2774735 - 2773929 - | hypothetical protein Nham_2525 2774828 - 2775424 + | hypothetical protein Nham_2526 2776159 - 2775719 - | hypothetical protein TERM 2545 2776104 - 2776060 - G 76 -9.2 -4.07568 | gap 2, overlap 2776061 2776064 GGCTCGGTTTCAAAA GGGACGGCCATCGTGCCGGTGG CAG CCACAGG-ACGCCGGCCG-CCT TGCAACGGAAAGTGG TERM 2546 2776103 - 2776061 - G 71 -12.7 -3.04398 | gap 2, overlap 2776060 2776064 GCTCGGTTTCAAAAG GGACGGCCATCGTGCCGGTGG CAG CCACAGG-ACGCCGGCCG-CC TTGCAACGGAAAGTG TERM 2547 2776101 - 2776064 - G 72 -14.1 -2.74605 | gap 1, overlap 2776061 2776060 CGGTTTCAAAAGGGA CGGCCATCGTGCCGGTGG CAG CCACAGG-ACGCCGGCCG CCTTGCAACGGAAAG TERM 2548 2776416 - 2776455 + r 95 -13.7 -4.08767 | gap 3, overlap 2776417 CGCTGACTGACTGCG C-CACGCG-CGCG-AGGCCC ACG GGGCCTGCGTGTCGCGTGTG TTTTCCAAGCGTGAA TERM 2549 2776417 - 2776453 + r 100 -17.4 -3.6422 | gap 2, overlap 2776416 GCTGACTGACTGCGC CACGCG-CGCG-AGGCCC ACG GGGCCTGCGTGTCGCGTG TGTTTTCCAAGCGTG TERM 2550 2776667 - 2776638 - R 73 -12.1 -3.06133 | opp_overlap 2776630 GAATTTCTTAGCGAA GCTGGTGGACGAC GACG GCCATCCACCGGC TGTCGCCCCTGTCTA Nham_2527 2778950 - 2776680 - | hypothetical protein TERM 2551 2776817 - 2776790 - G 74 -9.8 -3.76224 | opp_overlap 2776789 2776790 TGCGCACGGACCAAA GCTGATAGGCAG GACG CTGCCTGTCGGC CTTGGTGTAACGGGC TERM 2552 2776790 - 2776817 + g 74 -14.2 -2.55351 | opp_overlap 2776790, overlap 2776789 TGCGCACGGACCAAA GCTGATAGGCAG GACG CTGCCTGTCGGC CTTGGTGTAACGGGC TERM 2553 2778171 - 2778198 + g 82 -14.2 -3.31157 | GCCGTTGGTCGCATG GTGGCAGGCCAT CATC ATGTCCTGCCAC TTCCTCTGGTCCTTG TERM 2554 2778896 - 2778924 + g 100 -17.5 -3.68359 | overlap 2778890 2778913 TCTCCCGAGCACCTG CGGGCGCATCG ATCTCCC CGATGCGCCCG TTCTCGTTTTCCAGA Nham_2528 2779186 - 2778947 - | hypothetical protein Nham_2529 2780504 - 2779377 - | phage integrase Nham_2530 2781599 - 2781390 - | prevent-host-death protein Nham_2531 2790399 - 2781862 - | glycosyltransferase 36 TERM 2555 2783291 - 2783270 - G 74 -5 -4.56597 | opp_overlap 2783282 CTCGCCTGGTAAAAA GCCGAGCG GGCGAG CACGCGGC ACGCGAGCGTCTGAT TERM 2556 2783785 - 2783770 - G 70 -11.8 -3.21099 | CTCGGTCACGATGAA CGGCGC GGAG GCGCCG CGCGACGTGCCAAGC TERM 2557 2784195 - 2784241 + g 71 -10.9 -3.51934 | overlap 2784194 CGTTGATCCAGGGCG CGGGCGAG-ATGCGGGCACCGTC GAG GACGGT-TACGTATTCACGCCCG TCTTTGTCAAAGCCG TERM 2558 2784497 - 2784483 - G 74 -12.8 -3.38522 | overlap 2784481 CACGGAGCGTAAAGA CCGCGC CTT GCGCGG GAATGTGGCCGACGC TERM 2559 2785594 - 2785584 - G 75 -3.2 -4.82901 | TGTCCTTGAGAAAAA GGAA CGA TCCC CAGTCGTCGCGAGTC TERM 2560 2786791 - 2786806 + g 73 -8.2 -4.07568 | overlap 2786785 GGGCATGATGCTGCG GGCGGC CTCG GCTGCC TTTTCGGCAAGCCGG TERM 2561 2787443 - 2787417 - G 71 -8.7 -3.84451 | gap 1, overlap 2787412 CCGGCGAAATCGAAA GCCGGCGCGC GATCGGCG GCGC-CCGGC TGATCCGGAAGGCGA Nham_2532 2791163 - 2790726 - | hypothetical protein TERM 2562 2790820 - 2790833 + g 71 -9.5 -3.71848 | overlap 2790818 AGAAGTTCTTCACCC GCCGC TTTG GCGGC TTGTTCATCGGCAAA TERM 2563 2791089 - 2791078 - G 81 -4.4 -5.00884 | opp_overlap 2791078, overlap 2791081 ATCGTCCGGAAAAAA GGAT GCCG ATCC TGCATTCGCGATTCC TERM 2564 2791329 - 2791304 - R 78 -8.2 -4.51174 | opp_overlap 2791304 2791307 GCACGATAAGCAAAA GACCGCCGGC TTTACG GCTGGCGATC TTCATCTCACTCCGA Nham_2533 2791635 - 2791426 - | cold-shock DNA-binding domain-containing protein TERM 2565 2791668 - 2791690 + r 79 -12.7 -3.18681 | opp_overlap 2791660 2791661 CGCGAAAGCGCGTTC GCTCGCACG ACCTC CGTGCGGGC TTGATCGAGTTCAAC Nham_2534 2792914 - 2791844 - | signal transduction histidine kinase TERM 2566 2792389 - 2792421 + g 74 -9.1 -3.92602 | overlap 2792392 CCTCCGATTCCACAG TCTTCGCCTTCATCA AGA TGATGCTGGCGATGA TTTGTAGGCTGTTGG Nham_2535 2793199 - 2793885 + | cyclic nucleotide-binding domain-containing protein TERM 2567 2793919 - 2793950 + T 80 -14.4 -2.70932 | TGATGCTCTGCTATG GCGTGATAGCGACC TTCA GGACGCCATCACGC TGGTTGGCGAAGAGA Nham_2536 2794987 - 2793914 - | zinc-binding alcohol dehydrogenase TERM 2568 2794925 - 2794951 + g 71 -8.6 -3.85817 | GCCGATATCGGGAAT GGCCTTCTCGTC GAG GACGATGCGGCC TTTCTCCACGAAAAT Nham_2537 2796284 - 2795526 - | transcriptional regulator-related protein TERM 2569 2796030 - 2796011 - G 74 -5.6 -4.46514 | opp_overlap 2796021 2796024, overlap 2796012 2796021 2796023 ACCGATTGAAAGAAA CGCGACTA TACA TGGCCGCG AAGAGGCCGAATGCG Nham_2538 2796630 - 2798489 + | ABC transporter related Nham_2539 2798795 - 2798547 - | hypothetical protein TERM 2570 2798939 - 2798923 - g 70 -12.3 -3.21099 | CGGCGTCATCACCAA GACGGAC GTG GTCCGTC AGATCGGACGGTGCG Nham_2540 2798798 - 2799208 + | signal-transduction protein TERM 2571 2800264 - 2800293 + G 72 -12.1 -3.28712 | opp_overlap 2800264 2800265, overlap 2800265 GGCAACCCTGGATAA GCGCGATGGCGAC AAAT GTCGCAATCGCGG TTCTGGCCGCGACCC TERM 2572 2800293 - 2800264 - g 72 -12.1 -3.31322 | opp_overlap 2800264 2800265, overlap 2800265 GGCAACCCTGGATAA GCGCGATGGCGAC AAAT GTCGCAATCGCGG TTCTGGCCGCGACCC TERM 2573 2800292 - 2800265 - g 77 -15.6 -2.58579 | opp_overlap 2800265 2800264, overlap 2800264 GCAACCCTGGATAAG CGCGATGGCGAC AAAT GTCGCAATCGCG GTTCTGGCCGCGACC TERM 2574 2800265 - 2800292 + G 77 -15.6 -2.57132 | opp_overlap 2800264 2800265, overlap 2800264 GCAACCCTGGATAAG CGCGATGGCGAC AAAT GTCGCAATCGCG GTTCTGGCCGCGACC Nham_2541 2799693 - 2800742 + | fatty acid desaturase guaA 2802875 - 2801253 - | bifunctional GMP synthase/glutamine amidotransferase protein Nham_2543 2804323 - 2803022 - | Fmu (Sun) TERM 2575 2803073 - 2803055 - G 80 -5.8 -4.72986 | opp_overlap 2803060 2803065 GACGCTGATGAAAAA CCCGTCCG TTC CGGTCCGG CGCGGTGTCATCAGC TERM 2576 2803155 - 2803124 - G 79 -11 -3.85698 | gap 1, opp_overlap 2803099 2803097, overlap 2803145 2803147 TGTTGCCGCGAGAAA CT-CGTCCGTCTTGT CCC ACAACACGGACGCAG CCTGCGCCGGCGGTG Nham_2544 2804771 - 2804352 - | hypothetical protein Nham_2545 2805425 - 2804808 - | hypothetical protein Nham_2546 2807170 - 2805674 - | inositol-5-monophosphate dehydrogenase TERM 2577 2806577 - 2806597 + g 74 -9.7 -3.92373 | opp_overlap 2806563 ACCGACGCAGCGATA CTGCTCGTC GAC GACCAGCAG TTTCTCGATGCGATG TERM 2578 2806609 - 2806625 + g 81 -6.6 -4.8143 | GCAGTTTCTCGATGC GATGCT TGTGC AGCATC TTTTTGGCTTCTTCC Nham_2547 2807767 - 2807519 - | hypothetical protein TERM 2579 2808701 - 2808719 + G 70 -8 -3.96624 | GTTCCTGTTCCGCCT CGGCGTCG GTG CGCTGCCG TTTCTGCTGCCACTC Nham_2548 2807886 - 2809358 + | EmrB/QacA family drug resistance transporter Nham_2549 2810106 - 2809420 - | ribosomal RNA methyltransferase RrmJ/FtsJ TERM 2580 2810168 - 2810156 - R 78 -9.1 -4.24149 | opp_overlap 2810156, overlap 2810153 CCATCAAAAGAACAA TCCGC AAT GCGGA TGTCATGATCGTGTT Nham_2550 2811237 - 2810242 - | Ppx/GppA phosphatase Nham_2551 2811608 - 2812108 + | hypothetical protein TERM 2581 2812159 - 2812170 + G 76 -7.2 -4.37886 | overlap 2812158 2812157 TTGCGCTGACGTTTG GCGG CACG CCGC TTTTGTCCGGCGTCG TERM 2582 2812504 - 2812486 - g 74 -11.6 -3.53012 | TGTCCGGCGGCGAAA GCCGGCGC GCG GCGCTGGC GCGGGTGCTGGCGCC Nham_2552 2812113 - 2813927 + | ABC transporter related Nham_2553 2815174 - 2813945 - | HI0933-like protein TERM 2583 2814465 - 2814518 + g 72 -3.8 -4.57569 | gap 3 CCTTCAACGCCGGTG CGT-GTGATGACGGCTTCGCCACGCAC CGC GTGCGAGCCG-A-CCGACAGCGCGACG TTTTTCAGCGGCTGA Nham_2554 2815660 - 2815181 - | MaoC-like dehydratase Nham_2555 2817397 - 2815664 - | AMP-dependent synthetase and ligase Nham_2556 2818293 - 2817394 - | 3-hydroxyisobutyrate dehydrogenase TERM 2584 2817479 - 2817452 - G 79 -11.2 -3.87075 | opp_overlap 2817453 2817472 2817473 ATGACGCCCGAGAAA TCGACCCCGCCG TTTC CGGCCGCGTCGA ACGCCTTGTAGATGT Nham_2557 2819399 - 2818326 - | enoyl-CoA hydratase TERM 2585 2818815 - 2818797 - G 70 -11.6 -3.20382 | opp_overlap 2818796 2818800 GCCGAGATCGACCAA CGCCTCGC GCA GCGCGGCG AGTTTTCGCGACGGA TERM 2586 2818800 - 2818817 + g 70 -7.7 -4.07568 | gap 1, opp_overlap 2818797, overlap 2818796 GAGATCGACCAACGC CTCG-CGC AGC GCGGCGAG TTTTCGCGACGGAAC Nham_2558 2820541 - 2819396 - | acyl-CoA dehydrogenase-like TERM 2587 2820119 - 2820163 + g 75 -14.1 -3.05596 | GTGATCGCCGTCGCG CACCGCGCGGGTTCGCAAGGC TGC GGCGTCCGAACCCGCGCCGGG TTCGGTCAGACAGTA TERM 2588 2820362 - 2820345 - G 83 -9.1 -4.31692 | AACGCAGCATCAAAA CGGCTCA GCGC CGAGCCG CCGACATCGTCGCGG Nham_2559 2822066 - 2820573 - | methylmalonate-semialdehyde dehydrogenase Nham_2560 2823413 - 2822244 - | acetyl-CoA acetyltransferase Nham_2561 2824362 - 2823769 - | nuclear protein SET TERM 2589 2823874 - 2823892 + g 83 -11.6 -4.09685 | overlap 2823889 CAGCTTTTTGCCGTT GCGCGCGG CCC CGGCGCGC TTTTCGGCCCTCGCC TERM 2590 2825243 - 2825217 - g 76 -8.7 -4.11216 | gap 1, overlap 2825221 CGCCGACCTGGAAAA CGAAGCGCTCTC GCCG GAGAGCGCG-CG CATCATCCGCCCCGT TERM 2591 2825240 - 2825221 - g 81 -13.6 -3.67622 | overlap 2825217 GACCTGGAAAACGAA GCGCTCTC GCCG GAGAGCGC GCGCATCATCCGCCC TERM 2592 2825525 - 2825540 + G 71 -4.6 -4.41348 | opp_overlap 2825497, overlap 2825526 AGATCGACCCTACCG GCCTCG AGTC CGAGGG TTTGTTTCACGCCGA Nham_2562 2824762 - 2825703 + | hypothetical protein Nham_2563 2825843 - 2826313 + | hypothetical protein TERM 2593 2826521 - 2826552 + G 83 -9.2 -4.25104 | overlap 2826518 2826521 GCTGCTGTTCATCTC GGCGGGCAGCCTGC ACTG GCCGGCCGCCTGGC TTTTCCTGGCGACGC Nham_2564 2826435 - 2827127 + | isoprenylcysteine carboxyl methyltransferase Nham_2565 2827159 - 2827518 + | glutathione-dependent formaldehyde-activating, GFA TERM 2594 2827671 - 2827650 - T 82 -6.5 -4.78572 | gap 1, opp_overlap 2827652 2827654, overlap 2827652 CGCGAAGCAATAAAA CAGC-CCGGC GCC GCCGGTGCTC TTGAGATCGTTCTGG Nham_2566 2828309 - 2827626 - | hypothetical protein TERM 2595 2827669 - 2827652 - G 76 -9.1 -4.00694 | gap 1, opp_overlap 2827652 2827654, overlap 2827650 CGAAGCAATAAAACA GC-CCGGC GCC GCCGGTGC TCTTGAGATCGTTCT TERM 2596 2828458 - 2828423 - R 100 -17.7 -3.75153 | opp_overlap 2828429, overlap 2828429 TTCGTTCAACGCAAA CAAAAAGGCGCCACG GGTTGT CGTGGCGCCTTCTCG ATTAGCCAAGGGTCG TERM 2597 2828429 - 2828452 + r 89 -16 -3.41878 | opp_overlap 2828429 2828423 CAACGCAAACAAAAA GGCGCCACGG GTTG TCGTGGCGCC TTCTCGATTAGCCAA TERM 2598 2828452 - 2828429 - R 100 -15.3 -5.33026 | opp_overlap 2828429, overlap 2828423 CAACGCAAACAAAAA GGCGCCACG GGTTGT CGTGGCGCC TTCTCGATTAGCCAA Nham_2567 2829417 - 2828479 - | import inner membrane translocase, subunit Tim44 TERM 2599 2828957 - 2828906 - G 76 -10.7 -3.75629 | gap 1 GATGCCGAAGCGAAA CCGAAGCCGCTGCGGGGGCTCGCC TGAGC AGCGGGACCCGGC-GCAGCTCCAG CATAAGCGGGCGCAT TERM 2600 2829142 - 2829121 - G 76 -13.7 -3.18264 | gap 1, overlap 2829122 TCCCGCACCGAGGAA GC-CGGCGGC AAG GCCGCCGAGC ATGCCCATGCCGGGC TERM 2601 2829140 - 2829122 - G 71 -13.8 -2.50816 | overlap 2829121 CCCGCACCGAGGAAG CCGGCGGC AAG GCCGCCGA GCATGCCCATGCCGG Nham_2568 2829909 - 2829565 - | hypothetical protein TERM 2602 2829723 - 2829711 - G 91 -9.1 -4.58663 | opp_overlap 2829678 ATGACGGGGCAAAAA CCCGT TCA ACGGG CCGGCTGTCGTCGTA Nham_2569 2830032 - 2831339 + | adenylosuccinate lyase Nham_2570 2832096 - 2831503 - | cytochrome B561 TERM 2603 2831533 - 2831545 + g 74 -4.8 -4.62069 | opp_overlap 2831522 2831521, overlap 2831521 2831518 GAAGCGACTCCCACT GGGA GGCGA TCCC TTTTTGCCCTCGCCC TERM 2604 2831667 - 2831694 + g 71 -5.5 -4.32579 | overlap 2831669 AAGCCAGCCAGATGT GCCAGTGCTCG AAGAAA CGGGCATTGTC TTTATTCTCGGATGT TERM 2605 2832330 - 2832347 + H 72 -5.5 -4.42788 | opp_overlap 2832322, overlap 2832324 ACCAATACCGATTAC CGGTCGA CCGG TGGACCG TTTTATGGCGTTGGC Nham_2571 2832352 - 2832960 + | hypothetical protein TERM 2606 2833030 - 2833040 + F 71 -6.8 -4.19238 | overlap 2833025 CGTTTGAGGCCGCGC TCGC GCC GCGA TTTTCCGGTTAACGC Nham_2572 2833281 - 2833901 + | transglutaminase-like cysteine peptidase, BTLCP TERM 2607 2833958 - 2833994 + T 91 -12.9 -4.07885 | GTCCCAGACCGGTTC GCGCGCGGCCAGCCT CCCCCAA GGGCTGGCCGCACCC TTTTCAGGGCAGCTC Nham_2573 2834580 - 2834116 - | peptidylprolyl isomerase Nham_2574 2835178 - 2834723 - | hypothetical protein Nham_2575 2835845 - 2835315 - | carbonic anhydrase TERM 2608 2835818 - 2835792 - G 73 -2.9 -4.72272 | gap 1, overlap 2835793 GTCGGCGATGAAAAA GCGTCCG-CTTT TCGG AAGGTCGGGCGC CTGCCCGTCGAGTTC Nham_2576 2836259 - 2835885 - | hypothetical protein Nham_2577 2836424 - 2837137 + | hypothetical protein TERM 2609 2837201 - 2837181 - T 81 -12.6 -3.61103 | opp_overlap 2837182, overlap 2837160 CAACGTGAGGCTAAA GCGCGAAG CGGGT CTTCGCGC AGACATCCCGGCCAT Nham_2578 2837444 - 2837226 - | hypothetical protein Nham_2579 2838378 - 2837557 - | serine O-acetyltransferase TERM 2610 2837914 - 2837889 - G 71 -6.1 -4.2828 | gap 1, opp_overlap 2837889, overlap 2837866 CGTGATCGAGGAAAA TGCCACGGCCGA TTT TCG-CCGCGGGA TTGATGTCGGTCTGG Nham_2580 2838605 - 2840041 + | hypothetical protein Nham_2581 2840779 - 2840027 - | alpha/beta hydrolase fold TERM 2611 2840177 - 2840204 + g 86 -16.4 -3.21099 | gap 1 CGCGATCTCATCCTT GGTGCCGACCGCT ATC AGCG-TCGGCACC TTGATGCTGGCGACC TERM 2612 2840846 - 2840876 + r 78 -8.9 -4.14392 | gap 1, opp_overlap 2840841 2840837, overlap 2840850 TGAGAAGTTATGACG GCACGGCGGACTGC CGCC GCAG-CCGCCTGGC TTTTGAACGTTGCAG Nham_2582 2841941 - 2840838 - | hypothetical protein TERM 2613 2841605 - 2841630 + g 75 -3.1 -4.84311 | opp_overlap 2841593 2841606, overlap 2841592 2841606 CCAGCCCGGCGAGGA ATCTCCCGGCC ATGT GTCCGGTAGAA TTTTCTTCTCTGACG Nham_2583 2842216 - 2842461 + | hypothetical protein TERM 2614 2843544 - 2843505 - g 79 -13.4 -3.48276 | gap 1, opp_overlap 2843512 TTGCGCGCTACACAA GCTTACGCC-GCGCGCGCG TCG CGCGCGTGCAGGCGCTCGC GCAACGGAACGGCCG Nham_2584 2842469 - 2843671 + | monooxygenase, FAD-binding TERM 2615 2843775 - 2843732 - T 93 -13.6 -3.81951 | opp_overlap 2843747 TCGGAGATCAGTAAA CAGCGCTGCCGGAGCGCCTC GGTG GCGGCGCACCGCGTGCGCTG CTCGCCGGGGCTGTG TERM 2616 2843747 - 2843786 + T 100 -22.2 -2.90075 | gap 1, opp_overlap 2843732 CAGCGCTGCCGGAGC GCCTCGGTG-GCGGCGCAC CGC GTGCGCTGCTCGCCGGGGC TGTGGTTGCGGCGGG Nham_2585 2844155 - 2843724 - | twin-arginine translocation pathway signal TERM 2617 2844117 - 2844077 - G 75 -11.8 -3.66178 | gap 2, overlap 2844079 TGGCGCAACCGGAAA GACCGCCAGCCGCGACCAGC AAC GC-GATCGCGGC-GGCGGAT AGCCACTGACGACGG TERM 2618 2844115 - 2844079 - G 95 -18.8 -3.41222 | gap 2, overlap 2844077 GCGCAACCGGAAAGA CCGCCAGCCGCGACCAGC AAC GC-GATCGCGGC-GGCGG ATAGCCACTGACGAC Nham_2586 2845520 - 2844264 - | peptidase M29, aminopeptidase II Nham_2587 2845851 - 2846243 + | hypothetical protein Nham_2588 2846912 - 2846307 - | DSBA oxidoreductase TERM 2619 2846983 - 2847021 + r 100 -10.5 -5.45802 | gap 2, opp_overlap 2847009 TCAACCGTCGCTAGA GCT--ATCCCGGCTTTGAT GGA ATCAAAGCCGGGCTCCAGC TTTTTGTTTTGACGC Nham_2589 2847782 - 2847156 - | hypothetical protein TERM 2620 2847810 - 2847826 + r 73 -12.3 -3.02144 | opp_overlap 2847787 CCCGTCCCGGACGCG GCGCAAC GCA GTTGCGC TGTTCCGCAGAGTCG Nham_2590 2848396 - 2847890 - | xanthine-guanine phosphoribosyltransferase TERM 2621 2848515 - 2848469 - R 70 -12.4 -2.79183 | gap 3, opp_overlap 2848467 2848465 CCCAGCCTCATCATA TCCGCAT-TCCGGACCGGCG-CG CGAG CGACGCCGG-CCGGACAAGCGAA GGTCGGTTTACTGCG Nham_2591 2849263 - 2848523 - | molybdopterin binding domain-containing protein Nham_2592 2849874 - 2849575 - | hypothetical protein TERM 2622 2850074 - 2850058 - H 72 -5.2 -4.41241 | opp_overlap 2850049, overlap 2850073 TAAAGTTCGACAAAA TGTTGA TAAAT TCAACA CTGGCAGCGACTTAC TERM 2623 2850180 - 2850170 - H 76 -3.2 -5.02074 | TGAGTTCCTAAAAAA TCCG CTT CAGA CCCTTGTCCGCCTCT TERM 2624 2850408 - 2850398 - g 83 -6.8 -4.86621 | overlap 2850399 2850400 ACCGTCAAGGAAAAA CCCT CGC AGGG CGAAATCGTCGCCGT groES 2850296 - 2850613 + | co-chaperonin GroES TERM 2625 2850987 - 2850966 - g 74 -9.5 -3.90112 | overlap 2850971 CCGTCGCCAAGGAAA TCGAACTCG AGGA CAAGTTCGA GAACATGGGCGCACA TERM 2626 2851997 - 2851957 - g 86 -16.1 -3.19246 | GGAAGTCGAAGTCAA GGAGCGCAAGGATCGCGTC GAT GACGCGATGCATGCGACCC GCGCCGCGGTCGAGG groEL 2850788 - 2852428 + | chaperonin GroEL TERM 2627 2852458 - 2852479 + T 100 -17.3 -5.24647 | opp_overlap 2852458 CAATCAGAATACAAA GGGCGCGGT GCGA ACCGCGCCC TTTTGTTTTGTGTAT TERM 2628 2852479 - 2852458 - T 100 -17.3 -4.30911 | opp_overlap 2852458 CAATCAGAATACAAA GGGCGCGGT GCGA ACCGCGCCC TTTTGTTTTGTGTAT Nham_2595 2853130 - 2852681 - | glyoxalase/bleomycin resistance protein/dioxygenase Nham_2596 2853456 - 2854565 + | transposase, IS4 Nham_2597 2856289 - 2854793 - | glycosyl transferase family protein TERM 2629 2856294 - 2856256 - G 76 -11 -3.79906 | gap 2, opp_overlap 2856256 GGACCGTGAGAACAA CGGCG-CGGG-CGGACCG CGTCC CGGTCAGACCCATCGCCG TGCTATCGCCTGCGC Nham_2598 2857427 - 2856297 - | dolichyl-phosphate beta-D-mannosyltransferase TERM 2630 2856920 - 2856903 - G 73 -3.3 -4.77036 | gap 1 GCGGATCATGAAAAA GCCG-CTC ATG GGGTCGGC GATCTCGATGTGCAG TERM 2631 2857017 - 2857051 + g 71 -10.7 -3.53012 | gap 1, opp_overlap 2857021, overlap 2856998 2857022 GCTGCCGCCTTCGAT GTAACGGCTGCCGACC ACGA GGTCGGCGG-CGTCGC TTTCCAGAAGCGCGA TERM 2632 2857741 - 2857755 + G 83 -9.2 -4.36914 | overlap 2857738 GCGGCTGGACCTTCG CGCCGT GGC GCGGCG TTTTCTACCCCGACA Nham_2599 2857689 - 2858492 + | hypothetical protein Nham_2600 2858671 - 2859423 + | hypothetical protein Nham_2601 2861106 - 2859502 - | molybdopterin binding domain-containing protein TERM 2633 2860176 - 2860192 + g 75 -13.7 -3.05384 | CTCCCATGCCGGTAA GGTCGCG TCG CGCGACC TTCAATCCGGCGAGC Nham_2602 2861795 - 2861103 - | hypothetical protein TERM 2634 2861774 - 2861788 + g 72 -4.2 -4.55128 | GCTCCCTATTGATCT CTGCAA GCG TGGCAG TTTTCATTTCGCGGT Nham_2603 2862135 - 2861803 - | hypothetical protein TERM 2635 2862008 - 2861980 - GR 81 -11 -3.89822 | gap 1 GACCGAGCCGAGAAA CGTGCCCTCGTCG TTGA CGACGAGG-CTCG ATCCTGCCGGGCGCG Nham_2604 2863342 - 2862110 - | VWA containing CoxE-like TERM 2636 2862607 - 2862579 - GR 71 -10.2 -3.56643 | overlap 2862596 2862598 GTGACATTGGTCAAA CGCGTCCCGAAC AGAAA GACCGAGACGCG CTTGCGCGCATCGGT TERM 2637 2862623 - 2862596 - GR 74 -7.6 -4.1891 | overlap 2862579 2862598 CGTCCCGAACAGAAA GACCGAGACGCG CTTG CGCGCATCGGTG ATGGCATGGAGGAAA TERM 2638 2862621 - 2862598 - GR 75 -10.2 -3.6944 | overlap 2862579 2862596 TCCCGAACAGAAAGA CCGAGACGCG CTTG CGCGCATCGG TGATGGCATGGAGGA Nham_2605 2864266 - 2863355 - | ATPase Nham_2606 2865109 - 2864303 - | carbon-monoxide dehydrogenase Nham_2607 2865653 - 2865168 - | (2Fe-2S)-binding Nham_2608 2866247 - 2865801 - | carbon monoxide dehydrogenase subunit G TERM 2639 2866422 - 2866465 + H 100 -20.6 -4.27316 | gap 1, opp_overlap 2866423 2866424, overlap 2866423 2866424 GCGCTGAATAAATAA AC-TAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTATGA TTTTGAATTGACGCG TERM 2640 2866463 - 2866423 - H 100 -24.3 -4.67607 | opp_overlap 2866422 2866423 2866424, overlap 2866424 CGCTGAATAAATAAA CTAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTAT GATTTTGAATTGACG TERM 2641 2866423 - 2866464 + H 100 -24.1 -3.16068 | gap 1, opp_overlap 2866423 2866424, overlap 2866422 2866424 CGCTGAATAAATAAA C-TAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTATG ATTTTGAATTGACGC TERM 2642 2866462 - 2866424 - H 100 -27.8 -3.39841 | opp_overlap 2866423 2866422 2866424, overlap 2866423 GCTGAATAAATAAAC TAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTA TGATTTTGAATTGAC TERM 2643 2866424 - 2866462 + H 100 -27.8 -3.13906 | opp_overlap 2866424 2866423, overlap 2866423 2866422 GCTGAATAAATAAAC TAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAGGCTCTA TGATTTTGAATTGAC TERM 2644 2867110 - 2867131 + G 73 -8.7 -4.07568 | opp_overlap 2867079 TCACCGACACCGTGA TCGGCGG CTGGCTGA CCGCCGA TTTTCGCGAACGCCA Nham_2609 2866629 - 2867444 + | 3-oxoadipate enol-lactonase Nham_2610 2868026 - 2867496 - | hypothetical protein TERM 2645 2868208 - 2868191 - H 72 -9.1 -3.81755 | opp_overlap 2868174 2868191 AGCGGGCAAACACAA TCCCGCC GTTT GGCGGAA TTTCTGGAAAGCTCG Nham_2611 2868492 - 2869406 + | inner-membrane translocator Nham_2612 2869418 - 2870803 + | inner-membrane translocator Nham_2613 2870800 - 2871636 + | ABC transporter related Nham_2614 2871633 - 2872376 + | ABC transporter related Nham_2615 2872649 - 2873770 + | extracellular ligand-binding receptor TERM 2646 2873883 - 2873873 - T 74 -8.2 -4.18197 | opp_overlap 2873873 ACCGTCGATGGAAAA CGGC ACA GCCG TCGTTGACCTCAGGG Nham_2616 2874684 - 2873950 - | cytochrome c biogenesis protein, transmembrane region Nham_2617 2874835 - 2875833 + | peptidase S58, DmpA Nham_2618 2876051 - 2876305 + | hypothetical protein Nham_2619 2877506 - 2876352 - | hypothetical protein TERM 2647 2876731 - 2876719 - G 81 -10.5 -4.15006 | AGATCGACTCGAAAA GGCGC TGC GCGCC AGGTCAAACTTGCAT Nham_2620 2877892 - 2878593 + | ribulose-phosphate 3-epimerase TERM 2648 2880250 - 2880264 + G 88 -8.6 -4.81083 | ATCGAGTTGCAATCG GCGTTT GCG AAACGC TTTTTCCTGGTTGCG Nham_2621 2878954 - 2881041 + | TonB-dependent receptor, plug TERM 2649 2881132 - 2881109 - T 88 -16 -3.06183 | gap 1 GTCATTGCGAGCCAA CGGGCCGGCGC AAG GCGCCG-CCCG ATGATAAACTCCGCG Nham_2622 2881849 - 2881244 - | peptidoglycan binding domain-containing protein Nham_2623 2883686 - 2881842 - | multi-sensor signal transduction histidine kinase TERM 2650 2883218 - 2883195 - G 80 -14.6 -3.1886 | gap 1 ACCGAAGGCCATGAA GACGCCGTGCG CCG CGC-CGGCGTC GAGCGGCGGCAAAAC TERM 2651 2883633 - 2883603 - G 73 -13.3 -3.14211 | gap 1, opp_overlap 2883605, overlap 2883589 2883587 ACGCGGTCCCATGAA CG-CGCGATGACGC GCCC GCGTCAACGCGTCG TATCGCGCCGACGGA TERM 2652 2883605 - 2883630 + g 74 -14.7 -2.62184 | opp_overlap 2883589 2883587 2883603 GCGGTCCCATGAACG CGCGATGACGC GCCC GCGTCAACGCG TCGTATCGCGCCGAC TERM 2653 2884104 - 2884087 - H 78 -3.3 -5.03145 | overlap 2884089 CAACGGGTGAAAAAA GACGCAT AGGG ACGCGAC ATGTTTTTCCTGCTT Nham_2624 2884105 - 2884512 + | hypothetical protein Nham_2625 2884793 - 2885221 + | Fe-S metabolism associated SufE TERM 2654 2885646 - 2885625 - T 82 -13.7 -3.21354 | GCAGACATCCATCAA CAGGCCGGA AAAC TCCGGCCCG CACGCCTGCAGCGCC TERM 2655 2885980 - 2886020 + T 74 -11.2 -3.53012 | gap 1, opp_overlap 2885980 2885976 TGCGCGCGAAACCGA TCGACGACTTCGGCCGG CCGGCTCT TCGGCCGACG-CGTCGA TTTGCCGACGCCGCG TERM 2656 2886468 - 2886486 + T 78 -6 -4.57073 | overlap 2886470 TATCCTAGAGGCTCT TTCTATCC CGG GGATAGCA TTTTTCCAAAAAATA TERM 2657 2886603 - 2886575 - T 88 -13.3 -3.69359 | overlap 2886576 ATCAAAATCATAGAA CCTCGCTTCTGAT TCC ATCAGAAGCGAAA AGGCTCTAAGGCATC TERM 2658 2886602 - 2886576 - T 80 -14.6 -2.80531 | overlap 2886575 TCAAAATCATAGAAC CTCGCTTCTGAT TCC ATCAGAAGCGAA AAGGCTCTAAGGCAT TERM 2659 2886661 - 2886679 + T 74 -8.1 -4.17048 | opp_overlap 2886658 ATTCCTAATAATGGG CGCCAGG AAGCC CTTGGCG TTATTTTCGCCGCCG Nham_2627 2887093 - 2886680 - | MucR family transcriptional regulator Nham_2628 2888130 - 2887213 - | hypothetical protein TERM 2660 2887486 - 2887436 - G 73 -13.2 -3.16564 | gap 3 GTCCCACCTGACGAA GCCGCGGAC-G-GCGCGCG-GCCCG ACTC CGGGCGCGATCGCTCAGACCGCGGC CAAGCATTGTCGAAC TERM 2661 2888415 - 2888390 - R 71 -12.5 -2.56095 | opp_overlap 2888392, overlap 2888386 TGCACAGCGAATCCA GACGCCGCCCA ATTC CGGGCGGCGTT TTCATGTGAGCGGAT TERM 2662 2888392 - 2888413 + r 100 -14.4 -4.34402 | opp_overlap 2888390 2888386 CACAGCGAATCCAGA CGCCGCCC AATTCC GGGCGGCG TTTTCATGTGAGCGG Nham_2629 2889847 - 2888441 - | hypothetical protein TERM 2663 2889136 - 2889146 + g 79 -8.2 -4.36914 | opp_overlap 2889124 GAATTCGGGTCAGCA CCCG GAT CGGG TTTTGTGCGCCGCCA TERM 2664 2889311 - 2889338 + g 72 -4.2 -4.56597 | gap 1, opp_overlap 2889329, overlap 2889301 2889312 CGCTGCAAGATCCTT CTT-GTTCTGTTC GAG GAACGGCACGAAG TTTTTCGAGCCGACC Nham_2630 2891246 - 2889882 - | hypothetical protein TERM 2665 2890590 - 2890572 - G 80 -14.6 -3.18429 | overlap 2890563 GAAAATGCCCAGGAA CGCGACCA TGC TGGTCGCG CTGGCCCATCGGCGG Nham_2631 2892875 - 2891307 - | protein of unknown function DUF853, NPT hydrolase putative TERM 2666 2892835 - 2892865 + g 70 -10.4 -3.56092 | TTGCCGATGAATATG CTGTGATCGGTATC GCC GATCCCGGTCGCGG TTTCCGCCATGATCG Nham_2632 2893390 - 2893848 + | hypothetical protein TERM 2667 2893863 - 2893876 + F 83 -8.1 -4.59853 | AGCCGCCCCTCCTGC GCCTC CGAA GAGGC TTTTTCGCGCCTTGA TERM 2668 2893976 - 2893957 - g 75 -12.2 -3.64912 | TATCCAGAGATATAA CGGATGAC ACGC GTCATCCG GTGCTGCATGGGCTG Nham_2633 2893896 - 2894780 + | dihydropteroate synthase TERM 2669 2895180 - 2895216 + G 70 -10 -3.54424 | gap 1, opp_overlap 2895168 2895169, overlap 2895181 CAAGCTGCTCGAACG CGCCGCGGGCGCCGTCG CCGA CG-CGGTGCTGGCGGCA TTTCCGCGCATCAGC TERM 2670 2895181 - 2895215 + G 72 -13.5 -2.72511 | gap 1, opp_overlap 2895168 2895169, overlap 2895180 AAGCTGCTCGAACGC GCCGCGGGCGCCGTCG CCGA CG-CGGTGCTGGCGGC ATTTCCGCGCATCAG Nham_2634 2894956 - 2895321 + | dihydroneopterin aldolase Nham_2635 2895331 - 2895822 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 2671 2896012 - 2895963 - f 75 -3.8 -4.7254 | gap 3, opp_overlap 2895965 2895966, overlap 2895965 2895969 2895970 ATGCTCGATCAAAAA GATTAAGGCCAGAGTCTGATTCAAC GCA GTTGAGTCGGACTCTGG-C--AACC GGGTTTCCGGAGACG TERM 2672 2896009 - 2895969 - f 88 -15.5 -3.62531 | opp_overlap 2895966 2895965, overlap 2895963 2895965 2895970 GATCAAAAAGATTAA GGCCAGAGTCTGATTCAAC GCA GTTGAGTCGGACTCTGGCA ACCGGGTTTCCGGAG TERM 2673 2896008 - 2895970 - f 100 -19 -2.76434 | opp_overlap 2895966 2895965, overlap 2895969 2895963 2895965 ATCAAAAAGATTAAG GCCAGAGTCTGATTCAAC GCA GTTGAGTCGGACTCTGGC AACCGGGTTTCCGGA TERM 2674 2896405 - 2896430 + G 77 -3.9 -4.82901 | overlap 2896406 GCCGCCGACCCCGGA GGCTATCGCGA AAAT TCTCGATGGCG TTTTTCTCGACGCAG Nham_2636 2896037 - 2897926 + | methylmalonyl-CoA mutase Nham_2637 2897923 - 2898387 + | glutathione-dependent formaldehyde-activating, GFA Nham_2638 2898388 - 2900550 + | methylmalonyl-CoA mutase TERM 2675 2900551 - 2900565 + F 70 -4.2 -4.6635 | overlap 2900550 GAGGCGGCGGGGTAG CGCG AACTCAG CGCG TTTTCTTCGCCATTT TERM 2676 2901402 - 2901377 - g 88 -3.9 -5.252 | gap 1, overlap 2901379 CAGGCCGAGAAAAAA GAGCGCGGCATC GAC GATTCCG-GCAC CATCGACTGGTACAA Nham_2639 2900822 - 2901652 + | hypothetical protein TERM 2677 2902572 - 2902551 - g 74 -13 -3.27525 | overlap 2902546 CCGCGCCAAAGTGAA GGCGACCG AGGCCG CGGTCGCC GGCGGCCGCATCACG Nham_2640 2901649 - 2902629 + | arginine/ornithine transport system ATPase Nham_2641 2903873 - 2902668 - | monooxygenase, FAD-binding TERM 2678 2903404 - 2903374 - G 74 -10.2 -3.75824 | CAGTCGACAAGATAA CGGGCGCGATGCTG CCG CGTCCCCGCGCCCG AGCTGAGCGTGAGCT TERM 2679 2903656 - 2903633 - G 76 -8.8 -4.18018 | gap 1 CGGCGGTATTGAAAA GGCCGG-GAAG TTG CTGCTCCGGCC CGTCAGGGTCTGCCA TERM 2680 2903787 - 2903757 - G 84 -13.4 -3.71848 | gap 1, overlap 2903759 TTTCTCCACCAACAA CA-CACGCTGGCC GTATCT GGCCAGCGTGATG GCGGTTGCGGCGCCC TERM 2681 2903784 - 2903759 - G 89 -16.2 -3.44284 | overlap 2903757 TCTCCACCAACAACA CACGCTGGCC GTATCT GGCCAGCGTG ATGGCGGTTGCGGCG Nham_2642 2905901 - 2903877 - | hypothetical protein Nham_2643 2906349 - 2905993 - | twin-arginine translocation pathway signal Nham_2644 2907126 - 2907788 + | peptidase C15, pyroglutamyl peptidase I TERM 2682 2908091 - 2908114 + G 83 -15.3 -3.21099 | GTGATCTCGGTGTAT CTGGCCGGC TTCGGC GCCGGCCAG TTCATCATGGGGCCG Nham_2645 2907893 - 2909155 + | Bcr/CflA subfamily drug resistance transporter Nham_2646 2909269 - 2910636 + | nitrous oxidase accessory protein Nham_2647 2911821 - 2910751 - | high-affinity nickel-transporter Nham_2648 2912105 - 2911827 - | hypothetical protein Nham_2649 2912975 - 2912316 - | hypothetical protein TERM 2683 2912598 - 2912614 + g 71 -13.7 -2.62184 | opp_overlap 2912586 2912582, overlap 2912609 2912609 CCATGACCAGTCGAT CGCCGGA TCG TCCGGCG TCGTCTCGCGCCGCG TERM 2684 2913438 - 2913406 - H 72 -5.4 -4.50058 | gap 1, overlap 2913407 TAGCGAGAACCAAAA CCGTCACGCGCC-GC ATGG GCTGGCGCACGCCGT CGCCGGTCAAGAGCT Nham_2651 2913473 - 2913742 + | hypothetical protein Nham_2652 2913799 - 2914092 + | hypothetical protein TERM 2685 2914467 - 2914522 + T 78 -8.6 -4.1822 | gap 4, overlap 2914467 2914470 2914519 CGCCACCTCATGACC G-GATCGGAGCAGCCGACCATTTTCCCG GCGT CGGGGAAATGGT-GCCTGC-C-GATCAC TTTGTTGACGTCAAC TERM 2686 2914598 - 2914580 - T 75 -10.2 -3.65224 | opp_overlap 2914594 ATTCGACGCGAACAA GACAGCGC AAA GCGCCGCC AGAAGGACGGTTGGT Nham_2653 2914942 - 2914637 - | hypothetical protein Nham_2654 2915367 - 2915618 + | transglycosylase-associated protein TERM 2687 2915839 - 2915820 - T 76 -7 -4.46267 | opp_overlap 2915820, overlap 2915823 ATAACCCAAGCAAAA GAAGGCCG AATA CGGCCCGC TGCTTCTCGGTCAGT TERM 2688 2915836 - 2915823 - T 83 -9.5 -4.33004 | opp_overlap 2915820, overlap 2915820 ACCCAAGCAAAAGAA GGCCG AATA CGGCC CGCTGCTTCTCGGTC Nham_2655 2917152 - 2916337 - | hypothetical protein TERM 2689 2918297 - 2918268 - R 100 -17.9 -4.48333 | ATAGATTAATGAAAA GACCCGCCCGG GGGGACAA CCGGGCGGGTC AAGCCATATGGGCGC TERM 2690 2918436 - 2918479 + r 100 -22 -4.4078 | gap 1, opp_overlap 2918437 2918438 2918440, overlap 2918437 2918438 AACGATCTGACAAGA AC-TAGAGCCCCGCTTCTGAT GAA ATCAGAAGCGGGGCTCTATGA TTTTGATTCGACGCG TERM 2691 2918477 - 2918437 - R 100 -25.7 -3.81 | opp_overlap 2918437 2918436 2918438, overlap 2918438 2918440 ACGATCTGACAAGAA CTAGAGCCCCGCTTCTGAT GAA ATCAGAAGCGGGGCTCTAT GATTTTGATTCGACG TERM 2692 2918437 - 2918478 + r 100 -25.5 -3.24146 | gap 1, opp_overlap 2918437 2918438 2918440, overlap 2918436 2918438 ACGATCTGACAAGAA C-TAGAGCCCCGCTTCTGAT GAA ATCAGAAGCGGGGCTCTATG ATTTTGATTCGACGC TERM 2693 2918438 - 2918476 + r 100 -29.2 -3.18268 | opp_overlap 2918437 2918438 2918440, overlap 2918437 2918436 CGATCTGACAAGAAC TAGAGCCCCGCTTCTGAT GAA ATCAGAAGCGGGGCTCTA TGATTTTGATTCGAC TERM 2694 2918476 - 2918438 - R 100 -29.2 -2.88118 | opp_overlap 2918438 2918437 2918436, overlap 2918437 2918440 CGATCTGACAAGAAC TAGAGCCCCGCTTCTGAT GAA ATCAGAAGCGGGGCTCTA TGATTTTGATTCGAC TERM 2695 2918474 - 2918440 - R 100 -27.4 -2.98813 | opp_overlap 2918438 2918437 2918436, overlap 2918438 2918437 ATCTGACAAGAACTA GAGCCCCGCTTCTGAT GAA ATCAGAAGCGGGGCTC TATGATTTTGATTCG Nham_2657 2920449 - 2918566 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 2696 2919625 - 2919611 - G 74 -5.6 -4.43879 | overlap 2919612 AGGACGTAACGAAAA TTCGGC TGC GCCGAC CGCACGGCGGCATCG TERM 2697 2920164 - 2920145 - G 71 -10.7 -3.48276 | GGGGCTTCGATATAA GGAGCCC TATAGG GGGCTCC GATCACGCCGAGCGG Nham_2658 2921188 - 2920484 - | hypothetical protein TERM 2698 2921156 - 2921167 + g 74 -5.8 -4.48713 | overlap 2921147 GACATCTCCGGGCCC GTCG TCCG CGAC TTTCTTGTTCGTCGC Nham_2659 2921754 - 2921185 - | RNA polymerase sigma factor TERM 2699 2921950 - 2921910 - H 70 -4 -4.58395 | gap 2, overlap 2921922 GGGACGCCCTAAAAA GGTAGCACGATACGGGACCG GCC CGGTCGC-TAACCTGC-ACC CTATCCGGGAAAGCG Nham_2660 2922216 - 2923334 + | hypothetical protein TERM 2700 2923704 - 2923692 - g 78 -10.5 -4.09685 | TCGCACGCGCGAAAA CCGGC CAA GCCGG AAGCGAAAGCCGACA Nham_2661 2923494 - 2924210 + | hypothetical protein TERM 2701 2924365 - 2924408 + F 100 -18.4 -4.54727 | gap 1, overlap 2924366 2924367 2924369 CGCGACCGGCAGCAG CTG-AGAGCCCCGCTTCTGAT GGA ATCAGAAGCGGGGCTCTATAA TTTTGATTTGACGCG TERM 2702 2924366 - 2924407 + F 100 -21.9 -3.32354 | gap 1, overlap 2924365 2924367 2924369 GCGACCGGCAGCAGC TG-AGAGCCCCGCTTCTGAT GGA ATCAGAAGCGGGGCTCTATA ATTTTGATTTGACGC TERM 2703 2924367 - 2924405 + F 100 -24.8 -3.22314 | overlap 2924366 2924365 2924369 CGACCGGCAGCAGCT GAGAGCCCCGCTTCTGAT GGA ATCAGAAGCGGGGCTCTA TAATTTTGATTTGAC TERM 2704 2924369 - 2924403 + F 100 -27.4 -3.16315 | overlap 2924367 2924366 2924365 ACCGGCAGCAGCTGA GAGCCCCGCTTCTGAT GGA ATCAGAAGCGGGGCTC TATAATTTTGATTTG Nham_2662 2924481 - 2925260 + | enoyl-CoA hydratase/isomerase TERM 2705 2925279 - 2925269 - T 70 -2.4 -4.75174 | CAGGTAACTGAAAAA CGCG CGT CGGG GAAAGCGTACCGCCT Nham_2663 2927290 - 2925428 - | hypothetical protein TERM 2706 2926425 - 2926445 + g 72 -13.9 -2.71712 | overlap 2926424 2926440 TCCGCCATTGCGCTG CCCGGCGCG AGC CGCGCCGCG ATTTCGCGAAACCGC TERM 2707 2926754 - 2926733 - G 72 -13.7 -2.72661 | gap 1 CACCAGTCTGAACGA CGCCC-CGCC CGC GGCGCGGGCG CGCAGAAGCTCGAGC Nham_2664 2928732 - 2927485 - | threonine dehydratase TERM 2708 2927517 - 2927532 + g 74 -6 -4.4078 | opp_overlap 2927502, overlap 2927492 2927491 CCAGCCGGTCGCGGC GGCGCG CTCT CACGCC TTTTGCTTCCAGGCC TERM 2709 2929014 - 2928976 - H 72 -9.5 -3.73775 | gap 1, opp_overlap 2928999 GCCAGCGTCAGGAAA GCCATCATGCCGCACGGG CCGG CCGGTGCGGCGCG-TGAC AAGCGGCGTCCGTCT Nham_2665 2929066 - 2929353 + | hypothetical protein TERM 2710 2929430 - 2929388 - T 79 -13.8 -3.06183 | gap 2, opp_overlap 2929388 2929393, overlap 2929393 GTCATTGCGAGCGAA GCGAAGCAATCCAG--TCTT TCTGT AAGATTCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 2711 2929388 - 2929430 + T 83 -14.3 -3.06183 | opp_overlap 2929388 2929393, overlap 2929393 GTCATTGCGAGCGAA GCGAAGCAATCCAGTCTTT CTGTA AGATTCTGGATTGCTTCGC TTCGCTCGCAATGAC dnaE2 2932959 - 2929465 - | error-prone DNA polymerase Nham_2667 2934344 - 2932956 - | hypothetical protein TERM 2712 2934366 - 2934402 + r 72 -5.3 -4.54026 | gap 2 CGCGAGGCCGAGGCG CGCGGCTGCGTCATC CAGCGCGGC GATGAC-CAGC-GCG TTATTTTGTTTGGCG Nham_2668 2935275 - 2934439 - | hypothetical protein Nham_2669 2935357 - 2935611 + | hypothetical protein Nham_2670 2936132 - 2935629 - | hypothetical protein Nham_2671 2937403 - 2936219 - | peptidase M20D, amidohydrolase TERM 2713 2937327 - 2937296 - G 74 -9.4 -3.86897 | overlap 2937285 2937297 2937325 GCGATCCGCGACAAA CGCCGCGGTACGAT GCAC ATCGTACAGCAGCT CCGGGTGCTGATGGA TERM 2714 2937326 - 2937297 - G 70 -12.9 -2.91924 | overlap 2937285 2937296 2937325 CGATCCGCGACAAAC GCCGCGGTACGAT GCAC ATCGTACAGCAGC TCCGGGTGCTGATGG TERM 2715 2938085 - 2938055 - g 71 -9.6 -3.79043 | opp_overlap 2938073 GACGAGGAAGTCAAA TTGTACCGCGAGCG CTA CGGCCGCGGCACCA AGGGCGCGGGCTGGT Nham_2672 2937638 - 2938579 + | metallophosphoesterase Nham_2673 2938592 - 2938921 + | blue (type1) copper domain-containing protein Nham_2674 2938914 - 2939564 + | RNA polymerase sigma factor Nham_2675 2939561 - 2940322 + | putative transmembrane transcriptional regulator (anti-sigma factor) Nham_2676 2941959 - 2940568 - | aminotransferase class-III TERM 2716 2941228 - 2941214 - G 95 -12.8 -4.38712 | TCGACGGCGAGAAAA CGGCCG GTA CGGCCG ATGCCGGTCTGAACT Nham_2677 2942069 - 2942764 + | hypothetical protein Nham_2678 2945335 - 2942717 - | hypothetical protein ispH 2945883 - 2946827 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 2717 2947795 - 2947774 - g 74 -5.8 -4.49756 | overlap 2947775 CGGCAAATACGAAAA GTGCGCCA ACTGCA TGGCGCAT TGCGGTTACGAGCCG Nham_2680 2946875 - 2948044 + | radical SAM family protein TERM 2718 2948041 - 2948026 - T 70 -4.6 -4.55826 | overlap 2948009 GGCAAAAGAGCAAAA GGCTTC CACC GCAGCC TGACGCCAGCACACT TERM 2719 2948266 - 2948226 - T 100 -22.7 -5.94713 | opp_overlap 2948226 2948255 ACGCTATAAAAAAAA CACCGTCGGCGCTGGAG TTCAATT CTTCAGCGCCGACGGTG TTTTTATTGTCGGCG TERM 2720 2948226 - 2948266 + T 100 -24.9 -5.18726 | opp_overlap 2948226, overlap 2948255 ACGCTATAAAAAAAA CACCGTCGGCGCTGGAG TTCAATT CTTCAGCGCCGACGGTG TTTTTATTGTCGGCG TERM 2721 2948255 - 2948282 + T 77 -12 -3.53012 | opp_overlap 2948226, overlap 2948226 GAGTTCAATTCTTCA GCGCCGACGGTG TTTT TATTGTCGGCGC TTTGAAACCCCGCGG Nham_2681 2949028 - 2948318 - | hypothetical protein Nham_2682 2951013 - 2949049 - | squalene cyclase Nham_2683 2952281 - 2951034 - | amine oxidase Nham_2684 2953117 - 2952281 - | squalene/phytoene synthase TERM 2722 2952693 - 2952663 - G 86 -18.4 -2.64616 | GCGCGACCGAGATGA TGCGCGAGCAGGAT GCC ATCCTGCTCGGGCA ATCCGAACACCCGGA Nham_2685 2953992 - 2953114 - | squalene/phytoene synthase TERM 2723 2953708 - 2953744 + g 70 -10.1 -3.57561 | gap 1, overlap 2953709 CTTCAGCACGTCGAT GGCG-TGGCGCGGCGG CATCGA CCGTTGCGCCAGCGCA TTTCGAAGATTGACC TERM 2724 2953709 - 2953743 + g 72 -13.6 -2.74322 | gap 1, overlap 2953708 TTCAGCACGTCGATG GCG-TGGCGCGGCGG CATCGA CCGTTGCGCCAGCGC ATTTCGAAGATTGAC TERM 2725 2954135 - 2954183 + r 75 -10.1 -3.63694 | opp_overlap 2954157, overlap 2954138 TTTAGCCGTGCCGAT CTGCCGCGGCGACGAGCGAACAG GAC CGGTTCGTCCGTCCTCGCGGTGC TTATTGGCCGTGGCT TERM 2726 2954138 - 2954180 + r 87 -16.2 -2.93549 | opp_overlap 2954157, overlap 2954135 AGCCGTGCCGATCTG CCGCGGCGACGAGCGAACAG GAC CGGTTCGTCCGTCCTCGCGG TGCTTATTGGCCGTG Nham_2686 2954429 - 2954184 - | hypothetical protein Nham_2687 2955012 - 2955512 + | hypothetical protein Nham_2688 2958187 - 2955824 - | RND superfamily transporter TERM 2727 2957299 - 2957283 - G 72 -3.7 -4.67234 | overlap 2957284 ATCGAATCGGAAAAA CTGATGA CCA TGATCAG CGGGGTCATCACGTT Nham_2689 2960005 - 2958422 - | radical SAM family protein TERM 2728 2960156 - 2960169 + r 72 -9.5 -3.66803 | opp_overlap 2960149 2960165 2960166, overlap 2960166 GCCGCAAAGACATCT GCGCG AAAA CGCGC TTTGCGCTGTTGCCC Nham_2690 2961562 - 2960213 - | amidase TERM 2729 2960583 - 2960603 + g 77 -2.4 -5.0538 | overlap 2960584 ATGCGGCTGATGACG CGCGGATC GTAGA GCTCCGCC TTTTTTGCAATCAGC TERM 2730 2961245 - 2961215 - G 91 -18.3 -3.23216 | gap 1, opp_overlap 2961211 2961208 CCCGATCACCACGAA GCCGG-CGCGGCGC AGAC GCGCCACGACCGGC GCGTCGTTCGCTGCC TERM 2731 2961450 - 2961468 + g 83 -12.4 -4.07687 | opp_overlap 2961439, overlap 2961440 AACACCCGCGCGCCC TCGCCGGC TTT GTCGGCGA TTTTCGCAAGGCAGT Nham_2691 2964376 - 2961587 - | phosphoenolpyruvate carboxylase Nham_2692 2964633 - 2964842 + | putative ferredoxin TERM 2732 2965663 - 2965721 + G 85 -14.5 -3.61398 | CGCGATCGGCTCCTC GCTCTGGCATCTCG-CGCAGACGCCGGCG GAC CGCGCGCGTCT-CGTCGCGGAGCCGGAGC TTCTTCCGACGGCGA Nham_2693 2964917 - 2966113 + | cytochrome P450 Nham_2694 2966175 - 2967395 + | OsmC-like protein TERM 2733 2967666 - 2967656 - g 79 -8.2 -4.36914 | overlap 2967658 GCTGCGGTCAGAAAA CGGC CGG GCCG GGTTCAAAGACGTAA Nham_2695 2967623 - 2968237 + | TetR family transcriptional regulator Nham_2696 2969326 - 2968244 - | protein of unknown function DUF395, YeeE/YedE TERM 2734 2968401 - 2968375 - G 75 -12.2 -3.55444 | GCGCCAGTGTCGAAA GGCCGGTCAGGC CCT GCCCGACCGAAC ATCCATAGGCCATCG TERM 2735 2969523 - 2969581 + r 81 -2.9 -5.32599 | gap 2, opp_overlap 2969514 2969513, overlap 2969523 2969525 ATCAAGCGGCAGGCA G-AGGCCCGGCGGGCGAAGCCG-GCGCTC GAC GGATGCATGGCGTCGCCGGACGCGTCTAC TTTTTGTCTTTTGTC Nham_2697 2969832 - 2969578 - | hypothetical protein Nham_2698 2971239 - 2969938 - | D-amino-acid dehydrogenase TERM 2736 2971233 - 2971213 - G 100 -11.1 -4.74103 | opp_overlap 2971214, overlap 2971214 CTCCGAACCCAAAAA TCGTTCGGC CTC GCCGAACGT TATCATTCCAACTTA TERM 2737 2971232 - 2971214 - G 83 -14.6 -3.4398 | opp_overlap 2971214, overlap 2971213 TCCGAACCCAAAAAT CGTTCGGC CTC GCCGAACG TTATCATTCCAACTT TERM 2738 2971214 - 2971232 + g 83 -14.6 -3.51597 | opp_overlap 2971214 2971213 TCCGAACCCAAAAAT CGTTCGGC CTC GCCGAACG TTATCATTCCAACTT Nham_2699 2974513 - 2971424 - | acriflavin resistance protein TERM 2739 2971644 - 2971595 - G 72 -11.9 -3.37354 | gap 1, overlap 2971584 2971576 GAGACCGATCGAGAA CCGGCTCGCCGCCCCCGC-GCCCG ATG CCGTCAGCAGCGGCAGCAGGCCGG TGACCATCGCCGCGG Nham_2700 2975826 - 2974615 - | secretion protein HlyD TERM 2740 2974723 - 2974734 + g 70 -7.2 -3.97368 | overlap 2974698 AGCGACCTTGTCGCC GGGC TTCA GCCC TTTCTCGATTACCGC Nham_2701 2976547 - 2975828 - | TetR family transcriptional regulator TERM 2741 2976413 - 2976395 - G 81 -11.7 -3.9461 | GTGTTTGAACAATAA CGCCTCG GAGAT CGAGGCG GCGGCGGCAACGCTC TERM 2742 2976585 - 2976571 - R 70 -4.2 -4.63218 | CCGCTGTCAAGAAAA TGCTGC ATC GCATCA ATCCTCATTCGACTA Nham_2702 2977939 - 2976680 - | Glu/Leu/Phe/Val dehydrogenase Nham_2703 2979468 - 2978248 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2743 2978425 - 2978401 - G 70 -9.9 -3.65812 | opp_overlap 2978401 GGCCTTGTAACAGAA CGCCGAGAACG ATC CCTCCCCGGCG TTTCCCCGCACCACG TERM 2744 2978915 - 2978899 - G 81 -4.3 -5.00616 | overlap 2978901 GCGGCGCTGAAAAAA CTCCGAA ATC TCCGGTG TGACCGCGCGCGCCA Nham_2704 2979681 - 2980955 + | beta-lactamase Nham_2705 2981920 - 2981030 - | citrate lyase Nham_2706 2982369 - 2981917 - | MaoC-like dehydratase Nham_2707 2982623 - 2982949 + | hypothetical protein TERM 2745 2983232 - 2983189 - T 89 -17 -3.14931 | gap 1, opp_overlap 2983190 2983191 2983192 CTGACCCGCGACCAA CGCTAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAAGCTCTAT-G ATTTTGATTTGACGG TERM 2746 2983190 - 2983233 + T 100 -14.8 -4.54727 | gap 1, opp_overlap 2983189, overlap 2983191 2983192 TGACCCGCGACCAAC GC-TAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAAGCTCTATGA TTTTGATTTGACGGG TERM 2747 2983191 - 2983232 + T 100 -18.3 -3.32354 | gap 1, opp_overlap 2983189, overlap 2983190 2983192 GACCCGCGACCAACG C-TAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAAGCTCTATG ATTTTGATTTGACGG TERM 2748 2983192 - 2983230 + T 100 -22 -3.22314 | opp_overlap 2983189, overlap 2983191 2983190 ACCCGCGACCAACGC TAGAGCCTCGCTTCTGAT GGA ATCAGAAGCGAAGCTCTA TGATTTTGATTTGAC Nham_2708 2985114 - 2983327 - | hypothetical protein TERM 2749 2984578 - 2984598 + g 71 -8.9 -3.95073 | GTACCATGCGTCAAC GTCGCTCCG TAG CGCGGCGAC TTTATCGCTGTCAGG Nham_2709 2986292 - 2985696 - | hypothetical protein Nham_2710 2986906 - 2986289 - | electron transport protein SCO1/SenC Nham_2711 2988357 - 2986903 - | cytochrome c oxidase, subunit I Nham_2712 2988939 - 2988397 - | cytochrome c oxidase, subunit II TERM 2750 2989077 - 2989063 - R 78 -4.2 -4.90525 | opp_overlap 2989063 CAACGTCAAATAAAA CACGTA CTA TTCGTG TATCTTATGCCGCAA Nham_2713 2989607 - 2989245 - | hypothetical protein TERM 2751 2990146 - 2990163 + r 86 -14.1 -3.25719 | opp_overlap 2990146 GCAAAACGTGAAAAA GCCGCCG AATC CGGCGGC TTCCTCATATCGTGG TERM 2752 2990163 - 2990146 - R 100 -14.1 -4.7416 | opp_overlap 2990146 GCAAAACGTGAAAAA GCCGCCG AATC CGGCGGC TTCCTCATATCGTGG Nham_2714 2990788 - 2990198 - | hypothetical protein TERM 2753 2990978 - 2990953 - R 87 -14.7 -3.39286 | opp_overlap 2990952 2990947 2990953, overlap 2990957 ACAGTATCGCAAATA CAAACGGCGCC GCGA GGCGCCGTCCG ATTCGTTTCGTCATT TERM 2754 2990974 - 2990957 - R 100 -14.1 -4.33928 | opp_overlap 2990953 2990952 2990947, overlap 2990953 TATCGCAAATACAAA CGGCGCC GCGA GGCGCCG TCCGATTCGTTTCGT Nham_2715 2992568 - 2991006 - | 2-isopropylmalate synthase TERM 2755 2992335 - 2992347 + g 80 -6.2 -4.7153 | overlap 2992303 2992327 GGCGCGGGCCAGACC CGCG ATCAC CGCG TTTTTGGCGTTCTTT Nham_2716 2993986 - 2992970 - | hypothetical protein Nham_2717 2994742 - 2994041 - | hypothetical protein TERM 2756 2994916 - 2994881 - H 70 -3.9 -4.63218 | gap 1, opp_overlap 2994905, overlap 2994885 CTTCGTCCAAGAAAA CGATGCATCGGCC-TC AAACA GACAGCCGACGCCGCG TTTTAATCCCGTCAG Nham_2718 2995047 - 2995838 + | ABC transporter related TERM 2757 2996114 - 2996125 + G 76 -5.8 -4.57073 | TTCGGCGTCGGTTTC TCCG CATT CGGA TTTTTGCCGGCGGTG Nham_2719 2995835 - 2997394 + | substrate-binding region of ABC-type glycine betaine transport system TERM 2758 2997415 - 2997468 + T 83 -5.2 -4.90906 | gap 1, opp_overlap 2997391, overlap 2997399 2997420 GCGGTCGCGCTCGCG CGGAGCCGCCTTACTTCCCTCTCCC ACAAG GGGAGAGGGAAAAAGAGAGG-TCAG TTTTTCGTCTTGTCG Nham_2720 2998677 - 2997658 - | ketol-acid reductoisomerase ilvH 2999383 - 2998841 - | acetolactate synthase 3 regulatory subunit Nham_2722 3001310 - 2999532 - | acetolactate synthase 3 catalytic subunit TERM 2759 3001387 - 3001371 - R 100 -6.5 -5.72622 | CGCAGAAATAAAAAA GGGCC TCTGAAG GGCCC CGGCACACCGCCTTG Nham_2723 3002564 - 3001611 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 2760 3002758 - 3002737 - g 75 -13.7 -3.09516 | gap 1 CCGGCCATCATGCAA CGCCTGCGCG AAG CGCGC-GGCG ATCTGCCGATCGACG TERM 2761 3002945 - 3002964 + G 73 -11.4 -3.61894 | opp_overlap 3002942 3002943 TGCAATTTGAAACCG CGCTACGC GAGC GCGTGGCG TTGTTGAAGGGACTT Nham_2724 3002731 - 3003456 + | phosphoserine phosphatase SerB TERM 2762 3003485 - 3003520 + T 74 -8.3 -4.15565 | gap 1, opp_overlap 3003473, overlap 3003487 3003517 AAACATCGCAAATCC GCCGT-CATCACCGGG CTTGT CCCGGTGATCCACGTC TTTTGCGATGGTGGC TERM 2763 3003487 - 3003518 + T 72 -9.5 -3.67634 | gap 1, opp_overlap 3003473, overlap 3003485 3003517 ACATCGCAAATCCGC CGT-CATCACCGGG CTTGT CCCGGTGATCCACG TCTTTTGCGATGGTG TERM 2764 3003576 - 3003544 - T 71 -10.6 -3.51934 | opp_overlap 3003517, overlap 3003542 3003545 TGGTGGCGACAAAGA CGTTGATGGCCGGG TCAAG CCCAGCCATCAAAA CGCTCGACGATGTAG TERM 2765 3003575 - 3003545 - T 70 -11.9 -2.70946 | overlap 3003544 3003542 GGTGGCGACAAAGAC GTTGATGGCCGGG TCAAG CCCAGCCATCAAA ACGCTCGACGATGTA Nham_2725 3005093 - 3003600 - | peptidase S1C, Do TERM 2766 3004169 - 3004187 + g 81 -11.6 -3.92592 | overlap 3004178 CCTCGACGCCGGCGA CCAGCGCG CCG CGCGCCGG TTTGATATTGAGACT TERM 2767 3004810 - 3004821 + g 83 -7.2 -4.57569 | overlap 3004809 3004808 AGACCGCCATCCTTG CCGC CGCG GCGG TTTTTGAAGAAGTCG TERM 2768 3005364 - 3005340 - R 83 -14.4 -3.10531 | overlap 3005338 3005336 TCAAAATCACAGAGA CCGCTTCTGA TTCCG TCAGAAGCGG AATGGCTCTAGTGCC Nham_2726 3005572 - 3005372 - | hypothetical protein Nham_2727 3006508 - 3005609 - | HflC protein TERM 2769 3005786 - 3005759 - G 86 -12.7 -4.03167 | GTAGAACGCAAAGAA TGCCGGGGCCT GATTGT AGGCCGCGGCA AACAGCCGGTTGCGC Nham_2728 3007662 - 3006505 - | HflK protein TERM 2770 3007617 - 3007648 + g 83 -8 -4.57073 | gap 1, overlap 3007623 ATCCCCATGGTCCTT TCGGACCGGAG-CCC CAC GGGCCTCCGCTTTGA TTTTTCCACGGCATC Nham_2729 3008358 - 3007822 - | dihydrofolate reductase TERM 2771 3007960 - 3007941 - G 76 -5.6 -4.57569 | CGATCGCCGGAAAAA CGGCATCG CCAT CGACCCCG GCGTGAACTTCCGTC thyA 3009149 - 3008355 - | thymidylate synthase Nham_2731 3009840 - 3010448 + | hypothetical protein TERM 2772 3011437 - 3011449 + G 82 -3.4 -5.15969 | GCCTGTTCAAGATCG CGAA CGATA TTCG TTTTTTGGGTTCCGG fumC 3010539 - 3011954 + | fumarate hydratase Nham_2733 3012161 - 3012364 + | hypothetical protein TERM 2773 3012534 - 3012544 + G 79 -8.2 -4.30844 | opp_overlap 3012510 GGGCAACCTGTCCTC GGCG ATC CGCC TTTTCGTCCTGGACT Nham_2734 3012361 - 3012615 + | hypothetical protein TERM 2774 3012969 - 3012956 - g 74 -9.5 -3.8901 | TGCGAAACGACCAAA GCGGC GATC GCCGC GGCGAGCGCGAATAT Nham_2735 3012940 - 3013260 + | arylsulfate sulfotransferase-related protein Nham_2736 3017193 - 3013366 - | hypothetical protein TERM 2775 3013398 - 3013432 + g 73 -11.3 -3.59979 | CGGTCGACGCCGGCG GCCTCTGCACCAGCG GCTGG CGCGGGTGGAGCGGC TTTGGAATCGGCGCA TERM 2776 3013671 - 3013695 + g 82 -11.4 -4.07568 | opp_overlap 3013663 GAAGCGATGCCATCG CCGGCGATGG GATGG CCATCCCCGG TTTTGCGGGAGACCA TERM 2777 3014500 - 3014525 + g 76 -7.5 -4.37711 | gap 1, overlap 3014501 TTGCCGGATGTCGAG GCGTGCGGTGGC ATC GCCATCGC-CGA TTTTCCCTTTCATCG Nham_2737 3017461 - 3017976 + | hypothetical protein Nham_2738 3018156 - 3017983 - | hypothetical protein TERM 2778 3018311 - 3018286 - H 70 -3.9 -4.63218 | gap 1, opp_overlap 3018292, overlap 3018262 3018287 3018288 TTTTTCGGAACAAAA TCGCGATCGCCG ACC CGG-GATCGCTT GCACGCCGGGCTTTA TERM 2779 3018990 - 3018971 - g 74 -4.8 -4.57569 | overlap 3018972 CGACGGCTGGAAAAA TCGCGGGC TGAC GCCGGCGC AGGTGCCGTCCGGCG TERM 2780 3020003 - 3020024 + G 83 -15.1 -3.16055 | overlap 3019992 CGAGCTGAGGCCGAA GGCGCGCGG ATCG CTGCGCGCC TTGCTCGACAGTTTC TERM 2781 3020446 - 3020406 - g 88 -14.6 -3.71848 | GGCCTCGAGGAAGAA CGCCGGCTTGCCCATGTC GGCCT GACACGGGCGCGCCGTCG CGCGAAGCTTTACTT Nham_2739 3018432 - 3020933 + | UvrD/REP helicase Nham_2740 3021052 - 3021972 + | ABC transporter related TERM 2782 3022509 - 3022525 + G 73 -2.9 -4.67982 | overlap 3022510 TAATTACGCCGCTGA CCTTCCT TGG GGGAAGC TTTTATTCGATCAGC TERM 2783 3022594 - 3022614 + G 86 -8.9 -4.58395 | overlap 3022580 3022596 TCCGGTGGTGTATCT CATCAGCGG TTT CCGCTGGAG TTTTTACGAAATCGC Nham_2741 3021974 - 3022735 + | hypothetical protein TERM 2784 3022906 - 3022879 - T 100 -10.5 -5.65513 | overlap 3022880 CACGAACTAAAAAAA TTGCGGCCCGG TTCGAT CCGGACCGCAC AGTCGTGGAGGAAAT TERM 2785 3022905 - 3022880 - T 95 -14 -3.97681 | overlap 3022879 ACGAACTAAAAAAAT TGCGGCCCGG TTCGAT CCGGACCGCA CAGTCGTGGAGGAAA Nham_2742 3023266 - 3022925 - | hypothetical protein TERM 2786 3023066 - 3023044 - G 70 -11.9 -3.14564 | overlap 3023016 CGACCGCGCCACCAA CGCCGGCGC CAAGC GCGCCGCCG ATCGCGCCGCCGACC TERM 2787 3023563 - 3023575 + G 86 -6.3 -5.00616 | GTTTTTTATTCCGAT CATCA GTC TGATG TTTTTTGCCGCCGGC Nham_2743 3023540 - 3024349 + | ErfK/YbiS/YcfS/YnhG Nham_2744 3024513 - 3026120 + | FAD dependent oxidoreductase TERM 2788 3026114 - 3026163 + F 76 -3 -4.98531 | gap 3, overlap 3026118 3026126 GGCGCTGTTCGCCCG CCGTTAGA-CCCCTCTTC-GCTTCT GAT GGAATCAGAAGCGGGGCTCTA-TGG TTTTTGATTTGACGC TERM 2789 3026661 - 3026646 - f 86 -9 -4.70626 | CAACAATCTCAAAAA GTCTGC AACA GCAGAC CGGCGCCTGTTGAAG Nham_2745 3026906 - 3027178 + | hypothetical protein Nham_2746 3027219 - 3028115 + | ribosomal L11 methyltransferase Nham_2747 3028227 - 3030119 + | peptidase M24 TERM 2790 3030362 - 3030418 + G 78 -10.1 -4.08767 | gap 2, overlap 3030371 TGGTACGACCTGTCG GACGTGAAGCTGGCGG-AGG-CGCTCG ATGAC CGGGCGTCCTTCCGCCGGTTCTGCGGC TTTTCCGGCAGTGAG TERM 2791 3030371 - 3030409 + G 74 -13.2 -3.36518 | gap 2, overlap 3030362 CTGTCGGACGTGAAG CTGGCGG-AGG-CGCTCG ATGAC CGGGCGTCCTTCCGCCGG TTCTGCGGCTTTTCC Nham_2748 3030152 - 3031087 + | transposase, IS4 TERM 2792 3031541 - 3031522 - T 70 -5 -4.43189 | overlap 3031512 3031524 ATCAATCCGAGAAAA TCGGACGA TCAA TCATCCAA AATGTTATAATCCCA Nham_2749 3032611 - 3031892 - | protein of unknown function DUF899, thioredoxin-like TERM 2793 3032762 - 3032741 - R 100 -12.3 -5.4505 | CCGCGCAACAAAAAA GCCCCGTCA TTGC TGACGAGGC TCCCTGAACGCCCGT Nham_2750 3033124 - 3032915 - | cold-shock DNA-binding domain-containing protein TERM 2794 3033146 - 3033159 + H 71 -8.1 -4.08064 | opp_overlap 3033145 3033146 GTCCTTGTTCCAAAG TGCGC AGAT GCGCA TTTTCGCGCACGATT Nham_2751 3033336 - 3033620 + | hypothetical protein TERM 2795 3033757 - 3033784 + T 79 -12.8 -3.48024 | opp_overlap 3033762, overlap 3033762 ACGAACGCAATGTAA AAAAAGCCCGGA TCGA TCCGGGCTTTTC TGTTTCGTGATCCCC TERM 2796 3033779 - 3033762 - T 100 -12.7 -5.53288 | opp_overlap 3033757 3033762 CGCAATGTAAAAAAA GCCCGGA TCGA TCCGGGC TTTTCTGTTTCGTGA TERM 2797 3033762 - 3033779 + T 100 -12.7 -4.82128 | opp_overlap 3033762, overlap 3033757 CGCAATGTAAAAAAA GCCCGGA TCGA TCCGGGC TTTTCTGTTTCGTGA Nham_2752 3035280 - 3033844 - | S-adenosyl-L-homocysteine hydrolase Nham_2753 3036713 - 3035517 - | S-adenosylmethionine synthetase TERM 2798 3035916 - 3035892 - G 74 -12.7 -3.28791 | ATCCTTGCCGGAGAA CGCGCCGCCGC CAT GCGGTGCCGCG CCGCCATAGGTATCG Nham_2754 3038123 - 3036771 - | hypothetical protein TERM 2799 3037179 - 3037216 + g 71 -9 -3.7732 | opp_overlap 3037180, overlap 3037180 ATGTATTCCTATCAA ACGCCCTCCCGGCC GTAACCCCCG GGCCAGGGGGGCGA TTATTCGTCTGGCCC TERM 2800 3037215 - 3037180 - G 81 -12.5 -3.73775 | opp_overlap 3037179 3037180 TGTATTCCTATCAAA CGCCCTCCCGGCC GTAACCCCCG GGCCAGGGGGGCG ATTATTCGTCTGGCC TERM 2801 3037180 - 3037215 + g 70 -12.5 -2.86071 | opp_overlap 3037180, overlap 3037179 TGTATTCCTATCAAA CGCCCTCCCGGCC GTAACCCCCG GGCCAGGGGGGCG ATTATTCGTCTGGCC TERM 2802 3037770 - 3037754 - G 91 -9.3 -4.56597 | CGCCCGCGTCAAAAA CCCGCAG CGC CGGCGGG CGCGGGTGGATGCTG Nham_2755 3038452 - 3039762 + | UDP-glucose 6-dehydrogenase Nham_2757 3041128 - 3040823 - | hypothetical protein Nham_2758 3041314 - 3042669 + | transposase, IS4 Nham_2759 3043219 - 3042695 - | transposase (class II) Nham_2760 3043864 - 3043406 - | hypothetical protein Nham_2761 3044102 - 3044404 + | hypothetical protein Nham_2762 3044401 - 3045510 + | hypothetical protein TERM 2803 3046259 - 3046274 + G 81 -7.6 -4.40804 | GACGAAGCACTGTTA GCTTCA AAAA TGAAGC TTTTCTGGGATAATC Nham_2763 3045512 - 3046435 + | glycosyltransferases-like TERM 2804 3047546 - 3047560 + G 71 -5.6 -4.25104 | opp_overlap 3047530 3047529 3047527, overlap 3047548 CGCGCCGATGGCGCA GCGCGA AGC TCGCTC TTTTCATGGGAACGG Nham_2764 3046445 - 3047617 + | glycosyl transferase, group 1 TERM 2805 3048665 - 3048699 + G 74 -4.9 -4.63218 | gap 1, opp_overlap 3048657 3048665, overlap 3048667 3048668 CCAACAAGCGGGAAA GCCTCGCCTCGAAGAC CCGC GCCTTCGCGGC-AGAC TTTTCTTGGGGGAAA TERM 2806 3048800 - 3048817 + G 73 -6.9 -4.30576 | CCGCAATCGATTCCA GCCGCGT TCGA AAGCGGC TTTTCGTGCTCCAGG Nham_2765 3047635 - 3048933 + | glycosyl transferase, group 1 TERM 2807 3049131 - 3049113 - g 73 -8.1 -4.10552 | CTCGAGCAAATTAAA GCTCGCC ATCCG GGCAAGC ACCTCGTTGTTATGC Nham_2766 3048930 - 3050627 + | hypothetical protein Nham_2767 3050667 - 3051443 + | nucleotidyl transferase Nham_2768 3051447 - 3052520 + | NAD-dependent epimerase/dehydratase Nham_2769 3052517 - 3053068 + | dTDP-4-dehydrorhamnose 3,5-epimerase Nham_2770 3053065 - 3054291 + | methyltransferase type 12 Nham_2771 3054288 - 3055133 + | NAD-dependent epimerase/dehydratase Nham_2772 3055617 - 3058520 + | glycosyl transferase, group 1 TERM 2808 3058539 - 3058523 - f 83 -9.4 -4.25848 | AACGGCGGAGTAAAA TCCGGC CACGC GCCGGA GTAATAGTCGGCCAC Nham_2773 3058650 - 3059807 + | transposase IS116/IS110/IS902 Nham_2774 3060483 - 3060067 - | transposase TERM 2809 3060919 - 3060940 + r 78 -11.5 -3.78775 | opp_overlap 3060918 CGGATGCTAATGCAT CCCGTCGCC TAAA GGCGAGGGG TTTACTGATCCCAGA Nham_2776 3062260 - 3061004 - | glycosyl transferase, group 1 TERM 2810 3061312 - 3061301 - G 72 -7.2 -4.11346 | opp_overlap 3061300 AGAGGGAAACAACAA GGCG ATCG CGCC CTCATATAGGCTGCG TERM 2811 3061913 - 3061899 - G 73 -11.4 -3.57792 | CCACGCACGCCGAAA CGTGCG GCA CGCACG TGGCGATAGATAACC Nham_2777 3062709 - 3063857 + | glycosyl transferase, group 1 Nham_2778 3063867 - 3064724 + | hypothetical protein TERM 2812 3065309 - 3065321 + G 80 -4.7 -4.82901 | CGAATGGATCATGGC GGGCG ATG CGGCC TTTTTGTCCAAGGCC Nham_2779 3064731 - 3065522 + | ABC transporter related Nham_2780 3065814 - 3066803 + | GDP-mannose 4,6-dehydratase Nham_2781 3066835 - 3067779 + | NAD-dependent epimerase/dehydratase TERM 2813 3068884 - 3068861 - g 73 -11 -3.57263 | opp_overlap 3068859 3068872, overlap 3068847 AGCCCGATTCGCAAA CCGCCTCG GGCTACGT CGAGGCGG GGTATCTCTGGAACA Nham_2782 3068317 - 3069729 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 2814 3070331 - 3070356 + T 87 -14.8 -3.40403 | TGCTCTGATGCATGA GGTGTCCACC AAAATA GGTGGACACC TTGTGATGGCAGACG Nham_2785 3072009 - 3070735 - | transposase, mutator type Nham_2786 3073141 - 3072389 - | IstB-like ATP-binding protein Nham_2788 3073959 - 3074243 + | hypothetical protein Nham_2789 3074414 - 3074887 + | hypothetical protein Nham_2790 3075146 - 3077224 + | recombinase Nham_2791 3078001 - 3077219 - | TRm23a transposase TERM 2815 3077408 - 3077396 - G 74 -9.1 -3.9122 | overlap 3077404 CACCCCGCCAAAGAA CCGGA ACA TCCGG ACATGGGCCTCGATC TERM 2816 3078110 - 3078078 - H 83 -8.3 -4.59773 | opp_overlap 3078079 3078101, overlap 3078063 3078079 GCCGACTTCCAAAAA CCCGGCCGGCTTC AAATCAA AATGCCGGCCGGT TTCATTTCGGAACGG TERM 2817 3078079 - 3078109 + H 85 -11.1 -4.05788 | opp_overlap 3078063 3078079 3078078, overlap 3078101 CCGACTTCCAAAAAC CCGGCCGGCTT CAAATCAAA ATGCCGGCCGG TTTCATTTCGGAACG TERM 2818 3078109 - 3078079 - H 76 -11.8 -3.35542 | opp_overlap 3078079 3078101, overlap 3078063 3078078 CCGACTTCCAAAAAC CCGGCCGGCTTC AAATCAA AATGCCGGCCGG TTTCATTTCGGAACG Nham_2792 3078099 - 3078548 + | IS66 Orf2 like TERM 2819 3079655 - 3079642 - g 91 -9.5 -4.56969 | opp_overlap 3079647 3079654, overlap 3079644 AAGGCGAGAAAGAAA GGCGG CGGC CCGCC GGAACAGGCGCTCCG Nham_2793 3078601 - 3080172 + | transposase IS66 TERM 2820 3081307 - 3081327 + T 76 -11.9 -3.37466 | overlap 3081305 GATCGGCGAGTGTGA CGATCTCTG AAT CGGAGATCG TGTTGTGTCTACGCT TERM 2821 3082187 - 3082174 - T 100 -9.5 -5.00616 | opp_overlap 3082175, overlap 3082175 GCGCCCGCCAAAAAA GGCGC GCGG GCGCC TCAATCCGGCAAGGC Nham_2796 3083329 - 3082229 - | transposase, mutator type TERM 2822 3082397 - 3082451 + g 76 -9.1 -4.08216 | gap 2 GCGCCGCCAGCTCTG GCCGATGGCGG-GGTAG-CGCTGGCCC CAG GGGCCGGCCTCGAACGCCGCCAGCGCC TTTTCGGCCGCATCG Nham_2797 3083568 - 3083344 - | phage integrase-like SAM-like TERM 2823 3083625 - 3083576 - R 89 -16.5 -3.06492 | gap 1, opp_overlap 3083590 TCAGCCATCTCAATA CTCCCGTCTGAGAGGGTG-GGCTG CAA CACCCACATCCTCTCAGGCAGGAG GCGATCTACGCCACC Nham_2798 3084564 - 3083707 - | NAD-dependent epimerase/dehydratase TERM 2824 3083864 - 3083854 - G 71 -8.2 -3.87815 | overlap 3083855 CTTCATGGCCAGAAA GGCG GCT CGCC AGACCCACGGCGGTA TERM 2825 3084330 - 3084297 - G 83 -7.3 -4.53777 | TCGAAGTAAAAACAA CCACACGCCGCAACG AGGG CGTAGCAACGCACGG CAACGCATCGGCCAG Nham_2799 3086603 - 3084702 - | polysaccharide biosynthesis protein CapD TERM 2826 3086147 - 3086168 + g 72 -7.3 -4.183 | gap 1, opp_overlap 3086138, overlap 3086138 CCAACAGCAGCGCCG GCGCGGCATC GCT GAT-TCGCGC TTTGTTACGGGTTCG TERM 2827 3086295 - 3086277 - G 100 -11.8 -4.57073 | GACTTTGCCGAAAAA GAACGTTC CCT GAACGTTC GGAGCCACAAAAATA TERM 2828 3088850 - 3088889 + G 100 -4.2 -5.60993 | gap 1, overlap 3088853 3088887 CGGACCAGGCAACCT CG-ATCGGCTTGCGGCTAG AGT TTTGGCGCAAGTCGCTGCG TTTTTTTGTAGACGC Nham_2801 3087967 - 3089271 + | O-antigen polymerase TERM 2829 3089322 - 3089307 - f 80 -10.4 -3.96327 | ATGCTGCATTAGAAA CGGTGG TCCT CCACCG GACTGGCTGCTCCCT TERM 2830 3089575 - 3089616 + G 70 -11.7 -3.16191 | gap 1, opp_overlap 3089553, overlap 3089563 3089578 ACACCGCAAGGTGGC GGT-CTTGCCGTGATCAGCG CGA CGCTGATCGTTGCAAGTATC TTCATGGCGCTGTCG TERM 2831 3089578 - 3089612 + G 83 -15.8 -3.13073 | overlap 3089575 CCGCAAGGTGGCGGT CTTGCCGTGATCAGCG CGA CGCTGATCGTTGCAAG TATCTTCATGGCGCT TERM 2832 3089752 - 3089767 + G 77 -4 -4.82901 | gap 1, overlap 3089743 TTGGTCCTGCAGACG CT-TGCC GTC GGCACAG TTTTTCTGACCGCGC Nham_2802 3089425 - 3090426 + | glycosyl transferase family protein TERM 2833 3091088 - 3091050 - g 100 -24.5 -3.59979 | overlap 3091051 CCTGTTTACGTCAAA TGGCGGGGCGGGGCGGC GCGTA GCCGCCCCGCCCCGACG ATCCCAACTCAGGCA TERM 2834 3091087 - 3091051 - g 100 -28 -2.75844 | overlap 3091050 CTGTTTACGTCAAAT GGCGGGGCGGGGCGGC GCGTA GCCGCCCCGCCCCGAC GATCCCAACTCAGGC Nham_2803 3090598 - 3091143 + | hypothetical protein Nham_2804 3092296 - 3091097 - | Serine--glyoxylate transaminase Nham_2805 3092547 - 3092816 + | hypothetical protein Nham_2806 3092922 - 3093137 + | hypothetical protein Nham_2807 3093229 - 3093666 + | histidine triad (HIT) protein TERM 2835 3093776 - 3093820 + T 100 -15.1 -4.54727 | opp_overlap 3093783 3093806, overlap 3093777 TTTTCGGGGATCATG CCATAGAGTCTCGCTTCTGAT GGA ATCAGAGGCGGGGCTCCATGA TTTTGGTTTGACGCG TERM 2836 3093777 - 3093819 + T 100 -18.6 -3.32354 | opp_overlap 3093783 3093806, overlap 3093776 TTTCGGGGATCATGC CATAGAGTCTCGCTTCTGAT GGA ATCAGAGGCGGGGCTCCATG ATTTTGGTTTGACGC Nham_2808 3094601 - 3093903 - | ABC transporter related Nham_2809 3096475 - 3094598 - | ABC transporter related Nham_2810 3097363 - 3096488 - | inner-membrane translocator TERM 2837 3097480 - 3097429 - R 89 -17.2 -3.07534 | opp_overlap 3097430, overlap 3097432 CACACTACACACATA CGACCCCCGCGCCGCGGCGG CGCTTAACCCTT CCGCCGCGGCGCCGGGACCT TTTCGATCAGGTGTA TERM 2838 3097430 - 3097479 + r 100 -16.3 -4.19258 | opp_overlap 3097429 3097432 ACACTACACACATAC GACCCCCGCGCCGCGGCGG CGCTTAACCCTT CCGCCGCGGCGCCGGGACC TTTTCGATCAGGTGT TERM 2839 3097477 - 3097432 - R 100 -19.7 -2.74865 | opp_overlap 3097430, overlap 3097429 ACTACACACATACGA CCCCCGCGCCGCGGCGG CGCTTAACCCTT CCGCCGCGGCGCCGGGA CCTTTTCGATCAGGT Nham_2811 3098839 - 3097487 - | twin-arginine translocation pathway signal TERM 2840 3097546 - 3097583 + g 77 -4.2 -4.84274 | overlap 3097542 3097543 3097549 GGATCACGCTTTCGC CGGGGACGATCTCG-ACG ATGT CGTACCAG-TCGTCCTTG TTTTTCATGTCCTTC Nham_2812 3099903 - 3099172 - | Crp/FNR family transcriptional regulator TERM 2841 3099801 - 3099782 - G 71 -4.8 -4.43213 | overlap 3099774 3099783 TTGAACACACGAAAA TCGCGAGC AAAA GCGCGCGT ACTGGCGGAGGCGAC Nham_2813 3100037 - 3100513 + | hypothetical protein Nham_2814 3101812 - 3100553 - | adenosylmethionine--8-amino-7-oxononanoate transaminase bioD 3102450 - 3101812 - | dithiobiotin synthetase TERM 2842 3101994 - 3101978 - G 78 -12.3 -3.72576 | overlap 3101991 TCTTCGCCGATGAAA GCGATGC CAA GCATCGC AACGCCCCGTGCGCG Nham_2816 3103580 - 3102447 - | 8-amino-7-oxononanoate synthase Nham_2817 3104059 - 3103730 - | stress responsive alpha-beta barrel TERM 2843 3103886 - 3103864 - G 70 -9.8 -3.6215 | opp_overlap 3103863 CGAATTCACCGTAAA CGACAACGTC GAT GTCGTTGCCG AGCTGATCCGTCTTC Nham_2818 3104314 - 3105264 + | hypothetical protein Nham_2819 3105316 - 3106299 + | quinolinate synthetase Nham_2820 3106305 - 3107825 + | L-aspartate oxidase Nham_2821 3107839 - 3108702 + | nicotinate-nucleotide pyrophosphorylase Nham_2822 3109264 - 3109001 - | hypothetical protein TERM 2844 3109473 - 3109491 + r 74 -6 -4.54047 | opp_overlap 3109475 AGCGCCTCCTCAATT GATGCATC GAT GATACATC TTTTATATAACCTCC Nham_2823 3110837 - 3109839 - | AraC family transcriptional regulator Nham_2824 3110990 - 3111796 + | hypothetical protein Nham_2825 3111824 - 3112630 + | hypothetical protein Nham_2826 3112623 - 3113927 + | twin-arginine translocation pathway signal TERM 2845 3114596 - 3114643 + G 91 -9 -4.56775 | gap 1, opp_overlap 3114628 AGTGTTGACCCGGGC GGCTCGGCGACGCGGGCCTATTG CAT CAAT-GATGCGCTGCGCCGGGCC TTTTTACGCAAACCT Nham_2827 3113927 - 3114907 + | hypothetical protein Nham_2828 3114919 - 3116592 + | hypothetical protein Nham_2829 3116735 - 3117145 + | hypothetical protein Nham_2830 3120612 - 3117154 - | hypothetical protein TERM 2846 3119961 - 3119980 + g 84 -11.4 -4.14874 | gap 1, overlap 3119960 ACGCCTCCAGATGTG CGC-GCGCG TCT CGCGCCGCG TTTTCCAACTGTTGT TERM 2847 3120411 - 3120397 - G 71 -9.2 -3.76402 | opp_overlap 3120406 ATTCGAGTGACGAAA CGCGCC GCC GACGCG CAACGTCTTGCTGTC Nham_2831 3121835 - 3120609 - | metallophosphoesterase TERM 2848 3120828 - 3120841 + g 74 -5.9 -4.43272 | GGGGGCAGCCGATCG CTGCG GTAA CGCGG TTTTCACTTTTACCT TERM 2849 3121961 - 3121984 + H 78 -8 -4.42653 | opp_overlap 3121962, overlap 3121962 TTCCGCACACATGGA AGGAGCACCC CGCG GGGTGCCCCA TTTTGTGCATAAGCT TERM 2850 3121983 - 3121962 - H 79 -13.7 -3.15999 | opp_overlap 3121961 3121962 TCCGCACACATGGAA GGAGCACCC CGCG GGGTGCCCC ATTTTGTGCATAAGC TERM 2851 3121962 - 3121983 + H 71 -11.5 -3.2511 | opp_overlap 3121962, overlap 3121961 TCCGCACACATGGAA GGAGCACCC CGCG GGGTGCCCC ATTTTGTGCATAAGC TERM 2852 3123585 - 3123573 - g 88 -7.7 -4.8622 | overlap 3123575 GCGCGCAATCAAAAA GATCG TGC CGATC ATGCAGGACGAGTTC TERM 2853 3124078 - 3124101 + G 73 -11 -3.55071 | overlap 3124079 GGACGGCACCTCGTC ATCTCCGGCA CGCA TGCCGGAGAC TTTGGACCGATGTGC TERM 2854 3124079 - 3124100 + G 75 -14.5 -2.72829 | overlap 3124078 GACGGCACCTCGTCA TCTCCGGCA CGCA TGCCGGAGA CTTTGGACCGATGTG Nham_2832 3122240 - 3124165 + | hypothetical protein TERM 2855 3124434 - 3124458 + F 79 -5.7 -4.72272 | overlap 3124435 3124438 CCGGAACGTCGAACC TTTGCGAGGTT GAA AACCTCGTAGC TTTTTGGTCCACCAG TERM 2856 3124719 - 3124700 - f 73 -11.4 -3.42699 | overlap 3124687 3124686 3124684 3124701 ACCGATGCATGAGAA CGCACCGC ATCA GCGGTGCA GGCATCGGGTGGGAC TERM 2857 3124718 - 3124701 - f 71 -12.7 -2.65298 | overlap 3124687 3124686 3124684 3124700 CCGATGCATGAGAAC GCACCGC ATCA GCGGTGC AGGCATCGGGTGGGA TERM 2858 3126204 - 3126175 - g 83 -6.4 -4.84359 | gap 1, opp_overlap 3126178, overlap 3126178 3126180 CGAGCGGGACAAAAA GAACCGCGACGCG CTCGC CGCA-CGCGGTTA TTGGCAAGCGTTTCA TERM 2859 3126201 - 3126178 - g 84 -8.1 -4.52873 | gap 1, opp_overlap 3126178, overlap 3126175 3126180 GCGGGACAAAAAGAA CCGCGACGCG CTCGC CGCA-CGCGG TTATTGGCAAGCGTT TERM 2860 3126353 - 3126377 + G 71 -4.9 -4.42464 | CTTAGGCCCGAAGCT CTGGCTGGCTA TCG TAACCATCCGG TTTATTTGCGCGGTT Nham_2833 3125189 - 3126727 + | filamentation induced by cAMP protein Fic Nham_2834 3127037 - 3128131 + | tISRso5; ISRSO5-transposase protein Nham_2835 3128513 - 3128094 - | hypothetical protein TERM 2861 3128549 - 3128536 - H 71 -8.1 -4.05788 | GCTTTTCAAATGAAA CGGTC ATTT GACCG CGATGGTCGGTGCCG Nham_2837 3128829 - 3129392 + | hypothetical protein Nham_2838 3130433 - 3129522 - | zinc finger, SWIM-type TERM 2862 3129645 - 3129659 + g 73 -3.5 -4.70879 | overlap 3129626 TGGCTTGGTCTTTCC GGCAG ATATC TTGCC TTTTTGCGCTTTGGA Nham_2839 3133138 - 3130430 - | SNF2-related TERM 2863 3132092 - 3132061 - G 83 -13 -3.93288 | gap 1 CCTCACCGAACGAAA GACCATCG-GCGGCG GCG CGGCGCTCGATGGCC TCAAATTGCTCGAGT Nham_2840 3133597 - 3133220 - | hypothetical protein Nham_2841 3135808 - 3133607 - | helicase RecD/TraA Nham_2842 3136049 - 3136444 + | hypothetical protein TERM 2864 3137017 - 3137000 - f 71 -8.3 -4.09215 | opp_overlap 3137001, overlap 3137001 GACAGCAAGCACAAA GCCCCGC TACG GCGGGGT TTCTTTATGGTGCAC TERM 2865 3137016 - 3137001 - f 73 -11.8 -3.04806 | opp_overlap 3137001, overlap 3137000 ACAGCAAGCACAAAG CCCCGC TACG GCGGGG TTTCTTTATGGTGCA TERM 2866 3137001 - 3137016 + F 100 -11.8 -4.59342 | opp_overlap 3137000 3137001 ACAGCAAGCACAAAG CCCCGC TACG GCGGGG TTTCTTTATGGTGCA Nham_2844 3137050 - 3137322 + | hypothetical protein TERM 2867 3137373 - 3137388 + F 100 -11.8 -5.27335 | opp_overlap 3137373 GTTGCCTCCACGAGA CCCCGC TCCG GCGGGG TTTTTCTTTGCGGCG TERM 2868 3137388 - 3137373 - f 70 -11.8 -2.78384 | opp_overlap 3137373 GTTGCCTCCACGAGA CCCCGC TCCG GCGGGG TTTTTCTTTGCGGCG Nham_2845 3137779 - 3138720 + | hypothetical protein TERM 2869 3139034 - 3139005 - T 82 -10.1 -4.2349 | gap 1 CTGCGATAGCCAAAA GCGTCACATGTGAC GCC GTCACAGGT-ACGC CCGATTCCTCGAACA TERM 2870 3139680 - 3139657 - T 90 -16.7 -3.24245 | overlap 3139652 TTAGCGACAAGCGAA GCCCGCCGG GGTAAG CCGGCGGGC AGAAAGATCAACCTA Nham_2846 3139909 - 3139688 - | cold-shock DNA-binding domain-containing protein TERM 2871 3140082 - 3140061 - R 100 -14.4 -5.13741 | GGAATGCAAGAAAAA CCCGCCGG TCCATG CCGGCGGG GCCTCCCAGGTCATG Nham_2848 3142217 - 3141837 - | hypothetical protein Nham_2849 3142698 - 3142276 - | twin-arginine translocation pathway signal TERM 2872 3142803 - 3142791 - R 74 -7.7 -4.13767 | CGTCGTATTCGAAAA GCCAT GCA ATGGC GGCAGCGAGACCGGC TERM 2873 3143429 - 3143458 + r 79 -5.5 -4.72272 | overlap 3143431 CCGAACCTCGATCAG GCCCGCTGCGTCG TCTC CGTTTCAGCGGCC TTTTTGGTGCAGCAG TERM 2874 3143711 - 3143688 - R 100 -13.8 -5.93252 | GCCAAAAAGAAAAAA GCCCGACGCC ATGA AGCGCCGGGC AAGTTGAGGAGCGGA Nham_2850 3144928 - 3144236 - | hypothetical protein Nham_2851 3145309 - 3145590 + | plasmid maintenance system killer Nham_2852 3145613 - 3145915 + | XRE family plasmid maintenance system antidote protein Nham_2853 3146106 - 3146453 + | hypothetical protein Nham_2854 3146806 - 3146474 - | hypothetical protein Nham_2855 3147035 - 3147421 + | ribonuclease H Nham_2856 3147418 - 3147666 + | hypothetical protein TERM 2875 3148979 - 3148949 - g 78 -4.8 -4.79955 | overlap 3148950 AGACGGAGAACAAAA CTCCCCAAAC CTCAGTCGTCC GTTTGGGGAA ATCGCAAAAAGCCGT Nham_2857 3147919 - 3148998 + | phage integrase TERM 2876 3149008 - 3148990 - T 70 -3.8 -4.70879 | opp_overlap 3148982, overlap 3148982 GGGAAATCGCAAAAA GCCGTTTA ATA TCAACAGC GTTTTCCGTTACTGG Nham_2858 3149480 - 3149148 - | hypothetical protein Nham_2859 3149758 - 3150552 + | pseudouridine synthase, RluD TERM 2877 3150596 - 3150617 + F 81 -3 -5.30348 | opp_overlap 3150605, overlap 3150605 CCAAATGGTTATGGA GGCATTAC AGGATC GTAATCCC TTTTTGTTCTTCCCT Nham_2860 3150769 - 3151668 + | RNA polymerase factor sigma-32 TERM 2878 3151717 - 3151696 - T 74 -12.9 -2.96695 | opp_overlap 3151697, overlap 3151693 CGGTTCAGGAAATCA GGGCCGGCG GCAA CGCCGGCCT TTTTGTTTGCGGCAG TERM 2879 3151697 - 3151716 + T 100 -16.4 -5.27335 | opp_overlap 3151696 3151693 GGTTCAGGAAATCAG GGCCGGCG GCAA CGCCGGCC TTTTTGTTTGCGGCA Nham_2861 3153253 - 3151988 - | diguanylate cyclase TERM 2880 3153086 - 3153068 - G 78 -3 -5.0133 | overlap 3153070 TACCGCGGTAAAAAA GGCGGC GACGTAG GCAGCC GAGGCCCAATATCGT TERM 2881 3153636 - 3153663 + r 83 -13.4 -3.55444 | GTAAGCTTTGCAGCG GCTCGGGTGGGG TTCG CTTCGCCCGAGC TTTCCAGAGTGGGCG Nham_2862 3154652 - 3153834 - | lytic murein transglycosylase TERM 2882 3154735 - 3154718 - g 73 -8.3 -4.08216 | opp_overlap 3154717 3154719 3154730, overlap 3154719 CGATCGTCGTCAAAA GCGGCCC TCGT GGGCCGG CCGTTTGCAGGCCTG TERM 2883 3154865 - 3154876 + G 86 -7.2 -4.72333 | opp_overlap 3154858 3154854 GGAACCAACCCGAAG GGCG AGTT CGCC TTTTTCAATGTCCTT Nham_2863 3154694 - 3155071 + | hypothetical protein Nham_2864 3155553 - 3156884 + | twin-arginine translocation pathway signal TERM 2884 3156913 - 3156902 - g 83 -7.2 -4.62872 | opp_overlap 3156900 3156902 ATGAATGTTCAAAAA CGGC CCAG GCCG TCGTTTTTTGATTCG TERM 2885 3157252 - 3157262 + G 73 -8.2 -3.99324 | opp_overlap 3157237 3157236 GCCGCATCGATTTTC GCGG CGG CCGC TTTCTCGTGGTCACC Nham_2865 3156891 - 3157619 + | hypothetical protein Nham_2866 3160005 - 3157852 - | RNA polymerase sigma factor RpoD TERM 2886 3158041 - 3158066 + g 100 -17.7 -3.54459 | opp_overlap 3158047, overlap 3158044 TTCTTCGCGCGGGGT CAACGACGCGA GAAC TCGCGTCGTTG TTTCACGAAGATTGC TERM 2887 3158044 - 3158063 + g 86 -13.6 -3.90922 | opp_overlap 3158047, overlap 3158041 TTCGCGCGGGGTCAA CGACGCGA GAAC TCGCGTCG TTGTTTCACGAAGAT TERM 2888 3159908 - 3159960 + g 77 -3.8 -4.95876 | overlap 3159905 3159908 GACAGGTCGAGCAGC GGCGACGGCGCGTCCGCAGCATCC TTCTC GGGGGCGTCGGCTGCCTTGTCGTC TTTTTCCTTGTCCTT TERM 2889 3160063 - 3160078 + r 86 -11.8 -4.08485 | opp_overlap 3160060 3160061 TCCCCCGTGAAACCC GCGCCG CGTC CGGCGC TTTGATTTGCGTCGC TERM 2890 3160129 - 3160108 - R 77 -10.8 -3.93695 | CTCACGACGCACAAA GGGCGGCG CAATCT CGCCACCC CGTCAACCCTTTCCG dnaG 3162658 - 3160757 - | DNA primase TERM 2891 3161216 - 3161200 - G 90 -2.1 -5.41143 | overlap 3161202 3161203 GACTTGTCAAAAAAA CATCGAG TTT CTCGGGG AATTGCAAGCGCAAG TERM 2892 3161449 - 3161436 - G 84 -8.1 -4.42062 | GAGGTTCTAAAGAAA GCCGT GTTG ACGGC CGGGTCCTGAATGGT TERM 2893 3161825 - 3161801 - G 74 -12.1 -3.53012 | CTGCTCTTCCGTAAA CGCGGTCCCCA TGG TGGCGACCACG GCCTTGATCCCGGCC TERM 2894 3163721 - 3163706 - g 82 -6 -4.85599 | overlap 3163707 TTGATCGGAGAAAAA GCCGGG CAAG CCCGGT GGGCGGAGCGGCAGA Nham_2868 3162947 - 3163795 + | N-formylglutamate amidohydrolase TERM 2895 3163826 - 3163845 + T 90 -16.4 -3.55622 | opp_overlap 3163826 ATCCGATACGGCAAA GGCCCCGG AGGT CCGGGGCC TTTGCACCGCTTCAA TERM 2896 3163845 - 3163826 - T 100 -16.4 -3.63805 | opp_overlap 3163826 ATCCGATACGGCAAA GGCCCCGG AGGT CCGGGGCC TTTGCACCGCTTCAA Nham_2869 3164046 - 3163882 - | hypothetical protein Nham_2870 3164832 - 3164377 - | hypothetical protein TERM 2897 3165892 - 3165861 - g 75 -3 -4.87626 | gap 1, overlap 3165891 CGCGAAGACGAAAAA GATGCATCAGGGCCA TCA CGGCGCCAAT-CATC CGGTCCGGGACGAGA TERM 2898 3165932 - 3165944 + G 72 -7.7 -4.13767 | AGGTGGAGATCACCT CCATG AAT CATGG TTTTGCCGTAGACGA Nham_2871 3164959 - 3166149 + | carbamoyl phosphate synthase small subunit TERM 2899 3166254 - 3166286 + T 81 -15.6 -2.52896 | gap 1, opp_overlap 3166227 AGCGGCATCGACTCG GCAGCGTGCACGGCG GCTT CGCCGCG-ACGCTGC TGGATTCCGCGATGG Nham_2872 3166861 - 3166322 - | Ferritin and Dps Nham_2873 3167031 - 3167756 + | methyltransferase type 12 TERM 2900 3168323 - 3168289 - T 78 -6.2 -4.63527 | opp_overlap 3168312, overlap 3168290 3168295 TGACGACGCGAAAAA TCACAACGGCCGCAGA GAA CCCGCTGCCGTGGCGG TCGTAATTATGATGG Nham_2874 3169037 - 3168606 - | hypothetical protein TERM 2901 3169141 - 3169154 + H 78 -8.1 -4.49556 | overlap 3169140 AGACGGGTTCTCTCG TCGGC GGCC GCCGA TTTGTTTCATACCCC TERM 2902 3169350 - 3169329 - H 82 -13.7 -3.28712 | gap 1, opp_overlap 3169330, overlap 3169296 3169330 CGCGCTCTTGCACAA GGGACGCGCG GCA CGCGCG-CCC TTTTTTTGTGCCCAG TERM 2903 3169330 - 3169350 + H 100 -13.9 -5.60993 | opp_overlap 3169296 3169329 3169330 GCGCTCTTGCACAAG GGACGCGCG GCA CGCGCGCCC TTTTTTTGTGCCCAG TERM 2904 3169350 - 3169330 - H 84 -16.1 -2.57132 | opp_overlap 3169330, overlap 3169296 3169329 GCGCTCTTGCACAAG GGACGCGCG GCA CGCGCGCCC TTTTTTTGTGCCCAG TERM 2905 3170492 - 3170473 - g 85 -10 -4.26076 | gap 1 GCACTCGCATCAAAA GCGA-CGGG CTT CCCGATCGC CAAGGTCGCGGCAAA TERM 2906 3170815 - 3170805 - g 71 -8.2 -3.8512 | overlap 3170806 GAGCGACGACAAGAA CGCG ATC CGCG CAGCGCTCGGCACGC carB 3169384 - 3172848 + | carbamoyl phosphate synthase large subunit greA 3173354 - 3173830 + | transcription elongation factor GreA Nham_2877 3174377 - 3173961 - | hypothetical protein TERM 2907 3174147 - 3174157 + g 73 -3.2 -4.8048 | TCGCTGCCACTTTGC TCGA ATA TCGG TTTTTCCTGTCAGCC Nham_2878 3174395 - 3174793 + | DoxX Nham_2879 3175351 - 3174872 - | AsnC family transcriptional regulator Nham_2880 3175622 - 3176587 + | thioredoxin reductase Nham_2881 3176590 - 3177513 + | LysR family transcriptional regulator TERM 2908 3177761 - 3177731 - T 88 -11.2 -4.2331 | opp_overlap 3177732, overlap 3177727 3177724 3177732 3177755 AATCAAAATCACAAA GCCCCGCTTCTGAT TCC ATCAGAAGCGGAAA GATTTTACGCTGCGT TERM 2909 3177760 - 3177732 - T 83 -14.7 -3.12359 | opp_overlap 3177732, overlap 3177727 3177724 3177731 3177755 ATCAAAATCACAAAG CCCCGCTTCTGAT TCC ATCAGAAGCGGAA AGATTTTACGCTGCG Nham_2882 3178446 - 3177766 - | cobyrinic acid a,c-diamide synthase Nham_2883 3178925 - 3178614 - | hypothetical protein TERM 2910 3178811 - 3178765 - G 76 -7.2 -4.3898 | overlap 3178770 3178772 3178807 AGCACCGGTAGAAAA CTGAAGATGCCGCCGACGATCA GCA TGATCGCCAGCGGAATACGCAC CAGCCGCGACGACGG TERM 2911 3178806 - 3178770 - G 74 -12.3 -3.41587 | overlap 3178765 3178772 CGGTAGAAAACTGAA GATGCCGCCGACGATCA GCA TGATCGCCAGCGGAATA CGCACCAGCCGCGAC TERM 2912 3178804 - 3178772 - G 82 -14.9 -3.273 | overlap 3178770 3178765 GTAGAAAACTGAAGA TGCCGCCGACGATCA GCA TGATCGCCAGCGGAA TACGCACCAGCCGCG Nham_2884 3179343 - 3179167 - | hypothetical protein TERM 2913 3179648 - 3179630 - R 78 -8.8 -4.1466 | overlap 3179642 AGGTAAGGGTGAAAA GGTGCGGT AAG AGCGCACC GCGTCTCCGGCAACG TERM 2914 3179952 - 3179992 + r 88 -14.8 -3.53012 | gap 1, opp_overlap 3179959 AAACGCGTTTCACTG TGAATGAGGGGTTCGGCGT ACCC ACGCCGGACCCCTCGC-CA TTTCGGAAAACCCGC TERM 2915 3179986 - 3179959 - R 87 -17 -2.72344 | opp_overlap 3179952 TTTCACTGTGAATGA GGGGTTCGGCGT ACCC ACGCCGGACCCC TCGCCATTTCGGAAA Nham_2885 3181255 - 3180050 - | extensin-like TERM 2916 3180145 - 3180171 + g 71 -9.2 -3.72893 | opp_overlap 3180149, overlap 3180146 GCTCGCGACCGGCAT ACGAGCCGCGCG CGG CGCGCGCCGCGA TTTCCTCGCCCGATA TERM 2917 3180146 - 3180170 + g 70 -12.7 -2.83522 | opp_overlap 3180149, overlap 3180145 CTCGCGACCGGCATA CGAGCCGCGCG CGG CGCGCGCCGCG ATTTCCTCGCCCGAT TERM 2918 3180169 - 3180149 - G 71 -13.9 -2.62983 | opp_overlap 3180146 3180145 GCGACCGGCATACGA GCCGCGCGC GGC GCGCGCCGC GATTTCCTCGCCCGA Nham_2886 3181792 - 3183348 + | hypothetical protein Nham_2887 3183641 - 3183429 - | hypothetical protein TERM 2919 3183761 - 3183737 - R 100 -17.1 -4.53303 | opp_overlap 3183735 3183734 TACCGCCACACAAAA CGCGCCCGGCC AAA AACCGGGCGCG CCGTTGTTAAACCGT Nham_2888 3184310 - 3183786 - | PRC-barrel TERM 2920 3183887 - 3183916 + g 74 -15 -2.62184 | overlap 3183892 TCTTCGTGTTCGTCG CTGCAGGCGCGG ATGTCG CCGCGCCTGTGG TGGTCTCCGAACGCA Nham_2889 3184882 - 3184682 - | hypothetical protein Nham_2890 3185127 - 3185603 + | lytic transglycosylase, catalytic TERM 2921 3185738 - 3185699 - f 74 -12.8 -2.89881 | opp_overlap 3185693 CAGGGAGCTGAGATA CCGCAAGCTCGCAATCCG AAGA CGGATTGCAGGACCGCGG TGACCCTTTGAACCT Nham_2891 3185784 - 3186800 + | glycine oxidase ThiO TERM 2922 3186943 - 3186933 - g 86 -8.2 -4.56597 | CGTGCTGCCGAAAAA CCGC TGG GCGG ACACGGTTCTGAAAA Nham_2892 3186805 - 3187002 + | thiamine biosynthesis protein ThiS TERM 2923 3187364 - 3187384 + G 71 -9 -3.695 | CTGGTCGAAGCCGCC GCCGTTCT CATCA AGGACGGC TTTAAGGTGTTTCCC TERM 2924 3187667 - 3187708 + G 79 -13.5 -3.53224 | opp_overlap 3187632 GATCCCGTCGCCATG GCCGGCGCGTTCAGCCTCG CGGT CGAGGCCGGCCGCACCGCC TTTGAGGCGGGCCTG thiG 3187013 - 3187795 + | thiazole synthase Nham_2894 3187782 - 3188408 + | thiamine-phosphate diphosphorylase Nham_2895 3188418 - 3188804 + | hypothetical protein Nham_2896 3188833 - 3190764 + | thiamine biosynthesis protein ThiC TERM 2925 3190892 - 3190860 - T 100 -22.1 -3.3514 | opp_overlap 3190865 3190868, overlap 3190861 3190868 ATCGAGACGCTATAA CGCAACAAGGCCCCG CGT CGGGGCCTTGTTGCT ATGCGCAATCGCCTT TERM 2926 3190891 - 3190861 - T 100 -25.6 -2.60763 | opp_overlap 3190865 3190868, overlap 3190860 3190868 TCGAGACGCTATAAC GCAACAAGGCCCCG CGT CGGGGCCTTGTTGC TATGCGCAATCGCCT TERM 2927 3190865 - 3190887 + T 100 -19.2 -3.2614 | opp_overlap 3190861 3190860 3190868, overlap 3190868 GACGCTATAACGCAA CAAGGCCCCG CGT CGGGGCCTTG TTGCTATGCGCAATC TERM 2928 3190884 - 3190868 - T 95 -15.1 -3.75766 | opp_overlap 3190865 3190868, overlap 3190861 3190860 GCTATAACGCAACAA GGCCCCG CGT CGGGGCC TTGTTGCTATGCGCA TERM 2929 3190868 - 3190884 + T 95 -15.1 -3.7732 | opp_overlap 3190868 3190861 3190860, overlap 3190865 GCTATAACGCAACAA GGCCCCG CGT CGGGGCC TTGTTGCTATGCGCA Nham_2897 3191405 - 3190995 - | hypothetical protein TERM 2930 3191435 - 3191474 + r 71 -10.7 -3.48738 | overlap 3191433 3191436 GTCTATTGCTTTGCG CCGGCGGGTCGGTG-CGGC GCTC GCCGACACGGACC-GCCGC TATTTCATCGTGATC TERM 2931 3191436 - 3191473 + r 78 -14.2 -2.68761 | overlap 3191435 3191433 TCTATTGCTTTGCGC CGGCGGGTCGGTG-CGGC GCTC GCCGACACGGACC-GCCG CTATTTCATCGTGAT Nham_2898 3191908 - 3191474 - | hypothetical protein TERM 2932 3191648 - 3191682 + g 79 -9.3 -4.18018 | opp_overlap 3191631 GGCGACATCGGAAGG CCG-GCTGATGTGGCTG ACG CGGCCGCG-CAGCACGG TTTTCGATCCGCCGA Nham_2899 3192122 - 3192541 + | protein of unknown function DUF395, YeeE/YedE TERM 2933 3192666 - 3192676 + G 76 -6.8 -4.46212 | overlap 3192657 TTCGGCGCGTGGGAT GCGA CGC TCGC TTTTGTGATGGCGGG TERM 2934 3192781 - 3192762 - g 70 -7.9 -4.07568 | CTGCTGGCGGGAAAA CTGCGAT GGCCTG ATCGCAG CGATATCGATGCATC Nham_2900 3192546 - 3193034 + | protein of unknown function DUF395, YeeE/YedE Nham_2901 3193236 - 3193490 + | response regulator receiver domain-containing protein TERM 2935 3194150 - 3194184 + G 76 -9.2 -3.97947 | gap 1, opp_overlap 3194125, overlap 3194151 GCCAGCATCGCATGA TCGGGCGGCAGCCGC GCGACG GCGGC-GATGCCCGG TTTGTCATCGATGGC TERM 2936 3194665 - 3194689 + G 76 -7.8 -4.30576 | gap 1, opp_overlap 3194664, overlap 3194666 3194666 GTCGGCGTGCAATAT TC-CGTCGCCG ATCG CGGCGACGAGC TTTTAATCCTCACAA TERM 2937 3194751 - 3194706 - g 76 -10.3 -3.89614 | gap 1 TTTAATCCTCACAAA CGCCGACGGCGCCATCGACTTC AAG GTCGT-GATCGCGCCGCTGGCG GCGCCCGAGCGCGCA Nham_2902 3193816 - 3195909 + | oligopeptidase B TERM 2938 3195926 - 3195947 + T 95 -17.3 -3.53012 | opp_overlap 3195926 CGCGAGCACAAAAAA GCCGGCGCT CGAC AGCGCCGGC TTTCGGAAAGCAGGA TERM 2939 3195947 - 3195926 - T 100 -17.3 -5.31275 | opp_overlap 3195926 CGCGAGCACAAAAAA GCCGGCGCT CGAC AGCGCCGGC TTTCGGAAAGCAGGA Nham_2903 3196453 - 3195971 - | bacterioferritin TERM 2940 3196509 - 3196490 - R 71 -10.7 -3.57144 | GCTTTGACGCTGAAA GGCTGGC CGTCGC GCCAGCC AACCCAGTTTAGAAT Nham_2904 3196889 - 3196632 - | putative bacterioferritin Nham_2905 3197184 - 3197507 + | hypothetical protein TERM 2941 3197608 - 3197582 - f 85 -11 -4.03413 | overlap 3197583 AGCGTCGCATACAAA GGCCTGAAAAAA CCG TTTTTTCAGGCA AGTGACCTGCGAACG TERM 2942 3197607 - 3197583 - f 82 -14.5 -3.01726 | overlap 3197582 GCGTCGCATACAAAG GCCTGAAAAAA CCG TTTTTTCAGGC AAGTGACCTGCGAAC TERM 2943 3197819 - 3197847 + G 75 -12.3 -3.64487 | overlap 3197820 GGCTCCGCAGGCCCA TGCCGGCGGCGGT GAC GTCGCAGCCGGCG TTCTTGGCGGTCTGG TERM 2944 3197820 - 3197846 + G 72 -13.6 -2.78371 | overlap 3197819 GCTCCGCAGGCCCAT GCCGGCGGCGGT GAC GTCGCAGCCGGC GTTCTTGGCGGTCTG Nham_2906 3197742 - 3198026 + | hypothetical protein TERM 2945 3198078 - 3198061 - T 83 -14.1 -3.07013 | opp_overlap 3198061 GACCCCCTGAAGAGA CCCGGCC TCAC GGCCGGG TTTTTCTTTTGACGT TERM 2946 3198061 - 3198078 + T 100 -14.1 -5.46706 | opp_overlap 3198061 GACCCCCTGAAGAGA CCCGGCC TCAC GGCCGGG TTTTTCTTTTGACGT Nham_2907 3199361 - 3198102 - | lytic murein transglycosylase TERM 2947 3199285 - 3199252 - G 86 -11.7 -4.17491 | gap 1 ATGAAACGCGCAAAA CCGGCGT-CCGCCG CGTGCGC CGGCGGCACTCCGG CTCCAAGAGCGAGCG Nham_2908 3199957 - 3199364 - | hypothetical protein Nham_2909 3200843 - 3200073 - | trans-aconitate 2-methyltransferase TERM 2948 3200352 - 3200312 - G 70 -13.1 -2.87564 | opp_overlap 3200301 3200300 3200306 CGATGTGCTGACACA GCGGCCGCAGCGCGTCG TAGTAGG CGCCGGGCCGCGGCAGC ACGTCTTTCGCCCGC Nham_2910 3202934 - 3200952 - | hypothetical protein TERM 2949 3201912 - 3201894 - G 72 -12.4 -3.28924 | overlap 3201865 CAGCGCGGTCCAGAA CGTCGCCG AGG CGACGACG GCCACCGGCGACAAT TERM 2950 3202229 - 3202211 - G 82 -5.8 -4.91109 | opp_overlap 3202215, overlap 3202213 CCTGCATCAGAAAAA GACGGCTG AGG CGGCCGGC CGCGTCGTCGATCGC Nham_2911 3204701 - 3203049 - | putative ABC transporter ATP-binding protein Nham_2912 3204935 - 3205141 + | hypothetical protein TERM 2951 3205351 - 3205316 - T 87 -15.5 -3.23447 | overlap 3205314 GCAAGCTCGATAACA CCGTGCTGACGCCGC ATCTCG ACAACGTCAGCACGG AAAACTATCGGCACT Nham_2914 3206761 - 3205697 - | ErfK/YbiS/YcfS/YnhG Nham_2915 3207050 - 3207799 + | hypothetical protein Nham_2916 3208666 - 3207806 - | 3-mercaptopyruvate sulfurtransferase TERM 2952 3208721 - 3208705 - R 71 -12.3 -2.87564 | opp_overlap 3208704 TCATTGCCGGACATA GCCGTTC GAA GAACGGC GTCGCTTCCGCTTGC Nham_2917 3209280 - 3208867 - | rhodanese-like protein TERM 2953 3209447 - 3209461 + H 76 -4.9 -4.80882 | CGGCGACACTCACTA GCTGG ACCTG CCGGC TTTTTCCTCTAGGAT TERM 2954 3209704 - 3209735 + G 93 -8.6 -5.00884 | overlap 3209696 3209705 3209706 GTCGCCGGCTGGCTT TTGCCGCTGTTCGG AGTT CTGATCGGCGGCGG TTTTTTCGCCCAGGT TERM 2955 3209705 - 3209734 + G 70 -9.9 -3.60048 | overlap 3209696 3209704 3209706 TCGCCGGCTGGCTTT TGCCGCTGTTCGG AGTT CTGATCGGCGGCG GTTTTTTCGCCCAGG Nham_2918 3209569 - 3209814 + | transglycosylase-associated protein Nham_2919 3210458 - 3209865 - | GCN5-related N-acetyltransferase TERM 2956 3210517 - 3210505 - R 100 -9.1 -4.99638 | opp_overlap 3210505 AGATCGAGACAAAAA CTGGC AAA GCCAG TTTTACTCTCGGCTC TERM 2957 3210505 - 3210517 + r 81 -9.1 -4.35116 | opp_overlap 3210505 AGATCGAGACAAAAA CTGGC AAA GCCAG TTTTACTCTCGGCTC Nham_2920 3211034 - 3210678 - | hypothetical protein TERM 2958 3210726 - 3210737 + g 78 -3.6 -5.00616 | overlap 3210719 3210721 GTCCTCCTTCGCCGG CGGC TGCG GCTG TTTTTTCCGCGCCGC Nham_2921 3211386 - 3212186 + | hypothetical protein Nham_2922 3212266 - 3212502 + | hypothetical protein TERM 2959 3213190 - 3213229 + G 80 -14.8 -3.21747 | opp_overlap 3213164, overlap 3213191 AGTGTGGACGCCGCA CCGCCCGCCGCGCCCGGA GAAA TCCGAGGGCGGCGTGCGC TTCGTCATCAAGTCC TERM 2960 3213191 - 3213228 + G 86 -18.3 -2.52834 | opp_overlap 3213164, overlap 3213190 GTGTGGACGCCGCAC CGCCCGCCGCGCCCGGA GAAA TCCGAGGGCGGCGTGCG CTTCGTCATCAAGTC Nham_2923 3212573 - 3215608 + | excinuclease ABC subunit B Nham_2924 3215805 - 3216305 + | hypothetical protein TERM 2961 3216953 - 3216931 - g 100 -20.6 -3.85698 | CTTCCCGCGGAGAAA GCCAGCGCCG AGG CGGCGCTGGC ACAGGCGCAGGTCGA Nham_2925 3216298 - 3217530 + | hypothetical protein TERM 2962 3217826 - 3217804 - g 78 -9.8 -4.0044 | overlap 3217805 AAGCAGCAGCACAAA GGCCTGACGG CGG CCGTCAAGGC GCGGCGCGCACGCTA TERM 2963 3218001 - 3217962 - g 74 -12.6 -3.29043 | AATGTCGGCCGACAA CGCCGCCGACAGCTACGC GCGA GCGATGCGGCGGGCGGCG GATGCGCTCGCGGCG Nham_2926 3217747 - 3218091 + | hypothetical protein Nham_2927 3218420 - 3218097 - | hypothetical protein TERM 2964 3218173 - 3218210 + g 73 -11.2 -3.53811 | gap 2, opp_overlap 3218167 3218166 AGCAGGAATTCGCCG CGCGCCAGCGTCGCGCCG CTCG CGGC-CGTCAC-GGCGCG TTTCGGACAGATCCC Nham_2928 3218482 - 3219420 + | hypothetical protein Nham_2929 3219586 - 3220008 + | hypothetical protein Nham_2931 3220762 - 3220289 - | transposase TERM 2965 3221239 - 3221279 + G 90 -15.3 -3.72893 | opp_overlap 3221234 CTGCAACTGATCCTC GCCGCGGCGGCAATCGCCG CGC TGGTGATCGCGGCGGCGGC TTTCCTGCGACCATG Nham_2932 3220933 - 3221295 + | hypothetical protein Nham_2933 3221496 - 3222710 + | response regulator receiver/diguanylate phosphodiesterase TERM 2966 3222737 - 3222713 - T 71 -10.9 -3.28712 | opp_overlap 3222713 TCCCGTTGCCTAGAA TCTGATTCAAC TGC ATTGAATCAGA TTCTAAACGGGTTAG Nham_2934 3224183 - 3223152 - | transposase IS116/IS110/IS902 TERM 2967 3224185 - 3224195 + r 83 -5.4 -4.93877 | ATAATCTTCTCCATG GGAA CGG TTCC TTTTGTTTCGTGGCG Nham_2935 3224451 - 3224218 - | hypothetical protein TERM 2968 3224759 - 3224729 - H 100 -14.7 -4.07568 | overlap 3224730 TCCCGCGCCCGAAAA CCCGCGCATCGGG CCCTC CCCGATGCGCGAT CCCATGGCCGTTCGC TERM 2969 3224758 - 3224730 - H 100 -18.2 -3.04398 | overlap 3224729 CCCGCGCCCGAAAAC CCGCGCATCGGG CCCTC CCCGATGCGCGA TCCCATGGCCGTTCG TERM 2970 3224969 - 3225006 + G 84 -8.3 -4.46155 | gap 1, opp_overlap 3224980, overlap 3224991 CAGGCGGGACGCTAT CTGCCGGAATATCGCGAG CTG CGCGCGAAAG-CCGGCGG TTTTCTCGATCTCTG hemE 3224870 - 3225922 + | uroporphyrinogen decarboxylase Nham_2937 3226399 - 3226106 - | SirA-like TERM 2971 3226168 - 3226180 + g 87 -6.2 -5.14563 | GGTCCTCCAGCGACG GCGG CGCTC CCGC TTTTTTGATCAGGAA Nham_2938 3227069 - 3226530 - | methionine sulfoxide reductase A TERM 2972 3227562 - 3227542 - g 71 -13.3 -3.06261 | opp_overlap 3227540 3227539 ATACCGATACAGATA CGAGGCGGA CGC TCCACCTCG AGGTTCTTCTGGACA Nham_2939 3227436 - 3227666 + | hypothetical protein TERM 2973 3227830 - 3227775 - T 75 -9.8 -3.90112 | gap 3, opp_overlap 3227781, overlap 3227778 TCGGCCTCAACGAAA CATGCCGCGCGCGCGTTGCCCAAATGC TTGCC GCTTTTGGGC-AC-CGT-CGCGGCTTG TTCCGGCAGCCGACG TERM 2974 3227781 - 3227827 + T 83 -13.8 -3.61398 | opp_overlap 3227778 3227775 TCAACGAAACATGCC GCGCGCG-CGTTGCCCAAATGC TTGCC GCTTTTGGGCACCGTCGCG-GC TTGTTCCGGCAGCCG TERM 2975 3227974 - 3227961 - T 84 -3.7 -5.27335 | opp_overlap 3227961 CGCGTCAAACAAAAA GCTGG AGCC CCGGC TTTGATTCCATCAGA Nham_2940 3228625 - 3228152 - | hypothetical protein TERM 2976 3229019 - 3229032 + H 74 -2.3 -5.00884 | AACTGGACGCCGAAG CCGAA CGTG TGCGG TTTTTTAGAACGCCT TERM 2977 3229667 - 3229644 - g 100 -7.4 -5.48825 | gap 1, overlap 3229646 3229664 3229665 GAGGACGGAAAAAAA CGGACCTGGCC AGC GACCAAG-CCG ATGCCGGCGAACATC TERM 2978 3230249 - 3230219 - g 77 -13.3 -3.53779 | gap 1, overlap 3230215 GGTTGAAAATACCAA GAGCGCGA-CGCCG GATG CGGCGCTGGCGCTC AAAATCGCGGTGCCG Nham_2941 3229167 - 3230714 + | tyrosinase Nham_2942 3230738 - 3231190 + | hypothetical protein Nham_2943 3232342 - 3231287 - | two component LuxR family transcriptional regulator Nham_2944 3233090 - 3232557 - | hypothetical protein Nham_2945 3233253 - 3233804 + | hypothetical protein Nham_2946 3234095 - 3234967 + | hypothetical protein TERM 2979 3234981 - 3235004 + F 100 -19.6 -5.40474 | AACCTGCCTTTCGGG CCTGCGCGGC AATC GCCGCGCAGG TTTTTTTGCCCGGCT TERM 2980 3236769 - 3236750 - g 72 -7.8 -4.18494 | opp_overlap 3236750 3236761, overlap 3236737 CATGGCGACCCAAAA CGTCGCCA CGGG CGGCAACG TTCTCAGCAACGACG Nham_2947 3235113 - 3237032 + | hypothetical protein TERM 2981 3237705 - 3237694 - g 81 -7.2 -4.41241 | GAAATCGGCACAAAA CGGC TCGA GCCG GGAGTTTCAGACCCT Nham_2948 3237074 - 3239089 + | Type I secretion system ATPase, PrtD TERM 2982 3240297 - 3240273 - g 77 -4.2 -4.91109 | gap 1, overlap 3240282 CGCCGACGAGAAAAA GTCGCAACAGC TCGG GCCGA-GCGAC ATCTATGTGGTGCGC Nham_2949 3239128 - 3240471 + | Type I secretion membrane fusion protein, HlyD Nham_2951 3241659 - 3241141 - | hypothetical protein Nham_2952 3242022 - 3241666 - | ModE family transcriptional regulator Nham_2953 3243032 - 3242241 - | ModE family transcriptional regulator TERM 2983 3243290 - 3243265 - R 100 -20.5 -4.56914 | opp_overlap 3243265 TTATCCAAATTAAAA CGGGTCGGAGC TATT GCTCCGACCCG TTTCTGCGGCACTGG TERM 2984 3243265 - 3243290 + r 100 -20.5 -3.86346 | opp_overlap 3243265 TTATCCAAATTAAAA CGGGTCGGAGC TATT GCTCCGACCCG TTTCTGCGGCACTGG Nham_2954 3244360 - 3243464 - | aspartate/glutamate/uridylate kinase TERM 2985 3244901 - 3244923 + G 84 -15.6 -3.30124 | GGAGCGGATGCGCCG CCTGGTGGCG CGA CGCTACCAGG TTGTCCGGCATCGGA TERM 2986 3245748 - 3245735 - g 100 -9.5 -5.00616 | opp_overlap 3245736, overlap 3245736 GCGCCCGCCAAAAAA GGCGC GCGG GCGCC TCAATCCGGCAAGGC Nham_2955 3244536 - 3245771 + | transposase IS116/IS110/IS902 Nham_2956 3246718 - 3245906 - | aspartate/glutamate/uridylate kinase TERM 2987 3249165 - 3249183 + G 76 -8.8 -4.11484 | opp_overlap 3249158 AACCACAACTGGAAC CCGTACTG GAG CAGTTCGG TTTTCGGCGGTTACG Nham_2957 3248019 - 3249512 + | putative porin TERM 2988 3249564 - 3249541 - T 88 -13.8 -3.67052 | opp_overlap 3249542, overlap 3249542 ACATGCTGAAGAGAA CCCCCGGCAG GAAA CTGCCGGGGT TTTGTTTTGCCGGCG TERM 2989 3249542 - 3249563 + T 100 -17.3 -5.07652 | opp_overlap 3249541 3249542 CATGCTGAAGAGAAC CCCCGGCAG GAAA CTGCCGGGG TTTTGTTTTGCCGGC TERM 2990 3249563 - 3249542 - T 89 -17.3 -2.79749 | opp_overlap 3249542, overlap 3249541 CATGCTGAAGAGAAC CCCCGGCAG GAAA CTGCCGGGG TTTTGTTTTGCCGGC Nham_2958 3251221 - 3249704 - | hypothetical protein Nham_2959 3251745 - 3251335 - | hypothetical protein TERM 2991 3251609 - 3251555 - G 74 -2.1 -4.87665 | gap 1, opp_overlap 3251563, overlap 3251563 3251564 CGCGATTTAGAAAAA TTGAGAAACTCGGCAGTCATCACGAC GCAG ACCGTG-TGACTGCCAACGTCCTCTG TCCCAGTGTCGCAGC TERM 2992 3251601 - 3251563 - G 70 -7.5 -4.10363 | gap 1, opp_overlap 3251563, overlap 3251555 3251564 AGAAAAATTGAGAAA CTCGGCAGTCATCACGAC GCAG ACCGTG-TGACTGCCAAC GTCCTCTGTCCCAGT Nham_2960 3252187 - 3252834 + | ThiJ/PfpI TERM 2993 3253238 - 3253227 - f 83 -5.8 -4.89852 | overlap 3253210 3253229 CTATAGCGAGAAAAA TCGC TGCA GCGA AGCCCATCGCTCCGA TERM 2994 3253334 - 3253316 - f 78 -3 -5.093 | overlap 3253319 3253321 CCCAAAATAAGAAAA CGATATGC GCC GCATTGCG ACCCAAACGCCAGGA TERM 2995 3253918 - 3253885 - f 78 -8.7 -4.11216 | opp_overlap 3253907 3253908, overlap 3253886 3253908 CGTGCACGGTCAAAA GCGTGCGGGCGTGGC TGAT ACCACGACCGGACGA AATACGAGTCCGTAC TERM 2996 3253917 - 3253886 - f 73 -12.2 -3.06515 | opp_overlap 3253907 3253908, overlap 3253885 3253908 GTGCACGGTCAAAAG CGTGCGGGCGTGGC TGAT ACCACGACCGGACG AAATACGAGTCCGTA Nham_2961 3254010 - 3257699 + | nitrate reductase, alpha subunit TERM 2997 3257781 - 3257748 - T 82 -13.8 -3.23692 | GATCATGATCATGAA CCGGCTCCGGCGCA TTTCGG TGCGCCTGAGCGGG TTAGCGTCGGGAAAT Nham_2963 3259145 - 3258336 - | uroporphyrinogen III synthase HEM4 Nham_2964 3259484 - 3259146 - | nitrite reductase (NAD(P)H) large subunit, NirD Nham_2965 3261937 - 3259484 - | nitrite reductase (NAD(P)H) large subunit, NirB TERM 2998 3261288 - 3261240 - G 71 -9.3 -3.73224 | opp_overlap 3261243, overlap 3261241 TCAGCCGGCACGAAA CGCCCATCGGCCAGCGTCACGCC CTC GGCGCGGTGCTTGCCGACGATCT CCTCGGTCTGGCCGT TERM 2999 3261287 - 3261241 - G 70 -12.8 -2.8372 | opp_overlap 3261243, overlap 3261240 CAGCCGGCACGAAAC GCCCATCGGCCAGCGTCACGCC CTC GGCGCGGTGCTTGCCGACGATC TCCTCGGTCTGGCCG TERM 3000 3261679 - 3261707 + g 76 -8.1 -4.11394 | opp_overlap 3261670 GATCAATGCGCGTGA CGGCATCACCC GTGATCA GGGCGATGTCG TTTTGCGCGTACCAT TERM 3001 3262341 - 3262298 - H 84 -2.2 -5.42198 | gap 1, opp_overlap 3262329, overlap 3262299 GGCGAAAAAACAAAA CGGCCGCCAC-GGAGACGGAC CCG GACGGTATTCTGTGGCGACCC TGCCAACAGATTTTG TERM 3002 3262353 - 3262376 + H 73 -11.8 -3.15663 | opp_overlap 3262352 3262350 ACCCTGCCAACAGAT TTTGCGTCCG CCCT TGGACGCAAA TTCGTGGCGCTGCGT Nham_2967 3262560 - 3262775 + | hypothetical protein Nham_2968 3263246 - 3262791 - | ferric uptake regulator family protein TERM 3003 3263007 - 3263026 + g 70 -10 -3.55444 | gap 1 CTCGTATCTGGTCCG GCCATCGCC GAA GGCG-TGGC TTTCGAGAATCCCCG TERM 3004 3263188 - 3263168 - G 71 -11.1 -3.40299 | TCAGCACATTGAGAA TGACGCGGC GTG GCCCCGTCA GACGCAAACCCTTGT Nham_2969 3263449 - 3264891 + | carbohydrate-selective porin OprB Nham_2970 3266954 - 3265332 - | ABC transporter related TERM 3005 3265702 - 3265665 - G 70 -7.6 -4.07568 | overlap 3265671 GTCGTCGCCGGAAAA GCCAAAGCAGCCGGCG AGTGCG CGCAGGCTACCCTGCC CCGCGGTCGGAAACG TERM 3006 3265696 - 3265671 - G 71 -8.2 -3.92659 | overlap 3265665 GCCGGAAAAGCCAAA GCAGCCGGCG AGTGCG CGCAGGCTAC CCTGCCCCGCGGTCG TERM 3007 3270112 - 3270126 + H 71 -10 -3.53012 | TATGGTGGCAGTTAT CGTCGA TTG TCGACG TTTCACCAACGACGA TERM 3008 3270524 - 3270555 + H 71 -7.2 -4.14511 | overlap 3270543 TGCCGCAGTGGTCTC TGTGCCGGTCTTCC CCCC GGAAGTCCCGTGCA TTTTGCGATGGAGTT TERM 3009 3271668 - 3271689 + H 78 -6.5 -4.56597 | opp_overlap 3271649 3271647, overlap 3271669 CAACTGGTCTACCGG TGTGGTGCC GACC GGTACCGCG TTTTTCGGCGCGAGC Nham_2974 3271717 - 3274161 + | Outer membrane autotransporter barrel Nham_2975 3275480 - 3274485 - | hypothetical protein TERM 3010 3275432 - 3275464 + g 83 -7.5 -4.6468 | overlap 3275434 3275460 CGGCAGAAATCAGCG TGCAGAGCCCGGCAG TTA CTGCCGCGCCCAGAA TTTTCTGTCGTTTCA Nham_2976 3277000 - 3275510 - | sulfatase TERM 3011 3275873 - 3275840 - G 76 -6 -4.56597 | gap 1, overlap 3275841 3275842 CTTTCCTTCGAAAAA GGCGCGC-TGATCGA TGCCG TCGATCACGCGGTCC GTCGGCATCGCGGCA Nham_2977 3277950 - 3277009 - | secretion protein HlyD Nham_2978 3278192 - 3277947 - | hypothetical protein TERM 3012 3278059 - 3278033 - G 84 -10.9 -4.20696 | overlap 3278047 GCACGAATCCGAAAA TCAACGTGACC CAACC GGCCACGCTGA CCGCCTCGGCCCAGG Nham_2979 3279600 - 3278212 - | hypothetical protein Nham_2980 3281169 - 3279769 - | hypothetical protein Nham_2981 3282203 - 3281181 - | NapD-like protein TERM 3013 3282003 - 3282027 + g 70 -12.8 -2.94099 | GGCGATACGCTCGGC GGGCGGCACG AAATC CGTGCCACCC TGTGTCGTGACCCGC TERM 3014 3282247 - 3282272 + H 85 -16.9 -2.64243 | gap 1, opp_overlap 3282247 ACGAGGTTGAACCAA CCCGGCTCG-CC CAT GGACGAGCCGGG TCATGTGCGGTGTGG TERM 3015 3282272 - 3282247 - H 100 -18.3 -3.35073 | opp_overlap 3282247 ACGAGGTTGAACCAA CCCGGCTCGCC CATG GACGAGCCGGG TCATGTGCGGTGTGG TERM 3016 3284582 - 3284611 + G 72 -4.3 -4.57073 | gap 1, opp_overlap 3284577 GCAGCAGAAGCGGCG CG-CGATGTCGC TACCGGC GCGATGTCGACG TTTTTCGAAAACCTG TERM 3017 3284905 - 3284886 - g 71 -5.6 -4.25104 | gap 1, overlap 3284887 TTGCCGCGATCAAAA CTGCG-GCG CTC CGCACGCCG ATCGGTGGTACGCTT Nham_2983 3283907 - 3286513 + | hypothetical protein Nham_2985 3289073 - 3288048 - | hypothetical protein Nham_2986 3289627 - 3289103 - | hypothetical protein TERM 3018 3289259 - 3289220 - G 83 -15.6 -3.14931 | gap 1 CGCAGCGGTGACGAA GCCGA-CGGCGGCGCCGGC AGC GACCGCGCCACCGACCGGC CACCAGTATCGAGCG TERM 3019 3289824 - 3289807 - H 72 -4.7 -4.56775 | overlap 3289808 3289809 AGTTTGTGCCAAAAA TCGCCGC GCCC GCGGCAC ACTTAATAGAAAATA TERM 3020 3290764 - 3290783 + G 78 -12.1 -3.76379 | CGTTCCGCGTATCGC GGCGCGG GCTGCA CCGCGCC TTTCATGACGTGTTC Nham_2987 3290046 - 3291149 + | AraC family transcriptional regulator TERM 3021 3291449 - 3291426 - f 72 -9.4 -3.73775 | overlap 3291427 TCGACCTCCATCAAA GCCCCCCCCC GCTC GGCGGCGGGC GAAAACGTATGGCCC TERM 3022 3292657 - 3292638 - g 70 -7.2 -4.03078 | gap 1, opp_overlap 3292640 GGAGCACATCATAAA GATCGAACG TCT CGT-CGATC CTGTACCCGGCGAGC Nham_2989 3292321 - 3292917 + | plasmid pRiA4b ORF-3-like Nham_2990 3293748 - 3293056 - | two component transcriptional regulator TERM 3023 3293213 - 3293239 + g 74 -5.1 -4.56597 | gap 1 ACGGCTGCAAGGATT TGCC-GATGGGT CAAG ACCCGGCCGGCA TTTTTCGCAAGGAAC Nham_2991 3296429 - 3293745 - | osmosensitive K+ channel signal transduction histidine kinase TERM 3024 3295405 - 3295386 - G 76 -5.6 -4.57073 | overlap 3295390 CAGTTCGCTGAAAAA TCCACCGC GCGA GCGGCCGA CCACGATCTGGGTGA Nham_2992 3297056 - 3296439 - | potassium-transporting ATPase, C subunit Nham_2993 3299135 - 3297066 - | potassium-transporting ATPase subunit B Nham_2994 3300857 - 3299154 - | potassium-transporting ATPase subunit A TERM 3025 3301309 - 3301325 + r 71 -10.8 -3.61398 | GGGCGATGCCGCGCA CGCCGC GCTCG GCGGCG TTGTTGGACAGGCAG TERM 3026 3301840 - 3301824 - R 78 -11.5 -3.71284 | GCGCGAGTAATAGAA CACCGCC CCC GGCGGCG CCGGCCCGTTAAAAG TERM 3027 3301889 - 3301924 + r 84 -16.2 -2.66435 | gap 1, opp_overlap 3301878 3301877 3301917, overlap 3301884 3301887 AAACCCAGATCCGGC CGGTGTCGG-TCTTGCC CCT GGCCAGAACCGGCACCG TGGTGTCGTCGCCAT Nham_2996 3303123 - 3302776 - | IS66 Orf2 like Nham_2997 3303527 - 3303120 - | transposase IS3/IS911 TERM 3028 3303342 - 3303327 - GR 71 -10.4 -3.53012 | GGGCTCGTGGCGAAA GACGCG CCGC CGCGTC ATCAGCAATGAGCGC Nham_2998 3304293 - 3303496 - | transposase, IS4 Nham_3000 3305134 - 3305925 + | two component LuxR family transcriptional regulator TERM 3029 3306312 - 3306337 + F 76 -11.7 -3.36492 | GGGGAATTGCTGAGA GCGGCGCGGCG ATGT CGCGGCGCGGC TTCTCGCGTTGCCCA TERM 3030 3307111 - 3307096 - f 78 -9 -4.2349 | CTGCGATAGCCAAAA GCGTCA CGTG TGACGC CGTCACGGGTACGCC TERM 3031 3307603 - 3307632 + F 100 -13.5 -4.54727 | opp_overlap 3307603 3307601 TGAAAGCATGCAAGA CCCCGTCAGCGAC TTCG GTTGCAGGCGGGG TTTTCATTTGACGCC Nham_3003 3308072 - 3308347 + | hypothetical protein TERM 3032 3308491 - 3308516 + F 100 -5.3 -6.28967 | opp_overlap 3308491 TATTGCGTACAAAAC CCGCTGCCG ACTGATCC CCGCGGCGG TTTTTTTTATTTATA TERM 3033 3308583 - 3308624 + F 100 -18.1 -3.53012 | gap 1, opp_overlap 3308588, overlap 3308588 ATGACCGGCCCCCCC CAAGACCCGTCGGTGACGGG CGC CCCGG-ACCGGCGGGTTTTG TTTGCCCCGGGGAAC TERM 3034 3308619 - 3308588 - f 71 -12.2 -3.01712 | gap 1, opp_overlap 3308583 3308588 CGGCCCCCCCCAAGA CCCGTCGGTGACGGG CGC CCCGG-ACCGGCGGG TTTTGTTTGCCCCGG TERM 3035 3308588 - 3308619 + F 100 -14.4 -4.86731 | gap 1, opp_overlap 3308588, overlap 3308583 CGGCCCCCCCCAAGA CCCGTCGGTGACGGG CGC CCCGG-ACCGGCGGG TTTTGTTTGCCCCGG TERM 3036 3308715 - 3308728 + F 85 -9.5 -4.44667 | opp_overlap 3308712 3308714 3308709, overlap 3308714 AGTGGAACAGTACAC CCCGC GTCG GCGGG TTTGTTCTTGCGGCA TERM 3037 3309457 - 3309480 + G 88 -6.7 -5.24129 | opp_overlap 3309455 AGGAGCGCCACAAGC CCTGCTTGG GCCTAG CTGAGCAGG TTTTTTCTAGCGAGA Nham_3004 3309069 - 3309539 + | hypothetical protein Nham_3005 3310126 - 3309764 - | hypothetical protein TERM 3038 3310985 - 3310975 - H 83 -5.4 -4.93877 | CGCCACGAAACAAAA GGAA CCG TTCC CATGGAGAAGATTAT Nham_3007 3310987 - 3312018 + | transposase IS116/IS110/IS902 Nham_3008 3312453 - 3312917 + | transposase IS3/IS911 Nham_3011 3315327 - 3314254 - | hypothetical protein Nham_3012 3316520 - 3315324 - | HPr kinase Nham_3013 3316669 - 3316917 + | hypothetical protein Nham_3014 3317991 - 3317056 - | hypothetical protein Nham_3015 3319493 - 3318270 - | transposase, mutator type TERM 3039 3318561 - 3318615 + g 76 -9.1 -4.08216 | gap 2 GCGCCGCCAGCTCTG GCCGATGGCGG-GGTAG-CGCTGGCCC CAG GGGCCGGCCTCGAACGCCGCCAGCGCC TTTTCGGCAGCATCG Nham_3016 3319643 - 3319978 + | hypothetical protein TERM 3040 3321579 - 3321626 + T 75 -8.8 -4.04206 | gap 2, opp_overlap 3321589, overlap 3321579 3321582 3321584 3321586 CGGCCGCAACTCGTT G-GCT-AGATCATGATCCGATT GGATTG AATCGGATCATGATCTCATCTC TTTGTATGAGCATGA TERM 3041 3321579 - 3321624 + T 81 -12.8 -3.615 | opp_overlap 3321589, overlap 3321579 3321582 3321584 3321586 CGGCCGCAACTCGTT GGCTAGATCATGATCCGATT GGATTG AATCGGATCATGATCTCATC TCTTTGTATGAGCAT TERM 3042 3321582 - 3321622 + T 83 -13.7 -3.38294 | gap 1, opp_overlap 3321589, overlap 3321579 3321579 3321584 3321586 CCGCAACTCGTTGGC T-AGATCATGATCCGATT GGATTG AATCGGATCATGATCTCA TCTCTTTGTATGAGC TERM 3043 3321584 - 3321619 + T 89 -17.9 -2.8459 | opp_overlap 3321589, overlap 3321582 3321579 3321579 3321586 GCAACTCGTTGGCTA GATCATGATCCGATT GGATTG AATCGGATCATGATC TCATCTCTTTGTATG TERM 3044 3321586 - 3321617 + T 82 -14.7 -2.95943 | opp_overlap 3321589, overlap 3321584 3321582 3321579 3321579 AACTCGTTGGCTAGA TCATGATCCGATT GGATTG AATCGGATCATGA TCTCATCTCTTTGTA TERM 3045 3323108 - 3323051 - T 73 -12 -3.02511 | gap 3, opp_overlap 3323062 TGGAGGTGTTCAAGA TCGACGACGTAGCCGCCGCCGTGCGCGAT GCC ATCGCGCGCGGCC-CGGC--CGGCTTCGA TGCCGTGAAGCATCT TERM 3046 3323062 - 3323103 + T 88 -16 -3.06796 | gap 3, opp_overlap 3323051 AAGATCGACGACGTA GCC-GCC-G-CCGTGCGCGAT GCC ATCGCGCGCGGCCCGGCCGGC TTCGATGCCGTGAAG TERM 3047 3324100 - 3324044 - T 100 -26 -3.95584 | gap 1, opp_overlap 3324056 3324060 3324091, overlap 3324056 CCCTCAGGAATGAAA CGCGGCAAGCAAGCAAGCAGGCCCCCG ATAT CGGGGGCCTGCTTGCTTGCAT-CAGTG CTGCACTTTTACTCC TERM 3048 3324056 - 3324089 + T 100 -28.3 -3.08464 | opp_overlap 3324044 3324056, overlap 3324060 AAACGCGGCAAGCAA GCAAGCAGGCCCCCG ATAT CGGGGGCCTGCTTGC TTGCATCAGTGCTGC TERM 3049 3324089 - 3324056 - T 100 -28.3 -3.35088 | opp_overlap 3324056 3324060, overlap 3324044 AAACGCGGCAAGCAA GCAAGCAGGCCCCCG ATAT CGGGGGCCTGCTTGC TTGCATCAGTGCTGC TERM 3050 3324060 - 3324085 + T 100 -21.9 -3.3782 | opp_overlap 3324056 3324044, overlap 3324056 GCGGCAAGCAAGCAA GCAGGCCCCCG ATAT CGGGGGCCTGC TTGCTTGCATCAGTG TERM 3051 3324193 - 3324167 - T 75 -10 -3.75024 | CGGCATGAGGAACAA GCGCCCGGCGGA TAC TTCGTCGGACGC GACGAACTGCGAGTG Nham_3021 3325187 - 3324813 - | hypothetical protein Nham_3022 3326394 - 3325345 - | UDP-glucose 4-epimerase TERM 3052 3325553 - 3325539 - G 76 -7.8 -4.25848 | AATCCGCGATTAAAA CGGATG GAT CACCCG GACGCCTCGGGTAAT Nham_3023 3326955 - 3326623 - | hypothetical protein Nham_3024 3327166 - 3328236 + | metallophosphoesterase TERM 3053 3328294 - 3328311 + T 74 -2.5 -4.88407 | opp_overlap 3328267 3328276, overlap 3328296 CGGGATGCGGCCGCG ACGCCGG CGCG CCGGCTA TTTTTCCTTGAATGC TERM 3054 3328296 - 3328309 + T 78 -9.5 -4.06004 | opp_overlap 3328267 3328276, overlap 3328294 GGATGCGGCCGCGAC GCCGG CGCG CCGGC TATTTTTCCTTGAAT Nham_3025 3329622 - 3328309 - | Type I secretion membrane fusion protein, HlyD TERM 3055 3329050 - 3329061 + g 77 -4.4 -4.91473 | GAGTTCCTGCTGGAT GAAG TCGA CTTC TTTCTTTTTCGCTTC TERM 3056 3329211 - 3329178 - G 72 -7.3 -4.11216 | gap 1 GGCGCAGGTCGAAAA GACTGCGCTC-CGCGG CGA CAGCGCGAGCGGCGTC TGAGGCCGGATCGTG Nham_3026 3331625 - 3329622 - | Type I secretion system ATPase, PrtD TERM 3057 3331449 - 3331438 - G 78 -3.6 -5.04325 | opp_overlap 3331445, overlap 3331441 CGGAAACGAGAAAAA GCAC CGCC GCGC GCAACCGCATCAAAC TERM 3058 3331573 - 3331532 - G 71 -10.9 -3.53012 | gap 1, opp_overlap 3331545 3331554 CGGCCGCGGCTGAAA CCGCCTGAGATGATCCGGCC GCA GGTCCGATCATCTGA-GCGG GCCGATTCCTATTGG TERM 3059 3331655 - 3331691 + r 100 -18.8 -3.94877 | opp_overlap 3331665 3331667, overlap 3331658 GATCCTAAGATTCAG CTGCACCCAAGAGCCG CCTAA CGGCTCTTGGGTGTCG TTCTTGTTACGGACT TERM 3060 3331658 - 3331688 + r 100 -21.3 -3.03309 | opp_overlap 3331665 3331667, overlap 3331655 CCTAAGATTCAGCTG CACCCAAGAGCCG CCTAA CGGCTCTTGGGTG TCGTTCTTGTTACGG Nham_3027 3335570 - 3331734 - | hypothetical protein TERM 3061 3333072 - 3333084 + g 71 -4.7 -4.46615 | opp_overlap 3333054 3333069 GTCGATCATAATCGC CGACG TCC CGCCG TTTTGATTGATGATC TERM 3062 3335794 - 3335777 - H 100 -9.9 -4.94811 | opp_overlap 3335780 CGAAAAACAAACAAA CAACGGA TTAA TCCGTTG AGTGACGCACCATTT TERM 3063 3336315 - 3336326 + G 71 -5.8 -4.35524 | overlap 3336323 GGTATCGCGGCGACA CGGA CATT TCCG TTTTGGATTTGGCCC Nham_3028 3336011 - 3336793 + | methyltransferase FkbM Nham_3029 3337637 - 3336831 - | hypothetical protein TERM 3064 3337517 - 3337507 - G 78 -6.8 -4.66537 | CGTCCGAACAGAAAA CGCA TGG TGCG CAGGCCGCTCCGGAG Nham_3030 3338982 - 3337678 - | hypothetical protein TERM 3065 3338020 - 3338008 - G 74 -10.5 -3.78067 | AAGATCGAACGCAAA GCCGG TCA CCGGC GCCTGAGCGATTTTG Nham_3031 3340249 - 3339002 - | hypothetical protein Nham_3032 3342380 - 3340236 - | glycosyl transferase family protein TERM 3066 3341367 - 3341381 + g 77 -12.8 -3.63694 | CGACACGACTTTTTT CCGGCG CAA CGCCGG TTCTTCGACATACGT TERM 3067 3341724 - 3341706 - G 77 -4.4 -4.83169 | overlap 3341689 3341709 ATCGCTGTACAAAAA CAGCGCCG CGC CCGCGATG AAATAAACGAAAAGG Nham_3033 3344005 - 3342491 - | methyltransferase type 11 Nham_3034 3344264 - 3345586 + | glycosyl transferase, group 1 Nham_3035 3346789 - 3345650 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 3068 3346739 - 3346729 - G 73 -6.8 -4.3898 | ACCAGCCCGACAAAA CCGT CCG ACGG GCAGCTTCGCCTTCT Nham_3036 3347790 - 3346786 - | NAD-dependent epimerase/dehydratase TERM 3069 3347192 - 3347160 - G 78 -4.8 -4.77036 | gap 2, opp_overlap 3347175 GGCCATCACCAAAAA TGG-TCGGC-GGCAGC CCG GCTTCCAGCCGTTCCA TCCATCGGATGAGCA Nham_3037 3348958 - 3347855 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 3070 3348429 - 3348419 - G 73 -6.8 -4.36914 | CTTGGCCGGATAAAA GCTG AAA CAGC CGAAATCACCGATCG Nham_3038 3349653 - 3349144 - | hexapaptide repeat-containing transferase Nham_3039 3351160 - 3349712 - | polysaccharide biosynthesis protein TERM 3071 3349851 - 3349840 - G 75 -3.6 -4.82901 | overlap 3349821 GGCCGGTCAGAAAAA GGCC AAGC AGCC ATCCCGCACCCGCCA Nham_3040 3352035 - 3351268 - | acetyltransferase Nham_3041 3353084 - 3352032 - | oxidoreductase-like TERM 3072 3352996 - 3352940 - G 91 -15.7 -3.86346 | opp_overlap 3352969, overlap 3352941 3352973 CGACCGCGGGATAAA GGCGCTTGGTCGCCGCGAGCCTCACTG GAT CAAGGTCGCTCACGGCAACCACGCGCG CGACCTGGCTGTTCA TERM 3073 3352995 - 3352941 - G 91 -19.2 -2.91593 | opp_overlap 3352969, overlap 3352940 3352973 GACCGCGGGATAAAG GCGCTTGGTCGCCGCGAGCCTCACTG GAT CAAGGTCGCTCACGGCAACCACGCGC GCGACCTGGCTGTTC Nham_3042 3354397 - 3353138 - | UDP-glucose/GDP-mannose dehydrogenase TERM 3074 3353193 - 3353217 + g 73 -6.3 -4.30416 | opp_overlap 3353168, overlap 3353187 TCGATCACGTCGAGA TGGCGCCGCTC GGC GAGCGGAATCA TTTTGAATTCGTCGT TERM 3075 3353838 - 3353828 - G 76 -8.2 -4.11773 | overlap 3353829 AAACATCTTGTAAAA GCGC TGA GCGC GCCTTGCGCACAACG Nham_3043 3355508 - 3354390 - | UDP-N-acetylglucosamine 2-epimerase Nham_3044 3356358 - 3355510 - | WecB/TagA/CpsF family glycosyl transferase Nham_3045 3356517 - 3357434 + | glycosyl transferase family protein TERM 3076 3357528 - 3357471 - T 87 -18 -2.69246 | overlap 3357463 3357483 TATAAATCGAGACTA CGAGTTGAGACACGTATCGCGC-GTTGC GTCG GCAAATGCGCGAT-CGTGCGTCAACTCG AGCAGATCGGACCGC Nham_3046 3358667 - 3357468 - | hypothetical protein Nham_3047 3360134 - 3358701 - | Type I secretion membrane fusion protein, HlyD TERM 3077 3358890 - 3358906 + g 70 -12.3 -3.14878 | overlap 3358888 ATATGCGGGGATCGC GCGATGG GAC CCATCGC TCTTGGCTTCGGCCC Nham_3048 3362353 - 3360131 - | ABC transporter related TERM 3078 3360300 - 3360320 + g 73 -11.1 -3.54741 | ATGATGACCGTGCGC CCTTCCGCG ATG CGCCGAAGG TTTCGACGAATGATC Nham_3049 3362669 - 3362331 - | hypothetical protein Nham_3050 3363510 - 3362719 - | methyltransferase type 11 Nham_3051 3368889 - 3363655 - | hypothetical protein TERM 3079 3364404 - 3364420 + g 78 -6.6 -4.56597 | opp_overlap 3364411 3364412 GATTGTTCTCGGTGA CGACAA AGCCG TTGTCG TTTTTGGCAACGGGC Nham_3052 3369953 - 3369057 - | glucose-1-phosphate thymidylyltransferase Nham_3053 3370873 - 3369950 - | dTDP-4-dehydrorhamnose reductase Nham_3054 3371918 - 3370866 - | dTDP-glucose 4,6-dehydratase Nham_3055 3372559 - 3371936 - | dTDP-4-dehydrorhamnose 3,5-epimerase Nham_3056 3372897 - 3375215 + | protein-tyrosine kinase TERM 3080 3375710 - 3375730 + G 73 -12.5 -3.15544 | opp_overlap 3375706, overlap 3375712 AGTGTGACAATTTTT GAGGCCGCC GCG GGCGGCCTG TTCATCCCCGTCGAA TERM 3081 3375712 - 3375728 + G 83 -15.1 -3.14051 | opp_overlap 3375706, overlap 3375710 TGTGACAATTTTTGA GGCCGCC GCG GGCGGCC TGTTCATCCCCGTCG Nham_3057 3375341 - 3376663 + | polysaccharide export protein TERM 3082 3376883 - 3376863 - f 88 -11.1 -4.18494 | overlap 3376846 CATTTGGACGTAAAA GGCCGATCG GGG CGATTGGCC TCGGTGGCAGAGGAT Nham_3058 3377413 - 3378624 + | transposase IS116/IS110/IS902 Nham_3060 3380381 - 3381532 + | transposase IS116/IS110/IS902 TERM 3083 3381577 - 3381617 + T 72 -9.7 -3.71848 | AATTAGTTTATGTCA TCTCCCAAGACTGGTCGGT CCT ACTGGTCGGTCCTGGCAGA TTCTTGGTAGACGAA Nham_3061 3382229 - 3381825 - | hypothetical protein Nham_3062 3382729 - 3382184 - | hypothetical protein Nham_3064 3383826 - 3385298 + | sugar transferase Nham_3065 3385602 - 3386000 + | hypothetical protein TERM 3084 3386286 - 3386262 - T 85 -10 -4.37198 | opp_overlap 3386264, overlap 3386250 AAGCGAAACCGAAAA GACCAGCGTC CTTAC GACGCCGATC TCTACAAGGAGCGCA Nham_3068 3386812 - 3386444 - | histone-like nucleoid-structuring protein H-NS TERM 3085 3386894 - 3386907 + H 90 -4.5 -5.40072 | opp_overlap 3386894 TGGGCCGCATCAAAT CTGGA CACC TCCGG TTTTTTTAAGCCGGA Nham_3069 3387740 - 3388132 + | histone-like nucleoid-structuring protein H-NS TERM 3086 3388476 - 3388455 - f 81 -3.5 -5.27335 | GTGTTTAAACAAAAA GGCGAGTTG TAGT CTGCCCGCC GCCACGACACAGTCG TERM 3087 3388792 - 3388807 + F 74 -8.2 -4.17089 | opp_overlap 3388782 TCATAGCCGCGCAGT CCGCCG GCCT CGGTGG TTTTGACGCTTTGGC Nham_3072 3390042 - 3390476 + | hypothetical protein Nham_3073 3390473 - 3390850 + | hypothetical protein TERM 3088 3391225 - 3391252 + T 100 -10.4 -5.24129 | CCCGTCTACCCCTCA CCCGCCAGTGCG TCCC CTCGCCGGCGGG TTTTTTATCGGGCCA Nham_3074 3391861 - 3391328 - | hypothetical protein TERM 3089 3391681 - 3391666 - G 91 -9 -4.48987 | CTGCGATAACCAAAA GCGTCA CATG TGACGC CGTCACGGGTACGCC TERM 3090 3391895 - 3391873 - H 72 -9 -3.91084 | opp_overlap 3391874, overlap 3391874 TCATCCTGAATTAAA GGGCGCGGAA AGA TGCCGCGCCT TTTGACCTTTCACAA TERM 3091 3391894 - 3391874 - H 74 -12.5 -2.94329 | opp_overlap 3391874, overlap 3391873 CATCCTGAATTAAAG GGCGCGGAA AGA TGCCGCGCC TTTTGACCTTTCACA TERM 3092 3391874 - 3391894 + H 93 -12.5 -4.24002 | opp_overlap 3391874 3391873 CATCCTGAATTAAAG GGCGCGGAA AGA TGCCGCGCC TTTTGACCTTTCACA Nham_3075 3392026 - 3392838 + | transposase, IS4 Nham_3076 3394297 - 3392861 - | transposase TERM 3093 3394436 - 3394419 - H 100 -10.5 -5.77571 | opp_overlap 3394419 AGGAAAAAATAAAAA GGCACGG TGGC CCGCGCC TTTGCCTGATCGATG TERM 3094 3395266 - 3395288 + G 74 -5.4 -4.60924 | overlap 3395281 ACTGTGGCCATCGGA CATGTCCGCC ATC GGCCGTCGTG TTTTTCCGCGGTTTA Nham_3077 3394775 - 3395596 + | hypothetical protein Nham_3078 3396113 - 3395763 - | hypothetical protein Nham_3079 3397123 - 3396110 - | transposase IS116/IS110/IS902 TERM 3095 3396707 - 3396684 - G 84 -11 -4.13767 | overlap 3396700 3396702 TTTGCCATGGCAAAA CCGCGGTC GAGCAGAA GACCGCGG ATCTGGCTGACCACG Nham_3081 3398531 - 3398731 + | transposase IS3/IS911 TERM 3096 3398802 - 3398778 - f 78 -3.6 -5.02074 | gap 1 CGATCTGTCAAAAAA GCTTCCT-AGC TCGC GCTGATGAAGC AAGGTTGTCGCCTAC Nham_3082 3398796 - 3399176 + | hypothetical protein Nham_3083 3400568 - 3399537 - | transposase IS116/IS110/IS902 TERM 3097 3400911 - 3400885 - H 95 -6.6 -5.55698 | gap 1, opp_overlap 3400897 3400898, overlap 3400887 GACAATCGAAAAAAA GCCGATCG-GA GTGGGG TCACGACCGGC GCCGATCGTGACCGG TERM 3098 3402352 - 3402375 + G 84 -11 -4.13767 | overlap 3402336 3402349 CGTGGTCAGCCAGAT CCGCGGTC TTCTGCTC GACCGCGG TTTTGCCATGGCAAA Nham_3085 3401936 - 3402949 + | transposase IS116/IS110/IS902 Nham_3087 3412001 - 3404778 - | Outer membrane autotransporter barrel TERM 3099 3410211 - 3410198 - G 76 -5.9 -4.56597 | opp_overlap 3410177, overlap 3410199 TCGCCGGCGCAAAAA CGCCG CCGC CGGCA TTGATCGTCACCGCG TERM 3100 3410326 - 3410293 - G 75 -12.4 -3.57144 | gap 1, opp_overlap 3410321 3410322 TCGCCCAGCGTCAAA CCACCGGTGGTCGCG CCCAT CGCG-CCATCGGCGG CGACGCTCAGCGTGC TERM 3101 3412683 - 3412702 + G 70 -12.2 -3.16039 | overlap 3412690 AGATCCGAACTGCCC TTGGCGAC GAGC GTCGCCAA TTGGTCAGGCTCGTT Nham_3088 3412454 - 3414178 + | transcriptional regulator, CadC Nham_3089 3414233 - 3414478 + | hypothetical protein Nham_3090 3414697 - 3415302 + | nuclease (SNase-like) Nham_3091 3416572 - 3415619 - | ribose-phosphate pyrophosphokinase Nham_3092 3417337 - 3416738 - | hypothetical protein Nham_3093 3418239 - 3417469 - | hypothetical protein TERM 3102 3418203 - 3418189 - G 76 -5.6 -4.56597 | overlap 3418191 CTCGCGGGTGAAAAA GGCGTG CCG CAGGCC GGGAACGGCCGAGAG Nham_3094 3419363 - 3418236 - | hypothetical protein Nham_3095 3420231 - 3419356 - | prolipoprotein diacylglyceryl transferase Nham_3096 3420442 - 3420699 + | hypothetical protein TERM 3103 3420724 - 3420751 + T 75 -12 -3.21395 | gap 1, overlap 3420722 TTTTCAGGCCCGCTT CAGCGAGCCGCGA TGT TCGCGG-TCGCGG TATTCTCCAGCGAAT Nham_3097 3420881 - 3420723 - | hypothetical protein Nham_3098 3421607 - 3421125 - | MaoC-like dehydratase Nham_3099 3422072 - 3421611 - | MaoC-like dehydratase Nham_3100 3422231 - 3422524 + | hypothetical protein TERM 3104 3422745 - 3422759 + T 70 -4.2 -4.63928 | overlap 3422723 3422721 CCGTTCAGATTGAAC CGGATC AGA GGTCTG TTTTTCGCATGATCT Nham_3101 3423908 - 3422811 - | translation-associated GTPase TERM 3105 3422940 - 3422960 + g 76 -6.1 -4.60041 | ATCGGCGTAAGCGAT GGTTTCGGC GCG GATGAAACC TTTTTCAAAGTCGGT TERM 3106 3422982 - 3423003 + g 73 -12.9 -3.14344 | opp_overlap 3422970 3422984 AAAGTCGGTGTGAAT GACGCCGGC CGCG GCCGGCGCC TTGGTGCCGCGGGTG TERM 3107 3423001 - 3422984 - G 72 -14.1 -2.71011 | opp_overlap 3422982, overlap 3422970 AGTCGGTGTGAATGA CGCCGGC CGCG GCCGGCG CCTTGGTGCCGCGGG TERM 3108 3423161 - 3423142 - G 74 -5.7 -4.42653 | gap 1, overlap 3423145 3423146 AGCGTATCGAGAAAA TCAGCGCG CTCCT CGCGC-GA CAGCGTCGCGATCTC Nham_3102 3424675 - 3424061 - | peptidyl-tRNA hydrolase TERM 3109 3424553 - 3424590 + g 87 -19.2 -2.78384 | gap 1, opp_overlap 3424553 3424554 GGCCTCGCCCTGAAA GCG-GCGGCGCCACGGT GCGAA ACCGTGGCGCCGCGCGA TCTCGTCCACGACCA TERM 3110 3424588 - 3424553 - G 100 -22.7 -3.53012 | gap 1, opp_overlap 3424553, overlap 3424554 GGCCTCGCCCTGAAA GCGGCGGCGCCACGGT GCGAA ACCGTGGCGCCGC-GC GATCTCGTCCACGAC TERM 3111 3424589 - 3424554 - G 100 -22.7 -2.71712 | gap 1, opp_overlap 3424553, overlap 3424553 GCCTCGCCCTGAAAG CG-GCGGCGCCACGGT GCGAA ACCGTGGCGCCGCGCG ATCTCGTCCACGACC Nham_3103 3425392 - 3424691 - | 50S ribosomal protein L25/general stress protein Ctc TERM 3112 3424787 - 3424811 + g 74 -12.7 -3.28745 | overlap 3424763 GGGAGCCGCGGTGCC GGCCGCAGCCG CAG CGGCAGCCGCC TTGACTTCTTCCGCG TERM 3113 3425439 - 3425424 - H 86 -11.8 -3.99805 | overlap 3425418 TTTCAAAAAGTTAAA GGCCGC AATC GCGGCC CGTTGCACGTCACCG Nham_3104 3425631 - 3425978 + | hypothetical protein Nham_3105 3426076 - 3426615 + | hypothetical protein TERM 3114 3426712 - 3426732 + F 74 -11.2 -3.60818 | opp_overlap 3426721, overlap 3426707 3426728 ATCGCCGGGGCATCT GTGCGAAG ATGTG CTTCGCAC TTTAGAGCGTTTTCG TERM 3115 3427380 - 3427328 - g 83 -14.8 -3.53012 | gap 1, overlap 3427339 GCGGTCGCCGCCAAA GGCGTGAACGAGCAGCAGCGCGCCA CTGC CGACGCGCTGCTGCGCGC-CACGGG GGCGGTGGAATGGAT TERM 3116 3427370 - 3427339 - g 90 -20.2 -2.72855 | overlap 3427328 CAAAGGCGTGAACGA GCAGCAGCGCGCCA CTGC CGACGCGCTGCTGC GCGCCACGGGGGCGG TERM 3117 3427537 - 3427526 - g 71 -5.8 -4.37658 | AACCTTGCGACAAAA CTCG CCCG CGAG ACCGTCGCCGGTTCA Nham_3106 3426893 - 3427729 + | pyrroline-5-carboxylate reductase Nham_3107 3428933 - 3427833 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 3118 3427948 - 3427926 - G 71 -11.2 -3.49878 | overlap 3427919 GAACGAAAGCGACAA CGGCAGCACG CGG CGCACCGCCG GCTGGCCGTGATGCG TERM 3119 3428582 - 3428628 + g 85 -14.3 -3.57561 | TTTGGGCGAGCGCAC GGAC-CGCCGGCGCGGCCTGTGC CGT GC-CTCGCCGCGCCGGTGCGACC TTTGGGGCCTTCGCG Nham_3108 3429934 - 3428954 - | transketolase, central region Nham_3109 3431025 - 3429934 - | pyruvate dehydrogenase (lipoamide) TERM 3120 3430263 - 3430321 + g 72 -13.7 -2.73364 | gap 2 CGATCAGGCGCGGAC CGCGG-C-CGTCGCGCGCGGCCGCGATGG CCT CAGTCGCGGCAGCGTGCATCGCGACTGCG TCGTTGCCGTCCACC Nham_3110 3431235 - 3432746 + | aldehyde dehydrogenase Nham_3111 3433984 - 3432767 - | ornithine aminotransferase Nham_3112 3434268 - 3434738 + | YbaK/prolyl-tRNA synthetase associated region Nham_3113 3435214 - 3436323 + | transposase, IS4 Nham_3114 3437237 - 3436440 - | hypothetical protein TERM 3121 3437509 - 3437499 - H 71 -6.8 -4.15044 | opp_overlap 3437498 CCTGCCTTGAATAAA CCTG CTT CAGG ATTAGCTTAGTTGTA Nham_3115 3437578 - 3437826 + | hypothetical protein Nham_3116 3439052 - 3437907 - | hypothetical protein Nham_3118 3441386 - 3439362 - | 4Fe-4S ferredoxin, iron-sulfur binding TERM 3122 3441065 - 3441085 + g 72 -3.8 -4.56775 | overlap 3441061 GCGCAGGCTCAGTCG CGAGCGCG AGCAG CGCGGCCG TTTTTGGACCCGCCT Nham_3119 3441485 - 3442240 + | hypothetical protein Nham_3120 3442237 - 3442776 + | hypothetical protein Nham_3121 3442773 - 3443780 + | hypothetical protein Nham_3122 3443777 - 3444295 + | molybdopterin-guanine dinucleotide biosynthesis protein A Nham_3123 3444292 - 3444990 + | hypothetical protein TERM 3123 3445767 - 3445782 + G 76 -8.2 -4.16284 | opp_overlap 3445765 TTGAGAAACATATCG CGCCCT GGAT GGGGCG TTTGTTCGCCGATAT Nham_3124 3445112 - 3445894 + | cytoplasmic chaperone TorD Nham_3125 3445929 - 3446147 + | twin-arginine translocation pathway signal TERM 3124 3447911 - 3447892 - g 72 -4.2 -4.56597 | TCTTGTCGCCAAAAA GCTCGGCT TTGC AGACAAGC TGTTCAAGAACATCA TERM 3125 3448061 - 3448042 - g 75 -4.2 -4.8048 | GGCGCACATGAAAAA CCAGAACA AGTT CGATCTGG TCACCATGCGCGCGC Nham_3126 3446159 - 3449110 + | twin-arginine translocation pathway signal Nham_3127 3449123 - 3449719 + | 4Fe-4S ferredoxin, iron-sulfur binding Nham_3128 3449777 - 3450787 + | formate dehydrogenase, gamma subunit Nham_3129 3451229 - 3450987 - | SirA-like Nham_3130 3452528 - 3451272 - | MoeA-likedomain-containing protein TERM 3126 3451316 - 3451299 - G 71 -5.5 -4.36596 | gap 1, overlap 3451300 3451301 GGCATAAGGAAGAAA CCCGACGC CCT GC-CCGGG CTCGACCCGACTGAT TERM 3127 3451437 - 3451473 + g 86 -5 -5.20333 | gap 1, overlap 3451440 GCCATCGTCGGCCTT GCGCAAGCTGGCGCGGA CATA TTCGCGTCGGCCGG-GC TTTTTCTTGTAGGTA TERM 3128 3451620 - 3451584 - G 76 -13.7 -3.19157 | overlap 3451575 3451617 GACGAAGGTGACGAA GCTCGCGACCGGATTGC CCG GCAATCCGATCAAGGGC GTGCCGCCGATGATC Nham_3131 3453137 - 3452538 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 3129 3452663 - 3452682 + g 75 -3.4 -4.91109 | overlap 3452662 TTTCAACCGCAATGT CAGCGGCG ATGC CGACGATG TTTTTGTCGTCAGGA Nham_3132 3453244 - 3454134 + | formate dehydrogenase family accessory protein FdhD mobA 3454124 - 3454753 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 3130 3454857 - 3454814 - T 70 -12 -2.74012 | gap 1, opp_overlap 3454818, overlap 3454818 CGAGGAGCGGAACCA CGAAGCAATCCAGATGCTT TCAAAAC AAGAA-CTGGATTGCTTCG CTCAGCGCAAAATTG Nham_3134 3456909 - 3454948 - | MoeA-likedomain-containing protein Nham_3135 3458020 - 3456911 - | molybdopterin binding domain-containing protein TERM 3131 3458161 - 3458209 + r 72 -5.7 -4.54727 | gap 4, overlap 3458159 3458164 3458165 GCACACTTGATGCGT TCGCTAGAGCCTTTTCGCTTCTGAT GGA ATCAGAAGCG--A-GGCTCTA-TGA TTTTGATTTGACGCG Nham_3136 3459789 - 3458356 - | periplasmic sensor signal transduction histidine kinase TERM 3132 3459111 - 3459086 - G 70 -7.6 -4.07568 | opp_overlap 3459105 CGGCCCTTGCCAAAA CTGTCGGC-GGC ATCC GCCAGCCG-CAG GATCGGCTTGATCTG Nham_3137 3460517 - 3459789 - | two component transcriptional regulator TERM 3133 3460421 - 3460405 - G 74 -5.8 -4.46212 | overlap 3460407 TCCCCCACCAGAAAA CGCGAC AGCAG ATCGCG GATACGCCTGTCGTC Nham_3138 3461062 - 3460514 - | MarR family transcriptional regulator TERM 3134 3460751 - 3460717 - G 82 -10.7 -4.07568 | gap 1, opp_overlap 3460732, overlap 3460720 TCGCGGTGGCGAAAA GAAGG-CGCTGACGCC GGTC GGCGTCGCCGGCCTTC TGCACGATATAGCCC TERM 3135 3460731 - 3460720 - G 72 -7.2 -4.17048 | overlap 3460717 CGGTGGCGAAAAGAA GGCG CTGA CGCC GGTCGGCGTCGCCGG TERM 3136 3461779 - 3461813 + G 72 -7.6 -4.19817 | opp_overlap 3461768 3461769 ACAATCCGGCGAAGG GCTGGCACGGCGCGCG CGT CGAATCCCGCGCCAGC TTTTCGCTCGATCCC Nham_3139 3461610 - 3462722 + | branched-chain amino acid aminotransferase Nham_3140 3463078 - 3464187 + | transposase, IS4 Nham_3141 3465722 - 3464304 - | MATE efflux family protein TERM 3137 3465781 - 3465802 + r 90 -11.5 -4.2828 | opp_overlap 3465781 ATCAGGACGACGAAA CCTCCGACG GTAT CGCCGGAGG TTTTCGTGCGTCGCC TERM 3138 3465802 - 3465781 - R 93 -13.7 -3.80841 | opp_overlap 3465781 ATCAGGACGACGAAA CCTCCGACG GTAT CGCCGGAGG TTTTCGTGCGTCGCC Nham_3142 3466865 - 3465834 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 3139 3466769 - 3466817 + g 93 -8 -5.09225 | gap 1 CGGGAGCCGGGGTTC CGGCGGCGGAGG-GGTTTGCAGT TTTG GCTACAGCCCGCGTCGGCCGCCG TTTTTTGGCTGAGCT Nham_3143 3467347 - 3466880 - | molybdopterin biosynthesis MoaE Nham_3144 3467621 - 3467370 - | molybdopterin converting factor, subunit 1 Nham_3145 3468235 - 3467618 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase uvrC 3470451 - 3468379 - | excinuclease ABC subunit C TERM 3140 3469715 - 3469694 - G 72 -12.3 -3.2963 | overlap 3469704 ACCAGCGCCGTATAA CCGGGGAAA TCGA TCTCCCCGG TGCAGGGGCCCGCGC TERM 3141 3470519 - 3470474 - H 83 -11.8 -3.79668 | gap 2, opp_overlap 3470483 3470484 AGTTAAGCGATGAAA CCGGC-CGATGC-CAGCGGCGG TGCG CCGCCCCCGCGCAACGCACCGG GCTGGTTCCATGGCA TERM 3142 3470549 - 3470577 + H 76 -3.1 -5.00616 | gap 1, opp_overlap 3470541 3470537, overlap 3470549 3470550 AAAGGCAGCGTCACC G-GTTCCCGGCG CTGCCA TGCCGGTAACAC TTTTTTAAGAACAAC Nham_3147 3470743 - 3471363 + | putative outer-membrane immunogenic protein precursor TERM 3143 3471414 - 3471435 + T 100 -17.3 -4.72272 | CTGATCACGCTGCAA TCCCGGCCG TTCA CGGCCGGGA TTTTTCGTCACGCAA Nham_3148 3471739 - 3471524 - | cold-shock DNA-binding domain-containing protein Nham_3149 3472853 - 3471996 - | hypothetical protein TERM 3144 3472580 - 3472528 - G 78 -11.8 -3.72576 | gap 1, overlap 3472529 TGCGGCCGCAGCAAA GCGC-GCGCGATCAGCGGCGATCCC GGAT AGGACCGCAGCAGGCCGCGCTGCGG ATTGAAGGCCCTGAC TERM 3145 3472579 - 3472529 - G 79 -15.3 -2.83403 | gap 1, overlap 3472528 GCGGCCGCAGCAAAG CGC-GCGCGATCAGCGGCGATCCC GGAT AGGACCGCAGCAGGCCGCGCTGCG GATTGAAGGCCCTGA Nham_3150 3473709 - 3473017 - | ribonuclease T2 Nham_3151 3474280 - 3473825 - | hypothetical protein TERM 3146 3474246 - 3474214 - G 91 -19.1 -3.02144 | opp_overlap 3474211 3474192, overlap 3474180 GCAGGGCGGCGAACA GCCCCAACGCTGCGC CGA GCGCCGCGCTGGAGC CGGCTTTCTTCAAGG Nham_3152 3474453 - 3474737 + | hypothetical protein Nham_3153 3474851 - 3475378 + | hypothetical protein hisS 3477169 - 3475589 - | histidyl-tRNA synthetase TERM 3147 3477142 - 3477154 + g 84 -2.6 -5.24531 | overlap 3477128 GGGCGCGGAGTTTTT GCGG CTTCT TCGC TTTTTTGTCGGACAT TERM 3148 3478749 - 3478722 - R 85 -15.6 -3.12668 | gap 1, opp_overlap 3478746 3478747, overlap 3478738 CATTGGCAGAGCCAA CCGCAGGCGTCAC GAA GCG-CGCCTGCGG CGCTAGCGCGGCGTT Nham_3156 3479500 - 3479057 - | TadE-like TERM 3149 3479456 - 3479411 - G 70 -11.8 -3.16935 | gap 1, overlap 3479399 3479413 AAACAGCGGCAGCAA CATCGCGAACT-CGACCGCGG ATGCG CCGCGGCCGCAGCGCGCAAAG AGCCGAAGATCAAGA TERM 3150 3479454 - 3479413 - G 73 -13 -3.14229 | gap 1, overlap 3479399 3479411 ACAGCGGCAGCAACA TCGCGAACT-CGACCGCGG ATGCG CCGCGGCCGCAGCGCGCAA AGAGCCGAAGATCAA TERM 3151 3479569 - 3479556 - H 73 -3.1 -4.77157 | gap 1 CCAATGCACGAAAAA CGGCAG TAT CT-CCG GCTTGCACTTGCGGA Nham_3157 3479792 - 3481129 + | beta alanine--pyruvate transaminase TERM 3152 3481514 - 3481488 - g 90 -18 -3.06796 | CGCCAGGTCACCGAA TTCGGACGCCGC CTC GCGGCGGCCGAA AGCAAGATCGCCGCG TERM 3153 3481726 - 3481709 - g 78 -9.8 -4.03234 | opp_overlap 3481724 TGTCCCGGACACAAA GCCGGC TCACGC GCCGGC ACGGGCCGCACCCGC Nham_3158 3481242 - 3482693 + | diguanylate phosphodiesterase Nham_3159 3482709 - 3483563 + | HAD family hydrolase Nham_3160 3484016 - 3483621 - | response regulator receiver domain-containing protein TERM 3154 3484082 - 3484067 - H 90 -11.8 -4.14013 | overlap 3484058 GAAAATCGGCCAAAA GCCCGC CGGA GCGGGC CATCCTCGAAGCAAA Nham_3161 3484265 - 3485248 + | riboflavin biosynthesis protein RibF TERM 3155 3487018 - 3486978 - g 76 -8.3 -4.15044 | gap 1, overlap 3486982 GCCGCCGTCAACAAA CGGATCACCGACGCCTTC GAGACG GAAGGCGCCGATG-CCTG GTACACCGAGGGCGC ileS 3485337 - 3488336 + | isoleucyl-tRNA synthetase TERM 3156 3488655 - 3488685 + G 74 -9.6 -3.86835 | overlap 3488683 CCATCGGCAACGCCA TCGACCGCTTCGCC TAT GGCGCGGTGGTGGA TTTCGTCCTGTTTCA Nham_3163 3488333 - 3488827 + | lipoprotein signal peptidase Nham_3164 3488907 - 3489620 + | hypothetical protein Nham_3165 3489728 - 3491122 + | peptidase M16-like TERM 3157 3491240 - 3491219 - g 77 -4.3 -4.82901 | overlap 3491220 TCGCGGCGACAAAAA TCCAGCATC TGGT GACGCCGGG AGGGATCGAGGCTTG Nham_3166 3491119 - 3492516 + | peptidase M16-like Nham_3167 3492612 - 3493031 + | hypothetical protein Nham_3168 3494211 - 3493117 - | tISRso5; ISRSO5-transposase protein TERM 3158 3494748 - 3494762 + G 73 -6.4 -4.36914 | opp_overlap 3494740 CAAGGCACCCGCGTC GAGGTC AGC GATCTC TTTTATGCGACGCCC TERM 3159 3495156 - 3495179 + G 74 -10.2 -3.71848 | TCCGATTACCTGCCG CGCGACCGCC ATCC GGTGGTGGCG TTGTTCGTAACGACC mutL 3494319 - 3496130 + | DNA mismatch repair protein TERM 3160 3496223 - 3496236 + T 72 -6.7 -4.3739 | opp_overlap 3496223 GCTTCACGCGCAAAA TTGGC AAGA GCCAA TTTTGTCGCGAGCTC Nham_3170 3496825 - 3496271 - | hypothetical protein Nham_3171 3498892 - 3496829 - | pseudouridine synthase, Rsu Nham_3172 3499149 - 3499595 + | CMP/dCMP deaminase, zinc-binding TERM 3161 3499685 - 3499643 - T 71 -10.8 -3.53444 | overlap 3499621 TCATCGTCCGCGAAA GCGGACGATCCAGT-AACCA CCGCC CGGTTTACTGGAT-GCCCGC CTTCGCGGGTATGAC Nham_3173 3501006 - 3499720 - | phosphoribosylamine--glycine ligase xseA 3501088 - 3502713 + | exodeoxyribonuclease VII large subunit Nham_3175 3503528 - 3502710 - | dienelactone hydrolase TERM 3162 3502856 - 3502884 + g 72 -12.3 -3.30771 | opp_overlap 3502853 TGGGGTAGACGATGA TGCGGGCGAGCGC GCT GCGTCCGCGCGCA TTGTCGACCATCTGC TERM 3163 3503769 - 3503726 - H 100 -20.6 -4.27316 | gap 1, opp_overlap 3503719 3503721, overlap 3503727 3503729 CGCGTCAATTCAAAA TCATAGAGCCTCGCTTCTGAT TCC ATCAGAAGCGAGGCTCTA-GC CGATGGCGTGTTTGC TERM 3164 3503768 - 3503727 - H 100 -24.1 -3.16068 | gap 1, opp_overlap 3503719 3503721, overlap 3503726 3503729 GCGTCAATTCAAAAT CATAGAGCCTCGCTTCTGAT TCC ATCAGAAGCGAGGCTCTA-G CCGATGGCGTGTTTG TERM 3165 3503767 - 3503729 - H 100 -27.8 -3.13906 | opp_overlap 3503719 3503721, overlap 3503727 3503726 GTCAATTCAAAATCA TAGAGCCTCGCTTCTGAT TCC ATCAGAAGCGAGGCTCTA GCCGATGGCGTGTTT Nham_3176 3503810 - 3504037 + | hypothetical protein Nham_3177 3505153 - 3504146 - | tetraacyldisaccharide 4'-kinase TERM 3166 3504671 - 3504655 - G 72 -4.4 -4.56597 | gap 1, overlap 3504657 GTCCGGCCGGAAAAA CCT-GGC CGTT GCCGAGG CCACGAGCTCGGTCG Nham_3178 3506450 - 3505146 - | three-deoxy-D-manno-octulosonic-acid transferase-like Nham_3179 3507177 - 3506443 - | hypothetical protein TERM 3167 3507117 - 3507093 - G 81 -12.1 -3.90112 | overlap 3507096 3507106 TGTTGGTCAACCAAA CCAGCCGCAGA AAG CCTGCGGCCAG AAGGCCCGCGAACTG Nham_3180 3507425 - 3507174 - | hypothetical protein Nham_3181 3508306 - 3507491 - | inositol monophosphatase TERM 3168 3507690 - 3507648 - G 71 -9.1 -3.79747 | gap 1 TCATGCACGAGCAAA TCGGCGGCGGCGAGA-TCCC AGTC GCAACTCTGGCCGCCGGCGA AAGCCGCATCGATGC TERM 3169 3507869 - 3507829 - G 72 -3.9 -4.57569 | overlap 3507830 3507832 CGATCCTGGGAAAAA CCAGGGTGTCGCCGG-GCG TCGTC CGCACCGGC-ACGCCGTTG CGCGACGCGCCCTGC TERM 3170 3507947 - 3507905 - G 74 -10.5 -3.71848 | CGCGGCGAGGAAGAA CTCGTCCGTGGCCGGC-GCGA ACA CCGCCGCCAGCAGCGG-CGAG ACGCCCTCGACCAGC Nham_3182 3509684 - 3508293 - | peptidase U62, modulator of DNA gyrase TERM 3171 3509172 - 3509198 + g 76 -11.5 -3.73072 | gap 1, overlap 3509173 CACCATGCCGCCGAT GCCGGCGGACGC CGAC GCG-CCGCCGGA TTTGGTAACGCCCTT TERM 3172 3509173 - 3509197 + g 77 -15 -2.83522 | gap 1, overlap 3509172 ACCATGCCGCCGATG CCGGCGGACGC CGAC GCG-CCGCCGG ATTTGGTAACGCCCT TERM 3173 3510009 - 3509988 - g 71 -11.5 -3.45571 | overlap 3509990 GGCGTCAAACAGCAA CAGGCGGGA TCAA TCCCGCCGG GTCGAGCCGTGGCTT TERM 3174 3510007 - 3509990 - g 74 -12.7 -3.29837 | overlap 3509988 CGTCAAACAGCAACA GGCGGGA TCAA TCCCGCC GGGTCGAGCCGTGGC TERM 3175 3510375 - 3510350 - g 71 -8.9 -3.96148 | gap 1, overlap 3510351 CTTGCCGACGACAAA CGCGATCCGGCG CCG CGCCGG-CGGCG GAGCAATGCGATCAG Nham_3183 3509969 - 3510490 + | hypothetical protein ubiA 3511428 - 3510487 - | prenyltransferase Nham_3185 3512206 - 3511439 - | hypothetical protein TERM 3176 3511465 - 3511487 + g 72 -2.6 -4.7173 | GAACGTTGCCGCTCA GGGTGTCG AACGTGC TGCCACCC TTTTTCGATGTGGTC Nham_3186 3512479 - 3513264 + | hypothetical protein TERM 3177 3513473 - 3513483 + G 71 -8.2 -3.88787 | CCGCGATCCTTCAAC CGGC CGA GCCG TTTCTGGACCTGTCC TERM 3178 3514130 - 3514109 - g 71 -12.9 -3.0464 | overlap 3514100 3514097 AATCCACGCTGAAGA GCGGCGCGC TGCC GCGCGACGC GCTGACCATCATCAA hisZ 3513349 - 3514536 + | ATP phosphoribosyltransferase regulatory subunit TERM 3179 3515375 - 3515385 + G 71 -8.2 -3.89346 | CACGCTGCACTGCCC GCCG GAC CGGC TTTATGCGCTCGGCA hisG 3514533 - 3515510 + | ATP phosphoribosyltransferase TERM 3180 3516630 - 3516592 - g 73 -13 -3.21416 | overlap 3516579 3516593 CAGGCCGAGGACGAA CCGTCCGCCGGCGACCCG CAC CGGACCGCCGCCGAATGA GCGGCGATAAACCGT TERM 3181 3516629 - 3516593 - g 74 -14.3 -2.52635 | overlap 3516579 3516592 AGGCCGAGGACGAAC CGTCCGCCGGCGACCCG CAC CGGACCGCCGCCGAATG AGCGGCGATAAACCG Nham_3189 3515584 - 3516630 + | glycosyl transferase family protein Nham_3190 3516627 - 3517469 + | YdjC-like protein TERM 3182 3517658 - 3517648 - g 73 -8.2 -4.07568 | opp_overlap 3517630, overlap 3517649 CGCCGGCGTCGAAAA CGCG CCG CGCG ATCCTGCCGCCGCCG TERM 3183 3518084 - 3518108 + G 77 -13.6 -3.29144 | gap 1, overlap 3518074 GCGGCGGCCGCAGCC GCAGGC-GCCG TGGG CGGCGGCCTGC TTCTGAGCAGCATCC Nham_3191 3517586 - 3518416 + | putative periplasmic ligand-binding sensor protein TERM 3184 3518461 - 3518441 - T 100 -15.4 -4.30576 | opp_overlap 3518441 3518442 TTCGCAGCAGCAAAA CGGCCGCC GATGG GGCGGCCG TTTCCGTCTCAGTCG TERM 3185 3518441 - 3518461 + T 95 -15.4 -3.71873 | opp_overlap 3518441, overlap 3518442 TTCGCAGCAGCAAAA CGGCCGCC GATGG GGCGGCCG TTTCCGTCTCAGTCG Nham_3192 3519287 - 3518508 - | ErfK/YbiS/YcfS/YnhG Nham_3193 3519605 - 3520387 + | hypothetical protein TERM 3186 3520414 - 3520435 + T 91 -13 -4.07246 | opp_overlap 3520397 3520414 ATCCCTCGTTGAGAA TGCCCGGC CGCCGC GCCGGGCA TTTGGTTTGAAATCG TERM 3187 3520435 - 3520414 - T 79 -13 -3.28791 | opp_overlap 3520414, overlap 3520397 ATCCCTCGTTGAGAA TGCCCGGC CGCCGC GCCGGGCA TTTGGTTTGAAATCG Nham_3194 3521164 - 3520607 - | hypothetical protein TERM 3188 3520942 - 3520955 + g 71 -5.9 -4.26903 | overlap 3520932 CAGCCTCGGTCCGCG CCCGG TCGT TCGGG TTTTGATAGGATGCA TERM 3189 3521619 - 3521607 - g 79 -9.1 -4.18494 | CACCGCCAGGGAAAA GCCCT CGC AGGGC GAAGTCATCGCCGTC groES 3521497 - 3521793 + | co-chaperonin GroES TERM 3190 3523207 - 3523171 - g 74 -5.8 -4.42238 | gap 1, overlap 3523174 CGAGGTCAAGGAAAA GAAGGATCGCGTCGAGG ATGC CCTCAACGCCACCCG-C GCAGCCGTGCAGGAA TERM 3191 3523205 - 3523174 - g 95 -13 -4.32402 | overlap 3523171 GGTCAAGGAAAAGAA GGATCGCGTCGAGG ATGC CCTCAACGCCACCC GCGCAGCCGTGCAGG groEL 3521996 - 3523633 + | chaperonin GroEL TERM 3192 3523660 - 3523683 + F 100 -18.2 -5.00616 | opp_overlap 3523663 TGCACGACTTCGCCA GAAGGCCGCC TCCG GGCGGCCTTC TTTTTTGGCGAAGCC TERM 3193 3523680 - 3523663 - f 86 -14.1 -3.2963 | opp_overlap 3523660 ACGACTTCGCCAGAA GGCCGCC TCCG GGCGGCC TTCTTTTTTGGCGAA TERM 3194 3524098 - 3524041 - g 84 -14.1 -3.68351 | CCGGCACGACCCAAA GCATCGGCGACAAGCTTCCGGTCGAGG TCAA CCTCACCCGCAAGCCCACCGGCGATAC GTTCGAGTTCGAGGG TERM 3195 3524633 - 3524600 - g 70 -10.3 -3.64822 | AGCCCTCGACGCAAA GCCGGTGTCAACA AAATGGAG TGACGACACCGGC AAGCTGACGCTGACC Nham_3197 3523740 - 3524939 + | hypothetical protein TERM 3196 3525073 - 3525053 - T 81 -12.6 -3.53224 | opp_overlap 3525054 CATTGCCGGGCTAAA GCGCGAAG CGCGT CTTCGCGC AGACGTCCCGGCCAT Nham_3198 3525577 - 3525170 - | hypothetical protein Nham_3199 3526865 - 3525855 - | hypothetical protein TERM 3197 3527289 - 3527264 - g 100 -18.3 -4.4078 | TGTTTCCAATGAAAA GGGCCGCAGCG GAGA CGCTGCGACCC GGAACTCAAGTATTG Nham_3200 3527091 - 3527483 + | hypothetical protein Nham_3201 3527959 - 3527501 - | hypothetical protein TERM 3198 3527605 - 3527625 + g 100 -5.3 -5.40072 | overlap 3527604 3527606 CAACGGCTGGCTTTC GCGCGGC ACGTTTG GCCGCGG TTTTTTTCACCGAAG TERM 3199 3527606 - 3527624 + g 71 -8.8 -3.83561 | overlap 3527604 3527605 AACGGCTGGCTTTCG CGCGGC ACGTTTG GCCGCG GTTTTTTTCACCGAA TERM 3200 3527772 - 3527791 + g 76 -6.4 -4.45068 | overlap 3527774 TTCTTGGCGGATTTT TTGGCGGA TTTC TTCGCCGA TTTCTTCTTCGCCGT Nham_3202 3529299 - 3527983 - | protein of unknown function DUF224, cysteine-rich region TERM 3201 3528795 - 3528748 - G 95 -18.5 -3.53091 | gap 3, opp_overlap 3528779 3528780, overlap 3528750 ACCCTGCGCCGGAAA CACGCTGCCGGCGCGCGCT-CCGG GAG CCGGCAGCG-ACGCCGGC-GCGAG CGCCAGCATCGCCTT TERM 3202 3528782 - 3528750 - G 95 -20.5 -3.34398 | opp_overlap 3528779 3528780, overlap 3528748 CCTGCGCCGGAAACA CGCTGCCGGCGCGCG CTC CGGGAGCCGGCAGCG ACGCCGGCGCGAGCG Nham_3203 3530654 - 3529296 - | FAD linked oxidase-like TERM 3203 3530513 - 3530569 + g 74 -14.5 -2.61322 | gap 4, overlap 3530512 GCCCCCTGATCTCGA GCGGCTGTTCGCCGGCGATGGCGGCGCGC ACC GCG-GCCTCCA-CGTCGGCGG-C-GTCGC GTATTTGCAGGATGT TERM 3204 3530692 - 3530657 - R 79 -12.7 -3.37796 | gap 1, overlap 3530658 3530690 GGCCACTAGGCACAA CCGGTTCTCTTCCCCC TTATG GGGGGAAGAGAA-CGC TTCCGCATGTGCGGA TERM 3205 3530691 - 3530658 - R 84 -16.2 -2.62463 | gap 1, overlap 3530657 3530690 GCCACTAGGCACAAC CGGTTCTCTTCCCCC TTATG GGGGGAAGAGAA-CG CTTCCGCATGTGCGG TERM 3206 3530711 - 3530690 - R 81 -12.3 -3.65991 | overlap 3530658 3530657 ATGGGGGGAAGAGAA CGCTTCCGC ATGT GCGGAAACG ACACCGTACTCCAGC Nham_3204 3532235 - 3530742 - | FAD linked oxidase-like TERM 3207 3531730 - 3531753 + g 72 -7.4 -4.11371 | GTGGTCATGCCGTAT TTCAGGCAGT GAAC GCCGCCTGAA TTTTCCGCGATGTTG Nham_3205 3532717 - 3533118 + | cytochrome c, class I Nham_3206 3533810 - 3533127 - | TetR family transcriptional regulator Nham_3207 3534222 - 3533971 - | hypothetical protein TERM 3208 3534280 - 3534300 + r 71 -12.6 -2.55074 | opp_overlap 3534278 TTCGAGCGAAGCATG TCCTCGGG CTTGA CCCGAGGA TGGGTTCCGGTTCGC Nham_3208 3534544 - 3534389 - | hypothetical protein TERM 3209 3535038 - 3535007 - g 73 -8.6 -4.07885 | opp_overlap 3535028 3535029, overlap 3535009 CACCGTTCCGCAAAA CATCGTCGTCGGTG CGAC CATCGCCGACGAAG GCGTCGCCCTTTACG TERM 3210 3535036 - 3535009 - g 70 -9.8 -3.63744 | opp_overlap 3535028 3535029, overlap 3535007 CCGTTCCGCAAAACA TCGTCGTCGGTG CGAC CATCGCCGACGA AGGCGTCGCCCTTTA Nham_3209 3534783 - 3535160 + | hypothetical protein TERM 3211 3535278 - 3535318 + T 100 -16.3 -3.64822 | gap 1, overlap 3535284 CCGTCACGCGGGCGA CCGGAA-CCCCGTCCC GTCACCTCCA GGGACGGGGTTTCCGG TTTACCTCGGCGAGT TERM 3212 3535284 - 3535311 + T 78 -11.3 -3.72363 | overlap 3535278 CGCGGGCGACCGGAA CCCCGTCCC GTCACCTCCA GGGACGGGG TTTCCGGTTTACCTC glyS 3537646 - 3535352 - | glycyl-tRNA synthetase subunit beta TERM 3213 3536436 - 3536446 + g 93 -3.2 -5.61881 | GCCGCGCGCTTCGCC TTCG CAA CGAG TTTTTCTTTTTCCGC TERM 3214 3536465 - 3536493 + g 71 -11 -3.53012 | TTCTTTTTCCGCGCC TTGCGCGGTTGG CACGA CCAGCGGCGCAA TTTCGGCGGCCAACC TERM 3215 3536527 - 3536546 + g 89 -10.7 -4.25104 | overlap 3536509 CGATGCGCGCGATGC GCTCGGC TTGCGT GCCGAGC TTTTCGTGGAACACG TERM 3216 3536663 - 3536695 + g 93 -19.1 -3.19789 | GATCACGCGCTCGTT GCCGGCGACGATGGC CTT GCCGCCGTCGCTGGC TTCGATGTTGGCTGT glyQ 3538594 - 3537650 - | glycyl-tRNA synthetase subunit alpha Nham_3212 3538959 - 3538768 - | hypothetical protein Nham_3213 3540065 - 3539184 - | peptidase S49 TERM 3217 3539474 - 3539488 + g 77 -12.8 -3.66556 | CGTCCTCCCCCTTCA GCCGCG CAC CGCGGC TTGTCTTGACCAGTT TERM 3218 3539756 - 3539742 - G 70 -12.8 -2.94747 | overlap 3539714 GCAGGCGATCATATA GCCGCC GGA GGCGGC GACGTCCTCGACGAA Nham_3214 3541108 - 3540242 - | methyltransferase small Nham_3215 3541414 - 3542424 + | farnesyltranstransferase Nham_3216 3543450 - 3542539 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Nham_3217 3545382 - 3543601 - | tetratricopeptide TPR_2 TERM 3219 3543642 - 3543673 + g 71 -5.8 -4.28254 | gap 2, overlap 3543635 3543640 3543640 TCTTGTCAGCCGACG CCGCC-GCCGG-GG TTTCAT CCGCCGGCAGGCCG TTTTCGATCTTGGCC Nham_3218 3547321 - 3545579 - | electron-transferring-flavoprotein dehydrogenase TERM 3220 3547136 - 3547117 - G 79 -13.6 -3.40403 | opp_overlap 3547114 CCTTTTCGACGACAA CGATGCCG AGAT CGGCATCG AGCTGCTTGAGCCGG TERM 3221 3547347 - 3547331 - H 72 -9.3 -3.74056 | GAACAACCATGGAAA GCGCCCC TCC GGGGTGC CACGCAGAGCCCTGC TERM 3222 3547463 - 3547433 - H 74 -6.8 -4.35926 | opp_overlap 3547427 3547435, overlap 3547434 3547435 ATGTCAAATTCAAAA CTCCACTGGAAACT TGG AGTTGCCAGTGGTC TCATGGTTCTAACAT TERM 3223 3547461 - 3547435 - H 74 -13.8 -2.52017 | opp_overlap 3547427 3547435, overlap 3547434 3547433 GTCAAATTCAAAACT CCACTGGAAACT TGG AGTTGCCAGTGG TCTCATGGTTCTAAC TERM 3224 3547435 - 3547461 + H 77 -13.8 -2.87963 | opp_overlap 3547435 3547434 3547433, overlap 3547427 GTCAAATTCAAAACT CCACTGGAAACT TGG AGTTGCCAGTGG TCTCATGGTTCTAAC Nham_3219 3547563 - 3548432 + | phage SPO1 DNA polymerase-related protein Nham_3220 3549952 - 3548444 - | hypothetical protein Nham_3221 3550860 - 3550057 - | ribonuclease H Nham_3222 3552189 - 3551026 - | radical SAM family protein Nham_3223 3552815 - 3552252 - | molybdopterin binding domain-containing protein Nham_3224 3553876 - 3552953 - | protein of unknown function, zinc metallopeptidase putative TERM 3225 3555227 - 3555195 - g 74 -9.1 -3.96216 | gap 1 CGTCGACGCAAAGAA GCGTCAT-GGCGCG TTGGTG CGCGCCGACGGCGC CATCATGCTCGGCGA Nham_3225 3554263 - 3555393 + | DNA methylase N-4/N-6 TERM 3226 3555512 - 3555486 - f 77 -2.1 -5.1675 | GCATTGAGCAAAAAA TCCGAGCATGG AATGA CCCTTCGCGGA CATCCGCCCGCGTCC TERM 3227 3555806 - 3555789 - g 77 -2.6 -5.00884 | ACCTCGGCGAAAAAA CCGGTA AGTTCA TGCCGG CCAATACGCCGGCCA Nham_3226 3555563 - 3556249 + | glutathione S-transferase-like TERM 3228 3556273 - 3556298 + T 84 -6.8 -4.86731 | CATCAACGGCAACGA GGCCTTTCGG CTCCCA CCGGAGGGTC TTTTGTTTGCGCGGC Nham_3227 3557579 - 3556401 - | A/G-specific adenine glycosylase TERM 3229 3557510 - 3557543 + g 71 -5.1 -4.52669 | overlap 3557528 GGAGTCCGGGCCTGT CCTGCGAACGCGG AGCGGCAG CGGCGATCGCTGG TTTCTTTCGCTTGTT Nham_3228 3557609 - 3558088 + | hypothetical protein Nham_3229 3558195 - 3558857 + | twin-arginine translocation pathway signal TERM 3230 3558926 - 3558868 - f 73 -12.7 -2.73124 | gap 5, opp_overlap 3558870 3558873 GCTGATGGGCGAAAC GCTCCCTGCCGTCGTCCCCGCCTCGTGCGC AATT GCGCACGAGGCGGGGACGACG-CTG--A-- CAGTTTTGGTTGGCG TERM 3231 3558870 - 3558928 + F 100 -29.7 -3.24146 | gap 1, opp_overlap 3558868, overlap 3558873 TGATGGGCGAAACGC TCCCTGCCGTCGTCCCCGCCTCGTGCGC AATT GCGCACGAGGCGGGGACGACG-CTGACA GTTTTGGTTGGCGCC TERM 3232 3558873 - 3558929 + F 100 -30.5 -4.4078 | gap 3, opp_overlap 3558868, overlap 3558870 TGGGCGAAACGCTCC CTG-C--CGTCGTCCCCGCCTCGTGCGC AATT GCGCACGAGGCGGGGACGACGCTGACAG TTTTGGTTGGCGCCC TERM 3233 3560787 - 3560758 - g 82 -11.3 -3.96892 | overlap 3560762 AAGGGTTACGAGAAA GCGATCGGCGCCG TGCT CGGCGACGACCTC GACGCACCGGTGGAT TERM 3234 3561941 - 3561908 - g 70 -10.1 -3.67417 | overlap 3561909 ATACCGAACGGGAAA TCCGCGACATGCTCG AGGT CGAGCCCGACGCGGT CGCCTCGCTGGCCGA TERM 3235 3561940 - 3561909 - g 72 -13.6 -2.79968 | overlap 3561908 TACCGAACGGGAAAT CCGCGACATGCTCG AGGT CGAGCCCGACGCGG TCGCCTCGCTGGCCG Nham_3230 3559156 - 3562668 + | chromosome segregation protein SMC TERM 3236 3562763 - 3562794 + F 70 -2.2 -4.8048 | gap 1, overlap 3562764 3562765 CATCCTCCTTCCTGG ATG-GATGCCCGGAT CAA GTCCGGGCATGACGG TTTTTCATGTAGCAG TERM 3237 3563599 - 3563589 - g 90 -2.4 -5.45802 | opp_overlap 3563591 GCGTCAAAACAAAAA GCCG CGC CGGA CTGGTGCCATTTCGT Nham_3231 3562827 - 3563897 + | methyltransferase type 12 Nham_3232 3564333 - 3563905 - | hypothetical protein TERM 3238 3564462 - 3564441 - H 78 -11.5 -3.71378 | opp_overlap 3564453 TATTCCAGACCTAAA GGTGCCGCC TCCC GGCGGAACC TGCCGTTTGCTGCCG TERM 3239 3564453 - 3564467 + H 72 -9.2 -3.73775 | opp_overlap 3564441 AAAGGTGCCGCCTCC CGGCGG AAC CTGCCG TTTGCTGCCGCTCGC Nham_3233 3564539 - 3565099 + | hypothetical protein TERM 3240 3565129 - 3565147 + F 74 -13.2 -3.01712 | opp_overlap 3565115 3565129 3565136, overlap 3565129 ATTCGACTGTCAAGA CGAGGAAC CCC GTTCCTCG TCTTCGAGCAACGAC TERM 3241 3565147 - 3565129 - f 76 -13.2 -3.04263 | opp_overlap 3565129 3565129, overlap 3565115 3565136 ATTCGACTGTCAAGA CGAGGAAC CCC GTTCCTCG TCTTCGAGCAACGAC TERM 3242 3565299 - 3565321 + G 86 -7.8 -4.72272 | TCTACACCCACATCG CATCGAAC AAGATCC GTTCGATG TTTTTGCTCGCCGGG TERM 3243 3566388 - 3566330 - g 85 -14.5 -3.61178 | gap 1, overlap 3566348 GCGACCGATCCCAAA CTGCCCGGCGGACAGGAACTCGCGCC GGGGCCGT GGAGCGAGCCCACG-CCGCCGGCCAG CGCGCCGCCGCCCGC Nham_3234 3565268 - 3566431 + | peptidase M48, Ste24p TERM 3244 3566841 - 3566812 - g 77 -15.8 -2.62983 | TTCACCCGGATATCA CCGAGATCGTCG ACATGA CGACGACCTCGG ACCAGATGAAAATCT Nham_3235 3566646 - 3567404 + | hypothetical protein Nham_3236 3567526 - 3568203 + | hypothetical protein Nham_3237 3568783 - 3568244 - | adenine phosphoribosyltransferase Nham_3238 3571106 - 3568914 - | anthranilate synthase TERM 3245 3570320 - 3570297 - G 74 -9.6 -3.90744 | gap 1 CGGCTCGGCAAACAA CTGTCCG-GGC ACC GCCTCGAACAG GTCGCCGCGTGCGAA TERM 3246 3570322 - 3570349 + g 73 -11.3 -3.55563 | gap 1, opp_overlap 3570320, overlap 3570323 ACCGCCTCGAACAGG TCGCCGCGTGCG AACGC CGCACGCG-CGG TTTCCACCGTGGCCT TERM 3247 3570969 - 3570931 - G 74 -13.1 -3.3506 | overlap 3570962 TCGAAACTCTCATAA CGTCCCGGCACCGTCGT GCCCG ACGACAGCACCAGGCCG CGGCGGCGGTCGAGT TERM 3248 3571183 - 3571161 - H 100 -9.1 -5.42514 | opp_overlap 3571161 GGACAAACGAAAAAA GGCCGTCGT TCTGC ATGACGGCC TTTGACGATCAAAAC TERM 3249 3571161 - 3571183 + H 74 -11.3 -3.57144 | opp_overlap 3571161 GGACAAACGAAAAAA GGCCGTCGT TCTGC ATGACGGCC TTTGACGATCAAAAC Nham_3239 3571301 - 3571924 + | YbhB and YbcL TERM 3250 3571954 - 3571973 + T 83 -9.2 -4.4078 | opp_overlap 3571954 TCCCGAAACGAAAAA CGGCTCCC GCAA GAGAGCCG TTTTGATTCAGCGCG TERM 3251 3571973 - 3571954 - T 100 -11.4 -4.98531 | opp_overlap 3571954 TCCCGAAACGAAAAA CGGCTCCC GCAA GAGAGCCG TTTTGATTCAGCGCG Nham_3240 3574067 - 3572001 - | cytochrome c1 TERM 3252 3572435 - 3572457 + g 73 -11.2 -3.60151 | opp_overlap 3572420 3572419, overlap 3572447 CGGGCGGAGCCGCAC CGCCGTTGGC CGC GCGAGCGGCG TTCTCGTTTGGAAAC Nham_3241 3574657 - 3574130 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 3253 3575189 - 3575165 - g 71 -11.3 -3.53224 | opp_overlap 3575169 TATTCGGGCGTGAAA GCGCCGGGGTC CCG GACGCCGTCGC AGCGGCCGCCGATGC Nham_3242 3574855 - 3575325 + | tRNA/rRNA methyltransferase (SpoU) Nham_3243 3575322 - 3575954 + | hypothetical protein TERM 3254 3576271 - 3576247 - g 70 -9.9 -3.62522 | opp_overlap 3576267 TAAGCTCCTCAACAA CGTCGAAGGAC TCG GCCCGCCGACG CTGGAGAATCTGGCG Nham_3244 3576026 - 3576391 + | putative 6-pyruvoyl tetrahydropterin synthase Nham_3245 3577153 - 3576515 - | tetratricopeptide TPR_2 TERM 3255 3576893 - 3576906 + g 76 -8.1 -4.11216 | overlap 3576878 GACCTCGGGGTGATC GAGCC CGAG GGCTC TTTTCCAGGTCGCCA TERM 3256 3577205 - 3577195 - H 77 -2.4 -5.15634 | GAGTTTAGCAAAAAA GCGG ACG CCGA TATGCCTAGTGAAGT TERM 3257 3577453 - 3577486 + H 81 -14.9 -2.63112 | gap 1, opp_overlap 3577446 GGAATCGATCACGTT C-ATGATTTTGGATCG ATT CGATCCAAAATCATCG TGATCTAGCCGGTTT Nham_3246 3577523 - 3578410 + | coproporphyrinogen III oxidase Nham_3247 3579674 - 3578418 - | polynucleotide adenylyltransferase region TERM 3258 3578615 - 3578598 - G 74 -10.5 -3.75153 | opp_overlap 3578614 CGCCTTCAATGGAAA CGCCGGC GGCT GCCAGCG CTGCGGCAGGGTTGC Nham_3248 3579934 - 3579671 - | hypothetical protein Nham_3249 3580596 - 3579931 - | NUDIX hydrolase TERM 3259 3580558 - 3580584 + g 73 -6.4 -4.33417 | GTCGAAAAAATCCTC GGTGCCGGCATC GGT GGTCGCGGCGCC TTTCTTCTCCATAGG Nham_3250 3581210 - 3580605 - | hypothetical protein TERM 3260 3580840 - 3580878 + g 73 -6.5 -4.26076 | AAATCGCACGGTACC CAGTCGCCGACATTGGT GCGGA ACCGGAGCCGGCGGCCG TTTTCGTCCCGCTCC Nham_3251 3581549 - 3582589 + | ATPase TERM 3261 3583223 - 3583187 - g 70 -12.9 -2.88822 | opp_overlap 3583192, overlap 3583184 TCGCGGAGATAACCA CCATGCTCGCCGGGC TGTCGGC GTCCGGCGCGCACGG CACGTTGCTGCAGGT Nham_3252 3582589 - 3583530 + | hypothetical protein TERM 3262 3583796 - 3583784 - g 74 -10.5 -3.75153 | GGTCTGGAATCCAAA GGCCG GCG CGGCC CGCAGCACCGCGCCA TERM 3263 3585522 - 3585540 + G 70 -10.2 -3.65991 | overlap 3585523 GCCGCGCTGCTGCTC GCGCTGGC GCT GCCAGCGG TTGTCTTGGCACCCT TERM 3264 3585523 - 3585539 + G 72 -13.7 -2.79273 | overlap 3585522 CCGCGCTGCTGCTCG CGCTGGC GCT GCCAGCG GTTGTCTTGGCACCC Nham_3253 3583527 - 3586343 + | double-transmembrane region-like TERM 3265 3587027 - 3586996 - g 84 -15.9 -3.30441 | opp_overlap 3586986, overlap 3587003 3587004 GATCACCGGCCACAA CGACGAACGCGAC CGCCGC GTCGCGATCGTCG CAGCACCCCGTTTCG TERM 3266 3588422 - 3588452 + G 72 -11.9 -3.33315 | overlap 3588421 ATGGGCGTGCGGATG CG-CGACGCCAGCGT GGT GCGC-GGCGTCGGCG TTCTGCCGGTGTTCG Nham_3254 3586472 - 3588535 + | hypothetical protein TERM 3267 3589171 - 3589137 - f 86 -14.3 -3.30124 | gap 1, overlap 3589157 TTCCACTTGCCATAA CGCTCCGGCAAGTCAC ACCA GTG-CGCGCCGGAGCG CAGCACCCACAGACA TERM 3268 3589511 - 3589481 - f 79 -13.4 -3.10935 | overlap 3589477 3589474 3589475 ATTCAAAATCATAGA GCCTCGCTTCTGAT TCC ATCAGAAGCGAGAA GGCTCTAAAGGTCCC TERM 3269 3589665 - 3589681 + F 78 -11.5 -3.67611 | CGGTAGGCGTGGCGA GCCTCCG CTG CGGGGGC TTCTGTTGCGATGAA Nham_3256 3589692 - 3590123 + | hypothetical protein TERM 3270 3591173 - 3591136 - g 77 -4 -4.82901 | gap 1, opp_overlap 3591163, overlap 3591138 CGGCGTGCAGAAAAA TACCG-CGACCGACTCG AACGG CGGCTCGGTCGGCGGCT CCTACCTGTTCGACG TERM 3271 3591171 - 3591138 - g 73 -8.8 -4.03995 | gap 1, opp_overlap 3591163, overlap 3591136 GCGTGCAGAAAAATA CCG-CGACCGACTCG AACGG CGGCTCGGTCGGCGG CTCCTACCTGTTCGA Nham_3257 3590249 - 3592597 + | TonB-dependent receptor, plug TERM 3272 3592607 - 3592637 + T 79 -12.5 -3.27771 | overlap 3592598 3592605 3592599 TACTGAGCGGGTCTT CGTCAGGCCCGGC TTCAT GCCGGGCATCACG TCTTCCTGTTATCGA TERM 3273 3592666 - 3592697 + T 75 -9.5 -3.83214 | gap 1, opp_overlap 3592666 3592664 3592684 GATTTGGATCAAAGA CGTAGATGGCCGGA ACAAG TCCGGCCATG-ACG TTTGAATTGATTTCA Nham_3258 3593287 - 3592715 - | GCN5-related N-acetyltransferase TERM 3274 3592844 - 3592814 - G 84 -15.5 -3.2614 | gap 1, opp_overlap 3592804 3592803, overlap 3592816 GAGTTCGCACACCAA TA-GCCGGGCCCGA TCGA CCGGGCCCGGCATA TCGACCTGCCCTTTC TERM 3275 3592841 - 3592816 - G 95 -19.7 -3.19602 | opp_overlap 3592804 3592803, overlap 3592814 GTTCGCACACCAATA GCCGGGCCCGA TCGA CCGGGCCCGGC ATATCGACCTGCCCT Nham_3259 3593807 - 3593301 - | NUDIX hydrolase TERM 3276 3594407 - 3594423 + G 81 -10.1 -4.18401 | overlap 3594406 CGGCGAAGCCGACAG CGAGCGC CGC GCGTTCG TTTTACAGTATGTGC TERM 3277 3594695 - 3594706 + G 77 -2.2 -4.99035 | CCACACCCTGCCCTA TCTG ATCC CGGA TTTTTATGTGGCTAC TERM 3278 3594826 - 3594840 + G 76 -5.6 -4.56597 | overlap 3594821 3594822 3594827 CATTCCAGATCGCGG TCGGCG GCG CGCTGG TTTTTGCCGCCGGAA Nham_3260 3593919 - 3594875 + | rubrerythrin TERM 3279 3594871 - 3594917 + F 100 -20.4 -4.20868 | overlap 3594864 3594872 TCCTGATTGGGAGCG CCTAGAGCGCTTCGCTTCTGAT TGT ATCAGAAGCGAAACGTTCTAGA TTATTGTTTTGACGC TERM 3280 3594872 - 3594916 + F 100 -23.9 -3.11798 | overlap 3594864 3594871 CCTGATTGGGAGCGC CTAGAGCGCTTCGCTTCTGAT TGT ATCAGAAGCGAAACGTTCTAG ATTATTGTTTTGACG TERM 3281 3595506 - 3595536 + G 70 -11.9 -3.14132 | gap 2 GCCACTGACACTGAT CGGCGTGTCGTCGGC GGT GCCGAC--CGCGCCG TTCATGGCGACCGGC Nham_3261 3595021 - 3595977 + | metallophosphoesterase Nham_3262 3596332 - 3595994 - | transposase Nham_3263 3596748 - 3596380 - | IS5 family transposase OrfA TERM 3282 3597085 - 3597116 + G 71 -5.8 -4.38712 | gap 1, overlap 3597088 TCGCTTGATGCATTG TTCTCATCGGTGCGC GTG GTGCACCGCCG-GAA TTTTCTGACAGTGGG Nham_3264 3597055 - 3597690 + | CMP/dCMP deaminase, zinc-binding TERM 3283 3597791 - 3597803 + T 76 -4.7 -4.8622 | opp_overlap 3597791 TGTCGAGGAATCGAA GCCGG GCT CCCGC TTTTTGCTTCACGAC Nham_3265 3598186 - 3597812 - | hypothetical protein Nham_3266 3598557 - 3598294 - | hypothetical protein Nham_3267 3599030 - 3598554 - | glutathione peroxidase Nham_3268 3599335 - 3599078 - | hypothetical protein TERM 3284 3600024 - 3600074 + G 70 -11.6 -3.15544 | opp_overlap 3600016 GAGGACATCCAGCAC GCCGCCGACGTGCTGCGGCCGGTC TAC GATCGGCTCCATGGCGCCGACGGC TTCGTGAGCCTCGAG TERM 3285 3601065 - 3601038 - g 84 -11.2 -4.23674 | overlap 3601039 GCGGACGAAGACAAA TGGCTGGGCTGG CTTG CAAGCCCAGCCG CGGAATTCGACCGGG TERM 3286 3601064 - 3601039 - g 80 -14.7 -3.13722 | overlap 3601038 CGGACGAAGACAAAT GGCTGGGCTGG CTTG CAAGCCCAGCC GCGGAATTCGACCGG Nham_3269 3599763 - 3602615 + | bifunctional transaldolase/phosoglucose isomerase TERM 3287 3602706 - 3602679 - f 86 -12 -3.95219 | CGTAAATGCGATAAA CTCCAGGGGAAC AAAT GTTCCCCTGATG CGTAAGTCCTGTACC Nham_3270 3602897 - 3603910 + | 6-phosphogluconate dehydrogenase-like protein TERM 3288 3604850 - 3604829 - g 78 -10.1 -4.08945 | opp_overlap 3604829, overlap 3604818 ACCACGCCGGTAAAA TCGGCGACC AGGC GGTCGGCGA TTATCGCAAAACCCC Nham_3271 3603910 - 3605424 + | glucose-6-phosphate 1-dehydrogenase Nham_3272 3605457 - 3606164 + | 6-phosphogluconolactonase Nham_3273 3606161 - 3606697 + | carbohydrate kinase, thermoresistant glucokinase Nham_3274 3606694 - 3607497 + | Cof protein Nham_3275 3609344 - 3607551 - | glycoside hydrolase 15-related TERM 3289 3607666 - 3607645 - G 73 -8.7 -4.07687 | opp_overlap 3607658 AGCGCCTGCGGAAAA TTGCCGGTC AGGC GACGGGCAA CCGTATCGTATTCCT TERM 3290 3607823 - 3607877 + g 91 -15.7 -3.85698 | gap 1 CGATCGGCGGCTGTT CGTCCGATGCCGCGCGCGGATCGTGC CGGA GCACGAAAC-CGCCCGGCATCAGATG TTTCTCGACCGCCGC TERM 3291 3609652 - 3609705 + r 76 -6.9 -4.41494 | gap 1, opp_overlap 3609642 3609656 3609659, overlap 3609660 3609661 GGACATGCTTTGCTC GAAAGCACTCTAGAGTCTGATTCAAC TGC GTTGAATCAGACTCTAGCTT-TATCC TTTTGATTGAGCATG TERM 3292 3609702 - 3609656 - R 74 -11 -3.53091 | opp_overlap 3609652 3609660 3609661, overlap 3609642 3609659 ATGCTTTGCTCGAAA GCACTCTAGAGTCTGATTCAAC TGC GTTGAATCAGACTCTAGCTTTA TCCTTTTGATTGAGC TERM 3293 3609699 - 3609659 - R 88 -17.1 -2.90496 | opp_overlap 3609652 3609660 3609661, overlap 3609656 CTTTGCTCGAAAGCA CTCTAGAGTCTGATTCAAC TGC GTTGAATCAGACTCTAGCT TTATCCTTTTGATTG TERM 3294 3609660 - 3609698 + r 100 -20.6 -4.2331 | opp_overlap 3609659 3609656, overlap 3609652 3609661 TTTGCTCGAAAGCAC TCTAGAGTCTGATTCAAC TGC GTTGAATCAGACTCTAGC TTTATCCTTTTGATT TERM 3295 3609661 - 3609697 + r 100 -24.1 -3.12359 | opp_overlap 3609659 3609656, overlap 3609660 3609652 TTGCTCGAAAGCACT CTAGAGTCTGATTCAAC TGC GTTGAATCAGACTCTAG CTTTATCCTTTTGAT Nham_3276 3611609 - 3609762 - | diguanylate cyclase/phosphodiesterase TERM 3296 3610805 - 3610791 - G 77 -4.2 -4.8622 | overlap 3610793 TCCGTCAATGAAAAA CGGC GCCTTCA GCCG CTGCAACAGGAATTC Nham_3277 3612372 - 3611914 - | alkylhydroperoxidase AhpD core Nham_3278 3614024 - 3612405 - | EmrB/QacA family drug resistance transporter TERM 3297 3613515 - 3613488 - G 70 -12.7 -2.87132 | GTTCTCGGTGAGATA GCCGCCGATCG TCGGGC CGATCGCCGGC GCAAAGGTCGCCGAC Nham_3279 3615306 - 3614149 - | secretion protein HlyD TERM 3298 3614696 - 3614712 + g 82 -3 -5.24129 | gap 1, overlap 3614667 3614684 GCCTTGCTGCGCTCG GTCG-TG AGCA CATCGAC TTTTTTATGCGCCGC TERM 3299 3616137 - 3616162 + G 88 -7.4 -4.82901 | opp_overlap 3616121 3616119 3616131 3616130, overlap 3616130 3616134 CGGCGAAACGCTTCG CGCCGCAGCC TTGCGT GGCGTCGGCG TTTTTCTGGCGGCGG Nham_3280 3615457 - 3616368 + | LysR family transcriptional regulator Nham_3281 3617644 - 3616694 - | multicopper oxidase, type 3 Nham_3282 3618066 - 3617710 - | cytochrome c, class IC Nham_3283 3618743 - 3618066 - | cytochrome c, class I Nham_3284 3619842 - 3618766 - | multicopper oxidase, type 3 Nham_3285 3620805 - 3620155 - | cytochrome c biogenesis factor Nham_3286 3621797 - 3621369 - | BadM/Rrf2 family transcriptional regulator Nham_3287 3622228 - 3624573 + | molybdopterin oxidoreductase TERM 3300 3624735 - 3624752 + F 85 -2.7 -5.52986 | gap 1, overlap 3624737 AGTTGCTGCCGCATT GA-GATGG ATG CCGTCGTC TTTTTTTCGTCCGGT Nham_3288 3624978 - 3625763 + | hypothetical protein Nham_3289 3626091 - 3627632 + | nitrate reductase, beta subunit Nham_3290 3627933 - 3629042 + | transposase, IS4 TERM 3301 3629384 - 3629402 + T 93 -13.1 -4.40333 | TCCCGACCCGACTTG GCCCGCC TCCCC GGCGGGC TTTCTCTTGTTTCGC TERM 3302 3629490 - 3629517 + T 95 -11.2 -4.79223 | overlap 3629491 3629501 AATCCCCCATCCGTG AGCCCCTGCCGT GAAA ACGGTGGGGGCC TTTTTCGTGATCTCA TERM 3303 3629491 - 3629516 + T 87 -14.7 -3.46811 | overlap 3629490 3629501 ATCCCCCATCCGTGA GCCCCTGCCGT GAAA ACGGTGGGGGC CTTTTTCGTGATCTC TERM 3304 3629769 - 3629794 + T 76 -6.8 -4.41348 | CTTAGTTCCTGACTT GGCCCGCT CTTTCCTCCT GGCGGGCC TTTCTTTGCCACGAA Nham_3291 3630226 - 3629834 - | hypothetical protein Nham_3292 3632541 - 3630226 - | TonB-dependent siderophore receptor TERM 3305 3632675 - 3632698 + H 70 -2.2 -4.8269 | overlap 3632677 3632677 ATATTCGCTTGAACG TCGGCGCCAG CTTC CGGGCGGCCA TTTTTAATCGTTCTA Nham_3293 3632826 - 3633491 + | two component transcriptional regulator TERM 3306 3634723 - 3634695 - g 72 -7.3 -4.14392 | opp_overlap 3634698, overlap 3634698 TGGCAATTGCGAAAA CCACCGCGGATCG CCA CGACCTGCAGTTG CGTCATGCAAACCGG Nham_3294 3633488 - 3634786 + | periplasmic sensor signal transduction histidine kinase Nham_3295 3636164 - 3634767 - | periplasmic sensor signal transduction histidine kinase Nham_3296 3636839 - 3636165 - | two component transcriptional regulator TERM 3307 3636678 - 3636662 - G 71 -9.3 -3.68351 | CGCGCAGGATCGAAA GCCCGTC GCC GTCGGGC AAACCCAGATCCAGA TERM 3308 3637083 - 3637067 - H 89 -6.5 -5.10461 | TTGAGCCAACAAAAA TCGTCGG TTC CTGACGA GGCAGGCTGCCCGGA TERM 3309 3637813 - 3637796 - g 85 -10.5 -4.37658 | overlap 3637798 AAGCGTTCGAGAAAA CGGGCGC ACTC ACGCCCG ACGCACCCGTGTATG TERM 3310 3638025 - 3637978 - g 70 -9.8 -3.54543 | gap 1, opp_overlap 3637977 3638011 ACCGACGTCGCCAAA GTGCGGATCGGCGAGCGCC-TGA CGT TCACGGTGCTGACCGAGCCGGAC CGTTTGTTCGAGACG Nham_3297 3637138 - 3638394 + | secretion protein HlyD TERM 3311 3640722 - 3640698 - g 80 -14.4 -3.15544 | GGCGACGTCTACGAA TCGGGAAGTG ATCGG CACTTCCCGA TCGTCGTACGGCTGG Nham_3298 3638415 - 3641567 + | heavy metal efflux pump CzcA TERM 3312 3641588 - 3641572 - f 70 -2.1 -4.73682 | overlap 3641574 CGGCAGAATAGAAAA TGGCTCC GGC GGGGCGA TCGTAGAAAAGGACA TERM 3313 3641966 - 3641989 + G 74 -5.2 -4.58283 | gap 1, overlap 3641956 3641967 GAGTCGCGCAGGCTA ACGCGCTG-GT TCA ACGCGGCGCGC TTTTTCCCAGCGTTG TERM 3314 3642365 - 3642321 - g 75 -13.5 -3.06796 | overlap 3642337 CTTGAGGCTATTGAA GCGGCAACAAGAGCAAGGGCA GAT CGCCCTGACCGATGTTGCCGC GCAGGAAACCGCGGT Nham_3299 3641608 - 3643137 + | RND efflux system, outer membrane lipoprotein, NodT TERM 3315 3643193 - 3643211 + T 71 -10.2 -3.58269 | overlap 3643194 GTCCGGACCGGGTCG AGGCCACG CAG CGTGGCCA TTTCCACATCACTTC TERM 3316 3643194 - 3643210 + T 76 -13.7 -2.7464 | overlap 3643193 TCCGGACCGGGTCGA GGCCACG CAG CGTGGCC ATTTCCACATCACTT Nham_3300 3643978 - 3643373 - | hypothetical protein TERM 3317 3644934 - 3644945 + G 81 -7.2 -4.42806 | CTCTGCTCTATGTGC CCGG GCTG CCGG TTTCTTTAGAGCTCC TERM 3318 3644960 - 3644971 + G 88 -4.4 -5.33026 | GTTTCTTTAGAGCTC CAGA GTAT TCTG TTTTTCTTTGCATTC TERM 3319 3645039 - 3645061 + G 100 -7.6 -5.43866 | CCGAATCTCTTCATC GCATTGCGGC TCA GCGGCGGTGC TTTTTTTCGACCTTC TERM 3320 3645664 - 3645678 + G 76 -5.6 -4.61199 | overlap 3645658 3645662 3645660 GGAAAGTATGAGTGG CGATGC CGC GCCTCG TTTTCTATATGCACT Nham_3301 3644576 - 3646264 + | sulfatase Nham_3303 3646633 - 3648042 + | hypothetical protein Nham_3304 3648075 - 3648815 + | hypothetical protein Nham_3305 3649476 - 3649745 + | hypothetical protein Nham_3306 3651488 - 3649923 - | hypothetical protein TERM 3321 3650588 - 3650601 + g 73 -3.1 -4.72986 | GCTTCGCAGCAGCCG GTTCT TCCG AGGAC TTTTTGGTCGACGTA TERM 3322 3652256 - 3652237 - R 93 -7.8 -5.27335 | gap 1 TTCTGGAAACAAAAA GCCCAGCCG CAG CGGC-GAGC CTACCTACCCGACCT Nham_3307 3652951 - 3652661 - | hypothetical protein Nham_3308 3653183 - 3653542 + | PRC-barrel TERM 3323 3653559 - 3653580 + F 100 -18.7 -3.68351 | overlap 3653558 CACTGATAGTTGGTA CCCGCCGGG ATTT CCCGGCGGG TTTCGCTGATCCACG TERM 3324 3653792 - 3653820 + F 93 -8.7 -4.8048 | CCGAACCCCCGATTA GGTCCGCTGCGTC TCC GTTCCAGCGGGCC TTTTTGGTGTAGCCG TERM 3325 3654173 - 3654148 - f 100 -13.3 -5.18726 | CCGTGACAAGAAAAA GGCTCGACATC GTTC GATGTCGGGCC GGTCTGAGGTTTGCC TERM 3326 3654328 - 3654303 - f 90 -10.3 -4.66057 | overlap 3654304 AGAGACAAACGAAAA GGCCCGACGCC ATGA AGCGCCGGGCA AGTTGAGGAGCGGAG TERM 3327 3654327 - 3654304 - f 83 -13.8 -3.38007 | overlap 3654303 GAGACAAACGAAAAG GCCCGACGCC ATGA AGCGCCGGGC AAGTTGAGGAGCGGA TERM 3328 3654815 - 3654797 - f 100 -11.7 -5.4833 | opp_overlap 3654797 3654796 TCAGGCAACAAAAAA GCCCGGT GATCA ACCGGGC CTTTATCGCTGATCA TERM 3329 3654797 - 3654815 + F 71 -11.7 -2.95896 | opp_overlap 3654797, overlap 3654796 TCAGGCAACAAAAAA GCCCGGT GATCA ACCGGGC CTTTATCGCTGATCA Nham_3309 3654969 - 3655220 + | hypothetical protein TERM 3330 3655566 - 3655523 - g 77 -13.2 -3.60627 | gap 1, overlap 3655542 CGACTCCATCTTAAA GCTGCCCGGCGAGATGAAACC GGG AGTATCACC-CACCGGGCAAC CTGGATCATCCGCGA Nham_3311 3655484 - 3656698 + | phage integrase Nham_3312 3656859 - 3657413 + | hypothetical protein TERM 3331 3657453 - 3657428 - f 85 -10.3 -4.35926 | overlap 3657421 3657415 ACGGCAAACGGAAAA GCCCGGCCGCC CTTC GGCAGTCAGGC TAGGATGGAGAGATG Nham_3313 3657775 - 3658596 + | hypothetical protein TERM 3332 3658694 - 3658723 + F 95 -13.5 -4.08394 | gap 1, opp_overlap 3658687 3658686, overlap 3658695 TCTCAAACCCGATTA GGCCCGCCGTGGCG CCC CTTC-CGGCGGGCC TTTTGGCGGCGCTCT TERM 3333 3658917 - 3658907 - f 76 -4.6 -4.72729 | GAACCAAAATCAAAA GCCG GGC CAGC AAGCCGATACTAGGA Nham_3314 3659218 - 3659451 + | hypothetical protein TERM 3334 3659454 - 3659465 + T 79 -7.2 -4.57341 | opp_overlap 3659453 3659439, overlap 3659456 CGAGGTCGCATAACG GCGC TGGA GCGC TTTTTCGCGCCGCTT Nham_3315 3660838 - 3660608 - | hypothetical protein Nham_3316 3661479 - 3661039 - | hypothetical protein Nham_3317 3662243 - 3661479 - | hypothetical protein Nham_3318 3663968 - 3662883 - | phage late control D TERM 3335 3664189 - 3664158 - g 78 -3.6 -5.0538 | gap 1 GCGCAGTTCAAAAAA TGGT-TTCCCCGTGC GAT GCGCGGCGACTACCA GGGACAACGTAACGT Nham_3319 3664017 - 3664421 + | hypothetical protein Nham_3320 3664630 - 3664418 - | phage tail X Nham_3321 3665062 - 3664637 - | phage P2 GpU Nham_3322 3667293 - 3665062 - | Phage tail tape measure protein TP901, core region TERM 3336 3665957 - 3665937 - G 74 -14.7 -2.60212 | overlap 3665908 3665907 3665936 CCAGTATCGCAGAAC GCGCAGCCC GGA AGGCTGCGC CGAAGGGCCAGAGCG Nham_3323 3667846 - 3667550 - | hypothetical protein Nham_3324 3668181 - 3667843 - | hypothetical protein TERM 3337 3667877 - 3667912 + g 100 -12.6 -4.58308 | gap 1 TTTCCGGTGAATGTC CCGTCGATGGCGCTCTG TGG CAGACC-CCAGCGACGG TTTATTTCGTTGATA Nham_3325 3668835 - 3668320 - | phage major tail tube protein TERM 3338 3668900 - 3668883 - R 83 -14.1 -3.05816 | opp_overlap 3668869 GGATGCGGGAGCGAA GGCCGCG CTTA CGCGGCC AGCGACCCGGAGCTG Nham_3326 3670327 - 3668891 - | phage tail sheath protein Nham_3327 3670852 - 3670370 - | hypothetical protein Nham_3328 3672561 - 3670855 - | hypothetical protein TERM 3339 3672831 - 3672817 - R 81 -11.4 -3.90112 | GTGCCGGGAAGGAAA CGTCGG TCG CCGACG ACACAAGGAAAATGG Nham_3329 3675094 - 3672797 - | hypothetical protein Nham_3330 3676359 - 3675091 - | Phage tail protein I Nham_3331 3677267 - 3676356 - | baseplate J-like protein Nham_3332 3677764 - 3677267 - | GPW/gp25 Nham_3333 3678364 - 3677837 - | Phage-related baseplate assembly protein V TERM 3340 3678030 - 3678006 - G 76 -8.5 -4.13767 | overlap 3677991 3677987 3678007 TCGCCCATTTCAAAA CGGGCATCGCC CCT GACGATGACCA GCTCCGGACCGTCAT TERM 3341 3678033 - 3678056 + g 75 -3 -4.82901 | gap 1, overlap 3678034 3678052 CTGACGATGACCAGC TCCG-GACCGT CAT GCGGGCGCGGG TTTTTGTCGGACGGC TERM 3342 3678052 - 3678108 + g 83 -15 -3.53091 | overlap 3678034 3678033 GACCGTCATGCGGGC GCGGGTTTTTGTCGGACGGCGTCGAC ATCTC GATGATGCCGTCCGTCAGGTCCCCGC TTTCCGAGACGACAT Nham_3334 3679152 - 3678460 - | hypothetical protein Nham_3335 3679514 - 3679152 - | hypothetical protein Nham_3336 3679853 - 3679527 - | hypothetical protein TERM 3343 3679890 - 3679913 + r 84 -7.3 -4.82901 | overlap 3679891 3679892 GGAACGGCGAGGAAG GTCCGGCGC TGTTAC GCGCCGGGG TTTTTGTAGCCGAAG TERM 3344 3679891 - 3679912 + r 71 -10.8 -3.49419 | overlap 3679890 3679892 GAACGGCGAGGAAGG TCCGGCGC TGTTAC GCGCCGGG GTTTTTGTAGCCGAA Nham_3337 3683440 - 3679901 - | phage terminase GpA TERM 3345 3681996 - 3682042 + gr 72 -4.2 -4.65895 | overlap 3682013 GTACCCTTGATGCCG TCGATGCCGACGATCCAGAGCG AGC CGCCCTTCGTCTTCGACTTCGA TTTTTCGATCCACGG TERM 3346 3682997 - 3683020 + gr 74 -11 -3.53012 | gap 1, overlap 3683008 AAGCACCCGAACGTT GTGCCGACGCA GAT TGCG-CGGCGC TTTCGCCGCGACCAC Nham_3338 3683948 - 3683400 - | hypothetical protein Nham_3339 3684719 - 3684141 - | hypothetical protein Nham_3340 3684886 - 3685137 + | hypothetical protein Nham_3341 3685185 - 3685385 + | hypothetical protein Nham_3342 3685931 - 3685467 - | hypothetical protein Nham_3343 3686634 - 3686212 - | NusG antitermination factor Nham_3345 3687153 - 3686842 - | hypothetical protein Nham_3346 3687577 - 3687206 - | hypothetical protein Nham_3347 3689133 - 3687586 - | TOPRIM domain-containing protein TERM 3347 3689215 - 3689179 - R 95 -10.2 -4.72029 | gap 1, opp_overlap 3689208, overlap 3689181 TGCAATTGAAGAAAA CACCCTCGCC-GTCGAT CAGC ACCGACAGGCAAGGGTC GCGCTTGTGTTTGCG TERM 3348 3689213 - 3689181 - R 91 -12.8 -3.9716 | gap 1, opp_overlap 3689208, overlap 3689179 CAATTGAAGAAAACA CCCTCGCC-GTCGAT CAGC ACCGACAGGCAAGGG TCGCGCTTGTGTTTG Nham_3348 3690282 - 3689326 - | hypothetical protein Nham_3349 3691063 - 3690671 - | hypothetical protein TERM 3349 3691159 - 3691126 - H 78 -10.9 -3.68073 | overlap 3691127 TACGCTACTGAACAA GCAGCCGCCGTCG ACGCAGAA CCACGGCGGCGGC TGGATACAAAAATGG TERM 3350 3691161 - 3691127 - H 76 -13.4 -2.80522 | overlap 3691126 ACGCTACTGAACAAG CAGCCGCCGTCGACGC AGA ACCACGGCGGCGGCTG GATACAAAAATGGAA Nham_3350 3691459 - 3692013 + | hypothetical protein Nham_3351 3692284 - 3692024 - | hypothetical protein Nham_3352 3692363 - 3693085 + | putative phage repressor Nham_3353 3693102 - 3693371 + | hypothetical protein TERM 3351 3693400 - 3693385 - f 83 -8.2 -4.61199 | opp_overlap 3693385 3693386, overlap 3693386 AGCTCACATAGAAAA CCCCGC CGGA GCGGGA TTCTGTGCTGAGCCG Nham_3354 3693554 - 3693847 + | hypothetical protein TERM 3352 3693940 - 3693955 + T 83 -11.8 -3.92542 | opp_overlap 3693940 TCCCGGAATAGAAAA CCCCGC CGGA GCGGGG TTATTTGGCACTGAG TERM 3353 3693955 - 3693940 - T 100 -11.8 -4.66537 | opp_overlap 3693940 TCCCGGAATAGAAAA CCCCGC CGGA GCGGGG TTATTTGGCACTGAG Nham_3355 3695065 - 3694001 - | hypothetical protein TERM 3354 3694412 - 3694391 - G 75 -4.3 -4.72272 | opp_overlap 3694391, overlap 3694392 TGCGGGCATCAAAAA TGCTGACGC AAAA GCGTTAGCC TCCCTTTCTGCTGAA Nham_3356 3695692 - 3695078 - | hypothetical protein TERM 3355 3695189 - 3695176 - G 86 -6.7 -4.9792 | opp_overlap 3695182 3695186, overlap 3695177 CATTTGAGAGAAAAA TCCGT TCCA ACGGA TCGGTGAAGGTTCCG TERM 3356 3695977 - 3696008 + r 77 -12.3 -3.54146 | opp_overlap 3695973, overlap 3695975 TCCCCCAAGGACTCC GACCCGTCGGTGA TCCCCC TCGCTGGCGGGTC TCTTTGCTTCGGAAC TERM 3357 3696213 - 3696231 + r 100 -13.1 -4.55295 | CCCGGACCCAACTCG GCCCGCC ACCCC GGCGGGC TTTCTTTGTCCAGGA TERM 3358 3696323 - 3696342 + r 100 -9.2 -5.21709 | CCTAACCCCGATTAG GCCCACTG CGTT CAGCGGGC TTTTTTGGTGTGGGA TERM 3359 3696467 - 3696495 + r 100 -11.7 -4.85599 | CGGTCTCCGGCCGGA TCCGCCGGTAC TGCGGGC GCACCGGCGGA TTTTTGTGGAGTGGC Nham_3357 3697204 - 3696965 - | hypothetical protein Nham_3358 3697468 - 3697232 - | hypothetical protein TERM 3360 3698107 - 3698120 + H 72 -6.7 -4.30576 | opp_overlap 3698107 TTATATGTTGACAAA CGGTA ATTC TACCG TTTTACTCCTCCCCA Nham_3359 3698169 - 3698948 + | phage-encoded protein-like Nham_3360 3699118 - 3699537 + | hypothetical protein TERM 3361 3699521 - 3699556 + F 73 -12.6 -2.83403 | opp_overlap 3699519 3699521, overlap 3699520 GAGCGTCGAAGAACA CGAGCGCGATCGTC TAGCCCAT GACGATTGCGCGCG CTTTCATCGAGGACG Nham_3361 3699674 - 3700135 + | hypothetical protein Nham_3362 3700135 - 3700716 + | hypothetical protein Nham_3363 3700716 - 3701084 + | hypothetical protein TERM 3362 3702214 - 3702184 - g 74 -2.4 -4.91987 | overlap 3702185 AAGGCAAGAAGAAAA CGAACAAGCGCCAG CCG CCAGCTCCCGTTCC GACAAGACTTCTGGC Nham_3365 3701379 - 3702617 + | phage integrase TERM 3363 3702807 - 3702839 + T 100 -23.5 -2.62184 | overlap 3702812 CTGCGACCGCGATGC GGAGATGCGCGCAGG GGG CCAGCGCGCATCTCC TCCTGTCCGCGACCG TERM 3364 3702812 - 3702834 + T 80 -14.8 -2.84634 | overlap 3702807 ACCGCGATGCGGAGA TGCGCGCAGG GGG CCAGCGCGCA TCTCCTCCTGTCCGC Nham_3366 3705114 - 3702988 - | TonB-dependent receptor TERM 3365 3705339 - 3705317 - H 82 -14.2 -2.90075 | overlap 3705319 CCTTTGCTAACCATA CACCGGGCAA ATT TTGCCCAGTG GAATCCGGGTGAAGT TERM 3366 3706589 - 3706538 - g 95 -20.6 -3.17075 | overlap 3706508 3706509 GGCTGCGGAAGCCAA GGCCGCGGCAGCGCCCGACGCCGC AACA GCAGCGGCGGCCGCGGCCGCTGCG GAGGAGCCGATCTCG flhA 3705390 - 3707627 + | flagellar biosynthesis protein FlhA Nham_3368 3707950 - 3708150 + | hypothetical protein TERM 3367 3708247 - 3708275 + T 100 -14.7 -4.27259 | opp_overlap 3708252, overlap 3708252 AAGTGGTCTACGATG GAAAACGCCCG CCCCCCA CGGGCGTTTTC TTTTGCCTATCTCTC TERM 3368 3708252 - 3708270 + T 100 -8.8 -5.11836 | opp_overlap 3708252, overlap 3708247 GTCTACGATGGAAAA CGCCCG CCCCCCA CGGGCG TTTTCTTTTGCCTAT TERM 3369 3708270 - 3708252 - T 80 -9.5 -4.21194 | opp_overlap 3708252 3708247 GTCTACGATGGAAAA CGCCCGC CCCCC ACGGGCG TTTTCTTTTGCCTAT TERM 3370 3708320 - 3708302 - T 85 -2.2 -5.61881 | opp_overlap 3708302, overlap 3708303 TCTCAAAAAGAAAAA CCCGGGCG GAA CGCTTGGA TTCGATGGATATGAA TERM 3371 3708371 - 3708418 + T 91 -17.9 -3.06815 | overlap 3708384 CGATGACGCCCATGC GCGCCCGC-ATCAGGCCGATGCT GTCG AG-ATCGGCTTGCTCGCGGGCGC TCTCTTCCGCACGCT Nham_3369 3708770 - 3708351 - | flagellar export FliJ TERM 3372 3708624 - 3708601 - G 75 -11.8 -3.63627 | gap 1, opp_overlap 3708596 3708595 GTCGGATAGGCGAAA TGCGCGGGATC GTC GATCCCG-GCA CGATCCTGCTCGATT fliI 3710244 - 3708880 - | flagellum-specific ATP synthase Nham_3371 3710578 - 3711279 + | two component transcriptional regulator TERM 3373 3711310 - 3711329 + T 100 -12.8 -5.27335 | TTCCTCCCAGACTGA CCCCGCCG CAAA TGGCGGGG TTTTTGTTTGGGGAG Nham_3372 3712308 - 3711442 - | MCP methyltransferase, CheR-type TERM 3374 3711590 - 3711608 + g 71 -8.8 -3.93288 | overlap 3711562 3711591 GCGGCGCCGAGCGTG AGGAAGCC ATC GGCTTCCA TTTGCTTCGCTAGCC Nham_3373 3713450 - 3712305 - | chemotaxis-specific methylesterase Nham_3374 3713893 - 3713528 - | response regulator receiver domain-containing protein Nham_3375 3714436 - 3713966 - | CheW protein TERM 3375 3714305 - 3714275 - G 70 -11.7 -3.1247 | overlap 3714277 ACCGCGCAGATTCAA GACGCCGGCGACG TCGCC CGACGCCAGCGGC ACCCGGGTCAGACGT TERM 3376 3714303 - 3714277 - G 73 -12.9 -3.12327 | overlap 3714275 CGCGCAGATTCAAGA CGCCGGCGACG TCGCC CGACGCCAGCG GCACCCGGGTCAGAC Nham_3376 3717183 - 3714448 - | CheA signal transduction histidine kinase TERM 3377 3715941 - 3715960 + g 71 -11.4 -3.43564 | TCATCTTCTCGAGTT CGGTCTCG GTCG CGAGGCCG TTCTGGATTGCCTTG Nham_3377 3718145 - 3717498 - | hypothetical protein TERM 3378 3718819 - 3718850 + G 80 -14.4 -3.14132 | opp_overlap 3718807 GGATTGCCGCCGTCA GCCGTTCGCACGGC GACA GCCGTTCGAACGCC TTCATCGACAGCCGG Nham_3378 3718239 - 3719114 + | 3'(2'),5'-bisphosphate nucleotidase Nham_3379 3719808 - 3719236 - | hypothetical protein Nham_3380 3719857 - 3720489 + | hypothetical protein Nham_3381 3720735 - 3721994 + | hypothetical protein Nham_3382 3722508 - 3722251 - | hypothetical protein Nham_3383 3723330 - 3722644 - | hypothetical protein Nham_3384 3724942 - 3723395 - | hypothetical protein TERM 3379 3723927 - 3723951 + g 74 -10 -3.67989 | GCGATGGACGCGTGG TTGAGTGGCC CCGCC GGCCACGCAA TTTCCATCGGCTTTT TERM 3380 3724220 - 3724238 + g 77 -13.8 -3.39327 | opp_overlap 3724211 3724212 GGAAAAGCGGCCGCG CCCGCGCG CCA TGCGCGGG TTATAGGTCTGGCCC Nham_3385 3725183 - 3725746 + | ErfK/YbiS/YcfS/YnhG TERM 3381 3725879 - 3725829 - f 100 -25.8 -4.54727 | overlap 3725823 CGCGTCAAATCAAAA TCCTTGAGCCTTTTCGCATCTGAT GGA ATCAGAAGAGAAAAGGCTCAAGGA GGGGGCAGCGGAACG TERM 3382 3726587 - 3726569 - g 70 -12.4 -3.18264 | opp_overlap 3726562 GCTGGGACCGATCAA CGACACCG ATT CGGTGCCG TGGACCATGTTCAAC Nham_3386 3725964 - 3726776 + | hypothetical protein TERM 3383 3726819 - 3726790 - T 72 -9.3 -3.6869 | gap 1, opp_overlap 3726788 GATACGAATTGCAAA GCCGGGTGCGAACG TTG CGTT-GCATCCGAC CGGCTTTTGCTCTCA Nham_3387 3728157 - 3726982 - | isovaleryl-CoA dehydrogenase TERM 3384 3728175 - 3728195 + r 78 -8.9 -4.15044 | GAAGCCTCCCGTGGT CGCGACCGG AGA CCGATCGTG TTTATTCCAGGAGCG Nham_3388 3729019 - 3728345 - | Hly-III related proteins TERM 3385 3728591 - 3728575 - G 70 -10.1 -3.65656 | overlap 3728578 TCACCAGATAGAGAA CGACCGA CAG CCGGTCG AACCGGCCCGGCAGA TERM 3386 3729544 - 3729511 - g 70 -11.7 -3.16033 | gap 1, overlap 3729508 3729509 CAACTATGAAAATCA CGTCCAGACGCTGATC GCG GATCGGCG-CTGGCCG AACTCGACGGTCGAT TERM 3387 3729998 - 3730039 + G 83 -7.9 -4.58395 | gap 1, opp_overlap 3730021, overlap 3730009 CTATGGACGATGATG CGGCGGCGCTACGAGG-CCT ACA AGGACCTCGTGGTTCGACCG TTTTTCCGCGATCAC Nham_3389 3729236 - 3730705 + | protein of unknown function DUF463, YcjX-like protein TERM 3388 3731221 - 3731205 - g 71 -11.5 -3.40403 | GCTCGCCCACGACAA CCCGCAC CTT GCGCGGG CGCGGGCCACGCTGC Nham_3390 3730702 - 3731748 + | hypothetical protein Nham_3391 3732974 - 3731865 - | transposase, IS4 Nham_3392 3734846 - 3733185 - | glycosyl transferase family protein TERM 3389 3735040 - 3735059 + G 73 -8.6 -4.07568 | gap 1 TTGTCGGTTAGCCCC GCCGGATTC TTC GAA-CCGGC TTTTCAAAGCAAGCG TERM 3390 3735149 - 3735161 + G 74 -6.2 -4.41348 | overlap 3735148 CCCGATTTGAACCCC GCGC ATCAC GCGC TTTATTTAAGGAGAA Nham_3393 3735005 - 3735433 + | hypothetical protein TERM 3391 3735463 - 3735485 + F 100 -18.4 -4.42386 | opp_overlap 3735463 CTCTCGATCGCAAAA CCCCGGCTGC CCA GCGGCCGGGG TTTTGTCCGTCGGCA TERM 3392 3735485 - 3735463 - f 100 -16.2 -4.13767 | opp_overlap 3735463 CTCTCGATCGCAAAA CCCCGGCTGC CCA GCGGCCGGGG TTTTGTCCGTCGGCA TERM 3393 3735664 - 3735651 - f 82 -6.7 -4.72272 | GGCCTCGACCAAAAA GCTTC GGAG GAAGC CATGCTCGACAGACG TERM 3394 3735728 - 3735693 - g 81 -13.8 -3.60234 | opp_overlap 3735699 3735699, overlap 3735694 CGAGAGATGCTGAAA CGCGTCGGCGCCGGAC TGGC GCTCGGCGCCGCCGCC AGCCTGCCCCCTTTC TERM 3395 3735727 - 3735694 - g 84 -17.3 -2.75819 | opp_overlap 3735699 3735699, overlap 3735693 GAGAGATGCTGAAAC GCGTCGGCGCCGGAC TGGC GCTCGGCGCCGCCGC CAGCCTGCCCCCTTT TERM 3396 3736593 - 3736559 - g 70 -12 -3.21099 | CTCCTTCATCACCAA TGTCGCCGATGGCGCG AAA CTCGCGACCGGCGGCA AGCTCCTGAAGGGGA Nham_3394 3735666 - 3736874 + | twin-arginine translocation pathway signal Nham_3395 3736886 - 3737218 + | cytochrome c oxidoreductase subunit B Nham_3396 3737648 - 3737848 + | cold-shock DNA-binding domain-containing protein Nham_3397 3738751 - 3738065 - | hypothetical protein TERM 3397 3738862 - 3738811 - H 72 -8.7 -3.85698 | gap 1, opp_overlap 3738821 GTTTGGTTGGAGAAA GGGTCGCACGGCCGCAACA-GCAT TTCAG ATTCGTGTCGCGCGCGTGCGATCC ACATGACAGTTCTCA Nham_3398 3738865 - 3741918 + | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase Nham_3399 3743157 - 3742114 - | hypothetical protein TERM 3398 3743422 - 3743467 + r 100 -11.4 -4.98531 | gap 3, opp_overlap 3743407 3743450, overlap 3743407 3743424 3743432 GGCTTGGGTGGCGCC CCCAGAGCCTTTCCGCTTCTGAT AAA ATCAGAAGCGG---GGCTCTGTG TTTTTGATTTGCCGC TERM 3399 3743424 - 3743465 + r 93 -12.6 -4.11472 | gap 3, opp_overlap 3743407 3743450, overlap 3743407 3743422 3743432 CTTGGGTGGCGCCCC CAGAGCCTTTCCGCTTCTGAT AAA ATCAGAAGCGG---GGCTCTG TGTTTTTGATTTGCC TERM 3400 3743432 - 3743460 + r 78 -14.7 -2.60234 | opp_overlap 3743450, overlap 3743424 3743422 GCGCCCCCAGAGCCT TTCCGCTTCTGAT AAA ATCAGAAGCGGGG CTCTGTGTTTTTGAT Nham_3400 3744022 - 3743525 - | hypothetical protein Nham_3401 3744891 - 3744025 - | hypothetical protein Nham_3402 3745524 - 3744913 - | hypothetical protein TERM 3401 3745212 - 3745197 - G 71 -6 -4.30576 | overlap 3745198 CGGTGACGACCAAAA GGCGCG ACAG CGCGCT GGAGAGTTCGCCCTG TERM 3402 3745595 - 3745569 - H 100 -11.5 -5.06414 | overlap 3745552 GCGTTTTAAGAAAAA GCCGCGCGACC TCTTC GGCCGCGCAAC CGGAAGAGTAGCAGA Nham_3403 3745695 - 3746999 + | nicotinate phosphoribosyltransferase Nham_3404 3748237 - 3747017 - | hypothetical protein TERM 3403 3747081 - 3747069 - G 82 -3.3 -5.19212 | overlap 3747073 AGCATCACGAAAAAA CCGAC GAC GTAGG CGACCGCGATGGGCC TERM 3404 3747462 - 3747445 - G 83 -9.1 -4.25283 | overlap 3747431 ACGCCGTCAGCAAAA TCGCCGC CCAG ACGGCGA GCCCGAGCACGGGGA TERM 3405 3747929 - 3747892 - G 89 -11.3 -4.33274 | TCGACAGCACGAAAA CGATGACGAGAAGGACG GCAC CGCCTTTCCAGTCATCG GGCAACAGGGCCGGC Nham_3405 3748981 - 3748439 - | flavin reductase-like, FMN-binding Nham_3406 3750220 - 3748991 - | Acyl-CoA dehydrogenase TERM 3406 3750522 - 3750506 - H 75 -12.3 -3.30124 | opp_overlap 3750505 3750506 3750508 CGGCACCGGCGACAA CAGCCTC CGC GAGGCTG GTTTGCTGCGATTAT TERM 3407 3750506 - 3750522 + H 70 -12.3 -2.85841 | opp_overlap 3750506, overlap 3750505 3750508 CGGCACCGGCGACAA CAGCCTC CGC GAGGCTG GTTTGCTGCGATTAT TERM 3408 3750838 - 3750795 - g 81 -13.6 -3.57144 | opp_overlap 3750817, overlap 3750796 GCCGGGAGTGCCAAA CCGGCAAGCCCGGCTGCCGC ACCT GCGGCGGCCGCGCCGGCTGA AGATCTGCCGTCGGT TERM 3409 3750837 - 3750796 - g 75 -14.9 -2.74144 | opp_overlap 3750817, overlap 3750795 CCGGGAGTGCCAAAC CGGCAAGCCCGGCTGCCGC ACCT GCGGCGGCCGCGCCGGCTG AAGATCTGCCGTCGG TERM 3410 3750817 - 3750866 + G 78 -11.9 -3.72576 | opp_overlap 3750796 3750795 GCCCGGCTGCCGCAC CTGCGGCGGCCGCGCCGGCTGAA GATC TGCCGTCGGTTCCGGCGCCGCAG TTTCCTCAAGCACAG Nham_3407 3750696 - 3753194 + | MscS mechanosensitive ion channel Nham_3408 3753281 - 3753523 + | hypothetical protein TERM 3411 3753728 - 3753675 - g 76 -6.7 -4.49556 | gap 3, overlap 3753676 CGTCGATGAAATAAA CCG-CA-TCT-GCCGCCAGGCGGCGG TGGCG CGGCAGACCGGCGGCAAGAATGGCGG CGGCGCGGTCCTGAC Nham_3409 3753520 - 3753870 + | ModE family transcriptional regulator TERM 3412 3754168 - 3754155 - g 71 -9.5 -3.75153 | opp_overlap 3754149 CGGTCTGAACGCAAA CGGCC ACCG GGCCG TGGGCATCGTTCAGC Nham_3410 3754057 - 3754617 + | hypothetical protein TERM 3413 3755918 - 3755928 + G 71 -4.6 -4.41348 | TGCCTCGGCCCATTC GCTG ACC CGGC TTTATTTCGCGACCG Nham_3411 3754731 - 3756308 + | FGGY-family pentulose kinase Nham_3412 3758237 - 3756537 - | hypothetical protein TERM 3414 3757628 - 3757605 - G 72 -3.8 -4.5954 | gap 1, overlap 3757606 3757607 CGATACCATATAAAA CGCCG-AACCC TTG GGGTTACGGAA CCGGCCGGGATTGGT TERM 3415 3757860 - 3757874 + g 71 -8.5 -3.87149 | GGCGACGAAGTTGCC CGGCC CCGGC GGCCG TTTCGGTTTGGTCGC TERM 3416 3758106 - 3758091 - G 83 -5.4 -5.00616 | gap 1, opp_overlap 3758091, overlap 3758075 3758074 CTGCGGCTGAAAAAA TCC-GCC ACG GGCCGGA TTCATGAGATCGCGG TERM 3417 3758297 - 3758276 - H 76 -7.2 -4.46155 | opp_overlap 3758276 3758275 CATATATTTACAAAA GTTCGCCG GAGGCG CGGCGGAC CTTATCGTTAATGGA TERM 3418 3759331 - 3759299 - g 78 -4.8 -4.77036 | gap 1, opp_overlap 3759308 TGTCATGACCAAAAA CCCG-AAGACGATCG GACG CGACCTTCTGGCGGG CGAGGTACTGGAAAT TERM 3419 3759426 - 3759395 - g 72 -3.7 -4.62783 | gap 1 GACCGACGGGAAAAA GCCGGTCG-GCA TCGTGCATC TGCACGACCTGC TGCGCGCAGGCGTAG Nham_3413 3758469 - 3759446 + | KpsF/GutQ family protein Nham_3414 3759523 - 3760632 + | transposase, IS4 TERM 3420 3760870 - 3760842 - T 79 -13.3 -3.12207 | overlap 3760840 AATCAAAATCATAGA TCCCGCTTCTGAT TCC ATCAGAAGCGAAA AGGCTCCAGACTAAA hemH 3761918 - 3760881 - | ferrochelatase TERM 3421 3761872 - 3761852 - G 73 -6.8 -4.3129 | gap 1, overlap 3761853 3761854 GATTGACCAGCAAAA CGCCGACGC GTTC GCG-CGACG CACCCGCCGGGCTCC TERM 3422 3762347 - 3762364 + G 75 -4.1 -4.71426 | TCTGGAGCATCGGCT TTGCGAT CAAC ACCGCAA TTTTCTTCCTGCCGG Nham_3416 3762007 - 3762402 + | hypothetical protein TERM 3423 3762525 - 3762467 - T 74 -13.3 -2.61681 | gap 3, opp_overlap 3762479, overlap 3762438 3762466 3762470 GTCGAATTCCAGAAC GAAGCGCC-CTACGCCGCCTGCG-GCTC TTCGAC GAGCCCGC-GACGGCGCAACAGCGCCTC CGGTTCCGGCTTGCG TERM 3424 3762522 - 3762470 - T 73 -11.4 -3.45832 | gap 3, opp_overlap 3762479, overlap 3762466 3762467 GAATTCCAGAACGAA GCGCC-CTACGCCGCCTGCG-GCTC TTCGAC GAGCCCGC-GACGGCGCAACAGCGC CTCCGGTTCCGGCTT Nham_3417 3764565 - 3762475 - | peptidyl-dipeptidase Dcp TERM 3425 3762987 - 3763003 + g 76 -13.7 -3.14051 | overlap 3762985 AGTGCTTTGCGAATT GCCGCAG AAC CTGCGGC TGTTCCTGCCAGTGC TERM 3426 3764664 - 3764677 + H 71 -8.1 -4.08692 | AAGGCCTTTGGCGCT TGCCG TGGC CGGCA TTTTCGGAGAGATTG Nham_3418 3764717 - 3764977 + | hypothetical protein Nham_3419 3765653 - 3766795 + | ornithine decarboxylase TERM 3427 3767502 - 3767468 - g 73 -11.5 -3.65351 | overlap 3767473 3767488 GCACCGGCAGCGAAA GGACA-CGGCGAGCGGA CAA TCCGCTGGCCGATG-CC GCACGCGGCGTGAAC TERM 3428 3767497 - 3767473 - g 81 -15.7 -3.02324 | overlap 3767468 3767488 GGCAGCGAAAGGACA CGGCGAGCGGA CAA TCCGCTGGCCG ATGCCGCACGCGGCG Nham_3420 3766913 - 3767515 + | GCN5-related N-acetyltransferase TERM 3429 3767835 - 3767867 + F 77 -13.4 -2.91681 | gap 1, opp_overlap 3767832 TCAAGCAGGAAGGTG ACCCGGACGGACGCG CATC CGTG-CCGTCCGGGA TATATCAAGTTCGAC TERM 3430 3768129 - 3768110 - g 72 -4.2 -4.65895 | opp_overlap 3768112, overlap 3768112 GCCGCGATGGAAAAA TATCCCGC GACG GCGGAATT TCTCGCCCGGGAAAT Nham_3421 3768014 - 3768439 + | GreA/GreB family elongation factor TERM 3431 3768449 - 3768482 + F 100 -18.9 -3.17392 | opp_overlap 3768442 3768440 3768439 3768437 AAATAGTAGCGACGA CGTGCTTGCCTCCGC GCAG GCGGGGACAAGCACG TTACGTTAGAAAATA TERM 3432 3768528 - 3768570 + F 100 -9.3 -5.18726 | gap 2, opp_overlap 3768535 3768538 3768558, overlap 3768522 TGCTTTGCACCGGTC GCCAGAATCACCGGCTTTGAT GGC ATCAAAGCCGG-G-TTCCAGC TTTTTGTTCTGACGC TERM 3433 3768562 - 3768538 - f 89 -17.3 -2.82623 | opp_overlap 3768522 3768528, overlap 3768535 3768558 CGGTCGCCAGAATCA CCGGCTTTGAT GGC ATCAAAGCCGG GTTCCAGCTTTTTGT Nham_3422 3768687 - 3769628 + | cation diffusion facilitator family transporter TERM 3434 3770972 - 3770962 - g 73 -6.8 -4.25104 | TGCGCCGTATCAAAA TGCC ACC GGCA TGCAGGTATCGTCGG Nham_3423 3769778 - 3771211 + | homospermidine synthase TERM 3435 3771335 - 3771295 - T 100 -18.5 -3.40299 | overlap 3771296 3771328 CTATCACAGGGATAA GGCTAGAGTCTGATTCAAC GAA GTTGGATCAGACTCTAGCA GACTCTAGAGATCCA TERM 3436 3771334 - 3771296 - T 100 -22 -2.63858 | overlap 3771295 3771328 TATCACAGGGATAAG GCTAGAGTCTGATTCAAC GAA GTTGGATCAGACTCTAGC AGACTCTAGAGATCC Nham_3424 3772356 - 3771340 - | hypothetical protein TERM 3437 3771928 - 3771952 + g 74 -12.1 -3.41527 | opp_overlap 3771921 AAACGCAAGTCCTCC GACGCTCGAGG GCG CTTCGAGCGAC TTGTCCTCACCCTTG Nham_3425 3773441 - 3772356 - | cobalamin synthesis protein, P47K Nham_3426 3774514 - 3773573 - | periplasmic solute binding protein TERM 3438 3773635 - 3773645 + g 79 -8.2 -4.2828 | overlap 3773634 TGTCAATGTAAGTGG GGGC ATC GCCC TTTTCGTCACTCAAA TERM 3439 3774015 - 3774001 - G 71 -8.5 -3.85698 | CGTTGGCCCGATAAA CCGCC TCGCC GGCGG GGTCGGCCGCAATCA Nham_3427 3775380 - 3774511 - | hypothetical protein TERM 3440 3774864 - 3774826 - G 71 -8.7 -3.88291 | gap 1 GATCAGCGCCAGAAA CGCCAGATGCGCCGGCGC GCCG GCGC-GGCTCACCGTGCG CAGAAACAATGGATC TERM 3441 3775305 - 3775276 - G 100 -9.9 -4.77036 | gap 1, opp_overlap 3775291, overlap 3775278 CCGCAGCATCAAAAA CACGCCGATCGGCG CGG CGCCGAGCG-CGAG CGCAATCGCCGCCGC TERM 3442 3775332 - 3775278 - G 83 -11.9 -4.00443 | gap 1, opp_overlap 3775291, overlap 3775276 GCAGCATCAAAAACA CGCCGATCGGC-GCGGCGCCGAGCGC GAGC GCAATCGCCGCCGCCAGCGCACGGCG CATGAATTCGAAATC Nham_3428 3776146 - 3775388 - | ABC transporter related TERM 3443 3775724 - 3775763 + g 81 -9.9 -4.15453 | opp_overlap 3775723 CCGTGCGAACAGCAT CCGTTGCATCTGCCCGC CCGACA GCGTGCCGATGGGACGG TTTTCGAATCCGTTG Nham_3429 3776390 - 3776148 - | hypothetical protein TERM 3444 3776501 - 3776447 - R 79 -12.7 -3.32844 | gap 1, overlap 3776429 GTGTCCAGCGGACAA CCGCCTCCGCGACCCGAGGCGCGTCC AACC GCCCCCGCCTCAGGTCA-GATGGCGG ACCAGCGCGAGACCG Nham_3430 3776860 - 3776486 - | crcB protein TERM 3445 3776960 - 3776927 - H 81 -14.9 -2.64375 | gap 1, opp_overlap 3776924 AAAACCGTTAGATCA CGATGATTTTGGATCG ACT CGATCCAAAATCAT-G AACGTGATCGATTCC TERM 3446 3777085 - 3777104 + G 100 -15 -4.81249 | opp_overlap 3777085 GGGCCGACGAAAAAA GGCGGCAC CGTC GTGCCGCC TTTTTGAGTTTCCAC TERM 3447 3777104 - 3777085 - g 100 -15 -5.14563 | opp_overlap 3777085 GGGCCGACGAAAAAA GGCGGCAC CGTC GTGCCGCC TTTTTGAGTTTCCAC Nham_3431 3776958 - 3777170 + | hypothetical protein Nham_3432 3777736 - 3777137 - | superoxide dismutase Nham_3433 3778099 - 3778536 + | hypothetical protein TERM 3448 3778574 - 3778623 + T 73 -3.5 -4.86731 | gap 1, opp_overlap 3778589 3778592, overlap 3778589 3778590 CTTTGGAGTCTTTTC CGCTTCTGATAGAATTCA-GGAGC GAG GCTCCATGGTTTTGATCTGGCGCG TTTTCTTTACGCGAA Nham_3434 3781204 - 3778703 - | heavy metal translocating P-type ATPase TERM 3449 3779406 - 3779384 - G 72 -4.1 -4.62069 | overlap 3779387 GCGCGATTCCAAAAA CAATGCCGA ACCGA TCAGCACCG CCCTGCCCTCGACCT TERM 3450 3781130 - 3781166 + g 70 -7.4 -3.99805 | overlap 3781131 3781132 TGATGCGCGGGCGGA TGA-TGCGGGCTGCGC CTCGGCC GCGCAGCC-GCAGTCG TTTCCATTTTTGGAC Nham_3435 3781260 - 3781535 + | hypothetical protein TERM 3451 3781596 - 3781607 + T 71 -7.2 -4.18018 | opp_overlap 3781584 ACAGGCGATCATCAT CGCC GACC GGCG TTTTCCATGACCGGG Nham_3436 3782350 - 3782141 - | cold-shock DNA-binding domain-containing protein TERM 3452 3782412 - 3782379 - R 100 -16.7 -5.02323 | opp_overlap 3782377 3782374, overlap 3782380 3782381 TCATCATAAAGAAAA GCCCGCGCTGTCCAC CCAG GCGGACAGCGCGGAA AGTTCTGGTTGGGAA TERM 3453 3782411 - 3782380 - R 100 -20.2 -3.60309 | opp_overlap 3782377 3782374, overlap 3782379 3782381 CATCATAAAGAAAAG CCCGCGCTGTCCAC CCAG GCGGACAGCGCGGA AAGTTCTGGTTGGGA TERM 3454 3782410 - 3782381 - R 100 -21.5 -2.75101 | opp_overlap 3782377 3782374, overlap 3782380 3782379 ATCATAAAGAAAAGC CCGCGCTGTCCAC CCAG GCGGACAGCGCGG AAAGTTCTGGTTGGG Nham_3437 3782976 - 3782446 - | ISSpo6, transposase OrfB TERM 3455 3782640 - 3782664 + g 76 -5.5 -4.63542 | opp_overlap 3782637 3782635 3782640, overlap 3782656 3782662 GCGGCAGGAACAGGA GCCACGCGCCC CGT GCGCGGATGGC TTTTTCGGCCTTCTC Nham_3438 3783400 - 3783023 - | ISSpo6, transposase orf A TERM 3456 3783769 - 3783743 - R 70 -2.1 -4.77438 | opp_overlap 3783760, overlap 3783750 ATGGAGCACCAAAAA GCGAAAACCGG AGGAA CCGCGTGTCGC AATTCTCACCGGAAT TERM 3457 3783781 - 3783750 - R 85 -9.4 -4.49644 | gap 1, opp_overlap 3783760, overlap 3783743 ACCAAAAAGCGAAAA CCGGAG-GAACCGCG TGT CGCAATTCTCACCGG AATTTATCCGAACAC Nham_3439 3786083 - 3784284 - | ATP-dependent DNA helicase RecQ TERM 3458 3785618 - 3785595 - G 71 -11 -3.53012 | CGGCGTGTCGGGAAA CAGCCCGACA AGGG CGTCGAGCTG GCGGTAGGAAGGGCG TERM 3459 3785990 - 3785979 - G 72 -7.2 -4.23674 | CGGCATCAACACAAA GGCG TTGT CGCC GCCAATGACATGCGC TERM 3460 3786745 - 3786717 - R 100 -20.5 -4.64383 | opp_overlap 3786711 AACCAGAAAGCAAAA GCCCCTGAAAACA TCA TGTTTTCAGGGGC TTAGCGACTGGTTGC TERM 3461 3786949 - 3786939 - R 74 -6.8 -4.26903 | GCGACCCGAGCAAAA CGCT CGC AGCG CGAAACGTATGTACC Nham_3440 3788395 - 3787286 - | transposase, IS4 Nham_3441 3788717 - 3788472 - | hypothetical protein TERM 3462 3789342 - 3789306 - R 88 -15.1 -3.49475 | overlap 3789319 3789322 CCCACCCTCACATAA GGCTGGCGCAAAACCAC CCG ATGGCGTAGCGCCAGCC GCACCGTTTCTTGCG Nham_3443 3791180 - 3790107 - | C4-dicarboxylate transporter/malic acid transport protein TERM 3463 3791215 - 3791252 + r 79 -13.3 -3.05384 | opp_overlap 3791209 GCTTAAGCACCGCTG GCGGCGCTACCACCCCG TCGC CAGGGCGGTAGCGATGC TTGAATAGACCGACA TERM 3464 3791321 - 3791336 + r 71 -6.8 -4.19817 | overlap 3791322 CGGGAGCGACTGCAA TCGCTC CATG GAGCGG TTTTGCATCCCTGAA Nham_3444 3792551 - 3791298 - | major facilitator transporter TERM 3465 3791472 - 3791492 + g 79 -13.9 -3.53091 | CGCAGTCATCGTGAA GCCGCAGGC CGC GCCGGCGGC TTTCGCCAAGCCGCT TERM 3466 3791781 - 3791763 - G 71 -5.9 -4.3739 | CACTGGGGTATAAAA CGCGACC GCGCT GGTTGCG TCCACATGCCAATAG TERM 3467 3792727 - 3792764 + r 84 -14.9 -3.01712 | gap 1, opp_overlap 3792729 3792732 TCTCTACTGTCGCAC AACAC-TCGCCGGCGAGT AAA ACTCGCCGGCGATGTGCA TGTTAAACACCACAC TERM 3468 3792762 - 3792729 - R 100 -21.9 -3.29511 | gap 1, opp_overlap 3792727, overlap 3792732 TCTACTGTCGCACAA CAC-TCGCCGGCGAGT AAA ACTCGCCGGCGATGTG CATGTTAAACACCAC TERM 3469 3792758 - 3792732 - R 100 -22.4 -2.52742 | opp_overlap 3792727, overlap 3792729 ACTGTCGCACAACAC TCGCCGGCGAGT AAA ACTCGCCGGCGA TGTGCATGTTAAACA Nham_3445 3793493 - 3792816 - | nitrate reductase, gamma subunit Nham_3446 3794556 - 3793528 - | nitrate reductase molybdenum cofactor assembly chaperone TERM 3470 3794628 - 3794654 + r 84 -15.2 -2.87931 | overlap 3794624 ATTACGCGAGACCCG GCGGTTGGGTAT ATG AAACCCAACCGC TGTCTCGCGCCTGCA Nham_3447 3796228 - 3794687 - | nitrate reductase, beta subunit Nham_3448 3796978 - 3796295 - | peptidylprolyl isomerase, FKBP-type TERM 3471 3796894 - 3796927 + g 76 -13.8 -3.24902 | ATTTCCCGACGCTAA CCCGCTCAGGCGCA CCGAAA TGCGCCGGAGCCGG TTCATGATCATGTTC Nham_3449 3800616 - 3796972 - | nitrate reductase, alpha subunit TERM 3472 3800044 - 3800020 - G 74 -12.9 -3.31792 | overlap 3800033 GTACCAGTCGTAGAA GCTCATGAGCG AAC CGCCCATAAGC GACAAAAAGCGTGTG Nham_3450 3801596 - 3800616 - | cytochrome c, class I TERM 3473 3802368 - 3802389 + G 75 -2.9 -4.86001 | opp_overlap 3802364, overlap 3802386 GGCAAAAACATCGGA CCGAGCA TTCGCATC TGCCCGG TTTTTATCAACTGGT Nham_3451 3802194 - 3802940 + | hypothetical protein TERM 3474 3802940 - 3802980 + F 74 -11.1 -3.52652 | opp_overlap 3802943 3802946 3802968, overlap 3802963 CGCGCAAGACGACTA GAACCAGCCCGGCTTTGAT GCA ATCAAAGCCGGGCTCCCGC TTCTGATTCCATCGG TERM 3475 3802977 - 3802943 - f 89 -15.8 -3.47307 | opp_overlap 3802940 3802963, overlap 3802946 3802968 GCAAGACGACTAGAA CCAGCCCGGCTTTGAT GCA ATCAAAGCCGGGCTCC CGCTTCTGATTCCAT TERM 3476 3802974 - 3802946 - f 100 -21.9 -2.8751 | opp_overlap 3802940 3802963, overlap 3802943 3802968 AGACGACTAGAACCA GCCCGGCTTTGAT GCA ATCAAAGCCGGGC TCCCGCTTCTGATTC TERM 3477 3804669 - 3804683 + G 77 -2.7 -5.07486 | ATAACGTTCCTCGTA GGCGG CATGA CCGGC TTTTTGTTCGCGGTC Nham_3452 3803496 - 3805472 + | cytochrome-c oxidase Nham_3453 3805469 - 3806086 + | cytochrome o ubiquinol oxidase subunit III Nham_3454 3806088 - 3806429 + | cytochrome C oxidase subunit IV Nham_3455 3807239 - 3807433 + | hypothetical protein Nham_3456 3808551 - 3807802 - | Surfeit locus 1 TERM 3478 3808386 - 3808441 + g 73 -8.9 -4.07568 | gap 2, overlap 3808390 AGTCTGCCAGCGGGG GCAAGGCGCTGGGCGTGGCGGCCAGCC GCTC GG-TGAGCGCCGCGATCAGCGCG-TGC TTTTCGGCGCGGCGC TERM 3479 3808519 - 3808529 + g 74 -2.4 -4.87133 | opp_overlap 3808518 3808514, overlap 3808514 3808513 CGTAAAGAGACCAAG GCCG AGC CCGC TTTTGTTTGCGAGCT Nham_3457 3808937 - 3808548 - | hypothetical protein TERM 3480 3808986 - 3808956 - R 100 -19.1 -3.02263 | opp_overlap 3808956 3808961, overlap 3808961 ACATTCCCCGGAAGA GAAAAGGGCGGCC CCAGC GGCCGCCCTTTCC ATATTTGAGCTGCTT TERM 3481 3808956 - 3808986 + r 85 -16.9 -2.63357 | opp_overlap 3808956 3808961, overlap 3808961 ACATTCCCCGGAAGA GAAAAGGGCGGCC CCAGC GGCCGCCCTTTCC ATATTTGAGCTGCTT TERM 3482 3808961 - 3808981 + r 100 -15.4 -3.81137 | opp_overlap 3808961 3808956, overlap 3808956 CCCCGGAAGAGAAAA GGGCGGCC CCAGC GGCCGCCC TTTCCATATTTGAGC TERM 3483 3808981 - 3808961 - R 100 -15.4 -4.66537 | opp_overlap 3808956 3808961, overlap 3808956 CCCCGGAAGAGAAAA GGGCGGCC CCAGC GGCCGCCC TTTCCATATTTGAGC Nham_3458 3809866 - 3809012 - | cytochrome c oxidase, subunit III TERM 3484 3809594 - 3809576 - G 78 -11.8 -3.7282 | overlap 3809564 3809561 CCAGGCGACGAAGAA CATCACCT CGG AGGTGATG AACAGGATCATGCCG TERM 3485 3809954 - 3809935 - R 88 -5.6 -5.27023 | ATCCCAAAAACAAAA CGCGTCAG CAAC CAAACGCG TCAGCCGTCGAAGGT Nham_3459 3810619 - 3809969 - | cytochrome C oxidase assembly protein TERM 3486 3810393 - 3810409 + g 76 -9.3 -4.09864 | overlap 3810394 GTGCGCGCAAGCGGT GCCGCGC TCG GCGCGAC TTTTGCGACCTGCGT TERM 3487 3810491 - 3810467 - G 72 -12.1 -3.32268 | GAACCAGTTGTAGAA CGGCACCGC GGCGTAG GCGGCGCCG ACCATGAGCGCGACC Nham_3460 3810789 - 3810625 - | CoxF protein TERM 3488 3810701 - 3810736 + g 88 -7.3 -4.84359 | opp_overlap 3810681 3810679, overlap 3810694 3810696 ACCAGGATTCCGAGC GCGCAGGCGATCGCG ATCGAG CGCTCGCGCCGGCGC TTTTTCTGCGCCTCG Nham_3461 3811792 - 3810806 - | protoheme IX farnesyltransferase TERM 3489 3811260 - 3811202 - G 100 -12.2 -4.8083 | overlap 3811205 3811207 GAAGATGATCAAAAA CAGCAGCAGCGGCTCGACCGACAGCGAC CCC GTCGCCGCCGCCCACGCCACCACCGGCG GCAGTGCGCCGGCGG TERM 3490 3811257 - 3811205 - G 78 -14.7 -2.99543 | overlap 3811202 3811207 GATGATCAAAAACAG CAGCAGCGGCTCGACCGACAGCGAC CCC GTCGCCGCCGCCCACGCCACCACCG GCGGCAGTGCGCCGG TERM 3491 3811255 - 3811207 - G 75 -13.7 -3.04018 | overlap 3811205 3811202 TGATCAAAAACAGCA GCAGCGGCTCGACCGACAGCGAC CCC GTCGCCGCCGCCCACGCCACCAC CGGCGGCAGTGCGCC TERM 3492 3811804 - 3811847 + r 81 -15.3 -2.61216 | gap 1, overlap 3811800 3811837 GCATACAGTTCGCTT TGTTG-GGTGCGCGGCGCGC ACCAG GCGCGCCGCGCACAGTCACA TGACTTGCTTACTGC Nham_3462 3813469 - 3811856 - | cytochrome-c oxidase TERM 3493 3813424 - 3813398 - G 74 -10.1 -3.76373 | gap 1, overlap 3813399 GGTCGAATACGCAAA GCGCCGCCACCC GGTC GGGTGGTG-CGC GTGGTCGTCGTCGTG Nham_3463 3814409 - 3813552 - | cytochrome-c oxidase Nham_3464 3815225 - 3815686 + | hypothetical protein Nham_3465 3817021 - 3815753 - | hypothetical protein TERM 3494 3816266 - 3816313 + g 70 -11.9 -3.19192 | opp_overlap 3816262 3816286, overlap 3816252 3816247 TCCGGCGAATACCTT GCCGCGTTCGTTCTGCCAAAG CTCTCC CTCCGGCAGACCAAGCGCGGC TTCGATTGCCTCAAA Nham_3466 3817804 - 3817415 - | hypothetical protein TERM 3495 3818188 - 3818175 - g 81 -6.7 -4.78572 | CTGGAATGAACAAAA CCTCA GCGA TGAGG TGTACATGGAAGCGG Nham_3467 3818080 - 3818352 + | hypothetical protein TERM 3496 3819278 - 3819229 - g 79 -15.1 -2.86343 | ACGCCAAGGATCACA GCCATGGCCACGATCACGACCAT GGCC ACGATCACGATCATGGCAACGGC CATGACCACCATGAT TERM 3497 3819572 - 3819560 - g 71 -4.7 -4.52347 | overlap 3819552 GAAAGAAGACGAAAA GCGCC AAA GTCGC ATCGTTTTCATCGGC Nham_3468 3818574 - 3819641 + | cobalamin synthesis protein, P47K Nham_3469 3820540 - 3820229 - | hypothetical protein Nham_3470 3820924 - 3820727 - | hypothetical protein TERM 3498 3821123 - 3821135 + r 75 -9.1 -4.09243 | overlap 3821124 3821129 GGGTGGCGTCATGTC GCACG TCG CGTGC TTTTCGCAGCGTGTC TERM 3499 3821789 - 3821736 - R 78 -11.2 -3.64198 | opp_overlap 3821740 CGGCCAGACACACAA CGACCGCGGT-AAGCGCTGCCT CGTTTCCGAGAT CGGCA-CGCTTCACCGCGGTCG CAGACGAACACTACT Nham_3471 3822586 - 3821837 - | hypothetical protein Nham_3472 3823017 - 3822733 - | hypothetical protein TERM 3500 3823505 - 3823493 - g 76 -6.3 -4.42386 | overlap 3823496 GTCTGATTTATAAAA TCATC ATC GATGA CGACCGCATGGTCAA Nham_3473 3823294 - 3823701 + | hypothetical protein TERM 3501 3824535 - 3824578 + T 75 -8.9 -4.09739 | gap 3, opp_overlap 3824510 3824507 TTTAACCGCCCCGCC CCCGTGGCGGCAACCGCGAGCG GGA TGCTCGCGA--G-CGCCATGGG TTTTGACAGGCTTAA TERM 3502 3824597 - 3824615 + T 77 -10.3 -3.79747 | TGACAGGCTTAACTT CAGCAGG TCGTT CCTGCTG TTTAGTCATGCCTGC Nham_3474 3825201 - 3824641 - | cytochrome c, class I TERM 3503 3824968 - 3824983 + g 70 -10.4 -3.61398 | ACCGCGCTCGGCATT GGCGCT GGCA AGCGCC TTATTGAACGACGCC TERM 3504 3825254 - 3825239 - R 78 -8.2 -4.47183 | overlap 3825240 GAGGAGCCAAAGAAA CCCGGG ATAC CCCGGA CGAACTGAAAAGATC TERM 3505 3825300 - 3825266 - R 83 -9.3 -4.30014 | gap 1, opp_overlap 3825266 CGGACGAACTGAAAA GATCGATG-GCAGCGG CACC CCCCGGCTCATCGATC TTGTAACAGCCCCAC TERM 3506 3825442 - 3825455 + r 83 -4.5 -5.0916 | gap 1, overlap 3825423 3825423 ACGGTGCCTTTGACA GGCACC CTT GG-GCC TTTTTCTGTTGCGCC Nham_3475 3826916 - 3825651 - | diaminopimelate decarboxylase Nham_3476 3827336 - 3826929 - | hypothetical protein Nham_3477 3828796 - 3827399 - | argininosuccinate lyase TERM 3507 3827440 - 3827459 + g 72 -4.2 -4.57073 | overlap 3827427 GCCGCTTGAGCCAGG CGTTGGCT TGCG AGCGGACG TTTTTCGGCGCGGTC TERM 3508 3829105 - 3829087 - g 72 -4.4 -4.59853 | overlap 3829089 CGAACTCTCCAAAAA GCTCGCCC ACC GGGCCATC GGCGAAGTGGCATCC Nham_3478 3828905 - 3829576 + | thioredoxin-like protein Nham_3479 3830471 - 3829590 - | 3-hydroxybutyryl-CoA dehydrogenase Nham_3480 3831522 - 3830578 - | electron transfer flavoprotein, alpha subunit TERM 3509 3831042 - 3831004 - G 71 -10.9 -3.40382 | gap 2, overlap 3830996 3831005 GACGAAACTCGACAA GC-CCGG-GTCGGCCGCCG CGG CGACGGCCTCCACCGGAGC ACTGCCGCCGTCGCC Nham_3481 3832271 - 3831522 - | electron transfer flavoprotein beta-subunit Nham_3482 3833078 - 3832506 - | ATP--cobalamin adenosyltransferase TERM 3510 3832629 - 3832649 + g 74 -12.5 -3.34043 | GGCATCGTTGACCGA CTCGCCGGG CTG CGCGGCGAG TTCTACCATCATGCG Nham_3483 3833319 - 3833122 - | hypothetical protein Nham_3485 3835541 - 3834285 - | histidine kinase Nham_3484 3833465 - 3834358 + | ribonuclease BN TERM 3511 3834393 - 3834366 - GT 71 -7.7 -3.96327 | gap 1, opp_overlap 3834366 3834382 3834386, overlap 3834367 AGGCTTGACCAGAAA CGCATCGC-CGC CGGCC GCGCGCGATGCC GCTTCGTCGTCGCTT TERM 3512 3834566 - 3834604 + gT 75 -10.3 -3.65812 | gap 1, opp_overlap 3834576, overlap 3834567 3834576 CGGCGTCCTCGCCTC GTC-CGACGAACTCGGCC TGAT GGCCGAGTTCGGTGAGAA TTGTGTTGAGCACGA TERM 3513 3834567 - 3834603 + gT 76 -13.8 -2.79273 | gap 1, opp_overlap 3834576, overlap 3834566 3834576 GGCGTCCTCGCCTCG TC-CGACGAACTCGGCC TGAT GGCCGAGTTCGGTGAGA ATTGTGTTGAGCACG TERM 3514 3834576 - 3834593 + gT 76 -12.7 -3.0701 | opp_overlap 3834576, overlap 3834567 3834566 GCCTCGTCCGACGAA CTCGGCC TGAT GGCCGAG TTCGGTGAGAATTGT TERM 3515 3834593 - 3834576 - GT 76 -12.7 -3.14132 | opp_overlap 3834567 3834566 3834576 GCCTCGTCCGACGAA CTCGGCC TGAT GGCCGAG TTCGGTGAGAATTGT Nham_3486 3836535 - 3835663 - | glutamyl-Q tRNA(Asp) synthetase Nham_3487 3836582 - 3837235 + | HhH-GPD Nham_3488 3837406 - 3838932 + | PAS/PAC sensor hybrid histidine kinase TERM 3516 3839083 - 3839073 - g 73 -8.2 -4.08216 | CTAGCCGCCTCAAAA GCCG AAG CGGC CGACATGGAGATCGG Nham_3489 3838929 - 3839219 + | hypothetical protein TERM 3517 3839636 - 3839620 - g 78 -12.3 -3.75153 | opp_overlap 3839625 TCTGCGCAAGGGAAA CCTGACG CCG CGTCAGG CGGGGATGTTTCCGC Nham_3490 3839216 - 3839773 + | HNH endonuclease Nham_3491 3839907 - 3840878 + | PDZ/DHR/GLGF Nham_3492 3841406 - 3840954 - | BadM/Rrf2 family transcriptional regulator TERM 3518 3841457 - 3841439 - H 70 -4.6 -4.52589 | opp_overlap 3841439, overlap 3841454 GGCCGTCACATAAAA GCTATATT TTA AATATTGC TTTTAGGCAACCGCG Nham_3493 3841701 - 3842123 + | hypothetical protein Nham_3494 3842724 - 3842131 - | DSBA oxidoreductase Nham_3495 3843282 - 3842809 - | hypothetical protein Nham_3496 3843535 - 3843789 + | hypothetical protein Nham_3497 3844476 - 3843904 - | disulphide bond formation protein DsbB TERM 3519 3844412 - 3844424 + g 100 -4.7 -5.40072 | opp_overlap 3844397, overlap 3844413 GCCACGGCCAGCGCC GCGGC GAA GCCGG TTTTTTTGCCGCGGA TERM 3520 3844413 - 3844423 + g 71 -8.2 -3.83561 | opp_overlap 3844397, overlap 3844412 CCACGGCCAGCGCCG CGGC GAA GCCG GTTTTTTTGCCGCGG TERM 3521 3844991 - 3845044 + H 71 -11.6 -3.25823 | opp_overlap 3845037, overlap 3844994 TTTTTTTCAGACATT GGGGCGGGTTGGCCGGGCGAACGC GGATCG GCGTTTGCCCCGATAACCCGGATC TTGGTCTCCGAGACA TERM 3522 3844994 - 3845041 + H 78 -14.1 -2.51547 | opp_overlap 3845037, overlap 3844991 TTTTCAGACATTGGG GCGGGTTGGCCGGGCGAACGC GGATCG GCGTTTGCCCCGATAACCCGG ATCTTGGTCTCCGAG Nham_3498 3845212 - 3845949 + | hypothetical protein Nham_3499 3845897 - 3846436 + | hypothetical protein Nham_3500 3846446 - 3848545 + | TonB-dependent receptor TERM 3523 3848541 - 3848587 + T 76 -7 -4.54727 | gap 4, overlap 3848543 GGCTGGAATATCATT TC-TAGAGCCTTTTCGCTTCTGAT GGA ATCAGAAGCG--A-GGCTCTATGA TTTTGATTTGACGCG Nham_3501 3849351 - 3848761 - | hypothetical protein Nham_3502 3850458 - 3849472 - | alcohol dehydrogenase GroES-like protein TERM 3524 3850104 - 3850147 + g 72 -7.9 -4.11216 | CGTCGCGCGCCGTCA GGCCCGCGGGCAGCGCCAC CAGCCA GTCGCCCTTGACGCGGGCC TTTTCCGCATAGGCC TERM 3525 3850298 - 3850283 - G 72 -7.5 -4.15565 | opp_overlap 3850295 3850297, overlap 3850263 GCGATCATCGGAAAA CGCCG CACCAC CGGCG CCTTGCCAGTGACCG Nham_3503 3851817 - 3850507 - | major facilitator transporter TERM 3526 3851665 - 3851635 - G 75 -3.8 -4.72272 | GGGTTGCATGAAAAA GCCGAAGGCCGAAC GCG GCCCGAACGTCAGC ATCCCGATCAGGCAG TERM 3527 3851813 - 3851768 - G 74 -4.6 -4.65895 | gap 2, opp_overlap 3851748 GTCGCCATCGAAAAA CGTCCATTTGCCGATGCCGACG CACA CGGCGGC-TCGGCCATCAG-CG CCATCCGGCCGGCAT Nham_3504 3853351 - 3851951 - | cell wall hydrolase, SleB TERM 3528 3852434 - 3852466 + g 100 -3.3 -5.98781 | overlap 3852424 CGCTTCGAAATAAAC CGCTTCAGCCAGG CATTTCT CCTGCTTGGCGCG TTTTTTTTCGTTCTG TERM 3529 3852480 - 3852504 + g 93 -13.5 -4.13945 | overlap 3852481 CGTTTTTTTTCGTTC TGCAGGCCGAG CCG CTCGGCCGGCG TTTTGACCTCGCCCT TERM 3530 3852481 - 3852503 + g 78 -14.8 -3.08046 | overlap 3852480 GTTTTTTTTCGTTCT GCAGGCCGAG CCG CTCGGCCGGC GTTTTGACCTCGCCC TERM 3531 3853331 - 3853301 - G 83 -15.5 -3.17685 | opp_overlap 3853301 3853307, overlap 3853289 GAAGCAGAGACCGAA GCCGAAGAGCGCA ACACG CGCGCTCTTCAGC TCGTTAAGCAACACA Nham_3505 3856472 - 3853659 - | pyruvate phosphate dikinase TERM 3532 3855129 - 3855075 - G 78 -10 -4.08767 | gap 3, overlap 3855128 TTCATCCGGGGAAAA CGCGATCTCG-CCGGCC-G-CGGCGCC GGGC GAGGCCGGCAGGCCGGTCGCAATCACG TCGCGCGTCGCGTTG TERM 3533 3856549 - 3856533 - R 76 -13.7 -2.78596 | opp_overlap 3856528, overlap 3856501 CACGTTTTGACGACA CCGCGCA AGC TGCGCGG ACGCCGTTTCCGCTG TERM 3534 3856751 - 3856782 + r 100 -19.6 -3.67976 | opp_overlap 3856758, overlap 3856752 3856758 GTACGGTGCAGATCG TGAAAAAGCCCGGC TTAC GCCGGGCTTTTTCG TTTGCAGTTCGTCAG TERM 3535 3856752 - 3856781 + r 100 -20.9 -2.80464 | opp_overlap 3856758, overlap 3856751 3856758 TACGGTGCAGATCGT GAAAAAGCCCGGC TTAC GCCGGGCTTTTTC GTTTGCAGTTCGTCA TERM 3536 3856758 - 3856775 + r 100 -14.1 -4.99134 | opp_overlap 3856758, overlap 3856752 3856751 GCAGATCGTGAAAAA GCCCGGC TTAC GCCGGGC TTTTTCGTTTGCAGT TERM 3537 3856775 - 3856758 - R 100 -14.1 -4.61231 | opp_overlap 3856758 3856752 3856751 GCAGATCGTGAAAAA GCCCGGC TTAC GCCGGGC TTTTTCGTTTGCAGT Nham_3506 3858737 - 3856821 - | ATP-dependent metalloprotease FtsH TERM 3538 3859129 - 3859082 - R 70 -5.1 -4.54727 | gap 3, opp_overlap 3859089, overlap 3859083 3859085 CGCGTCAAATCAAAA CCATAGAGCC-T--CGCTTCTGAT TCC ATCAGAAGCGAAAAGGCTCTAGTG CATGTTAACGCATGA Nham_3507 3860274 - 3859237 - | tRNA(Ile)-lysidine synthetase-like TERM 3539 3860324 - 3860296 - R 93 -17.7 -3.40522 | opp_overlap 3860290, overlap 3860322 ATGCCTGGATCACAA TGATTTTGGATCG AAT CGATCCAAAATCA TGAGCATGATCGATT Nham_3508 3861575 - 3860565 - | TPR repeat-containing protein TERM 3540 3860658 - 3860670 + g 75 -3.3 -4.86731 | overlap 3860653 3860649 CTCGCCGAGCGCGGC GCAGG CGG CCTCC TTTTCTTTCAGCGCG TERM 3541 3861114 - 3861147 + g 88 -16.7 -3.36327 | gap 1, overlap 3861115 CGGCATCTGTCCGCC GCCCAGCGCGCGCGGG ACA CCCG-GCGCGTTGGGA TTCTGGCTGGGATCG TERM 3542 3861115 - 3861146 + g 90 -20.2 -2.61582 | gap 1, overlap 3861114 GGCATCTGTCCGCCG CCCAGCGCGCGCGGG ACA CCCG-GCGCGTTGGG ATTCTGGCTGGGATC TERM 3543 3861505 - 3861482 - G 83 -9.4 -4.371 | GTGACGACAGCAAAA GCGTCGCGGC AACG GCCGCTGCGC GCGCAAGCATCGGGG TERM 3544 3861788 - 3861745 - R 77 -2.4 -5.07652 | gap 1, opp_overlap 3861747, overlap 3861747 CGCGTCAAAATAAAA GGC-TGGAGCCCGGATTTGAT CCC ATCAAATCCGGAATAGGTGCC CTGGCAGTCCCGGCG TERM 3545 3861834 - 3861813 - R 100 -18.7 -4.64861 | CCGGCGCAAAACAAA GCCGGCGCC CGAA GGCGCCGGC TGAAATCCAGGATGC Nham_3509 3862352 - 3861858 - | OmpA/MotB TERM 3546 3862008 - 3862038 + g 71 -11.1 -3.4072 | gap 1, opp_overlap 3862007 3862008 3862003, overlap 3862012 CAGGAAAGAACGAAC CGTCTGCGCGCGGC GCGC GCCGAGCGC-GATG TTGTACTCGCGGGTG TERM 3547 3862203 - 3862181 - G 77 -4.1 -4.86731 | CGCTCTCAAAGAAAA CGCGGTC GCCGACATT GACCACG AAATCCTGCTGGCTG Nham_3510 3863402 - 3862659 - | hypothetical protein Nham_3511 3865964 - 3863619 - | diguanylate cyclase/phosphodiesterase TERM 3548 3863996 - 3863968 - G 76 -7.3 -4.2558 | TAGCCGGTACCAAAA TCGTCGAGCGAAA TCC TCACGCCCGCCGA GCGCAACTGCGTGAG TERM 3549 3865231 - 3865200 - G 70 -12.4 -3.18264 | gap 1, opp_overlap 3865198 3865196 GCGGCGATGCACGAA GCTGTCGGCGAGATG CAT CATTTCGCCGA-AGC GATAGTTCATCACGC tolB 3867618 - 3866266 - | translocation protein TolB TERM 3550 3866977 - 3866947 - G 76 -8.9 -4.11216 | gap 1 GGTCGAGGGCGAAAA GCGCGGCG-TGATC ACGA GGTCGGCGCCGCGC GTCAGATAGCGCACG Nham_3513 3868608 - 3867664 - | putative TolA Nham_3514 3869065 - 3868610 - | biopolymer transport protein ExbD/TolR Nham_3515 3869810 - 3869097 - | MotA/TolQ/ExbB proton channel TERM 3551 3870199 - 3870225 + r 84 -15.8 -2.62184 | opp_overlap 3870200 TTGCCGAACGCAAGA ACGCCCGCCTGT TGT GCAGGCGGGCGG TCATGTCGGCGGCGC TERM 3552 3870224 - 3870200 - R 100 -18.6 -3.73068 | opp_overlap 3870199 TGCCGAACGCAAGAA CGCCCGCCTG TTGTG CAGGCGGGCG GTCATGTCGGCGGCG Nham_3516 3870783 - 3870286 - | hypothetical protein TERM 3553 3870843 - 3870853 + r 70 -2.4 -4.82901 | CATTTACATAGCTAG ACCG TTG CGGA TTTTTGTCAAGCGCG TERM 3554 3870904 - 3870884 - R 72 -4.6 -4.56775 | gap 1, opp_overlap 3870902, overlap 3870885 AGTTTGCGCGAAAAA CGCCGCCGC GGTC GCGGCC-CG GTTCCCGATATTACG Nham_3517 3871761 - 3871051 - | TetR family transcriptional regulator TERM 3555 3871639 - 3871589 - G 71 -10.8 -3.53012 | overlap 3871590 TCGCGGTCGCGGAAA TGCCGGTACGGCGCCGCCGGGCTG ACG CCGGCCGACCGCGCGGCATCGGCG AAGGTGAAACCCGCA TERM 3556 3871638 - 3871590 - G 75 -14.3 -2.71712 | overlap 3871589 CGCGGTCGCGGAAAT GCCGGTACGGCGCCGCCGGGCTG ACG CCGGCCGACCGCGCGGCATCGGC GAAGGTGAAACCCGC Nham_3518 3872328 - 3871909 - | hypothetical protein TERM 3557 3872523 - 3872503 - R 76 -12.6 -3.05384 | GCCGGGTTTACTGAA TCGTCCGG TCAGG CCGGACGA TGACGGACGGGACTC Nham_3519 3873031 - 3872558 - | 3-demethylubiquinone-9 3-methyltransferase TERM 3558 3872735 - 3872756 + g 70 -10.1 -3.66732 | gap 1, opp_overlap 3872731 GCCGCACTTAAGCGG GC-CGCCGCC ACC GGCGGTGAGC TTGTTCCAGTAGTTA Nham_3520 3873723 - 3873262 - | 4-hydroxybenzoyl-CoA thioesterase ruvB 3874763 - 3873720 - | Holliday junction DNA helicase B TERM 3559 3874663 - 3874687 + g 71 -11.4 -3.53012 | opp_overlap 3874677 TTGGCGCGGGCCTGA GCCTGGCCGA CGAAC TCGGCCAGCC TTTGCGGCCGCAGCA ruvA 3875380 - 3874760 - | Holliday junction DNA helicase motor protein TERM 3560 3875263 - 3875242 - G 77 -15.1 -2.64616 | TCTCGATCGACAGCA CCGCCGCCG CGCC CGGCGACGG TAGCGCCTGCAGCGT ruvC 3875913 - 3875377 - | Holliday junction resolvase TERM 3561 3875517 - 3875546 + g 100 -7.1 -5.44721 | gap 1, overlap 3875518 3875518 TCGCCTGGATCTGGG TC-TTGTCGGCGTG ACC CGCGCCGACCACGG TTTTTTTCACCTGAT TERM 3562 3875518 - 3875545 + g 71 -8.4 -3.85748 | gap 1, overlap 3875518 3875517 CGCCTGGATCTGGGT C-TTGTCGGCGTG ACC CGCGCCGACCACG GTTTTTTTCACCTGA TERM 3563 3875993 - 3875956 - R 100 -19.4 -3.62864 | gap 1, opp_overlap 3875953 3875952, overlap 3875959 3875960 CAAAGCCATTGGAAA GAACCGTCATGGCCGGA TTTAT TCCGGCCATGAC-GTTC GCAATTTACAACAGC TERM 3564 3875991 - 3875959 - R 100 -17.8 -3.94188 | opp_overlap 3875953 3875952, overlap 3875956 3875960 AGCCATTGGAAAGAA CCGTCATGGCCGGA TTTAT TCCGGCCATGACGT TCGCAATTTACAACA TERM 3565 3875990 - 3875960 - R 100 -21.3 -2.96031 | opp_overlap 3875953 3875952, overlap 3875959 3875956 GCCATTGGAAAGAAC CGTCATGGCCGGA TTTAT TCCGGCCATGACG TTCGCAATTTACAAC Nham_3524 3877363 - 3875999 - | magnesium transporter TERM 3566 3877620 - 3877600 - R 79 -13.9 -3.08996 | CATTGCGAGCCAACA GGTCGGCGC GAA GCGCCGCCC GATGACGGGGGTGGC Nham_3525 3878396 - 3877650 - | hypothetical protein Nham_3526 3879077 - 3878544 - | hypothetical protein TERM 3567 3879080 - 3879066 - G 78 -2.8 -5.0538 | overlap 3879067 GCCGATGGTAAAAAA CGGATA CGC CATCCA TCAGGTCCAGAACGA Nham_3527 3879902 - 3879081 - | hypothetical protein Nham_3528 3880492 - 3879905 - | 5-formyltetrahydrofolate cyclo-ligase Nham_3529 3881469 - 3881086 - | hypothetical protein Nham_3530 3881798 - 3881466 - | hypothetical protein TERM 3568 3882168 - 3882155 - g 77 -3.7 -4.82678 | overlap 3882156 3882157 GTAGAAAAAGCAAAA TCGGG CCAT CCCGG CCTGCCGATGGGCAT TERM 3569 3882761 - 3882720 - g 78 -15.9 -2.75064 | gap 1, overlap 3882717 GCTGGGACGCAAGGA GGATCGACGGTCACGATCCC AAG GCGATCGCGGCCG-CGATCC GTCGGGCGCAAAAAT Nham_3531 3882035 - 3884071 + | transketolase TERM 3570 3884331 - 3884304 - g 74 -10.6 -3.74747 | opp_overlap 3884330, overlap 3884305 CCAAGCGCGACGAAA TCGAGATCGTCG CCAT CAACGATCTCGG CCCGGTGGAAACCAA TERM 3571 3884330 - 3884305 - g 74 -14.1 -2.84527 | overlap 3884304 CAAGCGCGACGAAAT CGAGATCGTCG CCAT CAACGATCTCG GCCCGGTGGAAACCA Nham_3532 3884219 - 3885226 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 3572 3885237 - 3885283 + F 100 -32.5 -3.05463 | gap 1, opp_overlap 3885237 TCTGAGACGACGACA C-GTCCCGGGCGCATCGCGGCG CAAG TGCCGCGATGCGCCCGGGACCG TTCAATACCGCAACT TERM 3573 3885282 - 3885237 - f 100 -32 -2.84634 | opp_overlap 3885237 TCTGAGACGACGACA CGTCCCGGGCGCATCGCGGC GCAAGT GCCGCGATGCGCCCGGGACC GTTCAATACCGCAAC TERM 3574 3885773 - 3885748 - g 93 -7.6 -5.13344 | gap 1, overlap 3885751 AGAGGAAGAGAAAAA CGA-TCCGGCG TTCGT CGCCGAACTCG CCAAGCTCGGCGACA pgk 3885368 - 3886564 + | phosphoglycerate kinase Nham_3534 3886676 - 3887707 + | fructose-bisphosphate aldolase TERM 3575 3887801 - 3887819 + F 95 -6.6 -5.45802 | opp_overlap 3887798, overlap 3887798 3887796 GCGCGGATCACAGGC GCGGGAGC CGC GCTCTAGC TTTTTGTTTTGACGC TERM 3576 3887868 - 3887920 + F 100 -14.3 -4.41494 | opp_overlap 3887874 3887875, overlap 3887869 3887874 3887875 GGTACCCACTTCGCT CGAAAACGCTAGAGTCTGATTCAAC CGG GTTGAATCAGACCCTGGCCTTATCC TTTTGATTGAGCATG TERM 3577 3887869 - 3887919 + F 93 -17.8 -3.24414 | opp_overlap 3887874 3887875, overlap 3887868 3887874 3887875 GTACCCACTTCGCTC GAAAACGCTAGAGTCTGATTCAAC CGG GTTGAATCAGACCCTGGCCTTATC CTTTTGATTGAGCAT TERM 3578 3887914 - 3887874 - f 100 -16.3 -4.07885 | opp_overlap 3887869 3887868 3887874 3887875, overlap 3887875 CACTTCGCTCGAAAA CGCTAGAGTCTGATTCAAC CGG GTTGAATCAGACCCTGGCC TTATCCTTTTGATTG TERM 3579 3887874 - 3887914 + F 100 -16.3 -3.72152 | opp_overlap 3887874 3887875, overlap 3887869 3887868 3887875 CACTTCGCTCGAAAA CGCTAGAGTCTGATTCAAC CGG GTTGAATCAGACCCTGGCC TTATCCTTTTGATTG TERM 3580 3887875 - 3887913 + F 100 -19.8 -2.82207 | opp_overlap 3887874 3887875, overlap 3887874 3887869 3887868 ACTTCGCTCGAAAAC GCTAGAGTCTGATTCAAC CGG GTTGAATCAGACCCTGGC CTTATCCTTTTGATT TERM 3581 3887913 - 3887875 - f 100 -19.8 -3.04517 | opp_overlap 3887875 3887874 3887869 3887868, overlap 3887874 ACTTCGCTCGAAAAC GCTAGAGTCTGATTCAAC CGG GTTGAATCAGACCCTGGC CTTATCCTTTTGATT TERM 3582 3888237 - 3888273 + G 76 -7.2 -4.25104 | gap 2, opp_overlap 3888236 ATTTCGCGCATCAAG GCGCTGGCGCCAGCGATC CAG GGTGAC-GGCGCC-GCGC TTTTGCTCGACGGCC Nham_3535 3888057 - 3888758 + | thiamine monophosphate synthase TERM 3583 3889737 - 3889722 - g 72 -3.9 -4.57837 | overlap 3889723 ACATCGTGGCAAAAA CCGCC GGCAAG GGCGA TCTGATGCTCGACGA Nham_3536 3888755 - 3889828 + | Sel1 Nham_3537 3889894 - 3890685 + | inositol-1(or 4)-monophosphatase TERM 3584 3890752 - 3890737 - T 71 -7.6 -4.04206 | opp_overlap 3890737 3890732 CGAGGTCGAGACAAA TTTGGC GTTG GCCAAA TTTGCTCTTGGCGAA TERM 3585 3890880 - 3890938 + T 88 -14.6 -3.57144 | gap 3 ATGGGACGTGACGGT TCACACTGGTCGCCG-CGCTCGCTACTCG GCTG CGTGCAGCG-GCGCCGGCGGCCCGTG-GA TTTCCGGCTCGCCCA Nham_3538 3894071 - 3890901 - | hydrophobe/amphiphile efflux-1 HAE1 TERM 3586 3891193 - 3891164 - G 73 -6.3 -4.25104 | gap 1 GGCCGGTCATCAAAA TCG-GGCGGAAGCG CAG CGCGCACGCCTCGA TCGTGGCTTCCCGGA TERM 3587 3892752 - 3892716 - G 70 -12.3 -3.15544 | opp_overlap 3892715 3892716 CGCCATCGGCACGAA CACCGCCATCAGCACCA GCG TGATGCCGATGATGGCG CTTGTGATCTGCGAC TERM 3588 3893626 - 3893605 - G 74 -10.1 -3.78775 | opp_overlap 3893615 3893618 TTGCGCATGATGAAA TCGCCGAGG CCGA CCTCGTCGA GGCTGTTGTCGGTCG Nham_3539 3895283 - 3894075 - | secretion protein HlyD TERM 3589 3895349 - 3895335 - H 75 -5.6 -4.68593 | overlap 3895321 3895336 3895337 TGCAGGACGCAAAAA CCCGCG TTC CGCGAA GCGTGATGCCTCGCA Nham_3540 3895374 - 3895739 + | hypothetical protein Nham_3541 3895759 - 3896820 + | hypothetical protein TERM 3590 3897477 - 3897453 - g 72 -7.8 -4.12902 | gap 1 CAAGGAGTCGCAAAA CCGCATCGCCG ATCT CGGCCA-GCGG CTGAACGTCGCGCTG Nham_3542 3896935 - 3897966 + | hypothetical protein Nham_3543 3898011 - 3898472 + | GCN5-related N-acetyltransferase Nham_3544 3900475 - 3898586 - | ABC transporter, ATP-binding/permease protein TERM 3591 3899362 - 3899316 - G 81 -16.5 -2.82516 | overlap 3899294 TCGTCCAGCACGACA TCGCCGCGCGACGGCACCG-GCA GCG CGCGCGGCGCCGGCG-GCGGCGC GATCACCGGCTTGAC TERM 3592 3900115 - 3900093 - G 73 -6.9 -4.35042 | gap 1, overlap 3900094 3900095 GTCACCAGAAAATAA CGCGCC-GCG CTGG CGCCGGCGAG GACGGCCACGACGCC rpmE 3900628 - 3900855 + | 50S ribosomal protein L31 TERM 3593 3900903 - 3900883 - T 79 -12.5 -3.28712 | opp_overlap 3900883 TGCGGGTTTTCAGAA CGCTTCCGC CGC GCGGGAGCG TTTTCGTTGGACCTG TERM 3594 3900883 - 3900903 + T 100 -14.7 -4.41494 | opp_overlap 3900883 TGCGGGTTTTCAGAA CGCTTCCGC CGC GCGGGAGCG TTTTCGTTGGACCTG Nham_3546 3901533 - 3901012 - | hypothetical protein TERM 3595 3901721 - 3901704 - R 100 -14.1 -5.95166 | opp_overlap 3901703 CGCAAGCAAAAAAAA GCCGCCG TTTC CGGCGGC CTGAGTTGATAACAG Nham_3547 3902101 - 3901910 - | hypothetical protein TERM 3596 3902051 - 3902066 + g 82 -3.2 -5.10208 | overlap 3902019 CGAGAGATCCTGTCC GATCTC GTGG GCGATC TTTTTCTTCGGCTTG TERM 3597 3903170 - 3903143 - g 74 -12.7 -3.34962 | TTCGATAGCCGACAA GGCCGCGATGG TCGGCG CCATCGAGGCC AGGGTGCTGCCGCTG Nham_3548 3902307 - 3903305 + | zinc-binding alcohol dehydrogenase TERM 3598 3904697 - 3904722 + G 83 -17.5 -2.62616 | GATGCAGCACGCCTT CGCCGGCGGCG GCGC CACCGCCGGCG TGGTGTCGGACGTCG Nham_3549 3903543 - 3906425 + | diguanylate cyclase/phosphodiesterase Nham_3550 3907286 - 3906636 - | hypothetical protein TERM 3599 3907253 - 3907267 + g 100 -12.8 -4.59773 | CGTCAGTCTGGCGAC GGCCCG TGC CGGGCC TTTTTCGCGCTGCAC TERM 3600 3907575 - 3907599 + G 70 -9.9 -3.60098 | overlap 3907576 GGGCTCGCGCAGCGG TGCGGTGCTGC TCG GCGGCGTCGCG TTTCAGCTCGAGCCT TERM 3601 3907629 - 3907664 + G 81 -11.9 -3.89215 | gap 2, opp_overlap 3907626 3907625 3907629, overlap 3907629 3907644 TGGATGGAAAACCTA C-TGGC-GCACGCCGGG CGAC TCCGGCGTGCCGCCGCG TTTCGATTTCTCCAG Nham_3551 3907423 - 3908265 + | hypothetical protein Nham_3552 3909629 - 3908520 - | transposase, IS4 Nham_3553 3909882 - 3911258 + | polysaccharide biosynthesis protein TERM 3602 3911272 - 3911299 + T 72 -6.3 -4.40561 | gap 1, opp_overlap 3911262 3911270, overlap 3911275 AACAACGAACGGACA TCG-TACGCGGG CTTGA CCCGCGTATCCA TTATTTTTCAAAGGG TERM 3603 3911275 - 3911295 + T 73 -12.6 -2.79912 | opp_overlap 3911262 3911270, overlap 3911272 AACGAACGGACATCG TACGCGGG CTTGA CCCGCGTA TCCATTATTTTTCAA Nham_3554 3912174 - 3911386 - | 3-hydroxybutyrate dehydrogenase Nham_3555 3913362 - 3912208 - | patatin TERM 3604 3912415 - 3912427 + g 91 -9.1 -4.4078 | opp_overlap 3912408 3912405 ATAGATCAGGTGAAC CACCG TGA CGGTG TTTTCCTTGGCCGCC TERM 3605 3912684 - 3912655 - G 70 -10.1 -3.61654 | opp_overlap 3912663, overlap 3912644 3912663 CAGATCGACCTGAAA GATCAAAAGATCG GACG CGGTCTTCTGATC CAGCACGTAATCCAG Nham_3556 3913961 - 3913455 - | Allergen V5/Tpx-1 related TERM 3606 3913782 - 3913794 + g 70 -10.5 -3.62046 | CGGATCGACCGTCAC CGGGC CGA GCCCG TTATTGGCGCGATAG Nham_3557 3915073 - 3914024 - | sulphate transport system permease protein 1 TERM 3607 3914067 - 3914112 + g 74 -10.3 -3.70438 | gap 1, overlap 3914068 CGCCGGGGCTGCAGG CCGACG-ACCTCGCCATCGCGA AGC TCGCGGTCGCGCGGCGCGTCGA TTTCAATGATGGTTT TERM 3608 3914068 - 3914111 + g 72 -13.8 -2.8154 | gap 1, overlap 3914067 GCCGGGGCTGCAGGC CGACG-ACCTCGCCATCGCGA AGC TCGCGGTCGCGCGGCGCGTCG ATTTCAATGATGGTT TERM 3609 3914661 - 3914605 - G 84 -13.7 -3.71284 | gap 3, overlap 3914602 3914600 CGTCGAGCAACAGAA CGCGCGGCTCGATCGCAAGCGCG-CGCG CCAG CGCGACGCGCTGGCGCT-G-GCCACCCG AGAGCTGGCCGGGGT Nham_3558 3915941 - 3915063 - | Sulfate ABC transporter, permease protein CysW Nham_3559 3916780 - 3915944 - | Sulfate ABC transporter, permease protein CysT Nham_3560 3917794 - 3916805 - | thiosulphate-binding protein Nham_3561 3918683 - 3917919 - | phosphoadenosine phosphosulfate reductase Nham_3562 3920116 - 3918680 - | uroporphyrin-III C-methyltransferase Nham_3563 3920373 - 3921179 + | sulfate adenylyltransferase subunit 2 Nham_3564 3921204 - 3923129 + | Sulfate adenylyltransferase, large subunit TERM 3610 3923156 - 3923193 + F 75 -11.9 -3.17797 | gap 1 CTTGCAAGCGTTCGA CCGGATGACCGCCGCCAA TCG TAGGGGGCGG-CACCCGG TTGACTCTGTGTGCG TERM 3611 3923494 - 3923478 - g 76 -10.1 -3.91897 | TCTCGGACCGAGAAA CCGCGAA TTG CTCGCGG TGCGCGATACGCTGC TERM 3612 3923568 - 3923546 - g 74 -4.7 -4.63486 | opp_overlap 3923565, overlap 3923548 ATCGCGCCAACAAAA GCCGGCCGT TCGAC ATGGCCGCC TACACGGCGTTCCTG TERM 3613 3923692 - 3923663 - g 72 -4.2 -4.65168 | gap 1, overlap 3923664 3923665 ACGAGATCGGAAAAA TCTGCGG-ACCGC AACTG GTGGTGCCGCTGA CCAATGCCCGTTACG TERM 3614 3924053 - 3924101 + G 78 -15.1 -2.82516 | opp_overlap 3924081 ATATCGACATCCGGA TCGACCGCGCCGACCGCATCGGC AAG GACGATCCGGCCGGCGTCGCCGA TGTGATCATCGAGGC TERM 3615 3924421 - 3924387 - g 73 -7.1 -4.26903 | gap 1 GGTACTGGATGAAAA CGGCGCAGAG-ATTCC GGAA GGTATGCTCGACGCCG CGGTATCAAGCCTGC Nham_3565 3923332 - 3925515 + | malate synthase G TERM 3616 3925543 - 3925567 + T 100 -15.7 -5.42975 | opp_overlap 3925543 GCGAATGACGTGAAA TGCCCCCGGCG CGG TGTCGGGGGCA TTTTTATTTGTCTCA TERM 3617 3925567 - 3925543 - T 84 -12.8 -3.63895 | opp_overlap 3925543 GCGAATGACGTGAAA TGCCCCCGGC GCGGT GTCGGGGGCA TTTTTATTTGTCTCA Nham_3566 3925761 - 3925606 - | hypothetical protein TERM 3618 3925902 - 3925936 + H 71 -10.7 -3.53031 | gap 1, opp_overlap 3925875 3925905 3925923, overlap 3925898 AGCTTGCCGAGCAAG CGAGCGCGTCGCGG AACCTAAG CCGCGACG-GCACG TTGGTTTGCCATACC Nham_3567 3925974 - 3926345 + | protein of unknown function DUF883, ElaB TERM 3619 3926561 - 3926575 + G 76 -5.6 -4.64657 | overlap 3926562 TGCGGCTGACGTCCC TCGCCG GGG TGGCGG TTTTTGCGGGTTTCG Nham_3568 3926497 - 3926940 + | hypothetical protein Nham_3569 3927378 - 3926977 - | hypothetical protein TERM 3620 3927610 - 3927620 + r 77 -2.4 -5.055 | TATTGGCAAGCATGC CGGC CGC GCCC TTTTTTGCACGTTGC Nham_3570 3928470 - 3927712 - | two-component response regulator Nham_3571 3928709 - 3928930 + | hypothetical protein Nham_3572 3928930 - 3929475 + | RNA polymerase sigma factor Nham_3573 3931214 - 3929544 - | signal transduction histidine kinase TERM 3621 3930298 - 3930323 + g 72 -3.8 -4.57073 | opp_overlap 3930269 3930298, overlap 3930306 CTTGTCAGCGCAAGA CCGATCGCGG CCACCA CCGCGGCCAG TTTTTGCGCGCGATG TERM 3622 3931468 - 3931515 + r 74 -7.3 -4.27316 | gap 3, overlap 3931469 GCGGCGAGACGTCAG GCGTAGAGCCTTTTCGCTTCTGAT GGA ATCAGAAGCG--A-GGCTCTATGA TTTTGAATTGACGCG Nham_3574 3932849 - 3931578 - | MiaB-like tRNA modifying enzyme TERM 3623 3932459 - 3932491 + g 87 -6.1 -5.2189 | opp_overlap 3932449 CGAGATGCGGCGCCA TCTCGGTCACCGCCA TGA TGTCGGCGACGGCGA TTTTTTCCTCGTTCG dapF 3933721 - 3932849 - | diaminopimelate epimerase TERM 3624 3933314 - 3933343 + g 79 -9.1 -4.11394 | overlap 3933315 GGTATCGCGGAATTC CTCGGCGAGCGGG ATGT CCCGCCAGCCGAA TTTTGGCGGTCCCAT TERM 3625 3933315 - 3933342 + g 71 -12.6 -3.06515 | overlap 3933314 GTATCGCGGAATTCC TCGGCGAGCGGG ATGT CCCGCCAGCCGA ATTTTGGCGGTCCCA Nham_3576 3933984 - 3934712 + | transcription activator, effector binding Nham_3577 3934709 - 3935428 + | hypothetical protein TERM 3626 3936355 - 3936332 - g 70 -7.5 -3.9941 | CGCTCGACAACGAAA TGATGTCCG AGGCGG CGAACATCA AGGCCGCCGCCCGCC TERM 3627 3936605 - 3936566 - g 100 -9.2 -5.02074 | gap 1 GTACCGGCGAAAAAA CCGACG-CGCTGGAGGATT TCC ATCCCTCCCGCATCGCCGG CCGCATCCTCGGCAT Nham_3578 3935731 - 3937266 + | signal recognition particle protein TERM 3628 3937275 - 3937264 - f 70 -4.4 -4.44667 | overlap 3937260 CCCCGGAAGAAGAAA TGAC TGCC GTCA CTCCCTCCCATCCCA rpsP 3937487 - 3937819 + | 30S ribosomal protein S16 Nham_3580 3937832 - 3938353 + | 16S rRNA processing protein RimM Nham_3581 3938487 - 3939203 + | tRNA (guanine-N1)-methyltransferase rplS 3939431 - 3939811 + | 50S ribosomal protein L19 TERM 3629 3939846 - 3939863 + F 100 -14.1 -5.46657 | opp_overlap 3939846 CGAAGCTTTTCGAAA GCGCGGC ATCG GCCGCGC TTTTTTATTGCCGTG TERM 3630 3939863 - 3939846 - f 88 -14.1 -3.54459 | opp_overlap 3939846 CGAAGCTTTTCGAAA GCGCGGC ATCG GCCGCGC TTTTTTATTGCCGTG TERM 3631 3940027 - 3940046 + G 74 -4.8 -4.58283 | TCGTGATCGACGACC GCAGCCGG TTGC CCGGACGC TTTTTCGGACGGTTC Nham_3583 3939942 - 3940100 + | hypothetical protein TERM 3632 3940704 - 3940677 - g 81 -9.9 -4.21086 | gap 1, overlap 3940674 3940680 GAAGAAAGCAAAGAA CATGCGCGCCGT CGTCT ACGGCACGC-TG CCGGACGGCGTCACC TERM 3633 3941518 - 3941555 + G 90 -15.5 -3.73775 | overlap 3941520 CGCACGCATCTGGTG TCGCCGGCGATGGCGGC GGCG GCCGCGATCGCCGGACA TTTCGTCGACGTGCG TERM 3634 3941520 - 3941554 + G 90 -17.9 -2.84051 | gap 1, overlap 3941518 CACGCATCTGGTGTC G-CCGGCGATGGCGGC GGCG GCCGCGATCGCCGGAC ATTTCGTCGACGTGC Nham_3584 3940177 - 3941583 + | isopropylmalate isomerase large subunit Nham_3586 3942057 - 3942578 + | hypothetical protein Nham_3587 3943005 - 3942694 - | hypothetical protein TERM 3635 3943102 - 3943082 - R 100 -18.3 -5.75342 | opp_overlap 3943084 GCCGCGTAAAAAAAA CAGGCCCGC AAC GCGGGCCTG TTCGACTATGGGCGG TERM 3636 3943084 - 3943100 + r 85 -15.1 -3.07962 | opp_overlap 3943082 CGCGTAAAAAAAACA GGCCCGC AAC GCGGGCC TGTTCGACTATGGGC Nham_3588 3943539 - 3943237 - | hypothetical protein TERM 3637 3943877 - 3943843 - R 76 -12.2 -3.43654 | gap 2, overlap 3943818 3943846 GAAATACATCGAGAA CGAGCCGAGCGGCGCC CGCGC GGCGCCG-TCAGC-CG TGGCGCCAGTAACAG TERM 3638 3943866 - 3943846 - R 76 -13.9 -2.8598 | overlap 3943843 ATACATCGAGAACGA GCCGAGCGG CGC CCGCGCGGC GCCGTCAGCCGTGGC Nham_3589 3944194 - 3943871 - | hypothetical protein Nham_3590 3944323 - 3944724 + | hypothetical protein leuD 3944793 - 3945398 + | isopropylmalate isomerase small subunit Nham_3592 3945592 - 3946254 + | carbonate dehydratase TERM 3639 3946304 - 3946324 + T 70 -3.9 -4.63218 | opp_overlap 3946292 3946312, overlap 3946305 AAAGCCTGGCGCCGC GGCGTAAAG CAT CTTGACGCG TTTTCTTCACGCGAA Nham_3593 3947431 - 3946397 - | aspartate-semialdehyde dehydrogenase Nham_3594 3947944 - 3948336 + | hypothetical protein TERM 3640 3948388 - 3948360 - T 100 -11.8 -4.4648 | opp_overlap 3948365, overlap 3948365 ACCGCGATCATAAAA GAAAATGCCCGG GACAA CCGGGCATTTTT GTTGAACACTTTATT TERM 3641 3948383 - 3948365 - T 100 -11.7 -5.20781 | opp_overlap 3948365, overlap 3948360 GATCATAAAAGAAAA TGCCCGG GACAA CCGGGCA TTTTTGTTGAACACT TERM 3642 3948365 - 3948383 + T 100 -11.7 -5.06816 | opp_overlap 3948365 3948360 GATCATAAAAGAAAA TGCCCGG GACAA CCGGGCA TTTTTGTTGAACACT Nham_3595 3949533 - 3948421 - | 3-isopropylmalate dehydrogenase TERM 3643 3949592 - 3949572 - H 81 -12.6 -3.53224 | opp_overlap 3949573 CACGGCCGGGCTAAA GCGCGAAG CGCGT CTTCGCGC AGACGTCCCGGCCAT Nham_3596 3949783 - 3950979 + | major facilitator transporter TERM 3644 3950982 - 3951026 + T 100 -34.7 -5.07652 | opp_overlap 3950985 3950987 3950989 CGCGCCGTCCTGACA GCATAGAGCCCCGCTTCTGAT GGA ATCAGAAGCGGGGCTCTATGC TTTTATTTTGGCGCG TERM 3645 3951023 - 3950985 - T 100 -29.2 -2.62184 | opp_overlap 3950982, overlap 3950987 3950989 GCCGTCCTGACAGCA TAGAGCCCCGCTTCTGAT GGA ATCAGAAGCGGGGCTCTA TGCTTTTATTTTGGC TERM 3646 3951021 - 3950987 - T 100 -27.4 -2.85351 | opp_overlap 3950982, overlap 3950985 3950989 CGTCCTGACAGCATA GAGCCCCGCTTCTGAT GGA ATCAGAAGCGGGGCTC TATGCTTTTATTTTG TERM 3647 3951019 - 3950989 - T 100 -24.2 -2.97747 | opp_overlap 3950982, overlap 3950987 3950985 TCCTGACAGCATAGA GCCCCGCTTCTGAT GGA ATCAGAAGCGGGGC TCTATGCTTTTATTT Nham_3597 3951618 - 3951109 - | superoxide dismutase, copper/zinc binding TERM 3648 3951313 - 3951349 + g 78 -12.4 -3.78934 | gap 1, opp_overlap 3951301, overlap 3951315 AAGGTTCGGCATGTC GC-CGGCATGGTGGC CATCGGCC GCCATCATGCCGTGC TTCTTGTCGCCGGGG TERM 3649 3951315 - 3951346 + g 75 -13.8 -2.98545 | opp_overlap 3951301, overlap 3951313 GGTTCGGCATGTCGC CGGCATGGTGGC CATCGGCC GCCATCATGCCG TGCTTCTTGTCGCCG TERM 3650 3951516 - 3951526 + g 86 -8.2 -4.59773 | CCCCGCCCACATCGA CGCC TTC GGCG TTTTTCAGCGTGGCC Nham_3598 3952489 - 3951704 - | oxidoreductase, molybdopterin binding TERM 3651 3952407 - 3952395 - G 74 -10.5 -3.72576 | opp_overlap 3952364 3952363 CCGCCGGCGATGAAA CGGCG GCG CGCCG GATCGGGCAGCAATT Nham_3599 3953130 - 3952501 - | hypothetical protein TERM 3652 3953170 - 3953146 - H 71 -12.1 -2.92157 | CATCAAGTCCACATA TTTCGCCCGCC AGC GACGGGCGAAG AAAGCCTCGCAGATA TERM 3653 3953292 - 3953265 - H 100 -8.4 -5.24129 | opp_overlap 3953291 TCCCTTCACAAAAAA GCGAGCCGGA TCGCCCTG TCCCGCTCGC GCCCGGCCGCACCGT TERM 3654 3953917 - 3953887 - g 73 -11 -3.62096 | opp_overlap 3953912 GGCGATGACGGCAAA GCCGGCGTTCGCAA CCG TCGCGCGCGCCGAC GACGACCTTGCGGCT Nham_3600 3953456 - 3954973 + | malonyl-CoA synthase Nham_3601 3956665 - 3955166 - | RND efflux system, outer membrane lipoprotein, NodT TERM 3655 3955264 - 3955248 - G 76 -6.5 -4.41616 | opp_overlap 3955247, overlap 3955249 AGCGCCTGAAACAAA CTGCTGG CGG CGAGCAG CTTCGTCAGCCGCAC TERM 3656 3955444 - 3955456 + g 76 -6.2 -4.59773 | GCGTATATTGCTGAA GCGC GACGA GCGC TTTTTCAACATCGGC TERM 3657 3955695 - 3955685 - G 71 -8.2 -3.9122 | overlap 3955686 GATTTGCGGAAAGAA CGCG GCC CGCG CCGCCTCGACGCTGA TERM 3658 3955932 - 3955912 - G 73 -12.5 -3.16564 | opp_overlap 3955903 3955920 CCTGCAGCGGAGGAA TGGCGGCCC GCT GGGTCGCCA CCAGCGCTTCCTGTT Nham_3602 3960081 - 3956791 - | acriflavin resistance protein TERM 3659 3960009 - 3959998 - G 93 -7.2 -5.09426 | CGGAAGCTGAAAAAA GGCG ACCA CGCC TACCGCCGCGAGCCC Nham_3603 3963191 - 3960078 - | acriflavin resistance protein TERM 3660 3960201 - 3960183 - G 70 -10.3 -3.61398 | overlap 3960192 GGGTGTGGTGAACAA GGTCAGC AACTG GCTGACC AGCAGGCCACCGACG Nham_3604 3964456 - 3963188 - | secretion protein HlyD TERM 3661 3964857 - 3964828 - H 70 -12.1 -2.78384 | opp_overlap 3964823 3964849 3964851 CGGTCCCGGATCACA CCCCGACCGCTAT CCGG ATGGCGGTCGGGT GCCGATTGTTGAATC Nham_3605 3964967 - 3965869 + | secretion protein HlyD Nham_3606 3966753 - 3965875 - | peptidase C14, caspase catalytic subunit p20 TERM 3662 3968415 - 3968388 - g 70 -10.6 -3.55444 | gap 1 GGCGCATTCTCGAAA CGCCGCAGCGGCT GCA AACCG-TGCAGCG GGTCATCGGCTTCCA Nham_3607 3967166 - 3968902 + | hypothetical protein TERM 3663 3969458 - 3969481 + G 72 -11.7 -3.34522 | opp_overlap 3969473 GCTGATCATTCCCGA TCGGCGCGG CAACAA CCGCGTCGA TTCATTGCGGAATCT Nham_3608 3969225 - 3969839 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Nham_3609 3971819 - 3969897 - | AsmA TERM 3664 3971786 - 3971803 + g 72 -7.7 -4.21194 | gap 1 TCGCGATCAGGCAGG TCGC-GGC AAC GCCTGCGA TTTTCAATGCTCCCA Nham_3610 3975139 - 3972017 - | acriflavin resistance protein TERM 3665 3973127 - 3973148 + g 70 -12.3 -3.15544 | overlap 3973097 AATGCGCTTCATCTG CGTCGCCAG CTCG TTGGCGACG TTGCTGACGATGCCG Nham_3611 3976026 - 3975139 - | secretion protein HlyD TERM 3666 3976327 - 3976345 + H 72 -4.5 -4.61482 | AAGCATGGGGCGGCT TGCGACG CGCCT CGTGGCA TTATTTTTTCGCGGC Nham_3612 3976505 - 3977935 + | major facilitator transporter Nham_3613 3977935 - 3978744 + | HAD family hydrolase TERM 3667 3978777 - 3978829 + G 100 -15.6 -4.11484 | opp_overlap 3978779, overlap 3978779 3978782 CTCGCCGTGATAGGC AACTGCCGCACC-GCCGCGCTTGTCG ATC CGACC-GCGCGGCTGGTGTGGTGGTG TTTTCCGCGCTTCGA TERM 3668 3978779 - 3978827 + G 100 -18.2 -3.6543 | opp_overlap 3978779, overlap 3978777 3978782 CGCCGTGATAGGCAA CTGCCGCACC-GCCGCGCTTGTCG ATC CGACC-GCGCGGCTGGTGTGGTGG TGTTTTCCGCGCTTC TERM 3669 3978827 - 3978779 - g 70 -11.6 -3.12351 | opp_overlap 3978779 3978777 3978782 CGCCGTGATAGGCAA CTGCCGCACC-GCCGCGCTTGTCG ATC CGACC-GCGCGGCTGGTGTGGTGG TGTTTTCCGCGCTTC TERM 3670 3978782 - 3978824 + G 90 -18.5 -2.93623 | opp_overlap 3978779, overlap 3978779 3978777 CGTGATAGGCAACTG CCGCACC-GCCGCGCTTGTCG ATC CGACC-GCGCGGCTGGTGTGG TGGTGTTTTCCGCGC Nham_3614 3978741 - 3980534 + | glycoside hydrolase 15-related TERM 3671 3980577 - 3980563 - f 87 -7.8 -4.72986 | opp_overlap 3980563 3980562, overlap 3980564 CACTTGCAGTAAAAA CCGCTG TGA CAGCGA ATTCTTCCCTCAATA Nham_3615 3980728 - 3982200 + | Alpha,alpha-trehalose-phosphate synthase TERM 3672 3982577 - 3982589 + F 95 -6.2 -5.42259 | TCTCCGCCACCCCCG GCCG CGCAA CGGC TTTTTTTGAAGCTGA Nham_3616 3982985 - 3983383 + | succinate dehydrogenase, cytochrome b subunit Nham_3617 3983386 - 3983787 + | succinate dehydrogenase, cytochrome b subunit TERM 3673 3984978 - 3984948 - g 78 -4.7 -4.7254 | overlap 3984950 AGTCGTCACCAAAAA GACCGGCGACGA-CA ATG CGCTCGT-GCCGGGC CTGATGGCGGTGGGC sdhA 3983791 - 3985614 + | succinate dehydrogenase flavoprotein subunit sdhB 3985715 - 3986497 + | succinate dehydrogenase iron-sulfur subunit Nham_3620 3987061 - 3986636 - | Allergen V5/Tpx-1 related TERM 3674 3986815 - 3986793 - G 70 -7.6 -4.09685 | overlap 3986794 3986796 GCGCAGGTCGGAAAA CCAGCCGCGA CAT TCTCGGCTGC CAGCCGGCGATGGAC Nham_3621 3987121 - 3987354 + | hypothetical protein TERM 3675 3987543 - 3987560 + F 84 -2 -5.46657 | gap 1, overlap 3987530 CATCGGCCAGCAGAC TTC-GCG TTTGT CGCCGAA TTTTTTGTTGGGATA TERM 3676 3988041 - 3988017 - g 70 -7.7 -4.07568 | overlap 3988018 GCGCCCGCGCCAAAA CCGGCGACACC TCC GGTGGCCCCGA AACCGCCCGCGCCCC TERM 3677 3989327 - 3989282 - g 73 -11.1 -3.56092 | gap 1, opp_overlap 3989317 3989318, overlap 3989233 CGATCAGGCCGCAAA GCTGCGGGTGATCGCG-GACGG CAT CAATCGCGCGATCTCGCGCAAC CCGAGCGAGGTGTTC Nham_3622 3987585 - 3989606 + | OmpA/MotB TERM 3678 3989600 - 3989648 + T 72 -5.7 -4.54727 | gap 4, overlap 3989567 3989603 3989604 GTCTCCGCCGCCGCG TCGCTAGAGCCTTTTCGCTTCTGAT GGA ATCAGAAGCG--A-GGCTCTA-TGA TTTTGATTTGAAGCG TERM 3679 3989695 - 3989728 + T 100 -16.9 -5.06414 | opp_overlap 3989696 3989701, overlap 3989701 GAGCAAATATCAAAA TGAAAATGGCCGGGA GCAG TCCCGGCCATTTTTG TTTTTGTTGAAACCG TERM 3680 3989727 - 3989696 - T 89 -16 -3.29733 | opp_overlap 3989695 3989701, overlap 3989701 AGCAAATATCAAAAT GAAAATGGCCGGGA GCAG TCCCGGCCATTTTT GTTTTTGTTGAAACC TERM 3681 3989701 - 3989722 + T 100 -15.9 -5.74684 | opp_overlap 3989701 3989696, overlap 3989695 ATATCAAAATGAAAA TGGCCGGGA GCAG TCCCGGCCA TTTTTGTTTTTGTTG TERM 3682 3989722 - 3989701 - T 100 -15.9 -4.71222 | opp_overlap 3989695 3989701, overlap 3989696 ATATCAAAATGAAAA TGGCCGGGA GCAG TCCCGGCCA TTTTTGTTTTTGTTG Nham_3623 3991073 - 3989844 - | argininosuccinate synthase TERM 3683 3990706 - 3990737 + g 83 -13.1 -3.87373 | gap 2 TCGTTACCCTTGCCG GTC-GCGCCG-TGCG ACAC CGCATCGGCGCCGAC TTTCTCGGCGATCTC Nham_3624 3991937 - 3991149 - | phosphoesterase, PA-phosphatase related TERM 3684 3991885 - 3991858 - G 75 -12.1 -3.57144 | GCCGCGAGGCGCAAA TCGTATTCGGG GCGAAT CCCGAACACGA TTCCGATCACGAGCA Nham_3625 3992462 - 3991986 - | hypothetical protein TERM 3685 3992207 - 3992178 - G 90 -17.9 -2.88861 | overlap 3992195 GATCAGGCCGAGATA GCAGGCGGCGC CGCAAATC GCGCCGCCTGC AGCGTAAGCCAGCAA Nham_3626 3993724 - 3992531 - | hypothetical protein Nham_3627 3994412 - 3993864 - | hypothetical protein Nham_3628 3995329 - 3994901 - | hypothetical protein phhB 3995702 - 3995397 - | pterin-4-alpha-carbinolamine dehydratase Nham_3630 3996066 - 3996467 + | 4Fe-4S ferredoxin, iron-sulfur binding Nham_3631 3996516 - 3996890 + | hypothetical protein Nham_3632 3998994 - 3997078 - | heat shock protein 90 TERM 3686 3999081 - 3999054 - H 74 -6.2 -4.41422 | TGATATAGAAAATAA GCGACCGGCA TGCCAGTG CGCCGACCGC GCCTCCCGCCTCTCG Nham_3633 3999464 - 4000105 + | PepSY-associated TM helix TERM 3687 4000265 - 4000287 + G 71 -9.1 -3.73224 | opp_overlap 4000280 CGAGGCGGCCGACGG CGGCAAGGT CACCA ACCTCGCCG TTTGGTACGAGGTCA Nham_3634 4000116 - 4000628 + | hypothetical protein Nham_3635 4000692 - 4001492 + | hypothetical protein TERM 3688 4001509 - 4001496 - f 93 -9.5 -4.72272 | CTGCCGCAGTAAAAA CGCCG ATGA CGGCG TCAGCCTTCCGGCGC Nham_3636 4001501 - 4002523 + | ApbE-like lipoprotein Nham_3637 4003259 - 4002573 - | putative hydroxylase TERM 3689 4003306 - 4003281 - R 100 -18.3 -4.03234 | opp_overlap 4003279 4003278 4003277 GTCCTTTCAGATAAA GAGCCGGCGCC TCGC GACGCCGGCTC CGATATTGTCACTTC Nham_3638 4005809 - 4003344 - | TonB-dependent siderophore receptor TERM 3690 4005589 - 4005567 - G 84 -11.2 -4.15044 | opp_overlap 4005567 4005582 CGGCGCGGCAACAAA CGGCACCGGC GCG GCCCGTACCG GCGCACGGTGTACGG Nham_3639 4006159 - 4007259 + | MotA/TolQ/ExbB proton channel Nham_3640 4007265 - 4007717 + | biopolymer transport protein ExbD/TolR TERM 3691 4008123 - 4008106 - g 86 -6.9 -5.10033 | overlap 4008109 4008119 GGAAGACAAAGAAAA GACGCCG AACG CAGCGCC TCCGCTGGTTGCCGC Nham_3641 4007714 - 4008469 + | TonB-like TERM 3692 4010154 - 4010184 + G 71 -8.5 -3.86897 | overlap 4010147 4010150 GGGCGATCCGGGGCG CTCCGTCTTCCA-TG CCT CACTGGAAGACG-AG TTTCTGACCAATGCG TERM 3693 4010743 - 4010731 - g 70 -10.5 -3.62096 | CTCGATCACCTCAAA CGCCG GAT CGGCG ACCGCCGGCTCCCGG Nham_3642 4008466 - 4010877 + | SecA DEAD-like Nham_3643 4012550 - 4010946 - | cytochrome-c oxidase TERM 3694 4012742 - 4012774 + r 100 -19.2 -3.83205 | opp_overlap 4012735 4012749 GAGTAGAACCTGTGT CGCAAGACCTGCGC CTTGC GCGCTGGTCTTGCG TTTACTCTCGACCGT Nham_3644 4014001 - 4013099 - | LysR family transcriptional regulator Nham_3645 4014279 - 4015484 + | extracellular ligand-binding receptor Nham_3646 4015626 - 4016489 + | inner-membrane translocator Nham_3647 4016486 - 4017433 + | inner-membrane translocator TERM 3695 4017583 - 4017563 - g 72 -14.1 -2.73875 | overlap 4017560 GGGCCGGCAAGACGA CGCTGATCA GCC TGATCAGCG GGACGCTCGCGCCGA TERM 3696 4017584 - 4017613 + G 74 -5 -4.56775 | gap 2, opp_overlap 4017560, overlap 4017591 4017607 4017608 TCAGCCTGATCAGCG GGACGCTCGCGCCG ACTT CCG-GCGA-CGTCC TTTTTGAAGGGCGGT TERM 3697 4018102 - 4018086 - g 72 -7.9 -4.12188 | overlap 4018088 4018089 GCACCATGGCGAAAA GATCGCC GAC GGCGAAC CCGCAGGCGTGCTCG Nham_3648 4017430 - 4018164 + | ABC transporter related Nham_3649 4018161 - 4018892 + | ABC transporter related Nham_3650 4020008 - 4018998 - | tRNA-dihydrouridine synthase A TERM 3698 4019940 - 4019928 - G 71 -9.1 -3.68073 | overlap 4019925 CAGGCGATGGAACAA TCGGC AAT GCCGA TCGGTCCAATCCATC Nham_3651 4020438 - 4020097 - | hypothetical protein Nham_3652 4020764 - 4021096 + | hypothetical protein TERM 3699 4021600 - 4021615 + T 86 -11.8 -3.96148 | CCGGGCACAGCTTAG CCCCGC TCCG GCGGGG TTTCTACTAGGCGCA TERM 3700 4021779 - 4021789 + T 90 -8.2 -4.89567 | opp_overlap 4021774 4021778, overlap 4021750 GTCTCATAAACCCAG CCCC GGC GGGG TTTTCTATTTTGAAA TERM 3701 4022456 - 4022485 + T 76 -2.8 -5.00616 | gap 1 AAAACTGTCATGCGT GAGCT-CCGCGGT ATGTC AACGTGGCGGCTC TTTTTTGAGAGCGGG Nham_3653 4023075 - 4022758 - | hypothetical protein Nham_3654 4024359 - 4023250 - | transposase, IS4 TERM 3702 4024477 - 4024458 - R 100 -15 -4.20368 | overlap 4024470 CGACGGCAAGATAAA GGCCGGCA GAAA TGCCGGCC CTTGGAACAATGACC Nham_3655 4024651 - 4024499 - | hypothetical protein TERM 3703 4024906 - 4024916 + r 76 -4.6 -4.73633 | TAAGCGAGGGGAGCG CTCC GGC GGGG TTTTCTATCTTCTTA Nham_3656 4025628 - 4025182 - | cupin 2, barrel Nham_3657 4025978 - 4026406 + | cupin 2, barrel Nham_3658 4026483 - 4026725 + | hypothetical protein TERM 3704 4027465 - 4027484 + F 86 -16.4 -2.75183 | opp_overlap 4027462 4027463, overlap 4027463 TGAACTAAGCAAGCG GGGCGCGG GCAA CCGCGCCC TCATTCAATGGCCCT Nham_3659 4028038 - 4028259 + | hypothetical protein TERM 3705 4028561 - 4028582 + G 71 -5.1 -4.45083 | overlap 4028562 ACCGTACCTTCCTCA TCGATGTGC TGGA GGACATCGG TTTTATCACTGTCGA Nham_3660 4028449 - 4029660 + | response regulator receiver/diguanylate phosphodiesterase Nham_3661 4032656 - 4030320 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 3706 4031436 - 4031448 + g 70 -10.5 -3.57792 | CGGCGATGTCTTGCG CGCCG CCG CGGCG TTTGCAGATGCCTCC Nham_3662 4033683 - 4033015 - | hypothetical protein TERM 3707 4034100 - 4034089 - H 80 -2.2 -5.18726 | gap 1 CCGCGACAACAAAAA CGTCC CTG GG-CG GGGTGTCCCGGTGGA TERM 3708 4034643 - 4034623 - g 70 -10.3 -3.59372 | overlap 4034621 4034627 CGAATGCAAAGAAGA GCAACGCGG CAG CCGCGACGC CGGCGCTGCGGATGA TERM 3709 4035640 - 4035620 - g 78 -6.7 -4.57569 | overlap 4035622 4035623 CGATCTGCGGAAAAA CACCGGCGA CGA CCGCCGCCG CACCCACGACATGAA Nham_3663 4034208 - 4037108 + | ribonucleotide-diphosphate reductase subunit alpha Nham_3664 4037099 - 4038349 + | ribonucleotide-diphosphate reductase subunit beta Nham_3665 4038923 - 4038477 - | 3-demethylubiquinone-9 3-methyltransferase TERM 3710 4039343 - 4039304 - g 71 -13.6 -2.55074 | gap 1 GCCAATCTCAAGCCA CTGGAGC-GCCGCCGCCTC ATT GAGACGGCGACCGATCCAA CCGACAAGCGCGCCC Nham_3666 4039055 - 4039525 + | MarR family transcriptional regulator Nham_3667 4040596 - 4039556 - | beta-lactamase-like Nham_3668 4041222 - 4040686 - | hypothetical protein Nham_3669 4041661 - 4041209 - | hypothetical protein Nham_3670 4042131 - 4041670 - | hypothetical protein Nham_3671 4043870 - 4042128 - | twin-arginine translocation pathway signal TERM 3711 4043802 - 4043840 + g 70 -10.2 -3.54424 | opp_overlap 4043774 GGCCGCGCGGGCGAT GCGCGGCAGCG-CGCCGG AGAGG CCGGCGGCGCCGACG-GC TTTCAGGAGGTCGCG Nham_3672 4044443 - 4044117 - | hypothetical protein Nham_3673 4045300 - 4044440 - | sulfur oxidation protein TERM 3712 4044901 - 4044935 + g 74 -2 -4.83615 | overlap 4044902 4044905 TCTCGAGGCACTGGT TCACGGCGAGTTCG AGCGTGA CGACCTTGCCCTGC TTTTTGTCGAAGGTA Nham_3674 4045641 - 4045330 - | sulfur oxidation protein Nham_3675 4046163 - 4045666 - | sulfur oxidation protein TERM 3713 4046204 - 4046229 + r 87 -14.1 -3.35996 | opp_overlap 4046208, overlap 4046209 GTCACAGCGTTTGCA GGAAGTCGACG ACCG CGTCGATTTCC TTGTCAGTGAGAATG TERM 3714 4046209 - 4046224 + r 75 -9 -4.00868 | opp_overlap 4046208, overlap 4046204 AGCGTTTGCAGGAAG TCGACG ACCG CGTCGA TTTCCTTGTCAGTGA Nham_3676 4046561 - 4046190 - | cytochrome c, class I Nham_3677 4046817 - 4047497 + | hypothetical protein Nham_3678 4048202 - 4047705 - | glyoxalase/bleomycin resistance protein/dioxygenase Nham_3679 4049361 - 4048324 - | extracellular solute-binding protein TERM 3715 4049208 - 4049259 + g 85 -14.4 -3.61328 | gap 1, opp_overlap 4049207 4049206 4049238, overlap 4049207 CCACATTCGAAAAGC CGGGCAGGCCGGTGTTGACGCCG CACAGCA CGGCGTC-GCGCCGGAGTGTCCG TTTCAGGGTCTTGGT Nham_3680 4050017 - 4049418 - | ErfK/YbiS/YcfS/YnhG TERM 3716 4049923 - 4049890 - G 72 -12.4 -3.34895 | opp_overlap 4049904 4049921, overlap 4049891 TCGAGTTGGAACGAA TCGTCGGCGATCAG GCCGGG CTGGTCGCCGACGT CAGCCTGCCGTTGCT TERM 3717 4049922 - 4049891 - G 77 -15.9 -2.60723 | opp_overlap 4049904 4049921, overlap 4049890 CGAGTTGGAACGAAT CGTCGGCGATCAG GCCGGG CTGGTCGCCGACG TCAGCCTGCCGTTGC Nham_3681 4050919 - 4050296 - | RNA polymerase sigma factor TERM 3718 4051178 - 4051168 - H 83 -5.4 -4.93877 | CGCCACGAAACAAAA GGAA CCG TTCC CATGGAGAAGATTAT Nham_3682 4051180 - 4052211 + | transposase IS116/IS110/IS902 Nham_3683 4053406 - 4052666 - | two component transcriptional regulator TERM 3719 4052861 - 4052851 - G 79 -8.2 -4.36914 | overlap 4052852 GCTCGCGCGACAAAA CCCG CTT CGGG TTGGCGGCGAAGACT Nham_3684 4055150 - 4053408 - | response regulator receiver sensor signal transduction histidine kinase TERM 3720 4054473 - 4054459 - G 76 -11.4 -3.73775 | GCGACCCCGATGAAA CGGCTG TAG CAGCCG GATCCGGCCAGTACC TERM 3721 4054808 - 4054831 + g 73 -8.1 -4.0802 | CCTGTCCGGGCTGTC CGGTGCGCA GGATGA TGCGCACGG TTTCGTTCTTGAGCT Nham_3685 4057276 - 4055150 - | histidine kinase TERM 3722 4057604 - 4057567 - H 100 -14.1 -3.96148 | gap 1 TGGTCCTATCAGAAA CGCATGACAGCGGGGCAG CCC CGGCCCCGCCGTG-TGCG GAGGGCAAGGCACGA Nham_3686 4057570 - 4058952 + | extracellular solute-binding protein Nham_3687 4059777 - 4059166 - | polyhydroxyalkanoate synthesis repressor PhaR TERM 3723 4059661 - 4059648 - G 76 -8.1 -4.18018 | TCTTTGCATCGAAAA CGAGG AAAT CCTCG CCCTGCTTGACCATC TERM 3724 4060856 - 4060840 - H 73 -11.5 -3.33696 | opp_overlap 4060845 CGCGTCGGGAATCAA CGACGGC GCC GCCGCCG TGGTGCTGATGTCAG TERM 3725 4061349 - 4061329 - H 84 -7.5 -4.79955 | opp_overlap 4061329 4061330, overlap 4061330 ACACTGACAATAAAA CGCCCGG TCTCGTG CCGGGCA TTTTTATCTGCAAGG TERM 3726 4061329 - 4061349 + H 86 -6 -4.96848 | opp_overlap 4061329 4061330, overlap 4061330 ACACTGACAATAAAA CGCCCGGT CTCGT GCCGGGCA TTTTTATCTGCAAGG TERM 3727 4061525 - 4061487 - H 93 -8.3 -5.27335 | gap 2, opp_overlap 4061487 CGCGTCAAACAAAAA GCTGGAGCCCGGCTTTGAT TCC ATCAAAGCCGGAA-C-AGC TCTAGGAGGATGATG Nham_3689 4061543 - 4062268 + | acetoacetyl-CoA reductase TERM 3728 4062368 - 4062399 + F 73 -10.9 -3.36569 | gap 1, opp_overlap 4062366 4062362, overlap 4062366 4062385 TGCTGACAAGCAAGC CGT-CATGCCCGGC CTTGT GCCGGGCATCCACG TCTTTCAAGCATTCC TERM 3729 4062446 - 4062459 + F 72 -9.5 -3.71649 | opp_overlap 4062455, overlap 4062446 ATGGCCGGGATATCT GCGCG AAGA CGCGC TTTGCGCTTTGGCCC Nham_3690 4062495 - 4063361 + | hypothetical protein TERM 3730 4063403 - 4063379 - T 70 -12.1 -2.75064 | overlap 4063376 TTTTCGAGCGAAGCA CGTCCTCGGGC CTG ACCCGAGGATG AATACCGGCTCGAGC TERM 3731 4063450 - 4063474 + T 74 -13.7 -2.5742 | opp_overlap 4063443 4063470, overlap 4063443 4063449 4063447 AACGGAAACCTGGAG CCGGCTTTGAT CTC ATCAAAGCTGG ATATTCCTATTTCCC Nham_3691 4064862 - 4063498 - | major facilitator transporter TERM 3732 4064342 - 4064375 + g 71 -11 -3.53563 | gap 1 CCGATGCGATAGGCG GCGACGTAGCCCGCC ATGCC GGCGGCCTGC-TCGC TTTCCGGCAGGCTCT TERM 3733 4066189 - 4066208 + H 74 -2.1 -4.98255 | overlap 4066191 CAAAGAGAGAACATA TTGGGTT AACGAA AGCCCGA TTTTTATGGTTAACA Nham_3693 4066289 - 4066816 + | peptide deformylase TERM 3734 4066959 - 4066938 - g 74 -13.7 -2.87132 | gap 1, overlap 4066923 TCGCGGCCGTATACA CCCGCGAGGC CAG GCC-CGCGGG CCGCGGCATGAAGCT TERM 3735 4067469 - 4067457 - g 76 -5.5 -4.58395 | overlap 4067465 CCTACGCCGCAAAAA TCGAC AAG GCCGA GGCGCGCATCGACTG fmt 4066841 - 4067773 + | methionyl-tRNA formyltransferase truA 4067893 - 4068630 + | tRNA pseudouridine synthase A Nham_3696 4069364 - 4068804 - | 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase Nham_3697 4070596 - 4069361 - | succinyl-diaminopimelate desuccinylase TERM 3736 4070183 - 4070209 + g 71 -13.6 -2.5547 | overlap 4070182 CAGATATTCCAGCGT GGCGGCGGCGCT GCA GGCGATGCCGCC CTTCATGTCCACGGT dapD 4071517 - 4070672 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase Nham_3699 4072304 - 4071591 - | pyrimidine 5-nucleotidase Nham_3700 4073197 - 4072301 - | acetylglutamate kinase Nham_3701 4073673 - 4073287 - | hypothetical protein Nham_3702 4074323 - 4073670 - | GTPase EngB Nham_3703 4076297 - 4074468 - | putative inner membrane protein translocase component YidC TERM 3737 4075689 - 4075707 + g 70 -11.6 -3.17212 | opp_overlap 4075686 GAACGGATACAACGT CACCGGCG CAC CGCCGGCG TTCGTGACCTCATCC Nham_3704 4076702 - 4076367 - | ribonuclease P protein component rpmH 4076860 - 4076726 - | 50S ribosomal protein L34 Nham_3706 4077183 - 4078661 + | histidine kinase Nham_3707 4083354 - 4079521 - | ATPase TERM 3738 4080604 - 4080618 + g 95 -11.4 -4.56597 | ACCACGACGGCTTTC GACGCC CTT GGCGTC TTTTTCCGAACGCGA TERM 3739 4082366 - 4082350 - G 70 -10.1 -3.55622 | GCCAAGGCCGGGAAA GGCACCT CGA AGGCGCC AGATTCGGTTGAGCT Nham_3708 4084278 - 4083391 - | helicase-like Nham_3709 4088090 - 4084170 - | hypothetical protein TERM 3740 4087319 - 4087338 + gr 72 -9.2 -3.68351 | overlap 4087336 AAATAGATTCATTCG CGCCATCG CTCA CGACGGCG TTTCCCTCCTCGAAC TERM 3741 4087455 - 4087427 - GR 75 -3.9 -4.71828 | gap 1, opp_overlap 4087439, overlap 4087422 ACGGCAGGAACAAAA GGAACTCGGCAG GGAACT CTGC-AAGCTCC TTTTTTAATCGATCG TERM 3742 4087439 - 4087455 + gr 81 -2.2 -5.1675 | opp_overlap 4087427 4087422 AAAGGAACTCGGCAG GGAACT CTGCA AGCTCC TTTTTTAATCGATCG Nham_3710 4089204 - 4088926 - | hypothetical protein TERM 3743 4090191 - 4090178 - g 86 -8.1 -4.58395 | GCGACGGCCGAAAAA GGAGG GCTG CCTCC GGGGCATGCGGTCGA Nham_3711 4089245 - 4090258 + | glycoside hydrolase family protein TERM 3744 4091343 - 4091306 - g 73 -6.9 -4.27117 | gap 1, overlap 4091307 TCGGCACAAGACAAA GGCGCATCAGCACCGCAC CGG ATGCGGCGCTGGC-CGGC TGCGAGTAATCGAAC Nham_3712 4090267 - 4091352 + | peptidase S1 and S6, chymotrypsin/Hap TERM 3745 4091372 - 4091426 + T 82 -10.4 -4.14472 | opp_overlap 4091382 ACAATATCGCCCATC GAGCCGCAAACGTCCTCGGCGGCGCG GTG CGGTCTGCCGATGACGAGTGCGCCGC TTTTGGGCCTCTTAG Nham_3713 4092226 - 4091438 - | hypothetical protein TERM 3746 4091840 - 4091852 + g 72 -7.7 -4.19953 | GCTGCCACCGAAGCC GTGCT GAA AGCAC TTTTGCAATTCCCTG TERM 3747 4092437 - 4092457 + H 70 -11.9 -2.72661 | TGGTCTGTTGCGCTG CCTGCTTTG GAA CGAAGCAGG TGGTTGGGGATGCTG Nham_3714 4092467 - 4093966 + | integrase catalytic subunit Nham_3715 4093966 - 4094829 + | IstB-like ATP-binding protein Nham_3716 4096392 - 4094809 - | TonB-dependent receptor, plug Nham_3717 4096855 - 4096484 - | hypothetical protein TERM 3748 4096929 - 4096974 + H 87 -12.7 -3.7948 | gap 1, overlap 4096919 4096934 CGTCCCGAGCGTCCC GCGTCGATCGTGCGTTCGAT GAGTGAA AGCGAACGCACGATCT-CGC TTTGGTGCATCTTCA TERM 3749 4096934 - 4096970 + H 81 -15.3 -2.68279 | overlap 4096919 4096929 CGAGCGTCCCGCGTC GATCGTGCGTTCGAT GAGTGAA AGCGAACGCACGATC TCGCTTTGGTGCATC TERM 3750 4097095 - 4097070 - H 71 -11.1 -3.29144 | opp_overlap 4097060 4097075, overlap 4097071 4097075 CGATCGGGTGGAGAA GCGAAGGGCGC GTCA GCGCCCTTCAT ACCCCTTCCCTTTGA TERM 3751 4097094 - 4097071 - H 78 -14.6 -2.57344 | opp_overlap 4097060 4097075, overlap 4097070 4097075 GATCGGGTGGAGAAG CGAAGGGCGC GTCA GCGCCCTTCA TACCCCTTCCCTTTG TERM 3752 4097075 - 4097090 + H 73 -11.8 -3.16742 | opp_overlap 4097071 4097070 4097075, overlap 4097060 GGGTGGAGAAGCGAA GGGCGC GTCA GCGCCC TTCATACCCCTTCCC TERM 3753 4097090 - 4097075 - H 75 -11.8 -3.23274 | opp_overlap 4097075 4097060, overlap 4097071 4097070 GGGTGGAGAAGCGAA GGGCGC GTCA GCGCCC TTCATACCCCTTCCC Nham_3719 4097687 - 4099948 + | TonB-dependent siderophore receptor TERM 3754 4099981 - 4100005 + G 84 -15.7 -3.36671 | opp_overlap 4099977 4099974 4099973 TCGATAATCGACCCC GCTACCGGCGC CCG GCGCTGGTGGC TTGTCGCGTTGCGCT TERM 3755 4100119 - 4100142 + G 76 -9.6 -3.98312 | gap 1 GCCCGCAGCGAAGCG GTCGCAC-TCG TTT CGATGTGCGGC TTTGGATTTTATCTA Nham_3720 4099951 - 4100265 + | hypothetical protein Nham_3721 4100267 - 4101826 + | PepSY-associated TM helix Nham_3722 4101819 - 4102139 + | hypothetical protein TERM 3756 4103002 - 4102987 - g 95 -10.4 -4.63218 | TTTTTGCCAACAAAA GCTGCG ACCG CGCAGC GCAGTACGCCTGTCA Nham_3723 4102230 - 4103765 + | hypothetical protein TERM 3757 4104770 - 4104820 + G 73 -13.3 -3.16881 | gap 1, opp_overlap 4104769 4104767 4104772, overlap 4104772 4104772 4104784 TATGTCGGAACACAT TATGTCGGCGACGTTCTCGG-CGG AGCC TCGACCGGGATTGTCGCCGCCATG TTGGTCCGCTCACTC TERM 3758 4104772 - 4104818 + G 76 -13.7 -3.14602 | gap 1, opp_overlap 4104769 4104767 4104772, overlap 4104772 4104770 4104784 TGTCGGAACACATTA TGTCGGCGACGTTCTCGG-CGG AGCC TCGACCGGGATTGTCGCCGCCA TGTTGGTCCGCTCAC Nham_3725 4104407 - 4104883 + | phosphoesterase, PA-phosphatase related Nham_3726 4105342 - 4104920 - | MerR family transcriptional regulator Nham_3727 4105411 - 4107546 + | heavy metal translocating P-type ATPase Nham_3728 4108828 - 4107929 - | periplasmic binding protein Nham_3729 4109616 - 4108834 - | ABC transporter related Nham_3730 4110638 - 4109613 - | transport system permease protein TERM 3759 4110699 - 4110676 - R 74 -11.6 -3.56594 | opp_overlap 4110676, overlap 4110666 4110677 TGAAAGCCGTGCAAA TCGCCGGGCC GGCC GGCCCGGCAG CATAGTTCGGGAGAC TERM 3760 4110698 - 4110677 - R 83 -15.1 -2.73635 | opp_overlap 4110676, overlap 4110666 4110676 GAAAGCCGTGCAAAT CGCCGGGCC GGCC GGCCCGGCA GCATAGTTCGGGAGA Nham_3731 4111315 - 4111031 - | hypothetical protein Nham_3732 4112066 - 4111581 - | alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen Nham_3733 4112843 - 4112265 - | hypothetical protein TERM 3761 4113024 - 4113008 - R 81 -8.7 -4.28254 | CTCTAAGATGGAAAA GGTCGAC GTC ATCGACC GAAATCAGAATCCGC Nham_3734 4114790 - 4113108 - | acyl-CoA synthetase TERM 3762 4114141 - 4114121 - G 72 -14 -2.78216 | overlap 4114118 TATTGCGATGAAGCA GCGTCGCG CCCTT CGCGACGC CGGTGGTGCCGCCGG Nham_3735 4116321 - 4114954 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 3763 4115341 - 4115305 - G 81 -13.6 -3.61398 | opp_overlap 4115313 GCCGGTTGCGAAGAA CGACATCACGGCGGCG CTGGT CGCCGTCGTGTTGGCG GCCACATCGTCATCC Nham_3736 4118283 - 4116502 - | cyclic beta-1,2-glucan ABC transporter TERM 3764 4118314 - 4118292 - R 81 -4 -5.1287 | overlap 4118293 TCGACATCGAAAAAA CGCTCTTGCG GAT CGCAACGGCA GCATTCCGGCAGCGC TERM 3765 4118340 - 4118355 + r 90 -10.4 -4.64676 | AGCGCGAACAGATCG GCGGCA CTTG TGCCGC TTTTATTCGGCCTGC Nham_3737 4119419 - 4118358 - | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components TERM 3766 4118443 - 4118419 - G 70 -9.9 -3.63744 | opp_overlap 4118418 4118419, overlap 4118403 4118417 CTGTCGTCGAAAATA TCCGCGACCGC CGG GCGTTTGCGGA ATTTGAAATCGTCGG TERM 3767 4119840 - 4119872 + G 71 -12.7 -3.07113 | gap 1 CATCGCCGTCATTAT CGCGGCGG-TGGCG ATGCTG CGGCAGCCGCCGCG TTCGCTGGGATCATC Nham_3738 4119510 - 4120037 + | hypothetical protein TERM 3768 4120067 - 4120103 + F 80 -10.8 -4.07568 | gap 1, overlap 4120068 GGGCCAAAGAGCGGA TGACGGACGCCGGCTGC GATG GCGGTCGGCGTC-GCCG TTTTGGACGCCGACC TERM 3769 4120068 - 4120102 + F 73 -12.1 -3.04398 | gap 1, overlap 4120067 GGCCAAAGAGCGGAT GACGGACGCCGGCTGC GATG GCGGTCGGCGTC-GCC GTTTTGGACGCCGAC Nham_3739 4120316 - 4120912 + | hypothetical protein Nham_3740 4121225 - 4121413 + | hypothetical protein Nham_3741 4121542 - 4121829 + | hypothetical protein Nham_3742 4122024 - 4122689 + | hypothetical protein TERM 3770 4122963 - 4122935 - T 78 -8.9 -4.2331 | overlap 4122936 AATCAAAATCATAAA GCCCGCTTCTGAT TCC ATCAGAAGCGAAA AGGCTCTAGCTAAAT TERM 3771 4122962 - 4122936 - T 73 -12.4 -3.12359 | overlap 4122935 ATCAAAATCATAAAG CCCGCTTCTGAT TCC ATCAGAAGCGAA AAGGCTCTAGCTAAA Nham_3743 4123442 - 4122987 - | ribonuclease H TERM 3772 4123125 - 4123143 + g 77 -3.7 -4.83615 | overlap 4123114 GAGCCGCTGCCACAG GTCGGCG TTCTT CACCGGC TTTTTGTCGGCGGTG Nham_3744 4124419 - 4123439 - | homoserine kinase TERM 3773 4123624 - 4123595 - G 86 -13.5 -3.96148 | gap 1, opp_overlap 4123601 4123621 4123622, overlap 4123573 CCGCGTCAGCAGAAA CCGCAGCGCGGCGC CGC GCGCCA-GCAGCGG CAGCGCCGCCTGTTC TERM 3774 4123938 - 4123917 - G 73 -6.5 -4.36914 | overlap 4123918 TCGGCCTTGAGAAAA TCGTGCAAC CCAT GCTGCACGG TATCGATGCAAGGCG Nham_3745 4125700 - 4124726 - | hydroxymethylbutenyl pyrophosphate reductase TERM 3775 4125725 - 4125703 - H 76 -12 -3.35679 | overlap 4125721 4125724 TGGTGGCATTCATAA GGCGATCCGG GGA CCGAATCACC CCACACCGGCAGGGC TERM 3776 4126507 - 4126463 - g 76 -6.4 -4.4078 | gap 2, overlap 4126468 CGCGGCCAAGGAAAA GCCAACCGATCAGCAGTATGGC GGC GCCACCCTGCTG-CCGGC-GTC CGAGACCACGCGCAA TERM 3777 4126503 - 4126468 - g 76 -12.6 -3.41708 | gap 1, overlap 4126463 CCAAGGAAAAGCCAA CCGATCAGCAGTATGGC GGC GCCACCCTGCTG-CCGG CGTCCGAGACCACGC TERM 3778 4126578 - 4126551 - g 86 -8.4 -4.66609 | gap 1, opp_overlap 4126551 GAGCCGACGGAAAAA CAGCG-CGACGAT CTC AACGTCGACGCCG TGTTCGCCAAGCTGA Nham_3746 4125936 - 4126640 + | hypothetical protein Nham_3747 4127150 - 4126890 - | hypothetical protein TERM 3779 4127279 - 4127235 - R 72 -5.7 -4.54727 | opp_overlap 4127242, overlap 4127242 CGCGTCAAATCAAAA TCATAGAGCCCCACTTCTGGT TTC ATCAGAAGTGGAAGGCTTTGA CGACTGTTCGAACCC Nham_3748 4129335 - 4127410 - | AMP-dependent synthetase and ligase TERM 3780 4128244 - 4128265 + g 80 -5.7 -4.72272 | opp_overlap 4128247, overlap 4128247 ATCATATTTGCGGAT GAAGGCCCC GTCC GGGTCCTCC TTTTTGATGGCGCGG TERM 3781 4129512 - 4129534 + r 71 -12 -2.8779 | overlap 4129514 GTGCCGCAATGGGCC GATCGACGCC GGC GGCATCGATC TCTCGTCTCACTTCT TERM 3782 4129604 - 4129577 - R 85 -14.9 -3.02263 | gap 1, opp_overlap 4129574 4129579 4129583 ACATCTGCGGCAAGA CGGGACGCGGCC GCAAT GGCCG-GTCCCG CAATTGGCTACCGCT Nham_3749 4130526 - 4129612 - | AAA ATPase, central region TERM 3783 4130360 - 4130344 - G 70 -12.3 -3.17685 | opp_overlap 4130344 4130341 GAACGACATATGCAA CGTCGGA GTC TCCGACG TCAGTTCCATTTTCT TERM 3784 4130614 - 4130587 - R 100 -14.9 -4.36914 | GCTCGGGGGAGAAAA GCTCCGTCGCC ATGCGA GACGACGGAGC AGTACATCCGGAACT Nham_3750 4131104 - 4130679 - | ribulose-bisphosphate carboxylase rbcL 4132584 - 4131118 - | ribulose bisophosphate carboxylase TERM 3785 4131400 - 4131454 + g 81 -13.8 -3.63515 | gap 3, opp_overlap 4131429 CTCACCGAGATGCTG GATGA-GCTGGT-GCATCTGGCCGGCA TGAA TGCCG-CCGGAAGCAACCGGCATCATC TTGTTGAGGCTCGCC TERM 3786 4131941 - 4131920 - G 79 -10.9 -3.8647 | ATGCAGTAGAGGAAA CGTTCACGC CAGT GCATGAACG GCTGCGAGTTGATGT Nham_3752 4133731 - 4132646 - | fructose-1,6-bisphosphate aldolase TERM 3787 4133762 - 4133788 + r 70 -2.3 -4.72272 | opp_overlap 4133765 4133767 4133768, overlap 4133767 4133769 ATTTGGCTGCCCTGA TAAGA-CGTCGCG CTT CGCG-CGATCATA TTTTTGGTCACGCCC Nham_3753 4134725 - 4133853 - | phosphoribulokinase Nham_3754 4135783 - 4134746 - | fructose-1,6-bisphosphatase TERM 3788 4135799 - 4135829 + H 77 -7.7 -4.386 | gap 2, overlap 4135808 TCAGTTGCCTCCCCT CGGCCACGATCGGCA GAA TGCCGATT-TG-CCG TTTTCTAGAGCGTTG TERM 3789 4135808 - 4135822 + H 75 -10 -3.786 | overlap 4135799 TCCCCTCGGCCACGA TCGGCA GAA TGCCGA TTTGCCGTTTTCTAG TERM 3790 4136533 - 4136550 + G 85 -5.5 -5.00616 | overlap 4136518 4136535 CCGGGTTCCGGCACC CGGTTCC TGAT GGAACAG TTTTTTGAGAACAGC Nham_3755 4135915 - 4136880 + | LysR family transcriptional regulator TERM 3791 4137555 - 4137571 + G 70 -10.1 -3.55444 | CACCCACGCCGACAT GGTCGAG GTG CTCGGCC TTTACGGCATCACAG Nham_3756 4137370 - 4137948 + | hypothetical protein TERM 3792 4138202 - 4138231 + G 78 -15.7 -2.71483 | gap 1, opp_overlap 4138192, overlap 4138225 AGAATTTCGCGGCGG CGGCCCGCCTCCCC GGC GCGGAGGCGG-CCG TGCTTCGGCCGGTCT Nham_3757 4137949 - 4138818 + | hypothetical protein Nham_3758 4138799 - 4139077 + | hypothetical protein Nham_3759 4139084 - 4140136 + | hypothetical protein Nham_3760 4140553 - 4140332 - | hypothetical protein Nham_3762 4141990 - 4141778 - | hypothetical protein Nham_3763 4142333 - 4142067 - | hypothetical protein TERM 3793 4143085 - 4143064 - R 70 -4.3 -4.65263 | gap 1, overlap 4143066 ACGCGTCAAAACAAA CAGCTGGGGC CCG GCCAC-GCCG GCAGGTCCGCAACGA Nham_3764 4143878 - 4143054 - | hypothetical protein Nham_3765 4147213 - 4143950 - | DNA polymerase III, alpha subunit Nham_3766 4148670 - 4147210 - | hypothetical protein TERM 3794 4147628 - 4147608 - G 73 -8.2 -3.97368 | opp_overlap 4147609, overlap 4147609 GTTCGAACCGATAAA GCCGGGTC TCACC GACCCGGT TTGAGAGGATGTCGA TERM 3795 4147609 - 4147627 + g 75 -11.7 -3.55071 | opp_overlap 4147608 4147609 TTCGAACCGATAAAG CCGGGTC TCACC GACCCGG TTTGAGAGGATGTCG Nham_3767 4149394 - 4148651 - | hypothetical protein Nham_3768 4149580 - 4151649 + | UvrD/REP helicase Nham_3769 4151740 - 4152768 + | transposase IS116/IS110/IS902 TERM 3796 4153273 - 4153253 - g 78 -4.6 -4.7373 | GGATGCCACCAAAAA GCGCGCAG AGAAA CTGCAGGC CAAGGGCAAGACTGT Nham_3770 4153050 - 4153505 + | hypothetical protein TERM 3797 4153913 - 4153927 + T 73 -3.4 -4.7373 | opp_overlap 4153886 4153885 4153908 CCAAAAGGAACCAGC CTGGCC ACT GGACGG TTTTTACTCCGCTCG Nham_3773 4155795 - 4154380 - | amino acid/peptide transporter Nham_3775 4156546 - 4156193 - | hypothetical protein Nham_3776 4156558 - 4156893 + | hypothetical protein Nham_3777 4156898 - 4157467 + | hypothetical protein Nham_3778 4157811 - 4158236 + | hypothetical protein Nham_3779 4158233 - 4158997 + | metallophosphoesterase Nham_3780 4159071 - 4159448 + | hypothetical protein TERM 3798 4160675 - 4160650 - g 71 -6.1 -4.2535 | gap 1, opp_overlap 4160669 AGATGAGATCGAAAA GGCCGGCACTCG TAC CGACTAC-GGCC GGCTGTGGGACTGCC Nham_3781 4159445 - 4161061 + | ATPase TERM 3799 4161595 - 4161567 - g 70 -8 -4.04415 | GCAAATAACACCAAA TTGGCCGAGGCC CAGGC GGCCCAGGCCGA GATCATGCGTAAGTC Nham_3782 4161219 - 4162502 + | hypothetical protein TERM 3800 4164415 - 4164400 - gf 100 -4.7 -5.4756 | overlap 4164387 AACCCGAATAAAAAA GCCAT TCGAGC ATGGC ACACGCCTAACGATT TERM 3801 4164595 - 4164613 + GF 85 -5.9 -5.00616 | opp_overlap 4164591, overlap 4164591 4164596 AGATCTTGAAATCGT TGCGGAC GATTG GTCCGCC TTTTTTAGACACGCA Nham_3783 4163252 - 4166092 + | histidine kinase Nham_3784 4166064 - 4167206 + | response regulator receiver domain-containing protein TERM 3802 4167240 - 4167204 - g 100 -6.6 -5.88471 | gap 1, overlap 4167207 GATGACGAAAAAAAA TAACTACGACGACCGTC GCAG GACGGCCGCCACAGC-A CTTAGGTCGTTAGGC TERM 3803 4167238 - 4167207 - g 100 -13 -4.99643 | overlap 4167204 GACGAAAAAAAATAA CTACGACGACCGTC GCAG GACGGCCGCCACAG CACTTAGGTCGTTAG Nham_3785 4167190 - 4167924 + | hypothetical protein TERM 3804 4169070 - 4169059 - f 85 -3 -5.35815 | opp_overlap 4169059 CACATCAAACAAAAA TTAC GACT GTAA TGTTAGAGCCTGTTT Nham_3788 4169169 - 4169966 + | transposase, IS4 Nham_3789 4170306 - 4169986 - | hypothetical protein TERM 3805 4170714 - 4170697 - g 70 -7.7 -3.99324 | gap 1, opp_overlap 4170698, overlap 4170698 GGCTATCAGGACAAA GCG-AGCC GCT GGCTTCGC CGCCCGCTCACCGAG Nham_3790 4170391 - 4170828 + | hypothetical protein TERM 3806 4171022 - 4170971 - g 73 -8.7 -4.07568 | gap 2, overlap 4170972 CTGCGTCCTCGAAAA GCTCGTCCATGTCGAGGATCCGGCA CTCT TGCCGGAGC-TCGTCATGGTCGC-C TACGAGATTTCCAAG Nham_3791 4170828 - 4171289 + | hypothetical protein TERM 3807 4171930 - 4171954 + T 75 -12.1 -3.17392 | GGCGTCGCTTGCAGG CGCGGGGGTTC CGG GGATCCCTGCG TTCGGTTGGCGAGTG Nham_3793 4172617 - 4172075 - | hypothetical protein Nham_3794 4173128 - 4173490 + | PRC-barrel TERM 3808 4173733 - 4173776 + T 95 -17.5 -3.49475 | TCGTTCCCGCGGCCT TCGCGCGGCTCTGCGAG TTGCATCTTC CTCGCAGGGCCGCGCAA TTCTGTGAACCTGCG Nham_3795 4174603 - 4174100 - | hypothetical protein TERM 3809 4174546 - 4174583 + g 75 -4.2 -4.69053 | gap 2 TGGTCACAGCTTGTT CCTCCATTGCGTGGGCAT TGCG AAGCC-ACGCCATG-AGG TTTTCTTCGATCCTG TERM 3810 4176138 - 4176122 - H 72 -9.3 -3.71873 | opp_overlap 4176117 4176116 4176136 GGATCGACACCCAAA GGCGGGC ACA GCACGCC GTCGGATTTCGCCAG Nham_3800 4178080 - 4178391 + | hypothetical protein TERM 3811 4178772 - 4178790 + F 82 -6.6 -4.82901 | CATCGCATGCGGATA TCGTCGGG GAC CTCGTCGA TTTTTCTGGCGGGAG TERM 3812 4179110 - 4179127 + F 87 -9.8 -4.57569 | AAGCGCAACGCCTGG GCCGCG GTGAGG CGCGGC TTTTTCAGCCGCTGC TERM 3813 4179717 - 4179728 + G 73 -3.6 -4.81357 | opp_overlap 4179712, overlap 4179713 CTCCGACCAACCCGC GCCG CGCT TGGC TTTATTTTCTGATGT TERM 3814 4180865 - 4180891 + G 83 -15.2 -3.19463 | opp_overlap 4180865 GGTGCTGAAGACAAA CACGTCGTCGTC GAT GGCGATGACGTG TTCATCGATGGTGGG TERM 3815 4180891 - 4180865 - g 84 -10.8 -4.1891 | opp_overlap 4180865 GGTGCTGAAGACAAA CACGTCGTCGTC GAT GGCGATGACGTG TTCATCGATGGTGGG Nham_3802 4179518 - 4181242 + | signal transduction histidine kinase TERM 3816 4182827 - 4182877 + G 78 -11.8 -3.72984 | gap 1, overlap 4182816 4182815 CCTCGCGGAGCGCCG CT-GCAATTGCGGTGGCGCCAGC ATTGTC GCTGCCGCCGCCGCGACGGCCAG TTTGGGTGCTTATCA Nham_3805 4182488 - 4182904 + | hypothetical protein TERM 3817 4184265 - 4184290 + G 83 -14.8 -3.40403 | TGCTGTGATGCATGA GGTGTCCACC AAAATA GGTGGACACC TTGTGATGGAAGACG Nham_3806 4184257 - 4184769 + | transposase IS3/IS911 Nham_3807 4184750 - 4185103 + | IS66 Orf2 like TERM 3818 4186212 - 4186199 - g 83 -9.5 -4.25458 | opp_overlap 4186200 4186211 AAGGCCAGGAAGAAA GGCGG CGGT CCGCC GGAGCAGGCGCTTCG Nham_3808 4185158 - 4186732 + | transposase IS66 TERM 3819 4186773 - 4186759 - T 75 -8.5 -4.05788 | GCTTCCGAAATCAAA CGCCG AAAGG CGGCG TCAACGTGCGGGGAA Nham_3809 4188140 - 4187295 - | hypothetical protein TERM 3820 4187409 - 4187393 - G 78 -5 -4.73388 | overlap 4187395 AACCCGGATGAAAAA CGCACC CCGCC GGAGCG AACCTGTTCCTGAAG Nham_3810 4188442 - 4188774 + | hypothetical protein Nham_3811 4188771 - 4189145 + | hypothetical protein Nham_3813 4190340 - 4189900 - | hypothetical protein Nham_3814 4190907 - 4190557 - | PRC-barrel TERM 3821 4190950 - 4190937 - R 81 -3.7 -5.1675 | overlap 4190938 4190939 TTAGGGAGGAAAAAA GCGGC CGGT GCGGC AAATGTTCCCCGGCG TERM 3822 4191015 - 4190994 - R 71 -7.1 -4.11394 | opp_overlap 4190997, overlap 4190995 ATTCCATGGCCAAAA CCGCCGCGG CGTT CGGCTGCGG TCGTATGAAAACGAG Nham_3815 4191343 - 4191161 - | hypothetical protein TERM 3823 4191397 - 4191369 - H 100 -7.3 -6.15259 | opp_overlap 4191370, overlap 4191370 TAATGCAAAAAAAAA CGCGCCTCTCCTC GCC GTAGAGAAGCGCT CTTGTTTTCCTATAA TERM 3824 4191396 - 4191370 - H 85 -10.8 -4.26715 | opp_overlap 4191370, overlap 4191369 AATGCAAAAAAAAAC GCGCCTCTCCTC GCC GTAGAGAAGCGC TCTTGTTTTCCTATA TERM 3825 4191483 - 4191468 - H 77 -10.4 -3.84246 | opp_overlap 4191468 GTTCCAATGAGCAAA GCCCCA GCTT TGGGGC TTTCGTTCGGGCTAG TERM 3826 4191468 - 4191483 + H 77 -10.4 -3.91084 | opp_overlap 4191468 GTTCCAATGAGCAAA GCCCCA GCTT TGGGGC TTTCGTTCGGGCTAG TERM 3827 4192622 - 4192607 - H 83 -8.2 -4.61868 | TAGGGATATAGAAAA CCCCGC CGGA GCGAGG CTGGAAGGGATCCGC TERM 3828 4192855 - 4192840 - H 100 -11.8 -4.78848 | GCCTCAAATAGAAAA CCCCGC CGGA GCGGGG CGAATTAGGCAGCCG TERM 3829 4192970 - 4193000 + H 93 -9.5 -4.72272 | TCCCGAACCCGATCA GGCCCGCATGTGG CGTCT CCCCCGGCGGGCC TTTTTGGTGGCCCCG TERM 3830 4193622 - 4193648 + H 100 -10.1 -4.93547 | CATGAAGCTCCTCGA CCCGTCGGTGA ACCCC TCGTCGGCGGG TTTTTGGTTAGTTGC TERM 3831 4194652 - 4194616 - H 70 -4.5 -4.48713 | gap 2, overlap 4194617 4194618 4194620 GTCATCAACAACAAA GGCAGCGCGGCAAGAAA ATCTA TTCCCTGC-ACGC-GCC GGAGATCGAATGCAT TERM 3832 4194955 - 4194936 - H 100 -12.8 -5.04325 | CTGAAACGATAAAAA CCCGACGC CGAA GCGCCGGG CCAAGTCAGGAAGGA Nham_3818 4195228 - 4196229 + | signal transduction histidine kinase Nham_3819 4196429 - 4196668 + | hypothetical protein TERM 3833 4196822 - 4196809 - T 100 -9.5 -5.10933 | TTAGTTAAAAGAAAA CCCGC CGGA GCGGG TTGACGAGCCTAGCG TERM 3834 4197206 - 4197224 + T 100 -9.5 -5.08824 | GAACCACTGCCTTAG GCCCGCT TTTAC GGCGGGC TTTTTTGGCTGGAAG Nham_3822 4199302 - 4198985 - | hypothetical protein Nham_3823 4199475 - 4199738 + | hypothetical protein TERM 3835 4199742 - 4199763 + F 78 -3.5 -5.06414 | opp_overlap 4199744, overlap 4199743 4199744 CGTGCACGATAAAAA AACCCGCCG GGCA TGGCGGGAA TTTTTGTTAGACCGC TERM 3836 4199761 - 4199744 - f 100 -9.8 -5.67063 | opp_overlap 4199744 4199743 4199742 TGCACGATAAAAAAA CCCGCC GGGCAT GGCGGG AATTTTTGTTAGACC Nham_3825 4200725 - 4201114 + | transposase IS3/IS911 Nham_3826 4201111 - 4202091 + | integrase catalytic subunit Nham_3827 4203738 - 4202575 - | hypothetical protein TERM 3837 4205574 - 4205564 - g 78 -6.8 -4.56597 | overlap 4205565 TCGCGCGCCTAAAAA GCGA CAA TCGC GCTGCCGGGGGACTG Nham_3828 4203949 - 4205763 + | hypothetical protein Nham_3829 4205760 - 4207028 + | hypothetical protein TERM 3838 4207116 - 4207129 + F 83 -8.1 -4.60487 | opp_overlap 4207116 GTGTCGAGGTGCAAA CCGGT TTCT ACCGG TTTTTCAGACTAGTG TERM 3839 4207611 - 4207621 + G 85 -3.2 -5.26875 | CTTCCAGACTAACGG GTTC TTT GAGC TTTTTTCGTTCAAGA Nham_3830 4207225 - 4208307 + | hypothetical protein Nham_3831 4208813 - 4208310 - | hypothetical protein TERM 3840 4208905 - 4208925 + H 72 -4.8 -4.56597 | gap 1, opp_overlap 4208898, overlap 4208909 GACAGGAACCATGCG GAATCCTCT TGGC AGAGG-TTC TTTTTGGACACCCCC TERM 3841 4208909 - 4208922 + H 72 -6.7 -4.40561 | opp_overlap 4208898, overlap 4208905 GGAACCATGCGGAAT CCTCT TGGC AGAGG TTCTTTTTGGACACC TERM 3842 4209022 - 4208993 - H 74 -13.5 -2.52464 | CTTGCGTCGAATTGA GGGACGGGCGAGC GTTT GCTCGCTCACCCC TGATCCGCTCCAACA Nham_3833 4209642 - 4210931 + | hypothetical protein TERM 3843 4210960 - 4210929 - T 93 -8.7 -4.82901 | opp_overlap 4210928 4210931 4210936 4210938, overlap 4210931 GTCCCGCCAGAAAAA TAGGAGAGGGAGC GGCTAT GCTCTCTCTCCTG GTGTGATCGCTAAAT TERM 3844 4210958 - 4210931 - T 85 -11.3 -4.03995 | opp_overlap 4210928 4210931 4210936 4210938, overlap 4210929 CCCGCCAGAAAAATA GGAGAGGGAGC GGCTAT GCTCTCTCTCC TGGTGTGATCGCTAA TERM 3845 4210931 - 4210958 + T 78 -14.2 -2.66964 | opp_overlap 4210931 4210929, overlap 4210928 4210936 4210938 CCCGCCAGAAAAATA GGAGAGGGAGCG GCTA TGCTCTCTCTCC TGGTGTGATCGCTAA Nham_3834 4211377 - 4210970 - | hypothetical protein TERM 3846 4211875 - 4211865 - g 71 -8.2 -3.84406 | overlap 4211850 4211866 TGCGGAGCACAAGAA GCGC GCC GCGC GAATGTACGATTGCG Nham_3835 4211704 - 4212801 + | replication protein Nham_3836 4212874 - 4213215 + | hypothetical protein Nham_3837 4213289 - 4213786 + | hypothetical protein Nham_3838 4213795 - 4215705 + | cell divisionFtsK/SpoIIIE TERM 3847 4215757 - 4215707 - T 74 -13.9 -2.53894 | opp_overlap 4215707 4215708 4215719, overlap 4215706 ATGATCATGAGTAAT CGGCGAAGCCG-TGAGCACGGCCGC GCA GCGGCCGCGCGCAGCGGCGA-GCCA TTCTCCTTGATGTAT TERM 3848 4215708 - 4215756 + T 73 -13 -2.7281 | opp_overlap 4215707 4215706, overlap 4215707 4215719 TGATCATGAGTAATC GGCGAAGCCG-TGAGCACGGCCGC GCA GCGGCCGCGCGCAGCGGCGA-GCC ATTCTCCTTGATGTA Nham_3839 4216258 - 4215785 - | hypothetical protein TERM 3849 4216298 - 4216342 + H 88 -13.4 -3.67792 | gap 1, overlap 4216299 ATCTTTGCGAGGTCA AGCCGGCGGGTGGGCGGGCGC GTAA GCGCACGCACGCTCG-CGGCA TTTCACTCGATGTCG TERM 3850 4216299 - 4216341 + H 87 -16.9 -2.80354 | gap 1, overlap 4216298 TCTTTGCGAGGTCAA GCCGGCGGGTGGGCGGGCGC GTAA GCGCACGCACGCTCG-CGGC ATTTCACTCGATGTC TERM 3851 4216435 - 4216452 + H 100 -9.8 -5.45802 | TGACAGAACCAGCAG CCCCGC CTACAA GCGGGG TTTTTCTTTTCCGCC Nham_3840 4216668 - 4217009 + | hypothetical protein Nham_3841 4219671 - 4216984 - | hypothetical protein TERM 3852 4220105 - 4220081 - g 72 -4.2 -4.64861 | gap 1, overlap 4220082 GCTTTTCAAAAGAAA TCGACG-AGCG GGAT CGCTACGCCGC AGCGACACATTGACT Nham_3842 4219811 - 4220182 + | hypothetical protein Nham_3843 4220182 - 4220520 + | XRE family transcriptional regulator TERM 3853 4221109 - 4221098 - g 72 -4.4 -4.56597 | overlap 4221100 4221101 4221105 CGCGTCGCGGAAAAA GATC AGAC GATC GAATCGATGGCCCGC Nham_3844 4220543 - 4221856 + | hypothetical protein TERM 3854 4222306 - 4222292 - g 83 -7.1 -4.84642 | opp_overlap 4222291 4222292 TCGAAATGAAGAAAA GCAGC GAAAA GCTGC ATCTTCATTACCAGC TERM 3855 4223366 - 4223346 - g 77 -2.5 -5.01732 | gap 1 AATGCTGGCAAAAAA GCTGGCCC TAGACG AGGCC-GC CGATGTTTTGGAGCG Nham_3845 4222057 - 4224993 + | DNA modification methyltransferase-related protein TERM 3856 4225014 - 4224989 - T 72 -4.7 -4.56775 | opp_overlap 4224996 ATGCTCCTGTAAAAA CGTGAAATCGT AAAC ACGATTTTCCG GCCCTATCTGTTCGT Nham_3846 4225255 - 4225031 - | hypothetical protein Nham_3847 4225827 - 4225252 - | resolvase-like protein TERM 3857 4226205 - 4226220 + H 73 -3.2 -4.7871 | gap 1, opp_overlap 4226205, overlap 4226216 GGCGAAGCCGAAGGA CCGCTGG CAA TC-GCGG TTTTTCCTCGTCATT TERM 3858 4226632 - 4226608 - H 77 -2.7 -5.14563 | opp_overlap 4226622 GGTTCCACCAAAAAA GATGGGGCAGC GTT GCTGTCGGATC AGCCTCTTGATCATC Nham_3848 4226947 - 4227210 + | hypothetical protein Nham_3849 4228480 - 4227449 - | hypothetical protein Nham_3850 4231107 - 4228762 - | complement C1q protein TERM 3859 4229512 - 4229499 - G 83 -6.7 -4.83169 | AGTTGTCGATAAAAA GACTG TTAT CAGTC CACTTATATATGGCC Nham_3851 4231676 - 4231107 - | hypothetical protein Nham_3852 4232939 - 4231992 - | ATP dependent DNA ligase TERM 3860 4233264 - 4233243 - R 100 -18.7 -4.72272 | overlap 4233226 GTGGGTCAGCAAAAA CCCGCCGGG ATCT CCCGGCGGG TACCAATAATCAGTG Nham_3853 4233640 - 4233281 - | PRC-barrel Nham_3854 4234147 - 4233848 - | hypothetical protein TERM 3861 4234709 - 4234727 + r 70 -2.2 -4.82901 | CGGTCATGATTCCAA CGGGTAGG TCA CCGTTCCG TTTTTCTGAACACGC Nham_3855 4235233 - 4234697 - | hypothetical protein TERM 3862 4235256 - 4235296 + r 74 -8.2 -4.21462 | TTGTGCGCCGTCTTT GTCCGCGTGTCACCCTTG AACAC CAAGCGGCATACGCGGGC TTTTCGATCGTAAAT Nham_3856 4236725 - 4235340 - | hypothetical protein Nham_3857 4237057 - 4236725 - | hypothetical protein TERM 3863 4237235 - 4237225 - R 78 -8.2 -4.42062 | overlap 4237226 GATGTTGTAAAGAAA CGGC CCG GCCG GATTCCGGCTTAGGG Nham_3858 4238372 - 4237338 - | hypothetical protein TERM 3864 4239074 - 4239036 - H 100 -19.6 -3.92602 | GCAACAGCGCAGAAA GCGCCCTCACTACGAGCG GAG CGCAGGTAGTGAGGACGC GTGCCGCAGGGGCAC TERM 3865 4239143 - 4239161 + H 71 -11.7 -2.87344 | TGCGCATTATGCACA CCGTGCC GGATA GGCACGG TCTCTGCACGGAATG TERM 3866 4239493 - 4239469 - H 71 -11.4 -3.22114 | opp_overlap 4239472 4239477, overlap 4239472 CAGACCAGAGCAAGA CAATGCGGCG TCGCT CGCCGCGTTG AATGGACCACTCCGC TERM 3867 4239622 - 4239606 - gH 86 -8.7 -4.63928 | opp_overlap 4239609 4239611 ATATGACCTGAAAAA CATCGCC CTG AGCGATG GCGTAGGGTCGTTTC Nham_3859 4239577 - 4240494 + | putative integrase Nham_3860 4240463 - 4240798 + | hypothetical protein Nham_3861 4240978 - 4241622 + | cobyrinic acid a,c-diamide synthase Nham_3862 4241619 - 4241885 + | hypothetical protein TERM 3868 4242207 - 4242186 - g 74 -5.7 -4.42386 | opp_overlap 4242190 4242191, overlap 4242187 4242188 CGCCGATTGAGAAAA TCCTGCGCG CGGT CGCGCCCGA TGACGCGCAGCGCGA TERM 3869 4242190 - 4242222 + G 91 -6.8 -5.26875 | gap 1, opp_overlap 4242186 4242188 4242187, overlap 4242191 GATTGAGAAAATCCT GCGCGCGGTCGCGCC CGAT GACGCG-CAGCGCGA TTTTTTCATTCCGGA TERM 3870 4242191 - 4242221 + G 74 -10.3 -3.75402 | gap 1, opp_overlap 4242186 4242188 4242187, overlap 4242190 ATTGAGAAAATCCTG CGCGCGGTCGCGCC CGAT GACGCG-CAGCGCG ATTTTTTCATTCCGG TERM 3871 4242767 - 4242732 - g 72 -12.4 -3.33151 | opp_overlap 4242730 4242727, overlap 4242726 TGGCGGAAACCAACA CCGGCGCAGCCACGCG AATC CGCGTTGCGGTGCCAG ACTGGATTTACGCGG Nham_3863 4241915 - 4243096 + | hypothetical protein Nham_3864 4244072 - 4245685 + | recombinase Nham_3867 4249718 - 4248504 - | esterase, PHB depolymerase Nham_3868 4250150 - 4249722 - | CopG family transcriptional regulator TERM 3872 4250351 - 4250361 + r 81 -3.2 -5.27477 | GGCGATCAGGTCATA TTCG GAA CGGA TTTTTTCCTTGCCAT TERM 3873 4250916 - 4250878 - R 93 -17.4 -3.18264 | CGCCCGATGCAGCAA CTGCGAACCGGGCCGCGA TGA TCGCGGCAGCGTTCGCAG CGCCACGCTGAGCGC Nham_3870 4251402 - 4251163 - | hypothetical protein TERM 3874 4251353 - 4251367 + g 84 -4.2 -5.18726 | GTGTTGCCGTGCTTC CGGC TGATCGC GCCG TTTTTCTTGTCACGG Nham_3871 4252361 - 4251423 - | hypothetical protein TERM 3875 4253228 - 4253212 - H 76 -3 -4.98255 | gap 1 TTGGAATGAGAAAAA TGCCGAC GCAT GT-GGCA GCGATCATGCCAAAG TERM 3876 4254208 - 4254196 - g 74 -2.6 -4.89477 | TGGCCAAGAAGAAAA CAGC TGTTC GCCG TGAATGGCCTCTCTC Nham_3874 4254180 - 4254356 + | hypothetical protein Nham_3875 4254476 - 4254754 + | hypothetical protein TERM 3877 4255340 - 4255371 + G 76 -10.8 -3.6869 | CGGCCGGGACCGCGG TTGCGGTGCCAGCC TTGC GGCTGGCACGGGGA TTTCCGCTTCCTCTC Nham_3876 4255093 - 4256094 + | hypothetical protein TERM 3878 4256516 - 4256527 + G 74 -5.8 -4.39426 | overlap 4256500 4256513 4256514 CGACTTCGCGAAGCG GCAG CCGG CTGC TTTTCTGGGACTGTC Nham_3877 4256091 - 4256627 + | hypothetical protein Nham_3878 4256624 - 4257019 + | hypothetical protein Nham_3879 4257016 - 4257723 + | hypothetical protein Nham_3880 4257817 - 4258278 + | hypothetical protein Nham_3881 4258305 - 4258565 + | transglycosylase-associated protein TERM 3879 4259229 - 4259212 - g 76 -7 -4.42653 | ACGGTACTGACAAAA TTGGCG GATCTG CGCCAA AACCTCAAAGCGCCG TERM 3880 4260969 - 4260981 + G 70 -10.5 -3.57144 | CGTTTCGGACATCGA GCGCG ACC CGCGC TTTGCCGATAACCAG Nham_3882 4258846 - 4261194 + | putative GAF sensor protein TERM 3881 4262784 - 4262812 + T 74 -10.9 -3.60035 | overlap 4262788 4262799 CAGAAAAGCCGCCAG CTGTCCTCGGTTC GCT GAACCGCGGTCGG TTAATTGTCTTTCTC TERM 3882 4263220 - 4263182 - T 75 -12.4 -3.17797 | overlap 4263199 CGGATACAGACCGAA CAGGGTCGCCATGACAAG GGC CCCGCCATCGCGATCCTG CAGATCGGCGGCATG Nham_3886 4264721 - 4263399 - | RNA-directed DNA polymerase (Reverse transcriptase) TERM 3883 4265074 - 4265090 + r 100 -15.1 -3.86194 | CCCGTTGGATCGCTC GGCCGCC CAA GGCGGCC TTTGTCACGAGGCTT Nham_3887 4265629 - 4265150 - | transposase and inactivated derivatives-like Nham_3889 4266988 - 4267629 + | ISMca7, transposase Nham_3890 4268834 - 4267977 - | hypothetical protein TERM 3884 4268226 - 4268198 - G 83 -7.3 -4.59773 | opp_overlap 4268192 4268198 4268201, overlap 4268199 4268200 GGCCACTGGCAAAAA TCGCGCGCAGCGT CGC ACGTTGCGCGTCA TCTATGTTGATCGGC TERM 3885 4268198 - 4268226 + g 70 -11.7 -3.12449 | opp_overlap 4268198 4268199 4268200, overlap 4268192 4268201 GGCCACTGGCAAAAA TCGCGCGCAGCGT CGC ACGTTGCGCGTCA TCTATGTTGATCGGC TERM 3886 4268201 - 4268223 + g 78 -15.6 -2.76689 | opp_overlap 4268200 4268198 4268199, overlap 4268198 4268192 CACTGGCAAAAATCG CGCGCAGCGT CGC ACGTTGCGCG TCATCTATGTTGATC TERM 3887 4268370 - 4268385 + g 77 -2.5 -5.06816 | ATTTTGCTTCACCAC TTCCG GGGCAA CGGGA TTTTTCTTCGCGGCT TERM 3888 4270967 - 4270988 + H 75 -3.7 -4.82901 | gap 1, opp_overlap 4270981, overlap 4270970 CTAGCCGGCAGTGTT TCG-GCGGTA AGT TACCGCTCCA TTTTTCTGGACGCGG Nham_3893 4271406 - 4271648 + | hypothetical protein Nham_3894 4272150 - 4271617 - | cytochrome B561 Nham_3895 4273491 - 4272397 - | putative transposase Nham_3896 4274167 - 4273784 - | hypothetical protein Nham_3897 4274257 - 4274790 + | hypothetical protein Nham_3898 4274875 - 4275315 + | hypothetical protein TERM 3889 4275829 - 4275807 - f 89 -6.2 -5.03715 | ATCACGCTTAAAAAA GACAACGCAC GCC GCACGCTGCC AAAATACCAAGTCGT Nham_3899 4276093 - 4276437 + | hypothetical protein TERM 3890 4277696 - 4277685 - f 70 -2.2 -4.72272 | CTCGGGGATTAAAAA CAGT GCAC ACCG GTACCAAAAACGGTG TERM 3891 4277873 - 4277839 - f 74 -6.4 -4.4261 | overlap 4277833 TCGTCAAGATGAAAA TGACGCCATTTTGCAA ACA CTGCATGATGCCGTCA AAGCAACCCGCGAAT TERM 3892 4278173 - 4278215 + G 78 -10.5 -4.07568 | overlap 4278166 ATCCGGGGGCGCTCA CCG-CGCTGCTTCGCGAGCGG GCG CCGCATGCGGAGC-GCATCGG TTTTGAGACGGGGGC TERM 3893 4278448 - 4278425 - g 74 -5.9 -4.46757 | opp_overlap 4278439, overlap 4278426 4278427 AAGATAGCCAGAAAA TCCGCGCGA TACTCG TCGCGCGAT CCCGGCTTGTGGCCA Nham_3900 4278058 - 4278738 + | transposase, IS111A/IS1328/IS1533 TERM 3894 4280008 - 4279982 - g 100 -14.4 -4.33151 | overlap 4279983 4279992 4279996 GATGACAATCGAAAA TGGCCGCAAACG AAT CGTTCGCGGCCG CCGCAAAGATCGCTC TERM 3895 4280007 - 4279983 - g 91 -17.9 -3.19168 | overlap 4279982 4279992 4279996 ATGACAATCGAAAAT GGCCGCAAACG AAT CGTTCGCGGCC GCCGCAAAGATCGCT TERM 3896 4281082 - 4281054 - g 78 -15.3 -2.71011 | ACGTTGCCTGAAGCA GCCAGGATGCTCA ATC TGAGCCCCCTGGC GGTGCTACGCCAGAT Nham_3901 4279188 - 4281257 + | recombinase TERM 3897 4281570 - 4281560 - T 71 -6.8 -4.16284 | ATAGGCGTGAAGAAA GCGA AGG TCGC CATTGCACGGAAGAT Nham_3903 4282171 - 4281875 - | hypothetical protein ligC 4283805 - 4282780 - | ATP-dependent DNA ligase TERM 3898 4283850 - 4283877 + r 95 -13.4 -4.17002 | gap 1 CGCGGCTTTTCGCTT GCGGCCA-CGGCG ACG CGCCGATGTCCGC TTCTTTCCTTTAATC Nham_3906 4284641 - 4283832 - | hypothetical protein TERM 3899 4283896 - 4283906 + g 77 -2.4 -5.00616 | TTTCCTTTAATCGGA GGCG TCG CGGC TTTTTTGCGGCCCAA ligD 4284719 - 4287421 + | ATP-dependent DNA ligase Nham_3908 4287667 - 4287452 - | hypothetical protein TERM 3900 4287847 - 4287877 + H 83 -4.5 -5.08601 | overlap 4287839 CGTATGGCCTGCGCG CCGGCGGGTTCTG TTTAT CAGCGCCAGCGGG TTTTTATTGGGCTAA Nham_3910 4288786 - 4289220 + | hypothetical protein Nham_3911 4289520 - 4289263 - | hypothetical protein Nham_3912 4290699 - 4289539 - | ribonuclease BN, putative Nham_3913 4292342 - 4291479 - | IstB-like ATP-binding protein Nham_3914 4293841 - 4292342 - | integrase catalytic subunit TERM 3901 4293871 - 4293851 - R 70 -11.9 -2.72661 | CAGCATCCCCAACCA CCTGCTTCG TTC CAAAGCAGG CAGCGCAACAGACCA Nham_3915 4294803 - 4294087 - | HAD family hydrolase TERM 3902 4294928 - 4294977 + r 71 -11.6 -3.30243 | CACTTTGCCTGGCCC GGATTTCTGTTTCATCTTCGCT CCTTGC GGCTACGATGAACCAGAAATCC TTGTAACGCCTCAAT Nham_3916 4296696 - 4295164 - | FAD dependent oxidoreductase TERM 3903 4296858 - 4296845 - H 70 -3.8 -4.68511 | opp_overlap 4296845 GGGAACACAAACAAA TCGC GCCCCT GCGA TATCTATGACCTGAC TERM 3904 4296906 - 4296896 - H 71 -8.2 -4.09685 | opp_overlap 4296895 GCCCAGCCTGCAAAA GCGC TCA GCGC GTAATGTCCTTTAGA TERM 3905 4297942 - 4297929 - g 72 -4.5 -4.56775 | overlap 4297915 ACTGCTGGCCAAAAA GCAGA AGGG CCTGC CGATCACGGCAACTA Nham_3917 4297249 - 4298085 + | hypothetical protein TERM 3906 4298111 - 4298095 - f 70 -2.1 -4.78848 | overlap 4298096 GGGTGAAATAGAAAA CCCTGAG CGG CACAGGC AGGATCAGTCGTCAC TERM 3907 4298478 - 4298468 - f 70 -2.4 -4.72272 | TCGCGTGACGAAAAA GCGC ACC GCTC CGAAAAATAAAACCC TERM 3908 4298506 - 4298491 - f 86 -4.6 -5.26119 | overlap 4298493 CTCCGAAAAATAAAA CCCCCA CCAG TGGCGG ATGGCCACGGGCGCC Nham_3918 4298500 - 4298757 + | hypothetical protein TERM 3909 4299255 - 4299245 - f 76 -3.2 -5.00616 | GGCCGGCGGAAAAAA CTGC AAG GCAA CGGTCAGCAATTGAC Nham_3919 4299545 - 4299661 + | small heat shock protein Nham_3920 4300154 - 4300396 + | hypothetical protein TERM 3910 4300698 - 4300717 + T 100 -12.8 -5.21709 | opp_overlap 4300696, overlap 4300699 CCCGACTAAATGATT TGCCCCGC TTCC GCGGGGCG TTTTTTAATCTGCAC TERM 3911 4300699 - 4300716 + T 95 -14.1 -3.72302 | opp_overlap 4300696, overlap 4300698 CCGACTAAATGATTT GCCCCGC TTCC GCGGGGC GTTTTTTAATCTGCA Nham_3922 4300961 - 4300722 - | hypothetical protein Nham_3923 4301955 - 4303454 + | integrase catalytic subunit Nham_3924 4303454 - 4304317 + | IstB-like ATP-binding protein TERM 3912 4305943 - 4305931 - g 75 -3.3 -4.89477 | overlap 4305933 4305934 TGCTCAAGAAGAAAA CAGCA GTT CGCCG CGAATGGACGAAGGA Nham_3926 4305915 - 4306094 + | hypothetical protein TERM 3913 4308403 - 4308352 - f 74 -2.1 -4.96028 | gap 1, opp_overlap 4308374, overlap 4308353 4308356 CCGGAAAAAAAAGAA TCAACGGCCCACCGCCACAGCCGA GTTTG CCGGCCGT-GCGCCACGCCATCGT CGAACTCATTCTTCG TERM 3914 4308517 - 4308484 - f 100 -21.3 -4.15788 | opp_overlap 4308484 AACGGCGTGAATAAA TCTGCCAAAGTAGTG CTAG CACTACTTTGGCAGA TTTTTGCGATGGATC TERM 3915 4308484 - 4308517 + F 100 -21.3 -4.62783 | opp_overlap 4308484 AACGGCGTGAATAAA TCTGCCAAAGTAGTG CTAG CACTACTTTGGCAGA TTTTTGCGATGGATC Nham_3929 4308600 - 4309934 + | putative transposase Nham_3930 4310150 - 4310350 + | hypothetical protein TERM 3916 4310504 - 4310489 - T 74 -2.5 -5.01497 | overlap 4310463 4310462 ATGATCATACAAAAA TGACG CATTCT CGCCA ACGTTGCCGCGCCCC TERM 3917 4310920 - 4310891 - T 100 -22.9 -4.72007 | gap 1 TCCGATCAAAATAAA GCCCGCCGG-GGCC GGG GGCCACCGGCGGGC CCGGGGGTGAACGGG Nham_3931 4311473 - 4311030 - | PRC-barrel TERM 3918 4311534 - 4311555 + r 73 -12.9 -2.85712 | overlap 4311531 GCCCTTCGTTCCTTT GCGGCGGGC GCGT GCCCGGCGC TGCTTGTCCCTCTCA TERM 3919 4311869 - 4311838 - R 100 -13 -4.62336 | AGGTGATCGCAAAAA CCCGCCGGCG TTGATCTGGGGG CGCCGGCGGG TCCGGCCGGAGACCG TERM 3920 4312015 - 4311991 - R 100 -15 -4.8048 | GCGCCACACCAAAAA GGCCCGCCAA GGAGA CTGGCGGGCC TGATCGGGTCGGGAA TERM 3921 4312180 - 4312161 - R 93 -12.1 -4.30576 | GTGGCAGCACGAAAA GCCCGCC GAACAT GGCGGGC TGAACGCAAATATGA Nham_3932 4312578 - 4312312 - | hypothetical protein Nham_3933 4313386 - 4313069 - | hypothetical protein TERM 3922 4313936 - 4313953 + G 71 -11.3 -3.53012 | ACTCACCGGCGTGAG CCTTGCG TCCG CGCAAGG TTTGAGCGGCGGCGG Nham_3935 4313874 - 4315442 + | peptidoglycan binding domain-containing protein TERM 3923 4315455 - 4315486 + F 93 -13.6 -3.92324 | opp_overlap 4315452 4315451, overlap 4315456 TAGATTCAAAACGCC TTGGGGAGCCCCGC ATTG GCGGGGCTCCCAGC TTTAGTGTTGCCACC TERM 3924 4315456 - 4315485 + F 88 -17.1 -2.95073 | opp_overlap 4315452 4315451, overlap 4315455 AGATTCAAAACGCCT TGGGGAGCCCCGC ATTG GCGGGGCTCCCAG CTTTAGTGTTGCCAC TERM 3925 4316113 - 4316123 + F 77 -2.4 -5.07107 | overlap 4316109 4316121 TTAGGTACGTCGCGA AGGC TCC GCCG TTTTTTCACGGTTTC TERM 3926 4316121 - 4316134 + F 70 -3.8 -4.64861 | overlap 4316113 4316132 4316133 GTCGCGAAGGCTCCG CCGT TTTTTC ACGG TTTCTTTTCAAGGAG Nham_3939 4316533 - 4317558 + | transposase IS116/IS110/IS902 TERM 3927 4317742 - 4317727 - T 77 -11.8 -3.59979 | CCGCGGCATGCGAAA GGCCGC AGCA GCGGCC GGGATCCGCCAGTGA Nham_3940 4318086 - 4317877 - | hypothetical protein Nham_3941 4318212 - 4318532 + | hypothetical protein Nham_3942 4319338 - 4319700 + | hypothetical protein Nham_3943 4320914 - 4319898 - | transposase IS116/IS110/IS902 TERM 3928 4320339 - 4320305 - G 73 -8.8 -4.07568 | gap 2 CGCTGCCGCGGAAAA CCGCATC--GATCTTC TTGTC GAAGATCGCGATGCGG CGGTCGAGATCTCGG TERM 3929 4321605 - 4321630 + G 74 -5.5 -4.42062 | gap 1, overlap 4321608 ATCAGCGTCAGTCAC CG-ATCCAGC GGCCTAA GCTGGATGCG TTTGTTTCGACGATC Nham_3945 4321463 - 4321900 + | transposase Nham_3946 4321897 - 4322286 + | hypothetical protein TERM 3930 4322304 - 4322291 - f 87 -9.5 -4.65446 | overlap 4322293 ACGACATATAGAAAA CCCGC CGGG GCGGG GCACTGAGGTTTTTT TERM 3931 4322691 - 4322638 - f 100 -18.4 -5.11033 | overlap 4322639 4322640 GACAATCTGAAAAAA GC-CGATCGGAGTGAGGTCACGATCG GCGC CGATCGTGACCCCACTCTGA-CGTAC ATCGCGGCCATTCGA TERM 3932 4322689 - 4322639 - f 100 -19.9 -3.65535 | gap 1, overlap 4322638 4322640 ACAATCTGAAAAAAG CCGATCGGAGTGAGGTCACGATCG GCGC CGATCGTGACCCCACTCTGA-CGT ACATCGCGGCCATTC TERM 3933 4322688 - 4322640 - f 100 -23.4 -2.78237 | gap 1, overlap 4322639 4322638 CAATCTGAAAAAAGC CGATCGGAGTGAGGTCACGATCG GCGC CGATCGTGACCCCACTCTGA-CG TACATCGCGGCCATT TERM 3934 4323153 - 4323120 - f 100 -21.1 -3.60792 | gap 1, opp_overlap 4323117 4323114 GCGTCAACGCGCAAA CCGCCA-CGCCCAACG CCA CGTCGGGCGCTGGCGG CGGTGTCTCATCGAG TERM 3935 4323210 - 4323222 + F 74 -6.2 -4.41616 | opp_overlap 4323210 CAACGGCCGGCAACA CCGG CGCAA CCGG TTTCTTTGGCGGCAT Nham_3948 4323335 - 4323664 + | hypothetical protein TERM 3936 4324086 - 4324067 - T 75 -8.6 -4.07568 | gap 1 GCCCCCGTCTCAAAA CCG-ATGCG CTC CGCATGCGG CGGCCGCATTCACGG Nham_3949 4325000 - 4324521 - | hypothetical protein TERM 3937 4324861 - 4324871 + g 72 -2.4 -4.68593 | TAGTTCTCCTCGTGT ACCG TCT CGGG TTTTTCGGTCCTGAC TERM 3938 4325209 - 4325188 - R 70 -3.7 -4.56775 | gap 1, overlap 4325202 AGTCGGCTTTAAAAA CGTGGCGG TAATCAG CCG-CACG CCAAGACCGCCTGCG Nham_3950 4325818 - 4325285 - | hypothetical protein Nham_3951 4325908 - 4326249 + | hypothetical protein TERM 3939 4326348 - 4326326 - f 100 -16.3 -5.08367 | opp_overlap 4326345, overlap 4326343 AACACAAAGGAAAAA CCGCGGTCG GACAA CGACCGCGG CTGCCGCTGCTAATT Nham_3952 4326483 - 4326824 + | hypothetical protein Nham_3955 4328849 - 4329877 + | transposase IS116/IS110/IS902 Nham_3956 4330255 - 4330770 + | nuclease (SNase-like) Nham_3957 4330851 - 4331111 + | hypothetical protein TERM 3940 4331318 - 4331288 - f 71 -7.5 -4.21194 | opp_overlap 4331287 GCTCATGATTGAAAA CGCATCAGGGCGA TGATC CCTCCGTGATGCG CATTTACGAAGCCGC Nham_3958 4331560 - 4331712 + | hypothetical protein TERM 3941 4331753 - 4331734 - T 74 -11.4 -3.53012 | opp_overlap 4331734 GGTCGCCGTTCCAAA GGCCGACA GAAA TGCCGGCC TTTATCTTGCCGCGC TERM 3942 4331734 - 4331753 + T 80 -9.2 -4.1891 | opp_overlap 4331734 GGTCGCCGTTCCAAA GGCCGACA GAAA TGCCGGCC TTTATCTTGCCGCGC Nham_3959 4332280 - 4331996 - | transposase IS3/IS911 TERM 3943 4332168 - 4332183 + g 72 -4 -4.66537 | gap 1 TCACCACGCAGTCCT TCCAGCA CGA TGC-GGA TTTTCTCTTCGGCCG TERM 3944 4332663 - 4332675 + G 76 -5.5 -4.5442 | CATCGCAGGCCGCAG GTCGG GCA TCGAC TTTTATCCTTGCCGC TERM 3945 4333022 - 4333004 - g 73 -3 -4.6971 | GAAACCGGAAGAAAA GCGCGG AAGGCGG CCGTGC AGGCGGCCAACTAAG Nham_3960 4332557 - 4333036 + | hypothetical protein TERM 3946 4333077 - 4333037 - f 87 -14.1 -3.34013 | overlap 4333039 4333060 CAGGCGGCCAACTAA GATGACGGCGCGCG-GTTC GCAAA GCACGCGCGCGCCGTCA-C AAGCTCGTAATAACA TERM 3947 4333076 - 4333039 - g 91 -17.8 -3.23853 | gap 1, overlap 4333037 4333060 GGCGGCCAACTAAGA TGACGGCGCGCG-GTTC GCAAA GCACGCGCGCGCCGTCA CAAGCTCGTAATAAC TERM 3948 4333166 - 4333189 + G 84 -8.8 -4.52589 | overlap 4333167 CATTTTTCATGCGAT CGGGTGGTTC TTCG GGACCACCCA TTTTCTCTCCGCCCA TERM 3949 4333167 - 4333188 + G 72 -12.3 -3.31232 | overlap 4333166 ATTTTTCATGCGATC GGGTGGTTC TTCG GGACCACCC ATTTTCTCTCCGCCC Nham_3961 4333038 - 4333610 + | membrane protein-like Nham_3962 4334620 - 4333796 - | hypothetical protein TERM 3950 4334728 - 4334671 - R 80 -14.8 -2.72799 | opp_overlap 4334680 TTTGTAGAGACATTA GGGGACGTACTTTGCCCGGCGCCGCA CTGCAT TGCAGCCGTGGGCAAAGTTGGTCCCC TAATCGGGGCAAAGA TERM 3951 4334830 - 4334786 - R 100 -13.6 -4.65895 | gap 1, overlap 4334789 4334791 4334793 GCGCTGAGTGAAAAA TAAGAGAGGTTGGGGGCGAGC TTCA GCTCGCCCCCAACCTGGCG-A CACCGTGTTCGGCAA TERM 3952 4334828 - 4334789 - R 100 -22.2 -4.44608 | overlap 4334786 4334791 4334793 CTGAGTGAAAAATAA GAGAGGTTGGGGGCGAGC TTCA GCTCGCCCCCAACCTGGC GACACCGTGTTCGGC TERM 3953 4334826 - 4334791 - R 100 -23.4 -3.82353 | overlap 4334789 4334786 4334793 GAGTGAAAAATAAGA GAGGTTGGGGGCGAGC TTCA GCTCGCCCCCAACCTG GCGACACCGTGTTCG TERM 3954 4334824 - 4334793 - R 100 -26 -3.47868 | overlap 4334791 4334789 4334786 GTGAAAAATAAGAGA GGTTGGGGGCGAGC TTCA GCTCGCCCCCAACC TGGCGACACCGTGTT TERM 3955 4335182 - 4335204 + r 100 -15 -3.90112 | ACGGGGAGGTTCCAA TTTGGCAGCA CGC TGCTGCCAAA TTTCCTTGGGGCCCC TERM 3956 4335804 - 4335821 + r 70 -2.6 -4.75372 | overlap 4335798 4335803 4335805 TCCAGCGTCCCGTCG CGGCGA CAGTCT TCGCCA TTTTTGGTCCCTGAT Nham_3964 4337674 - 4336421 - | peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins TERM 3957 4337922 - 4337867 - g 70 -11.6 -3.12999 | gap 1, overlap 4337899 CGACGCCACAGCGAA GCAGGCGCGCCGCGCGCAAC-CCGCCG AGA CGACGGCGCCACGCGAGGCAGGCGAGC CGATCATGGCAATCG TERM 3958 4338717 - 4338689 - g 100 -11 -5.36441 | gap 1 GGCTCAGACAAAAAA CGCCGA-CACCGC CAAG GCGGCGCTCGACG CAAAGCTCGCGCTCG TERM 3959 4339197 - 4339217 + G 74 -5.4 -4.56597 | opp_overlap 4339197 GACGGCAACCAACAG GAAGACGA CAGCT TCGGCTTC TTTTTCCCGCGCAAC Nham_3965 4337745 - 4339307 + | hypothetical protein TERM 3960 4340095 - 4340147 + G 72 -7.6 -4.20368 | gap 2, overlap 4340099 4340133 GTGATGGCCGGATGG CGTTGAGTGCGGTCCGCGGCCATCGC CGC GCGGTG-CTG-GAGCCGCACGCTGCG TTTCTGTTGGACTGA Nham_3967 4339905 - 4340162 + | putative transposase of insertion sequence ISRm2011-2, orfA protein Nham_3968 4340514 - 4341788 + | peptidase M20D, amidohydrolase TERM 3961 4342100 - 4342121 + G 71 -8.6 -3.87925 | GATCGGCGCGGTGCC GCCGGCCG CCCTGA CGGACGGC TTCTATTTGCTAGTT Nham_3969 4341921 - 4342589 + | hypothetical protein Nham_3970 4342628 - 4343155 + | hypothetical protein Nham_3971 4343701 - 4343234 - | hypothetical protein TERM 3962 4343558 - 4343545 - G 100 -3.7 -5.78622 | TGACGGCAAAAAAAA CGTCC ATTT GGGCG TCTCGACGATTGGAA Nham_3972 4344153 - 4343722 - | hypothetical protein TERM 3963 4343911 - 4343930 + g 76 -10.6 -3.84825 | GCTTCGGCGTTGCTG GCGGCCAG ACAC CAGGCCGC TTTCATGTCCCTGGC Nham_3973 4345446 - 4344217 - | amidohydrolase Nham_3975 4347044 - 4346307 - | hypothetical protein Nham_3976 4347454 - 4348026 + | NADPH-dependent FMN reductase Nham_3977 4348142 - 4348993 + | extradiol ring-cleavage dioxygenase III subunit B Nham_3979 4351769 - 4352218 + | hypothetical protein TERM 3964 4352677 - 4352687 + F 87 -8.2 -4.86621 | opp_overlap 4352653, overlap 4352672 TGGGAACATTCGGCG CGCG TGC CGCG TTTTTCCTTCCCAAT Nham_3980 4352716 - 4353093 + | PRC-barrel Nham_3981 4353323 - 4354228 + | ribonuclease BN, putative Nham_3982 4354369 - 4355031 + | hypothetical protein Nham_3983 4356524 - 4355139 - | transposase IS66 TERM 3965 4355952 - 4355937 - G 70 -7.5 -4.07568 | opp_overlap 4355926 GGCCTGCCGGTAAAA CGGCG TATGAT CGCCG AACTTGGCGACGATC TERM 3966 4357593 - 4357568 - g 71 -11.1 -3.53012 | GCGCTTCTCGTCAAA GGCGGCACCGA TACC TCGATGCCGAC CAGACCGTCTGACGC Nham_3985 4357487 - 4357639 + | hypothetical protein Nham_3986 4357920 - 4357783 - | hypothetical protein TERM 3967 4357951 - 4357961 + r 79 -6.8 -4.66537 | overlap 4357948 4357947 CGGCGCCGACACCCG CTCC GGC GGAG TTTTCTATTGCAGGA TERM 3968 4358327 - 4358290 - R 70 -12 -2.78715 | gap 1, opp_overlap 4358294 AATGGTGCCACCATA CTGACGCGGCGTGCG GCAGCGCCT CGCTCGCCGCG-CAG CGGAGTATGTTCGGG TERM 3969 4358767 - 4358757 - R 74 -6.8 -4.40561 | GCTCTTCAAAAACAA CGGT CGA ACCG CACAAGAAGTAGCGT Nham_3987 4359137 - 4358955 - | hypothetical protein TERM 3970 4359503 - 4359484 - R 100 -15 -5.21709 | opp_overlap 4359482 GTGCAGATTAAAAAA TGCCCCGC CGAA GCGGGGCA AATCATTTAGTCGGG Nham_3988 4359719 - 4359510 - | CsbD-like Nham_3989 4360233 - 4359910 - | hypothetical protein Nham_3990 4361562 - 4360264 - | MCP methyltransferase, CheR-type TERM 3971 4360453 - 4360432 - G 76 -13 -3.53091 | ACGTTGCGGCGGAAA TCCGGCCG TGGCGG CGGCCGGA TAAATGCCGTCGCGC TERM 3972 4362052 - 4362068 + G 84 -2.1 -5.36441 | opp_overlap 4362052 4362053, overlap 4362053 TGACGCCATCGAGAA GCGTGAC GCC GCCACGG TTTTTTATCTAACGG Nham_3991 4361759 - 4363687 + | ABC transporter related Nham_3992 4363684 - 4363917 + | hypothetical protein Nham_3993 4364844 - 4364236 - | hypothetical protein TERM 3973 4364921 - 4364938 + H 74 -11.3 -3.53761 | overlap 4364899 CAACTTCTTTTCGGA TCGGCTC TTAA GAGCCGA TTTAGGAAGAACTTG Nham_3994 4365012 - 4365515 + | transposase and inactivated derivatives-like Nham_3995 4365522 - 4366775 + | transposase IS116/IS110/IS902 Nham_3996 4368336 - 4367305 - | transposase IS116/IS110/IS902 TERM 3974 4368601 - 4368584 - R 70 -2.6 -4.75372 | overlap 4368585 4368586 4368593 ATCAGGGACCAAAAA TGGCGA AGACTG TCGCCG CGACGGGATGCTGGA Nham_3998 4369946 - 4368855 - | putative DNA topoisomerase I TERM 3975 4369069 - 4369091 + g 72 -4 -4.65895 | overlap 4369064 4369071 CGGCAAATGGTCGGT GCGTTGCCGA GTT TCGCCGACAC TTTTTCAATGGCGGC TERM 3976 4369845 - 4369857 + g 100 -4.7 -5.40004 | opp_overlap 4369845 GCGTAAGTAGGTAAA GCCGG TGC CCGCC TTTTTTCGTTTAATG Nham_3999 4370498 - 4371079 + | hypothetical protein Nham_4001 4371397 - 4372032 + | phosphoesterase, PA-phosphatase related Nham_4002 4372156 - 4372503 + | hypothetical protein TERM 3977 4372779 - 4372749 - gT 75 -11.8 -3.25823 | gap 1 CGGCGCGGACAGGAA GCGGCGGCGCTGG ACGCGG CCGGCGCCGC-GC TTGGCGCGCTTGGGA Nham_4004 4373298 - 4372828 - | DNA-directed DNA polymerase Nham_4003 4372500 - 4372934 + | hypothetical protein TERM 3978 4373908 - 4373892 - TR 100 -15.1 -4.88711 | opp_overlap 4373889 4373892 ACAACACATGAAAAA GCCCGCC AGA GGCGGGC TAATTCACTGATATC TERM 3979 4373892 - 4373908 + Tr 83 -15.1 -2.7674 | opp_overlap 4373892, overlap 4373889 ACAACACATGAAAAA GCCCGCC AGA GGCGGGC TAATTCACTGATATC Nham_4006 4374859 - 4374110 - | hypothetical protein TERM 3980 4374393 - 4374379 - G 75 -4.2 -4.76041 | TATAGGGACCAAAAA TCACGA CAG CCGCGA GCGCATTCGGGTCAT Nham_4007 4375157 - 4375990 + | hypothetical protein Nham_4008 4376193 - 4377389 + | phage-related integrase Nham_4009 4377671 - 4378657 + | hypothetical protein TERM 3981 4378746 - 4378733 - g 72 -3.7 -4.56597 | overlap 4378735 TCGCTCCGCCAAAAA CCGCG CTGC CGCCG CTGTCGCCCGATCTG Nham_4010 4378711 - 4380147 + | FAD linked oxidase-like Nham_4011 4381114 - 4380350 - | hypothetical protein Nham_4012 4381178 - 4381690 + | hypothetical protein Nham_4013 4382233 - 4381703 - | ISSpo6, transposase OrfB TERM 3982 4381897 - 4381921 + g 76 -5.5 -4.63542 | opp_overlap 4381894 4381892 4381897, overlap 4381913 4381919 GCGGCAGGAACAGGA GCCACGCGCCC CGT GCGCGGATGGC TTTTTCGGCCTTCTC Nham_4014 4382657 - 4382280 - | ISSpo6, transposase orf A TERM 3983 4382739 - 4382775 + H 100 -19.7 -2.78738 | overlap 4382732 4382744 TGATCGCCCGACGCT CTAGAGTCTGATCCAAC TGC GTTGAATCAGACTCTAG TCCTTACCCTTTTGA TERM 3984 4382744 - 4382770 + H 70 -12.4 -2.86343 | overlap 4382739 4382732 GCCCGACGCTCTAGA GTCTGATCCAAC TGC GTTGAATCAGAC TCTAGTCCTTACCCT Nham_4015 4382844 - 4383275 + | NUDIX hydrolase Nham_4016 4383359 - 4383736 + | hypothetical protein TERM 3985 4383761 - 4383774 + F 70 -2.3 -4.74598 | overlap 4383758 4383762 TGCCGCACATTCCAG ACTCG GAGC CGAGG TTTGTTTTCGATTTC Nham_4017 4383928 - 4384194 + | hypothetical protein Nham_4018 4385606 - 4384212 - | dihydroorotase TERM 3986 4384588 - 4384605 + g 74 -4.8 -4.63932 | ATGCCTGATGGCGAG GCGGGA TAGGTC TTCCGC TTTTCTTCCAGCGTG TERM 3987 4384893 - 4384918 + g 81 -12.5 -3.72893 | opp_overlap 4384911 GGCGAGATTGACCAG CCGCTGCGTCG CCAG CAACGCGGCGG TTTCGTCGCGCCATA TERM 3988 4384996 - 4385038 + g 78 -6.8 -4.57837 | opp_overlap 4385010 TTGAGGCGGTATTCG TCCTCGGCGTGAAACGACGC GCG GCGGCGGATCACCCTGAAGA TTTTTCGCAGGCTGT TERM 3989 4386031 - 4386005 - g 70 -12.2 -3.21924 | overlap 4386003 4386006 TCACGGTCGACAACA TCTCCAGCACGC TTG GCGTGCTGGCGG CCTGGGATGGCGAGC TERM 3990 4386030 - 4386006 - g 76 -15.7 -2.5294 | overlap 4386005 4386003 CACGGTCGACAACAT CTCCAGCACGC TTG GCGTGCTGGCG GCCTGGGATGGCGAG TERM 3991 4386404 - 4386461 + G 90 -17.7 -3.07043 | gap 1, opp_overlap 4386423 CGGATGCAGGCACGG CCATCG-TCGCGGCGGACAAGTCCGTGG GCA CCATGGGCTCGTCGGCCGCGAGCCAAGG TCTTGCGCTGCTGCG Nham_4019 4385713 - 4386594 + | glycine cleavage T protein (aminomethyl transferase) TERM 3992 4386756 - 4386768 + G 70 -7.7 -4.07568 | opp_overlap 4386725 4386726 TTTCAGGCTGGCCTG TCGTG GAT CACGA TTTTGCGCAAGCGCG Nham_4020 4386591 - 4387217 + | DNA-3-methyladenine glycosylase I Nham_4021 4387214 - 4387825 + | metal dependent phosphohydrolase Nham_4022 4387968 - 4388474 + | hypothetical protein Nham_4023 4389358 - 4388588 - | peptidase C26 Nham_4024 4389822 - 4390187 + | hypothetical protein Nham_4025 4391627 - 4390452 - | hypothetical protein TERM 3993 4391168 - 4391179 + g 85 -5.8 -5.0133 | CCCAAAATTTATCGG CACC ACTT GGTG TTTTTTCGACGACTC TERM 3994 4392706 - 4392716 + r 83 -8.2 -4.67038 | overlap 4392698 4392689 CCTTGATGCCGAGCG GCGC GAG GCGC TTTTCCTTTTCAAGA TERM 3995 4393198 - 4393153 - R 72 -9 -3.83026 | TCTGGCGACATCAAA TCGACC-GTGGCCGCGCCGGAC GTCA GCCAGGCGCG-CAACTGGTCAA TGACGCGGTCGTTAC Nham_4027 4393635 - 4393330 - | XRE family plasmid maintenance system antidote protein Nham_4028 4393934 - 4393650 - | plasmid maintenance system killer TERM 3996 4394023 - 4394049 + r 100 -15.8 -4.66163 | opp_overlap 4394000, overlap 4394024 GCCCCGGCAGGCCAA CCGGCGTTCGCC GCT GGCGGACGCCGA TTTTTCCGTGCCAAT TERM 3997 4394024 - 4394048 + r 100 -19.3 -3.39216 | opp_overlap 4394000, overlap 4394023 CCCCGGCAGGCCAAC CGGCGTTCGCC GCT GGCGGACGCCG ATTTTTCCGTGCCAA TERM 3998 4394111 - 4394144 + r 100 -19.6 -3.67611 | opp_overlap 4394107 TGTCAGATAGAGCGG CACGGCGCAGGCGG CGGTTC CCGACTGCGCCGTG TTCTATTCGGGTAGC TERM 3999 4394162 - 4394181 + r 76 -12.8 -3.06796 | CTATTCGGGTAGCTG GCCGCTGC TCAC GCGGCGGC TTCCATCGCCTGCGG Nham_4029 4395075 - 4394170 - | peptidase M, neutral zinc metallopeptidases, zinc-binding site TERM 4000 4394987 - 4395009 + g 74 -4.9 -4.66833 | TGGTCCGCGTTCCAC GGC-TTCAGCC ATG GGC-GAACGCC TTTTTCCAGTTCCGC TERM 4001 4395272 - 4395286 + H 100 -12.8 -5.21709 | GGTCTTGACGGCCAT GGGGCC GCA GGCCCC TTTTTTGATATGAGG TERM 4002 4395395 - 4395380 - H 86 -11.8 -4.07568 | opp_overlap 4395379 4395380 CCCTCGTCGCGAAAA GGCGGG GCGG CCCGCC GTTATCGAAGCGCCG TERM 4003 4395698 - 4395715 + H 100 -4.7 -5.78622 | CTTCCTGCGTGCAGG CCGGGTG ATGC CCCTCGG TTTTTTTTCGCATGC Nham_4030 4395727 - 4395996 + | hypothetical protein TERM 4004 4399122 - 4399132 + T 72 -5.4 -4.46587 | GCATGGGGTCACGCT TACC ACT GGTA TTATTTTCTTCCTCG TERM 4005 4399464 - 4399490 + T 95 -13.6 -4.13767 | AGAAGGCCTTTCTGC CGCGCTCCCGCA CTT TGCGCGCGCGCG TTTTCGCCTCGAACG Nham_4032 4400339 - 4399665 - | hypothetical protein Nham_4034 4401851 - 4401564 - | hypothetical protein Nham_4035 4402942 - 4401848 - | response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase Nham_4036 4403252 - 4403611 + | hypothetical protein Nham_4037 4404376 - 4403669 - | polysaccharide export protein Nham_4038 4404794 - 4404480 - | hypothetical protein TERM 4006 4405095 - 4405120 + H 73 -12.5 -2.72371 | opp_overlap 4405087, overlap 4405097 4405098 TATAAGACCGCTGAC TGGCGGCGGGG GCGA TCCTGCCGCCG CTGTTCTTTGAACGG TERM 4007 4405097 - 4405121 + H 74 -11.4 -3.54488 | gap 1, opp_overlap 4405087, overlap 4405095 4405098 TAAGACCGCTGACTG GCGGCGG-GGG CGAT CCTGCCGCCGC TGTTCTTTGAACGGC TERM 4008 4405098 - 4405123 + H 77 -10.3 -3.90744 | opp_overlap 4405087, overlap 4405095 4405097 AAGACCGCTGACTGG CGGCGGGGGCG ATCC TGCCGCCGCTG TTCTTTGAACGGCGC TERM 4009 4405422 - 4405402 - g 89 -16.9 -3.14931 | CGGATCGTCGAGGAA GCGATCGCC AAG GGCGATCGC GACGCCGCGATCCAG rpsT 4405291 - 4405557 + | 30S ribosomal protein S20 TERM 4010 4405597 - 4405617 + F 100 -15.4 -5.55855 | opp_overlap 4405597 GTATTCTTCAGCAGA GGCCCGGC CGATC GCCGGGCC TTTTGTTTTTTTGCG TERM 4011 4405617 - 4405597 - f 83 -15.4 -2.78816 | opp_overlap 4405597 GTATTCTTCAGCAGA GGCCCGGC CGATC GCCGGGCC TTTTGTTTTTTTGCG TERM 4012 4406030 - 4406020 - f 89 -2.4 -5.65177 | ACAGTCAGAAAAAAA TGCG CCT CGCT AATCACTTATCCACA Nham_4040 4406668 - 4406940 + | hypothetical protein