TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.504186 %AT, 2318929 nt, 18436 terms. Intergenic: 0.566742 %AT, H2T: 296318 nt, 2285 terms; T2T: 82580 nt, 1385 terms; H2H: 106985 nt, 1595 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|114326555|ref|NC_008341.1| Nitrosomonas eutropha C91 plasmid1, complete sequence (length 65132) TERM 1 2794 - 2805 + G 78 -2.2 -5.29846 | overlap 2788 CTGAATTGGGCAAAG CGGT CAAA ACTG TTTTTCTTTGCCGTT Neut_2533 222 - 3155 + | transposase Tn3 family protein TERM 2 3144 - 3159 + T 72 -7.6 -4.07687 | GATATGACTGCACGA CTTCCT TTGT AGGAAG TTTTCGACAAACCAT Neut_2534 3731 - 3243 - | deoxyribonuclease I TERM 3 3462 - 3477 + g 70 -4.7 -4.68593 | opp_overlap 3460 CTCCCACTCAATACG TGCTG CACGGT CAGCA TTTTTACGTGGTACG Neut_2535 4745 - 3789 - | hypothetical protein TERM 4 4132 - 4146 + g 70 -4.2 -4.73677 | opp_overlap 4121 4125, overlap 4133 CAGAGATACAGTAGT ACCGAT ATG ATCGGG TTTATTTCTTCTGAA TERM 5 4368 - 4358 - G 70 -3.2 -4.78149 | CCCAGAACCCAAAAA GAGA TTC TCCC ATCCATTGTGATTCT Neut_2536 5544 - 4732 - | hypothetical protein TERM 6 5556 - 5595 + H 82 -8.2 -4.5442 | opp_overlap 5563 5566, overlap 5560 5563 TCATGGTTGAAGGTT TTTATAATAATAGTAGTA ATAT TACTACTATTATTATTAC TTTTCTACTTAAAAG TERM 7 5560 - 5591 + H 100 -13.4 -3.78909 | opp_overlap 5563 5566, overlap 5556 5563 GGTTGAAGGTTTTTA TAATAATAGTAGTA ATAT TACTACTATTATTA TTACTTTTCTACTTA TERM 8 5588 - 5563 - H 80 -10.7 -3.30159 | opp_overlap 5560 5556 5563, overlap 5566 TGAAGGTTTTTATAA TAATAGTAGTA ATAT TACTACTATTA TTATTACTTTTCTAC TERM 9 5563 - 5588 + H 86 -10.7 -3.9978 | opp_overlap 5563 5566, overlap 5560 5556 TGAAGGTTTTTATAA TAATAGTAGTA ATAT TACTACTATTA TTATTACTTTTCTAC TERM 10 5585 - 5566 - H 71 -8 -3.79113 | opp_overlap 5563 5560 5556, overlap 5563 AGGTTTTTATAATAA TAGTAGTA ATAT TACTACTA TTATTATTACTTTTC Neut_2538 5945 - 6559 + | resolvase domain-containing protein Neut_2539 8207 - 6945 - | conjugation TrbI family protein Neut_2540 8761 - 8303 - | conjugal transfer TrbH family protein Neut_2541 9339 - 8758 - | conjugal transfer protein TrbG/VirB9/CagX TERM 11 9381 - 9436 + H 71 -4.1 -4.84527 | overlap 9384 TGAACTTTGTCTCTA CGATCGTATTG-GGCGTCTTGTTTGGG TATA CCCGAATGGGACGCCGTGATGAGA-CG TTTTTCGTGTCTCAA Neut_2542 9523 - 10083 + | resolvase domain-containing protein TERM 12 11579 - 11614 + G 74 -4.7 -4.86621 | gap 2 ATCGCCAATGAGTTA GCGA-C-CCCGCTGGCA AAGC TGCCAGCCGAAGATCGC TTTTTCATTGACCAT Neut_2543 10067 - 11722 + | integrase catalytic subunit TERM 13 12510 - 12467 - g 70 -9.6 -3.24365 | gap 1, opp_overlap 12501, overlap 12465 TCAGATCGGAGAACA GCCGGTCACGGCAGCACTGAT GGA ATCCGTGCTATCGCGAC-AGC TCGATGACTTGGAGC Neut_2544 11712 - 12680 + | AAA ATPase Neut_2545 12800 - 15715 + | UvrD/REP helicase TERM 14 16819 - 16802 - g 71 -10.5 -3.07355 | opp_overlap 16803 TGGAAAGAATAATTA CCGCCGG ATGC CCAGCGG GCGGCGTTGTCCTGG Neut_2546 15715 - 17703 + | DNA methylase N-4/N-6 domain-containing protein Neut_2547 17693 - 20386 + | hypothetical protein Neut_2548 21059 - 20607 - | mating pair formation protein TrbG TERM 15 20865 - 20877 + g 75 -10.5 -3.36175 | AACGTTTCCATCCTC GCCGC GAC GCGGC TTGTCAGGGTTTGTT Neut_2549 21765 - 21073 - | conjugal transfer protein TERM 16 21200 - 21213 + g 71 -6.7 -4.12902 | GACGCCTGATATTGC CTGGT ATCA ACCAG TTTTCCAGATCGTTG TERM 17 21392 - 21414 + g 82 -7 -4.89393 | TCCGGGTAAGTCATC GCATAGGTTG TAT CAATCAATGC TTTTTGTGCGCTTTG Neut_2550 23334 - 21880 - | trbL protein TERM 18 23357 - 23343 - R 80 -8.6 -4.21768 | CAACCAACCCGAAAA GGCAAA ATA TTTGCC TACGATCTAGCGTTT Neut_2551 24386 - 23637 - | TrbJ protein Neut_2552 26862 - 24364 - | CagE, TrbE, VirB component of type IV transporter system TERM 19 24947 - 24924 - G 70 -8.8 -3.51637 | opp_overlap 24919, overlap 24925 ACAGATACAGGAGAA CGGGAAGTGC ATTA GCCCTTCCCA TTGACATTAATTCCT Neut_2553 27194 - 26877 - | conjugal transfer TrbD family protein Neut_2554 27652 - 27197 - | conjugal transfer protein TrbC TERM 20 27432 - 27394 - G 79 -11.1 -3.50393 | gap 1 CTCCACCCCATATAA GGGTTGCTC-CACAGGCA ATAA TGCCTAAAAGAGCAACCC CGAAAGCAACTGGGC Neut_2555 28627 - 27662 - | type II secretion system protein E TERM 21 27776 - 27766 - G 74 -2.6 -5.06414 | CCTTGGCAACAAAAA TAAT GAC ATTA ATTGCTGCCGCTATC Neut_2556 28982 - 28725 - | XRE family transcriptional regulator TERM 22 29180 - 29163 - g 70 -4.9 -4.67109 | GAAAACAAAAAAAGA CCTATCT GATC AGATAAG CAAGATACAACGTAA TERM 23 29296 - 29280 - g 80 -9.5 -4.09511 | AATAGGCGCCCAAAA GGATATG CGA CATATCC CAAACGATTACGCAC TERM 24 29570 - 29547 - g 93 -8.8 -5.00616 | opp_overlap 29557 29562, overlap 29548 GGGCTGGCCAAAAAA TGGGCGCAAT TACG ATCGCGCCCG CGAATGTATTTCACG TERM 25 29569 - 29548 - g 82 -12.3 -3.60048 | opp_overlap 29557 29562, overlap 29547 GGCTGGCCAAAAAAT GGGCGCAAT TACG ATCGCGCCC GCGAATGTATTTCAC Neut_2557 29038 - 30006 + | TrfA family protein TERM 26 30042 - 30061 + T 76 -10.8 -3.06261 | opp_overlap 30039 30038 30035 AAAATAAATCAGGGG TGCGCAAA GGCG TTTGCGCA TCTTCAGAGTTCAAA Neut_2558 31382 - 30612 - | hypothetical protein Neut_2559 31462 - 31689 + | transcriptional regulator/antitoxin, MazE Neut_2560 31686 - 32075 + | death-on-curing family protein Neut_2561 36691 - 32150 - | type III restriction enzyme, res subunit TERM 27 35745 - 35761 + g 71 -5.1 -4.46072 | opp_overlap 35746, overlap 35746 CCAAACATTTCTGAA ATCAGCT TCG AGCTGAC TTTGTGTTTGTTGCC TERM 28 36136 - 36154 + g 71 -6.7 -4.18488 | opp_overlap 36149, overlap 36137 36152 CGTAAATACGCGGAG TGGCTGT CATAT ACAGCCG TTTATTCCCCTGGAT TERM 29 36274 - 36292 + g 73 -8.8 -3.68936 | opp_overlap 36269 36273 36270, overlap 36273 TCAGATCAAAGGCAG GCAGGGGG TGC CCTTCTGC TTGTTGCGCTTCGTG Neut_2562 39840 - 36868 - | transposase Tn3 family protein Neut_2563 40400 - 39843 - | resolvase domain-containing protein TERM 30 39955 - 39968 + g 76 -6.7 -4.49556 | AACTCGGCAATTTGT TCGCT GTTC AGCGA TTTCTTTCGTCCCCG Neut_2564 40742 - 40530 - | hypothetical protein Neut_2565 41044 - 40808 - | putative mercury resistance protein Neut_2566 41406 - 41041 - | transcriptional regulator MerD Neut_2567 43106 - 41424 - | putative mercuric reductase TERM 31 42028 - 42052 + g 73 -12.1 -2.61695 | overlap 42027 42026 TTCGGTGCCCTGCCA GTGGCGACCAG CAG CTGGTCGGCGC GTATTTCACCGTACC TERM 32 43127 - 43151 + r 81 -10.8 -3.42663 | gap 1, overlap 43125 CGTTCCTTTTCGTTT CGGC-AACTGC CAAT GCAGTTAGCCG TGTTTGGGTGGTAGT Neut_2568 43552 - 43145 - | putative mercury transport protein MerC Neut_2569 43855 - 43580 - | mercuric transport protein periplasmic component Neut_2570 44221 - 43871 - | putative mercuric transport protein TERM 33 44052 - 44036 - G 90 -9.4 -4.62069 | CCGCCAGGCGAAAAA CAGCGC GACCA GCGCTG CGCCGATGAAGATCG TERM 34 44154 - 44134 - G 79 -8.1 -4.28361 | CCAAGGCGATCAAAA CCAGCGGCC CCA GGCAGCAGG CCGACGCAAGAATGG TERM 35 44470 - 44484 + G 79 -11.4 -3.59979 | opp_overlap 44468 CGGTTCGTGAAATCG GCCCAG CGG CTGGGC TTTAGCCTGGACGAA Neut_2571 44293 - 44748 + | putative transcriptional regulator MerR Neut_2572 45192 - 44755 - | helicase domain-containing protein Neut_2573 46072 - 45440 - | hypothetical protein TERM 36 46184 - 46161 - g 70 -11.1 -2.56124 | opp_overlap 46165 46177, overlap 46160 46158 GGTACTGAAATATAG CCAACCTGT TCCTGT ACAGGTTGG TGAACCTGTTTATAT TERM 37 46177 - 46192 + G 74 -7.6 -4.22041 | opp_overlap 46161 46160 46158, overlap 46165 CAACCTGTTCCTGTA CAGGTT GGTG AACCTG TTTATATTCCGCTTT Neut_2574 46129 - 46572 + | putative prophage repressor TERM 38 46762 - 46786 + G 70 -9.3 -3.57309 | opp_overlap 46768, overlap 46768 CAGATCAAGCATCTG GAGCAATCAGC CGG GCTGGTTTCTC TTTCACCCAATTTTC TERM 39 47068 - 47046 - g 79 -9.1 -4.1399 | GGATGCAGACAGAAA GCCAGGCAG CTACC CTACCCGGC TGGCACAAGTTTGCA Neut_2575 46579 - 47874 + | DNA-directed DNA polymerase Neut_2576 48413 - 47973 - | hypothetical protein Neut_2577 49139 - 48429 - | transfer origin protein, TraL TERM 40 49514 - 49538 + H 83 -7.2 -4.88228 | opp_overlap 49518 GCCCTCCTTTGTTAA GCAACTATCA GCAAA TGATAGATGC TTTTTGATATTAAAT TERM 41 49858 - 49834 - g 100 -7.8 -5.59564 | gap 1, overlap 49835 AGAAATCTAAAAAAA CCCCACGGTGG TCGT CCACGG-GGGG TTCACATCAAAGTAT TERM 42 49858 - 49835 - g 72 -8 -3.93298 | overlap 49834 GAAATCTAAAAAAAC CCCACGGTGG TCGT CCACGGGGGG TTCACATCAAAGTAT Neut_2578 49795 - 50190 + | TraJ protein TERM 43 50435 - 50460 + G 71 -7.7 -4.08216 | opp_overlap 50434 50429 ACAAGATCAGGCAAG GAAAAAACCTA TCAT TTGGTTTTTTC TTTTCCGCCAGGTGA TERM 44 52111 - 52088 - g 74 -2.3 -5.08824 | overlap 52093 52098 CTTTTATTGAAAAAA GGGAATGAC ATGCTG GTCAAGCCC TGCAGCTCAAGAGTG Neut_2579 50171 - 52219 + | relaxase/mobilization nuclease family protein Neut_2580 52240 - 54159 + | TRAG family protein Neut_2581 54156 - 54716 + | Type IV secretory pathway protease TraF-like TERM 45 55141 - 55157 + G 80 -10.1 -4.0641 | opp_overlap 55141 55134 CATGACAATGAGCAA GCAGCCT TGT GGGCTGC TTTGTCTGCCTACAA TERM 46 55347 - 55337 - g 76 -6.8 -4.54205 | opp_overlap 55337 55336 ATGACAGCAAAGAAA CGGT GAT ACCG GTTATCAGCCAGTCG Neut_2582 54793 - 55551 + | lytic transglycosylase, catalytic TERM 47 57933 - 57909 - g 74 -8.6 -4.05677 | gap 1, opp_overlap 57908 AAAGAAGCCAAAGAA TTGCG-CGAGG CAGA CCCCGACGCAA GGGTTTTTAAATCAG TERM 48 58480 - 58468 - g 83 -3.4 -5.49729 | AAGCATCCAAAAAAA TGCT TACAG AGCA GCTGGCTTTAGCAAA Neut_2583 55554 - 58736 + | hypothetical protein TERM 49 58761 - 58774 + F 100 -2.4 -5.9362 | opp_overlap 58760 58761 ATAGCCAACCATAAC TCTG GTAGAG CAGA TTTTTTTGTGTTTTG Neut_2584 58940 - 59557 + | cobyrinic acid a,c-diamide synthase Neut_2585 59554 - 59832 + | hypothetical protein Neut_2586 60226 - 60002 - | hypothetical protein TERM 50 60876 - 60840 - g 70 -10.3 -2.981 | gap 3, overlap 60839 TTTGAACGCAGAAAT CCGCTGGATGGCAGCGTG GCTA CACGC-GC-A-CCAGCGG CCACCGCTGATGATG TERM 51 60909 - 60922 + G 74 -9.5 -3.54424 | GTACGGGCCGTTGAG GCGGC CCAG GCCGC TTTCCCCGCATGGGC Neut_2587 60780 - 62216 + | aldehyde dehydrogenase TERM 52 62653 - 62669 + T 100 -3.7 -5.80248 | opp_overlap 62652 62653, overlap 62644 ACTGGACATAAAAAG GCTATAA CAG TTACAGC TTTTTTTATGTATTG Neut_2588 64320 - 63109 - | hypothetical protein SEQUENCE gi|114326611|ref|NC_008342.1| Nitrosomonas eutropha C91 plasmid2, complete sequence (length 55635) Neut_2589 344 - 706 + | mobilisation protein TERM 1 936 - 920 - g 70 -11.5 -2.60283 | overlap 919 917 CACGGAAAGCAATAC CCCGGCC CAG GGCCAGG TGAATCTGAAAACGA TERM 2 1676 - 1656 - g 77 -9.7 -3.73534 | CAATTGGATGAACAA GGCAAGACA GAC TGGCTTGCC GAAAAACGGCAACAA TERM 3 2515 - 2499 - g 71 -7.2 -4.11216 | overlap 2510 GCGTCACGGCTAAAA GCCGAG ACAAA CCCGGC GCTGGTGATCGAGGC TERM 4 3083 - 3112 + G 73 -5.5 -4.63218 | gap 1, opp_overlap 3083, overlap 3084 ACTGCGAAAAATGCA GCAGGCCCAGCCCG AGA CAGGC-GGGCCGGA TTTTGTTCAAGGCCA TERM 5 3122 - 3159 + G 73 -12 -2.59881 | overlap 3121 GCCGGATTTTGTTCA AGGCCAGGGCGAAGAC AAGCCC GTTTTCGCCCTGCCCA ATTATCGCGTAGATA TERM 6 3352 - 3379 + G 76 -8.4 -4.13767 | opp_overlap 3349 3352 TCAAGCAGCAAATGA TCGAGGCCGC ACGGCGCA GCGGCCTGGA TTTTGAAATCAAAGA Neut_2590 690 - 3452 + | hypothetical protein TERM 7 3679 - 3698 + T 95 -10.7 -4.62069 | opp_overlap 3679 TTTTAAAGAAAAAAA GCCCTGC AATAAC GCAGGGC TTTTTCAACTGGCGA TERM 8 3698 - 3679 - T 100 -11.4 -5.95539 | opp_overlap 3679 TTTTAAAGAAAAAAA GCCCTGCA ATAA CGCAGGGC TTTTTCAACTGGCGA Neut_2591 4265 - 3744 - | TrbM family protein TERM 9 5249 - 5237 - g 71 -6.2 -4.37092 | ATTTCTGCCAGAAAA CCCG TATGG CGGG CTGTCAGCGGTTCCA Neut_2592 4541 - 5347 + | cobyrinic acid a,c-diamide synthase Neut_2593 5344 - 5715 + | hypothetical protein TERM 10 6577 - 6555 - g 72 -4 -4.90525 | opp_overlap 6560, overlap 6558 TAAGGTCAAAGAAAA CCAGGCCACG CCG CGTAACCGAG ACGCCGGGGTACCCG Neut_2594 5740 - 6897 + | parB-like partition proteins TERM 11 6986 - 6945 - g 86 -5.7 -5.1101 | opp_overlap 6951, overlap 6946 6955 TTATTATTCAAAAAA CCGGATGCAAGCGCCCGAC TTTG ATCGGGCGCTTGCTTTTAC ACGTACACGCGAGAA TERM 12 6985 - 6946 - g 73 -9.2 -3.65883 | opp_overlap 6951, overlap 6945 6955 TATTATTCAAAAAAC CGGATGCAAGCGCCCGAC TTTG ATCGGGCGCTTGCTTTTA CACGTACACGCGAGA TERM 13 6951 - 6980 + G 100 -19.4 -4.11216 | opp_overlap 6946 6945 6955 TTCAAAAAACCGGAT GCAAGCGCCCGA CTTTGA TCGGGCGCTTGC TTTTACACGTACACG TERM 14 6976 - 6955 - g 81 -13.7 -3.10082 | opp_overlap 6951, overlap 6946 6945 AAAAACCGGATGCAA GCGCCCGAC TTTG ATCGGGCGC TTGCTTTTACACGTA Neut_2595 6910 - 7572 + | hypothetical protein TERM 15 7679 - 7667 - f 82 -10.5 -4.06384 | opp_overlap 7678, overlap 7668 GGCGAACATGATAAA CGCGC GAG GCGCG CCCAGGTCGTATCTC TERM 16 7680 - 7668 - f 73 -10.5 -3.03348 | opp_overlap 7678, overlap 7667 GCGAACATGATAAAC GCGCG AGG CGCGC CCAGGTCGTATCTCT TERM 17 7816 - 7796 - f 76 -10.4 -3.27704 | opp_overlap 7812, overlap 7791 ACGCTCTAAATCCAA GGCAGGCG CTGCT CACCTGCC ATAGCGGTTTCCGCT Neut_2596 8104 - 8364 + | hypothetical protein TERM 18 8721 - 8739 + F 77 -10.2 -3.48276 | opp_overlap 8714 8722, overlap 8722 AGACTAAACCAGCCA AGTGCCCC GAA GGGGCACC TTATCTGCCAAAACC TERM 19 8722 - 8738 + F 86 -13.7 -2.68823 | opp_overlap 8722 8714, overlap 8721 GACTAAACCAGCCAA GTGCCCC GAA GGGGCAC CTTATCTGCCAAAAC TERM 20 8738 - 8722 - f 93 -13.7 -3.17054 | opp_overlap 8721 8722, overlap 8714 GACTAAACCAGCCAA GTGCCCC GAA GGGGCAC CTTATCTGCCAAAAC Neut_2597 8770 - 9315 + | hypothetical protein TERM 21 9395 - 9436 + F 87 -11.3 -3.60234 | gap 1, opp_overlap 9404 CTCTCGTGTTGACTC TTG-AGATAATCACTTTAAT CTA ATTAAAGTGATTATCTGCCA TTTCAGGATATATCC TERM 22 9426 - 9404 - f 81 -10.8 -3.48924 | opp_overlap 9395 TGACTCTTGAGATAA TCACTTTAAT CTA ATTAAAGTGA TTATCTGCCATTTCA TERM 23 9840 - 9819 - g 71 -5.1 -4.51994 | gap 1, overlap 9822 GGAATGAACAACAAA TCAGCCTGGC ACG GACAGGC-GA AAAACAGATCCACCT Neut_2598 9458 - 9889 + | hypothetical protein Neut_2599 10042 - 10338 + | hypothetical protein TERM 24 10754 - 10764 + G 76 -5.4 -4.82901 | opp_overlap 10701 10754 GAGCAAACCACGAAA TGCA CAC TGCA TTTTTCTACCGGCCA TERM 25 11050 - 11036 - g 70 -10 -3.30007 | AATATGGCGCTAGAA TTGGCC TCG GGCCAA TATCAAGCGATGGGA Neut_2600 10664 - 11110 + | hypothetical protein TERM 26 11247 - 11213 - f 72 -10.1 -2.86391 | overlap 11210 AGCAGCGAAAGAGCA GCCTACACAAATCAT TCTGG ACGAATTGCGTAGGC GATGCCAATCAGAGG Neut_2601 11525 - 12046 + | DNA repair protein RadC TERM 27 12067 - 12084 + F 100 -4.8 -6.23209 | opp_overlap 12067 TCGCCAATAAAAAAG CATCCC ACAAAA GGGGTG TTTTTTTTTGCTTCA Neut_2602 12676 - 13473 + | hypothetical protein TERM 28 13498 - 13481 - T 82 -12.7 -2.84574 | opp_overlap 13480, overlap 13478 GACTTTAACTAACCA CCCCGCT CCGA AGCGGGG ATATCATTCACACGG Neut_2603 17117 - 14424 - | hypothetical protein Neut_2604 19095 - 17107 - | DNA methylase N-4/N-6 domain-containing protein TERM 29 17991 - 18008 + g 71 -10.5 -3.07355 | opp_overlap 17985 CCAGGACAACGCCGC CCGCTGG GCAT CCGGCGG TAATTATTCTTTCCA Neut_2605 22010 - 19095 - | UvrD/REP helicase Neut_2606 23098 - 22130 - | AAA ATPase TERM 30 22300 - 22343 + g 70 -9.6 -3.24365 | gap 1, opp_overlap 22296, overlap 22298 GCTCCAAGTCATCGA GCT-GTCGCGATAGCACGGAT TCC ATCAGTGCTGCCGTGACCGGC TGTTCTCCGATCTGA Neut_2607 24743 - 23088 - | integrase catalytic subunit TERM 31 23231 - 23196 - G 74 -4.7 -4.86621 | gap 2 ATGGTCAATGAAAAA GCGATCTTCGGCTGGCA GCTT TGCCAGCGGG-G-TCGC TAACTCATTGGCGAT Neut_2608 25287 - 24727 - | resolvase domain-containing protein TERM 32 25429 - 25374 - R 71 -4.1 -4.84527 | overlap 25376 TTGAGACACGAAAAA CG-TCTCATCACGGCGTCCCATTCGGG TATA CCCAAACAAGACGCC-CAATACGATCG TAGAGACAAAGTTCA Neut_2609 25970 - 25611 - | hypothetical protein Neut_2610 26736 - 26077 - | Crp/FNR family transcriptional regulator TERM 33 26582 - 26602 + g 82 -3.9 -5.24129 | CCCTGTTTGGTGAGA TGGGAAAGT TTG ACGATCCCA TTTTTTATCCAGAAA Neut_2612 27307 - 27921 + | resolvase domain-containing protein Neut_2613 28006 - 28644 + | hypothetical protein Neut_2614 29882 - 28824 - | deoxyribonuclease I TERM 34 28855 - 28865 + g 74 -6.8 -4.40561 | overlap 28840 28861 GCCAGGCGATACCCG GCTG CTT CAGC TTCTTTTTGCGAAGA TERM 35 29953 - 29974 + H 71 -9.5 -3.11291 | overlap 29946 TAAACTGTCTTGGTG TCGGAAAAC ATGT GTTTTCCGG TATTCAAATTGTCCA Neut_2615 30116 - 30400 + | plasmid maintenance system killer TERM 36 30588 - 30608 + GF 80 -9 -4.08692 | gap 1 ATCAGGCTGGAAGCG GCGGGC-GT CAGT ACAGCCCGC TTTTGGACGGCATTG Neut_2616 30372 - 30725 + | XRE family plasmid maintenance system antidote protein TERM 37 30731 - 30759 + F 95 -13.3 -3.2963 | opp_overlap 30729 30728 GCAGGGATAGAAGGT GGGCCTGAATA CTTGCGA TATTCAGGCCC TTGTCGCGGACTCAT TERM 38 31148 - 31169 + G 90 -9.3 -4.72631 | overlap 31151 TTTTGTTTTAGGGCG GCGGCGCGG TGGC CCGCGCTAC TTTTATTCAGTTGAT TERM 39 31151 - 31166 + G 79 -11.8 -3.27212 | overlap 31148 TGTTTTAGGGCGGCG GCGCGG TGGC CCGCGC TACTTTTATTCAGTT Neut_2617 30993 - 31316 + | partition protein C TERM 40 31350 - 31321 - f 100 -18 -4.46155 | opp_overlap 31327, overlap 31327 GAGACATTTAGAAAA GCAAAAGCCCCG TGGCAT CGGGGCTTTTGC AAAACTCAGGAACAC TERM 41 31344 - 31327 - f 91 -9.8 -4.73108 | opp_overlap 31327, overlap 31321 TTTAGAAAAGCAAAA GCCCCG TGGCAT CGGGGC TTTTGCAAAACTCAG TERM 42 31327 - 31344 + F 81 -9.8 -4.08767 | opp_overlap 31327 31321 TTTAGAAAAGCAAAA GCCCCG TGGCAT CGGGGC TTTTGCAAAACTCAG TERM 43 31564 - 31577 + G 100 -3.8 -6.08563 | AGGGCGTATCATGAC CCTG AACAGG CAGG TTTTTTTTCTATCTT TERM 44 32507 - 32497 - g 74 -6.8 -4.2803 | TATTCCAAGGCAAAA GCCT ACG AGGC GGGCGAGAAAGTCAG Neut_2618 31501 - 32859 + | hypothetical protein TERM 45 32900 - 32912 + F 73 -10.5 -3.11208 | overlap 32897 32905 GCGAAGCCTACGCCC GGCCC GTA GGGCC TGCTTTTGCGTAGCC TERM 46 32996 - 33016 + F 79 -6.7 -4.62302 | opp_overlap 32985, overlap 32998 GTTATCCATGCCCCG CGCAGTGCC GAA GGCACGGAG TTTTTCAGGATGTTC Neut_2619 33078 - 33383 + | hypothetical protein TERM 47 33402 - 33390 - T 71 -4.9 -4.5287 | overlap 33394 TCAAATTAATCAAAA TTTAG CCG CTAAA AATCTGGCGGCTGGC TERM 48 33675 - 33657 - T 70 -6 -4.17132 | opp_overlap 33657 33655 AAAGTCGGTAACAAA TTGTGGTT TAC AACCGCAA TATTATGTCTTTCCT Neut_2620 35416 - 33824 - | hypothetical protein TERM 49 34622 - 34606 - G 80 -2.9 -5.24129 | opp_overlap 34621 GTCCGTGATAAAAAA TGGTCGG ATT CCAAGCA AGCACCCTTGTTTCA TERM 50 35025 - 35003 - G 76 -5.7 -4.74504 | gap 1, opp_overlap 35003 35003 AGCCCAACGCAAAAA TCCAAAAGTC TCGG GACTTT-GGA ATATTAATTGCGCAT TERM 51 36552 - 36534 - g 74 -8.1 -4.11216 | gap 1 TGCGGAGCTGGAAAA GGC-GCGG GATG CCGCCGCC GAGGTTGTCGCAAAA Neut_2621 36370 - 36804 + | hypothetical protein TERM 52 36908 - 36926 + T 79 -11.6 -3.0634 | TCATTGACACTTGAG GGGCGGGC TAT GCCCCCCC TCTTGGCGTCCAATT Neut_2622 38280 - 36985 - | DNA-directed DNA polymerase Neut_2623 38689 - 38312 - | hypothetical protein Neut_2624 39116 - 38712 - | putative prophage repressor Neut_2625 39667 - 40011 + | hypothetical protein TERM 53 40177 - 40202 + T 74 -10.4 -3.20361 | opp_overlap 40168 40179, overlap 40179 TAATATCTGTCTTTA AACAGGGCGG ATACTC CCGCCCTGTA TTGAATTGGGGTTTT TERM 54 40179 - 40200 + T 91 -13 -3.15621 | opp_overlap 40168 40179, overlap 40177 ATATCTGTCTTTAAA CAGGGCGG ATACTC CCGCCCTG TATTGAATTGGGGTT TERM 55 40200 - 40179 - T 100 -13.7 -3.53563 | opp_overlap 40179 40177, overlap 40168 ATATCTGTCTTTAAA CAGGGCGGA TACT CCCGCCCTG TATTGAATTGGGGTT Neut_2626 41391 - 40261 - | hypothetical protein Neut_2627 41706 - 41464 - | hypothetical protein Neut_2628 43733 - 41733 - | TRAG family protein Neut_2629 44844 - 43726 - | type II secretion system protein E TERM 56 44241 - 44276 + g 70 -9.9 -3.22653 | gap 1, overlap 44239 GGGCTTTCATCACGG TTGTTTT-TCCGGAGC CAGTA GCCCCGGACAAAACAA TATTCTGGCGGTACT TERM 57 44283 - 44299 + g 79 -9.4 -4.16016 | ACAAAACAATATTCT GGCGGT ACTGA ACCGCC TTTGTTAGAAACTCA Neut_2630 45978 - 44848 - | conjugation TrbI family protein TERM 58 45863 - 45849 - G 81 -6.4 -4.92783 | overlap 45861 AAGCCACGAGAAAAA CACCGA ACA TCAGTG CCAGGGTAAATACCC TERM 59 45881 - 45898 + g 74 -4.1 -4.98531 | opp_overlap 45861 AGGGTAAATACCCTG GAGCG CAACACCC CGCTC TTTTTGGTTTCGCCC Neut_2631 46730 - 45975 - | conjugal transfer protein TrbG/VirB9/CagX TERM 60 46311 - 46288 - G 80 -10.4 -3.67775 | gap 1, opp_overlap 46289, overlap 46289 46292 AGCTCCATCGAATAA CTCATGTTCGC CTG GCGAACATG-G TCTTGAGTAGCGTTT TERM 61 46289 - 46311 + g 79 -12.8 -3.10071 | opp_overlap 46288 46289 46292 GCTCCATCGAATAAC TCATGTTCGC CTG GCGAACATGG TCTTGAGTAGCGTTT Neut_2632 47437 - 46727 - | VirB8 family protein Neut_2633 48965 - 47799 - | TrbL/VirB6 plasmid conjugal transfer protein Neut_2634 49306 - 48977 - | hypothetical protein TERM 62 49305 - 49293 - G 84 -4.9 -5.26875 | GCCCCAATCAAAAAA TGAAA TTT TTTCA TCTCAAACTCCCAAA Neut_2635 50016 - 49303 - | type IV secretion system family protein TERM 63 49612 - 49659 + g 100 -5.1 -5.75599 | gap 3, opp_overlap 49604 GGCATAAGCCTGAGC CTGGCATTGCAGCTTCGCATTTGA ATC TTGAAAGCGA-GC-GCAAT-CCAG TTTTTTTATGGTTTC Neut_2636 52433 - 50013 - | type IV secretion/conjugal transfer ATPase TERM 64 51176 - 51186 + g 72 -8.2 -3.90943 | ATAATGTCACCGCTT CCCC CCA GGGG TTTCCATTTCGTTTG TERM 65 51856 - 51840 - G 80 -10.9 -3.71645 | opp_overlap 51838 AAGCTGACAGCTAAA TGTTCGC CCC GCGAACA CGTAATTGCCCAGTT TERM 66 52344 - 52361 + g 70 -9.9 -3.27774 | opp_overlap 52339 52338 GCTTGAAAATGGCAC GATTCGC TCTA GCGAATC TTCCTCATTGGCATA Neut_2637 52755 - 52435 - | type IV secretory pathway, VirB3 family protein Neut_2638 53059 - 52760 - | hypothetical protein Neut_2639 53729 - 53052 - | lytic transglycosylase, catalytic TERM 67 53914 - 53900 - R 72 -10 -2.88822 | TCCGTGATACAAGCA TTGCGC AAG GCGCAA AAAAGGCGGCATAGA TERM 68 53918 - 53936 + r 70 -7.3 -3.90744 | opp_overlap 53919, overlap 53919 CGCAAGGCGCAAAAA AGGCGGC ATAGA GCCGCCG TTCTTTACAAACAAA TERM 69 53935 - 53919 - R 100 -10.8 -5.055 | opp_overlap 53918 53919 GCAAGGCGCAAAAAA GGCGGC ATAGA GCCGCC GTTCTTTACAAACAA TERM 70 53919 - 53935 + r 75 -10.8 -2.94232 | opp_overlap 53919, overlap 53918 GCAAGGCGCAAAAAA GGCGGC ATAGA GCCGCC GTTCTTTACAAACAA Neut_2640 54388 - 53981 - | hypothetical protein TERM 71 54330 - 54363 + g 77 -9.6 -3.72324 | AAAAGTTTTTGTACA TCGAGGAGCAAGTC GGCATG GACTTGCTCCAAGA TTGTTGATGCAGGTC Neut_2641 55085 - 54381 - | hypothetical protein SEQUENCE gi|114330036|ref|NC_008344.1| Nitrosomonas eutropha C91, complete genome (length 2661057) Neut_0001 35 - 1414 + | chromosomal replication initiator protein DnaA Neut_0002 1619 - 2740 + | DNA polymerase III, beta subunit gyrB 2798 - 5227 + | DNA gyrase subunit B Neut_0004 5248 - 5691 + | hypothetical protein Neut_0005 5747 - 6478 + | pseudouridine synthase, Rsu TERM 1 6655 - 6639 - f 74 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 2 6753 - 6735 - f 85 -10.2 -4.21275 | opp_overlap 6737, overlap 6737 GTAAGTCATTGAAAA CAGGGGCC TTT GGCCCCTT TTTCATTCCAGTGAC TERM 3 6737 - 6751 + F 100 -12.8 -4.87291 | opp_overlap 6735 6737 AAGTCATTGAAAACA GGGGCC TTT GGCCCC TTTTTCATTCCAGTG TERM 4 6751 - 6737 - f 95 -12.8 -3.70331 | opp_overlap 6737, overlap 6735 AAGTCATTGAAAACA GGGGCC TTT GGCCCC TTTTTCATTCCAGTG TERM 5 8605 - 8582 - g 71 -5.3 -4.45168 | overlap 8578 CCGCTAAAACAGAAA CTGGTTCAG GTGCTT CTGAAGCAG TGTCCAGATACCGAC Neut_0006 6914 - 8767 + | phage integrase family protein Neut_0007 8854 - 9228 + | transcriptional regulator, LysR family protein Neut_0008 10381 - 9722 - | transcriptional regulator, LysR family protein Neut_0009 10750 - 11052 + | transcriptional regulator, XRE family protein Neut_0010 12452 - 11619 - | redoxin domain-containing protein Neut_0011 13648 - 12740 - | transcriptional regulator, LysR family protein TERM 6 13591 - 13548 - G 79 -12.5 -3.05463 | gap 3 AGCTCCTTGATGGAA CGCGACAGC-G-GCGACTGCTC AAT GTGCAGCCGCTCAGCTG-CGCG AGTGAAGTGTAACTC Neut_0012 13786 - 14109 + | transposase IS3/IS911 family protein TERM 7 14239 - 14223 - g 74 -10.1 -3.56568 | CAACGATGCCCGAAA CTGCGCA GTG CGCGCAG CCAGCGCGACGAGGG TERM 8 14849 - 14866 + G 76 -12.7 -2.64794 | GATTCATCGCCGAGC GCCCTGG AAAA CCAGGGC TGCTGTGGAATTGGC Neut_0013 14163 - 15014 + | integrase catalytic subunit Neut_0014 17298 - 15676 - | twin-arginine translocation pathway signal TERM 9 16094 - 16112 + g 71 -7.4 -4.08945 | CGATTGACGGCATCC TCAACTGG TAG CCAGGTGA TTTTGGACAACTGCT Neut_0016 17925 - 18395 + | transposase, IS4 family protein Neut_0017 20027 - 18615 - | heavy metal sensor signal transduction histidine kinase Neut_0018 20716 - 20033 - | two component heavy metal response transcriptional regulator, winged helix family protein TERM 10 20663 - 20682 + g 76 -4.2 -5.03405 | overlap 20664 GGACTCAACCAGCCC TTGGCGTA CGTA TTCGCCAG TTTTTATCTCATCTT TERM 11 20918 - 20889 - R 91 -12.9 -3.14881 | gap 1, opp_overlap 20889 20889, overlap 20891 GAATTCTTTTATGAA CAGC-GCGCAGACG TTC CGTCTGCGCGGCCA GTTACTTGGCGCACG TERM 12 20915 - 20891 - R 100 -15.7 -3.13522 | opp_overlap 20889 20889, overlap 20889 ATTCTTTTATGAACA GCGCGCAGACG TTC CGTCTGCGCGG CCAGTTACTTGGCGC TERM 13 21078 - 21065 - R 71 -2.3 -5.07053 | AAGCATGTCAAAAAA TGGGC TAGG GCTCA GCAGTTTAACGGTGC Neut_0019 21302 - 21102 - | heavy metal transport/detoxification protein Neut_0020 21966 - 22937 + | BNR repeat-containing glycosyl hydrolase TERM 14 24156 - 24118 - g 74 -11.6 -3.16881 | opp_overlap 24126 24127, overlap 24126 GACCTATTTGATGAA CGGCACAACCCCGGCCGG CAA CTGGACGGGATTATTCCG TCCCGGTGAGCGGGT TERM 15 24822 - 24808 - g 70 -11.4 -2.52464 | GGGTGGTGCAATGGA TCCGCG CGG CGCGGA GCGTGAAATTGAGCT Neut_0021 23288 - 25171 + | copper-resistance protein, CopA family protein TERM 16 25711 - 25740 + F 78 -11.5 -2.87132 | gap 1, opp_overlap 25711 25710 TCGGACATGCACAAC TTCGGGTCGGTTCG CTT CGA-CCGGCTCGAA TATGTCAAGGCGCGA TERM 17 26348 - 26367 + F 71 -5 -4.48792 | opp_overlap 26351, overlap 26351 AGCGGTTGTACCAGG GAACATCA CGCC TGATGCTC TTATTTTTCCCTTAT TERM 18 26774 - 26750 - g 76 -6.3 -4.73613 | overlap 26751 CCATGATGAAGAAAA TGCCAGGCATG AAA CATGCCGAGCC CAATATGATCTCGCT TERM 19 26773 - 26751 - g 72 -9.8 -3.43445 | overlap 26750 CATGATGAAGAAAAT GCCAGGCATG AAA CATGCCGAGC CCAATATGATCTCGC Neut_0023 26362 - 26910 + | blue (type1) copper domain-containing protein TERM 20 26995 - 27028 + F 79 -9 -3.90744 | gap 2, opp_overlap 26984 26983, overlap 26996 CAATGCGCTCCCCCA GTG--GGCAGCACTGC ATAC GCAGTGCTGCCAATAC TTATTTCCCCACACC TERM 21 26996 - 27025 + F 100 -16.5 -3.02371 | opp_overlap 26984 26983, overlap 26995 AATGCGCTCCCCCAG TGGGCAGCACTGC ATAC GCAGTGCTGCCAA TACTTATTTCCCCAC TERM 22 27676 - 27664 - g 70 -3.3 -4.7497 | opp_overlap 27665, overlap 27665 CCCATCCAGGAAAAA CGGCA ACT TGCCT CCTATGTCCAAAGAT Neut_0024 27112 - 27693 + | peptidase M23B Neut_0025 27775 - 28260 + | cytochrome c, class I Neut_0026 30666 - 28282 - | heavy metal translocating P-type ATPase TERM 23 29287 - 29275 - G 70 -9.1 -3.62597 | overlap 29277 29278 GGCATCCCGGAACAA GACGC CGT GCGTC GCACCACGACCAGTG TERM 24 31390 - 31403 + r 70 -6.7 -4.05208 | CCGATGACGCTGGTA TGACG AATA CGTCA TTATTTGGTCTACCT Neut_0028 32724 - 32488 - | putative mercury resistance protein Neut_0029 32966 - 32721 - | transcriptional regulator, MerR family protein TERM 25 32955 - 32977 + g 76 -7.6 -4.30576 | overlap 32958 CAGCCGGGACACTGT GTAGGCGCTC ATT GAGCACCTCC TTTTCCTCATCCGGC Neut_0030 34687 - 32984 - | putative mercuric reductase TERM 26 34028 - 34006 - G 74 -12 -2.73441 | opp_overlap 34009, overlap 34005 CACCACCGTTCAAAC GGACGACTAG GCG CTGGTCGTCC TTGAAACGCGCTTCA Neut_0031 34875 - 34684 - | hypothetical protein Neut_0032 35153 - 34878 - | mercuric transport protein periplasmic component Neut_0033 35519 - 35169 - | putative mercuric transport protein TERM 27 35348 - 35336 - G 71 -6.9 -4.26903 | GCCAGGCGACGAAAA GCGCC ACC AGCGC CACGCCGATAAAGAT TERM 28 35768 - 35782 + G 79 -11.4 -3.61178 | opp_overlap 35766 CGCTTTGTGAAATCG GCCCAG CGG CTGGGC TTTAGCCTGGATGAA Neut_0034 35591 - 36067 + | putative transcriptional regulator MerR Neut_0035 36191 - 36535 + | hypothetical protein Neut_0036 37344 - 36832 - | blue (type1) copper domain-containing protein TERM 29 36888 - 36858 - G 77 -12.6 -2.71364 | TCACCTTGCCAACCA TTCCTGCTTCCATG TGG CCTGGAAGCAGGCA GGCAAAATCAACAGT TERM 30 37350 - 37360 + r 72 -5.4 -4.46112 | opp_overlap 37350 37348 TTTTCATCATGAATA CTCT CCT AGAG TTTGTTTAGGTAGGC TERM 31 37450 - 37440 - R 74 -6.8 -4.37658 | opp_overlap 37439 AAGCCGGCCACAAAA CAGG CTT CCTG ATTCATAGCCTCAAG Neut_0037 38735 - 37785 - | glycosyl transferase, group 1 Neut_0038 40022 - 40306 + | hypothetical protein TERM 32 40352 - 40377 + T 100 -10.4 -5.79526 | GGATAGCGGTAGTCA CCGCGCACGG CTACAT TTGTGCGCGG TTTTTTTTCCAATGT Neut_0039 41783 - 40449 - | heavy metal sensor signal transduction histidine kinase Neut_0040 42472 - 41777 - | two component heavy metal response transcriptional regulator, winged helix family protein TERM 33 42690 - 42711 + r 82 -7.3 -4.6856 | opp_overlap 42690 AACTGCCACTAACAA TGGGATGGT CGCT ACCATCACA TTTTTGACATATTTA Neut_0041 43797 - 42775 - | glycosyl transferase family protein TERM 34 42927 - 42906 - G 77 -13.1 -2.71731 | overlap 42922 TGTACTCGCCAAGCA GCCCAATTG ACAG CAATTGGGC ACCACCAAGAAATGT TERM 35 43063 - 43036 - G 76 -8.4 -4.22591 | gap 1 AATAATGCCAAGAAA TGCCGTCAGCAGG CCT CCAGC-GACGACA AGGCGCAGCGGAGCG TERM 36 43850 - 43826 - H 71 -4.2 -4.78572 | gap 1, opp_overlap 43831, overlap 43827 43828 43830 TTGTAACGAATAAAA CTCATCACCGC AATT GCGGCGTTG-G TGTAGGAAACGAGCC TERM 37 43927 - 43910 - H 77 -7 -4.4959 | opp_overlap 43909 TCTAATTAAGCAAAA CCGTCA GTTCAG TGACGG CTCAATTACCTTTTT TERM 38 44272 - 44235 - H 70 -9.4 -2.85668 | opp_overlap 44233, overlap 44237 CATGGCGAGACGATA GACTTTTCCAGTAC-GCT GCCG AGCCGTACCGGA-AAGTC CATGTGTCGCTCGGC Neut_0042 44321 - 44866 + | hypothetical protein Neut_0043 45842 - 44910 - | cation diffusion facilitator family transporter TERM 39 45613 - 45585 - G 70 -8.7 -3.55444 | overlap 45592 CTTCCAGGTTCCAAA GGCGAAACGTCGA TCA TCGGCGTAGCGCC TGGCTGCGGCATATG Neut_0044 45858 - 46184 + | hypothetical protein TERM 40 46365 - 46349 - T 82 -7.3 -4.69664 | CAGACGATCCAAAAA GCCCAAA ACG TTTGAGC AGTGCCTGATCGTCG TERM 41 46417 - 46431 + T 76 -7.8 -4.23213 | GTCTTGGGCAGCACG GCGTCT TTG AGGCGC TTTCTTACCTGTGAG Neut_0046 46987 - 46787 - | hypothetical protein Neut_0047 47448 - 47236 - | hypothetical protein Neut_0048 48595 - 47909 - | multicopper oxidase, type 2 TERM 42 48067 - 48079 + g 76 -7.7 -4.30014 | TCTTCACGGCATCCC GGTTG TTC CAACC TTTTCCGTTGATACC TERM 43 48686 - 48702 + r 78 -6.5 -4.59773 | overlap 48685 ATCCGCCATAGTGTC GCGATAC TCG GTTTCGC TTTTTGCAACTCAGC Neut_0049 51375 - 49039 - | heavy metal translocating P-type ATPase TERM 44 49157 - 49141 - G 75 -8.7 -3.92143 | overlap 49133 49154 CAAAAGCCCCATAAA CGGGTAC AGC ATACCCG CCGCCAGCGGCACGC TERM 45 49173 - 49204 + g 74 -3.6 -4.99568 | overlap 49168 49194 CCGCCAGCGGCACGC CCAGCGCGTTGTAT ATGA ATGCAAAGCCCAGG TTTTGTTTCATATTG TERM 46 51401 - 51387 - R 74 -4.2 -4.93296 | TCATGACTATAAAAA CCTTTC CAG GAGAGG ATTACCAGAGGACAG Neut_0050 51895 - 51479 - | hypothetical protein Neut_0051 52436 - 51957 - | hypothetical protein Neut_0052 54751 - 52487 - | hypothetical protein Neut_0053 55288 - 54800 - | hypothetical protein Neut_0054 56182 - 55436 - | cytochrome c biogenesis protein, transmembrane region TERM 47 56878 - 56888 + r 71 -8.2 -3.78934 | overlap 56870 CAGTTCTTGGCGGTC GCCG TTT CGGC TTGTTCTCGGCGAGC Neut_0056 57719 - 56862 - | tetratricopeptide domain-containing protein TERM 48 57200 - 57190 - G 82 -6.8 -4.82901 | opp_overlap 57189 57165 57190 GCCGCTTTAGAAAAA GCTG CGG CAGC ATCTTCATACTTTTC TERM 49 57451 - 57478 + g 72 -9.9 -3.39895 | gap 2, overlap 57447 57477 TGCTTGCTGCTCTGG CGCCGTAGCCCAG TACT CTGGGC--CGGCG TTGCTTCATCGAGCA Neut_0057 58171 - 57722 - | cytochrome C biogenesis protein Neut_0058 58692 - 58168 - | periplasmic protein thiol--disulphide oxidoreductase DsbE TERM 50 58614 - 58598 - G 79 -6.5 -4.63218 | overlap 58599 GGCTTGTTAATAAAA GGCGAAG GGA CTTCGCT GGGCTTGAGGGTCAA TERM 51 58613 - 58599 - G 72 -10 -3.3761 | overlap 58598 GCTTGTTAATAAAAG GCGAAG GGA CTTCGC TGGGCTTGAGGGTCA Neut_0059 60650 - 58689 - | cytochrome c-type biogenesis protein CcmF TERM 52 60526 - 60513 - G 72 -3.7 -4.81843 | overlap 60514 AATAATTAAAAGAAA CTGCG CGCG CGCGG CGGGTCGAGCAAAGG Neut_0060 61102 - 60656 - | CcmE/CycJ protein TERM 53 61163 - 61151 - R 82 -10.5 -3.86897 | TTTACTTGCGATAAA GCCGC TTG GCGGC GCTGGCGCAGCAGGA Neut_0061 62015 - 61278 - | heme exporter protein CcmC Neut_0062 62710 - 62027 - | heme exporter protein CcmB TERM 54 62098 - 62079 - G 80 -2.1 -5.41143 | overlap 62090 62092 CACGGTGCAAAAAAA GCCGT TAAAACCAGC ACGGC GCCGAGCAACGACAG TERM 55 62228 - 62200 - G 79 -11 -3.52941 | overlap 62212 62213 AAAGCGGAAGTACAA GCAAGGCGACAA GGACG CTGCCGCCTCGC AGGCCCAGGGTCAAA Neut_0063 63321 - 62707 - | cytochrome c biogenesis protein CcmA Neut_0064 63884 - 63528 - | hypothetical protein TERM 56 63844 - 63824 - G 91 -14.7 -3.42241 | AATACACACTCACAA CGCCCCAGG AGG CCTGGAGCG GCAGCATGACCAGCA Neut_0065 64845 - 63958 - | methyltransferase type 11 TERM 57 64838 - 64812 - G 86 -8.1 -4.59853 | gap 1 CCAATCTCGCAAAAA GCCCGAATTTAG TTTG CCAAAT-CGGGC TTGCCATTGAGTAGC Neut_0066 65938 - 64889 - | YVTN beta-propeller repeat-containing protein TERM 58 68294 - 68274 - g 76 -6.7 -4.49958 | ATCCGATTAAAGAAA CGACGCCGG ATG CCATCGCCG CGTTGCACAACCTTG Neut_0067 66341 - 68854 + | heavy metal translocating P-type ATPase Neut_0068 68919 - 69281 + | transcriptional regulator, MerR family protein TERM 59 69266 - 69305 + T 81 -12.3 -2.60075 | opp_overlap 69261 69270 69272, overlap 69265 69268 CGAGAACACAGCCGA TAGACAGCAATTGTAGC TAGCCC GCTGCGATTGCTGGCTA GTTCGTTGCGGCCCA TERM 60 69268 - 69303 + T 72 -10.5 -2.84098 | opp_overlap 69261 69270 69272, overlap 69266 69265 AGAACACAGCCGATA GACAGCAATTGTAGC TAGCCC GCTGCGATTGCTGGC TAGTTCGTTGCGGCC Neut_0069 71193 - 69328 - | relaxase TERM 61 70267 - 70290 + g 72 -8 -3.85817 | GATACCGTCGATCCC CTGCGAGAGC AGGT GCGCACGCAG TTTATCCGAGACGGT TERM 62 70801 - 70828 + g 71 -11.2 -2.74371 | overlap 70807 GGCATAGGCCGTGGC GGCTGTCCAGGC TTCT GCCTGAGCGGCC TGGTCTTCGGGGGTT TERM 63 70974 - 70960 - G 74 -10 -3.55444 | TTCCGAGGCGGGAAA GAGCTG CAC CAGCTC GGCATAGCGTTCCAA TERM 64 71111 - 71086 - G 82 -11.8 -3.61398 | opp_overlap 71101 71102 CGGGGTCGCCAACAA CGAAGCGGCC GATTCT GGCCGCATCG GCCCTTTCGGTGGTG Neut_0070 71463 - 71696 + | transcriptional regulator/antitoxin, MazE Neut_0071 71683 - 72099 + | PilT domain-containing protein Neut_0072 72122 - 72487 + | hypothetical protein Neut_0073 73989 - 72484 - | hypothetical protein TERM 65 72963 - 72947 - G 73 -2.9 -5.00884 | overlap 72948 ATGGCCGGGAAAAAA CCGATCG AGC CAATCGT GATGCCGAGGTCACT Neut_0074 74349 - 74005 - | hypothetical protein Neut_0075 75743 - 74346 - | hypothetical protein TERM 66 74393 - 74438 + g 84 -14.8 -2.85668 | opp_overlap 74419 74422 ATTGTTGCAGGCGGT CGGGC-ACTGGGTCGCCCTGGT AGAT ACCACG-CGACCCAGCCGCCCG TGTGCTGTGGCGCTG TERM 67 74616 - 74633 + g 86 -9.1 -4.56597 | opp_overlap 74613 GCCGGTCAACAAGGT GCGTTGC AGCA GCAGCGC TTTTTCCAGCACGGA Neut_0076 76694 - 75762 - | hypothetical protein Neut_0077 77122 - 76691 - | hypothetical protein TERM 68 77276 - 77256 - R 76 -10.4 -3.28416 | GACTACGCAGAGTAA GCGGGAGC ACTAG GCTCCCAC TAGGATTATAAAGTT Neut_0078 77851 - 77282 - | hypothetical protein TERM 69 77383 - 77369 - G 74 -10 -3.54129 | opp_overlap 77380, overlap 77358 GACACGGGCGCGAAA GCGCAA GCC TTGCGC GGTGGAGAAATTGTC Neut_0079 78482 - 77979 - | DNA repair protein RadC TERM 70 78511 - 78489 - R 72 -5.6 -4.46073 | overlap 78506 GGGGAACATAACAAA CCTCCAAT AGATAAG ATCGGAGG ACGTGTACCCGAGAG Neut_0080 79432 - 78680 - | hypothetical protein Neut_0081 80566 - 79907 - | DSBA oxidoreductase Neut_0082 81012 - 80563 - | disulphide bond formation protein DsbB TERM 71 80822 - 80788 - G 70 -10.7 -3.01001 | opp_overlap 80792, overlap 80771 80786 80783 CAGCGGCAAAGCATA GCGCCAGCTACCGTA GTCTG TTCGGTAGCTGGCAA GGCCAAGTACCCAGA TERM 72 80988 - 80952 - G 74 -11.7 -2.81464 | gap 3, opp_overlap 80950 80952 80985 CTATTACCCATGACA GCGTCAGCCAGGCCC-AC GCGC GTCGGGCCTGGC-G-CGC GGCTTGTATCGAGGC Neut_0083 81552 - 81058 - | hypothetical protein Neut_0084 83741 - 81615 - | heavy metal translocating P-type ATPase TERM 73 81881 - 81927 + g 74 -11.7 -2.78725 | gap 2, opp_overlap 81845, overlap 81878 GCGCAACGTCCGTTC CGCCTCC-CA-TGGCTACGCC AACTGAA GCCGTAGCCAGTGCGGGGGCG TCGTTGATCCCGTCT TERM 74 82073 - 82087 + g 83 -10 -4.26344 | TGCGGCGATTGTCAC CCGTCA GCA TGACGG TTTTGATACCCATAT TERM 75 83800 - 83782 - H 86 -11 -3.99324 | overlap 83798 TGGCAGTATGATAAA CCCCGTAG TAA CTACAGGG TCAACCTATGAACCA Neut_0085 83808 - 84227 + | transcriptional regulator, MerR family protein Neut_0086 87430 - 84539 - | hypothetical protein TERM 76 87254 - 87236 - G 82 -10.2 -3.88291 | opp_overlap 87248, overlap 87239 CAGCAGTTCGACAAA GGACGGCG CCA CGCCGTAC AACGCCTCTTCGTTC TERM 77 87251 - 87239 - G 70 -10.5 -3.01422 | opp_overlap 87248, overlap 87236 CAGTTCGACAAAGGA CGGCG CCA CGCCG TACAACGCCTCTTCG Neut_0087 87864 - 87430 - | putative secreted protein Neut_0088 89242 - 87845 - | putative secreted protein TERM 78 88608 - 88635 + g 95 -14.8 -3.68557 | overlap 88599 CCGGCAGCCTTGGCA CCGGCGTCGGCC ACGC GGCCGACGGTGG TTTCCAGTGTCTTTT Neut_0089 90134 - 89232 - | putative secreted protein Neut_0090 90811 - 90131 - | putative secreted protein Neut_0091 91206 - 90808 - | hypothetical protein Neut_0092 91577 - 91218 - | hypothetical protein Neut_0093 91825 - 91592 - | hypothetical protein TERM 79 91766 - 91748 - G 71 -6.6 -4.19624 | CACTGCGAACACAAA GCCGACCA AGA CGGTCGCC ATGATGGCTGGCGTA Neut_0094 92193 - 91822 - | hypothetical protein Neut_0095 92367 - 92621 + | hypothetical protein Neut_0096 92749 - 93477 + | hypothetical protein Neut_0097 94279 - 93530 - | hypothetical protein Neut_0098 96450 - 94276 - | hypothetical protein TERM 80 95601 - 95644 + g 81 -13.1 -3.28791 | opp_overlap 95623, overlap 95602 95639 AGAGCTGGCCCGCAA TGCGGGTGGCCACTTCGGA AATCCG TCCGAATCGGCCAACCGCG TTGTAACGCGCGGAT TERM 81 95602 - 95643 + g 81 -14.4 -2.57132 | opp_overlap 95623, overlap 95601 95639 GAGCTGGCCCGCAAT GCGGGTGGCCACTTCGGA AATCCG TCCGAATCGGCCAACCGC GTTGTAACGCGCGGA TERM 82 95964 - 95951 - G 74 -9.5 -3.55622 | overlap 95941 95952 TGCAACCGCGGCAAA CCGCC GACC GGCGG CAGTGGGCGCACTGG Neut_0099 96997 - 96455 - | hypothetical protein TERM 83 96735 - 96695 - G 91 -7.5 -5.1963 | overlap 96721 96733 96734 GCCAATTAAGAAAAA CGGCTGTAGGCCCGGTG CCTCAAT CACCCGACGCACAACCG CGCCCGGCGTGAGCT Neut_0100 97584 - 96994 - | lytic transglycosylase, catalytic TERM 84 97399 - 97412 + g 83 -9.5 -4.15044 | GATGATGCGGTTGTC GCGGC GGAT GCCGC TTTCTTGCAGGGCCA Neut_0101 98294 - 97566 - | hypothetical protein Neut_0102 98959 - 98309 - | hypothetical protein Neut_0103 99537 - 98956 - | hypothetical protein TERM 85 99351 - 99313 - G 95 -11 -4.57073 | gap 1, overlap 99315 GACGGTCTGCAAAAA TAGGTCGCGCT-GCGCC GCCGTT GGCGCAAGCTCGACCAA GGTGTAGCGACCATA TERM 86 99349 - 99315 - G 90 -13.6 -3.90048 | gap 1, overlap 99313 CGGTCTGCAAAAATA GGTCGCGCT-GCGCC GCCGTT GGCGCAAGCTCGACC AAGGTGTAGCGACCA TERM 87 99621 - 99631 + r 80 -6.8 -4.82901 | overlap 99617 99623 99624 TCAATGCGAACTGGC TGCG TGC CGCA TTTTTGTCAGCGGCA TERM 88 100109 - 100086 - R 100 -15.2 -4.55697 | overlap 100087 ATTCTCACAAAGAAA CCCGGCGCCC ATCA GGGCGCCGGT GTGAAAAAACAATCA TERM 89 100108 - 100087 - R 100 -18.7 -3.32695 | overlap 100086 TTCTCACAAAGAAAC CCGGCGCCC ATCA GGGCGCCGG TGTGAAAAAACAATC TERM 90 100144 - 100122 - R 71 -4.7 -4.61482 | overlap 100123 GGTGTGAAAAAACAA TCAGGCCGC GACAA GCTGCCTGG CCAATGCTACTTCGA Neut_0104 102398 - 100122 - | helicase domain-containing protein TERM 91 102456 - 102417 - R 100 -23 -4.83615 | gap 1 GATGCTCCATAAAAA TGGGGCATG-CACCTCCCC CAA GGGGCGGTGACATGCCCCA GGGGGATAAAAGTTA Neut_0105 102813 - 102502 - | hypothetical protein TERM 92 102875 - 102837 - R 81 -9.4 -4.13654 | overlap 102838 CTCCTAAATGAGAAA GCCGAAGCGATGGCACCC ATC GGGCGGCATGGCCCCGGT GGGTGGATGAAAGTG TERM 93 102874 - 102838 - R 86 -12.9 -3.0771 | overlap 102837 TCCTAAATGAGAAAG CCGAAGCGATGGCACCC ATC GGGCGGCATGGCCCCGG TGGGTGGATGAAAGT Neut_0106 104019 - 102910 - | hypothetical protein Neut_0107 104753 - 104094 - | hypothetical protein TERM 94 104806 - 104773 - R 100 -13.9 -4.63218 | gap 1 GTGTCCTCAAGAAAA GAGACAG-CACCGCCC CAA GGGCAGTGACTGCCCC GTATGGGATGAAAGA Neut_0108 105259 - 104918 - | hypothetical protein TERM 95 105295 - 105317 + r 82 -12.6 -2.89564 | opp_overlap 105282 105281 105291 105292 ATCGCCAGGAACCTC CCCATCGGGG TCG CCCCGGCGGG TGTGTGAAGTAGCCG Neut_0109 105711 - 105364 - | plasmid-related protein TERM 96 105453 - 105468 + g 71 -10.4 -3.10796 | TCCAGTCCTGGGTTT CCTGCC TCTG GGCAGG TGTTGCGTAGTCCCA TERM 97 105769 - 105734 - R 89 -10.4 -4.55697 | gap 1, opp_overlap 105747, overlap 105764 ACCTCCAGAAAGAAA CCAGAGCC-CTCCCCCC GGC GGGAGAAGTGACCCCGG CGGGTGGTTGAAGAA Neut_0110 106479 - 105808 - | hypothetical protein TERM 98 105896 - 105869 - G 76 -11.2 -3.3334 | AAGTCCAGTGCATAA CCCAGCTCGCCC AGGC GGGCGATCTGCG CGCGTAGGGTGCGGC TERM 99 106027 - 105970 - G 90 -13.3 -3.68936 | gap 1, overlap 105962 105961 CAGCAATCCGAACAA GGCCGCATCGTC-GCTGTCCGGGCCGCC AGA GGCGGCGACGACAACCGACGGTGCATCC ATACCAAAAGGTGTG TERM 100 106539 - 106509 - R 100 -13.3 -3.61764 | overlap 106501 106510 TGATGAATGTGCAAA TGCCCACAACCAC ACGGG GTGGTTGCGGGCC ATAGGGGAAGAAAGA TERM 101 106538 - 106510 - R 100 -16.8 -2.76737 | overlap 106501 106509 GATGAATGTGCAAAT GCCCACAACCAC ACGGG GTGGTTGCGGGC CATAGGGGAAGAAAG Neut_0111 107501 - 106587 - | hypothetical protein TERM 102 107848 - 107821 - R 82 -9.2 -4.29227 | gap 1, overlap 107824 GGAATCACCAAGAAA CAAGCCCCCGA TGGTTGG TCGGGGGC-TG AGATAGGCACAGGTT TERM 103 107846 - 107824 - R 95 -12 -4.25016 | overlap 107821 ATCACCAAGAAACAA GCCCCCGA TGGTTGG TCGGGGGC TGAGATAGGCACAGG Neut_0112 108681 - 107866 - | hypothetical protein TERM 104 108735 - 108702 - R 79 -11.7 -2.52742 | opp_overlap 108706, overlap 108701 108699 108706 AGTCTCCGATAATAC GGAACCCCTCACCCC CATA GGGATGAATGGTCCC TTGGGGTTGGAATGG TERM 105 108957 - 108941 - R 100 -9.4 -6.02914 | TGCAGACAAAAAAAA GCCCCT GGGTA AGGGGC GAATGAGAAAATCTA Neut_0113 109686 - 108970 - | hypothetical protein TERM 106 109602 - 109582 - G 74 -11.1 -3.05384 | CTGGCTGGCATGTAA TGGCCGCCA GAT TGGCGGGCA ATCATCCTCGTAGGT TERM 107 109740 - 109715 - R 72 -9.7 -3.14026 | overlap 109704 CAGAGGGATAGCCAA GGCCAATCCCC TGCC GGGGATTGAAC CCCGGTGGGTGGAAA Neut_0114 110450 - 109887 - | hypothetical protein Neut_0115 112188 - 110695 - | DNA-cytosine methyltransferase TERM 108 112288 - 112265 - R 100 -14.6 -4.11585 | AGGCAGGAGAAAGAA GCCGAAGACC CTTA GGCCTTCGGC GCGGGAGGAAGTCAC TERM 109 112526 - 112477 - R 89 -12.1 -3.60792 | gap 1 CCGTCAACCCCGAAA GGTCTCCTGGTGCCTCGCACGACG ACG CGGCG-GCAAAATACCAGGGGACC CATCGCAGACGACGG TERM 110 112718 - 112689 - R 93 -13.7 -3.16564 | gap 1 GGGCTACGGGACGAA TGCCATGCA-ACCG AGT CGGTCTGCACGGCA CTGAGGGGTTTGGAG Neut_0116 114753 - 112738 - | DNA topoisomerase III TERM 111 115025 - 114998 - R 100 -12.8 -5.44721 | ACGACGTTAAAAAAA GAGCAGCGACAT CAGC ATGCCACTGCTC CACACAAAGGAAGTT Neut_0117 115440 - 115039 - | single-strand DNA-binding protein Neut_0118 116025 - 115498 - | hypothetical protein TERM 112 115948 - 115932 - G 71 -6.5 -4.14013 | TAAAAGGTTTTAAAA GGCCTTT TAG ATAGGCC GCGTGTTCCAACCGC Neut_0119 116822 - 116022 - | hypothetical protein Neut_0120 118227 - 117052 - | hypothetical protein TERM 113 117449 - 117478 + g 70 -9.3 -3.54935 | gap 1 ACCTCACGTACTGTA CGGTCCTGCTTCGG ATT CCGAAG-AGTGCCG TTTAACGCCGGTTTC TERM 114 118072 - 118096 + g 77 -10.7 -3.63627 | opp_overlap 118072, overlap 118073 TCTGTCGAGGAAAAG TCGGCGCGGAA CGC TTTCGTGCCGG TTTCCGCTATAAAGA TERM 115 118073 - 118095 + g 74 -12 -2.77962 | opp_overlap 118072, overlap 118072 CTGTCGAGGAAAAGT CGGCGCGGAA CGC TTTCGTGCCG GTTTCCGCTATAAAG TERM 116 118129 - 118114 - G 73 -6 -4.55295 | opp_overlap 118114 TCCGCTATAAAGAAA CCCGTC GCTC GCCGGG TTCTGTTCCTGCTCG Neut_0121 118791 - 118231 - | hypothetical protein Neut_0122 120450 - 118807 - | hypothetical protein TERM 117 120467 - 120479 + r 70 -5.5 -4.39166 | overlap 120463 120468 TCAGCCATGGCCTGT TCCTC GAA GAGGG TTTTCATGTATCGGG Neut_0123 120712 - 120452 - | hypothetical protein Neut_0124 121565 - 120705 - | cobyrinic acid a,c-diamide synthase TERM 118 121506 - 121535 + g 85 -12.1 -3.73953 | gap 1, opp_overlap 121494 CAATCCGCCCAGGTT GGCGGCGGTGGTCG TCT TGCCCACC-CCGCC TTTGGTAGAAATGAT Neut_0125 121818 - 121606 - | phage transcriptional regulator, AlpA Neut_0126 122685 - 121936 - | hypothetical protein TERM 119 122374 - 122356 - G 79 -6.6 -4.68908 | overlap 122357 GCGACTGAAAAGAAA CCCAGGGC GAT GCGCTGGA TAATGGGTGCGCATC Neut_0127 123841 - 124164 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Neut_0128 124236 - 124598 + | hypothetical protein Neut_0129 128082 - 124618 - | transcription-repair coupling factor Neut_0130 129389 - 128109 - | MgtC/SapB transporter Neut_0131 131151 - 129382 - | single-stranded-DNA-specific exonuclease RecJ TERM 120 130053 - 130066 + g 70 -8.1 -3.67597 | opp_overlap 130053 AACACAGGCTGTAAA CAGGG TGCA CCCTG TTATTGGCTGGCGCA TERM 121 130407 - 130358 - G 70 -9.9 -3.18434 | opp_overlap 130372 130380 130387, overlap 130356 130361 AACAACGCATGAATA CCAGCACAGCAATGGCCGCTGCG GATT CGCTGCAATCCTTGCTGTACCAG GATGCGGTTGGTTCC Neut_0132 131933 - 131337 - | cytochrome P460 precursor Neut_0133 132941 - 132021 - | indole-3-glycerol-phosphate synthase Neut_0134 133977 - 132952 - | anthranilate phosphoribosyltransferase Neut_0135 134576 - 133974 - | anthranilate synthase component II TERM 122 134345 - 134359 + g 70 -4.2 -4.62069 | opp_overlap 134339 134345, overlap 134346 GATGACCAAGACACA CTCCCA ATA TGGGAA TTTTTCCACTAAACC Neut_0136 134703 - 136202 + | periplasmic sensor signal transduction histidine kinase TERM 123 136338 - 136308 - g 80 -10.4 -3.76775 | opp_overlap 136317 CCGAACATATGGAAA CCCGGATTATCCAG GAA CCGGATGATCTGGG TGAGCTAATGCGTTA Neut_0137 136199 - 136738 + | hypothetical protein Neut_0138 136755 - 138122 + | two component, sigma54 specific, transcriptional regulator, Fis family protein Neut_0139 139477 - 138131 - | PDZ/DHR/GLGF domain-containing protein TERM 124 138313 - 138325 + g 70 -4.7 -4.6902 | GTAATCCGGCAGATT CGGCG ATA CTCCG TTTTTCGACTTGTAG Neut_0140 143357 - 139455 - | phosphoribosylformylglycinamidine synthase TERM 125 139773 - 139733 - G 77 -11.8 -3.03441 | CATTATCGCGGAATA CCGCCAACCCTTCACCAT GCGCA ACGGTGATGGGCAAGCGG CTACCTGCCATGCCG TERM 126 143340 - 143330 - G 76 -8.2 -4.22407 | GACGAAAAGGAGAAA GCGC ATT GCGC CCGTGAAATTGCAAC Neut_0141 143602 - 145170 + | hypothetical protein Neut_0142 145197 - 145409 + | hypothetical protein Neut_0143 146013 - 145894 - | helix-turn-helix protein, CopG family protein Neut_0144 146297 - 146731 + | glutathione-dependent formaldehyde-activating, GFA Neut_0145 146762 - 148321 + | carbohydrate kinase, YjeF related protein Neut_0146 148745 - 149563 + | ABC-2 type transporter Neut_0147 149673 - 149915 + | hypothetical protein Neut_0148 150090 - 150644 + | hypothetical protein Neut_0149 151086 - 152135 + | putative transposase Neut_0150 152916 - 152611 - | putative plasmid maintenance system antidote protein, XRE family protein Neut_0151 153213 - 152926 - | plasmid maintenance system killer TERM 127 154382 - 154364 - g 70 -4.6 -4.6955 | TACGAACACAGAAAA TCATTTAG TTT CCAAACGA CATTTTGCAGAAGGT Neut_0152 153294 - 154607 + | ABC transporter-related protein TERM 128 156099 - 156111 + G 73 -3.3 -5.01845 | opp_overlap 156099 AGTTCGGCCACATTA TCCGG ATT CCAGA TTTTTCGTTGTTCTG TERM 129 156687 - 156729 + G 79 -12.1 -3.28188 | gap 1, overlap 156691 TCAACGCAAGATCTC ACG-GGAGGCTGATCGTTGG TTTG CCAATGGTCAGCCTCTTCGA TTCGTGCATTTTAGT TERM 130 156691 - 156724 + G 100 -18.3 -3.21466 | overlap 156687 CGCAAGATCTCACGG GAGGCTGATCGTTGG TTTG CCAATGGTCAGCCTC TTCGATTCGTGCATT Neut_0153 154618 - 158178 + | hypothetical protein Neut_0154 158185 - 159237 + | methyltransferase type 11 TERM 131 159291 - 159317 + G 72 -8.6 -3.92542 | opp_overlap 159301 ACCTTGTTTATAGTG GGCGCCAGAAGC TAC GTTGGTGGCGCC TTGTTTGCGAGTGCA TERM 132 160070 - 160096 + G 73 -12.2 -2.56046 | opp_overlap 160062, overlap 160069 CAGACTACTCGGACG GCCGCCGCACAG CCT CTGTGAGGCAGC TCAATTAGAGTTTGC Neut_0155 159261 - 160127 + | NAD-dependent epimerase/dehydratase Neut_0156 160144 - 161175 + | NAD-dependent epimerase/dehydratase TERM 133 162039 - 162025 - g 71 -5.7 -4.39696 | opp_overlap 162025 162024 TGGGAAAGTAAGAAA CGTTC AGCCA GAACG GTTTCCAGTCCTCAT Neut_0157 161224 - 162255 + | GHMP kinase TERM 134 162602 - 162585 - g 73 -5.5 -4.59773 | opp_overlap 162585 GCGCATGCGCAAAAA GGCGATG TATT CATTGCC TACTCTACTTCGGGC Neut_0158 162252 - 162836 + | phosphoheptose isomerase TERM 135 162824 - 162844 + F 70 -9.7 -2.88945 | opp_overlap 162842, overlap 162823 162834 GCGTACGCTGTTCAA GGCTCCCAT TTG ATGGAAGCC ATTATTCTGGCTGGG Neut_0159 162836 - 163522 + | nucleotidyl transferase Neut_0160 163526 - 164083 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 136 164584 - 164603 + G 90 -9.4 -4.65895 | GAATGCTGCCATCCA TTCCAGAT CAAT ATCTGGAA TTTTTACCTGCGGAC TERM 137 164783 - 164769 - g 73 -2.8 -5.00846 | opp_overlap 164780 164780, overlap 164780 GAAATACGACAAAAA CAGG AAATCAA CCTG GTGGCCTGGGTTTGA Neut_0161 164132 - 165004 + | ATP-binding region, ATPase-like Neut_0162 165022 - 165381 + | hypothetical protein Neut_0163 165383 - 165922 + | PilT domain-containing protein Neut_0164 167645 - 165948 - | sulfate adenylyltransferase/adenylyl-sulfate kinase TERM 138 166305 - 166325 + g 73 -6.1 -4.50627 | GTTTTCTACCCGGTC GGCATTGGT AAA ACCAAGGTC TTTGTTTAATCCGTG TERM 139 166619 - 166603 - G 90 -8.7 -4.70583 | opp_overlap 166603 TCCACCAACACAAAA TTGCCCA GTA CGGGCAA TGTGGTATAGGTATC Neut_0165 167783 - 168601 + | 3'(2'),5'-bisphosphate nucleotidase TERM 140 169448 - 169476 + G 70 -11.1 -2.51471 | overlap 169447 TATGATGAATTTTCC CGTTTCCGTAATG CTT CATTATGGAACCG ATTGGTGGGCTTGTA Neut_0166 168623 - 169567 + | glycosyl transferase family protein Neut_0167 170250 - 169933 - | plasmid maintenance system antidote protein, XRE family protein TERM 141 170217 - 170234 + g 77 -9.8 -3.76065 | CATCTGCCAGCATCT CGCCGG GGGAAA CCGGCG TTAATTTATTATTCA Neut_0168 170586 - 170263 - | plasmid maintenance system killer Neut_0169 170725 - 171141 + | hypothetical protein Neut_0170 171395 - 171156 - | transposase TERM 142 172164 - 172179 + H 73 -2.5 -5.055 | GGCTTATATCGGCAC CCGGA AAAGAG TTCGG TTTTTTACGCGTTAA TERM 143 172606 - 172595 - g 72 -3.6 -4.81083 | overlap 172596 GCTAACTATCAAAAA GCGC GCCA ACGC TTGGTGAGTGCGGTG TERM 144 172773 - 172793 + G 76 -11.1 -3.28924 | CACGCGATGCTATAC GCCAGGCTT TTA AAGCCGGGC TTATCACCGACGGTG Neut_0172 172544 - 172957 + | nucleotidyltransferase substrate binding protein Neut_0173 172959 - 173324 + | DNA polymerase beta subunit TERM 145 173406 - 173372 - f 100 -12.5 -4.2349 | opp_overlap 173378 173379 TCGTGAGATTGAAAA TATGAAATCCTTTTA TCCTT TAAAAGGACTTCATA TAACACAATCACATC Neut_0174 173373 - 173642 + | putative transposase Neut_0176 174361 - 174098 - | hypothetical protein Neut_0177 175370 - 174339 - | putative transposase Neut_0178 175683 - 175348 - | hypothetical protein Neut_0179 175920 - 176642 + | glycosyl transferase family protein TERM 146 176697 - 176713 + T 78 -6.5 -4.59853 | overlap 176698 176712 CATGGCAAGATCATC CCTGGTG CTC CACCAGC TTTTTCAAGCCTTCG TERM 147 176698 - 176712 + T 76 -10 -3.3543 | overlap 176697 ATGGCAAGATCATCC CTGGTG CTC CACCAG CTTTTTCAAGCCTTC Neut_0180 177708 - 176692 - | NAD-dependent epimerase/dehydratase TERM 148 176752 - 176768 + g 71 -5.7 -4.33274 | opp_overlap 176741 TAACGGCGGCTGCCA CCCGAGC AAG GTGCGGG TTTTACTGATATCCA TERM 149 177095 - 177071 - G 79 -8.5 -4.35518 | overlap 177058 AACGGCAGAGGAAAA CCACGCCGCAC CCA ACGCAGCATGG TCAGAAAATTACCTT TERM 150 177356 - 177314 - G 82 -6.9 -4.84918 | gap 2 CTGATAAACACAAAA CGCCGCATTCCGGCAGCGGCA GCC TGCTGC-GCCAGG-CGCAGCG TACCATCTACGTTCA Neut_0181 181374 - 177979 - | adenylate/guanylate cyclase Neut_0182 183757 - 181673 - | hypothetical protein TERM 151 183575 - 183589 + g 72 -10 -3.48276 | CGCAGCGCGCGTTTG TTCGGC TTC GCCGAA TTCTGTGGCGGACGG TERM 152 183678 - 183662 - G 70 -8.7 -3.53444 | overlap 183666 GTAGCGGTCGGCAAA TCCAGCG GCC CACTGGA CAGCTCGGTCGGCGG Neut_0183 183991 - 184728 + | hypothetical protein TERM 153 184990 - 185028 + G 72 -9.5 -3.3782 | gap 1 TGCCATGGCTGTTTT CGGCTCCG-GCTACGGCT GGGA AGCGCTTGCTCGGAGCCG TTGGTTGGATCGCTG Neut_0184 184901 - 185335 + | hypothetical protein Neut_0185 185388 - 185948 + | sugar transferase TERM 154 186431 - 186446 + G 70 -4.6 -4.61852 | overlap 186433 TATTTTGAGACATAT TTCCCG GCCC CGGGCA TTTATTTATGGTGTT Neut_0186 185958 - 187940 + | polysaccharide biosynthesis protein CapD Neut_0187 188546 - 187959 - | CMP/dCMP deaminase, zinc-binding Neut_0188 188750 - 189610 + | flagellar motor protein MotA TERM 155 189760 - 189772 + GF 100 -5.5 -5.88471 | TGCTGATTTCGTGAC GGCTA TGA TGGCC TTTTTTTTGCTGATG motB 189653 - 190597 + | flagellar motor protein MotB TERM 156 190651 - 190665 + G 73 -6.4 -4.5464 | overlap 190653 190657 190660 AAAAGATCTTTGTAG TGCTGC CAG GCAGTA TTTTGCTTGTATGTC TERM 157 190772 - 190794 + G 78 -9.8 -3.82807 | overlap 190773 GAGTTTCTATCTGTT GCGCTTGCCA GTC TGGCAGGCGG TTATTCATCTGTTCT TERM 158 190773 - 190793 + G 80 -13.3 -2.886 | overlap 190772 AGTTTCTATCTGTTG CGCTTGCCA GTC TGGCAGGCG GTTATTCATCTGTTC TERM 159 190913 - 190928 + G 74 -4 -4.96848 | gap 1, opp_overlap 190913 190915 TGGAAGAATACATCA CACACGG GTG CCGT-TG TTTTTGTCTAGCCGG Neut_0190 190572 - 191369 + | hypothetical protein Neut_0191 192785 - 191382 - | cysteinyl-tRNA synthetase TERM 160 191928 - 191917 - G 78 -2.2 -5.32944 | overlap 191921 CGCACAATGAAAAAA CGAA CTAC CTCG GGCTGGTAGCGTGCC Neut_0192 192907 - 193548 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type Neut_0193 193567 - 194058 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 161 194455 - 194473 + G 71 -7.4 -4.11371 | opp_overlap 194455 CTGACCAGGCAGCAA CCCTTCTG AGC CAGAATGG TTTTACGGAGTGTTA Neut_0194 194136 - 194588 + | rhodanese domain-containing protein Neut_0195 195424 - 194603 - | putative undecaprenol kinase Neut_0196 197370 - 195472 - | thiamine biosynthesis protein ThiC TERM 162 197429 - 197389 - H 82 -10.4 -4.15222 | gap 1, opp_overlap 197399 197417 197423 ATGCTCCTTAAGAAA GCCGCAAGG-AGCAGGGAA ATTA CTCCCAGCTTCCCTCCGGC GGCGTTATCCGCATC Neut_0197 197576 - 198232 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 163 198617 - 198601 - g 72 -3.6 -4.84527 | CCGAGAGATCAAAAA TCGGGG AATTA CCGCGA CTCTGACTCAACCGC Neut_0198 198335 - 199657 + | type I secretion outer membrane protein, TolC family protein Neut_0199 202173 - 199720 - | putative ATP-dependent protease La, putative TERM 164 200607 - 200627 + g 79 -11.1 -3.53012 | CAATAGTATTTCCGC GCGCTTTGC ATT GCAGGGCGC TTTCCACAACCAGCA TERM 165 202658 - 202692 + r 89 -10.2 -4.56775 | opp_overlap 202663 TTTTTCGCCGGAGCA GTAAATTTCTCCTGTT ACA AAATGGAGAAATTTAC TTTTTAGCAGCAGCT Neut_0200 203933 - 202719 - | alanine--glyoxylate transaminase TERM 166 203807 - 203789 - G 71 -7.4 -4.08216 | TCATTTCGGTGAAAA CCGGATCA AGG TGACCCAG TGTCGGGCGAGCCAT TERM 167 204051 - 204016 - R 74 -10.6 -2.64144 | opp_overlap 204020, overlap 204020 TCTTCAGGGAAATAT CAAATAGCCTACTGGT GGAA ACCGATAGGCTATTTA CTTTGACTTCAGATT TERM 168 204047 - 204020 - R 80 -9.2 -4.01603 | opp_overlap 204020, overlap 204016 CAGGGAAATATCAAA TAGCCTACTGGT GGAA ACCGATAGGCTA TTTACTTTGACTTCA TERM 169 204020 - 204047 + r 80 -9.2 -4.10672 | opp_overlap 204020 204016 CAGGGAAATATCAAA TAGCCTACTGGT GGAA ACCGATAGGCTA TTTACTTTGACTTCA Neut_0201 206675 - 204252 - | ATP-dependent protease La TERM 170 204386 - 204401 + g 73 -3.2 -4.95618 | GGTCAATCCATTTTA CTGGCT TGAT ATCCAG TTTGTTTTTAATGTT TERM 171 205873 - 205887 + g 76 -2.8 -5.12987 | overlap 205864 GCTAATGCTTCTTTA GGCA AGGAAGC TGCC TTTATTTTTCTTTCA TERM 172 206778 - 206759 - R 72 -5.8 -4.57569 | opp_overlap 206759 GCAGTGTGCTAAAAA CAAACTCT TAAA AGAATTTG TACTATTTCGAGCTT clpX 208064 - 206781 - | ATP-dependent protease ATP-binding subunit TERM 173 208094 - 208116 + r 82 -9.2 -4.24384 | opp_overlap 208094 208092 ATCATCAAACGAATA TTGCTCTTGT TCA GCAGGAGCAA TTTGATTTTACTCGT Neut_0203 208768 - 208124 - | ATP-dependent Clp protease, proteolytic subunit ClpP tig 210068 - 208752 - | trigger factor TERM 174 209393 - 209419 + g 76 -12.5 -2.63112 | TCTTTCCGGCAACTT CTTTTCCTGAA TAGTC TTCAGGAAAAG TCATATCAAACGTTT Neut_0205 211199 - 210402 - | short-chain dehydrogenase/reductase SDR TERM 175 211231 - 211194 - G 76 -5.6 -4.79756 | gap 1, opp_overlap 211194 GATAGAAGTTAAAAA CCACAAC-GTCCGGTTT TTTGC ATACCGATCCGTTGTGG TTCATTATTGTTAAC groEL 212911 - 211268 - | chaperonin GroEL TERM 176 211906 - 211925 + g 79 -8.6 -4.41047 | CTTTGGTATCTCCGG CACCATCA ATAA TGGTGGTG TTTTCCTTGCCAACT groES 213241 - 212951 - | co-chaperonin GroES TERM 177 213335 - 213386 + H 83 -11.2 -3.32294 | gap 1, opp_overlap 213341 213342, overlap 213339 213340 213369 AATCGCTGAATCTCG TAACAACCTATTATTAGCACTCAAC GAC GTTGAGTGCTAATAATAGAG-GCTA TTATAAGGAATTTCA TERM 178 213339 - 213384 + H 91 -12.9 -3.22668 | gap 1, opp_overlap 213341 213342, overlap 213335 213340 213369 GCTGAATCTCGTAAC AAC-CTATTATTAGCACTCAAC GAC GTTGAGTGCTAATAATAGAGGC TATTATAAGGAATTT TERM 179 213340 - 213383 + H 100 -16.4 -2.53119 | gap 1, opp_overlap 213341 213342, overlap 213339 213335 213369 CTGAATCTCGTAACA AC-CTATTATTAGCACTCAAC GAC GTTGAGTGCTAATAATAGAGG CTATTATAAGGAATT TERM 180 213381 - 213341 - H 100 -22.3 -3.63569 | opp_overlap 213340 213339 213335 213369, overlap 213342 TGAATCTCGTAACAA CCTATTATTAGCACTCAAC GAC GTTGAGTGCTAATAATAGA GGCTATTATAAGGAA TERM 181 213380 - 213342 - H 100 -23.6 -2.7782 | opp_overlap 213340 213339 213335 213369, overlap 213341 GAATCTCGTAACAAC CTATTATTAGCACTCAAC GAC GTTGAGTGCTAATAATAG AGGCTATTATAAGGA Neut_0208 213407 - 214717 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase Neut_0209 214724 - 216130 + | beta-lactamase domain-containing protein TERM 182 216124 - 216161 + T 82 -9.3 -4.16921 | opp_overlap 216122, overlap 216125 GGATTCAGAACGACT GGGCTGATTCTATTTTC AGCT GAAAGTAGAATCAGCAA TTTTCAAACTTCTTC TERM 183 216125 - 216160 + T 83 -12.8 -3.09429 | opp_overlap 216122, overlap 216124 GATTCAGAACGACTG GGCTGATTCTATTTTC AGCT GAAAGTAGAATCAGCA ATTTTCAAACTTCTT Neut_0210 216537 - 216229 - | cytochrome c, class I Neut_0211 216699 - 217463 + | exodeoxyribonuclease III Xth TERM 184 217844 - 217825 - g 76 -4.2 -4.91109 | gap 1 GCCCTAGCAGAAAAA CTGCTCGCC AGC GGCGT-CAG TGCAATTGCCTATGA Neut_0212 217510 - 218622 + | alanine dehydrogenase Neut_0213 219281 - 218760 - | CreA family protein Neut_0214 220588 - 219416 - | major facilitator transporter Neut_0215 221195 - 220617 - | hypothetical protein TERM 185 220892 - 220870 - G 84 -2.6 -5.60993 | TCGGCCAGAAAAAAA GTGACCAGAG TCG CTCCAAACAC GCTGAATCGTCTGGC Neut_0216 221879 - 221409 - | transposase, IS4 family protein TERM 186 223233 - 223283 + G 73 -3.3 -5.0133 | gap 1, overlap 223234 GAGTATGCTGGAAAC ACCAC-TCATCATTTCGCACATGG ATAA CTGTGTGCTGTATGGTGATGTGGC TTTTTTACCGAAATG Neut_0218 222829 - 223611 + | hypothetical protein TERM 187 227199 - 227216 + G 70 -9.1 -3.53224 | opp_overlap 227198, overlap 227197 GATGTGGAAAAACTG GCTAGGC TATT GCCTGGC TTTAAACAAGAGCTG Neut_0219 223617 - 227282 + | multi-sensor hybrid histidine kinase Neut_0220 227300 - 228493 + | succinyl-CoA synthetase, beta subunit Neut_0221 228497 - 229372 + | succinyl-CoA synthetase subunit alpha Neut_0222 229410 - 229730 + | hypothetical protein TERM 188 229872 - 229861 - g 100 -3.6 -5.86965 | opp_overlap 229868 AGGCACTAAAAAAAA CAGG CATT CCCG AAGCAGCTGTCGGGA TERM 189 229868 - 229887 + G 71 -7.2 -4.03234 | gap 1, opp_overlap 229861 AAAAAAAACAGGCAT TCCCGA-AG CAG CTGTCGGGA TTTATGTCAGGGAAG TERM 190 230833 - 230819 - g 73 -2.8 -5.03314 | opp_overlap 230806 230819, overlap 230821 GCTATTTTCAAAAAA TATGGA TTT TCCAGA ATTGGTGCTGGAAAA Neut_0223 229758 - 231185 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 191 233383 - 233367 - f 74 -10.9 -2.62396 | opp_overlap 233360, overlap 233369 CAGTTGGTTAGAGCA CACGCTT GAT AAGCGTG GGGTCGGTGGTTCAA TERM 192 233461 - 233445 - f 74 -10.9 -2.62616 | opp_overlap 233439 233435, overlap 233460 TCAGCTGGGAGAGCA CCTGCTT TGC AAGCAGG GGGTCATCGGTTCGA TERM 193 234133 - 234122 - f 74 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAATAGATCCT TERM 194 235078 - 235066 - f 71 -7.7 -3.71848 | TGCGGGGACGAAGAA GGCTA GCT TAGCC GGGTGTTGGATGTCC TERM 195 236713 - 236756 + F 85 -7.8 -4.63218 | opp_overlap 236720 236731 236734, overlap 236716 236754 CGCCAAGCTTCCTAT TTATAGAGTATTTTGAAAGA TTAT TTTTTTAAAATACTCTATTG TTTTGTTGAGGCAAA TERM 196 236716 - 236753 + F 95 -11.7 -4.43307 | opp_overlap 236720 236731 236734, overlap 236713 CAAGCTTCCTATTTA TAGAGTATTTTGAAAGA TTAT TTTTTTAAAATACTCTA TTGTTTTGTTGAGGC TERM 197 236754 - 236775 + F 77 -2.3 -5.46698 | overlap 236713 236756 TTTTAAAATACTCTA TTGTTTTGT TGAG GCAAAACTA TTTTTTAATTTTAGC TERM 198 236906 - 236947 + F 100 -11.9 -5.12474 | CCATTCCTATTTATT TCATTTATTGCAGCCATAT TTTT ATATGGCTATAATGAATGA TTTTTCTCTCTTCTC TERM 199 237764 - 237781 + F 70 -2.7 -4.92783 | overlap 237766 AAATTAGTAAGGTAT TGGGTTA CAGA TAACCTG TTTTTCTCATAAATT TERM 200 239623 - 239594 - g 73 -6.3 -4.56775 | AGCGCTTGGTAAAAA GGCCGCAATGGAA ATGC TACCCCTGCAGCC AGGTGACGTACCGGA Neut_0225 238746 - 239753 + | NAD-dependent epimerase/dehydratase Neut_0226 239762 - 241036 + | UDP-glucose/GDP-mannose dehydrogenase Neut_0227 241939 - 241043 - | hypothetical protein TERM 201 243011 - 243023 + G 76 -4.7 -5.04733 | overlap 243012 CTTGCCTGTTAGCAT GCCGG ATG CCGGG TTTTATTTATGGTTA Neut_0228 242034 - 243239 + | hypothetical protein dapD 243267 - 244088 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase Neut_0230 244277 - 244648 + | hypothetical protein TERM 202 244672 - 244711 + F 100 -13.1 -3.64703 | opp_overlap 244672 CAGAAAATTGAAAAA CTGATTGCTTCCTCTGA TGTATT TTAGAGGGAGTAATCAG TTTACATAAGAGGAG TERM 203 244711 - 244672 - f 81 -6.5 -4.89729 | opp_overlap 244672 CAGAAAATTGAAAAA CTGATTGCTTCCTCTGA TGTATT TTAGAGGGAGTAATCAG TTTACATAAGAGGAG Neut_0231 244735 - 245082 + | hypothetical protein TERM 204 245143 - 245178 + F 100 -19.4 -2.73771 | opp_overlap 245146 245154, overlap 245146 245154 CAGAGGCATGTCAAG TAATGAAAAAAGCGGA TTAC TCCGCTTTTTTCATTA TGGTATATCTGATCG TERM 205 245175 - 245146 - f 100 -16.7 -3.35992 | opp_overlap 245146 245143 245154, overlap 245154 AGGCATGTCAAGTAA TGAAAAAAGCGGA TTAC TCCGCTTTTTTCA TTATGGTATATCTGA TERM 206 245146 - 245175 + F 100 -16.7 -3.51235 | opp_overlap 245146 245154, overlap 245143 245154 AGGCATGTCAAGTAA TGAAAAAAGCGGA TTAC TCCGCTTTTTTCA TTATGGTATATCTGA TERM 207 245154 - 245167 + F 95 -8.1 -5.33848 | opp_overlap 245146 245154, overlap 245146 245143 CAAGTAATGAAAAAA GCGGA TTAC TCCGC TTTTTTCATTATGGT TERM 208 245167 - 245154 - f 95 -8.1 -5.32565 | opp_overlap 245154 245146 245143, overlap 245146 CAAGTAATGAAAAAA GCGGA TTAC TCCGC TTTTTTCATTATGGT Neut_0232 245269 - 246258 + | biotin--acetyl-CoA-carboxylase ligase Neut_0233 246286 - 247059 + | pantothenate kinase Neut_0234 247078 - 247749 + | GTPase EngB TERM 209 247756 - 247730 - f 100 -12.3 -6.23209 | opp_overlap 247753 GCAATCAAAAAAAAA CCCCGGCTAAA GGGGA TTAAGCCGGGG AGAATCGCCTTGCTT TERM 210 248709 - 248722 + G 70 -2.3 -4.99645 | opp_overlap 248709 248710, overlap 248710 AGAGTGAAGGACAAA CTGGG TGTA CCCAC TTTTGTTTATCAGGT Neut_0235 247893 - 248900 + | delta-aminolevulinic acid dehydratase TERM 211 249021 - 249008 - T 86 -3.1 -5.49569 | opp_overlap 249020, overlap 249015 CACGAACATAAAAAA CAGGA ATTT TCCTA ACCGAACCGACCGGT Neut_0236 249816 - 249019 - | phosphate ABC transporter, ATPase subunit Neut_0237 250752 - 249826 - | phosphate ABC transporter, inner membrane subunit PstA TERM 212 250416 - 250429 + g 74 -3.9 -5.02074 | opp_overlap 250416 CATTAATTTCGATAA TTTCA GTAA TGAAA TTTTTTGGCGCGTAC Neut_0238 251766 - 250831 - | phosphate ABC transporter, inner membrane subunit PstC TERM 213 251580 - 251570 - G 86 -6.8 -5.02074 | GTATCGGTCAAAAAA TCCC AGA GGGA AACATGCTCGAAAAA TERM 214 251674 - 251657 - G 100 -5.5 -6.18768 | AAAACAGAAAAAAAA GCTGCCA GAAA CAGCAGC AGCTCTATTATTCGC Neut_0239 251997 - 252248 + | hypothetical protein Neut_0240 253529 - 252381 - | cell division protein FtsZ Neut_0241 254837 - 253599 - | cell division protein FtsA Neut_0242 255627 - 254899 - | polypeptide-transport-associated domain-containing protein TERM 215 255533 - 255523 - G 91 -4.6 -5.63103 | CCGTAATGAAAAAAA CGGC AAT GCCA GCACCCTGATTCCTA Neut_0243 256603 - 255683 - | D-alanine--D-alanine ligase murB 257598 - 256600 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 216 256641 - 256661 + g 76 -5.3 -4.77165 | CGATAATGCGTACTT CCGTGACCA GCC TGATCTCGG TTTTCTTGTAAACGA TERM 217 257228 - 257209 - G 74 -8.6 -4.0075 | gap 1 ATGTAATGAAGCAAA CCTG-GCCA GCT TGGCGCAGG GTACCCCCGCTCCGG TERM 218 257435 - 257407 - G 70 -4.5 -4.6902 | opp_overlap 257409, overlap 257399 257409 257411 CCAGAAGTGTAAAAA TACAGCCAGATCT TCC AGATCTGCCGGTT GGTAAAAATAGGCAG murC 259029 - 257608 - | UDP-N-acetylmuramate--L-alanine ligase murG 260138 - 259026 - | N-acetylglucosaminyl transferase TERM 219 259676 - 259699 + g 79 -6.6 -4.62904 | opp_overlap 259677, overlap 259677 259691 259693 TGATGGTACCGGGAA ATGCCAGCAG GATA CGGCTGGCAA TTTTTGCCAGTATTT TERM 220 259698 - 259677 - G 74 -10.1 -3.57462 | opp_overlap 259676 259677 259691 259693 GATGGTACCGGGAAA TGCCAGCAG GATA CGGCTGGCA ATTTTTGCCAGTATT TERM 221 259677 - 259698 + g 72 -10.1 -3.36658 | opp_overlap 259677, overlap 259676 259691 259693 GATGGTACCGGGAAA TGCCAGCAG GATA CGGCTGGCA ATTTTTGCCAGTATT TERM 222 259691 - 259711 + g 78 -6.1 -4.80178 | opp_overlap 259677, overlap 259677 259676 259693 259706 ATGCCAGCAGGATAC GGCTGGCAA TTT TTGCCAGTA TTTTATTGGTTAGTC TERM 223 259693 - 259709 + g 84 -10.9 -4.00694 | opp_overlap 259677, overlap 259677 259676 259691 259706 GCCAGCAGGATACGG CTGGCAA TTT TTGCCAG TATTTTATTGGTTAG Neut_0247 261321 - 260161 - | cell division protein FtsW TERM 224 260994 - 260975 - G 73 -11.4 -2.8789 | opp_overlap 260975 260974 260971 260970, overlap 260970 TTAAATATCACCAGA GGCAGCCA GCGA CGGCTGCC ATTGATTTCAAGGCC Neut_0248 262738 - 261326 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase Neut_0249 263820 - 262735 - | phospho-N-acetylmuramoyl-pentapeptide-transferase Neut_0250 265265 - 263892 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase murE 266824 - 265262 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 225 265630 - 265643 + g 82 -3.8 -5.22312 | opp_overlap 265630, overlap 265625 265622 AACCGATCACGCAAA CCAG TTTTGC CTGG TTTTTTCGTATCCGT Neut_0252 268560 - 266821 - | peptidoglycan glycosyltransferase Neut_0253 268844 - 268557 - | cell division protein FtsL TERM 226 268860 - 268870 + r 80 -6.8 -4.82901 | CTGCTTATCGCGTTT CTGG TTT CCAG TTTTTCTGCCACCCG Neut_0254 269794 - 268841 - | S-adenosyl-methyltransferase MraW TERM 227 269707 - 269692 - G 76 -11.8 -2.88822 | opp_overlap 269697 269700, overlap 269689 GTCGCGACAGAATCA GGCGGC TGTG GCCGCC CCGGCCATACGTTCC TERM 228 269700 - 269714 + g 70 -11.4 -2.54896 | opp_overlap 269692 269689, overlap 269697 AGAATCAGGCGGCTG TGGCCG CCC CGGCCA TACGTTCCATCCACA Neut_0255 270256 - 269810 - | cell division protein MraZ Neut_0256 270922 - 270518 - | hypothetical protein Neut_0257 271100 - 271369 + | transcriptional antiterminator, Rof Neut_0258 272301 - 271510 - | glycosyl transferase family protein TERM 229 272099 - 272052 - G 82 -8.4 -4.57569 | opp_overlap 272057 272064, overlap 272056 TGATCGGCTCAAAAA CCACCCGGGCACCTGCTCGTTT AGCT AAACGAGCAGTTGCATCAGTAG AATTGTTATTCACTA TERM 230 272064 - 272087 + g 86 -14 -3.07935 | opp_overlap 272056 272052, overlap 272057 AAACCACCCGGGCAC CTGCTCGTTT AGCT AAACGAGCAG TTGCATCAGTAGAAT Neut_0259 272424 - 272873 + | NUDIX hydrolase Neut_0260 273152 - 273763 + | hypothetical protein Neut_0261 273918 - 274400 + | YbhB and YbcL TERM 231 274650 - 274635 - g 73 -3.2 -5.00884 | overlap 274636 ATCGGGCTGAAAAAA TCGACA AAGT TGTCGG AATAGAATCTCGTGG Neut_0262 274490 - 275014 + | adenine phosphoribosyltransferase TERM 232 275925 - 275909 - g 71 -5.1 -4.58076 | overlap 275912 ATAATGTAGATAAAA CAGGC ATGGTTG GCCTG CACCTCATTCCTACT Neut_0263 275209 - 276522 + | seryl-tRNA synthetase Neut_0264 276569 - 277255 + | hypothetical protein Neut_0265 278010 - 277300 - | phosphoglycerate mutase 1 family protein TERM 233 277501 - 277461 - G 70 -10.6 -2.88822 | gap 1, opp_overlap 277466, overlap 277458 277466 TGTGCGAGACAATTA GCAAACGTTTC-CCCTG CCTGATTT CAGGGAGAATCGTTTGC TGCCAGAAGGGCTGT Neut_0266 279127 - 278060 - | fatty acid desaturase TERM 234 278412 - 278401 - G 76 -4.4 -4.92783 | AATTCAGGATAAAAA TTGC GACA GCAA CCACATACCAGAGCA Neut_0267 279592 - 279149 - | hypothetical protein Neut_0268 280414 - 279608 - | nucleotidyl transferase Neut_0269 281618 - 280458 - | aminotransferase, class V TERM 235 282047 - 282080 + H 93 -11.3 -4.24948 | opp_overlap 282054 GATGGGGTTGTGTTG TATGAGATCCTTTTA AAAA TAAAAGAATCTCATA TTTTCAATCTCGTGA Neut_0270 282222 - 282602 + | ATP synthase protein I Neut_0271 282634 - 283443 + | F0F1 ATP synthase subunit A TERM 236 283642 - 283660 + G 86 -6 -5.1356 | overlap 283644 GCCTGAAATGATTCC TACCTTGC AGG GTAAGGTG TTTTTGTTGCTGGGA Neut_0272 283487 - 283759 + | F0F1 ATP synthase subunit C Neut_0273 283799 - 284272 + | F0F1 ATP synthase subunit B Neut_0274 284273 - 284809 + | ATP synthase F1, delta subunit Neut_0275 284822 - 286363 + | F0F1 ATP synthase subunit alpha Neut_0276 286367 - 287251 + | F0F1 ATP synthase subunit gamma Neut_0277 287282 - 288664 + | F0F1 ATP synthase subunit beta Neut_0278 288690 - 289112 + | F0F1 ATP synthase subunit epsilon TERM 237 289137 - 289191 + F 93 -11.8 -3.96156 | opp_overlap 289155 289156, overlap 289138 289156 ATTAGTGTTCAATGG TAATGTGTTTATAAAAAAGGGCGATT CAT AATCGCCTTTTTTTATAAACAGAAGG TATTTTGTTAGCTGT TERM 238 289138 - 289190 + F 86 -13.1 -2.96609 | opp_overlap 289155 289156, overlap 289137 289156 TTAGTGTTCAATGGT AATGTGTTTATAAAAAAGGGCGATT CAT AATCGCCTTTTTTTATAAACAGAAG GTATTTTGTTAGCTG TERM 239 289173 - 289155 - f 91 -7.4 -5.24129 | opp_overlap 289138 289137 289156, overlap 289156 TGTGTTTATAAAAAA GGGCGATT CAT AATCGCCT TTTTTTATAAACAGA TERM 240 289156 - 289172 + F 100 -10.9 -5.60993 | opp_overlap 289155 289156, overlap 289138 289137 GTGTTTATAAAAAAG GGCGATT CAT AATCGCC TTTTTTTATAAACAG TERM 241 289172 - 289156 - f 85 -10.9 -3.73995 | opp_overlap 289156 289138 289137, overlap 289155 GTGTTTATAAAAAAG GGCGATT CAT AATCGCC TTTTTTTATAAACAG TERM 242 290273 - 290293 + G 74 -7.6 -4.15565 | overlap 290265 AAACGTGGCCATCTC GGATGGAT CGATT GTCCATCC TTTTAGCATGATAGA Neut_0279 289359 - 290735 + | UDP-N-acetylglucosamine pyrophosphorylase TERM 243 291807 - 291819 + G 75 -9.1 -3.87737 | opp_overlap 291799 AATCCAATTGCTGAT CCAGC TAC GCTGG TTATTGGTATTTCTC Neut_0280 290775 - 292622 + | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TERM 244 293065 - 293112 + G 86 -13.6 -3.53091 | gap 1 GCTGTCATGGTTGAT TGCATGACGGATAATCGTACACG AAC CGTG-GCGGATGTTCGTCATGCA TTTACCAAGCACGGT Neut_0281 292765 - 293490 + | hypothetical protein TERM 245 293638 - 293625 - g 87 -8.1 -4.7629 | opp_overlap 293617 293625, overlap 293617 GTAGTAACCGAAAAA TCCGG TTTG CCGGA TCGCTTGAAGACCAT Neut_0282 293493 - 294029 + | crossover junction endodeoxyribonuclease RuvC Neut_0283 294026 - 294610 + | Holliday junction DNA helicase RuvA ruvB 294629 - 295669 + | Holliday junction DNA helicase B Neut_0285 295730 - 296143 + | 4-hydroxybenzoyl-CoA thioesterase TERM 246 296363 - 296394 + G 70 -4.4 -4.60041 | overlap 296365 TCAGCGAGCGGCCAG TGCGCGCCATGC AGCAGGTA GTATGGAGCGTA TTTTTGAAGCTGGAT Neut_0286 296136 - 296840 + | MotA/TolQ/ExbB proton channel TERM 247 297180 - 297166 - g 73 -2.8 -5.00895 | overlap 297168 TGCAGCAGATAAAAA TGTTCG TTA CGAAGA GGTAATTCAAGTAAT Neut_0287 296837 - 297253 + | biopolymer transport protein ExbD/TolR TERM 248 297552 - 297524 - g 84 -2.4 -5.55769 | gap 1, overlap 297529 GGCCACAACAAAAAA CTCAACC-CCAGC CTCA GCCGGTGATCAAG GCGACACCCCCTCCG Neut_0288 297274 - 298170 + | proline-rich region tolB 298209 - 299480 + | translocation protein TolB Neut_0290 299543 - 300064 + | OmpA/MotB domain-containing protein Neut_0291 300064 - 300885 + | TPR repeat-containing protein TERM 249 301353 - 301339 - g 87 -10 -4.34402 | TTCTGGATATCAAAA CACCAG GTT CTGGTG AGATGGAAAAAAATT TERM 250 301472 - 301458 - g 73 -5.6 -4.65895 | opp_overlap 301458 TGGGCGATGCAAAAA CTCCTG ACG CTGGAG TTAGCTAACATCTGC Neut_0292 300987 - 301622 + | radical SAM domain-containing protein Neut_0293 301644 - 302324 + | exsB protein Neut_0294 302678 - 302325 - | dihydroneopterin aldolase Neut_0295 302764 - 303366 + | hypothetical protein Neut_0296 304400 - 303384 - | putative metalloendopeptidase, glycoprotease family protein TERM 251 303427 - 303443 + g 91 -8.7 -4.87291 | overlap 303416 TTGATGGTAAAGCTG CCATCTG ATC CAGGTGG TTTTTCGTTGAGCTG rpsU 304677 - 304889 + | 30S ribosomal protein S21 Neut_0298 304921 - 305370 + | GatB/Yqey domain-containing protein TERM 252 306105 - 306085 - g 100 -3.9 -6.02546 | opp_overlap 306096, overlap 306088 TGAAAGCAAAAAAAA CTATGACCG TTT CCGTCATCG GATCATGTTCCCTAT Neut_0299 305465 - 307258 + | DNA primase Neut_0300 307440 - 309689 + | RNA polymerase sigma factor RpoD TERM 253 309828 - 309855 + T 100 -14.4 -3.53091 | opp_overlap 309828 CACCATTCAATCAAA TAGTTATGGGTT ATAT AACCCATAACTA TTTCCGCAAACCGCT TERM 254 309855 - 309828 - T 100 -14.4 -3.94002 | opp_overlap 309828 CACCATTCAATCAAA TAGTTATGGGTT ATAT AACCCATAACTA TTTCCGCAAACCGCT TERM 255 309869 - 309885 + T 71 -5.1 -4.46581 | TATTTCCGCAAACCG CTACTTC GTT GGAGTGG TTTTGTCACCTTTTC Neut_0301 310015 - 309869 - | phage-related integrase TERM 256 310339 - 310354 + H 88 -4 -5.54907 | overlap 310341 ACTTATTAATGGTGA TTTGAG GTAA CTCAGA TTTTTATTTTATAGA TERM 257 310485 - 310498 + H 82 -6.7 -5.00616 | ATTCAAATAGCTCTA CGGAA GCCT TTCCG TTTTTTGACAAAGGA Neut_0302 310522 - 310725 + | cold-shock DNA-binding domain-containing protein TERM 258 310742 - 310776 + T 74 -10.9 -2.62792 | opp_overlap 310748, overlap 310748 TAAGACTTGATCTGA TAAAAAGCCCAGC CCTTAAGAA GCTGGGCTTTTTG CTGTTTACCCTACAT TERM 259 310748 - 310770 + T 87 -7.7 -4.93696 | opp_overlap 310748, overlap 310742 TTGATCTGATAAAAA GCCCAGC CCTTAAGAA GCTGGGC TTTTTGCTGTTTACC TERM 260 310770 - 310748 - T 90 -9.1 -4.85599 | opp_overlap 310748 310742 TTGATCTGATAAAAA GCCCAGCCC TTAAG AAGCTGGGC TTTTTGCTGTTTACC Neut_0303 312127 - 311300 - | integrase catalytic subunit TERM 261 312134 - 312146 + r 93 -4.8 -5.48213 | opp_overlap 312118 312130, overlap 312132 CCGGCACATCAGGCC GACC GGGTA GGTC TTTTTCTTTTGGGTG Neut_0304 312471 - 312175 - | transposase IS3/IS911 family protein Neut_0305 313575 - 312940 - | cytochrome c, class I Neut_0306 313688 - 314290 + | hypothetical protein Neut_0307 314398 - 315210 + | methionine aminopeptidase Neut_0308 315270 - 315998 + | ribonuclease PH Neut_0309 316017 - 316631 + | putative deoxyribonucleotide triphosphate pyrophosphatase Neut_0310 316666 - 317901 + | coproporphyrinogen III oxidase TERM 262 318919 - 318932 + G 76 -6.7 -4.56597 | opp_overlap 318919 GGAACCTAAAGAGGA TCGTG CTTA CACGA TTTTTGCAGAGACAC Neut_0311 317933 - 319732 + | copper-resistance protein, CopA family protein Neut_0312 319729 - 320544 + | copper resistance B precursor Neut_0313 321172 - 320585 - | hypothetical protein Neut_0314 321264 - 321581 + | hypothetical protein Neut_0315 323599 - 321686 - | ABC transporter-related protein TERM 263 322828 - 322842 + g 93 -9.2 -4.91852 | TGAAATCTTCCATAT GCGCGC GCT GTGCGC TTTGTTTTTCGTGCG TERM 264 322897 - 322930 + g 74 -4.5 -4.81685 | opp_overlap 322901 322902, overlap 322902 CAGCACAGGCGCGTT CAAAGGCTGTGTAGC CGCC GCGATACAGCGTTAG TTTTTGCTGATTAAT TERM 265 324998 - 325015 + G 79 -7.7 -4.57569 | overlap 324985 TACTGCTGGCCGTTG CCATCAC TGTG GTGGTGG TTTTTCAGCGGCTGC Neut_0318 324955 - 326661 + | sodium/hydrogen exchanger Neut_0320 327243 - 328298 + | methyltransferase type 11 Neut_0321 328366 - 328638 + | hypothetical protein Neut_0322 329490 - 328816 - | tRNA (guanine-N(7)-)-methyltransferase thiG 330329 - 329523 - | thiazole synthase Neut_0324 330589 - 330389 - | thiamine biosynthesis protein ThiS Neut_0325 330816 - 331403 + | hypothetical protein TERM 266 332286 - 332298 + G 76 -6.3 -4.7173 | CGGCGGAAAGAGGTT TCCAT CTG ATGGA TTTTTCACTGTACTC Neut_0326 331400 - 332932 + | hypothetical protein TERM 267 332987 - 333001 + G 78 -6.4 -4.80959 | opp_overlap 332987 AGTCGTTGGTATGAA TCAGCG CAA TGCTGA TTTTATTCTGCGTTA TERM 268 333600 - 333579 - g 70 -9.5 -3.19936 | gap 1, opp_overlap 333585, overlap 333582 AATTACCCAATTGAA CAACACCCGG ATA CCG-GTGTTG CCATCAGTGGACTCA Neut_0327 332982 - 333887 + | alpha-L-glutamate ligase-like protein cls 335562 - 334084 - | cardiolipin synthetase TERM 269 335417 - 335397 - G 71 -7.5 -4.11216 | GCGGTAGCGCCAAAA TCGGCATCG CGA CGAGGCCAA CAGCCCACGCGACGG Neut_0329 336763 - 336224 - | AmiS/UreI transporter TERM 270 337631 - 337645 + H 79 -4.2 -5.1925 | CTCACCTTCCATTTT GATGCT CAT GGCGTC TTTTTTCCATTATCA TERM 271 338520 - 338532 + G 73 -10.5 -3.31792 | opp_overlap 338503 338504 CAGGCGCCCGCGAAG GCGCG CAC CGCGC TTATGGCCCTACTGG Neut_0331 338000 - 339160 + | hypothetical protein TERM 272 339203 - 339162 - T 100 -13 -3.53012 | gap 1, opp_overlap 339168 TTTTTCGTTTCTAAA CGGC-AAGACGCCCGAGAG GATAT CACCCGGGCGTCTTTGCTG CGGATTGAGTAGTAT TERM 273 339168 - 339196 + T 100 -12.3 -3.74747 | opp_overlap 339162 GTTTCTAAACGGCAA GACGCCCGAGAGG ATA TCACCCGGGCGTC TTTGCTGCGGATTGA Neut_0332 339710 - 339381 - | integrase, catalytic region TERM 274 339789 - 339750 - R 85 -11.6 -3.49102 | overlap 339751 ATATTTGTGACAGAA CTCCTTTTATCAACCAGC TCAG GCTGGTCGATAAATGAAA TGCCGGTATCTATGG TERM 275 339788 - 339751 - R 84 -12.9 -2.6914 | overlap 339750 TATTTGTGACAGAAC TCCTTTTATCAACCAGC TCAG GCTGGTCGATAAATGAA ATGCCGGTATCTATG Neut_0333 340813 - 339806 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 276 340001 - 340024 + g 100 -7.4 -5.26875 | GGTGTAAGCAAGGAT GCCGTTCAAA GTCG TTTGCGCGGC TTTTTTCATTGCAGC TERM 277 340462 - 340428 - G 70 -4.9 -4.66938 | overlap 340429 ACGCCCAACACAAAA GTCATGTCGAGGCCC TTGCC GGGAGCCGACATGAG CACAAATTTTGCGCC flgA 341696 - 341001 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 278 341744 - 341759 + H 90 -9 -4.60889 | overlap 341753 CAGGACGGTCAGTTT TTGCCG CTGA CGGCAA TTTTTGCCGCTGGTT Neut_0335 341923 - 342333 + | flagellar basal-body rod protein FlgB Neut_0336 342339 - 342743 + | flagellar basal-body rod protein FlgC flgD 342756 - 343427 + | flagellar basal body rod modification protein TERM 279 344436 - 344449 + G 70 -4.5 -4.63527 | overlap 344414 344413 CGCACGCTCGGGCAG CTTGC GTTG GCAGG TTTTTCCAATCCTAA TERM 280 344530 - 344550 + G 77 -13.3 -2.55015 | overlap 344526 344535 GGTTGCCGTTGATTG GCACGCCAG AGA CTGGTGTGC TGGGTTCACTGCAAT flgE 343443 - 344702 + | flagellar hook protein FlgE flgF 344743 - 345486 + | flagellar basal body rod protein FlgF flgG 345525 - 346307 + | flagellar basal body rod protein FlgG flgH 346494 - 347234 + | flagellar basal body L-ring protein flgI 347256 - 348383 + | flagellar basal body P-ring protein TERM 281 348787 - 348772 - g 77 -9 -4.04209 | GGAAATGATGAGAAA CCACTG GTTT CAGTGG CGCCGGGGCAAACAA Neut_0343 348397 - 349404 + | flagellar rod assembly protein/muramidase FlgJ Neut_0344 349663 - 351066 + | flagellar hook-associated protein FlgK TERM 282 351052 - 351070 + F 76 -6 -4.56597 | opp_overlap 351062 TCGCTGTTTGATTCG TTGCTCAG AAT CTGATCAA TTTTTGACAGAAAAG flgL 351095 - 351994 + | flagellar hook-associated protein FlgL Neut_0346 352071 - 352616 + | hypothetical protein Neut_0347 353736 - 352606 - | hypothetical protein TERM 283 353122 - 353098 - G 82 -14.4 -2.74192 | opp_overlap 353095, overlap 353095 GATGTGTGAACAGTA GCTGCTGATC TTGCG GATCAGCAGC AGGTCTGTCAGTACA Neut_0348 353893 - 354366 + | hypothetical protein Neut_0349 354356 - 354919 + | GCN5-related N-acetyltransferase Neut_0350 354995 - 355267 + | hypothetical protein TERM 284 355684 - 355694 + G 76 -3.2 -5.1101 | CCCGCGTTGGTGGAG CAGG GTA TCTG TTTTTTGCGTCGTAA TERM 285 357078 - 357093 + G 79 -11.8 -3.29829 | TGCCTGTGCATTGCG CCCCGG TGTA CCGGGG TTATCGGAGAATATC Neut_0351 355318 - 357444 + | polyphosphate kinase Neut_0352 359192 - 357465 - | sulphate transporter TERM 286 358161 - 358147 - G 79 -7 -4.65916 | overlap 358148 GCCAGCGGAATAAAA CGCGCC AGG GGCGCT GCGATCAATAAAATG TERM 287 358160 - 358148 - G 75 -10.5 -3.39068 | overlap 358147 CCAGCGGAATAAAAC GCGCC AGG GGCGC TGCGATCAATAAAAT TERM 288 359067 - 359053 - G 76 -8.6 -4.21768 | GAAGCAATGCCAAAA GCCATT GCT AATGGC AGCGCTACCAGGCCA Neut_0353 359539 - 359189 - | transcriptional regulator, ArsR family protein Neut_0354 360041 - 359904 - | hypothetical protein Neut_0355 360560 - 360168 - | putative insertion sequence transposase protein TERM 289 360641 - 360656 + H 72 -10.4 -2.92792 | opp_overlap 360640 360637, overlap 360637 CTAGTTACACAGCAG CCCTGG TTTA CCAGGG TACTTTGCAATGAGT TERM 290 360855 - 360869 + H 79 -2.8 -5.36441 | overlap 360857 GAAGTGCCATAATTC GGCAAA ATC TTTGGC TTTTTTGTGTGAAGA Neut_0356 361015 - 362010 + | membrane-bound metal-dependent hydrolase Neut_0357 362559 - 363806 + | transposase, mutator type Neut_0358 363872 - 364168 + | transposase IS3/IS911 family protein TERM 291 364209 - 364197 - g 87 -4.8 -5.48213 | opp_overlap 364197 364207, overlap 364199 CACCCAAAAGAAAAA GACC TACCC GGTC GGCCTGATGTGCCGG TERM 292 364336 - 364324 - g 74 -7.7 -4.16284 | ACATGGTTTAATAAA CTGGA CAG TCCAG TTAAGAGAAAATAAC Neut_0359 364165 - 364350 + | hypothetical protein Neut_0360 364369 - 364665 + | transposase IS3/IS911 family protein TERM 293 364706 - 364694 - f 77 -4.8 -5.00138 | CACCCAAAGGAAAAA GACC TATCC GGTC GGCTTGATGTGCCGA Neut_0361 364924 - 365541 + | integrase catalytic subunit TERM 294 365542 - 365554 + F 70 -5.5 -4.4078 | AAAAATGTTGCTTAA CTGGA GTG TCCGG TTTTACTTGACCAGG Neut_0362 365613 - 365849 + | hypothetical protein TERM 295 366580 - 366596 + T 91 -9.5 -4.63542 | opp_overlap 366571 AAAAATGAAGTTTTA CTCCTTT TCC AAAGGAG TTTTTCACCCTTATG Neut_0363 366816 - 366607 - | hypothetical protein Neut_0364 367060 - 366806 - | hypothetical protein TERM 296 367298 - 367280 - H 71 -4.6 -4.72486 | overlap 367271 367293 367294 GACAAACCGCAAAAA TGCAGA AAATCAA TCTGCA CACGCAGCGCTTGCT TERM 297 367646 - 367669 + H 79 -11.8 -2.71364 | overlap 367631 CCAGGATCGGGATTC TGGTGGTTGA TCTA TCAGCCACCA TCGTTCCCACCGTAA TERM 298 367956 - 367933 - H 100 -15.4 -3.92542 | CCTATTTTCAAAGAA GTATGCACCG TTTA CGGTGCATAC TGAACGTTAAGCGCA TERM 299 368696 - 368715 + G 76 -5.1 -4.87318 | opp_overlap 368699 TAATTGATATTGAAT TAATGCT TAGACC AGCATTA TTTTTGGATTTTGAC TERM 300 368759 - 368778 + G 70 -4.2 -4.65895 | overlap 368760 GCAACCAAGTTCCAT ATCGTGTG TCCG CGCACGAG TTTTTAGATGCAAAA Neut_0365 367984 - 369246 + | hypothetical protein Neut_0366 369344 - 369841 + | hypothetical protein TERM 301 370130 - 370117 - g 70 -3.1 -4.82901 | GCTGGTTTAGAAAAA GATAC ATAG GCATC GGAAGAAATCATATA Neut_0367 369843 - 370373 + | hypothetical protein TERM 302 370429 - 370377 - f 91 -11.2 -3.84389 | gap 2, opp_overlap 370418, overlap 370378 AAGAAAACCTAACAA GGCGCTGCAGCCGACCGCCATCCCGC TAC GCAGGCTGTCGG-CGGCTG-AGCTCA GGCGTTATGTTCTCG TERM 303 370428 - 370378 - f 89 -14.7 -2.89007 | gap 2, opp_overlap 370418, overlap 370377 AGAAAACCTAACAAG GCGCTGCAGCCGACCGCCATCCCGC TAC GCAGGCTGTCGG-CGGCTG-AGCTC AGGCGTTATGTTCTC Neut_0368 370453 - 371175 + | hypothetical protein TERM 304 371236 - 371188 - f 82 -12.4 -2.95007 | gap 2, opp_overlap 371185, overlap 371185 TAGCGAACATAACTA CTGGTTCCAGCCGACGTCCCCGCC TTC GGCAGGTCCG-CGGCTG-AACCTG GCGTTATGCAATCAA TERM 305 371607 - 371597 - g 73 -3.2 -5.03145 | CAACTTGCCAAAAAA TCGG TAG CCAA ACCTACTGCAACTAA Neut_0369 371338 - 371622 + | hypothetical protein TERM 306 371684 - 371634 - f 91 -11.3 -3.82191 | gap 2, overlap 371635 CTAAGTGCATAACAA GTGCGTGCACGGGATGTCAAAAAGC TGC GCTTTTAGCCA-CCCGTG-ACGCAG GCGGTTGGGCGTCAT TERM 307 371683 - 371635 - f 89 -14.8 -2.88832 | gap 2, overlap 371634 TAAGTGCATAACAAG TGCGTGCACGGGATGTCAAAAAGC TGC GCTTTTAGCCA-CCCGTG-ACGCA GGCGGTTGGGCGTCA Neut_0370 371710 - 372627 + | hypothetical protein Neut_0371 372776 - 373120 + | hypothetical protein Neut_0372 374612 - 373515 - | FMN-dependent alpha-hydroxy acid dehydrogenase TERM 308 374135 - 374159 + g 73 -5.7 -4.46404 | overlap 374136 374138 TGATGGCGTTGTAAC CTGCTGCAATG GTT CGTTGCAGTAA TTTTAGTGTTCGTTC TERM 309 374138 - 374156 + g 70 -9.6 -3.18389 | overlap 374136 374135 TGGCGTTGTAACCTG CTGCAATG GTT CGTTGCAG TAATTTTAGTGTTCG Neut_0373 375405 - 374722 - | putative hydroxylase Neut_0374 377643 - 375433 - | TonB-dependent siderophore receptor TERM 310 376789 - 376800 + g 80 -3 -5.25772 | opp_overlap 376789, overlap 376792 GGTACCCCAGTAATA TTTC ACTG GAAA TTTTTCTTGTGGTTT TERM 311 377502 - 377537 + g 80 -2.6 -5.44721 | gap 1, overlap 377504 CTTTTTCAGCTTCGG CACCTGCTTCTACCT TGATGGT AGGGAGAA-CAGGCG TTTTTTTGGGGTAAT Neut_0376 378022 - 378492 + | transposase, IS4 family protein Neut_0377 379277 - 380335 + | hypothetical protein TERM 312 380736 - 380760 + T 100 -12.9 -4.90778 | opp_overlap 380733 380731 TCACTCAAGATACTG TCCGGCCAG GTAGATG CTGGCCGGA TTTTATTTGACTCGA Neut_0379 381474 - 380776 - | Sel1 domain-containing protein TERM 313 380811 - 380836 + g 87 -8.4 -4.77759 | gap 1 GTTTTTGGGAAGCTT TCTGTGAAGCG CGGAC CGCTTC-CAGA TTTTTGATGGCTTCT TERM 314 381263 - 381281 + g 89 -2.5 -5.83226 | gap 1 TCAGGAGTCAGTCCG TCAT-CCA GTGT TGGCATGA TTTTTTTCTTCAGTT Neut_0380 382704 - 381580 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein Neut_0381 383806 - 382697 - | 3-dehydroquinate synthase TERM 315 383543 - 383555 + g 80 -4.7 -5.1244 | ATCGAAAATCAGATT CAGGG TTT CCCAG TTTTTATATTGCTCA TERM 316 383615 - 383629 + g 79 -7 -4.59773 | overlap 383617 TACCTGGTGTTCAGC CAGCGC GCT GCGCAG TTTTTCCAGATAAAG Neut_0382 384502 - 383855 - | shikimate kinase Neut_0383 385937 - 384576 - | peptidase U32 TERM 317 386625 - 386613 - g 71 -7.7 -4.07568 | GTTTCTGGTCTAAAA CTACC TGT GGTAG CAACGCATCCGGTGC Neut_0384 386028 - 389528 + | DNA polymerase III, alpha subunit Neut_0385 389733 - 389542 - | putative transmembrane protein TERM 318 390680 - 390668 - g 71 -7.7 -3.99678 | ATCTGGAGAATGAAA TCAGC TTG GCTGA AATGCGGGAGAGGGG Neut_0386 389884 - 390837 + | tRNA delta(2)-isopentenylpyrophosphate transferase Neut_0387 392635 - 391370 - | two component, sigma54 specific, transcriptional regulator, Fis family protein TERM 319 391450 - 391472 + g 73 -6.2 -4.43681 | opp_overlap 391456, overlap 391452 CCAAGCCTGCGCGCT CAGCAACACG GGT CATGTTGCCG TTTTCCTGTTCGATC TERM 320 392863 - 392878 + r 73 -6.2 -4.38712 | ATTGTGCCTTGCATG TTTTGC CTGT GCAAAA TTTTGTGAAAATGCC Neut_0388 395110 - 392936 - | periplasmic sensor signal transduction histidine kinase TERM 321 394694 - 394706 + g 78 -6.2 -4.87786 | opp_overlap 394691, overlap 394691 394692 AGCCAGATCAATTGC GGCG GCCCG CGCC TTTTTCTGCAATTCC Neut_0389 395725 - 395120 - | putative proline rich signal peptide protein Neut_0390 397007 - 395727 - | sun protein TERM 322 395788 - 395757 - G 88 -3.6 -5.66684 | gap 1, opp_overlap 395775 CAAGGCATAAAAAAA GCCATCATGGTGCGG TCC CGGCAGCA-GCTGGC CGTTGTTAATTTCTT TERM 323 396408 - 396386 - G 70 -9.8 -3.29263 | AGACCGGCCTGATAA GTTGCAGGGC GCT GCCCCCCAAC CATTCGGAGCCAATC TERM 324 397037 - 397020 - R 80 -5.5 -5.07486 | opp_overlap 397021, overlap 397021 CATTTTCAAGAAAAA TCACAGG TGAC CCTGTGT GGTTTTTTGGAAATG TERM 325 397036 - 397021 - R 75 -9 -3.63768 | opp_overlap 397021, overlap 397020 ATTTTCAAGAAAAAT CACAGG TGAC CCTGTG TGGTTTTTTGGAAAT TERM 326 397021 - 397036 + r 71 -9 -3.38056 | opp_overlap 397021 397020 ATTTTCAAGAAAAAT CACAGG TGAC CCTGTG TGGTTTTTTGGAAAT Neut_0391 397970 - 397020 - | methionyl-tRNA formyltransferase TERM 327 397311 - 397293 - G 70 -8.8 -3.56643 | GGGATACGGGTTAAA TGTCCGGA TCA TCCGGTCA ATATGGGTGGAATCA TERM 328 397348 - 397360 + g 72 -4.1 -4.7497 | CAATCGATCTCAGCC TCGGA TTT TCTGA TTTTTGCTGCATAAC Neut_0392 398539 - 398033 - | peptide deformylase TERM 329 398259 - 398287 + g 71 -6 -4.371 | opp_overlap 398251, overlap 398260 TCAAAAATACCGGGT ACGGAAAGACAG CCTTC CTGTGTTTCCGA TTTTCCTGTGCTGGC TERM 330 398260 - 398286 + g 70 -9.5 -3.21778 | opp_overlap 398251, overlap 398259 CAAAAATACCGGGTA CGGAAAGACAG CCTTC CTGTGTTTCCG ATTTTCCTGTGCTGG Neut_0393 398714 - 399742 + | peptidoglycan-binding LysM TERM 331 399749 - 399735 - f 76 -6.4 -4.58395 | TGGATGTTGTAAAAA CACCCT GAC AAGGTG GTGCAAAGTTACTAT Neut_0394 399841 - 400962 + | DNA protecting protein DprA Neut_0395 401044 - 401502 + | hypothetical protein TERM 332 402877 - 402889 + G 74 -4.7 -4.8622 | TCTGGCAATTTTCTA CCCGG CAG CCGAG TTTTTGGTTACAACC Neut_0396 401630 - 404128 + | DNA topoisomerase III Neut_0397 404432 - 404181 - | hypothetical protein Neut_0398 404784 - 406085 + | 3-phosphoshikimate 1-carboxyvinyltransferase Neut_0399 406165 - 406839 + | cytidylate kinase TERM 333 408566 - 408554 - g 76 -7.7 -4.3587 | GAGGAAGAAGATAAA GCGAT CAG ATCGC TGGCTCCATCTCCAG rpsA 406940 - 408652 + | 30S ribosomal protein S1 Neut_0401 408662 - 408979 + | integration host factor, beta subunit Neut_0402 409502 - 410197 + | orotidine 5'-phosphate decarboxylase Neut_0403 411232 - 410192 - | squalene/phytoene synthase Neut_0404 412507 - 411254 - | diaminopimelate decarboxylase TERM 334 412383 - 412398 + g 71 -10.4 -3.06183 | AAGCTTTGGTAAGCC GTGCGG ATTG CCGCAC TTGAGTAAACATAGC Neut_0405 413254 - 412652 - | putative lipoprotein TERM 335 412883 - 412864 - G 100 -12.2 -4.72272 | opp_overlap 412861 412860 412864 CCGGTGTATTAAAAA TCTGGGTG AACT CACCCAGA TCAATTTTTAACAGA TERM 336 412864 - 412883 + g 74 -12.2 -2.83903 | opp_overlap 412864, overlap 412861 412860 CCGGTGTATTAAAAA TCTGGGTG AACT CACCCAGA TCAATTTTTAACAGA Neut_0406 414156 - 413251 - | hypothetical protein TERM 337 413669 - 413693 + g 75 -10.2 -3.42659 | opp_overlap 413673, overlap 413673 GCCTGATTTTTTTTA TTAAGCAGAT TGTTT ATCTGCTTAA TTACTGTGTTTGAAT Neut_0407 415009 - 414182 - | inositol-phosphate phosphatase TERM 338 414452 - 414471 + g 71 -7 -4.12456 | CAGTGCCGCAGAGCC CGGGCGGC GAAT GCCGGCTG TTTTGGGAATCATGT Neut_0408 415060 - 415806 + | RNA methyltransferase Neut_0409 416504 - 415890 - | glutathione S-transferase domain-containing protein TERM 339 417631 - 417647 + G 71 -10.9 -3.03124 | GAAAAATTACCGATC TCACGCT GGC AGCGTGA TCTTACCGACTCGAC Neut_0410 416641 - 418017 + | adenylosuccinate lyase Neut_0411 418155 - 418745 + | GrpE protein TERM 340 420647 - 420671 + G 79 -13.5 -2.83164 | opp_overlap 420637 420636 ACAAGCCGGTCAGCA GGCAGGTCCGG GTG CCGGATCAGCC TCTGCTGGTCAATCC Neut_0412 418809 - 420752 + | chaperone protein DnaK TERM 341 420808 - 420849 + F 89 -9.5 -4.58076 | opp_overlap 420806 420804 420808 420819 CGTACTGAAAATATA CGCAGAGAAAAGAGGAAAT GACT ATTTTCTCTGACCTCTGCG TTTTATATCCCTTAT TERM 342 420849 - 420808 - f 75 -9.5 -3.42605 | opp_overlap 420808, overlap 420806 420804 420819 CGTACTGAAAATATA CGCAGAGAAAAGAGGAAAT GACT ATTTTCTCTGACCTCTGCG TTTTATATCCCTTAT Neut_0413 420943 - 422052 + | chaperone protein DnaJ Neut_0414 425494 - 422150 - | MscS mechanosensitive ion channel Neut_0415 426524 - 425958 - | transcriptional regulator, TetR family protein Neut_0416 427775 - 426582 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 343 427452 - 427462 + g 74 -2.4 -5.1287 | GATATCGCGTTCATG GCCG TAG CGGA TTTTTTCAATCTCGA Neut_0417 428379 - 427837 - | OsmC family protein Neut_0418 431746 - 429125 - | aminopeptidase N TERM 344 430297 - 430307 + g 70 -3.2 -4.84918 | TTTTGAGGGGAATGT GCAG CGC TTGC TTTTCTGTTTGTCCG TERM 345 430798 - 430771 - G 74 -8.5 -4.03093 | opp_overlap 430778 CAGAATCACGATAAA CGGTTAAGCCT TCTTTC AGGCTTAACTG AAACCAGTCGCGGCA Neut_0419 433078 - 431819 - | peptide methionine sulfoxide reductase Neut_0420 433413 - 433955 + | response regulator receiver protein TERM 346 434441 - 434426 - f 73 -2.5 -5.08601 | GGAGTTGAACAAAAA CGAAC TTTGAT GTCCG GTCAATGGCTACAAA Neut_0422 435042 - 437417 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Neut_0423 438756 - 437500 - | hypothetical protein TERM 347 438590 - 438574 - G 74 -6.5 -4.35327 | opp_overlap 438574, overlap 438569 GTAGTAAAAATGAAA CTGCTCC TGT GGATCAG TTGGATCACTGAATG Neut_0424 439097 - 440371 + | O-acetylhomoserine/O-acetylserine sulfhydrylase Neut_0425 441606 - 440356 - | NnrS family protein TERM 348 441196 - 441210 + g 70 -2.1 -5.00616 | gap 1, opp_overlap 441196 GAGCAAAGGAACAAG TGAGCG GTTA CGC-CA TTTTTTAGCAGCCCA Neut_0426 442633 - 441707 - | Serine O-acetyltransferase TERM 349 442777 - 442813 + H 100 -19.7 -3.14211 | TTGCACTACCGGATT TTCAGGGGTGTCCTT GTGATCA AAGGACACCCCTGAA TTAATAGCCGAGAAT Neut_0427 443032 - 444039 + | glucokinase Neut_0428 444054 - 444701 + | putative transmembrane protein Neut_0429 445104 - 444742 - | hypothetical protein Neut_0430 445810 - 445124 - | 6-phosphogluconolactonase Neut_0431 446448 - 445792 - | hydrolase Neut_0432 447387 - 446455 - | NAD-dependent epimerase/dehydratase TERM 350 447062 - 447047 - G 72 -3.9 -4.78848 | overlap 447048 CTGGCAAAGATAAAA CGGCG TACACC CGCCA GTCGGGCTGATTCGA Neut_0433 448315 - 447380 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Neut_0434 449073 - 448312 - | 2-dehydro-3-deoxyglucarate aldolase Neut_0435 449843 - 449085 - | 3-deoxy-manno-octulosonate cytidylyltransferase Neut_0436 450146 - 451225 + | glycosyl transferase family protein TERM 351 451474 - 451486 + G 82 -4.1 -5.26918 | opp_overlap 451464 451474, overlap 451464 AAAGAGCCTTTAATA CAAGG CGT TCTTG TTTTTTGTGGGGTAT TERM 352 451524 - 451562 + G 70 -3.2 -4.81814 | overlap 451526 451527 TGGCTTGCTCTGGAG TGATTTTTCTGTATCCCT TAC AGGGAAATGGGAAAAATA TTTTATTCTGCTGAT TERM 353 451796 - 451809 + G 72 -3.8 -4.89393 | overlap 451805 GATGGGTTACTTTGT CCAG AATGCG CTGG TTTTTATCGGCTTTG Neut_0437 451348 - 452565 + | O-antigen polymerase Neut_0438 452565 - 453254 + | O-methyltransferase family protein Neut_0439 453307 - 453564 + | hypothetical protein TERM 354 453648 - 453659 + G 100 -5.8 -5.93809 | opp_overlap 453638 AAATACTGATACTGT CAGC TTCA GCTG TTTTTTTTATGACGA Neut_0440 453614 - 454138 + | hypothetical protein Neut_0441 454146 - 454493 + | arsenate reductase and-related protein TERM 355 454503 - 454542 + T 100 -20.2 -2.87404 | opp_overlap 454515, overlap 454495 GGTTGAAGGTTCAAT TTTCGGAGCACAGGCAAT TAGA ATTGCCTGCGCTCCGAAG TCTGGTGGTTAATCT rplS 454940 - 454551 - | 50S ribosomal protein L19 Neut_0443 455757 - 454912 - | tRNA (guanine-N1)-methyltransferase Neut_0444 456271 - 455765 - | 16S rRNA processing protein RimM rpsP 456569 - 456312 - | 30S ribosomal protein S16 Neut_0446 456800 - 458080 + | hypothetical protein Neut_0447 458134 - 458760 + | putative ubiquinone biosynthesis protein Neut_0448 458794 - 459354 + | hypothetical protein Neut_0449 459347 - 459820 + | Holliday junction resolvase-like protein Neut_0450 459807 - 460310 + | pyrimidine regulatory protein PyrR TERM 356 461382 - 461396 + G 73 -6.4 -4.45399 | overlap 461383 TTCTCAATCGGTCAT TCTACC CCA GGTAGG TTTTGGTATTGCTGT pyrB 460498 - 461448 + | aspartate carbamoyltransferase catalytic subunit Neut_0452 461463 - 462734 + | dihydroorotase TERM 357 463373 - 463385 + G 80 -3.4 -5.31855 | TGATAACCTGCTTGA TGCA ACCAA TGCA TTTTTCTTGTTGATA Neut_0453 462858 - 464963 + | oligopeptidase A TERM 358 465127 - 465151 + F 100 -7.8 -5.77988 | GTATAATTAACTTTA GCGGTGCGGA ATCAA TTCGAACCGC TTTTTTTCTGTCTGT TERM 359 465489 - 465504 + G 70 -9 -3.64685 | GCTCATTGCCAGCAG TTGGCG CAGT CGCCAA TTATTGCCAGATTTT Neut_0454 465199 - 466350 + | carbamoyl phosphate synthase small subunit Neut_0455 466376 - 469573 + | carbamoyl-phosphate synthase, large subunit TERM 360 469704 - 469721 + F 100 -4.1 -5.80727 | opp_overlap 469704 TTCGTTATTATTTAA CAGATTC AACA GATTCTG TTTTTTATTGTTTTT Neut_0456 469758 - 470234 + | transcription elongation factor GreA Neut_0457 471220 - 470249 - | ErfK/YbiS/YcfS/YnhG family protein TERM 361 473449 - 473460 + G 73 -5.8 -4.49389 | GCGATGAAAATGGCT CGAC GTCA GTCG TTTTGGTTGTGGAAT Neut_0458 471867 - 473693 + | acyl-CoA synthetase TERM 362 474381 - 474395 + G 70 -9.2 -3.55191 | opp_overlap 474380 474381, overlap 474384 CTGGCTTGAGACAAC CCGTCC CGT GGGCGG TATTTATGCAATTGA Neut_0459 473782 - 474705 + | NAD-dependent epimerase/dehydratase Neut_0460 474817 - 475071 + | phosphopantetheine-binding TERM 363 475111 - 475089 - g 73 -6.2 -4.57341 | AATCTGCTGGAAAAA CTTGATGCAG CTG CAGCAGCAAG GAAAGCACAATTACC TERM 364 475516 - 475528 + G 71 -7.7 -4.12188 | GTATTCTAAGTGGAG CGGAT GTT ATCCG TTTTCGCCATAATGA Neut_0461 475071 - 476258 + | 8-amino-7-oxononanoate synthase Neut_0462 476310 - 477068 + | hypothetical protein Neut_0463 477256 - 478068 + | zinc/iron permease Neut_0464 480690 - 478075 - | dolichyl-phosphate beta-D-mannosyltransferase TERM 365 478465 - 478484 + g 80 -4.4 -5.11033 | gap 1 TGCTTCTCCTGTTGT TTGCCTGAT TTC ATCAG-CAA TTTTTTCGACTTCTG Neut_0465 481815 - 480799 - | aminodeoxychorismate lyase Neut_0466 483184 - 481943 - | beta-ketoacyl synthase TERM 366 481996 - 482013 + g 70 -4.2 -4.65153 | CAAATCCGAATGAGT TTGACA GCGCGG TGTCAA TTTTCATTTCTCTGG Neut_0467 483464 - 483219 - | acyl carrier protein Neut_0468 484373 - 483630 - | 3-oxoacyl-(acyl-carrier-protein) reductase Neut_0469 485368 - 484430 - | malonyl CoA-acyl carrier protein transacylase TERM 367 484987 - 485004 + g 83 -9.9 -4.21631 | TGGCTGCCATGCCTC CTGTTCC TTCG GGAACAG TTTCTTGCATGACTT Neut_0470 486334 - 485372 - | 3-oxoacyl-(acyl carrier protein) synthase III Neut_0471 487364 - 486345 - | putative glycerol-3-phosphate acyltransferase PlsX rpmF 487624 - 487442 - | 50S ribosomal protein L32 Neut_0473 488152 - 487649 - | hypothetical protein Neut_0474 488176 - 488817 + | maf protein TERM 368 488818 - 488850 + F 71 -2.1 -5.10601 | gap 1, overlap 488822 488835 488836 488838 GTGGAGATACTGTAA CCACTTGGGCTTTT ACTTGA GAAAGCCGAA-TGG TTTTTCTGGTTTTCT TERM 369 489279 - 489295 + G 83 -2.9 -5.52384 | overlap 489276 489282 GTTAACGCTTTCCCG GAATCGG TTC CTGATCC TTTTTTTCGTCCGCC Neut_0475 488934 - 489326 + | hypothetical protein Neut_0476 489435 - 490859 + | outer membrane efflux protein Neut_0477 490856 - 492352 + | RND family efflux transporter MFP subunit TERM 370 492381 - 492396 + F 74 -3.9 -4.95843 | GATCGTCTGCGTAAC CGGGC CATATT GCCTG TTTTCTGTTTTATCT TERM 371 493544 - 493564 + G 79 -13.3 -2.85061 | overlap 493541 TTCTGGGCAATATTC GTGCGGCGA TAA TTGCCGCAC TCGTTATCCCGTTAT TERM 372 495143 - 495157 + G 78 -2.1 -5.2291 | gap 1 AAATTGTGGTGCCGG TC-GCG CTAA CGCTGA TTTTTGTTGTGCTCT Neut_0478 492448 - 495657 + | heavy metal efflux pump, CzcA family protein TERM 373 495760 - 495775 + F 93 -2.6 -5.8096 | GGAATTTTTTAGATA GGTAAA TAAA TTTATC TTTTTGTTTTTTATG TERM 374 496333 - 496349 + G 73 -2.9 -5.03747 | overlap 496334 GTGACTGCGTTTCAA TCTCTTC AAG GCAGAGG TTTTTTCAGCGATTT Neut_0479 495931 - 496368 + | hypothetical protein Neut_0480 496393 - 496680 + | hypothetical protein Neut_0481 496677 - 497585 + | hypothetical protein TERM 375 498562 - 498578 + G 71 -5.7 -4.3078 | opp_overlap 498562 GATCAGCCATCAAAA CGGGCGG AAC TCGCGCG TTTGTTGCTCTACTT TERM 376 498588 - 498618 + G 79 -11 -3.52079 | CGCGCGTTTGTTGCT CTACTTGCGCAGCC ACT GGCTGCGCATGCCG TTGTATCGCCTGTTG Neut_0482 497578 - 498705 + | hypothetical protein Neut_0483 500158 - 498716 - | magnesium transporter TERM 377 499051 - 499065 + g 72 -8.6 -3.90291 | GTGCAAGGGCGCGCA CGATCA TGG TGATCG TTTGATTGCCGGAGT TERM 378 500640 - 500656 + H 91 -8.7 -4.96468 | opp_overlap 500637 500634 500639 500635 AGGTACAAACCATAG CCACGAG GCT TTCGTGG TTTTGTTTGAATTTA TERM 379 501927 - 501942 + G 74 -2.5 -5.08601 | TTTGTAGCCATTGAC CGGAC ATCAAA GTTCG TTTTTGTTCAACTCC Neut_0485 501504 - 502424 + | integrase catalytic subunit TERM 380 502778 - 502761 - g 79 -5.5 -5.02777 | ATATACAAAAAGAAA TCTCGCC ACCA GTCGAGA ATAAGGATGAAGATA Neut_0486 502586 - 502891 + | hypothetical protein Neut_0487 503608 - 502949 - | channel protein, hemolysin III family protein Neut_0488 504150 - 503848 - | hypothetical protein Neut_0489 504423 - 504175 - | transglycosylase-associated protein TERM 381 504543 - 504520 - R 93 -12.6 -3.44325 | opp_overlap 504520 ATGTTGGATAATTAA GATGCATACT GATC AGTATGCATC TTTAACGCTTTCCTT TERM 382 504520 - 504543 + r 95 -12.6 -3.65084 | opp_overlap 504520 ATGTTGGATAATTAA GATGCATACT GATC AGTATGCATC TTTAACGCTTTCCTT Neut_0490 504858 - 504532 - | hypothetical protein TERM 383 504977 - 504991 + H 76 -5.8 -4.8048 | opp_overlap 504957 GTACGATACCGTACA TAATGA AAA TCATTA TTTTTCCTATACCCC TERM 384 505605 - 505593 - g 70 -10.5 -2.92613 | overlap 505590 TGGGAGGTGAAAGCA CCCCG AGC CGGGG GATCGTGCAATGCGC Neut_0491 505322 - 506062 + | transcriptional regulator, Crp/Fnr family protein TERM 385 506080 - 506063 - T 78 -11.3 -2.84298 | opp_overlap 506061 506055 TACAGTTCAGAATGA GTGCTGG TTAA CCAGCAC AGTGATCTGTCGTTA Neut_0492 506407 - 506093 - | transport-associated TERM 386 506540 - 506554 + r 83 -4.2 -5.42265 | opp_overlap 506542, overlap 506542 AACCTGTCGAGCAAG AAGCAC CTC GTGCTA TTTTTTCTAATTTAA TERM 387 506542 - 506552 + r 74 -6.8 -4.32919 | opp_overlap 506542, overlap 506540 CCTGTCGAGCAAGAA GCAC CTC GTGC TATTTTTTCTAATTT TERM 388 506855 - 506872 + r 70 -2.7 -4.93318 | GGCACAATGACCAAG CCTATGA TTGT TTATGGG TTTTTATGCATTCTG Neut_0493 507618 - 507277 - | hypothetical protein Neut_0494 508509 - 507676 - | hypothetical protein mtgA 509259 - 508525 - | monofunctional biosynthetic peptidoglycan transglycosylase TERM 389 508890 - 508860 - G 74 -11.1 -3.17982 | opp_overlap 508853 508855 508864 ACAAATTTTTAGCAA GCTGCTGGCTGAT GGTTG AGCCGCCAGCAGC CAGTTTGCGTTGTTT TERM 390 508864 - 508893 + g 78 -10 -3.89435 | opp_overlap 508860, overlap 508853 508855 ATTTTTAGCAAGCTG CTGGCTGATGGT TGAGCC GCCAGCAGCCAG TTTGCGTTGTTTCAG TERM 391 508995 - 508967 - G 71 -6 -4.36914 | gap 1, opp_overlap 508967 TGGTGTTGCATAAAA CGGGCA-TCTTCA GTGG CGATGACTGCCCG TTTAAGATGATTGGA Neut_0496 510089 - 509256 - | shikimate 5-dehydrogenase Neut_0497 510953 - 510123 - | TonB family protein Neut_0498 512904 - 511045 - | ribonuclease II TERM 392 511223 - 511209 - G 70 -10 -3.28924 | opp_overlap 511209 511207 511203 511201 GATTTTCCTTTACAA CAACCG CAC CGGTTG TATTGATGTTTTCCT TERM 393 511209 - 511223 + g 72 -10 -3.34486 | opp_overlap 511209, overlap 511207 511203 511201 GATTTTCCTTTACAA CAACCG CAC CGGTTG TATTGATGTTTTCCT TERM 394 512956 - 512945 - H 89 -3 -5.75342 | opp_overlap 512945 GCGTGCGAAAAAAAA CATT TTCT AATG TTATCCGATTCAACG TERM 395 513233 - 513216 - H 77 -9.9 -3.64703 | opp_overlap 513216 513219 513230, overlap 513219 TTCCTGGTATGGAAA CAACCGT GTAA ACGGTTG TGTATACAACTTCTA TERM 396 513216 - 513233 + H 70 -9.9 -2.90219 | opp_overlap 513216 513219, overlap 513219 513230 TTCCTGGTATGGAAA CAACCGT GTAA ACGGTTG TGTATACAACTTCTA TERM 397 513313 - 513327 + G 78 -3.5 -5.14965 | overlap 513310 513309 ACCTGCATATTGGCG GTGCA CGCAC TGCGC TTTTTTCCTGGGCGT Neut_0499 513261 - 514652 + | glutamyl-tRNA synthetase metH 514706 - 518419 + | B12-dependent methionine synthase TERM 398 518532 - 518542 + F 86 -2.4 -5.68039 | GCGTAATGTAGGGAT GCGG TGG CCGA TTTTTTTGTGCGTTT Neut_0501 518591 - 519934 + | glutamate dehydrogenase TERM 399 520510 - 520481 - g 71 -10.9 -3.03124 | gap 1, overlap 520483 GGTCAGCCGGGAAGA CAGT-TTGCAATGC TAT GCATTGCAACACCG GCTCGCGGCGGGAGA TERM 400 520731 - 520703 - g 100 -12.5 -4.208 | opp_overlap 520703 520702, overlap 520707 GGCCAAAAGTATAAA CAAATACCTGCCG CGT CAGCAGGCACTTG ATTTACAGAAACTGG TERM 401 520727 - 520707 - g 100 -9.7 -4.66388 | opp_overlap 520703 520702, overlap 520703 AAAAGTATAAACAAA TACCTGCCG CGT CAGCAGGCA CTTGATTTACAGAAA TERM 402 521126 - 521079 - g 70 -8.4 -3.74178 | opp_overlap 521111, overlap 521104 GAAGGAAACTGGAAA TTCTTGCTGGATAGCATCAGCC AAAT GCCTGCCGCCATGCAGCAGGAA GATGTCTGGCGTTAC TERM 403 521126 - 521104 - g 77 -9.8 -3.6959 | opp_overlap 521111, overlap 521079 ATAGCATCAGCCAAA TGCCTGCCGC CAT GCAGCAGGAA GATGTCTGGCGTTAC Neut_0502 520128 - 522035 + | lytic transglycosylase, catalytic TERM 404 522235 - 522214 - g 72 -10.1 -3.42257 | CCTGAAACACACGAA CAGTACGCG CTGG CGCGGACTG AACGAAAAATCGCTC TERM 405 522453 - 522477 + G 77 -9.2 -4.06502 | TCCCGTGAGAGTGCT GCGGGTTGCA CGGTT TGCTGCCCGC TTTGGTTTCCAGGTC cca 522046 - 523284 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase Neut_0504 524983 - 523259 - | ABC transporter-related protein TERM 406 523888 - 523911 + g 74 -4.7 -4.90266 | AATGAACTGGTATTT CTATATTCA AATCAC TGAATATGG TTTTTCGTTCATAGC Neut_0505 525838 - 525002 - | diaminopimelate epimerase TERM 407 525999 - 525979 - H 70 -2.5 -4.9218 | overlap 525982 TATTGAGCACAAAAA TATCAGAGC CTG GCTGTGGTA ATGGGGGATACACTT Neut_0506 526241 - 526678 + | general secretion pathway protein G Neut_0507 526697 - 527881 + | type II secretion system protein Neut_0508 527878 - 529572 + | type II secretion system protein E Neut_0509 529553 - 530398 + | hypothetical protein Neut_0510 530391 - 530927 + | fimbrial assembly family protein Neut_0511 530909 - 531466 + | putative transmembrane protein Neut_0512 531582 - 532127 + | putative prolin-rich transmembrane protein TERM 408 532342 - 532376 + G 70 -4.9 -4.63218 | GGAAGTGAGTGCGAC TCTGGCCAGAGAACG TGATT CCATCATTGGCCAGA TTTTATTCGAGGCAG Neut_0513 532148 - 534451 + | type II and III secretion system protein Neut_0514 534472 - 534975 + | general secretion pathway transmembrane protein Neut_0515 534985 - 535440 + | type II secretion system protein G Neut_0516 535440 - 535976 + | putative transmembrane protein Neut_0517 536204 - 537913 + | TPR repeat-containing protein Neut_0518 540005 - 537942 - | von Willebrand factor, type A TERM 409 539747 - 539759 + g 80 -4.7 -5.15167 | opp_overlap 539747 GTTCCGGGCCAAGTA CCGCC AAC GGCAG TTTTTCTTGGTGATG Neut_0519 540802 - 540011 - | ATPase TERM 410 540661 - 540637 - G 88 -10.6 -4.1413 | overlap 540638 AAGAGATCGTGAAAA GCGGCCGCCC CAGTC GGGCGGCCAT GTGAGTAACAAACCG TERM 411 540660 - 540638 - G 86 -14.1 -3.07755 | overlap 540637 AGAGATCGTGAAAAG CGGCCGCCC CAGTC GGGCGGCCA TGTGAGTAACAAACC Neut_0520 542180 - 540834 - | cytochrome c oxidase, subunit I TERM 412 541325 - 541291 - G 80 -4.3 -5.08824 | gap 1 CCGGCACCGAAAAAA GCCAT-CACCGGAC AGCCTAAG GTCCAGAGCATGGC GGCCTTATTGGGATG Neut_0521 542669 - 542217 - | nitric-oxide reductase Neut_0522 544826 - 542901 - | K+ potassium transporter Neut_0524 546177 - 545743 - | hypothetical protein Neut_0525 548367 - 546247 - | diguanylate cyclase/phosphodiesterase TERM 413 547153 - 547165 + g 77 -10.5 -3.64685 | TTTTGCTTCGTACAT CGCGG CAT CCGCG TTCTTCAGCAGTTTT Neut_0526 549043 - 550224 + | hypothetical protein Neut_0527 550983 - 550366 - | methionine biosynthesis protein MetW metX 552147 - 551014 - | homoserine O-acetyltransferase Neut_0529 553973 - 552246 - | phosphoenolpyruvate-protein phosphotransferase TERM 414 552475 - 552464 - G 74 -7.2 -4.12532 | opp_overlap 552463 552464 CTCCGCAGATAGAAA CCGG TATG CCGG CTTTTGTCGCACTCT TERM 415 552847 - 552830 - G 74 -8.4 -4.11484 | TTGAAGCGCGCAAAA TGGCGC GCAGTT GCGCCA GAAACATGCCTGGTT TERM 416 553211 - 553224 + g 79 -8.1 -4.4078 | AGAGTTTGCGTTTCT CCAGC TCAA GCTGG TTTTGCTTCAGACGA Neut_0530 554239 - 553970 - | phosphocarrier, HPr family protein TERM 417 554083 - 554103 + g 74 -7.6 -4.24002 | overlap 554101 CCTTGCTGGCGGCAA GCGTCATG ACACC CATGATGC TTTTGGCATTTACCC Neut_0531 554633 - 554229 - | PTS system fructose subfamily IIA component TERM 418 554615 - 554632 + g 70 -4.9 -4.62168 | gap 1, opp_overlap 554601 ACTGCTCATGACTGA TGATCAGG ATT CC-GATCA TTTTGTGATTTACCT TERM 419 555989 - 555999 + G 79 -6.8 -4.61231 | CGGTTATTTATTTGC CCAG GCA CTGG TTTTTCGCAGTCTGC Neut_0532 554982 - 556019 + | phosphoesterase, PA-phosphatase-related protein Neut_0533 556584 - 556345 - | hypothetical protein TERM 420 557372 - 557391 + G 74 -8.6 -4.07568 | gap 1, opp_overlap 557371 557375 557382 TATGGTTTTACCAAT GCACAGGCA AGC TGCCTG-GC TTTTCAGGCAGGAGG Neut_0534 556619 - 557626 + | lipolytic enzyme, G-D-S-L family protein Neut_0535 558237 - 557692 - | N-acetyl-anhydromuranmyl-L-alanine amidase Neut_0536 558327 - 558974 + | dTMP kinase Neut_0537 562328 - 559110 - | type I site-specific deoxyribonuclease, HsdR family protein TERM 421 560505 - 560526 + g 76 -11.6 -3.25719 | GGCGTTGTCATCGTT GCTGTGCC AGTCGG GGCACAGC TTGATGATCTGGTCA TERM 422 560905 - 560882 - G 70 -10.2 -3.02511 | opp_overlap 560880 560881 TGTAGTGGCCGAACA CCGCCGGCGT GTTC ACATCGGCGG CTTCGATGGGCGTAC TERM 423 561525 - 561491 - G 71 -7.8 -3.97368 | opp_overlap 561520 CCCGTAACGTAGAAA CTACCGCCTTCTTCAC CGC GTGAAACTGGTGGTAG CCGGCGATGATCTTG TERM 424 561950 - 561936 - G 80 -10 -3.99324 | opp_overlap 561936 561934 GTTGATTACCACAAA CTGGCT CAC AGCCAG CCAGTCGTTTTGTTC Neut_0538 563391 - 562483 - | hypothetical protein TERM 425 562642 - 562654 + g 82 -7.7 -4.66609 | GACGTCAACGCCCGT GCTCT TGC AGAGC TTTTTGAGTGAGGTC TERM 426 563009 - 563029 + g 91 -14.7 -3.45023 | CCCTTGAACTGGGTC GCTCGCCGC AAG GCGGTGAGC TTGTGCTGCTCGTCG Neut_0539 563960 - 563388 - | hypothetical protein Neut_0540 565225 - 563957 - | restriction modification system DNA specificity subunit Neut_0541 566843 - 565215 - | N-6 DNA methylase TERM 427 565279 - 565315 + g 86 -14.4 -3.21276 | gap 1, overlap 565277 AGCCGCGCCGCTTCC TGCTGCTGCTC-GCGCC ACTG GGCGCTGAGCCGCTGCA TCTTGTCGGCAAAGG Neut_0542 568477 - 567050 - | Na+/H+ antiporter NhaC TERM 428 567960 - 567940 - G 77 -10.5 -3.53012 | opp_overlap 567939 TGGTGGTGTCGGAAA TCGGTGACA GCT TGTCACCAA ATGTTGCGCCGGAGA TERM 429 568662 - 568680 + H 80 -6 -4.80736 | overlap 568663 TCGCGCTAAACTGCA ATGCCTTT ATT AAAGGCAG TTTCTTTATTTAATG TERM 430 568663 - 568679 + H 75 -9.5 -3.46815 | overlap 568662 CGCGCTAAACTGCAA TGCCTTT ATT AAAGGCA GTTTCTTTATTTAAT Neut_0543 568731 - 569795 + | DNA polymerase III, delta prime subunit Neut_0544 570290 - 569799 - | hypothetical protein TERM 431 570842 - 570865 + G 82 -12.4 -3.61062 | CACACGATTGCCGGG CGCCTGCTGC CAGC GCAGCAGACG TTATCTGGTTGCATT Neut_0545 570754 - 571755 + | magnesium and cobalt transport protein CorA Neut_0547 572106 - 572219 + | hypothetical protein Neut_0548 572464 - 573615 + | hypothetical protein Neut_0549 573647 - 573886 + | zinc finger CDGSH-type domain-containing protein Neut_0550 574014 - 574559 + | hypothetical protein Neut_0551 574714 - 575034 + | transposase and inactivated derivatives TERM 432 575399 - 575373 - f 100 -12.4 -3.89215 | opp_overlap 575372 575371 575375 TTTGATAAATTCAAA CATAACCACGAA AGC CTCGTGGCTATG GGTTTGTACCTTCCT rpsL 575692 - 576069 + | 30S ribosomal protein S12 Neut_0554 576135 - 576605 + | 30S ribosomal protein S7 Neut_0555 576676 - 578766 + | elongation factor G Neut_0556 578796 - 579986 + | elongation factor Tu rpsJ 580067 - 580375 + | 30S ribosomal protein S10 Neut_0558 580424 - 581077 + | ribosomal protein L3 TERM 433 581514 - 581501 - g 74 -3.9 -4.95155 | TCGAGACTACAAAAA CAAAA TTTT TTTTG CAGAAATTAAAAAAT rplD 581095 - 581715 + | 50S ribosomal protein L4 Neut_0560 581712 - 582047 + | ribosomal protein L25/L23 rplB 582047 - 582880 + | 50S ribosomal protein L2 rpsS 582885 - 583169 + | 30S ribosomal protein S19 Neut_0563 583178 - 583510 + | ribosomal protein L22 TERM 434 583579 - 583562 - g 73 -2.7 -5.02074 | overlap 583576 TCATGGGTCAAAAAA TTAATCC GACA GGATTTA GACTTTCAGTTCTAA rpsC 583549 - 584196 + | 30S ribosomal protein S3 rplP 584281 - 584697 + | 50S ribosomal protein L16 TERM 435 585054 - 585030 - g 100 -6.5 -5.40474 | overlap 585032 ACTCGTTCAAAAAAA TATCATGCTCA CGA TGAGCATAATC AATATAAAGTGGGCG TERM 436 585052 - 585032 - g 83 -9.1 -4.34482 | overlap 585030 TCGTTCAAAAAAATA TCATGCTCA CGA TGAGCATAA TCAATATAAAGTGGG TERM 437 585119 - 585109 - g 76 -5.4 -4.8048 | GCCCTATATCAAAAA CCAA ATC TTGG CGAGTAATCAAGGTA Neut_0567 584895 - 585149 + | ribosomal protein S17 Neut_0568 585228 - 585596 + | ribosomal protein L14 Neut_0569 585609 - 585932 + | ribosomal protein L24 rplE 585948 - 586487 + | 50S ribosomal protein L5 Neut_0571 586497 - 586802 + | ribosomal protein S14 Neut_0572 586876 - 587271 + | ribosomal protein S8 rplF 587284 - 587823 + | 50S ribosomal protein L6 Neut_0574 587839 - 588201 + | ribosomal protein L18 rpsE 588218 - 588751 + | 30S ribosomal protein S5 Neut_0576 588757 - 588942 + | ribosomal protein L30 Neut_0577 588945 - 589406 + | ribosomal protein L15 TERM 438 589668 - 589686 + G 80 -11.8 -3.42373 | opp_overlap 589666, overlap 589667 589682 TATTATTATGCAACT TGGAACAG TAG CTGTTCCA TATTTGGAATCTTTG TERM 439 590560 - 590571 + G 80 -4.4 -5.07652 | opp_overlap 590560, overlap 590555 TTTATGATTTTGAAA TGGA ATGT TCCA TTTTATTTTGGAGGA secY 589396 - 590718 + | preprotein translocase subunit SecY infA 590729 - 590947 + | translation initiation factor IF-1 rpsM 591134 - 591493 + | 30S ribosomal protein S13 Neut_0581 591533 - 591922 + | 30S ribosomal protein S11 TERM 440 591945 - 591934 - f 71 -4.4 -4.61747 | CTAAGAAGGAGAAAA TCTG TGGC CAGA AATATAAACCCAAAG rpsD 591937 - 592563 + | 30S ribosomal protein S4 Neut_0583 592590 - 593597 + | DNA-directed RNA polymerase subunit alpha Neut_0584 593584 - 593976 + | ribosomal protein L17 TERM 441 594013 - 594025 + T 87 -4.9 -5.32699 | CTGTTTTTGAAGCTG TAGAT TTT ATCTA TTTTTTCATATTTAA Neut_0585 594614 - 594297 - | hypothetical protein Neut_0586 595041 - 594598 - | cyclase/dehydrase smpB 595146 - 595595 + | SsrA-binding protein TERM 442 595808 - 595778 - g 93 -15.6 -3.17392 | opp_overlap 595785, overlap 595783 GATCGTTGAATGGAA GCCAATAGTTGGAA CGA TTCCACCTATTGGC CAGGAAGATTGGGAA Neut_0588 595605 - 596675 + | cytochrome oxidase assembly Neut_0589 596764 - 597183 + | RDD domain-containing protein TERM 443 598906 - 598896 - g 71 -5.4 -4.57073 | CATCTGCTGGAAAAA TCCT ATC AGGA CAAGTTGAAATTTCA Neut_0590 597546 - 599129 + | DNA polymerase III, subunits gamma and tau Neut_0591 599146 - 599469 + | hypothetical protein Neut_0592 599523 - 600341 + | pseudouridine synthase, Rsu Neut_0593 601291 - 600371 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 444 601102 - 601090 - G 70 -3.4 -4.87665 | TGGCATCCATAAAAA GATC CAGCT GATC AGCGTTCAGATACAG Neut_0594 601339 - 601842 + | CMP/dCMP deaminase, zinc-binding Neut_0595 601839 - 602318 + | ErfK/YbiS/YcfS/YnhG family protein Neut_0596 602380 - 603990 + | malate dehydrogenase TERM 445 604006 - 604032 + T 74 -10.9 -2.73701 | opp_overlap 603993, overlap 604005 AACAGGAGTGGTGTC CCCCTGCCTTA CGGTA TAAAGCAGGGG ATTGATTTACTCAAA Neut_0597 604869 - 604039 - | phosphoserine phosphatase SerB TERM 446 604409 - 604424 + g 74 -4 -5.00616 | gap 1, overlap 604408 TTAATACCAGCGGAT TGCATGC GTT GCA-GCA TTTTTTCAGCCCCCA Neut_0598 606432 - 604957 - | diguanylate cyclase Neut_0599 606689 - 608182 + | leucyl aminopeptidase TERM 447 608427 - 608409 - g 71 -7.4 -4.02334 | CAGGCAGATGACAAA CTGGCG GGGGTGA CGCCAG TGATCCTGAATAATC Neut_0600 608214 - 608642 + | DNA polymerase III chi subunit, HolC Neut_0601 608715 - 609116 + | hypothetical protein TERM 448 609443 - 609406 - g 70 -11.3 -2.50074 | gap 1, opp_overlap 609403 609402, overlap 609405 609403 TGGGTGACAACACAT TGTGGCAA-CCGGGCACG GAT CATGCCGGGATTGCCACG CAGATTGTGGTTGAA TERM 449 609868 - 609907 + G 74 -12.2 -2.78816 | gap 1 CTATGCTGGGTGATG TGGCGGTGGCAGTACACCC GGA GGATGTAC-GCTACCGGCA TCTGATCGGACATCA TERM 450 610521 - 610511 - g 74 -6.8 -4.4078 | GTCTGGTAAGGAAAA CCTG CAT CAGG ATGAAGATGTACTGG valS 609180 - 611933 + | valyl-tRNA synthetase TERM 451 613063 - 613047 - g 76 -5.1 -4.89729 | CAGAAAATGCAAAAA CACTGGT TGA AACAGTG CATATGCAAAGCGTT Neut_0603 612029 - 613099 + | uroporphyrinogen decarboxylase TERM 452 613116 - 613140 + T 91 -7.9 -5.22006 | overlap 613117 TTTTAGTATGAGCAG CGGGTTATCAG AAA TTGATAACCCA TTTTTGTTGTAATCG TERM 453 613117 - 613139 + T 91 -11.4 -3.72119 | overlap 613116 TTTAGTATGAGCAGC GGGTTATCAG AAA TTGATAACCC ATTTTTGTTGTAATC Neut_0604 614060 - 613254 - | hypothetical protein TERM 454 614161 - 614173 + r 70 -2.7 -4.93877 | ATTTTAATAACAAGA TCATT ATT GATGA TTTTCTTTACTCGGG Neut_0605 615097 - 614210 - | succinyl-CoA synthetase subunit alpha sucC 616299 - 615127 - | succinyl-CoA synthetase subunit beta Neut_0607 617423 - 616473 - | Citryl-CoA lyase TERM 455 616564 - 616592 + g 71 -7.4 -4.0825 | overlap 616562 616561 AGCTTGCCATCCAGT GCTGCTGCAC CTTTTCCTT GAGCAGCAGC TTCTTTCATTGCCGC Neut_0608 619182 - 617674 - | glycogen/starch synthases, ADP-glucose type TERM 456 618770 - 618788 + g 74 -4.4 -4.77036 | overlap 618771 AGCGGACTGGCATCA CTGGCGAG AAG CGCGCCAA TTTTTGATAATAAGC Neut_0609 620837 - 619203 - | glucose-6-phosphate isomerase TERM 457 619255 - 619265 + g 74 -8.2 -4.03234 | GTTGATGCATCGTGC CCGG TTA CCGG TTTATCTGCAGCCAA TERM 458 619452 - 619436 - G 73 -5.1 -4.63218 | opp_overlap 619436 GTTTTTTGAACAAAA TCGAGGT GGT AGCTCGA TTGCCTGGAAACACG TERM 459 620193 - 620175 - G 86 -8.9 -4.56597 | opp_overlap 620162 TCCGCTGGCCAAAAA CCATTCC CGCGC GGAATGG GCGTTGGTGAGTGTT TERM 460 620930 - 620883 - R 72 -5.6 -4.58663 | gap 1, overlap 620884 AGTATTTTTCAAAAA TTGCAGCGATT-CCCTGTCCACC ACC GATGCACAGGGTAACCAGTGCAT GGCGGCCATTTATGC TERM 461 620929 - 620884 - R 71 -9.1 -3.34716 | gap 1, overlap 620883 GTATTTTTCAAAAAT TGCAGCGATT-CCCTGTCCACC ACC GATGCACAGGGTAACCAGTGCA TGGCGGCCATTTATG Neut_0610 622044 - 620866 - | beta-ketothiolase TERM 462 620935 - 620964 + g 90 -13.7 -3.80014 | AACCAGTGCATGGCG GCCATTTATGCGC TGCA GCTCATAAATGGC TTTGATCGTCAGTAT TERM 463 621992 - 622010 + g 77 -9.6 -3.79906 | TCCTTCAGTGCGCTG CCGTAATC ACC GATTGCGG TTCTTGTGCCACTCA hslU 623385 - 622054 - | ATP-dependent protease ATP-binding subunit TERM 464 622732 - 622750 + g 83 -5.2 -5.1356 | overlap 622736 TTTTCTGGCTTCACG GATACGCA ACT TGCGTGAC TTTTTCTTGCTGGCA Neut_0612 623941 - 623420 - | ATP-dependent protease peptidase subunit Neut_0613 624353 - 624150 - | DNA-directed RNA polymerase, omega subunit TERM 465 624390 - 624375 - R 75 -4.8 -4.74801 | TAACTCCAGTAAAAA TTTACA AAAA TGTAAA AACGTAAGGCTGATC Neut_0614 625009 - 624404 - | guanylate kinase ntpA 625768 - 625286 - | dATP pyrophosphohydrolase aspS 627563 - 625782 - | aspartyl-tRNA synthetase TERM 466 627643 - 627623 - R 72 -5.4 -4.56597 | overlap 627624 CTTGCTGTGTAAAAA TCCTGCTA GTCTG TAGCAGGC GCAGACGGCACGGTG TERM 467 627642 - 627624 - R 71 -8.9 -3.33744 | overlap 627623 TTGCTGTGTAAAAAT CCTGCTA GTCTG TAGCAGG CGCAGACGGCACGGT Neut_0617 627945 - 627628 - | putative regulatory protein, FmdB family protein Neut_0618 629509 - 628058 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 468 628374 - 628393 + g 70 -8.6 -3.68378 | gap 1, overlap 628372 GTATCGATCGAATCG TACCAGCCC CAC GGGC-GGTA TATTTTGCGATGTGA TERM 469 628587 - 628562 - G 90 -14.9 -3.29511 | opp_overlap 628569, overlap 628569 TCGATGCTCGGAGAA TGCAAGAGTGT TATA ACACTCTTGCA ATAACACATCGCCGC Neut_0619 630685 - 629573 - | UDP-N-acetylglucosamine 2-epimerase TERM 470 631278 - 631290 + G 70 -3.3 -4.83169 | AGGAAGATATCACAC GCCTG ATC CACGC TTTTTATACCCGGGT Neut_0620 631238 - 631642 + | hypothetical protein TERM 471 632013 - 632043 + G 80 -9.6 -4.06419 | overlap 632014 632032 TGTGAGCTGCTGTTT TTCGGCATAGCGGC ACT GGCGCTGGGCCGAG TTATTTATCAAAAAC TERM 472 632014 - 632042 + G 71 -10.9 -3.0353 | overlap 632013 632032 GTGAGCTGCTGTTTT TCGGCATAGCGGC ACT GGCGCTGGGCCGA GTTATTTATCAAAAA Neut_0621 631635 - 632858 + | NnrS family protein Neut_0622 632899 - 633339 + | hypothetical protein Neut_0623 633450 - 633935 + | nucleotide-binding protein Neut_0624 635489 - 634044 - | phosphate-selective porin O and P TERM 473 635706 - 635746 + r 70 -9 -3.21218 | gap 1, opp_overlap 635708, overlap 635707 TCTGAATCCGGACAG GATTCCTGCAGCCGGGCGG GAGA TCGCCTGG-TGCAGGAAGA TTAATGCTGAAGGAT TERM 474 635707 - 635745 + r 81 -12.5 -2.52516 | gap 1, opp_overlap 635708, overlap 635706 CTGAATCCGGACAGG ATTCCTGCAGCCGGGCGG GAGA TCGCCTGG-TGCAGGAAG ATTAATGCTGAAGGA TERM 475 635744 - 635708 - R 84 -13.1 -2.63631 | gap 1, opp_overlap 635707 635706 TGAATCCGGACAGGA TTCCTGCAGCCGGGCG GGAGAT CGCCTGG-TGCAGGAA GATTAATGCTGAAGG Neut_0625 636770 - 635826 - | integrase catalytic subunit TERM 476 636341 - 636326 - G 74 -2.5 -5.08601 | GGAGTTGAACAAAAA CGAAC TTTGAT GTCCG GTCAATGGCTACAAA Neut_0626 637661 - 636894 - | hypothetical protein Neut_0627 638550 - 637777 - | hypothetical protein TERM 477 638442 - 638453 + g 78 -5.8 -4.76644 | CCAGTATACTTTGGG CCGA AATA TCGG TTTTTACTGCATCTT Neut_0628 638562 - 639278 + | ABC transporter-related protein TERM 478 639993 - 640007 + G 86 -7.1 -4.91712 | TCTGGATGAAATTGG TCGGC CTGGA GCCGA TTTTTATCCATTCAA Neut_0629 639271 - 640719 + | hypothetical protein Neut_0630 642215 - 641004 - | hypothetical protein Neut_0631 642953 - 643879 + | integrase catalytic subunit Neut_0632 643911 - 644138 + | prevent-host-death family protein Neut_0633 644176 - 644439 + | hypothetical protein Neut_0634 645897 - 644644 - | hypothetical protein Neut_0635 646072 - 647667 + | FAD linked oxidase domain-containing protein Neut_0636 647852 - 648769 + | PEP motif-containing protein TERM 479 648819 - 648800 - T 74 -3.4 -5.1675 | opp_overlap 648789 648800, overlap 648802 CGATGTAGTAAAAAA GGGGGGGT CAAT ACCCTCTC TTTTTTATTGGGTAT TERM 480 648800 - 648819 + T 100 -7.8 -5.49234 | opp_overlap 648800 648802, overlap 648789 CGATGTAGTAAAAAA GGGGGGGT CAAT ACCCTCTC TTTTTTATTGGGTAT Neut_0637 649807 - 648824 - | fatty acid desaturase Neut_0638 650883 - 649984 - | putative long-chain N-acyl amino acid synthase Neut_0639 651458 - 651601 + | hypothetical protein Neut_0640 651619 - 651798 + | hypothetical protein Neut_0641 651782 - 651904 + | hypothetical protein TERM 481 652223 - 652238 + F 77 -9 -3.72453 | TGTACAACTTCTTTT TACCCG GATC CGGGTA TTTCAAATTCTTGAT Neut_0642 652289 - 653851 + | integral membrane protein TerC TERM 482 654284 - 654298 + F 78 -8.6 -4.07568 | TTCGCGGTATACACC TTGCGA TCA TCGCAA TTTTACCAGCAGCGC Neut_0643 654368 - 655270 + | lytic transglycosylase, catalytic Neut_0644 656108 - 655449 - | endonuclease III Neut_0645 656761 - 656105 - | electron transport complex, RnfABCDGE type, B subunit Neut_0646 657779 - 656751 - | dihydroorotate dehydrogenase 2 TERM 483 656857 - 656837 - G 79 -8.9 -4.183 | opp_overlap 656837 656847 TTAATCCGGAATAAA CCTGCACCA GGC TGGCGCCGG CTTTTATTTTGGCTT TERM 484 656847 - 656858 + g 78 -3.6 -5.13343 | opp_overlap 656837, overlap 656837 ATAAACCTGCACCAG GCTG GCGC CGGC TTTTATTTTGGCTTG Neut_0647 658493 - 657780 - | arginyl-tRNA-protein transferase aat 659197 - 658493 - | leucyl/phenylalanyl-tRNA--protein transferase Neut_0649 659526 - 659278 - | hypothetical protein Neut_0650 659602 - 660483 + | hypothetical protein TERM 485 660630 - 660651 + T 100 -11.5 -5.65177 | GACGAAGCCTTTATA CCCCGCCTA AGTT TTGGCGGGG TTTTTTTATGAGTGT Neut_0651 662048 - 660666 - | UDP-N-acetylmuramate Neut_0652 662173 - 663345 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Neut_0653 664307 - 663369 - | hypothetical protein TERM 486 664160 - 664174 + g 90 -10 -4.45168 | opp_overlap 664162 GTGCCAGTGCCTGAA CAGGAG ATT CTCCTG TTTCTATTTTCCCCC Neut_0654 665213 - 664320 - | hypothetical protein argJ 666423 - 665194 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 487 666006 - 666032 + g 78 -2.2 -5.24129 | overlap 666007 666009 CCGGAACCAGGTTTG CCACTGCCTG GGGCAGG CAGGCAGTAA TTTTTTCTACCGGCA Neut_0656 666516 - 666998 + | rhodanese domain-containing protein Neut_0657 666998 - 667285 + | glutaredoxin 3 Neut_0658 667360 - 667842 + | preprotein translocase subunit SecB Neut_0659 667846 - 668325 + | hypothetical protein gpsA 668322 - 669311 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase Neut_0661 669498 - 669770 + | histone family protein DNA-binding protein Neut_0662 670110 - 672002 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 488 672040 - 672009 - T 100 -21.8 -3.83226 | opp_overlap 671998 AATGACTGATAAGAA GAGCAGTAGTAGCC TGCA GGCTACTACTGCTC ATCAGTGTCCAGATT Neut_0663 672826 - 672032 - | short-chain dehydrogenase/reductase SDR TERM 489 673278 - 673291 + G 71 -5.9 -4.3739 | GCCTTGCTGGATGAT GGCGC AACC GTGCC TTTTATCGCGCGATA TERM 490 675242 - 675267 + G 85 -11.9 -3.76224 | ATTTGTTGATATTGG CGTGCATCAGG ATGG TCTGGTGCACG TTTCCTCACTGGCAA Neut_0664 673155 - 675377 + | RNA-binding S1 domain-containing protein Neut_0665 675619 - 675395 - | hypothetical protein Neut_0666 676353 - 675616 - | resolvase domain-containing protein TERM 491 676648 - 676613 - g 91 -10.4 -4.56597 | gap 1, opp_overlap 676616 676621 676622, overlap 676614 676616 TGGCCGCCGGAAAAA TCAGCGAAG-CGGCCGG CAT CCCGCCGTCTTCGCTAT CCTTCCACCTGAAAG TERM 492 676647 - 676614 - g 83 -13.9 -3.33744 | gap 1, opp_overlap 676616 676621 676622, overlap 676613 676616 GGCCGCCGGAAAAAT CAGCGAAG-CGGCCGG CAT CCCGCCGTCTTCGCTA TCCTTCCACCTGAAA TERM 493 676616 - 676645 + G 83 -14.3 -2.90723 | gap 1, opp_overlap 676616 676614 676613, overlap 676621 676622 CCGCCGGAAAAATCA GCGAAG-CGGCCGG CAT CCCGCCGTCTTCGC TATCCTTCCACCTGA TERM 494 676645 - 676616 - g 86 -14.3 -3.23708 | gap 1, opp_overlap 676616 676621 676622, overlap 676614 676613 CCGCCGGAAAAATCA GCGAAG-CGGCCGG CAT CCCGCCGTCTTCGC TATCCTTCCACCTGA TERM 495 676737 - 676755 + G 84 -11 -3.85698 | GGCGAACTTTTCGAC GGCCACTA ACC TGGTGGCC TTTCTCACGGAAAAC Neut_0667 676501 - 676833 + | transcriptional regulator, ArsR family protein TERM 496 677231 - 677215 - g 70 -9.3 -3.53091 | overlap 677216 ATCTGCCGCTTGAAA TGGCCGG CAT CCGGCCG ACCCAAGGCCGCACC TERM 497 677230 - 677216 - g 77 -12.8 -2.71712 | overlap 677215 TCTGCCGCTTGAAAT GGCCGG CAT CCGGCC GACCCAAGGCCGCAC TERM 498 677490 - 677442 - g 73 -8.9 -3.68073 | GATGTGATGGAAGAA CTG-GTGCGCTTCACGGCGCTGG TACGG CC-GCACCGTGAAGCACTGACAG ACCGCTATTCCGAAC TERM 499 677542 - 677511 - g 70 -8.6 -3.75629 | gap 1, opp_overlap 677509 677511 677512, overlap 677492 677512 TATTCCGAACGGAAA GCGGCCGGCCACGTC ATC GACGAGGCCA-CCGA TCTTTCATCCATCGC TERM 500 677541 - 677512 - g 74 -12.1 -2.85056 | gap 1, opp_overlap 677511 677509 677512, overlap 677492 677511 ATTCCGAACGGAAAG CGGCCGGCCACGTC ATC GACGAGGCCA-CCG ATCTTTCATCCATCG Neut_0668 676830 - 677597 + | NADPH-dependent FMN reductase Neut_0669 677594 - 678100 + | protein tyrosine phosphatase Neut_0670 678097 - 679164 + | bile acid:sodium symporter TERM 501 679332 - 679320 - T 76 -10.5 -3.4072 | opp_overlap 679328 CAGGCTGCATGAGAA GGCCG ACC CGGCC CGCGCCGTTTCCACT TERM 502 679486 - 679510 + T 79 -9.9 -3.84961 | opp_overlap 679487, overlap 679487 AGTGAAGATTGAAAA AGGCGGCCAGT TCG AGTGGCCGCCC TTTCGTCATTAGCTG TERM 503 679509 - 679487 - T 100 -13.4 -4.74706 | opp_overlap 679486 679487 GTGAAGATTGAAAAA GGCGGCCAGT TCG AGTGGCCGCC CTTTCGTCATTAGCT TERM 504 679487 - 679509 + T 86 -13.4 -2.90494 | opp_overlap 679487, overlap 679486 GTGAAGATTGAAAAA GGCGGCCAGT TCG AGTGGCCGCC CTTTCGTCATTAGCT Neut_0671 679743 - 679519 - | hypothetical protein TERM 505 679804 - 679775 - R 83 -10.6 -3.64822 | AGGTGTTGATTGAAA GTGCCGGGCTGG TTGTGG CCAGCCCGGTGC GCCTACAGGTACAGC Neut_0672 680055 - 679807 - | hypothetical protein TERM 506 680013 - 680042 + g 79 -12.1 -3.30443 | CTTCCCTTGGCGCTT CATCCAGGGCCGC CAAT GCGGCCATGTATG TTGATGTCGTCATCG Neut_0673 681487 - 680060 - | TrbL/VirB6 plasmid conjugal transfer protein Neut_0674 681734 - 681498 - | hypothetical protein Neut_0675 682526 - 681747 - | putative mating pair formation protein Neut_0676 682855 - 682667 - | putative stabilization protein TERM 507 683045 - 682993 - R 78 -10 -3.61398 | gap 1, opp_overlap 683008 683013, overlap 682994 683006 683013 CCCCGGCGCGAATAA GGGAC-AGTGAAGATAGATAACCGG CTTG CCGGTTAGCTAACTTCACCCATCCT GCCCGCATTTCACCC TERM 508 683044 - 682994 - R 86 -13.5 -2.76696 | gap 1, opp_overlap 683008 683013, overlap 682993 683006 683013 CCCGGCGCGAATAAG GGAC-AGTGAAGATAGATAACCGG CTTG CCGGTTAGCTAACTTCACCCATCC TGCCCGCATTTCACC TERM 509 683031 - 683006 - R 74 -10.5 -3.13071 | opp_overlap 683008 683013, overlap 682994 682993 683013 AAGGGACAGTGAAGA TAGATAACCGG CTTG CCGGTTAGCTA ACTTCACCCATCCTG TERM 510 683261 - 683237 - R 81 -9.9 -4.10781 | overlap 683240 AACAATCGACACAAA CCATTCGCCCC GAT GGGGCGAGTTG GACGCCAAAAAAGAA TERM 511 683258 - 683240 - R 73 -10.2 -3.07534 | overlap 683237 AATCGACACAAACCA TTCGCCCC GAT GGGGCGAG TTGGACGCCAAAAAA TERM 512 683294 - 683274 - R 84 -6.8 -5.0538 | TTGGACGCCAAAAAA GAAGGGCA TAACC CGCCCCTC AAGTGTCAATGAACA TERM 513 683481 - 683453 - R 75 -9.2 -3.61398 | opp_overlap 683453 683450, overlap 683456 683459 CCTGCTTGGTAATAA TAAGAATAATAA TCTTC TTATTATTCTTA CCGAACGAATGGGCA TERM 514 683705 - 683685 - R 81 -11.1 -3.53012 | opp_overlap 683688, overlap 683688 CTTCTTGGCGTTAAA CCATCGGCC TAT GGCCGATTG ATAAAGCCCGCCAGG TERM 515 683688 - 683702 + r 81 -11.4 -3.14132 | opp_overlap 683688 683685 CTTGGCGTTAAACCA TCGGCC TAT GGCCGA TTGATAAAGCCCGCC TERM 516 683702 - 683688 - R 78 -11.4 -2.90496 | opp_overlap 683688, overlap 683685 CTTGGCGTTAAACCA TCGGCC TAT GGCCGA TTGATAAAGCCCGCC TERM 517 683722 - 683711 - R 70 -7.2 -3.91897 | opp_overlap 683711 TGGCCGATTGATAAA GCCC GCCA GGGC TTTATTGGCAAGGTC TERM 518 683711 - 683722 + r 74 -7.2 -4.1552 | opp_overlap 683711 TGGCCGATTGATAAA GCCC GCCA GGGC TTTATTGGCAAGGTC TERM 519 683758 - 683742 - R 83 -11.5 -3.36492 | TTGGCAAGGTCAGAA CGCGCCC TCA AGGCGCG AGCTGCACCGCGCAT Neut_0677 684769 - 683888 - | replication C family protein Neut_0678 685583 - 684756 - | putative DNA helicase TERM 520 685607 - 685588 - R 77 -10 -3.5518 | TCAAGAGCCATATAA CTAGCCCT CTAT AGGGCCAG GTCGCGCAGCTTGAT Neut_0679 685809 - 685588 - | phage transcriptional regulator, AlpA Neut_0680 687159 - 685957 - | phage integrase family protein TERM 521 687415 - 687398 - H 100 -10.5 -6.28967 | CACAAACAAAAAAAA GCCCGCA ATTA CGCGGGC TTAGCGGCATTTCAT Neut_0681 687429 - 687740 + | S1 RNA-binding domain-containing protein Neut_0682 687751 - 688557 + | methyltransferase type 11 Neut_0683 688554 - 689006 + | hypothetical protein Neut_0684 689960 - 689148 - | N-hydroxyarylamine O-acetyltransferase Neut_0685 690982 - 690068 - | hypothetical protein Neut_0686 692353 - 691070 - | TRAP dicarboxylate transporter, DctM subunit TERM 522 691424 - 691397 - G 82 -12.8 -3.48036 | opp_overlap 691392, overlap 691398 CATCAGCAGAATGAA TCCCCATTTACC GCCT GGTAAATGGGGC AACAGTAGTTCGGCC TERM 523 691423 - 691398 - G 91 -16.3 -2.6834 | opp_overlap 691392, overlap 691397 ATCAGCAGAATGAAT CCCCATTTACC GCCT GGTAAATGGGG CAACAGTAGTTCGGC Neut_0687 692990 - 692436 - | tripartite ATP-independent periplasmic transporter DctQ Neut_0688 694429 - 693065 - | peptidase U62, modulator of DNA gyrase Neut_0689 694675 - 695205 + | hypothetical protein Neut_0690 695365 - 695748 + | hypothetical protein TERM 524 695922 - 695904 - g 75 -10.3 -3.34104 | GCAGAATGATATTAA CGGTGTG ATGCG CACACCG GATGGCTATAGTGGT TERM 525 696263 - 696279 + G 71 -5.1 -4.56597 | opp_overlap 696252, overlap 696264 AAAACTGGCGTTCCA ACCAGAA AAA TTCTGGA TTTTTACCGGAAGAA Neut_0691 695773 - 696546 + | exodeoxyribonuclease III Xth TERM 526 696801 - 696827 + G 70 -2.9 -4.84017 | gap 1, overlap 696803 696824 CCGCTGCTCACTCGC TGGCTGGGACGC CGCC GCG-CCTGGCTG TTTTTGTCACAGCTT TERM 527 697063 - 697082 + G 80 -10 -4.00532 | overlap 697054 TGGCTTCAGCGGGAG TGCTGTGG ATTG CCGCAGCA TTTGATGTTTCCCCG Neut_0692 696543 - 697937 + | major facilitator transporter Neut_0693 698412 - 698128 - | hypothetical protein TERM 528 698313 - 698301 - G 74 -4.1 -4.99035 | overlap 698304 TGATTGATACAAAAA CATCT GCC AGACG CAGCTTGCCTTCCGT Neut_0694 698964 - 698614 - | cytochrome C oxidase subunit IV Neut_0695 699632 - 698961 - | cytochrome c oxidase, subunit III Neut_0696 701740 - 699629 - | cytochrome-c oxidase Neut_0697 702745 - 701744 - | cytochrome c oxidase, subunit II TERM 529 702174 - 702164 - G 72 -4 -4.8622 | TGCTGGAATGAAAAA TGAT TGC ATCA CCGTGGCTGAAGTCA TERM 530 702242 - 702221 - G 73 -8.7 -3.72576 | overlap 702222 CTGCTCGGCAGGAAA CGCCAGCAT GCCG ACGCTGGCA ATGCCATGCTCAGGA TERM 531 702396 - 702385 - G 70 -3 -4.79949 | CGCTTAAAAAAAGAA CAAT GGCG ATTG GGATGCCCCAACTGA Neut_0698 702998 - 703885 + | UTP-glucose-1-phosphate uridylyltransferase TERM 532 703968 - 703921 - f 91 -13.1 -3.14211 | gap 2, opp_overlap 703925 703933 703939, overlap 703924 703933 ATCTGTTCTTACTAA CGATGCCTGAAATGTAAGTCCTC AATT GAGGATTTACATTTCAGGC-T-G AATTCCATCATTTCA TERM 533 703967 - 703924 - f 100 -18.4 -2.77899 | opp_overlap 703925 703933 703939, overlap 703921 703933 TGTTCTTACTAACGA TGCCTGAAATGTAAGTCCTC AATT GAGGATTTACATTTCAGGCT GAATTCCATCATTTC TERM 534 703925 - 703966 + F 100 -24.1 -2.56288 | opp_overlap 703924 703921 703933, overlap 703933 703939 GTTCTTACTAACGAT GCCTGAAATGTAAGTCCTC AATT GAGGATTTACATTTCAGGC TGAATTCCATCATTT TERM 535 703933 - 703958 + F 87 -11.3 -3.58269 | opp_overlap 703924 703921 703933, overlap 703925 703939 TAACGATGCCTGAAA TGTAAGTCCTC AATT GAGGATTTACA TTTCAGGCTGAATTC TERM 536 703958 - 703933 - f 73 -9.1 -3.56568 | opp_overlap 703933 703925 703939, overlap 703924 703921 TAACGATGCCTGAAA TGTAAGTCCTC AATT GAGGATTTACA TTTCAGGCTGAATTC TERM 537 703976 - 703986 + F 74 -4 -4.91977 | TCAGGCTGAATTCCA TCAT TTC ATGA TTTTATATTTTCATA Neut_0699 704156 - 704782 + | hypothetical protein TERM 538 705552 - 705526 - g 76 -12.4 -2.91264 | overlap 705546 TGGCGGATGCAGATA TTACCGCTGC GGCAAAG GCAGCGGTAA CCGGGAGATTTCAGA TERM 539 705707 - 705694 - g 78 -3.8 -5.14563 | CGCTCGACGAAAAAA CGGA TATTGG TCCG CTGGTCAATGAACAG Neut_0700 704802 - 706160 + | aldehyde dehydrogenase TERM 540 707867 - 707854 - g 76 -6.7 -4.56597 | GCCCGTTTCCAAAAA GCATG GGAA CATGC AGATATCCCACTCTC Neut_0701 706189 - 707904 + | TPR repeat-containing protein Neut_0702 709833 - 707995 - | AMP-dependent synthetase and ligase TERM 541 708905 - 708930 + g 72 -3.9 -4.77157 | gap 1, opp_overlap 708901 AGCTTGAATAACAGT CTGGCC-ACTGC AGA GCCTTCGGCCAG TTTTTCCTGGATTCC TERM 542 709694 - 709680 - G 70 -11.4 -2.53263 | CCCATGTGTAATCCA GCCAGG CTT CCTGGC TGACATCGTAGTCAC fadE 712166 - 709830 - | acyl-CoA dehydrogenase TERM 543 711802 - 711792 - G 74 -2.4 -5.07053 | AATCAGCGCAAAAAA GCGG TTT CCCC GGATAAATTGCCAGA TERM 544 711931 - 711957 + g 80 -9.5 -4.06502 | GTACTCAAAGTTGGT TTGGGATAGGC CAGCA GCTTGTCCCAA TTTGGTTTGCCGCTG Neut_0704 712541 - 712185 - | hypothetical protein Neut_0705 713017 - 712637 - | DoxX family protein Neut_0706 713928 - 713065 - | pirin domain-containing protein TERM 545 713947 - 713965 + H 73 -8.9 -3.50853 | TTTCTCCTTTTTCGT CCTGTCA TGCAT TGACAGG TTCTGCTTACCAGAA Neut_0707 714064 - 714996 + | transcriptional regulator, LysR family protein TERM 546 715946 - 715959 + G 78 -3.8 -5.15167 | AATTTTTGATCCAAC GCTG TATGAC CAGC TTTTTGTTAATGGTG Neut_0708 715167 - 716306 + | PEP motif-containing protein TERM 547 716722 - 716710 - g 80 -2.6 -5.45726 | CACACTGCAAAAAAA CGAG GCTGT CCCG GTAGTGTTTATCACA Neut_0709 716393 - 717088 + | oxidoreductase FAD/NAD(P)-binding subunit Neut_0710 718217 - 717225 - | ferroxidase Neut_0711 719172 - 718426 - | hypothetical protein TERM 548 719218 - 719184 - R 79 -4 -5.26316 | opp_overlap 719193 CCATCTCAGAAAAAA GGCTGGCTTGCCCC GGGAGGA GGGGCTGGCTTGCC GTCATAAATCACTGG Neut_0712 719506 - 719318 - | hypothetical protein Neut_0713 720231 - 719854 - | hypothetical protein TERM 549 720908 - 720934 + G 72 -9.5 -3.38581 | gap 1, overlap 720906 AACGTTGCCATGTCG GTCGATTGGGGA TATC TCCCC-ATCGGC TATTTCGGCGTTGAT Neut_0714 720323 - 722200 + | alpha amylase, catalytic region TERM 550 722555 - 722541 - g 70 -8.5 -3.66784 | opp_overlap 722548 CTATCGGGAAGATAA GCCGG AATCA CCGGC CAGTGATATTGAACA Neut_0715 722308 - 722580 + | hypothetical protein Neut_0716 724729 - 722636 - | TonB-dependent heme/hemoglobin receptor family protein TERM 551 724788 - 724802 + r 71 -2 -5.06414 | overlap 724789 724790 GTAGTGCTGGCTGGC TGGCTG GAA CAGCGG TTTTTGTTGCCACGG Neut_0717 726547 - 724826 - | cobalamin (vitamin B12) biosynthesis CbiX protein TERM 552 725177 - 725214 + g 71 -5 -4.46514 | gap 3, overlap 725202 CCATTTATCGTTGTG CTGATCATCCTG-C-GCGC CGT GCGCAGTCAGAATGA-CAG TTTCTTTAGATGGAT TERM 553 726077 - 726063 - G 74 -8.6 -4.07568 | opp_overlap 726046 726063 TTTTGTGCGCCAAAA CCTACT ACA AGTAGG TTTTGACGGGCCGTA TERM 554 726063 - 726077 + g 74 -8.6 -4.07885 | opp_overlap 726063, overlap 726046 TTTTGTGCGCCAAAA CCTACT ACA AGTAGG TTTTGACGGGCCGTA Neut_0718 727921 - 726620 - | hypothetical protein TERM 555 726657 - 726681 + g 72 -4.1 -4.77036 | opp_overlap 726657 AAGCTAGATAAATTA TTGATGCTGGC TTC GCCTGCTGCAA TTTTTGCTAATGCCG TERM 556 728062 - 728096 + H 74 -3.6 -5.10497 | opp_overlap 728069 728071, overlap 728071 CAGGGCTTTATTTAC ACATCAAGATGCGACA ATT TGTCGCATTTTCATTC TTTTTTGAATCAGTT TERM 557 728071 - 728087 + H 95 -10.9 -4.72772 | opp_overlap 728069 728071, overlap 728062 ATTTACACATCAAGA TGCGACA ATT TGTCGCA TTTTCATTCTTTTTT TERM 558 728087 - 728071 - H 78 -10.9 -3.23045 | opp_overlap 728071 728062, overlap 728069 ATTTACACATCAAGA TGCGACA ATT TGTCGCA TTTTCATTCTTTTTT TERM 559 728709 - 728699 - g 74 -4 -5.00884 | AGCGCGGGGAAAAAA TGAA GAG TTCA AGGGTGTTTCACTCT Neut_0719 728136 - 729377 + | BNR repeat-containing glycosyl hydrolase Neut_0720 729497 - 731986 + | TonB-dependent receptor TERM 560 733400 - 733421 + G 71 -5.1 -4.49344 | ATATCAATGAAATGC CGATTGCGA GTTA TCGTAACCG TTTTGTGCTGGGTTT Neut_0721 732301 - 734430 + | TonB-dependent receptor TERM 561 734444 - 734468 + F 85 -11.4 -3.481 | overlap 734442 AGCATATTCATTCTT CCTGCTGGCC AGTTC GGCTGGCAGG TTGGTATTTAACTTA TERM 562 735699 - 735711 + G 74 -4.8 -4.8048 | opp_overlap 735699 TGGAACAGTACGCAA GACG GGATA CGTC TTTTTGATGTGGGAG Neut_0722 734496 - 735734 + | putative signal peptide protein Neut_0723 735737 - 736234 + | putative signal peptide protein Neut_0724 736377 - 738935 + | 3-hydroxybutyryl-CoA epimerase TERM 563 738989 - 738977 - f 87 -4.9 -5.33405 | GTGATGAAATAAAAA TTCAA GTA TTGAA GGAGAAACTGATGAC Neut_0725 739000 - 740202 + | acetyl-CoA acetyltransferase TERM 564 740240 - 740208 - T 71 -4.9 -4.55697 | opp_overlap 740211, overlap 740204 740209 740211 AGCGCTATAAACAAA GCATCAGTCCGAT AGAGCAA ATCGGACTGATTT TGGCGGGCGGCTGAT TERM 565 740211 - 740237 + T 86 -11 -4.07687 | opp_overlap 740211 740209 740208 740204 GCTATAAACAAAGCA TCAGTCCGAT AGAGCAA ATCGGACTGA TTTTGGCGGGCGGCT TERM 566 740237 - 740211 - T 78 -11 -3.22499 | opp_overlap 740211, overlap 740209 740208 740204 GCTATAAACAAAGCA TCAGTCCGAT AGAGCAA ATCGGACTGA TTTTGGCGGGCGGCT Neut_0726 740594 - 740256 - | hypothetical protein Neut_0727 740909 - 740643 - | hypothetical protein TERM 567 741650 - 741677 + H 77 -9.8 -3.57651 | overlap 741649 741648 TTCATTAGGGGTATC TGGCTAACCGGG TTTT CCCGGATGGTCA TTCTCTGGTATCAAA TERM 568 741882 - 741892 + G 84 -4.6 -5.24129 | TTGTTTGTTGTTATG CTGG GTG CCGG TTTTTTCTGGACAGC TERM 569 743226 - 743259 + G 73 -5.3 -4.72272 | overlap 743236 TTTCCTGCAAGATGG CTGGGTATACTGGCA GGAT TGCCATTATTTCTAG TTTTTCCTGAAAAAC TERM 570 743236 - 743249 + G 71 -6.7 -4.22276 | overlap 743226 GATGGCTGGGTATAC TGGCA GGAT TGCCA TTATTTCTAGTTTTT Neut_0728 741696 - 744095 + | DNA internalization-related competence protein ComEC/Rec2 TERM 571 744139 - 744161 + F 93 -12.2 -4.08064 | ATTTACTACCCCTAG TTTGTAGGAA AAA TTCCTACAAA TTTTCAAGCCGAATT Neut_0729 744292 - 744609 + | transcriptional activator FlhD Neut_0730 744636 - 745211 + | transcriptional activator FlhC TERM 572 745266 - 745296 + F 70 -7.6 -3.91084 | TTCCACAAATAGTCA GCACTTGGTTTC CCTGAAT GGAGCCAGGTGC TTTACTTCAAGATCA TERM 573 745925 - 745955 + G 74 -3.9 -4.96848 | TTTCGCTGGTGGCAT TGGCAGGCGGTAT CCTGA ATACCTACAGCCA TTTTTCTGTGCCCGC Neut_0731 745489 - 747018 + | integral membrane protein MviN TERM 574 747488 - 747438 - T 100 -33.2 -5.17576 | opp_overlap 747456, overlap 747456 CACTAAGCTAAAAAA TGTATCTGTACAAAAAAACCGCCT TTT AGGCGGTTTTTTTGTACAGATACA AACTTCACCATGGAA TERM 575 747470 - 747456 - T 100 -11.4 -5.61596 | opp_overlap 747456, overlap 747438 ATCTGTACAAAAAAA CCGCCT TTT AGGCGG TTTTTTTGTACAGAT TERM 576 747456 - 747470 + T 100 -11.4 -5.61596 | opp_overlap 747456 747438 ATCTGTACAAAAAAA CCGCCT TTT AGGCGG TTTTTTTGTACAGAT Neut_0732 748906 - 747746 - | NlpB/DapX family lipoprotein Neut_0733 749794 - 748916 - | dihydrodipicolinate synthase TERM 577 749282 - 749256 - G 71 -5.2 -4.49756 | overlap 749259 749281 CTGTAAACAGCAAAA TTATCTGGTACA CGC TGCACCAAATCA CATCCGCGTGCAATA Neut_0734 752476 - 749885 - | ATPase Neut_0735 754451 - 752958 - | ferredoxin-dependent glutamate synthase TERM 578 754331 - 754297 - G 87 -4.2 -5.42259 | opp_overlap 754297 754326, overlap 754299 TGAGTTTCAAAAAAA TAGCGCAATCGCCCGA TGA TGGGATAATTGCGCAA TATGGTGTGCTTTTT TERM 579 754329 - 754299 - G 74 -6.8 -4.35085 | opp_overlap 754297 754326, overlap 754297 AGTTTCAAAAAAATA GCGCAATCGCCCGA TGA TGGGATAATTGCGC AATATGGTGTGCTTT Neut_0737 755953 - 755327 - | phosphoribosyltransferase Neut_0738 756145 - 757644 + | membrane bound O-acyl transferase, MBOAT family protein Neut_0740 760595 - 759321 - | flagellar hook-length control protein Neut_0741 761105 - 760653 - | flagellar export protein FliJ Neut_0742 762528 - 761122 - | flagellar protein export ATPase FliI TERM 580 761409 - 761353 - G 77 -11.7 -3.14132 | gap 1, overlap 761405 CTCGCGTGTTACCAA GCTGGCCATCACCCGGCTGATCGA GGACTCTATA TCTATC-GCCGGGTAATGACCGGC GTCGGCCAAGTGTCG TERM 581 762569 - 762590 + r 70 -10.1 -2.52464 | GTCAGCCAGTCTGGA TCCTGGCTG AGAG CGGCCAGGG TGCGTTGCCAGCGAG Neut_0743 763269 - 762550 - | flagellar assembly protein FliH Neut_0744 764456 - 763461 - | flagellar motor switch protein FliG TERM 582 763861 - 763890 + g 74 -4.9 -4.79223 | gap 1, overlap 763876 AAGTTCAGGATCTCT GCCGTGGTACGGAC ACC GCCCATAC-GCGGC TTTTTGATGCTATCA TERM 583 764260 - 764286 + g 71 -10.2 -3.05963 | TCCTGTCCCAGCGAG GTTCTGTCATCA GCT TGCTGGCAGAAC TCTTCCAGTACCAGT Neut_0745 766089 - 764446 - | flagellar M-ring protein FliF TERM 584 764494 - 764524 + g 76 -8.2 -4.19879 | opp_overlap 764494 764493 764518, overlap 764484 764483 764518 GACGTTGGCCACAAT GGCCGGTTCATTGG CAG CCAGTAATCTGGCC TTTTCCAGATTTTGT TERM 585 764518 - 764533 + g 70 -4.7 -4.63932 | opp_overlap 764494 764493 764518, overlap 764494 ATTGGCAGCCAGTAA TCTGG CCTTTT CCAGA TTTTGTTCCAGAGTC Neut_0746 766320 - 767564 + | PAS/PAC sensor signal transduction histidine kinase Neut_0747 767568 - 768881 + | two component, sigma54 specific, transcriptional regulator, Fis family protein fliE 768909 - 769238 + | flagellar hook-basal body protein FliE Neut_0749 769273 - 770082 + | YcgR family protein Neut_0750 770444 - 770103 - | putative flagellar biosynthetic protein-like protein Neut_0751 771456 - 770431 - | hypothetical protein Neut_0752 771811 - 772203 + | putative insertion sequence transposase protein TERM 586 772300 - 772323 + G 71 -10.2 -3.05384 | opp_overlap 772291 ACAGCAGGGTCGCGC GCCGCGCGGC CAGC GCTGTGTGGC TTCGGTGCCCCACGG Neut_0753 772277 - 772750 + | ISRm2011-2 transposase protein Neut_0754 773256 - 772798 - | cytochrome c, class I Neut_0755 773809 - 773285 - | hypothetical protein Neut_0756 774207 - 775148 + | PP-loop domain-containing protein Neut_0757 776119 - 775175 - | lipoyl synthase Neut_0758 776786 - 776109 - | lipoate-protein ligase B Neut_0759 777137 - 776874 - | hypothetical protein Neut_0760 778007 - 777147 - | aminotransferase, class IV Neut_0761 779169 - 778027 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 587 778880 - 778893 + g 76 -3.1 -5.08824 | gap 1, overlap 778877 AACATACGTGATCCT GCCATG CGC CA-GGC TTTTTTGGATACGGG rplM 779292 - 779726 + | 50S ribosomal protein L13 TERM 588 779789 - 779778 - g 78 -5.8 -4.82901 | opp_overlap 779777 CCGGCCGTAGAAAAA GTGC AGTT GCAC GGGTTTTTATTAAAT rpsI 779738 - 780130 + | 30S ribosomal protein S9 TERM 589 780191 - 780152 - f 100 -21 -3.28712 | opp_overlap 780152 780161, overlap 780161 TTGTTTTCTGGAGAA TACGAAAAAGCCGCCC TCTTTGTT GGGCGGCTTTTTCGTA TTGGGTTCACAACAC TERM 590 780152 - 780191 + F 100 -21 -3.17075 | opp_overlap 780152 780161, overlap 780161 TTGTTTTCTGGAGAA TACGAAAAAGCCGCCC TCTTTGTT GGGCGGCTTTTTCGTA TTGGGTTCACAACAC TERM 591 780182 - 780161 - f 93 -10.1 -4.90906 | opp_overlap 780152 780161, overlap 780152 GGAGAATACGAAAAA GCCGCCC TCTTTGTT GGGCGGC TTTTTCGTATTGGGT TERM 592 780161 - 780182 + F 91 -10.1 -4.88228 | opp_overlap 780161 780152, overlap 780152 GGAGAATACGAAAAA GCCGCCC TCTTTGTT GGGCGGC TTTTTCGTATTGGGT argC 780263 - 781291 + | N-acetyl-gamma-glutamyl-phosphate reductase Neut_0765 781392 - 782159 + | hypothetical protein Neut_0766 782140 - 782565 + | hypothetical protein Neut_0767 784254 - 782593 - | DNA repair protein RecN TERM 593 783255 - 783269 + g 78 -10 -3.94188 | TGTTTCCCACTACCT CCAGAC GCT GTCTGG TTGTTTCCAATAGCT Neut_0768 785154 - 784264 - | NAD(+) kinase hrcA 785371 - 786387 + | heat-inducible transcription repressor hemH 786407 - 787504 + | ferrochelatase Neut_0771 787616 - 788407 + | peptidase M48, Ste24p Neut_0772 788527 - 789399 + | phosphoribulokinase Neut_0773 789463 - 791709 + | UvrD/REP helicase Neut_0774 792507 - 791716 - | putative transmembrane protein Neut_0775 793548 - 792598 - | homoserine kinase TERM 594 793613 - 793598 - R 70 -5.4 -4.44046 | overlap 793594 GGGATGGCAAATAAA CCAGCA AGTT TACTGG AGATCGCTCAGGTTC Neut_0776 794022 - 793642 - | hypothetical protein Neut_0777 794802 - 794083 - | hypothetical protein TERM 595 794742 - 794757 + g 76 -6.8 -4.58395 | opp_overlap 794731 AAACCCGCCATGATT CTCTGG CTGA CCAGGG TTTTTCCAGGGTAAG TERM 596 796567 - 796556 - g 100 -5.8 -5.53991 | CAGTTATTAAAAAAA CACC AAAA GGTG CGCCATCCACTGATG Neut_0778 794818 - 797538 + | DNA polymerase I TERM 597 798425 - 798412 - g 100 -6.7 -5.47399 | CGAAGGTGAAAAAAA CAGCT CCCA AGCTG CAACTTAATAAAGCC Neut_0779 797661 - 798848 + | fatty acid desaturase TERM 598 798875 - 798927 + T 85 -11.5 -3.49527 | opp_overlap 798883 798887 798894, overlap 798879 798887 798894 TGCTTCGGAAGGATG TAAGTTAAGCAATAAAAAACCCGCT AAA AGCGGGTTTTTTATTGCTGGTAATA ATTTATTTTAGTTTT TERM 599 798879 - 798925 + T 100 -15.7 -3.28108 | gap 2, opp_overlap 798883 798887 798894, overlap 798875 798887 798894 TCGGAAGGATGTAAG TTA--AGCAATAAAAAACCCGCT AAA AGCGGGTTTTTTATTGCTGGTAA TAATTTATTTTAGTT TERM 600 798919 - 798883 - T 100 -24.1 -3.19936 | opp_overlap 798879 798875 798887 798894, overlap 798887 798894 AAGGATGTAAGTTAA GCAATAAAAAACCCGCT AAA AGCGGGTTTTTTATTGC TGGTAATAATTTATT TERM 601 798887 - 798915 + T 100 -17.7 -3.2396 | opp_overlap 798883 798887 798894, overlap 798879 798875 798894 ATGTAAGTTAAGCAA TAAAAAACCCGCT AAA AGCGGGTTTTTTA TTGCTGGTAATAATT TERM 602 798915 - 798887 - T 100 -17.7 -3.40788 | opp_overlap 798887 798879 798875 798894, overlap 798883 798894 ATGTAAGTTAAGCAA TAAAAAACCCGCT AAA AGCGGGTTTTTTA TTGCTGGTAATAATT TERM 603 798908 - 798894 - T 100 -11.4 -5.5604 | opp_overlap 798887 798879 798875 798894, overlap 798887 798883 TTAAGCAATAAAAAA CCCGCT AAA AGCGGG TTTTTTATTGCTGGT TERM 604 798894 - 798908 + T 100 -11.4 -5.52023 | opp_overlap 798894 798887 798883, overlap 798887 798879 798875 TTAAGCAATAAAAAA CCCGCT AAA AGCGGG TTTTTTATTGCTGGT Neut_0780 799085 - 798930 - | ribosomal protein L33 rpmB 799362 - 799126 - | 50S ribosomal protein L28 radC 800105 - 799431 - | DNA repair protein RadC TERM 605 800294 - 800268 - g 70 -8 -3.72576 | opp_overlap 800261 800266 800268 800287 800288, overlap 800269 800288 800290 CTCGCTTGCAGGAAA GCGCCTGTTATT GGG AGTAACAGGCGG TATTGCTGCCTATAA TERM 606 800268 - 800294 + G 71 -10.2 -3.16492 | opp_overlap 800268 800269 800288 800290, overlap 800261 800266 800287 800288 CTCGCTTGCAGGAAA GCGCCTGTTATT GGG AGTAACAGGCGG TATTGCTGCCTATAA TERM 607 800293 - 800269 - g 71 -11.5 -2.83403 | opp_overlap 800261 800268 800266 800287 800288, overlap 800268 800288 800290 TCGCTTGCAGGAAAG CGCCTGTTATT GGG AGTAACAGGCG GTATTGCTGCCTATA Neut_0783 800239 - 801444 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase dut 801454 - 801903 + | deoxyuridine 5'-triphosphate nucleotidohydrolase Neut_0785 801897 - 802322 + | hypothetical protein TERM 608 802648 - 802667 + T 100 -13.6 -4.59773 | opp_overlap 802648 AGGATGTACGAAAAA GCCCACCA GATT TGGTGGGC TTTTTGGCAGTGGAG TERM 609 802667 - 802648 - T 100 -13.6 -4.75372 | opp_overlap 802648 AGGATGTACGAAAAA GCCCACCA GATT TGGTGGGC TTTTTGGCAGTGGAG hppA 804752 - 802695 - | membrane-bound proton-translocating pyrophosphatase TERM 610 804490 - 804478 - G 80 -10.5 -3.73775 | TTCATGCCCATGAAA CCGGC CAG GCCGG AAAGTATAGCTCCCA TERM 611 804593 - 804563 - G 70 -2.7 -4.75219 | gap 1, opp_overlap 804572, overlap 804566 TAATTAGGAATAAAA CCATACCT-ACCAT ACCA ATGGTTAGATATTG TCGCTTGAGGTAAGC Neut_0787 806165 - 804906 - | 6-phosphofructokinase TERM 612 805664 - 805654 - G 74 -6.8 -4.34402 | overlap 805655 805656 CTGGCGACATCAAAA CTGG CTT CCAG CATGGAAACAGCTAC TERM 613 807291 - 807281 - g 85 -4 -5.50723 | GGACGAAAACAAAAA TAAG GCA CTTA CGGCTGCACTAGCGC recA 807264 - 808295 + | recombinase A Neut_0790 808298 - 808738 + | regulatory protein RecX TERM 614 809695 - 809709 + G 91 -5.6 -5.40004 | CATGGATACCGGCTC GGACAG AAA CAGTCC TTTTTTCATTTGCTG Neut_0791 808756 - 811347 + | alanyl-tRNA synthetase Neut_0792 811386 - 812339 + | thioredoxin reductase Neut_0793 812483 - 812941 + | Smr protein/MutS2 Neut_0794 813146 - 813292 + | hypothetical protein Neut_0796 814204 - 813995 - | response regulator receiver protein Neut_0797 814343 - 814792 + | hypothetical protein TERM 615 815332 - 815344 + G 84 -10.5 -4.07877 | TGTCTAGTGGCTTTG CCGGC CCT GCCGG TTCTTTCTGCCGTCG TERM 616 815969 - 815985 + G 74 -10.1 -3.6215 | overlap 815970 815982 TGGCGTTGGCTGCGT TTGCGCG TTC CGCGCAG TTTCCGCTGCATTCC TERM 617 815970 - 815984 + G 71 -11.4 -2.76969 | overlap 815969 815982 GGCGTTGGCTGCGTT TGCGCG TTC CGCGCA GTTTCCGCTGCATTC Neut_0799 815296 - 816990 + | NADH dehydrogenase (quinone) Neut_0800 816994 - 817794 + | hypothetical protein TERM 618 817939 - 817964 + G 75 -12.5 -2.52543 | AGGCGGTTCAGGCTG CGCGCGGGCTT TTCC ATGCCCGCGTG TACCTTCCACGCACT TERM 619 818602 - 818616 + G 70 -11.4 -2.70298 | overlap 818601 GCTTTATCCGCTGGC GCTCGG GAG CCGAGC ATTATCATTGGGGAC TERM 620 819336 - 819323 - g 86 -6.7 -5.05782 | opp_overlap 819323 AGTCACGCCAAAAAA TCTCG TGCT CGAGA TTTCCGCTGCAATCG Neut_0801 817779 - 820907 + | hypothetical protein Neut_0802 820904 - 821230 + | nitrogen regulatory protein P-II Neut_0803 822152 - 821232 - | transcriptional regulator, LysR family protein rbcL 822352 - 823773 + | ribulose bisophosphate carboxylase TERM 621 823907 - 823891 - g 100 -8.1 -5.8187 | opp_overlap 823891 823893 CACTTAACAAAAAAA TACGAAA CCT TTTCGTA TCTTCCCCAGATGAC Neut_0805 823858 - 824184 + | ribulose-bisphosphate carboxylase TERM 622 824421 - 824395 - g 89 -10.8 -4.30576 | CCGCCATTACCAAAA CGTCTGTGCTGC GCA GCAGGGCAGACG TCGCCATGAATGCAG TERM 623 825750 - 825731 - g 70 -10 -3.25823 | gap 1 CTTGTGCCATACCAA TGCGCCGGC AGC GCC-GCGCA AGGTCAGTGTGATGT TERM 624 826728 - 826705 - g 73 -11.8 -2.50994 | gap 1, overlap 826704 TGCAACTGGATGAAG TC-GTCGCTGC TGC GCAGCGACTGA GCGGTGAAGGTAGTC Neut_0806 824286 - 826985 + | carboxysome shell protein CsoS2 Neut_0807 826996 - 828525 + | carboxysome shell polypeptide, CsoS3 Neut_0808 828546 - 828803 + | ethanolamine utilization protein EutN/carboxysome structural protein Ccml TERM 625 828934 - 828906 - g 76 -11.8 -2.92935 | gap 2, overlap 828903 AGAAGGGTGAAATCA TGGTGGCGTCCGAC GCG GTCGG-CGCC-CCA CCGGGAAAATGGGTG Neut_0809 828803 - 829051 + | ethanolamine utilization protein EutN/carboxysome structural protein Ccml TERM 626 829106 - 829086 - f 79 -8.1 -4.39166 | opp_overlap 829087, overlap 829087 GCGTATAGAGCAAAA GGCGCACGC ATG GCGGGCGCT TGAGTGCAGAGAAGT TERM 627 829105 - 829087 - f 81 -11.6 -3.23018 | opp_overlap 829087, overlap 829086 CGTATAGAGCAAAAG GCGCACGC ATG GCGGGCGC TTGAGTGCAGAGAAG TERM 628 829087 - 829105 + F 79 -11.6 -3.05384 | opp_overlap 829087 829086 CGTATAGAGCAAAAG GCGCACGC ATG GCGGGCGC TTGAGTGCAGAGAAG Neut_0810 829160 - 829456 + | microcompartments protein Neut_0811 829498 - 829845 + | microcompartments protein Neut_0812 829866 - 830288 + | Ferritin, Dps family protein Neut_0813 830285 - 830563 + | hypothetical protein TERM 629 831019 - 831007 - g 71 -10.5 -3.16267 | CTCAATCAGATTGAA GCGCG CAG CGCGC TATCAGCGGCGATGC Neut_0814 830575 - 831204 + | cobyrinic acid a,c-diamide synthase TERM 630 831355 - 831366 + F 82 -7.2 -4.72272 | CTGAGCCGGTTTCGA GCGC TCAG GCGC TTTTTCCTGACCGCG Neut_0815 831516 - 832352 + | CbbQ/NirQ/NorQ C-terminal domain-containing protein Neut_0816 832375 - 834735 + | von Willebrand factor, type A TERM 631 834938 - 834923 - g 83 -3.2 -5.40072 | TCGCGCTGAAAAAAA CCAATG TGCG CATGGG CGAGCAGGTGGTGGA Neut_0817 834748 - 835380 + | microcompartments protein Neut_0818 835425 - 836249 + | hypothetical protein Neut_0821 838070 - 838372 + | hypothetical protein TERM 632 838463 - 838475 + T 86 -3.3 -5.51046 | CTGCTAGAAATATTC CAGGG ATA CACTG TTTTTTATCTCTTTG TERM 633 839294 - 839314 + T 81 -3.1 -5.35222 | overlap 839301 CACTTAAGCCGATCC CACCCTGTC CGC GCCGGGATG TTTTTTCTCCATTTT TERM 634 839943 - 839962 + T 77 -5 -5.02502 | opp_overlap 839943 TATTTAATAATCATA CATTAGTC GCGC GCCTAATG TTTTTATGTCATCTG Neut_0823 840549 - 840130 - | hypothetical protein Neut_0824 840668 - 840913 + | hypothetical protein Neut_0825 842205 - 841237 - | farnesyltranstransferase hemA 842389 - 843642 + | glutamyl-tRNA reductase TERM 635 843732 - 843719 - g 71 -5.3 -4.45544 | GTTGAGCAATGAAAA GATCA CGGC TGATC TGGATAATTATCGGA prfA 843639 - 844718 + | peptide chain release factor 1 TERM 636 845103 - 845118 + G 71 -10.4 -3.09671 | ACATTCTTGATTTGG GCACCG GAAG CGGTGC TATTGCCATTACAAT Neut_0828 844715 - 845596 + | modification methylase, HemK family protein Neut_0829 845751 - 846059 + | glutaredoxin-like protein Neut_0830 846499 - 846080 - | putative inner membrane protein TERM 637 846168 - 846140 - G 86 -3.1 -5.5353 | opp_overlap 846142, overlap 846141 GATAGCAATAAAAAA TGCTGCGGA GGCCCAGTTGA TCCGCAGCC ATCCGGCAGCCACAC Neut_0831 846949 - 847581 + | glutathione S-transferase domain-containing protein Neut_0832 847853 - 848137 + | hypothetical protein Neut_0833 848630 - 849157 + | hypothetical protein Neut_0834 850357 - 849242 - | hypothetical protein TERM 638 850314 - 850336 + g 88 -10.6 -4.20783 | opp_overlap 850313 850312 850314 TCAGGAGAAGAAATT GCTCTGGC TTGTGGT GCCAGAGC TTTGTTCAATGAAAT Neut_0835 851700 - 850342 - | hypothetical protein TERM 639 851247 - 851261 + g 70 -8.6 -3.65902 | GCCCCTTTGTTTTCG CCATTG TAA CAATGG TTTCGATCCACTCGA TERM 640 851509 - 851497 - G 70 -4.8 -4.62336 | ACGCCATTGCAAAAA CTCC AACGG GGAG AGTAGTTCCCGGATA Neut_0836 853544 - 852339 - | DnaJ N-terminal domain-containing protein TERM 641 853567 - 853553 - R 73 -4.3 -4.80882 | AGGGCATAGTAAAAA TTCCA GAATA TGGAA GTCCAAAAATTCATT Neut_0837 855094 - 853913 - | aminotransferase, class I and II TERM 642 854629 - 854603 - G 74 -6.5 -4.43307 | gap 1 CGGGGAACAAAATAA CAGCATGCGCGC AGAA GC-CGCCTGCCG GGCCAGATCAGCAAA TERM 643 854739 - 854726 - G 70 -3.1 -4.88736 | gap 1, overlap 854728 GACCACCGAGAAAAA CGG-GT AAT ACACCG GCGGCTGAACTATGA Neut_0838 857208 - 855091 - | hypothetical protein TERM 644 857924 - 857951 + r 83 -5.4 -5.19275 | opp_overlap 857929, overlap 857925 857929 TGGGTGAGCGCACAA AAAAAGCGCCGG TTAC CCGGCGCTTGAG TTTTATTTTATGAAT TERM 645 857925 - 857950 + r 75 -8.9 -3.69938 | opp_overlap 857929, overlap 857924 857929 GGGTGAGCGCACAAA AAAAGCGCCGG TTAC CCGGCGCTTGA GTTTTATTTTATGAA TERM 646 857946 - 857929 - R 100 -14.1 -5.626 | opp_overlap 857925 857924 857929 GAGCGCACAAAAAAA GCGCCGG TTAC CCGGCGC TTGAGTTTTATTTTA TERM 647 857929 - 857946 + r 100 -14.1 -3.51324 | opp_overlap 857929, overlap 857925 857924 GAGCGCACAAAAAAA GCGCCGG TTAC CCGGCGC TTGAGTTTTATTTTA Neut_0840 858612 - 857989 - | PEP motif-containing protein TERM 648 858229 - 858218 - G 76 -4.4 -5.04356 | TCAAAGAAGTAAAAA GCAT TGTT ATGC CCACCGTGCATATGA TERM 649 858892 - 858873 - R 100 -15 -5.24129 | TTTTCCGACAAAAAA CGCCCTGC GGGA GCAGGGCG CTGAATGCTGGGAAT Neut_0841 861222 - 859102 - | peptidase S8 and S53, subtilisin, kexin, sedolisin apaG 861610 - 861993 + | ApaG Neut_0843 862006 - 862740 + | uroporphyrin-III C/tetrapyrrole methyltransferase Neut_0844 864045 - 862825 - | sodium:dicarboxylate symporter TERM 650 863322 - 863297 - G 86 -6.9 -5.00884 | ATCGCTCGTAAAAAA GTAGTTGGTGA ATGG CCACCAAATAC GGTTGCTCCGAACAG Neut_0845 864904 - 864359 - | redoxin domain-containing protein Neut_0846 867003 - 865060 - | protein-disulfide reductase TERM 651 865230 - 865252 + g 70 -2.6 -5.03314 | overlap 865231 GTGTTCCTTCAGTTA CGTTGATCTG AAC CAGCTCGACA TTTTTTAGACGTGCC TERM 652 865381 - 865394 + g 83 -3.1 -5.38326 | overlap 865366 CCGGATGAGTTCGTC CAGTT CTGC AGCTG TTTTTATTTGCTTGA Neut_0847 867387 - 867016 - | CutA1 divalent ion tolerance protein Neut_0848 867474 - 867668 + | hypothetical protein TERM 653 868234 - 868217 - g 70 -4.9 -4.68908 | gap 1, opp_overlap 868221, overlap 868221 GCTATCCAAAATAAA GCAGTTGG CCG CCAA-TGC TGTACAGCTTGATAA Neut_0849 867771 - 868454 + | SH3 type 3 domain-containing protein TERM 654 868431 - 868444 + T 71 -2.4 -5.07486 | CAATGGCGCAAACGG TCAC GCTACA GTGA TTTTTCTTAAGGGTA Neut_0850 869367 - 868492 - | nuclease TERM 655 869503 - 869490 - H 77 -3.1 -5.28983 | GTTAAAAGACAAAAA CTGAT GGCT ACCAG TCCGTTGATTGAATT Neut_0851 869493 - 870308 + | ABC transporter-related protein TERM 656 870773 - 870795 + G 70 -9.9 -3.3334 | gap 1, opp_overlap 870727 TGGCAGTGGACCCGA TCGC-GCGCA TCGT TGCGCCGCGA TTCTGGGGTGGAGTT Neut_0852 870346 - 871143 + | hypothetical protein Neut_0853 871143 - 871622 + | hypothetical protein Neut_0854 871638 - 872255 + | toluene tolerance family protein Neut_0855 872262 - 872576 + | anti-sigma-factor antagonist TERM 657 873031 - 873016 - g 74 -4 -4.9792 | GATCTCACAGAAAAA GCACAT GCGA ATGTAC GCGCCTTGTCAGGTG TERM 658 873391 - 873350 - g 70 -10.9 -2.91276 | gap 1, opp_overlap 873351, overlap 873349 TGTCTTCGGAGAAAT TGCCATCCGGTTTA-CAGGC ATG GCCAGGTAAACAGGATGGCT GTCTGCACAGTCTGA TERM 659 873351 - 873390 + G 83 -14.4 -2.88249 | gap 1, opp_overlap 873350 873349 GTCTTCGGAGAAATT GCCATCCGGTTTA-CAGGC ATG GCCAGGTAAACAGGATGGC TGTCTGCACAGTCTG Neut_0856 872638 - 873552 + | ABC transporter-related protein Neut_0857 873549 - 874304 + | ABC-2 type transporter Neut_0858 874349 - 874603 + | BolA family protein Neut_0859 875951 - 874659 - | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase kgd 878831 - 875973 - | alpha-ketoglutarate decarboxylase TERM 660 878444 - 878456 + g 73 -5.5 -4.73388 | ATTCCGGGTCAAGTT CGGGA ACA TCCTG TTTTTGCTGCAAATT Neut_0861 880276 - 878993 - | citrate synthase I TERM 661 879891 - 879837 - G 73 -2.7 -4.91109 | gap 1, overlap 879842 879845 GCGTCATGATAAAAA GCAGACAATGCACCCACCACGCCGAC CATG ACCGCCATGGGATGTGCATCG-CGGC GAAATCCGCTGAGAA Neut_0862 880567 - 880334 - | hypothetical protein sdhB 881259 - 880564 - | succinate dehydrogenase iron-sulfur subunit Neut_0864 882818 - 881388 - | threonine synthase TERM 662 882164 - 882176 + g 70 -3.3 -4.88407 | opp_overlap 882161, overlap 882161 882167 TGATCGAATTGACCG CACCG ATC CGGTA TTTTTGCTTGAATAC Neut_0865 884259 - 882943 - | homoserine dehydrogenase Neut_0866 885592 - 884366 - | aminotransferase AlaT Neut_0867 885884 - 886267 + | hypothetical protein Neut_0868 886409 - 888739 + | phosphoenolpyruvate synthase TERM 663 888845 - 888859 + G 70 -8.6 -3.73224 | opp_overlap 888839 TGGAATAGAGTGGAA GAAGCA CTA TGCTTC TTTCCTGGACAGTGC Neut_0869 888744 - 889571 + | hypothetical protein Neut_0870 890131 - 889613 - | NLP/P60 protein Neut_0871 891963 - 890266 - | glutaminyl-tRNA synthetase Neut_0872 892152 - 893750 + | lysyl-tRNA synthetase Neut_0873 893852 - 894508 + | hypothetical protein TERM 664 895234 - 895220 - f 85 -11.4 -3.53012 | overlap 895205 GCCTCGCGCGGCAAA GCCTGC CAG GCAGGC AGCAGTGTGTGATCG Neut_0875 895702 - 896229 + | hypothetical protein Neut_0876 897314 - 896691 - | flavodoxin/nitric oxide synthase TERM 665 897436 - 897426 - R 83 -5.4 -5.23292 | GCATATAAAATAAAA TTGC TCA GCAA AAGACATCTTGTCAG TERM 666 897541 - 897551 + r 72 -3.2 -4.91987 | TGAAAAGATTTGAAT CTGA GCA TCGG TTTTGTTATTCGCTT TERM 667 898147 - 898201 + r 77 -11.6 -2.70932 | gap 1 GTTGAGCGACTTCTC TCCGT-ATCTGCCGGGTCATCGCAA AATCGC TTGTGATGACCCGGGGGACAATGGA TGGTTACCGGCGCGC Neut_0878 899035 - 898205 - | beta-glucosidase TERM 668 898631 - 898649 + g 70 -10.2 -3.01712 | AATGTTTTCCCTGCC GGTGCCCG GAA CCGGCACC TGTTCGAACACACGA TERM 669 898984 - 898952 - G 77 -10.5 -3.62275 | overlap 898954 ATTGATGACCCCAAA TAGGATGTCGGCCAC CAC GTCGCCGTCATCCTG ACCCGGAAACCATGC TERM 670 898982 - 898954 - G 82 -13.1 -3.39018 | overlap 898952 TGATGACCCCAAATA GGATGTCGGCCAC CAC GTCGCCGTCATCC TGACCCGGAAACCAT Neut_0879 900012 - 899038 - | beta-glucosidase Neut_0880 901510 - 900338 - | hypothetical protein Neut_0881 902337 - 901591 - | short-chain dehydrogenase/reductase SDR TERM 671 902191 - 902175 - G 80 -2.3 -5.41143 | CACCCTTTAAAAAAA CAATC TGACCTG GATTG CTCTGCGCGATTGCT Neut_0882 902857 - 902450 - | transcriptional regulators, TraR/DksA family protein Neut_0883 903539 - 903063 - | transposase, IS4 family protein Neut_0884 903855 - 903481 - | putative transposase Neut_0885 903912 - 904235 + | transposase IS3/IS911 family protein Neut_0886 904453 - 904749 + | transposase IS3/IS911 family protein TERM 672 904790 - 904778 - f 77 -4.8 -5.00138 | CACCCAAAGGAAAAA GACC TATCC GGTC GGCTTGATGTGCCGA Neut_0887 904797 - 905624 + | integrase catalytic subunit TERM 673 906469 - 906488 + T 80 -10 -3.78904 | opp_overlap 906464 ATCAATATTATTTTG CTCGGGCA AAAC TGCCTGAG TTATTAGATTTACTG Neut_0889 907828 - 906461 - | DEAD/DEAH box helicase domain-containing protein TERM 674 908021 - 908004 - R 82 -9.1 -4.18119 | ATGAAACTAGATAAA CCCTACC TTGA GGCAGGG TGGCAAGTATACAGT Neut_0890 909761 - 908094 - | putative ABC transporter ATP-binding protein Neut_0891 910626 - 911243 + | polysaccharide export protein TERM 675 911425 - 911402 - g 70 -9.6 -3.28712 | GTTTTTCGTTTATAA GATGCCGGAT AATT ATCAGGCATC TGCGCGAATTTACGT TERM 676 911779 - 911768 - g 90 -5.8 -5.26875 | opp_overlap 911768 GCTGGAAGGAAAAAA GCAG GATT CTGC TTCTGCGTTACGTTT TERM 677 911961 - 911946 - g 70 -4.6 -4.62302 | opp_overlap 911942 GAAGAGCTGGAAAAA GCCAGG CTTT CCTTGC TTGAAGCTGAGCAAG Neut_0892 911286 - 912830 + | lipopolysaccharide biosynthesis TERM 678 912821 - 912807 - f 70 -6.4 -4.21194 | GTTTACTACGTAAAA CCGCAT GTT ATGCAG ACTACTTAGATTGTT TERM 679 913139 - 913125 - g 70 -2.9 -4.89477 | GCGCTAACAAGAAAA CAATT AAAAA AATTG AAATTGATCTGGAAA Neut_0893 912917 - 913849 + | putative capsular polysaccharide biosynthetic protein-like protein Neut_0894 913849 - 915429 + | hypothetical protein Neut_0895 915443 - 916276 + | AAA ATPase TERM 680 916749 - 916769 + G 70 -4.6 -4.70319 | AAAACACGACCATTA CGGGATGC CAGAT GCACCTCG TTTTGCTTTTAATCC Neut_0896 916282 - 917121 + | polysaccharide deacetylase TERM 681 917727 - 917739 + G 73 -3.3 -5.00884 | overlap 917728 GCCAGTGTGCATCGC TTGGG TAC CCCGG TTTTTTCCCGAAAAT TERM 682 918041 - 918023 - g 91 -3 -5.76949 | TAGTTTCAAAAAAAA CTGGGGAT TGG AACCGCAG CCGTTATTTTATGAG Neut_0897 917118 - 918197 + | hypothetical protein TERM 683 919323 - 919334 + G 71 -7.2 -4.08767 | CTATGGGGCGGGCTG CCCG GAAC CGGG TTTTGCAAGACTACA Neut_0898 918203 - 919414 + | glycosyl transferase, group 1 Neut_0899 919495 - 921063 + | eight transmembrane protein EpsH TERM 684 921777 - 921763 - g 81 -6.4 -5.0133 | overlap 921765 TATTGCGTGAAAAAA TACCTG TAA CAGGCA GGCCGTTGCGCCTTG TERM 685 921775 - 921765 - g 71 -6.8 -4.13561 | overlap 921763 TTGCGTGAAAAAATA CCTG TAA CAGG CAGGCCGTTGCGCCT Neut_0900 921069 - 922241 + | glycosyl transferase, group 1 TERM 686 924095 - 924079 - g 73 -5.1 -4.72272 | opp_overlap 924070 GGTCTTCATCAAAAA GATGTTG GAT CAGCATC AATCCGGCAGACGGG Neut_0901 922283 - 924217 + | asparagine synthase (glutamine-hydrolyzing) Neut_0902 924253 - 925260 + | hypothetical protein Neut_0903 925260 - 926198 + | hypothetical protein Neut_0904 926264 - 927337 + | hypothetical protein Neut_0905 927490 - 928437 + | hypothetical protein Neut_0906 929575 - 928454 - | hypothetical protein TERM 687 928518 - 928502 - G 72 -8 -3.85092 | opp_overlap 928501 928507 928510, overlap 928510 AGCACTGATATCAAA GGGTAC AACAG GTACCC AGTTGTTATTACCTT TERM 688 928756 - 928742 - G 71 -7 -4.12942 | opp_overlap 928741 GTAAACCTTGCAAAA CCTGCC TGT GGCTGG ATCAATTTTTGCCAG TERM 689 930687 - 930697 + G 70 -4.6 -4.66833 | opp_overlap 930670 ACGAAAATGATTCCA CCCT GCA GGGG TTTTTGACATTAAAG Neut_0907 929645 - 931537 + | peptidyl-tRNA hydrolase TERM 690 932628 - 932638 + G 70 -4.6 -4.66833 | ATGAGAATGATTCGG CCCT GCA GGGG TTTTTGACATTAAAG TERM 691 933167 - 933153 - g 71 -7.1 -4.19817 | opp_overlap 933161 GTTACCTAGCTAAAA CAGGC TGTTT GCCTG AGCAGTGTATTATCG Neut_0908 931604 - 933457 + | peptidyl-tRNA hydrolase Neut_0909 934967 - 933531 - | polysaccharide biosynthesis protein TERM 692 934079 - 934061 - G 85 -11.8 -3.67517 | CAGCAATACTGGAAA TTCCCCAT AGT ATGGGGAA AGCTACCAGGCTAAG Neut_0910 936893 - 935124 - | asparagine synthase TERM 693 935656 - 935633 - G 100 -7.4 -5.4148 | opp_overlap 935633 GAAATAAGTAAAAAA TCCGTCCAGG ATCA CCTGAATGGA TTGAGTCCAGCTCAG TERM 694 937806 - 937816 + G 72 -4 -4.78981 | TATAGCCGTTGATCC TGTT TAT AACA TTTCTTTTCCTTCAT TERM 695 938115 - 938128 + G 70 -3.1 -4.86939 | GATGTCTGGTGTCCT TGGAG TTAT TTCCA TTTTTAGCTTTCTTG Neut_0911 937387 - 938196 + | hypothetical protein TERM 696 938751 - 938765 + G 73 -2.8 -5.055 | AGCTTTGATCATGAT TATCCC TTT GGTATA TTTTTTGCAACTTCA Neut_0912 938212 - 939480 + | O-antigen polymerase Neut_0913 940382 - 939483 - | hypothetical protein Neut_0914 940933 - 940430 - | protein tyrosine phosphatase Neut_0915 941058 - 942803 + | lipid ABC transporter ATPase/inner membrane protein TERM 697 942843 - 942868 + T 76 -2.6 -5.22039 | gap 1, overlap 942846 TTTTTCGCTGAAGCT GAGCCAC-ATG CAGGA CATTGTGGATC TTTTTTCAGTTTGAA Neut_0916 943585 - 942824 - | UBA/THIF-type NAD/FAD binding protein Neut_0917 945044 - 943614 - | carboxyl-terminal protease TERM 698 944406 - 944453 + g 72 -8.4 -3.84719 | ATTTTCTCCCGTACG CTCCTGGAACTGGGTAATGCGT ACAT AGGCGTAACCCGGTTCAATGAG TTTGGATTTGACACT Neut_0918 946406 - 945126 - | peptidase M23B TERM 699 946069 - 946089 + g 83 -3.2 -5.52384 | overlap 946073 GATTTTTTTTGTAAG CGGGCAAG CTTGT CTTGTGCG TTTTTTTGCTGGCGC Neut_0919 947155 - 946406 - | phosphoglycerate mutase 1 family protein TERM 700 946617 - 946627 + g 100 -5.4 -5.97575 | GAATTCCCGTGAGCG GTGA TAA TCAC TTTTTTTTCTGCCTT TERM 701 947759 - 947747 - g 70 -9.1 -3.53012 | overlap 947731 TCTGTGTCGGCGAAA CGCTG GCG CAGCG TGAGGCAAATGAGAC Neut_0920 947356 - 948114 + | Triose-phosphate isomerase secG 948133 - 948498 + | preprotein translocase subunit SecG TERM 702 948721 - 948738 + G 78 -4.1 -5.10765 | overlap 948723 TGCTGGATACCATGC TTGGGAA TTAT TTCCCTA TTTTATTGTTTATTT TERM 703 948723 - 948736 + G 71 -6.7 -4.12859 | overlap 948721 CTGGATACCATGCTT GGGAA TTAT TTCCC TATTTTATTGTTTAT Neut_0922 948717 - 949073 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Neut_0923 949077 - 949553 + | NADH dehydrogenase subunit B Neut_0924 949563 - 950183 + | NADH dehydrogenase subunit C Neut_0925 950241 - 951494 + | NADH dehydrogenase subunit D Neut_0926 951491 - 951979 + | NADH dehydrogenase subunit E TERM 704 952099 - 952085 - g 89 -2.2 -5.75342 | TTGCGTTAAAAAAAA TTCTTT CGC AAAAAA TTCCTCCGGAAGTTG TERM 705 952110 - 952100 - g 79 -5.4 -5.00616 | opp_overlap 952100 TTCTTTCGCAAAAAA TTCC TCC GGAA GTTGTGATTGAGGAA TERM 706 952749 - 952770 + G 71 -6.5 -4.15106 | opp_overlap 952753, overlap 952750 952753 TAAACCGGGTAACTA TGAAGTGCC TATG GGCACTCCG TTTTCAAAGTTGCTG Neut_0927 951976 - 953253 + | NADH-quinone oxidoreductase, F subunit TERM 707 953391 - 953409 + G 74 -2.5 -5.18726 | gap 1, overlap 953391 953392 ATGCTGCCAAGCAGG T-TGGGAT ATAC ATCCCACA TTTTTGTTATCACAA TERM 708 954490 - 954467 - g 76 -12.5 -2.65384 | overlap 954466 954464 954469 ACATTACGCAAAGAT CATCCGCTG CTTGCT CAGCGGATG CGTCAAGCAGTAAAA TERM 709 954662 - 954643 - g 73 -2.8 -5.04601 | overlap 954645 TGCAGAAATTAAAAA TATGCCCA TATC TGAGCAGA TTGCATCTGCAGTAA Neut_0928 953315 - 955720 + | NADH dehydrogenase subunit G Neut_0929 955745 - 956842 + | respiratory-chain NADH dehydrogenase, subunit 1 Neut_0930 956860 - 957348 + | NADH dehydrogenase subunit I Neut_0931 957367 - 957972 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 Neut_0932 958028 - 958333 + | NADH dehydrogenase subunit K Neut_0933 958394 - 960340 + | proton-translocating NADH-quinone oxidoreductase, chain L TERM 710 960673 - 960696 + G 90 -9 -4.64334 | ATTATTATTTGGGGG TTGATGGCAT ATCA ATGCCATTAA TTTTATTGAACAGTT Neut_0934 960429 - 961910 + | NADH dehydrogenase subunit M TERM 711 961962 - 961942 - f 76 -2.6 -5.18726 | overlap 961945 TTTGGATAATAAAAA TACTTTCC TGATC GGAAATTA AGGATTTTTCATGGA TERM 712 962464 - 962485 + G 70 -2.1 -5.04601 | overlap 962474 CATCAAATTTTTTGT TCTGGGCGC ACTG GCTTCCGGG TTTTTGCTTTATGGC TERM 713 963220 - 963235 + G 76 -4.6 -5.011 | TGTTGCAGTTATACT GGCGCT AATT GGTGCC TTTTATTATTTACGT Neut_0935 961973 - 963418 + | NADH dehydrogenase subunit N Neut_0936 964540 - 963440 - | putative membrane-bound dehydrogenase oxidoreductase protein Neut_0937 964647 - 966569 + | heat shock protein 90 TERM 714 966683 - 966711 + F 100 -14.7 -4.18018 | opp_overlap 966686, overlap 966686 CAACGAGATGTTACT CAAGGCAGTGC TTACCGT GCACTGCCTTG TTTTGCCTAAAAAAA TERM 715 966686 - 966708 + F 88 -10.6 -4.21812 | opp_overlap 966686, overlap 966683 CGAGATGTTACTCAA GGCAGTGC TTACCGT GCACTGCC TTGTTTTGCCTAAAA TERM 716 966708 - 966686 - f 76 -10.6 -3.07443 | opp_overlap 966686 966683 CGAGATGTTACTCAA GGCAGTGC TTACCGT GCACTGCC TTGTTTTGCCTAAAA Neut_0938 966906 - 967946 + | WD40 domain-containing protein TERM 717 968026 - 967991 - f 100 -15.6 -3.62597 | opp_overlap 967987 GCCACTTTTCAATAA TACAGAGAGCTCCAAA TTTA TTTGGGGCTCCCTGTA CAAATACTTCAGCCT Neut_0939 968204 - 968626 + | transposase, IS4 family protein TERM 718 970434 - 970417 - g 74 -4.9 -4.89521 | gap 1 ACAGTTGAAAGAAAA TCTGAGCA AAC TGC-CAGA AGTAAGTAAAGTGGT Neut_0940 968840 - 971482 + | hypothetical protein Neut_0941 972168 - 971518 - | DedA family protein TERM 719 972310 - 972282 - R 100 -9.6 -5.64873 | opp_overlap 972282 CTGAACAATAAAAAA GGCACTTGCCCA TTTTC TGACCAAGTGCC TGTGTCTGGTAGGCC Neut_0942 974690 - 972459 - | hypothetical protein TERM 720 973768 - 973751 - G 77 -9.9 -3.73008 | TGTAAAGAGACAGAA CCAATGC CATA GCATTGG TAAGCATGGAGCCCT TERM 721 975006 - 975025 + G 74 -4.2 -4.86731 | overlap 975009 ATATCATTTCTATGG TGACCTGG TTTG CCGGGTTG TTTTATTTGCCCAGG TERM 722 975009 - 975022 + G 73 -5.9 -4.54026 | overlap 975006 TCATTTCTATGGTGA CCTGG TTTG CCGGG TTGTTTTATTTGCCC Neut_0943 974969 - 975382 + | hypothetical protein def 975934 - 975404 - | peptide deformylase TERM 723 975902 - 975912 + g 79 -6.8 -4.73388 | overlap 975901 AGGCTGCAACAGGCG TGGG TCC CCCA TTTTTAATACGGGTT Neut_0945 976673 - 975927 - | 5'-methylthioadenosine phosphorylase Neut_0946 978940 - 976793 - | DNA ligase, NAD-dependent TERM 724 978913 - 978931 + g 83 -5.2 -5.16237 | overlap 978915 AATAGAAATAGATTG CGCGGAGA GAG TTTCCGGG TTTTTTCATAAACTT Neut_0947 979003 - 979692 + | protein of unknown function, Spy-related TERM 725 979770 - 979820 + T 93 -12.8 -3.51232 | gap 1, overlap 979766 CTGACTACGGCTCTT TATGGCTGGCTGAAGGAT-CCCG ATAAAA CGGATATTCTTCAGTCAGCCGTA TTCATTTCAGCCCCA Neut_0948 980430 - 980059 - | flagellar protein FliT Neut_0949 980897 - 980427 - | flagellar protein FliS Neut_0950 982397 - 980955 - | flagellar hook-associated 2 domain-containing protein TERM 726 981054 - 981065 + g 74 -3.6 -4.98255 | opp_overlap 981041 CAGCGCGGTGAATTG CGCT CGCA GGCG TTTTTCTACTTCCCC TERM 727 982760 - 982776 + r 76 -6.5 -4.4648 | opp_overlap 982739 AAGGGTACCTTAGAG CCAGCGT CGT ACTCTGG TTTTGTAGTCCCGAT Neut_0951 983224 - 982754 - | hypothetical protein TERM 728 983738 - 983763 + G 77 -12 -3.15379 | overlap 983736 GGTAACTTGGAGTCT TCCTTAGCAC CGATCA GTGCTAAGGA TCTGTTGAATTATCT Neut_0952 983654 - 983929 + | hypothetical protein TERM 729 983952 - 983968 + T 93 -9.4 -5.03145 | opp_overlap 983952 TGTTTACATAAAAAA GGCCTG TTAAT CAGGCC TTTTTTAGCCACTTC TERM 730 983968 - 983952 - T 100 -9.4 -5.36441 | opp_overlap 983952 TGTTTACATAAAAAA GGCCTG TTAAT CAGGCC TTTTTTAGCCACTTC Neut_0953 984943 - 983993 - | glutathione synthetase Neut_0954 986250 - 984940 - | glutamate--cysteine ligase rplU 986449 - 986760 + | 50S ribosomal protein L21 rpmA 986773 - 987030 + | 50S ribosomal protein L27 TERM 731 987086 - 987066 - f 100 -11.2 -5.04385 | opp_overlap 987066 GATAGCTGGAAAAAA GCCCCATT GCTTG AATGGGGC TTTTTATTTTGTATA TERM 732 987066 - 987086 + F 100 -11.2 -5.58522 | opp_overlap 987066 GATAGCTGGAAAAAA GCCCCATT GCTTG AATGGGGC TTTTTATTTTGTATA TERM 733 987197 - 987245 + G 71 -6.8 -4.15222 | gap 2, opp_overlap 987209, overlap 987211 AGTAAAAATACAGGT CTTTGCA-GGAGATGGC-GGCAAC GGT GTTGCCAGCTTTCGCCGTGAAAAG TTTATTCCCAAAGGT TERM 734 987839 - 987853 + G 70 -4.2 -4.63486 | overlap 987834 987834 TGCTGCGGAAGGGGC CGGTCT CGG ACACCG TTTTCTTAAACACCT obgE 987165 - 988196 + | GTPase ObgE Neut_0958 988202 - 989323 + | gamma-glutamyl kinase Neut_0959 989374 - 990375 + | alpha/beta hydrolase fold TERM 735 991646 - 991634 - g 70 -9.1 -3.53012 | opp_overlap 991626 991625 GTCGTTCTCGCGAAA CCGGT GGC ACCGG TCTCGGACTTGCTAT Neut_0960 990472 - 991788 + | periplasmic sensor signal transduction histidine kinase Neut_0961 992145 - 992387 + | RNA chaperone Hfq Neut_0962 992389 - 993522 + | small GTP-binding protein TERM 736 993886 - 993865 - g 90 -12.3 -3.99957 | opp_overlap 993872, overlap 993868 993872 GTAAACATGTAGAAA CAACGCAGC CTGG GCTGCGCTG GCATGTTCCTTCACC TERM 737 993883 - 993868 - g 84 -10.4 -4.10791 | opp_overlap 993872, overlap 993865 993872 AACATGTAGAAACAA CGCAGC CTGG GCTGCG CTGGCATGTTCCTTC TERM 738 994591 - 994576 - g 76 -7.6 -4.32034 | CTAGTACCAGCAAAA TCCTGA TTGA TCAGGA AAAAGGAGGAGGGAA Neut_0963 993579 - 994769 + | HflK protein Neut_0964 994769 - 995647 + | HflC protein Neut_0965 995776 - 995961 + | hypothetical protein hisZ 996042 - 997214 + | ATP phosphoribosyltransferase regulatory subunit TERM 739 997215 - 997195 - f 75 -8.3 -3.71917 | opp_overlap 997182 997181, overlap 997181 ATGGCAAATGGGAAA TTTGCCCTG TTT CAGGGTAAA CAGACATCTGTAGTA TERM 740 997282 - 997315 + F 100 -22.7 -4.13304 | opp_overlap 997286, overlap 997286 997313 TTGGAAGAATATGTC TAAAGCACCACGCTG TAAA CAGCGTGGTGCTTTA TTTTGGAAATAATTT TERM 741 997286 - 997311 + F 100 -19.1 -4.65933 | opp_overlap 997286, overlap 997282 AAGAATATGTCTAAA GCACCACGCTG TAAA CAGCGTGGTGC TTTATTTTGGAAATA TERM 742 997311 - 997286 - f 100 -19.1 -3.62176 | opp_overlap 997282 997286 AAGAATATGTCTAAA GCACCACGCTG TAAA CAGCGTGGTGC TTTATTTTGGAAATA TERM 743 997788 - 997774 - g 70 -10 -3.29273 | overlap 997772 CTTACGAGGACAAGA TTGCGC GGC GCGCAA TACGTCTGCAGGATC TERM 744 997947 - 997932 - g 87 -7.6 -5.03145 | GAATGTCTGAAAAAA GCTGAA AGAA TTCAGC CAATGGTCGCAGATG Neut_0967 997350 - 998648 + | adenylosuccinate synthetase Neut_0968 999033 - 998716 - | hypothetical protein Neut_0969 999509 - 999213 - | hypothetical protein TERM 745 999643 - 999675 + r 81 -9.9 -3.9644 | opp_overlap 999642 GCTATGCGACAAATT GCCGCTGCTAC AAGAAAAGTAG GTGGCAGCGGC TTCTTGTCTTCAGGA Neut_0970 1002060 - 999685 - | ATP-dependent protease La TERM 746 999855 - 999878 + g 82 -3.8 -5.30155 | gap 1, opp_overlap 999857 GCAGCACGGTTTGAA TACCGGC-GCG TTG TGCTGCCAGTA TTTTTTCCTTGATAC TERM 747 1001496 - 1001506 + g 71 -6.8 -4.17023 | TATCAATTGTTTCCA GCAG CGC CTGC TTTTCAGCTACTTCA Neut_0971 1002659 - 1002210 - | signal-transduction protein TERM 748 1002580 - 1002558 - G 70 -10.6 -2.9059 | overlap 1002557 ATCGATCACAATAAG CGCGCCAACA TGA TATTGGCGCA TCATCCTGGCCGCTT Neut_0972 1003210 - 1002707 - | hypothetical protein Neut_0973 1003613 - 1004713 + | hypothetical protein Neut_0974 1004713 - 1005402 + | ABC transporter-related protein TERM 749 1005576 - 1005556 - f 76 -7.7 -4.18506 | TCACCTGGAAAATAA TTTTTAGAG GTA CCCTAAAAA ATCATCATGAAAATT Neut_0975 1005583 - 1006542 + | secretion protein HlyD family protein Neut_0976 1008567 - 1006756 - | sodium/hydrogen exchanger TERM 750 1006844 - 1006856 + g 74 -4.1 -4.93365 | GGTTCCGTTTTATAT TTGTC ATT GGCAA TTTTTAATTGTCCGG TERM 751 1007480 - 1007470 - G 70 -3.2 -4.81843 | AATAATTAAAATAAA TACC AGC GGCA CCAAGGCGTCAGCAC Neut_0977 1008937 - 1009623 + | hypothetical protein TERM 752 1009928 - 1009944 + T 77 -5.1 -4.94972 | opp_overlap 1009930, overlap 1009930 CTCAATTCTCGTCAA TACAAGG GTT CCTTGGA TTTTTACTTATCCTG Neut_0978 1011026 - 1010064 - | integrase catalytic subunit TERM 753 1010561 - 1010546 - G 74 -2.5 -5.08601 | GGAGTTGAACAAAAA CGAAC TTTGAT GTCCG GTCAATGGCTACAAA Neut_0979 1012598 - 1011147 - | pyruvate kinase Neut_0980 1012930 - 1012598 - | hypothetical protein Neut_0981 1013267 - 1013554 + | hypothetical protein Neut_0982 1013573 - 1013800 + | hypothetical protein Neut_0983 1014624 - 1013797 - | integrase catalytic subunit TERM 754 1014631 - 1014643 + r 93 -4.8 -5.48213 | opp_overlap 1014615 1014627, overlap 1014629 CCGGCACATCAGGCC GACC GGGTA GGTC TTTTTCTTTTGGGTG Neut_0984 1014968 - 1014672 - | transposase IS3/IS911 family protein TERM 755 1015043 - 1015086 + r 100 -20 -3.98113 | opp_overlap 1015049, overlap 1015038 1015044 ATCAATTTTTGGTTG ATTACATCCTCTTTGTTGAT TTGA ATCAACAAAGAGGATGTAAA TTTAGTTCATCATTG TERM 756 1015044 - 1015085 + r 100 -23.5 -2.98145 | opp_overlap 1015049, overlap 1015038 1015043 TCAATTTTTGGTTGA TTACATCCTCTTTGTTGAT TTGA ATCAACAAAGAGGATGTAA ATTTAGTTCATCATT TERM 757 1015080 - 1015049 - R 100 -17.6 -2.78384 | opp_overlap 1015038 1015044 1015043 TTTTGGTTGATTACA TCCTCTTTGTTGAT TTGA ATCAACAAAGAGGA TGTAAATTTAGTTCA TERM 758 1015291 - 1015279 - R 73 -9.1 -3.55801 | opp_overlap 1015279 1015277, overlap 1015280 1015282 ACTAACTTTCTGAAA GCAGC ACA GCTGC TATTTGCTACTATGC TERM 759 1015279 - 1015291 + r 73 -9.1 -3.49482 | opp_overlap 1015279 1015280 1015282, overlap 1015277 ACTAACTTTCTGAAA GCAGC ACA GCTGC TATTTGCTACTATGC Neut_0985 1015909 - 1015463 - | transposase, IS4 family protein TERM 760 1017550 - 1017564 + G 70 -4.2 -4.63218 | AGGTGAGCAGATAGT GCTGGA TGG TGCAGC TTTTCTTACCGACGG Neut_0987 1016537 - 1017628 + | RND family efflux transporter MFP subunit Neut_0988 1017625 - 1020711 + | acriflavin resistance protein Neut_0989 1022203 - 1020719 - | alpha amylase, catalytic region TERM 761 1021454 - 1021426 - G 74 -4.5 -4.87665 | overlap 1021432 CTTCAGCCAGAAAAA GGAAACCCGGAAA TTG TTTGCGGACTGCC TGAATGGTGGCAGGC Neut_0990 1023202 - 1022363 - | short-chain dehydrogenase/reductase SDR TERM 762 1023130 - 1023118 - G 76 -6.9 -4.56597 | GGGCGGTGGCAAAAA CACGG TAA CCGCG CGTCTGCAATTCATG Neut_0991 1023856 - 1023263 - | hexapaptide repeat-containing transferase TERM 763 1023319 - 1023336 + g 87 -8.5 -4.81852 | opp_overlap 1023313 TTCTGAATACGCTTA TACCCTT GTAC AAGGGTA TTTTGTTGGTTCTGG TERM 764 1023832 - 1023842 + g 78 -2.4 -5.32882 | GGACGATCGGCTGAT CACC CGT GGGG TTTTTTCTAATCATG Neut_0992 1023887 - 1024363 + | glutathione peroxidase Neut_0993 1024386 - 1024958 + | 3-methyladenine DNA glycosylase Neut_0994 1025523 - 1025140 - | signal transduction protein Neut_0995 1025930 - 1025520 - | signal transduction protein Neut_0996 1026409 - 1026029 - | hypothetical protein TERM 765 1026116 - 1026128 + g 100 -3.3 -5.93809 | GGATATGCTCAAAGC CGTGG TCT CGACG TTTTTTTTATCCGGG TERM 766 1026565 - 1026575 + G 70 -2.4 -5.00616 | opp_overlap 1026558 ACAGGAAATCGCCGA GCGC GAT GCAC TTTTTTCACCGGGAA Neut_0997 1026443 - 1027063 + | ribosomal RNA methyltransferase RrmJ/FtsJ TERM 767 1027904 - 1027890 - g 76 -2.8 -5.06451 | opp_overlap 1027892, overlap 1027892 GAGCAGGCGAAAAAA CATGCA CCT TGCATT ATCTTCATTGACGAG Neut_0998 1027155 - 1029083 + | ATP-dependent metalloprotease FtsH TERM 768 1029139 - 1029108 - g 80 -11.7 -3.35073 | opp_overlap 1029108 AGTATTCTTAATTAA TGGCCTGTACG GGAAATAAAA CGTACAGGCCA TTTTTTCTTATCCAA TERM 769 1029108 - 1029139 + G 100 -11.7 -5.55769 | opp_overlap 1029108 AGTATTCTTAATTAA TGGCCTGTACG GGAAATAAAA CGTACAGGCCA TTTTTTCTTATCCAA Neut_0999 1029107 - 1030009 + | dihydropteroate synthase TERM 770 1030867 - 1030879 + G 71 -7.7 -4.07885 | ACCCATATCATGACG CTGCA AGG TGCAG TTTTGCAACACGGTG Neut_1000 1030177 - 1031553 + | phosphoglucosamine mutase Neut_1001 1031674 - 1032687 + | phosphate binding protein TERM 771 1033538 - 1033560 + G 76 -11.2 -3.27704 | overlap 1033533 TTTATCTGGTGGGAG CAGGCCCGGG AGA CCCGGATCTG TTGACTTTCCGCGCT TERM 772 1033919 - 1033930 + G 78 -5.8 -4.82901 | CCCACCGGGATTACG CGCA TTCC TGCG TTTTTGTAACCGGAC Neut_1002 1032865 - 1034295 + | uroporphyrin-III C-methyltransferase Neut_1003 1034571 - 1034332 - | hypothetical protein Neut_1004 1035789 - 1034587 - | putative inner membrane protein TERM 773 1035771 - 1035788 + g 72 -3.5 -4.88288 | gap 1, overlap 1035775 CCAGATACTGATATT TGAAGTTG TAC CAACT-CA TTTTCTATTCTTTTG Neut_1005 1037388 - 1036486 - | hypothetical protein Neut_1006 1038301 - 1037399 - | Rossmann fold nucleotide-binding protein-like Neut_1007 1039714 - 1038590 - | ABC-2 type transporter Neut_1008 1040868 - 1039720 - | ABC-2 type transporter Neut_1009 1042649 - 1040865 - | ABC transporter-related protein TERM 774 1041077 - 1041054 - G 73 -11.8 -2.54745 | gap 1, opp_overlap 1041055, overlap 1041053 1041052 TTCATCCATAAAATG GGTGGTCACCA TAA TGGTGACC-CC TTTACGCGCTAGACC TERM 775 1041055 - 1041077 + g 82 -12 -3.55444 | opp_overlap 1041054 1041053 1041052 TCATCCATAAAATGG GTGGTCACCA TAA TGGTGACCCC TTTACGCGCTAGACC TERM 776 1042420 - 1042399 - G 74 -6.5 -4.33274 | gap 1, overlap 1042400 GTCACAGTATCAAAA CCGGCCA-GC GTG GCATGGCCGC TATCCGGTTTGAGTA TERM 777 1042419 - 1042400 - G 70 -10 -3.19482 | gap 1, overlap 1042399 TCACAGTATCAAAAC CGGCCA-GC GTG GCATGGCCG CTATCCGGTTTGAGT Neut_1010 1043679 - 1042639 - | hypothetical protein TERM 778 1043228 - 1043250 + g 80 -10.6 -3.65351 | TCTACATCTTGCTGA CTGCTGGCTT TGG AAGGCAGCAG TTTACGTGCACGTGC Neut_1011 1044373 - 1043765 - | transcriptional regulator, TetR family protein TERM 779 1044677 - 1044640 - R 100 -22.9 -2.53263 | GTCACTTCCAACGGA TTGAGTAGCGCCCGGTC ACCC GACTGGGCGCTACTCAA TCCCGGCGCGCTCCA TERM 780 1044942 - 1044924 - R 77 -7.4 -4.34345 | GATACATCATCAAAA TTCGAGCA GTT TGCGCGAA CATGAGATTTTCCTT Neut_1012 1045360 - 1045070 - | CRISPR-associated Cas2 family protein TERM 781 1045269 - 1045323 + g 74 -7.9 -4.19177 | gap 1, opp_overlap 1045285, overlap 1045274 TTTTGCACACGCTGC CCGATGCT-TTCGCAAACTTTTGCGA TTCG TCGCAATCGTTTGCGGCCAGCTTTGG TTTCTGTTGAAACGT TERM 782 1045274 - 1045318 + g 74 -7.2 -4.21322 | gap 1, opp_overlap 1045285, overlap 1045269 CACACGCTGCCCGAT GCT-TTCGCAAACTTTTGCGA TTCG TCGCAATCGTTTGCGGCCAGC TTTGGTTTCTGTTGA Neut_1013 1046397 - 1045363 - | CRISPR-associated Cas1 family protein Neut_1014 1047040 - 1046414 - | CRISPR-associated Cas4 family protein Neut_1015 1047962 - 1047048 - | CRISPR-associated Csd2 family protein Neut_1016 1049668 - 1047968 - | CRISPR-associated RAMP Csd1 family protein TERM 783 1048740 - 1048728 - G 79 -5.5 -5.00895 | CCCAGCACATAAAAA GGAGT ATC ACCCC CCTCATTGGAAAATG TERM 784 1048982 - 1048997 + g 77 -10.4 -3.54488 | overlap 1048981 AGCATGTTTGCCAAC GGGTGC ATTG GCACCC TGTTCTTTGGCAAAA TERM 785 1050094 - 1050080 - H 71 -10 -2.82895 | opp_overlap 1050066 1050079 1050079, overlap 1050063 1050060 1050059 1050079 TCGCGCAGGAATAAC CCAGCA CGT TGCTGG CGTTCATTCTCAATG TERM 786 1051868 - 1051880 + H 80 -5.5 -5.03145 | GGGAAAACATTCCCG GTGCA AGC TGCGC TTTTTTCCGGCATTG TERM 787 1053958 - 1053929 - g 74 -12.2 -2.73468 | GAAGACTGGGAATTA CTGCGCCAGACC GGCTGT GATCTGGCGCAA GGCAACTTTATTGCG Neut_1019 1052828 - 1054075 + | response regulator receiver modulated diguanylate phosphodiesterase Neut_1020 1054638 - 1054108 - | dihydrofolate reductase thyA 1055429 - 1054635 - | thymidylate synthase TERM 788 1054940 - 1054922 - G 76 -7.4 -4.30809 | GAACACCCAGGAAAA TATCCGCG CTG CGCTGATA AAGTTGGCAGGAGAG TERM 789 1055495 - 1055511 + H 70 -9.5 -2.93853 | opp_overlap 1055493, overlap 1055494 ATTGAATAGTACAGG TGGCTTT TTT AAAGCCA GTTTACTTAAAAAAA TERM 790 1056128 - 1056116 - g 91 -3.3 -5.80003 | overlap 1056117 1056118 TGAACAAATAAAAAA GCTGG CTG CCAGT GAAAACTGGCAATAC Neut_1022 1055529 - 1057025 + | leucyl aminopeptidase Neut_1023 1057057 - 1057374 + | putative lipase Neut_1024 1058501 - 1057413 - | sulfate ABC transporter, ATPase subunit TERM 791 1058298 - 1058272 - G 82 -3.6 -5.26119 | opp_overlap 1058272 1058276 TGCTGAAAAACAAAA CCAACATGGCGG TCA CGGACATGTTTG GTAGTTGAATCTTCC Neut_1025 1059382 - 1058513 - | sulfate ABC transporter, inner membrane subunit CysW Neut_1026 1060223 - 1059390 - | sulfate ABC transporter, inner membrane subunit CysT TERM 792 1060321 - 1060311 - R 82 -8.2 -4.56597 | opp_overlap 1060317 TGCCTGTCCTAAAAA CCGC CCT GCGG ATAATACATATCCGC Neut_1027 1060561 - 1060304 - | hypothetical protein Neut_1028 1061565 - 1060558 - | sulfate ABC transporter, periplasmic sulfate-binding protein Neut_1029 1063078 - 1061594 - | hypothetical protein TERM 793 1061644 - 1061633 - G 89 -2.2 -5.71712 | gap 1, overlap 1061634 TTCTACATAAAAAAA GTCCG TAC CGG-C AGTTGTTTCTCCTAG TERM 794 1063373 - 1063396 + H 77 -2.4 -5.44119 | gap 1, overlap 1063368 1063376 GCTTTTTGTTGCTGC TCGTGCTGCTT TGT AGGCCGCA-GA TTTTTTTCGAATAAA TERM 795 1063899 - 1063884 - H 100 -7.6 -5.55769 | TGGTAGAAGAAAAAA TGGCTT GGAT AAGCCA TATCCAGCTGAAATA TERM 796 1063908 - 1063919 + H 70 -3 -5.01422 | TAAGCCATATCCAGC TGAA ATAT TTCA TTTGTTTTTATCTGA TERM 797 1063960 - 1063944 - H 71 -5.1 -4.54821 | overlap 1063946 ATCTGAAGCAGAAAA TCTCTTC CCA GAAGGGA GAATACAAGTTGTCG TERM 798 1064488 - 1064506 + H 86 -8.2 -4.74103 | GAATGGCGAGCATTT CATTACTC GTA GGGTAATG TTTTTCCGTTCAAAG Neut_1031 1065284 - 1066126 + | RNA polymerase factor sigma-32 TERM 799 1066151 - 1066179 + T 93 -9.6 -5.16237 | opp_overlap 1066155, overlap 1066153 TATGTAATCTCCTGA TAGATGGCCGTA TTGCT TGCGGCCATCAA TTTTTTAATGCAGTT TERM 800 1066153 - 1066177 + T 79 -12.2 -2.80472 | opp_overlap 1066155, overlap 1066151 TGTAATCTCCTGATA GATGGCCGTA TTGCT TGCGGCCATC AATTTTTTAATGCAG Neut_1032 1066889 - 1066176 - | glutamine amidotransferase class-I Neut_1033 1067151 - 1068545 + | hypothetical protein Neut_1034 1068545 - 1069975 + | GTP-binding protein, HSR1-related Neut_1035 1071952 - 1069970 - | lipopolysaccharide biosynthesis TERM 801 1070021 - 1070054 + g 73 -10.4 -3.23715 | overlap 1070020 GTTTATTGCTTCGAT CGGCTGCTTG-GCTCC CGGT GGAGCATAAGC-GCCG TATTCTGACAGTTCT Neut_1036 1074976 - 1072175 - | phosphoenolpyruvate carboxylase TERM 802 1073850 - 1073864 + g 71 -6.4 -4.35461 | TCGGCGCTGTCAGCA TACGGT TCT GCCGTA TTTTCCTGGTATTGC TERM 803 1074036 - 1074060 + g 83 -2.7 -5.38249 | overlap 1074049 ACTTTGATCAGGCGT TCAGTCAGACT CAT GGCCTGGCCGA TTTTTTCTACTTCCT TERM 804 1075511 - 1075543 + G 77 -11.9 -3.09834 | opp_overlap 1075503 CGAGAATCCCAGTTA CGGGCGCGCTTCCCG CAT CTGCAAGTGCGTCCG TTGCGTGGTAACGTG TERM 805 1075999 - 1075989 - g 74 -6.8 -4.28049 | overlap 1075990 1075993 CGCAAAACCTGAAAA CGCA CGG TGCG GAAGAGATTCTTGCC hemC 1075100 - 1076026 + | porphobilinogen deaminase Neut_1038 1076046 - 1076828 + | uroporphyrinogen-III synthase Neut_1039 1076843 - 1077871 + | protein of unknown function DUF513, hemX Neut_1040 1077868 - 1079049 + | HemY domain-containing protein Neut_1041 1080102 - 1079056 - | CDP-6-deoxy-delta-3,4-glucoseen reductase TERM 806 1079217 - 1079236 + g 100 -10.7 -5.26875 | opp_overlap 1079217 CCATGTCTTCCATAA CGGCCTG ATGTAC CAGGCCG TTTTTTCCTTGCCAG TERM 807 1079236 - 1079217 - G 76 -11.4 -3.29144 | opp_overlap 1079217 CCATGTCTTCCATAA CGGCCTGA TGTA CCAGGCCG TTTTTTCCTTGCCAG Neut_1042 1080134 - 1081039 + | NAD-dependent epimerase/dehydratase Neut_1043 1081099 - 1082319 + | type II secretion system protein Neut_1044 1082363 - 1083223 + | prepilin peptidase Neut_1045 1083227 - 1083838 + | dephospho-CoA kinase Neut_1046 1083911 - 1084666 + | hypothetical protein Neut_1047 1084683 - 1084877 + | hypothetical protein Neut_1048 1086279 - 1084945 - | N-acetylglutamate synthase Neut_1049 1087064 - 1086303 - | hypothetical protein Neut_1050 1087162 - 1087719 + | redoxin domain-containing protein Neut_1051 1087722 - 1088525 + | inositol monophosphatase Neut_1052 1090205 - 1088619 - | Bilirubin oxidase Neut_1053 1090448 - 1092187 + | hypothetical protein Neut_1054 1092233 - 1092568 + | putative NrfJ Neut_1056 1093036 - 1093482 + | transposase, IS4 family protein Neut_1057 1093894 - 1094784 + | O-methyltransferase family protein Neut_1058 1095262 - 1094948 - | hypothetical protein Neut_1059 1096358 - 1095543 - | methyltransferase type 11 Neut_1060 1097369 - 1096410 - | Beta-lactamase Neut_1061 1097980 - 1097366 - | methyltransferase type 12 TERM 808 1097503 - 1097526 + g 70 -9.6 -3.18849 | overlap 1097502 1097504 TTCCAAGCGTGCTGT GGTACATGGG AGGT CCCATGTACG TGTTACTGATCTCGG TERM 809 1097504 - 1097525 + g 75 -13.1 -2.50988 | overlap 1097503 1097502 TCCAAGCGTGCTGTG GTACATGGG AGGT CCCATGTAC GTGTTACTGATCTCG Neut_1062 1098581 - 1098090 - | hypothetical protein TERM 810 1098634 - 1098687 + r 74 -11.1 -2.52543 | GCCTGAGCTCAGCTG CGTTTGAGGCGGTGACCATTTTTGC GGCA GCAAAAATGGGCGGCGGGTCAAATG TCAGTTGCAGCGACT Neut_1063 1099585 - 1099145 - | pyrimidine dimer DNA glycosylase Neut_1064 1100088 - 1099591 - | TspO and MBR like proteins TERM 811 1099862 - 1099833 - G 71 -7.7 -3.98256 | opp_overlap 1099832 1099833, overlap 1099831 GTTGCACCAAAAAGA GGATCAGTGGCGC ACGG GCGGCACGGAACC CTTTGGCACGCCAGA Neut_1065 1100280 - 1100131 - | integrase, catalytic region Neut_1066 1100457 - 1100753 + | transposase IS3/IS911 family protein TERM 812 1100794 - 1100782 - f 93 -4.8 -5.48213 | opp_overlap 1100782 1100792, overlap 1100784 CACCCAAAAGAAAAA GACC TACCC GGTC GGCCTGATGTGCCGG Neut_1067 1100801 - 1101628 + | integrase catalytic subunit Neut_1068 1102190 - 1101825 - | putative transposase TERM 813 1102721 - 1102736 + G 74 -2.5 -5.10208 | TTTGTAGCCATTGAC CGGAC ATCAAA GTTCG TTTTTGTTCAACTTC Neut_1069 1102298 - 1103218 + | integrase catalytic subunit Neut_1070 1103528 - 1103175 - | transposase IS3/IS911 family protein TERM 814 1103254 - 1103268 + g 78 -10 -3.87925 | overlap 1103249 CTGTTCAACTTGTTG TCAGCC ACT GGCTGA TTATGTTTGCTGGTT TERM 815 1103624 - 1103609 - R 73 -9 -3.53224 | opp_overlap 1103611 1103612, overlap 1103612 CATCTCTTTCGCAAA GAAGGC GCTC GCCTTC ATCCAGGCGAGTACC TERM 816 1103639 - 1103612 - R 79 -9.1 -3.90744 | opp_overlap 1103611 1103612, overlap 1103609 CTCTTTCGCAAAGAA GGCGCTCGCCT TCATCC AGGCGAGTACC ATTTGCCACTTGTTC TERM 817 1103666 - 1103688 + r 74 -9.8 -3.36273 | GTTCCTGCTCTCGTT TCCAGCGCCG TAC CTGCGTTGGA TTGATATTAACCACC Neut_1071 1104983 - 1104006 - | alcohol dehydrogenase TERM 818 1104051 - 1104063 + g 76 -3.3 -5.12617 | CGATGATTGTAGGCT TGCTG TTG CCGCA TTTTTTACATCATTC Neut_1072 1105874 - 1105098 - | short-chain dehydrogenase/reductase SDR TERM 819 1105577 - 1105590 + g 74 -9.5 -3.61715 | TTTCTCGCCCCGCGC CGCCG CCTC CGGCG TTGTTGACCAAGATG TERM 820 1105695 - 1105724 + g 86 -8.5 -4.62302 | GATAGCCAACGCCTG GCCGCCATTGGAA GTAA TTTCATCGGCGGC TTTTTGGGCGTCTTC Neut_1073 1107549 - 1105879 - | 6-aminohexanoate-dimer hydrolase TERM 821 1107766 - 1107744 - H 74 -9.8 -3.36273 | GGTGGTTAATATCAA TCCAACGCAG GTA CGGCGCTGGA AACGAGAGCAGGAAC TERM 822 1107793 - 1107820 + H 79 -9.1 -3.90744 | opp_overlap 1107792 1107793, overlap 1107808 GAACAAGTGGCAAAT GGTACTCGCCT GGATGA AGGCGAGCGCC TTCTTTGCGAAAGAG TERM 823 1107808 - 1107823 + H 73 -9 -3.53224 | opp_overlap 1107793 1107792, overlap 1107793 GGTACTCGCCTGGAT GAAGGC GAGC GCCTTC TTTGCGAAAGAGATG TERM 824 1108178 - 1108164 - g 78 -10 -3.87925 | overlap 1108159 AACCAGCAAACATAA TCAGCC AGT GGCTGA CAACAAGTTGAACAG Neut_1074 1107904 - 1108587 + | integrase catalytic subunit Neut_1075 1108863 - 1109012 + | integrase, catalytic region Neut_1076 1112512 - 1109327 - | AAA ATPase TERM 825 1110885 - 1110906 + g 73 -5.2 -4.74103 | gap 1, opp_overlap 1110885 TCTGCTACGAATTTA CCCAG-TTG GATGG CAATCTGGG TTTTTGGATTAGCGG TERM 826 1110967 - 1110935 - G 73 -11.1 -2.9348 | opp_overlap 1110935 1110933, overlap 1110926 GGGAAACTCGATAGA GCGGATAGCGATCGC CGT GCGTCCGCTTGCCGC TGTTTGTAGTTTATT TERM 827 1110935 - 1110967 + g 73 -8.9 -3.68727 | opp_overlap 1110926 1110935, overlap 1110933 GGGAAACTCGATAGA GCGGATAGCGATCGC CGT GCGTCCGCTTGCCGC TGTTTGTAGTTTATT TERM 828 1111005 - 1111015 + g 73 -5.4 -4.62069 | overlap 1111014 CTTGCCAGTGCACCT CCTT GTG AAGG TTTTTGGCATAAACC Neut_1077 1113497 - 1112514 - | hypothetical protein Neut_1078 1114812 - 1113502 - | hypothetical protein TERM 829 1113737 - 1113708 - G 85 -12.1 -3.66784 | overlap 1113710 GCATTTGTAATACAA GATCCTTGCGCCG ATCC CGGCGCCAGGATT CCGGATCCTGAAAAT TERM 830 1113735 - 1113710 - G 91 -14.7 -3.41292 | overlap 1113708 ATTTGTAATACAAGA TCCTTGCGCCG ATCC CGGCGCCAGGA TTCCGGATCCTGAAA TERM 831 1113926 - 1113904 - G 84 -4.9 -5.28942 | TATGTGAAATAAAAA TTGCTCG GCCTGACTG CGAGCAA CAGAAGAATCATCTT Neut_1079 1117417 - 1115033 - | sucrose synthase TERM 832 1116112 - 1116129 + g 73 -2.7 -5.00884 | opp_overlap 1116109, overlap 1116105 CCTGCCAGTAAATAT CCGAATG CAGA TATTTGG TTTTTTCCAGAGCGT TERM 833 1116324 - 1116341 + g 93 -4.1 -5.75945 | AAGCGTGAGATCCAT TGAGGAA TAAT TTCCCCA TTTTTTTTACGAAAT Neut_1080 1119566 - 1117428 - | sucrose-phosphate synthase TERM 834 1117983 - 1117994 + g 74 -2.2 -5.08011 | overlap 1117978 CAGGACGTCGGGCAT TGGT ACAT GCCA TTTTTTGAGAATTTT Neut_1081 1120506 - 1119577 - | ribokinase-like domain-containing protein TERM 835 1120577 - 1120555 - R 79 -9.2 -3.9122 | CACTCCCGGAAATAA TGCGGACAAA TTT TTTGTCCGAA GAAGTGTGTGCTGGT TERM 836 1120720 - 1120737 + r 73 -2.6 -5.1675 | overlap 1120721 GATTTGGAGACGCTT CCCGGA TTTTTT TCCGGA TTTTTTAATCGCTGG Neut_1082 1122801 - 1120702 - | excinuclease ABC subunit B TERM 837 1122275 - 1122287 + g 83 -5.5 -5.1861 | AACCGCTGGATGATG TCGCG TTG CGTGA TTTTTTCATGCTCAC Neut_1083 1122880 - 1124073 + | aminotransferase, class I and II Neut_1084 1124731 - 1124459 - | response regulator receiver protein TERM 838 1125228 - 1125214 - g 87 -4.2 -5.41746 | opp_overlap 1125216 1125221 1125222, overlap 1125216 AATTTTCTAAAAAAA TTCTGG CTG CCAGTA TCGTTCTGGCGTTTG Neut_1085 1125171 - 1126547 + | hypothetical protein TERM 839 1126597 - 1126626 + F 100 -15.9 -5.86061 | ATGTAACTCTTCTAA CTGGCAAGCAGTA ATGA TATTGCTTGCCAG TTTTTTTTGCTAAAA Neut_1086 1126679 - 1127047 + | hypothetical protein Neut_1087 1127186 - 1127878 + | peptidase C39, bacteriocin processing Neut_1088 1127903 - 1128403 + | hypothetical protein TERM 840 1129314 - 1129325 + G 79 -7.2 -4.43681 | AGCTACAGCGCCTAC GGGC AAAG GCCC TTTTGATATTAAATA Neut_1089 1128475 - 1129809 + | hypothetical protein Neut_1090 1130394 - 1129864 - | hypothetical protein TERM 841 1130138 - 1130151 + g 74 -3.8 -5.04868 | ATATAGGTCATTCCA GCTG CTTCGA CAGC TTTTCTTTCATTTGG Neut_1091 1130595 - 1131698 + | riboflavin biosynthesis protein RibD TERM 842 1132598 - 1132584 - g 74 -8.6 -4.0162 | opp_overlap 1132595 1132596 GGGCCACAGGATAAA CAGTTG CGG CAACTG GCCAGCCAGCTTGGT Neut_1092 1131804 - 1133024 + | glycosyl transferase, group 1 Neut_1093 1133125 - 1134447 + | UDP-glucose 6-dehydrogenase TERM 843 1134580 - 1134532 - f 100 -15.6 -3.78934 | gap 1, overlap 1134536 CTTGCTTCATAAGAA CAGACTCGTATTGCCGTTGTAGT TCTC AC-ACAACAGCAATACGAGCTTG CAATGCCCCGATTAC TERM 844 1134576 - 1134536 - f 100 -17.2 -3.31208 | gap 1, overlap 1134532 CTTCATAAGAACAGA CTCGTATTGCCGTTGTAGT TCTC AC-ACAACAGCAATACGAG CTTGCAATGCCCCGA Neut_1094 1134583 - 1134765 + | transposase and inactivated derivatives Neut_1095 1134821 - 1135078 + | hypothetical protein Neut_1096 1135634 - 1136911 + | glycosyl transferase, group 1 Neut_1097 1136923 - 1138278 + | putative CapK protein Neut_1098 1138900 - 1138280 - | exopolysaccharide synthesis, ExoD Neut_1099 1139179 - 1139658 + | hypothetical protein TERM 845 1139799 - 1139785 - g 70 -2.8 -4.87291 | CATCGGAAGGAAAAA TCGAAA TTC TCCCGA TTTCTGGTTTTCGCG Neut_1100 1139748 - 1140905 + | hypothetical protein TERM 846 1141580 - 1141603 + G 74 -9.6 -3.61764 | overlap 1141581 GCTGGGTTGGCGAGC TGTCTGGTCA TATC TGACCGGACG TTTAACGCTTGATCA Neut_1101 1140957 - 1141772 + | hypothetical protein TERM 847 1141881 - 1141891 + G 70 -2.4 -5.00616 | CTTTTCGTAAGTTTC AGCG TTG CGCG TTTTTTAACCGGGGC Neut_1102 1141791 - 1142864 + | permease YjgP/YjgQ family protein TERM 848 1143162 - 1143191 + G 79 -12.1 -3.32844 | CTCCTTTGATGATCA GCCTTGCCCCGAT TGGA ATCGGGGGGGGGC TTATCACCTCAACCA Neut_1103 1142864 - 1143922 + | permease YjgP/YjgQ family protein Neut_1104 1143939 - 1145156 + | CDP-alcohol phosphatidyltransferase Neut_1105 1145140 - 1146141 + | diacylglycerol kinase, catalytic region TERM 849 1146739 - 1146765 + G 70 -8 -3.74747 | overlap 1146728 TGCAGCTGAGCTGCG TGCTGAGCGC AAGGGAC GCGCTCAACA TTTAGTACAGCTTGA Neut_1106 1146155 - 1147123 + | hypothetical protein Neut_1107 1147184 - 1147831 + | hypothetical protein Neut_1108 1148318 - 1147842 - | hypothetical protein TERM 850 1151203 - 1151192 - g 70 -4.4 -4.64676 | CTATGCTCAACAAAA TCCT AAGC AGGA ATATAAAAGGGAAGC Neut_1109 1148790 - 1151519 + | preprotein translocase subunit SecA TERM 851 1151730 - 1151743 + G 76 -5.2 -4.77036 | opp_overlap 1151730 ATAACGGAAAGATGA GCGG GCGACG CCGC TTTTTACTGGTGGCC TERM 852 1151789 - 1151802 + G 91 -6.7 -5.11613 | GTGGTTGCTGGCGCG GGTGT GGCG ACACC TTTTTTGCGTAGTAT Neut_1110 1151699 - 1152304 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 853 1153011 - 1153000 - g 71 -7.2 -4.0056 | overlap 1152990 1152993 ACAAAGATCCACAAA CCGG GATC CCGG TCGATGGCATACCGT Neut_1111 1152306 - 1153553 + | cytochrome b/b6 domain-containing protein Neut_1112 1153550 - 1154254 + | cytochrome c1 Neut_1113 1154306 - 1154905 + | glutathione S-transferase domain-containing protein TERM 854 1155273 - 1155309 + G 70 -4.6 -4.63542 | gap 1, opp_overlap 1155274, overlap 1155274 TTTACAGAAAGACCA AGCTTTATC-CGTTG AAGGTAAA CAACGAGATAAAGCG TTTTTAAAAATTGTA Neut_1114 1154902 - 1155330 + | ClpXP protease specificity-enhancing factor TERM 855 1155323 - 1155335 + T 100 -3.5 -5.95539 | CGTTTTTAAAAATTG TAAAA TAG TTTTA TTTTTTTATTTGCCG Neut_1115 1155683 - 1155525 - | hypothetical protein Neut_1116 1156224 - 1155766 - | ISRm2011-2 transposase protein TERM 856 1156246 - 1156228 - R 77 -2.4 -5.33405 | TGTAGTAAACAAAAA TGGTCA GCAGCTT CGACCA GGCTCATCATTGAGC TERM 857 1156277 - 1156317 + r 100 -15.7 -3.9693 | gap 1 AGTAATCGTGACATT GCAAGCTCGTATTGCTGT TGAAAT ACAGCG-TACGAGCTTGC TTCTTTAAATCAATA Neut_1117 1156791 - 1156366 - | transcriptional regulators, TraR/DksA family protein TERM 858 1156508 - 1156526 + g 100 -7.5 -5.52986 | TCACCCTCGTCAATT TTGGTGA TGATT TCACCAA TTTTTTTGATCAGCT Neut_1118 1158871 - 1157153 - | adenylate/guanylate cyclase TERM 859 1157212 - 1157236 + gr 76 -5.7 -4.59424 | overlap 1157234 GGCTGGTTATCTGGA CGTAGCGGACA GCC TGTTTGTTGCG TTTTCCTTTCAGTTT Neut_1119 1159577 - 1158831 - | metal dependent phosphohydrolase TERM 860 1159018 - 1159033 + gr 80 -4.6 -5.14698 | opp_overlap 1159009, overlap 1159019 AGATTATTGGCAATG GCCAGC CAAA GCTGGA TTTTGTTTTCAGTTT TERM 861 1159019 - 1159032 + gr 70 -8.1 -3.66379 | opp_overlap 1159009, overlap 1159018 GATTATTGGCAATGG CCAGC CAAA GCTGG ATTTTGTTTTCAGTT TERM 862 1160030 - 1160006 - R 93 -9.3 -5.0133 | opp_overlap 1160006 GATTGGTGCAAAAAA GCCCCATCC ATATACA GGATGAGGC TTTTTTGAAGGCGGG TERM 863 1160006 - 1160030 + r 84 -7.1 -5.00616 | opp_overlap 1160006 GATTGGTGCAAAAAA GCCCCATCC ATATACA GGATGAGGC TTTTTTGAAGGCGGG Neut_1120 1160487 - 1160248 - | hypothetical protein Neut_1121 1162792 - 1161242 - | hypothetical protein Neut_1122 1163247 - 1162789 - | hypothetical protein Neut_1123 1163785 - 1163282 - | hypothetical protein TERM 864 1163837 - 1163817 - R 72 -6.7 -4.24599 | opp_overlap 1163818, overlap 1163812 1163818 AAGAAAAGAAGTAAA CGCCCGGCC GCT AACCGGGCT TTTTTTTTTGCCTGT TERM 865 1163836 - 1163818 - R 73 -10.2 -3.12319 | opp_overlap 1163818, overlap 1163817 1163812 AGAAAAGAAGTAAAC GCCCGGCC GCT AACCGGGC TTTTTTTTTTGCCTG TERM 866 1163818 - 1163836 + r 100 -8.8 -6.38039 | opp_overlap 1163817 1163812 1163818 AGAAAAGAAGTAAAC GCCCGG CCGCTAA CCGGGC TTTTTTTTTTGCCTG Neut_1124 1164103 - 1163867 - | hypothetical protein TERM 867 1163978 - 1163956 - G 93 -15.6 -3.16191 | TTATACGCTCACCAA GCTTGCACCG CTT CGGCGCAAGC CCTGCGACAGATAGC Neut_1125 1165593 - 1164412 - | phage integrase family protein TERM 868 1165635 - 1165648 + H 71 -2.3 -5.09173 | opp_overlap 1165619, overlap 1165619 GGTAAAAAATATATC CGGTT TTCT ACCCG TTTTTTGAAATGTTA Neut_1126 1166050 - 1166502 + | hypothetical protein Neut_1127 1168054 - 1166591 - | UbiD family decarboxylase ubiA 1169007 - 1168147 - | 4-hydroxybenzoate octaprenyltransferase TERM 869 1168620 - 1168606 - G 73 -2.8 -5.05782 | overlap 1168607 AGGCATGGCAAAAAA GCGTTT GGT AAACGG ATAGGAGATGGCAAG Neut_1129 1169550 - 1169086 - | chorismate lyase Neut_1130 1170088 - 1169690 - | response regulator receiver protein Neut_1131 1171662 - 1170253 - | cation transporter TERM 870 1170526 - 1170514 - G 91 -7.7 -5.17744 | ATAGACGAATAAAAA TGCCA GGA TGGCA AAAATAATTTCATTG TERM 871 1170537 - 1170550 + g 73 -5.3 -4.66264 | TGGCAAAAATAATTT CATTG GCGA CAATG TTTTTACCAATTTTA trkA 1173182 - 1171734 - | potassium transporter peripheral membrane component TERM 872 1172934 - 1172916 - G 73 -8.8 -3.72576 | opp_overlap 1172919 1172927, overlap 1172919 GGTGGGTGTATTAAA CAGGCTGG CGG CCAGCTTG CATGCAACCAGGTTG Neut_1133 1174723 - 1173449 - | hypothetical protein Neut_1134 1175347 - 1174856 - | outer membrane lipoprotein TERM 873 1176038 - 1176025 - g 89 -2.3 -5.71983 | opp_overlap 1176025 1176037 TGAAGTACAAAAAAA GGACG ATGC CGTTC CTGAATTTCAGGCTG Neut_1135 1175675 - 1176400 + | septum site-determining protein MinC Neut_1136 1176426 - 1177235 + | septum site-determining protein MinD Neut_1137 1177235 - 1177531 + | cell division topological specificity factor MinE Neut_1138 1177588 - 1178274 + | outer membrane lipoprotein LolB Neut_1139 1178299 - 1179135 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Neut_1140 1179312 - 1180262 + | ribose-phosphate pyrophosphokinase TERM 874 1180565 - 1180525 - g 76 -3.3 -5.08824 | overlap 1180526 CGTGGATGGAAAAAA GGAACAGGTACTTTTAC GTGATGT GCAAATGCACCCGTTCA AGCAGCAAGTACTGC Neut_1141 1180316 - 1180924 + | 50S ribosomal protein L25/general stress protein Ctc TERM 875 1180936 - 1180962 + F 100 -13.8 -3.84271 | overlap 1180937 1180939 CTGATTTTGTCTGAT GTACGCCAGAGA ATT TCTCTGGCGTAA TTCTTGCTATTCTGA TERM 876 1180937 - 1180961 + F 100 -17.3 -2.8984 | overlap 1180936 1180939 TGATTTTGTCTGATG TACGCCAGAGA ATT TCTCTGGCGTA ATTCTTGCTATTCTG TERM 877 1180939 - 1180959 + F 93 -15.5 -2.98778 | overlap 1180937 1180936 ATTTTGTCTGATGTA CGCCAGAGA ATT TCTCTGGCG TAATTCTTGCTATTC Neut_1142 1181029 - 1181616 + | peptidyl-tRNA hydrolase Neut_1143 1181671 - 1182762 + | translation-associated GTPase Neut_1144 1183271 - 1184683 + | isopropylmalate isomerase large subunit Neut_1145 1184710 - 1184844 + | entericidin EcnAB leuD 1184850 - 1185488 + | isopropylmalate isomerase small subunit Neut_1147 1185514 - 1186584 + | 3-isopropylmalate dehydrogenase Neut_1148 1186716 - 1187840 + | aspartate-semialdehyde dehydrogenase TERM 878 1189412 - 1189399 - g 74 -3.8 -4.99638 | ACATGTAGATAAAAA CAGC AAATGG GCTG CCGCAGGATTGGGGG TERM 879 1189498 - 1189477 - g 91 -8.7 -4.85782 | opp_overlap 1189481 TCTCCGAAAAAGAAA GCAATTCGG GGAC CCGGATTGC TCTGACATATATGAT TERM 880 1189616 - 1189589 - g 78 -4 -5.09685 | GAACATATAGAAAAA CCGGACGAAGAA TTGA TTCAGCGTACGG TCAGTACATCAGAAT TERM 881 1189985 - 1189958 - g 100 -10 -5.06414 | overlap 1189960 GCCCTGGAAGAAAAA TCTGATCTTGTG CAGG CACAAGATCATA GTGAAGTGCGTGCAT TERM 882 1189983 - 1189960 - g 77 -12.6 -2.77538 | overlap 1189958 CCTGGAAGAAAAATC TGATCTTGTG CAGG CACAAGATCA TAGTGAAGTGCGTGC Neut_1149 1187957 - 1190353 + | putative transmembrane protein Neut_1150 1190467 - 1191300 + | tRNA pseudouridine synthase A Neut_1151 1191312 - 1191938 + | N-(5'-phosphoribosyl)anthranilate isomerase Neut_1152 1191925 - 1193124 + | tryptophan synthase subunit beta trpA 1193177 - 1194001 + | tryptophan synthase subunit alpha TERM 883 1194189 - 1194203 + G 74 -4.2 -4.7497 | overlap 1194191 AATCGTATTTCTGCG CGCAAG CGT CTTGAG TTTTTACTGGATCCA Neut_1154 1194006 - 1194896 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit Neut_1155 1195022 - 1196308 + | FolC bifunctional protein TERM 884 1196370 - 1196406 + G 72 -8.6 -3.8969 | opp_overlap 1196369 1196381 ATTTCCCTGAGGAAG CGTGCCAGAAAGCGCC TGATC GGTGCTATCTTGCTCG TTATTGTGTCGGTAG Neut_1156 1196328 - 1196999 + | sporulation domain-containing protein Neut_1157 1196996 - 1197490 + | colicin V production protein TERM 885 1198677 - 1198652 - g 74 -7.7 -4.13995 | gap 1 TCGGCAGAAATTAAA TGCCATCGAAAT TGA ATTTCG-CGGCA AGAACGTACTGCTGG Neut_1158 1197597 - 1199114 + | amidophosphoribosyltransferase Neut_1159 1199131 - 1200306 + | O-succinylhomoserine sulfhydrylase Neut_1160 1200426 - 1201937 + | threonine dehydratase TERM 886 1202098 - 1202086 - f 73 -2.7 -5.055 | TTAATCGTTAAAAAA TTCTG GTT CAAAA CGCTGATAAAGAAGG TERM 887 1202886 - 1202908 + G 70 -8.4 -3.65425 | TTATTACCAGTAGTG TCAGCTCTGT GAT ACAGGGCGGA TTTCAGGTATCTGGC Neut_1161 1202273 - 1204333 + | methyl-accepting chemotaxis sensory transducer TERM 888 1207798 - 1207775 - g 83 -14 -2.96711 | opp_overlap 1207770 TGCAGAATTGATAGA TCGCCTGATT AATG AATCAGGCGA GTCGAGTATCATTCG TERM 889 1208528 - 1208544 + G 70 -4.3 -4.60041 | overlap 1208529 TGAGCAGGACGATGA GCAGTGG TAT CCGCTGA TTTTTACGCATGGCT Neut_1162 1204410 - 1209560 + | CheA signal transduction histidine kinases Neut_1163 1209631 - 1211397 + | YD repeat-containing protein ubiB 1213100 - 1211586 - | putative ubiquinone biosynthesis protein UbiB Neut_1165 1213822 - 1213190 - | hypothetical protein Neut_1166 1214342 - 1213911 - | hypothetical protein TERM 890 1214290 - 1214300 + g 73 -5.4 -4.73633 | opp_overlap 1214290, overlap 1214285 TGACTGTCAATAAAA GTAG TGG CTAC TTTTCTGTCTTGTTG TERM 891 1214300 - 1214290 - G 73 -5.4 -4.64676 | opp_overlap 1214290 1214285 TGACTGTCAATAAAA GTAG TGG CTAC TTTTCTGTCTTGTTG TERM 892 1215480 - 1215465 - g 73 -3.2 -5.00616 | overlap 1215450 CTGCCTGCCAAAAAA GCAGTA GCCC CACCGC AACATAAGCCATCCG TERM 893 1215883 - 1215853 - g 76 -3.2 -5.09895 | GATTGATTGAAAAAA TCACTGATCCGTTG ACC CATCTGATCCGTAA CAGCCTGGATCACGG Neut_1167 1214568 - 1216703 + | CheA signal transduction histidine kinases Neut_1168 1216775 - 1217296 + | CheW protein TERM 894 1218232 - 1218193 - g 75 -9.3 -3.87569 | gap 1, opp_overlap 1218202 1218216 1218219 CAAAAAATGCAACAA CAGCATGAAGCCGGT-GC AATTA GCTACCGGATTCCTGCCG GTAAATTTCCGGGTA Neut_1169 1217383 - 1219638 + | methyl-accepting chemotaxis sensory transducer TERM 895 1219963 - 1219973 + G 74 -8.2 -4.04319 | overlap 1219948 GCCATCCGGATATGC CGCC GGA GGCG TTTGTCGATTTCTGG TERM 896 1221244 - 1221232 - g 79 -7.7 -4.46112 | opp_overlap 1221235 CCGCATCGAAAGAAA TTGCC GAT GGCAA CACGGATCTTTCGCA Neut_1170 1219779 - 1222124 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Neut_1171 1222312 - 1223187 + | MCP methyltransferase, CheR-type Neut_1172 1223267 - 1223851 + | chemoreceptor glutamine deamidase CheD TERM 897 1224930 - 1224914 - g 84 -10.9 -4.09243 | CACATCCTGGCAAAA CTGACTG GTA CAGTCAG GCAAGCTGTTCGTAT Neut_1173 1223882 - 1224949 + | chemotaxis-specific methylesterase Neut_1174 1225116 - 1225526 + | hypothetical protein Neut_1175 1227241 - 1225718 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Neut_1176 1227503 - 1228507 + | fructose-1,6-bisphosphatase Neut_1177 1229504 - 1228545 - | glutathione S-transferase domain-containing protein Neut_1178 1229966 - 1229508 - | DoxX family protein TERM 898 1230375 - 1230401 + r 100 -15.2 -4.79223 | overlap 1230376 TCCGGCCGCCCTTCG AGCCTGTACGGA GTT TCCGTACAGGCC TTTTTCATGCTGTAC TERM 899 1230376 - 1230400 + r 100 -18.7 -3.46811 | overlap 1230375 CCGGCCGCCCTTCGA GCCTGTACGGA GTT TCCGTACAGGC CTTTTTCATGCTGTA Neut_1179 1231449 - 1230499 - | polysaccharide deacetylase Neut_1180 1232025 - 1231573 - | putative phosphohistidine phosphatase, SixA Neut_1181 1232803 - 1232114 - | hypothetical protein Neut_1182 1233510 - 1232806 - | carboxylesterase Neut_1183 1233589 - 1234695 + | twin-arginine translocation pathway signal Neut_1184 1236623 - 1234902 - | sulfite reductase subunit beta Neut_1185 1238467 - 1236632 - | sulfite reductase (NADPH) flavoprotein, alpha chain TERM 900 1237782 - 1237806 + g 71 -5.7 -4.37886 | gap 1, overlap 1237785 GTTGTCTCTAGTTGT GATGCGGCGG ATGATG TCGCCGC-TC TTTTCTCGGCGGTGA TERM 901 1237785 - 1237804 + g 70 -8.5 -3.79687 | overlap 1237782 GTCTCTAGTTGTGAT GCGGCGG ATGATG TCGCCGC TCTTTTCTCGGCGGT Neut_1186 1239941 - 1239012 - | transcriptional regulator CysB-like protein TERM 902 1240217 - 1240266 + G 74 -6.7 -4.30576 | gap 2, opp_overlap 1240230, overlap 1240230 1240232 GAGCAGTTACACAGT TTGTTAGGTAATATCCAGCGGGA TTATTC TCCCGCTGTAT-TTGCC-AACAG TTTTGGTGCTGAAGA TERM 903 1240230 - 1240255 + G 70 -9 -3.55203 | opp_overlap 1240230, overlap 1240217 1240232 GTTTGTTAGGTAATA TCCAGCGGGA TTATTC TCCCGCTGTA TTTGCCAACAGTTTT TERM 904 1240232 - 1240253 + G 77 -11.6 -3.34894 | opp_overlap 1240230, overlap 1240230 1240217 TTGTTAGGTAATATC CAGCGGGA TTATTC TCCCGCTG TATTTGCCAACAGTT Neut_1187 1240172 - 1240870 + | phosphoadenosine phosphosulfate reductase TERM 905 1241423 - 1241442 + G 76 -5.6 -4.81551 | opp_overlap 1241423 TAATGCGCGAACTCA CCCTGGAG AAAA CATCAGGG TTTTTCCTATCAGTA Neut_1188 1240875 - 1241804 + | sulfate adenylyltransferase subunit 2 Neut_1189 1241865 - 1243148 + | sulfate adenylyltransferase, large subunit TERM 906 1243237 - 1243227 - f 74 -4 -4.91109 | opp_overlap 1243227 TTTGTATTAGAAAAA TATC CTG GATA TTTGACTAAAAATAT TERM 907 1246492 - 1246530 + G 80 -10.2 -3.65812 | CTCCGATCGCATGAT GGCAGCAGTTGCTGCTGC ACG GCATCAGCAACTGGCACC TTATCTTAAAGCCGG Neut_1190 1243253 - 1246804 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 908 1246903 - 1246917 + F 75 -4.3 -4.90266 | overlap 1246902 TGGATTTTGCTGTGG TTGTC AGTAC GACAA TTTTTGATTAATGAA Neut_1191 1246960 - 1248087 + | NAD(P)(+) transhydrogenase (AB-specific) TERM 909 1248175 - 1248196 + G 76 -2.9 -5.10461 | opp_overlap 1248175 CCAACGATCATTAAC CTGACAGTA TTTG TCCTGGCAG TTTTTGTTGGCTACC Neut_1192 1248142 - 1248450 + | putative transmembrane NAD(P) transhydrogenase (alpha subunit part 2) TERM 910 1249329 - 1249313 - g 76 -6.5 -4.52857 | overlap 1249314 ATGGGGCACAGAAAA CCTACCG TAG CGGTAGT GCAGATGATGCTGCA TERM 911 1249328 - 1249314 - g 70 -10 -3.31232 | overlap 1249313 TGGGGCACAGAAAAC CTACCG TAG CGGTAG TGCAGATGATGCTGC TERM 912 1249329 - 1249344 + G 80 -4.7 -5.06816 | CTACCGTAGCGGTAG TGCAG ATGATG CTGCA TTTTTGTTGGGGAAT Neut_1193 1248451 - 1249830 + | NAD(P) transhydrogenase, beta subunit Neut_1194 1250664 - 1249852 - | Sel1 domain-containing protein TERM 913 1249894 - 1249910 + g 86 -5.1 -5.32882 | TTTATTTCTGGAATC CAGCC ACTCTCG GGCTG TTTTTTGTGCTGATG TERM 914 1250950 - 1250965 + r 71 -9 -3.28924 | opp_overlap 1250949 1250950, overlap 1250951 GACAAGCTATTAAAT CTGGCT CTGC AGCCAG TTCTGAAGGCCAATA Neut_1195 1251408 - 1250944 - | bacterioferritin Neut_1196 1251662 - 1251462 - | BFD/(2Fe-2S)-binding domain-containing protein Neut_1197 1252323 - 1252472 + | transposase and inactivated derivatives TERM 915 1252894 - 1252883 - f 72 -7.2 -4.0162 | overlap 1252884 CTGTTACAGCATAAA GGGG GGAT CCCC TGAAAAATGAGGAAG TERM 916 1253149 - 1253161 + F 72 -3.3 -4.93454 | opp_overlap 1253149, overlap 1253129 1253137 TGCTCAGTGAGCATA GCTTC AAT GATGC TTTTATATTTATTTC TERM 917 1253370 - 1253360 - g 73 -3.2 -4.91712 | TTTAATGTACAAAAA CAGC ATG ACTG GCCCGTTGCTCCCAT Neut_1198 1253186 - 1254217 + | hypothetical protein TERM 918 1254474 - 1254464 - g 70 -2.6 -5.03314 | TGCATGCTGAAAAAA TATT TTC AATA CAATTTGCACAGTTG TERM 919 1255628 - 1255616 - g 80 -2 -5.46629 | AAGATCTGAAAAAAA TTGA AAATA TCAA CAAATTTGCGCGTGC Neut_1199 1254271 - 1255794 + | diguanylate phosphodiesterase Neut_1200 1256698 - 1255811 - | phosphoribosylaminoimidazole-succinocarboxamide synthase Neut_1201 1257866 - 1256736 - | phosphoribosylaminoimidazole carboxylase ATPase subunit Neut_1202 1258327 - 1257857 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 920 1258470 - 1258503 + H 70 -5.9 -4.31379 | opp_overlap 1258459 1258481, overlap 1258459 1258471 AAGAGCAAATCCCGT TTGCTGTATAAGCCC AGCA GGGCAGATTCAGCAG TTTTACTGGCTTAAT Neut_1203 1258531 - 1258965 + | biopolymer transport protein ExbD/TolR Neut_1204 1259036 - 1259674 + | superoxide dismutase TERM 921 1260099 - 1260060 - g 70 -2.8 -4.77986 | gap 1, overlap 1260061 CCAAATATGTAAAAA CCG-CGCGCAGCCATTTTG CTG CAAAAGGGATGCATGTCGA TCTGATCAAATTATA hisG 1259684 - 1260334 + | ATP phosphoribosyltransferase catalytic subunit hisD 1260356 - 1261654 + | histidinol dehydrogenase Neut_1207 1261718 - 1262893 + | ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein TERM 922 1263925 - 1263939 + G 70 -4.2 -4.59773 | overlap 1263927 GGTATACCCGTGGGT TGGCAG GTT CTGCTG TTTTTCGCCATGCCA Neut_1208 1263057 - 1264070 + | putative TIM-barrel protein, nifR3 family protein Neut_1209 1264067 - 1264309 + | helix-turn-helix, Fis-type TERM 923 1265710 - 1265722 + G 90 -6.3 -5.22039 | GCATGGATCTGTCGT TGCAT CGG ATGCA TTTTTTCCGTTTCGG Neut_1210 1264319 - 1265881 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Neut_1211 1265945 - 1267243 + | phosphoribosylamine--glycine ligase TERM 924 1267813 - 1267828 + G 74 -2.5 -5.08601 | TTTGTAGCCATTGAC CGGAC ATCAAA GTTCG TTTTTGTTCAACTCC Neut_1212 1267390 - 1268364 + | integrase catalytic subunit TERM 925 1269074 - 1269096 + G 74 -7 -4.3208 | opp_overlap 1269077 1269078, overlap 1269077 1269078 CTGCAGCTATTTCCA GAATCAACCG CCA CGGTTGGTTG TTTTGACTTCTGAAG TERM 926 1269077 - 1269093 + G 79 -8.7 -4.27465 | opp_overlap 1269077 1269078, overlap 1269074 1269078 CAGCTATTTCCAGAA TCAACCG CCA CGGTTGG TTGTTTTGACTTCTG Neut_1213 1268361 - 1269527 + | esterase/lipase/thioesterase family lipase Neut_1214 1270199 - 1269612 - | hypothetical protein Neut_1215 1272204 - 1270258 - | helicase c2 TERM 927 1274445 - 1274463 + G 77 -10.2 -3.53012 | CTGCTGCTGGTCACT GCGCCTGG TAG CCAGCCGC TTTACGACGGCAACA Neut_1216 1272424 - 1274601 + | organic solvent tolerance protein Neut_1217 1274667 - 1275941 + | PpiC-type peptidyl-prolyl cis-trans isomerase Neut_1218 1276011 - 1277048 + | 4-hydroxythreonine-4-phosphate dehydrogenase ksgA 1277050 - 1277820 + | dimethyladenosine transferase Neut_1220 1278316 - 1277813 - | methylated-DNA--protein-cysteine methyltransferase Neut_1221 1279809 - 1278376 - | transcriptional regulator, AraC family protein TERM 928 1279639 - 1279625 - G 71 -7.8 -4.03167 | CGACAACGCAAACAA GGACGG TAA CCATCC TGCTCCGCACGTGCT TERM 929 1279851 - 1279877 + H 71 -4.5 -4.6526 | CATGAAGAAAGTTGC GGGAGTAAGAA ACGCA TTATTATTCCC TTTTTCCAGATTTAT TERM 930 1280002 - 1279989 - g 85 -3.7 -5.37593 | opp_overlap 1279989 1279990, overlap 1279990 TGTCAAATCAAAAAA CCCGC TACG GCGGT CTGTTCTGTGTGCTT Neut_1222 1279973 - 1280215 + | hypothetical protein TERM 931 1280290 - 1280305 + F 85 -9 -4.3534 | opp_overlap 1280290 1280287 TAACACGTAAAGTTA GTCCCA TTTT TGGGAC TTTTGGTCATTCCAA TERM 932 1280577 - 1280589 + F 73 -6.2 -4.39386 | CTGACATTCGGCCGC CCCG TGAAT CGGG TTTTCATCGTTTCCG Neut_1223 1280631 - 1281101 + | transcriptional regulator, XRE family protein Neut_1224 1281132 - 1281455 + | transposase IS3/IS911 family protein Neut_1226 1283193 - 1283086 - | protein disulfide-isomerase Neut_1227 1284897 - 1283338 - | amino acid permease-associated region TERM 933 1284247 - 1284225 - G 93 -4.1 -5.83822 | gap 1, overlap 1284226 1284229 CATACGCAAAAAAAA TGGATGCCGC TGCA GCGGCAAC-A CCTGATGTTCCTAAT TERM 934 1284244 - 1284229 - G 71 -10.4 -3.05327 | overlap 1284225 1284226 CGCAAAAAAAATGGA TGCCGC TGCA GCGGCA ACACCTGATGTTCCT TERM 935 1284692 - 1284678 - G 71 -7.8 -3.97088 | GCTCAGAATAGCAAA GCGCAG CCA CTGCAC AGACAAAACCGGCAA TERM 936 1284731 - 1284701 - G 79 -7 -4.61199 | gap 1, opp_overlap 1284725 ACTGCACAGACAAAA CCGGCAATGACGA AAGCGA TCATCATT-CCGG GGCCGGCTTTCTGGG rdgC 1286305 - 1285421 - | recombination associated protein Neut_1229 1287321 - 1286548 - | TPR repeat-containing protein TERM 937 1286607 - 1286617 + g 100 -4 -5.86965 | CTGTAAGGTAAGCAC TTTC CGG GAAA TTTTTTTTGATGACT Neut_1230 1287353 - 1288381 + | pseudouridine synthase, RluA family protein TERM 938 1289454 - 1289443 - g 76 -5.8 -4.64598 | GAAGGACGGTAAAAA CCTG TTTG CAGG GAACGGTTATGCCGG Neut_1231 1288604 - 1290010 + | glutamine synthetase, type I Neut_1232 1290164 - 1290634 + | hypothetical protein Neut_1233 1291160 - 1290690 - | transposase, IS4 family protein Neut_1235 1292064 - 1292843 + | hypothetical protein Neut_1236 1293479 - 1292919 - | NifU domain-containing protein Neut_1237 1293971 - 1293489 - | SUF system FeS assembly protein, NifU family protein Neut_1238 1295239 - 1293968 - | SufS subfamily cysteine desulfurase Neut_1239 1296550 - 1295243 - | FeS assembly protein SufD TERM 939 1295845 - 1295835 - G 71 -5.4 -4.44797 | opp_overlap 1295838 1295839 TTAGCAATATGAAAA GCTT GCG AAGC TTCGCGTTGTACTCG Neut_1240 1297338 - 1296547 - | FeS assembly ATPase SufC Neut_1241 1298771 - 1297335 - | cysteine desulfurase activator complex subunit SufB Neut_1242 1299120 - 1298791 - | iron-sulfur cluster assembly accessory protein Neut_1243 1299613 - 1299146 - | transcriptional regulator, BadM/Rrf2 family protein TERM 940 1299309 - 1299323 + g 71 -5.7 -4.4078 | TGGGTCATGCATTTA CTGTC GCCCA GACAG TTTTCCTTACCACCA TERM 941 1299856 - 1299868 + H 72 -10.5 -2.94045 | GCTCGGACGACTGCT GCGCC TTG GGCGC TAATTATTCCAATCA TERM 942 1299924 - 1299909 - H 78 -10.4 -3.66178 | TGTTTGAAGTGTAAA GGCTGG CATA CCAGCC AACCGTCCGGTTTGA TERM 943 1301095 - 1301068 - g 78 -2.1 -5.24129 | gap 1, overlap 1301070 1301071 1301073 CTTGCGGACAAAAAA CACG-AGATCTT TGATG AAGATCTGCACG CGCTTGTTTCGGATG TERM 944 1301480 - 1301458 - g 76 -8.4 -4.15788 | overlap 1301459 AATGCCTGTAATAAA CTGCACTCCA GCC TGGAGCGCAC ACACCCACAGGTTTA TERM 945 1301479 - 1301459 - g 77 -11.9 -3.08991 | overlap 1301458 ATGCCTGTAATAAAC TGCACTCCA GCC TGGAGCGCA CACACCCACAGGTTT Neut_1244 1299964 - 1301496 + | 2-isopropylmalate synthase TERM 946 1301566 - 1301596 + F 79 -11.3 -3.01924 | opp_overlap 1301561 1301578 AGGGGGAAATTCCAA TTCCGGTACAG ATACAATTG CTGTACCGGAA TCTTACAAAAAGCTC TERM 947 1301619 - 1301608 - f 76 -5.8 -4.87786 | opp_overlap 1301608 GGAATCTTACAAAAA GCTC AATA GAGC TTGTGAAACGCATTG Neut_1245 1301660 - 1302124 + | redoxin domain-containing protein Neut_1246 1302738 - 1302145 - | lytic transglycosylase, catalytic Neut_1247 1304432 - 1302726 - | prolyl-tRNA synthetase TERM 948 1304833 - 1304847 + G 70 -10 -3.27215 | opp_overlap 1304833 AACTGGCTGAAGAAA CAGGCT TGC AGCCTG TTCATGTGGAAATTT TERM 949 1304847 - 1304833 - g 83 -10 -4.15788 | opp_overlap 1304833 AACTGGCTGAAGAAA CAGGCT TGC AGCCTG TTCATGTGGAAATTT Neut_1248 1304661 - 1305224 + | dinucleoside polyphosphate hydrolase TERM 950 1306049 - 1306037 - g 76 -5.5 -4.82667 | overlap 1306038 CTACGAGACCAAAAA CCCTG CTA CAGGA CGGATGGGGGTAACA Neut_1249 1305330 - 1306334 + | cytochrome-c peroxidase Neut_1250 1306549 - 1307847 + | periplasmic sensor signal transduction histidine kinase Neut_1251 1307874 - 1308407 + | response regulator receiver protein TERM 951 1308454 - 1308428 - T 80 -11.7 -2.87132 | opp_overlap 1308428 1308415 1308430, overlap 1308430 1308432 1308434 GCTCCGCTTGACAGA TATACACCCGC GCGTT GCGAGTGTATA TCTGTCAGCAACTGA TERM 952 1308428 - 1308454 + T 72 -10.2 -2.87564 | opp_overlap 1308428 1308430 1308432 1308434, overlap 1308415 1308430 GCTCCGCTTGACAGA TATACACCCGCG CGT TGCGAGTGTATA TCTGTCAGCAACTGA TERM 953 1308452 - 1308430 - T 71 -9.9 -2.98823 | opp_overlap 1308428 1308415 1308430, overlap 1308428 1308432 1308434 TCCGCTTGACAGATA TACACCCGC GCGTT GCGAGTGTA TATCTGTCAGCAACT Neut_1252 1310669 - 1308510 - | TonB-dependent siderophore receptor TERM 954 1308610 - 1308636 + g 70 -3.1 -4.88388 | gap 1, opp_overlap 1308610, overlap 1308612 TCGATATTAGCCAAA TTTTCGACATTC GCCT GAATG-CGAATA TTTTTATGCGGTTGT TERM 955 1308781 - 1308797 + g 71 -6.5 -4.1585 | opp_overlap 1308774 AAATCATACCGGTTC CACACGG CTA CCGTATG TTTTGGAACTTGTGC Neut_1254 1312488 - 1312075 - | hypothetical protein Neut_1255 1313023 - 1313415 + | putative insertion sequence transposase protein TERM 956 1313491 - 1313535 + G 74 -11.4 -3.05816 | opp_overlap 1313490 1313488 1313493, overlap 1313496 AACGACCACCAACAT GACGCGACAGCG-AGGTCGCGC GCC GCGCGGCCAGCGCTGT-GTGGC TTCGGTGCCCCATGG TERM 957 1313496 - 1313531 + G 73 -11.8 -2.54896 | gap 1, opp_overlap 1313493 1313490 1313488, overlap 1313491 CCACCAACATGACGC GACAGCG-AGGTCGCGC GCC GCGCGGCCAGCGCTGTG TGGCTTCGGTGCCCC Neut_1256 1313489 - 1313962 + | ISRm2011-2 transposase protein Neut_1257 1313993 - 1314328 + | ISRm2011-2 transposase protein Neut_1258 1315200 - 1314421 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 958 1315115 - 1315102 - G 74 -6.7 -4.32233 | ATAAAAACCGGAAAA CAACG CTGC CGTTG TGAAGAGGTTAGGTA Neut_1259 1315880 - 1315230 - | phosphatidylserine decarboxylase TERM 959 1315897 - 1315908 + r 80 -5.8 -5.06961 | TATTCAGTTCTTCGC CTGG TCAA CCAG TTTGTTTTTCTTGAT Neut_1260 1316901 - 1315885 - | ketol-acid reductoisomerase TERM 960 1316590 - 1316602 + g 76 -3.3 -5.10461 | opp_overlap 1316591, overlap 1316591 GAAACCATGTGCAAA AGCCA GTG TGGCA TTTTTCTTCAGTGCC TERM 961 1316601 - 1316591 - G 71 -6.8 -4.13304 | opp_overlap 1316591 1316590 AAACCATGTGCAAAA GCCA GTG TGGC ATTTTTCTTCAGTGC Neut_1261 1317481 - 1316990 - | acetolactate synthase 3 regulatory subunit TERM 962 1317114 - 1317126 + g 73 -2.7 -4.99645 | CTGGTACCCGTAAGT TCTAT GGT GTAGA TTTTATTTGTAACAT Neut_1262 1319189 - 1317486 - | acetolactate synthase, large subunit, biosynthetic type Neut_1263 1320966 - 1319515 - | peptidase U62, modulator of DNA gyrase TERM 963 1319697 - 1319711 + g 71 -5.7 -4.28049 | overlap 1319693 1319707 TCAGAGTAGCTCCTT TCACC GGATA GGTGA TTTTACCATTTTCAA Neut_1264 1321953 - 1321090 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Neut_1265 1326045 - 1322155 - | hypothetical protein TERM 964 1324499 - 1324472 - G 82 -10.6 -3.86346 | opp_overlap 1324474 TCAGCCTGTGACAAA TACCCGGCCAAA TCTA TCTGTCCGGGTA AATTACCATTAAAAG TERM 965 1324693 - 1324718 + g 70 -8.4 -3.66784 | opp_overlap 1324695 CATATTACTTGAGGA CAGAAACAGG GAGCCA TCTGTTTCTG TTATGTTGACGATCC TERM 966 1326195 - 1326185 - H 78 -5.4 -4.94262 | TACAGTAAAAACAAA GCAT TTT ATGC GAAGCTATCGCCAAA TERM 967 1326577 - 1326561 - g 75 -10.9 -3.35813 | GCTGATCTGAACGAA GTCATGG CAA CCATGAC AGCTCTAGCCGATGT TERM 968 1328983 - 1329001 + G 72 -9.6 -3.34344 | opp_overlap 1328983 1328982 ATGTATCCCAGAAAT TTGCTCGT GTA ACGAGCGA TTACTTAAGCAGTGC Neut_1266 1326273 - 1329062 + | (glutamate--ammonia-ligase) adenylyltransferase Neut_1267 1329528 - 1329842 + | hypothetical protein TERM 969 1329874 - 1329858 - T 100 -13.7 -5.71712 | TCTTACATAAAAAAA CCCCCGT ATA ACGGGGG GTTGCAGGCAGCAGT Neut_1268 1330561 - 1329899 - | hypothetical protein TERM 970 1330121 - 1330135 + g 74 -4.2 -4.77165 | overlap 1330115 GTCACTGATCAGCAC GACACG TTC CGTATC TTTTGTTCTGACGAG TERM 971 1330792 - 1330779 - g 100 -6.7 -5.36364 | opp_overlap 1330779 1330778 GGAAAAAGATAAAAA GACCT GGTC AGGTC GTTTCAGTGAACCTG Neut_1269 1330762 - 1332147 + | argininosuccinate lyase TERM 972 1332688 - 1332678 - g 71 -6.8 -4.18018 | opp_overlap 1332677, overlap 1332679 TCTCGCCAGGGAAAA CGGT TAC ACCG GTTCGCTGCAATCGC Neut_1270 1332166 - 1333071 + | fructosamine kinase TERM 973 1333407 - 1333417 + G 79 -6.8 -4.72272 | TGGCCAATGATTGCG GTGC TGG GCAC TTTTTCATCAGGCAA TERM 974 1333778 - 1333788 + G 80 -2.4 -5.40072 | CATTGATCTGTCCGA CCTG GTA CTGG TTTTTTTCGACGCGC TERM 975 1333949 - 1333993 + G 71 -7.9 -4.07562 | gap 3 CGAGGAAGTTATTTC CGCCTGG-CAGCGTTCACTGGC ACAG GCC-G-GATTGCTGGCCGGGCG TTTCTATCGGATTTA Neut_1271 1333215 - 1334705 + | hypothetical protein TERM 976 1334721 - 1334753 + T 79 -4.2 -5.27938 | gap 1, opp_overlap 1334722, overlap 1334722 ATAGAATCAACTAAT AGCTACCTGTTTGTA GTAA TACAG-CAGGTGGCA TTTTTATTTCAGGAT TERM 977 1334722 - 1334752 + T 71 -7.7 -3.75678 | gap 1, opp_overlap 1334722, overlap 1334721 TAGAATCAACTAATA GCTACCTGTTTGTA GTAA TACAG-CAGGTGGC ATTTTTATTTCAGGA Neut_1272 1335676 - 1335245 - | hypothetical protein Neut_1273 1336005 - 1335679 - | hypothetical protein Neut_1274 1336419 - 1336021 - | CrcB protein TERM 978 1336658 - 1336672 + r 75 -8.6 -3.72324 | opp_overlap 1336660 ACCCAGCTTGGTCAA CAGGTT GTC AACCTG TTCTTGATCGACGTA Neut_1275 1337278 - 1336637 - | chemotaxis phosphatase, CheZ TERM 979 1336744 - 1336755 + g 76 -3 -5.0917 | TCAAGCTGTTCTTTT TTTC AATC GAAA TTTCTTTTTTCGTCG Neut_1276 1337722 - 1337327 - | response regulator receiver protein TERM 980 1337574 - 1337587 + g 70 -2.4 -5.00884 | ACAATGAAATCGAAG CTAC CATCAC GTAG TTTTTTCAGAGCCAT Neut_1278 1339986 - 1339024 - | integrase catalytic subunit TERM 981 1339521 - 1339506 - G 74 -2.5 -5.08601 | GGAGTTGAACAAAAA CGAAC TTTGAT GTCCG GTCAATGGCTACAAA TERM 982 1340363 - 1340389 + H 73 -6.5 -4.41716 | opp_overlap 1340368, overlap 1340368 AAACGATGCCCAATG AAAAACCGCCC GGGAG GGGCGGTTATA TTTGTTCTATCATAT TERM 983 1340368 - 1340384 + H 86 -10.8 -4.01025 | opp_overlap 1340368, overlap 1340363 ATGCCCAATGAAAAA CCGCCC GGGAG GGGCGG TTATATTTGTTCTAT TERM 984 1340384 - 1340368 - H 95 -10.8 -4.86621 | opp_overlap 1340368 1340363 ATGCCCAATGAAAAA CCGCCC GGGAG GGGCGG TTATATTTGTTCTAT TERM 985 1340641 - 1340627 - H 80 -4.4 -5.18726 | CTCCTATAAGAAAAA TATATT GAC AATATA ACTCTTCTAGCTGGT TERM 986 1340712 - 1340722 + H 79 -2.6 -5.35354 | opp_overlap 1340699 AACAAATATTTTATT TATT GTC AATA TTTTTTAATTGTCTC TERM 987 1340773 - 1340749 - H 71 -4.5 -4.67982 | opp_overlap 1340749, overlap 1340762 TCTCACTTAATAAAA TTATAAAATAA TCT TTATGTTATAA ATAAATGATTTTTAA Neut_1279 1340899 - 1341090 + | ATP-dependent dsDNA exonuclease (SbcC) Neut_1280 1341166 - 1341411 + | hypothetical protein Neut_1281 1343306 - 1341381 - | iron permease FTR1 TERM 988 1342822 - 1342802 - G 77 -9.7 -3.78904 | overlap 1342815 CAGTAAAGGCAATAA CAGGCGGAT CCA ATCCGACTG CAGCCGGGCCATCTC Neut_1282 1344136 - 1343657 - | hypothetical protein Neut_1283 1344157 - 1345227 + | glycine cleavage T protein (aminomethyl transferase) Neut_1284 1345906 - 1345250 - | ankyrin Neut_1285 1346672 - 1345908 - | hydrolase, TatD family protein Neut_1286 1347223 - 1346741 - | putative 6-pyruvoyl tetrahydropterin synthase Neut_1287 1347240 - 1348100 + | radical SAM domain-containing protein Neut_1288 1348417 - 1348130 - | putative transcriptional regulator, XRE family protein TERM 989 1348208 - 1348218 + g 80 -3.2 -5.22006 | CATTGCTGCGATAAG GAGG TCA TCTC TTTTTATTCTGGTCA TERM 990 1348405 - 1348421 + g 70 -2.3 -5.0065 | GGTTGGGTATGCTCT TAAAAAG TTT CATTTTA TTTTCTTTCTGGATA Neut_1289 1349786 - 1348830 - | cation diffusion facilitator family transporter Neut_1290 1352300 - 1349811 - | heavy metal translocating P-type ATPase TERM 991 1351852 - 1351868 + g 74 -10.1 -3.57144 | overlap 1351844 TCATCGCTGGCCTGT GCCGTGG TAT CCATGGC TTTGGCGGTAAAACC Neut_1291 1354611 - 1352413 - | glycogen branching enzyme TERM 992 1355241 - 1355219 - g 79 -7.1 -4.62302 | gap 1 GAACACGTCGAAAAA CAGGCCGATT TGAC AATCG-CCTG CCTGGAAGTTCCGAT Neut_1292 1354757 - 1356034 + | glucose-1-phosphate adenylyltransferase TERM 993 1357156 - 1357170 + G 70 -8.6 -3.76373 | CGGGATGATCAGCTA TCCGAT CTG ATCGGA TTTGAATATTCAAGA TERM 994 1357433 - 1357465 + G 70 -10.6 -2.90982 | gap 1, opp_overlap 1357431 1357430 1357433, overlap 1357425 1357424 1357434 ACAACATTGAAATTA CCCGATTGCCG-TCG CTGA CGGCCGGCAGTTGGG TATATGGCAGTTTCT Neut_1293 1356100 - 1357818 + | glycoside hydrolase family protein TERM 995 1358037 - 1358053 + G 78 -5.8 -4.78848 | TTTGCCATCCACTTT TCCGGC TGGTT GCTGGA TTTTCTATTTGAGCA Neut_1294 1357884 - 1359908 + | 4-alpha-glucanotransferase TERM 996 1360733 - 1360707 - g 71 -7.2 -4.07568 | opp_overlap 1360715, overlap 1360712 GCTCTTTTGCGAAAA CGAAACCAACGC CTG GCGGCTGTTTCG CAACAACAATAAAGG TERM 997 1362053 - 1362041 - g 74 -4.1 -4.92363 | overlap 1362052 AAATATTGACAAAAA TGCTC GAT GAACA GGAATTCCTGAGCCC Neut_1295 1359940 - 1362630 + | hypothetical protein Neut_1296 1363592 - 1362855 - | phage SPO1 DNA polymerase-related protein Neut_1297 1364139 - 1363651 - | ribosomal-protein-alanine acetyltransferase Neut_1298 1364813 - 1364142 - | peptidase M22, glycoprotease Neut_1299 1365361 - 1364828 - | 2'-5' RNA ligase Neut_1300 1365864 - 1365361 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Neut_1302 1367183 - 1366626 - | elongation factor P Neut_1303 1368418 - 1367258 - | hypothetical protein Neut_1304 1368545 - 1369552 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Neut_1305 1370052 - 1369597 - | putative transcriptional regulator MerR TERM 998 1369875 - 1369861 - G 79 -11.4 -3.59979 | opp_overlap 1369859 TTCGTCCAGGCTAAA GCCCAG CCG CTGGGC CGATTTCACGAACCG TERM 999 1370191 - 1370211 + G 79 -8.1 -4.28361 | CCATTCTTGCGTCGG CCTGCTGCC TGG GGCCGCTGG TTTTGATCGCCTTGG TERM 1000 1370293 - 1370309 + G 90 -9.4 -4.62069 | CGATCTTCATCGGCG CAGCGC TGGTC GCGCTG TTTTTCGCCTGGCGG Neut_1306 1370124 - 1370474 + | putative mercuric transport protein Neut_1307 1370490 - 1370765 + | mercuric transport protein periplasmic component Neut_1308 1370793 - 1371200 + | putative mercury transport protein MerC TERM 1001 1371218 - 1371194 - f 81 -10.8 -3.42663 | gap 1, overlap 1371192 ACTACCACCCAAACA CGGCTAACTGC ATTG GCAGTT-GCCG AAACGAAAAGGAACG TERM 1002 1372317 - 1372293 - g 73 -12.1 -2.61695 | overlap 1372292 1372290 GGTACGGTGAAATAC GCGCCGACCAG CTG CTGGTCGCCAC TGGCAGGGCACCGAA Neut_1309 1371239 - 1372921 + | putative mercuric reductase Neut_1310 1372939 - 1373304 + | transcriptional regulator MerD Neut_1311 1373301 - 1373537 + | putative mercury resistance protein Neut_1312 1373603 - 1373815 + | hypothetical protein TERM 1003 1374390 - 1374377 - g 76 -6.7 -4.49556 | CGGGGACGAAAGAAA TCGCT GAAC AGCGA ACAAATTGCCGAGTT Neut_1313 1373945 - 1374502 + | resolvase domain-containing protein Neut_1314 1374505 - 1377477 + | transposase Tn3 family protein Neut_1315 1378872 - 1377613 - | hypothetical protein TERM 1004 1378063 - 1378051 - G 78 -2.6 -5.25803 | AATCCCTAGAAAAAA GAGG AACAG CCCC ATAAATATGGCAGGA TERM 1005 1378630 - 1378617 - G 70 -4.5 -4.63527 | overlap 1378621 CCATGATGGCAAAAA CGAAC ATCG GCTCG GTGAAATTACGTGAA Neut_1316 1379976 - 1378930 - | peptide chain release factor 2 Neut_1317 1381999 - 1380152 - | patatin Neut_1318 1382017 - 1383264 + | transposase, mutator type Neut_1319 1383417 - 1383893 + | hypothetical protein Neut_1320 1384867 - 1384412 - | hypothetical protein Neut_1321 1385821 - 1384994 - | integrase catalytic subunit TERM 1006 1385828 - 1385840 + r 93 -4.8 -5.48213 | opp_overlap 1385812 1385824, overlap 1385826 CCGGCACATCAGGCC GACC GGGTA GGTC TTTTTCTTTTGGGTG Neut_1322 1386165 - 1385869 - | transposase IS3/IS911 family protein Neut_1323 1386298 - 1386549 + | hypothetical protein Neut_1324 1386598 - 1386744 + | integrase, catalytic region Neut_1325 1387562 - 1388791 + | cytochrome c peroxidase Neut_1326 1389240 - 1388893 - | hypothetical protein TERM 1007 1389467 - 1389419 - R 71 -10 -2.82623 | opp_overlap 1389409, overlap 1389416 1389434 TCTTTGGTATAACTA CCTCATTATAAAAAAGGATC TTTCAATCC GACCCTTTTTTATAATGAAA CAACTGACTAATTAA TERM 1008 1389447 - 1389434 - R 77 -3.1 -5.31275 | overlap 1389419 1389416 CCTCATTATAAAAAA GGATC TTTC AATCC GACCCTTTTTTATAA Neut_1327 1389824 - 1389486 - | hypothetical protein TERM 1009 1390396 - 1390369 - H 70 -6.2 -4.17355 | CAAAGAACAATCAAA TGAGCCTTGCCC GCTC GGGCAGAACCCA CACATGACGAGCCTG TERM 1010 1390682 - 1390695 + H 71 -3.9 -4.76892 | CGTTGGGAGCTGGCC CAAAT GCTC ATTTG TTTTTACCTTGCTCT Neut_1328 1390965 - 1392056 + | spermidine/putrescine ABC transporter ATPase subunit TERM 1011 1392671 - 1392635 - g 76 -6.4 -4.62872 | overlap 1392637 1392638 1392640 ACCAATCTGGAAAAA CATGATCCGGTGCTGC TCGAT GCTGCACAGGATCTAG GCGCAAACCGCTGGC TERM 1012 1392668 - 1392638 - g 73 -11.1 -2.94823 | overlap 1392637 1392635 1392640 AATCTGGAAAAACAT GATCCGGTGCTGC TCGAT GCTGCACAGGATC TAGGCGCAAACCGCT TERM 1013 1392681 - 1392726 + G 71 -10.3 -3.17622 | opp_overlap 1392680 1392679, overlap 1392679 1392679 1392677 1392682 ATCTAGGCGCAAACC GCTGGCAGCGCTTCTGGCTGG TCAC CTGGCCACAGTCGCTGCCGGG TGTCTTCTCCGGCTC TERM 1014 1392682 - 1392725 + G 77 -13.8 -2.50252 | opp_overlap 1392680 1392679, overlap 1392679 1392681 1392679 1392677 TCTAGGCGCAAACCG CTGGCAGCGCTTCTGGCTGG TCAC CTGGCCACAGTCGCTGCCGG GTGTCTTCTCCGGCT Neut_1329 1392053 - 1392955 + | binding-protein-dependent transport systems inner membrane component Neut_1330 1392975 - 1393760 + | binding-protein-dependent transport systems inner membrane component TERM 1015 1394539 - 1394529 - g 89 -2.4 -5.81412 | opp_overlap 1394529 TGGATGCAAAAAAAA CCGG ACG CCGC TTTAGCGTGGATTTT Neut_1331 1393757 - 1394866 + | extracellular solute-binding protein Neut_1332 1394871 - 1395179 + | putative ferredoxin 2fe-2s protein TERM 1016 1395911 - 1395932 + G 70 -2.3 -5.02476 | overlap 1395913 TTAAAAGCGATGCGA TTCTGTTTT CAAA AAAGCGGGA TTTTTTCGCCCATAT Neut_1333 1395499 - 1396302 + | hypothetical protein TERM 1017 1396476 - 1396497 + G 77 -12.3 -3.16033 | opp_overlap 1396475 1396476 1396478, overlap 1396474 1396473 1396495 ATCCATTCTGTAAAG CAGGCGAGC TACT GCTTGCCTG TGCTTTTCATAGTTG Neut_1334 1396304 - 1397752 + | Eco57I restriction endonuclease TERM 1018 1397884 - 1397906 + G 71 -11.4 -2.72344 | opp_overlap 1397884 1397898 1397901, overlap 1397871 ATCCAATCCTGAAAA TCCCGATTAT CAA ATGATCGGGA TGCTTCCCGATGGGG TERM 1019 1397906 - 1397884 - g 79 -9.2 -4.1466 | opp_overlap 1397884 1397871, overlap 1397898 1397901 ATCCAATCCTGAAAA TCCCGATTAT CAA ATGATCGGGA TGCTTCCCGATGGGG TERM 1020 1398528 - 1398510 - g 74 -6.7 -4.37092 | opp_overlap 1398505 1398502 1398510 ATCGGCTTCATAAAA TCCCAGA AATTG CCTGGGA TTTGGTTATTTTTGA Neut_1335 1397756 - 1400218 + | superfamily II DNA/RNA helicase TERM 1021 1400208 - 1400197 - T 73 -4.4 -4.7416 | TGAAAACCTGAAAAA GATG GCTT CATC AAGTTTTTGAAAACT Neut_1336 1404041 - 1400280 - | ATP-dependent helicase HrpA TERM 1022 1402184 - 1402208 + g 88 -3.5 -5.60993 | overlap 1402165 TGGTTTCTGCCAGCT CGGCCGCAA CTACCCA TTTCGGCTG TTTTTTTCTCAGGGA Neut_1337 1404527 - 1404048 - | hypothetical protein Neut_1338 1405667 - 1404558 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1023 1404748 - 1404760 + g 70 -9.1 -3.55444 | overlap 1404745 ACATTCTGCCGACCT GCCAC CAG GTGGC TTTCAAGCATGACAC Neut_1339 1407467 - 1405812 - | DNA mismatch repair protein MutS domain-containing protein TERM 1024 1407578 - 1407596 + H 84 -7.6 -5.00616 | opp_overlap 1407582 CTCATCGCCTTACTA TTAATTAC TAA GTAATTAA TTTTTTCGGGCAAGA Neut_1340 1407615 - 1408193 + | hypothetical protein Neut_1341 1408206 - 1409360 + | RND family efflux transporter MFP subunit TERM 1025 1409367 - 1409384 + G 78 -6.3 -4.8048 | gap 1 CAGCCATGATACAGC TCCAGGGT ATC ACCC-GGA TTTTTCATATGGGGG Neut_1342 1409357 - 1410028 + | ABC transporter-related protein TERM 1026 1410720 - 1410704 - g 70 -8.7 -3.64703 | GGTTGCTGATTGAAA TCCGCCA TCA TGGCGAA ATCGATAATGCCAGG TERM 1027 1410864 - 1410892 + G 83 -8.7 -4.3129 | overlap 1410865 GGGGGTTGCCGGTAT CGCCGTCATCAGC CTT GCTGTTGCCGGCA TTTTGGTGATGAATG TERM 1028 1410865 - 1410891 + G 77 -12.2 -3.18292 | overlap 1410864 GGGGTTGCCGGTATC GCCGTCATCAGC CTT GCTGTTGCCGGC ATTTTGGTGATGAAT Neut_1343 1410025 - 1411227 + | hypothetical protein Neut_1344 1411233 - 1412432 + | hypothetical protein Neut_1345 1412990 - 1412442 - | hypothetical protein TERM 1029 1414078 - 1414089 + G 78 -5.8 -4.85782 | GTTAATCAATCTCAC CAGG CTGC CCTG TTTATTTTTCAAAAA Neut_1346 1413562 - 1414407 + | transcriptional regulator, AraC family protein Neut_1347 1414410 - 1415123 + | prolyl 4-hydroxylase, alpha subunit Neut_1349 1415533 - 1416159 + | 2OG-Fe(II) oxygenase Neut_1350 1416876 - 1416289 - | hypothetical protein Neut_1351 1417277 - 1416897 - | glutaredoxin TERM 1030 1417379 - 1417354 - R 71 -9.1 -3.38118 | gap 1, opp_overlap 1417354 1417356 ATAATGTAGTCACAA GATATCT-GCCC AGA GGGCGAGACATC TAATTTGTACGGCGG Neut_1353 1418104 - 1417631 - | putative transposase Neut_1354 1418942 - 1418334 - | glutathione S-transferase domain-containing protein TERM 1031 1419373 - 1419363 - H 79 -6.8 -4.67982 | CTGCACTCAACAAAA TGGC TAA GCCA GGTGTGCCGGAGTCT TERM 1032 1420124 - 1420145 + G 72 -8.6 -3.86346 | CTCGATATGCTGCTG CCCGCCCG CTTTAT CTGGCGGG TTTATCGGGCCGTGC TERM 1033 1420859 - 1420834 - g 70 -8.9 -3.53091 | AGCTGCGTGGGGAAA GCAGGGCCGTG ATTA CATTGCCCTGC TGGATGAGCTGGATG TERM 1034 1423069 - 1423046 - g 70 -9.7 -3.27951 | overlap 1423044 CAGCCGATCACAACA CGGATCATT GGCAAG AATGATCCG GTACAAATTAATCCA TERM 1035 1423265 - 1423243 - g 83 -9 -4.43477 | GGCATGTAAGCAAAA GGCTGTTGGC ACT GCCCGCAGCC AATATGAAGATGACT Neut_1355 1419881 - 1423447 + | exodeoxyribonuclease V, gamma subunit TERM 1036 1424569 - 1424528 - g 70 -2.3 -5.03314 | gap 1, opp_overlap 1424548, overlap 1424529 TGGATTGCCAAAAAA TTTGACACCATTC-GGAAAC ACC GTTCCCAGATCGGTTTCAAT GATCTGCTGACCGGC TERM 1037 1424879 - 1424905 + G 73 -8.8 -3.76775 | opp_overlap 1424879, overlap 1424870 TTCCGCTCAACCCAA GCGATGGTTGAT GCT GTCAATCATTGC TTTGCATCTGTTGAA TERM 1038 1425181 - 1425167 - g 76 -8.5 -4.17089 | overlap 1425151 GGGAAATCCGCAAAA GCCGG GTTTG CCGGC CAGGACATGTCTTTC Neut_1356 1423463 - 1427149 + | exodeoxyribonuclease V, beta subunit TERM 1039 1428553 - 1428526 - g 82 -7 -4.8543 | opp_overlap 1428531 1428532, overlap 1428532 CAATCTGGAGAAAAA GATACACCGCAA GGAA TTGCGGGTTATC TGGGCATCATTAAAG Neut_1357 1427146 - 1429188 + | exodeoxyribonuclease V, alpha subunit Neut_1358 1430511 - 1429207 - | putative aminopeptidase 2 TERM 1040 1429741 - 1429717 - G 80 -4.4 -5.1861 | gap 1, opp_overlap 1429717, overlap 1429719 TTCATGATCAAAAAA TG-CGCAAACA AACG TATTTGCGGCA TGGTTAAGCGCAGTA TERM 1041 1429793 - 1429811 + g 79 -11.8 -3.1978 | opp_overlap 1429792, overlap 1429787 1429791 CCGGCATGACAGGAC GCCAGATT ATC AATCTGGC TATTGGTATAAAACT Neut_1359 1430962 - 1430534 - | PilT domain-containing protein Neut_1360 1431240 - 1430962 - | hypothetical protein Neut_1361 1432629 - 1431292 - | periplasmic sensor signal transduction histidine kinase TERM 1042 1432265 - 1432289 + g 90 -5.7 -5.29782 | overlap 1432267 1432268 ATAAAGTGTGGTTCG TCATTGAGCAG GAT CTGCTCAAATA TTTTTTCTCCCTGTC TERM 1043 1432267 - 1432287 + g 76 -8.3 -4.2748 | overlap 1432265 1432268 AAAGTGTGGTTCGTC ATTGAGCAG GAT CTGCTCAAA TATTTTTTCTCCCTG TERM 1044 1432268 - 1432286 + g 77 -11.8 -3.15403 | overlap 1432267 1432265 AAGTGTGGTTCGTCA TTGAGCAG GAT CTGCTCAA ATATTTTTTCTCCCT Neut_1362 1433312 - 1432626 - | two component transcriptional regulator, winged helix family protein Neut_1363 1433671 - 1433381 - | peptidase Neut_1364 1434230 - 1433757 - | hypothetical protein Neut_1365 1434408 - 1434959 + | hypothetical protein Neut_1366 1436084 - 1435095 - | integron integrase TERM 1045 1435837 - 1435827 - G 86 -6.8 -4.96848 | TTCCCGATATAAAAA CAGC AAA GCTG AAAGTGCCTGATTCT TERM 1046 1436170 - 1436147 - H 100 -14 -3.61398 | opp_overlap 1436152, overlap 1436132 CCTTCTTGTGAAGAA GTATACACCG CTTG CGGTGTATAC TGAACGTTAGGCGAA Neut_1367 1436210 - 1437010 + | hypothetical protein TERM 1047 1437070 - 1437023 - f 72 -8.4 -3.62522 | gap 2 TAATTCGCCTAACAA TGCGCTCCTGCCGACGTCGGCG TTAACG CGCCGCCG-CGGCAG-AGCTTA GGCGTTAGAGGTCAC TERM 1048 1437557 - 1437580 + G 86 -14.6 -3.06133 | gap 1, opp_overlap 1437548 1437549 TAACAATTCGTTCAA GCCGATGCCGC TTC GCGGCA-CGGC TTAACTCAAGCGTTA Neut_1368 1437087 - 1437584 + | hypothetical protein TERM 1049 1437825 - 1437814 - g 76 -5.8 -4.60041 | opp_overlap 1437814 ACTTACGCTTAAAAA TGGG TTTA CCCA TTTCGCAATTATTGA Neut_1369 1437608 - 1438108 + | hypothetical protein Neut_1370 1438231 - 1438554 + | transposase IS3/IS911 family protein TERM 1050 1439227 - 1439208 - g 70 -4.2 -4.65747 | GAAGCCGGAATAAAA CCCTCGGT CGGC AGCAAGGG CGACAGCTACGACAA Neut_1371 1438611 - 1439459 + | integrase catalytic subunit Neut_1372 1439456 - 1439605 + | hypothetical protein TERM 1051 1439633 - 1439654 + F 70 -5.9 -4.42238 | opp_overlap 1439633 CTGAGTTCGAGGATA TGGATACAC GCGG GTATATCCA TTTTGCTTGCGCTGA Neut_1373 1441061 - 1441936 + | transcriptional regulator, LysR family protein Neut_1374 1441992 - 1442315 + | transposase IS3/IS911 family protein TERM 1052 1442988 - 1442969 - g 70 -4.2 -4.65747 | GAAGCCGGAATAAAA CCCTCGGT CGGC AGCAAGGG CGACAGCTACGACAA Neut_1375 1442372 - 1443220 + | integrase catalytic subunit TERM 1053 1443772 - 1443802 + G 86 -11.8 -3.95153 | opp_overlap 1443775 GAAGCCGAGTCGAGA GGACCTTTTCTGGC GAT GCCGGAAATGGCCC TTTCTCGGTAATTGA TERM 1054 1443932 - 1443904 - g 74 -9.5 -3.53444 | overlap 1443881 CGATTTCGGTCGAAA CGGCCGATCAGGC CGA GACTGATCGACTG TGGACCGCGCTGACC Neut_1376 1443672 - 1444142 + | 3-demethylubiquinone-9 3-methyltransferase TERM 1055 1444765 - 1444797 + G 70 -3.4 -4.82901 | gap 2, overlap 1444756 ATGTGGCGTTGCCAG GCTTGCC-CCAA-GCC CGC GGCGTTGCTGGCACGC TTTTTGTCCACAAGA Neut_1377 1444338 - 1445954 + | Glycerone kinase Neut_1378 1446572 - 1446138 - | hypothetical protein Neut_1379 1449996 - 1446598 - | peptidase M28 TERM 1056 1447165 - 1447154 - G 82 -7.2 -4.65078 | overlap 1447142 1447140 ATACCGGTAACAAAA CCGG CACC CCGG AAAACATGCACTAGC TERM 1057 1449368 - 1449382 + g 76 -6.4 -4.63932 | opp_overlap 1449360 1449368 1449369, overlap 1449369 GCAACCAGATAAATA TCATCC TGC GGATGG TTTTCTTCCCAGATA TERM 1058 1450232 - 1450245 + G 74 -3.7 -4.95547 | opp_overlap 1450232 TTTGCTCGTAATTTA CTGGC AACC GCCTG TTTTCTTGTTATGGC TERM 1059 1450597 - 1450571 - g 70 -2 -4.9448 | overlap 1450572 ATTGAGCAAAGAAAA TCTGGCCAACGC AGG GCGTATGCCTGG GATTATGACGAATTC Neut_1380 1450172 - 1451281 + | WD40 domain-containing protein Neut_1381 1452647 - 1451370 - | cytochrome c, class I Neut_1382 1453363 - 1452644 - | putative cytochrome c TERM 1060 1453764 - 1453777 + G 79 -8.1 -4.42788 | CCCGCCGGAGAATGG CCTGC CGAA GCAGG TTTTCTCGCATTGGG Neut_1383 1453551 - 1453895 + | hypothetical protein Neut_1384 1455737 - 1453884 - | ATP-dependent metalloprotease FtsH TERM 1061 1455251 - 1455265 + g 74 -7.2 -4.2461 | CTCCGGCAACATTGG CAAAAG TGA CTTTTG TTTCTTGCTCAACAT TERM 1062 1455389 - 1455377 - G 76 -3.3 -5.17744 | overlap 1455359 1455378 AGATACCAATAAAAA TTGCC ATC GGCAC TATCCAGGAAAGAAT TERM 1063 1455719 - 1455729 + g 74 -4.6 -4.75372 | GTGTCTTCTTATCCA CCGG CGA CTGG TTTTTCATGAATCCT TERM 1064 1456831 - 1456882 + G 88 -10.2 -4.25104 | gap 1, opp_overlap 1456818 1456834, overlap 1456832 AAGCTGGCGCCGAGA TCAGTACCCGCCCATTT-CAGCTGG TGA CTGGTAGAAAATGGGAGGGTACTGC TTTTGGTGGCGCACG TERM 1065 1456832 - 1456881 + G 81 -13.7 -3.14848 | gap 1, opp_overlap 1456818 1456834, overlap 1456831 AGCTGGCGCCGAGAT CAGTACCCGCCCATTT-CAGCTGG TGA CTGGTAGAAAATGGGAGGGTACTG CTTTTGGTGGCGCAC Neut_1385 1455948 - 1457054 + | alcohol dehydrogenase TERM 1066 1457094 - 1457104 + G 74 -6.8 -4.35461 | CTGGAAATTCGCAGC CAGC ACC GCTG TTTTGGTGGTCTTCA Neut_1386 1457067 - 1457936 + | carboxylesterase Neut_1387 1459394 - 1458222 - | ornithine decarboxylase TERM 1067 1459528 - 1459552 + H 83 -2.9 -5.57054 | overlap 1459530 AAGGCACGCATTATA GGCTTGATTTT TTC AGAATCAAGTA TTTTTTTGCATTATT TERM 1068 1459530 - 1459550 + H 79 -7.7 -4.40173 | overlap 1459528 GGCACGCATTATAGG CTTGATTTT TTC AGAATCAAG TATTTTTTTGCATTA TERM 1069 1459783 - 1459814 + H 72 -7.4 -4.07687 | opp_overlap 1459813, overlap 1459813 GGTACTTAATGCCTC GATTCGCCTGAAAA ATAG TTTTCAGAAGAATC TTTTACGCAAAAGAT Neut_1388 1459919 - 1460188 + | hypothetical protein TERM 1070 1460240 - 1460214 - f 79 -7.9 -4.3739 | CACCCCCCGATAAAA CTGCTGCTGGA TTTTT TCCCGCTGCAG GCATTCGCGCAATAA TERM 1071 1461805 - 1461779 - g 81 -6.4 -5.00616 | overlap 1461781 CTGGCTGTGAAAAAA GGCCAGCAGCTC AGG GTGCTGGTGGAC ACAGTTGATGAAGAA Neut_1389 1460630 - 1461967 + | MiaB-like tRNA modifying enzyme YliG TERM 1072 1462019 - 1462040 + F 73 -4.4 -4.75372 | opp_overlap 1462019, overlap 1462014 TGCCTGCCCGCAAAA GTGGCATT TGTATC ATTGCCAC TTTTTCCTCAATCCT Neut_1390 1462570 - 1463400 + | PEP motif-containing protein TERM 1073 1463412 - 1463432 + F 100 -12.6 -3.91434 | opp_overlap 1463412, overlap 1463430 CTAATCTACCATCAA GCCGGAGA ATCTA TCTCCGGC TTTCTAAAGTCATTT TERM 1074 1463432 - 1463412 - f 86 -12.6 -3.2327 | opp_overlap 1463412 1463430 CTAATCTACCATCAA GCCGGAGA ATCTA TCTCCGGC TTTCTAAAGTCATTT Neut_1391 1463690 - 1464007 + | BolA family protein TERM 1075 1464629 - 1464645 + G 73 -8.7 -3.79251 | opp_overlap 1464613 AACAAGCGATTGCTG TTCCGCC CAC GGTGGAA TTTGGTGCTCCGGTA Neut_1392 1464067 - 1464672 + | LemA family protein TERM 1076 1465405 - 1465417 + G 76 -7.7 -4.31433 | GATCGCTGTCCTAAT TGCCA TCG TGGCA TTTGTTATCAGCCTG Neut_1393 1464692 - 1465576 + | hypothetical protein Neut_1394 1465590 - 1466093 + | hypothetical protein Neut_1395 1466393 - 1466896 + | RNA polymerase factor sigma-70 Neut_1396 1466893 - 1467615 + | hypothetical protein TERM 1077 1467647 - 1467633 - f 71 -10 -2.83022 | opp_overlap 1467632 1467644, overlap 1467632 CAACCAAGATATAAT CCGGAT TTG ATCCGG CTGCTTCGGTTTCAT TERM 1078 1467998 - 1468020 + G 74 -11.3 -3.06261 | gap 1, opp_overlap 1468001 TCGAACTGTCTGACA CCAGCGC-CC GTCT GGCGCGCTGG TATTGCACATTGAGC TERM 1079 1468161 - 1468135 - g 80 -10.2 -3.80733 | overlap 1468124 1468152 1468155 GGGATGGCAGAACAA GCCAGCAGTA ACCAGAA TACCGCTGGC AACGATGACAGTAGT Neut_1397 1467709 - 1470027 + | ABC transporter-related protein TERM 1080 1470456 - 1470481 + G 78 -2 -5.24129 | opp_overlap 1470463, overlap 1470456 1470458 CGGTTGATACTGGAT C-ATCACAGCAA CAGA TTGCTG-GATCG TTTTTTGTGAAACAA Neut_1398 1470024 - 1470491 + | hypothetical protein Neut_1399 1470673 - 1470458 - | hypothetical protein Neut_1400 1470954 - 1470721 - | hypothetical protein TERM 1081 1470753 - 1470773 + g 100 -12.6 -4.19336 | overlap 1470763 TTTTCTCATCAGTTG CGCTTGCC CACTT GGCAAGCG TTTCTTCCAATGCTT Neut_1401 1471004 - 1473301 + | cyanophycin synthetase TERM 1082 1474494 - 1474478 - g 71 -10.9 -3.10409 | opp_overlap 1474477 1474476 1474475 CAGCAAGGGATGTAA CGGATGA AGT TCATCCG GATATTGCTGATTGC Neut_1402 1473322 - 1475910 + | cyanophycin synthetase Neut_1403 1477001 - 1476057 - | multicopper oxidase, type 3 Neut_1404 1477428 - 1477045 - | cytochrome c, class I Neut_1405 1478126 - 1477428 - | cytochrome c, class I Neut_1406 1479225 - 1478164 - | multicopper oxidase, type 3 TERM 1083 1478191 - 1478217 + g 76 -4.5 -5.03145 | overlap 1478185 GAGTTCTCCTTTGAA GACTTTCGAAT TATGC ATTCCGAAGTC TTTTTTCAGAGATTC TERM 1084 1478921 - 1478977 + g 75 -10.2 -3.43619 | gap 2, overlap 1478927 ACACCATCGTTCTGC CAGGTACCGCGCTGAAGCATGCCGTGCC AGT GG-ATGGTATGCGGCAGCGTGGT-CATG TTGGTTACATTTACT TERM 1085 1478927 - 1478972 + g 79 -13.3 -2.80966 | gap 1, overlap 1478921 TCGTTCTGCCAGGTA CCGCGCTGAAGCATGCCGTGCC AGT GG-ATGGTATGCGGCAGCGTGG TCATGTTGGTTACAT Neut_1407 1479526 - 1479990 + | transcriptional regulator, BadM/Rrf2 family protein Neut_1408 1483877 - 1479978 - | hypothetical protein TERM 1086 1480224 - 1480208 - G 72 -9.5 -3.4158 | opp_overlap 1480207 TTGAAAAATCATCAA TACCCAA CCC TTGGGTA ATACTGTCCAGAACA TERM 1087 1482937 - 1482955 + g 70 -8.1 -3.73775 | opp_overlap 1482931, overlap 1482938 ACAGTAATACGCCCT TCCAGGC GCTCA GCCTGGG TTTGCTCAAGATAAC Neut_1409 1485528 - 1483879 - | surface antigen (D15) Neut_1410 1485830 - 1486480 + | uracil-DNA glycosylase superfamily protein TERM 1088 1486567 - 1486552 - g 76 -3.2 -5.20534 | ACCAACGAACAAAAA CAGCAG ATCG CCACTG AAATTACCGACACGC Neut_1411 1486501 - 1486689 + | 4-oxalocrotonate tautomerase Neut_1412 1486703 - 1488517 + | excinuclease ABC, C subunit Neut_1414 1489709 - 1489467 - | hypothetical protein TERM 1089 1490098 - 1490066 - H 89 -14.4 -2.94912 | opp_overlap 1490070, overlap 1490070 TCCTCAAGTTATACA CAAACTTATCCACA GGAAT TGTGGACAAGTTTG TACGTAATCGAAGCA TERM 1090 1490094 - 1490070 - H 81 -9.4 -4.15061 | opp_overlap 1490070, overlap 1490066 CAAGTTATACACAAA CTTATCCACA GGAAT TGTGGACAAG TTTGTACGTAATCGA TERM 1091 1490070 - 1490094 + H 72 -7.9 -3.93695 | opp_overlap 1490070 1490066 CAAGTTATACACAAA CTTATCCACAG GAA TTGTGGACAAG TTTGTACGTAATCGA TERM 1092 1490163 - 1490153 - H 71 -4.6 -4.60924 | opp_overlap 1490153 1490154 TAAACTTTCTAAAAA CACG CAT CGCG ATTGTTACAATCTCA TERM 1093 1490700 - 1490677 - g 74 -8.1 -4.03413 | ATCTGCTTACACAAA CGCTACCCC GACCCT GGCGTAGCG AAGACAGCCTGTTGA Neut_1415 1490211 - 1492592 + | penicillin amidase TERM 1094 1493936 - 1493911 - g 73 -11.1 -2.92642 | opp_overlap 1493909 1493908 ATCAGCATTCATATA CCGCCAGTGCG TGAA CGCATTGGCGA CGCTGTATTGCTTGC Neut_1416 1492957 - 1494315 + | two component, sigma54 specific, transcriptional regulator, Fis family protein Neut_1417 1494356 - 1495945 + | AMP-dependent synthetase and ligase Neut_1418 1495942 - 1497177 + | Orn/DAP/Arg decarboxylase 2 TERM 1095 1497479 - 1497447 - g 75 -9.3 -3.87869 | gap 1, opp_overlap 1497450 1497458, overlap 1497450 GCAATCCTGCACAAA CAACAGCACAAGGC AGCGCA GCCCTGT-CTGTTG TTGCAAAAGCAAGCC Neut_1419 1497335 - 1499182 + | asparagine synthase (glutamine-hydrolyzing) TERM 1096 1499860 - 1499875 + G 85 -4 -5.42259 | gap 1 CTGAAATATCCCGCT TCGC-CA TAC TGAGCGA TTTTTTTAAACGTAA Neut_1420 1499502 - 1500314 + | hypothetical protein Neut_1421 1500985 - 1500515 - | transposase, IS4 family protein Neut_1423 1501394 - 1501633 + | hypothetical protein Neut_1424 1501626 - 1502852 + | hypothetical protein Neut_1425 1502852 - 1505806 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 1097 1505850 - 1505835 - T 100 -11.8 -5.61596 | ATGCGGATAAAAAAA CCGCCC CGAG GGGCGG TTAGAAAATTTGAAC Neut_1426 1506701 - 1506285 - | OsmC family protein Neut_1427 1507775 - 1506702 - | DNA polymerase III, delta subunit Neut_1428 1508284 - 1507790 - | rare lipoprotein B leuS 1510910 - 1508304 - | leucyl-tRNA synthetase TERM 1098 1509153 - 1509166 + g 80 -9.5 -4.07885 | opp_overlap 1509152 ATTGAAGTACTGAAT CCGGC CGTT GCCGG TTTTACGGAAAAATA TERM 1099 1509987 - 1509998 + g 95 -2.2 -5.86061 | opp_overlap 1509983 CAGGACATACAGCCC GGTA GCCA TGCC TTTTTTTTCCTGGAG TERM 1100 1512036 - 1512053 + G 76 -2.7 -5.15969 | TGCCTATCAGCACGC CGTTAAT AATC ATTATCG TTTTTTCAGTTACGG Neut_1430 1511065 - 1512105 + | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase Neut_1431 1512102 - 1513187 + | queuine tRNA-ribosyltransferase TERM 1101 1513602 - 1513586 - g 71 -6.5 -4.15657 | TCAGAAGCATAGAAA CCGGC AAAAGCA GCCGG GCACTCAAAAGCGGC Neut_1432 1513252 - 1513716 + | preprotein translocase, YajC subunit TERM 1102 1514003 - 1513985 - g 71 -6 -4.3534 | overlap 1513987 CCTTAACCAGCAAAA TCTTCCGT ATA ACGGAACA ATACTGGAAGCAACC secD 1513803 - 1515650 + | preprotein translocase subunit SecD secF 1515675 - 1516607 + | preprotein translocase subunit SecF Neut_1435 1516647 - 1517024 + | hypothetical protein Neut_1436 1517077 - 1517808 + | ubiquinone/menaquinone biosynthesis methyltransferases Neut_1437 1518829 - 1517861 - | agmatinase Neut_1438 1519475 - 1518993 - | lipoprotein signal peptidase ileS 1522324 - 1519517 - | isoleucyl-tRNA synthetase Neut_1440 1523303 - 1522326 - | riboflavin biosynthesis protein RibF TERM 1103 1522425 - 1522439 + g 70 -2.8 -4.79826 | overlap 1522436 TTGTTTCACAAGCGT TTCCAT ATC AGGGAA TTTTTCCTCATCTCT Neut_1441 1523846 - 1523415 - | putative sec-independent protein translocase protein TatC TERM 1104 1525815 - 1525828 + G 76 -3.1 -5.18726 | opp_overlap 1525807, overlap 1525804 CAGATTATCCGGATC CGGAA AACT TTCTG TTTTTATTGTACGGG Neut_1442 1524113 - 1526257 + | extracellular solute-binding protein TERM 1105 1526813 - 1526840 + G 76 -6.2 -4.65747 | gap 1, overlap 1526817 CCCATATCCGGATAC GCCAGCGGGCTGG ATG CCA-CCCGCTTCC TTTTGTTGCCCATTA TERM 1106 1526817 - 1526836 + G 78 -10 -3.82261 | gap 1, overlap 1526813 TATCCGGATACGCCA GCGGGCTGG ATG CCA-CCCGC TTCCTTTTGTTGCCC TERM 1107 1527063 - 1527076 + G 82 -3.9 -5.28683 | TATTTCTTGGAGGAC TGATT ACTG AATCA TTTTTTGGTATTCCT Neut_1443 1526267 - 1527244 + | binding-protein-dependent transport systems inner membrane component Neut_1444 1527376 - 1529031 + | diguanylate cyclase Neut_1445 1529080 - 1530024 + | heat shock protein DnaJ domain-containing protein Neut_1446 1530027 - 1530332 + | regulatory proteins, MerR family protein TERM 1108 1531030 - 1531000 - g 84 -11.2 -3.93673 | opp_overlap 1531004, overlap 1531003 CAAATATCCGACAAA GAGCTCCGGTTGAT GAC ATCAACCGGATTTC ACTCGCGGGAAAGTC TERM 1109 1531027 - 1531003 - g 71 -11.5 -2.72186 | opp_overlap 1531004, overlap 1531000 ATATCCGACAAAGAG CTCCGGTTGAT GAC ATCAACCGGAT TTCACTCGCGGGAAA TERM 1110 1531004 - 1531026 + G 91 -15 -3.64703 | opp_overlap 1531003 1531000 TATCCGACAAAGAGC TCCGGTTGAT GAC ATCAACCGGA TTTCACTCGCGGGAA Neut_1447 1530420 - 1531283 + | hypothetical protein Neut_1448 1531300 - 1531839 + | NUDIX hydrolase TERM 1111 1532957 - 1532982 + T 91 -11.3 -4.00868 | GCGGAAATGTTTTCA TCGTTTTGTTG AGGC CAACAGAACGA TTTAATTCTCGATAA TERM 1112 1533042 - 1533011 - T 89 -8.8 -4.79683 | gap 1, opp_overlap 1533040 AATTGATAAAAGAAA TCCCCCGCCATCGAG GAG CT-AATGACAGGGGA TTGAGGGATCCTGAT TERM 1113 1533206 - 1533176 - T 100 -13.3 -3.51232 | opp_overlap 1533174, overlap 1533177 CTCTCCGTAAAGGAA TCCCCTGCCACCA GGGGG TGATGGCAGGGGC AGATGCTGTCAAATG TERM 1114 1533205 - 1533177 - T 100 -16.8 -2.70525 | opp_overlap 1533174, overlap 1533176 TCTCCGTAAAGGAAT CCCCTGCCACCA GGGGG TGATGGCAGGGG CAGATGCTGTCAAAT TERM 1115 1533256 - 1533239 - T 78 -11.3 -2.96517 | overlap 1533236 AGCTATCAAGAAGGA GCGTGAG TTGC CTCACGC ACAACCATGTTATTC Neut_1449 1533842 - 1533357 - | hypothetical protein TERM 1116 1533812 - 1533784 - G 100 -13.1 -5.24129 | TGCCCGCATAAAAAA GCCCCGCTCGCCA ATC CGACAAGCAGGGC AATGGTGGCAGCGGT Neut_1450 1534089 - 1533832 - | hypothetical protein Neut_1451 1534583 - 1534092 - | hypothetical protein Neut_1452 1534903 - 1534583 - | hypothetical protein Neut_1453 1535232 - 1534900 - | hypothetical protein TERM 1117 1535321 - 1535358 + r 70 -9.9 -2.92936 | gap 1, opp_overlap 1535322 1535326, overlap 1535326 CAAGGGGCAGAAACA AGAAAGCCCCATAGCGTT GCG AGCGCC-TGGGGCTTTCG TCTAATTCAGTGATT TERM 1118 1535357 - 1535322 - R 100 -13.4 -4.07535 | gap 1, opp_overlap 1535321 1535326, overlap 1535326 AAGGGGCAGAAACAA GAAAGCCCCATAGCGTT GCG AGCGCC-TGGGGCTTTC GTCTAATTCAGTGAT TERM 1119 1535353 - 1535326 - R 89 -8.4 -4.63048 | gap 1, opp_overlap 1535326 1535321, overlap 1535322 GGCAGAAACAAGAAA GCCCCATAGCGTT GCG AGCGCC-TGGGGC TTTCGTCTAATTCAG TERM 1120 1535326 - 1535353 + r 76 -8.4 -3.889 | gap 1, opp_overlap 1535322 1535326, overlap 1535321 GGCAGAAACAAGAAA GCCCCATAGCGTT GCG AGCGCC-TGGGGC TTTCGTCTAATTCAG Neut_1454 1536420 - 1535485 - | hypothetical protein TERM 1121 1535652 - 1535619 - G 74 -8.3 -4.09685 | gap 1, opp_overlap 1535642 1535645 TGGCATCTGTCAAAA TTTCACC-TAAAAGCG CCC CGCTTTCACGGTGATA ACATCGTGCTATATA Neut_1455 1539213 - 1536430 - | hypothetical protein TERM 1122 1539181 - 1539195 + g 81 -6.4 -5.03314 | CCCGACATAGTATTT GTAGCC GAC GGTTAC TTTTTTAGAGCTGCC Neut_1456 1539403 - 1539200 - | hypothetical protein TERM 1123 1539350 - 1539336 - G 86 -3.4 -5.60993 | overlap 1539337 TGGTGCAGAAAAAAA TCGCGG GTA CCACGG CTGCACATGCCTGCC Neut_1457 1539627 - 1539400 - | hypothetical protein Neut_1458 1540345 - 1539635 - | hypothetical protein Neut_1459 1541571 - 1540402 - | hypothetical protein TERM 1124 1540985 - 1541006 + g 72 -8 -3.9281 | opp_overlap 1540987 ACGTCGTAGCCGAGA TACTGGCC CGGTGT GGCCGGTA TTATTTCCGAATAAT Neut_1460 1543939 - 1541564 - | hypothetical protein TERM 1125 1542009 - 1542034 + g 76 -7.5 -4.34267 | opp_overlap 1541995 ACTGCCTGAGTAATG GCAGCTGCTTT GCCC AGCGCGGCTGC TTTTGCATTCTGTGA TERM 1126 1543101 - 1543113 + g 74 -7.7 -4.25283 | opp_overlap 1543078 1543100, overlap 1543080 1543079 ACGCTTTCCATCAAT GCGTT GGT AACGC TTTTGATCGCCGCCT Neut_1461 1544184 - 1543936 - | hypothetical protein Neut_1462 1544573 - 1544223 - | hypothetical protein Neut_1463 1545298 - 1544582 - | major tail protein, putative Neut_1464 1545666 - 1545304 - | hypothetical protein Neut_1465 1546196 - 1545663 - | phage protein, HK97 gp10 family protein TERM 1127 1545830 - 1545840 + g 72 -8.2 -3.84017 | opp_overlap 1545822 1545825 GCCAATAGAAGGTAT CCCC TCC GGGG TTATCTTTGCCCTTC Neut_1466 1546531 - 1546196 - | phage head-tail adaptor, putative Neut_1467 1547090 - 1546533 - | hypothetical protein TERM 1128 1546737 - 1546709 - G 79 -6.5 -4.72333 | opp_overlap 1546724 1546726 1546728, overlap 1546699 1546712 AACCACAGGCAAAAA CTACCCGGAGGAT CCC ACCCGCCGGGATG GCGGCGTCTTCTGAA TERM 1129 1546734 - 1546712 - G 76 -11.2 -3.27476 | opp_overlap 1546724 1546726 1546728, overlap 1546699 1546709 CACAGGCAAAAACTA CCCGGAGGAT CCC ACCCGCCGGG ATGGCGGCGTCTTCT TERM 1130 1547124 - 1547101 - R 100 -14.6 -5.19212 | gap 1 AGCATGATTAAAAAA CCCGCCA-GGG TTG CCCGTGGCGGG TGCAGTAGCTGCGAG Neut_1468 1547446 - 1547147 - | hypothetical protein Neut_1469 1548682 - 1547456 - | phage major capsid protein, HK97 family protein TERM 1131 1548712 - 1548743 + r 77 -9.4 -3.65046 | gap 1, opp_overlap 1548716, overlap 1548714 1548716 GATTGGTGGCAATAA AAAACCCGCCA-GGG TTG CCCGTGGCGGGTGTC TTGTTGGCGTGGGAG TERM 1132 1548714 - 1548741 + r 85 -12 -3.40611 | gap 1, opp_overlap 1548716, overlap 1548712 1548716 TTGGTGGCAATAAAA AACCCGCCA-GGG TTG CCCGTGGCGGGTG TCTTGTTGGCGTGGG TERM 1133 1548716 - 1548739 + r 95 -14.6 -3.27158 | gap 1, opp_overlap 1548716, overlap 1548714 1548712 GGTGGCAATAAAAAA CCCGCCA-GGG TTG CCCGTGGCGGG TGTCTTGTTGGCGTG TERM 1134 1548739 - 1548716 - R 100 -14.6 -5.4505 | gap 1, opp_overlap 1548716 1548714 1548712 GGTGGCAATAAAAAA CCCGCCA-GGG TTG CCCGTGGCGGG TGTCTTGTTGGCGTG Neut_1470 1549450 - 1548764 - | peptidase S14, ClpP TERM 1135 1548817 - 1548847 + g 72 -8.2 -3.83568 | AACCAGTATCGATTT TCGGTAGATCCTGT TCT GCTGGCTCTGCCGA TTGTTGTGCCTGTCG Neut_1471 1550753 - 1549461 - | phage portal protein, HK97 family protein TERM 1136 1549617 - 1549627 + g 71 -6.8 -4.13767 | GGCTACCCGGTAGGC CTCG TAG CGAG TTTTCAGATCACCGC TERM 1137 1550699 - 1550723 + g 82 -7.2 -4.68655 | gap 2, overlap 1550698 CCATCCACTGTTTCA GCACGACACTGC CTG GC-GTG-CGTGC TTTGTTTTGGACTTC Neut_1472 1552423 - 1550750 - | phage terminase TERM 1138 1552327 - 1552313 - G 100 -4.9 -5.76949 | opp_overlap 1552313 CAGGTCGAAAAAAAA GCCCC GTGAA GGAGC TTGCTCTAAATCTTC Neut_1473 1552892 - 1552428 - | phage terminase, small subunit, putative, P27 family protein Neut_1474 1553428 - 1553024 - | HNH endonuclease TERM 1139 1553369 - 1553386 + g 76 -11.3 -3.19687 | opp_overlap 1553369, overlap 1553367 1553365 1553363 ACGGCCATAAAAAAA CCCGTTC GGGG GAACGGG TCTCTGTTTAGCGTT TERM 1140 1553386 - 1553369 - G 100 -11.3 -5.61596 | opp_overlap 1553369 1553367 1553365 1553363 ACGGCCATAAAAAAA CCCGTTC GGGG GAACGGG TCTCTGTTTAGCGTT Neut_1475 1553712 - 1553434 - | hypothetical protein Neut_1476 1553746 - 1553985 + | hypothetical protein Neut_1477 1554409 - 1554170 - | hypothetical protein Neut_1478 1555944 - 1554718 - | virulence-associated E family protein TERM 1141 1555567 - 1555549 - G 84 -10.2 -3.96624 | overlap 1555536 1555552 CATCCCCACCAGAAA CCAGCGGG CAA CCCGCCAG ACATACTTTGACTTT TERM 1142 1555564 - 1555552 - G 71 -10.5 -3.04122 | overlap 1555536 1555549 CCCCACCAGAAACCA GCGGG CAA CCCGC CAGACATACTTTGAC TERM 1143 1555796 - 1555818 + g 70 -8.4 -3.66178 | opp_overlap 1555811, overlap 1555797 TTCCATTCACCCGTT TCACCGCC CACAAAT GGCGGTGG TTTCAGCTTCACCAC TERM 1144 1556703 - 1556721 + H 75 -4.5 -4.98616 | AAAGAGATCGCTTCC TCGCTGG CTTAT CCAACGA TTTTTCCTCTTTTGC Neut_1480 1557117 - 1557434 + | hypothetical protein Neut_1481 1557441 - 1557719 + | transcriptional regulator, XRE family protein Neut_1482 1558146 - 1557841 - | hypothetical protein Neut_1483 1558394 - 1558143 - | hypothetical protein TERM 1145 1558858 - 1558847 - g 70 -2.2 -4.99043 | TCTGGACAAACAAAA CTCG GACC CAAG CCCCTGTTGGCACTC Neut_1484 1558451 - 1559485 + | putative phage repressor Neut_1485 1559565 - 1560542 + | SppA protein Neut_1486 1560736 - 1561140 + | hypothetical protein Neut_1487 1561137 - 1561685 + | hypothetical protein Neut_1488 1561690 - 1562100 + | hypothetical protein TERM 1146 1562238 - 1562221 - T 100 -10.5 -5.24531 | ACTCCCCATAAAAAA CCCGCCA GTGA CGGCGGG CAAAAGACTTCAAAA Neut_1489 1562806 - 1562561 - | hypothetical protein Neut_1490 1563145 - 1563501 + | 17 kDa surface antigen Neut_1491 1563942 - 1564436 + | nuclease TERM 1147 1564612 - 1564588 - T 83 -5.7 -5.3104 | overlap 1564590 CCAGGAAAAAGAAAA CCCACCC CTGGTGCTGCT GGGTGGG CCGTGTTGGAATCAA TERM 1148 1564761 - 1564743 - T 74 -7.3 -4.21772 | opp_overlap 1564744, overlap 1564740 1564744 CTTAACAAATAACAA GGCCCGC CTAGT GCGGGCT TTCTGTTATCCACCA TERM 1149 1564744 - 1564760 + T 88 -10.8 -4.27117 | opp_overlap 1564744 1564743 1564740 TTAACAAATAACAAG GCCCGC CTAGT GCGGGC TTTCTGTTATCCACC TERM 1150 1564760 - 1564744 - T 76 -10.8 -3.11979 | opp_overlap 1564744, overlap 1564743 1564740 TTAACAAATAACAAG GCCCGC CTAGT GCGGGC TTTCTGTTATCCACC TERM 1151 1564976 - 1564960 - T 71 -2.2 -5.14163 | ATTCATTAATAAAAA CAATGG GATAA CCATGG ATGCTGGGTAAGGGG Neut_1492 1565958 - 1565059 - | hypothetical protein Neut_1493 1566498 - 1566782 + | hypothetical protein Neut_1494 1566779 - 1567261 + | hypothetical protein Neut_1495 1567276 - 1567638 + | hypothetical protein TERM 1152 1567916 - 1567905 - g 90 -5.8 -5.31877 | AGCCAGCAGAAAAAA TGCC TTAA GGCA CGGCTGGAATATGCG Neut_1496 1567648 - 1568031 + | hypothetical protein Neut_1497 1568227 - 1568727 + | hypothetical protein Neut_1498 1568730 - 1569755 + | phage integrase family protein TERM 1153 1570039 - 1570059 + F 77 -4.7 -5.03994 | AACGGTGCTAAATCC GGTTATTTC ATT GAATTGACC TTTTTATATGTCGAG Neut_1499 1570067 - 1570378 + | exodeoxyribonuclease VII small subunit Neut_1500 1570368 - 1571261 + | polyprenyl synthetase TERM 1154 1572125 - 1572109 - g 78 -9.5 -3.94634 | overlap 1572115 TACTACGCTAAATAA CATCAAG CAG CTTGATG GGCCGCAATTCCTGC Neut_1501 1571324 - 1573168 + | 1-deoxy-D-xylulose-5-phosphate synthase Neut_1502 1573284 - 1574087 + | putative GTP cyclohydrolase Neut_1503 1574254 - 1574874 + | hypothetical protein Neut_1504 1575643 - 1574903 - | pteridine reductase TERM 1155 1576414 - 1576425 + G 71 -5.8 -4.40358 | CAGTGAAATCAGCCT TGCC AACC GGCA TTTTATCCACTCCCT Neut_1505 1575716 - 1576891 + | hypothetical protein Neut_1506 1577631 - 1576888 - | purine phosphorylases family protein 1 Neut_1507 1579640 - 1577628 - | squalene-hopene cyclase TERM 1156 1578731 - 1578709 - G 77 -13.6 -2.50816 | overlap 1578708 TCGTGACCCAGCAAT GTTAATGCCT CAT AGGCATTAAC CATCGCCGGAAAAAT Neut_1508 1580623 - 1579775 - | VacJ family lipoprotein Neut_1509 1581388 - 1580780 - | MotA/TolQ/ExbB proton channel TERM 1157 1581449 - 1581463 + H 71 -4.3 -4.7254 | CAACACCAGTATGCT TTGCT CAACC AGCAA TTTTTACTGAAAGGT Neut_1510 1581688 - 1583034 + | exodeoxyribonuclease VII, large subunit Neut_1511 1583099 - 1583479 + | hypothetical protein TERM 1158 1584276 - 1584264 - g 71 -5.5 -4.57205 | overlap 1584265 AAAAACTTAAACAAA CGGCT GCA AACCG CCAACGTGAACGTAT Neut_1512 1583540 - 1584724 + | putative RNA methylase Neut_1513 1584734 - 1585222 + | disulphide bond formation protein DsbB Neut_1514 1585499 - 1585894 + | endoribonuclease L-PSP Neut_1515 1586408 - 1586061 - | hypothetical protein Neut_1516 1586463 - 1587137 + | ABC transporter-related protein Neut_1517 1587134 - 1589683 + | hypothetical protein Neut_1518 1589683 - 1590753 + | putative AttH Neut_1519 1590833 - 1591075 + | SirA family protein TERM 1159 1591348 - 1591365 + F 74 -4.1 -4.91109 | opp_overlap 1591348 1591349 1591351, overlap 1591349 AATATGCTCTTATAA GTACCTG AAAA CAGGTAG TTTTTATACTAAAAC TERM 1160 1591862 - 1591847 - g 76 -6.8 -4.53303 | overlap 1591848 1591856 GATGGTTATATAAAA CCCGCA ATAC TGCGGA ACAGCTCGCCAATCT Neut_1520 1591567 - 1592391 + | ammonia monooxygenase/methane monooxygenase, subunit C TERM 1161 1592601 - 1592641 + T 81 -12 -3.01712 | gap 1, opp_overlap 1592601 1592602 GAAATTTCTACAGAA CTGGCGGCAGACAGC-ATT TAAT AATCGTTGTCTGCCGCCGC TGTTACAAGACAGAC TERM 1162 1592640 - 1592601 - T 88 -12.2 -3.51161 | gap 1, opp_overlap 1592601, overlap 1592602 GAAATTTCTACAGAA CTGGCGGCAGACAGCATTT AAT AATCGTTGTCTGCCGCC-G CTGTTACAAGACAGA TERM 1163 1592640 - 1592602 - T 82 -12.4 -2.70215 | opp_overlap 1592601, overlap 1592601 AAATTTCTACAGAAC TGGCGGCAGACAGCATTT AAT AATCGTTGTCTGCCGCCG CTGTTACAAGACAGA Neut_1521 1593645 - 1592716 - | cytochrome-c peroxidase Neut_1522 1593821 - 1594036 + | transposase and inactivated derivatives TERM 1164 1595151 - 1595166 + G 74 -2.5 -5.08601 | TTTGTAGCCATTGAC CGGAC ATCAAA GTTCG TTTTTGTTCAACTCC Neut_1524 1594728 - 1595675 + | integrase catalytic subunit Neut_1525 1596420 - 1595719 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Neut_1526 1596488 - 1596928 + | signal-transduction protein Neut_1527 1597903 - 1596983 - | hypothetical protein TERM 1165 1597788 - 1597777 - G 70 -2.2 -4.93296 | CCAGCAGTATAAAAA TACC CGTG GGCA AGCTCAGAACAATAC Neut_1528 1598562 - 1597900 - | cell division ATP-binding protein FtsE Neut_1529 1599626 - 1598589 - | signal recognition particle-docking protein FtsY TERM 1166 1599485 - 1599499 + g 70 -10 -3.21276 | overlap 1599484 GCTGTCGTGTGCGTG TCAGGC CCT GCCTGA TCTTATCGGCGAAAC Neut_1530 1599693 - 1601084 + | peptidase M16 domain-containing protein Neut_1531 1601211 - 1602296 + | alanine racemase Neut_1532 1603119 - 1602325 - | PpiC-type peptidyl-prolyl cis-trans isomerase Neut_1533 1603595 - 1603293 - | YciI-like protein Neut_1534 1604862 - 1603708 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1167 1604759 - 1604744 - G 80 -4.6 -5.06414 | overlap 1604729 GGCTTTGAATAAAAA CCGCCA TGAT CGGCAG ATAAGAGAGTGATTG Neut_1535 1605179 - 1606057 + | heat shock protein HtpX TERM 1168 1606104 - 1606065 - T 89 -14.2 -2.94099 | overlap 1606068 CTGCCTGATGATAGA GCAGCCGGGGCTGGTGAA TCCT TACACCAGCCCCGGCAAA AATGTAAATAACCAT TERM 1169 1606101 - 1606068 - T 100 -22.5 -2.71268 | overlap 1606065 CCTGATGATAGAGCA GCCGGGGCTGGTGAA TCCT TACACCAGCCCCGGC AAAAATGTAAATAAC Neut_1536 1606908 - 1606129 - | VacJ family lipoprotein Neut_1537 1608340 - 1607057 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 1170 1608252 - 1608238 - G 100 -4.2 -5.75342 | overlap 1608242 CGCGCTGAAAAAAAA TAGGCG TAC CTCCTA CGGATTTAAAAGCAC Neut_1538 1609015 - 1608377 - | thiamine-phosphate pyrophosphorylase TERM 1171 1608616 - 1608606 - G 70 -3.2 -4.88067 | ATTGACGGATAAAAA GCAC CAA ATGC AACATAATCTGCTCC Neut_1539 1609850 - 1609008 - | phosphomethylpyrimidine kinase Neut_1540 1609903 - 1610091 + | rubredoxin-type Fe(Cys)4 protein Neut_1541 1610091 - 1610480 + | lactoylglutathione lyase TERM 1172 1610483 - 1610473 - f 80 -5.4 -5.10933 | TTATTCAAAAGAAAA CAGT GTA ACTG ATGTTGCCATGGGGA Neut_1542 1610669 - 1611034 + | iron-sulfur cluster insertion protein ErpA anmK 1612134 - 1611043 - | anhydro-N-acetylmuramic acid kinase Neut_1544 1613501 - 1612170 - | peptidase M23B TERM 1173 1613225 - 1613181 - G 72 -8.1 -3.94409 | gap 1 GACAGTATCTAGAAA GCGATTCTTG-TCTTTTTGA CTGATT TCAAGACGAGCAAGAATCGC CGAAATGGTATCTCC TERM 1174 1614229 - 1614205 - g 70 -9.3 -3.59946 | GCGTGAATTACAGAA GCACTACGG CCAATCT CCGCAGTGC ATACTGACCATGCCA Neut_1545 1613594 - 1614814 + | tyrosyl-tRNA synthetase Neut_1546 1615917 - 1615081 - | short-chain dehydrogenase/reductase SDR Neut_1547 1616900 - 1615914 - | oxidoreductase domain-containing protein TERM 1175 1616664 - 1616677 + g 71 -6.7 -4.17657 | ACACCCTGCCTTGAG CGCTT CGAT AAGCG TTTTCAGGTGTAATG Neut_1548 1617613 - 1616897 - | N-acylneuraminate cytidylyltransferase TERM 1176 1617369 - 1617354 - G 76 -4.6 -5.05782 | AGCCAGCTCAAAAAA TGCAGG AATA CCGGCA GATCCCGCGTATCAT TERM 1177 1617427 - 1617414 - G 76 -4.5 -5.00884 | opp_overlap 1617420 ACCGGTCTCAAAAAA GGAAC CTCC GCTCC GGCATTTCTTGCAAT TERM 1178 1617565 - 1617548 - G 74 -4.1 -4.96848 | CTTGCCACATAAAAA CCGGATA TTTT TATGCGG AACAGCTTTTGACCC Neut_1549 1617931 - 1620180 + | N-acylneuraminate-9-phosphate synthase TERM 1179 1620399 - 1620450 + G 79 -7.8 -4.45765 | gap 1 TGCAAAACTCCTGCT GGCATGCGTAGCAGCTGAGCGCGGG TTT CCGGTGATCATCGGCT-CGCGGGCC TTTATTCATTTTGAA TERM 1180 1620934 - 1620913 - g 100 -8.7 -5.36441 | GGTGGAGATAAAAAA TCCCGGC GCGGACAG GCCGGGA TCGGCATGAGTGAAG Neut_1550 1620322 - 1621725 + | hypothetical protein Neut_1551 1622436 - 1621954 - | transcriptional regulator NrdR Neut_1552 1623763 - 1622513 - | serine hydroxymethyltransferase TERM 1181 1623052 - 1623072 + g 71 -5.3 -4.43844 | TAGCCATGATCACGC CACCACGCG GGC CACGTAGTG TTTTGTGCGTGCTAC Neut_1553 1623957 - 1624697 + | TENA/THI-4 domain-containing protein TERM 1182 1624729 - 1624765 + T 72 -6.6 -4.21631 | gap 1, opp_overlap 1624740, overlap 1624730 TTACAACAGTTTACG CCGGGCAATCATCCC CAGTTTAA GGGG-GATTGCCCGA TTTCTTGAGTCCCTT TERM 1183 1624730 - 1624764 + T 73 -10.1 -3.12256 | gap 1, opp_overlap 1624740, overlap 1624729 TACAACAGTTTACGC CGGGCAATCATCCC CAGTTTAA GGGG-GATTGCCCG ATTTCTTGAGTCCCT Neut_1554 1625734 - 1624799 - | transcriptional regulator, LysR family protein TERM 1184 1625869 - 1625854 - g 70 -9 -3.6164 | AATACTGACACATAA TCTCGG CTTC CCGAGA ATCGGTGCACAACGT TERM 1185 1626791 - 1626772 - g 77 -12.2 -3.06183 | opp_overlap 1626769 1626768 TGTATCTCGATTTAA GGGCAATC TGTG GATTGCCC CGAGTTGTTCCTTGC TERM 1186 1627621 - 1627610 - g 82 -7.2 -4.60041 | opp_overlap 1627609 1627600 ACTGATCTGGAAAAA GCCG GTAT CGGC ATGATTCAGATTGAT Neut_1555 1625801 - 1628110 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase Neut_1556 1629537 - 1628284 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1187 1629095 - 1629118 + g 70 -11.1 -2.59569 | overlap 1629094 GAAAGGCGGCCCACC TGAGCAAGG ATATAG CCTTGCTCA ATATTGATTTCCGCC Neut_1557 1629625 - 1630014 + | putative endoribonuclease L-PSP TERM 1188 1630557 - 1630547 - g 71 -6.8 -4.15044 | GCGGTTGCGAAGAAA GCAG TTT CTGC GTGAAATTTTGCCGG TERM 1189 1631119 - 1631098 - g 86 -2.8 -5.64274 | overlap 1631099 1631100 GCAGTCAGAAAAAAA GCCTGCGC AGCCAA GAGCTGGC AAAAACGGCAAGTGG TERM 1190 1631461 - 1631479 + G 79 -11.7 -3.25088 | overlap 1631449 1631474 GCATCCGTGAAGCCT GCCTGGC TGGCC GCCAGGC TTACTGGGTTTGCCC Neut_1558 1630047 - 1632104 + | ATP-dependent DNA helicase RecG Neut_1559 1632955 - 1632089 - | hypothetical protein greB 1633040 - 1633588 + | transcription elongation factor GreB TERM 1191 1634857 - 1634836 - g 89 -14.5 -3.54029 | opp_overlap 1634838 GTCGATGAATTACAA CATGCCAGC GACC GCTGGCATG CCTTGCAGGAACAAG TERM 1192 1634838 - 1634855 + G 70 -11.3 -2.52464 | opp_overlap 1634836 CGATGAATTACAACA TGCCAGC GACC GCTGGCA TGCCTTGCAGGAACA Neut_1561 1633780 - 1635084 + | outer membrane efflux protein TERM 1193 1635297 - 1635271 - g 79 -8.6 -4.34402 | overlap 1635272 TTGCCTACATTAAAA CCAGCCCTGCCG TCT CGGCAATGCTGC CGGCCAGTGAGCCAC TERM 1194 1635296 - 1635272 - g 79 -12.1 -3.2032 | overlap 1635271 TGCCTACATTAAAAC CAGCCCTGCCG TCT CGGCAATGCTG CCGGCCAGTGAGCCA TERM 1195 1635690 - 1635672 - g 74 -4.6 -4.77438 | ATGCAGGATGAAAAA TTGGTG TTATATG CACCAA TTGACGGTACGGTGG TERM 1196 1636061 - 1636080 + G 76 -11.4 -3.24329 | opp_overlap 1636051, overlap 1636058 1636077 AGAATCAGTCATTAC CGGTGGGG TTCA TCCCACCG TATTCGTTGAGACTA Neut_1562 1635081 - 1636250 + | RND family efflux transporter MFP subunit TERM 1197 1637549 - 1637533 - g 86 -9.3 -4.58663 | opp_overlap 1637548 ATGATGCTGCAAAAA GGCCTGG GAT CCGGGCC TGATGCTGCCAAATG Neut_1563 1636252 - 1639377 + | heavy metal efflux pump, CzcA family protein Neut_1564 1639420 - 1640091 + | two component transcriptional regulator, winged helix family protein Neut_1565 1640088 - 1641473 + | periplasmic sensor signal transduction histidine kinase TERM 1198 1641523 - 1641487 - f 93 -10.4 -5.0666 | gap 1 GATGTAAAAAAGAAA GCCTGCCATTTTACA GAAAACAA TGTAAAA-GGCAGGC CAAAGTAGAGGAGGA TERM 1199 1641614 - 1641582 - f 73 -5.1 -4.67353 | overlap 1641563 1641584 TTATTCAGGGAAAAA TCTGAAAGAAAAA ATTCATA TTTTTCCTTCAAA TCTATATTCATATCG TERM 1200 1642188 - 1642178 - g 76 -5.4 -4.82901 | TGTCGGTGAGAAAAA CGAT GTT ATCG GCGAGAAAATGCATC TERM 1201 1642460 - 1642481 + G 74 -8.1 -3.97088 | gap 1, overlap 1642475 GCAATGGTTTGAGAT GGA-TGCAGA ATA TCTGCAATCC TTTGCTCTTATCCCA Neut_1566 1641969 - 1642670 + | hypothetical protein TERM 1202 1642688 - 1642674 - g 72 -10 -3.41602 | TCCACTTCATGACAA GCAGGA TCT TCCTGC CTTACCATCGCTGCT TERM 1203 1642936 - 1642950 + G 79 -7.1 -4.60073 | CTGGCACGTATGCTG TCCGC TTGGC GCGGA TTTTATCGTTATCTG TERM 1204 1643367 - 1643343 - g 74 -12.1 -2.79302 | ATTATTTTTATCACA GCGCGGGCG TCGCATC CACCCGCGC ACAATTGCTTACCGT Neut_1567 1642654 - 1643619 + | tyrosine recombinase XerC Neut_1568 1644568 - 1643666 - | prephenate dehydrogenase TERM 1205 1644376 - 1644366 - G 73 -5.4 -4.70583 | overlap 1644367 GCGAGTAATACAAAA TCTG CAC CAGA TAGTGCGGCAGCAAA Neut_1569 1645714 - 1644596 - | histidinol-phosphate aminotransferase TERM 1206 1645566 - 1645597 + g 70 -8 -3.80516 | opp_overlap 1645566, overlap 1645590 TCTCTTGCCAACGGA CTGGTTCCCAATGG ATTC TCGTTGGAAGCCAG TTTAATGACTTCATT Neut_1570 1646794 - 1645736 - | chorismate mutase Neut_1571 1648051 - 1646834 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 1207 1646967 - 1646977 + g 74 -6.8 -4.28713 | AGTGTATAAGCCATT TCCC CAC GGGA TTTATTGATCATATT TERM 1208 1647460 - 1647444 - G 79 -5.1 -4.99947 | TGTAATGAAATAAAA TTGCTGC GGC GCACCAA ATCTTCAATCTGATT Neut_1572 1649150 - 1648044 - | phosphoserine aminotransferase TERM 1209 1648819 - 1648835 + g 100 -7.9 -5.43866 | overlap 1648820 ACAGAGCAGTATTGA CCCGCCT CAG AGGCGGC TTTTTTTGACCATTG TERM 1210 1648820 - 1648834 + g 84 -11.4 -3.85235 | overlap 1648819 CAGAGCAGTATTGAC CCGCCT CAG AGGCGG CTTTTTTTGACCATT Neut_1573 1651714 - 1649168 - | DNA gyrase subunit A TERM 1211 1649636 - 1649623 - G 100 -6.7 -5.31275 | opp_overlap 1649623, overlap 1649626 CTGCATCAGAAAAAA GCATG ACGT CATGC TTGCCTTCGGTAAGC TERM 1212 1651265 - 1651247 - G 75 -10.3 -3.44146 | opp_overlap 1651244 TGCCGGCAGAATCAA TGGCTCC TGTTC GGAGCCA TCATAGTTGGGGCCA TERM 1213 1651796 - 1651812 + r 87 -5.1 -5.4505 | GAATTACTGATGGCT CTGCTCA ATA TAAGCAG TTTTTTGTTCCAGCA Neut_1574 1652365 - 1651784 - | toluene tolerance family protein Neut_1575 1653524 - 1652394 - | glycosyl transferase family protein TERM 1214 1653009 - 1652998 - G 81 -5.8 -5.0432 | AAGAAAAATATAAAA GCTG GCAC CAGC AGGTGTTCGGAGAAA Neut_1576 1654736 - 1653573 - | radical SAM domain-containing protein TERM 1215 1653641 - 1653656 + g 73 -5.4 -4.64048 | overlap 1653643 CAACAGTTACTGACA CGGGAA AGGG TTTCCG TTTATTTGTATCATG TERM 1216 1655608 - 1655576 - g 83 -3.4 -5.47431 | overlap 1655578 TGAAGATATAAAAAA TTTCCGGCAGCTTC ATTCA AAAACTCCCGGACA TCCTGAGTATGGTTA Neut_1577 1655283 - 1657301 + | transketolase TERM 1217 1658212 - 1658202 - g 82 -6.8 -4.76041 | opp_overlap 1658202 1658200 TACACTGATCAAAAA GTGG TTT CCAC TGATTTTCGTGGAGA Neut_1578 1657365 - 1658372 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 1218 1658442 - 1658470 + F 100 -16.2 -4.33621 | opp_overlap 1658439 1658438, overlap 1658469 TACCCTGGAAATTGT GCTGTAACCAGT TCCCT ACTGGTTACAGC TTTGTTGCTTCAATA pgk 1658691 - 1659869 + | phosphoglycerate kinase Neut_1580 1659904 - 1661394 + | pyruvate kinase Neut_1581 1661502 - 1662566 + | fructose-1,6-bisphosphate aldolase TERM 1219 1662591 - 1662639 + F 71 -2.4 -5.08601 | gap 2 GGGCTAATCCCCAAA GTGCCCCACAAATTCCTGGAAAGA TAT TCAAATCGGGGAT--GTGGGGCAC TTTTTATTCACATCA TERM 1220 1663204 - 1663181 - f 70 -9 -3.14636 | gap 1, overlap 1663179 AAGCAAGTTAATACA GTGTTGCTAGT TAA ACT-GCAACAC AATCAAGAGAGAGTG Neut_1582 1663224 - 1664882 + | cytochrome c oxidase, subunit I TERM 1221 1665115 - 1665132 + G 72 -9.9 -3.38812 | overlap 1665113 CGCGGCTGGGGACGG GTCACCA CGCC TGGTGAC TATTATTACGACAAA Neut_1583 1664872 - 1665480 + | cytochrome C oxidase, mono-heme subunit/FixO Neut_1584 1665545 - 1666156 + | cytochrome c, class I TERM 1222 1666609 - 1666624 + G 70 -4.6 -4.66318 | overlap 1666610 ATAACTTGAGTGCCA GGCCAG AACT CTGGCG TTTTGTTCGAGTACT Neut_1585 1666197 - 1666847 + | hypothetical protein TERM 1223 1666946 - 1666929 - f 76 -4.1 -5.16572 | opp_overlap 1666930, overlap 1666930 ATGCAATGGAAAAAA GCATGTG GTGT CACATGT TGGTGCAGTTTCCAC Neut_1586 1666943 - 1667434 + | hypothetical protein Neut_1587 1668490 - 1667537 - | rare lipoprotein A Neut_1588 1669604 - 1668495 - | rod shape-determining protein RodA Neut_1589 1671504 - 1669627 - | peptidoglycan glycosyltransferase TERM 1224 1670169 - 1670179 + g 74 -6.8 -4.43477 | CCGAAATGGTATCCC CTGG CAG CCAG TTTTGATTAAATCGC TERM 1225 1670238 - 1670255 + g 79 -8.5 -4.41348 | opp_overlap 1670224, overlap 1670221 1670219 ATCCAGCAGCTTCTC CTGGAAT ATCT ATTCCAG TTTCTTTACCAAAAC Neut_1590 1672052 - 1671501 - | rod shape-determining protein MreD Neut_1591 1672914 - 1672024 - | rod shape-determining protein MreC TERM 1226 1672750 - 1672739 - GR 78 -5.8 -4.8622 | opp_overlap 1672738 1672739 TCTTGCAAGGAAAAA GGCA AATA TGCC AATTTTTGTAACGGG Neut_1592 1674338 - 1673277 - | cell shape determining protein, MreB/Mrl family protein gatC 1674501 - 1674788 + | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 1227 1675010 - 1674998 - g 83 -3.3 -5.5112 | overlap 1674999 TGGATGAAGAAAAAA GTCTG GAT CAGGC CAGAACCGCTGACGA Neut_1594 1674853 - 1676313 + | glutamyl-tRNA(Gln) amidotransferase, A subunit gatB 1676378 - 1677814 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1228 1677888 - 1677854 - T 100 -3.7 -5.79595 | gap 2, opp_overlap 1677854, overlap 1677847 GCTCAAAACAAAAAA TTCAGGTCCGATAGCTG CTC CAG--ATCGAGCCTGAA TTTCATGCATAAACT TERM 1229 1678483 - 1678458 - T 93 -15.5 -2.80291 | opp_overlap 1678462, overlap 1678462 AACCAGCTGATTAGA CAAACGGGACC CGTG GGCCCCGTTTG TCATCCGACTTATTC TERM 1230 1678479 - 1678462 - T 82 -10.5 -4.08974 | opp_overlap 1678462, overlap 1678458 AGCTGATTAGACAAA CGGGACC CGTG GGCCCCG TTTGTCATCCGACTT TERM 1231 1678462 - 1678479 + T 76 -8.3 -3.96892 | opp_overlap 1678462 1678458 AGCTGATTAGACAAA CGGGACC CGTG GGCCCCG TTTGTCATCCGACTT Neut_1596 1678930 - 1678493 - | heat shock protein Hsp20 Neut_1597 1679300 - 1679082 - | hypothetical protein Neut_1599 1679636 - 1679935 + | hypothetical protein TERM 1232 1680498 - 1680514 + T 70 -2.9 -4.96468 | opp_overlap 1680480, overlap 1680501 AGGCACAGGCCGTAG CCACGAG GCT TTCGTAG TTTTGTTTGAGTTTA Neut_1600 1680777 - 1680550 - | hypothetical protein Neut_1601 1681519 - 1683687 + | (p)ppGpp synthetase I, SpoT/RelA TERM 1233 1684340 - 1684324 - g 76 -5.2 -4.79373 | overlap 1684339 CAAGACAACAGAAAA GCTTTT GAAGA AAAAGC AATCCAATTTGCGAT TERM 1234 1684352 - 1684339 - g 74 -2.4 -5.06414 | overlap 1684324 GCTTTTGAAGAAAAA GCAA TCCAAT TTGC GATTCTTTACGGAAT Neut_1602 1683706 - 1684389 + | hypothetical protein Neut_1603 1685052 - 1684399 - | DSBA oxidoreductase TERM 1235 1684768 - 1684755 - G 70 -2.3 -5.02074 | opp_overlap 1684764, overlap 1684756 CTATTGCGTAAAAAA GCCTG GCTG CAGGT GCCCAGTTATTACGG Neut_1604 1685833 - 1685168 - | sporulation domain-containing protein TERM 1236 1685574 - 1685603 + g 84 -2 -5.67967 | overlap 1685576 1685578 AAGCGTGATCCACTC GTTTCCGCCTGA TTTGTC TGGGGCGGGATC TTTTTTTCTGCTGAT argS 1687617 - 1685857 - | arginyl-tRNA synthetase TERM 1237 1687713 - 1687736 + H 75 -11 -2.83899 | overlap 1687712 TCCGAAAACCTGCCC GGAGAGCCTT GGCA AAGGCTCCCC ATTTGCTCGAACCTT TERM 1238 1688520 - 1688494 - g 84 -2.3 -5.54907 | gap 1 GCTACAAAACAAAAA GAGGCAAACGCT CCAA AAC-TCCGCCTC TTTAACTGAGTAGCC Neut_1606 1687866 - 1688525 + | hypothetical protein Neut_1607 1688663 - 1689550 + | methylenetetrahydrofolate dehydrogenase (NADP(+)) TERM 1239 1689729 - 1689713 - g 93 -9.3 -5.01732 | overlap 1689714 AATTGGTGGAAAAAA CGCGCCG CAC CGGCGCC TACCTGCCCTATAGC TERM 1240 1689728 - 1689714 - g 83 -12.8 -3.60316 | overlap 1689713 ATTGGTGGAAAAAAC GCGCCG CAC CGGCGC CTACCTGCCCTATAG aceE 1689592 - 1692252 + | pyruvate dehydrogenase subunit E1 Neut_1609 1692325 - 1693674 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 1241 1693687 - 1693712 + F 85 -12 -3.3353 | opp_overlap 1693687 1693686 1693690, overlap 1693683 1693690 TGAGTGATGCACAAC CAATCAGGCA ATGCGG TGCCTGATTG TCTATTTATCGGCAA TERM 1242 1693712 - 1693687 - f 79 -12 -2.61912 | opp_overlap 1693683 1693687 1693690, overlap 1693686 1693690 TGAGTGATGCACAAC CAATCAGGCA ATGCGG TGCCTGATTG TCTATTTATCGGCAA TERM 1243 1693690 - 1693709 + F 71 -7.9 -3.80279 | opp_overlap 1693687 1693686 1693690, overlap 1693687 1693683 GTGATGCACAACCAA TCAGGCA ATGCGG TGCCTGA TTGTCTATTTATCGG Neut_1610 1693728 - 1694423 + | nicotinate (nicotinamide) nucleotide adenylyltransferase Neut_1611 1694420 - 1694785 + | iojap-like protein Neut_1612 1694877 - 1695344 + | hypothetical protein TERM 1244 1695628 - 1695663 + G 83 -9.6 -4.24948 | gap 1, opp_overlap 1695621 1695628 ATACCAAAGCAGAAG CTGGCTGGCTACGCCTG AAA CAG-CGGAGCCTGCCCG TTTTGCCTGTACTGG Neut_1613 1695426 - 1696049 + | maf protein TERM 1245 1697174 - 1697163 - g 70 -4.4 -4.65916 | CTGAGTTTAATAAAA CCTT GCAA AAGG ATCGGACTAAAATGA Neut_1614 1696082 - 1697533 + | ribonuclease, Rne/Rng family protein Neut_1615 1697769 - 1698491 + | TonB family protein Neut_1616 1698495 - 1699292 + | MotA/TolQ/ExbB proton channel Neut_1617 1699292 - 1699717 + | biopolymer transport protein ExbD/TolR Neut_1618 1700569 - 1699787 - | RNA methyltransferase TERM 1246 1700138 - 1700117 - G 83 -5.1 -5.21709 | overlap 1700118 GGTCACAGCAAAAAA GGGTACAGT ATCC ACTGCACCA CTGGCAACTTTATGA TERM 1247 1700137 - 1700118 - G 70 -8.6 -3.72302 | overlap 1700117 GTCACAGCAAAAAAG GGTACAGT ATCC ACTGCACC ACTGGCAACTTTATG Neut_1619 1702801 - 1700597 - | ribonuclease R TERM 1248 1704487 - 1704474 - g 74 -2.3 -5.06414 | overlap 1704478 CCCCTCGAACAAAAA CTGAG ATTG CTCGG CGTTCGTGCCAGCAA Neut_1620 1703415 - 1704572 + | DNA-directed DNA polymerase Neut_1621 1704929 - 1706029 + | sigma-54 factor interaction domain-containing protein Neut_1622 1706911 - 1706315 - | amidohydrolase 2 TERM 1249 1706494 - 1706482 - G 70 -9.1 -3.5891 | opp_overlap 1706490, overlap 1706475 1706480 CGTCAGAACCAAACA GCAGC TTG GCTGC TCCAGCTCGTTTGAC Neut_1623 1708458 - 1707163 - | N-acetylmuramoyl-L-alanine amidase Neut_1624 1708911 - 1709759 + | integrase catalytic subunit Neut_1625 1710205 - 1709762 - | hypothetical protein Neut_1626 1710845 - 1710189 - | hypothetical protein TERM 1250 1711528 - 1711518 - H 71 -8.2 -3.72324 | TATGTTTAGTAACAA CCGC ACT GCGG CAGGTATCAGTCAGT Neut_1627 1711689 - 1712312 + | esterase/lipase/thioesterase family protein TERM 1251 1712504 - 1712471 - T 73 -10.3 -3.11182 | gap 1, opp_overlap 1712470 1712471, overlap 1712468 1712469 TCGAACAAATAAGGA GCTTCCCCGG-ATGCC AGA GCCATGCCGGGGAAGA ATTATTTACAGCTCA TERM 1252 1712471 - 1712504 + T 72 -10.3 -2.95204 | gap 1, opp_overlap 1712468 1712471 1712469, overlap 1712470 TCGAACAAATAAGGA GCTTCCCCGG-ATGCC AGA GCCATGCCGGGGAAGA ATTATTTACAGCTCA Neut_1628 1713320 - 1712523 - | carbonate dehydratase Neut_1629 1713592 - 1713350 - | hypothetical protein TERM 1253 1713604 - 1713628 + H 73 -4.4 -4.81814 | opp_overlap 1713613 1713615 GCATTATTTTCCTCC TTTTGCAAAT ATGCA AATTGCAAAA TTTTGTTCTGGTCCT Neut_1630 1714112 - 1715452 + | hypothetical protein Neut_1631 1716379 - 1715543 - | tRNA/rRNA methyltransferase (SpoU) Neut_1632 1718295 - 1716877 - | dihydrolipoamide dehydrogenase Neut_1633 1718527 - 1719510 + | malate dehydrogenase Neut_1634 1720017 - 1719562 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Neut_1635 1721393 - 1720050 - | TPR repeat-containing protein TERM 1254 1721350 - 1721340 - G 74 -6.8 -4.34488 | TACAGGTATAATAAA CAGC AAT GCTG CCATGATAAATATAC Neut_1636 1721905 - 1721390 - | cytochrome C biogenesis protein Neut_1637 1722437 - 1721913 - | periplasmic protein thiol--disulphide oxidoreductase DsbE Neut_1638 1724479 - 1722434 - | cytochrome c-type biogenesis protein CcmF TERM 1255 1722650 - 1722636 - G 70 -4.3 -4.68384 | overlap 1722631 ATCCAGTTAACAAAA GGTTT GTGAT AAACC CGTACTATCCAGGCA TERM 1256 1723287 - 1723276 - G 81 -5.8 -4.91109 | overlap 1723253 GCCCCATCAGAAAAA TGGC TGGT GCCA TTAAAGGCACAAAAA TERM 1257 1724302 - 1724286 - G 74 -2.3 -5.10064 | TTCAATACAGAAAAA TCATTGT TCA AGAATGA ATAGGCGAGACAGCC Neut_1639 1724969 - 1724520 - | cytochrome c-type biogenesis protein CcmE Neut_1640 1725148 - 1724972 - | hypothetical protein Neut_1641 1725888 - 1725145 - | heme exporter protein CcmC TERM 1258 1725604 - 1725583 - G 88 -10.9 -4.15201 | AGCAAGGAAAGCAAA CATAGCACC TGTC GGCGCTATG GCACTGGCCACCATA Neut_1642 1726650 - 1725991 - | heme exporter protein CcmB Neut_1643 1727271 - 1726657 - | cytochrome c biogenesis protein CcmA Neut_1644 1728371 - 1727382 - | tRNA pseudouridine synthase B TERM 1259 1728176 - 1728159 - G 100 -9.9 -4.6971 | CAAAGCTGAAGAAAA CTTGGTG GCTT CACCAAG ACAAATTGGCAGCAA Neut_1645 1728809 - 1728456 - | ribosome-binding factor A infB 1731528 - 1728862 - | translation initiation factor IF-2 TERM 1260 1730960 - 1730994 + g 74 -3.5 -5.05782 | gap 1, overlap 1730963 CCTGACACAGCCGCC GTTTCCGACCCAGGCT CTTG AACCTGGGT-GGATTC TTTTTTCACCTCAGT TERM 1261 1730963 - 1730991 + g 86 -8.2 -4.63089 | gap 1, overlap 1730960 GACACAGCCGCCGTT TCCGACCCAGGCT CTTG AACCTGGGT-GGA TTCTTTTTTCACCTC nusA 1733119 - 1731647 - | transcription elongation factor NusA TERM 1262 1731828 - 1731843 + g 86 -3.2 -5.64304 | AACGCAAGTAATGCT TCAGAC GCAT GTCCGA TTTTTTCTTCTGTTA Neut_1648 1733654 - 1733172 - | hypothetical protein TERM 1263 1733640 - 1733625 - G 100 -6.8 -5.73978 | ACCACAAATAAAAAA TGGGCC AACC AGCCCA CCTTCAAAACACATT Neut_1650 1734587 - 1735024 + | hypothetical protein TERM 1264 1735061 - 1735029 - T 100 -7.1 -5.85425 | gap 1 GAAACAAATAAAAAA CGAAATGCACCTCG GGGTAT CG-GATGCATTCCG CTCACAGCCTCCGTA TERM 1265 1735069 - 1735093 + T 100 -17.3 -2.92255 | overlap 1735063 1735090 GCATTCCGCTCACAG CCTCCGTATAC GGG GTATACGGAGG TGTACTATCTCTTAA Neut_1651 1735424 - 1735098 - | cytochrome c, class I Neut_1652 1735783 - 1735457 - | cytochrome c, class IC:cytochrome c, class I Neut_1653 1737842 - 1735896 - | ABC transporter-related protein TERM 1266 1737221 - 1737244 + g 70 -8.1 -3.73072 | opp_overlap 1737218 1737221 GAGTAATGAATATCA TGCTGCCGG AAAACC CCTGCAGCA TTTCCTCAAGCCATT TERM 1267 1738129 - 1738115 - g 87 -8.5 -4.89393 | CAAACGGTACAAAAA GGCGG GTGTG CCGCC AAGGTTGCCGCCACA TERM 1268 1738657 - 1738643 - g 70 -4.2 -4.65078 | overlap 1738645 ACAGCCGGAATAAAA CGGCAA CAA TTGCAG GAGAAGGACATCATG Neut_1654 1738073 - 1739122 + | selenide, water dikinase Neut_1655 1739115 - 1740281 + | tRNA 2-selenouridine synthase Neut_1656 1742198 - 1740630 - | 4-cresol dehydrogenase (hydroxylating) TERM 1269 1741846 - 1741861 + g 80 -2.6 -5.44119 | AGTTCTGGATCAACA TGAATG ATTT TATTCA TTTTTTTGAGATCAA Neut_1657 1742920 - 1742195 - | hypothetical protein Neut_1658 1743287 - 1742931 - | hypothetical protein Neut_1659 1744588 - 1743551 - | dihydroorotase Neut_1660 1745582 - 1744686 - | hypothetical protein TERM 1270 1745190 - 1745178 - G 77 -10.5 -3.59946 | CCCGGAAGCAGACAA GGCGC ACA GCGCC GCATTGGCACCGGGA TERM 1271 1745641 - 1745653 + H 75 -4.8 -4.81249 | TAATCGCACTATACG GCAG TTCCT CTGC TTTTTCCATTTACAG Neut_1661 1745724 - 1747514 + | ABC transporter-related protein TERM 1272 1747652 - 1747641 - g 81 -5.8 -4.91852 | TCCACGAAAAACAAA GGCA GTGA TGCC GAACAACAGGCCACT Neut_1662 1747620 - 1747970 + | hypothetical protein TERM 1273 1748145 - 1748164 + T 73 -4.9 -4.59773 | overlap 1748147 CATCCCATTGTGTTT GCGGAGC TATAGT GCTCCCC TTTTTCAAGATAGCA Neut_1663 1749564 - 1748350 - | hypothetical protein TERM 1274 1749572 - 1749584 + H 71 -4.1 -4.7497 | overlap 1749564 1749567 TTCTGCATCTGTCTT CCAGA CTA TTTGG TTTTTGATCACTCGG Neut_1664 1750387 - 1750644 + | transport-associated TERM 1275 1752889 - 1752903 + G 73 -2.9 -4.91852 | AAATATGGTACTGCA GAAAA GAGTA TTTTC TTTCTTTTTCATCGC TERM 1276 1755175 - 1755163 - g 73 -6.3 -4.4572 | AATATCGGAAATAAA TTGCT GCC AGCAA TCGAACAACGACTTG TERM 1277 1758101 - 1758115 + G 73 -11.4 -2.88663 | TACGTAATGTATCCG GTCGGC CAC GCCGAC TCTCTGCAACTGGCT TERM 1278 1758778 - 1758798 + G 78 -9.7 -3.87075 | GTGCGTGAGCAATTG CTGCTGTGT GCA GCGCAGCAG TTTGTGGAAGGTGAT TERM 1279 1759482 - 1759492 + G 79 -6.8 -4.7254 | ACGGCACGATCATGC GCTG ATT CAGC TTTTTGATCCGCCGT Neut_1665 1751161 - 1760118 + | glycosyltransferase 36 TERM 1280 1760308 - 1760296 - T 100 -5.5 -5.82388 | opp_overlap 1760296 AAACGGCAAAAAAAA TGGCC AGT AGCCA TTGTTTCAGATTCCA Neut_1666 1760559 - 1760338 - | ISPg7, transposase TERM 1281 1761311 - 1761323 + r 79 -4.9 -5.07486 | opp_overlap 1761311 AACAAATAATCAGAA TTCTT AAA AAGAA TTTTTCTTCCCAATA TERM 1282 1761791 - 1761756 - R 84 -13 -2.57489 | overlap 1761752 GATGAATTGAATTTA CATCTTATTTATTAAT TCAC ATTAACAAATAAGATG TGGCCAGCCAGAAAT TERM 1283 1762429 - 1762412 - R 75 -8.4 -3.72742 | opp_overlap 1762415 1762419 CGACCACCAACATAA CGCGAC AGCGGG GTCGCG CGCCGCGCGGCCAGC TERM 1284 1762415 - 1762450 + r 79 -11.8 -2.54896 | gap 1, opp_overlap 1762412, overlap 1762419 1762431 CCACCAACATAACGC GACAGCG-GGGTCGCGC GCC GCGCGGCCAGCGCTGTG TGGCTTCGGTGCCCC TERM 1285 1762419 - 1762446 + r 78 -11.2 -2.95388 | gap 1, opp_overlap 1762412, overlap 1762415 1762431 CAACATAACGCGACA GCG-GGGTCGCGC GCC GCGCGGCCAGCGC TGTGTGGCTTCGGTG TERM 1286 1762431 - 1762454 + r 73 -10.2 -3.05384 | overlap 1762419 1762415 ACAGCGGGGTCGCGC GCCGCGCGGC CAGC GCTGTGTGGC TTCGGTGCCCCACGG Neut_1668 1764360 - 1762894 - | DEAD/DEAH box helicase domain-containing protein TERM 1287 1763805 - 1763826 + g 74 -2.2 -5.21709 | TCAGACTCTGTCGCT GTGAAGGT AACAAC GCCATCAC TTTTTTGATATCCGG Neut_1669 1765316 - 1764519 - | hypothetical protein TERM 1288 1765348 - 1765333 - R 100 -6.1 -6.04324 | TCAAAAAATAAAAAA CCGTC TTTTCC GACGG TTGAAAATAATGACT Neut_1670 1766262 - 1765555 - | cytochrome c-554 precursor Neut_1671 1767445 - 1766324 - | hypothetical protein TERM 1289 1767389 - 1767354 - G 88 -10.4 -4.23781 | overlap 1767349 1767373 CCCAGCAAAACCAAA CCTCCCGTCACCAG TAAAATCC CCAGTGGCGGGAGG AGTCGGTCAAACCAG TERM 1290 1767422 - 1767401 - G 77 -10.8 -3.54741 | opp_overlap 1767401 GAGGAGTCGGTCAAA CCAGCGCG ACTGTG CGCGCCGG TTTGGTGTCAACGAA TERM 1291 1767401 - 1767422 + g 72 -8.6 -3.83026 | opp_overlap 1767401 GAGGAGTCGGTCAAA CCAGCGCG ACTGTG CGCGCCGG TTTGGTGTCAACGAA Neut_1672 1769154 - 1767442 - | hydroxylamine oxidase TERM 1292 1768755 - 1768743 - G 73 -3.3 -5.00616 | overlap 1768744 CTTTTTTGTAAAAAA GCGGA TCT TCCGG CTTGAGGTTGCGTAT Neut_1673 1769505 - 1769242 - | ribosomal protein S20 Neut_1674 1770088 - 1769810 - | transposase and inactivated derivative Neut_1675 1770549 - 1770112 - | hypothetical protein TERM 1293 1770675 - 1770691 + r 71 -10.1 -2.69799 | opp_overlap 1770643, overlap 1770666 TCGAACGTGCGACCC CCGCCTT CGG AGGGCGG TACTCTATCCACTGA Neut_1676 1771104 - 1770877 - | hypothetical protein Neut_1677 1771667 - 1771281 - | invasion gene expression up-regulator, SirB Neut_1678 1772073 - 1771729 - | hypothetical protein Neut_1679 1773034 - 1772168 - | hypothetical protein Neut_1680 1774161 - 1773055 - | Rieske (2Fe-2S) domain-containing protein TERM 1294 1773633 - 1773670 + g 70 -10.7 -2.91144 | gap 1, opp_overlap 1773624, overlap 1773628 1773625 1773631 TAAAAGTTTTCCAGT TGCACTGG-TAGTGTTCA ATT TGCACACGATCCAGTGCA TACTTTGAAAAATCC Neut_1681 1774531 - 1775916 + | hypothetical protein TERM 1295 1775969 - 1775933 - f 82 -8.9 -4.16016 | opp_overlap 1775932 1775961 1775963, overlap 1775934 TGATTTTCCAAGAAA CTCCGAAAGAATATC TGATCAC GTTATTCTTTCGGAA AGTTGATTCCGGATA TERM 1296 1775968 - 1775934 - f 73 -10.2 -3.09288 | opp_overlap 1775932 1775961 1775963, overlap 1775933 GATTTTCCAAGAAAC TCCGAAAGAATATC TGATCAC GTTATTCTTTCGGA AAGTTGATTCCGGAT TERM 1297 1776023 - 1776034 + G 71 -7.2 -3.97331 | overlap 1776033 GTTGCGCTTGATGTT CCGG TTAA CCGG TTGTTTGACTACCTT TERM 1298 1776221 - 1776235 + G 76 -8.6 -4.15006 | CTGCCCCAGTCGTTA CTCGAA CTA TTCGAG TTTTGCAGTCACTAT Neut_1682 1775993 - 1778194 + | primosomal protein N' Neut_1683 1778709 - 1778263 - | UspA domain-containing protein TERM 1299 1778518 - 1778531 + g 74 -6.7 -4.32669 | overlap 1778522 GGTAAGTATTTTTTC TCCAC AATC GTGGA TTGTTTTCTGCAATT TERM 1300 1778522 - 1778534 + g 73 -6.3 -4.44461 | overlap 1778518 AGTATTTTTTCTCCA CAATC GTG GATTG TTTTCTGCAATTCTT Neut_1684 1780477 - 1778828 - | hypothetical protein TERM 1301 1780098 - 1780067 - G 84 -13.7 -3.34013 | overlap 1780085 CACCGGTGCAAGCAA CGCCGCCAGCACA TACCAC TGCGCCAGCGGCG CAACCTCACGCATCG Neut_1685 1781628 - 1780489 - | peptidase S1 and S6, chymotrypsin/Hap Neut_1686 1781666 - 1782412 + | hypothetical protein TERM 1302 1782454 - 1782443 - g 72 -3.6 -4.81212 | TGCAGCAGAACAAAA GCAG GCAG CCGC TCTCAAATAGCAAAC TERM 1303 1782503 - 1782518 + G 78 -2.6 -5.33985 | gap 1 TTTCATCCTTGTTAT CCAGTTG TTC CAA-TGG TTTATTTTTTTTACG TERM 1304 1782637 - 1782623 - g 95 -5.8 -5.40072 | TCTTCCCTAAAAAAA TGTTTT TAC AAAACA GACACTTTAACCGAA TERM 1305 1782851 - 1782837 - g 83 -5.6 -5.1485 | opp_overlap 1782837 CAAGGAAGATAAAAA GCTGCT TAA AGCTGC TAGTTGGTCAATGCT TERM 1306 1783213 - 1783186 - g 73 -12 -2.62613 | overlap 1783185 1783183 GTCGAGCTCAAAGAC GCGCTGCCCGAT GCAA ATCAGGTAGCGC TACGTGGCCGTCTAC TERM 1307 1783663 - 1783675 + G 83 -9.1 -4.32857 | CCGGAGAGTGTCCCA CTGGG TGC CCCAG TTTATCTTTCCACCA Neut_1687 1782409 - 1783875 + | MltA domain-containing protein Neut_1688 1784628 - 1783915 - | putative thiol:disulphide interchange protein Neut_1689 1785840 - 1784674 - | hypothetical protein TERM 1308 1787450 - 1787440 - g 70 -8.2 -3.75169 | CAGTAGTGGATGAAA CGGG GCT CCCG GCAGAACAGGGAAAA Neut_1690 1786071 - 1788038 + | acetyl-CoA synthetase Neut_1691 1788056 - 1789030 + | beta-lactamase domain-containing protein Neut_1692 1790414 - 1789134 - | amidohydrolase Neut_1693 1790693 - 1790863 + | hypothetical protein TERM 1309 1791146 - 1791127 - f 74 -10.8 -2.80464 | overlap 1791126 1791138 TCATCAACTGGAAAG GTCAGTCA GAAT TGACTGAC TCAAACTACCGAGTG TERM 1310 1791895 - 1791908 + G 76 -4.5 -5.01676 | TCAAGTATTTAATGT GTGGT TTTG GCCAC TTATTTTTTTTGGTT Neut_1694 1791254 - 1792264 + | fatty acid desaturase Neut_1695 1793529 - 1793191 - | hypothetical protein Neut_1696 1793807 - 1793529 - | transposase for IS1106A3 TERM 1311 1795427 - 1795454 + G 84 -4.2 -5.24129 | gap 1 TGGTGGCCAGTGCAG CCATGGCAGGAGT ACC ACTTCT-CAATGG TTTTTTATCGAAGGA TERM 1312 1796377 - 1796393 + G 76 -6.5 -4.46212 | overlap 1796378 ACACTGATTGCGCGG ACACGCA GAT TGCGTGA TTTTGTACTCGCCGC TERM 1313 1796378 - 1796392 + G 70 -10 -3.27406 | overlap 1796377 CACTGATTGCGCGGA CACGCA GAT TGCGTG ATTTTGTACTCGCCG TERM 1314 1796461 - 1796450 - g 71 -5.8 -4.30995 | TTGCCTATAAAATAA CGAC CAAC GTCG AACTGCCGGAAACCA TERM 1315 1796924 - 1796944 + G 70 -9.7 -3.21695 | ATCGTTTGCACATCC TGCCAATCC GCT GGATTGGCC TTGGCTTGCTGCTGG Neut_1697 1794283 - 1797201 + | putative monovalent cation/H+ antiporter subunit A TERM 1316 1797378 - 1797401 + G 71 -10.2 -3.09834 | opp_overlap 1797376, overlap 1797375 CCCGTTACACAGACC GGTGTCCGGG TTGA TCCGGCCACC TTCGCTGATCCAGTG Neut_1698 1797201 - 1797545 + | putative monovalent cation/H+ antiporter subunit C Neut_1699 1797542 - 1799188 + | putative monovalent cation/H+ antiporter subunit D Neut_1700 1799185 - 1799670 + | putative monovalent cation/H+ antiporter subunit E Neut_1701 1799667 - 1799948 + | putative monovalent cation/H+ antiporter subunit F Neut_1702 1799945 - 1800370 + | putative monovalent cation/H+ antiporter subunit G Neut_1703 1803032 - 1800528 - | hypothetical protein TERM 1317 1802231 - 1802194 - G 74 -11.3 -3.08327 | overlap 1802185 ATGAAACGGCGAATA GCCAGGGCAATAGCAGC TGCT GCTACTACCACGCTGGC CAGGGCTGCCAAATT Neut_1704 1803872 - 1803156 - | ABC transporter-related protein Neut_1705 1803955 - 1804566 + | lipolytic enzyme, G-D-S-L family protein Neut_1706 1805670 - 1804606 - | pseudouridine synthase, RluA family protein TERM 1318 1804839 - 1804871 + g 79 -9.1 -4.27584 | GAAAACCGAGATGCG CCAGATGCACCCG AATCTGG TGGGTGCGTCCGG TTTTAAGTTCGGCAT TERM 1319 1805580 - 1805594 + g 70 -2.8 -4.78848 | opp_overlap 1805584 CCGCATGTTCCGATA TAATGC CCG GCATAA TTTTCTCTTTACCGG TERM 1320 1806255 - 1806275 + G 100 -9.7 -5.07567 | overlap 1806256 1806258 AGCGGCTTTTGTTGA TTATGGCGC CGG GCGCCATGG TTTTTTACCCTATAA TERM 1321 1806256 - 1806274 + G 79 -11 -3.63817 | overlap 1806255 1806258 GCGGCTTTTGTTGAT TATGGCGC CGG GCGCCATG GTTTTTTACCCTATA TERM 1322 1806258 - 1806272 + G 77 -11.4 -3.38726 | overlap 1806256 1806255 GGCTTTTGTTGATTA TGGCGC CGG GCGCCA TGGTTTTTTACCCTA TERM 1323 1806429 - 1806412 - g 71 -5.5 -4.43877 | opp_overlap 1806412 GAACGCGGAAATAAA GGTGCTG CGCT CACCACC TATATCTCACTGGCT Neut_1707 1806079 - 1808628 + | ribonuclease, Rne/Rng family protein TERM 1324 1808673 - 1808711 + T 80 -11 -3.29144 | TAAGTGTGTCTATGA TGACGAACGCGCCGACTG TAA TAGTTAGCGTGTCCGTCA TTGTGCGGCCCATAA Neut_1708 1809677 - 1808760 - | tyrosine recombinase XerD Neut_1709 1810644 - 1809799 - | cytochrome c assembly protein TERM 1325 1811295 - 1811277 - g 76 -6.6 -4.56597 | overlap 1811278 TTTTTCCGGTAAAAA CCGGCCAG CAA CCAGCCGA AATCAGTACTGCTGC Neut_1710 1810787 - 1812136 + | signal recognition particle protein Neut_1711 1812452 - 1812949 + | CMP/dCMP deaminase, zinc-binding Neut_1712 1813979 - 1812969 - | YVTN beta-propeller repeat-containing protein TERM 1326 1814073 - 1814049 - R 80 -10.7 -3.38118 | opp_overlap 1814046 1814049 1814051 ATAATGTAGTCACAA GATATCTGCCC AGA GGGCGGACATC TAATTTGTACGGCGG TERM 1327 1814049 - 1814073 + r 76 -10.7 -3.00946 | opp_overlap 1814049, overlap 1814046 1814051 ATAATGTAGTCACAA GATATCTGCCC AGA GGGCGGACATC TAATTTGTACGGCGG TERM 1328 1814120 - 1814132 + r 85 -7.7 -4.62069 | ATTTTGGGTGTGTCT GTAGC AAC GCTAC TTTTTGAGATGAAGG TERM 1329 1814794 - 1814832 + r 89 -12.1 -3.62275 | opp_overlap 1814803, overlap 1814796 1814803 ACGATGGGCTGGCGT CATATGAAATCCTTTTA AAAAA TAAAAGGATTTCATATC TTTAGCCTCATGACT TERM 1330 1814796 - 1814830 + r 100 -14.7 -3.39018 | opp_overlap 1814803, overlap 1814794 1814803 GATGGGCTGGCGTCA TATGAAATCCTTTTA AAAAA TAAAAGGATTTCATA TCTTTAGCCTCATGA TERM 1331 1815122 - 1815096 - R 100 -18.8 -4.62336 | opp_overlap 1815096 1815100, overlap 1815100 ATTCCACTCTAAAAA CAAAGCCCCGGC TTG ACCGGGGCTTTG TTTAGCTAAAGTAGC TERM 1332 1815096 - 1815122 + r 100 -18.1 -3.65902 | opp_overlap 1815096 1815100, overlap 1815100 ATTCCACTCTAAAAA CAAAGCCCCGG CTTGA CCGGGGCTTTG TTTAGCTAAAGTAGC TERM 1333 1815100 - 1815118 + r 100 -13.1 -4.46112 | opp_overlap 1815100 1815096, overlap 1815096 CACTCTAAAAACAAA GCCCCGG CTTGA CCGGGGC TTTGTTTAGCTAAAG TERM 1334 1815118 - 1815100 - R 100 -13.8 -4.87389 | opp_overlap 1815096 1815100, overlap 1815096 CACTCTAAAAACAAA GCCCCGGC TTG ACCGGGGC TTTGTTTAGCTAAAG Neut_1715 1815815 - 1815144 - | hypothetical protein TERM 1335 1815435 - 1815418 - G 76 -7.1 -4.58773 | overlap 1815434 CCCAGGAAACTAAAA TCTTTTC GTGT GAAAAGA GCATAGGCAGATAAT TERM 1336 1815680 - 1815653 - G 71 -7.2 -4.0942 | opp_overlap 1815658, overlap 1815658 CACCTATCACAGAAA TTAAATATGTCA TCGG TGGCATATTTAA GAACATTGAAAGCCC Neut_1716 1816133 - 1815969 - | hypothetical protein TERM 1337 1816029 - 1816017 - G 74 -6.9 -4.4078 | CCTGGTCAAGCAAAA CCGGA CAA CCCGG TTAAGCAGAGCCTGT Neut_1717 1816833 - 1816156 - | transposase, mutator type Neut_1718 1817219 - 1817025 - | NAD-dependent aldehyde dehydrogenases-like Neut_1719 1817234 - 1817527 + | transposase IS3/IS911 family protein TERM 1338 1817585 - 1817532 - f 80 -7.3 -4.4767 | gap 1, overlap 1817542 1817543 TCAGCCAGTAGAAAA CCGCAAGCAATGGGTCAGCGCCATCG AAC CACTGGCGCTGACCCGGCAAT-GCGA ACTGGCGGGAGTTAA TERM 1339 1817576 - 1817542 - f 100 -16.4 -3.40141 | overlap 1817532 1817543 GAAAACCGCAAGCAA TGGGTCAGCGCCATCG AAC CACTGGCGCTGACCCG GCAATGCGAACTGGC TERM 1340 1817575 - 1817543 - f 100 -19.9 -2.63361 | overlap 1817542 1817532 AAAACCGCAAGCAAT GGGTCAGCGCCATCG AAC CACTGGCGCTGACCC GGCAATGCGAACTGG Neut_1720 1817626 - 1818228 + | transposase TERM 1341 1818440 - 1818430 - g 84 -4.6 -5.36181 | overlap 1818438 AAACAAAAAAAGAAA CCGA AAA CCGG GGCAGCGCCGTTCCG Neut_1721 1818219 - 1818503 + | hypothetical protein TERM 1342 1818599 - 1818585 - g 76 -3.4 -5.07567 | overlap 1818570 1818586 GCAGATCGGAAAAAA CCTGCC CAA GGCCGA CGAGGAGATTGATCT Neut_1722 1818562 - 1819749 + | N-isopropylammelide isopropylaminohydrolase TERM 1343 1820590 - 1820574 - f 76 -2.9 -5.22039 | opp_overlap 1820578, overlap 1820577 GGTAAACTCAAAAAA CTACGAA AGC CTCGTGG CTATGGCCTGTGCCT TERM 1344 1821373 - 1821385 + G 70 -4.7 -4.64861 | overlap 1821374 ACCTTCATGTCCATG GGGCG AAT CGCCG TTTATTTTGAAGCAG TERM 1345 1822678 - 1822666 - g 71 -6.3 -4.3739 | opp_overlap 1822669 GACCTGGTGACAAAA CTTCA GTC TGAAG GTCGGGTTGTTGCTA Neut_1724 1820656 - 1823040 + | heavy metal translocating P-type ATPase Neut_1725 1823515 - 1823787 + | hypothetical protein TERM 1346 1824925 - 1824909 - f 78 -10.9 -3.20207 | opp_overlap 1824909, overlap 1824901 AATATTAGTCACTAA TGCGACA ATT TGTCGCA TTCTAAATTAACGGA TERM 1347 1824909 - 1824925 + F 80 -10.9 -3.41878 | opp_overlap 1824901 1824909 AATATTAGTCACTAA TGCGACA ATT TGTCGCA TTCTAAATTAACGGA TERM 1348 1824985 - 1824965 - f 71 -8.3 -3.50715 | opp_overlap 1824969 1824972, overlap 1824969 1824972 ATAATCGGTATATAA CAAACACTG GTG CTGTGTTTG GGCACCATTGTAATT TERM 1349 1825336 - 1825325 - g 71 -5.8 -4.3739 | CACGCCTGGACAAAA CTGG TCAG CCAG GTGAACTAGGATTCG Neut_1727 1825027 - 1826271 + | PepSY-associated TM helix domain-containing protein Neut_1728 1826459 - 1826692 + | hypothetical protein Neut_1729 1826683 - 1826823 + | hypothetical protein Neut_1730 1826850 - 1827272 + | Outer membrane protein-like Neut_1731 1827325 - 1827438 + | outer membrane efflux protein Neut_1732 1828127 - 1830139 + | TonB-dependent siderophore receptor Neut_1733 1830311 - 1830988 + | methyltransferase type 11 Neut_1734 1831074 - 1833017 + | pyridoxal-5'-phosphate-dependent enzyme, beta subunit TERM 1350 1833358 - 1833393 + G 78 -9.8 -3.84394 | gap 1, opp_overlap 1833356, overlap 1833372 1833385 1833388 GCCATCTACCAACGT CATGGCCTGGA-CATGC TAA GCATGCTCGAGGGCATG TTTGCCTTCTGTCTG TERM 1351 1834239 - 1834296 + G 89 -14.2 -3.51708 | gap 1, overlap 1834240 TTTCGATTATTTCAA TGCGGTGGGGGATATCGACCTCGGGCA ACTGA TGCTTGAGGTCGATG-CTCGCGCCGCC TTCATTTCCGCCGTG TERM 1352 1834240 - 1834295 + G 100 -17.7 -2.70704 | gap 1, overlap 1834239 TTCGATTATTTCAAT GCGGTGGGGGATATCGACCTCGGGCA ACTGA TGCTTGAGGTCGATG-CTCGCGCCGC CTTCATTTCCGCCGT Neut_1735 1833019 - 1834839 + | asparagine synthase (glutamine-hydrolyzing) Neut_1736 1835009 - 1836505 + | major facilitator transporter Neut_1739 1837979 - 1838173 + | hypothetical protein Neut_1740 1839385 - 1838177 - | PepSY-associated TM helix domain-containing protein TERM 1353 1838573 - 1838562 - G 76 -5.8 -4.62336 | ACCGCATCTGAAAAA CCCA ATAC TGGG TCAACACCTGATTGC Neut_1741 1841520 - 1839391 - | TonB-dependent siderophore receptor Neut_1742 1842811 - 1841609 - | diaminopimelate decarboxylase TERM 1354 1842077 - 1842066 - G 70 -4.4 -4.63184 | overlap 1842067 1842069 AAGCCATGCGAAAAA TGAC ACCA GTCA AACTGCTGATCGATG Neut_1743 1844622 - 1842808 - | IucA/IucC family protein TERM 1355 1843696 - 1843677 - G 82 -10.8 -3.89346 | opp_overlap 1843677 TCTCCAGCTCATAAA CTGCATTC TTGC GAATGCAG TTGGTCAATCTGACG TERM 1356 1843677 - 1843696 + g 73 -10.8 -3.20382 | opp_overlap 1843677 TCTCCAGCTCATAAA CTGCATTC TTGC GAATGCAG TTGGTCAATCTGACG Neut_1744 1845804 - 1844632 - | major facilitator transporter TERM 1357 1845550 - 1845514 - G 100 -13.1 -4.83615 | opp_overlap 1845525 CAGTCCGCACAAAAA CATGGCAGGACTATCAG CCA CTGACATTCCTGACATG ATGACTGCCAATGCG Neut_1745 1847658 - 1845847 - | IucA/IucC family protein TERM 1358 1846122 - 1846105 - G 82 -3.5 -5.29782 | gap 1 CAGATGGACAAAAAA TATC-GCA TCA TGCAGATA CCAAACCAACTCCTG TERM 1359 1848327 - 1848342 + G 74 -2.5 -5.08601 | TTTGTAGCCATTGAC CGGAC ATCAAA GTTCG TTTTTGTTCAACTCC Neut_1746 1847862 - 1848824 + | integrase catalytic subunit TERM 1360 1848874 - 1848890 + T 76 -2.9 -5.22039 | opp_overlap 1848871 1848868, overlap 1848877 AGGCACAAGCCATAG CCACGAG GCT TTCGTAG TTTTTTGAGTTTACC Neut_1747 1849178 - 1848984 - | hypothetical protein Neut_1748 1849423 - 1849256 - | transposase and inactivated derivatives Neut_1749 1849849 - 1851081 + | hypothetical protein TERM 1361 1851914 - 1851886 - T 76 -10.2 -3.32844 | opp_overlap 1851889, overlap 1851887 1851889 1851901 CTTGGCATTCGAGAA GCAGGTGCCAGG GAAGT CCAGGCACCTGT AATGATTCAGACACC TERM 1362 1851913 - 1851887 - T 86 -13.7 -2.59564 | opp_overlap 1851889, overlap 1851886 1851889 1851901 TTGGCATTCGAGAAG CAGGTGCCAGG GAAGT CCAGGCACCTG TAATGATTCAGACAC TERM 1363 1851889 - 1851911 + T 78 -11.2 -2.86164 | opp_overlap 1851887 1851886 1851889 1851901 GGCATTCGAGAAGCA GGTGCCAGGG AAG TCCAGGCACC TGTAATGATTCAGAC TERM 1364 1851911 - 1851889 - T 71 -10.5 -2.83822 | opp_overlap 1851889, overlap 1851887 1851886 1851901 GGCATTCGAGAAGCA GGTGCCAGG GAAGT CCAGGCACC TGTAATGATTCAGAC Neut_1751 1852553 - 1852149 - | hypothetical protein TERM 1365 1852855 - 1852892 + G 80 -12.1 -3.35597 | gap 1, opp_overlap 1852854, overlap 1852853 GCCCGCAAAGCCAAG GCTGTTGTCGTAGCATGT AAT ACG-GCAACGACAGCAGC TATTTCCAGGCTCAG Neut_1752 1852636 - 1853442 + | glutamate racemase TERM 1366 1853433 - 1853417 - f 71 -5.1 -4.56597 | opp_overlap 1853417 TGCTGTGGGGAAAAA GCGGTAA ATG TTATCGC TGGCTTTGATGTTAG Neut_1753 1853546 - 1854502 + | UspA domain-containing protein Neut_1754 1855887 - 1854538 - | DNA repair protein RadA TERM 1367 1854741 - 1854754 + g 71 -5.2 -4.58395 | ACACAACAGTTTTCT CCGG CAAGAT CCGG TTTTTCAGAGATGAA TERM 1368 1855708 - 1855688 - G 76 -7.5 -4.37092 | AGCCCGGTCAGAAAA CGAGGCATA TCC TCCGCCTCG ACCTCACTCAGACTC TERM 1369 1855778 - 1855757 - G 82 -10.9 -3.91798 | GAATCCGGAATGAAA TGCGGAAGA TTTT TCTCCCGCA CAGTTTCAGTCAACG TERM 1370 1856284 - 1856271 - H 71 -2.3 -5.09173 | opp_overlap 1856272, overlap 1856272 TAACATTTCAAAAAA CGGGT AGAA AACCG GATATATTTTTTACC Neut_1755 1856326 - 1857507 + | phage integrase family protein TERM 1371 1857774 - 1857787 + T 80 -6.7 -4.77896 | GGCAATATTGTTTTC TGCTC TCTA GAGCA TTTTTGGCTTACTTG Neut_1756 1858272 - 1857796 - | ISRm2011-2 transposase protein TERM 1372 1858270 - 1858226 - G 74 -11.4 -3.05384 | opp_overlap 1858237 1858238 1858251, overlap 1858230 CCGTGGGGTACTGAA GCCAC-ACAGCGCTGGCCGCGC GGC GCGCGACCC-CGCTGTCGCGTC ATGTTGGTGGTCGTT TERM 1373 1858265 - 1858230 - G 73 -11.8 -2.54896 | gap 1, opp_overlap 1858237 1858238 1858251, overlap 1858226 GGGGTACTGAAGCCA CACAGCGCTGGCCGCGC GGC GCGCGACCC-CGCTGTC GCGTCATGTTGGTGG Neut_1757 1858783 - 1858346 - | hypothetical protein Neut_1758 1858846 - 1859814 + | hypothetical protein Neut_1759 1860416 - 1860676 + | hypothetical protein TERM 1374 1860813 - 1860800 - T 71 -2.3 -5.07567 | TGACATTTCAAAAAA CGGGT AGAA AACCG GGTGTTTTAGAGATC Neut_1760 1862271 - 1860886 - | L-serine dehydratase 1 TERM 1375 1861030 - 1861007 - G 90 -9.6 -4.55287 | gap 1, opp_overlap 1861011 1861012 TCGAGTGATATAAAA TGCTCGCC-CG TAC CGCGGCAAGCA AGTGCAGCAGCGGTA TERM 1376 1861011 - 1861051 + g 70 -9.6 -3.33696 | gap 1, opp_overlap 1861007, overlap 1861012 GTGATATAAAATGCT CGCCCGTACCGCGGCAAGC AAGT GCA-GCAGCGGTATGGGCC TTGATTGCGCCAAAA TERM 1377 1861012 - 1861050 + g 76 -13.1 -2.60075 | gap 1, opp_overlap 1861007, overlap 1861011 TGATATAAAATGCTC GCCCGTACCGCGGCAAGC AAGT GCA-GCAGCGGTATGGGC CTTGATTGCGCCAAA TERM 1378 1861388 - 1861368 - G 86 -11.1 -4.06993 | opp_overlap 1861383, overlap 1861381 GCAGATAGTAAATAA CTGCCGGAA TAA CCCCGGCAG CGCCATTGGTAGGCG Neut_1761 1862720 - 1863508 + | peptidase S1 and S6, chymotrypsin/Hap Neut_1762 1863729 - 1865000 + | sugar transferase TERM 1379 1865071 - 1865084 + G 100 -4.5 -6.01725 | gap 1, opp_overlap 1865067, overlap 1865066 ACCCTAAGTTACGCT GCG-GC AGC GCTCGC TTTTTTCTTTTTATT TERM 1380 1865639 - 1865624 - g 73 -6 -4.5448 | TATTCAGAAAAATAA GCCCTG ATAT CTGGGC TGCTCGGGGGTGGGT Neut_1763 1865050 - 1867131 + | periplasmic sensor signal transduction histidine kinase TERM 1381 1867336 - 1867352 + G 80 -3 -5.25803 | gap 1, overlap 1867339 GAATCTACTTCCTGC TGCTGGC AATC GCCA-CA TTTTTTGTGGCCGTT Neut_1764 1867215 - 1869077 + | ABC transporter-related protein Neut_1765 1872207 - 1869112 - | heavy metal efflux pump, CzcA family protein Neut_1766 1873373 - 1872210 - | RND family efflux transporter MFP subunit TERM 1382 1872807 - 1872788 - G 70 -8.6 -3.73302 | gap 1, opp_overlap 1872788 1872786, overlap 1872776 1872781 CAACAGATGGAAGAA TCTG-CCCG TGC CGGGTCAGA TCTTGTATTGCCTGA Neut_1767 1874636 - 1873383 - | outer membrane efflux protein Neut_1768 1875639 - 1874980 - | hypothetical protein TERM 1383 1875285 - 1875267 - G 76 -4.4 -5.0538 | opp_overlap 1875267 1875273, overlap 1875268 CCCGACCGGAAAAAA GCTGAGCC TGC GGCTCCGG TGGGTTAATAGAAAA TERM 1384 1875602 - 1875585 - G 72 -4.1 -4.79174 | ACGGAATCAATAAAA CGGCT GCAATCAG AGCCG GCAGAACCACACTAA Neut_1769 1875753 - 1876472 + | glycerophosphoryl diester phosphodiesterase TERM 1385 1876606 - 1876593 - g 87 -8.1 -4.82901 | CTGGTGCTAGAAAAA GCTGC TTTA GCAGC GGGCACTTCGAGCCG TERM 1386 1877457 - 1877467 + G 74 -6.8 -4.3534 | overlap 1877450 GTACTACCGGAGTCT GGGA GCC TCCC TTTTAATCGTTCACG Neut_1770 1876482 - 1877657 + | FAD dependent oxidoreductase Neut_1771 1878019 - 1877687 - | hypothetical protein TERM 1387 1877720 - 1877730 + g 74 -2.4 -5.08015 | CTCGGTTTTTTTTGT ACGC CGG GCGA TTTCTTTTTTGACTT Neut_1772 1878513 - 1878112 - | hypothetical protein TERM 1388 1878408 - 1878426 + g 71 -10.3 -3.1247 | opp_overlap 1878394 TCTGCTGTTCCTGTT GCTGCTG CGCAA CAGCAGC TTCCATCTCAAGAAT Neut_1773 1880014 - 1878554 - | dihydrolipoamide dehydrogenase TERM 1389 1880048 - 1880034 - R 70 -2.8 -4.92314 | ATTAAGTGACAAAAA TTGCTC GTT GAGAAA TCCGGTCTGAATTAC Neut_1774 1881134 - 1880088 - | beta-hexosaminidase TERM 1390 1880737 - 1880719 - G 74 -3.8 -4.91109 | GGCTCACGATAAAAA GCACGATC ACC AATCACGC TACTCTGCTCGCAAT Neut_1775 1881514 - 1881137 - | phosphopantethiene-protein transferase Neut_1776 1882236 - 1881511 - | pyridoxal phosphate biosynthetic protein PdxJ era 1883244 - 1882354 - | GTP-binding protein Era Neut_1778 1884059 - 1883322 - | ribonuclease III Neut_1779 1884439 - 1884056 - | putative transmembrane protein Neut_1780 1885278 - 1884475 - | signal peptidase I TERM 1391 1884685 - 1884668 - G 70 -8.5 -3.68359 | TGGTCAAAAGTACAA TTTTCCC GGTT GGGAAAA TGATGGACAGCGGAT Neut_1781 1887146 - 1885350 - | GTP-binding protein LepA Neut_1782 1887705 - 1887448 - | glutaredoxin 2 Neut_1783 1889170 - 1887698 - | protease Do TERM 1392 1888203 - 1888213 + g 70 -2.4 -4.91109 | ATGCCAGCTTTGTCA GCCG GCC CGCC TTTTTCTACTGAAAC TERM 1393 1888831 - 1888821 - G 70 -3.2 -4.79352 | TTACTGATAATAAAA CCTG AAC CAAG TGAACGAGATTCATA Neut_1784 1889922 - 1889347 - | sigma-E factor negative regulatory protein RseA TERM 1394 1889537 - 1889517 - G 100 -15.5 -3.66908 | opp_overlap 1889535, overlap 1889513 1889524 CGGGCTGAAAAGTAA CCAACGAGC GCT GCTCGTTGG CAGGCGTAGCCTTGT TERM 1395 1889535 - 1889554 + g 76 -5 -4.7878 | gap 1, opp_overlap 1889517 1889513 1889524 ACGAGCGCTGCTCGT TGGC-AGGC GTA GCCTTGTCA TTTATTTTCTCAGTC Neut_1785 1890538 - 1889936 - | RNA polymerase sigma factor RpoE Neut_1786 1891587 - 1890736 - | CBS domain-containing protein Neut_1787 1892066 - 1891641 - | hypothetical protein Neut_1788 1893105 - 1892095 - | PhoH family protein TERM 1396 1892881 - 1892892 + g 76 -3 -5.1101 | GAGATGATTATCCGA TTCT TCAT AGAA TTTTTTCAATGCTCG Neut_1789 1894498 - 1893167 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 1397 1894032 - 1894013 - G 70 -2.8 -4.80656 | overlap 1894017 AGGAACAACACAAAA GCTACAGT ATTT ACTGCATC CTTCCATAATTGATA TERM 1398 1894445 - 1894426 - G 71 -5.8 -4.30995 | gap 1, opp_overlap 1894427 1894442, overlap 1894423 1894428 TTTCTGATAAAAGAA TATCAGCCA TTT TGGCTGA-A TCGTATTCATTCATC TERM 1399 1894444 - 1894428 - G 80 -10.9 -3.75581 | opp_overlap 1894427 1894442, overlap 1894426 1894423 TCTGATAAAAGAATA TCAGCCA TTT TGGCTGA ATCGTATTCATTCAT TERM 1400 1894546 - 1894529 - R 79 -7.7 -4.40173 | opp_overlap 1894529 CAACCTAAAAAAACA CTCGCTG CAAG CAACGAG ATATTAATTACTGTG Neut_1790 1895495 - 1894791 - | NapC/NirT cytochrome c domain-containing protein Neut_1791 1896205 - 1895498 - | cytochrome c-554 precursor Neut_1792 1897388 - 1896267 - | hypothetical protein TERM 1401 1897332 - 1897297 - G 88 -10.4 -4.23781 | overlap 1897292 1897316 CCCAGCAAAACCAAA CCTCCCGTCACCAG TAAAATCC CCAGTGGCGGGAGG AGTCGGTCAAACCAG TERM 1402 1897344 - 1897365 + g 72 -8.6 -3.83026 | opp_overlap 1897344 GAGGAGTCGGTCAAA CCAGCGCG ACTGTG CGCGCCGG TTTGGTGTCAACGAA TERM 1403 1897365 - 1897344 - G 77 -10.8 -3.54741 | opp_overlap 1897344 GAGGAGTCGGTCAAA CCAGCGCG ACTGTG CGCGCCGG TTTGGTGTCAACGAA Neut_1793 1899097 - 1897385 - | hydroxylamine oxidase TERM 1404 1898698 - 1898686 - G 73 -3.3 -5.00616 | overlap 1898687 CTTTTTTGTAAAAAA GCGGA TCT TCCGG CTTGAGGTTGCGTAT Neut_1794 1903531 - 1899317 - | DNA-directed RNA polymerase subunit beta' TERM 1405 1900018 - 1900002 - G 90 -12.3 -4.08216 | overlap 1900006 GTATCTTTCCCAAAA GCTACCG TGC CGGTAGC TTCAGCAAGGAAACC TERM 1406 1902828 - 1902844 + g 79 -9.4 -4.1552 | GTCAATATCATCCAC TCCGGC TTCAT GCCGGA TTTATTAAACGCCTC TERM 1407 1902874 - 1902854 - G 77 -9.7 -3.76224 | opp_overlap 1902857 GCCGGATTTATTAAA CGCCTCAAG CAC CTTGAGTCG CTTGGCAGCCTTCTT rpoB 1907767 - 1903688 - | DNA-directed RNA polymerase subunit beta TERM 1408 1904860 - 1904872 + g 81 -6.3 -5.00616 | CAACAATACGCATTT GATCT GCA AGATC TTTTTTAAAGCGCCC TERM 1409 1907604 - 1907590 - G 86 -8.6 -4.62069 | overlap 1907601 TTTCTATTGGAAAAA CAGCAT TAA ATGCTG CCTGCAGCCCCTGAT TERM 1410 1908083 - 1908112 + r 77 -11.6 -2.57795 | gap 1, opp_overlap 1908083, overlap 1908079 GACATACGAGATAAA GGCTGAC-GATAC AATCC GTATCTGTCAGCC TGAATTACTAATACA TERM 1411 1908112 - 1908083 - R 100 -12.3 -4.12475 | gap 1, opp_overlap 1908083 1908079 GACATACGAGATAAA GGCTGAC-GATACA ATC CGTATCTGTCAGCC TGAATTACTAATACA Neut_1796 1908498 - 1908133 - | ribosomal protein L7/L12 TERM 1412 1908381 - 1908356 - G 73 -11.2 -3.01712 | gap 1 GTTTGTTCTTCAACA GCTGCTGCAGC AGCAG GC-GCAGCAGC CACAGCAACTGGTGC rplJ 1909099 - 1908584 - | 50S ribosomal protein L10 TERM 1413 1908822 - 1908849 + g 74 -11.4 -3.05596 | opp_overlap 1908821 1908820 AATTCATGAAGAACT TTTGCAGTGATC ACAG GATCACTGCCAA TTCCGTAAGCAAGTG rplA 1910161 - 1909466 - | 50S ribosomal protein L1 rplK 1910594 - 1910163 - | 50S ribosomal protein L11 nusG 1911244 - 1910711 - | transcription antitermination protein NusG secE 1911607 - 1911263 - | preprotein translocase subunit SecE TERM 1414 1911835 - 1911823 - R 89 -2.7 -5.63517 | CTTCCAAACAAAAAA TTGCA GAC TACAA ATTTATCAGCTTATT Neut_1802 1913041 - 1911851 - | elongation factor Tu TERM 1415 1913138 - 1913154 + r 74 -10.9 -2.62983 | opp_overlap 1913128 1913150 TTGAACTGGCGACCT CTCCCTT ACC AAGGGAG TGCTCTACCACTGAG Neut_1803 1915751 - 1913589 - | type IV pilus secretin PilQ Neut_1804 1916275 - 1915748 - | pilus assembly protein, PilQ Neut_1805 1916922 - 1916272 - | pilus assembly protein, PilO TERM 1416 1916710 - 1916697 - G 70 -3.1 -4.80882 | ATTGCACACGAAAAA GATCA AGAT TGACC GCACTATTTTTTTTG Neut_1806 1917530 - 1916919 - | fimbrial assembly family protein Neut_1807 1918651 - 1917527 - | type IV pilus assembly protein PilM TERM 1417 1917606 - 1917575 - G 86 -14.4 -3.18264 | GCTGGCAGTCAGCAA CACCGCGGCATCCA TCTT CAGCTGCCGCGGTG CAATCCGGCCGGATA Neut_1808 1918810 - 1921122 + | penicillin-binding protein, 1A family protein Neut_1809 1922330 - 1921410 - | histone deacetylase superfamily protein Neut_1810 1922688 - 1922467 - | prevent-host-death protein Neut_1811 1923164 - 1922877 - | putative transcriptional regulator Neut_1812 1923531 - 1923124 - | hypothetical protein TERM 1418 1923416 - 1923442 + gH 87 -7.2 -5.02074 | opp_overlap 1923410 1923411 GGAAGAATAGTCGTC GGAAGCGACGGT AAT ACTGGCTCTTCC TTTTTTAGGAGATCG Neut_1813 1923721 - 1924017 + | transposase IS3/IS911 family protein TERM 1419 1924058 - 1924046 - f 77 -4.8 -5.00138 | CACCCAAAGGAAAAA GACC TATCC GGTC GGCTTGATGTGCCGA Neut_1814 1924065 - 1924892 + | integrase catalytic subunit TERM 1420 1924893 - 1924905 + T 70 -5.5 -4.4078 | AAAAATGTTGCTTAA CTGGA GTG TCCGG TTTTACTTGACCAGG TERM 1421 1925132 - 1925112 - T 76 -8.3 -3.93556 | opp_overlap 1925112 AGGCATCGAATGAAA GTCAGCATT TCC AATGCTGCC TTAATGACCTGGAAA Neut_1816 1925827 - 1925546 - | hypothetical protein Neut_1817 1926056 - 1925811 - | hypothetical protein TERM 1422 1925876 - 1925851 - G 79 -8.3 -4.3739 | gap 1, overlap 1925852 GACCGGGGTACAAAA TCTGTAGCCTCG CTG CGAGGCT-CAGC CATCGAAGCCAGCGA TERM 1423 1925875 - 1925852 - G 79 -11.8 -3.22113 | gap 1, overlap 1925851 ACCGGGGTACAAAAT CTGTAGCCTCG CTG CGAGGCT-CAG CCATCGAAGCCAGCG Neut_1818 1927275 - 1926472 - | integrase catalytic subunit TERM 1424 1926969 - 1926954 - G 74 -2.5 -5.08601 | GGAGTTGAACAAAAA CGAAC TTTGAT GTCCG GTCAATGGCTACAAA Neut_1819 1928200 - 1927409 - | integrase catalytic subunit TERM 1425 1927641 - 1927660 + g 70 -4.2 -4.65747 | TTGTCGTAGCTGTCG CCCTTGCT GCCG ACCGAGGG TTTTATTCCGGCTTC Neut_1820 1928637 - 1928314 - | transposase IS3/IS911 family protein Neut_1821 1929000 - 1928740 - | hypothetical protein Neut_1822 1929547 - 1929188 - | flagellar protein FlaG protein TERM 1426 1929473 - 1929492 + g 76 -8.5 -4.14392 | opp_overlap 1929472 1929469 AATCGAACAATCCAT CGGTGGC ACTGGC GCCGCCG TTTGTGTCTGCGTCT TERM 1427 1929676 - 1929665 - R 86 -3.6 -5.47218 | CTTGACGGAAAAAAA CCGC CATT GCGA GCACTGGTGCGAAGC Neut_1823 1930348 - 1930061 - | excinuclease ABC subunit C TERM 1428 1930384 - 1930372 - R 83 -5.5 -5.24531 | opp_overlap 1930372 ATTGCTGACAAAAAA CACCA TCC TGGCG TTGCTGCTGGATCGC TERM 1429 1930462 - 1930494 + r 95 -15.1 -3.15544 | opp_overlap 1930466, overlap 1930466 GCACTTCAGTGCGAA GCAATCCAGTAAC AATCTAC GTTACTGGATTGC TTCGTGCCCGTGGCA TERM 1430 1930490 - 1930466 - R 74 -9.4 -3.34895 | opp_overlap 1930462 1930466 TTCAGTGCGAAGCAA TCCAGTAACA ATCTA CGTTACTGGA TTGCTTCGTGCCCGT Neut_1824 1932007 - 1930532 - | flagellin domain-containing protein TERM 1431 1932171 - 1932185 + r 70 -2.9 -5.02074 | opp_overlap 1932171 TTAGAGGAATAAATA GAAAA ACAGC TTTTC TTTTTTAACCAGTGA Neut_1825 1933342 - 1932494 - | integrase catalytic subunit TERM 1432 1932726 - 1932745 + g 70 -4.2 -4.65747 | TTGTCGTAGCTGTCG CCCTTGCT GCCG ACCGAGGG TTTTATTCCGGCTTC Neut_1826 1933722 - 1933399 - | transposase IS3/IS911 family protein Neut_1827 1934683 - 1933967 - | hypothetical protein TERM 1433 1934721 - 1934744 + r 100 -15.4 -4.09117 | opp_overlap 1934717 GCCAGCTAATATTTA GTATGCACCG TAAG CGGTGCATAC TTCTTTGTAAGTGGG Neut_1828 1937335 - 1935509 - | DNA mismatch repair protein MutL TERM 1434 1936735 - 1936754 + g 70 -8.6 -3.80625 | gap 1, overlap 1936718 CTGCAGCCTCTGCCG CCTGC-CAG TGG CTGCGCAGG TTTCCATTGTGCCGC TERM 1435 1937698 - 1937716 + G 70 -8.2 -3.71552 | opp_overlap 1937694 TGAAGCAACATGGCA TTGAGGTT TTG AGCCTCAA TTCTGTTGCTGACCT Neut_1829 1937439 - 1938164 + | ribose-5-phosphate isomerase A Neut_1830 1938358 - 1939077 + | phosphate uptake regulator, PhoU TERM 1436 1939585 - 1939611 + G 84 -2.3 -5.55664 | opp_overlap 1939572, overlap 1939572 1939587 1939588 ACTGGAAAGTCTTCC CATTGGTTGTA TCAGC TACAGCCAGTA TTTTTTTCCTGATGG Neut_1831 1939103 - 1940638 + | Ppx/GppA phosphatase Neut_1832 1941096 - 1940647 - | fimbrial protein pilin Neut_1833 1944558 - 1941127 - | putative type 4 fimbrial biogenesis protein PilY1 TERM 1437 1941157 - 1941169 + g 73 -10.5 -3.23395 | CCAGGATCGGCGCGG CGGCG GAG CGCCG TTGCTGATCGTCACT Neut_1834 1945421 - 1944570 - | type IV pilus assembly protein PilX Neut_1835 1946511 - 1945447 - | prepilin-type cleavage/methylation-like Neut_1836 1947023 - 1946529 - | type IV pilus modification protein PilV Neut_1837 1947558 - 1947001 - | fimbrial pilin related signal peptide protein TERM 1438 1947798 - 1947816 + G 100 -11.7 -4.67755 | GTGGTGAGCCGCTTT CGCGTGG CGAAC CCACGCG TTTTTGGCTCAGTGT Neut_1838 1947735 - 1947956 + | hypothetical protein Neut_1839 1948619 - 1947987 - | two component transcriptional regulator, LuxR family protein Neut_1840 1950167 - 1948671 - | multi-sensor signal transduction histidine kinase TERM 1439 1949217 - 1949199 - G 71 -5.9 -4.36914 | opp_overlap 1949199 CTTGTTGCGATAAAA CTCCGGC GCACG GCTGGAG TTATCCAGGCAAGGC TERM 1440 1950604 - 1950589 - R 79 -2.6 -5.40072 | CCGTTTCTAAAAAAA TTGACT GTAA AATCAA TTTTTTATATACAGA Neut_1841 1952380 - 1950833 - | O-antigen polymerase TERM 1441 1952473 - 1952498 + r 73 -10.5 -3.11687 | opp_overlap 1952473 1952478, overlap 1952478 ATACCACCAGAAACA GAAAACCCTGC CAAA GCAGGGTTTTG TTGGATAATAATTAG TERM 1442 1952498 - 1952473 - R 78 -10.5 -3.59266 | opp_overlap 1952473 1952478, overlap 1952478 ATACCACCAGAAACA GAAAACCCTGC CAAA GCAGGGTTTTG TTGGATAATAATTAG TERM 1443 1952493 - 1952478 - R 91 -10.4 -4.85822 | opp_overlap 1952478 1952473, overlap 1952473 ACCAGAAACAGAAAA CCCTGC CAAA GCAGGG TTTTGTTGGATAATA TERM 1444 1952478 - 1952493 + r 91 -10.4 -4.69053 | opp_overlap 1952473 1952478, overlap 1952473 ACCAGAAACAGAAAA CCCTGC CAAA GCAGGG TTTTGTTGGATAATA Neut_1842 1952930 - 1952523 - | fimbrial protein pilin Neut_1843 1954830 - 1953058 - | gamma-glutamyltransferase TERM 1445 1953904 - 1953888 - G 73 -10.9 -3.29471 | overlap 1953902 GCTCCAGCATATTAA GCATCTG TAC CAGATGC ACACCGCCTGAAGAA TERM 1446 1954945 - 1954912 - R 82 -12.5 -2.78816 | opp_overlap 1954943, overlap 1954914 1954916 GTAGTGGTTATGATA GACAGCATGCTCTCC CACG AGAAAGCACGCTGCC CGGTAATTCACAATT TERM 1447 1954943 - 1954914 - R 78 -11.5 -2.94218 | overlap 1954912 1954916 AGTGGTTATGATAGA CAGCATGCTCTCC CACG AGAAAGCACGCTG CCCGGTAATTCACAA Neut_1844 1956065 - 1955145 - | integrase catalytic subunit TERM 1448 1955642 - 1955627 - G 74 -2.5 -5.08601 | GGAGTTGAACAAAAA CGAAC TTTGAT GTCCG GTCAATGGCTACAAA Neut_1845 1956674 - 1956165 - | putative transmembrane protein Neut_1846 1957418 - 1956948 - | transposase, IS4 family protein Neut_1848 1958701 - 1957781 - | integrase catalytic subunit TERM 1449 1958278 - 1958263 - GR 74 -2.5 -5.10208 | GAAGTTGAACAAAAA CGAAC TTTGAT GTCCG GTCAATGGCTACAAA Neut_1849 1959282 - 1958665 - | hypothetical protein Neut_1850 1959940 - 1959539 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1450 1959712 - 1959729 + g 71 -5.5 -4.57569 | overlap 1959713 GCGTGCCACCATGCC CGGAAGG AGCC CCTTCCA TTTTTACCAACATCC Neut_1851 1960713 - 1960144 - | hypothetical protein Neut_1852 1961420 - 1960875 - | hypothetical protein Neut_1853 1962746 - 1961448 - | hypothetical protein TERM 1451 1961827 - 1961837 + g 74 -6.8 -4.35644 | overlap 1961824 AGATCATCTCCGGTC GGCA CGA TGCC TTCTTTTATCCTGGT Neut_1854 1964239 - 1962761 - | hypothetical protein TERM 1452 1963626 - 1963640 + g 73 -6.4 -4.4891 | GCCTTTTTAAGACGT TCTTCC CGT GGGAGA TTTTCTAGTCCTGCA TERM 1453 1963770 - 1963780 + g 86 -6.8 -4.92363 | opp_overlap 1963769 1963770, overlap 1963761 1963760 GGAGTTGGACCAAAT GCAC TTG GTGC TTTTTGTCCCTCTTT Neut_1855 1965221 - 1964301 - | integrase catalytic subunit Neut_1856 1965733 - 1965185 - | hypothetical protein Neut_1857 1966730 - 1965900 - | hypothetical protein Neut_1858 1967284 - 1966823 - | Ferritin, Dps family protein Neut_1859 1970622 - 1967470 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1454 1968678 - 1968697 + g 77 -10.6 -3.60948 | GGAAGTCGATTGCCT CGCGCACG TCGG CGAGCGCG TTTGACACTGTCTTG Neut_1860 1971277 - 1970852 - | hypothetical protein Neut_1861 1971641 - 1972012 + | hypothetical protein TERM 1455 1972015 - 1972034 + T 73 -6.4 -4.37092 | CTCATCGCGCTGAGT TCTGGTCG CAAT TGACCGGA TTTTCTGCACGGCGT Neut_1862 1973251 - 1972289 - | integrase catalytic subunit TERM 1456 1972786 - 1972771 - G 74 -2.5 -5.08601 | GGAGTTGAACAAAAA CGAAC TTTGAT GTCCG GTCAATGGCTACAAA TERM 1457 1974022 - 1974043 + G 79 -8.7 -4.17523 | overlap 1974010 1974041 CCATCGCTCTGTTTT CCAGCGTGA TTTC TCACCCTGG TTTTACCGCTTCTTT Neut_1863 1973523 - 1974125 + | hypothetical protein Neut_1864 1976646 - 1974247 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 1458 1976172 - 1976187 + g 73 -5.4 -4.70879 | GCAGCACCTTCACAT CAACTC CGCC GGGTTG TTTTTCCCCTTTGCG TERM 1459 1976621 - 1976631 + g 76 -4.6 -4.9725 | GTTTTACTATTGGAA CGGG AAC CTCG TTTTTCTGTGGCCAT Neut_1865 1977112 - 1977498 + | hypothetical protein TERM 1460 1978210 - 1978176 - T 81 -9.4 -3.91072 | opp_overlap 1978176, overlap 1978181 1978184 GGAAAGCGGTATAAA TTAAATAATCCCCGAC AAA GCTGGGGACTACTTAA TTATTTGATTGGTCT TERM 1461 1978205 - 1978181 - T 72 -7.1 -4.13995 | opp_overlap 1978176, overlap 1978176 1978184 GCGGTATAAATTAAA TAATCCCCGAC AAA GCTGGGGACTA CTTAATTATTTGATT TERM 1462 1978202 - 1978184 - T 72 -6.6 -4.18676 | opp_overlap 1978176, overlap 1978181 1978176 GTATAAATTAAATAA TCCCCGAC AAA GCTGGGGA CTACTTAATTATTTG Neut_1866 1978939 - 1978211 - | phospholipid/glycerol acyltransferase Neut_1867 1979481 - 1978939 - | D,D-heptose 1,7-bisphosphate phosphatase Neut_1868 1981655 - 1979508 - | glycine--tRNA ligase TERM 1463 1980737 - 1980726 - G 70 -2.2 -5.04356 | overlap 1980716 GGAAACAATCAAAAA CCGA TTGG TCAG TTTTCCATCAGCATC glyQ 1982575 - 1981652 - | glycyl-tRNA synthetase subunit alpha Neut_1870 1984101 - 1982608 - | apolipoprotein N-acyltransferase Neut_1871 1984525 - 1984157 - | hypothetical protein TERM 1464 1985421 - 1985433 + G 76 -6.9 -4.56597 | opp_overlap 1985421 1985422 GCTCCTGGCGTACAA CCCGG TGC CTGGG TTTTTGCCCCAAAAA Neut_1872 1984980 - 1986689 + | multicopper oxidase, type 3 Neut_1873 1986689 - 1987783 + | hypothetical protein TERM 1465 1987837 - 1987795 - f 87 -5.6 -5.39681 | gap 1, opp_overlap 1987800, overlap 1987796 1987800 ATAAGTAAACAAAAA TGTAAGTCATGTCCCTTCG CATAGC CGTGGGGACATGACTT-CT TCCTCCGTAACTTGC TERM 1466 1987836 - 1987796 - f 77 -9.1 -3.81369 | gap 1, opp_overlap 1987800, overlap 1987795 1987800 TAAGTAAACAAAAAT GTAAGTCATGTCCCTTCG CATAGC CGTGGGGACATGACTT-C TTCCTCCGTAACTTG TERM 1467 1987800 - 1987833 + F 100 -13.2 -3.73647 | opp_overlap 1987796 1987795 1987800 TAAACAAAAATGTAA GTCATGTCCCTTCG CATAGC CGTGGGGACATGAC TTCTTCCTCCGTAAC TERM 1468 1987833 - 1987800 - f 81 -11 -3.54768 | opp_overlap 1987800, overlap 1987796 1987795 TAAACAAAAATGTAA GTCATGTCCCTTCG CATAGC CGTGGGGACATGAC TTCTTCCTCCGTAAC TERM 1469 1988334 - 1988351 + F 76 -5.5 -4.87665 | opp_overlap 1988327 GCCATAAACCCGTGA CACCGGT AAAA GCTGGTG TTTTTATCGATCCCG TERM 1470 1988964 - 1988974 + G 84 -2.6 -5.55664 | GTACGACGTGCGCAG TAAA TGG TTTA TTTTTTTACTGATAC Neut_1874 1988827 - 1989351 + | cytochrome c oxidase, subunit II TERM 1471 1990736 - 1990762 + G 70 -8.1 -3.72576 | gap 1, overlap 1990729 1990733 ATCCCTCGCCGCTGG GCCG-TCCATTT ACCG GAATGGATCGGC TTTGCTCAAGCAGGG Neut_1875 1989389 - 1990867 + | cytochrome c oxidase, subunit I Neut_1876 1990963 - 1991592 + | electron transport protein SCO1/SenC Neut_1877 1991576 - 1992145 + | putative transmembrane protein TERM 1472 1992189 - 1992142 - T 100 -18 -3.82419 | opp_overlap 1992142 1992148, overlap 1992148 AAAAATTATCAACAA CTGAAACCCGCAGTGATC TGCAGGAAGATG GATCACCGCGGGTTTCAG TTTCAGTTACTATGT TERM 1473 1992142 - 1992189 + T 100 -17.2 -3.80189 | opp_overlap 1992142 1992148, overlap 1992148 AAAAATTATCAACAA CTGAAACCCGCAGTGATCTG CAGGAAGA TGGATCACCGCGGGTTTCAG TTTCAGTTACTATGT TERM 1474 1992183 - 1992148 - T 81 -9.8 -3.8646 | opp_overlap 1992142 1992148, overlap 1992142 TATCAACAACTGAAA CCCGCAGTGATC TGCAGGAAGATG GATCACCGCGGG TTTCAGTTTCAGTTA TERM 1475 1992148 - 1992183 + T 79 -9 -3.8698 | opp_overlap 1992148 1992142, overlap 1992142 TATCAACAACTGAAA CCCGCAGTGATCTG CAGGAAGA TGGATCACCGCGGG TTTCAGTTTCAGTTA Neut_1878 1993109 - 1992192 - | formate/nitrite transporter TERM 1476 1992800 - 1992788 - G 70 -4.8 -4.67234 | overlap 1992791 AGCCAACCGGAAAAA GCAG GCCTG CTGC TGCCGTCGGCCATCC Neut_1879 1994467 - 1993460 - | UDP-glucose 4-epimerase TERM 1477 1993739 - 1993707 - G 71 -10.5 -3.06671 | overlap 1993709 AGATTGACTGCAAGA CACTGCGGTGTGGCA AGG TGCCCCAGCGCACTG AGATGCCCCAGTGCC TERM 1478 1994527 - 1994539 + r 79 -7.7 -4.3586 | ACTGCTGCCGCCGCG CAAGC AAA GCTTG TTTTCATCTAAATAC Neut_1880 1995430 - 1994543 - | glucose-1-phosphate thymidylyltransferase Neut_1881 1995660 - 1996580 + | 2-hydroxy-3-oxopropionate reductase TERM 1479 1997105 - 1997132 + G 73 -5.4 -4.62054 | opp_overlap 1997105 1997106, overlap 1997106 GTGACGTGCTGGAAA TCGGTGCTGACG CACT CGATAGCCCCGG TTTTGATTTGCTTGC TERM 1480 1997224 - 1997203 - g 71 -6.6 -4.18094 | overlap 1997222 GAAATCACGGTAAAA CTGCTTCC CAAACC GGAAACAG TGAAACTGGTCATGG Neut_1882 1996570 - 1998024 + | FAD linked oxidase domain-containing protein glcE 1998049 - 1999149 + | glycolate oxidase FAD binding subunit glcF 1999153 - 2000415 + | glycolate oxidase iron-sulfur subunit Neut_1885 2001157 - 2000441 - | hypothetical protein TERM 1481 2000957 - 2000968 + g 73 -5.8 -4.59027 | overlap 2000965 GGGTGCTTCTCTAAC CTGC GATT GCAG TTTTGTCTGCTGCTT Neut_1886 2001955 - 2001182 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase sbcB 2003489 - 2002029 - | exonuclease I Neut_1888 2004543 - 2003695 - | integrase catalytic subunit TERM 1482 2003927 - 2003946 + g 70 -4.2 -4.65747 | TTGTCGTAGCTGTCG CCCTTGCT GCCG ACCGAGGG TTTTATTCCGGCTTC Neut_1889 2004923 - 2004600 - | transposase IS3/IS911 family protein TERM 1483 2005233 - 2005192 - g 70 -2.4 -4.94222 | overlap 2005193 2005194 2005199 AAGAACTCATAAAAA GTGCAAAGGA-TCGGCTCAT CCTC ATCAGCCCATTCCTTCGC-C TGAATGACAGAATCA Neut_1890 2005134 - 2005829 + | hypothetical protein TERM 1484 2005955 - 2005990 + T 81 -11.4 -3.19175 | opp_overlap 2005954, overlap 2005957 CATTCAGGCCAATAC TGTTTTGATGTGGTTT AATG AAACCACATCAAAGTG TTGGATCTGTTCACC TERM 1485 2005957 - 2005988 + T 93 -14 -3.15583 | opp_overlap 2005954, overlap 2005955 TTCAGGCCAATACTG TTTTGATGTGGTTT AATG AAACCACATCAAAG TGTTGGATCTGTTCA Neut_1891 2006979 - 2006125 - | 5,10-methylenetetrahydrofolate reductase Neut_1892 2008696 - 2007260 - | S-adenosyl-L-homocysteine hydrolase TERM 1486 2008797 - 2008817 + r 81 -11.3 -3.15427 | opp_overlap 2008792 2008797 TCGGTACAAATGGAA CATCATTCA CGC TGAATGATG TTGATGAAAAATATT TERM 1487 2008817 - 2008797 - R 83 -11.3 -3.32997 | opp_overlap 2008797, overlap 2008792 TCGGTACAAATGGAA CATCATTCA CGC TGAATGATG TTGATGAAAAATATT Neut_1893 2009995 - 2008832 - | S-adenosylmethionine synthetase TERM 1488 2009229 - 2009205 - G 70 -4.2 -4.62069 | TCCTTACCGGAAAAA GCACCGCC ACCATGATG GGCTGTGC CACCGTAAGTATCCA TERM 1489 2009506 - 2009526 + g 74 -3.9 -4.97402 | ATTTGGCATCCGGAC GCAGCCA TGACAGC TGGCCGC TTTTTCTCAATTTTG TERM 1490 2009725 - 2009712 - G 74 -8.1 -4.07885 | opp_overlap 2009719 GACTGTTTGTTAAAA GCGGT CAGC ACCGC GCAGGTGCTTGCATC Neut_1894 2010288 - 2010986 + | short-chain dehydrogenase/reductase SDR TERM 1491 2011249 - 2011274 + G 72 -4.1 -4.85599 | GAAATCTACAAACTT TCAGAGTTATA CTTG TATCACTTTGA TTTTTATAGACTCAA Neut_1895 2011033 - 2011509 + | hypothetical protein TERM 1492 2012010 - 2012000 - g 91 -3.2 -5.82172 | ATTAATACAAAAAAA CAAG AAA CCTG CGCCAGTCGCTCATT Neut_1896 2011506 - 2012813 + | N-acetylmuramoyl-L-alanine amidase Neut_1897 2013620 - 2012868 - | Zinc finger-domain-containing protein prmA 2014558 - 2013617 - | ribosomal protein L11 methyltransferase Neut_1899 2015952 - 2014594 - | acetyl-CoA carboxylase, biotin carboxylase Neut_1900 2016482 - 2016024 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein Neut_1901 2017130 - 2016693 - | 3-dehydroquinate dehydratase Neut_1902 2017310 - 2018419 + | glycine oxidase ThiO Neut_1903 2019397 - 2018426 - | hydroxymethylbutenyl pyrophosphate reductase TERM 1493 2018968 - 2018980 + g 86 -3.3 -5.56673 | opp_overlap 2018968 CCGCTGTTTCCACAA GGTAC ATC GTCCC TTTTTTCTTCTCGAT Neut_1904 2019687 - 2019971 + | hypothetical protein Neut_1905 2020011 - 2021090 + | histidinol-phosphate aminotransferase hisB 2021133 - 2021720 + | imidazoleglycerol-phosphate dehydratase TERM 1494 2021749 - 2021730 - f 86 -3.6 -5.47218 | gap 1 CTGTAGGTAAAAAAA CGC-TCAGA ACA TCTGATACG AACATGAACTCGATT hisH 2021753 - 2022391 + | imidazole glycerol phosphate synthase subunit HisH TERM 1495 2022524 - 2022506 - g 73 -8.8 -3.65425 | overlap 2022515 2022516 GCTATAGATCTGAAA GACGGACA ATG CGTCCGCC TGAAGCAAGGCATCA Neut_1908 2022476 - 2023222 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 1496 2023997 - 2024011 + G 81 -6.4 -4.93365 | overlap 2023999 GCCATGCTGATGCAG TGCTGG CAG CCAGTA TTTTTCATTATGGCG Neut_1909 2023312 - 2024088 + | imidazole glycerol phosphate synthase subunit HisF Neut_1910 2024228 - 2024617 + | phosphoribosyl-AMP cyclohydrolase TERM 1497 2024714 - 2024704 - g 71 -6.8 -4.16943 | overlap 2024705 TCCTACATCGCAAAA CTGC TAA GCAG CAACGAAGATAAAGT Neut_1911 2024614 - 2024967 + | phosphoribosyl-ATP pyrophosphohydrolase Neut_1912 2024969 - 2025319 + | histidine triad (HIT) protein TERM 1498 2025427 - 2025411 - g 76 -3 -5.14563 | gap 1 TTTGGGACCAAAAAA CTGCGCA ACCT TG-GCAG CGATCTGGGAGGAGC tatA 2025339 - 2025572 + | twin argininte translocase protein A TERM 1499 2025574 - 2025555 - f 87 -5 -5.33331 | GAAATAGAAGAAAAA GATCAGAC AAAA GTGTGATC TGACAATATGGCTCT Neut_1914 2025658 - 2026050 + | twin-arginine translocation protein, TatB subunit Neut_1915 2026141 - 2026917 + | Sec-independent protein translocase, TatC subunit TERM 1500 2027885 - 2027873 - g 76 -3.3 -5.15117 | overlap 2027883 2027884 TAAAAGCGGAAAAAA GGGAT TAA AACCC ACCCTCAGTTTTGGG Neut_1916 2027388 - 2029226 + | TonB-dependent vitamin B12 receptor Neut_1917 2029236 - 2029826 + | hypothetical protein Neut_1918 2029826 - 2030434 + | cob(I)alamin adenosyltransferase Neut_1919 2030938 - 2031276 + | hypothetical protein Neut_1920 2032210 - 2033016 + | PEP motif-containing protein metG 2035156 - 2033051 - | methionyl-tRNA synthetase TERM 1501 2034799 - 2034823 + g 72 -3.5 -4.76041 | opp_overlap 2034795, overlap 2034800 2034806 GTTCTATCGAACGGA TTGCAATCAGC CCG GCTGCTTTCAG TTTTTGGTAAATATC Neut_1922 2035262 - 2036347 + | hypothetical protein dcd 2036360 - 2036926 + | deoxycytidine triphosphate deaminase Neut_1924 2037348 - 2037007 - | cupin 2 domain-containing protein Neut_1925 2038163 - 2037393 - | hypothetical protein TERM 1502 2038716 - 2038706 - g 82 -8.2 -4.45945 | opp_overlap 2038705 ATTCAGGAAGGAAAA GCCG AAA CGGC GCTTGATTCTATCCG Neut_1926 2038364 - 2041102 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC Neut_1927 2041349 - 2041726 + | hypothetical protein Neut_1928 2042915 - 2041920 - | hypothetical protein TERM 1503 2042091 - 2042115 + g 72 -8.6 -3.84406 | opp_overlap 2042091 GGAAGGATTATTGAA TCGCAAGCGA CAGAT TGGCTTGCGA TTATTGTCATCAAGC Neut_1929 2043450 - 2042980 - | transposase, IS4 family protein TERM 1504 2044346 - 2044361 + G 74 -2.5 -5.08601 | TTTGTAGCCATTGAC CGGAC ATCAAA GTTCG TTTTTGTTCAACTCC Neut_1931 2043923 - 2044843 + | integrase catalytic subunit Neut_1932 2047195 - 2045009 - | TonB-dependent receptor TERM 1505 2046527 - 2046543 + g 71 -7.9 -3.96842 | overlap 2046528 TGGAAGCGTGTGCCC TGGCCGC CCT GTGGCCG TTGTTGTCTTGAAAT TERM 1506 2047171 - 2047152 - G 76 -7.8 -4.31904 | ACAAAGGAAGATAAA GCAACAGC TATA GCTGATGC GAATGGAGTGACACG TERM 1507 2047348 - 2047367 + H 85 -8 -4.63007 | opp_overlap 2047348 CACGCCTCAATTTAA GATAGTAA TTAG TTACTATC TTTTATGTGGTTATA Neut_1933 2047388 - 2047996 + | transcriptional regulator, TetR family protein Neut_1934 2047993 - 2049144 + | RND family efflux transporter MFP subunit TERM 1508 2049979 - 2049991 + G 70 -4.8 -4.59944 | opp_overlap 2049949, overlap 2049950 TGATTGCCACCTCTG CCGA ACAGA TCGG TTTATTTCTGATCAT Neut_1935 2049141 - 2050340 + | hypothetical protein Neut_1936 2050348 - 2051151 + | ABC transporter-related protein Neut_1937 2051699 - 2051133 - | hypothetical protein TERM 1509 2051298 - 2051267 - G 82 -6.6 -4.8143 | overlap 2051269 2051287 GGAATAATCCAAAAA CACCCTGCCAGATT ACCA AACCTAGCAAGGCA GGAAAGAAAAGAATA TERM 1510 2051296 - 2051269 - G 77 -9.2 -4.01369 | overlap 2051267 2051287 AATAATCCAAAAACA CCCTGCCAGATT ACCA AACCTAGCAAGG CAGGAAAGAAAAGAA Neut_1938 2052221 - 2051772 - | ferric uptake regulator, Fur family protein Neut_1939 2052432 - 2052914 + | SmpA/OmlA domain-containing protein Neut_1940 2052911 - 2053717 + | dihydrodipicolinate reductase Neut_1941 2055439 - 2053931 - | protein of unknown function DUF853, NPT hydrolase putative TERM 1511 2055695 - 2055637 - H 100 -25.1 -3.14053 | opp_overlap 2055640 2055648 2055650 2055653, overlap 2055653 TCAAATGATTTAACA GCATCCGAATATACAATCAGTGTAATA CATGC TCTTACCCTGATTGTATATTCGGATGC TGTCCAAACACAAAA TERM 1512 2055640 - 2055692 + H 100 -19.6 -2.62184 | opp_overlap 2055637 2055653, overlap 2055648 2055650 2055653 AATGATTTAACAGCA TCCGAATATACAATCAGTGTAATA CATGC TCTTACCCTGATTGTATATTCGGA TGCTGTCCAAACACA Neut_1942 2055692 - 2056042 + | type I site-specific deoxyribonuclease HsdM Neut_1943 2056039 - 2056197 + | mobilization/cell filamentation proteins-like TERM 1513 2057190 - 2057180 - g 72 -8.2 -3.8969 | overlap 2057181 CGACTGAGAGAAGAA CGCG CTT CGCG GGGAATTGCCAGATC Neut_1945 2056850 - 2058331 + | RND efflux system, outer membrane lipoprotein, NodT family protein TERM 1514 2058486 - 2058507 + F 77 -9.5 -3.61398 | gap 1, opp_overlap 2058480 CTAAAACAGCCTGCC CCGGCAGTAA TGG TTAC-GCCGG TTATTCAGGAAAAAG Neut_1946 2058495 - 2059559 + | RND family efflux transporter MFP subunit TERM 1515 2060883 - 2060866 - g 100 -6.3 -5.64006 | ATGCAACCAAAAAAA CAATGAC CGAA GTCACTG GTCCTGTTATTGCCA TERM 1516 2061774 - 2061756 - g 71 -5.8 -4.4078 | CGCCTGCAAGCAAAA GCGCTGGG CAT CCCCGTGC GAGAGATATTTTCAA TERM 1517 2061974 - 2061964 - g 83 -5.4 -5.16841 | opp_overlap 2061964 GGACATTAACAAAAA CATC CTC GATG TTGGGTTCTGATAGC Neut_1947 2059563 - 2062427 + | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family protein Neut_1948 2062418 - 2062678 + | putative multidrug efflux membrane fusion protein TERM 1518 2062907 - 2062917 + G 73 -5.4 -4.66318 | overlap 2062890 GGTGACCTACAAGGC TGTC ACC GACA TTTTCTTGACCTGCT apaH 2062874 - 2063674 + | diadenosine tetraphosphatase Neut_1950 2064425 - 2063628 - | phospholipid/glycerol acyltransferase TERM 1519 2063853 - 2063868 + g 73 -10.4 -3.2614 | GACCACACTTGTATT CCGCGA ACCA TCGCGG TTGCTGTAACGAATC Neut_1951 2065433 - 2064498 - | ribokinase-like domain-containing protein TERM 1520 2065390 - 2065363 - G 72 -10 -3.38812 | opp_overlap 2065360 2065363 2065382, overlap 2065361 2065388 TTGTCCGGAAGAATA TGGCGTTTGAAA CGGT CTTCAAACACCA TGATTGTGTCATAGG Neut_1952 2066916 - 2065465 - | glycine dehydrogenase subunit 2 Neut_1953 2068346 - 2066991 - | glycine dehydrogenase subunit 1 Neut_1954 2068945 - 2068556 - | glycine cleavage system H protein gcvT 2070107 - 2069016 - | glycine cleavage system aminomethyltransferase T TERM 1521 2069710 - 2069748 + g 90 -14.8 -3.30124 | overlap 2069715 ATGGTTAAATCAGGT GCATGTTGACTGGATTGC AAG GTAATCCAGTCAATATCC TTATCCGCCGTACCG TERM 1522 2069715 - 2069743 + g 90 -15.5 -2.96274 | overlap 2069710 TAAATCAGGTGCATG TTGACTGGATTGC AAG GTAATCCAGTCAA TATCCTTATCCGCCG TERM 1523 2070362 - 2070393 + r 71 -10.3 -2.81133 | gap 1, overlap 2070337 2070322 GGGGTTACGCCTTCG GTGACGCTGTGTTT TATTC AGACACAGCG-CAC TCTCCTGCCTGGATG TERM 1524 2070721 - 2070696 - R 79 -9.1 -3.89041 | AGACAGCAAACACAA TCAGCCTGTTG CTGA CAACAAACTGA ACAGAAATTTCTCTC TERM 1525 2070794 - 2070769 - R 80 -10.5 -3.727 | gap 1, overlap 2070771 CCGAGGAGATTCAAA GA-GTGCGCTCG TGC CAAGCGCACATC AATAACAAATCCAGC TERM 1526 2070791 - 2070771 - R 100 -13.3 -3.44487 | overlap 2070769 GAGGAGATTCAAAGA GTGCGCTCG TGC CAAGCGCAC ATCAATAACAAATCC Neut_1956 2071750 - 2070845 - | coproporphyrinogen III oxidase TERM 1527 2073067 - 2073046 - g 72 -10.1 -3.39556 | overlap 2073049 AATCCGGTAACAACA CAACCCGAC GTAC GCCGGGCTG AAGATCCGGAACCGG TERM 1528 2073064 - 2073049 - g 72 -8.2 -3.83318 | overlap 2073046 CCGGTAACAACACAA CCCGAC GTAC GCCGGG CTGAAGATCCGGAAC Neut_1957 2071924 - 2073096 + | chorismate synthase Neut_1958 2073311 - 2073664 + | hypothetical protein Neut_1959 2073785 - 2074558 + | TraT complement resistance family protein Neut_1960 2074616 - 2074942 + | hypothetical protein TERM 1529 2076305 - 2076320 + GT 74 -2.5 -5.08601 | TTTGTAGCCATTGAC CGGAC ATCAAA GTTCG TTTTTGTTCAACTCC Neut_1962 2078965 - 2076860 - | TonB-dependent siderophore receptor Neut_1961 2075882 - 2076913 + | integrase catalytic subunit TERM 1530 2078277 - 2078259 - GT 80 -8.8 -4.18197 | ACCCGCCAGTCAAAA GCGCCC GAAACAA GGGCGC GGTGACCGGAAAAGT Neut_1964 2080640 - 2079984 - | hypothetical protein Neut_1965 2080808 - 2082091 + | hypothetical protein Neut_1966 2082095 - 2082625 + | hypothetical protein Neut_1967 2082628 - 2083329 + | ATP dependent DNA ligase Neut_1968 2083379 - 2083753 + | hypothetical protein Neut_1969 2085257 - 2083800 - | catalase Neut_1970 2086630 - 2085284 - | hypothetical protein TERM 1531 2086088 - 2086077 - G 79 -7.2 -4.46212 | TCGTGCACCAGAAAA CGGG TAAA CCCG TCCGGATGGATCTGG Neut_1971 2087465 - 2086665 - | hypothetical protein Neut_1972 2087998 - 2087543 - | hypothetical protein TERM 1532 2089039 - 2089009 - R 100 -18.4 -2.91239 | CAGACATTTCAGATA TGCTGCCAGTGATG ACA CATCACTGGCAGCC GCAATCGCTCGATAA TERM 1533 2089684 - 2089664 - R 73 -2.5 -5.07652 | TCCTGGAAAACAAAA GGCTCATAC AGT GCATTAACC TTGGCATTGTTCACC Neut_1974 2090740 - 2089922 - | short-chain dehydrogenase/reductase SDR Neut_1975 2092219 - 2090741 - | cellulose synthase (UDP-forming) TERM 1534 2092191 - 2092180 - G 81 -5.8 -5.02323 | CCACCAGAAAGAAAA CAGC CTGG GCTG CATAGGAAAGCACAG Neut_1976 2093306 - 2092221 - | putative spore protein Neut_1977 2094646 - 2093339 - | glycosyl transferase, group 1 Neut_1980 2096266 - 2095796 - | transposase, IS4 family protein TERM 1535 2096932 - 2096912 - R 81 -11.1 -3.53224 | opp_overlap 2096910 CATTCGCTGGCTAAA TCGCCGGTG CCA CACCGGGGA AGGCTTTTGTGGCAA Neut_1982 2098127 - 2097048 - | putative glycosyltransferase TERM 1536 2097872 - 2097842 - G 73 -6.1 -4.49314 | gap 1, overlap 2097839 2097844 TACCATCAAAAACAA CAGCTGCTGGA-CG AACA CGCTCCAGCATCAG GCCAAGGCGAAGACA TERM 1537 2098016 - 2098004 - G 84 -4.8 -5.34857 | TCAAAGAAAAGAAAA CAGG ACAAA CCTG TTCACGCAACTGACG Neut_1983 2098463 - 2098161 - | histone family protein nucleoid-structuring protein H-NS Neut_1984 2099213 - 2098971 - | putative transposase TERM 1538 2099071 - 2099082 + g 80 -3 -5.26316 | overlap 2099062 TTGAACTCTTTGCGT TTTC CAAA GAAA TTTTTTATGAGATGG TERM 1539 2099301 - 2099243 - H 71 -8.9 -3.31501 | gap 2, opp_overlap 2099243 2099247 AGCAAGGCGCCAGAA TCTATGCCAGTGATCAGCTCCTTGACGCC TTT GATGTCATGGCGCTGACC-C-GGCATTGA ATTTTCTGCGACGAA TERM 1540 2100286 - 2100312 + G 71 -5.8 -4.28994 | overlap 2100290 ATACTGTGCGATTCT TGAAGGCGTGTC TAT GATTCGCCTTGA TTTTGCTGGCTGGTC Neut_1985 2099897 - 2100652 + | hypothetical protein Neut_1986 2101540 - 2102901 + | hypothetical protein TERM 1541 2102954 - 2102944 - f 73 -2.6 -5.08824 | CTTTTATCCAAAAAA TTAT CAG ATAA AAATTAGGATGAATC Neut_1987 2103017 - 2103631 + | electron transport protein SCO1/SenC TERM 1542 2104002 - 2104016 + G 76 -7.2 -4.34402 | opp_overlap 2104002 CAGATTCATTAGAAA TTCATC CCT GATGAA TTTTAATATCACACC TERM 1543 2104016 - 2104002 - g 71 -7.2 -3.98661 | opp_overlap 2104002 CAGATTCATTAGAAA TTCATC CCT GATGAA TTTTAATATCACACC Neut_1988 2103628 - 2104263 + | hypothetical protein TERM 1544 2104326 - 2104348 + T 95 -14.2 -3.14564 | opp_overlap 2104340 AACTGATTGACATCC TCCTTCGCCT AAA AGGCGGAGGA TTCCTACGACGCTCA Neut_1990 2105128 - 2104841 - | hypothetical protein Neut_1991 2105682 - 2105299 - | hypothetical protein TERM 1545 2106431 - 2106446 + G 74 -2.5 -5.08601 | TTTGTAGCCATTGAC CGGAC ATCAAA GTTCG TTTTTGTTCAACTCC Neut_1992 2106008 - 2106928 + | integrase catalytic subunit Neut_1994 2107298 - 2107768 + | transposase, IS4 family protein Neut_1995 2110039 - 2107910 - | phosphate acetyltransferase TERM 1546 2108173 - 2108143 - G 73 -11.8 -2.50016 | overlap 2108140 CGCGACCAGCAACAG GTGATCCAGGCAGC TTC GCAGCCCCGATCAC TGGGTCGCTCGCTGC TERM 1547 2108822 - 2108806 - G 77 -12.3 -3.08508 | overlap 2108803 CACCGCGCAAAAGTA GCGTGCT CGC AGCACGC AGGATCCGGTCGTCA TERM 1548 2109754 - 2109766 + g 70 -9.1 -3.64703 | opp_overlap 2109752 TGACCGCATCACATT GCGCT TCG AGCGC TTTGAATCGAGCCAC Neut_1996 2111403 - 2110378 - | fructose-bisphosphate aldolase Neut_1997 2111830 - 2111549 - | hypothetical protein TERM 1549 2112365 - 2112340 - g 71 -10.3 -3.16475 | TACGCACAGATCGAA GCTGCCAAGCG TCCG CGCAAGGCAGC GCTTGAAAAGGCTGC Neut_1998 2112238 - 2112420 + | transcriptional regulator, XRE family protein TERM 1550 2112839 - 2112826 - g 84 -2.3 -5.66684 | overlap 2112815 CAAGGCAGAAAAAAA CCTGC ACAA GCATG GCGTCCGTTTCGAGG Neut_1999 2112713 - 2113054 + | hypothetical protein Neut_2000 2113044 - 2113325 + | hypothetical protein Neut_2001 2114516 - 2113668 - | integrase catalytic subunit TERM 1551 2113900 - 2113919 + g 70 -4.2 -4.65747 | TTGTCGTAGCTGTCG CCCTTGCT GCCG ACCGAGGG TTTTATTCCGGCTTC Neut_2002 2114896 - 2114573 - | transposase IS3/IS911 family protein Neut_2003 2116862 - 2114880 - | beta-ketoacyl synthase TERM 1552 2115830 - 2115854 + g 79 -7.1 -4.67168 | TGTGTCCAAGATTGG CCTTGACCGAT CCG ATCGGCAAAGG TTTTTCGCGCTTTTT TERM 1553 2117181 - 2117160 - R 77 -3.1 -5.31158 | opp_overlap 2117161 2117180, overlap 2117154 2117161 2117180 TAAAAAAAGTAAAAA TGATTTTAT AAAG ATAAAATCT ATTGTCTCCAAACAG TERM 1554 2117431 - 2117475 + r 73 -5 -4.61231 | gap 1, opp_overlap 2117427 2117444 GGACTATCAAACCTG TGAGGC-AGGTAAATCAAGCG AGAA CGCTTGATCAGCCACGCCTTA TTTTTGCCGCTATCG TERM 1555 2117461 - 2117444 - R 77 -9.9 -3.6682 | opp_overlap 2117431 TGTGAGGCAGGTAAA TCAAGCG AGAA CGCTTGA TCAGCCACGCCTTAT Neut_2004 2119068 - 2117485 - | L-aspartate oxidase TERM 1556 2118878 - 2118864 - G 70 -10 -3.21099 | opp_overlap 2118864 GCCCCGCACCAGCAA TCAGCG TAT CGCTGA TATGTGCTTCCAGCG Neut_2005 2119318 - 2120238 + | branched-chain amino acid aminotransferase Neut_2006 2120263 - 2120472 + | hypothetical protein Neut_2007 2120536 - 2121915 + | phosphomannomutase TERM 1557 2122780 - 2122770 - g 70 -3.2 -4.87665 | TTTTATTGATAAAAA CAGA ATC TCCG GAGTATTGATTGGTT Neut_2008 2121952 - 2123559 + | NAD+ synthetase Neut_2009 2123715 - 2125229 + | peptidase M48, Ste24p Neut_2010 2125309 - 2126454 + | RND family efflux transporter MFP subunit Neut_2011 2126465 - 2127232 + | ABC transporter-related protein TERM 1558 2127979 - 2127943 - g 71 -10.2 -3.16981 | GAGAACGACATGGAA GCTGCCGAAGCAGA GATCACGCA TCTGCTCCGTCAGC GCCACCGCATCAGCA Neut_2012 2127229 - 2128452 + | hypothetical protein TERM 1559 2130224 - 2130247 + G 70 -2.4 -5.00616 | gap 1, overlap 2130225 AGATCGCACGGTGGT GGCTCGAGCAC GCC GT-CTTGAGCG TTTTTTAACCCAGCC Neut_2013 2128968 - 2130425 + | F0F1 ATP synthase subunit beta TERM 1560 2130558 - 2130610 + G 100 -10.6 -5.28683 | gap 1, overlap 2130560 ACACTGATTTTGTTG CTGCTTTGCTGCCATCGGTATTGGT GATT ACCGATGCTGAGGGC-GCGGAGCTG TTTTTTGGTATTGAT TERM 1561 2130560 - 2130608 + G 95 -11.8 -4.26398 | gap 1, overlap 2130558 ACTGATTTTGTTGCT GCTTTGCTGCCATCGGTATTGGT GATT ACCGATGCTGAGGGC-GCGGAGC TGTTTTTTGGTATTG Neut_2014 2130422 - 2130832 + | H+-transporting two-sector ATPase, delta/epsilon subunit Neut_2015 2130829 - 2131110 + | F0F1-ATPase subunit, putative Neut_2016 2131117 - 2131449 + | hypothetical protein Neut_2017 2131471 - 2132163 + | F0F1 ATP synthase subunit A Neut_2018 2132166 - 2132444 + | F0F1 ATP synthase subunit C Neut_2019 2132451 - 2133221 + | H+-transporting two-sector ATPase, B/B' subunit Neut_2020 2133234 - 2134784 + | ATP synthase F1, alpha subunit Neut_2021 2134861 - 2135658 + | H+-transporting two-sector ATPase, gamma subunit TERM 1562 2136628 - 2136615 - g 74 -6.7 -4.43477 | opp_overlap 2136615 GGGAGCCAATCAAAA TGGCA GGTG TGCCA TTTCATGCGGCGGAT TERM 1563 2138354 - 2138370 + G 79 -6.5 -4.63218 | opp_overlap 2138339 GCGCTAATTATTCTG CTAGCGC ATT GCGGTAG TTTTGTTCCAGCCGG TERM 1564 2138929 - 2138905 - g 100 -15.7 -4.32651 | AACAATTGAGGAAAA CGCGGAAGCTG CTC CTGCTTCCGCG CATCCGGTGCTCGAT Neut_2022 2136395 - 2139037 + | DNA mismatch repair protein Neut_2023 2139551 - 2139072 - | FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) TERM 1565 2139460 - 2139475 + g 74 -7.6 -4.20783 | opp_overlap 2139445 2139459 2139456 CCACCATGCAAGTAG CTGATG GGTT CATCAG TTTCTTCCATCAGAT TERM 1566 2139561 - 2139573 + r 73 -9.1 -3.5002 | overlap 2139569 GCGCATGCTTCCTCT GCCTG AAT CAGGC TTCCTTGTAGTTGGG Neut_2024 2140366 - 2139707 - | ribonuclease H Neut_2025 2140788 - 2140345 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Neut_2026 2141384 - 2140821 - | outer membrane chaperone Skp (OmpH) TERM 1567 2141102 - 2141118 + g 85 -3.7 -5.42259 | overlap 2141104 AGCGCCGTTCCTCTT CATTGAC AAA GTCAATA TTTTTTTCCAGCTCC TERM 1568 2141104 - 2141116 + g 71 -6.3 -4.35085 | overlap 2141102 CGCCGTTCCTCTTCA TTGAC AAA GTCAA TATTTTTTTCCAGCT TERM 1569 2141373 - 2141383 + g 78 -4 -5.13722 | opp_overlap 2141373 GCTGTATCTATTTAA TGAA TCT TTCA TTTTCTTTTAATACA Neut_2027 2143686 - 2141410 - | surface antigen (D15) TERM 1570 2141796 - 2141783 - G 70 -2.4 -5.03747 | AAATTCTTGAAAAAA GGTA GCGGTT TACC GGAATATCCATCGCC TERM 1571 2142187 - 2142203 + g 70 -10.1 -3.20078 | opp_overlap 2142178, overlap 2142184 ATTAAACACCCCCAC CCTGCTC AGA GAGCGGG TATTGATGTCACGTC TERM 1572 2143505 - 2143515 + g 80 -4.6 -5.21709 | TACAATGCTTTGATC GCCG CAC TGGC TTTTTTACTGTCGAG Neut_2028 2145056 - 2143689 - | putative membrane-associated zinc metalloprotease Neut_2029 2146316 - 2145075 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Neut_2030 2147140 - 2146313 - | phosphatidate cytidylyltransferase TERM 1573 2146517 - 2146532 + g 82 -7.6 -4.65446 | opp_overlap 2146516 CAATAAAGGAACCAG CAAGCT AATC AGCTTG TTTTCTCTATCTACT TERM 1574 2147103 - 2147084 - G 71 -5.7 -4.38141 | gap 1, opp_overlap 2147083, overlap 2147081 2147086 CGGTAGATAAAATAA TG-CCGCC AGAAA GGCGGTCA ATAATATGAGTGCGG Neut_2031 2147966 - 2147175 - | undecaprenyl diphosphate synthase Neut_2032 2148527 - 2147970 - | ribosome recycling factor TERM 1575 2148286 - 2148308 + g 84 -4.9 -5.26316 | TCAGAATCTCGTATC GCTTTTTCA ATGGC TGAAAATGC TTTTTTATCCCATGG pyrH 2149341 - 2148628 - | uridylate kinase tsf 2150776 - 2149892 - | elongation factor Ts TERM 1576 2150688 - 2150701 + g 78 -3.8 -5.16572 | TTCATATCTCCACCA GCCT CGGATA AGGC TTTTTTACATTCCAT rpsB 2151604 - 2150849 - | 30S ribosomal protein S2 Neut_2036 2152547 - 2151819 - | transcriptional regulator, Crp/Fnr family protein TERM 1577 2152008 - 2151997 - G 74 -2.2 -5.07652 | GCTCTCAAAATAAAA TCCG TTGG CGAA TACCCCCGTCTGGCC TERM 1578 2152309 - 2152293 - G 71 -5.1 -4.52589 | overlap 2152297 GCCTGTCATATAAAA GCCAG TCACCTG CTGGC GCCCATCCACCTTCA Neut_2037 2152920 - 2152609 - | cytochrome c, class I Neut_2038 2155170 - 2153158 - | TonB-dependent receptor TERM 1579 2155741 - 2155769 + H 73 -8.9 -3.53811 | opp_overlap 2155741 2155743 CTTACCATCTATACA TATGCGCCATATT CTG ACTCTGGCGCATA TTTACCCGCCATCAC Neut_2039 2155980 - 2156867 + | phosphotransferase domain-containing protein Neut_2040 2156990 - 2157622 + | Sua5/YciO/YrdC/YwlC family protein Neut_2041 2157615 - 2158280 + | peptidase M50 TERM 1580 2159506 - 2159493 - g 70 -4.5 -4.64598 | GAAGGATGTGAAAAA GCCAA TCAA CTGGC AGAAGAAACCATGCG Neut_2042 2158356 - 2159558 + | tryptophanyl-tRNA synthetase Neut_2043 2159558 - 2160403 + | chromosome segregation and condensation protein ScpA Neut_2044 2160369 - 2161019 + | putative transcriptional regulator Neut_2045 2161043 - 2162290 + | isocitrate dehydrogenase, NADP-dependent TERM 1581 2162390 - 2162354 - T 100 -14.4 -3.61244 | overlap 2162350 TATTTCAGAAATCAA CCCCCGGCCTGGCATT ATAAA AACTTCAGGCCGGGGG AAAACTAACCCGAAA Neut_2046 2162632 - 2162429 - | cold-shock DNA-binding domain-containing protein Neut_2047 2163006 - 2163317 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1582 2163955 - 2163939 - g 76 -6.5 -4.56597 | opp_overlap 2163942 TCGTCGCCGCAAAAA CAACCCG CTG CTGGTTG GTGAGGCTGGTGTAG TERM 1583 2164836 - 2164820 - g 73 -5.1 -4.72272 | opp_overlap 2164827 CCGGCGTAGGAAAAA CTGAAGT GGC ACGTCAG CTTGCCTATATACTC TERM 1584 2165363 - 2165347 - g 76 -5.1 -4.87892 | CTGCAAGAAAAGAAA GTGGATG TTA CATTCAC CGACAACCTGCGCAG Neut_2048 2163319 - 2165589 + | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 1585 2166582 - 2166566 - g 71 -6.5 -4.1552 | CAGGTTGCCAACAAA TCACCGG TTG CCCGTGA AGTCATTGAAAGTCA Neut_2049 2165606 - 2166667 + | TRAP dicarboxylate transporter- DctP subunit pyrE 2166695 - 2167423 + | orotate phosphoribosyltransferase Neut_2051 2167618 - 2168694 + | putative sulfonate binding protein precursor Neut_2052 2168699 - 2169535 + | binding-protein-dependent transport systems inner membrane component Neut_2053 2169540 - 2170361 + | ABC transporter-related protein Neut_2054 2170476 - 2173031 + | alpha-glucan phosphorylases fliL 2173344 - 2173826 + | flagellar basal body-associated protein FliL Neut_2056 2173839 - 2174831 + | flagellar motor switch protein FliM Neut_2057 2174860 - 2175333 + | flagellar motor switch protein FliN Neut_2058 2175360 - 2175803 + | flagellar biosynthesis protein, FliO TERM 1586 2176094 - 2176112 + G 74 -9.6 -3.64192 | CGCAGTCATCTCCTC CCAATCAG GTG CTGGTTGG TTTGGCACTGTTTTT fliP 2175793 - 2176578 + | flagellar biosynthesis protein FliP Neut_2060 2176594 - 2176869 + | flagellar biosynthetic protein FliQ TERM 1587 2177015 - 2177031 + G 73 -12.3 -2.58861 | overlap 2177014 GGCTGATTATCCTGA TCTGGCC ACT GGCCAGA ATTCTCGCACTCATG Neut_2061 2176966 - 2177766 + | flagellar biosynthetic protein FliR TERM 1588 2178204 - 2178165 - g 73 -12 -2.66272 | overlap 2178162 2178161 TCGGATTGAAACCGA GGCCCGCGCACGTGTTAC CGCA GAAGCACGTGCGCGGGTA GAAGCCAGTGCTAGA TERM 1589 2178389 - 2178379 - g 79 -5.4 -4.95155 | opp_overlap 2178379 CTTAGAGCAGAAAAA GCAA TCG TTGC TGCTTTGCGTGCCAG TERM 1590 2178527 - 2178508 - g 74 -4.3 -4.8048 | TTGGCAGAGCAAAAA GCAATAG AAGCAG CCATTGC ACGCAGAAAAAACAG TERM 1591 2178555 - 2178540 - g 84 -4.7 -5.28176 | overlap 2178550 TGCACGCAGAAAAAA CAGTG AGGAAG CACTG AAGATAGCGCTTGCC TERM 1592 2178855 - 2178832 - g 72 -4 -4.8667 | gap 1, overlap 2178834 2178853 GATACCCGACAAAAA CT-TGATCTTG CGG CAAAATCAGAG GCAGAGGGCCGCACT Neut_2062 2177926 - 2180022 + | hypothetical protein TERM 1593 2180045 - 2180077 + F 74 -5.5 -4.59773 | opp_overlap 2180045 2180047, overlap 2180047 ACTTAAATATCAAAA TAGCAGCATGATACG CAA TGTATCTAGCTGCAA TTTTTCAGGGTCGGA TERM 1594 2180077 - 2180045 - f 71 -4.8 -4.50358 | opp_overlap 2180045 2180047, overlap 2180047 ACTTAAATATCAAAA TAGCAGCATGATAC GCAAT GTATCTAGCTGCAA TTTTTCAGGGTCGGA Neut_2063 2180128 - 2181564 + | hypothetical protein Neut_2064 2182586 - 2181627 - | alpha/beta hydrolase fold TERM 1595 2181776 - 2181788 + g 78 -6.3 -4.82901 | TGACTGTTTCCGGTG TCAGA ACC TCTGA TTTTTCTCCCCGGAG Neut_2065 2184042 - 2182828 - | argininosuccinate synthase Neut_2066 2185004 - 2184081 - | ornithine carbamoyltransferase Neut_2067 2186361 - 2185180 - | acetylornithine aminotransferase TERM 1596 2186108 - 2186096 - G 87 -4.8 -5.42131 | GAATTACAGAAAAAA GCCT TCTCC AGGC CTGACAGACTGGTCA TERM 1597 2186413 - 2186396 - R 85 -11.3 -3.54488 | overlap 2186394 TGTTCTGAAACAACA TGGTGGC TGGT GCCACCA CTCCTGGGAACAGGT Neut_2068 2187021 - 2186596 - | hypothetical protein Neut_2069 2187292 - 2187047 - | hypothetical protein Neut_2070 2189368 - 2187293 - | hypothetical protein TERM 1598 2189304 - 2189291 - G 83 -3.1 -5.42265 | gap 1, overlap 2189293 2189294 GTAAAGTAGAAAAAA CA-GCC AGA GGCGTG TGGCAAGCCTGCAGA cysM 2190252 - 2189374 - | cysteine synthase B TERM 1599 2190309 - 2190335 + r 93 -15.3 -3.06133 | opp_overlap 2190309 TACACATACAAAAAA CCCCTTGTGAA AGGAA TTCACAAGGGG TTCAGTCAAGGATTA TERM 1600 2190335 - 2190309 - R 100 -15.3 -5.4492 | opp_overlap 2190309 TACACATACAAAAAA CCCCTTGTGAA AGGAA TTCACAAGGGG TTCAGTCAAGGATTA Neut_2072 2193176 - 2190384 - | TPR repeat-containing protein TERM 1601 2190561 - 2190541 - G 83 -14.1 -3.02144 | opp_overlap 2190540 GCAGCTTCCGGAACA GCTGCAACA GCC TGTTGCAGC AAGGAAACCCCTCGT TERM 1602 2191458 - 2191483 + g 71 -7.6 -4.00347 | CTCATCCGGATTTTC CTGACTGGCT TTTTCC AGCCATTCAG TTGCTTTTTCTTTAT TERM 1603 2193786 - 2193800 + H 74 -4.2 -4.94243 | GCGATAAGATATAGT CAGCTT TAT ATGCTG TTTTGATTTTTTTGA Neut_2073 2194555 - 2194839 + | helix-hairpin-helix repeat-containing competence protein ComEA TERM 1604 2194864 - 2194848 - T 71 -3.7 -4.7629 | opp_overlap 2194846 2194848 2194851, overlap 2194851 GCATTAATTTAAAAA TAGTGTC TTA GACATTA TGTTTTAACCTGATG Neut_2074 2196033 - 2195446 - | hypothetical protein Neut_2075 2196677 - 2196105 - | hypothetical protein TERM 1605 2196838 - 2196874 + r 72 -8 -3.97709 | gap 1, opp_overlap 2196838 ATCACAATAAAAAAA CCGGTACA-CCTCTGCC TTGC GACAGGCGATGTACCGG TTCTTATTAACTAAT TERM 1606 2196874 - 2196838 - R 100 -10.2 -5.89921 | gap 1, opp_overlap 2196838 ATCACAATAAAAAAA CCGGTACACC-TCTGCC TTGC GACAGGCGATGTACCGG TTCTTATTAACTAAT Neut_2076 2198178 - 2196913 - | ammonia monooxygenase/methane monooxygenase, subunit B Neut_2077 2199010 - 2198180 - | ammonia monooxygenase/methane monooxygenase, subunit A TERM 1607 2199141 - 2199174 + r 76 -11.1 -3.03124 | opp_overlap 2199141 TTCTTTTTCCATATA CCCCTTGAAATGTAG TTTC CCAGATTTCAAGGGG TATTCCGGACTAAGC TERM 1608 2199174 - 2199141 - R 86 -13.3 -2.87132 | opp_overlap 2199141 TTCTTTTTCCATATA CCCCTTGAAATGTAG TTTC CCAGATTTCAAGGGG TATTCCGGACTAAGC Neut_2078 2199999 - 2199184 - | ammonia monooxygenase/methane monooxygenase, subunit C TERM 1609 2199543 - 2199532 - G 73 -5.8 -4.45517 | opp_overlap 2199531 AAATGATCCATAAAA CACG ACTA CGTG ACTTGGTGTAAAGCT TERM 1610 2199923 - 2199905 - G 73 -9 -3.74519 | overlap 2199894 AACATGGTTATTAAA CCAAATTT ATA AAATTTGG AGTCATACCACAGTG TERM 1611 2200067 - 2200035 - R 74 -7.9 -4.09243 | opp_overlap 2200042, overlap 2200036 2200038 CACATTTTGTTAAAA CCAGTAATGAAAATT AGA ATTTTTCATTACTGT CCATCGCAAATAACC TERM 1612 2200066 - 2200036 - R 79 -11.4 -3.05224 | opp_overlap 2200042, overlap 2200035 2200038 ACATTTTGTTAAAAC CAGTAATGAAAATT AGA ATTTTTCATTACTG TCCATCGCAAATAAC Neut_2079 2201107 - 2200535 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Neut_2080 2202737 - 2201238 - | glycerol kinase Neut_2081 2203201 - 2202788 - | GreA/GreB family elongation factor Neut_2082 2204210 - 2203488 - | two component transcriptional regulator, winged helix family protein TERM 1613 2204728 - 2204708 - R 70 -7.5 -3.91084 | GCACGGGCAAGCAAA CTAGGCCAC CCC GCCGCCTAG CTAGTAGCTACATCC TERM 1614 2205469 - 2205482 + r 74 -3.7 -4.90525 | overlap 2205452 2205470 GGCCAGTACCATTGG TCCGC TTGT GCGGC TTTTCTTTGGGCTTG TERM 1615 2205629 - 2205605 - R 90 -4.3 -5.60689 | gap 1, opp_overlap 2205605 GTAGACAATAAAAAA CCCGCAATGC AAGTAA ACAT-GCGGG TTATCTATATTGTTG Neut_2084 2207065 - 2205818 - | aspartate kinase Neut_2085 2207901 - 2207317 - | peptidoglycan binding domain-containing protein Neut_2086 2208376 - 2209551 + | acetate kinase TERM 1616 2210564 - 2210550 - g 87 -4.2 -5.41143 | GAGCTGGCAAAAAAA CCGGAA CAT CTCCAG CAACTTGAAGCTTGG Neut_2087 2209596 - 2211971 + | putative phosphoketolase Neut_2088 2212305 - 2212195 - | putative integrase Neut_2089 2213646 - 2212552 - | transaldolase TERM 1617 2213799 - 2213815 + H 83 -10.9 -3.63251 | TCGGCTACCTCTTCC TGCGACA ATT TGTCGCA TTCTCATTTCCTGCT Neut_2090 2213893 - 2214402 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1618 2215335 - 2215321 - g 85 -3.5 -5.44119 | overlap 2215322 GTCAGGGTAAAAAAA CTGCC GGACG GGCAA ACCCTGCTGATCGAC Neut_2091 2214409 - 2215371 + | putative FecR Neut_2092 2215450 - 2217747 + | TonB-dependent receptor Neut_2093 2218295 - 2217765 - | hypothetical protein Neut_2094 2218651 - 2218307 - | hypothetical protein Neut_2095 2220009 - 2218627 - | peptidase M24 Neut_2096 2220127 - 2220807 + | ribulose-phosphate 3-epimerase Neut_2097 2220822 - 2221544 + | phosphoglycolate phosphatase TERM 1619 2221611 - 2221565 - f 74 -6.8 -4.30396 | AATGAAACACATAAA GCTATACCGGCTTGTCAC-CGT GATAA ACATGCAACA-GCCGGTATAAC CTCATTCCATCACTT Neut_2098 2221654 - 2223141 + | anthranilate synthase component I Neut_2099 2223604 - 2223176 - | hypothetical protein Neut_2100 2223976 - 2223632 - | hypothetical protein Neut_2101 2224080 - 2224739 + | putative transcriptional regulator TERM 1620 2224736 - 2224725 - f 70 -5.8 -4.31397 | ACCGGCACAAAAGAA TCGC GATC GCGA TAGCCACACTGGCCC Neut_2102 2224848 - 2226029 + | hypothetical protein Neut_2103 2227865 - 2226096 - | dihydrolipoamide dehydrogenase proA 2229138 - 2227870 - | gamma-glutamyl phosphate reductase Neut_2105 2229890 - 2229204 - | TPR repeat-containing protein Neut_2106 2231129 - 2229903 - | hypothetical protein Neut_2107 2232013 - 2231141 - | esterase/lipase/thioesterase family protein TERM 1621 2231677 - 2231664 - G 79 -8.1 -4.39998 | TACGCATAGAACAAA GCAGC CGAG GCTGC GTCACACAACCCCCA Neut_2108 2232864 - 2232010 - | esterase/lipase/thioesterase family protein Neut_2109 2233122 - 2232871 - | hypothetical protein Neut_2110 2233310 - 2234500 + | tetraacyldisaccharide 4'-kinase TERM 1622 2234705 - 2234652 - f 100 -15.5 -3.6239 | opp_overlap 2234661 2234668, overlap 2234654 2234656 2234661 2234668 ATACGTATAAATCAA TATATTTAACGTGAAAGTCCCCATC TAAA GATGGGGACTTTCACGTTATGCCCA GGCGTTAGATTTTGA TERM 1623 2234703 - 2234654 - f 100 -15.9 -3.38317 | opp_overlap 2234661 2234668, overlap 2234652 2234656 2234661 2234668 ACGTATAAATCAATA TATTTAACGTGAAAGTCCCCATC TAAA GATGGGGACTTTCACGTTATGCC CAGGCGTTAGATTTT TERM 1624 2234701 - 2234656 - f 100 -20.7 -3.25317 | opp_overlap 2234661 2234668, overlap 2234654 2234652 2234661 2234668 GTATAAATCAATATA TTTAACGTGAAAGTCCCCATC TAAA GATGGGGACTTTCACGTTATG CCCAGGCGTTAGATT TERM 1625 2234696 - 2234661 - f 100 -25 -3.2029 | opp_overlap 2234661 2234668, overlap 2234656 2234654 2234652 2234668 AATCAATATATTTAA CGTGAAAGTCCCCATC TAAA GATGGGGACTTTCACG TTATGCCCAGGCGTT TERM 1626 2234661 - 2234696 + F 100 -25 -3.29043 | opp_overlap 2234661 2234656 2234654 2234652 2234668, overlap 2234668 AATCAATATATTTAA CGTGAAAGTCCCCATC TAAA GATGGGGACTTTCACG TTATGCCCAGGCGTT TERM 1627 2234689 - 2234668 - f 100 -14.5 -3.67417 | opp_overlap 2234661 2234668, overlap 2234661 2234656 2234654 2234652 ATATTTAACGTGAAA GTCCCCATC TAAA GATGGGGAC TTTCACGTTATGCCC TERM 1628 2234668 - 2234689 + F 100 -14.5 -3.69354 | opp_overlap 2234668 2234661 2234656 2234654 2234652, overlap 2234661 ATATTTAACGTGAAA GTCCCCATC TAAA GATGGGGAC TTTCACGTTATGCCC Neut_2111 2234717 - 2234824 + | putative transposase Neut_2112 2236176 - 2235004 - | glycosyl transferase, group 1 Neut_2113 2237287 - 2236160 - | glycosyl transferase, group 1 Neut_2114 2238292 - 2237288 - | hypothetical protein Neut_2115 2239379 - 2238264 - | glycosyl transferase, group 1 Neut_2116 2240359 - 2239379 - | hypothetical protein Neut_2117 2241667 - 2240426 - | polysaccharide biosynthesis protein TERM 1629 2241203 - 2241166 - G 82 -3.6 -5.24799 | gap 1, opp_overlap 2241178, overlap 2241176 TGATAAATATAAAAA TACCAGC-CAACATCAA GAACT TTGATGTAATGCTGATA ATGGCACTTTGTCGC Neut_2118 2241907 - 2242296 + | protein tyrosine phosphatase TERM 1630 2242326 - 2242300 - f 75 -5.3 -4.75063 | gap 1, overlap 2242315 ACAAAATTGTAAAAA TCTGCCAGAGAA ATAT TTCT-TGACAGA AAACCATCAGCTTCA Neut_2119 2242349 - 2243566 + | polysaccharide export protein TERM 1631 2244794 - 2244784 - g 76 -6.8 -4.45201 | overlap 2244790 2244791 CTTGACAAAAAAATA GGCA AAC TGCC GGAAACCCAGCAAAT TERM 1632 2245640 - 2245660 + G 72 -9.7 -3.36327 | ATTCACCTCCCATCC TGGCCGC TACCGAC GCGGCCA TTATCGGTCGCCTGG Neut_2120 2243620 - 2245863 + | lipopolysaccharide biosynthesis TERM 1633 2246646 - 2246662 + G 70 -10.9 -2.9155 | CTATTTTCTGTTCCT CTGATGG ATA CCATCAG TATCATGTTGCGCCG Neut_2121 2245860 - 2247419 + | glycosyl transferase family protein Neut_2122 2251061 - 2247489 - | chromosome segregation protein SMC TERM 1634 2249866 - 2249879 + g 82 -8.1 -4.58283 | AATTTTTCATTCTGT CTGGC CAAT GCCAG TTTTTCCCGCAATTC TERM 1635 2251131 - 2251121 - H 72 -6.8 -4.15703 | TGTCATAAAGAAGAA CCGA AAA TCGG GAGAACTGAGGAAAC Neut_2123 2251148 - 2251567 + | 7-cyano-7-deazaguanine reductase TERM 1636 2252910 - 2252897 - g 76 -3.1 -5.07107 | gap 1, overlap 2252898 GAAATTGCTAAAAAA GCC-CA TCA TGAGGC ACTAACGTTGAAAGA fumC 2251616 - 2253016 + | fumarate hydratase TERM 1637 2253116 - 2253080 - T 100 -20.5 -5.46629 | opp_overlap 2253080 2253080 AATAGCTGAAAAAAA TTAGGCATCCTGAATTC TTG AAATTCAGGATGCCTAA TATGGTGCACTAAGT TERM 1638 2253080 - 2253116 + T 100 -19.8 -2.79915 | opp_overlap 2253080, overlap 2253080 AATAGCTGAAAAAAA TTAGGCATCCTGAATT CTTGA AATTCAGGATGCCTAA TATGGTGCACTAAGT Neut_2125 2254050 - 2253550 - | hypothetical protein TERM 1639 2254277 - 2254249 - R 74 -11.1 -2.78463 | gap 1 ATGCCTTGCAGCAGA TGCGCCAGAGCG GTGCAT CGCTCTGGCG-A CTCAACCGCCAGACA Neut_2126 2255607 - 2254378 - | diguanylate phosphodiesterase Neut_2127 2256430 - 2255621 - | diguanylate cyclase TERM 1640 2256655 - 2256671 + r 72 -5.9 -4.50627 | opp_overlap 2256625, overlap 2256624 TATAAACATCTGGCA GGATATT AGA GATATCC TTTATTTGATACATA Neut_2128 2259054 - 2256673 - | putative GAF sensor protein TERM 1641 2258802 - 2258822 + g 76 -8.1 -4.25104 | TTGGCAATTTCAGAT CCTGGCAGG AGT CCAGCCCGG TTTTAATACGCGAAA Neut_2129 2259831 - 2259067 - | cyclic-AMP phosphodiesterase Neut_2130 2260345 - 2259920 - | UspA domain-containing protein Neut_2131 2261182 - 2260457 - | integral membrane protein TerC Neut_2132 2262348 - 2261185 - | patatin TERM 1642 2262787 - 2262798 + G 85 -3.6 -5.52384 | TGCTGGTGCCACGCC CGGT CATC GCCG TTTTTTTGATCCGGC TERM 1643 2262808 - 2262824 + G 71 -6.5 -4.20868 | TCGCCGTTTTTTTGA TCCGGCA CAT TACCGGA TTGTTATTTTCGACC TERM 1644 2263056 - 2263072 + G 90 -8 -4.9792 | TTTTTCTTTGTCGCC CCAGTG AAATC CACTGG TTTTTATATGGACTA Neut_2133 2262632 - 2263582 + | proline iminopeptidase Neut_2134 2264285 - 2263602 - | dethiobiotin synthase Neut_2135 2265184 - 2264288 - | biotin biosynthesis protein BioC Neut_2136 2265953 - 2265174 - | bioH protein TERM 1645 2265234 - 2265222 - G 78 -6.2 -4.88786 | AGGAAAAGAAAGAAA CGGC GCGTG GCCG CAATGAGGAAACAGC TERM 1646 2265295 - 2265270 - G 73 -10.5 -3.28712 | TTGCGCCTGGGACAA GTGCTGCTG CGTCCATT CAGCAGCAC CAACAGGCGCGATAA TERM 1647 2265613 - 2265629 + g 70 -10.9 -2.98545 | opp_overlap 2265607, overlap 2265610 2265607 TTGACGAAACAAGGG GTACTGG CAA CCAGTAC TAATTGTTGTACCCG Neut_2137 2267097 - 2265934 - | 8-amino-7-oxononanoate synthase TERM 1648 2266550 - 2266528 - G 70 -9 -3.49668 | overlap 2266516 AAAGCGCTGACACAA CGCCAGCAGC TCG GCAACCGGCG CCCTGTCACCATCCA TERM 1649 2266991 - 2266976 - G 70 -4.6 -4.62069 | TCGTTACTGCAAAAA GCCAGA AAAT CCCGGC CATCAATGGTCACAC Neut_2138 2268119 - 2267103 - | biotin synthase Neut_2139 2268190 - 2268900 + | hypothetical protein TERM 1650 2269139 - 2269176 + G 100 -9.9 -4.8048 | gap 1, opp_overlap 2269137 2269139 CACCGTGCATGAAGA TCTGGCATCCTGCC-TGA GCC TCATGGATGGATGCCGGA TTTTTGCTGTCACCA Neut_2140 2268954 - 2269418 + | RNA methyltransferase Neut_2141 2269505 - 2270035 + | hypothetical protein TERM 1651 2270381 - 2270350 - g 83 -3.1 -5.39221 | gap 1 ACAATAACCAAAAAA TATACT-GTACCGG GTTAT CCGGAACCAATATA TTTACGGAAAACAAC TERM 1652 2270516 - 2270506 - g 71 -6.8 -4.20749 | opp_overlap 2270506 2270505 GAATACGTTAAGAAA GGCT ATA AGCC ATTAATTATTGATTG Neut_2142 2270221 - 2271057 + | methyltransferase FkbM family protein TERM 1653 2271395 - 2271360 - T 77 -3.4 -5.24531 | gap 1 ATGGCGCATAAAAAA TGATCAGGTTAAAGC TCATTAC GCCA-AACCTGATCA TCACTGTCAAACAAT Neut_2143 2272843 - 2271368 - | glucose-6-phosphate 1-dehydrogenase TERM 1654 2271797 - 2271817 + g 71 -6.8 -4.20696 | opp_overlap 2271801 ACGAATCGCAATCAT CGAATGCC GCCTG GGCATACG TTTTCCCGTTCGTAG TERM 1655 2271979 - 2272006 + g 89 -14.2 -3.57144 | CATGTGTATATTGTG CGCGCACTGCAT GTGC ATGCACTGCGCG TTTAGCAATCGGGCG Neut_2144 2273770 - 2272862 - | 6-phosphogluconate dehydrogenase-like protein TERM 1656 2273339 - 2273351 + g 73 -9.1 -3.72576 | ATAGGGTTTCAGGCG TGCCG CGG CGGCA TTTGATCCACCAAAC Neut_2145 2274997 - 2273840 - | ADP-ribosylation/crystallin J1 Neut_2146 2275339 - 2275040 - | hypothetical protein Neut_2147 2275899 - 2275339 - | protein of unknown function YGGT TERM 1657 2275777 - 2275760 - G 72 -3.5 -4.77165 | gap 1 GGCCGTACAATAAAA TCTG-TCA CAG TGACCAGA AATCTTGAAACCGGA Neut_2148 2276784 - 2275972 - | pyrroline-5-carboxylate reductase Neut_2149 2277079 - 2276864 - | hypothetical protein Neut_2150 2277553 - 2277089 - | hypothetical protein Neut_2151 2277890 - 2278024 + | ribosomal protein L34 Neut_2152 2278061 - 2278426 + | ribonuclease P protein component Neut_2153 2278423 - 2278632 + | hypothetical protein Neut_2154 2278723 - 2280591 + | 60 kDa inner membrane insertion protein TERM 1658 2280786 - 2280745 - g 82 -10.4 -3.92373 | gap 2, opp_overlap 2280754, overlap 2280752 2280754 GATTTCAGGGACAAA TCTAGAACAGCTTGCCCAGA CAAT CCTGGGCAAGCT-TCCT-GA TCCACGTCACGCCGG TERM 1659 2280781 - 2280752 - g 83 -12.9 -3.50047 | opp_overlap 2280754, overlap 2280745 2280754 GGGACAAATCTAGAA CAGCTTGCCCAGA CAAT CCTGGGCAAGCTT CCTGATCCACGTCAC TERM 1660 2280779 - 2280754 - g 95 -15.5 -3.31869 | opp_overlap 2280754, overlap 2280752 2280745 GACAAATCTAGAACA GCTTGCCCAGA CAAT CCTGGGCAAGC TTCCTGATCCACGTC TERM 1661 2280754 - 2280779 + G 90 -14.8 -3.21416 | opp_overlap 2280754 2280752 2280745 GACAAATCTAGAACA GCTTGCCCAG ACAATC CTGGGCAAGC TTCCTGATCCACGTC trmE 2280638 - 2282017 + | tRNA modification GTPase TrmE rpsO 2282244 - 2282513 + | 30S ribosomal protein S15 Neut_2157 2282692 - 2284809 + | polynucleotide phosphorylase/polyadenylase TERM 1662 2285122 - 2285155 + F 70 -6.8 -4.07885 | opp_overlap 2285129, overlap 2285124 AGCATCAGCCATATC TTCAACAGGTTTGT TTGTTC ACAATCCTGTTGTA TTTTAGCCAAGCGTA TERM 1663 2285124 - 2285153 + F 77 -9.4 -3.63744 | opp_overlap 2285129, overlap 2285122 CATCAGCCATATCTT CAACAGGTTTGT TTGTTC ACAATCCTGTTG TATTTTAGCCAAGCG Neut_2158 2285378 - 2286772 + | RND efflux system, outer membrane lipoprotein, NodT family protein Neut_2159 2286861 - 2288066 + | RND family efflux transporter MFP subunit Neut_2160 2288084 - 2291278 + | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family protein Neut_2161 2291888 - 2291547 - | hypothetical protein TERM 1664 2291942 - 2291930 - R 73 -9.1 -3.54919 | AATCATCGGCGTAAA CCCGT GTA ACGGG CGGGCATCGGCTGGA Neut_2162 2292657 - 2291917 - | protein of unknown function DUF71, ATP-binding region Neut_2163 2292981 - 2292691 - | hypothetical protein engA 2294729 - 2293323 - | GTP-binding protein EngA TERM 1665 2293363 - 2293373 + g 70 -8.2 -3.73647 | overlap 2293362 CGACGACGACTATGT GCGC GTC GCGC TTCTTCCTCGGTCAA TERM 1666 2294767 - 2294750 - R 71 -4.2 -4.85129 | AGGAGATATGAAAAA TGCTTT ACCCGG AAAGCA TAGAAAAATCCGGTT Neut_2165 2296010 - 2294781 - | Pyrrolo-quinoline quinone Neut_2166 2296651 - 2296013 - | hypothetical protein hisS 2297939 - 2296674 - | histidyl-tRNA synthetase ispG 2299176 - 2297932 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 1667 2298063 - 2298051 - G 83 -9.1 -4.28994 | opp_overlap 2298050 2298049 GACCATCCACGAAAA CCGGT GCC ACCGG AGTTTCACCTGATCC TERM 1668 2298426 - 2298414 - G 73 -5.5 -4.63218 | opp_overlap 2298414, overlap 2298417 2298418 TTCCCTTGAACAAAA GCACC GCC AGTGC TGCTGTCGAAGCAAC Neut_2169 2300286 - 2299210 - | hypothetical protein Neut_2170 2301067 - 2300276 - | type IV pilus biogenesis/stability protein PilW TERM 1669 2300968 - 2300986 + g 76 -6 -4.72272 | overlap 2300969 GCAATGCACGCTGCT TCAATTCC TCA GGAGTTGG TTTTTCCTGAACCGG Neut_2171 2302252 - 2301113 - | radical SAM enzyme, Cfr family protein ndk 2302715 - 2302290 - | nucleoside diphosphate kinase TERM 1670 2302962 - 2302987 + r 100 -13.3 -3.47078 | opp_overlap 2302964, overlap 2302964 CACACGCTCACAAAA AACAGGCCGGA CTAA TCCGGCCTGTG TTCTCATCTACCGTG TERM 1671 2302985 - 2302964 - R 100 -15.9 -5.252 | opp_overlap 2302962 2302964 CACGCTCACAAAAAA CAGGCCGGA CTAA TCCGGCCTG TGTTCTCATCTACCG TERM 1672 2302964 - 2302985 + r 100 -15.9 -3.30651 | opp_overlap 2302964, overlap 2302962 CACGCTCACAAAAAA CAGGCCGGA CTAA TCCGGCCTG TGTTCTCATCTACCG Neut_2173 2303429 - 2303013 - | chain A, red copper protein nitrosocyanin Neut_2174 2303880 - 2305268 + | aminotransferase class-III Neut_2175 2305984 - 2305280 - | DNA polymerase III, epsilon subunit Neut_2176 2306484 - 2305996 - | ribonuclease H Neut_2177 2307251 - 2306544 - | generic methyl-transferase TERM 1673 2307957 - 2307926 - g 76 -3 -5.06816 | ACTGTGGAAGAAAAA CTGAAGCAGAATAT ACCC ACACTCCCCTCCAG TCTGGCTGTCGAAAA Neut_2178 2307338 - 2308105 + | hydroxyacylglutathione hydrolase Neut_2179 2308981 - 2308409 - | hypothetical protein Neut_2180 2310005 - 2309088 - | zinc finger, SWIM-type Neut_2181 2312702 - 2310009 - | SNF2-related protein TERM 1674 2310894 - 2310884 - G 74 -2.4 -5.07107 | TAAACCTGGAAAAAA CACG TTC CGAG CCTAGCAAACCGGGA TERM 1675 2310937 - 2310948 + g 71 -5.8 -4.3739 | opp_overlap 2310927 2310937 2310935 2310944 AAAATCGACCAGAGA TCGG AAAG CCGA TTTTCTACCGGCGTG TERM 1676 2312295 - 2312268 - G 72 -8.4 -3.87815 | CCGTACTTTCAGAAA TTCCGCTAGCGA TAAT CCGCTGGCAGAA CGCTCGCTTTCCAGC TERM 1677 2313224 - 2313211 - H 86 -2.4 -5.75342 | opp_overlap 2313211 GCTGCTGAAAAAAAA TGCA TATTTT TGCA TTTAATTTATTTTCC Neut_2182 2313529 - 2314650 + | NADH:flavin oxidoreductase/NADH oxidase Neut_2183 2314761 - 2315237 + | ornithine cyclodeaminase TERM 1678 2316746 - 2316720 - g 74 -7.9 -4.18197 | AGTCTGCACCGAAAA CGGCTGGTTCG CCGCC CGACCCAGCGG CACAGAAGCCCTGTA Neut_2184 2315272 - 2316843 + | phosphoglucomutase Neut_2185 2316879 - 2317718 + | cation efflux protein TERM 1679 2318298 - 2318313 + G 74 -2.5 -5.08601 | TTTGTAGCCATTGAC CGGAC ATCAAA GTTCG TTTTTGTTCAACTCC Neut_2186 2317875 - 2319005 + | integrase catalytic subunit TERM 1680 2319202 - 2319244 + F 70 -6.5 -4.21773 | gap 1, opp_overlap 2319207 2319217, overlap 2319203 GGGTGTGGCCGTCGA CATGAT-CTTTGAGAACGAA TATT TTCGTTCTCAAAGTATCGAC TTCTTTCTCTTGCCG TERM 1681 2319203 - 2319243 + F 73 -10 -3.12341 | gap 1, opp_overlap 2319207 2319217, overlap 2319202 GGTGTGGCCGTCGAC ATGAT-CTTTGAGAACGAA TATT TTCGTTCTCAAAGTATCGA CTTCTTTCTCTTGCC TERM 1682 2319238 - 2319207 - f 84 -13.2 -2.62184 | opp_overlap 2319203 2319202, overlap 2319217 TGGCCGTCGACATGA TCTTTGAGAACGAA TATT TTCGTTCTCAAAGT ATCGACTTCTTTCTC Neut_2187 2319470 - 2320414 + | putative agmatinase Neut_2188 2320426 - 2322384 + | arginine decarboxylase Neut_2189 2322744 - 2322376 - | transposase and inactivated derivatives Neut_2190 2323192 - 2322899 - | transposase IS3/IS911 family protein Neut_2191 2323715 - 2323254 - | hypothetical protein TERM 1683 2324050 - 2324036 - R 76 -10 -3.35695 | overlap 2324031 TGGACACAAAGTTAA GCAGCA TTT TGCTGC AACTCGAAATCAACG Neut_2192 2324853 - 2324032 - | integrase catalytic subunit TERM 1684 2324707 - 2324723 + g 85 -3.6 -5.49729 | overlap 2324699 2324695 TTTGAGACGGCGGGT GCCGTA TGTAT TCCGGC TTTTTTTAAATAATT Neut_2193 2325014 - 2324892 - | hypothetical protein Neut_2194 2325086 - 2325382 + | transposase IS3/IS911 family protein TERM 1685 2325423 - 2325411 - f 93 -4.8 -5.48213 | opp_overlap 2325411 2325421, overlap 2325413 CACCCAAAAGAAAAA GACC TACCC GGTC GGCCTGATGTGCCGG Neut_2195 2325430 - 2326257 + | integrase catalytic subunit TERM 1686 2326383 - 2326371 - f 72 -7.7 -3.86346 | CCATCTTTCCATAAA TGAGC TGT GCTCA AACGAACGCGTAACT TERM 1687 2327149 - 2327159 + G 87 -8.2 -4.7497 | TGTCCCATTACCAGG GGCC GGT GGCC TTTTTGCTGGCTGGA Neut_2196 2326581 - 2327354 + | hypothetical protein TERM 1688 2328105 - 2328120 + G 74 -2.5 -5.08601 | TTTGTAGCCATTGAC CGGAC ATCAAA GTTCG TTTTTGTTCAACTCC Neut_2197 2327682 - 2328602 + | integrase catalytic subunit Neut_2198 2329080 - 2328610 - | transposase, IS4 family protein Neut_2200 2329886 - 2329521 - | putative transposase Neut_2201 2331212 - 2329905 - | metal dependent phosphohydrolase TERM 1689 2331408 - 2331436 + r 85 -13.3 -2.70275 | opp_overlap 2331435, overlap 2331406 2331410 2331429 2331432 2331435 GAGGTGTATCTGCTA GATTCTTCAGCTC CAT GAGCTCAAGAATC TCATCTATGAGATTG TERM 1690 2331410 - 2331434 + r 72 -10.1 -2.89177 | overlap 2331408 2331406 2331429 2331432 GGTGTATCTGCTAGA TTCTTCAGCTC CAT GAGCTCAAGAA TCTCATCTATGAGAT TERM 1691 2331429 - 2331454 + r 100 -3.3 -5.86609 | opp_overlap 2331435, overlap 2331410 2331408 2331406 2331432 2331435 TCAGCTCCATGAGCT CAAGAATCTCA TCTA TGAGATTGCTG TTTTTCTTTTTTTGG Neut_2203 2332333 - 2331842 - | pseudouridine synthase, Rsu Neut_2204 2334579 - 2332864 - | hypothetical protein TERM 1692 2333348 - 2333327 - G 79 -8.7 -4.25848 | overlap 2333328 AACGTCGCATGAAAA GTGCCAAGC CCAA GCTTGGCAG CCCACATCTTCTCCA TERM 1693 2333347 - 2333328 - G 77 -12.2 -3.15027 | overlap 2333327 ACGTCGCATGAAAAG TGCCAAGC CCAA GCTTGGCA GCCCACATCTTCTCC Neut_2205 2334854 - 2334576 - | hypothetical protein TERM 1694 2335040 - 2335001 - R 87 -5.7 -5.45652 | overlap 2334981 2335002 ACGCTCAATAAAAAA GCATGGAGCTCACCAAG TAAACT CTATGTAAACCCCATGC CTTTAAAATTAATAT Neut_2206 2335724 - 2335254 - | transposase, IS4 family protein Neut_2208 2336123 - 2336668 + | GCN5-related N-acetyltransferase Neut_2210 2336993 - 2337463 + | transposase, IS4 family protein Neut_2211 2338228 - 2337584 - | multiple antibiotic resistance (MarC)-related proteins Neut_2212 2338530 - 2338321 - | GCN5-related N-acetyltransferase TERM 1695 2338994 - 2338984 - H 71 -8.2 -3.72695 | overlap 2338985 ACCCGCTTGAGCAAA CGCG CAG CGCG GCCCCCTCGGTGCGC TERM 1696 2339009 - 2338985 - H 77 -11.3 -2.83403 | overlap 2338984 CCCGCTTGAGCAAAC GCGCAGCGCGG CCC CCTCGGTGCGC CGGCCAAATCCGAGT Neut_2213 2339313 - 2340254 + | ornithine cyclodeaminase TERM 1697 2340951 - 2340905 - g 73 -12.3 -2.63596 | gap 1, opp_overlap 2340912 CCGGATCGTATACCA TGGCACTGTGCGCGGGTGCTGC CGTT GCAGCAGCCG-GCACTTTACCA CTCACCCAATCGCTG TERM 1698 2340912 - 2340944 + G 89 -14.2 -3.57144 | gap 1, opp_overlap 2340905 GTATACCATGGCACT GTGCGCGGGTGCTGC CGTT GCAGCAGCCG-GCAC TTTACCACTCACCCA TERM 1699 2341338 - 2341314 - g 75 -10.8 -3.36785 | opp_overlap 2341333 CCAGAGCCTAATCAA TGCAGCAATG GCGCT CACTGCTGCA ATCGGCTTTCTGGGA Neut_2214 2340517 - 2341686 + | major facilitator transporter TERM 1700 2342849 - 2342862 + F 76 -3.8 -5.06585 | overlap 2342843 TTTCCAAGGGAACAG GCAG ATATTA CTGC TTTTTCTGTCCTTTC TERM 1701 2343042 - 2343053 + F 73 -3 -5.10064 | opp_overlap 2343031, overlap 2343031 TGCACTCCGTTCTGC TTAC CGGA GTAA TTTTTATATGTTCGA TERM 1702 2343190 - 2343202 + G 76 -3.4 -5.19819 | CCAGAAGGCAGGGTA TCCA TAGAC TGGA TTTTTGATTTTATTT Neut_2215 2343061 - 2343993 + | hypothetical protein TERM 1703 2344339 - 2344328 - g 71 -7.2 -4.0031 | AGTTTCACGAAAGAA CCGG TCAG CCGG TTAACGGTGATCTCG TERM 1704 2344750 - 2344762 + G 70 -4.7 -4.72272 | overlap 2344751 CCCCTGCGGGCGCTC GGGCC GGA GGCCA TTTTTCCTGACAAAC TERM 1705 2344798 - 2344777 - g 78 -10.1 -3.85817 | ATTTTTCCTGACAAA CGTGCGGCT GTTG AGCCGGACG GAGATAAATCAGCAC TERM 1706 2345060 - 2345048 - g 73 -9.1 -3.78775 | overlap 2345057 GCTGGCACGAGGAAA CCGGT AAT ACCGG TGCCGATGCACTGGC Neut_2216 2344216 - 2346834 + | CRISPR-associated Csm1 family protein TERM 1707 2346843 - 2346872 + F 73 -6.3 -4.30719 | opp_overlap 2346835 2346833 2346841 2346842, overlap 2346845 ACAATGACGACAAGC TTGCCGCCCGG CAATCAAA CCGGGCAGCCA TTTATTATCAACACC Neut_2217 2346917 - 2347288 + | CRISPR-associated Csm2 family protein Neut_2218 2347341 - 2348057 + | CRISPR-associated RAMP Csm3 family protein Neut_2219 2348062 - 2349030 + | hypothetical protein TERM 1708 2349688 - 2349675 - g 72 -3.7 -4.78157 | AGCAAAAAGAAGAAA CCGAG CGAG CGCGG CAGTTCACCTGAACT TERM 1709 2350087 - 2350068 - g 70 -4.2 -4.68994 | overlap 2350085 ACCACTACCGAAAAA CGCTTTGC CAGT ACAACGCG CGCAGCGACCAGTCA TERM 1710 2350615 - 2350601 - g 78 -5.7 -4.7629 | GGAGGAACGTAAAAA GCTGA AGTTG TCAGC CTTACGCCTCTAAAT Neut_2220 2349027 - 2350628 + | CRISPR-associated RAMP Csm5 family protein Neut_2221 2350651 - 2351607 + | hypothetical protein Neut_2222 2351604 - 2351900 + | putative CRISPR-associated VVA1548 family protein Neut_2223 2351897 - 2353066 + | CRISPR-associated TM1812 family protein Neut_2224 2353155 - 2353370 + | hypothetical protein Neut_2225 2353563 - 2354693 + | CRISPR-associated NE0113 family protein Neut_2226 2354890 - 2354720 - | putative CcdB-like protein Neut_2227 2355216 - 2355121 - | hypothetical protein Neut_2228 2355572 - 2355859 + | CRISPR-associated Cas2 family protein TERM 1711 2355978 - 2355994 + G 70 -2.9 -4.88736 | overlap 2355978 2355979 TGGCACGGTGCCCAT TGCGC CACTGAC GCGCG TTTTTCTGCGTGGTG TERM 1712 2356693 - 2356681 - g 70 -9.1 -3.54475 | TTTTCGACGACAGAA GCAGG TTG CCTGC TTGGCAAGGCTGGCC Neut_2229 2355877 - 2356863 + | CRISPR-associated Cas1 family protein Neut_2230 2356872 - 2357156 + | CRISPR-associated Cas2 family protein TERM 1713 2357405 - 2357394 - T 80 -4.4 -5.19879 | TTGTAAAGAGAAAAA TGAC AGTA GTCA GAAACACCCATGCCC Neut_2231 2357837 - 2357538 - | hypothetical protein TERM 1714 2358465 - 2358483 + H 71 -9 -3.41024 | opp_overlap 2358465, overlap 2358463 CAGAATTACGCAGAA GTCTTTTT GTA AAAAAGAC TGTTATCTTGGACAA TERM 1715 2358483 - 2358465 - H 71 -9 -3.40309 | opp_overlap 2358465 2358463 CAGAATTACGCAGAA GTCTTTTT GTA AAAAAGAC TGTTATCTTGGACAA Neut_2232 2358511 - 2359149 + | hypothetical protein Neut_2233 2359336 - 2359806 + | hypothetical protein Neut_2234 2361166 - 2360030 - | succinyl-diaminopimelate desuccinylase Neut_2235 2361997 - 2361215 - | ABC transporter-related protein Neut_2236 2363142 - 2361997 - | hypothetical protein TERM 1716 2362047 - 2362031 - G 70 -4.4 -4.64766 | CCGATACTGGAAAAA GCCACT GCAAA AATGGC ATCAATGATGATCAC Neut_2237 2364048 - 2363167 - | prolipoprotein diacylglyceryl transferase Neut_2238 2364136 - 2365809 + | dihydroxy-acid dehydratase TERM 1717 2366678 - 2366713 + G 70 -9 -3.61398 | opp_overlap 2366678 2366690 2366691 2366710 CCCTCTATGCAGAAA CCTGGTTGATAACCGG CAAC CCGCTTTTCAAACAGG TTGTTGAAGAAACAG TERM 1718 2366713 - 2366678 - g 75 -9 -3.91897 | opp_overlap 2366678, overlap 2366690 2366691 2366710 CCCTCTATGCAGAAA CCTGGTTGATAACCGG CAAC CCGCTTTTCAAACAGG TTGTTGAAGAAACAG Neut_2240 2366155 - 2366754 + | hypothetical protein Neut_2241 2366947 - 2367897 + | hypothetical protein Neut_2242 2367921 - 2368232 + | cytochrome c, class I TERM 1719 2368280 - 2368257 - f 85 -11.8 -3.33711 | gap 1, opp_overlap 2368257, overlap 2368252 CAGCTATAAATTTAA GCCGATACCGG GAA CCG-TATCGGC TTTTTTGTTTCCGGG TERM 1720 2368257 - 2368280 + F 100 -11.8 -5.63517 | gap 1, opp_overlap 2368257 2368252 CAGCTATAAATTTAA GCCGATACCGG GAA CCG-TATCGGC TTTTTTGTTTCCGGG Neut_2243 2368402 - 2369370 + | glycerate dehydrogenase Neut_2244 2369448 - 2369993 + | dTDP-4-dehydrorhamnose 3,5-epimerase Neut_2245 2370098 - 2371369 + | major facilitator transporter TERM 1721 2371619 - 2371629 + G 76 -6.8 -4.46073 | overlap 2371627 CAAGCTTTGATTTAT CCAG AGA CTGG TTTCTTCTGTTAGAG Neut_2246 2371522 - 2372595 + | hypothetical protein Neut_2247 2372758 - 2373423 + | hypothetical protein Neut_2248 2373560 - 2374225 + | HAD family hydrolase Neut_2249 2374271 - 2374636 + | hypothetical protein TERM 1722 2374726 - 2374740 + F 84 -8.6 -4.37886 | ACAATACAGCTGGTT CCGATA TAA TATCGG TTTTGTGAAGGATCG TERM 1723 2375031 - 2375019 - g 79 -7.7 -4.48987 | GTTGCACAAGTAAAA CGCTT CGA AAGCG GCATTGTCACTGATC Neut_2250 2374761 - 2376224 + | inosine-5'-monophosphate dehydrogenase guaA 2376237 - 2377796 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1724 2377845 - 2377862 + F 100 -10.5 -6.28967 | ATGAAATGCCGCTAA GCCCGCG TAAT TGCGGGC TTTTTTTTGTTTGTG Neut_2252 2378101 - 2379303 + | phage integrase family protein Neut_2253 2379451 - 2379672 + | phage transcriptional regulator, AlpA TERM 1725 2379653 - 2379672 + F 77 -10 -3.5518 | ATCAAGCTGCGCGAC CTGGCCCT ATAG AGGGCTAG TTATATGGCTCTTGA Neut_2254 2379677 - 2380504 + | putative DNA helicase Neut_2255 2380491 - 2381372 + | replication C family protein TERM 1726 2381502 - 2381518 + F 83 -11.5 -3.36492 | ATGCGCGGTGCAGCT CGCGCCT TGA GGGCGCG TTCTGACCTTGCCAA TERM 1727 2381538 - 2381549 + F 70 -7.2 -3.91897 | opp_overlap 2381538 GACCTTGCCAATAAA GCCC TGGC GGGC TTTATCAATCGGCCA TERM 1728 2381549 - 2381538 - f 74 -7.2 -4.1552 | opp_overlap 2381538 GACCTTGCCAATAAA GCCC TGGC GGGC TTTATCAATCGGCCA TERM 1729 2381555 - 2381575 + F 81 -11.1 -3.53012 | opp_overlap 2381558, overlap 2381558 CCTGGCGGGCTTTAT CAATCGGCC ATA GGCCGATGG TTTAACGCCAAGAAG TERM 1730 2381558 - 2381572 + F 78 -11.4 -2.90496 | opp_overlap 2381558, overlap 2381555 GGCGGGCTTTATCAA TCGGCC ATA GGCCGA TGGTTTAACGCCAAG TERM 1731 2381572 - 2381558 - f 81 -11.4 -3.14132 | opp_overlap 2381558 2381555 GGCGGGCTTTATCAA TCGGCC ATA GGCCGA TGGTTTAACGCCAAG TERM 1732 2381779 - 2381807 + F 75 -9.2 -3.61398 | opp_overlap 2381785 2381788, overlap 2381782 2381785 TGCCCATTCGTTCGG TAAGAATAATAA GAAGA TTATTATTCTTA TTATTACCAAGCAGG TERM 1733 2381966 - 2381986 + F 84 -6.8 -5.0538 | TGTTCATTGACACTT GAGGGGCG GGTTA TGCCCTTC TTTTTTGGCGTCCAA TERM 1734 2381999 - 2382023 + F 81 -9.9 -4.10781 | overlap 2382002 TTCTTTTTTGGCGTC CAACTCGCCCC ATC GGGGCGAATGG TTTGTGTCGATTGTT TERM 1735 2382002 - 2382020 + F 73 -10.2 -3.07534 | overlap 2381999 TTTTTTGGCGTCCAA CTCGCCCC ATC GGGGCGAA TGGTTTGTGTCGATT TERM 1736 2382215 - 2382267 + F 78 -10 -3.61398 | gap 1, opp_overlap 2382231 2382236, overlap 2382216 2382229 2382236 GGGTGAAATGCGGGC AGGATGGGTGAAGTTAGCTAACCGG CAAG CCGGTTATCTATCTTCACT-GTCCC TTATTCGCGCCGGGG TERM 1737 2382216 - 2382266 + F 86 -13.5 -2.76696 | gap 1, opp_overlap 2382231 2382236, overlap 2382215 2382229 2382236 GGTGAAATGCGGGCA GGATGGGTGAAGTTAGCTAACCGG CAAG CCGGTTATCTATCTTCACT-GTCC CTTATTCGCGCCGGG TERM 1738 2382229 - 2382254 + F 74 -10.5 -3.13071 | opp_overlap 2382231 2382236, overlap 2382216 2382215 2382236 CAGGATGGGTGAAGT TAGCTAACCGG CAAG CCGGTTATCTA TCTTCACTGTCCCTT Neut_2256 2382405 - 2382593 + | putative stabilization protein Neut_2257 2382734 - 2383513 + | putative mating pair formation protein Neut_2533a 2383526 - 2383762 + | hypothetical protein Neut_2258 2383773 - 2385200 + | TrbL/VirB6 plasmid conjugal transfer protein TERM 1739 2385247 - 2385218 - g 79 -12.1 -3.30443 | CGATGACGACATCAA CATACATGGCCGC ATTG GCGGCCCTGGATG AAGCGCCAAGGGAAG Neut_2259 2385205 - 2385453 + | hypothetical protein TERM 1740 2385456 - 2385485 + F 83 -10.6 -3.64822 | GCTGTACCTGTAGGC GCACCGGGCTGG CCACAA CCAGCCCGGCAC TTTCAATCAACACCT Neut_2260 2385517 - 2385741 + | hypothetical protein TERM 1741 2385774 - 2385750 - T 79 -9.9 -3.84961 | opp_overlap 2385751, overlap 2385751 CAGCTAATGACGAAA GGGCGGCCACT CGA ACTGGCCGCCT TTTTCAATCTTCACT TERM 1742 2385773 - 2385751 - T 86 -13.4 -2.90494 | opp_overlap 2385751, overlap 2385750 AGCTAATGACGAAAG GGCGGCCACT CGA ACTGGCCGCC TTTTTCAATCTTCAC TERM 1743 2385751 - 2385773 + T 100 -13.4 -4.74706 | opp_overlap 2385751 2385750 AGCTAATGACGAAAG GGCGGCCACT CGA ACTGGCCGCC TTTTTCAATCTTCAC TERM 1744 2385928 - 2385940 + T 76 -10.5 -3.4072 | opp_overlap 2385921 AGTGGAAACGGCGCG GGCCG GGT CGGCC TTCTCATGCAGCCTG Neut_2261 2387163 - 2386096 - | bile acid:sodium symporter Neut_2262 2387666 - 2387160 - | protein tyrosine phosphatase Neut_2263 2388430 - 2387663 - | NADPH-dependent FMN reductase TERM 1745 2387718 - 2387749 + g 70 -8.6 -3.75629 | gap 1, opp_overlap 2387716 2387718 2387719, overlap 2387719 2387746 GCGATGGATGAAAGA TCGG-TGGCCTCGTC GAT GACGTGGCCGGCCGC TTTCCGTTCGGAATA TERM 1746 2387719 - 2387748 + g 74 -12.1 -2.85056 | gap 1, opp_overlap 2387718 2387716 2387719, overlap 2387718 2387746 CGATGGATGAAAGAT CGG-TGGCCTCGTC GAT GACGTGGCCGGCCG CTTTCCGTTCGGAAT TERM 1747 2387770 - 2387818 + g 73 -8.9 -3.68073 | GTTCGGAATAGCGGT CTGTCAGTGCTTCACGGTGC-GG CCGTA CCAGCGCCGTGAAGCGCAC-CAG TTCTTCCATCACATC TERM 1748 2388029 - 2388045 + g 70 -9.3 -3.53091 | overlap 2388030 GGTGCGGCCTTGGGT CGGCCGG ATG CCGGCCA TTTCAAGCGGCAGAT TERM 1749 2388030 - 2388044 + g 77 -12.8 -2.71712 | overlap 2388029 GTGCGGCCTTGGGTC GGCCGG ATG CCGGCC ATTTCAAGCGGCAGA Neut_2264 2388759 - 2388427 - | transcriptional regulator, ArsR family protein TERM 1750 2388523 - 2388505 - G 84 -11 -3.85698 | GTTTTCCGTGAGAAA GGCCACCA GGT TAGTGGCC GTCGAAAAGTTCGCC TERM 1751 2388612 - 2388647 + g 91 -10.4 -4.56597 | gap 1, opp_overlap 2388615 2388620 2388622, overlap 2388613 2388615 CTTTCAGGTGGAAGG ATAGCGAAGACGGCGGG ATG CCGGCCG-CTTCGCTGA TTTTTCCGGCGGCCA TERM 1752 2388613 - 2388646 + g 83 -13.9 -3.33744 | gap 1, opp_overlap 2388615 2388620 2388622, overlap 2388612 2388615 TTTCAGGTGGAAGGA TAGCGAAGACGGCGGG ATG CCGGCCG-CTTCGCTG ATTTTTCCGGCGGCC TERM 1753 2388644 - 2388615 - G 83 -14.3 -2.90723 | gap 1, opp_overlap 2388613 2388612 2388615, overlap 2388620 2388622 TCAGGTGGAAGGATA GCGAAGACGGCGGG ATG CCGGCCG-CTTCGC TGATTTTTCCGGCGG TERM 1754 2388615 - 2388644 + g 86 -14.3 -3.23708 | gap 1, opp_overlap 2388615 2388620 2388622, overlap 2388613 2388612 TCAGGTGGAAGGATA GCGAAGACGGCGGG ATG CCGGCCG-CTTCGC TGATTTTTCCGGCGG Neut_2265 2388907 - 2389644 + | resolvase domain-containing protein Neut_2266 2389641 - 2389865 + | hypothetical protein TERM 1755 2390013 - 2390030 + TF 100 -10.5 -5.59879 | ATAAAAAGCCGCCAA GCCCGCG TAAT TGCGGGC TTTTTTGTATTTGTG Neut_2268 2391804 - 2390485 - | integrase catalytic subunit Neut_2267 2390135 - 2390572 + | hypothetical protein TERM 1756 2391381 - 2391366 - Gf 74 -2.5 -5.08601 | GGAGTTGAACAAAAA CGAAC TTTGAT GTCCG GTCAATGGCTACAAA TERM 1757 2393017 - 2393038 + G 95 -12.3 -4.24123 | TTGGCCGTCGCCGCG CTGCCGGAG GAGT TTCCGGCAG TTTTCACCTTCTTCC TERM 1758 2393777 - 2393793 + G 71 -6.5 -4.1552 | AGGTGGAGAACCGTC TGCGGGA AGA TCCCGGA TTTCTTCACGGCGTA Neut_2269 2392180 - 2394669 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC Neut_2270 2394742 - 2395134 + | putative insertion sequence transposase protein TERM 1759 2395210 - 2395254 + G 74 -11.4 -3.05384 | opp_overlap 2395207 2395209 2395212, overlap 2395215 AACGACCACCAACAT GACGCGACAGCG-AGGTCGCGC GTC GCGCGGCCAGCGCTGT-GTGGC TTCGGTGCCCCACGG TERM 1760 2395215 - 2395250 + G 73 -11.8 -2.54896 | gap 1, opp_overlap 2395207 2395212 2395209, overlap 2395210 CCACCAACATGACGC GACAGCG-AGGTCGCGC GTC GCGCGGCCAGCGCTGTG TGGCTTCGGTGCCCC Neut_2271 2395208 - 2395666 + | ISRm2011-2 transposase protein TERM 1761 2396009 - 2396024 + G 70 -10.4 -2.95126 | overlap 2396006 TGCGGCGATACTTTT GCGCTG GATG CAGCGC TGCTTTCCGATTGTA Neut_2272 2395688 - 2396350 + | thiopurine S-methyltransferase Neut_2273 2396574 - 2398754 + | hypothetical protein TERM 1762 2398945 - 2398927 - f 72 -9.6 -3.14587 | overlap 2398925 2398922 TTTTACAAAACTACA GCATCACC CAG GATGATGC GAGCGCCTCTACCAA TERM 1763 2399831 - 2399819 - g 70 -9.1 -3.55444 | TGGGCACTGGTCAAA CTGGC GCG GCCAG TCATCAGCGGTTTAC Neut_2274 2398976 - 2401006 + | oligopeptide transporter, OPT family protein Neut_2275 2402485 - 2401103 - | hypothetical protein Neut_2276 2403643 - 2402552 - | hypothetical protein TERM 1764 2403444 - 2403427 - G 70 -2.7 -4.84359 | overlap 2403412 TCATGGTGATAAAAA TACCGAT TGCC ATCAGCA TGACAAAAACGGTAC TERM 1765 2403625 - 2403615 - G 80 -2.4 -5.38321 | AAATACCAGAAAAAA CGGG AAT CCGG GGAATATTTGTTGTC Neut_2277 2403703 - 2404761 + | phosphoribosylaminoimidazole synthetase Neut_2278 2404773 - 2405405 + | phosphoribosylglycinamide formyltransferase Neut_2279 2405402 - 2406124 + | hypothetical protein Neut_2280 2406141 - 2407415 + | Fmu (Sun) domain-containing protein TERM 1766 2407440 - 2407419 - T 100 -11.6 -5.18355 | CCCAAAAATTAAAAA GGGGCCTT AGAGAA AAGGCCCC TTCAGAATGCAAGCA TERM 1767 2407478 - 2407448 - T 85 -12.1 -3.29043 | gap 1 AAGGCCCCTTCAGAA TGCAAGCAGCTAAC TTGA GTTA-CTGCTTGCA GAAATTAATTATTAT Neut_2281 2407732 - 2407496 - | thioredoxin Neut_2282 2408450 - 2407902 - | proline-rich region Neut_2283 2408986 - 2408465 - | proline-rich region TERM 1768 2409447 - 2409461 + G 76 -7.2 -4.35461 | overlap 2409459 ACGGGGTGGAGACTG TGATCA ACC TGATCA TTTTCATGATATTAA TERM 1769 2409598 - 2409623 + G 73 -3.1 -4.93898 | opp_overlap 2409586, overlap 2409599 2409621 AATCACCGGCAGCCT GCGCAATGTCC TATT GGCCATCGCGA TTTTTATCGTAATCT TERM 1770 2409696 - 2409721 + G 74 -3.9 -5.00895 | overlap 2409689 2409691 TGGGGCCTCTGCTGG CGGCAGCTTAT TTGA ATCAGCGGCTG TTTTTCTATGATGCG Neut_2284 2409215 - 2409934 + | putative transmembrane protein TERM 1771 2410519 - 2410507 - g 71 -5.5 -4.56597 | overlap 2410508 CTGTTTTGTGAAAAA GCAGC TGC ACTGC TGTCAAACAACGCTG Neut_2285 2410030 - 2411754 + | response regulator receiver modulated diguanylate cyclase/phosphodiesterase TERM 1772 2411781 - 2411767 - f 77 -11.4 -2.62933 | overlap 2411755 TAACTTTGCACAGTA TGGCGG TCA CCGCCA CATGCATGAAGATGA Neut_2286 2411967 - 2412425 + | peptidylprolyl isomerase, FKBP-type TERM 1773 2412502 - 2412517 + T 75 -9 -3.61646 | overlap 2412511 CTTCCTTTGTTTACC TCCCTC CAGG GAGGGA TTCCTTTATGCACTT Neut_2287 2413426 - 2412497 - | ribosome small subunit-dependent GTPase A TERM 1774 2413368 - 2413350 - G 71 -6.6 -4.13767 | overlap 2413353 GTTTCGACTTCAAAA TGACGGCC ATA GGCCGCTA CTACCCTGCCGAGCA TERM 1775 2413365 - 2413353 - G 71 -10.5 -3.09831 | overlap 2413350 TCGACTTCAAAATGA CGGCC ATA GGCCG CTACTACCCTGCCGA phhB 2413764 - 2413423 - | pterin-4-alpha-carbinolamine dehydratase Neut_2289 2415029 - 2413761 - | Ste24 endopeptidase TERM 1776 2414825 - 2414849 + g 74 -8.6 -4.09243 | AACCTGTGTTGAGCA GTATGCCTGG ATAAC TCAGGCGTAC TTTTGCACAGGTATA Neut_2290 2415186 - 2415731 + | oligoribonuclease Neut_2291 2415767 - 2418322 + | alpha-glucan phosphorylases Neut_2292 2419179 - 2418346 - | pantoate--beta-alanine ligase TERM 1777 2418460 - 2418419 - G 100 -20.4 -3.84648 | opp_overlap 2418422 2418425, overlap 2418420 2418422 CCCAATATGACCAAA CCAGAATCGCACGCTGTT GCCGGT AACAGCGTGCGATTCTGT CGTACCGAAATATAG TERM 1778 2418459 - 2418420 - G 100 -23.9 -2.90307 | opp_overlap 2418422 2418425, overlap 2418419 2418422 CCAATATGACCAAAC CAGAATCGCACGCTGTT GCCGGT AACAGCGTGCGATTCTG TCGTACCGAAATATA TERM 1779 2418457 - 2418422 - G 100 -20.7 -2.99609 | opp_overlap 2418422 2418425, overlap 2418420 2418419 AATATGACCAAACCA GAATCGCACGCTGTT GCCGGT AACAGCGTGCGATTC TGTCGTACCGAAATA TERM 1780 2418422 - 2418457 + g 100 -21.4 -2.78596 | opp_overlap 2418422 2418420 2418419, overlap 2418425 AATATGACCAAACCA GAATCGCACGCTGTTG CCGG TAACAGCGTGCGATTC TGTCGTACCGAAATA TERM 1781 2418425 - 2418454 + g 100 -17.3 -3.54475 | opp_overlap 2418422 2418420 2418419, overlap 2418422 ATGACCAAACCAGAA TCGCACGCTGTTG CCGG TAACAGCGTGCGA TTCTGTCGTACCGAA TERM 1782 2418716 - 2418732 + g 73 -10.9 -3.25304 | opp_overlap 2418714 2418711, overlap 2418708 AGTTGAGCAACCATC CTGCAGA TAA TCTGCAG TTGCTGGTAGTCTTT Neut_2293 2420012 - 2419203 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 1783 2419517 - 2419528 + g 71 -5.8 -4.30448 | CCAGCAATTGTCTGG CACC ATCA GGTG TTTTCCCTTGAATTT Neut_2294 2420660 - 2420016 - | deoxynucleoside kinase TERM 1784 2420488 - 2420478 - G 100 -5.4 -5.86061 | CTGGAGCAAAAAAAA CAAC TGG GTTG ACAAGGCATATCTGG Neut_2295 2421169 - 2420657 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Neut_2296 2422554 - 2421166 - | poly(A) polymerase Neut_2297 2423865 - 2422708 - | phospholipase D/transphosphatidylase Neut_2298 2424623 - 2423862 - | endonuclease/exonuclease/phosphatase Neut_2299 2425795 - 2424695 - | quinolinate synthetase Neut_2300 2426085 - 2426666 + | hypothetical protein Neut_2301 2426736 - 2427287 + | OstA family protein Neut_2302 2427339 - 2428061 + | ABC transporter-related protein Neut_2303 2428067 - 2429530 + | RNA polymerase, sigma 54 subunit, RpoN Neut_2304 2429705 - 2430040 + | sigma 54 modulation protein/ribosomal protein S30EA Neut_2305 2430281 - 2430751 + | putative PTS IIA-like nitrogen-regulatory protein PtsN Neut_2306 2430738 - 2431709 + | HPr kinase/phosphorylase TERM 1785 2431922 - 2431911 - g 76 -3 -5.10933 | TGAGCGAAAAGAAAA CAAT TACG ATTG CCTTGACTGGCGCAT Neut_2307 2431895 - 2432509 + | aromatic acid decarboxylase Neut_2308 2433199 - 2432561 - | 5-formyltetrahydrofolate cyclo-ligase TERM 1786 2433067 - 2433042 - G 76 -3.3 -5.06414 | gap 1 TGCGGCCAATAAAAA CCAATCCGCTGA TTC TCAA-GGATAGG AAAGCCTTGTGTCAG Neut_2309 2434322 - 2433192 - | A/G-specific adenine glycosylase TERM 1787 2433920 - 2433904 - G 74 -6.5 -4.37711 | overlap 2433911 2433912 TTACCAAATGCAAAA GCAGCAA TGG CCGCTGC GGTAGAACGGCCTAT Neut_2310 2434889 - 2434344 - | intracellular septation protein A TERM 1788 2434695 - 2434675 - G 76 -6.2 -4.67982 | gap 1, overlap 2434676 2434677 TTCCATTTAATAAAA GTCTCATCC TGCA GGATGAG-C GTTGCACCACCAAAA Neut_2311 2436683 - 2434986 - | ABC transporter-related protein TERM 1789 2435120 - 2435093 - G 82 -12.2 -3.65135 | gap 1, overlap 2435087 2435109 2435112 2435114 CCGAAAGAATCAGAA CTGTGCG-ATTAC TAA GTAATACGCACAG CGCGCGCATCAAGAA TERM 1790 2436167 - 2436152 - G 71 -6.8 -4.25104 | opp_overlap 2436150 2436152 TTTGCCTGATTAAAA GCGCTG CAGC CAGCAC TGTTAGTATCAAAAA TERM 1791 2437111 - 2437155 + r 100 -12.6 -5.32944 | gap 1, opp_overlap 2437112 2437122, overlap 2437112 2437122 TAATTCGAGCTGAAA ATACAGAAAAAGCAGGATAAT TTAA ATTATCCTGCTTTTTCT-TAC TTTTTTAATTCTAAG TERM 1792 2437154 - 2437112 - R 100 -16.1 -4.14511 | gap 1, opp_overlap 2437111 2437112 2437122, overlap 2437122 AATTCGAGCTGAAAA TACAGAAAAAGCAGGATAAT TTAA ATTATCCTGCTTTTTCT-TA CTTTTTTAATTCTAA TERM 1793 2437112 - 2437154 + r 100 -16.1 -3.78682 | gap 1, opp_overlap 2437112 2437122, overlap 2437111 2437122 AATTCGAGCTGAAAA TACAGAAAAAGCAGGATAAT TTAA ATTATCCTGCTTTTTCT-TA CTTTTTTAATTCTAA TERM 1794 2437145 - 2437122 - R 100 -12.6 -5.186 | opp_overlap 2437112 2437111 2437122, overlap 2437112 GAAAATACAGAAAAA GCAGGATAAT TTAA ATTATCCTGC TTTTTCTTACTTTTT TERM 1795 2437122 - 2437145 + r 100 -12.6 -5.30199 | opp_overlap 2437122 2437112, overlap 2437112 2437111 GAAAATACAGAAAAA GCAGGATAAT TTAA ATTATCCTGC TTTTTCTTACTTTTT Neut_2312 2437759 - 2437202 - | hypothetical protein Neut_2313 2440015 - 2437871 - | copper resistance D domain-containing protein Neut_2314 2440452 - 2440021 - | copper resistance protein CopC Neut_2315 2441136 - 2440549 - | hypothetical protein Neut_2316 2441780 - 2441208 - | hypothetical protein TERM 1796 2441977 - 2441941 - R 100 -10.2 -5.89921 | gap 1, opp_overlap 2441941 ATCACAATAAAAAAA CCGGTACACC-TCTGCC TTGC GACAGGCGATGTACCGG TTCTTATTAACTAAT TERM 1797 2441941 - 2441977 + r 72 -8 -3.97709 | gap 1, opp_overlap 2441941 ATCACAATAAAAAAA CCGGTACA-CCTCTGCC TTGC GACAGGCGATGTACCGG TTCTTATTAACTAAT Neut_2317 2443281 - 2442016 - | ammonia monooxygenase/methane monooxygenase, subunit B Neut_2318 2444113 - 2443283 - | ammonia monooxygenase/methane monooxygenase, subunit A TERM 1798 2444244 - 2444277 + r 76 -11.1 -3.03124 | opp_overlap 2444244 TTCTTTTTCCATATA CCCCTTGAAATGTAG TTTC CCAGATTTCAAGGGG TATTCCGGACTAAGC TERM 1799 2444277 - 2444244 - R 86 -13.3 -2.87132 | opp_overlap 2444244 TTCTTTTTCCATATA CCCCTTGAAATGTAG TTTC CCAGATTTCAAGGGG TATTCCGGACTAAGC Neut_2319 2445102 - 2444287 - | ammonia monooxygenase/methane monooxygenase, subunit C TERM 1800 2444646 - 2444635 - G 73 -5.8 -4.45517 | opp_overlap 2444634 AAATGATCCATAAAA CACG ACTA CGTG ACTTGGTGTAAAGCT TERM 1801 2445026 - 2445008 - G 73 -9 -3.74519 | overlap 2444997 AACATGGTTATTAAA CCAAATTT ATA AAATTTGG AGTCATACCACAGTG TERM 1802 2445170 - 2445138 - H 74 -7.9 -4.09243 | opp_overlap 2445145, overlap 2445139 2445141 CACATTTTGTTAAAA CCAGTAATGAAAATT AGA ATTTTTCATTACTGT CCATCGCAAATAACC TERM 1803 2445169 - 2445139 - H 79 -11.4 -3.05224 | opp_overlap 2445145, overlap 2445138 2445141 ACATTTTGTTAAAAC CAGTAATGAAAATT AGA ATTTTTCATTACTG TCCATCGCAAATAAC Neut_2320 2445525 - 2446550 + | Sua5/YciO/YrdC/YwlC family protein TERM 1804 2446618 - 2446638 + G 71 -6.7 -4.25848 | overlap 2446637 TCTCGCAGATACTGA GCGGGATGG ACA CCGGCTCGC TTTTAATCAAGCCTT TERM 1805 2446937 - 2446917 - g 80 -3.3 -5.25799 | AAAACAATATAAAAA TTGCAATCG CCA CAACTACAA CGTACGAGAATGTCA Neut_2321 2446565 - 2447128 + | hydrolase Neut_2322 2448344 - 2447358 - | peptidase M23B Neut_2323 2449134 - 2448466 - | protein-L-isoaspartate O-methyltransferase surE 2450068 - 2449325 - | stationary phase survival protein SurE ihfA 2450935 - 2450627 - | integration host factor subunit alpha Neut_2326 2453526 - 2451148 - | phenylalanyl-tRNA synthetase, beta subunit TERM 1806 2453422 - 2453408 - G 83 -2.7 -5.40474 | ACTTTGTCAAAAAAA GGAGC AACCG GCACC ACACTCTCAACTTCT Neut_2327 2454582 - 2453545 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 1807 2454624 - 2454593 - R 91 -8 -5.28176 | gap 1 TCCACTCATAAAAAA GGGAGGTC-GAGCTA ACA TAGTGCAGACCTCCC CTGATAAATTTGTAT rplT 2455011 - 2454652 - | 50S ribosomal protein L20 rpmI 2455220 - 2455023 - | 50S ribosomal protein L35 Neut_2330 2455874 - 2455386 - | translation initiation factor IF-3 Neut_2331 2457872 - 2455965 - | threonyl-tRNA synthetase TERM 1808 2458155 - 2458124 - R 95 -8 -5.46657 | TATGTCAATAAAAAA CCCGCGAAGTTT TTAAGCTT AATCTCCGCGGG TCCTAGTTTACATCA Neut_2332 2458913 - 2458200 - | NapC/NirT cytochrome c domain-containing protein Neut_2333 2459623 - 2458916 - | cytochrome c-554 precursor Neut_2334 2460806 - 2459685 - | hypothetical protein TERM 1809 2460750 - 2460715 - G 88 -10.4 -4.23781 | overlap 2460710 2460734 CCCAGCAAAACCAAA CCTCCCGTCACCAG TAAAATCC CCAGTGGCGGGAGG AGTCGGTCAAACCAG TERM 1810 2460762 - 2460783 + g 72 -8.6 -3.83026 | opp_overlap 2460762 GAGGAGTCGGTCAAA CCAGCGCG ACTGTG CGCGCCGG TTTGGTGTCAACGAA TERM 1811 2460783 - 2460762 - G 77 -10.8 -3.54741 | opp_overlap 2460762 GAGGAGTCGGTCAAA CCAGCGCG ACTGTG CGCGCCGG TTTGGTGTCAACGAA Neut_2335 2462515 - 2460803 - | hydroxylamine oxidase TERM 1812 2462116 - 2462104 - G 73 -3.3 -5.00616 | overlap 2462105 CTTTTTTGTAAAAAA GCGGA TCT TCCGG CTTGAGGTTGCGTAT Neut_2336 2462807 - 2463892 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Neut_2337 2465029 - 2463893 - | twitching motility protein TERM 1813 2464897 - 2464908 + g 74 -4.4 -4.75356 | AGAGCGCCTGTTGCG TGAC CGGT GTCA TTTTTCCATCTATTT Neut_2338 2466085 - 2465042 - | twitching motility protein Neut_2339 2466280 - 2466996 + | hypothetical protein Neut_2340 2467234 - 2466965 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Neut_2341 2467734 - 2467240 - | pantetheine-phosphate adenylyltransferase Neut_2342 2468281 - 2467727 - | putative methyltransferase Neut_2343 2469597 - 2468296 - | peptidase M16 domain-containing protein TERM 1814 2468457 - 2468434 - G 82 -7.4 -4.61566 | TGGCAAATCATAAAA CCCGATCACC CCCA GGTAACCGAG TATTTTCCGGTTACT Neut_2344 2469966 - 2469763 - | transposase Neut_2347 2472198 - 2471875 - | transposase IS3/IS911 family protein TERM 1815 2472243 - 2472255 + r 72 -7.7 -3.91984 | opp_overlap 2472235 CTCAAAACCCGGGGC GGTTC ACA GAACC TTCTTTACACCATCT Neut_2348 2472539 - 2472246 - | transport-associated Neut_2349 2473202 - 2472738 - | hypothetical protein Neut_2350 2473436 - 2473239 - | CsbD family protein Neut_2351 2473679 - 2473512 - | hypothetical protein Neut_2352 2474992 - 2475390 + | PRC-barrel domain-containing protein Neut_2353 2475450 - 2475686 + | hypothetical protein Neut_2354 2475754 - 2475999 + | hypothetical protein TERM 1816 2476010 - 2476044 + F 100 -13.8 -4.0162 | opp_overlap 2476003, overlap 2476011 GGTAAAATGATTTGT CCTCATGGTTTTACAT TCC GTGTAAAACCATGAGA TTTCTAATCTACCAG TERM 1817 2476011 - 2476043 + F 100 -17.3 -3.00651 | opp_overlap 2476003, overlap 2476010 GTAAAATGATTTGTC CTCATGGTTTTACAT TCC GTGTAAAACCATGAG ATTTCTAATCTACCA TERM 1818 2476157 - 2476145 - g 70 -4.9 -4.66938 | ATGTTGAAGAGAAAA TTATC ACG GATAA TCATACGGGTACTCC Neut_2355 2476096 - 2476551 + | hypothetical protein TERM 1819 2477127 - 2477114 - T 72 -3.1 -4.95155 | GGCAGATGAGAAAAA GTTAC CCTA GCAAC ACATCAGTCGTAAAC Neut_2356 2478555 - 2477617 - | hypothetical protein Neut_2357 2479384 - 2478845 - | transport-associated Neut_2358 2479885 - 2479583 - | hypothetical protein Neut_2359 2480119 - 2479922 - | CsbD family protein Neut_2360 2480362 - 2480195 - | hypothetical protein Neut_2361 2481502 - 2480648 - | transposase, mutator type Neut_2362 2482028 - 2481558 - | transposase, IS4 family protein Neut_2364 2482747 - 2482367 - | hypothetical protein Neut_2365 2482880 - 2483221 + | putative transposase Neut_2366 2483526 - 2484089 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1820 2484115 - 2484158 + F 78 -8.4 -4.15044 | gap 3 CAATTCTGCTTTCAA CCGGCTGCAGCGATACTTCTC CTCTA GAGAGGTATC-C--CAGCCGG TTTCTTCAGACCAGC TERM 1821 2484355 - 2484340 - g 80 -3.2 -5.31275 | CTTGATCACAAAAAA GACTGG GAAG CCATTC AATCCAGTCTGCCTG Neut_2367 2484184 - 2484765 + | putative lipoprotein Neut_2368 2485572 - 2484793 - | band 7 protein Neut_2369 2487001 - 2485574 - | hypothetical protein Neut_2370 2487647 - 2487012 - | nucleoside diphosphate pyrophosphatase Neut_2371 2488712 - 2487798 - | import inner membrane translocase, subunit Tim44 TERM 1822 2489331 - 2489347 + G 90 -12.3 -4.08064 | CTGTTACCCAGCCTA CCAGCCA TTC TGGCTGG TTTTCAGGAAAGATT Neut_2372 2488794 - 2489672 + | hypothetical protein Neut_2373 2490779 - 2489766 - | putative C4-dicarboxylate transporter TERM 1823 2490522 - 2490504 - G 74 -2.4 -5.10497 | overlap 2490521 AAGCCAGGCAAAAAA CGCACT ACACCAA AGTACG TTTGCCAGACTATTT Neut_2374 2491837 - 2491112 - | nucleotidyl transferase Neut_2375 2492850 - 2491852 - | aminoglycoside phosphotransferase TERM 1824 2492914 - 2492931 + H 73 -6.3 -4.35646 | gap 1, overlap 2492917 ATGCTGTCCGATAGT TCGGGCAG GAG CTGCC-GA TTTGTGTTTGCCTGT Neut_2376 2493015 - 2493323 + | hypothetical protein Neut_2377 2493389 - 2494888 + | Mg chelatase, subunit ChlI Neut_2378 2496304 - 2494907 - | replicative DNA helicase TERM 1825 2496071 - 2496112 + g 90 -15.4 -3.19389 | opp_overlap 2496075, overlap 2496073 TTCTGCAACAGTTAT TACATCTGCCGGCTTA CTTTGTTCTA TAAGCCGGCAGATGTG TTGGTAAATGAGTTG TERM 1826 2496073 - 2496110 + g 93 -15.8 -3.15699 | opp_overlap 2496075, overlap 2496071 CTGCAACAGTTATTA CATCTGCCGGCTTA CTTTGTTCTA TAAGCCGGCAGATG TGTTGGTAAATGAGT TERM 1827 2496108 - 2496075 - G 79 -13.3 -2.82987 | opp_overlap 2496073 2496071 GCAACAGTTATTACA TCTGCCGGCTTAC TTTGTTCT ATAAGCCGGCAGA TGTGTTGGTAAATGA TERM 1828 2496359 - 2496388 + r 100 -12.4 -4.00532 | opp_overlap 2496359 2496367, overlap 2496367 TGTCTGATGGAGAAA CAAAAAAAGGAC CGGGTA GTCCTTTTTTTG TTTGGTCTTTACCCA TERM 1829 2496388 - 2496359 - R 100 -13.1 -3.91897 | opp_overlap 2496359 2496367, overlap 2496367 TGTCTGATGGAGAAA CAAAAAAAGGACC GGGT AGTCCTTTTTTTG TTTGGTCTTTACCCA TERM 1830 2496380 - 2496367 - R 100 -4.5 -6.02919 | opp_overlap 2496359 2496367, overlap 2496359 GGAGAAACAAAAAAA GGACC GGGT AGTCC TTTTTTTGTTTGGTC TERM 1831 2496367 - 2496380 + r 100 -3.8 -5.99154 | opp_overlap 2496367 2496359, overlap 2496359 GGAGAAACAAAAAAA GGAC CGGGTA GTCC TTTTTTTGTTTGGTC Neut_2379 2496865 - 2496410 - | ribosomal protein L9 rpsR 2497162 - 2496884 - | 30S ribosomal protein S18 Neut_2381 2497512 - 2497204 - | primosomal replication protein N rpsF 2497948 - 2497514 - | 30S ribosomal protein S6 Neut_2383 2498968 - 2498453 - | hypothetical protein TERM 1832 2499006 - 2498990 - R 74 -2.2 -5.25803 | overlap 2498994 AATCTGTACAAAAAA TCACTC TCGCC GCGTGA CCTTCTTCTTGTGGG Neut_2384 2500109 - 2499222 - | acetylglutamate kinase TERM 1833 2499413 - 2499441 + g 72 -3.7 -4.85599 | GTTCATCTACTCGGC TGGCAGTCAGGCC TGT GAGCAGATTGCCA TTTTTATCCAGTACA Neut_2385 2500651 - 2500172 - | CheW protein Neut_2386 2501045 - 2500680 - | response regulator receiver protein Neut_2387 2501376 - 2501891 + | transport-associated TERM 1834 2502281 - 2502304 + G 100 -8.8 -5.75342 | TTTAAATGAATCTGT CCAGGTGGCT GTCA AGCCTTCTGG TTTTTTTTGGCCACC Neut_2388 2501928 - 2503298 + | D-lactate dehydrogenase (cytochrome) TERM 1835 2503275 - 2503301 + T 77 -6.6 -4.57073 | opp_overlap 2503281, overlap 2503277 CCTTGTAATATCTTG AATCCAGGGAAA TTA TTTCCCTGAATG TTTTTCAGCCAGATA TERM 1836 2503277 - 2503299 + T 79 -9.2 -3.90048 | opp_overlap 2503281, overlap 2503275 TTGTAATATCTTGAA TCCAGGGAAA TTA TTTCCCTGAA TGTTTTTCAGCCAGA TERM 1837 2503328 - 2503360 + T 100 -12.1 -5.75945 | opp_overlap 2503328 GATAAACAAAAAAAA CAGCCCGATAAAAAT TAC ATCCTTATCGGGCTG TTTTTTTTAGAGAAT TERM 1838 2503360 - 2503328 - T 100 -16.5 -6.28967 | opp_overlap 2503328 GATAAACAAAAAAAA CAGCCCGATAAAAAT TAC ATCCTTATCGGGCTG TTTTTTTTAGAGAAT TERM 1839 2503417 - 2503405 - T 83 -4.1 -5.40464 | TATCAGAAATAAAAA TAGTG ATC CACCA ATAGCGCAGTAAACA Neut_2389 2504288 - 2503392 - | protoheme IX farnesyltransferase TERM 1840 2503670 - 2503681 + g 70 -4.4 -4.69664 | overlap 2503663 GTGTTACCGGGAGCA TTGG CATC CCAA TTTTTGCATAATCTG Neut_2390 2504960 - 2504379 - | putative transmembrane protein Neut_2391 2505654 - 2504935 - | SURF1 family protein TERM 1841 2505690 - 2505720 + r 100 -11.3 -4.51847 | CATATAAATTTTTAA GGTTCGATTCTTT ATCTG ACAGAATCGAACC TTTTCTCCGTTATTT Neut_2392 2506592 - 2505747 - | cytochrome c oxidase, subunit III TERM 1842 2506678 - 2506664 - R 79 -5 -5.13343 | overlap 2506665 TAATTTAAAATAAAA CTGCAT GCT ATGCAA AGTTACTGATTATTG Neut_2393 2507302 - 2506784 - | cytochrome C oxidase assembly protein Neut_2394 2509014 - 2507437 - | cytochrome-c oxidase TERM 1843 2508157 - 2508139 - G 74 -8.2 -4.01137 | AAAGCAAGATAACAA TGCAATTG CGG CAATCGCA TAAACCATTGATGTA Neut_2395 2509916 - 2509074 - | cytochrome c oxidase, subunit II TERM 1844 2509118 - 2509132 + g 85 -3.5 -5.4251 | GAGCTGTATTCACAA CTGCA GCTGA TGCGG TTTTTTGTCTCTCCG TERM 1845 2509902 - 2509882 - G 70 -4.7 -4.61747 | opp_overlap 2509882 2509883, overlap 2509883 CCAAGAACTACAAAA CTTGATAGC AAC GCCATCAAC TTACTACCCTTCATA TERM 1846 2510161 - 2510139 - H 91 -6.4 -5.36441 | opp_overlap 2510139 TTTTTATAGAAAAAA TATCCATG TAATTAT CATGGATA TTGCTCTTTTTATCT Neut_2397 2511340 - 2511558 + | heavy metal transport/detoxification protein Neut_2398 2511682 - 2512650 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit Neut_2399 2512742 - 2513998 + | tRNA(Ile)-lysidine synthetase TERM 1847 2514021 - 2514033 + G 89 -10.5 -4.36914 | CAACGATCTTGATTA CCGGC GGC GCCGG TTTTATAGGAACAAA Neut_2400 2514002 - 2515063 + | dTDP-glucose 4,6-dehydratase Neut_2401 2515069 - 2515956 + | dTDP-4-dehydrorhamnose reductase Neut_2402 2516919 - 2515966 - | peptidase S49 TERM 1848 2516240 - 2516261 + g 70 -4.4 -4.6759 | opp_overlap 2516240 2516239 ACGACCTGGATAAAT TGCTGATG AATTTC CACCAGCA TTTTCTTGGCGTGTT Neut_2403 2517609 - 2516947 - | OmpA/MotB domain-containing protein Neut_2404 2518585 - 2517821 - | SH3 type 3 domain-containing protein Neut_2405 2518946 - 2520133 + | transposase, mutator type Neut_2407 2520472 - 2520942 + | transposase, IS4 family protein TERM 1849 2521118 - 2521135 + G 74 -9.9 -3.5518 | opp_overlap 2521116 GCTATCAGATAATTC GCTGGAT ATTA ATCCAGC TTGTCTCGGTATTGG Neut_2408 2521099 - 2521974 + | esterase/lipase/thioesterase family protein Neut_2409 2522114 - 2521989 - | hypothetical protein Neut_2410 2523048 - 2522128 - | integrase catalytic subunit TERM 1850 2522625 - 2522610 - G 74 -2.5 -5.08601 | GGAGTTGAACAAAAA CGAAC TTTGAT GTCCG GTCAATGGCTACAAA Neut_2411 2524375 - 2524052 - | hypothetical protein TERM 1851 2524838 - 2524817 - R 85 -10.1 -4.2828 | opp_overlap 2524817 2524818, overlap 2524818 CCCCACTTACCAAAA TCCCAACCG TTCT CGGTTGGGG TTTTTTCTTGCCCGA TERM 1852 2524817 - 2524838 + r 100 -12.3 -5.4505 | opp_overlap 2524817 2524818, overlap 2524818 CCCCACTTACCAAAA TCCCAACCG TTCT CGGTTGGGG TTTTTTCTTGCCCGA TERM 1853 2524818 - 2524837 + r 100 -13.6 -3.86307 | opp_overlap 2524817 2524818, overlap 2524817 CCCACTTACCAAAAT CCCAACCG TTCT CGGTTGGG GTTTTTTCTTGCCCG TERM 1854 2524837 - 2524818 - R 93 -13.6 -3.16647 | opp_overlap 2524818 2524817, overlap 2524817 CCCACTTACCAAAAT CCCAACCG TTCT CGGTTGGG GTTTTTTCTTGCCCG Neut_2412 2525214 - 2525116 - | hypothetical protein Neut_2413 2525594 - 2525277 - | ISRm2011-2 transposase protein TERM 1855 2525312 - 2525330 + g 71 -10.2 -3.07816 | opp_overlap 2525307 2525310 GGTAAGTAGAGCAGC GCGGCACG GCA CCTGCCGC TTCAATGGCTGCGCG TERM 1856 2525592 - 2525548 - G 74 -11.4 -3.05384 | opp_overlap 2525559 2525560 2525573, overlap 2525552 CCGTGGGGCACCGAA GCCAC-ACAGCGCTGGCCGCGC GGC GCGCGACCC-CGCTGTCGCGTC ATGTTGGTGGTCGTT TERM 1857 2525587 - 2525552 - G 73 -11.8 -2.54896 | gap 1, opp_overlap 2525559 2525560 2525573, overlap 2525548 GGGGCACCGAAGCCA CACAGCGCTGGCCGCGC GGC GCGCGACCC-CGCTGTC GCGTCATGTTGGTGG Neut_2414 2526060 - 2525668 - | putative insertion sequence transposase protein TERM 1858 2526311 - 2526296 - R 76 -6.1 -4.48987 | TTGCGAGAACCAAAA CTGCG CCTACC CGCAG ACCAAATGGAGAATA TERM 1859 2526345 - 2526331 - R 74 -10 -3.15861 | overlap 2526327 AATGGAGAATAGAGA CAGGCT TGG AGCCTG AATCGCTGAAAACAG TERM 1860 2526400 - 2526418 + r 77 -11.6 -2.71712 | overlap 2526399 CAGCTGATGGCTGGA ACCCCGCG CGG CGCGGGGG ATTTCAGGCAAGAAA TERM 1861 2526458 - 2526436 - R 84 -6.9 -5.10461 | opp_overlap 2526436 TTCAGGCAAGAAAAA GGGTCCGGA GATTA TCCGAGCCC TTCAATTTGGTGGTG Neut_2415 2527775 - 2526666 - | filamentation induced by cAMP protein Fic TERM 1862 2527729 - 2527784 + g 91 -3.4 -5.72207 | gap 1, opp_overlap 2527729 2527731 ATGCAACCAATACTA CACCTATTAACACCCA-TTTCAAAGTG ATG CAGCTTGAGATTGGGCATAAATAGGTG TTTTTTTGGTTTGCA Neut_2416 2527975 - 2527826 - | hypothetical protein Neut_2417 2528355 - 2528038 - | ISRm2011-2 transposase protein TERM 1863 2528073 - 2528091 + g 71 -10.2 -3.07816 | opp_overlap 2528068 2528071 GGTAAGTAGAGCAGC GCGGCACG GCA CCTGCCGC TTCAATGGCTGCGCG TERM 1864 2528353 - 2528309 - G 74 -11.4 -3.05384 | opp_overlap 2528320 2528321 2528334, overlap 2528313 CCGTGGGGCACCGAA GCCAC-ACAGCGCTGGCCGCGC GGC GCGCGACCC-CGCTGTCGCGTC ATGTTGGTGGTCGTT TERM 1865 2528348 - 2528313 - G 73 -11.8 -2.54896 | gap 1, opp_overlap 2528320 2528321 2528334, overlap 2528309 GGGGCACCGAAGCCA CACAGCGCTGGCCGCGC GGC GCGCGACCC-CGCTGTC GCGTCATGTTGGTGG Neut_2418 2528821 - 2528429 - | putative insertion sequence transposase protein Neut_2419 2530713 - 2528998 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 1866 2529970 - 2529996 + g 77 -10.8 -3.53224 | opp_overlap 2529973, overlap 2529973 GCCTTCGCCCGGCAA GAAGCTCTCGGC CTC GCCGACAGCTGC TTTCAGCAGAGGATG TERM 1867 2529993 - 2529973 - G 79 -11.1 -3.61398 | opp_overlap 2529970 2529973 TTCGCCCGGCAAGAA GCTCTCGGC CTC GCCGACAGC TGCTTTCAGCAGAGG TERM 1868 2529973 - 2529993 + g 73 -11.1 -2.90496 | opp_overlap 2529973, overlap 2529970 TTCGCCCGGCAAGAA GCTCTCGGC CTC GCCGACAGC TGCTTTCAGCAGAGG Neut_2422 2531682 - 2532152 + | transposase, IS4 family protein TERM 1869 2532332 - 2532306 - f 74 -10.9 -2.64806 | opp_overlap 2532306, overlap 2532305 CCAATCAACAGCAAG CCGGGCAGC-CTG TTC CAGCGC-GCCCGG TTCTTCAAACAGATA TERM 1870 2532306 - 2532332 + F 83 -10.9 -3.61715 | opp_overlap 2532306 2532305 CCAATCAACAGCAAG CCGGGCAGC-CTG TTC CAGCGC-GCCCGG TTCTTCAAACAGATA TERM 1871 2532523 - 2532535 + F 77 -3.3 -5.24449 | opp_overlap 2532523 CAAGCAATTAAGAAA GGGTA GCA TCCCC TTTTTTGCGTTTCTC TERM 1872 2532834 - 2532811 - f 71 -2.4 -5.10497 | overlap 2532813 AATGGAGCCAAAAAA TACTCCAATG GTTG CACTGAAGTG TCAAGATACTTTGGA TERM 1873 2533171 - 2533189 + G 76 -6.6 -4.51378 | opp_overlap 2533171 2533170 TCTACGGCAGAAAAC GCCACGAG GAG TTCGAGGC TTTTCTGATCTGGCT Neut_2424 2533113 - 2534357 + | nuclease SbcCD, D subunit TERM 1874 2536714 - 2536697 - g 73 -3.4 -5.03145 | gap 1 GAATCTCTGAAAAAA CGCATCG ACCAA CGA-GCG CCGGAACTGAAAAAA Neut_2425 2534369 - 2537620 + | SMC domain-containing protein Neut_2426 2539072 - 2537783 - | ABC transporter-related protein Neut_2427 2540833 - 2539094 - | binding-protein-dependent transport systems inner membrane component TERM 1875 2539703 - 2539693 - G 73 -3.2 -4.93296 | CGATCAGCACAAAAA CACG CAC CATG GTTATAAAACCCAGG TERM 1876 2540936 - 2540948 + r 85 -7.7 -4.62069 | ATTTTGGGTGTGTCT GTAGC AAC GCTAC TTTTTGAGATGAAGG Neut_2428 2541219 - 2540986 - | hypothetical protein TERM 1877 2541365 - 2541403 + r 89 -12.1 -3.62275 | opp_overlap 2541374, overlap 2541367 2541374 GCAATGGGATGGCGT CATATGAAATCCTTTTA AAAGA TAAAAGGATTTCATATC TTTAGCCTCATGACT TERM 1878 2541367 - 2541401 + r 100 -14.7 -3.39018 | opp_overlap 2541374, overlap 2541365 2541374 AATGGGATGGCGTCA TATGAAATCCTTTTA AAAGA TAAAAGGATTTCATA TCTTTAGCCTCATGA Neut_2429 2542182 - 2541613 - | hypothetical protein Neut_2430 2542538 - 2543113 + | hypothetical protein TERM 1879 2543290 - 2543240 - T 79 -9.3 -3.96681 | gap 1, opp_overlap 2543247 2543248, overlap 2543242 2543245 GCAATAAATCAATAA TAGCATTCGTACTTGACTGATCAG AATT CTGATCAGTCAAGTACATTTA-TA GTCAATTTTCCGAAT TERM 1880 2543289 - 2543242 - T 77 -10 -3.55605 | opp_overlap 2543247 2543248, overlap 2543240 2543245 AATAAATCAATAATA GCATTCGTACTTGACTGATCAG AATT CTGATCAGTCAAGTACATTTAT AGTCAATTTTCCGAA TERM 1881 2543286 - 2543245 - T 87 -13.9 -2.88677 | opp_overlap 2543247 2543248, overlap 2543242 2543240 AAATCAATAATAGCA TTCGTACTTGACTGATCAG AATT CTGATCAGTCAAGTACATT TATAGTCAATTTTCC TERM 1882 2543247 - 2543284 + T 100 -18.7 -4.01078 | opp_overlap 2543245 2543242 2543240, overlap 2543248 ATCAATAATAGCATT CGTACTTGACTGATCAG AATT CTGATCAGTCAAGTACA TTTATAGTCAATTTT TERM 1883 2543248 - 2543283 + T 100 -22.2 -2.99562 | opp_overlap 2543245 2543242 2543240, overlap 2543247 TCAATAATAGCATTC GTACTTGACTGATCAG AATT CTGATCAGTCAAGTAC ATTTATAGTCAATTT Neut_2431 2544734 - 2543292 - | glucose-6-phosphate 1-dehydrogenase Neut_2432 2545807 - 2544752 - | 6-phosphogluconate dehydrogenase-like protein Neut_2433 2548106 - 2545800 - | phosphoglucose isomerase (PGI) TERM 1884 2545832 - 2545851 + g 76 -4.2 -5.00616 | opp_overlap 2545832 2545834, overlap 2545834 CCCACAGGCGAAAAC CACCAGTG AATG CATTGGCG TTTTTTCCACGGCGA Neut_2434 2549276 - 2548443 - | parB-like partition proteins TERM 1885 2548980 - 2548949 - G 88 -10.3 -4.1347 | gap 2 TTTCAATCAGAGAAA GCGC-AAGTG-CGGA TTCA TCCGGCACTTCGCGC ACAATGGCTGGAATC Neut_2435 2550091 - 2549327 - | cobyrinic acid a,c-diamide synthase TERM 1886 2549391 - 2549365 - G 71 -10.8 -3.17075 | opp_overlap 2549370 2549371, overlap 2549370 2549371 CGTTGGCCAATTCAA GATAAGCCCGGG CAC CCCGGGATTGTC GATCGTGATAAAGCA TERM 1887 2549386 - 2549370 - G 73 -9.3 -3.71686 | opp_overlap 2549370 2549371, overlap 2549365 2549371 GCCAATTCAAGATAA GCCCGGG CAC CCCGGGA TTGTCGATCGTGATA TERM 1888 2549371 - 2549385 + g 76 -12.8 -2.62642 | opp_overlap 2549370 2549365 2549371, overlap 2549370 CCAATTCAAGATAAG CCCGGG CAC CCCGGG ATTGTCGATCGTGAT TERM 1889 2549385 - 2549371 - G 77 -12.8 -2.82529 | opp_overlap 2549371 2549370, overlap 2549370 2549365 CCAATTCAAGATAAG CCCGGG CAC CCCGGG ATTGTCGATCGTGAT Neut_2436 2550799 - 2550155 - | methyltransferase GidB Neut_2437 2552699 - 2550774 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1890 2551618 - 2551605 - GR 76 -3.1 -5.14563 | CTGCCCAGCAAAAAA CAATC CGTC GATCG CTTTTGTTTCCAAAG TERM 1891 2552948 - 2552903 - R 74 -10.7 -2.76171 | opp_overlap 2552916, overlap 2552912 2552916 2552946 CGGAACAAGGACAAG TGGTAATTACAAAGATGTTTC ACGT GAAACATCTTTGTAATAAGCG TGCCATGAACGCCTC TERM 1892 2552939 - 2552912 - R 87 -14.4 -2.74019 | opp_overlap 2552916, overlap 2552903 2552916 GACAAGTGGTAATTA CAAAGATGTTTC ACGT GAAACATCTTTG TAATAAGCGTGCCAT TERM 1893 2552935 - 2552916 - R 81 -9.4 -4.05714 | opp_overlap 2552916, overlap 2552912 2552903 AGTGGTAATTACAAA GATGTTTC ACGT GAAACATC TTTGTAATAAGCGTG TERM 1894 2552916 - 2552935 + r 81 -9.4 -3.96624 | opp_overlap 2552912 2552903 2552916 AGTGGTAATTACAAA GATGTTTC ACGT GAAACATC TTTGTAATAAGCGTG Neut_2438 2553545 - 2553081 - | FlgN family protein Neut_2439 2553849 - 2553547 - | anti-sigma-28 factor, FlgM TERM 1895 2553825 - 2553838 + g 70 -4.5 -4.64861 | CAAGCTCTGTATGCC CCGGA GATA TCTGG TTTATTTTCACGACG TERM 1896 2554920 - 2554943 + G 74 -9.6 -3.51708 | CATGCTGCCATTCGC CCTGCTGC TGGGGATT GCAGCAGG TTACTTTCGCGGCTG Neut_2440 2554129 - 2555622 + | binding-protein-dependent transport systems inner membrane component TERM 1897 2556429 - 2556408 - g 89 -2.3 -5.71983 | gap 1, opp_overlap 2556410, overlap 2556409 2556410 2556413 CCAACGAGAAAAAAA CG-CAATCAG AAA CTGATCGTCA TTCAGGGAAATGTGC Neut_2441 2555619 - 2557676 + | oligopeptide/dipeptide ABC transporter, ATPase subunit prfC 2557673 - 2559280 + | peptide chain release factor 3 flhB 2559532 - 2560662 + | flagellar biosynthesis protein FlhB TERM 1898 2561580 - 2561564 - g 73 -8.7 -3.68569 | CCAGCTACTTAACAA GCCACAG GCA CTATGGC TGACAGCGGGTATCC TERM 1899 2561595 - 2561629 + G 82 -4.1 -5.3658 | overlap 2561596 CTGACAGCGGGTATC CTCGGCGCGCTGGGC CTGGT GCCTGGTATGCCGAA TTTTGTTTTTCTGCT flhA 2560710 - 2562794 + | flagellar biosynthesis protein FlhA TERM 1900 2563082 - 2563070 - g 77 -10.5 -3.59202 | overlap 2563057 2563055 CAGCCGGAGACACAA CCGCC TGC GGCGG ACAGCCCGGGCGCGC TERM 1901 2563729 - 2563696 - g 70 -2.4 -4.96501 | gap 1, overlap 2563700 2563722 TGGTACAAAAATAAA GCACCTGCTG-TTAC TCAAT GCAACCAGCAGCGGC GATACGCTGGACGAA flhF 2562791 - 2564062 + | flagellar biosynthesis regulator FlhF Neut_2446 2564055 - 2564948 + | putative MinD-related protein Neut_2447 2564957 - 2565667 + | RNA polymerase, sigma 28 subunit TERM 1902 2565859 - 2565836 - f 81 -12.4 -2.53382 | overlap 2565825 ATCATTGGCAACTCA CGCTCGCTGC AACG GCAGCGAGCT GAGGAACGTATCGAT Neut_2448 2565873 - 2566151 + | type I restriction-modification system Neut_2449 2566336 - 2566773 + | hypothetical protein TERM 1903 2566870 - 2566893 + G 71 -10.2 -3.05384 | opp_overlap 2566861 ACAGCAGGGTCGCGC GCCGCGCGGC CAGC GCTGTGTGGC TTCGGTGCCCCACGG Neut_2450 2566847 - 2567320 + | ISRm2011-2 transposase protein Neut_2452 2568835 - 2567987 - | integrase catalytic subunit TERM 1904 2568219 - 2568238 + g 70 -4.2 -4.65747 | TTGTCGTAGCTGTCG CCCTTGCT GCCG ACCGAGGG TTTTATTCCGGCTTC Neut_2453 2569215 - 2568892 - | transposase IS3/IS911 family protein TERM 1905 2569269 - 2569299 + G 77 -11.8 -3.15663 | CGGGGCGGTTCAATT GCGGATGCTGTTCG CCG CGCACGGCATCGGC TTGATCAAACTGGAT Neut_2454 2569267 - 2569503 + | hypothetical protein Neut_2455 2570176 - 2569613 - | NADPH-dependent FMN reductase Neut_2456 2571125 - 2570220 - | aldose 1-epimerase Neut_2457 2571268 - 2574111 + | aconitate hydratase TERM 1906 2574158 - 2574189 + T 75 -9.4 -3.43071 | overlap 2574153 2574156 GATTTGATGTCCTGG GTATCCAGCCCTTT TTCC AGTGGGCCGGATAC TTGATTCATGTACCA Neut_2458 2575503 - 2574232 - | hydroxypyruvate reductase Neut_2459 2578337 - 2575500 - | excinuclease ABC, A subunit TERM 1907 2578225 - 2578183 - G 73 -9.3 -3.69256 | gap 2, opp_overlap 2578183, overlap 2578217 AGTGATTCAACATAA CGCCGCTGGCCTTCCGCATAC AGC GTAT-CGAAA-GCCAGCGAAG ATTTGCCGGAGCCGG TERM 1908 2579272 - 2579285 + G 71 -5.2 -4.46615 | opp_overlap 2579272, overlap 2579277 TGCCGAGAAAAAAGC CCGG ATGAAA CCGG TTTTCATTGCTGCTG TERM 1909 2579499 - 2579481 - g 70 -11 -2.62184 | opp_overlap 2579480 2579481 TTGGCGTTTACAGCA GCACCCAG TTT CTAGGTGC GTTTGTTGGCTCCGC TERM 1910 2579511 - 2579523 + G 77 -10.5 -3.53444 | overlap 2579507 GTGCGTTTGTTGGCT CCGCC TTG GGCGG TTACTTGTTCCAGCA Neut_2460 2578412 - 2579818 + | major facilitator transporter Neut_2461 2579819 - 2580286 + | single-strand binding protein TERM 1911 2580342 - 2580316 - f 82 -7.9 -4.53439 | opp_overlap 2580338 GTAAATGCAAATAAA CCCGGGCAAAC TTATC GCTCGTCCGGG CTCCGGTTTTTATCT TERM 1912 2580338 - 2580348 + F 87 -8.2 -5.0916 | opp_overlap 2580316 AAACTTATCGCTCGT CCGG GCT CCGG TTTTTATCTTCCACA Neut_2462 2580489 - 2582279 + | ABC transporter-related protein Neut_2463 2582280 - 2583212 + | cytochrome c, class I TERM 1913 2583220 - 2583200 - T 87 -8.4 -4.58395 | TCCACCTGCGAAAAA CAGCAAAA AATGA TTTTGCTG CTGCCGCTGGTAACG Neut_2464 2584217 - 2583258 - | spermidine synthase TERM 1914 2583476 - 2583455 - G 77 -11.7 -3.16191 | opp_overlap 2583451 2583447 CTAGACGTGCATTAA CTTCTTCTG AGCT CAGAAGAAG AGGATCAGTTGTATC Neut_2465 2584624 - 2584217 - | S-adenosylmethionine decarboxylase-related protein TERM 1915 2584801 - 2584827 + r 70 -2.8 -5.00884 | opp_overlap 2584797 2584801 2584802, overlap 2584802 2584803 ACTGTAAGCAAGCAA CGCTGGCTGCAC TCT GTCCGGCCAGGA TTTTTTCAAGCCGCT Neut_2466 2588458 - 2585018 - | acylglycerophosphoethanolamine acyltransferase TERM 1916 2585861 - 2585846 - G 73 -3.2 -4.99035 | gap 1, overlap 2585848 2585849 TGATGGATACAAAAA GACCCGG ATA CCGGA-C AACACTGGCAGCAAT TERM 1917 2587896 - 2587877 - G 83 -10 -4.15788 | opp_overlap 2587892, overlap 2587889 2587890 AACCGGGGGAATAAA CAGGCTGA ATAA CCAGCCTG CCAATGCCACGCTGA TERM 1918 2588615 - 2588629 + H 73 -6.4 -4.43309 | GTGGTTCAAGCTATT TGACGG TTA TCGTCA TTTTCATTGCAATTA TERM 1919 2591471 - 2591447 - g 70 -2.9 -4.86001 | gap 1, overlap 2591453 ACCACTGCAGAAAAA TCAACAGTGC ATACCG GCAC-GCTGA ACGCGGTCCCTGCAC Neut_2467 2588705 - 2591578 + | ribonucleotide-diphosphate reductase subunit alpha TERM 1920 2591710 - 2591700 - g 70 -3.2 -4.77122 | overlap 2591701 CCACACAAAAAACAA CTGC TGA ACAG CAAGGGCTGCACGAA Neut_2468 2591630 - 2592763 + | ribonucleotide-diphosphate reductase subunit beta TERM 1921 2593025 - 2593009 - g 95 -5.1 -5.61596 | opp_overlap 2593012, overlap 2593012 ATCTTTAGAAAAAAA TAACGGT ATT ACCGTTC TGGAAACAAAGCCGT TERM 1922 2593022 - 2593012 - g 82 -6.8 -4.89054 | opp_overlap 2593012, overlap 2593009 TTTAGAAAAAAATAA CGGT ATT ACCG TTCTGGAAACAAAGC TERM 1923 2593560 - 2593538 - g 71 -7 -4.1552 | CATGGTGGGAATAAA TCAATCAGCT ACC AGCAGATCGA CCTTCCCTCCGAAAC Neut_2469 2592911 - 2594275 + | lytic transglycosylase, catalytic Neut_2470 2597883 - 2594263 - | urea amidolyase related protein TERM 1924 2594789 - 2594777 - G 83 -3.3 -5.40474 | overlap 2594781 ATCTGGTCAAAAAAA CGCAG CAA CCACG GTTTGCCAGCAGTAA TERM 1925 2595516 - 2595492 - G 78 -10 -3.90922 | opp_overlap 2595513 2595514 ATTGTCGGTAAACAA CCTGCACCTG CCTGT CAGTTGCAGG AATCCGGTGTAATAT TERM 1926 2595609 - 2595637 + g 71 -10.3 -3.07962 | GTTCCTGAATCATCT TGTCCTGTTGCTG TTC CAGCAGCAGTGCA TATTCCACTGTCAGC TERM 1927 2598588 - 2598552 - g 89 -10.2 -4.431 | gap 1, overlap 2598553 2598554 CACGGAGGGATAAAA GC-CCGGGAGGTTATGT TTTT ACATGAACTCCCGGAGC CCCCAATGGAAAAGT TERM 1928 2598586 - 2598553 - g 73 -10.3 -3.25378 | overlap 2598552 2598554 ACGGAGGGATAAAAG CCCGGGAGGTTATGT TTTT ACATGAACTCCCGGA GCCCCCAATGGAAAA TERM 1929 2598585 - 2598554 - g 70 -11.6 -2.54745 | overlap 2598553 2598552 CGGAGGGATAAAAGC CCGGGAGGTTATGT TTTT ACATGAACTCCCGG AGCCCCCAATGGAAA Neut_2471 2598498 - 2598809 + | hypothetical protein TERM 1930 2599380 - 2599428 + G 80 -3.2 -5.30348 | gap 1, overlap 2599379 AATAATCAACTTACT CGGGGTCAGTGCTG-AAGTATTG GGCT CGATATGTGTCGCACTGATCCTG TTTTTCTTCTTCCGT TERM 1931 2599916 - 2599904 - g 76 -3.3 -5.19328 | overlap 2599905 2599909 ATGTCACAAGAAAAA CGCAA CTG CCGCG CAATGCAATCGCCGG TERM 1932 2599946 - 2599960 + G 70 -4.2 -4.62783 | overlap 2599947 GAACCGTGCTTATGG CCAGTC TCG GACTGC TTTTTGGGCTGAATG Neut_2472 2598829 - 2600367 + | amino acid permease-associated region Neut_2473 2600382 - 2601110 + | hypothetical protein Neut_2474 2601107 - 2601772 + | hypothetical protein TERM 1933 2602420 - 2602442 + G 76 -7.6 -4.41348 | overlap 2602422 AAAATCGCAGTGCTA TATGGCCCGC ATG GCGCGCCAGA TTTCTTTACAGAAAA TERM 1934 2603834 - 2603823 - g 76 -5.8 -4.64861 | TGCCTTCAAAACAAA GCAG AAAG CTGC CTACATAGCTGAGCG Neut_2475 2601826 - 2604159 + | urea amidolyase related protein Neut_2476 2604291 - 2604734 + | UspA domain-containing protein Neut_2477 2605878 - 2604805 - | lytic murein transglycosylase B Neut_2478 2606450 - 2606776 + | thioredoxin rho 2606990 - 2608249 + | transcription termination factor Rho Neut_2481 2609410 - 2609129 - | septum formation initiator TERM 1935 2609443 - 2609428 - R 70 -6.8 -4.14392 | opp_overlap 2609426 2609428 TTTTAACTGGTAAAA CGCTGA CCTT CCAGCG TATTGTGCGACATCA eno 2610693 - 2609407 - | phosphopyruvate hydratase Neut_2483 2612676 - 2610982 - | CTP synthetase TERM 1936 2611367 - 2611394 + g 70 -10.6 -3.00797 | overlap 2611366 2611388 CCTCCCAGGCGCATG GTTCCTCCCAGA TCCG TCTGGGGAGAAC GTTTCTCGATTTGCC TERM 1937 2612979 - 2612989 + G 76 -8.2 -4.14627 | TATTGCTTTTTTTTC CGGG AAT CCCG TTATTTCTCTGCGGG Neut_2484 2612858 - 2613250 + | succinate dehydrogenase, cytochrome b subunit Neut_2485 2613244 - 2613597 + | succinate dehydrogenase, cytochrome b subunit TERM 1938 2614592 - 2614574 - g 82 -11 -3.77219 | overlap 2614560 2614575 ACCATCCAATCCAAA CTTCCCGG CAT CCGGGAAA TCTCGCTCAGATTTG TERM 1939 2614591 - 2614575 - g 74 -12.3 -2.8585 | overlap 2614574 2614560 CCATCCAATCCAAAC TTCCCGG CAT CCGGGAA ATCTCGCTCAGATTT Neut_2486 2613599 - 2615362 + | succinate dehydrogenase, flavoprotein subunit Neut_2487 2615440 - 2616414 + | ankyrin TERM 1940 2617226 - 2617241 + G 76 -4.6 -4.96848 | AAAAAATCGGTGGTG CAGTCG AGGC CGCCTG TTTTTCTGTCAGGGA Neut_2488 2616631 - 2618937 + | cell divisionFtsK/SpoIIIE Neut_2489 2618997 - 2619617 + | outer membrane lipoprotein carrier protein LolA TERM 1941 2619607 - 2619617 + F 83 -5.4 -5.18726 | AAGGGGTGGACGTGA TCAG TGA CTGA TTTTTGTTCTACGCA TERM 1942 2619716 - 2619734 + G 70 -4.5 -4.60797 | ATCTGTTGGGTTCCG GCAAGCC TCTGC GACTTGC TTTTATATCTGGCAA Neut_2490 2619610 - 2620926 + | recombination factor protein RarA Neut_2491 2621628 - 2620954 - | lipoprotein releasing system, ATP-binding protein Neut_2492 2622868 - 2621621 - | lipoprotein releasing system, transmembrane protein, LolC/E family protein TERM 1943 2621724 - 2621710 - G 77 -10 -3.76411 | overlap 2621713 2621714 TCAAAATCAGGGAAA CAACCG CAA CGGTTG CAATATCGGCCAATT TERM 1944 2622946 - 2622976 + r 77 -10.5 -3.4647 | overlap 2622944 ATTTGTGTCATTGAC CCGGCAGATATGT CTGAT GCATATCTACCGG TATTTGAATATTGGC Neut_2493 2624071 - 2623007 - | PEP motif-containing protein TERM 1945 2623569 - 2623559 - G 70 -2.4 -5.00616 | opp_overlap 2623559 CCTGCCTGGAAAAAA GCTG CCA CCGC TTCCTGGAGGTGAAT Neut_2494 2624381 - 2624644 + | hypothetical protein Neut_2496 2625303 - 2625773 + | transposase, IS4 family protein TERM 1946 2626307 - 2626322 + G 74 -2.5 -5.08601 | TTTGTAGCCATTGAC CGGAC ATCAAA GTTCG TTTTTGTTCAACTCC Neut_2497 2625884 - 2626804 + | integrase catalytic subunit Neut_2499 2627167 - 2627637 + | transposase, IS4 family protein TERM 1947 2628935 - 2628915 - f 70 -6.7 -4.05446 | opp_overlap 2628931 CCCTTCAACCATAAA CCCCGGCAG CAG CCAGCGGGG AGTCTGTAGAACCCC Neut_2500 2629597 - 2629920 + | transposase IS3/IS911 TERM 1948 2630593 - 2630574 - g 70 -4.2 -4.65747 | GAAGCCGGAATAAAA CCCTCGGT CGGC AGCAAGGG CGACAGCTACGACAA Neut_2501 2629977 - 2630825 + | integrase catalytic subunit TERM 1949 2631150 - 2631162 + T 76 -7.7 -4.18488 | GGAACCTTGCCCCTA CAGCA TCG TGCTG TTTCTTGCCCTCACT Neut_2502 2631846 - 2631376 - | transposase, IS4 family protein TERM 1950 2632260 - 2632289 + r 87 -5.7 -5.40464 | TATCAATGACTTGTG TGGCTGCTGCATT TCCG AGTGTGGTGGCCA TTTTTATTTATCCTC TERM 1951 2632479 - 2632462 - R 80 -7 -4.75472 | opp_overlap 2632462 GGCAGACGAAGAAAA CCCTCT TGTGTC AGAGGG TTAGTTGTACCTTTC Neut_2504 2633108 - 2632596 - | hypothetical protein Neut_2505 2634373 - 2633108 - | phage integrase family protein TERM 1952 2634434 - 2634412 - R 78 -6.3 -4.7254 | opp_overlap 2634424, overlap 2634413 ACTTTCTACGAAAAA GCAGTAACC CCGGC GGTTACTGT AAAAGTTACTGCATA TERM 1953 2634433 - 2634413 - R 75 -9.8 -3.43042 | opp_overlap 2634424, overlap 2634412 CTTTCTACGAAAAAG CAGTAACC CCGGC GGTTACTG TAAAAGTTACTGCAT TERM 1954 2634819 - 2634834 + r 95 -3.2 -5.626 | overlap 2634802 2634821 GCTAAAGCGTAGTTT TCGTCG TTTG CGACTA TTTTTTTCTCAGCTG TERM 1955 2634821 - 2634832 + r 72 -5.8 -4.45201 | overlap 2634802 2634819 TAAAGCGTAGTTTTC GTCG TTTG CGAC TATTTTTTTCTCAGC Neut_2506 2635638 - 2634988 - | phosphoglycolate phosphatase TERM 1956 2635426 - 2635455 + g 70 -9.3 -3.53012 | gap 1, opp_overlap 2635412 GGAGAGAAACTCCTC CCGCATGA-CCTGG TAA CCGGGATCATCCGG TTTCAAACCAAAACC Neut_2507 2636425 - 2635667 - | 3-demethylubiquinone-9 3-methyltransferase TERM 1957 2636546 - 2636565 + r 88 -10.7 -4.21194 | opp_overlap 2636546 CTTTCATAGCCAAAA GCCCTGC ACGCTG GCAGGGC TTTTAGGTGATCCAC TERM 1958 2636565 - 2636546 - R 88 -10.7 -4.2349 | opp_overlap 2636546 CTTTCATAGCCAAAA GCCCTGC ACGCTG GCAGGGC TTTTAGGTGATCCAC Neut_2508 2637295 - 2636600 - | OmpA/MotB domain-containing protein TERM 1959 2638209 - 2638188 - g 80 -4.3 -5.06505 | overlap 2638191 AACCAGATACAAAAA GTACGCGCA CTGA TTCGCGAAC TCGGTAAAACTCACG Neut_2509 2637654 - 2638412 + | ABC transporter-related protein Neut_2510 2638409 - 2639155 + | putative ABC-2 type transport system permease protein TERM 1960 2639702 - 2639687 - g 73 -5.4 -4.66163 | ATGGTGAGCGAAAAA TGGATG GTGT CACCCA GCGTGATATGGGGAA Neut_2511 2639179 - 2640531 + | hypothetical protein TERM 1961 2640553 - 2640563 + F 71 -4 -4.86001 | ATCCAGTTTCTGCTG TTTG CTA CAAA TTTTTGTCAGATCAT TERM 1962 2641044 - 2641028 - g 70 -4.3 -4.66347 | ATGAAAAAATACAAA GACGCAG TAT CAGCATC AAAGAAGCACTCATG Neut_2512 2640577 - 2641392 + | formamidopyrimidine-DNA glycosylase Neut_2513 2642077 - 2641427 - | putative protein-disulfide isomerase Neut_2514 2643891 - 2642077 - | GTP-binding protein TypA Neut_2515 2644024 - 2644629 + | riboflavin synthase subunit alpha Neut_2516 2644626 - 2645735 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein ribH 2645957 - 2646454 + | riboflavin synthase subunit beta TERM 1963 2646590 - 2646614 + G 73 -5.8 -4.56597 | opp_overlap 2646590 GAAATGCTCAGGAAA TTGACCTG CAACTGCAA CAGGTCAA TTTTTACAGCAAAGC Neut_2518 2646451 - 2646954 + | NusB antitermination factor TERM 1964 2647690 - 2647701 + G 74 -3.6 -5.00616 | GCCGGGAGATGATAT CTGG GTAT CCGG TTTTTTGGGAGACGC TERM 1965 2647992 - 2647981 - g 71 -5.8 -4.43012 | overlap 2647982 ACTGCAACAGGAAAA TGCC ACTC GGCA ATTGGCCATTGACTG Neut_2519 2647229 - 2648215 + | thiamine-monophosphate kinase Neut_2520 2648193 - 2648735 + | phosphatidylglycerophosphatase A TERM 1966 2649111 - 2649098 - g 70 -2.3 -4.96848 | opp_overlap 2649099, overlap 2649099 GGTTCCACAGAAAAA CCGGT CGGC ACCGT TTGTTTCGCCTGGAT TERM 1967 2649099 - 2649110 + G 73 -5.8 -4.44046 | opp_overlap 2649098 2649099 GTTCCACAGAAAAAC CGGT CGGC ACCG TTTGTTTCGCCTGGA TERM 1968 2649199 - 2649165 - g 71 -5.5 -4.49756 | overlap 2649159 2649147 2649157 2649195 CTGCAAACAGCAAAA CCTGCCGGTTCCGCG GTGAT CGCGAAGCCATCCGG CGACAATCTGTCGCC Neut_2521 2648732 - 2649274 + | CinA domain-containing protein TERM 1969 2649696 - 2649713 + T 91 -11.3 -3.75665 | opp_overlap 2649696 CTTCAAAAAGAAAAA GGGCAGA GTAA TCTGCCC TTTCCTACAGTGTGA TERM 1970 2649713 - 2649696 - T 100 -11.3 -5.61881 | opp_overlap 2649696 CTTCAAAAAGAAAAA GGGCAGA GTAA TCTGCCC TTTCCTACAGTGTGA Neut_2522 2650988 - 2649747 - | porin Neut_2523 2652931 - 2651312 - | ATP-dependent DNA helicase RecQ TERM 1971 2651961 - 2651973 + g 80 -10.5 -3.80573 | GGCAGGCCATCCCGC CCGGC CCG GCCGG TTTCCTGATAATAGC TERM 1972 2652176 - 2652189 + g 79 -8.1 -4.36372 | AATGTGATTAGCATT CAGCC AGGC GGCTG TTTCTTCAGTTTTTT Neut_2524 2653338 - 2652928 - | RNA-binding S4 domain-containing protein Neut_2525 2654168 - 2653335 - | hypothetical protein TERM 1973 2654055 - 2654025 - G 83 -13.2 -3.2794 | opp_overlap 2654030 GCCCACTGACAGCAA CGCAACCGGCGCGG CTT CCGCTACGGTTACG TTCAGGCCAAAAATC Neut_2526 2655858 - 2654176 - | hypothetical protein TERM 1974 2655398 - 2655416 + g 77 -9.6 -3.71645 | TCAAAAACATCATCC CAGTTGCA AGC TGCGACTG TTTCGGTCTGACGTT TERM 1975 2655575 - 2655563 - G 70 -4.7 -4.59773 | CCCGAGCCGCAAAAA GCCAG TAC CGGGC CAGGCAGTGTTTGCA Neut_2527 2656394 - 2655969 - | transcriptional regulator, HxlR family protein Neut_2528 2656858 - 2656391 - | protein of unknown function DUF395, YeeE/YedE TERM 1976 2656510 - 2656491 - G 71 -10.8 -3.14134 | overlap 2656487 ATACCCAGCAACATA GCCATCAT AAAT ATGATGGC TCCGGAATGACCCGA Neut_2529 2657316 - 2656888 - | protein of unknown function DUF395, YeeE/YedE TERM 1977 2657025 - 2656992 - G 71 -7.5 -4.04318 | gap 1 GCGATAGACCACAAA CGCCATGACCGCTGGT ACA ACCAG-AGCCATAACG AGTCCCAACTCCGAC Neut_2530 2657425 - 2658288 + | beta-lactamase domain-containing protein Neut_2531 2658957 - 2658373 - | twin-arginine translocation pathway signal Neut_2532 2660701 - 2659016 - | peptidoglycan binding domain-containing protein