TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.370597 %AT, 4616494 nt, 41602 terms. Intergenic: 0.460521 %AT, H2T: 465510 nt, 4550 terms; T2T: 136354 nt, 3122 terms; H2H: 165487 nt, 3207 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|121582711|ref|NC_008757.1| Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete sequence (length 353291) Pnap_4123 1040 - 483 - | resolvase domain-containing protein TERM 1 541 - 581 + g 86 -4.6 -5.1101 | gap 1, overlap 542 548 ACGGACACGCCCAGG TTCTTGGCCA-CGTCACGC GGCG GCACGCCGCTGGCCAGGAG TTTTTTGGCTGATGC Pnap_4124 1218 - 1526 + | transposase Tn3 Pnap_4125 2436 - 1477 - | transposase, IS4 family protein TERM 2 1636 - 1652 + g 78 -6.5 -4.54821 | opp_overlap 1636 GTTCTCCACCAAGGA GCGGC AGTGGTA GCCGC TTTTGTCCTTCCAGT TERM 3 2356 - 2380 + g 73 -11.3 -3.62046 | overlap 2362 2363 ATTTCCCCGCTCGAT CAGGCCCGCGT TGT ACTCGGGCCAG TTCTTGACCCGGTAA Pnap_4126 3492 - 2737 - | metallophosphoesterase TERM 4 3357 - 3345 - G 85 -6.2 -5.09895 | CACCGACCGAAAAAA GCCG ATCTA CGGC AGGATCAAAGCCAAT Pnap_4127 5871 - 3514 - | hypothetical protein TERM 5 4314 - 4328 + g 74 -5 -4.58395 | opp_overlap 4278 4310, overlap 4316 AGTTAAAAAAGCCTG TGCTTG GCT CAAGTA TTTTTGCAAGGTGAA TERM 6 4525 - 4537 + g 71 -5.5 -4.28774 | CGCGGCGGCCAGCAC CGGTG CAT CATCG TTTTCCATTGCATGG TERM 7 4845 - 4876 + g 81 -10.1 -4.11216 | gap 1 GGCTGCTGATCAGGA GGCG-CTGGCGTGC TTCTC GCAAGCCGGTCGCC TTTTGCAACTGCGCA TERM 8 5701 - 5680 - G 75 -2.9 -4.87786 | GGAACTCGACAAAAA CGACAGCCA AGCC TCGATGTCG GACACAAGCGTCCAG Pnap_4128 7399 - 6104 - | HipA domain-containing protein TERM 9 6843 - 6830 - G 76 -6.7 -4.51812 | TTGCATAACAACAAA TTCCC TGGC GGGAA GATGCGGAACATCGC TERM 10 7692 - 7740 + G 100 -19.3 -4.29227 | opp_overlap 7672 ATGGTGCAGTGCTCA TTACCCGAATCGTAATCTGAAAT TTT ATTTTAGATTGCTATTCGGGTAA TTTATTGCTCATTCA Pnap_4129 7465 - 7740 + | hypothetical protein TERM 11 8248 - 8215 - g 76 -6.1 -4.5852 | gap 1, overlap 8245 GAACCCAAATGAAAA TCTCATTCGCAGACAC CCT GTGTCT-CAAACGCGA AGCCAAGAAACTTGG TERM 12 8398 - 8413 + G 73 -3.2 -4.70879 | overlap 8394 8392 TCGTGCTGTCCGATG GCATGG CCAC CTGTGC TTTTTGCGGTTTACA TERM 13 8563 - 8552 - g 81 -2.2 -5.13741 | CGAAGCCAATAAAAA GCAT GGGT ACGC CCTTTTGAGTGATAC Pnap_4130 8115 - 8825 + | hypothetical protein Pnap_4133 10319 - 9783 - | hypothetical protein TERM 14 11580 - 11561 - g 72 -4.4 -4.57569 | gap 1 GTACGGCGTCAAAAA TGGA-TTGA TTC TCAAGTCCA TGATGGACACTCCAG Pnap_4134 10764 - 11669 + | hypothetical protein TERM 15 11697 - 11711 + F 76 -10 -3.86822 | opp_overlap 11707 GAGTTTCATTCCCCG GTGGCT AAA AGCCAC TTTATGGCCCGCTTA TERM 16 11717 - 11735 + F 100 -13.1 -5.47218 | opp_overlap 11707 TAAAAGCCACTTTAT GGCCCGC TTAGT GCGGGCC TTTTTTTAAATACCG TERM 17 11783 - 11772 - g 74 -2.2 -4.95547 | GTGACAATAAGAAAA TCAG ACAT CCGA GAATTAAATAAACTT TERM 18 12147 - 12135 - g 80 -5.5 -4.77759 | overlap 12136 AGAACTGATCAAAAA CGCTG GCA CAGCA AAGCTCCCAGAACCA Pnap_4135 11757 - 12239 + | hypothetical protein TERM 19 12403 - 12370 - f 100 -21.1 -4.22214 | opp_overlap 12358, overlap 12371 AGGGAGGGAAAATAA CGGTACAGGCGGCCT AATT AGGCCGCCTGTACCC AGACTTAGCGGCTTT TERM 20 12402 - 12371 - f 100 -24.6 -3.12605 | opp_overlap 12358, overlap 12370 GGGAGGGAAAATAAC GGTACAGGCGGCCT AATT AGGCCGCCTGTACC CAGACTTAGCGGCTT TERM 21 12657 - 12681 + G 73 -6.4 -4.26076 | gap 1 CCGAATTTGGCTGAT CTACGCTGAGG CCCG CCACAGCG-AG TTTTCCTAGGGATCA Pnap_4136 12451 - 12690 + | hypothetical protein Pnap_4137 12802 - 14004 + | phage integrase family protein Pnap_4138 14028 - 14369 + | hypothetical protein Pnap_4139 14356 - 14679 + | putative transcriptional regulator Pnap_4140 15839 - 15183 - | OmpW family protein TERM 22 15309 - 15288 - G 78 -6.6 -4.59773 | CTTGACTTTCAAAAA CAGCTTCT GAACCG AGAAGCCG ATGCTGTAGCCATCC TERM 23 15878 - 15894 + r 70 -2.9 -4.71223 | overlap 15879 15880 15890 AAAAACGAACTTCAA TTGTCCA AAA TGGACGC TTTTGTCTCTTCTGA Pnap_4141 16846 - 15986 - | alpha/beta hydrolase fold Pnap_4142 17957 - 16917 - | 4-hydroxy-2-ketovalerate aldolase TERM 24 17499 - 17510 + g 76 -5.8 -4.58395 | TTGCATCAGCAGCGC CTGG CTCA CCAG TTTTTCCGGGCTGGC Pnap_4143 18889 - 17975 - | acetaldehyde dehydrogenase Pnap_4144 19692 - 18910 - | 4-oxalocrotonate decarboxylase TERM 25 19081 - 19129 + g 100 -13 -4.82901 | gap 1 GGCCACGGCATTGAC CGGCGAGCCCAGCGCGGC-GGCG CCGG CGCCGGTGGCGATGATCTCGCCG TTTTTCTCCAGCACC TERM 26 19338 - 19350 + g 83 -4.8 -5.00616 | CGTTGGTGACGCCGG GACC CATGA GGTC TTTTTTCAGGACGAA Pnap_4145 20391 - 19780 - | glutathione S-transferase domain-containing protein Pnap_4146 21301 - 20423 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 27 20914 - 20895 - G 71 -9.2 -3.72576 | TCGCCGGTCAGGAAA CCCGACAC CGCC GCGCCGGG CATGAACGGTTTTTC Pnap_4147 22142 - 21312 - | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase Pnap_4148 23411 - 22185 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 28 22581 - 22552 - G 78 -14.3 -3.05596 | gap 1 TAGGTCTCCAGCGAA CG-CTGACCGCCGC CCC GCAGCGGCCAGGCG GCCACGTCACCGGCG Pnap_4149 23737 - 23408 - | Rieske (2Fe-2S) domain-containing protein Pnap_4150 24256 - 23849 - | membrane protein, biphenyl pathway TERM 29 24230 - 24220 - G 93 -8.2 -5.1101 | overlap 24221 TGAGCAGGTAAAAAA CGCC CAC GGCG AGCAGAAATGTTCGA Pnap_4151 24861 - 24295 - | benzene 1,2-dioxygenase TERM 30 24742 - 24724 - G 70 -12.4 -3.14468 | TTCCAGCAGAGCGAA CCAGGCCT CGT AGGCCCGG TGGTCAAGCAACTGC TERM 31 24977 - 24987 + r 70 -6.8 -4.13767 | ATTCAACGATTGCGT CCCT ATC AGGG TTTTAGCGTGGCCCA Pnap_4152 26352 - 24982 - | ring hydroxylating dioxygenase, alpha subunit Pnap_4153 27178 - 26444 - | GntR family transcriptional regulator TERM 32 27265 - 27291 + r 74 -4.5 -4.8048 | GTGCGGATTGTTAGA TGTCGATATTG TAATC TACTATCGACA TTTTTGCTATAGGCG Pnap_4154 27766 - 27260 - | hypothetical protein Pnap_4155 28539 - 27988 - | hypothetical protein TERM 33 28572 - 28543 - H 75 -11.3 -3.35224 | overlap 28541 AGACGGCGGCAAACA GGGACCGGCCCAG GTCT CTGCGCCGAACCC ACCAAAGCCACAACG Pnap_4156 28650 - 29477 + | hypothetical protein TERM 34 29514 - 29490 - f 76 -12.8 -2.71364 | TGACCGGCTGAATCA GCGAGGGGGC GCAAT GCCCCCTCGA TACCGTAGGCACACG TERM 35 29562 - 29541 - f 100 -14.4 -4.35116 | opp_overlap 29554 CACGGCACAGCAAAA CGGCGGCC AGGCCA GGCCGCCG CGCGCCCATCCGTTC TERM 36 30158 - 30173 + F 100 -8.2 -5.85178 | opp_overlap 30158 TTTACGCGTTTCAAA CCCGGC CTGC GTCGGG TTTTTTTTCGCTCTT TERM 37 30483 - 30497 + F 72 -11.4 -3.09516 | GCTGTCAAGGTCTGC GCGCAC TGT GTGCGC TTGCGTCCTGGCGGC TERM 38 30917 - 30934 + G 81 -4.1 -5.0538 | opp_overlap 30908 AGGAATCGCTTGCGC TCAATGC GGCG GCAGTGA TTTTTTGCCATAACC Pnap_4157 30595 - 31101 + | DNA repair protein RadC TERM 39 31107 - 31121 + F 100 -12.8 -4.88407 | GCTGCTGTAGCCCGA GGGGGC ATC GCCCCC TTTTTGCTTCGCTCG TERM 40 31562 - 31532 - f 73 -10.3 -3.35224 | overlap 31530 AGACGGCGGCAAACA GGGACCGGCCCAG GGTCT CTGCGCCGAACCC AACCAAAGCCACAAC Pnap_4159 31719 - 33758 + | nuclease TERM 41 33801 - 33774 - f 91 -12 -4.08144 | gap 1, opp_overlap 33775 33777, overlap 33775 GGTAGCAATGACAAA TGGCCCCGGCGCA AAA TGCGCCGGGGT-A TTTTCTTGAAAAATC TERM 42 33801 - 33775 - f 84 -13.6 -3.04404 | opp_overlap 33775 33777, overlap 33774 GTAGCAATGACAAAT GGCCCCGGCGCA AAA TGCGCCGGGGTA TTTTCTTGAAAAATC TERM 43 33775 - 33801 + F 100 -15.8 -4.63932 | opp_overlap 33774 33775, overlap 33777 GTAGCAATGACAAAT GGCCCCGGCGCA AAA TGCGCCGGGGTA TTTTCTTGAAAAATC TERM 44 33777 - 33799 + F 100 -20.6 -3.93367 | opp_overlap 33774 33775, overlap 33775 AGCAATGACAAATGG CCCCGGCGCA AAA TGCGCCGGGG TATTTTCTTGAAAAA TERM 45 33842 - 33815 - f 100 -18.4 -4.57073 | overlap 33816 TATTTTCTTGAAAAA TCGGGCGCGGCA AGTG TGCCGCGCCCGG TCTAACAGCCGACAA TERM 46 33841 - 33816 - f 100 -21.9 -3.33922 | overlap 33815 ATTTTCTTGAAAAAT CGGGCGCGGCA AGTG TGCCGCGCCCG GTCTAACAGCCGACA TERM 47 33912 - 33872 - f 86 -6.6 -5.00884 | overlap 33878 33879 33880 AGCCCCCCCAAAAAA CCAAAAGCGCGCCCCGCC GTCAT GGCGGGGCGCCGAATCGA CAGGCACTCCGGCCC TERM 48 33905 - 33878 - f 100 -16.3 -4.86862 | gap 1, overlap 33872 33879 33880 CCCAAAAAACCAAAA GCGCGCCCCGCC GTCAT GGCGGGGCGC-C GAATCGACAGGCACT TERM 49 33905 - 33879 - f 100 -16.5 -3.5049 | overlap 33878 33872 33880 CCAAAAAACCAAAAG CGCGCCCCGCC GTCAT GGCGGGGCGCC GAATCGACAGGCACT TERM 50 33904 - 33880 - f 100 -20 -2.68667 | overlap 33878 33879 33872 CAAAAAACCAAAAGC GCGCCCCGCC GTCAT GGCGGGGCGC CGAATCGACAGGCAC TERM 51 34047 - 34064 + F 72 -11.3 -3.05384 | GCGCCGTCCATGATG CTGACGG TTGG CCGTCAG TTACATCACGAAGGA TERM 52 34710 - 34698 - g 80 -5.5 -4.69053 | opp_overlap 34705, overlap 34701 CAGCATGGAAGAAAA TCAGC CAG GCCGA GCGGCCTTACCTGTC Pnap_4161 34523 - 34831 + | hypothetical protein Pnap_4162 35174 - 34878 - | XRE family transcriptional regulator TERM 53 35497 - 35479 - H 80 -8.8 -4.13767 | CCCCGCAGCGGAAAA GTGCGCGA GTC TGGCGCAC GCCGCTTGCCGTCAA Pnap_4163 35617 - 35967 + | putative lipoprotein TERM 54 36002 - 35973 - f 100 -15.7 -3.524 | overlap 35949 CATCGACTGATAGAA CCGCATGGCCCGC TGCG GCGGGCCATCCAG GCGCTGCCGCCTCCG TERM 55 36090 - 36074 - f 72 -12.3 -2.67209 | CATCAATCCAGACTA TGCACCG CAG CGGTGCA AACACGACCCAAACA TERM 56 36548 - 36511 - g 81 -15.5 -3.01712 | gap 1, opp_overlap 36515 GCGCCTGCTGGAAGA TCCCGGCCAGGATGCGCG GGA CGCGCACCC-GGCCTGGT TCCCCGACCACGATA TERM 57 36515 - 36544 + G 78 -15.7 -2.70932 | gap 1, opp_overlap 36511 CTGCTGGAAGATCCC GGCCAGGATGCGCG GGA CGCGCACCC-GGCC TGGTTCCCCGACCAC TERM 58 36908 - 36930 + G 70 -9.9 -3.53811 | gap 1, opp_overlap 36892 36890, overlap 36912 ACCCTACAGGCGCTC GACGGCACCC TGGC GGGTGC-GTC TTTGCGCACGGTGGC TERM 59 37076 - 37042 - g 100 -17.9 -4.59853 | gap 1 GCAACGCGGGAAAAA GCTGATGCGCGGCGGC TATC GCCGCCTCGCA-CAGC TTCCGCCGCTTGAGC Pnap_4164 36329 - 37126 + | hypothetical protein Pnap_4165 37211 - 37513 + | hypothetical protein TERM 60 37995 - 37982 - g 71 -8.1 -3.91716 | overlap 37984 37985 CGATCCGGGAAACAA CAGGC AGAC GCCTG CACCGCTTCTCGTGG Pnap_4166 37549 - 38400 + | putative replication initiator and transcription repressor protein TERM 61 38700 - 38678 - g 80 -4.7 -4.8622 | overlap 38679 38697 TTGCTCAACCAAAAA GGCGGGGTC GGCAA GACCACGCT CGCCACCCACATCGC Pnap_4167 38651 - 39289 + | cobyrinic acid a,c-diamide synthase Pnap_4168 39286 - 39528 + | hypothetical protein TERM 62 39570 - 39559 - g 70 -7.2 -4.0342 | overlap 39560 TCCAACCAACAACAA GCGC GGCT GCGC CACCGCCATCGCTGC TERM 63 39885 - 39854 - g 70 -13 -2.87344 | gap 1 CATTCCCGGCATACA CCCCGGCGCGC-GCA TCC TGCTGCACGCCGAAG GTGAACGACAGGTGC Pnap_4169 39525 - 40070 + | hypothetical protein Pnap_4170 40067 - 40618 + | putative conjugal transfer TRAF transmembrane protein TERM 64 40990 - 40969 - f 78 -12.3 -3.19026 | gap 1 CAGGGCAAGATTGAA GGGTCCGGCA CGC TGCCGG-CCC ATAAGCGAGTCTGCA TERM 65 41014 - 41030 + F 71 -10.1 -3.53224 | overlap 41016 GTCTGCACGTGGGGT TGGCGCG GCA CGCGCTA TTTGGCGGCACCGTG TERM 66 41016 - 41028 + F 73 -10.5 -3.34398 | overlap 41014 CTGCACGTGGGGTTG GCGCG GCA CGCGC TATTTGGCGGCACCG Pnap_4171 41133 - 43094 + | hypothetical protein TERM 67 43250 - 43229 - f 100 -15.9 -3.75332 | opp_overlap 43229 AGGCGCGAATCGAAA GGGCCAGAG TTCT CTCTGGCCC TTTTCACGTTTGCTG TERM 68 43229 - 43250 + F 100 -15.9 -4.25074 | opp_overlap 43229 AGGCGCGAATCGAAA GGGCCAGAG TTCT CTCTGGCCC TTTTCACGTTTGCTG Pnap_4172 43455 - 44072 + | TetR family transcriptional regulator TERM 69 44533 - 44520 - g 77 -2.3 -5.03145 | overlap 44508 GAAGCCGCTAAAAAA GCAGC CGTA GCCAC CAAGGAAGCTGCACA TERM 70 44578 - 44562 - g 76 -10.8 -3.71991 | overlap 44553 CAGAAAGCCGAAGAA GCCGCC AAAAA GGCGGC CAAATCTGGCAAAGA Pnap_4173 44142 - 44729 + | late embryogenesis abundant protein TERM 71 44732 - 44760 + F 95 -12.5 -4.09739 | opp_overlap 44731 44730, overlap 44733 CGTGACGAAGTAACC CTTATCGGGCAGG CTG CTTGCCCGATAAA TTTTCACAGCGTTGC TERM 72 44733 - 44759 + F 93 -16 -3.05522 | opp_overlap 44731 44730, overlap 44732 GTGACGAAGTAACCC TTATCGGGCAGG CTG CTTGCCCGATAA ATTTTCACAGCGTTG TERM 73 44998 - 44969 - g 74 -4.9 -4.56597 | gap 1, overlap 44970 44977 CGGCCTTCGGAAAAA CCTG-AAGACGGCC CAA GGCCGACTTGCCGA GTTCGAGGCCACCGC Pnap_4174 44817 - 45263 + | hypothetical protein TERM 74 45385 - 45410 + F 78 -6.2 -4.82901 | gap 1, opp_overlap 45383, overlap 45389 CGATGAGGTAACAGC TATC-GCAGCC ACCAG GGCTGCTGGTA TTTTTATGCGCGGCA Pnap_4175 45476 - 46177 + | hypothetical protein Pnap_4176 46177 - 47925 + | hypothetical protein TERM 75 48058 - 48040 - g 71 -13.8 -2.52464 | TGGTGCGGCAACGCA GCCGGGCG CGG CACCCGGC TTCGGACGTGCCAGC TERM 76 48902 - 48882 - g 74 -4.6 -4.56775 | gap 1 ATGGCGCTGCAAAAA CGCCTGCCG GAGC CGGT-GGCG CTGAAGGTCTGCGGC TERM 77 49137 - 49190 + G 73 -10.7 -3.53811 | GGCGAGCTGGCGGCC GCCGTGCTGGCCGACCCGCAGCGGC AGGC GGCGATGCGCCACGCCCAGCACGCC TTTCACGACAGTGCC Pnap_4177 47922 - 50582 + | glycosyltransferase family 28 protein Pnap_4178 50579 - 51550 + | patatin Pnap_4179 51543 - 52352 + | hypothetical protein TERM 78 52854 - 52809 - g 72 -14 -2.71791 | gap 2, overlap 52808 52837 AGGTGCGCCTGAAAT TCGAGGCCGCGCGCGAGGCCCG TAAC CAGGCG-CGCGC-CGGTCTCGA CACGGCGCTGGCCCA Pnap_4180 52349 - 53449 + | RND family efflux transporter MFP subunit TERM 79 53492 - 53512 + G 72 -2.5 -4.73613 | overlap 53494 GCCTGGCGAATCTCT TTGTCACCT CCA AGCTGACCA TTTTGTTCATGCTGG TERM 80 54161 - 54141 - g 79 -9 -4.14472 | gap 1, opp_overlap 54140 54141 GCAACAGGGCCAAAA CCG-CCAGG TGTT CCTGGACGG CTTTCTCAGCTCGGC TERM 81 55482 - 55455 - g 70 -10 -3.62522 | gap 1, overlap 55473 CAACCTGCTGAACAA GGCTGATCGAAGT AAG ACCTCGAT-AGCC ATCGTGCGCGAATTG TERM 82 56588 - 56611 + G 74 -5.2 -4.57569 | TGAGCGACCCGGTGT TCGGCGGGCT GGCA ATCTCGCTGA TTTTTGGCACGCTGG Pnap_4181 53446 - 56727 + | acriflavin resistance protein TERM 83 57319 - 57295 - g 78 -9.9 -4.08216 | opp_overlap 57280 57278 GCATGGTGGCCAAAA GCGACCTGCTC TCT GTGCAGGTGGC CCTGGCCGATGCGCG Pnap_4182 56724 - 58019 + | outer membrane efflux protein Pnap_4184 59330 - 58305 - | helix-turn-helix domain-containing protein TERM 84 60262 - 60242 - g 77 -3.8 -4.87807 | overlap 60243 GGAAGACATGAAAAA CCGTGGCG ACCTG CGCCCCGT CACCCTCTTATTCGG TERM 85 60942 - 60959 + G 76 -8.3 -4.15453 | opp_overlap 60932 TACGACGTACTCGCC GCCCGGG CCGG CACGGGC TTTTGGCATCACTTG Pnap_4185 59556 - 61814 + | oxidoreductase FAD/NAD(P)-binding subunit TERM 86 62455 - 62472 + G 77 -12.7 -3.61398 | GCAGTTCCACGACGC CGCTCGC CGAG GCGAGCG TTGTTCCACGGCAGC Pnap_4186 61877 - 63517 + | glucose-methanol-choline oxidoreductase TERM 87 63656 - 63639 - g 73 -11.3 -3.6422 | overlap 63637 GAGGCGTCGAAAAGA CGACCTG GAGC CAGGTCG AATGCAATGCACGAC Pnap_4187 63521 - 65158 + | AMP-dependent synthetase and ligase Pnap_4188 65158 - 66897 + | aldehyde dehydrogenase Pnap_4189 66988 - 67698 + | OmpW family protein Pnap_4191 68268 - 69179 + | LysR family transcriptional regulator Pnap_4192 69191 - 69433 + | hypothetical protein TERM 88 69541 - 69567 + F 79 -2.9 -5.24796 | gap 1, opp_overlap 69541, overlap 69542 ACAAATCGCCATACA CGCCGCAACGCG CAGC CGC-TTGCAGCA TTTTTCTTGTCTACG TERM 89 70083 - 70071 - g 71 -4.7 -4.44046 | opp_overlap 70073 70077, overlap 70072 CCGATGCCAAAGAAA TCCGC AAG GCGGG ATTGACCAATCCAGC Pnap_4193 69719 - 71710 + | TRAG family protein TERM 90 71834 - 71782 - g 71 -5.4 -4.41348 | CTGGCCGCAAAGAAA GGCG-TGTCCAAGTCGTCCATCGTCG CGG CGGCGCTGG-CGTCCTGGCTATCGCC GGACGCTGGCGACCA Pnap_4194 71707 - 72159 + | CopG/DNA-binding domain-containing protein TERM 91 72168 - 72147 - f 72 -11.5 -3.10056 | overlap 72104 AGCAGCGATGCAAGA GGACGGAGC ATGA GCGCCGTCC TGAAAGACCAGCCGC Pnap_4195 72156 - 73187 + | type II secretion system protein E Pnap_4196 73184 - 73543 + | conjugal transfer protein TrbC TERM 92 73626 - 73678 + G 77 -14.1 -3.26471 | gap 3, opp_overlap 73619, overlap 73627 CGAACCGATCCTGCT GGGCGGCGCGCC-GCGCACCG-TGGC GATC GCCAACGGGACGCTGGC-CGCCGCCG TTGGTCTGGGCCTGC TERM 93 73627 - 73677 + G 83 -17.6 -2.55668 | gap 3, opp_overlap 73619, overlap 73626 GAACCGATCCTGCTG GGCGGCGCGCC-GCGCACCG-TGGC GATC GCCAACGGGACGCTGGC-CGCCGCC GTTGGTCTGGGCCTG Pnap_4197 73540 - 73824 + | putative conjugal transfer TrbD transmembrane protein TERM 94 74289 - 74271 - g 74 -12.4 -3.40403 | GCTGCTGTACGAGAA CACGCCAC AGC GCGGCGTG GACTGGCGCGAGCGG Pnap_4198 73846 - 76287 + | AAA ATPase Pnap_4199 76284 - 77012 + | putative conjugal transfer TrbJ signal peptide protein TERM 95 77991 - 77964 - g 71 -13.4 -2.60496 | gap 1, overlap 77961 GGGTGCCGCAAAGAT GGCC-GCGAGCGG TGC CCGCTCGATGGCC TCGACCGCCAGCAGC Pnap_4200 77023 - 78396 + | TrbL/VirB6 plasmid conjugal transfer protein Pnap_4201 78409 - 79113 + | conjugal transfer protein Pnap_4202 79110 - 80123 + | conjugal transfer protein TrbG/VirB9/CagX Pnap_4203 80126 - 81445 + | conjugation TrbI family protein Pnap_4204 81442 - 81711 + | hypothetical protein TERM 96 81734 - 81766 + T 80 -9.3 -4.11216 | gap 1, overlap 81734 81741 81742 CACAGCCAAGCACCC T-TGAACGCGCAGT CTCCGA ACTGCGCGTTCGCA TTTTGGGGATCAGCC Pnap_4205 82612 - 82262 - | hypothetical protein Pnap_4206 83067 - 82654 - | hypothetical protein Pnap_4207 83589 - 83134 - | hypothetical protein TERM 97 83504 - 83519 + g 85 -3.3 -5.26316 | TTTTGGTCATGAATC CCAAT CGGAAA ATTGG TTTTTTGTCGCGTAA Pnap_4208 84173 - 83904 - | hypothetical protein TERM 98 84808 - 84819 + H 74 -4.4 -4.72486 | CGCTCGGCATCTTCA CAAC AGCC GTTG TTTTTGGAATTTCTA TERM 99 85152 - 85107 - H 81 -11.9 -3.57561 | gap 1, opp_overlap 85105 TGCTAATTTTTGAAA TCTTCCT-TCTTCAACCCCCGC CAT GCGGGGATTGAAGCTAGGTGGA CATGGTCTGCGGGTT TERM 100 85378 - 85406 + H 86 -10.3 -4.10085 | opp_overlap 85380 85393, overlap 85380 85383 ATGAATTTCATCACC AACCCGCAGGGAT AAC ATCCTTGTGGGTG TTTCCTTGCTTTTTC TERM 101 85380 - 85404 + H 85 -12.9 -3.61541 | opp_overlap 85380 85393, overlap 85378 85383 GAATTTCATCACCAA CCCGCAGGGAT AAC ATCCTTGTGGG TGTTTCCTTGCTTTT TERM 102 85383 - 85415 + H 91 -10 -4.56597 | gap 1, opp_overlap 85380 85393, overlap 85380 85378 TTTCATCACCAACCC GCAGGGATAACATCC TTGT GGGTGTT-TCCTTGC TTTTTCAAGGAAACG Pnap_4209 85400 - 85678 + | hypothetical protein Pnap_4210 85689 - 85958 + | hypothetical protein TERM 103 86838 - 86828 - g 76 -6.8 -4.4261 | GCCGGAATACCAAAA TGCG TAC CGCA AAATGCCCGACCACA Pnap_4211 86109 - 86990 + | hypothetical protein TERM 104 87010 - 87037 + F 100 -18.6 -3.27298 | opp_overlap 87010 87017, overlap 87017 ATATATCCATCAAAA CGAAAAAGCGGC CCAG GCCGCTTTTTCG TTCCTGATTGAAAAC TERM 105 87037 - 87010 - f 100 -18.6 -4.3014 | opp_overlap 87010 87017, overlap 87017 ATATATCCATCAAAA CGAAAAAGCGGC CCAG GCCGCTTTTTCG TTCCTGATTGAAAAC TERM 106 87017 - 87030 + F 100 -9.5 -4.90869 | opp_overlap 87010 87017, overlap 87010 CATCAAAACGAAAAA GCGGC CCAG GCCGC TTTTTCGTTCCTGAT TERM 107 87030 - 87017 - f 100 -9.5 -5.1166 | opp_overlap 87017 87010, overlap 87010 CATCAAAACGAAAAA GCGGC CCAG GCCGC TTTTTCGTTCCTGAT Pnap_4212 87439 - 87819 + | hypothetical protein TERM 108 88333 - 88305 - g 90 -8.9 -4.84359 | opp_overlap 88307, overlap 88307 TCAGGCTCAGAAAAA CAGGTACCAGC CTGAACT GCTGGTACCTT TGTTCAGGATCAAAT TERM 109 88307 - 88331 + G 84 -11.5 -4.16842 | opp_overlap 88305 88307 AGGCTCAGAAAAACA GGTACCAGC CTGAACT GCTGGTACC TTTGTTCAGGATCAA TERM 110 88331 - 88307 - g 82 -11.5 -4.04397 | opp_overlap 88307, overlap 88305 AGGCTCAGAAAAACA GGTACCAGC CTGAACT GCTGGTACC TTTGTTCAGGATCAA Pnap_4213 87892 - 88443 + | hypothetical protein TERM 111 88505 - 88447 - f 100 -8.9 -5.04597 | gap 2, opp_overlap 88461 88502, overlap 88448 88460 88461 AGCCACACATAAAAA TTGTGCTGTTAAAGGGCAGGGCGCGAGGT AAC ACCTCGCGCCCTGGCTTTTC-CA-CTCAG CCATGAAAAGCTGAT TERM 112 88504 - 88448 - f 83 -12.4 -3.61674 | gap 2, opp_overlap 88461 88502, overlap 88447 88460 88461 GCCACACATAAAAAT TGTGCTGTTAAAGGGCAGGGCGCGAGGT AAC ACCTCGCGCCCTGGCTTTTC-CA-CTCA GCCATGAAAAGCTGA TERM 113 88494 - 88460 - f 100 -20 -3.53343 | opp_overlap 88461, overlap 88448 88447 88461 AATTGTGCTGTTAAA GGGCAGGGCGCGAGGT AAC ACCTCGCGCCCTGGCT TTTCCACTCAGCCAT TERM 114 88461 - 88493 + F 100 -23.5 -4.13767 | opp_overlap 88460 88448 88447 88461 ATTGTGCTGTTAAAG GGCAGGGCGCGAGGT AAC ACCTCGCGCCCTGGC TTTTCCACTCAGCCA TERM 115 88493 - 88461 - f 100 -23.5 -2.71791 | opp_overlap 88461, overlap 88460 88448 88447 ATTGTGCTGTTAAAG GGCAGGGCGCGAGGT AAC ACCTCGCGCCCTGGC TTTTCCACTCAGCCA TERM 116 88553 - 88515 - f 71 -6.1 -4.28548 | opp_overlap 88502 88520, overlap 88550 ACTCAGCCATGAAAA GCTGATTTACCAAAGCA TATTC TGCTTTGTTAAATTTGC CCGGCCAGGCAATCA TERM 117 88756 - 88770 + G 74 -5.6 -4.50058 | opp_overlap 88756, overlap 88758 GGATCAATGAGTTAA TTGCGC GGG GCGCTA TTTTCGTTGTCAATC TERM 118 88758 - 88768 + G 71 -8.2 -3.85296 | opp_overlap 88756, overlap 88756 ATCAATGAGTTAATT GCGC GGG GCGC TATTTTCGTTGTCAA TERM 119 88832 - 88851 + G 82 -5.8 -4.9218 | gap 1 TCACTTCATTACTGA TCTGG-TTC CGA GAAGCCAGA TTTTTGTAGTGCATG Pnap_4214 88638 - 89492 + | phosphoadenosine phosphosulfate reductase TERM 120 89566 - 89520 - f 100 -13 -4.25676 | opp_overlap 89533 89550 89554 89565, overlap 89521 AACGAAACTTTAAAA CCTGAACGGCCAAGTGCAACCT CTC AGGTTGCACTTGGCTGACTAGC CAATGCTTTCCCATG TERM 121 89565 - 89521 - f 100 -16.5 -3.14321 | opp_overlap 89533 89550 89554, overlap 89520 ACGAAACTTTAAAAC CTGAACGGCCAAGTGCAACCT CTC AGGTTGCACTTGGCTGACTAG CCAATGCTTTCCCAT TERM 122 89533 - 89553 + F 91 -14.1 -3.07816 | opp_overlap 89521 89520, overlap 89550 AACCTGAACGGCCAA GTGCAACCT CTC AGGTTGCAC TTGGCTGACTAGCCA TERM 123 89970 - 89992 + F 76 -5.5 -4.72272 | overlap 89971 89972 TGAGTTAAATCTGGA ATGGCCATG ATCAA CATGGCCGC TTTTTAATACCCAGC TERM 124 90032 - 90071 + F 90 -13 -3.79445 | opp_overlap 90020, overlap 90020 90066 AAACCTCCCTCGAGA GGCTTTCTATTGGCTTGA CACA TCAGACCAACAGAAAGCC TTTGGCTTAATCCTT TERM 125 90647 - 90671 + G 85 -5.7 -5.02074 | opp_overlap 90653, overlap 90648 AATCCAATGATTCCT ATAAAAGGCTG ATG CTGCCTTTTAA TTTTTTACAACGTCA Pnap_4215 90124 - 91254 + | hypothetical protein TERM 126 91297 - 91279 - f 93 -8.9 -4.74103 | opp_overlap 91279 TTTTCAACCCAAAAA GCCACTT TTGAG AAGTGGC TTTTTTATTTAAAAG TERM 127 91279 - 91297 + F 100 -9.6 -5.63517 | opp_overlap 91279 TTTTCAACCCAAAAA GCCACTTT TGA GAAGTGGC TTTTTTATTTAAAAG Pnap_4216 91321 - 91683 + | hypothetical protein TERM 128 91708 - 91719 + F 100 -5.8 -5.4505 | opp_overlap 91708 AGCACTTGTCTGAAA CCAC CTTG GTGG TTTTTTATTAACGCC TERM 129 92049 - 92060 + G 72 -4.4 -4.56597 | ACATCACCATTGATC CGAT GAAT ATCG TTTTTGGCGACAACC Pnap_4217 91757 - 92275 + | hypothetical protein TERM 130 92315 - 92332 + F 84 -6.2 -5.1356 | opp_overlap 92315 GTCTTAGAAAATTAC CGCCCC TCGATT GGGGTG TTTTTATTGGTGAAA Pnap_4218 92352 - 92660 + | hypothetical protein Pnap_4219 92721 - 93107 + | hypothetical protein TERM 131 93111 - 93143 + F 100 -5.4 -5.83822 | opp_overlap 93111 93112, overlap 93112 93113 ATCGACATTTGAAAA CTCCCCCACACTGG CTTGT TCGGTGCGGGGGGA TTTTTTTTGCCTGTA TERM 132 93112 - 93142 + F 80 -8.9 -4.08666 | opp_overlap 93111 93112, overlap 93111 93113 TCGACATTTGAAAAC TCCCCCACACTGG CTTGT TCGGTGCGGGGGG ATTTTTTTTGCCTGT TERM 133 93307 - 93297 - g 91 -3.2 -5.42862 | AGAGTTGCAAAAAAA GTCC GAG GAAC TGAAAAAAAAGAATC Pnap_4220 93235 - 93642 + | histone family protein nucleoid-structuring protein H-NS TERM 134 93962 - 93939 - f 74 -11 -3.21416 | overlap 93954 GAGCCTTAGCATGAA GACCGGGAAT CAGA ATCCCCGGCC TTCAGGCCGGGGAGC TERM 135 93975 - 93954 - f 100 -17.3 -3.51329 | overlap 93939 GACCGGGAATCAGAA TCCCCGGCC TTCA GGCCGGGGA GCAGTCAACAAGTAC TERM 136 94331 - 94311 - g 95 -11.1 -4.56597 | CGTCTCTCGTAAAAA GGTGGCTGC TCG GCACCCACC AGGGCTCTTTCAGTG TERM 137 94533 - 94504 - g 74 -5.6 -4.44974 | overlap 94494 94506 CCAAACCCCACAAAA GCGGGGCAAGTC CGACCT GAGCCACCCCGC ACTGGCAGGACTGCG Pnap_4221 94256 - 94705 + | hypothetical protein Pnap_4222 95140 - 94730 - | hypothetical protein TERM 138 95199 - 95170 - R 70 -10.1 -3.33696 | gap 1, overlap 95172 TCTGCCTTTAAGCAA CATCAGTCGCAACA CGC TGGTGCGACTGA-G ATCGCCATTAGACCT TERM 139 95198 - 95172 - R 87 -13.8 -3.23853 | overlap 95170 TGCCTTTAAGCAACA TCAGTCGCAACA CGC TGGTGCGACTGA GATCGCCATTAGACC Pnap_4223 95870 - 95172 - | hypothetical protein TERM 140 95228 - 95238 + g 80 -4.6 -4.87786 | overlap 95224 95221 CTGAACCCGAAGCAT GGCG TGC TGCC TTTTTCTGAAGTTGG TERM 141 95910 - 95930 + H 95 -5.5 -5.40072 | overlap 95906 AATCAGGAAAACGGC CAAATAAGG CTG CATTATTTG TTTTTTTGAAAGCGC Pnap_4224 96004 - 96990 + | type II secretion system protein E Pnap_4225 96962 - 97282 + | hypothetical protein Pnap_4226 97293 - 97607 + | hypothetical protein Pnap_4227 97607 - 100072 + | Type IV secretory pathway VirB4 components-like protein TERM 142 100337 - 100325 - g 78 -3.3 -5.05505 | ATGACAAAGTAAAAA GGGTC TAT GACTC CGCAAATGCCTTGCA TERM 143 100571 - 100553 - g 84 -3.8 -5.14965 | overlap 100568 ACCGGCACCAAAAAA TTGTTGAC CAA GCCAGCAA CGTGAGTGGCGTCAC Pnap_4228 100075 - 100788 + | hypothetical protein TERM 144 101888 - 101863 - g 77 -12.5 -3.55071 | GCAGATCCGGCGAAA GCTGCCCTGGC GACA GCCAAGGCGGC AGCAAACCCTGGGAA Pnap_4229 100795 - 102018 + | hypothetical protein TERM 145 102092 - 102069 - f 100 -16.8 -3.06037 | opp_overlap 102069, overlap 102062 102071 ACGGCAAACCACACA TAGGCGGCCT AATT AGGCCGCCTA TTTTCTTGGGAAAAG TERM 146 102069 - 102092 + F 100 -16.8 -4.63218 | opp_overlap 102069 102062 102071 ACGGCAAACCACACA TAGGCGGCCT AATT AGGCCGCCTA TTTTCTTGGGAAAAG TERM 147 102090 - 102071 - f 91 -15 -3.08344 | opp_overlap 102069, overlap 102069 102062 GGCAAACCACACATA GGCGGCCT AATT AGGCCGCC TATTTTCTTGGGAAA Pnap_4230 102231 - 102842 + | hypothetical protein Pnap_4231 102875 - 103348 + | putative lipoprotein TERM 148 104307 - 104280 - g 80 -4.8 -4.89477 | gap 1, opp_overlap 104286, overlap 104255 104283 104284 104285 CCTTGAAGAAGAAAA CAAGCGCCTCACG CGC CGCGTGACG-TTG GTTGTGGATCAGTTC TERM 149 104295 - 104283 - g 76 -6.2 -4.54297 | opp_overlap 104286, overlap 104255 104280 104284 104285 TGAAGAAGAAAACAA GCGC CTCAC GCGC CGCGTGACGTTGGTT Pnap_4232 103411 - 105033 + | lipoprotein Pnap_4233 105034 - 106392 + | hypothetical protein Pnap_4234 106379 - 107233 + | hypothetical protein Pnap_4235 107238 - 109205 + | type II secretion system protein E TERM 150 109278 - 109245 - g 72 -2.3 -4.77036 | opp_overlap 109252 109254 109255 CGGTAGGAGGAAAAA TAACCTTTTCCGGAG TGCT CTCCGATATTGGTCA GTTTTTTAAAATCTT Pnap_4236 109205 - 110419 + | putative general secretion pathway protein TERM 151 110444 - 110465 + F 100 -11.5 -6.22802 | TCATGCAGACCTATC GCCGCCACT TGCC AGAGGCGGC TTTTTTTTTGTGCGG Pnap_4237 110651 - 111295 + | hypothetical protein TERM 152 111561 - 111549 - g 79 -9.1 -4.21676 | AGAATTGATCGAAAA GCCCA AGA TGGGC GAGACGATTCAATGG Pnap_4238 111292 - 112134 + | conjugal transfer protein TrbG/VirB9/CagX TERM 153 112853 - 112840 - g 75 -4.5 -4.80178 | GAGGAAGCAACAAAA CTCGC ACCC GCAAG AGCTGCAGCGGCTTT TERM 154 112939 - 112923 - g 71 -9.3 -3.70033 | CATCAACACAGACAA CCCAGGC ACG GCCAGGG GTAGGGTGCGCAGTG TERM 155 113131 - 113096 - g 79 -9.1 -4.19238 | TCCCGAACGGTAAAA GCATGTC-GCTGTCTGG CACG CCGG-CAGCAGACATGC AAGGCGCCAGCGGCA TERM 156 113259 - 113241 - g 71 -6 -4.34771 | opp_overlap 113240 GAAAAGTCAGCAAAA CGTGTC CATTTCT GACACG GTATCTGGTGGCAGC Pnap_4239 112141 - 113439 + | conjugation TrbI family protein Pnap_4240 113436 - 113771 + | hypothetical protein Pnap_4241 115505 - 113838 - | superfamily I DNA/RNA helicase-like protein Pnap_4242 115958 - 115527 - | hypothetical protein TERM 157 116198 - 116152 - H 70 -6.5 -4.14243 | gap 1, opp_overlap 116152, overlap 116153 GAGTTCACTTCAAAA GGTC-AGCCCAATTGGCGGCCT AATT AGGCCGCCATTCGCGCTCGAAT ACCTCCCTGATTTTG Pnap_4243 116229 - 116765 + | lytic transglycosylase, catalytic TERM 158 116781 - 116825 + T 84 -13.8 -3.04398 | gap 1, opp_overlap 116787 116794, overlap 116781 116824 CTCGGTGGGGAGTGG CATCA-ACGTCAAAGCGACCT AATT AGGTCGCTTTGACGTATGACC GTTTTGCGCAAAAAA TERM 159 116781 - 116826 + T 100 -13.6 -4.07687 | gap 2, opp_overlap 116787 116794, overlap 116781 116824 CTCGGTGGGGAGTGG C-ATCA-ACGTCAAAGCGACCT AATT AGGTCGCTTTGACGTATGACCG TTTTGCGCAAAAAAT TERM 160 116818 - 116787 - T 100 -21.8 -3.15544 | opp_overlap 116781 116781, overlap 116794 GGGGAGTGGCATCAA CGTCAAAGCGACCT AATT AGGTCGCTTTGACG TATGACCGTTTTGCG TERM 161 116811 - 116794 - T 79 -11.3 -3.67976 | opp_overlap 116781 116781, overlap 116787 GGCATCAACGTCAAA GCGACCT AATT AGGTCGC TTTGACGTATGACCG Pnap_4244 118330 - 117029 - | initiator RepB protein TERM 162 118738 - 118754 + r 74 -2.3 -5.10029 | GGGATTTTGTGAAGG TATCC GTTTATG GGATA TTTTTTGACCTTACT Pnap_4245 119311 - 118850 - | hypothetical protein TERM 163 119204 - 119185 - G 78 -10 -4.07687 | gap 1, opp_overlap 119196 119197 119200, overlap 119186 AGTCGCCTGTCAAAA CCTTCGCCC GGC GGGCG-AGG CTCTGGAATCGAGCC TERM 164 119197 - 119225 + g 71 -13.9 -2.57683 | opp_overlap 119185 119186, overlap 119196 119200 AAACCTTCGCCCGGC GGGCGAGGCTC TGGAATC GAGCCTCGTCC ATTGTCACAGCGTCT TERM 165 120064 - 120104 + H 95 -15 -3.55203 | opp_overlap 120076, overlap 120065 TTGGTGAGGGCTGGA TTTGCAGGAAAACAAATG CCATC CATTTGATTTCCTGCAAG TTTCGACGAGGTTTT TERM 166 120065 - 120103 + H 90 -16.3 -2.7264 | opp_overlap 120076, overlap 120064 TGGTGAGGGCTGGAT TTGCAGGAAAACAAATG CCATC CATTTGATTTCCTGCAA GTTTCGACGAGGTTT Pnap_4246 120157 - 120969 + | hypothetical protein TERM 167 120963 - 120947 - T 73 -9.4 -3.84406 | opp_overlap 120953 CGGCTACGAGAACAA CGCCGA TGTCG TCGGCG CGATGAACATATTTG Pnap_4247 122119 - 121145 - | parB-like partition proteins TERM 168 121807 - 121848 + g 78 -11.9 -3.76224 | gap 2, opp_overlap 121782 121802 121803 121816, overlap 121841 121843 121844 CGTCAATGAATCCGG TGGCAGACATCATCTGACC TCCACT GGTCAG-TGATGT-TGCCA TTTCATCAATGGCAG TERM 169 122072 - 122045 - G 71 -11.2 -3.41693 | TGGATCACCAATTAA GGTCGAGCCCGC CGCA GCTGCCTCGACC TGGGCCACTCGATCG Pnap_4248 122787 - 122119 - | ATPase involved in chromosome partitioning-like protein Pnap_4249 123628 - 123239 - | transposase, IS4 family protein TERM 170 123269 - 123282 + g 100 -3.8 -5.47399 | overlap 123247 123246 TGTAGCGGTGTCGGT CCAG GACGCG CTGG TTTTTTTGCGGTTGA Pnap_4250 123868 - 123668 - | putative transposase TERM 171 123793 - 123770 - G 100 -8.8 -5.28942 | gap 1, opp_overlap 123776 123776 CAGGGCAAAGAAAAA CGTCCTGTGCG CCC CGC-CAGGGCG ACCTTTGCACGGTGG Pnap_4251 125946 - 124072 - | phage integrase family protein TERM 172 124511 - 124524 + g 71 -8.1 -3.88559 | opp_overlap 124509 124510 124511 TGCACATACAAAACC CAGCC CTCG GGCTG TTTGTCAAAATCCTT TERM 173 125670 - 125706 + g 74 -9.5 -3.87815 | gap 1, opp_overlap 125660 AAAACGCCACCGTCT TCGGCTTGACGG-TCA GCCCGA TGAGCCGCCAGGCCGA TTTCTCGCCATGACG TERM 174 126035 - 126025 - R 100 -2.4 -6.07627 | ATCGCCAAAAAAAAA GTGC CAA GCGC CGTTCATTCACATAA TERM 175 126187 - 126209 + r 84 -9.3 -4.31692 | ATGCGGGGAACATTT TTGTGTGAA AGGAC TTCACACAA TTTTGGTACTGGATT Pnap_4252 126839 - 126243 - | hypothetical protein TERM 176 126995 - 126985 - g 91 -3.2 -5.44119 | CGTAGGTGAAAAAAA CAAC GTG GCTG GTTGCCTGGATCGGC Pnap_4253 126975 - 128513 + | sigma-54 factor interaction domain-containing protein Pnap_4254 128725 - 129060 + | hypothetical protein Pnap_4255 129168 - 129890 + | von Willebrand factor, type A Pnap_4256 130056 - 130607 + | hypothetical protein Pnap_4257 130614 - 132041 + | protein kinase Pnap_4258 132049 - 135375 + | superfamily I DNA/RNA helicase Pnap_4259 135362 - 136801 + | hypothetical protein TERM 177 138300 - 138329 + G 78 -6.4 -4.61231 | gap 1, overlap 138288 AGTTGCAGCTCTTCG TGGGCGGCCTGGC CATGA GCCAG-CTGCACA TTTTTCAGGGTATCA Pnap_4260 136931 - 139267 + | hypothetical protein TERM 178 140898 - 140914 + G 70 -7.2 -3.97947 | GGATCAGGCCAAACT GCTGGC CAAAT GCCGGC TTTGTGGTCAATCCG Pnap_4261 139264 - 141159 + | hypothetical protein Pnap_4262 143667 - 141166 - | hypothetical protein TERM 179 141660 - 141694 + g 72 -4.3 -4.59853 | opp_overlap 141645, overlap 141661 TGCGCAGTTTCAGCG CCTGGGCGGA-CCCCAA GCC TTGGGAATCCGCC-AGC TTTTTGCAAAGTTCG TERM 180 142430 - 142400 - G 70 -7.4 -4.03234 | GGCGGGTGAGAGAAA GCGCCGAGCCGAAA GCG CTTGGGCACGGTGC CAGTGCTGCCTGGAA Pnap_4263 145226 - 143664 - | hypothetical protein Pnap_4264 149353 - 145574 - | SNF2-related protein TERM 181 147640 - 147652 + g 72 -2.6 -4.78107 | CCAGCGCGACGATCA TGGC CTGCC GCCG TTTTTCCTCGTAATC TERM 182 147848 - 147868 + g 75 -4.5 -4.7173 | opp_overlap 147833 GGGCAGCTCCACCGC GCTCTTGCC TGC GGCTTGGGC TTTTTGCGTCTGGTC Pnap_4265 151158 - 149350 - | hypothetical protein Pnap_4266 151865 - 151158 - | hypothetical protein TERM 183 151845 - 151873 + g 71 -5.2 -4.45068 | CGAGCCTCGCCGGGT GCGAGCGCGTGA GCCGA TCATGCGATGGC TTTCTTCTTGGGCGT Pnap_4267 154312 - 151862 - | hypothetical protein TERM 184 152934 - 152946 + g 82 -3.3 -5.1848 | TCGTTGATGCTGTCT TGGCG CTG CTCCA TTTTTTCGATTGATT Pnap_4268 156239 - 155091 - | DNA-repair protein TERM 185 155508 - 155537 + g 79 -10.7 -3.85698 | gap 1, opp_overlap 155481 155504, overlap 155506 155503 GATAAACACCAGCAC CTG-GCCGGCCAGG CTG CCTTGCTGGCGCAG TTTGTGCGCCGCCCG TERM 186 156808 - 156797 - R 75 -5.8 -4.61873 | GTGCACAAATCAAAA TCCG AAAA CGGA CGGATTTTTAGACTC Pnap_4269 158065 - 156791 - | hypothetical protein Pnap_4270 158334 - 158705 + | hypothetical protein TERM 187 160060 - 160070 + G 84 -4 -5.22289 | opp_overlap 160060 CAAGCCAGGAGAGAA TCTT TTC AAGA TTTTTGTGTTTGATG TERM 188 160768 - 160754 - g 95 -2.8 -5.71638 | CAAGAAGCAAAAAAA CTATTG GCT CAATCG CGTAAGGACAACCTC Pnap_4271 158708 - 161203 + | heat shock protein 70 Pnap_4272 161207 - 162655 + | ATPase central domain-containing protein Pnap_4273 162714 - 164369 + | hypothetical protein TERM 189 164720 - 164757 + T 71 -4.8 -4.65838 | gap 1, opp_overlap 164720 164732 GCCGATTTCAACTGA CCCATGCGAA-ACCAGC CAGAT GCCGCTCTTCGCCTGGG TTTTTCGGGTGTGTG TERM 190 166569 - 166596 + T 95 -8.4 -4.85782 | CTCTCGCTAATTTGG TGAGTGATGCCA AAAA TGGCAACACGCA TTTATTTTTGGCAAA Pnap_4275 168343 - 166679 - | UvrD/REP helicase TERM 191 168328 - 168360 + g 81 -2.6 -5.24129 | overlap 168317 168316 CGGACGGAAGCCAGG CTTGCGGTTTGATC ACTCA GGTAGGTCCGCAAG TTTTTTCTCGACCAA Pnap_4276 170277 - 168340 - | Fis family transcriptional regulator TERM 192 170570 - 170595 + r 70 -3.1 -4.79949 | overlap 170539 CCATCGAAGATGCAA CGGCGGCGGTA GAGA TTTCGGCGCTG TTATTTTTTTCGGCA Pnap_4277 172820 - 170793 - | DEAD/DEAH box helicase domain-containing protein TERM 193 171112 - 171139 + g 79 -13.5 -3.53012 | overlap 171127 CCGTCATTGCCAGTT TCGGGCAGGTC TTGAGT GACCTGCTCGA TTTCAAGCCGGGCGC TERM 194 171852 - 171841 - G 85 -5.8 -5.00884 | overlap 171843 ATGCGCTGCAAAAAA GACG ACAC CGTC GCTGGCGCATCGATC TERM 195 171965 - 171955 - G 73 -8.2 -4.07568 | TTTTCCTCGGCAAAA GCGG TTT CCGC CAGCTTTCGCTCCGA TERM 196 172437 - 172481 + g 93 -8 -5.0538 | overlap 172451 GCCTTCGAGCGACTC GGGCGTG-GTCAGGAGGATGTC GGG GGCATCCT-TTAACGCATGCCC TTTTTTCGACTGCGA Pnap_4278 174127 - 172817 - | methyl-accepting chemotaxis protein TERM 197 173657 - 173628 - G 78 -6.4 -4.58663 | gap 1, opp_overlap 173615 AGCACGGCGGAAAAA GCCGGCGCGGTTT TGCTG ATACC-CGCCAGC TGCGCTTCCATGAGC Pnap_4279 176850 - 174124 - | alkaline phosphatase domain-containing protein TERM 198 175421 - 175392 - G 73 -8.6 -4.08394 | ACAGCTCCTGGAAAA TGCTGGTGCTCA GGCCAT CGACCACCAGCA GCAGCACGGGATGCA TERM 199 176048 - 175998 - G 74 -9.5 -3.85698 | GGGCCGGGCGATAAA CCTCGGCGCCGCCGGGCTCACAA ACCAG TTGTTGGGCCGCCTGCGCCCAGG CGCGGCCTTCGAGCA Pnap_4280 180569 - 176847 - | putative phage resistance protein TERM 200 176943 - 176968 + g 82 -3.3 -5.14965 | gap 1, overlap 176946 GTCTTTCAAGAGCGA TGCGGCTTCG TCGGTAC CGAGGCC-CA TTTTTTCATCGCCAT TERM 201 178479 - 178440 - G 78 -6.3 -4.56597 | overlap 178444 CTTGTGGCTGAAAAA CGAAGGCAGCCACACCA GCGTCT TGGTGTCGCCGCCGCAG TAGTCCCCCAGGCGG TERM 202 178475 - 178444 - G 78 -12.3 -3.80855 | overlap 178440 TGGCTGAAAAACGAA GGCAGCCACACCA GCGTCT TGGTGTCGCCGCC GCAGTAGTCCCCCAG TERM 203 179660 - 179634 - G 76 -10 -3.86897 | opp_overlap 179633 CTGACGGGCCACAAA GCTGACCAGCGG AAT CGGCCGGTCGGC ATTGGTCGCCTCCAC TERM 204 180141 - 180121 - G 78 -6.8 -4.65895 | gap 1, overlap 180123 TCGGCCAGGTAAAAA CCCG-GCAC CGGC GCGCTCGGG TGCAGCTTGCGCACA Pnap_4281 181241 - 180693 - | hypothetical protein Pnap_4282 182312 - 181245 - | hypothetical protein TERM 205 181293 - 181283 - G 74 -4.6 -4.62783 | CATCGAGGTCAAAAA GCCG CAG CGAC TCCTCGACAATCGGG TERM 206 181383 - 181398 + g 75 -3.2 -4.82901 | CTTGCGCAGGTCCAG CAGCGA ATAG TCGGTG TTTTTCTGGCGGGCC TERM 207 181674 - 181688 + g 73 -2.8 -4.70659 | opp_overlap 181674 CTTGCCGCGGCGAAA GACG ATGCTGC CGTC TTTTTCCATCTCCAC TERM 208 181730 - 181743 + g 77 -3.8 -4.90906 | CAGTGACCTCCTCCA GGTG CTTGAA CACC TTTTTGATGTTGTCC TERM 209 182106 - 182083 - G 78 -3.1 -5.00616 | gap 1, overlap 182084 182085 TTGGGCGGCAAAAAA GTCCAGCGCA GCTTT TGCGCCAG-C AACTCGGTCAAATCC Pnap_4283 186045 - 182344 - | hypothetical protein TERM 210 182627 - 182615 - G 74 -4.7 -4.66163 | opp_overlap 182615 182618 ATGTCTAGGTAAAAA CCGGC CAG GGCGG TGGCTTGCTGCAGGT TERM 211 183409 - 183371 - G 72 -7.9 -4.15833 | gap 1, overlap 183372 AGCACGATTTCAAAA GCGCGCTCGCCCAGCGCG ACTT CGGGCGGCGCG-GCGTGC TCGACATCGGCGGCT TERM 212 184820 - 184808 - G 100 -7.7 -5.44119 | opp_overlap 184810, overlap 184810 GCCAGCTCAAAAAAA CGTTC GGT GAACG GCACGCCCAGCGAAT TERM 213 184988 - 185009 + g 73 -11.5 -3.53811 | overlap 184971 CTGGCGTAGGCGTGG GCCAGGCCG CTGT CGGCGTGGC TTTCGGCCACGTCGA TERM 214 185231 - 185210 - G 74 -10.1 -3.70076 | opp_overlap 185216 185224, overlap 185201 185200 GCAAACGGATTCAAA TCCACGCCG GCCA CGGCGTCGA GCGCCTTTTGCGCCA TERM 215 186082 - 186118 + r 100 -15.2 -4.37013 | opp_overlap 186084 TTACTATTGTTTTAA TAGCTGCTTGCGCACG TCTGT CATGCGCAGGCGGCTA TTTTGATGCTTAATT TERM 216 186116 - 186084 - R 72 -11.2 -3.0263 | opp_overlap 186082 ACTATTGTTTTAATA GCTGCTTGCGCACG TCTGT CATGCGCAGGCGGC TATTTTGATGCTTAA Pnap_4284 187297 - 186128 - | hypothetical protein TERM 217 186548 - 186531 - G 75 -4 -4.67641 | opp_overlap 186537, overlap 186532 AGCTCAAAATCAAAA CGCAGC GCGTCG GCGGCG GCTCCGAGCATTTCG TERM 218 187232 - 187207 - G 71 -11.1 -3.51934 | gap 1, overlap 187205 GCGCGGCCAGAAACA GCCCGGAGCTGG AAG CC-GATCCGGGC GCGGTCTGCAAAATC Pnap_4285 191771 - 187488 - | protein kinase TERM 219 189562 - 189543 - G 75 -2.8 -4.82901 | gap 1 GGCTTTGGAGAAAAA CGCGGTGAA GCC TTCG-CGCG TGACAGGGTCGAACA TERM 220 190661 - 190678 + g 77 -12.7 -3.61764 | CCGTGTCGGGATTGC CCGCCTC GCGC GAGGCGG TTTGCCAGTTCATCA TERM 221 191424 - 191453 + g 74 -9.3 -3.85165 | gap 1, opp_overlap 191394, overlap 191447 GGCCTTGACGATGGC CGCCTGGC-GGC GCAGCAG GCTGGCCAGGCG TTTGGATTTGCGGTC Pnap_4286 191989 - 191768 - | Cro/CI family transcriptional regulator Pnap_4287 192190 - 192414 + | hypothetical protein TERM 222 192477 - 192460 - f 75 -11.3 -3.44051 | overlap 192472 GCTGCACCACCATAA GCGACCT AATT AGGTCGC ATCATCCAACACCGG TERM 223 192646 - 192623 - f 74 -4.6 -4.68456 | gap 1, overlap 192627 AGCATGAAAAAACAA GGTAGAGCTAC TGC GTAGTTC-ACC TGAACTGAAAATTTG TERM 224 192706 - 192728 + F 84 -2.8 -5.42259 | gap 1 AATGCAACCTGATCC GCG-CTTTT GTGTGG AAAAGTCGC TTTTTTTGCACATCA Pnap_4288 193002 - 193505 + | hypothetical protein Pnap_4289 194374 - 193643 - | IstB ATP binding domain-containing protein Pnap_4290 195954 - 194416 - | integrase catalytic subunit TERM 225 195040 - 195052 + g 76 -5.5 -4.56597 | opp_overlap 195032, overlap 195032 AAAGGCACTGCGCCT GTTGC CGG GCAGC TTTTTGAAGGCGCGC TERM 226 196526 - 196552 + H 70 -9.5 -3.36492 | opp_overlap 196524 196526 196531 196535, overlap 196531 196533 196537 196540 196542 AGCATTTGAAAAGCA GAAAACTCACC CTTCA GGTGTGTTTTC TTGTGGCCTTGGCGC TERM 227 196547 - 196531 - H 71 -4.3 -4.67635 | opp_overlap 196531 196526 196533 196537 196540 196542, overlap 196526 196524 196535 TTGAAAAGCAGAAAA CTCACCC TTC AGGTGTG TTTTCTTGTGGCCTT TERM 228 196531 - 196547 + H 72 -3.6 -4.78839 | opp_overlap 196526 196524 196531 196535, overlap 196526 196533 196537 196540 196542 TTGAAAAGCAGAAAA CTCACC CTTCA GGTGTG TTTTCTTGTGGCCTT TERM 229 196537 - 196594 + H 86 -10.7 -4.15748 | gap 1, opp_overlap 196531 196526 196524 196535, overlap 196533 196531 196526 196540 196542 AGCAGAAAACTCACC CTTCAG-GTGTGTTTTCTTGTGGCCTTG GCG CAAGGCCACAAGAAAGCAATCGCTGTGC TGTTTTTTAACATCC TERM 230 196540 - 196591 + H 100 -19 -3.08977 | gap 1, opp_overlap 196531 196526 196524 196535, overlap 196533 196531 196526 196537 196542 AGAAAACTCACCCTT CAG-GTGTGTTTTCTTGTGGCCTTG GCG CAAGGCCACAAGAAAGCAATCGCTG TGCTGTTTTTTAACA TERM 231 196542 - 196589 + H 93 -15.8 -3.09112 | gap 1, opp_overlap 196531 196526 196524 196535, overlap 196533 196531 196526 196540 196537 AAAACTCACCCTTCA G-GTGTGTTTTCTTGTGGCCTTG GCG CAAGGCCACAAGAAAGCAATCGC TGTGCTGTTTTTTAA TERM 232 196638 - 196627 - H 71 -4.4 -4.53349 | CAATGAGGAAAGAAA GCAT CTGT ATGC CAGCAACAAACAAAG Pnap_4291 196635 - 197126 + | hypothetical protein TERM 233 197217 - 197231 + F 91 -7.8 -5.00642 | opp_overlap 197217 197218, overlap 197218 AATCATTGCCAAAAA TCCTGC ATA GCAGGG TTTTTGTATGAATTG TERM 234 197231 - 197217 - f 73 -5.6 -4.60889 | opp_overlap 197217 197218, overlap 197218 AATCATTGCCAAAAA TCCTGC ATA GCAGGG TTTTTGTATGAATTG TERM 235 197388 - 197346 - f 100 -15.6 -3.30159 | opp_overlap 197344 197343, overlap 197348 197349 GTAATCCCTTCACAA GAGGGCTTGCCGATATGCCC AAT GGACATAACGGCAAGCCTTG AGCTTGATCCCTTTT TERM 236 197386 - 197348 - f 100 -18.2 -3.21772 | opp_overlap 197344 197343, overlap 197346 197349 AATCCCTTCACAAGA GGGCTTGCCGATATGCCC AAT GGACATAACGGCAAGCCT TGAGCTTGATCCCTT TERM 237 197385 - 197349 - f 100 -21.7 -2.52742 | opp_overlap 197344 197343, overlap 197348 197346 ATCCCTTCACAAGAG GGCTTGCCGATATGCCC AAT GGACATAACGGCAAGCC TTGAGCTTGATCCCT TERM 238 197506 - 197533 + G 76 -7 -4.42386 | gap 1, opp_overlap 197484 197506, overlap 197508 TTGAGCCCAACAGAA CCCTCGCTGCACT TCT GGTGCAGC-AGCG TTTTCTGAATGAAAA TERM 239 197696 - 197710 + G 73 -3.5 -4.69549 | gap 1, overlap 197696 ATCCCTGAATCTGAT GG-GCC AGGA GGCTCC TTTTGATTTTCAATT Pnap_4292 197439 - 197918 + | hypothetical protein TERM 240 198066 - 198042 - f 76 -5 -4.79223 | gap 1, opp_overlap 198045 198046, overlap 198046 TCACAGTATTAAAAA GC-AACCCTCT CACG AGGGGGTTTGC CGTTATGCCTTCCGG TERM 241 198059 - 198046 - f 71 -8.1 -3.85504 | opp_overlap 198045 198046, overlap 198042 AGTATTAAAAAGCAA CCCTC TCAC GAGGG GGTTTGCCGTTATGC TERM 242 199346 - 199326 - g 71 -9.6 -3.72363 | opp_overlap 199326 CATCCAAAGTTCAAA CCGGTGCC GTCAA GGCGCCGG TGAGTTCGGAGCCCA Pnap_4293 198155 - 199906 + | parB-like partition proteins TERM 243 199926 - 199963 + F 91 -15 -3.05596 | gap 1, opp_overlap 199948 AATTTTTTGACTCCC TGA-CGTGTCCGGTGCC CACAA GGCACTGGACGCGCTCA TTCAATGCGCCGGTC TERM 244 200000 - 200029 + F 87 -8.6 -4.5815 | TGCCCTGCAAATTCC CATGTCTAGTGC CCAACA GCACCAGGCATG TTCTTTATTTTTCTT TERM 245 200479 - 200496 + F 74 -11.3 -3.25823 | opp_overlap 200478 200477 200475 AGGGCGAAGAAGAGC CAGGCAC TACC GTGCCTG TTGCTGTGCCAGCGC TERM 246 200512 - 200527 + F 95 -10.4 -4.67641 | overlap 200499 TTGCTGTGCCAGCGC CCGCTG TCAC CAGCGG TTTTGATTTTGAAAT Pnap_4294 200560 - 200769 + | hypothetical protein TERM 247 201002 - 201016 + G 78 -10 -4.08974 | opp_overlap 200993 200984, overlap 200985 CAATCAGGGGGGAAT GTGGGT TTT ACCCAC TTTCTCTCCTGAAAT TERM 248 201043 - 201079 + G 74 -10.2 -3.80573 | gap 1, opp_overlap 201043 AAATACCTCTTGAAA TCAGTCGGGCT-GACGC TGAA GCGTCAAACCTGGCTGA TTTCATACTGCTCGC TERM 249 201119 - 201104 - g 93 -7.6 -4.96848 | GCTCGCACACAAAAA GGGAAT TCGC ATTCCC GACTCGATATACACG TERM 250 201626 - 201615 - g 83 -7.2 -4.66347 | ACGAAAAAAGAGAAA GCGG CATG CCGC TCAATGAGTGCTTCA Pnap_4295 200886 - 202046 + | hypothetical protein TERM 251 202086 - 202103 + G 81 -9.9 -4.15703 | opp_overlap 202083 202086 202100 CGAACTCGACAACCA TGGCCTT GCAA AAGGCCA TTCTTGTTTATGGCG TERM 252 202693 - 202669 - g 71 -5 -4.43309 | gap 1, overlap 202672 202673 GAACTTCAAGGAAAA GGAC-CGCCTT GTGA AAGGCGTGTGC CCCATCGATTTCTGG Pnap_4296 202049 - 202846 + | hypothetical protein Pnap_4297 202846 - 203490 + | hypothetical protein TERM 253 203991 - 203980 - g 72 -2.2 -4.74103 | overlap 203984 CGCGCAAGCGAAAAA CTGA CGAC CCAG AGCGCCTGCCCCATG Pnap_4298 203487 - 204332 + | UBA/THIF-type NAD/FAD binding protein TERM 254 204463 - 204420 - f 100 -15.4 -4.08692 | gap 1, opp_overlap 204409 204417, overlap 204423 CAATCCTTCTGAAAA GGA-GGTTTGCCGTTAGGCCC CCT GGACCTAACGGCAAGCCGTGC AGCGATTTTTTTACA TERM 255 204459 - 204423 - f 100 -21.7 -3.08032 | opp_overlap 204409 204417, overlap 204420 TCCTTCTGAAAAGGA GGTTTGCCGTTAGGCCC CCT GGACCTAACGGCAAGCC GTGCAGCGATTTTTT TERM 256 204546 - 204534 - g 75 -3.3 -4.82855 | opp_overlap 204534 GAGCAAATTGAAAAA CCATC TTG GGTGG TTGGTTCGAGCGGTA Pnap_4299 204426 - 204968 + | hypothetical protein TERM 257 204987 - 204947 - T 100 -17.7 -3.35283 | opp_overlap 204948 204949, overlap 204948 AGAAGCATTTCACAA GTTCTTCCCCGACTACGCA TAA TGCGTAATCGGGGAAGATA TTGATGGAGCATCAC TERM 258 204948 - 204987 + T 100 -17.4 -3.14931 | gap 1, opp_overlap 204948 204947, overlap 204949 GAAGCATTTCACAAG T-TCTTCCCCGACTACGCA TAA TGCGTAATCGGGGAAGATA TTGATGGAGCATCAC TERM 259 204986 - 204948 - T 100 -21.2 -2.60688 | opp_overlap 204948 204949, overlap 204947 GAAGCATTTCACAAG TTCTTCCCCGACTACGCA TAA TGCGTAATCGGGGAAGAT ATTGATGGAGCATCA TERM 260 204949 - 204985 + T 100 -22.5 -3.1372 | opp_overlap 204948 204947, overlap 204948 AAGCATTTCACAAGT TCTTCCCCGACTACGCA TAA TGCGTAATCGGGGAAGA TATTGATGGAGCATC TERM 261 205048 - 205063 + T 100 -10.4 -5.1861 | opp_overlap 205048 205045, overlap 205051 205060 TTTTTTAAAATATCA GCCCTC TTGA GAGGGC TTTTTTGATGGTCCA TERM 262 205092 - 205115 + T 72 -3.9 -4.70879 | opp_overlap 205098, overlap 205060 205051 CAGAGATGAATGATC GAAAAAGTC CTTTAA GACTTATTC TTTTTCCCCTTTCGG TERM 263 205250 - 205272 + T 76 -12 -3.03956 | overlap 205258 AGCATGATTTTTTAA CCCCAGGG CGACAAA CCCTGGGG TCTGTCGTTCCTTCT Pnap_4300 205810 - 205475 - | hypothetical protein TERM 264 205624 - 205660 + g 78 -11.6 -3.75024 | opp_overlap 205622 205623 205620 205634, overlap 205625 205634 ACTCGGAAATATAGG CGGAGAGAAAGGTTGC ATAAA GCAGCCTTTCTCCCCC TTCTTCCTGGTGGGC TERM 265 205625 - 205659 + g 79 -15.1 -2.84693 | opp_overlap 205622 205623 205620 205634, overlap 205624 205634 CTCGGAAATATAGGC GGAGAGAAAGGTTGC ATAAA GCAGCCTTTCTCCCC CTTCTTCCTGGTGGG TERM 266 205945 - 205962 + H 77 -4 -5.00412 | opp_overlap 205945, overlap 205910 205911 CCACTGCAGTAGTAA GGCCGC TTGGTC GCGTCC TTTTTCCTTGTCTTT Pnap_4301 206036 - 210985 + | helicase, C-terminal TERM 267 211014 - 211063 + F 100 -23.2 -2.71364 | gap 1, opp_overlap 210994 211014 211015, overlap 211003 210994 ACAACACCCTCACAA G-GGGTGTTGTAGTCGCTGCTCT GCAAG AGAGCAGCGACTACAGCATCCAC TGATTCGAGAACTGG TERM 268 211062 - 211014 - f 100 -19 -3.33583 | opp_overlap 211003 210994 211014, overlap 210994 211015 ACAACACCCTCACAA GGGGTGTTGTAGTCGCTGCTCT GCAAG AGAGCAGCGACTACAGCATCCA CTGATTCGAGAACTG TERM 269 211061 - 211015 - f 100 -22.5 -2.59668 | opp_overlap 211003 210994 211014, overlap 210994 211014 CAACACCCTCACAAG GGGTGTTGTAGTCGCTGCTCT GCAAG AGAGCAGCGACTACAGCATCC ACTGATTCGAGAACT Pnap_4302 211149 - 211691 + | hypothetical protein TERM 270 211713 - 211694 - f 91 -15 -3.01712 | CTGGCGGGGCTAACA GGCGGCCT AATT AGGCCGCC TATAAAAAAGACGCG TERM 271 211928 - 211915 - f 100 -5.2 -5.63103 | CGTGAATCAAAAAAA GCGC ATTCGA GCGC CACGGGCAGAGCTTT TERM 272 212020 - 212061 + F 88 -9.6 -4.42851 | opp_overlap 212048, overlap 212048 212048 TCTCACACTTTTGAT CCAGTTGTTTTTCCTGTT TTGTTT AACAGGAAAACCCATTGG TTTTGCCTTTCTTAA TERM 273 212176 - 212162 - f 70 -10 -3.32268 | opp_overlap 212162 CAATTAGCGTGACAA GCGTTG TTG CAACGC TAATTCAGCTCAACT TERM 274 212261 - 212275 + G 78 -2.8 -5.07652 | opp_overlap 212253 AAAGAAATCCCAGAC GATGAG AAT CTTGTC TTTTGTTTTAACAGG Pnap_4303 212201 - 212485 + | hypothetical protein TERM 275 212498 - 212509 + F 100 -2.2 -6.36459 | overlap 212498 212503 212507 TAAAAAATTTGAATT TTCC TTCG GGAG TTTTTTTTTGTTAAG TERM 276 212819 - 212840 + F 70 -6.5 -4.07885 | opp_overlap 212819 212822, overlap 212822 212823 ATACCATTAAAAAAT GAATGCTCC TTCT GGGGCTTTC TTTTGCCACCAAGTA TERM 277 212876 - 212822 - f 100 -14.5 -3.96447 | gap 1, opp_overlap 212819 212822 212823, overlap 212819 212863 CCATTAAAAAATGAA TGCTCCTTCTGGGGCTTTCTTTTGCC ACCA AGTAAAAGAAAGCCCCATCAGG-GCA ACACCTTTTTTAACT TERM 278 212823 - 212836 + F 75 -5.9 -4.64861 | opp_overlap 212819 212822, overlap 212819 212822 CATTAAAAAATGAAT GCTCC TTCT GGGGC TTTCTTTTGCCACCA TERM 279 212875 - 212863 - f 81 -6.9 -4.78981 | opp_overlap 212822, overlap 212822 ACCAAGTAAAAGAAA GCCCC ATC AGGGC AACACCTTTTTTAAC Pnap_4304 212963 - 213877 + | hypothetical protein TERM 280 213961 - 213938 - f 76 -9.6 -3.90241 | opp_overlap 213938 TATCAACCACAAGAA GCCACATTCA ATTT TGAGTGTGGC TTTTTTTATTAACTT TERM 281 213938 - 213961 + F 100 -11.8 -5.83226 | opp_overlap 213938 TATCAACCACAAGAA GCCACATTCA ATTT TGAGTGTGGC TTTTTTTATTAACTT Pnap_4305 213989 - 215089 + | DNA polymerase III, beta subunit TERM 282 215113 - 215126 + F 76 -9.5 -3.83998 | opp_overlap 215105, overlap 215119 215121 GAATCAATCGTCAAG GCCCC TCAA GGGGC TTTGCTATGCCATCC TERM 283 215119 - 215163 + F 95 -10.7 -4.59109 | opp_overlap 215105, overlap 215113 215121 ATCGTCAAGGCCCCT CAAGGGGCTTTGCTATGCCAT CCC AAGGCATAGCAAAGCCTGAAG TTTTTAAGCGCTGTG TERM 284 215121 - 215161 + F 72 -11.9 -2.60508 | opp_overlap 215105, overlap 215113 215119 CGTCAAGGCCCCTCA AGGGGCTTTGCTATGCCAT CCC AAGGCATAGCAAAGCCTGA AGTTTTTAAGCGCTG Pnap_4306 215133 - 215753 + | hypothetical protein TERM 285 215774 - 215784 + F 95 -8.2 -4.86385 | opp_overlap 215773 215774, overlap 215773 TGCGTGACTGATAAC CCCC TCG GGGG TTTATTTTTCAAGCT TERM 286 215820 - 215877 + F 83 -14.9 -2.63252 | opp_overlap 215840 215841, overlap 215809 215820 215865 GAATCAAAACGCTGT TGTGTTGTCGCCGACCGAAATTTGACC ATCT GGTCAATATTCAATCGGCGCCAACACG CTGTTGTTCAGACGT TERM 287 216238 - 216227 - g 74 -2.2 -4.83615 | GATTCTGGAGAAAAA CCCA GCGT TGAG AAAAGCATTCACGCC TERM 288 216562 - 216534 - g 78 -11.7 -3.8186 | overlap 216535 GACCTCAAGGAACAA GCCCAACGCAAGA AAT TCCTGCGTCGGGA GCCCACAATCCGCAA TERM 289 216561 - 216535 - g 79 -15.2 -2.88634 | overlap 216534 ACCTCAAGGAACAAG CCCAACGCAAGA AAT TCCTGCGTCGGG AGCCCACAATCCGCA TERM 290 216912 - 216898 - g 85 -10 -4.26076 | opp_overlap 216887 216884 216898, overlap 216884 CGACGCTGATCAAAA GCAGCA TCT TGCTGC TTGAGGAAAAAGAGC TERM 291 216938 - 216924 - g 73 -2.8 -4.72272 | CTGCTTGAGGAAAAA GAGC GTTTACA GCTC GCGCCACCGGCAGCT Pnap_4307 216027 - 217454 + | hypothetical protein TERM 292 217458 - 217494 + F 71 -10.2 -3.29829 | overlap 217459 ATAGCTGCCTGACCT TATCAGTGGGCCTGTT CACAA GACAGGCTCACTGAGG TTCTACAAAACTATG TERM 293 217548 - 217536 - f 100 -10.5 -5.43866 | opp_overlap 217536 CAACTTCTAAAAAAA GCGCC CTG GGCGC TTTTTTTCTGCCCGC TERM 294 217536 - 217548 + F 100 -10.5 -5.60993 | opp_overlap 217536 CAACTTCTAAAAAAA GCGCC CTG GGCGC TTTTTTTCTGCCCGC Pnap_4308 217746 - 218144 + | hypothetical protein TERM 295 218222 - 218210 - g 72 -2.6 -4.72272 | GTCTTGTATCAAAAA CGGA TATGG CCCG AATGAAGGCGCTGTG Pnap_4309 218164 - 218451 + | putative transcriptional regulator TERM 296 218490 - 218518 + F 100 -15.3 -5.63504 | opp_overlap 218490 TATTTCGGATTAAAA GCCTCACATCCTG CAG CGGGATGCGAGGC TTTTTTTGTGACCTT TERM 297 218518 - 218490 - f 100 -15.3 -4.2558 | opp_overlap 218490 TATTTCGGATTAAAA GCCTCACATCCTG CAG CGGGATGCGAGGC TTTTTTTGTGACCTT Pnap_4310 218632 - 219051 + | hypothetical protein TERM 298 219401 - 219448 + T 100 -15.8 -3.7046 | opp_overlap 219394, overlap 219394 219404 CACTCAAACCCCTTT CGAGAGGTTTTCTGATGTGTCT CTAT GGACGCATTAGAAAGCCTCTGG TTTGGCCCTTTTTTA TERM 299 219404 - 219445 + T 87 -16.1 -2.93783 | opp_overlap 219394, overlap 219394 219401 TCAAACCCCTTTCGA GAGGTTTTCTGATGTGTCT CTAT GGACGCATTAGAAAGCCTC TGGTTTGGCCCTTTT TERM 300 219490 - 219516 + T 100 -15.2 -3.89614 | opp_overlap 219490 TGGGTAATTAAAAAA GCTGCCCCCATT TCG AATGCGGGCAGC TTTCTAAAGCTTGCA TERM 301 219516 - 219490 - T 100 -15.2 -5.26875 | opp_overlap 219490 TGGGTAATTAAAAAA GCTGCCCCCATT TCG AATGCGGGCAGC TTTCTAAAGCTTGCA Pnap_4311 220165 - 219542 - | hypothetical protein Pnap_4312 220465 - 220172 - | hypothetical protein TERM 302 220672 - 220623 - R 91 -7.1 -5.16572 | gap 1, opp_overlap 220641, overlap 220632 220636 ATCCAACTCAAAAAA GCCAGACCAG-CAAGCAAACAGAC TTT GACTGTCTGCTTGACAAGAGTGGC TGTACGCTTCATGGA Pnap_4313 221350 - 220721 - | hypothetical protein TERM 303 221475 - 221503 + H 71 -11 -2.91695 | gap 1, overlap 221461 221468 AGGTCGTCCCAGACT TG-GAGGCGGCCT AATT AGGCCGCCTCGCC TGGTTTGCAGCTGCC TERM 304 222026 - 222043 + G 72 -2.7 -4.72846 | gap 1 AACGATTTGACGGTG GC-TTCGT CGT GCGAACGC TTTTTGGGTATGTGC TERM 305 222395 - 222384 - g 75 -4.4 -4.75776 | overlap 222386 AATGGAATGGAAAAA TCGA AACC TCGA AAATTTCAGACCTGC Pnap_4314 221663 - 222580 + | hypothetical protein TERM 306 222628 - 222610 - f 100 -10.2 -4.8622 | opp_overlap 222610 GCGCTCAACGAAAAA GCGTAGCC CTC GGCTGCGC TTTTTTTATTTCGAT TERM 307 222610 - 222628 + F 100 -12.4 -5.96894 | opp_overlap 222610 GCGCTCAACGAAAAA GCGTAGCC CTC GGCTGCGC TTTTTTTATTTCGAT TERM 308 224382 - 224393 + G 74 -5.8 -4.53303 | opp_overlap 224382, overlap 224370 224368 AGCTCTGTGCAAGAA GAGC GCAG GCTC TTTTATGTGGCCATG Pnap_4315 222675 - 224534 + | UvrD/REP helicase Pnap_4316 225126 - 224590 - | hypothetical protein TERM 309 224670 - 224683 + g 72 -3.8 -4.66609 | CATTTTGGGCTTTAC CACG CATGGC CGTG TTTTTGAATCCGATA TERM 310 225618 - 225654 + H 78 -12.4 -3.18274 | gap 1, overlap 225630 AAGGATTCTGCGCAA GCGTTGCATGCCAAGCC AAAC GGCT-GTTATGCAACGC TTGGCTTGGCCTCCC TERM 311 226378 - 226360 - g 82 -6 -4.83169 | opp_overlap 226360 226361, overlap 226361 AGTGTTCGAGAAAAA GTCCAACT TTC AGTTGGAT CTTCTCTCCGGCTCC TERM 312 226559 - 226543 - g 76 -8.1 -4.23892 | opp_overlap 226534 226533 TTCAATCATTGAAAA TGGATTT TAT AAATCCA AGCCGCTAGCGATAT TERM 313 227107 - 227087 - g 83 -7.5 -4.62872 | overlap 227088 ATCAAGCCGGAAAAA CGCGATCTG CTT CAGGTCGCA ACCGACTGGCTAGCA Pnap_4317 226289 - 227317 + | hypothetical protein TERM 314 227343 - 227359 + F 90 -5 -5.18726 | overlap 227344 227350 227351 227352 227358 TTCGACCGATTTTAC CCCCCC AATTC GGGGGC TTTTTATTGTGAAAC TERM 315 227350 - 227398 + F 87 -8.3 -4.55485 | overlap 227344 227343 227351 227352 227358 227385 GATTTTACCCCCCCA ATTCGGGGGCTTTTTATTGTGAA ACC TGCGCAATAAAAAGCTTCTGAGC TTTCCTTTTTTTATC TERM 316 227351 - 227397 + F 78 -11.8 -3.30851 | overlap 227344 227343 227350 227352 227358 227385 ATTTTACCCCCCCAA TTCGGGGGCTTTTTATTGTGAA ACC TGCGCAATAAAAAGCTTCTGAG CTTTCCTTTTTTTAT TERM 317 227352 - 227396 + F 75 -13.1 -2.5607 | overlap 227344 227343 227351 227350 227358 227385 TTTTACCCCCCCAAT TCGGGGGCTTTTTATTGTGAA ACC TGCGCAATAAAAAGCTTCTGA GCTTTCCTTTTTTTA TERM 318 227358 - 227390 + F 75 -11.5 -3.40784 | overlap 227343 227352 227351 227350 227385 CCCCCCAATTCGGGG GCTTTTTATTGTGAA ACC TGCGCAATAAAAAGC TTCTGAGCTTTCCTT Pnap_4318 227441 - 228844 + | DNA repair exonuclease-like protein TERM 319 228886 - 228907 + T 100 -8.7 -5.42975 | opp_overlap 228886, overlap 228897 228901 GCGCAAACCCCAAAA CCCTTTGCT TCGC AGCAGGGGG TTTTTCTTTGTCTCG Pnap_4319 229517 - 229164 - | hypothetical protein TERM 320 229456 - 229405 - G 88 -8 -4.84359 | opp_overlap 229426 229430, overlap 229407 TCATCTTCAGAAAAA CTGCATGGGACAGACAGAAGCCTT TGAA AAAGCTTTTCTCTGTCCCCTGTGG ACCTCGATGGGGCTG TERM 321 229766 - 229741 - H 91 -11.9 -4.07687 | opp_overlap 229741 229765 ATCTTTCTGCGAAAA GACGAATGCCT GTTG AGGCATCCGCC TTCTCGTCGCGAGGA TERM 322 230263 - 230284 + G 78 -2.9 -5.00616 | opp_overlap 230265, overlap 230265 CCGCGCAGTAGAAGC CATTCTCGG GAAA CCGGAAGTG TTTTTTGCCACGCAG TERM 323 231067 - 231093 + G 75 -4.3 -4.67904 | GATAGCGGCCTTGAT CGGTGAGGTGC CATGT GCGGGTCACCG TTTTTCGGGTTCGTG TERM 324 231736 - 231759 + G 71 -6 -4.32177 | overlap 231732 231737 TGTGTGCGATGCAAT TTCCAATGAG ATTT CTCAGTGGAG TTTGTTGTCGCGTGC Pnap_4320 229820 - 232252 + | putative ATPase involved in DNA repair TERM 325 232266 - 232322 + F 100 -17.5 -3.06206 | gap 1, opp_overlap 232261 232260 232258, overlap 232266 232307 232307 AAGGAAATACGGACA GGCTGTGAAGCCTTTCCACTGCCGTT CCGAGT GACGGCAGTGGAAAGGGTGTAC-GCC CTTTGCCTTTTTTTT TERM 326 232266 - 232323 + F 100 -16.4 -4.1441 | opp_overlap 232261 232260 232258, overlap 232266 232307 232307 AAGGAAATACGGACA GGCTGTGAAGCCTTTCCACTGCCGTT CCGAGT GACGGCAGTGGAAAGGGTGTACGCCC TTTGCCTTTTTTTTG TERM 327 232307 - 232329 + F 100 -4.9 -5.95166 | gap 1, overlap 232266 232266 232307 CCGAGTGACGGCAGT GG-AAAGGGT GTAC GCCCTTTGCC TTTTTTTTGGTTCAA Pnap_4321 232375 - 232953 + | hypothetical protein TERM 328 233367 - 233325 - g 77 -4.1 -4.83269 | gap 1, overlap 233337 233365 ACATCAGAGGAAAAA CTGATTG-ATGAAGCTGCCC TGAA GGCCAGCCCCATGCAAACTG CTCAGGCAGTGTCAG Pnap_4322 233190 - 234113 + | hypothetical protein TERM 329 234125 - 234108 - f 76 -3.3 -5.00884 | ACTGTTCTTAAAAAA GCGTAGC CATA ACTGCGC ATTCAAACCATCCGG TERM 330 234137 - 234153 + F 100 -9.4 -4.88407 | opp_overlap 234136 GCGCATTCAAACCAT CCGGCT CTAGT AGCCGG TTTTTAATTCACTAG Pnap_4323 234180 - 234824 + | single-strand binding protein TERM 331 234895 - 234885 - f 78 -6.8 -4.66535 | AACGCTGAAAAGAAA CTGC TAT GCAG TGCAAACCTCTCGGG TERM 332 234957 - 234902 - f 71 -10 -3.61178 | gap 2, opp_overlap 234897 234948, overlap 234949 GCTATGCAGTGCAAA CCT-CTCGG-GGTTTGCTTATCCGCT TCGTCG AGCGGATAAGCAAAAAACCGAGCAAG GCACGGGTGGTTTTC TERM 333 234963 - 234949 - f 95 -7 -5.32944 | opp_overlap 234948, overlap 234902 CGGATAAGCAAAAAA CCGAGC AAG GCACGG GTGGTTTTCAAACAA TERM 334 235713 - 235695 - g 75 -3 -4.82901 | TGCCTCGCATAAAAA CACGCGTT GCA ATCGTGTG TGAAGGCATTGAAAC TERM 335 235769 - 235759 - g 72 -2.4 -4.72272 | opp_overlap 235759 GGCCGCCACTAAAAA TCGC CAT GCGG TTTTTTCCGCGCTCA TERM 336 235759 - 235769 + G 83 -4.6 -5.02074 | opp_overlap 235759 GGCCGCCACTAAAAA TCGC CAT GCGG TTTTTTCCGCGCTCA Pnap_4324 235004 - 236029 + | hypothetical protein TERM 337 236075 - 236041 - T 100 -5.5 -5.72207 | opp_overlap 236044 236068, overlap 236042 236044 TTGAAAGGAAAAAAA TCAGCCCGGTGCCTC GTTAA GAGGGGCCGGGCTTT TTTACGCCTGTACTT TERM 338 236074 - 236042 - T 76 -9 -4.01698 | opp_overlap 236044 236068, overlap 236041 236044 TGAAAGGAAAAAAAT CAGCCCGGTGCCTC GTTAA GAGGGGCCGGGCTT TTTTACGCCTGTACT TERM 339 236072 - 236044 - T 77 -11.6 -3.57012 | opp_overlap 236044 236068, overlap 236042 236041 AAAGGAAAAAAATCA GCCCGGTGCCTC GTTAA GAGGGGCCGGGC TTTTTTACGCCTGTA TERM 340 236044 - 236072 + T 100 -13.8 -5.04385 | opp_overlap 236042 236041 236044, overlap 236068 AAAGGAAAAAAATCA GCCCGGTGCCTC GTTAA GAGGGGCCGGGC TTTTTTACGCCTGTA TERM 341 236188 - 236157 - T 90 -13 -3.86346 | opp_overlap 236155, overlap 236161 TTAGGTGGCCATAAA TTTACAGGCGGCCT AATT AGGCCGCCTGTGGA GATCTGTGATCAAAA TERM 342 236184 - 236161 - T 95 -18.2 -2.70354 | opp_overlap 236155, overlap 236157 GTGGCCATAAATTTA CAGGCGGCCT AATT AGGCCGCCTG TGGAGATCTGTGATC Pnap_4325 236547 - 236173 - | hypothetical protein TERM 343 236708 - 236692 - R 100 -5.7 -6.09196 | overlap 236693 CTTAAAACAAAAAAA CCCGCCA TGA CGGCGGT TAAAAATCGGATAAA TERM 344 236707 - 236693 - R 84 -9.2 -4.23077 | overlap 236692 TTAAAACAAAAAAAC CCGCCA TGA CGGCGG TTAAAAATCGGATAA Pnap_4326 237274 - 236732 - | hypothetical protein TERM 345 237015 - 237032 + g 71 -5.5 -4.2828 | AGAGCAAGTTCCCGT GGCATCG CTGT CAATGCC TTTTGATACATCAAA Pnap_4327 237645 - 237271 - | hypothetical protein Pnap_4328 238712 - 237678 - | hypothetical protein Pnap_4329 238888 - 240114 + | hypothetical protein TERM 346 240164 - 240188 + G 76 -5.6 -4.63218 | overlap 240165 TATGCCGTTGCCGGT TGGGCAGCCG GTGCA CTGCTGCTCG TTTTGTTCAGACCAC Pnap_4330 240107 - 242020 + | hypothetical protein TERM 347 242052 - 242033 - f 76 -12.8 -2.81225 | overlap 242030 TAGACAAGTCAACCA CCCCGGCC TAAA GGCCGGAG CTTGAAGTCGAAAGA TERM 348 242720 - 242695 - g 77 -2.6 -5.06414 | overlap 242696 242697 242699 CCGGGGCAACAAAAA GTCAGGCT-GGC TGGC ACCAAGCCTG-C AACACCGGGTTGATA TERM 349 243665 - 243640 - g 71 -9.7 -3.74872 | gap 1, overlap 243643 AGGTACGTCACCAAA GCAGGGGGATGC TTT GCATCCCGC-GC TCTACCTCCCCGGCC TERM 350 243673 - 243692 + G 89 -16.4 -3.53091 | TCCCGCGCTCTACCT CCCCGGCC TGAA GGCCGGGG TTTCACGCGCAAACT Pnap_4331 242315 - 243709 + | HNH endonuclease TERM 351 244170 - 244183 + G 81 -3.8 -5.01732 | overlap 244180 TTATAACTTTCAGTT CCAC AACCCC GTGG TTTTTTGGACCGCTT Pnap_4332 243709 - 244344 + | hypothetical protein TERM 352 244364 - 244383 + F 100 -15 -5.85178 | TCGATGCTCGCAGGA GGCGGCCT AATT AGGCCGCC TTTTTTTTAACTATT Pnap_4333 244510 - 245103 + | putative fimbrial protein TERM 353 245122 - 245151 + F 100 -20.9 -5.72622 | opp_overlap 245129 GCTTTGCTTCGCATA GGGGAAATCGCTG ATTG CAGCGATTTCCCC TTTTTTGTTTCTACC TERM 354 245144 - 245129 - f 70 -9 -3.63627 | opp_overlap 245122 TTCGCATAGGGGAAA TCGCTG ATTG CAGCGA TTTCCCCTTTTTTGT TERM 355 245612 - 245580 - g 81 -9.8 -4.18018 | gap 1, opp_overlap 245553 GCCCTGCAGCGAAAA GCGCGCCCG-GCTGC TTCT GCAGAGCAAGCGCGC CAGGGTTCACCGGGT TERM 356 245893 - 245903 + G 93 -8.2 -5.00616 | opp_overlap 245883 AACCAGCTGCGCTAC CGCG CCC CGCG TTTTTTGAACCGGGG Pnap_4334 245524 - 246882 + | HNH endonuclease TERM 357 246926 - 246945 + F 81 -12.1 -3.5393 | TCCGGCGCTCTACCT CCCCGGG CTGAAC CCCGGGG TTTCACGCGCATCAT Pnap_4335 247082 - 248665 + | hypothetical protein TERM 358 248685 - 248706 + T 86 -10.1 -4.33258 | opp_overlap 248682 248680 248685 TGCGCCAACACATCA TGGCGGCCT AATT AGGACGCCA TTTATGTTTGAGAAT TERM 359 248794 - 248813 + T 71 -10.7 -3.27525 | opp_overlap 248794 GTTGATGCAAAAAAA GACCCGC ACCAGG GCGGGTC TTCAGTTTGAGGGGA TERM 360 248813 - 248794 - T 100 -10.7 -5.47218 | opp_overlap 248794 GTTGATGCAAAAAAA GACCCGC ACCAGG GCGGGTC TTCAGTTTGAGGGGA Pnap_4336 249895 - 248837 - | Allergen V5/Tpx-1 family protein TERM 361 250025 - 249980 - H 84 -5.8 -4.98758 | gap 3, opp_overlap 249986, overlap 249986 AAAAATCCAGAAAAA GACATAGCCA-GGAAACT-TTAG CGG CCAAGAGTTTCCCTGGCT-TATC TCCAACATGAAAGCT Pnap_4337 250087 - 250824 + | hypothetical protein TERM 362 250925 - 250899 - T 70 -5.1 -4.39696 | opp_overlap 250904, overlap 250904 CTGCAAAGCAAGAAA CCAAAGCCACC TTTTC GGTGGCTTTTT TCGTTGTCGGCGGGG TERM 363 250920 - 250904 - T 84 -9.4 -4.23652 | opp_overlap 250904, overlap 250899 AAGCAAGAAACCAAA GCCACC TTTTC GGTGGC TTTTTTCGTTGTCGG TERM 364 250904 - 250920 + T 100 -9.4 -5.32944 | opp_overlap 250904 250899 AAGCAAGAAACCAAA GCCACC TTTTC GGTGGC TTTTTTCGTTGTCGG Pnap_4338 252381 - 250999 - | HipA domain-containing protein TERM 365 252283 - 252244 - G 100 -13.4 -4.63218 | opp_overlap 252244 CGTTCCGTAAGAAAA CCGTGAAGCCAGCTCGCG GCTG CGCGCGCCGGCTCCGAGG TCTTCGGTCAACGTC Pnap_4339 252665 - 252381 - | XRE family transcriptional regulator TERM 366 252901 - 252919 + H 100 -8.1 -5.32944 | opp_overlap 252901 TCGCAAGAAATCCAA GCCACCT TTGAC GGGTGGC TTTTTTCGTTGTGGG Pnap_4340 253051 - 254166 + | hypothetical protein Pnap_4341 255059 - 254244 - | hypothetical protein TERM 367 254931 - 254958 + g 73 -11.2 -3.6215 | GATGGTTTGGAGTTC GCGCTTGAGCCG CTCC TGGCTCTGGCGC TTTGCAATGGCTTGC Pnap_4342 255548 - 255063 - | hypothetical protein TERM 368 255632 - 255616 - R 76 -9.3 -3.9279 | AGGCAAGCGGATAAA GCGTCGC CTT GCGGCGC AGGGGAAGGGAAGGG TERM 369 255650 - 255660 + r 76 -3.2 -5.04385 | GGGAAGGGAAGGGAA TGGC GTG GCTA TTTTTTGAGCATGTC Pnap_4343 256005 - 255658 - | hypothetical protein Pnap_4344 256258 - 256010 - | hypothetical protein TERM 370 256339 - 256357 + r 74 -7.3 -4.07568 | opp_overlap 256339, overlap 256351 GGCGCAATGGCAAAA CCTGCGC TGCCC GCGCTGG TTTTCAGCAAGCGAC TERM 371 256357 - 256339 - R 74 -7.3 -4.19238 | opp_overlap 256339 256351 GGCGCAATGGCAAAA CCTGCGC TGCCC GCGCTGG TTTTCAGCAAGCGAC TERM 372 256385 - 256368 - R 72 -11.3 -3.14132 | opp_overlap 256351 256368, overlap 256380 GCTGGTTTTCAGCAA GCGACCT AATT AGGTCGC TTCATGGCGCCCGTG TERM 373 256368 - 256385 + r 72 -11.3 -3.14344 | opp_overlap 256368 256380, overlap 256351 GCTGGTTTTCAGCAA GCGACCT AATT AGGTCGC TTCATGGCGCCCGTG Pnap_4345 257448 - 256402 - | hypothetical protein Pnap_4346 258163 - 257516 - | hypothetical protein TERM 374 258081 - 258112 + g 72 -11.7 -3.28712 | opp_overlap 258108 258109, overlap 258066 258066 GCGGCCGTTTTGCCG GCCGGCTTTGGC-GC TGGC GCTGCCAAA-CCGGC TTCTGCAGCCGCGCC TERM 375 258507 - 258529 + G 100 -10.5 -5.49729 | opp_overlap 258506 258505 ACCGGAATTCAAAGT GCCTGGCCC CGCGC GGTCCAGGC TTTTTTTGAATCCTT Pnap_4347 258301 - 258582 + | hypothetical protein Pnap_4348 258965 - 259210 + | hypothetical protein TERM 376 259454 - 259466 + F 76 -3.4 -5.05113 | GGACACGCGCCGAAC TGGT CAAAA ACCA TTTTCTTTATGTCAA TERM 377 260468 - 260452 - g 75 -4.3 -4.7373 | overlap 260453 CCACTGCATGAAAAA GCTGGGC GTC ACCCAGG TCGACAGCGGCATCT Pnap_4349 259676 - 260965 + | phage integrase family protein TERM 378 261060 - 261044 - f 71 -10.1 -3.55761 | overlap 261056 CAGCCAGCCGTGAAA GCCGCCT TGA AAGCGGC CGCATTCAGCCGCAT TERM 379 261073 - 261056 - f 74 -10.5 -3.5394 | overlap 261044 AAAGCCGCCTTGAAA GCGGCCG CATT CAGCCGC ATTCGCGCCTGGCCT TERM 380 261176 - 261147 - g 78 -4.9 -4.74103 | gap 1 TGCCCAACGGAAAAA CGCAACCCG-ATCC AGT GGCTACGGGCCACG GCAGTGCGCAGGCCC TERM 381 261535 - 261488 - g 71 -8.4 -3.91897 | opp_overlap 261472, overlap 261503 261530 GGCTTTATTGAGAAA GTCGATTTTGAGATATTCCCCC AAAC GGGGGAAAACTCCAAAGTCGGC AGACCAACACAAGAT Pnap_4350 261131 - 262006 + | AntA/AntB antirepressor domain-containing protein TERM 382 262061 - 262034 - T 81 -12.6 -3.10522 | opp_overlap 262036 ACCTGAGCGAACAGA CCGCCCCCACCG GCTC CGGTGGGGGCTT TTTCGTTTCGCCCGG TERM 383 262036 - 262059 + T 100 -19.6 -4.98531 | opp_overlap 262034 CTGAGCGAACAGACC GCCCCCACCG GCTC CGGTGGGGGC TTTTTCGTTTCGCCC Pnap_4351 262665 - 262111 - | hypothetical protein TERM 384 262170 - 262149 - G 72 -8 -4.12942 | gap 1, opp_overlap 262140, overlap 262140 262151 GCAAATGCGGGAAAA CA-GGCCCG CTTGT CGGGCCGTG AACGCCGAAGTGGTG TERM 385 262167 - 262151 - G 73 -10.8 -3.65832 | opp_overlap 262140, overlap 262140 262149 AAATGCGGGAAAACA GGCCCG CTTGT CGGGCC GTGAACGCCGAAGTG TERM 386 262636 - 262683 + g 86 -18.4 -2.62184 | gap 1, opp_overlap 262626 TGAAAGCTCGGGCCC CGATCCGG-GCTGGCGGCGCGTC AGC GGCAAGGCGCCAGCACCGGATCG TCGTGTGCCACGCCG Pnap_4352 263072 - 262656 - | hypothetical protein TERM 387 262848 - 262827 - G 76 -11.5 -3.71848 | opp_overlap 262827 GCCGCGCAGCAAGAA GCCGGCGCA GGTG TGGGCCGGC TTGATACCGGACTCG Pnap_4354 264428 - 263442 - | response regulator receiver protein TERM 388 265406 - 265393 - H 74 -9.5 -3.63627 | opp_overlap 265389 265372 TGCTCACAGGCGAAA CGCGC CTGC GCGCG CTGCTGGATTTTGGT TERM 389 265803 - 265782 - H 80 -10.1 -3.93864 | opp_overlap 265777, overlap 265772 265776 AGCAAGAAAGCGAAA CGCCACCGA GTCA TGGGTGGCG CGCTCGATTCTGCGA TERM 390 265839 - 265829 - H 95 -8.2 -5.0538 | TGCGACTGGAAAAAA CGCC GGT GGCG TAGCCGTAGACCAAA TERM 391 266247 - 266257 + H 85 -6.8 -4.88217 | TGGTTTTGACACTTG GCCA TAG TGGC TTTTACTTTTTTAGT Pnap_4356 266362 - 266949 + | response regulator receiver protein Pnap_4357 267914 - 267222 - | hypothetical protein Pnap_4358 268783 - 267920 - | hypothetical protein TERM 392 268716 - 268756 + g 81 -15.6 -3.002 | gap 1 TCACCGTTGTCTGCC TGGTGTGTG-AGCATGGCG CATG CGCCATGCTGCACATCCCA TATCTGTAAGATCAT Pnap_4359 271103 - 268848 - | UBA/THIF-type NAD/FAD binding protein Pnap_4360 272257 - 271103 - | hypothetical protein Pnap_4361 272895 - 272353 - | hypothetical protein TERM 393 272881 - 272916 + g 73 -3.4 -4.72272 | overlap 272884 GCCCCACCTTAAACG GCATTGATATGTCA AATTGGGG TGGCGTATCAATCC TTTTTCATCGACAGG TERM 394 273925 - 273907 - g 77 -2.3 -5.06414 | gap 1, opp_overlap 273907, overlap 273908 GCTGGCTAACAAAAA TGCCC-GG ATCG CCTGGGCG TTGCTAACACATGAC Pnap_4362 272942 - 273985 + | transposase IS116/IS110/IS902 family protein Pnap_4363 274563 - 274270 - | transposase IS3/IS911 family protein TERM 395 275096 - 275044 - g 72 -12 -3.28924 | gap 1 GAGCGCGGCCTACAA CGCGGCAGGGCAT-CAGCTGGCC GGCAAGTT GGCCAGCTGCATGACCGAGCGCG ACGCCTTGCGCGCCG TERM 396 275227 - 275203 - g 74 -14.2 -2.52896 | overlap 275179 275178 CCATGCCTCAAGCGA GGCGGCGCTG GCCGA CTGCGCCGCC GCGCGCAAGGAGCTC Pnap_4364 274796 - 275470 + | hypothetical protein TERM 397 275528 - 275516 - g 79 -9.1 -4.11484 | GCGAAGGCTCCAAAA CGGTC TAT GACCG TGACGCCATCGAGGC Pnap_4365 275467 - 275709 + | hypothetical protein Pnap_4366 276046 - 275723 - | hypothetical protein TERM 398 276774 - 276728 - R 74 -4.3 -4.72986 | gap 2, overlap 276729 GACGCTGACGAAAAA TGCGCTGCACGC-CTTG-CACGC CTT GCACGGCAGGAGCGAGCAGCACC TTCGCATTACGCTCG Pnap_4369 277776 - 277324 - | DNA-directed DNA polymerase Pnap_4370 278713 - 277790 - | hypothetical protein Pnap_4371 279378 - 278710 - | hypothetical protein TERM 399 278896 - 278886 - G 82 -3.2 -5.1675 | TCAGGTACGAAAAAA GCTC ATC AAGC AGAGGCAGTCGAAGC TERM 400 279573 - 279557 - R 73 -5.1 -4.652 | opp_overlap 279557 AAATTAGTGTAAAAA TTCACCT ACA AGGGGAA TTGTATAATATTTTC TERM 401 279679 - 279656 - R 79 -7.4 -4.45664 | gap 1, opp_overlap 279656 TCAAGGCAATGAAAA GTCGCCCCCAG AAG CTGCG-GCGAC TGTTACAAATTTTGG TERM 402 279746 - 279733 - R 75 -3.7 -4.98255 | overlap 279734 TGGGAATGAGAAAAA TGCGC TCCA GCGCC GCACCGGCTGGCCGC Pnap_4372 280444 - 279764 - | hypothetical protein Pnap_4373 280602 - 280955 + | DNA/RNA non-specific endonuclease Pnap_4374 280963 - 281829 + | deoxyribonuclease I Pnap_4375 282941 - 281934 - | hypothetical protein TERM 403 282041 - 282065 + g 91 -6.3 -5.27335 | TCCCTTCTAACTGTC CCGGCCTTACC ATT GGGAAGTCTGG TTTTTGTTTACCCCA Pnap_4376 283458 - 282997 - | hypothetical protein Pnap_4377 284193 - 283498 - | hypothetical protein TERM 404 283970 - 283982 + g 76 -9.1 -4.07568 | GTCCCTTGCGCGTTG CGCAG ACT CTGCG TTTTCAGGCCCCCAG Pnap_4378 287387 - 284190 - | phage integrase family protein TERM 405 284308 - 284329 + g 86 -8.7 -4.56597 | overlap 284310 CGCAGCGTGGTGCGG CCGTCCATG AGAT CATGGACTG TTTTTGGCCCCAGCC TERM 406 284310 - 284327 + g 76 -9.9 -3.90048 | overlap 284308 CAGCGTGGTGCGGCC GTCCATG AGAT CATGGAC TGTTTTTGGCCCCAG TERM 407 285367 - 285382 + g 73 -6.8 -4.32402 | gap 1, opp_overlap 285365 TGAAGGTCGAACAGT GC-CGCC GAT GGCGCGC TTCTTTTCGTTGAGC Pnap_4379 288706 - 287384 - | phage integrase family protein TERM 408 288821 - 288877 + H 100 -36.2 -2.77013 | gap 1, opp_overlap 288815 288833 288836, overlap 288822 288836 TGATAATATCGAGCG TCTGCCAGCGAACAACCCCGGCACCGG CTCG CCGGTGCCGGGGTTGTTCGCTG-CGGG GTTGTTCACGGGCTA TERM 409 288822 - 288878 + H 100 -34 -3.62046 | gap 1, opp_overlap 288815 288833 288836, overlap 288821 288836 GATAATATCGAGCGT CTGC-CAGCGAACAACCCCGGCACCGG CTCG CCGGTGCCGGGGTTGTTCGCTGCGGGG TTGTTCACGGGCTAG TERM 410 288866 - 288833 - H 100 -28.3 -3.05384 | opp_overlap 288821 288822 288836, overlap 288815 288836 GCGTCTGCCAGCGAA CAACCCCGGCACCGG CTCG CCGGTGCCGGGGTTG TTCGCTGCGGGGTTG TERM 411 288863 - 288836 - H 100 -24.2 -3.67597 | opp_overlap 288821 288822 288836, overlap 288815 288833 TCTGCCAGCGAACAA CCCCGGCACCGG CTCG CCGGTGCCGGGG TTGTTCGCTGCGGGG TERM 412 288836 - 288863 + H 100 -24.2 -3.67597 | opp_overlap 288815 288836 288833, overlap 288821 288822 TCTGCCAGCGAACAA CCCCGGCACCGG CTCG CCGGTGCCGGGG TTGTTCGCTGCGGGG Pnap_4380 288997 - 289566 + | DNA/RNA non-specific endonuclease Pnap_4381 289579 - 289833 + | hypothetical protein Pnap_4382 290219 - 291574 + | hypothetical protein Pnap_4383 291753 - 292514 + | hypothetical protein TERM 413 293146 - 293186 + G 70 -7.5 -4.07568 | opp_overlap 293142 293153, overlap 293142 293147 293149 CCTATCAGCAATGTC CCAGACATTGCTCGCCTTG GAG CGAGGGGAGCACTCTCTGA TTTTACAAGCCCAGG TERM 414 294082 - 294094 + G 73 -6.3 -4.33417 | CGGGGATGAGCATCC TTTCG TTT CGAAA TTTGTTGTCGGTAAA Pnap_4384 292514 - 296014 + | DEAD/DEAH box helicase domain-containing protein Pnap_4385 298446 - 296587 - | hypothetical protein TERM 415 296875 - 296904 + g 76 -5.7 -4.59773 | CCTGAGCAGCGCGAT GTCGTGGCC TTTCTCGATGGC GGCCACGGC TTTTTGGCGGTCCAG TERM 416 297157 - 297143 - G 77 -2.7 -5.03145 | TAACGGCTCAAAAAA CGCAG TTCGT CGGCG CCCCACATATCCCGA Pnap_4386 299263 - 298751 - | hypothetical protein TERM 417 298925 - 298899 - G 75 -4.5 -4.81249 | gap 2, overlap 298900 298901 CTGCAAATCGAAAAA CGTGCAAGCGAGC TTG GCT-GCTTGC-CA AATGAAGCCAGAAAA TERM 418 299161 - 299171 + g 71 -5.4 -4.41633 | AGTGGGAAAGGGTGT TGAC CAG GTCA TTGTTTTTGCCGGTG TERM 419 300788 - 300811 + G 71 -9.6 -3.70902 | gap 1 TACTACGCCTACATG CAGGAGCGGCG GCA TGC-GCTCCTG TTTGACTATGGCGAA Pnap_4387 299906 - 301585 + | hypothetical protein TERM 420 301961 - 301982 + G 75 -13.7 -3.02144 | opp_overlap 301974 ATGACTTGGAGCGCC GCTTGGGGC AGAA GCCCCAGGC TGTTGCAACGCCTGC TERM 421 302871 - 302853 - g 95 -11 -4.46404 | GAACGAACAGGAAAA GAGCTCGG TTG CCGAACTC AAGAGCGCCATAAAC Pnap_4388 301600 - 304725 + | SMC domain-containing protein TERM 422 304847 - 304884 + T 71 -10.5 -3.23274 | overlap 304847 TCGCATGGCGCATGC TGGCTGGCTGGCTGGCT GGCT GGCTGGCTGGCTGGCCA TTCCATTGTGGGCCG Pnap_4389 306959 - 305289 - | hypothetical protein TERM 423 307331 - 307281 - g 72 -13.4 -2.72344 | gap 4 GCGCATCCGCAACGA GCTGTGCGCTGAGCGGCGC-AGCCGC GAC GCGGCCAGC-CCGCTCA-CGC-CGGC CGCTGGCTAACGCAG Pnap_4390 306991 - 307341 + | hypothetical protein TERM 424 309592 - 309561 - g 81 -8 -4.41047 | gap 1, overlap 309562 AGCCCTCAAGGAAAA CCTCC-GGGAGACCA TCG TGGTCCGCCTGGAGA TGCTCATCCCGCACA Pnap_4391 307699 - 309651 + | hypothetical protein Pnap_4392 309664 - 310890 + | hypothetical protein Pnap_4393 310877 - 311263 + | hypothetical protein Pnap_4394 311264 - 313021 + | superfamily I DNA/RNA helicase Pnap_4395 313828 - 313388 - | hypothetical protein TERM 425 314928 - 314916 - g 76 -5.5 -4.56597 | opp_overlap 314917, overlap 314917 GCGCGCCTTCAAAAA GCTGC CCG GCAAC AGGCGCAGTGCCTTT Pnap_4396 314014 - 315552 + | integrase catalytic subunit Pnap_4397 315594 - 316325 + | IstB ATP binding domain-containing protein Pnap_4398 317220 - 316591 - | hypothetical protein Pnap_4399 318579 - 317593 - | hypothetical protein TERM 426 318867 - 318900 + r 95 -14.7 -3.59262 | opp_overlap 318845 318857 GCGAAGCCTGCGTGC CGCTAATAGCGTTCC GCAT GGAGAGCTATTAGCG TTTCACAGTCTGCGC TERM 427 318936 - 318969 + r 95 -14.7 -3.6215 | GTGCCCTATATGCGC CGCTATTAGCGTTTC ACAT GGACCGCTAATAGCG TTTCGCATGGGTTGA Pnap_4400 319195 - 318941 - | hypothetical protein TERM 428 319968 - 319987 + r 76 -10.6 -3.7282 | TGGTGGCATCTGATA CCCCACCC CTTG GGGCGGGG TTCTTCATGCGGTAC Pnap_4401 321268 - 320087 - | hypothetical protein TERM 429 320574 - 320596 + g 76 -9.9 -3.90328 | gap 1, opp_overlap 320565 320577, overlap 320540 AAAACACGTTTGAGA GCAGCC-AGC GATG GCTTGGCTGC TTTCTGCGAGTTGTC TERM 430 320690 - 320675 - G 73 -3.2 -4.72272 | GGGCGCCATGAAAAA CGCC TGATCCTT GGCG CTGACCAGTACGGCC Pnap_4402 322165 - 321428 - | hypothetical protein Pnap_4403 322558 - 322286 - | hypothetical protein TERM 431 322483 - 322493 + g 79 -8.2 -4.25104 | overlap 322479 TCTCGATGGTCCGGG GCGC TCC GCGC TTTTGGTGCAGCGCA Pnap_4404 323155 - 322574 - | hypothetical protein TERM 432 323250 - 323231 - R 81 -12.1 -3.54307 | AAGATGCGCGTGAAA CCCCGGG GTTCAG CCCGGGG AGGTAGAGCGCCGGA Pnap_4405 324647 - 323214 - | HNH endonuclease TERM 433 323801 - 323822 + g 82 -2.8 -5.15969 | overlap 323783 AGCGGGTCGCGTTGA CCGCAGCG GCATCG CGCAGGGG TTTTTTGGCTTGCGC TERM 434 324217 - 324239 + g 100 -9 -4.99435 | overlap 324218 GTGTCGACGCGGTGC TGCAGGCTCG GGG CGAGCCAGCC TTTTTGCTTGTTGCC TERM 435 324218 - 324238 + g 77 -12.5 -3.58577 | overlap 324217 TGTCGACGCGGTGCT GCAGGCTCG GGG CGAGCCAGC CTTTTTGCTTGTTGC TERM 436 324559 - 324591 + g 81 -9.8 -4.18018 | gap 1, opp_overlap 324578 ACCCGGTGAACCCTG GCGCGCTTGCTCTGC AGAA GCAGC-CGGGCGCGC TTTTCGCTGCAGGGC Pnap_4406 325935 - 325225 - | hypothetical protein TERM 437 325610 - 325595 - G 71 -8.2 -3.89524 | ATTCCAGTCCAGAAA CGCCAG CCGG CCGGCG CCGGGCAATGGCGGT Pnap_4407 326225 - 325953 - | hypothetical protein TERM 438 326924 - 326911 - g 75 -3.7 -4.77157 | CGAAGTGACGAAAAA CGAGC TGAT GCGCG AGATGATCGAGACGT Pnap_4408 326471 - 327529 + | transposase, IS4 family protein TERM 439 327820 - 327793 - T 74 -8.4 -3.9712 | gap 1 TCACCGGACCATAAA CGGCCTCGACGGC AAA GCCGT-GAATCCG TGCCGGCAAATTCGC Pnap_4409 328357 - 327773 - | hypothetical protein TERM 440 327872 - 327862 - G 79 -8.2 -4.26903 | opp_overlap 327870 CCGATTTCACGAAAA GGCG ATC CGCC CCGATCATCACGCGG TERM 441 328428 - 328442 + r 72 -11.4 -3.10641 | opp_overlap 328426 328422 328423 GGCCATAAAGGCAGC GCGTGC TTC GCACGC TTGGCTGATCGCTTG Pnap_4410 328874 - 328587 - | hypothetical protein TERM 442 329127 - 329154 + r 72 -12 -2.78463 | CTGCAGGTGTCATTG CCGGCATGTACC CCTT GGTCTATGCCGG TGTGCTGGCGAGCCT Pnap_4411 329403 - 329146 - | hypothetical protein Pnap_4412 329725 - 329417 - | hypothetical protein TERM 443 329655 - 329666 + gr 80 -5.8 -4.68655 | opp_overlap 329654 329655 ATGGAATCGGGAAAT TGCG CCCT CGCA TTTGTTTTGGCGTTG Pnap_4413 330395 - 329694 - | hypothetical protein Pnap_4414 330653 - 330411 - | hypothetical protein Pnap_4415 331571 - 331284 - | hypothetical protein Pnap_4416 331624 - 331845 + | hypothetical protein Pnap_4417 332182 - 331889 - | hypothetical protein TERM 444 332400 - 332412 + r 74 -3.3 -4.91712 | overlap 332394 TTTTTTCTTCTATGT GCAGC ATG GCTTC TTTTTATGCGTTGAC Pnap_4418 332736 - 332416 - | hypothetical protein Pnap_4419 333041 - 332760 - | hypothetical protein TERM 445 333012 - 333044 + g 100 -7 -5.68438 | gap 1 TTTATAGCGCGTGCT TTGTTGGCGGCGTCC GCAT GCAC-CCGCCATCAA TTTTTTCTTTCCTGC TERM 446 333059 - 333084 + r 74 -7.5 -4.15044 | gap 1 ATTTTTTCTTTCCTG CCGCTGCCGGGC AAA GCCTGGGA-CGG TTTCTTCGGCAAAAG Pnap_4420 333364 - 333041 - | hypothetical protein Pnap_4421 333671 - 333381 - | hypothetical protein TERM 447 333706 - 333723 + r 81 -4 -5.24129 | overlap 333708 AGGTAGGGTGGCAGG GTCGGG CAGTTC CCCGCC TTTTTTCTCACGCAC Pnap_4422 334214 - 333813 - | hypothetical protein Pnap_4423 335527 - 334304 - | filamentation induced by cAMP protein Fic TERM 448 335207 - 335257 + g 75 -11.9 -3.54424 | overlap 335207 TTCGAGCTCCTGCTC G-GCCTGCATGTGGGCCAGGGCCAG GCG CTGGCGCTGGGCCACAT-CGGGAAC TTTGGAGAAGTCCGC TERM 449 335655 - 335688 + H 71 -9.5 -3.57792 | gap 1, opp_overlap 335655 TGGCCGAAATTTAAA GTGCAG-CCAGCGCCT GTC ATGCGCAGGGCTGCGC TTTGGGCATCACTCG TERM 450 335796 - 335810 + H 70 -7 -4.17048 | overlap 335797 TTGCCTCGCGCATCC CCGGCG ATG CGCCGA TTCTTTTCCCCCAGC TERM 451 336514 - 336471 - H 75 -5.8 -4.62336 | gap 1, overlap 336483 ATCGCACGGGAAAAA CCTCGACGACAAGGGCC-GGC ACT GCCTGGCCCGCATCCAGGAGG GCGCCCGGTAGATGG TERM 452 336502 - 336483 - H 75 -11.4 -3.41795 | gap 1, overlap 336471 AAACCTCGACGACAA GGGCC-GGC ACT GCCTGGCCC GCATCCAGGAGGGCG TERM 453 336777 - 336767 - H 70 -6.8 -4.13282 | overlap 336758 336771 AGTACAGTGCCAAAA GGCA GCT TGCC CTCATCGAGGTGGGC TERM 454 337220 - 337207 - g 76 -5.9 -4.56597 | GCGTGGTTCGAAAAA GCGGC ATGG ACCGC ACCAATGTGTACCGC Pnap_4425 337056 - 337331 + | response regulator receiver protein Pnap_4426 337902 - 337441 - | hypothetical protein Pnap_4427 338196 - 337915 - | hypothetical protein Pnap_4428 338539 - 338216 - | hypothetical protein Pnap_4429 339147 - 338536 - | hypothetical protein TERM 455 339184 - 339173 - R 74 -7.2 -4.13767 | CCGGGGATTTTAAAA GCCG TGCG CGGC CTTGACCAGCGCCAG Pnap_4430 340312 - 339167 - | hypothetical protein TERM 456 339566 - 339552 - G 73 -7 -4.38712 | overlap 339553 TGCACGCCCATAAAA TCGCCG CCC CGGCGG TGCGCGGTGACCTCC TERM 457 339831 - 339821 - G 84 -8.2 -4.48987 | opp_overlap 339821 339820 339818 GGGCCAGAAGTAAAA CGCC TCG GGCG CTGTTTCTTGCTGGC TERM 458 340238 - 340289 + g 73 -6.4 -4.28432 | gap 1, overlap 340240 GGGCGCGGGCGTGCC GCGCGA-GGCGCACACCTGCAGC CACAGCC GCTCCAGGCCCGCGCCATCGCTC TTTTGGGTTCCCGTT Pnap_4431 341386 - 340322 - | phage integrase TERM 459 341118 - 341151 + g 75 -4.3 -4.75309 | overlap 341119 TACAGGTCGTGCAGC ACGCGCCAGTAGCGC CGAA GCGTCACGGGCGAGG TTTTCTTGGATTTGG Pnap_4432 343025 - 341958 - | hypothetical protein TERM 460 342565 - 342549 - G 75 -4.4 -4.73388 | gap 1 AATGTCGAGCAAAAA GCGCAGC TCAG GCTG-GC CGGTGTTGACATCAT TERM 461 343058 - 343039 - R 81 -12.1 -3.53091 | ATGGTGCGCGTGAAA CCCCGGG GTTCAG CCCGGGG AGGTAGAACGCCGGC Pnap_4433 343594 - 343022 - | hypothetical protein TERM 462 343060 - 343095 + g 72 -2.4 -4.76213 | gap 1, opp_overlap 343067 343068, overlap 343064 343069 GGTTCAGCCCGGGGA GGTAGAACGCCGGCGGC TGT GCCGCCGA-GTTCTTGG TTTTCTTGACTTTCT TERM 463 343064 - 343091 + g 81 -12 -3.82864 | gap 1, opp_overlap 343067 343068, overlap 343060 343069 CAGCCCGGGGAGGTA GAACGCCGGCGGC TGT GCCGCCGA-GTTC TTGGTTTTCTTGACT TERM 464 343069 - 343088 + g 82 -11.4 -4.0219 | gap 1, opp_overlap 343067 343068, overlap 343064 343060 CGGGGAGGTAGAACG C-CGGCGGC TGT GCCGCCGAG TTCTTGGTTTTCTTG TERM 465 343170 - 343182 + g 71 -9.1 -3.71873 | CCGAGGATCAGTTCC GCCAC GGT GTGGC TTTCGATCTGCGTCG TERM 466 343379 - 343358 - G 74 -10.1 -3.75153 | opp_overlap 343366, overlap 343360 CTTGCGCAAGCCAAA GAGCTTGCC CGTC GGCAAGCGC TGCTGACTGTGCCGG TERM 467 343377 - 343360 - G 71 -11.3 -3.46068 | opp_overlap 343366, overlap 343358 TGCGCAAGCCAAAGA GCTTGCC CGTC GGCAAGC GCTGCTGACTGTGCC Pnap_4434 344595 - 343636 - | transposase, IS4 family protein TERM 468 343954 - 343969 + g 83 -11.8 -4.08706 | opp_overlap 343929, overlap 343950 GCCGCACCCGGCAAT GGCCGC ACGG GCGGCC TTTGTATCGTAGGCA TERM 469 344515 - 344539 + g 73 -11.3 -3.62046 | opp_overlap 344517 ATTGCCCCGCTCAAT CAGGCCCGCGT TGT ACTCGGGCCAG TTCTTGACCCGGTAG TERM 470 344685 - 344666 - H 100 -16.4 -3.68569 | CGATTTATGCAACAA CGCCGCGC AAGC GCGCGGCG TGCGCTTCGGGCGCC Pnap_4435 344685 - 344867 + | DNA integration/recombination/invertion protein Pnap_4436 345916 - 344981 - | DNA/RNA non-specific endonuclease Pnap_4437 348892 - 345938 - | hypothetical protein Pnap_4438 350694 - 348889 - | hypothetical protein TERM 471 350323 - 350354 + g 82 -5.8 -4.86621 | gap 1, opp_overlap 350319 350323 350322 ATCTATGACAACAAT GCTGCACAGCCTGCG CAT TGCAAGCAGTG-AGC TTTTTGATTCGGCCT Pnap_4439 353246 - 350694 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 472 352074 - 352094 + g 70 -12.5 -2.96216 | opp_overlap 352071 352072 CTCAGCGTCAAATGC GGGGTCGGC TTG GCCGAGCCC TATCTCCTCATCCAG TERM 473 352470 - 352455 - G 70 -7.6 -4.03413 | overlap 352459 AGCGCGCCAGACAAA TTCAGC AGGC GCTGAA ACGGTCACACGGCTG SEQUENCE gi|121583017|ref|NC_008758.1| Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, complete sequence (length 190172) TERM 1 439 - 453 + G 70 -10 -3.64703 | TTTTGGCGGGGGCGA CTTGGG GGC CCCAAG TTTCGATGCAGGCCA Pnap_4440 402 - 641 + | hypothetical protein Pnap_4441 850 - 2157 + | hypothetical protein TERM 2 2200 - 2212 + G 83 -4.8 -5.00616 | opp_overlap 2186, overlap 2186 2183 AGCTGCCGCTGCTCG GCGA CCTGT TCGC TTTTTTGAACAGCGG Pnap_4442 2160 - 2741 + | hypothetical protein TERM 3 3848 - 3835 - g 76 -9.5 -4.07568 | GGCGCTGGTGCAAAA CGCGG GCAG CCGCG GCAGCGACGCCATTG Pnap_4443 2738 - 5578 + | hypothetical protein Pnap_4444 5575 - 6525 + | hypothetical protein Pnap_4445 6926 - 6606 - | hypothetical protein Pnap_4446 7274 - 8443 + | hypothetical protein Pnap_4447 8927 - 9319 + | transposase IS3/IS911 family protein Pnap_4448 9316 - 9657 + | IS66 Orf2 family protein TERM 4 9692 - 9709 + F 80 -4.2 -5.01546 | TAAAAAGGGCAATTG GAGAAT GCACTG ATTCTC TTTTTGTGTGGATTT TERM 5 10573 - 10547 - g 72 -13.6 -2.79183 | opp_overlap 10566 TGCACGCCGACGAGA CGCCGGTGGCCA TGC TGGACCCCGGCG CGGGCAAGACCAAAC Pnap_4449 9739 - 11325 + | transposase IS66 Pnap_4451 12353 - 12108 - | hypothetical protein Pnap_4452 12777 - 12968 + | addiction module antitoxin TERM 6 13008 - 13039 + G 71 -13.7 -2.52464 | GCGCTCGACCGGTAT GGTGCTGCGCGTG ATGGAC CGCGCGCAGCAAC TCAATTACGAAAAAG Pnap_4453 13006 - 13941 + | hypothetical protein Pnap_4454 13938 - 14189 + | hypothetical protein TERM 7 14812 - 14794 - g 74 -2.2 -4.8384 | opp_overlap 14796 14801, overlap 14796 GAAAGAACTCAAAAA GGCTGCAG GCA CCGGTGCC TTCGGTTCGATCATT TERM 8 15426 - 15441 + G 80 -5.4 -4.82901 | gap 1 GCAACCGCCTCACGA TC-CGCC TGC GGCGAGA TTTTTCTGAGCAAAA Pnap_4455 14186 - 15907 + | hypothetical protein Pnap_4456 17612 - 16794 - | hypothetical protein Pnap_4457 18089 - 18520 + | hypothetical protein TERM 9 18549 - 18537 - f 85 -2.6 -5.46129 | overlap 18538 CAATAAATCAAAAAA CCGC ACGAA GCAG GCGCAGAAACCTAAC TERM 10 19055 - 19080 + G 70 -7.6 -4.07568 | TTCATACCGGATTCA CCACCTGTCT CGATGT AGACATGTGG TTTTGGGCCGGCGAC Pnap_4458 18685 - 19140 + | hypothetical protein Pnap_4459 19312 - 19848 + | hypothetical protein Pnap_4460 20136 - 20393 + | hypothetical protein TERM 11 20511 - 20535 + F 76 -8.7 -4.015 | opp_overlap 20501 20517, overlap 20517 ATTAAGGGCAAAGTG CAAAAAGTTGA TGG TCAACTTTTCG TTCTTTACTCCATAG TERM 12 20529 - 20517 - f 78 -6.3 -4.70879 | opp_overlap 20511 20517, overlap 20501 GGCAAAGTGCAAAAA GTTGA TGG TCAAC TTTTCGTTCTTTACT TERM 13 20517 - 20529 + F 75 -6.3 -4.63107 | opp_overlap 20517 20501, overlap 20511 GGCAAAGTGCAAAAA GTTGA TGG TCAAC TTTTCGTTCTTTACT TERM 14 21172 - 21191 + F 72 -3.5 -4.6821 | overlap 21175 ATACCTATTTCATTC GCAGGCA TATCTC TGCCTAC TTTTCTGTTCCCGTT TERM 15 21910 - 21925 + G 74 -2.4 -4.85782 | overlap 21911 GTTGACTGTTCCACC TCAGGC GAAG GCCGGG TTTATTTTTAACACC TERM 16 22560 - 22535 - g 100 -4.5 -5.41746 | opp_overlap 22535 22536, overlap 22536 22537 AATTGCCGAAAAAAA TTGGTGGAGCC TTAT GGCTCCGCCGC TTGTGAAAGAGAGGC Pnap_4461 21293 - 22660 + | hypothetical protein Pnap_4462 23343 - 23999 + | hypothetical protein TERM 17 24459 - 24446 - f 76 -5.3 -4.68506 | AATTAATGCCAAAAA TGCAT AAAA ATGCA GCAAAAGACGGACTT TERM 18 25111 - 25138 + G 86 -15.6 -3.58343 | CGCGAAAGTATGTGT CTCGTCAGCGCT CCGC AGCGCTGACGCG TTTGGGCGTGCTGCG Pnap_4463 24543 - 25442 + | hypothetical protein TERM 19 25695 - 25672 - g 86 -12.4 -4.13711 | opp_overlap 25667, overlap 25673 GGAAAAGAGCAGAAA GGCGCGTGCT AGGC AGCACGCGCT CGACGTGGCTTACGC TERM 20 25694 - 25673 - g 81 -15.9 -3.07142 | opp_overlap 25667, overlap 25672 GAAAAGAGCAGAAAG GCGCGTGCT AGGC AGCACGCGC TCGACGTGGCTTACG TERM 21 25821 - 25795 - g 84 -10.8 -4.11216 | opp_overlap 25795 25810, overlap 25796 GGCGCAGTGCGAAAA CCTGGTGCGGGA TTA TCCCGCAGCAGC TGCGGAATTGCTGGC TERM 22 25820 - 25796 - g 78 -14.3 -3.06515 | opp_overlap 25795 25810, overlap 25795 GCGCAGTGCGAAAAC CTGGTGCGGGA TTA TCCCGCAGCAG CTGCGGAATTGCTGG Pnap_4464 25439 - 25990 + | hypothetical protein TERM 23 26159 - 26210 + G 83 -8 -4.56775 | opp_overlap 26191 TGGCGCGGTGGCCAG GTGCTGCGCGGCTTGCAGTC GAGTTCATGGAA GACTGCAAGCCTCATGGCGC TTTTTACGCCGAGGT Pnap_4465 25984 - 26301 + | hypothetical protein Pnap_4466 26298 - 26645 + | hypothetical protein Pnap_4467 26973 - 27188 + | hypothetical protein TERM 24 28245 - 28229 - T 100 -2.3 -5.98675 | CACAAAAACAAAAAA TATCG GGGGGTA CGATA ATCGAAAATGACAAC Pnap_4468 29723 - 28632 - | parB-like partition proteins TERM 25 29261 - 29316 + g 73 -8.8 -4.08216 | gap 1 TGGCGCCTTCGGCCA CCAGCCGCGCGATGGCCGCGGCCAGGT CAG AGTTGGACA-GGTCGGCGCGCTGCTGG TTTTCGACGAGCTGC TERM 26 29831 - 29809 - H 71 -9.9 -3.53444 | GCAGTGCTTTTCAAA CCATTCACC CTTTC GGCGAATGG AAAACCTCCGTAATG Pnap_4469 30096 - 31088 + | Rad3-related DNA helicases-like protein Pnap_4470 32176 - 31163 - | TrfA TERM 27 32423 - 32447 + r 95 -15.1 -3.62096 | opp_overlap 32425 CGGGCTGATTTCAAT GATGTACCGCT AAT AGCGGTGCATC TTTACGCTAATAGCG TERM 28 32765 - 32785 + r 85 -4.7 -5.27779 | opp_overlap 32770, overlap 32767 32770 CCTCAGGATAGAACC TACAAGACA AGA TGTCATGTG TTTTTTGCTCTTGCA Pnap_4471 34173 - 33169 - | parB-like partition proteins Pnap_4472 34868 - 34170 - | cobyrinic acid a,c-diamide synthase TERM 29 34940 - 34950 + r 85 -2.6 -5.52384 | opp_overlap 34940 TAACATTAGAAATAG TAAA TTA TTTA TTTTTTTCATGCAAG TERM 30 35359 - 35343 - R 95 -10.1 -4.75309 | opp_overlap 35342 35345 GCAAACTGAAGAAAA CACCCGG CAT CCGGATG GGTTAGTGTTCTAGG TERM 31 35527 - 35572 + r 95 -17.9 -2.81173 | opp_overlap 35527 35530 35532, overlap 35529 AAAATTTATAAAAAA GAATATTCTAGAGAGTGTTCT GCGC AGAACACTCTCTAGAAAAATC TCTCGTCAAGTTCGT TERM 32 35572 - 35527 - R 100 -17.9 -5.35222 | opp_overlap 35527 35529, overlap 35530 35532 AAAATTTATAAAAAA GAATATTCTAGAGAGTGTTCT GCGC AGAACACTCTCTAGAAAAATC TCTCGTCAAGTTCGT TERM 33 35529 - 35570 + r 86 -14.7 -2.95223 | opp_overlap 35527 35530 35532, overlap 35527 AATTTATAAAAAAGA ATATTCTAGAGAGTGTTCT GCGC AGAACACTCTCTAGAAAAA TCTCTCGTCAAGTTC TERM 34 35569 - 35530 - R 100 -18.2 -4.73105 | opp_overlap 35529 35527, overlap 35527 35532 ATTTATAAAAAAGAA TATTCTAGAGAGTGTTCT GCGC AGAACACTCTCTAGAAAA ATCTCTCGTCAAGTT TERM 35 35567 - 35532 - R 100 -20.8 -3.96386 | opp_overlap 35529 35527, overlap 35530 35527 TTATAAAAAAGAATA TTCTAGAGAGTGTTCT GCGC AGAACACTCTCTAGAA AAATCTCTCGTCAAG Pnap_4473 38006 - 36177 - | phage integrase family protein TERM 36 39211 - 39233 + r 71 -10.6 -3.2794 | GACCGTCTGGGAGTC GTCATCAGGG TTG CCTTGATGGC TTGGTCTGGGTGCGG Pnap_4475 41004 - 39859 - | histidine kinase Pnap_4476 41568 - 41278 - | hypothetical protein TERM 37 43047 - 43033 - R 73 -5.6 -4.56597 | overlap 43041 GCGCTGCTCGAAAAA CCCGAC AAG GCCAGG CTGAGCGCCGCGCCG TERM 38 43219 - 43194 - R 76 -10.5 -3.62572 | gap 1, overlap 43199 CACGATCACGGCAAA GGCAAG-GATGC CCA GCATCACCTGCC CGGCCGGGGGCAGTC TERM 39 43252 - 43199 - R 74 -11.5 -3.28497 | gap 1, overlap 43194 TCACGGCAAAGGCAA GGATGCCCAGCATCACCTGCCCGGCC GGG GGCAGTCCTGGCGCCGC-GGGCATCC ACACAATGGCAACGA Pnap_4479 46463 - 43641 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC Pnap_4480 46798 - 46580 - | putative transposase TERM 40 47816 - 47834 + G 100 -5.3 -5.84381 | ATCAATTGGTACCGC GCTCGAT GGGAA ATTGAGC TTTTTTTCTTGGTGC TERM 41 48056 - 48043 - g 81 -3.7 -5.07486 | CATCCTGAACAAAAA GCCCG TGCC CCGGC AGACTCCCCCACTCA Pnap_4481 46898 - 48223 + | hypothetical protein Pnap_4482 48509 - 48225 - | transposase family protein Pnap_4483 49057 - 48509 - | hypothetical protein TERM 42 48684 - 48705 + g 73 -3.5 -4.81359 | overlap 48676 48685 48688 CCGGACAGGGAAACG CTGTGGCCC AGGT GGGCCTCGA TTTTCTCTTTCAGTT TERM 43 49151 - 49116 - H 81 -8.3 -4.29326 | gap 1, opp_overlap 49117 GGGAAATGGAATAAA TCACG-CCTTCGCGTG TCATT CTCGCGAAGGGCTTGA GCGAATTCAGTACGC TERM 44 49779 - 49769 - g 88 -6.8 -5.20735 | GCAACAAAAAAGAAA GCTC ATC GAGC AGGGATTTGGCTGGG Pnap_4484 49497 - 49931 + | transposase, IS4 family protein TERM 45 50953 - 50943 - g 72 -2.4 -4.67608 | GACGCCAAGACAAAA CTCC AGC GGGG GCAAAAACAGTCTGG Pnap_4485 50164 - 51234 + | transposase IS116/IS110/IS902 family protein TERM 46 51622 - 51609 - f 72 -2.4 -4.85129 | ATGACATAGTAAAAA TAGG AGTGCG CCTA ACATCCGATGGATCA Pnap_4486 52320 - 52772 + | hypothetical protein Pnap_4487 53119 - 53355 + | heavy metal transport/detoxification protein Pnap_4488 53352 - 54212 + | hypothetical protein Pnap_4489 54236 - 54673 + | heavy metal transport/detoxification protein Pnap_4490 54761 - 55153 + | hypothetical protein Pnap_4491 55228 - 57897 + | copper-translocating P-type ATPase Pnap_4492 58522 - 58788 + | hypothetical protein Pnap_4493 59253 - 60926 + | hypothetical protein Pnap_4494 60942 - 62774 + | asparagine synthase (glutamine-hydrolyzing) TERM 47 63483 - 63430 - g 74 -11.9 -3.41051 | gap 4, opp_overlap 63435 CGAGTTGCAGCACAA GCTCGGCA--TCGCGGT-GGCCCGGCA AACC TACCGGGCCTACCGCGACCTGCTG-GC TTCGACGCGCTGGCA Pnap_4495 62771 - 63877 + | transaldolase TERM 48 64330 - 64286 - g 78 -15.7 -2.71011 | overlap 64272 64326 64327 ACCGGGGCCGAAGCA GCGGGCTGGCCGACGGCAT CGTCATC ACGCCGTCGCACAACCCGC CCGACAGCGGCGGCT TERM 49 65402 - 65387 - g 83 -7.5 -4.62336 | AGGTCAGCGCAAAAA GCGGC TGGTTC GCCGC GCGGCCTTCGGGCAC Pnap_4496 63874 - 65535 + | phosphoglucomutase Pnap_4497 65532 - 67904 + | putative phosphoketolase TERM 50 67927 - 67966 + G 73 -3.5 -4.77036 | gap 1 CCTGGGTCGGCCCGT GCTGGCCTTGAACG-CGG GCTCG TCGTCGCTCAAGTTCGGC TTTTTCATGGTGGGC Pnap_4498 67901 - 68971 + | acetate kinase Pnap_4499 68992 - 71058 + | transketolase Pnap_4500 71745 - 71029 - | hypothetical protein Pnap_4501 72817 - 71792 - | 6-phosphogluconate dehydrogenase-like protein TERM 51 74004 - 73990 - g 70 -10 -3.54424 | GCCGATGTCTGGAAA GTCGAG GGC CTCGAC AACCAAGGCGACTGC Pnap_4502 73378 - 74346 + | hypothetical protein TERM 52 75403 - 75421 + G 73 -8.8 -4.09243 | TTGCGCCTGAGATCG TGCTGCCG ACA CTGCAGCA TTTTCAGGACGTCTA Pnap_4503 74343 - 75674 + | hypothetical protein Pnap_4504 75735 - 76118 + | hypothetical protein Pnap_4505 76939 - 76277 - | transposase Pnap_4506 77409 - 76936 - | transposase Pnap_4507 78565 - 77447 - | phospholipase D/transphosphatidylase Pnap_4508 79122 - 78580 - | hypothetical protein TERM 53 79525 - 79541 + G 82 -2.9 -5.1675 | GCGCAGTCAGAGGCA CGGCT TGCTCAC GGCCG TTTTTTCATCGGTGA Pnap_4509 79505 - 79906 + | hypothetical protein Pnap_4510 79924 - 80322 + | hypothetical protein TERM 54 80341 - 80373 + F 81 -3.6 -5.15167 | gap 2 CCTGATCACTTGACG CTTGCCTGAATGCATT TCT GATGCATT--GGCAGG TTTTTATTCGTGCTC TERM 55 80737 - 80723 - g 72 -4.2 -4.57569 | CCACGGCTTGAAAAA CGCC AGCTCAG GGCG CAAAAGTTCGAGCGC Pnap_4511 80399 - 81685 + | outer membrane efflux protein TERM 56 82596 - 82571 - g 77 -13.2 -3.53811 | CCGAGGTGCCCGAAA GCCAGGCCGC CTTGGT GCGGCCAGGC GCCAAGGTGCAGGCG Pnap_4512 81682 - 83340 + | RND family efflux transporter MFP subunit TERM 57 84242 - 84224 - g 72 -4.4 -4.56597 | overlap 84225 84235 GCGCTCGGGCAAAAA TGCGCTGG AAA CCATCGCG GCCGTCAAGGCCAAA Pnap_4513 83337 - 86504 + | CzcA family heavy metal efflux protein TERM 58 86678 - 86701 + F 72 -11.8 -2.74292 | opp_overlap 86666, overlap 86667 86682 ACACCCGCGCCAGGC GCAGCACCAT ATTC ATGGTGTTGC TGGTGTGGTTGTTTG Pnap_4514 86692 - 87102 + | hypothetical protein Pnap_4515 87292 - 87756 + | hypothetical protein Pnap_4516 87770 - 88030 + | hypothetical protein TERM 59 89219 - 89197 - g 91 -19.2 -2.94735 | overlap 89194 89190 ATGGAAAACGAAGGA CCCGCCATGC CCG GCATGGCGGG AATGGCGGGAATGGA Pnap_4517 88165 - 89808 + | Bilirubin oxidase Pnap_4518 89859 - 90137 + | hypothetical protein TERM 60 90569 - 90583 + G 81 -7.1 -4.73614 | GCCGTGATTCGCCAT CCCCA GTACG TGGGG TTTGTTTTGATCCTG Pnap_4519 90140 - 90808 + | isoprenylcysteine carboxyl methyltransferase Pnap_4520 90858 - 91151 + | heavy metal transport/detoxification protein Pnap_4521 91210 - 91422 + | hypothetical protein Pnap_4522 91582 - 91824 + | heavy metal transport/detoxification protein TERM 61 91857 - 91845 - g 91 -4.8 -5.28826 | overlap 91854 AAAGGCCATAAAAAA TCCG AAGAA CGGA CAGGGGAAGCTGCCG Pnap_4523 91821 - 92675 + | hypothetical protein Pnap_4524 92699 - 95170 + | copper-translocating P-type ATPase Pnap_4525 95459 - 96223 + | short-chain dehydrogenase/reductase SDR Pnap_4526 96224 - 98005 + | acetate kinase Pnap_4527 98009 - 99853 + | hypothetical protein Pnap_4528 99937 - 101208 + | major facilitator superfamily transporter Pnap_4529 101310 - 101453 + | heavy metal translocating P-type ATPase Pnap_4530 101560 - 101721 + | creatininase Pnap_4531 101889 - 102047 + | hypothetical protein Pnap_4532 102127 - 102573 + | transposase IS3/IS911 family protein TERM 62 102660 - 102689 + G 71 -5.5 -4.32857 | overlap 102654 102662 GTGGTCGAGCACGGC CTGGGCCTGGACG CGTT TGCCCAGGCGCTG TTTGTCTTTGCCAAC Pnap_4533 102561 - 102914 + | IS66 Orf2 family protein TERM 63 104084 - 104103 + G 74 -9.2 -3.88291 | opp_overlap 104073 104050 104074 AGAACGCGCGCGGCC CCGAGCAG CTCG CTGCGCGG TTTCTCGCGCTCATC Pnap_4534 102997 - 104595 + | transposase IS66 TERM 64 104678 - 104653 - f 72 -11.2 -3.09516 | opp_overlap 104642 104657 CTGCTGAGGATGTAA GGTACGCGGT TAATTG ACCGCATACC TTCGACCTACCTCAT TERM 65 104830 - 104813 - f 79 -2.8 -5.2189 | overlap 104805 CCAACCATGAAAAAA TTCAAA TGATTT TTTGAA GCGTGTAATGCAATT TERM 66 105317 - 105294 - g 87 -6 -5.24129 | opp_overlap 105298, overlap 105315 GCTGCGCAGAAAAAA GAAATTGCCC AGCT GGACAAATTC TTGGCGAAGAACGGT Pnap_4535 105063 - 105359 + | hypothetical protein Pnap_4536 105920 - 106324 + | hypothetical protein Pnap_4537 106515 - 106961 + | hypothetical protein Pnap_4538 106975 - 107235 + | hypothetical protein Pnap_4539 107317 - 107619 + | hypothetical protein Pnap_4540 107616 - 108266 + | isoprenylcysteine carboxyl methyltransferase Pnap_4541 108358 - 108585 + | heavy metal transport/detoxification protein Pnap_4542 108840 - 109493 + | hypothetical protein TERM 67 110564 - 110591 + G 86 -8.4 -4.65895 | overlap 110564 CCAATCTGACAGCGA TGGTGCTTGGCT ACAA AGCCAAGCCCAA TTTTTCCGTAGACAA TERM 68 110564 - 110590 + G 72 -11.7 -3.39216 | gap 1, overlap 110564 CCAATCTGACAGCGA TGGTGCTTGGCT ACAA AGCCAAGC-CCA ATTTTTCCGTAGACA Pnap_4544 110062 - 110694 + | LemA family protein Pnap_4545 110691 - 111551 + | hypothetical protein Pnap_4546 111554 - 112051 + | hypothetical protein TERM 69 112154 - 112181 + F 80 -9.2 -4.15044 | TTGACGTTTCTCAGG TGAGCCGCTACT AGCT AGTAGTGACTCA TTTATTCAGGGGCAC TERM 70 114152 - 114142 - g 76 -8.2 -4.15565 | CTGACCACGGCAAAA GCCG TTG CGGC CCGCCTGGGCATTGA Pnap_4547 112201 - 114597 + | heavy metal translocating P-type ATPase Pnap_4548 114747 - 115790 + | YVTN beta-propeller repeat-containing protein Pnap_4549 115790 - 116215 + | hypothetical protein Pnap_4550 117054 - 116701 - | hypothetical protein TERM 71 116821 - 116845 + g 78 -4.9 -4.8048 | opp_overlap 116823, overlap 116797 116825 CTTGACCTGGAACAC CATGGTCATGC CCG GCATGTCTAAG TTTTTGATCTCGCCA TERM 72 116922 - 116942 + g 76 -6.8 -4.43879 | gap 1, overlap 116919 CGCCTTCGGCCATGT CGGCTGCCG CTGC CGGC-GCTG TTTTGCTTGACTCCT TERM 73 117145 - 117167 + r 74 -7.6 -4.0896 | opp_overlap 117143 117144, overlap 117132 TTCCTCAGATCAATG GGCATGCCCA GCC TGAGCTTGCC TTTTGGCAGGGGTTT Pnap_4551 117654 - 117139 - | blue (type1) copper domain-containing protein Pnap_4552 119137 - 117704 - | multicopper oxidase, type 3 TERM 74 118223 - 118248 + g 71 -8.3 -3.85518 | gap 1 CAGGAATTCCAGCTG CCGCATCTGGCC GAC GGCCACAT-CGG TTGTTACTTCATATT Pnap_4553 120602 - 119184 - | putative copper resistance-related lipoprotein TERM 75 119933 - 119982 + g 76 -10.9 -3.68222 | gap 3, overlap 119931 GCTGGCTGGAGGCCA GCTGC-GC-TGCGCTGTCGGCATA AAAGC TTTGCTGAC-GCGCACGCTGCAGC TTGTTGAAATTGCCC Pnap_4554 120954 - 120616 - | hypothetical protein TERM 76 121072 - 121054 - R 83 -14.6 -2.77899 | overlap 121051 121056 TGCCGGCAGCAAGTA CAGGCCCA ATA TGGGCCTG AGCGTCAGGAAATGG TERM 77 121070 - 121056 - R 71 -11.4 -2.93723 | overlap 121054 121051 CCGGCAGCAAGTACA GGCCCA ATA TGGGCC TGAGCGTCAGGAAAT Pnap_4555 121523 - 121077 - | hypothetical protein TERM 78 121204 - 121166 - G 100 -15.2 -4.11216 | opp_overlap 121168 TGCCCAGGCTGAAAA CAGTAGCGACGCCAGCGG GCG CCGCAGACAGCGCCACTG TATGACAGACCTGGC Pnap_4556 121966 - 121685 - | hypothetical protein Pnap_4557 123563 - 122187 - | heavy metal sensor signal transduction histidine kinase TERM 79 123573 - 123540 - G 100 -10.3 -5.1848 | gap 1, opp_overlap 123540, overlap 123542 AATTAAGCCAAAAAA TGCGCTGGCCAGCGCG ATC CGCA-TAGCCAGCGAA TTTCGAGACCAGAAG Pnap_4558 124288 - 123608 - | two component heavy metal response transcriptional regulator Pnap_4559 124443 - 124817 + | hypothetical protein Pnap_4560 124858 - 125208 + | hypothetical protein TERM 80 125341 - 125362 + F 86 -6.5 -4.98522 | opp_overlap 125310, overlap 125344 GCTTGGTTTTTACCG CTGGCCTGA AAAA TCAGGCTTG TTTTTATGTGAAATT TERM 81 125344 - 125359 + F 89 -9 -4.58943 | overlap 125341 TGGTTTTTACCGCTG GCCTGA AAAA TCAGGC TTGTTTTTATGTGAA TERM 82 126174 - 126151 - g 87 -6 -5.24129 | GCCGCGCAGAAAAAA GAAATTGCCC AACT GGACAAATTC CTGGCGAAGAATGGC Pnap_4562 125941 - 126216 + | hypothetical protein Pnap_4563 126334 - 127275 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pnap_4564 128887 - 127625 - | hypothetical protein TERM 83 127828 - 127814 - G 71 -5.6 -4.27512 | overlap 127811 CGCCACAAGAAACAA GGTGCT TGC AGCGCC CACTTGCGTACCCAG TERM 84 129607 - 129596 - H 71 -4.4 -4.56358 | opp_overlap 129596, overlap 129597 GACAGCGATAGAAAA CTCT ACCC AGAG TTGTACTCCCGTTAG Pnap_4566 129919 - 131268 + | outer membrane efflux protein TERM 85 131306 - 131290 - f 87 -2.3 -5.74086 | AAACTAAATAAAAAA CAAATCA TGA TTATTTG GAAAAAACTGAACGT TERM 86 131342 - 131314 - g 77 -2.5 -5.03715 | gap 1, opp_overlap 131315, overlap 131315 ATTATTTGGAAAAAA CTGAACGTTTGC TTCCTG GCAA-CGTTCAT TGCTGCAACATCGTT Pnap_4567 131296 - 131856 + | hypothetical protein TERM 87 131949 - 131976 + G 74 -9.8 -3.71527 | gap 1, opp_overlap 131945 131949 TCGGGAGATCACGAA GGT-GGTCACGGC GCT GCCGAGGCCGACC TTTCGGTCATTGGCA Pnap_4568 131853 - 132986 + | hypothetical protein TERM 88 134636 - 134655 + G 76 -5.6 -4.56775 | overlap 134637 CACTGGCGGCATTGG TGGCAGCG GTGG CGGTGCCG TTTTTCCCGACCACT Pnap_4569 133000 - 136119 + | CzcA family heavy metal efflux protein Pnap_4570 136180 - 136557 + | hypothetical protein TERM 89 136632 - 136621 - T 75 -5.8 -4.55128 | opp_overlap 136621 ATTTCTAAACCAAAA CGTC TGTT GACG TTTGCAATCAGTAGA Pnap_4571 137125 - 136640 - | hypothetical protein Pnap_4572 138251 - 137238 - | phage integrase TERM 90 138008 - 137973 - G 72 -11.8 -3.29511 | gap 1, opp_overlap 137974 137983 137984, overlap 137974 CGCATGGTCGTACAA GTCGCGCAGCACGCGCC AGT AGCGC-CGCCGCGTGAC GGGCGAGGTTTTTTT TERM 91 137983 - 138016 + g 100 -4.3 -5.42259 | opp_overlap 137973 137974, overlap 137974 137984 TACAAGTCGCGCAGC ACGCGCCAGTAGCGC CGCC GCGTGACGGGCGAGG TTTTTTTGAGGCTCG Pnap_4573 139333 - 138452 - | hypothetical protein TERM 92 139057 - 139031 - G 71 -10.8 -3.53012 | GCTGGCCGGCTCAAA GACGATGCCATC CTC GACGGCAACGCC AGCGATGTCGCGAAA Pnap_4574 139961 - 139353 - | hypothetical protein TERM 93 140109 - 140121 + r 71 -10.5 -3.28712 | opp_overlap 140107 140106 AACGACGAGCAAGTC GCGCC CTG GGCGC TTGTGGCCGACAGGC TERM 94 141286 - 141329 + r 71 -9.5 -3.57144 | overlap 141257 TGATGCCGCTGTCGC GCAGCGAGTTGCTG-GCGCTG CAGA CGGCGCTCAGC-GCACGCGGC TTTGACAGTGGCACG Pnap_4577 142213 - 141836 - | hypothetical protein Pnap_4578 142679 - 143044 + | histone family protein nucleoid-structuring protein H-NS TERM 95 143130 - 143165 + F 87 -13.4 -3.23853 | opp_overlap 143135, overlap 143135 CAAGCTGCCCGCAAA AAAAAGCCTCAGCACA TGGA TGCGCTGAGGCTTTTG TCTTGGTTGCGCGGG TERM 96 143135 - 143160 + F 100 -13.3 -4.73864 | opp_overlap 143135, overlap 143130 TGCCCGCAAAAAAAA GCCTCAGCACA TGGA TGCGCTGAGGC TTTTGTCTTGGTTGC TERM 97 143160 - 143135 - f 100 -15.5 -5.75342 | opp_overlap 143135 143130 TGCCCGCAAAAAAAA GCCTCAGCACA TGGA TGCGCTGAGGC TTTTGTCTTGGTTGC Pnap_4579 143907 - 144353 + | RNP-1 like RNA-binding protein TERM 98 144461 - 144426 - f 89 -16.4 -2.66316 | opp_overlap 144431, overlap 144431 GCGCTGAGCACAGCA TAAAAGGCTTCCAAAC TTCG GTTTGGAAGCCTTTTT ACCTTGAAGGGCCTG TERM 99 144431 - 144456 + F 100 -16.3 -4.74103 | opp_overlap 144426 144431 GAGCACAGCATAAAA GGCTTCCAAAC TTCG GTTTGGAAGCC TTTTTACCTTGAAGG TERM 100 144456 - 144431 - f 100 -16.3 -4.52047 | opp_overlap 144431, overlap 144426 GAGCACAGCATAAAA GGCTTCCAAAC TTCG GTTTGGAAGCC TTTTTACCTTGAAGG Pnap_4580 144864 - 145745 + | glutathione S-transferase domain-containing protein TERM 101 145869 - 145859 - g 73 -8.2 -4.07568 | TTTTCTCGCCGAAAA GGGC GTT GCCC ATGAAACGGTCCAGG TERM 102 146075 - 146063 - g 83 -9.1 -4.2558 | opp_overlap 146071, overlap 146071 146072 CACCCCGCACGAAAA GGCGA AAA TCGCC AGCTGGAACTGGCGC TERM 103 146090 - 146071 - g 71 -5.6 -4.28651 | opp_overlap 146071, overlap 146063 146072 ACGAAAAGGCGAAAA TCGCCAGC TGGA ACTGGCGC ATTGAGTTCGAGGGA Pnap_4581 145791 - 146423 + | glutathione S-transferase domain-containing protein Pnap_4582 146614 - 147075 + | hypothetical protein TERM 104 147417 - 147436 + F 95 -6.4 -5.40072 | opp_overlap 147419, overlap 147432 147434 CTTTCGATGTTATGA CAGTCCAG ATAA CTGTACTG TTTTTTTAAACAGCA TERM 105 148385 - 148371 - g 78 -6.4 -4.66163 | AGGTCCATCGAAAAA CGGAAA AGC TCTCCG GTCTCAGTGAAAAGA Pnap_4583 147500 - 148423 + | hypothetical protein TERM 106 149376 - 149386 + G 72 -2.4 -4.73108 | opp_overlap 149376 CAATTCGGACAAAAC GAGC GTA GCAC TTTTGGTTTTCTAGC TERM 107 149779 - 149768 - g 75 -3.6 -4.84017 | opp_overlap 149773 AATCCTCTACAAAAA GCAC ATCA GCGC CTGGTCGGTTTTCGA TERM 108 150788 - 150807 + G 71 -5.6 -4.25104 | overlap 150789 CCACAAAGGAAACGT CGCCGTCT ATAA GGACGGCA TTTTCATCGCGCGAA TERM 109 150873 - 150863 - g 76 -6.8 -4.4261 | opp_overlap 150863, overlap 150848 CCTGCAAGACGAAAA GCGA TTC TCGC TTCGCTGGATCGTCA TERM 110 151541 - 151514 - g 70 -10.6 -3.63968 | gap 1, overlap 151506 GGTCAAAGGCCGAAA GCCCACCAGCGAA GCG TTCGC-GGTGGTC ATGGGCGCGGGTGCC Pnap_4584 148416 - 151751 + | putative ATP-binding protein TERM 111 152250 - 152264 + G 74 -5.6 -4.50993 | overlap 152252 TTACGACTGGCGCTC GCGCAG CGG CTGCAC TTTCTGTTTCTTTCA Pnap_4585 151744 - 152583 + | phosphoadenosine phosphosulfate reductase Pnap_4586 154620 - 152593 - | hypothetical protein TERM 112 153707 - 153741 + g 77 -4 -4.88405 | TGGATGCGCTGCATG GCAGCGGCATCGAGGT TCC ACAAGGTTGCCGCCGC TTTTGTTTGAGCATT Pnap_4587 156971 - 154617 - | histidine kinase TERM 113 155517 - 155530 + g 74 -2.4 -4.87893 | opp_overlap 155527 CTCCTCCGTGGATTC TTGC GATAAG GCAA TTTTTGCTTGGGCTT TERM 114 156330 - 156356 + g 76 -5.8 -4.60487 | opp_overlap 156320, overlap 156331 156332 GAAGACTTCTTCTGA AGTCTCGATGGG GAC CTCATCGAGAAA TTTTTGCGGATCGTC TERM 115 156571 - 156561 - G 83 -4.6 -4.99435 | overlap 156562 CCCAATAACTAAAAA CCGC GAA GCGA CGTCATCAGCACTCA TERM 116 156861 - 156873 + g 73 -3.3 -4.7373 | CACCCGAGGAGACCT CGCGT CAA AAGCG TTTTTAATCAGCTCA Pnap_4588 162444 - 157006 - | cell divisionFtsK/SpoIIIE TERM 117 161061 - 161043 - G 72 -3.8 -4.65895 | CTGGGTATTTAAAAA GCGGATCT GGC AAATCGGC GGTCCCCATTCTCAG Pnap_4589 163967 - 162441 - | hypothetical protein Pnap_4590 164860 - 163964 - | hypothetical protein TERM 118 164392 - 164408 + g 79 -9.5 -4.21812 | ATCCGCCGGAACTCG CGACAAA CAA TTTGTCG TTGTTTTCGATGAGC TERM 119 164608 - 164598 - G 74 -2.4 -4.86385 | ACCGTGAAAAAGAAA CGGC GAC GCTG AGTTTGAAGCCGGGC Pnap_4591 164912 - 165424 + | hypothetical protein TERM 120 166240 - 166225 - T 95 -6.8 -5.32944 | GCCAGAAGCAAAAAA CCCCGA AAAC TCGGAG CTCAAACTTGATCAG Pnap_4592 166830 - 166252 - | hypothetical protein TERM 121 166832 - 166817 - G 91 -9 -4.52669 | AACAAGCGAAATAAA GCGTGA AGGT TCACGC GTGTAGCCCCACCCA Pnap_4593 167396 - 166827 - | prevent-host-death protein TERM 122 166898 - 166909 + g 74 -5.8 -4.50159 | opp_overlap 166898 CCATATCGGAGACGA TGGC TTCA GCCA TTTCTTTGGGTTGCA TERM 123 167509 - 167493 - g 71 -10.9 -3.53343 | opp_overlap 167501, overlap 167501 AATTGCTGGGCCAAA CGCAAGA CCT TCTTGCG CGCAGCTAAAGGCCC Pnap_4594 167433 - 167678 + | hypothetical protein TERM 124 168574 - 168562 - g 81 -2.7 -5.20783 | ACTTAAACAGAAAAA CAATG ATT CATTA CGCGAGTGCCCTCCT TERM 125 168600 - 168610 + G 76 -6.8 -4.52589 | overlap 168594 CTCCTATCTGGGACC CACG TCA CGTG TTTTCTATGGCAGAA Pnap_4595 168101 - 168976 + | hypothetical protein Pnap_4596 170477 - 170094 - | transposase TERM 126 170695 - 170706 + r 71 -7.2 -3.93817 | overlap 170694 ACGGGGCGCGGCAAG CCGC GAGG GCGG TCTTTTTAAGATGTC Pnap_4597 170971 - 170759 - | transposase IS3/IS911 family protein Pnap_4598 171211 - 171600 + | hypothetical protein TERM 127 171624 - 171679 + G 70 -10.3 -3.54459 | gap 2, opp_overlap 171626 171630 171631, overlap 171625 171626 AACGCAATCGACGAA AACG-AAG-GCGTTGCCGGAGCCCCCG AAGC CGGGGGCTCCGGCGCCGCGCGTGTGGA TTTCGAGCAGCTTCG TERM 128 171625 - 171678 + G 72 -13.8 -2.72461 | gap 2, opp_overlap 171626 171630 171631, overlap 171624 171626 ACGCAATCGACGAAA ACG-AAG-GCGTTGCCGGAGCCCCCG AAGC CGGGGGCTCCGGCGCCGCGCGTGTGG ATTTCGAGCAGCTTC TERM 129 171675 - 171626 - g 100 -16.9 -4.30978 | opp_overlap 171626 171625 171624, overlap 171630 171631 CGCAATCGACGAAAA CGAAGGCGTTGCCGGAGCCCCCG AAGC CGGGGGCTCCGGCGCCGCGCGTG TGGATTTCGAGCAGC TERM 130 171626 - 171675 + G 87 -19.1 -2.64155 | opp_overlap 171626 171630 171631, overlap 171625 171624 CGCAATCGACGAAAA CGAAGGCGTTGCCGGAGCCCCCG AAGC CGGGGGCTCCGGCGCCGCGCGTG TGGATTTCGAGCAGC TERM 131 171671 - 171630 - g 100 -22.9 -3.72073 | opp_overlap 171626 171625 171624, overlap 171626 171631 ATCGACGAAAACGAA GGCGTTGCCGGAGCCCCCG AAGC CGGGGGCTCCGGCGCCGCG CGTGTGGATTTCGAG TERM 132 171670 - 171631 - g 100 -26.4 -2.82521 | opp_overlap 171626 171625 171624, overlap 171630 171626 TCGACGAAAACGAAG GCGTTGCCGGAGCCCCCG AAGC CGGGGGCTCCGGCGCCGC GCGTGTGGATTTCGA Pnap_4599 171603 - 172796 + | AAA ATPase Pnap_4600 172879 - 173319 + | hypothetical protein TERM 133 173338 - 173359 + F 86 -12.3 -3.83026 | opp_overlap 173338 TTATTTTTGCGTAAA TCCCGGTGA TTAA TCGCCGGGA TTTAATCTAAAAAAC TERM 134 173359 - 173338 - f 71 -10.1 -3.53444 | opp_overlap 173338 TTATTTTTGCGTAAA TCCCGGTGA TTAA TCGCCGGGA TTTAATCTAAAAAAC Pnap_4601 173898 - 174209 + | hypothetical protein Pnap_4602 175015 - 174395 - | radical SAM domain-containing protein Pnap_4603 176886 - 175012 - | ATPase TERM 135 175198 - 175214 + g 74 -9.3 -3.92592 | CACCTGTCGGACGAT CGCGGTC AGA GCCCGCG TTTCGTCTTCGAACT TERM 136 175236 - 175248 + g 85 -3.3 -5.30616 | CTTCGAACTCGACTT TGGCG ATG CCCCA TTTTTCTTTCAGTCG TERM 137 175513 - 175482 - G 71 -12.5 -3.05844 | gap 1 TGTTGGAGGTGAAGA CGATCACGGTTTCC GAGAA GGAAACCGT-ATCG CCCTTGCCGTCGGTC TERM 138 175633 - 175616 - G 78 -4.7 -4.68994 | opp_overlap 175619, overlap 175617 AGGATCAGGGAAAAA GGCCGCC GCTT GACGGCG TTGGTGAGTTGCCCA Pnap_4604 177976 - 176873 - | hypothetical protein TERM 139 176925 - 176939 + g 73 -8.6 -4.07568 | GCTTTGGCAGTGCGG TCCAGA TCG TCTGGA TTTTCCCAAACCACC TERM 140 177001 - 177017 + g 78 -6.5 -4.57073 | overlap 177000 ACTGCAGCGTGGGAA GGACCTG GTC CATGTCC TTTTTGCACGCCGTG Pnap_4605 180455 - 177990 - | nucleotide binding protein, PINc TERM 141 178162 - 178152 - G 74 -4.6 -4.63486 | opp_overlap 178161 ACTGCGCGAATAAAA CAGC GCT GCCG ACAGGATGTCGTTGT TERM 142 178546 - 178570 + g 72 -12.2 -3.33265 | overlap 178541 GCCTTGTCGTCTAGT TGGAGGGCGT TGCGT ACGTCCTCCA TTGAGTTTCTCAACT Pnap_4606 184306 - 180452 - | superfamily I DNA/RNA helicase TERM 143 183141 - 183153 + g 78 -3.3 -5.0538 | AGCATGCACAGATCC TGCGC GGC GAGCA TTTTTTGAACTGCAA Pnap_4607 184906 - 184487 - | hypothetical protein TERM 144 184684 - 184668 - G 74 -2.2 -4.87786 | gap 1, opp_overlap 184678, overlap 184657 184682 CCAAGGCCAGAAAAA GCG-GCC GGCA GACACGC GGCACATCTGCGACT TERM 145 185260 - 185272 + r 70 -6.9 -4.17296 | opp_overlap 185259, overlap 185256 CCTCATCAAGTCAAC GCGCT CAA GGCGC TTTGTGTATATCAGG Pnap_4608 186455 - 185415 - | transposase IS116/IS110/IS902 family protein TERM 146 185787 - 185817 + g 75 -3.8 -4.7373 | overlap 185789 CAGCGCACTGGCCGT GATCGGGCCGATGC CCG GGATCTGCGCGAGC TTTTTGCTCGCCTCG TERM 147 186722 - 186735 + H 77 -3.7 -5.07486 | TGAGCGTGGGAGTCT GCCAG GGCA CGGGC TTTTTGTTCAGAATG TERM 148 186961 - 186943 - H 79 -3.1 -5.19212 | AGGACCAGGAAAAAA GCTCAAT TTCCC ACCGAGC GCGGTACCAATCGAC TERM 149 187446 - 187456 + H 74 -8.2 -3.9392 | opp_overlap 187437 187435 AGCACACCGCCGCGC GGCG CAT CGCC TTGTTTGAACTCGCG TERM 150 187772 - 187784 + H 70 -6.9 -4.07568 | GCATGCCCCCGGAAT GCTCG CGC CGGGC TTTTGCCCCAGCCGC TERM 151 188839 - 188853 + H 71 -4.2 -4.59773 | opp_overlap 188839 188850, overlap 188840 CTCCTGCCCCATGAA CCGGAT CAA ATCCGA TTTTTCAGGATCGCC Pnap_4610 188932 - 189345 + | hypothetical protein SEQUENCE gi|121583183|ref|NC_008759.1| Polaromonas naphthalenivorans CJ2 plasmid pPNAP03, complete sequence (length 171866) Pnap_4813 1071 - 508 - | hypothetical protein Pnap_4814 2318 - 1068 - | hypothetical protein Pnap_4815 2984 - 2427 - | hypothetical protein Pnap_4816 4129 - 3338 - | methionine aminopeptidase, type I Pnap_4817 4383 - 4129 - | hypothetical protein Pnap_4818 5320 - 4526 - | hypothetical protein TERM 1 5543 - 5566 + G 72 -4.4 -4.66609 | gap 1, overlap 5562 CCGCCTTGCAAGGGT CGCCACG-GCG GGG CGCACAGGGCG TTTTTCGATGCCCTG Pnap_4819 5435 - 5764 + | transposase (putative) Pnap_4820 5883 - 6194 + | hypothetical protein TERM 2 6256 - 6226 - g 71 -5.3 -4.4009 | gap 1, overlap 6228 CTGCATTGGAGAAAA TC-GCAGGCTCGGC CCAG GCCGCGCGCGCTGA AGGGCAGCGACAGGA Pnap_4821 6216 - 6782 + | hypothetical protein Pnap_4822 7040 - 7771 + | hypothetical protein Pnap_4823 7768 - 8064 + | hypothetical protein TERM 3 8066 - 8092 + F 83 -5.7 -4.87665 | overlap 8069 ATACCAGGCATTGAT TCGGCGGGCTC CCAGT GAGCCCGCTTC TTTTTGTGCCTAGCC TERM 4 8069 - 8089 + F 100 -14 -4.5448 | overlap 8066 CCAGGCATTGATTCG GCGGGCTC CCAGT GAGCCCGC TTCTTTTTGTGCCTA Pnap_4824 8080 - 8490 + | hypothetical protein Pnap_4825 9788 - 8463 - | hypothetical protein TERM 5 8630 - 8643 + g 81 -3.7 -5.07486 | TGAGCGTGGGCGTCT GCCGG GGCA CGGGC TTTTTGTTCAGGATA TERM 6 10145 - 10176 + r 72 -11.6 -3.06492 | gap 1 TCACCGGCATCCCGG GCTTACCGGACTTGC GCT GCAGG-CCGGTCAGC TCTTGGCATCAATCC Pnap_4826 11291 - 10686 - | hypothetical protein TERM 7 11567 - 11548 - g 80 -5.6 -4.7254 | opp_overlap 11552 AGCCTGGATTAAAAA GGGGGCTG AGGG CAACACCC ACGGCTTTGCAAGGC TERM 8 11693 - 11680 - g 77 -3.7 -4.84761 | ATATGTCGACAAAAA CCTGC TCAT GCCGG CGCGCCTTGCGGCGG Pnap_4827 11519 - 12142 + | hypothetical protein Pnap_4828 12347 - 13003 + | hypothetical protein TERM 9 13035 - 13052 + F 100 -12.7 -5.60993 | opp_overlap 13035 TGATTGATTTGAAAA GCGGACC CAAG GGTCCGC TTTTTTTGTCCGCCG TERM 10 13052 - 13035 - f 95 -12.7 -4.14739 | opp_overlap 13035 TGATTGATTTGAAAA GCGGACC CAAG GGTCCGC TTTTTTTGTCCGCCG Pnap_4829 13077 - 13469 + | hypothetical protein Pnap_4830 13466 - 14689 + | hypothetical protein TERM 11 14763 - 14726 - T 90 -17.2 -2.52464 | gap 2, opp_overlap 14712 TGGGTTGTGAAGCGA CTCA-CGTC-CCACCCCC TTTA GGGGGTGGAGACGATGAG ACGCTTACAACCCAT Pnap_4831 16102 - 15293 - | silent information regulator protein Sir2 TERM 12 16455 - 16436 - R 74 -7.1 -4.25104 | overlap 16437 CTGCGTTCACGAAAA CCGGCAG CAGTAC CTGCCGA ACCATTTTGCGTCCT Pnap_4832 17220 - 16723 - | hypothetical protein TERM 13 17126 - 17165 + g 72 -4.3 -4.56597 | gap 1, overlap 17132 17133 TGCGGCTGATGCGCA TGGATG-TCGTCAGCGAG CAGTT CGCGTTGACGGTTGTCCA TTTTTCCAACGGCGG TERM 14 17284 - 17254 - H 86 -7.4 -4.74504 | overlap 17255 AGCGCAACGTAAAAA GGCAGCCGCTCTCG CAG CAAGCACGGCCGCA CTGAGTGAAGACCAG TERM 15 17283 - 17255 - H 73 -10.9 -3.4398 | overlap 17254 GCGCAACGTAAAAAG GCAGCCGCTCTCG CAG CAAGCACGGCCGC ACTGAGTGAAGACCA Pnap_4833 18125 - 18871 + | hypothetical protein Pnap_4834 18868 - 19368 + | hypothetical protein Pnap_4835 19365 - 19685 + | hypothetical protein Pnap_4836 19682 - 19996 + | hypothetical protein Pnap_4837 20058 - 20303 + | hypothetical protein Pnap_4838 20392 - 20631 + | hypothetical protein Pnap_4839 20846 - 20637 - | hypothetical protein Pnap_4840 20886 - 21182 + | putative DNA-binding protein Pnap_4841 21179 - 21535 + | hypothetical protein Pnap_4842 23065 - 21728 - | hypothetical protein TERM 16 21870 - 21857 - G 74 -5.2 -4.56597 | TTTTCGCCCCAAAAA CCCG CCTCGC CGGG CAATCAGCCGGATGA Pnap_4843 23547 - 23921 + | hypothetical protein TERM 17 24651 - 24662 + G 72 -4.4 -4.56597 | ATGCGGTCGATACGT CCAA AGAA TTGG TTTTTGAGAACAAGG Pnap_4844 23918 - 24709 + | metallophosphoesterase Pnap_4845 24757 - 25020 + | hypothetical protein Pnap_4846 25342 - 25037 - | acylphosphatase Pnap_4847 25421 - 25666 + | hypothetical protein TERM 18 25869 - 25885 + F 70 -5.1 -4.4009 | AACGATTGCGCACCA GGCTG ATTGCTC CAGCC TTTTGTACGATACCC TERM 19 26102 - 26114 + F 72 -2.6 -4.87133 | overlap 26098 26097 AAATGCTTGATGAAT GCGG TGCTT TCGC TTTTCTTTGAAAAGT TERM 20 26947 - 26937 - g 72 -2.4 -4.72986 | CACGTTGATTAAAAA GGGG GAC CCGC GCGCGCTGGCAGTGG Pnap_4848 26218 - 27315 + | DNA alkylation repair enzyme-like protein Pnap_4849 27545 - 28195 + | XRE family transcriptional regulator Pnap_4850 28791 - 28519 - | hypothetical protein Pnap_4851 29233 - 28880 - | MazG nucleotide pyrophosphohydrolase TERM 21 29515 - 29532 + G 72 -4.1 -4.66833 | gap 1, overlap 29494 GGCGTTGCGGGCTAC GCCGT-CG GTG TGTACGGC TTTTTGCCCTTGGGG Pnap_4852 29356 - 30111 + | hypothetical protein Pnap_4853 30119 - 30565 + | signal peptide prediction TERM 22 30885 - 30917 + T 74 -9.7 -3.65902 | opp_overlap 30880 30871 ACGCGGCAAATCACG CCCTCCCCACAGACC CGT GGGCTATGGGGGTGG TTTGCCTCGACTCAA Pnap_4854 32399 - 31290 - | hypothetical protein TERM 23 31405 - 31380 - G 73 -3.3 -4.72272 | gap 1, opp_overlap 31381, overlap 31381 31382 31384 CGTGTTCACGAAAAA CGCATCGAACAG GCG CTGCTTGATG-G ACGCCTGCAGCGCGG TERM 24 31836 - 31818 - G 78 -6.6 -4.56597 | overlap 31821 GGCGCCGCCGAAAAA CATGCTGC CAG GCAGCTCG TACTGGCCGCCGGAA Pnap_4855 32558 - 33916 + | hypothetical protein TERM 25 33987 - 33971 - T 71 -8 -3.89346 | TGGTTACGGTATAAA GATGGG AATGA CCCATC AAGTACGCCCCTCGA Pnap_4856 34507 - 34250 - | hypothetical protein TERM 26 34372 - 34352 - G 76 -9.7 -4.05788 | opp_overlap 34365 CGCGCCGAAAGCAAA CTGCGCC TCATCAC GGCGCAG CCCTTCGCTGAGGTA TERM 27 34841 - 34861 + H 95 -5.5 -5.40474 | opp_overlap 34841 GTGGATTTTAGGTAA TGTATTGAC TTT GTAAATACA TTTTTTTGGGCAAGT TERM 28 35229 - 35241 + H 80 -5.5 -4.85599 | overlap 35212 CATCAGAGCCTTCGC GGTTC AGA GGACC TTTTTCTGCCGTAGA Pnap_4858 35461 - 36123 + | hypothetical protein Pnap_4859 36413 - 37345 + | cation diffusion facilitator family transporter TERM 29 37382 - 37396 + T 74 -10 -3.71527 | opp_overlap 37379 37382 TCGGCGATTCAAGCA TCAGCC CTC GGCTGA TTTGCGTAATTCGAG Pnap_4860 38112 - 37426 - | hypothetical protein TERM 30 38163 - 38179 + G 71 -5.8 -4.33165 | overlap 38166 38178 GGCCTTGTCGCTATA CGTGGA AATCA TCCGCG TTTTCCTGGGTTTCC Pnap_4861 38152 - 38619 + | hypothetical protein TERM 31 38712 - 38726 + F 71 -4.2 -4.58663 | opp_overlap 38712 38711, overlap 38711 TTATTATTAGATAAT TGCTGC ACT GCAACA TTTTTGAAAGGTCAT Pnap_4862 38745 - 39215 + | hypothetical protein TERM 32 39305 - 39322 + T 100 -9.8 -5.8187 | CTTTCAAATGATGGA CCCGGC CGCTGT GCCGGG TTTTTTTATTGGGTG Pnap_4863 39924 - 39451 - | hypothetical protein TERM 33 39671 - 39684 + g 76 -8.1 -4.24285 | TTGGCTGCGGTATCA GCAGC GTCG GCTGC TTTCTTGGCTCTATC TERM 34 39999 - 39989 - R 75 -4 -4.84359 | TGACCTTTATAAAAA TCAA GAT TTGA GCTGCTTTTGTGAGA TERM 35 40099 - 40073 - R 71 -5.8 -4.27192 | opp_overlap 40080 40081, overlap 40074 40079 40081 40087 AAAGTCCTATTAAAA CCGAAACACGAG AAT CTCGATTTTCGA GAATCCCGAACGCTG TERM 36 40107 - 40081 - R 77 -11.6 -3.55481 | opp_overlap 40081 40080, overlap 40074 40073 40079 40087 ATTAAAACCGAAACA CGAGAATCTCGA TTT TCGAGAATCCCG AACGCTGAAGAAGTC TERM 37 40128 - 40157 + r 76 -2.8 -5.00234 | overlap 40129 40132 TGAAGAAGTCGACTT TCGTGGGCTAGG AACTGC CTTAGCTCGTGG TTTATTTGTTTTTTG Pnap_4864 40531 - 40277 - | hypothetical protein TERM 38 40567 - 40597 + H 80 -8.9 -4.12188 | GAACCCTTTCAGGTA CCGGGCTACCGGT AGGTC GCTGCTGGCCCGG TTTTGCAGATGCTCG TERM 39 40996 - 41015 + H 74 -10.8 -3.53224 | opp_overlap 40988 TTAACGATGCTTCCA CGATGCAT AGCC ATGCATCG TTTAAAGGGGAGGTC Pnap_4865 41313 - 41759 + | hypothetical protein TERM 40 42259 - 42282 + G 76 -7.3 -4.27617 | AACCGTCATCTTCCT CGCTGCTGG CTTCAT CCTGCGGCG TTTTCCTGCCATCTG Pnap_4866 42101 - 42526 + | hypothetical protein Pnap_4867 42622 - 43443 + | helix-turn-helix domain-containing protein Pnap_4868 44705 - 43431 - | di-haem cytochrome c peroxidase TERM 41 44283 - 44304 + g 75 -14.5 -2.71364 | overlap 44285 GTCTTCGAGTGGCCC CAGTGCCTG CGAC CAGGCACTG TCCTTGCGCCCGTCC Pnap_4869 45538 - 44702 - | hypothetical protein TERM 42 45142 - 45156 + g 75 -4.2 -4.67982 | overlap 45143 CTGCCGCTGCGGTGA GCATGC GAA GCATGA TTTTCTTGGGTGCCG TERM 43 45608 - 45625 + H 89 -9.1 -4.65916 | opp_overlap 45608 45607, overlap 45587 GGGGCTTGAACGAAG GGGCTGT TTTG GCAGCCC TTTTGTTCAAGTCGA TERM 44 45771 - 45759 - H 71 -10.5 -3.18264 | opp_overlap 45767 GGTGCGACCTACTAA GGCGC CAA GCGCC CGGCTGCTTATTAAA TERM 45 45837 - 45853 + H 84 -3 -5.40474 | gap 1, overlap 45819 CCAACTGCAGCGTTG GAC-GTC ATTC GACAGTC TTTTTTTAAAAAGGT TERM 46 46293 - 46306 + G 95 -3.1 -5.75945 | CATTGGTGCGGCGGT TGGTG CCCT TACCA TTTTTTTTGCGCGAT Pnap_4870 46264 - 46680 + | hypothetical protein Pnap_4871 48015 - 46954 - | HNH nuclease TERM 47 47084 - 47141 + g 74 -9 -3.9122 | gap 1 AGGCTGACCTGCGCA TCGGCCAGCATGCCCGCCGCCATTCCG ACTTC CTTGATGGCGTCA-GCGTGCCGGCCGA TTCTTTCCAGCCATC TERM 48 47728 - 47701 - G 73 -11.2 -3.57263 | opp_overlap 47724 ATGCCGAGTCCGAAA GGTCGCGATGGC CGAT ACCACCGCGGCC TGCACGCCGTTGTTC Pnap_4872 48421 - 48020 - | histidine triad (HIT) protein Pnap_4873 49258 - 48530 - | hypothetical protein TERM 49 49092 - 49072 - G 76 -6.1 -4.62069 | TTTGCACTCCAAAAA TGACGCTGG CTG CGAGCATCA GGGTGGAAAACTGCT Pnap_4874 50232 - 49378 - | hypothetical protein Pnap_4875 50852 - 50424 - | hypothetical protein TERM 50 51982 - 51967 - g 78 -3.2 -5.07652 | opp_overlap 51968, overlap 51968 GGTGGGAAAATAAAA GTCGAG CGGT CTCGAT ATTTGGTCTACGAAC Pnap_4876 51097 - 52152 + | hypothetical protein TERM 51 52468 - 52441 - T 78 -5.9 -4.77759 | opp_overlap 52441 ATAATGCATTAAAAA TATTATTAAAT AATAAA ATTTAATAATA TTTAGTTCTTAAAAA Pnap_4877 53179 - 52493 - | hypothetical protein TERM 52 53345 - 53398 + H 75 -5.8 -4.59853 | gap 3, opp_overlap 53358 53376 53377, overlap 53351 53352 TAGCCTTGCGTACGT C-AT-CATGT-GCAAAGATTTGCTTAA AAA TTAAGCAAATCTTTGCGATTTGGATAG TTTTTAGGCACTTAC TERM 53 53351 - 53389 + H 100 -15.6 -3.78018 | opp_overlap 53358 53376 53377, overlap 53345 53352 TGCGTACGTCATCAT GTGCAAAGATTTGCTTAA AAA TTAAGCAAATCTTTGCGA TTTGGATAGTTTTTA TERM 54 53352 - 53388 + H 100 -19.1 -2.85726 | opp_overlap 53358 53376 53377, overlap 53351 53345 GCGTACGTCATCATG TGCAAAGATTTGCTTAA AAA TTAAGCAAATCTTTGCG ATTTGGATAGTTTTT TERM 55 53382 - 53358 - H 85 -13.1 -3.58343 | opp_overlap 53352 53351 53345, overlap 53376 53377 GTCATCATGTGCAAA GATTTGCTTAA AAA TTAAGCAAATC TTTGCGATTTGGATA TERM 56 55717 - 55706 - g 70 -7.2 -4.05788 | overlap 55707 TCGTGCGAAACCAAA GCGG CAAG CCGC TAACCAGGGCCTTGC xseA 54079 - 55809 + | exodeoxyribonuclease VII large subunit TERM 57 55874 - 55841 - g 95 -16.1 -3.9243 | gap 1, overlap 55861 55864 GAATCGTTTAAAGAA GCGTATGGG-GTGCTG CAA CAGCACGCCCAGACGC TGCGCAACCAGCGCG TERM 58 56044 - 55990 - g 100 -20.9 -4.10855 | AAAAGCGCTTGAAAA GGCCTTGAGCGACACGCAGGC-GCCAC CCA GCAGCAGCCTGCCTG-CGCTCAAGACC CCGGCGCCTGCAGCC Pnap_4879 55817 - 56092 + | hypothetical protein Pnap_4880 56549 - 56142 - | hypothetical protein Pnap_4881 57206 - 56811 - | TfoX domain-containing protein Pnap_4882 57338 - 57604 + | hypothetical protein TERM 59 57885 - 57869 - g 72 -2.1 -4.7629 | opp_overlap 57872 57875 57882 57884, overlap 57870 GGATGAACTGAAAAA TCTCGAG TCC CTCGGGC TGGTCTTGCCCAGTC Pnap_4883 57852 - 58097 + | hypothetical protein Pnap_4884 58609 - 59103 + | hypothetical protein TERM 60 59341 - 59366 + G 74 -9.8 -3.76789 | opp_overlap 59345, overlap 59334 59338 TTTCCGACATCCAGA TGAACTGGAC TGACTT GTCCGGTTCA TTCATTTTGTCCCTT Pnap_4885 59235 - 59714 + | hypothetical protein Pnap_4886 60019 - 60363 + | histone family protein nucleoid-structuring protein H-NS TERM 61 60829 - 60807 - T 76 -12.8 -2.82834 | CAGCGCACCAGGACA TTGATGCCCA GTG CGGGCATCAA GCCGAGCCCATGCTC Pnap_4887 61050 - 60826 - | AbrB family transcriptional regulator Pnap_4888 61259 - 61846 + | hypothetical protein TERM 62 61908 - 61898 - g 81 -2.4 -5.17576 | TACCAAGGCAAAAAA CGGG GGT CCGG TGCTCGGTTACGAGC Pnap_4889 61865 - 62161 + | hypothetical protein TERM 63 62233 - 62258 + T 80 -10.7 -3.80573 | opp_overlap 62233 62232 CACCATCACCGAAAT TGGAATTTAAA GCGC TTTAAATTCCA TTTCCTAATACTGCC Pnap_4890 62722 - 62249 - | XRE family transcriptional regulator Pnap_4891 64600 - 62792 - | hypothetical protein TERM 64 63136 - 63113 - G 78 -6.7 -4.57073 | opp_overlap 63115 CATTGCCGTCAAAAA TATGGCTCG TTTGCC CGCGCCATA GCTTAAACGTGCTCT Pnap_4892 65088 - 64585 - | hypothetical protein Pnap_4893 66152 - 65085 - | hypothetical protein Pnap_4894 66377 - 67198 + | hypothetical protein TERM 65 67373 - 67424 + GF 100 -16.5 -3.53224 | opp_overlap 67335 CTTTACCGCCTGGGC GCCGACCAGCC-TGGCGGCGCTGGC GCTG GCCCGCGCCGGCGTGGCTGA-CGGC TTTGCCAGGCCGCTG TERM 66 67524 - 67571 + GF 95 -14.1 -3.53224 | gap 1, overlap 67525 CGCCTGGGCTGCCGC ACGCTGGCCGATGT-GCGCCGG CTGCC CCGGGGCGGCATTGGCCGGCGC TTTGACGCCGCGCTG TERM 67 67525 - 67570 + GF 91 -17.6 -2.71791 | gap 1, overlap 67524 GCCTGGGCTGCCGCA CGCTGGCCGATGT-GCGCCGG CTGCC CCGGGGCGGCATTGGCCGGCG CTTTGACGCCGCGCT TERM 68 68088 - 68068 - gf 77 -8.1 -4.07568 | opp_overlap 68086 CGCGCCTGGGCAAAA GGCGGGTGC TGC GCCCTCGCC TGGTGGCCGACCACC Pnap_4895 67137 - 68468 + | hypothetical protein TERM 69 68691 - 68714 + G 72 -2.4 -4.72272 | gap 1, overlap 68694 GCCAGGGAGGCCGGG CT-CGCGCT GCTGGTG GGCGCGCAG TTTTTAGTAGCGGAC TERM 70 69838 - 69822 - g 74 -12.3 -3.53224 | GACCTGCTCGCCAAA TCCCACC AGT GGTGGGA CGGCGGCCAGGTCGA TERM 71 69855 - 69878 + G 91 -15.3 -3.90744 | GGCGGCCAGGTCGAT GCCGAGCGC CTGACC GCGCTCGGC TTGTTTCCGGACGAC TERM 72 70280 - 70298 + G 73 -8.1 -4.10161 | opp_overlap 70254, overlap 70255 GCAGGGCATGCTGCC GCGCCTG CAGCC CAGGTGC TTTTACGACCTGGTC TERM 73 70730 - 70747 + G 71 -9.1 -3.76402 | gap 1 CAGCGCCTGGCTCAA GCGCGCCG AGC CGGC-CGC TTTCCTGGCTGCGCT Pnap_4896 68478 - 71603 + | DNA polymerase III, alpha subunit Pnap_4897 73236 - 72067 - | hypothetical protein TERM 74 72399 - 72417 + g 71 -5.8 -4.2693 | opp_overlap 72392 CGCAGCAATGCGTGG CGCCGGGC AAT GCCGGCCG TTCTTTTGATGCCTT TERM 75 73572 - 73551 - H 71 -4.4 -4.56597 | overlap 73553 TCCGTCGCTTAAAAA TGCTTGGC ACAAAG GCCAAGTA ACCGATTCCAACCAG Pnap_4898 73646 - 74188 + | DNA-directed DNA polymerase TERM 76 74218 - 74236 + F 88 -11 -4.20516 | overlap 74219 ATGAATCGTCGAAGT TGGCCAAG GCC CTTGGCCG TTTATTGCGTCCAGG TERM 77 74219 - 74235 + F 76 -12.3 -3.11988 | overlap 74218 TGAATCGTCGAAGTT GGCCAAG GCC CTTGGCC GTTTATTGCGTCCAG TERM 78 74829 - 74803 - g 78 -5.1 -4.72986 | overlap 74804 CAGGCCCATCAAAAA CGCACCGACAA CTTCT TTGCCGATGCC CGTCTGCGCCAGGCC TERM 79 75112 - 75098 - g 72 -4.2 -4.63527 | overlap 75100 CCAGCATCGCAAAAA GCCCAA GCA TTGGTC CAGGCAAGGTGCGCG Pnap_4899 74383 - 75180 + | DNA/RNA non-specific endonuclease TERM 80 75720 - 75732 + T 77 -7.7 -4.30416 | TGACTTTTTTAGTAC CCTAC GCT GTAGG TTTTGCGTTGGTACT TERM 81 76321 - 76338 + T 80 -5.5 -4.9725 | overlap 76324 TCACCTTGAAGAGCC GAAGGGT TACG ACCCTGC TTTTTGTATGAACAT TERM 82 76735 - 76767 + T 85 -11.2 -3.99405 | overlap 76748 ACAAGTTGTCTCCCT GCAGCGCGACCTCT GTTAG AGAGGCCGTGCCGC TTTGTCATGCATTAC Pnap_4900 78175 - 76772 - | hypothetical protein TERM 83 78099 - 78117 + g 81 -13.2 -3.76402 | TCTGCCAGTTTGCGG TGGACGAG GCG CTCGTCCA TTTCGTCAGTGACGT Pnap_4901 78211 - 78651 + | hypothetical protein Pnap_4902 79379 - 78798 - | hypothetical protein TERM 84 79150 - 79120 - G 73 -6.6 -4.28049 | overlap 79112 CTTAAAACCGCAAAA GGCAGCGGGTCGAG CAG CTGGGCCAGCGGCC GGGCAAATCCGTCGG Pnap_4903 79630 - 79379 - | hypothetical protein Pnap_4904 80123 - 79641 - | hypothetical protein TERM 85 79831 - 79811 - G 71 -4.7 -4.43844 | gap 1, overlap 79813 CCACGATTGACAAAA TG-CCGGG TGGAAG CCCGGTCA CAAATGACAAAACCT TERM 86 81143 - 81129 - g 91 -2.8 -5.40072 | GTTCTGGTAAAAAAA CGCT TGGTCGT AGCG ATAGGTGACTCCTTC TERM 87 81518 - 81537 + G 74 -9.3 -3.96148 | AAAATTCTCCCAGCA GGAAGCG CTAGCC CGCTTCC TTTGTCCTACAAACC TERM 88 81948 - 81923 - g 83 -5.3 -4.96773 | GCAAGGAAAAACAAA GGTCCGGATGC TGCA GTACCCCGACC CGGCGTCGAACGACC Pnap_4905 80664 - 82586 + | hypothetical protein Pnap_4906 84841 - 82892 - | pathogenesis-related protein TERM 89 84271 - 84281 + g 83 -6.8 -4.83169 | opp_overlap 84264 GGAGCCAAGCCGCCG CGTC GAG GACG TTTTTATGCGCAAGT Pnap_4907 87147 - 84838 - | hypothetical protein TERM 90 85394 - 85405 + g 80 -5.8 -4.67982 | overlap 85392 TCTCCATTCTTCTTT GGCT TGCC AGCC TTTTCTTCGGTAGGG Pnap_4908 87667 - 87915 + | hypothetical protein Pnap_4909 88877 - 88038 - | hypothetical protein Pnap_4910 89447 - 91201 + | N-6 DNA methylase TERM 91 92322 - 92304 - g 85 -5.8 -5.00884 | overlap 92306 ACTCGGCGCAAAAAA CGGCGGCG CGA CCCTGCCG GCTGGCAGCACCGGG TERM 92 94020 - 94009 - g 81 -2.2 -5.18357 | GAAGCCATCAAAAAA CCTC ACTC AAGG GAACTAAATGCCTGA Pnap_4911 91204 - 94035 + | hypothetical protein TERM 93 94162 - 94192 + G 73 -3 -4.76041 | overlap 94127 94163 94165 94180 CAGCATCCTTTTCGG GGCCCGGCCTCGCG CTT TGCTGAGCTCGGCC TTTTTACTGCCTGTG TERM 94 95639 - 95629 - g 71 -8.2 -3.84271 | opp_overlap 95636 GGACAAGACCAAGAA GCGG GGG CCGC AGTCGAGCGACAAGG TERM 95 95953 - 95938 - g 72 -3.9 -4.59773 | overlap 95941 CTTGAGGGGGAAAAA GACGG GCGTGA CCGCC ATGCTGCGCTATCCG TERM 96 96552 - 96583 + G 73 -10.8 -3.56643 | gap 1, overlap 96554 CCAAGGAATTCGCAG GAGGCCC-CGCAGCC CAC GGATGCGAGGGCCTG TTTCCCGCCTATCCC TERM 97 96554 - 96581 + G 77 -13.4 -3.36073 | gap 1, overlap 96552 AAGGAATTCGCAGGA GGCCC-CGCAGCC CAC GGATGCGAGGGCC TGTTTCCCGCCTATC TERM 98 97286 - 97276 - g 81 -2.4 -5.1356 | CGTCACCAACAAAAA GGGC GGT GACC AAATCATGGCGGCTG Pnap_4912 94028 - 98260 + | helicase domain-containing protein TERM 99 99419 - 99404 - g 83 -4.6 -5.02074 | GGATGCTGGAAAAAA GCCTGG AGGA CAAGGC TCAGGACTGGCGAAA Pnap_4913 98257 - 100521 + | hypothetical protein Pnap_4914 100508 - 101356 + | hypothetical protein Pnap_4915 101403 - 101609 + | hypothetical protein TERM 100 103138 - 103086 - g 72 -4 -4.64861 | gap 1, overlap 103087 GTCTTTGAAAACAAA TTCTTCGGCTACCGCAAGGTGACGG TGGA CCGCCCCCTGGCAGAAGGC-AAGAC TGGCAAATTCAAAAA Pnap_4916 101619 - 103442 + | N-6 DNA methylase Pnap_4917 103439 - 104677 + | restriction modification system DNA specificity subunit Pnap_4918 106113 - 104824 - | HipA domain-containing protein TERM 101 105132 - 105145 + g 71 -8.1 -3.85864 | opp_overlap 105116 105115, overlap 105133 105134 CGCGGTCAGCACCTG CCACG ACAC CGTGG TTCTTATCATGGTCG TERM 102 105353 - 105313 - G 95 -19.7 -3.34043 | overlap 105317 CGGATTACTCCAGAA GATACTCCGCGCGCTGGCG TAA CGCCAGCGCCCGAAGCCTC CCCCGCTCAACGGGC TERM 103 105349 - 105317 - G 100 -21.3 -3.18118 | overlap 105313 TTACTCCAGAAGATA CTCCGCGCGCTGGCG TAA CGCCAGCGCCCGAAG CCTCCCCCGCTCAAC TERM 104 105875 - 105859 - G 75 -3.6 -4.91977 | GAGTAAAACAGAAAA CCACCC GTCTA GGGCAG CTGTTTCATACCGCT Pnap_4919 106646 - 106951 + | hypothetical protein TERM 105 107053 - 107035 - T 73 -10.3 -3.3197 | ACATCACCCCTACAA GGCTTCG TTCGG CGAAGCC GGCAACGGCAAAAGT Pnap_4920 108429 - 107029 - | hypothetical protein Pnap_4921 108871 - 110001 + | hypothetical protein TERM 106 110705 - 110692 - g 74 -2.3 -4.88067 | overlap 110693 ACCGACCCACAAAAA CCCGG CGCA CCGAA CTCGGAAAAGCTGGG Pnap_4922 110194 - 110793 + | hypothetical protein Pnap_4923 110826 - 111443 + | hypothetical protein TERM 107 111437 - 111421 - f 80 -9.4 -4.13654 | opp_overlap 111420 CCCGTAAAGCAGAAA CGCTCC GAAAG GGAGCG CTCTAGTGATAAAAA TERM 108 113282 - 113311 + G 78 -12.2 -3.73107 | gap 2, overlap 113305 CTTGAGCTGTTCGGC CGGC-CGGGCA-CC GACG GGCTGCCCGTGCCG TTTCACGTTTACTCG Pnap_4924 111722 - 114829 + | hypothetical protein TERM 109 114974 - 114990 + G 81 -10.1 -4.19258 | TGACCTGGGTCGGCA GCAGCGG AAT CTGCTGC TTTTACGTCCCCTCT TERM 110 115483 - 115462 - g 84 -4.3 -5.10497 | overlap 115463 AACTGATGGAAAAAA TGCTGGACC TTCT GGTCAAGCG GGGACGCTTCGAGGC TERM 111 115673 - 115626 - g 83 -9 -4.27617 | gap 1, opp_overlap 115627, overlap 115630 GACATGGCAGGAAAA CTGA-CCGCAGCCCGTGGCCATG TTG CAGGGCGCCAGGCTGAGGACCAG CGGATGGAAGAGGCC Pnap_4925 114936 - 116378 + | hypothetical protein TERM 112 116677 - 116657 - g 78 -10.3 -3.96892 | AAGGCGGACCAGAAA GCGGGCCTG CTC CTGGCCCAC ATTGCCATCACCGCG Pnap_4926 116375 - 117106 + | hypothetical protein TERM 113 118413 - 118398 - g 75 -3.2 -4.82667 | overlap 118391 118407 GCAGGAGAGCAAAAA CTGCAA AAAG CCGCAG CGGGAGAAGCCTCGC TERM 114 118417 - 118407 - g 72 -2.4 -4.7657 | overlap 118398 CAAAAACTGCAAAAA GCCG CAG CGGG AGAAGCCTCGCTAGA TERM 115 118752 - 118727 - g 83 -4.7 -5.10154 | gap 1 AGCCAAAAGCAAAAA TGAGACA-GCAG AAG CCGCACGCCTCA AAGCGGAAATTGGGC TERM 116 119572 - 119562 - g 93 -8.2 -5.06414 | GCCTCCCAAGAAAAA GCGG AGG CCGC AAGAAAGGAGGCAGA TERM 117 119982 - 119944 - g 71 -5.9 -4.38712 | gap 1, overlap 119945 119948 GCGACGCGGAGAAAA CCTACGACGCCGAGGCCG AGAC CCGCCTGGGCATCGT-GC ATGAAAAGCAAGACT TERM 118 120238 - 120217 - g 73 -2.9 -4.68103 | overlap 120218 TCAAGGCCAACAAAA CCAACTCTG CCGC CAGTGCTGA GATGCTGGCGCTGAA TERM 119 121185 - 121172 - g 71 -9.5 -3.68222 | GGCCAAGCTCAAGAA GGCCG GTGG CGGCC CGCTCATCCTGGACA Pnap_4927 117108 - 121433 + | hypothetical protein TERM 120 121975 - 121985 + G 71 -8.2 -3.84406 | CAAAGCTGATGCTCC CGGG ATG CCCG TTCTTGTGGTGGAGA TERM 121 122049 - 122082 + G 89 -13.1 -4.12188 | opp_overlap 122048 122049 ATCAGGCCGCCAAAC GCTACTCCGCAGTGG TCTA CGGCTGCGGAGAAGC TTTTCGCAGTACTGG Pnap_4928 121430 - 122431 + | hypothetical protein TERM 122 122632 - 122656 + T 79 -11.3 -3.62046 | opp_overlap 122634, overlap 122639 GCAGCCCCGCTCAAT CAGGCCCGCGT TGT ACTCGGGCCAG TTCTTGACCCGGTAG TERM 123 122654 - 122634 - T 76 -12.5 -2.71011 | opp_overlap 122632 122639 AGCCCCGCTCAATCA GGCCCGCGT TGT ACTCGGGCC AGTTCTTGACCCGGT TERM 124 122755 - 122725 - T 74 -9.7 -3.72893 | gap 1, opp_overlap 122742 CATGTTCGGAGCAAA GGCC-GGTAGCCTG CCAG CAGGCCAGCAGGCC AGCATGCCAGCATGC Pnap_4930 123273 - 122911 - | hypothetical protein TERM 125 123194 - 123184 - G 74 -2.4 -4.90778 | GTCATTGAAATAAAA GCGC TGT GCTC TGGCATTATTTGTCC TERM 126 124232 - 124242 + H 78 -2.6 -5.22006 | overlap 124236 TCGATGTAATGTAGC TTTT CAA AAAA TTTTTGTTGTGCTGG TERM 127 124977 - 124993 + H 74 -2.2 -5.055 | overlap 124979 CGTAAAATCCGTACT GCCTGT AGGCA ACAGAC TTTTTTCAGACTTGG TERM 128 125294 - 125277 - g 78 -7 -4.56597 | opp_overlap 125259 GCGCTGGTGCAAAAA GTGCAG CTTTGC CTGCAC GCCAAAACGGGGCAG Pnap_4931 125023 - 125409 + | hypothetical protein TERM 129 125876 - 125898 + F 95 -8.5 -4.95484 | gap 1, opp_overlap 125875 CCTGCCCGATGTAAC GCAGCCG-TA CATT TAGCGGCTGC TTTTCTTTGGTGATA TERM 130 126155 - 126167 + F 90 -4.7 -5.40072 | opp_overlap 126156, overlap 126156 CGCAGGAGGAGGAAA AGCCG GCC CGGCG TTTTTTTGCCACAGC TERM 131 126156 - 126166 + F 71 -8.2 -3.83561 | opp_overlap 126156, overlap 126155 GCAGGAGGAGGAAAA GCCG GCC CGGC GTTTTTTTGCCACAG TERM 132 126166 - 126156 - f 81 -8.2 -4.32034 | opp_overlap 126156 126155 GCAGGAGGAGGAAAA GCCG GCC CGGC GTTTTTTTGCCACAG TERM 133 126965 - 126990 + G 76 -12.5 -3.40403 | GCTGGAGCGCTGGCT GGCGGTCCAGC CCAC GCTGGGCGGCC TTGTAATGCCCGCCG TERM 134 127641 - 127695 + G 73 -12.7 -3.17051 | gap 2, overlap 127640 127642 GCGACGCTGCAGGCG GGGCCGCGCGCCGCGGGCATGGCGCTG GCG CAGTGGC--GCCTGGCGCGCGCGGCCA TCTTGCTGCTGGGCA TERM 135 127642 - 127694 + G 79 -16.2 -2.50016 | gap 2, overlap 127641 127640 CGACGCTGCAGGCGG GGCCGCGCGCCGCGGGCATGGCGCTG GCG CAGTGGC--GCCTGGCGCGCGCGGCC ATCTTGCTGCTGGGC TERM 136 128105 - 128133 + G 84 -16.7 -3.01712 | overlap 128107 GGCACTCAGCCCGCA CGCTGCGCTCAGC CAG GCCGAGCGCAGTG TCTTGAGCCGCGCCG TERM 137 128107 - 128131 + G 81 -15.7 -3.06696 | overlap 128105 CACTCAGCCCGCACG CTGCGCTCAGC CAG GCCGAGCGCAG TGTCTTGAGCCGCGC Pnap_4932 126462 - 128318 + | phage integrase family protein TERM 138 128447 - 128437 - f 91 -4 -5.59879 | overlap 128421 TACAAACATAAAAAA TGTT TGC AACA CATAAAAAGTTTTTT TERM 139 129006 - 129017 + G 74 -2.2 -4.85545 | AGCGATTATTCAAAT CTAC GAAG GTGG TTTTCTTGATTTGAT Pnap_4933 128539 - 129606 + | cobyrinic acid a,c-diamide synthase Pnap_4934 129606 - 130601 + | parB-like partition proteins TERM 140 130636 - 130621 - f 71 -4.8 -4.58395 | opp_overlap 130621 GTTATTGGCGAAAAA GTTTAT ACGT ATAAAC TTTTCATGCAAGTGG TERM 141 130802 - 130786 - f 93 -9.3 -4.68103 | overlap 130788 GCAAGCTGAAGAAAA CGCCCGG TAT CCGGGTG GGATGCGAGGCCACT TERM 142 131079 - 131093 + F 70 -5.6 -4.41047 | overlap 131045 131035 131034 TGCGCAGGCACTGGG CCGTTC TCG GGGCGG TTTTGGTTGCAAGAT TERM 143 131452 - 131425 - f 100 -10 -4.91109 | gap 1, opp_overlap 131425 CCGCTATGAGAAAAA GGCCAGCCATTTC ATG GAAATG-CTGACC TTCGCTGCCGTTTTG TERM 144 131752 - 131729 - f 73 -5.2 -4.59773 | overlap 131731 131738 TCGTACCGCCAAAAA CACGCCAAAC CCAA GCTGGGCGTA GCATCCCGAGGTTTT Pnap_4936 132169 - 132564 + | hypothetical protein TERM 145 132648 - 132599 - f 81 -14.4 -2.58714 | gap 2, overlap 132595 TGCTATATCAACCTA CTTGCTTTCCAGGCGCAGACGCGC TCGC GCGGGAC-GCACCTGGAAAGCA-G CTCTGGCGATTGAAC TERM 146 133185 - 133220 + G 76 -6 -4.67011 | gap 1 AGCCGCTCATGCCCC CTTGCAAGGGCCGCCCC GGC GGGGCG-CCTAGGGAAG TTTTTCGATGCCCTT TERM 147 133349 - 133386 + G 76 -12.7 -3.44319 | AGGCCATTTCGAGCG CTTTTTCCAGGGCGTGC AGCA GCCCGACCTGGAAGAGG TTATGGTGGATTCGA Pnap_4937 133149 - 133856 + | transposase, IS4 family protein TERM 148 134157 - 134170 + F 85 -2.3 -5.53991 | overlap 134158 TTCTTCTCACTTTGT CTCCG TGTT CGGAA TTTTTTTAATGCCTA TERM 149 134727 - 134715 - g 71 -5.5 -4.25104 | CTCCCTTGAGCAAAA GCATC GCA GACGC GCCAGCAGAAATCGG TERM 150 134752 - 134739 - g 71 -8.1 -3.96327 | ACGCGCCAGCAGAAA TCGGC TTCA GCCGA AATAATATTTTTGTG Pnap_4938 134639 - 136054 + | initiator RepB protein TERM 151 136309 - 136344 + F 85 -11.2 -3.9461 | gap 1, overlap 136302 GGGGTGTACTGTACC CGGCACAGTCATTCCCG CTG CGGGAATGACTG-GAAG TTATTGTTAGCCACA TERM 152 137249 - 137265 + G 73 -3.6 -4.68593 | opp_overlap 137233 CGGAATGGCTCACTG CGGCTG AGGCC CAGGCG TTTTTGACTACTGCC TERM 153 137538 - 137566 + G 71 -10.9 -3.53091 | GCCTGGAGCGCTGGT TTTTCCCGCCAGC CCG GCTGGCGGGCCGA TTTCACCAGCGACGT TERM 154 137629 - 137614 - g 70 -7.5 -4.09739 | overlap 137604 GCAACGCTTGTAAAA GCCGG CATCTC CCGGC GCTACGAAGGACCTA Pnap_4939 136855 - 137772 + | phage integrase family protein TERM 155 137953 - 137932 - f 70 -6.7 -4.15565 | gap 1, opp_overlap 137932 TCGATTATGGCAAAA TCAGCTC-AT TAA ATCGAGCTGA TTCATGCCCTACAAC Pnap_4940 137957 - 139345 + | filamentation induced by cAMP protein Fic Pnap_4941 140743 - 139571 - | hypothetical protein TERM 156 140322 - 140354 + g 74 -14.8 -2.62616 | gap 1 GCGTCGAGCCGCAGA GCCGCGGACTCCGGC AAGG GCCGGCG-CTGCGGC TCATCTCCCAGGTCG TERM 157 140824 - 140808 - H 90 -5.1 -5.14965 | opp_overlap 140808 ACTCTTACGAAAAAA CCACC GCATAAG GGTGG CTTCTGAAATCAAAT TERM 158 141293 - 141317 + H 100 -16.5 -6.09888 | CAAATTTTGATTTAG GCGCTCTTGTC AAC GACAAGGGCGC TTTTTTTTGTTCCCG TERM 159 141817 - 141797 - g 76 -14 -3.16564 | GGTGCAGGTCATCAA CCGCTGCC GGCAA GGCAGCGG TGAGATGAAGGAAGC Pnap_4942 141567 - 141950 + | Lipocalin family protein Pnap_4943 142007 - 142117 + | hypothetical protein Pnap_4944 142355 - 142687 + | hypothetical protein TERM 160 142880 - 142892 + G 74 -5.5 -4.49937 | CACATATTGCTTGGT CAGCG CAT TGCTG TTTTCGTGTTGTTGG Pnap_4945 142850 - 143791 + | hypothetical protein Pnap_4946 143958 - 144230 + | hypothetical protein Pnap_4947 144930 - 144385 - | 17 kDa surface antigen TERM 161 145064 - 145074 + H 77 -8.2 -4.13767 | CAGAGTTCTTGCTTG CGCG CCT CGCG TTTTCGACTAGGACG Pnap_4948 145208 - 145828 + | thiopurine S-methyltransferase Pnap_4949 145825 - 146178 + | hypothetical protein TERM 162 146256 - 146219 - f 81 -12.7 -3.05963 | gap 1, opp_overlap 146251, overlap 146242 ACGGTGAGCTGAACA GGCCGG-CGGCGGCAC TTCAAGC ATGGCGCCGGCCGGCC CGGCGTGACGGACAG Pnap_4950 146667 - 146858 + | hypothetical protein TERM 163 147150 - 147113 - gf 83 -12.7 -3.25356 | gap 1, opp_overlap 147117 ATGGAAAGTTATGAA CGCATTGCCGAGCAGGCC AGC GAGCTGCCCGGC-ACGCG CCATGTGTGCATCGG Pnap_4951 146891 - 147289 + | hypothetical protein Pnap_4952 147234 - 147560 + | IS4 family transposase TERM 164 147552 - 147570 + F 91 -6.7 -5.19212 | GTCGATTGGTACCAC GCTCGGT AGGAA ATCGAGC TTTTTTCCTGGTGCT Pnap_4954 148390 - 148899 + | hypothetical protein Pnap_4955 148844 - 149683 + | protein kinase TERM 165 150752 - 150762 + G 78 -6.8 -4.63218 | ATGGGGTGAAATTCG TGCG AAA CGCA TTTTATTCACCGACC Pnap_4956 149694 - 150842 + | hypothetical protein TERM 166 151264 - 151239 - g 86 -6.9 -5.09426 | overlap 151257 151259 151260 GTCAACCTGAAAAAA TCCTACTCTTT TCAG AAAGAGCGGGA GGTCACCAGCCCCGC TERM 167 151975 - 151956 - g 75 -2.8 -4.84529 | gap 1, overlap 151959 151961 GGAGAAAGTCAAAAA GCACAGGCC ATT GACCTA-GC CGTGGTGGCTCAGCA Pnap_4957 151158 - 152231 + | hypothetical protein Pnap_4958 152757 - 152272 - | hypothetical protein Pnap_4959 154750 - 153173 - | hypothetical protein Pnap_4960 155435 - 154791 - | hypothetical protein Pnap_4961 158180 - 155436 - | UvrD/REP helicase TERM 168 155732 - 155721 - G 74 -5.8 -4.53303 | opp_overlap 155725, overlap 155723 155724 CAGCGCGACATAAAA GAGC CGCC GCTC CTCGGCGTTTTCGAA TERM 169 155725 - 155739 + g 73 -8.5 -4.08394 | opp_overlap 155721 155723 155724 GCGACATAAAAGAGC CGCCG CTCCT CGGCG TTTTCGAACGCATCT TERM 170 157011 - 156993 - G 75 -3.1 -4.82901 | overlap 156994 GCCGTTGTAGAAAAA CCAGTTG GCAAT CAACTGC TCACCACGGCTTTTC TERM 171 157775 - 157788 + g 75 -3.1 -4.87786 | gap 1, overlap 157775 GCTGGACAAATTCAT GGG-TG AGC CAGCCC TTTTTCTGCAGTTGG TERM 172 157975 - 157986 + g 76 -5.8 -4.56597 | ATTCCATCAAGGCTT TGGC GCTT GCCA TTTTTAGACGGGAAA Pnap_4962 158662 - 158198 - | DNA topoisomerase type IA Zn finger domain-containing protein TERM 173 158580 - 158565 - G 86 -5.4 -5.1675 | overlap 158567 GCATGCAGTAAAAAA TAGCTG ATGA CAGCCA ATCCCAAGGCCAGCC TERM 174 158996 - 158986 - g 71 -5.4 -4.41348 | TTGTCGGCAAAGAAA CCAA TGG TTGG TGGGGCAAACTCAGC Pnap_4963 158808 - 159566 + | hypothetical protein Pnap_4964 160251 - 161261 + | hypothetical protein Pnap_4965 164164 - 161630 - | hypothetical protein TERM 175 162670 - 162710 + g 81 -13.4 -3.60792 | gap 2, overlap 162670 GTCCAGTGGGGGAGC GGCTGATGCCGGGAATGGGC GCA GCCT-TTCCCGTC-TCAGCC TTTAGCAGTTCGCCA TERM 176 162939 - 162913 - G 70 -8 -4.08706 | opp_overlap 162929, overlap 162926 TCGGCAGCACAGAAA GGTTGAGCACAA ACG TCGCGGTCAACC CGTCGTCTTTTAAAG Pnap_4966 165822 - 164161 - | hypothetical protein Pnap_4967 167438 - 166119 - | hypothetical protein TERM 177 168279 - 168299 + G 83 -9 -4.26903 | TTGATTGATTTCACG GAGCCCAC TTTGC GTGGGTTC TTTTCATGGAATCAA Pnap_4968 168156 - 168407 + | hypothetical protein TERM 178 168702 - 168736 + G 74 -4.9 -4.58663 | gap 1, opp_overlap 168710, overlap 168703 168707 168731 TGTTCTATGTTTGCA GCCATGAACGGTGAGC GCAC GCTCACCGAGC-TGGA TTTTTCCCGGCTGAT TERM 179 168729 - 168710 - g 76 -13.6 -3.18264 | opp_overlap 168707 168703 168702 GTTTGCAGCCATGAA CGGTGAGC GCAC GCTCACCG AGCTGGATTTTTCCC Pnap_4969 168693 - 169091 + | GreA/GreB family elongation factor TERM 180 169295 - 169317 + G 78 -12 -3.73224 | overlap 169315 TGGTTGACCGCGATA GCGCTTACGT CAG ACGTATGCGC TTTCATCAAGGCTGG Pnap_4970 169246 - 170190 + | hypothetical protein Pnap_4971 170407 - 170754 + | hypothetical protein SEQUENCE gi|121583343|ref|NC_008760.1| Polaromonas naphthalenivorans CJ2 plasmid pPNAP04, complete sequence (length 143747) TERM 1 997 - 1017 + G 74 -5.3 -4.57073 | overlap 999 CAACGTGCCAACGGT CGCGGAAAG CGG CTTCCCGGG TTTTTCCGCCGACTC Pnap_4611 206 - 1255 + | hypothetical protein Pnap_4612 1252 - 1425 + | hypothetical protein Pnap_4613 2566 - 1595 - | LysR family transcriptional regulator TERM 2 1674 - 1657 - G 93 -9.1 -4.72272 | overlap 1658 GCCGTCCACGAAAAA CTGCCGC CTGC GCGGCAA GCCATCCCTGCACCA TERM 3 2053 - 2038 - G 76 -6 -4.61873 | GCGCAGAAAGGAAAA CCGGGC TGGC GACCGG AATCAGCCATTCGTC TERM 4 3894 - 3914 + G 71 -13.9 -2.52464 | opp_overlap 3852 CCGGCCATGCTGATG GGCACGGCC GAG GGCCGGGCC TACCTTCAGCGCGAG Pnap_4614 2676 - 4043 + | D-serine dehydratase Pnap_4615 4080 - 5042 + | hypothetical protein TERM 5 5390 - 5368 - f 70 -9.8 -3.42407 | overlap 5369 CACATCAGCAACGAA CTCGCCTCGC CGC GCAAGGCGAT GTGGCTGGCCCAGGC TERM 6 5389 - 5369 - f 78 -13.3 -2.64962 | overlap 5368 ACATCAGCAACGAAC TCGCCTCGC CGC GCAAGGCGA TGTGGCTGGCCCAGG Pnap_4617 6239 - 7759 + | amidase Pnap_4618 8457 - 8170 - | hypothetical protein TERM 7 8470 - 8445 - G 85 -14.7 -3.6215 | opp_overlap 8443 8446 8449, overlap 8438 GCAAGGCACTTGAAA CCACCGGCACC AAGC GGTGCTGGTGG CCGTGTTTACTTGCG Pnap_4619 8961 - 8668 - | hypothetical protein Pnap_4620 9190 - 8966 - | hypothetical protein TERM 8 9126 - 9136 + g 79 -8.2 -4.28254 | opp_overlap 9113, overlap 9128 GAGCGGTGTTCGGCC GCCG CAA CGGC TTTTGCGTCTTGCAC TERM 9 9237 - 9224 - R 70 -5.3 -4.42619 | opp_overlap 9214, overlap 9214 TAATATGGCATAAAA TGCAA CTTT TTGCA ACCAATCAAAGTTCA Pnap_4621 10084 - 9497 - | hypothetical protein TERM 10 9769 - 9790 + g 74 -10.1 -3.68351 | CGTAAGCCAGGTTCG CGCCATCTG CCCT CAGTTGGCG TTTGACTGGTAACCA Pnap_4622 10789 - 10265 - | MarR family transcriptional regulator Pnap_4623 12359 - 11157 - | oxidoreductase domain-containing protein Pnap_4624 13327 - 12359 - | ferredoxin Pnap_4625 14350 - 13367 - | hypothetical protein Pnap_4626 15390 - 14401 - | 4,5-dihydroxyphthalate decarboxylase Pnap_4627 16646 - 15393 - | Rieske (2Fe-2S) domain-containing protein TERM 11 16652 - 16664 + r 73 -10.5 -3.35679 | opp_overlap 16650 GTCTGCGCATCAACT GCCCC ATT GGGGC TTCTCCCTCAACGCG TERM 12 16752 - 16767 + r 71 -8.2 -3.91897 | TACGCGATTGCAGTT GCCGCG CGGG TGCGGC TTTGTCGGTGAAACA Pnap_4628 17203 - 16736 - | hemerythrin-like metal-binding protein TERM 13 16791 - 16807 + g 73 -10.9 -3.57144 | opp_overlap 16781 16787 TGAAACACCAATGGC TTGGCGT TCC ACGCCAA TTTGCAAATCCAGGC Pnap_4629 17550 - 17975 + | hypothetical protein Pnap_4630 18986 - 18006 - | transposase, IS4 family protein TERM 14 18518 - 18528 + g 78 -3.2 -5.09173 | CGGCGAACATTAACC CCAT CTG GTGG TTTTTTACCGTCTTG TERM 15 20354 - 20326 - g 77 -2.3 -5.00616 | opp_overlap 20327 20330, overlap 20327 CGGCGGCGGAAAAAA TCACCGCATGGGA CTG TTCGATGCGATGT TGATTAAGGAAAATC Pnap_4632 19862 - 20719 + | nicotinate-nucleotide pyrophosphorylase Pnap_4633 20814 - 21116 + | hypothetical protein Pnap_4634 21119 - 21520 + | helix-turn-helix domain-containing protein TERM 16 21504 - 21523 + T 75 -3.5 -4.83615 | opp_overlap 21505, overlap 21505 CCGATCTACTCAACG AGGTCAG AACCAC CTGACCG TTTTTCTCGAAACTC TERM 17 21933 - 21954 + T 71 -10.1 -3.60048 | gap 1, overlap 21937 21943 CTTTGCAGAGCCAGC CCGTGGCGCC GCC GGCGCC-TGG CTTTTTTCAAGCCGC TERM 18 21937 - 21951 + T 79 -12.8 -2.92111 | overlap 21933 21943 GCAGAGCCAGCCCGT GGCGCC GCC GGCGCC TGGCTTTTTTCAAGC TERM 19 21943 - 21955 + T 86 -6.9 -5.00884 | overlap 21937 21933 CCAGCCCGTGGCGCC GCCGG CGC CTGGC TTTTTTCAAGCCGCT TERM 20 24025 - 24007 - T 74 -7.4 -4.1899 | overlap 24022 24023 TTACTGCATTGAAAA CGCCTTGT CGG ACAATGCG TCGCTGGCGACCAGG TERM 21 25099 - 25064 - T 83 -9.6 -4.12532 | gap 1, overlap 25066 25067 GCGGTGAGATAGAAA GAGC-GCAAGGACCCAC CGT GCGGGTCCCGGCAGCAC AGCGCCGTCATGACC TERM 22 25097 - 25066 - T 76 -10.8 -3.65996 | gap 1, overlap 25064 25067 GGTGAGATAGAAAGA GC-GCAAGGACCCAC CGT GCGGGTCCCGGCAGC ACAGCGCCGTCATGA Pnap_4637 27233 - 25476 - | hypothetical protein TERM 23 25731 - 25695 - G 71 -9.5 -3.77219 | gap 2, opp_overlap 25695 25694 AGCACTGAAGGCAAA GCG-GGCT-GCTCGCCT GGCGT AGGCGAGCCAGTCACGC GTTTCCAGCGTTTCA Pnap_4638 27452 - 27252 - | transposase IS66 Pnap_4640 27967 - 30036 + | recombinase Pnap_4641 31482 - 30049 - | transposase IS66 TERM 24 30843 - 30861 + g 76 -10.2 -3.94409 | overlap 30817 CAGTGTGTGCCACCA GGCCTGCC GTG GGCATGCC TTTGTCGATGATCTG TERM 25 31498 - 31518 + H 74 -7.5 -4.22338 | overlap 31499 31501 TTTCTCAGCTGAAGC TGACCGGCT GGA AGCCGGTGG TTTTAACCTTCTGAT TERM 26 31501 - 31515 + H 72 -11.4 -3.1169 | overlap 31499 31498 CTCAGCTGAAGCTGA CCGGCT GGA AGCCGG TGGTTTTAACCTTCT TERM 27 31560 - 31606 + H 71 -7.9 -3.97659 | gap 1, overlap 31562 CCAGGCATCAGGTCA CTGGCTCCTT-GCCGTCATGCC AGAT GGCGCGACGGCAAAGGGACTCG TTTGGTTACCTTGTT TERM 28 31562 - 31603 + H 81 -12.9 -3.03282 | overlap 31560 AGGCATCAGGTCACT GGCTCCTTGCCGTCATGCC AGAT GGCGCGACGGCAAAGGGAC TCGTTTGGTTACCTT TERM 29 31759 - 31770 + H 74 -3 -4.87786 | ATCGTAGAAGGCAGA CTAA AGCA TTAG TTTTTCTACCGTTAC TERM 30 32453 - 32439 - g 74 -10 -3.73224 | CGATCGCCCAGCAAA GCATGC TAT GCATGC ATCGCCTGCGTGAAG Pnap_4642 32075 - 33031 + | transposase IS116/IS110/IS902 family protein TERM 31 33106 - 33094 - g 75 -3.3 -4.86621 | overlap 33095 ATTCTGAACCAAAAA CGCCC ACC GGACA CGCCGCCCAAGCTCA Pnap_4643 33025 - 33267 + | hypothetical protein Pnap_4644 34617 - 33334 - | stress protein Pnap_4645 35540 - 35121 - | hypothetical protein Pnap_4646 35774 - 35589 - | hypothetical protein TERM 32 35753 - 35793 + g 70 -10 -3.55203 | TTGGTGAAGTTTGGA TTTGCAGGAAAATAAATG CCATC CATTTGATTTCTTGCAAA TTTCGACAAGGTTTT Pnap_4647 35810 - 37090 + | transposase, IS4 family protein Pnap_4648 37760 - 37056 - | transposase, IS4 family protein Pnap_4649 38474 - 37863 - | IS1477 transposase TERM 33 38185 - 38213 + g 78 -3 -5.00616 | gap 1, overlap 38167 38183 CGTGCCAGTTGCAGC GGCACGC-GCTCG TTCA CGGGCCGCTTGGC TTTTTTGCGCCGGCG Pnap_4650 38773 - 38507 - | transposase IS3/IS911 family protein Pnap_4651 39147 - 38842 - | hypothetical protein TERM 34 39474 - 39461 - g 86 -5.3 -5.19261 | opp_overlap 39473 AAAGGCACTAAAAAA GATGT GGAC ACATC TGCGATCAATGCCTT Pnap_4652 39299 - 40243 + | hypothetical protein TERM 35 40963 - 40953 - g 78 -5.4 -4.67982 | TTGGATTGAAGAAAA GCTT GGT AAGC ATGGCAATGAAGGAT Pnap_4653 40447 - 41526 + | hypothetical protein Pnap_4654 41568 - 42146 + | stress protein Pnap_4655 42183 - 42758 + | stress protein Pnap_4657 43355 - 43936 + | stress protein TERM 36 44473 - 44462 - g 76 -7.2 -4.26903 | opp_overlap 44465 CGTACTCGATGAAAA GCGC TCCA GCGC GCAGTTGCTGCTCGA TERM 37 44863 - 44884 + G 71 -5.7 -4.27617 | overlap 44859 44858 ACCTGCCTTACCTGG CCCTGGCCG GATT TGACCGGGG TTTTGATGGCCTGTC TERM 38 44922 - 44937 + G 74 -9 -3.90112 | CCGATTCGGGCCGGC GTTCGC GTGG GCGAAC TTTCATTGGCGACGG Pnap_4658 43944 - 44963 + | hypothetical protein TERM 39 45102 - 45126 + G 83 -7.1 -4.84918 | gap 1, opp_overlap 45117 ATCTGATCGGCTTTG CTGCGC-GGG CCAACA CCCGGCGCGG TTTTCTGTTTCTGAG TERM 40 45394 - 45412 + G 76 -5.8 -4.56597 | opp_overlap 45388, overlap 45396 ATTTGAAGAGGCGCA CAGCCACG CGC CGAGGCAG TTTTTGCACCGGCCG TERM 41 45709 - 45667 - g 75 -14.1 -3.03124 | gap 1 GCTCAGCGGCGAATA TGCATTCACCGTCGGCCAGC TACA GCAGGCCGACGGTGCA-GCC CAGCGGTTCGAAGCC Pnap_4659 45017 - 46171 + | hypothetical protein TERM 42 46276 - 46289 + G 72 -3.7 -4.60487 | overlap 46276 46277 GCTCCTTCTCAACGC CGCGC CAGC GCGCA TTTTTCGCGCTGATG Pnap_4660 46149 - 46904 + | hypothetical protein TERM 43 47813 - 47852 + G 80 -14.3 -3.17051 | gap 2, overlap 47811 ATAAAGCCCGGTATC GGCGAGGCCACCCGCGTGC TGCT GCGC-CGGGT-GCCGCGCC TCTTAATACTGCGGG Pnap_4661 46901 - 47992 + | hypothetical protein Pnap_4662 47985 - 48932 + | ATP/GTP-binding protein TERM 44 49336 - 49322 - g 75 -4.2 -4.77036 | TTCCAGGATGAAAAA GCCG TGATCGT CGGC GAGATTTACAAGCGC TERM 45 49679 - 49667 - g 72 -7.7 -4.21438 | GAGCCCAAGAAACAA GGCTT TCT AAGCC GGGCGATGGGCAGCG Pnap_4663 48977 - 50191 + | stress protein Pnap_4664 51701 - 50202 - | serine/threonine protein kinase TERM 46 50883 - 50870 - G 71 -5.2 -4.4078 | GGTGTTCAACGAAAA GGGC TTTTTC GCCC ATAGACAGCGACTCG TERM 47 50978 - 51014 + g 71 -5.1 -4.53303 | opp_overlap 50975 ACATGTAGAGAAGCA CTGCCAAGGCGTG CTGATCCGTTT CGCGCTGTGGCAG TTTTCTCTGGGGATC Pnap_4665 53528 - 51798 - | hypothetical protein TERM 48 53164 - 53151 - G 75 -4.5 -4.68724 | CGAGGGAATAGAAAA CGGCT GCAC AACCG ATGAGGGTGGGGGAA TERM 49 53493 - 53478 - G 95 -3.2 -5.71712 | overlap 53479 GCCCAGAGAAAAAAA GGCGTT GATA AACGCA TCTAGCTGTTGATGT Pnap_4666 54583 - 53531 - | von Willebrand factor, type A Pnap_4667 55309 - 54668 - | von Willebrand factor, type A TERM 50 54980 - 54967 - G 74 -2.3 -4.91109 | opp_overlap 54973 CGGTCATGAGAAAAA CCAGC GGGC GCCAG TCGCCTTTGGTATCC Pnap_4668 55957 - 55316 - | stress protein Pnap_4669 56608 - 55970 - | von Willebrand factor, type A TERM 51 56487 - 56474 - G 77 -3.7 -4.93318 | overlap 56465 GATAATCGATAAAAA CGCAG TTTC CAGCG CATAAGGATCCTGAC TERM 52 56727 - 56739 + r 95 -2.7 -5.75945 | opp_overlap 56720 TTATTGAATCAAAAA TGGTT TGA AATCA TTTTTTTTCAAAGCT Pnap_4670 57163 - 56855 - | hypothetical protein Pnap_4671 57910 - 57275 - | hypothetical protein Pnap_4672 58269 - 57907 - | hypothetical protein Pnap_4673 58612 - 58280 - | hypothetical protein Pnap_4674 59625 - 58612 - | curli production assembly/transport component CsgG TERM 53 59566 - 59595 + g 70 -7.9 -4.07568 | opp_overlap 59568 59571, overlap 59568 59571 GGCCAAAATAATCAG AAGAGGCTTTGTC ACAT GGCAAAGCTTCTG TTTTGGAAACACGCA TERM 54 59568 - 59593 + g 70 -10.5 -3.63744 | opp_overlap 59568 59571, overlap 59566 59571 CCAAAATAATCAGAA GAGGCTTTGTC ACAT GGCAAAGCTTC TGTTTTGGAAACACG TERM 55 59571 - 59590 + g 71 -8.6 -3.95435 | opp_overlap 59571 59568, overlap 59568 59566 AAATAATCAGAAGAG GCTTTGTC ACAT GGCAAAGC TTCTGTTTTGGAAAC Pnap_4675 60235 - 59744 - | hypothetical protein Pnap_4676 60390 - 60749 + | hypothetical protein Pnap_4677 61114 - 60764 - | transposase, IS4 family protein TERM 56 60791 - 60824 + g 79 -14.1 -3.4072 | gap 1, opp_overlap 60794 60795, overlap 60795 CAACAAAACCGCAGA GAAGGCCAG-CATTTC CAT GAAATGGCTGGCTTTC TTCTCATAGCGGGTG TERM 57 60795 - 60820 + g 89 -11.3 -4.35483 | gap 1, opp_overlap 60794 60795, overlap 60791 AAAACCGCAGAGAAG GCCAG-CATTTC CAT GAAATGGCTGGC TTTCTTCTCATAGCG TERM 58 61434 - 61462 + H 89 -8.8 -4.64676 | overlap 61435 AAATCGGCGGCAAGT GGCCTCGCATCC CACCC GGATGCCAGGCG TTTTCTTCAGCCTGC TERM 59 61435 - 61461 + H 80 -12.3 -3.38324 | overlap 61434 AATCGGCGGCAAGTG GCCTCGCATCC CACCC GGATGCCAGGC GTTTTCTTCAGCCTG TERM 60 61603 - 61627 + H 100 -3.5 -5.7946 | gap 1, opp_overlap 61592 61588, overlap 61603 61604 GCAACGCGGTCCCAG C-GCAGTGCC CGGGAA GGCCCTGCAG TTTTTTTATTCCGAC Pnap_4679 61667 - 61933 + | hypothetical protein TERM 61 62473 - 62492 + G 100 -6.4 -5.4833 | AGCCGGCAGCGTCAA CCCTCC CCACAACC GGAGGG TTTTTTGTTGCCTGA TERM 62 62891 - 62923 + G 72 -3.9 -4.65916 | overlap 62892 62894 AGCAGAACGCCTTGA TCTGGTGCGGCAAGG ATG CCGTGCCCCAGCTGG TTTTATTGCGATGAG Pnap_4680 62434 - 62937 + | hypothetical protein TERM 63 63368 - 63354 - g 87 -5.6 -5.10461 | TTGATTGAAGAAAAA GACGTC ACA GCCGTC AATCTCGCTGTGGAA Pnap_4681 63330 - 63785 + | hypothetical protein TERM 64 63957 - 63938 - g 80 -5 -4.91712 | overlap 63939 CGCAATGCAGAAAAA CTCAATGC ACAG GCATTGAC CGCCATCATGCCGCT Pnap_4682 63782 - 64255 + | hypothetical protein TERM 65 64503 - 64481 - g 83 -4.8 -5.06451 | overlap 64482 TATTACGCGAAAAAA TTCTGCTTCG ATC CCAAGCAGAT GTCGGCAGACGATCC TERM 66 64617 - 64597 - g 74 -6.2 -4.42653 | gap 1 ACTGGAGGCAGAAAA GCTCAATGC ACAG GCATTG-GC CGCCATCATGCCGCT Pnap_4683 64442 - 64915 + | hypothetical protein Pnap_4684 64908 - 65852 + | ADP-ribosyl-(dinitrogen reductase) hydrolase Pnap_4685 65962 - 66531 + | hypothetical protein Pnap_4686 67548 - 66643 - | TniB family protein Pnap_4687 68055 - 67549 - | integrase, catalytic region TERM 67 67668 - 67680 + g 80 -6.2 -4.79451 | overlap 67666 TTTGGCGCTGTGACT GCCG ACGGG CGGC TTTTGTCTTTGCCGT Pnap_4688 69294 - 68146 - | integrase catalytic subunit TERM 68 69039 - 69012 - G 74 -9 -3.85698 | overlap 69030 69031 GCGTCTCGCGATAAA CGGCGAGCCATC GAAA GACGGTGCGCCG TGACACACCAAACTC TERM 69 70411 - 70429 + G 73 -3.1 -4.72272 | CCGGAATGTCTGATG CCTTTCG CTGCT TGAAGGG TTTTTCGTGACGCGA Pnap_4689 69633 - 70439 + | hypothetical protein Pnap_4690 70747 - 70526 - | hypothetical protein TERM 70 71629 - 71589 - g 95 -11.1 -4.65895 | gap 1, overlap 71591 CGGCGGACCGAAAAA CCGCGCGCAGCCAGCGCC TGAGGG AGCGCCAGCT-CGCGCTG CTGCGCCGCCTCGAG TERM 71 71632 - 71689 + G 72 -14.1 -2.71144 | gap 3 CCAGCTCGCGCTGCT GCGCCGCCTCGAGG--GCCTGGCGGCCG AGACG CCGCAGCCGGGCGACCTCGTGGCGG-GC TGGTTCGACGGCGTG TERM 72 71890 - 71906 + G 73 -3.5 -4.7254 | overlap 71892 71896 GCTGCTGTTTGCCTT GAGCCGG GCG CCAGCGC TTTTTGATGCGCCCT TERM 73 72509 - 72520 + G 70 -7.2 -3.98236 | opp_overlap 72484, overlap 72486 72512 CCCTCGCCTTCCCGC GCGC GCAT GCGC TTTATCGTGCGGTTT Pnap_4691 71222 - 73051 + | phage integrase family protein TERM 74 73408 - 73430 + T 85 -2.6 -5.53288 | opp_overlap 73410, overlap 73410 GCGCGGACATAAAAA AAGGCGTCGT CAG ACAATGCCTA TTTTTTTAACTTAAG TERM 75 73428 - 73410 - T 100 -5.2 -5.71712 | opp_overlap 73408 73410 GCGGACATAAAAAAA GGCGTCGT CAG ACAATGCC TATTTTTTTAACTTA TERM 76 73410 - 73428 + T 70 -5.2 -4.40173 | opp_overlap 73410, overlap 73408 GCGGACATAAAAAAA GGCGTCGT CAG ACAATGCC TATTTTTTTAACTTA TERM 77 73463 - 73445 - T 71 -10.4 -3.17194 | ATTTTTTTAACTTAA GTGTAGTA CGG TACTACAC CCAGAATGATTTCAC Pnap_4692 74488 - 73475 - | parB-like partition proteins Pnap_4693 75657 - 74464 - | cobyrinic acid a,c-diamide synthase TERM 78 76083 - 76141 + G 100 -25.9 -3.42658 | gap 1 TTTGATTGGTTTATC -TGTCCGGCTTTTTATACGAAAACTGAA TTTT TTCTGTTTTCGTATAAAAAGCCGGACAC TTGCATTTTGTGATA TERM 79 76665 - 76649 - g 78 -2.9 -5.03314 | overlap 76650 TTGACCTTGAAAAAA TCTCTCG GCT CAAGAGC TATACAGCTGTTGCA Pnap_4694 76069 - 77499 + | initiator RepB protein Pnap_4695 78503 - 77991 - | hypothetical protein TERM 80 78434 - 78421 - G 85 -5.9 -5.09225 | ATCGCACCGAAAAAA CACCC GAAT GGGCG CACATCGCTCGGCGT Pnap_4696 78617 - 79819 + | beta-lactamase domain-containing protein TERM 81 79895 - 79905 + F 74 -6.8 -4.28548 | ATGCCCGGAGAGATT CAGC GAG GCTG TTTTGATCGGTCGCT TERM 82 80079 - 80131 + F 74 -11 -3.27298 | overlap 80080 80120 TGGGCGTGCCGCTCA AGCTCTCGGGCTGCGCCCCGTGCC CGGAT GGCCCGGGTCACGGCCTGAAGGCA TTGATCCTTCACGCC TERM 83 80080 - 80130 + F 81 -14.5 -2.56164 | overlap 80079 80120 GGGCGTGCCGCTCAA GCTCTCGGGCTGCGCCCCGTGCC CGGAT GGCCCGGGTCACGGCCTGAAGGC ATTGATCCTTCACGC Pnap_4697 80148 - 80435 + | hypothetical protein TERM 84 81271 - 81257 - g 81 -7 -4.67904 | overlap 81259 GACGAACCCGAAAAA GCGCCC CCG GTGCGC GAGCCGCCTGCCAAG Pnap_4698 80432 - 81538 + | parB-like partition proteins TERM 85 81575 - 81565 - f 77 -8.2 -4.07568 | opp_overlap 81565 CGTGTCCCTTGAAAA GGGG CCG CCCC TTCAGTTCCGCCGGC TERM 86 83840 - 83824 - g 70 -10.1 -3.61398 | overlap 83833 83834 CGTGGGCTTCAAGAA CGCTACC AAC GGCAGCG TGGGCGCCGCCATCG Pnap_4700 83264 - 84334 + | phospho-2-dehydro-3-deoxyheptonate aldolase Pnap_4702 84747 - 84547 - | transposase IS66 Pnap_4704 85262 - 87331 + | recombinase Pnap_4705 88750 - 87344 - | transposase IS66 TERM 87 88138 - 88156 + g 76 -10.2 -3.94409 | overlap 88112 CAGTGTGTGCCACCA GGCCTGCC GTG GGCATGCC TTTGTCGATGATCTG Pnap_4706 89174 - 88833 - | IS66 Orf2 family protein Pnap_4707 89563 - 89171 - | transposase IS3/IS911 family protein Pnap_4708 89634 - 89930 + | IS66 Orf2 family protein TERM 88 90625 - 90607 - g 76 -10.2 -3.94409 | overlap 90608 CAGATCATCGACAAA GGCATGCC CAC GGCAGGCC TGGTGGCACACACTG Pnap_4709 90013 - 91506 + | transposase IS66 TERM 89 91719 - 91754 + G 82 -14.6 -3.36749 | overlap 91718 AGCCGGATCTTGCTG CGGCTCCTGGTGCGCG CTTT TGCGCCCGAGGGGCCG TTGATCTTCGGGCTG Pnap_4710 91671 - 92828 + | hypothetical protein TERM 90 92861 - 92846 - f 86 -10.4 -4.18044 | overlap 92842 GGATAAAGAATGAAA GGGACG TCCC CGTCCC GAGCGAGTTGCGACC Pnap_4711 92961 - 93977 + | transposase IS116/IS110/IS902 family protein Pnap_4712 95765 - 94695 - | transposase IS116/IS110/IS902 family protein TERM 91 96315 - 96296 - H 70 -3.4 -4.72272 | opp_overlap 96273, overlap 96297 GGTGTTCACGAAAAA CCGCGAGC GCTT GCTGGCGC ACGATGCGGTCATCG TERM 92 96840 - 96816 - H 74 -7.8 -4.08216 | gap 1 GCATGTGGCGCAAAA CACCTCCG-GC AGGC GCTCGGCGGTG CCTAATGCAATTGCG TERM 93 96904 - 96894 - H 75 -6.8 -4.48449 | GCAGCAAAAGAGAAA GCTC ATC GAGC AGGGTTTTGGCTGGG TERM 94 97364 - 97378 + G 73 -8.6 -3.97042 | TCGTCTCGAAACTTC TACTGG CAA CCAGTA TTTGCTTAATGCTCG Pnap_4714 97342 - 98019 + | hypothetical protein Pnap_4715 98166 - 98402 + | hypothetical protein TERM 95 98515 - 98486 - T 70 -5.6 -4.49389 | overlap 98481 ATCGCAGAAGGAAAA GCCCGGGAGGAT TTCCTG ATCCGCCAGGAC GCGGCAGCGTAGGGT TERM 96 98578 - 98560 - T 100 -5.8 -5.79526 | opp_overlap 98560 98559 ACAGCGTAAAAAAAA GCGGCTTG AAT CGGGCCGC CTTTCAGGCACGGCG TERM 97 98696 - 98715 + T 83 -15 -2.52464 | GCCGGTTTTTTTGCA TGGGGGCG CTGA CGCCCCCA TGGGTTGAACGAACA Pnap_4716 99356 - 98742 - | hypothetical protein TERM 98 99396 - 99378 - H 77 -7.3 -4.25283 | ACTCCTTCAGGAAAA GGTCGGC TTGCC GCCGGCC TGCAGAAGATCTATG Pnap_4717 99489 - 100283 + | hypothetical protein TERM 99 100439 - 100427 - T 80 -9.1 -4.07885 | CAGGCGGCTTGAAAA CGTCG TGT CGACG CCATGCTGCATGCCG Pnap_4718 100899 - 100462 - | UspA domain-containing protein TERM 100 100701 - 100712 + g 82 -3.6 -5.22943 | overlap 100708 CAGTGTCGAGGATTC CCTG GTAG CGGG TTTTTTCGCTTTCCT Pnap_4719 101047 - 100931 - | hypothetical protein Pnap_4720 101362 - 101760 + | hypothetical protein TERM 101 101744 - 101754 + T 70 -6.8 -4.18018 | AGCTTGACGATGGGC GTCC GCT GGAC TTTTGAGTCCGCCCC TERM 102 102489 - 102478 - T 74 -2.2 -5.0133 | GACTTCTGCAAAAAA GACA ATCC TGCC CATGTCAGCCTCTCC Pnap_4721 104099 - 102528 - | FAD dependent oxidoreductase TERM 103 102885 - 102875 - G 86 -8.2 -4.64861 | overlap 102876 TGGGCGCAAAACAAA CCCG CAG CGGG CCGCTTGCTTCAAGC TERM 104 102958 - 102970 + g 71 -9.1 -3.74077 | CCCTGCGCCTGCGCA GCCTG CAC CAGGC TTTGCGTCTGTGGCG TERM 105 103760 - 103738 - G 71 -9.1 -3.73224 | overlap 103739 GCACGCCGCACGAAA GCGCTGCCA TCGGG CAGCAGCGC CTGCGAGTCGGCCGA Pnap_4722 104677 - 104435 - | phage tail collar domain-containing protein Pnap_4723 104939 - 104745 - | transposase TERM 106 104960 - 104999 + r 76 -9.2 -4.06502 | gap 1 ACAGCAGGAACTTTG GTGTTCAGGCCTTTGCGCG TCA CGC-CGATGGCCTGGCCGC TTTCCTTTCGGGCTC Pnap_4724 105964 - 105302 - | transposase Pnap_4725 106434 - 105961 - | transposase TERM 107 106671 - 106681 + H 95 -8.2 -5.09895 | overlap 106657 106663 TGTGCAGCGCCTGCA GCGC CGA GCGC TTTTTTCGATCAATG TERM 108 106917 - 106877 - g 71 -9 -3.72087 | gap 2, opp_overlap 106912 ATCAACCGAAGACAA CGGCTGCAC-CGCGC-AGCG CAG CACTGGCGCCCGTGCAGCGG ACCGCCTGTCCCTTG TERM 109 107467 - 107425 - g 93 -19.1 -3.30619 | gap 1, opp_overlap 107425 107438, overlap 107415 AATGAGGCCGCACAA GCAGCGCTGCCG-GCGCCGC ATGG GCCGAGCACGGCAGCGCCGC CCGGGCCGAGTTTTG TERM 110 107607 - 107585 - g 70 -7.7 -4.07687 | gap 2, opp_overlap 107587 107589, overlap 107586 ACGCGCGGGCCAAAA GCGCGGCGGCC GAC GGC-GCCGC-C TTTGGGCGCCAGAAC Pnap_4726 106744 - 107763 + | hypothetical protein Pnap_4727 108201 - 108569 + | hypothetical protein TERM 111 109186 - 109202 + G 76 -6.5 -4.42386 | TTTCCCGATGCCCAC TGGGGCA ATG TGCGCCA TTTTGTCCATGGAAA Pnap_4728 108970 - 109374 + | hypothetical protein Pnap_4729 111052 - 109715 - | hypothetical protein TERM 112 109857 - 109844 - G 74 -5.2 -4.56597 | TTTTCGCCCCAAAAA CCCG CCTCGC CGGG CAATCAGCCGGATGA TERM 113 111456 - 111468 + H 74 -2.6 -5.06414 | GAGTCGCTCCAGGGT GTGC AAGTC GCGC TTTTTATTGCCGGCC TERM 114 111697 - 111675 - g 75 -3.2 -4.84359 | overlap 111678 111679 111680 GGATCTGCAGAAAAA GAACCGGCCC GCC GTGCTGGCCC AGTTGCGCGAGCAAA Pnap_4730 111604 - 111969 + | histone family protein nucleoid-structuring protein H-NS TERM 115 112055 - 112090 + F 71 -10.5 -3.23853 | opp_overlap 112060, overlap 112060 CAAGCTGCCCGCAAA AAAAAGCCTCAGCAC ATGAAC GCGCTGAGGCTTTTG TCTTGGTTGCGCGGG TERM 116 112085 - 112060 - f 100 -13.3 -5.75342 | opp_overlap 112055 112060 TGCCCGCAAAAAAAA GCCTCAGCACA TGAA CGCGCTGAGGC TTTTGTCTTGGTTGC TERM 117 112060 - 112085 + F 100 -10.4 -4.73864 | opp_overlap 112060, overlap 112055 TGCCCGCAAAAAAAA GCCTCAGCAC ATGAAC GCGCTGAGGC TTTTGTCTTGGTTGC TERM 118 112402 - 112355 - f 79 -12.9 -2.89564 | GCCGCAGGCTAGATA CCAGCACGGC-AGCTAGCCAGCT AGCC AGCTAGCCAGCTAGCCA-GCTAG CCAGGGTATGAAAGC Pnap_4731 112857 - 113309 + | RNP-1 like RNA-binding protein TERM 119 113417 - 113382 - f 89 -16.4 -2.66316 | opp_overlap 113387, overlap 113387 GCGCTGAGCACAGCA TAAAAGGCTTCCAAAC TTCG GTTTGGAAGCCTTTTT ACCTTGAAGGGCCTG TERM 120 113412 - 113387 - f 100 -16.3 -4.52047 | opp_overlap 113387, overlap 113382 GAGCACAGCATAAAA GGCTTCCAAAC TTCG GTTTGGAAGCC TTTTTACCTTGAAGG TERM 121 113387 - 113412 + F 100 -16.3 -4.74103 | opp_overlap 113382 113387 GAGCACAGCATAAAA GGCTTCCAAAC TTCG GTTTGGAAGCC TTTTTACCTTGAAGG TERM 122 113708 - 113698 - g 71 -8.2 -3.90112 | overlap 113699 CTGGCCTCAAGGAAA GCGG TGG CCGC TTCGCCAGCATCAAC Pnap_4732 113643 - 114518 + | glutathione S-transferase domain-containing protein Pnap_4733 114574 - 115206 + | glutathione S-transferase domain-containing protein Pnap_4734 115396 - 115755 + | hypothetical protein Pnap_4735 117353 - 115959 - | integrase catalytic subunit Pnap_4736 118054 - 117479 - | hypothetical protein TERM 123 117625 - 117608 - G 78 -6.3 -4.59853 | opp_overlap 117618 GTAAGCCGGCAAAAA GAACAGT CCCC ACTGCTC GTACTGCCGAACGTG Pnap_4737 120811 - 118166 - | excinuclease ABC, A subunit TERM 124 120456 - 120445 - G 77 -2.2 -5.00616 | overlap 120448 120449 CCGCCCTTGAAAAAA GCAT CCGC ACGC TGCTGGAAATGGTCG Pnap_4738 122066 - 121179 - | hypothetical protein TERM 125 122492 - 122518 + r 73 -10.9 -3.34192 | overlap 122482 CCGCGTTGCCCAGGA TGGCGATGGTT GAGAG AACCCTCGCCA TTGGTTCCAACAGTT Pnap_4739 122797 - 122648 - | hypothetical protein Pnap_4740 122894 - 123970 + | putative transposase TERM 126 124721 - 124740 + G 87 -5.8 -5.14682 | ACTATTACTTTCCGT TATGAAGC GCGG GCTTTATA TTTTGTTTCTTGTGA Pnap_4741 124482 - 125465 + | putative transposase TERM 127 125503 - 125528 + F 75 -11.1 -3.34398 | overlap 125494 125493 125501 CTCGCTGCGGGCTAG GCCTGCGTTCG TTGC CGAGCGCAGAC TGTTTGGCGCGCAGG Pnap_4742 125630 - 126475 + | regulatory proteins, IclR Pnap_4743 126592 - 127617 + | Nitrilase Pnap_4744 127663 - 128835 + | extracellular ligand-binding receptor TERM 128 128881 - 128899 + F 83 -8.1 -4.41047 | opp_overlap 128881 CCATGTGACTGGAAA CCGCGGA CGCCC TCCGTGG TTTTGCTTGCCCCCT Pnap_4745 128937 - 129800 + | inner-membrane translocator TERM 129 130167 - 130179 + G 80 -5.5 -4.77438 | GTCCGGGCTGGCTGC GCTGA TCG TCGGC TTTTTCGTGGTGCGT Pnap_4746 129850 - 130872 + | inner-membrane translocator TERM 130 131118 - 131094 - g 71 -5.6 -4.37886 | overlap 131095 GGAGTCCGGAGAAAA TTGCGCGCCA GGGCA TGGGGCGCAG CTACCAGAAAACCAA Pnap_4747 130865 - 131626 + | ABC transporter related Pnap_4748 131719 - 132432 + | ABC transporter related Pnap_4749 132969 - 132559 - | hypothetical protein TERM 131 133025 - 133040 + r 74 -6.8 -4.37067 | overlap 133019 133012 TTTCAAGAATGGCTC CAGCCG TTCC TGGCTG TTTTCATACTATTTA Pnap_4750 133330 - 133049 - | putative transposase Pnap_4751 134115 - 133591 - | hypothetical protein Pnap_4752 135688 - 134363 - | hypothetical protein TERM 132 134530 - 134543 + g 81 -3.7 -5.07486 | TGAGCGTGGGCGTCT GCCGG GGCA CGGGC TTTTTGTTCAGGATA Pnap_4753 135958 - 135818 - | hypothetical protein Pnap_4754 137340 - 136243 - | GntR family transcriptional regulator Pnap_4757 141700 - 138953 - | 2-oxoacid dehydrogenase subunit E1 TERM 133 139028 - 139016 - G 74 -9.1 -3.94188 | overlap 139020 ATCGACGCCAAAGAA GGCAC GCA GTGCC GCACGCGTGTCACTC TERM 134 139723 - 139697 - G 72 -2.2 -4.7497 | gap 2, opp_overlap 139708, overlap 139698 GGCACCGAGCAAAAA GCCGCGCGCGCG CTGGT CG-GC-CGCTGC CCAGATCTGGTCGCC Pnap_4758 141753 - 141968 + | AsnC family transcriptional regulator Pnap_4759 142523 - 142059 - | AsnC family transcriptional regulator TERM 135 142419 - 142432 + g 77 -2.3 -5.00884 | GCGCGAGCAGGCGGG CGGGC TGAG GTTCG TTTTTTCGGCCAGGT SEQUENCE gi|121583484|ref|NC_008761.1| Polaromonas naphthalenivorans CJ2 plasmid pPNAP05, complete sequence (length 58808) TERM 1 1222 - 1246 + G 100 -12.2 -6.00814 | gap 1, opp_overlap 1222 GTATTCGTTCCAACA CCCACGCACTC TTCG GAG-GCGTGGG TTTTTTTTCGTTCTT Pnap_4760 1158 - 1565 + | hypothetical protein TERM 2 1581 - 1568 - T 71 -9.5 -3.5393 | opp_overlap 1562 AGCAGGCTCCTGAAA GCGGC CAGG GCCGC TTCACCTCTTCTCCT Pnap_4761 2455 - 1583 - | mucin-associated surface protein TERM 3 2627 - 2578 - H 100 -13.7 -3.9373 | gap 1, opp_overlap 2578 2597, overlap 2581 GACGGAAAAGGCAAA CCACTTTGTGGACCAGGCGA-GGC GCC GCCATTGCCTGGTCCACAAAAAAA GCGTGTTGGGAGAAC TERM 4 2624 - 2581 - H 100 -19.8 -3.02204 | gap 1, opp_overlap 2578 2597, overlap 2578 GGAAAAGGCAAACCA CTTTGTGGACCAGGCGA-GGC GCC GCCATTGCCTGGTCCACAAAA AAAGCGTGTTGGGAG TERM 5 2867 - 2891 + H 74 -7.2 -4.09511 | gap 2, opp_overlap 2867 2862 2871, overlap 2867 2888 AAAAAAGGAAGAGGA GG-AAGC-GCGC CAT GCGCAGCTTGCC TTTTCAAGGCATGTT TERM 6 3537 - 3504 - H 93 -13.4 -3.91897 | opp_overlap 3536 GGTCTGACGTACAAA TTGCATGCATGCAT GCATGA ATACATGCATGCAA CCGGCCGGGCTGGTA TERM 7 3611 - 3636 + H 100 -13.3 -4.73108 | opp_overlap 3577 3578 3611 GCTTTGCCCTAGAAA CCCCAGACGGT TCCA AGCGTCTGGGG TTTTCGTTTTATGGG TERM 8 3636 - 3611 - H 93 -13.3 -3.85698 | opp_overlap 3611, overlap 3577 3578 GCTTTGCCCTAGAAA CCCCAGACGGT TCCA AGCGTCTGGGG TTTTCGTTTTATGGG Pnap_4762 3682 - 3879 + | hypothetical protein Pnap_4763 4534 - 4046 - | hypothetical protein TERM 9 4411 - 4394 - G 74 -5.5 -4.42386 | GGCGTAGCGATAAAA TCCAGGG AACT CGCTGGA CAGTGCCATGAGTTG Pnap_4764 5000 - 4584 - | PilT domain-containing protein Pnap_4765 5251 - 4997 - | plasmid stabilization protein TERM 10 5282 - 5270 - H 74 -2.7 -4.85599 | GTCACCTCATAAAAA TACAT TCA ATGCA GTCATTTTACTTAAT Pnap_4766 5451 - 5756 + | hypothetical protein Pnap_4767 6098 - 5856 - | phage tail collar domain-containing protein TERM 11 6627 - 6652 + G 90 -2.5 -5.40474 | GGAAGCGCCATGTCT TCAGACAACGT AAAT GCATTGCCTGA TTTTTTTAACGAGAT TERM 12 6786 - 6771 - g 100 -6.1 -5.54907 | CGTATAAAAGAAAAA CACGG TCTAGG CCGTG AGAACCGAATCCTAA Pnap_4768 6621 - 7325 + | hypothetical protein Pnap_4769 7325 - 7567 + | ExeA-like protein Pnap_4770 7747 - 8313 + | Tn5044 transposase TERM 13 8616 - 8594 - T 100 -14.9 -5.49234 | ACACGCAATAAAAAA GCCAGGCAG TTCAC CTGCCTGGC CCGGAGCAGCGGCAA Pnap_4771 9197 - 8670 - | hypothetical protein TERM 14 8981 - 8997 + g 74 -10.1 -3.68222 | opp_overlap 8980 8981 8983 CATGGGGCAACAAAC CAGCGCT GAT GGCGCTG TTGTTGGCGTTGCGG Pnap_4772 10309 - 9239 - | poly (3-hydroxybutyrate) depolymerase TERM 15 10483 - 10469 - R 71 -10 -3.58269 | opp_overlap 10468 10467 CAATTCATTTTGAAA TGCTGC AGT GCAGCA AATTTGCTTTTGCAA Pnap_4773 10760 - 10458 - | hypothetical protein TERM 16 10556 - 10544 - G 73 -3.3 -4.74598 | opp_overlap 10544 GAAACGGAAAATAAA GCACT ACA AGGGC GTTTCCCGAAGTCAA TERM 17 11175 - 11216 + r 85 -6.5 -4.84017 | gap 1, overlap 11177 11178 GCTTGTTTGTTTCAC TGGCCATCGTTGCGGGACAC GAA GTG-CCCGCAGCCGTGGATG TTTTTGTGACCCCTT TERM 18 11177 - 11214 + r 76 -9.1 -4.03995 | gap 1, overlap 11175 11178 TTGTTTGTTTCACTG GCCATCGTTGCGGGACAC GAA GTG-CCCGCAGCCGTGGA TGTTTTTGTGACCCC TERM 19 11178 - 11213 + r 81 -12.6 -3.01915 | gap 1, overlap 11177 11175 TGTTTGTTTCACTGG CCATCGTTGCGGGACAC GAA GTG-CCCGCAGCCGTGG ATGTTTTTGTGACCC TERM 20 11224 - 11239 + r 71 -10.4 -3.25475 | overlap 11222 CGTGGATGTTTTTGT GACCCC TTCA GGGGTC TGTTGCTGTATTGGG Pnap_4774 12745 - 11708 - | TrfA family protein Pnap_4775 13128 - 12820 - | hypothetical protein Pnap_4776 13754 - 13125 - | cobyrinic acid a,c-diamide synthase TERM 21 13767 - 13796 + H 82 -11 -3.85698 | opp_overlap 13773 CATCAAGATGCCTCC TATATAGCTATC ATTATA GATAGCTATATA TTTATAAACAACGCC TERM 22 14057 - 14039 - H 71 -4.4 -4.59773 | TCCGACCCGGAAAAA CGCCACGC AAT GCTCGACG ACATCAAAAAAACAC TERM 23 15238 - 15222 - g 76 -5.8 -4.5442 | opp_overlap 15222, overlap 15224 15226 TGGTCAAGCAGAAAA CCCACC GCAAG GGTGAG GTGCTGTTCATCGAC Pnap_4777 14048 - 15601 + | N-6 DNA methylase Pnap_4778 15591 - 16838 + | restriction modification system DNA specificity subunit TERM 24 17134 - 17170 + G 72 -14 -2.77658 | gap 2, overlap 17125 17131 CCAGCATTGCCCGGA CGGCCAATTTGGTCAGCA GCC TGCTGACCAA-TTG-CCG TGGTTCCATGTCGTG Pnap_4779 16835 - 17920 + | hypothetical protein Pnap_4780 18013 - 18414 + | hypothetical protein TERM 25 18911 - 18895 - g 76 -9.3 -4.07568 | opp_overlap 18896 18907, overlap 18896 CGGGCGCGCTGAAAA CGGCCGG CTC CCGGCCT TCTATGGGGGTCTTG TERM 26 18910 - 18896 - g 71 -12.8 -3.04398 | opp_overlap 18896 18907, overlap 18895 GGGCGCGCTGAAAAC GGCCGG CTC CCGGCC TTCTATGGGGGTCTT TERM 27 18896 - 18910 + G 76 -12.8 -3.50219 | opp_overlap 18896 18895, overlap 18907 GGGCGCGCTGAAAAC GGCCGG CTC CCGGCC TTCTATGGGGGTCTT Pnap_4781 18461 - 19348 + | hypothetical protein TERM 28 21467 - 21454 - g 74 -9.5 -3.85539 | overlap 21443 TACACCCAGAGCAAA GGCCG GGGT CGGCC CACGGTGGACGCGCA Pnap_4782 19345 - 22434 + | HsdR family type I site-specific deoxyribonuclease Pnap_4783 23646 - 22591 - | hypothetical protein TERM 29 23530 - 23513 - G 83 -4.7 -5.02074 | overlap 23514 23515 TGAGCCTCCAAAAAA GCGCGCG TTTG CGAACGC ACCACAACGGGAAAC TERM 30 23701 - 23673 - R 100 -17.7 -5.66868 | opp_overlap 23673 AATCAATTAAAAAAA CAGATGTGATTCA TTA TGAATCACATCTG TTTGATCCACCCATT TERM 31 23673 - 23701 + r 100 -17.7 -3.73072 | opp_overlap 23673 AATCAATTAAAAAAA CAGATGTGATTCA TTA TGAATCACATCTG TTTGATCCACCCATT Pnap_4784 24048 - 23770 - | hypothetical protein Pnap_4785 24344 - 24090 - | hypothetical protein TERM 32 24391 - 24372 - R 100 -13.6 -4.20516 | opp_overlap 24372 TGTTGATGGAATAAA CAGGCCTC AGTG GAGGCCTG TTTTCTTGTCTCAGC TERM 33 24372 - 24391 + r 100 -13.6 -4.84311 | opp_overlap 24372 TGTTGATGGAATAAA CAGGCCTC AGTG GAGGCCTG TTTTCTTGTCTCAGC Pnap_4786 24602 - 24402 - | hypothetical protein Pnap_4787 25662 - 24931 - | IstB ATP binding domain-containing protein Pnap_4788 27242 - 25704 - | integrase catalytic subunit TERM 34 26328 - 26340 + g 76 -5.5 -4.56597 | opp_overlap 26320, overlap 26320 AAAGGCACTGCGCCT GTTGC CGG GCAGC TTTTTGAAGGCGCGC TERM 35 28167 - 28143 - g 76 -10 -3.95456 | gap 1, opp_overlap 28156 AAACCCAATACGAAA CCGC-CCGGAG ACGT CTCCGACGCGG CCTGGAGAATTTGTT Pnap_4789 27680 - 28204 + | hypothetical protein TERM 36 28249 - 28229 - g 71 -8.1 -3.86524 | overlap 28218 28230 AGACCCGCGCAGAAA TGGCGGCGC TTC GCGACGCCG CCTTGGAAGACCTGA Pnap_4790 28201 - 28617 + | hypothetical protein Pnap_4791 28607 - 29371 + | hypothetical protein Pnap_4792 30814 - 29627 - | hypothetical protein Pnap_4793 31463 - 30822 - | hypothetical protein TERM 37 31110 - 31124 + g 75 -4.2 -4.77216 | GTCCTTGACAGCCTT GGCC GTGCGCG GGCC TTTTTCACTCTTGTT Pnap_4794 32130 - 31549 - | resolvase domain-containing protein Pnap_4795 38079 - 32650 - | hypothetical protein TERM 38 34717 - 34741 + g 78 -9.9 -4.07885 | overlap 34722 GTCCGCGACCGCTTG TCGGTGCGCCG AGT CGGTGCCTCGA TTTTCGAAGCCGATC TERM 39 35143 - 35161 + g 80 -14.6 -3.16564 | opp_overlap 35141 35137 GCGATGTAACTGACG CCACGCCA TGG TGGCGTGG TTCGTCACGTCGCGG Pnap_4796 38473 - 38901 + | hypothetical protein TERM 40 39011 - 39042 + G 78 -5 -4.6971 | overlap 38979 39024 AGGCATCCATGCCAC GGCGCTGCAGTATC TGCC GCAACTGCAGTCCC TTTTGTTCGGCTTTG Pnap_4797 38898 - 39350 + | hypothetical protein TERM 41 39659 - 39627 - g 91 -5.3 -5.27023 | opp_overlap 39658, overlap 39628 ACTCGAAAAACAAAA CCTCGCTGGCGCCAG CAT CCGGCGCAAGCTTGC CGCCCTGGCTTCTTT TERM 42 40104 - 40048 - g 70 -12 -3.15544 | gap 1, opp_overlap 40048 40084 GGCCATGGCCAGGAA GC-GGACAGCCCGCTGTTCCGGCGCAC CCGC GCGCCCCGGGCCGGCGCGCTGGCCAGC GCCCTCACGCCGGGC Pnap_4798 39355 - 40350 + | phage integrase family protein Pnap_4799 40363 - 41442 + | DNA/RNA non-specific endonuclease TERM 43 42314 - 42331 + G 76 -5.5 -4.65895 | overlap 42305 42313 AGCTGGTGCGACGAG CGCGG TTTCGATC CCGCG TTTTTGCATGGCCAG TERM 44 43301 - 43278 - g 84 -8.1 -4.41348 | opp_overlap 43264, overlap 43300 CGCGCCTCAAAGAAA GCGCTTGGG TCTGGG CCCAAGAGC TGCACGCCATGATGG Pnap_4800 41897 - 49429 + | zinc finger, CHC2-family protein TERM 45 50530 - 50512 - g 71 -8.8 -3.93288 | overlap 50515 GCGCAGTTAAGCAAA CAAGCGCG GGC CGCACTCG AGGCCATGGGGGTGC TERM 46 51111 - 51124 + G 79 -8.1 -4.25681 | opp_overlap 51111 GGCCATCACAGAGGA GGGCT TGAA AGCCC TTTGTTCACTTCAAT Pnap_4801 49675 - 51168 + | transposase, IS4 family protein Pnap_4802 51734 - 51354 - | PilT domain-containing protein TERM 47 51759 - 51738 - R 81 -12.9 -3.15861 | opp_overlap 51749 CAGTACGTTCATGAA GCGGGCGCG TCTT CGCGCCGGC GAGGCGCGAGTTCAA Pnap_4803 51937 - 51731 - | hypothetical protein Pnap_4804 53060 - 52074 - | hypothetical protein TERM 48 53101 - 53081 - R 73 -8.9 -3.83026 | opp_overlap 53094, overlap 53082 TTTCTTCACAGGAAA CCCCGGCCT TTC AGGCCAGGC CAGGCACGGCCTTCT TERM 49 53100 - 53082 - R 75 -12.4 -2.89602 | opp_overlap 53094, overlap 53081 TTCTTCACAGGAAAC CCCGGCCT TTC AGGCCAGG CCAGGCACGGCCTTC Pnap_4805 54088 - 53528 - | hypothetical protein TERM 50 53987 - 53997 + g 74 -5.4 -4.56597 | GGCAGTTCCTCCGAC CCTT GCA AAGG TTTTTCCGCGAAAGC Pnap_4806 55154 - 54174 - | hypothetical protein Pnap_4807 55410 - 55634 + | helix-turn-helix domain-containing protein Pnap_4808 56309 - 55758 - | hypothetical protein Pnap_4810 57078 - 57341 + | hypothetical protein Pnap_4811 57596 - 57390 - | putative transcriptional regulator Pnap_4812 58718 - 57909 - | hypothetical protein TERM 51 58051 - 58072 + g 91 -17.3 -3.28712 | ATCAGGTCTGACCAC GGCTGGCCG ACAT CGGCCAGCC TTCTCACAAAACCGA TERM 52 58105 - 58084 - G 100 -14.5 -4.37092 | opp_overlap 58090 AGCCTTCTCACAAAA CCGATCTGC CTGG GCAGATCGG GCATCACTTCGGCTT TERM 53 58341 - 58377 + g 84 -15.1 -3.28712 | TGCAGCACCGGGCCG GGTCAGGCGAACCAGCT CGT AGCCGGTGAGCCTGACC TTGTCCAGGCGCGGA SEQUENCE gi|121583543|ref|NC_008762.1| Polaromonas naphthalenivorans CJ2 plasmid pPNAP06, complete sequence (length 21611) Pnap_4974 1798 - 1046 - | hypothetical protein Pnap_4975 2982 - 1798 - | hypothetical protein TERM 1 2602 - 2613 + g 75 -4.4 -4.77173 | overlap 2604 CACCTTCTGCAACTG CTCA AGCG TGAG TTTGTTTTGTAGAAA Pnap_4976 3630 - 3010 - | putative phage repressor TERM 2 3041 - 3091 + g 70 -10.5 -3.59023 | opp_overlap 3042, overlap 3042 3044 GTCAGCCAGGCCAGA ACGCGA-CCGCAGATGGTCAGTTCG TTC TGAGC-GACCAACTGCGGGTCGTGC TTGTCATTGTCTGAG TERM 3 3042 - 3090 + g 72 -14 -2.74931 | opp_overlap 3042, overlap 3041 3044 TCAGCCAGGCCAGAA CGCGA-CCGCAGATGGTCAGTTCG TTC TGAGC-GACCAACTGCGGGTCGTG CTTGTCATTGTCTGA TERM 4 3044 - 3088 + g 70 -13 -2.91306 | opp_overlap 3042, overlap 3042 3041 AGCCAGGCCAGAACG CGA-CCGCAGATGGTCAGTTCG TTC TGAGC-GACCAACTGCGGGTCG TGCTTGTCATTGTCT Pnap_4977 4507 - 3998 - | hypothetical protein Pnap_4978 4917 - 4501 - | hypothetical protein TERM 5 4627 - 4613 - G 78 -7.1 -4.54047 | TCAGTGTAGAGAAAA CGGCA TGCCC TGCCG TCCAGCTTGGTTGCG Pnap_4979 5346 - 5113 - | hypothetical protein Pnap_4980 5972 - 5343 - | cobyrinic acid a,c-diamide synthase Pnap_4981 7070 - 6171 - | mucin-associated surface protein TERM 6 7122 - 7133 + r 79 -3 -5.16681 | opp_overlap 7122 AACGTAATCATAACA GATA ACAT TATC TTTTGTTATTTTTAG Pnap_4982 9689 - 7158 - | relaxase/mobilization nuclease family protein TERM 7 7264 - 7296 + g 73 -3.4 -4.68506 | overlap 7266 7267 ACGGCCAGGCTCTCG TACCGCTCAAGC-TGC TTG GCGTGCT-GTGCGGTG TTTTTGCGGTTACTT TERM 8 7534 - 7549 + g 74 -4.6 -4.57569 | overlap 7507 7521 GCGGTGATTGCGTCC CAAGCG CAAG CGCCTG TTTTTGACCCAATCC TERM 9 7584 - 7595 + g 70 -7.2 -4.07568 | overlap 7587 7589 CACGTACCAAGGCTC CGGG TCGC CCCG TTTTGCGGCGGCGGC TERM 10 7672 - 7682 + g 76 -8.2 -4.15508 | overlap 7660 TCCTGCGGGGCCACT GCGC CCA GCGC TTTTGCGGCTTCATT TERM 11 8084 - 8094 + g 81 -2.4 -5.13741 | opp_overlap 8068, overlap 8068 8074 CGTTGGCCACGGCCA CGGC CAC GGCG TTTTTCTTGAATTCG TERM 12 9257 - 9273 + g 81 -13.7 -3.58914 | GTTTGGTCTTGCTAT CGGCGAG CAA CTCGCCG TTGTCGTTGGTTTGA Pnap_4983 10114 - 9788 - | hypothetical protein Pnap_4984 10429 - 10821 + | hypothetical protein Pnap_4985 10818 - 11522 + | hypothetical protein TERM 13 11546 - 11534 - g 72 -7.7 -4.17491 | overlap 11545 ATGAAATTTGCAAAA GCGTT TGA AACGC TGAACGGTCGGCCAC TERM 14 11907 - 11888 - g 78 -5 -4.80455 | opp_overlap 11894 11898 11900, overlap 11893 TATGCAAAGACAAAA GCAATTCC AGTT GCAATTGC AACAGTTGCAATGGC TERM 15 11900 - 11922 + G 71 -9.2 -3.81651 | opp_overlap 11888 11893, overlap 11894 11898 AAAGCAATTCCAGTT GCAATTGCAA CAG TTGCAATGGC TGTTTTGGTTGGGAT TERM 16 12060 - 12047 - g 77 -3.7 -4.8543 | overlap 12049 CAACTTGCACAAAAA GACGC AGAG GCGGC GGCAACGATTGCAAA Pnap_4986 11519 - 12316 + | hypothetical protein Pnap_4987 16660 - 13196 - | hypothetical protein TERM 17 13603 - 13572 - G 93 -17.4 -3.53012 | gap 1, opp_overlap 13581, overlap 13573 13576 CGTTGGGCGTTCAAA GCCACCAGACGCGCC AGG AGCGCGTCTGGT-GC AGCGGTGAAGGGGTA TERM 18 13603 - 13573 - G 84 -17.6 -2.71712 | opp_overlap 13581, overlap 13572 13576 GTTGGGCGTTCAAAG CCACCAGACGCGCC AGG AGCGCGTCTGGTGC AGCGGTGAAGGGGTA TERM 19 13600 - 13576 - G 86 -17.9 -2.64155 | opp_overlap 13581, overlap 13572 13573 GGGCGTTCAAAGCCA CCAGACGCGCC AGG AGCGCGTCTGG TGCAGCGGTGAAGGG TERM 20 13830 - 13845 + g 71 -4.6 -4.42386 | TGGGCGTCGATCTGT TCGGCC AGCT GGCGGA TTTTGTCGGTCAGCG TERM 21 14031 - 14012 - G 75 -2.8 -4.87803 | gap 1, overlap 14013 14014 14016 CACGCCCAAACAAAA CGCATCGTC CAA GGCGATG-G CAATCAGCTTGTTGT TERM 22 14189 - 14209 + g 76 -8.9 -4.19704 | opp_overlap 14188, overlap 14187 CAACTTCGCATAACC GGCACCGTC TTT GCTGGTGCC TTTTGCATCGCGTTC TERM 23 14707 - 14687 - G 73 -11.1 -3.59979 | GTCGGGCACGGCAAA GGCCAGTGC GGT GGACTGGCC GAGCGCGGCCTGAAC TERM 24 15433 - 15405 - G 80 -5.2 -4.90778 | gap 1, overlap 15406 GTGACGTAAAGAAAA TTGC-CGCTCCCG CAGG CGGGATCGAGCAC GCGCAGGGTGCAAAG TERM 25 15477 - 15461 - G 71 -10.8 -3.53343 | opp_overlap 15457, overlap 15448 AAGGCGGTGGTGAAA GCGCCG GACCT CGGCGC GGGCTTCGGTCAGCT TERM 26 16383 - 16399 + g 93 -2.1 -5.63103 | overlap 16385 CTGAAGCGTTCGGTG CCCACGG AGG CCTTGAG TTTTTTTGATTCGGC TERM 27 16698 - 16710 + r 71 -7.7 -4.03043 | opp_overlap 16697 TGGCAGGAATCGAAT GTCTC TTG GAGAC TGTTTTTACATTTAT TERM 28 16760 - 16772 + r 70 -3.3 -4.74598 | opp_overlap 16760 GTCACTTCGGGAAAC GCCCT GGT AGTGC TTTATTTTCCGTTTC TERM 29 16980 - 16992 + r 71 -10.5 -3.29142 | overlap 16965 16978 16975 GGGGGCCGTTCTGTA CCCCC TTT GGGGG TCTGTTGTTGATGGC TERM 30 17010 - 17026 + r 89 -2.9 -5.72207 | overlap 17012 TGTTGTTGATGGCCG TTGAGCG AAG CGCTGGA TTTTTTTCGTTTGCG Pnap_4988 18218 - 17280 - | plasmid replication initiator protein-like protein Pnap_4989 18595 - 18290 - | addiction module antitoxin Pnap_4990 19037 - 18573 - | hypothetical protein Pnap_4991 19736 - 19167 - | resolvase domain-containing protein TERM 31 19793 - 19809 + r 86 -10.9 -4.13014 | opp_overlap 19793, overlap 19784 ATTTGAGCCAAAAAA TGGGCTT TTA AAGCCCA TTTTGCAAGTGTCAA TERM 32 19809 - 19793 - R 100 -10.9 -5.09225 | opp_overlap 19784 19793 ATTTGAGCCAAAAAA TGGGCTT TTA AAGCCCA TTTTGCAAGTGTCAA Pnap_4992 20820 - 20107 - | replicative DNA helicase TERM 33 20549 - 20533 - G 81 -4.3 -5.0538 | CTCTAGGGTAAAAAA CCAACCG TAT CGACCGG ACTGAACGGATTTAA SEQUENCE gi|121583564|ref|NC_008763.1| Polaromonas naphthalenivorans CJ2 plasmid pPNAP07, complete sequence (length 9898) Pnap_4994 889 - 1359 + | XRE family transcriptional regulator TERM 1 1543 - 1560 + T 74 -8.3 -3.98716 | opp_overlap 1544, overlap 1544 GCCGCCAACGAAAAA ACGCCCC ATAG GGGGCGC TTTGATTCATACTTT TERM 2 1544 - 1559 + T 75 -11.8 -2.98145 | opp_overlap 1544, overlap 1543 CCGCCAACGAAAAAA CGCCCC ATAG GGGGCG CTTTGATTCATACTT TERM 3 1559 - 1544 - T 100 -11.8 -5.26875 | opp_overlap 1544 1543 CCGCCAACGAAAAAA CGCCCC ATAG GGGGCG CTTTGATTCATACTT Pnap_4995 1841 - 1632 - | plasmid partition protein ParB, truncated TERM 4 1804 - 1822 + g 100 -4.4 -5.85737 | overlap 1802 1796 TTGACGCTGGGACGG CCAGCGGC CAG GCCTGTGG TTTTTTTGTTCATGT TERM 5 1836 - 1847 + g 84 -4.4 -5.18866 | GGTTTTTTTGTTCAT GTAC ATTT GTAC TTTTATTTATTTGAG Pnap_4996 2483 - 1854 - | cobyrinic acid a,c-diamide synthase TERM 6 2804 - 2792 - R 70 -9.1 -3.70751 | opp_overlap 2803 CAAGAACGCGAATAA CCAGC ATG GCTGG CGTGCCAAAGGCCTT TERM 7 3128 - 3143 + r 76 -3.2 -5.02074 | overlap 3129 GACCGCGTTTGATCA TCAAGG ATTG CCTTGC TTTTTTCCAGCGTAA Pnap_4997 3564 - 3265 - | hypothetical protein TERM 8 3862 - 3814 - g 91 -9.7 -4.62336 | gap 4 ACCTTAGCGTAAAAA CGGTAAGCCGCTCGGCAGGCAGGTC TGC GACC-GCC-GCCGC-C-GCCTACCG TGCTGGCGTGGAAAT Pnap_4998 3786 - 6086 + | MobA/MobL protein Pnap_4999 6538 - 6101 - | hypothetical protein Pnap_5000 6780 - 6535 - | hypothetical protein TERM 9 7099 - 7148 + H 100 -15.5 -3.67546 | opp_overlap 7103 7106, overlap 7103 AAATGTAGGCTTAAG CAAAGTATCTATAGTTTTAAATA AATT TATTAAAAACTATAGAGACTTTG TTATAGTTTGGTTTT TERM 10 7103 - 7144 + H 93 -10.5 -4.4281 | opp_overlap 7103 7106, overlap 7099 GTAGGCTTAAGCAAA GTATCTATAGTTTTAAATA AATT TATTAAAAACTATAGAGAC TTTGTTATAGTTTGG TERM 11 7144 - 7103 - H 80 -10.5 -3.91084 | opp_overlap 7103 7099, overlap 7106 GTAGGCTTAAGCAAA GTATCTATAGTTTTAAATA AATT TATTAAAAACTATAGAGAC TTTGTTATAGTTTGG Pnap_5001 7191 - 7706 + | hypothetical protein TERM 12 7853 - 7873 + F 95 -8.3 -4.96848 | AGGGCGATGAGCAGG TCGAGGTGT TTC ATGCCTCGA TTTTTCTGTCACGAC Pnap_5002 8054 - 8710 + | hypothetical protein Pnap_5003 9026 - 8745 - | hypothetical protein SEQUENCE gi|121583582|ref|NC_008764.1| Polaromonas naphthalenivorans CJ2 plasmid pPNAP08, complete sequence (length 6459) Pnap_5004 922 - 89 - | replication C family protein Pnap_5005 1751 - 912 - | putative DNA helicase TERM 1 1258 - 1229 - G 75 -3.5 -4.83169 | gap 1, opp_overlap 1236 AGTGGTGCAGAAAAA CAATTGC-GCAGCC TGT GGCGGCTGTAATCG CCTCCATGCGCCCCA TERM 2 1791 - 1833 + r 100 -16.2 -4.1523 | overlap 1794 GAAATTTGGTTGAGT TATGGCAGTCCCGCGGCTCG CCA CAAGCCGCGGGACACCCCTA TTCTTTGTCGTTGCA TERM 3 1794 - 1830 + r 95 -17.9 -2.78809 | overlap 1791 ATTTGGTTGAGTTAT GGCAGTCCCGCGGCTCG CCA CAAGCCGCGGGACACCC CTATTCTTTGTCGTT Pnap_5006 4519 - 2033 - | relaxase/mobilization nuclease family protein TERM 4 2091 - 2112 + g 86 -15.9 -3.56643 | TTCCAGTCTTTGGCA CCCTCAGGG ACCT CCCTGAGGG TTTGAACGCTCTCAG TERM 5 2973 - 2983 + g 73 -6.8 -4.38154 | overlap 2965 TTTATGACTGGAGCA GCTG CGT CAGC TTTTCTACACGCTCT Pnap_5007 4893 - 4522 - | mobilisation protein TERM 6 4969 - 5017 + r 74 -11.2 -3.16191 | gap 2, opp_overlap 4973 4974 4989, overlap 4989 TGGGGTGCAACCCCA GCAAGCCCCGTATACAAAAACCGC TTG GCGG-TTTTGTATACG-GGTAGGC TTGCTAAAGGTATCA TERM 7 5014 - 4973 - R 87 -13.9 -3.18681 | gap 1, opp_overlap 4969 4989, overlap 4974 4989 GTGCAACCCCAGCAA GCCCCGTATACAAAAACCGC TTG GCGG-TTTTGTATACGGGTA GGCTTGCTAAAGGTA TERM 8 5013 - 4974 - R 90 -17.4 -2.50994 | gap 1, opp_overlap 4969 4989, overlap 4973 4989 TGCAACCCCAGCAAG CCCCGTATACAAAAACCGC TTG GCGG-TTTTGTATACGGGT AGGCTTGCTAAAGGT TERM 9 4989 - 4999 + r 87 -8.2 -4.53303 | opp_overlap 4974 4973 4989, overlap 4969 CCCCGTATACAAAAA CCGC TTG GCGG TTTTGTATACGGGTA TERM 10 4999 - 4989 - R 95 -8.2 -4.96848 | opp_overlap 4989 4969, overlap 4974 4973 CCCCGTATACAAAAA CCGC TTG GCGG TTTTGTATACGGGTA Pnap_5008 5627 - 5172 - | hypothetical protein SEQUENCE gi|121602919|ref|NC_008781.1| Polaromonas naphthalenivorans CJ2, complete genome (length 4410291) TERM 1 3482 - 3469 - g 71 -5.9 -4.25859 | opp_overlap 3477 3478 TCGAAGTCAAAACAA CCACC TTTG GGCGG GACACGCCATTTTTC TERM 2 3477 - 3491 + G 77 -2.7 -4.98531 | opp_overlap 3469, overlap 3478 AAAACAACCACCTTT GGGCG GGACA CGCCA TTTTTCGTTTCGCGA Pnap_0002 2826 - 3659 + | hypothetical protein Pnap_0003 4522 - 3701 - | hypothetical protein TERM 3 4685 - 4713 + H 71 -5.9 -4.30844 | opp_overlap 4693, overlap 4694 TCTCGTCCTGCTTGT GCGGAATATGCCT TCA AGGCGCTTTTCGC TTTTGCTCATCCACT Pnap_0004 4747 - 4953 + | hypothetical protein TERM 4 4984 - 4998 + F 70 -5.6 -4.52505 | overlap 4985 TAATGCCGGGCCGCT ACTGCC GAT GGCAGC TTTTCACTTTTTCTT Pnap_0005 5033 - 5608 + | NnrU family protein TERM 5 5749 - 5727 - f 71 -4.8 -4.58395 | CCGATGGTTGAAAAA GCGCCATG AGCGGGG CATTGCGC ATCGACTTACACACT Pnap_0006 5834 - 6508 + | hypothetical protein TERM 6 6592 - 6619 + T 100 -12.7 -5.40072 | opp_overlap 6592 CGCTGGAACAAAAAA GCAGCATCGGC CTTTGC GCCGCTGCTGC TTTTTTTGGGGAAAA TERM 7 6619 - 6592 - T 100 -12.7 -5.4505 | opp_overlap 6592 CGCTGGAACAAAAAA GCAGCATCGGC CTTTGC GCCGCTGCTGC TTTTTTTGGGGAAAA Pnap_0007 6913 - 6653 - | cell division topological specificity factor MinE Pnap_0008 7735 - 6920 - | septum site-determining protein MinD Pnap_0009 8641 - 7871 - | septum site-determining protein MinC TERM 8 7911 - 7944 + g 71 -13.7 -2.52464 | CGTTCGCCGTCCGGG CCGTCCACCAGCCGC ACTT GCGCCGGGTGGCCGG TCACTTCGGGCGGCA TERM 9 8846 - 8834 - g 87 -5.5 -5.20333 | CATTGAGAACAAAAA GGGAC ATT ATCCC GGAACTCGATGAACT Pnap_0010 8791 - 9030 + | hypothetical protein Pnap_0011 9140 - 9574 + | hypothetical protein TERM 10 9639 - 9652 + T 77 -8.1 -4.15044 | overlap 9632 9647 GGTTTCAAGGCAGCG CCAGG CCTG CCTGG TTTCTTGGCCCGGGC Pnap_0012 10642 - 9620 - | hypothetical protein TERM 11 10039 - 10028 - G 70 -7.2 -4.07568 | overlap 10029 GCGCTGGCGTGAAAA GGCG CAGG CGCC CAGGTAGGCCAGCGC Pnap_0013 11936 - 10635 - | cardiolipin synthase 2 Pnap_0014 12845 - 12012 - | endonuclease/exonuclease/phosphatase Pnap_0015 13194 - 13568 + | hypothetical protein Pnap_0016 14670 - 13600 - | NADPH-dependent FMN reductase TERM 12 14399 - 14415 + g 72 -4.3 -4.57073 | overlap 14400 14401 GGCGTGGCCGGGTCT TTCCAGG TGG CCTGGGC TTTTTGCAGCCGCTC TERM 13 14889 - 14852 - R 100 -15.7 -5.64274 | gap 1, opp_overlap 14852 14888 GCAGGCACAAAAAAA CCTGCACCG-CCACGCTT GAA AAGCGCAACCGGTGCAGG TGCTTCAAGGCCCGG Pnap_0017 15508 - 14939 - | hypothetical protein TERM 14 14977 - 14997 + g 72 -2.3 -4.81212 | overlap 14974 14978 CGCCTTCATGGTGGC CGCGCCCGC CTT GCCGGCCCA TTTTCTTGTGCTCGG Pnap_0018 15738 - 16397 + | hypothetical protein TERM 15 17577 - 17557 - g 78 -6.7 -4.57073 | overlap 17562 CAGGCGCTGGAAAAA GTCAACGGC AAG GCCGAAGAC CTGACCTGGGAAATC TERM 16 17892 - 17872 - g 72 -11.9 -3.27774 | GACGCCAATGACGAA GCGCAGTTC GCC GAACTGCAC ACGCTGGGCGAACTC TERM 17 18384 - 18372 - g 91 -9.1 -4.4078 | opp_overlap 18371 18370 GCTGCCCAAGGAAAA CGCCA AGG TGGCG CATTTCTGCTCGATG Pnap_0019 16663 - 18579 + | thiamine biosynthesis protein ThiC TERM 18 19268 - 19303 + G 71 -11.2 -3.53224 | overlap 19267 19292 19294 ACGCTGGACGCGGCC GCG-CTGGCGCAGCGC GAGCCG GCGCTG-GCCGGGCGC TTTGGCGGCGGCCTG Pnap_0020 18854 - 19921 + | glycine oxidase ThiO Pnap_0021 19946 - 20155 + | thiamine biosynthesis protein ThiS thiG 20158 - 20976 + | thiazole synthase Pnap_0023 21038 - 21679 + | thiamine-phosphate pyrophosphorylase Pnap_0024 21825 - 22331 + | hypothetical protein Pnap_0025 23635 - 22361 - | glycosyl transferase family protein TERM 19 23640 - 23599 - G 76 -7.3 -4.26344 | gap 2 ACAGCGCCAGCAAAA CCGCCATGACC--CGGGCG AAGGTG CGCCGGGCGGTCACAGCGG CCTCGCCACGGTGAT Pnap_0026 24183 - 23632 - | hypothetical protein Pnap_0027 25053 - 24208 - | hypothetical protein TERM 20 24379 - 24365 - G 95 -12.8 -4.37092 | AGGCGGGTTAGAAAA GCGCGG TTG CCGCGC CCCAGGTACAGCGTC TERM 21 24691 - 24656 - G 86 -6.7 -5.00616 | gap 1, overlap 24657 24658 24684 CCCGCCGGTAAAAAA GC-GGCCAGCCCGGCG GCCAG CGCCAAGAGGGCCAGC AGCGCCACGGCCAGC Pnap_0028 27234 - 25129 - | vault protein inter-alpha-trypsin subunit TERM 22 25521 - 25537 + g 72 -7.2 -4.13767 | opp_overlap 25509 25513, overlap 25509 25493 25514 AAAGGTAGCGCAGCG CGGCCG TGTTC TGGCCG TTTTGCGCTGGCACG TERM 23 25890 - 25879 - G 74 -5.8 -4.41494 | GATGCCGAATGAAAA CAGG TTCG CCTG CGACAGGTTGCGCCG TERM 24 26470 - 26451 - G 76 -10.6 -3.90112 | opp_overlap 26448 26451 CGCTGCGCAAGGAAA CGGCGGCG CGTT CGTCGCCG TCCTTGGTCACGTCG TERM 25 26905 - 26957 + g 70 -12.7 -2.92077 | gap 1, opp_overlap 26929 26933 26935, overlap 26905 26926 26943 GTTCATGCCATAGAC GGCGGCGCG-CGTCGAGGCGGG AAAGACATAG CGCGCCTCGATGGCGCGCTGGC CTTCGTTTTTGTAGC TERM 26 26905 - 26958 + g 83 -12.5 -3.88001 | gap 2, opp_overlap 26929 26933 26935, overlap 26905 26926 26943 GTTCATGCCATAGAC GG-CGGCGCG-CGTCGAGGCGGG AAAGACATAG CGCGCCTCGATGGCGCGCTGGCC TTCGTTTTTGTAGCG TERM 27 26953 - 26935 - G 73 -13.1 -3.18571 | opp_overlap 26905 26905 26926 26943, overlap 26933 26929 GGCGGGAAAGACATA GCGCGCC TCGAT GGCGCGC TGGCCTTCGTTTTTG TERM 28 26943 - 26962 + g 80 -4.9 -4.84359 | opp_overlap 26935 26933 26929, overlap 26905 26905 26926 AGACATAGCGCGCCT CGATGGC GCGCTG GCCTTCG TTTTTGTAGCGCTGG Pnap_0029 29060 - 27624 - | sensory histidine kinase CreC TERM 29 27998 - 27957 - G 80 -5.7 -4.72272 | gap 1, overlap 27958 27959 27961 GCGGCGCAGCAAAAA GCCATCGCCTTCGACCGCAG CGT CTTCGGGCGCAT-CGACGGC GATGCGAATGCCGCG TERM 30 28727 - 28714 - G 72 -4.5 -4.59773 | overlap 28715 28716 TGCCACTGCGAAAAA TCGGC GCCC ACCGA CTTGCCCAGCGAGTC Pnap_0030 29905 - 29057 - | two component transcriptional regulator TERM 31 29915 - 29890 - G 100 -14.7 -5.43866 | opp_overlap 29890 GAAGGCGTAAAAAAA GCTGCCGGGCA GTCA TGCCGGGCAGC TTTTTCAGGGCCTTG TERM 32 29890 - 29915 + g 100 -14.7 -4.58283 | opp_overlap 29890 GAAGGCGTAAAAAAA GCTGCCGGGCA GTCA TGCCGGGCAGC TTTTTCAGGGCCTTG Pnap_0031 31055 - 29940 - | NADH:flavin oxidoreductase/NADH oxidase Pnap_0032 31502 - 31687 + | hypothetical protein Pnap_0033 31692 - 32006 + | hypothetical protein TERM 33 32006 - 32038 + F 71 -4.8 -4.59954 | gap 2, overlap 32008 32030 GCGCAGGCATGATTA GGCGGGCAGCTGCAGA GGG TC-GCA-CGGCCCGGC TGTTTTTTTGTTATT TERM 34 32030 - 32040 + F 100 -4.6 -5.95946 | overlap 32008 32006 CTGCAGAGGGTCGCA CGGC CCG GCTG TTTTTTTGTTATTCC TERM 35 32185 - 32221 + G 82 -10.7 -4.07568 | GGAGGTTGTCGAGGA GCGGCTCACCATCACGC CGA GCATGAAGGTGCGCCAC TTTTGCAACGAACGC TERM 36 32238 - 32248 + G 71 -8.2 -3.87994 | opp_overlap 32238 TTTGCAACGAACGCA GCGG CAA CCGC TTTATCCGGCTGGAT Pnap_0034 32075 - 32929 + | transglutaminase domain-containing protein Pnap_0035 34937 - 33135 - | amidase TERM 37 34457 - 34444 - G 72 -3.8 -4.65895 | overlap 34445 GTGCCCAGTGAAAAA CTCG CATGGC CGAG CGCCACCGACACCGC Pnap_0036 38545 - 34934 - | biotin carboxylation domain-containing protein TERM 38 35474 - 35450 - G 72 -4.2 -4.57073 | gap 1 GATCTGGTCGAAAAA GCGCAGC-AGC CACG GCTTGCCGGGC TCGAAGGCTGGGGCG TERM 39 36133 - 36187 + g 77 -13.5 -3.35679 | gap 2, opp_overlap 36140, overlap 36139 CGCCCAGTTCCACCA GCACATAGCGGTCG-CCGG-CCTGGCG CAG CACCAGGGCCGGGCGCTCGCCTTGTGC TTCTCGCTGCGCAAG TERM 40 36661 - 36639 - G 79 -9 -4.16016 | overlap 36614 TCATCGGTGAAGAAA TCCGGCGCGC CGT GCGGGCCGTA GAGCACGGCGATGTC TERM 41 38323 - 38297 - G 74 -2.1 -4.82901 | overlap 38298 GTTCTCGGACAAAAA GCCGTAGCC GGGGTGGAT GGCGCCGGC GCCGGTGGCGCGCGC Pnap_0037 39339 - 38686 - | hypothetical protein Pnap_0038 40070 - 39336 - | hypothetical protein TERM 42 39957 - 39936 - G 70 -7.9 -4.07568 | CCCGGCGTTGTAAAA CAGCGCCGA GACA TTGGCGCCG CCTTGCAGGTCCGTC Pnap_0039 40897 - 40067 - | ABC transporter related TERM 43 40162 - 40196 + g 74 -12.9 -3.30443 | opp_overlap 40186 GGATGCGGTCGAGCA GCTGGCGCTTGAG GCGCAAAAA CTCGGGCGCCAGC TTCATGTCCTGCTCG Pnap_0040 41682 - 40903 - | binding-protein-dependent transport systems inner membrane component TERM 44 41581 - 41563 - G 76 -5.9 -4.56597 | overlap 41565 GGGGCCGGGCAAAAA CACCGGG CTCAC CCCGGCA AAGGCGCTGAGCAGC TERM 45 41579 - 41565 - G 71 -8.5 -3.90048 | overlap 41563 GGCCGGGCAAAAACA CCGGG CTCAC CCCGG CAAAGGCGCTGAGCA TERM 46 41599 - 41584 - G 70 -10.4 -3.54424 | overlap 41585 GCTCACCCCGGCAAA GGCGCT GAGC AGCGCC CAGCCCAGCAGCGGC Pnap_0041 42709 - 41693 - | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein Pnap_0042 43542 - 43159 - | methylglyoxal synthase TERM 47 43495 - 43506 + g 91 -5.8 -5.32882 | CTCCCGGGCGAGCAG GACG ATGT CGTC TTTTTTATGATCGTG Pnap_0043 44605 - 43586 - | TRAP dicarboxylate transporter, DctP subunit TERM 48 44033 - 44018 - G 79 -9 -4.11371 | opp_overlap 44032 GAAGAGTTCGGAAAA CGCCAT CGGA ATGGCG TTGGCGCCCAGCGTC Pnap_0044 45938 - 44646 - | TRAP dicarboxylate transporter, DctM subunit TERM 49 44752 - 44731 - G 81 -7.3 -4.46926 | gap 1, overlap 44732 TAGGTGATGAGAAAA GGGTTGACCC CCT GGATCA-CCC GGTGCAGCGGCATCC TERM 50 45212 - 45229 + g 71 -5.5 -4.25104 | overlap 45213 CCACGGCCGCTTCGG TCGGCGT GAAG ATGCCGG TTTTCATGCCGCCGA TERM 51 45754 - 45744 - G 91 -6.8 -5.31275 | overlap 45745 GGCCAGGATAAAAAA TGGC ACG GCCA GCAGCGGAAAGCTGT TERM 52 45933 - 45911 - G 77 -2.6 -5.00616 | opp_overlap 45915 45920, overlap 45914 45915 TGCCGGCTGAAAAAA CGATGAAAGC GAG GCCTTCGTTG CTCATGGTGTTTACT Pnap_0045 46456 - 45944 - | tripartite ATP-independent periplasmic transporter DctQ TERM 53 46050 - 46037 - G 77 -3.7 -4.82901 | opp_overlap 46038, overlap 46038 46039 CGTGGCGCACAAAAA GGCCG GCAG CGGCA GCAGCGCGGTCGGGT Pnap_0046 46962 - 46453 - | carbohydrate kinase TERM 54 46627 - 46607 - G 79 -8.1 -4.30719 | opp_overlap 46615 46622, overlap 46608 GTGGTCGAGAAGAAA TGCTGCGCG GCG CGCGCCGCC ACCCGGGCCTGCGCC TERM 55 46626 - 46608 - G 70 -11.6 -3.1811 | opp_overlap 46615 46622, overlap 46607 TGGTCGAGAAGAAAT GCTGCGCG GCG CGCGCCGC CACCCGGGCCTGCGC TERM 56 46696 - 46672 - G 77 -13.6 -3.39449 | gap 1 GTCCAGGAACACGAA GCG-CAGGCCG GGCG CGGCCTGGCGC AGGCGCTCGCGGTAG TERM 57 47032 - 47062 + H 78 -11.9 -3.31144 | gap 1 GCCGGGGAACCTTTT TTCC-AGGCCGCCT GCGA GGGCGGCCTAGGGA TTGTCCGGCTGGCGC TERM 58 47252 - 47308 + G 90 -19.5 -2.63079 | gap 2, overlap 47275 47275 CGCGCGCGCTGCGCG GCGAGCGCGCCGTCG-ATCCG-GCGCT GGTCG AGCGCGTGCAGGCGGCGGCGCGCTCGC TGGGTTATGTGCCCG TERM 59 47962 - 47919 - g 78 -15.9 -2.70932 | gap 1, opp_overlap 47925 GTTCTTCTGCAATGA CGACCTGGCGCAG-GGCGCC TTGCT GGCGGCGCTGCGCCTGGGCG TTGCGGTGCCGGAGC Pnap_0047 47101 - 48171 + | periplasmic binding protein/LacI transcriptional regulator Pnap_0048 48364 - 48840 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 60 49398 - 49355 - g 70 -7.2 -4.08692 | overlap 49382 CAAGGCGGGTGAAAA CGGCGTGCTGTATGCCGCCG TGAT CAACGACCTGCACCGCGCCG CCGGCCGCTCGGGCG Pnap_0049 48852 - 50699 + | aldehyde ferredoxin oxidoreductase TERM 61 50726 - 50747 + F 100 -9.3 -5.2166 | opp_overlap 50726 GGAGGGGGAGGAGAA GGGGCGCGC GCAA GTCCGCCCC TTTTTTAAATTGTTG Pnap_0050 50775 - 52064 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pnap_0051 52061 - 52315 + | thiamineS protein TERM 62 52495 - 52535 + G 76 -10.4 -3.84451 | gap 2, opp_overlap 52475 GGCCGGCAGCGCCCC GCGTGCTCGGCAGCGCCCGG ATT CCGCGC-CTGCTG-GTGCGC TTTGCCTTTGCCGGA Pnap_0052 52320 - 52619 + | hypothetical protein TERM 63 53076 - 53114 + G 74 -2.5 -4.89852 | gap 2 CTGATTCCGGCCGAT GTGGTGTTT-TCCAT-GGC GTC GCCGATGGACGAGCACGGC TTTTTCTCGCTGTCG Pnap_0053 52725 - 54020 + | acetyl-CoA hydrolase/transferase Pnap_0054 54110 - 55105 + | hypothetical protein Pnap_0055 55153 - 55944 + | hypothetical protein TERM 64 56008 - 55974 - T 70 -2.8 -4.77036 | opp_overlap 55955 55954 55973 55975, overlap 55975 56006 TTTCATGATGAAAAA GGCTGTTTGCGC AGTCTGTATAA GCGCAAGCAGCT ATATTATTGATAGCA Pnap_0056 58742 - 56052 - | GCN5-related N-acetyltransferase TERM 65 57931 - 57917 - G 86 -7.1 -5.00616 | overlap 57927 57930 TGGCGGCCGAAAAAA GCTCG ACAAA CGAGC GCACGCGCACCGCGC Pnap_0057 59677 - 58751 - | histone deacetylase superfamily protein TERM 66 59341 - 59331 - G 72 -2.4 -4.7497 | CGCACGCAGCAAAAA GCGC TCG GTGC ATCGCCCGTCAGCAC Pnap_0058 61100 - 59940 - | hypothetical protein TERM 67 61137 - 61119 - R 100 -16 -5.53288 | TTGAAGGCAAAAAAA CGCCCGCA AGA TGCGGGCG TCAAGGGTCAGAAAA Pnap_0059 63475 - 61169 - | hypothetical protein TERM 68 61929 - 61954 + g 74 -9.7 -3.85698 | ACGTTGTGCTTGTCG CCCAGCACGGT TGCG ACGGTGTTGGG TTTGTACACCCAGCG TERM 69 63666 - 63632 - R 100 -13.5 -4.87626 | TTTCAATATGAAAAA GCGCCTCAAGCCCAT GTTGA ACGGGCGAGAGGCGC TATGAATAGCGTAGC Pnap_0060 64887 - 63703 - | beta-ketothiolase TERM 70 65119 - 65096 - g 83 -7.6 -4.54477 | GCAAAACCCATAAAA TGTACAAAAC CGTT ATTTTGTACA AAACCCCCATGCACA TERM 71 65287 - 65271 - g 72 -8 -4.13767 | GGCCGCACCCGAAAA GCTTCC CAGCT GGAAGC GCCCGATCCATCCGC Pnap_0061 65095 - 65376 + | prevent-host-death family protein Pnap_0062 65380 - 65799 + | hypothetical protein TERM 72 67028 - 67016 - g 93 -7.7 -5.10208 | CAATGCCAAGAAAAA GAAGC CTG GCTTC CGAAGCGCGACGAGG Pnap_0063 65801 - 67804 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Pnap_0064 67804 - 68469 + | methyltransferase GidB Pnap_0065 68499 - 69125 + | lysine exporter protein LysE/YggA TERM 73 69513 - 69497 - g 76 -9.4 -4.08216 | GGAGCGCCGCGAAAA GCGCCT CAAGC AGGCGC TGGCCAAGGTGGACA Pnap_0066 69180 - 69944 + | cobyrinic acid a,c-diamide synthase Pnap_0067 70070 - 70612 + | hypothetical protein Pnap_0068 70682 - 71617 + | parB-like partition proteins Pnap_0069 73081 - 71660 - | FAD linked oxidase domain-containing protein TERM 74 72033 - 72047 + g 74 -12.8 -3.2794 | opp_overlap 72032 72031 GTGTCGGTCGAAATC GCCCGG CAG CCGGGC TTGCTCTGGATGGCC TERM 75 73239 - 73250 + H 74 -7.2 -4.21936 | ACCTTGCAACTTGCC GCGC CCAG GCGC TTTTACCCTTATGGC Pnap_0070 73261 - 73854 + | ATP--cobalamin adenosyltransferase Pnap_0071 74817 - 73873 - | LysR family transcriptional regulator TERM 76 74547 - 74571 + g 81 -4.2 -5.10029 | gap 1, opp_overlap 74533 ACAGCAGGCCGTTTT GCTGCGCCATG TATT CCTGGC-CGGC TTTTTTCAGGTTGCT Pnap_0072 75176 - 74868 - | hypothetical protein TERM 77 75173 - 75140 - G 70 -12 -3.14132 | overlap 75144 75169 GTTGCCCGGCAGCAA GTAACTTTCTTTTG CTTCGC CAAAAGAAAGTCAC CAAAGAAAAGGCGAC TERM 78 75204 - 75183 - R 77 -4.4 -4.9448 | gap 1, overlap 75169 75184 AGTCACCAAAGAAAA GGCGACCCG CAGTC CGAGTC-CC TACGCTTCGCTTCGG TERM 79 75254 - 75243 - R 79 -7.2 -4.4009 | overlap 75244 CGCTACGCCACAAAA GCGG GGGT CCGC GCAAACTCGCTGCGC TERM 80 75632 - 75609 - R 95 -8.1 -4.99947 | overlap 75611 GCGAAGCAAAGAAAA GTGAGTCGC TGCCGG GCGACTCCC GGCCAGCCCAACCAC Pnap_0073 77220 - 75670 - | Acetyl-CoA hydrolase TERM 81 76732 - 76750 + g 71 -8.8 -3.9461 | CAGGATGATCTGGTC GGCCTGGT CCA GCCAGGTC TTGTTGTTGCCGACC TERM 82 78256 - 78215 - g 74 -14.3 -2.62184 | gap 1 TGCTGCTGCACACCA GCGGCCAGGGC-GGCCTGCG CCT CACGGGCCAGCTCCAGCCGC GCCATATCGAGGTGG TERM 83 78741 - 78690 - g 100 -23.6 -3.28712 | CGGTCCGCTGGACAA GGTCCAGGTGTCGGTGCCGGCCAG CGCC CTGGCCGGCGCCGCCGCCGGAACC GCCGTGCTGCCGGGC Pnap_0074 77560 - 78861 + | hypothetical protein TERM 84 79261 - 79240 - g 76 -9.5 -4.00532 | gap 1, overlap 79244 CGCTGAAAGAGGAAA TCCAGGTGCG CGC CG-ACCTGGA GCGCCAGCTGGCCGC Pnap_0075 78921 - 79361 + | hypothetical protein TERM 85 79378 - 79405 + T 100 -12.6 -4.68209 | opp_overlap 79365 CAGCCGCCGGACCGG CCGGCGCATGCG CATG CGCTTGAGCCGG TTTATTTCTTGCGGT Pnap_0076 80693 - 79407 - | uracil-xanthine permease TERM 86 80508 - 80484 - G 83 -5 -5.0538 | gap 1 GGTGACGGCAAAAAA GATCAGCGTGC CGAT GC-CGCTCATC AAGATGGCAATGTTG TERM 87 80651 - 80665 + g 86 -7.1 -5.09225 | overlap 80642 TGACCCCGCCCTGCC GCAGC ACCGC GCTGC TTTTTTCCGTCCAGT TERM 88 80760 - 80738 - R 83 -11.9 -3.71917 | opp_overlap 80748 ATGCTAAAGGCTAAA GGGCGCGCG GCGGG CGGGCGCCC GTTCAATGCATCAGT Pnap_0077 81925 - 80771 - | twitching motility protein TERM 89 81162 - 81147 - G 78 -3.2 -5.00616 | overlap 81149 GTTTCCGGGAAAAAA TTCAGC ACGC GCTGGA TGGCCTGGTTGGCAT TERM 90 82041 - 82073 + H 81 -12.8 -3.07222 | opp_overlap 82048, overlap 82038 82045 82051 GGGAGGGATAGCGGG CCAAGCACAACGGT TCGAT GCCGTTTTGCTTGG TGATTTCTGCTTCAT Pnap_0078 82107 - 82568 + | putative transposase, IS891/IS1136/IS1341 TERM 91 83197 - 83150 - g 100 -26.6 -3.69354 | gap 1, overlap 83190 GCGGAGAATCGCAAA TCTCAGGCGTTTTCAGCGTGGCC TGT GGCCACGCTGAAAACGCC-GACA TCAACGCCGCACAGG TERM 92 83261 - 83239 - g 76 -10.5 -3.82604 | CGAGCGAAGGAACAA TGGGCCGCG GGGCA CGCGGCACA GGCTGGAGAATCTTC Pnap_0079 82622 - 83347 + | IS605 family transposase OrfB TERM 93 84656 - 84616 - g 78 -5.3 -4.72846 | gap 2 CCACAGACCGAAAAA GCCATCGCCGGCGACCGCG TGCGG CCCGG-C-CCGGTGGTGGC GCCAGTCAAGGGCAT Pnap_0080 83455 - 84699 + | RND family efflux transporter MFP subunit TERM 94 85183 - 85150 - g 81 -13.1 -3.82084 | gap 1, overlap 85152 CGGCAACAGCAACAA GAGCGTCGCGCTGCTC GGC GTGCAGCCCGACGC-C TACCGGCGCGTGGTG TERM 95 85182 - 85152 - g 89 -16.8 -3.49169 | overlap 85150 GCAACAGCAACAAGA GCGTCGCGCTGCTC GGC GTGCAGCCCGACGC CTACCGGCGCGTGGT Pnap_0081 84719 - 85981 + | hypothetical protein Pnap_0082 86903 - 86106 - | hypothetical protein TERM 96 86548 - 86530 - G 72 -4.5 -4.56597 | opp_overlap 86547 GTCTGGTTGCAAAAA GCCTCGA TCGCT CCGAAGC TGTTGAATGCAACCG Pnap_0084 87552 - 87908 + | hypothetical protein Pnap_0085 87914 - 88234 + | putative transcriptional regulator Pnap_0086 88241 - 88936 + | ABC transporter related Pnap_0087 89356 - 89646 + | hypothetical protein Pnap_0088 90212 - 89793 - | hypothetical protein Pnap_0089 92018 - 90501 - | adenylate cyclase Pnap_0090 93173 - 92109 - | hypothetical protein TERM 97 93961 - 93940 - g 100 -5.7 -5.40072 | opp_overlap 93940 93943 93944 93960 GCTGGCGGAAAAAAA CCGGCAGGC GGAA ACCCGTCGG CTTTACAGCCTGTTT TERM 98 94986 - 94963 - g 74 -5.2 -4.57837 | gap 1, overlap 94965 ACAGGCGGCCAAAAA CTGGCGGCACA GCC TG-GCCACCGG CGAACCCTACGAAAT Pnap_0091 93497 - 96289 + | PAS/PAC sensor hybrid histidine kinase Pnap_0092 96853 - 96335 - | flavin reductase domain-containing protein TERM 99 96398 - 96374 - G 71 -9.1 -3.72576 | overlap 96360 96359 96376 CCTGCCGCCATGAAA CAGCAGCGGCG CGG CGCCGGCGCGG TGGCTGCAGCGCTCG TERM 100 96891 - 96911 + r 73 -5.3 -4.56597 | opp_overlap 96875, overlap 96886 96884 CCTCCGGTGCGCGCC GGCTGCG GGGCTTG CGCTGCC TTTTTCCGGCGCGGC Pnap_0093 97262 - 96966 - | hypothetical protein TERM 101 97331 - 97311 - R 74 -7.6 -4.09685 | TGTCAGCGTGGAAAA GCATTCTC TGTAG GAGAACGC AACCAGCGCGACAAG Pnap_0094 98752 - 97385 - | D-amino-acid dehydrogenase TERM 102 97483 - 97443 - G 74 -10.4 -3.76413 | gap 1, overlap 97436 CCGTAAAAGCCGAAA GCCATGGCCGGCACTTCGC CGCT GAGGAGTTC-GGCCATGGC CTTGCCCGAACCCGC TERM 103 98525 - 98468 - G 74 -4.8 -4.57569 | overlap 98469 GCACTGCGCCAAAAA CTGCAGGCCCCAGC-GCCATTGCTGCCA GCCT TCGCCA-AACGGCAGCCGGGGCCTGAAC AGCAGCGGCGCATCG TERM 104 99380 - 99418 + G 74 -10.1 -3.74693 | gap 1, opp_overlap 99376 GCGATGGAATACGTG GCCGTCGCCACCCCCGCG CTGG CGCGGGAGCGGCTG-GGC TTTGATGCGCTGACG Pnap_0095 98864 - 99778 + | chromosome replication initiation inhibitor protein TERM 105 99920 - 99946 + G 71 -8.6 -3.83042 | overlap 99909 99928 TGCGCGCCGCAACCG GCATTGCTGCCG CCA TGGCCGCCATGC TTGCTTTTTCGCTGC TERM 106 99928 - 99950 + G 72 -4 -4.65895 | overlap 99920 GCAACCGGCATTGCT GCCGCCATGG CCG CCATGCTTGC TTTTTCGCTGCCAGC Pnap_0096 99880 - 101130 + | extracellular ligand-binding receptor TERM 107 101363 - 101347 - g 93 -8 -5.00616 | overlap 101350 101354 CTCGGCTGCAAAAAA CCAGCA AGCCG TGCTGG CGCTGGCCAGGGCCA TERM 108 102070 - 102120 + G 76 -8.9 -4.14243 | gap 2, overlap 102042 102041 TGTCCTTACCGCCGC GCCG-CGCGCCTTGCTGC-TGGC CGATCTT GCCGCGCTGCTGGGCGTGACGGC TTTTGGCATGGCCTG TERM 109 103104 - 103118 + G 76 -10 -3.85698 | GCGATGGCGAGGTGC TGGCGA CCT TCGCCA TTTATCGCCGCGCGC TERM 110 104878 - 104890 + G 71 -4.7 -4.41494 | overlap 104875 GGAGTCGGTGCAAGG CGAGG GCG CCACG TTTTACTTCACGCTG Pnap_0097 101249 - 104923 + | multi-sensor signal transduction histidine kinase Pnap_0098 105465 - 105043 - | UspA domain-containing protein Pnap_0099 106497 - 105547 - | metallophosphoesterase TERM 111 105842 - 105818 - G 100 -19.3 -4.07568 | opp_overlap 105824 GTCGGGCCGTCAAAA GGCTGCGCCAG CGC CCGGCGCAGCC AGGCCTGGCTTTTCA TERM 112 105824 - 105851 + g 93 -13.4 -4.17491 | gap 1, opp_overlap 105818, overlap 105845 CCGTCAAAAGGCTGC GCCAGCGCCCGGC GCA GCCAGGC-CTGGC TTTTCAGGCTTTCCT TERM 113 106493 - 106513 + g 73 -11.1 -3.61268 | opp_overlap 106489 106493 GCTGGCATGAATGCA GCCATGCAG GAT CGGCATGGC TTTGCGCCTTGCCTG TERM 114 106582 - 106593 + r 83 -5.8 -4.87807 | opp_overlap 106582 TCGCAATTTTTAACA CTGC CCAG GCAG TTTTTCCTATGTTCC TERM 115 106761 - 106779 + r 86 -10.3 -4.07687 | GCCGCCCGCGCCTTC CTCAGCG TCGTT CGCTGAG TTTTGGGCCGGGCCT Pnap_0100 107771 - 106815 - | LysR family transcriptional regulator TERM 116 106999 - 106987 - G 71 -5.5 -4.38712 | overlap 106988 106989 GTCACCCGTACAAAA TGCCG TGG CAGCA CGGTCAGCAGGTTGG TERM 117 107265 - 107250 - G 81 -3.9 -5.06414 | opp_overlap 107250 CCGCTGGAAGAAAAA CGGCA TCGCCT CGCCG TTCTGCTCCTTGGCC TERM 118 108052 - 108078 + G 74 -14.4 -2.60079 | overlap 108048 CGCTGCTGCTGGGTT CCGCCATGGCGG CCG CCGTCATGGCCG TGGCTTATGAAGTCA Pnap_0101 107919 - 108440 + | hypothetical protein TERM 119 108479 - 108459 - T 76 -11.8 -3.15544 | GTCCATCGCCAGGAA GCCCCGCC AGCCA GGCGGAGC GCCATGAAAAAAAGC TERM 120 108509 - 108493 - T 100 -12.3 -5.52384 | opp_overlap 108493 GCGCCATGAAAAAAA GCCACCT GTC AGGTGGC TTTTTTTGTGTCCGG TERM 121 108493 - 108509 + T 100 -12.3 -5.71712 | opp_overlap 108493 GCGCCATGAAAAAAA GCCACCT GTC AGGTGGC TTTTTTTGTGTCCGG Pnap_0102 110420 - 108552 - | phosphoenolpyruvate carboxykinase TERM 122 109170 - 109191 + g 76 -11.5 -3.71848 | GCCTTTCGGGTCGTC CCAGGCGCT GTCG AGCGCCGGG TTGTTGGTAGCGGCG TERM 123 110042 - 110089 + g 100 -18.6 -3.68619 | opp_overlap 110027 110026 110039 110069 GCACCACATACATGG TGCG-GCCGCGCATGCAGCCGT CAAACA GCGGCTGCA-GCGTGGCGCGCA TTTCGCTCGGTTCCA TERM 124 110093 - 110127 + g 77 -2.1 -5.00196 | gap 2, overlap 110116 GCGTGGCGCGCATTT CGCTCGGTTCCATCCAG TTG TTGG-TCGGGCCG-GCG TTTTCTTCTTTGGCC Pnap_0103 110683 - 110417 - | hypothetical protein Pnap_0104 112474 - 111104 - | hypothetical protein TERM 125 111313 - 111295 - G 71 -8.8 -3.90588 | opp_overlap 111295 111291 111287 CATCTCTGAACCAAA TCGTAGGC GCG GCCTCCGA TTGGTGTACTTCCTT Pnap_0105 112533 - 113192 + | two component LuxR family transcriptional regulator TERM 126 113658 - 113622 - g 78 -12.1 -3.73402 | opp_overlap 113620 113638 ACAGCGTTGAGCAAA CCTACCGCCTGCTTCAG GCC CTGGCGCTGGCGGTCGG CCTGTGCTGGGGCAT TERM 127 113883 - 113906 + G 86 -8.2 -4.56597 | opp_overlap 113902, overlap 113871 113885 TGCCGGTTGCGCTGC TGCTGTTGCT GCTC AGCAACGGTA TTTTTGCGCACAACA TERM 128 113885 - 113904 + G 71 -8.6 -3.90048 | opp_overlap 113902, overlap 113871 113883 CCGGTTGCGCTGCTG CTGTTGCT GCTC AGCAACGG TATTTTTGCGCACAA Pnap_0106 113225 - 115198 + | integral membrane sensor hybrid histidine kinase Pnap_0107 115898 - 115233 - | ABC transporter related TERM 129 115967 - 115951 - R 100 -12.3 -5.4505 | opp_overlap 115951 CTTGCCAACAAAAAA GTCCGCA CGC TGCGGAC TTTTTTGGGCTGCCA TERM 130 115951 - 115967 + r 100 -12.3 -5.0538 | opp_overlap 115951 CTTGCCAACAAAAAA GTCCGCA CGC TGCGGAC TTTTTTGGGCTGCCA Pnap_0108 116251 - 116006 - | hypothetical protein TERM 131 116536 - 116564 + G 86 -18.1 -2.52896 | opp_overlap 116525 116526 TGAAGTCGGCCGCCG TGCCGGCGAAGGC GCG GCCATCGCCGGCG TGGCTTCGGCGGTCG Pnap_0109 116291 - 116764 + | hypothetical protein Pnap_0110 116771 - 117349 + | MOSC domain-containing protein Pnap_0111 118578 - 117376 - | threonine dehydratase TERM 132 118408 - 118450 + g 76 -8.5 -4.14392 | overlap 118393 118409 GAGCTGCGCCAGCTT GTTGCAG-GCGCCGCGCTCCT TGA AGGA-CGCGGTGTACTGCAGG TTTTCGAACTTCAGG TERM 133 118811 - 118824 + G 71 -8.1 -3.86346 | CCTTGTCGAGCATCC GCAGC AGTG GCTGC TTTCTCCCGGCCTGA TERM 134 118970 - 119000 + G 72 -4.5 -4.65895 | gap 1, overlap 118971 118972 CCGGCACCTGGTGTG GCCGCTGCCGGCGC TGCA GCGCCTGC-GCGAA TTTTTGAATCGCCGC TERM 135 119249 - 119237 - g 91 -3.3 -5.40072 | GCTGGTCGAAAAAAA CATCG AGT CGCTG GCCAGCCTGCTGCAG TERM 136 119588 - 119623 + G 71 -6 -4.30014 | gap 1, overlap 119589 GATGGCGGTCTTCAC CCGGCCGGCCACGCG CAGCCGC CTCG-GGCTGGCCGA TTTTGCCTTCGTGGA TERM 137 120240 - 120253 + G 76 -8.1 -4.11484 | overlap 120225 ACGCCGGCGCAGATT CGCAC GGCG GTGCG TTTTGCCCGCTTGGC TERM 138 120554 - 120508 - g 78 -10 -4.08767 | gap 1, opp_overlap 120516 TGGAGGCGCTCAAAA GCCGGGGCCACGGCAGCCTGT GCTTCT ACGGCCCGCC-CGGCACCGGC AAGACCGCGCTGGCC Pnap_0112 118782 - 121151 + | ATPase central domain-containing protein Pnap_0113 121574 - 121873 + | hypothetical protein TERM 139 121985 - 121948 - T 78 -2.6 -5.15634 | gap 1, opp_overlap 121936 121948, overlap 121951 GATGCTATTAAAAAA GTAGCTGCTTGCGCCCG TCCAT CCTGCGCAAG-AGCCGC TTTTCATCATGAATT Pnap_0114 123968 - 122049 - | ATP-dependent DNA helicase RecQ TERM 140 122935 - 122947 + g 74 -10.5 -3.80573 | GGCAAGCCGTCGCGT CCGGC GCG GCCGG TTTCCTGGTAGTAGC TERM 141 123734 - 123747 + g 76 -9.5 -4.07885 | opp_overlap 123725, overlap 123704 AGATCACGATGGTCA CGCCG TGGC CGGCG TTTTGCCGGGCGATG TERM 142 123918 - 123887 - G 72 -2.1 -4.68593 | gap 1, opp_overlap 123900, overlap 123888 123899 CGGAGTAGCCAAAAA CCTGGCCAAGCACG TCCAG CG-GCGTGGGCTGG TCTGAAGGGGCTGAA TERM 143 124861 - 124836 - g 70 -10.5 -3.55203 | gap 1, opp_overlap 124853 124854, overlap 124825 124838 124839 AAAACTCCGGTGAAA GATTGCCGCTGA TCA TCAGCGGCA-CC GTGACCGATGCCTCG TERM 144 124860 - 124838 - g 72 -12 -3.34894 | opp_overlap 124853 124854, overlap 124836 124825 124839 AACTCCGGTGAAAGA TTGCCGCTGA TCA TCAGCGGCAC CGTGACCGATGCCTC TERM 145 124859 - 124839 - g 77 -15.5 -2.60615 | opp_overlap 124853 124854, overlap 124838 124836 124825 ACTCCGGTGAAAGAT TGCCGCTGA TCA TCAGCGGCA CCGTGACCGATGCCT Pnap_0115 124205 - 125260 + | homocysteine S-methyltransferase Pnap_0116 125872 - 125288 - | cyclic nucleotide-binding protein TERM 146 126752 - 126809 + G 77 -4.2 -4.82901 | gap 3, opp_overlap 126782, overlap 126737 126755 GTCGGGCGGCGTGTC CAACGTGTCGTTCAGCTTTCGCGGCAACG ACC CGGTG-CGCGAA-GC-GATTCACACGGTG TTTTTGTACCACGCG TERM 147 127068 - 127042 - g 71 -13.7 -2.59421 | gap 1, overlap 127009 127041 127037 127034 GCAAGAAGTACGAAT GGCGCGCGCTGC CGAT AC-GCGCGCGCC TGTCGCATGCGCTGG TERM 148 128115 - 128091 - g 71 -12.8 -3.05715 | AAGCGCCTGATCGAA GGCCGCTGGC TCACG GCCAGCGGCG TGATGGCGCTGCTGC TERM 149 128263 - 128230 - g 84 -4.4 -5.13473 | gap 1, opp_overlap 128261, overlap 128232 AGCAGACCGAAAAAA CGGCGGTCGATGGCG TGATG CGCC-CCAGCCGCTG CCTGGCCGATTTTGT Pnap_0117 126045 - 128864 + | methionine synthase TERM 150 128899 - 128884 - f 71 -4.6 -4.56597 | opp_overlap 128874 GGCGTCTCGGAAAAA TCCGGG TGGT CTCGGA AAAACTCTCGCTCAG TERM 151 129896 - 129930 + G 95 -19.2 -3.53012 | TCGATACCGCCGCAG GCACGGTGGCGCGCGT GCT GCGCGTGCCGCCGGGC TTTGCCGACGAACAC Pnap_0118 129037 - 130506 + | hypothetical protein Pnap_0119 132136 - 130589 - | Mg chelatase, subunit ChlI TERM 152 132420 - 132449 + H 89 -13.6 -3.75024 | gap 1, overlap 132424 AAAAACCCTGTAATG CGGCGGCAGCGGC ATGTG GCCGCTGCC-CTG TTATTCATCCTGGAG TERM 153 132424 - 132446 + H 89 -16.3 -2.66963 | overlap 132420 ACCCTGTAATGCGGC GGCAGCGGC ATGTG GCCGCTGCC CTGTTATTCATCCTG Pnap_0120 132475 - 132813 + | nitrogen regulatory protein P-II TERM 154 133970 - 134021 + G 71 -9.3 -3.73072 | overlap 133975 133976 134009 134011 TCGCTGGCCTGGTGG CCATCACGCC-GGCCGCCGGCAACG TCGG CATCGCCGGTGGCCTGGCGAT-TGG TTTCATCGCCGGCTT TERM 155 133975 - 134017 + G 77 -13.3 -3.56704 | gap 1, overlap 133970 133976 134009 134011 GGCCTGGTGGCCATC ACGCC-GGCCGCCGGCAACG TCGG CATCGCCGGTGGCCTGGCGA TTGGTTTCATCGCCG TERM 156 133976 - 134016 + G 81 -16.8 -2.73701 | gap 1, overlap 133975 133970 134009 134011 GCCTGGTGGCCATCA CGCC-GGCCGCCGGCAACG TCGG CATCGCCGGTGGCCTGGCG ATTGGTTTCATCGCC Pnap_0121 132847 - 134412 + | ammonium transporter TERM 157 134469 - 134497 + F 100 -18.2 -6.07627 | opp_overlap 134466 TTTTTGAGGGAAGTT CAGCCCGCTGGT GCCAA GCCAGCGGGCTG TTTTTTTTTGCCGCT TERM 158 134925 - 134945 + G 71 -9.6 -3.6993 | overlap 134924 CCATTTACGAGCCGC GCGGCGCC GCCCG GGCGCAGC TGTTTTCGCTCGATG Pnap_0122 134558 - 135484 + | SMP-30/gluconolaconase/LRE domain-containing protein TERM 159 135485 - 135499 + F 73 -5.6 -4.65895 | overlap 135486 TTTTTCAGGGATTGA GCTGGC CTG GCCAGG TTTTTAAGTAAAAAA TERM 160 135651 - 135633 - f 95 -6 -5.40072 | overlap 135634 135635 TGGGCTGCAAAAAAA CCGAACAC GCC GTGTTCAA AAAAATCAAAACCCC TERM 161 135678 - 135663 - f 77 -4.6 -4.94243 | TCAAAAAAATCAAAA CCCCTT AGCA ATGGGG ACGCGTACCATTCCT glcE 135697 - 136845 + | glycolate oxidase FAD binding subunit TERM 162 137052 - 137066 + G 73 -12.8 -3.2048 | overlap 137045 ATGCGCCTGGTGCTG GGCGCC ATC GGCGCC TTGCTGGCCTTTACC Pnap_0124 136854 - 137618 + | hypothetical protein glcF 137627 - 138874 + | glycolate oxidase iron-sulfur subunit TERM 163 139057 - 139030 - f 83 -9.8 -4.1673 | overlap 139033 GAAGTCCTCAATAAA GAGGCGGCGAAC GGGC GTTCACCGCACC TGCCGGTACAGCAGC TERM 164 139054 - 139033 - f 72 -12.3 -2.80244 | overlap 139030 GTCCTCAATAAAGAG GCGGCGAAC GGGC GTTCACCGC ACCTGCCGGTACAGC TERM 165 139377 - 139322 - g 89 -11.1 -4.26903 | gap 1, overlap 139374 CTCATCGCAGCAAAA TGCCGAGGCCGGCCGCCAGGGCCA GAAGGGCGA TGACCGTGGCGGCCAGCAA-GGCA GCAGCGGCGGCTCGG Pnap_0126 139116 - 139478 + | hypothetical protein TERM 166 139519 - 139535 + T 100 -11.5 -5.47821 | GCGCCTTCATCCAGG GGCGGCT TCA GGCCGCC TTTTTTTGCCTGAAT Pnap_0127 140629 - 139586 - | poly (3-hydroxybutyrate) depolymerase TERM 167 139942 - 139910 - G 82 -11.3 -4.0641 | gap 1, opp_overlap 139899, overlap 139914 GGGCACGTACACAAA GCCAGTGCCAGCCA TGCCGG TGGC-GGCGCTGGC ATAGGTGCGCTGGTT Pnap_0128 141229 - 140744 - | glutathione peroxidase TERM 168 141317 - 141303 - R 83 -12.8 -3.18268 | overlap 141301 141300 CCCCAAGGAAAATTA GCCCCC TCG GGGGGC AGCGCATTACGCGAA Pnap_0129 142260 - 141352 - | hypothetical protein Pnap_0130 143540 - 142260 - | hypothetical protein Pnap_0131 143732 - 144829 + | alanine racemase TERM 169 145352 - 145369 + G 77 -4.1 -4.91511 | gap 1 AGGCGGCGGTGGTCG TGGTG-CC GGT GGTCGCCA TTTTTCTGATCGGCT Pnap_0132 144826 - 145665 + | hypothetical protein Pnap_0133 145719 - 146114 + | DNA polymerase beta subunit TERM 170 146264 - 146237 - g 84 -16.4 -3.04144 | gap 1 CGGCCATCCTGAACA TCCAGCG-CGCCT GCG AGGCGGCGCTGGA CATGGGCCAGCACCT Pnap_0134 146104 - 146532 + | hypothetical protein Pnap_0135 147503 - 146529 - | 2-dehydropantoate 2-reductase Pnap_0136 148684 - 147617 - | hypothetical protein TERM 171 148538 - 148491 - G 78 -10.5 -4.07568 | gap 2, overlap 148492 CCGCCCGGGGCAAAA CCGGCGACGACCCGGGCGCTGTC GATG GCCTGCGCCCAAGCC-T-GCCGG CCGATGCCGGCCAGC Pnap_0137 149176 - 148739 - | 5-carboxymethyl-2-hydroxymuconate isomerase TERM 172 148863 - 148837 - G 100 -10.1 -5.252 | gap 1 CATGTTCAGAAAAAA CCTGCGCC-AGG TGCG CCTTGGCGCTGG CCAGCACCGCGTCGC TERM 173 149668 - 149648 - g 71 -9.6 -3.73224 | TGACCGGCGAGGAAA GCGGCGCG CAGGT CGCGCTGC GCTCGCGCCGGCTGG TERM 174 149750 - 149720 - g 70 -10.4 -3.55563 | AGGTGATGGCCGAAA TCCAGCTCGACAAG ATT CTCGCCACGCTGGA GGTCACGCAGCCGGC Pnap_0138 149206 - 150633 + | DNA repair protein RadA Pnap_0139 150668 - 151450 + | metallophosphoesterase TERM 175 151428 - 151450 + F 77 -7.7 -4.30844 | CACTGGCGACCGGCT TCATGCCGC GCCTG GCAGCATGA TTTTGCTACTAAAAT TERM 176 151532 - 151521 - f 91 -7.2 -4.92363 | overlap 151522 AAACATGCATAAAAA CGGC TCCG GCCG GTCATGCCAAGCCGC Pnap_0140 151598 - 152002 + | hypothetical protein Pnap_0141 152521 - 152045 - | putative transposase of insertion sequence ISRm10-1 Pnap_0142 152999 - 152541 - | hypothetical protein Pnap_0143 153602 - 153075 - | spore coat U domain-containing protein Pnap_0144 155980 - 153605 - | fimbrial biogenesis outer membrane usher protein TERM 177 153961 - 153980 + g 76 -7.8 -4.25104 | CGAGCGGCAGGTCCA CCGGGTCG ATCT CGATCTGG TTTTGCTGCCACGGC TERM 178 155538 - 155577 + g 76 -10.6 -3.89614 | gap 1, overlap 155539 ACCGACAGGTCGTAG TTGAGCAGCACGCCGGGCT GCG GGCGCGGCG-GCGGCTCGG TTTGTGCGCCTTGCA TERM 179 156188 - 156172 - R 83 -7.9 -4.60487 | overlap 156173 CATCACTTTGAAAAA GGCCAGC CAC GCTGGCA TGGGAAGGCAACCCA TERM 180 156187 - 156173 - R 75 -11.4 -3.3581 | overlap 156172 ATCACTTTGAAAAAG GCCAGC CAC GCTGGC ATGGGAAGGCAACCC Pnap_0145 157020 - 156232 - | P pilus assembly protein chaperone PapD-like protein Pnap_0146 157703 - 157017 - | spore coat U domain-containing protein Pnap_0147 158095 - 159036 + | branched-chain amino acid aminotransferase Pnap_0148 159071 - 159280 + | hypothetical protein TERM 181 159792 - 159808 + G 76 -5.7 -4.63932 | opp_overlap 159793, overlap 159793 AGAACCCCAAGAACA AGCCGCC CAT GGTGGCG TTTTATTCGGCCCTG Pnap_0149 159398 - 160423 + | lipopolysaccharide heptosyltransferase II TERM 182 160449 - 160466 + T 84 -12.7 -3.3197 | opp_overlap 160449 ATTTGCCAAAAAAAA GGCCACC TTGC GGTGGCC TTGTAAAAGTCCTCT TERM 183 160466 - 160449 - T 100 -12.7 -5.75945 | opp_overlap 160449 ATTTGCCAAAAAAAA GGCCACC TTGC GGTGGCC TTGTAAAAGTCCTCT Pnap_0150 161892 - 160648 - | integral membrane sensor signal transduction histidine kinase Pnap_0151 162625 - 161900 - | two component transcriptional regulator Pnap_0152 164186 - 162786 - | major facilitator superfamily transporter TERM 184 163331 - 163278 - G 72 -4 -4.56358 | gap 3, overlap 163280 163282 CATATCGACATAAAA CGGATTCGCCATGATGCC-CATCACCA CGT CGCTGATGCGGTA-CATGGCG-ATCAG CGCCAGGATCAGCAG TERM 185 163397 - 163419 + g 73 -3.3 -4.72272 | ACGGCTCGATCAGCG CGCCCTTGA GCCAG TCGGCGGCG TTTTTGCTGGGCGGC TERM 186 164957 - 164899 - g 77 -13.8 -3.28712 | opp_overlap 164946 164947, overlap 164854 164900 164932 GCGCGGCGGCTACAA CCCGCAG-GCCGCCGTCAGCCTGTGGCA AAAAA TGGCGCAGGCCGGCGGCGGCGCTG-GCG GGCCGAATTTTCTGT TERM 187 164958 - 164900 - g 90 -19.6 -2.57132 | gap 2, opp_overlap 164946 164947, overlap 164854 164899 164932 CGCGGCGGCTACAAC CCGC-AG-GCCGCCGTCAGCCTGTGGCA AAAAA TGGCGCAGGCCGGCGGCGGCGCTGGCGG GCCGAATTTTCTGTC Pnap_0153 164219 - 165061 + | peptidase M48, Ste24p TERM 188 165084 - 165120 + T 74 -11 -3.28712 | gap 2, opp_overlap 165078 165082 CTGCGCAAAGCGATG CTGA-CAGCGCC-GCC AGGCTTG GGCGGGCGCTGGTCAG TTCTGCGCAGGGAAC Pnap_0154 165452 - 165117 - | hypothetical protein Pnap_0155 166067 - 165477 - | hypothetical protein TERM 189 166119 - 166073 - R 76 -12.6 -2.8474 | opp_overlap 166085 166086 166087, overlap 166085 166087 TTTTATTCATAATGA TCTCCTTAAAAACAGGAAAGGA GCG TCCTTTCCCATTTTTAAAAAGT ATTAATTAATTAATG TERM 190 166085 - 166107 + r 71 -4.8 -4.59511 | opp_overlap 166073 166085 166087, overlap 166086 166087 TGATCTCCTTAAAAA CAGGAAAGGA GCG TCCTTTCCCA TTTTTAAAAAGTATT TERM 191 166107 - 166085 - R 89 -9.2 -4.57569 | opp_overlap 166085 166086 166087, overlap 166073 166087 TGATCTCCTTAAAAA CAGGAAAGGA GCG TCCTTTCCCA TTTTTAAAAAGTATT TERM 192 166087 - 166105 + r 72 -11.8 -2.60508 | opp_overlap 166085 166073 166087, overlap 166086 166085 ATCTCCTTAAAAACA GGAAAGGA GCG TCCTTTCC CATTTTTAAAAAGTA TERM 193 166105 - 166087 - R 86 -11.8 -3.90316 | opp_overlap 166087 166086 166085, overlap 166085 166073 ATCTCCTTAAAAACA GGAAAGGA GCG TCCTTTCC CATTTTTAAAAAGTA Pnap_0156 166545 - 166129 - | putative glycin-rich signal peptide protein Pnap_0157 166550 - 166822 + | hypothetical protein TERM 194 166994 - 167017 + G 100 -11.2 -4.80882 | opp_overlap 166993 166992 167012 AAATTAATTAACATC TTCCTGTTTA TGAA TAAACAGGAA TTTTTACTGTGCGCT Pnap_0158 166913 - 167155 + | hypothetical protein TERM 195 167561 - 167544 - f 89 -3.3 -5.47218 | TCGCAGGTAAAAAAA GACCCAA TGAG CCGGGCC GGGCCGCTGATACGC Pnap_0159 167736 - 168044 + | hypothetical protein TERM 196 168086 - 168047 - T 79 -11.5 -3.65351 | gap 1, opp_overlap 168047 168050, overlap 168050 GGATGGTGAGTGAAA TAG-GCCTTCCGCGCACG GCTGG CATGCGCGGACAGCTCTA TTTTTGATAGCGCCA TERM 197 168047 - 168086 + T 86 -7.9 -4.72272 | gap 1, opp_overlap 168047 168050, overlap 168050 GGATGGTGAGTGAAA TAGGCCT-TCCGCGCACG GCTGG CATGCGCGGACAGCTCTA TTTTTGATAGCGCCA TERM 198 168082 - 168050 - T 78 -13.4 -2.64144 | opp_overlap 168050 168047, overlap 168047 TGGTGAGTGAAATAG GCCTTCCGCGCACG GCTGG CATGCGCGGACAGC TCTATTTTTGATAGC Pnap_0160 169476 - 168106 - | aldehyde dehydrogenase TERM 199 168613 - 168630 + g 76 -5.6 -4.56597 | overlap 168596 GCCGGGCTGGAAGTT TTCCAG CGCCGC CTGGAA TTTTTCCAGGAAACG TERM 200 169375 - 169393 + g 72 -4.5 -4.64676 | opp_overlap 169375, overlap 169353 169350 GTCGCTTTCAAAGCA GCTGGCG GCCTG CGTTAGC TTTTCTTCGAGCTGC TERM 201 169581 - 169564 - R 80 -5.6 -4.90266 | TTTATCAATCAAAAA GTGCTT TTGCGC AAGCAC CACGGGCGCAGGCAG Pnap_0161 170742 - 169633 - | NADH:flavin oxidoreductase/NADH oxidase TERM 202 170373 - 170347 - G 70 -12.2 -3.21099 | opp_overlap 170347, overlap 170370 GGGCTGGATCACGAA GCACTGGGCGCC TTT GGCAACCAGCGC CGAAGGGGCCACCGG TERM 203 170386 - 170398 + g 85 -10.5 -4.25283 | opp_overlap 170370 CGCCGAAGGGGCCAC CGGCG CCG CGCCG TTTTCCTGCAGCAGT TERM 204 170842 - 170822 - R 95 -6.7 -5.40072 | overlap 170823 GCTGGGTTAAAAAAA TCCGCCGGC AAG GGCGGGGGA GGAAGGGAAAGGGTG Pnap_0162 171479 - 170874 - | TetR family transcriptional regulator Pnap_0163 171564 - 172418 + | protein of unknown function RIO1 Pnap_0164 174193 - 172430 - | ABC transporter related TERM 205 173103 - 173091 - G 71 -4.8 -4.431 | GACGGACCGACAAAA GCGA TGGTG TCGC CCAGACCGGCGGAAA TERM 206 173723 - 173701 - G 76 -13.4 -3.17051 | overlap 173699 CGCCGACCAGGAACA CCGGCACCAG CAG CCAGTGCCGG GTGACCGAATACCAA Pnap_0165 176160 - 174784 - | putative transposase TERM 207 174910 - 174920 + g 95 -3.2 -5.77853 | GGCGGTCCCGGTGCA TTGG ATG CCAG TTTTTTTTCCCGCTT Pnap_0166 176615 - 178423 + | multi-sensor signal transduction histidine kinase Pnap_0167 179400 - 178441 - | exodeoxyribonuclease III Xth TERM 208 179170 - 179209 + g 74 -2.1 -4.82901 | gap 2 GACGATCACGTCGCT GGGCTCGTGGCGGGTGTAG ATGC CGACGCCCGA-AT-AGCCC TTTTTCTCGGCAAAC pyrE 179453 - 180166 + | orotate phosphoribosyltransferase TERM 209 180401 - 180349 - g 93 -19.9 -3.05816 | gap 1, opp_overlap 180361 CGAGCTGTCACGCAA CGGCCTGCTCAAGCGCCA-GATCG GCCCTT CGCTCACGGCGCACGAGCAGGCCG CGCAGGATGAAAAGG TERM 210 180751 - 180736 - g 93 -3.2 -5.63374 | opp_overlap 180736 GGAACAGGAAAAAAA GCGC GTCAACCT GCGC TTTGACGAAGAACTG Pnap_0169 180176 - 180847 + | hypothetical protein TERM 211 180887 - 180922 + T 88 -11.4 -4.07687 | gap 1, opp_overlap 180900 180919 GCGCAATAGGGGCGG GCGCTTGAA-GCTAT ATTTTTA ATAGCATTCAAGCGC TTTTCCGCGCAGGCT gatB 182395 - 180938 - | aspartyl/glutamyl-tRNA amidotransferase subunit B Pnap_0171 183924 - 182392 - | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 212 182585 - 182627 + g 70 -7.6 -4.07568 | overlap 182596 182597 GACAACGTGTAGATG TCGGCCAGGTAGCTGGCGAC CGG GTCGTCGGATTTTTCGCCGA TTTTCCAGGCCACCG TERM 213 182596 - 182616 + g 74 -5.3 -4.61527 | overlap 182585 182597 GATGTCGGCCAGGTA GCTGGCGAC CGG GTCGTCGGA TTTTTCGCCGATTTT TERM 214 183072 - 183061 - G 76 -5.8 -4.56597 | opp_overlap 183066 GCCCGCGCCGAAAAA CTGC GTCG GCAG GCCGATTCTCAAGCC TERM 215 183236 - 183213 - G 77 -15.3 -2.62616 | CCATGGCGGACAGCA GCAGCGCGC AGTCCA GCGCGCTGC GCGCCATCGGGCCGG Pnap_0172 184220 - 183921 - | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 216 183980 - 183948 - G 79 -8.4 -4.30719 | gap 2, opp_overlap 183965 TTTCGGCACAAGAAA CAGGCC-GCGC-TCGA CGG CCGGTGCGCTGGCCTG GCTGGCCTCGCGCTG TERM 217 184502 - 184472 - H 74 -2.7 -4.92757 | gap 2, overlap 184474 TGATTAATAATAAAA GGCGATGCTGCAA CGAAGTT TTGC-GCAT-GCC CCAACTGGATTCCTG Pnap_0173 184476 - 185564 + | cell shape determining protein MreB TERM 218 185946 - 185919 - g 83 -7.6 -4.57569 | gap 1 GGAGGCCCGCAAAAA GCTCGCGCTGCAG TCG CTGC-GCGCCGGC CAGGTCGAGGAACTG Pnap_0174 185644 - 186564 + | rod shape-determining protein MreC TERM 219 186796 - 186806 + G 73 -6.8 -4.2558 | opp_overlap 186784, overlap 186787 AGACCTCGCTGCTCG GGCA GCA TGCC TTTTCCTACACGATG Pnap_0175 186561 - 187079 + | rod shape-determining protein MreD TERM 220 188837 - 188877 + G 71 -11.2 -3.53012 | gap 2, opp_overlap 188874, overlap 188837 188839 CCATCGTCCGCAAGG CGC--TGGTCGGGGTGACGC AGG GCGGCACCTCGACCAAGGTG TTTGCCGGCGCGCAG TERM 221 188837 - 188875 + G 84 -15.2 -3.34398 | opp_overlap 188874, overlap 188837 188839 CCATCGTCCGCAAGG CGCTGGTCGGGGTGACGC AGG GCGGCACCTCGACCAAGG TGTTTGCCGGCGCGC TERM 222 188839 - 188874 + G 80 -16.2 -2.60496 | gap 1, overlap 188837 188837 ATCGTCCGCAAGGCG C-TGGTCGGGGTGACGC AGG GCGGCACCTCGACCAAG GTGTTTGCCGGCGCG TERM 223 189301 - 189268 - g 74 -5.1 -4.56597 | gap 1, overlap 189299 189300 GCCGCGCCTCAAAAA GCCGAGCCCCCAGCCG TGG CGGC-AAGGACAAGGC CCTTCAGCCGGCAAA Pnap_0176 187285 - 189336 + | peptidoglycan glycosyltransferase Pnap_0177 190156 - 189398 - | hypothetical protein TERM 224 189504 - 189473 - G 71 -8.5 -3.88291 | overlap 189458 CACCAGCCGCACAAA GCCCGCGCCATGC TTGAGC GCCAGGCGCGTGC CCAGCAGGCTGCCCG TERM 225 189695 - 189677 - G 91 -5.2 -5.38054 | GCGGACAAACAAAAA CACCAGGA AAC TGCCGGTG CCGGGGCCGAAAAAA TERM 226 189934 - 189917 - G 78 -4.7 -4.75174 | overlap 189909 CAGCGAACCGAAAAA CCCGGCG GCAG CGGCAGG CAGCAGCGCTGACCA TERM 227 190162 - 190176 + H 71 -4.2 -4.60678 | overlap 190161 190160 ACAATTCCATGGCCG CGATTG TCG CATTCG TTTATTCTATTTTTG TERM 228 190296 - 190278 - H 100 -13.1 -5.81412 | opp_overlap 190278 GGCAGGCAAAAAAAA GCGCCGG GGTTG CCGGCGC TTTTTCCGAGCAGGC TERM 229 190278 - 190296 + H 100 -13.1 -4.56597 | opp_overlap 190278 GGCAGGCAAAAAAAA GCGCCGG GGTTG CCGGCGC TTTTTCCGAGCAGGC TERM 230 190496 - 190483 - H 80 -4.5 -5.0133 | opp_overlap 190483 190490 GATCTGGTTAAAAAA CCGCA TGGC TGCAG GATTTGCCCGCCTGT TERM 231 191608 - 191666 + G 75 -15 -2.78816 | overlap 191558 191622 TGCCGCGTCCGCCGG CGCCCTGTCCTGGATGGCGGCCGAGTGG CTG TCGCGCGGCCGCCCTTCGCTGCTGGGCG TGTGCTCGGGCCTGG Pnap_0178 190631 - 192079 + | ammonium transporter TERM 232 192387 - 192377 - g 73 -8.2 -4.09685 | overlap 192378 TCGGATGCCGCAAAA GCGC ACA GCGC CAAGGCCTGGAGCGC Pnap_0179 192110 - 192517 + | hypothetical protein Pnap_0180 194282 - 192546 - | glucose-methanol-choline oxidoreductase TERM 233 193575 - 193632 + g 78 -3.2 -4.98255 | gap 2, opp_overlap 193573 193572 193605, overlap 193590 CCAGAGTTCAAAGTT CGGCCGGCCCAGGCAGGTCGGCCGCAGG AAGG CCT-TGG-CGGTGTTCCAGCGCCAGCCG TTTTTCTGGTTGACC Pnap_0181 194426 - 195370 + | LysR family transcriptional regulator TERM 234 195995 - 196029 + G 72 -2.6 -4.72986 | opp_overlap 195991 195990, overlap 195998 ATCTCTACAACTTCG GCGCGACCGCGCTG CCGATCA CGGCGCTGGTGGGC TTTTTGATCGGCGTG TERM 235 196224 - 196260 + G 73 -10.7 -3.62572 | opp_overlap 196224 GCGCGTGACCGAAGA GCTGGACGCGATGCGCG TCA TGGGCATCGCGCGCGGC TTTCGCCTGGTGATG TERM 236 196370 - 196389 + G 100 -10 -5.06414 | gap 1, overlap 196374 TGGCGGCCGATATTT CGATGGGCG TGA CGCCC-TCG TTTTTCTTCAACGCG Pnap_0182 195478 - 196626 + | hypothetical protein TERM 237 196868 - 196913 + G 76 -8.2 -4.14392 | opp_overlap 196831, overlap 196861 196908 CGAACTGGGCAAGCG CGGCGCGGCCATGC-GGGTCGG CATG CTGTTCCAGCAGGGC-GCGCTG TTTTCAGCGTTCACG TERM 238 197309 - 197295 - g 73 -2.8 -4.72272 | CTGGCCCAGCAAAAA GTCATC ATC AACGAC ACGCCGCAAAAGGTG TERM 239 197343 - 197354 + G 73 -3 -4.72272 | GCTTTCGAGCACCCC TTCA TTCG TGAA TTTTTCCTGGGCGAA Pnap_0183 196623 - 197420 + | ABC transporter related TERM 240 198134 - 198124 - g 74 -2.4 -4.8622 | overlap 198126 CGCCTGAATGAAAAA GGCG GGC CGCT CGACAAGCTGAGGGA TERM 241 198313 - 198339 + G 76 -9.2 -4.07568 | overlap 198310 TTTGGCAACGGCCCG GCCGTCCCCGGC CCC GGCGAGGCCGGC TTTTCCGCCGACGGA Pnap_0184 197434 - 198366 + | hypothetical protein TERM 242 198700 - 198724 + G 71 -11.3 -3.53091 | overlap 198703 CGCGCTGGAGCATGC CGCCGGCCCAG TTG CTGCGCCAGCG TTTGCGCGAACGCCT Pnap_0185 198363 - 199067 + | putative lipoprotein Pnap_0186 199800 - 199168 - | multiple antibiotic resistance (MarC)-related proteins Pnap_0187 199954 - 200559 + | DSBA oxidoreductase TERM 243 200953 - 200967 + G 71 -5.6 -4.25104 | overlap 200921 GCCAGCGGCGGCAAG GTCGGC ATC GTCGGC TTTTGCTGGGGCGGC Pnap_0188 200608 - 201297 + | carboxymethylenebutenolidase Pnap_0189 201871 - 201305 - | hypothetical protein TERM 244 201436 - 201470 + g 76 -7.8 -4.3129 | overlap 201444 CAACCCCCACTTTCG CGGCAATTTGCTCCAG CAA CTGGAGCATCTTGGTG TTTTCCTGCTCGGTC TERM 245 201444 - 201462 + g 74 -13.2 -3.34486 | overlap 201436 ACTTTCGCGGCAATT TGCTCCAG CAA CTGGAGCA TCTTGGTGTTTTCCT TERM 246 201589 - 201577 - G 71 -5.5 -4.3467 | AGGCCGACAGGAAAA TCGCC TCC AGCGA AACAACCAGTGTCAG Pnap_0190 202682 - 201912 - | hypothetical protein Pnap_0191 203818 - 202703 - | Mg2+ transporter protein, CorA family protein Pnap_0192 204946 - 203930 - | delta-aminolevulinic acid dehydratase TERM 247 204238 - 204254 + g 80 -5.1 -4.8543 | CGTCGCTGTTGCCGG GGTCCAT CTG ATAGACC TTTTTGTCCGCCTTG TERM 248 205181 - 205207 + H 100 -12.3 -5.75342 | gap 1 GCAAAAAGGCATTTA TCCCGGCTGGCC AGCA GGTC-GCCGGGA TTTTTTTTGGCCGCA Pnap_0193 205309 - 205737 + | hypothetical protein TERM 249 206083 - 206094 + G 72 -2.2 -4.72986 | gap 1 AATTTGCTGGGTTAT GCGCC GCT GG-GC TTTTTGCTGGCCCTG TERM 250 206598 - 206620 + G 82 -14.8 -3.34398 | overlap 206596 CGGCTATTGCGTGGT CCGCACGCTG TGG CAGCGCGCGG TGTTTGCCGCCGCGA Pnap_0194 205816 - 207012 + | VanZ family protein Pnap_0195 207022 - 207393 + | ferredoxin-like protein TERM 251 207566 - 207533 - g 100 -15.3 -4.4267 | gap 1 CTCTAAAACCCAAAA GTCCAGCATCGCAGGC CCG GCCGGCG-CGCTGGAC ATTGCGCTGGACCTG TERM 252 207805 - 207856 + G 71 -5.7 -4.36914 | gap 2, overlap 207806 207818 TGCAGCATGTGGCGC CCGCCGG-CGAAGGCCAGGCC-GCG CTGG CGCTGGCCGGGTTCTCGTTCGGTGC TTTTGTCACCACCCA TERM 253 207932 - 207911 - g 100 -11.6 -4.52589 | CCGCCCGATAGAAAA GCTGGTGC TGGTCG GCACCAGC GTTAGCCGCGCCCCC Pnap_0196 207513 - 208157 + | putative transmembrane protein Pnap_0197 208232 - 209440 + | Serine-type D-Ala-D-Ala carboxypeptidase TERM 254 209470 - 209484 + F 73 -5.6 -4.62069 | opp_overlap 209447 GTGCGCCTGTTATCA GGCCCA ACT TGAGCC TTTTTGCCATCCAGC TERM 255 209513 - 209537 + F 79 -7.9 -4.37991 | opp_overlap 209512 209508, overlap 209528 209530 GCTTATACTAGAAGG CTTTTCCGC TTTTGGT GCGGGAAAG TTTTCCGTATTTTTA TERM 256 209528 - 209546 + F 84 -6 -5.07941 | opp_overlap 209512 209508, overlap 209513 209530 CTTTTCCGCTTTTGG TGCGGGAA AGT TTTCCGTA TTTTTATATCGTTTT rpsL 209585 - 209962 + | 30S ribosomal protein S12 Pnap_0199 210173 - 210646 + | 30S ribosomal protein S7 TERM 257 210811 - 210796 - f 74 -3.3 -4.84761 | opp_overlap 210808 AGACGCGTAGAAAAA CAAGA GAAATA TCTTG GCAACGAGTCTTTGT TERM 258 211696 - 211671 - g 71 -8.9 -3.9461 | opp_overlap 211668 211671, overlap 211672 GGCCTTCAAGAATAA GGGCGTGCAGC GCAT GCTGGACGCCG TGATTGAATTCATGC TERM 259 212609 - 212629 + G 86 -7.5 -4.74103 | opp_overlap 212608 212609 TGGACTCGAACGAAC TCGCGTTCA AGA TGGCCGCGA TTTTTGGCTTCAAGG Pnap_0200 210853 - 212955 + | translation elongation factor G TERM 260 212962 - 212994 + F 80 -5.4 -4.84527 | opp_overlap 212958 212957 212961, overlap 212963 212964 GCGAAGTAAACCCAG GCCGATGCCGGTGC CAAAA GCGCCGGCATCAAA TTTTTCCTGTCTGCG TERM 261 212964 - 212992 + F 72 -12.4 -2.69273 | opp_overlap 212958 212957 212961, overlap 212963 212962 GAAGTAAACCCAGGC CGATGCCGGTGC CAAAA GCGCCGGCATCA AATTTTTCCTGTCTG TERM 262 213303 - 213274 - g 77 -2.7 -5.06414 | overlap 213297 GCGCCCGAAGAAAAA GCGCGCGGCATCA CCAT CAACACCGCCCAC GTCGAATACGAAACG TERM 263 214252 - 214222 - g 70 -9.8 -3.67775 | gap 2 ATTGCCATGGAAGAA GGCCTGCGCTTCGC CATCC GCGAAG-GC-GGCC GTACCGTGGGCGCTG Pnap_0201 213103 - 214293 + | elongation factor Tu rpsJ 214321 - 214635 + | 30S ribosomal protein S10 TERM 264 214705 - 214745 + F 91 -12 -4.14243 | gap 1, overlap 214708 CTTCAATTTCTTCTG GTCTAGCGCGGATTTGCCA TTTT TGGCA-GTCTGCGCTATAC TTTTGGGCTGGCCTA TERM 265 214708 - 214742 + F 76 -12.3 -3.09831 | gap 1, overlap 214705 CAATTTCTTCTGGTC TAGCGCGGATTTGCCA TTTT TGGCA-GTCTGCGCTA TACTTTTGGGCTGGC Pnap_0203 214874 - 215554 + | ribosomal protein L3 TERM 266 215578 - 215617 + G 80 -5.6 -4.7254 | gap 1, opp_overlap 215577, overlap 215567 215580 215580 GAACTCCTGAATGAC CAGGGTCTGTCATCGTCCA AAG TGGACG-TGTCCGACACCG TTTTTGGTCGCGAAT TERM 267 215764 - 215754 - g 74 -2.4 -4.86731 | overlap 215740 215739 215756 GCCTTTTAAACAAAA GGGC ACT GGCC GCGCACGTGCAGGTA rplD 215554 - 216174 + | 50S ribosomal protein L4 TERM 268 216212 - 216222 + G 73 -6.8 -4.2828 | opp_overlap 216201 ATATGACGAAGGCCG CCTG ATG CAGG TTTTGGTCGCTCCCA Pnap_0205 216171 - 216497 + | ribosomal protein L25/L23 rplB 216497 - 217321 + | 50S ribosomal protein L2 TERM 269 217368 - 217353 - g 78 -3.2 -5.08824 | CGTTCACTCAAAAAA GGTCCA TTTG TCGACC ATCATTTGGTAGCCA Pnap_0207 217332 - 217610 + | ribosomal protein S19 Pnap_0208 217620 - 217949 + | ribosomal protein L22 TERM 270 218836 - 218808 - g 71 -10.9 -3.53343 | AAGCGCGTCCGCAAA GCCGCGCCAGCTG CAG CAGCTGACGGTGC CAAGACCGAGTAATC rpsC 217962 - 218849 + | 30S ribosomal protein S3 rplP 218874 - 219290 + | 50S ribosomal protein L16 Pnap_0211 219307 - 219510 + | ribosomal protein L29 Pnap_0212 219510 - 219779 + | ribosomal protein S17 TERM 271 219808 - 219837 + F 100 -14.5 -4.6038 | gap 1, opp_overlap 219814, overlap 219814 TGGCGGCTACGTCCT C-AAAAAGGCCCAC ACA GTGGGCCTTTTTTG TTTTCGTTTCCTGTG TERM 272 219830 - 219814 - f 100 -13.7 -4.57569 | opp_overlap 219814 219808 CTACGTCCTCAAAAA GGCCCAC ACA GTGGGCC TTTTTTGTTTTCGTT TERM 273 219814 - 219830 + F 100 -13.7 -5.85244 | opp_overlap 219814, overlap 219808 CTACGTCCTCAAAAA GGCCCAC ACA GTGGGCC TTTTTTGTTTTCGTT Pnap_0213 219963 - 220469 + | redoxin domain-containing protein TERM 274 220523 - 220500 - T 100 -12.4 -5.0538 | opp_overlap 220500 CTTGATTTCAAAAAA GCCGCAACTC GCAA GAGTGGCGGC TTTTTTATCGGCCCC TERM 275 220500 - 220523 + T 100 -12.4 -5.24129 | opp_overlap 220500 CTTGATTTCAAAAAA GCCGCAACTC GCAA GAGTGGCGGC TTTTTTATCGGCCCC Pnap_0214 221027 - 220539 - | GCN5-related N-acetyltransferase TERM 276 220980 - 220961 - G 77 -4.2 -4.8667 | gap 1, opp_overlap 220962, overlap 220962 CATATTCGAGAAAAA TCT-GCCGC GTG GCGGCCAGT TGATCGGGAGAATCG Pnap_0215 221771 - 221085 - | cytochrome B561 TERM 277 221727 - 221717 - G 76 -8.2 -4.13767 | opp_overlap 221719, overlap 221718 GCGTCCAGTGGAAAA GCCG CGT CGGC AAGTCCCAGACGCGT TERM 278 221744 - 221755 + g 72 -2.2 -4.75472 | AGTCCCAGACGCGTA CCTT GGTC AGGG TTTTGTTGCTGTACA Pnap_0216 221967 - 222422 + | cytochrome c, class II TERM 279 222514 - 222491 - T 100 -15.4 -4.20696 | opp_overlap 222491 CCATCAAGCGCAAAA GGCCAGTTTC ATCT GAAACTGGCC TTTTTTTGGATGAAA TERM 280 222491 - 222514 + T 100 -15.4 -5.47218 | opp_overlap 222491 CCATCAAGCGCAAAA GGCCAGTTTC ATCT GAAACTGGCC TTTTTTTGGATGAAA Pnap_0217 223065 - 222550 - | redoxin domain-containing protein TERM 281 223747 - 223719 - g 84 -2.2 -5.33124 | opp_overlap 223741, overlap 223720 AAGAAGAAAAGAAAA TCCGCCAGGACC CGGTC GGCACCGGCAGC GCCATCTTGCAGAAG Pnap_0218 223079 - 223783 + | hypothetical protein TERM 282 225140 - 225186 + G 75 -2.9 -4.90266 | gap 2, overlap 225169 GACCTGCTGGCCGAT CTGGAGCAGGCGCTGGCGGCGGT CTG ATCGTTGCCATCGC--GCAACAG TTTTTCGTTGATAAA Pnap_0219 223886 - 225166 + | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 283 225309 - 225324 + F 70 -6.8 -4.20367 | AGCGTCCAATCAGTT CTGGGA ATAT TCCCGG TTCTTTATTCGCCGC Pnap_0220 225345 - 225941 + | OmpW family protein TERM 284 225963 - 225990 + F 100 -20 -4.65895 | opp_overlap 225963 GTTTCCTGAACACAA GCCCTGTCATGC GCTC GCATGACAGGGC TTTTTACATGCAGGC TERM 285 225990 - 225963 - f 100 -20 -3.65812 | opp_overlap 225963 GTTTCCTGAACACAA GCCCTGTCATGC GCTC GCATGACAGGGC TTTTTACATGCAGGC TERM 286 226123 - 226147 + G 71 -9.2 -3.71687 | overlap 226092 226089 226087 226109 CGCCATGCAGCGGGT GGCCGGCGGC CTGCT GTTGCTGGCC TTTGCGGTGTTTTGC TERM 287 226234 - 226270 + G 73 -10.8 -3.57462 | overlap 226232 CGAAGCGGCCATGGT CGGCGCGGTGGCGG ACTGGTTTG CCGTCGTCGCGCTG TTTCGCCATCCGCTG Pnap_0221 225998 - 227326 + | hypothetical protein Pnap_0222 228149 - 227418 - | putative esterase Pnap_0223 229396 - 228149 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 288 228434 - 228466 + g 76 -11.2 -3.75461 | gap 1 CACCTTGGCCGCCTC CAGCGCGGCCA-GCC AGTC GGCCTTGCCGCGCAG TTTCATGACGCTTTC TERM 289 228788 - 228801 + g 85 -5.9 -5.03314 | CGCCAGGTCCACCAG CTGGC CAAC GCCGG TTTTTTCGGCATGGC TERM 290 228863 - 228883 + g 78 -6.7 -4.56597 | overlap 228871 CATGCCGGTCATCAG GTCGGCCAC GGC GACGCCGAC TTTTTGCGGGCCGCC Pnap_0224 229582 - 230601 + | periplasmic binding protein/LacI transcriptional regulator TERM 291 230672 - 230655 - T 100 -12.7 -4.62471 | GGCAATGGCGAAAAA GGCCGGA CAAG TCCGGCC CTGAGTACCTCAGAA Pnap_0225 231652 - 230702 - | hypothetical protein TERM 292 231149 - 231177 + g 73 -11 -3.6682 | gap 1 GGCGACGTAGGCTGC CCCGGGC-AACGT GCCG ACGGTCGCCCGGG TTTCGATGGCTCCGA TERM 293 231416 - 231434 + g 76 -5.8 -4.56597 | CACCCACATGTCGTC GGTCGCGG CGG CCCCGTCC TTTTTGGCCAGCAAG TERM 294 231587 - 231633 + g 73 -8.7 -4.10007 | gap 1, overlap 231588 231631 GTTGAACTCGGCGGC ATG-CGCTGCGCTAGCAGTCAC CAGC GTGACCGCTAGCGCGATGGCAG TTTTCGAAAGATTGT TERM 295 231738 - 231774 + H 95 -18.4 -2.87211 | opp_overlap 231744 231759, overlap 231744 231759 TCGTCTCATCTTCCA TTAAAAGCGCTTTGAA GTTAA TTCAAAGCGCTTTTAA TGTATCCAAAGCGAT TERM 296 231768 - 231744 - H 100 -13 -4.2558 | opp_overlap 231738 231744 231759, overlap 231759 CATCTTCCATTAAAA GCGCTTTGAA GTTAA TTCAAAGCGC TTTTAATGTATCCAA TERM 297 231744 - 231768 + H 100 -13 -4.39166 | opp_overlap 231744 231759, overlap 231738 231759 CATCTTCCATTAAAA GCGCTTTGAA GTTAA TTCAAAGCGC TTTTAATGTATCCAA Pnap_0226 231975 - 233042 + | periplasmic binding protein/LacI transcriptional regulator TERM 298 233137 - 233124 - f 75 -6.7 -4.42806 | overlap 233126 GGATTCTGAAATAAA TAGGC AGCA GCCTA TTGCCATGTCGATAG Pnap_0227 233340 - 234614 + | extracellular solute-binding protein Pnap_0228 234667 - 235974 + | extracellular solute-binding protein TERM 299 235966 - 235954 - f 93 -10.5 -4.38876 | CGAAAAATAGAGAAA GCGCG TGC CGCGC GCCCTTGACCGAAAG TERM 300 236166 - 236178 + G 74 -9.1 -3.95073 | opp_overlap 236163 GATCGGCAACGACGA GCTGG GAA CCAGC TTTGTCGGTGTCCGC TERM 301 236366 - 236392 + G 75 -11.6 -3.55447 | overlap 236367 TCTATTTCATGCCGG TGGCGACCAC GATGGCG GTGGTCGCCG TTGTGTGGTCACTGC Pnap_0229 235990 - 236928 + | binding-protein-dependent transport systems inner membrane component TERM 302 236999 - 237010 + G 74 -2.2 -4.91852 | ATACGCCCTGCATGC GCTG CTCG TAGC TTTCTTTTTGCTGCC Pnap_0230 236925 - 237821 + | binding-protein-dependent transport systems inner membrane component Pnap_0231 237855 - 238946 + | ABC transporter related Pnap_0232 238956 - 240437 + | alpha amylase, catalytic region Pnap_0233 241160 - 240723 - | UspA domain-containing protein Pnap_0234 241393 - 241187 - | hypothetical protein TERM 303 242074 - 242086 + G 80 -4.8 -4.83615 | opp_overlap 242064 GCAAATCGCGCCCGA GGTG GCCGA CACC TTTTTCTCCAGCCTG Pnap_0235 241592 - 242113 + | hypothetical protein TERM 304 242217 - 242264 + G 72 -7.6 -4.18018 | gap 1 TACTTCTGCTCGACG CTGCTGCG-CGCCATCACCGCCA CGC TGGCGCCGGTGCTGACGCAGGAG TTTTCGCTGCAGGCG TERM 305 242411 - 242437 + G 70 -7.3 -4.08945 | gap 1, overlap 242405 242399 CCTGGCCGTGCTGGG CTGCCTGGCC TTTTCAGC GGCC-GGCAG TTTTACCGGGCTGCT TERM 306 242591 - 242642 + G 71 -8.8 -3.88175 | gap 4 CTCGCTCGGCATGCT GGCCTCGACCCTGCCGGTGCAGTGGC TGAT GCCGCT-CATCGGCTGG--CG-GGCC TTGTTCTGGTGTCTG TERM 307 243270 - 243286 + G 72 -13.7 -2.71791 | overlap 243269 243274 TTTTCCGCCCTGGGC CTGGCGC AGG GCGCCAG CTTTCAGGCGGCCAT Pnap_0236 242106 - 243377 + | major facilitator superfamily transporter Pnap_0237 243374 - 243817 + | PTS system fructose subfamily IIA component Pnap_0238 243786 - 244055 + | phosphotransferase system, phosphocarrier protein HPr TERM 308 244120 - 244132 + F 71 -10.5 -3.29511 | opp_overlap 244128 CGCTGCGCCTGCAGC CCGGC AAA GCCGG TTCTGCGGCCCTGAC TERM 309 245867 - 245891 + G 72 -7.7 -4.19817 | CAGCATGACGCGGCT GCTGCTCGGGC TGG GGCTGCGCAGC TTTTCAATGCATCCG Pnap_0239 244239 - 246014 + | phosphoenolpyruvate-protein phosphotransferase Pnap_0240 246980 - 246138 - | hypothetical protein TERM 310 246337 - 246324 - G 75 -4.5 -4.8048 | gap 1, overlap 246325 246326 GTCCCAGAGGAAAAA CGC-GG TGC CCAGCG GCCCCCAGCCCATCA Pnap_0241 247236 - 247424 + | hypothetical protein Pnap_0242 248456 - 247458 - | lipoyl synthase Pnap_0243 249170 - 248496 - | lipoate-protein ligase B Pnap_0244 250065 - 249304 - | yecA family protein TERM 311 249458 - 249471 + g 72 -2.3 -4.76041 | GACAGGGACAACAAG GCCGG CAGA TTGGC TTTTTCATCAATCTG Pnap_0245 250450 - 250139 - | hypothetical protein Pnap_0246 251364 - 250453 - | aminotransferase, class IV Pnap_0247 251902 - 251459 - | hypothetical protein Pnap_0248 252163 - 252714 + | putative ATP synthase protein I Pnap_0249 252735 - 253628 + | F0F1 ATP synthase subunit A Pnap_0250 253702 - 253950 + | F0F1 ATP synthase subunit C Pnap_0251 253991 - 254461 + | F0F1 ATP synthase subunit B Pnap_0252 254483 - 255022 + | F0F1 ATP synthase subunit delta Pnap_0253 255082 - 256635 + | F0F1 ATP synthase subunit alpha Pnap_0254 256691 - 257557 + | ATP synthase F1, gamma subunit Pnap_0255 257597 - 259021 + | F0F1 ATP synthase subunit beta TERM 312 259027 - 259072 + F 83 -9.6 -4.21351 | gap 1, opp_overlap 259027 GAAGATGTAAGTAAA GCCGGCGTTTGGGCC-AGCCG CGTGC CGGCTTGGTCCGGGCGCCAAC TTTCTTCACATCTTT TERM 313 259453 - 259423 - g 78 -6.9 -4.60255 | gap 1 AGAAGCCCTGAAAAA CGCCAAGAACGATA TCGA TATCG-CCATGGCG CAGTCCGAGTTGGCC Pnap_0256 259103 - 259519 + | F0F1 ATP synthase subunit epsilon TERM 314 259556 - 259523 - T 100 -5.9 -5.8096 | overlap 259527 259531 CAGAAAAAATAAAAA CCAACAAGCGCAGAC TTCG GTCTGCAACTGCAGG CATCCGGCAACGGAT TERM 315 259586 - 259607 + T 100 -10.1 -5.65177 | TATCTGCAATCCCGA GCCCTTGCC GCAA GTCAAGGGC TTTTTTTATGCCTGT Pnap_0257 260171 - 259641 - | hypothetical protein Pnap_0258 261112 - 260180 - | hypothetical protein TERM 316 260565 - 260612 + g 73 -8.4 -4.10161 | gap 3, opp_overlap 260543, overlap 260564 260565 GTCGTCCAGTCGAAT CC-GCCGCCGCTGCCGCGATGGG TTTGT CCC-T-GCTGCGGCGCCGGCAGG TTTTCGCCGGTGATG Pnap_0259 261724 - 261125 - | LemA family protein Pnap_0260 261839 - 262285 + | hypothetical protein Pnap_0261 262290 - 263309 + | hydrolase of the alpha/beta-hydrolase fold-like protein TERM 317 263596 - 263609 + G 86 -8.1 -4.56597 | ATTACGAGAGCGATG CCAGC GGAC GCTGG TTTTTCCAGAACGGG TERM 318 263713 - 263760 + G 84 -14 -3.75153 | gap 1 TCACGGCGCACACCG GCCAGCCGGCACGCGTCCAGCGC TGC GTGCTGGACGAA-GACGGCCGGC TTTACCTTGAAACCG Pnap_0262 263367 - 263927 + | hypothetical protein TERM 319 263988 - 264004 + T 100 -13.7 -4.82901 | opp_overlap 263988 TTTTCATGAAAAAAA GCCGGTC ATT GACCGGC TTTTTCTGGAAAGGC TERM 320 264004 - 263988 - T 100 -13.7 -5.52384 | opp_overlap 263988 TTTTCATGAAAAAAA GCCGGTC ATT GACCGGC TTTTTCTGGAAAGGC Pnap_0263 264913 - 264032 - | cytochrome c, class I Pnap_0264 265785 - 265468 - | high potential iron-sulfur protein TERM 321 266349 - 266366 + H 90 -4.2 -5.41143 | TTCTTTCCATCCGGG TGACTT TGTGCC AAGTCA TTTTTTTCCAAGCTA Pnap_0265 266396 - 267367 + | hypothetical protein TERM 322 267344 - 267385 + F 95 -8.6 -5.02323 | gap 1 ACTGCCGTGGTCAAG GCTTCCGGCGCCACGGTGG ACTGA CC-CCAAGGTGCCGCAAGC TTTTATTTCTCATGG TERM 323 267626 - 267642 + G 72 -4.3 -4.62069 | overlap 267627 ACGATTCTGCGGACG CGCCACT GGC GGTGGCA TTTTTCCCCTGCAAC Pnap_0266 267397 - 267774 + | hypothetical protein Pnap_0267 269473 - 267782 - | AMP-dependent synthetase and ligase TERM 324 268252 - 268281 + g 73 -10.7 -3.5393 | gap 1, overlap 268241 TGTCGCCCGTGCGCA GCC-AGCCGTCTTC GGT GAAGGCGGCGCGGC TTTGCACCGGATCCT Pnap_0268 269697 - 270185 + | putative lipoprotein transmembrane Pnap_0269 271421 - 270195 - | Bcr/CflA subfamily drug resistance transporter TERM 325 270738 - 270720 - G 84 -11 -4.18367 | GAGCACATACAGAAA CATGCCGT TGA ACGGCACG CCGCTGGCCAGCGCC Pnap_0270 272278 - 271418 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 326 271480 - 271500 + g 76 -9.7 -4.07687 | ACGCGCCGGTGATGT CTGCTGTCA GCT TGACGGCGG TTTTCAGAGGCAACT TERM 327 271873 - 271841 - G 76 -6.2 -4.56597 | opp_overlap 271859, overlap 271857 271859 CTTGCTGGGCAAAAA GCCGGCAAAGACAA AACTG CTGCCGTTGTCGGC GCTGCCTTCGGCGCG TERM 328 271877 - 271857 - G 78 -4.6 -4.78848 | gap 1, opp_overlap 271859, overlap 271841 271859 CCGGCAAAGACAAAA CTGCTGCCG TTGT CGGC-GCTG CCTTCGGCGCGCGTC Pnap_0271 272329 - 272790 + | hypothetical protein Pnap_0272 272903 - 273502 + | phosphoheptose isomerase Pnap_0273 273499 - 274164 + | transport-associated Pnap_0274 275115 - 274213 - | 2-hydroxy-3-oxopropionate reductase TERM 329 275324 - 275337 + H 70 -3.1 -4.74215 | gap 1 GTCAAAGGTCTGCAT GCC-CA TGT TGCGGC TTTTCTTCATGATCT TERM 330 275753 - 275729 - g 73 -11.3 -3.62046 | opp_overlap 275731 CTACCGGGTCAAGAA CTGGCCCGAGT ACA ACGCGGGCCTG ATTGAGCGGGGCAAT TERM 331 276314 - 276299 - g 83 -11.8 -4.08706 | opp_overlap 276301, overlap 276295 TGCCTACGATACAAA GGCCGC CCGT GCGGCC ATTGCCGGGTGCGGC Pnap_0276 275673 - 276632 + | transposase, IS4 family protein TERM 332 277000 - 276980 - T 75 -11.1 -3.40403 | TGGCGCCCACCAGAA TGGCCAGGC CGC GCTTGGCCA TCACCACGTCCTTGA TERM 333 277135 - 277120 - T 72 -11.8 -2.75844 | overlap 277119 GCGTTGACGCGAAAG CGCCCG ATGC CGGGCG GCGAGATGGCGAAAT TERM 334 277310 - 277347 + T 71 -10.5 -3.25802 | gap 1, opp_overlap 277307 277308 277305, overlap 277314 CGGTCACAAACAGGT CGCTGCCGCCGCGGCTGA CCA TCAGCCGCAGCAG-ATCG TTGATGAATTTACTC Pnap_0277 278071 - 277439 - | cyclic nucleotide-binding protein TERM 335 277641 - 277617 - G 73 -2.8 -4.70659 | gap 1, opp_overlap 277621 277622, overlap 277618 277621 GTGCAGACTGAAAAA CGCACGCCGCT GTCC AGCAGCG-ACA TTTCACCCAGAATAT Pnap_0278 279147 - 278104 - | twitching motility protein TERM 336 279231 - 279247 + H 100 -12.3 -4.62069 | GGTGACGCAGAGCGC GGACAGC AAA GCTGTCC TTTTTAACGTAACAA TERM 337 279562 - 279538 - g 91 -15.1 -3.88559 | opp_overlap 279529 279556, overlap 279494 AAGGACCTGGACAAA GCCTGGCAAAA CTT CTTTGCCAGGC GCGCCGGCTTTTCGC TERM 338 279968 - 279954 - g 73 -3.5 -4.72986 | overlap 279938 279955 CAGGTTCAGCAAAAA CTGGC ACAAA GCCAA AAGGAAAGTTCAACG Pnap_0279 279280 - 280515 + | IS605 family transposase OrfB TERM 339 280548 - 280527 - g 70 -11.6 -3.17212 | GTAGCACCGTAGGAA TCCCCTGC TTGAAG GCAGGGGA GGATGTCAAGACCAC TERM 340 280810 - 280752 - g 78 -2.8 -5.00884 | gap 1, overlap 280753 280754 280784 280785 AGGGCGTCGAAAAAA TCCTGGCGCTGCGCCGCTGGCAAGCAG AAGAAG CGGCGCGC-AGCGGCGTGGCGGCAGCG GCGCTGGAGTGGCAC TERM 341 280926 - 280908 - g 82 -11 -4.08767 | overlap 280909 TGGACCGGCTGAAAA TCGCCCAG CGC CTGAGCGA GCAGCGCCCGCCCGG TERM 342 281223 - 281267 + G 95 -10.5 -4.56597 | overlap 281224 CGGCCGACCTGGAAG CCGCCATCCACGCCGGCAGCA CCA TGGTGCGGGTGGGGACGGCGA TTTTTGGCGGGCGCG TERM 343 281224 - 281266 + G 77 -14 -3.33744 | overlap 281223 GGCCGACCTGGAAGC CGCCATCCACGCCGGCAGCA CCA TGGTGCGGGTGGGGACGGCG ATTTTTGGCGGGCGC Pnap_0280 280508 - 281287 + | alanine racemase domain-containing protein Pnap_0281 283803 - 281293 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 344 281853 - 281819 - G 73 -11.4 -3.60971 | gap 1, opp_overlap 281819, overlap 281820 ACCGCAATGCTCAAA TCGGCGGCCTGCGGC CACGCT GCC-CAGGCCGCCAG CTGTTCGCAGGCGGT TERM 345 281852 - 281820 - G 75 -14.9 -2.76261 | gap 1, opp_overlap 281819, overlap 281819 CCGCAATGCTCAAAT CGGCGGCCTGCGGC CACGCT GCC-CAGGCCGCCA GCTGTTCGCAGGCGG TERM 346 282426 - 282454 + g 95 -18.9 -3.40403 | overlap 282427 282453 AGCCTGCCAGCCGTT CGGCGACCTGCTG CAG CAGCAGGTCGCCC TTGTGGTGGCCCAGG TERM 347 282427 - 282453 + g 100 -22.4 -2.64099 | overlap 282426 GCCTGCCAGCCGTTC GGCGACCTGCTG CAG CAGCAGGTCGCC CTTGTGGTGGCCCAG TERM 348 282768 - 282797 + g 79 -8.5 -4.30844 | gap 1, opp_overlap 282736 282762, overlap 282769 GGTAGATCAGCAGCT CGCTGC-GCGCATG CCG CTTGCGCAGCAGCA TTTTGGTCATGCCCT TERM 349 282769 - 282796 + g 70 -12 -3.18024 | gap 1, opp_overlap 282736 282762, overlap 282768 GTAGATCAGCAGCTC GCTGC-GCGCATG CCG CTTGCGCAGCAGC ATTTTGGTCATGCCC TERM 350 283394 - 283415 + g 71 -5.8 -4.34402 | overlap 283395 TTCTGGGTCGAGATG TCCTGCAG CACGCC CTGCAGGC TTTTGATCTGGCCGC TERM 351 283814 - 283792 - G 86 -16.2 -3.18383 | ACGGCCAGGGATGAA GCCGGGCGGC ATG GCTGCCCGGC CGCATGCGCAAACAG TERM 352 283955 - 283941 - H 74 -11.4 -3.21099 | opp_overlap 283940 283939 283928 GTTGCCGAGCAGCAA GCTGGC CTG GCCAGC GATTTCGTCGGCATT Pnap_0283 284971 - 285249 + | hypothetical protein Pnap_0284 285312 - 285641 + | hypothetical protein TERM 353 286296 - 286329 + G 72 -4.4 -4.65895 | gap 1 TGCCGACTATGTACC CGGCCGCGGCCTGCT CAAGC AGCTGGCAGCC-CCG TTTTTCGATCCCGAG Pnap_0285 285691 - 287121 + | glycosyl transferase family protein Pnap_0286 287118 - 288161 + | hypothetical protein Pnap_0287 288158 - 289177 + | hypothetical protein TERM 354 289582 - 289597 + G 76 -6 -4.65895 | overlap 289574 GCTCGGTCGCGGTCG GCGCGG GCGA CGGCGC TTTTTACCTGCCGCG Pnap_0288 289239 - 290069 + | putative lipoprotein Pnap_0289 290079 - 290918 + | hypothetical protein Pnap_0290 291076 - 291633 + | hypothetical protein Pnap_0291 292463 - 291738 - | LrgB family protein Pnap_0292 292839 - 292456 - | LrgA family protein Pnap_0293 294381 - 292879 - | FAD linked oxidase domain-containing protein TERM 355 293139 - 293173 + g 78 -15.1 -2.73364 | gap 1, opp_overlap 293134 293133 TCTCTAAAATGTCGG CGCCGAACAGCTCGCA GCGG TGC-AGCTGGTCGGCG TCGTTGGCGTCGAAC Pnap_0294 294562 - 295128 + | hypothetical protein TERM 356 295263 - 295241 - T 76 -12 -3.06501 | overlap 295230 CAGATCCCGACTGAA GCCGAGAGTG GCT CACCCTCGAC AGGCCTGGGCATGAG Pnap_0295 295557 - 295225 - | hypothetical protein TERM 357 295461 - 295483 + g 100 -6.2 -5.40072 | overlap 295457 295463 CGATGAGCATGCGCT TGCCGCCC AGCGAGC GGGCGGTG TTTTTTTCAAGGGCG TERM 358 295463 - 295481 + g 79 -8.8 -4.34482 | overlap 295457 295461 ATGAGCATGCGCTTG CCGCCC AGCGAGC GGGCGG TGTTTTTTTCAAGGG Pnap_0296 296607 - 295621 - | LysR family transcriptional regulator TERM 359 296357 - 296345 - G 100 -9.1 -4.8622 | opp_overlap 296345 GTGGTCAATGAAAAA TCGGC CCG GCCGA ACAGCTTGGTGCCGA TERM 360 296636 - 296672 + r 89 -13.8 -3.59262 | gap 1, opp_overlap 296629 GAAAATCACGGTTTT GTGGC-CATTGAGCACC ACCC GGTGCTCGCTGTGCCAC TTTACGGCTCTAGCC Pnap_0297 297463 - 296615 - | formyltetrahydrofolate deformylase TERM 361 297347 - 297329 - G 72 -2.3 -4.72986 | gap 1, opp_overlap 297330 297331 297333, overlap 297331 CACGCGCATGAAAAA CAGGCCCG TGTC CGGGTC-G TTGTACTGCGCCGCT Pnap_0298 298380 - 297499 - | hypothetical protein Pnap_0299 299653 - 298517 - | extracellular ligand-binding receptor TERM 362 299218 - 299195 - G 81 -4.4 -5.07053 | overlap 299196 AATCAGCGCAAAAAA CTCCTCGCGG TGCT CCGCGCGAAC CGGGAACACCAGCGG TERM 363 299501 - 299522 + g 78 -2.9 -5.02074 | gap 1, overlap 299504 299504 GGTTTGCATGCCCGC CAGC-ACGGC CGT GCCGTAGTCG TTTTTTCCACCCTCC Pnap_0300 300161 - 299880 - | hypothetical protein Pnap_0301 301428 - 300238 - | hypothetical protein TERM 364 300528 - 300509 - G 72 -7.8 -4.13767 | gap 1, overlap 300489 GCGCCCACCGGAAAA CCGGCCGGG TTG CCC-GCCAG CATGCCGCCCAGTTG TERM 365 301014 - 301032 + g 72 -12.4 -3.28712 | opp_overlap 301012, overlap 300995 GCGCCGAAGGCAAGG GCGCCAGG CTG TCTGGCGC TTGTGGGGCAGGCGG Pnap_0302 301458 - 302441 + | fumarylacetoacetate (FAA) hydrolase TERM 366 302478 - 302447 - T 100 -23 -5.14563 | overlap 302428 GGCGGGATGAAAAAA CACGCCGGGCGCCC TGCG GGGCGGCCGGCGTG CCGGGTGGTGCGCAG TERM 367 302479 - 302526 + T 83 -14 -2.70932 | GGGGCGGCCGGCGTG CCGGGTGGTGCGCAGCGACTGG CAGG CCAGACGCTTCACGCCATCGGG TGGTTACAAAGGCGC Pnap_0303 304749 - 302530 - | hypothetical protein TERM 368 304114 - 304132 + g 73 -3.1 -4.6902 | gap 1, opp_overlap 304105, overlap 304105 304097 304096 CAGAAAGTCCGCGGT GG-CCTTG CCAG CAGGGGCC TTTTTGCCGTTGTCG TERM 369 304828 - 304793 - H 83 -12 -3.68366 | opp_overlap 304799, overlap 304789 304799 GCACTTGAAAATCAA GGAAAACATGCCTG TGGTTGTT CTGGCATGTTTTCC CCACACGAAGTGGAC Pnap_0304 305021 - 305269 + | hypothetical protein TERM 370 306267 - 306218 - g 93 -7.5 -5.00616 | overlap 306246 306247 CCGGTGCCCAAAAAA GCCGCAGCCAAGACTGGTGCCGC CAAA ACGGCAGCCGCCAAGCCGGCGGC CAAGGCTGCGGTCAA TERM 371 306269 - 306246 - g 70 -7.3 -4.07568 | overlap 306218 306247 CTGGTGCCGCCAAAA CGGCAGCCG CCAAGC CGGCGGCCA AGGCTGCGGTCAAGG Pnap_0305 305357 - 306346 + | hypothetical protein TERM 372 306563 - 306542 - g 76 -13.7 -3.21276 | opp_overlap 306541, overlap 306540 GGCCCTGCCAGAATA CGCCAGCGC ACCG ACGCTGGCG CTGCTCTACATCACC TERM 373 307362 - 307384 + G 76 -6.2 -4.56597 | GCCATTGCCGACACG GTCAGCGTCG GCA TGAAGCTGGC TTTTTGCGAACGCAA Pnap_0306 306390 - 307733 + | hypothetical protein Pnap_0307 308469 - 307738 - | helix-turn-helix domain-containing protein Pnap_0308 308593 - 309492 + | hypothetical protein TERM 374 309582 - 309596 + G 83 -7 -4.82901 | overlap 309581 GCCCTGCTGCGCCAG CGCCGC TTC GCGCCG TTTTTCTGGACGCAG TERM 375 309887 - 309905 + G 100 -10.2 -4.72986 | CAATGTCCAGGTGCC GGTGCTGC TCG GCTGCACC TTTTTGATGGGCCTG Pnap_0309 309489 - 311465 + | phospholipid/glycerol acyltransferase Pnap_0310 311612 - 312070 + | hypothetical protein TERM 376 312256 - 312233 - g 93 -8.8 -5.00616 | opp_overlap 312235 CGCTGGCCGAAAAAA CGCTGGCCTC GCTC AACGCCAGCG GCGAGCGCGTCGTGC Pnap_0311 312085 - 312903 + | hypothetical protein TERM 377 314174 - 314154 - g 80 -6.1 -4.72272 | gap 1, overlap 314167 GTGCGCCAGCAAAAA GCGC-GCG AAGTGA CGCAGCGC ACCCTCAGCGGGCCG Pnap_0312 312927 - 314201 + | hypothetical protein Pnap_0313 314236 - 314685 + | YiaAB two helix domain-containing protein Pnap_0314 315595 - 314705 - | hypothetical protein TERM 378 314755 - 314735 - G 78 -6.7 -4.62069 | opp_overlap 314735 CTTGGATTGCAAAAA GCGCTGCTG GCG CCGCAGGGC CTCGACCGCGCTGCC TERM 379 315692 - 315654 - H 79 -3.1 -5.14563 | opp_overlap 315642 315655 315656 315657, overlap 315655 315657 315687 TTTGCTATTAAAAAA GTAGCTGTTTGCGCATA TTTGG TATGCACAAACGGCCTG TTTGACCATAAATTC TERM 380 315689 - 315657 - H 75 -11.4 -3.41701 | opp_overlap 315642 315656 315655 315657, overlap 315655 315654 315687 GCTATTAAAAAAGTA GCTGTTTGCGCATA TTTGG TATGCACAAACGGC CTGTTTGACCATAAA TERM 381 315657 - 315689 + H 72 -12.1 -2.61695 | opp_overlap 315657 315655 315654 315687, overlap 315642 315656 315655 GCTATTAAAAAAGTA GCTGTTTGCGCATAT TTG GTATGCACAAACGGC CTGTTTGACCATAAA TERM 382 316565 - 316555 - g 78 -6.8 -4.67038 | overlap 316557 CCTCGAAAAGCAAAA GCTC GTC GAGC AGCTGCCTGACGCTC Pnap_0315 315758 - 316816 + | hypothetical protein Pnap_0316 316942 - 318291 + | hypothetical protein TERM 383 318311 - 318356 + T 100 -20 -4.38154 | gap 1, opp_overlap 318315 318316, overlap 318316 318318 318351 ACGCGCTTTATGACT CAAATGGGCGCCCTGCGCATG CTGGA TATGCGCAGGGCGCT-ATTTG TTTTGTAGCGAATAT TERM 384 318352 - 318315 - T 83 -12.1 -3.68351 | gap 1, opp_overlap 318311 318316 318318 318351, overlap 318316 GCTTTATGACTCAAA TGGGCGCCCTGCGCAT GCTGGAT ATGCGCAGGGCG-CTA TTTGTTTTGTAGCGA TERM 385 318352 - 318316 - T 79 -13.7 -2.80796 | opp_overlap 318311 318316 318318 318351, overlap 318315 CTTTATGACTCAAAT GGGCGCCCTGCGCAT GCTGGAT ATGCGCAGGGCGCTA TTTGTTTTGTAGCGA TERM 386 318316 - 318352 + T 100 -16.6 -4.77173 | opp_overlap 318315 318316, overlap 318311 318318 318351 CTTTATGACTCAAAT GGGCGCCCTGCGCATG CTGGA TATGCGCAGGGCGCTA TTTGTTTTGTAGCGA TERM 387 318318 - 318350 + T 100 -21.4 -3.99938 | opp_overlap 318315 318316, overlap 318316 318311 TTATGACTCAAATGG GCGCCCTGCGCATG CTGGA TATGCGCAGGGCGC TATTTGTTTTGTAGC Pnap_0317 320175 - 318385 - | glycosyltransferase TERM 388 318436 - 318466 + g 74 -6 -4.4261 | overlap 318437 GTACCAGTAAGTCTC GGGCGTCTTCAGGG CGG CCATGAAGCCGTCG TTTTCGTCTTGGCGC Pnap_0318 320683 - 320195 - | GtrA family protein Pnap_0319 321924 - 320683 - | glycosyl transferase family protein TERM 389 321647 - 321671 + g 73 -10.7 -3.64049 | TGCACGTTGGCCGGG TCCATGACCTG CAT CAGGTCGAGGA TTTCGCGGTTCTTGC Pnap_0320 323091 - 321928 - | queuine tRNA-ribosyltransferase Pnap_0321 324172 - 323114 - | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase TERM 390 323623 - 323636 + g 72 -3.7 -4.56597 | opp_overlap 323605 323602 323601, overlap 323614 323613 323632 CGGCGGTCGGCGCGG CCACG GCGC CGGGG TTTTTGGCGAACACC TERM 391 324258 - 324235 - g 78 -10.2 -4.07687 | gap 1 ACCCGGCGCCGAAAA CCGC-CCTGCC CAT GGCCGGCGCGG CGGACAAGCCTGCCG TERM 392 324736 - 324773 + G 72 -4 -4.56597 | gap 1 CGGTGCTCAGCGGCC TGGCGCGGGCCGACCTC AGCGA GACGATT-CCCGCGCCA TTTTTAAGCAAAAAC TERM 393 325473 - 325418 - g 86 -8.7 -4.66833 | GGTGAAGTTCAAAAA CCTGGCGCTGGCCATCATCGACGAG CAGCAC CGCTTCGGCGTCGCCCAGCGCCTGG CGCTGCGCAGCAAGA Pnap_0322 324192 - 326339 + | ATP-dependent DNA helicase RecG Pnap_0323 326760 - 326359 - | hypothetical protein Pnap_0324 326904 - 327860 + | LysR family transcriptional regulator Pnap_0325 327973 - 328497 + | Ferritin, Dps family protein TERM 394 329178 - 329189 + G 81 -4.4 -5.01546 | overlap 329134 TGGCCGGCGTCATGC TCAG TTAC CTGA TTTTTATATCAATTT Pnap_0326 328532 - 329401 + | 4-hydroxybenzoate polyprenyl transferase TERM 395 329438 - 329454 + T 95 -10.8 -4.59853 | opp_overlap 329438 TGCGCCCATGAAAAA GCCCGC AATTC GCGGGC TTTTTAAGGACTTCA TERM 396 329454 - 329438 - T 100 -11.5 -4.72272 | opp_overlap 329438 TGCGCCCATGAAAAA GCCCGCA ATT CGCGGGC TTTTTAAGGACTTCA TERM 397 329851 - 329864 + T 74 -2.3 -5.04987 | overlap 329851 ACGAAAGTCGGTTGA CGGGA TTTT TCCGG TTTTTTGAAACTATT Pnap_0327 330823 - 329984 - | pyrroline-5-carboxylate reductase TERM 398 330932 - 330907 - R 78 -6.7 -4.62336 | overlap 330908 AGGGGATGTGAAAAA TGGCGATGGCG CCTA CGCCAGCACCG TCTGCCGCACCGCAT TERM 399 330931 - 330908 - R 73 -10.2 -3.3692 | overlap 330907 GGGGATGTGAAAAAT GGCGATGGCG CCTA CGCCAGCACC GTCTGCCGCACCGCA Pnap_0328 332412 - 330919 - | glycerol kinase TERM 400 334140 - 334158 + G 74 -5.3 -4.61231 | gap 1 GCAGGAAAACGGGAT GGAC-GCA AAAC TGCAGTCC TTTTTGGCGCTGTGC Pnap_0329 332614 - 334200 + | FAD dependent oxidoreductase TERM 401 334195 - 334219 + F 70 -5.6 -4.40561 | overlap 334196 TATTTGAGCGTGCCA GCCTGACGCA TTCCC TGCGGCAGGA TTATTTTTACAAACA Pnap_0330 334415 - 334783 + | ribosomal protein L14 TERM 402 334819 - 334806 - g 72 -2.3 -4.79174 | overlap 334807 334815 AGGCAATGAACAAAA TTCGC AAAG GCGAC GAGATCATCGTGATC Pnap_0331 334796 - 335116 + | ribosomal protein L24 rplE 335119 - 335658 + | 50S ribosomal protein L5 TERM 403 335828 - 335816 - g 72 -7.7 -4.11216 | TCTGGAGTTGCAAAA GTTGC CCC GCAAC GCCAACCCGACGCGT Pnap_0333 335667 - 335972 + | ribosomal protein S14 Pnap_0334 335991 - 336386 + | ribosomal protein S8 Pnap_0335 336411 - 336944 + | ribosomal protein L6 Pnap_0336 336956 - 337321 + | ribosomal protein L18P/L5E TERM 404 337411 - 337400 - g 85 -3 -5.26875 | overlap 337403 337404 GTCTGAAGGAAAAAA TGAT CGCG ATCA ACCGCGTGACCAAAG rpsE 337339 - 337857 + | 30S ribosomal protein S5 Pnap_0338 337871 - 338053 + | ribosomal protein L30 Pnap_0339 338067 - 338498 + | ribosomal protein L15 TERM 405 338569 - 338583 + G 72 -2.1 -4.77036 | opp_overlap 338551 AAGTTCGGCGACTTG CGCAA CAGGC TTGTG TTTTTGCTGCTGGCG TERM 406 339314 - 339334 + G 74 -2.5 -4.90266 | opp_overlap 339314 CTCTGAAGCTGAACA TGGCAGG CGTTATT CCTCCCA TTTTTGCTTCCTCGA TERM 407 339558 - 339546 - g 73 -3.3 -4.69622 | AGACAACCTGAAAAA GAGCG GGG CGTTC ATTCCGGGAATTCGT secY 338518 - 339825 + | preprotein translocase subunit SecY TERM 408 339955 - 339939 - g 74 -5.1 -4.63218 | CTTCGGTCAAGAAAA TTTGCCG CAA CTGCAAA ATCATCCGTCGCAAG Pnap_0341 339911 - 340024 + | ribosomal protein L36 rpsM 340050 - 340415 + | 30S ribosomal protein S13 TERM 409 340516 - 340488 - g 70 -10.1 -3.64283 | opp_overlap 340487 340485 340488, overlap 340477 GAAAGTTCGCAAGAA CGTGGCCGACGGC ATT GCCCACGTCCACG CTTCTTTCAACAATA Pnap_0343 340429 - 340833 + | 30S ribosomal protein S11 TERM 410 340841 - 340884 + F 100 -18.2 -4.07568 | gap 1, opp_overlap 340836 340835 GCATTTAAATCGTGC TGTT-TCGCCCGGCCGCTTGC TCA GCAGGCGGTCGGGCGCCAGCA TTTTCACCAAGCCCA rpsD 340964 - 341587 + | 30S ribosomal protein S4 TERM 411 341597 - 341626 + F 87 -15.8 -2.90075 | gap 1, overlap 341596 CGTTAATTTTTTGTT CCTGGCGGGCACG CTTGC CGTGCC-GCCAGG TGTGCTTCGCCAGCC TERM 412 342179 - 342194 + G 74 -5.4 -4.53475 | overlap 342159 CAAAGTCGATTGGCC GCATTG TGCT CGATGC TTCTTTTTCTCCGGT Pnap_0345 341683 - 342675 + | DNA-directed RNA polymerase subunit alpha Pnap_0346 342759 - 343160 + | ribosomal protein L17 TERM 413 343278 - 343308 + F 72 -11.3 -3.07936 | opp_overlap 343274 343285, overlap 343285 GTTGTTAAAATCAGT ACAAAAAGCCTAC TTTAT GTAGGCTTTTTGC TGTCTGTCTGCTATT TERM 414 343301 - 343285 - f 95 -8 -4.95806 | opp_overlap 343278 343285, overlap 343274 AAATCAGTACAAAAA GCCTAC TTTAT GTAGGC TTTTTGCTGTCTGTC TERM 415 343285 - 343301 + F 95 -8 -4.86133 | opp_overlap 343285 343274, overlap 343278 AAATCAGTACAAAAA GCCTAC TTTAT GTAGGC TTTTTGCTGTCTGTC Pnap_0347 343429 - 343887 + | hypothetical protein Pnap_0348 343907 - 344383 + | putative transposase of insertion sequence ISRm10-1 Pnap_0349 345706 - 344375 - | sodium/hydrogen exchanger TERM 416 345727 - 345714 - R 74 -4.5 -4.7078 | TCAATCATTGAAAAA CCCTG GGAT CAAGG ATGGAGGCCTGGAAA TERM 417 345828 - 345843 + r 70 -3.2 -4.7373 | AGGTGATACCAGGAT TCAGGG TTAA CCGTGA TTTTTGATGAAATAG Pnap_0350 347137 - 345932 - | phospholipase A1 Pnap_0351 347731 - 347159 - | hypothetical protein Pnap_0352 349937 - 347808 - | UvrD/REP helicase TERM 418 348638 - 348673 + g 70 -11.9 -3.13403 | gap 1, overlap 348637 CAAAGGTGTTCAGCG CGCCC-AGCGTGGTGT GGCCA ATGCCGCGCTTGGGCG TCTTGATGGAGCGGA TERM 419 348802 - 348815 + g 78 -6.7 -4.57341 | TTGTAGGGAATATTG GCCTT GCGA AAGGC TTTTTCGAACGGCTT TERM 420 349000 - 349018 + g 73 -8.8 -4.07687 | ACCGGCTCACCTTCG CCCAGTTC GCT GAACAGGG TTTTCGGGAACAGCT TERM 421 349430 - 349488 + g 74 -5.1 -4.57073 | gap 1, opp_overlap 349433, overlap 349431 349442 CCATCACGCGCGCAA TCAGGCGTTCCTCGTCGCCGCTGGCC TGCGCCTC GGCCTGCG-CGGCGTTGAGTCCCTGG TTTTTCCAGGCGCTG Pnap_0353 351274 - 350042 - | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase TERM 422 350738 - 350750 + g 74 -4.7 -4.56597 | overlap 350708 350707 GATCAAGAGGTCGGG CCGGC TGA GCCTG TTTTTCAGCAGCCAG Pnap_0354 353049 - 351271 - | putative bifunctional OHCU decarboxylase/allantoate amidohydrolase TERM 423 351511 - 351548 + g 89 -12.7 -4.15222 | gap 1 CTCCCAGCGCTGCTG CCAAGCGCGCGCGCTG GGCGCGG CGGCG-GCGCGCATGG TTTCTTCGAGCCGGT Pnap_0355 353999 - 353046 - | polysaccharide deacetylase Pnap_0356 354171 - 354527 + | transthyretin TERM 424 354892 - 354922 + G 76 -10.3 -3.96148 | overlap 354890 CATTTACGACTGGTC GGCCGGTGCGGCG ATTGC TGCCGCGCTGGGC TTTCTGGTGGCCGGC TERM 425 355004 - 354985 - g 100 -4.9 -5.93809 | opp_overlap 354998 CGGCCAGAAAAAAAA CGGCGAC CTGATC GTCGGCG CGGGCCTGCTGGTGT TERM 426 355597 - 355576 - g 72 -7.3 -4.18506 | gap 1 GCAGTTGCAAAACAA GGGCAT-TGC GCT GCACACGCCC GAATTGCTCGGGCAG Pnap_0357 354524 - 355741 + | hypothetical protein TERM 427 355774 - 355794 + T 71 -8.4 -3.87075 | opp_overlap 355765 355776 CATGAAGGCTTTTAA TAGCTATC TATTT GATAGCTA TTTATGCCCGCTGGT TERM 428 355860 - 355841 - T 100 -12.8 -4.58283 | opp_overlap 355849 355858 GAATGGCTTGAAAAA GACGCGGC AGGC GCCGCGCC TAGGCGCCATTGGCT Pnap_0358 356878 - 355874 - | ATPase central domain-containing protein TERM 429 358170 - 358158 - g 70 -7.7 -4.07687 | opp_overlap 358157 358158 ACCTGCTGGGCAAAA TCCTG TGG CAGGA ATTTCCGGAAGCCGT TERM 430 359258 - 359269 + G 73 -3.6 -4.72272 | overlap 359249 GAGTCGGGCGTTGAT GGCG ACAC CGTC TTTTTCGTCAAGGAC Pnap_0359 357176 - 359512 + | PAS/PAC sensor signal transduction histidine kinase Pnap_0360 360561 - 359491 - | hypothetical protein TERM 431 359582 - 359628 + g 73 -10.8 -3.57387 | opp_overlap 359574 359590, overlap 359584 CCGAACACCGCCTCG CCGACGAACATCGCGGCCAG CAACTCC CAGGCTGCGGTGTTGGTCTG TTTGCCCAGTATCTT TERM 432 359584 - 359626 + g 72 -12 -3.36073 | opp_overlap 359590, overlap 359582 GAACACCGCCTCGCC GACGAACATCGCGGCCAG CAACTCC CAGGCTGCGGTGTTGGTC TGTTTGCCCAGTATC TERM 433 360769 - 360739 - g 81 -2.5 -5.24129 | overlap 360748 TGCCCGTATAAAAAA CCTGAAAATTGGC GGAAA GCCAGTCTGCAAG CCAATCAAGGAAACT Pnap_0361 360685 - 361191 + | hypothetical protein Pnap_0362 363392 - 361263 - | primosomal protein N' TERM 434 361390 - 361365 - G 71 -8.9 -3.86346 | gap 1, opp_overlap 361354 361365, overlap 361340 361338 361343 CCAGGCGGCCAGAAA GCCCTGCAGCGC CTT GCGCGAC-GGGC TTTCGACCAGCATTT TERM 435 361624 - 361576 - G 100 -13 -4.62872 | gap 1, opp_overlap 361587, overlap 361566 ATCAAGGCTGAAAAA CCGAACGGCGACAGGCCG-GCCG CCTG CCGCTCGGCCAGTTGCTGCTCGG CAAAATCCGGGTAGT TERM 436 362910 - 362924 + g 81 -7.1 -4.72386 | opp_overlap 362907, overlap 362879 GGTGGCGCCAAACAG CAGCG CGGGC CGCTG TTTTTCACTGGTTTC TERM 437 363530 - 363546 + r 74 -8 -3.95986 | opp_overlap 363521 363540 GCAAGAGGCCGCAGA GCCTTG TAAAT CAAGGC TTTCCTTAAATTGCC TERM 438 363690 - 363701 + r 87 -2.2 -5.67063 | overlap 363684 TGTGTATAAGTCTGA TGGC GGGC GCTA TTTTTTTGTGGTAAA TERM 439 363769 - 363779 + r 70 -6.8 -4.08767 | GCTGCACCCGGTTTT CAGC CCT GCTG TTTTCGCAGGCTGCG Pnap_0363 364877 - 363768 - | uroporphyrinogen decarboxylase TERM 440 364236 - 364224 - G 70 -10.5 -3.57561 | GCTGAAGGTGTGAAA GGCCG CAT CGGCC AGCACGCCGCCCCAG Pnap_0364 364982 - 365347 + | hypothetical protein TERM 441 365435 - 365423 - T 75 -6.3 -4.67011 | opp_overlap 365422 365423 AATGCTACTGAAAAA TGTTG CGC CAACA ATTTAGTGCAGCACT Pnap_0365 365770 - 365438 - | hypothetical protein TERM 442 365647 - 365670 + g 93 -19.6 -2.89564 | opp_overlap 365631 CCACCTGTGCCACCA CGCCTGCGGC GCAG GCCGCAGGCG TGTCTCCGCTGAACA Pnap_0366 366377 - 365781 - | hypothetical protein Pnap_0367 366819 - 366415 - | roadblock/LC7 family protein TERM 443 366853 - 366869 + r 81 -2.2 -5.40072 | gap 1, opp_overlap 366845, overlap 366845 366843 366855 GCAAGCAGCCGTAGC GGC-GCC GCCC GGCCGTC TTTTTTTCAAGCCGG Pnap_0368 367313 - 366906 - | hypothetical protein TERM 444 367002 - 366990 - G 76 -9.1 -4.03234 | opp_overlap 366994 CTTGCGGCAGACAAA GCAGG CCA CCTGC TGCTGGCGTTTGCCG Pnap_0369 368777 - 367341 - | ABC transporter related TERM 445 368398 - 368410 + g 71 -6.2 -4.37092 | AGCTTGGCCGTCAGG CCGG CTTGC CCGG TTTTCTCCAGGAAAT Pnap_0370 369337 - 368774 - | protein of unknown function, ATP binding Pnap_0371 369740 - 369366 - | hypothetical protein TERM 446 369730 - 369719 - G 75 -3 -4.87892 | TGTCAAGAAAAGAAA TTTC ATTT GAAA GAGTCTGCATTTTTG Pnap_0372 371205 - 369880 - | methyltransferase type 12 Pnap_0373 371606 - 372061 + | hypothetical protein TERM 447 372108 - 372123 + T 71 -11.8 -2.52003 | opp_overlap 372104 372107, overlap 372107 372106 GACCCAAAACAGCAG GCGGCG GCTT CGCCGC AATTTGTTGTGGTCC Pnap_0374 372905 - 372171 - | putative lipoprotein TERM 448 372892 - 372878 - G 100 -9.2 -5.50723 | GCAGGAAAACAAAAA GCGGCA GGG CGCCGC GAAACTCACGCACGT Pnap_0375 373373 - 372909 - | CoA-binding domain-containing protein Pnap_0376 375590 - 373443 - | cytochrome c biogenesis protein, transmembrane region TERM 449 373601 - 373620 + g 74 -4.8 -4.62783 | CGCGGCGCGTCCAGT CGGCGCGC AGCA GGGCGACG TTTTTGGCGTCCATG TERM 450 373631 - 373666 + g 100 -9.6 -4.9645 | CGACGTTTTTGGCGT CCATGTCGGCCAGCAC GTCG GCGTTGGCCAGCGTGG TTTTCTTGTTGTACT TERM 451 373760 - 373812 + g 72 -11.9 -3.27923 | gap 1 GCTCGACCCGGCCGG GCTGCCAGTCCTGCCAGCGGGCCG AGGCTG CGGCC-GCTGGCGGGATCACCGGC TTGATGATGTTCGGG TERM 452 373859 - 373849 - G 76 -8.2 -4.16943 | overlap 373850 GCCCATATCGCAAAA GCGC AGA GCGC TACTGAAACCGTAGC TERM 453 374171 - 374147 - G 75 -13.5 -3.02144 | CGATGGCGCCGAACA CCGCCAGCGCC TGC AGCGCCGGCAG GCCGACGGCATAACC TERM 454 374503 - 374521 + g 84 -8.1 -4.42386 | TAGGCCAGCCCGGAG GTCAGGC GCGCG GCCTGGC TTTTCTGGCTCGCGA Pnap_0377 375774 - 376268 + | XRE family transcriptional regulator Pnap_0378 376278 - 376976 + | hypothetical protein TERM 455 377057 - 377081 + T 80 -4.2 -5.00616 | opp_overlap 377073, overlap 377056 377055 TAGTGATTTACGGGG CTGGCGGC AAAAACACC GCCGGCAG TTTTTTCGGCGCCCG Pnap_0379 377372 - 377049 - | hypothetical protein TERM 456 377513 - 377532 + H 77 -4.8 -4.87665 | opp_overlap 377499 377512 AGGTGCCGCACAATG GCCCCAAG ACTC CAGGGGGC TTTTTATGAATCGGC Pnap_0380 377538 - 378107 + | cytochrome B561 Pnap_0381 378109 - 378603 + | hypothetical protein TERM 457 378647 - 378631 - g 82 -3.6 -5.22794 | opp_overlap 378645 378646, overlap 378633 378640 ACAATGATGAAAAAA GTCACG AAAGG CGTGGC GAAACGCCTGATCTT Pnap_0382 378619 - 378939 + | hypothetical protein Pnap_0383 379996 - 378995 - | hypothetical protein TERM 458 379363 - 379319 - G 74 -14.9 -2.52464 | CGTGGCCTGAAGCCA GCCGGCCTCGAACCGCGCC CAGCGGC GGCGCGGTTCGCAGCAGGT CTGCAGCGCCTGCTC TERM 459 380139 - 380108 - R 100 -15.1 -4.58395 | overlap 380092 TGCAGTTTGCAAAAA CCGCCGCACCCGA GACCAA TCGGGGGCGGCAG CTCGAACGGGTTGGT TERM 460 380189 - 380177 - R 70 -6.9 -4.08216 | overlap 380178 GCACTCTTGCGAAAA CCGGC GGA GCCGA GGCTCCCCCATCCGA TERM 461 380235 - 380262 + r 74 -7 -4.3739 | gap 1, opp_overlap 380235 380236 380256, overlap 380243 GGCAAAAATGATGAA GCCGCAG-GTTCT GCG GGAAAACTGCGGC TTTTGTCGCAGAGTG TERM 462 380273 - 380256 - R 70 -6.9 -4.07568 | opp_overlap 380235 380243 GGTTCTGCGGGAAAA CTGCGGC TTTT GTCGCAG AGTGATTCGAGAGAC Pnap_0384 382046 - 380445 - | hypothetical protein TERM 463 382528 - 382499 - g 77 -2.2 -4.99043 | overlap 382501 TCGCTATAAATAAAA TAGCTGCTAGC-GC ATAC GCAGCAAGCA-CTA AAAGCCGATTTAGCT Pnap_0385 382417 - 382674 + | hypothetical protein TERM 464 382797 - 382773 - f 74 -11.3 -3.18264 | opp_overlap 382793, overlap 382774 CGGCGCATCGAGTAA GGGCAGCGCCC CAT GAGCGCCGCCG CCCCCGACGTCTTCA TERM 465 382796 - 382774 - f 83 -14.8 -2.50816 | opp_overlap 382793, overlap 382773 GGCGCATCGAGTAAG GGCAGCGCCC CAT GAGCGCCGCC GCCCCCGACGTCTTC Pnap_0386 382949 - 383554 + | helix-turn-helix domain-containing protein TERM 466 383712 - 383656 - f 74 -2 -5.00884 | gap 1, overlap 383657 383687 383689 ATTTTGCTTAAAAAA TGCACCCCGCGCCGCCTCAACCCGGCG CAAA CACCG-ACTGCAGCGTCGCCGCATGCG CCGGTTCCCGATTCA TERM 467 384752 - 384698 - g 88 -8.6 -4.78752 | gap 1, opp_overlap 384710, overlap 384699 AGGACAATGCAAAAA CCGCCGAGAACCTGCG-CTGGCT GGTCACGCAA AGCCAGGCGCATGTTCACGCCGA CCTGATCTTCGGCCT Pnap_0387 383746 - 385404 + | radical SAM domain-containing protein Pnap_0388 385516 - 385935 + | hypothetical protein TERM 468 386788 - 386768 - g 79 -9.6 -4.11216 | GCGGCACCCTGAAAA CCTGCGCC GTCAA GGCGCCGG GATTCGGCGACAGGC TERM 469 386957 - 386936 - g 76 -9.4 -3.97444 | AGATCACCAAGGAAA GCACCACC CTGATC GGTGGCGC GGGCAAGCCGCAGGC Pnap_0389 385951 - 387585 + | chaperonin GroEL Pnap_0390 387609 - 388067 + | hypothetical protein Pnap_0391 388119 - 388547 + | UspA domain-containing protein Pnap_0392 390396 - 388540 - | ATP-dependent metalloprotease FtsH TERM 470 389090 - 389117 + g 72 -13.5 -2.78384 | gap 1, overlap 389106 GGGTCGGTGCCCGGC TGGGCCA-GCGC CACCA GCGCATGGCCCA TCTCGTGAAACGCGA TERM 471 390000 - 389977 - G 75 -3 -4.91712 | gap 1, overlap 389947 389946 GCCAATCGACAAAAA GCCGCCCATGC CCT GCTTGT-CGGC GAAGCGGCGGAACAG Pnap_0393 390553 - 390900 + | hypothetical protein TERM 472 391196 - 391225 + G 76 -5.5 -4.56597 | overlap 391198 391205 ATCGCCAGCGCGCTG CCGCACTTGCCGG CCAG CCTGCCGGTGCTG TTTTTGCCCACGCAA Pnap_0394 390986 - 391855 + | creatininase TERM 473 391908 - 391879 - f 100 -9.3 -5.26119 | opp_overlap 391879 GCCGCAAAAACAAAA CCCCCAAGCCA GGGGTAAA CAGCTTGGGGG TTTGTACCGCAGGAC TERM 474 392606 - 392587 - g 86 -4.8 -5.1861 | overlap 392588 392591 TGGATCATGAAAAAA GCGATGGC CCAG GCCGGCGC CGGCGTGCCGTCGGC Pnap_0395 392221 - 393561 + | L-sorbosone dehydrogenase Pnap_0396 394308 - 393640 - | phosphoglycerate mutase Pnap_0397 396612 - 394345 - | integral membrane sensor hybrid histidine kinase TERM 475 394547 - 394592 + g 70 -13.1 -2.90496 | overlap 394545 ATCAGGCCCATGCTT CGGGTTTCGGCGTCGCCGCGC AGGT GCTCGGCCACCTCGTAGCCCG TCATTTCCGGCAGGC TERM 476 395235 - 395248 + g 72 -3.7 -4.57569 | CGCGCAGTGACTCCA GGCAC GAAC GGGCC TTTTTCCCCAGATCA TERM 477 395759 - 395741 - G 83 -5.3 -5.00616 | gap 1, overlap 395742 395743 CGCCGCCCCAAAAAA GCCGCCAT CATC ATGGC-GC AGGTGATGGCTATCA TERM 478 395806 - 395780 - G 81 -10.1 -4.2461 | gap 1, opp_overlap 395795 ATGGCTATCAATAAA CCGAG-CGTGGC AATC GCCACGGCGCGG CCCGCCGTGGCTTCA TERM 479 395795 - 395817 + g 86 -16.3 -3.24423 | opp_overlap 395780 CCGAGCGTGGCAATC GCCACGGCG CGGCC CGCCGTGGC TTCAATGTTGTTGAC TERM 480 396147 - 396105 - G 81 -15.5 -3.0644 | ATTCAATCGCGAAGA CCTGGGCCAGCACATAGCG TGTAC CGCCATGCGCCGGCACGGG CACATACATCACGGT TERM 481 396564 - 396552 - G 78 -3.3 -5.02074 | overlap 396499 CGACGGTCGAAAAAA CCACC ACC GGCAG CAAGATGGCGACTGC Pnap_0398 397241 - 396843 - | response regulator receiver protein TERM 482 397347 - 397318 - R 71 -4.9 -4.57341 | opp_overlap 397318 AACGCTTTGGAAAAA TTCACGCGGTTGC AAAC GCATCTGCTTGAA TTTGAAATTACGAAG Pnap_0399 398220 - 397480 - | hypothetical protein TERM 483 398094 - 398134 + g 75 -13.9 -3.09135 | GGAACTTGCCCATCA TGTGGTGCTGCAGGGCCGG TGC CAGGCGCTGCAGCAGCGCG TATCTTGCCCCTTCT Pnap_0400 399379 - 398447 - | PhzF family phenazine biosynthesis protein TERM 484 399434 - 399472 + r 76 -11.8 -3.14132 | gap 1, opp_overlap 399469 TTCAGGTCTGGGGCT GCGCTTCAAGTTGCGGG GCGGCG CCTGCAACC-GAAGCGC TTGATCCGGCGCGCA Pnap_0401 400640 - 399420 - | GntR family transcriptional regulator Pnap_0402 401629 - 400694 - | hypothetical protein TERM 485 400970 - 400937 - G 81 -10.2 -4.24204 | overlap 400955 CAGCCACATCGAAAA CACCGCCAGGTAGG CAAAGC CCCACCAGGCCGTG GCCTTGAGCGGCGTG TERM 486 401278 - 401237 - G 76 -8.7 -4.2349 | GGCGCACAGCCAAAA GCCGGCAGACG-GCCGCTG GCGATG CAGCAGCGCGCC-GACGGC TGCGGTGGCCAGCGG TERM 487 401941 - 401994 + G 70 -10.2 -3.56092 | overlap 401944 ACCGTTTGCTGGCGC CGGGCGCGCGCCTGC-CCTCGGTGCG GCTG TGCGCCGAGCAGCAGG-GCGTGAGCG TTTCCACGGTGGTGG TERM 488 402083 - 402097 + G 71 -5.7 -4.37886 | TTTTGTCCGGGATTT GGCAT CAAAT ATGCC TTTTGTGCACGCTGG TERM 489 402605 - 402617 + G 74 -9.1 -3.87815 | GTACTGCCAATTGCA CAGCC CCA GGCTG TTTGTCAGCGTCAGC Pnap_0403 401856 - 403277 + | GntR family transcriptional regulator TERM 490 403543 - 403526 - f 74 -2.7 -4.96848 | gap 1 CCTCGCACACAAAAA TCCTGAGA GGC TCCC-GGA ATCGGCAACATCCCC TERM 491 404192 - 404155 - g 75 -3.4 -4.87665 | gap 1, opp_overlap 404167, overlap 404157 404158 404160 GGTCACCTACAAAAA CACCAGC-ACCAAGTCC GTTGG GGGCTTGGTGGCCGATC TGCCGATTCCCGAAG Pnap_0404 403967 - 404509 + | hypothetical protein TERM 492 404488 - 404518 + F 83 -11.9 -3.66999 | gap 1 CGCCGTCACCGTGAA GCCTGCCAGCGCAG CCCG CTGAGCTG-CAGGC TTTCCATCAGTGAGT TERM 493 404558 - 404602 + F 93 -4.3 -5.53288 | gap 2, overlap 404558 404558 CATGGCGTGCCCTTG CCCC--ACAGCCGTTTTTCCG CATCA CGGAAGCACGGTTGGCAGGGG TTTTTTTGACTTCAG TERM 494 405084 - 405102 + G 74 -11.6 -3.53012 | GGGTAGAAGTGTTCG CCGACGCC AAT GGCGACGG TTTGCCCGACAACAC TERM 495 406562 - 406536 - g 75 -11.6 -3.65434 | overlap 406537 406552 AGAACAACGATACAA CGGCCAACAGCT ACA ACCTGTTGGCCA GCCAGACAGCGGCTT Pnap_0405 404675 - 407608 + | hypothetical protein TERM 496 407654 - 407689 + G 100 -17 -5.36441 | opp_overlap 407662, overlap 407687 407687 CAAGCCGGAGCCCTG GTGCGAAACACACGCT CTTG AGCGTTTGTTTCGCGC TTTTTTCTGTGCCAC TERM 497 407687 - 407744 + G 86 -13.8 -3.89587 | gap 3, overlap 407654 407687 407689 407734 TGAGCGTTTGTTTCG CG-CTTTTTTCTGTGCCACCTGCAACGGC GAC GCCAT--CAGGTGGCACAGAAAAAAGTCA ATTTTTTCTTAATAC TERM 498 407687 - 407745 + G 100 -7.8 -5.5112 | overlap 407654 407687 407689 407734 TGAGCGTTTGTTTCG -CG-CTTTTTTCTGTGCCACCTGCAACGGC GAC GCCAT--CAGGTGGCACAGAAAAAAGTCAA TTTTTTCTTAATACA TERM 499 407689 - 407741 + G 93 -21 -2.99438 | gap 2, overlap 407687 407687 407734 AGCGTTTGTTTCGCG CTTTTTTCTGTGCCACCTGCAACGGC GAC GCCAT--CAGGTGGCACAGAAAAAAG TCAATTTTTTCTTAA TERM 500 407789 - 407763 - g 81 -10 -4.1891 | TTTTCTTAATACAAA CGCAGGGCTCGC ACA GCGAGGTCCGCG AAAAGTGAGCGATGT TERM 501 408460 - 408431 - g 71 -5.7 -4.25104 | gap 1 TGTCGCTGACCAAAA CTGCCAGCTACCCC GGC GTGGTAG-TGCCAG GCACGACCCGCATCG TERM 502 409356 - 409375 + G 72 -4.2 -4.58663 | gap 1, opp_overlap 409331 409329, overlap 409357 CCAGGCGTCCGTCAG T-CCTGGCG ACA CGCCCGGTA TTTTTGACGACTCGT TERM 503 409357 - 409373 + G 74 -9.3 -3.90762 | opp_overlap 409331 409329, overlap 409356 CAGGCGTCCGTCAGT CCTGGCG ACA CGCCCGG TATTTTTGACGACTC TERM 504 410047 - 410029 - g 72 -13.8 -2.81471 | TACAACTCCATCACA CGCCAGCC CGT GGCCGGCG CACTCGTTACCTACA TERM 505 410844 - 410854 + G 86 -6.8 -5.00616 | ATGGCGCGTGCGCGT CACC GGT GGTG TTTTTTCAGACGAAG TERM 506 412399 - 412409 + G 86 -8.2 -4.56978 | overlap 412390 AGTTCACGCGGTGCC GCGC GCA GCGC TTTCTTCTTTAAAGG TERM 507 412622 - 412599 - g 77 -3.9 -4.87665 | gap 1, overlap 412600 GCGGATCGATAAAAA CCGCTCATAC CTCTT GTATG-GCGA CTTCACCACGGCCAG TERM 508 413973 - 413929 - g 79 -14.1 -3.44146 | overlap 413931 CGCGTTTACAACGAA TACCGCCTGGCCGATTCGCTC GAT GGGCGCACCGGCCAGGCCGCC ATGGGTGTGCGCAAC TERM 509 413971 - 413931 - g 93 -18.9 -3.29325 | overlap 413929 CGTTTACAACGAATA CCGCCTGGCCGATTCGCTC GAT GGGCGCACCGGCCAGGCCG CCATGGGTGTGCGCA Pnap_0406 407611 - 414867 + | hypothetical protein TERM 510 414875 - 414889 + F 79 -2.8 -5.22943 | opp_overlap 414868 CTAAATAATGCAGAT CGCAAA ATT TTTTCG TTTTTTAGGTTTGCT Pnap_0407 415038 - 418895 + | hypothetical protein Pnap_0408 419238 - 419056 - | hypothetical protein Pnap_0409 419430 - 419263 - | transposase, IS4 TERM 511 419712 - 419728 + r 72 -2.3 -4.83593 | GGGATATTCGGCATT TGTTATT TTT AATCACA TTTTTACTCCTTATT Pnap_0410 420377 - 419901 - | putative transposase of insertion sequence ISRm10-1 Pnap_0411 420855 - 420397 - | hypothetical protein Pnap_0412 422730 - 421048 - | phospholipase D/transphosphatidylase TERM 512 421904 - 421917 + g 79 -8.1 -4.27316 | GACGGCGCTTCGGGA CTGGC GGCT GCCAG TTTTGGCTTGAGCAA TERM 513 422519 - 422552 + g 73 -11.5 -3.66874 | overlap 422520 TGGGTGCCGGCCTTG TCCGCACGGGCCTGC ACCA GCCGGCCCAGGCGGG TTTCCATCGGGTTGG TERM 514 422668 - 422643 - G 100 -4.5 -5.48303 | overlap 422647 AGAAGCTCAAAAAAA CCAGGCACAGC CACT GCCGGGCACGG TGAAGACGAGGTGCT Pnap_0413 424816 - 422891 - | ABC transporter related TERM 515 424766 - 424749 - G 78 -4.9 -4.74103 | gap 1 GTTTCAAGGGAAAAA TCTGCATG GTC CA-GCAGA GCGACGTGCCCAAAA TERM 516 425347 - 425326 - H 76 -2.9 -5.04597 | opp_overlap 425326 425328 425331, overlap 425328 ATGGAGATAGAAAAA GTGGACTCA TTTA TGAGTTCTC TTCAATTCCGTTTTT TERM 517 425890 - 425868 - H 85 -9 -4.43477 | TGTACGGAACGAAAA GGCCAGCCCT AAT ACGGCAGGCC CATGACGGTACCGTA TERM 518 427001 - 427021 + H 75 -12.7 -2.53164 | overlap 426987 427000 CGCCCATTCTTATCG GCTGTTGTT TAA AACAACAGC ATTGGTCATCAATCC TERM 519 427304 - 427330 + H 75 -11 -3.32516 | opp_overlap 427303, overlap 427302 427298 427294 427308 CCTAATTTATTAATG CAAAGTATTCTC TTG GAGAGTGCTTTG TGTTGGTTGATTTAT TERM 520 427308 - 427326 + H 71 -6 -4.28323 | opp_overlap 427303, overlap 427304 427302 427298 427294 ATTTATTAATGCAAA GTATTCTC TTG GAGAGTGC TTTGTGTTGGTTGAT TERM 521 428091 - 428080 - H 77 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAATAGATCCT TERM 522 429391 - 429375 - H 70 -2.9 -4.7254 | overlap 429377 ACTGTTTATTAAAAA CACAGCA CTC TGCTAAG ACGAAAGTCGACGTA TERM 523 430640 - 430605 - H 84 -13.4 -3.14344 | opp_overlap 430604 GATTTGCTCTATGAA TTCGACGGATTGCTCC GCGT GGAACAATCCGTCAAC AAGTTATGCCTGATG TERM 524 430775 - 430814 + H 100 -16.6 -4.11394 | opp_overlap 430781, overlap 430781 GCTCTTATAGCCCCT GAACAAGCCCGGTTGATC ATTA GATTGACCGGGCTTTTTC TTTTGGGGGTGCAGT TERM 525 430781 - 430808 + H 100 -14.2 -5.45802 | opp_overlap 430781, overlap 430775 ATAGCCCCTGAACAA GCCCGGTTGATC ATTA GATTGACCGGGC TTTTTCTTTTGGGGG TERM 526 430808 - 430781 - H 74 -9.8 -3.62224 | opp_overlap 430781 430775 ATAGCCCCTGAACAA GCCCGGTTGATC ATTA GATTGACCGGGC TTTTTCTTTTGGGGG Pnap_0414 431209 - 431571 + | hypothetical protein Pnap_0415 431574 - 433643 + | recombinase Pnap_0416 434240 - 433656 - | transposase IS66 Pnap_0418 435651 - 434614 - | ISXo7 transposase Pnap_0419 436183 - 435689 - | IS4 family transposase Pnap_0420 437613 - 436531 - | transposase IS116/IS110/IS902 family protein Pnap_0421 438173 - 437610 - | hypothetical protein Pnap_0422 439050 - 438226 - | transposase IS66 Pnap_0423 439402 - 439115 - | IS66 Orf2 family protein TERM 527 439395 - 439360 - G 72 -11.9 -3.36515 | gap 2, overlap 439331 439358 GGGCAGCGCCAAAGA CGGCCACC-AC-CCGCG CCAG CGCGGTGTCGGTGCCCG CGCGCATGTCCAGGG Pnap_0424 439854 - 439444 - | transposase IS3/IS911 family protein Pnap_0425 441178 - 439931 - | transposase, IS4 family protein TERM 528 440396 - 440416 + g 83 -5.3 -5.0707 | overlap 440398 GATGCACTCTGCCTC CGGTGCGTG CAG CGCGTACAG TTTGTTTTTGTCTTT TERM 529 441235 - 441195 - H 74 -10.7 -3.55203 | AAAACCTCGTCGAAA TTTGCAAGAAATCAAATGC GGG GTATTTATTTTCTTGCAAA TTCAGCCCTCACAAA TERM 530 442273 - 442263 - g 76 -6.8 -4.44548 | GACACCGAAGCAAAA CTCC AGC GGAG GCAAGTCAAGTCTGA Pnap_0426 441484 - 442551 + | transposase IS116/IS110/IS902 family protein TERM 531 443576 - 443553 - g 76 -13.2 -3.53444 | overlap 443556 GCAGCGCTGGGCAAA CAAGACCAGC ATAT GCTGGCCTTG CAGGCGGTGCCGGGC TERM 532 443573 - 443556 - g 74 -9.1 -3.90744 | overlap 443553 GCGCTGGGCAAACAA GACCAGC ATAT GCTGGCC TTGCAGGCGGTGCCG TERM 533 443864 - 443811 - g 75 -13.7 -3.10056 | gap 1 AGGACGCAGCGAACA GGCTG-GATCACCGCGCTGCTGGCCC GCA GGCCCTACAGCGTGGTGGTCGCGGCC TTGGCCAACAAGCTG Pnap_0427 442923 - 443963 + | transposase IS116/IS110/IS902 family protein TERM 534 444171 - 444156 - gT 74 -6.8 -4.27443 | CCAGCAGGAAAACAA GCCTGC ACAA ACAGGC CGCATATAAGACTGC Pnap_0429 445519 - 444542 - | integrase catalytic subunit Pnap_0428 444129 - 444617 + | hypothetical protein Pnap_0430 445871 - 445572 - | transposase IS3/IS911 family protein TERM 535 445665 - 445688 + g 70 -10.3 -3.59979 | gap 1, overlap 445646 CTCCGGCGCACTGTG CGCGG-CCAC CGGCT GTGGTCCGCG TTTGCCCTCGAACAG TERM 536 446074 - 446089 + r 70 -9 -3.61988 | AACGGGCGAACCCGG GGCGAA TATA TTCGCC TTCCTTTGTGGCTAC Pnap_0431 446986 - 446057 - | beta-lactamase domain-containing protein Pnap_0432 447756 - 446986 - | hypothetical protein Pnap_0433 447789 - 448346 + | hypothetical protein Pnap_0434 448360 - 449985 + | glucose-methanol-choline oxidoreductase Pnap_0435 450012 - 450920 + | putative lipase transmembrane protein TERM 537 452009 - 451953 - g 72 -12.3 -3.25823 | gap 3, overlap 451965 TGCCGCTGACACCAA GTC-CGTGAACCATGGCCTGCGCGCGGC ACGC GCCGCGCTC-GGCC-TGGTCAGCGCGAC ACGGCGCATCGATGC TERM 538 452053 - 452040 - g 77 -3.7 -4.84359 | opp_overlap 452041 452042, overlap 452041 452042 CCATGTGCAGAAAAA CCTGG CTGG CCGGG GCCTGCCGAATTTTT Pnap_0436 451228 - 452340 + | response regulator receiver protein TERM 539 452414 - 452441 + G 75 -3.2 -4.82901 | overlap 452418 452420 452421 CCTGCTGCTGTTTTC CCTGCTTCCCGC CGGG GTGGTGGGCTGG TTTTTGTACCGCAGC TERM 540 452973 - 453008 + G 73 -11 -3.66654 | overlap 452964 452975 CTCACGCTGGCGCAG CCCGTCTATGGCGCTG ACGG CGGCGCCCTGGGCGTG TTTGCCGTTGACCTG TERM 541 452975 - 453006 + G 74 -12.2 -3.41222 | overlap 452964 452973 CACGCTGGCGCAGCC CGTCTATGGCGCTG ACGG CGGCGCCCTGGGCG TGTTTGCCGTTGACC TERM 542 453065 - 453081 + G 100 -9.3 -4.9218 | opp_overlap 453034 453067, overlap 453067 GCAGAGCATGCGAAT CAGCGCC CGT GGCGCGG TTTTTCTGGTCGATG TERM 543 453757 - 453732 - g 73 -13.3 -3.14132 | gap 1, opp_overlap 453731 GCTTCGCGTGACGAA GCCCTGGGCGCG GCG CGCGCC-AAGGC GGCATTCCTGGCCGC TERM 544 455187 - 455222 + G 72 -3.9 -4.56597 | opp_overlap 455187 455189 455190, overlap 455189 TCGGTGCTGGAAGAA GACCGCCA-GCGCTGCC TGCA GGCCG-GCATGGTGGGC TTTTTGCCCAAGCCG Pnap_0437 452337 - 455729 + | multi-sensor hybrid histidine kinase TERM 545 455811 - 455825 + F 80 -4.2 -5.04385 | opp_overlap 455808, overlap 455809 CGCTGAAAATGACGT TGCTGC ACT GCAACA TTTTTTGACCGTGTG TERM 546 455867 - 455901 + F 74 -2.9 -4.88129 | gap 1, opp_overlap 455868, overlap 455853 455852 455868 455899 TGCTATTTTTTATAT AGCGTATTGTGCA-GA TGGG TCATGCGCAATAGGCA TTTTTCATGCTTTTT TERM 547 455899 - 455911 + G 93 -3.4 -5.54264 | opp_overlap 455868, overlap 455868 455867 GGTCATGCGCAATAG GCAT TTTTC ATGC TTTTTTTGGCTGTTT Pnap_0438 455888 - 456715 + | GCN5-related N-acetyltransferase Pnap_0439 456915 - 457784 + | CBS domain-containing protein TERM 548 458040 - 458095 + G 72 -11.6 -3.38046 | gap 1, overlap 458043 458069 GGCGCTGGCCTTGCT GGCCGGGCAGCTCGATGGCGCG-CGCT CCT GGCGGCGCGGCGCCTGGCTGGGCGGCC TGTTTGCCGTCGCCA TERM 549 458433 - 458460 + G 77 -4 -4.93877 | gap 1 TGGATTGACCTTCAT CGCCGCGCTGGTC GCT GCCTGGC-TGGCG TTTTGTTTGCTCGCG TERM 550 459381 - 459398 + G 70 -10.5 -3.59262 | CGGCATCACGCCCTA CGCCTGG TGGG CCGGGCG TTTCGGGCTCTGGCC Pnap_0440 457921 - 459471 + | apolipoprotein N-acyltransferase Pnap_0441 460394 - 459474 - | LysR family transcriptional regulator TERM 551 459982 - 459958 - G 86 -8.5 -4.57569 | overlap 459969 GGATGCGTGTAAAAA CCCAGCGCA AAGTCCA CGCGCCGGG TCAGCAGCGCCTCGA TERM 552 461617 - 461604 - g 72 -3.7 -4.62471 | overlap 461606 CTGAACCCGCAAAAA GCCCG CATC CTGGC CGCCGTGGCATTGAC Pnap_0442 460542 - 461681 + | L-asparaginases, type II TERM 553 461735 - 461761 + F 93 -12.2 -4.3255 | opp_overlap 461735 CCGTAACGTGTAAAA GCCCCCGGCATG GCC TGTACCGGGGGC TTTCTTCATTGGGCG TERM 554 461761 - 461735 - f 95 -13 -4.14392 | opp_overlap 461735 CCGTAACGTGTAAAA GCCCCCGGCA TGGCCTG TACCGGGGGC TTTCTTCATTGGGCG TERM 555 462194 - 462176 - g 72 -8 -4.12188 | GGACGACTGGGAAAA CCCGACGC TGG GCGCCTGG GGCCTGGGCTGGGAA glyQ 461823 - 462749 + | glycyl-tRNA synthetase subunit alpha TERM 556 462839 - 462818 - g 83 -8 -4.58283 | gap 1 CAAGGCGCTGAAAAA GCTCGGCGA TGCCT TCGCCG-GC GTGCTGGCCGAGCAG Pnap_0444 462753 - 464888 + | glycine--tRNA ligase TERM 557 465261 - 465280 + G 74 -4.9 -4.63218 | CGCGATGCTGGAGCG GCACCTG AACCGG CAGGGGC TTTTCTTGCAGGGCA Pnap_0445 464914 - 465564 + | hypothetical protein Pnap_0446 465564 - 466148 + | histidinol-phosphate phosphatase family protein Pnap_0447 466315 - 467082 + | phospholipid/glycerol acyltransferase TERM 558 467264 - 467227 - g 80 -5.5 -4.68724 | gap 1, overlap 467229 467230 467261 GGATTCAATACAAAA TATGCCTTCTGCGCAGGC GGA GCAAGCGCAGACAGC-TA TCGAAACAGTAGCGA TERM 559 467717 - 467753 + G 95 -10.2 -4.56597 | gap 2, opp_overlap 467714, overlap 467740 467741 467744 GGCCAGATTCAACTC GCTGTGCAGGCCTGGCTG CAG CAGC-AGGCCCG-GCAGC TTTTTACCGCCCGGC TERM 560 467740 - 467772 + G 77 -2.5 -5.00616 | opp_overlap 467714, overlap 467717 467741 467744 GGCCTGGCTGCAGCA GCAGGCCCGGCAG CTTTTTA CCGCCCGGCTTGA TTTTTTCGCGGCGCA Pnap_0448 467090 - 468049 + | hypothetical protein Pnap_0449 468166 - 468606 + | response regulator receiver protein TERM 561 469033 - 469045 + G 81 -2.6 -5.1861 | overlap 469027 469040 GGAAGGTTCCCAGGG CGCT GCGCG GGCG TTTTTTGGTGATCGC TERM 562 469346 - 469336 - g 71 -4.6 -4.4009 | CGCCATTGGACAAAA GGCC GCC AGCC CGGTTCTGCAGGAAG TERM 563 470525 - 470508 - g 74 -6.2 -4.42386 | TCGCCATGGACAAAA CGGCCC AGGACA AGGCCG AAAAGGAAACCCAGG TERM 564 470960 - 470935 - g 85 -3.1 -5.32608 | overlap 470937 AAAAAATGGAAAAAA CATCGGCCTGC TCCA GCTGTCCGACA AGTACGAGGGCGAGT TERM 565 471958 - 471973 + G 84 -2.4 -5.24531 | overlap 471957 471960 TCAAACATTCGATGC GGCCGG GTTG CCGGTA TTTTTTGTCAGGGAT TERM 566 471960 - 471971 + G 76 -7.2 -4.25873 | overlap 471957 471958 AAACATTCGATGCGG CCGG GTTG CCGG TATTTTTTGTCAGGG Pnap_0450 468674 - 472207 + | multi-sensor signal transduction histidine kinase TERM 567 472910 - 472893 - g 76 -5.5 -4.56597 | opp_overlap 472881 CGCCTGGTGCAAAAA CCGGTCA ATTT TGACTGG CTGCAAGGCTACGTC Pnap_0451 472320 - 472961 + | response regulator receiver protein TERM 568 473420 - 473403 - g 76 -5.5 -4.56597 | overlap 473405 473408 GGTCCGGCCCAAAAA TACCAGC GCCT GCTGGAA GACAGCAAACGCTAC TERM 569 473418 - 473405 - g 71 -8.1 -3.90048 | overlap 473403 473408 TCCGGCCCAAAAATA CCAGC GCCT GCTGG AAGACAGCAAACGCT TERM 570 474484 - 474502 + G 82 -3 -5.22312 | overlap 474486 TATGGGCTGAAAGTC CGGGCC AGGGGGG GGCCAG TTTTTTCATGTCGCT Pnap_0452 472986 - 474545 + | PAS/PAC sensor signal transduction histidine kinase TERM 571 474822 - 474832 + G 73 -8.2 -4.07885 | overlap 474821 TTGACCTGACCACCC GCGC CAT GCGC TTTTACGAGGACATG Pnap_0453 474767 - 475162 + | MerR family transcriptional regulator TERM 572 475191 - 475170 - f 73 -10.3 -3.39289 | overlap 475163 TAAAATAGGCCATAA TTGACGTTT ACGT AAACGTCAA GCAAAATGCCAGCCT Pnap_0454 475243 - 475686 + | hypothetical protein TERM 573 476668 - 476719 + G 76 -6.4 -4.46212 | gap 1, overlap 476669 476671 476671 GCCAAGAACCTGGAC ATGCTG-GGCACGGACCATGTGCGC CAG GTGCGCAAGGACTGTGCCTCGGTGA TTTTGTGGTGCGCCG TERM 574 476671 - 476716 + G 73 -12.5 -3.20028 | gap 1, overlap 476671 476669 476668 AAGAACCTGGACATG CTG-GGCACGGACCATGTGCGC CAG GTGCGCAAGGACTGTGCCTCGG TGATTTTGTGGTGCG TERM 575 476753 - 476740 - g 72 -4.5 -4.56597 | opp_overlap 476744 476745, overlap 476744 TGGTGCGCCGAAAAA GCCAC CTGG ATGGC CGGCGAAGGCATCCA Pnap_0455 475729 - 476910 + | acyl-CoA dehydrogenase domain-containing protein Pnap_0456 476964 - 477623 + | carbonate dehydratase aceK 477701 - 479572 + | bifunctional isocitrate dehydrogenase kinase/phosphatase protein TERM 576 480779 - 480766 - g 77 -2.3 -5.00616 | opp_overlap 480772, overlap 480767 CGCGGCCTCAAAAAA GGCGT TGCC ACGCT GTGCATAGGCGGCGG Pnap_0458 479647 - 480828 + | acetyl-CoA acetyltransferases TERM 577 481106 - 481094 - g 79 -9.1 -4.15044 | overlap 481095 TGGTGCTCGAAGAAA TCGCC GCT GGCGA CGGCGGCACCAGCAC TERM 578 481210 - 481191 - g 75 -3.4 -4.85599 | overlap 481192 CCCAGCGCAGAAAAA GCAGTGGC TCAT GCCGCTGG CGCAGGGCGATCTGT Pnap_0459 480874 - 482004 + | acyl-CoA dehydrogenase domain-containing protein Pnap_0460 482039 - 482455 + | rhodanese domain-containing protein TERM 579 482633 - 482614 - f 84 -2.8 -5.42259 | gap 1, overlap 482615 482616 TGATCCTGAAAAAAA GCGCAGCGT GCT AAGCTGC-C AGGACAACTCATTTT TERM 580 482888 - 482863 - g 71 -13.3 -3.06915 | overlap 482815 ACCTACGGCATGGAA GCCGTGGCG CGCCAGTT CGCCACGGC CAGGCATGTGCTGGT TERM 581 483408 - 483397 - g 86 -7.2 -4.78764 | overlap 483399 GAAACCTATGAAAAA GGCG GCCA CGCC TACCACGCGACCCTG Pnap_0461 482671 - 483831 + | aminotransferase, class V Pnap_0462 484824 - 483853 - | hypothetical protein TERM 582 484941 - 484905 - H 76 -2.9 -5.03715 | overlap 484907 ACCAGCGTCAAAAAA TATCCGCGAACGCAC GCTAAAT GTGCGCTCCCCGATG ACCGATGCGTTGAGA Pnap_0463 485047 - 485313 + | aminotransferase, class V Pnap_0464 485946 - 485332 - | hypothetical protein Pnap_0465 486200 - 486994 + | hypothetical protein Pnap_0466 487094 - 487504 + | hypothetical protein TERM 583 487766 - 487748 - g 79 -8.8 -4.28774 | opp_overlap 487748 487748, overlap 487741 487749 TGATCGAAGCCAAAA CCGGCCAG CCA CTGACCGA GGACTGGATGGCCGA Pnap_0467 487567 - 488226 + | HAD family hydrolase Pnap_0468 488861 - 488415 - | Ion transport 2 domain-containing protein Pnap_0469 489941 - 488880 - | helix-turn-helix domain-containing protein TERM 584 491772 - 491757 - g 78 -6.8 -4.58773 | overlap 491758 GCGACGAAATGAAAA CCCAGC TCGG GCTGGA AGAAGACAAAACCGC Pnap_0470 490052 - 491791 + | acyl-CoA synthetase TERM 585 492897 - 492920 + G 74 -5.2 -4.57073 | opp_overlap 492891, overlap 492899 492911 492912 TTCATCGAACTGTGC TGCCAGCGCA AGAT TCCGCTGGTG TTTTTGCAGAACATC TERM 586 493087 - 493103 + G 74 -2.1 -4.89852 | overlap 493089 ACGGCATGTGCGGCC GGGCGTT CTC ACCGCGC TTTTTGTGGATGTGG Pnap_0471 491808 - 493415 + | propionyl-CoA carboxylase Pnap_0472 493424 - 493945 + | DinB family protein TERM 587 494094 - 494118 + G 71 -5.6 -4.36914 | gap 1, overlap 494097 494108 CGAGGTGCGCGCCGT GGTGCTGGCCG CCAT CGGCCCG-GCC TTTTGTGCCGGCGCC TERM 588 494108 - 494135 + G 70 -10.6 -3.61178 | gap 1, overlap 494097 494094 TGGTGCTGGCCGCCA TCGGC-CCGGC CTTTTGT GCCGGCGCCGA TTTGAACTGGATGCG Pnap_0473 493942 - 494724 + | enoyl-CoA hydratase TERM 589 494872 - 494923 + G 72 -11.6 -3.31691 | gap 3, overlap 494895 GGGCTGGATGGAGCT GCCGCAGG-GCCT-GCACCTGCTGG CCAAT CCGGT-GGTGCTGGGCGCCAGCGGC TTCATGGTGTTTGTC TERM 590 495009 - 495035 + G 83 -7.8 -4.56597 | overlap 495008 CCGTGATCCGCATCC CGGCCGGCGCTG CCC TGGCGGCGGGCG TTTTTGGCGCCGACA Pnap_0474 494747 - 495418 + | putative transmembrane protein TERM 591 495809 - 495786 - g 72 -4.4 -4.66609 | gap 1, overlap 495787 CAGCTGATGGAAAAA GCCGGCGTTCC GCT GGTGC-CCGGC TACCACGGCGCGGAC TERM 592 496913 - 496875 - g 95 -10.9 -4.65895 | CTGCTCAGCGAAAAA GCCACCGAAGGGGCCGA CCCGT TCAGCCGCCGCGATGGC TGGCAAACGCATGGC Pnap_0475 495411 - 497423 + | carbamoyl-phosphate synthase L chain, ATP-binding Pnap_0476 497441 - 498370 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Pnap_0477 498375 - 499301 + | pyruvate carboxyltransferase TERM 593 499341 - 499354 + G 72 -3.7 -4.56597 | opp_overlap 499335, overlap 499342 TTCCAGAAGGCGTGC AGCGG GTTG CCGCG TTTTTGCAGGACAAG TERM 594 499589 - 499621 + G 100 -13.4 -4.27316 | opp_overlap 499577 499611, overlap 499588 AAACGGCTGGGGCGC GCCGATGCGGCATT CGTCA AAAGCCGCACCGGC TTTTCGATTGGCGGC TERM 595 499621 - 499611 - g 73 -8.2 -4.09685 | opp_overlap 499589 CGGCATTCGTCAAAA GCCG CAC CGGC TTTTCGATTGGCGGC Pnap_0478 499301 - 500053 + | YbaK/prolyl-tRNA synthetase associated region TERM 596 500577 - 500600 + G 71 -5.2 -4.46212 | gap 1, opp_overlap 500561, overlap 500562 500574 500579 500580 500586 500597 CGACGAGGCCATCGC GCTCGGCGTGT TTG GCGTGCCG-GC TTTTGTCGTGGACGG Pnap_0479 500050 - 500739 + | DSBA oxidoreductase TERM 597 500921 - 500943 + G 73 -8.4 -3.99324 | CCACCATTTTGGCGC CGGGTGCG CAGCCGA CGCACCTG TTTGTCATCATCAAG TERM 598 501251 - 501263 + G 71 -4.8 -4.42386 | TCGATGAGGCTTTTG TGCG CACGC CGCA TTTTGTCGATGCCGA TERM 599 501576 - 501591 + G 80 -5.4 -4.82901 | CGGCGTGCTCGAAGC GCTGGA CCTG TTCAGC TTTTTGTCCAACCAC Pnap_0480 500800 - 502626 + | cyclic nucleotide-binding protein TERM 600 503222 - 503251 + G 83 -4.9 -5.03314 | gap 1, opp_overlap 503231, overlap 503227 GTCGGCCCACGACGC GCTGAACGACGCCA TCA TGGCGGCGCT-GGC TTTTTTGAAGCTGCG Pnap_0481 502623 - 503285 + | DNA polymerase III subunit epsilon Pnap_0482 503441 - 503794 + | transport-associated TERM 601 503834 - 503818 - T 100 -10.8 -5.24129 | opp_overlap 503818 CGCGGGCATAAAAAA CCGGGC GCGCG GCCCGG TCGATTCTGGCAATG TERM 602 503848 - 503866 + T 74 -11 -3.24406 | overlap 503843 503842 GGTCGATTCTGGCAA TGCGGATC GTC GGTCCGCA TGTCTATTTGTCCTC TERM 603 504112 - 504130 + T 100 -16 -4.11484 | opp_overlap 504112 CGTTTCCATAAAAAA TGCCGGGC AGT GCCCGGCA TTTTCAGGAGTTAAG TERM 604 504130 - 504112 - T 100 -16 -5.24129 | opp_overlap 504112 CGTTTCCATAAAAAA TGCCGGGC AGT GCCCGGCA TTTTCAGGAGTTAAG Pnap_0484 506234 - 505881 - | hypothetical protein TERM 605 507305 - 507327 + G 75 -14.8 -2.70232 | overlap 507302 507308 GATCCTGGCGCTGGT CGGCCTGACC GCC GGCCAGGCCG TCGTCTGGTATTCGG TERM 606 507430 - 507440 + G 78 -4.6 -4.8083 | CTTACTCGCTGCTGC TGGC GAC GCCG TTTTTCGTGGTGTTC TERM 607 507743 - 507722 - g 76 -8 -4.2828 | gap 1, overlap 507723 GGTCAGCTACGAAAA CGTGGCCGG GCCCG CCGG-CACG GTCGCCTCGATCAAG Pnap_0485 506556 - 508214 + | major facilitator superfamily transporter Pnap_0486 508230 - 508733 + | hypothetical protein Pnap_0487 509847 - 508744 - | extracellular ligand-binding receptor TERM 608 510716 - 510676 - g 85 -6 -5.09225 | gap 1, overlap 510677 ACCTGACTGAAAAAA TCCGCGTCATCGAGGCGAT TGAA ACCGCCCTGAAG-CGCGGC GGCCGCCTGAATGTG TERM 609 513573 - 513626 + G 86 -8.5 -4.56597 | opp_overlap 513573 GGCGTCTATACGGAA CTCGCCGACTGGGCGCGGCCGCGCG GCTA CACGCATCTGCGCGTCGATGGCGAG TTTTTGCCGACCACC TERM 610 514100 - 514142 + G 100 -19.2 -3.57144 | gap 1, overlap 514102 TGCGGTTTGCCCGGC CTGCGCAGGCACGCGCCTG AACCCG CAGGCGCGTGCC-GTGCTG TTTGCCGATGCCGGG TERM 611 514102 - 514140 + G 95 -20.4 -3.36515 | gap 1, overlap 514100 CGGTTTGCCCGGCCT GCGCAGGCACGCGCCTG AACCCG CAGGCGCGTGCC-GTGC TGTTTGCCGATGCCG TERM 612 514935 - 514925 - g 72 -2.4 -4.6902 | GCACAACCTCAAAAA CGTC ACC GTCG AAGTGCCGCTCTACC TERM 613 515093 - 515054 - g 83 -15.6 -3.14564 | gap 1, overlap 515087 GCAGCGCTCGACCAA GGCCGGGCGCGAGGCCGAC GAC GCCGG-CAAGCACCCGGCC TGGACCGGTTGCGAG TERM 614 515247 - 515276 + G 81 -7.8 -4.4078 | GCCGACACGCTCGAA GCGCGC-GCGCGCG GCTA CGCG-GCAGGGCGC TTTTCCTTCAACACC Pnap_0488 510042 - 515939 + | excinuclease ABC, A subunit Pnap_0489 516348 - 517784 + | S-adenosyl-L-homocysteine hydrolase TERM 615 517795 - 517821 + F 100 -10 -5.00884 | overlap 517796 ATTGAGATGCCTTGT GGCCCCTGCGCT CCG GGCGCAAGGGCG TTTTTTAAGCCAAAT TERM 616 517796 - 517820 + F 89 -13.5 -3.60048 | overlap 517795 TTGAGATGCCTTGTG GCCCCTGCGCT CCG GGCGCAAGGGC GTTTTTTAAGCCAAA TERM 617 517871 - 517885 + F 83 -7.2 -4.66987 | opp_overlap 517836 517837 TGCATGCGCTAGCAG CTATCA AAA TGATAG TTTTATTCCCCTGTA TERM 618 518061 - 518044 - g 78 -3.3 -5.00616 | overlap 518045 518055 GTGGCCTGGAAAAAA GTCGCCA AGAA CGGCGAT GAAATCCCCGGCAAC Pnap_0490 517927 - 519003 + | ribosomal RNA methyltransferase RrmJ/FtsJ TERM 619 519197 - 519212 + G 78 -4.6 -4.7497 | opp_overlap 519190, overlap 519193 TTCAGGAAGAGGGCG TGGCCG CCGC CAGCCA TTTTTCCTGCGTCGG Pnap_0491 519013 - 519843 + | 5,10-methylenetetrahydrofolate reductase TERM 620 520555 - 520520 - g 83 -4.7 -5.08601 | gap 2 CCAGCTCAAGAAAAA CGGCAAGGCACCGCGCC GCTC GGCAC-GCAC-TCGCCG CTGATTTGCCACCGG Pnap_0492 519843 - 520559 + | rare lipoprotein A TERM 621 520680 - 520663 - f 70 -5.5 -4.41895 | opp_overlap 520668 520669, overlap 520619 AAGGGTTAAGGAAAA CCGGC AGCACCGA GCCGG AGCGTTTACTAGAAT TERM 622 521100 - 521087 - g 72 -4.5 -4.65895 | overlap 521088 GCGCTGATGGAAAAA CCCTC CGGC GAGGA TGACATCCATGCCCA Pnap_0493 520730 - 521353 + | hypothetical protein TERM 623 521433 - 521463 + G 74 -4.7 -4.59773 | gap 1, overlap 521436 CATCCTGTTCCCGAC CATCAGCATCTCGC TGGC GTG-GGTGCTGCTG TTTTTCAAGCTGCGC TERM 624 522158 - 522148 - g 72 -2.4 -4.81249 | TGGCAAACGCAAAAA GGCG TTC CGGC GGTGCTGTTCGCGCT Pnap_0494 521356 - 522768 + | cytochrome bd ubiquinol oxidase, subunit I TERM 625 523388 - 523418 + G 70 -7.4 -4.08945 | GGCATCGCGGCCATC TCGCTGGCCACACC GTG GGTCAGCCCGGCGA TTTTCGACAAGTGGT TERM 626 523576 - 523588 + G 78 -4.8 -4.74801 | GGTGCCTTTTGGCGC CACC ATCGG GGTG TTTTTGCTGGCGTTC Pnap_0495 522761 - 523792 + | cytochrome bd ubiquinol oxidase, subunit II Pnap_0496 524825 - 523803 - | hypothetical protein TERM 627 524530 - 524561 + g 82 -2.8 -5.1675 | overlap 524524 GGCTCAGGTGCTGCG GGAGCGGCTTTGGC CGTG GCTGCAGGCGCTAC TTTTTTAATAGCTGC TERM 628 524709 - 524729 + g 72 -4 -4.66609 | gap 1, overlap 524712 GCCGGCGTGGGTGTC GATCACGGT CAGG GCCGTG-TC TTTTTGGGTCAGGTA Pnap_0497 526469 - 524874 - | regulator of RNA terminal phosphate cyclase TERM 629 525774 - 525754 - G 71 -5.3 -4.45083 | opp_overlap 525753 525754 TTGACATCGACAAAA GCGCCGC TGACCTG GTGGCGC GATTTTTTCAGCTCG TERM 630 525900 - 525925 + g 70 -7.6 -4.07568 | gap 1 GATCAGGGCGTTGAA GCGGGGGTTGC GCGTG GCAATCC-CGC TTTTCAGGAACGACA TERM 631 526486 - 526507 + H 70 -3.1 -4.79352 | gap 1, overlap 526469 GGGCTAGTTTACTGG CTGGATTTAT AAA AT-AATCCGG TTTTGTTCTCGCTAA TERM 632 527009 - 526995 - g 81 -7.1 -4.71061 | AGCGAGATCGAAAAA GCCGT TCCCC ACGGC ATGACGCCCAAGGAG Pnap_0498 526614 - 527906 + | hypothetical protein TERM 633 528443 - 528453 + G 73 -8.2 -4.07568 | TTGAGCTGGAGCTGC GCCG CCA CGGC TTTTACCCAGCCGGC Pnap_0499 527926 - 529023 + | RNA-3'-phosphate cyclase rplM 529265 - 529708 + | 50S ribosomal protein L13 Pnap_0501 529705 - 530097 + | ribosomal protein S9 TERM 634 530147 - 530126 - f 100 -12.9 -5.40072 | opp_overlap 530126 TGCTTTGCAAAAAAA GCCGCCTGG TCCG CCTGGCGGC TTTTTTCATGGCGCT TERM 635 530126 - 530147 + F 100 -12.9 -5.14965 | opp_overlap 530126 TGCTTTGCAAAAAAA GCCGCCTGG TCCG CCTGGCGGC TTTTTTCATGGCGCT Pnap_0502 530261 - 530626 + | iron-sulfur cluster insertion protein ErpA TERM 636 530686 - 530670 - f 86 -10.8 -4.08767 | opp_overlap 530670 GCCATTTTTTTAAAA GCCGCC TTCAG GGCGGC TTTTACGTTGCGGCT TERM 637 530670 - 530686 + F 91 -11.5 -4.27584 | opp_overlap 530670 GCCATTTTTTTAAAA GCCGCCT TCA GGGCGGC TTTTACGTTGCGGCT TERM 638 532328 - 532379 + G 100 -4.2 -5.40474 | gap 1, opp_overlap 532327 532326, overlap 532356 ACCTGTGGAACAAGG TCAGCGCCGCCGTCTGCACCTCGGC CAC GCTGACG-GCCTGCGGCAGCTTTGA TTTTTTTGACCGCCT TERM 639 532356 - 532374 + G 74 -5.9 -4.5187 | opp_overlap 532327 532326, overlap 532328 CTGCACCTCGGCCAC GCTGACG GCCTG CGGCAGC TTTGATTTTTTTGAC TERM 640 532529 - 532579 + G 84 -16.1 -3.05844 | gap 1, opp_overlap 532536, overlap 532533 TCTCCGATGAGCTGT GCGACAAGCTGCCCGGGCTGCTGC GCGA GCACCCGCACGGGCAGCTGGT-GC TGTTCACGTCCAGGC TERM 641 532533 - 532576 + G 81 -16.6 -2.75074 | opp_overlap 532536, overlap 532529 CGATGAGCTGTGCGA CAAGCTGCCCGGGCTGCTGC GCGA GCACCCGCACGGGCAGCTGG TGCTGTTCACGTCCA TERM 642 532573 - 532536 - g 91 -16.9 -3.29144 | opp_overlap 532533 532529 TGAGCTGTGCGACAA GCTGCCCGGGCTGCTGC GCGA GCACCCGCACGGGCAGC TGGTGCTGTTCACGT Pnap_0503 530809 - 533061 + | helicase c2 anmK 534244 - 533105 - | anhydro-N-acetylmuramic acid kinase Pnap_0505 535678 - 534281 - | peptidase M23B TERM 643 534789 - 534779 - G 78 -4.6 -4.74103 | opp_overlap 534781 CGGGGAACTCAAAAA CGCG CGG CGCA GGCTCTTGCCGTCCA TERM 644 535967 - 535952 - g 70 -10.4 -3.55444 | GTCTGACCGTGTAAA GACGGC GCTG GCCGTC TCCCTGCGGGGCTGC Pnap_0506 535905 - 537137 + | tyrosyl-tRNA synthetase Pnap_0507 537151 - 537615 + | D-tyrosyl-tRNA deacylase TERM 645 537642 - 537677 + T 76 -5.6 -4.77036 | gap 1, opp_overlap 537629 537644, overlap 537629 ATGCTATTGTTTAGA TAGCTGCTTGCGC CCGTCCCTGTT GCGCAAG-AGCTA TTTTTGATGCTGAAA Pnap_0508 538151 - 537696 - | hypothetical protein Pnap_0509 539178 - 538141 - | PhoH family protein TERM 646 539303 - 539283 - g 91 -3.1 -5.40072 | GCTGGCCGAAAAAAA TCCGCCCGA AAT CCTGGTGGA CTGCCATGGCGTCGG TERM 647 539332 - 539345 + G 72 -3.8 -4.58395 | GGCTATGAGGTGCTG GTGC CCATGA GCAC TTTTTACAACCTGCC ruvA 539239 - 539817 + | Holliday junction DNA helicase motor protein Pnap_0511 539830 - 540756 + | hypothetical protein ruvB 540753 - 541823 + | Holliday junction DNA helicase B TERM 648 541998 - 541986 - T 71 -6.2 -4.36914 | CCTGCCTGCACAAAA GGCC TGAAT GGCC CGAAATTTCAAGTCA Pnap_0513 543196 - 542006 - | putative threonine aldolase Pnap_0514 543898 - 543224 - | phosphoglycerate mutase TERM 649 543460 - 543481 + g 75 -13.7 -3.08679 | gap 1 CGACCAGCGCGATCA GCTCGCCCGG GTG CCGGGCG-GC TATTCGCTCGGCGGC Pnap_0515 544574 - 543948 - | hypothetical protein Pnap_0516 545540 - 544596 - | PP-loop domain-containing protein TERM 650 544815 - 544854 + g 71 -5.6 -4.2828 | gap 1 CGGATACTGCTTTTG CCAGTCGCGC-AGCATGTT GCC GACCTGCTTGCGCTGCAGG TTTTCCTGGCTGCCG Pnap_0517 545998 - 545546 - | dihydroneopterin aldolase TERM 651 545822 - 545832 + g 86 -4.6 -5.14563 | ATCGACCTGGATCGG CTGC GGC GCGG TTTTTTCATGCGCCA Pnap_0518 546762 - 545995 - | short-chain dehydrogenase/reductase SDR TERM 652 546618 - 546581 - G 100 -15 -4.25848 | gap 1, opp_overlap 546580 546579, overlap 546569 AAGTCGGCATCAAAA GCAGCCGA-TGCGCACG TCAGC CGTGCGCAGTCAGCTAC GGTTTTAATAGCGTC Pnap_0519 546835 - 547941 + | hypothetical protein Pnap_0520 548057 - 548335 + | hypothetical protein TERM 653 548489 - 548505 + G 76 -5.8 -4.57073 | gap 1, opp_overlap 548483 CCCAGACCACGCGAG GC-GCGC TGGT GCGCAGC TTTTTCGAAAACCTG TERM 654 549293 - 549325 + G 71 -6.2 -4.2558 | gap 1, overlap 549323 TTTACGACCTGCTGT GCGTGCGGGCTTACG GCGA CGAAGGCCTG-GCGC TTTTCATCGGCGATG Pnap_0521 548332 - 549600 + | HipA domain-containing protein Pnap_0522 549611 - 549805 + | hypothetical protein TERM 655 549930 - 549918 - f 71 -7.7 -4.04141 | opp_overlap 549918 549919 GAATAATTAATTAAA TGGCA TGG TGCCA TGTCTGAATTAACTT TERM 656 550016 - 550029 + G 83 -9.5 -4.38712 | opp_overlap 550014 AAATTTTCCAAACTG GCCGC TGCT GCGGC TTTTGTGGCGGTGGC Pnap_0523 549995 - 551251 + | extracellular solute-binding protein TERM 657 551274 - 551288 + T 100 -5.6 -5.48825 | overlap 551271 551275 GTGCCGCGCTGGCGG TCTGGC CGG GCCGGG TTTTTTTCAATCCTG Pnap_0524 552680 - 551295 - | alpha,alpha-trehalose-phosphate synthase (UDP-forming) Pnap_0525 554497 - 552677 - | glycoside hydrolase 15-related Pnap_0526 555273 - 554494 - | HAD family hydrolase TERM 658 554867 - 554902 + g 91 -5.2 -5.26875 | gap 1, overlap 554868 CACAGGCTTTCGAGT TCGGGCGC-GTGCCGGT AAT GCAGGCTCAGCGCCAGG TTTTTTCGTTCCAGC Pnap_0527 557479 - 555398 - | lytic transglycosylase, catalytic TERM 659 556131 - 556171 + g 81 -6.7 -4.7254 | overlap 556133 556134 CCGATCATGATGGCG TAGGTGGCCCGGCTCAATC CGG GGTTGAGCCGAGCGGCGTC TTTTTCCTGCGCGGT TERM 660 556133 - 556169 + g 76 -9.3 -3.98256 | overlap 556131 556134 GATCATGATGGCGTA GGTGGCCCGGCTCAATC CGG GGTTGAGCCGAGCGGCG TCTTTTTCCTGCGCG TERM 661 556134 - 556168 + g 71 -12.8 -2.98472 | overlap 556133 556131 ATCATGATGGCGTAG GTGGCCCGGCTCAATC CGG GGTTGAGCCGAGCGGC GTCTTTTTCCTGCGC TERM 662 556277 - 556256 - G 70 -7.9 -4.07885 | CAGCTGCTCGTAAAA GCCGCTCGC CGAG GCGATCGAC TGCAGCAGCCTGAGC TERM 663 556869 - 556898 + g 76 -9.3 -4.08216 | gap 1, overlap 556857 TTGCTGGCCGCCTTG GGCC-GGTTGGC TTCCAGC GCCAGCCTGGCC TTTTGCCAGACATCG TERM 664 557026 - 557036 + g 74 -4.6 -4.66953 | overlap 557019 557015 CCGACAGGCGCGCGT CCTG CGT CGGG TTTTTCAGGTGTTCG TERM 665 557147 - 557120 - G 83 -12 -4.08216 | gap 1, opp_overlap 557141 557143 GTATTCGGCGGAAAA GCTGGCCCAGTCG CGG CG-CTGGCCCAGC AGCAGCAGCCAGTCG Pnap_0528 557489 - 558127 + | 5-formyltetrahydrofolate cyclo-ligase Pnap_0529 559257 - 558214 - | LysR family transcriptional regulator TERM 666 558342 - 558295 - G 76 -8.9 -4.11692 | overlap 558296 GATCCAGCTGCAAAA CGCCTGCACCTCGGGCCGTGC GGCATT GCGCGGCCCGACGATCAGCCA GTAAGCCATCGGCGA TERM 667 558939 - 558983 + g 79 -16.4 -2.52464 | opp_overlap 558934 558933 CGCCATCAATGCGCT CCAGCGAGGGCAGCACGGC-GC GCA GCAGCTGCGC-GCCCGCGCTGG TGAGTTCGACAGCCC TERM 668 559291 - 559314 + H 82 -5.2 -5.00884 | overlap 559292 GGCCCGATCATGGTT GCCTGGGAGA CTGA TTTCCCGGGA TTTTTTGGAGAACAT Pnap_0530 559331 - 559792 + | hypothetical protein Pnap_0531 560221 - 559817 - | BLUF domain-containing protein TERM 669 560356 - 560379 + G 70 -10.3 -3.54129 | opp_overlap 560373 ACCTCCGTGTAAGGC GTGCCGGTT GCGAAA AACCGGCGC TTTCACCCCGGTGTC TERM 670 560390 - 560373 - g 74 -4.7 -4.56597 | opp_overlap 560356 GCCGGTTGCGAAAAA CCGGCGC TTTC ACCCCGG TGTCCGCCGACGAAA Pnap_0532 560234 - 561064 + | cyclic nucleotide-binding protein TERM 671 561040 - 561056 + F 85 -9.3 -4.4715 | CTACTACGATGCGCC GCTGCGC AGG GCGCCGC TTTTATAGCTTGCGG TERM 672 561285 - 561248 - g 71 -5.6 -4.26076 | gap 3, opp_overlap 561266, overlap 561232 561251 GCACGCGGATGAAAA GCAGCCTGCCCAA--GGTG CTG CACCGGCTGGGCGGGC-GC GCCCTGCTGGCGCAT TERM 673 561266 - 561299 + G 78 -15.9 -2.79796 | opp_overlap 561251 561248 GCCTGCCCAAGGTGC TGCACCGGCTGGGCG GGCG CGCCCTGCTGGCGCA TGTGCTGGACTGCGC Pnap_0533 561187 - 562608 + | UDP-N-acetylglucosamine pyrophosphorylase TERM 674 562697 - 562720 + T 90 -8.1 -4.78077 | overlap 562699 GTGGTTGGGCTGGCC GGGAGTCGC CCGGCA GCGACTCAC TTTCTTTTGCTTCGC TERM 675 562982 - 562957 - T 72 -11.1 -3.0976 | opp_overlap 562965, overlap 562964 CCTAACAGCCGAATA CGCAGAACGCG CAAG CGCGCTCTGCT CCCCGCTTCCGAATC TERM 676 563091 - 563102 + T 74 -7.2 -4.09685 | overlap 563090 CGAAGGCGAGTTTGC GCGG ACCC CCGC TTTTGCGGCGTAGCG TERM 677 563141 - 563162 + T 77 -4.4 -4.9448 | gap 1, overlap 563141 563157 CCGAAGCGAAGCGCA GG-GACTCG GACTG CGGGTCGCC TTTTCTTTGGTGACT Pnap_0535 563771 - 563289 - | AsnC family transcriptional regulator TERM 678 564751 - 564712 - g 72 -7.9 -4.22524 | overlap 564707 564713 ACATGCAAAAGGAAA TCTTCGAGCA-GCCGCGCG CCAT CGC-CGACACGCTCGAAGG CGTCAACGGCATCGT Pnap_0536 563910 - 565766 + | D-fructose-6-phosphate amidotransferase Pnap_0537 566455 - 565874 - | transposase, IS4 family protein TERM 679 566645 - 566695 + H 93 -10.6 -4.43309 | overlap 566646 CTGGCCGAAACGGGT GATT-GCATCACTGCCGCAGCGCT CAAGA AGCG-TGCGGCGGTCATGCGAAGC TTTTCCTTGAGCTTG TERM 680 566646 - 566693 + H 71 -12.1 -2.54434 | gap 1, overlap 566645 TGGCCGAAACGGGTG ATTGCATCACTGCCGCAGCGCT CAAGA AGCG-TGCGGCGGTCATGCGAA GCTTTTCCTTGAGCT Pnap_0538 566895 - 567371 + | rhodanese domain-containing protein Pnap_0539 567423 - 568349 + | Serine O-acetyltransferase Pnap_0540 568346 - 568618 + | helix-turn-helix domain-containing protein Pnap_0541 570121 - 568766 - | putative transposase TERM 681 568892 - 568902 + g 95 -3.2 -5.77853 | GGCGGTCCCGGTGCA TTGG ATG CCAG TTTTTTTTCCCGCTT Pnap_0542 570177 - 571058 + | hypothetical protein TERM 682 571846 - 571890 + G 88 -15 -3.70902 | gap 1, overlap 571862 571863 GCCCGCCAAGCCCGC GCCGCATGCGGTCGAGCCGCT GGCG GGCCGCTCGGC-GCATCCGGC TTTCGATGTGCAGGC TERM 683 571985 - 572019 + G 74 -4.8 -4.56597 | opp_overlap 571990, overlap 571987 571992 AACGCCGCCACGACG CACAAGCCGCAGTCGG TGA TCGACCGCGTCTCGTA TTTTTACGAGCACGA Pnap_0543 571073 - 573112 + | SufS subfamily cysteine desulfurase TERM 684 573094 - 573125 + F 100 -7.8 -5.44119 | opp_overlap 573116, overlap 573077 573120 573121 GAAGCGGCTGGCGGA CCAGCGGCGCACGT TTTA ACGACCGCTGCCGG TTTTTTTGCGCTCCG TERM 685 573120 - 573157 + F 95 -15.1 -3.29511 | gap 1, opp_overlap 573116 573154, overlap 573094 573121 CGTTTTAACGACCGC TGCCGGTTTTTTTGCGCT CCG AG-GCGAAAAAACCGGCG TTCTGACGACATGCC TERM 686 573121 - 573156 + F 89 -16.4 -2.57564 | gap 1, opp_overlap 573116 573154, overlap 573094 573120 GTTTTAACGACCGCT GCCGGTTTTTTTGCGCT CCG AG-GCGAAAAAACCGGC GTTCTGACGACATGC Pnap_0544 573413 - 574417 + | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 687 574941 - 574972 + G 83 -5 -5.04385 | gap 1, overlap 574961 CTGGGTATTGACGAG GCGCCGAAGATCGTT CTG ATCGC-CATCGGCGC TTTTTTCCCGGTCTA Pnap_0545 574425 - 575354 + | binding-protein-dependent transport systems inner membrane component Pnap_0546 575351 - 576088 + | ABC transporter related TERM 688 576404 - 576441 + F 78 -7 -4.61566 | overlap 576402 CCGTGCGTCGGCGGG TGCCGTGCAACTGTTG CCCAGC CAACAGTTGATCAGCA TTTTGTGGTTTCGGC TERM 689 577439 - 577419 - g 77 -12.5 -3.62096 | GGCCACGAGGTCAAA CAGGCCGGC AAG GCCAGCCCG GAAGGCGAGGGCAAT Pnap_0547 576594 - 577703 + | luciferase family protein TERM 690 577878 - 577907 + G 70 -7.9 -4.08692 | gap 2 AGCTGACGAGGTTCA CCGTCTGGCCACG GCGCTG CG-GGCCAG-CGG TTTTGCCGAGGGTTC TERM 691 578251 - 578264 + G 78 -5.2 -4.77757 | CCGGTGCAAGCGCAT GCCG AGCGCA CGGC TTTTGCTTTTTACAG Pnap_0548 577720 - 578931 + | long-chain-fatty-acid--CoA ligase-related protein TERM 692 579690 - 579670 - g 72 -4.5 -4.58663 | overlap 579671 ACTACGGCCGAAAAA TCGGCGACG GCA CGCCGCAGG AGGTGCGCTCCAACC Pnap_0549 578946 - 579743 + | ABC transporter related Pnap_0550 579765 - 580646 + | inner-membrane translocator TERM 693 581345 - 581369 + G 81 -6.4 -4.73388 | gap 1, opp_overlap 581341 GCTGCTCAAGACCAA GCTGCT-GGCG TTTG CGCTGAGCGGC TTTTTCCTCGGCATT TERM 694 581690 - 581726 + G 100 -4.9 -5.51402 | overlap 581694 581694 CCTGTGGCAGCGTTT TCGAGAGCGCGTCCGCC TGT GGCCGTTGCGCTACTGA TTTTTTTAGCTCTGT Pnap_0551 580659 - 581726 + | inner-membrane translocator TERM 695 582079 - 582059 - g 78 -3.1 -5.03145 | overlap 582048 582060 GAACGCCTGAAAAAA GGCCTGAAC GGC GCTCCGGCG GCGGCCACCAACCCG TERM 696 583080 - 583070 - g 80 -4.6 -4.87291 | overlap 583071 583074 TACGCCAAGGAAAAA GGCA TCA CGCC GCGTGACTGCGGCAA Pnap_0552 581780 - 583105 + | hypothetical protein TERM 697 584417 - 584380 - g 76 -14.1 -3.14564 | overlap 584362 CGACTGGGTGATCAA CGGCACCGAACCGCC TTACGTCT GGCAGATCGGCGCCG GCACGCCAGGCAAAT Pnap_0553 583193 - 584434 + | acyl-CoA dehydrogenase type 2 Pnap_0554 584498 - 585751 + | acyl-CoA dehydrogenase type 2 Pnap_0555 586010 - 586771 + | ABC transporter related Pnap_0556 587915 - 586812 - | response regulator receiver protein TERM 698 586983 - 587000 + g 72 -2.6 -4.72272 | overlap 586978 586971 GCGGTAGGCGGTGCC GAGCAG CACTTC CTGCAC TTTTTCATGCAGCGC TERM 699 587619 - 587630 + g 73 -3.6 -4.72272 | opp_overlap 587612, overlap 587612 GGAACTCAGCGCGCC GGTG AACG CGCC TTTTTCGTGGCCGAA Pnap_0557 589119 - 587932 - | acyl-CoA dehydrogenase type 2 TERM 700 588130 - 588174 + g 88 -16.4 -3.25823 | gap 1, overlap 588131 588142 588162 GAGCCCGCAGCGGGT GGCGGCGACCTTGGCGGTGGC GATG GCCACGGCC-AGGTGGCCGCG TTCCTCTGCGCCCAG TERM 701 588131 - 588173 + g 90 -19.9 -2.55351 | gap 1, overlap 588130 588142 588162 AGCCCGCAGCGGGTG GCGGCGACCTTGGCGGTGGC GATG GCCACGGCC-AGGTGGCCGC GTTCCTCTGCGCCCA Pnap_0558 589761 - 589201 - | FMN reductase TERM 702 589561 - 589584 + g 72 -12.4 -3.33696 | CTCGATGGCGCGCAG CTCGCGCTCG ACGG CGGGCGTGAG TTCCTTGCGCGACAG Pnap_0559 589793 - 590053 + | hypothetical protein TERM 703 590340 - 590356 + F 81 -3.5 -5.14563 | opp_overlap 590331 590330 590307 ACGAAGGCGCAATGG CGCGGCG CGC CGACACG TTTTTTCATGCGCCG TERM 704 591176 - 591122 - g 83 -9.1 -4.36914 | opp_overlap 591151, overlap 591123 591151 591153 CCGTCGCCGAGAAAA TCGCCGATGTGCGCCGCCGCG-CCGAA AAA TACGGGCGCA-CGGTGCGCTTCGGCGT ACGCCTGCATGTCAT TERM 705 591175 - 591123 - g 73 -12.6 -3.21934 | opp_overlap 591151, overlap 591122 591151 591153 CGTCGCCGAGAAAAT CGCCGATGTGCGCCGCCGCG-CCGAA AAA TACGGGCGCA-CGGTGCGCTTCGGCG TACGCCTGCATGTCA TERM 706 591185 - 591151 - g 72 -4.1 -4.56597 | opp_overlap 591151, overlap 591123 591122 591153 CGCCGCGCCGAAAAA TACGGGCGCACGGTG CGCTT CGGCGTACGCCTGCA TGTCATCGTCCGCGA Pnap_0560 590500 - 591714 + | alkanesulfonate monooxygenase Pnap_0561 591711 - 592562 + | amidohydrolase 2 Pnap_0562 592589 - 593578 + | cysteine synthase A TERM 707 593675 - 593685 + F 70 -5.4 -4.41844 | opp_overlap 593659 593662, overlap 593663 593662 AACGCATCGCACTTA TTGC GTT GCAA TTTTCTGGAGCTTTT Pnap_0563 593702 - 594727 + | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 708 595192 - 595134 - g 71 -9.4 -3.72576 | gap 1, overlap 595135 595186 TGTTTCTCGATGAAA TTGGCG-ACTTGCCGCTGGCGCTGCAG GTCAAG CTGCTGCGCGTGCTGCAAGAGCGCCAG ATCGTGCGCATCGGC TERM 709 595191 - 595135 - g 70 -12.9 -2.83403 | gap 1, overlap 595134 595186 GTTTCTCGATGAAAT TGGCG-ACTTGCCGCTGGCGCTGCAG GTCAAG CTGCTGCGCGTGCTGCAAGAGCGCCA GATCGTGCGCATCGG Pnap_0564 594770 - 595945 + | sigma-54 dependent trancsriptional regulator TERM 710 597435 - 597452 + G 79 -8.4 -4.26076 | overlap 597429 CGCTGACGCAGCCGG CGGCCA TTTTGC TGGCCG TTTTCCTCACCCTGG Pnap_0565 596039 - 598219 + | thiol:disulfide interchange protein, putative Pnap_0566 599864 - 598299 - | RND efflux system outer membrane lipoprotein TERM 711 598977 - 599012 + g 91 -16.8 -3.55563 | overlap 598968 GGCCGGCGTGCCGAC CAGCGTGGCCAGCGCG TGTT CGAGCTGCCCGCGCTG TTTGCGCAATAAGGT TERM 712 599214 - 599199 - G 88 -7.5 -4.87803 | overlap 599201 CAGCGTGAAATAAAA CGCCG CCAGAT CGGCG CTGAGCACCAGTTGC TERM 713 599807 - 599770 - G 78 -14.9 -3.09273 | CCCGCCCAAGACAGA CGCAGGCGCCAGC GGCCTTGACAGT GCTGGCGCCCGCG TTGCCCTCTCCCCAC Pnap_0567 601135 - 599861 - | RND family efflux transporter MFP subunit TERM 714 599907 - 599935 + g 74 -12.3 -3.53343 | overlap 599908 599913 599931 CCGTCAGCCTTGGCC TCGGCAGGGCGCG AGG CGCCGCCTGCCGG TTTCGGCACCGGCTT TERM 715 599908 - 599934 + g 72 -13.6 -2.71791 | overlap 599907 599913 599931 CGTCAGCCTTGGCCT CGGCAGGGCGCG AGG CGCCGCCTGCCG GTTTCGGCACCGGCT TERM 716 600781 - 600797 + g 75 -3.6 -4.84529 | overlap 600773 CGGGCGTGTCGATCA GGGCCA GCAGA TCGCCC TTTTTCACTTTGTCG Pnap_0568 604357 - 601160 - | acriflavin resistance protein TERM 717 601739 - 601703 - G 85 -10.1 -4.28994 | opp_overlap 601703 601702 601705 GATCAGCGAGGAAAA CGCCGTGCGCAGC GTCTCGATCTG GCCGCGCACGGTG ATTTCGGAGCCGCGC TERM 718 602405 - 602376 - G 78 -9.9 -4.08216 | gap 1, overlap 602377 TCATTGCCCGGAAAA TCGCGCGCCA-GCG TCT CGCGCAGCGCGCGG ATATGGCCCTGCGTG TERM 719 602404 - 602377 - G 75 -13.4 -3.04715 | gap 1, overlap 602376 CATTGCCCGGAAAAT CGCGCGCCA-GCG TCT CGCGCAGCGCGCG GATATGGCCCTGCGT TERM 720 602749 - 602733 - G 72 -4.3 -4.54477 | overlap 602734 602744 602747 GCAAAAGCCATAAAA CCGCTGC CAA ACAGCGC CTTGCGCTGCAGCAG TERM 721 602758 - 602744 - G 73 -11.4 -3.55203 | overlap 602734 602733 602747 AAAACCGCTGCCAAA CAGCGC CTT GCGCTG CAGCAGGGCCGCCAG TERM 722 603476 - 603494 + g 76 -5.8 -4.57073 | overlap 603478 GGTGTCGATGATGTC CAGCGTCG AGG CGCCGCCG TTTTTCAGCACCGTC TERM 723 604429 - 604393 - R 70 -3.4 -4.68593 | opp_overlap 604392 604393 604414, overlap 604395 604396 GCCATCAGTCAAAAA GAGGGGCGGGCAGGGC GGGAA GCCTTGCCCGTTCGGC ATTGCTTACCTGGCA TERM 724 604576 - 604556 - R 100 -15.5 -4.81083 | opp_overlap 604572 GTTAAGTAGCAAAAA CCATCACGC GTC GCGTGATGG GCGCGTCGCCTCAAT Pnap_0569 605063 - 604587 - | cytochrome c, class II Pnap_0570 606154 - 605150 - | SMP-30/gluconolaconase/LRE domain-containing protein TERM 725 605182 - 605228 + g 76 -6.2 -4.62069 | opp_overlap 605172, overlap 605184 605185 CATAACCGGCAGTCA GCACCGGCAGGCGGTAGGCCGC ACC GCGCCCCACCGCGTACAGGGTC TTTTTGCGCTCGCCG TERM 726 606124 - 606100 - G 78 -6.4 -4.65895 | gap 1, overlap 606102 CTGCCGAGGCAAAAA CT-CCGGCCAC ACTG GCGGCCAGCAG GGCGCGGCCAAGGAT Pnap_0571 606791 - 606183 - | redoxin domain-containing protein Pnap_0572 607506 - 606823 - | cytochrome c, class I Pnap_0573 607935 - 607522 - | hypothetical protein TERM 727 607725 - 607751 + g 86 -7.8 -4.7078 | overlap 607732 GCGTGAACATGCGGT GCAACTCGGCCG CCT CGGCCTTGCTGC TTTTTCCATCCTTCA TERM 728 607927 - 607945 + g 73 -13.1 -3.18239 | ATTCCTTCCAGCGGG GCGGGGC ATTAC GCCCCGC TTCCTCGGCTATGTA Pnap_0574 609417 - 607966 - | hypothetical protein TERM 729 608008 - 608026 + g 70 -10.2 -3.61715 | opp_overlap 608004 GCCGTACACCACCGT CGGGCGCT CGG AGCGGCCG TTGTTCAGGAAGGTG Pnap_0575 611803 - 609455 - | hypothetical protein TERM 730 611184 - 611217 + g 81 -11.7 -3.86194 | gap 1, overlap 611167 TTGTCGGGGTAGCCG GCCAGGAAGCCGGTGG CAA TC-CTGGCGTCCTGGC TTTCTGGCCAGAGTT TERM 731 611838 - 611823 - H 80 -4.8 -5.0538 | GTGTACCCCAAAAAA CATAAA TCGA TTTATG CATTTACTTACTCCA TERM 732 612679 - 612649 - g 71 -11.1 -3.40299 | gap 1, opp_overlap 612661 612673, overlap 612642 612650 CTACGACATCCAGAA TCCGGAGGCGC-CG CCGT CGAGCGCCTCCAGC GGCTTCGGTCCGACC TERM 733 612678 - 612650 - g 74 -14.6 -2.63858 | gap 1, opp_overlap 612661 612673, overlap 612642 612649 TACGACATCCAGAAT CCGGAGGCGC-CG CCGT CGAGCGCCTCCAG CGGCTTCGGTCCGAC Pnap_0576 612254 - 613768 + | hypothetical protein TERM 734 614784 - 614751 - g 81 -11.7 -3.91541 | opp_overlap 614769, overlap 614754 CGAGGAAACCAAGAA GTACAAGCTGACCCG CAGG CCGGTCAGCCTGGAC GGCTGGTTAGAGCCC TERM 735 614860 - 614814 - g 70 -10.1 -3.66732 | gap 1, opp_overlap 614844, overlap 614844 CAAGTACCTCAACAA CGCCCTGCGCGAGC-TGAAGCT GGAG AACTACTGGCCCACGCAGGACG CGGCGGGCAAGTTCA Pnap_0577 613798 - 614886 + | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein TERM 736 615660 - 615678 + G 88 -8.1 -4.7373 | TGTCGAGCTGCTCTC GTCCAGC GAAGG GCTGGGC TTTTTCATGGCCTAC TERM 737 615784 - 615818 + G 72 -2.6 -4.74103 | overlap 615785 615786 CTGGGCCTGCGCCTG ATTGAGTCGCGCCTGC AAG GCTGGCGCCGTTCGGC TTTTTGACTTGCCAA Pnap_0578 614962 - 615825 + | binding-protein-dependent transport systems inner membrane component TERM 738 616625 - 616668 + G 73 -6.6 -4.25256 | overlap 616623 CGCGGCCGTGGCCGA GCGCCGC-CTGCTGCGCTGG CGCGCC CCAGCGC-GCTGAGCCGCCC TTCTTTTCATGCCCA Pnap_0579 615843 - 616661 + | binding-protein-dependent transport systems inner membrane component Pnap_0580 616721 - 617518 + | ABC transporter related TERM 739 617728 - 617751 + G 81 -6.7 -4.72272 | GCCCCGGTGTCAGCC GCTGAAGCG GCCAAA CTCTTCAGC TTTTTCATCACCAGC Pnap_0581 617587 - 618333 + | hypothetical protein TERM 740 618353 - 618379 + T 100 -17.3 -5.03314 | gap 1, opp_overlap 618340, overlap 618368 618369 618369 AGGGGGAGCCTCGCA GGCCCGGCGACC GCAA GG-CGCCGGGCC TTTTTTAGGGCTGCG TERM 741 618368 - 618401 + T 81 -3.8 -5.23016 | gap 2, overlap 618353 618369 618369 GGCCCGGCGACCGCA AG-GCGCCG-GGCCTT TTTT AGGGCTGCGGCGCACA TTTTTTAAGTTATTT Pnap_0582 619172 - 618504 - | TPR repeat-containing protein Pnap_0583 619570 - 619169 - | cytochrome C biogenesis protein TERM 742 619258 - 619243 - G 71 -6 -4.26076 | overlap 619244 619246 GCACCTTGACGAAAA GCAGGC CCAG GCCGGC GAGCAGCATCGCCAG TERM 743 619387 - 619406 + g 83 -7.8 -4.62783 | overlap 619374 CCGATGCGCCTGCGG CCAGCTGC TCGC GCACCTGG TTTTTCAGGTCGATG Pnap_0584 620090 - 619563 - | periplasmic protein thiol--disulphide oxidoreductase DsbE TERM 744 619695 - 619674 - G 71 -8.7 -3.96148 | CTTGTCGATCACAAA GGTTTCCGG CACG CCGTAAACC CCGTAGTCAATGCCG Pnap_0585 622096 - 620099 - | cytochrome c-type biogenesis protein CcmF TERM 745 621103 - 621075 - G 72 -8 -4.20712 | gap 1, overlap 621067 621065 GAGAACAGGGCAAAA CGCCCTCCCAGGC CGAC GCC-GGGCGCGCG CCAGGCGTAGAGCGC Pnap_0586 622542 - 622093 - | CcmE/CycJ protein Pnap_0587 623506 - 622718 - | heme exporter protein CcmC TERM 746 622891 - 622924 + g 71 -11.1 -3.53224 | gap 1, opp_overlap 622899 GTGCACTGCTCAGGC TGATGGAAGCGCCCTG GTG CAGGGTG-TTCCACCA TTTCACCGAGAAGTA TERM 747 623434 - 623421 - G 72 -3.7 -4.58395 | GCCAGCGGGTAAAAA GCGGG GGCG CCAGC GTACTTCCACCAGCC Pnap_0588 624198 - 623530 - | heme exporter protein CcmB Pnap_0589 624836 - 624192 - | heme exporter protein CcmA TERM 748 624509 - 624543 + g 73 -8.4 -4.07885 | CCTGTTGTTCTTCAA CCGCCTGCCCGGCG ATGCGCG CGCCGAGCAGCAGG TTTTCCGCCGCCGTC Pnap_0590 625630 - 624830 - | cytochrome B561 TERM 749 624964 - 624983 + g 76 -7.8 -4.25283 | opp_overlap 624954 624958 CAAATGCAATCGCGC CGCCTTTG CGGC CGGAGGCG TTTTGATGAGCCGCT Pnap_0591 626110 - 625646 - | hypothetical protein TERM 750 626237 - 626216 - R 70 -9.4 -3.65046 | CTCCTACCGCAATAA GCGCGCCA TTGTTG TGACGCGC CATCTTCCCAGTGAA Pnap_0593 627113 - 626748 - | transposase, IS4 family protein Pnap_0594 628640 - 627285 - | putative transposase TERM 751 627411 - 627421 + g 95 -3.2 -5.77853 | GGCGGTCCCGGTGCA TTGG ATG CCAG TTTTTTTTCCCGCTT Pnap_0595 628997 - 629239 + | phage tail collar domain-containing protein Pnap_0596 629572 - 629270 - | hypothetical protein TERM 752 629384 - 629348 - G 74 -2.2 -4.84311 | gap 1 TGTGACATAACAAAA CGCCTCCTTTTTCGACC CTCT GTTCGAACC-GGAGACG CCCTGGGCGCGCAGA Pnap_0597 629705 - 630034 + | hypothetical protein TERM 753 630557 - 630539 - g 70 -11.7 -3.21099 | TCTTCCCAGCATCAA CGCGACG GGGTT CGTCGCG GCTGGATGCCACGGC Pnap_0598 630162 - 631676 + | FAD linked oxidase domain-containing protein Pnap_0599 632685 - 631708 - | hypothetical protein Pnap_0600 633355 - 632717 - | dimethylmenaquinone methyltransferase Pnap_0601 634260 - 633394 - | 6-phosphogluconate dehydrogenase, NAD-binding Pnap_0602 634463 - 635125 + | GntR family transcriptional regulator Pnap_0603 635624 - 635157 - | MarR family transcriptional regulator TERM 754 635503 - 635464 - G 72 -2.1 -4.69664 | gap 1, overlap 635447 635468 GACAGCATCGAAAAA TCGACGATGCGCAAGTCA TACGG CGCCATGCGCACCAT-GA ACACTTCAACAATCG Pnap_0604 636760 - 635771 - | hypothetical protein TERM 755 636536 - 636548 + g 74 -10.5 -3.78934 | overlap 636542 CAGGGCAATGCGCCC GCCCG CGC CGGGC TTGTTCTCGACGACC TERM 756 636579 - 636595 + g 76 -5.7 -4.56597 | overlap 636580 636581 GCGGCATTTTTGGTG TAGGCCG AGC CGGCCAG TTTTTCACCCACGCG TERM 757 637032 - 637047 + r 73 -5.4 -4.62471 | opp_overlap 637021 AAAGCGAAAAAGCCG GTCAGT CCTT GCTGAC TTTTTCGGCCTTGCC Pnap_0605 637815 - 637033 - | enoyl-CoA hydratase TERM 758 637424 - 637401 - G 77 -4.4 -4.82901 | overlap 637402 CGCCGCCGACAAAAA TGCCGCGCGA GCCT TCGGGCAGCG CGTAGAAGGTGGTTT TERM 759 637905 - 637933 + H 71 -10.2 -3.17075 | TGGTATTTACCCCTA GCCTTGGCCGGT GCCGG ACCGGCCCACGC TTCGCTTCAACGCAC Pnap_0606 637966 - 638841 + | amidohydrolase 2 TERM 760 638854 - 638889 + T 95 -15.4 -3.53811 | opp_overlap 638861, overlap 638858 638860 638861 TGAAGCCGGCCCTTA CGAAAAACGCCGGGGC ACAG GCCCCGGCGATGTTTG TTTGGCAAAACTGGC TERM 761 638858 - 638885 + T 100 -12.6 -4.41348 | opp_overlap 638861, overlap 638854 638860 638861 GCCGGCCCTTACGAA AAACGCCGGGGC ACAG GCCCCGGCGATG TTTGTTTGGCAAAAC TERM 762 638860 - 638883 + T 100 -15.2 -3.81557 | opp_overlap 638861, overlap 638858 638854 638861 CGGCCCTTACGAAAA ACGCCGGGGC ACAG GCCCCGGCGA TGTTTGTTTGGCAAA TERM 763 638861 - 638882 + T 100 -18.7 -2.88452 | opp_overlap 638861, overlap 638860 638858 638854 GGCCCTTACGAAAAA CGCCGGGGC ACAG GCCCCGGCG ATGTTTGTTTGGCAA TERM 764 638882 - 638861 - T 100 -18.7 -4.72272 | opp_overlap 638860 638858 638854 638861 GGCCCTTACGAAAAA CGCCGGGGC ACAG GCCCCGGCG ATGTTTGTTTGGCAA Pnap_0607 639954 - 638908 - | helix-turn-helix domain-containing protein TERM 765 640156 - 640182 + H 74 -7.2 -4.20696 | gap 1, opp_overlap 640137 GTCAAGTGTGTCATG GCCGGGCAAGC CCGAAA GCA-GCCCGGC TTTTACGCTTCATGC TERM 766 641169 - 641153 - g 77 -2.2 -5.03715 | ATCAGCCCGAAAAAA GCCTTG TGGAT CAACGC CTACACCGAAAGCAT Pnap_0608 640253 - 641245 + | hypothetical protein Pnap_0609 641306 - 642568 + | major facilitator superfamily transporter TERM 767 643203 - 643246 + G 72 -7.5 -4.11394 | gap 3, opp_overlap 643174, overlap 643234 GGCTCCGAACTCTGC CCGGCCACGCACAGGATG-ATC GTT GATGCGTTC-GAGCG-GGCCGG TTTTCCGGCTGGCGT TERM 768 643424 - 643439 + G 70 -7.5 -3.99324 | GGCCCTGCTGGAACT CGGCG GAAAGG CGCCG TTTGTGGTGCTGGAC TERM 769 643487 - 643499 + G 81 -6.9 -4.74103 | overlap 643473 643475 GGCCGCCGATGCTGC GGCGT TTG GCGCC TTTTTGCATTCAGGC Pnap_0610 642669 - 644111 + | aldehyde dehydrogenase TERM 770 644151 - 644163 + F 71 -4.7 -4.56597 | overlap 644152 GCATCCCGCCCACGC CGGGC GGT GCCCA TTTTTCAAACAGGAG Pnap_0611 644191 - 645636 + | carotenoid oxygenase TERM 771 645644 - 645676 + T 91 -14.2 -3.01712 | ACGTCTGAGTCTGAA GGCGGCCGGGC-GTCA ATC TGGCCGCCCGGC-GCC TGTTGCCAGAGCCGG Pnap_0612 647002 - 645800 - | branched-chain amino acid ABC transporter periplasmic substrate-binding protein TERM 772 646246 - 646260 + g 100 -4.2 -5.40072 | opp_overlap 646240 GAAACACCAGGGGAA TGTTGC CCG GCATCA TTTTTTTGCCCACAC TERM 773 646312 - 646296 - G 73 -2.9 -4.69027 | overlap 646298 AAACGCACCGAAAAA TCTTCCG TCC CGGCAAA CACAATCGCCTCGCA TERM 774 646686 - 646674 - G 91 -9.1 -4.42619 | overlap 646627 646676 GAACACTCCAGAAAA CTGGC CCC GCCAG CCAGCGCCACAACCT TERM 775 646874 - 646856 - G 78 -11.6 -3.68351 | TCCGGATGACGCAAA GTCGGCCG GTC CGGCCGTC AGCGTGCTGATCGCA TERM 776 647186 - 647207 + r 93 -15.9 -3.14564 | CTGGATTTGACATCC TCCCCTCCC TAAA GGGAGGGGA TTCCTGCGGCGCTAC Pnap_0613 648454 - 647219 - | IS605 family transposase OrfB TERM 777 647668 - 647681 + g 75 -3.8 -4.7373 | GCAAGTCTTCGACAG CCAC CATCGC GTGG TTTTTACTGAGGTCG TERM 778 647778 - 647789 + g 72 -2.2 -4.81249 | CTTTTGGCTTTGTGC CAGT TCCG GCTG TTTTTGACTTTGCGG TERM 779 648433 - 648453 + g 100 -6.2 -5.64873 | gap 1 GCATCAGCTCGAATT TGAAG-GCC TGGA GGCGCTTCA TTTTTTCTTGTTCAG TERM 780 649355 - 649385 + G 78 -3.1 -5.03314 | CGCCTGCTTCCTGCG CAGCGACAGCCTG CACCA CGCGCTGGCCCTG TTTTTTGCGCCTGCA Pnap_0614 648849 - 649673 + | glyoxalase/bleomycin resistance protein/dioxygenase Pnap_0615 649701 - 650486 + | helix-turn-helix, type 11 domain-containing protein TERM 781 652197 - 652214 + G 84 -4 -5.19261 | overlap 652198 CAGCCCAGGGTTCCC ACGCGG CGCAGA CCGCGA TTTTTTCATAAATTT Pnap_0616 650483 - 652225 + | 3-(3-hydroxyphenyl)propionate hydroxylase TERM 782 652510 - 652463 - g 70 -9.8 -3.55071 | gap 1, opp_overlap 652464 652494, overlap 652464 CGACAGGTTGTCAAA GCTCTGG-AGCCAGCCGGTCATC GTG GACAACCGGCCGGGTGCCAGCGG TTTCATCGCGATTCA TERM 783 652998 - 652949 - g 78 -6.7 -4.56597 | opp_overlap 652959 GCGCGCCGGCAAAAA CCGCTACCTGGCCGTCGCCGCGC CCAA GCGCGTCGCCGGCTTTGCGGAGG TGCCGACGATTGCCG TERM 784 652959 - 652988 + G 91 -16.3 -3.54424 | opp_overlap 652949 AAAAACCGCTACCTG GCCGTCGCCGCGC CCAA GCGCGTCGCCGGC TTTGCGGAGGTGCCG Pnap_0617 652245 - 653270 + | hypothetical protein Pnap_0618 653369 - 654217 + | 5-carboxymethyl-2-hydroxymuconate delta-isomerase Pnap_0619 656124 - 654289 - | putative flavoprotein involved in K+ transport TERM 785 654985 - 655036 + g 76 -9.5 -4.08216 | gap 3, overlap 655028 GTCCATCAGCGAGTC CGAGCGCACGATGTGCGTCGAGCTGC GCT GCAGCATGGT-CACGTCG-GCGC-CG TTTTCCCACAGGTCG TERM 786 656170 - 656152 - R 72 -12.4 -2.73124 | overlap 656151 TGCTATGTTGCAAAT CGCCGGCA GGG TGCCGACG CAACAGTCATTGCAA Pnap_0620 658334 - 656373 - | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 787 657322 - 657285 - G 73 -12.5 -3.21912 | overlap 657286 GGGCGAATTGACGAA GCGCGCCGCCCGCGCGA TCTG CCGCGCCAGCGCCGCGT CGCCCCCGCACAGCG TERM 788 657321 - 657286 - G 79 -16 -2.52933 | overlap 657285 GGCGAATTGACGAAG CGCGCCGCCCGCGCGA TCTG CCGCGCCAGCGCCGCG TCGCCCCCGCACAGC TERM 789 657504 - 657483 - G 76 -5.7 -4.57569 | overlap 657484 GCAGCTGTGCAAAAA GCGGCCCAG GTCG CCGAGCCGG GCGTTGAACAGGCGC Pnap_0621 658904 - 658482 - | HxlR family transcriptional regulator TERM 790 659698 - 659678 - g 76 -9 -3.96624 | gap 1 GAGGCTGACTACAAA GCCG-CGCT GCTC AGCGTCGGC TTGCCCGAGGGGCTG Pnap_0622 658994 - 659848 + | NmrA family protein Pnap_0623 660162 - 660608 + | DNA/RNA endonuclease G NUC1-like protein Pnap_0624 660757 - 661482 + | deoxyribonuclease I Pnap_0625 662594 - 661587 - | hypothetical protein TERM 791 661694 - 661718 + g 91 -6.3 -5.27335 | TCCCTTCTAACTGTC CCGGCCTTACC ATT GGGAAGTCTGG TTTTTGTTTACCCCA Pnap_0626 663111 - 662650 - | hypothetical protein Pnap_0627 663846 - 663151 - | hypothetical protein TERM 792 663623 - 663635 + g 76 -9.1 -4.07568 | GTCCCTTGCGCGTTG CGCAG ACT CTGCG TTTTCAGGCCCCCAG Pnap_0628 667040 - 663843 - | phage integrase family protein TERM 793 663961 - 663982 + g 86 -8.7 -4.56597 | overlap 663963 CGCAGCGTGGTGCGG CCGTCCATG AGAT CATGGACTG TTTTTGGCCCCAGCC TERM 794 663963 - 663980 + g 76 -9.9 -3.90048 | overlap 663961 CAGCGTGGTGCGGCC GTCCATG AGAT CATGGAC TGTTTTTGGCCCCAG TERM 795 665020 - 665035 + g 73 -6.8 -4.32402 | gap 1, opp_overlap 665018 TGAAGGTCGAACAGT GC-CGCC GAT GGCGCGC TTCTTTTCGTTGAGC Pnap_0629 668359 - 667037 - | phage integrase family protein TERM 796 668474 - 668530 + H 100 -36.2 -2.77013 | gap 1, opp_overlap 668468 668486 668489, overlap 668475 668489 TGATAATATCGAGCG TCTGCCAGCGAACAACCCCGGCACCGG CTCG CCGGTGCCGGGGTTGTTCGCTG-CGGG GTTGTTCACGGGCTA TERM 797 668475 - 668531 + H 100 -34 -3.62046 | gap 1, opp_overlap 668468 668486 668489, overlap 668474 668489 GATAATATCGAGCGT CTGC-CAGCGAACAACCCCGGCACCGG CTCG CCGGTGCCGGGGTTGTTCGCTGCGGGG TTGTTCACGGGCTAG TERM 798 668519 - 668486 - H 100 -28.3 -3.05384 | opp_overlap 668474 668475 668489, overlap 668468 668489 GCGTCTGCCAGCGAA CAACCCCGGCACCGG CTCG CCGGTGCCGGGGTTG TTCGCTGCGGGGTTG TERM 799 668516 - 668489 - H 100 -24.2 -3.67597 | opp_overlap 668489 668474 668475, overlap 668468 668486 TCTGCCAGCGAACAA CCCCGGCACCGG CTCG CCGGTGCCGGGG TTGTTCGCTGCGGGG TERM 800 668489 - 668516 + H 100 -24.2 -3.67597 | opp_overlap 668468 668486 668489, overlap 668474 668475 TCTGCCAGCGAACAA CCCCGGCACCGG CTCG CCGGTGCCGGGG TTGTTCGCTGCGGGG TERM 801 668791 - 668766 - g 76 -12.6 -3.41051 | overlap 668769 CCAGGTGCATGAGAA CAATGCCGGC GTCTGG GCCGGCATCG AGAGCGCGGCCCGGC TERM 802 668788 - 668769 - g 79 -10.7 -3.84406 | overlap 668766 GGTGCATGAGAACAA TGCCGGC GTCTGG GCCGGCA TCGAGAGCGCGGCCC TERM 803 669094 - 669052 - g 81 -11.9 -3.85698 | gap 1, overlap 669053 GGCCTGCCGCAGAAA GTCCGCGACGCGGGCATGGA GCTG CCCAAGCCCGAGTCCCGG-C AAGACCGCAGAAAGA Pnap_0630 668680 - 669192 + | DNA/RNA non-specific endonuclease Pnap_0631 669209 - 669457 + | hypothetical protein Pnap_0632 670280 - 669441 - | hypothetical protein TERM 804 669635 - 669651 + g 79 -9.4 -4.11216 | opp_overlap 669629 ACAAGACCATGGCCA CCAGCG CGGCA CGCTGG TTTTCAACATGCACC Pnap_0633 672060 - 670342 - | sodium/hydrogen exchanger TERM 805 671929 - 671915 - G 95 -12.8 -4.37092 | ATGTCGGCGACAAAA CCCGGC GTC GCCGGG CCGATGAGGATGCCC Pnap_0634 673535 - 672039 - | hypothetical protein TERM 806 672578 - 672558 - G 76 -14 -3.14132 | GCCGTGGGTGATGAA CAGCCGGG GCTGG CCCGGCTG GGTCCACGCCAGCGC TERM 807 672868 - 672856 - G 70 -10.5 -3.53811 | TCGATGCCGTCGAAA GCGGC CAC GCCGC CGTCCAGGCTGACCA TERM 808 672921 - 672973 + g 93 -17 -3.53091 | gap 2, overlap 672899 672924 GTGGCATTCGCGCAC CCG--GCCGCCTTGCTGGCGCAGC GTCCACA GCGGCGCCAGCCGGGCGGCTTCGG TTTCAAGCCAGGCCT TERM 809 672924 - 672968 + g 100 -22.1 -3.27525 | overlap 672899 672921 GCATTCGCGCACCCG GCCGCCTTGCTGGCGCAGC GTCCACA GCGGCGCCAGCCGGGCGGC TTCGGTTTCAAGCCA TERM 810 673893 - 673911 + G 72 -8 -4.1552 | overlap 673904 GCTTGGCATGTACCG GCCCGGTG AGT CGGCGGGC TTTATTGCCGCCGTC Pnap_0635 673732 - 673983 + | transglycosylase-associated protein Pnap_0636 674080 - 674805 + | exsB protein Pnap_0637 676419 - 674809 - | protein of unknown function DUF894, DitE TERM 811 675723 - 675694 - G 85 -3.3 -5.31456 | overlap 675696 GGAATGCAGAAAAAA CAGCGAGATGCGC ACCA GCACCGCCCGCAG CCGGGTGGACTGGCC TERM 812 676039 - 676012 - G 83 -12 -4.10161 | gap 1 CACGATGGCCGAAAA CACCGGCC-AGCG CAT CGCCAGGCCGATG CCGTTGGCAAAGGTC Pnap_0638 678264 - 676432 - | ABC transporter TERM 813 676951 - 676937 - G 76 -9.2 -4.07568 | CTGCCGGTGGCAAAA GGCCAG ATG CCGGCC AGCGCCCGGAACAGC TERM 814 677345 - 677329 - G 76 -5.7 -4.56597 | overlap 677330 GGCGCCGCTGAAAAA GCGCGGC GCC GCCACGA TGAACGGAAACACCA Pnap_0639 679267 - 678287 - | 5-nucleotidase Pnap_0640 679858 - 679304 - | phosphoglycerate mutase Pnap_0641 680699 - 679863 - | cobalamin-5-phosphate synthase CobS TERM 815 679984 - 679966 - G 85 -5.8 -5.02074 | CGACGCCTGAAAAAA CGCAGCAG CCC CAGCAGCG CGAGCACTGAAAAGC Pnap_0642 681760 - 680708 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase TERM 816 680998 - 680966 - GR 80 -11.9 -3.33696 | CGCGCCGGCAATGAA GCCATCGACCAGCAC CAC GCGCCGCTCGCTGGC CGCCTGCAGCATGGC TERM 817 681304 - 681344 + gr 100 -13.3 -4.87291 | gap 1 CTGCCGCGAGCGCCG CCTGCGCCTC-AAGCCGC GACATG GCGGCTTCGTGGCACAGG TTTTTCGTTCCCATG TERM 818 681643 - 681668 + gr 70 -9.7 -3.44206 | gap 1 CCAGGGCTTCGAGCA GGCCGAGCGCGC CCA GCG-GCTTGGTC TTGTGGTCAATCTTG Pnap_0643 681968 - 681723 - | hypothetical protein Pnap_0644 683626 - 681977 - | threonine dehydratase TERM 819 683206 - 683252 + g 70 -7.9 -4.10161 | gap 1 CCGCGTCAATTTTGA GCTGCGGCGTGGTCGTCGGCAT GACG ATGACGGCGCGCGTGCCG-AGC TTTTGCGCGCTCATG TERM 820 683699 - 683676 - H 100 -14.6 -6.09888 | GGGCAAGAAAAAAAA GGCCCAGACC ATGC GGTCTGGACC TATAAATCCACCCTT TERM 821 684110 - 684087 - g 76 -8.8 -4.14392 | gap 1, overlap 684088 CGCCAAGCCTGAAAA CGGCGGCGCCA ATC TTGCGCCGC-G CCCGATGGAAACCGT TERM 822 684151 - 684122 - g 70 -9.9 -3.64703 | gap 1 CGCGCCCGATGGAAA CCGTGCTGGCCGGC GCG GGCGGCT-GCACGG CCTACGACGTGGTGC Pnap_0645 683953 - 684411 + | OsmC family protein Pnap_0646 685054 - 684425 - | putative ubiquinone biosynthesis protein TERM 823 685215 - 685196 - R 100 -13.6 -4.80167 | overlap 685208 685211 GAGGAAAAACGAAAA CAGCCCTC CAAA GAGGGCTG TCAGGCATGACAACG Pnap_0647 686545 - 685250 - | outer membrane protein (porin)-like protein TERM 824 686520 - 686532 + g 70 -7.7 -3.96447 | AGGCCCAGGACAGCG CTTGC AAG GCAAG TTAGTTTTTTCATGC TERM 825 686749 - 686732 - g 82 -3.4 -5.1675 | gap 1, opp_overlap 686732 686733, overlap 686699 686734 GCAGGCACTAAAAAA GA-GCGG GTCTT CCGCGTC GTCTTTTGGGTGATT Pnap_0648 686561 - 686914 + | hypothetical protein Pnap_0649 687116 - 688150 + | porin TERM 826 688158 - 688173 + F 73 -10.4 -3.35867 | opp_overlap 688156 AGTTCTAATTCAACT CTGGCC TGAC GGCCAG TTGCTTGAAGCTTGA TERM 827 688193 - 688216 + F 100 -11 -5.2696 | opp_overlap 688192 688193 TTGAAGCTTGACAAG CCGCTTTGGG GAAA CCTGAAGCGG TTTTTTGCGTTTTAC Pnap_0650 688495 - 689604 + | porin TERM 828 689677 - 689638 - f 100 -16.6 -4.41633 | opp_overlap 689645, overlap 689645 TAGTTTGAAAAAGAA TATAAAACCCCCATCGTG GCGA CACGGTGGGGGTTTTTTA TGGGCTTTGTATTTT TERM 829 689670 - 689645 - f 100 -14.7 -4.90321 | opp_overlap 689645, overlap 689638 AAAAAGAATATAAAA CCCCCATCGTG GCGA CACGGTGGGGG TTTTTTATGGGCTTT TERM 830 689645 - 689670 + F 100 -16.9 -5.28826 | opp_overlap 689645 689638 AAAAAGAATATAAAA CCCCCATCGTG GCGA CACGGTGGGGG TTTTTTATGGGCTTT TERM 831 690264 - 690236 - g 85 -15.4 -3.42996 | overlap 690255 690262 CATGACCGAGCACAA CGAGTTTGGCTG GAAAT CAGCCAAACCCG GCCTGATGCACGGCT TERM 832 691060 - 691088 + G 86 -8.1 -4.65895 | gap 1, opp_overlap 691044, overlap 691070 TCCCTGATGGCCAGG GCGGCTTGACCG GCGGCG CGGGCA-GCCGC TTTTTGCATAACAGC Pnap_0651 689844 - 691187 + | amidohydrolase Pnap_0652 692174 - 691329 - | RpiR family transcriptional regulator TERM 833 691538 - 691566 + g 76 -6 -4.57073 | gap 1 CCAGCGGCGAGGCGG TGGCGGTGACCAC GATG GTGGTGG-CGCCA TTTTTGCGGGCGATG TERM 834 692093 - 692124 + g 71 -13.6 -2.62184 | opp_overlap 692089 692088 GGCTGGCAAAGGCGC GCGGGTCGCTCAGC ACCA GCCGGCCGACCCGC TGCTCTGCCGGGGCC Pnap_0653 693687 - 692176 - | glucose-6-phosphate 1-dehydrogenase TERM 835 692966 - 692995 + g 82 -11.5 -4.07687 | gap 1, overlap 692955 692957 692962 ACCATGTCGCGCAGC GCGCCGGTGTTTTC GTA GAAAGCGCCG-CGC TTTTCCACGCCCAGT TERM 836 693958 - 693923 - g 74 -5.2 -4.57341 | AAGGCGGTGCAAAAA GCCGATTACGCGCCGC TGAT GCGGGACACGGTCGGC CGCTTCAAGGGCCGG Pnap_0654 693791 - 694738 + | transaldolase B TERM 837 695034 - 695054 + G 78 -3.1 -5.06816 | opp_overlap 695027, overlap 695036 CTGATCAACAGCACC GAGCAGCGC GCC GTGATGCAC TTTTTATTGCGAAAT TERM 838 696101 - 696057 - g 81 -4.2 -5.00884 | gap 2, overlap 696060 ATGCGCGGCAAAAAA GACGCC-GGC-GGCCACCAGGA TTT TCCGGGCAACCGGCCAAGCACC TTTTTGCTGCTGGAG Pnap_0655 694761 - 696326 + | glucose-6-phosphate isomerase Pnap_0656 696423 - 696752 + | hypothetical protein TERM 839 696782 - 696809 + T 100 -22.8 -5.47218 | opp_overlap 696782, overlap 696807 CAAAGCCATGAAAAA GGGCCACGGTGC TTTC GCACCGTGGCCC TTTTTTTGCGTCAGG TERM 840 696809 - 696782 - T 100 -22.8 -4.78764 | opp_overlap 696782 696807 CAAAGCCATGAAAAA GGGCCACGGTGC TTTC GCACCGTGGCCC TTTTTTTGCGTCAGG TERM 841 696833 - 696884 + T 75 -7 -4.43477 | opp_overlap 696834 696835, overlap 696807 696834 696835 CGTCAGGCCGCAAAA ATGTGGGGTTTGCCTCCGGGCTTC TCGG GAAGCCCGGCATCCGTCCCCACGA TTTTGATTACATCCC TERM 842 696883 - 696834 - T 87 -8.3 -4.58395 | opp_overlap 696807 696833 696834 696835, overlap 696835 GTCAGGCCGCAAAAA TGTGGGGTTTGCCTCCGGGCTTC TCGG GAAGCCCGGCATCCGTCCCCACG ATTTTGATTACATCC TERM 843 696834 - 696883 + T 71 -10.5 -3.25604 | opp_overlap 696834 696835, overlap 696807 696833 696835 GTCAGGCCGCAAAAA TGTGGGGTTTGCCTCCGGGCTTC TCGG GAAGCCCGGCATCCGTCCCCACG ATTTTGATTACATCC TERM 844 696882 - 696835 - T 80 -11.8 -3.34716 | opp_overlap 696807 696834 696833 696835, overlap 696834 TCAGGCCGCAAAAAT GTGGGGTTTGCCTCCGGGCTTC TCGG GAAGCCCGGCATCCGTCCCCAC GATTTTGATTACATC TERM 845 696835 - 696882 + T 71 -11.8 -2.54881 | opp_overlap 696835 696834, overlap 696807 696834 696833 TCAGGCCGCAAAAAT GTGGGGTTTGCCTCCGGGCTTC TCGG GAAGCCCGGCATCCGTCCCCAC GATTTTGATTACATC groEL 698540 - 696891 - | chaperonin GroEL TERM 846 697409 - 697448 + g 76 -5.6 -4.60487 | gap 1, opp_overlap 697417, overlap 697411 CGCCAACCTTGATCA CGGCAACACCGC-CGGCCA GCT TGGCCACGCGCTCTTGCAG TTTTTCACGGTCGTA TERM 847 697579 - 697607 + g 83 -7.4 -4.56775 | gap 1, overlap 697580 CCCACTTCGATGCGC TTGGC-CTGGCCG AGGT CGGCCAGCGTCAC TTTTTCGAGCGACAT Pnap_0658 698934 - 698644 - | chaperonin Cpn10 TERM 848 699148 - 699169 + H 89 -2.9 -5.47218 | CGGGCCTGCCGCTTG GCCTGGAAA TGAT TTCCCAAGC TTTTTTTCGATGGAC Pnap_0659 699292 - 699978 + | hypothetical protein TERM 849 700066 - 700085 + T 72 -12.1 -2.67709 | opp_overlap 700060 700059, overlap 700065 700082 700083 CTTCAGAAGCCAGCT GCCGCCC GCAGCA GGGCGGC CTTGTCGGTCTTTTC Pnap_0660 701240 - 700053 - | S-adenosylmethionine synthetase TERM 850 700454 - 700425 - G 71 -12.8 -3.05463 | gap 1 ATCCTTGCCACTGAA GGCGCCGCC-GCC GTGCG GGCAGGCGCCGCC GTAGGTATCGACAAT TERM 851 702070 - 702083 + G 76 -9.5 -4.0031 | opp_overlap 702033 AGCTGCGAGCGCCTG CCCCG GGGC CGGGG TTATTTCCTGAAGAT Pnap_0661 701410 - 702258 + | lipid A biosynthesis acyltransferase Pnap_0662 702255 - 703151 + | lipid A biosynthesis acyltransferase TERM 852 703203 - 703221 + T 95 -5.2 -5.29385 | overlap 703204 GCTATCTGTGCTTAT GGGCTGTG CGC TACAGCCA TTTTTTGCTTAAATT TERM 853 703204 - 703220 + T 70 -8.7 -3.76004 | overlap 703203 CTATCTGTGCTTATG GGCTGTG CGC TACAGCC ATTTTTTGCTTAAAT Pnap_0663 704043 - 703264 - | GTP-binding protein, HSR1-related TERM 854 704146 - 704118 - H 70 -6.6 -4.21676 | overlap 704120 ATAATGGATTGAAAA CAGCACACCCCG GCGGG CAGGGCATGCAG GGCCATTTTCCAAAT TERM 855 704641 - 704625 - g 100 -9.5 -5.03314 | GCGACGTCCAAAAAA GCAAAAC CCG GTTTTGC CAAGGACAAGGAAAC Pnap_0664 704244 - 704921 + | cytochrome c, class I TERM 856 704939 - 704961 + F 73 -5.6 -4.59773 | opp_overlap 704955, overlap 704940 CGTTGAACCTGCGGG TTTTTCCTTG AAT CAAGGGAAAC TTTTTGACGCTGCCC TERM 857 705031 - 705057 + F 100 -13.1 -5.29445 | gap 1, opp_overlap 705031 AATCAGTCATATCAA GGCGGGTCTTTC TGAA GAAAG-CCCGCC TTTTTGTTGTTACCG TERM 858 705057 - 705031 - f 83 -13.1 -3.28684 | gap 1, opp_overlap 705031 AATCAGTCATATCAA GGCGGGTCTTTC TGAA GAAAG-CCCGCC TTTTTGTTGTTACCG TERM 859 707265 - 707250 - g 74 -5.4 -4.57341 | gap 1, opp_overlap 707254, overlap 707251 707254 AATCCGCCGGAAAAA GCCA-GG CCA CCATGGC CTTGTCCACCAACCG Pnap_0665 705119 - 707347 + | ResB family protein Pnap_0666 707344 - 708735 + | cytochrome c assembly protein TERM 860 709207 - 709194 - g 86 -5.3 -5.2166 | CAAGAATCCAAAAAA CTTCA CGCT TGAAG AGCTGCTCAAGCTCA Pnap_0667 708811 - 709809 + | putative sulfite oxidase subunit YedY TERM 861 710065 - 710080 + G 77 -2.5 -5.01497 | overlap 710045 GCTTTCGCCGCATGC TGGGC CTGTTC GCCTA TTTTTATGTCGTGCT TERM 862 710358 - 710348 - g 71 -5.4 -4.40561 | opp_overlap 710348 710346, overlap 710345 CGCCGGTAAAAACAA CTTC AAT GAAG TGTTTGTGTACGCCG Pnap_0668 709809 - 710468 + | ferric reductase domain-containing protein Pnap_0669 711855 - 710569 - | diaminopimelate decarboxylase TERM 863 711550 - 711534 - G 78 -3 -5.02074 | CGACGCCGGAAAAAA TGACCT TCTTC AGATCA CCGCCCGCAGCCTGA TERM 864 711716 - 711692 - G 73 -8.5 -4.07568 | opp_overlap 711712 711714, overlap 711706 TCCCGGCCTTCAAAA CCGCGCTGG TAAGACG CCAGCGCCG ACAGCATGGCGGTTT TERM 865 711714 - 711728 + g 76 -5.6 -4.67353 | opp_overlap 711692 711706, overlap 711712 GGTAAGACGCCAGCG CCGACA GCA TGGCGG TTTTTGAATAGATGA TERM 866 712518 - 712528 + G 78 -6.8 -4.62471 | opp_overlap 712510, overlap 712513 712510 CAGTGAACAGGCGGG CCAG CCG CTGG TTTTTGCCGCTTCAG Pnap_0670 712198 - 712548 + | frataxin family protein TERM 867 712570 - 712586 + T 100 -10.1 -5.60993 | opp_overlap 712570 GAAGCCCAGCAAAAA CGGACCT CAC GGGTCCG TTTTTTTATACAGAA TERM 868 712586 - 712570 - T 93 -9.4 -4.74801 | opp_overlap 712570 GAAGCCCAGCAAAAA CGGACC TCACG GGTCCG TTTTTTTATACAGAA Pnap_0671 715037 - 712620 - | 1A family penicillin-binding protein TERM 869 712901 - 712913 + g 86 -4.7 -5.14477 | AGCCGCCGCCAGTTT CGCGG TCG CCGAG TTTTTTGGGTGTGTC TERM 870 713526 - 713502 - G 82 -3.6 -5.14965 | gap 2, overlap 713505 ACCCGCATCAAAAAA CAGCGGCGCGTC ATT GAC-CACCG-TG GCCGGGGTAAAGCCT TERM 871 713580 - 713568 - G 73 -3.3 -4.67607 | TGCCGAATAAATAAA CGGCT TGA AGCTG GAGCCGGGCTGGCGC Pnap_0672 715297 - 716376 + | type IV pilus assembly protein PilM TERM 872 716961 - 716947 - g 75 -2.8 -4.91852 | GTGATCAAAAAGAAA CAGC GTCTTCT GCTG CTACGGCCAAGATTT Pnap_0673 716487 - 716978 + | fimbrial assembly family protein Pnap_0674 717000 - 717674 + | pilus assembly protein, PilO Pnap_0675 717671 - 718222 + | pilus assembly protein, PilQ TERM 873 720118 - 720093 - g 70 -12.5 -2.94045 | opp_overlap 720092, overlap 720095 720108 GGACGTGAACAAGGA CAGCCGCGGCG AAAC CACCGCAGCCG GTATTGCCATCGACA Pnap_0676 718219 - 720357 + | type IV pilus secretin PilQ Pnap_0677 720528 - 722444 + | hypothetical protein TERM 874 722931 - 722904 - g 70 -9.8 -3.57144 | CGCTGTACCGGGAAA CGGCCCACTTCG TCAT CGAAACCGGCCG TCCCTCGGTCTCCAC Pnap_0678 722456 - 723004 + | shikimate kinase Pnap_0679 723057 - 724175 + | 3-dehydroquinate synthase Pnap_0680 724261 - 725457 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 875 726364 - 726376 + G 93 -9.1 -4.68593 | opp_overlap 726346 726347 726344, overlap 726348 AGGCCGGCTTCGGCG GCCAG TTC CTGGC TTTTTCCGTCGTGGG Pnap_0681 725613 - 726761 + | extracellular ligand-binding receptor TERM 876 726873 - 726902 + G 81 -2.1 -5.14563 | gap 2, opp_overlap 726873 726892 726893 GTCATCCGCACCACA TCGTCCAGCGCGG CAATAA CCG-GCAGG-CGA TTTTTTCATCGACAG Pnap_0682 726827 - 727525 + | hypothetical protein TERM 877 731640 - 731624 - g 78 -6.5 -4.65895 | CGCCTGATTGAAAAA TCCAGGG CGG CGCTGGA AAAGGGCGAAAAAGT Pnap_0683 727757 - 732499 + | glutamate synthase (ferredoxin) TERM 878 732768 - 732796 + G 70 -8 -4.07568 | AGGCTAATCTGCAGG CCGCGCGCTGCA TGGAC TGCGGCACGCCG TTTTGCAACAGCGGC gltD 732641 - 734107 + | glutamate synthase subunit beta TERM 879 734197 - 734221 + G 100 -15.1 -5.37043 | opp_overlap 734202, overlap 734202 TAATCCCTTATGATC CAGAAGCCGGA ATG TCCGGCTTTTG TTTTTTCTATGCCCT TERM 880 734202 - 734216 + G 100 -11.4 -5.51612 | opp_overlap 734202, overlap 734197 CCTTATGATCCAGAA GCCGGA ATG TCCGGC TTTTGTTTTTTCTAT Pnap_0685 734191 - 735072 + | ABC transporter related TERM 881 735112 - 735144 + G 75 -3.4 -4.84359 | opp_overlap 735083 735084 GGTTCGCCACCCGCA GCTGGCTGGCCA-ACC TGG GCTATGGCT-GCCGGC TTTTTCTGCGGCTCC Pnap_0686 735069 - 735851 + | hypothetical protein TERM 882 735979 - 735993 + G 85 -5.6 -5.01553 | GCCTGTTTGTCCTGG TGGGCG CAG CGGCCA TTTTGTTTCTGGCTT TERM 883 736306 - 736295 - g 100 -4.4 -5.52384 | CGGCGATGAAAAAAA CCTT GTGG AAGG CGACGTGATCAGGCA Pnap_0687 735933 - 736442 + | hypothetical protein TERM 884 736488 - 736466 - g 85 -5.5 -5.05782 | gap 1, opp_overlap 736476 ATCCATCTGAAAAAA GCCACGG-GA TGGG CCGCCGCGGC TCTGGCTTTCACCCT TERM 885 736659 - 736671 + G 91 -3.3 -5.40474 | opp_overlap 736638 736636 CAGCGCCGGTGCGCA CCGGT GTG ACCAG TTTTTTTGAAAACAT Pnap_0688 736439 - 737224 + | VacJ family lipoprotein Pnap_0689 737395 - 738033 + | toluene tolerance family protein TERM 886 738078 - 738092 + G 72 -4.2 -4.57073 | overlap 738089 GCCGTCCTGACGCAT GCCG TCGCCTC CGGC TTTTTCCACACAGTG TERM 887 738191 - 738231 + G 78 -3.2 -5.08824 | overlap 738191 GTCGGCGCTGGCCAT CC-TGCTGGAGTGCCGTCGC CAG GCGATGGC-TGCGGGCAAGG TTTTTTCCGTGCAGG TERM 888 738251 - 738279 + G 77 -14.5 -2.94194 | overlap 738239 TTCCGTGCAGGGCGC CCCTGGCCGGCTG CTC CAGCTGGCCGAGG TCTATGGCGTTTCTG Pnap_0690 738048 - 738341 + | anti-sigma-factor antagonist domain-containing protein Pnap_0691 738437 - 739396 + | ABC transporter related TERM 889 740075 - 740085 + G 73 -3.2 -4.81083 | TCAGCCTGGGCCTGG TGCT GAC GGCA TTTTTCATCATTAGC Pnap_0692 739393 - 740148 + | ABC-2 type transporter Pnap_0693 740172 - 740417 + | BolA family protein Pnap_0694 740423 - 741697 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase hisG 741694 - 742347 + | ATP phosphoribosyltransferase catalytic subunit TERM 890 742700 - 742690 - g 74 -2.4 -4.84359 | overlap 742692 CGAGGCGCAGAAAAA GGCC AGC GGCG AAAGCTGGAGCTACC TERM 891 742910 - 742894 - g 75 -3.5 -4.83615 | CAGGGGCGAGAAAAA CGCCCTG GTG CTGGCCG CCGCCTACGTTGCCG TERM 892 743414 - 743432 + G 76 -6.6 -4.41047 | overlap 743415 743416 CGCTGGGAGCCGCTG CTGCGCCA CGC TGGCGCGA TTTTCCTTGGCGCCT Pnap_0696 742361 - 743704 + | histidinol dehydrogenase TERM 893 743758 - 743747 - g 81 -2.2 -5.22039 | CCGAAACTCAAAAAA CTGA TCCG CCAG GATGTGCAGTCGATG TERM 894 744355 - 744327 - g 73 -13.2 -3.13403 | gap 1, opp_overlap 744325, overlap 744325 CGTTTGCCAGCAAGA GCTATG-CGGGCC GCAT GGCCCGGCACAGC CATGTGCTGCTGATG Pnap_0697 743705 - 744802 + | histidinol-phosphate aminotransferase Pnap_0698 744799 - 745419 + | imidazoleglycerol-phosphate dehydratase Pnap_0699 745444 - 746199 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit TERM 895 746219 - 746244 + F 74 -2.4 -5.03715 | CTTTTTTCTTCTCCC GGATGCGCCC CTGCCA GGGCAAGTCC TTTTTTCAACCTCAT TERM 896 746906 - 746943 + G 77 -15.5 -2.62263 | CATGGCCGACATCGA CGCGCTGTGCGCCGTCG AGGA CGAGGGCGTGCAGGGCG TGATCTGCGGCCGCT Pnap_0700 746283 - 747023 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 897 747719 - 747733 + G 95 -10 -4.65895 | overlap 747682 GCGGTGCCGATGCGG TGCTGG CGG CCAGCA TTTTTCACTACGGCG Pnap_0701 747031 - 747810 + | imidazoleglycerol phosphate synthase, cyclase subunit TERM 898 748085 - 748065 - g 86 -6.7 -5.00884 | opp_overlap 748065 748066 AGGCGCTGCAAAAAA CCGCCGAAC TGG GCCAGGCGG TGTATTTCAGCCGTT TERM 899 748242 - 748255 + G 72 -3.7 -4.64657 | opp_overlap 748229, overlap 748240 748251 TAGCCTGCCATACCG GCCGC CACA GCTGC TTTTTCAGCCTTTAC Pnap_0702 747944 - 748333 + | phosphoribosyl-AMP cyclohydrolase TERM 900 748544 - 748503 - g 71 -9.3 -3.68886 | gap 1, overlap 748493 748504 AGGAAGCCACCGAAA CCGTGATGGCCGCCAAGGAC ATC GACCATGGCGGCCCT-ACGC CCGAGCTGAACGGCA TERM 901 748709 - 748687 - g 100 -17 -4.2828 | CGGCATCGAGGAAAA GGCGCTGCGC AAG GCGCAGCACC GGGAAGCCATCAACG Pnap_0703 748340 - 748729 + | phosphoribosyl-ATP pyrophosphatase Pnap_0704 748744 - 749124 + | putative transmembrane protein Pnap_0705 749121 - 749480 + | histidine triad (HIT) protein TERM 902 749542 - 749560 + F 74 -10.2 -3.59979 | GCTCGCAGGGTCATA GGCGCCGT CAC ACGGGGCC TTTAGAATCGGCACC TERM 903 749800 - 749788 - g 80 -6.2 -4.72272 | CCTGCTGACGAAAAA CCGG TGGTT CCGG CCAGCCAGGTCACCA Pnap_0706 749626 - 749880 + | twin arginine-targeting protein translocase TERM 904 750001 - 750052 + G 87 -17.3 -2.88249 | opp_overlap 750001 GATTGGCCCGGAAAA GCTGCCGCGCCTGGCCC-GCACCGT CGGT ACGCTGCTGGGCAAGGCGCAGC-GC TATGTCAACGATGTC TERM 905 750052 - 750001 - g 100 -19.5 -4.07885 | opp_overlap 750001 GATTGGCCCGGAAAA GCTGCCGCGCCTGGCCC-GCACCGT CGGT ACGCTGCTGGGCAAGGCGCAGC-GC TATGTCAACGATGTC TERM 906 750140 - 750118 - g 76 -9.8 -3.82261 | overlap 750123 GTTCAAGAAAATGAA GGAAAGCGTC GAG GACGCTGCCC GGGACGTTGAGAACT TERM 907 750135 - 750123 - g 76 -9.1 -4.08579 | overlap 750118 AGAAAATGAAGGAAA GCGTC GAG GACGC TGCCCGGGACGTTGA tatB 749930 - 750397 + | sec-independent translocase TERM 908 750575 - 750605 + G 83 -7.4 -4.58663 | opp_overlap 750566 GATCAAGGCCGTGAT CGCCATTGGCGTGG CGG CCGCCCTGCTGGCG TTTTTCCCCGGTCCT TERM 909 750845 - 750857 + G 100 -7.7 -5.76949 | opp_overlap 750822 GCCGCTGGTCGTGTC CAGCA CGC TGCTG TTTTTTTTCGGCGTG Pnap_0708 750462 - 751265 + | Sec-independent protein translocase, TatC subunit TERM 910 751261 - 751275 + T 70 -2.8 -4.72386 | opp_overlap 751261 CCGAAGCGGCCAAAC CCTG AGTCTTG CAGG TTTTTCGGTAATTTC Pnap_0709 752545 - 751379 - | peptidase S1 and S6, chymotrypsin/Hap TERM 911 751576 - 751586 + g 73 -8.2 -4.07568 | overlap 751568 GGATCCCGCCCTGGG CGGC CGG GCCG TTTTGCAGCACGCCG TERM 912 752274 - 752264 - G 84 -2.4 -5.27335 | GTCGCCAAAGAAAAA CCGG AAC CAGG GGTCGTTCATTTGCG Pnap_0710 752740 - 753504 + | hypothetical protein TERM 913 753946 - 753965 + G 72 -4.2 -4.56597 | gap 1, opp_overlap 753937 753944, overlap 753949 GACACACTGAAATGC TCCAGGCCG AAG CGGCC-GCA TTTTTGGGCAAACCG Pnap_0711 753501 - 754544 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 914 754539 - 754561 + T 71 -4.9 -4.61231 | gap 1, overlap 754544 GCGCGCCATCTGGCT GTATAGCCTG AAAT CAGGCT-TGC TTTTTCAGGCTGTCA TERM 915 754544 - 754557 + T 71 -8.1 -3.81256 | overlap 754539 CCATCTGGCTGTATA GCCTG AAAT CAGGC TTGCTTTTTCAGGCT Pnap_0712 754980 - 754552 - | large conductance mechanosensitive channel protein Pnap_0713 755242 - 755868 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 916 755872 - 755862 - f 74 -2.4 -5.0916 | opp_overlap 755870 TGGTGAAGACAAAAA GGCC TGA GGGC GCGCCACCTCTTCCA TERM 917 756283 - 756293 + G 84 -2.4 -5.32882 | overlap 756280 ACATGCATTCCACCG GGGC ATC GGCC TTTTTTGTCGTGGTG TERM 918 757350 - 757365 + G 71 -4.6 -4.40561 | CTGGGCACCTTCAAG CGCGTT CCCG ACCGCG TTATTTTTGCGGCCC Pnap_0714 755976 - 757385 + | cytochrome b/b6 domain-containing protein Pnap_0715 757402 - 758157 + | cytochrome c1 TERM 919 758213 - 758252 + F 90 -5.9 -5.26119 | gap 2 GCATCGGCACTTTCG GAGTGGATGGTTCTAAGGT TTGA ATCTTAG--CCTTCCACTC TTTTGTTTTTAGGAG Pnap_0716 758277 - 758888 + | glutathione S-transferase domain-containing protein TERM 920 759200 - 759236 + G 72 -8 -4.19735 | gap 1, overlap 759201 759223 CATCAGTCATGTGAT TGCCAT-CTATGCCCGT GAAA ACGGGCAAGGTATGGCC TTTCCTTTTGAAACA TERM 921 759267 - 759250 - g 71 -11.3 -3.53012 | overlap 759253 CCTTTCCTTTTGAAA CAAGCCC CGAA GGGCTTG CCGGCGCCAATGATT Pnap_0717 758931 - 759497 + | ClpXP protease specificity-enhancing factor TERM 922 759600 - 759627 + T 100 -14.2 -4.90266 | opp_overlap 759600 ATTCACTTGTACAAA GGCCGCTAGG GACATACA CCTAGCGGCC TTTTTCATTGGTAAA TERM 923 759627 - 759600 - T 100 -14.2 -3.87994 | opp_overlap 759600 ATTCACTTGTACAAA GGCCGCTAGG GACATACA CCTAGCGGCC TTTTTCATTGGTAAA Pnap_0718 760061 - 759693 - | hypothetical protein Pnap_0719 760896 - 760153 - | ABC transporter related TERM 924 760690 - 760650 - G 71 -13.1 -3.01712 | opp_overlap 760649 760648, overlap 760653 CGCTTTGCTGGAACA CCACGCCCAAGCCTGCCAG CGC CCGGCTGGCCTGGGTGCGC ATGTCGTGTCCCAGG TERM 925 760687 - 760653 - G 78 -15.6 -2.73875 | opp_overlap 760649 760648, overlap 760650 TTTGCTGGAACACCA CGCCCAAGCCTGCCAG CGC CCGGCTGGCCTGGGTG CGCATGTCGTGTCCC Pnap_0720 762063 - 760930 - | hypothetical protein TERM 926 761600 - 761567 - G 100 -20.5 -3.5393 | opp_overlap 761560 761574 AGGATGGGCGTCAAA TCATGAACCGGGTCC CAGG GAACCCGGTTCATGA GTGCGTATCTGTACA Pnap_0721 762135 - 763169 + | YVTN beta-propeller repeat-containing protein TERM 927 764236 - 764252 + G 100 -4.3 -5.40072 | overlap 764211 764233 CCGGCCATGGGACGG CCAGTTG CGC CAGCCGG TTTTTTTGAGCCACA Pnap_0722 763169 - 764377 + | hypothetical protein TERM 928 764821 - 764802 - g 72 -4.2 -4.62069 | gap 1, opp_overlap 764813 TTTTGATCTGAAAAA CCTGC-CCA TGC TGGTGCTGG CCATGCTTTGCGGCG Pnap_0723 764359 - 765177 + | ABC-2 type transporter TERM 929 765836 - 765849 + G 72 -3.7 -4.65895 | GACACCGGACTGGTG GCCGG AATA CCTGC TTTTTACGTGGAAAG Pnap_0724 765221 - 766036 + | hypothetical protein Pnap_0725 766033 - 767037 + | beta-lactamase domain-containing protein TERM 930 768597 - 768613 + G 71 -5.1 -4.41348 | GCTTTCCTGGGTGCG GGCTTCA CGA TCAAGCC TTTGTTTGAAGACCA TERM 931 768716 - 768689 - g 71 -8.3 -3.89354 | overlap 768682 768692 TTGGGAAATCAAGAA CACCGCGCCGC TGTGGG GCGGCGCCTTG ACCACGGCGGGCAAC Pnap_0726 767334 - 768983 + | Pyrrolo-quinoline quinone TERM 932 768996 - 769019 + G 93 -13.8 -4.15565 | opp_overlap 768996 TAAAGCTCTTGAAAA GGGTGGCCGC CCTG GCTGCCACCC TTTTCCCGTCATGCC TERM 933 769019 - 768996 - g 90 -13.8 -4.10453 | opp_overlap 768996 TAAAGCTCTTGAAAA GGGTGGCCGC CCTG GCTGCCACCC TTTTCCCGTCATGCC TERM 934 769081 - 769097 + G 81 -6.5 -4.72272 | overlap 769083 TCCGGCAGTCCCGAT TCCGCTG TTT CAGCGTA TTTTTAATGCCAAAA TERM 935 769083 - 769095 + G 76 -9.1 -3.98256 | overlap 769081 CGGCAGTCCCGATTC CGCTG TTT CAGCG TATTTTTAATGCCAA Pnap_0727 768989 - 769234 + | hypothetical protein Pnap_0728 769231 - 769563 + | cytochrome c, class I Pnap_0729 770754 - 769612 - | pyrroloquinoline quinone biosynthesis protein PqqE TERM 936 769831 - 769774 - G 75 -3.2 -4.8622 | gap 2, opp_overlap 769808 769823, overlap 769775 GCCGGTAATCAAAAA GGCCTGGCAGCGGCAGCCGCCGAAATCC TTGT GGCGCTCGTCG-CAGCTGCTGC-AGGGC GGTTTCATCCAGCTG TERM 937 770556 - 770545 - G 72 -7.2 -4.13767 | overlap 770546 CTCGCCACCGGAAAA GCCC AGCT GGGC GGCGCCCAGGGCGCG Pnap_0730 771055 - 770738 - | coenzyme PQQ synthesis D TERM 938 770856 - 770815 - G 78 -3.6 -5.08824 | gap 3, overlap 770817 CCTGGACGGAAAAAA GCGCTTC-CAGCTCGG-CGGC AAT GCCGTCCGCGCTGAGCTG-GC CGTTGCAGCGGCGCA Pnap_0731 771783 - 771052 - | pyrroloquinoline quinone biosynthesis protein PqqC Pnap_0732 772715 - 771798 - | pyrroloquinoline quinone biosynthesis protein PqqB TERM 939 772776 - 772749 - H 100 -13.4 -5.26316 | opp_overlap 772749 TCAGGGGATAAAAAA GCGCACGGGCGT GTAA ACACCGGTGCGC TTGGTCCAGACTTGC TERM 940 772749 - 772776 + H 72 -11.2 -3.15579 | opp_overlap 772749 TCAGGGGATAAAAAA GCGCACGGGCGT GTAA ACACCGGTGCGC TTGGTCCAGACTTGC TERM 941 773353 - 773411 + G 91 -12.3 -4.27584 | gap 2 TGGGGATGCGTGCTG GCGCTGCGCTATGCC-G-CGCGCTACCCG CAA CGGGTGAAGCGGCTGGTCTTGCGCGGCGC TTTTGGCTTGCGCCT Pnap_0733 772975 - 774072 + | alpha/beta hydrolase fold Pnap_0734 774127 - 775158 + | beta-lactamase domain-containing protein Pnap_0735 777186 - 775135 - | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 942 777367 - 777382 + H 73 -5.4 -4.57073 | TAAGTCAGTGACTTA TAAGGG AAAA CCCTTG TTTTTGGAGGAGATC Pnap_0736 777567 - 778088 + | cytochrome c-type protein TERM 943 778983 - 778969 - g 70 -7.8 -4.05991 | overlap 778972 AAGACAGACTACAAA GACCTG GCT CAGGCC ATGCAAAAGGCGATG Pnap_0737 778165 - 779070 + | extracellular solute-binding protein TERM 944 779166 - 779178 + F 74 -4.7 -4.77438 | AATCACGGCGTTCAA GGCGC CCA GCGAC TTTTTGCTACTGAAT TERM 945 779234 - 779197 - f 100 -20.1 -2.54896 | gap 1, opp_overlap 779197 779198 779199, overlap 779193 TTGCTACTGAATTCA TA-GCTTCTCGCGCAGGC CAC GCCTGCGCAAGAAGCCTA TTTGATGCTAAAAAG TERM 946 779197 - 779234 + F 100 -17.9 -3.78775 | gap 1, opp_overlap 779197 779193, overlap 779198 779199 TTGCTACTGAATTCA TA-GCTTCTCGCGCAGGC CAC GCCTGCGCAAGAAGCCTA TTTGATGCTAAAAAG TERM 947 779198 - 779232 + F 100 -18.6 -3.48024 | opp_overlap 779197 779193, overlap 779197 779199 TGCTACTGAATTCAT AGCTTCTCGCGCAGGC CAC GCCTGCGCAAGAAGCC TATTTGATGCTAAAA TERM 948 779199 - 779231 + F 100 -22.1 -2.68493 | opp_overlap 779197 779193, overlap 779198 779197 GCTACTGAATTCATA GCTTCTCGCGCAGGC CAC GCCTGCGCAAGAAGC CTATTTGATGCTAAA TERM 949 779505 - 779473 - g 73 -6.3 -4.26344 | overlap 779474 ATATCCTGACCAAAA TTTTCGGCAGCCG CAACGAC CGGCTGCTCAAAA CCTACCGTAAAACTG TERM 950 779957 - 779945 - g 71 -5.5 -4.25104 | GTCGCGCGAGGAAAA GCAGG CAG CCTAC AACGCCGACATCACC TERM 951 781621 - 781606 - g 83 -4.7 -5.00616 | CCGGGCTTGAAAAAA CACTC CGCGAC GAGTG GCACATCGACCTGGC Pnap_0738 779448 - 782213 + | preprotein translocase subunit SecA TERM 952 783197 - 783178 - g 74 -4.9 -4.58395 | TCGAGGGCGGAAAAA CCGGCGA GGAGTG CCGCCAG GTGGGCTATGCCATC TERM 953 783397 - 783359 - g 78 -6.7 -4.56597 | gap 2 GCTGGTGGCCAAAAA TGGCGGCCGGCATGCGGAC TAC GTC-G-AAGCCGACGGCCA GCGGGTGATGAAGCA argJ 782283 - 783524 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein Pnap_0740 783543 - 784424 + | hypothetical protein Pnap_0741 784433 - 784888 + | NUDIX hydrolase Pnap_0742 787361 - 784911 - | patatin TERM 954 786302 - 786292 - G 73 -8.2 -4.08767 | TCCACCTCGCGAAAA GCGC TGT GCGC GCGGATGGCTTCGAG TERM 955 787420 - 787458 + H 72 -3.8 -4.72272 | gap 1 TCTATGCCTTTTGTA GCCCGGCCTCGTCAGTC TGAATC GATTGTC-AGGCTGCGC TTTTTACTGGAAAAA TERM 956 787627 - 787639 + G 100 -4.8 -5.50499 | GATTGGCCTCCTGAT TGCG GCCAG CGCA TTTTTTTCAGTCTCC Pnap_0743 787586 - 788905 + | hypothetical protein Pnap_0744 789583 - 788918 - | lytic transglycosylase, catalytic TERM 957 789297 - 789309 + g 75 -3.3 -4.89477 | AACTCCTGGCGAATC TGCAG TTC CGGCA TTTTCTTCTTGAGCC Pnap_0745 791356 - 789611 - | prolyl-tRNA synthetase TERM 958 791243 - 791255 + g 78 -4.7 -4.72272 | opp_overlap 791242 791243 CATGTAGTTGTAAAT GCCGG CGC CCAGC TTTTTGATCAGGCCG TERM 959 791741 - 791756 + G 78 -4.7 -4.72986 | opp_overlap 791735 791747 TGGACACTACAAAGG CCAGA AGCAAA TCTGG TTTTTGCTCCAACTG Pnap_0746 791460 - 792167 + | NUDIX hydrolase TERM 960 792277 - 792288 + G 76 -7.2 -4.34402 | AGAATCCGAAGTCCC GCCG CCAC CGGC TTTTGATGTCGGCAA Pnap_0747 792164 - 792676 + | hypothetical protein Pnap_0748 793854 - 792718 - | gamma-glutamyl kinase TERM 961 793948 - 793973 + r 76 -10.5 -3.76224 | gap 1 CAGGCCAGAAAGCGG GCTGGCATCAGT CGG AC-GATGCCGGC TTTGCTGGCTCGGGC obgE 795049 - 793955 - | GTPase ObgE TERM 962 794189 - 794219 + g 80 -5.3 -4.82901 | overlap 794178 GTCCGCATCGATCAT GTCGAGCTTGTTG AGCAC CAGCCAGCGCGGC TTTTTATACAGCGCC TERM 963 794608 - 794625 + g 79 -8.3 -4.25104 | overlap 794609 TCAGGCTTTTGCGGT CGCCGGG CCAG CCGGGCG TTTTGCTGCGCGGCG TERM 964 794945 - 794960 + g 74 -9 -3.87576 | CCCGCCATCGCCCCC GTTCGG GCCA CCGAAC TCTTTGTATTTTTCG TERM 965 795121 - 795104 - R 100 -12.7 -4.84918 | opp_overlap 795104 TTTAGAAACAGAAAA GCCCCGA CAGG TCGGGGC TTCGATGCCATCGAA TERM 966 795104 - 795121 + r 81 -12.7 -3.06796 | opp_overlap 795104 TTTAGAAACAGAAAA GCCCCGA CAGG TCGGGGC TTCGATGCCATCGAA rpmA 795403 - 795146 - | 50S ribosomal protein L27 Pnap_0751 795742 - 795431 - | ribosomal protein L21 Pnap_0752 795910 - 796893 + | trans-hexaprenyltranstransferase Pnap_0753 797686 - 797060 - | CDP-diacylglycerol--serine O-phosphatidyltransferase Pnap_0754 798971 - 797733 - | general secretion pathway protein F Pnap_0755 800383 - 798974 - | general secretory pathway protein E TERM 967 799499 - 799516 + g 73 -12.7 -3.22298 | overlap 799513 GGCGTTGACCTGCGT CTGGCCG ACGC CGGCCAG TTCGTACTCGATCGG TERM 968 799825 - 799840 + g 74 -5.4 -4.59109 | gap 1, overlap 799823 799828 GCAGCGAGATGCGGC CGTCCTG CGG CAGG-CG TTTTTCGGCAATGTC Pnap_0756 802603 - 800387 - | general secretion pathway protein D Pnap_0757 803413 - 802610 - | putative general secretory pathway N transmembrane protein Pnap_0758 803925 - 803422 - | hypothetical protein Pnap_0759 805157 - 803922 - | hypothetical protein Pnap_0760 806209 - 805178 - | general secretion pathway protein K Pnap_0761 806922 - 806206 - | methylation precursor TERM 969 806441 - 806453 + g 78 -3.3 -5.03314 | overlap 806442 TCAAGCGGCGTGATG CGGAC TTC GTCCC TTTTTTCCGCATCGC Pnap_0762 807302 - 806925 - | general secretion pathway protein I Pnap_0763 807868 - 807302 - | general secretion pathway protein H TERM 970 807560 - 807537 - GR 90 -11.7 -3.92659 | overlap 807531 CCTTCAAAAGCGAAA CCGCTGGCA GTGGCG CGCCAGCGG ACCGGATTGGCAGTC TERM 971 807854 - 807867 + gr 77 -2.3 -5.08824 | TATGTCAGTCCCAAC TGCCG ACAT CCGCA TTTTTTCCCTCGCCG Pnap_0764 808262 - 807843 - | general secretion pathway protein G TERM 972 807958 - 807980 + g 74 -9 -3.87815 | overlap 807948 AGGTACTGGTAGGGG CGGCCCCACG GGT CGTTGGGCAG TTTGTCGAGGTAGGA Pnap_0765 808319 - 808765 + | hypothetical protein TERM 973 810161 - 810173 + G 76 -6.2 -4.56775 | AATGACTTTTCCGGT GGCC CTGAA GGCC TTTTTGCGCCAGGAT Pnap_0766 808992 - 810728 + | type IV-A pilus assembly ATPase PilB Pnap_0767 810814 - 812031 + | type II secretion system protein TERM 974 812359 - 812369 + G 100 -4.6 -5.45802 | overlap 812352 TGGTTGAAGCGGTCA CGGG CAG CCTG TTTTTCTTTTGCGCC Pnap_0768 812031 - 812882 + | prepilin peptidase Pnap_0769 812887 - 813498 + | dephospho-CoA kinase Pnap_0770 813538 - 814293 + | hypothetical protein Pnap_0771 814352 - 814558 + | hypothetical protein TERM 975 814783 - 814767 - g 83 -6.5 -4.91459 | opp_overlap 814769, overlap 814769 CAAGACCCAGAAAAA GGCCG GTGCTCG CGGCC AGATCCGGTTCCTGC Pnap_0772 814636 - 814896 + | hypothetical protein TERM 976 814939 - 814903 - T 100 -16.1 -3.17194 | opp_overlap 814914, overlap 814914 ACCCGCTGAACTGAA CAACAAAAAAACGCCCA TCA CGGGCGTTTTTTTGTTC AGGCTTGAGGGGTGC TERM 977 814928 - 814914 - T 100 -9.2 -5.95946 | opp_overlap 814914, overlap 814903 TGAACAACAAAAAAA CGCCCA TCA CGGGCG TTTTTTTGTTCAGGC TERM 978 814914 - 814928 + T 100 -8.5 -5.7946 | opp_overlap 814903 814914 TGAACAACAAAAAAA CGCCC ATCAC GGGCG TTTTTTTGTTCAGGC Pnap_0773 815267 - 814938 - | glutaredoxin-like protein TERM 979 815303 - 815290 - R 77 -8.1 -4.13767 | TCCTTCAGGTGAAAA GGCCT TGCC AGGCC GTAAAGTCAATAACC Pnap_0774 816274 - 815423 - | HemK family modification methylase Pnap_0775 817492 - 816371 - | peptide chain release factor 1 TERM 980 817542 - 817522 - R 74 -8.2 -3.92745 | overlap 817514 AAAAATTCGGAGAAA CTGCCGGC GGTTT GCCGGGAG GAGGGCGTGGCCAGT Pnap_0776 818879 - 817590 - | shikimate/quinate 5-dehydrogenase TERM 981 817693 - 817720 + g 93 -8.3 -5.08824 | CTGGCATCGCCCGCA TGCAGCTCGGC CATCGC GCCGTGCAGCA TTTTTTGCGTCAGGC TERM 982 817941 - 817957 + g 73 -11.5 -3.53811 | GGCCACCGCCGCCTG CCGGCTG TCC CGGCCGG TTTGCACCACATGCG TERM 983 818502 - 818516 + g 74 -9.2 -3.83026 | overlap 818500 GCCCGCGTCTTCGGC GGCGCG CAC CGCGTC TTTCATCTGGCCGAG TERM 984 819063 - 819078 + G 91 -4.6 -5.35222 | overlap 819065 ATCGCCTTGCTGCTG GTCGTG CTGG CACGTC TTTTTTCTGGATTTT TERM 985 819065 - 819076 + G 71 -5.8 -4.28383 | overlap 819063 CGCCTTGCTGCTGGT CGTG CTGG CACG TCTTTTTTCTGGATT Pnap_0777 818991 - 819281 + | hypothetical protein TERM 986 819362 - 819337 - f 78 -5.9 -4.71426 | opp_overlap 819355, overlap 819305 CCTGCATCAAGAAAA CGGCGGGCGCG ACTT CCAGCCAGCCG CAAGGCAAGCGGGCT TERM 987 819818 - 819808 - g 71 -4.6 -4.39571 | overlap 819809 GGGAGAAATTGAAAA GCGC CGC ACGC CCCATGTGGACAGCG TERM 988 820285 - 820321 + G 91 -17.1 -3.36749 | overlap 820315 CGAGGCGGGCGTGGT GACGCAGCGCGTGGCCG ATG CGGCCGAGCGCGGCGGC TTCGTGTTCGCGGTC TERM 989 820839 - 820828 - g 76 -7.2 -4.25104 | opp_overlap 820809 820829, overlap 820829 GTTCGCCGAGCAAAA GCGC GGCG GCGC GATTCTCGCCGGGCT TERM 990 822429 - 822409 - g 75 -4.5 -4.72986 | overlap 822414 CAGCGTGACCAAAAA GCAGACCGC GCT GCCGCCAGC GACCGTGGGCAAGGC TERM 991 822951 - 822938 - g 72 -3.8 -4.57073 | opp_overlap 822950, overlap 822942 TACCTGCTCGAAAAA GGCA TCACCT TGCC GGCGAACCAGCCCGG TERM 992 823286 - 823270 - g 79 -9.4 -4.12902 | opp_overlap 823269 CAACGACCTGCAAAA CGGCCT GTTAG AGGCCG ATTACATCGTGGTCG Pnap_0778 819593 - 823390 + | FAD linked oxidase domain-containing protein Pnap_0779 823393 - 823821 + | histidine triad (HIT) protein Pnap_0780 823860 - 824273 + | hypothetical protein Pnap_0781 824284 - 825015 + | ubiquinone/menaquinone biosynthesis methyltransferases Pnap_0782 825074 - 826066 + | import inner membrane translocase, subunit Tim44 TERM 993 826149 - 826173 + F 100 -10 -5.54907 | opp_overlap 826148 826147 TTATCCTGCAAAATC GGGGACGTAT GAATA ACACGTCCCC TTTTTCTTTTCTGGA Pnap_0783 826157 - 826852 + | hypothetical protein TERM 994 827723 - 827747 + G 76 -10.7 -3.76174 | opp_overlap 827710 827709, overlap 827721 827725 ACCTCCAGGTCAGCC TGGCGCCGGAA ACC TTCGGGCGCTA TATTTTGCTCGATTT TERM 995 827725 - 827745 + G 71 -11.1 -3.45073 | opp_overlap 827710 827709, overlap 827723 827721 CTCCAGGTCAGCCTG GCGCCGGAA ACC TTCGGGCGC TATATTTTGCTCGAT TERM 996 828180 - 828166 - g 76 -5.6 -4.56597 | overlap 828168 GTCGGCCCTGAAAAA CTGCTG GCC CAGCTG AAGGCGGAAGCACCT ubiB 826849 - 828402 + | putative ubiquinone biosynthesis protein UbiB Pnap_0785 828532 - 828894 + | FmdB family regulatory protein TERM 997 829018 - 829042 + G 74 -5.6 -4.4261 | AGATACTTCCCGTTG CCTGGCACCC CGACC GGCTGCTGGG TTTTCATCTTCCCGG TERM 998 829256 - 829229 - g 74 -12.8 -3.28712 | opp_overlap 829219 829235 829238, overlap 829251 GTTGTTTTCCGAGAA CGGCAATGCCTT TCGC AAGGCATTGCTG GTGCAATGGCCGCGC Pnap_0786 828891 - 829523 + | hypothetical protein TERM 999 829540 - 829525 - f 74 -10.4 -3.53091 | ATCCCCCCCTGTAAA CAGCGC AGCA GCGCTG ACAATTTTCGAGTAT aspS 829561 - 831378 + | aspartyl-tRNA synthetase TERM 1000 831402 - 831433 + T 95 -15.4 -3.72576 | gap 1, opp_overlap 831408, overlap 831408 GGGTTACGCATTCAG C-AAAAAGGGCACCT GCA AGGTGCCCTTTTTAG TTTGATGAGCGGACA TERM 1001 831426 - 831408 - T 100 -14.6 -4.7497 | opp_overlap 831402 831408 CGCATTCAGCAAAAA GGGCACCT GCA AGGTGCCC TTTTTAGTTTGATGA TERM 1002 831408 - 831426 + T 100 -14.6 -5.01811 | opp_overlap 831408, overlap 831402 CGCATTCAGCAAAAA GGGCACCT GCA AGGTGCCC TTTTTAGTTTGATGA Pnap_0788 831901 - 831458 - | UspA domain-containing protein TERM 1003 832051 - 832030 - H 78 -11.7 -3.17075 | opp_overlap 832030 832033, overlap 832033 TGTTGCTGAAGTCAA CAAGAACTG GAGT CAGTTCTTG TTTCAAAAACCAGTT TERM 1004 832030 - 832051 + H 81 -11.7 -3.53343 | opp_overlap 832030 832033, overlap 832033 TGTTGCTGAAGTCAA CAAGAACTG GAGT CAGTTCTTG TTTCAAAAACCAGTT TERM 1005 832073 - 832061 - H 83 -7.7 -4.56597 | TTCTTGTTTCAAAAA CCAGT TGA ACTGG GTAGAACACTCTGTA Pnap_0789 832296 - 833117 + | histidine kinase Pnap_0790 833114 - 833758 + | two component LuxR family transcriptional regulator Pnap_0791 833945 - 834340 + | response regulator receiver protein Pnap_0792 834376 - 835164 + | CRP/FNR family transcriptional regulator Pnap_0793 835780 - 835187 - | NAD(P)H dehydrogenase (quinone) TERM 1006 835406 - 835417 + g 82 -3.6 -5.14563 | AACCCGGGCTGATCG GCCT GTCA GGGC TTTTTTCGTGAAGGC Pnap_0794 836344 - 835877 - | hypothetical protein TERM 1007 836650 - 836663 + r 71 -8.1 -3.90744 | TTGAGTTTTTGTTGA GCCGT CAAC ACGGC TTCTTTCAACGAAAA TERM 1008 836850 - 836825 - R 93 -16.3 -2.87468 | opp_overlap 836825 CCGCACCAGACGATA GCCCTAGAACA GTGA TGTTCTAGGGC TTTTTCGTTTCTGCG TERM 1009 836825 - 836850 + r 100 -16.3 -5.04601 | opp_overlap 836825 CCGCACCAGACGATA GCCCTAGAACA GTGA TGTTCTAGGGC TTTTTCGTTTCTGCG Pnap_0795 837173 - 836871 - | hypothetical protein Pnap_0796 837476 - 839332 + | feruloyl-CoA synthase TERM 1010 839864 - 839828 - g 84 -15.1 -3.35046 | overlap 839826 GGAGGCGCTCAAAGA CCCGGCCGCCGGCATCA ACA TGATCCAGACGGCCGAG AACCTGGCGAAAAAA Pnap_0797 839349 - 840599 + | acetyl-CoA acetyltransferases TERM 1011 840774 - 840747 - f 74 -3.2 -4.86621 | overlap 840749 ATTTTTAAGCAAAAA GTGCCTATTGCG CATA CGCCACGGGCGC TAATAGCTACTTAAA TERM 1012 840891 - 840833 - g 75 -14.5 -2.71537 | gap 2, overlap 840829 840826 840832 ACATTCAAGGACAAG CGGCGCTGGTCACCGGCGGTGGCTCCGGC CTC GGCGAAGCCACCGCCCGCGAACTG-GCC- CGCCTGGGCGCGAAG TERM 1013 841433 - 841412 - g 73 -6.5 -4.2828 | gap 1, overlap 841413 CGCCACTGATGAAAA CCCTGC-CCG AGC CGGTGCAGGC CTCGCTGGCCGCGAG Pnap_0798 840814 - 841578 + | short-chain dehydrogenase/reductase SDR Pnap_0799 841598 - 842017 + | 4-hydroxybenzoyl-CoA thioesterase Pnap_0800 842059 - 843192 + | extracellular ligand-binding receptor TERM 1014 843203 - 843245 + F 75 -12.6 -2.59068 | gap 1, opp_overlap 843193, overlap 843202 843200 AATAAGCCGTTAGTC CCGGCA-CGCGCGGCTCGG CTCCAA CCGCCCCGCGCGCTGCCGA ATCTTCTCCCTTTTC TERM 1015 843465 - 843450 - g 70 -10.4 -3.55444 | TGGCCATCCTGCAAA CCGGGA AGAT TCCCGG CACCGTCTGGCTGCT Pnap_0801 843281 - 844321 + | inner-membrane translocator TERM 1016 844770 - 844787 + G 85 -5.5 -5.0538 | gap 1 CTGCTGGGCTGGGAA GTCG-GCC AGG GGCGCGGC TTTTTTGCGCTGACC Pnap_0802 844323 - 846089 + | ABC transporter related Pnap_0803 846101 - 846859 + | ABC transporter related TERM 1017 847199 - 847250 + G 81 -13.7 -3.57561 | gap 2, overlap 847200 ACCGGCATCCTGCCC TCGCGCTTCGGGCTGCGCGGCAAGG AAGA CCTGGGCG-GCGGCCTG-AGCGCGG TTTACACGCTTGAGA TERM 1018 847200 - 847249 + G 75 -15 -2.74322 | gap 2, overlap 847199 CCGGCATCCTGCCCT CGCGCTTCGGGCTGCGCGGCAAGG AAGA CCTGGGCG-GCGGCCTG-AGCGCG GTTTACACGCTTGAG Pnap_0804 847025 - 848146 + | porin TERM 1019 848211 - 848239 + G 70 -8 -4.07568 | gap 1, overlap 848193 GCGCCCTGGGTGGCG CGGC-CGCCCTGG CCAG CCTGGGCCTGCCG TTTTCGGCCCGCGCC TERM 1020 848417 - 848383 - g 74 -10.6 -3.7941 | overlap 848341 848342 CATGGTCGAGAACAA GCCCGGCGCTGGCG GCCAGAT CGCCATCACCGCGC TCAAGGACGGCCCGG TERM 1021 848792 - 848808 + G 85 -5.8 -5.05782 | CAGATATCGGCCATG TCGTCC CCCGT GGGCGA TTTTTTGCCCTACCT Pnap_0805 848171 - 849157 + | hypothetical protein TERM 1022 850056 - 850032 - g 81 -6.3 -4.67982 | GCGCATTGAAGAAAA GATGGGCCTGC ACG GCAGTCCAACC TGCGTGATGCGCTTT Pnap_0806 849274 - 850965 + | acyl-CoA dehydrogenase domain-containing protein Pnap_0807 850962 - 851555 + | MarR family transcriptional regulator TERM 1023 851621 - 851642 + F 100 -13.1 -5.0925 | opp_overlap 851621 GGAGGTGAATCGAAA GTCTGCAAC GAAA GTTGCAGAC TTTTTCGTTTTGGAC TERM 1024 851642 - 851621 - f 86 -13.1 -3.76125 | opp_overlap 851621 GGAGGTGAATCGAAA GTCTGCAAC GAAA GTTGCAGAC TTTTTCGTTTTGGAC TERM 1025 852018 - 852038 + G 78 -3.3 -5.00616 | gap 1 AGCAATCCTTGCGTC CACCATGG CAATGA CCA-GGTG TTTTTTGGCGCCACG Pnap_0808 851709 - 852260 + | transcription elongation factor GreB Pnap_0809 854595 - 852358 - | (p)ppGpp synthetase I, SpoT/RelA TERM 1026 854564 - 854534 - G 76 -8.9 -4.11484 | gap 1, opp_overlap 854535 854537, overlap 854535 GTCAACGCGGCAAAA CTGGCCGCCGCAGC GTTG GCTGCGGCGGGT-G TTGGCTTGCGGGGAA TERM 1027 854535 - 854564 + g 76 -13.5 -3.17075 | opp_overlap 854534 854535, overlap 854537 TCAACGCGGCAAAAC TGGCCGCCGCAGC GTTG GCTGCGGCGGGTG TTGGCTTGCGGGGAA TERM 1028 854537 - 854562 + g 86 -16.1 -3.14878 | opp_overlap 854534 854535, overlap 854535 AACGCGGCAAAACTG GCCGCCGCAGC GTTG GCTGCGGCGGG TGTTGGCTTGCGGGG TERM 1029 854697 - 854667 - R 80 -9.3 -4.09739 | gap 1, opp_overlap 854675, overlap 854668 854675 TGAACCCTTTGAAAA TGAAAAAAGCACCT GCGA AGGTGCTTTTTT-A TGGGATTTCCTGATT TERM 1030 854690 - 854675 - R 100 -9 -5.46698 | opp_overlap 854675, overlap 854667 854668 TTGAAAATGAAAAAA GCACCT GCGA AGGTGC TTTTTTATGGGATTT TERM 1031 854675 - 854690 + r 100 -9 -5.28826 | opp_overlap 854667 854668 854675 TTGAAAATGAAAAAA GCACCT GCGA AGGTGC TTTTTTATGGGATTT Pnap_0810 854916 - 854713 - | DNA-directed RNA polymerase subunit omega Pnap_0811 855562 - 854942 - | guanylate kinase Pnap_0812 856532 - 855615 - | hypothetical protein TERM 1032 856587 - 856564 - H 93 -8.8 -4.74917 | ACTAAAGAGAGAAAA GACTGGGTGA TTCA TCGCCCAGCC CCCAAGAATTATGTC TERM 1033 857359 - 857342 - g 74 -4.7 -4.57073 | opp_overlap 857322 857342 CAGCGCCTCGAAAAA GACCGGC TGTC GCTGGCC TTGTCCAGGCTGCGC Pnap_0813 856598 - 857605 + | protein kinase TERM 1034 858086 - 858106 + G 71 -11.1 -3.42503 | TCCTGTTCACCTGCC TGGGCTCGC CCA GCAAGCCCA TTCTGGATATTGCGG TERM 1035 858346 - 858320 - g 70 -10.1 -3.6715 | gap 1, opp_overlap 858320, overlap 858313 CGATGGAATGGGAAA CGCCGG-AGGCG TTTG CGCCTACCCGCG ACAGCGCCGACAGCG Pnap_0814 857602 - 858501 + | protein phosphatase 2C domain-containing protein TERM 1036 858508 - 858496 - f 80 -4.8 -5.00616 | TCGGCTGGCAAAAAA GCCT GATTG AGGC TGCTGAACGCGGATT Pnap_0815 858598 - 859206 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Pnap_0816 859225 - 860415 + | putative oxygen-independent coproporphyrinogen III oxidase TERM 1037 860591 - 860565 - g 74 -12.2 -3.51708 | overlap 860561 GAGCGGGCAAAGGAA CGGGCCGCGCAA GCC CTGCGCGACCAG CCGCCCGAAGCCGAA Pnap_0817 860439 - 860696 + | hypothetical protein TERM 1038 860688 - 860675 - T 100 -9.5 -4.84359 | GCAGCTTGAGAAAAA GCCGG GAAG CCGGC CGCGCTGATCAGTCC TERM 1039 861012 - 860981 - T 76 -12.2 -3.05384 | gap 1 GGCGGGTTCAGTGAA TCCGCATGCCCGGCG TCG CGCCCGGCA-GCGGC TCGAGCACATAGATG metG 863096 - 860973 - | methionyl-tRNA synthetase TERM 1040 861877 - 861864 - G 72 -3.7 -4.56597 | TCTCTTTGTCAAAAA GCCCG CCGC CCGGC TCGCGATGTTGATGA Pnap_0819 863303 - 865672 + | ATP-dependent protease La TERM 1041 866720 - 866672 - g 70 -10.2 -3.5393 | overlap 866676 AGGACCGGGGCGAAA TCGAGGC-GGCGCGCCAGGACCGG CTG CCGGTGCTGGTGAGCCTGGC-CGA CTTGCGCGGCGACCT Pnap_0820 865711 - 867438 + | phosphotransferase domain-containing protein Pnap_0821 867529 - 868074 + | putative sigma 54 modulation protein/ribosomal protein S30EA TERM 1042 868592 - 868563 - g 73 -8.5 -4.07568 | GCGGCGTCGGCAAAA GCACCACCGCC GTCAACCT GGCGCTGGCGC TCGCCGCTGAAGGCG Pnap_0822 868226 - 869317 + | hypothetical protein Pnap_0823 869369 - 870319 + | LysR family transcriptional regulator TERM 1043 870465 - 870480 + G 75 -4 -4.72986 | TGCGAGAGTGATGTA TTGCAG AAAG TTGCAA TTTTTCATAAAAATG TERM 1044 870851 - 870841 - g 74 -2.6 -4.87626 | GTGCAACACGAAAAA TAAT AAA ATTA GAAATTGAAGTTTTA Pnap_0824 870396 - 871472 + | hypothetical protein TERM 1045 872089 - 872126 + G 75 -11.9 -3.55622 | gap 1, opp_overlap 872090 872116, overlap 872090 TTGGCCGCTGCGAAC AGGCGCCGGTGGC-GGTG GTG CACCAGACGCCGGTGCCG TTTGCCACGCTTGAA TERM 1046 872090 - 872125 + G 78 -15.4 -2.73159 | gap 1, opp_overlap 872090 872116, overlap 872089 TGGCCGCTGCGAACA GGCGCCGGTGGC-GGTG GTG CACCAGACGCCGGTGCC GTTTGCCACGCTTGA TERM 1047 872363 - 872386 + G 74 -11.6 -3.53012 | CATGGAAAATTCCGG CCTGCGCGGC CTGG GCGGCGCGGG TTTCCCGGCGGGGCG Pnap_0825 871599 - 873401 + | NADH dehydrogenase (quinone) TERM 1048 874441 - 874425 - f 71 -4.3 -4.56597 | CGGCGCGCTGAAAAA CCTGCGC GAC ACCCAGG GCAAGAAATCGCTGG TERM 1049 876406 - 876379 - f 100 -6.8 -5.44119 | overlap 876381 CGCAGCTCAAAAAAA TACAGGCCGGCG CCGC CGCTGGCCTGGC GCCCCGGTCCATGGC TERM 1050 876404 - 876381 - f 100 -13.8 -4.36089 | overlap 876379 CAGCTCAAAAAAATA CAGGCCGGCG CCGC CGCTGGCCTG GCGCCCCGGTCCATG Pnap_0828 876417 - 877262 + | hypothetical protein Pnap_0829 877905 - 877408 - | NLP/P60 protein TERM 1051 878082 - 878034 - H 91 -9.6 -4.59773 | gap 2, opp_overlap 878044 878049 878049, overlap 878036 CGCCAGGCGGAAAAA CCCTCATGCCGGCA-TGCA-GGCG GGC CGCCGTACACTGCCGGCATGCCTG ACTTTCTGGTGCAGT Pnap_0830 878133 - 878663 + | hypothetical protein TERM 1052 878965 - 878949 - gf 72 -2.1 -4.72272 | CGCCGCGATGAAAAA GCTGTTC ACC GATCCGC ACTACAACGTGATGG TERM 1053 879126 - 879106 - gf 80 -8.9 -4.11371 | overlap 879096 879107 CAAGAGGCCGCAAAA GGCCAGCGC AGC GCGCTGACG CAGGGCGACGCTGCA TERM 1054 879125 - 879107 - gf 76 -12.4 -3.06341 | overlap 879096 879106 AAGAGGCCGCAAAAG GCCAGCGC AGC GCGCTGAC GCAGGGCGACGCTGC Pnap_0831 878656 - 879369 + | hypothetical protein TERM 1055 880222 - 880207 - gf 84 -9 -4.26019 | CAACTACAGGCAAAA GCTGTG CGCC CACAGC CGCAATGAAAAAATT Pnap_0832 879296 - 881428 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1056 881783 - 881753 - g 80 -5.3 -4.8622 | gap 2, opp_overlap 881755 881757, overlap 881754 881755 TTCCTCAATGAAAAA CCG-CTGG-CGGCCC TGC GCGCCGACCTGGCGG CGCTCGGCCTGGCGC Pnap_0833 881444 - 882058 + | cytoplasmic chaperone TorD family protein TERM 1057 882247 - 882259 + F 74 -3.3 -4.89063 | ACAGCCCGCCAAAAC CTTCG CGC CGGGG TTTCTTTTTCGGTGC TERM 1058 882389 - 882372 - f 78 -6.9 -4.56597 | CCGGCGCCTGAAAAA GGCGGTG GCTA CAGCGCC TCGGAACATGTCGAG TERM 1059 883592 - 883559 - g 84 -15.4 -3.38272 | gap 1 GATGATGAGCCAGAA CCGGCCCA-GCACCA TCGTC TGGTGCATGGGCCAG ACCCAGCACACCACC TERM 1060 884744 - 884720 - g 73 -2.8 -4.72986 | CATCCTGATGAAAAA GCTCGGCT GGTGGGATG AGCTGAGC GAGCCTGAAAAAGCT TERM 1061 885132 - 885097 - g 71 -9 -3.72576 | GCGGCGGCGAGGAAA CCCGCTCCAACCCG TGGCTGGC CGAGTTGCAGCAGG AAATGTTCATCGAGA Pnap_0834 882477 - 885452 + | molybdopterin oxidoreductase Pnap_0835 885457 - 886077 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pnap_0836 886074 - 886301 + | putative lipoprotein TERM 1062 887465 - 887424 - g 84 -15.1 -3.30443 | gap 1, overlap 887455 GCATGACGACATCAA GGCGGGGCGCATTC-CCGCG CAG CGCAGCGAACCCGCGCCGCC CGCCAGCCCGGCGGT Pnap_0837 886318 - 887490 + | formate dehydrogenase, gamma subunit Pnap_0838 887513 - 887908 + | hypothetical protein TERM 1063 887929 - 887951 + F 100 -12.7 -5.06451 | gap 1, opp_overlap 887929 CAATCTTCTTCCAAA GGCCGG-GCC GCAA GGCGCCGGCC TTTTTTACGCTAGTC TERM 1064 887951 - 887929 - f 85 -12.7 -3.53761 | gap 1, opp_overlap 887929 CAATCTTCTTCCAAA GGCCGG-GCC GCAA GGCGCCGGCC TTTTTTACGCTAGTC TERM 1065 888313 - 888282 - g 100 -16.6 -4.67755 | gap 1, opp_overlap 888306, overlap 888283 ACATCGAGGCAAAAA CCGCGCAGCGGGTCG TCA CGACCGGCTGCG-GG CAGGGCAGCGTGTTT TERM 1066 888313 - 888283 - g 89 -16.8 -3.3993 | opp_overlap 888306, overlap 888282 CATCGAGGCAAAAAC CGCGCAGCGGGTCG TCA CGACCGGCTGCGGG CAGGGCAGCGTGTTT Pnap_0839 887975 - 888847 + | formate dehydrogenase, subunit FdhD Pnap_0840 889900 - 888926 - | hypothetical protein Pnap_0841 890723 - 889959 - | short-chain dehydrogenase/reductase SDR Pnap_0842 891457 - 890720 - | fumarylacetoacetate (FAA) hydrolase TERM 1067 891408 - 891385 - G 72 -2.4 -4.8048 | overlap 891386 891387 GGCCCACAGGAAAAA CCGCAGTG CTACCGGC CACTGCAA CGGTGGCTGGCGCAG Pnap_0843 892428 - 891454 - | hypothetical protein TERM 1068 892459 - 892472 + r 100 -5.9 -5.626 | GTGTTCTTTGGCGTT CCGGG GTGT TCCGG TTTTTTTGTCAGATC Pnap_0844 893439 - 892486 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 1069 892956 - 892934 - G 81 -9.8 -4.18197 | ATTGGGCAGCCAAAA GCCGCCGC CCGGGTC GCGACGGC GCGGCCCACCCGCCC Pnap_0845 893581 - 894753 + | citrate synthase TERM 1070 895158 - 895100 - g 76 -6 -4.65895 | GCCTTCATTGAAAAA GCCCGGGCGCTCGGTCTG-AAGGCCA TCTCGACCG TCACCTTTCCGACCATG-GCCCGGGC GCGCGACGAGGACGG TERM 1071 895605 - 895589 - g 93 -8 -5.17576 | overlap 895602 GATGAACTGAAAAAA CCGGTT GCCGA AACCGG CCTTCGCGGCGCGCG TERM 1072 895939 - 895968 + G 85 -14.3 -3.57263 | gap 1 GCTGGTGAGCAGCAC GCTGCCGGCCGCGA CCC TC-TGGCCGGCGGC TTTCGGCATGGGCAT TERM 1073 896270 - 896315 + G 70 -13.2 -2.90212 | gap 1, opp_overlap 896263 896265 896262 AACGAAACCACGGCG CCGCGCTGGCTGGT-GCTGGC CACGC GCCAGCTGTCGGCCCGCCCGG TCTATGCGGTGGTGC Pnap_0846 894869 - 897445 + | hypothetical protein Pnap_0847 897460 - 897891 + | globin TERM 1074 898002 - 897988 - f 84 -2.8 -5.40072 | TTGGTCGGAAAAAAA GTTTCA TCA TGTAAC AATTGCAAGCTCACA TERM 1075 899087 - 899076 - g 72 -2.2 -4.7373 | TCACTGCATCAAAAA CTGC TCGA ACAG GGACTGACCGCCAAC TERM 1076 899340 - 899326 - g 70 -10 -3.6502 | GAGGCTTGATTGAAA GCATGC TGA GCATGC CCGTCGAGTCAGTCT Pnap_0848 898032 - 899366 + | hypothetical protein TERM 1077 900026 - 900008 - g 72 -2.3 -4.8083 | gap 1, overlap 900010 GAACAGCATCAAAAA CTGCGTGC CTCG GC-CGCTG GCCTGTCGCGTGAGG TERM 1078 900182 - 900141 - g 73 -10.8 -3.64049 | gap 1, opp_overlap 900169, overlap 900158 GCAACAACGCCCAAA CGCTTGCGCGCGAACGAGG CACGC CCTGGGTCGCCCGC-AGCG CGCCAGCGGCCTCGT TERM 1079 900633 - 900610 - g 74 -10.2 -3.72027 | gap 1, opp_overlap 900608 900625, overlap 900596 AGGCCGCATCAACAA CGG-CCAGCCC CAA GGGCAGGGCCG CATGCGTTATGCATC Pnap_0849 899381 - 900997 + | MORN repeat-containing protein TERM 1080 901004 - 901020 + T 78 -2.2 -5.25735 | gap 1, opp_overlap 900992, overlap 901004 901005 AAAGACTGAATCCTT C-CGCCG GAAA TGGCGAG TTTTTGATTTTTTCG Pnap_0850 902194 - 901097 - | ABC transporter related TERM 1081 901472 - 901444 - G 71 -5.2 -4.4078 | overlap 901446 TGGCCGGAACGAAAA CGCCGTGGCCAA TGAAG TCGGCCACAAAG CGGGTTGCCGGCCGG TERM 1082 902221 - 902263 + H 70 -5.3 -4.43221 | gap 1, opp_overlap 902217 902220 GGCTGCAAACACCAC GGCGTACGCGGGCG-AGGCC TCAT GGCCTGCACCGGCGATGGCC TTTTATCGGGTCTTT TERM 1083 903143 - 903190 + G 79 -11.2 -3.90286 | gap 1, overlap 903138 903144 903148 CCGGTGCAACTCAAG GGCGGTCGG-GCGGCGCTGGC CTGGGTT GTCTGCGCCGCGCCGATTGCG TTTGGCTTTGTGCTG TERM 1084 903144 - 903189 + G 77 -14.7 -2.93449 | gap 1, overlap 903143 903138 903148 CGGTGCAACTCAAGG GCGGTCGG-GCGGCGCTGGC CTGGGTT GTCTGCGCCGCGCCGATTGC GTTTGGCTTTGTGCT TERM 1085 903148 - 903185 + G 74 -12.7 -3.31853 | gap 1, overlap 903144 903143 903138 GCAACTCAAGGGCGG TCGG-GCGGCGCTGGC CTGGGTT GTCTGCGCCGCGCCGA TTGCGTTTGGCTTTG TERM 1086 903656 - 903615 - g 90 -20.1 -2.78816 | gap 1, opp_overlap 903612 CCAGCTTTGATGACA GCGCCCGCATGCTCGGCACC ACC GGCGCCG-GCCTGCTGGCGC GGGTGCATTGGCCGC Pnap_0851 902279 - 903901 + | binding-protein-dependent transport systems inner membrane component Pnap_0852 904080 - 904301 + | CsbD family protein Pnap_0853 904357 - 904926 + | hypothetical protein TERM 1087 904984 - 905011 + T 100 -12 -6.15828 | opp_overlap 904984 TCAACATCCTGAAAA TCCCGGCACTGT GCAA GCAGTGGCGGGA TTTTTTTTTGATACA TERM 1088 905011 - 904984 - T 88 -11.3 -4.14472 | opp_overlap 904984 TCAACATCCTGAAAA TCCCGGCACTG TGCAAG CAGTGGCGGGA TTTTTTTTTGATACA Pnap_0854 905357 - 905043 - | hypothetical protein TERM 1089 905160 - 905192 + g 84 -2 -5.31275 | gap 2, overlap 905190 ATTGCCCTTGACCAT GGCTG-CG-CTGGA AATCAAG TCCTGCCGACAGCC TTTTTTATGATCAAA TERM 1090 905528 - 905550 + G 75 -4.1 -4.68593 | overlap 905536 AACTGACCGAACCTG TTTTGGCGC CGCCC GTGCCGGAA TTTTTGGCTCATGGC TERM 1091 907272 - 907282 + G 73 -3.2 -4.70879 | overlap 907251 CCGCAGCGAGCTGGG CAGG GGT TCTG TTTTTACCCTTTACC Pnap_0855 905437 - 907767 + | GAF sensor hybrid histidine kinase TERM 1092 907805 - 907781 - T 100 -3.5 -6.04378 | gap 1, opp_overlap 907781 AAAGCAGAAAAAAAA CCCGCCATGC CAGGCT GCGTG-CGGG TTTTGAGAGCGTCTG Pnap_0856 912022 - 907982 - | hypothetical protein TERM 1093 908148 - 908183 + g 83 -15.4 -3.14132 | gap 1, opp_overlap 908138 GAAAAGCGCTTGCCC AGCGTGACGGCGCCGCC CGT GGTGGTGCCGTC-CGCA TTGCTGGACGCGCCC TERM 1094 910433 - 910462 + g 73 -7 -4.35116 | GGCGTCCAGGCCGGG GGCCGTCAGTGC CAGCTT GCCCTGGCCGCC TTTTGCTGTGGGCTG TERM 1095 911035 - 911058 + g 74 -5.1 -4.54727 | overlap 911029 GTTGCATTTGCAAGG CCCAGGCCG GGCTGG CGGCGGGGG TTTTGCTTTCAAGCG TERM 1096 911888 - 911944 + g 70 -10.2 -3.55444 | gap 3, opp_overlap 911887, overlap 911937 GGCCCACCACCACAG GGTGCCTGT-TGCGCCGACGGCCAGCG CAACCA CGCCGGCCGT-GGCCCATGCAG-CGCC TTTCAGCCATCGCCG TERM 1097 911969 - 911984 + g 71 -6 -4.31587 | overlap 911937 911973 TCGCCGTATGGGCTT GGCCGC AGGC GCTGCC TTCTTGTTTTTAGGC TERM 1098 911973 - 911987 + g 74 -5.6 -4.44355 | overlap 911937 911969 CGTATGGGCTTGGCC GCAGGC GCT GCCTTC TTGTTTTTAGGCTTG Pnap_0857 913977 - 912022 - | surface antigen (D15) TERM 1099 912734 - 912687 - G 76 -9.7 -4.05033 | overlap 912688 912727 912728 CGTATTGCACATAAA TGTTGCGGTCGATCCGGTCGC CGGCCT GCGACCGGCCAAACCGCAGCC GCTGCGCCTGGGTGA TERM 1100 912733 - 912688 - G 71 -13.2 -3.02698 | overlap 912687 912727 912728 GTATTGCACATAAAT GTTGCGGTCGATCCGGTCGC CGGCCT GCGACCGGCCAAACCGCAGC CGCTGCGCCTGGGTG TERM 1101 913080 - 913064 - G 76 -7.9 -4.32402 | overlap 913061 913066 GCCGAATCAAAATAA CCGCTGG CAG CCAGCCG CTGCTGCGCCTGCAC Pnap_0858 915267 - 914044 - | hypothetical protein TERM 1102 914740 - 914753 + g 87 -5.9 -5.14563 | CCAGACTTTCACCGC GCTGC GGTT GCGGC TTTTTTCCTGGCCGA Pnap_0859 915879 - 915283 - | hypothetical protein Pnap_0860 916746 - 915904 - | ATPase TERM 1103 916037 - 916086 + g 71 -5 -4.44667 | gap 1, overlap 916038 GCTTCGAGCGGAATG TCTTCGGCCA-CCAGCAGCTTGA GCCAG TCGAGCAGTTCGCTGGTCGAGGG TTTCTTCTTCAGGCC Pnap_0861 916879 - 917556 + | cytochrome c, class I TERM 1104 917599 - 917583 - T 100 -9.4 -5.28176 | opp_overlap 917583 CTTATGCACAAAAAA GCCGCT GACCA AGCGGC TTTTTTTATGGGCGG TERM 1105 917583 - 917599 + T 100 -9.4 -5.60993 | opp_overlap 917583 CTTATGCACAAAAAA GCCGCT GACCA AGCGGC TTTTTTTATGGGCGG Pnap_0862 918077 - 917643 - | hypothetical protein TERM 1106 917688 - 917716 + g 74 -12.3 -3.53444 | opp_overlap 917682 TTCGATATAGGCCGC GCCATCGGGCGGG CGG CCTGCGCGCTGGC TTTCCCAGACCATGC Pnap_0863 918232 - 918453 + | hypothetical protein Pnap_0864 919322 - 918486 - | beta-ketoadipate pathway transcription regulator TERM 1107 919808 - 919823 + G 79 -8.2 -4.30719 | overlap 919803 GCATCCGCGCCGCCG GTGCCG GCAT CGGCGC TTTCTTCTGCCCCAC Pnap_0865 919468 - 920178 + | 3-oxoacid CoA-transferase, A subunit Pnap_0866 920197 - 920841 + | 3-oxoacid CoA-transferase, B subunit TERM 1108 921575 - 921539 - g 84 -2.2 -5.24531 | gap 1, opp_overlap 921516, overlap 921540 ATCCCCCAGAAAAAA GGCGATGC-CATCCTTG TGGA CCAGGACGAGCATCCGC GCGCCACCTCGATGG Pnap_0867 920891 - 922099 + | beta-ketoadipyl CoA thiolase TERM 1109 922408 - 922446 + G 72 -4.4 -4.57073 | gap 1, overlap 922428 CTGGATGACGTGGTC GGCCTGCACCTGC-GCG CCGTCC TGCTGCTGACGCAGGCC TTTTTGCCGACCCTG Pnap_0868 922105 - 922839 + | short-chain dehydrogenase/reductase SDR TERM 1110 923175 - 923130 - g 84 -15.3 -3.30124 | gap 1, overlap 923153 CGTCATTGTTGACAA CCGCGCCGGCGCC-GGCGGC AACATCG GCGGCCAGGCGGCGGCCCGG GCGGCGGCTGACGGC Pnap_0869 922885 - 923904 + | hypothetical protein Pnap_0870 924550 - 923909 - | hypothetical protein TERM 1111 924376 - 924356 - G 83 -6.7 -4.87665 | overlap 924358 CTGGACCCAGAAAAA CGGCCGCCG GTC CAGCAGCAG GTCGCGCAGCGTGCC Pnap_0871 924706 - 925743 + | ISXo7 transposase Pnap_0872 927676 - 925769 - | glutathione-regulated potassium-efflux system protein KefC TERM 1112 926773 - 926753 - G 73 -3.1 -4.72986 | overlap 926755 GACGGCGATGAAAAA CAGGCCCAG CAG CAAGGCCTT GAACGGCTCGATGTC TERM 1113 926855 - 926843 - G 76 -10.5 -3.86015 | CACGCCGGCCAGAAA GGCGC CCA GCGCC ATCGACAGGCCGACC TERM 1114 927156 - 927144 - G 80 -4.7 -4.88222 | overlap 927145 AGCAAAATCGAAAAA CCGGC CTG GCCGC TGGAGGTGCGCATCA Pnap_0873 927738 - 928193 + | dehydratase Pnap_0874 928694 - 928215 - | RNA methyltransferase TERM 1115 928601 - 928587 - G 72 -7.8 -4.18018 | GTCGTCCATCGAAAA GCCGAG CGG CTCGAC CAGGTGCAGGCGGCA Pnap_0875 929532 - 928765 - | hypothetical protein TERM 1116 928949 - 928976 + g 71 -11.3 -3.53563 | gap 1 GCGCCCCGGACGTTG GCCAGC-CGGGC TTCGC GCCTGAGCTGGC TTTGCGGACGCGTGT TERM 1117 929215 - 929200 - G 86 -6.8 -5.0133 | gap 1, overlap 929202 CAGGCTGGCAAAAAA GC-CGGC CCA GCCGTGC TGCTCGCCAAACTTG TERM 1118 929963 - 930019 + G 86 -6.4 -4.98616 | gap 1, opp_overlap 929963 ATGGCGCTGCACGAA TCCGCCGACCCGCAAGCCCTGCTGGCC CAGT GGC-ACCAGGCCCTGAAGGTCGATGGA TTTTTGATGTTTTCA TERM 1119 930328 - 930355 + G 81 -13.4 -3.65754 | overlap 930351 GGCGGCCCAGCTGAC CGGCAGCGACGG CCGG CTGTCGCTGACG TTTGAAGTCATTTAT Pnap_0876 929576 - 930478 + | biotin synthesis protein BioC TERM 1120 930558 - 930601 + F 100 -6.8 -5.64873 | overlap 930535 CCTAGAGAGGAATTT GCTGGTTTCTGTTTAAATCA ATGG TGATTTGGCGAGAAACCTGC TTTTTTCTTGTTACG Pnap_0877 930646 - 931140 + | putative transmembrane protein TERM 1121 932412 - 932400 - g 70 -7.7 -4.0156 | CTACACCAAGAACAA CTGGT CCA ACCAG ACCGGCCAGATCGTT Pnap_0878 931255 - 932460 + | cytochrome c oxidase, subunit II TERM 1122 933486 - 933510 + G 71 -9.1 -3.78778 | CCACATGTTCACCAC CGGCATGCCGG TCA CCGGCCAGCTG TTCTTCATGTACTCG Pnap_0879 932554 - 934188 + | cytochrome-c oxidase TERM 1123 934263 - 934229 - f 100 -2.6 -5.9873 | opp_overlap 934254 934255, overlap 934232 CGATCAGAAAAAAAA CAACCTTCGCCTGG CCCTGAT CCTGGCGTCGGTGG CCGCTGTTTTCTTTT TERM 1124 934260 - 934232 - f 76 -2.9 -5.03409 | opp_overlap 934254 934255, overlap 934229 TCAGAAAAAAAACAA CCTTCGCCTGG CCCTGAT CCTGGCGTCGG TGGCCGCTGTTTTCT TERM 1125 934255 - 934269 + F 84 -3.4 -5.29885 | opp_overlap 934232 934229, overlap 934254 TGGCCCTGATCCTGG CGTCGG TGG CCGCTG TTTTCTTTTTCGGTT Pnap_0880 934350 - 934928 + | cytochrome C oxidase assembly protein Pnap_0881 934925 - 935137 + | hypothetical protein TERM 1126 935262 - 935280 + G 91 -3.1 -5.39755 | gap 1, overlap 935266 TTCGCGGCACCCGGT CATGGCCG CCAT CGGCT-TG TTTTTTGTGATTCTG TERM 1127 935266 - 935277 + G 86 -7.2 -4.75967 | overlap 935262 CGGCACCCGGTCATG GCCG CCAT CGGC TTGTTTTTTGTGATT Pnap_0882 935197 - 936078 + | cytochrome c oxidase, subunit III TERM 1128 936143 - 936127 - T 73 -5 -4.63932 | opp_overlap 936127, overlap 936129 GACTGTTCAACAAAA GGCCGC TTGAC GCGGTC TTTTTTATTTACTTA TERM 1129 936127 - 936143 + T 100 -7.2 -5.72053 | opp_overlap 936127 936129 GACTGTTCAACAAAA GGCCGC TTGAC GCGGTC TTTTTTATTTACTTA Pnap_0883 936385 - 936164 - | putative transmembrane protein Pnap_0884 936404 - 937150 + | putative transmembrane cytochrome oxidase TERM 1130 937629 - 937661 + G 95 -15.5 -4.08945 | opp_overlap 937628 937627 GGTCAACGATGAAGC GCCGGTGCGTGAAGC CTT GCTGCCCGCACTGGC TTTTGCCACCGTGCT Pnap_0885 937309 - 937881 + | hypothetical protein Pnap_0886 938028 - 939206 + | cytochrome oxidase assembly Pnap_0887 939203 - 940123 + | protoheme IX farnesyltransferase TERM 1131 940147 - 940179 + G 76 -14.1 -3.16191 | opp_overlap 940144, overlap 940144 TTGCTGATGCAACCC GGCCGCCGGCGTG CCTTCAA CACCCTGGCGGCC TTGATGGCGCTGTCG TERM 1132 940314 - 940350 + G 73 -3 -4.70879 | gap 1, opp_overlap 940302 CAACGGGCAGTTGCG CACGCTCAAGGACTTTG CCGG CAAGGTCGT-GGTCGTG TTTTTCGGCTTTACC TERM 1133 940447 - 940419 - g 100 -18.9 -4.98531 | GGCCGAAATCAAAAA GCAGCTTGGCGCC GAT GGCGACAAGCTGC AGGCCATCTTCATCA Pnap_0888 940120 - 940752 + | electron transport protein SCO1/SenC TERM 1134 940781 - 940759 - T 100 -8.5 -5.47399 | gap 1, opp_overlap 940759 TCAAGCTGAAAAAAA GCCTGCCACT TTCC AGTG-CAGGC TTTGGGGCGGGCAAG TERM 1135 940818 - 940841 + T 85 -4.5 -5.17786 | gap 1 ATCCACCGGCGGCAG GGT-CAGGCG TAGGT CGCCAGCACC TTTTTCATTTTCTTC Pnap_0889 941788 - 940820 - | RNA polymerase, sigma 32 subunit, RpoH TERM 1136 941326 - 941315 - G 80 -5.8 -4.70659 | opp_overlap 941318, overlap 941317 941318 GCGCAGATTGAAAAA CAGC TTGC GCTG GGCCTTGGTCGTGGC TERM 1137 941318 - 941360 + g 83 -7.4 -4.61633 | opp_overlap 941315 941317 941318 CAGATTGAAAAACAG CTTGCGCTGGGCCTTGGTCG TGG CGACCTTGACCATGCGCCAG TTTTTCAGGATGTAT TERM 1138 941647 - 941612 - G 73 -8.9 -4.07885 | GAGCTTTTTGGAAAA CTCCTGCTCCTGCTC CAGGGT GAGCATGGGCAGGCG GTTGACGGCCGAAAT Pnap_0890 942345 - 942058 - | hypothetical protein TERM 1139 942449 - 942484 + r 74 -10.3 -3.6106 | TGCCGTTGACTTACC CCAGCAGCGCCTGCG CAAATT CGCGGGCGTTGAAGG TTTCCAGGTCTTCGA Pnap_0891 943616 - 942444 - | signal recognition particle-docking protein FtsY TERM 1140 942875 - 942891 + g 71 -5.7 -4.2828 | overlap 942873 CCGCGTCAAAGCTGA CGGCCGC CGG GTCGCCG TTTTCCTGGCTGACA TERM 1141 943400 - 943365 - G 78 -15.4 -2.71144 | gap 1, overlap 943320 CAGCTTGCCGAACCA GCGCTGTCGCTCGGGCG CGA CGGCC-AGCGCCAGCGC TGCGGGAATGTCGAT TERM 1142 944569 - 944531 - g 71 -13.1 -3.03159 | gap 1 TCAAGGTGCCCAAGA TCGCGGCGGCGGAT-CTG GCAC CAGCACCCGGCGCCGCGT CGCCGACGCTTGCCG Pnap_0892 943645 - 945144 + | peptidase M16 domain-containing protein TERM 1143 945789 - 945764 - g 70 -11.9 -3.17054 | opp_overlap 945771, overlap 945756 945759 TACGAAATGACCGAA GCCACGCTG GCGGCCAT CAGCGTGGC GGACATGCAGGCCGC Pnap_0893 945176 - 946531 + | peptidase M16 domain-containing protein Pnap_0894 946528 - 947202 + | putative methyltransferase Pnap_0895 947268 - 947789 + | pantetheine-phosphate adenylyltransferase Pnap_0896 947794 - 948063 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pnap_0897 948859 - 948167 - | peptidyl-tRNA hydrolase TERM 1144 948898 - 948870 - R 100 -17.5 -4.7497 | overlap 948894 948895 CCCACGCATGAAAAA GGCCCTTAACCTC GTG GAGGATAAGGGCC TTGGGCCACTGCCTG Pnap_0898 949610 - 948954 - | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 1145 949707 - 949661 - R 75 -5.9 -4.66163 | gap 1, opp_overlap 949660 949697 ACCCTGATTTAAAAA GACTGCCCAGGCTGGAAAACTT CGGA AAGTTTGCGTG-CTGCGCAGTC AGCTTTTTTGTTTCA TERM 1146 949697 - 949710 + r 91 -3.8 -5.64421 | opp_overlap 949661, overlap 949660 TCGGAAAGTTTGCGT GCTG CGCAGT CAGC TTTTTTGTTTCAGAT Pnap_0899 950694 - 949720 - | ribose-phosphate pyrophosphokinase TERM 1147 950848 - 950818 - R 74 -7.5 -4.08767 | overlap 950820 950822 TGCAGTCTTCCAAAA CACATAGACCCGC CACTT GCGGGTCTAAAAG AGCCGCATCATGCGG TERM 1148 950846 - 950820 - R 70 -8.7 -3.6422 | overlap 950818 950822 CAGTCTTCCAAAACA CATAGACCCGC CACTT GCGGGTCTAAA AGAGCCGCATCATGC TERM 1149 950844 - 950822 - R 88 -13.5 -3.39908 | overlap 950820 950818 GTCTTCCAAAACACA TAGACCCGC CACTT GCGGGTCTA AAAGAGCCGCATCAT TERM 1150 950866 - 950848 - R 100 -14.6 -4.07568 | CTTGCGGGTCTAAAA GAGCCGCA TCA TGCGGCTC CTGAGTCAACACAGA TERM 1151 950900 - 950878 - R 91 -14.9 -3.08679 | overlap 950880 950882 GCTCCTGAGTCAACA CAGACCCGC ATCTG GCGGGTCTG AAAAATTTGGCAGGG TERM 1152 950898 - 950880 - R 76 -11.7 -3.10344 | overlap 950878 950882 TCCTGAGTCAACACA GACCCGC ATCTG GCGGGTC TGAAAAATTTGGCAG Pnap_0900 951954 - 951061 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 1153 951505 - 951490 - G 74 -2.4 -4.84527 | opp_overlap 951498, overlap 951495 TCCAGAGAGGAAAAA GGGAAC GTCC GCGCCC AGCGACAGTGCGATG Pnap_0901 952511 - 951999 - | putative lipoprotein Pnap_0902 954401 - 952524 - | tetratricopeptide domain-containing protein TERM 1154 954188 - 954167 - G 74 -13.7 -2.93723 | gap 1, overlap 954146 954147 954144 954162 TGTCGAGCAACGACA GCGGCGC-GG AGT CCTGCGCCGC CTTGGCCTGGGCGAG Pnap_0903 954445 - 955260 + | formamidopyrimidine-DNA glycosylase TERM 1155 955686 - 955665 - g 73 -11.5 -3.64703 | opp_overlap 955653, overlap 955666 TGTTGCCGATTGAAA CGCGCCTGC AGCC GCAGGCGCT GATGGAATGGCGTCT TERM 1156 955685 - 955666 - g 75 -15 -2.78679 | opp_overlap 955653, overlap 955665 GTTGCCGATTGAAAC GCGCCTGC AGCC GCAGGCGC TGATGGAATGGCGTC TERM 1157 956968 - 956996 + G 72 -3.8 -4.65895 | gap 1, overlap 956938 956969 TTCCGAGCGCCTGGT TCGCGCGCTGAGC AACC GCTT-GCGTGTGG TTTTTGAGTCGGCAC TERM 1158 957080 - 957037 - g 70 -10.3 -3.63569 | gap 1, opp_overlap 957066 GGAACTGTGGAACAA GTCGGCGTCCGCGCAACTTG ATGCG CAA-CTGCGCGAGCGGCGAC GCAATTTCGCACGGC Pnap_0904 955325 - 957301 + | hypothetical protein Pnap_0905 957301 - 958455 + | A/G-specific adenine glycosylase Pnap_0906 959313 - 958456 - | hypothetical protein TERM 1159 958946 - 958988 + g 80 -14.2 -3.15663 | overlap 958948 958977 AGGTTGCGCTCCAGT TCGATGGCATCGACCAGTGC CCG GTGCTGGTCGGTGGCATCTA TTCGTGACAGTGGAT TERM 1160 958948 - 958986 + g 86 -16.8 -3.14051 | overlap 958946 958977 GTTGCGCTCCAGTTC GATGGCATCGACCAGTGC CCG GTGCTGGTCGGTGGCATC TATTCGTGACAGTGG Pnap_0907 961117 - 959468 - | DNA repair protein RecN TERM 1161 960580 - 960612 + g 71 -6.1 -4.36914 | overlap 960581 960582 CACGGTCGCGCTGCA GGCTGTCCTGGGCAC CTT GCGCCTGGGACAGGG TTTTCTGGGCCAGGC TERM 1162 961163 - 961178 + r 77 -4 -5.00884 | GCTCTCAGGCGACGC CTTCAT TCCA GTGAAG TTTTTTGCGCAGGGT ppnK 962027 - 961152 - | inorganic polyphosphate/ATP-NAD kinase TERM 1163 961257 - 961227 - G 72 -3.8 -4.56597 | overlap 961228 CTTGGGGTGCAAAAA CCGCATCTGATGCT CAG AGCGCCTGACGCTG ATGCGGTCGCCGTGC hrcA 962077 - 963090 + | heat-inducible transcription repressor TERM 1164 963207 - 963231 + F 100 -7.2 -5.252 | opp_overlap 963207 CGCTACATATGGAAA GCCTGCTATT CAAAA AATAGTGGGC TTTTTTGTGCCGCTG TERM 1165 963523 - 963503 - g 79 -11.1 -3.92592 | AGGTTGAAGAGGAAA CCGGCATCG TTG CCATGCCGG CCCAGATGCGCGATT ntpA 963319 - 963783 + | dATP pyrophosphohydrolase Pnap_0911 963818 - 965137 + | phospholipase D/transphosphatidylase TERM 1166 965862 - 965844 - g 100 -10.2 -5.1101 | overlap 965845 TGATCATGGAAAAAA CCCAGCCC GAC GGGCTGGC CATCGTGATGGAAGC TERM 1167 965861 - 965845 - g 81 -13.7 -3.65883 | overlap 965844 GATCATGGAAAAAAC CCAGCCC GAC GGGCTGG CCATCGTGATGGAAG Pnap_0912 965291 - 966013 + | GTP cyclohydrolase I Pnap_0913 966018 - 966440 + | BLUF domain-containing protein TERM 1168 966805 - 966823 + G 72 -3.9 -4.62069 | gap 1, opp_overlap 966805 966814 TGAGTCGCCCGGAAA TCCG-GAA CACC TTCGCGGA TTTTTGCGATGGGCG Pnap_0914 966504 - 967343 + | hypothetical protein Pnap_0915 967696 - 968193 + | transport-associated TERM 1169 968229 - 968217 - T 74 -10.5 -3.53012 | GCTGCTGCCTGCAAA CCGGC TGG GCCGG TCACAACTCGAACAT TERM 1170 968262 - 968291 + T 95 -14.3 -3.53091 | opp_overlap 968262 TGGACCGATAAAAAA GGCAGGCGATGGG TTGT TCCATGGCCTGCC TTTGCCGCGCCACCT TERM 1171 968291 - 968262 - T 100 -13.6 -5.28176 | opp_overlap 968262 TGGACCGATAAAAAA GGCAGGCGATGG GTTGTT CCATGGCCTGCC TTTGCCGCGCCACCT Pnap_0916 968654 - 968340 - | transport-associated TERM 1172 968737 - 968702 - R 77 -3.9 -5.12707 | opp_overlap 968733 GCAAAGTTTAAAAAA GCCTGTCGATTAACG GCACCA CGCCCATCGACCAGC ACCTGGTTTTTACAG TERM 1173 968733 - 968743 + r 78 -6.8 -4.59773 | opp_overlap 968702 CACCACGCCCATCGA CCAG CAC CTGG TTTTTACAGATCCAG Pnap_0917 969285 - 968836 - | hypothetical protein Pnap_0918 969677 - 969312 - | hypothetical protein TERM 1174 969548 - 969526 - G 70 -7.6 -3.97241 | overlap 969530 AGAAAAACGACCAAA GCCAGGATGG CGA CCACCCCCGC CACTGCACGCGCCAG Pnap_0919 970151 - 969747 - | hypothetical protein Pnap_0920 970392 - 970228 - | hypothetical protein Pnap_0921 971955 - 970615 - | multi-sensor signal transduction histidine kinase TERM 1175 971382 - 971369 - G 72 -2.3 -4.71061 | AGGTACATGTAAAAA GCCAG CAGT CCGAC CAGCGCCGTGGTGGC TERM 1176 971907 - 971930 + g 81 -10.2 -4.11216 | opp_overlap 971893 AGGCTGCGGCCAGCA CGGCCAGCGG CAGG CTGATGGCCG TTTTGAGCGTGGCAA Pnap_0922 972091 - 972723 + | two component LuxR family transcriptional regulator Pnap_0923 973252 - 972854 - | response regulator receiver protein TERM 1177 974114 - 974125 + G 74 -5.8 -4.4078 | GCACAGGGCGCTGAT CTGG ATGT CCAG TTTTCATTGGCCCCG Pnap_0924 973616 - 975628 + | AsmA family protein Pnap_0925 976430 - 975630 - | UBA/THIF-type NAD/FAD binding protein TERM 1178 976439 - 976421 - G 93 -8.8 -5.18355 | TGGAAAAATGAAAAA CCGCCG GCATGTG CGGCGG GAGGTTGATGGCTGC TERM 1179 976518 - 976479 - R 100 -15.8 -3.66356 | opp_overlap 976488, overlap 976483 976488 ACCGTGAAGTGCAAA TGAAGCAAAGCCCGTTCG AAAC CGGACGGGCTTTGCCTGA ACCAAGCGGTATGAA TERM 1180 976514 - 976483 - R 100 -18.8 -3.54489 | opp_overlap 976488, overlap 976479 976488 TGAAGTGCAAATGAA GCAAAGCCCGTTCG AAAC CGGACGGGCTTTGC CTGAACCAAGCGGTA TERM 1181 976488 - 976509 + r 89 -13.7 -3.64703 | opp_overlap 976483 976479 976488 TGCAAATGAAGCAAA GCCCGTTCG AAAC CGGACGGGC TTTGCCTGAACCAAG TERM 1182 976509 - 976488 - R 85 -11.5 -4.04394 | opp_overlap 976488, overlap 976483 976479 TGCAAATGAAGCAAA GCCCGTTCG AAAC CGGACGGGC TTTGCCTGAACCAAG Pnap_0926 977976 - 976537 - | carboxyl-terminal protease TERM 1183 976667 - 976679 + g 72 -2.6 -4.74539 | overlap 976654 AATTCGGGCGGACGG CGCT GCTCG GGCG TTTTCTTGGCTTCTT TERM 1184 977696 - 977717 + g 72 -2.1 -4.77567 | AAGCGGCCCGAGGTA CCTTCGCGG AATT CCTTGTAGG TTTTCTTGTCGAAAT TERM 1185 978180 - 978145 - R 80 -9.1 -4.07535 | gap 2, opp_overlap 978155 978173, overlap 978147 978148 978150 AATGGTTACAAATAA GAGCAGCCAATGCGCCC GGTC GGG-GCATTGGCTGA-C AGGCTCAATCGCCTG TERM 1186 978179 - 978147 - R 86 -12.8 -3.62695 | gap 1, opp_overlap 978155 978173, overlap 978145 978148 978150 TGGTTACAAATAAGA GCAGCCAATGCGCCC GGTC GGG-GCATTGGCTGA CAGGCTCAATCGCCT TERM 1187 978178 - 978148 - R 90 -16.3 -2.77135 | gap 1, opp_overlap 978155 978173, overlap 978147 978145 978150 GGTTACAAATAAGAG CAGCCAATGCGCCC GGTC GGG-GCATTGGCTG ACAGGCTCAATCGCC TERM 1188 978176 - 978150 - R 79 -13.1 -2.92496 | gap 1, opp_overlap 978155 978173, overlap 978148 978147 978145 TTACAAATAAGAGCA GCCAATGCGCCC GGTC GGG-GCATTGGC TGACAGGCTCAATCG Pnap_0927 978979 - 978227 - | phosphoglycerate mutase 1 family protein Pnap_0928 979125 - 979511 + | rhodanese domain-containing protein TERM 1189 979517 - 979506 - f 75 -5.8 -4.56597 | overlap 979516 CTTCCGGTCGAAAAA GCCT GAAA AGGC GCCAAGCCCGCGTGC TERM 1190 979808 - 979764 - g 85 -10 -4.38712 | gap 1, opp_overlap 979771, overlap 979765 979801 GCGAGCGTCAGAAAA TGATGCAGATCAGCGGC-CGG CGCA CCGTGCCGCAAATCTTCATCG GCGCCACCCATGTCG TERM 1191 979807 - 979765 - g 76 -13.5 -3.22906 | gap 1, opp_overlap 979771, overlap 979764 979801 CGAGCGTCAGAAAAT GATGCAGATCAGCGGC-CGG CGCA CCGTGCCGCAAATCTTCATC GGCGCCACCCATGTC Pnap_0929 979631 - 979894 + | glutaredoxin 3 TERM 1192 979910 - 979939 + F 70 -6.5 -4.07568 | gap 2, overlap 979912 ACAAGCCGCCTCCAG TCTGCCTTGCCCG ACGGAC CGGGC-AGGC-GA TTTTCCCGGCGCAGA TERM 1193 980287 - 980272 - g 73 -3.2 -4.71776 | CAAGATCGAAGAAAA GACCGT GTTC ATGGTC GAGGCCAAGCAGGCC Pnap_0930 980063 - 980530 + | preprotein translocase subunit SecB TERM 1194 980745 - 980785 + G 71 -12.7 -3.05384 | gap 3 TACCTGCCCGGCATT GCCTTGCCCGCCAGCC-TGC TGTT GCAAGGC-GGCGG-CGAGGC TTCACTGGGCCAGGC Pnap_0931 980571 - 981629 + | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) Pnap_0932 982010 - 981681 - | cupin 2 domain-containing protein Pnap_0933 982921 - 982070 - | pantoate--beta-alanine ligase Pnap_0934 983866 - 982964 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 1195 983024 - 983063 + g 74 -12.8 -3.28712 | gap 1, opp_overlap 983023 983022 TGCGCGCACATAAGC CTCCATGG-CGCCGCGCAC GCT GGGCGCGCCGTCCATGAAG TTATGGACAAACCGG TERM 1196 983468 - 983482 + g 74 -5.6 -4.46615 | overlap 983467 983470 CAGCACGACCGCACT GCGCAG CGC CTGCTC TTTTGATTCGTGGTA Pnap_0935 984155 - 984451 + | hypothetical protein Pnap_0936 984879 - 984496 - | aspartate alpha-decarboxylase TERM 1197 984935 - 984914 - H 74 -2.3 -5.04222 | gap 1 CAAGGAAAGGAAAAA CTGCGCTGCA TTT TGCAACA-AG CCGCTGAAGAAGGAT Pnap_0937 985054 - 985929 + | nicotinate-nucleotide pyrophosphorylase Pnap_0938 985929 - 987062 + | quinolinate synthetase TERM 1198 987721 - 987763 + G 85 -5.5 -5.08824 | gap 2, opp_overlap 987726, overlap 987706 987705 CTTCATCGACACCGG CAACACGGGCGACG--GCCAG TTG CTGTCGGTGTCGCCCGAGCTG TTTTTTGACTGGCAG Pnap_0939 987194 - 988969 + | para-aminobenzoate synthase, subunit I Pnap_0940 989569 - 989024 - | protein-export protein SecB Pnap_0941 990093 - 989587 - | acetone carboxylase gamma subunit TERM 1199 990144 - 990124 - R 83 -15.4 -2.75074 | overlap 990121 TTTAGGCCAACAGGA GCCGGGGG ACTGG CCCCCGGC GTCGAATCACTCTTC Pnap_0942 992475 - 990151 - | hydantoinase B/oxoprolinase TERM 1200 992024 - 992007 - G 71 -5.5 -4.36914 | TGCCTTCCCAGAAAA TCGGCAC GATG GTGGCGA TGTCGCAGGGATGGA Pnap_0943 994634 - 992487 - | hydantoinase/oxoprolinase TERM 1201 993893 - 993903 + g 78 -6.8 -4.59773 | CGTGCTTCTTGAAGC GGTC GCT GACC TTTTTCAAGGTGGCG TERM 1202 994608 - 994569 - G 100 -13.6 -5.24129 | gap 1 CTCCCTGACAAAAAA GGTGTCGGTCATCG-TGCC GCC GGCATCGATGCCCATCACC TGGACGGGTGAGCTG TERM 1203 995793 - 995760 - g 83 -15.3 -3.14132 | gap 1 CGGTTTCCCGATCAA GGCCAACGAGCGCGCC GCC GCCGCGCT-GCTGGCC CGGGGCATCGACTTC TERM 1204 996846 - 996827 - g 71 -8.5 -3.93768 | opp_overlap 996833 ATGCCGAAGAAAACA GCCCGGC TCCCAC GCCAGGC ATCGGCAAACTCGAA Pnap_0944 995002 - 997023 + | Fis family GAF modulated sigma54 specific transcriptional regulator Pnap_0945 997831 - 997184 - | DTW domain-containing protein TERM 1205 998018 - 998003 - g 81 -6.8 -4.72188 | gap 1, opp_overlap 998012, overlap 998005 CGAACCGAAAAGAAA CG-GCGC CTT GCGCGCG CAGCGGCTTTCACCG TERM 1206 998235 - 998262 + G 75 -4.2 -4.8048 | gap 2 AGCACCTGGACCTGT TCGAGC--GCGG CATTGC CCGCAAGCTCGA TTTTTCCTATGCCGG Pnap_0946 997949 - 999607 + | malonate decarboxylase alpha subunit TERM 1207 1000126 - 1000080 - g 73 -11.2 -3.63515 | opp_overlap 1000086 1000112 1000119 GGTGACCGGCAACAA GGGCGAACGCGCCTGCCGCGAC TTT GGCGTGCCTGGCGCGCGCGGCC AGGCGCAGGCCGGCT Pnap_0947 999607 - 1000491 + | triphosphoribosyl-dephospho-CoA synthase TERM 1208 1000762 - 1000780 + G 70 -10.2 -3.61178 | CGCCGGGCGTGGTCG GCATGCGC GTG GCGCAGGC TTTCCAGTCGCTGGG Pnap_0948 1000500 - 1000823 + | malonate decarboxylase subunit delta Pnap_0949 1000820 - 1001698 + | malonate decarboxylase subunit beta Pnap_0950 1001691 - 1002497 + | malonate decarboxylase gamma subunit Pnap_0951 1002494 - 1003186 + | phosphoribosyl-dephospho-CoA transferase Pnap_0952 1003183 - 1004118 + | acyl transferase domain-containing protein TERM 1209 1004159 - 1004202 + T 91 -15.4 -3.05384 | gap 1, opp_overlap 1004164, overlap 1004162 GACTTTTCAGCATGA AATA-AGCCTCTTGCGCAGGC GTG GCCTGCGCAAGAGGCTATGAA TTCAGTAGCAAAAAA TERM 1210 1004162 - 1004198 + T 100 -25.3 -2.54896 | opp_overlap 1004164, overlap 1004159 TTTTCAGCATGAAAT AAGCCTCTTGCGCAGGC GTG GCCTGCGCAAGAGGCTA TGAATTCAGTAGCAA TERM 1211 1004196 - 1004164 - T 100 -27.9 -4.0274 | opp_overlap 1004162 1004159 TTCAGCATGAAATAA GCCTCTTGCGCAGGC GTG GCCTGCGCAAGAGGC TATGAATTCAGTAGC TERM 1212 1004228 - 1004218 - T 78 -2.4 -5.1861 | opp_overlap 1004218 TTCAGTAGCAAAAAA CCGC TGG GCGC TTTGCATTCCGTGAT Pnap_0953 1005042 - 1004269 - | malonate/sodium symporter MadM subunit Pnap_0954 1005458 - 1005039 - | malonate transporter MadL subunit Pnap_0955 1006556 - 1005642 - | LysR family transcriptional regulator TERM 1213 1005926 - 1005912 - G 70 -10 -3.66178 | GCCGGCAATGCGAAA GGCTTC GAT GAAGCC GGAGTAGGTGGCAAA Pnap_0956 1008308 - 1006731 - | L-aspartate oxidase TERM 1214 1008369 - 1008344 - R 85 -2.4 -5.48163 | overlap 1008345 1008347 AAACAAAGGAAAAAA TCAGGCCGGC GTGTAG GCCAGCCGCA CATAAATCGGCGCGA Pnap_0957 1009195 - 1008344 - | chromosome segregation and condensation protein ScpA TERM 1215 1008718 - 1008702 - G 82 -3.5 -5.14563 | overlap 1008703 TGCGCCAGCAAAAAA TCGCGGC CCA GCTGCGG CACGGTGTTGAGCTT TERM 1216 1009257 - 1009246 - R 78 -2.2 -5.24129 | opp_overlap 1009251 1009252, overlap 1009250 1009251 TGCTGCTATAAAAAA CAGA GCTG CCTG CGCCGGCGCCTTGCC Pnap_0958 1009512 - 1009294 - | hypothetical protein Pnap_0959 1009631 - 1010143 + | putative lipoprotein Pnap_0960 1011880 - 1010210 - | sulphate transporter TERM 1217 1010302 - 1010314 + g 74 -4.8 -4.62302 | CCAGGCGGCCGCCGC GCGA CACAA TCGC TTTTTGCAACTGTTC TERM 1218 1010624 - 1010612 - G 73 -3.3 -4.72986 | CACCGTCAGGAAAAA CGTGC CCA GCATG ATCAGCCGGTAGTGG TERM 1219 1010757 - 1010707 - G 100 -16.1 -4.3586 | gap 1 CGACGTACAGCAAAA TGCCGGCCAGCACCGCCAGCGGCA CATG CACCGCCAGCGGCGC-GGCCACCA GCACCACCGTGACCA TERM 1220 1012065 - 1012041 - R 100 -14.4 -5.55769 | opp_overlap 1012059 CTGGACAAGAAAAAA CCCCAAGCAA ATCAA TTGCTTGGGG TCAGGTCTTGGCGGA TERM 1221 1012202 - 1012167 - R 78 -2.4 -5.18726 | opp_overlap 1012179 CCCCCATAAGAAAAA GTGTACCCGTGCGGGC GTCA GCACAAACTGACACAC TATTCAATCGCCTCT TERM 1222 1012285 - 1012269 - R 100 -7.2 -5.45652 | AGCGCCAACAAAAAA CCCAGC GCATG GCCGGG TAATGATTTGTGCAG Pnap_0961 1014401 - 1012476 - | peptidase S14, ClpP Pnap_0962 1015252 - 1014356 - | hypothetical protein TERM 1223 1015507 - 1015450 - R 100 -26.1 -3.55622 | opp_overlap 1015450, overlap 1015459 CTTAACCCCTCGAAA GTGTCGAAAGTGTCGAAAGTCTTAA TTGCTTGG TTAAGGCTTTCGACACTTTCGACAC TTTCGATAGGGGTAA TERM 1224 1015450 - 1015507 + r 100 -29.7 -3.65351 | opp_overlap 1015450 1015459 CTTAACCCCTCGAAA GTGTCGAAAGTGTCGAAAGTCTTAATT GCTT GGTTAAGGCTTTCGACACTTTCGACAC TTTCGATAGGGGTAA TERM 1225 1015498 - 1015459 - R 81 -12.4 -3.5936 | opp_overlap 1015450, overlap 1015450 TCGAAAGTGTCGAAA GTGTCGAAAGTCTTAA TTGCTTGG TTAAGGCTTTCGACAC TTTCGACACTTTCGA Pnap_0963 1017158 - 1015611 - | hypothetical protein TERM 1226 1016571 - 1016602 + g 84 -11.5 -4.16842 | opp_overlap 1016570 ATCACCCGTGAACAG CCGTGGTGCCCGG ATTTCC TCGGGCATCTCGG TTTCTTCGCGCTCGA TERM 1227 1016663 - 1016691 + g 72 -4.3 -4.56597 | overlap 1016664 GTTCCTTGGCCTTGG CCGCGTCCTGCAG CAG CCGCTCGACGCGC TTTTTCGCCACGGCC Pnap_0964 1017991 - 1017155 - | hypothetical protein Pnap_0965 1018302 - 1017988 - | hypothetical protein Pnap_0966 1018608 - 1018306 - | hypothetical protein Pnap_0967 1019019 - 1018612 - | hypothetical protein TERM 1228 1018875 - 1018844 - G 74 -5 -4.59773 | overlap 1018828 1018848 GTCGATTTGCAAAAA CCGACGCACCCATC GTCA AATGAGGGCGGCAG CTCGAACGGGTTGAC TERM 1229 1019000 - 1018973 - G 91 -9.2 -4.39571 | gap 1, opp_overlap 1018973 GGCACAAATTCAAAA GCCGCAGACCA TATGCGG TGG-CTGCGGC TTACGTCGCAGGATG TERM 1230 1019135 - 1019166 + G 83 -5 -5.08255 | gap 1 TGCGTATTTTTGATA GCCGTCGTGGTGGTG TGG TAGC-CCCCGGCGGC TTTTCTTTTGGGCGT Pnap_0968 1019035 - 1019367 + | hypothetical protein Pnap_0969 1020432 - 1019575 - | hypothetical protein TERM 1231 1020377 - 1020394 + g 76 -7.7 -4.25848 | gap 1, opp_overlap 1020342, overlap 1020365 AAGGAGTCCCAGCAG GCCAG-CC GGG GGTCTGGC TTTTCGTCCGAGCTT Pnap_0970 1021659 - 1020439 - | phage integrase family protein TERM 1232 1021823 - 1021809 - R 100 -11.4 -5.90981 | TGAGACGAAAAAAAA CCCCCT AAT AGGGGG TTCCGGCGGAAGCGG Pnap_0971 1022634 - 1021978 - | urease accessory protein UreG Pnap_0972 1023371 - 1022673 - | urease accessory protein UreF TERM 1233 1023317 - 1023288 - G 86 -7.7 -4.71426 | gap 1 TTCCGAGTAAGAAAA CCCGCC-CACGGGC AAG GCCGGGGAGGCGAG CCAGATCAGCTGGAG Pnap_0973 1023994 - 1023368 - | UreE urease accessory domain-containing protein TERM 1234 1023768 - 1023719 - G 72 -12.2 -3.27525 | overlap 1023714 GCGGGTCAAATCGAA CGCCG-AGCCGTGCGACGCGCA GGCCGTGA TGCGCAGCAC-CGGCTGCGGCG CGGCAATCACCCGTA ureC 1025720 - 1024002 - | urease subunit alpha TERM 1235 1024861 - 1024883 + g 73 -12.7 -3.12351 | gap 1, opp_overlap 1024859 1024858 ACGCGCAAAATATCG GGCGCGTGGC CGCC GCC-CGCGCC TTCGGTGTGAAACGC ureB 1026025 - 1025720 - | urease subunit beta Pnap_0976 1026632 - 1026039 - | HupE/UreJ protein ureA 1027053 - 1026751 - | urease subunit gamma TERM 1236 1027371 - 1027394 + G 73 -11 -3.56092 | opp_overlap 1027370 ACGATGGAAGACTAC GCGCTGCG CTTCACGC CGCAGCGC TTTCGCAAATGGTCG TERM 1237 1028239 - 1028259 + G 73 -12.5 -3.1829 | opp_overlap 1028236, overlap 1028237 1028254 TTCCGAATTACAGCT GGGCCGTGG GCG CCACGGCGC TGTTCGTCGTGGTGT TERM 1238 1028997 - 1029008 + G 72 -2.2 -4.78107 | gap 1, opp_overlap 1028997, overlap 1028997 CCTTTCCTGGACAAC G-GGC TGA GCCAC TTTTTGCTGCTGATG Pnap_0978 1027200 - 1030727 + | integral membrane sensor hybrid histidine kinase Pnap_0979 1030720 - 1031730 + | response regulator receiver protein Pnap_0980 1032077 - 1032316 + | hypothetical protein TERM 1239 1032342 - 1032323 - f 95 -15 -3.68351 | TGCGCATGATGCAAA GCCAGCCC GTGT GGGCTGGC GACACAAAATAATTT Pnap_0981 1032387 - 1032644 + | translation initiation factor IF-1 TERM 1240 1032734 - 1032754 + T 91 -4 -5.60993 | gap 1 CAGCATCACTCATGG CGGAG-ACG GGCA TGTGCTCCG TTTTTTTGTCCAGCA Pnap_0982 1034072 - 1032714 - | C4-dicarboxylate transporter DctA TERM 1241 1033147 - 1033133 - G 70 -10 -3.65351 | CCATCGTCAGGTAAA TCGACG TGC CGTCGA GGTTGAACGAATAGC Pnap_0983 1034297 - 1034581 + | hypothetical protein Pnap_0984 1036960 - 1034639 - | DEAD_2 domain-containing protein TERM 1242 1035077 - 1035097 + g 72 -3.9 -4.60487 | GATCAGCGGGTAACG CTGCCTGAA GCA TTCCGCCAG TTTTTCCAGGTAGTC TERM 1243 1035401 - 1035377 - G 71 -11.4 -3.53012 | gap 1, overlap 1035392 GCGGGCGGCGGCAAA GCGCGGCGCCA GGAA CGGCGCCG-GC ACCACATTGCGGATG TERM 1244 1035562 - 1035551 - G 88 -7.2 -4.90778 | overlap 1035552 CGCATCGAAATAAAA GCGC TGAA GCGC CGCGTCCACGCGCGT TERM 1245 1036549 - 1036524 - G 91 -3.1 -5.40072 | opp_overlap 1036525 1036528, overlap 1036525 1036526 TGCGCTTCAAAAAAA TCCCTGAGCGC ATCG GCGCTCATGCG TTCGGTCAGCAGCGT Pnap_0985 1037608 - 1037018 - | signal transduction protein TERM 1246 1037060 - 1037081 + g 73 -8.7 -4.03234 | gap 1, opp_overlap 1037074, overlap 1037073 CGTGTCGAATTCCTC CCGGGACAGG AAA CC-GTCCTGG TTTGTGTCGGCCCGG Pnap_0986 1037694 - 1038086 + | hypothetical protein TERM 1247 1038207 - 1038219 + G 100 -6.3 -5.47399 | overlap 1038204 CCGGCATCGATGCCG TTACC ATG GGTAA TTTTTTTAGCCTTCC TERM 1248 1038766 - 1038784 + G 93 -3.1 -5.61881 | TTTCGTCAGCTTTTT CATCATG CTGTA CCTGATG TTTTTCTTTTTGCGC Pnap_0987 1038158 - 1039342 + | hypothetical protein TERM 1249 1039336 - 1039361 + F 83 -9.8 -4.08767 | opp_overlap 1039303, overlap 1039326 1039323 GGTTGAGCCGCCGCC GGCCTGAATT TTCGAT GATTCAGGCC TTTTGCGCAGGTGGA TERM 1250 1039909 - 1039897 - g 77 -2.6 -5.00616 | overlap 1039899 TGGTCCTCCAAAAAA CACC GACCG GGCG ATGGCGACCTGCCTG Pnap_0988 1039564 - 1040067 + | hypothetical protein Pnap_0989 1040118 - 1041245 + | endonuclease/exonuclease/phosphatase TERM 1251 1042026 - 1042004 - g 81 -12.7 -3.72576 | gap 1 TGCTGGGCCAGGAAA GGCGGCTGGC CACC GCC-GCCGCC GAAATCATCGACATC TERM 1252 1042397 - 1042421 + G 93 -7.8 -5.19212 | gap 1 CATGGCCCTTGATTG CCGGCG-TGAC GCTG GCCAGCGCCGG TTTTTTGCTGGTCGT Pnap_0990 1041316 - 1042677 + | hypothetical protein TERM 1253 1042696 - 1042725 + G 75 -3.5 -4.8487 | gap 1, overlap 1042699 TCGAATTCGGCTGGC TGGGCGGC-GCACT GCT GGTGCTGCTGCTGA TTGTTTTTTTGCTCA Pnap_0991 1042674 - 1043447 + | band 7 protein Pnap_0992 1043795 - 1043487 - | ethyl tert-butyl ether degradation EthD TERM 1254 1043816 - 1043852 + H 71 -10 -3.60792 | overlap 1043817 TGTCTCCGGTCTGTT GTGTGGCTCGGCCCGC AAGGC GCGGGCCGGGATGCAA TTTACCAGTTGGGCG TERM 1255 1043817 - 1043851 + H 79 -13.5 -2.76261 | overlap 1043816 GTCTCCGGTCTGTTG TGTGGCTCGGCCCGC AAGGC GCGGGCCGGGATGCA ATTTACCAGTTGGGC Pnap_0993 1043932 - 1045011 + | hypothetical protein TERM 1256 1045025 - 1045035 + T 77 -4.6 -4.89838 | overlap 1045003 GAAATTACGCCTGTT TCGG CTG CCGG TTTTGTATTTGTTAA TERM 1257 1045168 - 1045134 - T 75 -12.9 -2.60075 | gap 1, opp_overlap 1045134, overlap 1045133 GTTTTTTTAACCAAT CGCC-AGCCGCACCGG CTTC CCGATGCGGCTCAGCA TATTGACCAGCGTGT Pnap_0994 1045538 - 1045125 - | hypothetical protein Pnap_0995 1047618 - 1045609 - | hypothetical protein TERM 1258 1046492 - 1046512 + g 77 -2.6 -4.9725 | ATAATTTCTGAGAAG CGAGGAAT TACAT ATTCTTTG TTTTTCTCTGAAAAT TERM 1259 1046694 - 1046706 + g 72 -7.7 -4.22883 | opp_overlap 1046693 GATCATTCCAAAATG GCTGT GAG ACAGC TTCTTTTGCATCATA Pnap_0996 1049515 - 1047602 - | ATP-dependent OLD family endonuclease TERM 1260 1049565 - 1049549 - H 93 -9.4 -4.72986 | CATCGCGACGAAAAA GGCCTG TTTTC CAGGCC CCACCCAGCGAGATG TERM 1261 1049898 - 1049879 - g 70 -7.8 -4.07568 | GCTGTTCGCCGAAAA GACCAAGC AGCT GCTCGGCC AGGACAAGGTTTCCG Pnap_0997 1049613 - 1050896 + | twin-arginine translocation pathway signal TERM 1262 1050904 - 1050924 + F 83 -9.6 -4.08064 | opp_overlap 1050898 1050897, overlap 1050905 AGAAGTAACGCTGAT TCGGGGCC TCCGC GGCCCCGC TTTTGCAAGGAAATT TERM 1263 1050905 - 1050923 + F 81 -13.1 -3.04517 | opp_overlap 1050898 1050897, overlap 1050904 GAAGTAACGCTGATT CGGGGCC TCCGC GGCCCCG CTTTTGCAAGGAAAT TERM 1264 1051872 - 1051888 + G 95 -11.5 -4.4009 | overlap 1051869 GACTGGTATTTGCTG GCCGCCG TGC CGGTGGC TTTTCTGGCGTCGGC Pnap_0998 1050993 - 1052567 + | inner-membrane translocator TERM 1265 1052903 - 1052927 + G 77 -2.7 -5.09426 | overlap 1052911 CTGGGGCTACACCGG CATCCTGTCGC TGG GCCACGGCGTG TTTTTTGCGCTTGGC Pnap_0999 1052571 - 1053782 + | inner-membrane translocator TERM 1266 1053867 - 1053855 - g 74 -10.5 -3.68836 | overlap 1053853 1053850 AGCGTCAAAACAATA CCGCC TCG GGCGG GCGCAACGCCAGCAC TERM 1267 1054473 - 1054483 + G 74 -4.6 -4.59773 | opp_overlap 1054464 AGGAAACGGCGCGCA CGGC CGA GCTG TTTTTGACGCTCAAG Pnap_1000 1053779 - 1054657 + | ABC transporter related TERM 1268 1054714 - 1054737 + G 86 -6.6 -4.99947 | overlap 1054700 1054716 TTGGGCCTGCTGGCC GGGAATCGCC CGGC GGCGACTCAC TTTTCTTTGCTTCGC TERM 1269 1054811 - 1054762 - g 77 -4.4 -4.86731 | gap 2, opp_overlap 1054777, overlap 1054766 1054776 CTTCGCCAAAGAAAA GTAAGCAAAAGAAAGGCGACCCGG CTGT CTGGGTC-CCTTCGCTTCGCT-AC GGGCGACCTGCGCTG TERM 1270 1054798 - 1054776 - g 80 -5.5 -4.78981 | gap 1, opp_overlap 1054777, overlap 1054766 1054762 AGTAAGCAAAAGAAA GGCGACCCGG CTGT CTGGGTC-CC TTCGCTTCGCTACGG Pnap_1001 1054647 - 1054994 + | hypothetical protein Pnap_1002 1055157 - 1055852 + | ABC transporter related TERM 1271 1055878 - 1055907 + T 90 -12.9 -3.84451 | opp_overlap 1055878 1055884, overlap 1055884 TCCCCATCGTAAAAA GCAGAATGGGCCG CAAT CGGCCCATTTTTC TTTGGCTTTAGCAGG TERM 1272 1055907 - 1055878 - T 95 -10.7 -4.62069 | opp_overlap 1055878 1055884, overlap 1055884 TCCCCATCGTAAAAA GCAGAATGGGCCG CAAT CGGCCCATTTTTC TTTGGCTTTAGCAGG TERM 1273 1055901 - 1055884 - T 86 -12.7 -3.75505 | opp_overlap 1055878 1055884, overlap 1055878 TCGTAAAAAGCAGAA TGGGCCG CAAT CGGCCCA TTTTTCTTTGGCTTT TERM 1274 1055884 - 1055901 + T 100 -12.7 -5.34381 | opp_overlap 1055884 1055878, overlap 1055878 TCGTAAAAAGCAGAA TGGGCCG CAAT CGGCCCA TTTTTCTTTGGCTTT Pnap_1003 1056402 - 1055959 - | hypothetical protein Pnap_1004 1057402 - 1056572 - | urease accessory protein UreD TERM 1275 1057206 - 1057163 - G 100 -14.4 -4.11216 | gap 1 GGTCGAGCGGTAAAA GCG-CGTGGCGCCGGGCGTGG TGA CCAGGCCATGCGCCCCGGCGC CTGCAGTGAAGGCCA Pnap_1005 1060134 - 1057546 - | cyanophycin synthetase TERM 1276 1058241 - 1058215 - G 79 -10.8 -3.91897 | TGGCCCATCGACAAA CACCGTGCGC TTGCCCT GCGCGCGGTG CGTGGCCATCAGCGG Pnap_1006 1062368 - 1060134 - | cyanophycin synthetase TERM 1277 1060356 - 1060389 + g 79 -16.1 -2.53876 | gap 1, opp_overlap 1060367, overlap 1060367 CACCACCTGGTTTTG CCGCACATACA-CGGC CCG GCCGTTGTCTGTGCGG TGCGTTGCAATGGCC TERM 1278 1060956 - 1060986 + g 73 -11.1 -3.6682 | gap 2, opp_overlap 1060937 GTCGCAGATGGCGCG GCCCAC-C-GGGCGC GGC GCGCCCTGCGCGGGC TTTAAGTGCATCAGC TERM 1279 1061060 - 1061030 - G 74 -13.3 -3.31144 | gap 1, opp_overlap 1061028 CGTTGACCTCGACAA TCGCGCCGCCCTGC GCAT GCAGCG-GGCGCGA GATATCCTGCGCCAC TERM 1280 1062470 - 1062458 - H 80 -9.1 -4.1552 | CAGGGGGCGAATAAA GGCAG AGG CTGCC GGGCTGTCAGGTGTT TERM 1281 1062691 - 1062642 - H 90 -10.5 -4.371 | CGCACGATACCAAAA CCTTCCGGGAGCCCGGCCTGCAG ACTG CGGCAAGTCATGCTCACGGCAGG GAAAAGAAGTCAAAA TERM 1282 1063247 - 1063274 + G 75 -4 -4.72986 | overlap 1063256 GTGGCGCTTTGCCCG GCCCTACCGC TGGCAGTT GCTGTCGGGC TTTTTGCTGACGCTG TERM 1283 1063896 - 1063875 - g 81 -6.5 -4.72272 | gap 1, overlap 1063877 TTCGCGCAGGAAAAA CGCG-AGGCG CAG CGCTTTCGCG TCGTCAACCAGCACA Pnap_1007 1062711 - 1065065 + | ABC transporter related TERM 1284 1065541 - 1065561 + G 83 -6.7 -4.91511 | opp_overlap 1065524, overlap 1065542 GCGCTGGACCGGCCC TCGCGCCGG CTG CTGGAGCGG TTTTTATGATGAAAT Pnap_1008 1065088 - 1065570 + | hypothetical protein TERM 1285 1065894 - 1065913 + G 75 -2.8 -4.88405 | gap 1, overlap 1065897 1065898 CAACAAGTCCATTCG CA-ACCCGG ATT CCGGCTATG TTTTCTTTGCGGGTT Pnap_1009 1065673 - 1066068 + | hypothetical protein TERM 1286 1066192 - 1066163 - T 100 -13.7 -4.42619 | opp_overlap 1066169, overlap 1066151 1066164 CAAGAGGCTACAAAA TCAATAGCAGCCT GCGC AGGCTGCTATTGC GCAAGAGGCTCAAAA TERM 1287 1066191 - 1066164 - T 100 -17.2 -3.24848 | opp_overlap 1066169, overlap 1066163 1066151 AAGAGGCTACAAAAT CAATAGCAGCCT GCGC AGGCTGCTATTG CGCAAGAGGCTCAAA TERM 1288 1066169 - 1066186 + T 72 -11.3 -3.01712 | opp_overlap 1066164 1066163 1066151 GCTACAAAATCAATA GCAGCCT GCGC AGGCTGC TATTGCGCAAGAGGC TERM 1289 1066244 - 1066218 - T 74 -9.5 -3.63589 | gap 1, overlap 1066210 CAAAACATGCTCAAA CCCGCAACCTGA GCAC TCAGGTC-CGGG TGAAAGAGACGGGTT Pnap_1010 1068634 - 1066337 - | malic enzyme TERM 1290 1066740 - 1066724 - G 82 -5.7 -4.87786 | overlap 1066725 GGAATGCGACAAAAA GGCCACC TTG GGCGGCA GGCCGAAGCGGCGCA TERM 1291 1068681 - 1068698 + H 72 -4.1 -4.82901 | opp_overlap 1068674, overlap 1068682 1068684 GGCTAAAGGTAAAGG TTACTGC AGAT GCAGTGG TTTTTATGCCCGGCG TERM 1292 1068708 - 1068721 + G 93 -9.5 -4.81249 | CAGTGGTTTTTATGC CCGGC GATT GCCGG TTTTTCAGTTTAAAC Pnap_1011 1068704 - 1069891 + | hypothetical protein Pnap_1012 1070409 - 1069900 - | hypothetical protein TERM 1293 1070796 - 1070850 + G 72 -7.5 -4.13767 | gap 1, opp_overlap 1070845, overlap 1070797 CCAGGGCACGCGCCA TGCTGGGCGCCAGGCCGGCAGCGCAG CAGG CCGCGCAGCCGGCAAG-CGACGGGCG TTTTGCGCTCGGCCC TERM 1294 1070966 - 1070978 + G 78 -10.5 -4.07568 | CTGGGCGGCGATCTG GCGCC GGT GGCGC TTTTCGGCGGCGGCC Pnap_1013 1070453 - 1071436 + | hypothetical protein TERM 1295 1071627 - 1071638 + F 76 -3 -5.00616 | CGCCTGGGAAACGGT TGAT GGCG ATCA TTTTTTAAAACAACA TERM 1296 1072296 - 1072269 - g 81 -12 -3.86194 | gap 1, opp_overlap 1072278 AAGGGGTCTTATAAA CCGGACTCGGCCA AGG TGGCCG-GTGCGG TCATCGATGCGTTTA TERM 1297 1072724 - 1072754 + G 71 -8.3 -3.87815 | gap 1, opp_overlap 1072697 CGGCTACAAGCTGGG CTTCAAGCC-GGGC ATGC GCTCAGGCTCGAAG TTTGTCGAACTGACC Pnap_1014 1071690 - 1072802 + | putative substrate-binding periplasmic (PBP) ABC transporter protein Pnap_1015 1073752 - 1072817 - | LysR family transcriptional regulator TERM 1298 1074351 - 1074363 + G 71 -9.1 -3.75629 | GCGCGCCGGCGTCGA GCGCA TCA TGCGC TTTGCCTTCAAGCTG Pnap_1016 1073857 - 1074945 + | tartrate dehydrogenase Pnap_1017 1075146 - 1076060 + | hypothetical protein TERM 1299 1076681 - 1076651 - g 73 -6.8 -4.2558 | opp_overlap 1076654 1076671 GAGCCTGGAGGAAAA GCAGGCCATCAA CAAGGCC TTGCTGGCCAGC GGCGCCAGCATTTCC TERM 1300 1077470 - 1077449 - g 76 -8.1 -4.11216 | gap 1 TGGTTACTTTGAAAA GCTCGATGAC CTG GTCATC-AGC GGACCGACCTACACC Pnap_1018 1076175 - 1077521 + | hydroxypyruvate reductase Pnap_1019 1078553 - 1077549 - | hypothetical protein TERM 1301 1077673 - 1077697 + g 73 -2.8 -4.75472 | gap 1, overlap 1077675 AGTCCGGCAACGCGG TCCTTCACCGC CTGG GTGGCGA-GGA TTTTGTTGATCTCGC TERM 1302 1077779 - 1077762 - G 73 -6.3 -4.37092 | gap 1, opp_overlap 1077774, overlap 1077764 AGTGGGCGCATAAAA GCCGAACA CCG TGT-CGGC GTCAAAGCCCTTGAG Pnap_1020 1079748 - 1078630 - | FMN-dependent alpha-hydroxy acid dehydrogenase TERM 1303 1078796 - 1078776 - G 90 -8.9 -4.83615 | opp_overlap 1078773 1078776 1078778, overlap 1078777 GACGGCCCAGAAAAA CCGCCTTGG CAC CCAGGGCGA TGGCTTTGGCAATGT TERM 1304 1079017 - 1078993 - G 75 -13.6 -3.09635 | opp_overlap 1079014, overlap 1078995 1079012 ATCTTCAGGATGCAA CAGCCCCTTG AGTAG CAAGGGGCCG GGCCAGGACTTGCGA TERM 1305 1079015 - 1078995 - G 71 -12.6 -3.10796 | opp_overlap 1079014, overlap 1078993 1079012 CTTCAGGATGCAACA GCCCCTTG AGTAG CAAGGGGC CGGGCCAGGACTTGC TERM 1306 1079710 - 1079695 - G 76 -7.5 -4.35646 | ATAGTCAAAGACAAA CCGGG GCAGCG CCCGG CGGGCCTGGCAGCGA Pnap_1021 1080753 - 1079782 - | hypothetical protein TERM 1307 1080187 - 1080201 + g 74 -9.2 -3.86015 | opp_overlap 1080157 TGCCACGTCCTGGAC GGCGGG CGC TCCGCC TTTGTAAGGCACATG Pnap_1022 1082285 - 1080834 - | aldehyde dehydrogenase Pnap_1023 1083970 - 1082381 - | benzoylformate decarboxylase TERM 1308 1083177 - 1083201 + g 78 -2.8 -5.02074 | opp_overlap 1083170 1083175 AGCGCAAAGACCAGG TCGTGGCC GGCCAGCAG GGCGACGA TTTTTTCGCGCATCG TERM 1309 1084874 - 1084922 + G 71 -11 -3.53012 | gap 1, overlap 1084852 1084851 ACGCCATCATCGAGC CGCCGTTTCCGCTGC-GCGAC TTCACCGT GTCGCTGCACTGGAGCCGGCG TTTCGAAGCCGACCC Pnap_1024 1084087 - 1085004 + | LysR family transcriptional regulator TERM 1310 1085255 - 1085265 + T 71 -8.2 -3.78934 | opp_overlap 1085255 GGTCGTTTCGCAAGA CGCC AAT GGCG TTCTTGTCGAGCAGG Pnap_1025 1085802 - 1085386 - | hypothetical protein Pnap_1026 1086041 - 1086853 + | methyltransferase type 11 TERM 1311 1087012 - 1087023 + F 77 -7.2 -4.29738 | opp_overlap 1087000 TGACGGAGATTTCAG GCGC TCCG GCGC TTTTCCTGCCTGTCC TERM 1312 1087131 - 1087162 + F 73 -5.6 -4.56597 | overlap 1087130 TTGCAGCGTTTGCAG CCGCCTCCCGGCCG TTCC CGGAGAGCAGGCGG TTTTTCAGAGGGGAC TERM 1313 1087748 - 1087714 - g 100 -15.1 -4.50058 | gap 1 CATCCACAAGGAAAA GCT-GACGCCACCAGC ATCG ACTGGCGGCGTCGAGC TGTACCGAGCCGTCA Pnap_1027 1087316 - 1087987 + | XRE family transcriptional regulator Pnap_1028 1088092 - 1088844 + | extracellular solute-binding protein TERM 1314 1089081 - 1089095 + G 88 -4.2 -5.32396 | ATCTGCTGCGCGGCA TCCCGA TCA TCGTGA TTTTGTTTTTCCTGT Pnap_1029 1088888 - 1089538 + | polar amino acid ABC transporter, inner membrane subunit TERM 1315 1089952 - 1089927 - g 84 -8.1 -4.48987 | overlap 1089928 GGCCGAGAAGGAAAA CGCCCATCCGC CGCA GCTGTCGGGCG GCCAGCAGCAGCGGG TERM 1316 1090223 - 1090249 + G 75 -12.3 -3.62224 | gap 1, opp_overlap 1090221 1090222 ACAACCCCCAAAACC CGCGCACGCAGG ACTT CCTGCG-GCGTG TTCTTCACCCCATGT Pnap_1030 1089535 - 1090266 + | ABC transporter related Pnap_1031 1090277 - 1091572 + | FAD dependent oxidoreductase TERM 1317 1091624 - 1091604 - T 100 -11.1 -5.60993 | opp_overlap 1091604 CTGCGCATAAAAAAA GCCGGCG CATCAAT CGCCGGC TTTCGCAAGTCGAAA TERM 1318 1091604 - 1091624 + T 77 -11.1 -3.55444 | opp_overlap 1091604 CTGCGCATAAAAAAA GCCGGCG CATCAAT CGCCGGC TTTCGCAAGTCGAAA Pnap_1032 1092281 - 1091655 - | methyltransferase type 11 TERM 1319 1092363 - 1092335 - H 100 -9.5 -4.96646 | opp_overlap 1092337 GGATACAAGGAAAAA GAGGCATGGGAGA TGG CCTCGCCTGCCTC TTGCAAACAGCCGGA Pnap_1033 1092586 - 1092918 + | cytochrome c, class I TERM 1320 1092949 - 1092920 - T 77 -8.5 -4.2123 | gap 1, opp_overlap 1092911 TATTGACTCAATAAA CCCTGGAAGCCTGC GAA GCAGGCGGC-AGGG AAAATTGAGTCATTC Pnap_1034 1095399 - 1093000 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding TERM 1321 1094697 - 1094707 + g 73 -6.8 -4.30576 | opp_overlap 1094697 1094700 GGGTGCTCGAATACA CCAG CCA CTGG TTTTGCTCCTGCGGC TERM 1322 1095210 - 1095239 + g 90 -15.7 -3.72576 | gap 1, opp_overlap 1095225, overlap 1095211 TGTCGTCCACGTAGG TCGCG-GCGCCCAG AAC CTGGGCGCGCGCGC TTTCGTGAAAGCGCG TERM 1323 1095211 - 1095238 + g 91 -19.2 -2.83403 | gap 1, opp_overlap 1095225, overlap 1095210 GTCGTCCACGTAGGT CGCG-GCGCCCAG AAC CTGGGCGCGCGCG CTTTCGTGAAAGCGC Pnap_1035 1096916 - 1095396 - | molybdopterin dehydrogenase, FAD-binding TERM 1324 1097216 - 1097237 + G 72 -7.9 -4.11216 | gap 1 AGCTCCCGCAGCGCC GCCGC-GCCG CCC CGGCTGCAGC TTTTCGGCATCAGCA Pnap_1036 1097180 - 1098754 + | ABC transporter related TERM 1325 1099398 - 1099454 + G 76 -7.7 -4.25104 | gap 1, overlap 1099356 1099428 CTGTACCGCACCTAT GCCGGCTTTGCGC-AGGAGGTCAGCG GCCAGG CGCCGGCCGCCGCGCGCTACGCAGGC TTTTCATCGCGCCGC TERM 1326 1099428 - 1099485 + G 73 -13.2 -3.19602 | gap 1, overlap 1099398 1099468 GAGGTCAGCGGCCAG GCGCCGGCCGCCGCGCGCTACGC-AGG CTTTT CATCGCGCCGCGCGCTGTGGGTGGCGC TCTTGATCTCGGGCG Pnap_1037 1098744 - 1099826 + | inner-membrane translocator TERM 1327 1100023 - 1100053 + G 70 -10.4 -3.54741 | overlap 1100015 1100025 1100041 GGGCTTTGCCGCCGG CATGGCGGCCGG CGCCTTC CTGGCCGCCATC TTTGGCGGGCTGGTG TERM 1328 1100025 - 1100051 + G 74 -13 -3.35046 | overlap 1100015 1100023 1100041 GCTTTGCCGCCGGCA TGGCGGCCGG CGCCTTC CTGGCCGCCA TCTTTGGCGGGCTGG Pnap_1038 1099826 - 1100746 + | inner-membrane translocator TERM 1329 1101528 - 1101492 - g 80 -5.7 -4.7261 | opp_overlap 1101517 1101522, overlap 1101497 1101517 ATCCACCAAAAGAAA CCGAAGCCGCCACCG CGCTGAT CAACGGCGGCGCCGA CGTGCTGTTCCAGAA Pnap_1039 1100828 - 1101979 + | basic membrane lipoprotein TERM 1330 1101990 - 1102023 + F 72 -11.8 -2.70786 | opp_overlap 1101987 1101986 1101989 1101981, overlap 1101989 ACTGAAGATAATGAC GCGA-TGCTCCGCGCC CTAG GGC-CGGAGCGCTCGC ATTGTCAGTTTTGAG TERM 1331 1102038 - 1102053 + F 100 -10.4 -5.26119 | CATTGTCAGTTTTGA GCTGCC TTCG GGCAGC TTTTCTTTTTCAGGA Pnap_1040 1102076 - 1103116 + | adenosine deaminase TERM 1332 1103151 - 1103139 - f 85 -2.6 -5.58522 | CATAGAAAAGAAAAA CACC TTCAT GGCG CTGATCGAAAAACAG TERM 1333 1103204 - 1103164 - g 74 -4.6 -4.65895 | gap 1, opp_overlap 1103202 GCGCTGATCGAAAAA CAGGCAACCCGACCTACCG CATC CACTCCGTCGGGC-GCCTG GCCCATCGCACTGGC Pnap_1041 1103146 - 1104432 + | hypothetical protein Pnap_1042 1104559 - 1104942 + | hypothetical protein Pnap_1043 1105960 - 1104974 - | hypothetical protein TERM 1334 1105939 - 1105918 - G 89 -11.5 -4.33274 | CCGAGAGCATGAAAA GCGCGAGCC TGCA GGCCCGCAC AACCCAACTTAAAGC TERM 1335 1106246 - 1106274 + H 100 -11.7 -5.27335 | CCCTTAAAATACCTT CATCAGCGTGCTG TCC CGGTGCGCTGGTG TTTTTATTTCGGGGC TERM 1336 1106318 - 1106343 + G 81 -4.5 -4.99043 | opp_overlap 1106318, overlap 1106320 1106321 ACCATGTATAAAAAC CTCGCTGCCAC GCTC GTGGCCGCCTG TTTTATTTCTCCCGC TERM 1337 1106704 - 1106762 + G 89 -17.5 -3.11222 | gap 1, opp_overlap 1106702 1106703, overlap 1106705 1106715 GCGTTATTACGAAGG CCGTTACCTGGCCGGCATTGCCGC-CGG CCGG CTGAGCGGAAATGCCGGTTATGTGGCGG GTTTTCCGATTCCCG TERM 1338 1106715 - 1106751 + G 85 -15.2 -3.49668 | gap 1, opp_overlap 1106702 1106703, overlap 1106704 1106705 AAGGCCGTTACCTGG CCGGCATTGCCGC-CGG CCGG CTGAGCGGAAATGCCGG TTATGTGGCGGGTTT Pnap_1044 1106306 - 1107391 + | basic membrane lipoprotein TERM 1339 1107440 - 1107457 + G 86 -4.7 -5.12707 | overlap 1107441 1107442 1107452 AAGGCGAGGGCAGCC ATGCCGG CCGG CCGGCGA TTTTTTGCCGTTTCG Pnap_1045 1107388 - 1108023 + | hypothetical protein Pnap_1046 1108020 - 1108400 + | putative 6-pyruvoyl tetrahydropterin synthase TERM 1340 1109299 - 1109317 + G 82 -3 -5.1287 | opp_overlap 1109299 CAGCCCGACCAGCAA CCTGTTCC TGG GCAGCGGG TTTTTTGACTATGAA Pnap_1047 1108427 - 1109719 + | guanine deaminase Pnap_1048 1110046 - 1109747 - | hypothetical protein dcd 1110192 - 1110791 + | deoxycytidine triphosphate deaminase Pnap_1050 1111763 - 1110888 - | integral membrane protein TERM 1341 1111075 - 1111058 - G 85 -5.5 -5.02074 | CCAGGTTTGAAAAAA TCACCCG GATG CTGGTGA TGGCGGCTGAAACGG Pnap_1051 1112235 - 1111861 - | hypothetical protein Pnap_1052 1112647 - 1112279 - | TraR/DksA family transcriptional regulator Pnap_1053 1112816 - 1113682 + | integral membrane protein Pnap_1054 1113682 - 1113894 + | hypothetical protein TERM 1342 1113928 - 1113892 - T 71 -7.4 -4.06055 | gap 2, opp_overlap 1113906 1113908, overlap 1113896 ATGCTGGAAAGCAAA TAAAGCACGG--GCCGGC TTG ACCGGCGGCCATGCTTCA GGTCAGCTTATTTGC TERM 1343 1113924 - 1113896 - T 75 -6 -4.62772 | gap 2, opp_overlap 1113906 1113908, overlap 1113892 TGGAAAGCAAATAAA GCACGG--GCCGGC TTG ACCGGCGGCCATGC TTCAGGTCAGCTTAT Pnap_1055 1114636 - 1113950 - | outer membrane protein Pnap_1056 1114965 - 1115357 + | hypothetical protein TERM 1344 1116351 - 1116366 + G 74 -10.4 -3.73072 | CCACGGCACCAGCGC CCAGCG CCAA CGCTGG TTTGATGCCGGCCTT Pnap_1057 1115542 - 1116432 + | protein of unknown function, zinc metallopeptidase putative Pnap_1058 1117777 - 1116710 - | IS605 family transposase OrfB TERM 1345 1117102 - 1117154 + g 78 -3.4 -5.06414 | opp_overlap 1117071 1117106, overlap 1117108 1117111 TGCTGAGCTGGTGGT GAAAGTCGTTGCGGCGATGGGC CATCTGCGC GTGTATCGCCGTGACGCGTTTC TTTTTGTTCGCCCGC TERM 1346 1117514 - 1117529 + g 75 -3.2 -4.87665 | CTTCTTCCCGCGATA GCGC AACCAGGG GCGC TTTTTCTGGCTGCGC TERM 1347 1117986 - 1118005 + H 100 -16.4 -3.87869 | TGCCGCCCTCTACCT CCCCGGCC TGAA GGCCGGGG TTTCTCAGGAATTCA TERM 1348 1118212 - 1118193 - g 72 -4.3 -4.56597 | gap 1 GTGGTGTGCGAAAAA GGCGATGT GCTCG ACA-CGCC ATGGGTCACGGACCT Pnap_1059 1118025 - 1119035 + | UDP-glucose 4-epimerase Pnap_1060 1120028 - 1119132 - | transglutaminase domain-containing protein Pnap_1061 1121136 - 1120192 - | transglutaminase domain-containing protein TERM 1349 1121094 - 1121115 + g 81 -6.5 -4.72986 | CAGGACTTTGGTGGT GTGCAGCCT CAAG AGGGTGCGC TTTTTGATGCAAGTA Pnap_1062 1122135 - 1121203 - | hypothetical protein Pnap_1063 1123228 - 1122230 - | transglutaminase domain-containing protein Pnap_1064 1125777 - 1123225 - | hypothetical protein TERM 1350 1123306 - 1123273 - G 83 -5.2 -5.08824 | overlap 1123275 GGTGTAGCTAAAAAA CTGCACGCTGATGT GCTCTG ACATCTGCGCACTG GCAATCTGGATACGG TERM 1351 1125620 - 1125636 + g 81 -13.7 -3.57462 | TCGCGCACCTGGCGT CGCACCG ATT CGGTGCG TTTGCGCATGACGTC TERM 1352 1125832 - 1125804 - R 100 -19.7 -4.56597 | opp_overlap 1125804 TTTCTCTTGCAAAAA CGCGGATGGCTCA GAA TGAACCATCCGCG TTGTGGGACGCGCCA TERM 1353 1125804 - 1125832 + r 100 -17.5 -3.28712 | opp_overlap 1125804 TTTCTCTTGCAAAAA CGCGGATGGCTCA GAA TGAACCATCCGCG TTGTGGGACGCGCCA Pnap_1065 1129221 - 1125856 - | transglutaminase domain-containing protein TERM 1354 1127428 - 1127440 + g 74 -4.7 -4.67038 | AGGTTTCCTGGCCTT GAGGG CGG CCCGC TTTTCCTTTTGCCCG TERM 1355 1128073 - 1128096 + g 91 -5.2 -5.252 | overlap 1128075 ATTTTTCAGGCGGTG CATGAGCTGG CCGG CCAGTTCGCG TTTTTTATCGCCGTG TERM 1356 1128212 - 1128236 + g 93 -8.6 -5.04987 | CGCTTCAGATCCGCG TCAACCTGCT GGCCG AGCAGGTCGA TTTTTTGCCAGTCTT Pnap_1066 1131118 - 1129538 - | hypothetical protein TERM 1357 1131140 - 1131163 + r 70 -5.1 -4.45175 | opp_overlap 1131140 AATCCTCAATAAAAA CCCGCCCTG CAGGAT CTGGACGGG TTTGATTTTTTGGTG TERM 1358 1131163 - 1131140 - R 91 -7.3 -5.08088 | opp_overlap 1131140 AATCCTCAATAAAAA CCCGCCCTG CAGGAT CTGGACGGG TTTGATTTTTTGGTG TERM 1359 1131574 - 1131550 - R 100 -12.9 -5.21709 | opp_overlap 1131550 GGGCACATGAAAAAA GGGACAGACCA TGA CAGTCTGTCCC TTTTTATTTGGTGCC TERM 1360 1131550 - 1131574 + r 100 -11.5 -5.33405 | opp_overlap 1131550 GGGCACATGAAAAAA GGGACAGAC CATGACA GTCTGTCCC TTTTTATTTGGTGCC Pnap_1067 1132678 - 1131671 - | fructose-1,6-bisphosphatase Pnap_1068 1135472 - 1132725 - | aminopeptidase N TERM 1361 1133181 - 1133145 - G 70 -10.3 -3.55548 | gap 3, overlap 1133135 GAACATGGCGTGAAA CAGC-GCCA-GCGCCTGG TCTG CCAGG-GCATGGCTGCTG GACACCAGCGCGGCC TERM 1362 1133957 - 1133983 + g 71 -10.8 -3.53444 | opp_overlap 1133946 CAAACGGCTCCTTGA CCGGCTGGCC CGGCGTC GGCCAGCAGG TTTGCGACAGCGTCA TERM 1363 1134254 - 1134272 + g 72 -2.3 -4.75372 | gap 1, overlap 1134255 CCAGCGTCTGCATCA TGCGCACG ACTT CG-GCGCC TTTTTCGTAAATCGT TERM 1364 1135125 - 1135137 + g 72 -4.1 -4.56597 | overlap 1135119 GCTGACGTACAGGCC CATCA GCT TGGTG TTTTTGGACGGGCAG Pnap_1069 1136569 - 1135526 - | peptide chain release factor 2 Pnap_1070 1137928 - 1136720 - | response regulator receiver sensor signal transduction histidine kinase TERM 1365 1137467 - 1137494 + g 100 -6.3 -5.40072 | gap 1, overlap 1137464 GGAGATTTGCAGCTT CTG-CAGCAGCG CGTCC TGCTGCTGGCGG TTTTTTTCGAGAGCC Pnap_1071 1138521 - 1137922 - | CheB methylesterase TERM 1366 1138462 - 1138435 - G 71 -9 -3.8062 | overlap 1138432 CAAGCCGGAGAACAA GGCCAGCAGGGC CTGC ACGCCGCCGGCC GAAGCGCCAATCACG Pnap_1072 1139429 - 1138518 - | MCP methyltransferase, CheR-type TERM 1367 1139364 - 1139410 + g 91 -6.2 -5.25735 | overlap 1139365 1139366 CTCCGGCACGGCTGC CGCCGGGTTGCCCAGCGGGGCG CTG CCCCACGCAGGCCAGTCCGGGA TTTTTGCTTTTTTCG TERM 1368 1139365 - 1139409 + g 71 -9.7 -3.73001 | overlap 1139364 1139366 TCCGGCACGGCTGCC GCCGGGTTGCCCAGCGGGGCG CTG CCCCACGCAGGCCAGTCCGGG ATTTTTGCTTTTTTC Pnap_1073 1142908 - 1139432 - | multi-sensor hybrid histidine kinase TERM 1369 1140138 - 1140118 - G 74 -4.6 -4.67353 | overlap 1140120 TCATGCAGTCAAAAA TGGTGCCG GCCAG CAGCGCCA GCGCTTCCCCGCCGG TERM 1370 1140635 - 1140601 - G 78 -15.6 -2.71144 | CATCGTCTTCAATCA CCAGCACCAGGCGGCC GCT GGCGGCCCGGTGGCGG TCGTCGGGAAAGGTC TERM 1371 1140787 - 1140758 - G 72 -12.1 -3.26471 | gap 1 CGATTCGGACAGCAA CTGCCGCTGGCTCC AGA GG-GCCGGCAGCAG CAGCGTGAAGACGCT TERM 1372 1141120 - 1141157 + g 74 -2.6 -4.82901 | opp_overlap 1141114, overlap 1141120 CTGACACCAGCGTGG CC-GGCGTGCCCGGCTCG ACCA CGA-CCTCGAACGCCAGG TTTTTCTGGCCGGCC TERM 1373 1143040 - 1143001 - R 76 -10.6 -3.72893 | gap 1, overlap 1143002 CATCCGTTCAGGAAA TCCTCGATCAG-CCGGGCC AGC GGCCCGGGCTGGTCATGGT GCAGCATGTGGCCGG TERM 1374 1143039 - 1143002 - R 83 -14.1 -2.83522 | gap 1, overlap 1143001 ATCCGTTCAGGAAAT CCTCGATCAG-CCGGGCC AGC GGCCCGGGCTGGTCATGG TGCAGCATGTGGCCG Pnap_1074 1143926 - 1142985 - | alpha/beta hydrolase fold TERM 1375 1144150 - 1144163 + r 100 -8.1 -5.15969 | opp_overlap 1144150 GCGGGCATAAAAAAA GCACC CGAA GGTGC TTTTTTGGGTTAACC TERM 1376 1144163 - 1144150 - R 100 -8.1 -5.60993 | opp_overlap 1144150 GCGGGCATAAAAAAA GCACC CGAA GGTGC TTTTTTGGGTTAACC TERM 1377 1144209 - 1144234 + r 71 -4.5 -4.56597 | opp_overlap 1144196, overlap 1144211 AACGCGGAGCCGGCT CGGCCACGTAG ATCT CGACGCGGCGG TTTTTGGCGCGGCCC Pnap_1075 1144854 - 1144192 - | OmpA/MotB domain-containing protein TERM 1378 1144973 - 1144953 - H 91 -9.7 -4.66938 | AGTTGTAAGACAAAA GCGCCAG TTGAATG CTGGCGC ACGCTGTATTTGCTG TERM 1379 1145015 - 1145050 + H 73 -6.1 -4.39828 | opp_overlap 1145014 1145015 GCGTTTTTTTGAAAC TTGCCGGCATGAG CCCATGGCCA CCCACGCCGGCAA TTTTCTCCCACTATT Pnap_1076 1145023 - 1146141 + | aldo/keto reductase TERM 1380 1146272 - 1146298 + G 100 -18 -3.57561 | opp_overlap 1146282 CTGGAGCACGGCGGC GCCCAGCACAGC GCG GCGGTGCTGGGC TTTGACCCGTTCAGC Pnap_1077 1146167 - 1146658 + | ybaK/ebsC protein TERM 1381 1147061 - 1147077 + G 84 -10.9 -4.15833 | overlap 1147065 AGCTGGGTGCTGGGC GTTGCCA CGC TGGCAAC TTTTGGGATCGTGGT TERM 1382 1147229 - 1147194 - g 71 -4.6 -4.4017 | gap 1, opp_overlap 1147201 1147215 GGAATGTCGATAAAA GCATCGTGCTGGC-GCT GGT AGCCATCAGCGCGCTGC TGGTCTATCGCCACC Pnap_1078 1146677 - 1147327 + | hypothetical protein Pnap_1079 1147986 - 1147330 - | hypothetical protein TERM 1383 1147533 - 1147543 + g 77 -2.4 -4.99861 | overlap 1147513 CCGTGGACATCTGCA CGGC CTG GCCA TTTTTGTAGTTGATG Pnap_1080 1148483 - 1147992 - | nucleotide-binding protein TERM 1384 1149052 - 1149064 + G 70 -10.5 -3.57144 | opp_overlap 1149044 TCAAGCATGCCAGCT CCGGC GCC GCCGG TTTCGGCCTGGCCGG Pnap_1081 1148535 - 1149587 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1385 1149635 - 1149610 - T 100 -15.5 -5.252 | GATGCGCAGAAAAAA GCCGCCTCAAC GTGA ATTGAGGCGGC TTGCAATGGCTACGC Pnap_1082 1151002 - 1149665 - | argininosuccinate synthase TERM 1386 1150115 - 1150140 + g 84 -11.1 -4.14739 | gap 1, opp_overlap 1150108 1150105 1150103 GAACAGCAGCGCCAA GCCGGGCGCCTC GTA GATGC-CCCGGC TTTTCGCCTCGATGA Pnap_1083 1151362 - 1151036 - | hypothetical protein Pnap_1084 1151498 - 1152082 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1387 1152132 - 1152096 - g 75 -2.8 -4.91459 | gap 1, overlap 1152097 GAACATTCATAAAAA TGCTTCGCTGGTGGACC AGCT GG-CCGCCAGCTATGCG CTGGGCACCTTGCGC TERM 1388 1152149 - 1152165 + G 86 -15.1 -3.54424 | TGGGCACCTTGCGCG GCGGCGC GCG GCGCCGC TTTGAAACGCTGGCC TERM 1389 1152399 - 1152422 + G 78 -6.7 -4.58663 | gap 2, overlap 1152374 CAGCCTGGGCCTGTG GCG-CGG-CGC TGCG GCGGCCGGCGC TTTTTCGACCGTGGT Pnap_1085 1152079 - 1152861 + | putative transmembrane protein TERM 1390 1152909 - 1152869 - T 72 -12.2 -2.57795 | gap 1, opp_overlap 1152881, overlap 1152881 CCGAGTAGGAAGCCA GTCATGAAAAAAGGACGTT TAAA AACGTCCTTTTTTCATT-C AAGTGAACACTCAGC TERM 1391 1152898 - 1152881 - T 100 -9.9 -5.1675 | opp_overlap 1152881, overlap 1152869 CCAGTCATGAAAAAA GGACGTT TAAA AACGTCC TTTTTTCATTCAAGT TERM 1392 1152881 - 1152898 + T 100 -9.9 -5.27477 | opp_overlap 1152869 1152881 CCAGTCATGAAAAAA GGACGTT TAAA AACGTCC TTTTTTCATTCAAGT Pnap_1086 1153636 - 1152920 - | 17 kDa surface antigen TERM 1393 1153761 - 1153749 - R 74 -10.5 -3.53012 | TGGCCGCTCTGTAAA GCCGG TGG CCGGC CCGGCTCAAACGCGC Pnap_1087 1154111 - 1153767 - | arsenate reductase and related TERM 1394 1154054 - 1154066 + g 83 -4.7 -5.04385 | opp_overlap 1154054, overlap 1154036 GGCCGCGTTCCGAAA GCCAG GCC CGGGC TTTTTTGACGGTGTC Pnap_1088 1154205 - 1155185 + | proline iminopeptidase TERM 1395 1156456 - 1156473 + G 72 -2.7 -4.71382 | gap 1 TCATGGCGGCAAACC CCGCTGAT AGA ATC-GTGG TTTTTGGCTCCTTCT Pnap_1089 1155192 - 1156553 + | FolC bifunctional protein Pnap_1090 1156642 - 1157640 + | sporulation domain-containing protein TERM 1396 1157832 - 1157852 + G 81 -10.3 -4.16681 | overlap 1157821 GCAGTCGGCTTCGGA GCCGGTGCG TTA CGCGGCGGC TTTTGCGCTGGTGTT Pnap_1091 1157656 - 1158141 + | colicin V production protein Pnap_1092 1158187 - 1159716 + | amidophosphoribosyltransferase Pnap_1093 1159718 - 1160932 + | O-succinylhomoserine sulfhydrylase TERM 1397 1161303 - 1161288 - g 76 -6.8 -4.43477 | gap 1 GGCAGCCAAGGAAAA GCCG-CG CTA CGACGGC ACCTGGCGGCCCGAG Pnap_1094 1160929 - 1162323 + | glutamyl-tRNA synthetase TERM 1398 1162777 - 1162805 + T 93 -12.5 -3.93782 | opp_overlap 1162777 CTCCGCCAGATTGAA GCCCTTGCAGTTC CAT GAATTACAAGGGC TTTCCTCTTAGATCC TERM 1399 1162805 - 1162777 - T 81 -12.5 -3.12351 | opp_overlap 1162777 CTCCGCCAGATTGAA GCCCTTGCAGTTC CAT GAATTACAAGGGC TTTCCTCTTAGATCC TERM 1400 1163138 - 1163163 + T 100 -10.5 -5.85011 | opp_overlap 1163138 CAGTAATATGAAAAA CCGTTGCAAAC AGTT GTTTACAACGG TTTTTTTCATTTTTA TERM 1401 1163163 - 1163138 - T 100 -12.7 -4.89233 | opp_overlap 1163138 CAGTAATATGAAAAA CCGTTGCAAAC AGTT GTTTACAACGG TTTTTTTCATTTTTA Pnap_1095 1164205 - 1163231 - | zinc finger, SWIM-type TERM 1402 1163304 - 1163318 + g 91 -4.9 -5.24531 | overlap 1163294 GGTTTCGGCGTTGCC GGTGG GCTTG CCGCC TTTTTTGTAGCAGGT TERM 1403 1163394 - 1163404 + g 81 -2.4 -5.1675 | overlap 1163384 TTGACCGCCATCTTG CCGG ATG CCGA TTTTTTGCTGGCTGG TERM 1404 1164093 - 1164121 + g 81 -4.4 -5.09426 | opp_overlap 1164093 1164094, overlap 1164100 1164101 ATGGCGCCTCGAAAA GCCGTGATCGGC GTCAG GACGATGCCGGC TTTTTTCGCCTTGGC TERM 1405 1164104 - 1164093 - G 70 -7.2 -4.07687 | opp_overlap 1164093 1164100 1164101, overlap 1164094 ATGGCGCCTCGAAAA GCCG TGAT CGGC GTCAGGACGATGCCG Pnap_1096 1166924 - 1164225 - | SNF2-related protein TERM 1406 1165839 - 1165892 + g 70 -11.6 -3.15324 | opp_overlap 1165831, overlap 1165832 1165883 GGCAAAGGGCAGGCC GTTTTCGGCCGCTTGCTCGATGGC CTTGAA GCGCTCCAGCAGGCGGCCGATGGC CTTTTGATCGACCTC TERM 1407 1165883 - 1165893 + g 79 -8.2 -4.26076 | overlap 1165839 AGCGCTCCAGCAGGC GGCC GAT GGCC TTTTGATCGACCTCG Pnap_1097 1167424 - 1167002 - | Ion transport 2 domain-containing protein Pnap_1098 1167496 - 1168161 + | hypothetical protein Pnap_1099 1169107 - 1168175 - | hypothetical protein Pnap_1100 1169649 - 1169125 - | methylated-DNA--protein-cysteine methyltransferase Pnap_1101 1171304 - 1169769 - | Ada metal-binding domain-containing protein TERM 1408 1169867 - 1169904 + g 83 -7.5 -4.57569 | overlap 1169883 AGCTGCGCCACGGTT TCCAGCCGGCGGAGGCG CGTT CGGCTTCGCGCGCCGGA TTTTTCAGCGCCTGC TERM 1409 1171123 - 1171098 - G 70 -13.3 -2.89564 | opp_overlap 1171098, overlap 1171107 1171108 TCGGCAGCGCAGACA GGGCCGAAAGC CGGC GCTTTCGGCCT GCGCCGCATGGCGGA Pnap_1102 1172893 - 1171388 - | 4-alpha-glucanotransferase Pnap_1103 1174991 - 1172904 - | glycogen debranching enzyme GlgX TERM 1410 1173929 - 1173900 - G 100 -9.9 -5.0133 | gap 1, overlap 1173902 CACGGCGGTAAAAAA GGCGCCGCCCGGCT CGA AGCCGTG-GTCGCC CCGGCCCAGCACCGG Pnap_1104 1177177 - 1174988 - | 1,4-alpha-glucan branching enzyme TERM 1411 1175263 - 1175229 - G 84 -4.3 -5.14626 | overlap 1175230 1175231 ACCACCAAAATAAAA CTC-CGTGCATCCAGGC CGC GCC-GGATGAAGGCGAG CACCGAATGCGCGGC TERM 1412 1176205 - 1176152 - G 74 -12.3 -3.53012 | gap 1 CGCGTCGGTCGGAAA GTGCGCCGGCACCCAGTCGAGCAGCA CGC CGATGCCCGAC-GCGTGGCAGCGCGC GATGAAACGCACCAG Pnap_1105 1179639 - 1177213 - | glycogen/starch/alpha-glucan phosphorylases TERM 1413 1180504 - 1180487 - g 78 -9.8 -4.09739 | opp_overlap 1180499, overlap 1180488 CGAATTCCTCGAAAA GCCGGC CGACCC GCCGGC CATGCCGGGCCGCGA Pnap_1106 1179915 - 1181183 + | glucose-1-phosphate adenylyltransferase Pnap_1107 1181180 - 1182664 + | glycogen/starch synthases, ADP-glucose type TERM 1414 1183490 - 1183462 - g 84 -15.4 -3.33737 | overlap 1183480 CAGCAAGCCCGAGAA CCTGCAGGATCT GATCA AGACCCTGCAGG CCAGCGACGCCGAAC Pnap_1108 1182815 - 1184197 + | phosphomannomutase Pnap_1109 1184262 - 1185386 + | lipopolysaccharide heptosyltransferase I TERM 1415 1186415 - 1186438 + G 70 -10.2 -3.54424 | TACTACGGTTTGAGC GATGTCGCCC TGCT GGGCGGCAGC TTTGCGCCGCTGGGC Pnap_1110 1185383 - 1186720 + | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein TERM 1416 1187143 - 1187132 - g 81 -4.4 -5.04385 | GACACCGGGAAAAAA TTCG AGAG CGAA TGGGTCCATGTATTC TERM 1417 1187181 - 1187194 + G 72 -3.7 -4.56597 | opp_overlap 1187172, overlap 1187182 AAAACGGCAAGGTCA CCCGC TGGC GCGGA TTTTTCAACACGGCC Pnap_1111 1186841 - 1187227 + | hypothetical protein TERM 1418 1188581 - 1188567 - g 78 -7 -4.56597 | overlap 1188568 GCGTCGCTTGAAAAA CGCGCC GCC GGGGCG GGGATGACGGTGGCG Pnap_1113 1187958 - 1188752 + | short-chain dehydrogenase/reductase SDR TERM 1419 1188942 - 1188972 + G 82 -11 -4.09685 | CGCGTCCAGCGGGCG GGGCTGCGGGCTGG CGG CCAGCGCGTGGGCC TTTTGAAGAATGAAG Pnap_1114 1188900 - 1189157 + | hypothetical protein Pnap_1115 1189234 - 1189602 + | hypothetical protein Pnap_1116 1190321 - 1189617 - | short-chain dehydrogenase/reductase SDR TERM 1420 1189733 - 1189752 + g 84 -11.4 -4.10657 | gap 1, opp_overlap 1189691 AGTGCAGCGGGTCCG CCGC-CGGC ATG GCCGCGCGG TTTTCGGGGGTGTCG TERM 1421 1189959 - 1189989 + g 72 -11.8 -3.2794 | overlap 1189958 1189960 CATGTGCGGCACCAC GGCCCGCGCCGT GTTCAGG ACGGTGCGGGCG TTGATGTCCATCAGG TERM 1422 1189960 - 1189988 + g 77 -15.3 -2.5655 | overlap 1189958 1189959 ATGTGCGGCACCACG GCCCGCGCCGT GTTCAGG ACGGTGCGGGC GTTGATGTCCATCAG TERM 1423 1190174 - 1190162 - G 71 -6.2 -4.25104 | opp_overlap 1190109 CGGTGGCCAGGAAAA GGCG CTTGT CGCC CGCGTCGCCAAAGGC TERM 1424 1190269 - 1190250 - G 71 -11.4 -3.53012 | gap 1, overlap 1190251 GCCCTGGCTGGCAAA GGC-GGCGG CCA CCGCCTGCC CGAGGTTGCCGGCCG phhA 1191217 - 1190318 - | phenylalanine 4-monooxygenase TERM 1425 1190933 - 1190903 - G 72 -3.8 -4.57073 | CAGGTGCTCGAAAAA CACCTCGTCGGG CACCAGC CCCGGCACGGCG ACCACCTGCCAGCCG Pnap_1118 1192516 - 1191242 - | fumarylacetoacetase TERM 1426 1191793 - 1191779 - G 74 -2.7 -4.82901 | overlap 1191780 GTTCTTCGACAAAAA CGGCC CGAGC GGCTG GTATTCCCAGGCCTG Pnap_1119 1193052 - 1192513 - | glyoxalase/bleomycin resistance protein/dioxygenase Pnap_1120 1194131 - 1193049 - | 4-hydroxyphenylpyruvate dioxygenase TERM 1427 1193727 - 1193709 - G 74 -6 -4.46976 | ATCAAGAAACACAAA GTCGATGT CGT AGATCGAC TTGCCGTCCTCGAAG TERM 1428 1193912 - 1193938 + g 71 -5.8 -4.27584 | gap 1, overlap 1193909 AGGCGCTCGGGCCGT GC-TCGGCGGC AAAGTA GCCGGCGACGC TTTTGGGTTCGCGGT Pnap_1121 1195152 - 1194160 - | hypothetical protein Pnap_1122 1196363 - 1195203 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 1429 1195771 - 1195754 - G 71 -5.5 -4.25104 | opp_overlap 1195769 GGGCGCTCAGGAAAA CGCAGTT CTCG AACAGCG CGCTCTGGATTTCCT TERM 1430 1195949 - 1195959 + g 79 -8.2 -4.25104 | GAACCACCTCGTCGA GCGC CAG GCGC TTTTCATAGGGGCCG TERM 1431 1196205 - 1196187 - G 72 -4.5 -4.58283 | gap 1, opp_overlap 1196190 GAAGCTGCGGAAAAA GCCGATGC CCAG GC-CCGGC AGGCTGCGCGTCTTG TERM 1432 1196337 - 1196355 + g 73 -3 -4.77759 | overlap 1196340 AACGCCTTCCAGGGG CAGTCCGG TAG CTGGGGTG TTTTTCATGGCTTGT Pnap_1123 1197372 - 1196398 - | pyruvate carboxyltransferase Pnap_1124 1197525 - 1198445 + | LysR family transcriptional regulator TERM 1433 1199108 - 1199089 - g 83 -7.8 -4.62783 | overlap 1199090 GAGCCACCCGAAAAA CGACCCGG CCTA CCAGGTCA AGATCTCGATGCCAA Pnap_1125 1198616 - 1199128 + | hypothetical protein TERM 1434 1199190 - 1199209 + T 100 -12.1 -4.93696 | opp_overlap 1199186 1199189, overlap 1199181 TTCGTGCACAAGGAG GCCGGGG CCAAGC CCCCGGC TTTTTCCTGTTTGGA Pnap_1126 1200600 - 1199248 - | TolC family type I secretion outer membrane protein TERM 1435 1199344 - 1199365 + g 72 -12.3 -3.25823 | gap 1 CAGCAGTACGTTGTA GCGCG-CCTG CGC CAGGTCGCGC TTGGTCTGGAACAGC TERM 1436 1199764 - 1199775 + g 100 -7.2 -5.37593 | overlap 1199748 CAGTGTCGGCTTGTG GCCG GCTT CGGC TTTTTTGATTTCCAG Pnap_1127 1201025 - 1200660 - | rhodanese domain-containing protein Pnap_1128 1201743 - 1201054 - | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 1437 1201475 - 1201491 + g 75 -3.6 -4.86773 | ATGAAACCGGAGCCG GTGCCG ATTTC CAGCAC TTTTTCATGCTTTTG Pnap_1129 1202578 - 1201883 - | TetR family transcriptional regulator TERM 1438 1202417 - 1202396 - G 100 -10.1 -5.04325 | overlap 1202390 1202387 GGGAAAGTACAAAAA CAGCGTGCC CTTG GACACGCCG GCGCGCGCCGCGACT Pnap_1130 1204002 - 1202668 - | glucarate dehydratase TERM 1439 1203204 - 1203244 + g 75 -3.8 -4.8048 | gap 1, opp_overlap 1203202, overlap 1203191 1203223 CGCGGCCCGAGAAGC CGTCTTCGGCGCCGCACGG GTCT TCG-GCGTAGGCGACGACG TTTTTCATGTCCCGC TERM 1440 1203737 - 1203697 - G 70 -7.3 -4.05788 | overlap 1203698 GGTGCGCAAATCAAA CGTCTGCAGGCCGCGCCCG CCG CTGTCGCGGTCGGCAAACT GCTGGTGCATCTGCT TERM 1441 1203916 - 1203904 - G 74 -4.7 -4.56597 | GTTGCGCGTGAAAAA CGGGC CGT GCGCG CCGCTCAGGTTGAGC Pnap_1131 1205178 - 1204180 - | regulatory protein, LacI TERM 1442 1204520 - 1204479 - G 72 -12.1 -3.35996 | gap 1 GATGCGCAGCCAGAA CGGCGGCCAGCC-CGGCGCG GCC CGAGCCGAGGGTGGTCGGCG CTGGCACCAGGTGCG Pnap_1132 1206043 - 1205264 - | hypothetical protein Pnap_1133 1207301 - 1206105 - | acyl-CoA dehydrogenase domain-containing protein TERM 1443 1206359 - 1206408 + g 100 -14.2 -4.22214 | TCAGCCGGCCGACGC GCAGGCAGGCTTGCAGGCCGAG CGTGAT TTCGGTCTGCATGTCGGCCAGC TTCTTTTGAATCAGT TERM 1444 1207283 - 1207272 - G 85 -3.6 -5.36441 | CTCGGACAGAAAAAA CGGG TCTT CCCA GTTGAATTTGGTTTT Pnap_1134 1207438 - 1208322 + | LysR family transcriptional regulator Pnap_1135 1208362 - 1208901 + | peptide methionine sulfoxide reductase Pnap_1136 1209989 - 1208931 - | transposase, IS4 family protein TERM 1445 1209536 - 1209549 + g 75 -3.7 -4.77157 | ACGTCTCGATCATCT CGCGC ATCA GCTCG TTTTTCGTCACTTCG Pnap_1137 1210284 - 1210027 - | hypothetical protein Pnap_1138 1211672 - 1210656 - | transposase IS116/IS110/IS902 family protein TERM 1446 1211772 - 1211787 + r 86 -10.4 -4.18044 | overlap 1211774 GGTCGCAACTCGCTC GGGACG GGGA CGTCCC TTTCATTCTTTATGG Pnap_1139 1212032 - 1211790 - | hypothetical protein Pnap_1140 1213084 - 1212035 - | putative ATP-binding protein TERM 1447 1213213 - 1213225 + r 71 -4.7 -4.65916 | overlap 1213214 ACCTGTCGGTGTGGC GCGCG TAT CGCGG TTTTGTTGCCGTGGA Pnap_1141 1213767 - 1213315 - | signal-transduction protein TERM 1448 1213615 - 1213631 + g 85 -5.7 -5.00884 | overlap 1213617 GTCGCGGTCGGTGAC GATGCCC AGC GGGCGGC TTTTTTCCAGCGCAT TERM 1449 1213692 - 1213709 + g 70 -10.5 -3.66178 | TTCGCATCAGCTGGG CCGCCGC CAGC GCGGTGG TTTCGGGTTCGGCGA Pnap_1142 1214826 - 1213903 - | periplasmic solute binding protein TERM 1450 1214527 - 1214545 + g 70 -8 -4.07568 | GGTTTCGCCCTTGTA GCCGGCGG ACT TCGCCAGC TTTTGCGCCCACGGC TERM 1451 1214899 - 1214866 - R 90 -5.1 -5.25735 | gap 1, overlap 1214867 GTAAAAAACGAAAAA GCGGGACGCGTTCAGG CGA CCCGGT-GCGTCCGGC TCAGCACGCGCGGCA Pnap_1143 1215761 - 1214877 - | ABC-3 protein TERM 1452 1214965 - 1214954 - G 70 -7.2 -4.08485 | overlap 1214955 GCGACGCAAAGTAAA GCGC CCCC GCGC AGCCGATGATGGTCG TERM 1453 1215204 - 1215189 - G 81 -6.8 -4.78107 | CACCAGCATCAAAAA GCCCTG CTGC CAGAGC CAGCCGCGCCGCCCG TERM 1454 1215664 - 1215641 - G 100 -11.7 -5.42259 | overlap 1215616 1215643 GCAGCGTCAAAAAAA CGCCCAGCG GCGCGG CGCTGAGCG ACAGCGCCAGCGTGG TERM 1455 1215742 - 1215726 - G 72 -7.9 -4.14392 | GGCGAACGGGGAAAA GGCCGCG TCC CACAGCC AGGCGGCGAAGGCCA Pnap_1144 1216528 - 1215758 - | ABC transporter related Pnap_1145 1216802 - 1217308 + | ferric uptake regulator family protein TERM 1456 1217553 - 1217564 + G 78 -3.6 -5.00616 | GGATGCCTGGCGCGC CCGG ACCA TCGG TTTTTTGCCGCAAAA TERM 1457 1217907 - 1217919 + G 100 -4.7 -5.40474 | overlap 1217876 1217875 TGCGACGCACGATGC CCGCG TGG CCCGG TTTTTTTCCGAAAAT Pnap_1146 1217305 - 1217985 + | ABC transporter related Pnap_1147 1217982 - 1219184 + | hypothetical protein Pnap_1148 1219203 - 1219469 + | hypothetical protein TERM 1458 1219822 - 1219809 - g 90 -2.3 -5.43866 | opp_overlap 1219809 CAAGGCTGAAAAAAA CAGGA TCAT TCCGG TGTTCAGCCTCAAGC TERM 1459 1219883 - 1219913 + G 81 -7.5 -4.52047 | gap 1, opp_overlap 1219860 1219859 TCCAGGGTTTCATGA TGCCGCTGGAGCCG GGCG CGACGC-AGCGGCA TTTTCTGCTCTCGTC Pnap_1149 1219519 - 1220109 + | hypothetical protein Pnap_1150 1220324 - 1220695 + | hypothetical protein TERM 1460 1220716 - 1220701 - f 72 -11.8 -2.56914 | overlap 1220697 GAGTGCATGAATGTA GCCCCC CGAG GGGGGC TGAACTGCGCTTGGG TERM 1461 1220735 - 1220771 + F 71 -7.8 -3.98842 | gap 1, overlap 1220740 ACTGCGCTTGGGGCG GCCCGGCGCTGCGGCCG CTGG CGTCCGC-GCGCTTGCC TTTGTGGCTGTTCTG TERM 1462 1220740 - 1220766 + F 75 -11.5 -3.33711 | gap 1, overlap 1220735 GCTTGGGGCGGCCCG GCGCTGCGGCCG CTGG CGTCCGC-GCGC TTGCCTTTGTGGCTG TERM 1463 1220905 - 1220921 + G 81 -3.7 -5.04987 | CTGTTCAGCAAGTTG TTGCC GCGCGAA GGCAA TTTTTTCGAGATGTT TERM 1464 1221056 - 1221015 - g 76 -8.6 -4.11692 | overlap 1221002 CAGCGATCTGCAAAA GCGCAGCCTGCATCACCG GCAAGT CGATGACGCCGAGCGCGC CGCCGACCGCGTCAC Pnap_1151 1220887 - 1221534 + | hypothetical protein Pnap_1152 1221567 - 1222577 + | phosphate transporter Pnap_1153 1225231 - 1222658 - | hypothetical protein Pnap_1154 1225899 - 1225252 - | ABC transporter related Pnap_1155 1226891 - 1225896 - | tRNA delta(2)-isopentenylpyrophosphate transferase Pnap_1156 1227821 - 1226937 - | hypothetical protein Pnap_1157 1229825 - 1227891 - | DNA mismatch repair protein MutL TERM 1465 1228463 - 1228495 + g 76 -13.3 -3.53012 | overlap 1228442 1228463 GGGCGAGGGCGCGGC CCAGCGGCCAGTCGC CCT GGGGCAGGCTGCTGG TTTCAGGCGGCGCGC TERM 1466 1229563 - 1229597 + g 85 -15 -3.61517 | TGCAGCGACGCGATC TTGCTGGTGGCGTGGC GGC GTAGCGCCACCGGCAA TTCTTCGCGCGGAAT Pnap_1158 1230823 - 1229927 - | putative signal peptide Pnap_1159 1232059 - 1230875 - | beta-ketothiolase Pnap_1160 1233364 - 1232102 - | cobalamin synthesis protein, P47K Pnap_1161 1234257 - 1233379 - | hypothetical protein Pnap_1162 1236530 - 1234254 - | hydantoinase B/oxoprolinase TERM 1467 1236377 - 1236408 + g 81 -10.2 -4.22652 | gap 1 TGTGGATGCAGGCGT CCTCGACATCGGTGC GCG GCAT-GATGTCGTGG TTTTGCATGATCTCC Pnap_1163 1238710 - 1236575 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 1468 1237394 - 1237384 - G 73 -8.2 -4.08216 | opp_overlap 1237383 1237381 1237384 GCAGTTCGGTGAAAA GGCC GTT GGCC ATGTTGTCGTCCACC TERM 1469 1237939 - 1237963 + g 72 -2.2 -4.72986 | gap 2 GCTGCGCCATGCCGC CCGA-GTT-GTG AAC CACCAGCATCGG TTTTTCATAGCGGTG Pnap_1164 1239142 - 1238741 - | acetone carboxylase gamma subunit-like protein Pnap_1165 1241085 - 1239148 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 1470 1240466 - 1240445 - G 100 -7.3 -5.4505 | overlap 1240447 GCGTTGAACAAAAAA TGCTCCATC GCGG GATGGAGAA AGGAGTTGATCAGCG TERM 1471 1241400 - 1241382 - R 84 -13.2 -3.03124 | overlap 1241384 GGCGACTCCTGAAGA CATGCTGC GAC GCAGCATG AATGCCCGGCTTGCC Pnap_1166 1243779 - 1241752 - | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 1472 1243767 - 1243778 + g 74 -2.2 -4.85918 | ACATTTGCTTTGAGA TGCT GATT GGCA TTTTGTTGTCTCCTA TERM 1473 1244312 - 1244330 + G 86 -8.8 -4.56775 | overlap 1244303 TATTTTTGTCGAGAC CGGCGTGG TTG TCATGCCG TTTTTGCCCGGCGAT TERM 1474 1244575 - 1244591 + G 76 -5.7 -4.58685 | overlap 1244556 1244572 GCGTGACCATCATCG CGGCGCG CTT CATGCCG TTTTTGCGCACCTTT TERM 1475 1244718 - 1244728 + G 73 -6.8 -4.36914 | overlap 1244713 GTCGGCTATGCGTTC GGCA ACG TGCC TTTTGTCAAGGCGAA Pnap_1167 1244190 - 1244849 + | DedA protein (DSG-1 protein) TERM 1476 1245936 - 1245984 + G 71 -12.9 -3.01422 | overlap 1245953 GTTCGGCGGGCGGGT GCGCGTGGCCGTGAGCGGCGGCG CGC CGCTGTCGCATGCGGTGGCACGC TGCTTTCTGGGGCTG TERM 1477 1245953 - 1245987 + G 79 -11.3 -3.87815 | overlap 1245936 GCGTGGCCGTGAGCG GCGGCGCGCCGCTGT CGCAT GCGGTGGCACGCTGC TTTCTGGGGCTGGGC Pnap_1168 1244869 - 1246719 + | AMP-dependent synthetase and ligase TERM 1478 1246807 - 1246780 - T 100 -13.6 -5.22039 | gap 1, opp_overlap 1246780 TTGAAAGGCAAAAAA GACGACTC-CTGA ATT TCAGCGAGTCGTC TTTTTTTGCGTATCA TERM 1479 1246780 - 1246807 + T 100 -13.6 -5.50499 | gap 1, opp_overlap 1246780 TTGAAAGGCAAAAAA GACGACTC-CTGA ATT TCAGCGAGTCGTC TTTTTTTGCGTATCA Pnap_1169 1247132 - 1246875 - | 17 kDa surface antigen TERM 1480 1247235 - 1247289 + r 73 -5.5 -4.57569 | gap 1, opp_overlap 1247239, overlap 1247236 1247239 CGTATTGTTGCGAAT GCAACCGGGTGCAGGCAACC-CGCTC TACA GGGCGCGGTTGCGTGCCAGCGGTGGG TTTTTGGCGAAGTAG Pnap_1170 1248818 - 1247259 - | N-acetylmuramoyl-L-alanine amidase TERM 1481 1247718 - 1247766 + g 73 -8.1 -4.07568 | gap 1, opp_overlap 1247718 1247719 TGTCTCGGTAAAGAA GGCGT-CGGCATGCAGGCTGAT GAACAA GTCGGCCTTCACGCTGCGCGCC TTTTGCACCCGCACA TERM 1482 1248115 - 1248086 - G 75 -14.3 -2.75712 | gap 1, opp_overlap 1248074, overlap 1248083 CCACCGATGCAACCA CCGG-CGGCCGG GGAATGA CCGGCCGGCCGG CGTTGGCGGCGATGC Pnap_1171 1249333 - 1248815 - | hypothetical protein TERM 1483 1249717 - 1249697 - g 78 -6.8 -4.56597 | GCGCGGCTGCAAAAA CTCGCTGA ACGGA TCGGCGAG CATGTCGGCCCGTTC Pnap_1172 1249400 - 1250398 + | putative iron-sulfur cluster binding protein Pnap_1173 1251499 - 1250507 - | auxin efflux carrier TERM 1484 1251124 - 1251105 - G 73 -7 -4.2803 | GAGTTGAAGCGAAAA GCCACCTG GGCA CTGGCGGC ATGCTCGCGAAGGTC TERM 1485 1251316 - 1251296 - G 77 -2.5 -5.07486 | overlap 1251304 CACCGGGAATAAAAA GTAGTAAAC CAG GCTTTCCAC CTGGCTCCAGACCGA Pnap_1174 1251588 - 1252490 + | tyrosine recombinase XerD Pnap_1175 1253786 - 1252521 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 1486 1252782 - 1252806 + g 72 -7.7 -4.2349 | GGACCAGTCCCACAG CGTGCGCCCGT AGT GCGGCCGCAGG TTTTCGGTATCGACC TERM 1487 1253839 - 1253813 - R 70 -6.5 -4.07568 | gap 1 TTCGGTGTTGGAAAA GTCTAGCGCGCC TGAA GACGCGCT-GCC ATCACCTGTTTTGCG TERM 1488 1253881 - 1253863 - R 71 -4.4 -4.63218 | overlap 1253864 TTTTGCGCAACAAAA TGCACGCG CAG CCCGTGCC CTGTCGAAAGGAGTC Pnap_1176 1254227 - 1253895 - | hypothetical protein Pnap_1177 1255297 - 1254395 - | hypothetical protein TERM 1489 1255140 - 1255099 - G 85 -10.4 -4.2679 | opp_overlap 1255101 1255104, overlap 1255087 1255101 1255104 TAACTGCTATGAAAA TAGTAGCTGCTTGCGCA-TA CAGG TATTGCGCAAGCAGC-ACTT TTTGTTGTGAATCAG TERM 1490 1255138 - 1255101 - G 81 -13 -3.7331 | opp_overlap 1255101 1255104, overlap 1255087 1255099 1255104 ACTGCTATGAAAATA GTAGCTGCTTGCGCA-TA CAGG TATTGCGCAAGCAGC-AC TTTTTGTTGTGAATC TERM 1491 1255101 - 1255138 + g 100 -13 -5.20333 | opp_overlap 1255087 1255101 1255099 1255104, overlap 1255104 ACTGCTATGAAAATA GTAGCTGCTTGCGCA-TA CAGG TATTGCGCAAGCAGC-AC TTTTTGTTGTGAATC TERM 1492 1255136 - 1255104 - G 79 -15.8 -2.96321 | gap 1, opp_overlap 1255104 1255101, overlap 1255101 1255099 GCTATGAAAATAGTA GCTGCTTGCGCA-TA CAGG TATTGCGCAAGCAGC ACTTTTTGTTGTGAA TERM 1493 1255104 - 1255136 + g 78 -15.8 -2.81584 | gap 1, opp_overlap 1255101 1255099 1255104, overlap 1255101 GCTATGAAAATAGTA GCTGCTTGCGCA-TA CAGG TATTGCGCAAGCAGC ACTTTTTGTTGTGAA TERM 1494 1255266 - 1255256 - G 71 -8.2 -3.85698 | opp_overlap 1255262 GCCGCCGGCCAGAAA CCCG GCC CGGG CGCTTGCCGCTGCGG TERM 1495 1255272 - 1255282 + g 71 -8.2 -3.91911 | overlap 1255262 1255279 CCGGCCCGGGCGCTT GCCG CTG CGGC TTTCCTTACAATCAA Pnap_1178 1255333 - 1255857 + | hexapaptide repeat-containing transferase Pnap_1179 1256017 - 1256985 + | Hsp33 protein TERM 1496 1257038 - 1257006 - T 100 -17.2 -3.20348 | gap 1, opp_overlap 1257006 1257008, overlap 1256987 1257013 TCGATTAATAGCCAA GC-GAAAAGGCTGCC GCGT GGCAGCCTTTTCTGC TTTTTTAATACAGCG TERM 1497 1257006 - 1257038 + T 100 -17.2 -5.14563 | gap 1, opp_overlap 1256987 1257006 1257013, overlap 1257008 TCGATTAATAGCCAA GC-GAAAAGGCTGCC GCGT GGCAGCCTTTTCTGC TTTTTTAATACAGCG TERM 1498 1257008 - 1257035 + T 100 -18.6 -3.41701 | opp_overlap 1257006 1257013, overlap 1257006 GATTAATAGCCAAGC GAAAAGGCTGCC GCGT GGCAGCCTTTTC TGCTTTTTTAATACA TERM 1499 1257030 - 1257013 - T 100 -12.7 -4.29176 | opp_overlap 1257008 1257006, overlap 1257006 ATAGCCAAGCGAAAA GGCTGCC GCGT GGCAGCC TTTTCTGCTTTTTTA Pnap_1180 1258452 - 1257043 - | hypothetical protein TERM 1500 1257323 - 1257336 + g 86 -8.1 -4.56597 | opp_overlap 1257332 GTGTAGTCAAAATCT TCGGC GAAA GCCGA TTTTTCGCGCAGGAA TERM 1501 1257381 - 1257355 - G 80 -5.7 -4.72272 | opp_overlap 1257358 TTCGCGCAGGAAAAA GGCCTTGCCCG ACATG CTGGCATAGCC CGCCAGCGGGTCGGC Pnap_1181 1259140 - 1258583 - | hypothetical protein TERM 1502 1258712 - 1258727 + g 80 -5.4 -4.87626 | gap 1 GCATTTGTCGCACAT CCAGACC CAA GG-CTGG TTTTTGGTGTTGCCC Pnap_1182 1259434 - 1259192 - | septum formation initiator TERM 1503 1259239 - 1259251 + g 73 -3.3 -4.7254 | overlap 1259235 GCTTGACCATGCCGA GTTCG CTG CGGGC TTTTTCCTCGACCAT eno 1260772 - 1259486 - | phosphopyruvate hydratase Pnap_1184 1261767 - 1260910 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1504 1261743 - 1261729 - G 76 -11.4 -3.77722 | GGCAATCAGGAAGAA GGGCTG GTC CAGCCC GATGTCAAATCCGCA Pnap_1185 1263464 - 1261764 - | CTP synthetase TERM 1505 1261795 - 1261805 + g 93 -8.2 -5.05782 | ACTTTCAGGGGTTTT GCCG TCT CGGC TTTTTTCGCCTGGCT TERM 1506 1263308 - 1263290 - G 77 -4.4 -4.82901 | overlap 1263292 CGTCGGTGACAAAAA CCTCGCCA TGC TGGAGCGG CGACATTGTGCCCGG Pnap_1186 1263653 - 1264933 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 1507 1265044 - 1265025 - f 71 -5.8 -4.25104 | TGGCGCGCAGGAAAA CTTCTTTG ATCC CAAAAAAG CCGTGCCGGCCGATG TERM 1508 1265054 - 1265044 - f 95 -8.2 -5.0538 | overlap 1265046 TTTGATCCCAAAAAA GCCG TGC CGGC CGATGCACCGCTGGC TERM 1509 1265178 - 1265205 + F 100 -9.8 -5.1963 | gap 1 GATTGCCACGCAGGC GCTGGC-CCGGTT CGT ACCCGGCGCCGGC TTTTTGTTCATTCCC Pnap_1188 1265364 - 1265810 + | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut TERM 1510 1265815 - 1265846 + F 73 -10.8 -3.40522 | gap 1, opp_overlap 1265805 1265815, overlap 1265834 GGAAAGGCTGAAGCA GCCTGGGGCC-GGCG GCC CGTCTGGCGTCAGGC TTGTCCTACGCCGAT Pnap_1189 1266020 - 1266580 + | 17 kDa surface antigen TERM 1511 1266603 - 1266631 + T 100 -16 -4.72272 | opp_overlap 1266603, overlap 1266596 1266604 ATCCCTCACGCAAAA GCGGCGTTGCGG TTTTT CTGCAGCGCCGC TTTTTCATGGGCGGA TERM 1512 1266631 - 1266603 - T 88 -11.6 -4.18197 | opp_overlap 1266596 1266603 1266604 ATCCCTCACGCAAAA GCGGCGTTGCGG TTTTT CTGCAGCGCCGC TTTTTCATGGGCGGA Pnap_1190 1267183 - 1266659 - | putative fkbp-type peptidyl-prolyl cis-trans isomerase (rotamase) protein TERM 1513 1266728 - 1266707 - G 72 -4.3 -4.59773 | gap 1, overlap 1266708 CTGCAGCTTGAAAAA CCCGGTGCCC AGC GAGC-CCTGG CCGACTTCCTGTTCA TERM 1514 1266982 - 1266992 + g 76 -8.2 -4.11216 | GGTTTTCATCGTAGT CGCC GAA GGCG TTTTCGGGCTCCAGG TERM 1515 1267291 - 1267275 - g 91 -3.5 -5.42259 | opp_overlap 1267289, overlap 1267277 CCACTGGCAAAAAAA GCCGCTC CTG GTGCGCC AGGCCATTGCCGGCT TERM 1516 1267303 - 1267313 + G 73 -6.8 -4.37886 | overlap 1267289 CGCCAGGCCATTGCC GGCT TTG AGCC TTTTCTCAGCCGTGC Pnap_1191 1267198 - 1268439 + | cupin 4 family protein Pnap_1192 1268486 - 1269001 + | hypothetical protein TERM 1517 1269169 - 1269184 + F 74 -4.8 -4.70169 | overlap 1269178 GGGTTTGGGTTTTGA CAATTT CCGG AAATTG TTTTCTTAAATATCA TERM 1518 1269307 - 1269285 - g 72 -4 -4.61482 | opp_overlap 1269291 TGCGGTAAAAAAGAA GAAGCCGCTG CAC CTGCACCTTC AGTGGTCGTGGTTCC Pnap_1193 1269216 - 1269485 + | hypothetical protein TERM 1519 1269522 - 1269507 - T 91 -11.8 -4.08767 | opp_overlap 1269507 CCGACTTCCTGAAAA GCCGCC TCCG GGCGGC TTTTTTCATGGCTCG TERM 1520 1269507 - 1269522 + T 100 -11.8 -5.1675 | opp_overlap 1269507 CCGACTTCCTGAAAA GCCGCC TCCG GGCGGC TTTTTTCATGGCTCG Pnap_1194 1270336 - 1269563 - | beta-lactamase domain-containing protein Pnap_1195 1271537 - 1270377 - | NlpB/DapX family lipoprotein TERM 1521 1271139 - 1271127 - G 72 -2.6 -4.72272 | TTGCGTCAGCAAAAA GCCG CTTTC CAGC CAGAAGTCACGCACC Pnap_1196 1272519 - 1271554 - | dihydrodipicolinate synthase Pnap_1197 1273161 - 1272532 - | methyltransferase type 11 TERM 1522 1272759 - 1272739 - G 72 -2.4 -4.72272 | overlap 1272741 GGTGCGCAGCAAAAA GTCAGGCC GCGAA GGCTTGCC CACGGTTTCATTGCC TERM 1523 1272884 - 1272907 + g 84 -10.9 -4.2349 | opp_overlap 1272880 1272881 ACCGCCGCAAACTGC CGGCCCGCG AAGGGC CACGGGCCG TTTTCAATGTCGGCC Pnap_1198 1274597 - 1273356 - | major facilitator superfamily transporter TERM 1524 1275190 - 1275200 + G 78 -6.8 -4.56597 | opp_overlap 1275186 CGCGAAGGCAAGGTC GCCA GCC TGGC TTTTTCCGGCGGCGA TERM 1525 1276455 - 1276422 - g 70 -10.2 -3.61398 | overlap 1276453 GGCGCGCGGCAAGAA GCCGGCGTCCAAGG TCTATG CCCTGGACGAAGGC GAACTGACCGCCATC Pnap_1199 1274752 - 1276731 + | DNA topoisomerase IV subunit B TERM 1526 1276880 - 1276899 + G 78 -3.4 -5.0133 | overlap 1276872 CTTTTCATCGCTGCA GCTCGATG AGCG CTACGAGC TTTTTTCACGCGGTG TERM 1527 1277547 - 1277491 - g 79 -15.1 -2.94144 | gap 3, opp_overlap 1277492 1277492, overlap 1277488 1277518 TGCGCATGGAAATGA TGGGCGGCGCCAGCGGCC-GGGCCAACA TGCC TGC-GGCCCTGGCCGC-GTCGCCGTCCC TTGTATTGCCGGAGG TERM 1528 1277492 - 1277547 + G 91 -16.2 -3.65812 | opp_overlap 1277488 1277491 1277518, overlap 1277492 GCGCATGGAAATGAT GGG-CGGCGCCAGCGGCC-GGGCCAACA TGCC TGC-GGCCCTGGCCGC-GTCGCCGTCCC TTGTATTGCCGGAGG TERM 1529 1277492 - 1277546 + G 87 -18.6 -2.79273 | gap 3, opp_overlap 1277488 1277491 1277518, overlap 1277492 GCGCATGGAAATGAT GGGCGGCGCCAGCGGCC-GGGCCAACA TGCC TGC-GGCCCTGGCCGC-GTCGCCGTCC CTTGTATTGCCGGAG Pnap_1200 1276743 - 1277582 + | lytic transglycosylase, catalytic TERM 1530 1278963 - 1278929 - g 78 -5 -4.68994 | gap 1, overlap 1278930 ACGACGATTGAAAAA CGCTCGCAGCACC GGCTCGACAA GGTGCTG-GCGCG CATCCACATCCTCGA TERM 1531 1279182 - 1279164 - g 85 -10.2 -4.30416 | overlap 1279146 AGCAGGAACTGAAAA CCCTGCGC GAG GAGCAGGG CAGGCTCGAAGACAT Pnap_1201 1277729 - 1280083 + | DNA topoisomerase IV subunit A Pnap_1202 1282130 - 1280199 - | hypothetical protein TERM 1532 1280324 - 1280298 - G 78 -2.9 -5.00616 | gap 1, opp_overlap 1280276, overlap 1280299 1280300 GGCGGTTTCAAAAAA TGCGCGCCGCCT TTGC AGCCGGCCCG-A TCCGACGACGCTTTT Pnap_1203 1285076 - 1282137 - | peptidase C14, caspase catalytic subunit p20 TERM 1533 1285280 - 1285270 - R 90 -4.6 -5.37345 | overlap 1285271 GGGAAGGAGAAAAAA CCGG GCT CCAG CCGCGCCTTGACAAG TERM 1534 1285348 - 1285305 - R 86 -11.8 -3.90328 | GACAAGTCTTACAAA CTTCATGATTTGAAACGGCC GCCC GGCCGTTCCAAATCACAGGG CTGGCAAGCTTCACT Pnap_1204 1285829 - 1285359 - | endoribonuclease L-PSP TERM 1535 1287899 - 1287952 + G 70 -7.4 -4.07568 | gap 2, opp_overlap 1287942, overlap 1287866 1287893 1287898 ATCGGTCAGGGCAAT GCG-GTGCTGGT-TCGCACGGCGACG CATG CCTTGCTGTACGACACCGGCCCGCGC TTTTCGCGCGAAAGC Pnap_1205 1286099 - 1288636 + | DNA internalization-related competence protein ComEC/Rec2 Pnap_1206 1288689 - 1290245 + | hypothetical protein Pnap_1207 1290248 - 1291210 + | hypothetical protein TERM 1536 1291586 - 1291610 + G 80 -15 -3.14132 | gap 1 GGCCCAGCCGCATCC GCGCCTGGCCG AATT CGGCC-GGCGC TTCATCACCACGCAG TERM 1537 1291730 - 1291703 - g 77 -2.6 -5.09895 | overlap 1291712 CAGCTATCTAAAAAA TAGCACCAACGT GACC ACCACGGCGCTA CAGGCGTTCGAGGCC Pnap_1208 1291248 - 1292066 + | transglutaminase domain-containing protein Pnap_1209 1293928 - 1292126 - | alkaline phosphatase TERM 1538 1293139 - 1293161 + g 71 -9 -3.68359 | overlap 1293133 TGGCCTTGCGCGTGG CCCAGTCGCC TTG GGTGGCCGGG TTGTGGTTTTCAGCG TERM 1539 1293310 - 1293356 + g 84 -13.7 -3.69373 | overlap 1293311 1293313 1293347 1293349 AGTCGGCCAGGCTGG CGATGTCGCTGGC-CGGGGCCGC CAC GCGGCCCAGCGCCA-CGGCGTCC TTGTTGCCGTATTTG TERM 1540 1293311 - 1293355 + g 84 -17.2 -2.80901 | overlap 1293310 1293313 1293347 1293349 GTCGGCCAGGCTGGC GATGTCGCTGGC-CGGGGCCGC CAC GCGGCCCAGCGCCA-CGGCGTC CTTGTTGCCGTATTT TERM 1541 1293313 - 1293353 + g 74 -14 -2.94313 | overlap 1293311 1293310 1293347 1293349 CGGCCAGGCTGGCGA TGTCGCTGGC-CGGGGCCGC CAC GCGGCCCAGCGCCA-CGGCG TCCTTGTTGCCGTAT TERM 1542 1293877 - 1293888 + g 70 -7.2 -4.07687 | opp_overlap 1293864 1293877 AACTGCCCGCGACAA CGGC AGCT GCCG TTTTCAGCAAAAACT Pnap_1210 1295022 - 1294036 - | alcohol dehydrogenase TERM 1543 1294548 - 1294504 - G 70 -10.6 -3.61178 | gap 1 GGCATGCACTTCAAA GCCGAGGCGGGCGAGCAGCGC GATG GCGATGCT-GCCCACGCCGCC GTTCGCGCCCGTGAC TERM 1544 1294654 - 1294674 + g 79 -9.7 -4.13767 | overlap 1294659 CGTGCCGATGGCCAT GGCCTGG CGCGCAT CCAGGCC TTTTGGCATCGGCAC TERM 1545 1294659 - 1294714 + g 82 -11 -4.07568 | gap 1, overlap 1294654 CGATGGCCATGGCCT GGCGCGCATCCAGGCCTTTTGGCATCG GCA CCA-GCCAGTCGGCTTTGACGCGCGCC TTTTGCGCCAGGCCG TERM 1546 1295546 - 1295503 - g 74 -12.5 -3.28712 | gap 3 GCTGCGCTTTGACAA GCTGG-CC-GCTGGCGAGACGC GCC GCATCTCGCC-GCTGGACCTGC AGCCCGACCATGCCT TERM 1547 1295691 - 1295713 + G 76 -8.3 -4.18018 | overlap 1295685 GGGCCGGAACGCGCG CGCTGCCCG AGTTG CTGGCGGCG TTTTGCATGCCCAAC TERM 1548 1296059 - 1296081 + G 74 -4.7 -4.56775 | overlap 1296050 GGCCATGCCTGGGTC GGCGTCTGG CTGCA CCTGGCGTC TTTTTCGGACGCGCT TERM 1549 1298652 - 1298617 - g 73 -13.3 -3.14132 | gap 2 GCTGGTGTCGAGCAA CCGCGCGGCCCTGGCCG CCGG CGGCCAGG-CCG-GCCG CGCGCTGCTGGCCTA TERM 1550 1299200 - 1299181 - g 100 -4.8 -5.42259 | opp_overlap 1299192, overlap 1299183 1299184 CGAGCTGCAAAAAAA GAGCCGGC AGAT GCCGGTGC GCCAGTTGGTTCGCG TERM 1551 1299198 - 1299183 - g 71 -6 -4.35085 | opp_overlap 1299192, overlap 1299181 1299184 AGCTGCAAAAAAAGA GCCGGC AGAT GCCGGT GCGCCAGTTGGTTCG TERM 1552 1299869 - 1299825 - g 73 -11.4 -3.65199 | gap 2 AACTGCTGATTGAAA CGCTGGTCGATGCCCGGCGCCG CGC CAGC-CCGGAACTCGACC-GCG CCATCGCGGCGCGCG TERM 1553 1300224 - 1300168 - g 73 -12.9 -3.14564 | gap 1 GGAGTTCGCCATCAA GGGCTACCGCGCGC-TGGCCGAGCAG AGCCTG CCGACCGGCCAGGAGCCCGACAGCCC GTTCGAGGTCGCGGT TERM 1554 1300520 - 1300506 - g 100 -10 -5.1287 | GCGAGATTGAAAAAA TCAGCC AGC GGCTGA AGGCCATCGTGGTCA Pnap_1211 1295249 - 1301224 + | putative DNA helicase TERM 1555 1301412 - 1301386 - f 88 -9.6 -4.37886 | GGATGGTGCATAAAA TCAGACTAGTTT AGT AAACCAGTCTAA AAATTCATGCCAACC Pnap_1212 1301419 - 1301724 + | prevent-host-death family protein TERM 1556 1301802 - 1301817 + G 75 -3.2 -4.83169 | GCGTATTTGAAAAGC CAGGCT GCCG AGACTG TTTTTCTAAGCGCCT Pnap_1213 1301721 - 1302152 + | PilT domain-containing protein TERM 1557 1302553 - 1302536 - g 80 -4.9 -4.90266 | gap 1, overlap 1302537 TTCATCAATGAAAAA GGCGAATG GGC CATTC-CC GCCAAATTTGAAAAG TERM 1558 1302895 - 1302882 - g 72 -3.8 -4.66537 | CTGCCGAATATAAAA CTCC ATCACG GGAG GTGGCGCAGGGCGTG Pnap_1214 1302329 - 1303804 + | hypothetical protein Pnap_1215 1304485 - 1303784 - | hypothetical protein TERM 1559 1303863 - 1303874 + g 76 -5.8 -4.64591 | opp_overlap 1303851 1303850 1303862 1303863 AACGCCACCTCAAAG CGGT AGGC ACCG TTTTCTATGTGCTTG Pnap_1216 1305636 - 1304545 - | lytic murein transglycosylase B Pnap_1217 1307738 - 1305669 - | transglutaminase domain-containing protein TERM 1560 1306539 - 1306595 + g 74 -13.6 -2.87132 | gap 1 AGTGCGCAGCCGCTC CAGCGCGACCTGCACCAGGCCAGCGGT AGTG GCC-TTGGCATTGCGCGGGTCGCGCCG TATCTCGGCGGCCAG TERM 1561 1306854 - 1306829 - G 71 -6 -4.30576 | opp_overlap 1306834 1306837 CTTCCATCACGAAAA GCCAGGGCCG CTGGGT CGGCTCCAGC GTGACTTCGTAATGC Pnap_1218 1308799 - 1307732 - | hypothetical protein TERM 1562 1307980 - 1307999 + g 83 -7.8 -4.56597 | overlap 1307982 CGCTTTCCCCGCTGT GTTCGCCA GCCT TGGCGACC TTTTTCCAGAGCACG TERM 1563 1308789 - 1308767 - G 78 -4.7 -4.72272 | overlap 1308771 CGCGGCCATGAAAAA GCAGGCCTG CGGCT CAGGGCAGC GGCACGGCATCCAGC Pnap_1219 1309712 - 1308780 - | ATPase TERM 1564 1309019 - 1308993 - G 72 -4.3 -4.57073 | gap 1, opp_overlap 1309016, overlap 1308996 CAGGCCCTGCAAAAA CCAGCGGCC-CG AGCG CGTGGCGGCCAG CAGATCCTGCAGGTA TERM 1565 1309767 - 1309752 - g 72 -2.5 -4.71426 | overlap 1309753 TTGTTATGAACAAAA CGGGT TATTTC ACCCA CACGGACTGCTGGAA Pnap_1220 1309742 - 1310695 + | histone deacetylase superfamily protein Pnap_1221 1310706 - 1311527 + | enoyl-CoA hydratase/isomerase TERM 1566 1312011 - 1312067 + G 80 -14.4 -3.15841 | gap 2, overlap 1312005 1312053 AGTGGAAGGTCGGCG GCTCGATGCTGTCGGT--GCGCGCCCTG CTG CAGGGTGCGCTGACAGCCGGCGTCGTGC TGTTGATCACCTTGT Pnap_1222 1311524 - 1312879 + | MscS mechanosensitive ion channel TERM 1567 1312928 - 1312939 + F 93 -4.4 -5.5112 | opp_overlap 1312909 1312928 CGTTTATAATAAATA GAAC GACC GTTC TTTTTTATTCCTGCC Pnap_1223 1313073 - 1313822 + | electron transfer flavoprotein beta-subunit TERM 1568 1314372 - 1314349 - g 73 -11 -3.6682 | gap 1, opp_overlap 1314357 CGGCAGCGATTGAAA CGCTGGCCGGC GTG GCCGAC-AGCG GCAAGTCCTCGTTCC Pnap_1224 1313853 - 1314785 + | electron transfer flavoprotein, alpha subunit TERM 1569 1314803 - 1314820 + F 100 -8.4 -6.06529 | opp_overlap 1314802 1314803 CAAAAAGACAAGAAG GGCGTC GTGATG GACGCC TTTTTTTTATCTGTA TERM 1570 1315843 - 1315823 - g 73 -3.1 -4.72272 | overlap 1315824 1315825 CGCGCTTACCAAAAA GCCGTGGGC TTT GCCAAAGAC CGCGTACAGAGCCGC TERM 1571 1316179 - 1316148 - g 76 -11.5 -3.76224 | gap 1, opp_overlap 1316147 1316148 GTTTCATCGAGGAAA CCGGCGCGGCGCAG TATTT CCGCGACGC-CCGG ATTTTGACGATTTAC Pnap_1225 1314881 - 1316671 + | acyl-CoA dehydrogenase domain-containing protein TERM 1572 1316723 - 1316736 + F 72 -3.8 -4.74103 | CTGTGCATGCTAGCC GTGC GCAAAA GCAC TTTTTAACTTAAAAA Pnap_1226 1316769 - 1317725 + | 2-nitropropane dioxygenase, NPD TERM 1573 1318273 - 1318293 + G 73 -8.9 -4.09864 | TCGCTGTGCGACCAG CTCGGCCGC CTT GCCGTCGAG TTTTCCAAAGTCGAT Pnap_1227 1317952 - 1318644 + | hypothetical protein Pnap_1228 1320388 - 1318679 - | sulfatase TERM 1574 1319504 - 1319477 - G 81 -10.6 -4.24002 | gap 1, overlap 1319480 1319493 TCCGAAATTTGAAAA CATGCACGGCACC GAA GCTGCCGTGC-TG GTGCCGCACGACCAG TERM 1575 1319502 - 1319480 - G 72 -13.4 -2.8236 | overlap 1319477 1319493 GAAATTTGAAAACAT GCACGGCACC GAA GCTGCCGTGC TGGTGCCGCACGACC Pnap_1229 1321285 - 1320425 - | carboxylesterase TERM 1576 1321236 - 1321226 - G 73 -8.2 -4.07568 | overlap 1321227 CTCGTGCTGGTAAAA GCGC TGC GCGC CGCCAAAGCAGGCGT Pnap_1230 1322454 - 1321348 - | alcohol dehydrogenase Pnap_1231 1322985 - 1322569 - | RNA-binding S4 domain-containing protein Pnap_1232 1324425 - 1322986 - | integral membrane sensor signal transduction histidine kinase TERM 1577 1324070 - 1324037 - G 74 -4.7 -4.57837 | gap 3, overlap 1324041 ACATCGTCGTAAAAA TCCA--CCAGCGCCGC ATACG GCGGC-CTGGCCTGGA TGCGGCCGCGCCAGA Pnap_1233 1325114 - 1324422 - | two component transcriptional regulator TERM 1578 1325429 - 1325410 - g 76 -10.6 -3.8512 | GAGCTATGACAACAA GGGCGGCG CCGC CGGCGCCC TGGGCCTGGCGCAGT TERM 1579 1326086 - 1326070 - g 74 -2.1 -4.83169 | overlap 1326056 1326073 AGCGTCCGAGAAAAA CAACTGG ACG CCCGCCG TGCTGACCGGCCCGG Pnap_1234 1325213 - 1326172 + | hypothetical protein Pnap_1235 1326378 - 1326890 + | hypothetical protein TERM 1580 1327650 - 1327686 + G 79 -9.4 -4.21275 | gap 2 ACTGGCGCCGTTCCT GGCCTGCC--TGGCTGCG CGG CGCGGCCATTGGCGTGCC TTTTGGCTGCATTCC Pnap_1236 1326881 - 1328404 + | hypothetical protein TERM 1581 1329160 - 1329130 - g 77 -15.4 -2.56095 | opp_overlap 1329158, overlap 1329138 GCTACAGCGAATTCA GCGAGCAACTCGCC AGT GGCAAGCTGCGCGC CATCGGCGTGTCGTC Pnap_1237 1328445 - 1329458 + | hypothetical protein TERM 1582 1329784 - 1329767 - g 73 -8.3 -4.08767 | opp_overlap 1329767 1329772, overlap 1329768 GCGACCTTCGCAAAA GGCGCCG GCAT CGTCGCC GGCGGGCCGTTCTAC Pnap_1238 1329584 - 1331041 + | fibronectin, type III domain-containing protein Pnap_1239 1331208 - 1331666 + | hypothetical protein Pnap_1240 1331686 - 1332162 + | putative transposase of insertion sequence ISRm10-1 Pnap_1241 1332952 - 1332170 - | short-chain dehydrogenase/reductase SDR TERM 1583 1333040 - 1333022 - H 71 -10.2 -3.27022 | overlap 1333023 TTGACGCCATATTAA GCGCCAGC AGC GCTGGCGG GCAGGTCTGGGAAAA TERM 1584 1333039 - 1333023 - H 78 -13.7 -2.55999 | overlap 1333022 TGACGCCATATTAAG CGCCAGC AGC GCTGGCG GGCAGGTCTGGGAAA TERM 1585 1333123 - 1333109 - H 83 -10 -4.16016 | opp_overlap 1333120 TGAGTGCCCAATAAA GGTCCA CTA TGGACC CGTGCGAGTCTTTGC TERM 1586 1333869 - 1333859 - g 72 -2.4 -4.74103 | opp_overlap 1333853 1333852 1333859 CTGGGAACGCAAAAA GCCC GCT GGGG TTATTTGGTTCTGAC Pnap_1242 1333169 - 1334113 + | UbiA prenyltransferase Pnap_1243 1334640 - 1334134 - | hemerythrin-like metal-binding protein TERM 1587 1334344 - 1334317 - G 70 -9.8 -3.53811 | CGCATGCTGCGGAAA CCAGATGGCGAG TTCG CGGGCCATCTGG CGAATGGCGCCCAGG TERM 1588 1334775 - 1334747 - R 100 -21.8 -4.3208 | opp_overlap 1334774 GGCCACAACGCAAAA CGCCCGACAGCC ACAGA GGCTGTCGGGCG ATGCGTGGTGCGCGG Pnap_1244 1336552 - 1334837 - | DEAD/DEAH box helicase domain-containing protein TERM 1589 1336833 - 1336854 + H 83 -5.8 -4.89966 | GAAAACTGCATTGAT TTGCCGGC CGGCTC GCGGGCAA TTTATTTTTACCTGT TERM 1590 1336955 - 1336974 + G 86 -6.4 -5.00616 | CCCAAACGACAGATT CTCAAGGA CGTT TCCCTGAG TTTTTTCCCGGGCGC TERM 1591 1337774 - 1337725 - g 77 -13.6 -3.28791 | gap 1, overlap 1337752 ATGGTCGCGCCAGAA CCCCAAGGCGCGCCAGGCCAAGA GCAAG TCCCGGC-TGGCACGCTTCGAGG AACTGTCCGATTTCG TERM 1592 1338111 - 1338096 - g 85 -3.2 -5.37593 | opp_overlap 1338097, overlap 1338097 TGGCAAACGAAAAAA CCGTCT GGGA AGACGT TTCGGGCGGCCTGGA TERM 1593 1338221 - 1338208 - g 71 -5.9 -4.30576 | overlap 1338209 CGGCGACCAGCAAAA GCGCG TCGG CACGC TGTCGGGCGGCGAAC Pnap_1245 1336892 - 1338553 + | putative ABC transporter ATP-binding protein TERM 1594 1338626 - 1338615 - g 83 -7.2 -4.57073 | overlap 1338595 CACTGGCTTGAAAAA GCCG TGAT CGGC CTGAACCTGTGCCCG Pnap_1246 1338561 - 1339109 + | hypothetical protein TERM 1595 1339620 - 1339647 + G 72 -2.7 -4.77036 | gap 1, overlap 1339629 AGGGCTGGCCGGTTT TTCC-GCGCG CCTGAGTAC CGCGCAGGGA TTTTTGGTGGTCAAG TERM 1596 1340395 - 1340415 + G 74 -4.6 -4.56597 | CCGGCCTTTTTGCGC CTGGCGGT GACCG ACCCCCGG TTTTTCAGCGACAAA Pnap_1247 1339204 - 1341552 + | hypothetical protein Pnap_1248 1342833 - 1341556 - | amidohydrolase TERM 1597 1342061 - 1342077 + g 91 -3.5 -5.45652 | opp_overlap 1342062, overlap 1342062 ATCGTGACCGAGATG ACGCCGG TGT CCAGCGG TTTTTTATTCCGGCT TERM 1598 1342217 - 1342267 + g 74 -13.1 -3.35679 | gap 1, opp_overlap 1342244 1342245, overlap 1342218 TCGTTGCTGGAGGCC ATGACCGGACCGGCGCTGACGGCA AAAG TGCCGACCGCGCC-GCCCGGCCAG TTGTGCATGCCAAAA TERM 1599 1342218 - 1342266 + g 80 -16.6 -2.61264 | gap 1, opp_overlap 1342244 1342245, overlap 1342217 CGTTGCTGGAGGCCA TGACCGGACCGGCGCTGACGGCA AAAG TGCCGACCGCGCC-GCCCGGCCA GTTGTGCATGCCAAA TERM 1600 1342302 - 1342284 - G 72 -3.8 -4.62069 | opp_overlap 1342286, overlap 1342286 TGTGCATGCCAAAAA CAGCTTCC ATG GGAAACTT TTCAAACAGGCCGTC Pnap_1249 1345526 - 1342830 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 1601 1343007 - 1343031 + g 77 -12.7 -3.61398 | CAGCAGCAGGCTCAG CCCCAGGCCGC CCA GCAGCCAGGGG TTCTTCAGCACGCCC TERM 1602 1344024 - 1343970 - G 70 -7.7 -4.09685 | gap 1, opp_overlap 1344012, overlap 1344012 1344013 TGCCAGGGCGCAAAA GCCCGTGCCGGCGTCCAGCG-GGTCG TCGT CCACCACGGCAAATGCCAGCACGCGC AGCGCGCGACCGGCC TERM 1603 1344550 - 1344521 - G 71 -13.5 -2.62184 | TGTCGGTGCAGATCA CGGTGGTCGAGCC CAGC GTCTCGACCGCCG ACAGCCGGCGGATGA Pnap_1250 1346939 - 1345602 - | TRAP transporter solute receptor TAXI family protein TERM 1604 1345694 - 1345708 + g 85 -5.6 -5.00616 | opp_overlap 1345679 1345695 1345697, overlap 1345695 GCTCGCTGGCGTAAG ACAGCG GCA CGCTGA TTTTTTCGGCGCGGC TERM 1605 1346236 - 1346226 - G 71 -8.2 -3.86015 | overlap 1346227 GACCGGGCTCAGAAA GGCG AAG CGCC GCGAATAGGCTTCGC TERM 1606 1346571 - 1346561 - G 83 -4.6 -5.00616 | CCTTGCGGTAAAAAA GCCA CAC CGGC TCGACAAACAGGCTG TERM 1607 1346731 - 1346743 + g 83 -7.7 -4.66163 | ACGACCTCGATGCCG TCCTG GGC CAGGA TTTTTGCGTAGCGCT Pnap_1251 1347175 - 1347636 + | hypothetical protein TERM 1608 1347677 - 1347695 + F 71 -7.4 -3.92373 | overlap 1347668 1347665 CCTTGCGCCCGGCGG TCCGCG CTCATTT CGCGGA TTTCTCAATCCAGTC TERM 1609 1348055 - 1348038 - g 76 -7 -4.43213 | overlap 1348030 CCGAACACATGAAAA CCATGC AGGACG GCATGG CCATGATGGAGGGCA Pnap_1252 1347800 - 1348213 + | hypothetical protein Pnap_1253 1348227 - 1348487 + | hypothetical protein TERM 1610 1348859 - 1348836 - g 83 -5.3 -5.07652 | gap 1, overlap 1348837 1348839 CCTGGCAAAACAAAA TCAGGGCTGG AGCAG CCAGCCC-AA CCGAATCAGGGGGAT TERM 1611 1348857 - 1348839 - g 72 -11.7 -3.38754 | overlap 1348836 1348837 GGCAAAACAAAATCA GGGCTGG AGCAG CCAGCCC AACCGAATCAGGGGG Pnap_1254 1348593 - 1348883 + | hypothetical protein Pnap_1255 1348880 - 1349530 + | isoprenylcysteine carboxyl methyltransferase TERM 1612 1349867 - 1349817 - g 72 -7.5 -4.16146 | gap 2, overlap 1349818 1349854 AAAATAGTCCGAAAA GCGCTGCGGCGCAGCTTGCCGAGCC CAA GG-TCGAGAAGCT-CGCCGTTGCGG CCGACCCCTTGAAAA Pnap_1256 1349714 - 1350340 + | hypothetical protein Pnap_1257 1350388 - 1350813 + | hypothetical protein Pnap_1258 1350838 - 1353174 + | heavy metal translocating P-type ATPase Pnap_1259 1353672 - 1353205 - | hypothetical protein TERM 1613 1353711 - 1353754 + r 77 -11 -3.59262 | gap 1, overlap 1353712 TATTTGACGGCTTCA ATCGCCG-TGACGACCATGGC GCC GCCCTGGTCTTCAGCGGTGAA TTTCACCGTGTCGCC TERM 1614 1353712 - 1353753 + r 83 -14.5 -2.75343 | gap 1, overlap 1353711 ATTTGACGGCTTCAA TCGCCG-TGACGACCATGGC GCC GCCCTGGTCTTCAGCGGTGA ATTTCACCGTGTCGC Pnap_1260 1354513 - 1353695 - | blue (type1) copper domain-containing protein TERM 1615 1353764 - 1353805 + g 70 -10.1 -3.5393 | gap 1 GGTGAATTTCACCGT GTCGCCGGCCTTGACCTTGT CCA GCAAGGACGGGTCC-GCGAC TTTGAACACCATCGT TERM 1616 1353815 - 1353839 + g 72 -2.7 -4.72272 | opp_overlap 1353814 1353817, overlap 1353817 CGCGACTTTGAACAC CATCGTCATGC CCG GCATGTCCAGG TTTTTGATGGGGCCG TERM 1617 1354016 - 1354051 + g 90 -15.4 -3.72893 | gap 1 GCCCATGGCGGGCTT GGCGGGCTGGCCGCTGG AGG CCA-CGGCCACCGCGCC TTTCATGCCGGCGTC Pnap_1261 1355942 - 1354551 - | multicopper oxidase, type 3 TERM 1618 1354919 - 1354965 + g 88 -16.6 -3.25719 | overlap 1354958 GCTTGCCGACCAGGC CGCGATGGTCCACGCCAATC GTCGTCG GAATGGCGTGGCCCATGGCG TTCATGGTGTGGTGG TERM 1619 1355339 - 1355328 - G 73 -3.6 -4.72272 | overlap 1355330 1355334 GGCGCTGAGCAAAAA CACG AAGT CGCG GTCCACCTCGTCGAT Pnap_1262 1357183 - 1355984 - | putative outer membrane efflux protein involved in copper resistance TERM 1620 1356764 - 1356737 - G 89 -17 -3.14132 | gap 1 CTGCGCCTGCAGCAA GGCGGCCGC-GCC CTG GGCGGCGGCCACC GCCGTGATCCACGCC Pnap_1263 1357521 - 1357192 - | hypothetical protein TERM 1621 1357763 - 1357739 - g 71 -5.6 -4.27316 | gap 1 TGCGCGAATCGAAAA CCGG-GGCTGC ATCC ACGGCCGCCGG GGTCAGCGCGAGGCC Pnap_1264 1357581 - 1358105 + | hypothetical protein TERM 1622 1358379 - 1358367 - g 78 -3.4 -5.0925 | CTCGAAAATGAAAAA TCTG ACGCG CAGA GCCCAAAAAATGCTG Pnap_1265 1358230 - 1358766 + | hypothetical protein Pnap_1266 1358805 - 1359422 + | hypothetical protein TERM 1623 1359422 - 1359408 - f 85 -4.3 -5.22039 | CTCAAACTCAAAAAA TCAAC GCCGG GTTGA TGCAAAAGGCCGCAG TERM 1624 1359817 - 1359856 + G 72 -4.3 -4.60889 | opp_overlap 1359810 1359808 CGAATACATCGCCCG GCTGCTGAGCGT-GCGCAA GCCC TGGCGTTACGC-CACCAGC TTTTTCGGCATCATT TERM 1625 1360013 - 1360051 + G 75 -2.9 -4.83615 | overlap 1360016 GAATACCAGTCGCTG GGTCAGGCGCTGGCGGC CAGCC GCCGCAAGATCATGGTC TTTTTGTCGGCGGTG Pnap_1267 1359554 - 1360471 + | Ion transport protein Pnap_1268 1361049 - 1360492 - | YaeQ family protein Pnap_1269 1362544 - 1361153 - | coproporphyrinogen III oxidase TERM 1626 1361602 - 1361627 + g 71 -9 -3.74526 | gap 1 AGCCCTGGAAGTTGC GGTGCAGGCTC TTGTT GAGCC-GCGCC TTGTTCAGTTCATCG TERM 1627 1362194 - 1362176 - G 75 -11.6 -3.61398 | GTCGGCGTTGAAGAA GGTCGGCG TGC CGCCGCCC AGGTGCAACTGCACC TERM 1628 1363315 - 1363282 - g 84 -2.3 -5.33785 | overlap 1363285 AAGCATGACAAAAAA CACGGCAATGGTCAT GGCA ATGGCAATGGCCACG GAAAGGGCCACGACA Pnap_1270 1362949 - 1363338 + | hypothetical protein Pnap_1271 1363401 - 1363682 + | hypothetical protein Pnap_1272 1363756 - 1364193 + | UspA domain-containing protein TERM 1629 1364295 - 1364284 - g 72 -4.4 -4.58663 | overlap 1364285 1364287 AGTACCTTGGAAAAA TGAG TGGC CTCA AGGCCTCTGACGCGC Pnap_1273 1364229 - 1364468 + | hypothetical protein Pnap_1274 1364672 - 1365589 + | hypothetical protein Pnap_1275 1366352 - 1365597 - | short-chain dehydrogenase/reductase SDR TERM 1630 1365656 - 1365700 + g 75 -13.6 -3.05343 | GGGCCAGCCAGGCGA GCACGCGGCGGGCTG-CCTCGT CGG GCGAGGTCAGCTTGCCGCC-GC TCTTGAGGCTCTCGA TERM 1631 1365997 - 1365981 - G 78 -6.5 -4.56597 | GGTGGCCCGCAAAAA TGCCGCC GTC AGCAGCA TGGGCGCTTCCAGCC Pnap_1276 1367094 - 1366393 - | pseudouridine synthase Pnap_1277 1367408 - 1367091 - | hypothetical protein Pnap_1278 1368882 - 1367641 - | IS605 family transposase OrfB TERM 1632 1368093 - 1368103 + g 73 -3.2 -4.7373 | overlap 1368089 1368088 AATCTTCGACGGCGA CCAT CGC GTGG TTTTTACTGAGGTCG TERM 1633 1368582 - 1368600 + g 72 -3.7 -4.57341 | overlap 1368583 TGCCTTTTTTCTTGA AGCGCGG AAATC CTGCGCG TTTTTCAAAGAAGTT TERM 1634 1368932 - 1368944 + G 75 -3.3 -4.9218 | overlap 1368933 AAGGATATTCGCCAC GGCAG ACA CTGCG TTTTTCTGATGCATG Pnap_1279 1368905 - 1369321 + | transposase IS200-family protein TERM 1635 1369327 - 1369352 + T 87 -15.5 -2.90075 | gap 1, opp_overlap 1369322 1369323 GCCACATTAACCGCC GCAGCGGACACC TGC GGTGTCCGC-GC TATCCTTCCCCGCCC TERM 1636 1369360 - 1369379 + T 74 -10.6 -3.53444 | opp_overlap 1369372 GTCCGCGCTATCCTT CCCCGCCC TAAA GGGCGAGG TTTGCCGCGCACTCC Pnap_1280 1370695 - 1369397 - | NADH dehydrogenase TERM 1637 1369566 - 1369547 - G 81 -2.7 -5.24129 | CCCTTCGACAAAAAA GCTGCCC TTGCTC AGGCTGC CCATCAGGCTGCCAA TERM 1638 1371429 - 1371447 + G 75 -3 -4.87389 | overlap 1371416 CGCCGGCGCCTCGGC GGTGTATG CGA CCTGCGCC TTTCTTTTTGCCATC TERM 1639 1371696 - 1371714 + G 100 -17.4 -3.78034 | GGGCCTGCTGCGCGC GGCGCCGG CGG CCGGCGCC TTGTTGATGTCGGTG Pnap_1281 1370899 - 1372146 + | major facilitator superfamily transporter Pnap_1282 1373455 - 1372172 - | cytochrome c, class I TERM 1640 1372451 - 1372495 + g 79 -9.2 -4.1964 | gap 1 CACGCCCTCTCCTTT GTCGCCGTGGCACTGCGCGCA ATGC TGCTCGTAGAGCT-TGGCGGC TTTTGCGGTGTTGAA TERM 1641 1372652 - 1372676 + g 100 -12.7 -4.56597 | GGCCATCGGGCCGCT CGCCGAGGCGC CCG GCGCCACGCCG TTTTTGAGCAGGCCG Pnap_1283 1374237 - 1373452 - | putative cytochrome c TERM 1642 1373552 - 1373514 - G 76 -15.2 -2.52464 | opp_overlap 1373500 CGCTGCCGCAACGGA CGGCTTCGCTGCCCGGCG CCA CGGCAGGCAGCGAAGTGG CGGGATGGGTGTCGG Pnap_1284 1375120 - 1374302 - | alpha/beta hydrolase fold TERM 1643 1374534 - 1374524 - G 73 -8.2 -4.07568 | overlap 1374487 1374525 TTTCGCGCTCGAAAA CCGC GCG GCGG CCCAGAACTGGCGCC Pnap_1285 1376187 - 1375117 - | hypothetical protein TERM 1644 1375990 - 1375969 - G 85 -5.7 -5.01732 | AATGCCGCCAAAAAA TCCGACGGC GGGC GCCTGCGGA TCGGGCGAGCCGATG TERM 1645 1376225 - 1376236 + r 91 -7.2 -4.85782 | opp_overlap 1376218, overlap 1376216 TTGACACAGGCATGC GCCG CGCC CGGC TTTCTTTTTGGGGGA Pnap_1286 1376578 - 1376267 - | ferredoxin Pnap_1287 1376709 - 1377236 + | GCN5-related N-acetyltransferase Pnap_1288 1377744 - 1378112 + | hypothetical protein TERM 1646 1378145 - 1378160 + F 100 -11.8 -4.77157 | ACCCTGAAGTCCGAA GCCGCC CAAG GGCGGC TTTTTAATGCCTTCG TERM 1647 1378452 - 1378468 + G 78 -10.1 -4.09685 | ATCCTGGTGCCCGCC GCGCTGG CCA TCAGCGC TTTTGCGCCCTGGGG Pnap_1289 1378230 - 1379165 + | hypothetical protein TERM 1648 1379282 - 1379247 - T 70 -6.9 -4.07568 | gap 2, opp_overlap 1379272 TTTGTTGGCGCAAAA CGGCCAGCTG--CCC TTTTTTTC GGGTTCAGCCGGCCG GGTGGCCTCCCGGGC TERM 1649 1379613 - 1379645 + T 100 -18.5 -4.66833 | opp_overlap 1379616 CGCAAACGGCATAAA TAACCATCCCCCGGC AAA GCCTGGGGATGGTTG TTTTTCGGGTTCAGG TERM 1650 1379642 - 1379616 - T 100 -18 -4.09551 | opp_overlap 1379613 AAACGGCATAAATAA CCATCCCCCGGC AAA GCCTGGGGATGG TTGTTTTTCGGGTTC Pnap_1290 1380360 - 1379656 - | short chain dehydrogenase Pnap_1291 1381440 - 1380439 - | alcohol dehydrogenase Pnap_1292 1381829 - 1381539 - | short-chain dehydrogenase/reductase SDR Pnap_1293 1382581 - 1381982 - | TetR family transcriptional regulator TERM 1651 1382819 - 1382835 + H 70 -6.5 -4.13767 | overlap 1382810 1382820 1382822 GGTGACGCAGAGCGC GGACAGC TTT GCTGTCA TTTTCGGGTAACAAC TERM 1652 1383507 - 1383488 - g 74 -2.1 -4.88129 | gap 1, overlap 1383505 AAAAAGCATGAAAAA CGCTTGGC GAAAT ACCA-GCG GCGCATGAGCCGCAA TERM 1653 1383555 - 1383541 - g 73 -3.5 -4.76041 | overlap 1383525 1383542 CAGATTCAGCAAAAA CTGGC ACAAA GCCAA AAGAAAGGTTCAGAA TERM 1654 1383929 - 1383900 - g 75 -3.5 -4.91084 | AAGAAAACCGAAAAA CGCAAGCGAAG TTTGAATG CGTCGATTGCG GCTACGAGAACCACG Pnap_1294 1382867 - 1384102 + | IS605 family transposase OrfB TERM 1655 1384135 - 1384114 - T 100 -17.3 -3.14564 | TTAGCGCCGTAGGAA TCCCCCGCC TTCA GGCGGGGGA GGATGTCAAGACATT Pnap_1295 1385163 - 1384141 - | LysR family transcriptional regulator TERM 1656 1385338 - 1385316 - H 83 -9.9 -4.1822 | CTGCACCGCAACAAA TTGAAGCCC TTGAC GGGCTCCAA GCAGATGACAAGCTT TERM 1657 1385416 - 1385444 + G 70 -7.4 -4.07568 | gap 1, opp_overlap 1385429, overlap 1385417 ACCAACAGATCGACA TCGCGC-CCAAGC AGCC GCTTGGCGTGCGC TTTTACGGCCGCCGC TERM 1658 1386203 - 1386219 + G 93 -2.1 -5.64873 | overlap 1386207 CAGCGGCGCAAGCGG GGACGCT GCG AACGGCC TTTTTTCTTCTTCAA Pnap_1296 1385343 - 1386254 + | alpha/beta hydrolase domain-containing protein TERM 1659 1386368 - 1386395 + G 70 -9.8 -3.63805 | overlap 1386371 TGCGCTGGCCGTTCT GGTCGTCACCGG CGTG TCGGTGGCGGTC TTTGGCGTGTCCGCT TERM 1660 1386456 - 1386468 + G 70 -10.5 -3.64703 | GCGGTGGCTGAAGCG CCGGC CAC GCCGG TTTCCGTCGCCGCCG TERM 1661 1386561 - 1386589 + G 73 -8.7 -4.07568 | overlap 1386562 GTGGACATCCGCTCG CGCGTGGCCGGCA CCA TCCAGGCCACGCA TTTTCGCGAAGGCGC Pnap_1297 1386306 - 1386755 + | secretion protein HlyD Pnap_1298 1386789 - 1387550 + | secretion protein HlyD TERM 1662 1388400 - 1388412 + G 71 -9.1 -3.68073 | TCGGCCGGTTAGAGC TCGGC TCG GCCGA TTATTCGCTGCGCTC TERM 1663 1388554 - 1388539 - g 74 -4.6 -4.61231 | CGAGATTGCCAAAAA CATGCC CGAG GGCGTG GAATACCGCATCGCC Pnap_1299 1387583 - 1390828 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein Pnap_1300 1390870 - 1392276 + | RND efflux system outer membrane lipoprotein TERM 1664 1392314 - 1392349 + F 84 -3.2 -5.36441 | gap 1, opp_overlap 1392314, overlap 1392301 ATGCTATGTAATTAA TAGCTGCTTGCGCCCGT CCT GCTTGCGCA-GAAGCTA TTTTTTCTCTCAGGA TERM 1665 1392801 - 1392766 - g 81 -9.8 -4.24342 | opp_overlap 1392792 GTCGCGATCAAGAAA GCC-GCCGACAACGCC GCCTCG GGCGTT-CCGGCCGGC CAGGATTTCCACCTG Pnap_1301 1392448 - 1393701 + | methyltransferase small Pnap_1302 1393739 - 1394695 + | dihydrouridine synthase, DuS TERM 1666 1394779 - 1394807 + F 71 -9.5 -3.54158 | gap 1, overlap 1394775 1394780 AGAATCCCCTGGGTT TGCGGGCTCGCC TCTACC GGCG-GCCCGCC TTCCTTGTTGCACTC TERM 1667 1394780 - 1394806 + F 76 -13 -2.72013 | gap 1, overlap 1394779 1394775 GAATCCCCTGGGTTT GCGGGCTCGCC TCTACC GGCG-GCCCGC CTTCCTTGTTGCACT TERM 1668 1395247 - 1395260 + G 74 -2.3 -4.85782 | overlap 1395225 TCCTACCTGTTCAGC TACGG CCTG CCGCA TTTCTTTTTCCACAC Pnap_1303 1394839 - 1395348 + | hypothetical protein Pnap_1304 1396641 - 1395460 - | nitric oxide dioxygenase TERM 1669 1396213 - 1396171 - G 85 -14.7 -3.59979 | gap 1, opp_overlap 1396172 GCGCGCCACGCGAAA CG-CGCGTCCGCCGCGCCAG CCGC CAGGGGCGGCGGCCACGTCG GCGTAAATCTTTTCT TERM 1670 1397417 - 1397403 - g 93 -8.5 -5.02074 | TGATGGCCGAAAAAA GCGCG CCGCC CGCGC TGATCGGCCAAAGCC TERM 1671 1398240 - 1398189 - g 76 -10.6 -3.85698 | gap 1, overlap 1398207 CGGTGGCGCCAGAAA GCGC-GGCGGCAGGAACCACGGCGG CGG CCACGGATACGCCCGCCGCCAGCGC TGCGACGCCCGTCGA Pnap_1305 1396832 - 1398421 + | anaerobic nitric oxide reductase transcription regulator TERM 1672 1398547 - 1398586 + T 91 -12.2 -4.11216 | gap 1 CATGCGCCCCTTGTT GGGCACGACCTGGCAGC CGGTGAT GC-GCCAGGTCTTGTCC TTTTGCCGCTGCAGG Pnap_1306 1398990 - 1398526 - | hypothetical protein TERM 1673 1398832 - 1398799 - G 81 -8 -4.43477 | overlap 1398793 1398800 TGCAGCGAACGAAAA CGCCGCGCGGGC GTCGTCCCTG GCCAGCGCGGCC AGTTGGCCTTCAACC TERM 1674 1398850 - 1398861 + g 70 -7.2 -3.99592 | opp_overlap 1398849 TTGGCCTTCAACCAC GGCG CGCA CGCC TTTCTCGTCGTCGCT TERM 1675 1399161 - 1399207 + H 95 -8 -4.94962 | gap 2, opp_overlap 1399149 1399159, overlap 1399160 1399159 TCAGGGCACTGAAGC GGCCGGGATG-GCCCGCG-CTG ATTGG TAGTCGCAGCCTCATCCTGGCC TTTTGTTTCCATTCT TERM 1676 1399361 - 1399379 + G 91 -6.6 -5.27335 | overlap 1399363 GCAGCTCGATTTGTC GAGCATCG GGC CGGTGCGC TTTTTGTTTCCGAGC TERM 1677 1399565 - 1399542 - g 74 -2.4 -4.86621 | opp_overlap 1399555 ATCGCCAACGAAAAA GCGCGC-GGC ATTGCG GCCAGC-CGC ATCGTGGTCGCCGGT TERM 1678 1399701 - 1399684 - g 93 -7.7 -5.00616 | gap 1, overlap 1399686 CGCTGGCTGAAAAAA CGCTTGCC GAA GGCA-GCG CCGCCAACAAGGACG Pnap_1307 1399239 - 1399901 + | phospholipase/carboxylesterase TERM 1679 1400148 - 1400118 - g 83 -6.7 -4.89063 | GCATTGAAAAAGAAA GCCTGCGCGCC CAGCCCAGC GGCGCCCTGGC GCTGACGCCGCATCC Pnap_1308 1400006 - 1401589 + | glutamate--cysteine ligase TERM 1680 1401757 - 1401747 - T 77 -8.2 -4.07568 | GCCGGGCTCTGAAAA GGGG TAG CCCC GCGTTGTCTCAGTTT Pnap_1309 1402374 - 1401766 - | hypothetical protein TERM 1681 1402390 - 1402333 - G 79 -9.1 -4.15565 | opp_overlap 1402382 TCCATCACGGCAAAA CGCACCTCCAGCGGC-ACGCCACCAGC GGCGCT GC-GGCAGCATTGCCGGTGGCGGCACG GGCGCCTGTGGTTGC TERM 1682 1402649 - 1402639 - R 85 -4.6 -5.15634 | CACTGCACGAAAAAA CAGG CTT CCCG CGCTAATCGCCTTCG Pnap_1310 1403143 - 1402652 - | hypothetical protein Pnap_1311 1403986 - 1403585 - | hypothetical protein Pnap_1312 1404031 - 1404990 + | GTP-binding protein, HSR1-related Pnap_1313 1405129 - 1405497 + | hypothetical protein Pnap_1314 1405557 - 1406129 + | hemerythrin HHE cation binding domain-containing protein Pnap_1315 1406308 - 1407024 + | CRP/FNR family transcriptional regulator Pnap_1316 1407200 - 1407943 + | cyclic nucleotide-binding domain-containing protein Pnap_1317 1408046 - 1408327 + | hypothetical protein Pnap_1318 1408548 - 1410494 + | hypothetical protein Pnap_1319 1410542 - 1411672 + | OmpA/MotB domain-containing protein TERM 1683 1411729 - 1411749 + F 100 -5.3 -5.61596 | opp_overlap 1411730, overlap 1411730 GCGGAGAAAAAGAAA AGGGCGC AGGGTTG GCGCCCC TTTTTTTGTCCGGAT TERM 1684 1411748 - 1411730 - f 100 -8.8 -5.35224 | opp_overlap 1411729 1411730 CGGAGAAAAAGAAAA GGGCGC AGGGTTG GCGCCC CTTTTTTTGTCCGGA TERM 1685 1411730 - 1411748 + F 76 -8.8 -3.95873 | opp_overlap 1411730, overlap 1411729 CGGAGAAAAAGAAAA GGGCGC AGGGTTG GCGCCC CTTTTTTTGTCCGGA Pnap_1320 1412240 - 1412509 + | hypothetical protein TERM 1686 1412872 - 1412859 - g 77 -3.7 -4.91109 | overlap 1412861 GCTGCACCAGAAAAA GCGCC GGCT GGCCC TGCTGCAATCGCGCC TERM 1687 1413037 - 1413012 - g 75 -3.9 -4.7078 | gap 1, opp_overlap 1413017, overlap 1413013 TGAAGCATGGAAAAA GGACTGGACGGC CGG GCGCTCCAG-CC AGTTCTTTGTATTGG Pnap_1321 1412506 - 1414134 + | IS605 family transposase OrfB Pnap_1322 1414184 - 1414579 + | hypothetical protein TERM 1688 1414709 - 1414736 + F 88 -13.4 -3.36273 | opp_overlap 1414720 TCGGCTGATGCGCCG GGGGCAGCAGAG CCTG CGCTGTTGCCCC TTGATGTTCAACCAA Pnap_1323 1414774 - 1415220 + | heat shock protein Hsp20 Pnap_1324 1415256 - 1415843 + | heat shock protein Hsp20 TERM 1689 1416590 - 1416562 - g 100 -10.1 -4.6902 | CGAGAAGTTCAAAAA GCTCGCCGCCGAC ATC GCCGAGGGCGCGC AGCCCGTGACGTTCA TERM 1690 1416698 - 1416681 - g 83 -4.7 -5.00616 | opp_overlap 1416681 TGCTGTCGGAAAAAA GCGGCAC GTTT GCGCTGC TGTGGCATGTGGGCA Pnap_1325 1415957 - 1416892 + | phosphoesterase, DHHA1 TERM 1691 1417171 - 1417150 - T 100 -15.9 -5.81032 | overlap 1417138 CAACGCTAAAAAAAA GCGCGACAG AGAA CTGTCGCGC CTGTCAAGTCGCCGG Pnap_1326 1418635 - 1417235 - | nitrite reductase, copper-containing TERM 1692 1417628 - 1417642 + g 95 -10 -4.56597 | CATCATGTGCTCGGG CTGCTC CTT GAGCAG TTTTTCAAGCGAGAA TERM 1693 1418598 - 1418611 + g 75 -3.8 -4.77165 | ACAACACCGATGACT GCTG CGGCTA CAGC TTTTCTTATAAAACC TERM 1694 1418670 - 1418692 + r 100 -13.4 -5.0538 | overlap 1418671 AGTTCACTGGCATGT TCTGGCGCGG GAT TCGCGCCAGG TTTTTTGCGCTCCAC TERM 1695 1418671 - 1418691 + r 95 -14.7 -3.62746 | overlap 1418670 GTTCACTGGCATGTT CTGGCGCGG GAT TCGCGCCAG GTTTTTTGCGCTCCA Pnap_1327 1419372 - 1418866 - | BadM/Rrf2 family transcriptional regulator TERM 1696 1420142 - 1420162 + G 76 -6.9 -4.4648 | overlap 1420138 CCGACGCGGATGACC TGAAGGC GCTTCCG GCCTTCA TTTTCTGGTCCGCAT Pnap_1328 1419586 - 1421862 + | putative nitric oxide reductase (subunit B) transmembrane protein Pnap_1329 1421959 - 1422222 + | hypothetical protein TERM 1697 1422270 - 1422315 + F 76 -5.5 -4.70879 | gap 3, opp_overlap 1422254, overlap 1422269 1422273 GGCGGCGCTGCCCTC CAG--GTGCCAGG-ACGCGGGT TGACC ACCGGCGGGCCTGGCACTGCTG TTTTTGGCCTTTGCG TERM 1698 1422273 - 1422310 + F 76 -12 -3.02233 | gap 1, overlap 1422269 1422270 GGCGCTGCCCTCCAG GTGCCAGG-ACGCGGGT TGACC ACCGGCGGGCCTGGCAC TGCTGTTTTTGGCCT Pnap_1330 1422288 - 1422755 + | invasion gene expression up-regulator, SirB Pnap_1331 1423058 - 1423684 + | hypothetical protein TERM 1699 1423677 - 1423663 - T 82 -11.4 -3.82824 | CATGATGCATAACAA CGACCG ATA CGGTCG CGGCTGACAGCCCGC TERM 1700 1423740 - 1423777 + T 100 -27.2 -5.15969 | opp_overlap 1423735 AAGCAGCGAATCCCG GCCAGCCAGTCCAGCC CAGCAA GGCTGGACTGGCTGGC TTTTTTGCGTTCAGC Pnap_1332 1424267 - 1423788 - | thioredoxin TERM 1701 1424273 - 1424301 + r 75 -5.9 -4.57569 | AAGCACTCAACGCGG CTGCCGACTGG CGGGCAA TCAGGCGGCGG TTTTTGGCAGCATGC Pnap_1333 1424842 - 1424291 - | cytochrome B561 Pnap_1334 1425059 - 1425616 + | putative lipoprotein Pnap_1335 1426251 - 1425586 - | pseudouridine synthase Pnap_1336 1428165 - 1426285 - | amidohydrolase 3 Pnap_1337 1428850 - 1428233 - | antibiotic biosynthesis monooxygenase Pnap_1338 1429510 - 1428860 - | isochorismatase hydrolase TERM 1702 1429383 - 1429363 - G 79 -9.6 -4.11216 | opp_overlap 1429370 TCGGCACCTTGAAAA GCCGGGCC GCCTT GGCCAGGC CGATGACGTTGTTCT TERM 1703 1429439 - 1429472 + g 73 -8.2 -4.09685 | gap 1, overlap 1429440 CACGCCGAACGTCAT TTGCG-GCTGGTGGT CGATC AGCACCAGCGCGCAG TTTTCAGGGGTCAGC TERM 1704 1430085 - 1430124 + G 100 -19.2 -3.87815 | GAGCTGGAGGACTCT TCGCTCGCGGCGCGGCGC CTGT GCGGCGTGCCCCGGGCGA TTTATGCCGCTCCCG Pnap_1339 1429632 - 1430534 + | LysR family transcriptional regulator Pnap_1340 1431125 - 1430550 - | hypothetical protein Pnap_1341 1431693 - 1431235 - | hypothetical protein TERM 1705 1431501 - 1431484 - G 72 -4.1 -4.57073 | gap 1 GACTTCGGTGAAAAA CGCATGGT CAA ACC-CGCG TGTTGATTCAAGCAC Pnap_1342 1432667 - 1431777 - | peptidase M23B TERM 1706 1432206 - 1432245 + g 70 -7.6 -4.07568 | overlap 1432218 GAACGTCGCCATGAC CGTGGCCTGGTGCGCGCG CTCG CGCTCGTAGCGCGCCTCG TTTTCGGGCGACAGA Pnap_1343 1434041 - 1432806 - | geranylgeranyl reductase Pnap_1344 1434410 - 1434192 - | hypothetical protein Pnap_1345 1434809 - 1434642 - | DNA polymerase, beta-like region Pnap_1346 1435461 - 1435252 - | cold-shock DNA-binding domain-containing protein Pnap_1347 1436080 - 1435451 - | retron reverse transcriptase TERM 1707 1435664 - 1435686 + g 77 -4.2 -4.88067 | TGTTTTTGTAATATT TATTACATCG TAA TGAGGTAATA TTTTTCTAAGTCGCT TERM 1708 1435926 - 1435946 + g 90 -2.5 -5.39905 | AAGTTTTCTGGATTT GATGCCGAT AAA ATTCGCGTC TTTTTATTCTTTAGT TERM 1709 1436144 - 1436132 - R 100 -3.4 -6.15828 | opp_overlap 1436137 GGTATCAAAAAAAAA CTAG ATTTG CTAG GTGCGAACTTGTACA Pnap_1348 1436630 - 1436121 - | retron reverse transcriptase TERM 1710 1436700 - 1436671 - R 76 -5.2 -4.7889 | gap 1, overlap 1436696 ATAAAGATTTAAAAA TTGGAATCCATCT GATTA AGA-GAATTCCAA AATCGGACCAACGAT TERM 1711 1436731 - 1436756 + r 85 -12.7 -3.4758 | AGGCTCCACTTTTGT TATTCCCGAGC CCAC GCTTGGGAATA TTCATCTTCTTAGTG TERM 1712 1436783 - 1436799 + r 86 -3.7 -5.36364 | overlap 1436784 AGTGATGCAAGCACC ACAACTT TTT AAGTTGG TTTTTGTCTTTTTCG TERM 1713 1437130 - 1437093 - R 74 -7.7 -4.1144 | gap 1, opp_overlap 1437103 AAAAAATCAATCAAA GAGCAGTGGA-TCAGGTG CTA CACCTGATTTCGCAGCTC AGCTACGAATCACAA TERM 1714 1437103 - 1437119 + r 74 -10.9 -3.55563 | opp_overlap 1437093 TCAAAGAGCAGTGGA TCAGGTG CTA CACCTGA TTTCGCAGCTCAGCT Pnap_1349 1437496 - 1437305 - | hypothetical protein Pnap_1350 1437747 - 1437493 - | hypothetical protein Pnap_1351 1439624 - 1437747 - | glutaminyl-tRNA synthetase Pnap_1352 1439759 - 1440211 + | hypothetical protein TERM 1715 1440260 - 1440244 - T 89 -9.4 -4.58283 | opp_overlap 1440244 TAACGTCCTGAAAAA GCCTGC TTCGT GCAGGC TTTTTTGTTGGGCGT TERM 1716 1440244 - 1440260 + T 100 -9.4 -5.45652 | opp_overlap 1440244 TAACGTCCTGAAAAA GCCTGC TTCGT GCAGGC TTTTTTGTTGGGCGT Pnap_1353 1440929 - 1440339 - | hypothetical protein TERM 1717 1440479 - 1440499 + g 86 -16.1 -3.17194 | TGATGTTCTGCATCA CGCCTGGCG CTG CGCCGGGCG TTCCCTTGGACAACT TERM 1718 1440900 - 1440921 + g 78 -5.1 -4.75404 | GGCGCTTTTGCTGTG CGCCCATAA GGTG TTGTGTGCG TTTTTCATCGGGTTT Pnap_1354 1441308 - 1442366 + | porin TERM 1719 1442389 - 1442420 + T 100 -7.2 -5.42265 | opp_overlap 1442392, overlap 1442392 AGGTGAGGTAATTTA AAGCCGGTCCTGTT TTAC AGCGGGGCCGGTTC TTTTTTATACTTTCC TERM 1720 1442392 - 1442417 + T 100 -11.1 -4.75967 | opp_overlap 1442392, overlap 1442389 TGAGGTAATTTAAAG CCGGTCCTGTT TTAC AGCGGGGCCGG TTCTTTTTTATACTT Pnap_1355 1443168 - 1442521 - | hypothetical protein TERM 1721 1442742 - 1442713 - G 83 -12.1 -4.10161 | gap 1, opp_overlap 1442712, overlap 1442716 CACCAGCCGCGAAAA GCAGGCCACGCAGG TTT CCTGCAGGGCC-GC ATCTTCGGCATGCAT TERM 1722 1442740 - 1442716 - G 75 -13.5 -3.08508 | opp_overlap 1442712, overlap 1442713 CAGCCGCGAAAAGCA GGCCACGCAGG TTT CCTGCAGGGCC GCATCTTCGGCATGC TERM 1723 1443823 - 1443848 + G 78 -5.3 -4.68645 | gap 1, overlap 1443825 1443831 GCGGCATGCTGCTGG GCCTGTCG-CGC AAG GCGGCGACCGAC TTTTCGTTTTACCTG Pnap_1356 1443279 - 1444112 + | putative undecaprenol kinase Pnap_1357 1444972 - 1444121 - | hypothetical protein TERM 1724 1444483 - 1444493 + g 72 -2.4 -4.72272 | CCTGCTCGTCCCAGC GGGC AAA GGCC TTTTTGCTGCGAAAG TERM 1725 1444737 - 1444721 - G 76 -5.7 -4.60487 | overlap 1444711 CATCAGGCTTAAAAA GCCGCCC AGC GAGTGGC CCACCAAAAAGGCGG TERM 1726 1445008 - 1444989 - R 76 -12.1 -3.04853 | opp_overlap 1444988, overlap 1444984 GAAATTTAAAGGACA CCGCGGC GCGCTG GCCGCGG CTATTGCCCGGGTTG Pnap_1358 1445877 - 1445050 - | 20S proteasome, A and B subunits TERM 1727 1445901 - 1445934 + r 91 -3.7 -5.65513 | gap 1, opp_overlap 1445903, overlap 1445903 GAGGAAGGTTGAGTA CAGGGC-GTGCCGC GGTTCAG GCGGCGCTGGCCAG TTTTTTTAGTTGGTA Pnap_1359 1448529 - 1445917 - | DNA mismatch repair protein MutS TERM 1728 1446609 - 1446665 + g 84 -10.9 -4.11216 | gap 1, overlap 1446603 1446602 CGATCAGCGCGACCT GCCGCATGTAGGTCGATTTGCCGCCC ATGTTG GGGCCGGTGATC-ATCTGCATGCGGC TTTTGCCAGTCAGGC TERM 1729 1446927 - 1446942 + g 70 -11.8 -3.14132 | CGTACAGCCACTTCT CGCGCG CCAG CGCGCG TTCCTGCGCCGACAG TERM 1730 1448545 - 1448556 + r 71 -4.4 -4.60255 | TCAGTGTCTTGTCTT CATC TGGC GATG TTTTTGCGGCCTTGT Pnap_1360 1449588 - 1448698 - | hypothetical protein TERM 1731 1448832 - 1448793 - G 74 -15 -2.64616 | gap 1, overlap 1448802 CGCCCAGCCAGAGCA CCG-CGAACAGCGCGCCGA AGG CCGGCTCGCTGCTCGTCAG CAAGGCGACGCGGCT TERM 1732 1449296 - 1449277 - G 73 -2.8 -4.72986 | gap 1, overlap 1449258 1449255 CAGGCTGATCAAAAA CGC-GGC GTTGCTG GCCTGCG TGTGCGCGACGCCAA Pnap_1361 1449679 - 1450593 + | LysR family transcriptional regulator Pnap_1362 1450788 - 1451132 + | hypothetical protein TERM 1733 1451314 - 1451347 + G 76 -8.1 -4.15222 | gap 1, overlap 1451283 1451282 1451300 TGGGCCGCGCAGGCG GCCAGC-GGCGGGGCT TTT GGCTTTGTCAGCTGGC TTTATTACGGACGCT TERM 1734 1451507 - 1451553 + G 91 -12.2 -4.26076 | gap 2, overlap 1451507 1451509 CTTGGCGCGCGCTCG CC-GCGCTG-GCCGCGACGGCG CTGAC CGCCGCTGCGGTGCTGCGCTGG TTTTCGTGAGGCTCG TERM 1735 1451507 - 1451552 + G 70 -12.4 -3.15324 | gap 1, overlap 1451507 1451509 CTTGGCGCGCGCTCG CCGCGCTG-GCCGCGACGGCG CTGAC CGCCGCTGCGGTGCTGCGCTG GTTTTCGTGAGGCTC TERM 1736 1451509 - 1451550 + G 76 -13.6 -3.13504 | gap 1, overlap 1451507 1451507 TGGCGCGCGCTCGCC GCGCTG-GCCGCGACGGCG CTGAC CGCCGCTGCGGTGCTGCGC TGGTTTTCGTGAGGC Pnap_1363 1451152 - 1451562 + | hypothetical protein Pnap_1364 1452343 - 1453125 + | hypothetical protein Pnap_1365 1455391 - 1453157 - | protein of unknown function DUF893, YccS/YhfK TERM 1737 1455966 - 1455999 + G 83 -5.1 -5.03715 | overlap 1455967 1455974 AACGGTGGGGCCGCC AGCTGGTCGGCGCGA CATT TCGCGTCTATCTGCG TTTTTTAAGCGTCAT TERM 1738 1456474 - 1456502 + G 80 -5.1 -4.87665 | overlap 1456485 CATCCGGCTTGGCAA GCGCTTTGATCCG CCG CAGAACACGGCGC TTTTTGTCAGTGAGC Pnap_1366 1455776 - 1456588 + | phospholipid/glycerol acyltransferase TERM 1739 1456574 - 1456593 + F 74 -2.8 -4.91778 | gap 1, overlap 1456575 CCGGACTTTCCCGTG TCGCCTGCG TCT TG-AGGCGG TTTGTTTTATGTTTA TERM 1740 1457335 - 1457348 + G 75 -4.5 -4.78764 | CCTGGATGCACAGCC GCCTG TTCG TAGGC TTTTTGCTGCGTTTG Pnap_1367 1456602 - 1457414 + | glycosyl transferase family protein fabG 1458148 - 1457411 - | 3-ketoacyl-(acyl-carrier-protein) reductase Pnap_1369 1458600 - 1458145 - | hypothetical protein Pnap_1370 1459505 - 1458669 - | hypothetical protein TERM 1741 1459296 - 1459248 - G 89 -17.4 -3.22388 | opp_overlap 1459267, overlap 1459235 CACCGAAGGCAGCAA GCTGGCCTGCAGGCC-GGATGCGG TCA CCGCTTCCTGGCC-GATGGCCAGC GAAACCCTGACCACG Pnap_1371 1460634 - 1459537 - | 3-oxoacyl-(acyl carrier protein) synthase I Pnap_1372 1461486 - 1460764 - | phosphoesterase, PA-phosphatase related TERM 1742 1461039 - 1461076 + g 76 -5.5 -4.56597 | gap 1 AAAAGGCGGTGGCCA CATGCA-GGGACGGGCAG GCA TTGCCCGACGCATCCATG TTTTTCAGGAAAAGC TERM 1743 1461393 - 1461407 + g 72 -7.8 -4.13945 | opp_overlap 1461382 1461391 1461393 ACAGGCTGATGAACA GCGTCG TGC CGATGC TTTTCACATAAAAAT TERM 1744 1461442 - 1461422 - G 81 -3.8 -4.96848 | overlap 1461423 1461435 CTTTTCACATAAAAA TGCCGGGG AATGA CCTCGGCC GCCTGCCGATACCAC Pnap_1373 1462286 - 1461483 - | polysaccharide deacetylase TERM 1745 1461794 - 1461783 - G 76 -5.8 -4.56597 | opp_overlap 1461790, overlap 1461785 CGGCGCCCGGAAAAA CAGC GGGC GCTG GCCGCAAACCCGGGT TERM 1746 1461989 - 1461975 - G 91 -3.5 -5.47218 | gap 1, overlap 1461976 GCCGATGCAAAAAAA GGTCGC CCGG GCG-CC ATAGCGTTCCAGCAG Pnap_1374 1464615 - 1462279 - | hypothetical protein TERM 1747 1462836 - 1462858 + g 90 -2.7 -5.47218 | gap 1, overlap 1462798 1462797 1462837 CGGTCGCGGTCAGCG GCAGCAA-GG CGCG CCATTGCTGG TTTTTTTCAATCAGC TERM 1748 1462878 - 1462901 + g 81 -3.8 -5.03314 | opp_overlap 1462876, overlap 1462887 TTTCAATCAGCAAGG CATCAATCGC CATG GCCATGGATG TTTTTTCAAGGTCGG TERM 1749 1463499 - 1463474 - G 71 -4.6 -4.46212 | overlap 1463476 TGCGGCAGCACAAAA CGGGTCACCA GGGCGG CGGCGACCAG CCCGGCAATCGAATA TERM 1750 1463948 - 1464003 + g 76 -14.1 -3.15663 | gap 3, opp_overlap 1463917 1463977 ATCACCAGCCTGGCC GCCGCCGT-GCCGCCGGCT-GCA-GTGT CAA ACGCCTGCTGGATGGCGGCCATGGCGGC TTGCTGGGCATCGGT TERM 1751 1464612 - 1464574 - G 78 -5.2 -4.7373 | gap 1, opp_overlap 1464596 1464604 GCAGCCCAGCAAAAA CGCCAGCCACAGCGCAA TCGCCG TCATGCCGCGGC-GGCG CATCGACTTCATCAC Pnap_1375 1465274 - 1464624 - | putative transmembrane protein Pnap_1376 1466258 - 1465278 - | lipid A biosynthesis acyltransferase TERM 1752 1465893 - 1465871 - G 88 -7.6 -4.91109 | overlap 1465872 CGCCGATCAGAAAAA GGCCCTGGCC GTC GGCCAGAACA TCGTCCACCAGAGCC TERM 1753 1465892 - 1465872 - G 73 -11.1 -3.54183 | overlap 1465871 GCCGATCAGAAAAAG GCCCTGGCC GTC GGCCAGAAC ATCGTCCACCAGAGC TERM 1754 1466082 - 1466063 - G 71 -4.8 -4.41348 | overlap 1466065 CGCGGCGCAAATAAA GGCGCGAC ATGC GGCGGGCC GCCGGCGCAAACGCC TERM 1755 1466155 - 1466129 - G 74 -12.2 -3.46602 | overlap 1466130 TGGCGTACAGCACAA CGCGGCTGGCAC CGC GCCCCAGCCGCA GCGACAGCCAGGTCA TERM 1756 1466154 - 1466130 - G 71 -13.5 -2.67747 | overlap 1466129 GGCGTACAGCACAAC GCGGCTGGCAC CGC GCCCCAGCCGC AGCGACAGCCAGGTC TERM 1757 1466227 - 1466253 + g 73 -13 -3.14132 | gap 1 TGCCATTGCGCGCTG GCCGGCGCTGC GGCATG GC-GCGCCGGC TTCATGGCGCCAGCG Pnap_1378 1468595 - 1467915 - | putative transmembrane protein TERM 1758 1468338 - 1468320 - G 86 -7.4 -4.7254 | ATGCTCCAGCAAAAA CACCCAGT TGT AATGGGTG ATCAGCCAGTCCCTG Pnap_1379 1468888 - 1468592 - | acyl carrier protein TERM 1759 1468923 - 1468958 + r 100 -13.3 -4.07568 | overlap 1468925 GGATGAATGGCGGAT TGCCCATCTCCGGCG CAGGCA CGCCGGAGATGCGGA TTTTAAAAGCCGGCC TERM 1760 1468925 - 1468957 + r 93 -15.7 -3.04398 | gap 1, overlap 1468923 ATGAATGGCGGATTG CC-CATCTCCGGCG CAGGCA CGCCGGAGATGCGG ATTTTAAAAGCCGGC Pnap_1380 1469965 - 1468973 - | inositol-phosphate phosphatase TERM 1761 1469362 - 1469345 - G 81 -4 -5.00616 | overlap 1469347 GCCGGTTTCAAAAAA GCCGTC GGTGAA GCCGGC CGCGACGTGCGCCAG TERM 1762 1470275 - 1470303 + G 73 -8.7 -4.09685 | opp_overlap 1470275 1470274 1470277 GCGGCGCGAGGAAAC CATCCAGCGGGCC AGC GGCGCGCTCGACG TTTTGAACAATGCGC TERM 1763 1470334 - 1470391 + G 70 -7.6 -4.07568 | gap 2, opp_overlap 1470315 1470314 GGATTGTCGAGACGC TCGACGAGGCGCTCGACGGCATGGCGCA TCTG TGCGCCACGGCCATGA-CGCCGCG-CGA TTTTGGCCCGCCGAC Pnap_1381 1470027 - 1470962 + | tRNA/rRNA methyltransferase (SpoU) Pnap_1382 1470972 - 1471751 + | serine O-acetyltransferase Pnap_1383 1472431 - 1471832 - | molybdenum cofactor synthesis domain-containing protein Pnap_1384 1473036 - 1472428 - | hypothetical protein TERM 1764 1473848 - 1473863 + G 71 -6 -4.37092 | opp_overlap 1473838 AATCACCCCTGGCCG CCGGCC TGCT GGGCGG TTTTGTGCAGGCCGT Pnap_1385 1473043 - 1474452 + | peptidase U62, modulator of DNA gyrase TERM 1765 1474533 - 1474489 - f 84 -2.9 -5.40072 | gap 1, overlap 1474494 TTCCTGGTAAAAAAA TGTAATCTCCC-TGCTCACA TATGTT TGTGAGCACAGGGGAATCCA ATTGGCTTTAAAACA TERM 1766 1475194 - 1475182 - g 76 -6.2 -4.59773 | GGTGACCCCCAAAAA CGGC GGCAA GCCG GTAGAGATGGATTTT TERM 1767 1475250 - 1475229 - g 78 -12.3 -3.7108 | gap 1, opp_overlap 1475236, overlap 1475230 ACGGCCAGACCGAAA CCCGGCTGGC GCC GCCAGC-GGG CGCCTATGTCCTGAA Pnap_1386 1474535 - 1475341 + | hypothetical protein Pnap_1387 1475803 - 1475342 - | GatB/Yqey domain-containing protein TERM 1768 1475892 - 1475868 - R 100 -12.2 -5.86976 | gap 1 TGAGAAAACAAAAAA GCCCGC-AGAG CGTC CTCTTGCGGGC TTGAGCTGCCGTGAG rpsU 1476138 - 1475926 - | 30S ribosomal protein S21 TERM 1769 1476046 - 1476063 + g 73 -3.3 -4.7078 | overlap 1476047 CTCACGCGCACGCAA GTCGGTC AGCA GGCCGAG TTTTTCGATGGTTCG Pnap_1389 1476355 - 1476254 - | HI0933-like protein Pnap_1390 1476394 - 1476699 + | hypothetical protein Pnap_1391 1476696 - 1477079 + | hypothetical protein Pnap_1392 1477403 - 1477185 - | cell divisionFtsK/SpoIIIE Pnap_1393 1478557 - 1477520 - | ISXo7 transposase Pnap_1394 1478823 - 1480103 + | transposase, IS4 family protein TERM 1770 1481097 - 1481087 - g 76 -6.8 -4.44548 | GACACCGAAGCAAAA CTCC AGC GGAG GCAAGTCAAGTCTGA Pnap_1395 1480308 - 1481375 + | transposase IS116/IS110/IS902 family protein TERM 1771 1482400 - 1482377 - g 76 -13.2 -3.53444 | overlap 1482380 GCAGCGCTGGGCAAA CAAGACCAGC ATAT GCTGGCCTTG CAGGCGGTGCCGGGC TERM 1772 1482397 - 1482380 - g 74 -9.1 -3.90744 | overlap 1482377 GCGCTGGGCAAACAA GACCAGC ATAT GCTGGCC TTGCAGGCGGTGCCG TERM 1773 1482688 - 1482635 - g 75 -13.7 -3.10056 | gap 1 AGGACGCAGCGAACA GGCTG-GATCACCGCGCTGCTGGCCC GCA GGCCCTACAGCGTGGTGGTCGCGGCC TTGGCCAACAAGCTG Pnap_1396 1481747 - 1482787 + | transposase IS116/IS110/IS902 family protein TERM 1774 1482995 - 1482980 - g 73 -6.8 -4.27443 | CCAGCAGGAAAACAA GCCTGC ACAA ACAGGC CGCATATAAGACTGC Pnap_1397 1482910 - 1483149 + | hypothetical protein Pnap_1398 1484097 - 1483192 - | hypothetical protein Pnap_1399 1484375 - 1484130 - | hypothetical protein Pnap_1400 1485702 - 1484455 - | hypothetical protein TERM 1775 1485559 - 1485578 + g 78 -3.4 -5.00884 | opp_overlap 1485552, overlap 1485563 GGTGAAATTGCAGCG TCCGCCGC CCGA GATGCGGA TTTTTTCGGCCACCT Pnap_1401 1486839 - 1485847 - | hypothetical protein TERM 1776 1486268 - 1486295 + g 72 -4 -4.63486 | gap 1 TATTCGGCGTTGCTG GC-CTCGCACTGC TGC GGGGTGCGTGCGC TTTTGTTGGCGCAAT TERM 1777 1486298 - 1486325 + g 93 -7.8 -5.00467 | overlap 1486320 1486320 GGGGTGCGTGCGCTT TTGTTGGCGCAA TCCT TTTCGTCAACAA TTTTGTTGTTGTTGC Pnap_1402 1487691 - 1486906 - | uroporphyrin-III C-methyltransferase Pnap_1403 1488593 - 1487688 - | hypothetical protein TERM 1778 1488524 - 1488565 + g 91 -9.3 -4.54205 | gap 1, overlap 1488522 1488525 1488536 GCAGGTCGGCGGCCT GCGCGCGTGACAGGGGACGG GCG CCGTCCT-TGCCGCGCCCGA TTTCTTTGATGTAGT TERM 1779 1488525 - 1488564 + g 74 -12.8 -3.31438 | gap 1, overlap 1488522 1488524 1488536 CAGGTCGGCGGCCTG CGCGCGTGACAGGGGACGG GCG CCGTCCT-TGCCGCGCCCG ATTTCTTTGATGTAG Pnap_1404 1491514 - 1488647 - | molybdopterin oxidoreductase TERM 1780 1491213 - 1491201 - G 85 -5.5 -5.03994 | CCCGAGATATAAAAA CCAAC GGC GTCGG GTCCGTGCTCGCGGA Pnap_1405 1491967 - 1491545 - | nitrite reductase (NAD(P)H), small subunit Pnap_1406 1492775 - 1491984 - | hypothetical protein TERM 1781 1492663 - 1492687 + g 74 -4.9 -4.66163 | overlap 1492652 1492655 ATGCGCTGGCGGCCC GCCTTGTTGAT GGC ATCGCCCAGGC TTTTTACCTGCGCAT Pnap_1407 1495231 - 1492784 - | nitrite reductase (NAD(P)H), large subunit TERM 1782 1494127 - 1494149 + g 90 -8.4 -4.82901 | GGCAGGCGCCGATCA GCTTGTCGTC CTT GATGACCAGC TTTTTATAAACGCCG TERM 1783 1495320 - 1495266 - R 100 -9.3 -5.79595 | gap 2, opp_overlap 1495314 TCGGAAAACAAAAAA GGCGTCCACACGAGACAGCAAAGGCCT GGA AAGCCTGCTC-ATC-CGTGGGGACGCC ATCGTCCTGTCTGCC Pnap_1408 1495678 - 1495430 - | hypothetical protein Pnap_1409 1495741 - 1496181 + | signal-transduction protein TERM 1784 1496594 - 1496557 - g 76 -13.4 -3.14132 | opp_overlap 1496557, overlap 1496536 GCTGTCCGGCATCAA CCAGCGCCGCCAGCCC GTCCTG GGGCTGACCACGCTGA CTGCGCTGGTGCTCT Pnap_1410 1496276 - 1498024 + | protein kinase Pnap_1411 1499413 - 1498112 - | major facilitator superfamily transporter TERM 1785 1498682 - 1498696 + g 80 -5.6 -4.72272 | opp_overlap 1498678, overlap 1498678 1498677 CGCGTAAATCAGGCT GAAGGC CCA GCCGTC TTTTTCATACAGGCA TERM 1786 1499428 - 1499400 - G 95 -2.4 -5.72254 | opp_overlap 1499400 CCAAACAAGAAAAAA CTGG-TGCCGCCCA AAA CGGGTG-CATCCAG TTTTTTTAGCGCCCT TERM 1787 1499400 - 1499428 + g 100 -3.9 -5.40474 | opp_overlap 1499400 CCAAACAAGAAAAAA CTGG-TGCCGCCC AAAAC GGGTG-CATCCAG TTTTTTTAGCGCCCT Pnap_1412 1500293 - 1499478 - | nitrate ABC transporter, ATPase subunits C and D Pnap_1413 1501257 - 1500322 - | nitrate ABC transporter, inner membrane subunit TERM 1788 1501108 - 1501124 + g 100 -13.7 -4.77986 | opp_overlap 1501104 1501105 CGCCGAAAAATCCCG CTGCGGC CGG GCCGCAG TTTTTGGGTGTTTCA Pnap_1414 1502548 - 1501304 - | twin-arginine translocation pathway signal TERM 1789 1501806 - 1501816 + g 78 -6.8 -4.60487 | overlap 1501802 1501814 GTGAACTCGGCGGTG GTGC CCA GCAC TTTTTCAGGGTGGTC TERM 1790 1502588 - 1502639 + r 100 -20.2 -4.33417 | opp_overlap 1502588 AACAAAATAAAAAAA GGCGTTCGACCCGAGCCGTCACAT GAAG ATGTGACGACAGGGTTCGAACGCC TTTGTTCTGGGTGAC TERM 1791 1502639 - 1502588 - R 100 -22.4 -6.17669 | opp_overlap 1502588 AACAAAATAAAAAAA GGCGTTCGACCCGAGCCGTCACAT GAAG ATGTGACGACAGGGTTCGAACGCC TTTGTTCTGGGTGAC TERM 1792 1502651 - 1502684 + r 81 -12.5 -3.14636 | overlap 1502649 1502647 CGCCTTTGTTCTGGG TGACATGGCGCTTCG CCGT TGAAGCACCATGTCG TGTGTTCAATTCATT Pnap_1415 1503521 - 1502889 - | response regulator receiver/ANTAR domain-containing protein TERM 1793 1503700 - 1503665 - g 100 -17.6 -3.737 | overlap 1503666 1503689 CAAGTTGCGATGAAA CCGGAGTGGCGCTGGT CGAT ACCAGCGCCAGCCCGA CTCCGTGCCTGCTCG TERM 1794 1503699 - 1503666 - g 91 -18.9 -2.83899 | overlap 1503665 1503689 AAGTTGCGATGAAAC CGGAGTGGCGCTGGT CGAT ACCAGCGCCAGCCCG ACTCCGTGCCTGCTC TERM 1795 1504324 - 1504311 - g 86 -8.1 -4.62783 | overlap 1504313 GACGCAGGCGAAAAA GCTCG GCAC CGAGC TGGAAAGCCGCAAAG TERM 1796 1504570 - 1504545 - g 72 -11.9 -3.35679 | gap 1 GTTTTGCACCGACAA CGGCG-CCATGA TCG CCATGGCCGCCG GCATGCGGCTGCAGG Pnap_1416 1503628 - 1504698 + | metalloendopeptidase glycoprotease family Pnap_1417 1504783 - 1506048 + | putative transporter signal peptide protein Pnap_1418 1506091 - 1507245 + | aspartate aminotransferase Pnap_1419 1507384 - 1507650 + | ribosomal protein S15 TERM 1797 1507699 - 1507670 - f 80 -10.7 -3.87979 | opp_overlap 1507671, overlap 1507671 TAAATCCAAAGACAA GCGCCTGAGTTAG TTCA CTAGCTCAGGCGT TTTGCACTTTAAAAC TERM 1798 1507698 - 1507671 - f 86 -14.2 -2.91703 | opp_overlap 1507671, overlap 1507670 AAATCCAAAGACAAG CGCCTGAGTTAG TTCA CTAGCTCAGGCG TTTTGCACTTTAAAA TERM 1799 1507671 - 1507698 + F 100 -16.4 -4.24002 | opp_overlap 1507671 1507670 AAATCCAAAGACAAG CGCCTGAGTTAG TTCA CTAGCTCAGGCG TTTTGCACTTTAAAA Pnap_1420 1507927 - 1510038 + | polynucleotide phosphorylase/polyadenylase Pnap_1421 1510116 - 1511102 + | alcohol dehydrogenase Pnap_1422 1511157 - 1511885 + | Triose-phosphate isomerase secG 1511919 - 1512329 + | preprotein translocase subunit SecG Pnap_1424 1512659 - 1513018 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Pnap_1425 1513058 - 1513537 + | NADH-quinone oxidoreductase, B subunit Pnap_1426 1513537 - 1514151 + | NADH (or F420H2) dehydrogenase, subunit C Pnap_1427 1514175 - 1515428 + | NADH dehydrogenase subunit D TERM 1800 1515594 - 1515583 - g 80 -5.8 -4.81249 | opp_overlap 1515583, overlap 1515576 GCCGAAAGCGAAAAA CTCG TGGC CGAG TACTTGGGCATGGCA TERM 1801 1515913 - 1515889 - g 75 -2.8 -4.90869 | overlap 1515892 1515902 ATGAGCAACGAAAAA TTAGACCAAC TCATT GATGGTCTCA AATCGGCGGAGGCTT Pnap_1428 1515433 - 1515930 + | NADH-quinone oxidoreductase, E subunit Pnap_1429 1515936 - 1517357 + | NADH-quinone oxidoreductase, F subunit TERM 1802 1518590 - 1518604 + G 76 -8.6 -4.11692 | GAGTGCTATTAATTC GGTAGT AGA ACTACC TTTTGCAGATACATG Pnap_1430 1517376 - 1519520 + | NADH dehydrogenase subunit G Pnap_1431 1519553 - 1520596 + | respiratory-chain NADH dehydrogenase, subunit 1 Pnap_1432 1520608 - 1521105 + | NADH dehydrogenase subunit I TERM 1803 1521234 - 1521246 + G 74 -2.6 -4.93296 | ACAGCTCGCAATCCG GTGC ATGCG GCGC TTTTTCTGGTACTGG TERM 1804 1521268 - 1521288 + G 83 -9.7 -4.25104 | TGGTACTGGCATTTT TTCAGGCGG CTG CCGTCTGGA TTTTGCTCAAAGCGG TERM 1805 1521289 - 1521305 + G 72 -3.7 -4.60041 | CGGCTGCCGTCTGGA TTTTGCT CAA AGCGGAA TTTTTGGCGATCACT TERM 1806 1521338 - 1521356 + G 76 -6.6 -4.41609 | GGTGCTGGTATATGT CGGCGCCG TGA TGGTGCTG TTTCTGTTTGTGGTC Pnap_1433 1521150 - 1521797 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 TERM 1807 1522008 - 1522034 + G 79 -8.7 -4.32436 | gap 1, overlap 1522009 TTCTGACCGTCGCTG CGGCCGAGTCCG CCAT CGGACT-GGCCA TTTTGGTGCTGCTGT TERM 1808 1522009 - 1522033 + G 70 -12.2 -3.18738 | gap 1, overlap 1522008 TCTGACCGTCGCTGC GGCCGAGTCCG CCAT CGGACT-GGCC ATTTTGGTGCTGCTG Pnap_1434 1521794 - 1522102 + | NADH-ubiquinone oxidoreductase, chain 4L TERM 1809 1522662 - 1522679 + G 75 -4.1 -4.77567 | gap 1, overlap 1522657 GGCTTTCCTAGTCAA CCG-GGTC GGT GACTTCGG TTTTATTCTGGGAAT TERM 1810 1523938 - 1523916 - g 71 -4.6 -4.4078 | CTGGTTCAATGAAAA CGTGCTGGCC CGT GGCATGCGCG GACTGGGAACCGTGC Pnap_1435 1522111 - 1524135 + | proton-translocating NADH-quinone oxidoreductase, chain L TERM 1811 1524190 - 1524200 + G 95 -3.2 -5.78622 | GTTGAGCCTAGCCAT TTGG ATG CCGA TTTTTTTTGGCGTCG TERM 1812 1524484 - 1524510 + G 84 -3.7 -5.1861 | gap 1, opp_overlap 1524480 CTGGGAATCGATCAC GACGCGCGTGAA CCAG TACATG-GCGTC TTTTTTGATCCTGAG Pnap_1436 1524167 - 1525642 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 1813 1525950 - 1525985 + G 72 -4.5 -4.59773 | overlap 1525952 GTCTATGGCCGGCCT TACGCCGCTGACCGG GACATG CTGCGCGGCGGCGAA TTTTTCACGCTCAGC TERM 1814 1526576 - 1526594 + G 80 -6 -4.77438 | overlap 1526566 1526578 CATGCTGGCGTTTTC GACCATTT CGC AAATGGGC TTTTTGCTGCTCGGT TERM 1815 1526900 - 1526928 + G 72 -3.8 -4.66953 | gap 1, opp_overlap 1526915, overlap 1526901 AGCCCTGATTTCGTC GGGCCAG-ACAAG CTAC CTGGTGCTGGCCG TTTTTGCCGTGTTCA Pnap_1437 1525662 - 1527164 + | NADH dehydrogenase subunit N Pnap_1438 1527167 - 1527469 + | putative transmembrane protein Pnap_1439 1527466 - 1528080 + | NUDIX hydrolase TERM 1816 1528404 - 1528419 + G 78 -4.6 -4.68424 | opp_overlap 1528401, overlap 1528402 GGACAGACTCAATCC TGCCGC ACAG GCTGCA TTTTTAACTGCCTTG Pnap_1440 1528102 - 1528629 + | hypothetical protein Pnap_1441 1530020 - 1528701 - | Glu/Leu/Phe/Val dehydrogenase, C terminal TERM 1817 1529639 - 1529667 + g 86 -6.6 -5.0133 | GAATGCCGCCTTTGG CGCCGCCGTAAG GCACG TTGACGGCTGCG TTTTTTACCGACATC Pnap_1442 1531972 - 1530152 - | ABC transporter related Pnap_1443 1532051 - 1532587 + | MarR family transcriptional regulator TERM 1818 1532838 - 1532812 - g 81 -15.9 -3.08679 | gap 1, opp_overlap 1532818 1532819, overlap 1532779 CGCTGGGATTGAACA CGGCCACC-GCG CCAG CGCCGGTGGCCG CCGAATGGTGGCGCG TERM 1819 1532949 - 1532919 - g 73 -11.1 -3.57263 | overlap 1532902 AGCCCCAGCCTGAAA CTTGCGCAGGCAC GGCTG GCGCGCGCGCAAG CCGCCACCGATGTGG Pnap_1444 1532655 - 1534169 + | RND efflux system outer membrane lipoprotein TERM 1820 1534215 - 1534201 - f 72 -11.4 -3.10975 | ACCCATCACTGAACA GCGCAG TGC CTGCGC AAGCCATTTCCAACA Pnap_1445 1534247 - 1535581 + | secretion protein HlyD family protein TERM 1821 1536770 - 1536786 + G 72 -2.2 -4.72986 | gap 1, overlap 1536764 1536766 CGACGCTGATCCAGG GCGTGGC CATG GCC-TGC TTTTTCATCCCGCTG TERM 1822 1537036 - 1536989 - g 71 -12.6 -3.01712 | gap 1, opp_overlap 1536979 GCGTCGCCGCCAACA GCGCCTTGTCCGGCCT-GGCCAG TGC CGGGCTGACGCCGGACCAAGCGC TGGGAAGCATCAATC Pnap_1446 1535629 - 1537203 + | EmrB/QacA family drug resistance transporter Pnap_1447 1538331 - 1537321 - | luciferase family protein TERM 1823 1538279 - 1538238 - G 73 -10.7 -3.64703 | gap 1 CGGTGCGCAGCGAAA TCGCCA-GCGCGTCGGCGAC CGT GCCGCCTTCGCGCACCGCGA CCAGATCGAGCATGG TERM 1824 1538377 - 1538418 + r 100 -11.5 -4.68645 | gap 1, opp_overlap 1538396 GTACGGGCATGGCCA CTGCGTCGCC-GGGTGGAAA GCC TTGCCGCGCAGGCGTCGCAG TTTTCGTTTTCCCTG Pnap_1448 1539428 - 1538469 - | MerR family transcriptional regulator TERM 1825 1539371 - 1539396 + g 71 -5.5 -4.27316 | gap 1 TGGACAGCCCGGTGT CTCTTTCCACCG CTG CGATGGAAA-AG TTTTGCGTTGGCACG TERM 1826 1539631 - 1539643 + H 89 -3.3 -5.4505 | TTCCGTTTGCTCCCG GATGC TTC GCAAC TTTTTTCTTCCCGGC TERM 1827 1540380 - 1540359 - g 76 -7.3 -4.3898 | gap 1, overlap 1540361 ACTACGTCGAGAAAA TCGTCGCGCG CAT CGCG-GACAA GCGCCTGAACACCCC Pnap_1449 1539680 - 1540984 + | amine oxidase Pnap_1450 1540981 - 1541766 + | hypothetical protein Pnap_1451 1541800 - 1543032 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 1828 1543131 - 1543114 - g 71 -8.4 -3.86897 | CGCAGCCGGCAGAAA CCGGCA CGCCTC TGCCGG GCATGCAACTGGCCG Pnap_1452 1543029 - 1543583 + | hypothetical protein TERM 1829 1543974 - 1543986 + G 81 -2.6 -5.1861 | overlap 1543963 CGGGCGCGCTCATTG CCTG GGCAG CGGG TTTTTTGCTGATCGC TERM 1830 1544348 - 1544366 + G 100 -6.6 -5.63103 | overlap 1544351 GGCATCGCCAGTGCC GTGCCGGC CAC GCTGGTGC TTTTTTTCATTCAGG Pnap_1453 1543580 - 1544938 + | major facilitator superfamily transporter Pnap_1454 1544935 - 1545471 + | putative lipoprotein Pnap_1455 1545476 - 1546258 + | short-chain dehydrogenase/reductase SDR Pnap_1456 1546262 - 1546714 + | hypothetical protein TERM 1831 1547245 - 1547272 + G 71 -6.2 -4.34402 | CAAAAGCCTATGAGG CTTTGCTGGGCC GGCT GGGCCAGAAAGG TTTTGATCTCCAGAA Pnap_1457 1546740 - 1547312 + | Lipocalin family protein Pnap_1458 1548558 - 1547440 - | secreted hydrolase-like protein TERM 1832 1547946 - 1547973 + g 83 -4.8 -5.06414 | overlap 1547939 1547948 CTGTTGCTGCCAGTT GAGGCTGGCTGT AGTA ATAGCTGGCCTG TTTTTCTTCAGGGCC TERM 1833 1547948 - 1547971 + g 72 -7.4 -4.16307 | overlap 1547939 1547946 GTTGCTGCCAGTTGA GGCTGGCTGT AGTA ATAGCTGGCC TGTTTTTCTTCAGGG TERM 1834 1548182 - 1548198 + g 81 -4.3 -5.0538 | overlap 1548184 CCGGCGCGGGCGATG CGCTGGT CGT GCCAGAG TTTTTTACCCTGCAC Pnap_1459 1549018 - 1548560 - | hypothetical protein Pnap_1460 1549563 - 1549027 - | GCN5-related N-acetyltransferase Pnap_1461 1549769 - 1550044 + | ribosomal protein S16 TERM 1835 1550251 - 1550265 + G 78 -3.4 -5.00616 | CTGACGTCAAGTTTC GGCCGG GTT TCAGCC TTTTTTCGGGGACGG Pnap_1462 1550061 - 1550669 + | 16S rRNA processing protein RimM TERM 1836 1550979 - 1551001 + G 76 -6.2 -4.61482 | overlap 1550978 TGACCGCGCCGCTTG CGGTGCGC CTGACGC GCCCACCG TTCTTTTTTCCCCGG Pnap_1463 1550737 - 1551519 + | tRNA (guanine-N1)-methyltransferase TERM 1837 1551675 - 1551651 - f 78 -5.7 -4.71061 | overlap 1551659 AGTTAGATGGAAAAA TCATGAATCTG ATC CAGACCCTTGA GCAGGAAGAAATTGC TERM 1838 1552031 - 1551998 - g 75 -3 -4.90266 | gap 1, overlap 1551999 1552000 CGTATCAAGGAAAAA CTGGGCGTCAAGGCT GTCAA AGCCGTGCAGCCC-G TACAGGCTGCGTAAA rplS 1551653 - 1552045 + | 50S ribosomal protein L19 TERM 1839 1552068 - 1552085 + F 100 -12.7 -5.22794 | opp_overlap 1552068 TGTTGCCCTTGAAAA GCCGCTC CACC GAGCGGC TTTTTTCGTGCTTGT TERM 1840 1552085 - 1552068 - f 95 -12.7 -4.07568 | opp_overlap 1552068 TGTTGCCCTTGAAAA GCCGCTC CACC GAGCGGC TTTTTTCGTGCTTGT Pnap_1465 1552115 - 1552828 + | NUDIX hydrolase TERM 1841 1553802 - 1553859 + G 70 -11.7 -3.11192 | opp_overlap 1553802 TCATCACGGCATCAA CGCCAGGCCGTGAGCCCGAGGTGGCGC ACCT GCGCAGCGTCGTGGGCCTGGTCTGGCG TTCGGTGGTGCTGTG Pnap_1466 1552901 - 1553920 + | hypothetical protein Pnap_1467 1554854 - 1553946 - | ribosome small subunit-dependent GTPase A TERM 1842 1554404 - 1554424 + g 76 -8.9 -4.20696 | CTGCGGTCTGACCAT CGTTTGCCG GGG CGGCAGCCG TTTTGGGCTTGATCG TERM 1843 1554478 - 1554520 + g 78 -6.3 -4.63218 | gap 2, overlap 1554491 1554492 1554494 ATGGCGCGGTAGGGC GCGAGCTTGGTCCAGGCCC GGCCGAA GGGCTCGG-CCAGG-TCGC TTTTGTTCAGCGCAA Pnap_1468 1555234 - 1554914 - | transcriptional coactivator/pterin dehydratase TERM 1844 1555069 - 1555091 + g 70 -12.8 -2.94759 | overlap 1555067 TGAAGGCCACTGCAT TCACGAAACC GAT GGTTTCGTGG TAATTCTTGAACTTG Pnap_1469 1556520 - 1555231 - | Ste24 endopeptidase TERM 1845 1556421 - 1556390 - G 86 -11.6 -4.18197 | gap 1, opp_overlap 1556415 ATGGTGGATGCAAAA GCGGCG-GGCACC TGGTTGC GGTGCCGCGCCAC ATGGCGAATTTGCCG TERM 1846 1556611 - 1556586 - g 83 -5.4 -5.08824 | overlap 1556587 CCCTTACTTAAAAAA TCCGACCAGA ACCTGG TCTGGCTGGA CTGCGAAATGACCGG Pnap_1470 1556556 - 1557119 + | oligoribonuclease Pnap_1471 1557514 - 1559463 + | DEAD/DEAH box helicase domain-containing protein TERM 1847 1559536 - 1559506 - T 100 -20.5 -5.15969 | opp_overlap 1559506 CCTCAAGCTAAAAAA GCCGCTGCAACCC ATCAA GGGCTGCAGCGGC TTTTTCTTTGGGCGA TERM 1848 1559506 - 1559536 + T 100 -18.3 -5.27335 | opp_overlap 1559506 CCTCAAGCTAAAAAA GCCGCTGCAACCC ATCAA GGGCTGCAGCGGC TTTTTCTTTGGGCGA Pnap_1472 1560536 - 1559559 - | guanosine 5'-monophosphate oxidoreductase TERM 1849 1560668 - 1560645 - R 100 -8.8 -5.64274 | GCACCCACAAAAAAA CCGGGCGCAA TTGC TTGGACCCGG TGACTGATTCTAGGG Pnap_1473 1561408 - 1560737 - | hypothetical protein TERM 1850 1560824 - 1560775 - G 80 -14.4 -3.13403 | gap 3, opp_overlap 1560805 1560807, overlap 1560773 GCGCCGCCAGCAAGA CCCGG-CC-C-TGCGCATCCTCGAC CCA GCCGATGACGCGCAGGCGGTCCGGG CTGGCCGCCGGCGCG TERM 1851 1560807 - 1560840 + g 73 -13 -3.13403 | opp_overlap 1560773 1560775, overlap 1560805 1560839 TCGACCCAGCCGATG ACGCGCAGGCGGTC CGGGCT GGCCGCCGGCGCGA TGTTCATCGAACGGC TERM 1852 1561116 - 1561149 + g 90 -2.3 -5.41746 | overlap 1561093 1561091 TGGATGCCCTTGATG GCATGCCGGGC CGTCGTGGTTTT GACCGGCACGC TTTTTTTCAGCGCTT TERM 1853 1562602 - 1562576 - g 76 -10.1 -3.91911 | opp_overlap 1562565, overlap 1562577 1562598 CTGAGCGCAAGGAAA TCGCGCTGCTG TACCG CAGCAACGCGC AAAGCCGGGTGATGG TERM 1854 1562601 - 1562577 - g 74 -13.6 -2.94825 | opp_overlap 1562565, overlap 1562576 1562598 TGAGCGCAAGGAAAT CGCGCTGCTG TACCG CAGCAACGCG CAAAGCCGGGTGATG TERM 1855 1563693 - 1563679 - g 72 -7.8 -4.1899 | GGATTTCATTCAAAA TCCGGC AGT GCCGAA CGCTTTGCCAGCCCG Pnap_1474 1561555 - 1563900 + | UvrD/REP helicase Pnap_1475 1564708 - 1563917 - | hypothetical protein Pnap_1476 1565698 - 1564748 - | homoserine kinase TERM 1856 1565659 - 1565648 - G 73 -3.6 -4.81249 | overlap 1565657 1565658 CCCCAAATTCAAAAA GCGC AAGA ACGC TGCAGCCTCGTCAAA Pnap_1477 1566133 - 1565735 - | hypothetical protein TERM 1857 1565811 - 1565847 + g 72 -8 -4.16943 | overlap 1565783 GCCGCGCCGCGTGCG CCTTCGGC-CGGCTTGAC TTC GT-AAGCCGCGCCGCCGG TTTTGGGCTGTACCG TERM 1858 1565950 - 1565969 + g 74 -4.8 -4.62069 | overlap 1565947 CGATCTTCTTGTCCG GCCGCGCG GGAC CGACCGGC TTTTTCGCCTGCGCC TERM 1859 1565975 - 1566009 + g 73 -11.2 -3.55444 | ACCGACCGGCTTTTT CGCCTGCGCCGGGGTC GCG GAACCGGGCGCCGACG TTTGAGCCATGGCCG TERM 1860 1567683 - 1567652 - g 73 -12.8 -3.21912 | GCTCGAAGTGACCAA GCCGCACGGGCTGG CCAG CCTGGCCGAGCGGC ATGTGGGGCGCAGCG TERM 1861 1568103 - 1568092 - g 83 -7.2 -4.63486 | overlap 1568093 1568094 AGGTGGTCAAGAAAA CGCC CAGC GGCG CGCGCAGCACCGACG TERM 1862 1568645 - 1568633 - g 70 -10.5 -3.54408 | opp_overlap 1568637, overlap 1568629 GGGGATTGAAACCAA GGCGG CGG CCGCC TACATCGACCGCTAT Pnap_1478 1566249 - 1569074 + | DNA polymerase I Pnap_1479 1569568 - 1569092 - | integral membrane protein-like protein TERM 1863 1569149 - 1569131 - G 72 -2.3 -4.78107 | overlap 1569133 1569134 1569136 CACCATCAGGAAAAA CACCACC GCCAT GGCAGCG AAGGCTGGGTAGCCG TERM 1864 1569509 - 1569491 - G 86 -8 -4.74989 | overlap 1569493 AAAGAACATATAAAA CGCCGACC CCA GGCCGGTG CCGACCATCAGCACG Pnap_1480 1569951 - 1569565 - | NAD-dependent epimerase/dehydratase Pnap_1481 1570865 - 1569948 - | NAD-dependent epimerase/dehydratase TERM 1865 1570897 - 1570954 + r 74 -10.4 -3.53091 | gap 2, opp_overlap 1570887, overlap 1570898 AGTTACAGGCGGCAG GCGTCGCCGGCCTTGC-ACTGCCTG-GC TTGT GCGCGGGCGGCCGCACGGCGGGCGGCGG TTTCAAAGGCCAGCT TERM 1866 1570898 - 1570953 + r 79 -13.9 -2.71712 | gap 2, opp_overlap 1570887, overlap 1570897 GTTACAGGCGGCAGG CGTCGCCGGCCTTGC-ACTGCCTG-GC TTGT GCGCGGGCGGCCGCACGGCGGGCGGCG GTTTCAAAGGCCAGC Pnap_1482 1571396 - 1570884 - | putative thiol-disulphide oxidoreductase DCC TERM 1867 1571462 - 1571448 - R 100 -11.4 -5.51165 | AAAAGTTTAAAAAAA GCCAGC CCG GCTGGC TTAAAAGGTTGGAGG Pnap_1483 1571987 - 1571463 - | putative transcriptional regulator TERM 1868 1572222 - 1572191 - H 100 -18.1 -3.47804 | opp_overlap 1572191, overlap 1572180 AGAAGGTAGAAGGAA CCCCGGTTTCGGC TGCCAT GCCAAAACCGGGG TTTTTCTGGAATTTC TERM 1869 1572191 - 1572222 + H 100 -15.9 -4.89393 | opp_overlap 1572191 1572180 AGAAGGTAGAAGGAA CCCCGGTTTCGGC TGCCAT GCCAAAACCGGGG TTTTTCTGGAATTTC TERM 1870 1572878 - 1572932 + G 75 -4.4 -4.81083 | gap 3, overlap 1572881 1572892 1572899 CGCCGTCACCGCCCT GGGCGGCGTGGTCGGCTATGC-GCTGG TGGA CCAGCTGTATGGCT-ACT-TGCCGTTC TTTTTGATCATTGCC TERM 1871 1572881 - 1572929 + G 71 -4.7 -4.50218 | gap 3, overlap 1572878 1572892 1572899 CGTCACCGCCCTGGG CGGCGTGGTCGGCTATGC-GCTGG TGGA CCAGCTGTATGGCT-ACT-TGCCG TTCTTTTTGATCATT TERM 1872 1573030 - 1573002 - g 76 -5.9 -4.59773 | overlap 1573003 1573021 CCGCAGCTGCAAAAA CGCGCCACCCT GCAGGAA ACGGCGGCGCA GATTGCGTGGCTGGC Pnap_1484 1572285 - 1573100 + | zinc/iron permease Pnap_1485 1574499 - 1573501 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 1873 1574292 - 1574310 + g 70 -11.7 -3.22894 | TCACCTTCAATCGCG GCGCTGC GGCCA GCAGCGC TTCATCAATCTTGTA Pnap_1486 1575449 - 1574502 - | ribokinase-like domain-containing protein Pnap_1487 1576261 - 1575446 - | xylose isomerase domain-containing protein TERM 1874 1575827 - 1575794 - G 77 -2.4 -5.00616 | gap 3, opp_overlap 1575805 1575807 1575809 1575814, overlap 1575795 1575796 GGCCGTGTCAAAAAA GTCCTGCAGCGCGGGCA GGG TGCC-G-GCCGCCGG-C GTCTGGTCGTTTTCG TERM 1875 1575805 - 1575836 + g 72 -7.2 -4.18197 | gap 1, opp_overlap 1575796 1575794 1575795, overlap 1575807 1575809 1575814 AAAAGTCCTGCAGCG CGGGCAGGGTGCCGG CCG CCGGCGTC-TGGTCG TTTTCGATCACGAGT Pnap_1488 1577048 - 1576251 - | ABC transporter related Pnap_1489 1577887 - 1577081 - | extracellular solute-binding protein Pnap_1490 1579148 - 1577946 - | hypothetical protein TERM 1876 1578117 - 1578134 + g 86 -8.3 -4.57341 | overlap 1578124 CCCTTGTCCGGCTTC GCCCGCC GGAA GGCTGGC TTTTTCCACCAGCTT Pnap_1491 1579858 - 1579205 - | polar amino acid ABC transporter, inner membrane subunit TERM 1877 1579504 - 1579466 - G 76 -9.7 -3.99324 | gap 1, overlap 1579489 CGGCAGGATGACAAA GCGCATGCGC-GAG AAGTAGGACAGG CTCAGCGCATGCGC CGCCTCGACCTGGCC Pnap_1492 1580529 - 1579858 - | polar amino acid ABC transporter, inner membrane subunit Pnap_1493 1581821 - 1580691 - | regulatory protein, LacI TERM 1878 1581462 - 1581479 + g 74 -4.7 -4.56597 | opp_overlap 1581462 CAGCATCAGCAAATA GCCGGCT TGCT GGCAGGC TTTTTCGGCGCCGCG TERM 1879 1582895 - 1582925 + r 81 -12.7 -3.06831 | opp_overlap 1582902, overlap 1582902 ATGGCTGAAGCGTTG AAAAAAAGGGCGC TGGAT GCGCCCTTTTTTA TTGACTCGACCTTGG TERM 1880 1582902 - 1582918 + r 100 -10.8 -5.4833 | opp_overlap 1582902, overlap 1582895 AAGCGTTGAAAAAAA GGGCGC TGGAT GCGCCC TTTTTTATTGACTCG TERM 1881 1582918 - 1582902 - R 100 -10.8 -5.41746 | opp_overlap 1582895 1582902 AAGCGTTGAAAAAAA GGGCGC TGGAT GCGCCC TTTTTTATTGACTCG Pnap_1494 1583179 - 1582943 - | hypothetical protein TERM 1882 1583099 - 1583122 + g 80 -5.2 -4.8622 | overlap 1583100 CTCGGGATTCATGGC CGCAAAACCG CGTT CGGATTTGCC TTTTTGATTGCCGCC Pnap_1495 1583705 - 1583442 - | hypothetical protein TERM 1883 1583618 - 1583605 - G 77 -2.3 -5.08824 | GCTGGATGCAAAAAA GCCGC GGAC ACGAC CAGCACCACGCCCGG Pnap_1496 1584646 - 1583744 - | 3-mercaptopyruvate sulfurtransferase TERM 1884 1584226 - 1584245 + g 73 -7 -4.25104 | GCCAGGCCTGCAGCC CGCCGTCG AGCA CGGCGACG TTTTCATGCCCCGCC Pnap_1497 1585571 - 1584669 - | putative transmembrane protein TERM 1885 1585196 - 1585180 - G 83 -12.3 -4.08945 | opp_overlap 1585194 ACCACGCCGGCAAAA CTGGCCA GGA TGGCCAG CACCAGCGGACCCTG TERM 1886 1585491 - 1585473 - G 78 -10.3 -4.07885 | CACGCCCCGGTAAAA CACCAGC TCGGC GCTGGTG AAGTGGGCGGAGGCG TERM 1887 1585613 - 1585629 + r 84 -13.7 -3.0976 | opp_overlap 1585605, overlap 1585605 TAAAAAGGCCTTTTG CGCAGGC AGG GCCTGCG TATTCAGCTATTGAA TERM 1888 1585674 - 1585694 + r 86 -9.7 -4.25104 | GGCAGCGAGGACCGT CCCCTCAGA TCA TCTGAGTGG TTTTGCTGGCGCCCA Pnap_1498 1586796 - 1585678 - | Rieske (2Fe-2S) domain-containing protein TERM 1889 1586352 - 1586371 + g 89 -16.4 -3.40403 | CCAGGCCGGCCATGT CGGCCGCG ATGT CGCGGCCG TTGTCCTCGAACACC TERM 1890 1586933 - 1586919 - H 79 -2.7 -5.1675 | GTATCCATCAAAAAA CGGTG AAAAA CGCCG ACATGAGAACGGTTA Pnap_1499 1587084 - 1587365 + | exodeoxyribonuclease VII, small subunit TERM 1891 1587793 - 1587820 + G 70 -9.8 -3.62096 | gap 1 GGCGCAGGCGCTGCT GGCCGGCG-ATGC GCT GCAGGCGCTGGCC TTTGAACTGCTCACG Pnap_1500 1587362 - 1588345 + | polyprenyl synthetase TERM 1892 1588803 - 1588793 - g 76 -8.2 -4.1466 | overlap 1588794 ATTCAAGGGCGAAAA CCGC AAT GCGG TGGCCGTCATCGGCG TERM 1893 1589181 - 1589207 + G 86 -7.3 -4.7173 | gap 2, opp_overlap 1589171 1589174 GAAAACATCCGGCAC CTGATGGCCACCG GCG CGG-GGCCG-CAG TTTTTGCATGTCGTG Pnap_1501 1588383 - 1590293 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 1894 1590269 - 1590320 + F 74 -7.2 -4.14392 | gap 1, overlap 1590278 1590280 CGATCCGCTGGCCAA GGTCATGCT-CAAGTCGGTGGCCTG AGC CGGTCCACCGGCCTGTGGTGTGAAC TTTTCCAGCTTGCGC TERM 1895 1590278 - 1590310 + F 72 -11.9 -2.66481 | overlap 1590269 1590280 GGCCAAGGTCATGCT CAAGTCGGTGGCCTG AGC CGGTCCACCGGCCTG TGGTGTGAACTTTTC TERM 1896 1590488 - 1590472 - g 93 -9.3 -4.75372 | opp_overlap 1590474, overlap 1590474 ATCACTCATCAAAAA CGCCGGC ATT GCCGGTG TGCTGGCTGCCGGCA TERM 1897 1590546 - 1590578 + G 78 -6.3 -4.59773 | overlap 1590537 1590577 CTGTCCGCTGGCGCC TGGCGTCGAGC TTTCCAAAATC GCTCGACACCA TTTTTGGCAGTGCCG Pnap_1502 1590446 - 1591528 + | TRAP dicarboxylate transporter- DctP subunit TERM 1898 1591542 - 1591577 + T 78 -6.2 -4.7373 | gap 1, opp_overlap 1591542 1591540 1591544, overlap 1591544 AAACTATAAAAATGA TAGCTGCCTGCGCAT ACGGGAC GTGCGCAGG-AGCCA TTTTTCATCAAATAA Pnap_1503 1593397 - 1591595 - | TRAP dicarboxylate transporter, DctM subunit TERM 1899 1592206 - 1592178 - G 84 -8.7 -4.49311 | ACCACGATCAGAAAA CCGATCTGCCCGC CGG GCAGGCTGGTCAG CAAATGCTCGACCCA TERM 1900 1592522 - 1592477 - G 73 -8.3 -4.02022 | opp_overlap 1592477 1592509 CGGAATCAGCACAAA GGTCACGCG-CTCGGCCATGC GCGACA GCA-GGCCAAGGCGCGTCGCC TTGTTGATGACCGCC TERM 1901 1592509 - 1592525 + g 70 -12.3 -3.14344 | opp_overlap 1592477, overlap 1592477 TGCGCGACAGCAGGC CAAGGCG CGT CGCCTTG TTGATGACCGCCATC TERM 1902 1593327 - 1593295 - G 80 -6.1 -4.68103 | overlap 1593297 CGAAGCCGAAGAAAA TGCCGCAGGCGCCCA GGC TGAACGCCACCGGAA AGCCCATCAGCAAAA TERM 1903 1593413 - 1593426 + r 71 -4.5 -4.65895 | overlap 1593414 ATTGTTCTCCGGGGA TCAGC GGGC GCTGG TTTTTGACTCGGCGA Pnap_1504 1594012 - 1593413 - | tripartite ATP-independent periplasmic transporter DctQ TERM 1904 1594049 - 1594082 + r 79 -13.9 -2.73681 | opp_overlap 1594037 1594048 1594047, overlap 1594048 ACATGCGCACAAATC TCGTCCGCAGGAC AGGGTTGG GTCCAGCGGACGA TGCTTGGCGTGAGTG Pnap_1505 1595282 - 1594200 - | selenophosphate synthetase TERM 1905 1594249 - 1594267 + g 70 -8 -4.07568 | TCGCCAATCTGGCGC GCCGCGTC AAA GCCGTGGC TTTTAAAACAGGCCA Pnap_1506 1595444 - 1596745 + | hypothetical protein TERM 1906 1596798 - 1596821 + F 86 -6.6 -4.99947 | overlap 1596800 GTGGTTGGGCTGGCC GGGAATCGCC CGGC GGCGACTCAC TTTTCTTTGCTTCGC TERM 1907 1596881 - 1596860 - f 72 -3.7 -4.78981 | gap 1, overlap 1596861 AGTAAGCAAAAGAAA GGCGACCC GCAGTCT GGGTC-CC TGCGCTTCGCTACGG TERM 1908 1596931 - 1596920 - f 74 -7.2 -4.12188 | overlap 1596921 TGATGACCGGCAAAA GCGG GGGT CCGC GCAAACTCGCCTGCG TERM 1909 1597092 - 1597071 - g 88 -7.3 -4.83169 | gap 1, overlap 1597073 ATTTGTGCATAAAAA GTGCC-CCTG GCG CAGGTAGCAC CTGCGCAACCAGCTA TERM 1910 1597319 - 1597341 + G 82 -5.5 -4.9448 | gap 1, opp_overlap 1597319, overlap 1597319 1597336 CCGTAGCGAAGCGAA GG-GACCCAG ACAG CCGGGTCGCC TTTTCTTTGGTGACT Pnap_1507 1597071 - 1597538 + | hypothetical protein Pnap_1508 1598617 - 1597490 - | molybdate metabolism transcriptional regulator TERM 1911 1597969 - 1597985 + g 74 -5.1 -4.57073 | CATCAGCCAGTCCTT CAATCTG CAG CGGGTTG TTTTTGGCAACGATC Pnap_1509 1598756 - 1599520 + | binding-protein-dependent transport systems inner membrane component Pnap_1510 1599517 - 1600206 + | ABC transporter related TERM 1912 1600380 - 1600370 - g 72 -2.4 -4.74103 | GCCCGAATTCAAAAA GGCC AGC GGCA TCGACGTGAAAGTGG TERM 1913 1600517 - 1600485 - g 72 -2.5 -4.72272 | overlap 1600486 GTGGCCGAGGAAAAA GTCGTGGCCGAAGGC TTC GCCCTCAAGCGCTAC CCGGTGATGTACAAC TERM 1914 1600622 - 1600608 - g 81 -4.2 -5.03145 | opp_overlap 1600614, overlap 1600610 1600612 GAAGCGCTGAAAAAA GTCAGC GCC GCCAAC GCCGGCTTCATTTCG TERM 1915 1600709 - 1600688 - g 74 -5 -4.62069 | opp_overlap 1600689, overlap 1600689 GCGCTACTGGAAAAA TGCCGGCG TCGAGC CACCGGCT TTTGCGGGCTACAAG TERM 1916 1600994 - 1601006 + G 77 -2.6 -5.00884 | overlap 1601003 CGGCTACCAGATCAA CGGC GAGCA GCTG TTTTTTCCCAACGCT Pnap_1511 1600203 - 1601030 + | hypothetical protein TERM 1917 1601438 - 1601451 + G 73 -3.1 -4.8048 | gap 1, opp_overlap 1601418, overlap 1601438 GGCTGCCTTTCAGCC GTG-GG CCG CCGCAC TTTTTGATCTGAACC Pnap_1512 1601155 - 1601463 + | hypothetical protein TERM 1918 1601489 - 1601517 + F 87 -8 -4.56093 | overlap 1601490 CCGAGGCTAAGGGCT TGCGTGCTGACC GATGG GGTCTGCGCGCC TTTTATCGTTCCGTT TERM 1919 1601490 - 1601516 + F 75 -11.5 -3.32572 | overlap 1601489 CGAGGCTAAGGGCTT GCGTGCTGACC GATGG GGTCTGCGCGC CTTTTATCGTTCCGT TERM 1920 1601586 - 1601573 - g 75 -3.1 -4.8543 | gap 1, opp_overlap 1601573 1601580 CAATCGCTACAAAAA GCATGG CTG CC-TGC GCACTCTGCGTGCTG Pnap_1513 1601548 - 1602138 + | nuclear export factor GLE1 TERM 1921 1602146 - 1602166 + F 100 -14.7 -4.5366 | AACACTGAGCACCGC GCCGGCGTG ACG CATGCCGGC TTTTGACTTTTTTAA Pnap_1514 1602203 - 1602700 + | hypothetical protein TERM 1922 1603335 - 1603323 - g 80 -4.7 -4.82901 | GGCCTTCGAGAAAAA CTGCG ATC CGCTG GCCGGCAAATATTCG Pnap_1515 1602898 - 1603428 + | hemerythrin HHE cation binding region Pnap_1516 1603867 - 1603481 - | CrcB protein TERM 1923 1603915 - 1603942 + H 83 -14.8 -2.78384 | opp_overlap 1603897 GCCATGACTTTAACC GCGCAGCCCGGG CTGG TCCTGGCTGCGC TGTCCTGAAAGGCAA TERM 1924 1606445 - 1606475 + G 100 -16.8 -4.07885 | CCACCATGCCGACAT CGGCGGCATCACGC CGG GCTCGATGCCGCCG TTTTCCACCCGCATC TERM 1925 1606851 - 1606799 - g 72 -11.9 -3.28712 | gap 1, overlap 1606841 CTTGCTGCTCGACAA CGGCGC-GCGGATCAGCGTGGCGA TTCGCG TCGATACGCAAAACCGCAGCGCCG AGATCGACTTCACCG Pnap_1517 1603962 - 1607624 + | 5-oxoprolinase (ATP-hydrolyzing) Pnap_1518 1607645 - 1608493 + | hypothetical protein Pnap_1519 1608942 - 1608571 - | monovalent cation/proton antiporter, MnhG/PhaG subunit TERM 1926 1608744 - 1608726 - G 72 -3.7 -4.63527 | TCAGCAGCGGAAAAA CGGCCAG CTCAC CCTGCCG GAGCGAGAAAAAAAG TERM 1927 1608880 - 1608832 - G 76 -5.7 -4.57073 | gap 1, overlap 1608834 1608850 1608859 CACGCGCTCGAAAAA CGTCGG-CAGGCGCAGCAAGCC GAACGA GCCCAGCAGCGCCAGTCCGGCG CCCGCCAGCACCAGC Pnap_1520 1609217 - 1608939 - | multiple resistance and pH regulation protein F Pnap_1521 1609705 - 1609214 - | putative monovalent cation/H+ antiporter subunit E TERM 1928 1609453 - 1609428 - G 71 -5.9 -4.38712 | GGCACCTGCACAAAA CCGGGCGGATG GCGC CGGCTGCCCGG CCTGAGCAGCAAACC TERM 1929 1609689 - 1609664 - G 76 -13.9 -3.25223 | opp_overlap 1609660, overlap 1609666 CAGCCACAGCACGAA CAGCGCCGCCG ACAG CAGCGGCGCGG GCAGGATTTTTTTCA TERM 1930 1609687 - 1609666 - G 83 -15.1 -3.18849 | opp_overlap 1609660, overlap 1609664 GCCACAGCACGAACA GCGCCGCCG ACAG CAGCGGCGC GGGCAGGATTTTTTT Pnap_1522 1611423 - 1609702 - | putative monovalent cation/H+ antiporter subunit D TERM 1931 1610298 - 1610282 - G 71 -10.8 -3.53012 | opp_overlap 1610281, overlap 1610260 TCGTCGTCGGCGAAA GGCGCC TGGCT GGCGCC GTCATTGCGCCAGCG TERM 1932 1610666 - 1610640 - G 75 -13.6 -3.04792 | TCATGAGGGCGAACA GCGCGCCGACCG GCG CCGTCGCCGCGC TGTAGGCCGGCACCA TERM 1933 1610749 - 1610736 - G 73 -8.1 -4.07687 | overlap 1610723 1610737 AGGCCGTGGCCAAAA TGCCG GCGG CGGCA TGCAGCAGGCCCCGG Pnap_1523 1611791 - 1611420 - | putative monovalent cation/H+ antiporter subunit C Pnap_1524 1614736 - 1611791 - | putative monovalent cation/H+ antiporter subunit A TERM 1934 1613249 - 1613223 - G 84 -3.7 -5.14965 | gap 2, overlap 1613225 ATGCTCATCAAAAAA GGCGTGTTCAGGC CAT GCCAGA-CA-GCC AGGCTGAACTCGGGC TERM 1935 1613606 - 1613576 - G 80 -5.2 -4.82901 | overlap 1613578 TTCCTTGGACAAAAA GCCGTTGAGCAGCG GCA CGCCGGCCATCGCC GCGCTGGCCACCATG TERM 1936 1614451 - 1614413 - G 81 -2.3 -5.23016 | gap 2, opp_overlap 1614424, overlap 1614415 AAAGAAGGCAAAAAA GCGCGGCAC--CGGGTCGC TGG GCGACATGTAGTAGCGCGC ATACAGCACCACCAG TERM 1937 1614963 - 1614907 - R 95 -14.6 -3.54919 | gap 2, opp_overlap 1614925, overlap 1614925 1614961 AATGATGGTCTGAAA GGGACGC-GCCATGA-AAAATGCCGGAC TGA ATCCGGCATTTCATCAAGGCAGCAACCC GGGTCAGGCGCCGAA TERM 1938 1614925 - 1614943 + r 76 -10.3 -3.72576 | opp_overlap 1614925 1614907 ACGCGCCATGAAAAA TGCCGGA CTGAA TCCGGCA TTTCATCAAGGCAGC TERM 1939 1614943 - 1614925 - R 100 -11 -4.7254 | opp_overlap 1614925, overlap 1614907 ACGCGCCATGAAAAA TGCCGGAC TGA ATCCGGCA TTTCATCAAGGCAGC Pnap_1525 1616109 - 1614967 - | chaperone protein DnaJ TERM 1940 1615016 - 1615035 + g 93 -7.8 -5.15634 | gap 1, overlap 1615009 CAGCCTTCTTCGCTG GGCGAGTGC TTG GCGC-CGCC TTTTTTGATCGACTC TERM 1941 1615858 - 1615815 - G 100 -13.8 -4.61633 | overlap 1615816 ACACATCGCCAAAAA TGTCGCCGAAGGCCTCGGCA AAAC CGCCAAAGCCTTCAGCGCCC GGACCGCCGCCCCGG TERM 1942 1615857 - 1615816 - G 91 -17.3 -3.36256 | overlap 1615815 CACATCGCCAAAAAT GTCGCCGAAGGCCTCGGCA AAAC CGCCAAAGCCTTCAGCGCC CGGACCGCCGCCCCG TERM 1943 1616016 - 1616040 + g 85 -3.6 -5.27399 | gap 1, overlap 1615988 TGCGGTCGGGGTGGT GCTTCATCGCA AGCT TGCGGT-AGGC TTTTTTGATGTCTTC TERM 1944 1616058 - 1616084 + g 70 -13.1 -2.84459 | gap 1 TTTTGATGTCTTCAT CGCT-GGCGTTC TTGG GAACGCCGAGCG TGTCGTAATAGTCTT TERM 1945 1616244 - 1616200 - R 100 -18.8 -4.15106 | gap 1, opp_overlap 1616207 1616215 1616241, overlap 1616207 CATGAAGCGGTAAAA CGCAAAAGCGGAAAGCCGGGA TTGC TCCTGG-TTTCCGCTCTTGCG CTGGCTACGCATTTT TERM 1946 1616207 - 1616237 + r 81 -12.7 -3.06492 | gap 1, opp_overlap 1616200 1616207, overlap 1616215 CGGTAAAACGCAAAA GCGGAAAGCCGGGA TTGC TCCTGG-TTTCCGC TCTTGCGCTGGCTAC TERM 1947 1616237 - 1616207 - R 93 -10.5 -4.4267 | gap 1, opp_overlap 1616207 1616215, overlap 1616200 CGGTAAAACGCAAAA GCGGAAAGCCGGGA TTGC TCCTGG-TTTCCGC TCTTGCGCTGGCTAC Pnap_1526 1618238 - 1616295 - | molecular chaperone DnaK TERM 1948 1616581 - 1616591 + g 86 -6.8 -5.04385 | AGCTTGTCGCCATAC TCGC CCA GCGA TTTTTTCACGCTGTG TERM 1949 1617750 - 1617773 + g 71 -9.5 -3.74693 | overlap 1617753 GATGCGCTTGACATC GAGGCCGGC GATGCG GCCGGCGTC TTTCGTCGCCTGGCG TERM 1950 1617841 - 1617862 + g 100 -10.1 -4.78753 | overlap 1617827 1617824 1617842 GCTTCGGTGACGGGC TCGCCGAGG TAGT CTTCGGCGG TTTTCTTCATCTTGC TERM 1951 1617842 - 1617861 + g 71 -11.4 -3.46167 | overlap 1617827 1617824 1617841 CTTCGGTGACGGGCT CGCCGAGG TAGT CTTCGGCG GTTTTCTTCATCTTG TERM 1952 1617882 - 1617912 + g 78 -6.7 -4.56775 | overlap 1617884 CTTCATCTTGCGCAG GATGTCGGCGCTG ACCTG CTGGGCCGACAGC TTTTTGCCACGCACT TERM 1953 1617970 - 1617986 + g 75 -4.4 -4.7153 | GGCACGATGGAGTAA GGCATC AGGCC GATGTC TTTTTGCACTTCTTT Pnap_1527 1618975 - 1618406 - | GrpE protein TERM 1954 1619180 - 1619196 + r 76 -10.8 -3.66429 | overlap 1619177 1619193 GAGTTTGTCTTTGAA CCGGCG GAGAA CGCCGG TTATTGCCGGTTATT TERM 1955 1619193 - 1619206 + r 71 -5.9 -4.2602 | overlap 1619180 1619177 AACCGGCGGAGAACG CCGGT TATT GCCGG TTATTTATTGGTGTC Pnap_1528 1619530 - 1619207 - | putative transcriptional regulator Pnap_1529 1620549 - 1619755 - | extensin family protein Pnap_1530 1620934 - 1620557 - | hypothetical protein Pnap_1531 1621952 - 1620999 - | cation diffusion facilitator family transporter Pnap_1532 1622360 - 1622782 + | mono-heme class I cytochrome c TERM 1956 1623236 - 1623216 - g 70 -10.3 -3.59262 | overlap 1623198 CCCGATACCTGGAAA CGGGCCGCC ATC GGCAGCCGG GCCAACTGCGCCGCC Pnap_1533 1622829 - 1623311 + | diheme cytochrome c Pnap_1534 1623331 - 1624095 + | cytochrome B561 TERM 1957 1624159 - 1624179 + G 85 -14.7 -3.60627 | GGCGACGGCCTGCGC GCCGGGCTG CGC CAGCTCGGC TTTCAGGTGGACTGG Pnap_1535 1624108 - 1624776 + | two component transcriptional regulator Pnap_1536 1624773 - 1626122 + | integral membrane sensor signal transduction histidine kinase Pnap_1537 1626287 - 1626994 + | hypothetical protein Pnap_1538 1628259 - 1627015 - | 2-nitropropane dioxygenase, NPD TERM 1958 1627482 - 1627495 + g 76 -9.5 -4.08767 | overlap 1627466 GCGTGGCCACCTGCA CGGCG GCCG CGCCG TTTTCAAGGAATGAC TERM 1959 1628553 - 1628575 + G 74 -9.1 -3.88583 | overlap 1628554 CTTTCTTTTCAACCT GCCGGTCAG CTGAC CTGACCGGG TTTCTGGAGAATTTC TERM 1960 1628554 - 1628574 + G 70 -12.6 -2.92668 | overlap 1628553 TTTCTTTTCAACCTG CCGGTCAG CTGAC CTGACCGG GTTTCTGGAGAATTT Pnap_1539 1628519 - 1629139 + | NADPH-dependent FMN reductase TERM 1961 1629162 - 1629189 + T 77 -11.4 -3.57792 | opp_overlap 1629169, overlap 1629169 CGTGAGCCGCCCATG AAAAAAACCCGC CATG GCGGGTTTTTTA TTTGGGGATGGCTAA TERM 1962 1629169 - 1629182 + T 100 -9.5 -5.63517 | opp_overlap 1629169, overlap 1629162 CGCCCATGAAAAAAA CCCGC CATG GCGGG TTTTTTATTTGGGGA TERM 1963 1629182 - 1629169 - T 100 -9.5 -5.52384 | opp_overlap 1629169 1629162 CGCCCATGAAAAAAA CCCGC CATG GCGGG TTTTTTATTTGGGGA Pnap_1540 1629876 - 1629223 - | (Acyl-carrier-protein) phosphodiesterase TERM 1964 1629484 - 1629501 + g 88 -8.3 -4.72333 | GATGGTTTTGCCGCC GGCCAGG CCGA CCGGGCC TTTTTCGGTGTACTT TERM 1965 1630195 - 1630218 + G 71 -13.2 -2.98942 | GCACCACGCGCAAGC TGTCGCTGAC CGAA GTCGGCGACA TCTATCTGCGCCACT Pnap_1541 1630029 - 1630958 + | LysR family transcriptional regulator TERM 1966 1630944 - 1630963 + F 95 -8.6 -4.83615 | gap 1 CTGGGGAGCGAATCG CCGGACTCA TCC TGAG-CCGG TTTTTATAAGAAATA Pnap_1542 1631270 - 1631848 + | hypothetical protein TERM 1967 1631896 - 1631864 - g 81 -4 -5.0925 | gap 1, overlap 1631866 1631867 CCTCAAAATTAAAAA CACTCCTGGCC-GCA CTTG CGCTGGCCACGGGCG GCCTGGCATCAAGCC TERM 1968 1632414 - 1632438 + G 72 -4.2 -4.56597 | gap 2 TCCGGTGCTGGGCAA GGGCG-GG-CGC GAC GCGACCACGGCC TTTTTGCAGCGCAAC Pnap_1543 1631845 - 1632837 + | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 1969 1633297 - 1633338 + G 88 -7.9 -4.84359 | opp_overlap 1633301 TCGAACCCATGGGCA TCAAGCTGGCCTTCACGCC GGCC GGCGTGGTGATCGCCTTGA TTTTTGTCGGCATGC TERM 1970 1633450 - 1633461 + G 72 -4.4 -4.58283 | ACCGGCTGCAGATTT TCAC CAAG GTGA TTTTTCCGCACATTG Pnap_1544 1632840 - 1633733 + | sulfate ABC transporter, inner membrane subunit CysT TERM 1971 1634615 - 1634585 - g 76 -9.6 -4.06502 | opp_overlap 1634594 1634611 GAGGCTGAAATGAAA GCGGCGGCCCAG TTGCCGC CCGAGCGGCCGC AAGCTGTTGCTGGCA Pnap_1545 1633730 - 1634638 + | sulfate ABC transporter, inner membrane subunit CysW Pnap_1546 1634662 - 1635750 + | sulfate ABC transporter, ATPase subunit TERM 1972 1635989 - 1636018 + G 91 -9.3 -4.40804 | gap 1 GCTGCTGCTGGCCGG CTTTGGTGCGTTCG TGG CGG-CGCGCCAGAG TTTTCTGCAGTGGTA Pnap_1547 1635750 - 1636253 + | disulphide bond formation protein DsbB Pnap_1548 1637117 - 1636287 - | amidohydrolase 2 Pnap_1549 1637226 - 1638140 + | hypothetical protein Pnap_1550 1639185 - 1638184 - | LysR family transcriptional regulator TERM 1973 1638615 - 1638605 - G 74 -4.6 -4.56597 | overlap 1638607 GTCTGCTGGTAAAAA CCGG CCT CCAG CCCCGGCACCAGGCC Pnap_1551 1639234 - 1640172 + | 2-dehydropantoate 2-reductase Pnap_1552 1640201 - 1640599 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1974 1641100 - 1641073 - g 78 -7 -4.57073 | gap 1, overlap 1641051 1641048 CAGGTGGTGCAAAAA GGCG-AGCACC GCCTGAT GGTGCCGCGCC GCCCGACGGCAGCCA Pnap_1553 1640638 - 1641123 + | dehydratase TERM 1975 1641363 - 1641318 - g 73 -13.1 -3.16564 | gap 1 CGCCGAGGTCATCAA GGTCGAGCGGCCGGTGGCCGGC GAT GCCGGCCGC-GCCAGCCCGACG ATGGTGAAAGGCCAA TERM 1976 1641722 - 1641748 + G 74 -12.2 -3.53563 | overlap 1641723 1641739 CGATTGCCGACATGT ACGCCGGCATGC ACG GCGTGTCGGCGA TTTGCGCCGCGCTGT TERM 1977 1641723 - 1641747 + G 78 -15.7 -2.71924 | overlap 1641722 1641739 GATTGCCGACATGTA CGCCGGCATGC ACG GCGTGTCGGCG ATTTGCGCCGCGCTG Pnap_1554 1641184 - 1642425 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 1978 1643131 - 1643117 - g 76 -9.2 -4.07568 | overlap 1643118 GCGCCTGGCGCAAAA CGCCGG CGT CCGGCA ACTGGCCGACGGTGT Pnap_1555 1642422 - 1643249 + | shikimate 5-dehydrogenase Pnap_1556 1643429 - 1643968 + | tripartite ATP-independent periplasmic transporter DctQ TERM 1979 1645180 - 1645204 + G 73 -2.8 -4.77438 | GGGCGTGTGGCCTTT CATGATCGCG CAGTT CACCATCATG TTTTTGATGATCGCT Pnap_1557 1643984 - 1645261 + | TRAP dicarboxylate transporter, DctM subunit TERM 1980 1645285 - 1645271 - f 72 -11.4 -3.08133 | opp_overlap 1645270 1645273 1645275, overlap 1645273 TATTGATTCACTGAA GACCGG CCA CCGGTC GTGTGTGGGTACGCC TERM 1981 1645331 - 1645342 + F 87 -2.2 -5.72207 | TCCTCAATCAGCGTA CAGC CGCC GTTG TTTTTTTAATTTCAG Pnap_1558 1645368 - 1646372 + | TRAP dicarboxylate transporter, DctP subunit Pnap_1559 1646501 - 1646947 + | 3-dehydroquinate dehydratase TERM 1982 1647510 - 1647539 + G 81 -4.1 -4.99043 | gap 1, overlap 1647511 TGCGCGACGACCCGG GCGGCATCGCCCGG CTG CCGGGCGA-GAAGA TTTTCTTTGTCCAGC Pnap_1560 1646981 - 1648879 + | 4-hydroxyphenylpyruvate dioxygenase TERM 1983 1649331 - 1649377 + G 73 -10.7 -3.55084 | gap 1, overlap 1649330 CGGCGGCGTGGGCTC GGC-CATTGCGGCGTCGCTGGC TGCG GCCGGCGTGGCGGCACTGAGCC TGTTTGATGTTCACG Pnap_1561 1648918 - 1649751 + | shikimate dehydrogenase TERM 1984 1649791 - 1649816 + T 84 -13.4 -3.02324 | opp_overlap 1649786 1649787, overlap 1649787 GAAATCAGAAGTCGC GTCAAGCGTC CTTGCA GACGCTTGAC TGTGCTTTAGATCAC Pnap_1562 1651019 - 1649823 - | aromatic amino acid aminotransferase TERM 1985 1652419 - 1652429 + G 91 -6.8 -5.27335 | GTTCGAGTCCAAGGT TCGC CAG GCGA TTTTTGTTTCCGCCA Pnap_1563 1651193 - 1653301 + | excinuclease ABC subunit B TERM 1986 1653402 - 1653377 - T 84 -13.9 -3.14564 | CTAGCGCCGTAGGAA TCCCCCCCGCC TTCA GGCGGGGGGAG GATGTCAAAGAGAAC Pnap_1564 1653772 - 1653437 - | ferredoxin, 2Fe-2S type, ISC system Pnap_1565 1655693 - 1653816 - | Fe-S protein assembly chaperone HscA TERM 1987 1655726 - 1655710 - R 71 -10.1 -3.57144 | TTGTGGACCCTTAAA CGGCGAA GCT CTCGCCG CAGCCGCAATTGGCC Pnap_1566 1656028 - 1655705 - | iron-sulfur cluster assembly protein IscA TERM 1988 1655938 - 1655983 + g 72 -3.9 -4.59773 | overlap 1655940 AGCAGCCGCTGGTCT TGAC-GGCCAGGCGCAGGCCG ATGCCG CTGCC-GCGCTTGGCCAGGGA TTTTTCGACGTGGCG Pnap_1567 1656417 - 1656040 - | iron-sulfur cluster insertion protein ErpA Pnap_1568 1656921 - 1656469 - | scaffold protein TERM 1989 1656939 - 1656927 - R 74 -2.7 -4.85599 | overlap 1656929 TGTATGCCATAAAAA TTCTC CGT AAGAA GTGGGGATGAACAGT Pnap_1569 1658229 - 1656985 - | cysteine desulfurase IscS TERM 1990 1657169 - 1657138 - G 79 -8.7 -4.27316 | gap 1 GCGGCCAATCGAAAA GC-GCACCGAGCTG TGGGC CAGCTCGTCGCTGC GGCCCATGGCGCGCA TERM 1991 1657708 - 1657677 - G 70 -12.9 -2.85712 | opp_overlap 1657674 1657707, overlap 1657674 1657695 CGACATGCAGAATCA CGCCCTTGGCGCG GCAAAT CGCGCCGATGGCG GCGATGTCCTGAATC Pnap_1570 1658567 - 1660276 + | transcriptional regulator NifA TERM 1992 1660360 - 1660328 - T 93 -15.5 -3.09878 | opp_overlap 1660328 GCTACTGATTGAATA GCTGCCAGCGCATGC TAC ACGTGCGCTGGCGGC TTTTTTTGTATTCAA TERM 1993 1660328 - 1660360 + T 100 -19.2 -5.80817 | opp_overlap 1660328 GCTACTGATTGAATA GCTGCCAGCGCATG CTACA CGTGCGCTGGCGGC TTTTTTTGTATTCAA Pnap_1571 1660860 - 1660372 - | GCN5-related N-acetyltransferase TERM 1994 1660531 - 1660478 - G 79 -10.9 -3.89346 | gap 1, overlap 1660460 GCCTCATCGGATAAA GCCTGCACGGTCATGCCGCGAATGCC GAT GGCATCCGCGGCCTG-CAAAACACGC ATTCCGGCATCCCGA Pnap_1572 1661141 - 1660857 - | hypothetical protein TERM 1995 1661183 - 1661193 + H 70 -5.4 -4.37886 | opp_overlap 1661189 CTAGCATTTTTGTAA TGAC AAC GTCA TTTTGTCGCAAATAA TERM 1996 1661540 - 1661507 - g 77 -2.4 -5.04987 | opp_overlap 1661515 AACAGCTTGAAAAAA TTGTCCGCCATGTC GCATGT GACACATCCGACAA ATCCTTCAACCCATT Pnap_1573 1661279 - 1661557 + | hypothetical protein Pnap_1574 1661636 - 1663231 + | nitrogenase cofactor biosynthesis protein NifB Pnap_1575 1663266 - 1663460 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pnap_1576 1663487 - 1663897 + | iron-sulfur cluster assembly accessory protein TERM 1997 1664063 - 1664025 - g 71 -10.9 -3.44848 | gap 1, opp_overlap 1664024, overlap 1664023 GGCGCTGATCAAACA GGCCG-GGCTGCTGCGCC ATCT GCCGCAGCAGGCGCTGCC CTTGCTGGAGCAGGC TERM 1998 1664073 - 1664110 + G 84 -17 -2.74563 | overlap 1664102 GCTGCCCTTGCTGGA GCAGGC-CCGGGCGGCGG CGCC CCGCCACCCGGTGCC-GC TGATTGCGCTGTACC TERM 1999 1664245 - 1664268 + G 76 -8 -4.28254 | CCCAGCGATGAGGCG GCGCGCGATG ACGC CGCCGTGCGC TTTTACCTGTTCACC Pnap_1577 1663924 - 1664493 + | hypothetical protein Pnap_1578 1664490 - 1665329 + | leucine-rich repeat-containing protein Pnap_1579 1665322 - 1665684 + | NifZ family protein Pnap_1580 1665681 - 1665992 + | NifZ family protein TERM 2000 1666249 - 1666270 + G 81 -13.7 -3.57144 | GGCGCGCGACCATGC CCGTGGCGC CTGG GTGCCACGG TTTCAGGATGAACCG Pnap_1581 1665989 - 1666342 + | hypothetical protein TERM 2001 1666608 - 1666640 + G 71 -12.7 -3.02144 | gap 1, opp_overlap 1666590 1666588, overlap 1666612 CCGTGCGCGGCCTGC TGGC-CGCCGCCGC CCCTGA GCGGCGGCGTGTCG TGTTCAGCCGCATCG TERM 2002 1666612 - 1666635 + G 83 -16.7 -2.9155 | opp_overlap 1666590 1666588, overlap 1666608 GCGCGGCCTGCTGGC CGCCGCCGC CCCTGA GCGGCGGCG TGTCGTGTTCAGCCG TERM 2003 1666869 - 1666818 - g 76 -9.3 -4.07618 | gap 3 CCGCCAACAATGAAA CCGGCGCCCTGATGCC-G-GTGGCCG AAG CCGCCGCGCTGGCG-CAGGCCGCCGG GGCGCGGCTGCATGT TERM 2004 1666903 - 1666915 + G 85 -6.2 -5.04249 | overlap 1666906 CGCCACCCAGTTCAT CGGC AAGCA GCCG TTTGTTTTTTCCACC TERM 2005 1666906 - 1666919 + G 78 -3.1 -5.03314 | overlap 1666903 CACCCAGTTCATCGG CAAGC AGCC GTTTG TTTTTTCCACCTGCG Pnap_1582 1666367 - 1667515 + | aminotransferase, class V Pnap_1583 1667559 - 1667777 + | NifT/FixU family protein Pnap_1584 1667789 - 1668052 + | hypothetical protein TERM 2006 1668309 - 1668353 + G 100 -17.9 -3.54424 | gap 1 ACCTCGCACGCCTGG CACCAG-GTGGCGCAGGCCA TCACGC TGGCCGGCGCCACCCCGGTG TTTGCCGACATCAAC Pnap_1585 1668057 - 1669220 + | DegT/DnrJ/EryC1/StrS aminotransferase Pnap_1586 1669231 - 1670076 + | hypothetical protein Pnap_1587 1670137 - 1670463 + | ferredoxin TERM 2007 1670641 - 1670614 - g 75 -14 -3.09933 | GTGCAAGTGATTGAA GCCCGCGACCGC CTGG GCGGGCGCGTGC AGACCCGGCATTGCG TERM 2008 1670926 - 1670961 + G 85 -15.4 -3.41234 | gap 1 GGCTCCCTGCACCTT GGCGTTGCGGTGCGCGC ATT GCGCG-ACCGGGGCGCC TTCATTGAATTACTG TERM 2009 1671022 - 1671054 + G 81 -13.3 -3.72893 | CAGGTGGTGCTGGCG CTGCCGCCGCGCCTG GTG CATGAGCGGCTGCAG TTTGATCCCGAACTG TERM 2010 1671244 - 1671261 + G 76 -8.3 -4.1822 | opp_overlap 1671238 1671242 GCCAGCGAAGGCAGC GCCGGCG CGCT CGGCGGC TTTATTGCCCTGAAC TERM 2011 1671442 - 1671489 + G 86 -8.3 -4.56597 | overlap 1671443 AGCCCGCCCGAGCCG C-CGCAGGCCAATCCGCTGCTGC GCCA GCCGCAGTGGGCGGGCC-GCGTG TTTTTCGGCGGCAGC TERM 2012 1671443 - 1671487 + G 81 -12 -3.90048 | gap 1, overlap 1671442 GCCCGCCCGAGCCGC CGCAGGCCAATCCGCTGCTGC GCCA GCCGCAGTGGGCGGGCC-GCG TGTTTTTCGGCGGCA TERM 2013 1671615 - 1671671 + G 100 -13.7 -4.56775 | gap 4, overlap 1671616 1671639 CAGCGCGCAGGCGCT G-GCCGCCGTGCATCTGGCGCGGCCTGCC GAC GGC-GCCCGCGCC-GAGGC-CGTCGGCGC TTTTTCGGCCAGCGT TERM 2014 1671616 - 1671669 + G 83 -17.4 -2.60032 | gap 3, overlap 1671615 1671639 AGCGCGCAGGCGCTG GCCGCCGTGCATCTGGCGCGGCCTGCC GAC GGC-GCCCGCGCC-GAGGC-CGTCGGC GCTTTTTCGGCCAGC TERM 2015 1671639 - 1671670 + G 82 -14.4 -3.33744 | gap 1, overlap 1671616 1671615 GCATCTGGCGCGGCC TGCCGACGGCGCCCG CGC CGAG-GCCGTCGGCG CTTTTTCGGCCAGCG Pnap_1588 1670488 - 1672119 + | amine oxidase TERM 2016 1672483 - 1672459 - g 88 -14.3 -3.78775 | GCGTCTATCAGCAAA GCCAGCCGGAA TTG TTCCGGATGGC GTCGTGAACCTTCCC TERM 2017 1672679 - 1672638 - g 74 -12.1 -3.53012 | opp_overlap 1672640 CGCGCTGGTGCCAAA GCGCGGCCGCGCTGCCGCT GTTG ACCGGCAACGCCGCCTGGC CCGGCCAGACGCCCA Pnap_1589 1672397 - 1673962 + | hypothetical protein TERM 2018 1674005 - 1673995 - T 95 -5.4 -5.28983 | opp_overlap 1673996 1673999, overlap 1673997 1673999 GTCAAAATATAAAAA GACA GGT TGTC GTACAACCTACTTTA TERM 2019 1674015 - 1673997 - T 81 -8.2 -4.25747 | opp_overlap 1673996 1673999, overlap 1673995 1673999 CAAAATATAAAAAGA CAGGTTGT CGT ACAACCTA CTTTACGCTCTGCCT Pnap_1590 1674862 - 1674041 - | GntR domain-containing protein TERM 2020 1674455 - 1674480 + g 70 -10.4 -3.56092 | gap 1, overlap 1674455 1674458 TTCCGGCGTTCTCCT CTG-GGCGGCC AGGCC GGCCGCCTCGG TTTCAAGGCTGATGC TERM 2021 1674729 - 1674750 + g 70 -10.1 -3.60074 | GGTTTCAATTCGCCT GCCTGGATG CTGG CAGCCAGGC TTTCGACGATTTCTC TERM 2022 1675335 - 1675358 + G 70 -7.4 -4.07568 | AAGCGCGTGGTGTTC GCCAGTTCCA ACCA TGTGACTGGC TTTTACCGCCAGGAC Pnap_1591 1675002 - 1675811 + | NAD-dependent epimerase/dehydratase TERM 2023 1676594 - 1676562 - g 81 -4 -5.00616 | overlap 1676564 GTGCCGGTGAAAAAA CCGGCCATGTGC-GCC TTT GGCGGCGC-CGGCCTG GACACCCTGTTCGTC Pnap_1592 1675818 - 1676720 + | SMP-30/gluconolaconase/LRE domain-containing protein TERM 2024 1676795 - 1676773 - g 81 -2.6 -5.1615 | TGAAGATTCAAAAAA CACTGCTG GCCGTTG CAGCCGCG CTGACCCTGGTTCCC Pnap_1593 1676757 - 1677728 + | TRAP dicarboxylate transporter, DctP subunit Pnap_1594 1677772 - 1678326 + | tripartite ATP-independent periplasmic transporter DctQ Pnap_1595 1678317 - 1679609 + | TRAP dicarboxylate transporter, DctM subunit TERM 2025 1679923 - 1679943 + G 79 -9 -4.19953 | gap 1, opp_overlap 1679895 GGTGCCGATCATTGC CGGCGTCGG CGGC CCGAC-CCG TTTTGCGATTGCCTG Pnap_1596 1679672 - 1680583 + | 5-dehydro-4-deoxyglucarate dehydratase TERM 2026 1681512 - 1681534 + G 78 -6.9 -4.56775 | overlap 1681513 1681514 GATGCGTTCTCGGGC GTGACCGCC AATCC GGCGGTCGG TTTTTGCACCGACCT TERM 2027 1681716 - 1681698 - g 72 -3.7 -4.59773 | overlap 1681699 GCCTACCTGGAAAAA GGCCGCG TGGAC CGCAGCG CCAACACCACGCCGG Pnap_1597 1680606 - 1682204 + | galactarate dehydratase TERM 2028 1682384 - 1682358 - g 70 -12.2 -3.14468 | opp_overlap 1682376 1682379, overlap 1682353 1682373 GGCGAGTACACGCAA GCCAGCGCCGAG CAA CTCGACGCCGCC GTGCAAGCCGCGCGC TERM 2029 1683057 - 1683067 + G 86 -4.6 -5.24129 | overlap 1683050 GCGGTCGAGCTCAGC GTGC AGA GCGC TTTTTTCTCCACCGG TERM 2030 1683291 - 1683326 + G 88 -8.1 -4.72272 | gap 1 GGCGCGGTGCTGCTG GCCGGCGGCGAGC-GC CTGAA GCTGCCCACCGACGGC TTTTTCATGGCCCCC Pnap_1598 1682247 - 1683686 + | aldehyde dehydrogenase TERM 2031 1683728 - 1683693 - f 70 -9.6 -3.40403 | CTGCCTTGATGACAA GCGGCCGGGTTATTCA TTCG TCACCAGCCCGGCCGC TCAGACCGGCGGATT TERM 2032 1684098 - 1684079 - g 71 -11.4 -3.53012 | gap 1, opp_overlap 1684082 TTCCGTTTGTCGAAA GCGCCGACG AGG CG-CGGCGC GCGGTGGCCGCCACG Pnap_1599 1683763 - 1684545 + | alpha-dehydro-beta-deoxy-D-glucarate aldolase Pnap_1600 1684585 - 1685466 + | 2-hydroxy-3-oxopropionate reductase TERM 2033 1685990 - 1685952 - g 91 -2.8 -5.40072 | overlap 1685953 CGCTGTCGAAAAAAA CCGAGCTGAACTTTGCCG TCA CGGCCATGGGCAGCGCGC CGCACCTGGCCGGCG Pnap_1601 1685504 - 1686472 + | hypothetical protein TERM 2034 1686555 - 1686541 - f 74 -3.4 -4.87665 | overlap 1686542 TTTTATTCATAAAAA TGCCAG ATT CCGGCC TCACCGGCCAGCGGC Pnap_1602 1686580 - 1687572 + | TRAP dicarboxylate transporter- DctP subunit Pnap_1603 1687824 - 1687642 - | hypothetical protein TERM 2035 1687933 - 1687962 + r 100 -23.7 -4.11484 | opp_overlap 1687933 ACGCCCATAAAAAAA CGGCCAGCGCCTT GTGC AAGGCGCTGGCCG TTTTGCCGGGTTGAC TERM 2036 1687962 - 1687933 - R 100 -23.7 -5.61596 | opp_overlap 1687933 ACGCCCATAAAAAAA CGGCCAGCGCCTT GTGC AAGGCGCTGGCCG TTTTGCCGGGTTGAC Pnap_1604 1690194 - 1687984 - | RpoD family RNA polymerase sigma factor TERM 2037 1688854 - 1688874 + g 74 -5.3 -4.58685 | CATGACGTTGGACCA CGGCTTGCC GGC GGCGACCTG TTTTTCAACCCATTT TERM 2038 1689056 - 1689078 + g 80 -5.5 -4.74706 | GCGGTAAAACGCACC GTCATCAGC TCGTC GCTGAGGGC TTTTTGCGTCTTCAG TERM 2039 1689093 - 1689114 + g 71 -5.1 -4.47707 | gap 1, overlap 1689093 CTTTTTGCGTCTTCA GG-TACGTCG GGC CGCCGTAGCC TTCTTTTTCGTAGAG TERM 2040 1690398 - 1690385 - R 81 -3.7 -5.26119 | opp_overlap 1690385, overlap 1690386 CGGTCAAAAATAAAA GCGGC CGGT GCCGG GGGAGCACATGGACG TERM 2041 1690582 - 1690597 + r 70 -3.2 -4.69464 | overlap 1690579 GTAGCCTGTGTTCTG CCTGTA TTCA TGCGGG TTTTTGAGGTGTTTT Pnap_1605 1692619 - 1690589 - | DNA primase TERM 2042 1691667 - 1691621 - G 76 -12.7 -3.53224 | CACGTCGCTGGCAAA GGGCAGGGCGGCGTCCAGCGC CTTGC GCGCCGCGCGCCGGCCGGCGC TGTCGCCGTCAAAGC TERM 2043 1692391 - 1692425 + g 78 -7.1 -4.56597 | gap 1 CGATGAACGTCATGC CGGCGTGGTCCATCAG AAAG CTGATGG-CATTGCCG TTTTTGCCGCAGCCA TERM 2044 1693096 - 1693125 + G 90 -2 -5.40072 | opp_overlap 1693113, overlap 1693067 1693066 1693112 TCAGCTCGCTGGCGT TCACCGTGCTGG AAAACG CCATGTCGGTGA TTTTTTTGCACCGCG Pnap_1606 1692714 - 1693649 + | putative ribonuclease BN Pnap_1607 1695587 - 1693731 - | gamma-glutamyltransferase TERM 2045 1694225 - 1694199 - G 72 -2.1 -4.72272 | opp_overlap 1694198, overlap 1694200 1694201 GTTGTTCAGCAAAAA GCCGCCGGC CTTCTTGGT GCCGCCGTC GGTCATCAGGCGCGA TERM 2046 1694601 - 1694637 + g 73 -10.8 -3.63515 | gap 1 GCCGGGTACGCCGCC CATGCCAGCCACCA-GC CCCA GCGTGGCGGCCGGCGTG TTGTTCAGGATGCCC TERM 2047 1695093 - 1695077 - G 74 -5.1 -4.56597 | opp_overlap 1695085 1695087 TGGCCGGTGCAAAAA GCTGC GCCCACG GCAGC TTGCCGTATTGCTGG TERM 2048 1695758 - 1695727 - R 80 -10 -4.02999 | gap 1, opp_overlap 1695746, overlap 1695729 1695731 CAAAAAGAGAGTAAA GAC-AGCGCCGCCCG TTG CAGGCGGCGCAAGAC TGCCTGGCTTAAGAC TERM 2049 1695755 - 1695729 - R 89 -13.6 -3.57715 | opp_overlap 1695746, overlap 1695727 1695731 AAAAGAGAGTAAAGA CAGCGCCGCCCG TTG CAGGCGGCGCAA GACTGCCTGGCTTAA TERM 2050 1695753 - 1695731 - R 100 -18.4 -3.34075 | opp_overlap 1695746, overlap 1695729 1695727 AAGAGAGTAAAGACA GCGCCGCCCG TTG CAGGCGGCGC AAGACTGCCTGGCTT Pnap_1608 1696228 - 1695767 - | hypothetical protein TERM 2051 1696263 - 1696249 - R 71 -4.2 -4.56597 | overlap 1696251 GGCCCTTGTTAAAAA TGTTGC AGT GCAGCA AGTATGGGGCACAAA TERM 2052 1696335 - 1696379 + r 73 -9.4 -3.86015 | gap 1, overlap 1696343 1696344 AGCCAAGGCGGCGTT TCCG-GTGACGTTCTGACCGT ACGG ACGGTCAGAACATTCCTTGGA TTTATCCGGAAAGTG TERM 2053 1696343 - 1696370 + r 84 -12.8 -3.44289 | overlap 1696335 1696344 CGGCGTTTCCGGTGA CGTTCTGACCGT ACGG ACGGTCAGAACA TTCCTTGGATTTATC TERM 2054 1696344 - 1696369 + r 89 -16.3 -2.6585 | overlap 1696343 1696335 GGCGTTTCCGGTGAC GTTCTGACCGT ACGG ACGGTCAGAAC ATTCCTTGGATTTAT Pnap_1609 1697169 - 1696402 - | short-chain dehydrogenase/reductase SDR TERM 2055 1697008 - 1697046 + g 100 -15.2 -4.60041 | opp_overlap 1697007 1697006, overlap 1696967 GCACTTGACGAAAGC GGCAACGCCGTCGCCCAG TTC CTTGGCGATGGCTTCGCC TTTTTCAGCCTGCAT TERM 2056 1697309 - 1697284 - R 100 -13.3 -4.7254 | ATGGCGCATGAAAAA GCCCGGCCATC TTTG AATAGCCGGGC CTTGGGGCAAATGCA TERM 2057 1697357 - 1697374 + r 82 -11.3 -3.89971 | overlap 1697369 TTTGTAGCCCACGCG GTCCAGC ATCT GCTGGAC TTTGGTCTGGTTGTA Pnap_1610 1698397 - 1697339 - | extracellular solute-binding protein Pnap_1611 1698427 - 1699410 + | patatin TERM 2058 1699512 - 1699493 - T 100 -12.2 -5.86061 | TTTGATCAAAAAAAA GCCCAATC TCGC GATTGGGC TTAACGGAACCTCGA Pnap_1612 1700194 - 1699652 - | phasin family protein TERM 2059 1699730 - 1699747 + g 72 -4 -4.57073 | overlap 1699719 GGTTTCGGCCATGTC GCCGGC TTGCTT GACGGC TTTTTGCACCGACTC TERM 2060 1699947 - 1699962 + g 83 -4.6 -5.00616 | overlap 1699949 ATGTCATACAGGTGA CGGCTG TAGG CAGCGG TTTTTTCAGCCAGGG TERM 2061 1701041 - 1701088 + G 78 -6.8 -4.56597 | gap 1, overlap 1701046 CTGCAGGCGCTGGAG CATGCCCTGGACGAGCT-GGAGC GGC GCTTCGAGCCCGGCCTGGTCCTG TTTTTGGCGGGCGCC Pnap_1613 1700324 - 1701325 + | histone deacetylase superfamily protein Pnap_1614 1701325 - 1701792 + | thioesterase superfamily protein TERM 2062 1702426 - 1702470 + G 73 -11.4 -3.66378 | gap 1, opp_overlap 1702420 TTGCGAAAATCATCC TGCCGCACATCGGCG-CGGGC GAGG GCGAGATGCTGGTGTGCGGCA TTTCACTGGGCTATG Pnap_1615 1701789 - 1702562 + | nitroreductase TERM 2063 1703908 - 1703947 + G 85 -3.5 -5.26316 | gap 2, opp_overlap 1703934 GGCGGCGACAACGGG CTGATCGGCC-TCG-CGCT GGTA ACCGACGACGGCCGGCCGG TTTTTTATGCGCTGC TERM 2064 1704288 - 1704334 + G 70 -12.3 -3.18023 | opp_overlap 1704287, overlap 1704286 GCTGACGTATGCAAG CGCCGAGCTGGGCCGCG-AAGTG ACT TACTGGCGCGGCCT-GCTGGGCG TGTTCATCATGCTGA Pnap_1616 1702567 - 1704435 + | inner-membrane translocator Pnap_1617 1704435 - 1705193 + | ABC transporter related TERM 2065 1705188 - 1705211 + G 71 -8.2 -3.86346 | gap 1, overlap 1705187 CCGGGAGGCGAGCAT GC-TTGAGCTG GAC CAGCTCAGCGC TTTCTACGGCCCTGC Pnap_1618 1705186 - 1705827 + | ABC transporter related TERM 2066 1705850 - 1705831 - f 78 -7 -4.60041 | opp_overlap 1705831, overlap 1705832 AGGGACTCGTAAAAA TCAGCCCC GTTG GGGGCCGC TGATTCATTTTTCAA TERM 2067 1705849 - 1705832 - f 73 -10.5 -3.35542 | opp_overlap 1705831, overlap 1705831 GGGACTCGTAAAAAT CAGCCCC GTTG GGGGCCG CTGATTCATTTTTCA Pnap_1619 1705889 - 1706242 + | peptidylprolyl isomerase, FKBP-type TERM 2068 1707512 - 1707489 - g 75 -3.8 -4.77036 | opp_overlap 1707492 1707500, overlap 1707491 TGCGACGACGAAAAA TACCTGGC TTACCTGC GCCAGGTT TTCGAGATTGCATCG Pnap_1620 1706340 - 1707539 + | nicotinate phosphoribosyltransferase TERM 2069 1707707 - 1707723 + G 77 -4.3 -4.83169 | overlap 1707700 1707713 1707716 TGTCGATTGCGCTGC TGCCGCT GCT GGCGCCA TTTTTCTGGCACCAT TERM 2070 1708202 - 1708222 + G 72 -3.9 -4.54047 | CGGAAACGCTGTTTC TGATCGGCA GCC TGCTGGCCA TTTTCTATGCCCTCG Pnap_1621 1707544 - 1708977 + | putative transmembrane protein Pnap_1622 1708996 - 1709982 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Pnap_1623 1710013 - 1711338 + | hypothetical protein Pnap_1624 1712232 - 1711369 - | hypothetical protein TERM 2071 1712005 - 1712017 + g 72 -7.7 -4.21275 | GCGGGCGCTGCCGAA CACCA CGA TGGTG TTTTCGATGCCTTGG TERM 2072 1712370 - 1712385 + r 95 -10.4 -4.56597 | opp_overlap 1712370 CTGGAAATAAAAAAA GGCTCC TGAT GGAGCC TTTTTAGCGAAGCGA TERM 2073 1712385 - 1712370 - R 100 -10.4 -5.95539 | opp_overlap 1712370 CTGGAAATAAAAAAA GGCTCC TGAT GGAGCC TTTTTAGCGAAGCGA Pnap_1625 1712966 - 1712412 - | elongation factor P TERM 2074 1712767 - 1712788 + g 76 -6.5 -4.4648 | overlap 1712771 TAAGTGCATTCCTTC TTGTCCAGG ATGA CCTGGTCGA TTTTGTCGTCGGCCT TERM 2075 1713081 - 1713104 + r 74 -2.4 -5.00616 | gap 1, opp_overlap 1713072 TATCAACAGGCTAAC CCGC-AGAACC CGT GATTTTAGCGG TTTTTTGCCACAAAG Pnap_1626 1714225 - 1713098 - | hypothetical protein TERM 2076 1713371 - 1713360 - G 81 -7.2 -4.52857 | ATGTGCCAGACAAAA GGCC TGCC GGCC CAAAGGGCACGTACC TERM 2077 1714135 - 1714112 - G 72 -12.4 -3.35798 | gap 1 ATCGTCCACCCACAA GCG-CACGCGG TGG CCGCGCGTCGC CAGGTCGGCGGCCAG TERM 2078 1714414 - 1714402 - g 74 -4.7 -4.66833 | opp_overlap 1714402 1714400 GCGCAACCTGAAAAA GCGGG TCA CCAGC TATTTCCAGAAAAAC TERM 2079 1714448 - 1714429 - g 75 -2.8 -4.84359 | gap 1, overlap 1714432 CTATTTCCAGAAAAA CCATG-GCG GCA CGCGCATTG GCCACATGATCACCA TERM 2080 1715003 - 1714953 - g 72 -3.7 -4.55128 | gap 1, overlap 1714954 AGCTGGAAAGGAAAA TGCTGGCGCACGCCGACCGGCTGG AGTT CGAGCAGGCCGCCGAGCTGC-GCA ACCAGATGTCGGCGC TERM 2081 1715132 - 1715157 + G 71 -8.2 -3.90744 | gap 1, overlap 1715132 CTGGCGATGGTGCGC GGC-GGCCGCC ACCTG GGCGACCGGCC TTATTTCCCGACGCA TERM 2082 1715478 - 1715443 - g 100 -11.8 -4.84017 | gap 1 AATGGCGCAGAAAAA TGC-CGGCCTGCAACTG GCG CGGCTGCTGGCCGAGCA GGGCTCGCAGCAGGC Pnap_1627 1714259 - 1716208 + | excinuclease ABC, C subunit Pnap_1628 1716231 - 1716836 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Pnap_1629 1716860 - 1717780 + | hypothetical protein Pnap_1630 1718702 - 1717740 - | LysR family transcriptional regulator TERM 2083 1718889 - 1718909 + G 73 -12.5 -3.17051 | overlap 1718890 CCCTGCACACTTTGC GCGGCGGAC GCG GTGCGCCGC TGTTGCTGCTGCACG TERM 2084 1718956 - 1718937 - g 73 -11.4 -3.5944 | ACGGACATCCGCAAA CGCATGCC ATGT GGCACGCG GTGGCTGACGAACTG Pnap_1631 1718828 - 1719706 + | alpha/beta hydrolase fold Pnap_1632 1719723 - 1720829 + | tartrate dehydrogenase Pnap_1633 1721079 - 1721351 + | histone family protein DNA-binding protein TERM 2085 1721481 - 1721454 - f 74 -11.4 -3.19463 | opp_overlap 1721459, overlap 1721459 CCCACCACCCACTAA GAAAAGGCGAAC CAGG GTTCGCCTTTTT TGTTGTTGCGCCCGC TERM 2086 1721459 - 1721476 + F 100 -11.3 -5.64873 | opp_overlap 1721454 1721459 CACCCACTAAGAAAA GGCGAAC CAGG GTTCGCC TTTTTTGTTGTTGCG TERM 2087 1721476 - 1721459 - f 100 -11.3 -4.72497 | opp_overlap 1721459, overlap 1721454 CACCCACTAAGAAAA GGCGAAC CAGG GTTCGCC TTTTTTGTTGTTGCG TERM 2088 1723045 - 1723019 - g 70 -7.3 -3.97622 | gap 1, overlap 1723014 1723020 TGATGTAAAAGACAA TGTT-CGCCAGC GCTG GCTGGCGCAACG TAGTGCCGAAGAAGC Pnap_1634 1721523 - 1723460 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2089 1723579 - 1723624 + T 93 -17.3 -2.87931 | gap 1, opp_overlap 1723590, overlap 1723582 1723590 CAGCCACCCCAAGTA CAGTAAAGAAACCCCGCTATCA ATC TGATAGTGGGGTTT-TTTATTG TCTGTACGAGATCAG TERM 2090 1723582 - 1723621 + T 95 -15.4 -3.58905 | gap 1, opp_overlap 1723590, overlap 1723579 1723590 CCACCCCAAGTACAG TAAAGAAACCCCGCTATCA ATC TGATAGTGGGGTTT-TTTA TTGTCTGTACGAGAT TERM 2091 1723614 - 1723590 - T 100 -12.9 -4.54205 | opp_overlap 1723582 1723579 1723590 AGTACAGTAAAGAAA CCCCGCTATCA ATC TGATAGTGGGG TTTTTTATTGTCTGT TERM 2092 1723590 - 1723614 + T 100 -15.1 -5.62045 | opp_overlap 1723590, overlap 1723582 1723579 AGTACAGTAAAGAAA CCCCGCTATCA ATC TGATAGTGGGG TTTTTTATTGTCTGT Pnap_1635 1724166 - 1723654 - | 2'-5' RNA ligase TERM 2093 1725177 - 1725157 - g 76 -6.7 -4.44667 | overlap 1725159 GCCTTCAAGAACAAA GGCGTGCAG GCC CTGCTCGAC GCGGTGATCGACTAC TERM 2094 1726114 - 1726095 - g 76 -7 -4.42238 | CGATTCGAATGAAAA CGCCTACC GCAT GGCCGGCG CAATTGCCTTCAAGG Pnap_1636 1724338 - 1726437 + | translation elongation factor G TERM 2095 1726504 - 1726539 + F 95 -14.8 -3.6502 | opp_overlap 1726508 1726511, overlap 1726508 TTTCCGGGATTCCAA TAAAGAACCCCCGCCT CAAG GGGCAGGGGTTCTTTG TTTGGATAAAGAATG TERM 2096 1726508 - 1726535 + F 100 -13.4 -4.46112 | opp_overlap 1726508 1726511, overlap 1726504 CGGGATTCCAATAAA GAACCCCCGCCT CAAG GGGCAGGGGTTC TTTGTTTGGATAAAG TERM 2097 1726535 - 1726508 - f 100 -14.9 -4.1822 | opp_overlap 1726508 1726504, overlap 1726511 CGGGATTCCAATAAA GAACCCCCGCC TCAAGG GGCAGGGGTTC TTTGTTTGGATAAAG TERM 2098 1726532 - 1726511 - f 86 -10.8 -4.21438 | opp_overlap 1726508 1726504, overlap 1726508 GATTCCAATAAAGAA CCCCCGCC TCAAGG GGCAGGGG TTCTTTGTTTGGATA TERM 2099 1726573 - 1726558 - f 86 -10.4 -4.18044 | overlap 1726554 GGATAAAGAATGAAA GGGACG TCCC CGTCCC GAGCGAGTTGCGACC Pnap_1637 1726673 - 1727689 + | transposase IS116/IS110/IS902 family protein Pnap_1638 1730652 - 1728067 - | hypothetical protein TERM 2100 1730937 - 1730918 - R 84 -13.6 -3.0782 | CAATGGGGCAACACA TCCGCCCT GAAG AGGGCGGA GGAACGCCAATGAGG Pnap_1639 1731394 - 1731029 - | hypothetical protein Pnap_1640 1733403 - 1731415 - | hypothetical protein TERM 2101 1731518 - 1731540 + g 75 -12 -3.66666 | opp_overlap 1731516, overlap 1731491 1731538 GTGCCGTAGTTAATC CCGGTCAGGG GAG CTTTGACCGG TTTAACCGTTTTCAA TERM 2102 1732793 - 1732775 - G 79 -11 -3.90744 | opp_overlap 1732774 1732792 GCTGGGTTCAAATAA CCGAACAG TTG CTGTCCGG CTGTCGTCAGACTGG TERM 2103 1733249 - 1733232 - G 74 -5.6 -4.4715 | GTGCAAGCCAGAAAA CGGTAA ATAAAA TTACCG CGAGGATGCGTTGCA TERM 2104 1733301 - 1733290 - G 77 -2.2 -5.0916 | CCCCCAATACAAAAA CTGC CGCT GCAA TTGCTTTTCTGGCCC Pnap_1641 1733813 - 1733466 - | hypothetical protein Pnap_1642 1735206 - 1733827 - | hypothetical protein TERM 2105 1734032 - 1734009 - G 81 -7.4 -4.47491 | gap 1, overlap 1734013 ACACGAAGAAAAGAA GGCACAGCCCC AAG GCGGCT-TGCC GCTGGTCAAGGTAAA Pnap_1643 1736717 - 1735206 - | glycosyl transferase, group 1 TERM 2106 1735878 - 1735890 + g 74 -2.6 -4.82901 | overlap 1735849 GGCGCCGTCACGGAT CTGG CGCTC CCGG TTTTTCTCGAAAAGC Pnap_1644 1737699 - 1736695 - | hypothetical protein TERM 2107 1736777 - 1736794 + g 78 -6.3 -4.62069 | gap 1, overlap 1736781 CGGCTGCTGCCATTT CCAGCCTG TGC CAGG-TGG TTTTTGACATCGGAA TERM 2108 1737112 - 1737133 + g 72 -12.3 -3.2614 | overlap 1737126 AAAATCCTGATTCGG CGCGCAGTT GCCA AGCTGCGCG TTCCTGTCGCGAATG TERM 2109 1737353 - 1737378 + g 73 -12.5 -3.17075 | overlap 1737354 1737361 1737373 CAGGCTCTTGAGATG CCCGCCATGCC GCGC GGTTTGGCGGG TTGGCTTGGCAAGCC Pnap_1645 1738874 - 1737723 - | hypothetical protein TERM 2110 1738557 - 1738532 - G 74 -12.5 -3.31792 | CCATGATCTCCAGAA GCCACTCGCCG ATTC CGCCGAGCGGC TCATCACGCGTCACG Pnap_1646 1741535 - 1739268 - | hypothetical protein TERM 2111 1740309 - 1740281 - G 73 -10.9 -3.6682 | TTTCAGTCAGCGAAA GCGCCAGCTGATC GTG GCCAAGCTGGCGC AGCGCGGTGACCCGG Pnap_1647 1742407 - 1741619 - | putative signal peptide protein TERM 2112 1742989 - 1743015 + r 70 -6.5 -4.07568 | gap 2, opp_overlap 1742987, overlap 1742989 CGCCTTCAGCGAATG CC-GGGCC-GGAG TGC CGCCTGGCCCCGG TTTTGAGCCGCCGGA Pnap_1648 1743847 - 1743035 - | regulatory proteins, IclR TERM 2113 1743894 - 1743948 + H 100 -13.1 -4.63542 | gap 1, opp_overlap 1743882 1743894 1743895, overlap 1743886 1743896 1743897 AAATCTCGGGTGAAA CCCTTGTTTCGCGCGATAGGCGAACA TTTT TGTTCGTTTATCGCGC-AAACAGCTG TTTTTGGCACTTCTC TERM 2114 1743896 - 1743946 + H 100 -14.3 -3.92577 | gap 1, opp_overlap 1743882 1743895 1743894, overlap 1743894 1743897 ATCTCGGGTGAAACC CTTGTTTCGCGCGATAGGCGAACA TTTT TGTTCGTTTATCGCGC-AAACAGC TGTTTTTGGCACTTC TERM 2115 1743897 - 1743945 + H 95 -17.8 -2.94823 | gap 1, opp_overlap 1743882 1743895 1743894, overlap 1743896 1743894 TCTCGGGTGAAACCC TTGTTTCGCGCGATAGGCGAACA TTTT TGTTCGTTTATCGCGC-AAACAG CTGTTTTTGGCACTT Pnap_1649 1744042 - 1744953 + | shikimate dehydrogenase Pnap_1650 1744973 - 1746154 + | extracellular ligand-binding receptor TERM 2116 1746177 - 1746155 - f 73 -5.5 -4.64763 | gap 1, overlap 1746159 GCAGCGAAAAAATAA GCCACCGGCC CTCG GGCC-GCAGC CAGTCGCATCAGCAC TERM 2117 1746296 - 1746324 + G 90 -15.2 -3.71917 | CTTTTCTCAGGCCTG GCCACCGGCGCG ATCTA CGCGCTGGCGGC TTTGGGCTTTACCCT TERM 2118 1746794 - 1746824 + G 71 -4.7 -4.44974 | gap 1, opp_overlap 1746781 1746789, overlap 1746798 AACACCGAAAGCGCC TCGGTGCTCGGCAT CAAT GTGCCGCGCA-TGA TTTTCTACACTTTCG TERM 2119 1746917 - 1746934 + G 86 -6.9 -5.0133 | opp_overlap 1746931 TTCGACATGGGCGAG GGCCTGG GCAA CAAGGCC TTTTTTGCGGCCATC Pnap_1651 1746260 - 1747135 + | inner-membrane translocator Pnap_1652 1747132 - 1748142 + | inner-membrane translocator Pnap_1653 1748139 - 1748885 + | ABC transporter related Pnap_1654 1748888 - 1749652 + | ABC transporter related Pnap_1655 1749693 - 1750595 + | 4-hydroxyphenylpyruvate dioxygenase TERM 2120 1751306 - 1751362 + G 75 -12.1 -3.66803 | opp_overlap 1751306 GGCGTGCACAGCGAA GCGCTGGCCGCGCTGGTGGCCCGGC TGCACGC GCTGGGCTACCGGGGCGACTACAGC TTTGAGGTGTTCAAC Pnap_1656 1750610 - 1751503 + | xylose isomerase domain-containing protein TERM 2121 1752407 - 1752443 + G 77 -13 -3.61715 | opp_overlap 1752377 CTGCATGGTGGCGCT GGCGGCCAGTGCGC-GCG CGC CGCAGCGCG-TGGCGGCC TTGTTGGCCGCGATG Pnap_1657 1751535 - 1752749 + | 3-carboxy-cis,cis-muconate cycloisomerase Pnap_1658 1752757 - 1753860 + | oxidoreductase domain-containing protein Pnap_1659 1754820 - 1753876 - | LysR family transcriptional regulator TERM 2122 1753980 - 1753957 - G 75 -13.8 -3.07895 | GGCATCCCGAACACA CCCGCGCAGC CAGC GATGCGCGGG GTCGGCATCGAGCCG TERM 2123 1754350 - 1754360 + g 74 -4.6 -4.56597 | overlap 1754340 1754355 CTGCGCGCGCACCTC CGGC GCC GTCG TTTTTCCCACAACGC TERM 2124 1754635 - 1754580 - G 88 -16.6 -3.30124 | CGGCAGGGCGCAGAA CCGCCTGGGCGTCCTGCACGAGCTGG CTGA CCCGCTCGCGCAGCTCGACCGCGCGG GGCGTGGGAACGAGG TERM 2125 1755741 - 1755763 + G 74 -10.5 -3.73775 | opp_overlap 1755753 GGCCTGTTCGTGCGC GCCGAGGCG AAAGC CGCCTCGCC TTTGATCAGACTGGC TERM 2126 1755926 - 1755979 + G 76 -9.5 -4.07568 | overlap 1755908 GCTCGTGCTGTCGGC CGGCCCGTT-TGCCGCCGCGCTGGC CGGCGT GCCGGC-TGGCCGCATGGCGGACCG TTTTGGCGCGCAGCG Pnap_1660 1754898 - 1756430 + | major facilitator superfamily transporter Pnap_1661 1757069 - 1756425 - | hypothetical protein Pnap_1662 1757363 - 1758652 + | metallophosphoesterase TERM 2127 1760776 - 1760741 - g 100 -16.2 -4.15044 | gap 1, overlap 1760721 1760742 1760744 GGCTGGCGCAACAAA TCAGCGCCGCCACGCAG CCG CTGC-TGACGGCGCTGG GCGCGCTGGGCGCGC TERM 2128 1760775 - 1760742 - g 93 -19.7 -3.08812 | gap 1, overlap 1760721 1760741 1760744 GCTGGCGCAACAAAT CAGCGCCGCCACGCAG CCG CTGC-TGACGGCGCTG GGCGCGCTGGGCGCG TERM 2129 1760773 - 1760744 - g 84 -16.5 -3.10244 | gap 1, overlap 1760721 1760742 1760741 TGGCGCAACAAATCA GCGCCGCCACGCAG CCG CTGC-TGACGGCGC TGGGCGCGCTGGGCG TERM 2130 1761184 - 1761171 - g 71 -5.9 -4.24948 | overlap 1761164 GCAGGACAGCGAAAA CGCCG CCCT CGACG CTGCTGGCGCGCTGG Pnap_1663 1758649 - 1762254 + | hypothetical protein Pnap_1664 1762377 - 1762658 + | hypothetical protein TERM 2131 1762797 - 1762813 + F 70 -6.5 -4.13767 | overlap 1762790 GAAGGTTTTGCGCCT TCGCGTC CTT GACGCCA TTTTCAAATCCGGGG Pnap_1665 1762866 - 1763180 + | cytochrome c, class I Pnap_1666 1763185 - 1764477 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2132 1765134 - 1765107 - f 79 -11.3 -3.75863 | AAAACGTGCAGGAAA TCCAGGCCGAC CACAAC GCCGGCCTGAA GGTCGAAGGTATCGT TERM 2133 1765414 - 1765385 - g 75 -3.5 -4.88067 | gap 1 AGTCATGCATAAAAA CCGGATGCC-ATCG CGC CGACAGGCACTCAG TCATACTGCCGCCCT TERM 2134 1765526 - 1765544 + G 77 -13.8 -3.28712 | TCAGGACGCGATGGC GGCGCTGG GTG CCGGCGCC TTGTCCGAAAGCGGC TERM 2135 1765700 - 1765720 + G 78 -6.8 -4.65895 | gap 1 GGCGCTGTTCAATGT GTCGGC-CG CTGT CGAGCCGGC TTTTTCCATCCGCGC Pnap_1668 1765338 - 1765844 + | hypothetical protein TERM 2136 1765846 - 1765857 + F 72 -2.2 -4.83615 | gap 1, opp_overlap 1765822 1765818, overlap 1765835 GTTGCGGCACCTGAC GCGCG GGC CG-GC TTTTTATCCCGAATC Pnap_1669 1765884 - 1766195 + | hypothetical protein TERM 2137 1767455 - 1767432 - g 86 -6.6 -5.02074 | opp_overlap 1767448, overlap 1767434 1767448 CGAGCCGGCAAAAAA GCCGCTGCCT GAGC AAGCCGCAGC GCCTGCTGTCCATCG TERM 2138 1767493 - 1767532 + G 70 -7.7 -3.98236 | gap 1, opp_overlap 1767486 GCAACGCAGAGCCGC CCGGCCGTGGTGCCGGCC GTGCA GGCTGTC-CCAGCGCCGG TTTCTGCTCCAGTTT TERM 2139 1767940 - 1767984 + G 74 -12.6 -3.34895 | overlap 1767941 GACACCCCGGCACGC CGCAACGGCGCCGCACTGGC CGAAC GCCAGCGCGCCGCCGAAGCC TTGATTCAAAATGAC TERM 2140 1767941 - 1767983 + G 80 -16.1 -2.60723 | overlap 1767940 ACACCCCGGCACGCC GCAACGGCGCCGCACTGGC CGAAC GCCAGCGCGCCGCCGAAGC CTTGATTCAAAATGA TERM 2141 1768021 - 1768063 + G 70 -10.5 -3.57144 | gap 1, opp_overlap 1768016 1768059 GTGCAGGACATGATC CGCGATTGGGGC-GCCCGGA TTGT TCCGGGCAGCATCAAGAGCG TTTCACCCTGAGCCG Pnap_1670 1766257 - 1768074 + | DNA polymerase III, subunits gamma and tau TERM 2142 1768467 - 1768447 - g 74 -4.7 -4.62336 | gap 1, overlap 1768448 ACCTCACCGCAAAAA TGCCGGCC CTTCCC GGC-GGCA TGAAATTTCCTTTCT Pnap_1671 1768152 - 1768484 + | hypothetical protein TERM 2143 1768933 - 1768890 - g 73 -8.1 -4.07885 | overlap 1768917 CATCGGCCTGCAAAA GCTGTTTGACCGCGC-CGTCC CCAA GGACGAGCACGGCCAGCC-GC TGCCAGCCGCGTCGC recR 1768513 - 1769139 + | recombination protein RecR Pnap_1673 1771212 - 1769167 - | hypothetical protein TERM 2144 1771255 - 1771239 - H 75 -3.6 -4.84761 | overlap 1771240 ATATGGGTAGAAAAA GCCGAC AGGAA GCCGAC CGGACGGGCATGTTT Pnap_1674 1771358 - 1771690 + | hypothetical protein TERM 2145 1771677 - 1771702 + F 100 -12.6 -5.71712 | gap 1, opp_overlap 1771677 GGATTTTGGTATTAA CCCGCA-CGGG ATGAC CCCGATGCGGG TTTTTTTGTGTACCG TERM 2146 1771702 - 1771677 - f 84 -13.3 -3.14564 | gap 1, opp_overlap 1771677 GGATTTTGGTATTAA CCCGCA-CGGGA TGA CCCCGATGCGGG TTTTTTTGTGTACCG TERM 2147 1771776 - 1771789 + G 73 -3.1 -4.72272 | GGAACGATTACCCCG CATGT CCCG ACGTG TTTTTACTGGCGGCA Pnap_1675 1771696 - 1772811 + | putative signal peptide protein Pnap_1676 1772979 - 1773131 + | hypothetical protein Pnap_1677 1774749 - 1773175 - | lytic transglycosylase, catalytic Pnap_1678 1775516 - 1774746 - | hydroxyacylglutathione hydrolase TERM 2148 1775985 - 1776007 + G 74 -5.4 -4.58685 | overlap 1775969 1775986 1775988 CCCGCCAGCCTGTGG GGTTTGCGCC AGC GGCGCGATCA TTTTTACCAGCGTTT Pnap_1679 1775529 - 1776350 + | methyltransferase type 11 Pnap_1680 1776416 - 1776901 + | ribonuclease H TERM 2149 1777493 - 1777473 - g 82 -11.1 -4.0616 | CAGGCCAACCAGAAA CGCAACCAG GAA CTGGTGGCG CAAAACTTCATCAGC TERM 2150 1777551 - 1777528 - g 71 -9.4 -3.72576 | GCTCGCTCGATGAAA GCGCCGCCAG CCTG CAGGTGGCGC AGGCCAAGCTGGCAT TERM 2151 1778376 - 1778356 - g 78 -3.1 -5.02074 | overlap 1778357 CCATGCCGGAAAAAA TCCCTGCCA GCC CGGCAGCGC GCAATCCCGGCTGAT Pnap_1681 1777086 - 1778390 + | RND family efflux transporter MFP subunit TERM 2152 1778484 - 1778520 + G 73 -11.5 -3.54424 | GGTGTTCGCCACCGT GCTGTCGCTGCTGATCG TGC TGATCGGCGCCGTCAGC TTTAACCGGCTGACC TERM 2153 1778754 - 1778734 - g 78 -6.7 -4.56597 | overlap 1778736 1778737 TTCCGGCTTGAAAAA GACGCCGAC TCC GCCGCCGCC GAAGTGCGCGACCGC Pnap_1682 1778437 - 1781631 + | acriflavin resistance protein Pnap_1683 1783332 - 1781653 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 2154 1782274 - 1782254 - G 75 -14.1 -3.01712 | overlap 1782234 1782263 GCTGGCGGCGCAACA CCGGCAAAA CTG TTTTGCCGG GTGGCCCCGGCCATC TERM 2155 1783277 - 1783307 + g 100 -16.1 -4.07885 | GTCAGACCCAGGTTT CTGCCTGGCCGCG ACCTG CGTGGCCCGGCAG TTTTGACAACACATG Pnap_1684 1784084 - 1783332 - | hypothetical protein TERM 2156 1783713 - 1783737 + g 100 -7.7 -5.47399 | overlap 1783715 GATCCGGTCGCCAAG CTGCGCCAGCC AGG GTCTGGTGCTG TTTTTTTGCGCTTCG TERM 2157 1783715 - 1783735 + g 79 -8.9 -4.36993 | overlap 1783713 TCCGGTCGCCAAGCT GCGCCAGCC AGG GTCTGGTGC TGTTTTTTTGCGCTT Pnap_1685 1784698 - 1784081 - | ECF subfamily RNA polymerase sigma-24 factor TERM 2158 1784992 - 1785006 + H 95 -5 -5.40072 | TTGAAACGATGTTTC TCTGGA TTG TTCAGA TTTTTTTGAAAAAAG TERM 2159 1785510 - 1785477 - g 79 -9 -4.17762 | gap 1, opp_overlap 1785485 CAGCCTGCAAAACAA TGACACCACCGCC CTGGTTGCT GGCGGTG-TGTCA GTGCCCGGCACCAGC Pnap_1686 1785118 - 1785684 + | hypothetical protein Pnap_1687 1787113 - 1785767 - | molybdenum cofactor synthesis domain-containing protein TERM 2160 1786242 - 1786195 - G 81 -13.4 -3.55563 | gap 1, opp_overlap 1786210 1786225, overlap 1786176 ATTTGATGCTTGAAA TGCGGCCCACGGCCAT-CGGCCG GCC CGGCCGCATGGCGATGCGCCAGA AAGCCACGTCGCCGA TERM 2161 1786225 - 1786259 + g 80 -5.5 -4.77036 | opp_overlap 1786195, overlap 1786210 TCGGCCGGCCCGGCC GCATGGCGATGCGCC AGAAA GCCACGTCGCCGAGC TTTTTCATCATCGCC mobA 1787754 - 1787110 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 2162 1787188 - 1787167 - G 86 -8.6 -4.65895 | GTTGGCATTGAAAAA GCCGTGCG CCTCGT CGCCCGGC CGGTCGAAGGGAACG TERM 2163 1787848 - 1787836 - R 71 -10.5 -3.29511 | opp_overlap 1787827 GCCAGGGCCGCAGAA CCGGC TTT GCCGG GCTGCAGGCGCAGCG moaA 1789046 - 1787916 - | molybdenum cofactor biosynthesis protein A TERM 2164 1787943 - 1787991 + g 86 -18 -2.74144 | gap 1, opp_overlap 1787936, overlap 1787947 GTAACTCATTTCCAC CCGCTTGGCGCCGCCTGCCGGGC CGGC GTCCGGC-GGCAGCGCGGCGCGG ATTTCCGAATAGCGG TERM 2165 1787947 - 1787992 + g 85 -14.8 -3.57263 | gap 3, opp_overlap 1787936, overlap 1787943 CTCATTTCCACCCGC TTGGCGCCGC-CTGCCGGGCCGG CGT CCGGC--GGCAGCGCGGCGCGGA TTTCCGAATAGCGGT TERM 2166 1788590 - 1788614 + g 78 -2.8 -5.00616 | overlap 1788583 1788579 1788592 CGGTGACGCGCTGCA GGCCGG-CGTCT TTC AG-CGACCGGGC TTTTTTGGCCAGCAG TERM 2167 1788820 - 1788840 + g 74 -2.5 -4.82901 | overlap 1788823 AAGCTCAGCAGCGAG CTTTGCG GCAGGAA CGCATAG TTTTTGTCAAACACC Pnap_1690 1790337 - 1789189 - | extracellular ligand-binding receptor TERM 2168 1789400 - 1789390 - G 78 -6.8 -4.56597 | overlap 1789391 1789392 CTTGGCGCCCAAAAA GCCT TCC AGGC TGGAAAACGACAAGG TERM 2169 1789745 - 1789779 + g 80 -4.9 -4.8543 | gap 1, opp_overlap 1789744 1789755 AAATCCACAACGGAG CGGGACACC-ACCTTG AGTC CCAGGTCGGTGGCGCG TTTTTGTGCCAGTTC TERM 2170 1790305 - 1790295 - G 93 -2.4 -5.61596 | ACGCGCATAAAAAAA GCCC GCA GGCC ATGGACAAAAAAATT TERM 2171 1790375 - 1790391 + r 72 -12.3 -2.71364 | overlap 1790358 TTGGCTCGGTCATGA CCCTACC TTT GGTAGGG TGATTCGAACCATAG TERM 2172 1790591 - 1790569 - R 71 -9.8 -3.61527 | opp_overlap 1790568 ATTCAAAAATATCAA CTTGGCCATG CCG CACGGCCACG GTCTTGAGCGTCGTG Pnap_1691 1791988 - 1790552 - | aldehyde dehydrogenase TERM 2173 1790923 - 1790910 - G 72 -3.7 -4.56597 | opp_overlap 1790910, overlap 1790911 GGCGCCTGGTAAAAA CCGCC CTCG GGCGC TTCATCGACGATCTG TERM 2174 1791326 - 1791364 + g 83 -15.2 -3.15544 | opp_overlap 1791321 1791320 GCCGGTAAAGCTGAT GTGGTCGATGCCCGGGTG GTG CGCCAGCGCATCGCCCAC TTCATGGCCGTAGCC Pnap_1692 1792492 - 1792034 - | hypothetical protein Pnap_1693 1792878 - 1792507 - | response regulator receiver protein TERM 2175 1792758 - 1792771 + g 74 -5.2 -4.58663 | overlap 1792731 1792755 CCATCGCCAGGCGCA CGGC TTCCTT GCCG TTTTTGGCCAGTCCT Pnap_1694 1795070 - 1792923 - | CheA signal transduction histidine kinases TERM 2176 1793575 - 1793621 + g 76 -5.7 -4.67234 | gap 2, overlap 1793577 1793580 TCTTCGAGTGGCAAG GGCAGGGCCAGCAGCGCGTCGCC AGT GGC--CGCGCCGCTGTCCTTGAG TTTTTGCAGTTCGCT TERM 2177 1793580 - 1793616 + g 71 -10.8 -3.45433 | gap 2, overlap 1793577 1793575 GAGTGGCAAGGGCAG GGCCAGCAGCGCGTCGCC AGT GGC--CGCGCCGCTGTCC TTGAGTTTTTGCAGT TERM 2178 1794021 - 1794033 + g 78 -6.9 -4.60041 | overlap 1794008 GTAGCGGGCCGTGTT CTGGC CCA GCCGG TTTTTGACGGTCAGT TERM 2179 1795300 - 1795323 + r 74 -9.6 -3.65991 | opp_overlap 1795298 CGGGCCTGAAGCAGG CATTCAGCAG GCTG CTGCCGAATG TTCTATTGAGGGGAT TERM 2180 1795427 - 1795467 + r 70 -6.7 -4.13767 | gap 1, overlap 1795428 GCCATCGTGGAAGGC GGCAGCGCCCG-GGCCGC TTGCCC GCCCCCGTGGGCGCTGCG TTTTCAGGTCGGGGA Pnap_1695 1795956 - 1795471 - | thioesterase superfamily protein TERM 2181 1796031 - 1795984 - R 100 -15.1 -4.55118 | gap 2, overlap 1795986 1795988 1796019 GAAGGGTAGAGAAAA TGGATCGAGCCGCCACTTCCGTA CGCG TACGAAAG-GGCGGCTCTA-CCA GAGGGCCAGGCAATG TERM 2182 1796030 - 1795986 - R 89 -16.6 -2.58686 | gap 1, overlap 1795984 1795988 1796019 AGGGTAGAGAAAATG GATCGAGCCGCCACTTCCGTA CGCG TACGAAAG-GGCGGCTCTACC AGAGGGCCAGGCAAT TERM 2183 1796028 - 1795988 - R 86 -15.6 -2.82775 | gap 1, overlap 1795986 1795984 1796019 GGTAGAGAAAATGGA TCGAGCCGCCACTTCCGTA CGCG TACGAAAG-GGCGGCTCTA CCAGAGGGCCAGGCA Pnap_1696 1797120 - 1796137 - | hypothetical protein Pnap_1697 1797893 - 1797177 - | hypothetical protein Pnap_1698 1799648 - 1797909 - | dihydroxy-acid dehydratase TERM 2184 1797991 - 1797967 - G 72 -2.1 -4.78029 | gap 1, overlap 1797968 1797969 TCAAGAAAATCAAAA TCGCAGCCGG TGTCGG CCTGCTG-GA TGTGGCGCGCGCTCA TERM 2185 1798215 - 1798242 + g 82 -15 -3.35046 | gap 1, overlap 1798213 GTAGCTGGTGCCGCT CATGC-GCGCATC CGA GATGCGCAGCATG TCTTTGACGCCCTGC TERM 2186 1798452 - 1798440 - G 91 -9.1 -4.56597 | opp_overlap 1798447, overlap 1798442 GGTGTGCTGGAAAAA CTGCG GCG CGCAG GCGCTGGGCTTGATC TERM 2187 1799246 - 1799224 - G 76 -10.5 -3.84825 | opp_overlap 1799238 1799240 1799241 1799243 GGCATGTAGATGAAA GGCACGCCG GCGCT CAGCGCGCC CAGCACCAGGCCGGG TERM 2188 1799782 - 1799763 - H 76 -12.8 -2.71483 | AGACCGCGTCAACTA CCCCGCCC TAAA GGGCGGAG CTTGAAGTCGAAAGA Pnap_1699 1799994 - 1801439 + | HNH endonuclease TERM 2189 1802072 - 1802062 - g 73 -8.2 -4.09739 | overlap 1802063 GCAAGCTGCTGAAAA GGCG CTG CGCC AGCATCTGGCGGGAA TERM 2190 1802080 - 1802095 + G 71 -8.2 -3.92373 | opp_overlap 1802063 GCTGCGCCAGCATCT GGCGGG AACA CTCGCC TTTGTCGATGACATC Pnap_1700 1801436 - 1802152 + | GntR family transcriptional regulator hppA 1804534 - 1802294 - | membrane-bound proton-translocating pyrophosphatase TERM 2191 1803398 - 1803350 - G 82 -11.1 -4.0641 | gap 2, opp_overlap 1803352, overlap 1803352 1803355 GGCGATGCAGACAAA GATCACCGGCC-AGGCG-GTCGA GCGCA TCGACACGCCCAGGCCGGCAATG ATGTTGGTGCCGTGG TERM 2192 1803396 - 1803352 - G 81 -13.7 -3.6269 | gap 2, opp_overlap 1803352, overlap 1803350 1803355 CGATGCAGACAAAGA TCACCGGCC-AGGCG-GTCGA GCGCA TCGACACGCCCAGGCCGGCAA TGATGTTGGTGCCGT TERM 2193 1803393 - 1803355 - G 79 -15.4 -2.92495 | gap 2, opp_overlap 1803352, overlap 1803352 1803350 TGCAGACAAAGATCA CCGGCC-AGGCG-GTCGA GCGCA TCGACACGCCCAGGCCGG CAATGATGTTGGTGC TERM 2194 1803445 - 1803465 + g 70 -12.5 -2.83164 | GGGCGATGTGCCTGA CCGGCGCGT ACT GCGTGCCGG TGTAGTACTCGGTCA TERM 2195 1803706 - 1803689 - G 75 -4.1 -4.72272 | gap 1, overlap 1803690 1803692 GGCCTTGACGAAAAA GCAGCCGA TGA TCGAC-GC GATGATTGACACCGC TERM 2196 1804571 - 1804599 + H 74 -11 -3.22298 | gap 1, opp_overlap 1804580, overlap 1804575 TTTGCCTTGATGGGT GCCACGCAAGCGG ACCC CCGCT-GCGTTGC TTCCTCGTGGCTCGC TERM 2197 1804748 - 1804760 + H 74 -3.4 -4.92363 | opp_overlap 1804736 1804735 AACTGTCCCGCAGCA GAAC AAGCC GTTC TTTTTATCAATGTTT TERM 2198 1805304 - 1805292 - g 73 -3.3 -4.67607 | overlap 1805293 CTGCCAAGAAAGAAA TTGCC GAC GGCAT TGCCAACTACGCCAA Pnap_1702 1804796 - 1805338 + | inorganic diphosphatase TERM 2199 1805442 - 1805467 + F 100 -9 -5.14563 | opp_overlap 1805442, overlap 1805432 GTTTGCGCATCAAAA GCGTCTTCAG CTCAGT CTGGAGGCGC TTTTTTCATGGGCAA TERM 2200 1805936 - 1805951 + G 81 -4 -5.0133 | gap 1, opp_overlap 1805888 1805936, overlap 1805939 GGTCCGGGGAATGCA CATGGTC ATC GACC-TG TTTTTTCGCACGCTG TERM 2201 1809140 - 1809128 - g 74 -5.5 -4.43477 | opp_overlap 1809127 1809130, overlap 1809129 1809132 GGCACCCAATCAAAA GGTAC CCA GCACC AACATGGGGCTGGGT TERM 2202 1809154 - 1809132 - g 72 -13.4 -2.80479 | opp_overlap 1809130 1809127, overlap 1809128 1809129 CCCAATCAAAAGGTA CCCAGCACCA ACA TGGGGCTGGG TGTGGGTTTGACGCT Pnap_1703 1805475 - 1809701 + | signal transduction histidine kinase with CheB and CheR activity TERM 2203 1810086 - 1810100 + G 86 -12.8 -4.08216 | opp_overlap 1810074 1810071 TGAGCACCTGGCTGG CGCCCG AGC CGGGCG TTTTGACCGGGGTGG Pnap_1704 1809797 - 1810504 + | hypothetical protein TERM 2204 1810538 - 1810505 - T 95 -14 -3.16564 | gap 2, overlap 1810490 1810519 GCGCCAGTCCATTAA GGCCCGGCCATGAACC CGGC GGTTCA-GGCCGG-CC GGGTCGGGTCCGGGT Pnap_1705 1811382 - 1810528 - | hypothetical protein Pnap_1706 1812350 - 1811514 - | hypothetical protein TERM 2205 1811597 - 1811655 + g 78 -14.6 -3.08996 | gap 3, overlap 1811597 1811643 GCGCCATCCACACGC CCAGCGGCAGGT-TTTG-CCGGGT-GCGC CGGG GCGCGGCCCGGGCCACCACCAGCCGCTGG TCTTGCATCAGCATG TERM 2206 1811957 - 1811988 + g 72 -13.6 -2.71712 | gap 1, overlap 1811956 GCGCCCGCAGGCTCA GG-GCGCGCCAGGCG ATG CGGCCGGCGCGCACC ATTTCGCAGGCGACC Pnap_1707 1812718 - 1812389 - | hypothetical protein Pnap_1708 1813971 - 1812715 - | hypothetical protein TERM 2207 1813344 - 1813358 + g 73 -3.4 -4.70613 | overlap 1813343 1813345 CGTCCGCCACCTTGC GCCGCT CCT GGCGGA TTTTCTTGCGCTTTT TERM 2208 1815576 - 1815524 - g 86 -12.1 -4.2349 | gap 3 GCGCTACATGGAAAA CGACCA-GA-GCG-TCGAGGCCGTCG TGGC CGCCGGCTTCGAGCGCGCCGTGGTCG AGCGCGTGGCCCGCC TERM 2209 1815627 - 1815614 - g 71 -9.5 -3.77119 | overlap 1815615 GATCAACGAATACAA GCGCC GGCA GGCGC CGGTCGGCATCCGTG Pnap_1709 1814007 - 1815704 + | NAD+ synthetase TERM 2210 1815775 - 1815789 + G 75 -4.2 -4.72272 | overlap 1815774 TTCAGTCCCCCAGAC TCACTC ATA GAGAGA TTTTTCGTGAAACAA Pnap_1710 1815733 - 1816134 + | nitrogen regulatory protein P-II Pnap_1711 1816752 - 1816141 - | hypothetical protein Pnap_1712 1817162 - 1816749 - | diacylglycerol kinase TERM 2211 1817068 - 1817106 + g 74 -2.2 -4.8543 | gap 1, opp_overlap 1817029 1817070, overlap 1817069 1817070 AGGCCGGCCAGGGAA TAGCCGGCGGCAT-GCC AGACGC GGCTGAGCCCCCGGCGG TTTTTCTGGGGGTTG Pnap_1713 1817691 - 1817191 - | RDD domain-containing protein TERM 2212 1817588 - 1817573 - G 80 -5.4 -4.85822 | gap 1 ATGACAAATACAAAA GCC-TGC AGG GCATGGC GGTTGTCCAGCGCAT TERM 2213 1817838 - 1817791 - R 93 -10.6 -4.431 | gap 1, opp_overlap 1817778 1817791 GATTGAGCGATAAAA CCGGC-CAGCAATGCAGCG CCGGTTTTTAT CGCTGCGGTGCTGTGCCGG GTACGGAAGCCGGCG TERM 2214 1817791 - 1817812 + r 91 -7.9 -4.87665 | gap 1, opp_overlap 1817791, overlap 1817778 GATTGAGCGATAAAA CCGGC-CAGC AAT GCAGCGCCGG TTTTTATCGCTGCGG Pnap_1714 1818550 - 1817816 - | putative transmembrane protein Pnap_1715 1818993 - 1818547 - | putative transmembrane protein TERM 2215 1818957 - 1818969 + g 72 -7.7 -4.15748 | GACCGAAACGGTCTT GCAGA ATG TCTGC TCTTTTTTGAGGTGA Pnap_1716 1819556 - 1818990 - | RNA polymerase factor sigma-70 TERM 2216 1819082 - 1819108 + g 76 -10.8 -3.73775 | opp_overlap 1819078 1819082 CTTCCGAGCAACCCA TGGCTGTGGCCG TTT CAGCCACATCCA TTTCCTCCCAGTAAC TERM 2217 1819918 - 1819902 - g 86 -8.7 -4.62168 | overlap 1819910 ATGGAAATCACAAAA GCGGAAA TTG CTTCCGC AGCGGCAACATCTGC Pnap_1717 1819887 - 1821665 + | acetolactate synthase 3 catalytic subunit TERM 2218 1821664 - 1821676 + F 80 -4.7 -5.09762 | opp_overlap 1821640 GGTCCGAAGACCTCT GAGCG CAT CGCCC TTTTATTTATTCACC ilvH 1821774 - 1822265 + | acetolactate synthase 3 regulatory subunit TERM 2219 1822267 - 1822298 + F 100 -4.4 -6.23317 | gap 1, opp_overlap 1822269, overlap 1822268 1822269 TTCTGCGGGTTTGAA ATTGCCACTGTCCGA GTA TCGGGT-GTGGCAGG TTTTTTTATTTTTAT TERM 2220 1822268 - 1822297 + F 77 -7.9 -4.285 | gap 1, opp_overlap 1822269, overlap 1822267 1822269 TCTGCGGGTTTGAAA TTGCCACTGTCCGA GTA TCGGGT-GTGGCAG GTTTTTTTATTTTTA Pnap_1719 1822336 - 1823352 + | ketol-acid reductoisomerase TERM 2221 1823409 - 1823387 - f 95 -10.5 -4.56597 | opp_overlap 1823387 CCCGTCCTGCAAAAA GCCGCGCGA CGTTC TTGCGCGGC TTTTTCAATGGTGCT TERM 2222 1823387 - 1823409 + F 100 -12.7 -4.68994 | opp_overlap 1823387 CCCGTCCTGCAAAAA GCCGCGCGA CGTTC TTGCGCGGC TTTTTCAATGGTGCT TERM 2223 1823566 - 1823580 + F 74 -2.8 -4.88736 | TTGCGCGCACCAGTC GTGCTT GAG GAGTAC TTTTTATGCATGATG TERM 2224 1823898 - 1823935 + G 93 -9.1 -4.67943 | gap 1 ATTGCCTATGTCTGG GCGCTGA-CCAGCCTGGG CCG CTGGGGCTGGATTGGCGC TTTTGTCTATTGCGC TERM 2225 1824033 - 1824055 + G 91 -9 -4.62002 | overlap 1824034 GGTTTGCCTTCGCCT GCCGCCGCCG CTC TGGTGGCGGG TTTTATCTGGTTGAT TERM 2226 1824034 - 1824054 + G 74 -12.5 -3.36117 | overlap 1824033 GTTTGCCTTCGCCTG CCGCCGCCG CTC TGGTGGCGG GTTTTATCTGGTTGA Pnap_1720 1823586 - 1824398 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 2227 1824495 - 1824521 + F 100 -14.5 -4.5852 | gap 1 TACACCTGATTTCCA CGGCCCGTTTGC ACCA GCAA-CGGGCCG TTTTCATTTGGGTTG TERM 2228 1825475 - 1825502 + G 95 -11.2 -4.46212 | opp_overlap 1825466 1825468 AGCAAATACTGGCTG CCAGTCGCCTGG TGAG CCAGACGACGGG TTTTGTGGTGCAGCC Pnap_1721 1824667 - 1826205 + | 2-isopropylmalate synthase TERM 2229 1826310 - 1826337 + F 91 -7.1 -5.26155 | opp_overlap 1826310 TACTGATTTAAGAAA GTCACGCAA GCGCCTGATA TTGCGTGAC TTTTTCTATTTCTAT TERM 2230 1826337 - 1826310 - f 70 -7.1 -4.2123 | opp_overlap 1826310 TACTGATTTAAGAAA GTCACGCAA GCGCCTGATA TTGCGTGAC TTTTTCTATTTCTAT TERM 2231 1826785 - 1826772 - g 72 -2.3 -4.72272 | opp_overlap 1826773, overlap 1826773 GCTGTTCAGCAAAAA TGACC ATGC GGTCT TGCCTATTGCATCAC TERM 2232 1826915 - 1826896 - g 73 -3.4 -4.70659 | overlap 1826898 GTTGATACCGAAAAA CACAGCCG TTCA CGTCTGAG CGTAGGCGCCACGCT TERM 2233 1827347 - 1827335 - g 83 -7.7 -4.56914 | TGATGCAAACCAAAA TTGCG GGC CGCAA ACTGATCATGGTGTT TERM 2234 1827464 - 1827454 - g 75 -4 -4.7497 | opp_overlap 1827454 GTCACTGATCAAAAA CTTA AGT TAAG TGCTTCGGACAAGCA Pnap_1722 1826401 - 1827492 + | peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 Pnap_1723 1828403 - 1827624 - | regulatory proteins, IclR Pnap_1724 1829255 - 1828494 - | arginyl-tRNA-protein transferase TERM 2235 1828651 - 1828627 - G 83 -7.7 -4.64844 | opp_overlap 1828628, overlap 1828628 CCGAGATAGACAAAA GGCAGGCCGAG CTG CCGGGCCTGCT CTATCTGCCAAAGCA aat 1830034 - 1829252 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 2236 1829644 - 1829671 + g 74 -9.8 -3.72576 | gap 1, opp_overlap 1829641 1829644, overlap 1829645 CCATTTCCGAAACGA TCCAGGTGCCCGC CTG GCCGGC-CCTGGG TTTGCTGGCGCAGGC Pnap_1726 1830713 - 1830084 - | uracil phosphoribosyltransferase TERM 2237 1830180 - 1830197 + g 74 -4.8 -4.56597 | CGCCGCGGTGTAGAT GTCCAC GTCGGG GTGGGC TTTTTGCAAGGCGGC Pnap_1727 1832269 - 1830752 - | protein of unknown function DUF853, NPT hydrolase putative TERM 2238 1832307 - 1832293 - H 74 -10 -3.72576 | TTGGTCCTGATGAAA CTTGCC CAA GGCAAG ACAAGCGAAAAGTAA Pnap_1728 1832364 - 1833089 + | hypothetical protein Pnap_1729 1833128 - 1834420 + | phosphoribosylamine--glycine ligase TERM 2239 1834616 - 1834627 + G 72 -7.2 -4.16943 | AGGGTGTTCGAGCGT GCCG GCTG CGGC TTTTCCCATGTACGG TERM 2240 1834985 - 1835005 + G 73 -3.2 -4.69027 | gap 1, opp_overlap 1834975, overlap 1834988 AAGCACCGGCAGGAG CAGCGCGGC ATAG GCGGCG-TG TTTTTCGATGACTTT Pnap_1730 1834430 - 1835353 + | coproporphyrinogen III oxidase TERM 2241 1835818 - 1835789 - g 71 -8.5 -3.89903 | AAAGATGTCCAGAAA CTGCAGCGCGCCA TTAT TGACGGGCTGGAG GATGTCAAGGCGCAA TERM 2242 1836479 - 1836464 - g 78 -3.2 -5.02074 | GCAGCCGTTAAAAAA GCACCT GCCA AGACGC CGATTGTTAAAATTC Pnap_1732 1835732 - 1836601 + | iojap-like protein Pnap_1733 1836598 - 1837065 + | hypothetical protein Pnap_1734 1837087 - 1837689 + | Maf-like protein TERM 2243 1838183 - 1838171 - g 78 -3.3 -5.00616 | overlap 1838172 1838173 GCGTGTCGCAAAAAA TTCCG CCC CGGCA GCGCGAAGACTTGCG TERM 2244 1839119 - 1839107 - g 71 -9.1 -3.78775 | TTCTGGATGAGGAAA GCCAG CAC CTGGC AAGCCTGAGCGACTT Pnap_1735 1837708 - 1839207 + | ribonuclease Pnap_1736 1839227 - 1839976 + | polysaccharide deacetylase TERM 2245 1840692 - 1840669 - g 77 -2.4 -5.06451 | gap 1, overlap 1840670 GATTACCGGAAAAAA GGCCTTGCAAC CTT GCTG-AAGGCG CTGGCGCAGTTTCCT Pnap_1737 1839973 - 1841184 + | glycosyl transferase, group 1 TERM 2246 1841176 - 1841166 - f 74 -3.2 -4.8622 | GCTTGCAAGTAAAAA CGCT GTC AACG CTCAGTGACTAAAGC Pnap_1738 1841281 - 1841481 + | hypothetical protein Pnap_1739 1842523 - 1841486 - | ISXo7 transposase Pnap_1740 1842594 - 1843079 + | putative transposase TERM 2247 1843477 - 1843447 - f 81 -13.2 -2.93703 | overlap 1843460 AGAACGACCCAGACA GCCGCGCAGCAAAC CGC GTGCGCTGCGCGCC ACAGTGCCCAGGAAG TERM 2248 1843513 - 1843543 + F 70 -9.7 -3.39803 | opp_overlap 1843512, overlap 1843514 1843516 1843534 1843537 CAGCTGGGACATCAC CTACCTGCCCACG CGCGT CATGGGCAGGTAC TTCTACCTGTACCTG TERM 2249 1843514 - 1843542 + F 78 -13.2 -2.6356 | opp_overlap 1843512, overlap 1843513 1843516 1843534 1843537 AGCTGGGACATCACC TACCTGCCCACG CGCGT CATGGGCAGGTA CTTCTACCTGTACCT TERM 2250 1843516 - 1843540 + F 71 -11.4 -2.85712 | opp_overlap 1843512, overlap 1843514 1843513 1843534 1843537 CTGGGACATCACCTA CCTGCCCACG CGCGT CATGGGCAGG TACTTCTACCTGTAC TERM 2251 1843869 - 1843891 + F 73 -9.1 -3.90318 | gap 1, overlap 1843868 TCGAGCATCTGCTGG CG-GCCCGCC AGTG GGTGGGCGCG TTTGTGCACTGGTAC TERM 2252 1844547 - 1844537 - f 70 -3.2 -4.7629 | GTACCAATGGAAAAA CCAA CTC CTGG GTCCTGAAGCTCCCG TERM 2253 1844725 - 1844706 - f 95 -5.6 -5.43866 | gap 1, opp_overlap 1844706 1844718, overlap 1844695 1844694 GAACTGCTAAAAAAA GGCCTGGGC GTC GACC-GGCC TCTCCTGAGCAACCA Pnap_1743 1845660 - 1846151 + | transposase Pnap_1744 1847615 - 1846260 - | putative transposase TERM 2254 1846386 - 1846396 + g 95 -3.2 -5.77853 | GGCGGTCCCGGTGCA TTGG ATG CCAG TTTTTTTTCCCGCTT TERM 2255 1847759 - 1847747 - g 74 -9.1 -3.9461 | CGGGGCGAAGAACAA CGCGA CAT TCGCG AGTTGGGCTACCGCG Pnap_1745 1847696 - 1847941 + | transposase TERM 2256 1848045 - 1848065 + G 83 -15.5 -3.14211 | CAACAGGTGCCCCGG CTCACGCTG CGC CAGCGTGAG TTGCTCAAGAAGCGT TERM 2257 1848136 - 1848108 - g 80 -5.8 -4.78107 | overlap 1848110 GATGAGCAGCAAAAA GGGCTGGCCGTC ATTGA GTCGTCCAGCGC GACTGAGCCGCGCTG TERM 2258 1848528 - 1848561 + G 73 -6.7 -4.2828 | gap 1, opp_overlap 1848524 1848548, overlap 1848509 AGCGGCAGCAAGGCC CGCAGCGCCGGTCTGT CAA ACGAACTGGTG-TGCG TTTTGGTGGCTCGGG Pnap_1746 1847997 - 1848971 + | insertion element protein TERM 2259 1849247 - 1849230 - T 70 -2.7 -4.81551 | overlap 1849241 GATCTATAGTAAAAA TGCAAGA GAAT TTTTGCA GGATTGTCCTGCAAT TERM 2260 1849582 - 1849561 - T 76 -2.9 -5.04597 | opp_overlap 1849561 1849563 1849566, overlap 1849563 ATGGAGATAGAAAAA GTGGACTCA TTTA TGAGTTCTC TTCAATTCCGTTTTT TERM 2261 1850125 - 1850103 - T 85 -9 -4.43477 | TGTACGGAACGAAAA GGCCAGCCCT AAT ACGGCAGGCC CATGACGGTACCGTA TERM 2262 1851236 - 1851256 + T 75 -12.7 -2.53164 | overlap 1851222 1851235 CGCCCATTCTTATCG GCTGTTGTT TAA AACAACAGC ATTGGTCATCAATCC TERM 2263 1851539 - 1851565 + T 75 -11 -3.32516 | opp_overlap 1851538, overlap 1851537 1851533 1851529 1851543 CCTAATTTATTAATG CAAAGTATTCTC TTG GAGAGTGCTTTG TGTTGGTTGATTTAT TERM 2264 1851543 - 1851561 + T 71 -6 -4.28323 | opp_overlap 1851538, overlap 1851539 1851537 1851533 1851529 ATTTATTAATGCAAA GTATTCTC TTG GAGAGTGC TTTGTGTTGGTTGAT TERM 2265 1852326 - 1852315 - T 77 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAATAGATCCT TERM 2266 1853626 - 1853610 - T 70 -2.9 -4.7254 | overlap 1853612 ACTGTTTATTAAAAA CACAGCA CTC TGCTAAG ACGAAAGTCGACGTA TERM 2267 1854875 - 1854840 - T 84 -13.4 -3.14344 | opp_overlap 1854839 GATTTGCTCTATGAA TTCGACGGATTGCTCC GCGT GGAACAATCCGTCAAC AAGTTATGCCTGATG TERM 2268 1855010 - 1855049 + T 100 -16.6 -4.11394 | opp_overlap 1855016, overlap 1855016 GCTCTTATAGCCCCT GAACAAGCCCGGTTGATC ATTA GATTGACCGGGCTTTTTC TTTTGGGGGTGCAGT TERM 2269 1855043 - 1855016 - T 74 -9.8 -3.62224 | opp_overlap 1855010 1855016 ATAGCCCCTGAACAA GCCCGGTTGATC ATTA GATTGACCGGGC TTTTTCTTTTGGGGG TERM 2270 1855016 - 1855043 + T 100 -14.2 -5.45802 | opp_overlap 1855016, overlap 1855010 ATAGCCCCTGAACAA GCCCGGTTGATC ATTA GATTGACCGGGC TTTTTCTTTTGGGGG TERM 2271 1855201 - 1855216 + T 74 -6.8 -4.27443 | GCAGTCTTATATGCG GCCTGT TTGT GCAGGC TTGTTTTCCTGCTGG Pnap_1747 1856449 - 1855409 - | transposase IS116/IS110/IS902 family protein TERM 2272 1855508 - 1855561 + g 75 -13.7 -3.10056 | gap 1 CAGCTTGTTGGCCAA GGCCGCGACCACCACGCTGTAGGGCC TGC GGGCCAGCAGCGCGGTGATC-CAGCC TGTTCGCTGCGTCCT TERM 2273 1855796 - 1855819 + g 76 -13.2 -3.53444 | overlap 1855799 GCCCGGCACCGCCTG CAAGGCCAGC ATAT GCTGGTCTTG TTTGCCCAGCGCTGC TERM 2274 1855799 - 1855816 + g 74 -9.1 -3.90744 | overlap 1855796 CGGCACCGCCTGCAA GGCCAGC ATAT GCTGGTC TTGTTTGCCCAGCGC Pnap_1748 1857888 - 1856821 - | transposase IS116/IS110/IS902 family protein TERM 2275 1857099 - 1857109 + g 76 -6.8 -4.44548 | TCAGACTTGACTTGC CTCC GCT GGAG TTTTGCTTCGGTGTC Pnap_1749 1859373 - 1858093 - | transposase, IS4 family protein TERM 2276 1859788 - 1859776 - g 71 -4.8 -4.4009 | opp_overlap 1859779 GGCCATTGCACAAAA GCTC GCCGT GAGC AGGGGCGTGCTGTAC TERM 2277 1859825 - 1859815 - g 75 -3.2 -4.84529 | GTACAAATGGAAAAA CCAA CTC CTGG GTCCTGAGGCACCCG Pnap_1750 1859498 - 1860886 + | integrase catalytic subunit TERM 2278 1861034 - 1861048 + F 72 -11.4 -3.14708 | overlap 1861032 CTCCCCCTGTTTTTT GCGCCA CAT TGGCGC TCTGGTTTTCATTGG Pnap_1751 1861100 - 1862182 + | transposase IS116/IS110/IS902 family protein Pnap_1752 1863629 - 1862292 - | hypothetical protein TERM 2279 1862434 - 1862421 - G 74 -5.2 -4.56597 | TTTTCGCCCCAAAAA CCCG CCTCGC CGGG CAATCAGCCGGATGA Pnap_1753 1864276 - 1863929 - | ISCc1, transposase OrfB Pnap_1754 1864728 - 1864249 - | transposase Pnap_1755 1865381 - 1864794 - | peptidoglycan-binding LysM TERM 2280 1865379 - 1865361 - G 73 -11 -3.61178 | TGGATTCACTGTAAA GCCTTGGC CTG GCCAAAGC ATGTCAGCACTTTTA Pnap_1756 1866691 - 1865432 - | D-amino-acid dehydrogenase Pnap_1757 1868159 - 1866807 - | amidase Pnap_1758 1868306 - 1869058 + | ribosomal protein S2 TERM 2281 1869115 - 1869081 - f 100 -15.9 -3.59979 | opp_overlap 1869090, overlap 1869062 1869060 1869046 1869082 1869090 TGGCGTTACGCCAAA CGCGAAAAAGGGGCT CGCGT AGCCCCTTTTTCACA ACCCGACAAGATGAA TERM 2282 1869114 - 1869082 - f 91 -17.2 -2.75844 | opp_overlap 1869090, overlap 1869062 1869060 1869046 1869081 1869090 GGCGTTACGCCAAAC GCGAAAAAGGGGCT CGCGT AGCCCCTTTTTCAC AACCCGACAAGATGA TERM 2283 1869106 - 1869090 - f 93 -9.4 -4.70879 | opp_overlap 1869090, overlap 1869046 1869082 1869081 GCCAAACGCGAAAAA GGGGCT CGCGT AGCCCC TTTTTCACAACCCGA TERM 2284 1869090 - 1869106 + F 89 -9.4 -4.56597 | opp_overlap 1869046 1869090 1869082 1869081 GCCAAACGCGAAAAA GGGGCT CGCGT AGCCCC TTTTTCACAACCCGA Pnap_1759 1869188 - 1870108 + | translation elongation factor Ts pyrH 1870170 - 1870880 + | uridylate kinase TERM 2285 1870881 - 1870911 + F 74 -3.1 -4.97888 | gap 1, overlap 1870900 CTGGTCCACGTCTGA CCCAGGC-TGGCGC AAGG GCGCAAAGCCCAGG TTTTTGCATTTTTTT Pnap_1761 1870953 - 1871513 + | ribosome recycling factor Pnap_1762 1871542 - 1872264 + | undecaprenyl diphosphate synthase Pnap_1763 1872282 - 1873112 + | phosphatidate cytidylyltransferase TERM 2286 1874137 - 1874162 + G 71 -6 -4.36914 | opp_overlap 1874140 ACGGCGGTGCTCAAT GCAGCCAACG AGATTG CGGTGGCGGC TTTTCTGGACGGGCG Pnap_1764 1873138 - 1874325 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Pnap_1765 1874327 - 1875703 + | putative membrane-associated zinc metalloprotease TERM 2287 1876089 - 1876077 - g 74 -4.7 -4.57569 | GGACGTGCTGAAAAA GGCGC TTC GCGAC GCCGGTATCGCCGAT TERM 2288 1876518 - 1876535 + G 76 -6.3 -4.53163 | gap 1 TGCGATCACCCTGAA CG-TCACC GAA GGTGAGCG TTTTGTCGTCTCTGG TERM 2289 1877300 - 1877314 + G 72 -2.7 -4.78077 | overlap 1877302 TTGGCGTGCCGTTTA CCGAG ACCGA CACGG TTTATTTTGGTTCCG TERM 2290 1877802 - 1877822 + G 71 -5.4 -4.42386 | opp_overlap 1877802 AGGTGCCGGAAATGA CCGTACCT TGCGT ATGTACGG TTTTGTCGATGCCGG Pnap_1766 1875718 - 1878018 + | surface antigen (D15) Pnap_1767 1878018 - 1878524 + | outer membrane chaperone Skp (OmpH) TERM 2291 1878590 - 1878559 - f 100 -13 -4.63527 | gap 1, opp_overlap 1878552 1878578 GCATGAGCGTAAAAA CGGCAGGCCTG-GCA TGA CGCTCAGGCTTGCCG ACATGACTGAGTTGC TERM 2292 1879618 - 1879598 - g 83 -6.7 -4.88295 | overlap 1879599 AAACAAACTGAAAAA TCCCTGCTG CAA CTGCAGGGC AGCCTAGAAGAAAAA Pnap_1768 1878572 - 1879639 + | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Pnap_1769 1879636 - 1880076 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 2293 1880701 - 1880711 + G 73 -8.2 -4.07568 | overlap 1880699 ATTTCGAAGGCCTTC GCCG GCG CGGC TTTTCGGCCGACCGC Pnap_1770 1880088 - 1880900 + | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase TERM 2294 1881890 - 1881902 + GF 74 -5.5 -4.46212 | opp_overlap 1881890 TTGGCCTGCCCAATA TCCTG TGC CGGGA TTTTGTCGTGCCCGA Pnap_1771 1880908 - 1882104 + | lipid-A-disaccharide synthase Pnap_1772 1882076 - 1882702 + | ribonuclease H TERM 2295 1882691 - 1882709 + F 74 -4.5 -4.74504 | opp_overlap 1882671 GCGCCAGTCGCGCAG GTGTTGC GATGA GCAGCGC TTTTTCCGTTCCCGT TERM 2296 1883180 - 1883201 + G 76 -7.2 -4.27584 | overlap 1883194 GGTCGCCTAAAGTTC TGCGAGCC GGCATG GGCGCGCA TTTTGCCTTGCGCCT Pnap_1773 1882699 - 1883478 + | tRNA/rRNA methyltransferase (SpoU) Pnap_1774 1883634 - 1884815 + | carbamoyl phosphate synthase small subunit TERM 2297 1885305 - 1885289 - g 81 -4.3 -5.00616 | opp_overlap 1885297, overlap 1885290 GGTCTGTGCAAAAAA CGCTGGG TTT CCCAACC GTGATCCGCCCCAGC TERM 2298 1886350 - 1886340 - g 73 -8.2 -4.09685 | overlap 1886341 CGCGATCCGTGAAAA GCGC ATC GCGC TGGGCGTGCGCCCGG TERM 2299 1887709 - 1887669 - g 71 -8.2 -3.95324 | gap 1, overlap 1887676 GACGGTCAAGAACAA CGACAAG-GCGCGCGCC GTGGAAGT GGCGCGTGCGCTGGCCG AACTCAAGTTCGAGC TERM 2300 1887781 - 1887759 - g 86 -16.2 -3.19463 | opp_overlap 1887759 GGCAGCAGCCATCAA CGCCGCCGGC ATT GCCTGCGGCG TCGTCAACAAGGTGA Pnap_1775 1884808 - 1888050 + | carbamoyl-phosphate synthase, large subunit TERM 2301 1888122 - 1888145 + F 83 -12.4 -3.76413 | GGTCGATTCAATATG CCGCTGCCAG GTGA CTGGTGGCGG TTTCGCATTTTGCAG Pnap_1776 1888171 - 1888647 + | transcription elongation factor GreA TERM 2302 1888912 - 1888890 - g 70 -10.6 -3.56325 | opp_overlap 1888911 GCTGCACAAGCACAA GCGGCTATGA AAT TCATAGTCGC CGGGATGTTGCTGGC Pnap_1777 1888647 - 1889087 + | putative transmembrane protein Pnap_1778 1889981 - 1889136 - | methenyltetrahydrofolate cyclohydrolase TERM 2303 1889408 - 1889436 + g 75 -3 -4.82901 | overlap 1889409 CTTTGAGGTCGGCGG TGGCGCTGTGGC AGATG GTCACGGTGGCG TTTTTCTGCAGCAGC TERM 2304 1890031 - 1890007 - R 100 -7.9 -5.26875 | gap 1, opp_overlap 1890030 TTCTCAAGTAAAAAA GCCCGTTAGC GCAGGT GCTA-CGGGC ATGAGGTGCTATTAA Pnap_1779 1890694 - 1890068 - | response regulator receiver protein TERM 2305 1890261 - 1890289 + g 86 -16.7 -3.2396 | TCGCGCGAGGTGAGC TTGGCCAGCAGCG CAT CGCGGCTGGCCGA TTGCTGGTGATCGTT Pnap_1780 1893311 - 1890741 - | multi-sensor signal transduction histidine kinase TERM 2306 1891093 - 1891119 + g 73 -3.6 -4.74801 | overlap 1891086 TGGGCCGTTGGCCGA TGCGACTGGG CAATCGA CTCGGCCGCA TTTTTCATCAGGTTG TERM 2307 1891332 - 1891360 + g 86 -6.5 -5.00616 | overlap 1891311 1891342 GATGCGCTGGATGAT CTGCCCGGCGCGC CAG GCCTGCTTGGCGG TTTTTTCCAGCGCCA TERM 2308 1892462 - 1892421 - G 83 -6.3 -4.88736 | GACCAGCCAGAAAAA GCCGCTGCCCACCAAGCCC TGCG AGGCGCGGTAGCCCTCGGC GCGTATCAAGAGGCC TERM 2309 1893059 - 1893033 - G 80 -14.4 -3.16742 | opp_overlap 1893025 1893043 GCCAATCCGCATCAA CTGCTCCTGCCG CTC CAGCAGGCGCAG CCTCAGGCGTTGCTG TERM 2310 1893539 - 1893525 - H 75 -6.4 -4.56775 | overlap 1893527 ATTTGGGTTTAAAAA CACGTC CTA GACGTA CCCCTGCGCGCTGGC TERM 2311 1896010 - 1896028 + G 79 -11 -3.85698 | CCTGCTGCATCCGCT GGAGACGC CGC GCGTTTCC TTTGTAGCCGAACAA TERM 2312 1896233 - 1896211 - g 77 -13.4 -3.26471 | GCACTTCGAGATCAA CCGCCACTAC ATC GTCGTGGCGG CGCTCAAGGCGCTCA aceE 1893611 - 1896340 + | pyruvate dehydrogenase subunit E1 TERM 2313 1897982 - 1897929 - g 78 -14.5 -3.01712 | gap 1 TGGGCGTGTGCAAGA GCCGCATCGAGCCCGTCTGGGACGGC AAG GCCTTCC-AGCCGCGCCTGATGCAGC CGATGAGCCTGAGCT TERM 2314 1898059 - 1898078 + G 71 -5.6 -4.34402 | overlap 1898049 1898061 1898062 TTACTTTGGCCAGGT TCTGGCGG ATTT CCGCCGTA TTTTCCTGTGACAAC Pnap_1782 1896383 - 1898089 + | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase TERM 2315 1898144 - 1898112 - g 74 -5.4 -4.56597 | gap 1, opp_overlap 1898137, overlap 1898113 GGTCGTGGTCAAAAA GGCGGGTCAGGTGGC CATT GCCGCC-GACACGCT GGTGACCTTTGGCGA Pnap_1783 1898086 - 1898676 + | 20S proteasome, A and B subunits TERM 2316 1899389 - 1899403 + G 73 -7 -4.36914 | CAAGGTCACCGTGGT GCGCGG CTA CGGCGC TTTTGTCGGCGCCAA Pnap_1784 1898673 - 1900538 + | dihydrolipoamide dehydrogenase TERM 2317 1900565 - 1900588 + T 100 -16.8 -4.8048 | opp_overlap 1900565 ATTTCCAATGAAAAA GCCCGAACTG GCAA CAGTTCGGGC TTTTTGCTGTCAGCC TERM 2318 1900588 - 1900565 - T 100 -16.8 -4.86621 | opp_overlap 1900565 ATTTCCAATGAAAAA GCCCGAACTG GCAA CAGTTCGGGC TTTTTGCTGTCAGCC Pnap_1785 1901245 - 1900715 - | hypothetical protein TERM 2319 1901710 - 1901677 - g 75 -3.7 -4.74132 | gap 1, opp_overlap 1901678 1901700 ATACTTCACGAAAAA GCGCTTTGGACTCCGT CAA ACGG-GCGCGAGGCGC TTTTGATTTTTACCG TERM 2320 1901700 - 1901710 + G 88 -8.2 -4.77757 | opp_overlap 1901677, overlap 1901678 GACTCCGTCAAACGG GCGC GAG GCGC TTTTGATTTTTACCG Pnap_1786 1901287 - 1901733 + | pyridine nucleotide-disulphide oxidoreductase dimerisation region TERM 2321 1901791 - 1901759 - T 100 -21.5 -4.78752 | overlap 1901790 ATTACAAGCGAAAAA GCTGCTTGCGCATAC AGC ATATGCGCAAGCAGC TATCGAAAACGAAGC TERM 2322 1901822 - 1901805 - T 70 -9.1 -3.69605 | overlap 1901790 1901801 GCTATCGAAAACGAA GCACCTG AAAC CAGGCGC TGTAGGGAAAACTTA Pnap_1787 1902443 - 1901835 - | NLP/P60 protein Pnap_1788 1902654 - 1903829 + | glucose sorbosone dehydrogenase Pnap_1789 1903901 - 1904704 + | ABC-type transport system ipermease component Pnap_1790 1904723 - 1905754 + | hypothetical protein Pnap_1791 1905751 - 1906464 + | hypothetical protein Pnap_1792 1906461 - 1906763 + | hypothetical protein Pnap_1793 1907021 - 1906803 - | hypothetical protein TERM 2323 1907772 - 1907757 - g 83 -9 -4.36914 | GGCCTGGGCAGAAAA CGGCTT TGGC AAGCCG GCCGAGCGATGAGCG Pnap_1794 1907260 - 1907784 + | hypothetical protein TERM 2324 1908157 - 1908182 + G 88 -4 -5.28176 | gap 3, opp_overlap 1908157, overlap 1908158 CAGGGCATGAATTTA C-CCGCGCCGTGC TCG GC-CGGC-CGGTG TTTTTTGTCGATGAC TERM 2325 1908158 - 1908180 + G 76 -7.7 -4.2748 | gap 2, opp_overlap 1908157, overlap 1908157 AGGGCATGAATTTAC CCGCGCCGTGC TCG GC-CGGC-CGG TGTTTTTTGTCGATG TERM 2326 1908644 - 1908608 - g 72 -2.3 -4.8048 | gap 2, overlap 1908590 GGCCTATACCAAAAA GGCAT-G-GGCGCAGAT TGCCG AGCTGCACCGCGACGCC GCTGACCGGCCCCGG Pnap_1795 1907781 - 1909058 + | putative heat shock protein Pnap_1796 1909881 - 1909102 - | glutaredoxin family protein TERM 2327 1909809 - 1909827 + g 72 -7.4 -4.15222 | overlap 1909812 TCTTGAAGGTGGCTT GAGGGACG TGT TGTCCTTC TTTGTTGGGCAGCAT Pnap_1797 1910038 - 1910532 + | hypothetical protein TERM 2328 1910565 - 1910540 - f 83 -12.6 -3.22476 | gap 1 ACCACTGAGGATCAA GCCCGCTGCCG GCTTG CGG-AGCGGGC CTGAGCAAAGGGCTG Pnap_1798 1910653 - 1911135 + | hypothetical protein TERM 2329 1911199 - 1911177 - f 100 -8.4 -5.63504 | AATGCTATAAAAAAA GGAGCGTATC AAG AATTCGCTCC CGATAATGCGACCGA TERM 2330 1911474 - 1911463 - g 70 -7.2 -4.07885 | CAGCTTTGCCGAAAA GCCC GAAT GGGC CGGCGGCGGCAAGGG Pnap_1799 1911362 - 1911958 + | hypothetical protein TERM 2331 1912397 - 1912381 - g 86 -7.9 -4.75356 | overlap 1912382 AAACACATGCAAAAA CCCCCGG AAC CCGAGGA AGAGGGCCGAAGCAT Pnap_1800 1912039 - 1912662 + | isochorismatase hydrolase Pnap_1801 1913099 - 1912698 - | glyoxalase/bleomycin resistance protein/dioxygenase Pnap_1802 1913593 - 1913168 - | hypothetical protein TERM 2332 1913231 - 1913245 + g 76 -11.4 -3.78934 | opp_overlap 1913219 GTATTTGTCCAGTGC CCGGTC AAA GACCGG TTCTTGTGGCGCCAC TERM 2333 1913453 - 1913438 - G 95 -10.4 -4.59773 | opp_overlap 1913443 1913447, overlap 1913441 TGCGATGCCGAAAAA CAGCGC GGTG GCGCTG CGGCCCAGCGCCTTC TERM 2334 1913447 - 1913465 + g 70 -11.7 -3.23274 | opp_overlap 1913438 1913441, overlap 1913443 GAAAAACAGCGCGGT GGCGCTG CGGCC CAGCGCC TTCAGTTGTGGAAAG Pnap_1803 1915421 - 1913691 - | ABC transporter TERM 2335 1915119 - 1915087 - G 77 -2.6 -5.0133 | gap 2 TAGCGCGCCAAAAAA CGGTCCGTCAGCCAGC GCC GCCAGC-G-CAGCCCG AGCGTGTCGCGCACG TERM 2336 1916776 - 1916760 - g 72 -4.3 -4.56597 | GCGCGTCTTGAAAAA GCAGGAC CCC GCCTTGC TGACGAAATACGATT Pnap_1804 1915717 - 1917630 + | propionyl-CoA synthetase TERM 2337 1917661 - 1917688 + T 100 -12.7 -5.63517 | GGAGGGCGGAGGTGG GGCGCTGGCCA ATCAAA TGGCTGGCGCC TTTTTTATTTCCGCA Pnap_1805 1918247 - 1917738 - | ISSod10, transposase OrfB TERM 2338 1918204 - 1918219 + g 75 -11.8 -3.64822 | overlap 1918214 1918215 GGCCGCGTTCCCTTG CGCGCC CACA GGCGCG TTTGCGTGCCGCGCT Pnap_1806 1918647 - 1918276 - | transposase and inactivated derivative TERM 2339 1918310 - 1918323 + g 100 -2.4 -6.15259 | GCAGCGTTGCTGCGA CTTC CTGGAC GAAG TTTTTTTTTGAATTC Pnap_1807 1919200 - 1918679 - | hypothetical protein TERM 2340 1918831 - 1918875 + g 70 -12 -3.17229 | opp_overlap 1918781, overlap 1918825 1918829 1918832 1918832 CGATCTGTCCGGCCA GCGGCACGTACTTGGCGAGC TGTTT GGTCGCCATGCGCGTGCCGA TCTTGGTGGTGGCCT TERM 2341 1918832 - 1918874 + g 76 -15.5 -2.50016 | opp_overlap 1918781, overlap 1918825 1918832 1918831 1918829 GATCTGTCCGGCCAG CGGCACGTACTTGGCGAGC TGTTT GGTCGCCATGCGCGTGCCG ATCTTGGTGGTGGCC Pnap_1808 1921327 - 1919309 - | ABC transporter related TERM 2342 1920444 - 1920462 + g 77 -2.4 -5.09225 | gap 1 AAGGTGAAGTCGGCT TCG-GCC AGCAGC GGCGCGA TTTTTTCCATACGGT TERM 2343 1920866 - 1920838 - G 71 -13.7 -2.62983 | overlap 1920823 CCGACGGGCACATCA GCGCGCGCGCCAG TTG CAGGCGCATGCGC CAGCCGCCCGAAAAG TERM 2344 1920942 - 1920918 - G 73 -11.3 -3.57144 | overlap 1920882 1920881 TCGCTGAGCTTGAAA CCCAGGCCCAG GAT CAGGGCCTGCG CGCGCGCCTGCGCGT TERM 2345 1921223 - 1921239 + g 83 -5 -5.00884 | overlap 1921224 CTTGCCCGCGCCGTT GCGGCC CACCA GGCCGA TTTTTTCGCCCGGAT TERM 2346 1921286 - 1921310 + g 72 -4.1 -4.60487 | opp_overlap 1921285, overlap 1921288 GCTGTCGAGAATCAC TTTGGCGCCGC GAC GCAGCACCACA TTTTTAAGGGTAATC Pnap_1809 1922307 - 1921411 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Pnap_1810 1923524 - 1922304 - | succinyl-diaminopimelate desuccinylase TERM 2347 1923079 - 1923060 - G 78 -4.8 -4.72272 | GCTGGTGATCAAAAA GGCCATCG ACAG CGCGGGCC GGGGATGCGCCGCCA TERM 2348 1923101 - 1923133 + g 71 -6.1 -4.34402 | opp_overlap 1923099 GCGCCGCCAGGAACT CCTCGACCGCCACGA CCA TGGCGGCAATCGAGG TTTTCATATCCGCCG Pnap_1811 1924674 - 1923532 - | twitching motility protein dapD 1925558 - 1924731 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase Pnap_1813 1926778 - 1925570 - | hypothetical protein TERM 2349 1925815 - 1925805 - G 72 -2.4 -4.70659 | GCCCACAGGTAAAAA CCGG CGT CGGG CAAGGCCACGTCCAT TERM 2350 1928219 - 1928209 - g 78 -6.8 -4.56775 | AGCCTGGCCGAAAAA GCCT TTG AGGC CGAAGAAAAAGCTGA TERM 2351 1928279 - 1928230 - g 83 -4.8 -5.07486 | gap 1 GAGGCCGAAGAAAAA GCTGAACTGCTGGCCGCGCAGCT TGAGG AGCAGCAGGACCAGCTG-CCGGC GCTCGAAGAAGCGCT TERM 2352 1928682 - 1928671 - g 72 -2.2 -4.72272 | overlap 1928672 GCGCTGCAGGAAAAA GTCA GGAC CGAC GGCAAGCTCAGGCCC TERM 2353 1928879 - 1928895 + G 95 -11.5 -4.63218 | GCAAGCCTGAAGGGC CGCCGGC CAA GCTGGCG TTTTATTCGCCGCCG TERM 2354 1929121 - 1929135 + G 71 -5.6 -4.36914 | overlap 1929119 GGCCATGCCGTCACC GCGCAC AGC GTGAGC TTTTATGCGCCCGAC Pnap_1814 1927165 - 1930710 + | chromosome segregation protein SMC TERM 2355 1931787 - 1931810 + G 86 -8 -4.72007 | overlap 1931788 TGCGCGTGAGCTGTC GGCCGGCTCG GTGC TGGGCCGGCG TTTGTTTTCGTGACG TERM 2356 1931788 - 1931809 + G 71 -11.5 -3.42481 | overlap 1931787 GCGCGTGAGCTGTCG GCCGGCTCG GTGC TGGGCCGGC GTTTGTTTTCGTGAC Pnap_1815 1930726 - 1931823 + | ZipA, C-terminal FtsZ-binding region TERM 2357 1931849 - 1931866 + F 100 -10.5 -6.0458 | CCTTAAGGATTCCCG GCGGCCT CAAG GGGCCGC TTTTTTTTGATTTGT TERM 2358 1932358 - 1932339 - g 83 -9.2 -4.25104 | CCTGCGCTACGAAAA CGGCGTGC TGGT GCAGGCCG CCACGCGTGGCGACG TERM 2359 1932600 - 1932636 + G 100 -11.6 -5.08824 | gap 1, overlap 1932583 1932595 CGGCGGCGTGCGCCA GCTCGATCCGGCGTTTG CCGC CGAGCGCCGGCT-GAGC TTTTTTGCCTACGGC TERM 2360 1933124 - 1933075 - g 82 -15 -3.25729 | gap 1, opp_overlap 1933113 CACAACGAGGACGAA GCGCGGCGCAAGGATGTGCGCGT GGGCG ACACGGTCATCGT-GCGCCGCGC CGGCGACGTGATTCC Pnap_1816 1931896 - 1934019 + | DNA ligase, NAD-dependent Pnap_1817 1934450 - 1934031 - | hypothetical protein TERM 2361 1934810 - 1934826 + G 86 -13.7 -3.86897 | TCGGTGCCCGGCCTG CGCGGCA TGG TGCCGCG TTTCTCGCACATCCG Pnap_1818 1934489 - 1935028 + | peptide deformylase Pnap_1819 1937649 - 1935055 - | PII uridylyl-transferase TERM 2362 1935236 - 1935276 + g 80 -6 -4.72272 | gap 2, opp_overlap 1935231 1935228, overlap 1935237 AGGTAAAGCAGCCCG ACCCGGTCGCTGGCCGACAC GCT GAG-CAGCCAGCG-CTGGGC TTTTTCATCCGGGCG TERM 2363 1936143 - 1936107 - G 78 -2.9 -5.00616 | gap 1 GCTGGCGGCAAAAAA GGCGAAC-TTCCTTGC GGCCCA GCTCGGAATGGTCGCC GCCGCGACCCTTGGC TERM 2364 1936281 - 1936264 - G 75 -4.1 -4.72272 | gap 1 CTCGGCCATGAAAAA GCGCCGCA TGT TGCG-CAC CACCATCAGGATGTG TERM 2365 1936498 - 1936537 + g 73 -12.8 -3.15544 | gap 1, overlap 1936459 1936491 GTTCATCACGCCCCG GGCGTTGTACAGCGCGCGC AGG GTGCGCGCCG-ACAGCCCC TTGATGCCGATGGAG TERM 2366 1936806 - 1936844 + g 100 -18.3 -3.57144 | opp_overlap 1936822 GCTTGCTGCCATCAT CGGCGGTGGCCGAAT AGCCAAAGG ATTCGGCTACCGCCG TTTGCAGGTCAAACA TERM 2367 1937512 - 1937536 + g 72 -4.2 -4.56597 | gap 1, overlap 1937514 CCACAGTCGCTGCAA GGTGGTGTCGG TCAG CCGGC-CCAGC TTTTTCAGCAGGCCG TERM 2368 1937704 - 1937682 - R 100 -13.4 -4.14392 | TTGGAAGTTTGAAAA GGCAGTCCCG CAA CGGGACTGGC GTCAGGCGTTGACTT Pnap_1820 1938539 - 1937706 - | methionine aminopeptidase, type I TERM 2369 1938025 - 1938000 - G 75 -13.4 -3.05384 | opp_overlap 1938004 CGGCTCTTCATGGAA TTTGCGGCCA ATGCCG TGGCCGCAAA ATTCGCGCACCACGG TERM 2370 1938231 - 1938257 + g 81 -4.4 -5.01732 | GCCGTCCTTGATGCC GGTCACATCG AGGTTGA CGATGTCGCC TTTTTTCAGCGGCTT TERM 2371 1938773 - 1938755 - H 74 -6.6 -4.26076 | CCACCTTCACCAAAA GGCCACCG CTA CCGTGACC CTGCACCTGACGACT TERM 2372 1940375 - 1940387 + G 70 -10.5 -3.59979 | opp_overlap 1940369 GGTCAACGACGCCGG GCGCG GCG CGCGC TTTGACCTGCGCGCC Pnap_1821 1938768 - 1942790 + | phosphoribosylformylglycinamidine synthase Pnap_1822 1942861 - 1943106 + | prevent-host-death family protein Pnap_1823 1943103 - 1943531 + | PilT domain-containing protein Pnap_1824 1944124 - 1943648 - | putative transposase of insertion sequence ISRm10-1 TERM 2373 1944101 - 1944077 - G 71 -11.4 -3.53012 | gap 1, opp_overlap 1944088 GCCGGCGGGCGCAAA GCCCCGGCAGC GCTG GCC-CCGGGGC GAGCGGCCCCGCGTC Pnap_1825 1944602 - 1944186 - | hypothetical protein TERM 2374 1944999 - 1944965 - R 71 -4.9 -4.59773 | opp_overlap 1944966 1944974, overlap 1944966 GTTGATTTGGAAAAA GCGCAAGTTGCTACC ATAAA GATAGCTGCTTGCGT CCGTTCATATTGCGC Pnap_1826 1945921 - 1945022 - | aldose 1-epimerase TERM 2375 1945755 - 1945723 - G 72 -14.1 -2.79302 | gap 1, overlap 1945709 ACCACGGCCAGCACA CCG-GCACGCCGCC GCGAAT GGCGGCGGGCTCGG GCAGGGCCTCGGGAG Pnap_1827 1946649 - 1945960 - | OmpW family protein TERM 2376 1946254 - 1946264 + g 86 -6.8 -5.00884 | GCCTACAAATGGCCG CCAG GGA CTGG TTTTTTCCAGAAACT Pnap_1828 1948285 - 1946669 - | hypothetical protein TERM 2377 1946732 - 1946702 - G 74 -4.7 -4.57341 | gap 1, overlap 1946703 1946726 1946727 AACCTGCTGGAAAAA TCCG-CGTGCCGCA GCAT TGCAAAACGGCGGA ACCAGCGAGCCGTGG TERM 2378 1946811 - 1946797 - G 76 -12.8 -3.53091 | AGGCGCCTGCCGAAA CGGCGG CGG CCGCCG TGCCGGCCTTGGCCT TERM 2379 1946930 - 1946907 - G 81 -13.1 -3.73953 | AGCACGGTCAGCAAA CCCGCCGGC GGCGCT GCCGGCGAG GGGCTTGACCAGTAA TERM 2380 1948361 - 1948377 + H 80 -10.8 -3.81146 | ATTAACGAACTTGTA CCCGGC AGCAG GCCGGG TTATTACTTAGCCAG TERM 2381 1948830 - 1948875 + G 78 -15.5 -2.71011 | gap 1 GGCTGTGGTTTCTGG GCA-GCGCGGCCATTGCCATGA AGT TCGTGGCGATTGGCGCGCATGC TGCTTGGCCGGAAAT Pnap_1829 1948433 - 1949167 + | hypothetical protein TERM 2382 1949283 - 1949259 - f 71 -5.8 -4.26871 | gap 1, opp_overlap 1949259, overlap 1949255 CAACTCATCAACAAA GTTATCCACAG GATG CTG-GGACAAC TTTAACGCTCGAAAA TERM 2383 1949574 - 1949551 - g 77 -2.2 -5.00616 | overlap 1949552 1949565 TTCTCGCTGAAAAAA TGGCCCAGAC CGAA GCCCTGGCCG CCGCCATGCCGTTCA TERM 2384 1949733 - 1949716 - g 78 -3.3 -5.09225 | gap 1, overlap 1949717 1949718 ACGGCACTGAAAAAA CCGGCAGC GTC GC-GCCCG AAGGGGTGAATGCCG TERM 2385 1949944 - 1949966 + G 93 -8.4 -5.09225 | gap 1 AGCGCATCGTGCATG CCCG-GGGC TCCGGC GCCCACGGG TTTTTTGAATGCCAT TERM 2386 1951708 - 1951695 - g 72 -3.7 -4.56597 | overlap 1951696 1951699 GCGCTGCTTGAAAAA GCAGG CGTG CCGGC CACGCTACCCGACGG Pnap_1830 1949301 - 1951847 + | catalase TERM 2387 1951885 - 1951870 - T 100 -11.8 -5.14563 | opp_overlap 1951870 TTGCCCATGAAAAAA CGCGGC CTTG GCCGCG TTTTTTGCTGGAAGC TERM 2388 1951870 - 1951885 + T 100 -11.8 -5.14563 | opp_overlap 1951870 TTGCCCATGAAAAAA CGCGGC CTTG GCCGCG TTTTTTGCTGGAAGC Pnap_1831 1952702 - 1951911 - | PpiC-type peptidyl-prolyl cis-trans isomerase Pnap_1832 1953087 - 1952788 - | BolA family protein TERM 2389 1953125 - 1953106 - H 83 -10.6 -3.93136 | ATACCTAGCGAGAAA CCTCGGCC TTCA GGCCGGGG AGGGATGGCGTGCAG TERM 2390 1953137 - 1953153 + H 71 -4.3 -4.59853 | GGGGAGGGATGGCGT GCAGCTC GAA GGACTGC TTTTTCAACACTTGA TERM 2391 1953634 - 1953655 + G 70 -13 -2.89742 | overlap 1953627 ACCTGATGCTGGTGC GCGGCCAG TGGTAT CTGGCCGC TGTCTGCGACTTCGA Pnap_1833 1953201 - 1954307 + | IS605 family transposase OrfB Pnap_1834 1954946 - 1954320 - | intracellular septation protein A TERM 2392 1954377 - 1954362 - G 75 -4 -4.72272 | gap 1, overlap 1954364 CTTGTTGAGGAAAAA TG-CCTG CGC CAGGACA AACACCAGCATCAGG TERM 2393 1954771 - 1954751 - G 71 -5.3 -4.42386 | overlap 1954752 CCTTGAGCCACAAAA TCTGCGCCA GCG TGGCGACGA TGACAACCACCGTGG Pnap_1835 1955429 - 1955019 - | methionine-R-sulfoxide reductase Pnap_1836 1956956 - 1955463 - | hypothetical protein TERM 2394 1956384 - 1956412 + g 79 -8.9 -4.36903 | opp_overlap 1956381 1956382 GAAGCGGATAAAGCT CGGCG-CCGTGCG GGTCA CG-ACGGCCGCCG TTTCTATTTCCTCGC Pnap_1837 1957151 - 1958776 + | acyl-CoA synthetase TERM 2395 1958798 - 1958817 + F 100 -10.7 -5.93252 | opp_overlap 1958798 GGCGTCATGATGCAA GGCCCGA CCACCC TCGGGCC TTTTTTATTTTTCAC TERM 2396 1959561 - 1959577 + G 74 -5.7 -4.40358 | overlap 1959563 GTGGTCGGCGGCCTG GGCTCGC TCA GCGGGGC TTTTCTGGCGTCGAT Pnap_1838 1958853 - 1959806 + | inner-membrane translocator TERM 2397 1960070 - 1960084 + G 79 -8.5 -4.2803 | opp_overlap 1960066 CATGCGATGAACCTG GCGGC AAGCG GCCGC TTTTACATTCCGCTG TERM 2398 1960612 - 1960624 + G 74 -4.7 -4.61482 | GCTGTTCACCTTCCT GGGCG GCG CGACC TTCTTTTTTGGCCCC Pnap_1839 1959812 - 1961116 + | inner-membrane translocator TERM 2399 1961615 - 1961641 + G 91 -12.3 -4.25104 | opp_overlap 1961610 CGCTGGAAATCGGCA TCACGATGGCG GGCGG CGCCAGCGTGA TTTTGCTGGACGAGC Pnap_1840 1961113 - 1961913 + | ABC transporter related Pnap_1841 1961915 - 1962610 + | ABC transporter related TERM 2400 1962670 - 1962655 - f 91 -11.8 -4.0896 | AAACCCGCCGCAAAA CCCGGG TAAA CCCGGG GTGAGCAAGCTTTGT TERM 2401 1963247 - 1963202 - g 70 -12.4 -3.17075 | gap 1 CCTGCCCGAAGTCAA GCTCGGCCTGCTGCCGGGCGC GGGCG GCACCCAGC-GCCTGCCGCGC GCCTTGGGCGTGGAG TERM 2402 1963666 - 1963627 - g 73 -11.5 -3.55444 | gap 2, opp_overlap 1963625 TGTTTACGCCTGAAA GCCGCGCGCTGCGGCACAT TTTC ATG-GCCG-AACGCGCTGC CTCAAAAATCCCCGA TERM 2403 1964294 - 1964305 + G 93 -7.2 -5.14563 | overlap 1964291 GATCGAGCAGTACGG CCGC CAGG GCGG TTTTTTGCTCGACGA Pnap_1842 1962822 - 1964921 + | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding TERM 2404 1965508 - 1965492 - g 86 -7.9 -4.7497 | opp_overlap 1965506, overlap 1965496 GCCAGCCAGCAAAAA GCCACCG CCG CGCTGGC TGCCGGCCTGTTCGA TERM 2405 1965758 - 1965747 - g 72 -2.2 -4.7497 | gap 1, overlap 1965748 GTGATGGACGAAAAA GTCGC AGA GCG-C AAAGGCCTCAAGCCG Pnap_1843 1964964 - 1966139 + | acetyl-CoA acetyltransferase TERM 2406 1966691 - 1966664 - g 85 -14.8 -3.61715 | gap 1, overlap 1966627 1966665 CATCCTGGTCAACAA CGCCGGCGCCGCC TGG GGC-GCGCCGGCC GAAGACCATCCGGTC TERM 2407 1966690 - 1966665 - g 86 -18.3 -2.76815 | gap 1, overlap 1966627 1966664 ATCCTGGTCAACAAC GCCGGCGCCGCC TGG GGC-GCGCCGGC CGAAGACCATCCGGT Pnap_1844 1966374 - 1967165 + | gluconate 5-dehydrogenase Pnap_1845 1967170 - 1967613 + | hypothetical protein Pnap_1846 1967729 - 1968745 + | alcohol dehydrogenase TERM 2408 1969343 - 1969393 + G 72 -7.3 -4.13767 | gap 1, opp_overlap 1969351 CGGCTCGGACGTGCG CGCCAACACCACGCGGGCCGTGCC CGAC GGCACGGACGGC-TGGGGCCAGCG TTTTGCCGTGACCGG Pnap_1847 1968768 - 1970420 + | acyl-CoA dehydrogenase domain-containing protein Pnap_1848 1970452 - 1971399 + | putative glutathione S-transferase-related protein TERM 2409 1971457 - 1971480 + G 85 -10.2 -4.30576 | opp_overlap 1971439 CCGCCCAGCTTTATG CCGTGCTGCG GCTG CGCAGCGAGG TTTTCGTGGTCGAGC Pnap_1849 1971396 - 1971845 + | GCN5-related N-acetyltransferase Pnap_1850 1972145 - 1971846 - | hypothetical protein TERM 2410 1972172 - 1972183 + H 87 -2.2 -5.73563 | overlap 1972169 CTCCAGGGGTTTGAA TGGG TTAT TCCA TTTTTTTAATTTAAT TERM 2411 1972627 - 1972638 + G 72 -2.2 -4.7254 | gap 1, opp_overlap 1972627, overlap 1972627 CGTAACGAGTCACAA G-CCG CCT CGGAC TTTTTGATAAAGAAT Pnap_1851 1972603 - 1973391 + | two component LuxR family transcriptional regulator TERM 2412 1973414 - 1973396 - f 73 -8.9 -3.90744 | GGCTTTTCTAAACAA CTTGAGC GTGGG GCTCAAG GTCTGAAGCGGTTTG Pnap_1852 1973437 - 1973772 + | hypothetical protein Pnap_1853 1973826 - 1974431 + | Fis family transcriptional regulator Pnap_1854 1975828 - 1974599 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 2413 1975426 - 1975437 + g 76 -7.2 -4.37886 | overlap 1975415 GCCAGCCGCCCCGAT GCGC CACG GCGC TTTTCTCGGGGATGC TERM 2414 1976192 - 1976226 + r 84 -13.8 -3.11922 | opp_overlap 1976197 1976216, overlap 1976197 AGCCTTATGGGCACT GCAAAGCCTGCTATTT AAA AAATAGTAGGCTTTTC TACTTTTAGATGCTG TERM 2415 1976197 - 1976221 + r 100 -12.3 -4.67635 | opp_overlap 1976197 1976216, overlap 1976192 TATGGGCACTGCAAA GCCTGCTATTT AAA AAATAGTAGGC TTTTCTACTTTTAGA TERM 2416 1976221 - 1976197 - R 71 -10.1 -3.60296 | opp_overlap 1976197 1976192, overlap 1976216 TATGGGCACTGCAAA GCCTGCTATTT AAA AAATAGTAGGC TTTTCTACTTTTAGA Pnap_1855 1976899 - 1976450 - | hypothetical protein TERM 2417 1978598 - 1978580 - g 75 -11.7 -3.54424 | opp_overlap 1978568 TGGCACTGGCTGAAA CCCGTGG TTATT CCACGGG CGGCACGGTCCATCT TERM 2418 1980114 - 1980126 + G 76 -9.1 -4.06419 | opp_overlap 1980114 GGATGAGCCGCAAAA CCAGG GAG CCTGG TTCTTTGTGCAGCAC TERM 2419 1980126 - 1980114 - g 79 -9.1 -4.12188 | opp_overlap 1980114 GGATGAGCCGCAAAA CCAGG GAG CCTGG TTCTTTGTGCAGCAC kgd 1977412 - 1980303 + | alpha-ketoglutarate decarboxylase TERM 2420 1981094 - 1981104 + G 73 -3.2 -4.7254 | ATGGCGTCAAGATCG GCTT CAT GAGC TTTTTCGTCAAAGCT Pnap_1857 1980352 - 1981614 + | dihydrolipoamide acetyltransferase Pnap_1858 1981645 - 1983114 + | dihydrolipoamide dehydrogenase TERM 2421 1983600 - 1983621 + G 71 -5.9 -4.25104 | TGTTTGACAACGGCG TTGGATTTG TCAC CACATCCAA TTTTCATCCGGACCA Pnap_1859 1983134 - 1984237 + | AFG1 family ATPase Pnap_1860 1984462 - 1984881 + | hypothetical protein Pnap_1861 1985649 - 1984891 - | protein phosphatase 2C domain-containing protein Pnap_1862 1985730 - 1985933 + | hypothetical protein Pnap_1863 1985933 - 1987939 + | helicase c2 Pnap_1864 1988726 - 1987902 - | putative transmembrane protein Pnap_1865 1988744 - 1989778 + | RluA family pseudouridine synthase TERM 2422 1989837 - 1989852 + F 70 -6.8 -4.14615 | opp_overlap 1989836 1989837 CAGCATGGATACAAC GCGCTG ACAA TAGCGC TTTTCCCGCCTTTTT TERM 2423 1989912 - 1989889 - g 70 -11.8 -3.20941 | gap 1, overlap 1989887 GACCAATCATGAATA CGACGGATGCG AAG CGCATCC-TCG AAACAGCCCTTATTT Pnap_1866 1989882 - 1990547 + | putative transcriptional regulator TERM 2424 1991333 - 1991318 - g 91 -3.2 -5.50925 | gap 1 AATGAAGAGAAAAAA CGCCTGC TTG AC-GGCG TGACCCTCGACGATG Pnap_1867 1990586 - 1992169 + | pseudouridine synthase TERM 2425 1992438 - 1992470 + G 81 -9.9 -4.16284 | overlap 1992468 GTCGCAAGGCGAGGC GGAAGCTTTTTATGC CGT GCACAAAGAGCGTCC TTTCTTCAAGGATCT Pnap_1868 1992298 - 1992723 + | nucleoside-diphosphate kinase TERM 2426 1992985 - 1992967 - g 70 -8 -4.07568 | GTCGCTGCGCGAAAA GCTGGCCG TCT CGGCCCAC ATTCAGGGACTCAAT TERM 2427 1993043 - 1993079 + G 77 -4.4 -4.82901 | gap 1, overlap 1993030 1993045 GGCACCATCAAATGG CTGTTT-GATGTCGGCG CGGG CGACGTCATCGAAACTG TTTTTATCCCCGAAA Pnap_1869 1992803 - 1993951 + | radical SAM protein TERM 2428 1994708 - 1994698 - g 78 -3.2 -5.05782 | opp_overlap 1994703 AGTCAGCTGAAAAAA CGCT TTG AGCA GTCTCCCGAGGCTGC Pnap_1870 1993948 - 1994754 + | type IV pilus biogenesis/stability protein PilW Pnap_1871 1994765 - 1995694 + | hypothetical protein TERM 2429 1996235 - 1996215 - g 95 -12.5 -4.2828 | CCTGATGGATGAAAA CAGTGCGCG TAG CGCGCCCTG GGATGCACGGCAGGT TERM 2430 1996962 - 1996933 - g 75 -4.2 -4.72333 | gap 1, opp_overlap 1996934, overlap 1996934 AACTACATTGAAAAA CGCTTTGGCG-CG CACGC CGTCGCCCAAGCT TCCTGAACCACATGC ispG 1995694 - 1996968 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 2431 1997693 - 1997669 - g 72 -2.7 -4.8048 | opp_overlap 1997684, overlap 1997671 1997682 TCTCGATACCAAAAA TCCGGCCATGA AAG CCGTGGTCGAA AGCGCGCCACGTCTC TERM 2432 1998175 - 1998195 + G 72 -2.4 -4.77036 | opp_overlap 1998161, overlap 1998160 1998173 1998176 1998180 AGCGGGCCGATGGCA GCGGCGCG CGGTT TGCGCTGA TTTTTGGTGCTGACG Pnap_1873 1996974 - 1998344 + | histidyl-tRNA synthetase TERM 2433 1998398 - 1998380 - f 72 -11 -3.10677 | opp_overlap 1998388 AATCAATCGATTCAA TCCACCCG TCA CGGGTAGA ACTACCAGAGATTTA TERM 2434 1998984 - 1998974 - g 81 -6.8 -4.77036 | GCCGAGTACGAAAAA GCCT ACA AGGC GCTTGACGAGCGTGC Pnap_1874 1998413 - 1999105 + | hypothetical protein Pnap_1875 1999102 - 2000247 + | Pyrrolo-quinoline quinone TERM 2435 2000514 - 2000496 - g 73 -8.1 -4.00868 | GCATTTACAAGGAAA TGGCGAG GCAGA CCCGCCA GGCCGTCGCCGAATC Pnap_1876 2000282 - 2001619 + | small GTP-binding protein Pnap_1877 2001676 - 2001945 + | RNA chaperone Hfq TERM 2436 2002517 - 2002503 - g 82 -3.4 -5.22943 | overlap 2002505 2002506 2002513 ACCAAAGTCAAAAAA CAGCGC CAA ACGCAG CGAAAGCAGCGCGAG TERM 2437 2003039 - 2003026 - g 76 -8.1 -4.11216 | opp_overlap 2003025, overlap 2003029 TTGTGAGTGCTAAAA CAGGC GAAG GCCTG AATTTGCTTCGCGAG Pnap_1878 2001963 - 2003114 + | GTP-binding protein, HSR1-related Pnap_1879 2003180 - 2004595 + | HflK protein TERM 2438 2005265 - 2005236 - g 81 -4.2 -5.09426 | gap 1, overlap 2005237 2005238 CCGAAGGCGAAAAAA TC-CGCGCCGATG CAGAC CGCCAGCGCGAGA TTACCGTGGCCAATG Pnap_1880 2004608 - 2005507 + | HflC protein TERM 2439 2005570 - 2005583 + G 76 -9.5 -4.09117 | GCTGCTGGTGATCGA GGGGC TTCT GCCCC TTATTTCTCCCTCGG Pnap_1881 2005520 - 2005708 + | hypothetical protein TERM 2440 2005821 - 2005835 + F 74 -7.8 -4.11484 | AAACCATCGCCAAGC CCGGTA AAA TGCCGG TTTTAACAGCTTACG Pnap_1882 2005860 - 2007029 + | tRNA synthetase, class II (G, H, P and S) Pnap_1883 2007118 - 2008458 + | adenylosuccinate synthetase Pnap_1884 2008536 - 2009060 + | phosphoribosyltransferase TERM 2441 2009894 - 2009909 + G 74 -9 -3.91144 | opp_overlap 2009883 CGAACAGCGAAGCGC TGCACC TGCT GGTGCA TTTCTGCCATATGCG TERM 2442 2010292 - 2010315 + G 76 -6.6 -4.53303 | opp_overlap 2010263 2010286 2010287, overlap 2010293 GTCGCCAAACCGTGG CCGCACAAGG GCGG CCTGGTGCGA TTTTCTGTCGGCCTG Pnap_1885 2009191 - 2010384 + | cystathionine beta-lyase Pnap_1886 2010453 - 2010641 + | hypothetical protein TERM 2443 2010775 - 2010746 - T 95 -15 -3.57561 | opp_overlap 2010746 GCTGAAGTCCTGAAA CCCGGCATCGCC GTCACT GGTGATGCCGGG TTTTTTGCGTCAAGC TERM 2444 2010746 - 2010775 + T 100 -17.9 -5.08824 | opp_overlap 2010746 GCTGAAGTCCTGAAA CCCGGCATCGCCG TCAC TGGTGATGCCGGG TTTTTTGCGTCAAGC Pnap_1887 2011843 - 2010785 - | tRNA 2-selenouridine synthase Pnap_1888 2012457 - 2011840 - | GDSL family lipase TERM 2445 2012239 - 2012289 + g 71 -5.9 -4.33417 | gap 1 CGGCAGGCGCGAGCG GCCGCCCGAGGTGGTGTCGCC-GC TGAT GCTGGCGTTGACGACTTTGGCGGC TTTGTTCTCGCTGGC TERM 2446 2013062 - 2013094 + G 79 -11.1 -3.96148 | AAGGTGCTGTCGGGC GGTGAGCAGCAGCGC GTG GCGCTGGCGCGCGCC TTTGTCGTCAAGCCG Pnap_1889 2012582 - 2013298 + | ABC transporter related TERM 2447 2014159 - 2014196 + G 70 -7.5 -4.0031 | gap 1, opp_overlap 2014158 TGTGCCTGTATGAAG CGCTGCGCCAGC-GCCGC CCG GCAGCCGCCTGAGCAGCG TTATTTCATAGAAGT Pnap_1890 2013429 - 2014190 + | RNA methyltransferase TERM 2448 2014286 - 2014248 - T 87 -13.9 -3.16055 | gap 1, opp_overlap 2014244, overlap 2014252 CAAACTTCTGATCAA TGAAGCGCGCCA-CCTGC TGCT GCAGGCTGGCCCGCTTCC ACCCATTCATCCCTC TERM 2449 2014282 - 2014252 - T 88 -13.3 -3.39895 | gap 1, opp_overlap 2014244, overlap 2014248 CTTCTGATCAATGAA GCGCGCCA-CCTGC TGCT GCAGGCTGGCCCGC TTCCACCCATTCATC Pnap_1891 2014553 - 2014293 - | hypothetical protein TERM 2450 2014822 - 2014809 - g 73 -3.1 -4.68593 | gap 1, opp_overlap 2014821, overlap 2014810 2014811 GCCAGCATCGAAAAA GCCCAG AAA CTGG-C ATCCGAGGCGGGCTG TERM 2451 2015019 - 2015009 - g 71 -8.2 -3.96068 | overlap 2015010 CCACTGGAAGAACAA GGCC GCC GGCC TGGCGATGCCGCCCA Pnap_1892 2014716 - 2015102 + | cytochrome c, class I Pnap_1893 2015446 - 2015120 - | hypothetical protein TERM 2452 2015768 - 2015795 + r 74 -7 -4.30719 | gap 1, overlap 2015758 2015769 2015781 CGCCGTTCCGGCGTA G-GTCGGAGTCTG GTC CAGGTTCCGGCTC TTTCTTGTGCGACAA TERM 2453 2015769 - 2015793 + r 76 -10.7 -3.75817 | overlap 2015758 2015768 2015781 GCCGTTCCGGCGTAG GTCGGAGTCTG GTC CAGGTTCCGGC TCTTTCTTGTGCGAC Pnap_1894 2016677 - 2015745 - | Ku domain-containing protein TERM 2454 2016705 - 2016724 + r 71 -7.8 -3.93262 | overlap 2016681 TCGCCAGCGGAGGCG GGCGTGTC GTCG GACGTGCC TTTGATGTGTTGCCG Pnap_1895 2017294 - 2016680 - | PfpI family intracellular peptidase TERM 2455 2017789 - 2017808 + G 76 -12.8 -3.41602 | CCATGGCCCGGCTGC CGCCGGCG CCAA TGCCGGCG TTGTCCTGCCCTGGC Pnap_1896 2017502 - 2017972 + | CHRD domain-containing protein TERM 2456 2020294 - 2020264 - g 82 -11.1 -4.0156 | gap 1, overlap 2020261 CCACAGCAACAAGAA CCCGCTG-CGCCGG ATCA CCCGCGACAGCGAG ACGGTGGACATCGTG Pnap_1897 2018240 - 2020624 + | radical SAM domain-containing protein TERM 2457 2020644 - 2020673 + T 100 -16.5 -4.79752 | opp_overlap 2020644 CTTTCAATTTCAGAA GGCCCTGTGTGTC TGCG GATACGCAGGGCC TTTTCTGTTCTTGAA TERM 2458 2020673 - 2020644 - T 80 -12.1 -3.36492 | opp_overlap 2020644 CTTTCAATTTCAGAA GGCCCTGTGTGTC TGCG GATACGCAGGGCC TTTTCTGTTCTTGAA Pnap_1898 2021227 - 2020730 - | hypothetical protein TERM 2459 2021369 - 2021392 + r 100 -13.2 -4.65969 | gap 1, overlap 2021369 2021370 GATAAATCCGAAGGC G-CGTGCGCTG TCC CAGCGCACGAC TTTTCCTTGTTTGTT TERM 2460 2021369 - 2021391 + r 88 -13.4 -3.37141 | overlap 2021369 2021370 GATAAATCCGAAGGC GCGTGCGCTG TCC CAGCGCACGA CTTTTCCTTGTTTGT TERM 2461 2021370 - 2021390 + r 89 -16.9 -2.60658 | overlap 2021369 2021369 ATAAATCCGAAGGCG CGTGCGCTG TCC CAGCGCACG ACTTTTCCTTGTTTG Pnap_1899 2023119 - 2021584 - | filamentation induced by cAMP protein Fic TERM 2462 2022213 - 2022191 - G 76 -6.2 -4.61284 | overlap 2022203 AAGACGAAAGCAAAA CTGGTCAAGG CAC CGATGACCAG CGGACTCTGCACCGG Pnap_1900 2024109 - 2023210 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 2463 2023303 - 2023291 - G 100 -10.5 -4.7373 | opp_overlap 2023291 2023288 GTACGTCAGCAAAAA GGCGG CGA CCGCC TCGTGTGTGGCGGGC TERM 2464 2024154 - 2024125 - R 79 -7.2 -4.49556 | gap 1 TTGCTACTAAATAAA TAGCGGCTTGTGC CTGAT GCACATGC-GCTA GAGGGTCAAATGACT TERM 2465 2024212 - 2024188 - R 70 -2.8 -4.82154 | gap 1, overlap 2024207 AATTTACAGCAAAAA CGCCTCGCTCC ATGA AAAACG-GGCG ACTTTGTCGCCCGTG TERM 2466 2024225 - 2024207 - R 100 -16 -4.72272 | overlap 2024188 TCGCTCCATGAAAAA CGGGCGAC TTT GTCGCCCG TGAAAAGCCGGCCCG TERM 2467 2024253 - 2024232 - R 80 -9.3 -4.07568 | opp_overlap 2024227 2024232, overlap 2024233 TGTCGCCCGTGAAAA GCCGGCCCG CCAC CGGGCCAGG GCTGCTCTATTCGCC TERM 2468 2024252 - 2024233 - R 81 -12.8 -3.04398 | opp_overlap 2024232 2024227, overlap 2024232 GTCGCCCGTGAAAAG CCGGCCCG CCAC CGGGCCAG GGCTGCTCTATTCGC Pnap_1901 2025444 - 2024260 - | 4-hydroxybenzoate 3-monooxygenase Pnap_1902 2025605 - 2026426 + | beta-ketoadipate pathway transcription regulator Pnap_1903 2027172 - 2026438 - | ABC transporter related Pnap_1904 2027933 - 2027169 - | ABC transporter related TERM 2469 2027325 - 2027345 + g 77 -2.6 -5.07107 | gap 2, overlap 2027328 GTCCATGTCGTGCTC GACCAGCAGG ATG CC-G-TGGTC TTTTTTCAGGCTTTG TERM 2470 2027680 - 2027704 + g 81 -4.1 -5.02074 | overlap 2027681 TTGGTCTTCTGGTAG CTGCGGCCCAG CCC CTGGGCGGAAA TTTTTTCCGGGCTCC Pnap_1905 2028942 - 2027926 - | inner-membrane translocator TERM 2471 2028678 - 2028620 - G 100 -3.7 -5.67063 | overlap 2028621 2028624 CGCACGACAAAAAAA CCGATGATGAGCGCCGCCAGCC-CCGAGC CCA GCACGGCGACCGGCAAGGTCCACCA-CAG GCTGACCGGCTCGCC Pnap_1906 2029802 - 2028939 - | inner-membrane translocator Pnap_1907 2031034 - 2029847 - | extracellular ligand-binding receptor TERM 2472 2030947 - 2030921 - G 72 -12.2 -3.28537 | ATAGGGAAGCATGAA GCCCACCCGGAC CTT GCCCGACTGGGC GCGCACGAGTTCGGG TERM 2473 2031114 - 2031142 + r 100 -14.9 -5.00884 | AGTGTAAAACCCGAG CTTTAGGATTAAA TTG TTTAATCCTAAAG TTTTTTGCGAAACGT Pnap_1908 2031689 - 2031195 - | flavodoxin/nitric oxide synthase TERM 2474 2031795 - 2031782 - R 81 -2.3 -5.40474 | ATTGGCTTAAAAAAA TTCCG GACC CGGTA AATAGTGCGATTTTC TERM 2475 2031925 - 2031939 + r 100 -7.8 -5.77988 | opp_overlap 2031925 2031918, overlap 2031918 AAAATCAATAAAAAA GCTCAC TTT GTGGGC TTTTTTTATATCTGT TERM 2476 2031939 - 2031925 - R 100 -5.6 -5.61689 | opp_overlap 2031918 2031925, overlap 2031918 AAAATCAATAAAAAA GCTCAC TTT GTGGGC TTTTTTTATATCTGT TERM 2477 2032064 - 2032089 + r 100 -10.5 -5.60689 | gap 1, opp_overlap 2032064 CATATCACCTCAAAA CCCG-CATGCTT CAT AGGCATGGCGGG TTTTTTGTTGTCTCA TERM 2478 2032089 - 2032064 - R 77 -8.3 -4.16279 | gap 1, opp_overlap 2032064 CATATCACCTCAAAA CCCGC-ATGCTT CAT AGGCATGGCGGG TTTTTTGTTGTCTCA Pnap_1909 2032780 - 2032271 - | ISSod10, transposase OrfB TERM 2479 2032737 - 2032752 + g 75 -11.8 -3.64822 | overlap 2032747 2032748 GGGCGCGTTCCCTTG CGCGCC CACA GGCGCG TTTGCGTGCCGCGCT Pnap_1910 2033342 - 2032809 - | transposase and inactivated derivative TERM 2480 2032843 - 2032856 + g 100 -2.4 -6.15259 | GCAGCGTTGCCGCGA CTTC CTGGAC GAAG TTTTTTTTTGAATTC Pnap_1911 2034707 - 2033448 - | acyl-CoA dehydrogenase domain-containing protein TERM 2481 2034770 - 2034809 + r 71 -4.2 -4.56597 | gap 1, overlap 2034778 AACGGTTGGCGGACG TGGCTTCAGGCCT-GCGCT TTC AGCGCAAAGTCCCAGGCCA TTTTTGCCAGCAGCG Pnap_1912 2035866 - 2034775 - | aminoglycoside phosphotransferase TERM 2482 2035124 - 2035106 - G 70 -10.3 -3.60296 | CAGTGGTAGCTGAAA TCGGCCA GCGGA TGGCCGA GCGTTGACAGTTCCC Pnap_1913 2036622 - 2035897 - | CRP/FNR family transcriptional regulator Pnap_1914 2037756 - 2036977 - | enoyl-CoA hydratase TERM 2483 2037449 - 2037419 - G 95 -10.2 -4.66163 | overlap 2037394 AGCGCCAGCGAAAAA CCGGCGCCGGCGGC CGC GCCTTCGACGGCGG CAATCACCGGCTTGG Pnap_1915 2039320 - 2037758 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 2484 2038112 - 2038082 - G 79 -13.4 -3.53012 | gap 1, opp_overlap 2038091 2038108 GCCGTCGCGGGCAAA CAGCG-CATGCGC CGCATC GCGCATGTCGCTG CGCGTGGCCGGGTTG Pnap_1916 2040343 - 2039336 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Pnap_1917 2040855 - 2040436 - | hypothetical protein TERM 2485 2040858 - 2040842 - G 72 -3.7 -4.62069 | GGCGCATTTGAAAAA CTGATGA TTC TCATGAG AAGAACTCCGGTTTG Pnap_1918 2041696 - 2040992 - | LexA repressor Pnap_1919 2041822 - 2042787 + | asparaginase TERM 2486 2042793 - 2042810 + T 78 -7 -4.60041 | opp_overlap 2042793 GCAGGCATAAAAAAA GCCATC CCGAAA GATGGC TTTTTGACCGTGCAT TERM 2487 2042810 - 2042793 - T 100 -7.7 -5.64274 | opp_overlap 2042793 GCAGGCATAAAAAAA GCCATCC CGAA AGATGGC TTTTTGACCGTGCAT adk 2043490 - 2042834 - | adenylate kinase TERM 2488 2042884 - 2042903 + g 73 -11.4 -3.67 | overlap 2042881 TTTCCTCGACAGTGC CCGTGCCG CTGA TGGCACGG TATTTTGGCGCTTCA Pnap_1921 2044428 - 2043646 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase Pnap_1922 2044618 - 2044436 - | hypothetical protein Pnap_1923 2045630 - 2044599 - | tetraacyldisaccharide 4'-kinase TERM 2489 2044915 - 2044887 - G 83 -5.1 -5.06451 | GAGCATGTCAAAAAA CGCCTCCGGGC TGGCAAT GCCCGCCAGCG CCACCACTGGCTGAT TERM 2490 2045275 - 2045264 - G 82 -5.8 -4.82901 | opp_overlap 2045264 GTTGCGCTACAAAAA CAGG AGCA CCTG TTGCATGCTGGATAA Pnap_1924 2046107 - 2045673 - | biopolymer transport protein ExbD/TolR Pnap_1925 2046727 - 2046104 - | MotA/TolQ/ExbB proton channel Pnap_1926 2047068 - 2048387 + | exodeoxyribonuclease VII, large subunit TERM 2491 2048655 - 2048670 + G 75 -3.2 -4.84359 | CAACAACTCCGCCCA GGTCTG GAAT CACACC TTTTTCTGGAACTGC Pnap_1927 2048446 - 2049027 + | superoxide dismutase TERM 2492 2049072 - 2049056 - T 100 -9.4 -5.00616 | opp_overlap 2049056 TCTTTGCGTAAAAAA GCCGAC TTCAT GTCGGC TTTTTGCTGTCTGGC TERM 2493 2049056 - 2049072 + T 100 -9.4 -4.84527 | opp_overlap 2049056 TCTTTGCGTAAAAAA GCCGAC TTCAT GTCGGC TTTTTGCTGTCTGGC Pnap_1928 2049591 - 2049097 - | hypothetical protein TERM 2494 2049653 - 2049671 + r 74 -7.3 -4.18018 | opp_overlap 2049635 2049654, overlap 2049654 GGCCGCCATGAAAAA AGCCCGC GCTAG GCGGGCA TTTTGACTGAAGCGG TERM 2495 2049670 - 2049654 - R 100 -10.8 -5.14563 | opp_overlap 2049653 2049654, overlap 2049635 GCCGCCATGAAAAAA GCCCGC GCTAG GCGGGC ATTTTGACTGAAGCG TERM 2496 2049717 - 2049732 + r 71 -4.6 -4.56775 | overlap 2049718 GCTTCAGCTTTTCTT GGCAGA GGCT TCAGCC TTTTTGGCGGCAGCT TERM 2497 2049718 - 2049752 + r 74 -7.7 -4.16016 | overlap 2049717 CTTCAGCTTTTCTTG GCAGAGGCTTCAGCC TTTTT GGCGGCAGCTTCGGC TTTCTTGGCGGCTGC Pnap_1929 2050010 - 2049705 - | TolA protein TERM 2498 2049789 - 2049801 + g 83 -4.7 -5.09762 | overlap 2049773 TGCTTTTGCCTTTTT GGCAG CTG CGGCC TTTTCTTTCTTGGCG TERM 2499 2049814 - 2049830 + g 78 -3.6 -5.06816 | overlap 2049814 GCCTTTTCTTTCTTG GCGGCT TTGGC GGCTGC TTTTTCTTCAGCGGT TERM 2500 2050074 - 2050058 - H 70 -8.7 -3.6692 | overlap 2050056 TGTGATTTGAAAACA CCCCGAA CCT TTCGGAG GCCTTACCATAACGA TERM 2501 2050437 - 2050425 - g 77 -4.1 -4.89477 | GCGGCAAGAAGAAAA TCCAC TGG ATGGA AGTGTTTGCCGGTGA TERM 2502 2051085 - 2051049 - g 88 -8.7 -4.8143 | opp_overlap 2051072, overlap 2051050 2051071 2051072 2051074 TCAAGAATCCAAAAA CCGGCAAGGACATCATC ATC AAGGACGTCATTGCCGA CGCCTTCCTGCAGCA Pnap_1930 2050235 - 2051488 + | isocitrate dehydrogenase TERM 2503 2051527 - 2051548 + F 100 -5.8 -5.7946 | opp_overlap 2051527 GGTGCCAAAAACGAA CCCCGC CCCTCTGAAT GCGGGG TTTTTTTATTCCAGA TERM 2504 2051865 - 2051843 - g 71 -9.1 -3.76759 | opp_overlap 2051844 ATCAATTCGAGCAAA CCTGGCTTG CAGCT CAGGCCAGG CAAGCCAGTTCATGA Pnap_1931 2051660 - 2051962 + | hypothetical protein Pnap_1932 2052100 - 2052498 + | RNP-1 like RNA-binding protein TERM 2505 2052576 - 2052601 + F 100 -10.5 -5.72053 | opp_overlap 2052576 2052574 GAGGAAGGCATAAGA GGCTTCGGAAC TTCG GTTTTGAAGCC TTTTTTCTTTGCTTC TERM 2506 2052900 - 2052924 + F 100 -13.6 -5.18357 | gap 1 AACTGGCCGCGCAGA CCGCC-CGGGA GCGA TCCCGAGGCGG TTTTTTCATGCCTTG TERM 2507 2053182 - 2053161 - g 75 -3 -4.89567 | gap 1, overlap 2053162 CCGCAAAAGACAAAA CCACCTCAG ATGTA CC-AGGTGG TGCTGCTCAACGATG Pnap_1933 2052978 - 2053415 + | ATP-dependent Clp protease adaptor protein ClpS TERM 2508 2053725 - 2053740 + G 70 -10.4 -3.5393 | GCGATGATGTCGATA CCCAGC CCAC GCTGGG TTTCCAGCGCGTGAT Pnap_1934 2053496 - 2055832 + | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 2509 2055907 - 2055883 - f 100 -18.6 -4.02534 | opp_overlap 2055883 ACTGAAATCCAGAAA GGCCGGCAGC TTCAC GCTGCCGGCC TTTTTGCATGGCGCT TERM 2510 2055883 - 2055907 + F 100 -18.6 -4.66163 | opp_overlap 2055883 ACTGAAATCCAGAAA GGCCGGCAGC TTCAC GCTGCCGGCC TTTTTGCATGGCGCT TERM 2511 2055933 - 2055969 + F 83 -5.9 -4.8622 | opp_overlap 2055932 2055935, overlap 2055935 GCGCTATAAAAATAG TAGCTGCTTGCGC CCGCGCTGATT GCGCAAACAGCTG TTTTTACTTGAAAAA TERM 2512 2056642 - 2056628 - g 81 -2.7 -5.24129 | GGTTTGCACAAAAAA GCCCG GGTAT CGGCC GAACTGGGTTTGCCC TERM 2513 2056663 - 2056681 + G 86 -7.3 -4.72846 | GGGTTTGCCCGCCAC CGCCCGG ATGGC CCGGCCG TTTTTACATGTCTCG sbcB 2056001 - 2057449 + | exonuclease I Pnap_1936 2058675 - 2057497 - | saccharopine dehydrogenase TERM 2514 2058280 - 2058263 - G 73 -8.3 -4.08767 | TGCAGGCTGTCAAAA CGCCGGC ACAG GTCGGCG GCCACGATGGACACA TERM 2515 2058334 - 2058298 - G 76 -9.4 -4.07124 | overlap 2058299 CACGATGGACACAAA GCCCGGCGCC-AGGCCGC ATT GCGGCATCAGCGCCGA-C TGCGCGCCGGCGGCC Pnap_1937 2058816 - 2059247 + | AsnC family transcriptional regulator Pnap_1938 2059937 - 2059251 - | glutathione S-transferase domain-containing protein TERM 2516 2059282 - 2059304 + g 76 -6.2 -4.65895 | overlap 2059284 2059285 AACCCGACAGGCGCC TGTCCGGCCT GCC AGGGCGGGTA TTTTTCCATCACCCG Pnap_1939 2060889 - 2059939 - | rhodanese domain-containing protein TERM 2517 2060015 - 2060029 + g 73 -3.4 -4.72497 | overlap 2060016 ACCTGGCGCTGGCGT TCGCGG TAG CCGTGC TTTTGTTCGTCGGTG TERM 2518 2061044 - 2061018 - H 72 -12.4 -2.5806 | opp_overlap 2061011 2061009, overlap 2061017 AAACCCGCTTACAAG CCATTTTGTTGC AAT GCAGCAAAATGG TCCGCAATGCTTTAA TERM 2519 2061106 - 2061063 - g 91 -9 -4.59853 | opp_overlap 2061063 2061071 GCAATGCTTTAAAAA GATGCAAAGCC-CCGGCCGT TTTTGC ACGGCCGCTGGCTTT-CACC TTATTCGTCTTCTCA TERM 2520 2061789 - 2061745 - g 72 -13.7 -2.73364 | gap 3, opp_overlap 2061785, overlap 2061720 2061721 GGTGCAGGCCAAGCA CCGGCTCGACA-CCTCGCGCAC CTAT GTG-GCGGGGCTGTCG-GCCGG CGCGGGCCTGGCGGC Pnap_1940 2061041 - 2062342 + | PHB depolymerase family esterase Pnap_1941 2062974 - 2062453 - | hypothetical protein TERM 2521 2063300 - 2063334 + G 71 -10.7 -3.48395 | gap 1, opp_overlap 2063304 ACCGGCGGGCTGGAC GACATCCAGCTGCGCG AACT CGAGCAGC-GGCTGTC TTATCTGCGCGAACT TERM 2522 2064143 - 2064115 - g 77 -13.7 -3.28712 | GGTGTTTGCCGACAA CCTGCGCGACCTG CTG CTGGCCGCGCCGG CCGGCCCGCGCGTGG TERM 2523 2064771 - 2064829 + G 78 -6.7 -4.59773 | gap 2, opp_overlap 2064822, overlap 2064742 2064766 2064765 2064770 GCGCGTTCGGCAGCC GCGC-TGATTTGCTC-AAGGTCACGGGGC TGG GCGCCAAGACCTTCGAGCAAAGCGCGGGC TTTTTGCGCCTGCGC TERM 2524 2065069 - 2065045 - g 79 -9.1 -4.11216 | opp_overlap 2065060, overlap 2065026 GGCCGAGCTGGAAAA GCCGGCCCGCG ACC CGCGCCCCGAC TTCAAGGTGGCGCGC Pnap_1942 2063159 - 2065495 + | RNA-binding S1 domain-containing protein Pnap_1943 2066771 - 2065635 - | iron-containing alcohol dehydrogenase TERM 2525 2065946 - 2065926 - G 76 -6.1 -4.57073 | overlap 2065928 CACGGCCGGCAAAAA CACGGCG TTCAGCG CGCCATG GTGCAGGCGCGGATC TERM 2526 2066372 - 2066395 + g 83 -7.4 -4.56597 | gap 1, opp_overlap 2066375, overlap 2066376 2066379 TGGTGGGAACGGCAA TCAGCGGGGCG GCG CGCCCGG-TGA TTTTTGGCGAGCCGC TERM 2527 2067003 - 2067025 + G 91 -16.3 -3.54424 | opp_overlap 2066964 ATGTGCTCAGCCGCA TGGCGCGCG CCGGT CGCGCGCCA TTTCACACGCTGACG TERM 2528 2067073 - 2067050 - g 70 -12.4 -3.14931 | CTGACGCCGCAGCAA GCCCGCTTGG CCTA CGAAGCGGGC TCAGGCGTGCTGGAA Pnap_1944 2066942 - 2067907 + | alpha/beta hydrolase domain-containing protein TERM 2529 2068734 - 2068746 + T 74 -10.5 -3.53012 | overlap 2068732 CCGGAGATGATTTCC CGCCC ACG GGGCG TTTGCCAGCGGGCAA Pnap_1946 2069836 - 2068883 - | glycine cleavage T protein (aminomethyl transferase) TERM 2530 2069370 - 2069335 - G 72 -11.8 -3.25942 | overlap 2069336 AGGTTTCCAGATCAA TGCCTGCCGCCTGG GGCGCGGG CGAGGCGGCAGGCG CGCACCACAGCGCGC TERM 2531 2069369 - 2069336 - G 77 -15.3 -2.55351 | overlap 2069335 GGTTTCCAGATCAAT GCCTGCCGCCTGG GGCGCGGG CGAGGCGGCAGGC GCGCACCACAGCGCG TERM 2532 2070385 - 2070407 + G 83 -7.6 -4.56597 | opp_overlap 2070374 2070375 AAAAGCTGGGCAAGC CCGGCATCCA TCC TGAAGGCCGG TTTTTCCCCGACACC Pnap_1947 2069925 - 2070932 + | aminodeoxychorismate lyase Pnap_1948 2070935 - 2071717 + | dTMP kinase TERM 2533 2072608 - 2072627 + G 78 -3.5 -5.00616 | gap 1, overlap 2072613 GACATGTGGGCGGTC CGGGTGGG TGCGT CTC-CCCG TTTTTTCAGCGCAAA Pnap_1949 2071714 - 2072835 + | DNA-directed DNA polymerase Pnap_1950 2072859 - 2073239 + | type IV pilus assembly PilZ TERM 2534 2073340 - 2073321 - g 95 -10 -4.45664 | GGAACTCAAGGAAAA CCTGCCTG AAAT CAGGCAAG CCATGCAAACAGCCC TERM 2535 2073740 - 2073729 - g 93 -7.2 -5.0133 | opp_overlap 2073728 2073731, overlap 2073731 CAGCGCTGGAAAAAA CGCG CCCG CGCG TGGCGTTTTTCATTG TERM 2536 2073731 - 2073745 + G 81 -4.2 -5.04356 | opp_overlap 2073729 2073731, overlap 2073728 GCGCTGGAAAAAACG CGCC CGCGCGT GGCG TTTTTCATTGTTTCA TERM 2537 2073784 - 2073767 - g 70 -10.5 -3.64822 | opp_overlap 2073782, overlap 2073771 ATTGTTTCACTGAAA CCCAGGC CGTT GCCCGGG CCGCGCTGGACCTTG TERM 2538 2073853 - 2073866 + G 71 -5.2 -4.4017 | AATGCAGCTGACATT CGGG AGGTCG CCCG TTTTGTGCCGCTTGA Pnap_1951 2073271 - 2074068 + | TatD family hydrolase TERM 2539 2074114 - 2074156 + G 83 -5.4 -5.09225 | overlap 2074117 TGTCTTTCCTGCTGG TTTTTGCAGGCGCTGGCTTG GCG CATGCCGGCTCCTACGATGA TTTTTTCAATGCCAT Pnap_1952 2074065 - 2074736 + | ankyrin Pnap_1953 2076126 - 2074750 - | PAS/PAC sensor signal transduction histidine kinase TERM 2540 2075927 - 2075950 + g 87 -6 -5.19328 | gap 1 ACGCTGAGGATGAAC TGCTGGGACTG CTC CAG-CTCGGCA TTTTTCTTCTCCAGT Pnap_1954 2077593 - 2076136 - | nickel-dependent hydrogenase, large subunit Pnap_1955 2078600 - 2077590 - | NADH ubiquinone oxidoreductase, 20 kDa subunit TERM 2541 2078374 - 2078337 - G 74 -9.7 -3.86202 | gap 1, opp_overlap 2078339, overlap 2078338 GGCCAGCACATGAAA GCGGC-CGCTGCCGTGCG GGC CGCGCAGCAGCGAGCCTT CGATGCACAGCGCAT TERM 2542 2078373 - 2078338 - G 70 -13.2 -2.914 | gap 1, opp_overlap 2078339, overlap 2078337 GCCAGCACATGAAAG CGGC-CGCTGCCGTGCG GGC CGCGCAGCAGCGAGCCT TCGATGCACAGCGCA TERM 2543 2078339 - 2078372 + g 84 -16.7 -3.05384 | gap 1, opp_overlap 2078338 2078337 CCAGCACATGAAAGC GGC-CGCTGCCGTGCG GGC CGCGCAGCAGCGAGCC TTCGATGCACAGCGC Pnap_1956 2080063 - 2078603 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 2544 2080099 - 2080082 - R 77 -11.3 -3.60792 | opp_overlap 2080094 CGGTGAATCGCCAAA TGCCTGG GCGT CCAGGCA TGGGCCAGCTTGTGC Pnap_1957 2081868 - 2080060 - | formyl transferase domain-containing protein TERM 2545 2080571 - 2080550 - G 76 -7.9 -4.38712 | overlap 2080553 GCCAGGGCTAGAAAA GCACCGCCG GCTC CGGCATTGC CGCGCAGCACGGCCA TERM 2546 2081885 - 2081900 + r 80 -4.6 -5.06451 | overlap 2081883 2081898 GCCGCAAGCCCTCCA GCAGCT TGGC AGCCGC TTTTTTCCCCTGGTA Pnap_1958 2082398 - 2081865 - | hypothetical protein TERM 2547 2082305 - 2082337 + g 100 -15.5 -4.30014 | overlap 2082306 GCAAAATGAGCATGG AGCGCGCTGCCGCAT CCA GTCCGGCAGCGCGCA TTTTCAGTTCGTCCC TERM 2548 2082306 - 2082336 + g 93 -19 -3.17526 | overlap 2082305 CAAAATGAGCATGGA GCGCGCTGCCGCAT CCA GTCCGGCAGCGCGC ATTTTCAGTTCGTCC Pnap_1959 2083485 - 2082421 - | hydrogenase expression/formation protein HypE TERM 2549 2083362 - 2083351 - G 72 -4.4 -4.56597 | GCCCTGGCGCAAAAA TTCG TTGT CGAA GGCGGCCAGGAATAG Pnap_1960 2084627 - 2083482 - | hydrogenase expression/formation protein HypD Pnap_1961 2084881 - 2084624 - | hydrogenase assembly chaperone hypC/hupF Pnap_1962 2086089 - 2084872 - | hydrogenase maturation protein HypF TERM 2550 2085452 - 2085436 - G 75 -13.7 -3.05384 | GGCGGCGGCATCGAA CCAGCGC CCG GCGCTGG TGGTGGCCGGGCAGT Pnap_1963 2087081 - 2086095 - | hydrogenase accessory protein HypB Pnap_1964 2087441 - 2087094 - | hydrogenase expression/synthesis, HypA Pnap_1965 2088606 - 2087434 - | hypothetical protein Pnap_1966 2089141 - 2088599 - | hypothetical protein Pnap_1967 2089387 - 2089145 - | rubredoxin-type Fe(Cys)4 protein Pnap_1968 2090250 - 2089384 - | HupH hydrogenase expression protein Pnap_1969 2090777 - 2090268 - | hydrogenase-1 expression HyaE Pnap_1970 2091126 - 2090800 - | hydrogenase assembly chaperone hypC/hupF Pnap_1971 2091805 - 2091134 - | hydrogenase expression/formation protein TERM 2551 2091177 - 2091165 - G 83 -4.7 -5.00616 | opp_overlap 2091173 2091175 GTGGCGGGGAAAAAA CGGTC ATC GCCCG AGCGGCAGGCTTCGG Pnap_1972 2092632 - 2091892 - | Ni/Fe-hydrogenase, b-type cytochrome subunit Pnap_1973 2093238 - 2092648 - | HupE/UreJ protein TERM 2552 2093065 - 2093023 - G 88 -8.8 -4.78107 | overlap 2093025 2093026 2093059 CAGCATCAGCAAAAA GACCGCCGGGCCAGCCAGCC GGC GCCCGGCAGGCAAGGCCGCC ACCGACCAGGCGCCG TERM 2553 2093054 - 2093025 - G 78 -10 -4.00443 | gap 2, overlap 2093023 2093026 GCATCAGCAAAAAGA CCGCCGGGCCAGCC AGCC GGC--GCCCGGCAG GCAAGGCCGCCACCG Pnap_1974 2095136 - 2093280 - | nickel-dependent hydrogenase, large subunit Pnap_1975 2096263 - 2095169 - | hydrogenase (NiFe) small subunit HydA TERM 2554 2096596 - 2096546 - R 74 -9.9 -3.65902 | gap 3, opp_overlap 2096546 2096560, overlap 2096560 TTCAGGCGATGGAAA CGGCGGTGA-TG-CAAGCGCAGCG TTTCTG CGCTGCGCTTGTCAGCCACC-CGG TTTGTCAACCAGAAA TERM 2555 2096546 - 2096596 + r 71 -8.4 -3.85698 | gap 3, opp_overlap 2096546 2096560, overlap 2096560 TTCAGGCGATGGAAA CGGCGGT-GATG-CAAGCGCAGCGT TTCT GCGCTGCGCTTGTCAGCCACC-CGG TTTGTCAACCAGAAA TERM 2556 2096560 - 2096581 + r 87 -13.7 -3.28712 | opp_overlap 2096560 2096546, overlap 2096546 ACGGCGGTGATGCAA GCGCAGCGT TTCT GCGCTGCGC TTGTCAGCCACCCGG TERM 2557 2096581 - 2096560 - R 81 -13 -3.05463 | opp_overlap 2096546 2096560, overlap 2096546 ACGGCGGTGATGCAA GCGCAGCG TTTCTG CGCTGCGC TTGTCAGCCACCCGG TERM 2558 2096642 - 2096620 - R 100 -8.5 -6.02919 | gap 1, opp_overlap 2096620 CCAGAAACAAAAAAA GACACGG-AG TTTC CTGCCGTGTC TTTATAGAACTCATT TERM 2559 2096620 - 2096642 + r 71 -8.5 -3.88559 | gap 1, opp_overlap 2096620 CCAGAAACAAAAAAA GACACGG-AG TTTC CTGCCGTGTC TTTATAGAACTCATT Pnap_1976 2099024 - 2096724 - | von Willebrand factor, type A Pnap_1977 2099833 - 2099036 - | CbbQ/NirQ/NorQ C-terminal domain-containing protein TERM 2560 2099589 - 2099539 - G 88 -14.5 -3.767 | gap 1, overlap 2099540 CATCGAGGTAGCAAA TCGCCCCCTGGC-GGGCGGCCAGC GTCA GCGGGCCGTCCTGCCAGCGGGTGC CGCCGGCGTCCAGCA TERM 2561 2099588 - 2099540 - G 90 -18 -2.85699 | gap 1, overlap 2099539 ATCGAGGTAGCAAAT CGCCCCCTGGC-GGGCGGCCAGC GTCA GCGGGCCGTCCTGCCAGCGGGTG CCGCCGGCGTCCAGC Pnap_1978 2101265 - 2099886 - | ribulose bisphosphate carboxylase Pnap_1979 2102309 - 2101392 - | LysR family transcriptional regulator TERM 2562 2101977 - 2102025 + g 88 -8.9 -4.72272 | opp_overlap 2101987 2101989 CCGCACCAGCAGCAT GGGCACGAAAT-ACTTGGCCGTG CTGAC CACGGCCAGGTCGATGCG-GCCC TTTTTCATGCCCACA TERM 2563 2102013 - 2101989 - G 71 -11.4 -3.45324 | opp_overlap 2101977, overlap 2101987 CATGGGCACGAAATA CTTGGCCGTG CTGAC CACGGCCAGG TCGATGCGGCCCTTT TERM 2564 2102519 - 2102507 - g 74 -10.5 -3.70902 | overlap 2102508 TGGCCGACACCGAAA GCGCG CAC CGCGC GGCGTTCAACCAGGC TERM 2565 2103155 - 2103179 + G 74 -9.9 -3.77264 | overlap 2103156 2103159 TGCACGCCTGGCATG CCGAGGCGCCG GCC TGGCGCCTTGC TTCTTCCCTGTTTTC TERM 2566 2103156 - 2103178 + G 74 -13.4 -2.85274 | overlap 2103155 2103159 GCACGCCTGGCATGC CGAGGCGCCG GCC TGGCGCCTTG CTTCTTCCCTGTTTT TERM 2567 2103159 - 2103175 + G 73 -11.5 -3.55304 | overlap 2103156 2103155 CGCCTGGCATGCCGA GGCGCCG GCC TGGCGCC TTGCTTCTTCCCTGT Pnap_1980 2102443 - 2103204 + | HAD family hydrolase Pnap_1981 2103214 - 2103924 + | ribulose-phosphate 3-epimerase TERM 2568 2104204 - 2104189 - g 74 -2.6 -4.94992 | gap 1 CGAAACCCAGAAAAA GCTCGAT GTC ATC-AGC AACCAGTATTTCACC TERM 2569 2104419 - 2104443 + G 84 -11.3 -4.15044 | overlap 2104420 AGGAGGCGGTGGAGA GCGGCCGCGAC GTG GTCGAGGCCGA TTTCTTCCAGCCCGG TERM 2570 2104420 - 2104442 + G 78 -14.8 -3.08812 | overlap 2104419 GGAGGCGGTGGAGAG CGGCCGCGAC GTG GTCGAGGCCG ATTTCTTCCAGCCCG TERM 2571 2104769 - 2104780 + G 75 -3.6 -4.82901 | overlap 2104745 2104744 CACCGCATCCTGATG CGCG GCGG CGTG TTTTTGTACCCGCGC TERM 2572 2104997 - 2104969 - g 72 -4.3 -4.56597 | TTTCGGCTCGAAAAA CGAGGTCGAGCGC ATC GAGCGCTACCACG CCGAACCGGCCAGGG Pnap_1982 2103968 - 2105062 + | inositol phosphatase/fructose-1,6-bisphosphatase TERM 2573 2105080 - 2105114 + F 87 -8.5 -4.59511 | opp_overlap 2105111, overlap 2105066 2105081 TGCTATTTATTCGAT AGCTGATTGCGCATG CCAGC CGTGCGCAAACGGCC TTTTTGACCCATATT TERM 2574 2105081 - 2105113 + F 80 -12 -3.34984 | opp_overlap 2105111, overlap 2105066 2105080 GCTATTTATTCGATA GCTGATTGCGCATG CCAGC CGTGCGCAAACGGC CTTTTTGACCCATAT Pnap_1983 2105150 - 2106034 + | phosphoribulokinase Pnap_1984 2106056 - 2108137 + | transketolase TERM 2575 2108275 - 2108239 - g 70 -13 -2.92371 | overlap 2108234 ACGCAGTGAACGACA CGCTGCGCCGCTTCGA CCTGC CCGAAGTGACGCAGCA GCAGGTCAACGACTG TERM 2576 2108442 - 2108417 - g 71 -11.1 -3.41051 | gap 1, opp_overlap 2108418, overlap 2108418 CGACCGCTACTACAA GCGCCGCTGCGG CAG CCGCAGCCGC-C TGTATCCGCAGGTGC TERM 2577 2108641 - 2108672 + G 79 -10.8 -3.87869 | gap 1, opp_overlap 2108611 TCCACAGCTGCCTGA CGGCGTTCGGCGTGC CGC GCGCG-CGGGCGCTG TTTGTCGGCGATTCG Pnap_1985 2108151 - 2108822 + | phosphoglycolate phosphatase TERM 2578 2109178 - 2109192 + G 79 -11.4 -3.85698 | overlap 2109174 GCCGACGTGGTGCTG GAGGCC ACC GGCCTC TTTCTGGACAAGGCC TERM 2579 2109442 - 2109402 - g 70 -11.9 -3.16055 | gap 2, overlap 2109391 2109392 CAAATGGGGCATCAA GCGCGGCCTGATGACCACG GTGCA CGCGGCCA-C-GGCCACGC AAAAGACCGTTGACG Pnap_1986 2108893 - 2109909 + | glyceraldehyde-3-phosphate dehydrogenase, type I Pnap_1987 2109906 - 2111108 + | phosphoglycerate kinase TERM 2580 2111088 - 2111101 + F 81 -6.7 -4.74132 | opp_overlap 2111095 ATTCTGCAGCAGCAC GCTGA AACA TCAGC TTTTTGATGCGCTAT TERM 2581 2112144 - 2112120 - g 83 -5 -5.08824 | overlap 2112098 2112123 CTGGCAGCCAAAAAA GCAGCCA-GCAG CAT CTGCACGGC-GC GCTTCGAGGCCTTTG Pnap_1988 2111190 - 2112206 + | fructose-1,6-bisphosphate aldolase Pnap_1989 2113694 - 2112300 - | integrase catalytic subunit Pnap_1990 2114871 - 2113858 - | hypothetical protein TERM 2582 2114419 - 2114437 + g 78 -10.3 -4.07568 | overlap 2114422 CTGACTGAGCCGTTC CAAGGCC TCTTC GGCCTTG TTTTCGGCAGCACGC TERM 2583 2115542 - 2115568 + G 78 -5.1 -4.68593 | gap 1, opp_overlap 2115536, overlap 2115540 GCGATGACACGCTGC GCGGC-AGGCGT GACC GTGCCTTGCTGC TTTTTGCCTGGTCCA Pnap_1991 2114995 - 2116071 + | phage integrase family protein TERM 2584 2116089 - 2116100 + F 71 -5.8 -4.28774 | overlap 2116079 2116098 ATCCTGCGGCTCAAG CCAC TTTG GTGG TTTTCCGTTCACTGG Pnap_1992 2116186 - 2117121 + | putative signal peptide protein Pnap_1993 2117340 - 2119529 + | catalase Pnap_1994 2120503 - 2119577 - | putative adenylate/guanylate cyclase Pnap_1995 2120695 - 2121036 + | hypothetical protein Pnap_1996 2122033 - 2121074 - | muramoyltetrapeptide carboxypeptidase TERM 2585 2121841 - 2121876 + g 71 -9.6 -3.78775 | overlap 2121871 GCGCCACATCGGCGC CGCTGCTGGCTGCC CGGTGAAT GGCGGCAAGCCGCG TTTCATCGTCGCCGG Pnap_1997 2123289 - 2122054 - | CMP/dCMP deaminase, zinc-binding Pnap_1998 2123603 - 2123355 - | hypothetical protein TERM 2586 2123499 - 2123532 + g 74 -5.1 -4.58395 | overlap 2123494 CACCGGATTCTGCGG GCGGACCGGCGCTTT GGAC AAGGCGCCCAACTGC TTTTTAGCCAATACG Pnap_1999 2123759 - 2124169 + | hypothetical protein guaA 2125852 - 2124230 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 2587 2125914 - 2125893 - R 100 -15.9 -5.75538 | GTCAAAAAAGAAAAA GGGCGTCTG CCAC CAGACGCCC AGGATGCTTGGATAA Pnap_2001 2127402 - 2125933 - | inosine-5'-monophosphate dehydrogenase TERM 2588 2127156 - 2127187 + g 74 -2.2 -4.83615 | gap 1 AGCGCTTGACCTTGG CCACATG-CGCGG CCTGCTC CTGCGGCGTGAGG TTTTTATGAACAATG TERM 2589 2127527 - 2127517 - g 75 -3.2 -4.9218 | CATTCAGCATAAAAA GTGC GCG ACAC GGAGATACACTTTCA TERM 2590 2127920 - 2127909 - g 91 -5.8 -5.27779 | CGGAAGAGGAAAAAA TGGC AAAG GCCA GGGCCGACAATTGCG Pnap_2002 2127467 - 2128087 + | hypothetical protein Pnap_2003 2128474 - 2128109 - | hypothetical protein Pnap_2004 2128907 - 2128461 - | cyclase/dehydrase smpB 2128979 - 2129536 + | SsrA-binding protein Pnap_2006 2130695 - 2129568 - | enoyl-CoA hydratase TERM 2591 2130445 - 2130432 - G 83 -5.2 -5.00616 | CGCCTGGTGAAAAAA GCGG ATATCG CCGC CCGCGCAAAAACAGC TERM 2592 2130471 - 2130457 - G 78 -7.1 -4.56597 | opp_overlap 2130462 2130466, overlap 2130459 2130467 CCGCCCGCGCAAAAA CAGCC GAACA GGCTG TCGGGCGTTCCCGGA Pnap_2007 2131567 - 2130692 - | hypothetical protein TERM 2593 2131595 - 2131614 + r 89 -13.6 -3.57309 | opp_overlap 2131595, overlap 2131612 GCGAACGATAAAAAA GGCCACTG CGTG CAGTGGCC TTTGGCGGGCTTTTG TERM 2594 2131614 - 2131595 - R 100 -13.6 -5.37345 | opp_overlap 2131595 2131612 GCGAACGATAAAAAA GGCCACTG CGTG CAGTGGCC TTTGGCGGGCTTTTG Pnap_2008 2133490 - 2131667 - | GTP-binding protein TypA Pnap_2009 2134569 - 2133526 - | tRNA pseudouridine synthase B TERM 2595 2133737 - 2133700 - G 76 -6.1 -4.62069 | gap 1, overlap 2133701 2133723 GGCCGAGCCTAAAAA TGCCGCCGGTTCGCGGCC ATA GACCT-GCACCAGCGGCG CGTCATCGCCCCACT Pnap_2010 2135025 - 2134657 - | ribosome-binding factor A TERM 2596 2135100 - 2135062 - R 91 -12.3 -4.07687 | opp_overlap 2135062 2135063, overlap 2135063 2135065 AGTCCTGGTTTAAAA CCAGCAGTCCGCCAGCC GTCAA GGCAGGCGGACCACCGT GTTCTTACAAGGTCC TERM 2597 2135099 - 2135063 - R 93 -15.8 -3.04398 | opp_overlap 2135063 2135062, overlap 2135062 2135065 GTCCTGGTTTAAAAC CAGCAGTCCGCCAGCC GTCAA GGCAGGCGGACCACCG TGTTCTTACAAGGTC TERM 2598 2135097 - 2135065 - R 91 -14.8 -3.08032 | opp_overlap 2135063 2135062, overlap 2135063 2135062 CCTGGTTTAAAACCA GCAGTCCGCCAGCC GTCAA GGCAGGCGGACCAC CGTGTTCTTACAAGG Pnap_2011 2138083 - 2135105 - | translation initiation factor IF-2 TERM 2599 2135305 - 2135289 - G 71 -9.4 -3.72576 | overlap 2135293 TTGCCGCGCAGCAAA CGCACC TTGGC GGTGCG GCGAACCACACCGGC TERM 2600 2135377 - 2135394 + g 76 -6.3 -4.4078 | gap 1, overlap 2135379 TGAAGATATTGCGAA TC-TCGGC ATT GCCGATGA TTTCTTCCTTCTTGT TERM 2601 2136957 - 2136988 + g 91 -3 -5.4505 | gap 2, opp_overlap 2136946 AAATTGCCGCGACCG GGCACCACCGGAGC GCCACG GCTC-GG-GATGCC TTTTTTCTTGGCGGC TERM 2602 2137597 - 2137625 + g 72 -7.3 -4.21676 | CACGGGCCGCTTCCT GCGCGGCCTGC TCATCAC GCAAGCGGCGC TTTTCCGTCAGTTCT TERM 2603 2137859 - 2137892 + g 74 -4.6 -4.62069 | gap 1 TGAGTCCGCCTGCTT GATCTCGCTGGTTGA CTTTT TCA-CCAGGGTGATC TTTTTGCGGTCAGCA Pnap_2012 2139632 - 2138112 - | NusA antitermination factor TERM 2604 2138265 - 2138282 + g 73 -12.7 -3.11732 | opp_overlap 2138278, overlap 2138256 ATCGGCCAGGTCGTC GCGGGTG GCAA CACCCGC TTCGGTCAATTTGGC TERM 2605 2139235 - 2139215 - G 82 -6.1 -4.82901 | CGGTGCCGACAAAAA TCTTGTCAC CGC GCGACATGA AGTCGTTGAGCAGCA TERM 2606 2139259 - 2139271 + g 78 -3.3 -5.02074 | overlap 2139254 AGCAGCATTTCGCGC TCGGC GTC GCGGA TTTTTTGCAGGATGA TERM 2607 2139569 - 2139582 + g 90 -2.3 -5.40072 | opp_overlap 2139569 CGGCGCCAAAGACGA CGTCG CGTT CAACG TTTTTTTCACGCGAG Pnap_2013 2140263 - 2139655 - | hypothetical protein TERM 2608 2140340 - 2140322 - R 91 -7.4 -4.85782 | opp_overlap 2140335, overlap 2140335 GTGTGCAAAAACAAA CGCCCA AAAAAAA TGGGCG GTGAAAACCCGCCCA TERM 2609 2140335 - 2140355 + r 76 -9.7 -3.81951 | opp_overlap 2140322 2140335 2140348 AACGCCCAAAAAAAA TGGGCGG TGAAAAC CCGCCCA TTTGGTCGTGTGAAG TERM 2610 2140355 - 2140335 - R 100 -9.7 -5.77853 | opp_overlap 2140335, overlap 2140322 2140348 AACGCCCAAAAAAAA TGGGCGG TGAAAAC CCGCCCA TTTGGTCGTGTGAAG Pnap_2014 2142069 - 2140465 - | ABC transporter related TERM 2611 2141465 - 2141448 - G 81 -7.7 -4.41494 | gap 1, overlap 2141451 CATGCGTAATTAAAA GCA-CGGC CAT GCCGTTGC GCCGCTGCAAATCAC Pnap_2015 2143121 - 2142066 - | binding-protein-dependent transport systems inner membrane component Pnap_2016 2144158 - 2143124 - | binding-protein-dependent transport systems inner membrane component TERM 2612 2143793 - 2143811 + g 76 -6.7 -4.41047 | gap 1 CGTCCAGAGCCCCAG GCTGACCG ACAC CGG-CAGC TTTTCCTTGACCAGT Pnap_2017 2145985 - 2144171 - | extracellular solute-binding protein TERM 2613 2145310 - 2145324 + g 73 -6.4 -4.36914 | TAATGTCGCGCCCCA TTGCCG GGC TGGCAA TTTTGTACGGCCCCG TERM 2614 2145472 - 2145462 - G 74 -4.6 -4.58773 | overlap 2145463 GTCAGGAAATCAAAA CGCA CCA CGCG CTCGGAAACCACAGT Pnap_2018 2146098 - 2146895 + | short-chain dehydrogenase/reductase SDR TERM 2615 2147713 - 2147743 + G 75 -12.4 -3.57144 | opp_overlap 2147695 2147694 2147713 GGCGGCTGACGGAAA GCCGGCGCAGCGCT TCA AGCTCGGCACCGGC TTTAGCGATGCCCAG TERM 2616 2147743 - 2147713 - g 85 -14.6 -3.64703 | opp_overlap 2147713, overlap 2147695 2147694 GGCGGCTGACGGAAA GCCGGCGCAGCGCT TCA AGCTCGGCACCGGC TTTAGCGATGCCCAG Pnap_2019 2146979 - 2147866 + | DNA ligase TERM 2617 2147892 - 2147917 + T 74 -10.5 -3.59979 | gap 1, opp_overlap 2147892 GCGCTTTGTAAAAAA GGCCATCGCACG GTG TGTG-GATGGCC TTTGGACTCAAGCCG TERM 2618 2147917 - 2147892 - T 100 -9.8 -5.00616 | gap 1, opp_overlap 2147892 GCGCTTTGTAAAAAA GGCCATCGCAC GGTGT GTG-GATGGCC TTTGGACTCAAGCCG TERM 2619 2147955 - 2147967 + T 76 -10.5 -3.68979 | opp_overlap 2147953, overlap 2147930 GTCCCGACAACATTT CCGGG TTT CCCGG TTGGTTATTTCTTCA Pnap_2020 2150305 - 2147972 - | lysine decarboxylase TERM 2620 2149599 - 2149565 - G 75 -4.4 -4.72272 | gap 2, overlap 2149585 GTTGGTCACGAAAAA GCAATG-GTCG-GCAT TGAAG ATGCGCGCCGCATTGC GCTCGCTGGCGCCGA TERM 2621 2149606 - 2149622 + g 71 -11.5 -3.40522 | overlap 2149607 CCGCATTGCGCTCGC TGGCGCC GAT GGCGCCG TTGTGGTCGAGCAGT TERM 2622 2149711 - 2149722 + g 70 -7.2 -4.07568 | ACTGGTGGTACATCT GCCC GACC GGGC TTTTCAGGAAAGCAA TERM 2623 2150408 - 2150383 - H 100 -15.5 -3.57144 | opp_overlap 2150383 2150386, overlap 2150386 2150400 TGCGCCAGCTGGAAA GAATCGCGCCG CGAA CAGCGCGATTC TTTTGCGCCCGGCGA TERM 2624 2150383 - 2150408 + H 100 -13.3 -4.07568 | opp_overlap 2150383 2150386 2150400, overlap 2150386 TGCGCCAGCTGGAAA GAATCGCGCCG CGAA CAGCGCGATTC TTTTGCGCCCGGCGA TERM 2625 2150405 - 2150386 - H 85 -11.4 -3.92542 | opp_overlap 2150386 2150383, overlap 2150383 2150400 GCCAGCTGGAAAGAA TCGCGCCG CGAA CAGCGCGA TTCTTTTGCGCCCGG TERM 2626 2150386 - 2150405 + H 80 -9.2 -4.17048 | opp_overlap 2150383 2150386 2150400, overlap 2150383 GCCAGCTGGAAAGAA TCGCGCCG CGAA CAGCGCGA TTCTTTTGCGCCCGG TERM 2627 2150656 - 2150707 + G 75 -11.7 -3.59979 | gap 3, overlap 2150693 GGGCACGTTTTACCT GCTCATGCTGGCC-ACGG-G-ACTGG TTG CCGGTGCGCTGGCGGCCAGCATGGGC TTTGCCCTGGCCGGC Pnap_2021 2150579 - 2151007 + | hypothetical protein TERM 2628 2151035 - 2151052 + F 72 -2.5 -4.86731 | GATGGGTTGATCCTG GGCCGCC CACC GAAGGCC TTTTATTTGAAGCAA TERM 2629 2151874 - 2151864 - g 86 -8.2 -4.57341 | opp_overlap 2151863 AAGGTCGCCGAAAAA GCCG TCG CGGC CTATTCGCAGGTCGC Pnap_2022 2151078 - 2151989 + | band 7 protein TERM 2630 2152393 - 2152373 - g 74 -5.4 -4.59773 | opp_overlap 2152375 GCGCAGCTTGAAAAA CACCGC TATCAGGGC GCGGTG CATTAACAAAGAATT Pnap_2023 2152025 - 2152399 + | hypothetical protein TERM 2631 2152602 - 2152628 + G 100 -14.5 -5.80951 | opp_overlap 2152602 AGAAACAGAGAAAAA GCCCCGTAACT CAATA GGTTACGGGGC TTTTTTGTTTTCAAT TERM 2632 2152628 - 2152602 - g 100 -13.8 -5.1634 | opp_overlap 2152602 AGAAACAGAGAAAAA GCCCCGTAAC TCAATAG GTTACGGGGC TTTTTTGTTTTCAAT Pnap_2024 2152558 - 2152818 + | hypothetical protein Pnap_2025 2153819 - 2152815 - | aldo/keto reductase TERM 2633 2153035 - 2153051 + g 73 -10.8 -3.61517 | overlap 2153041 2153042 GCCAGCGCCAGCTGG GCCGGC GTGCA GCCGGC TTCTTGCGCAAGGCT TERM 2634 2153236 - 2153218 - G 71 -5.2 -4.42788 | overlap 2153222 CTGAAGGCGACAAAA GCCACG CCGAGTT CGCGGC AGGCTTGCAGCACGG TERM 2635 2153910 - 2153859 - R 100 -23.2 -4.13767 | gap 1, opp_overlap 2153860 2153862, overlap 2153862 2153864 TTGTTGACGTTAAAA GCAGAGGGCCGGACCACACAAACGC AGC GCGTCTG-GTGATCCGGCCCTCTAT TCTGGGTTGATCCTG TERM 2636 2153860 - 2153909 + r 100 -20.1 -3.43944 | gap 1, opp_overlap 2153859 2153862 2153864, overlap 2153862 TGTTGACGTTAAAAG CAGAGGGCCGGACCACACAAACGC AGC GCGTCTG-GTGATCCGGCCCTCTA TTCTGGGTTGATCCT TERM 2637 2153907 - 2153862 - R 100 -27.1 -3.09831 | gap 1, opp_overlap 2153860 2153862, overlap 2153859 2153864 TTGACGTTAAAAGCA GAGGGCCGGACCACACAAACGC AGC GCGTCTG-GTGATCCGGCCCTC TATTCTGGGTTGATC TERM 2638 2153862 - 2153907 + r 100 -22.7 -3.28814 | gap 1, opp_overlap 2153862 2153859 2153864, overlap 2153860 TTGACGTTAAAAGCA GAGGGCCGGACCACACAAACGC AGC GCGTCTG-GTGATCCGGCCCTC TATTCTGGGTTGATC TERM 2639 2153905 - 2153864 - R 100 -23.9 -3.10537 | gap 1, opp_overlap 2153862 2153860, overlap 2153862 2153859 GACGTTAAAAGCAGA GGGCCGGACCACACAAACGC AGC GCGTCTG-GTGATCCGGCCC TCTATTCTGGGTTGA Pnap_2026 2154914 - 2153952 - | oxidoreductase domain-containing protein TERM 2640 2154879 - 2154896 + g 71 -8.3 -3.93659 | GATGCCGAAGGCCCC GGCGCCC GCCA GGGCGAC TTTGATGGTTTTGCT Pnap_2027 2155832 - 2154915 - | protocatechuate 4,5-dioxygenase subunit beta Pnap_2028 2156285 - 2155833 - | protocatechuate 4,5-dioxygenase subunit alpha Pnap_2029 2157227 - 2156289 - | amidohydrolase 2 Pnap_2030 2158235 - 2157237 - | hypothetical protein Pnap_2031 2158958 - 2158269 - | hypothetical protein Pnap_2032 2159990 - 2158962 - | amidohydrolase 2 TERM 2641 2159247 - 2159259 + g 72 -2.6 -4.7629 | opp_overlap 2159242 GTTCAGCAGATGCTC GCTC AGCAA GGGC TTTTTGAGTTCCTGC Pnap_2033 2161169 - 2160000 - | hypothetical protein TERM 2642 2161128 - 2161110 - G 95 -10.2 -4.56597 | GGCCTGGTTGAAAAA CGGCCCCT TCG AGGTGCCG CCGCGCATGAACAGG TERM 2643 2162197 - 2162164 - g 73 -6.7 -4.2828 | CCTGACGCAGCAAAA CACCCTGGCATTG ATCCAGCG CATCGCCAGGATG CAGCTCTCAGCGTCC Pnap_2034 2161304 - 2162215 + | LysR family transcriptional regulator Pnap_2035 2162616 - 2163020 + | hypothetical protein TERM 2644 2163408 - 2163390 - g 70 -10.2 -3.67141 | opp_overlap 2163391 2163396 ACAACCTGACGCAAA GCGGTGTC GCC GACGCCGC CGATTTCCAGCAAGT Pnap_2036 2163047 - 2163877 + | ModE family transcriptional regulator TERM 2645 2164060 - 2164050 - g 76 -8.2 -4.11216 | overlap 2164033 2164031 CGCCGACTTTGAAAA GGCC ACC GGCC ACAAGGTCGTCGCCG Pnap_2037 2163910 - 2164662 + | molybdenum ABC transporter, periplasmic molybdate-binding protein Pnap_2038 2164677 - 2165108 + | hypothetical protein TERM 2646 2165598 - 2165618 + G 74 -6.1 -4.40561 | overlap 2165595 2165599 2165600 CTCTCGGAAACGCTG CTGGTGTTC GCC GAACACCGA TTGTTTTTAACCGAC TERM 2647 2165716 - 2165686 - g 100 -3.8 -5.61596 | overlap 2165687 2165689 AGCCCGAGAAAAAAA TCATCGTCGAAGTC GGC GACCCCGGCGAGGC GCTGCGCTGGGCGCT Pnap_2039 2165127 - 2165966 + | modD protein Pnap_2040 2166052 - 2166732 + | molybdate ABC transporter, inner membrane subunit Pnap_2041 2166734 - 2167804 + | molybdate ABC transporter, ATPase subunit Pnap_2042 2168503 - 2167904 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding TERM 2648 2168098 - 2168066 - G 74 -13.4 -2.8806 | gap 1 AAATCTCTGCACATA GGCAGCCCGGCA-GG CATC CCACGCCGGGGTGCC GACTTCCAGTTCCCG TERM 2649 2168957 - 2168921 - R 72 -3.5 -4.75404 | opp_overlap 2168923, overlap 2168922 2168923 2168954 AAATTTCAGCAAAAA CTGCCTCCAGCGCATGC TGG ACATGCGCAAGCAGCTA CTTAATTAATAGCAA TERM 2650 2169002 - 2168976 - R 91 -7.9 -4.90136 | gap 1, overlap 2168977 2168979 AATTAATAGCAAAAA TCAGCCCGCCGC AGCC ACGGCGGGC-GT CGCCTGCAACAGTTC TERM 2651 2169001 - 2168977 - R 77 -11.4 -3.52455 | gap 1, overlap 2168976 2168979 ATTAATAGCAAAAAT CAGCCCGCCGC AGCC ACGGCGGGC-G TCGCCTGCAACAGTT TERM 2652 2169000 - 2168979 - R 95 -15.1 -3.32265 | overlap 2168977 2168976 TAATAGCAAAAATCA GCCCGCCGC AGCC ACGGCGGGC GTCGCCTGCAACAGT Pnap_2043 2170808 - 2168976 - | hypothetical protein TERM 2653 2169150 - 2169202 + g 88 -17.6 -3.02511 | gap 1, overlap 2169161 GCCGCTCAGCGCCAG CAGGGCCAG-CGCGGCGGTGCCGTT GCCT GACGGCGTCGCCGCGTCCAGCCCGG TCTTGAGCCGGTGGA TERM 2654 2169480 - 2169465 - G 76 -10.4 -3.85698 | overlap 2169466 CCCGGCCTGCACAAA GCGCAG CGCG CTGCGC GCCGCCAGCAGCCAC TERM 2655 2170094 - 2170059 - G 78 -6.7 -4.62069 | GCTGTAGCGGAAAAA GCCGCCGCCGATCTG GTCGTA CAGACCGCCTTCGGC CATCTTGCGCAGCGT TERM 2656 2170224 - 2170170 - G 73 -3.3 -4.72272 | gap 2, overlap 2170172 2170194 2170212 2170213 GCGGCGCAGCAAAAA GGC-CAGGTC-GCTGGGGTGCGGAAAC TTC GGCGCCGCGCCAAAGCCGCCCTGCGCC GGATCAAAGGCGGTG TERM 2657 2170212 - 2170194 - G 71 -11 -3.53012 | overlap 2170170 GCTGGGGTGCGGAAA CTTCGGCG CCG CGCCAAAG CCGCCCTGCGCCGGA TERM 2658 2170527 - 2170484 - G 85 -5.9 -4.96848 | gap 2, overlap 2170485 GCGGCGAGAGAAAAA TCGTCAGCGGCCAGCCGCCGC CGGT GCGGCG-C-AGCAGCTGATGG GCCATCTGATAGACG Pnap_2044 2171296 - 2171048 - | hypothetical protein TERM 2659 2171393 - 2171368 - R 86 -9.7 -4.25052 | gap 1, opp_overlap 2171382, overlap 2171362 2171365 ATAGCAAAACAAGAA GCCTGAAGGCCG GTT CGGCC-TCAGTC CAGGTCGATTTCCAC Pnap_2045 2171699 - 2171388 - | Rieske (2Fe-2S) domain-containing protein Pnap_2046 2173296 - 2171719 - | hypothetical protein TERM 2660 2172774 - 2172761 - G 72 -4.5 -4.60797 | CCGGGATAGATAAAA CCGGT ATCG ACCAG CAGCAGGCCCGCGCT TERM 2661 2173483 - 2173459 - R 100 -13 -5.72254 | opp_overlap 2173459 CCAAACAACAAAAAA GCCTGCTATT GATTA AATAGCAGGC TTTTCATATCCCGTA TERM 2662 2173459 - 2173483 + r 100 -13 -4.35116 | opp_overlap 2173459 CCAAACAACAAAAAA GCCTGCTATT GATTA AATAGCAGGC TTTTCATATCCCGTA Pnap_2047 2174582 - 2173749 - | UBA/THIF-type NAD/FAD binding protein TERM 2663 2174138 - 2174149 + g 76 -7.2 -4.28656 | overlap 2174136 TTTTGATGGCCCATG CCGC CATG GCGG TTTTGGCTCTTACCT Pnap_2048 2175427 - 2174666 - | TPR repeat-containing protein TERM 2664 2175390 - 2175363 - G 76 -7 -4.41348 | gap 1, overlap 2175380 TCGTCTTCAAACAAA GCGGCGTTGGCAT TGA ATGCCAGCAC-GC AGGCGGCAACAGCAA Pnap_2049 2175982 - 2175443 - | OmpA domain-containing protein TERM 2665 2175498 - 2175511 + g 80 -5.2 -4.8622 | GACGCTTCATCGAGT CCCG GAACGG CGGG TTTTTCCTTGCCGAA Pnap_2050 2177316 - 2176027 - | TolB domain-containing protein Pnap_2051 2178173 - 2177331 - | glycosyl transferase family protein Pnap_2052 2178940 - 2178173 - | glycosyl transferase family protein TERM 2666 2179411 - 2179444 + G 79 -8.7 -4.36914 | opp_overlap 2179433 TGGTGCTCATCATCC GCGACCGGCGCGAAG CAAA TTATGCGCTGGGCGC TTTTGTCGCCGCACA TERM 2667 2179803 - 2179817 + G 72 -2.7 -4.74103 | CTCTTGCCCTTCTTG CTGGC GCTGG GCCTG TTTTTCAGTTCAAGC Pnap_2053 2179137 - 2180354 + | O-antigen polymerase TERM 2668 2180851 - 2180863 + G 71 -5.5 -4.36903 | opp_overlap 2180846, overlap 2180846 GAACTGGAAACTGAC GCTGA TCG TCGGC TTTCTGTTTCCTGCG TERM 2669 2180958 - 2180934 - g 76 -9.9 -3.95584 | overlap 2180910 GCCTGACCAAGGAAA GCCAGACGGCC ACG GACAGCCTGGC CTACGTGGTTGAAGA TERM 2670 2181266 - 2181246 - g 73 -6.7 -4.25104 | TCGCGCCCATCAAAA GCCTGTCGG ATG CCGCCACGC CGGTCACGCGCGGAC Pnap_2054 2180351 - 2182132 + | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Pnap_2055 2182733 - 2182134 - | hypothetical protein Pnap_2056 2183274 - 2184041 + | polar amino acid ABC transporter, inner membrane subunit TERM 2671 2184266 - 2184236 - g 71 -6 -4.30014 | TGCATGAACCGAAAA CCGATGTCGATGCG CTG CGCTCGGAAATCGG CATGGTGTTCCAGCG Pnap_2057 2184019 - 2184750 + | ABC transporter related Pnap_2058 2185079 - 2184867 - | hypothetical protein TERM 2672 2184996 - 2185020 + g 74 -9.9 -3.81755 | GTTCAGGTAGTTGCC GGGCAGGTCGG CAA TCAGCCTGCCC TTGTATTTGCCGAAT Pnap_2059 2185444 - 2185082 - | translation initiation factor SUI1 Pnap_2060 2185918 - 2185487 - | hypothetical protein TERM 2673 2185759 - 2185773 + g 73 -11.4 -3.61764 | overlap 2185770 AGCGGCTCACCCTGA CGCGCA TGA TGCGCG TTTCGCCGTTGATGG TERM 2674 2186032 - 2186052 + r 73 -10.3 -3.45321 | opp_overlap 2186010 2186009 CGCCCTGCCCCTTCC CGGCCCGGG CAC CTCCGGCCG TTGTGAATTATCAAT Pnap_2061 2188547 - 2186115 - | glycosyl transferase family protein TERM 2675 2187733 - 2187760 + g 83 -4.9 -5.0538 | gap 1, overlap 2187725 2187734 CCCAGCGTTTCGGTC TGCCGCTCGAAA TCAAT TTTC-AGCGGCC TTTTTTGCAATGCGG Pnap_2062 2189198 - 2188620 - | hypothetical protein TERM 2676 2189921 - 2189893 - g 78 -14.5 -3.01712 | opp_overlap 2189918 TGCGCTGGGCCAACA GCTGGCGCGGC TGGCAGC GCCGCGCCGGC CAGTTGCGCGCCACG TERM 2677 2191016 - 2191000 - g 93 -3.6 -5.66684 | overlap 2191002 CAAGCCATAAAAAAA CCGCCT TTGCC AGGCTG AGCGAAGCTTGGCTG TERM 2678 2191381 - 2191344 - g 83 -9.2 -4.30014 | gap 3 CCGATCAACGCAAAA GAGGCCG-GCC--TGGCGG GCG CAGCCACGGGCGCGGCCTC GGGCGCGTCCATCGA Pnap_2063 2189265 - 2191829 + | hypothetical protein Pnap_2064 2193182 - 2191953 - | major facilitator superfamily transporter TERM 2679 2192122 - 2192109 - G 93 -2.3 -5.61881 | overlap 2192118 2192120 GCCCAAAAACAAAAA CGATG AAAA CAGCG ACACCGCCGTGCCGC TERM 2680 2192131 - 2192118 - G 74 -5.9 -4.45077 | opp_overlap 2192127, overlap 2192109 2192120 CAAAAACGATGAAAA CAGCG ACAC CGCCG TGCCGCGCGCATGCG TERM 2681 2192137 - 2192120 - G 71 -9.1 -3.80437 | opp_overlap 2192127, overlap 2192109 2192118 AAAACGATGAAAACA GCGACAC CGCC GTGCCGC GCGCATGCGGGGCCA TERM 2682 2192207 - 2192196 - G 88 -7.2 -4.93696 | overlap 2192197 2192198 GTGAAACATGAAAAA GCCG AACC CGGC CAGCAGGCTCGCCGG TERM 2683 2193099 - 2193051 - G 95 -19.6 -3.31248 | overlap 2193041 GAACACGCGCGACAA CTCGGGCAGCATGGCGTCGCAG ATGCG CTGCGCCGCCATGCTGGCGAAG GTGCCCAGCGACAGC Pnap_2065 2195289 - 2193229 - | glycosyl transferase family protein TERM 2684 2194275 - 2194291 + g 93 -13.7 -4.11216 | CCTGCCCGGCCTTGC GCTGGCC GTC GGCCAGC TTTTGCAGCTGCGCC Pnap_2066 2195568 - 2195780 + | hypothetical protein Pnap_2067 2196763 - 2195789 - | ribokinase-like domain-containing protein Pnap_2068 2198307 - 2196772 - | Altronate dehydratase Pnap_2069 2199496 - 2198348 - | mannitol dehydrogenase domain-containing protein TERM 2685 2198424 - 2198444 + g 74 -2.3 -4.84359 | overlap 2198425 2198437 TGCGCAAGGGCGACG ACGGGGCCG AGG CGGCGCAGC TTTTTCTGCGCATGG TERM 2686 2199312 - 2199363 + g 87 -17.3 -2.90496 | overlap 2199318 ATGCGCACCGGGTAA CCGGCGCCGCTGGCCAGCGCGG-CC ACGC GGACCGTGCTGGCCGG-GCTGCTGG TGGTTTGCACGACGG TERM 2687 2199318 - 2199366 + g 83 -14.6 -3.53444 | overlap 2199312 ACCGGGTAACCGGCG CCGCTGGCCAGCGCGGCCA-CGCG GAC CGTGCTGGCCGGGCTG-CTGGTGG TTTGCACGACGGTGA Pnap_2070 2200512 - 2199502 - | alcohol dehydrogenase TERM 2688 2199878 - 2199838 - G 74 -5.2 -4.60487 | gap 2, opp_overlap 2199828, overlap 2199828 2199839 2199840 CACCACGTCGAAAAA CTCGCCGTTCGTGGCGGCGC CAA GCGCGGCCTCGT-CGTCG-G CGCCCAGCGCCACCG TERM 2689 2200378 - 2200366 - G 76 -6.2 -4.62069 | CGGGTACTGCAAAAA CGGC TGGTT GCCG GTGTAGATATGCAGG Pnap_2071 2201349 - 2200582 - | extracellular solute-binding protein Pnap_2072 2202135 - 2201407 - | ABC transporter related TERM 2690 2201786 - 2201804 + g 85 -5.8 -5.00616 | overlap 2201788 2201789 TTCGCGGCATTCTGG CGCGCCGC ATC GCGGCTGG TTTTTTGCACCAGGC Pnap_2073 2202769 - 2202119 - | polar amino acid ABC transporter, inner membrane subunit Pnap_2074 2203465 - 2202782 - | polar amino acid ABC transporter, inner membrane subunit Pnap_2075 2203710 - 2204477 + | GntR domain-containing protein TERM 2691 2204596 - 2204572 - T 71 -10.7 -3.25823 | opp_overlap 2204568 2204568 CGGTTTTCATAGCAA TCTGCGCATGC AGG GCGTGCGCAAA AGCCTTATTTTGCTT Pnap_2076 2205844 - 2204657 - | GntR family transcriptional regulator TERM 2692 2204780 - 2204801 + g 74 -5.1 -4.59853 | gap 1, opp_overlap 2204780 2204762 CGCACCGGGCACGAA GGCGA-CGAG CTG CTCGATGGCC TTTTTGGCGAATTCG TERM 2693 2206755 - 2206765 + G 73 -8.2 -4.08216 | overlap 2206748 GGCAAGCTGCGTTAC CGCG CAC CGCG TTTTAGCAACCGTCC TERM 2694 2207147 - 2207133 - g 88 -4.2 -5.37345 | overlap 2207135 TGCAACCAGAAAAAA GGTGTC CAG GACATC AAGGACTTCTTGCTC TERM 2695 2207415 - 2207399 - g 73 -6.5 -4.34263 | opp_overlap 2207399 CGTCAACAACACAAA CGCGC CCATGCT GCGCG TTATCTGCACCGGAC TERM 2696 2207768 - 2207787 + G 70 -10.6 -3.5394 | CACCGCGCTATCCAT CCCCGGCC TGAA GGCCGAGG TTTCCCGCGCAATTT Pnap_2077 2206425 - 2207804 + | HNH endonuclease TERM 2697 2209344 - 2209365 + G 76 -5.7 -4.56775 | GCTTTGCCACAGCGC TCCCCACGG CCTA CCGCGAGGA TTTTTCGGCGGCGGT TERM 2698 2211134 - 2211106 - g 72 -12.3 -3.33492 | overlap 2211107 CCAGGTAGGCGACAA GGCCGGCGACGCG TTT CGCGTCAACGGCG GCGAGCTGCGCTGCA TERM 2699 2211133 - 2211107 - g 77 -15.8 -2.59881 | overlap 2211106 CAGGTAGGCGACAAG GCCGGCGACGCG TTT CGCGTCAACGGC GGCGAGCTGCGCTGC TERM 2700 2211595 - 2211561 - g 76 -6.3 -4.4017 | gap 1, overlap 2211563 GCAAGGCCCAGAAAA CCGGACTCACGGCGCC CGAA GGCGCGGTG-GTGCTG GCCTACGCCAAGATG Pnap_2078 2207801 - 2212558 + | NAD-glutamate dehydrogenase Pnap_2079 2212579 - 2213223 + | endonuclease III TERM 2701 2213656 - 2213644 - g 71 -9.1 -3.72576 | TTTCGGCCCACGAAA CGTCC AGC GGACG CGACTTTCGCTTTGT Pnap_2080 2213352 - 2214290 + | ribokinase-like domain-containing protein TERM 2702 2214301 - 2214311 + F 77 -8.2 -4.08767 | CTTGATCTAGCGCAA GCCG GCA CGGC TTTTCAGCCGCTACC Pnap_2081 2214516 - 2216981 + | phosphoenolpyruvate synthase Pnap_2082 2216978 - 2217355 + | signal-transduction protein Pnap_2083 2217839 - 2217363 - | putative transposase of insertion sequence ISRm10-1 TERM 2703 2217816 - 2217792 - G 71 -11.4 -3.53012 | gap 1, opp_overlap 2217803 GCCGGCGGGCGCAAA GCCCCGGCAGC GCTG GCC-CCGGGGC GAGCGGCCCCGCGTC Pnap_2084 2218317 - 2217901 - | hypothetical protein Pnap_2085 2220379 - 2218691 - | peptidase C14, caspase catalytic subunit p20 TERM 2704 2219078 - 2219037 - G 70 -10.1 -3.62597 | gap 1 TCGACGGCGTAATAA CGGC-CAGCCCCCGGGTT GACCTGG AACCGGGGCGCCGCGCCG TTGGCCGGGAAAGCG TERM 2705 2219093 - 2219138 + g 77 -15.4 -2.64155 | gap 1, opp_overlap 2219092 2219091, overlap 2219091 2219090 GTTGGCCGGGAAAGC GGTCGGC-GCGGTGATGGCGG GCACG CCGGCATCGCCGCCGCCGGGC TGGGTTTGCGCGACC Pnap_2086 2223599 - 2220408 - | hypothetical protein TERM 2706 2221488 - 2221443 - G 73 -8.1 -4.02022 | gap 1 CGGAACCAGCAGAAA CCGGCCGGGCTGCCG-GAGATT GCG AAACACGCGGTAGGACGGCCGG TTCAGCGCGACCACT TERM 2707 2223629 - 2223667 + r 74 -10.3 -3.61103 | gap 2, opp_overlap 2223620 2223622 2223630, overlap 2223630 GGTAAATATCCAGCA AGG-GCCGGGCAG-GCG TCTCAAT CGCCCTGCCCGGCGCCG TTTGGGGTCAGCTTA TERM 2708 2223630 - 2223666 + r 79 -13.8 -2.7634 | gap 2, opp_overlap 2223620 2223622 2223630, overlap 2223629 GTAAATATCCAGCAA GG-GCCGGGCAG-GCG TCTCAAT CGCCCTGCCCGGCGCC GTTTGGGGTCAGCTT TERM 2709 2223665 - 2223630 - R 95 -14 -3.23638 | gap 1, opp_overlap 2223630 2223629, overlap 2223620 2223622 GTAAATATCCAGCAA GGGCCGGGCAG-GCG TCTCAAT CGCCCTGCCCGGCGC CGTTTGGGGTCAGCT Pnap_2087 2226246 - 2223688 - | hypothetical protein TERM 2710 2223963 - 2224010 + g 71 -11.1 -3.53012 | overlap 2223964 GAGGCTGGACCACGG GGGTTGCCCCTGGGGGCGGTG GCGGCA CGCCGCCGCCGGTGGTGACCG TTTCCGGGACCGGAA TERM 2711 2223964 - 2224009 + g 75 -14.6 -2.71712 | overlap 2223963 AGGCTGGACCACGGG GGTTGCCCCTGGGGGCGGTG GCGGCA CGCCGCCGCCGGTGGTGACC GTTTCCGGGACCGGA TERM 2712 2226127 - 2226106 - G 72 -2.2 -4.72029 | gap 1, opp_overlap 2226117 2226125, overlap 2226108 CGGAATGTAATAAAA GACGGGAGC CTTGC GCTCGCG-C TGCAGCGCATCGTTG TERM 2713 2226242 - 2226225 - G 74 -4.7 -4.60041 | opp_overlap 2226241, overlap 2226215 AGCCACCGGCAAAAA CCGGCCC TACA GGATCGG ACATATTGTGTTCTC TERM 2714 2226515 - 2226527 + H 71 -4.7 -4.56597 | opp_overlap 2226503 GAATGCGGCTGTCCG CCGAG CAA CACGG TTTTTCAGGCAGCGC Pnap_2088 2226779 - 2227240 + | UspA domain-containing protein TERM 2715 2227499 - 2227450 - g 75 -12 -3.57144 | gap 1 TCGCCGAGTTTGAAA GCTTCGGCAGCGAGGCGCTGCCC TTCCC GTTCAGCGCCTGGCCGCCGG-GC AACAGCCAAATCAGC Pnap_2089 2227230 - 2227520 + | putative lipase Pnap_2090 2228383 - 2227577 - | hypothetical protein TERM 2716 2228429 - 2228411 - H 91 -12.4 -4.1673 | GAACTCTTGAATAAA GGCGCGAT GCT ACCGCGCC CGGCTTACATTTGGC TERM 2717 2228494 - 2228511 + H 71 -4.7 -4.56597 | overlap 2228467 2228496 CTGTGCGATGCGGGC CGGCGGC GTAT GCTGCAG TTTTTAAAAAAAGGG TERM 2718 2229073 - 2229055 - g 70 -8 -4.08767 | opp_overlap 2229066, overlap 2229056 CGCAGTGGCTCAAAA CCCGCGGC GAT GCCACCGG CAAGCTCGGCGCGGT Pnap_2091 2228535 - 2229446 + | carboxymethylenebutenolidase TERM 2719 2230560 - 2230574 + G 78 -7 -4.56597 | overlap 2230547 AGCGTCTATCTCCGG GCCGGC ATT GACGGC TTTTTCACCGACGAC Pnap_2092 2229525 - 2230631 + | glycerophosphoryl diester phosphodiesterase Pnap_2093 2231037 - 2232458 + | GntR family transcriptional regulator Pnap_2094 2233757 - 2232468 - | cytochrome c, class I TERM 2720 2232780 - 2232790 + g 72 -2.4 -4.71426 | overlap 2232764 GCAATGCTGCTCGTA CAGC TTG GCGG TTTTGTTGGTGCCCA TERM 2721 2232966 - 2232978 + g 95 -10.5 -4.56597 | overlap 2232956 GCTCGCCGAGGTGCC CGGCG CCA CGCCG TTTTTGAGCAGGCCC Pnap_2095 2234608 - 2233754 - | putative cytochrome c Pnap_2096 2236053 - 2234605 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pnap_2097 2237056 - 2236088 - | hypothetical protein Pnap_2098 2238345 - 2237053 - | FAD dependent oxidoreductase TERM 2722 2237466 - 2237482 + g 72 -4.3 -4.65747 | overlap 2237468 TGCGGTTGTAGACGC CGTCGGC ATG GTCGAGG TTTTCTTGCAGGTTA Pnap_2099 2238689 - 2238402 - | hypothetical protein TERM 2723 2238771 - 2238738 - R 95 -14 -3.53012 | gap 2 GGTTTGGGTTCTAAA GCGC-TGCGGCG-TGA CGGC TCAGCGCCGCATGCGC CCTGTACAGGTCCGC Pnap_2100 2239935 - 2238733 - | glycosyl transferase, group 1 TERM 2724 2238836 - 2238818 - G 72 -7.3 -4.18018 | GCCGGCCAGCCAAAA CGCCGGC AAACG GCCGGGG TCTGCGCCAGTGCTT TERM 2725 2239324 - 2239311 - G 83 -5.2 -4.99035 | overlap 2239312 CGATCGAGAGAAAAA CCGG CGCATC CCGG CCGCCGCGCAAACCC Pnap_2101 2240953 - 2239928 - | AIR synthase related protein TERM 2726 2240902 - 2240879 - G 74 -12.4 -3.53012 | gap 1 GCGTTTGTGCGCAAA GCCGCGCCCGG CCA CCAGG-GCGGC CGTCAATGCCGGGAG Pnap_2102 2241507 - 2240950 - | GCN5-related N-acetyltransferase TERM 2727 2241070 - 2241087 + g 76 -12.7 -3.53091 | opp_overlap 2241055 GCTCTCTTGCTTGAG CGCCTGC CAGT GCAGGCG TTTGAACAGAGGGGT Pnap_2103 2242608 - 2241520 - | radical SAM domain-containing protein Pnap_2104 2243632 - 2242571 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Pnap_2105 2244129 - 2243647 - | hypothetical protein TERM 2728 2244996 - 2245014 + G 76 -6.7 -4.4009 | GTGCCCCGGCATCCA CAGTGTG CTGAC CGCACTG TTTTCTCAACTGGCC Pnap_2106 2244484 - 2245872 + | GntR family transcriptional regulator Pnap_2107 2247215 - 2246034 - | benzoate transporter TERM 2729 2246463 - 2246445 - G 76 -5.8 -4.57073 | overlap 2246446 2246447 GATGCCGCCGAAAAA TGCCACGC CCA GCGAGGCC AGGCTGGTCGTGATG TERM 2730 2246847 - 2246825 - G 78 -4.9 -4.6971 | gap 2, opp_overlap 2246836 CAAACTGGAACAAAA TGCC--CGCCA TCA TGGCGCTGGCA ATGCCTTTGGGGATG TERM 2731 2247404 - 2247375 - R 71 -9.9 -3.51411 | opp_overlap 2247376, overlap 2247371 2247376 ACGGGTTGAAACGAA TGCGCTCTGGCTC ACAA GAACCGGAGCGCT TGCTTCCTACTTGCC TERM 2732 2247403 - 2247376 - R 79 -13.4 -2.70525 | opp_overlap 2247376, overlap 2247375 2247371 CGGGTTGAAACGAAT GCGCTCTGGCTC ACAA GAACCGGAGCGC TTGCTTCCTACTTGC TERM 2733 2247376 - 2247403 + r 88 -13.4 -3.43151 | opp_overlap 2247375 2247371 2247376 CGGGTTGAAACGAAT GCGCTCTGGCTC ACAA GAACCGGAGCGC TTGCTTCCTACTTGC Pnap_2108 2248775 - 2247411 - | major facilitator superfamily transporter benD 2249629 - 2248850 - | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase TERM 2734 2249665 - 2249646 - R 74 -4.2 -4.68994 | gap 1, overlap 2249648 ATGAGGACTTAAAAA GAGCCCGCA ACG CACGGGC-C GAATGGAAGGATGAA TERM 2735 2249664 - 2249648 - R 71 -7.9 -3.95883 | overlap 2249646 GAGGACTTAAAAAGA GCCCGCA ACG CACGGGC CGAATGGAAGGATGA Pnap_2110 2250707 - 2249700 - | oxidoreductase FAD/NAD(P)-binding subunit TERM 2736 2250132 - 2250111 - G 72 -7.9 -4.18018 | GTCGCGCAGGTAAAA GCTGCCCAG CGGG CCGGCCAGC GTCATGCGCTCGCCG Pnap_2111 2251215 - 2250727 - | 2-chlorobenzoate 1,2-dioxygenase Pnap_2112 2252617 - 2251226 - | Rieske (2Fe-2S) domain-containing protein TERM 2737 2252660 - 2252622 - H 72 -11.1 -3.05384 | opp_overlap 2252608 CTCGTTTGCATGGAA CCCCTGCAACGATGCAT TGACG ATGCATCGCCACAGGAA AAAATTATGCGTTTT Pnap_2113 2252638 - 2252982 + | hypothetical protein TERM 2738 2253927 - 2253907 - g 72 -4.5 -4.57073 | opp_overlap 2253920, overlap 2253909 CAGGCGGCCGAAAAA CTGCTGGCC GAT AGCCCGCCG CCGCCTGCCGGCGCC Pnap_2114 2253010 - 2253951 + | LysR family transcriptional regulator Pnap_2115 2254410 - 2253952 - | hemerythrin-like metal-binding protein TERM 2739 2254472 - 2254451 - R 100 -7.9 -5.24531 | opp_overlap 2254451 AGTTTCGACAAAAAA GCCGCTCTC TTTC GAAGGCGGC TTTTTATTCATTCAG TERM 2740 2254451 - 2254472 + r 100 -7.9 -5.1963 | opp_overlap 2254451 AGTTTCGACAAAAAA GCCGCTCTC TTTC GAAGGCGGC TTTTTATTCATTCAG Pnap_2116 2255433 - 2254519 - | intradiol ring-cleavage dioxygenase TERM 2741 2255243 - 2255213 - G 70 -7.5 -4.08945 | overlap 2255214 AGCAGGCGGTCAAAA CCCAGGCCGGC GGTGATCAG GCCGACCTGGC CGCCCTGGGCCAGGC TERM 2742 2255489 - 2255476 - R 100 -9.5 -5.60993 | GGTGGGATAAAAAAA GCGGG CAGT CCCGC GGTGGGGATCAGTCC Pnap_2117 2256481 - 2255498 - | hypothetical protein TERM 2743 2256257 - 2256269 + g 74 -10.5 -3.8211 | opp_overlap 2256240, overlap 2256262 GGCACCGATGTTGCC GCCCG CGC CGGGC TTGTTCTCGATGACG TERM 2744 2256262 - 2256300 + g 72 -7.3 -4.13343 | gap 1, opp_overlap 2256288, overlap 2256257 2256289 2256295 CGATGTTGCCGCCCG CGCCGGGCTTGTTC-TCG ATGA CGAAGGGCTGGCCCAGCG TTTTGCCGGCTTTCT Pnap_2118 2256801 - 2256523 - | muconolactone delta-isomerase Pnap_2119 2257997 - 2256813 - | muconate and chloromuconate cycloisomerases TERM 2745 2257476 - 2257512 + g 76 -7.4 -4.25104 | opp_overlap 2257502, overlap 2257464 GTCCTGTGCCGGACT GCGGGCGCCG-ATCTTCA TCT TGAAGATGCGGTGGC-GC TTTTGCTCCAGGCGC TERM 2746 2258103 - 2258083 - H 83 -9.8 -4.16842 | TTTATTTGGAACAAA TCGTTCGA TACAT TCGAACGA TTGAAGTACGATGAG TERM 2747 2258377 - 2258345 - g 74 -9.2 -3.90112 | overlap 2258349 GTGCCTTGAAGGAAA TCGAGGCCGGCC-GCA TGG CGCTGGCCGACCT-GA GCGGGCTGCAGTCCG TERM 2748 2258674 - 2258698 + G 71 -12.8 -3.01791 | opp_overlap 2258674, overlap 2258691 AGCCTGGCCATGAAA GCGCTGGCGG GCATG CCGCTGGCGC TGTTGCCGCGCAGCT TERM 2749 2258938 - 2258964 + G 73 -11.4 -3.54741 | overlap 2258938 TTGTGGCGGCGCGGT GCCTCGCGCAGC GCG GCGGCGCGGGCC TTTGCGGCCCTGCTG Pnap_2120 2258122 - 2259000 + | LysR family transcriptional regulator Pnap_2121 2259786 - 2259016 - | alpha/beta hydrolase fold TERM 2750 2259105 - 2259159 + g 73 -12.7 -3.14931 | gap 1 CGTCCAGGCTTTGCA GCTGCG-CGCCCGCAATGCCCTTGGC AATC GCCTGCGACATGGCGGGCGGCGTGGC TTCGTCACGGCTACC TERM 2751 2259531 - 2259505 - G 75 -13.7 -3.05384 | GTGGCGCGCACCCAA TGCCTGGGCGG TCATG CCGCCCAGGGA CAGGCCGACGAAATG Pnap_2122 2260404 - 2259895 - | MarR family transcriptional regulator TERM 2752 2261060 - 2261033 - g 71 -12.6 -3.01712 | overlap 2261049 TGGCCCTGTCCAAGA CCCTGGCGCGTG AACA CGCCCGCCAGGG CATCACCGTCAATGT Pnap_2123 2260531 - 2261298 + | short-chain dehydrogenase/reductase SDR TERM 2753 2262230 - 2262212 - g 71 -5.2 -4.4078 | TGCGCTGAAGGAAAA GCGCAAGC CCG ACTTCCGC AAGTTCGCCAAGTAA Pnap_2124 2261463 - 2262245 + | naphthoate synthase TERM 2754 2262646 - 2262605 - g 79 -10.9 -3.85698 | gap 1, opp_overlap 2262582 CCCTGGCTGCACAAA CTCACCCAGGGCGA-GGC CATTTGC GCCATCGCCCTGACCGAG CCGCGCGGCGGCTCC Pnap_2125 2262263 - 2263420 + | acyl-CoA dehydrogenase domain-containing protein Pnap_2126 2263454 - 2265097 + | cyclohexanecarboxylate-CoA ligase TERM 2755 2266118 - 2266092 - g 74 -5.2 -4.56914 | gap 1 CCAGCGAAACCAAAA TGCTGTCCGCC CTGATC AG-GGACAGCA AGATCAACGTGGATT Pnap_2127 2265137 - 2266135 + | hypothetical protein TERM 2756 2266164 - 2266200 + F 71 -10.1 -3.56704 | opp_overlap 2266165 2266197, overlap 2266158 2266166 TTTCAGGCATCGAAC AGGCCGTTTGCGCATGC TGT GTATGCGCAAGCAGCTA TTGATTTAATAGCAC TERM 2757 2266166 - 2266198 + F 95 -14.9 -3.35849 | opp_overlap 2266165 2266197, overlap 2266164 2266158 TCAGGCATCGAACAG GCCGTTTGCGCATGC TGT GTATGCGCAAGCAGC TATTGATTTAATAGC Pnap_2128 2266235 - 2267014 + | enoyl-CoA hydratase/isomerase TERM 2758 2267411 - 2267359 - g 71 -6.2 -4.35116 | opp_overlap 2267370 2267374, overlap 2267361 CACGCCAGAGCAAAA GAGCG-ACTACCTGCCCAAGGTCGCC AGC GGCGAGC-TGGTCATGTCGTTCGCGC TGACCGAGCCCGACG TERM 2759 2267657 - 2267640 - g 75 -4.1 -4.79955 | gap 1 AGACGGACAAGAAAA TGG-GCCA GCG CGGCACCA AGACCTGCGACGTGA Pnap_2129 2267042 - 2268202 + | Acyl-CoA dehydrogenase Pnap_2130 2268251 - 2269435 + | acyl-CoA dehydrogenase domain-containing protein TERM 2760 2270068 - 2270045 - g 84 -3.9 -5.10208 | gap 1, overlap 2270067 GAAGGCCAAGAAAAA GCC-GCTTGA AAATG TCAAGCCAGC CGATCTGGGCGTCGA Pnap_2131 2269455 - 2270204 + | electron transfer flavoprotein beta-subunit Pnap_2132 2270235 - 2271167 + | electron transfer flavoprotein, alpha subunit Pnap_2133 2271368 - 2273371 + | acetoacetyl-CoA synthase Pnap_2134 2273368 - 2274405 + | alcohol dehydrogenase TERM 2761 2275117 - 2275067 - g 81 -13.1 -3.73953 | gap 1 AGCAGGCCGAGCAAA CCGCGCTGCGCGCCGGCAAGCGCC GGCC GGC-CGTGCTGGCGGCCATCGCGG CCGTCAAGAATGCCG TERM 2762 2276017 - 2276040 + G 77 -14.6 -2.88861 | gap 1 CGCAAGGCGCAGGCC GC-CTCGCGCG ATC CGCGCGAGCGC TATGTGGGCATCCTC Pnap_2135 2274412 - 2276472 + | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding TERM 2763 2277186 - 2277147 - g 77 -4.3 -4.83615 | gap 2, opp_overlap 2277125, overlap 2277149 CATCCCCCAGAAAAA GGGC-GATGC-CATCCTTG TGGA CCAGGACGAGCATCCGCGC GCCACCTCGATGGAC Pnap_2136 2276503 - 2277708 + | beta-ketoadipyl CoA thiolase TERM 2764 2278206 - 2278184 - T 72 -4 -4.7889 | overlap 2278185 ATAAAGAGCCAAAAA CCACACCGAC AGG GGCAGTTTGG TGTGCTCGAACACCG Pnap_2138 2279328 - 2278333 - | hypothetical protein TERM 2765 2279261 - 2279236 - G 74 -11.7 -3.53012 | CGGCCGGTCGGGAAA CGGCGCCTGCG CCGA CGCGGGGGCCG CGAGGCCGGCCGCCA TERM 2766 2279419 - 2279372 - R 74 -7.8 -4.12188 | gap 3, overlap 2279375 TCAGCATCGTTAAAA CT-ACGTCAGCGCATGC-AGCGC CGCCT GCGCCAGCGTGCGCTG-CGCCAG GAGCAATACCGGCGC TERM 2767 2279415 - 2279375 - R 76 -11.9 -3.09004 | overlap 2279372 GCATCGTTAAAACTA CGTCAGCGCATGC-AGCGC CGCCT GCGCCAGCGTGCGCTG-CG CCAGGAGCAATACCG Pnap_2139 2280244 - 2279372 - | HpcH/HpaI aldolase TERM 2768 2279980 - 2280011 + g 70 -12.2 -3.14132 | CGCGCAGGGCGATCA GGTCGTCGGCATGC CAGG GCGTGCCGGCGGCG TTGATGCGCACCAGC Pnap_2140 2281622 - 2280237 - | MmgE/PrpD family protein TERM 2769 2280622 - 2280577 - G 71 -9 -3.73224 | overlap 2280578 GCATCGTCCAGGAAA TGCCGGTCGAAC-TCGGCCAGG CCGG CCTGGCCGAAGCGCG-CCACCA GCGCCAGCACCGTGC TERM 2770 2281650 - 2281686 + r 93 -10.9 -4.51743 | opp_overlap 2281649 2281650, overlap 2281652 TTTTATGAATCAAAT TGGCTGTTTGCGCTTTA TGG TCATGCGCAAGCAGCTA TTTATTTGATAGTGA TERM 2771 2281652 - 2281684 + r 82 -11.3 -3.86206 | opp_overlap 2281650 2281649, overlap 2281650 TTATGAATCAAATTG GCTGTTTGCGCTTTA TGG TCATGCGCAAGCAGC TATTTATTTGATAGT Pnap_2141 2282906 - 2281725 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 2772 2282594 - 2282622 + g 70 -7.9 -4.07568 | opp_overlap 2282591, overlap 2282603 2282603 CCTCGAACGACAGCC CCATGCGCGCCGC CGC GCCGGGCGCGAGG TTTTGCACCAGCACG Pnap_2142 2284085 - 2282922 - | acyl-CoA dehydrogenase domain-containing protein Pnap_2143 2285014 - 2284112 - | hypothetical protein TERM 2773 2284769 - 2284749 - G 93 -8.1 -5.00884 | overlap 2284751 ACGGGTGGCAAAAAA CCGCCGCGC CGG GCGTGGCCG TCGGGTCCGATCTCG TERM 2774 2284833 - 2284809 - G 77 -2.7 -5.00616 | overlap 2284811 2284813 TGCTGCGGCAAAAAA TACAGCCAGTG CCA CAGCGGCGGCA GCGCCGTTCCAGGCC TERM 2775 2285205 - 2285219 + G 76 -10 -3.91897 | CAACCTGACCCGCGC TGCTGC CCG GCAGCA TTTGTCGCTGGCGGC Pnap_2144 2285137 - 2286045 + | LysR family transcriptional regulator TERM 2776 2286131 - 2286141 + F 70 -6.8 -4.19817 | TTCTTTTTCTTCACG CTGC TGT GCAG TTTTGCATCGCTCCG TERM 2777 2286481 - 2286470 - g 77 -2.2 -5.03314 | overlap 2286472 TTCAGCCCGAAAAAA GACC AGCT GATC GTCTGCAGGGAAGAA Pnap_2145 2286227 - 2286541 + | hypothetical protein TERM 2778 2286550 - 2286527 - T 95 -15.2 -3.53012 | TTTGGCCCGTTGAAA CGCGCGCCCC AGTA GGGCCGCGCG GCGCGGCTCACGCGA Pnap_2146 2288015 - 2286558 - | cobyric acid synthase CobQ TERM 2779 2286619 - 2286595 - G 71 -11.4 -3.53091 | overlap 2286596 ACGCCCGGCTCGAAA TGCTGGCCGA TGTAG TCGGCCAGCC CGTCGAACACCGATT TERM 2780 2286618 - 2286596 - G 75 -14.9 -2.71712 | overlap 2286595 CGCCCGGCTCGAAAT GCTGGCCGA TGTAG TCGGCCAGC CCGTCGAACACCGAT TERM 2781 2286781 - 2286820 + g 71 -9.2 -3.73775 | gap 1, overlap 2286782 GCGATGTCGCCCGCC GCCGCCATGGCC-GAATGC CGC GCGGTCTGGCCGTGGTGGA TTTCGTAGCCCTGCA TERM 2782 2286782 - 2286819 + g 70 -12.7 -2.84051 | gap 1, overlap 2286781 CGATGTCGCCCGCCG CCGCCATGGCC-GAATGC CGC GCGGTCTGGCCGTGGTGG ATTTCGTAGCCCTGC TERM 2783 2287977 - 2288002 + g 74 -4.7 -4.64598 | gap 1 GCTCTTGCCGGCGTT GC-TGGTGGTGC CTA GCACCATGACGC TTTTTGCGGTCATTG Pnap_2147 2289055 - 2288012 - | aminotransferase, class I and II Pnap_2148 2290038 - 2289055 - | cobalamin biosynthesis protein CobD Pnap_2149 2290738 - 2290046 - | cob(II)yrinic acid a,c-diamide reductase TERM 2784 2290702 - 2290748 + g 75 -13.7 -3.05596 | gap 1, overlap 2290704 CCTGGCGCTCGGGCA GGCTGAAGGCGTGGCTGGCGCC ATCA GGCG-CGTTCACGCCCTCAGTC TTCAATGCCGCGCTG TERM 2785 2290704 - 2290746 + g 71 -12.7 -3.08679 | gap 1, overlap 2290702 TGGCGCTCGGGCAGG CTGAAGGCGTGGCTGGCGCC ATCA GGCG-CGTTCACGCCCTCAG TCTTCAATGCCGCGC Pnap_2150 2291324 - 2290743 - | cob(I)alamin adenosyltransferase Pnap_2151 2292107 - 2291331 - | uroporphyrin-III C-methyltransferase TERM 2786 2291586 - 2291576 - G 86 -6.8 -5.08824 | overlap 2291577 CGCCCATGTAAAAAA CCAG GGT CTGG CCGGGCCGCGCCAAA Pnap_2152 2292438 - 2292088 - | hypothetical protein Pnap_2153 2293430 - 2292435 - | precorrin-3B C17-methyltransferase Pnap_2154 2294254 - 2293427 - | hypothetical protein TERM 2787 2293892 - 2293856 - G 89 -12.9 -4.14397 | AGGCCAGAAATGAAA GCTGAGCCAGCCAGCGG CGG CCACCAGCAAGCCCAGC GGCAAGGAACCGGCG TERM 2788 2294231 - 2294213 - G 73 -13.1 -3.21218 | ACTGCCCACCAGCAA GGCGGCG GCCAG CGCCGCC CAGATCAGTCGTTGA Pnap_2155 2294458 - 2294270 - | hypothetical protein Pnap_2156 2294932 - 2294498 - | cobalamin (vitamin B12) biosynthesis CbiG protein TERM 2789 2294535 - 2294564 + g 71 -9.1 -3.68359 | opp_overlap 2294534 2294533, overlap 2294538 CGGGCTAATGAAACC GTGGCGTGGCGCC CGTC GGCGCCCCGGTGC TTGTGCTTTTCGACC TERM 2790 2294626 - 2294602 - G 75 -14.3 -2.70932 | opp_overlap 2294619 2294623 CCGTGGCGGGAAGCA CTGGCCCCATC GCC GATGCGGCCAG CAGCGCGGCGGCTTC Pnap_2157 2295690 - 2294929 - | cobalamin (vitamin B12) biosynthesis CbiG protein TERM 2791 2295466 - 2295456 - G 75 -3.2 -4.84642 | overlap 2295457 2295459 GCGAAACGAAGAAAA CGAC CTG GTCA AACCCGGTGAACAGC Pnap_2158 2296508 - 2295687 - | precorrin-2 C20-methyltransferase TERM 2792 2295847 - 2295860 + g 72 -3.7 -4.65895 | opp_overlap 2295840 2295839, overlap 2295840 2295848 TGAACAATCCGCTCG ACCGG CGAG CCGGC TTTTTCAATGAAGCG Pnap_2159 2297815 - 2296505 - | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit TERM 2793 2296863 - 2296886 + g 100 -3.8 -5.47218 | gap 1, overlap 2296841 2296866 GCCCGGCGGTTGGCC CGCACGATGGC GCT GTCATCGA-CG TTTTTTTCAATCGCG cbiD 2298909 - 2297812 - | cobalt-precorrin-6A synthase TERM 2794 2297923 - 2297907 - G 72 -13.7 -2.71364 | GCAGGGTCTGAATCA CGCGCTG CGC CAGCGCG GTGTGAAAGGCCGTG TERM 2795 2298838 - 2298895 + g 100 -15.5 -4.88736 | gap 2, opp_overlap 2298856, overlap 2298841 CAGCGTGGCCGCGCG CGCCGCCGCCGCCGAACACGCGCCGGT GGTGAA GCCGGTGCGCGTGCCGCG-CGGCG-CG TTTTTGTCCATCATG TERM 2796 2298841 - 2298893 + g 84 -16.9 -2.70788 | gap 1, opp_overlap 2298856, overlap 2298838 CGTGGCCGCGCGCGC CGCCGCCGCCGAACACGCGCCGGT GGTGAA GCCGGTGCGCGTGCCGCG-CGGCG CGTTTTTGTCCATCA Pnap_2161 2299592 - 2298906 - | precorrin-8X methylmutase CbiC/CobH Pnap_2162 2300554 - 2299589 - | cobalamin (vitamin B12) biosynthesis CbiX protein TERM 2797 2300002 - 2300014 + g 76 -6.2 -4.56597 | TGCCCAGCAGGCTTT GCCG CTGCA CGGC TTTTTCAAGGCGCGG TERM 2798 2300468 - 2300437 - G 79 -10.8 -3.95852 | gap 1, opp_overlap 2300467, overlap 2300438 ACTCGATGAAGCAAA CCTCGATGCGCCAGC CTG GCTGGCGCA-CGCGC CACTGCTGCGCAAAG TERM 2799 2300467 - 2300438 - G 78 -14.3 -2.97029 | gap 1, overlap 2300437 CTCGATGAAGCAAAC CTCGATGCGCCAGC CTG GCTGGCGCA-CGCG CCACTGCTGCGCAAA Pnap_2163 2301375 - 2300551 - | precorrin-4 C11-methyltransferase TERM 2800 2301312 - 2301279 - G 86 -8.8 -4.64334 | gap 1, overlap 2301266 2301281 AACCGGCGAACAAAA TAGCGCCGGCGCGCT CGATC AGCGC-CCGGCCCTT CACGGTGATGAGTTC TERM 2801 2301310 - 2301281 - G 79 -11.4 -3.93367 | gap 1, overlap 2301266 2301279 CCGGCGAACAAAATA GCGCCGGCGCGCT CGATC AGCGC-CCGGCCC TTCACGGTGATGAGT Pnap_2164 2302923 - 2301958 - | auxin efflux carrier Pnap_2165 2303852 - 2302953 - | 6-phosphogluconate dehydrogenase, NAD-binding TERM 2802 2303984 - 2304039 + r 93 -10.4 -4.50241 | gap 1, opp_overlap 2303994 2303999, overlap 2303999 TGGCCCGGCATCTGC CGCTCAAAGACAAAACGCCCCGTGCTT TGC GAGCACGGGGCGTTCTGGATG-GAGGG TTTTACTTGGTCTTT TERM 2803 2304030 - 2303994 - R 100 -23.2 -3.34398 | opp_overlap 2303984 2303999, overlap 2303999 TCTGCCGCTCAAAGA CAAAACGCCCCGTGCT TTGCG AGCACGGGGCGTTCTG GATGGAGGGTTTTAC TERM 2804 2304025 - 2303999 - R 100 -19.5 -4.78848 | opp_overlap 2303999 2303984, overlap 2303994 CGCTCAAAGACAAAA CGCCCCGTGCT TTGCG AGCACGGGGCG TTCTGGATGGAGGGT TERM 2805 2303999 - 2304025 + r 100 -20.2 -3.35798 | opp_overlap 2303994 2303999, overlap 2303984 CGCTCAAAGACAAAA CGCCCCGTGCTT TGC GAGCACGGGGCG TTCTGGATGGAGGGT TERM 2806 2304099 - 2304113 + r 74 -2.1 -5.07053 | ATCAGACAGATCACT TCAGT TCAGC GCTGA TTTTTTGCCGTCCTT Pnap_2166 2305229 - 2304099 - | extracellular ligand-binding receptor TERM 2807 2304337 - 2304348 + g 76 -5.8 -4.59853 | TGGCCAGGATATTTG GCGT CGTA ACGC TTTTTCCAGGCTTCG TERM 2808 2304642 - 2304669 + g 78 -7 -4.59853 | gap 1, opp_overlap 2304644, overlap 2304644 GTACTGCTCATCGAC AACCGTCAT-GCC CTT GGCCATGGCGGTC TTTTTGAACACTTCG TERM 2809 2304644 - 2304667 + g 74 -9.6 -3.91164 | gap 1, opp_overlap 2304644, overlap 2304642 ACTGCTCATCGACAA CCGTCAT-GCC CTT GGCCATGGCGG TCTTTTTGAACACTT TERM 2810 2304711 - 2304728 + g 88 -6.3 -5.22039 | gap 1 GCCGTAAGCGGTACG GTCGTCGA TGA TCG-CGAC TTTTTTCAGTTTCAG Pnap_2167 2305753 - 2305406 - | hypothetical protein Pnap_2168 2306190 - 2305750 - | DNA polymerase III subunit chi TERM 2811 2306041 - 2306029 - G 72 -7.7 -4.183 | GCAATGCGGAACAAA TTCCG TCG CGGAA AAACTCCACAGCAGC Pnap_2169 2307719 - 2306187 - | leucyl aminopeptidase TERM 2812 2306595 - 2306585 - G 77 -2.4 -5.0538 | overlap 2306587 CGTTATTGGAAAAAA GCCC GCT GCGC ACCCCGCCCAGCGCC TERM 2813 2306745 - 2306793 + g 73 -8.8 -4.07568 | gap 1 GATGGTCTGGCCACT CATGCT-GGTGACCACGTCGCCG GGCT TGATGGCGCGGTCGCCGGGCATG TTTTCGCAGGCCGGG TERM 2814 2308069 - 2308088 + G 95 -10 -4.57073 | gap 1, opp_overlap 2308052, overlap 2308069 2308070 2308083 TGGTGTGGTTCACCA G-CGGCCAG GGG CTGGCCGGC TTTTTGCGCCCGCTG TERM 2815 2308070 - 2308086 + G 71 -13.7 -2.60032 | overlap 2308069 2308069 2308083 GGTGTGGTTCACCAG CGGCCAG GGG CTGGCCG GCTTTTTGCGCCCGC TERM 2816 2308231 - 2308271 + G 72 -2.4 -4.72272 | gap 1 ACCTGGACCGCATCA CGCCCGGCGTGTTCCAGGA ATCC TCCAGCGGCAA-CCGGGTG TTTTTCATCGACCGC Pnap_2170 2307798 - 2308919 + | permease YjgP/YjgQ family protein TERM 2817 2309124 - 2309153 + G 73 -6.5 -4.33274 | overlap 2309126 ACCACTTGTATGAAC TGCTGCCGATC TCGGTCCT GATTGGCAGTA TTTTCGTCATGTCGC TERM 2818 2309400 - 2309390 - g 74 -2.4 -4.8622 | TGGCTGAAGGAAAAA CAGG TGT CCAG CAACTTCATCGTCAA Pnap_2171 2308916 - 2310055 + | permease YjgP/YjgQ family protein Pnap_2172 2310091 - 2310468 + | cobalamin (vitamin B12) biosynthesis CbiX protein TERM 2819 2310893 - 2310925 + G 78 -9.8 -4.08767 | gap 1 CCAGGCCCGCTATGT GCT-GCCACAGCCGG TCGC CCGGCTGCGGGAAGC TTTTCCAAAAGTCAA Pnap_2173 2310573 - 2311517 + | transcriptional regulator CysB-like protein TERM 2820 2312201 - 2312231 + G 80 -14.6 -3.21099 | opp_overlap 2312197, overlap 2312196 2312197 GCTCCACCAGAGCGC GGCGCGCTTTGCCG GAC TGGCGGCGCGCGCC TTCATCGTCAGCAGC Pnap_2174 2311521 - 2312705 + | putative aminotransferase Pnap_2175 2312796 - 2312954 + | hypothetical protein TERM 2821 2312978 - 2312999 + T 100 -14.5 -5.26875 | opp_overlap 2312978 TTGCACGATGAAAAA GGGCCTTGT TGTT ACAAGGCCC TTTTTTCGTTCCGCA TERM 2822 2312999 - 2312978 - T 100 -14.5 -4.77036 | opp_overlap 2312978 TTGCACGATGAAAAA GGGCCTTGT TGTT ACAAGGCCC TTTTTTCGTTCCGCA Pnap_2176 2316935 - 2313015 - | ATP-dependent helicase HrpA TERM 2823 2314586 - 2314602 + g 70 -7.9 -3.98484 | opp_overlap 2314586, overlap 2314579 CGTCTTGCGTCAAAA GCAGCAG ATT CGGCTGC TTTCTGGCTTCGGTT TERM 2824 2314602 - 2314586 - G 70 -7.9 -4.07568 | opp_overlap 2314586 2314579 CGTCTTGCGTCAAAA GCAGCAG ATT CGGCTGC TTTCTGGCTTCGGTT TERM 2825 2314893 - 2314934 + g 100 -11.6 -5.252 | opp_overlap 2314889 2314887 GTTGTAAACCACCAG GCCGTACAGCGTGGC-GCGC TCCA GCGCGGTCAC-CTGCGCGGC TTTTTTCTCCCAGTG TERM 2826 2316599 - 2316567 - G 73 -12.9 -3.14132 | gap 1 CGTTTCGGCCAGCAA GATGCCGTCGGTCA TCAGCT TGACCGACG-CATC GCGGCTCAGCCGGTC TERM 2827 2316641 - 2316655 + g 79 -9.2 -4.1964 | opp_overlap 2316638 2316641 CCTTGTAGCCAACGA CGTCGC CGA GCGGCG TTTTCAGCTCTTCGG Pnap_2177 2317118 - 2318470 + | N-acetylglutamate synthase Pnap_2178 2319972 - 2318500 - | hypothetical protein TERM 2828 2318610 - 2318599 - G 82 -3.6 -5.14965 | ATTTCCAGGAAAAAA CAGG CCCG CCCG CACATCCAGCCCGAG TERM 2829 2318664 - 2318683 + g 80 -5.6 -4.72272 | overlap 2318673 GGAATCCGAGCACGA TGTCGAGC GCGC GCCCGGCA TTTTTGCTCAGCCGC TERM 2830 2319851 - 2319869 + g 75 -11.6 -3.64703 | opp_overlap 2319815 GCCAGCTGCGTGCCG GCGGCGCC ATC GGCGGCGC TTTCCATGACCAAGG Pnap_2179 2320836 - 2320099 - | hypothetical protein TERM 2831 2320451 - 2320436 - G 78 -6.8 -4.56597 | CCGTTCTTGTAAAAA TCGACG TCTT CGCCGA AATAGAACACGTCCC Pnap_2180 2323993 - 2320859 - | acriflavin resistance protein TERM 2832 2321756 - 2321744 - G 76 -9.1 -4.10161 | overlap 2321746 2321747 CACCAGGCCGGAAAA CACGG TCG CCGTG GAGCGGCGCACATCG Pnap_2181 2324999 - 2324046 - | hypothetical protein Pnap_2182 2325765 - 2325034 - | hypothetical protein TERM 2833 2325110 - 2325072 - G 77 -4.5 -4.82901 | CTTTGCCGACAAAAA CGAAAAGGGCCACGTAC TTTCC GTCCGCACCCTTTTTCG CGCCGACAAAGACCC TERM 2834 2325150 - 2325164 + g 85 -10 -4.36914 | CCGTGATCAGGCTCC TGTCGC CGA GCGACA TTTTGTGGACCGGCG Pnap_2183 2328968 - 2325804 - | acriflavin resistance protein TERM 2835 2326264 - 2326211 - G 74 -14.3 -2.64735 | gap 1 AGCCGAGCGAGATGA CCCGGTCGGCGGCGAAGGTCGCCAGC ACC GC-GCCGACCAGCGCCGCCGGGAGGG CGAGGAAGATCATGC TERM 2836 2328984 - 2329007 + r 74 -6.6 -4.34486 | opp_overlap 2328992 2328993, overlap 2328981 2328993 AGATCACTCCATTGC CTGGACAACG GGCG CGGCGTCCAG TTATTTGTTATTCGT Pnap_2184 2329455 - 2329015 - | hypothetical protein Pnap_2185 2329588 - 2330295 + | dienelactone hydrolase TERM 2837 2331243 - 2331217 - g 86 -7.3 -4.68593 | gap 1 CTGATCACCGAAAAA GGCTT-CACCGC CATT GCCGTGGAAGCC GACTGGCCCGATGCC TERM 2838 2332297 - 2332277 - g 71 -9 -3.78022 | gap 1 TCCACATCGACGAAA CCAGCGCGC TGGA GC-CGCTGG ACAAGGGGCCGGTGT Pnap_2186 2330308 - 2332356 + | erythromycin esterase Pnap_2187 2333738 - 2332362 - | hypothetical protein TERM 2839 2333029 - 2332987 - G 76 -6.2 -4.57341 | gap 1, opp_overlap 2332986 2333003 AAGCGGCTGGAAAAA TGCTCGGTC-CAGCCCGGC TGGGGT GCCGGACTCTGGCCGATCA GCTCTTTTAAAAACT TERM 2840 2333354 - 2333313 - G 100 -16.6 -4.18018 | gap 1, opp_overlap 2333315 2333346 GTGGCGCATGGAAAA CTGCACGCCCGCGCTGCGC AGGCG GTGCAGC-CAGGCGCGCAG CAGCGGCGCGGCCTT Pnap_2188 2334360 - 2333971 - | carboxymuconolactone decarboxylase Pnap_2189 2334764 - 2334372 - | MerR family transcriptional regulator TERM 2841 2334804 - 2334815 + r 85 -4.4 -5.1675 | opp_overlap 2334804 CGCGCTCCAAGTCAA GTGA AATA TCAC TTTTTTCATGGCTCG Pnap_2190 2335282 - 2334845 - | hypothetical protein TERM 2842 2335335 - 2335317 - R 100 -4.5 -5.84381 | opp_overlap 2335318, overlap 2335318 CGAGGAAGAAAAAAA TCCTCAC GCGCG GTGAGGT TTGGAAAGCAGCCCG TERM 2843 2335334 - 2335318 - R 77 -8 -4.09002 | opp_overlap 2335318, overlap 2335317 GAGGAAGAAAAAAAT CCTCAC GCGCG GTGAGG TTTGGAAAGCAGCCC Pnap_2191 2335736 - 2335320 - | regulatory protein, ArsR TERM 2844 2335428 - 2335485 + g 76 -14.1 -3.14051 | gap 3, opp_overlap 2335423, overlap 2335463 GGCGGCAAAGGCGGC GCGGCCGGTGGCGGTCAGCGCGTAGGTG GTCTG CAGCCGCGCGCCG-CCGCC-CCGGC-GC TCTTGCTGCAGGTAG TERM 2845 2335463 - 2335515 + g 91 -9.7 -4.62069 | gap 3, overlap 2335428 CGTAGGTGGTCTGCA GCCGCGCGCCGCCG-C-CCCGGC-GC TCTT GCTGCAGGTAGTCGGCGGCGAGCAGC TTTTTCAGGTGCGCG Pnap_2192 2336824 - 2335733 - | hypothetical protein TERM 2846 2336673 - 2336623 - G 74 -14.8 -2.64933 | gap 3 CACCCAGCCACAGCA TG-GCCAGGGCCGCC-TGCAGGGCC GGCT GGCCCTGCAAGGCGGG-CAGGCGCA GCAGCGGGTCGGTGG TERM 2847 2336846 - 2336904 + r 81 -12.7 -3.07655 | opp_overlap 2336877 2336880 2336883 GACTCCCGATTTTTA CCGTTAACTCTGCAATTCAGAGT ACGGAAAATTATA ACTCTGCAATGCAGAGTTAGCGG GTGTTTTTTACCGGC TERM 2848 2336900 - 2336880 - R 81 -12.7 -3.11922 | opp_overlap 2336846, overlap 2336877 2336883 GAGTACGGAAAATTA TAACTCTGC AAT GCAGAGTTA GCGGGTGTTTTTTAC TERM 2849 2336897 - 2336883 - R 74 -10 -3.6943 | opp_overlap 2336846, overlap 2336880 2336877 TACGGAAAATTATAA CTCTGC AAT GCAGAG TTAGCGGGTGTTTTT Pnap_2193 2340319 - 2337008 - | UvrD/REP helicase TERM 2850 2337546 - 2337532 - G 86 -7 -5.08824 | opp_overlap 2337540 CGGGCAGGTAAAAAA CCTCGG CGG CCGGGG CTGGGAAGCCAGCCG TERM 2851 2337765 - 2337811 + g 78 -14.2 -3.05384 | overlap 2337752 TCGCGCTTGCGGGCG GCCTGCTCGGCGGCCAGCGC TTCCTGC GCGCAGGCCGGCGGTCTGGC TTCGCTGACCAGAAA TERM 2852 2338923 - 2338883 - G 83 -15.4 -3.16564 | gap 1, overlap 2338910 2338911 GTCGCAGCTGAGCAA GTCGCCGCCCAGCCCCTCG ACCA CGAAGGCCTGCGCGGCG-C GGAACACCTGCGGCT TERM 2853 2339011 - 2338988 - G 81 -6.6 -4.72272 | gap 1, overlap 2338990 GTCGCCGACCAAAAA CACGCTGGGCG CCG CGCCC-GCGCC GCCGTAGCCGCTCAG TERM 2854 2339009 - 2338990 - G 82 -11.4 -3.98256 | gap 1, overlap 2338988 CGCCGACCAAAAACA CGCTGGGCG CCG CGCCC-GCG CCGCCGTAGCCGCTC TERM 2855 2339480 - 2339456 - G 78 -10 -4.07568 | gap 1 GCCCTTGGCGGAAAA GCTGGG-CGCA CTGG CGCGGCCCAGC GCCTTGGCGGCCGCG Pnap_2194 2342883 - 2340316 - | exonuclease-like protein TERM 2856 2342708 - 2342686 - G 90 -2.6 -5.4505 | gap 1, opp_overlap 2342688, overlap 2342687 GCGCGGAACAAAAAA GGTGCCGCC GGCGTT GTCGGC-CC AGGTCTGGCGCGCCT Pnap_2195 2343052 - 2343384 + | thioredoxin TERM 2857 2343399 - 2343425 + F 100 -17.4 -6.23317 | opp_overlap 2343407 ACCGATTCTTTTCAG CCGGAAAATCCC TGA GGGGTTTTCCGG TTTTTTTGTTTTTCT TERM 2858 2343774 - 2343759 - g 82 -3.2 -5.1861 | gap 1 GCCATCATTAAAAAA CGCTCCA AAA CGG-GCG AAACCATCGTCGCCG TERM 2859 2344349 - 2344291 - g 71 -9 -3.68886 | overlap 2344292 2344295 AGGAAGTGACCGAAA TGCAGCGCAGCGTGCGCGCCGAA-GT-GAT TTC ATCGACCTTCGACGAGCCCGCCGCGC-GC- CACGTGCATGTGGCC TERM 2860 2344349 - 2344292 - g 75 -15 -2.8085 | gap 3, overlap 2344291 2344295 GGAAGTGACCGAAAT GCAGCGCAGCGTGCGCGCCGAA-GT-GAT TTC ATCGACCTTCGACGAGCCCGCCGCGC-GC CACGTGCATGTGGCC TERM 2861 2344347 - 2344295 - g 80 -16.4 -2.66451 | gap 2, overlap 2344291 2344292 AGTGACCGAAATGCA GCGCAGCGTGCGCGCCGAA-GT-GAT TTC ATCGACCTTCGACGAGCCCGCCGCGC GCCACGTGCATGTGG rho 2343636 - 2344898 + | transcription termination factor Rho TERM 2862 2344915 - 2344882 - f 81 -14.5 -2.62263 | overlap 2344903 2344904 AGTTCTTCGACATGA TGCGCCGCGGCGGCT AAGA AACGGCCGCCGCGCA GGGCCGCCCCAAGCA Pnap_2197 2345074 - 2345367 + | ribosomal protein L31 TERM 2863 2345400 - 2345420 + F 100 -15.5 -5.75342 | opp_overlap 2345400 CCGTCGGCAAAAAAA GCAGCCTGA GTT TCAGGCTGC TTTTTTTTCGGCAAA TERM 2864 2345420 - 2345400 - f 100 -15.5 -5.40072 | opp_overlap 2345400 CCGTCGGCAAAAAAA GCAGCCTGA GTT TCAGGCTGC TTTTTTTTCGGCAAA TERM 2865 2346732 - 2346747 + G 72 -2.4 -4.7078 | opp_overlap 2346725, overlap 2346734 TGGCCAAACTCGCGC CGGGGT TCGA GCCCAG TTTTTCGCTGATTGC Pnap_2198 2345489 - 2347258 + | hypothetical protein TERM 2866 2348166 - 2348182 + G 83 -9.4 -4.33165 | CGCGGGCCGGCCGGA CCACGC CAAAC GCGTGG TTTTCATGGGTTTGA Pnap_2199 2347255 - 2348622 + | MATE efflux family protein Pnap_2200 2349956 - 2348610 - | PAS/PAC sensor signal transduction histidine kinase Pnap_2201 2350681 - 2349953 - | two component transcriptional regulator Pnap_2202 2351382 - 2350678 - | phosphate uptake regulator, PhoU Pnap_2203 2352221 - 2351439 - | phosphate ABC transporter, ATPase subunit TERM 2867 2351894 - 2351915 + g 71 -8.7 -3.85817 | opp_overlap 2351894 2351895, overlap 2351895 CAATGTTGTCGTAAA TCGACATCG GGAA CGGTGTCGG TTTCTGGAACACCAT pstA 2353137 - 2352265 - | phosphate transporter permease subunit TERM 2868 2353044 - 2353025 - G 71 -5.6 -4.35091 | AACAGCCAGAACAAA CCGAAGGC CATG GCCGTCAG CGACAGCACCAGCGC TERM 2869 2353102 - 2353117 + g 81 -10.4 -4.18018 | overlap 2353101 AAATTTGGCCAGGCG CGCAGC CTGC GCTGCG TTTTGCATGACGGCG Pnap_2205 2354099 - 2353134 - | phosphate ABC transporter, inner membrane subunit PstC Pnap_2206 2355275 - 2354232 - | phosphate ABC transporter, periplasmic phosphate-binding protein TERM 2870 2354389 - 2354402 + g 75 -3.7 -4.75404 | overlap 2354390 AACTTGAGCGACGTA GCGGC CTGG GCCGG TTTTTCCTGGACTTT TERM 2871 2354558 - 2354568 + g 81 -6.8 -4.8048 | opp_overlap 2354557 2354558 CGGGCGAAACAAAGT TGCC GGC GGCA TTTTTCATCTGCGCA Pnap_2207 2355474 - 2355956 + | beta-Ig-H3/fasciclin TERM 2872 2355945 - 2355981 + F 73 -5.8 -4.4521 | gap 1, opp_overlap 2355967, overlap 2355947 2355964 GTTCTTTTGCCGCCG GCCAGCCGCTGATGCCT GACA AGGCATCC-CGACTGCC TTGTTTTTGACTCAT TERM 2873 2355964 - 2355984 + F 81 -6.9 -4.72386 | opp_overlap 2355967, overlap 2355947 2355945 GCCGCTGATGCCTGA CAAGGCA TCCCGAC TGCCTTG TTTTTGACTCATTTA Pnap_2208 2356086 - 2357240 + | twin-arginine translocation pathway signal Pnap_2209 2357244 - 2358806 + | Ppx/GppA phosphatase TERM 2874 2359038 - 2359019 - g 86 -7 -5.00616 | overlap 2359021 2359034 TCGCCCGCCAAAAAA GTCGCCGC CGAA GCAGCGCC TGTCACGCCAGCACC TERM 2875 2359101 - 2359079 - g 83 -4.7 -5.02074 | overlap 2359065 2359080 CCAGCCGTTAAAAAA GCGGCCGTC AGAAA GACGCCCGT CAAAAAAGTAGCGGC TERM 2876 2359204 - 2359194 - g 93 -8.2 -5.055 | overlap 2359195 CGAAGCCTGAAAAAA CGGC TGC GCCG CACAAAGCCAAAAAA Pnap_2210 2358878 - 2359438 + | hypothetical protein TERM 2877 2359468 - 2359436 - T 100 -11.9 -5.02074 | overlap 2359414 CCAGCGCTTAAAAAA TAAGCCGCCGCCAGC GCT GCAGCCGGCCGCTTA AAGCAGTTCGGGCGA Pnap_2211 2359939 - 2359466 - | putative phosphohistidine phosphatase, SixA Pnap_2212 2362051 - 2359946 - | polyphosphate kinase TERM 2878 2361213 - 2361194 - G 73 -2.8 -4.72272 | gap 1, overlap 2361206 CTGCTTGAGCAAAAA GCCCGACAG ATA CT-CCGAGC AGCCGGCCGACACTT TERM 2879 2361925 - 2361902 - G 88 -8 -4.88736 | overlap 2361892 CACGATGCACAAAAA GCGCAGCCGC TCCA GCAGCGGCAC GTCCACGCGCCGCGC Pnap_2213 2363982 - 2362240 - | Fis family transcriptional regulator Pnap_2214 2364308 - 2364006 - | hypothetical protein Pnap_2215 2366882 - 2364420 - | MscS mechanosensitive ion channel TERM 2880 2365583 - 2365558 - G 74 -6.1 -4.46212 | overlap 2365575 TGGTGGACCAGAAAA CTGCCCAGC GCCACATA GCCGAGCAG CAGCGCCAGCAAGCT TERM 2881 2366900 - 2366890 - R 91 -6.8 -5.14965 | ATGCGCATGAAAAAA CTGC ACC GCAG CTAGGCGGCAAGCCG TERM 2882 2366943 - 2366957 + r 86 -7 -5.0133 | opp_overlap 2366923 2366941, overlap 2366944 2366947 CCGCCATCATAGAGG CCCGCC AGC GGCGGC TTTTTTCAGGCGCTG TERM 2883 2366944 - 2366956 + r 74 -10.5 -3.60316 | opp_overlap 2366923 2366941, overlap 2366943 2366947 CGCCATCATAGAGGC CCGCC AGC GGCGG CTTTTTTCAGGCGCT Pnap_2216 2368212 - 2366977 - | major facilitator superfamily transporter TERM 2884 2368063 - 2368036 - G 72 -2.6 -4.73388 | gap 1, opp_overlap 2368056, overlap 2368038 AATCGTCATCAAAAA CCCCAGC-TCGGC ATA GCTGACGCCGAAG GCCTCCTTGAGCCAC Pnap_2217 2368314 - 2369156 + | AraC family transcriptional regulator Pnap_2218 2370677 - 2369253 - | aldehyde dehydrogenase TERM 2885 2369351 - 2369383 + g 77 -12.8 -3.58343 | gap 1 TCGACTGCACCAGCA CCGGC-TTTTGCTGC GTCA GCCGCAAAAAGCCGG TTTCGCCGTGGTAGG TERM 2886 2370414 - 2370426 + g 74 -4.7 -4.56597 | TTTCACCGGCTTCAT CCAGC GCG GCAGG TTTTTCAGCAGGCCG TERM 2887 2371133 - 2371168 + G 77 -15.4 -2.64735 | opp_overlap 2371130 2371129 TCTTCAAGAAACTGC GCGTGGTGCGCATGGT GGAC GCCAAGCGCAACACGC TGGTGTACCTGACCT Pnap_2219 2370766 - 2371269 + | CreA family protein TERM 2888 2371295 - 2371285 - f 74 -6.8 -4.27316 | CCGCGCAAGCCAAAA GCCT ACA AGGC GAGTTGATGCAGCGC TERM 2889 2372202 - 2372233 + G 82 -3 -5.20781 | gap 2, overlap 2372211 AGCTGCGGCTCAAGG GTCG--CGGCCTGC CGGGCA GCACGCCGGGCGAC TTTTATTTTGTGCTG Pnap_2220 2371382 - 2372359 + | heat shock protein DnaJ domain-containing protein TERM 2890 2372353 - 2372342 - f 75 -5.8 -4.63184 | AACCCACGCGAAAAA CTGG AAGG CCAG CCATGACAACGGACT Pnap_2221 2372356 - 2372676 + | MerR family regulatory protein Pnap_2222 2372785 - 2373009 + | putative addiction module antidote Pnap_2223 2373006 - 2373410 + | death-on-curing family protein Pnap_2224 2373537 - 2374613 + | Allergen V5/Tpx-1 family protein Pnap_2225 2377324 - 2374721 - | ATPase TERM 2891 2375116 - 2375159 + g 80 -14.7 -3.23216 | gap 1, overlap 2375120 CGTCCTTGATCTCCT CATACGGCTGGCCGACCATC GACTG GATGATCGGCGAGCCG-ATG TTGCTGGTCATGACG TERM 2892 2375120 - 2375156 + g 79 -16.6 -2.50492 | overlap 2375116 CTTGATCTCCTCATA CGGCTGGCCGACCATC GACTG GATGATCGGCGAGCCG ATGTTGCTGGTCATG TERM 2893 2375782 - 2375798 + g 100 -9.4 -5.08824 | overlap 2375774 TCTCCTCGGTGTCCT GCGCCT GCTTG AGGCGC TTTTTTAGCTCGGGC TERM 2894 2375918 - 2375932 + g 79 -11.4 -3.87815 | CATCACGTCCTTGGA GCCCAG CGC CTGGGC TTTCTCGGCCTGCCA TERM 2895 2376332 - 2376355 + g 86 -8 -4.72333 | overlap 2376335 GACCAGGATTTTCTG GAAGCGGCGC TCCA GCGCGGCGTC TTTTTCGATGTACTT TERM 2896 2376933 - 2376944 + g 70 -7.2 -4.07885 | overlap 2376927 GCTTCCAGCGCCTTG CGGC TCAA GCCG TTTTCGCGGGCAATC TERM 2897 2377021 - 2377001 - G 78 -4.7 -4.72986 | opp_overlap 2377010 2377010 CAGGGCGAGCAAAAA CAGCTCACC GGC AATGAACTG GTCATTGCGCTTGAT Pnap_2226 2377936 - 2377463 - | molybdopterin biosynthesis MoaE TERM 2898 2377537 - 2377548 + g 81 -7.2 -4.50686 | overlap 2377534 CATCGACCCAGCGCG CGCC CTCG GGCG TTTCTTCCTTTTTCC Pnap_2227 2378193 - 2377942 - | molybdopterin converting factor, subunit 1 TERM 2899 2377999 - 2377969 - G 72 -3.9 -4.57073 | gap 1, opp_overlap 2377990, overlap 2377970 CACGGGCGGGAAAAA GGCGAC-CTCGCAG CCGT CTGCCAGCAGCGCC GTCTCATCACGCATG Pnap_2228 2379466 - 2378207 - | molybdenum cofactor synthesis domain-containing protein TERM 2900 2378951 - 2378927 - G 70 -9.9 -3.54424 | TTGCAGCCTGCCAAA GCCGATGCTGG CGG CCAGCCCCAGC GACGCCGGGCTCAAG Pnap_2229 2380042 - 2379506 - | molybdopterin-guanine dinucleotide biosynthesis protein B Pnap_2230 2381548 - 2380121 - | threonine synthase TERM 2901 2381529 - 2381495 - G 73 -8.6 -4.10161 | gap 2 CAGGATTTCGCAAAA GCGCTTGCGCTCGGGC GCATT GCCCGA-CG-AGGCGC GGGTGGAGATGTAGT Pnap_2231 2382894 - 2381548 - | homoserine dehydrogenase TERM 2902 2382548 - 2382528 - G 74 -5.3 -4.56597 | opp_overlap 2382544 GCGCGGCGGCAAAAA TCTCGGTGC CAT GCACGGCGA GCAGCGCCTTGTTGG Pnap_2232 2384183 - 2382960 - | aminotransferase AlaT TERM 2903 2384558 - 2384593 + G 72 -4.1 -4.56597 | gap 1 TTGACGCCGGGCACT TTACC-GTTCTGGC GAACCTGAA GCCGGAACTGGTGA TTTTTGGCAGCGGCA Pnap_2233 2384380 - 2384772 + | hypothetical protein TERM 2904 2385168 - 2385151 - g 70 -9.9 -3.67864 | opp_overlap 2385151, overlap 2385139 GAATTCAAGTCGAAA CTCGAAC TTCC GTTCGAG TTGATTGCCGACACC Pnap_2234 2384902 - 2385378 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2905 2385489 - 2385468 - f 100 -10.8 -5.47218 | opp_overlap 2385468 CTGCATCCAAAAAAA GCCGCCCC GGCCTT GAGGCGGC TTTTTTTATTTCTGA TERM 2906 2385468 - 2385489 + F 100 -9.3 -6.02919 | opp_overlap 2385468 CTGCATCCAAAAAAA GCCGCCCCG GCCT TGAGGCGGC TTTTTTTATTTCTGA TERM 2907 2386759 - 2386776 + G 76 -5.5 -4.65895 | CGCGCTACGGTATCG GTCGGTG AAGA CATCGGC TTTTTACCTGGCACC TERM 2908 2386942 - 2386928 - g 76 -8.6 -4.20696 | GGATCAAGGTCAAAA GCATGA ACT TCATGC GGGGCCGAACCTTCC Pnap_2235 2385532 - 2387217 + | PhoH family protein TERM 2909 2387278 - 2387223 - T 73 -9.1 -3.90316 | opp_overlap 2387236, overlap 2387224 AGTGCTTTAAAAACA TTTTTCGGAAATTTTCCCCTGCGGC TGAAAT GCCGCAGGAAAATGCTTCCAGAAAA CAAAAAAGCCAAGTT TERM 2910 2387286 - 2387305 + T 100 -10.8 -5.80248 | opp_overlap 2387286 CCAGAAAACAAAAAA GCCAAGTT GAAT AACTTGGC TTTTTTTATGTCTTC TERM 2911 2387305 - 2387286 - T 100 -10.8 -5.86976 | opp_overlap 2387286 CCAGAAAACAAAAAA GCCAAGTT GAAT AACTTGGC TTTTTTTATGTCTTC TERM 2912 2387484 - 2387508 + T 95 -6.4 -5.40625 | gap 1, opp_overlap 2387476 2387474 2387484 TTACACAGGCCAAAA GCCCG-GAACT CAAA AGGTCGCGGGC TTTTTTATGTCCTAT TERM 2913 2387828 - 2387853 + T 91 -11.9 -4.18908 | opp_overlap 2387828 TTGAAAAACAAAAAA GCCCTGAAACG TCGT CATTTCAGGGC TTGTTTTACAGCTGT TERM 2914 2387853 - 2387828 - T 100 -14.1 -5.93252 | opp_overlap 2387828 TTGAAAAACAAAAAA GCCCTGAAACG TCGT CATTTCAGGGC TTGTTTTACAGCTGT Pnap_2236 2388540 - 2387875 - | hypothetical protein TERM 2915 2387941 - 2387930 - G 72 -4.4 -4.63932 | opp_overlap 2387930 TAGCCCTCAACAAAA TCTG GTTT CAGA ATTGTCTGCCCTATG Pnap_2237 2388932 - 2388552 - | hypothetical protein TERM 2916 2389061 - 2389084 + r 77 -11 -3.54408 | opp_overlap 2389062, overlap 2389058 2389062 AAGCTGGCTAATTTA ACCAGTGCAG GCGC CTGCACTGGC TTCATTTAGATGGAG TERM 2917 2389062 - 2389083 + r 83 -14.5 -2.72324 | opp_overlap 2389062, overlap 2389061 2389058 AGCTGGCTAATTTAA CCAGTGCAG GCGC CTGCACTGG CTTCATTTAGATGGA TERM 2918 2389083 - 2389062 - R 95 -14.5 -3.17194 | opp_overlap 2389062 2389061 2389058 AGCTGGCTAATTTAA CCAGTGCAG GCGC CTGCACTGG CTTCATTTAGATGGA Pnap_2238 2389708 - 2389151 - | hypothetical protein Pnap_2239 2390202 - 2389705 - | glycoside hydrolase family protein Pnap_2240 2390531 - 2390199 - | hypothetical protein TERM 2919 2390428 - 2390459 + g 100 -17.4 -4.07568 | gap 1 CTGGAGTGCGCCGTT GCCGAGGTGG-CGAG CTG CTCGACTACCTCGGC TTTTGCGGCCACGGC Pnap_2241 2390762 - 2390541 - | hypothetical protein Pnap_2242 2392642 - 2390759 - | hypothetical protein Pnap_2243 2393051 - 2392647 - | hypothetical protein Pnap_2244 2393446 - 2393048 - | hypothetical protein Pnap_2245 2394631 - 2393450 - | hypothetical protein Pnap_2246 2398156 - 2394656 - | putative transmembrane protein TERM 2920 2395402 - 2395437 + g 70 -12 -3.21276 | gap 1, overlap 2395401 GGTCATAGGCCGTTC CCTTGACCA-GCGGATT GGG AAGCTGCGTGGTCAAGG TGTTGTGCACGACCA Pnap_2247 2398561 - 2398163 - | hypothetical protein Pnap_2248 2401326 - 2398582 - | TP901 family phage tail tape measure protein TERM 2921 2399272 - 2399292 + g 76 -6.1 -4.59773 | overlap 2399262 CGCCTCGGTCGCCAC GCCGTTGTT GGC GGCAATGGC TTTTTCGGCATAGGC TERM 2922 2399538 - 2399557 + g 76 -12.8 -3.53012 | overlap 2399553 CCTTGATCTTCTCGG CGGCGGCC TGCA GGTCGCCG TTTGCGACCAAGGCG TERM 2923 2400674 - 2400719 + g 79 -13.9 -3.53012 | GTGCCGGCGCGCGAG GCATCGATGCCGGCGTCGGCG AACT TGCCGATGATGGCGACGGTGC TTTCCAGCGACAAGC TERM 2924 2401378 - 2401327 - R 84 -13.7 -3.05384 | opp_overlap 2401332, overlap 2401364 CGGGTTGGCAGGCAA TGCAGCGGCTTCAGCTGGTGCCG TTTTGG CAGCAACACTTGAAGCCGCTGCG GCGGGTTAAGGCCGC Pnap_2249 2402190 - 2401432 - | hypothetical protein Pnap_2250 2402641 - 2402222 - | hypothetical protein Pnap_2251 2402950 - 2402642 - | hypothetical protein Pnap_2252 2403351 - 2402989 - | putative RecA/RadA recombinase TERM 2925 2403410 - 2403375 - R 95 -14 -3.4158 | gap 1, opp_overlap 2403375 2403382 2403382 2403385, overlap 2403376 2403378 TCTAAAAAGGAGTAA GGAGGCACCGCCAGGCG CGG CGCCTGGCGGTGG-TCT GGCAGTGCTTAGCCT TERM 2926 2403409 - 2403376 - R 90 -17.5 -2.64225 | gap 1, opp_overlap 2403375 2403382 2403382 2403385, overlap 2403375 2403378 CTAAAAAGGAGTAAG GAGGCACCGCCAGGCG CGG CGCCTGGCGGTGG-TC TGGCAGTGCTTAGCC TERM 2927 2403408 - 2403378 - R 90 -16.8 -2.84946 | opp_overlap 2403375 2403382 2403382 2403385, overlap 2403376 2403375 AAAAAGGAGTAAGGA GGCACCGCCAGGCG CGG CGCCTGGCGGTGGT CTGGCAGTGCTTAGC TERM 2928 2403382 - 2403404 + r 100 -20.6 -2.63102 | opp_overlap 2403378 2403376 2403375, overlap 2403375 2403382 2403385 AGGAGTAAGGAGGCA CCGCCAGGCG CGG CGCCTGGCGG TGGTCTGGCAGTGCT Pnap_2253 2405443 - 2403419 - | peptidase S14, ClpP TERM 2929 2404068 - 2404093 + g 83 -12.7 -3.96148 | gap 1, overlap 2404069 GCCAGCAGCACTGTC T-CGCCACGATC GCC GATCGTGGCGTA TTTGTACTCGGCGCC TERM 2930 2404069 - 2404091 + g 100 -17.8 -3.57406 | overlap 2404068 CCAGCAGCACTGTCT CGCCACGATC GCC GATCGTGGCG TATTTGTACTCGGCG TERM 2931 2404961 - 2404947 - G 71 -9.2 -3.73224 | overlap 2404923 2404951 CCATCGGTGAGCAAA GCCAGC ATC GCCGGC TGGTCGCCGGTGCGG TERM 2932 2405010 - 2405046 + g 81 -15.1 -3.01791 | ATGGCAGCGGCCCAG GTGTCGAGCTGGTCGGC CAT GTCGCGCAGCTCGACGC TGTTGCCAGAAACAT TERM 2933 2405506 - 2405532 + r 80 -11.7 -3.36991 | opp_overlap 2405527 2405528, overlap 2405504 2405527 2405528 TGTCAAATTAAGTCC GTCCGGTTTTT AGGGG AGAAACCGGAC TATTTGCAGCTAGTC TERM 2934 2405539 - 2405552 + r 72 -3.8 -4.72556 | opp_overlap 2405528 2405527, overlap 2405528 2405527 AAACCGGACTATTTG CAGC TAGTCC GCTG TTTTGTCGTTTTTGC Pnap_2254 2407131 - 2405542 - | lambda family phage portal protein TERM 2935 2406631 - 2406616 - G 81 -10.4 -4.18494 | CATCTCCAGCGAAAA CGGCAC CTTG GTGCCG TGGTCCAGCCCGGGC TERM 2936 2406955 - 2406984 + g 100 -10 -5.0925 | TGCCGTTGCCGAGGT GCCGACCAGGGT ACTCGG GCTCTGGTTGGC TTTTTGCTTTTGGCG Pnap_2255 2407365 - 2407141 - | hypothetical protein TERM 2937 2407389 - 2407415 + r 71 -9.5 -3.53012 | overlap 2407367 2407367 GCTAGCTGCGAGCGC GTCCGGTTTCT AGGGG ATAAACCGGAC TTTCAAACCGAGGGC Pnap_2256 2407771 - 2407418 - | hypothetical protein Pnap_2257 2409948 - 2407771 - | phage terminase GpA TERM 2938 2409021 - 2408977 - G 83 -6.5 -4.86731 | overlap 2408978 2408979 CTCGTTCAAATAAAA GCCCGGCACCGTGCTG--TCGGC CGT GGCGATCCAGC-CGGCGCCGG-C AGATTCGGCCCGGCG Pnap_2258 2410454 - 2409948 - | hypothetical protein Pnap_2259 2411361 - 2410582 - | hypothetical protein Pnap_2260 2412200 - 2411367 - | hypothetical protein Pnap_2261 2412550 - 2412209 - | hypothetical protein Pnap_2262 2413163 - 2412633 - | hypothetical protein Pnap_2263 2413196 - 2413450 + | hypothetical protein TERM 2939 2413523 - 2413509 - T 70 -7 -4.1822 | opp_overlap 2413510, overlap 2413510 GCGCAGTGCAACAAA GGCGGG CAG CCCGCT CCGCTACATTGAAGG TERM 2940 2413909 - 2413919 + T 78 -6.8 -4.67038 | TTGCTGATCGCCGAC CGCT TCA AGCG TTTTAGTTTTCGGGC Pnap_2264 2414508 - 2413945 - | hypothetical protein TERM 2941 2414519 - 2414552 + H 76 -11.9 -3.01188 | opp_overlap 2414515 2414520 2414526, overlap 2414526 TCCATGCCAAATCAT ACCAAAAGGTATTGG CAAA TCAATACCTTTTGGA TATATACCTTTTAGT TERM 2942 2414551 - 2414520 - H 91 -14.7 -3.01497 | opp_overlap 2414519 2414526, overlap 2414515 2414526 CCATGCCAAATCATA CCAAAAGGTATTG GCAAAT CAATACCTTTTGG ATATATACCTTTTAG TERM 2943 2414526 - 2414545 + H 77 -7.2 -4.26188 | opp_overlap 2414520 2414515 2414526, overlap 2414519 CAAATCATACCAAAA GGTATTGG CAAA TCAATACC TTTTGGATATATACC TERM 2944 2414545 - 2414526 - H 75 -6.5 -4.40894 | opp_overlap 2414526 2414519, overlap 2414520 2414515 CAAATCATACCAAAA GGTATTG GCAAAT CAATACC TTTTGGATATATACC Pnap_2265 2414590 - 2415114 + | hypothetical protein Pnap_2266 2415186 - 2415707 + | hypothetical protein Pnap_2267 2415752 - 2416297 + | hypothetical protein TERM 2945 2416416 - 2416431 + F 100 -7.5 -5.92337 | CACTTGCATCCCTCC CCGCC CCATGA GGCGG TTTTTTTTCGTCTGT Pnap_2268 2416574 - 2416837 + | hypothetical protein TERM 2946 2417239 - 2417202 - g 88 -7.6 -4.91109 | overlap 2417205 2417223 CTTTTATGACAAAAA GGACGAGGCACGGCTG ATCAAG CAGCGGCGCCTGGTGC CTGAAAGCCACCAGG Pnap_2269 2416834 - 2417316 + | hypothetical protein Pnap_2270 2417313 - 2417594 + | hypothetical protein Pnap_2271 2417591 - 2417752 + | hypothetical protein Pnap_2272 2417764 - 2418123 + | hypothetical protein Pnap_2273 2418120 - 2418347 + | hypothetical protein Pnap_2274 2418344 - 2419057 + | hypothetical protein TERM 2947 2419917 - 2419896 - g 83 -6.5 -4.82901 | opp_overlap 2419899, overlap 2419899 GGTGGGCGAGAAAAA CCAGGCCAA GGCG CTGGCCTTG ATGCTGGAGCCCGGC TERM 2948 2420373 - 2420350 - g 84 -11 -4.17958 | gap 1, overlap 2420339 2420354 AAGAGCGCCAACAAA GGC-ACGGCCG GGC CGGCCGTCACC ACCCTGACGATCCAG Pnap_2275 2419102 - 2420919 + | parB-like partition proteins Pnap_2276 2420916 - 2421284 + | hypothetical protein Pnap_2277 2421392 - 2421943 + | hypothetical protein Pnap_2278 2422170 - 2422901 + | hypothetical protein TERM 2949 2423141 - 2423163 + F 87 -8.5 -4.58395 | gap 1 GCATTCGATACCCCC GGACGAGTCG CAAG CGACT-GTCC TTTTTAAAAAGTAAA Pnap_2279 2423183 - 2423695 + | hypothetical protein Pnap_2280 2424001 - 2424351 + | hypothetical protein Pnap_2281 2424348 - 2424821 + | hypothetical protein Pnap_2282 2424818 - 2425156 + | hypothetical protein TERM 2950 2425316 - 2425300 - f 85 -4.4 -5.15969 | GCCGAATGCAAAAAA TGGCTC AAGGA GAACCA AGTATGTCAATCTGG TERM 2951 2425481 - 2425437 - g 77 -13.7 -3.31322 | GCCAAGCGCCTAGAA GCCGA-ACTGCGCGGCGCGCT GATCA AG-GCGCCGCGCAGCGTCAAC ATTCCGGGCGACCCG Pnap_2283 2425320 - 2426315 + | phage integrase family protein TERM 2952 2426355 - 2426386 + T 74 -8 -3.95584 | opp_overlap 2426359, overlap 2426359 TACACCGGAAATAAA AAAAGGACTTGGCG CATT CGCTAAGTCCTTGA TTTCATTGGTGGGCG TERM 2953 2426359 - 2426382 + T 89 -13.2 -3.62539 | opp_overlap 2426359, overlap 2426355 CCGGAAATAAAAAAA GGACTTGGCG CATT CGCTAAGTCC TTGATTTCATTGGTG TERM 2954 2426382 - 2426359 - T 100 -11 -5.95539 | opp_overlap 2426355 2426359 CCGGAAATAAAAAAA GGACTTGGCG CATT CGCTAAGTCC TTGATTTCATTGGTG TERM 2955 2426457 - 2426478 + T 71 -5.8 -4.31766 | GTGCTCTACCCCTGA GCTAACCG CCCTAT CGGTCAGC TTTCTATTATATGCT Pnap_2284 2427221 - 2426499 - | DNA polymerase III, epsilon subunit Pnap_2285 2427586 - 2427248 - | ferredoxin, 2Fe-2S type, ISC system TERM 2956 2427336 - 2427321 - G 71 -6.1 -4.36914 | opp_overlap 2427320 GTCTGCGCCAGAAAA GCCTG GCAGCT CAGGC GTGAATTGGGCTCCA hscA 2429488 - 2427626 - | chaperone protein HscA TERM 2957 2428225 - 2428278 + g 85 -14.8 -3.64703 | gap 3 AATCCTGCGCCATCG CCGTGGGAATGGTCTGGTTGCGCGGCA CGA TGC-GCTCAACCAGGCCA--CCCATGG TTTCAATGCCGAGCG TERM 2958 2428383 - 2428363 - G 85 -14.7 -3.54424 | opp_overlap 2428378 GCTGATTGGCCGAAA TGGCGGCGC CCA GCGCCACCA CCTCGTCGGGGTTGA Pnap_2287 2430038 - 2429520 - | co-chaperone Hsc20 TERM 2959 2430078 - 2430054 - R 100 -7 -6.36459 | GGGAATAAAAAAAAA CCGCCAGCAC AGTCA GTGAAGGCGG CAATGAAAAAAGTGC TERM 2960 2430108 - 2430090 - R 78 -2.4 -5.26875 | gap 1, opp_overlap 2430105, overlap 2430091 2430092 GCGGCAATGAAAAAA GTGCGCA CCGTGT TGCGC-C ATGCAAAGCATCGCC Pnap_2288 2430459 - 2430136 - | iron-sulfur cluster assembly protein IscA Pnap_2289 2430897 - 2430496 - | scaffold protein TERM 2961 2430868 - 2430879 + g 80 -5.8 -4.72846 | GCGGGGATTTTCATA GTGG TCCA CCAC TTTTTCGCTGTATGC Pnap_2290 2432182 - 2430965 - | cysteine desulfurase IscS TERM 2962 2431284 - 2431294 + g 74 -4.6 -4.59773 | overlap 2431282 CTCATGTTCAGGTTG TGCG GCA CGCG TTTTTCGGCATCGCC TERM 2963 2431362 - 2431379 + g 80 -5.5 -4.72497 | opp_overlap 2431365, overlap 2431348 2431365 AGCATGCGCTCATGC AAAGCGC GGAT GCGCTTG TTTTCTTCATGCATC TERM 2964 2431365 - 2431376 + g 81 -7.2 -4.46587 | opp_overlap 2431365, overlap 2431348 2431362 ATGCGCTCATGCAAA GCGC GGAT GCGC TTGTTTTCTTCATGC TERM 2965 2431554 - 2431536 - G 81 -10.3 -4.12532 | opp_overlap 2431534 CGGCGCACATACAAA GCCCCAA TGCCT TTGGGGC CGTAGGTTTTGTGCG TERM 2966 2431611 - 2431587 - G 88 -14.3 -3.73775 | GTCAGGCTCATCAAA TCGACCGGCAG CGT CTGCAGGTCGA TATCGACCCGTCCGG TERM 2967 2431682 - 2431654 - G 75 -3.7 -4.72986 | opp_overlap 2431637, overlap 2431658 CATCGGTATGAAAAA TGATGCCCTTTTC GCG GCACAGGGCGCCA ATGGCAGGAATGTCC Pnap_2291 2432792 - 2432256 - | BadM/Rrf2 family transcriptional regulator Pnap_2292 2433054 - 2432803 - | hypothetical protein TERM 2968 2433040 - 2433078 + g 77 -13 -3.55444 | opp_overlap 2433042, overlap 2433041 CAGCCACCTGAAAAA AAGGGACAGCAGCAACGG CTC CCGCTGCGGCTGTCCCCG TTTGCCGCATCAGGC TERM 2969 2433041 - 2433077 + g 81 -16.5 -2.73124 | opp_overlap 2433042, overlap 2433040 AGCCACCTGAAAAAA AGGGACAGCAGCAACGG CTC CCGCTGCGGCTGTCCCC GTTTGCCGCATCAGG TERM 2970 2433076 - 2433042 - G 100 -22.2 -5.44119 | opp_overlap 2433041 2433040 GCCACCTGAAAAAAA GGGACAGCAGCAACGG CTC CCGCTGCGGCTGTCCC CGTTTGCCGCATCAG Pnap_2293 2434104 - 2433142 - | hypothetical protein Pnap_2294 2434363 - 2434112 - | hypothetical protein TERM 2971 2434526 - 2434548 + H 91 -7.6 -5.11063 | overlap 2434527 GGCCATCCTGGTGCA TGCCGCAGAC CAG GTCTGCAGCC TTTTTCTTCACTCAT TERM 2972 2434527 - 2434547 + H 79 -11.1 -3.65554 | overlap 2434526 GCCATCCTGGTGCAT GCCGCAGAC CAG GTCTGCAGC CTTTTTCTTCACTCA Pnap_2295 2434578 - 2435495 + | hypothetical protein TERM 2973 2435530 - 2435557 + T 100 -14.3 -4.3255 | opp_overlap 2435535, overlap 2435535 GAGCCGCCCTGAGCA GAAAAGGCACC CCTCCA GGTGCCTTTTC TTTATTCGTTGGCGC TERM 2974 2435552 - 2435535 - T 85 -9.1 -4.46212 | opp_overlap 2435530 2435535 GCCCTGAGCAGAAAA GGCACCC CTCC AGGTGCC TTTTCTTTATTCGTT TERM 2975 2435535 - 2435552 + T 95 -8.4 -5.13527 | opp_overlap 2435535, overlap 2435530 GCCCTGAGCAGAAAA GGCACC CCTCCA GGTGCC TTTTCTTTATTCGTT Pnap_2296 2436269 - 2435604 - | DSBA oxidoreductase TERM 2976 2435958 - 2436012 + g 70 -7.6 -4.08216 | gap 1 ATCGAAGGTGTTGTA GATGCGGCTGCGCCCGCCGCCGGGC TGGTCC GCCCGGCTGAAGGCAAAGCC-CACC TTTTCACCGCGCTGC Pnap_2297 2436399 - 2437757 + | beta-lactamase domain-containing protein Pnap_2298 2438265 - 2437771 - | UspA domain-containing protein TERM 2977 2438247 - 2438280 + g 75 -4 -4.75309 | TGGGCATGGAGGGCT CCTGGGT-TGAAGAAG GCAT CTT-TTCGCACCCGGG TTTTATTGCATTTGC TERM 2978 2439084 - 2439120 + G 77 -15.8 -2.62184 | gap 1 GTGGGCGCCCTGGTT CCG-GCGGCCCTGGCGG CCAC CCGCAAGGGCGGCACGG TGGTCTGCGCAGGCA TERM 2979 2439199 - 2439233 + G 86 -8.6 -4.60889 | gap 1, overlap 2439202 AGCGTGTCCTGAAGT CG-GTCGCCAACCTC ACGCGC GAGGATGGCGATGCG TTTTTCAGCCTGCTT Pnap_2299 2438358 - 2439362 + | alcohol dehydrogenase Pnap_2300 2439538 - 2440191 + | transport-associated Pnap_2301 2440243 - 2440671 + | heat shock protein Hsp20 TERM 2980 2440730 - 2440695 - g 76 -15.5 -2.53581 | gap 1 CACATGGCCAATCCA GATGCGCAGCCGCCGG GCGCT CCGGTG-CTGCGCATC CGCTCGCTGTGCAAG Pnap_2302 2440683 - 2441414 + | ABC transporter related TERM 2981 2442249 - 2442261 + G 78 -4.7 -4.76041 | overlap 2442228 GCCGTCCATCTTCCT GGCGG TGG CGGCC TTTTTGCTGCATGTG TERM 2982 2442920 - 2442941 + G 76 -7.2 -4.36914 | TGCTGCAGGTCGAGC CGGGCCGC AGCGTG GCGGTTCG TTTTGTGCACGGCCC TERM 2983 2443510 - 2443452 - g 71 -9.6 -3.78934 | gap 4, overlap 2443449 2443453 CGTGGTCTACAACAA TGCCC-GCATCGCGCTGGCCGAGCGCAGCT GGG AGCTG-GC-CAGCCTGCGGG-TGCTGGGCT TCACCCGCGCCGAGG TERM 2984 2443509 - 2443453 - g 70 -13.1 -2.87146 | gap 4, overlap 2443449 2443452 GTGGTCTACAACAAT GCCC-GCATCGCGCTGGCCGAGCGCAGCT GGG AGCTG-GC-CAGCCTGCGGG-TGCTGGGC TTCACCCGCGCCGAG TERM 2985 2443615 - 2443641 + G 91 -6.6 -5.28942 | gap 1 GCGCTGACGCACACG CTGGT-CGGGC TGATGC GCTCGGACCAG TTTTTGTTTCCGGTG Pnap_2303 2441419 - 2443785 + | hypothetical protein TERM 2986 2444401 - 2444375 - g 73 -10.7 -3.55761 | CAGCCAGCGCCCAAA GCGGCCGCCCG TTCGC CGTGCGGTCGC CGGTCAGCGGCCGGG TERM 2987 2444522 - 2444500 - g 75 -13.5 -3.05384 | CCCGCGCGCATGGAA GTGGTCAGC GAGTT GCTGACCAC CGATGCGGTGAAGGC Pnap_2304 2443789 - 2444979 + | RND family efflux transporter MFP subunit Pnap_2305 2445954 - 2445028 - | UspA domain-containing protein TERM 2988 2445495 - 2445479 - G 90 -13.7 -4.07568 | GCGTTCGCGGCAAAA TCCGGCG GCA CGCCGGA CGATGACGCACTGAA Pnap_2306 2446087 - 2446554 + | UspA domain-containing protein TERM 2989 2446557 - 2446567 + F 70 -6.8 -4.12942 | overlap 2446565 CCCGGCGGCTTGACA CGCT TTC AGCG TTTTCAGCGCTTTCA Pnap_2307 2446657 - 2447400 + | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 2990 2447471 - 2447485 + F 70 -5 -4.44974 | overlap 2447441 2447438 2447470 AGCCGGGCCTGCAGC CATCAT TTC ATGGTG TTTTATGCCGTTTGC TERM 2991 2447755 - 2447740 - g 91 -3.2 -5.40072 | GCTGGTGGAAAAAAA GCGC TGGATGAC GCGC GAGGAGTTCATTGAA TERM 2992 2448047 - 2448067 + G 70 -10.4 -3.55071 | gap 1, opp_overlap 2448040, overlap 2448060 2448061 CTGAACAACGTGCTC GGCCTGCGC CTGT GCGC-GGCC TTTGGCGCGCTGTGC Pnap_2308 2447606 - 2448181 + | chromate transporter Pnap_2309 2448178 - 2448762 + | chromate transporter TERM 2993 2449070 - 2449044 - g 71 -8.7 -3.96327 | gap 1 ACCGTCGATGAGAAA TGC-GCCATCGC CTGC GCGCTGGCCGCA GCCGGCGTGCCGGAA TERM 2994 2449798 - 2449783 - g 74 -4.6 -4.63218 | opp_overlap 2449790, overlap 2449786 TGGCCTTCAACAAAA GCATCG TCGG CGAGGC GGTGTTCACCCACGA Pnap_2310 2448960 - 2450147 + | homocitrate synthase TERM 2995 2450172 - 2450162 - g 72 -2.4 -4.69027 | overlap 2450164 AAACCTACTCAAAAA TCCG TGC CGGC CACCGCGCTCAAAGA TERM 2996 2450421 - 2450440 + G 78 -4.8 -4.72272 | TGGACATCCATCCGG GCGCCAGC ATCG GCATGCGC TTTTTCATCGACCAC Pnap_2311 2450144 - 2450941 + | serine O-acetyltransferase Pnap_2312 2450947 - 2451288 + | nitrogen fixation protein NifW Pnap_2313 2451308 - 2452156 + | electron transfer flavoprotein beta-subunit Pnap_2314 2452153 - 2453268 + | electron transfer flavoprotein beta-subunit Pnap_2315 2453296 - 2454606 + | electron-transferring-flavoprotein dehydrogenase TERM 2997 2454712 - 2454734 + G 78 -9.8 -4.03234 | opp_overlap 2454710 2454713, overlap 2454713 ACATCTGCACCAACG AGTGCGGCTC CAA GAGCTGCACC TTTGTCTGCCCGGCG TERM 2998 2454713 - 2454733 + G 71 -13.3 -3.01726 | opp_overlap 2454713 2454710, overlap 2454712 CATCTGCACCAACGA GTGCGGCTC CAA GAGCTGCAC CTTTGTCTGCCCGGC Pnap_2316 2454603 - 2454902 + | putative ferredoxin like protein; FixX Pnap_2317 2454922 - 2455245 + | ferredoxin, 2Fe-2S Pnap_2318 2455242 - 2455721 + | tetratricopeptide TPR_2 Pnap_2319 2456369 - 2455767 - | NifQ family protein Pnap_2320 2456690 - 2456382 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pnap_2321 2456911 - 2456711 - | hypothetical protein Pnap_2322 2457426 - 2456914 - | hypothetical protein Pnap_2323 2457833 - 2457423 - | nitrogen fixation protein NifX Pnap_2324 2459269 - 2457854 - | nitrogenase molybdenum-iron cofactor biosynthesis protein NifN TERM 2999 2457939 - 2457906 - G 83 -15.9 -3.14132 | GGGGTGCCGCAGCAA CCGGCGCCAGCGCTG GGCG CAGCGGCGGCGGCGG CCTCGGGCGTCAGCG TERM 3000 2458102 - 2458086 - G 72 -7.9 -4.21827 | opp_overlap 2458086 2458085, overlap 2458076 TCAAACACCGGAAAA CCGATGC GCA GCAGCGG CTTGTTCAGCCGTTC TERM 3001 2459218 - 2459242 + g 84 -4.2 -5.15969 | CCAGCGGCTGGCTCA TCTTGAGCGG GTTGA CCGTGCAGGA TTTTTTCGATTCGAC Pnap_2325 2460805 - 2459297 - | nitrogenase MoFe cofactor biosynthesis protein NifE TERM 3002 2461513 - 2461483 - g 78 -5.4 -4.72986 | gap 1, overlap 2461485 GATGCCTATGAAAAA CGCCGTGCAG-CG AAGGAG CGACTGCACGAGG AACAAGCGCGATTCA TERM 3003 2461668 - 2461640 - g 72 -7.3 -4.14243 | TATCCCAGGTCAAAA CGGCTTATCGGCG GCT CGCCCAGAAGGCG CATCCCGACGTCGGT Pnap_2326 2461213 - 2461749 + | heat shock protein DnaJ domain-containing protein TERM 3004 2462026 - 2462011 - T 72 -3.9 -4.82901 | TTCCGGCCATAAAAA CGCCC ACAGAA GGACG AGTGGTTGCCGTATC TERM 3005 2462284 - 2462269 - T 70 -5.4 -4.41047 | gap 1, opp_overlap 2462269 2462267, overlap 2462239 2462255 AGCTCTTAACGAAAA GCAGCCG GTT CGG-TGC TGTTTCAATTTCGAA Pnap_2328 2463673 - 2462771 - | H+-transporting two-sector ATPase, gamma subunit TERM 3006 2462927 - 2462942 + g 81 -10.4 -4.18197 | overlap 2462934 GGCACGCTGCATCGC CGCCAG GCGG CTGGCG TTTTCGCTGGCCAGT Pnap_2329 2465232 - 2463670 - | F0F1 ATP synthase subunit alpha TERM 3007 2463902 - 2463883 - G 85 -5.7 -5.0133 | gap 1 CACGCCGTCAAAAAA TGC-GGCG GTCAG CGCCAGCA GCACGGTGATTTGCC Pnap_2330 2466044 - 2465229 - | H+-transporting two-sector ATPase, B/B' subunit TERM 3008 2465827 - 2465847 + g 77 -2.5 -5.08824 | gap 1, overlap 2465828 2465830 GCCAGCATCTCGCTG TGCTGGCG ATCAAA CGCC-GCG TTTTTTGCCTGGAAC Pnap_2331 2466329 - 2466048 - | F0F1 ATP synthase subunit C Pnap_2332 2467081 - 2466371 - | F0F1 ATP synthase subunit A TERM 3009 2466571 - 2466526 - G 72 -3.9 -4.63527 | gap 1, opp_overlap 2466556, overlap 2466530 TGACGACCGGAAAAA TGAAGGGCG-TGATGCTCAGCA AAA TGCCGATGATCATCGCCCCGCT CATCATGTTGCCAAA TERM 3010 2466567 - 2466530 - G 74 -9.9 -3.81926 | gap 1, opp_overlap 2466556, overlap 2466526 GACCGGAAAAATGAA GGGCG-TGATGCTCAGCA AAA TGCCGATGATCATCGCCC CGCTCATCATGTTGC Pnap_2333 2467391 - 2467071 - | hypothetical protein TERM 3011 2467181 - 2467165 - G 81 -7.2 -4.46212 | CGGGCCATGACAAAA CCGGCC AGGCA GGCCAG CAAGCGCCGCCAGTC TERM 3012 2467344 - 2467328 - G 80 -5 -4.86731 | opp_overlap 2467340, overlap 2467313 2467329 GGCCGCCAAAGAAAA TGGCGC CGAGC GCGCCG CCCGCGATGCAGGCC Pnap_2334 2467713 - 2467378 - | F0F1-ATPase subunit, putative TERM 3013 2467734 - 2467722 - R 80 -9.1 -4.11692 | CAGTCATGCTGAAAA GTCGC GAA GCGAC GCAAAAACCCGGTTT Pnap_2335 2468101 - 2467706 - | F0F1 ATP synthase subunit epsilon TERM 3014 2467753 - 2467742 - G 73 -3.6 -4.68424 | GAAGCGACGCAAAAA CCCG GTTT CGAG TTTGGCCATGACCGC Pnap_2336 2469509 - 2468085 - | F0F1 ATP synthase subunit beta TERM 3015 2468300 - 2468274 - G 76 -5.7 -4.56597 | overlap 2468289 CTCGGTCGTGAAAAA CGGCTGGGTCA GGAAG CGCTCCAGCCG GCGCGCGCGGCCGAC Pnap_2337 2470259 - 2469780 - | hypothetical protein Pnap_2338 2472009 - 2470294 - | ATPase central domain-containing protein TERM 3016 2471799 - 2471847 + g 70 -12.3 -3.14344 | gap 1 CACCCTGCAGCGCCT GGCGCAGCGAGCCGAGCTGCGC GGCCCG GCGCTGCT-GGCTGGCGCCGCC TTCCTGCCAGAGCTG Pnap_2339 2472520 - 2472032 - | hypothetical protein Pnap_2340 2472808 - 2472569 - | hypothetical protein Pnap_2341 2473153 - 2472836 - | hypothetical protein Pnap_2342 2473503 - 2473156 - | ferredoxin TERM 3017 2473268 - 2473286 + g 91 -3 -5.46698 | TGGGCGGTGATCTTG CCGGCC AGCTTGA GGACGG TTTTTTCCTTTTGCG TERM 3018 2473582 - 2473553 - R 100 -20.8 -3.57561 | CGGTAAGCGGCGAAA TGCAGGGCCGGG GGCGAA CCCGGCCCTGCA GGCACATCAACGGAT Pnap_2343 2475148 - 2473589 - | nitrogenase molybdenum-iron protein beta chain TERM 3019 2474622 - 2474632 + g 83 -6.8 -4.90869 | ACGTCGAAGTCGTCG GGCA CGC TGCC TTTTTGCTTGCTGGT TERM 3020 2475238 - 2475213 - R 89 -13.9 -3.54424 | opp_overlap 2475227 GGTCATCGTGGGAAA GGGCGGCCGGC GGTC ACCGGCCGTCC GGGGTCTTAAGCGGC Pnap_2344 2476708 - 2475245 - | nitrogenase molybdenum-iron protein alpha chain TERM 3021 2476154 - 2476199 + g 72 -3.9 -4.56775 | gap 1, overlap 2476157 2476159 GCCACGAAAACCTTC GCAGCGCACGGGA-ACGATGGT CTT GCCAACGTATTCCTTGCTCTTC TTTTTCGACACGGCT TERM 3022 2476786 - 2476749 - R 100 -17.1 -3.28712 | gap 1, opp_overlap 2476751 TTTTCTCTGGCACAA GACCAGCCCGGTTCATCC TGC GG-TGAACCCGGCCGGTC TTAAAGCCTCTTAGG TERM 3023 2476751 - 2476784 + r 81 -13.1 -3.04248 | opp_overlap 2476749 TTCTCTGGCACAAGA CCAGCCCGGTTCATC CTGC GGTGAACCCGGCCGG TCTTAAAGCCTCTTA nifH 2477687 - 2476797 - | nitrogenase reductase TERM 3024 2477982 - 2478002 + H 100 -14.7 -4.07562 | opp_overlap 2477977 2477976, overlap 2477983 2477987 CGCAAAAATTCCGCC TCCGGCCTG CCG CAGGCCGGG TTTGTGTCGGGTTTG TERM 3025 2477983 - 2478001 + H 93 -16 -3.03814 | opp_overlap 2477977 2477976, overlap 2477982 2477987 GCAAAAATTCCGCCT CCGGCCTG CCG CAGGCCGG GTTTGTGTCGGGTTT Pnap_2346 2478071 - 2478499 + | globin Pnap_2347 2478554 - 2479162 + | hypothetical protein Pnap_2348 2479183 - 2479632 + | ankyrin Pnap_2349 2479626 - 2481320 + | hypothetical protein Pnap_2350 2481317 - 2482084 + | ankyrin TERM 3026 2482179 - 2482152 - g 100 -9.8 -4.87893 | gap 1 AATGCCAAGCAAAAA GCGCTGCTGCGCG CCG CGCGCCACA-CGC TGGATGCGCGCGACC Pnap_2351 2482095 - 2482523 + | nitrogenase-associated protein Pnap_2352 2482538 - 2482789 + | FmdB family regulatory protein TERM 3027 2483021 - 2482988 - g 93 -13.9 -4.13014 | gap 1, opp_overlap 2482995, overlap 2482989 GCCACATCGCCAAAA CCGACA-AGCTGCCGC TGC GCGGCTGCTATGTCGA GGCGGTGCTGTCGAT TERM 3028 2483020 - 2482989 - g 81 -15.2 -3.07487 | gap 1, opp_overlap 2482995, overlap 2482988 CCACATCGCCAAAAC CGACA-AGCTGCCGC TGC GCGGCTGCTATGTCG AGGCGGTGCTGTCGA Pnap_2353 2482789 - 2483226 + | OsmC family protein Pnap_2354 2483223 - 2483468 + | hypothetical protein TERM 3029 2483511 - 2483489 - T 74 -4.6 -4.82901 | opp_overlap 2483490, overlap 2483491 CGCCCGGCAGAAAAA CCTCCTGGCG GCT CGCCGGCCGG GACTGAATTTGCTAT TERM 3030 2483536 - 2483570 + T 85 -4.2 -5.28176 | opp_overlap 2483537, overlap 2483522 2483537 TGCTATTTTTTTAAT AGCTGTCTGCGCAT ATACAGC ATGCGCAAACTGCC TTTTTTATCCATAAA TERM 3031 2483626 - 2483595 - T 77 -11.6 -3.60074 | gap 1, overlap 2483587 2483609 CATAAATGCCTGAAA GCGAGCCGCAGAAAG CCG CCTTCAGCG-CTCGC CATCCCCGTCCACGT Pnap_2355 2483831 - 2483616 - | hypothetical protein Pnap_2356 2484415 - 2483828 - | RNA polymerase sigma factor TERM 3032 2484055 - 2484041 - G 78 -2.8 -5.07053 | opp_overlap 2484041 AAGCACGGCAAAAAA CTGG CGGCTGC CCAG TTCCTGCTCGGGGTT Pnap_2357 2484477 - 2484995 + | redoxin domain-containing protein TERM 3033 2485082 - 2485063 - f 83 -10 -4.12902 | opp_overlap 2485051 2485080 TAACCAGCCTGAAAA GTGTCCCG CTTG CGGAACAC CGGCCAGACTGGTGT TERM 3034 2485080 - 2485096 + F 84 -5.8 -5.09426 | opp_overlap 2485063, overlap 2485051 GTCCCGCTTGCGGAA CACCGG CCAGA CTGGTG TTTTTTACCCTTCCA TERM 3035 2485265 - 2485245 - g 75 -3.1 -4.86621 | overlap 2485246 ATGGCCAAGGAAAAA TGCTTCGGC ATT GCCAAGGCC GGCCAGAACGACTGC TERM 3036 2485415 - 2485377 - g 71 -8.9 -3.86897 | GGCAGCTGCGAGAAA GTCGGCGG-ATTGAGCCTG GAC CAGG-TCAAGGCCGCCGCC AAGAAAGGCTGAAGA Pnap_2358 2485143 - 2485427 + | putative signal peptide protein Pnap_2359 2485433 - 2486368 + | hypothetical protein Pnap_2360 2486365 - 2487150 + | hypothetical protein TERM 3037 2487262 - 2487284 + G 73 -3.3 -4.8048 | gap 1, overlap 2487245 2487261 TGCTCGCCCTGCTGG CG-CGCGGCT ATGT GGCCGAGGCG TTTTTCCTGTCCGGC TERM 3038 2487549 - 2487567 + G 78 -6.6 -4.56597 | overlap 2487555 ATCACCTGGGGCGTT CTGCTGGC CAT GCTGGCGG TTTTTGGCAGCGGCA Pnap_2361 2487168 - 2487650 + | DoxX family protein Pnap_2362 2488543 - 2487776 - | ABC transporter related Pnap_2363 2489586 - 2488567 - | transport system permease protein TERM 3039 2489110 - 2489074 - G 73 -12.9 -3.21099 | overlap 2489077 GGGCGTGAGCAGCAA CACCAGCGAGGTGATGG CGC CCAGCACCACGCCGACG ATCACGCCGGCCAGC TERM 3040 2489227 - 2489200 - G 83 -12.7 -3.86015 | gap 1 CACGGCGCCGACAAA GGC-CGCGCCGG TCAGC CCGACGCGCGCC AGCCAGTGCGTGGCC TERM 3041 2489305 - 2489260 - G 71 -9 -3.71649 | gap 3, overlap 2489253 2489291 CGGCGAAACGCCAAA CAGCGCCATCGCCGCAGCCACGC CCA GCGAAGC-GCC-CGA-GGCGCTG CCGAGCAAATACGGG Pnap_2364 2490449 - 2489583 - | periplasmic binding protein Pnap_2365 2491039 - 2490446 - | cobalbumin biosynthesis enzyme TERM 3042 2490570 - 2490554 - G 79 -10.8 -3.92373 | overlap 2490555 GAGCGCATCGACAAA GGCGCG CGTCT CGCGCC CAAGCGGAATCACGC TERM 3043 2490598 - 2490629 + g 73 -7.1 -4.31085 | opp_overlap 2490583 CGCCCAGGCCGATCT CGTTGCCGACCAG CACGAC CGGGCCGGCGGCG TTTTCGATTGCTATC TERM 3044 2490968 - 2490984 + g 76 -7.2 -4.36914 | CGCCAGCAACTCGGC GCGGCG CGACT TGCCGC TTTTCTGGCCGCCCA Pnap_2366 2491883 - 2491032 - | periplasmic binding protein TERM 3045 2491920 - 2491900 - R 71 -4.6 -4.56597 | gap 1, overlap 2491902 GTCTTCCTTCAAAAA CAGGC-GCG CCGC CGCAGCCGG GCTGGACGCGAACCA Pnap_2367 2493210 - 2491876 - | cobyrinic acid a,c-diamide synthase TERM 3046 2491912 - 2491902 - G 71 -8.2 -3.90048 | overlap 2491900 CTTCCTTCAAAAACA GGCG CGC CGCC GCAGCCGGGCTGGAC Pnap_2368 2495066 - 2493213 - | TonB-dependent receptor, plug TERM 3047 2493487 - 2493503 + g 77 -13.7 -3.35639 | opp_overlap 2493473 AGCAGGCCGTGCTGC CTGGCGC GGC GCGCCAG TTGCTTGCCGGTATT TERM 3048 2494949 - 2494960 + g 74 -5.8 -4.50159 | overlap 2494903 2494902 GGGCGCTGCGGGTGG CCGT GACG ACGG TTTCTTTGAGTTGCG TERM 3049 2495278 - 2495264 - H 74 -11.4 -3.21705 | opp_overlap 2495260 2495259 2495255 2495276, overlap 2495259 2495254 GACAACTGAATGCAA CCCTGG ATT CCAGGG CGCTGCATTCGTCCG Pnap_2369 2495476 - 2495724 + | hypothetical protein Pnap_2370 2495721 - 2496053 + | hypothetical protein TERM 3050 2496791 - 2496758 - g 74 -2.3 -4.82901 | gap 1, opp_overlap 2496783, overlap 2496765 2496778 2496779 GTTCCTCGATAAAAA GCCCAAACCGACGC GCCAAAT GC-CCGGCACGGGC GGCCAACTGGCTGCC Pnap_2371 2496363 - 2497178 + | hypothetical protein Pnap_2372 2497717 - 2497205 - | ribonuclease activity regulator protein RraA TERM 3051 2498051 - 2498023 - g 83 -5.1 -5.00616 | overlap 2498024 2498039 GTCGCCGCTAAAAAA GTGGCTCCCGCCA AAA CGGCGGCAGCTAA AAAAGCAGCCCCCGC TERM 3052 2498065 - 2498039 - g 76 -9.3 -4.07568 | overlap 2498024 2498023 2498056 2498057 TGGCTCCCGCCAAAA CGGCGGCAGCT AAAAA AGCAGCCCCCG CTACGGCAAAACCGG TERM 3053 2498066 - 2498056 - g 83 -4.6 -5.08824 | overlap 2498039 2498057 GCGGCAGCTAAAAAA GCAG CCC CCGC TACGGCAAAACCGGC TERM 3054 2498310 - 2498287 - g 100 -8 -5.25803 | overlap 2498275 2498289 AATGCCGACAAAAAA CTGCTGGCCG TATT CGGCAAGCCG CAGGTGTCGATGTTT Pnap_2373 2497957 - 2498361 + | SWIB/MDM2 domain-containing protein TERM 3055 2498404 - 2498418 + T 100 -11.4 -5.61596 | opp_overlap 2498402 GCCCCCCATCGAATG GCCGCT TTC AGCGGC TTTTTTTATGCGCAT Pnap_2374 2499395 - 2498541 - | extradiol ring-cleavage dioxygenase III subunit B TERM 3056 2500915 - 2500895 - g 82 -3.1 -5.1861 | overlap 2500896 2500899 TGCAGGAGCAAAAAA CGCACCTGG AAG CCAAGGGTG CAGGCCATTACGGCA TERM 3057 2501314 - 2501290 - g 74 -5.7 -4.43477 | GCCACGGAATCAAAA CCAGCAGCA AAACCCG TGCTGGTGG CGGTAAAAAACACGA Pnap_2375 2499733 - 2501466 + | polyhydroxyalkanoate depolymerase, intracellular Pnap_2376 2501515 - 2502210 + | electron transport complex, RnfABCDGE type, B subunit TERM 3058 2502943 - 2502917 - g 76 -5.8 -4.65895 | overlap 2502918 GCGCCGATGCAAAAA CTCCCCCTGC GGGCCAA GGAGGGGGAA AACGCCGACCTGATC TERM 3059 2503067 - 2503035 - g 91 -5.6 -5.37865 | overlap 2503036 2503037 TCAAGAATGAAAAAA CCG-GCCAGCTCAAGC TGC GCCTGA-CCGACGCGG TGCAATCCTATAACC Pnap_2377 2502203 - 2505577 + | multi-sensor hybrid histidine kinase Pnap_2378 2506117 - 2505629 - | lactoylglutathione lyase TERM 3060 2505797 - 2505767 - G 77 -12.5 -3.65313 | gap 1 GAAGCAGATGTCAAA GCC-GGCGGCCCCC TTGC GGATGCCGCCCGGC GCAAAGCGCACGCCC Pnap_2379 2508162 - 2506114 - | acetyl-CoA carboxylase, biotin carboxylase TERM 3061 2507783 - 2507799 + g 79 -9.3 -4.18488 | GGAATGCAGTTCACA CCGGCCG CAC CGGCCAG TTTCTTCGACTCGAT Pnap_2380 2508973 - 2508212 - | hypothetical protein TERM 3062 2508458 - 2508483 + g 71 -6.1 -4.37092 | CTCATGCGTACTGGT GCTGCGGTCTT CGAC AAGAATGCGGC TTTTATCCAGCCCCT Pnap_2381 2510543 - 2509011 - | carboxyl transferase Pnap_2382 2511597 - 2510593 - | arginine/ornithine transport system ATPase Pnap_2383 2513768 - 2511612 - | methylmalonyl-CoA mutase TERM 3063 2512963 - 2512975 + g 73 -3.3 -4.68994 | overlap 2512964 TCTACGTCCAGACCC TTGCC CAG GGCGG TTTTTACGTACTCCT TERM 3064 2513524 - 2513509 - G 72 -3.9 -4.56597 | overlap 2513510 TCGGCGGTCGAAAAA CCCGC GTACTG GCGGA TCGTCCAGGGGCGCA TERM 3065 2514316 - 2514337 + G 72 -7.3 -4.13945 | TCAACAACCGGGAAC GCTTCTTTG AAGT CAACGAAGC TTTTCACATGCGACT Pnap_2384 2513937 - 2514572 + | GntR family transcriptional regulator Pnap_2385 2516164 - 2514596 - | hypothetical protein TERM 3066 2515871 - 2515887 + g 77 -2.1 -5.08824 | ATAGGCCAGTCCCAT GTGGCCG CGG CGGTAGC TTTTTTCGCTGGCGA Pnap_2386 2517435 - 2516161 - | hypothetical protein Pnap_2387 2519420 - 2517498 - | putative serine protein kinase, PrkA TERM 3067 2517659 - 2517670 + g 82 -3 -5.10933 | GCAACAAGTCTTCAG TGTT CGAG AACA TTTTCTTTTCGATGA TERM 3068 2519096 - 2519112 + g 100 -6.6 -5.7946 | CGCCCACCGGGCCAA GCAGAT AAAGA ATCTGC TTTTTTTCTTCAAGC Pnap_2388 2520623 - 2519610 - | tRNA-dihydrouridine synthase A Pnap_2389 2520806 - 2522605 + | peptidase M14, carboxypeptidase A TERM 3069 2522619 - 2522631 + F 70 -6.9 -4.19276 | overlap 2522628 GAGCGCTCGCAGTGG CCGGT TTT GCCGG TTTTGCCGGTTTTGC TERM 3070 2522628 - 2522640 + F 70 -6.9 -4.19879 | overlap 2522619 CAGTGGCCGGTTTTG CCGGT TTT GCCGG TTTTGCGAATTTTGT Pnap_2390 2522783 - 2523172 + | hypothetical protein Pnap_2391 2524729 - 2523320 - | replicative DNA helicase TERM 3071 2524913 - 2524896 - R 100 -12.7 -5.4505 | opp_overlap 2524896 TTTCCCAAGAAAAAA GCCGCTC CGAA GAGCGGC TTTCAGGTAACGCGG TERM 3072 2524896 - 2524913 + r 85 -12.7 -3.59979 | opp_overlap 2524896 TTTCCCAAGAAAAAA GCCGCTC CGAA GAGCGGC TTTCAGGTAACGCGG Pnap_2392 2525390 - 2524938 - | ribosomal protein L9 TERM 3073 2525156 - 2525178 + g 72 -7.6 -4.11394 | CGGCTTTTTGCGTCA GCTTGACGGT GGT GCCGCCGAGC TTTTCGCCCTGAACT Pnap_2393 2525687 - 2525403 - | ribosomal protein S18 Pnap_2394 2526015 - 2525698 - | putative primosomal replication protein Pnap_2395 2526429 - 2526064 - | ribosomal protein S6 TERM 3074 2526135 - 2526148 + g 81 -3.7 -5.06414 | GCATCATGAGGGACG GGCCG GTTT CAGCC TTTTTCTTGACCACG TERM 3075 2526467 - 2526457 - R 86 -6.8 -5.10461 | opp_overlap 2526456 TGGATGCAATAAAAA GCTG CCC CAGC GTCGTTAAGGGTGCA Pnap_2396 2528681 - 2526501 - | Na+/solute symporter TERM 3076 2526935 - 2526904 - G 85 -5.8 -4.98531 | gap 1, opp_overlap 2526904 2526905, overlap 2526905 2526917 2526926 GCTGCAAATGAAAAA GCGGCCGATA-CCAG AAA CAGGATATCAGCCGG TTTCTGGGCTGCTAC TERM 3077 2527506 - 2527496 - G 81 -2.4 -5.1101 | overlap 2527497 CCATCAGGCAAAAAA CCAG CGC CAGG AAGTTGCGCCGTGAC TERM 3078 2527723 - 2527745 + g 87 -6.2 -5.14563 | overlap 2527724 2527736 TCGGCTACCGACGCA TTGCCAGCCT TCA GGGCTGCCAG TTTTTTGGTGGCAGC TERM 3079 2528623 - 2528587 - G 76 -5.9 -4.6575 | gap 2 ACATAAACGACAAAA CCCAGCGTGAACCAGCG ATAAA CGC-GGTCCA-GTTGGG ACTTGAACTGTTTTT Pnap_2397 2528944 - 2528684 - | hypothetical protein Pnap_2398 2529794 - 2528931 - | TPR repeat-containing protein TERM 3080 2529035 - 2529062 + g 78 -7.1 -4.67234 | gap 2, overlap 2529035 2529036 CCTTGGGTTCGAACT G-GCG-CAGGTGA TCAA TCACCTGGCGCGC TTTTTCGGGTTCACT TERM 3081 2529956 - 2529935 - R 72 -11.5 -3.08679 | opp_overlap 2529951, overlap 2529937 CCTGCCCACTGAAGA CACCGGGGG TTTT CCCTCGGTG AAGCACTGATAACTT Pnap_2399 2532370 - 2529971 - | phosphoenolpyruvate synthase TERM 3082 2530715 - 2530688 - G 91 -9 -4.52589 | opp_overlap 2530692 2530701, overlap 2530689 2530692 CTTGTCCACATAAAA CGCACGCGGCGA CGCA TGGCCGCGCGCC ACGCTTTCAACGGCC TERM 3083 2530714 - 2530689 - G 74 -12.5 -3.31232 | opp_overlap 2530692 2530701, overlap 2530688 2530692 TTGTCCACATAAAAC GCACGCGGCGA CGCA TGGCCGCGCGC CACGCTTTCAACGGC Pnap_2400 2532550 - 2533371 + | hypothetical protein Pnap_2401 2533623 - 2534195 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 3084 2534216 - 2534239 + F 100 -15.2 -5.4505 | TTCGTGCGCGCCACA GCCCGGGCGC GCTT GCACCCGGGC TTTTTTATTCCCCCA Pnap_2402 2534278 - 2535876 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pnap_2403 2536257 - 2535955 - | antibiotic biosynthesis monooxygenase Pnap_2404 2536979 - 2536335 - | glutathione S-transferase domain-containing protein TERM 3085 2537242 - 2537253 + H 100 -5.8 -5.76949 | CCTTCGCCGTACTCG GGCT TGCC AGCC TTTTTTTTCACCATG Pnap_2405 2537271 - 2537618 + | hypothetical protein Pnap_2406 2537615 - 2538601 + | putative poly-gamma-glutamate biosynthesis enzyme TERM 3086 2539445 - 2539465 + G 74 -2.3 -4.82901 | opp_overlap 2539421, overlap 2539441 2539447 ATCCTGGCCTTGCTG CCGGCGCAG CGC CAGAGCCTG TTTTTCTCGGCCACC Pnap_2407 2538902 - 2540155 + | DEAD/DEAH box helicase domain-containing protein TERM 3087 2540183 - 2540156 - f 83 -9.8 -4.17048 | GCCGCCGGAAAATAA GCCAGGCAAGAA AGGA TTCGCGCCCGGC CAGTCAATTTTCAGG TERM 3088 2540442 - 2540457 + G 91 -9 -4.56597 | GCAATGCGCTGTATG CCGATG TGCG CATCGG TTTTTCACCCGACGG TERM 3089 2540677 - 2540653 - g 84 -11.3 -4.19238 | CGTTGAACTTCAAAA CGGCCGCTGGC GCT ACCCGCAGCCG CTGGTGCCGGCAACG TERM 3090 2540715 - 2540729 + G 73 -8.5 -4.07885 | CCTCCAGCGACCTGC GCGCC AATCC GGCGC TTTTCGCCAAGGATC TERM 3091 2540769 - 2540788 + G 70 -10 -3.60296 | gap 1 TGGTGATTTCATCGG CACC-CGGC CAT GCCGAGGTG TTTGCGCTGCGGCTG Pnap_2408 2540291 - 2542936 + | pentapeptide repeat-containing protein TERM 3092 2543558 - 2543534 - g 84 -11.3 -4.19238 | CGTGGAACTTCAAAA CGGCCGCTGGC GCT ACCCGCAGCCG CTGGTGCCCGCCACC TERM 3093 2544639 - 2544661 + G 82 -11.2 -4.10429 | overlap 2544640 GACCTGCCCGGCATC ATGCCCGGCG GCC CGCTGGGCAA TTTTGACGGCTCCTT TERM 3094 2544640 - 2544660 + G 78 -14.7 -3.05775 | overlap 2544639 ACCTGCCCGGCATCA TGCCCGGCG GCC CGCTGGGCA ATTTTGACGGCTCCT Pnap_2409 2543124 - 2545781 + | pentapeptide repeat-containing protein TERM 3095 2547988 - 2547977 - g 76 -5.8 -4.61231 | overlap 2547978 CTACACCTTCAAAAA CCTG CCTT CAGG CGGAAACGTGACGGT Pnap_2410 2545878 - 2549153 + | NHL repeat-containing protein TERM 3096 2549231 - 2549209 - T 100 -17 -5.89947 | TAAACGCAAAAAAAA GGGGGCCTGC GCT GCAGACCCCC TTACAAAATTTTAAA Pnap_2411 2549565 - 2549257 - | hypothetical protein Pnap_2412 2550227 - 2549679 - | DSBA oxidoreductase TERM 3097 2549876 - 2549904 + g 71 -5.1 -4.42238 | overlap 2549877 GTGCAATGTCCAGCC CCACCTGCCGGGC ATA GTCGAGCAGGTGC TTTTCCTTCAGGTGC Pnap_2413 2550396 - 2550608 + | hypothetical protein Pnap_2414 2551019 - 2550642 - | hypothetical protein TERM 3098 2551391 - 2551359 - R 100 -14.2 -4.44355 | opp_overlap 2551364, overlap 2551364 TAACCGTAAAAACAA GAAAACGCGCCCGG CAAAC CCGGACGCGTTTTT GATTTCAAAGGCACA TERM 3099 2551386 - 2551364 - R 100 -14.1 -5.16681 | opp_overlap 2551364, overlap 2551359 GTAAAAACAAGAAAA CGCGCCCGG CAAAC CCGGACGCG TTTTTGATTTCAAAG TERM 3100 2551364 - 2551386 + r 100 -11.9 -4.98531 | opp_overlap 2551359 2551364 GTAAAAACAAGAAAA CGCGCCCGG CAAAC CCGGACGCG TTTTTGATTTCAAAG Pnap_2415 2551666 - 2551442 - | TOBE domain-containing protein Pnap_2416 2552589 - 2551777 - | ABC transporter related TERM 3101 2552559 - 2552569 + g 90 -2.4 -5.42259 | TCTCCAGGCGAACGC CGCG TGC CGCA TTTTTTTCAGGATGA Pnap_2417 2553501 - 2552599 - | binding-protein-dependent transport systems inner membrane component TERM 3102 2553136 - 2553118 - G 83 -7.4 -4.57073 | CAGGGTCTCGAAAAA CTTCACCG ATC CGGTCAAG AGGCCCAGCCCCAGC TERM 3103 2553475 - 2553432 - G 79 -9.2 -4.13767 | opp_overlap 2553437, overlap 2553433 CGCCCCACGGTAAAA GGCCCAGCCCCGGCCCGTCG ATCA CGTCGGGCAGGGGCGTCGTC TGGAGTTCACGCGTT TERM 3104 2553437 - 2553470 + g 77 -15.1 -2.64794 | opp_overlap 2553432 2553433 CACGGTAAAAGGCCC AGCCCCGGCCCGTCG ATCA CGTCGGGCAGGGGCG TCGTCTGGAGTTCAC Pnap_2418 2554686 - 2553523 - | alkanesulfonate monooxygenase Pnap_2419 2555755 - 2554706 - | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein Pnap_2420 2556803 - 2555781 - | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 3105 2556866 - 2556880 + r 77 -8.5 -4.11216 | opp_overlap 2556850 2556855 GCAAGGCGCTGCCTG CCGCC CGCAT GGCGG TTTTCAACATCGGGA Pnap_2421 2557525 - 2556926 - | NADPH-dependent FMN reductase Pnap_2422 2558617 - 2557586 - | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 3106 2557805 - 2557823 + g 82 -5.9 -4.8543 | overlap 2557795 GTCGAGGTAGGCGGC GGCCACG GCGCG CGTGCCC TTTTTATCGACATTC TERM 3107 2558654 - 2558641 - H 78 -6.7 -4.62471 | CCTAATTTCCAAAAA CGCAT CTGA ATGCG AACAAAATGGATTCT TERM 3108 2558719 - 2558694 - H 91 -7.1 -5.26119 | gap 1 CGGTGAAAAACAAAA CGAATAAA-AAC TCA GTTCTTTATTCG GAAAACATCCTTAGA Pnap_2423 2558764 - 2559045 + | hypothetical protein Pnap_2424 2559055 - 2560968 + | hypothetical protein Pnap_2425 2562273 - 2561038 - | extracellular ligand-binding receptor TERM 3109 2561336 - 2561301 - G 74 -4.6 -4.57569 | opp_overlap 2561326, overlap 2561320 TGATGCCGGCAAAAA TCGCCTGCATGGTCGA ATAG CCGACCACCGAGCCGA CCTTGGGGTATTCCT TERM 3110 2563255 - 2563283 + G 70 -7.4 -3.98913 | gap 1 CCGCTCGCTGCTGTC GCTGC-TGCTGGC CTAT GCCGGCATGAAGC TTATTTCCATCTAGC Pnap_2426 2562506 - 2563297 + | hypothetical protein TERM 3111 2564114 - 2564144 + G 70 -11.8 -3.16564 | CGGCGGCATGGGCCG CACGCCGATCATCG GCA CGGTGATCCGCGAG TTCCTGGCGTGGGAC TERM 3112 2564655 - 2564686 + G 73 -8.6 -4.07568 | gap 1 CGCGTCGATGCGCTG CCGGCGCTGTGGCGC GCG GCCACGCAG-GCCGG TTTTGCCAAGGCCAA Pnap_2427 2563389 - 2565197 + | nitrite/sulfite reductase hemoprotein beta subunit Pnap_2428 2565236 - 2565637 + | hypothetical protein Pnap_2429 2565649 - 2566443 + | phosphoadenylyl-sulfate reductase (thioredoxin) TERM 3113 2566886 - 2566926 + G 81 -3.7 -5.00616 | opp_overlap 2566922, overlap 2566912 CGCGCTGATCGGCGG TGCGCGCCGCGACGAGG AAAAAGC CCGCGCCAAGGAGCGCA TTTTTTCGCACCGCG Pnap_2430 2566440 - 2567393 + | sulfate adenylyltransferase subunit 2 TERM 3114 2567950 - 2567932 - g 73 -11 -3.61398 | opp_overlap 2567939, overlap 2567937 GCTGGCCTTCAACAA CATCAGCG CCG CGCTGACG GCCTTTGCCGAAGCG Pnap_2431 2567393 - 2568709 + | sulfate adenylyltransferase, large subunit TERM 3115 2568701 - 2568714 + F 86 -6.7 -5.07107 | TCCGGCGCCGCGCTG GTGCT GTAA AGCAC TTTTTTAAAACTTTC Pnap_2432 2568881 - 2569210 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Pnap_2433 2569288 - 2570388 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Pnap_2434 2570465 - 2571769 + | permease for cytosine/purines, uracil, thiamine, allantoin Pnap_2435 2572610 - 2571753 - | phosphomethylpyrimidine kinase TERM 3116 2571970 - 2572002 + g 80 -6.1 -4.72272 | overlap 2571971 2571972 GTATTGGCCGTGTGG ATGCGCGGCGCAC GCATCCA GTGCGCCGCACCG TTTTTCGTGAGCAGC TERM 3117 2572892 - 2572904 + H 80 -9.1 -4.10007 | CCAGGTAATCCACGG GCAGC ATG GCTGC TTTTGAGCACATTGT Pnap_2436 2573052 - 2574605 + | carbohydrate kinase, YjeF related protein Pnap_2437 2575171 - 2574602 - | protein of unknown function YGGT TERM 3118 2574866 - 2574839 - G 77 -2.6 -5.0538 | gap 1, overlap 2574844 CTTCACGGCAAAAAA CAGCATGGCAAGC ACC GCC-GCCACTCCG AAATCCGCGCCGCCG TERM 3119 2574993 - 2574961 - G 72 -13.5 -2.71011 | opp_overlap 2574963, overlap 2574947 2574963 ATGCTGCTGCAAGCA CACTGGCCCAGTC CACGCGT GACTGGCCCAGTG GCTTGGGCAGGGAGC TERM 3120 2575146 - 2575133 - G 75 -4.5 -4.7871 | AATCAGGATGAAAAA TGCCG TTTC CAGCA AAAAAGCCAAAATCC Pnap_2438 2577372 - 2575213 - | ribonuclease R TERM 3121 2575350 - 2575374 + g 73 -12.7 -3.14132 | AAGGCGCGCTGCGCC CGCTGCGCCGG GAT CCGGCACCGCG TTCCTGCAGCGGCAG TERM 3122 2575786 - 2575833 + g 86 -4.9 -5.15117 | gap 3, opp_overlap 2575797 ACGGCGCTCATTGGC GCTGCAATGCAGGCCGGCT-GCCT GCC AGGCCAGCTGGTCAGCA--GAAGC TTTTTTCGGCTTTTC TERM 3123 2576328 - 2576363 + g 84 -8.2 -4.42386 | gap 1 GCATGGACTCTTCGA TCAGCCGGTGCGCCACG TTG CG-GGTGCGCGGGATGA TTTTCTCGATCCGCC TERM 3124 2577767 - 2577737 - R 95 -11.4 -4.55287 | GCCAGTCATAGAAAA TTTCTGGAAAAAAT TGA ATTTTTTCCAGCAA CGCACCTGATAAGCC TERM 3125 2577917 - 2577936 + r 100 -3.5 -5.75342 | CTCAAGTCGGAAAAA GCTGCTG CTAACA CAGTGGC TTTTTTTTCGCCCGA Pnap_2439 2579429 - 2578044 - | MiaB-like tRNA modifying enzyme YliG Pnap_2440 2579464 - 2581086 + | recombinase TERM 3126 2581100 - 2581068 - f 73 -5.7 -4.40003 | gap 1, overlap 2581070 2581071 GGGCACAAACAGAAA TACGCCCATCACCC CGTGAC AAGTGATGGGC-TA TAAGTCCGCAGACTT TERM 3127 2581615 - 2581648 + G 71 -8.3 -3.91144 | opp_overlap 2581622, overlap 2581616 2581618 GATGCCCAGCGAGGG TCAGCAATATTCACT GCGC AGTAAATATTGCTGC TTTGTCGAATATCGA Pnap_2441 2581460 - 2581774 + | hypothetical protein TERM 3128 2582467 - 2582455 - g 76 -9.1 -4.09685 | opp_overlap 2582455 2582452 CTTGATTTCGCAAAA CGCAG TCC CTGCG TGCTCTTGCTGGATG TERM 3129 2582629 - 2582646 + G 71 -8.3 -3.86916 | overlap 2582630 CCCGAGCTGATTGAT CCGGCGC TGTG GCGCCGA TTTGATCTGGTCGTC Pnap_2442 2581894 - 2583060 + | ATPase central domain-containing protein Pnap_2443 2583057 - 2585276 + | hypothetical protein Pnap_2444 2585330 - 2586121 + | ECF subfamily RNA polymerase sigma-24 factor Pnap_2445 2586118 - 2586711 + | hypothetical protein TERM 3130 2586831 - 2586804 - g 72 -12 -3.31322 | gap 1, opp_overlap 2586801 TGGAACCTGCTAGAA CTCGTC-AGCCGC GAA GCGGCTCGGCGAG ACCTTGATGTGTATG TERM 3131 2587408 - 2587396 - g 71 -9.1 -3.68359 | overlap 2587390 CGGGCAAAACCAGAA CGCTG GTG CAGCG TATCCAGAGTCTTCT TERM 3132 2589446 - 2589461 + G 100 -6.8 -5.40072 | GGTCAACCTGTTCGC GCGATG TCCA CGTCGC TTTTTTTACACCCAC TERM 3133 2589683 - 2589665 - g 72 -13.8 -2.81045 | overlap 2589662 2589660 CTATGCAGAAGATTA CCGGCGCA TCG CGCGCCGG CTAGTGGACTACCTC TERM 3134 2590015 - 2590039 + G 79 -8.6 -4.34402 | gap 1, opp_overlap 2590015 AGAAGGTCCAGGAGA TCGTCAGACGC GTCC GCG-CTGGCGA TTTTCCTGTGAAGGA Pnap_2446 2586714 - 2590139 + | UvrD/REP helicase TERM 3135 2590208 - 2590195 - f 74 -4.5 -4.68103 | overlap 2590197 TGAAGGCCAAGAAAA CTGCA ATCC CGCAG ATGGCCGACAGAAAG TERM 3136 2590504 - 2590530 + G 76 -8.6 -4.20834 | overlap 2590517 TCTCGACGAGACTTA CGATCTGCGTGG ACG CGGCGCAGAGCG TTTCGTTATTTTCCA Pnap_2447 2590232 - 2591161 + | hypothetical protein TERM 3137 2591159 - 2591185 + G 88 -8 -4.85599 | opp_overlap 2591159 CTGGCGGAGGCCAAA TGATGTCGACCG CAG CGCTGGACATCA TTTTTCTGGAATCCC Pnap_2448 2591158 - 2592567 + | UBA/THIF-type NAD/FAD binding protein Pnap_2449 2592632 - 2592910 + | hypothetical protein TERM 3138 2593374 - 2593388 + T 81 -8.6 -4.3129 | ACCAACACCTCCGCA CTCCAT GTC ATGGAG TTTTCCTCCTGCATC TERM 3139 2593513 - 2593535 + T 75 -6.2 -4.56597 | overlap 2593514 TCTCGGGGCAACGCC CTGAGCAGTG GGC CACTGCCAAG TTTTTCGCGCAGCAG TERM 3140 2594041 - 2594061 + T 70 -5.4 -4.48987 | overlap 2594044 TGTCGGTGTCAGCTT TCTTGCCA CCCAA TGGCATGA TTTTGATTGTCGGAC Pnap_2450 2594577 - 2594155 - | hypothetical protein TERM 3141 2594583 - 2594551 - G 74 -4.9 -4.58663 | gap 1, overlap 2594552 ATTATGTTTGAAAAA CTCG-GATGAGGTC CGATGC GACCCCATATCGAG CATCAGAATTTGCGA Pnap_2452 2596024 - 2595386 - | maleylacetoacetate isomerase Pnap_2453 2596735 - 2596034 - | fumarylacetoacetate (FAA) hydrolase TERM 3142 2596610 - 2596577 - G 84 -8.7 -4.4078 | opp_overlap 2596577 2596609 TTTGGTGAAGTAAAA GGGGCGCTCCACGGA TTTG TCCACCGGACGCCCC ATTTCCACCGCGTGG Pnap_2454 2597884 - 2596829 - | cupin 2 domain-containing protein Pnap_2455 2598493 - 2597903 - | hemerythrin HHE cation binding region TERM 3143 2598502 - 2598521 + r 78 -5.7 -4.79949 | CGTTCATATTTTTCC TCTCTGC CAAGTT GCAGGGA TTGTTTTTTTAGACA Pnap_2456 2599243 - 2598530 - | ABC transporter related TERM 3144 2598636 - 2598624 - G 71 -4.8 -4.46212 | TTTTCCAGCACAAAA TGGC GATCT GCCA ACTCCAGCAAGGGAC TERM 3145 2598998 - 2598976 - G 72 -7.7 -4.10657 | TCAGATTCGGTAAAA TCTGGCGCC CCTCT GGCACCAAA CCCAAGCCCAGCTTG Pnap_2457 2599998 - 2599246 - | ABC transporter related Pnap_2458 2600951 - 2599995 - | inner-membrane translocator Pnap_2459 2601874 - 2600948 - | inner-membrane translocator TERM 3146 2601539 - 2601515 - G 84 -8.5 -4.46112 | GGGCAGTGAAACAAA CATGGGCTGGG GAC CCCAGATCATG CGCACCACTTCATTG Pnap_2460 2603046 - 2601874 - | extracellular ligand-binding receptor Pnap_2461 2603396 - 2603082 - | Rieske (2Fe-2S) domain-containing protein Pnap_2462 2603735 - 2603406 - | aromatic-ring-hydroxylating dioxygenase, beta subunit Pnap_2464 2604381 - 2605148 + | IstB ATP binding domain-containing protein Pnap_2465 2606584 - 2605625 - | proline dehydrogenase TERM 3147 2605658 - 2605670 + g 71 -4.8 -4.50976 | opp_overlap 2605655 2605658, overlap 2605655 GCGAGCAAGCAACAT CCCA TTGGC TGGG TTTTCTCCTATGCGA Pnap_2466 2607230 - 2606589 - | GntR family transcriptional regulator TERM 3148 2607576 - 2607599 + r 77 -7.4 -4.25104 | gap 1, overlap 2607572 2607579 2607583 TTCTTCCCTTTGCGG GGC-GCGGC AGCACGC GCCGCAGCC TTTTGCTCGGCGCGC Pnap_2467 2608363 - 2607554 - | IstB ATP binding domain-containing protein Pnap_2468 2609904 - 2608360 - | integrase catalytic subunit Pnap_2469 2610199 - 2609888 - | hypothetical protein TERM 3149 2609955 - 2609933 - G 74 -9.1 -3.85698 | gap 1 GCTGTGGCGCAGAAA GCCCTGGCGC ACCA GCGCC-GGAC ACGGTGACTGGCACC TERM 3150 2610476 - 2610433 - R 93 -13.3 -3.79251 | gap 2, overlap 2610417 2610434 GACCGGATTATGAAA CCCG--CCCATCCTGGTGGCC CTCG GGCCACCAGGATGGAATCAGA GGAGAGGCAGAAAGA TERM 3151 2610475 - 2610434 - R 86 -14.6 -2.87229 | gap 2, overlap 2610417 2610433 ACCGGATTATGAAAC CCG--CCCATCCTGGTGGCC CTCG GGCCACCAGGATGGAATCAG AGGAGAGGCAGAAAG Pnap_2470 2610821 - 2610519 - | recombinase Pnap_2471 2611353 - 2610961 - | transposase IS3/IS911 family protein TERM 3152 2611738 - 2611693 - R 100 -24.9 -3.29144 | opp_overlap 2611702 2611707 CGACTTTGCGCACAA CCGATCAGACTATAGGGCCGC TTTG GCGGCCATGTAGTCTGATCGG AACTCTCGATCGTGG TERM 3153 2611702 - 2611729 + r 72 -12 -2.78935 | opp_overlap 2611693, overlap 2611707 GCACAACCGATCAGA CTATAGGGCCGC TTTG GCGGCCATGTAG TCTGATCGGAACTCT Pnap_2472 2612736 - 2611702 - | transposase IS116/IS110/IS902 family protein TERM 3154 2612216 - 2612236 + g 72 -4 -4.57474 | gap 1, overlap 2612216 2612217 AGTATTCGAAATGAG C-CCGGCAA TTCG TTGCTGGCG TTTTCTATGAGTTCA Pnap_2473 2612897 - 2613175 + | hypothetical protein Pnap_2474 2614116 - 2613247 - | 5-carboxymethyl-2-hydroxymuconate delta-isomerase TERM 3155 2613836 - 2613850 + g 81 -4.2 -4.98255 | TCGACCTGCTCGCGG GCTTCT TGG AGATGC TTTTTGTAGTTGACG Pnap_2476 2615392 - 2614388 - | cupin 2 domain-containing protein Pnap_2477 2616098 - 2615493 - | glutathione S-transferase domain-containing protein TERM 3156 2615841 - 2615858 + g 83 -6.3 -4.82901 | gap 1 GCGCTCCAGCGAGCC TGC-TGGC GGT GCCAAGCA TTTTTCTGGCACACG Pnap_2478 2616897 - 2616304 - | DSBA oxidoreductase TERM 3157 2616963 - 2616975 + r 70 -6.9 -4.10161 | overlap 2616951 CAAGCGCCACATCCC GCGCT CTT GGCGC TTTTACGCCGTACTC Pnap_2479 2618124 - 2617087 - | dihydrodipicolinate synthetase Pnap_2480 2618817 - 2618182 - | OmpW family protein TERM 3158 2618883 - 2618860 - R 86 -6.8 -5.10461 | opp_overlap 2618860 TGCATGCAACAAAAA TAGATGCG ACCGATTG CGCATCTA TTGCATGGTTAGCTC Pnap_2481 2619800 - 2618892 - | glyoxalase/bleomycin resistance protein/dioxygenase Pnap_2482 2621277 - 2619826 - | aldehyde dehydrogenase Pnap_2483 2622105 - 2621326 - | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase TERM 3159 2622158 - 2622138 - R 73 -10.4 -3.37869 | overlap 2622131 AAAAATAATCACGAA TGCCCGCC ATCCA GGCAGGCA TCCCCAGGGCTCACA Pnap_2484 2622753 - 2622169 - | aromatic-ring-hydroxylating dioxygenase, beta subunit Pnap_2485 2624111 - 2622768 - | ring hydroxylating dioxygenase, alpha subunit TERM 3160 2623904 - 2623890 - G 81 -7.1 -4.77986 | opp_overlap 2623889 2623902 GCAAACATTCAAAAA GGCTC GCACG GAGCC ATCGTTCTGACGGGA TERM 3161 2623915 - 2623942 + g 78 -5.4 -4.80882 | overlap 2623902 2623916 GAGCCATCGTTCTGA CGGGAGACGATG ACTT CATCGACGCCCA TTTTTGCTGTGACAT Pnap_2486 2624514 - 2624176 - | Rieske (2Fe-2S) domain-containing protein Pnap_2487 2625009 - 2624524 - | aromatic-ring-hydroxylating dioxygenase, beta subunit Pnap_2488 2626274 - 2625012 - | Rieske (2Fe-2S) domain-containing protein TERM 3162 2625994 - 2625960 - G 90 -8.6 -4.84359 | GTAGGGGCAGAAAAA GTCTTTGGCATGACCG TTG CGTTCACGGCAAAAAC GCATGCCACGGTGAG TERM 3163 2626228 - 2626242 + g 76 -9.2 -4.08945 | CTGCTGGTTCCTTCC CCCGGC CAC GTCGGG TTTTCCGGGAATACT Pnap_2489 2627306 - 2626320 - | oxidoreductase FAD-binding subunit Pnap_2490 2627423 - 2628379 + | LysR family transcriptional regulator TERM 3164 2629074 - 2629060 - g 82 -3.4 -5.19916 | overlap 2629061 AAAAGAGGCAAAAAA CCCAGG TCC CCCGGT GCAGCGACTCCGGCC Pnap_2491 2628931 - 2629539 + | hypothetical protein TERM 3165 2630073 - 2630084 + G 71 -5.8 -4.3208 | CAATCTGAAGCACGG GCCT GGCA AGGC TTTTGAATTCTGGGA Pnap_2492 2629576 - 2630334 + | hypothetical protein Pnap_2493 2630331 - 2630942 + | hypothetical protein Pnap_2495 2632022 - 2631468 - | hypothetical protein Pnap_2494 2630954 - 2631538 + | lytic transglycosylase, catalytic TERM 3166 2631896 - 2631906 + gT 74 -5.4 -4.5442 | CGGGTCGAAAGATGT CAAG GTT CTTG TTTTCTGATTGCCGA Pnap_2496 2632411 - 2632055 - | hypothetical protein Pnap_2497 2632633 - 2633598 + | type II secretion system protein E Pnap_2498 2633963 - 2634217 + | hypothetical protein Pnap_2499 2634497 - 2635378 + | hypothetical protein TERM 3167 2635394 - 2635451 + T 71 -11.3 -2.93723 | gap 1, opp_overlap 2635393 2635397 2635401 2635402 GCCCGAGCGTCAAAT CAAGTAACTGTGACCCAGTTGCCTGGCT GCA AGCCAGGCAACTGGG-CAAACTCGCGGG TGTGGTTGGTGACCA TERM 3168 2635448 - 2635397 - T 100 -16 -3.52204 | gap 1, opp_overlap 2635394, overlap 2635393 2635401 2635402 CGAGCGTCAAATCAA GTAACTGTGACCCAGTTGCCTGGCT GCA AGCCAGGCAACTGGG-CAAACTCGC GGGTGTGGTTGGTGA TERM 3169 2635444 - 2635401 - T 100 -17.6 -3.5013 | gap 1, opp_overlap 2635394, overlap 2635397 2635393 2635402 CGTCAAATCAAGTAA CTGTGACCCAGTTGCCTGGCT GCA AGCCAGGCAACTGGG-CAAAC TCGCGGGTGTGGTTG TERM 3170 2635443 - 2635402 - T 100 -21.1 -2.69596 | gap 1, opp_overlap 2635394, overlap 2635401 2635397 2635393 GTCAAATCAAGTAAC TGTGACCCAGTTGCCTGGCT GCA AGCCAGGCAACTGGG-CAAA CTCGCGGGTGTGGTT Pnap_2500 2635536 - 2635393 - | hypothetical protein TERM 3171 2635905 - 2635928 + H 80 -4.5 -5.03314 | gap 1, opp_overlap 2635905 2635908, overlap 2635906 GTCCAGCGGTATCAA G-CACCAGCC AAACA GGCCGGTGTC TTTTTTCCAACTGGA TERM 3172 2635906 - 2635926 + H 77 -8.2 -4.14633 | opp_overlap 2635905 2635908, overlap 2635905 TCCAGCGGTATCAAG CACCAGCC AAACA GGCCGGTG TCTTTTTTCCAACTG TERM 3173 2636024 - 2635992 - g 93 -9.1 -4.72386 | gap 1, opp_overlap 2635990 CAAATCACTCAAAAA GCTGGTCACGCCCG TCATCT CGGGCATGGCC-GC ACTGGTATCCCAGGT Pnap_2501 2635951 - 2636292 + | conjugal transfer protein TrbC Pnap_2502 2636319 - 2636642 + | conjugal transfer TrbD family protein TERM 3174 2637243 - 2637259 + G 81 -7.9 -4.46212 | GCTTCTTGTGTCGCT CTGGCAC CAC GCGCCAG TTTTGTCATGGGCAC TERM 3175 2638095 - 2638115 + G 70 -11.9 -3.15503 | overlap 2638093 TATCCGGGCGCGCAA GCCTTTGTC TTT GACAAGGGC TATTCCATGTTCCCC Pnap_2503 2636646 - 2639090 + | CagE, TrbE, VirB component of type IV transporter system TERM 3176 2639175 - 2639187 + F 80 -4.8 -5.09225 | ACTGGTTGTTTGATC GTGG GAGGG CCAC TTTTTTGCGTCAACT TERM 3177 2639279 - 2639298 + G 71 -5.6 -4.30014 | overlap 2639276 2639274 2639273 CTGCTTTCCAGCGCC GCAGTGGC GGCT GCCTTTGC TTTTGCGTTGATACC Pnap_2504 2639249 - 2639950 + | conjugal transfer protein TrbJ Pnap_2505 2639965 - 2641590 + | Type IV secretory pathway TrbL components-like protein TERM 3178 2642058 - 2642047 - g 72 -2.2 -4.72272 | GGCTCGGATCAAAAA CCTG TCTA CAAG CTGCTGGTGTCCAAC Pnap_2506 2641600 - 2643099 + | hypothetical protein Pnap_2507 2644107 - 2643196 - | hypothetical protein TERM 3179 2643693 - 2643710 + g 73 -7 -4.27584 | overlap 2643683 TGTGAGGGGTCTCCA CCCGTT CGCTGT AACGGG TTTTACCTTCCGCGT Pnap_2508 2645297 - 2644104 - | hypothetical protein Pnap_2509 2645366 - 2646019 + | conjugal transfer protein Pnap_2510 2646379 - 2647161 + | conjugal transfer protein TrbG/VirB9/CagX TERM 3180 2647278 - 2647295 + G 80 -4.8 -4.87626 | opp_overlap 2647278 CCTGGCACCAAGCGA CTGTCC AAGAAA GGGCAG TTTTTACTCTTGGGC TERM 3181 2647459 - 2647442 - g 81 -7.7 -4.48987 | overlap 2647451 TCCGTACAAGGAAAA CGCTGAA GACA TCCAGCG CAGAGCAACTGTTGC TERM 3182 2648383 - 2648405 + G 75 -4 -4.74706 | ACTTCTGGAAAACCT GGTCGTCAGC TCT GTTGGTGTCC TTTTTGGGTGTTGCC Pnap_2511 2647158 - 2648630 + | conjugation TrbI family protein Pnap_2512 2649514 - 2648780 - | cytochrome c biogenesis protein, transmembrane region Pnap_2513 2649907 - 2649527 - | thioredoxin domain-containing protein Pnap_2514 2650031 - 2650564 + | hypothetical protein TERM 3183 2651191 - 2651139 - g 91 -16.9 -3.28173 | opp_overlap 2651145, overlap 2651137 ACTACAACATGAAGA CCCCAAGGCCATTGCGCGGCATGTC GTC GCCTTGCTGCGCAACGGTCTTGGTG AAGCCAACGAGGAAA TERM 3184 2651145 - 2651185 + G 76 -13.9 -3.14132 | opp_overlap 2651139 2651137 ACATGAAGACCCCAA GGCCATTGCGCGGCATGTC GTC GCCTTGCTGCGCAACGGTC TTGGTGAAGCCAACG Pnap_2515 2650603 - 2651211 + | TetR family transcriptional regulator TERM 3185 2651762 - 2651749 - g 74 -9.5 -3.86015 | overlap 2651736 GAGGCTGCGCAGAAA GCGGC CGAA GCCGC CAGAGATGCCGCACA Pnap_2516 2651284 - 2651871 + | late embryogenesis abundant protein TERM 3186 2652247 - 2652222 - g 77 -2.4 -5.00884 | opp_overlap 2652242, overlap 2652223 ACGCGCTGCAAAAAA CGTCGGACGC GGCTCA GCGTGCGGCA GAAGCCGCTGTTGAA TERM 3187 2652310 - 2652296 - g 78 -2.8 -5.03145 | GAATCGGTCAAAAAA GCTG TCGAGTC CAGC AAGGAAGCAGCCCAG Pnap_2517 2651981 - 2652427 + | hypothetical protein TERM 3188 2652505 - 2652484 - f 71 -11.5 -2.96274 | overlap 2652479 TTCTTGACAAGTACA CCCGTCCAC ATGA GTGGGCGGG GCGGGTGAACGACAT TERM 3189 2652660 - 2652640 - g 75 -11.9 -3.55084 | overlap 2652638 GTGCAAGACGAAACA GGCAACACT TTG AGCGTTGCC AACGATACAACGACA Pnap_2518 2652625 - 2653311 + | hypothetical protein Pnap_2519 2653326 - 2655074 + | hypothetical protein TERM 3190 2655107 - 2655072 - T 73 -9 -3.85817 | gap 1 AGCGGGGGCGAGAAA TGAGCGGACCGCAGACC TTG GGCGTG-GACCCGCTCA TCGCGCTGGCGCTGG Pnap_2521 2657105 - 2655495 - | transposase IS66 Pnap_2522 2657541 - 2657188 - | IS66 Orf2 family protein Pnap_2523 2657966 - 2657529 - | transposase IS3/IS911 family protein TERM 3191 2659514 - 2659561 + H 83 -12.9 -3.28924 | opp_overlap 2659512 2659513 AAGAGATCGAGAAGC GCTTGGCGCGCGCG-CCCAAAAA TCAG TTTTTGGGTCGC-CGTGGCGAGC TTATCCGCAACGATG TERM 3192 2659763 - 2659783 + G 72 -3.8 -4.63218 | overlap 2659764 CTGTGTGGCCTGCGA GCGAGCGC ACCTG GCGCCGGC TTTTGTTCGCCGACC phnP 2659689 - 2660465 + | carbon-phosphorus lyase complex accessory protein Pnap_2525 2660462 - 2661322 + | hypothetical protein Pnap_2526 2661728 - 2661429 - | hypothetical protein Pnap_2527 2661836 - 2662453 + | hypothetical protein TERM 3193 2662622 - 2662604 - g 74 -5.3 -4.62302 | gap 1 GAATACCGCGAAAAA TGG-CTGC AATT GCAGTCCA GCTTGGAAGCCACTC TERM 3194 2663795 - 2663782 - g 75 -3.1 -4.91511 | gap 1 ACTCGATCAGAAAAA CG-CCT TTC AGGTCG GGGGGGAAACGCCCA Pnap_2528 2662475 - 2663851 + | hypothetical protein TERM 3195 2664086 - 2664069 - g 81 -4.1 -5.05782 | ACTGAGGCCAAAAAA GACCTGC GTGA GCAAATC ACGGACCGCATCGTC TERM 3196 2664692 - 2664715 + G 78 -5.2 -4.72272 | GCTTGACGGACTGAC GCTGGGTCAC GGCG GTGATCGGGC TTTTTACTCGCCAGC Pnap_2529 2664051 - 2665205 + | hypothetical protein TERM 3197 2666108 - 2666125 + G 74 -2.7 -4.93898 | opp_overlap 2666096, overlap 2666096 2666111 AAACCGGCTTTGACC TCATGAC CGGT GTCATCA TTTTTGTGCTGGTGT Pnap_2530 2665222 - 2667207 + | TRAG family protein Pnap_2531 2667227 - 2667751 + | conjugal transfer protein TraF Pnap_2532 2668369 - 2667794 - | hypothetical protein TERM 3198 2668511 - 2668478 - R 73 -5.2 -4.58395 | opp_overlap 2668482, overlap 2668496 CGCATTTCTGAAAAA CCAACGCGTTTGAC AAACTG GGCAAGCGCGTTTG CCAACTCTTCGCTCA TERM 3199 2668962 - 2668972 + r 74 -2.6 -5.07053 | opp_overlap 2668962 ATATATATCAAACAG TTTT TTG AAAA TTTTTTCGGATAATT Pnap_2533 2670973 - 2668994 - | relaxase/mobilization nuclease family protein TERM 3200 2669684 - 2669708 + g 72 -7.2 -4.19371 | overlap 2669699 CAGGCCTGATTTTTC TGACTTGTGA AGTAC TCGCAGGTCA TTTCTTGCGGCTTTG Pnap_2534 2671629 - 2671898 + | hypothetical protein Pnap_2535 2671898 - 2672176 + | hypothetical protein Pnap_2536 2673738 - 2673124 - | polyhydroxyalkonate synthesis repressor, PhaR TERM 3201 2673828 - 2673883 + r 75 -11 -3.34894 | gap 2, opp_overlap 2673843 2673871 2673872, overlap 2673827 2673831 ACGCAATTTATCTGG GTTATCTTGATTCAATGTTTTGAACC ACCAGG GGTTCAAAACATTGAAACAA-A-AAC TGTTTCAGAAAAATT TERM 3202 2673831 - 2673882 + r 72 -11.9 -2.60615 | opp_overlap 2673843 2673871 2673872, overlap 2673828 2673827 CAATTTATCTGGGTT ATCTTGATTCAATGTTTTGAACC ACCAGG GGTTCAAAACATTGAAACAAAAA CTGTTTCAGAAAAAT TERM 3203 2673870 - 2673843 - R 72 -11.5 -3.06183 | opp_overlap 2673831 2673828 2673827 GTTATCTTGATTCAA TGTTTTGAACC ACCAGG GGTTCAAAACA TTGAAACAAAAACTG Pnap_2537 2676323 - 2674053 - | (p)ppGpp synthetase I, SpoT/RelA TERM 3204 2674524 - 2674538 + g 95 -10 -4.59773 | GCCCTTGCCGCCTTT TCCAGC AGC GCTGGA TTTTTCGGACTGCCG TERM 3205 2675591 - 2675636 + g 80 -5.9 -4.72272 | gap 1, opp_overlap 2675585, overlap 2675593 GGTTCAAATCGCGTT CAAGCTGCGCGCGCAGGGCCTC CAT GAAGACCT-CGCGCTCGGCACG TTTTTCATCGAGCAG TERM 3206 2676292 - 2676311 + g 71 -5.6 -4.36903 | gap 1, overlap 2676294 2676310 TCCGGGGAAATTGCG GGGGCGTGC GTT GC-CGCCAC TTTATGTTTCATGAA Pnap_2538 2677274 - 2676354 - | alpha/beta hydrolase fold Pnap_2539 2677400 - 2678182 + | 3-hydroxybutyrate dehydrogenase Pnap_2540 2679064 - 2678219 - | N-formylglutamate amidohydrolase TERM 3207 2679183 - 2679169 - H 74 -2.1 -5.03145 | gap 1, opp_overlap 2679169 2679182 GAACTGCTCAAAAAA GC-GCT TGTA AGCTGC CTTTTGTCCTACACA Pnap_2541 2679318 - 2679908 + | OmpA domain-containing protein TERM 3208 2679946 - 2679972 + F 100 -17.4 -5.27335 | CGTTTGCCACCCACA GGCCTGCAAATC AGT GGTTTGCAGGCC TTTTTATTTCGACGC TERM 3209 2680508 - 2680520 + G 72 -2.6 -4.7373 | overlap 2680493 CTTGGTGCTGGACAT CGGC ATCGC GCTG TTTTTCCTGCCCTAC Pnap_2542 2680164 - 2680613 + | transmembrane pair domain-containing protein Pnap_2543 2681437 - 2680622 - | metallophosphoesterase Pnap_2544 2682416 - 2681445 - | diacylglycerol kinase, catalytic region TERM 3210 2682005 - 2681984 - G 76 -7.2 -4.3129 | CATTGACCAGGAAAA GCCGGCCA TTGACC TTGCCGGC CTGGACCGGCGAGAC TERM 3211 2682135 - 2682121 - G 84 -11.4 -4.15565 | GGCAGCACGCCAAAA GGGCAG CCG CTGCCC AGCACCGCGTTGGCC Pnap_2545 2683166 - 2682441 - | hypothetical protein TERM 3212 2683232 - 2683218 - H 82 -5 -5.1287 | TTCAGACTGAAAAAA CCTGAT TCG ATCAAG TCAGCCCTCAAAAAA TERM 3213 2683400 - 2683410 + H 90 -5.4 -5.16071 | AAGCCCATATCGATT GCAA AAC TTGC TTTTTGTTCCTGATT ompR 2683542 - 2684279 + | osmolarity response regulator TERM 3214 2684465 - 2684476 + G 90 -2.2 -5.5112 | CCGGGGAATCAACCT GTTC TGGA GGAC TTTTTTCTTCCTGGC TERM 3215 2685509 - 2685485 - g 76 -5.5 -4.62069 | opp_overlap 2685484, overlap 2685487 GCGTTATGGCAAAAA GCCCGGCTCCA ACA TGGCGCTGGTC GATATTTCAGCCCGG TERM 3216 2685693 - 2685679 - g 85 -5.6 -5.02074 | CCATTGCCGAAAAAA CCGTGC TGC GCATGG GCGGCCTGTTCAGCC Pnap_2547 2684388 - 2685764 + | integral membrane sensor signal transduction histidine kinase Pnap_2548 2686357 - 2685857 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Pnap_2549 2687119 - 2686391 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 3217 2686955 - 2686911 - G 86 -8.3 -4.57304 | overlap 2686913 ATTGAATCAAAGAAA CCGTCGCCCGGCGCGACCACC ACC AGCGTTCGGGCCAGACGCCCG ACCGCCAGAAAAGCC TERM 3218 2687289 - 2687325 + G 78 -3.6 -5.00616 | gap 2 CATCGTCACCTCGGA CGCCAGCACGGCC--CAG CGC CTGATGGACGAGATGGCG TTTTTTGCGCCCGAC TERM 3219 2688332 - 2688288 - g 95 -9.8 -4.62069 | opp_overlap 2688325 2688327 GCGCCATGCCAAAAA CACCGCCCACCGCGTGCTGC TGCTG GCCGAAAGCGATGGCCGGCG CGAAAGCCTGCTGGA TERM 3220 2689687 - 2689653 - g 79 -8.4 -4.26079 | overlap 2689674 CGAAACCATTGAAAA CCGCCGCCAGAAGCTC GAA GAGCTGCTGCCCGAGG CGCGCATTGCCATCG Pnap_2550 2687152 - 2690637 + | transcription-repair coupling factor TERM 3221 2690723 - 2690708 - g 78 -3.2 -5.03747 | overlap 2690710 AAATCGCTGAAAAAA CCTTTG ACCC CCAAGG TGAAACGCCAGCCCG TERM 3222 2690859 - 2690891 + G 100 -11.2 -5.00884 | GGTCATAGAGCTGTT GCCAGTGGAGTACC CCCGA GGTTCTCCGCAGGC TTTTTTACAGGCGCT Pnap_2551 2690686 - 2690994 + | virulence-associated protein VapB-like protein Pnap_2552 2690991 - 2691449 + | PilT domain-containing protein Pnap_2553 2691446 - 2691709 + | hypothetical protein TERM 3223 2692302 - 2692274 - g 71 -6 -4.26076 | overlap 2692275 CGACGGCGAGGAAAA GCGCCGCATG-CTG ATC CAGACCTGCGGC-C AGCTGGGCATCAACC Pnap_2554 2691768 - 2692478 + | phosphoserine phosphatase SerB Pnap_2555 2693828 - 2692491 - | hypothetical protein Pnap_2556 2694235 - 2693915 - | HNH nuclease Pnap_2557 2694363 - 2694839 + | bacterioferritin TERM 3224 2694886 - 2694914 + F 100 -14 -5.00616 | gap 1, opp_overlap 2694888 2694892, overlap 2694888 AGCCGGTGCATGGAA C-ACAAAGGGGCC TCAT GGCCCCTTTGTTG TTTTTTAGCCGCAAA TERM 3225 2694888 - 2694911 + F 100 -16.8 -4.61482 | opp_overlap 2694888 2694892, overlap 2694886 CCGGTGCATGGAACA CAAAGGGGCC TCAT GGCCCCTTTG TTGTTTTTTAGCCGC TERM 3226 2694911 - 2694888 - f 100 -16.8 -3.08679 | opp_overlap 2694888 2694886, overlap 2694892 CCGGTGCATGGAACA CAAAGGGGCC TCAT GGCCCCTTTG TTGTTTTTTAGCCGC TERM 3227 2694907 - 2694892 - f 91 -11.8 -4.21607 | opp_overlap 2694888 2694886, overlap 2694888 TGCATGGAACACAAA GGGGCC TCAT GGCCCC TTTGTTGTTTTTTAG TERM 3228 2695426 - 2695409 - g 83 -6.3 -4.87893 | gap 1 AAGGGCAAGCAAAAA CTGCGCGA TAT TC-CGCAG TCGATCACCGTCGTC TERM 3229 2695769 - 2695723 - g 73 -12.8 -3.17688 | overlap 2695724 CAACCAGGTCAGCAA GGCCCCGCGCCTGATCGACGAG CAC CAGGTCGATCTGACGCTGGGCA GCCATGACTATCGCC TERM 3230 2695768 - 2695724 - g 79 -16.3 -2.50291 | overlap 2695723 AACCAGGTCAGCAAG GCCCCGCGCCTGATCGACGAG CAC CAGGTCGATCTGACGCTGGGC AGCCATGACTATCGC TERM 3231 2695915 - 2695894 - g 75 -3.5 -4.83615 | overlap 2695895 CAGCCTTGACAAAAA GGGGCTGGC CGCC GCCTACCGC TGGGGCATCGGCGAG TERM 3232 2696008 - 2695975 - g 86 -5.1 -5.18726 | CCTGGACAACAAAAA CGGCGTCAACTACGG CCTG CCGTGGATCAAGCCG ACCAGCACTTCGCCA Pnap_2558 2695115 - 2697397 + | TonB-dependent siderophore receptor TERM 3233 2697425 - 2697450 + F 100 -19.1 -5.26875 | TTTTCAAAGCCTGCT GTCGCCCTGGT TTCC ACCAGGGCGAC TTTTTTACTTGCCAA TERM 3234 2697959 - 2697998 + G 100 -12.1 -4.87665 | gap 1, overlap 2697960 GGGCACCAGCCTGCA CCAGGTCCGGCCGGTGAC GCGCG GGCACCGGCTGG-CCTGC TTTTTCTGGATCGAA TERM 3235 2697960 - 2697997 + G 85 -15.6 -3.52117 | gap 1, overlap 2697959 GGCACCAGCCTGCAC CAGGTCCGGCCGGTGAC GCGCG GGCACCGGCTGG-CCTG CTTTTTCTGGATCGA Pnap_2559 2697480 - 2698163 + | putative hydroxylase Pnap_2560 2698160 - 2699350 + | FMN-dependent alpha-hydroxy acid dehydrogenase TERM 3236 2700109 - 2700073 - g 82 -10.8 -4.08767 | gap 1, overlap 2700076 2700094 2700097 CCTAGCGGCGCAAAA CGAGCGCGGCGGCGAAG AAAA CATCGCCACCG-GCTGG CATGCCATCGAGTTT Pnap_2561 2699606 - 2700808 + | putative iron-regulated protein TERM 3237 2700938 - 2700918 - g 81 -6.7 -4.77036 | opp_overlap 2700918 2700920, overlap 2700920 CCGGACGATGAAAAA CCCGGCGGC GAC ACCACCGTG TTTGCCAGCGGGCGC TERM 3238 2700949 - 2700959 + G 71 -4.6 -4.4078 | CCGTGTTTGCCAGCG GGCG CAA TGCC TTTTCGTTCCCGGCG Pnap_2562 2700819 - 2702246 + | hypothetical protein TERM 3239 2703019 - 2702965 - g 84 -11.4 -4.2349 | gap 3, overlap 2702993 GGCGCAGATGGAAAA GCC-GCTGCGCGCGGCCAAGCCCAGGG AAGC CCCCGAG-T-GGCCCCGCGCGGCCAGC GGCCAGACGGCGCAA Pnap_2563 2702243 - 2703352 + | periplasmic lipoprotein-like protein TERM 3240 2703449 - 2703500 + G 72 -8 -4.19506 | gap 3, overlap 2703452 CAGCCACGCGCCCGG CCGCATCGCCGCCTT-CCGCGCTGC TGGTC GCCGCGTGGGAAGGCGCTG--GCGG TTTTGCGGTTGGCGT TERM 3241 2704172 - 2704154 - g 78 -3.1 -5.00616 | opp_overlap 2704156, overlap 2704155 2704156 CCGCTGCGCAAAAAA GCCAG GCGCCGGTA CTGGC CCTGTTTGACGGCAG TERM 3242 2704258 - 2704296 + G 75 -11.7 -3.67775 | gap 1, opp_overlap 2704257, overlap 2704257 2704285 TGCGCCCTGAAGGAC GGCTGGGCCGTGGGTTGC CCGC GTG-TCCACGGCCTGGCC TTGTTCAATACCGAT Pnap_2564 2703358 - 2704515 + | hypothetical protein TERM 3243 2704714 - 2704732 + T 74 -6.6 -4.35524 | overlap 2704717 CCTGGGCAGCGCTTT CACGCCCT CTG GGGGCCTG TTTTGGCTTTAAAAC Pnap_2565 2704998 - 2704756 - | hypothetical protein Pnap_2566 2705159 - 2705428 + | hypothetical protein TERM 3244 2705467 - 2705446 - f 100 -17.3 -3.54029 | CGTGAGCAATCAGAA TCCCCGGCC TTCA GGCCGGGGA GCAGTCAAAAATAAG TERM 3245 2705624 - 2705639 + G 76 -9 -4.08767 | opp_overlap 2705613, overlap 2705619 AAATTGCCCGCCATG CCCATG CCGG CATGGG TTTTGACGAGATCCA Pnap_2567 2705572 - 2705805 + | hypothetical protein TERM 3246 2706178 - 2706144 - g 71 -14.1 -2.65656 | overlap 2706136 2706143 AACCCAAGGCAGAAC CCGCCCCGCCGGCTC CACCC GCGCCGCCGGTGCGG CCCGTCACGCCCAGT TERM 3247 2706509 - 2706497 - g 91 -9.1 -4.56597 | opp_overlap 2706476 GGCGTGCCGCAAAAA GCCGA GCT TCGGC AGTCCAGCGGCTTTG Pnap_2568 2705873 - 2706643 + | TonB family protein TERM 3248 2706823 - 2706782 - g 86 -16.6 -3.23216 | gap 1, opp_overlap 2706800 2706803 2706804, overlap 2706783 GGTCATCATCATCAA GGCGC-TCGACCTGCGCCG GCTCT CGGCGCAGGCCAAGGCGAC CGAAAGCTTCTGGCA TERM 3249 2706820 - 2706783 - g 86 -17.8 -2.53715 | gap 1, opp_overlap 2706800 2706803 2706804, overlap 2706782 GTCATCATCATCAAG GCGCTCGACCTGCGCCG GCTCT CGGCGCAGGCCAAG-GC GACCGAAAGCTTCTG Pnap_2569 2706666 - 2707394 + | MotA/TolQ/ExbB proton channel Pnap_2570 2707397 - 2707807 + | biopolymer transport protein ExbD/TolR Pnap_2571 2707819 - 2708022 + | hypothetical protein TERM 3250 2708178 - 2708160 - T 100 -16 -5.14965 | opp_overlap 2708160 ATTTCCATGAAAAAA GCCGACGC CAG GCGTCGGC TTTTTCACGTCAGGC TERM 3251 2708160 - 2708178 + T 100 -16 -4.62069 | opp_overlap 2708160 ATTTCCATGAAAAAA GCCGACGC CAG GCGTCGGC TTTTTCACGTCAGGC Pnap_2572 2708609 - 2708202 - | hypothetical protein TERM 3252 2708984 - 2709000 + G 71 -5.7 -4.25104 | overlap 2708969 2708949 CCAGGCGCTGGGTGG CGGCCTG GGC CTGGTCG TTTTCCTGGGCGGCG Pnap_2573 2708817 - 2709509 + | hypothetical protein TERM 3253 2710087 - 2710074 - g 100 -2.4 -6.15259 | GAATTCAAAAAAAAA CTTC GTCCAG GAAG TCGCGGCAACGCTGC Pnap_2574 2709588 - 2710121 + | transposase and inactivated derivative TERM 3254 2710193 - 2710178 - g 75 -11.8 -3.64822 | overlap 2710152 2710151 AGCGCGGCACGCAAA CGCGCC TGTG GGCGCG CAAGGGAACGCGCCC Pnap_2575 2710126 - 2710659 + | ISSod10, transposase OrfB TERM 3255 2710735 - 2710677 - T 75 -12.7 -2.58544 | gap 2, opp_overlap 2710700, overlap 2710700 CGGGATTGGTATAAG CTTTTGCCACGCCATCGAAAAAAGGGCCT TCA AGGCCCTTTTTTC-AT-GCGCGCCGCAAG CGCATCACCGCCTAC TERM 3256 2710700 - 2710714 + T 100 -11.4 -5.14563 | opp_overlap 2710677 2710700 ACGCCATCGAAAAAA GGGCCT TCA AGGCCC TTTTTTCATGCGCGC TERM 3257 2710714 - 2710700 - T 100 -11.4 -5.09225 | opp_overlap 2710700, overlap 2710677 ACGCCATCGAAAAAA GGGCCT TCA AGGCCC TTTTTTCATGCGCGC rumA 2712219 - 2710747 - | 23S rRNA 5-methyluridine methyltransferase TERM 3258 2711538 - 2711504 - G 70 -7.6 -4.08216 | overlap 2711505 TTAGCTGCGGCAAAA GCGCGCAGCCGGGCCA GGT CGGCCACGCTGAGCGG CTCCATGTGGCGCAG TERM 3259 2711892 - 2711848 - G 89 -17.2 -3.14344 | overlap 2711868 GACCTTGCCGATGAA GCGCAGGTTGTCTTCAAGCA CGCGC TGCTTGACGGCGACCTGCGC GCCGATGTGCAGGTG TERM 3260 2712005 - 2712023 + g 76 -6 -4.65916 | opp_overlap 2712019, overlap 2711970 2711999 2712008 TAGATCGCCGTCAGC GTGGCTTT TTC AAAGCTGC TTTTCTTGCGGTACA TERM 3261 2712303 - 2712328 + r 100 -11.8 -5.26875 | opp_overlap 2712303 CCCGGCATGAAAAAA GGAGCCCGGC ACACAG GCGGGGCTCC TTTTTTACTTCAGCC TERM 3262 2712328 - 2712303 - R 100 -11.8 -5.14563 | opp_overlap 2712303 CCCGGCATGAAAAAA GGAGCCCGGC ACACAG GCGGGGCTCC TTTTTTACTTCAGCC Pnap_2577 2713257 - 2712352 - | peptidase M23B TERM 3263 2712989 - 2713044 + g 70 -10.2 -3.54424 | gap 1, opp_overlap 2713009, overlap 2713008 2713009 CGGATCATGGTGTCG CCGC-GCTTGACGCTGTAATAGCCGGG TTT CCCGGCATTTTCAGCGCCCGGCAGCAG TTTGACCGGATCAAC TERM 3264 2713008 - 2713024 + g 76 -9.3 -4.07568 | opp_overlap 2713009, overlap 2712989 2713009 GCTTGACGCTGTAAT AGCCGGG TTT CCCGGCA TTTTCAGCGCCCGGC TERM 3265 2713023 - 2713009 - G 71 -12.8 -3.03124 | opp_overlap 2713009 2713008 2712989 CTTGACGCTGTAATA GCCGGG TTT CCCGGC ATTTTCAGCGCCCGG TERM 3266 2713009 - 2713023 + g 71 -12.8 -3.04398 | opp_overlap 2713009, overlap 2713008 2712989 CTTGACGCTGTAATA GCCGGG TTT CCCGGC ATTTTCAGCGCCCGG Pnap_2578 2714185 - 2713322 - | protein-L-isoaspartate O-methyltransferase TERM 3267 2713990 - 2714002 + g 78 -3.3 -5.07053 | opp_overlap 2713978 AACCGTCCGAGGCTC CCGGT TGA AACGG TTTTTTCAGATCATT Pnap_2579 2714985 - 2714200 - | stationary-phase survival protein SurE Pnap_2580 2715138 - 2716112 + | alcohol dehydrogenase Pnap_2581 2716974 - 2716135 - | hypothetical protein TERM 3268 2716413 - 2716435 + g 74 -12 -3.4252 | GCCAGATGCTGGCGG CGGCGTGC CCGCCCT GCACGCCG TTGTGCTGCATCGGG TERM 3269 2717069 - 2717054 - R 100 -10.4 -5.00616 | CGGGGTTGTAAAAAA GCCCCT GGGA AGGGGC TGGAAGCAGGGGGTT Pnap_2582 2717443 - 2717087 - | hypothetical protein TERM 3270 2717259 - 2717280 + g 100 -8.6 -5.27477 | opp_overlap 2717225 2717224, overlap 2717256 ATGTCGTGAAGGGCT GCGCCGGC AGCGCG GCCAGCGC TTTTTTCATTCAGGT TERM 3271 2717524 - 2717563 + r 95 -15.1 -3.28924 | gap 1, overlap 2717529 GCTAGAGCGCAATCT CTGTCTGCGCCAGAGGGC ATTTA GACCTCTGGCGCA-ACGG TTGTACCCGCGGGTG Pnap_2583 2718482 - 2717544 - | LysR family transcriptional regulator Pnap_2584 2718543 - 2719535 + | NAD-dependent epimerase/dehydratase Pnap_2585 2720318 - 2719578 - | NADPH-dependent FMN reductase TERM 3272 2720205 - 2720195 - G 73 -6.8 -4.33274 | opp_overlap 2720195, overlap 2720196 CGTAGAGCAGCAAAA TGCG CGG CGCA TGCGCGCTGGCCGTG Pnap_2586 2720736 - 2720305 - | arsenate reductase TERM 3273 2720947 - 2721003 + G 70 -10 -3.59979 | overlap 2720948 2720952 GTGGCCGGCCCCGAC GGACTG-ACACCCGGCGCCATGGCCGAG CAG CT-GGCCGTGGCGCCGAGCGCGCTGTCG TTTCACCTGAAAGAG TERM 3274 2720948 - 2721002 + G 72 -13.5 -2.75844 | overlap 2720947 2720952 TGGCCGGCCCCGACG GACTG-ACACCCGGCGCCATGGCCGAG CAG CT-GGCCGTGGCGCCGAGCGCGCTGTC GTTTCACCTGAAAGA Pnap_2587 2720818 - 2721171 + | regulatory protein, ArsR TERM 3275 2721149 - 2721171 + F 82 -5.5 -4.98758 | overlap 2721139 2721136 GCCAGGCCTGCGGCG TCGGCACGC CGCCT GCTTGCTGA TTTTTATGCCTTTTT Pnap_2588 2721267 - 2721770 + | protein tyrosine phosphatase Pnap_2589 2721797 - 2722849 + | arsenical-resistance protein TERM 3276 2722971 - 2722945 - T 89 -9.3 -4.57569 | CCACTTCTGGAAAAA CTGCGCCCGGC CCATC GCCGGGTCCAG CTGGTAGCCGGCAAA Pnap_2590 2723442 - 2722921 - | GCN5-related N-acetyltransferase TERM 3277 2723665 - 2723639 - H 88 -10.1 -4.40237 | gap 1 CACCACACATCAAAA TGCCGCG-CCGG ACAC CCTGTCGCGGCA TGCAACAGGACCGCT TERM 3278 2723888 - 2723851 - g 80 -14.7 -3.16564 | gap 1 CCGCCACGCCAGCAA GCGCTG-CCGCCGGACCC GGC GCGGCCGGCGGGCGGCGC GGCGCACCGGCCACC Pnap_2591 2723682 - 2725073 + | RND family efflux transporter MFP subunit TERM 3279 2725118 - 2725092 - g 72 -13.6 -2.76263 | opp_overlap 2725095 2725096, overlap 2725089 CGCACGACCCAAGCA GCACGCCGGGCG CGT CATCCGGCGCGC CCGAGGCTTTTGACG TERM 3280 2725095 - 2725124 + G 71 -12.7 -3.04398 | opp_overlap 2725092 2725089, overlap 2725096 ACGACCCAAGCAGCA CGCCGGGCGCGTC ATCC GGCGCGCCCGAGG CTTTTGACGGGCGCG TERM 3281 2725096 - 2725125 + G 78 -10 -4.07568 | gap 2, opp_overlap 2725092 2725089, overlap 2725095 CGACCCAAGCAGCAC GCC--GGGCGCGTC ATCC GGCGCGCCCGAGGC TTTTGACGGGCGCGA TERM 3282 2725493 - 2725515 + G 74 -14.1 -2.90496 | opp_overlap 2725492, overlap 2725491 CAGGCCGCCATCAAC GCCGGCGGC TCGCT GCTGCCGGC TGATTTGCCCGCGCC TERM 3283 2726160 - 2726128 - g 73 -12.6 -3.16564 | GGTGGACGCCATCAA GGCACGCCTGCCCG AGCTG CAGGCCGGCCTGCC GACCTCGATGCGCGT TERM 3284 2727808 - 2727826 + G 78 -6.6 -4.56597 | opp_overlap 2727784 GGACATCGCCATGCC GGCCAGTG TGA CGCTGACC TTTTTGGGCGCGGCC Pnap_2592 2725070 - 2728396 + | acriflavin resistance protein TERM 3285 2728572 - 2728550 - f 80 -5.5 -4.9448 | gap 1, opp_overlap 2728550 2728551, overlap 2728536 2728551 AGTCACCAAAGAAAA GGCGACCCGG CTGT CTGGGTC-CC TTCGCTGCGCTACGG TERM 3286 2729078 - 2729100 + F 80 -5.5 -4.9448 | gap 1, opp_overlap 2729078 2729090, overlap 2729078 2729095 CCGTAGCGCAGCGAA GG-GACCCAG ACAG CCGGGTCGCC TTTTCTTTGGTGACT TERM 3287 2729766 - 2729727 - g 82 -2.9 -5.14563 | gap 3, overlap 2729728 TGGTGCAGCAAAAAA TCGCCCAGGTGTCCGGCGTC GGC GACGT-GGA-A-CTGGGCGG CGGCTCGCTGCCCGC TERM 3288 2729891 - 2729839 - g 78 -14.5 -3.10796 | CGTCAGCATGGAAGA CGTGCGCGCCGCGCTGCAGGCCGCC AAC GCCAACCGGCCGCGCGGCGCGATTG AAGGCAACGGCCAGC TERM 3289 2730277 - 2730295 + G 86 -8.8 -4.56597 | overlap 2730283 CTCGATTGCGCTGGT GGTGCTGG TGG TCAGCGCC TTTTTGCGCAGCGCG TERM 3290 2730887 - 2730898 + G 77 -2.2 -5.00616 | gap 1 TATCTCTACATCGCC GCACC CAA GG-GC TTTTTTCCGCAGCAA Pnap_2593 2729231 - 2732449 + | acriflavin resistance protein TERM 3291 2732753 - 2732781 + G 70 -10.2 -3.54424 | overlap 2732755 ATGCGCAGGCGCGCG CCGTGATGCGCG AGCAG CGCGCGTCGCTG TTTCCCACAGTCACG TERM 3292 2733568 - 2733524 - g 79 -13.7 -3.53012 | gap 2, opp_overlap 2733491 TGTCGGCGGCGCAAA CGCTG--TTCAACGCCGGCGC CACCC GCGCCCGCGTCGAAGGCAGCG AAGCGGCGCATGCGC Pnap_2594 2732458 - 2733891 + | RND efflux system outer membrane lipoprotein TERM 3293 2734093 - 2734117 + F 74 -4.2 -4.72986 | overlap 2734085 2734110 2734112 GAGCATTGGCGGCAT CGCCTTCATG ATTGG CATGGGCGCG TTTTTCCTGCGCCTG Pnap_2595 2734486 - 2734878 + | hypothetical protein Pnap_2596 2734884 - 2735189 + | hypothetical protein TERM 3294 2735262 - 2735280 + T 75 -6.7 -4.45765 | AGCCTTGCTATTTGC CCTGCTT GCCAG AAGCGGG TTTGTTCCTTTTCGC Pnap_2597 2735811 - 2735254 - | rare lipoprotein A Pnap_2598 2735835 - 2736122 + | hypothetical protein TERM 3295 2736405 - 2736431 + F 70 -6.5 -4.07687 | overlap 2736387 GGAAGCTTGGCTCCT GCTTCGCTCCA AGTTC TGGGGCAAGGC TTTTGGACCCGAGGT Pnap_2600 2736710 - 2737114 + | glyoxalase/bleomycin resistance protein/dioxygenase Pnap_2601 2738164 - 2737166 - | ribokinase-like domain-containing protein TERM 3296 2738461 - 2738451 - g 78 -3.2 -5.0538 | GCCGAGGGCAAAAAA CTGG GCG CCAA GGTCATCAGCGGCTC TERM 3297 2739047 - 2739033 - g 75 -2.8 -4.8622 | GCCGGCAAGGAAAAA GACG TGGTGAT CGTC TCGGTGGACGGCGGC Pnap_2602 2738295 - 2739293 + | periplasmic binding protein/LacI transcriptional regulator TERM 3298 2739867 - 2739851 - g 70 -7.9 -4.10552 | TTCGATGAAATGAAA GGCGCGT CCA ACGCGGC CTGGGACTCGGGCCT TERM 3299 2739885 - 2739899 + G 86 -4.9 -5.24129 | GGGACTCGGGCCTGT CGCCG AACAG CGGTG TTTTTTATGGCGGAG TERM 3300 2740030 - 2740018 - g 79 -9.1 -4.17762 | overlap 2740020 CATGGGCGAAAACAA GACCG CCA CGGTC AATGCCGGCAGGGTT Pnap_2603 2739467 - 2740474 + | porin TERM 3301 2740544 - 2740572 + F 75 -13.1 -2.54896 | overlap 2740549 GGGTAACGGGTAACG TGCAGGCCCCCGT CAC ACCGGGGCTTGCG TCGGTTCCCTCGCGA Pnap_2604 2740617 - 2741570 + | inner-membrane translocator Pnap_2605 2741570 - 2742361 + | ABC transporter related TERM 3302 2742392 - 2742372 - f 71 -9.7 -3.57561 | opp_overlap 2742376, overlap 2742350 2742373 CGTGAACCCGGCAAA CGCATGGAG GCC CTCCATGCT TAAAGGCATCGATCC TERM 3303 2742391 - 2742373 - f 79 -13.2 -2.74322 | opp_overlap 2742376, overlap 2742350 2742372 GTGAACCCGGCAAAC GCATGGAG GCC CTCCATGC TTAAAGGCATCGATC Pnap_2606 2742388 - 2742840 + | RbsD or FucU transport Pnap_2607 2742837 - 2744051 + | ROK family protein TERM 3304 2744947 - 2744931 - g 74 -2.1 -4.82901 | CTGCCTGCAGAAAAA CCCGGCC ATC AACCTGG TCTACACCATCAATG TERM 3305 2745219 - 2745165 - g 93 -14.8 -4.08692 | opp_overlap 2745173 CAATTCCGGCCAAAA GGTCAGCGGCTACACCGATACCGGCG TGA CTCTGGTCTCGGCCAAGCCGCTGCCC GGCGTGTACAGCCTG Pnap_2608 2744275 - 2745276 + | periplasmic binding protein/LacI transcriptional regulator Pnap_2609 2746760 - 2745429 - | phosphoglucosamine mutase Pnap_2610 2747755 - 2746904 - | dihydropteroate synthase TERM 3306 2747806 - 2747834 + r 72 -11.8 -2.69151 | opp_overlap 2747812, overlap 2747812 AATGGTCAGCCCAAT GAAAAACCGGGG ACTTG CCCCGGTTTTTA TGCTGTCTGGCGAAC TERM 3307 2747828 - 2747812 - R 100 -10.8 -4.87291 | opp_overlap 2747806 2747812 CAGCCCAATGAAAAA CCGGGG ACTTG CCCCGG TTTTTATGCTGTCTG TERM 3308 2747812 - 2747828 + r 100 -10.8 -4.96762 | opp_overlap 2747812, overlap 2747806 CAGCCCAATGAAAAA CCGGGG ACTTG CCCCGG TTTTTATGCTGTCTG Pnap_2611 2749790 - 2747862 - | ATP-dependent metalloprotease FtsH TERM 3309 2748961 - 2749006 + g 78 -11.7 -3.76224 | gap 1, overlap 2748965 2748995 TGTTCGCGCTCGTCA TTGCCGCCGCCCAC-GCCAGCG CCA CGCTGGCGGCCGACGGCGTCGA TTTCATCGATGAAGA Pnap_2612 2750677 - 2749940 - | ribosomal RNA methyltransferase RrmJ/FtsJ TERM 3310 2751022 - 2751009 - g 100 -3.8 -5.79588 | overlap 2751019 GGAAAAGGAAAAAAA GGTC AGCGAA GACC GCATGGCCGGCCCGC Pnap_2613 2750719 - 2751195 + | hypothetical protein TERM 3311 2751209 - 2751239 + F 100 -18.5 -3.87815 | opp_overlap 2751216, overlap 2751216 GATCCTGCCTGCAGA TGCAAAACCGACC TCGCT GGTCGGTTTTGCA TTTCTCAGGGTCAAA TERM 3312 2751232 - 2751216 - f 84 -9.4 -4.2349 | opp_overlap 2751209 2751216 CCTGCAGATGCAAAA CCGACC TCGCT GGTCGG TTTTGCATTTCTCAG TERM 3313 2751216 - 2751232 + F 85 -9.4 -4.39571 | opp_overlap 2751216, overlap 2751209 CCTGCAGATGCAAAA CCGACC TCGCT GGTCGG TTTTGCATTTCTCAG TERM 3314 2752095 - 2752077 - g 70 -10.3 -3.55444 | CCGTGATGCGCGAAA TCCTGGC CTTGC GCCAGGA GGAATCCCGGCTGCT TERM 3315 2752862 - 2752882 + G 71 -8.1 -3.9122 | overlap 2752864 GCCCATGTCGATACC GGCGAGCCG CTG CCGCGCGCC TTGTTTGAGAAGATG TERM 3316 2753276 - 2753246 - g 78 -10.5 -4.10453 | gap 2, opp_overlap 2753261, overlap 2753248 GAAACCGGCCGAAAA TACCGCCAGGCCATC CTG GA-GGCC-GGCGGCA GCCGCCCGGCCATGG TERM 3317 2753274 - 2753248 - g 73 -10.9 -3.64488 | gap 2, opp_overlap 2753261, overlap 2753246 AACCGGCCGAAAATA CCGCCAGGCCATC CTG GA-GGCC-GGCGG CAGCCGCCCGGCCAT Pnap_2614 2751305 - 2753362 + | oligopeptidase A TERM 3318 2753767 - 2753756 - g 85 -5.8 -5.08824 | overlap 2753757 CCTTTAGCGAAAAAA CCGT CACG ACGG CGGCGGACAGTGGCG Pnap_2615 2753386 - 2754075 + | glutaredoxin Pnap_2616 2754862 - 2754113 - | ribose-5-phosphate isomerase A TERM 3319 2755142 - 2755170 + G 71 -8.2 -3.89215 | gap 2, opp_overlap 2755138 TGGACAAGAATGCCC GCTGCATCGACGGC CTG GCCG-CGATG-GGC TTTGGCTTTGTCGAG Pnap_2617 2754928 - 2755980 + | dihydroorotate dehydrogenase 2 TERM 3320 2756170 - 2756144 - f 71 -11.5 -2.92171 | opp_overlap 2756158, overlap 2756141 TAGAGTTGGAAATCA GCCCGCCTGCG CCAGC CGCAGGCAGCC AGCGCCTCTCTTGCC TERM 3321 2756597 - 2756579 - g 70 -11.6 -3.11732 | overlap 2756570 GCCAAACGCACTGAA CTGGGCGC CGC GCGCCCGG CGCTCAAGGGCACGC TERM 3322 2756776 - 2756821 + G 100 -12 -4.7497 | gap 3, overlap 2756780 CACCGGCTTGCCGCC GGCGGTTGCGGC-CTCGCTCCTG ATG CAGG-GCGAGCGCTGCAGC-GTC TTTTTGCTGGCTGAA TERM 3323 2756780 - 2756818 + G 78 -14.7 -2.98873 | overlap 2756776 GGCTTGCCGCCGGCG GTTGCGGC-CTCGCTCCTG ATG CAGG-GCGAGCGCTGCAGC GTCTTTTTGCTGGCT TERM 3324 2757124 - 2757094 - g 77 -2.6 -4.98857 | gap 2, opp_overlap 2757104, overlap 2757095 2757096 ACGCAACGACAAAAA CCTGCTGCTCTGGC TGCCC GCC-GAGC-GCAAA GCCATGTGGTATCCG TERM 3325 2757173 - 2757184 + G 76 -5.8 -4.65895 | overlap 2757166 ATCCAGGTGATCGGC CAGG CCAA CCTG TTTTTACGTCCCGAA Pnap_2618 2756243 - 2757214 + | hypothetical protein TERM 3326 2757674 - 2757635 - g 71 -5.6 -4.25104 | gap 1, opp_overlap 2757672 CGCTGGGCACCAAAA GCCAGCAGTTCAGCA-AGG TCG CCTATGCCGTCATGCCGGC CGGGGCCGGGCCTTA Pnap_2619 2757211 - 2757990 + | hypothetical protein Pnap_2620 2758314 - 2758057 - | hypothetical protein Pnap_2621 2758394 - 2758990 + | 3'-5' exonuclease Pnap_2622 2759689 - 2759051 - | hypothetical protein TERM 3327 2759564 - 2759543 - G 89 -11.5 -4.36914 | opp_overlap 2759561 CTCTTCTTCATAAAA GCTGGCCGC GCCT GCCGCCAGC GACTTGGAGCCGCCG TERM 3328 2760575 - 2760594 + G 78 -7 -4.57073 | overlap 2760576 GCCTTGGCAATTTCC AGCCGGCG CAGG CGCTGGCG TTTTTGCGGCACATG Pnap_2623 2759782 - 2761035 + | hypothetical protein Pnap_2624 2762200 - 2761157 - | helix-turn-helix domain-containing protein TERM 3329 2762244 - 2762229 - H 78 -11.8 -3.27297 | overlap 2762227 AGGCATGAAGCAACA GCGCCC GGCT GGGCGC AAGGATTCAAGCCCA Pnap_2625 2762407 - 2763798 + | ethanolamine transproter TERM 3330 2764248 - 2764234 - g 76 -5.6 -4.56597 | opp_overlap 2764237, overlap 2764195 CCTGGTTGCCAAAAA GTGCCG CGT CGTCAC CCGGTTTCGCAACAC Pnap_2626 2763806 - 2765203 + | ethanolamine ammonia lyase large subunit Pnap_2627 2765226 - 2766086 + | ethanolamine ammonia-lyase small subunit Pnap_2628 2768716 - 2766092 - | alanyl-tRNA synthetase TERM 3331 2766758 - 2766772 + g 72 -4.2 -4.56597 | overlap 2766760 GATGCTCAGCACGCG CACGGA GTC TCCGTA TTTTTCGCCGAACAG TERM 3332 2767229 - 2767256 + g 73 -8.5 -4.10453 | gap 1, opp_overlap 2767229, overlap 2767219 2767253 GCTTTCGGCGTAGAA CGGCGTCGT-GT CGAGC ACGATGACGCCG TTTTGACCGGCTTTC Pnap_2629 2770180 - 2768789 - | GntR family transcriptional regulator TERM 3333 2769066 - 2769034 - G 70 -12 -3.14527 | opp_overlap 2769043, overlap 2769022 2769032 CAATCGCCAGCAACA GGCTGGC-CAGGCGCC GCT GGC-CCAGCGCCAGCC GGTCCCGCAGCGTCT TERM 3334 2769822 - 2769844 + g 74 -11.9 -3.53012 | opp_overlap 2769814 GTGAACAGCCAGTCG CCGGGCAGC CAGCC GCAGCCCGG TTTGCAGCGCAGCGC TERM 3335 2770429 - 2770451 + G 71 -6.2 -4.25104 | opp_overlap 2770391, overlap 2770430 GGCAGCCATTCCGCG CGGCGTGG GCCACAG CCACGCCA TTTTCATCGCCAAGG Pnap_2630 2770364 - 2771656 + | 4-aminobutyrate aminotransferase Pnap_2631 2771720 - 2772796 + | spermidine/putrescine ABC transporter ATPase subunit TERM 3336 2773859 - 2773871 + G 70 -7.7 -4.10161 | CCGACCAGGGTGAAG CGCTT GAA AAGCG TTTTGCAGCCTGGTC Pnap_2632 2772865 - 2773896 + | extracellular solute-binding protein TERM 3337 2774891 - 2774931 + G 76 -5.5 -4.61231 | gap 3, opp_overlap 2774873 2774889 TGCCGGGCAATTACG TGCGCGCC-GCCGTGTCGCT GGGC AGC-ACGCCGCTGGC-CGCA TTTTTCCGGGTGTAC Pnap_2633 2773927 - 2775198 + | binding-protein-dependent transport systems inner membrane component Pnap_2634 2775206 - 2776033 + | Fis family transcriptional regulator Pnap_2635 2776062 - 2777009 + | putative agmatinase TERM 3338 2778201 - 2778230 + G 76 -5.6 -4.56597 | gap 1, opp_overlap 2778218, overlap 2778188 AAGGGCGGCAAGCTG CTGGCCGGCG-GC CACAA GCTCGAAGGCCAG TTTTTCGAGCCGACG Pnap_2636 2777124 - 2778590 + | succinic semialdehyde dehydrogenase Pnap_2637 2780832 - 2778556 - | FMN-binding domain-containing protein TERM 3339 2780141 - 2780153 + g 80 -4.7 -4.90778 | TCGGGCAGGACATGC GCCGC CGG GCCGC TTTTCTTTCGGTCGG Pnap_2638 2781871 - 2780837 - | ApbE family lipoprotein TERM 3340 2781112 - 2781141 + g 75 -4.2 -4.70583 | AATCTCCCGAGGTCG CCACGCTGCG CCCGTCCATT TGCAGCGCGG TTTTATATTCATCCG TERM 3341 2781355 - 2781371 + g 72 -4.3 -4.66833 | overlap 2781356 GGAAGCTGACCTGAT CCTGCGT AAA GCGCAGA TTTTTCCAGTTGACC TERM 3342 2782027 - 2782015 - H 71 -4.7 -4.56597 | overlap 2782016 2782017 CGCGGCTCTGAAAAA TCCCG CTG CGGGC AAAACGCCCGGCCTG TERM 3343 2782051 - 2782032 - H 74 -7.8 -4.07568 | gap 1, opp_overlap 2782034, overlap 2782017 2782033 CCGCTGCGGGCAAAA CGCCCGGCC TGC GGC-GGGCA GCGTTCCCTATGAAA Pnap_2639 2782142 - 2782630 + | hypothetical protein Pnap_2640 2783233 - 2782616 - | two component LuxR family transcriptional regulator Pnap_2641 2784650 - 2783244 - | integral membrane sensor signal transduction histidine kinase Pnap_2642 2785296 - 2784733 - | Sel1 domain-containing protein TERM 3344 2785058 - 2785076 + g 71 -5.8 -4.37092 | opp_overlap 2785052, overlap 2785059 TCAAAAATCTCGATG GCGGCGCC ATG GTCGCCGG TTTTGTCAGCGACAT TERM 3345 2785392 - 2785378 - H 89 -9.2 -4.67982 | opp_overlap 2785390 2785391, overlap 2785389 TCGTAGTCAAGAAAA CCGGCG AAA CACCGG GGCCGATCAAGGTCG TERM 3346 2785403 - 2785423 + H 83 -14.7 -2.71263 | opp_overlap 2785389 2785403 2785416, overlap 2785391 2785390 ACCGGGGCCGATCAA GGTCGGGCA AAA TGCCCGGCC TGCTTCGGGCCAATT TERM 3347 2785423 - 2785403 - H 81 -12.5 -3.14211 | opp_overlap 2785403 2785391 2785390, overlap 2785389 2785416 ACCGGGGCCGATCAA GGTCGGGCA AAA TGCCCGGCC TGCTTCGGGCCAATT TERM 3348 2785506 - 2785490 - H 100 -7.9 -5.7946 | TGCGCAATAAAAAAA CCACGCG TTT CGCACGG CCATCAGGCCCATGA TERM 3349 2785828 - 2785853 + H 100 -10.5 -5.60689 | gap 1, opp_overlap 2785828 CATAACACCTCAAAA CCCGC-GTATCT CAT AGGTACAGCGGG TTTTTTGTTGTCTCA TERM 3350 2785853 - 2785828 - H 77 -8.3 -4.20712 | gap 1, opp_overlap 2785828 CATAACACCTCAAAA CCCGC-GTATCT CAT AGGTACAGCGGG TTTTTTGTTGTCTCA TERM 3351 2785932 - 2785887 - H 73 -10.4 -3.34043 | opp_overlap 2785889 2785893 2785894 2785896, overlap 2785889 2785890 GGTATCACTGGATAA CATGGCATACCGCCATTTGT GACGGT ACTTATGGCGGTATGCCCAG ATACCGCCAGCCCAC TERM 3352 2785930 - 2785889 - H 74 -11.6 -3.23869 | opp_overlap 2785889 2785893 2785894 2785896, overlap 2785887 2785890 TATCACTGGATAACA TGGCATACCGCCATTTGT GACGGT ACTTATGGCGGTATGCCC AGATACCGCCAGCCC TERM 3353 2785929 - 2785890 - H 83 -15.1 -2.54 | opp_overlap 2785889 2785893 2785894 2785896, overlap 2785889 2785887 ATCACTGGATAACAT GGCATACCGCCATTTGT GACGGT ACTTATGGCGGTATGCC CAGATACCGCCAGCC TERM 3354 2787097 - 2787080 - g 74 -5.5 -4.48299 | gap 1, overlap 2787081 GGACACGGAAAGAAA GGC-CCGC TGG GCAGTGCC TACGACCGCTCAGAG Pnap_2643 2785967 - 2787208 + | phage integrase family protein TERM 3355 2787400 - 2787374 - g 81 -4.2 -5.07567 | CCACACCCTAAAAAA GACCTGGGCCTG GGG CTGGTCAAGGCC ATCCGGCGGCAGGCC Pnap_2644 2787221 - 2787424 + | YcfA family protein Pnap_2645 2787439 - 2787852 + | hypothetical protein Pnap_2646 2787960 - 2788490 + | hypothetical protein Pnap_2647 2788573 - 2788872 + | phage transcriptional regulator, AlpA Pnap_2648 2788963 - 2789250 + | hypothetical protein TERM 3356 2789299 - 2789268 - g 93 -7.8 -5.14965 | overlap 2789270 ACGCCCATGAAAAAA GCCGCCGGGGGCGT CAAG ACCACCACGGCGAC TGCATCACATAACGC TERM 3357 2789474 - 2789487 + G 81 -3.7 -5.06451 | ATACGCGGGCAACCT CCCCG ACAG CGAGG TTTTTTCACGTCCTG Pnap_2649 2789247 - 2789873 + | hypothetical protein Pnap_2650 2789870 - 2790214 + | hypothetical protein TERM 3358 2790272 - 2790282 + G 74 -2.4 -4.86731 | opp_overlap 2790264, overlap 2790270 2790271 TTGAAGACGCCTTGA GCGC GGC GCGG TTTTATTTGCGAGCG Pnap_2651 2790211 - 2790573 + | hypothetical protein Pnap_2652 2790566 - 2793007 + | hypothetical protein TERM 3359 2793096 - 2793063 - g 70 -11.9 -3.16881 | opp_overlap 2793063 2793065, overlap 2793050 TATGGACGCTACGAA CGCTACAGAAACC CTTTTTGT AGTTTCTGTAGCG TCCATTCCGGCACAC TERM 3360 2793065 - 2793085 + G 70 -7.7 -4.05033 | opp_overlap 2793063 2793050, overlap 2793063 TGGACGCTACGAACG CTACAGAAA CCC TTTTTGTAG TTTCTGTAGCGTCCA Pnap_2653 2793004 - 2793540 + | hypothetical protein Pnap_2654 2793709 - 2794143 + | hypothetical protein TERM 3361 2794176 - 2794193 + F 83 -9.8 -4.1711 | opp_overlap 2794175 TGAGGAATACCCAAG GCCCGC CACTGA GCGGGC TTTGTTGCGCCTGGT Pnap_2655 2794661 - 2795299 + | hypothetical protein Pnap_2656 2798238 - 2795491 - | multi-sensor signal transduction histidine kinase TERM 3362 2798190 - 2798169 - G 71 -5.1 -4.44974 | gap 1, overlap 2798171 CGAAAGCCGACAAAA TAGCGATGCC GCT GGC-CCGCCA TTTCCTTCGGAGACA Pnap_2657 2798958 - 2798320 - | 3-oxoacid CoA-transferase, B subunit TERM 3363 2798919 - 2798936 + g 71 -8.3 -3.93782 | overlap 2798920 CGTCTTCGAGTTCCT GGGCGGC GCGC GCCGCCA TTTGGTCTTGGGTCC Pnap_2658 2799779 - 2798961 - | 3-oxoacid CoA-transferase, A subunit TERM 3364 2799072 - 2799113 + g 76 -5.7 -4.62471 | overlap 2799073 2799084 GACCTTGGCCAGGAC GGCATCGACGGGCGCTTCG GTCA CGGTGCGTTTTTCGATGCG TTTTTCAGGGTTCGG TERM 3365 2799084 - 2799101 + g 78 -4.7 -4.69027 | overlap 2799073 2799072 GACGGCATCGACGGG CGCTTCG GTCA CGGTGCG TTTTTCGATGCGTTT TERM 3366 2799444 - 2799429 - G 75 -11.8 -3.61398 | opp_overlap 2799432 2799438 2799443, overlap 2799430 GGTCTTGGTGAAGAA CGCCGG AATG CCGGCG CCGCCGGCGCGCAGC TERM 3367 2799467 - 2799430 - G 72 -14.1 -2.76696 | gap 1, opp_overlap 2799432 2799438 2799443, overlap 2799429 GTCTTGGTGAAGAAC GCCGGAATGCCG-GCGCC GCC GGCGCGCAGCTTTTCGGC CAGCGTGCCCTGCGG TERM 3368 2799438 - 2799459 + g 70 -7.9 -4.07885 | gap 1, opp_overlap 2799429 2799430, overlap 2799432 2799443 GAAGAACGCCGGAAT GCCG-GCGCC GCC GGCGCGCAGC TTTTCGGCCAGCGTG Pnap_2659 2799890 - 2800444 + | putative PAS/PAC sensor protein TERM 3369 2800457 - 2800427 - T 100 -16.3 -4.57073 | gap 1, overlap 2800428 2800429 2800431 GATCTGGTGCAAAAA CTGATGGCTGGCGA ATAA TCGCCAGCCATC-G CTAAAACCGATAAAT TERM 3370 2800457 - 2800428 - T 100 -16.5 -3.33922 | overlap 2800427 2800429 2800431 ATCTGGTGCAAAAAC TGATGGCTGGCGA ATAA TCGCCAGCCATCG CTAAAACCGATAAAT TERM 3371 2800456 - 2800429 - T 100 -20 -2.60032 | overlap 2800427 2800428 2800431 TCTGGTGCAAAAACT GATGGCTGGCGA ATAA TCGCCAGCCATC GCTAAAACCGATAAA TERM 3372 2800454 - 2800431 - T 90 -16.8 -2.83903 | overlap 2800429 2800427 2800428 TGGTGCAAAAACTGA TGGCTGGCGA ATAA TCGCCAGCCA TCGCTAAAACCGATA Pnap_2660 2800873 - 2800514 - | ribosomal subunit interface protein, putative TERM 3373 2801159 - 2801169 + r 78 -6.8 -4.57569 | CCTAAACGGGATCGT GGAC TCA GTCC TTTTTAAAACCCTCG Pnap_2661 2801540 - 2801163 - | carboxymuconolactone decarboxylase TERM 3374 2801577 - 2801563 - H 84 -6.4 -5.00616 | overlap 2801575 TTGCTCCTGAAAAAA CCGTCA GCA TAACGG CGCAGCCCATGCTTG Pnap_2662 2801729 - 2803189 + | catalase Pnap_2663 2804236 - 2803229 - | hypothetical protein TERM 3375 2803321 - 2803337 + g 72 -2.1 -4.79223 | overlap 2803323 GCTCTGCGGTGCCGC CCCCGAC CAT GTCGCCG TTTTTCGTGATCTGG TERM 3376 2804167 - 2804187 + g 72 -7.6 -4.13014 | gap 1 GGCCAAGGGTGGACA TGGCCG-TG CCAG CAGCGGCCA TTTTCAGGATGTCGC Pnap_2664 2805994 - 2804552 - | aldehyde dehydrogenase TERM 3377 2805193 - 2805183 - G 88 -8.2 -4.72272 | CCGGTCGAGTAAAAA GCGC TTT GCGC GCACAATTCCACGGC Pnap_2665 2807027 - 2806029 - | hypothetical protein TERM 3378 2806577 - 2806596 + g 72 -12.2 -3.30159 | GCTGGCCGCTGGCAT GGGCAATG GAGC CATTGCCC TTGTAAAACCATTCG TERM 3379 2806979 - 2806991 + g 78 -10.5 -4.07455 | opp_overlap 2806979 CGTCGGCTTGAAGCA CGCCG ACC CGGCG TTTGTCCTGTTCGTC Pnap_2666 2808801 - 2807062 - | dihydroxy-acid dehydratase TERM 3380 2807880 - 2807857 - G 73 -3.1 -4.72272 | gap 1 GTCTTCCATCAAAAA GCGG-CCCGA GGGCA TCAGGTCCAC GATGGTCGGCGTGCC Pnap_2667 2808985 - 2809947 + | LysR family transcriptional regulator TERM 3381 2810208 - 2810162 - g 73 -2.8 -4.74801 | opp_overlap 2810194 GAAGTGCAGGAAAAA GCCGG-CTTCGTGCCCAACGTC TTTCT GGCGCTGG-CGCGCCGGCCGGC CGAATGGCGCGCCTT TERM 3382 2810194 - 2810221 + G 70 -10.4 -3.65046 | opp_overlap 2810162 CGTCTTTCTGGCGCT GGCGCGCCGGCC GGCC GAATGGCGCGCC TTCTTCGCCTACCAC TERM 3383 2810412 - 2810389 - g 76 -7.5 -4.26327 | gap 1, opp_overlap 2810400 CATTTATGAAAAGAA GCCA-CTGGT GGCCG ACCAGGTGGC GGTGAATTACCGCAA Pnap_2668 2810081 - 2810689 + | uncharacterized peroxidase-related enzyme Pnap_2669 2810727 - 2811023 + | hypothetical protein TERM 3384 2812988 - 2813009 + G 81 -10.1 -4.18018 | overlap 2812989 CCCAGGCGGTGGCCA GGCAGCTCG GATC CGAGCTGCA TTTTCAGTCGGCGCA TERM 3385 2812989 - 2813008 + G 75 -13.6 -3.10597 | overlap 2812988 CCAGGCGGTGGCCAG GCAGCTCG GATC CGAGCTGC ATTTTCAGTCGGCGC Pnap_2670 2811241 - 2813064 + | integral membrane sensor signal transduction histidine kinase TERM 3386 2813127 - 2813138 + G 82 -5.8 -4.82901 | GTGACGCTGCGCTGC GAGC TGGT GCTC TTTTTGTCCGAAGAG Pnap_2671 2813061 - 2813783 + | two component transcriptional regulator TERM 3387 2813844 - 2813813 - T 75 -11.6 -3.33696 | gap 1, opp_overlap 2813826 GCTGGCTTGAATCAA GCCGG-GTTCAGGGC GCG GCCCTGAATGCCAGC ACCGCGTTCGTTCCG Pnap_2672 2815052 - 2813820 - | beta-ketoacyl synthase Pnap_2673 2815357 - 2815049 - | phosphopantetheine-binding Pnap_2674 2816685 - 2815354 - | FAD dependent oxidoreductase Pnap_2675 2817443 - 2816682 - | hypothetical protein Pnap_2676 2818504 - 2817440 - | chalcone/stilbene synthase domain-containing protein Pnap_2677 2819129 - 2818707 - | thioesterase superfamily protein Pnap_2678 2820126 - 2819161 - | hypothetical protein TERM 3388 2819240 - 2819220 - G 72 -3.9 -4.67353 | overlap 2819208 2819221 GCACGCAGGCAAAAA GTTGGGCCA GCG TGGGCCAAT GGCCGTCCCAGGCAA TERM 3389 2820469 - 2820459 - g 78 -6.8 -4.56597 | opp_overlap 2820436, overlap 2820460 GTCGTGCTCGAAAAA GGCT CCG AGCC CGGCGCGCACATCCT TERM 3390 2821034 - 2821008 - g 77 -13.6 -3.27298 | opp_overlap 2821015 2821028 CCGGCCAAGCACCAA GCCGGCCTGGTG GTG CACACGGCCGGC TGGCCGATGGACAGC TERM 3391 2821225 - 2821252 + G 70 -10.5 -3.57144 | gap 1 AGCGCATCGGCTACG GCGC-GCGGGCC ATCAC GGCCGGCGGCGC TTTAAGCCTGCCCAA Pnap_2679 2820297 - 2821982 + | electron-transferring-flavoprotein dehydrogenase TERM 3392 2822053 - 2822082 + T 86 -13.1 -3.62597 | gap 1, opp_overlap 2822059, overlap 2822054 2822059 TAGCAGTCATCCACC T-GAAAACCCTGGA ATT TCCAGGGTTTTCTA TTCTTGCCAACTGGA TERM 3393 2822054 - 2822080 + T 100 -18.2 -3.39288 | opp_overlap 2822059, overlap 2822053 2822059 AGCAGTCATCCACCT GAAAACCCTGGA ATT TCCAGGGTTTTC TATTCTTGCCAACTG TERM 3394 2822059 - 2822075 + T 100 -12.3 -4.79752 | opp_overlap 2822059, overlap 2822054 2822053 TCATCCACCTGAAAA CCCTGGA ATT TCCAGGG TTTTCTATTCTTGCC TERM 3395 2822075 - 2822059 - T 91 -12.3 -4.14739 | opp_overlap 2822059 2822054 2822053 TCATCCACCTGAAAA CCCTGGA ATT TCCAGGG TTTTCTATTCTTGCC Pnap_2680 2823571 - 2822147 - | sugar transferase Pnap_2681 2824352 - 2823564 - | response regulator receiver protein TERM 3396 2823688 - 2823703 + g 76 -6.2 -4.62069 | ATATTTAAAATACTT CCAATT TCCG AATTGG TTTTTCCCATGGCAA TERM 3397 2823879 - 2823850 - G 72 -4.2 -4.63218 | gap 1, opp_overlap 2823872 2823873 GCGCTGTCAATAAAA GGCATG-AGCACC TTGAT GGCGCCACTTGCC GACTCGGCAGGAATT TERM 3398 2824242 - 2824214 - G 76 -7.3 -4.25283 | ATCCTGCCAGCAAAA TGTCGTGCGGCAG GCA CTGCTGAACGTCA CCTTGCAGCCAATCC TERM 3399 2824643 - 2824624 - g 71 -9.2 -3.75153 | opp_overlap 2824629 2824630, overlap 2824603 2824598 CGCGCTGAACTGAAA CCCGGCGT GCGC ACGCTGGG TCAACGCGAGCGCAC Pnap_2682 2824582 - 2825103 + | hypothetical protein TERM 3400 2825666 - 2825629 - g 71 -11.3 -3.53012 | gap 1 CCGCCGCCTTTGAAA GCCTGATGCC-CGTCGAT GTG ATCGACCTGGCGCCAGGC AGGCAGCGCTACGGC TERM 3401 2825952 - 2825972 + G 74 -5.3 -4.56597 | overlap 2825953 ACCGGCGGCCGCTTC ACGGTCGCG GGC TGCGACTGC TTTTTGACCCGCAGC TERM 3402 2826227 - 2826201 - g 100 -11.4 -4.96848 | opp_overlap 2826210 2826211, overlap 2826203 TGGGCGATACAAAAA GTCCGGCGCACC GGC GGCGCGCGGGCC GGCGGCTTTCCGGGC Pnap_2683 2825394 - 2826548 + | glycine cleavage system T protein Pnap_2684 2826596 - 2826967 + | glycine cleavage system H protein TERM 3403 2827799 - 2827819 + G 70 -10.4 -3.60296 | TGGAATGCCGACATC GTGCTGGG CAGCA CCCAGCGC TTTGGCATGCCGATG TERM 3404 2828285 - 2828260 - g 81 -3.9 -5.00884 | gap 1, overlap 2828263 2828264 ATTTCGCTTAAAAAA TCACCTCG-GCG TGT CGCTCGACGAGA CCACCAGCCGCTCCG TERM 3405 2828401 - 2828415 + G 73 -7 -4.37886 | GATTCCGGCCGGGCT GCGCCG CAC CAGCGC TTTTCTCACGCATCC TERM 3406 2829667 - 2829655 - g 81 -10.5 -4.11216 | TCGCCAGGTCGAAAA CGGCC ACT GGCCG CAGGACAACAATCCG Pnap_2685 2826983 - 2829877 + | glycine dehydrogenase TERM 3407 2830302 - 2830276 - g 82 -2.9 -5.10497 | overlap 2830280 AAGGCATGCAAAAAA TCAAGGTCGGC GGCAA GGCGACGCTGA CCTGCCCGCCCGCCA Pnap_2686 2830005 - 2830406 + | peptidylprolyl isomerase, FKBP-type Pnap_2687 2831308 - 2830433 - | alpha/beta hydrolase fold TERM 3408 2830816 - 2830840 + g 86 -8.4 -4.56775 | opp_overlap 2830816 2830815 CGGCCTCGGGCAAAT GCCGCCAGGC ATTGA GCCGGACGGC TTTTTCCGGCGCGAT Pnap_2688 2833150 - 2831381 - | integral membrane sensor hybrid histidine kinase TERM 3409 2832325 - 2832297 - G 91 -9.6 -4.58395 | TCGATGCGCGAAAAA TCCAGCAAGGTG TTGAG CATCTCGCTGGA GGCCAGCGAGGCCGA Pnap_2689 2833824 - 2833150 - | two component LuxR family transcriptional regulator TERM 3410 2833492 - 2833469 - G 71 -5.2 -4.52589 | gap 1, opp_overlap 2833471, overlap 2833470 2833471 GCCTTGGAGACAAAA GCCGCTG-CGC CTC GCGACAACGCC AGGCGAATCGTTTCA TERM 3411 2833471 - 2833502 + g 70 -10 -3.57144 | opp_overlap 2833469 2833471 2833470 CTTGGAGACAAAAGC CGCTGCGCCTCGCG ACAA CGCCAGGCGAATCG TTTCAGGCTCGGCCG Pnap_2690 2835136 - 2833808 - | secreted hydrolase-like protein Pnap_2691 2835682 - 2835215 - | cytochrome c family protein TERM 3412 2835651 - 2835640 - G 74 -2.2 -4.88295 | gap 1, overlap 2835641 AAACAAAGCCAAAAA CCAGC ATC GC-GG CGGGCAGTAAAGGCG Pnap_2692 2836918 - 2835692 - | oxidoreductase, molybdopterin binding TERM 3413 2835888 - 2835863 - G 78 -6.7 -4.54727 | TTCGCGAAACGAAAA CCGCCCGAGGT CTTT ACCCAGTGCGG CCTCCCGCCACGGCT TERM 3414 2836367 - 2836390 + g 76 -5.9 -4.56597 | gap 1, opp_overlap 2836336, overlap 2836368 GTTGAATGCCACCTG CCGGGCG-CC GGCCA GGACGCCCGC TTTTTCAAGCACCGC TERM 3415 2837089 - 2837057 - H 81 -8.3 -4.26188 | opp_overlap 2837083, overlap 2837043 2837042 2837058 2837061 TGCATACAGTCAAAA TTGACCGCTTGCCAG CGG CCGGCAGGCGGTGAT CAAATCCTCGTCATT TERM 3416 2837088 - 2837058 - H 76 -11.8 -3.15231 | opp_overlap 2837083, overlap 2837043 2837042 2837057 2837061 GCATACAGTCAAAAT TGACCGCTTGCCAG CGG CCGGCAGGCGGTGA TCAAATCCTCGTCAT TERM 3417 2837085 - 2837061 - H 79 -13.5 -2.77118 | opp_overlap 2837083, overlap 2837043 2837042 2837058 2837057 TACAGTCAAAATTGA CCGCTTGCCAG CGG CCGGCAGGCGG TGATCAAATCCTCGT TERM 3418 2837900 - 2837886 - g 85 -10 -4.27316 | TCGCCGAATGGAAAA CACTGC TCG GCAGTG ACTGGAACAAAACCT Pnap_2693 2837186 - 2838295 + | periplasmic protein, function unknown TERM 3419 2838414 - 2838375 - g 75 -12.1 -3.5393 | gap 1, overlap 2838376 ATCACTTCCGTCAAA CGCCCCGCCAC-GGCCGA TGAAG TCGGCCAGTGGCAGGCTG GCGATGCCTGGCTGG Pnap_2694 2838345 - 2839193 + | molybdopterin dehydrogenase, FAD-binding TERM 3420 2841702 - 2841718 + G 77 -2.1 -5.00616 | overlap 2841704 CGGCCTTTGCCGACG CACCGCG CAG CGAGGTA TTTTTTGCCGACACC Pnap_2695 2839190 - 2841901 + | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding TERM 3421 2842358 - 2842310 - g 76 -10.9 -3.71848 | opp_overlap 2842337 CCGGGCCAGGAACAA GCGTACCGGGAATGGG-AGCGGC GCATT GCCGCCGCCCAGGCCCGGG-CGC CCGGCTTTCAGGGCT TERM 3422 2842836 - 2842874 + G 100 -13.1 -4.4727 | opp_overlap 2842825 TCAACCTGCTGGGCG CCGGCCTGATCGTTGCG CTTTA CGCAGCGAGCATGCTGG TTTTCTCGCTGTTGC Pnap_2696 2841905 - 2842894 + | antibiotic biosynthesis monooxygenase TERM 3423 2843957 - 2843912 - g 91 -9.7 -4.62069 | opp_overlap 2843914 GCTGCAGGTCAAAAA CAGCGCGGCCCACGGTGC-GG CTGTGC CCAGCAACG-AGGCAGCGCTG ACTTGATGCGGCCCA Pnap_2697 2842941 - 2843963 + | hypothetical protein TERM 3424 2844386 - 2844396 + G 76 -8.2 -4.13945 | GCCGCTGTCGTTCTT GCGC GCG GCGC TTTTGAACTGGACGT Pnap_2698 2843963 - 2844487 + | hypothetical protein TERM 3425 2844517 - 2844491 - T 74 -7.3 -4.11751 | gap 1, opp_overlap 2844497, overlap 2844493 ATCAATCCTTGAAAA CA-GGAAGCGGC CATG GCCGCTTGCATG TCTCCTTCAATCCGA TERM 3426 2844514 - 2844493 - T 74 -10.1 -3.6543 | opp_overlap 2844497, overlap 2844491 CAATCCTTGAAAACA GGAAGCGGC CATG GCCGCTTGC ATGTCTCCTTCAATC Pnap_2699 2845408 - 2844524 - | NUDIX hydrolase Pnap_2700 2847065 - 2845485 - | coenzyme A transferase TERM 3427 2845709 - 2845728 + g 74 -4.9 -4.56597 | CGCTGTAGGTGATCT GCTCGAC CTGTCT GACGAGC TTTTTCACCGCGCCC TERM 3428 2847399 - 2847409 + r 78 -2.4 -5.14965 | CGGTTCACGTCAAAC AGCG CCG CGCC TTTTTTCATCACCAT Pnap_2701 2848540 - 2847380 - | acyl-CoA dehydrogenase domain-containing protein TERM 3429 2848382 - 2848396 + g 86 -7.8 -4.72272 | overlap 2848356 2848355 2848351 GTTCATGGCGTACAG GCCGAG TTC CTTGGC TTTTTCATGAACAGC TERM 3430 2848755 - 2848725 - R 70 -6.7 -4.15044 | gap 1 TTGCGGCTCAAGAAA GGCGCGGCTG-ACC GCCA GGCACTGGCGCGCC CATTCGGTCTGGCCG Pnap_2702 2849531 - 2848704 - | xylose isomerase domain-containing protein TERM 3431 2849442 - 2849394 - G 78 -5.4 -4.72272 | gap 4, overlap 2849396 CTGGCCGATCAAAAA CTGCTG-CGG-C-GCGCCCGCCGC GTTGG GCAGCAGGCGCAGGCCGACAA-AG GCGTAACCCAGTTCC TERM 3432 2849460 - 2849442 - G 71 -8.8 -3.87815 | overlap 2849453 GCGCAGGCCGACAAA GGCGTAAC CCA GTTCCGCC GCCAGGCGCACGGCC Pnap_2703 2850172 - 2849546 - | NIPSNAP family protein TERM 3433 2850207 - 2850245 + r 74 -2.4 -5.06816 | opp_overlap 2850208 2850210, overlap 2850208 2850210 AATGCTATTAAAAAC AGAGCTGTTTGCGC CCGCCAGCTAT GCGCAAACGGCTGA TTTTTCTTGAAAACT Pnap_2704 2851976 - 2850228 - | putative FAD-binding dehydrogenase TERM 3434 2850979 - 2850949 - G 73 -8.3 -4.08945 | ATCAGGTGCGGAAAA TGG-GCCACGCTGCC ATC AGC-GCGCGGCACCA GCGACACCGGCGCGA TERM 3435 2851578 - 2851551 - G 74 -12 -3.53012 | gap 1 CCGGCGGCCGTCAAA GGGCGCGGCGC AGATCGA GCGCC-CGCCC GTGGCCGCGTCGGGC Pnap_2705 2852943 - 2852089 - | regulatory proteins, IclR TERM 3436 2852193 - 2852183 - G 77 -2.4 -5.0133 | overlap 2852185 GACTTGGTGAAAAAA GGCG ATG CGCT GCTGGCAGCGGCCAG TERM 3437 2853556 - 2853536 - g 74 -10.3 -3.79747 | opp_overlap 2853554 CGATTCACGACGAAA GCGCGGCGC GGC GCGACACGC TGATCAAGCGGCTCG Pnap_2706 2853055 - 2853849 + | shikimate dehydrogenase TERM 3438 2854132 - 2854152 + G 79 -8.1 -4.36914 | opp_overlap 2854115, overlap 2854105 CGTGGGCGAGCGCAC GCCGGCCGC GCT GCGCCAGGC TTTTCTGGACAACGG Pnap_2707 2853851 - 2855593 + | putative FAD-binding dehydrogenase Pnap_2708 2856690 - 2855737 - | AraC family transcriptional regulator TERM 3439 2855888 - 2855867 - G 72 -7.3 -4.14615 | overlap 2855869 2855885 AAAAACCGGCCAAAA TAGGCTTCG TCGG CAAAGCCCA GCGCATCGGCCAGCT TERM 3440 2857377 - 2857393 + G 71 -5.7 -4.36914 | CCGGCATGATCCGCA CCGCGCT GTC GGCCCGG TTTTATGAAGAACCC TERM 3441 2857463 - 2857423 - g 100 -14.7 -4.25104 | opp_overlap 2857442 2857444, overlap 2857407 CGGCTTCGAGCAAAA GCGCGC-CGCCGTCACGGC CAACC GCCGCGTCGGCGAGC-CGC AGGACATTGCCGATG Pnap_2709 2856788 - 2857618 + | short-chain dehydrogenase/reductase SDR TERM 3442 2858253 - 2858233 - g 71 -8.2 -3.92178 | ACCACCTGAAGGAAA TGGCGCTG TACCG CCGCGCCA TCAACGTGACCAGCG Pnap_2710 2857641 - 2859347 + | putative succinate dehydrogenase Pnap_2711 2859344 - 2859694 + | NIPSNAP family protein TERM 3443 2859766 - 2859732 - f 78 -2.2 -5.16572 | opp_overlap 2859733 2859743 2859750, overlap 2859733 2859743 2859750 ACCGAATTCAAAAAA TTGGAATTAAATTCAA TAC TTGAATACTATTCCAG TTTTATGTACCATTC Pnap_2712 2859808 - 2860668 + | short-chain dehydrogenase/reductase SDR Pnap_2713 2860727 - 2861578 + | inner-membrane translocator Pnap_2714 2861593 - 2862648 + | inner-membrane translocator TERM 3444 2863103 - 2863129 + G 74 -12.3 -3.44051 | gap 1 GCCGGCTCGATTTGG CGCTGGCGCTGG TGGG CCGGC-CCAGCG TTCTGCTGCTCGACG Pnap_2715 2862661 - 2863380 + | ABC transporter related Pnap_2716 2863377 - 2864081 + | ABC transporter related Pnap_2717 2864153 - 2865343 + | extracellular ligand-binding receptor TERM 3445 2865407 - 2865440 + G 71 -13.9 -2.53015 | gap 1, overlap 2865395 GACGCGGTGATCACG GGGCGG-CTGGTGGAC AGG GTTCACCAGGCCGCCG TCGATTCAGGCATCT Pnap_2718 2865353 - 2865766 + | 5-carboxymethyl-2-hydroxymuconate isomerase TERM 3446 2866322 - 2866307 - g 74 -11.8 -3.53012 | GGCCGGGGCGCGAAA CCGGCG TCAG CGCCGG CCCCAGCCTGGCCTG Pnap_2719 2865784 - 2866677 + | NAD-dependent epimerase/dehydratase Pnap_2720 2866831 - 2867658 + | short-chain dehydrogenase/reductase SDR Pnap_2721 2868296 - 2867949 - | low molecular weight phosphotyrosine protein phosphatase Pnap_2722 2868906 - 2868502 - | hypothetical protein Pnap_2723 2869303 - 2870148 + | GCN5-related N-acetyltransferase Pnap_2724 2871228 - 2870260 - | ferredoxin TERM 3447 2871142 - 2871121 - G 76 -9.3 -4.08216 | GGAGCCGGCGGAAAA GGCGGGCAG CGGT CCGCCCTCC TCGGCAACCAGCTCG Pnap_2725 2872303 - 2871239 - | Rieske (2Fe-2S) domain-containing protein Pnap_2726 2873055 - 2872348 - | ABC transporter related Pnap_2727 2873839 - 2873048 - | ABC transporter related TERM 3448 2873484 - 2873514 + g 71 -11.1 -3.53444 | gap 1 CATTTCGTTCCCAGC CCCCGGTGCTG-CG ACAC CGTCAGCGCCAGGG TTTGCAGCGGCGTGA Pnap_2728 2874804 - 2873836 - | inner-membrane translocator Pnap_2729 2875678 - 2874806 - | inner-membrane translocator TERM 3449 2875417 - 2875397 - G 76 -7.5 -4.2803 | opp_overlap 2875397, overlap 2875400 CAGGCCAATGGAAAA CAACACCTG GTC CAGGTGCGG CTTGTGGTACAGCGG TERM 3450 2875414 - 2875400 - G 85 -10 -4.25859 | opp_overlap 2875397, overlap 2875397 GCCAATGGAAAACAA CACCTG GTC CAGGTG CGGCTTGTGGTACAG TERM 3451 2875550 - 2875508 - G 93 -9.1 -4.81551 | gap 1 CAGGCACAGCAAAAA CGGC-ACGCCAAAGCGCTGC ATCA GCAGCACCGTGATGTAGCCG CCGGCCATGGCAAAG TERM 3452 2875577 - 2875565 - G 70 -10.5 -3.59979 | opp_overlap 2875551 2875551 GCCGGCCATGGCAAA GGCGC CGT GCGCC AGGTTGATGAAGTTC Pnap_2730 2876872 - 2875700 - | extracellular ligand-binding receptor TERM 3453 2876680 - 2876696 + g 72 -7.9 -4.10657 | ACTGGATTTTCTTGC CGGCCAC GGT GTCGCCG TTTTGCGCCATGTAC Pnap_2731 2877723 - 2876938 - | GntR family transcriptional regulator Pnap_2732 2878069 - 2878350 + | hypothetical protein Pnap_2733 2879285 - 2878437 - | protocatechuate 4,5-dioxygenase subunit beta TERM 3454 2878578 - 2878588 + g 83 -4.6 -5.00884 | opp_overlap 2878565 CAGCAGTTCAACGCC CTGG GTG CCGG TTTTTTCCACCAGCT Pnap_2734 2879680 - 2879315 - | protocatechuate 4,5-dioxygenase subunit alpha Pnap_2735 2879773 - 2880690 + | LysR family transcriptional regulator TERM 3455 2880867 - 2880877 + F 85 -2.4 -5.58454 | overlap 2880860 CTTTGGCAGTCCAGA CGGC CTG GGCG TTTTTTTGATCTCCC Pnap_2736 2881012 - 2881785 + | ferredoxin--NADP(+) reductase Pnap_2737 2882757 - 2881969 - | hypothetical protein TERM 3456 2882621 - 2882639 + g 76 -8.8 -4.15006 | opp_overlap 2882613 TCAGGAACGGCCAGG CCGAAGTC GAT GTCTTCGG TTTTGCGCTGCATGT Pnap_2738 2883850 - 2882777 - | hypothetical protein TERM 3457 2883247 - 2883225 - G 71 -4.7 -4.431 | opp_overlap 2883225 CACGCATCCAGAAAA CGCCGGGTG GTGTT CAGGCGGCG CTGTTTGCCTTGCAC Pnap_2739 2885317 - 2883968 - | integral membrane sensor signal transduction histidine kinase TERM 3458 2884734 - 2884764 + g 72 -13.8 -2.78384 | opp_overlap 2884717 GGCTGGTCGAAGTCG CCCGCGCCGAAGCG CAG CGCGCCGGCGCGGA TGTCGTCCAGCGGGC Pnap_2740 2886009 - 2885314 - | two component transcriptional regulator TERM 3459 2885741 - 2885798 + g 71 -8.5 -3.91084 | overlap 2885742 GCGCCCAGCTCCAGC CCGACGACCCGGTCCATCA-CCTCGCC CCGGGC GGTGAGCATGATG-ACCGGGATGTCGC TTTCCTTGCGGATCA Pnap_2741 2886578 - 2886108 - | hypothetical protein TERM 3460 2886359 - 2886387 + g 80 -4.6 -4.91109 | overlap 2886350 2886362 CGAGGCGCTGCGCAT GCAGCTTGT-CGCC CAA GGTGGACAGGC-GC TTTTTCTGGTCGGCG Pnap_2742 2887191 - 2886787 - | hypothetical protein Pnap_2743 2887270 - 2887953 + | HAD family hydrolase Pnap_2744 2889083 - 2888079 - | short chain dehydrogenase TERM 3461 2888740 - 2888726 - G 78 -3.4 -5.08824 | overlap 2888727 CGTTCAGGTAAAAAA TCGCCA CGT CGGCGC CTTCGCGCGCAAACA Pnap_2745 2890285 - 2889188 - | chorismate synthase TERM 3462 2891123 - 2891140 + G 100 -6.3 -5.40072 | CCAGGATCGAACGGC TGGTGTT GTTG AACGCCA TTTTTTTGCCAGACC Pnap_2746 2890549 - 2891454 + | helix-turn-helix, type 11 domain-containing protein Pnap_2747 2891628 - 2891936 + | hypothetical protein TERM 3463 2892217 - 2892233 + G 75 -3.7 -4.70583 | opp_overlap 2892217 ACTATACGTAATCAA TCATTCG TCA CCAATGA TTTTGTATTCATGGA TERM 3464 2892300 - 2892316 + G 72 -2.3 -4.75219 | GGAAGCTTTTGAAGG TATCG CGAAAGC CGATA TTTTATTGATGGTTC Pnap_2748 2891992 - 2892852 + | hypothetical protein TERM 3465 2892872 - 2892862 - f 74 -6.8 -4.33004 | opp_overlap 2892862, overlap 2892859 ATTTAATTAAAAGAA CCCA CAA TGGG TGAATTCCATGATTA Pnap_2749 2892985 - 2893512 + | hypothetical protein TERM 3466 2894664 - 2894649 - g 85 -6 -5.055 | TCAAGTCCGAAAAAA GCCAGC TCCA GCAGGC AGAAATGTTTGCAAT TERM 3467 2894742 - 2894732 - g 74 -5.4 -4.65895 | TTCGCTATCGAAAAA TTCC GGG GGAA CAGCAAGAAAATTTC TERM 3468 2894797 - 2894787 - g 83 -5.4 -5.00616 | TGCGTTTTGAAAAAA TTGC AAT GCAA CGCGTGCAAGAAGAA Pnap_2750 2893505 - 2895325 + | hypothetical protein Pnap_2751 2895322 - 2896971 + | GTP-binding protein, HSR1-related TERM 3469 2897112 - 2897096 - f 74 -7.9 -4.11394 | opp_overlap 2897093 2897088 2897096 2897098 ACGCGATGGCGAAAA CGTCGGC GAG GCCGATG TGGTTGTCTTTCATC TERM 3470 2897374 - 2897387 + G 100 -5.2 -5.4505 | opp_overlap 2897374, overlap 2897376 CTGCCAGGCATGGAA GCCC CGTCAC GGGC TTTTTTGTTGGACCG TERM 3471 2897376 - 2897386 + G 71 -8.2 -3.86307 | opp_overlap 2897374, overlap 2897374 GCCAGGCATGGAAGC CCCG TCA CGGG CTTTTTTGTTGGACC Pnap_2752 2897176 - 2898150 + | hypothetical protein Pnap_2753 2898212 - 2898601 + | hypothetical protein Pnap_2754 2898696 - 2899121 + | cupin 2 domain-containing protein Pnap_2755 2899793 - 2899137 - | glutathione S-transferase-like protein TERM 3472 2900831 - 2900817 - g 77 -4.2 -4.93365 | GGCGACAAGGAAAAA GCCGAT GTG ATCCGC AAGTTTTACGATGAA Pnap_2756 2899971 - 2901200 + | polyhydroxyalkanoate depolymerase, intracellular TERM 3473 2901234 - 2901212 - T 78 -6.9 -4.62054 | gap 1, opp_overlap 2901229, overlap 2901213 GTAAGGAAATGAAAA TGGGCGGCGC TGCG GC-CCGCCCT GCGCATCAATCGCGC TERM 3474 2901233 - 2901213 - T 73 -10.4 -3.36148 | gap 1, opp_overlap 2901229, overlap 2901212 TAAGGAAATGAAAAT GGGCGGCGC TGCG GC-CCGCCC TGCGCATCAATCGCG Pnap_2757 2901695 - 2901240 - | CBS domain-containing protein TERM 3475 2901892 - 2901906 + G 84 -2.1 -5.31275 | ATGCGGCCGCGTGCC GTTGA AAAAA TCAGC TTTTTTGTACTGGAG Pnap_2758 2901877 - 2903232 + | O-acetylhomoserine aminocarboxypropyltransferase Pnap_2759 2903232 - 2904050 + | alpha/beta hydrolase fold Pnap_2760 2905004 - 2904096 - | LysR family transcriptional regulator TERM 3476 2904283 - 2904257 - G 88 -8.6 -4.81249 | CCCGAAAGTGAAAAA GCGTCAGCGCAG GCA CGACGCTGATGC CAAGCCCGGCCTCGA Pnap_2761 2905126 - 2906502 + | hypothetical protein Pnap_2762 2906499 - 2906864 + | hypothetical protein Pnap_2763 2906898 - 2907866 + | hypothetical protein TERM 3477 2907872 - 2907893 + T 72 -11.5 -3.14564 | AGCCGATTGACATCC TCCCACGCC TGAA GGCGGGGGA TTCCTACGGCGCTAA Pnap_2764 2909140 - 2907905 - | IS605 family transposase OrfB TERM 3478 2909213 - 2909232 + r 86 -10.6 -4.07687 | opp_overlap 2909228 GTCCGCGCTCTGCAT CCCCGCCC TGAA GGACGGGG TTTTCCGCGCAAGAT Pnap_2765 2910275 - 2909418 - | silent information regulator protein Sir2 TERM 3479 2910337 - 2910356 + r 72 -12.2 -2.74817 | opp_overlap 2910341, overlap 2910336 2910333 GGCAAGGTGCGTCAA GCCATCCT GGCG AGGATGGC GTTCATTTCATCCTT Pnap_2766 2910626 - 2910333 - | hypothetical protein Pnap_2767 2912042 - 2910657 - | FAD linked oxidase domain-containing protein Pnap_2768 2912594 - 2912202 - | hypothetical protein Pnap_2769 2913893 - 2912679 - | putative ribonuclease BN TERM 3480 2912707 - 2912718 + g 72 -7.2 -4.15453 | overlap 2912706 CGCAGGTGCAGCATG CGCC AACG GGCG TTTTCCCATAAATTA TERM 3481 2913052 - 2913010 - G 81 -13.4 -3.57263 | gap 1 ATGGCCAGCTGGAAA TGCCAGCCGTGCGCGCTGC CGCGAC GCGGCACGC-CGGCCAGCA GGCTGGGCAGCCAGG TERM 3482 2913378 - 2913342 - G 88 -8.5 -4.72986 | overlap 2913344 CACGTCCAGCAAAAA CCGCAGGCTGAAGGGCA AGG CGCCCACCAGGCCGCTG GAGGCCGACACCACA TERM 3483 2913720 - 2913705 - G 74 -10.4 -3.71687 | overlap 2913716 GGAAAACATCGGAAA GGCGGT GAAC ACCGCC AGCGCCACGGTAAAA TERM 3484 2914159 - 2914145 - g 71 -12.8 -3.06796 | CTGTACTTCACCGAA GGCGCG GTG CGCGCC TGGAGCGACCGCGCG Pnap_2770 2913914 - 2914306 + | membrane protein-like protein Pnap_2771 2914303 - 2915811 + | FAD linked oxidase domain-containing protein Pnap_2772 2915860 - 2916690 + | thymidylate synthase Pnap_2773 2916690 - 2917190 + | dihydrofolate reductase TERM 3485 2918130 - 2918106 - g 78 -9.9 -4.08216 | opp_overlap 2918106, overlap 2918107 TGATGCCCTTGAAAA CCGCTGCCGAA AAG CTCGGCCGCGA TGATTTCTCCACCCT Pnap_2774 2917187 - 2918221 + | 2-nitropropane dioxygenase, NPD TERM 3486 2918301 - 2918311 + F 70 -5.4 -4.41548 | overlap 2918286 TGGATATTCAGCGGG CTGA AAT TCAG TTTTGTCACCTATCA Pnap_2775 2918347 - 2918928 + | putative transmembrane protein Pnap_2776 2918973 - 2919755 + | exodeoxyribonuclease III Xth TERM 3487 2919798 - 2919761 - T 100 -7 -5.60993 | gap 1, opp_overlap 2919762 2919764, overlap 2919762 2919764 TTTGCTATAAAAAAA GTAGCTGCCTGCGCAGG TGCAG CCTGCGCAAAC-GCCAT TATTTACTCAAGATT TERM 3488 2919797 - 2919762 - T 83 -10.5 -3.95873 | gap 1, opp_overlap 2919762 2919764, overlap 2919761 2919764 TTGCTATAAAAAAAG TAGCTGCCTGCGCAGG TGCAG CCTGCGCAAAC-GCCA TTATTTACTCAAGAT TERM 3489 2919795 - 2919764 - T 74 -10.9 -3.56036 | gap 1, opp_overlap 2919764 2919762, overlap 2919762 2919761 GCTATAAAAAAAGTA GCTGCCTGCGCAGG TGCAG CCTGCGCAAAC-GC CATTATTTACTCAAG Pnap_2777 2921352 - 2919802 - | nitrogen metabolism transcriptional regulator, NtrC, Fis family TERM 3490 2920136 - 2920148 + g 85 -5.5 -5.08824 | CCGGTCCGGTCCTGC CTGAG CGG CTCGG TTTTTTCGGTCAGGG TERM 3491 2921289 - 2921264 - G 70 -10.3 -3.55444 | opp_overlap 2921278 CGCGGATTGGTGAAA CTGCGCGTTGG CAGG CCTTCGCGCAG CAGGGCTTTTTCCAG TERM 3492 2921278 - 2921295 + g 72 -4.1 -4.56597 | gap 1, opp_overlap 2921264 ACTGCGCGTTGGCAG GCCTTCGC GCA GC-AGGGC TTTTTCCAGAACAAA Pnap_2778 2922508 - 2921411 - | signal transduction histidine kinase, nitrogen specific, NtrB TERM 3493 2921862 - 2921845 - G 70 -12.7 -2.82742 | overlap 2921831 2921843 2921842 ACTCGGCCAGAATGA GCGAGCG CACC CGCTCGC AGACCTCGTGGATGT Pnap_2779 2923049 - 2922531 - | putative signal peptide protein TERM 3494 2923199 - 2923182 - R 100 -11.3 -5.67063 | opp_overlap 2923182 TCCACCATAAAAAAA GGATGGC AGAT GCCATCC TTTTTTTTCAGCCGC TERM 3495 2923182 - 2923199 + r 100 -11.3 -5.75342 | opp_overlap 2923182 TCCACCATAAAAAAA GGATGGC AGAT GCCATCC TTTTTTTTCAGCCGC Pnap_2780 2924662 - 2923247 - | glutamine synthetase, type I Pnap_2781 2925800 - 2924892 - | molybdopterin binding domain-containing protein Pnap_2782 2926726 - 2925818 - | putative transmembrane protein Pnap_2783 2927699 - 2926734 - | hypothetical protein Pnap_2784 2928586 - 2927705 - | polysaccharide deacetylase TERM 3496 2927844 - 2927822 - GR 81 -12.6 -3.14881 | opp_overlap 2927835 CAAGCCGGTGATCAA GGGCTCCAGC ACG GCCGGCGCCC ACGGCTCCTTGCGCG TERM 3497 2927892 - 2927914 + gr 70 -6.9 -4.15044 | opp_overlap 2927892, overlap 2927893 2927902 GCGACCAGGACATCA CCGCTGCGG ATGCC CTGCAGCGC TTTGTTCAGCAGCGC TERM 3498 2927992 - 2927972 - GR 87 -8.1 -4.65895 | overlap 2927973 CTCGTCACCCAAAAA GCCGGCAGG CGA CCAGCCCGC ATGCGCATAGCCGCA Pnap_2785 2929577 - 2928552 - | YVTN beta-propeller repeat-containing protein Pnap_2786 2930451 - 2929717 - | pseudouridine synthase TERM 3499 2930499 - 2930471 - R 100 -17.6 -5.27335 | opp_overlap 2930471 TTTTCCAAAGAAAAA GGCCGTTTACTG GACTT CAGTAAACGGCC TTTGACAGTTATGGT TERM 3500 2930471 - 2930499 + r 100 -18.3 -3.62859 | opp_overlap 2930471 TTTTCCAAAGAAAAA GGCCGTTTACTGG ACT TCAGTAAACGGCC TTTGACAGTTATGGT Pnap_2787 2931578 - 2930913 - | phosphoglycolate phosphatase Pnap_2788 2932340 - 2931624 - | 3-demethylubiquinone-9 3-methyltransferase TERM 3501 2932385 - 2932370 - R 100 -11.8 -5.50499 | opp_overlap 2932370 TGAGACGTAAAAAAA CCGCGC CTTG GCGCGG TTTTTTTACTGATCC TERM 3502 2932370 - 2932385 + r 100 -11.8 -5.55664 | opp_overlap 2932370 TGAGACGTAAAAAAA CCGCGC CTTG GCGCGG TTTTTTTACTGATCC Pnap_2789 2933041 - 2932409 - | OmpA/MotB domain-containing protein TERM 3503 2932464 - 2932476 + g 78 -4.7 -4.78237 | overlap 2932460 CGACGGTTTTTCGCA CGGCC TTC GGCGG TTTTGTTGTCGGCTA TERM 3504 2935155 - 2935188 + G 82 -14.5 -3.33315 | gap 1, opp_overlap 2935146, overlap 2935156 AAGGTATGGGAAGTG CCGGCGGGCTCACGCG GCT CGCGTG-GCCGGCCGA TTGTCAACATGTTCC TERM 3505 2935156 - 2935187 + G 86 -18 -2.59668 | gap 1, opp_overlap 2935146, overlap 2935155 AGGTATGGGAAGTGC CGGCGGGCTCACGCG GCT CGCGTG-GCCGGCCG ATTGTCAACATGTTC TERM 3506 2935353 - 2935318 - g 74 -4.7 -4.64676 | gap 1, opp_overlap 2935318 2935342 GTACCGTCAAGAAAA CGCCCCTG-GACGATT TCAAC AACCCCCGCAAGGGCG GCATTATTGCCGTGG Pnap_2790 2933298 - 2935967 + | DNA gyrase subunit A TERM 3507 2936328 - 2936344 + G 78 -6.5 -4.62336 | opp_overlap 2936327 2936328, overlap 2936327 TTACGCTGGAAGAAC TGCAGCA GAT TGCAGCA TTTTTCGAATCGCCT Pnap_2791 2935964 - 2936536 + | hypothetical protein TERM 3508 2937148 - 2937132 - g 78 -3.5 -4.96848 | opp_overlap 2937140, overlap 2937133 2937134 CGGCGCACAGAAAAA CCTCGGC CCT GCCGGCG TGACACTGGTGGTGG Pnap_2792 2936533 - 2937639 + | phosphoserine aminotransferase TERM 3509 2937766 - 2937755 - g 78 -3.6 -5.07567 | GGAGAGGTCAAAAAA CGCG AAGG CACG CCTTTTTTCCGGCCT TERM 3510 2937948 - 2937958 + G 77 -2.4 -5.00616 | overlap 2937943 2937942 CCTTCAGCGAGCAGG CCGC CCT GCAG TTTTTTGGCAACAGC Pnap_2793 2937641 - 2938723 + | chorismate mutase TERM 3511 2939623 - 2939638 + G 78 -11.8 -3.72576 | opp_overlap 2939621 2939611 CAAGCCAGTGAAACG CGCGCC AACT GGCGCG TTTCCTCGCACAAAG Pnap_2794 2938786 - 2939664 + | prephenate dehydrogenase Pnap_2795 2939676 - 2941679 + | bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase TERM 3512 2941818 - 2941799 - f 83 -7.2 -4.60889 | AAGCAGCCCTAAAAA CAATAGCA ATTT CGCTATTG GAAACCTGTTGTGTG TERM 3513 2942617 - 2942605 - g 80 -4.7 -4.89852 | CGACACCGAGAAAAA CCGCG TGT CGCTG GGTCTGAAGCAAATG rpsA 2941847 - 2943532 + | 30S ribosomal protein S1 Pnap_2797 2943607 - 2943921 + | integration host factor, beta subunit TERM 3514 2943997 - 2944015 + G 100 -11 -5.82388 | GTGAAATACCTGATG TGGCTGCT CAA GGCAGCCA TTTTTTTTACGCTTT Pnap_2798 2943982 - 2944269 + | hypothetical protein Pnap_2799 2944259 - 2945404 + | hypothetical protein Pnap_2800 2945424 - 2946371 + | rfaE bifunctional protein Pnap_2801 2946405 - 2947412 + | ADP-L-glycero-D-manno-heptose-6-epimerase Pnap_2802 2947555 - 2947914 + | hypothetical protein TERM 3515 2947950 - 2947935 - T 100 -10.4 -5.31877 | opp_overlap 2947935 ATCGACCATAAAAAA CCCGCT TGCG AGCGGG TTTTTTTACTTGGAG TERM 3516 2947935 - 2947950 + T 100 -10.4 -5.63103 | opp_overlap 2947935 ATCGACCATAAAAAA CCCGCT TGCG AGCGGG TTTTTTTACTTGGAG fabG 2948723 - 2947986 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 3517 2948179 - 2948205 + g 74 -13.1 -3.35867 | gap 1 GTGCCGATGTAGCCT GGGC-TGACGGT GTTC ACCGTCACGCCC TTGCTTGCCACTTCC Pnap_2804 2950016 - 2948838 - | acetyl-CoA acetyltransferase TERM 3518 2949329 - 2949346 + g 72 -7.7 -4.20696 | gap 1, overlap 2949315 CGGGGCGCAAGCCTG CCAG-GCC TTC GGCGCTGG TTTTACGGTTGATGA Pnap_2805 2951892 - 2950129 - | poly(R)-hydroxyalkanoic acid synthase, class I TERM 3519 2951284 - 2951263 - G 75 -11.6 -3.5394 | opp_overlap 2951269 AAATTCGTTTTCAAA CACCACCG CGCCTT CGGTGGTG GCGACGTTTTTGCCG TERM 3520 2951269 - 2951290 + g 72 -4.3 -4.59853 | gap 1, opp_overlap 2951263 GTTTTCAAACACCAC CG-CGCCTTC GGT GGTGGCGACG TTTTTGCCGACTTCA TERM 3521 2951386 - 2951403 + g 85 -3.3 -5.27923 | CCTGGCAATGCTTTC GCCTTTG GTTT CGATGGC TTTTTTCTGGGCTTC TERM 3522 2951461 - 2951495 + g 100 -14.2 -4.15854 | overlap 2951466 2951485 CGCTGAAGCCGCCAT CCACTGCTCGACTGCG AAA CGCAGGCGAGCCTTGG TTTTGGCGTCGCTTT TERM 3523 2951466 - 2951490 + g 78 -15.7 -2.80537 | overlap 2951461 2951485 AAGCCGCCATCCACT GCTCGACTGCG AAA CGCAGGCGAGC CTTGGTTTTGGCGTC Pnap_2806 2953072 - 2952242 - | hypothetical protein Pnap_2807 2953725 - 2953075 - | maleylacetoacetate isomerase Pnap_2808 2954397 - 2953780 - | hypothetical protein Pnap_2809 2955315 - 2954452 - | hypothetical protein Pnap_2810 2955869 - 2955312 - | hypothetical protein TERM 3524 2955693 - 2955665 - G 77 -13.1 -3.54424 | overlap 2955645 2955667 CCGCATGCGCCGAAA GACGGCCCTGCGA GAG TTGCAGGGCCGTG CGCTTGAGGGGCGCA TERM 3525 2955691 - 2955667 - G 84 -15.7 -3.35046 | overlap 2955645 2955665 GCATGCGCCGAAAGA CGGCCCTGCGA GAG TTGCAGGGCCG TGCGCTTGAGGGGCG Pnap_2811 2956662 - 2955913 - | ABC-type phosphate/phosphonate transport system periplasmic component TERM 3526 2956151 - 2956134 - G 76 -12.7 -3.40403 | TGCTTTCCACCAGAA CGCGCAG CTGG CTGCGCG TCATGCGGGTGAGCG TERM 3527 2956353 - 2956369 + g 70 -8 -4.09864 | overlap 2956323 CAATGCGGCTGCCGG GCTGGA TGTCC TCCAGC TTTTGCAGACTGGAT Pnap_2812 2957159 - 2956659 - | putative PAS/PAC sensor protein Pnap_2813 2957532 - 2957170 - | roadblock/LC7 family protein TERM 3528 2957653 - 2957664 + H 74 -7.2 -4.09864 | GTTAGCGCAAGTTCC CCCG AAAA CGGG TTTTGGACGGTGCAT Pnap_2814 2957772 - 2958074 + | antibiotic biosynthesis monooxygenase TERM 3529 2958187 - 2958206 + G 84 -10.8 -4.18018 | CCCAGATGCAGAGCC GGCTGAAA AAGC TTTCAGCC TTTTCAATCCAGGCA TERM 3530 2958339 - 2958293 - g 81 -4.3 -5.10077 | gap 2, opp_overlap 2958323, overlap 2958295 2958307 AAATAGCTTAAAAAA CCCCGAAGCAACTACGGCCTGGC CAA GCC-GGCCG-ATTCGCATCCTGG TCGGCTTTCCCGGAG TERM 3531 2958617 - 2958650 + G 85 -5.7 -5.00616 | overlap 2958618 2958619 CGCACCGCTGATGCT GGTGGCCCCGGCGAG TCTG CCCGGCGGGGCCGAA TTTTTTGCAGCGGCC Pnap_2815 2958159 - 2959199 + | hypothetical protein TERM 3532 2959625 - 2959612 - g 93 -8.1 -5.21709 | opp_overlap 2959611 GGCGAGATGAAAAAA CAGGG CCGC CCCTG GTGCATTGGCAAGGC Pnap_2816 2959237 - 2959932 + | fumarylacetoacetate (FAA) hydrolase TERM 3533 2960012 - 2960028 + F 77 -8 -4.20074 | GATTTAGGACTTTTG CGCATG ATAGC CATGCG TTTTAAGCTATATTT Pnap_2817 2960064 - 2960669 + | NUDIX hydrolase TERM 3534 2961610 - 2961598 - g 81 -4.1 -5.05113 | CCCAGATAAAGAAAA TCAAG CTG CTCGA CGTGGTGCTTGATGG rdgC 2960751 - 2961806 + | recombination associated protein Pnap_2819 2961933 - 2962265 + | hypothetical protein Pnap_2820 2963691 - 2962333 - | sigma-54 dependent trancsriptional regulator TERM 3535 2963389 - 2963366 - G 82 -3 -5.14563 | gap 1, overlap 2963367 2963368 TTCTCGACGAAAAAA GCCTGTTCGCC ATG GGCGTCCAG-C AGCGGGGCCAGCTCG TERM 3536 2964557 - 2964611 + G 93 -7.7 -5.0133 | opp_overlap 2964538, overlap 2964558 2964566 GCTGTTCGCCGGCCA TGGGCGCC-GCGCCCGCGCCGTCAGCA CCG TGCTGGAGCAGCGG-CGCTGGCATCCG TTTTTTGCCGGCCTG Pnap_2821 2964057 - 2964704 + | beta-lactamase domain-containing protein Pnap_2822 2964742 - 2966166 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3537 2966233 - 2966270 + F 100 -12.9 -4.54821 | gap 1, opp_overlap 2966235 2966265, overlap 2966234 2966235 TTGCTACTGATTTAA TA-GCTACTTGCGCATAC TGT GTATGCGCAAGAGGCATA TTTTATGCTTGAAAT TERM 3538 2966234 - 2966268 + F 93 -13.6 -3.8823 | opp_overlap 2966235 2966265, overlap 2966233 2966235 TGCTACTGATTTAAT AGCTACTTGCGCATAC TGT GTATGCGCAAGAGGCA TATTTTATGCTTGAA TERM 3539 2966267 - 2966235 - f 91 -14.9 -3.09878 | opp_overlap 2966235 2966234 2966233, overlap 2966265 GCTACTGATTTAATA GCTACTTGCGCATAC TGT GTATGCGCAAGAGGC ATATTTTATGCTTGA TERM 3540 2966235 - 2966267 + F 93 -17.1 -2.92215 | opp_overlap 2966235 2966265, overlap 2966234 2966233 GCTACTGATTTAATA GCTACTTGCGCATAC TGT GTATGCGCAAGAGGC ATATTTTATGCTTGA Pnap_2823 2966499 - 2967395 + | dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein Pnap_2824 2967509 - 2968369 + | beta-lactamase domain-containing protein TERM 3541 2968430 - 2968405 - T 77 -8.3 -4.11484 | gap 1, overlap 2968387 CTCAAGCGCTGAAAA TGGGCGC-ACGA AAC TTGTCGCGCCCA TCTCACCTTGAGCAG Pnap_2825 2969440 - 2968451 - | cytochrome c, class I TERM 3542 2968829 - 2968876 + g 80 -6.2 -4.77036 | gap 2 CGTGGCGCTGCCCGG TGCGCCGGCCCGCAC-GC-CCG CACCTT CGGCGCCGTGGCAGCTGGCGCA TTTTTCCTGGTAAAC Pnap_2826 2969902 - 2969564 - | regulatory protein, ArsR TERM 3543 2970540 - 2970556 + G 100 -7.9 -5.31275 | CGCAGGCCGGCGTGG CCCGGAC CCA GTCGGGG TTTTTTGTGGTCAAC TERM 3544 2970859 - 2970871 + G 70 -10.5 -3.55071 | opp_overlap 2970853 TGGCATCAAGGGCGT GGCGC CCG GCGCC TTTGCCCGCATCTGG Pnap_2827 2970068 - 2971126 + | RND family efflux transporter MFP subunit TERM 3545 2971214 - 2971230 + G 72 -4.3 -4.63527 | overlap 2971205 GCTGCTGGCGCTGGT TGCCTTG CTG CTGGGCA TTTTTGCGGTGCTGG TERM 3546 2973272 - 2973303 + G 76 -5.8 -4.56597 | gap 1, opp_overlap 2973251 2973250, overlap 2973273 CCCGGACGCCGAAGG CCGC-CGCACGGT AGCCAAA GCCGTGCGCGCGA TTTTTGAGAAAACCG TERM 3547 2974187 - 2974205 + G 74 -10.2 -3.75292 | CATGCTGACCGGGCT GGCGGCCA TGC TGGGCGCC TTCTTCATCCTCGAT Pnap_2828 2971128 - 2974367 + | acriflavin resistance protein Pnap_2829 2974371 - 2974580 + | hypothetical protein TERM 3548 2974620 - 2974636 + G 78 -3.5 -5.00616 | CCATTTTCTGGCCGC CGCCCTG ACG CTGTGCG TTTTTTCAGCCCAGG Pnap_2830 2974594 - 2975961 + | TolC family type I secretion outer membrane protein Pnap_2831 2975999 - 2977270 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 3549 2977403 - 2977372 - g 77 -13.8 -3.28712 | gap 1 CCCTTTGCCCGACAA CGCCCTGGTGATCGA CGT TCGCTCACCAGG-CG AATATGCCTCGGGCC TERM 3550 2977485 - 2977467 - g 70 -11.7 -3.12895 | overlap 2977465 GCTTTGAGCAAGAGA TCGGGCG TGTGG CGCCCGA CAAAAGCGTTCCAGT Pnap_2832 2977310 - 2977639 + | rhodanese domain-containing protein Pnap_2833 2977659 - 2978135 + | OsmC family protein Pnap_2834 2978132 - 2978512 + | rhodanese domain-containing protein Pnap_2835 2979464 - 2978727 - | ABC transporter related Pnap_2836 2980654 - 2979461 - | hypothetical protein TERM 3551 2980664 - 2980676 + r 76 -10.5 -3.71649 | overlap 2980671 GATCATGGAGTGGCT CCGGC GGG GCCGG TTTGGCCTTTCGCCA Pnap_2837 2981871 - 2980651 - | RND family efflux transporter MFP subunit TERM 3552 2980871 - 2980919 + g 70 -10.2 -3.53811 | gap 1 CAGACGCCGGTCTGG CCCTGCTGGCGCTGGATGCTGGC GTTG GGCAGCAGC-AGCGACACCGGGG TTTCGGGCAGCTGCA Pnap_2838 2982428 - 2981868 - | hypothetical protein Pnap_2839 2983362 - 2982442 - | cation diffusion facilitator family transporter TERM 3553 2983338 - 2983385 + g 86 -18 -2.52543 | gap 3, overlap 2983333 CGGGGGCATGGCTGT GCCCATGATCG-TGGGC-AGCGC TCATT GCGCTTGCCCAGCG-TCATGGGC TGACTTGCGGCGCAT Pnap_2840 2983959 - 2983540 - | hypothetical protein TERM 3554 2983884 - 2983909 + g 73 -8.9 -3.97947 | gap 1 AGTGCCCGGACCTGC GCC-CACTGCGC TTC GCGCGGAGCGGC TTTCTCATGAATCGC TERM 3555 2984010 - 2983966 - R 81 -12.8 -3.08679 | gap 1, opp_overlap 2983966, overlap 2983969 CTTGCGCATCGAACA CCAGCCAGGCGCAGG-TTTCG TTGA CGACGTCCTGCGCCTGGCCGC CAACGATGCGCAGAT TERM 3556 2984007 - 2983969 - R 83 -15.3 -2.75992 | gap 1, opp_overlap 2983966, overlap 2983966 GCGCATCGAACACCA GCCAGGCGCAGG-TTTCG TTGA CGACGTCCTGCGCCTGGC CGCCAACGATGCGCA TERM 3557 2984252 - 2984232 - R 80 -10.4 -3.85698 | gap 1, opp_overlap 2984231 CGGGGCCTTCATAAA CCGG-GGCG AAGC CGCCGCCGG GTGTTCGAAAATTGG Pnap_2842 2985534 - 2984212 - | hypothetical protein TERM 3558 2985012 - 2984976 - G 87 -17.4 -2.94099 | gap 1, overlap 2984995 GCGCGTGACCAGACA GCGCCCATTCGTGGCGA AACA TCGCCACGA-TGCGCGC TTCCAGCGCCTCGGC TERM 3559 2985207 - 2985181 - G 83 -7.8 -4.62069 | overlap 2985183 2985184 GTCGTAGCCGAAAAA TACGCCCAGGGC ACC GCCCGGGCCGTG CCGCGCGATGGCGGG TERM 3560 2985205 - 2985183 - G 76 -10.4 -3.92746 | overlap 2985181 2985184 CGTAGCCGAAAAATA CGCCCAGGGC ACC GCCCGGGCCG TGCCGCGCGATGGCG Pnap_2843 2986216 - 2985977 - | glutaredoxin TERM 3561 2986094 - 2986111 + g 72 -2.6 -4.70879 | GCCGTAGCCCATGAT GTCGCG CAACTC CTCGAC TTTTTCAAGTTTGAC Pnap_2844 2987320 - 2986274 - | permease TERM 3562 2987023 - 2986998 - G 70 -10.4 -3.62591 | overlap 2987013 GTCACAATGCCCAAA GACGCGGCCA TCACAT TGGCCACGCC CGCGCTGCGCCCGGC TERM 3563 2987188 - 2987147 - G 75 -4.4 -4.8048 | gap 2, overlap 2987148 GTCGTAGATGAAAAA CTGC-AGTGCGCCGC-CCAG GTGG CTGGCGCGGTCCACCGGCAA GGCCGCGACCAAGGC TERM 3564 2987289 - 2987269 - G 77 -2.5 -5.03945 | gap 1, overlap 2987270 2987272 CAACAACCAGAAAAA GTACCGGC TGACGT GCCGGC-C AGCGTTGAAGGGATG Pnap_2845 2988013 - 2987489 - | ECF subfamily RNA polymerase sigma-24 factor TERM 3565 2987896 - 2987876 - G 73 -6.7 -4.2828 | GTGCACGGAGCAAAA GCGCTCCCC CTG GCGCAGCGC CTTGAGAAACAGATC TERM 3566 2988333 - 2988300 - g 71 -5.9 -4.34402 | opp_overlap 2988310 2988331, overlap 2988301 2988303 TGCTCGACACCAAAA GGATGCTCGACGACG CGCG CATCACCGAGCAGCG CGCGGCACTTTGCGC Pnap_2846 2988235 - 2988486 + | hypothetical protein TERM 3567 2988717 - 2988678 - T 89 -16.6 -2.51133 | opp_overlap 2988684, overlap 2988684 CACTGATTTACCAAT GAAAAAGGCCGCTAGG TGTATGTC CCTAGCGGCCTTTGTC TCTAACCGTGGTCGG TERM 3568 2988684 - 2988711 + T 100 -14.2 -4.128 | opp_overlap 2988678 2988684 TTTACCAATGAAAAA GGCCGCTAGG TGTATGTC CCTAGCGGCC TTTGTCTCTAACCGT TERM 3569 2988711 - 2988684 - T 100 -14.2 -4.90266 | opp_overlap 2988684, overlap 2988678 TTTACCAATGAAAAA GGCCGCTAGG TGTATGTC CCTAGCGGCC TTTGTCTCTAACCGT Pnap_2847 2989326 - 2988838 - | MerR family transcriptional regulator Pnap_2848 2989763 - 2989392 - | integration host factor, alpha subunit pheT 2992240 - 2989814 - | phenylalanyl-tRNA synthetase subunit beta TERM 3570 2990384 - 2990366 - G 83 -5.3 -5.09426 | gap 1 TTTAATGTCAAAAAA GTCCG-CA GCCT TGTCGGAC TGACTCCAATGCAAT Pnap_2850 2993339 - 2992275 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 3571 2993063 - 2993075 + g 83 -7.7 -4.59773 | TCACATCAAGGGCTT CAGCT TTG AGCTG TTTTTCAAGCTCGGC TERM 3572 2993460 - 2993433 - R 100 -12 -4.75404 | opp_overlap 2993433, overlap 2993421 AAAGGCCATGAAAAA GGGCCAGAGCCT TTTC AAGCTCCAGCCC TTTATTTTCTTGCGC TERM 3573 2993433 - 2993460 + r 80 -5.4 -4.87892 | opp_overlap 2993421 2993433 AAAGGCCATGAAAAA GGGCCAGAGCCT TTTC AAGCTCCAGCCC TTTATTTTCTTGCGC rplT 2993872 - 2993513 - | 50S ribosomal protein L20 Pnap_2852 2994100 - 2993897 - | ribosomal protein L35 Pnap_2853 2994860 - 2994336 - | translation initiation factor IF-3 Pnap_2854 2996928 - 2995021 - | threonyl-tRNA synthetase TERM 3574 2996002 - 2996012 + g 77 -2.4 -5.00616 | GTCGCGGTACTTGTC CCAG TGA CCGG TTTTTTCCCACAGCG TERM 3575 2996800 - 2996785 - G 74 -9 -3.96148 | opp_overlap 2996785 TTGGCTGATGAGAAA GCTGGT ATCA ACCAGC TTTCCATCGACCTTG TERM 3576 2996972 - 2996955 - R 100 -9.8 -6.01725 | opp_overlap 2996955 AACAAAAATAAAAAA GCGCGG ACCAAG CCGCGC TTTGCAATTGGAAGC TERM 3577 2996955 - 2996972 + r 74 -9.8 -3.66178 | opp_overlap 2996955 AACAAAAATAAAAAA GCGCGG ACCAAG CCGCGC TTTGCAATTGGAAGC Pnap_2855 2998349 - 2997030 - | isocitrate lyase TERM 3578 2997330 - 2997354 + g 86 -5 -5.10208 | gap 1, overlap 2997330 GAGTTCTTTCTGGAA CTTGG-CGATG GTGG CGTCGTCCAGG TTTTTCTTCCAGTTG Pnap_2857 2999048 - 2998746 - | hypothetical protein TERM 3579 2999193 - 2999213 + G 83 -15.5 -3.14211 | CAACAGGTGCCCCGG CTCACGCTG CGC CAGCGTGAG TTGCTCAAGAAGCGT TERM 3580 2999284 - 2999256 - g 80 -5.8 -4.78107 | overlap 2999258 GATGAGCAGCAAAAA GGGCTGGCCGTC ATTGA GTCGTCCAGCGC GACTGAGCCGCGCTG TERM 3581 2999676 - 2999709 + G 73 -6.7 -4.2828 | gap 1, opp_overlap 2999672 2999696, overlap 2999657 AGCGGCAGCAAGGCC CGCAGCGCCGGTCTGT CAA ACGAACTGGTG-TGCG TTTTGGTGGCTCGGG Pnap_2858 2999145 - 3000119 + | insertion element protein TERM 3582 3000287 - 3000271 - T 71 -10.9 -3.28309 | opp_overlap 3000266 3000267, overlap 3000266 ACACACACAATGCAA TGATGCC TTT GGCATCA AGCGCTTTTGGCCCC Pnap_2859 3001363 - 3000503 - | binding-protein-dependent transport systems inner membrane component TERM 3583 3000847 - 3000821 - G 75 -4.4 -4.77036 | gap 1, opp_overlap 3000836, overlap 3000823 CGTGATCAGGAAAAA CACCTGGTGCG GCCGGG CGC-CCAGGTC CATGGCGGCTTCTTC Pnap_2860 3002291 - 3001374 - | binding-protein-dependent transport systems inner membrane component TERM 3584 3002281 - 3002299 + g 74 -2.2 -4.8487 | overlap 3002281 3002284 GGCATGGGAAGGGTC GATGCGGC CAT GTCGCTCC TTGTTTTTTTAATCG Pnap_2861 3003408 - 3002308 - | spermidine/putrescine ABC transporter ATPase subunit TERM 3585 3002860 - 3002886 + g 73 -6.4 -4.30719 | overlap 3002862 TTCGATGATGTTGAC CAGCTCGAACTG GGT CTGTTCGCGCAG TTTCTTGTCCAGCGC TERM 3586 3003215 - 3003225 + g 74 -4.6 -4.57569 | overlap 3003186 CCCAGCAGGATGCGG CCCG AGG TGGG TTTTTCGAAGCCTGC TERM 3587 3003476 - 3003446 - R 100 -19.2 -5.04601 | overlap 3003473 TTCAGAAACTAAAAA GGGCTGTTCATACC CTC GGTATAAACAGCCC GGACTCACTCAGGAC Pnap_2862 3004658 - 3003498 - | extracellular solute-binding protein Pnap_2863 3006186 - 3004789 - | putative aminotransferase TERM 3588 3005127 - 3005140 + g 75 -3.7 -4.68645 | opp_overlap 3005108 CGATGTCGTCACGCA CCCGC CCGG GCAGG TTTTCCTTTTCCATC Pnap_2864 3007609 - 3006230 - | glutamate--ammonia ligase Pnap_2865 3008429 - 3007659 - | peptidase C26 Pnap_2866 3008642 - 3010120 + | GntR family transcriptional regulator TERM 3589 3010463 - 3010439 - g 73 -2.8 -4.72272 | gap 1 CGCCTCCAGGAAAAA GATGGCCGGCA AAAT CACCG-CCACC GAAGAAGGCATCCGC Pnap_2867 3010329 - 3010832 + | GCN5-related N-acetyltransferase TERM 3590 3010968 - 3010951 - f 71 -8.3 -3.78962 | opp_overlap 3010950 GCAAACACATCGAAA CGCCCGG CCTG CCCGGCG ATGGCTTCGGCCACC TERM 3591 3011455 - 3011477 + G 86 -7.6 -4.7373 | overlap 3011466 TCGCCCTGTCCAAGC CGCTGGTGGC CGC GCTGCCGGTG TTTTTGCTGGCCTGG TERM 3592 3011871 - 3011858 - g 81 -3.8 -5.00616 | TTTGGCTTCAAAAAA TGCC TGGCTT GGCA ATCTGCTGCTGGTGG Pnap_2869 3011364 - 3012326 + | hypothetical protein Pnap_2870 3013874 - 3012354 - | malonyl-CoA synthase TERM 3593 3013133 - 3013148 + g 72 -2.4 -4.69027 | overlap 3013135 GCACGCCCATGAAGA CAGTCG CTTG CGGCAG TTTTTCAATGACTTT Pnap_2871 3014694 - 3013912 - | enoyl-CoA hydratase/isomerase TERM 3594 3014602 - 3014582 - G 73 -8.2 -4.08767 | overlap 3014593 TGGATGGCCTCAAAA GCGGCACG CAACT CGCGCCAC ATCACGCGCGACATG Pnap_2872 3015723 - 3014719 - | hypothetical protein Pnap_2873 3017258 - 3015771 - | malonyl-CoA decarboxylase TERM 3595 3016360 - 3016346 - G 90 -2.7 -5.4833 | opp_overlap 3016347, overlap 3016347 TGATCGAATAAAAAA TGGCG GTGGT CGCCT TGTCCAGGTCGGACG TERM 3596 3016856 - 3016870 + g 86 -7 -5.03314 | CTGCGGCGAACTTCG CCTGGG CCT CCCTGG TTTTTTGCGCATCGG Pnap_2874 3018177 - 3017362 - | prolipoprotein diacylglyceryl transferase TERM 3597 3018095 - 3018082 - G 100 -4.5 -5.86061 | gap 1, overlap 3018084 GGCCAGGAAAAAAAA CAGGCC AAA GGCC-G CCAGGTAAGTCAGGC TERM 3598 3018094 - 3018084 - G 86 -8.2 -4.5787 | overlap 3018082 CCAGGAAAAAAAACA GGCC AAA GGCC GCCAGGTAAGTCAGG Pnap_2875 3022029 - 3018244 - | multi-sensor hybrid histidine kinase TERM 3599 3020190 - 3020200 + g 73 -8.2 -4.0896 | overlap 3020186 AGCGTTCTTCGGTGT CGCG AGA CGCG TTTTCGGCCAGCTTT TERM 3600 3020612 - 3020593 - G 72 -2.1 -4.74103 | gap 1, overlap 3020594 3020595 GGTTGAATGCAAAAA CCGCTGCG ATTCG CGCAA-GG CATCTTCCGCCTGCT TERM 3601 3021981 - 3021969 - G 74 -6.2 -4.52589 | CCCCGGTACACAAAA CCGC ATCCA GCGG CACCAGGCCCGCGTG Pnap_2876 3023141 - 3022209 - | LysR family transcriptional regulator TERM 3602 3022534 - 3022517 - G 74 -4.9 -4.56597 | gap 1, overlap 3022520 TGCGGCGCGGAAAAA TC-ACCAG CGG CTGGTCGA GCAAGTCCTTCAGCG TERM 3603 3022844 - 3022813 - G 81 -7.2 -4.52589 | gap 1, overlap 3022795 3022817 GCCGTCGAGACAAAA GCCAGCCGC-AAGCG CCC CGCTTCGCCGTCGGC GCTGGCGCGCGCAAA TERM 3604 3022881 - 3022862 - G 72 -4.2 -4.56597 | gap 1, overlap 3022863 TGGCGCGCGCAAAAA CCG-GCAAG GCG CTGGCGCGG GCCAGCAGGTCGCGC TERM 3605 3023096 - 3023054 - G 76 -12.6 -3.51232 | opp_overlap 3023015 3023057, overlap 3023050 CGCGGCTGAAATGAA GCTCTTCGGCCACGGCGACA AAC TGCCGCCAGAGCCGAAGTTC AATCAAATGGGGTGT TERM 3606 3023872 - 3023898 + G 77 -13 -3.6608 | opp_overlap 3023869 3023872 ACACCGCCAACACCA TGTCCAGCGCCT TCG AGGCCCTGGGCA TTTCGCTGCCCTACT TERM 3607 3024069 - 3024041 - g 84 -11 -4.22346 | gap 1, opp_overlap 3024066 3024067, overlap 3024031 GAAATCCATTGAAAA CGCC-GTGGCCGT CATC ATGGCCACCGGCG GCTCGACCAATGCCG TERM 3608 3024274 - 3024250 - g 71 -5.5 -4.26903 | CGCAGGTCATGAAAA TGCTGCTGGTC GCC GGCCTGCTGCA TGGCGACTGCATCAC TERM 3609 3024648 - 3024604 - g 73 -11.4 -3.55444 | gap 1, overlap 3024605 CCGGCATGCCTGAAA TGCTGGCCCCGACCGGCGC GCTGATTG GCGCCGGCCTGGGCGAG-A GCGTCGGCCTGATCA Pnap_2877 3023247 - 3024941 + | dihydroxy-acid dehydratase TERM 3610 3025002 - 3024977 - T 100 -12.7 -5.05782 | gap 1, opp_overlap 3024977 ACTGACCTGAAAAAA GCCCGTG-AGTT ACA AACTTCACGGGC TTTTTACGTTGATGA TERM 3611 3024977 - 3025002 + T 100 -12.7 -4.7629 | gap 1, opp_overlap 3024977 ACTGACCTGAAAAAA GCCCGTG-AGTT ACA AACTTCACGGGC TTTTTACGTTGATGA TERM 3612 3025042 - 3025060 + T 71 -4.5 -4.56597 | GTTTTTGGGCAGCGG GCGCC GAATTCAGG GGCGC TTTTTGGGCAGCAAA Pnap_2878 3025317 - 3025051 - | hypothetical protein TERM 3613 3025086 - 3025104 + g 74 -2.3 -4.87291 | overlap 3025066 3025082 GCAAACCGATTGCAG CGCGTTG CTTGT CGAGGCG TTTTTGCTTGCGGTC TERM 3614 3025566 - 3025552 - g 74 -2.7 -4.82901 | CGCCGTTGACAAAAA GCTGG TCGGG CCTGC CTACAAAGACGTTGC Pnap_2879 3025421 - 3025741 + | cytochrome c, class I TERM 3615 3025800 - 3025817 + T 100 -12.7 -5.1675 | opp_overlap 3025800 CAGAGCCAAAAAAAA GCCCGTC GATT GACGGGC TTTTTTAATGACTGG TERM 3616 3025817 - 3025800 - T 100 -12.7 -5.83822 | opp_overlap 3025800 CAGAGCCAAAAAAAA GCCCGTC GATT GACGGGC TTTTTTAATGACTGG Pnap_2880 3027856 - 3025862 - | acetate--CoA ligase Pnap_2881 3028015 - 3028617 + | hypothetical protein TERM 3617 3028647 - 3028681 + T 100 -12.2 -5.4505 | GCGCAAGCAGGACGG GCGCTGGCAGCTAT ATAAACC ATAGCAGTCAGCGC TTTTTTGTTCACACC fumC 3030081 - 3028690 - | fumarate hydratase TERM 3618 3028992 - 3028970 - G 83 -4.8 -5.00884 | ACGCTTTGCAAAAAA TTCCAGGCAA TCA TCGGCCGGAA CACATTGAGTTCGAA TERM 3619 3029552 - 3029574 + g 76 -6.2 -4.65895 | overlap 3029553 TCAAAGTCGCGCGAT TTCTGCGCCA GCG TGGCGCGCAG TTTTTCAATCGCCGG TERM 3620 3029844 - 3029864 + g 93 -8.9 -5.19212 | overlap 3029848 CAATGACTTCATCGG CCGCCGCCA CGA TGGCGCTGG TTTTTTGATCATCCT Pnap_2883 3030185 - 3031735 + | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TERM 3621 3032394 - 3032365 - g 88 -17.2 -3.05384 | opp_overlap 3032362, overlap 3032322 3032319 3032367 CCGTTCGCCAGCGAA CACCTGCGCGCC CTGGTC GGCGCGCAAGTG CAGTTCATCGACAAC TERM 3622 3032392 - 3032367 - g 75 -14 -3.08679 | opp_overlap 3032362, overlap 3032322 3032319 3032365 GTTCGCCAGCGAACA CCTGCGCGCC CTGGTC GGCGCGCAAG TGCAGTTCATCGACA Pnap_2884 3031762 - 3032580 + | glutamate racemase Pnap_2885 3034161 - 3032674 - | RND efflux system outer membrane lipoprotein TERM 3623 3033104 - 3033081 - G 72 -3.8 -4.56597 | gap 1, overlap 3033082 GGCCCGCGTCAAAAA TCG-GCAGCAG CAA CTGCGGCGCAA GCGTCCAGCCAAAGC Pnap_2886 3037327 - 3034154 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 3624 3034307 - 3034286 - G 91 -5.8 -5.25803 | overlap 3034274 3034288 3034289 AATCGGTACAAAAAA CACCGCCA GCACCG TGCCGGTG ATCATCCCGCCGATC TERM 3625 3034943 - 3034932 - G 70 -7.2 -4.07568 | opp_overlap 3034934 CGCGTGGTGGCAAAA GCCG ACAG CGGC ACGGACTCGCCTTTG TERM 3626 3035393 - 3035416 + g 100 -10.2 -4.87291 | opp_overlap 3035385 GCCAAAGGCGCGTCC GGCCAGCGCG TCGG CCTGCTGGCC TTTTTCCTTGCGCTC TERM 3627 3036760 - 3036744 - G 72 -7.9 -4.17657 | GACGAGAGCGCAAAA CCGGTCA GCT TGGCCGG ATCAATCCAGATCCG Pnap_2887 3038632 - 3037340 - | RND family efflux transporter MFP subunit Pnap_2888 3038786 - 3039481 + | TetR family transcriptional regulator TERM 3628 3039519 - 3039496 - T 100 -16.8 -5.34381 | opp_overlap 3039493 AAAGCCAAACAAAAA CGCCCCTGAT TTTC ATCAGGGGCG CAGTGTTGGCGGAAA Pnap_2889 3040921 - 3039653 - | aspartate kinase Pnap_2890 3042052 - 3041066 - | tRNA(Ile)-lysidine synthetase TERM 3629 3041204 - 3041222 + g 75 -13.8 -3.02511 | opp_overlap 3041192 CAACTGCTCCAGCTG CGCCGCGC TCG GCGTGGCG TATTGAAGCAGTAAC Pnap_2891 3043058 - 3042078 - | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 3630 3042915 - 3042944 + g 71 -11.4 -3.50588 | overlap 3042914 GTAGATGTCCTTGGT GAGCTGCTGGCT TTTCTT GGCCAGCTGCTC TATTTCCTCTGAAAT Pnap_2892 3043861 - 3043121 - | HhH-GPD family protein Pnap_2893 3045305 - 3043914 - | cysteinyl-tRNA synthetase TERM 3631 3044422 - 3044409 - G 72 -2.3 -4.77036 | GCGGATGATGAAAAA CCGGA TGGT TTCGG CGTCGTACTTTTGCA TERM 3632 3044524 - 3044549 + g 73 -12.5 -3.1247 | opp_overlap 3044505 3044524 3044523 TTGTGCACCCAGAAT CGCGCCAGCGG CTTG CCGTTGGCGCC TTCGCTCTGGGCAAT TERM 3633 3045533 - 3045548 + H 76 -11.8 -3.05384 | GACGACGCTGCAACC CCCGGC CCGG GCCGGG TTGCCTGGCCGCCAC Pnap_2894 3045614 - 3046180 + | TPR repeat-containing protein TERM 3634 3046548 - 3046510 - g 86 -7.3 -4.77567 | gap 2, overlap 3046533 ATGCCGAGAAGAAAA CCCGCGCC-C-CGGTCGTC CAT GAAGGCCGCGAGGCGCTGG CCAAGGGCGGCCCGA Pnap_2895 3046215 - 3046823 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type Pnap_2896 3046842 - 3047351 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 3635 3047398 - 3047453 + G 86 -12.5 -4.06055 | gap 1, overlap 3047399 TGAATGGAAACCGCC CTGACCGTGC-CCCGGATGGCCGAGC TTGCC GCTCCCCCGTCCTGGCGCACGGTCGA TTTCATTTCAGACGT TERM 3636 3047399 - 3047452 + G 84 -16 -3.03151 | gap 1, overlap 3047398 GAATGGAAACCGCCC TGACCGTGC-CCCGGATGGCCGAGC TTGCC GCTCCCCCGTCCTGGCGCACGGTCG ATTTCATTTCAGACG TERM 3637 3047475 - 3047513 + G 74 -13.1 -3.34344 | gap 1 TTCAGACGTGCATCT GCATGCC-GGCGACGAGG CCAC CTTCGCCGCCTGGCAGGC TTACTTGCAAAGTAC TERM 3638 3047639 - 3047677 + G 100 -15.9 -5.52384 | opp_overlap 3047635 3047634, overlap 3047635 GTTTTGAAAACCGCT GCGCCAGCGTGCTTGCC CAGGC GGCCAGCCGGCTGGCGC TTTTTTTCATGCACG Pnap_2897 3047386 - 3048186 + | metallophosphoesterase TERM 3639 3048312 - 3048349 + G 100 -15.5 -4.56597 | gap 1, overlap 3048328 TGGCCCGGCTTTCGG CCG-CCGACCGGCAGGCG CTG CGCGCGCTGGTCGGGCGG TTTTTGCAGCGAAAG Pnap_2898 3048197 - 3048967 + | hypothetical protein Pnap_2899 3050004 - 3049003 - | N6 adenine-specific DNA methyltransferase protein, N12 class TERM 3640 3049174 - 3049203 + g 72 -2.2 -4.73388 | overlap 3049154 3049153 3049194 CGGGCGCAGGTTGTA GAGCTTGGTC-AGC GTGC GTTCGGCCA-GCTC TTTTTCATGGCCGTT Pnap_2900 3050231 - 3050704 + | transposase Pnap_2901 3050701 - 3051363 + | transposase Pnap_2902 3053207 - 3051342 - | N6 adenine-specific DNA methyltransferase protein, N12 class TERM 3641 3053018 - 3053049 + g 95 -2.8 -5.7946 | opp_overlap 3053017 3053015 CGCGCCGGAACACAT CGGCGTAACCCGTG CGCC CGCCGATGACGCTG TTTTTTTCTTCAAAC TERM 3642 3053312 - 3053277 - R 100 -17.6 -5.21709 | opp_overlap 3053277 GGCCACAGGAAAAAA CCCGGCACGAACGCTC TGAT GAACGTCGGTGCCGGG TTGTGATGCAGCGTT TERM 3643 3053277 - 3053312 + r 88 -13.2 -3.40899 | opp_overlap 3053277 GGCCACAGGAAAAAA CCCGGCACGAACGCTC TGAT GAACGTCGGTGCCGGG TTGTGATGCAGCGTT Pnap_2903 3056193 - 3053347 - | hypothetical protein TERM 3644 3055917 - 3055933 + g 84 -8.7 -4.43477 | CCTGGCCCTTGCTGC GCTTGAC TTC GTCGAGC TTTTCCTTCAATGGC TERM 3645 3056234 - 3056220 - R 95 -3.4 -5.75342 | overlap 3056223 GTTTCGGAAAAAAAA GCAGCC AGA GACAGC ACCTGCACCCAGCAT Pnap_2904 3060303 - 3056407 - | hypothetical protein TERM 3646 3057529 - 3057505 - G 71 -5.6 -4.2828 | opp_overlap 3057526 CGCCACGGACGAAAA CGCGCTGAGC TTGCC GGTCAGCTCG CTCAGGTCGGCCGAG TERM 3647 3058226 - 3058272 + g 86 -12.9 -4.08767 | GCTTGGACGGCTTGC GCCTTGC-CGGCCGGGCTGTCGC CCA GCACCAGCCCG-CCGAGCTGGGC TTTTGCCGCAGTGAC TERM 3648 3059353 - 3059332 - G 70 -10.1 -3.54424 | gap 1 GTGCAGGCGGTCAAA CGCCAGCAGC TCA GC-GCCGGCG CCCGGCGCGGCATCG TERM 3649 3059543 - 3059567 + g 74 -4.9 -4.56607 | gap 1, opp_overlap 3059542 3059538, overlap 3059538 GGCTGCAAATCGAAG CCG-CGCAGC GCGAAG GCGGCGTCGG TTTTATGGTTGCTGG TERM 3650 3060320 - 3060332 + H 70 -3.3 -4.72272 | opp_overlap 3060320 GCATTGCCAGACAGA CTCAG GTG CCGAG TTTTTAATACCCGGC TERM 3651 3060426 - 3060402 - g 100 -21.5 -4.99134 | opp_overlap 3060402 ACCGGAAATGAAAAA CCCCGGTCAGC AGC GCTGACCGGGG TTGATGGCGGGCATA TERM 3652 3060402 - 3060426 + G 100 -21.5 -3.14344 | opp_overlap 3060402 ACCGGAAATGAAAAA CCCCGGTCAGC AGC GCTGACCGGGG TTGATGGCGGGCATA TERM 3653 3060496 - 3060517 + G 100 -9.5 -5.00884 | overlap 3060497 CGTCTCACAGTGCGT TGGAAGCAA GTGA TTGCTTCCG TTTTTTACCGGGACT TERM 3654 3060497 - 3060516 + G 73 -10.8 -3.60048 | overlap 3060496 GTCTCACAGTGCGTT GGAAGCAA GTGA TTGCTTCC GTTTTTTACCGGGAC Pnap_2905 3060384 - 3060716 + | hypothetical protein Pnap_2906 3061067 - 3061987 + | lytic transglycosylase, catalytic TERM 3655 3063291 - 3063273 - g 81 -10.2 -4.12902 | opp_overlap 3063288, overlap 3063250 GAACGACCCGGAAAA GCCGATGG TCA CCAGCGGC GTGCGCATTGGCACC Pnap_2907 3062218 - 3063462 + | serine hydroxymethyltransferase TERM 3656 3063510 - 3063473 - f 100 -20.1 -3.18681 | gap 1, opp_overlap 3063469 GCTGAACGCCATGAA GGGCGCA-GCAGCTATTA ATT CAATAGCTGCTTGCGCCC ATGCCTATTGCGCAA Pnap_2908 3063563 - 3064012 + | transcriptional regulator NrdR Pnap_2909 3064116 - 3064682 + | pilus assembly protein TERM 3657 3065172 - 3065156 - g 74 -2.1 -4.88388 | opp_overlap 3065156, overlap 3065158 ACAACTTCAGAAAAA GCTGCCT ACA AGGCCCC GTTTGCCGTCACTGC Pnap_2910 3064673 - 3065251 + | type IV pilus modification protein PilV TERM 3658 3065325 - 3065353 + G 74 -5.1 -4.60797 | GGCCTGACCATTGGT CTGCTGGTGGTAG TGG CAGCCCTCGGCAG TTTTCTGTATACGCA Pnap_2911 3065238 - 3066065 + | Tfp pilus assembly protein PilW-like protein Pnap_2912 3066072 - 3066869 + | Tfp pilus assembly protein PilX-like protein Pnap_2913 3066903 - 3070349 + | type 4 fimbrial biogenesis protein PilY1 Pnap_2914 3070371 - 3070805 + | type IV pilin PilE Pnap_2915 3070810 - 3071922 + | riboflavin biosynthesis protein RibD TERM 3659 3072313 - 3072303 - g 74 -4.6 -4.62872 | ATCAACCTCGAAAAA GCAC TGC GCGC CCATGACCGCCTCGG Pnap_2916 3072033 - 3072692 + | riboflavin synthase subunit alpha TERM 3660 3072805 - 3072785 - g 70 -10.3 -3.67622 | overlap 3072781 GACCGCGAAAACGAA GGCGACCTG GTG CTGGCCGCC GACCATGTGACGCCC TERM 3661 3073275 - 3073260 - g 76 -9 -4.08945 | AGCATGGCCTGAAAA TCGGCA CCAT TGCCGA CCTGATCGAACACCG Pnap_2917 3072689 - 3073795 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 3662 3074216 - 3074191 - g 76 -9.7 -4.09685 | CCTGACGGTCGAAAA CCTGGCGCA AGCCCAGG CGCGCCAGG AAGAAAAAGGCCGCG TERM 3663 3074251 - 3074225 - g 93 -7.8 -5.1356 | opp_overlap 3074239, overlap 3074226 3074227 CGCCAGGAAGAAAAA GGCCGCGACGCG GCG CGCGTTGCCGTC GAGATGGCAAACCTG TERM 3664 3074238 - 3074226 - g 70 -10.5 -3.67413 | overlap 3074225 3074227 GCCAGGAAGAAAAAG GCCGC GAC GCGGC GCGCGTTGCCGTCGA ribH 3073820 - 3074284 + | riboflavin synthase subunit beta Pnap_2919 3074319 - 3074840 + | NusB antitermination factor TERM 3665 3075966 - 3075995 + G 76 -9.2 -4.03234 | overlap 3075948 3075974 GCCGGGGCGGGATTT CGGGCATGCCGC GCCGGA GCGGTTTGTCCG TTTCTCTACCGCCAA Pnap_2920 3074869 - 3076065 + | aminotransferase TERM 3666 3076535 - 3076524 - g 72 -2.2 -4.7254 | overlap 3076511 AGGCGCTATTAAAAA CAGA GCAA CCTG GTGAGCATCCGGCAA Pnap_2921 3076196 - 3076651 + | thioesterase superfamily protein Pnap_2922 3076667 - 3077359 + | MotA/TolQ/ExbB proton channel Pnap_2923 3077378 - 3077812 + | biopolymer transport protein ExbD/TolR TERM 3667 3078485 - 3078472 - g 72 -3.7 -4.62069 | overlap 3078473 3078479 GGCCGAGGCTAAAAA GCAGG AAGC CCGGC AGCTGGCGAACGAGA TERM 3668 3078563 - 3078533 - g 82 -3.1 -5.13016 | gap 1, overlap 3078534 3078537 3078550 AAGGAAAAGGAAAAA CGCACCGCCGCAGC CAAC GCCGCCGCTGC-CG CCGAGAAACAAAAGC TERM 3669 3078588 - 3078577 - g 78 -3.6 -4.99043 | overlap 3078580 3078581 CGCCGAGAAACAAAA GCAG GCCG CCGC TGCATCCGCCGCCGC TERM 3670 3078654 - 3078641 - g 100 -9.5 -4.93365 | overlap 3078619 3078642 3078643 GCCGAGAAGCAAAAA GCGGC GGCT GCCGC GACAGCTGCTGCCAA TERM 3671 3078708 - 3078689 - g 84 -11.4 -4.2092 | overlap 3078679 GAAAAGCAGAAAGAA GCTGCCGC AGCC GCAGCAGC CGCAAAACAAAAGGC TERM 3672 3078733 - 3078721 - g 83 -4.7 -5.08255 | overlap 3078723 AGCCGCAAAACAAAA GGCGG CAG CCGCA GCAGCTTCCGAAAAG Pnap_2924 3077846 - 3079111 + | TonB family protein Pnap_2925 3082700 - 3079179 - | DNA polymerase III, alpha subunit TERM 3673 3079274 - 3079257 - G 76 -6.2 -4.56775 | opp_overlap 3079262 ATCGGTCGGGAAAAA CCGGGC CGCGTC GCCCAG GTGCAGCTCAGCCGT TERM 3674 3081115 - 3081067 - G 74 -5.4 -4.59109 | gap 4, overlap 3081068 3081093 TACAGCGGGCAAAAA TCGGTCA-GCTTGCC--CGGCGCG ATCAA CACGCCGCCGGCATGCATG-CCGA CATTGCGCGTGAGGC TERM 3675 3082478 - 3082448 - G 73 -13.3 -3.18023 | gap 1, opp_overlap 3082456, overlap 3082446 GCACCAGCAGCAAGA GGC-GGGAAGCCGG CGCG CCGGCTTCCTTGCC GGGCGCTTCGAGCCA Pnap_2926 3082781 - 3083542 + | hypothetical protein TERM 3676 3084246 - 3084230 - g 76 -9.3 -3.9941 | opp_overlap 3084230 CGTTTGACAATGAAA CGCCGCG CCA CCCGGCG TATGTCGCCCCCTTC Pnap_2927 3083587 - 3084900 + | hypothetical protein Pnap_2928 3085816 - 3084902 - | pirin domain-containing protein TERM 3677 3085163 - 3085113 - G 74 -10.4 -3.82031 | gap 1, opp_overlap 3085120, overlap 3085105 3085162 CCAATCACCACGAAA CGTGCTGGCGCGT-TCGCGCTGA TCTGCG TCACCGCGCCAGGCGCCAGAACG GCCAGGGTGCGCGCC TERM 3678 3085758 - 3085715 - G 76 -5.9 -4.55887 | GTCGAAAAATATAAA TGGGCCGACCGACTGGC-GCG TTGC CGCTGGCAGCAGG-CGGCTCA CCATGAAGCCGCCGC Pnap_2929 3086455 - 3085874 - | putative flavodoxin TERM 3679 3086364 - 3086332 - G 70 -11.9 -3.14132 | opp_overlap 3086332 TGCCGTCGGCATCAA TGGCGACGAGTTCGG CGC CCGCACCCGCCGCGA TGGCTTGCGCCATGC Pnap_2930 3086865 - 3086452 - | DoxX family protein Pnap_2931 3087682 - 3086981 - | pirin domain-containing protein TERM 3680 3087229 - 3087262 + g 76 -5.8 -4.59773 | overlap 3087215 CCGACCCCTGCGCCC CGTCGCTCGATGCG ACCAGC CGCAGCGCGCCGCG TTTTTCAGCCTCGGA Pnap_2932 3087792 - 3088745 + | LysR family transcriptional regulator Pnap_2933 3088807 - 3089958 + | FAD dependent oxidoreductase TERM 3681 3090808 - 3090792 - gf 74 -5.8 -4.4078 | gap 1, overlap 3090794 GCTGTCCAAGCAAAA CG-GCGC GCAG GCGCTCG ACACGTCCCGGCCGC Pnap_2934 3089971 - 3090954 + | glutamate--tRNA ligase TERM 3682 3091636 - 3091674 + GF 75 -11.6 -3.32997 | overlap 3091632 CCAGCGCGGCCAGCG TGCAGCTCAGCGTTCCGG TCA TCGCGGCGCTGGGCGGCA TTGCCTTTCTCGGCG Pnap_2935 3090927 - 3091787 + | hypothetical protein TERM 3683 3091806 - 3091763 - f 95 -12.5 -4.07568 | gap 3 GGTGGTGCTGCAAAA GCGCGCCGCGCCCGGCAG-GCC CTG AACGCTGCCGGGCG-G-CGCAC TAAAATCAGCGGGTG TERM 3684 3092451 - 3092436 - g 86 -8.2 -4.56597 | GCCTTTGTTGAAAAA CACGGC CGAT GCCGCG AGCGATGGCTACGCG Pnap_2936 3091819 - 3092559 + | tRNA (guanine-N(7)-)-methyltransferase TERM 3685 3093258 - 3093220 - g 70 -10.3 -3.53811 | opp_overlap 3093224 TTGATCTGCTGGAAA TC-CGGGGCCAACGGGCGC TTT ACGCCC-TGAGCCCCGTGA CCGGGAAAAAGCACC TERM 3686 3093285 - 3093269 - g 83 -7.9 -4.59773 | CGTGACCGGGAAAAA GCACCAG TTG CGGGTGC ACATGAACGCGCTGG Pnap_2937 3092556 - 3093464 + | pseudouridine synthase TERM 3687 3093487 - 3093519 + T 72 -12.1 -2.63585 | overlap 3093486 3093485 ACTCTCATTTTGATA GCTTCCTGCGCTTAT GGA ATAAGCGCAAAAAGC CTATTTGGCATGTAA Pnap_2938 3094691 - 3093570 - | transglutaminase domain-containing protein TERM 3688 3094826 - 3094844 + r 71 -4.4 -4.56597 | overlap 3094828 CCTTGATTATCGCCA CAGCCGGT AAA AGCGGCAG TTTTTCAGGCCAACA Pnap_2939 3095404 - 3094865 - | redoxin domain-containing protein TERM 3689 3095022 - 3095047 + g 70 -10.4 -3.54424 | overlap 3095023 CCATCGACATCGAGC AGCACCGGCA GGGTGA TGCCGGTGCG TTTGGCAAACTGCAG TERM 3690 3095023 - 3095046 + g 72 -13.9 -2.72511 | overlap 3095022 CATCGACATCGAGCA GCACCGGCA GGGTGA TGCCGGTGC GTTTGGCAAACTGCA Pnap_2940 3097034 - 3095505 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 3691 3096204 - 3096187 - G 77 -2.6 -4.98255 | GCGTAATCATAAAAA CCGCGA CCCGAT TTGCGG CCCAGCAAGCCGCCA Pnap_2941 3097825 - 3097031 - | enoyl-CoA hydratase/isomerase TERM 3692 3097319 - 3097364 + g 89 -17.6 -3.16564 | gap 1 AGGGGCGGCGATGCG GGTGGTCGTC-AGCGCCAGGC GCAGG GCCTGGCGCTTGCCGACCGCA TTGGTCAGGTAAGGG Pnap_2942 3099108 - 3097825 - | oxidoreductase FAD/NAD(P)-binding subunit TERM 3693 3098513 - 3098480 - G 73 -8.7 -4.07885 | overlap 3098467 TACTGGCGCGCAAAA TGCGGCCGGCCGCTG GCGT CAACGCCCGGCGGAA TGATGCCGATGGACT TERM 3694 3098804 - 3098778 - G 76 -11.5 -3.69434 | GCAACGAAGGTGAAA CCGGCTCGATG TCGGG CACCGCGCCGG CGGCGACGCCTTCGG TERM 3695 3098955 - 3098967 + g 72 -4.1 -4.59773 | opp_overlap 3098946 GAGAGATGCAGGCCA TGCAG AAA TTGCA TTTTTCGGCATCCAC Pnap_2943 3100692 - 3099265 - | benzoyl-CoA oxygenase component B TERM 3696 3100539 - 3100498 - G 81 -13.7 -3.54424 | CTTGACGTGGCCAAA CTGCGCCCAGCCGTTCG GATCGACG CTAACGGCCGTGCGCAG GTACACATCCATGTT TERM 3697 3100806 - 3100824 + r 70 -9.6 -3.33261 | GCCTGTTTAGACGCG GTTCCAGT CAA ACTGGGAC TTGTCGCCCTTGCCA Pnap_2944 3102455 - 3100797 - | enoyl-CoA hydratase TERM 3698 3102156 - 3102203 + g 91 -4.9 -5.27938 | gap 2 GTTCACTTTCCAGGA GTG-GCTGCTCACGC-CCAGCAT GAAG ATGTTGGCGCCGGAGCAGAACAC TTTTTCTTTGGCGCT TERM 3699 3102554 - 3102543 - R 71 -4.4 -4.53857 | opp_overlap 3102543 ATCAAAAACAAACAA GCAT TTTT ATGC ATTTTCTTGTAAAAG Pnap_2945 3103546 - 3102572 - | anaerobic benzoate catabolism transcriptional regulator Pnap_2946 3103634 - 3104101 + | hypothetical protein TERM 3700 3104172 - 3104190 + G 70 -10.2 -3.54741 | CTGGCAGGCTGGCAC CGGCGCGG GCA CTGCGCTG TTTGACCCGGTGCTG TERM 3701 3104636 - 3104626 - g 86 -8.2 -4.56597 | opp_overlap 3104610, overlap 3104628 GGCCTGTGGGAAAAA GCCG CGC CGGC CCTGCTGTCAGGCGT TERM 3702 3105009 - 3105025 + G 71 -5 -4.4078 | opp_overlap 3105008 3105011, overlap 3105011 GTCGGGCCAGAAATG CACGGC CATTC GCCGCG TTTTCGTTCCCGAGG Pnap_2947 3104122 - 3105693 + | aldehyde dehydrogenase TERM 3703 3106520 - 3106534 + G 78 -2.8 -5.00616 | opp_overlap 3106509 3106508, overlap 3106508 AAACGCTGGGTGGAG CACC AGCCGAC GGTG TTTTTTGGCGCGCCC TERM 3704 3106709 - 3106723 + G 75 -2.8 -4.84017 | GGCATTGGTTCGACC GAAATG CTG CATATC TTTTTGTCCAACCTT Pnap_2948 3105719 - 3107302 + | benzoate-CoA ligase family TERM 3705 3107372 - 3107400 + G 72 -3.8 -4.65895 | overlap 3107358 3107373 ATCAGTGGATTGCCC G-CGACCGGGCGGC CGC GCCGC-TGATCGTC TTTTTGCATGAAGGC Pnap_2949 3107299 - 3108114 + | alpha/beta hydrolase fold Pnap_2950 3108111 - 3109274 + | extracellular ligand-binding receptor TERM 3706 3109732 - 3109753 + G 72 -3.7 -4.55295 | ACTGCTGGGCTATGT GCTGGAG TGGGCATT CTTCAGC TTTCTTTATGAACGC TERM 3707 3110257 - 3110272 + G 72 -4 -4.56597 | overlap 3110242 3110259 GATCGGCTTTGTCGA TACCTT TGGC AAGGTG TTTTTGCCACAGGCC Pnap_2951 3109415 - 3110362 + | inner-membrane translocator TERM 3708 3110492 - 3110527 + G 70 -11.8 -3.24232 | overlap 3110490 3110489 3110514 ATGCCATCTTTGCGC TCAGCCTGGAGCTGCT GGTC GGCACCACCGGGCTGA TCTGTTTCGGCCAGG TERM 3709 3111118 - 3111162 + G 70 -10.5 -3.62096 | overlap 3111115 ATCATGATCATCCTG GGCGGGCTCGGTCATCTGCGC GGC GCGCTGATCGGCGCGTTCGCC TTTGCGCTGCTGCAG Pnap_2952 3110359 - 3111360 + | inner-membrane translocator Pnap_2953 3111347 - 3112123 + | ABC transporter related Pnap_2954 3112125 - 3112844 + | ABC transporter related TERM 3710 3113026 - 3113008 - T 91 -7.4 -4.87803 | overlap 3113009 CATTGTCAAACAAAA CGCCTCTT TTC AAGAGGCT GATGACAATTACTTT TERM 3711 3113025 - 3113009 - T 74 -10.9 -3.51958 | overlap 3113008 ATTGTCAAACAAAAC GCCTCTT TTC AAGAGGC TGATGACAATTACTT TERM 3712 3113146 - 3113169 + T 89 -13.2 -3.75153 | opp_overlap 3113146 ATTCCCAACAAAAAA GGGCAGCATT TTGA AGTGCTGCCC TTTGAATTGGAGCGG TERM 3713 3113169 - 3113146 - T 100 -11 -5.45652 | opp_overlap 3113146 ATTCCCAACAAAAAA GGGCAGCATT TTGA AGTGCTGCCC TTTGAATTGGAGCGG TERM 3714 3113256 - 3113278 + T 82 -5.6 -5.055 | overlap 3113260 AGCTACTCCCGCGAG TCTAGCTATA AAT TATAGCTTGG TTTTTTAACCATTCG TERM 3715 3113260 - 3113274 + T 71 -7.2 -3.93166 | overlap 3113256 ACTCCCGCGAGTCTA GCTATA AAT TATAGC TTGGTTTTTTAACCA TERM 3716 3113436 - 3113459 + T 89 -13.2 -3.75153 | opp_overlap 3113436 ATTTCCAATAAAAAA GGCCAGCATT TTGA AGTGCTGGCC TTTGAATTGGAGCGG TERM 3717 3113459 - 3113436 - T 100 -11 -5.45652 | opp_overlap 3113436 ATTTCCAATAAAAAA GGCCAGCATT TTGA AGTGCTGGCC TTTGAATTGGAGCGG TERM 3718 3113566 - 3113578 + T 78 -6.3 -4.70169 | overlap 3113547 3113577 CTATAAATTATAGCC TGGTT TTT AACCA TTTTCTTGAATCTAG Pnap_2955 3116034 - 3113605 - | ATP-dependent protease La TERM 3719 3114301 - 3114326 + g 100 -4 -5.44119 | gap 1 CTCATTGAGGTTATC TGGCGTCACCA CGACT TGG-GGCGTCA TTTTTTTAAGCTGGA TERM 3720 3115077 - 3115097 + g 72 -2.6 -4.72497 | gap 1, overlap 3115074 3115070 3115080 CGGCCTCTGCATTGA CC-AGGTCA TGCT TGATCTTGG TTTTCTTGCTCCATG TERM 3721 3115353 - 3115376 + g 93 -2.3 -5.61596 | GCTGGTTTTTTTCCA TCTGCCGCT TGACCC GGCCGCGGA TTTTTTTATCCACAT TERM 3722 3115560 - 3115571 + g 74 -2.2 -4.90079 | overlap 3115555 AAATCGACGTCAAAA TCTC AGGC GGGA TTTTCTTGTTCAGCT TERM 3723 3116139 - 3116158 + r 80 -4.2 -5.03145 | gap 1 TTTCAAGCGTTTCCT GCC-GTGTC CGG GACTCAGGC TTTTTTAGCGGCTTC clpX 3117418 - 3116153 - | ATP-dependent protease ATP-binding subunit TERM 3724 3116325 - 3116347 + g 70 -9.8 -3.64703 | overlap 3116345 GCACCGGTTTTTCGG GCCAGTGCCT TGC GGGCAATGGC TTTCAATGCCGAAGG TERM 3725 3116384 - 3116423 + g 74 -5 -4.62783 | gap 1, overlap 3116386 TTCGAGATCAACGCC TTCCATGG-CAAGCAGCTT GCT GAACTGCTTGACCACGGCA TTTTTAGGCTCCGTC TERM 3726 3116542 - 3116578 + g 90 -2.2 -5.46698 | gap 2, overlap 3116534 TGATCAGGTCTTCAG GCTCGACATCCTTGAAGG CTT CCGTC-AGGCTG-CGCGC TTTTTTGCTTTTGAC TERM 3727 3117512 - 3117486 - R 100 -10.2 -5.87996 | opp_overlap 3117486 TAACCAATAAAAAAA CGGCGTTTCTGT AAT AGAAAAACGCCG TTGTTGCAGGGCAGC Pnap_2957 3118205 - 3117555 - | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 3728 3117879 - 3117837 - G 82 -6.2 -4.82667 | gap 1, opp_overlap 3117849 GGACGACAGCAAAAA CGCACCCATGCTG-GCGGC CATGCC GACGCACAGCGTGGACACG TCCGGCTTGATGAAT TERM 3729 3118287 - 3118247 - R 95 -10.6 -4.66609 | gap 1, overlap 3118251 TACTGTACCCAAAAA TGA-ATTGGGGCCTGCACC GCAA AGCACAAGCCCCAATCTCA GGAGAAAACAGCTGT TERM 3730 3118282 - 3118251 - R 82 -11.6 -3.83042 | overlap 3118247 GTACCCAAAAATGAA TTGGGGCCTGCACC GCAA AGCACAAGCCCCAA TCTCAGGAGAAAACA tig 3119613 - 3118303 - | trigger factor TERM 3731 3118570 - 3118593 + g 71 -9.6 -3.80733 | GCCCAGACGGACGCG CTTTTCAGCC TGAG GGCGGAAAAG TTCTTCTGGAATCGG TERM 3732 3118965 - 3118988 + g 79 -8.2 -4.25104 | gap 1 CGGCCGGGAAGTTCA GCGG-GAAAGT CTT GCTTTCGCCGC TTTTCATGCCGCGCA TERM 3733 3119662 - 3119647 - R 84 -9 -4.22948 | overlap 3119650 AAAATTTATTCAAAA CTAGGC TTTT GCCTAG CCAGCTGCAGTCAAG TERM 3734 3119860 - 3119824 - R 100 -17.5 -5.00616 | gap 1, opp_overlap 3119827, overlap 3119826 GCGCTCCTGAAAAAA CAG-CGGGAATCCGGA TTACTG TCCGGATTCCCGCCTG AAATCGGTCAACTTT TERM 3735 3119857 - 3119826 - R 100 -20.3 -4.13561 | opp_overlap 3119827, overlap 3119824 GCTCCTGAAAAAACA GCGGGAATCCGGA TTACTG TCCGGATTCCCGC CTGAAATCGGTCAAC Pnap_2959 3123147 - 3119932 - | acriflavin resistance protein TERM 3736 3121256 - 3121204 - G 83 -6.7 -4.87803 | CAGCGGCAAATAAAA GCGCGGCACGCCCGAGCCCAGCCAG GTG CTGACCGAGGCCACGCCTTCCTCGC GCATCAGCCGCTGCT TERM 3737 3122458 - 3122515 + g 70 -7.5 -4.08216 | gap 1, overlap 3122459 GGATTCAATCGCGTT TTGC-TGGCCGAGCTGCGCCAGCACCTG GTT CAGGTCCAGCCCCAGCGTGGCCAGGCGC TTTTGCGAAACCTCG TERM 3738 3123081 - 3123044 - G 71 -9.1 -3.80841 | gap 1, opp_overlap 3123063, overlap 3123046 3123047 AGCACCAGCAGCAAA TAGCGCGTCAGCGCCGGA TGC TCCAGCGCCCA-GCGCGA GAGGTTGAATTTTTC TERM 3739 3123079 - 3123046 - G 74 -11.7 -3.48738 | gap 1, opp_overlap 3123063, overlap 3123044 3123047 CACCAGCAGCAAATA GCGCGTCAGCGCCGGA TGC TCCAGCGCCCA-GCGC GAGAGGTTGAATTTT Pnap_2960 3124318 - 3123155 - | RND family efflux transporter MFP subunit Pnap_2961 3124416 - 3125309 + | squalene/phytoene synthase Pnap_2962 3126737 - 3125367 - | hypothetical protein TERM 3740 3125840 - 3125864 + g 86 -6.3 -5.00616 | ATGAATCTGCATCCA GGGGATCTGGC CAA GTCACAGCCCC TTTTTTGCGCAACGC Pnap_2963 3128818 - 3126737 - | ATP-dependent DNA helicase RecQ TERM 3741 3127802 - 3127792 - G 78 -6.8 -4.63218 | CGCCGCTCAACAAAA TGCC ATA GGCA GACTCCAGAGCGCGT TERM 3742 3128622 - 3128608 - G 82 -5.6 -4.84642 | GCGAAATCAACAAAA CTGGAC CCT GACCAG CATCACGAAGCAACT TERM 3743 3129178 - 3129161 - g 100 -10.5 -4.72986 | opp_overlap 3129161 3129160 TATGTCCAGCAAAAA GCCGCCG CATC CGGCAGC AGTTTTTATTACGCC Pnap_2964 3129092 - 3129973 + | squalene/phytoene synthase TERM 3744 3130944 - 3130976 + G 71 -8.9 -3.96148 | TTCGTGTTTGACCGT GGCCAGCTCGGCGGC CCG GCGGGCTTGCTGGCC TTTGTCATCAGCGCC Pnap_2965 3129978 - 3131249 + | amine oxidase Pnap_2966 3132283 - 3131483 - | MltA-interacting MipA family protein TERM 3745 3132126 - 3132174 + g 77 -15.1 -2.64981 | opp_overlap 3132110, overlap 3132118 3132116 3132123 3132122 3132173 GCGCTGACTTCGGTG GCGCCGCTGCCGGGGTATTTGGC ATG GCTGACCACGCCGGCGCCGGCGC TGAATTTCCAGCTGT Pnap_2967 3135441 - 3132343 - | acriflavin resistance protein TERM 3746 3133277 - 3133334 + g 80 -16.1 -2.62983 | gap 1 GTGCCGATCCGCACC GCGTCGGCCACCGCCTGTGCCGTCACGC CGA GCGCGGCGGCGCGGGCCG-GGTCGGTCC TGATCTGCACCTCGG TERM 3747 3134134 - 3134113 - G 78 -6.5 -4.56597 | overlap 3134098 3134115 3134116 GGCGGTCGGCAAAAA CACCGCCAC CAGG GTGAAGGTG GTGGCAATCACCGCC TERM 3748 3134759 - 3134805 + g 72 -4.1 -4.57341 | gap 1, overlap 3134761 GCCGCCAGCGTGCGG GCCGACTGGCGCTGGC-CGGCG ATAT CGCCCTGCCCGCCCGAGCCGTC TTTTTGCGCCGCCTT Pnap_2968 3136679 - 3135438 - | RND family efflux transporter MFP subunit TERM 3749 3136078 - 3136022 - G 93 -18.5 -3.39018 | overlap 3136020 3136076 GCACCAGGCGAAACA GCTCGGTGCCGGCGGGCACCACGTTGC CCA GCACCGCCGAGCGCGCCGACACCACGC CGTCATCGACCGCCA Pnap_2969 3138241 - 3136676 - | RND efflux system outer membrane lipoprotein TERM 3750 3136921 - 3136949 + g 90 -2.1 -5.40072 | overlap 3136923 3136936 GCGCCTCTTCCAGGT CGAGCAGGCTGAC ATT GCCGGCCCGCCAG TTTTTTTCAACCGCC TERM 3751 3138205 - 3138218 + g 83 -6.7 -4.92314 | AATTCCCGGCATGGC GGCTT TGCA AAGCC TTTTTCTCGATTCCT Pnap_2970 3138524 - 3139216 + | two component transcriptional regulator Pnap_2971 3139238 - 3140326 + | integral membrane sensor signal transduction histidine kinase Pnap_2972 3141223 - 3140528 - | HAD family hydrolase TERM 3752 3140984 - 3141014 + g 71 -11.1 -3.51825 | overlap 3140983 3140981 GCGGCTCAGGGCCAG CCGGATCGCCTTG GTGCG CAAGGCGCTCAGG TTGTGCTTGAGCTCC Pnap_2973 3141244 - 3142347 + | ferrochelatase Pnap_2974 3143095 - 3142370 - | hydrolase TERM 3753 3142727 - 3142682 - G 72 -7.5 -4.13014 | gap 1, overlap 3142685 CGGATAGTCGGAAAA CACCGCGACTTGCTTGCCTGCG CCG CGCAAGCCGGCAAACAGCG-TG TCCAGGTGCGGGTAG TERM 3754 3143545 - 3143505 - g 79 -10.9 -3.91897 | overlap 3143506 CTGGCCAGCCAGAAA CCGGCTTCGCGCACCACGC CCG GCGTGCTGCTCGGCGCCGC AGCCACCAGCGCAAC TERM 3755 3143544 - 3143506 - g 77 -14.4 -2.94924 | overlap 3143505 TGGCCAGCCAGAAAC CGGCTTCGCGCACCACGC CCG GCGTGCTGCTCGGCGCCG CAGCCACCAGCGCAA Pnap_2975 3143199 - 3143789 + | hypothetical protein Pnap_2976 3144397 - 3143921 - | dehydratase Pnap_2977 3145704 - 3144466 - | major facilitator superfamily transporter TERM 3756 3144651 - 3144619 - G 72 -3.9 -4.59853 | opp_overlap 3144642, overlap 3144595 3144593 3144621 GTAAGCGCCCAAAAA GCCGCCGACCTGGTG CGC CAGCATGACGACGCC GAACAGCATCGCCAT TERM 3757 3145245 - 3145291 + g 78 -10.6 -4.07568 | opp_overlap 3145255 GCGCCATGGCGAACT GCCCGAACGAGCCGCCGGCATT GAC GATGCCGGTGGCCAGGCCGCGC TTTTCAGGCGCCACC TERM 3758 3145281 - 3145255 - G 72 -13.7 -2.71681 | opp_overlap 3145245 GAACTGCCCGAACGA GCCGCCGGCAT TGACG ATGCCGGTGGC CAGGCCGCGCTTTTC TERM 3759 3145514 - 3145502 - G 76 -9.1 -4.07687 | ACCGCGCCGGCAAAA GGCTG CGT CAGCC CCCACCAGAGCTGGC Pnap_2978 3146209 - 3145697 - | MarR family transcriptional regulator TERM 3760 3146210 - 3146253 + H 87 -13.6 -3.21747 | gap 1, opp_overlap 3146233, overlap 3146215 3146218 AGGGTGTGTGGACAT GGTTTTGA-TTGTAGCTACAA TTA TTGTAGCTACAACTTAAAATC TTCATCATGACCTCA Pnap_2979 3146260 - 3146808 + | hypothetical protein Pnap_2980 3147553 - 3146840 - | hypothetical protein TERM 3761 3147144 - 3147164 + g 70 -10.3 -3.54935 | overlap 3147160 GCTTGCACGGCAGCG GCAGGCGCT GGC GGCGCCGGC TTTGGCACGGGTTTG Pnap_2981 3149335 - 3147566 - | peptidoglycan binding domain-containing protein TERM 3762 3147883 - 3147858 - G 76 -8.9 -4.15106 | CAGTAAGTCGCAAAA TCGCCGCGCCA CAGC CGGCCCAGCGA GACCAGCCTGACGGT TERM 3763 3148248 - 3148298 + g 76 -9.4 -4.08692 | opp_overlap 3148230, overlap 3148248 3148252 TTCGCCTGGGGGGCT GCTGGCGAGGCCGGCAACGCTGAC GCC GTCGGTTGAGCCGGCCGCGCTGCC TTTTGCGCAGGGTTC TERM 3764 3149156 - 3149099 - G 76 -9.1 -3.99324 | gap 3, overlap 3149152 CGTGAGCAGCACAAA GCCCCCGCCCGTGCCGC-TGGCCGCGCC GTGCG GGC-CGGCCACGCCGTA-GAGCAGGTGC GCCAGCGCCTCCCGG Pnap_2982 3149396 - 3150688 + | hypothetical protein Pnap_2983 3151708 - 3150704 - | sodium/calcium exchanger membrane region TERM 3765 3151453 - 3151443 - G 76 -6.8 -4.46757 | overlap 3151444 AACACATCCACAAAA GCCA GGA TGGC CAGGTTGAACACCGT Pnap_2984 3151815 - 3152225 + | lactoylglutathione lyase TERM 3766 3152347 - 3152381 + T 71 -10.3 -3.30124 | opp_overlap 3152340 3152357, overlap 3152356 TGATGCAAGCCCCAG GCAGCAAGAA-CTATCA TTT TGATAGCTTCTTGC-GC TTGTGGGGCGTGCGC TERM 3767 3152437 - 3152421 - T 91 -7.3 -5.09225 | ATTTGATTCAAAAAA TCAGCCT GAA AAGCTGA AATTCCGGCTCAGAC Pnap_2985 3153109 - 3152447 - | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 3768 3152794 - 3152765 - G 86 -16.4 -3.14344 | CACGCCGGGCAGCAA GGCCAGGCCGGC ATCCCG GCAGGCCTGGCC GACGGCATGGGTGTA TERM 3769 3152873 - 3152828 - G 76 -9.6 -3.97947 | CGGACTGACGACAAA GCGC-GCGCCGGCCATGGCGCA GGCC TGGGCGTCGGC-GGCGCTGCGC ACCGTTCCCGCACCG Pnap_2986 3154941 - 3153100 - | phosphogluconate dehydratase TERM 3770 3155108 - 3155084 - R 100 -15.8 -5.40072 | opp_overlap 3155084 GGTGGCGCAAAAAAA TCCGCAGTGC GCGAA GCACTGCGGA TTTTTGTTACCGGGT TERM 3771 3155084 - 3155108 + r 100 -15.8 -5.06816 | opp_overlap 3155084 GGTGGCGCAAAAAAA TCCGCAGTGC GCGAA GCACTGCGGA TTTTTGTTACCGGGT Pnap_2987 3155691 - 3155152 - | OmpA/MotB domain-containing protein TERM 3772 3155668 - 3155643 - G 81 -3.9 -5.01811 | opp_overlap 3155654 CGATCAAACCAAAAA CCAGAAACAGG GCCA CGCGTTGCTGG CTGTCATCATCCTGA Pnap_2988 3155733 - 3156344 + | ChaC family protein Pnap_2989 3156360 - 3157007 + | pyridoxamine 5'-phosphate oxidase Pnap_2990 3157515 - 3157012 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Pnap_2991 3159153 - 3157531 - | poly(A) polymerase TERM 3773 3157599 - 3157635 + g 100 -17.3 -4.16016 | gap 1 CGGAGCCTTCCACCG CTCCGGCGCCGCC-CA CGGGCT TGCGGCGGCGCCGGCG TTTCTTGGCAGGTAG TERM 3774 3157740 - 3157762 + g 100 -14.8 -4.62069 | overlap 3157741 CATCGACCCGCTTGA CCCGCACGCG CGG CGCGTGCGGC TTTTTGAGCTGCGAC TERM 3775 3157741 - 3157761 + g 93 -18.3 -3.3692 | overlap 3157740 ATCGACCCGCTTGAC CCGCACGCG CGG CGCGTGCGG CTTTTTGAGCTGCGA TERM 3776 3157917 - 3157901 - G 71 -5.8 -4.36127 | gap 1, overlap 3157902 3157903 3157912 3157913 CGCAAGAAGTCAAAA CCGGCGC GAAA GCGC-GG CTGATCGAGCAGCGA TERM 3777 3157938 - 3157954 + g 78 -10.1 -4.07568 | opp_overlap 3157936 CGAGCAGCGAATATG GCGCGTT GCC GACGCGC TTTTCAAAACGCGGC TERM 3778 3158389 - 3158405 + g 84 -4.3 -5.14965 | CAGGCCGCACATTTC CTTCAGC GGC GCCGAGG TTTTTTCCTCGAACT Pnap_2992 3159983 - 3159276 - | HAD family hydrolase TERM 3779 3159941 - 3159952 + g 72 -2.2 -4.78839 | gap 1 ATGCCAATTTAAGAG GCGCC TTT GG-GC TTTTCTTGTCAGCTT Pnap_2993 3160687 - 3159980 - | chromosomal replication initiator, DnaA TERM 3780 3161024 - 3160995 - g 74 -9.1 -3.85698 | opp_overlap 3161018, overlap 3160997 CCCCTTTCCTACAAA GACGCCGGCGTTG ACAT CGACGCGGGCGAC GCCCTGGTTGAACGC TERM 3781 3161084 - 3161060 - g 72 -4.2 -4.56597 | gap 1, opp_overlap 3161082 GCCGCTGGCCAAAAA GACCATGCGCG AAGG CGTGC-TGGCC GGCATCGGCGGCTTT Pnap_2994 3160968 - 3162005 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 3782 3162143 - 3162123 - f 85 -11.1 -3.92373 | TACTGGACGCACAAA GACTGGCCC TGA AGGCCAGCC TGGCCGTGATGCGCG Pnap_2995 3162440 - 3162856 + | hypothetical protein Pnap_2996 3162881 - 3163354 + | transposase Pnap_2997 3163351 - 3164013 + | transposase TERM 3783 3164544 - 3164564 + F 76 -12.5 -2.79796 | opp_overlap 3164543 3164542 AGCCTCAAGGAAATC GCCCAGGCC TTC GGCCTGCGC TGTACTGGCATGGAC TERM 3784 3164704 - 3164688 - g 75 -3.6 -4.90266 | CCCAGTAACGAAAAA CCGCTC GAATG GATCGG CAGCAGCCACAAGGA TERM 3785 3164953 - 3164938 - g 75 -4 -4.77165 | gap 1, overlap 3164942 GCTTCCAGAAGAAAA GCAA-GC GCG GCATTGC CACGCCAAAGGAAGA TERM 3786 3164958 - 3164942 - g 79 -11.5 -3.85542 | overlap 3164938 CCAGAAGAAAAGCAA GCGCGGC ATT GCCACGC CAAAGGAAGAGATGG Pnap_2998 3164670 - 3165047 + | hypothetical protein Pnap_2999 3165028 - 3165363 + | XRE family transcriptional regulator TERM 3787 3166254 - 3166266 + G 74 -5.5 -4.4891 | overlap 3166251 TGTTCACGCTGGCGC GCTTC AGC GAGGC TTTTCTGGTGCTGCG TERM 3788 3166545 - 3166584 + G 93 -8.4 -5.03715 | gap 1, overlap 3166536 3166549 TCGCCACCATGGTCG CCCA-GGTCGCGCCGCCCG ACT TGCGCGGCACGGCCTTTGG TTTTTTCAACCTCAT TERM 3789 3166549 - 3166579 + G 100 -12.4 -4.42765 | overlap 3166536 3166545 CACCATGGTCGCCCA GGTCGCGCCGCCCG ACT TGCGCGGCACGGCC TTTGGTTTTTTCAAC TERM 3790 3166630 - 3166672 + G 76 -10.4 -3.85698 | overlap 3166617 3166631 GCTGCTGGCCAGCAC CGTGGCGGGCGTGCTGTG GGACCAG CTGGGCGCGCCCGCCACC TTTGTCACCGGCGCC TERM 3791 3166631 - 3166671 + G 74 -13.9 -2.91276 | overlap 3166617 3166630 CTGCTGGCCAGCACC GTGGCGGGCGTGCTGTG GGACCAG CTGGGCGCGCCCGCCAC CTTTGTCACCGGCGC Pnap_3000 3165551 - 3166744 + | major facilitator superfamily transporter Pnap_3001 3166898 - 3167506 + | isochorismatase hydrolase Pnap_3002 3167503 - 3168513 + | AraC family transcriptional regulator Pnap_3003 3169412 - 3168561 - | hypothetical protein Pnap_3004 3171072 - 3169507 - | integral membrane protein MviN TERM 3792 3169693 - 3169669 - G 78 -9.9 -4.0162 | overlap 3169671 CGCCCAGAGCAGAAA CACCGCCAGCA GCG CGCTGGCGGAA AAAACCCGCAGCCCA TERM 3793 3169691 - 3169671 - G 85 -14.7 -3.60104 | overlap 3169669 CCCAGAGCAGAAACA CCGCCAGCA GCG CGCTGGCGG AAAAAACCCGCAGCC TERM 3794 3169756 - 3169716 - G 90 -8.2 -4.88918 | gap 1 GCAGCCCAAACAAAA CCCAGCCCGGCGCCGGC GTGTAGCT GCC-GCGCCGGATCAGG CCAATCAGCAGCGCC TERM 3795 3169951 - 3169922 - G 75 -3.5 -4.82901 | gap 1, opp_overlap 3169925, overlap 3169923 TGGCTGGCATAAAAA CCCGGT-GCCAGCA CCT TGATGGCGACCAGT CCGAGCAGCCCGGCT TERM 3796 3171394 - 3171420 + G 71 -5.7 -4.35483 | CCCGATTTTCCACGC CACCGCGTCGG ACAGG CCTGCGCCGTG TTTCTTGTCCTGGCC TERM 3797 3171509 - 3171525 + G 76 -10.8 -3.72576 | overlap 3171512 TCATCAGCGCCAGCC GCGCCG AGCAG CGGCGC TTTGATGCGCCGGGC Pnap_3005 3171334 - 3173451 + | TonB-dependent receptor TERM 3798 3173950 - 3173916 - g 81 -4 -5.06414 | overlap 3173917 TCGCGTGAAGAAAAA TGCCGCCATCTACGCC GCG GGCGTCGGCTGCAGCG AATGCCTGGCCGAAT Pnap_3006 3173509 - 3174177 + | ankyrin TERM 3799 3174199 - 3174171 - f 70 -6.5 -4.07885 | CAGGCTGCTGGAAAA CAGCTGACGCGTC TGC GACGCCACGGCCG GCGACTGACCCTTCA TERM 3800 3174504 - 3174493 - g 73 -3.6 -4.77438 | overlap 3174494 3174498 3174501 ATCCAGCAGCAAAAA GGCA AGAG CGCC GCACCGGCGGCCATC Pnap_3007 3174400 - 3176121 + | Pyrrolo-quinoline quinone Pnap_3008 3176155 - 3176745 + | cytochrome c, class I TERM 3801 3176818 - 3176795 - f 80 -8.8 -4.07568 | opp_overlap 3176795 TTTTCTGGGTCAAAA GCCCGCTATC GTAT AATCGCGGGC TTTGCTGCATCATCC TERM 3802 3176795 - 3176818 + F 71 -8.1 -3.77196 | opp_overlap 3176795 TTTTCTGGGTCAAAA GCCCGCTAT CGTATA ATCGCGGGC TTTGCTGCATCATCC TERM 3803 3177019 - 3177005 - g 72 -4.2 -4.64144 | AAGAACGTCGAAAAA GCCG TTTTAGC CGGC GACAAAGACAAAGCC Pnap_3009 3176867 - 3177187 + | ribosomal protein S20 TERM 3804 3177295 - 3177264 - T 100 -13.2 -4.25104 | opp_overlap 3177273, overlap 3177265 3177273 TGCGCTGCAGCAAAA GTAAAAAAACCGCC TTCG GGCGGTTTTTTTAT GCCTGTGTAAAGAGC TERM 3805 3177294 - 3177265 - T 100 -16.7 -3.14848 | opp_overlap 3177273, overlap 3177264 3177273 GCGCTGCAGCAAAAG TAAAAAAACCGCC TTCG GGCGGTTTTTTTA TGCCTGTGTAAAGAG TERM 3806 3177286 - 3177273 - T 100 -9.5 -5.79588 | opp_overlap 3177273, overlap 3177265 3177264 GCAAAAGTAAAAAAA CCGCC TTCG GGCGG TTTTTTTATGCCTGT TERM 3807 3177273 - 3177286 + T 100 -9.5 -5.65177 | opp_overlap 3177265 3177264 3177273 GCAAAAGTAAAAAAA CCGCC TTCG GGCGG TTTTTTTATGCCTGT Pnap_3010 3177645 - 3177325 - | hypothetical protein TERM 3808 3177559 - 3177587 + g 100 -16.7 -4.15565 | opp_overlap 3177559 CATCACGCCGCACAA CCTGTCGGCCCAG TCG CTGGGCCGGAAGG TTTTGCCATCATGCG TERM 3809 3177587 - 3177559 - G 82 -14.5 -3.30441 | opp_overlap 3177559 CATCACGCCGCACAA CCTGTCGGCCCAG TCG CTGGGCCGGAAGG TTTTGCCATCATGCG Pnap_3011 3177886 - 3179100 + | acetylornithine aminotransferase TERM 3810 3179309 - 3179278 - g 71 -8.6 -3.87075 | ATGATTTTCGAGAAA GCCTCGACCCGCAC CCGC GTGAGCTTCGAGGC CGGCATGTACCAGCT Pnap_3012 3179110 - 3180039 + | ornithine carbamoyltransferase TERM 3811 3180106 - 3180134 + F 89 -13.9 -3.55761 | opp_overlap 3180106 TGCTCCATTTTGAAA CAGGCTATGTCAG CAA CTGGCACAGCCTG TTTCGCGCATGGGTG TERM 3812 3180134 - 3180106 - f 89 -13.9 -3.57144 | opp_overlap 3180106 TGCTCCATTTTGAAA CAGGCTATGTCAG CAA CTGGCACAGCCTG TTTCGCGCATGGGTG Pnap_3013 3180309 - 3181829 + | aldehyde dehydrogenase TERM 3813 3181857 - 3181901 + F 100 -18 -3.12351 | overlap 3181858 AGACGAGCTTGTTGA GTCGGCCGGGGGCCGG-ATGGT TTG ACCATTCCGGCCCCTGTCC-AC TTCAGTGTCAACCGG TERM 3814 3182469 - 3182446 - g 74 -5.8 -4.42386 | opp_overlap 3182453, overlap 3182447 3182448 CGGCGAGCCATAAAA CCGACACGGC CGCA GCCGGCCCGG ATGCGCACTTGTCAT TERM 3815 3182665 - 3182627 - g 73 -6.7 -4.2558 | gap 1, overlap 3182639 3182642 CAGCCTGCAGCAAAA CGATGAAG-TCAAGCAGC TCAA GCTGCGCGAACTGCACCG ATATGTCGAGCGCAA Pnap_3014 3181950 - 3182744 + | hypothetical protein Pnap_3015 3182741 - 3183742 + | hypothetical protein Pnap_3016 3183791 - 3184156 + | hypothetical protein Pnap_3017 3184927 - 3184175 - | short-chain dehydrogenase/reductase SDR TERM 3816 3184995 - 3184969 - H 71 -7.2 -3.97368 | opp_overlap 3184969 3184970, overlap 3184970 TGCGGAAGGGAGAAA CCGGTGGCTC GCTGCCA GAGCCGCCGA TTTTGCACGAGCAGC TERM 3817 3184969 - 3184995 + H 74 -7.2 -4.07568 | opp_overlap 3184969 3184970, overlap 3184970 TGCGGAAGGGAGAAA CCGGTGGCTC GCTGCCA GAGCCGCCGA TTTTGCACGAGCAGC TERM 3818 3185256 - 3185268 + G 73 -3.3 -4.70659 | overlap 3185257 GCGACACCGCCTATT CGCAG GAG CTGCA TTTTTCACTCTCGCC TERM 3819 3185777 - 3185798 + G 71 -9.4 -3.73224 | overlap 3185756 GCCGACGCCTCGCCG GTTCGCGC TATCCT GCGCGAGC TTTCCTGAACCATAA Pnap_3018 3185135 - 3185806 + | cyclase family protein TERM 3820 3186162 - 3186138 - g 82 -14.3 -3.33737 | CATCAACCTCTACAA GGTGCTGAGCG CGG CGCTCAGCATC GCGAGTGAAGATGCG Pnap_3019 3185827 - 3187104 + | kynureninase Pnap_3020 3187106 - 3187954 + | tryptophan 2,3-dioxygenase TERM 3821 3187968 - 3187990 + F 75 -6.4 -4.56775 | overlap 3187957 3187956 AGGCGGCTTGTGGAA GCCATTTT CAAGCAA AAAATGGC TTTTTCGCACGACGT Pnap_3021 3188242 - 3188862 + | hypothetical protein TERM 3822 3189167 - 3189177 + G 100 -4.6 -5.61596 | overlap 3189151 CGCATGCGCGTGGAT GTCG CTG CGGC TTTTTTTGTACGCGT TERM 3823 3189850 - 3189832 - g 74 -2.2 -4.82901 | overlap 3189837 TTCGGTGCAGAAAAA GCAGATCG AGG CGGACCGC GAAACCAGGGTCAAG TERM 3824 3190194 - 3190178 - g 72 -8 -4.1822 | GCTGATGCCAAGAAA TCAGCC GCCCT GGCTGA AGCCGAGGGGATTGC Pnap_3022 3188888 - 3190600 + | band 7 protein Pnap_3023 3191981 - 3190704 - | monooxygenase, FAD-binding TERM 3825 3191510 - 3191485 - G 76 -11.1 -3.73775 | gap 1, opp_overlap 3191485 TCGACCTTCAGCAAA GGCGC-CAGCAG CGC CGGCTGCGCGCC TGTTGCATCCTCCGG Pnap_3024 3195021 - 3192052 - | aconitate hydratase TERM 3826 3195812 - 3195827 + G 72 -4 -4.56597 | TCTTGCCGCTCAAGC TCGAAG GCGA TTTCGA TTTTTCCGCAGAAGC Pnap_3025 3195100 - 3196515 + | peptidase U32 Pnap_3026 3196512 - 3196742 + | hypothetical protein TERM 3827 3196811 - 3196826 + T 100 -7.5 -5.4505 | opp_overlap 3196811 CAAACATAAAAAAAA GCGGC CCGAAA GCCGC TTTTTTATTGAAAGG TERM 3828 3196826 - 3196811 - T 100 -8.2 -6.15717 | opp_overlap 3196811 CAAACATAAAAAAAA GCGGCC CGAA AGCCGC TTTTTTATTGAAAGG Pnap_3027 3199465 - 3196850 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 3829 3197664 - 3197703 + g 100 -17.2 -3.55444 | GAGGCATCGCTCAGC TCGAACGCCTGCTCGACC TTCA GGTCGGGCAAGCCTTCGA TTTCGAGGATGCGGC TERM 3830 3197760 - 3197728 - G 71 -6.2 -4.36914 | opp_overlap 3197753 TGCGGCCCGAGAAAA TGTTGACCTTGCCC TGCTT GGCCACGGTCAGCA AGCCGGCCTTGATGG Pnap_3028 3200211 - 3199540 - | hypothetical protein TERM 3831 3200045 - 3200073 + g 78 -3.2 -5.00616 | gap 1, overlap 3200070 AATGCGGTCTTGCCG GCAG-CAGATTTG GCAA CAGGTTTGTCTGC TTTTTTGGAAGCGGC TERM 3832 3200095 - 3200116 + g 75 -3 -4.94992 | gap 1 GGAAGCGGCAGGTTT GGC-GACAG TCGTT TTGTCAGCC TTTTTATCGGTTTCA Pnap_3029 3201230 - 3200241 - | HpcH/HpaI aldolase TERM 3833 3200386 - 3200368 - G 72 -7.4 -4.1196 | overlap 3200359 AATTTACCGTCAAAA CTGATGGG CGC CCAATCAG CACGAGCGCCAGCAG TERM 3834 3201194 - 3201184 - G 93 -8.2 -5.04385 | CACACCGGCAAAAAA GCCG TGG CGGC CTGGGCGCCCAAAAG Pnap_3030 3202311 - 3201325 - | malate dehydrogenase Pnap_3031 3202526 - 3203386 + | UbiC transcription regulator-associated domain-containing protein Pnap_3032 3203516 - 3203962 + | succinate dehydrogenase, cytochrome b subunit Pnap_3033 3204039 - 3204404 + | succinate dehydrogenase, cytochrome b subunit TERM 3835 3204902 - 3204865 - g 95 -10.5 -4.60889 | gap 1, overlap 3204855 AACTACGGCGAAAAA CCGGTCCAGCGCGCCTGC GCC GCAGCCG-ACCGCACCGG CCACGCCATGCTGCA TERM 3836 3205814 - 3205790 - g 83 -9.1 -4.37092 | overlap 3205791 ATGCCGCCGACAAAA CCCTGGCCCGC ATT GCGCGCCTGGA CAATGCGACCGATGG TERM 3837 3205863 - 3205888 + G 78 -14.7 -3.01712 | opp_overlap 3205857 GGCCAATGACCTGCG CGCCGCCATGC AGCA GCATGCCGGCG TGTTCCGCACCCAGG Pnap_3034 3204466 - 3206259 + | succinate dehydrogenase, flavoprotein subunit Pnap_3035 3206303 - 3207007 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein TERM 3838 3207079 - 3207060 - g 70 -12.2 -3.14344 | opp_overlap 3207073, overlap 3207074 GATTTGCTGGATGAA CGCAGCTT GAGC AAGCTGCG GTGGCGCTGCCGCCG Pnap_3036 3207030 - 3207338 + | hypothetical protein TERM 3839 3207883 - 3207843 - g 74 -12.5 -3.28416 | opp_overlap 3207849, overlap 3207846 CAGCACCGACATCAA CAATCCGGCCCACCGCGAC ATC GCCGCGATTCGCCTGATTG CCAAAATGCCAACGC gltA 3207373 - 3208683 + | type II citrate synthase TERM 3840 3208741 - 3208715 - f 100 -14.5 -4.18197 | gap 1, opp_overlap 3208715 AGGCTTTAGCCAAAA GCCCGCCGAATG GGAA CAT-CGGCGGGC TTTTTCAATGCAATT TERM 3841 3208715 - 3208741 + F 100 -14.5 -4.67011 | gap 1, opp_overlap 3208715 AGGCTTTAGCCAAAA GCCCGCCGAATG GGAA CAT-CGGCGGGC TTTTTCAATGCAATT Pnap_3038 3208913 - 3209878 + | LysR family transcriptional regulator TERM 3842 3209912 - 3209892 - f 83 -9.7 -4.18697 | overlap 3209904 AAAATCACCTCAAAA CCACGAAGG AAA CCTCCATGG GACGCACCCTCTACG Pnap_3039 3209909 - 3211360 + | isopropylmalate isomerase large subunit TERM 3843 3211425 - 3211384 - g 76 -5.7 -4.65895 | overlap 3211385 3211399 GTCCGTATGCAAAAA TTCACCGTACACCAAGGCC TCGT GGCCCCGATGGACCGCGAG AACGTCGATACCGAC leuD 3211375 - 3212025 + | isopropylmalate isomerase small subunit Pnap_3041 3212099 - 3213169 + | 3-isopropylmalate dehydrogenase TERM 3844 3213342 - 3213399 + F 74 -8.1 -3.93218 | opp_overlap 3213343 3213352, overlap 3213342 3213343 AACGACCACCATTAA AGGCTGACAAGCCCGGTTCGTCGTGCC CACC GGCTCGATGAGCCGGGCCAAAAAGCCG ATTTTTTTCGTACTT TERM 3845 3213342 - 3213400 + F 87 -2.1 -5.5943 | gap 1, opp_overlap 3213343 3213352, overlap 3213342 3213343 AACGACCACCATTAA -AGGCTGACAAGCCCGGTTCGTCGTGCC CACC GGCTCGATGAGCCGGGCCAAAAAGCCGA TTTTTTTCGTACTTT TERM 3846 3213398 - 3213343 - f 82 -11.6 -3.80841 | opp_overlap 3213342 3213342 3213343, overlap 3213352 ACGACCACCATTAAA GGCTGACAAGCCCGGTTCGTCGTGCC CACC GGCTCGATGAGCCGGGCCAAAAAGCC GATTTTTTTCGTACT TERM 3847 3213343 - 3213398 + F 71 -11.6 -2.94304 | opp_overlap 3213343 3213352, overlap 3213342 3213342 ACGACCACCATTAAA GGCTGACAAGCCCGGTTCGTCGTGCC CACC GGCTCGATGAGCCGGGCCAAAAAGCC GATTTTTTTCGTACT TERM 3848 3213389 - 3213352 - f 100 -16.9 -3.35327 | opp_overlap 3213343 3213342 3213342, overlap 3213343 ATTAAAGGCTGACAA GCCCGGTTCGTCGTGCC CACC GGCTCGATGAGCCGGGC CAAAAAGCCGATTTT Pnap_3042 3213429 - 3214568 + | aspartate-semialdehyde dehydrogenase TERM 3849 3214590 - 3214579 - f 74 -2.2 -5.03314 | CGTAGGCTCAAAAAA CCAG GGAA CTGA CGACATACAATCGGG TERM 3850 3214718 - 3214757 + F 74 -3 -4.85599 | overlap 3214705 3214718 CTTGTCAGTCCCTGA CCTTGATGTTAAGGTT GTTTCTCA AAAATTAGCATCAAGG TTTTTGTGCGCTCAA Pnap_3043 3214820 - 3217432 + | putative transmembrane protein TERM 3851 3217521 - 3217535 + G 71 -11.4 -3.53012 | opp_overlap 3217520 3217530 GCAGCGCTTACGAAG GCTGGC AAA GCCAGC TTTCGGGCAAGACGG TERM 3852 3218182 - 3218192 + G 78 -4.6 -4.7878 | overlap 3218179 CGCACCCACCTTCTC GCCT GAC GGGC TTTATTTTCTGGGTC Pnap_3044 3217475 - 3218269 + | tRNA pseudouridine synthase A TERM 3853 3218571 - 3218549 - g 71 -9.1 -3.73775 | TTCATGGTGATGAAA CGCCTGAAG CCTGC CTGCAGGCG GGCCGGCCGTTCCTG Pnap_3045 3218266 - 3218991 + | phosphoribosylanthranilate isomerase TERM 3854 3219287 - 3219255 - g 71 -11.4 -3.49771 | overlap 3219253 ACAAGATCAACAACA CCAT-CGGCCAGGCCA TGC TGGCCCG-CCGCATGG GCAAGCAGCGCATCA Pnap_3046 3218969 - 3220273 + | tryptophan synthase subunit beta Pnap_3047 3220270 - 3221088 + | tryptophan synthase subunit alpha Pnap_3048 3221248 - 3222120 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit TERM 3855 3222218 - 3222200 - f 85 -4.6 -5.17488 | opp_overlap 3222202, overlap 3222202 AAGAGCAAAAGAAAA GACATCAT GGG ATGATGTG GCTTATCGAAAATTG TERM 3856 3222216 - 3222202 - f 74 -7.2 -4.18807 | opp_overlap 3222202, overlap 3222200 GAGCAAAAGAAAAGA CATCAT GGG ATGATG TGGCTTATCGAAAAT Pnap_3049 3222216 - 3222920 + | peptidase S16, lon domain-containing protein TERM 3857 3223175 - 3223158 - g 72 -4.1 -4.57073 | gap 1 GAGCGCCGGGAAAAA CTCGGCGC CCT GCG-CAAG CACCAGGCAGACGGC Pnap_3050 3223068 - 3224633 + | lysyl-tRNA synthetase Pnap_3051 3224962 - 3225579 + | hypothetical protein Pnap_3052 3226852 - 3225668 - | patatin Pnap_3053 3228868 - 3226937 - | hypothetical protein TERM 3858 3228137 - 3228125 - G 76 -6.2 -4.57569 | opp_overlap 3228130, overlap 3228127 GTACTTGGTGAAAAA GGCC ACGTA GGCC CAGTCGGTATGCCGG TERM 3859 3229154 - 3229140 - g 72 -4.2 -4.63542 | CAGAACCCTCAAAAA GCCG TCAATAT CGGC ATCAAATCAGGCTCT Pnap_3054 3228912 - 3229223 + | hypothetical protein Pnap_3055 3229220 - 3229729 + | hypothetical protein Pnap_3056 3230810 - 3229752 - | glycoside hydrolase family 3 protein TERM 3860 3230842 - 3230878 + r 95 -6.5 -5.36441 | opp_overlap 3230842, overlap 3230843 3230844 TAACTATTAAATTGA TAGCTGCTTGCGCAGGT TCT GCCTGCGCAAAAGCCTA TTTTTTCTCTACAAC TERM 3861 3230843 - 3230876 + r 74 -6.7 -4.31943 | gap 1, opp_overlap 3230842, overlap 3230842 3230844 AACTATTAAATTGAT AGCTGCTTGCGCAGGT TCT GCCTGCGCAAA-AGCC TATTTTTTCTCTACA TERM 3862 3230844 - 3230875 + r 71 -10.2 -3.18081 | gap 1, opp_overlap 3230842, overlap 3230843 3230842 ACTATTAAATTGATA GCTGCTTGCGCAGGT TCT GCCTGCGCAAA-AGC CTATTTTTTCTCTAC acpS 3231268 - 3230876 - | 4'-phosphopantetheinyl transferase Pnap_3058 3232098 - 3231268 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 3863 3231414 - 3231379 - G 76 -15.4 -2.53263 | opp_overlap 3231382 CGCATGGCCAATCGA GACTTCCAGCACGCCG GGCA CGGCGCGCAGGAATTC GCTCAGGTTGTCGCG TERM 3864 3231382 - 3231411 + g 75 -13.5 -3.08471 | opp_overlap 3231379 ATGGCCAATCGAGAC TTCCAGCACGCCG GGCA CGGCGCGCAGGAA TTCGCTCAGGTTGTC Pnap_3059 3232872 - 3232123 - | DNA repair protein RecO Pnap_3060 3233994 - 3232921 - | GTP-binding protein Era Pnap_3061 3234751 - 3234050 - | ribonuclease III TERM 3865 3234396 - 3234416 + g 81 -4.5 -5.00616 | overlap 3234397 ACCGCTTCCAGCGCA TCGGCCAGC ATC GAAGGCCGG TTTTTTCCGCCAGAC Pnap_3062 3235093 - 3234752 - | putative transmembrane protein Pnap_3063 3236140 - 3235163 - | signal peptidase I TERM 3866 3235513 - 3235532 + g 86 -6.4 -5.08601 | overlap 3235506 GCGTCTTCGGCAGCG GCTTGCCA TTGA TGGTGAGC TTTTTGTTCAGGTAG Pnap_3064 3237951 - 3236140 - | GTP-binding protein LepA TERM 3867 3237198 - 3237184 - G 76 -9.2 -4.05446 | GCCGGCAATCACAAA GCCGAC CTC GCCGGC TTCAAGCGCCTGGCG TERM 3868 3238047 - 3238023 - R 100 -14.3 -5.47914 | AAAAACCATAAAAAA GGGCGCGTC TTGCAGT GACGCGCCC TGAACCAACAATCTA Pnap_3065 3239767 - 3238292 - | protease Do TERM 3869 3238327 - 3238355 + g 73 -2.9 -4.6902 | overlap 3238329 TGACAAATTGCGCCA GTTCACCGCGCCG GAC CAGCACGGTGATG TTTTTGGACTTGTCA TERM 3870 3238329 - 3238353 + g 76 -9.9 -3.95535 | overlap 3238327 ACAAATTGCGCCAGT TCACCGCGCCG GAC CAGCACGGTGA TGTTTTTGGACTTGT Pnap_3066 3240933 - 3239890 - | putative sigma E regulatory protein, MucB/RseB TERM 3871 3239937 - 3239922 - G 74 -4.6 -4.56597 | GCCCGCTGGCAAAAA GCTGCA AGGT TGCGGC AGGGACTTCACCCAC Pnap_3067 3241576 - 3240935 - | anti sigma-E protein, RseA TERM 3872 3241154 - 3241119 - G 71 -9.6 -3.72027 | gap 1, opp_overlap 3241122 ATTTGCGATGAAGAA GCCTGCGCCAGC-TGCG GCA CGGACGCCGGCGCCAGC AGCCCGGACGCATTC TERM 3873 3241585 - 3241603 + r 80 -4.5 -5.10461 | overlap 3241587 ATTTCATGAGGTGTG TGGGCAG CGGGT CTGCCGA TTTTTATTCACTGAC Pnap_3068 3242294 - 3241659 - | RNA polymerase sigma factor RpoE TERM 3874 3241998 - 3242009 + g 78 -3.6 -5.04987 | GGGATTTCGCTTCAG GTCC ATCA GGGC TTTTTTGGCGGTGTT Pnap_3069 3242827 - 3242291 - | hypothetical protein Pnap_3070 3244118 - 3242874 - | beta-ketoacyl synthase TERM 3875 3243959 - 3243984 + g 79 -11.1 -3.96216 | TGTTGAAACCCTTGA CCTCGCCTGCG AACT TGCAGGCCAGG TTGTTTGCATCAAAA TERM 3876 3244168 - 3244140 - R 100 -6.1 -5.75945 | gap 1, opp_overlap 3244140 ATCCTGGAAAAAAAA CCTGAGAAGACC GAAATT GGCCTT-TCAGG TTGATGACGGCAAAG Pnap_3071 3244434 - 3244195 - | acyl carrier protein Pnap_3072 3245346 - 3244600 - | 3-oxoacyl-(acyl-carrier-protein) reductase Pnap_3073 3246293 - 3245343 - | malonyl CoA-acyl carrier protein transacylase Pnap_3074 3247028 - 3246384 - | hypothetical protein Pnap_3075 3248391 - 3247006 - | BNR/Asp-box repeat-containing protein TERM 3877 3247171 - 3247156 - G 74 -4.6 -4.64676 | overlap 3247158 3247169 GTAGGGGTAAGAAAA CTCCTG CAAA CAGGTG GCCGAGCCGCACAGC TERM 3878 3247906 - 3247923 + g 71 -5.5 -4.36089 | ATCGTCAGGCATGCG GGCTATC ACTG GATTGCC TATTTTTTTAACATA Pnap_3076 3249421 - 3248444 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 3879 3249261 - 3249281 + g 73 -12.5 -3.15544 | CTGCTGGTCACGTCG GGCGCTGCA AAG TGCCGCGCC TTGATGCCGGTGCGC Pnap_3077 3250538 - 3249426 - | fatty acid/phospholipid synthesis protein PlsX TERM 3880 3249687 - 3249699 + g 76 -5.5 -4.56597 | opp_overlap 3249696 3249697, overlap 3249685 GCCGTTGTAGCGCCG GTGGT CAA ACCGC TTTTTAAACGCAGAC TERM 3881 3250605 - 3250583 - R 100 -12 -4.68908 | TTTAGGCAAAAGAAA GGCCCGCA GGATGAG TGCGGGCC AGCGCTTGGGACGTG rpmF 3250805 - 3250623 - | 50S ribosomal protein L32 Pnap_3079 3251582 - 3251028 - | hypothetical protein TERM 3882 3251845 - 3251798 - g 81 -12.6 -3.72893 | gap 1, opp_overlap 3251823 CACTGCCGCATGAAA CGCCGCGCGCGCTTGCCGAACGC CTG GCGCTGGCCAAG-GCCCGCGCCG TGGCCAGCGAATTCC TERM 3883 3252128 - 3252090 - g 71 -6 -4.35524 | gap 2, overlap 3252093 TGGCGAAATTGAAAA CTACCTGCGC-GCCG-AG CAGCC CTACGACTGCGCCGGCAG CGCCAAAAGCGAAGG Pnap_3080 3251608 - 3252279 + | maf protein TERM 3884 3252569 - 3252525 - g 100 -7.9 -5.252 | gap 1 GAGGTTCACAAAAAA GGCGACCA-CAGCGGCCA CTTTGACGCC CGGCCACTGCTGGTGGCC GCCCTGGAAGGCCGC Pnap_3081 3252276 - 3253040 + | putative transmembrane protein TERM 3885 3253086 - 3253070 - T 100 -13.7 -5.24531 | opp_overlap 3253070 AGTTTCCACAAAAAA GCCCGCA TTT TGCGGGC TTTTTTCAAGTCCAT TERM 3886 3253070 - 3253086 + T 100 -13.7 -5.05782 | opp_overlap 3253070 AGTTTCCACAAAAAA GCCCGCA TTT TGCGGGC TTTTTTCAAGTCCAT Pnap_3082 3254193 - 3253111 - | peptidase S49 TERM 3887 3253507 - 3253493 - G 71 -9.2 -3.72576 | opp_overlap 3253477 3253497 CCGGCGGTCAGCAAA CGGCGC TCA ACGCCG AGCTTGTCCATCAGG Pnap_3083 3254580 - 3254215 - | Rieske (2Fe-2S) domain-containing protein Pnap_3084 3255255 - 3254596 - | HAD family hydrolase Pnap_3085 3256506 - 3255310 - | RluA family pseudouridine synthase TERM 3888 3256964 - 3256990 + H 100 -18 -3.83026 | ACGCCCAGACTGACA CTGGCCGACCGA TTT TCGGCCGGCCAG TTTGCTGTCAAAAGC TERM 3889 3259166 - 3259139 - g 76 -13.4 -3.15544 | gap 1 CCCGAGCGCCAGGAA CGGCCGGAACGCC AGG AGCGC-CCGGCCG GCGAGCCCCGCGCCG TERM 3890 3259706 - 3259718 + G 71 -9.1 -3.72576 | GACGAGGCCGGCAAT CCGGT CGC ACCGG TTTCATCGACCGACG Pnap_3086 3257099 - 3260329 + | ribonuclease TERM 3891 3260330 - 3260317 - T 70 -6.7 -4.07568 | GCTGCCGTTTGAAAA GTCAG CGAA CTGAC GACCCGGCCTGCAAC TERM 3892 3260394 - 3260415 + T 100 -12.3 -5.75342 | opp_overlap 3260394 ACGGCACAAGCCAAA GCCGCATCT TCCG GGATGCGGC TTTTTTTTGCGCGCG TERM 3893 3260415 - 3260394 - T 82 -11.6 -3.80893 | opp_overlap 3260394 ACGGCACAAGCCAAA GCCGCATC TTCCGG GATGCGGC TTTTTTTTGCGCGCG Pnap_3087 3261861 - 3260572 - | HemY domain-containing protein TERM 3894 3260625 - 3260674 + g 83 -15 -3.40403 | gap 1, opp_overlap 3260641 CGGCTTCATCCTCGC GCTGCTCGGCCAGCAAGGCCAGG GCGCG CCAGGCCTTGC-GGTGCAGCAGC TTGTCCTGCAAGGCG TERM 3895 3261153 - 3261128 - G 79 -11.2 -3.86346 | gap 1, opp_overlap 3261127 3261126 GCAGTCGGCGAGAAA GCGCGG-TGCT TGGCC AGCAGCCGCGC GGTTTCCAGCGCCTG TERM 3896 3261487 - 3261515 + g 82 -3 -5.14563 | gap 1 GTGGCCGGTGGGATG GCCGGATGTGTCG GTGG CGACGCC-CAGGC TTTTTTCCTGCGCCA TERM 3897 3261588 - 3261619 + g 70 -7.2 -3.98256 | gap 1, overlap 3261598 CCATCAGGTGGGCCA GCGCGTCCATGAGGG CGC CGTACATGG-CGCGC TCTTTTTGCTGCGCG TERM 3898 3261598 - 3261621 + g 100 -10.2 -4.72272 | overlap 3261588 GGCCAGCGCGTCCAT GAGGGCGCCG TACA TGGCGCGCTC TTTTTGCTGCGCGCG Pnap_3088 3263054 - 3261894 - | protein of unknown function DUF513, hemX TERM 3899 3261935 - 3261957 + g 72 -4 -4.62069 | overlap 3261938 GCGCGGCCATGGTTT CGTCGAGCCG GGG CAGTTCGGTG TTTTTGAGCTGGCCC TERM 3900 3262162 - 3262149 - G 78 -5.2 -4.72272 | TTCGCGCAGGAAAAA CGCC TGGTCG GGCG CCAGCAGCGCCGCTT Pnap_3089 3263914 - 3263051 - | uroporphyrinogen III synthase TERM 3901 3263154 - 3263127 - G 71 -11.2 -3.48824 | gap 1, overlap 3263125 GACTCCACAACAACA CCCCAGCCG-GCG GCC CGCACGGCCTGGG CAATCCGGGGATGGG Pnap_3090 3264923 - 3263928 - | porphobilinogen deaminase TERM 3902 3264187 - 3264160 - G 71 -9.1 -3.72576 | gap 1 CCGGCGGTCACGAAA GCGGCCAGCGGC ATCGA GCAGCT-GCCGC CCATGGCGCGCGAGA TERM 3903 3264629 - 3264582 - G 70 -7.4 -4.053 | ATCATTGGACACAAA GGCATCGTGCGGGTCTTCGCGC TCCA GGACGCAGGCCAGCGCGAAGCC TTCGGGCAGGTCCAT TERM 3904 3265306 - 3265273 - g 72 -11.7 -3.31792 | CCAGGAGGCCGACAA GGCGCTCAAGGCCCT GCTC AAGGACTTGAGCGGC GACCAGACCGTCAGC TERM 3905 3267535 - 3267547 + G 74 -4.7 -4.57073 | opp_overlap 3267535, overlap 3267509 3267506 GCTGAAAAAAATGTA CCGCC AGT GGCCG TTTTTCCGCACCCTG Pnap_3091 3264965 - 3267913 + | phosphoenolpyruvate carboxylase Pnap_3092 3268035 - 3268295 + | hypothetical protein TERM 3906 3268481 - 3268495 + G 86 -7 -5.01732 | opp_overlap 3268471, overlap 3268483 ACCGACGCCCAGTCG CTGCGC CAC GCGCCG TTTTTTCCGCGCGTT TERM 3907 3269393 - 3269361 - g 70 -10.4 -3.58536 | AAACGGAGCGCGAAA CGGCCGAAGCCGTC GTCAA GGCGGCCCAGGCCG TACCCGACAGCCTGC TERM 3908 3269407 - 3269437 + G 72 -11.8 -3.37796 | gap 1, opp_overlap 3269430 CGTACCCGACAGCCT GCCGGCGG-ACGC CGCCGA GCGAACCGCCGGC TTCTACCTGATCGGC TERM 3909 3269645 - 3269673 + G 76 -10.9 -3.76402 | GCGCTGTTCCTGCTG GCCGGACCCGCCT TCG AGGCGGCTTCAGC TTTCGTGCATCGCCT TERM 3910 3269984 - 3270001 + G 78 -4.8 -4.77036 | gap 1, overlap 3269965 CGTTATCCGGCGCCA GC-CGGC TGCCC GCCGCGC TTTTTGCTGCTGCAC TERM 3911 3270853 - 3270904 + G 77 -2.3 -5.00616 | opp_overlap 3270881, overlap 3270853 3270854 GGCCGGGCCGCTGCT G-GGCGCGCTGGCGG-GCCTGGTGC CAACAC GCAC-GGGCATTGCCTG-GCGCCAC TTTTTTCGCGGCGGG TERM 3912 3271279 - 3271326 + G 85 -6 -5.0133 | gap 1, opp_overlap 3271291, overlap 3271267 GGCGCATGCGCTGCA CGCCGGG-GACAAGCGCTACCTC TTG GCGCTGGCGCGCGACACCTGGCG TTTTTTCGAGCGCTG TERM 3913 3273917 - 3273888 - g 74 -10 -3.78775 | gap 1, overlap 3273907 TGCGCGACCAGGAAA CCGCCAGCGCCGA AAAAA TC-GCGCTGGCCG GGTTGGCGCGGGTCG TERM 3914 3274308 - 3274340 + G 76 -6.1 -4.62069 | overlap 3274309 ACCCGGCCTTCGAGC ACTGGCTGCTGCAGG ACA TCGACAGCGGCCAGA TTTTTCCGCTGGCGC Pnap_3093 3268301 - 3276496 + | glycosyltransferase 36 TERM 3915 3277186 - 3277166 - g 81 -13.3 -3.73647 | GGCATGTACGAAGAA CTCGGCCAG GGC CTGGCCAAG CGCAGCCAGTTCGGG Pnap_3094 3276710 - 3278569 + | hypothetical protein Pnap_3095 3279889 - 3278708 - | hypothetical protein TERM 3916 3279170 - 3279193 + g 91 -3 -5.5112 | opp_overlap 3279170 3279169, overlap 3279171 GATCTGCCCGGAAAT CTCATGCAGC GCCT GCAGCGTGAC TTTTTTCTTGCTCAG TERM 3917 3279332 - 3279281 - G 80 -5.8 -4.69464 | gap 1, overlap 3279283 AAAATAGGTCAAAAA CACCACCACGGTCA-CCTGCCCG ATCAGCG CGAGCAGGCCGACGGTGCCGGTC CACAGATAGTCCTTG TERM 3918 3279330 - 3279283 - G 71 -8.4 -3.9442 | gap 1, overlap 3279281 AATAGGTCAAAAACA CCACCACGGTCA-CCTGCCCG ATCAGCG CGAGCAGGCCGACGGTGCCGG TCCACAGATAGTCCT TERM 3919 3279830 - 3279808 - G 74 -13.4 -2.94045 | opp_overlap 3279802 3279799, overlap 3279805 GCATGTGAAGAAGCA GGCGTTCCGG CTC CGGGAACGCC GTGACATCTTCTTCC Pnap_3096 3280778 - 3280035 - | response regulator receiver protein TERM 3920 3280550 - 3280532 - G 70 -11.6 -3.13403 | overlap 3280530 GCGCGGTGACGAACA CCACGGCC GGC GGCCGGGG CAAGCCAGCCAGGGT Pnap_3097 3281893 - 3280775 - | histidine kinase internal region TERM 3921 3281005 - 3281021 + g 70 -7.9 -4.07568 | overlap 3280978 TGGCGCTGGGCTCCA CGCCATG CCG CACGGCG TTTTCCACCAGCGGC TERM 3922 3281254 - 3281283 + g 75 -13.5 -3.01791 | overlap 3281263 CCTTGGCCGGCTCGG CGCGCACCAGCGC AATC GCGCTGTTGAGCG TGTTGAACAGAAAAT TERM 3923 3281348 - 3281298 - G 74 -4.6 -4.66537 | gap 2, overlap 3281299 GTGTTGAACAGAAAA TGCGG-C-CGGATGCGCGACTG CAACTCGGC CAGCCGCGCTGCCGTGGCCGCT GGCGTCCTGGCCTTG TERM 3924 3282839 - 3282853 + G 74 -5.7 -4.42386 | opp_overlap 3282833, overlap 3282835 TGCACATCAGCCGCT TCAGC GAAGA GCTGA TTTTGTGGATGAGCC TERM 3925 3282985 - 3282939 - g 88 -6.3 -5.18726 | overlap 3282941 3282971 GCCGCAGAAGAAAAA CCCCGACGTGCCCGAACTCGC GCGCG GCAAGACCGGCCGCGTCGTCG GCCACCTGATGGGCC TERM 3926 3283032 - 3283018 - g 76 -11.4 -3.73953 | ATCACGCTGATGAAA GGCCAG CCG CTGGCC TACAACAAGGACAAC Pnap_3098 3282049 - 3283458 + | argininosuccinate lyase Pnap_3099 3283811 - 3283530 - | hypothetical protein Pnap_3100 3284064 - 3283786 - | hypothetical protein TERM 3927 3284067 - 3284090 + H 83 -7.6 -4.57341 | ACTCAATTTTCATTA TTCAAATTGT AGTA ACGATTTGAA TTTTTGCAAAGGCTT Pnap_3101 3284094 - 3284378 + | hypothetical protein TERM 3928 3284420 - 3284404 - f 74 -9.5 -3.65201 | CAACACCTCTAATAA TTGTTGC AGT GCAACAA AAACTTCCCAAGCCC TERM 3929 3284509 - 3284484 - f 74 -7.5 -4.11183 | overlap 3284481 CTGCAGCATAAACAA TCCCACACGGC ATTG GCTGTGCAGGA AACCGATTTGCCCAG TERM 3930 3285018 - 3285005 - g 84 -2.3 -5.38497 | overlap 3285015 ACGCAAACCAAAAAA GCGGT TGAA ACGGC CCAGTCGAACTTCAC Pnap_3102 3284543 - 3285088 + | phasin family protein TERM 3931 3285116 - 3285145 + F 100 -25.1 -3.54424 | CTTCGGGCAGTCACC CGCCAACGGCGCC TTCG GGCGCCGTTGGCG TTTCAGGGCCTGAAC TERM 3932 3286236 - 3286260 + G 76 -9.9 -3.8505 | overlap 3286256 GCCCGGAACGCGGCG TGCTGGCGCAG TTC CGGCACCAGCA TTTCCTGCTGTTCCT Pnap_3103 3285215 - 3286867 + | hypothetical protein TERM 3933 3286899 - 3286937 + F 81 -12.7 -3.01712 | opp_overlap 3286899 CCGACAAGTACAAAA TCTATGCAAATTAACCA ACATA TGGTAAATTTGCATGGA TGTTAACCAGAAAAA TERM 3934 3286937 - 3286899 - f 95 -10.5 -4.58466 | opp_overlap 3286899 CCGACAAGTACAAAA TCTATGCAAATTAACCA ACATA TGGTAAATTTGCATGGA TGTTAACCAGAAAAA TERM 3935 3287221 - 3287245 + G 73 -12.7 -3.23216 | opp_overlap 3287216 3287217 GATTGACCAAGGCCG GCGCCGGGGGC AGC GCACCGGGCGC TTCCTGCTGCTCGGC Pnap_3104 3286937 - 3288106 + | AAA ATPase Pnap_3105 3288249 - 3288908 + | two component transcriptional regulator TERM 3936 3289177 - 3289206 + G 78 -6.3 -4.64766 | gap 1, overlap 3289170 3289165 TTTCCGCTCCACCCG CTCGGCCCTGCCGC CGC GCG-CGGTGCTGGG TTTTTCGGATGTCGA TERM 3937 3289307 - 3289272 - g 70 -10.4 -3.5394 | gap 1, opp_overlap 3289289, overlap 3289291 AAACGCCGCTGCAAA CCGTGCAGATCGCGCAA GAC CTGAGCG-CCCGCACGG CCAGAGCCCGCGCAC TERM 3938 3289446 - 3289396 - g 70 -11.7 -3.21099 | gap 1, opp_overlap 3289400 3289429 3289431 CTGGTGGATCATCAA GCGCTCGCTGGCGCCGATAGAGCG CACG CGCCGCGTCGTCGCCAGCC-GCGC CGCCGATGATTTTTC TERM 3939 3289431 - 3289455 + G 78 -6.3 -4.58395 | opp_overlap 3289396, overlap 3289429 3289400 AGCGCACGCGCCGCG TCGTCGCCAGC CGC GCCGCCGATGA TTTTTCGCCGCTCGA TERM 3940 3290079 - 3290092 + G 78 -3.1 -5.00616 | gap 1, overlap 3290059 3290056 CGGAAAACCGCCCGC GCGTGT TTG AC-CGC TTTTTTCGCGCCAGC Pnap_3106 3288905 - 3290257 + | integral membrane sensor signal transduction histidine kinase TERM 3941 3291391 - 3291353 - g 83 -7.4 -4.59853 | gap 2, overlap 3291354 3291357 TCAATGGTTGAAAAA GGCAGCCCGGCCGACAAG GCGGG CCTG-CAGCCGGGC-GAC GTGATCCGCCAAGTC TERM 3942 3291661 - 3291629 - g 70 -11.9 -3.15544 | overlap 3291638 CTGCAGCCCGACGAA CAGCAGGAAGCTGGC ATT GACAGCGGCCTGCTG GTCCAGCAGGCCAGC Pnap_3107 3290336 - 3291850 + | protease Do TERM 3943 3291863 - 3291887 + F 83 -8.5 -4.50259 | overlap 3291866 TGATTGGGGTTGGCT TGGGCGGGCTT GGA AGGCCCGCTTG TTTTGCTCTGTTTTT TERM 3944 3291866 - 3291884 + F 93 -12.4 -4.31813 | overlap 3291863 TTGGGGTTGGCTTGG GCGGGCTT GGA AGGCCCGC TTGTTTTGCTCTGTT TERM 3945 3292126 - 3292140 + F 72 -11.4 -3.14708 | overlap 3292124 CTCCCCCTGTTTTTT GCGCCA CAT TGGCGC TCTGGTTTTCATTGG Pnap_3108 3292192 - 3293274 + | transposase IS116/IS110/IS902 family protein Pnap_3109 3294636 - 3294034 - | hypothetical protein TERM 3946 3294941 - 3294921 - g 76 -6.8 -4.52873 | overlap 3294923 TCCTTACAAAAATAA TCGCTGCG CTGGC CGCAGCCA CCGCTCTGCAGGCGC TERM 3947 3299530 - 3299553 + G 73 -8.8 -4.00042 | gap 1 TGATGGCGACGCCGC GCGCGGCAGCG CCA CGCTGACG-GC TTATTTGCTGGCCGC TERM 3948 3300232 - 3300213 - g 76 -5.6 -4.62069 | overlap 3300214 CGGCCACGGCAAAAA CCGCCAGC GTGG ACTGGCGC AAGGTCGGGCGCATC Pnap_3110 3294896 - 3300895 + | alpha-2-macroglobulin domain-containing protein TERM 3949 3300883 - 3300933 + F 75 -5.7 -4.67011 | gap 2, opp_overlap 3300898, overlap 3300892 GCGCGTGAAGGTGGA G-GCGGCG-AAGTGAAATTCACC CTTCTCA GGTGAATTTCACTTATGTCACAC TTTTTACATCAAATT TERM 3950 3300892 - 3300922 + F 85 -12.8 -3.51563 | opp_overlap 3300898, overlap 3300883 GGTGGAGGCGGCGAA GTGAAATTCACC CTTCTCA GGTGAATTTCAC TTATGTCACACTTTT TERM 3951 3301419 - 3301433 + F 72 -2.1 -4.9645 | overlap 3301420 ACGGGGTACCCACTT TGACT AATCC AGTCG TTTTCTTGTTCTCAT Pnap_3111 3301453 - 3302793 + | hypothetical protein TERM 3952 3302865 - 3302902 + T 91 -9.9 -4.6644 | gap 1 CGCTCAGTCTCAGCA GCGGCTACTTTGTCGG CAACAGT CCGTCAG-GTAGCCGC TTTTTGCCATGTATT Pnap_3112 3303620 - 3302934 - | hypothetical protein TERM 3953 3303025 - 3303035 + g 72 -4 -4.66987 | CCAAAATAAGTATCG TACA TGA TGTA TTTTATTGCGCTGTC Pnap_3113 3304680 - 3303799 - | hypothetical protein TERM 3954 3303966 - 3303979 + g 81 -3.7 -5.07486 | TGAGCGTGGGAGTCT GCCGG GGCA CGGGC TTTTTGTTCAGAATG TERM 3955 3304206 - 3304188 - G 100 -3.1 -5.84381 | GCACCAAGAAAAAAA GCTCAAT TTCCC ACCGAGC ACGGTACCAATTGAC TERM 3956 3304889 - 3304931 + r 81 -12.7 -3.03124 | gap 1, opp_overlap 3304876 CACCACCGCGTGCTC GCGGATG-CGGCCCATCGTC GCCT GGCGGTGGGCCGTCATCACC TCTTCGCAGCTGACC TERM 3957 3305012 - 3305024 + r 70 -6.9 -4.07568 | overlap 3305004 ACACGCCCCCGGAAT GCTCG CTC CGGGC TTTTGCCCCAGCCGC Pnap_3115 3306287 - 3305181 - | hypothetical protein Pnap_3116 3306969 - 3306301 - | sugar transferase TERM 3958 3306734 - 3306722 - G 77 -2.6 -5.00616 | GTCTTGCGCAAAAAA CGCC CCACC GGCA GAACGCGCGGATCGT Pnap_3117 3308171 - 3306972 - | polysaccharide biosynthesis protein CapD TERM 3959 3307254 - 3307242 - G 76 -5.5 -4.58395 | overlap 3307245 3307246 GTCACTGCTGAAAAA GTAGC AGG GCCAC TTGCGCTGGGCAATC Pnap_3118 3309304 - 3308168 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 3960 3309308 - 3309322 + r 73 -5.6 -4.64383 | CTTCCACATCATTCG CTCTCC TTC GGGGGG TTTTGATTTATCGTT Pnap_3119 3310614 - 3309376 - | glycosyl transferase, group 1 Pnap_3120 3311953 - 3310835 - | glycosyl transferase, group 1 Pnap_3121 3313508 - 3312222 - | hypothetical protein TERM 3961 3312636 - 3312604 - G 83 -7.2 -4.5852 | GAATTCAAATTAAAA TTTGCAATCAAATC ATAAA AATATGATTGCAAA ACACCTTGTACAACA Pnap_3122 3314853 - 3313711 - | LPS biosynthesis protein WbpG TERM 3962 3314594 - 3314561 - G 76 -13.9 -3.1372 | gap 1, opp_overlap 3314560 3314561, overlap 3314559 CAGCCGGCATCAACA TGCACGACCAGGGGCC GCA GGCCCC-GCTCATGCA CTTTCAGTGCGAGAT TERM 3963 3314700 - 3314712 + g 74 -10.5 -3.81146 | opp_overlap 3314700 CCACCATCACAGCAA GGCGC CTG GCGCC TTCTTCATTGGGGAA Pnap_3123 3315615 - 3314854 - | imidazole glycerol phosphate synthase subunit HisF TERM 3964 3314972 - 3314931 - G 100 -10.1 -4.72986 | gap 1 GAGGTCCATGAAAAA TGAACATC-GCGCCAGCGGC TAT GGCACTGGCGCCGGCGTCCA CGGCGGCACGCAGAT TERM 3965 3315124 - 3315136 + g 70 -10.5 -3.62224 | GATTTCACCGGCACC GGCGG CAA CCGCC TTGTTCAGAAAGTCT Pnap_3124 3316225 - 3315617 - | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Pnap_3125 3317481 - 3316222 - | polysaccharide biosynthesis protein Pnap_3126 3318584 - 3317478 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 3966 3319001 - 3318991 - H 70 -5.4 -4.42386 | overlap 3318977 3318976 CGGCGATTTACAAAA TCAC CAT GTGA CGCAATGCCGCGCAG Pnap_3127 3319086 - 3319460 + | hypothetical protein Pnap_3128 3320084 - 3319500 - | putative acetyltransferase WbpD TERM 3967 3319568 - 3319547 - G 71 -5.7 -4.28188 | CATCCAGAACATAAA GCGCGCCGG TGTG CTGGCACAC GCCCTCCCCCTGCCC TERM 3968 3319749 - 3319766 + g 74 -9.8 -3.72695 | GACGATGGTGCAGTT GGCGCC CAGGGT GGCGCC TTTCCTGACCAGGGT Pnap_3129 3321028 - 3320081 - | oxidoreductase domain-containing protein TERM 3969 3320372 - 3320351 - G 74 -2.1 -4.88067 | opp_overlap 3320354 3320355, overlap 3320354 3320355 ATCGATGGACAAAAA CCAGCGCAC ACGG GCGCGTTCG TATTCAAGGTAGCCT Pnap_3130 3322347 - 3321046 - | UDP-glucose/GDP-mannose dehydrogenase TERM 3970 3321165 - 3321214 + g 76 -8.6 -4.11216 | gap 3 GCTCTTTAAGCGTGG CCTGG-CG--GTACTGGTTGTGGCC GAC GGCCACGACCAGCGCATCGACCCGG TTTTCCGCATCCACG Pnap_3131 3323509 - 3322406 - | glycosyl transferase family protein TERM 3971 3322650 - 3322630 - G 76 -9.6 -4.08945 | overlap 3322631 ATGACTGGGGCAAAA GGCGCCGC ACCAG GCGGCGCG TTACCAGGCTGTGCA TERM 3972 3322649 - 3322631 - G 71 -13.1 -3.05046 | overlap 3322630 TGACTGGGGCAAAAG GCGCCGC ACCAG GCGGCGC GTTACCAGGCTGTGC Pnap_3132 3325831 - 3323588 - | exopolysaccharide transport protein family TERM 3973 3324437 - 3324420 - G 86 -6.9 -5.00616 | overlap 3324424 CTGTTGCGCAAAAAA GCCAGGC CCAT GCCCAGC AGCAGGCCAAGCACC TERM 3974 3324946 - 3324927 - G 81 -4.3 -5.00884 | opp_overlap 3324927 AGCTGCGGCAAAAAA TCACTCA AGAAAG CGAGTGA TCTTTCAGCCTCCGC Pnap_3133 3327094 - 3325841 - | polysaccharide export protein TERM 3975 3326134 - 3326116 - G 78 -10.3 -4.08706 | TGCGCACCACATAAA TCTGGCG CGGGT CGCCAGA GGCGGGGTTCACGCC TERM 3976 3326941 - 3326960 + g 70 -7.8 -4.09685 | AAGTGCCGGCATCCG GATTGGCC CACT GGCCGGTC TTTTGCAAACTCCGG TERM 3977 3327062 - 3327037 - G 76 -12.5 -3.44051 | CCGCCAGGACCAGAA CAGGCCAGCGC GCCT GCGCGAGCCTG GAAGTGAAGCCTGAT Pnap_3134 3327881 - 3327333 - | NusG antitermination factor TERM 3978 3328124 - 3328108 - H 77 -3.6 -5.055 | overlap 3328110 3328112 GGAAGCCGGAAAAAA GACAGC GGCTT GCCGCC AGCCCTCCCGGTGAA TERM 3979 3328174 - 3328211 + H 74 -4.3 -4.71828 | gap 1, opp_overlap 3328176, overlap 3328161 3328175 3328176 TTGCTATATTTTTAA TAG-CTATTTATGCATGC GTA GTATGCGCAAATGGCCTA TTTTGTTCATAAAAT TERM 3980 3328242 - 3328259 + H 81 -8.3 -4.35461 | TCAACTTCCACCAGC CCGGCGC CATG GCCCCGG TTTTAGTCCTCTTGC Pnap_3135 3328325 - 3329098 + | putative methyl-accepting chemotaxis sensory transducer Pnap_3136 3329103 - 3329639 + | hypothetical protein Pnap_3137 3329672 - 3331246 + | extracellular solute-binding protein TERM 3981 3331300 - 3331332 + G 73 -3.1 -4.68424 | opp_overlap 3331298, overlap 3331301 3331302 3331320 3331328 GGCATCCGTACAACC GCGTGGCGCTGCTGG CCA CCGGATGCGCCGCCA TTTTTGCGTCGATTC Pnap_3138 3331248 - 3332120 + | hypothetical protein TERM 3982 3332490 - 3332472 - g 75 -3 -4.87665 | overlap 3332476 GCTGATCCAGAAAAA GAATGCGC TCG ACGCGTCC ATCACCGAACTGCGC Pnap_3139 3332176 - 3332886 + | phage shock protein A, PspA Pnap_3140 3332905 - 3334758 + | ATPase central domain-containing protein Pnap_3141 3334793 - 3335251 + | hypothetical protein TERM 3983 3335530 - 3335556 + G 82 -10.8 -4.07568 | opp_overlap 3335553 CCGGCCCTGCGCACG GCGCTGGTGCTC AGC GAGGACAAGCGC TTTTACGAGCACAGC TERM 3984 3335960 - 3335929 - g 81 -13.7 -3.66178 | gap 1, overlap 3335930 GCGCCGAATGCCAAA GCCGCGCAGGTCGC TCAGC GCG-CCTGCGCGGT GATGAAACTGATGCA TERM 3985 3335959 - 3335930 - g 84 -17.2 -2.79492 | gap 1, overlap 3335929 CGCCGAATGCCAAAG CCGCGCAGGTCGC TCAGC GCG-CCTGCGCGG TGATGAAACTGATGC TERM 3986 3336322 - 3336338 + G 91 -6.5 -5.36441 | overlap 3336286 GCGCTGCGCCAGCCC GGCTCGA CCC TCAAGCC TTTTTTGTATGCGCA Pnap_3142 3335287 - 3337515 + | penicillin-binding protein 1C Pnap_3143 3338028 - 3337543 - | MarR family transcriptional regulator TERM 3987 3338383 - 3338373 - g 76 -8.2 -4.11484 | opp_overlap 3338376, overlap 3338374 GGGAATCGGTGAAAA GGCC CGT GGCC GTGCGGTCTATACCG Pnap_3144 3338173 - 3339375 + | salicylate hydroxylase Pnap_3145 3339416 - 3340471 + | cupin 2 domain-containing protein Pnap_3146 3340503 - 3341210 + | fumarylacetoacetate (FAA) hydrolase Pnap_3147 3341221 - 3341859 + | maleylacetoacetate isomerase TERM 3988 3341990 - 3342025 + G 74 -10.2 -3.68506 | CATCACTTCCCCGCC GCGCGGGCTTGCGCTC CCTG GCGCGCTGGTCCGCCC TTTGCCTGGGTCTTC Pnap_3148 3341965 - 3342975 + | hypothetical protein Pnap_3149 3344229 - 3343039 - | hypothetical protein Pnap_3150 3344460 - 3344774 + | hypothetical protein TERM 3989 3344768 - 3344749 - f 90 -12.8 -3.85698 | GGTTTTCCCGAGAAA CCCCAGCC TTCA GGCCGGGG AGGTAGAGGGCGGCA TERM 3990 3345240 - 3345225 - g 75 -3.2 -4.87665 | GCGCAGCCAGAAAAA GCGC CCCTGGTT GCGC TATCGCGGGAAGAAG TERM 3991 3345652 - 3345600 - g 78 -3.4 -5.06414 | opp_overlap 3345638 3345651, overlap 3345606 3345621 GCGGGCGAACAAAAA GAAACGCGTCACGGCGATACAC GCGCAGATG GCCCATCGCCGCAACGACTTTC ACCACCAGCTCAGCA Pnap_3151 3344977 - 3346044 + | IS605 family transposase OrfB TERM 3992 3346181 - 3346197 + T 71 -10.1 -3.53343 | opp_overlap 3346180, overlap 3346193 CGGGGTCAAGCAATT CGCAGGC CAA GCCTGTG TTTCAAACCCGGATT Pnap_3152 3348265 - 3346232 - | type II secretion system protein E TERM 3993 3346892 - 3346868 - G 83 -14.3 -3.53224 | CATGGCGTTGGCAAA GGTCAGCCCGA TCT TCGGGTTGACC TGCACCTGGCGCAGG Pnap_3153 3350472 - 3348418 - | type II secretion system protein E TERM 3994 3349078 - 3349054 - G 83 -14.3 -3.53224 | CATGGCGTTGGCAAA GGTCAGCCCGA TCT TCGGGTTGACC TGCACCTGGCGCAGG TERM 3995 3350313 - 3350328 + g 72 -3.9 -4.58395 | TGAGCAACTGGGTCA GCGTG GTTGGG CGCGC TTTTTCAGGACTCAG TERM 3996 3350722 - 3350712 - g 86 -8.2 -4.58395 | opp_overlap 3350692 3350690 GTGATGGCGCAAAAA CGCG TTC CGCG CATGTTCTACGACTA TERM 3997 3350874 - 3350837 - g 71 -5.5 -4.28254 | gap 1, overlap 3350838 CGTGAACATGGAAAA CCGC-TCGACGGCCACCA AAA TGGTCGGCGTCGATGTGA AGATGCCGGTGGCGA Pnap_3154 3350664 - 3351809 + | L-lactate dehydrogenase (cytochrome) Pnap_3155 3351857 - 3352429 + | hypothetical protein TERM 3998 3352460 - 3352472 + T 73 -10.5 -3.36289 | overlap 3352470 CCCTGCATCGAATGC GCCGG CAA CCGGC TTGATTGGCCTGATG Pnap_3156 3353468 - 3352551 - | cytochrome c, class I TERM 3999 3352722 - 3352704 - G 76 -10.2 -3.88291 | CAGCATGGCGACAAA CTTCCCGG CAT CCGGGTAG CGGGCCAGCGCACTG Pnap_3157 3354472 - 3353651 - | alpha/beta hydrolase fold Pnap_3158 3355420 - 3354608 - | hypothetical protein Pnap_3159 3355544 - 3356839 + | DNA-directed DNA polymerase TERM 4000 3358060 - 3358041 - g 73 -2.8 -4.80882 | gap 1, opp_overlap 3358058 ATTTGACATGAAAAA CGCC-AGCA CCC TGTTTGGCG CCTTCCAGCGCTTTC TERM 4001 3358166 - 3358186 + G 95 -11.1 -4.5442 | TGGTGTCCGCCGAGT CCGCGCC GGGCCAA GGCGCGG TTTTCTACTTCACGC Pnap_3160 3357058 - 3358227 + | PAS/PAC sensor signal transduction histidine kinase TERM 4002 3359131 - 3359088 - g 76 -9.5 -4.08692 | gap 3 CAACCGGCTGGAAAA CGCCGGGCGCGC-GGCCG-GGC TGG GCGACGGCCTGCGCGCG-AGCG ACTGGAAGGACGTGT Pnap_3161 3358351 - 3359277 + | hypothetical protein Pnap_3162 3359312 - 3359755 + | globin Pnap_3163 3359768 - 3360424 + | hypothetical protein TERM 4003 3360461 - 3360480 + T 70 -7 -4.1822 | opp_overlap 3360429 CGGTGCCAGTGCTGC CGAGCCGG ATGG CTGGCCCG TTTATTGCCGTGCCA queF 3361327 - 3360482 - | 7-cyano-7-deazaguanine reductase TERM 4004 3361223 - 3361199 - G 83 -4.9 -5.00616 | overlap 3361201 GTCGGCGCCAAAAAA GATCGGCGTGG CGC CAACACCCATC TCAAGCCGCTTGGCC TERM 4005 3361215 - 3361201 - G 72 -7.8 -4.13561 | overlap 3361199 CGGCGCCAAAAAAGA TCGGCG TGG CGCCAA CACCCATCTCAAGCC Pnap_3165 3362252 - 3361344 - | alpha/beta hydrolase fold TERM 4006 3361707 - 3361678 - G 74 -5 -4.65895 | gap 1 TCGCTCATGGAAAAA CCGGGGCTGCCAA TGGTC TTGA-AGACCCGG ACCGAATGCTCGATG TERM 4007 3362177 - 3362209 + g 75 -14.7 -2.80994 | overlap 3362169 3362182 GCAGCACGACCGGGC GCGGCCGGCCCTGCG CAT CGAAGGCCGGGCCGC TGTCCTCGACTTCGA Pnap_3166 3363105 - 3362329 - | hypothetical protein TERM 4008 3363139 - 3363100 - G 86 -7.2 -4.8048 | gap 1, opp_overlap 3363111 3363113, overlap 3363111 3363113 GGGCGAGAGTAAAAA CAGCATAAAAATAGGGGCC TTT AGCCCCTTATTTT-CGCTG ATTCATTGCAGCGCT TERM 4009 3363129 - 3363111 - R 86 -6.6 -5.02201 | opp_overlap 3363111 3363113, overlap 3363100 3363113 AAAACAGCATAAAAA TAGGGGCC TTT AGCCCCTT ATTTTCGCTGATTCA TERM 4010 3363127 - 3363113 - R 80 -9.2 -4.10552 | opp_overlap 3363111 3363113, overlap 3363111 3363100 AACAGCATAAAAATA GGGGCC TTT AGCCCC TTATTTTCGCTGATT TERM 4011 3363113 - 3363127 + r 81 -8.5 -4.23486 | opp_overlap 3363113 3363111 3363100, overlap 3363111 AACAGCATAAAAATA GGGGC CTTTA GCCCC TTATTTTCGCTGATT Pnap_3167 3364087 - 3363200 - | hypothetical protein TERM 4012 3363727 - 3363691 - G 74 -12.2 -3.53012 | gap 1 TGTTGGCCTCGGAAA GCCGG-CTGGCTGCGGG CGCA CCCGCCACCAGGCCCGC CAGACGGTCGGCGTC TERM 4013 3364356 - 3364338 - R 100 -6.6 -5.77632 | opp_overlap 3364340, overlap 3364340 AAAAGCATAAAAAAA TAGGGGCC TTG AGCCCCTT GTTTTCACCCCTGCC TERM 4014 3364354 - 3364340 - R 85 -9.2 -4.48967 | opp_overlap 3364340, overlap 3364338 AAGCATAAAAAAATA GGGGCC TTG AGCCCC TTGTTTTCACCCCTG TERM 4015 3364340 - 3364354 + r 77 -8.5 -4.17762 | opp_overlap 3364340 3364338 AAGCATAAAAAAATA GGGGC CTTGA GCCCC TTGTTTTCACCCCTG Pnap_3168 3365279 - 3364407 - | hypothetical protein TERM 4016 3364939 - 3364882 - G 71 -13.4 -2.62184 | gap 2 GCCTTGTTGACATCA GCGA-GCCGGGCGGCTG-CGGGCGCG CCGGCCAC CAGGCCCGACAGGCGCCCGGCGTCGG CGACGCACACGTTCA TERM 4017 3365455 - 3365473 + H 100 -10.3 -4.8622 | opp_overlap 3365453 CCATTCAACCCAAGG CGGCATC TGTGC GATGCCG TTTTTCATTGCCCCC TERM 4018 3366614 - 3366598 - g 72 -2.2 -4.74103 | overlap 3366604 GGTCGAAGTGAAAAA GCACAA GCTCA TGGTGC CGCGCTGCACCCGCA TERM 4019 3367770 - 3367760 - g 86 -8.2 -4.60889 | overlap 3367750 3367747 3367761 AACGACGCGCAAAAA CGCG CCA CGCG CCGCACGCTGATCCG Pnap_3169 3365468 - 3368407 + | valyl-tRNA synthetase Pnap_3170 3368689 - 3368456 - | SirA family protein Pnap_3171 3369294 - 3368761 - | NUDIX hydrolase TERM 4020 3368978 - 3369011 + g 71 -5.9 -4.35339 | gap 1 TGAAAGTCATACACG CCAATCAGGTC-CAGC GAT GCCGTGTCCAGATTGG TTTCTTCCTTGATCT cysM 3370290 - 3369388 - | cysteine synthase B TERM 4021 3370391 - 3370381 - R 71 -8.2 -3.79747 | TTACCCACGACCAAA CGCC TTG GGCG CTGCAGTCGGGGCAT Pnap_3173 3371858 - 3370434 - | transposase, IS605 OrfB TERM 4022 3371078 - 3371088 + g 79 -8.2 -4.2679 | AACCTTTTTTCGTGC GCGC CAG GCGC TTTTGCTGACGCTTG TERM 4023 3371180 - 3371160 - G 100 -9 -5.10461 | TTCAGGCAAGAAAAA GTCGCCAC GGCTG GTGGCAAC ACAGTTGTCAGCGAC TERM 4024 3372026 - 3372051 + r 100 -13.4 -5.4833 | opp_overlap 3372026 CACCACATTTAAAAA GCCGTTTCTG TTCAAT CAGAAACGGC TTTTTTGTTGCCTGC TERM 4025 3372051 - 3372026 - R 100 -13.4 -4.7173 | opp_overlap 3372026 CACCACATTTAAAAA GCCGTTTCTG TTCAAT CAGAAACGGC TTTTTTGTTGCCTGC Pnap_3174 3372644 - 3372081 - | NUDIX hydrolase Pnap_3175 3373549 - 3372644 - | UTP-glucose-1-phosphate uridylyltransferase GalU Pnap_3176 3375146 - 3373776 - | sugar transferase TERM 4026 3374989 - 3374976 - G 93 -3.1 -5.65496 | gap 1 CACCAAAAACAAAAA TGC-GG CGG CCAGCA CCAACATTTTGTAAC Pnap_3177 3375493 - 3375128 - | hypothetical protein Pnap_3178 3376765 - 3375518 - | glycosyl transferase TERM 4027 3376967 - 3376946 - R 71 -5.7 -4.27316 | GCTTTGAACGTAAAA CGCGGAGGT TACT ACTACCGCG CCCCACGTCCTCACA Pnap_3179 3378072 - 3376984 - | acyltransferase 3 TERM 4028 3378129 - 3378110 - R 72 -3.6 -4.72007 | TGTTACTAAAACAAA GACCATAA CTGA TTACGATC TACTGCAAAAAACAA TERM 4029 3378203 - 3378181 - R 76 -10 -3.89055 | opp_overlap 3378181 3378180 ACAGATTTCGATAAA TCAACCTTTA CTT TAAAGGTCGA AATTTTTTATCATTT Pnap_3180 3379461 - 3378331 - | hypothetical protein TERM 4030 3378625 - 3378604 - G 84 -4.5 -5.14645 | ATAATGCAACAAAAA TCCACAAAA CATA TTTTTTGGA CTAGACTTATATTTT TERM 4031 3379460 - 3379446 - G 79 -8.6 -4.33151 | GACCACAACCCAAAA TGCCAT CTA ATGGCA AATAATGATCAATTC Pnap_3181 3380281 - 3379469 - | glycosyl transferase family protein TERM 4032 3380078 - 3380068 - G 72 -4 -4.60041 | ATGGATGCTTAAAAA GAAT ATT ATTC AGTCCCCAGTTTTGA Pnap_3182 3380831 - 3380274 - | putative acetyltransferase Pnap_3183 3381985 - 3380828 - | glycosyl transferase, group 1 Pnap_3184 3382671 - 3382000 - | hypothetical protein Pnap_3185 3383468 - 3382668 - | glycosyl transferase family protein TERM 4033 3383286 - 3383296 + g 74 -2.6 -4.93296 | GGCCGGACCTTTATC TTTT TCA AAAA TTTTTATAATACTGG Pnap_3186 3384711 - 3383458 - | hypothetical protein TERM 4034 3384344 - 3384329 - G 81 -2.6 -5.13521 | overlap 3384331 AAATTATCTAAAAAA TATTCC GTTG GAAATA ACAAAAGACTGATTA TERM 4035 3384476 - 3384453 - G 77 -3.8 -4.88067 | opp_overlap 3384457, overlap 3384454 3384457 ACGTACTTATAAAAA CTACGGGAGT AAAA ACCCCCTTAA TAGCATCTGAAAATA Pnap_3187 3385783 - 3384782 - | glycosyl transferase family protein Pnap_3188 3386767 - 3385877 - | exopolysaccharide biosynthesis protein-like protein TERM 4036 3386070 - 3386058 - G 90 -2.7 -5.48787 | ATAACAGACAAAAAA TCACT TGT AATGA CATCTGCTTCTAATC Pnap_3189 3388117 - 3386777 - | polysaccharide biosynthesis protein TERM 4037 3387217 - 3387228 + g 73 -3 -4.69027 | opp_overlap 3387207 3387217, overlap 3387209 TCATACTTTCAAAAA GAAT AAGA ATTC TTTTTGAATAAATTT TERM 4038 3387722 - 3387693 - G 100 -15.3 -5.48213 | GATTGAAAATAAAAA TCTGCTATTTCAA AAGT TTGAAATAGCAGA CCCATAGCTATAATA TERM 4039 3388056 - 3388046 - G 78 -3.2 -5.03747 | AAATTGCTCAAAAAA CATC CAC GACG TATTAATAAAGTATT TERM 4040 3388072 - 3388095 + g 100 -2.5 -6.0458 | opp_overlap 3388063 TATTAATAAAGTATT TAATAAAGC TTTTGT GCGTTATTA TTTTTTTTAATTTAT Pnap_3190 3389575 - 3388472 - | GDP-mannose 4,6-dehydratase TERM 4041 3389666 - 3389653 - R 72 -2.3 -4.94168 | ACAGAATAAAAGAAA GCGCT TATG AGTGC GTCATGAAATCTTGA Pnap_3191 3390631 - 3389657 - | NAD-dependent epimerase/dehydratase Pnap_3192 3392101 - 3390641 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 4042 3392160 - 3392172 + r 77 -4.8 -4.96848 | GACGCACTTGTATGG TGCG AGTAA CGCA TTTTTGTGTGACGGA Pnap_3193 3392969 - 3392217 - | undecaprenyl diphosphate synthase Pnap_3194 3395219 - 3392976 - | exopolysaccharide transport protein family TERM 4043 3394155 - 3394175 + g 80 -4.6 -4.82667 | overlap 3394158 GTGAGCAGCGGTGAA CTGCGCGA TTTGC TCGCGTCG TTTTTGCTGTAGTAA TERM 4044 3394628 - 3394639 + g 72 -7.2 -4.13767 | CGCTGCCAAAGTCTG CCGG CGTA CCGG TTTTGCCCTGCACCA Pnap_3195 3395674 - 3395231 - | protein tyrosine phosphatase Pnap_3196 3396863 - 3395688 - | polysaccharide export protein Pnap_3197 3397122 - 3396883 - | hypothetical protein Pnap_3198 3397728 - 3397174 - | NusG antitermination factor Pnap_3199 3399413 - 3398067 - | hypothetical protein TERM 4045 3398733 - 3398689 - G 80 -15 -3.24925 | gap 1, opp_overlap 3398694 ACCGGATACCAGGAA TGCC-CGGTGGCCCCTGCCTT GTCG ATGGCATCGGCCACCGTGGCA GAGGCGTCCAGCCAC TERM 4046 3399272 - 3399252 - G 74 -2.4 -4.9218 | CACCGACGACAAAAA CTGCGTGG GATTG CCGAGCAG GTCCAGCGCGGCCCG apaH 3399429 - 3400286 + | diadenosine tetraphosphatase TERM 4047 3400302 - 3400323 + T 78 -7.1 -4.64598 | opp_overlap 3400301 3400300 ACCGGGTCAATAAGC GCGCGGACG ATTT CGCCCACGC TTTTTGCCATCATTG Pnap_3201 3401272 - 3400343 - | ribonuclease BN TERM 4048 3401162 - 3401132 - G 72 -7.5 -4.12198 | gap 1, overlap 3401123 3401122 GAGAACGCCGTAAAA CGACATGGCCGCGC TCAT GCGCATCC-CGTCG GCGGCTATCCACTGG Pnap_3202 3402852 - 3401389 - | DEAD/DEAH box helicase domain-containing protein TERM 4049 3401838 - 3401801 - G 71 -5.4 -4.42386 | gap 1, overlap 3401805 CTGGCAGCGACAAAA CTCA-CGGCCAGGCCCG ATGCG CCGGCGCGGCCGGTGCG GCCGATGCGGTGGAC TERM 4050 3402139 - 3402097 - G 71 -4.8 -4.40003 | gap 1, opp_overlap 3402135 GTTGACAAAGACAAA CGC-CTGCTTCAGATCGCG CGCCTT CAGGATCTGGTGCAGCGCG CGGCGCTTGTCGTCG TERM 4051 3402661 - 3402692 + g 76 -5.6 -4.62069 | opp_overlap 3402685 CTCGTGCTTCATCAT CCGCTGCAGCAGCG GGAG CGCAAAGGCAGCGG TTTTTCCGGTGCCGG Pnap_3203 3403988 - 3403056 - | NAD-dependent epimerase/dehydratase TERM 4052 3403962 - 3403948 - G 73 -8.5 -4.07568 | overlap 3403949 CGCTGGCGGCGAAAA CGCGC GGGCA GCGCG CCTAGGGGATTGAGG TERM 4053 3404898 - 3404908 + G 71 -8.2 -3.85698 | opp_overlap 3404887 AAGACCAGTGGAGCG GCCG CAC CGGC TTTGTCCACAAAGCC Pnap_3204 3404051 - 3405091 + | CDP-6-deoxy-delta-3,4-glucoseen reductase Pnap_3205 3405910 - 3405191 - | ABC transporter related Pnap_3206 3406691 - 3405924 - | ABC transporter related Pnap_3207 3407815 - 3406703 - | inner-membrane translocator TERM 4054 3407498 - 3407480 - G 70 -8 -3.96449 | overlap 3407481 CAACACGCCAAACAA GCCGGCCA GCG CGGCCGCC GCCGGAATGGTGGCC Pnap_3208 3408780 - 3407851 - | inner-membrane translocator TERM 4055 3408495 - 3408510 + g 78 -4.6 -4.68593 | TGGGCGAGTTTCGCA GTGGCC GGTA GGCGAC TTTTTCAATCGTGAA TERM 4056 3408903 - 3408866 - R 74 -2 -5.10461 | gap 2, overlap 3408846 3408867 3408868 GCGAGTTAACAAAAA GCCCGCCTGTCTCCAGTC CGAT AACTGGTGA-AGGTG-GC GAGCTAGTGCGCAAA TERM 4057 3408948 - 3408961 + r 77 -8.1 -4.10453 | overlap 3408955 3408956 CTCTAGCGAGAATCG CGCCA CTGC TGGCG TTTTCGCCGGGTTTA TERM 4058 3409029 - 3409040 + r 77 -4.4 -4.95806 | overlap 3409034 3409035 TTATCAGCGGGTTTT CTGA TGCA TCAG TTTTTCTGATGGTTT TERM 4059 3409034 - 3409052 + r 79 -3.1 -5.15969 | overlap 3409029 3409035 AGCGGGTTTTCTGAT GCATCAG TTTTT CTGATGG TTTTTTGCCTTCAAC Pnap_3209 3410335 - 3409037 - | recombination factor protein RarA TERM 4060 3409669 - 3409680 + g 81 -4.4 -5.02074 | overlap 3409663 GCAGCCAGGCATCGG TCAC GCCG GTGA TTTTTTCGGCCCTGG TERM 4061 3409966 - 3409989 + g 74 -5.3 -4.63486 | gap 1, opp_overlap 3409951, overlap 3409966 3409967 3409969 GGCCGCTTTCGACAT G-CGGCAGGA AAGCA TCCTGCTGAC TTTTGTTGAAGCGGT Pnap_3210 3411037 - 3410387 - | outer membrane lipoprotein carrier protein LolA TERM 4062 3410521 - 3410533 + g 80 -4.7 -4.91109 | overlap 3410491 3410518 GGATTTCGAGTGCCG CCAGC CCG GCCGG TTTTTCTCCTGCGCG TERM 4063 3410774 - 3410804 + g 80 -4.7 -4.82901 | gap 2, opp_overlap 3410761 GAGCCACAAGGTCTG GCCG-TCG-GCGACG ATG CTTTGCTCGAACGGC TTTTTATAGAGAAAC Pnap_3211 3413499 - 3411043 - | cell divisionFtsK/SpoIIIE TERM 4064 3411567 - 3411610 + g 70 -7.3 -4.07687 | gap 1, opp_overlap 3411594 TCACATCGACGCTGG GGCGCTGCGTGGCCAGGATC AAATG GATGCCGGCGGCGCGG-GCC TTTTGCGCCAGGCGT TERM 4065 3412201 - 3412234 + g 83 -7.3 -4.57073 | overlap 3412204 3412206 GAGCTTGATCATCTG CCGCTTGGCGTTGGG CAAC TCCAGCGCCATGTAG TTTTTACCCGGAATG TERM 4066 3412933 - 3412915 - G 73 -6.7 -4.35327 | gap 1, overlap 3412917 CCAGGAAAAATTAAA GA-CGCCG GCCA CGGCGATC ACGCCCAAGGCGATG TERM 4067 3412930 - 3412917 - G 71 -9.5 -3.76474 | overlap 3412915 AGGAAAAATTAAAGA CGCCG GCCA CGGCG ATCACGCCCAAGGCG TERM 4068 3413285 - 3413239 - G 80 -5.7 -4.75404 | gap 1, overlap 3413227 3413242 3413243 AAACCCCAGCAAAAA GTAGCTGGCGTCGGCGACCCAG GCGC CCAGGTGGCCGCC-CCAGTTCC GGGCTGCCACCACGG Pnap_3212 3414267 - 3413578 - | CRP/FNR family transcriptional regulator TERM 4069 3415346 - 3415361 + G 73 -6.8 -4.36914 | overlap 3415333 CCGGCTGCATGGCAG CGTTGG ATGC CCAGCG TTTTCTGGAGCAAAG Pnap_3213 3414439 - 3415383 + | thioredoxin reductase TERM 4070 3415659 - 3415649 - g 78 -3.2 -5.011 | opp_overlap 3415654, overlap 3415654 ACGCAAACAACAAAA CCAA GCG TCGG TTCATGCCCAACCTG TERM 4071 3415771 - 3415761 - g 74 -2.4 -4.87665 | TTTGATTGATAAAAA CGGC ATT GACG CAGTCCTGGTGGACC Pnap_3214 3415576 - 3415809 + | ribosomal protein L28 Pnap_3215 3415821 - 3415988 + | ribosomal protein L33 TERM 4072 3416032 - 3416050 + T 100 -13.8 -5.60993 | opp_overlap 3416032 GCGCTGCCAAAAAAA CCCGCTGG TTC CCGGCGGG TTTTTTTATGCCCGG TERM 4073 3416050 - 3416032 - T 100 -11.6 -5.40072 | opp_overlap 3416032 GCGCTGCCAAAAAAA CCCGCTGG TTC CCGGCGGG TTTTTTTATGCCCGG TERM 4074 3416158 - 3416207 + T 77 -11.3 -3.55761 | opp_overlap 3416168, overlap 3416168 TGGCTTCCATTGCAC CAATAAAAAAGCCGCCGCAGCGT TGAG GCGCTGCGGCGGCTTCATAAAGG TTTCAGCGCTGAATC TERM 4075 3416168 - 3416197 + T 100 -22.9 -3.17714 | opp_overlap 3416168, overlap 3416158 TGCACCAATAAAAAA GCCGCCGCAGCGT TGAG GCGCTGCGGCGGC TTCATAAAGGTTTCA TERM 4076 3416197 - 3416168 - T 100 -22.2 -5.5112 | opp_overlap 3416168 3416158 TGCACCAATAAAAAA GCCGCCGCAGCG TTGAGG CGCTGCGGCGGC TTCATAAAGGTTTCA Pnap_3216 3417420 - 3416221 - | fatty acid desaturase TERM 4077 3417038 - 3417059 + g 89 -11.5 -4.25754 | overlap 3417033 3417055 CAGTCATCGGGCGTG CCCCGGCCA AACT TGGCCAGGG TTTCCTTGTTTTTGG TERM 4078 3417055 - 3417067 + g 80 -5.5 -4.8048 | overlap 3417038 3417033 CCGGCCAAACTTGGC CAGGG TTT CCTTG TTTTTGGTCTCGGCG Pnap_3217 3418853 - 3417600 - | Fmu (Sun) domain-containing protein TERM 4079 3418144 - 3418156 + g 74 -4.7 -4.57073 | opp_overlap 3418141 GTGCGCATCGAAGCG CCCAG CGC CAGGG TTTTTCCGCCGGCTC TERM 4080 3418644 - 3418603 - G 74 -5.2 -4.60797 | gap 3, overlap 3418604 3418606 3418607 3418629 GCGCCATACAGAAAA TCACGCGG-GGC-GGCGAATC CGA GAATCGCCAGCCGCCGC-TCA GGCACGCCGCTGCCG TERM 4081 3418871 - 3418883 + H 71 -6.2 -4.27584 | CCCCATTGTCCCACT GCCG CCGCC CGGC TTTTACATTCAGCGT Pnap_3218 3418908 - 3419144 + | hypothetical protein TERM 4082 3419845 - 3419820 - g 88 -16.2 -3.28712 | CGCCGGCCTGGACAA CGCCGAAGCG ACGAAA CGCTTCGGCG CCGAATTCACGCAGG TERM 4083 3420750 - 3420778 + G 74 -5.2 -4.56597 | gap 1, opp_overlap 3420747, overlap 3420754 GCCGAAAATCAAGTT CCACGCGCTGCGT GAGC ACGCCGGGC-TGG TTTTTCAGGCAAAAA prfC 3419182 - 3420798 + | peptide chain release factor 3 Pnap_3220 3421795 - 3420872 - | hypothetical protein TERM 4084 3420929 - 3420915 - G 76 -7 -4.51097 | opp_overlap 3420916, overlap 3420916 TCAAGCAGCAGAAAA TGGGCG CAG CGCCCT TCCTTTCGGTTGCCG TERM 4085 3420916 - 3420928 + g 70 -10.5 -3.57106 | opp_overlap 3420915 3420916 CAAGCAGCAGAAAAT GGGCG CAG CGCCC TTCCTTTCGGTTGCC TERM 4086 3420942 - 3420963 + g 73 -8.7 -4.07687 | overlap 3420943 CCTTCCTTTCGGTTG CCGTCATCG CTGA CGATGACGA TTTTCGGCGCGCCGT TERM 4087 3421810 - 3421822 + r 74 -7.7 -4.18018 | TGGGGATGATTGTGT CTTGC GCA GCAAG TTTTGGATAGCCGAA Pnap_3221 3422312 - 3421845 - | AsnC family transcriptional regulator Pnap_3222 3422938 - 3422342 - | phosphoribosylglycinamide formyltransferase Pnap_3223 3422957 - 3423619 + | hypothetical protein TERM 4088 3423843 - 3423831 - g 83 -4.7 -5.00884 | overlap 3423832 3423833 ATTCTTGGCAAAAAA GGCTG GCT CGGCC ACGGCTGGCCCAAGG TERM 4089 3424206 - 3424229 + G 73 -3.1 -4.77036 | gap 1, opp_overlap 3424206 3424211, overlap 3424211 CGCACCAGCAACGAA GGCAA-GCCG CAGAC CGGCATTTCC TTTTTGCTGATCGAC TERM 4090 3424597 - 3424578 - g 72 -4.2 -4.56597 | CTGTCGGCCGAAAAA TCGGGCAA GAAC TCGCTCGA CATCGCCGGCCTGCT Pnap_3224 3423672 - 3424853 + | acyl-CoA dehydrogenase domain-containing protein TERM 4091 3425227 - 3425215 - g 74 -4.8 -4.56597 | CCTGGCTGCCAAAAA TCGC GTCGG GCGA AAGCCTTATCGTGCT TERM 4092 3425508 - 3425465 - g 78 -14.5 -3.09327 | overlap 3425498 3425499 CTACGGCACGCAAGA CGGCGCGCGCGCTGCCGAA GTCACG CTGGACAACGCGCCCGCCG TGCTGATCACGCTGG Pnap_3225 3424881 - 3425996 + | acyl-CoA dehydrogenase domain-containing protein Pnap_3226 3426945 - 3426001 - | hypothetical protein TERM 4093 3426926 - 3426910 - G 85 -3.5 -5.31275 | overlap 3426912 3426913 GCGCACCACAAAAAA CAGCCGG ATG CCGGAAG GCCGATCACGAACGA TERM 4094 3427020 - 3426999 - R 73 -5 -4.59773 | overlap 3426982 3427000 GGCCAGGCGCAAAAA CCGCCCCG GCTGAT CACGGCGG CGCGTCAACTGAGCA Pnap_3227 3427582 - 3427025 - | HNH endonuclease TERM 4095 3427889 - 3427856 - g 78 -10.2 -4.07568 | opp_overlap 3427870 TGGCGCTGCTGAAAA GCGAAGCCCGGCAC CGGGGC GTTCCGAGCTGCGC CGTGACTTTCGAGCC Pnap_3228 3427741 - 3428766 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 4096 3429032 - 3429014 - g 100 -11.6 -4.88067 | overlap 3429001 3429016 AGGCATTTACAAAAA GCTGCGCG CCG CGCGCTGC GGTGCGGAAAAGTTC TERM 4097 3429135 - 3429162 + G 74 -9.8 -3.75332 | gap 1, opp_overlap 3429125 3429122, overlap 3429136 GACATGATCGTCAAG GCGCG-CCAGCTC AAG GGGCTGGACGCGA TTTACGTTCCCGGCT TERM 4098 3429136 - 3429161 + G 70 -13.3 -2.84878 | gap 1, opp_overlap 3429125 3429122, overlap 3429135 ACATGATCGTCAAGG CGCG-CCAGCTC AAG GGGCTGGACGCG ATTTACGTTCCCGGC Pnap_3229 3428883 - 3431717 + | isoleucyl-tRNA synthetase TERM 4099 3431927 - 3431937 + G 74 -2.4 -4.90266 | GTCCGGGTCCACAAC ACCG GCG CGGC TTTTTCATTCCTGGC TERM 4100 3431965 - 3431977 + G 78 -3.3 -5.0133 | overlap 3431962 GGCGTCGGAATCGGG CTGGC AGC GCTGG TTTTTTACCGGCATC Pnap_3230 3431717 - 3432256 + | lipoprotein signal peptidase TERM 4101 3432435 - 3432449 + G 76 -5.6 -4.56597 | opp_overlap 3432424 CCCACCTGGTTCGCA CCGGCA TCC TGCGGG TTTTTGGCGCCAACC TERM 4102 3432640 - 3432664 + G 72 -4.2 -4.5852 | gap 1, overlap 3432615 3432612 3432611 GCTGGGCGCGGACAT CGGCACCAGCC TGAT GGC-GGTGGTG TTTTCGTTTGACTTG TERM 4103 3433348 - 3433300 - g 100 -10.8 -5.43866 | gap 1, opp_overlap 3433332 3433336, overlap 3433303 CAAGCCCGAAAAAAA CAACGCCAGCGGCCGGCAGCACC ATCT GGACCCGTCGGC-GCTGGCGACG CCTTCGCTGGCCATT TERM 4104 3433345 - 3433303 - g 100 -13.3 -4.79949 | gap 1, opp_overlap 3433332 3433336, overlap 3433300 GCCCGAAAAAAACAA CGCCAGCGGCCGGCAGCACC ATCT GGACCCGTCGGC-GCTGGCG ACGCCTTCGCTGGCC TERM 4105 3433817 - 3433802 - g 77 -2.4 -5.06414 | overlap 3433804 CTGCTCGAAGAAAAA GCCCGC TTTC GCGACC TTGAGCACACCTACG Pnap_3231 3432368 - 3434026 + | Na/Pi-cotransporter II-related protein TERM 4106 3434025 - 3434035 + T 90 -5.4 -5.14965 | TGGCCGAAAAAACCT GAAG ACG CTTC TTTTTTAATAGCACT Pnap_3232 3435109 - 3434114 - | alcohol dehydrogenase TERM 4107 3435160 - 3435150 - H 83 -8.2 -4.45544 | overlap 3435151 GTGGATCAATGAAAA GGCG GGC CGCC ATGGTGCCATGAATC TERM 4108 3435219 - 3435174 - H 81 -12.6 -3.14564 | gap 2, opp_overlap 3435211, overlap 3435151 3435208 3435210 3435211 CCATGGTGCCATGAA TCGGGGCAGGCCGCTG--CCGG CCAG CCGGTGCAAAGACCCGCCCCGA TGGGAAGCCGGGGCG TERM 4109 3435235 - 3435211 - H 72 -12.1 -2.60615 | opp_overlap 3435211 3435226, overlap 3435174 3435210 3435208 AGCCGGTGCAAAGAC CCGCCCCGA TGGGAAG CCGGGGCGG CTTGTTACAGTGACG TERM 4110 3435615 - 3435649 + G 74 -14.9 -2.52676 | overlap 3435620 TGTTCTTCGGCAGGC CGGTGTCGCGCCGGC AGGTG GCCGGCGCGCTGCTG TCGATTGCCGGCGTG TERM 4111 3435620 - 3435644 + G 74 -14.2 -2.66733 | overlap 3435615 TTCGGCAGGCCGGTG TCGCGCCGGC AGGTG GCCGGCGCGC TGCTGTCGATTGCCG TERM 4112 3435806 - 3435823 + G 75 -4 -4.72272 | opp_overlap 3435793, overlap 3435807 GAGCCGCCGGAACTT CGCCGC GACTGG GCGGCA TTTTTGATGGCGCAG TERM 4113 3436005 - 3436021 + G 83 -6.5 -4.83615 | GCGTGCAGCGCGTCG GCCCG GCGATTG CGGGC TTTTTCTCGAACCTG Pnap_3233 3435254 - 3436153 + | hypothetical protein Pnap_3234 3436555 - 3436166 - | hypothetical protein Pnap_3235 3437349 - 3436555 - | short-chain dehydrogenase/reductase SDR Pnap_3236 3438361 - 3437384 - | hypothetical protein TERM 4114 3437985 - 3437962 - G 71 -5.2 -4.42386 | opp_overlap 3437968 GGTTGAGGTACAAAA TCAGCCGCTC CAGC GAGGCGCTGA TGTGCGCCAGGCCGG TERM 4115 3438507 - 3438524 + r 100 -12.7 -4.56597 | opp_overlap 3438507 TCGCCCATAAAAAAA CGGCACC CGAA GGTGCCG TTTTTGGCAAGGCCG TERM 4116 3438524 - 3438507 - R 100 -12.7 -5.60993 | opp_overlap 3438507 TCGCCCATAAAAAAA CGGCACC CGAA GGTGCCG TTTTTGGCAAGGCCG Pnap_3237 3440066 - 3438555 - | hypothetical protein TERM 4117 3438675 - 3438711 + g 81 -6.4 -4.69656 | gap 2, opp_overlap 3438671 3438669, overlap 3438696 GGTCACGAACACGCT CCAGTCGCCGCGCGACAG CAG CAG-CGCCCGGCG-CAGG TTTTCTTCCATCATT TERM 4118 3439286 - 3439251 - G 70 -11.8 -3.16323 | gap 1 AAAAGCCGCCAGCAA GGCACCGCCGCCAGGCA GGA TGCCCAGCG-CAGAGCC CAGGAAAGTGCCGCG Pnap_3238 3440567 - 3440079 - | hypothetical protein Pnap_3239 3442527 - 3440725 - | type II secretion system protein E Pnap_3240 3443336 - 3442569 - | hypothetical protein TERM 4119 3442870 - 3442858 - G 75 -3.3 -4.83615 | overlap 3442859 CAGTTGGCATAAAAA TCGGC GTC GTCGA GCACCGGCGCGGCCG TERM 4120 3442927 - 3442939 + g 100 -6.9 -5.73563 | AGCAGATCGACCGTG CCGTG GTG CGCGG TTTTTTTGATTTCAT Pnap_3241 3444473 - 3443394 - | hypothetical protein TERM 4121 3443618 - 3443661 + g 74 -5 -4.56597 | opp_overlap 3443636 3443637 TGCTGCTGACATGGC GGTTGGCCAGGTGAAACAGC GCGC GCGGCGTCAGCCGGCCGGCC TTTTTGCGCGAGACA TERM 4122 3444429 - 3444419 - G 73 -8.2 -4.08767 | CCCAGGCCTTGAAAA CGCC CTC GGCG GTGGAAGGAAGCGGC Pnap_3242 3444957 - 3444460 - | hypothetical protein TERM 4123 3444763 - 3444773 + g 71 -5.4 -4.45083 | TCTGGCCAACAGCCA TTCG CTA CGAA TTTTATAGCTATCAG Pnap_3243 3445799 - 3444951 - | TatD-related deoxyribonuclease TERM 4124 3447029 - 3447010 - g 79 -9.2 -4.18018 | opp_overlap 3447011 3447026 CGTGCCGATTGAAAA CGCCGCCT CGGC AGCCGGCG TGCCTCCTTTCTGAA Pnap_3244 3446078 - 3447043 + | peptidase S1 and S6, chymotrypsin/Hap TERM 4125 3447034 - 3447048 + F 79 -2.8 -5.18357 | overlap 3447026 3447035 3447041 GGCAGCCGGCGTGCC TCCTTT CTG AAAGGC TTTTTTCATGGATTC Pnap_3245 3447056 - 3448075 + | ATPase TERM 4126 3448131 - 3448166 + F 79 -13.2 -2.70932 | gap 1, opp_overlap 3448151 3448154 CCCGAGGGGGCCGCC CCGCCTGCGG-CCTGGC AAA GCCAGTTCCGCGGCCGG TACTTGGACGACCGG TERM 4127 3448840 - 3448815 - g 100 -16.1 -4.07687 | overlap 3448801 AGCCGGCTGGGAAAA GCCGCTGGGAC TGCT GGCCCAGCGGC ACGAGGTCGTCGCCG Pnap_3246 3448192 - 3449178 + | hypothetical protein TERM 4128 3450138 - 3450126 - g 78 -6.3 -4.63184 | opp_overlap 3450125 AACCGATCTGAAAAA GGTTT ACC AAACC CTGAGTTCGCGGCTG TERM 4129 3450184 - 3450173 - g 74 -5.8 -4.5187 | TGGAAAAAAAGGAAA CCGA GATC TCGG GGCTGCTGGCACTGG Pnap_3247 3449200 - 3450264 + | von Willebrand factor, type A TERM 4130 3450317 - 3450332 + T 78 -6.1 -4.82901 | overlap 3450328 3450329 ACGGCAGCCGGATTC CAGCG CTGACA CGCTG TTTTTATGGCAAAAA Pnap_3248 3450598 - 3450401 - | hypothetical protein TERM 4131 3450515 - 3450554 + g 73 -10.7 -3.61715 | overlap 3450517 GGCCGCTTCCCGCTT GA-CGGCGGCCGTGGCCTG CGCG CGGGCCGCG-CCGGCGATC TTGTTGGCACCGCTC TERM 4132 3450517 - 3450551 + g 71 -13.5 -2.63073 | gap 1, overlap 3450515 CCGCTTCCCGCTTGA CGGCGGCCGTGGCCTG CGCG CGGGCCGCG-CCGGCG ATCTTGTTGGCACCG Pnap_3249 3451803 - 3450652 - | patatin TERM 4133 3450724 - 3450745 + g 79 -11.5 -3.87869 | CGCCTCCAGCCAGCC CCTGGCCCG CTCG CGGCCCAGG TTTCTCAGCAGTTCA Pnap_3250 3453219 - 3451885 - | hypothetical protein TERM 4134 3452058 - 3452085 + g 88 -8.4 -4.74706 | gap 1 ACTGGCGGGCCAGTT CCGGGC-TGAAGG CGG CCTTGGCGCCCGG TTTTTGGATCTTGCG TERM 4135 3452433 - 3452480 + g 91 -9 -4.58395 | gap 1, overlap 3452436 CATCGGGCAGGTTCG CAGGCAGCGCGAGCGATAGCGTC AGC GAC-CGGGCGCTGGCGCTGCTGG TTTTTCCGGCCTGCA TERM 4136 3452490 - 3452507 + g 76 -9.1 -4.09864 | TGCTGGTTTTTCCGG CCTGCAC GGCG GTGCGGG TTTTGGCCGCTCGGT Pnap_3251 3454007 - 3453255 - | hypothetical protein TERM 4137 3453724 - 3453710 - G 72 -4.3 -4.56597 | opp_overlap 3453723 CGTCTTCGCGAAAAA TGATG GCGTT CATCA TGCCGCGCAGGTGGG Pnap_3252 3454655 - 3454056 - | hypothetical protein Pnap_3253 3454970 - 3454695 - | heat shock protein DnaJ domain-containing protein TERM 4138 3454845 - 3454866 + g 100 -9.4 -4.84359 | gap 1, overlap 3454837 GACCGCCCGGAAGCG CGCTGGCGC AGCGG GCGCC-GCG TTTTTGTCGGGATGC Pnap_3254 3455260 - 3455757 + | mucin-associated surface protein (MASP) TERM 4139 3455782 - 3455799 + T 100 -11.3 -5.60993 | opp_overlap 3455782 GCGCTTCCCTGAAAA GACAGGC CTTG GCCTGTC TTTTTTTATGGCCGG TERM 4140 3455799 - 3455782 - T 88 -11.3 -4.07568 | opp_overlap 3455782 GCGCTTCCCTGAAAA GACAGGC CTTG GCCTGTC TTTTTTTATGGCCGG Pnap_3255 3456807 - 3455851 - | lipoprotein releasing system, ATP-binding protein TERM 4141 3456663 - 3456622 - G 71 -12.9 -3.05384 | gap 1, opp_overlap 3456628 CGCGTGTCCATCCAA GTTGGGGCCGCGGATCCGGC TTT GCCGG-TCCGCAGGCGCAGC GGCCCCCTCGGGGGG Pnap_3256 3458056 - 3456800 - | LolC/E family lipoprotein releasing system, transmembrane protein Pnap_3257 3458115 - 3459065 + | hypothetical protein TERM 4142 3459632 - 3459620 - g 91 -4.8 -5.26875 | TGTTCAACGAAAAAA TCGG CCTGC CCGA CGCCGACGTGATCGT Pnap_3258 3459112 - 3460854 + | single-stranded-DNA-specific exonuclease RecJ TERM 4143 3460951 - 3460932 - T 70 -10 -3.35996 | gap 1 GATCGGTATTCAGAA GGCG-TCCG CAT CGGAACGCC CGTCATTCCACAGAG Pnap_3259 3462267 - 3461143 - | TRAP-type uncharacterized transport system protein, periplasmic component Pnap_3260 3462698 - 3462300 - | hypothetical protein TERM 4144 3462424 - 3462447 + g 100 -13.1 -4.57073 | TCTACCGCCACGGGC GGCGCCGGC TCGGGC GCTGGCGCC TTTTTGCCCGACATC TERM 4145 3462762 - 3462737 - R 71 -4.6 -4.65895 | opp_overlap 3462742, overlap 3462742 GGGGGCATGCAAAAA GCCAAGGCGA GTCAAG CCGCCTCGCC TTTCAAAATCGCCAC TERM 4146 3462794 - 3462771 - R 70 -6.6 -4.07568 | gap 1, overlap 3462772 CCTCGCCTTTCAAAA TCGCCACGGCG CGC CGCC-CGGCGT CCAGAAAGCGGCGGT Pnap_3261 3465753 - 3462748 - | hypothetical protein TERM 4147 3462969 - 3463018 + g 72 -12.1 -3.29144 | gap 1 GCAGGTTCGCCAGGT CGATGCTGTCGGCGCTGGCCATGA AGC TCTTGCCCAGCGCC-ACCGGGTCG TTGTCAAAACCGTCG TERM 4148 3463224 - 3463251 + g 78 -3.2 -5.06414 | overlap 3463224 3463226 CGAGCCGGGCGCGCG CGCCGCCGGTGT CGAT GCGGCGGCGGTA TTTTTCTTCCAGGAA TERM 4149 3463226 - 3463249 + g 72 -8 -4.16307 | overlap 3463224 3463224 AGCCGGGCGCGCGCG CCGCCGGTGT CGAT GCGGCGGCGG TATTTTTCTTCCAGG TERM 4150 3464836 - 3464863 + g 81 -9.9 -4.1585 | overlap 3464859 GGGCATGCGGCCCTG CGGCG-CGGTCTC GGGC GAG-CCGTCGCCG TTTTCCGCGTTCTCC TERM 4151 3465413 - 3465388 - G 91 -5.3 -5.30616 | gap 1, opp_overlap 3465388 3465410, overlap 3465389 3465390 GCAGGCAAACAAAAA GCGGCCCAGCCG GCG CTTCTGG-CCGC CGAGCGTGGCGCCGA TERM 4152 3465942 - 3465918 - R 91 -10 -4.56775 | gap 1 ATTTTTTCGGAAAAA CCGGCCTGTGC GCCT GC-CAGGCCAG AAATTCCGAACGCTT Pnap_3262 3467301 - 3465901 - | filamentation induced by cAMP protein Fic TERM 4153 3466540 - 3466582 + g 76 -9.1 -4.07568 | gap 1, opp_overlap 3466531, overlap 3466551 GGAAATCTCCACCGG CCTGCGGCGC-AGGCGGC CACAGGCA GCCTCTTCGCGCAGCAGG TTTTGCGACAGGACG TERM 4154 3467400 - 3467355 - R 100 -27.1 -3.40403 | opp_overlap 3467327 3467326 3467365 CGCGCCTTACTACAA GCGCGACACATTGCGCGACAC TATT ATGTCGTGCAATGTGTCGCGC TACCTAACTGAGCCC Pnap_3263 3469133 - 3467481 - | exonuclease, RNase T and DNA polymerase III Pnap_3264 3470494 - 3469136 - | hypothetical protein TERM 4155 3469433 - 3469445 + g 72 -7.7 -4.19735 | AAGTTGATTTTTTTG GCATC GAA GATGC TTTAATTTTGAAACA Pnap_3265 3470772 - 3470542 - | hypothetical protein Pnap_3266 3470808 - 3471476 + | CRP/FNR family transcriptional regulator Pnap_3267 3471579 - 3471770 + | hypothetical protein Pnap_3268 3471912 - 3473015 + | ABC transporter related Pnap_3269 3473086 - 3474375 + | twin-arginine translocation pathway signal Pnap_3270 3474402 - 3475316 + | binding-protein-dependent transport systems inner membrane component Pnap_3271 3475319 - 3476203 + | binding-protein-dependent transport systems inner membrane component Pnap_3272 3476200 - 3476910 + | GntR family transcriptional regulator TERM 4156 3477592 - 3477610 + G 72 -7.3 -4.14243 | overlap 3477575 GCCACGCGCCGCCGC CCCGGCG CCGCA CGCCCGG TTTTGACGTGCCCTG Pnap_3273 3476919 - 3477674 + | Asp/Glu racemase Pnap_3274 3477743 - 3478606 + | phosphotransferase domain-containing protein TERM 4157 3478954 - 3478913 - g 79 -16 -2.52464 | CTGTCGGCGAATTCA CCGCCATCGTCATGATCA CGCCAC TGGTCATGACGATGGCCG CCTCGCTCACGCTGG Pnap_3275 3478603 - 3479508 + | hypothetical protein Pnap_3276 3479519 - 3480154 + | Sua5/YciO/YrdC/YwlC family protein Pnap_3277 3480188 - 3480856 + | peptidase M50 TERM 4158 3481967 - 3481940 - g 70 -7.6 -4.07885 | gap 1, overlap 3481944 3481945 3481956 CAGCCGCCGCCAAAA GCAAG-GCCGCCA AAA CGGCGGCACCAGC CTTCAAGCAATACCG TERM 4159 3482128 - 3482101 - g 91 -9.1 -4.56597 | gap 1, overlap 3482104 GGCCGGTTGCAAAAA GAAGGCTCGGCC GCGCT GGCCG-GCCTGC ATGACAAGCTGCAGG TERM 4160 3482125 - 3482104 - g 91 -9.4 -4.40561 | gap 1, overlap 3482101 CGGTTGCAAAAAGAA GGCTCGGCC GCGCT GGCCG-GCC TGCATGACAAGCTGC Pnap_3278 3480892 - 3482211 + | tryptophanyl-tRNA synthetase TERM 4161 3482241 - 3482265 + T 74 -11.4 -3.1637 | opp_overlap 3482242 ACGGGCACAAAAAAA AGCGGCTGGT ACTGG ACCAGCCGCC TTGATGCAAGTGTCT TERM 4162 3482264 - 3482242 - T 100 -14.9 -5.93809 | opp_overlap 3482241 CGGGCACAAAAAAAA GCGGCTGGT ACTGG ACCAGCCGC CTTGATGCAAGTGTC Pnap_3279 3482476 - 3482291 - | CsbD family protein Pnap_3280 3483314 - 3482574 - | two component transcriptional regulator TERM 4163 3482884 - 3482857 - G 73 -6.3 -4.2679 | CAATCGGCACGAAAA CGCCAGCC-GCCG AACT CGGCAAGCTG-CG AGCGCATTTCCGGCT Pnap_3281 3485353 - 3483311 - | PAS/PAC sensor hybrid histidine kinase TERM 4164 3483546 - 3483520 - G 83 -13 -3.90318 | TCACCACGTCAGAAA CCAGGATGCCCA CGG TGGGCACGCTGG TCAGCAGCAGCAAGG TERM 4165 3483907 - 3483882 - G 81 -4.5 -5.00616 | overlap 3483884 TTGGTGGTGAAAAAA GGCTCGGAGGC GCGC GCCTGCGTGGC GGCGTCCATGCCGGT TERM 4166 3484225 - 3484256 + g 76 -13.7 -3.14132 | overlap 3484216 CGGAGCGCAGCGACA GCGGCTGCTTGCG GGCAAA TGCCAGCAGCCGC TTGATCAGGGACGCA TERM 4167 3485023 - 3484992 - G 76 -6.4 -4.39426 | overlap 3484993 TACAGCGTGACAAAA CCGTTGTGCGGCAA GGGC TCGCCGCGCACCGC CAGAATCTGCCCGTC TERM 4168 3485234 - 3485219 - G 76 -6.1 -4.60487 | CAGCAGGCGCAAAAA GGCCT TGTTCC AGGCC ACGAAGTTCAGATTG TERM 4169 3485639 - 3485669 + G 100 -16.9 -3.64703 | opp_overlap 3485619 CCGGGTCTATCCCGA GCGCGTGTCGCTG ATTCA TGGCGACACGCGC TTTACCTGGGCGCAG Pnap_3282 3485535 - 3487175 + | AMP-dependent synthetase and ligase TERM 4170 3487471 - 3487459 - g 76 -9.1 -4.07568 | opp_overlap 3487437 CGTCGTGCTCGAAAA GGGCT CCG AGCCC GGCGCGCACATCCTG Pnap_3283 3487298 - 3488983 + | electron-transferring-flavoprotein dehydrogenase Pnap_3284 3489028 - 3489504 + | dehydratase TERM 4171 3489765 - 3489744 - g 84 -15.9 -3.36991 | overlap 3489742 CAGCAGCTGGAAAGA CGGCGTGGT CACC ACCACGCCG GGCTTCAAGGAAGCC TERM 4172 3489801 - 3489778 - g 72 -11.8 -3.33696 | gap 1, opp_overlap 3489766 CCGGGCTTCAAGGAA GCCTTCAGGCA GTT TGCC-GAAGGC GGCTGGCAAGGCGTG Pnap_3285 3489541 - 3491322 + | acyl-CoA dehydrogenase domain-containing protein TERM 4173 3491483 - 3491497 + G 100 -4.2 -5.42862 | overlap 3491468 CCTGGACCTTGACCG GCATCG TCC TGGTGC TTTTTTTCGGCCTGT Pnap_3286 3491392 - 3491709 + | hypothetical protein TERM 4174 3491923 - 3491896 - g 73 -6.9 -4.26076 | opp_overlap 3491922 CCAGCCGCACCAAAA CCGCCTCCGAC TTTTAC ACCGCAGGCGG CGGCATCACCGGCTT TERM 4175 3492372 - 3492397 + G 95 -11.1 -4.62471 | overlap 3492374 3492376 TGCCTGCTGCTGTTC GGCGGCACGGT CATC ACCGTGCTGGC TTTTTCGCAGTTCGG Pnap_3287 3491706 - 3493382 + | acetate permease TERM 4176 3493431 - 3493400 - T 95 -15.4 -3.48276 | gap 1, opp_overlap 3493407, overlap 3493407 GCTTGCTCTAGACAA TG-AAAAAGCCCCGA GTT TCGGGGCTTTTTTCA TGGTGGCCATTCGGT TERM 4177 3493407 - 3493423 + T 100 -13.7 -5.1861 | opp_overlap 3493407 3493400 CTAGACAATGAAAAA GCCCCGA GTT TCGGGGC TTTTTTCATGGTGGC TERM 4178 3493423 - 3493407 - T 100 -13.7 -4.96646 | opp_overlap 3493407, overlap 3493400 CTAGACAATGAAAAA GCCCCGA GTT TCGGGGC TTTTTTCATGGTGGC TERM 4179 3494108 - 3494065 - T 100 -9 -4.98531 | opp_overlap 3494065 3494060 GGCTGAAAGCAAAAA GCCTGACAATCGCAATTC GTTGATTT GAATTGCTTTTATCAGGC TTTTACTATTTGGCG TERM 4180 3494065 - 3494108 + T 79 -7.5 -4.49756 | opp_overlap 3494065, overlap 3494060 GGCTGAAAGCAAAAA GCCTGACAATCGCAATTCG TTGATT TGAATTGCTTTTATCAGGC TTTTACTATTTGGCG TERM 4181 3494876 - 3494862 - T 100 -10 -5.51165 | opp_overlap 3494862 AAAAGGCCAAAAAAA GCACCA AGA TGGTGC TTTGATTGAAATCAT TERM 4182 3494862 - 3494876 + T 80 -10 -3.92178 | opp_overlap 3494862 AAAAGGCCAAAAAAA GCACCA AGA TGGTGC TTTGATTGAAATCAT TERM 4183 3494936 - 3494900 - T 71 -7.8 -3.98716 | AAATCATGAAGGAAA CCGGGTCAGGCGGTCG CTGGC CTACCGCCTGGGCAGG TCGTGCCAAGCATCA Pnap_3288 3495995 - 3494949 - | PBSX family phage portal protein Pnap_3289 3497785 - 3495995 - | hypothetical protein TERM 4184 3498653 - 3498614 - g 72 -7.3 -4.13767 | gap 2 GCGCCCATGCCAAAA GCCTGGCTGCGCTGGAAAA GAAC TTTGCCA-CGCAGC-AGAC CGAGCACAAGACCCT Pnap_3290 3497851 - 3498771 + | phage capsid scaffolding Pnap_3291 3498821 - 3499828 + | P2 family phage major capsid protein TERM 4185 3500535 - 3500520 - g 74 -4.6 -4.56597 | GCGCCGGCTGAAAAA GCCGGA CGAG CCCAGC GTGCCGATACCCCTT Pnap_3292 3499834 - 3500616 + | phage small terminase subunit TERM 4186 3500686 - 3500706 + G 74 -5.4 -4.57073 | opp_overlap 3500686 ACGCCCACGGAAGAA GCCATCAT CACCA ATGACGGC TTTTTCCCCGACATC Pnap_3293 3500647 - 3501111 + | phage head completion Pnap_3294 3501111 - 3501317 + | phage tail X family protein Pnap_3295 3501321 - 3501539 + | hypothetical protein TERM 4187 3501563 - 3501585 + G 77 -15.6 -2.56715 | overlap 3501560 ATGCGCATATTTGTA GCCGCGTTGA CAC TCAGCGCGGC TGGCTTCATCGGCAT Pnap_3296 3501536 - 3502048 + | prophage LambdaSo, lysozyme, putative Pnap_3297 3502045 - 3502551 + | phage protein, putative TERM 4188 3502812 - 3502782 - g 72 -14 -2.82015 | opp_overlap 3502756, overlap 3502798 3502799 TGGAGACCCACCAGA TCGAGCTGTTCGAC AAC GTCGAGCAGCGCGA CAAGGCCATCCGCTT Pnap_3298 3502553 - 3502981 + | P2 phage tail completion R family protein Pnap_3299 3502985 - 3503452 + | phage virion morphogenesis protein Pnap_3300 3503525 - 3504178 + | phage baseplate assembly protein V Pnap_3301 3504175 - 3504546 + | GPW/gp25 family protein Pnap_3302 3504543 - 3505430 + | baseplate J family protein Pnap_3303 3505423 - 3506100 + | phage tail protein I Pnap_3304 3506107 - 3507903 + | hypothetical protein Pnap_3305 3507908 - 3508645 + | hypothetical protein TERM 4189 3508746 - 3508791 + F 70 -7 -4.09739 | gap 2 TCGCGCGCGCATGAG GTCGGCATGATGAGCATCAGTC AATC GAC-GCTGTTCA-CATGCCCAC TTTTAAAACCATTCA Pnap_3306 3508784 - 3510235 + | phage tail collar domain-containing protein Pnap_3307 3510241 - 3510531 + | hypothetical protein TERM 4190 3510670 - 3510623 - g 76 -13.5 -3.17051 | opp_overlap 3510623, overlap 3510621 TCCGGACCATCAACA CGTCGATCATCGGCCTCG-TGGC CACG GCCAGCGATGCCGATG-CCGCCG TCTTCCCGCTCAACA Pnap_3308 3510544 - 3511719 + | phage tail sheath protein Pnap_3309 3511745 - 3512257 + | phage major tail tube protein Pnap_3310 3512319 - 3512561 + | hypothetical protein Pnap_3311 3512593 - 3512949 + | phage tail E family protein TERM 4191 3512955 - 3512978 + F 74 -9.6 -3.64703 | gap 1, opp_overlap 3512954, overlap 3512956 GACCGCGTAGAGGAC G-CCATGGCCG ACC TGGCCATGGTC TTTCACTGGGCGCCG TERM 4192 3512956 - 3512976 + F 88 -13.3 -3.40597 | opp_overlap 3512954, overlap 3512955 ACCGCGTAGAGGACG CCATGGCCG ACC TGGCCATGG TCTTTCACTGGGCGC Pnap_3312 3512958 - 3513074 + | phage P2 GpE family protein TERM 4193 3513610 - 3513585 - g 73 -3.1 -4.67641 | AGCGCAAAAGCAAAA GCTCAAGGCCG TGGC CGACCACCAGC GAAAGCTCAGCGCCC TERM 4194 3513701 - 3513659 - g 74 -10.5 -3.71527 | overlap 3513631 GGGCAATGATGCAAA CCGGCATCC-TGGCCGCCGGC GGC GTGGGCG-CCATGGCTGCCGG GCGCGGCATGGCCCG TERM 4195 3514302 - 3514287 - g 77 -2.5 -4.98255 | overlap 3514289 GCTCAACGAGAAAAA GCTGG GCAAGG CCAAC AAGCTGCTCGGCAGC TERM 4196 3514317 - 3514305 - g 71 -9.1 -3.68222 | GGGCAAGGCCAACAA GCTGC TCG GCAGC GAAGGCTTCCAGCTC Pnap_3313 3513109 - 3515700 + | TP901 family phage tail tape measure protein Pnap_3314 3515721 - 3516170 + | phage P2 GpU family protein Pnap_3315 3516176 - 3517210 + | phage late control D family protein TERM 4197 3517237 - 3517223 - T 100 -7.1 -5.4833 | opp_overlap 3517222 3517223 TGAGCCAAGAAAAAA CCACC GCGAA GGTGG CTTGCTTATCAGCTA Pnap_3316 3517707 - 3517327 - | XRE family transcriptional regulator Pnap_3317 3517738 - 3517989 + | hypothetical protein Pnap_3319 3518384 - 3518809 + | phage transcriptional activator, Ogr/delta TERM 4198 3520269 - 3520227 - g 78 -5.4 -4.75174 | opp_overlap 3520241, overlap 3520231 CAGCGAATTCAAAAA GCAACTCCTGCACATGGCCC CCG GCGCCATGTTCAGCGGCTCC AGCTACCAGCTCGAA Pnap_3320 3518806 - 3521694 + | phage-like protein TERM 4199 3521763 - 3521792 + G 84 -8.5 -4.45765 | CAAAGCCTTGCCACC CCCGACAGCGTGC TTCC GCAGCCTGTTGGG TTTATTAATTTTCAA Pnap_3321 3521742 - 3522446 + | hypothetical protein TERM 4200 3522486 - 3522519 + G 70 -7.4 -4.07568 | gap 1, overlap 3522491 AACGAAATTTCCCCT GCCCCCCAGCTCAAC GGCCA GTTGAGC-GTGGTGC TTTTCAACGAAGACC Pnap_3322 3522468 - 3523019 + | hypothetical protein TERM 4201 3523099 - 3523057 - T 75 -4 -4.91109 | opp_overlap 3523062 3523085, overlap 3523060 3523062 TGCCCACTACAAAAA CAATAGCTACCCGCGCATGC ACA GCGTGCGCAAAAAGCTTTTT TTGCATAAATTTATG TERM 4202 3523096 - 3523060 - T 75 -5.7 -4.56153 | opp_overlap 3523062 3523085, overlap 3523057 3523062 CCACTACAAAAACAA TAGCTACCCGCGCATGC ACA GCGTGCGCAAAAAGCTT TTTTTGCATAAATTT TERM 4203 3523094 - 3523062 - T 71 -8.3 -3.8772 | opp_overlap 3523062 3523085, overlap 3523060 3523057 ACTACAAAAACAATA GCTACCCGCGCATGC ACA GCGTGCGCAAAAAGC TTTTTTTGCATAAAT TERM 4204 3523062 - 3523094 + T 91 -3.9 -5.47821 | opp_overlap 3523062 3523060 3523057, overlap 3523085 ACTACAAAAACAATA GCTACCCGCGCATGC ACA GCGTGCGCAAAAAGC TTTTTTTGCATAAAT Pnap_3323 3523514 - 3523122 - | hypothetical protein TERM 4205 3523266 - 3523228 - G 91 -6.6 -5.26119 | CGGTCAAAAATAAAA GTCCGCGTCGCATTGCGA AGA TGGCAATGGGCCGAGAAC TTGCGCGGTGTCGAG Pnap_3324 3523949 - 3523536 - | hypothetical protein TERM 4206 3524246 - 3524275 + H 100 -12.1 -5.08824 | TCCTACTCGCTTGGG CTGCCGCCCGGTT GGGA AGCCGAGTGGCAG TTTTTTAACTGCACC Pnap_3325 3524305 - 3524925 + | hypothetical protein Pnap_3326 3524922 - 3525419 + | hypothetical protein TERM 4207 3526050 - 3525995 - g 100 -13.8 -5.05606 | gap 1 CGCAAGAAAAAGAAA GCCGGCG-CGCTGGACAGCACGGCGCT TGA AACGCTGTGCAGCCAGGCGGCGCTGGC CGGCATGACGCTGGA Pnap_3327 3525416 - 3526450 + | hypothetical protein TERM 4208 3527256 - 3527220 - g 100 -18.7 -3.90922 | ACCGGCTGCAAAGAA GAGCACGGCCCTGCCCC GCT GGAGCAGCGCCATGCCC CAGCCCAGCCCGGCC Pnap_3328 3526465 - 3527712 + | hypothetical protein Pnap_3329 3527712 - 3527978 + | hypothetical protein Pnap_3330 3528270 - 3528686 + | hypothetical protein TERM 4209 3528763 - 3528750 - g 77 -2.3 -5.05782 | overlap 3528751 AGGGATGCGAAAAAA TCAGC CCTG GCTGC GACAACTGCTACGCC Pnap_3331 3528683 - 3529627 + | phage Gp37Gp68 family protein Pnap_3332 3529624 - 3529881 + | hypothetical protein TERM 4210 3530436 - 3530402 - g 77 -2.1 -5.05782 | ATCTACCGCAAAAAA GTGGTCCTGGAGA AGTTCGGGA TCTCGGAGACCAC GCTCAGGCGTTGGAT Pnap_3333 3530357 - 3530581 + | phage transcriptional regulator, AlpA Pnap_3334 3531785 - 3530589 - | phage integrase family protein TERM 4211 3531901 - 3531886 - R 100 -10.4 -4.8622 | opp_overlap 3531886 CTTCCCAATGAAAAA CGCACC CGAA GGTGCG TTTTGGTGCGTCTTA TERM 4212 3531886 - 3531901 + r 90 -10.4 -4.30809 | opp_overlap 3531886 CTTCCCAATGAAAAA CGCACC CGAA GGTGCG TTTTGGTGCGTCTTA Pnap_3335 3533389 - 3532055 - | seryl-tRNA synthetase Pnap_3336 3534383 - 3533439 - | threonine dehydratase Pnap_3337 3535385 - 3534390 - | hydroxymethylbutenyl pyrophosphate reductase TERM 4213 3534863 - 3534877 + g 73 -11.4 -3.64703 | overlap 3534842 TCTCGGCCGCGTCGT CCACGC TCA GCGTGG TTTGCGTGACGACGG Pnap_3338 3535885 - 3535388 - | peptidylprolyl isomerase, FKBP-type TERM 4214 3536032 - 3536044 + H 100 -7.7 -5.14819 | GACCGCGCTGACCTG CTGCA TAC TGCAG TTTCTTTTTTACTTT TERM 4215 3536405 - 3536388 - g 71 -4.7 -4.42238 | GGAGCTGAAGGAAAA GGCGCTG TTCA CCACGCC GCAAGCGGTGCGCGA Pnap_3339 3536089 - 3536763 + | DNA repair protein RadC Pnap_3340 3536800 - 3537483 + | Smr protein/MutS2 Pnap_3341 3538394 - 3537567 - | response regulator receiver protein Pnap_3342 3538518 - 3538748 + | hypothetical protein Pnap_3343 3539535 - 3538798 - | 1-acyl-sn-glycerol-3-phosphate acyltransferases TERM 4216 3539566 - 3539540 - R 74 -10.1 -3.72695 | gap 1 AGCCGCCTCATGAAA GCGC-CTGCCGG CGTG CCGCCAGAGCGC AGGAATCGCAATAGC Pnap_3344 3540890 - 3539595 - | allantoinase pyrB 3541893 - 3540931 - | aspartate carbamoyltransferase catalytic subunit TERM 4217 3541372 - 3541401 + g 84 -2.7 -5.31275 | opp_overlap 3541362, overlap 3541360 ATGCAGCACGTCGCC GACGATGGCGACC GTGA GGTTGCTGAAGTC TTTTTTGTAGTGGCG TERM 4218 3541729 - 3541746 + g 77 -2.5 -5.0538 | opp_overlap 3541722, overlap 3541720 3541725 GTTGAACACGCTCTT GCCGCGC AGCA GCGGGAC TTTTTTGACCTCGCG TERM 4219 3541833 - 3541858 + g 86 -5.3 -5.13741 | overlap 3541834 TGGACAGGCCTTCGG TGGAGAGCAGA TGGA TCAGCTCGCCG TTTTTATTGAGTTGG Pnap_3346 3542439 - 3541921 - | phosphoribosyltransferase TERM 4220 3542235 - 3542194 - G 86 -16.5 -3.1355 | GCCATTGACATCGAA TGGCAGCACGGTCTGGCCG CTGG CCGCCAGCCCGCGCTGCGA AAAGTCGTCGCGGTG Pnap_3347 3542902 - 3542432 - | Holliday junction resolvase YqgF TERM 4221 3542849 - 3542820 - G 86 -15.7 -3.55801 | opp_overlap 3542819 3542820 AGGAAGGTCTGGAAA CCCGCCGCCGG ATGAGGTG CCGGCGGCAGG CGGTTTTCGGGCCGG Pnap_3348 3543485 - 3542895 - | hypothetical protein TERM 4222 3543570 - 3543594 + H 75 -6.4 -4.66609 | opp_overlap 3543570 3543569 AATTGCGGCGCAAAG CAATTCAGGC GTCAG GCCCGGATTG TTTTTCACTACCATC TERM 4223 3544265 - 3544276 + G 72 -7.2 -4.12942 | opp_overlap 3544231 3544230, overlap 3544230 CCACTGGCAGCCAGG GCGC AGAA GCGC TTTTCGACGATTTCC TERM 4224 3544810 - 3544826 + G 77 -13.7 -3.36983 | TGGGCCGCCAGCACG GGCTGCG ATG CGCAGCC TTACTTCCGAATTTT TERM 4225 3544940 - 3544918 - g 76 -8.4 -4.11216 | opp_overlap 3544902 CCGGTACTGGCAAAA CTGCCCAAGG CTG CCTTGCACAG TCCGTGGCTGGCTTC Pnap_3349 3543643 - 3545076 + | deoxyribodipyrimidine photo-lyase Pnap_3350 3551047 - 3545135 - | CheA signal transduction histidine kinases TERM 4226 3549276 - 3549307 + g 73 -3.6 -4.78107 | gap 1, opp_overlap 3549261, overlap 3549278 GCGTCGCTGGCGTGT GCCGAGCGCCCCATC ATC GATGTGA-GCTCGTC TTTTTCCTCGTCGTA TERM 4227 3550220 - 3550210 - G 81 -2.4 -5.13343 | GAACGCAAAAGAAAA GCAG ATC CAGC GTCAGCCGTTCGGAG Pnap_3351 3553382 - 3551103 - | methyl-accepting chemotaxis sensory transducer TERM 4228 3551696 - 3551706 + g 73 -8.2 -4.08216 | opp_overlap 3551689 3551693 GGATGGAATTCATAC CGCC GAT GGCG TTTTGCACCGCCTGC TERM 4229 3553096 - 3553064 - G 95 -9.9 -4.66833 | TGCTAAGTGCAAAAA CTGTCACAACTGCCA GGA CAGCAACTGCGACAG CCAGCACCACCACCA Pnap_3352 3553949 - 3553419 - | putative CheW protein Pnap_3353 3554336 - 3553971 - | response regulator receiver protein Pnap_3354 3554779 - 3554336 - | response regulator receiver protein Pnap_3355 3554988 - 3554815 - | rubredoxin-type Fe(Cys)4 protein Pnap_3356 3555071 - 3556045 + | phosphomethylpyrimidine kinase type-1 TERM 4230 3556785 - 3556818 + G 71 -8.1 -3.85698 | gap 1, overlap 3556786 GACGAGGTGATGACG GGCTTT-CGCGTAGCC CTT GGCGGCGCGCAAAGCG TTTATGCCCAAAGCA TERM 4231 3557083 - 3557110 + G 74 -4.8 -4.56597 | gap 1, overlap 3557084 3557100 TCGTTGAAGGCCTGA CGCACGC-GGC GAACCAG GCCGGCGTGCC TTTTTGCGGCGACAG TERM 4232 3557100 - 3557144 + G 78 -5 -4.77036 | gap 2, overlap 3557084 3557083 CACGCGGCGAACCAG GCCG-GCGTGCC-TTTTTGCGG CGA CAGCGAAGGCGGCATGTTCGGC TTTTTCCTGCTGGGC Pnap_3357 3556026 - 3557354 + | glutamate-1-semialdehyde-2,1-aminomutase TERM 4233 3557465 - 3557478 + T 100 -9.5 -5.63103 | opp_overlap 3557445 3557465 TTTCTTATAAAAAAA GCGGC CCAG GCCGC TTTTTTTGATTCCGG TERM 4234 3557478 - 3557465 - T 100 -9.5 -5.60993 | opp_overlap 3557465, overlap 3557445 TTTCTTATAAAAAAA GCGGC CCAG GCCGC TTTTTTTGATTCCGG Pnap_3358 3559116 - 3557518 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Pnap_3359 3559408 - 3559172 - | Fis family transcriptional regulator Pnap_3360 3560475 - 3559405 - | nifR3 family TIM-barrel protein TERM 4235 3559826 - 3559842 + g 74 -5 -4.59109 | TCGGCGGCGGTGTAG GCCAGC ACGTC GCGGGC TTTTTCAGGGCTGTC TERM 4236 3560953 - 3560917 - g 72 -4.2 -4.56597 | gap 1, opp_overlap 3560919 3560920, overlap 3560918 3560919 CGGTGGCTTGAAAAA CTCGGCCCCAAGGCCTG TTTG CTGGCCTGGCTGCCG-G TCGTCGGCGACCCGC Pnap_3361 3560620 - 3561102 + | hypothetical protein Pnap_3362 3561854 - 3561099 - | RNA-binding S4 domain-containing protein TERM 4237 3561499 - 3561456 - G 72 -7.4 -4.14739 | gap 1, overlap 3561458 3561461 CCAGTCACCCGAAAA GACCAC-CAGGCCGCTGGC CGCAGTC GCCAGCGGCGTGAGCAGTT CGGAGCTGGAGAAAT TERM 4238 3561497 - 3561458 - G 70 -10 -3.67188 | gap 1, overlap 3561456 3561461 AGTCACCCGAAAAGA CCAC-CAGGCCGCTGGC CGCAGTC GCCAGCGGCGTGAGCAG TTCGGAGCTGGAGAA TERM 4239 3561493 - 3561461 - G 70 -12.7 -2.94337 | overlap 3561458 3561456 CACCCGAAAAGACCA CCAGGCCGCTGGC CGCAGTC GCCAGCGGCGTGA GCAGTTCGGAGCTGG TERM 4240 3561997 - 3561963 - R 100 -18.5 -5.06103 | overlap 3561964 3561965 ATAAGGCTTAAAAAA TGGGGCGGTGCCGGG GTTTT CCCGGCACCGCCCGC CAATTCAGGCTCAGG TERM 4241 3561996 - 3561964 - R 100 -22 -3.62577 | overlap 3561963 3561965 TAAGGCTTAAAAAAT GGGGCGGTGCCGGG GTTTT CCCGGCACCGCCCG CCAATTCAGGCTCAG TERM 4242 3561995 - 3561965 - R 100 -25.5 -2.76823 | overlap 3561964 3561963 AAGGCTTAAAAAATG GGGCGGTGCCGGG GTTTT CCCGGCACCGCCC GCCAATTCAGGCTCA Pnap_3363 3563099 - 3562008 - | translation-associated GTPase TERM 4243 3562538 - 3562521 - G 81 -6.9 -4.77036 | opp_overlap 3562514, overlap 3562523 GGTGATCAGGAAAAA CTGCTGC AGCA GCGGCAG CTCATCCTTGCTGAA TERM 4244 3563188 - 3563204 + r 74 -6.5 -4.36914 | overlap 3563170 GACGCTAAGCTTGCA CCCGG CTTTGTA CCGGG TTTTGTCCGGAAAGA Pnap_3364 3565067 - 3563277 - | sulphate transporter TERM 4245 3564214 - 3564188 - G 74 -14.5 -2.62735 | opp_overlap 3564177, overlap 3564176 ACACGCGCGACAGCA CGCTGGTGTCC GCAAA AGACACCAGCG CCACGGCCAGCCCGC TERM 4246 3564294 - 3564275 - G 81 -6.4 -4.7629 | overlap 3564279 TGATCAAGGGAAAAA CCAGGG CCGGCAAC CCCTGG GGAAGCGAGCCGAGG Pnap_3365 3565975 - 3565067 - | MOSC domain-containing protein TERM 4247 3566195 - 3566176 - g 76 -7.8 -4.36914 | gap 1, overlap 3566177 CCCGGCCCCAGAAAA CGCCGGCCG AAC CGGCC-ACG GCCGATGTACGCGCC Pnap_3366 3566037 - 3567170 + | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 4248 3567867 - 3567837 - g 78 -4.6 -4.72272 | overlap 3567840 GGCCTTCAGCAAAAA GTACAAGATCACCG GCA CGCCGACCCTGTTC TTTGCCGACGGCTCA TERM 4249 3567934 - 3567923 - g 87 -5.8 -5.13473 | opp_overlap 3567930, overlap 3567925 AGCAGATCGAAAAAA CGCT GGCC AGCG CCAAGGCGCCGTAAT Pnap_3367 3567211 - 3567948 + | putative thiol:disulphide interchange protein (periplasmic) TERM 4250 3567962 - 3567978 + F 83 -10.1 -4.16016 | AATTCCCGCCTCCCG CGCTTGC TGC GCAGGCG TTTATTGGAAAATAG TERM 4251 3568010 - 3568030 + F 79 -3.1 -5.14563 | GCCTCTTGTGCAAGC GGGGCATAC GTA GTTAGCTCC TTTTTTAATAGCAAA TERM 4252 3568284 - 3568268 - g 100 -12.3 -5.02074 | CGAGTTTTCAAAAAA CCTGCAG GGC CTGCAGG CGCATCAGGGCAGCC TERM 4253 3568421 - 3568445 + G 83 -7.7 -4.56597 | opp_overlap 3568410, overlap 3568423 CAATTCGGTGCGCAC CGCCTGGCTGG ATG CGAGCCGGGGG TTTTTCAACGGCACC TERM 4254 3568653 - 3568690 + G 74 -6.2 -4.46212 | gap 1, overlap 3568654 GAAATGGGGCCGTTC TGGAGCGGCAGCTTCAC CGCGC GTGGCG-TGCCGCACCG TTTTGTCGTGGCGGG Pnap_3368 3568092 - 3569894 + | peptidase M61 domain-containing protein TERM 4255 3570195 - 3570169 - g 72 -4.2 -4.66163 | overlap 3570171 ACCGGCAGCGAAAAA GCCTTTGCCGCC GGC GCCGACATCGGC GCCATGGCGAACTAC Pnap_3369 3569980 - 3570768 + | enoyl-CoA hydratase/isomerase TERM 4256 3570922 - 3570896 - f 100 -18.1 -4.61231 | opp_overlap 3570896 CCAGATTTGTAAAAA GCCCCGCAAGT TCATG ACTTGCGGGGC TTTTTGCTTGTGGGC TERM 4257 3570896 - 3570922 + F 100 -18.8 -4.93365 | opp_overlap 3570896 CCAGATTTGTAAAAA GCCCCGCAAGTT CAT GACTTGCGGGGC TTTTTGCTTGTGGGC Pnap_3370 3571070 - 3571687 + | hemolysin III family channel protein Pnap_3371 3571782 - 3572393 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Pnap_3372 3572510 - 3572947 + | hypothetical protein Pnap_3373 3573055 - 3574398 + | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 4258 3574601 - 3574548 - g 81 -13.9 -3.55563 | gap 3, overlap 3574558 3574559 ACCTGACCGTGCAAA GCCGCGACAACGCGGCGCGCGCGCTC GACCT GAGCG-GCGCG--GCGCAGTCGCTGC GCGAGCGCAGCCTGT TERM 4259 3574593 - 3574558 - g 82 -14.7 -3.32294 | gap 1, overlap 3574548 3574559 GCAAAGCCGCGACAA CGCGGCGCGCGCGCTC GACCT GAGCG-GCGCGGCGCA GTCGCTGCGCGAGCG TERM 4260 3574592 - 3574559 - g 80 -16 -2.59055 | gap 1, overlap 3574558 3574548 CAAAGCCGCGACAAC GCGGCGCGCGCGCTC GACCT GAGCG-GCGCGGCGC AGTCGCTGCGCGAGC Pnap_3374 3574388 - 3575851 + | integral membrane sensor signal transduction histidine kinase TERM 4261 3576074 - 3576041 - g 95 -21 -3.15544 | overlap 3576011 CGCCACCGCCAGCAA CGCCGTGCCGTCCG CGCCTT CGGCCGGCACGGCG CCCGCCTCCGACAAC Pnap_3375 3575835 - 3576548 + | hypothetical protein TERM 4262 3576727 - 3576755 + G 88 -17.3 -3.09327 | overlap 3576742 3576746 GGTGCTGAGCGATGT GCGCCTGCCCGGC AAG GACGGGCTGGCGC TGTTCGATGACATCC TERM 4263 3577681 - 3577648 - g 88 -16.1 -3.31144 | gap 1 GCGCCAGCTCTACAA CGTGGTCGAGCAGGTC TGC GCCCT-CTCGACCACG CCGCTGGTGCCGCTG Pnap_3376 3576545 - 3577933 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 4264 3578021 - 3578035 + F 71 -4.2 -4.61527 | opp_overlap 3578021, overlap 3578009 3578031 GCTGGCGACAAAACC CGGG GTTTTCG CCCG TTTTTCGGCCATTTT TERM 4265 3578174 - 3578191 + G 74 -4.7 -4.58395 | opp_overlap 3578164, overlap 3578176 3578177 CAAACCTGCCGGCGG GCTGCCC TTGC GGGCGTC TTTTTCCGCCCTGGC TERM 4266 3579312 - 3579298 - g 86 -7 -5.00616 | overlap 3579299 GGGTGCCCGAAAAAA TGCCGG CAG CCGGCC AGCCGCTCGACCTGG TERM 4267 3579311 - 3579299 - g 70 -10.5 -3.60048 | overlap 3579298 GGTGCCCGAAAAAAT GCCGG CAG CCGGC CAGCCGCTCGACCTG TERM 4268 3579437 - 3579416 - g 74 -12.9 -3.2614 | opp_overlap 3579432, overlap 3579390 CATCGGCTACAGCAA GCCCGGCGC CGAC GCGCTGGGC CAGCAGGTCCAGTTT TERM 4269 3579432 - 3579449 + G 76 -9.1 -3.98236 | opp_overlap 3579416 CCCGGCGCCGACGCG CTGGGCC AGCA GGTCCAG TTTGTCATCGACTTT mdoG 3578136 - 3579719 + | glucan biosynthesis protein G TERM 4270 3580172 - 3580150 - g 75 -12 -3.61398 | overlap 3580164 GCTGTCGGCCAAGAA GGTCCAGCAC CAC ACGCTGGACC CGTCCACGCGCACCG Pnap_3378 3579791 - 3581686 + | glucosyltransferase MdoH TERM 4271 3581758 - 3581706 - T 100 -23.6 -3.56568 | opp_overlap 3581709, overlap 3581707 3581739 CAACCAGTCCTGAAA CGCCGACGGGCGCAAGCAACTATC AAAAA GATAGCTGCTTGCGCCCGTAGTCA TTGCGCAAACACCTG TERM 4272 3581757 - 3581707 - T 100 -24.9 -2.73619 | opp_overlap 3581709, overlap 3581706 3581739 AACCAGTCCTGAAAC GCCGACGGGCGCAAGCAACTATC AAAAA GATAGCTGCTTGCGCCCGTAGTC ATTGCGCAAACACCT TERM 4273 3581709 - 3581755 + T 100 -23.9 -2.70932 | opp_overlap 3581707 3581706 3581739 CCAGTCCTGAAACGC CGACGGGCGCAAGCAACTATC AAAAA GATAGCTGCTTGCGCCCGTAG TCATTGCGCAAACAC Pnap_3379 3583155 - 3581797 - | signal recognition particle protein TERM 4274 3582936 - 3582981 + g 75 -3.3 -4.8622 | gap 3, opp_overlap 3582928 3582927 TGACAATGCCGACCA GCGCCTGGCCCGGCGAGAGCGA GCCCA TCAC-CTC-CTGGCCCAG-CGC TTTTTCCTTGACGCG TERM 4275 3583750 - 3583767 + G 74 -5.5 -4.52703 | overlap 3583741 CGAACGCCTGACCTT CCGGTTT GTCG AGGCCGG TTTTGTGCTGCTTTC Pnap_3380 3583232 - 3584032 + | cytochrome c assembly protein Pnap_3381 3584029 - 3584274 + | hypothetical protein TERM 4276 3585811 - 3585828 + G 79 -9.1 -4.12532 | opp_overlap 3585808 3585809 TCTCATCCGAAAGCC GCTCCAG CGGG CTGGGGC TTTATATCTGCCGCG Pnap_3382 3584271 - 3585989 + | integral membrane sensor signal transduction histidine kinase Pnap_3383 3585996 - 3587423 + | two component, sigma54 specific, Fis family transcriptional regulator Pnap_3384 3587410 - 3588012 + | N-acetyl-anhydromuranmyl-L-alanine amidase TERM 4277 3588090 - 3588080 - f 70 -6.8 -4.13767 | overlap 3588081 GTTTGCAGGCCAAAA CCTG CGG CAGG CCGCACCAGTGCTGG TERM 4278 3589213 - 3589203 - g 81 -6.8 -4.74801 | overlap 3589204 3589207 CAAGGGCATCAAAAA CGAG CTG CTCG ACGAAAAACTCCAGC TERM 4279 3589829 - 3589809 - g 78 -6.7 -4.57569 | overlap 3589811 3589812 GGAGCTGCGCAAAAA CACCGGCGA CGA CCGCCGCCG CACGCACGACATGAA TERM 4280 3590287 - 3590276 - g 72 -2.2 -4.68705 | ACAAGCTGAAGAAAA CCAT CACC ACGG CCATGCGCATGCTGG Pnap_3385 3588421 - 3591324 + | ribonucleotide-diphosphate reductase subunit alpha TERM 4281 3591370 - 3591329 - f 100 -14.6 -4.20367 | opp_overlap 3591326 CTTGCCAATAAACAA GCAGTGAATCGCGCAATA GCCATT TTTCGCACGATTCACTGC GCGTTCAATGCAAAA TERM 4282 3591767 - 3591722 - g 76 -6.1 -4.56597 | gap 1, overlap 3591708 3591724 3591725 3591761 TGGGCCTGGGAAAAA TACCTGGCCTCCTGCGCCAACC ACT GGATGCCGCAGGAAGTCAA-CA TGACGCGCGACATCG TERM 4283 3591766 - 3591724 - g 74 -9 -3.90048 | overlap 3591708 3591722 3591725 3591761 GGCCTGGGAAAAATA CCTGGCCTCCTGCGCCAACC ACT GGATGCCGCAGGAAGTCAAC ATGACGCGCGACATC TERM 4284 3591765 - 3591725 - g 70 -12.5 -2.93708 | overlap 3591708 3591724 3591722 3591761 GCCTGGGAAAAATAC CTGGCCTCCTGCGCCAACC ACT GGATGCCGCAGGAAGTCAA CATGACGCGCGACAT Pnap_3386 3591482 - 3592645 + | ribonucleotide-diphosphate reductase subunit beta TERM 4285 3592910 - 3592888 - g 91 -3.3 -5.42259 | overlap 3592876 3592874 3592889 CCAGCGGCAAAAAAA GCCGCTCCT GCGAA AGCACCGGC AAAAAAAGTAACGGC TERM 4286 3592947 - 3592922 - g 73 -8.9 -4.03885 | CGGCAAAAAAAGTAA CGGCGGCACCA GCAT CGGTGGCACCG GCTGAAACGGCGGCG TERM 4287 3593005 - 3592988 - g 100 -7.7 -5.40072 | overlap 3593000 3593002 CGGCGGCTAAAAAAA CAGCTGC AAAA ACAGCTG CAAAAACAGCGGTAA TERM 4288 3593177 - 3593152 - g 93 -7.5 -5.00616 | overlap 3593155 3593166 3593170 GCGCCTGCCAAAAAA GCAGCAGCTGA AAAG CCAGCCGCTCC AGAAGCAGCCGCCCC TERM 4289 3593237 - 3593212 - g 78 -3.2 -5.08824 | overlap 3593213 3593214 3593226 CCGGCAGCCAAAAAA CCGGCCGC TAAAAAGGCT GCGGCCAA GACGACAGCCGACAC TERM 4290 3593247 - 3593226 - g 78 -6.5 -4.56775 | gap 1, overlap 3593214 3593213 3593212 3593243 3593245 ACCGGCCGCTAAAAA GGCTG-CGGC CAA GACGACAGCC GACACTGCCAAAGCC TERM 4291 3593321 - 3593305 - g 73 -2.9 -4.70879 | overlap 3593317 3593318 GTGAAAGCCGAAAAA GCCGA GAAAAAA CCGGC GGCCAAAACGCCCGC TERM 4292 3593335 - 3593317 - g 85 -3 -5.28826 | overlap 3593305 3593318 AAAGCCGAGAAAAAA CCGGCG GCCAAAA CGCCCG CAGCCAGCTCGACGC Pnap_3387 3592855 - 3593415 + | histone protein TERM 4293 3593439 - 3593462 + T 100 -11 -4.74103 | opp_overlap 3593439 CGCCTGATGCATCAA GCCCGATGTC GCAA GATGTCGGGC TTTTTCAATTCAGCC Pnap_3388 3594467 - 3593544 - | ribokinase-like domain-containing protein TERM 4294 3593858 - 3593885 + g 70 -12 -3.25015 | gap 1, opp_overlap 3593844 3593858 ATTCGGCGCACGACA GGCCGG-TGCGGT CGC ACAGCATCCGGCC TTCGTAGTCGTTGAC Pnap_3389 3595476 - 3594487 - | Zinc finger-domain-containing protein TERM 4295 3594994 - 3595043 + g 78 -14.6 -3.06679 | gap 3, opp_overlap 3595003 GCGGACCAGGGGTGA TGTCCAGAAGTCG-TTTTG-CCGCG CTT CGCGGACAAAAGCGACTTC-GGGCG TTGCCTCGGGCTCTT TERM 4296 3595035 - 3595003 - G 72 -12.2 -3.31144 | gap 2, opp_overlap 3594994 GGGTGATGTCCAGAA GTCG-TTTTG-CCGCG CTT CGCGGACAAAAGCGAC TTCGGGCGTTGCCTC Pnap_3390 3596435 - 3595542 - | ribosomal protein L11 methyltransferase Pnap_3391 3597906 - 3596557 - | acetyl-CoA carboxylase, biotin carboxylase Pnap_3392 3598426 - 3597980 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 4297 3598015 - 3598025 + g 73 -8.2 -4.07885 | opp_overlap 3597999 3597997, overlap 3597999 GCTGGCCGTATTCCA CGGC CTG GCCG TTTTCGGAAAGAATC TERM 4298 3598677 - 3598667 - R 77 -8.2 -4.08945 | ACCAGCCCGGGAAAA CCCG CCC CGGG GGAAGGAAGCAAACC Pnap_3393 3599280 - 3598762 - | redoxin domain-containing protein Pnap_3394 3599895 - 3599299 - | hypothetical protein TERM 4299 3600556 - 3600571 + G 74 -6 -4.46212 | GGATCCTGGAATGCG CCGGCC TGCA GCCCGG TTTTCTGATCGGCGG Pnap_3395 3600126 - 3601553 + | UDP-N-acetylmuramate Pnap_3396 3602862 - 3601660 - | DnaJ domain-containing protein TERM 4300 3602158 - 3602192 + g 100 -7.8 -5.55001 | gap 1, overlap 3602154 3602153 GTCGGCGTCTTCCTG CTCCTGC-CCGGCCT TGATCT GGGCCGGCGTGGGGG TTTTCTTTTTTCTTC Pnap_3397 3603307 - 3602996 - | hypothetical protein TERM 4301 3603394 - 3603407 + r 87 -8.1 -4.67697 | overlap 3603390 CAGCGCCTTGGTGCG CCTGC GGCT GCAGG TTTATTATTTTGCCC Pnap_3398 3604533 - 3603412 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 4302 3603825 - 3603835 + g 74 -2.4 -4.82901 | GGGTTTGCACAATCG CGAC CTG GCCG TTTTTGTGGACCGAC TERM 4303 3604629 - 3604612 - R 100 -14.1 -6.10489 | opp_overlap 3604612 AAGGGCAAAAAAAAA CCGCCGG GTGG CCGGCGG TTTTTGGAGATTCGG TERM 4304 3604612 - 3604629 + r 100 -14.1 -4.62471 | opp_overlap 3604612 AAGGGCAAAAAAAAA CCGCCGG GTGG CCGGCGG TTTTTGGAGATTCGG Pnap_3399 3606307 - 3604781 - | peptidase U62, modulator of DNA gyrase Pnap_3400 3607498 - 3606344 - | rod shape-determining protein RodA TERM 4305 3606987 - 3606967 - G 100 -5.3 -5.75342 | opp_overlap 3606981, overlap 3606970 GGCCGGCAAAAAAAA TCACCGCCA GGC CGGCGGCCA GCACCAGGAGCGACG TERM 4306 3607311 - 3607267 - G 74 -5 -4.62069 | gap 2, overlap 3607270 3607306 GCGGCACGGCAAAAA CCATCA-GC-CGCTGCGGCGGA ACC TGCGCCACCACGAACATGATGG CGCCGGCAATCAGCA TERM 4307 3607458 - 3607440 - G 76 -7.4 -4.2717 | overlap 3607426 AGCAGGCCATCAAAA CCCTGC AGCACAG GCAGGG CTCGCTGGTAAAGGG TERM 4308 3607544 - 3607559 + H 78 -2.4 -5.1861 | overlap 3607531 3607530 CCCGCAGGCTGAAGG GGCATC ATCC GGCGCC TTTTTTACTACTAAA Pnap_3401 3607693 - 3608277 + | hypothetical protein TERM 4309 3608827 - 3608816 - g 71 -5.8 -4.30014 | opp_overlap 3608816, overlap 3608817 GTGAGCAACCCAAAA TCGC CCAA GCGA TCTCTTGGATGGATA Pnap_3402 3608525 - 3609292 + | IS891/IS1136/IS1341 family transposase Pnap_3403 3609328 - 3610386 + | transposase, IS4 family protein Pnap_3404 3610407 - 3610697 + | transposase, IS605 OrfB TERM 4310 3611401 - 3611425 + G 93 -8.5 -5.06414 | CGGCGCCATTGCCTC GCCCTACCAGT TCC ACTGGAAGCGC TTTTTGTTCGAGAAC TERM 4311 3611925 - 3611913 - g 70 -10.5 -3.55622 | TTGAAGCCGCCCAAA GCGCG CCA CGCGC CGACGTTCAATGGGG Pnap_3405 3610727 - 3612850 + | ribonuclease II TERM 4312 3612966 - 3613004 + G 76 -6.5 -4.42386 | opp_overlap 3612938, overlap 3612967 3612970 GCAGATTGCCCTGGG TGTCTCGCTGGCTGCGC ATGCG GCGCTGCTGGCGGTGCG TTTTGTCGATCCGGA TERM 4313 3613175 - 3613153 - g 78 -6.8 -4.59773 | GGCGAGCTTGAAAAA GGCCGCGCCA CCT CGCCGCTGCC GCCGGCCCTGGTGAT Pnap_3406 3612874 - 3613788 + | TonB family protein Pnap_3407 3613839 - 3614699 + | shikimate 5-dehydrogenase TERM 4314 3615004 - 3614980 - g 86 -12.8 -4.08216 | overlap 3614995 GGACGCGCTGGAAAA GGCCTGGGAG AAAAA CACCCAGGCC GAGGAACGCGCCGCG TERM 4315 3615037 - 3614995 - g 74 -2.4 -4.82901 | overlap 3614980 3615011 GGCCTGGGAGAAAAA CACCCAGGCCGAGGAACGCG CCG CGCAATCCATGAGCCGGCTG GCCGAGGGCAAGTCC TERM 4316 3615413 - 3615452 + G 91 -4.8 -5.38348 | gap 1, overlap 3615414 CGCGCCCGGACCATC GCGGCGCGCATGG-GCGGC GTG GAAGTGCCATGAGCGCCGA TTTTTTCATCTTTTT Pnap_3408 3614696 - 3615445 + | monofunctional biosynthetic peptidoglycan transglycosylase TERM 4317 3615875 - 3615864 - g 100 -7.2 -5.37593 | overlap 3615865 3615866 CTGCAAATGAAAAAA GCCG TGGC CGGC TATGGCAAGGCCGGC Pnap_3409 3615531 - 3616079 + | crossover junction endodeoxyribonuclease RuvC Pnap_3410 3616269 - 3616093 - | hypothetical protein TERM 4318 3616310 - 3616343 + r 90 -5.1 -5.1861 | GCGGCGCCTTACCAG GCGCGCGGCAGGGTT GAAA AACCCTTGGGAGCGC TTTTTTCGTCGTCGA lpxC 3617226 - 3616303 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 4319 3617370 - 3617320 - R 100 -14.7 -4.19238 | gap 1, overlap 3617321 3617367 GTGGCAATCCGAAAA TGGCAGGCCATGCCCCAGGCCTGC CGGG GCAGGCCTGGGCCAACGCATG-CA CGGTCAGTCGGCCTG TERM 4320 3617370 - 3617321 - R 100 -16.3 -3.11222 | overlap 3617320 3617367 TGGCAATCCGAAAAT GGCAGGCCATGCCCCAGGCCTGC CGGG GCAGGCCTGGGCCAACGCATGCA CGGTCAGTCGGCCTG Pnap_3412 3618558 - 3617374 - | cell division protein FtsZ TERM 4321 3617973 - 3617983 + g 86 -8.2 -4.57569 | overlap 3617971 TGATTTCGGCGATGC CGCC AAC GGCG TTTTTCAGCACGTCG TERM 4322 3618352 - 3618376 + g 74 -9.9 -3.7941 | overlap 3618355 CTTGCTGCCGGCGCC CAGCCCGCTGG AGC CCAGCTGGATG TTCTTGTGCGCGCTG Pnap_3413 3619929 - 3618700 - | cell division protein FtsA TERM 4323 3618742 - 3618759 + g 77 -4.1 -4.84017 | gap 1 GACCCGGCCAAAGGC GCTGTGCA TGC TGC-CGGC TTTTTGTGACACCTT Pnap_3414 3620725 - 3619934 - | polypeptide-transport-associated domain-containing protein Pnap_3415 3621711 - 3620734 - | D-alanine--D-alanine ligase murC 3623144 - 3621708 - | UDP-N-acetylmuramate--L-alanine ligase TERM 4324 3621892 - 3621875 - G 71 -5.5 -4.25104 | overlap 3621876 TGCTGTCCACGAAAA CCGGC TCGACCTT GCCGG CCACGCGCAGGGCAC Pnap_3417 3624223 - 3623141 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 4325 3623227 - 3623244 + g 91 -6.3 -5.27923 | gap 1, opp_overlap 3623230, overlap 3623230 GTAGCGCAGACTGCA CA-AGCGC AAG GCGCTCTG TTTTTTGTAGCATTG TERM 4326 3624099 - 3624050 - G 71 -4.8 -4.4078 | gap 2, opp_overlap 3624058, overlap 3624051 GGTTTCGAAGGAAAA TCCGCGCGGC-GGTACCAGC-TGG CTTT CCATGCTGGGGCGGGCCGCGCTGC CCTTGCCGCCCAGCC Pnap_3418 3625485 - 3624220 - | cell division protein FtsW TERM 4327 3625463 - 3625444 - G 81 -10 -4.24002 | overlap 3625437 GCCGAAACCTGAAAA CCAACCGG ATCT CCAGTTGG AAGGACGTGTTTTGG Pnap_3419 3626993 - 3625482 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 4328 3625644 - 3625667 + g 72 -11.8 -3.29511 | gap 1 CAGGCTGACGGCTTC CTGCATGGACG CGG CGTCCA-GCAG TTCTACCCGGCTGCC Pnap_3420 3628168 - 3626990 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 4329 3627954 - 3627925 - G 73 -6.3 -4.26076 | gap 1, opp_overlap 3627925 3627923, overlap 3627926 CGATGGCCAGCAAAA TCAGCACGCC-GCC CAT GGTTGGCGTGCCGC TCTTGCTCAAATGTG Pnap_3421 3629558 - 3628158 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase Pnap_3422 3631045 - 3629555 - | UDP-N-acetylmuramyl-tripeptide synthetases TERM 4330 3629954 - 3629923 - G 83 -7.3 -4.66609 | gap 1, opp_overlap 3629930 3629932, overlap 3629925 3629928 CACCGCAGCCAAAAA CACACCAGAGCCGG CCGCC CCGGCCCTG-TGCA ACCGGGTTGAGCGCC TERM 4331 3629952 - 3629925 - G 76 -9.9 -3.94812 | gap 1, opp_overlap 3629930 3629932, overlap 3629923 3629928 CCGCAGCCAAAAACA CACCAGAGCCGG CCGCC CCGGCCCTG-TG CAACCGGGTTGAGCG Pnap_3423 3632787 - 3631051 - | peptidoglycan glycosyltransferase TERM 4332 3632095 - 3632083 - G 82 -3.3 -5.1287 | CTGATAGGCAAAAAA CTGCA CCT TGCTG TCAACGCTGAGCTGG TERM 4333 3632723 - 3632735 + g 71 -6.2 -4.25104 | overlap 3632715 ACGATGAGCTTGCTG CGCC AGACA GGCG TTTTGCTGGCCAGCA TERM 4334 3632801 - 3632832 + r 74 -10.8 -3.51825 | gap 1 ATGGCTGTGCCTTCT GCCCGGCAGCCGACG CCA CATCGGCTGC-GGAC TTGTACTTGACGTAC Pnap_3424 3633092 - 3632784 - | cell division protein FtsL Pnap_3425 3634077 - 3633157 - | S-adenosyl-methyltransferase MraW TERM 4335 3633415 - 3633432 + g 73 -11.3 -3.64487 | opp_overlap 3633413 CACCTTGAGCGAAGC CTGCAGC GCCT GCTGCAG TTCTTCGAGCTCTGC Pnap_3426 3634536 - 3634084 - | cell division protein MraZ Pnap_3427 3636920 - 3635118 - | hypothetical protein TERM 4336 3636681 - 3636663 - G 81 -4.5 -5.00616 | opp_overlap 3636677, overlap 3636668 GCTGCTTTGAAAAAA TGAAGGC GTACT GCCTGCA CCCGGCGCGGTTTCA Pnap_3428 3637793 - 3636957 - | TraR/DksA family transcriptional regulator TERM 4337 3637106 - 3637117 + g 72 -4.4 -4.63486 | opp_overlap 3637110, overlap 3637098 3637099 3637109 AATCGATGCGGGCAA TCGA CTGC TCGA TTTTCTTGAGCAGCT Pnap_3429 3639118 - 3638066 - | cobalamin synthesis protein, P47K TERM 4338 3638794 - 3638823 + g 73 -11.4 -3.64703 | gap 1 TGAAAAAGGTCTGCG CCACCGGGCCGGG ATCGG CCAGGCC-GGTGG TTTCAATCACCACGC TERM 4339 3639263 - 3639241 - R 73 -9 -3.87869 | opp_overlap 3639240 3639239 CGAATTGTTCACAAA CTGCCTGTCG ATG CGTCAGGCGG ACTTTCAGAAAGGTT TERM 4340 3639327 - 3639288 - R 95 -12.8 -4.08064 | gap 1 AAGGTTTGGCCAAAA CGGCGCTTGGCAGC-CTGC ACC ACAGGGCCGCCCAGCGCTG TCGCAAGCCAGGGGC Pnap_3430 3639594 - 3639268 - | hypothetical protein Pnap_3431 3639774 - 3641252 + | GntR family transcriptional regulator Pnap_3432 3642460 - 3641276 - | PUA domain-containing protein Pnap_3433 3643555 - 3642518 - | phage integrase family protein Pnap_3434 3644268 - 3643555 - | hypothetical protein TERM 4341 3644268 - 3644284 + g 100 -4.3 -5.58454 | GTTGGACGGGATTCA TGGTGGC CTT GTCTCCA TTTTTTTAGTCTGCA Pnap_3435 3645215 - 3644328 - | diaminopimelate epimerase TERM 4342 3644988 - 3644964 - G 78 -10 -4.03204 | gap 1, overlap 3644956 CACGAAACGCACAAA GCAGCGCGCGC CGTT GC-CGCACTGC TCGACCTCGCCGCCG Pnap_3436 3646241 - 3645300 - | LysR family transcriptional regulator TERM 4343 3645402 - 3645389 - G 76 -5.9 -4.56597 | CGGTCGCGCGAAAAA GCCGG ACTT CCAGC GGAATGCTCCATTCG TERM 4344 3645812 - 3645795 - G 83 -6.3 -4.82667 | gap 1, overlap 3645788 GTAGCACAGCAAAAA CTGCA-CG CGG CGCTGCAG CATGAGTTCTTCACA TERM 4345 3645956 - 3645910 - G 90 -2.4 -5.41143 | gap 3 CAGCGCGGAAAAAAA GCCAGCGACAGCACATGC-GT GGCCGCGA ACTGCA-G-GCTGCGGCTGGC CTGCTCGTGCGCCTC Pnap_3437 3646347 - 3647279 + | dihydrodipicolinate synthetase TERM 4346 3647494 - 3647484 - g 73 -6.8 -4.37886 | opp_overlap 3647471 CCAGCTGGCACAAAA GCTC AGC GAGC AGATGGGCCAGCCCT TERM 4347 3647560 - 3647523 - g 73 -8.3 -4.07568 | gap 1 CTTCGTGGTTGAAAA CCGTGCCGGCGGCAA-CG GGA CGATTGGCGCCGACGCCG TGGCCAAGTCCCCGG Pnap_3438 3647308 - 3648288 + | hypothetical protein Pnap_3439 3648278 - 3648985 + | short-chain dehydrogenase/reductase SDR TERM 4348 3649324 - 3649309 - g 76 -6.8 -4.41494 | gap 1, overlap 3649310 GATGTCCAACGAAAA GCCG-GG CGG CCACGGC GAGCGCTCGGTGGCG TERM 4349 3650107 - 3650089 - g 72 -8 -4.14392 | CGTCAAGGTGGAAAA CGGCTACG TGA CGCTGCCG CCGCTGCCCGGCATC Pnap_3440 3649010 - 3650176 + | mandelate racemase/muconate lactonizing protein Pnap_3441 3650287 - 3651921 + | beta-lactamase domain-containing protein TERM 4350 3652808 - 3652790 - g 78 -3 -5.01732 | overlap 3652794 AATTGCTGGAAAAAA TCAACCAG GGC CTGGCCGG CATCAAGGAAGACGG Pnap_3442 3652048 - 3652905 + | extracellular solute-binding protein Pnap_3443 3653807 - 3652911 - | LysR family transcriptional regulator TERM 4351 3653320 - 3653299 - G 81 -2.2 -5.24129 | gap 1, overlap 3653303 GGCGTGCAGAAAAAA CTCATGGGC GTGCT GCCCA-GCG GGTGGTTGAAGGCCT Pnap_3444 3653971 - 3654510 + | BadM/Rrf2 family transcriptional regulator TERM 4352 3655306 - 3655287 - g 73 -12.8 -3.18681 | CGCCAACGGCATGAA GGGCGCGA TTGC CCGCGCCC AGGAACTGATCGCCG Pnap_3445 3654925 - 3655842 + | cysteine synthase A TERM 4353 3655848 - 3655903 + F 79 -13.9 -2.75844 | gap 1, opp_overlap 3655845, overlap 3655836 3655845 3655851 CCCGGCCTGAAACCC GTCGGCCTGTTCTCCTGCCGCCGGGT TCAGT GCCCGGCGGCAGGCGA-TGCGCAGGC CTTTAAAATCCCCGC TERM 4354 3655851 - 3655904 + F 95 -14.7 -3.60098 | gap 3, opp_overlap 3655845, overlap 3655836 3655845 3655848 GGCCTGAAACCCGTC GGCCTGTTC-TC-C-TGCCGCCGGGT TCAGT GCCCGGCGGCAGGCGATGCGCAGGCC TTTAAAATCCCCGCT Pnap_3446 3655894 - 3657630 + | FAD dependent oxidoreductase TERM 4355 3657681 - 3657709 + F 70 -6.5 -4.08767 | overlap 3657682 3657685 TCACGGTTTCACACC GCCAGCGCCGCCC AAT GGGTGGCGCTCCA TTTTCGAAACGTCGC TERM 4356 3657685 - 3657705 + F 86 -16.1 -2.74605 | overlap 3657682 3657681 GGTTTCACACCGCCA GCGCCGCCC AAT GGGTGGCGC TCCATTTTCGAAACG Pnap_3447 3657765 - 3658604 + | hypothetical protein TERM 4357 3658628 - 3658610 - T 100 -8.8 -5.00884 | AGCGCCCTGAAAAAA GCCGGC GCTGAAG GCCGGC TGCTGAATGAGGCGA Pnap_3448 3659635 - 3658760 - | heat shock protein HtpX TERM 4358 3659169 - 3659199 + g 71 -9.6 -3.72576 | overlap 3659170 TGGATCAGCGTCATC GTGACCATGTCGCC ATT GGCGACGTGGGCGA TTTCATGACCCAGCA TERM 4359 3659170 - 3659198 + g 70 -13.1 -2.83403 | overlap 3659169 GGATCAGCGTCATCG TGACCATGTCGCC ATT GGCGACGTGGGCG ATTTCATGACCCAGC Pnap_3449 3660484 - 3659810 - | putative transmembrane protein TERM 4360 3660249 - 3660270 + g 100 -3 -5.84381 | gap 1, opp_overlap 3660252, overlap 3660209 3660249 3660250 GCCGTGGCTGCGAAT TCAGCC-GC ATGCA GCTGGTTGA TTTTTTTCTTGGTCC Pnap_3450 3661680 - 3660553 - | hypothetical protein TERM 4361 3660998 - 3660974 - G 100 -12.1 -5.00616 | overlap 3660975 CTTTTGTCGAAAAAA CCGTGCCGCTG CAA CACCGGCACGA CATGGCACAGCTGCT TERM 4362 3660997 - 3660975 - G 81 -13.4 -3.60048 | overlap 3660974 TTTTGTCGAAAAAAC CGTGCCGCTG CAA CACCGGCACG ACATGGCACAGCTGC TERM 4363 3661405 - 3661441 + g 100 -10.2 -4.82901 | opp_overlap 3661401 3661404 TTGCTGGAAATGCAG CGCCACCG-CGTCGGC GATCAGG GCCG-CGTCGGTGGTG TTTTTCTGCAGCGGC Pnap_3451 3662744 - 3661677 - | dihydroorotase Pnap_3452 3662871 - 3663410 + | tripartite ATP-independent periplasmic transporter DctQ TERM 4364 3663522 - 3663555 + G 74 -2.1 -4.84761 | overlap 3663523 3663524 TGGCCAATGGCGATT CACAGTGGTTCGGCC TGCT GGCCGTGCCGCAGAA TTTTTATGCCGGTCT TERM 4365 3663666 - 3663722 + G 79 -10.8 -3.90048 | TGGTCAACTTTGCCG TCGCCATCGTCGGGCGCGGCC-CCGGCA TGC TGCCGCTGGTGGCGATTG-CGGTGGCGA TGTTTTTGGGCGGCA Pnap_3453 3663407 - 3664705 + | TRAP dicarboxylate transporter, DctM subunit Pnap_3454 3664741 - 3665769 + | TRAP dicarboxylate transporter, DctP subunit TERM 4366 3665816 - 3665786 - T 100 -18.4 -3.05384 | opp_overlap 3665787 3665793, overlap 3665793 CGCTTGCCGATTGAA TGAAAAAGCCCCGC AAT GCGGGGCTTTTTCT TGTTTGCAACTGAAA TERM 4367 3665787 - 3665815 + T 100 -21.9 -3.92542 | opp_overlap 3665786 3665793, overlap 3665793 GCTTGCCGATTGAAT GAAAAAGCCCCGC AAT GCGGGGCTTTTTC TTGTTTGCAACTGAA TERM 4368 3665793 - 3665809 + T 100 -15.1 -5.38549 | opp_overlap 3665786 3665793, overlap 3665787 CGATTGAATGAAAAA GCCCCGC AAT GCGGGGC TTTTTCTTGTTTGCA TERM 4369 3665809 - 3665793 - T 100 -15.1 -4.88407 | opp_overlap 3665793 3665787, overlap 3665786 CGATTGAATGAAAAA GCCCCGC AAT GCGGGGC TTTTTCTTGTTTGCA Pnap_3455 3666572 - 3665835 - | ABC transporter related Pnap_3456 3667298 - 3666630 - | polar amino acid ABC transporter, inner membrane subunit Pnap_3457 3667965 - 3667300 - | polar amino acid ABC transporter, inner membrane subunit TERM 4370 3668111 - 3668080 - R 100 -14.4 -4.62069 | opp_overlap 3668080, overlap 3668084 TCTCCACCCTAAAAA CAAACCCCGCGCGC AACC ACGAGCGGGGTCTG TTGATCTGGGTGGCC TERM 4371 3668080 - 3668111 + r 74 -11.5 -3.2794 | opp_overlap 3668080 3668084 TCTCCACCCTAAAAA CAAACCCCGCGCG CAACCA CGAGCGGGGTCTG TTGATCTGGGTGGCC TERM 4372 3668107 - 3668084 - R 100 -11.6 -4.87389 | opp_overlap 3668080, overlap 3668080 CACCCTAAAAACAAA CCCCGCGCGC AACC ACGAGCGGGG TCTGTTGATCTGGGT Pnap_3458 3669030 - 3668131 - | extracellular solute-binding protein Pnap_3459 3670449 - 3669472 - | LysR family transcriptional regulator Pnap_3460 3672434 - 3670569 - | ABC transporter related TERM 4373 3670674 - 3670655 - G 82 -15 -3.28712 | CGTTGGCGGCCAGAA GCGCGGCA TGGC TGCCGCGC TCGACGATGCGGCCG TERM 4374 3670862 - 3670890 + g 76 -9.5 -4.07568 | overlap 3670860 CCGGCGGGTTTTTCA GCAGCGTGCGG GCAATCG CCACGCGCTGC TTTTCGCCGCCCGAC TERM 4375 3671184 - 3671233 + g 71 -12.7 -3.01712 | gap 1, opp_overlap 3671183, overlap 3671144 3671143 AAAACGGTAGAGCAG CCG-GGCCAGCGTCGATTTGCCGG CGC CCGACGAGCCGACGACGGCCACGG TCTTGCCCGGCGGAA Pnap_3461 3672511 - 3672897 + | regulatory protein, MerR TERM 4376 3673790 - 3673773 - g 95 -9.9 -4.56775 | overlap 3673780 ACCCGGCGTCAAAAA GCGCAAA TGCA TTTGCGC ACCATCGCTTTTCAA Pnap_3462 3672894 - 3674261 + | hypothetical protein TERM 4377 3674616 - 3674667 + G 79 -13.9 -3.53012 | opp_overlap 3674571, overlap 3674628 CCTGGCCGTCGTGAC GCGCATCGGC-ACCACCTCGATC ACGGTGCA GGTCGAGGTGTTTGCCGA-GCGC TTTCGCGCGCAGGGC Pnap_3463 3674299 - 3674766 + | thioesterase superfamily protein TERM 4378 3675036 - 3675025 - g 73 -3.6 -4.72986 | overlap 3675030 GAGCGCGAGCAAAAA GGCA AGGC CGCC GGCGTGCGCACGCAC TERM 4379 3675305 - 3675316 + G 76 -5.8 -4.63527 | overlap 3675285 TGCTCAGCACCTTGC TGGC GCTG GCCA TTTTTACCCTGATGC Pnap_3464 3674875 - 3675405 + | MgtC/SapB transporter Pnap_3465 3675882 - 3675439 - | hemerythrin HHE cation binding domain-containing protein TERM 4380 3676783 - 3676826 + G 78 -5 -4.73388 | gap 1 ATCATGGCCAGGGTC GGCCAGTGATCGC-CCTGCCC GAT GCGCTGGCGCGGGTGCAGGCC TTTTTCATGGAGCTT Pnap_3466 3676083 - 3677039 + | NAD-dependent epimerase/dehydratase Pnap_3467 3677079 - 3677774 + | glutathione S-transferase domain-containing protein TERM 4381 3677868 - 3677883 + G 77 -2.5 -5.03314 | GCGCGACGCCCGAAG CCTTG ACGGCG CAGGG TTTTTTGCCGGTGGG TERM 4382 3677974 - 3677944 - g 86 -16.1 -3.1372 | overlap 3677942 GACCCGCGAGGAATA CGCGCTGGCGCGC ACCGA GCGCAACAGCGCG CGCGGCTACCGGGGA Pnap_3468 3677771 - 3679045 + | metal dependent phosphohydrolase Pnap_3469 3679616 - 3679050 - | hypothetical protein TERM 4383 3679612 - 3679595 - G 100 -12.7 -5.75342 | TTTCCCCAAAAAAAA CGGCACC CGAA GGTGCCG CCATGCGCTGTCGGA Pnap_3470 3680185 - 3679661 - | phasin family protein TERM 4384 3680136 - 3680146 + g 74 -5.4 -4.66163 | opp_overlap 3680124, overlap 3680124 AAGCCGGCAAGGGCT TCCA CGC TGGA TTTTTGCGTCGCGAT TERM 4385 3680229 - 3680215 - H 80 -4.2 -5.055 | TTAAGGTTGAAAAAA TGGTGC AGT GCAGCA ATTAAACCATCGCCC TERM 4386 3680408 - 3680394 - H 70 -7.1 -4.208 | TTTCAAAATGACAAA CAGCG AACCA CGCTG CATCCCGGCACCAAC Pnap_3471 3680429 - 3681844 + | phospholipase D/transphosphatidylase TERM 4387 3682044 - 3682023 - f 89 -2.9 -5.54264 | gap 1, overlap 3682024 3682026 AAACACCTAAAAAAA CCAGGCAGGC AAA ACATGCC-GG CCGCCTACATTCCAG Pnap_3472 3682073 - 3683731 + | L-lactate transport TERM 4388 3683821 - 3683797 - T 100 -19.3 -5.24129 | opp_overlap 3683797 TGCCTTGACAAAAAA GCCGCCGTCGA ATT CCGACGGCGGC TTTTTTCATGGCCCG TERM 4389 3683797 - 3683821 + T 100 -18.6 -5.14563 | opp_overlap 3683797 TGCCTTGACAAAAAA GCCGCCGTCG AATTC CGACGGCGGC TTTTTTCATGGCCCG Pnap_3473 3684707 - 3683922 - | enoyl-CoA hydratase TERM 4390 3684031 - 3684051 + g 76 -6.8 -4.45175 | gap 1 CCCTCTTCGGCCATG CGCTCGGCG ACCA TGCCG-GCG TTTCCTTTTTTCATC Pnap_3474 3685947 - 3684748 - | acetyl-CoA acetyltransferase Pnap_3475 3686491 - 3685970 - | hypothetical protein TERM 4391 3686127 - 3686150 + g 91 -9.4 -4.57073 | GTGAGGACGGCCACC GCGCGCATCG CACC CGTGGCGCGC TTTTTAAAGACCATC TERM 4392 3686389 - 3686342 - G 71 -8.3 -3.87815 | gap 1, opp_overlap 3686377, overlap 3686367 3686368 3686371 GCTCATCTGCAGAAA GTCCAGCCCCGCCGTGCCGGTG AAAGG CAC-GGCACGGCGCAGCACCAC GCCTTGATACCAGGT Pnap_3476 3688925 - 3686493 - | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding TERM 4393 3687886 - 3687873 - G 76 -9.5 -4.0371 | CACGGCCCAGAGAAA GCGCG GCTC CGCGC CTTCGGCATGGCGCA Pnap_3477 3690761 - 3688965 - | acyl-CoA dehydrogenase domain-containing protein Pnap_3478 3691530 - 3690787 - | TetR family transcriptional regulator TERM 4394 3691402 - 3691452 + g 91 -9.7 -4.67168 | overlap 3691412 TTCCAGGCCGATGTG GGTGGCCAGGCCGAGCGCCGCC-TC GAC GATGGCGGC-CTTGGTCTGCTGGCC TTTTTGCGGGTTTTT TERM 4395 3691559 - 3691548 - R 74 -4.4 -4.68384 | opp_overlap 3691548 AGTGAGGCAATAAAA GAAC GGTC GTTC TATTTTGCCTCAAAA Pnap_3479 3692680 - 3691760 - | acetylglutamate kinase TERM 4396 3692269 - 3692297 + g 70 -12.3 -3.14132 | overlap 3692286 CGCCGTCGCGCCCGG TCAGGCCGACCGC CTT GCCGCCGGCCTGG TTGATCAGGCCGACG TERM 4397 3692831 - 3692855 + r 71 -4.2 -4.56597 | gap 1, overlap 3692833 3692834 GGCCGCTTACTCCTT TACTCCGCGCG AGCC TGCGCGG-GAA TTTTTGCCGGGCAGG Pnap_3480 3694797 - 3692830 - | polysaccharide biosynthesis protein CapD TERM 4398 3693367 - 3693346 - G 74 -11.6 -3.53224 | CAGCTGCTTGCGAAA CAGCGGCA CCACGC TGCCGCTG CTGCCCAGCACGTTG Pnap_3481 3695489 - 3694929 - | sugar transferase Pnap_3482 3696433 - 3695486 - | NAD-dependent epimerase/dehydratase TERM 4399 3696124 - 3696107 - G 79 -9.1 -4.23674 | gap 1, overlap 3696108 GCTGATGAATACAAA GC-GCCGG ACA CCGGCTGC CGCTGCCTGACGAGC Pnap_3483 3697760 - 3696603 - | glycosyl transferase, group 1 Pnap_3484 3698845 - 3697865 - | NAD-dependent epimerase/dehydratase Pnap_3485 3699796 - 3698864 - | glycosyl transferase family protein TERM 4400 3699575 - 3699564 - G 78 -3 -5.10029 | AGCAAGTTGAAAAAA CTTT TAAT AAAG CCAATGTTATGCGCC Pnap_3486 3701060 - 3699798 - | hypothetical protein TERM 4401 3700164 - 3700153 - G 75 -3 -4.85782 | TTTTCCAAAAACAAA TTCA GCAA TGAA TCCCAGTGGTCAACC Pnap_3487 3702454 - 3701180 - | polysaccharide biosynthesis protein Pnap_3488 3703010 - 3702465 - | dTDP-4-dehydrorhamnose 3,5-epimerase Pnap_3489 3703894 - 3703007 - | glucose-1-phosphate thymidylyltransferase TERM 4402 3703385 - 3703406 + g 71 -5.8 -4.28994 | overlap 3703402 GCCGGTGACGGCATA GCTGCTCT TGGGCT GGAGCGGC TTTTCCTCAATGCTG TERM 4403 3703633 - 3703619 - G 100 -11.4 -4.8622 | opp_overlap 3703619 CTCGCCAATCAAAAA GGCCTG CGC CAGGCC GTCGGGGCTAGGCTG Pnap_3490 3704809 - 3703919 - | dTDP-4-dehydrorhamnose reductase TERM 4404 3704513 - 3704567 + g 73 -12.6 -3.21099 | overlap 3704515 GGTCGAGTAGTGCAC CAGCCAGGCGCCGAGCTTGCTGGC TTCCTGC GCCAGCATGCCGGGCGCCAGGGCG TTGATGGTGCGGACC TERM 4405 3704515 - 3704566 + g 71 -13.6 -2.52516 | gap 1, overlap 3704513 TCGAGTAGTGCACCA G-CCAGGCGCCGAGCTTGCTGGC TTCCTGC GCCAGCATGCCGGGCGCCAGGGC GTTGATGGTGCGGAC Pnap_3491 3705870 - 3704806 - | dTDP-glucose 4,6-dehydratase TERM 4406 3705854 - 3705842 - G 74 -10.5 -3.72576 | TTGGCGCCGATGAAA CCGGC TGC GCCGG TGATGAGAATGGTCA Pnap_3492 3706807 - 3705956 - | lipopolysaccharide biosynthesis TERM 4407 3706444 - 3706481 + g 70 -10 -3.60151 | CAATGGCCTGCGCCT GCTG-TGGCGCATGGCTG GATA CAGTCA-GCGTCAGCAGC TTGTCGTTTCGGCCC TERM 4408 3707014 - 3706969 - H 79 -3.4 -5.18371 | gap 3, overlap 3706970 3706994 CGGCACAAAAGAAAA GCCGGCCACCAGTTGC-GACA TATAACC TGCCTGCAA--GCTGGCCGGC TCATCACGGATTACA TERM 4409 3707421 - 3707410 - g 77 -2.2 -5.00616 | overlap 3707414 GGCGCCGCCAAAAAA GTCA CGGG CGAC AAACGCAATGTGGTC Pnap_3493 3707218 - 3707559 + | histone family protein nucleoid-structuring protein H-NS Pnap_3494 3709601 - 3707607 - | short chain dehydrogenase TERM 4410 3707653 - 3707675 + g 76 -5.6 -4.57073 | overlap 3707652 ATTGCCTGCGCTTCG GGTGAGAG CCTGGCC CTTTCACC TTTTTCGCCCGCCTC TERM 4411 3709395 - 3709407 + g 74 -4.8 -4.59773 | overlap 3709390 3709389 TTTGCTGTCTTCGGC GCTG ACGCC CAGC TTTTTGCGGGTCAGG TERM 4412 3709535 - 3709545 + g 78 -6.8 -4.56597 | CCTTTGCGCCCTTAC GCTG CAG CAGC TTTTTGACCAGGCGC TERM 4413 3709885 - 3709873 - g 85 -3.3 -5.31877 | overlap 3709874 AGCGACGATAAAAAA GCCGC ACC GCAAC TCGCCAGCGCGGTCA TERM 4414 3710391 - 3710373 - g 72 -4.4 -4.56597 | GCGCGCCGCCAAAAA GGTTGCAG GCC CGGCCACC GACACGGCGCAGGGC Pnap_3495 3709834 - 3710418 + | poly(hydroxyalkanoate) granule-associated protein TERM 4415 3710480 - 3710466 - f 100 -11.4 -5.08824 | opp_overlap 3710466 GCGGTATTGAAAAAA GGGACG GCA CGTCCC TTTTTTTGTCGCCCG TERM 4416 3710466 - 3710480 + F 100 -11.4 -5.60993 | opp_overlap 3710466 GCGGTATTGAAAAAA GGGACG GCA CGTCCC TTTTTTTGTCGCCCG TERM 4417 3710631 - 3710615 - g 85 -5.7 -5.03715 | ACCATGGCGAAAAAA GCGCCGC GCC GCACCGC AGAACGTATTCTGGA TERM 4418 3711014 - 3710977 - g 91 -15.5 -3.9461 | gap 1 GGTGCTCAAGAACAA GGCCCGCGCCGTCAGGGC ATT GCTC-GACGGCATGGGCC GGGCCGGCGCCATGA Pnap_3496 3710603 - 3711274 + | TetR family transcriptional regulator TERM 4419 3711538 - 3711556 + G 72 -11.7 -3.33798 | overlap 3711535 3711535 CGGCGCGGGCATCAC GGTGGCC AACAA GGCCACC TGTATTTATGCCAAT TERM 4420 3711681 - 3711661 - g 72 -3.9 -4.62783 | overlap 3711662 GAGCGAGCCGAAAAA CGCCAATGC CTG GTACTGGCA GGCCTATGCCCTCGG TERM 4421 3711742 - 3711728 - g 73 -11.4 -3.5393 | ATCAGCGTGGCCAAA GCCCTG GCG CAGGGC TTGGGCAGCAAGGTC Pnap_3497 3711299 - 3712105 + | hypothetical protein Pnap_3498 3713748 - 3712198 - | glycosyl transferase family protein TERM 4422 3713803 - 3713789 - R 71 -4.2 -4.56597 | GGCCGGCGGCAAAAA CCGTCA GGC CAACGG TGGCGCGCAGCAACG Pnap_3499 3714810 - 3713851 - | hypothetical protein TERM 4423 3714103 - 3714079 - G 81 -7.8 -4.4009 | gap 1 GGCCACGGCATAAAA GCCGGTGGCCG TCGG CAGCC-CCAGC GAAAGGCCCATGTCG TERM 4424 3714446 - 3714426 - G 86 -8.1 -4.56597 | opp_overlap 3714411, overlap 3714427 GCTCGGCGCCAAAAA TCGCCAGGC TTT GCCGGGCGC CCAAAGGCCGGTGCG TERM 4425 3714445 - 3714427 - G 72 -11.6 -3.33744 | opp_overlap 3714411, overlap 3714426 CTCGGCGCCAAAAAT CGCCAGGC TTT GCCGGGCG CCCAAAGGCCGGTGC TERM 4426 3714768 - 3714782 + g 79 -9.2 -4.18018 | TGACGGGCAGCCTGA CGGGTG GCG CGCCCG TTTTGCGTGCGCCGC Pnap_3500 3715718 - 3714807 - | UbiA prenyltransferase TERM 4427 3715826 - 3715877 + G 70 -11.6 -3.15663 | gap 3, opp_overlap 3715813, overlap 3715828 GATTGAGGCGCCTGC TGGCCGCAGGCCTGGCGGCCGCCGG CCTAA CCGGCTGC-GCC-GACCTG-GGCTA TTACTGGCAGTCGGT TERM 4428 3715828 - 3715875 + G 70 -12 -3.14051 | gap 3, opp_overlap 3715813, overlap 3715826 TTGAGGCGCCTGCTG GCCGCAGGCCTGGCGGCCGCCGG CCTAA CCGGCTGC-GCC-GACCTG-GGC TATTACTGGCAGTCG Pnap_3501 3715798 - 3716922 + | putative zinc protease protein Pnap_3502 3719350 - 3716927 - | multi-sensor signal transduction histidine kinase TERM 4429 3717996 - 3718009 + g 82 -3.1 -5.24129 | gap 1, opp_overlap 3717972 3717971, overlap 3717983 CGCGCCAGCGCCAGC GTGCGC TCG GC-CAC TTTTTTCTCCAGCCC Pnap_3503 3719646 - 3719978 + | putative polyhydroxyalkanoic acid system protein TERM 4430 3720669 - 3720690 + G 78 -12.3 -3.75665 | TCACCGGCCGTTCAA GCTGCGCAT GCAG GTGCGCAGC TTTGATGCCGTCTGC Pnap_3504 3719998 - 3720933 + | LysR family transcriptional regulator Pnap_3505 3720967 - 3722202 + | Formyl-CoA transferase Pnap_3506 3722199 - 3723146 + | pyruvate carboxyltransferase Pnap_3507 3723143 - 3723535 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 4431 3724382 - 3724366 - g 72 -7.9 -4.11692 | CAGCGAGTTGCAAAA TCGCCTG TCG CTGGCGA TCAAACAGGTGGTGG TERM 4432 3724437 - 3724417 - g 78 -4.6 -4.6902 | gap 1, overlap 3724429 GGACAACTTCAAAAA GCGCGC-GG AAGA CCAGGGCGC CAAGGCCGTGGTCAT Pnap_3508 3723566 - 3724540 + | hypothetical protein TERM 4433 3724612 - 3724622 + T 72 -4 -4.82901 | TGCGCAAGAAGCCTT TTTG ATT CAAA TTTTTCTCAACCCAA Pnap_3509 3724883 - 3724629 - | acyl-CoA-binding protein TERM 4434 3726338 - 3726327 - g 90 -2.2 -5.40072 | TCTTCTCGAAAAAAA CCAC GGCG GTGA TGACCAATGTGCCGG Pnap_3510 3725024 - 3726592 + | hypothetical protein Pnap_3511 3727431 - 3726664 - | pantothenate kinase TERM 4435 3726942 - 3726899 - G 76 -9.5 -4.07568 | gap 2 GTGTTGGTCGGAAAA TCGCGCACATCGCCGGTCGGC ACAT GCAGGCCGGCG--GTGCCCGA TTCGAGCGCGCGCAG Pnap_3512 3728196 - 3727528 - | regulatory protein, LuxR TERM 4436 3727556 - 3727568 + g 73 -3.3 -4.77567 | opp_overlap 3727543, overlap 3727549 AACCAGCAGGCGCGC TGGAC GGC GGCCA TTTTGTTGTCCACCT TERM 4437 3729366 - 3729386 + G 76 -13.9 -3.18239 | GTCGTGTCGGATGAC GGCCTGGGC ATA GCCCCGGCC TTGCTGCCGTATATC TERM 4438 3729437 - 3729454 + G 76 -5.5 -4.56775 | gap 1, opp_overlap 3729425, overlap 3729433 3729440 CAACCGCAGCACCGG GCACGGGC TGG GCCTG-GC TTTTTGCCAGCAGGT Pnap_3513 3728283 - 3729560 + | integral membrane sensor signal transduction histidine kinase Pnap_3514 3729570 - 3730598 + | response regulator receiver protein Pnap_3515 3731848 - 3730601 - | hypothetical protein TERM 4439 3731113 - 3731078 - G 74 -5.3 -4.62471 | overlap 3731079 CGGAATGGTGAAAAA CCCGGCCCGGCCA GCAAACGCCT TGGCCAGGCTGGC GGTGATGAAGTGCAC Pnap_3516 3732434 - 3731994 - | rhodanese domain-containing protein TERM 4440 3732801 - 3732755 - g 100 -9.3 -5.04082 | gap 1, opp_overlap 3732759 3732785, overlap 3732759 CAAACAACAAGAAAA GCAAGGCCT-GCAGCCTGGACG ATTT CGACCCGGCTGCCAAGCCGTTC TCGACCGGCGACAAG TERM 4441 3732797 - 3732759 - g 83 -13.1 -3.87952 | gap 1, opp_overlap 3732759 3732785, overlap 3732755 CAACAAGAAAAGCAA GGCCT-GCAGCCTGGACG ATTT CGACCCGGCTGCCAAGCC GTTCTCGACCGGCGA TERM 4442 3733076 - 3733060 - g 73 -3.6 -4.7497 | overlap 3733061 3733062 CGCATCCATCAAAAA TTGCCG CCCGC CGGCGA GATCATGATCTTCAA Pnap_3517 3732622 - 3733533 + | hypothetical protein TERM 4443 3733580 - 3733538 - T 89 -9.1 -4.62336 | opp_overlap 3733539, overlap 3733539 AGGTCACCTGAAAAA CCGAAGGCTTGCAGGCGG-GC CAG GCACCGCCGTCCAGCCTT-GG TTTAAAGCATTTTCA Pnap_3518 3734381 - 3733659 - | ABC transporter related Pnap_3519 3736328 - 3734397 - | ABC transporter related TERM 4444 3734461 - 3734473 + g 71 -5.5 -4.37092 | overlap 3734455 TGCACGTCGGCCGGC TTGCC CTC GGCGA TTTTCTGGCCGAAGT Pnap_3520 3737207 - 3736332 - | inner-membrane translocator TERM 4445 3737270 - 3737247 - R 100 -13.8 -5.5604 | opp_overlap 3737263 GCAAGCAATAAAAAA GCACCGCGTC GATT GGCGCGGTGC CCGGGGTTTAACAGT Pnap_3521 3738496 - 3737294 - | extracellular ligand-binding receptor TERM 4446 3738194 - 3738214 + g 78 -3.1 -5.00339 | overlap 3738198 CACGCCGGTATTGAT GTAGCCGAC GGT GGCGGTGAC TTTTTCCTTGTTGAT TERM 4447 3739631 - 3739597 - gH 70 -7.1 -4.19238 | gap 2, overlap 3739617 GCTGCAACTGGAAAA CCGGCTTGAG--GGCCT GAA AGGCCAGCTCCCGCCGG TGCAGATCATCAGCC Pnap_3522 3738758 - 3740191 + | integral membrane sensor signal transduction histidine kinase Pnap_3523 3740157 - 3740831 + | two component LuxR family transcriptional regulator TERM 4448 3740917 - 3740907 - f 91 -4 -5.61881 | opp_overlap 3740907 3740902 CCCGAAAAATAAAAA TTAC GCT GTAA TTTTGTAAATTCCCG TERM 4449 3741011 - 3741024 + F 95 -8.1 -5.00616 | TATCATCACGGCTTG GCACC TCAG GGTGC TTTTTTCCACCCCCC TERM 4450 3741699 - 3741666 - g 80 -5.8 -4.72272 | overlap 3741668 3741670 GGCTGCTACGAAAAA GATACCGGTGCTGG GCATTA CCGGCACCGGCGGC GCGGGCAAGTCGTCG TERM 4451 3741695 - 3741670 - g 75 -11.8 -3.57901 | overlap 3741668 3741666 GCTACGAAAAAGATA CCGGTGCTGG GCATTA CCGGCACCGG CGGCGCGGGCAAGTC TERM 4452 3741943 - 3741963 + G 76 -8.1 -4.11623 | overlap 3741950 3741951 CTGCCCGACGTGATT GCCGCCTGC AAG GCCGCCGGC TTTGATTTGATCATC TERM 4453 3742620 - 3742600 - g 78 -3.2 -5.00616 | gap 1 CCGTCGGCCAAAAAA CTGCTGGCC CAGT GGCCCG-AG ATGCAAAAAGCCTAT TERM 4454 3743197 - 3743172 - g 76 -8.9 -4.1585 | overlap 3743163 3743187 CCAGAACCTGGAAAA GTTCAAGGCCG AGAA CGGCCGGGAAC CCACCGACACCGAAA Pnap_3524 3741055 - 3744348 + | methylmalonyl-CoA mutase, large subunit TERM 4455 3744424 - 3744385 - T 100 -23.1 -5.00616 | gap 1, opp_overlap 3744385 TCCGGGCGCAAAAAA CCCGGAC-AACCGAAGCG GATCG CGCTTCGGTTGGTCCGGG TTTCTTTTTGGGCGG TERM 4456 3744385 - 3744424 + T 100 -23.1 -4.85782 | gap 1, opp_overlap 3744385 TCCGGGCGCAAAAAA CCCGGAC-AACCGAAGCG GATCG CGCTTCGGTTGGTCCGGG TTTCTTTTTGGGCGG TERM 4457 3744473 - 3744496 + T 80 -4.4 -5.1356 | overlap 3744453 CAATCCGTGGCTTAA CCCTGGTGGG GGCG CTTGCCTGGG TTTTTCTTGCTGCGG Pnap_3525 3744630 - 3744469 - | hypothetical protein Pnap_3526 3745837 - 3744722 - | hypothetical protein TERM 4458 3746268 - 3746249 - g 70 -7.8 -4.10161 | gap 1, opp_overlap 3746258 3746259, overlap 3746260 CATCACCTTTGAAAA GCCGGCGCA AAC CGCGC-GGC GCGGCATTGTCAGGT TERM 4459 3746272 - 3746260 - g 70 -10.5 -3.55203 | opp_overlap 3746259 3746258, overlap 3746249 AAAAGCCGGCGCAAA CCGCG CGG CGCGG CATTGTCAGGTCGTT Pnap_3527 3746028 - 3746801 + | ABC transporter related Pnap_3528 3746804 - 3747508 + | ABC transporter related Pnap_3529 3747586 - 3748779 + | extracellular ligand-binding receptor TERM 4460 3748797 - 3748824 + F 100 -9.8 -5.94597 | TGACAGCACCCGAAG GCGGCTGGTTGC ACAA GTGACTGGCCGC TTTTTTTTAATATTC Pnap_3530 3748864 - 3749748 + | inner-membrane translocator TERM 4461 3749878 - 3749896 + G 73 -8.1 -3.96624 | GCTGGTCGCGCCGGT CATCGGG CTGTA CCCGGTG TTTGTCATGAAGCTG TERM 4462 3750103 - 3750131 + G 82 -10.9 -4.07246 | GATCGGCCTGGTGGT TGGCCTGGTGGCG ATT CGCCGGCAGGGCA TTTACTTTGCCATGA Pnap_3531 3749753 - 3750775 + | inner-membrane translocator TERM 4463 3750831 - 3750805 - f 100 -13.1 -4.56775 | gap 1, opp_overlap 3750805 3750823 AGCGGCCCGGAAAAA GTGCGC-GCAAC ACAG GTTGCAGCGCAC TTTTTTTATTGCGCT TERM 4464 3750805 - 3750831 + F 100 -13.1 -5.80364 | gap 1, opp_overlap 3750805, overlap 3750823 AGCGGCCCGGAAAAA GTGCGC-GCAAC ACAG GTTGCAGCGCAC TTTTTTTATTGCGCT TERM 4465 3752160 - 3752150 - g 73 -8.2 -3.965 | opp_overlap 3752152, overlap 3752143 CTCGAAAACCAAGAA CGCC GCC GGCG TCGAGGTGGCCGATG Pnap_3532 3751272 - 3752324 + | porin TERM 4466 3752385 - 3752345 - T 95 -17.8 -2.71681 | gap 1, opp_overlap 3752349 3752356, overlap 3752349 3752350 3752356 GAACTGCGGCAAGCA CCAAC-CAAAAAGGGCGCC TTCG GGCGCCCTTTTTGCGTCAG TTCATGGAACGAGTC TERM 4467 3752349 - 3752381 + T 90 -17.2 -2.56596 | gap 1, opp_overlap 3752345 3752349 3752350 3752356, overlap 3752356 TGCGGCAAGCACCAA C-CAAAAAGGGCGCC TTCG GGCGCCCTTTTTGCG TCAGTTCATGGAACG TERM 4468 3752380 - 3752349 - T 100 -17.4 -3.27298 | opp_overlap 3752349 3752356, overlap 3752345 3752350 3752356 TGCGGCAAGCACCAA CCAAAAAGGGCGCC TTCG GGCGCCCTTTTTGC GTCAGTTCATGGAAC TERM 4469 3752379 - 3752350 - T 100 -20.9 -2.56164 | opp_overlap 3752349 3752356, overlap 3752349 3752345 3752356 GCGGCAAGCACCAAC CAAAAAGGGCGCC TTCG GGCGCCCTTTTTG CGTCAGTTCATGGAA TERM 4470 3752356 - 3752373 + T 100 -14.1 -4.68424 | opp_overlap 3752350 3752349 3752345 3752356, overlap 3752349 AGCACCAACCAAAAA GGGCGCC TTCG GGCGCCC TTTTTGCGTCAGTTC TERM 4471 3752373 - 3752356 - T 100 -14.1 -4.90869 | opp_overlap 3752356 3752349, overlap 3752350 3752349 3752345 AGCACCAACCAAAAA GGGCGCC TTCG GGCGCCC TTTTTGCGTCAGTTC TERM 4472 3752463 - 3752430 - T 95 -15.2 -3.75153 | overlap 3752431 3752447 TCGCCGCAAGTTAAA GCGCCGCGCTGCAG ACAGTG CTGCGGCGCGGCGA CGGCCCATGGCGTCG TERM 4473 3752462 - 3752431 - T 100 -18.7 -2.84878 | overlap 3752430 3752447 CGCCGCAAGTTAAAG CGCCGCGCTGCAG ACAGTG CTGCGGCGCGGCG ACGGCCCATGGCGTC Pnap_3533 3753269 - 3752502 - | ABC transporter related Pnap_3534 3754169 - 3753282 - | ABC transporter related Pnap_3535 3755083 - 3754181 - | binding-protein-dependent transport systems inner membrane component Pnap_3536 3756147 - 3755080 - | binding-protein-dependent transport systems inner membrane component TERM 4474 3755598 - 3755545 - G 100 -9.2 -4.946 | overlap 3755536 3755547 ATCAAACAGCAAAAA GCCGCTGGCCGGGGGCACCATGCC GTCAAA GGCCAGGTCCACCCGCCCGGCGCC GCCGGCCCAGCCCAG TERM 4475 3756183 - 3756171 - R 70 -3.3 -4.82901 | opp_overlap 3756181 CCGTGGTCAGAAAAA GGGCT GGC AGCGC AGGCTCAGCGTTGCT Pnap_3537 3757858 - 3756188 - | extracellular solute-binding protein TERM 4476 3756295 - 3756326 + g 72 -8 -4.20696 | gap 1, overlap 3756286 CCATTTGCGAGATCG GCTGAATGGC-GCCG ACC TGGCTGTCATACAGC TTTTGCGCTTCCTGG TERM 4477 3757517 - 3757571 + g 84 -15.1 -3.32807 | overlap 3757564 3757565 GCGCACGCTCAGGGT GATGCTGCGCCCGTCCGG-CGAGATCT TCC AGCTCTCGGCCAGGCCGG-GCAGCATC TTGCTGGTGTTTTGC Pnap_3538 3759045 - 3757843 - | mandelate racemase/muconate lactonizing protein Pnap_3539 3759311 - 3760093 + | regulatory protein GntR, HTH TERM 4478 3760079 - 3760125 + T 77 -3.7 -4.98857 | opp_overlap 3760094 CGGCGGGTTATTCAG GCGGC-CGGAAATTGAGGGGG AATATCG CCCGTTCCGTT-CCGAGCCGC TTTTTCTGATTCCAT Pnap_3540 3760844 - 3760209 - | hypothetical protein Pnap_3541 3762127 - 3760847 - | ATPase-like protein Pnap_3542 3763608 - 3762205 - | ATP-dependent RNA helicase DbpA TERM 4479 3762359 - 3762398 + g 100 -7.6 -5.26875 | gap 1, overlap 3762360 3762373 TCGCGGGTGAAGCCG GCCTCGCCGGTCAGCGCGC CGA GCACGTCG-CCGGCGCGGA TTTTTTCCTTACGGC TERM 4480 3762360 - 3762397 + g 76 -11.1 -3.75402 | gap 1, overlap 3762359 3762373 CGCGGGTGAAGCCGG CCTCGCCGGTCAGCGCGC CGA GCACGTCG-CCGGCGCGG ATTTTTTCCTTACGG Pnap_3543 3763736 - 3764557 + | phosphoesterase, PA-phosphatase related TERM 4481 3765894 - 3765923 + G 83 -7.7 -4.56597 | opp_overlap 3765877 TCCAGGGCTTTGCCG TGGCCATGAAGGC CGGC GCCACCAAGGCCA TTTTTGACAGCACGA Pnap_3544 3764633 - 3766000 + | pyridine nucleotide-disulphide oxidoreductase dimerisation region TERM 4482 3766969 - 3766945 - g 78 -14.3 -3.04792 | CCACCATGGTCAACA TCGGCGTCGGC CCG GCCAACGCCAA GAACATCACCGACCA Pnap_3545 3766053 - 3767573 + | AMP nucleosidase TERM 4483 3767688 - 3767711 + F 100 -8.8 -4.99947 | overlap 3767690 3767692 TGGGTTGGGCTGGCC GGGGGTTGCC CGGC GGCAACTCAC TTTTCTTTGCTTCGC TERM 4484 3767771 - 3767750 - f 74 -4.4 -4.7261 | gap 1, overlap 3767751 AGTGAGCAAAAGAAA GGCGACCCG CAGTC CGAGTC-CC TGCGCTTCGCTTCGG TERM 4485 3767821 - 3767810 - f 74 -7.2 -4.09685 | overlap 3767811 CGCTACGCCGCAAAA GCGG GGGT CCGC GCAAACTCGCTGCGC TERM 4486 3767974 - 3767938 - f 100 -15.9 -4.18494 | opp_overlap 3767939 3767940 3767971, overlap 3767939 GATTCGGAGCCAAAA GTGCTTCTTGCGCAAGC ACA GCCTGCGCAAGAAGCTA TTGAATTAGTAGCAT TERM 4487 3767939 - 3767974 + F 100 -15.6 -3.20901 | gap 1, opp_overlap 3767938 3767939, overlap 3767940 3767971 ATTCGGAGCCAAAAG T-GCTTCTTGCGCAAGC ACA GCCTGCGCAAGAAGCTA TTGAATTAGTAGCAT TERM 4488 3767973 - 3767939 - f 100 -19.4 -3.10775 | opp_overlap 3767939 3767940 3767971, overlap 3767938 ATTCGGAGCCAAAAG TGCTTCTTGCGCAAGC ACA GCCTGCGCAAGAAGCT ATTGAATTAGTAGCA TERM 4489 3767940 - 3767972 + F 100 -20.7 -3.16676 | opp_overlap 3767939 3767938, overlap 3767939 3767971 TTCGGAGCCAAAAGT GCTTCTTGCGCAAGC ACA GCCTGCGCAAGAAGC TATTGAATTAGTAGC TERM 4490 3768184 - 3768206 + F 80 -5.5 -4.9448 | gap 1, opp_overlap 3768184, overlap 3768184 3768201 CCGTAGCGAAGCGAA GG-GACCCAG ACAG CCGGGTCGCC TTTTCTTTGGTGACT TERM 4491 3769523 - 3769483 - g 93 -19.7 -3.02511 | opp_overlap 3769497, overlap 3769445 CTGACGCTGGGAACA CTGACCAGCGGCGCGTCGG TCG CCAATGCGCTGCTGGCCAG CGTGTCGGTGCCACT Pnap_3547 3768484 - 3769917 + | RND efflux system outer membrane lipoprotein TERM 4492 3770333 - 3770319 - g 71 -5.6 -4.25056 | GACCGCATCAAGAAA GGCCAG GTG CTGGTC GAGCTGGACACGGCC Pnap_3548 3769971 - 3771299 + | RND family efflux transporter MFP subunit TERM 4493 3771546 - 3771565 + G 86 -7.8 -4.72486 | gap 1 TCTCGCGCGACCAGC GCGCC-CTG CTG CGGCGGCGC TTTTTCGGCTTTGTG TERM 4494 3771943 - 3771955 + G 74 -9.1 -3.92373 | overlap 3771931 GGCCGCCTATGCGCG GCGCA TCG TGCGC TTTGTCGATGGCCTG Pnap_3549 3771296 - 3772063 + | ABC transporter related TERM 4495 3772613 - 3772640 + G 71 -11.2 -3.53012 | CGTGCGAAGTGATCG GCGTGCTGGCCT CCAA GGGCCAGGGCGC TTTCGGCAACGACCA Pnap_3550 3772063 - 3773271 + | hypothetical protein TERM 4496 3773373 - 3773348 - T 71 -4.6 -4.66609 | overlap 3773349 GATTTCATGCAAAAA CCCCTGCCCT TCACTC AGTGCAGGGC CATCGACGACTCGGC Pnap_3551 3773556 - 3773362 - | hypothetical protein Pnap_3552 3774246 - 3773602 - | hemolysin III family channel protein TERM 4497 3774136 - 3774110 - G 70 -7.2 -4.08945 | overlap 3774097 3774111 ATGACGCCGGCAAAA CTCGCCGCGC TCCGGTT GCGCGCCGAA GCCATCAAAAACGGC TERM 4498 3774160 - 3774148 - G 81 -6.9 -4.77157 | opp_overlap 3774155 3774156, overlap 3774150 CGAAGCCATCAAAAA CGGCA CCG CGCCG ACAGCGGCCAGCAGT TERM 4499 3774155 - 3774203 + g 74 -10.2 -3.74693 | gap 1, opp_overlap 3774148 3774150, overlap 3774156 ATCAAAAACGGCACC GCGCCGACAGCGGCCAGCAGTGC GACA GCGTGGCT-GACGCTGTTGGCGA TTTCCTCGCCTGAGC TERM 4500 3774156 - 3774202 + g 74 -13.7 -2.84602 | gap 1, opp_overlap 3774148 3774150, overlap 3774155 TCAAAAACGGCACCG CGCCGACAGCGGCCAGCAGTGC GACA GCGTGGCT-GACGCTGTTGGCG ATTTCCTCGCCTGAG Pnap_3553 3774351 - 3774656 + | hypothetical protein TERM 4501 3774902 - 3774866 - g 78 -2.8 -5.02476 | gap 1, opp_overlap 3774885 3774893, overlap 3774868 ACACCGGTTAAAAAA CAGCCG-TGACACGCGC AAGG GCGCCAGGCAGCGCCTG AATTCAGAGCGAATG Pnap_3554 3774687 - 3774983 + | hypothetical protein Pnap_3555 3775123 - 3775515 + | hypothetical protein TERM 4502 3776638 - 3776620 - g 71 -8.8 -3.93288 | overlap 3776623 GCGCAGTTAAGCAAA CAAGCGCG GGC CGCACTCG AGGCCATGGGGGTGC TERM 4503 3777219 - 3777232 + G 79 -8.1 -4.25681 | opp_overlap 3777219 GGCCATCACAGAGGA GGGCT TGAA AGCCC TTTGTTCACTTCAAT Pnap_3556 3775783 - 3777276 + | transposase, IS4 family protein Pnap_3557 3778959 - 3777739 - | 6-phosphofructokinase TERM 4504 3777970 - 3777946 - G 80 -5.7 -4.68384 | gap 1, overlap 3777936 ATCGACCGAATAAAA CCCGGTGCGC TTGATG GCG-ACCGAG CCGTCCTGCGTGCCC TERM 4505 3778578 - 3778590 + g 74 -4.7 -4.59773 | TGTGGATGCTGCGCA GCGGG TAG CCAGC TTTTTGCGCCTCCAG Pnap_3558 3780447 - 3779080 - | filamentation induced by cAMP protein Fic Pnap_3559 3781673 - 3780600 - | TRAP-type uncharacterized transport system protein, periplasmic component Pnap_3560 3782457 - 3781675 - | zinc finger, RanBP2-type TERM 4506 3782032 - 3781987 - G 74 -10.4 -3.72324 | gap 3, opp_overlap 3782021 CAGTGCGAGCAATAA GGCCGCG-CCCAG--CATGAGCC ACC GGCGCCTGGACCGGGTCGCGGCC GCAGCGGCTTCGGCT TERM 4507 3782021 - 3782054 + g 71 -9.5 -3.73224 | gap 1, opp_overlap 3781987 CACCGGCGCCTGGAC CGGGTCGCGGCCGCAG CGG CTTCGGCTGA-ACCCG TTTGATCCGGCGTGC TERM 4508 3782134 - 3782122 - G 80 -4.8 -4.83615 | CATTTCGGATAAAAA CGTG TCATC CACG GCTTGCGTCCCGGGC TERM 4509 3782213 - 3782232 + g 73 -11.4 -3.56643 | overlap 3782180 CCGGCCGCATCGTCC GGTGCGGC AGGG GCCGCATC TTTGACGGGTGTCGC TERM 4510 3782576 - 3782545 - H 77 -3.6 -5.00616 | overlap 3782546 3782548 3782549 CGGGCGCTCAAAAAA TCAGCGGCACAGGG TTGT CCCCATGCCAGCAA CTCCGGCAGCATGGT TERM 4511 3783021 - 3783007 - g 76 -5.6 -4.5852 | opp_overlap 3783016 CAATGGAAAGCAAAA GGCAAG GAT CTGGCC GCAAACGCCAGGGGC Pnap_3561 3782983 - 3783696 + | hypothetical protein Pnap_3562 3783720 - 3784322 + | D-alanyl-D-alanine dipeptidase TERM 4512 3784338 - 3784374 + F 100 -15.2 -4.80959 | opp_overlap 3784340, overlap 3784340 3784340 ATGCTCTGTTTTTAA TAGCTGCTGGCGCATG ACGAG CATGCGCCAGCGCCTG TTTTCTTATAAATTC TERM 4513 3784371 - 3784340 - f 100 -16.7 -3.01712 | gap 1, opp_overlap 3784338 3784340 3784340 GCTCTGTTTTTAATA GCTGCTGGCGCATG ACGAG CATGCGCCAGC-GC CTGTTTTCTTATAAA TERM 4514 3784340 - 3784371 + F 93 -16.7 -2.99584 | gap 1, opp_overlap 3784340, overlap 3784340 3784338 GCTCTGTTTTTAATA GCTGCTGGCGCATG ACGAG CATGCGCCAGC-GC CTGTTTTCTTATAAA TERM 4515 3784340 - 3784372 + F 100 -15.6 -4.01115 | opp_overlap 3784340, overlap 3784338 3784340 GCTCTGTTTTTAATA GCTGCTGGCGCATG ACGAG CATGCGCCAGCGCC TGTTTTCTTATAAAT Pnap_3563 3784446 - 3785048 + | hypothetical protein Pnap_3564 3785185 - 3785418 + | hypothetical protein TERM 4516 3785989 - 3785950 - g 74 -13.4 -2.87463 | gap 1 AAGCTGCCCGACACA GCGGC-CAGCGTGGGGGCC GGC GGCCGCAGCGCCGGGCCGC CCCAAGCAAGGCCAG TERM 4517 3786653 - 3786622 - g 74 -5.1 -4.66609 | gap 1 GACCCGATGGAAAAA GCCATCCAGCGCTT CGGCC ACG-GCTGGCTGGC CGGCACCGAGCATGT TERM 4518 3787255 - 3787233 - g 82 -14.8 -3.29144 | GCAGCCGGCGCACAA GCTGCGCCTG GTG CAGGCGCTGC GGGCCGGCGGCGAGG Pnap_3565 3785458 - 3788070 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC Pnap_3566 3788204 - 3789949 + | poly-beta-hydroxybutyrate polymerase domain-containing protein TERM 4519 3790099 - 3790067 - gf 95 -12.7 -4.15044 | overlap 3790068 3790093 3790098 CTGGCCGGCAAGAAA GGCCTGATCGTCGGC ATT GCCAACGACCAGAGC ATCGCCTACGGCTGC TERM 4520 3790099 - 3790068 - gf 84 -13.8 -3.08812 | gap 1, overlap 3790067 3790093 3790098 TGGCCGGCAAGAAAG GC-CTGATCGTCGGC ATT GCCAACGACCAGAGC ATCGCCTACGGCTGC TERM 4521 3790502 - 3790492 - gf 70 -6.8 -4.08216 | CTACGGCGCGCAAAA GGTC ATC GACC ACTACGGCATCATGG Pnap_3567 3790004 - 3790807 + | short-chain dehydrogenase/reductase SDR TERM 4522 3791288 - 3791310 + GF 86 -10.5 -4.07568 | CCAGGCCCATGTGAT TGCGCCGGC CGACA GCCTGCGCA TTTTGCGCACCGACC TERM 4523 3791959 - 3791944 - gf 76 -6.1 -4.56597 | overlap 3791945 CCGCGCTGTCAAAAA TGGCC GACCGG GGCCA GATCACCGGCGGCCT TERM 4524 3791973 - 3791945 - gf 70 -9.5 -3.33744 | gap 1, opp_overlap 3791964, overlap 3791944 3791965 CGCGCTGTCAAAAAT GGCCGACCGGGG CCAGAT CACCGG-CGGCC TGGTCGATGGCCCGC Pnap_3568 3790776 - 3792278 + | bifunctional enoyl-CoA hydratase/phosphate acetyltransferase Pnap_3569 3792275 - 3793510 + | acetate kinase Pnap_3570 3794739 - 3793633 - | MscS mechanosensitive ion channel TERM 4525 3793921 - 3793878 - G 71 -13.1 -3.06183 | CCCACTCGGAGGCAA GCTCGCAGGCG-CGCTGGGCA GCTT CGCGCAGCGGCGCCAGCG-GC ATGCGGTAGTCCACC TERM 4526 3794217 - 3794172 - G 90 -13.9 -4.08216 | gap 1 TCAGGTTGCTGAAAA TCGGCC-GCGCGGCAATGCCGG CCA CCAGCCCGACCACGCCGGCCGA CGCCAGCAGGCTGGC purT 3795953 - 3794748 - | phosphoribosylglycinamide formyltransferase 2 TERM 4527 3795700 - 3795729 + g 71 -4.9 -4.43681 | gap 1, overlap 3795702 3795725 ATGCCGGTGGCAATC GCCTCGATCTCGGG CAC CACCAGGTCG-GGC TTTTCCTGTTCAATC TERM 4528 3796002 - 3795982 - H 89 -3.2 -5.54264 | opp_overlap 3796000, overlap 3795998 AAAGAGTGAAAAAAA CCGGCC CCGGTCAAC AGCCGG ACGCGCCGGCTTGCG Pnap_3572 3796152 - 3796742 + | hypothetical protein Pnap_3573 3796823 - 3797764 + | ABC transporter related Pnap_3574 3797761 - 3798615 + | ABC transporter Pnap_3575 3798759 - 3799784 + | CheB methylesterase Pnap_3576 3800501 - 3799830 - | hypothetical protein TERM 4529 3800192 - 3800202 + g 73 -8.2 -4.07568 | TGGTGGCCACGACCA CGCC CCT GGCG TTTTGCCACGGGCCG TERM 4530 3800375 - 3800334 - G 88 -17.1 -3.01924 | CAGTGTCTGGCAATA GGCATCGGCGCCGGCCAGG CCGC CCAGGTCGGCGCCCTTGCC CGGGTTGGCGCTGGT TERM 4531 3800410 - 3800400 - G 72 -2.4 -4.72272 | GCTGGTCACGAAAAA GCTC ATC GGGC TCATGGGATGCGGCG TERM 4532 3800758 - 3800723 - H 91 -14.9 -3.05294 | gap 1, opp_overlap 3800725, overlap 3800706 TCAAATGCTTCAATA GC-CTTTGAGCAGCGT GGACA ACGCTGCCCAAAGTGC TTCAGCGAAAGAGAG TERM 4533 3800725 - 3800755 + H 83 -14.1 -2.70932 | opp_overlap 3800706 3800723 AAATGCTTCAATAGC CTTTGAGCAGCGT GGACA ACGCTGCCCAAAG TGCTTCAGCGAAAGA Pnap_3577 3800883 - 3802121 + | extracellular ligand-binding receptor TERM 4534 3802242 - 3802269 + T 100 -20.6 -2.78384 | opp_overlap 3802242 AGCACACTCAAAAAA GCCCCGCCGGTC ACCT GACTGGCGGGGC TGTGCTGCCGCAAAA TERM 4535 3802269 - 3802242 - T 100 -18.4 -5.13473 | opp_overlap 3802242 AGCACACTCAAAAAA GCCCCGCCGGTC ACCT GACTGGCGGGGC TGTGCTGCCGCAAAA TERM 4536 3802301 - 3802285 - T 86 -10.8 -4.07568 | opp_overlap 3802299 TGTGCTGCCGCAAAA CGCCGG GCTTG CCGGCG CGAAGGCGCTTATTG Pnap_3578 3802889 - 3802311 - | YceI family protein Pnap_3579 3803523 - 3802933 - | YceI family protein TERM 4537 3803609 - 3803558 - R 78 -6.5 -4.63863 | gap 2, overlap 3803562 TGAAGAGAAAAAGAA GTGA-GGCAGGCT-CAGCGCAGGCC TGGC AGCATGCGCTGGAGCAGGCCGTCGC GGTCCACCCAGTGGT Pnap_3580 3804087 - 3803569 - | cytochrome B561 TERM 4538 3804187 - 3804158 - R 72 -3.7 -4.6856 | gap 1, overlap 3804159 3804160 GAAACAGGTTAAAAA CTTTCGTAAAACAT TGA AAGTTCTACGAA-G TATAGAAACCGTTTG Pnap_3581 3805244 - 3804273 - | hypothetical protein TERM 4539 3804380 - 3804435 + g 74 -10.5 -3.73088 | gap 3, overlap 3804368 3804384 3804412 GCAGCCGCGTCTGTG CGGCGCGGGTCTTGG-CGG-CGTTCGGC GTG GCCGGACGGCTGGCCAGGATCAGC-TCG TTCTTCATCGAATGT TERM 4540 3804384 - 3804432 + g 70 -13.2 -2.96249 | gap 2, overlap 3804368 3804380 3804412 CCGCGTCTGTGCGGC GCGGGTCTTGG-CGG-CGTTCGGC GTG GCCGGACGGCTGGCCAGGATCAGC TCGTTCTTCATCGAA TERM 4541 3804821 - 3804839 + g 83 -7.3 -4.57073 | opp_overlap 3804813 3804814, overlap 3804822 TGGCAAAGCCCAGCC GCGCGGC GAGCA GCCGCGA TTTTTCGACCAGCTC Pnap_3582 3805325 - 3806374 + | serine/threonine protein kinase TERM 4542 3806861 - 3806837 - g 77 -12.7 -3.59262 | opp_overlap 3806840 GGCGAGACCTGGAAA GCGCTGGCGGG CGA CGCGCCTGCGC CGGTGCTGTCCGAAT TERM 4543 3807106 - 3807091 - g 72 -11.8 -3.36878 | CCCAGGTAGCGACAA GGCCCC GGCC GGGGCC GCGTCCATCCGCATC Pnap_3583 3806480 - 3807514 + | ErfK/YbiS/YcfS/YnhG family protein Pnap_3584 3807558 - 3808082 + | peptidase M23B Pnap_3585 3808673 - 3808113 - | hypothetical protein TERM 4544 3808197 - 3808170 - G 79 -8.3 -4.36914 | overlap 3808172 CTCGCGCGGATAAAA GCCGACGCCGC CCGCGC GCAGCGACAGC GCCGCCTGGTGCAGG Pnap_3586 3810247 - 3808670 - | peptidoglycan binding domain-containing protein TERM 4545 3810348 - 3810324 - R 100 -13.5 -5.18355 | opp_overlap 3810323 3810324 CCCAAAAAGGAAAAA TCCCGGCAGGC AGA GCCCGGCGGGA CTTTCGGCAACCGGC Pnap_3587 3812276 - 3810387 - | heat shock protein 90 TERM 4546 3813201 - 3813179 - g 76 -5.5 -4.57341 | AACCGTTGCCAAAAA TGGCCGCGT GACCT ACACCGCCA CCCAACTCTGAGCCA Pnap_3588 3812565 - 3813212 + | hypothetical protein TERM 4547 3813263 - 3813289 + F 70 -6.5 -4.10781 | opp_overlap 3813262 3813270, overlap 3813264 3813266 GCGAATTTTGAACAG CGACCAAGCCC GAACA GGCCTTGGTCA TTTGTCTGAATTATT TERM 4548 3813294 - 3813334 + F 76 -2.7 -5.01732 | opp_overlap 3813303, overlap 3813296 3813297 GGCCTTGGTCATTTG TCTGAATTATTAAAAATCG ACG CGATATTTGATAAATTCGA TTTTTTAACAAAATT TERM 4549 3813419 - 3813409 - g 72 -2.6 -4.72272 | opp_overlap 3813409 GTTGGCTATGAAAAA TTTT GTA AAAA TTGTTTTGGTTTCTA Pnap_3589 3813401 - 3814063 + | hypothetical protein Pnap_3590 3814083 - 3814730 + | hypothetical protein TERM 4550 3814955 - 3814983 + G 70 -10.2 -3.65351 | opp_overlap 3814973 GCTGCGCCTGAACCT GGCGCGCTGGCT CAACC AGCCGGTGCGGC TTTACATGGCGCTGG TERM 4551 3815024 - 3815082 + G 80 -14.6 -3.17725 | gap 3, opp_overlap 3815043, overlap 3815054 3815063 3815075 CGGCGAGCCCATTTA CGCGACCTGGCGCA-CGCAAGGCCGCCTG ATGC CCGGC-GCCTTGCGCTCCGGCGGG-CGCG TGCTTGTTTTTGAAG Pnap_3591 3814731 - 3815213 + | hypothetical protein Pnap_3592 3815210 - 3816037 + | hypothetical protein TERM 4552 3816544 - 3816559 + G 82 -6 -4.82901 | opp_overlap 3816522 3816524, overlap 3816524 3816546 AGCACCTCGCTGGCG CGCGGC ATTG GCCGGG TTTTTCTGCCCACCA TERM 4553 3817799 - 3817777 - g 86 -16.2 -3.18264 | opp_overlap 3817793 3817797 CTGCTGAGCTACGAA GGCCGCGCCG GTT CGGCGCGGGC GCCGCTGGGCGGCCT Pnap_3593 3816034 - 3818121 + | hypothetical protein Pnap_3594 3819534 - 3818185 - | PGAP1 family protein TERM 4554 3819376 - 3819364 - G 83 -4.7 -5.00616 | TGCCGGGCCAAAAAA GGAGG CGA CCGCC CTGTACACCTGGCCG TERM 4555 3819606 - 3819642 + r 71 -5.7 -4.27316 | opp_overlap 3819608, overlap 3819593 3819608 TTGCTATTGATTACA TAGCTGCTTGCGCACAC CCT GCTTGCGCAAACTGCTG TTTTGGCTTGAAAAG Pnap_3595 3820508 - 3819672 - | pseudouridine synthase Pnap_3596 3820620 - 3821177 + | putative transmembrane protein Pnap_3597 3821846 - 3821202 - | two component LuxR family transcriptional regulator Pnap_3598 3823162 - 3821843 - | integral membrane sensor signal transduction histidine kinase TERM 4556 3823587 - 3823554 - g 95 -18.1 -3.53012 | overlap 3823535 3823575 CCGCGCCGGTGCAAA GCGCCACCAGCCGCG ACAT CACGGCCAGCGGCGC GCTCGAACTCGGCGA TERM 4557 3824062 - 3824023 - g 76 -7.1 -4.4078 | gap 1, opp_overlap 3824025, overlap 3824025 CGTGTTCAAGGAAAA CGGCTGGCGCGACGAC TCGCCGTCC GACGT-GCGCCAGCTG TTCGGCAAGCTCGGC TERM 4558 3825215 - 3825190 - g 73 -8.3 -4.07568 | gap 1 GTTCCGCGCTGAAAA CCGCGACG-ACA TCC TGTTCGTCGCCG ACAACCAGTCGGGCT Pnap_3599 3823415 - 3825883 + | TonB-dependent receptor TERM 4559 3825922 - 3825954 + T 100 -5.4 -5.64006 | ACTCCTGAATTCATA GCTGCCAGCGCATG CTGGA CGTGCGCAAGTGGC TTTTTTTGATTGAAT Pnap_3600 3826694 - 3825987 - | two component transcriptional regulator Pnap_3601 3829403 - 3826704 - | osmosensitive K+ channel signal transduction histidine kinase TERM 4560 3827004 - 3826992 - G 70 -10.5 -3.61178 | opp_overlap 3826992 3827000 CGCATGGATTTCAAA CGGCG GCG CGCCG TACTTGGCGGCGTTT TERM 4561 3827000 - 3827016 + g 70 -7.2 -4.08692 | opp_overlap 3826992, overlap 3826992 TTTCAAACGGCGGCG CGCCGT ACTTG GCGGCG TTTTCCAGCAGGTTG TERM 4562 3828163 - 3828113 - G 84 -16.8 -3.04144 | overlap 3828087 3828115 TGGCCAGGTCGAACA CATTGAGCAGCGGCGTGGCCAGCA GCG TGATGGCCACGCTGCTGGCCACCG CCCAGGCATAGCGCG TERM 4563 3828161 - 3828115 - G 81 -15.8 -3.07895 | overlap 3828087 3828113 GCCAGGTCGAACACA TTGAGCAGCGGCGTGGCCAGCA GCG TGATGGCCACGCTGCTGGCCAC CGCCCAGGCATAGCG TERM 4564 3828423 - 3828468 + g 73 -12.5 -3.14132 | gap 1 CTCGGCGGCCGCATC GCTGGC-GGCCAGCACGGCG GTAGTCG CGCCCAGCTCGCCGGCCAGC TTGATGACGGCCAGA TERM 4565 3829340 - 3829308 - G 77 -13.4 -3.34398 | opp_overlap 3829311, overlap 3829306 3829311 GCTGGCGCCGAAATA GATGCGCAGCCTGC CGCGC GCACGCTGCGCTTC CTGCTGCTGCAGCCG TERM 4566 3829311 - 3829337 + g 76 -13.7 -3.23216 | opp_overlap 3829308 3829306 3829311 GGCGCCGAAATAGAT GCGCAGCCTGC CGCGC GCACGCTGCGC TTCCTGCTGCTGCAG TERM 4567 3829337 - 3829311 - G 71 -13.7 -2.54325 | opp_overlap 3829311, overlap 3829308 3829306 GGCGCCGAAATAGAT GCGCAGCCTGC CGCGC GCACGCTGCGC TTCCTGCTGCTGCAG Pnap_3602 3830012 - 3829422 - | potassium-transporting ATPase, C subunit Pnap_3603 3832110 - 3830032 - | K+-transporting ATPase, B subunit TERM 4568 3830142 - 3830158 + g 78 -15.1 -2.71681 | opp_overlap 3830118 3830123 GCCGCAGCAGCGCGG CCGCGCC CAC GGCGCGG TACTTCACGCCCTTG Pnap_3604 3833929 - 3832130 - | potassium-transporting ATPase, A subunit TERM 4569 3833261 - 3833277 + g 72 -7.2 -4.15833 | CGCGTCTTTCAGCGG CTGGCC GTCAA GGCCGG TTTTGGGCTGCTGGT TERM 4570 3834226 - 3834237 + r 78 -5.8 -4.75776 | opp_overlap 3834219 3834226, overlap 3834218 AAGAAAGCGTAAAAA CGTC CTTG GACG TTTTTGCCTTCAATT TERM 4571 3834237 - 3834226 - R 78 -5.8 -4.7339 | opp_overlap 3834226 3834218, overlap 3834219 AAGAAAGCGTAAAAA CGTC CTTG GACG TTTTTGCCTTCAATT Pnap_3605 3835026 - 3834319 - | CRP/FNR family transcriptional regulator TERM 4572 3834521 - 3834550 + g 76 -10.7 -3.7282 | gap 1, opp_overlap 3834516, overlap 3834522 GGATTGAACAGCGCC GCCAGG-CTGCGCG ACA CGCGCAGGTCTGGG TTGTTCATGCGGTCG TERM 4573 3834522 - 3834549 + g 77 -14.2 -2.83371 | gap 1, opp_overlap 3834516, overlap 3834521 GATTGAACAGCGCCG CCAGG-CTGCGCG ACA CGCGCAGGTCTGG GTTGTTCATGCGGTC TERM 4574 3835576 - 3835586 + G 74 -4.6 -4.57073 | CCCAGGTGATCGAGT CGGG CAT TCCG TTTTTCGCACCCCTG TERM 4575 3835862 - 3835832 - g 79 -9.6 -4.17762 | overlap 3835807 CACGGTTGAAAACAA CTCGTCGGATGCGG CCG CCGCAGCCACCAAG ATTGCCGCTTCCCAG Pnap_3606 3835164 - 3836351 + | extracellular ligand-binding receptor TERM 4576 3837312 - 3837325 + G 86 -8.1 -4.57569 | CCCGACCTACTACTT TGCGC CGCC GCGCA TTTTTGAAGGCCTGC TERM 4577 3837804 - 3837786 - g 81 -4.4 -4.98436 | overlap 3837787 GGAATACTACAAAAA CCCGACGG CCA CGGCCGAG GTGCTGACCGCCGAC Pnap_3607 3836500 - 3838446 + | AMP-dependent synthetase and ligase TERM 4578 3839066 - 3839026 - g 70 -12 -3.14344 | gap 1 GATGGCCGGCATGAA CGTCGAGGA-AAAGCAGGA CATG TGCCGCTTCATCCTCGACG TGAACGAGGAATTCG Pnap_3608 3838457 - 3839242 + | ABC transporter related Pnap_3609 3839380 - 3840309 + | inner-membrane translocator TERM 4579 3840660 - 3840709 + G 73 -11.3 -3.57144 | overlap 3840679 3840702 ATTCCTACCTTGATC CTGGGCGGGCTGTGCGCCATGTC CTTC GGCATTTTGTTCGGCCTGCCCAG TTTGCGCGTCAAGGG TERM 4580 3841272 - 3841305 + G 76 -5.9 -4.57569 | gap 1, overlap 3841276 TTCGGCATCGAGATT TCGACCGC-CGGCGTG TCG CATGCCGAGCTGATGA TTTTTGGCGGCCTGA Pnap_3610 3840336 - 3841412 + | inner-membrane translocator TERM 4581 3842600 - 3842590 - g 74 -2.4 -4.91109 | GCTCGACCAGAAAAA GCTC GAC GCGC TGGGCTTTGCCGGTG Pnap_3611 3841496 - 3842824 + | hypothetical protein Pnap_3612 3842920 - 3843729 + | ABC transporter related Pnap_3613 3843815 - 3845065 + | putative phenylacetate-CoA ligase Pnap_3614 3845161 - 3846150 + | hypothetical protein TERM 4582 3846173 - 3846196 + T 100 -17.4 -5.54894 | CGCGCTTGCCGTCAA GCCGCCCGGT GCAA GCCGGGCGGC TTTTTTTCATGCCTT TERM 4583 3846414 - 3846429 + T 100 -11.8 -5.15969 | opp_overlap 3846414 GGCAGACGCAAAAAA GCCCCG CTGC CGGGGC TTTTTTCAGTTCAGC TERM 4584 3846429 - 3846414 - T 100 -11.8 -5.1287 | opp_overlap 3846414 GGCAGACGCAAAAAA GCCCCG CTGC CGGGGC TTTTTTCAGTTCAGC Pnap_3615 3846758 - 3846462 - | hypothetical protein TERM 4585 3847093 - 3847109 + G 74 -9.3 -3.86015 | opp_overlap 3847076 GCGGCCACTACCGGC GCCGGCG CCA CGCCTGC TTTGTGCAGGAACTC TERM 4586 3847464 - 3847487 + G 75 -4.5 -4.72272 | gap 1 ACCCGCGTGTTCGAT GCCCACGGCC CCGAC GGC-GTGCGC TTTTTGATGCAGGAG Pnap_3616 3846894 - 3847646 + | hypothetical protein TERM 4587 3847763 - 3847778 + G 71 -6 -4.33258 | overlap 3847762 3847764 ACATCCTTTGCTTGG GCGGCG GCCC CGCCGG TTTGTATTTCGGCCT Pnap_3617 3847744 - 3850212 + | salicylyl-CoA 5-hydroxylase Pnap_3618 3850269 - 3850745 + | MarR family transcriptional regulator TERM 4588 3851161 - 3851203 + G 74 -9.2 -3.9461 | gap 3 CGCCATGATGGCGCT GGCG-TCC-GACCTGCGGCTG GGAA CGG-CGCAGGCCAGGACCGCC TTCTTGTTCACGCGC Pnap_3619 3850742 - 3851596 + | enoyl-CoA hydratase TERM 4589 3852039 - 3852009 - g 72 -3.8 -4.57569 | overlap 3852010 3852032 CCAGCGGCGCAAAAA TCGCCGCCTTCGCC TTG AGCGAAGCCGATGC CGGGTCGGACGCCGG TERM 4590 3852088 - 3852032 - g 75 -13.7 -3.05384 | gap 3, overlap 3852010 3852009 TTCGCCTTGAGCGAA GCCGA-TGCCGGGTCGGACGCCGG-CGC CATG ACGACCCGCG-CCGACCCAGCGGCCGGC GGCTGGACACTCAAC Pnap_3620 3851624 - 3852805 + | acyl-CoA dehydrogenase domain-containing protein TERM 4591 3852973 - 3852963 - g 76 -8.2 -4.18018 | overlap 3852964 GCGGGCGATTCAAAA CGGC CAT GCCG ACCGGCCGCTGCTGC Pnap_3621 3852802 - 3854430 + | AMP-dependent synthetase and ligase Pnap_3622 3854427 - 3854867 + | thioesterase superfamily protein Pnap_3623 3854864 - 3855259 + | endoribonuclease L-PSP Pnap_3624 3855940 - 3855560 - | hypothetical protein TERM 4592 3855753 - 3855736 - G 73 -12.7 -3.17688 | CAACCACGGCACCAA CGGCTGC GCCT GCAGCCG AACCTGCCACCAAGC TERM 4593 3856485 - 3856501 + H 93 -4.4 -5.61596 | gap 1, overlap 3856475 3856492 TTCGGCGCCAACAGG CCA-GCC TCAA GGCGTGG TTTTTTTCTCGCCGT TERM 4594 3856583 - 3856594 + H 72 -3.6 -4.68384 | TGTCGCCTGTCTGGC CCGT GGCT GCGG TTTTCTTGGGTGAAT TERM 4595 3856902 - 3856888 - g 82 -2.8 -5.243 | overlap 3856889 CAAAGCAGCAAAAAA TTCCAA TCG TTGGAG CCCAAATGGTTCGAT Pnap_3625 3856726 - 3857034 + | hypothetical protein TERM 4596 3857109 - 3857055 - f 100 -10.2 -4.98857 | gap 1, opp_overlap 3857060 3857062, overlap 3857060 3857062 AGGCAACCAGAAAAA TCAAAC-ACCGTATCCGACGCCATT CATATC AATGGCGCTGGATACGGTTGTTTTT TGCTGTTATTGACGG TERM 4597 3857103 - 3857060 - f 100 -14.7 -4.3902 | opp_overlap 3857060 3857062, overlap 3857055 3857062 ACCAGAAAAATCAAA CACCGTATCCGACGCCATT CATATC AATGGCGCTGGATACGGTT GTTTTTTGCTGTTAT TERM 4598 3857060 - 3857104 + F 100 -14.5 -5.31545 | gap 1, opp_overlap 3857055 3857060 3857062, overlap 3857062 ACCAGAAAAATCAAA C-ACCGTATCCGACGCCATT CATATC AATGGCGCTGGATACGGTTG TTTTTTGCTGTTATT TERM 4599 3857062 - 3857101 + F 100 -17.3 -4.71318 | opp_overlap 3857060 3857055 3857062, overlap 3857060 CAGAAAAATCAAACA CCGTATCCGACGCCATT CATATC AATGGCGCTGGATACGG TTGTTTTTTGCTGTT TERM 4600 3857101 - 3857062 - f 100 -17.3 -3.7798 | opp_overlap 3857062 3857060, overlap 3857060 3857055 CAGAAAAATCAAACA CCGTATCCGACGCCATT CATATC AATGGCGCTGGATACGG TTGTTTTTTGCTGTT TERM 4601 3857223 - 3857203 - f 79 -3.2 -5.16841 | CTACACCAAGAAAAA CCCGGC TCATGGGCT GCCGAG GATTCTTAGGCCCGT TERM 4602 3857596 - 3857570 - g 81 -13.1 -3.74693 | gap 1, opp_overlap 3857572 CTCTACGTGATGAAA GACGGCGA-CTC GGCC GAGATCGCCGTC ATTGGCAGTGAAGGC TERM 4603 3857948 - 3857934 - g 82 -3.4 -5.1675 | overlap 3857935 3857938 3857942 CGACCGATGAAAAAA TGACGC AAG GCGCCC TCACCCTTCAGGAAG Pnap_3626 3857378 - 3858097 + | CRP/FNR family transcriptional regulator Pnap_3627 3858167 - 3858904 + | CRP/FNR family transcriptional regulator Pnap_3628 3859802 - 3858924 - | two component LuxR family transcriptional regulator TERM 4604 3860261 - 3860229 - R 100 -15.8 -3.53012 | opp_overlap 3860236, overlap 3860236 GTTTGTCCCCGGAAA CAAAAAAGCCAACC GCATG GGTTGGCTTCTTTG CAAGGTAAACCTTGG TERM 4605 3860236 - 3860254 + r 80 -10.3 -3.91716 | opp_overlap 3860229 3860236 CCCGGAAACAAAAAA GCCAACC GCATG GGTTGGC TTCTTTGCAAGGTAA TERM 4606 3860254 - 3860236 - R 100 -10.3 -5.63517 | opp_overlap 3860236, overlap 3860229 CCCGGAAACAAAAAA GCCAACC GCATG GGTTGGC TTCTTTGCAAGGTAA Pnap_3629 3861082 - 3860408 - | two component Fis family transcriptional regulator TERM 4607 3860571 - 3860581 + g 74 -4.6 -4.58395 | opp_overlap 3860558 3860559, overlap 3860560 AACTCGTCACGCGCA TCGC GCA GCGG TTTTTCGAGCATGAA TERM 4608 3860735 - 3860755 + g 76 -6.2 -4.58663 | overlap 3860736 GGTTCGGGCCAGGCC TTGCTCAA CGGCT TTGAGCAG TTTTTGCAGCGTGAT Pnap_3630 3863461 - 3861164 - | integral membrane sensor signal transduction histidine kinase TERM 4609 3861234 - 3861264 + g 95 -10.4 -4.63218 | opp_overlap 3861235, overlap 3861235 GTAACACGGTTTGAA ATGTCGATGCGCGC GCC GTGCTCATCGACAA TTTTCTTGACCACCG TERM 4610 3861235 - 3861263 + g 77 -13.9 -3.3761 | opp_overlap 3861235, overlap 3861234 TAACACGGTTTGAAA TGTCGATGCGCGC GCC GTGCTCATCGACA ATTTTCTTGACCACC TERM 4611 3861263 - 3861235 - G 75 -11.7 -3.55548 | opp_overlap 3861235 3861234 TAACACGGTTTGAAA TGTCGATGCGCGC GCC GTGCTCATCGACA ATTTTCTTGACCACC TERM 4612 3861450 - 3861464 + g 70 -7.8 -4.08692 | overlap 3861451 TCTTGCCGGCCTTCC TGCGCA TCC TGCGCG TTTTGCAAAAGATTG TERM 4613 3862370 - 3862390 + g 73 -11.1 -3.57561 | overlap 3862356 CGCGGCTTTGGGCGT CAGGTCGCC CTG GGCCACCTG TTTCACCCCTTCGGC Pnap_3631 3864117 - 3863458 - | putative proline rich signal peptide protein Pnap_3632 3865429 - 3864077 - | sun protein TERM 4614 3864330 - 3864280 - GH 77 -8.1 -4.1711 | gap 1, opp_overlap 3864306 3864308, overlap 3864263 3864283 AGCAGGTGCAATAAA CCA-GCCGCCCGCCGGGCTGAAGC AGCG GCCAGAGCGTGGCGAGCAGCCTGG CCTGGATTTGCGCCA TERM 4615 3864481 - 3864448 - GH 93 -17.3 -2.87564 | GGATGCCGTCATAGA GCCGGCCGTCCCACC AGTC GCCGGGCCGGCCGGC ATCGCCCACCACGAT TERM 4616 3864743 - 3864732 - GH 76 -5.8 -4.65895 | TCCTGCACCGAAAAA TGCC CTTC GGCA AAGCCCGGAAGCGAC Pnap_3633 3865706 - 3866197 + | transposase TERM 4617 3866368 - 3866356 - g 74 -9.1 -3.9461 | CGGGGCGAAGAACAA CGCGA CAT TCGCG AGTTGGGCTACCGCG Pnap_3634 3866305 - 3866535 + | transposase Pnap_3635 3866618 - 3867076 + | hypothetical protein Pnap_3636 3867096 - 3867572 + | putative transposase of insertion sequence ISRm10-1 Pnap_3637 3868599 - 3867580 - | peptidase M48, Ste24p TERM 4618 3868461 - 3868442 - G 81 -2 -5.1287 | overlap 3868444 3868445 TTGACACTGAAAAAA TAGGCCGG ATAG CCGAACCA GCCGTGCGACACCAG Pnap_3638 3869232 - 3868639 - | LemA family protein TERM 4619 3868725 - 3868759 + g 83 -15 -3.40522 | opp_overlap 3868731, overlap 3868728 3868753 AACCGAACAGTCGGG CAATCAGCAGGGCCGG AAA CTGGCCCTGCGCATTG TTGTAGTCGAGCACT TERM 4620 3868728 - 3868756 + g 79 -10.9 -3.84406 | opp_overlap 3868731, overlap 3868725 3868753 CGAACAGTCGGGCAA TCAGCAGGGCCGG AAA CTGGCCCTGCGCA TTGTTGTAGTCGAGC TERM 4621 3868753 - 3868731 - G 75 -14.8 -2.71483 | opp_overlap 3868728 3868725 ACAGTCGGGCAATCA GCAGGGCCGG AAA CTGGCCCTGC GCATTGTTGTAGTCG TERM 4622 3869251 - 3869279 + r 100 -9.7 -4.84761 | gap 1 AACGCTTCCTGGAAG TGCGGCGGTTTC CCCAAT GAAACC-CCGCA TTTTTCTGACAGTCT TERM 4623 3869476 - 3869450 - R 100 -18.1 -5.42259 | opp_overlap 3869471 TCAGGCGTAAAAAAA GCCCCGCACTT TTTTC AAGTGCGGGGC CTGGCGCCCCGTTCA Pnap_3639 3873728 - 3869514 - | DNA-directed RNA polymerase subunit beta' TERM 4624 3872780 - 3872808 + g 72 -12.3 -3.28924 | overlap 3872805 3872807 GCGCGCGCTTGTTCG CGCCCGTCATGGC CTT GCCACGGCGGCCG TTGTCCAGCAAGCTG TERM 4625 3873575 - 3873563 - G 78 -3.3 -5.00616 | opp_overlap 3873563 TCTTGGCGCAAAAAA GACCG TCG CGCTC TGGCTTGAAGGTGCG Pnap_3640 3877860 - 3873748 - | DNA-directed RNA polymerase, beta subunit TERM 4626 3874276 - 3874249 - G 73 -11.2 -3.57792 | GGAGGCACCGTCAAA CACCGGCGTGGC AAAT GGCACGCCCGTG GTCAGGTTCTGGGCC TERM 4627 3875080 - 3875109 + g 86 -8.6 -4.56775 | gap 1, opp_overlap 3875040 3875055, overlap 3875070 3875069 3875066 3875083 CGAGCCCTGGCTGAC GCGCAGCGAGGTG TCTTT CACATCGCTG-GC TTTTTCGCCGAAGAT TERM 4628 3876432 - 3876451 + g 73 -8.6 -4.09739 | gap 1 CCTTTTCGATACGCG CCAG-ACCG GTG CGGTACTGG TTTTCAGCGAGTTCG TERM 4629 3878052 - 3878015 - R 88 -10.1 -4.42386 | opp_overlap 3878013 3878015 3878017, overlap 3877987 3878017 TCGGGATTCAGAAAA CACTGGAAAAAAGACTA CTTT TAATCTTTTTTCCGGTA TCTTTCTATCAATCC TERM 4630 3878017 - 3878050 + r 73 -10.5 -3.38696 | opp_overlap 3878015 3878017, overlap 3878015 3878013 GGGATTCAGAAAACA CTGGAAAAAAGACTA CTTT TAATCTTTTTTCCGG TATCTTTCTATCAAT TERM 4631 3878050 - 3878017 - R 80 -10.5 -3.82117 | opp_overlap 3878017 3878015 3878013, overlap 3878015 GGGATTCAGAAAACA CTGGAAAAAAGACTA CTTT TAATCTTTTTTCCGG TATCTTTCTATCAAT TERM 4632 3878176 - 3878138 - R 100 -16.1 -3.36991 | opp_overlap 3878143, overlap 3878143 CATCAGCCTTAAACA GGAAAGGCTGGAAGCCC GTGGA GGTCTTCCAGCCTTTGC AAACTCCAAGAATTA TERM 4633 3878143 - 3878171 + r 95 -14.6 -3.55444 | opp_overlap 3878138 3878143 GCCTTAAACAGGAAA GGCTGGAAGCCC GTGGA GGTCTTCCAGCC TTTGCAAACTCCAAG TERM 4634 3878171 - 3878143 - R 100 -14.6 -4.00532 | opp_overlap 3878143, overlap 3878138 GCCTTAAACAGGAAA GGCTGGAAGCCC GTGGA GGTCTTCCAGCC TTTGCAAACTCCAAG Pnap_3641 3878566 - 3878189 - | ribosomal protein L7/L12 Pnap_3642 3879204 - 3878653 - | ribosomal protein L10 TERM 4635 3879436 - 3879463 + r 100 -12.8 -4.62069 | overlap 3879438 CCGGCAGCCCACCAC TCTGAACGACGC TTGC GCGTCGTTCAAA TTTTTACCCTCAAGC TERM 4636 3879438 - 3879461 + r 83 -15.4 -2.61831 | overlap 3879436 GGCAGCCCACCACTC TGAACGACGC TTGC GCGTCGTTCA AATTTTTACCCTCAA rplA 3880168 - 3879473 - | 50S ribosomal protein L1 Pnap_3644 3880599 - 3880165 - | ribosomal protein L11 Pnap_3645 3881372 - 3880776 - | NusG antitermination factor TERM 4637 3881135 - 3881148 + g 77 -3.8 -4.8543 | opp_overlap 3881134 3881135, overlap 3881134 AGCCGGGGAAGAAAC GACG TTCGGT CGTC TTTTTCTGGCCATTC secE 3881755 - 3881372 - | preprotein translocase subunit SecE TERM 4638 3881801 - 3881839 + r 85 -11 -3.97102 | overlap 3881802 3881805 CGTCTCTGCAGACGC TTAAGCCCACCCGAAGTT TTT AACTCCCGGTGGGCTTGC TTATTACTTTTCAAT TERM 4639 3881802 - 3881838 + r 86 -14.5 -2.97177 | overlap 3881801 3881805 GTCTCTGCAGACGCT TAAGCCCACCCGAAGTT TTT AACTCCCGGTGGGCTTG CTTATTACTTTTCAA TERM 4640 3881805 - 3881835 + r 95 -14 -3.60839 | overlap 3881802 3881801 TCTGCAGACGCTTAA GCCCACCCGAAGTT TTT AACTCCCGGTGGGC TTGCTTATTACTTTT Pnap_3647 3883173 - 3881983 - | elongation factor Tu TERM 4641 3882024 - 3882054 + g 70 -9.8 -3.67775 | gap 2 CAGCGCCCACGGTAC GGCC-GC-CTTCGC GGATG GCGAAGCGCAGGCC TTCTTCCATGGCAAT TERM 4642 3882973 - 3883002 + g 77 -2.7 -5.06414 | overlap 3882969 CGTTTCGTATTCGAC GTGGGCGGTGTTG ATGG TGATGCCGCGCGC TTTTTCTTCGGGCGC Pnap_3648 3884578 - 3883841 - | uracil-DNA glycosylase Pnap_3649 3885384 - 3884593 - | indole-3-glycerol-phosphate synthase TERM 4643 3885118 - 3885091 - G 95 -9.8 -4.56597 | GCTGCCCTGGAAAAA CTGCTGGTCGGT CAGC ACCGACAGGCAG GCAGCGCCGAACTCG TERM 4644 3885286 - 3885265 - G 76 -10.1 -3.86015 | opp_overlap 3885258 CAGGGCGCCGACAAA GTCCCGCGT CAGC ACGCGCGAC TCGGCGTCCTTGCGC Pnap_3650 3886543 - 3885440 - | anthranilate phosphoribosyltransferase TERM 4645 3885612 - 3885571 - G 71 -10.7 -3.53224 | gap 1, opp_overlap 3885599, overlap 3885553 CATTGGCGGCGTAAA GCGCGGCGC-CGGCATTGAG GAT CACGATGTCGCGCGGCGCGC CCGGCTGGTTGTCGA Pnap_3651 3887585 - 3886536 - | threonine aldolase TERM 4646 3887425 - 3887446 + g 74 -5.7 -4.46212 | ACGAACAGCGCGGCC TCGAAGCCC AGCA GGGCAGCGA TTTTGTCCTGCAGCG Pnap_3652 3888227 - 3887643 - | anthranilate synthase component II Pnap_3653 3888545 - 3888231 - | chorismate mutase Pnap_3654 3890048 - 3888549 - | anthranilate synthase component I TERM 4647 3888579 - 3888600 + g 76 -13.7 -3.2285 | gap 1, overlap 3888576 TTCAACCAGTTCGCT GGCGCGCAGC AGC GC-GCGCGCC TTGGCTTCGGTTTCT TERM 4648 3889702 - 3889684 - G 74 -5.2 -4.56775 | overlap 3889685 AGCCCGCCGCAAAAA CGCGGC AGTCCGG GCCGCA GCGCGACCTTGAAGC TERM 4649 3889918 - 3889905 - G 72 -2.3 -4.7373 | CGATTCGAGCAAAAA GCTGA ATTT TCCGC CGTCCCTGGCGTTGG TERM 4650 3890007 - 3890023 + g 85 -10.1 -4.28432 | CGGAATGCGGTTGTA GCCTTGC GCC GCGAGGC TTTTAAATTCGAGTT TERM 4651 3890126 - 3890108 - H 77 -8 -4.18018 | opp_overlap 3890118, overlap 3890109 TTCCGTCATTCAAAA CGCCCCGA AGT CCGGGGCC GGGATGCTCTTGCGT TERM 4652 3890125 - 3890109 - H 72 -11.5 -3.10597 | opp_overlap 3890118, overlap 3890108 TCCGTCATTCAAAAC GCCCCGA AGT CCGGGGC CGGGATGCTCTTGCG TERM 4653 3890458 - 3890447 - H 100 -4.4 -5.93809 | opp_overlap 3890447 GCTCCACAAAAAAAA GAAC GACC GTTC TATTTAATAACTTAT TERM 4654 3890845 - 3890864 + G 74 -5 -4.56597 | gap 1 CAGGCTGATTCCGGG CCTG-CTCA AGA TGGGCCAGG TTTTTGCCGACCAGA Pnap_3655 3890486 - 3891073 + | putative lipoprotein transmembrane Pnap_3656 3891810 - 3891106 - | phosphoglycolate phosphatase Pnap_3657 3892651 - 3891980 - | ketopantoate reductase ApbA/PanE TERM 4655 3892692 - 3892710 + r 85 -13.1 -3.5393 | overlap 3892707 CCGTGCTCGCGCAGG GCGGCGG CATCA CCGCCGC TTTAAAAGCGCTCCT Pnap_3658 3893251 - 3892712 - | cytochrome B561 Pnap_3659 3893545 - 3893288 - | hypothetical protein Pnap_3660 3894327 - 3893635 - | ribulose-phosphate 3-epimerase apaG 3894409 - 3894837 + | ApaG TERM 4656 3895451 - 3895477 + G 76 -5.9 -4.58395 | overlap 3895452 TTTCATGCCCTGCCC G-CCGATGTGCAG GAA CTGCGCA-CGGTC TTTTTCCAGCCTAGG TERM 4657 3895452 - 3895475 + G 74 -9.6 -3.90762 | gap 1, overlap 3895451 TTCATGCCCTGCCCG CCGATGTGCAG GAA CTGCGCA-CGG TCTTTTTCCAGCCTA TERM 4658 3895816 - 3895774 - g 73 -12.6 -3.23216 | overlap 3895775 GCTGATCAGCACCAA TTCGACCCTGCTGTCGGCCA AGA TGGCCGAGCGCAGCGCCGAG ACCGGCGAGCACTAC TERM 4659 3895815 - 3895775 - g 79 -16.1 -2.53715 | overlap 3895774 CTGATCAGCACCAAT TCGACCCTGCTGTCGGCCA AGA TGGCCGAGCGCAGCGCCGA GACCGGCGAGCACTA TERM 4660 3896788 - 3896806 + G 80 -5.9 -4.7254 | opp_overlap 3896737, overlap 3896790 TATTCTGGCGCGCTG GCGCAGC CATCC GCTGCAC TTTTTCATCCCCCGT Pnap_3662 3894860 - 3896824 + | putative site-specific recombinase transmembrane protein TERM 4661 3896948 - 3896911 - f 72 -11.9 -2.70932 | gap 1, opp_overlap 3896944 TCCCCCTGGCAAGCA CCGGCCTTTTGACCGGCC TGC GGCCTG-CTCAAGGCCGG GCCTCCTGCCGGGCT TERM 4662 3897198 - 3897245 + G 100 -14.9 -4.72986 | gap 3, overlap 3897200 GGCACCTTTGCCGGC CTGGCCGGCTTCACCGGC-GCGGC CTG GCCGCTGCAGG-GAA-CCGGCCTG TTTTTGCTCGAACTG TERM 4663 3897200 - 3897243 + G 100 -16.1 -3.98256 | gap 3, overlap 3897198 CACCTTTGCCGGCCT GGCCGGCTTCACCGGC-GCGGC CTG GCCGCTGCAGG-GAA-CCGGCC TGTTTTTGCTCGAAC Pnap_3663 3897027 - 3898286 + | sodium/hydrogen exchanger Pnap_3664 3898276 - 3899421 + | carboxylate-amine ligase TERM 4664 3899606 - 3899624 + G 93 -8.8 -5.02476 | CCATTTCCAGCGACA TGCTGGTC GAG GGCCGGCA TTTTTTCGCCGATGT TERM 4665 3900271 - 3900252 - g 78 -3.4 -5.0133 | overlap 3900255 TATTTCCTTAAAAAA CCAGCTCG ACTA CGTGCTCG CCGGCGGCGACGACT TERM 4666 3900423 - 3900437 + G 84 -2.7 -5.24551 | overlap 3900424 CGATGCGCGGGGCCA GCGCC TGACC GGCGA TTTTTCTTCCTTTGA Pnap_3665 3899467 - 3900465 + | thiamine-monophosphate kinase Pnap_3666 3900475 - 3901032 + | phosphatidylglycerophosphatase A TERM 4667 3901062 - 3901051 - g 72 -2.2 -4.7254 | ACTCGCTATCAAAAA CAGA GCTG TCCG CGCTTACCCCACCTG Pnap_3667 3901029 - 3901550 + | CinA domain-containing protein Pnap_3668 3901839 - 3901561 - | hypothetical protein TERM 4668 3901852 - 3901901 + r 70 -7 -4.07568 | opp_overlap 3901849, overlap 3901851 3901848 CATGGCATTCAACGC GCGTTGCCCAGCGTGGCCGACA GCGTGA TCTCTGGAACGCTGGCCAGCGC TTTTGACAGCGGACA Pnap_3669 3902288 - 3901845 - | OsmC family protein TERM 4669 3902341 - 3902326 - R 93 -11.8 -4.25104 | opp_overlap 3902316 GGGGTTGCAGGAAAA GGCGCC GCAA GGCGCC CGGTCCAAGCAGTTT Pnap_3670 3903191 - 3902406 - | spermidine synthase-like protein TERM 4670 3902738 - 3902721 - G 73 -8.4 -4.08394 | ACAGTCGTCGTAAAA GCGCTG GGTGCA CAGCGC GGCGGGCTGGCCCTC TERM 4671 3903028 - 3903015 - G 75 -3.1 -4.87626 | gap 1 GTCGAACAGCAAAAA GC-CCA TCA TGGTGC GGGTGTAGTCCACCT Pnap_3671 3904025 - 3903243 - | CRP/FNR family transcriptional regulator Pnap_3672 3904457 - 3904068 - | hypothetical protein TERM 4672 3904203 - 3904188 - G 93 -8.2 -5.06414 | overlap 3904189 GCTGGCGAACAAAAA CGCGCG CCCC CACGCG CCGGTATTGGCCGTG TERM 4673 3904397 - 3904354 - G 74 -10 -3.73224 | overlap 3904358 3904390 3904391 CCATCGGTCACGAAA GCGACCGCGCCCGCGCTGCC TGCC GGCTGCGCCAAAGCGGCGGC GCCGAGGCCAAAAAC TERM 4674 3904428 - 3904412 - G 72 -4.3 -4.62069 | CGCCGAGGCCAAAAA CCGCAAG CGC CATGCAG CGAACGAGGGCCTGG Pnap_3673 3905089 - 3906210 + | hypothetical protein TERM 4675 3906591 - 3906613 + G 70 -10.5 -3.54475 | overlap 3906592 GCCCAGCCCCTGGCC GTGGGCGCG CGGAT CGCGTCCGC TTATGTGCTGCAGGC Pnap_3674 3906234 - 3906908 + | hypothetical protein TERM 4676 3906952 - 3906924 - f 83 -15.3 -2.70932 | gap 1, opp_overlap 3906928 3906931 CGCCGGCCTGAATCA CGCGCGCCCGGC ACGGCA GCCGG-CGCGCG CTTGCAATGCCGGTG TERM 4677 3907108 - 3907072 - g 72 -13.6 -2.71364 | CCAGGCGTGGAACCA GTCAGCCAGCGGCTGG AACCG CCAGACGCCGGCCGTC CACGACTGGCTCATG TERM 4678 3907305 - 3907275 - g 71 -14 -2.53015 | ACATTTCCGAAGCCA TGCTGCGCTTCGCC CAT GACAACGCGCAGCA GGCCGGCTTGCGACA Pnap_3675 3907016 - 3907879 + | methyltransferase type 11 Pnap_3676 3910912 - 3908012 - | putative chaperone protein, HscA/DnaK TERM 4679 3909481 - 3909515 + g 76 -9.2 -4.07568 | gap 1, opp_overlap 3909459 3909476 3909473 GCAAAAAGTAGCTGC GCGCCGAGCCGCCGC CGATGC GCGGCGCCT-GGCCC TTTTGCGACAAGGCG TERM 4680 3909872 - 3909822 - G 81 -4 -5.00884 | gap 2, overlap 3909837 ACCTGCGGGAAAAAA CCG-TCAACGATG-AGACGCTCGA CCTCT TCGCGCGCCAGCATCACCGAGCGG CTGCCGCCAATCAGC TERM 4681 3910309 - 3910342 + g 73 -13.1 -3.14132 | gap 1 TGGGCAGGCCGGCCA GGCGCGCG-GCGCTCA GCG TCAGCGCGCGGGCGCC TTCGTCGAAGGACGC TERM 4682 3910980 - 3910924 - R 71 -12.1 -2.53911 | TCAATGCTCAACTCA CCCCGTCCCCGCGTGACCCCTTCCCCC GCT GGGGGAAGGAGCAATACGGGGATTCAG GCCTCCAGGCTGTTC Pnap_3677 3912890 - 3910977 - | putative molecular chaperone protein HspA/DnaK TERM 4683 3912829 - 3912813 - G 79 -9.4 -4.18494 | opp_overlap 3912813 GATGCCGATGGAAAA CTGCGG CTCGC CCGCAG CGGTTTCGGTGCCTG Pnap_3678 3913453 - 3912887 - | hypothetical protein TERM 4684 3913209 - 3913267 + g 77 -15.9 -2.60496 | gap 1, overlap 3913210 3913258 TCCTGGACGAAGTCG ATCAGGCGCG-CGTCGCGCTGCAGCAGC GCCA GCAGTTGCAGCGCGGCGTCGGGCGTGGC CTGTTTCAAAGGCGC TERM 4685 3913401 - 3913389 - G 83 -4.7 -5.00884 | overlap 3913390 3913397 AGGCTGCTGAAAAAA GCGCC AAA GGCGA TGGGAATGCGCCTGA TERM 4686 3913572 - 3913524 - H 100 -9.4 -5.31275 | gap 2, opp_overlap 3913523, overlap 3913526 GCGGATCACAAAAAA CGGCCGGGACGACACGCCTGCGGC ATG GCACCGGGCGCGTCG-CC-GGCAG CGTTATTTTCCAAGG TERM 4687 3913672 - 3913655 - H 87 -2 -5.60993 | gap 1, opp_overlap 3913655 3913657 3913662, overlap 3913657 GTCTCCACAAAAAAA CA-CCTG ATGAG CAGGCTG TTCACTATTTTCAAG TERM 4688 3914677 - 3914691 + G 80 -5.6 -4.68209 | opp_overlap 3914679, overlap 3914679 AAGGCCAAGCAGAGC AACGCC GAG GGCGTG TTTGTTTATTCGAAT TERM 4689 3914679 - 3914689 + G 71 -8.2 -3.94772 | opp_overlap 3914679, overlap 3914677 GGCCAAGCAGAGCAA CGCC GAG GGCG TGTTTGTTTATTCGA TERM 4690 3915150 - 3915130 - g 83 -5.4 -5.0538 | opp_overlap 3915130, overlap 3915135 GTCGAGGTGAAAAAA GGCAAGCA GGAAG TGATTGCC TTCGTGCCCCCGCTG Pnap_3679 3914029 - 3915252 + | extracellular ligand-binding receptor TERM 4691 3915263 - 3915250 - T 85 -2.3 -5.46657 | opp_overlap 3915253, overlap 3915252 3915253 CAGCCGAAGAAAAAA TAGCC CAGA GGCGA GCCGGGTCGGGGGTT TERM 4692 3915309 - 3915326 + T 100 -11.3 -5.40072 | opp_overlap 3915309 GCGGCATAAAAAAAA CGGCATC CGAA GATGCCG TTTTTTTCGCGAACC TERM 4693 3915326 - 3915309 - T 100 -11.3 -5.93809 | opp_overlap 3915309 GCGGCATAAAAAAAA CGGCATC CGAA GATGCCG TTTTTTTCGCGAACC Pnap_3680 3917612 - 3915375 - | isocitrate dehydrogenase, NADP-dependent TERM 4694 3915770 - 3915813 + g 83 -9.4 -4.25283 | gap 1, opp_overlap 3915786, overlap 3915773 AATCTTCGAGCGACA CGGCCAGCGCCAGGAACTCGC CCA GCGAGTCCCAG-CGCAGGTGG TTTTCCTCGACCAGT TERM 4695 3915773 - 3915810 + g 70 -11.9 -3.13504 | gap 1, opp_overlap 3915786, overlap 3915770 CTTCGAGCGACACGG CCAGCGCCAGGAACTCGC CCA GCGAGTCCCAG-CGCAGG TGGTTTTCCTCGACC TERM 4696 3917574 - 3917544 - G 74 -9.7 -3.88291 | gap 1 CACGACGGGCAGAAA CGACCAGGTCGCCA GCAG CGGCG-CCTCGTCG GTGAGCGTGTAGATG TERM 4697 3917839 - 3917809 - H 83 -7.6 -4.56597 | gap 2 TGCTGGCCGCAAAAA CGCA-GGCGC-GGC GGGTG GCCAGCACCCTGCG CAAGCCACGCTCCCT Pnap_3681 3917942 - 3918226 + | SpoVT/AbrB domain-containing protein Pnap_3682 3918230 - 3918634 + | PilT domain-containing protein TERM 4698 3918705 - 3918674 - T 100 -24.6 -3.57263 | opp_overlap 3918674, overlap 3918681 ATGGCGAGCCGGAAA GCGAAAACGGCGCC CGAA GGCGCCGTTTTCGC TTTTTTTAGAACTAA TERM 4699 3918674 - 3918705 + T 100 -24.6 -5.42259 | opp_overlap 3918674 3918681 ATGGCGAGCCGGAAA GCGAAAACGGCGCC CGAA GGCGCCGTTTTCGC TTTTTTTAGAACTAA TERM 4700 3918698 - 3918681 - T 100 -14.1 -4.35524 | opp_overlap 3918674, overlap 3918674 GCCGGAAAGCGAAAA CGGCGCC CGAA GGCGCCG TTTTCGCTTTTTTTA Pnap_3683 3920984 - 3918792 - | malate synthase G TERM 4701 3919388 - 3919399 + g 74 -5.8 -4.46212 | overlap 3919382 TGTTGGCGCCGGCTT TCGG GTGG CCGA TTTTCTGCTCCAGCA TERM 4702 3921135 - 3921085 - R 89 -13.9 -3.61609 | overlap 3921086 GGATGGAAATGATAA GTCGTCATGCGGGCGC-GCCCTGCC CCA GGCCGGGCAGCGCCAGCACATCG-C GCAGGCTGACTCCGG TERM 4703 3921135 - 3921086 - R 83 -14.1 -2.76483 | gap 1, overlap 3921085 GATGGAAATGATAAG TCGTCATGCGGGCGC-GCCCTGCC CCA GGCCGGGCAGCGCCAGCACATCGC GCAGGCTGACTCCGG Pnap_3684 3921838 - 3921089 - | haloacid dehalogenase, type II TERM 4704 3923242 - 3923254 + G 78 -6.9 -4.58283 | overlap 3923228 GCGCCGCCTGCTGGG CTCGG GCG CCGGG TTTTTCCCGGCCTTC TERM 4705 3923963 - 3923908 - g 76 -10.8 -3.75024 | CCTGACCACCAACAA CGACCGCGTGCGGGCGCGCGAATGGC TGCT GCCGATCCTGCGCTCGCACCTGGCCG GCTACAGCGCGGCCG Pnap_3685 3922034 - 3924268 + | pyruvate carboxyltransferase TERM 4706 3924516 - 3924532 + G 76 -9.4 -4.08767 | GGCATGTCCTTGCTG CGCTGG ATTCG CCAGCG TTTTGAAAGCCTGCC Pnap_3686 3924324 - 3925019 + | two component transcriptional regulator Pnap_3687 3925016 - 3926383 + | integral membrane sensor signal transduction histidine kinase Pnap_3688 3927475 - 3926429 - | aldo/keto reductase TERM 4707 3927182 - 3927159 - G 72 -11.6 -3.28712 | CCGCCCTGCCCATAA GGGCCGGGCC ACAT GTCCCAGCCC GCCTTGCTGGAAATG TERM 4708 3927549 - 3927566 + H 71 -10.5 -3.26405 | overlap 3927544 3927548 3927551 GCGGCGCTCACCTGC GGCCGGG TCTT TCCGGCC TGGTTTTTCAATCGC TERM 4709 3927551 - 3927569 + H 75 -5.9 -4.66609 | overlap 3927544 3927549 3927548 GGCGCTCACCTGCGG CCGGGTC TTTCC GGCCTGG TTTTTCAATCGCATC TERM 4710 3927681 - 3927669 - H 79 -3.3 -5.24129 | GGCCCGGATAAAAAA CCATG CTC CCTGG CCGGCTGCGCTGGCG TERM 4711 3928190 - 3928176 - g 77 -2.7 -5.00616 | GCCGTGCTGAAAAAA GCCGG GGTCG CGGGC ATGCCCAAGAATTGG TERM 4712 3928866 - 3928816 - g 76 -8.7 -4.13014 | opp_overlap 3928864 3928864 TCGAGACCGCCAAAA CCGGCGGGCTGGTGCCCTCGGCG GCCCA CGGCATGGCCATCAGCCCTGCGG CTGAAGGCGCCATCA Pnap_3689 3927720 - 3928970 + | extracellular solute-binding protein TERM 4713 3929791 - 3929829 + G 70 -8 -4.07568 | GGCCGGCCAGCGTGT GAGCCGCATTGCGGATTC GCT GAACTGGCAAAGCGGCGC TTTTGGCGGCCAGAC Pnap_3690 3929003 - 3930190 + | maltoporin precursor TERM 4714 3930528 - 3930563 + G 71 -6 -4.25104 | TCAGCCTGCTCTACG TCGGCGGCTCGATGCT GATC GGCATGGTGCTGGCGA TTTTCCTGGACCAGA TERM 4715 3930707 - 3930720 + G 72 -3.8 -4.55798 | AAGCTCATGCACGAC CTGG GCTGGG CCAG TTTTCATTTCGACTG TERM 4716 3931091 - 3931131 + G 76 -11.1 -3.81488 | CTGGGCGCCGCCAGC GCCACCATGATGCTGGCCA CGG TGGCCGCCATCGTCGTGCC TTATCTTTACAGCGA Pnap_3691 3930293 - 3931174 + | binding-protein-dependent transport systems inner membrane component TERM 4717 3931216 - 3931238 + G 78 -4.7 -4.7254 | GCGCGCTGCTCTACG CGGTGCTGC TGGTC GCGGCCCTG TTTTTCCTGGCGCCT TERM 4718 3931616 - 3931664 + G 76 -6 -4.57569 | gap 2, overlap 3931603 GTCCAGTTCCATCGG CGGACTGGTGCTGGTGCATTGCCT GGC GGGCA-TG-GCCGGCACCACGCTG TTTTTCCGCAACTAC Pnap_3692 3931164 - 3932033 + | binding-protein-dependent transport systems inner membrane component TERM 4719 3932456 - 3932513 + G 72 -14 -2.73309 | gap 2, overlap 3932457 CCGCCCGGCGCAGCT CTCCGGCGGCCAGCGCCAGCGCGTCGCC ATGG GGCG-CGCCCTGGCGCGCGAC-CCGCAG ATATTCTTGTTCGAC Pnap_3693 3932040 - 3933113 + | ABC transporter related TERM 4720 3933858 - 3933881 + G 90 -13.8 -4.08767 | opp_overlap 3933844 3933857 3933856 ACGGTGGCCGAAACC GTCGGCGTGG GCAG CCGCGCCGGC TTTTACGACGGTGCC Pnap_3694 3933207 - 3934673 + | glucose-6-phosphate 1-dehydrogenase Pnap_3695 3934728 - 3935735 + | glucokinase TERM 4721 3936026 - 3936037 + G 71 -5.8 -4.30576 | GCATCACCCTGGTCC TGGC GCTT GCCA TTTTGGTGATGAAAC Pnap_3696 3935812 - 3936072 + | hypothetical protein Pnap_3697 3936118 - 3937083 + | LysR family transcriptional regulator Pnap_3698 3937824 - 3937189 - | lysine exporter protein LysE/YggA TERM 4722 3937889 - 3937855 - H 70 -2.8 -4.74103 | gap 1, overlap 3937862 GGGTGAATGGAAAAA GATCAAAGCGCCTGC CTTGCT GCAGACGCCCCG-CC AGTGTCGCGACTCCA TERM 4723 3937883 - 3937862 - H 80 -9.4 -4.13748 | overlap 3937855 TGGAAAAAGATCAAA GCGCCTGC CTTGCT GCAGACGC CCCGCCAGTGTCGCG TERM 4724 3938850 - 3938828 - g 73 -12.7 -3.16881 | GACGCAGGCCATCAA GCAGGCCGC GCGCG ACGGCCTGC TGCAGGGCTGAAGCG Pnap_3699 3937968 - 3938861 + | chromosome replication initiation inhibitor protein Pnap_3700 3939358 - 3939014 - | PsiF repeat-containing protein TERM 4725 3939106 - 3939127 + g 76 -8.7 -4.20768 | gap 1, overlap 3939106 TCATCTTGCTTTGCT G-GGTGGCGT CCT GCGCCACCAC TTCTTTCTTGGCGCT TERM 4726 3939744 - 3939712 - g 80 -4.8 -4.86731 | gap 1, overlap 3939713 3939732 GCCGCTCAAACAAAA CCCGCGC-CAGAC GGCCGAAA GCCTGCGCGCGCG GCTGCTGCTGGCCCC TERM 4727 3940211 - 3940192 - g 72 -4.2 -4.56597 | overlap 3940195 TTTCCTCGCCAAAAA GACCGTCA AGTC CGACGACC GCGAGTTCACCGCCT TERM 4728 3940766 - 3940780 + G 80 -5.6 -4.72272 | opp_overlap 3940758, overlap 3940761 3940760 GAATGGACCAGCGCC GACGCG GTG CGCTTC TTTTTGCTCAGCCGC TERM 4729 3941037 - 3941053 + G 72 -7.2 -4.18018 | CGGCCGCCGGCTTTG CGCCGC ACGAC GTGGCG TTTTACCTGCGCGAG argS 3939548 - 3941224 + | arginyl-tRNA synthetase TERM 4730 3941250 - 3941228 - f 100 -16.3 -3.2218 | opp_overlap 3941222 3941221 CGCAAGATGTAGCAA GGCTGCGGG CAACC CCCGCAGCC ATTCAAATTTCAGTC TERM 4731 3941539 - 3941506 - g 78 -6.6 -4.56597 | gap 2, opp_overlap 3941505 3941507, overlap 3941507 CCTGGCCGGGAAAAA CCCCGCCAGGCCGGCG GCTC CGTCGGC--GGCGGGT GATCTCATCCCGCCG Pnap_3702 3941267 - 3942136 + | sporulation domain-containing protein TERM 4732 3942372 - 3942345 - g 88 -16.2 -3.30124 | opp_overlap 3942331, overlap 3942317 CCTGACGCTCGACAA GCCGGCCGCCAC CGAA GCGCCGGCCGGC ATGGTCGAGGTGGTC TERM 4733 3942604 - 3942576 - g 83 -6.8 -4.87786 | overlap 3942578 GGAACTGCACAAAAA GGTTTTCAACGC CATTC ACGTTGAAAAGC AGACGCTCGCCACCG Pnap_3703 3942211 - 3942873 + | DSBA oxidoreductase TERM 4734 3942938 - 3942915 - f 76 -10.2 -3.66356 | gap 1, opp_overlap 3942915 3942915 AGCCTGAAGCGCAAA GCCCTGGCCAG TGG CAGGCC-GGGC CTTCATATGCTACTT TERM 4735 3943024 - 3943076 + F 86 -12.6 -3.62597 | gap 1, overlap 3943011 ATCGTGACGCCACGG CAGGTTTGGCGCGCTCGGTCGCG GGCCATTG CGCCGCCG-GCGCGCCTGCCCTG TTCTTGAACCCTGCA TERM 4736 3943337 - 3943353 + G 83 -7.9 -4.56597 | overlap 3943338 GCCGTTTGCACTCCT GGCCCTG AGC CAGGGCA TTTTTGCCCAGCAGC TERM 4737 3943437 - 3943426 - g 85 -5.8 -5.00616 | CGGTTCCCCAAAAAA TGGC GCCT GCCA TTCGCATCGAGCCCA TERM 4738 3943818 - 3943796 - g 76 -13.4 -3.16564 | GCTTGACGGCATCAA CGCTGGCGAC ACG GTCGCCATCG CGCCGCTGGAGAGCC Pnap_3704 3943302 - 3944966 + | polypeptide-transport-associated domain-containing protein TERM 4739 3945155 - 3945112 - g 71 -5.8 -4.36914 | gap 1, overlap 3945114 3945115 TGCCGTTTCAGAAAA CACCCGCAGCGCCGG-CAAGA AAA TCTCGTCCTGCGCCTCGGCGG CTGGCGGCGGCGCCC TERM 4740 3946957 - 3946967 + G 74 -4.6 -4.59773 | opp_overlap 3946953 AGATGGCAACACCAG CGGC AGT GTCG TTTTTGCGGCTGGCA TERM 4741 3947077 - 3947107 + G 86 -8.2 -4.57341 | GGGTAACTTTACGTT GACTTCTGGCGCCA CGC TGACGTCAGGTGTC TTTTTGCCAGGGATT Pnap_3705 3945047 - 3948364 + | filamentous haemagglutinin outer membrane protein Pnap_3706 3948484 - 3949224 + | hypothetical protein TERM 4742 3949355 - 3949309 - f 73 -5.7 -4.37737 | overlap 3949311 GAATGAAAAACCAAA TACCCTCAGCAAGGCCGCCCG GATTG CAGCCCGACTTGCTGAAGGCG CATTCCAGCAGCCTG TERM 4743 3949353 - 3949311 - f 76 -10.5 -3.76474 | overlap 3949309 ATGAAAAACCAAATA CCCTCAGCAAGGCCGCCCG GATTG CAGCCCGACTTGCTGAAGG CGCATTCCAGCAGCC TERM 4744 3949708 - 3949722 + G 76 -5.7 -4.56133 | AGACTCCTACCTACT TCGCT ATGGC AGCGA TTTTACTTATTGGCG TERM 4745 3950142 - 3950115 - g 81 -12.8 -3.72576 | opp_overlap 3950114 3950111, overlap 3950117 GCCTGCTTTATGAAA TACTCGGCAAGC ACCA GCTTGCCAAGCA GTTCTATCTGGATGC TERM 4746 3950140 - 3950117 - g 76 -13.2 -3.44848 | opp_overlap 3950114 3950111, overlap 3950115 CTGCTTTATGAAATA CTCGGCAAGC ACCA GCTTGCCAAG CAGTTCTATCTGGAT Pnap_3707 3949373 - 3950488 + | glycosyl transferase family protein Pnap_3708 3950655 - 3951299 + | OstA family protein TERM 4747 3951823 - 3951845 + G 87 -5.5 -5.13722 | gap 1 CGGGTCGAGATTGCC CGCGCCCTGG CCAC CCAGC-CGCG TTTTATTTTGCTCGA Pnap_3709 3951304 - 3952101 + | ABC transporter related TERM 4748 3952165 - 3952193 + G 86 -15.3 -3.55563 | overlap 3952166 GGCGCTCACGCCGCA ACTGCAGCAGTCG ATC CGGCTGCTGCAGC TTTCGACGCTGGAGT TERM 4749 3952166 - 3952192 + G 87 -18.8 -2.73124 | overlap 3952165 GCGCTCACGCCGCAA CTGCAGCAGTCG ATC CGGCTGCTGCAG CTTTCGACGCTGGAG Pnap_3710 3952112 - 3953677 + | RNA polymerase, sigma 54 subunit, RpoN TERM 4750 3955013 - 3955003 - g 76 -8.2 -4.14472 | opp_overlap 3955009, overlap 3954994 3955004 CGAACAGGCGCAAAA CGCC TGG GGCG AGGAAGCCTCGGACT Pnap_3711 3953825 - 3955240 + | putative RNA methylase TERM 4751 3955612 - 3955595 - g 70 -7.7 -4.07568 | opp_overlap 3955601 CCGTTGCCGGCAAAA CCCTGCT GCTG AGCAAGG ATCGGCATGTGCTTT Pnap_3712 3955237 - 3955680 + | hypothetical protein Pnap_3713 3956163 - 3955720 - | hypothetical protein TERM 4752 3956114 - 3956102 - G 74 -4.7 -4.54047 | overlap 3956103 3956106 CCACCCCACACAAAA GCGAC GGC GGCGC CTGCCAGCGTGAGCA Pnap_3714 3956551 - 3956210 - | hypothetical protein TERM 4753 3956514 - 3956487 - G 76 -8.4 -4.15854 | overlap 3956488 AAATTCAGTTGAAAA CCGGCGCCAG TCCAATCT CTGGCGCCAA AATTGAAACTGCCGC TERM 4754 3956927 - 3956963 + r 74 -8.6 -3.95584 | opp_overlap 3956928 3956929, overlap 3956929 CCTTCGATATCAAAA AGGCTGCTTGCGCATG GTGTG CGGGCGCAGGCAGCTA TTTAATTAGTAGCAC TERM 4755 3956962 - 3956928 - R 76 -5.5 -4.8048 | opp_overlap 3956927 3956929, overlap 3956929 CTTCGATATCAAAAA GGCTGCTTGCGCATG GTGTG CGGGCGCAGGCAGCT ATTTAATTAGTAGCA TERM 4756 3956929 - 3956961 + r 89 -13.4 -3.56844 | opp_overlap 3956928 3956929, overlap 3956927 TTCGATATCAAAAAG GCTGCTTGCGCATG GTGTG CGGGCGCAGGCAGC TATTTAATTAGTAGC Pnap_3715 3957369 - 3956983 - | PilT domain-containing protein TERM 4757 3957020 - 3957042 + g 100 -9 -4.81851 | opp_overlap 3957017 3957020 AAGGCGCCAAAAGCA GCATCGCAGG TCA CCAGCGTTGC TTTTTCAATTTCGCT Pnap_3716 3957611 - 3957366 - | prevent-host-death family protein Pnap_3717 3958721 - 3957654 - | cytidyltransferase-like protein TERM 4758 3957697 - 3957685 - G 78 -3.4 -4.97405 | AGCGAGAAAAAGAAA TCCA GCATG TGGA AATGGTCATCATGGA TERM 4759 3958097 - 3958115 + g 80 -5.8 -4.7497 | opp_overlap 3958083 3958085 ACACCGGCGGGTACG GCGAGCCG GCC CAGCGCGC TTTTTCCTGCCTGAG TERM 4760 3958520 - 3958485 - G 72 -4.4 -4.59773 | opp_overlap 3958487 3958488 3958490 3958502, overlap 3958486 3958487 GCGCACCGGCAAAAA CCGGACCCGGCTGCGG TCGG CCTCGGGCAGGGCCAG CCGGATCATTTCGGC Pnap_3718 3960429 - 3958729 - | NAD+ synthetase TERM 4761 3958864 - 3958908 + g 73 -3.3 -4.79223 | overlap 3958829 GCGCTCTATCATCGC GCGGTTTTCGGCTTCCTTGCG CAA CGCATCGACGAAGCAAGCCGC TTTTTCATACTCTCC Pnap_3719 3961636 - 3960443 - | nicotinate phosphoribosyltransferase TERM 4762 3960783 - 3960773 - G 73 -8.2 -4.03234 | TTCGCCCCAGACAAA CGGG TCG CCCG AATCATGGCGCAGGC Pnap_3720 3962551 - 3961670 - | hypothetical protein TERM 4763 3962911 - 3962964 + G 74 -13.8 -2.93089 | gap 3, opp_overlap 3962879, overlap 3962909 TACCTGGAGCAGCTG GGCA-GCTGGGGCGG-CCGGGCTCGCG ACC CGCGCGGCTGGTCCGCCAC-GCATGCC TACTTTGCCCTGCTG Pnap_3721 3962683 - 3963375 + | NUDIX hydrolase Pnap_3722 3963467 - 3964285 + | SecC motif-containing protein Pnap_3723 3964844 - 3964419 - | hypothetical protein Pnap_3724 3965172 - 3966116 + | ISXo7 transposase Pnap_3725 3966787 - 3966149 - | hypothetical protein Pnap_3726 3967045 - 3968538 + | methyltransferase type 12 TERM 4764 3968876 - 3968897 + G 73 -2.9 -4.74801 | CTTCGTGGGCTTGAC GTTTGCGCT CAGC GGCGTAGGC TTTTTCCTGCCCTTG Pnap_3727 3968535 - 3969872 + | integral membrane sensor signal transduction histidine kinase TERM 4765 3970191 - 3970180 - g 76 -5.8 -4.59773 | overlap 3970182 3970183 GCCTACGCCGAAAAA GACG TCGC CGTC GCCGCGATCAACCAG TERM 4766 3970318 - 3970287 - g 71 -13.6 -2.64274 | overlap 3970284 3970283 AGCCCTGGAAACCCA CCGCCAGCGCGAGC ACGA GCGCGCGCTGGCCA GCAACCGGGCGGCCG TERM 4767 3970492 - 3970476 - g 72 -7.9 -4.10657 | GCACATTGCCGAAAA GCGCGCC GGC GACACGC TCGCGATGATCCAGG Pnap_3728 3969886 - 3971073 + | response regulator receiver sensor signal transduction histidine kinase TERM 4768 3971503 - 3971487 - g 83 -12.3 -4.07568 | opp_overlap 3971487 TCTTGCGCGCGAAAA GCTGCTG GTG CAGCAGC AGCAGCTTCTGGGCA TERM 4769 3971487 - 3971509 + G 72 -12 -3.28712 | opp_overlap 3971487 TCTTGCGCGCGAAAA GCTGCTGGTG CAG CAGCAGCAGC TTCTGGGCAGCCGCC TERM 4770 3971976 - 3971946 - g 78 -10.4 -4.00756 | gap 1, overlap 3971968 GACCGCAGGAAACAA GGCCGGCGGCTGG ACGCTA CAAGCC-CCGGCC GGCGGTGCCGCCGAG Pnap_3729 3971077 - 3972048 + | response regulator receiver protein Pnap_3730 3972567 - 3972052 - | hypothetical protein TERM 4771 3972618 - 3972604 - H 74 -4.2 -4.74103 | overlap 3972605 TTGTTAAGGCAAAAA GGCG GCGACAG CGCC TGCGAACTTATACCA TERM 4772 3972763 - 3972774 + G 83 -7.2 -4.55887 | overlap 3972762 CCCGGCTTTCTCCTT GCGC CCAC GCGC TTTGTGTTTTTCACC Pnap_3731 3972724 - 3974526 + | arsenite-activated ATPase ArsA TERM 4773 3975199 - 3975162 - g 72 -7.5 -4.14739 | gap 1, opp_overlap 3975166, overlap 3975166 GCAGTTACGTGAAAA GCCAGGCCTGCCCCGAGC CTT GATCGGG-CTGGCCGCGC GCCTGCCCTGGTGGC TERM 4774 3975295 - 3975271 - g 72 -4.2 -4.57073 | gap 1, opp_overlap 3975275 3975280, overlap 3975272 3975275 CATCTGGCGCAAAAA CCGA-TGCCGG CGGC CCTGCAGCCGG GGCAGATGGGCAGCT TERM 4775 3975280 - 3975309 + G 78 -4.7 -4.8048 | opp_overlap 3975271 3975275 3975272, overlap 3975275 CAAAAACCGATGCCG GCGGCCCTGCAGC CGGG GCAGATGGGCAGC TTTTTGCTGTCGGCG Pnap_3732 3975145 - 3975963 + | restriction endonuclease Pnap_3733 3976150 - 3976341 + | 4-oxalocrotonate tautomerase TERM 4776 3976519 - 3976548 + G 84 -13.5 -3.76402 | opp_overlap 3976512 CGACAGCAGCGTGGA TGGCGCCGGCCAT GACA AGGGCCTGCGCCA TTTCGTCGATCACCT Pnap_3734 3976376 - 3977173 + | glutamine amidotransferase, class-II TERM 4777 3978113 - 3978131 + G 82 -5.9 -4.8622 | TCGTGCCCCGGCTCG CCGCCCA GGGCG TGGACGG TTTTTACTTCGACAA TERM 4778 3978576 - 3978599 + G 75 -3.8 -4.7373 | gap 1 CTCCAGCGCGGGACA GCAGACC-GTG TGT TACTGGCCTGC TTTTTAATCGGCTGA Pnap_3735 3977368 - 3978606 + | hypothetical protein Pnap_3736 3979579 - 3978626 - | glutathione synthetase TERM 4779 3979356 - 3979333 - G 71 -11 -3.40403 | overlap 3979334 CTTTGCGCATCAGAA CGGCGCCGAA TTCC TTCAGCGCCA CCGCGCGCGTTCCGG TERM 4780 3979702 - 3979667 - H 75 -11.1 -3.34517 | gap 2, opp_overlap 3979677, overlap 3979665 ATTGTTGTCCAAACA GCGCCAGCGC-GC-CGG CCAG CCGCGCCGCGCCCGCGC CACCCTGCCCGGCTT TERM 4781 3979677 - 3979715 + H 78 -6.5 -4.56597 | gap 1, opp_overlap 3979667 3979665 AAACAGCGCCAGCGC GCCGGCCAGCCGCGCCGC GCCC GCGCCACC-CTGCCCGGC TTTTTCAACCAGGGC TERM 4782 3980431 - 3980402 - g 73 -8.5 -4.01454 | gap 1, overlap 3980414 GGAAAAACAAGACAA GCAGCGCGAACAGG CCG CCAGCTC-CGCCGC GCCCAGCGCCGCCGC TERM 4783 3980712 - 3980677 - g 77 -2.5 -5.00884 | overlap 3980678 ACTGGCCCGAAAAAA CGCTGCGCCAACT-CGG CATG CTGCAGCTGGC-CTGCG AAGCCGTGACGCGGC TERM 4784 3980989 - 3981005 + G 70 -7.9 -4.07568 | opp_overlap 3980968, overlap 3980990 TCTGCGGTGCAGCGC AGCCAGC CGC GCTGGCG TTTTACCCCAGCGCC Pnap_3737 3980043 - 3981428 + | zinc finger SWIM domain-containing protein TERM 4785 3981772 - 3981728 - g 75 -11.9 -3.59979 | overlap 3981706 3981705 GCGCTGCACGCCAAA GGCCTGCAGCTCAGCCTGCGC TGG GCGCTGGCCGAAGCGCCGCCC CGGCTGCAGATTGAA TERM 4786 3982341 - 3982329 - g 71 -5.5 -4.35524 | overlap 3982322 3982330 3982333 GCGCGAAATGGAAAA TCCAG GCC CCGGA GGCCGCCGGCGACGA TERM 4787 3982566 - 3982591 + G 71 -8.1 -3.86346 | opp_overlap 3982528, overlap 3982567 ACGTGCTGCGCACCG CGCCCGACGCC GCCT GGTGCCGGGCA TTTCTGGACCACTGG Pnap_3738 3981425 - 3983011 + | hypothetical protein Pnap_3739 3983014 - 3984111 + | ATPase TERM 4788 3984603 - 3984584 - g 70 -7.8 -4.10161 | gap 1, overlap 3984585 CAGCACCGTTGAAAA CGCCG-CCG AGG CGGCCGACG CCAGCGCCGCCGTCC TERM 4789 3985851 - 3985826 - g 78 -10.3 -4.09685 | overlap 3985827 CCGCATCTTGGAAAA CCGCGCCGCCG TCAG CGGCGACACGC TACAGCTCCTCGAAG TERM 4790 3985850 - 3985827 - g 75 -13.8 -3.05597 | overlap 3985826 CGCATCTTGGAAAAC CGCGCCGCCG TCAG CGGCGACACG CTACAGCTCCTCGAA TERM 4791 3986497 - 3986516 + G 74 -4.9 -4.59511 | opp_overlap 3986496 3986497, overlap 3986496 3986498 GCTGGGATGAGGAAC TGGCGGC TTTGCC GCTGCCG TTTTTGAGGACTATT Pnap_3740 3984108 - 3986549 + | hypothetical protein Pnap_3741 3986657 - 3987010 + | hypothetical protein TERM 4792 3987794 - 3987784 - g 78 -6.8 -4.56597 | overlap 3987786 3987793 GGCGCTGCTGAAAAA GCTC GAA GAGC CGATGCGCTCGGCGG TERM 4793 3988376 - 3988353 - g 71 -13.8 -2.50816 | opp_overlap 3988313 3988340 3988352 3988369, overlap 3988352 CGCTGAGCGACGAAG GCGCGCCGTC TTAT GACCGCGCGC TGGCGGCCAAGCTGG TERM 4794 3988400 - 3988432 + G 70 -9.8 -3.64682 | gap 1, overlap 3988369 3988394 3988423 3988424 AAGCTGGCCGCGCTG GGCGTGCCGTCGTTC GCCT GCACGCCGG-ACGCC TTTCCGGGTTTGATG Pnap_3742 3987311 - 3988522 + | VWA containing CoxE family protein TERM 4795 3988568 - 3988547 - f 86 -7.3 -4.69027 | AAATTTATGGAAAAA GTGCCTCTT GCGC AATAGGCAC GGGCATAGCCAGCTA TERM 4796 3989063 - 3989077 + G 78 -3.4 -5.09225 | overlap 3989061 AGGGCGCGGCCAGTC GCGACG AGG CGATGC TTTTTTACGTGGGCT Pnap_3743 3988633 - 3989094 + | hypothetical protein Pnap_3744 3989113 - 3989757 + | FMN-binding negative transcriptional regulator Pnap_3745 3990381 - 3989770 - | response regulator receiver protein Pnap_3746 3992384 - 3990405 - | multi-sensor signal transduction histidine kinase TERM 4797 3992041 - 3992014 - G 71 -12.6 -3.03124 | opp_overlap 3992016, overlap 3991995 GGCCAGGCGGCAACA GCGGGCTGCCGG TCCG CCGCCAGCCAGC CATGCCAGGCGATGG TERM 4798 3992527 - 3992516 - g 70 -7.2 -4.07568 | opp_overlap 3992489 3992487 GGCGGCGCCGCAAAA GGCG CCCG CGCC GGTGCTGATCCGCTT Pnap_3747 3992400 - 3993464 + | TRAP dicarboxylate transporter, DctP subunit TERM 4799 3993531 - 3993549 + F 73 -10.2 -3.32844 | opp_overlap 3993517 ACGCAGCGTTCCCGC CCAGCGGG CCG CCGGCTGG TTGTGCCCTGGAGAC TERM 4800 3993851 - 3993839 - g 80 -4.8 -4.87807 | overlap 3993840 3993850 GGAAGACATGAAAAA GGTC GGCAA GACC GGCGGCCTGGCGCTG TERM 4801 3993990 - 3994024 + G 100 -14.2 -4.4648 | opp_overlap 3993978 3993977, overlap 3993992 AAGTCCATCGCCGCC TACACCGCGCCCGGCA AGA TGCAGGGCACGGTGGA TTTTCTGCTCAACGT TERM 4802 3993992 - 3994022 + G 80 -16.8 -2.56122 | opp_overlap 3993978 3993977, overlap 3993990 GTCCATCGCCGCCTA CACCGCGCCCGGCA AGA TGCAGGGCACGGTG GATTTTCTGCTCAAC Pnap_3748 3993618 - 3994964 + | C4-dicarboxylate transporter DctA TERM 4803 3994991 - 3995023 + T 100 -19.1 -3.14132 | overlap 3994988 3994993 CACTGTCCTATCCGG CCGGGGCGGCCCCTT TCA AAGGGACCGCCCGGG TTGATGGCAAAAGGC TERM 4804 3995061 - 3995036 - T 100 -19.1 -4.13767 | opp_overlap 3995036 GGGTTGATGGCAAAA GGCCGGCATGA GTGA TCATGCCGGCC TTTTGCATTGACGTA TERM 4805 3995036 - 3995061 + T 100 -19.1 -4.2803 | opp_overlap 3995036 GGGTTGATGGCAAAA GGCCGGCATGA GTGA TCATGCCGGCC TTTTGCATTGACGTA Pnap_3749 3996954 - 3995086 - | K+ potassium transporter TERM 4806 3995272 - 3995284 + g 74 -2.6 -4.82667 | TGTCATGGGTTCGAG CTGG CAGCC CCGG TTTTTGATCTGCTGC TERM 4807 3995779 - 3995746 - G 91 -5.1 -5.31877 | gap 1, opp_overlap 3995746, overlap 3995748 ATCGACGAGAAAAAA CACGCTGGTGGCG-GC AAT GCACAGCGCCAGCGGG TACTTCCAGCCATAG TERM 4808 3995777 - 3995748 - G 73 -6.3 -4.29153 | gap 1, opp_overlap 3995746, overlap 3995746 CGACGAGAAAAAACA CGCTGGTGGCG-GC AAT GCACAGCGCCAGCG GGTACTTCCAGCCAT TERM 4809 3996913 - 3996903 - G 71 -8.2 -3.90744 | TGTCGCCGTAAACAA CGCC GAT GGCG CCCACGGTCAGCACG TERM 4810 3996921 - 3996939 + g 73 -3.1 -4.78149 | CGATGGCGCCCACGG TCAGCAC GGCAA GTGATGA TTTTTGACTTGTCAC Pnap_3750 3998565 - 3997270 - | glutamate--cysteine ligase TERM 4811 3997447 - 3997426 - G 73 -8.7 -4.07568 | opp_overlap 3997419 CCCGCTGTCTGAAAA GGCCAGC GGCTCGAA GCTGGCC CCGGGCGCGTTCAGG TERM 4812 3998749 - 3998772 + r 77 -8.1 -4.09511 | gap 1, overlap 3998750 CACCCAGCGGCTTTC TCGGC-CGGC ATCCC GCCGGGCCGG TTTTCAGCGCATCTT Pnap_3751 4000087 - 3998795 - | gamma-glutamyl phosphate reductase TERM 4813 3999277 - 3999260 - G 74 -4.7 -4.57073 | overlap 3999261 3999264 GATTTGCGGCAAAAA CGCATCG GCCA CGCCGCG TGCCACGAGCAGGCC TERM 4814 3999952 - 3999974 + g 73 -3.4 -4.69664 | gap 1, overlap 3999928 3999953 GCAGGCTTCCCAAGT TCTGG-CGC AGCAGG GCGGCCAGG TTTTTCAATGCTCTG Pnap_3752 4000652 - 4000110 - | hypothetical protein Pnap_3753 4001154 - 4000750 - | hypothetical protein TERM 4815 4001097 - 4001086 - G 71 -5.8 -4.32857 | overlap 4001088 CCCGGCAAACACAAA CAGC AGGC GCTG CGGCTCGGGCTGGGC TERM 4816 4001214 - 4001183 - R 79 -7.2 -4.37763 | gap 1, overlap 4001184 4001185 TCATGGAAAAAAAGA GGTGCCGGCAAAGGC GCG GCC-CTGCCGGCAAG AAAACTAAAAAACTG TERM 4817 4001213 - 4001184 - R 71 -10.7 -3.21573 | gap 1, overlap 4001183 4001185 CATGGAAAAAAAGAG GTGCCGGCAAAGGC GCG GCC-CTGCCGGCAA GAAAACTAAAAAACT TERM 4818 4001212 - 4001185 - R 81 -14.2 -2.51859 | gap 1, overlap 4001184 4001183 ATGGAAAAAAAGAGG TGCCGGCAAAGGC GCG GCC-CTGCCGGCA AGAAAACTAAAAAAC TERM 4819 4001251 - 4001227 - R 100 -6.4 -5.52347 | gap 1, overlap 4001229 AAGAAAACTAAAAAA CTGTCGTGCCG CCAT CGGG-CGACAG GATGCTGACGTAATC Pnap_3754 4001881 - 4001219 - | nitroreductase TERM 4820 4001539 - 4001551 + g 73 -3.3 -4.72986 | opp_overlap 4001538, overlap 4001524 CCAGCATGAGCAACG GCGCA CGG TGGGC TTTTTCCTGCGCCTG Pnap_3755 4005486 - 4001932 - | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 4821 4001964 - 4002018 + g 72 -8 -4.15222 | gap 3, opp_overlap 4001972 GGTGGCCGCACTGGG TGCAGT-AATCGCAGCCGTCCTTGCGG ATCA CCGCATGGGCGCC-GC-ATTCGCTGCA TTTCTTGCCGGCCAT TERM 4822 4002069 - 4002119 + g 73 -11 -3.63922 | gap 1, overlap 4002067 4002071 AGGCGACCTGCACGG GC-TCGGCCGGCGCCAGGCTCAG GGCCGA CTGGGCCGCGCGCCGGGCGATGA TATTTTGCACCGCGT TERM 4823 4002071 - 4002116 + g 90 -18.2 -2.93623 | overlap 4002069 4002067 GCGACCTGCACGGGC TCGGCCGGCGCCAGGCTCAG GGCCGA CTGGGCCGCGCGCCGGGCGA TGATATTTTGCACCG TERM 4824 4002162 - 4002189 + g 72 -2.7 -4.7497 | gap 2, overlap 4002166 4002166 CCACCTCGGAGTCGT GCCACAGCGGCAC GCGC GTGCCG-TC-GGC TTTTTCGTAGGTGCC TERM 4825 4002852 - 4002886 + g 72 -2.6 -4.6902 | overlap 4002840 4002853 4002883 AGGCGTGGTCCTCGA CCGCGTATTCGGTGGT GCT GCCGTCGGACTCGCGC TTTTTGCGCTTGTAC Pnap_3756 4006469 - 4005777 - | carbonate dehydratase TERM 4826 4006005 - 4006058 + g 83 -15.4 -3.14211 | gap 3 CTGCAGCACCACCGA GCGCTGCT--CGGTGCGGCGCAGCGCC TCG GG-GCTGGGCTGCACCGGCAGCAGGGC TTCCTGCACCAGCCT Pnap_3757 4007314 - 4006466 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 4827 4006946 - 4006936 - G 80 -5.4 -4.88918 | overlap 4006937 TGACGGCAAACAAAA TGTG CCG CACA TGCAGCGCCTGGCCG Pnap_3758 4008105 - 4007311 - | respiratory nitrate reductase, gamma subunit TERM 4828 4007577 - 4007564 - G 76 -5.9 -4.66938 | ATCTTGAAGACAAAA CCGGC TTCG GCCAG CATCTCGGGCGCACC Pnap_3759 4008809 - 4008102 - | nitrate reductase molybdenum cofactor assembly chaperone TERM 4829 4008653 - 4008680 + g 78 -6.8 -4.59773 | CGATCAGCGCGTCGA GTTCGGCCAGCC GCTG GGCCGGCAGGGC TTTTTCGCCGTGCAG Pnap_3760 4010345 - 4008813 - | nitrate reductase, beta subunit Pnap_3761 4014172 - 4010342 - | nitrate reductase, alpha subunit TERM 4830 4010944 - 4010930 - G 70 -10 -3.55563 | ACGGTAGCTGGCAAA GCCTTC GCC GAAGGC CAGCATCCACGGGTG TERM 4831 4012327 - 4012355 + g 71 -5.9 -4.25104 | gap 1 CGAGCGCGAAGGCCA GCGGCGTCCAGC CGGTCT GC-GGGCGCAGC TTTTCCTGGCCCACG Pnap_3762 4015884 - 4014217 - | nitrate/nitrite antiporter TERM 4832 4015107 - 4015085 - G 88 -17 -3.04322 | opp_overlap 4015077 4015092, overlap 4015061 GCGAACGCGGCAAGA GTGCCGCCCG TGT CGGGCGACAC GGTCTTGAGGTTGCT Pnap_3763 4017166 - 4015913 - | major facilitator superfamily transporter TERM 4833 4016417 - 4016405 - G 71 -4.7 -4.4078 | overlap 4016406 4016408 4016409 GCCGGGCAATGAAAA GCAGG CCG CCAGC AGCGCGGCGGTGCGG Pnap_3764 4018048 - 4017350 - | two component LuxR family transcriptional regulator TERM 4834 4017623 - 4017594 - G 71 -12.7 -3.01712 | opp_overlap 4017622 GCTGCGCCGGGAATA GCCGGCGCTGGCA GCGC CGCCGGGGCCGGC TTGCCGCGAAAGGCC Pnap_3765 4020115 - 4018199 - | multi-sensor signal transduction histidine kinase TERM 4835 4018875 - 4018896 + g 76 -12.9 -3.53444 | opp_overlap 4018843, overlap 4018892 4018892 4018895 ACGGCGGCTTCGCGG GCCAGCGCG GCGG CGCGCAGGC TTTCCAGCGCGCTCG TERM 4836 4020205 - 4020226 + H 75 -13.1 -2.63715 | opp_overlap 4020198 GGCGGAAATCGCATG GGGATTGCA CGCA TGCAATCCC TGGTCTGGCATGGAT Pnap_3766 4020475 - 4020720 + | hypothetical protein TERM 4837 4020774 - 4020753 - T 78 -13.7 -2.52795 | gap 1, opp_overlap 4020745 AACCGTTTGAATTCA CCGG-CCGCC GAA GGCGGTCCGG TGGAATGATGAGTTG Pnap_3767 4021591 - 4020794 - | hypothetical protein Pnap_3768 4021683 - 4021886 + | integrase holA 4023256 - 4022153 - | DNA polymerase III subunit delta Pnap_3770 4023705 - 4023280 - | AsnC family transcriptional regulator Pnap_3771 4023833 - 4024930 + | ornithine cyclodeaminase Pnap_3772 4024973 - 4025890 + | arginase Pnap_3773 4026581 - 4025904 - | hypothetical protein Pnap_3774 4027997 - 4026591 - | coproporphyrinogen III oxidase TERM 4838 4027406 - 4027394 - G 91 -4.8 -5.30155 | CCATCAATGAAAAAA CCTG TTCGG CAGG CTGAACGCGATGCAC TERM 4839 4027501 - 4027476 - G 70 -10.3 -3.54424 | GCTCAGCCGGTTAAA GCCCAGCCCCG CCAG CGCGGCCAGGC GGGCGGAATCAACAG TERM 4840 4028645 - 4028658 + G 73 -6.7 -4.25104 | opp_overlap 4028636, overlap 4028635 CGAAATCGTGCGCGA GCATG GTGT CATGC TTTTGCTGGGCAGCA Pnap_3775 4028139 - 4028936 + | CRP/FNR family transcriptional regulator Pnap_3776 4029263 - 4029000 - | hypothetical protein Pnap_3777 4029575 - 4029315 - | hypothetical protein Pnap_3778 4031056 - 4029590 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 4841 4030424 - 4030406 - G 74 -6 -4.4715 | GGCGAATCCATAAAA GAAAACCC AAA AGGTTTCC CATGGCCCCATGCCT TERM 4842 4030890 - 4030864 - G 83 -7.2 -4.61482 | overlap 4030866 4030882 GTCCGTAAAAAACAA GTTGGGTGATGA ATA CCATCGCCCAGC GCCACTTCGAAAACA TERM 4843 4031076 - 4031089 + r 74 -9.5 -3.76224 | opp_overlap 4031076 ACTGCTCCATGCAAA GCCCC AGTA GGGGC TTTGCTGGGTAAAAA TERM 4844 4031089 - 4031076 - R 74 -9.5 -3.64822 | opp_overlap 4031076 ACTGCTCCATGCAAA GCCCC AGTA GGGGC TTTGCTGGGTAAAAA Pnap_3779 4032025 - 4031105 - | cytochrome c oxidase, cbb3-type, subunit III Pnap_3780 4032205 - 4032059 - | Cbb3-type cytochrome oxidase component TERM 4845 4032147 - 4032102 - G 73 -8.3 -4.07568 | gap 1, overlap 4032103 GCCGCCTCTTCAAAA CTTTTGGCATTGCGGC-CGGAC CAG GCCCATGCCACGATGCCAATAA ATACGAAAAAAGTGG Pnap_3781 4032847 - 4032221 - | cytochrome c oxidase, cbb3-type, subunit II Pnap_3782 4034297 - 4032861 - | cytochrome c oxidase, cbb3-type, subunit I TERM 4846 4033573 - 4033550 - G 73 -3 -4.67755 | overlap 4033554 ACATGTAGGTAAAAA TCAACGCCCA GAAA TGGACGATGG ACAGGCGATAGGAGT TERM 4847 4034046 - 4034028 - G 100 -14.6 -4.17048 | CTTGTCGGAAAACAA GCGCACCT GGC AGGTGCGC TGCACGACGTAAAGC TERM 4848 4034369 - 4034352 - R 90 -8.5 -4.7878 | TAGTTACAAAACAAA GATTGAC GTGA GTCAATC ATCGCGAAGAATGCG Pnap_3783 4034504 - 4034364 - | cytochrome oxidase maturation protein, cbb3-type Pnap_3784 4036828 - 4034501 - | heavy metal translocating P-type ATPase TERM 4849 4035151 - 4035137 - G 79 -9.2 -4.1721 | AGCCACATCGCAAAA CCGGGC CGA GCCCAG TCGCGCCATGACGGC TERM 4850 4036289 - 4036266 - G 77 -2.3 -5.02074 | gap 1, overlap 4036282 GCATTGCGGAAAAAA GGCGC-GCAG GAAAA CAGCAGCACC GGCAGCGAAAGCACC Pnap_3785 4037467 - 4036952 - | rare lipoprotein B Pnap_3786 4040158 - 4037492 - | leucyl-tRNA synthetase TERM 4851 4038170 - 4038187 + g 73 -3.3 -4.69664 | overlap 4038172 CATGGTGTACAGGCG CGCGGTG TCGG CACCGTA TTTTTCAATGATGTC TERM 4852 4038172 - 4038185 + g 71 -8.1 -3.95883 | overlap 4038170 TGGTGTACAGGCGCG CGGTG TCGG CACCG TATTTTTCAATGATG TERM 4853 4039212 - 4039229 + g 80 -4.7 -4.9218 | opp_overlap 4039211 4039213, overlap 4039213 GGATGCGTGACGAAC AGGCCGG TAGG CTGGCCC TTTTTCTCCTGCGTG TERM 4854 4040177 - 4040165 - R 76 -5.5 -4.72272 | GTCTTGCATGAAAAA TCCGG ATA CCGAA AAAAGAACCCCGGCG TERM 4855 4040200 - 4040182 - R 74 -2.2 -5.1287 | overlap 4040185 4040187 CGGATACCGAAAAAA GAACCCCG GCG CGGGGCGG GCAGCCTAGCGCTGC TERM 4856 4040197 - 4040185 - R 95 -10.5 -4.65666 | overlap 4040182 4040187 ATACCGAAAAAAGAA CCCCG GCG CGGGG CGGGCAGCCTAGCGC Pnap_3787 4040700 - 4040254 - | biopolymer transport protein ExbD/TolR TERM 4857 4040289 - 4040328 + g 83 -7.8 -4.56597 | gap 1, overlap 4040292 CCAATGCGGCGGCTG GCGCGGGCTCGGCGACA AAACCGA TGCGGCTGAGCCCG-GC TTTTTGCGCCACGCC Pnap_3788 4041410 - 4040697 - | MotA/TolQ/ExbB proton channel Pnap_3789 4042233 - 4041418 - | dihydrodipicolinate reductase Pnap_3790 4042859 - 4042245 - | SmpA/OmlA domain-containing protein TERM 4858 4043031 - 4042987 - g 70 -11.6 -3.17075 | gap 1 CCGGCCTGAAGGCAA CCTTGCCACGCCTGAAAATTC TGGA GATTTTTCAGG-GCGGCAAGC AACGCCACATGACGG Pnap_3791 4042938 - 4043396 + | ferric uptake regulator family protein Pnap_3792 4044438 - 4043488 - | HPr kinase/phosphorylase Pnap_3793 4044940 - 4044467 - | PTS IIA-like nitrogen-regulatory protein PtsN TERM 4859 4045027 - 4045006 - R 100 -14.5 -5.83822 | overlap 4044995 GACAGGCAAAAAAAA GCCGTTTGC CATT GCAAACGGC CTGGCATGCAACCCT Pnap_3794 4045480 - 4045148 - | sigma 54 modulation protein/ribosomal protein S30EA TERM 4860 4045824 - 4045849 + H 86 -9.7 -4.35524 | opp_overlap 4045823 CGTGCGGTCAAAATT CTTCCGTCCAT TTTC ATGGGCGGCAG TTTTCGCTTTCACGG TERM 4861 4046670 - 4046651 - g 83 -7.8 -4.59773 | overlap 4046653 GTCGATCTTGAAAAA GTCAGCAC CAAG GTGCTGTC GGGCGATGTGACCGA Pnap_3795 4046126 - 4047136 + | magnesium and cobalt transport protein CorA Pnap_3796 4047974 - 4047198 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 4862 4047493 - 4047542 + g 74 -14.4 -2.52834 | gap 2, opp_overlap 4047498 4047510, overlap 4047485 4047492 4047510 ATCAGGCCCTGGTGA ACGCAGGCGTCATGAAAGCCGTGG GTCG CCA-GGCTTTCGTG-CGCCAGCGC CTTGCTACTCGCCTC TERM 4863 4048042 - 4048025 - R 80 -4.7 -5.0133 | overlap 4048026 GAGCCGCTCAAAAAA TGGCGAC CTGC GCCGCCC CCGAAAAACCGTGCA Pnap_3797 4049763 - 4048063 - | AMP-dependent synthetase and ligase TERM 4864 4049858 - 4049877 + r 80 -10.8 -3.82097 | opp_overlap 4049853 4049858 AGAAATTCAAGGCAA TCAGAGAG AAAG CTCTCTGA TTTAGTCACTTTAGC TERM 4865 4049877 - 4049858 - R 71 -10.8 -3.2285 | opp_overlap 4049858, overlap 4049853 AGAAATTCAAGGCAA TCAGAGAG AAAG CTCTCTGA TTTAGTCACTTTAGC Pnap_3798 4051349 - 4049925 - | NAD(P) transhydrogenase, beta subunit Pnap_3799 4051681 - 4051346 - | NAD(P) transhydrogenase, subunit alpha part 2 Pnap_3800 4052902 - 4051787 - | NAD(P)(+) transhydrogenase (AB-specific) TERM 4866 4053098 - 4053068 - R 100 -12.6 -5.60993 | TTCCCCATAAAAAAA GCCCCATCAATCTG TAA CAGACGAATGGGGC CAGCAAGAAAAATGC TERM 4867 4053121 - 4053111 - R 74 -2.4 -5.1356 | GGCCAGCAAGAAAAA TGCC AGT GGCT GCGGCTTGGCCGCAT TERM 4868 4053121 - 4053135 + r 75 -11.4 -3.36823 | overlap 4053131 AAAAATGCCAGTGGC TGCGGC TTG GCCGCA TTGCGTTTTGGCGAG Pnap_3801 4054690 - 4053155 - | methylmalonate-semialdehyde dehydrogenase TERM 4869 4053919 - 4053954 + g 81 -12.5 -3.7829 | gap 1 GGTTCTTGGCGCCGC CCAGCGCCTGCACGCG CTTGC CGTG-GCGGGCGCCGG TTTCATAGATGTAGT TERM 4870 4055115 - 4055161 + G 73 -11.5 -3.62522 | gap 2 TGATCCGGCTGACGG CGCCGGTCGCGCTGGGGCGCCAG CAT CTGGCGCCGT-GCATGGCCG-CG TTCTTGCAGCAATTC TERM 4871 4055631 - 4055661 + G 86 -6.7 -5.00616 | overlap 4055618 4055632 GACCTGCGCCGCTGG TCCAGGTCTTGCC CGACT GGCAGGTCCAGGG TTTTTTCGGCGAGCG Pnap_3802 4054805 - 4055800 + | LysR family transcriptional regulator TERM 4872 4056254 - 4056290 + G 76 -8.5 -4.13945 | opp_overlap 4056273, overlap 4056255 ACCGCAGCCCGCTGC TGCTGACCAGCCTGGAA GAC TACCTGGCCGGGCAGCG TTTTCCGCTCGACGT Pnap_3803 4055815 - 4056342 + | NUDIX hydrolase Pnap_3804 4056654 - 4056394 - | hypothetical protein TERM 4873 4056797 - 4056820 + G 100 -5.9 -5.75342 | gap 1, opp_overlap 4056783 4056782 CCCTGCGTGCTGATG CGCGCCG-GC ACCTC GCGCGGCCCG TTTTTTTTGCGCGAA TERM 4874 4057063 - 4057075 + G 70 -10.5 -3.66178 | CGGCAACATGCTGTC CGGCG TCG CGCCG TTTGCGATTGAGCAA TERM 4875 4057218 - 4057244 + G 71 -11.4 -3.42574 | opp_overlap 4057202, overlap 4057219 GCGATGCCCGGATTG ACGGCGTGGCCG GCA CCGCCGCGCCGA TTCTGCTGAACTTCC TERM 4876 4057219 - 4057243 + G 74 -14.9 -2.65223 | opp_overlap 4057202, overlap 4057218 CGATGCCCGGATTGA CGGCGTGGCCG GCA CCGCCGCGCCG ATTCTGCTGAACTTC Pnap_3805 4056671 - 4058794 + | hypothetical protein Pnap_3806 4059732 - 4058809 - | LysR family transcriptional regulator TERM 4877 4059441 - 4059406 - G 74 -4.6 -4.59109 | gap 1, overlap 4059409 4059411 CACACTCGGTAAAAA GTACAGGGCGGCCGACG GCA CGCAGGCCACCGT-CAC GCGCCCGCCCCGGTG TERM 4878 4060006 - 4059991 - g 73 -3.2 -4.72272 | overlap 4059993 4059994 4059996 CTGGCCCACCAAAAA CATCAC CATC GTGGTG CCCACGGCCGCCGGC Pnap_3807 4059845 - 4060870 + | hypothetical protein TERM 4879 4061034 - 4061058 + G 72 -4.1 -4.59773 | overlap 4061028 4061037 TCCCGGCACGCCGCT GCCCAGCCTGT GGC ACTGGCTGTAC TTTTTGCCGATCCAC TERM 4880 4061263 - 4061242 - g 88 -7.9 -4.87291 | opp_overlap 4061242 GAGGTGAAGGAAAAA TCGGGCCGC ACCG GCAGCCTGA TTTTTGTGAAAGTGC TERM 4881 4061242 - 4061263 + G 88 -7.9 -4.84359 | opp_overlap 4061242 GAGGTGAAGGAAAAA TCGGGCCGC ACCG GCAGCCTGA TTTTTGTGAAAGTGC Pnap_3808 4060897 - 4061754 + | hypothetical protein TERM 4882 4061927 - 4061945 + G 76 -10.2 -3.83026 | GCTATGACGAGCGCG TGCGCGGC CTG GCCTCGCA TTTCGTCTGGACCAA TERM 4883 4061995 - 4061975 - g 74 -9.7 -3.90291 | ACCGCTCCAAGGAAA GCCTCACGC TCG ACGTGAAGC ATGAAGAAGCGCAGA TERM 4884 4062067 - 4062089 + G 76 -9.1 -4.0162 | gap 1, opp_overlap 4062060 GTGCAAAACCTCGCG CCCGG-CGCG GCGG CGCGGCTGGG TTTGTCGTATGAGGC TERM 4885 4062193 - 4062183 - g 80 -4.6 -4.84359 | opp_overlap 4062183 CTACCGCGACAAAAA GGCC TAT GACC TCTTGATCCAGAGCG TERM 4886 4062567 - 4062556 - g 76 -5.8 -4.56775 | overlap 4062557 4062558 ATCTTTTGCGAAAAA CTGC TGCT GCAG CCCGAGCTGGCCACC Pnap_3809 4061776 - 4062957 + | L-carnitine dehydratase/bile acid-inducible protein F Pnap_3810 4062960 - 4063799 + | HpcH/HpaI aldolase TERM 4887 4064488 - 4064455 - g 77 -13.1 -3.64703 | overlap 4064440 4064478 CCGGCGCGATGGAAA CCCAGGCCGGGCTGA TGAA TGAACTCGGCCTGGG CCAGCCGCTGATCTC Pnap_3811 4063824 - 4065173 + | fumarate lyase Pnap_3812 4065219 - 4066301 + | porin Pnap_3813 4067306 - 4066329 - | hypothetical protein TERM 4888 4066818 - 4066853 + g 100 -12.6 -4.85782 | gap 1, opp_overlap 4066841, overlap 4066836 CAGGTGCGAGGCCGA CCCGGCGCCGCTGGA CGCGAAA TCCAG-GCCGCCGGG TTTCTTTTTGGCCAG TERM 4889 4066836 - 4066857 + g 76 -5.9 -4.56597 | gap 1, opp_overlap 4066841, overlap 4066818 GGCGCCGCTGGACGC GAAATCCAGG CCG CC-GGGTTTC TTTTTGGCCAGCGCC TERM 4890 4067118 - 4067138 + g 86 -6.8 -5.03314 | GTCCACGATCACCGT CTGGCCGA TGTTC TCGCCCAG TTTTTTGGCGATCAG TERM 4891 4067346 - 4067371 + r 83 -7.6 -4.57073 | gap 1, opp_overlap 4067339, overlap 4067346 4067347 AAAATTCAGTCGGCA C-CCAGCCCGA CGGGA TTGGGCTGGCG TTTTTCGACCGCATG Pnap_3814 4068520 - 4067336 - | CitB domain-containing protein Pnap_3815 4069916 - 4068507 - | tricarballylate dehydrogenase TERM 4892 4068867 - 4068853 - G 71 -5.6 -4.25283 | opp_overlap 4068854 4068855, overlap 4068854 AGCGTGTGATCAAAA GTGCCG ACC CGGCAG GCGGCGTTGTAGCCG Pnap_3816 4070932 - 4070000 - | LysR family transcriptional regulator TERM 4893 4070766 - 4070744 - G 76 -5.5 -4.56597 | gap 1 CGCTTCCCGGAAAAA TGCCAGCCCG GCCT CGGTC-GGCA CCACGCCCTTGCTGC TERM 4894 4071368 - 4071356 - g 78 -3.3 -5.00616 | overlap 4071357 TGGGCGCCGAAAAAA TCGCC ACC GGCCA CTACGCCAGAGTGCG TERM 4895 4071682 - 4071660 - g 83 -7.6 -4.56597 | GGGCCCGGTCAAAAA CGACCAGGGT CGC ATCCTGGGCG AACACGTCGGCCTGA trmU 4070983 - 4072167 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 4896 4072212 - 4072193 - T 84 -2.8 -5.36441 | TTTTTAGATAAAAAA TGCCGTTT GCGC ATACAGCA TCTGCCTAACCAGCT Pnap_3818 4073729 - 4072254 - | MltA-interacting MipA family protein TERM 4897 4073453 - 4073427 - G 84 -2.1 -5.28176 | GGCATGCAGAAAAAA CCGCTCGCCCT CATAC AGGTACAGCGG CAGGATGTCGTAGCG TERM 4898 4073829 - 4073815 - R 100 -8.5 -5.14965 | opp_overlap 4073815 AGGCTGATTAAAAAA CCCGC ACGAA GCGGG TTGTTGATGGGATTT Pnap_3819 4074386 - 4073859 - | single-strand binding protein TERM 4899 4073968 - 4074002 + g 73 -12.6 -3.14132 | CGTGGCGCAGGCGCT GCGGGGCGGCTGGCCG GTG CGGCCTGGCGCGGCGC TTCGTAGCCGCCGCC TERM 4900 4075234 - 4075281 + G 91 -9.6 -4.57569 | overlap 4075235 TGGGCTGGAACGCGC TGTTTCCGGGCCTGCTGGTGGC GCTG GCCTGCGGCGGGCTCGGCGGCG TTTTTGCACGGCTGC TERM 4901 4075520 - 4075548 + G 78 -10.1 -4.07568 | opp_overlap 4075507, overlap 4075521 CATCGCGACCTGGCT GGCCGCCTGGTGC GGC GTGCCCGGCGGCA TTTTCGCGCCCGCGC TERM 4902 4075521 - 4075547 + G 75 -13.6 -3.04398 | opp_overlap 4075507, overlap 4075520 ATCGCGACCTGGCTG GCCGCCTGGTGC GGC GTGCCCGGCGGC ATTTTCGCGCCCGCG TERM 4903 4075661 - 4075688 + G 70 -12 -3.23692 | gap 1 GGCCGCATTCCTGGC CGCCGTCACGCAG GCG CCGC-TGACGGCG TTCATCATCGTGATG Pnap_3820 4074516 - 4075880 + | Cl- channel, voltage-gated family protein Pnap_3821 4077087 - 4075885 - | major facilitator superfamily transporter TERM 4904 4076216 - 4076158 - G 100 -11.4 -5.49809 | overlap 4076160 4076161 4076163 GAAACTGCAAAAAAA CAGCAGCAGCAAGCCGCCCAGCACCGCC AGC GACGGCGCCGCGCCGCCGGCCGCCAGCG CGACCCCCAGGAAAC TERM 4905 4076215 - 4076160 - G 100 -13.8 -4.36993 | gap 1, overlap 4076158 4076161 4076163 AACTGCAAAAAAACA GC-AGCAGCAAGCCGCCCAGCACCGCC AGC GACGGCGCCGCGCCGCCGGCCGCCAGC GCGACCCCCAGGAAA TERM 4906 4076213 - 4076161 - G 76 -13.9 -3.20569 | overlap 4076160 4076158 4076163 ACTGCAAAAAAACAG CAGCAGCAAGCCGCCCAGCACCGCC AGC GACGGCGCCGCGCCGCCGGCCGCCA GCGCGACCCCCAGGA TERM 4907 4076211 - 4076163 - G 86 -16.5 -3.15047 | overlap 4076161 4076160 4076158 TGCAAAAAAACAGCA GCAGCAAGCCGCCCAGCACCGCC AGC GACGGCGCCGCGCCGCCGGCCGC CAGCGCGACCCCCAG Pnap_3822 4078112 - 4077258 - | hypothetical protein TERM 4908 4077845 - 4077825 - G 71 -8.1 -3.85698 | overlap 4077812 4077827 4077830 CTCCTGCCCGATAAA CAGCAGGCC CCA GGCCAGCGG GCCGGCCAGCTCGAT Pnap_3823 4078466 - 4078125 - | hypothetical protein TERM 4909 4078209 - 4078227 + g 74 -5.2 -4.63527 | overlap 4078198 4078211 GGCCTCGGCACGGCC GGTTTGCG TGC CGCAGAGC TTTTTCACCTGCTCG TERM 4910 4078444 - 4078460 + g 74 -9.4 -3.84246 | opp_overlap 4078433 4078431 AACAGCAGGCCGCCC GCCAGG AGGTG CCTGGC TTTCATGGTTGGCGG Pnap_3824 4078744 - 4078463 - | hypothetical protein TERM 4911 4079256 - 4079311 + G 86 -13.1 -4.08767 | gap 1 CGCGAACTGGTGGCG CGCATCCGGGCGCTGGCGCGC-CGGG GCCAA TCCGCGCGCCGCAGCACCCAGCTGCG TTTTAACGGCCTGAG TERM 4912 4079547 - 4079528 - g 91 -9.2 -4.56597 | CCGGCTGCGCAAAAA GCTGGCCG CAGC CGGCGAGC GCGAGTGGATCGAGA Pnap_3825 4078842 - 4079609 + | two component transcriptional regulator TERM 4913 4080716 - 4080754 + G 81 -3.7 -5.00616 | overlap 4080717 CGCGACCACGGCGCG GGCATTGCGCCGGGC CAGATGGAC GCCTTGCGCAAGGCA TTTTTTCGCGGCAGC Pnap_3826 4079606 - 4080913 + | integral membrane sensor signal transduction histidine kinase TERM 4914 4082320 - 4082350 + G 78 -4.7 -4.72272 | gap 2, opp_overlap 4082276 4082277, overlap 4082295 CCCCGACTGCCGCGG CACGCGGCTGCGGCT GGA AGC-GC-GCCATGTG TTTTTGGTCGGCACG TERM 4915 4083036 - 4082990 - g 85 -9.8 -4.26881 | overlap 4082986 4082991 TTCGACAAAACCAAA TCGCGCTTTGCGCCCAGCCCGG CGG CCGAGCGCCGCGCGGCGCGCGA AGCCATCCACCAGGC TERM 4916 4083414 - 4083424 + G 84 -8.2 -4.41494 | opp_overlap 4083393 GCGAACGCGGCTATG GCGC CGG GCGC TTTTCCTTCAACGTC Pnap_3827 4080983 - 4084057 + | excinuclease ABC, A subunit TERM 4917 4084162 - 4084175 + G 71 -5.9 -4.35742 | CACTTCCATTTTCAC CCGCC GCAA GGTGG TTTTCCTCGTTGCCT TERM 4918 4084571 - 4084534 - g 82 -6.2 -4.87665 | gap 1, overlap 4084535 4084537 4084538 CTGGATTTATAAAAA TGA-CCGGCTCAGCGCC AACAA GGCGCTGGGCTGCCTCA TCGGATTTGCCGGCG TERM 4919 4084853 - 4084880 + G 76 -7.6 -4.26903 | TACCTGGTGGTGCTG TCGTCCGCCGCG TTTG CGCTCTGGACGA TTTTGCTCAAGTACA TERM 4920 4085008 - 4084996 - g 74 -4.7 -4.62069 | opp_overlap 4085000 CCTGGAGTGGAAAAA CGGCG TGG CGCTG CTGCTGGTGTGCCTG Pnap_3828 4084139 - 4085074 + | hypothetical protein TERM 4921 4085067 - 4085054 - f 77 -3.7 -5.11063 | overlap 4085055 ACCAGGGAAGAAAAA CCGGC GCTG GCCGT GGCGTGAGGCCGTGC TERM 4922 4086177 - 4086160 - g 76 -5.5 -4.56597 | CTGCTGCTCGAAAAA GGCGACA TCGA CATCGCC CGCAACCTGAGCCCG TERM 4923 4086804 - 4086792 - g 78 -4.7 -4.7373 | TGAGCTGACCAAAAA GTCGG ACG CCGCC GTGCTGGAGCGCGAC Pnap_3829 4085284 - 4086993 + | extracellular solute-binding protein Pnap_3830 4087011 - 4088105 + | binding-protein-dependent transport systems inner membrane component TERM 4924 4088444 - 4088496 + G 91 -17 -3.28791 | gap 2 CTGTTCGTGGTGGTG CTGGTCGCCGTGCTGGCC-GC-GCCC ATC GGGCTGCTGGTCGGCACCGTGGCCGG TTATGCGGGCGGGCT TERM 4925 4088928 - 4088951 + G 76 -8 -4.30576 | overlap 4088927 4088926 4088937 TGGACCAGTGGTGGG TCGCGGCGGC GCCC GGCGCGGCGA TTTTCATCGTCAGCC Pnap_3831 4088102 - 4089028 + | binding-protein-dependent transport systems inner membrane component TERM 4926 4089291 - 4089277 - g 71 -11.4 -3.53343 | overlap 4089280 AATTGCCCGCCGAAA CAGCGC CGT GCGCTG CGCGGCGGACGCATC TERM 4927 4089435 - 4089421 - g 78 -3.5 -5.0538 | gap 1, opp_overlap 4089424, overlap 4089422 4089423 CGCGAGGCGAAAAAA CG-CGC GCTG GCGGCG CTTGAATCGGTGCGC Pnap_3832 4089025 - 4089867 + | ABC transporter related TERM 4928 4090101 - 4090082 - g 73 -6.4 -4.25104 | gap 1, opp_overlap 4090083, overlap 4090083 CGGCGGCGATGAAAA CCCTGC-GC CCG GCAGCAAGG CCTTCCGGCGCCGCG TERM 4929 4090238 - 4090222 - g 70 -10.1 -3.57792 | TCAGGGACGCGGAAA CGCGCAT CGA ACGCGCG CTCGATGAAGTCGGC Pnap_3833 4089864 - 4090637 + | ABC transporter related Pnap_3834 4091747 - 4090725 - | helix-turn-helix domain-containing protein Pnap_3835 4091930 - 4093381 + | aldehyde dehydrogenase Pnap_3836 4093420 - 4093740 + | putative p-cresol methylhydroxylase subunit Pnap_3837 4093754 - 4094284 + | hypothetical protein TERM 4930 4094468 - 4094436 - g 74 -9.2 -3.83026 | gap 1 GCCCCCTACACCAAA GTGATGAT-GGCCGT GGAA ACGGCCAAACACCAC CCGTCCGCCGTGATC TERM 4931 4095668 - 4095649 - g 74 -5.6 -4.46854 | opp_overlap 4095652, overlap 4095645 4095650 CCAGCGAAGAAGAAA CCAGGCGC GCCA ACGCCTGC TTCAACGAATTGCTC Pnap_3838 4094298 - 4095851 + | FAD linked oxidase domain-containing protein Pnap_3839 4095881 - 4096777 + | regulation of phenolics degradation protein Pnap_3840 4096811 - 4097818 + | peptidase M19, renal dipeptidase Pnap_3841 4097851 - 4098300 + | thioesterase superfamily protein TERM 4932 4098599 - 4098621 + F 83 -12.6 -3.21099 | GATCGCAGTGCGTGT GTCGGCGCGG GCA CCGGGCCGGC TTCGTCCTGCAAGCC TERM 4933 4099061 - 4099047 - g 78 -3.5 -5.00884 | gap 1, overlap 4099050 ACTTGCGTGAAAAAA GCACCG TCGT CGG-GC CGGTCACGGCGATGC TERM 4934 4099447 - 4099459 + G 76 -6.2 -4.64598 | GCGCACCGACGCCCA GCCG ATGCA CGGC TTTTTGCACTACTTC TERM 4935 4099615 - 4099595 - g 78 -6.7 -4.58395 | opp_overlap 4099584 4099597, overlap 4099597 CTGACGCTGGAAAAA CTCGGCGTC TTC GACGACGGG CCGTTTTCCATCGAC TERM 4936 4100120 - 4100132 + G 74 -4.8 -4.62069 | GGCCAGCTGCTCAAC CCCA GGATA TGGG TTTTTCCCGTGACGC Pnap_3842 4098692 - 4100641 + | putative outer membrane protein pyrF 4101548 - 4100700 - | orotidine 5'-phosphate decarboxylase TERM 4937 4101045 - 4101077 + g 74 -14.2 -2.58861 | gap 1, opp_overlap 4101044 4101047, overlap 4101044 4101047 GATATGTTCATACAG CAGCGGCTGGCCGTC CACC GACG-CCAGGCGCTG GTTCTGCAGGTCGTC Pnap_3844 4102373 - 4101573 - | phage SPO1 DNA polymerase-related protein TERM 4938 4102410 - 4102398 - R 90 -5.5 -5.14563 | CTTTTCATCAAAAAA CTGAC AGG GCCAG GCTCATCACGATGGC Pnap_3845 4102884 - 4102390 - | ribosomal-protein-alanine acetyltransferase Pnap_3846 4103670 - 4102891 - | peptidase M22, glycoprotease TERM 4939 4103468 - 4103413 - G 71 -11.1 -3.53012 | gap 3 GTGGTTGGCGCCAAA GGCCAGGCCCTGCGCCACCGCGCAGGCG GTG CGCAGGC-CGGTGA-AC-GAGCCCGGCC CGCGGCCAAAAGCGA Pnap_3847 4103738 - 4105324 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 4940 4106444 - 4106397 - g 70 -12.1 -3.21395 | gap 3, opp_overlap 4106410, overlap 4106395 ACGCGCGCCACAACA CGCCGCGCATCG-GGC-GCGTG GTGATGG CGCGCGGCCGCGATGC-CGGCG ACGTGCCGATCACGA TERM 4941 4106410 - 4106464 + G 73 -11.4 -3.59979 | gap 1, opp_overlap 4106397 4106395 CACGCCGCGCATCGG GCGCGTGGTGAT-GGCGCGCGGCCG CGATGC CGGCGACGTGCCGATCACGATGTGC TTTGGCGTGAACACG Pnap_3848 4105661 - 4106545 + | transglutaminase domain-containing protein Pnap_3849 4106542 - 4107258 + | N-formylglutamate amidohydrolase TERM 4942 4107461 - 4107403 - g 100 -15.8 -4.11216 | overlap 4107406 CCCGGACGGTGAAAA CTACGTCTGCGCCGACTGCGGCCACGAG TGG CCCATGGCCGCAGCCGCCCTTGACGCCG ACGACAGCGACGATG TERM 4943 4107458 - 4107406 - g 90 -18.3 -3.09004 | overlap 4107403 GGACGGTGAAAACTA CGTCTGCGCCGACTGCGGCCACGAG TGG CCCATGGCCGCAGCCGCCCTTGACG CCGACGACAGCGACG Pnap_3850 4107341 - 4107685 + | alkylphosphonate utilization operon protein PhnA Pnap_3851 4107759 - 4108028 + | hypothetical protein Pnap_3852 4109145 - 4108048 - | alcohol dehydrogenase TERM 4944 4108446 - 4108466 + g 100 -4.6 -5.42259 | CGCAGTTGTTGAAGT TGAGCGTC ACGTC GGCGCCCA TTTTTTTCGAAATGC TERM 4945 4108920 - 4108936 + g 79 -9.3 -4.18018 | opp_overlap 4108896 CTTCGCTGTAACCCT GCACGGC GCT GCCGAGC TTTTCGATCACGCCC Pnap_3853 4109304 - 4109633 + | hypothetical protein TERM 4946 4109975 - 4109943 - g 70 -10.6 -3.53811 | gap 2, opp_overlap 4109965, overlap 4109961 4109964 TTCATGGCCGCGAAA TGGC-CGCGCAG-GCC AAG AGCACCGCGCGCGCCA TCCATGACGGCAGCC Pnap_3854 4109660 - 4110493 + | iron permease FTR1 Pnap_3855 4111223 - 4110468 - | hypothetical protein TERM 4947 4110496 - 4110521 + g 73 -12.6 -3.11192 | CCAGCCAGCCTAGCT TTCAGCGCCG CGTTCT CGGCGCTGAG TTCGGTGATGGTCTG TERM 4948 4111397 - 4111382 - g 100 -4.6 -5.40072 | overlap 4111353 4111383 CTGCGTTCAAAAAAA TCCTGG CCAG CCAGGT GCTGCTGATGTCAGC TERM 4949 4111396 - 4111383 - g 71 -8.1 -3.83561 | overlap 4111353 4111382 TGCGTTCAAAAAAAT CCTGG CCAG CCAGG TGCTGCTGATGTCAG TERM 4950 4112160 - 4112130 - g 76 -11 -3.6944 | overlap 4112128 4112131 CGCTGAACAGAAATA CCCCGCCGCCATGG CTG CCCTGGCGGCTGAA ACCGACAACAGGTAG Pnap_3856 4111357 - 4112175 + | Sel1 domain-containing protein Pnap_3857 4113479 - 4112235 - | PHB depolymerase family esterase TERM 4951 4112410 - 4112447 + g 86 -6.9 -5.06816 | gap 1 GCCTGCTTGTAGATG CGCTGCGTGTAGTCGCGG CCG TTGGGGCTGCGCGC-GCG TTTTTGTTCCGGCCT TERM 4952 4112792 - 4112814 + g 76 -7.7 -4.37527 | gap 2, overlap 4112786 TCATGCCGGCCAGCA GCGCCGGCTCG CCC CG-GCCG-CGC TTTTGGTGGTTGTGC TERM 4953 4113320 - 4113333 + g 81 -3.7 -5.00616 | overlap 4113317 4113320 AATTCATTGCATTGG CCGGG TTGG CCGGG TTTTTTGGCGCGGCC Pnap_3858 4113960 - 4113538 - | CopG/Arc/MetJ family transcriptional regulator TERM 4954 4114132 - 4114116 - R 72 -2.1 -4.8543 | overlap 4114118 4114119 TAATTTTCAGAAAAA TAGCGTG CGG CGCGCTC AATAATGCGGCGGCA Pnap_3859 4114364 - 4114131 - | SlyX family protein TERM 4955 4114930 - 4114951 + G 72 -4.3 -4.56597 | gap 1, opp_overlap 4114929, overlap 4114931 ATCGCCAACGACAAC GCGCTGGGCG CGG CGCTC-GCGA TTTTTGCCGCCGACA TERM 4956 4115006 - 4114984 - g 76 -6.3 -4.45765 | gap 1 CTGAAAATCAAGAAA GTGGCGGTCA TTGA CGACCGC-AC CGCCTACGGCCAGGG Pnap_3860 4114468 - 4115613 + | extracellular ligand-binding receptor Pnap_3861 4116616 - 4115633 - | Sua5/YciO/YrdC/YwlC family protein TERM 4957 4116276 - 4116243 - G 100 -10.2 -5.0133 | gap 1 CAGGCCTTCAAAAAA GCCAGCGCCA-CCGG ATGCG CCGGGCAGCGCAGGC CAATCGACTCCTGGC TERM 4958 4116494 - 4116478 - G 83 -7.9 -4.56597 | CCTTGGCTTTAAAAA TGCCGGC CAC GGCGGCA TCGCTGGACGCATCG Pnap_3862 4117848 - 4116616 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 4959 4116684 - 4116740 + g 78 -6.7 -4.66163 | gap 4, opp_overlap 4116648, overlap 4116684 4116687 CGGCCTTCACGCCCG CC-ACGTCGGCGCCGGTGATCGTCAGATG ACC CATCTTGCGA-C-CCGGC-CGGGCGTCGG TTTTTCCGTACAGGT TERM 4960 4117554 - 4117585 + g 72 -7.2 -4.19953 | gap 1, overlap 4117525 CCACCGGAAGGCTTT CG-GCCAGCGTCTGT AAG GCGGATGCCGGCACG TTTTCAAATTCGGTG TERM 4961 4117771 - 4117808 + g 81 -15.5 -3.05816 | gap 1, opp_overlap 4117729 4117727 CATGCGGCCCAGCTG GCCGCC-GCCCATCACGC CCA GCGTGGCGGGCCGGCCGC TTGCATCGACCGTGC Pnap_3863 4118354 - 4117845 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit Pnap_3864 4118559 - 4119446 + | thioredoxin domain-containing protein Pnap_3865 4119838 - 4119443 - | hypothetical protein TERM 4962 4119525 - 4119498 - G 78 -3.5 -5.06414 | gap 3, overlap 4119499 CGCCGTGAAGAAAAA GGCCGC-TGCTCGG TCG CC-AGCACGCG-CC TGGCGTTCAGGCTGC Pnap_3866 4120498 - 4119917 - | PfpI family intracellular peptidase Pnap_3867 4120850 - 4120614 - | hypothetical protein TERM 4963 4120819 - 4120808 - G 75 -3 -4.86731 | opp_overlap 4120812 4120815, overlap 4120812 4120815 GGCTGGCAAACAAAA TGAA GACT TTCA AGCGAAACTCCTTTT Pnap_3868 4121794 - 4120877 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 4964 4121851 - 4121824 - R 90 -4.9 -5.37593 | gap 2, opp_overlap 4121824 4121840 TTGGAAAGTAAAAAA GCCCGT-G-CGAC TTGG GTCAACCACGGGC TTGAATTATCGCCAA Pnap_3869 4122961 - 4121897 - | fructose-1,6-bisphosphate aldolase TERM 4965 4122858 - 4122826 - G 86 -12.8 -4.07568 | gap 2, overlap 4122782 CGCTGGCTTGCAAAA TGACCGGCGCGCCGAC CTC GTCGGCG-GC-GGCCA TCACGGCCTGGACCT Pnap_3870 4124480 - 4123071 - | histidine kinase TERM 4966 4123731 - 4123692 - G 74 -14.3 -2.53876 | gap 1, opp_overlap 4123695 CTGCAGGGCAATCGA GGCCAGCGGGGT-GCGCA GTTCA TGCGCGATCTCGCTGGCC AGTTGGCGCTCGCGC TERM 4967 4123963 - 4123907 - G 78 -10 -4.09739 | gap 2 GCAAGCCGCGCAAAA TGGCCGCGCCCAGCGC-CAGC-GCGACC ACC GGCAGCAGCCACAGGCCGGGCTCGGCCA GCTGGGCGGCAACGT TERM 4968 4124154 - 4124125 - G 85 -5.5 -5.00616 | gap 1 CGCTGCGCCAAAAAA GGCG-GCAGCGGCG CTT CGCCCGAGCGCGCC AGCAGATGGCCGGCG Pnap_3871 4125169 - 4124477 - | two component transcriptional regulator TERM 4969 4125079 - 4125039 - G 78 -12.4 -3.72968 | AGCACCAGATCGAAA GGCTCGCTGCGCAGGGCC GCCCA GGCGCTGGCCAGCGTGCC GCACACATCGACGGC TERM 4970 4125825 - 4125809 - g 83 -7.9 -4.56775 | opp_overlap 4125819 4125821, overlap 4125811 ATGCCCTGCCAAAAA CCGCCAG GCG CTGGCTG GCCGGGGCGATGCTG Pnap_3872 4125238 - 4126041 + | PAP2 (acid phosphatase) superfamily protein-like protein Pnap_3873 4127509 - 4126076 - | pyruvate kinase pgk 4128906 - 4127713 - | phosphoglycerate kinase TERM 4971 4128252 - 4128271 + g 70 -7.8 -4.07568 | TGGCGATGCCGCCGC CGACGATC AGCT GATCGACG TTTTCGGCCAGCGCC TERM 4972 4128517 - 4128529 + g 87 -5.5 -5.18726 | overlap 4128511 GGCCATCTTGCGCGC CAGCG CTT CGTTG TTTTTCTTCTCGCCC TERM 4973 4128879 - 4128849 - G 73 -6.7 -4.25104 | gap 1, overlap 4128850 CGGCGCGGATGAAAA CGCGCTGGCCGGCC ACCT GGCC-GCTGGCGCA CAAATCGGAAAAACG Pnap_3875 4129374 - 4129021 - | branched-chain amino acid transport TERM 4974 4129132 - 4129120 - G 78 -6.9 -4.60797 | overlap 4129122 GCGCCAGACATAAAA CGCCA CCC CGGCG GTCGCACCAAAAACA TERM 4975 4129349 - 4129335 - G 76 -5.6 -4.62069 | overlap 4129336 CCGCCATGCCAAAAA TGACGC CAA GCGTCC ACCAGTCGGTACCAG Pnap_3876 4130120 - 4129371 - | AzlC family protein Pnap_3877 4131088 - 4130117 - | methionyl-tRNA formyltransferase TERM 4976 4130176 - 4130212 + g 73 -12.8 -3.11732 | opp_overlap 4130163 4130162 4130174 AGCCGCGCAGGAAGT CGGCGGCGGGCAGGCG CTTGC CGCCGGCGCGCTGCAG TTCGGTGACTTTCAG TERM 4977 4130436 - 4130446 + g 72 -2.4 -4.76312 | overlap 4130442 TGGGTCCAGTCCACC GCCG CTT CGGA TTTTTCGATCTTGTG TERM 4978 4131094 - 4131082 - G 71 -4.7 -4.41633 | opp_overlap 4131079 4131082 4131082, overlap 4131079 TACCGGCAAAAATAA CGCGC ATG GGGCG TGATTCTAGAGAGTC Pnap_3878 4131677 - 4131156 - | peptide deformylase TERM 4979 4132983 - 4132967 - g 74 -5.7 -4.42386 | GCCTGACGGACAAAA CGGACAG CGA CCGGCCG GACATCAAGCTGCCC Pnap_3879 4131823 - 4133115 + | peptidoglycan-binding LysM TERM 4980 4133243 - 4133224 - f 95 -12.8 -4.13945 | AGTTTGAGCGGAAAA CCCCGGCC TTCA GGCCGGAG ATGGACAGCGTGGAC TERM 4981 4133252 - 4133274 + F 79 -11.2 -3.64028 | overlap 4133250 4133255 GCCGGAGATGGACAG CGTGGACGGC GAA GCCGTCCCTG TATTTGGTTTGCATT TERM 4982 4133255 - 4133271 + F 78 -13.7 -2.62386 | overlap 4133252 4133250 GGAGATGGACAGCGT GGACGGC GAA GCCGTCC CTGTATTTGGTTTGC TERM 4983 4134123 - 4134112 - g 72 -2.2 -4.81249 | CCGCAAAGTCAAAAA CAGC CGGA ACTG GCACAAAGCCAAAAG TERM 4984 4134230 - 4134220 - g 73 -3.2 -4.79223 | overlap 4134223 CGAGATCAGCAAAAA CCAC GCC ATGG TCGCTATTGAGGACT Pnap_3880 4133447 - 4134682 + | IS605 family transposase OrfB TERM 4985 4134715 - 4134694 - g 89 -17.3 -3.14564 | GTAGCGCCGCAGGAA TCCCCCGCC TTCA GGCGGGGGA GGATGTCAAGGATTC TERM 4986 4134855 - 4134841 - g 84 -11.4 -4.16016 | CCATTTTTGAACAAA GCAGCG CGA CGCTGC AAAAACTCGGCTCCG TERM 4987 4135317 - 4135301 - g 76 -5.7 -4.62069 | overlap 4135305 GGTCTACCCCAAAAA GCACCTG GCC CTGGCGC ACCGCATTGCCCGGC Pnap_3881 4134675 - 4135874 + | DNA protecting protein DprA Pnap_3882 4135899 - 4136414 + | hypothetical protein TERM 4988 4136452 - 4136416 - T 76 -12.4 -3.05384 | overlap 4136419 GCCTGGCGCACTGAA CGACCGGGCT-GCTGCTG CGT CAGCAGCTAGCCCAG-CA AACGCTCCGGATTGG TERM 4989 4136450 - 4136419 - T 91 -17.4 -2.75064 | gap 1, overlap 4136416 TGGCGCACTGAACGA CCGGGCT-GCTGCTG CGT CAGCAGCTAGCCCAG CAAACGCTCCGGATT Pnap_3883 4138784 - 4136442 - | hypothetical protein TERM 4990 4137832 - 4137856 + g 81 -9.9 -4.19817 | CGGCTGATGGCTTGC TCCAGCCGGGG CGA CGCCTGCTGGA TTTTGGCTGCGTCAA TERM 4991 4138614 - 4138624 + g 73 -6.8 -4.25104 | TGAAGTCGTGGCGGG CAGC GGC GCTG TTTTGGTCCAGGCCC secF 4139842 - 4138889 - | preprotein translocase subunit SecF TERM 4992 4139075 - 4139060 - G 72 -3.9 -4.55798 | overlap 4139063 CAGCGCAAAGTAAAA CAGCG TCGGGC CGCCG AACAGCAGCATCGAC TERM 4993 4139768 - 4139750 - G 75 -3 -4.90906 | overlap 4139752 4139753 CGAGAACAGGAAAAA CACCGCCA GCG CGAAGGTG ACGAAACTGATGAGG secD 4141758 - 4139881 - | preprotein translocase subunit SecD TERM 4994 4140630 - 4140640 + g 72 -2.4 -4.7416 | opp_overlap 4140625 4140630 TTTCAAACAGCAAAA TCGC CAT GCGC TTTTTGAGGTTTTCA TERM 4995 4140848 - 4140820 - G 72 -4.4 -4.56597 | gap 1, opp_overlap 4140837, overlap 4140836 4140837 4140840 GTTGCGCTCGAAAAA GCGCTCCGA-GCC AAAA GGCACCGGGCCGC TGCCGCTCTCGGCGG TERM 4996 4140852 - 4140836 - G 72 -7.9 -4.18018 | opp_overlap 4140837, overlap 4140820 4140837 4140840 CGCTCCGAGCCAAAA GGCACCG GGC CGCTGCC GCTCTCGGCGGCTCG TERM 4997 4141003 - 4141017 + g 71 -11.4 -3.40639 | CTGCTGGATCACCGG CTCGGC CAC GCCGAG TTCGTTGATGCGGTT TERM 4998 4141820 - 4141792 - R 86 -10.2 -4.15061 | GAACGGATAGACAAA GAGCGGGCCTGA TTTGT CCAGGCACGCCC GGCTGGACCGTCGTT Pnap_3886 4142130 - 4141849 - | preprotein translocase, YajC subunit TERM 4999 4142138 - 4142165 + r 81 -12 -3.53224 | gap 1, opp_overlap 4142133 GTGGACATCATGTCA CTGCCGCCAGCTG CGG CAGCGGG-GGCAG TTTGGGCAAAGGCTG TERM 5000 4142255 - 4142231 - R 76 -9.2 -3.99957 | opp_overlap 4142231, overlap 4142232 GGAAACACTGACAAA CGCTCAGGCC ATGAA GGCCGGAGCA TGAATTGGTGGATTG Pnap_3887 4146009 - 4142389 - | indolepyruvate ferredoxin oxidoreductase TERM 5001 4144155 - 4144209 + g 72 -4.2 -4.60487 | gap 2, opp_overlap 4144153, overlap 4144157 4144158 4144160 GGTCGTTGATCAACT CGGCGTGGCCGGCGCGCGCAGCGCTG CTGTC CAGCG-TATGCGTGC-GGCCATGGTA TTTTTCGGGCTCGTC TERM 5002 4144157 - 4144207 + g 74 -9 -3.91506 | gap 2, opp_overlap 4144153, overlap 4144155 4144158 4144160 TCGTTGATCAACTCG GCGTGGCCGGCGCGCGCAGCGCTG CTGTC CAGCG-TATGCGTGC-GGCCATGG TATTTTTCGGGCTCG TERM 5003 4144158 - 4144206 + g 70 -12.5 -2.94422 | gap 2, opp_overlap 4144153, overlap 4144157 4144155 4144160 CGTTGATCAACTCGG CGTGGCCGGCGCGCGCAGCGCTG CTGTC CAGCG-TATGCGTGC-GGCCATG GTATTTTTCGGGCTC TERM 5004 4146089 - 4146064 - H 83 -12.6 -3.29144 | gap 1, opp_overlap 4146063 4146076 GCAGGGGTTTCACAA GCGTCAGGCCC GGTCG GGGCC-GACGC CTTCACTTTAGGCAA Pnap_3888 4146128 - 4146694 + | AsnC family transcriptional regulator TERM 5005 4146861 - 4146882 + G 81 -11.6 -3.90922 | CGCCCAAACTTCGTT GCGTTGCC AATCCC GGCAACGC TTATTTAAACGAGGT TERM 5006 4147106 - 4147061 - g 86 -15.6 -3.54158 | gap 1, opp_overlap 4147058, overlap 4147057 GACGGCAACAAGTAA TTGCCACCCTTGCCCGAGCGA GCCTT TCGCTCGGGCAATGG-AACAA CGATGCATTACAGCA Pnap_3889 4146742 - 4147170 + | hypothetical protein TERM 5007 4147410 - 4147420 + F 70 -5.4 -4.44819 | overlap 4147413 ACACACAGCATACAT TTGG ATA CCAA TTTTGGTGTCTTGTG Pnap_3890 4147498 - 4147833 + | hypothetical protein TERM 5008 4147920 - 4147896 - T 100 -17.9 -4.85129 | ATTAGATAGCAAAAA GCCCGATCTCC GCA GGAGACCGGGC AACCGGCTGAGCCGG Pnap_3891 4150182 - 4147972 - | hypothetical protein TERM 5009 4149694 - 4149682 - G 73 -3.3 -4.7497 | GGCATGCACGAAAAA GGAGC TGA GCTTC TCGTCGGTGGTGGCT TERM 5010 4149797 - 4149841 + g 75 -3.6 -4.85599 | opp_overlap 4149784, overlap 4149786 4149798 4149802 CACTCCATGCCGTCA TGGTGGTCGCCGGCA-CGGTTT TCA AAGTCGGTGTCGGTG-CCGTCG TTTTTGTAGGCTGGC Pnap_3892 4150656 - 4150291 - | hypothetical protein Pnap_3893 4151919 - 4150675 - | MltA domain-containing protein TERM 5011 4150769 - 4150796 + g 72 -14.1 -2.78384 | opp_overlap 4150760 4150762 GCAAAATAGTCGGCG CGGACAGCGCC CACGAT GGCGCTGCCCG TGTCCTGCGCCAGCA TERM 5012 4150999 - 4151029 + g 74 -4.6 -4.56775 | overlap 4150998 GGTGTAGCGCGGGTT GCTCCAGAGCAT TTGCTGC ACGCGCTGGGGC TTTTTCGCGGCCCAT TERM 5013 4151342 - 4151314 - G 70 -7.4 -4.07568 | TTCCTGGCGCGAAAA CCACGG-CCGGCGG TTG CC-CAGGCCCGTGG GCGGCCGGTACAGGG TERM 5014 4152036 - 4152014 - R 80 -9.8 -3.95036 | overlap 4152001 AAGGATGGGAAATAA GCGCCATCCG CTA CAGATTGCGC AGCAGATTGGCCAGC Pnap_3894 4152650 - 4152024 - | response regulator receiver protein TERM 5015 4152128 - 4152144 + g 75 -12.3 -3.62775 | GCACGCTGATGTCGA GCTGGTC GGC GACCAGC TTGTTCGGCAGTCCT TERM 5016 4152343 - 4152325 - G 100 -3.8 -5.40072 | overlap 4152332 GGCTTTTCAAAAAAA TCAAAGGC GCC GCGCTTGA CCGAATCGACGGCGG Pnap_3895 4154748 - 4152652 - | multi-sensor signal transduction histidine kinase TERM 5017 4154152 - 4154176 + g 70 -7.8 -4.08216 | opp_overlap 4154151 GCCTTGTGACAAAGG CTTGCTGACC ACTTC GGCCAGCAGG TTTTGCAGCGAATAG TERM 5018 4154550 - 4154593 + g 75 -12.4 -3.65812 | gap 1, opp_overlap 4154540, overlap 4154588 GAAAAGCCTGAAGGT TGCGGTTCAGGCCG-GAGCGG ATA TCGGTCACGGCTTGCGCCGCA TTGTCTTCAAGCCGG TERM 5019 4154735 - 4154703 - G 81 -13.3 -3.72588 | CAAGCCACAGGGAAA TGCGCTGGCTGGCCC AAC GGGCCAGCCGGGGAA ACTTCAGGCTCATCA Pnap_3896 4155559 - 4154753 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 5020 4155370 - 4155385 + g 78 -4.6 -4.73388 | opp_overlap 4155362 TCAGGAAGTCCTGGA TCAGGC CGCT GCCGGA TTTTTCCTGGACCTT TERM 5021 4155479 - 4155438 - G 73 -3 -4.68593 | gap 3, overlap 4155440 CCCATGACGCAAAAA TACT-CGG-GCAGGACGGCCA ACT CGGC-GCCCTGCGCCGCAGCC TGCGCCAGCAGCGCC Pnap_3897 4159701 - 4155562 - | hypothetical protein TERM 5022 4157155 - 4157197 + g 72 -14.1 -2.73364 | gap 1, opp_overlap 4157136 4157133 GGCGGTGTAGGCCGT GCTGCCGCTGGCAT-GCGCG GCCA CGCGCGACGCCAGCCCCAGC TCCTTGGCCTGGCGC TERM 5023 4158269 - 4158252 - G 74 -4.8 -4.58395 | opp_overlap 4158257 TCGAGTCTTCAAAAA CTCCGG GCAGCT CCAGAG CGCCTTTTGCAATCT TERM 5024 4158773 - 4158755 - G 72 -8 -4.19817 | GCCAGGGATTCAAAA GCCAGCGG CTC CAGCCGGC TGCCCAGCCGGGCGT TERM 5025 4161181 - 4161126 - g 100 -21.2 -3.53343 | gap 1, overlap 4161127 AAGGGCTGCGGCAAA GCGGGCGACAGGCCGGTCCAGCAGCTC GAT GACCTGCTCGACCAGC-TGCCGCCCGA GTGGCCGGCGCAGTT TERM 5026 4161180 - 4161127 - g 100 -24.7 -2.71791 | gap 1, overlap 4161126 AGGGCTGCGGCAAAG CGGGCGACAGGCCGGTCCAGCAGCTC GAT GACCTGCTCGACCAGC-TGCCGCCCG AGTGGCCGGCGCAGT TERM 5027 4161372 - 4161326 - g 78 -14.2 -3.08996 | overlap 4161324 CAGCGTGAGCGAAGA GGCGGCGCTGCGGCTGATCGAC TGG ATCGAGCCGCTGCTGCGCCGCG AAAGCTACCTGGCAC TERM 5028 4162104 - 4162133 + G 91 -16.5 -3.54424 | gap 1 ACGCGCGCGCGTTTC GTGCTGG-GCAGCG AGT CGCTGCACCAGCGC TTTGACGAGGTGCGC TERM 5029 4162233 - 4162217 - g 77 -13.7 -3.30771 | GGACATGCGCCAGAA GGTGCGC GGC GCGCACC CCATCCGGGGCGGCA Pnap_3898 4159773 - 4162562 + | (glutamate--ammonia-ligase) adenylyltransferase Pnap_3899 4162673 - 4163416 + | TetR family transcriptional regulator Pnap_3900 4163413 - 4164879 + | RND efflux system outer membrane lipoprotein TERM 5030 4165400 - 4165377 - g 70 -10.3 -3.55444 | gap 1 CGCGCAGCCTGCAAA GCTCGGGCGC GCTGA GCGCCC-AGC AGATCAACCAGTATT TERM 5031 4165488 - 4165431 - g 91 -12.1 -4.386 | gap 4, overlap 4165439 4165440 TAACGCTTGAGAAAA CCGC-CAA-AGC-GCGCGCCGAA-GCCGC GCAG GCGGTGCTCGGCGCGCAGCAGTTGCGCGG CCGCCAGACGCAGGT TERM 5032 4165478 - 4165439 - g 85 -14.3 -3.67737 | gap 2, overlap 4165431 4165440 GAGAAAACCGCCAAA GC-GCGCGCCGAA-GCCGC GCAG GCGGTGCTCGGCGCGCAGC AGTTGCGCGGCCGCC TERM 5033 4165476 - 4165440 - g 75 -14.4 -2.79919 | gap 1, overlap 4165439 4165431 AGAAAACCGCCAAAG CGCGCGCCGAA-GCCGC GCAG GCGGTGCTCGGCGCGCA GCAGTTGCGCGGCCG Pnap_3901 4164947 - 4166137 + | RND family efflux transporter MFP subunit TERM 5034 4167435 - 4167462 + G 76 -6.2 -4.56597 | overlap 4167414 4167453 CGGCCTGGCGGTGGT CGCCACGACC TTCACGCT GGTCGCGGTG TTTTTGCCGACGGCC TERM 5035 4168593 - 4168572 - g 70 -12.3 -3.16564 | gap 1 GGGCGACGTGACCAA GGCGGTGCAG GAA CTGC-CCGCC GTGAAGAACCTGCCC Pnap_3902 4166134 - 4169268 + | acriflavin resistance protein Pnap_3903 4169319 - 4169576 + | hypothetical protein Pnap_3904 4170070 - 4169816 - | addiction module antitoxin Pnap_3905 4170318 - 4170067 - | prevent-host-death family protein Pnap_3906 4171514 - 4170576 - | LysR family transcriptional regulator Pnap_3907 4171613 - 4172620 + | hypothetical protein Pnap_3908 4172617 - 4173705 + | iron-containing alcohol dehydrogenase Pnap_3909 4173805 - 4174800 + | alcohol dehydrogenase Pnap_3910 4175415 - 4174921 - | rfaE bifunctional protein Pnap_3911 4176281 - 4175412 - | hypothetical protein TERM 5036 4176677 - 4176652 - g 75 -3.9 -4.77036 | gap 1 CTGCAGGATGAAAAA CCGCAGTCGCTG TGC CAGT-ACAGCGG CAAGGTCGTGGTAGT Pnap_3912 4176514 - 4177083 + | glutathione peroxidase TERM 5037 4177097 - 4177065 - T 71 -6.1 -4.35524 | overlap 4177068 GGCCGAAATCGAAAA GCAGCTGGCCAGGCC ATG AGCCCAGCAAGCCCC TGCGTACAGGCTGCA Pnap_3913 4178030 - 4177416 - | glutathione S-transferase domain-containing protein Pnap_3914 4178115 - 4179566 + | adenylosuccinate lyase TERM 5038 4179606 - 4179587 - T 71 -10.7 -3.24021 | opp_overlap 4179587 TTCCTAAATATTGAA GCGGGCT TTGGAC AGCCCGC TTTTTTTGTGCCCGG TERM 5039 4179587 - 4179606 + T 100 -10.7 -5.60993 | opp_overlap 4179587 TTCCTAAATATTGAA GCGGGCT TTGGAC AGCCCGC TTTTTTTGTGCCCGG Pnap_3915 4179948 - 4179637 - | hypothetical protein TERM 5040 4179706 - 4179736 + g 71 -13.9 -2.52623 | overlap 4179705 4179703 GCCTTCGACCGTTTC GCCGCAACGGCAC AGCCA GCGCCGCTGCGGC ATGTTCTGCAGCGCG Pnap_3916 4180465 - 4180055 - | hypothetical protein TERM 5041 4180404 - 4180354 - G 74 -13.4 -2.87564 | gap 3, opp_overlap 4180354 4180368 CCATGCGCGCATACA CCCCGGCC-AGGGCGCGCAC-CTCG GGCG CGAGCGT-CACGCCGTCGGCCGAGG GGTGTTTGCCGCGCC TERM 5042 4180368 - 4180408 + g 74 -11.8 -3.53224 | opp_overlap 4180354, overlap 4180354 ACCCCGGCCAGGGCG CGCACCTCGGGCG-CGAGCG TCA CGC-CGTCGGCCGAGGGGTG TTTGCCGCGCCAATA TERM 5043 4180528 - 4180495 - H 83 -5.9 -4.9251 | gap 1, opp_overlap 4180495 AAGAAAAAAGCAAAA GGCGCCGCGGGCAA CATGGCC TGGGCCG-GGCGCC TGATTATCGGCCGGT TERM 5044 4180942 - 4180966 + G 95 -10.7 -4.42238 | TTATTTACAGCCCCC TGGTGGTCGGC CCT GCTGGCCATCA TTTTGATTGACCTGG Pnap_3917 4180921 - 4181637 + | integral membrane protein TerC Pnap_3918 4181690 - 4182043 + | membrane protein of unknown function Pnap_3919 4183648 - 4181999 - | peptidase M48, Ste24p TERM 5045 4182563 - 4182519 - G 78 -7 -4.56597 | gap 1, overlap 4182520 4182522 4182556 CGCGCCGCCGAAAAA TCACGCAGCTGGGCGGCAGCG AAGG CGCCGCCATACAGC-GCGCCA GCATCGCGGACCGTG TERM 5046 4182958 - 4182944 - G 73 -11.4 -3.62096 | CTCCATCACGCCAAA GCCGAC GCG GTCGGC CTCGCGCTCCATGTC TERM 5047 4183920 - 4183891 - g 85 -5.8 -5.09426 | gap 3, overlap 4183893 GGCAACGCCAAAAAA GGCGATGTGCTGGGC ATT GCCC-GCA--TCGCC GGCATCATGGCGGCC TERM 5048 4183954 - 4183943 - g 90 -2.2 -5.40072 | TGGCGGCCAAAAAAA CCAG CGAC CTGA TTCCCCTGTGCCATC Pnap_3920 4183729 - 4184250 + | molybdenum cofactor biosynthesis protein C Pnap_3921 4184382 - 4185365 + | phage integrase family protein Pnap_3922 4186064 - 4185753 - | hypothetical protein TERM 5049 4185929 - 4185946 + g 78 -3.4 -5.08601 | gap 1 CCCGGACTTCTTGAT GCGTAGG GTGAG CC-ACGC TTTTTGTTGCGATGG Pnap_3923 4186476 - 4186793 + | hypothetical protein Pnap_3924 4186852 - 4187880 + | DNA/RNA non-specific endonuclease TERM 5050 4187892 - 4187907 + F 76 -5.4 -4.78572 | TTGAAGCATCCAGTC TGCCAT TGAA GTGGCA TTTTGTTCATTGCCC TERM 5051 4189617 - 4189603 - g 79 -8.6 -4.27001 | overlap 4189600 TAAGAAAAAATACAA GTCAGA CCT TCTGAC AATGGCAGCAAAAGA Pnap_3925 4188287 - 4189954 + | hypothetical protein TERM 5052 4191510 - 4191523 + G 100 -5.3 -5.75342 | opp_overlap 4191505 4191510 AAATAAAAGGCAAAG CTTCT TTAG AGAAG TTTTTTTTGCCCAAG Pnap_3926 4189958 - 4191550 + | DNA-directed DNA polymerase Pnap_3927 4192380 - 4191955 - | hypothetical protein Pnap_3928 4193028 - 4192453 - | resolvase domain-containing protein TERM 5053 4193271 - 4193251 - H 72 -2.6 -4.93365 | TTTGAGAATTAAAAA GTTGATTT ATTAG AGATCAAC ATAACCATCAATAAA Pnap_3929 4193291 - 4193680 + | hypothetical protein TERM 5054 4195065 - 4195031 - g 88 -4.4 -5.2853 | overlap 4195019 TATGCAAAAATAAAA TTTTGCCAAATTTAAA TAC TGTTTATTTGGCAAAA AAGAATAGCGAAGGA Pnap_3930 4193869 - 4195266 + | hypothetical protein TERM 5055 4195293 - 4195283 - g 72 -4 -4.55689 | ATGACTCATATAAAA GAAA TAG TTTC AAGCAACGAAAAAAA TERM 5056 4195320 - 4195309 - g 93 -3 -5.66868 | opp_overlap 4195318 AAGCAACGAAAAAAA GAAA GAGC TTTC TAGCGAAGAATTTAA TERM 5057 4195393 - 4195382 - g 77 -4.4 -4.8236 | GATGCAAAAAAAGAA TACG CTAT CGTA AAAGAGCAGGAGGCT TERM 5058 4195666 - 4195655 - g 85 -3 -5.37593 | GGTGAAATGAAAAAA GTTT TTGA AAAC ACTGACGGTATTCTT Pnap_3931 4195253 - 4195690 + | hypothetical protein TERM 5059 4195835 - 4195857 + F 100 -8.4 -5.4833 | opp_overlap 4195822 AACAGGTCTATCAAA CCCGTTGTGC TGT GTGCAATGGG TTTTTTATTGGATGA Pnap_3932 4195904 - 4196413 + | hypothetical protein TERM 5060 4196986 - 4197025 + G 71 -8.6 -3.92641 | gap 1, overlap 4196989 TGCGAAGATCATCAG TGCTTCAGCCTCTGGAGCC TAC GG-TCCTGAGGTTGAATCG TTTATGGGTGCGCTT TERM 5061 4197118 - 4197103 - g 78 -3.4 -5.00339 | opp_overlap 4197097, overlap 4197097 ATCAATAATTAAAAA TAATTT TATT AAATTA AGTTGCAATGAACTG Pnap_3933 4196732 - 4197397 + | hypothetical protein TERM 5062 4197806 - 4197846 + F 81 -12.2 -3.54638 | ATTTACGGCTGTGAA TTTGCAAGAAAATAAATG CTATT CATTTGATTTCTTGCAAA TTTCGACAAGATTCT Pnap_3934 4199081 - 4199467 + | hypothetical protein Pnap_3935 4200273 - 4200710 + | hypothetical protein Pnap_3936 4200712 - 4200969 + | hypothetical protein Pnap_3937 4201842 - 4201258 - | hypothetical protein Pnap_3938 4203382 - 4202561 - | hypothetical protein TERM 5063 4202747 - 4202757 + g 86 -8.2 -4.54047 | opp_overlap 4202742 TGACTTAAACTTGCT GCGC AAT GCGC TTTTCTCTAGCGTGA TERM 5064 4203778 - 4203790 + r 80 -4.9 -5.10767 | opp_overlap 4203778, overlap 4203772 ATAGTTATCGTAAGA TTCAA AAT TTGAA TTTTTCTGTTGGATG TERM 5065 4204735 - 4204745 + r 90 -8.2 -4.68132 | overlap 4204734 CTTCGCTCCTAACCT GCGC TTC GCGC TTTCTTTATATGTTC TERM 5066 4204875 - 4204908 + r 78 -6 -4.74504 | opp_overlap 4204875 TAGCATTCAAAAAAA GCCTCCACAAGC CTTTATAGTA GCTTCTGGGGGC TTTTTCCATTCAACT TERM 5067 4204908 - 4204875 - R 93 -4.5 -5.48825 | opp_overlap 4204875 TAGCATTCAAAAAAA GCCTCCACAAGCC TTTATAGT AGCTTCTGGGGGC TTTTTCCATTCAACT TERM 5068 4205378 - 4205359 - R 100 -9.3 -5.22039 | opp_overlap 4205359 4205354 TTCAAACGTAAAAAA GCCTGCT GATCAG AGCAGGC TTTTAGTTTGTGCAT TERM 5069 4205359 - 4205378 + r 89 -9.3 -4.62475 | opp_overlap 4205359, overlap 4205354 TTCAAACGTAAAAAA GCCTGCT GATCAG AGCAGGC TTTTAGTTTGTGCAT Pnap_3939 4205700 - 4205401 - | histone-like nucleoid-structuring protein H-NS Pnap_3940 4206626 - 4206222 - | hypothetical protein TERM 5070 4206850 - 4206836 - H 100 -8.5 -5.86061 | opp_overlap 4206831 4206836 TTGGACGAAAAAAAA CCCGC ACTAG GCGGG TTTTATGTTGGTGAT TERM 5071 4206836 - 4206850 + H 90 -8.5 -4.71186 | opp_overlap 4206836, overlap 4206831 TTGGACGAAAAAAAA CCCGC ACTAG GCGGG TTTTATGTTGGTGAT Pnap_3941 4207877 - 4208053 + | molybdenum cofactor biosynthesis-like protein Pnap_3942 4209595 - 4208075 - | O-antigen polymerase Pnap_3943 4210608 - 4209757 - | FimB TERM 5072 4210590 - 4210575 - G 74 -4.8 -4.65916 | GCCAGTTTAATAAAA TACATT TAAT AATGTA AACATACTCATTTAA Pnap_3944 4211136 - 4210636 - | fimbrial protein pilin TERM 5073 4211553 - 4211570 + r 88 -11.3 -4.18494 | opp_overlap 4211553 CAACTCAAAAAAAAA GGAGTGC TTAA GCACTCC TTTTACATAACCGTC TERM 5074 4211570 - 4211553 - R 100 -11.3 -6.15259 | opp_overlap 4211553 CAACTCAAAAAAAAA GGAGTGC TTAA GCACTCC TTTTACATAACCGTC Pnap_3945 4212106 - 4211606 - | fimbrial protein pilin TERM 5075 4212195 - 4212178 - R 91 -11.3 -4.27192 | opp_overlap 4212178 AAAGTTTCATTAAAA GGAGTGC TCAA GCACTCC TTTTACATAACCGTC TERM 5076 4212178 - 4212195 + r 88 -11.3 -4.18494 | opp_overlap 4212178 AAAGTTTCATTAAAA GGAGTGC TCAA GCACTCC TTTTACATAACCGTC Pnap_3946 4212740 - 4212231 - | fimbrial protein pilin TERM 5077 4213193 - 4213162 - R 78 -6.5 -4.57073 | overlap 4213187 4213188 CATCGCGGCCAAAAA CCTGCAGTTCTCC AGGGCG GGATAACCGCGGG CGCGTGATGCTTCAC TERM 5078 4213211 - 4213230 + r 74 -10.7 -3.5393 | opp_overlap 4213188 4213187, overlap 4213220 CGTGATGCTTCACCG CTGCGCC CGCCAC GGCGCAG TTTCAGCGCCATGGT TERM 5079 4213220 - 4213244 + r 77 -11.3 -3.48772 | opp_overlap 4213188 4213187, overlap 4213211 TCACCGCTGCGCCCG CCACGGCGCAG TTT CAGCGCCATGG TTCTGTCCACCGATT Pnap_3948 4213895 - 4213602 - | DNA polymerase beta subunit TERM 5080 4214041 - 4214054 + r 72 -3.7 -4.72272 | opp_overlap 4214025 4214024 TGCATGCAGTTGATG CACGC CGAT GCGGG TTTTTGGTGACCCGG Pnap_3949 4214670 - 4214104 - | FHA domain-containing protein Pnap_3950 4215495 - 4214710 - | protein phosphatase 2C domain-containing protein TERM 5081 4215187 - 4215168 - G 83 -6.4 -4.82901 | gap 1 GGCCTTCGACAAAAA CACC-CGCC ACC AGCGTGGTG CCCATGCCCTCATAG Pnap_3951 4216350 - 4215649 - | integral membrane protein TerC TERM 5082 4216403 - 4216376 - R 100 -12.8 -5.42514 | opp_overlap 4216374 4216372 4216376 TGAGAAATGAAAAAA GACCGATTGTCA GCGA TGACAACCGGCC TGTCTGTTGTGGCTA Pnap_3952 4217359 - 4216463 - | succinyl-CoA synthetase subunit alpha TERM 5083 4216637 - 4216649 + g 75 -3.3 -4.88228 | opp_overlap 4216637, overlap 4216631 CACGCCAGCGATGAA GCCGA CGA TAGGC TTTTTCATGTTGGCT sucC 4218537 - 4217377 - | succinyl-CoA synthetase subunit beta Pnap_3954 4218773 - 4219684 + | N-acetyl-gamma-glutamyl-phosphate reductase Pnap_3955 4220302 - 4219796 - | regulatory protein RecX TERM 5084 4220231 - 4220260 + g 71 -13 -3.05384 | gap 1, opp_overlap 4220237 4220238, overlap 4220238 GCCCTTGAGCGACAG GCCAAAGCCTGCC CGGGA GGCAGG-TTTGGC TTCACTCACCGCGCA TERM 5085 4220238 - 4220254 + g 71 -9.4 -3.76952 | opp_overlap 4220237 4220238, overlap 4220231 AGCGACAGGCCAAAG CCTGCC CGGGA GGCAGG TTTGGCTTCACTCAC TERM 5086 4220305 - 4220316 + r 70 -3 -4.75372 | opp_overlap 4220311, overlap 4220311 GGAACTGCGCCATGC GATA CAGC TATC TTTTTAATAGCTGCT Pnap_3956 4221535 - 4220381 - | recA protein TERM 5087 4220439 - 4220450 + g 71 -5.8 -4.26189 | opp_overlap 4220428, overlap 4220428 ACCACCGCTTTCACC GGCT TGTC AGCC TTTTCGACTTTCTCG Pnap_3957 4221724 - 4222221 + | MarR family transcriptional regulator TERM 5088 4223004 - 4222978 - g 80 -5.1 -4.91084 | gap 2, opp_overlap 4222980, overlap 4222980 AAGAAAATCGAAAAA GGGC-CGGT-GCG CAT CGCCACCGTGCGC GGGCTGGGTTATTGC Pnap_3958 4222366 - 4223040 + | two component transcriptional regulator Pnap_3959 4223057 - 4224502 + | integral membrane sensor signal transduction histidine kinase TERM 5089 4224635 - 4224585 - f 78 -13.3 -2.50988 | overlap 4224584 4224582 4224587 CTATATTATTAATAG CATTCTGGCGCTGTCGCAACG ATTGCCAGG CGCGGCGGCAGCGCCACAATG GGTCATCGTCCTATA TERM 5090 4225534 - 4225568 + G 75 -13.6 -3.01791 | gap 2, opp_overlap 4225526 4225553 TGAAGGACTTCCTCG GGGC-CGTGGCC-GCC AGCAA GGCCGGCCGCGCGCCC TCTTGAAGCGGCACT Pnap_3960 4224633 - 4225574 + | peptidase C26 TERM 5091 4227156 - 4227202 + G 82 -14.2 -3.34398 | overlap 4227154 GGCTGCTGGCCTGGG CGCTGGCCCGGCCGGCCTGGGT GTC GCGCAGCCCGGCGCGGCTGGCG TATTTCCGCACCGGC TERM 5092 4227308 - 4227324 + G 87 -5.7 -5.21709 | overlap 4227307 4227309 GTGCAGGCCTTGCTG GCCGGGC GCA GCCTGGA TTTTTTCATGTACGA TERM 5093 4227309 - 4227323 + G 71 -9.2 -3.72302 | overlap 4227307 4227308 TGCAGGCCTTGCTGG CCGGGC GCA GCCTGG ATTTTTTCATGTACG TERM 5094 4227373 - 4227403 + G 79 -9 -4.11692 | gap 1, overlap 4227368 GTGGGGCGCGGTGGC CGTGGCCTCGGTC GCCTGG GGCCGGGG-CACG TTTTGCGGCTGGCTG TERM 5095 4227748 - 4227760 + G 70 -10.5 -3.6682 | CATGGCGGTGCTGGG GCGGC TGC GCCGC TTTGACTGGCTCACG Pnap_3961 4225808 - 4228039 + | regulatory protein, putative Pnap_3962 4228036 - 4229019 + | ApbE family lipoprotein TERM 5096 4229095 - 4229061 - T 71 -5.7 -4.30576 | gap 2 GTTTGAGCATCAAAA GCCGCACTTGCGCACAC CCC GCCTGCGCA-G-GCAGC TATCAAAAAGATAGC Pnap_3963 4232103 - 4229131 - | DNA topoisomerase III TERM 5097 4229868 - 4229881 + g 77 -3.7 -4.91109 | opp_overlap 4229859 4229858, overlap 4229869 CAAAATCGACGATCT CGCCG GTGT CGGCA TTTTTGTCGTCGCCG TERM 5098 4229965 - 4230002 + g 72 -2.6 -4.77165 | gap 2, overlap 4229966 CTCGGCGGTGAACGG CCAGCCCGCCTTGGAGCG AAAA CCCTCCA-G-CGGGCCGA TTTTCTTGTCGCGCA TERM 5099 4230074 - 4230130 + g 84 -8.6 -4.45544 | gap 2, opp_overlap 4230073 4230074, overlap 4230078 GGCGTTTTGCCAAAG CTGAAGCCGC-A-GCCTTCGCCGTCGCC GGT GGCGCCGGTGCAGGTATAGCGGCGGTAG TTTTCCTTGATCACG TERM 5100 4230246 - 4230286 + g 76 -14 -3.12327 | overlap 4230244 GGTTCTTCGTCATGG CGGCAATCTCGGCCATGA AGGTC TCGCGGCTGAGCTTGCCG TGTTCCATCTGCGCG TERM 5101 4230469 - 4230486 + g 78 -4.8 -4.7497 | gap 1, overlap 4230454 CGTGGCGGCGCGGGT GGCC-GG CGTGC CCAGGCC TTTTTCCTGCATGGC TERM 5102 4230840 - 4230823 - G 78 -6.9 -4.56597 | overlap 4230835 GGCGTTCGGGAAAAA CACCGCC ATGA AGCGGCG CACCACCAAGTCATA TERM 5103 4232143 - 4232163 + H 95 -5.3 -5.38047 | overlap 4232144 TCGGGGAACGCTGTC CCCGCCTTG CGC CAAAGCGGC TTTTTTCTATCCCTG TERM 5104 4232144 - 4232162 + H 73 -8.8 -3.81744 | overlap 4232143 CGGGGAACGCTGTCC CCGCCTTG CGC CAAAGCGG CTTTTTTCTATCCCT Pnap_3964 4232301 - 4232834 + | nuclear protein SET TERM 5105 4233110 - 4233148 + G 79 -15.3 -2.95081 | opp_overlap 4233095, overlap 4233108 4233105 GCGCCGGACGCGGAC GGCTG-GGCCGCAGCTGGC AAG GCCGGC-GCGGCGACAGCC TGATGTTTTCGCTGG Pnap_3965 4232842 - 4233768 + | biotin--acetyl-CoA-carboxylase ligase TERM 5106 4234321 - 4234298 - g 72 -11.6 -3.29471 | CCTGGACCAGATGAA CGAGCGCGGC CTGC GCAGCGCCCG GGTGACGCTGGAGCG TERM 5107 4234424 - 4234471 + G 78 -10.5 -3.9748 | gap 1, overlap 4234424 CAAGCCCCAGCTGGC GGGCAAGGCGCTGCAGGCCTGC GCGTA GCAGGCTGGCCG-GCATTGCTC CTTTTTTTATAGCTG TERM 5108 4234424 - 4234472 + G 100 -8.1 -5.64274 | overlap 4234424 CAAGCCCCAGCTGGC GG-GCAAGGCGCTGCAGGCCTGC GCGTA GCAGGCTGGCCG-GCATTGCTCC TTTTTTTATAGCTGC Pnap_3966 4233762 - 4234451 + | putative signal peptide protein Pnap_3967 4235185 - 4234547 - | esterase YpfH Pnap_3968 4235411 - 4235887 + | peptidylprolyl isomerase, FKBP-type Pnap_3969 4236077 - 4236367 + | hypothetical protein TERM 5109 4236628 - 4236640 + G 74 -4.7 -4.66537 | overlap 4236626 TCGGCTTCACGCTGG CCGTC GTG GTCGG TTTTCTGTTCACCGC TERM 5110 4237092 - 4237046 - g 74 -12.3 -3.4052 | gap 2, overlap 4237065 CGTCAAGGCAATCAA GC-GCGCCTGGCTGGAA-AAAGC CGC GCTCGGCTCCAGCCTGGCGCTGC TGCTGGCCGATGTGC TERM 5111 4237092 - 4237065 - g 86 -8.2 -4.56597 | overlap 4237046 GCCTGGCTGGAAAAA GCCGCGCTCGGC TCCA GCCTGGCGCTGC TGCTGGCCGATGTGC Pnap_3970 4236402 - 4237598 + | NnrS family protein TERM 5112 4237642 - 4237658 + F 72 -2.2 -4.88067 | GCCAGCGCCCGTCAA CATTGC GAAAA GCACTG TTTTTATGCCTGAAT Pnap_3971 4237858 - 4238178 + | hypothetical protein Pnap_3972 4238714 - 4238250 - | hypothetical protein TERM 5113 4239284 - 4239268 - g 82 -3.5 -5.14563 | overlap 4239271 GCCCGCAGCAAAAAA GAAGCCG CCC CGGCGGC TGAAAGCGCATCGCA TERM 5114 4239284 - 4239271 - g 93 -9.5 -4.67552 | overlap 4239268 CGCAGCAAAAAAGAA GCCGC CCCG GCGGC TGAAAGCGCATCGCA TERM 5115 4239495 - 4239438 - g 71 -5.6 -4.2828 | gap 3, overlap 4239415 4239441 CTCCATCGAGCAAAA GCAGCAGCTT-GCGGCCACCGAGCACCAG GAA CTGAAACT-GCAGGCCGCCAAACTGC-GC GAAGCCCTGGACCTG TERM 5116 4239532 - 4239520 - g 86 -6.9 -5.0133 | overlap 4239521 4239522 GACCTGGCCAAAAAA GCGCC GCA AGCGC CCGTTGCGGCCAGCA Pnap_3973 4238977 - 4239858 + | tolA protein TERM 5117 4239853 - 4239833 - f 100 -16.1 -3.49475 | overlap 4239810 CCGAGTCCGACAGAA CCGCCGCCG CCC CGGCAGCGG CCTGACCCTCCCCCC TERM 5118 4239893 - 4239924 + F 72 -12.2 -2.71712 | overlap 4239892 4239895 GCCCTCCCCGGCTGG CGGCACGCGCCG CCACACCA CGGCGCGCGCTG GTTTCCGGCCAGCAC TERM 5119 4239895 - 4239922 + F 71 -11.2 -2.90496 | overlap 4239893 4239892 CCTCCCCGGCTGGCG GCACGCGCCG CCACACCA CGGCGCGCGC TGGTTTCCGGCCAGC Pnap_3974 4240020 - 4241843 + | hypothetical protein TERM 5120 4241972 - 4241948 - g 81 -7.8 -4.4078 | TTTCTTGAATGAAAA GGGCTGGTTG AAAAA CTACCAACCC AAAAATTCAAGTGAT Pnap_3975 4241850 - 4242779 + | hypothetical protein TERM 5121 4243151 - 4243162 + G 78 -3 -5.00616 | TCGGCCAGTTCAGGC TCTA GCTA TAGA TTTTTTGCGGAAGGC TERM 5122 4243566 - 4243552 - g 95 -10 -4.61868 | opp_overlap 4243552 4243549 GAGCGATATAGAAAA CTGCGT TAA ACGCAG TAATTTCGAATTAAA TERM 5123 4243925 - 4243892 - g 86 -8.9 -4.57073 | TATTTCGTGGAAAAA GCGACAGCTCTTAAA AATC TTTACGAGCAGTCAC TATCAGAATTATGTA Pnap_3976 4242776 - 4244515 + | hypothetical protein Pnap_3977 4245302 - 4244727 - | hypothetical protein TERM 5124 4245017 - 4245057 + g 79 -8.1 -4.36411 | CGGCGGCCAGCACAT GCCGGTCGTCAGGGTCGGG TAA CTCGATGCTGTTGGCCAGC TTTTCGTAATTCGTC Pnap_3978 4245779 - 4245303 - | DNA binding domain-containing protein TERM 5125 4245598 - 4245588 - G 71 -8.2 -3.9122 | overlap 4245589 CACGTCGGCAAAGAA GCGC AAG GCGC GCGGCGGCAGTTTCA TERM 5126 4246151 - 4246173 + G 80 -15 -3.18264 | GATCACCATCTGTAA TTGTCCAGAC GCC GTCTGGACAA TTGATGCATGAAGGG Pnap_3979 4246000 - 4246275 + | hypothetical protein TERM 5127 4246472 - 4246415 - f 83 -14.6 -2.71712 | gap 3, opp_overlap 4246436, overlap 4246414 4246436 GGCCGTGCGTGAAAG CTCTATTTGGCTCGTCCAATAGGTCAGAC GCT GTCTGACCTATTGGACGAGCGA--T-GAA ACAACGAGTTATCGA TERM 5128 4246454 - 4246436 - f 84 -13.2 -3.01712 | opp_overlap 4246436, overlap 4246414 4246415 TTGGCTCGTCCAATA GGTCAGAC GCT GTCTGACC TATTGGACGAGCGAT TERM 5129 4246436 - 4246454 + F 84 -13.2 -3.01791 | opp_overlap 4246436 4246414 4246415 TTGGCTCGTCCAATA GGTCAGAC GCT GTCTGACC TATTGGACGAGCGAT TERM 5130 4246560 - 4246532 - f 74 -10.4 -3.57462 | opp_overlap 4246535, overlap 4246535 GAGCCGATTCCCAAA CAATACGGCTCA CCATT TGAGCCGCATTA TTTAAAATACGGCTC TERM 5131 4246557 - 4246535 - f 80 -9.9 -3.92542 | opp_overlap 4246535, overlap 4246532 CCGATTCCCAAACAA TACGGCTCA CCATT TGAGCCGCA TTATTTAAAATACGG TERM 5132 4246535 - 4246557 + F 71 -7.7 -3.9392 | opp_overlap 4246535 4246532 CCGATTCCCAAACAA TACGGCTCA CCATT TGAGCCGCA TTATTTAAAATACGG TERM 5133 4247702 - 4247720 + G 74 -10.2 -3.73775 | CCACGCGCGACCTGG CCGAGCTG CTG CAGCACGG TTTGCTCAGGGTCGA Pnap_3980 4246576 - 4247802 + | filamentation induced by cAMP protein Fic TERM 5134 4248843 - 4248830 - g 83 -9.5 -4.2679 | CAACCGCCAGGAAAA GCGCG GCTC CGCGC TGGTCACCATCACCA Pnap_3982 4248627 - 4248947 + | hypothetical protein TERM 5135 4248966 - 4248978 + F 83 -10.5 -4.04209 | GCACGGGCTATTTTT CCGGC TCC GCCGG TTTATCCTGATTTGA TERM 5136 4249111 - 4249090 - f 100 -7.2 -5.64274 | TGACCGACAAAAAAA CGGCGCCT TGTCCG ACGCGCCG GCCTGACCTGGAAAA Pnap_3983 4249222 - 4249641 + | hypothetical protein Pnap_3984 4249744 - 4250511 + | glutathione S-transferase domain-containing protein Pnap_3985 4251171 - 4250533 - | methyltransferase type 11 TERM 5137 4250695 - 4250666 - G 95 -9.9 -4.4009 | gap 1 TGGTAGGCGACAAAA CGCCCGCCCGGCCG CAG CACCCGGGCGA-CG GTGGCCGCCACCCGG TERM 5138 4250946 - 4250929 - G 76 -5.5 -4.57073 | opp_overlap 4250916, overlap 4250916 4250930 4250931 CATCGCCTGCAAAAA GGCGG CGGTCGTT CCGCC GGTGCCCGGCCCCAG TERM 5139 4252254 - 4252277 + G 95 -10.2 -4.42806 | ATCGTTCTGGCCTAC GGCCATGACG CGAC CGACGTGGCC TTTATTTCAGACTAC Pnap_3986 4251561 - 4252391 + | transglutaminase domain-containing protein TERM 5140 4252422 - 4252449 + T 100 -22.8 -4.56597 | opp_overlap 4252422 GCACTTCGAAAAAAA GCCCGTGGCGCA GTTT TGCGCCACGGGC TTTTTCGCAGGCGCG TERM 5141 4252449 - 4252422 - T 100 -22.8 -5.42259 | opp_overlap 4252422 GCACTTCGAAAAAAA GCCCGTGGCGCA GTTT TGCGCCACGGGC TTTTTCGCAGGCGCG Pnap_3987 4254627 - 4252471 - | putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane TERM 5142 4253647 - 4253701 + g 72 -4 -4.62783 | CGCCGCCAGCGCCGC GCCGGCGCCGTTGGACACGCTGGAGG CGA TCACGATGGTGTTCGACGGCGTGAGC TTTTTCAGGTGCGTC TERM 5143 4253928 - 4253947 + g 81 -10 -4.14392 | gap 1 TTTTTCCGGCGGCAG CGGCG-TCG GTG CGAACGCCG TTTTGCACGTTGACG TERM 5144 4254018 - 4254028 + g 86 -8.2 -4.56597 | overlap 4253989 4253989 TGTCGGTGTAGGCCA CGGC GCA GCCG TTTTTCAGGCCCCAC TERM 5145 4255157 - 4255187 + G 75 -12.4 -3.54543 | CGATGCCGACGCCAT GCGCGCGCTGGCCG ACG CCGCCATCGAGCGC TTTGGCCACATCGAT TERM 5146 4255230 - 4255217 - g 71 -9.5 -3.71848 | TGTCTGGATCAACAA CGCCG GCAC CGGCG CGGTCGGCGCCTTCG TERM 5147 4255316 - 4255330 + G 70 -7.8 -4.07568 | CCTCAACGGCGCGCA TGCGGT GCT GCCGCA TTTTCGAAAGCAGGG Pnap_3988 4254750 - 4255964 + | short-chain dehydrogenase/reductase SDR TERM 5148 4255982 - 4256019 + T 93 -12.8 -3.95584 | gap 1, opp_overlap 4255984 ATGCTCTGTTTTTAA TAGCT-GCCTGCGCACG CTGGA CGTGCGCAGACTGGCTA TTTGGTTCATAAACC TERM 5149 4256016 - 4255984 - T 76 -11.9 -3.01712 | opp_overlap 4255982 GCTCTGTTTTTAATA GCTGCCTGCGCACGC TGG ACGTGCGCAGACTGG CTATTTGGTTCATAA Pnap_3989 4256914 - 4256132 - | short-chain dehydrogenase/reductase SDR TERM 5150 4257219 - 4257203 - g 73 -3.5 -4.67904 | overlap 4257204 CAGCAACTCGAAAAA CGCCTGG GCA CCCGGCT GCTGCACCGCACGAC TERM 5151 4257627 - 4257648 + G 81 -2.1 -5.24129 | overlap 4257631 4257634 4257635 ACACCGTCGAGGCCT TGCGCGGCC ACCA GGCGGTGAA TTTTTTATCGCCCCA TERM 5152 4257668 - 4257681 + G 79 -8.1 -4.30416 | TTATCGCCCCAGGAC GGCAG GCCA CTGCC TTTTGAATTCCTCAT Pnap_3990 4257077 - 4257973 + | LysR family transcriptional regulator TERM 5153 4258217 - 4258244 + G 72 -4 -4.62069 | overlap 4258222 4258230 AGCCCTACCTGTTTT TCGACGGCCGCT GCGA GGAGGCCCTTGA TTTTTACCGTGCCGC Pnap_3991 4258147 - 4258614 + | 3-demethylubiquinone-9 3-methyltransferase TERM 5154 4258675 - 4258636 - T 100 -15.6 -3.55444 | gap 1, opp_overlap 4258635, overlap 4258640 CGCTCAGCGGCTAAA GCCACCCGCCAGCGGC-GG CAA CCAGCCGCCGGCGGGAATC CTGCGTTGCGCAGGA TERM 5155 4258671 - 4258640 - T 100 -21.6 -2.64472 | gap 1, opp_overlap 4258635, overlap 4258636 CAGCGGCTAAAGCCA CCCGCCAGCGGC-GG CAA CCAGCCGCCGGCGGG AATCCTGCGTTGCGC Pnap_3992 4259068 - 4258697 - | triple helix repeat-containing collagen TERM 5156 4260468 - 4260414 - g 89 -17.1 -3.14132 | overlap 4260427 GGCGGCGCCGAGGAA CGGCCCGCCGAAAGCGCCGCGGCC-AG CGA CTCGGCAACGGC-CTGACGGCGGGCCA TAGCCTCCAGCCGCA Pnap_3993 4259358 - 4260458 + | pirin domain-containing protein TERM 5157 4260897 - 4260883 - g 74 -5.7 -4.4648 | AGCCGCACCAGAAAA TGGTC CTCCT GACCA ACTACGCCACGCCGG Pnap_3994 4260639 - 4261079 + | response regulator receiver protein TERM 5158 4261087 - 4261116 + F 75 -4.1 -4.88228 | opp_overlap 4261084, overlap 4261062 4261090 4261090 CGAACTAGCAAAGGG CGCGGTGGTTGCC CAAA GGCATCCAGCCTG TTTTTGCTATTAAAT TERM 5159 4261211 - 4261196 - f 72 -3.9 -4.7497 | overlap 4261197 4261199 TTGATTTATCAAAAA CCAGG CCGCTT CCCGG CCAGCCCGATCCCCC TERM 5160 4261399 - 4261381 - g 83 -12.4 -4.09685 | overlap 4261393 CGCCAGCGCGCAAAA GCCTGCGC AAG ACGCAGGC CCCGGGGCCTGCGCC TERM 5161 4261412 - 4261393 - g 78 -15 -3.0264 | overlap 4261381 AAAGCCTGCGCAAGA CGCAGGCC CCGG GGCCTGCG CCGTCCCGCACCAAC TERM 5162 4261897 - 4261907 + G 72 -2.4 -4.72846 | TTCACGCCTCGATCT CGGC GCT GACG TTTTTCAATGTCTCC Pnap_3995 4261305 - 4262036 + | TetR family transcriptional regulator Pnap_3996 4262110 - 4262556 + | 3-dehydroquinate dehydratase Pnap_3997 4263339 - 4262581 - | hypothetical protein TERM 5163 4262810 - 4262797 - G 74 -9.5 -3.83026 | GTCCGCCACATCAAA GCCGC TGCT GCGGC GCGCAATGACGCCGT TERM 5164 4262957 - 4262942 - G 74 -5.4 -4.6644 | overlap 4262943 AAGAGATTGCAAAAA GCCATG CCGC CATAGC GTGCGCCGTCATGGT TERM 5165 4263956 - 4263946 - g 72 -2.4 -4.6902 | opp_overlap 4263952, overlap 4263938 TCAGAAGGCCAAAAA CCTG GCG CTGG ATGATCGGCTTTCAC Pnap_4000 4263776 - 4264228 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Pnap_4001 4266526 - 4264289 - | heavy metal translocating P-type ATPase TERM 5166 4264643 - 4264660 + g 73 -3.4 -4.72272 | gap 1, overlap 4264641 GTACTGGCCTTGCAG CT-GCCG GATGG CGGCCAG TTTTTCCTCGGGCAG TERM 5167 4264709 - 4264736 + g 93 -18.4 -3.30124 | opp_overlap 4264699 AATGATGCCGGCCTG CGCCGCCACCGC GCTG GCCGTGGCGGCG TTGTCGCCGCTGAGC TERM 5168 4265981 - 4265951 - G 73 -13.2 -3.21099 | opp_overlap 4265951 4265952, overlap 4265952 CTGGCCGATCAGGAA GGCGCCGGTGACGG CCA CCGTCATCAGCGCA TTGATGTTGAGCCGG TERM 5169 4265951 - 4265981 + g 74 -13.2 -3.36273 | opp_overlap 4265951 4265952, overlap 4265952 CTGGCCGATCAGGAA GGCGCCGGTGACGG CCA CCGTCATCAGCGCA TTGATGTTGAGCCGG TERM 5170 4265952 - 4265980 + g 80 -16.7 -2.6155 | opp_overlap 4265952 4265951, overlap 4265951 TGGCCGATCAGGAAG GCGCCGGTGACGG CCA CCGTCATCAGCGC ATTGATGTTGAGCCG TERM 5171 4265980 - 4265952 - G 79 -16.7 -2.52516 | opp_overlap 4265951 4265952, overlap 4265951 TGGCCGATCAGGAAG GCGCCGGTGACGG CCA CCGTCATCAGCGC ATTGATGTTGAGCCG TERM 5172 4266008 - 4266019 + g 70 -7.2 -3.96624 | opp_overlap 4266008 CCGGCGCCTGAACAA GGCC GTGA GGCC TTTCTGGTACACCTC TERM 5173 4266639 - 4266619 - g 70 -10.3 -3.57144 | CGCCTGATCGGGAAA GCCGCCGCC CTG AGCGGCGTC AGCGCCGCCAACATC TERM 5174 4266983 - 4266965 - g 79 -9.6 -4.13767 | GGCCGCAGTGCAAAA TCATGCAG GCG CTGCACGA CCGCGCCGCGCACCT Pnap_4002 4266583 - 4267041 + | MerR family transcriptional regulator Pnap_4003 4268272 - 4267070 - | major facilitator superfamily transporter TERM 5175 4268255 - 4268237 - G 85 -14.6 -3.59979 | CGTTCCGATGGCAAA GGCGCTGA TGG TCAGCGCC AGAAGGGCAATGGGC TERM 5176 4268578 - 4268552 - g 77 -4.2 -4.82901 | overlap 4268554 CCGGCTGGAGAAAAA GCTCGGCACCAC GCT GCTGCGCCGCAC TACGCGGCGGCTGGA Pnap_4004 4268421 - 4269308 + | LysR family transcriptional regulator TERM 5177 4269443 - 4269495 + G 73 -6.6 -4.35926 | gap 1 GGCGCCAGCGCGCAA CCGGCGCCGCCCAGCCTCCAGCCCG ACAG CGGGCCGT-GGAAAAGCGGCGCGGG TTTTGACTTTGACCT Pnap_4005 4269356 - 4270468 + | hypothetical protein TERM 5178 4270519 - 4270532 + T 82 -5.3 -5.09895 | opp_overlap 4270517 4270519 GGTATTGCGCAAACA GCATT TTTT AATGC TTTTTTCGATAACTA TERM 5179 4270767 - 4270742 - T 91 -9.6 -4.5442 | opp_overlap 4270743, overlap 4270737 GCGGGAAGGAGAAAA CCGGGGGCCG CGCTTT CAGCCCCAGG CCAGCAATGCGGCGC Pnap_4006 4270993 - 4270757 - | hypothetical protein TERM 5180 4271191 - 4271163 - g 78 -6.6 -4.58395 | gap 1, overlap 4271164 TCTACTCGTCAAAAA CGCCAG-CCTGCC CGAT GGCCGGACCGGCA TCTCAATGGCCGTGC Pnap_4007 4271140 - 4272414 + | cytosine deaminase Pnap_4008 4273151 - 4272489 - | transposase Pnap_4009 4273621 - 4273148 - | transposase Pnap_4010 4273692 - 4274552 + | hypothetical protein TERM 5181 4275607 - 4275627 + G 75 -11.8 -3.54129 | CTTCCTGAGCGCGCG CCGGCTGG CCGAC CCGGCCGG TTTCGCCGACCTGTC Pnap_4011 4274678 - 4276150 + | exoribonuclease II Pnap_4012 4276274 - 4276549 + | hypothetical protein TERM 5182 4276826 - 4276816 - g 100 -6.8 -5.52986 | overlap 4276821 4276824 ACCCCATGAAAAAAA CCCA AGA TGGG ACGCGAGCACGCGCT TERM 5183 4276831 - 4276853 + G 78 -10.5 -3.97947 | opp_overlap 4276824 4276821 CCCAAGATGGGACGC GAGCACGCG CTGCC CGCGCGCTC TTTATCGTCGCTGCC Pnap_4013 4276806 - 4278422 + | polypeptide-transport-associated domain-containing protein TERM 5184 4278662 - 4278652 - g 73 -6.8 -4.25104 | CTTCGTCCAGCAAAA CGCT GCG AGCG CGGTGCTCAACCGCA Pnap_4014 4278440 - 4281310 + | filamentous haemagglutinin outer membrane protein TERM 5185 4281697 - 4281725 + G 76 -7.3 -4.36914 | overlap 4281698 TGCGGGCGGGACCAC CGTTGACGCCGGC ACC GCCAGCTTCAACC TTTTCTACCGGCCCG Pnap_4015 4281323 - 4282174 + | hypothetical protein TERM 5186 4282194 - 4282183 - T 77 -7.2 -4.27316 | GCGCTGAACCCAAAA GCGC TCCC GCGC CCAAGCGGCTCACGA Pnap_4016 4283174 - 4282221 - | 2-dehydropantoate 2-reductase TERM 5187 4282726 - 4282741 + g 70 -10.4 -3.64822 | overlap 4282699 CCGTGGTGCCTGACG TGGCCG GGGC CGGCCA TTTCGGTGGCGACGT TERM 5188 4282808 - 4282824 + g 76 -9.4 -4.09685 | opp_overlap 4282763, overlap 4282781 4282798 CGCTACGCAGCCGCT CGGCGT TGTCC ACGCCG TTTTGCAGGCTCAGC TERM 5189 4282924 - 4282971 + g 70 -11.9 -3.1372 | gap 2, opp_overlap 4282916 4282919, overlap 4282920 CAGAACAGCACCAGT TGCGCGCCTTG-CGCC-GCGCCG GGTT CGGTGCTGGCGGCCAGGCGCACC TGTTCGTCAAAGGTC Pnap_4017 4283305 - 4283619 + | hypothetical protein TERM 5190 4283658 - 4283647 - g 76 -5.8 -4.57837 | opp_overlap 4283649, overlap 4283648 4283649 ACAGCCGCCGAAAAA CTGG GCAT CCAG CCCTTCGATGCCGCC Pnap_4018 4283623 - 4283943 + | putative transcriptional regulator TERM 5191 4284901 - 4284888 - g 75 -3.7 -4.68593 | TCCAGCACCCAAAAA CTCGG CGTT CCGGG CGAAGACCTGGCCGG Pnap_4019 4284159 - 4285505 + | putative oxidoreductase TERM 5192 4286340 - 4286298 - g 79 -14 -3.53563 | overlap 4286286 4286299 ACATGGTCGCCGAAA TCGCCCGCGACCCGCAGACC GCC GGCCTGCCGATCTCGGGCAT AGGCGGCGTGGGCAG TERM 5193 4286339 - 4286299 - g 84 -17.5 -2.71924 | overlap 4286286 4286298 CATGGTCGCCGAAAT CGCCCGCGACCCGCAGACC GCC GGCCTGCCGATCTCGGGCA TAGGCGGCGTGGGCA Pnap_4020 4285556 - 4286863 + | dihydropyrimidine dehydrogenase TERM 5194 4288097 - 4288077 - g 72 -3.9 -4.60041 | opp_overlap 4288086 ATCTACCCGCAAAAA GGCAGCG TGTCGGT CGGTGCC GACGCCGACCTGGTG Pnap_4021 4286928 - 4288373 + | dihydropyrimidinase Pnap_4022 4288398 - 4289654 + | amidase Pnap_4023 4289768 - 4291231 + | hypothetical protein Pnap_4024 4291549 - 4291725 + | hypothetical protein TERM 5195 4292144 - 4292129 - f 81 -2.4 -5.35815 | overlap 4292131 4292139 CATAGCAAACAAAAA CCCCGC AACA GCAGCG CCACCCCACACCCGG TERM 5196 4292342 - 4292365 + G 71 -6 -4.36914 | gap 1, opp_overlap 4292341 4292344, overlap 4292345 CCCCTAACCGAAGAC CACCTTGCCCG GCT CGTGCAAG-TG TTTTATGAGCGCGCC Pnap_4025 4292306 - 4292692 + | globin family protein Pnap_4026 4293106 - 4292732 - | hypothetical protein Pnap_4027 4293986 - 4293501 - | calcium/calmodulin dependent protein kinase II association-domain-containing protein Pnap_4028 4294674 - 4294144 - | 3-demethylubiquinone-9 3-methyltransferase Pnap_4029 4296168 - 4294900 - | cytochrome P450 TERM 5197 4295911 - 4295896 - G 70 -7.6 -4.07885 | CAGCGCGCGCGAAAA CAGCTT TTGA AAGCTG CTCAGCTCGCCCGGC Pnap_4030 4297205 - 4296168 - | biotin synthase TERM 5198 4296865 - 4296855 - G 76 -8.2 -4.18018 | opp_overlap 4296834, overlap 4296856 CGCGCCCATGCAAAA GCGC GTC GCGC CCTGGTCCTTGGCGG TERM 5199 4297255 - 4297236 - R 100 -10 -4.97312 | overlap 4297237 AAAATGAATGAAAAA CGCTCAGC GGGG GCTGAGCA GCTTGGCCAGCGCGG TERM 5200 4297254 - 4297237 - R 77 -11.3 -3.55947 | overlap 4297236 AAATGAATGAAAAAC GCTCAGC GGGG GCTGAGC AGCTTGGCCAGCGCG Pnap_4031 4297961 - 4297239 - | dethiobiotin synthase TERM 5201 4297342 - 4297296 - G 75 -13.7 -3.08073 | gap 1, opp_overlap 4297339, overlap 4297328 ATGAGCGGCAATATA CGCCG-GCCCGGGCACGGCC AGCCGGGG AACCACGCCCAGGCACGGCG CCTGGTGGCGGCGCA TERM 5202 4297660 - 4297674 + g 76 -9.2 -4.07568 | CGGACCAGCCCGGGG CCGTCG ATC CGGCGG TTTTCCAGCGCGGCG Pnap_4032 4299190 - 4297958 - | 8-amino-7-oxononanoate synthase TERM 5203 4298247 - 4298275 + g 72 -11.8 -3.34013 | gap 1, opp_overlap 4298212, overlap 4298257 AGCTCGGCGAGCTGG CTGC-GCAGCTGG CTGA TCAGCTGCTGCAG TTGCTTGCGCCGCTG TERM 5204 4298828 - 4298788 - G 74 -4.7 -4.56597 | overlap 4298790 GCTTGTCGGCAAAAA TCGTGGCGTTGGCG-CCGC CCAGC GCGGTCAGCAGCGCCA-GA TTGGCCATGTAGCCG TERM 5205 4299094 - 4299047 - G 88 -16.3 -3.28712 | gap 2 GTCGTTGCTGCAGAA CGCCAGCAGGTC-GCGCGC-CGG CTGG CCGCGCTGGCTGACCCGCTGGCG CGGCGCGCACGGCGA TERM 5206 4299633 - 4299582 - R 74 -4.3 -4.74103 | gap 2, overlap 4299584 4299620 GTGCGAATGCAAAAA GCCGCGCGCCACGTCGTCGTCGAGG AAGG CCTCGTAAATG-C-TGTCGCGCGAC AGCACCAAGGAGAGC TERM 5207 4299637 - 4299620 - R 71 -9.9 -3.54459 | overlap 4299582 GGAAGGCCTCGTAAA TGCTGTC GCGC GACAGCA CCAAGGAGAGCGGCA TERM 5208 4299763 - 4299744 - R 90 -5.6 -5.15969 | overlap 4299745 4299746 CTCGAAGGCAAAAAA GCTGCCAG TGCG CCCGCAGC CCACGGCAATCTCGT TERM 5209 4300262 - 4300212 - R 75 -6 -4.56597 | gap 1, overlap 4300215 4300216 GTCGCTGGCGAAAAA GCAGTGGCCCAGCACGCCGCCGG TCAGCG CCGACAGC-CGCTCGGCCAGCTC GACCGCCGGCGCGTG TERM 5210 4300258 - 4300216 - R 71 -12 -2.53903 | gap 1, overlap 4300215 4300212 CTGGCGAAAAAGCAG TGGCCCAGCACGCCGCCGG TCAGCG CCGACAGC-CGCTCGGCCA GCTCGACCGCCGGCG Pnap_4034 4301395 - 4300919 - | putative transposase of insertion sequence ISRm10-1 Pnap_4035 4301873 - 4301415 - | hypothetical protein Pnap_4036 4302224 - 4301949 - | hypothetical protein Pnap_4037 4303185 - 4302526 - | TetR family transcriptional regulator Pnap_4038 4304275 - 4303280 - | LysR family transcriptional regulator TERM 5211 4303635 - 4303593 - G 83 -17.6 -2.52543 | AGTCCGGCGAACGCA TGCGCCCGCAAGCCGGCCCA GTC CAGCCCGGCCTGCGGACGCG CAAACAGCGGATGCG TERM 5212 4304052 - 4304012 - G 75 -11.8 -3.59979 | gap 2, opp_overlap 4304013 4304038, overlap 4304013 CGGGGTCAGCGCAAA GCCGGCCCG-CCCG-CGCCG GCA CAGCGTCAGGCCGAGCCGGA TTTCCAGGTCCTTGA TERM 5213 4304051 - 4304013 - G 78 -15.3 -2.75844 | gap 2, opp_overlap 4304013 4304038, overlap 4304012 GGGGTCAGCGCAAAG CCGGCCCG-CCCG-CGCCG GCA CAGCGTCAGGCCGAGCCGG ATTTCCAGGTCCTTG TERM 5214 4304800 - 4304777 - g 70 -7.4 -4.08394 | ACACCTCGCTGAAAA TGGCGCGC GCCTACTG GCGCACCA AGGGTCTGGCCAGCA TERM 5215 4304969 - 4304958 - g 93 -7.2 -5.08601 | overlap 4304959 CCAGCTCAAGAAAAA CGCG TTCT CGCG CGGCATGCCGGCCGA Pnap_4039 4304383 - 4305732 + | beta alanine--pyruvate transaminase Pnap_4040 4306250 - 4307410 + | ABC-type sugar transport system periplasmic component-like protein TERM 5216 4308244 - 4308218 - g 78 -10.1 -4.08216 | gap 1 TCATGGGCGCCAAAA GCTGGGCCAGGC TCAC GCC-GGCGCAGC AAACCATCGTGCGCG Pnap_4041 4307485 - 4308480 + | TRAP dicarboxylate transporter, DctP subunit Pnap_4042 4308570 - 4309562 + | TRAP dicarboxylate transporter, DctP subunit Pnap_4043 4309559 - 4310542 + | TRAP dicarboxylate transporter, DctP subunit TERM 5217 4311864 - 4311922 + G 71 -13.8 -2.60508 | overlap 4311906 GCTGCGCACCTCGCG CGCCCAGGGGCTGTCGCGGGC-GGTGCA GCTGA TGCACGAGCACGCGGCCGACC-TGGGCG AGTTTTTGACCCGTG Pnap_4044 4310629 - 4312587 + | integral membrane sensor signal transduction histidine kinase TERM 5218 4312677 - 4312700 + G 100 -3.9 -5.52384 | overlap 4312682 CGGCACCTCATTCAC CAGGATCAG GCGCAA CTGATTTTG TTTTTTTGCTCCGCA TERM 5219 4312682 - 4312695 + G 93 -2.4 -5.57888 | overlap 4312677 CCTCATTCACCAGGA TCAG GCGCAA CTGA TTTTGTTTTTTTGCT Pnap_4045 4312584 - 4313720 + | hypothetical protein TERM 5220 4314497 - 4314551 + G 75 -15 -2.70532 | overlap 4314496 TGCGCACCTCGCGCG CCCAGGGGCTGTCGCGGGCG-GTGCA GCTGA TGCACGCGCACGCGGCCGACC-TGGG TGAATTTCTGACCCT Pnap_4046 4313707 - 4315218 + | PAS/PAC sensor signal transduction histidine kinase TERM 5221 4316407 - 4316423 + G 74 -5.8 -4.41494 | gap 1, overlap 4316373 GGGCCGATTCCAGAC CG-GGCG AAGG CGCCACG TTTTACTTCACGATA Pnap_4047 4315215 - 4316510 + | response regulator receiver sensor signal transduction histidine kinase TERM 5222 4317534 - 4317552 + G 72 -8 -4.15453 | overlap 4317535 CAGCCATCTACTTCA TCCGCGAC AAC GGCGCGGG TTTTGACATGGCTTA Pnap_4048 4316507 - 4317802 + | response regulator receiver sensor signal transduction histidine kinase Pnap_4049 4317799 - 4319460 + | multi-sensor signal transduction histidine kinase TERM 5223 4319558 - 4319571 + G 76 -9.5 -4.07568 | GTTTCGCCCGAGCAC GCGGC GCGC GCCGC TTTTGGGCGCCGCAC TERM 5224 4319697 - 4319669 - g 72 -2.3 -4.79826 | overlap 4319670 4319687 AGACACGAGCAAAAA GCGCATCGGATTC AGC AATTCCTATGCGG GAAACTCTTTCAGGC Pnap_4050 4319520 - 4320632 + | putative ABC transporter TERM 5225 4320705 - 4320735 + G 83 -7.4 -4.67353 | overlap 4320692 ACGTCCGCCAGCACT TCGGAGCCGTCCAG GCG CTGGCCGGAATCGA TTTTTCCGTCGCTCC TERM 5226 4321428 - 4321456 + G 75 -11.6 -3.63627 | opp_overlap 4321428, overlap 4321430 GCAGGCCCGAAGCCA TCCGGGCGCAGC CGGCC GCCGCGCCCGTA TTTCAACTGTCCGGC TERM 5227 4321456 - 4321428 - g 71 -13.8 -2.52896 | opp_overlap 4321428 4321430 GCAGGCCCGAAGCCA TCCGGGCGCAGC CGGCC GCCGCGCCCGTA TTTCAACTGTCCGGC TERM 5228 4321430 - 4321454 + G 83 -14.2 -3.39844 | opp_overlap 4321428, overlap 4321428 AGGCCCGAAGCCATC CGGGCGCAGC CGGCC GCCGCGCCCG TATTTCAACTGTCCG TERM 5229 4321593 - 4321646 + G 71 -12.9 -3.05521 | gap 1, opp_overlap 4321589 4321588, overlap 4321626 CCAGCATGAAGCGGC GGCGTGCAGGGCCGCCGGTCGCCTAC GTG GCCGGCGACCGGCAGGCC-GAAGGCC TGTTCCCGCTGTGGT Pnap_4051 4320629 - 4322116 + | ABC transporter related TERM 5230 4322924 - 4322942 + G 72 -7.4 -4.18197 | CTCGCCCGTCGGCGT CGTGATCG GCG CGATGACG TTTTCCCTGGCGGCT Pnap_4052 4322109 - 4323068 + | inner-membrane translocator TERM 5231 4323533 - 4323498 - g 75 -14 -3.05384 | gap 1 TGGGCGGGGAGGCAA CCGTCAA-GCCGCCGGC CCT GCTGGCCGCCTTGACGG TGCAACGCGTTGCCG Pnap_4053 4323104 - 4324009 + | inner-membrane translocator TERM 5232 4328433 - 4328423 - g 73 -6.8 -4.25104 | GCTGCTGTACGAAAA GCTG GAG CAGC GCGTGCGCGAAAAAA TERM 5233 4328465 - 4328449 - g 93 -7.2 -5.00616 | GCGTGCGCGAAAAAA CCCGCG AGCTG CGCGAG ACCCAGGCCAAACTC Pnap_4054 4324044 - 4329314 + | ATPase domain-containing protein TERM 5234 4329526 - 4329581 + T 73 -10.4 -3.33696 | opp_overlap 4329533 4329534 4329547, overlap 4329529 4329547 AGGCGCAGGCCGAAA CCTCAAACGCCCAATAAAAAAGCGCC CGAA GGCGCTTTTTTATTGGGCAGCAGTGC TTACTTGGCCACGAC TERM 5235 4329529 - 4329578 + T 83 -15.1 -2.84098 | opp_overlap 4329533 4329534 4329547, overlap 4329526 4329547 CGCAGGCCGAAACCT CAAACGCCCAATAAAAAAGCGCC CGAA GGCGCTTTTTTATTGGGCAGCAG TGCTTACTTGGCCAC TERM 5236 4329574 - 4329533 - T 100 -25.5 -3.71649 | opp_overlap 4329529 4329526 4329547, overlap 4329534 4329547 GGCCGAAACCTCAAA CGCCCAATAAAAAAGCGCC CGAA GGCGCTTTTTTATTGGGCA GCAGTGCTTACTTGG TERM 5237 4329573 - 4329534 - T 100 -26.8 -2.82668 | opp_overlap 4329529 4329526 4329547, overlap 4329533 4329547 GCCGAAACCTCAAAC GCCCAATAAAAAAGCGCC CGAA GGCGCTTTTTTATTGGGC AGCAGTGCTTACTTG TERM 5238 4329547 - 4329560 + T 100 -9.5 -5.4505 | opp_overlap 4329534 4329533 4329547, overlap 4329529 4329526 ACGCCCAATAAAAAA GCGCC CGAA GGCGC TTTTTTATTGGGCAG TERM 5239 4329560 - 4329547 - T 100 -9.5 -5.45652 | opp_overlap 4329547 4329529 4329526, overlap 4329534 4329533 ACGCCCAATAAAAAA GCGCC CGAA GGCGC TTTTTTATTGGGCAG Pnap_4055 4330580 - 4329582 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 5240 4330031 - 4330071 + g 70 -11.9 -3.16055 | gap 2, overlap 4330055 4330055 CGTCAACGGTCTTTT GCGTGGCC-G-TGGCCGCG TGAAC CGTGGTCATCAGGCCGCGC TTGATGCCCCATTTG TERM 5241 4330639 - 4330615 - R 84 -13.5 -3.06261 | opp_overlap 4330630 4330630 GGTTAACTTGCAACA CCCTCCGGCCG GAT CGGCCGGAACG GCACTTATTTCTTGC Pnap_4056 4332689 - 4330644 - | transketolase TERM 5242 4333217 - 4333182 - g 70 -10.2 -3.53811 | opp_overlap 4333177 4333197 4333209 GCTACGCGCTGGAAA CCGCCGGCGGCATCGC GCGT GCGCTGCCGCTGCTGG GCGACGTGTTCTGGC Pnap_4057 4332893 - 4333630 + | nucleotidyl transferase TERM 5243 4333902 - 4333877 - g 76 -5.5 -4.62336 | gap 1 AGGCCAGCGGAAAAA CCGTCAAAAGCA CGC TG-TTTTGCCGG CCAAAGGATCTGGAG TERM 5244 4334727 - 4334689 - g 74 -5.3 -4.56597 | opp_overlap 4334699 4334723, overlap 4334691 GGCTTGCTGCAAAAA GCCAAACACG-GCAGCGTC GAT GACG-TGCTCGCTTCCGGC GCCTACCGCCAGTTC TERM 5245 4334845 - 4334832 - g 72 -3.7 -4.63218 | overlap 4334835 4334836 GCCGCGCGAAGAAAA GGACG CGCT CGGCC AGAAGGTCATGCGCA Pnap_4058 4333645 - 4335066 + | peptidase M24 Pnap_4059 4335118 - 4335510 + | glutaredoxin TERM 5246 4335530 - 4335580 + T 100 -28.4 -3.39068 | overlap 4335530 4335531 GCTGGCCTGCGGTAG TCACGCCTTGCCGGCCCATGGC CTCAAGC GCCATGGGCCGGCAAGGCGAGC ATTTTCTTCAGCTCG TERM 5247 4335530 - 4335581 + T 100 -26.8 -4.65916 | gap 1, overlap 4335530 4335531 GCTGGCCTGCGGTAG T-CACGCCTTGCCGGCCCATGGC CTCAAGC GCCATGGGCCGGCAAGGCGAGCA TTTTCTTCAGCTCGC TERM 5248 4335531 - 4335579 + T 100 -31.9 -2.62958 | overlap 4335530 4335530 CTGGCCTGCGGTAGT CACGCCTTGCCGGCCCATGGC CTCAAGC GCCATGGGCCGGCAAGGCGAG CATTTTCTTCAGCTC Pnap_4060 4335936 - 4335553 - | glutaredoxin TERM 5249 4335770 - 4335780 + g 86 -6.8 -5.00616 | overlap 4335755 CCTGCCTGGTCCAGC GCCT TGC AGGC TTTTTTGGGAAAAGG TERM 5250 4336202 - 4336182 - H 80 -8.9 -4.11751 | overlap 4336185 ATTAAGCTGGCAAAA GACCCGGCA GCC TGCCGGTCC AACACAAGGAGTTTC Pnap_4061 4336221 - 4336658 + | signal-transduction protein Pnap_4062 4337453 - 4336695 - | ABC transporter related TERM 5251 4337465 - 4337483 + r 70 -5.2 -4.41895 | overlap 4337466 TCATGGGGTGTTGGG TTCAGCGC CTG GGGCTGAG TTTTCGTTCAAGGTT Pnap_4063 4338116 - 4337466 - | polar amino acid ABC transporter, inner membrane subunit TERM 5252 4337974 - 4337954 - G 71 -12.5 -2.99649 | overlap 4337943 ACACCTGCACATACA GCGCAACGC AGC GCGCCGCGC CCGGCAGCTTCGAGA TERM 5253 4338201 - 4338152 - R 80 -9.8 -3.92324 | gap 1 GGGCCGAATATGAAA CGCGGCCCGGCCCAG-TGGAGCA CTTGC CGCACCAGCACGGCCAGGCCGAG GTAAACCAGCGTCAC Pnap_4064 4338789 - 4338133 - | polar amino acid ABC transporter, inner membrane subunit TERM 5254 4338845 - 4338893 + r 71 -9.5 -3.53444 | gap 1, opp_overlap 4338857 GTGAAGGCGCAATGT GCGGAGGGATAAGCCGGGCCGT TCATGC ACGGCC-GGCTGGTCCTCGCGC TTGCTTATTCCGGAA Pnap_4065 4339692 - 4338898 - | extracellular solute-binding protein TERM 5255 4340090 - 4340136 + G 78 -7.1 -4.57073 | gap 2, opp_overlap 4340071 TGGCCTATTCGGCCA CCGAGCTG-GCCGGCC-TGGCCG GCG CCTCCAAGGCCAGCGCGGCACGG TTTTTCCAGCGCCTC Pnap_4066 4339915 - 4340826 + | RpiR family transcriptional regulator Pnap_4067 4340848 - 4342071 + | diaminopropionate ammonia-lyase TERM 5256 4342788 - 4342813 + G 75 -3.9 -4.71828 | gap 1, overlap 4342790 CTGCGCCATGACGCG GGCGTGGTGGCG GTG CGC-ATCGCGGC TTTTGTTCATGACCT TERM 5257 4343247 - 4343270 + G 73 -13.2 -3.15861 | gap 1, overlap 4343260 4343261 4343263 TTCACCGAGCCCGAC GACCTG-GCGC AGG GCGCGCAGGTC TTGCTGCAGGTGCTG Pnap_4068 4342068 - 4343312 + | allantoate amidohydrolase Pnap_4069 4343352 - 4344317 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase putA 4348458 - 4344490 - | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 5258 4344518 - 4344533 + g 70 -11.8 -3.18023 | overlap 4344516 ATGAGCTGCGCGTTG CCGCCG GCTG CGGCGG TGTTGGTGCTGATGC TERM 5259 4344777 - 4344754 - G 71 -8.8 -3.89346 | gap 1 GCGTGACTCGACAAA GCCCTGC-GCC TCG GGCGGCAGCGC GGCCAGCGCCTGCGC TERM 5260 4346141 - 4346100 - G 75 -14.3 -2.72991 | gap 1, overlap 4346090 TCACACCGGCAACCA GCGGCGTCTGCTCGGCCGGC TTG GCCAG-CGCGCAGTTGCCGC TGGCCAGCGCGGCGG TERM 5261 4348569 - 4348601 + H 81 -12.1 -3.48924 | GCGTGACTGTGGACA TGGGTTGCACCTTTT AAA AATAAGTGCAACCCA TTCTATAAAAGGTAC TERM 5262 4348918 - 4348898 - g 91 -9.6 -4.42238 | CGAGCGCAACGAAAA GCGCGCCG AACTG CGCCGCGC CGCGCTGGAATACCA TERM 5263 4349470 - 4349457 - g 77 -2.4 -5.07053 | AAGGATCCGAAAAAA GTCA AGCTCG TGAC CTCCGGCGCGGGTGC Pnap_4071 4348842 - 4351172 + | malic enzyme TERM 5264 4351220 - 4351203 - f 85 -11.3 -3.95584 | opp_overlap 4351203 GCGTTACCAAGTAAA GAGGGCT TTAG AGCCCTC TTTTTAATGCCTAAA TERM 5265 4351203 - 4351220 + F 100 -11.3 -4.7497 | opp_overlap 4351203 GCGTTACCAAGTAAA GAGGGCT TTAG AGCCCTC TTTTTAATGCCTAAA TERM 5266 4351337 - 4351353 + F 70 -6.5 -4.08216 | AGTGAGCGGCCAGTC CCAGGGT TCA GCTCTGG TTTTGGCGAGCCTCC Pnap_4072 4351669 - 4352094 + | hypothetical protein Pnap_4073 4352318 - 4352079 - | hypothetical protein TERM 5267 4352303 - 4352289 - G 100 -11.4 -5.26316 | opp_overlap 4352289, overlap 4352261 GCATCCCATAAAAAA CCCGCA ACT TGCGGG TTTTTTTACGATCAA TERM 5268 4352289 - 4352303 + g 100 -11.4 -5.44119 | opp_overlap 4352261 4352289 GCATCCCATAAAAAA CCCGCA ACT TGCGGG TTTTTTTACGATCAA Pnap_4074 4353203 - 4352364 - | dimethyladenosine transferase Pnap_4075 4354609 - 4353200 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 5269 4353722 - 4353701 - G 70 -10.1 -3.62096 | gap 1, opp_overlap 4353708 CTTCAGGATGTGAAA CCCGGCGGCG CTG CGC-ACCGGG CCGGCCAGGCCGCCC TERM 5270 4354348 - 4354370 + g 76 -13.4 -3.15579 | overlap 4354356 4354359 TGCTCTGCTGCTTGA GCTGCTGCTC GGT GCGCAGCAGC TTGGTGCGCACTTCA TERM 5271 4354359 - 4354381 + g 75 -12 -3.56544 | overlap 4354348 4354356 TTGAGCTGCTGCTCG GTGCGCAGCA GCT TGGTGCGCAC TTCATTGTTGGTGAT Pnap_4076 4357046 - 4354602 - | organic solvent tolerance protein TERM 5272 4355465 - 4355455 - G 77 -2.4 -4.96848 | GTGCGCACATAAAAA GCGC GCG GCTC CAGCGTCTGGGTAAA TERM 5273 4355783 - 4355761 - G 93 -13.4 -4.21194 | GCGGACCAGTCAAAA CCGCTGCCCA GCC CGAGCAGCGG GGCATCGACACGGGT TERM 5274 4357256 - 4357277 + G 70 -10.1 -3.58329 | GCCCGATACCGTCCG GCTGGCCTC GGCC GATGCCAGC TTTCGGCGCTATTTC Pnap_4077 4357149 - 4358231 + | aminoglycoside phosphotransferase TERM 5275 4358834 - 4358813 - g 72 -4.3 -4.64334 | gap 1, opp_overlap 4358830, overlap 4358816 4358817 4358825 AATGGCTGAAGAAAA GCA-CGGCGG AAA CCGGCGCCGC CGCCAGCAACGGCAT Pnap_4078 4358323 - 4359075 + | hypothetical protein TERM 5276 4359078 - 4359111 + T 85 -4.6 -5.16071 | opp_overlap 4359076 4359078, overlap 4359078 4359079 GCTCTGTTATTAATA G-CTGCTTGCGCAATG GGGA CGT-GCGCTAGCAGAC TTTTTATTGATCCTT Pnap_4079 4359935 - 4359135 - | amidohydrolase 2 TERM 5277 4360243 - 4360259 + G 73 -3.5 -4.81249 | overlap 4360228 4360240 GCGCCGGGCTGGGCG GCGCTTC GAT GCTGCGC TTTTTCCGTTTCCGC Pnap_4080 4359966 - 4360733 + | UbiC transcription regulator-associated domain-containing protein TERM 5278 4361241 - 4361276 + G 70 -9.8 -3.62096 | gap 2, overlap 4361246 AAATGTCGGCGAGCT GATAGCGGCTGCCCGG GCCAGG CCGGGC-GCCG-TGTC TTTCGCCTCATCGGG TERM 5279 4361246 - 4361272 + G 74 -13 -3.26298 | gap 1, overlap 4361241 TCGGCGAGCTGATAG CGGCTGCCCGG GCCAGG CCGGGC-GCCG TGTCTTTCGCCTCAT TERM 5280 4361650 - 4361638 - g 85 -6.2 -5.00616 | GCGGCGCTGAAAAAA GCGC TGGAC GCGC CCGACGTCAAGGCCC Pnap_4081 4360780 - 4361787 + | hypothetical protein TERM 5281 4362765 - 4362742 - g 76 -11 -3.73072 | gap 1 AACTGGCCCAGGAAA CCGCGCTGGCC GTG GGC-AGCACGG GCGCGGAGTTCGACG Pnap_4082 4361859 - 4362854 + | hypothetical protein TERM 5282 4362905 - 4362941 + T 100 -18.1 -4.29396 | opp_overlap 4362907, overlap 4362892 4362906 TTGCTATATTTTCAA TAGCTGTTTGCGCATGC CCT GCATGCGCAAACAGCAC TTTTCATCAATAATT TERM 5283 4362906 - 4362940 + T 100 -21.6 -3.16914 | opp_overlap 4362907, overlap 4362892 4362905 TGCTATATTTTCAAT AGCTGTTTGCGCATGC CCT GCATGCGCAAACAGCA CTTTTCATCAATAAT TERM 5284 4362939 - 4362907 - T 100 -25.1 -3.05343 | opp_overlap 4362892 4362906 4362905 GCTATATTTTCAATA GCTGTTTGCGCATGC CCT GCATGCGCAAACAGC ACTTTTCATCAATAA Pnap_4083 4364451 - 4362976 - | peptidase M20 TERM 5285 4363087 - 4363048 - G 80 -6.2 -4.70659 | gap 1, opp_overlap 4363068, overlap 4363050 CGGCACATGCAAAAA CTCGTTCGGCCCG-TGCGC ATT GCTCTGCGGGCCGAGCACG CCGCAGACCATCATC Pnap_4084 4365282 - 4364542 - | two component LuxR family transcriptional regulator TERM 5286 4365314 - 4365329 + r 95 -6.8 -5.30686 | gap 1, opp_overlap 4365314, overlap 4365317 GTGGCCATCAGTCAA GCGGCCG GGC CGG-CGC TTTTTTCTGGCTGTT TERM 5287 4365529 - 4365550 + r 75 -5.7 -4.56597 | opp_overlap 4365520 AAAACGCCGGTCGCG CGCATGGCG TTCA CGCCGGGTG TTTTTCAGGCAGGCG Pnap_4085 4367497 - 4365539 - | integral membrane sensor signal transduction histidine kinase TERM 5288 4366782 - 4366760 - G 77 -2.6 -5.07567 | overlap 4366763 4366776 CGACATGGCAAAAAA CAGCAGATAC AGC GAATCCGGTG CCCGCGAAGCCGCTT TERM 5289 4366996 - 4367011 + g 71 -8.2 -3.86524 | GGAGGCTGTCCGGCA GCTCGG CGCT CCGGGC TTTGTCCAGCGGTAT TERM 5290 4367081 - 4367118 + g 76 -9.1 -4.07568 | gap 1, opp_overlap 4367083 4367101 GCTGGAGCGGTACAC CAGCCGTCC-GCTGGC ATACACC GCCAGCTGGCCGTCTG TTTTCCAGCGCGGAA TERM 5291 4367867 - 4367852 - g 70 -11.8 -3.14051 | overlap 4367850 GCACCGGCATCAACA CCGGGG TCAG CCCCGG CACCGGCAGCGTGCC TERM 5292 4369581 - 4369607 + G 75 -3 -4.86621 | gap 2 TGGCACCTCGTTCAA GCTG-GGC-CTG CAGAC CAGCGCCACGGC TTTTTCATTGCCGCT Pnap_4086 4367746 - 4370757 + | pentapeptide repeat-containing protein TERM 5293 4371917 - 4371878 - g 70 -10 -3.64703 | gap 1, opp_overlap 4371888 TGCCGGCGACGCAAA GCACC-CTGCTGGCGCG TTCGCTT CAGGCCAGCAGCGGCGC GTCCTGGACCGCACG TERM 5294 4373778 - 4373796 + G 100 -13.1 -5.00616 | TCAGGCCTTCGACAC CGGCGCC AACCC GGCGCCG TTTTTTGCCGGCCAG Pnap_4087 4370812 - 4374099 + | hypothetical protein Pnap_4088 4375008 - 4374139 - | phosphatidylserine decarboxylase TERM 5295 4374509 - 4374481 - G 74 -12.3 -3.53012 | CTCGTTGCGCGCAAA CAGCCCCGGCACG CCG CGCGCCGTGACCG GATTGACCGAGAACA Pnap_4089 4375263 - 4375075 - | heavy metal transport/detoxification protein TERM 5296 4375714 - 4375699 - g 81 -6.8 -4.74103 | gap 1, overlap 4375701 GCGGCAATTGAAAAA GC-CGGC TAT GCCGTGC CCGAGCAGTCGCTGC TERM 5297 4376180 - 4376212 + G 71 -9.7 -3.69323 | opp_overlap 4376140 TGGATTTGCTGGTGG CGGTCGGCACGTCGG CAG CCTACGGGCTGAGCG TTTACATGCTGCTGC TERM 5298 4376697 - 4376683 - g 78 -3.4 -5.0538 | overlap 4376684 4376685 GCGCAGGCGAAAAAA GCGCCG ATT CAGCGG CTGGTCGATCAGGTC TERM 5299 4377529 - 4377513 - g 81 -10.1 -4.17048 | TCTGCCCGAAAACAA GGCCGAC ATC ATCGGCC AGCTCAAGGATCAGG TERM 5300 4377607 - 4377552 - g 84 -16.9 -2.74012 | overlap 4377591 GGATCAGGTGAACGA CCAGGGCGGGCGCGT-GGCGATGGTCG GCGA CGG-CATCAACGACGCGCCCGCGCTGG CGGCGGCCGATGTCG TERM 5301 4377735 - 4377765 + G 83 -6.7 -4.83615 | CTCGCGCCGCACCTA CGCCAAGATCCGG CAAAA CCTGTTCTGGGCG TTTTTCTACAACGTG Pnap_4090 4375468 - 4377909 + | heavy metal translocating P-type ATPase Pnap_4091 4377906 - 4378322 + | MerR family transcriptional regulator TERM 5302 4378351 - 4378383 + T 83 -9.7 -4.22214 | opp_overlap 4378349 4378351, overlap 4378336 GCTATGAATTGAATA GCTGCTTGCGCAGGT GTA GCCTGCGCTGGAGGC TTGTTTTACCTGAAT TERM 5303 4378442 - 4378464 + T 74 -7 -4.25104 | overlap 4378443 CGCTGGCATTCGGGC GCAAGGTCTT TTT AAGGCCTTGA TTTTCATAAAAACAG TERM 5304 4378488 - 4378477 - T 72 -2.2 -4.84359 | gap 1, opp_overlap 4378478 TGATTTTCATAAAAA CAGCC TCT GGC-G CTTTATCTGCCTGCG Pnap_4092 4378800 - 4378552 - | hypothetical protein TERM 5305 4378850 - 4378817 - R 91 -11 -4.36914 | opp_overlap 4378823, overlap 4378823 GTGCGCTCCACAAAA CAAAAAGCCCCGGC AAAGTG GCCAGGGCTCTTGG GGCGTGCAGTCAATG TERM 5306 4378844 - 4378823 - R 100 -10.8 -5.54907 | opp_overlap 4378823, overlap 4378817 TCCACAAAACAAAAA GCCCCGGC AAAGTG GCCAGGGC TCTTGGGGCGTGCAG TERM 5307 4378931 - 4378903 - R 81 -11.7 -3.56594 | GGAAATGGTGTGAAA CACAGTCCAGCCG GGG CGGATGAACTGCG CTCAGAGGGGGAAGG TERM 5308 4379151 - 4379133 - R 89 -8.8 -4.65916 | overlap 4379148 TTCATCGCAACAAAA CAGCCGGT TTA ACCAGCCG TGGGCAAGGCGCCCG Pnap_4093 4379512 - 4379141 - | hypothetical protein TERM 5309 4379465 - 4379494 + g 73 -3.5 -4.73682 | gap 1 CTCGACGGCATCATT GGCCTTGGTGGC CACTTGC GCC-CCGAAGCC TTTTATCTTGTCGAG TERM 5310 4379815 - 4379836 + r 93 -15.9 -3.15544 | CAAATCTTGACATCC TCCCCTCCC TAAA GGGAGGGGA TTCCTACAGCTAGAC Pnap_4095 4380980 - 4379823 - | IS605 family transposase OrfB TERM 5311 4381008 - 4380976 - G 81 -4 -5.07107 | overlap 4380977 4380978 4380980 GAAACCTTGAAAAAA CCCATCGGCAGGCC ACCAA AGCCTGCCAGCGAA AAACTGGAGCAGCGA Pnap_4096 4382120 - 4381236 - | transposase, IS4 family protein TERM 5312 4382753 - 4382771 + G 74 -5.9 -4.49756 | overlap 4382754 CCCATCGTCTCGGTC TCGCTGG GCCTG CCGGCGG TTTTCCTGTTTGGCG Pnap_4097 4382303 - 4382956 + | 2OG-Fe(II) oxygenase Pnap_4098 4383822 - 4382968 - | hydroxypyruvate isomerase TERM 5313 4383028 - 4383052 + g 71 -10.7 -3.40403 | gap 1 CCCGTCCGAAGTCGC GCCGG-GCGC CAGGCC GCGCACCGGC TTGTACTCGCACCCC Pnap_4099 4385691 - 4383829 - | sulphate transporter Pnap_4100 4387106 - 4385742 - | chromate transporter TERM 5314 4386391 - 4386372 - G 91 -9.2 -4.62069 | overlap 4386374 GCCGTAGGTGAAAAA CAGCGCCG CCAT CGGCGCCA GCCAGAGCACGGCGC TERM 5315 4386389 - 4386374 - G 81 -11.8 -3.92746 | overlap 4386372 CGTAGGTGAAAAACA GCGCCG CCAT CGGCGC CAGCCAGAGCACGGC TERM 5316 4386783 - 4386755 - G 81 -3.7 -5.02074 | overlap 4386756 4386757 TGATGCCGTAAAAAA TCCCGGCCACCAG CGG CTGCTGGCCAAAG GCCATGTAAATCCAG TERM 5317 4386847 - 4386837 - G 78 -4.6 -4.7373 | CGACGGCAGGAAAAA CAGG CTG CCCG CCACCACGCCGCCCC Pnap_4101 4387716 - 4387108 - | methionine biosynthesis protein MetW metX 4388822 - 4387713 - | homoserine O-acetyltransferase TERM 5318 4388597 - 4388580 - G 91 -6.9 -5.31275 | GCCGATGACAAAAAA CCGGTTG GTAT CGACCGG CTTGCCCGGGCCGAT TERM 5319 4388932 - 4388906 - R 100 -12.2 -5.3104 | opp_overlap 4388906 GGAGCAAAAAGAAAA CCCGGCATCGCT GAA AGCGAGTCCGGG TTCGTGCAGAGTCGT TERM 5320 4388906 - 4388932 + r 76 -12.2 -3.1505 | opp_overlap 4388906 GGAGCAAAAAGAAAA CCCGGCATCGCT GAA AGCGAGTCCGGG TTCGTGCAGAGTCGT Pnap_4103 4389577 - 4389011 - | hypothetical protein TERM 5321 4389263 - 4389248 - G 86 -4.7 -5.24129 | TTCGGCCAGAAAAAA CACCA GTACCG TGGTG CCGAACACGCCGAAG TERM 5322 4389597 - 4389586 - H 91 -3.6 -5.52384 | CTTCCATGAAAAAAA CAGC TCAA GCCG GATCAAAAAAACCAA TERM 5323 4390151 - 4390171 + G 93 -2.6 -5.60993 | gap 2 TTTTGCCGTCGGTTA TGGCGTGGCC TAT GGC-AC-CCA TTTTTTTGTCGGCGC Pnap_4104 4389963 - 4391165 + | Rh family protein/ammonium transporter Pnap_4105 4391376 - 4391834 + | RNP-1 like RNA-binding protein TERM 5324 4391905 - 4391944 + T 95 -10.2 -4.56597 | opp_overlap 4391912, overlap 4391907 4391912 4391941 TTGATTGAAGAGTGC TTAAAAAGGCTTCAAAAC TTCG GTTTTGAAGCCTTTTGCG TTTTTGAGCACAGAA TERM 5325 4391907 - 4391942 + T 83 -15 -2.60032 | opp_overlap 4391912, overlap 4391905 4391912 4391941 GATTGAAGAGTGCTT AAAAAGGCTTCAAAAC TTCG GTTTTGAAGCCTTTTG CGTTTTTGAGCACAG TERM 5326 4391912 - 4391937 + T 100 -14.9 -4.4874 | opp_overlap 4391912, overlap 4391907 4391905 AAGAGTGCTTAAAAA GGCTTCAAAAC TTCG GTTTTGAAGCC TTTTGCGTTTTTGAG TERM 5327 4391937 - 4391912 - T 100 -14.9 -4.59511 | opp_overlap 4391907 4391905 4391912 AAGAGTGCTTAAAAA GGCTTCAAAAC TTCG GTTTTGAAGCC TTTTGCGTTTTTGAG Pnap_4106 4392706 - 4391993 - | hypothetical protein TERM 5328 4392202 - 4392185 - G 72 -4 -4.65895 | overlap 4392197 CTCCTCATTCAAAAA GGCGTG AAGAAA CTCGCC CTGAAACTCAAGCCG Pnap_4107 4393320 - 4392703 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Pnap_4108 4394314 - 4393322 - | KpsF/GutQ family protein TERM 5329 4394117 - 4394133 + g 76 -5.7 -4.62069 | CGTGGCGGCAATCTT GCGGCCG ATA TGCCCGC TTTTTCCCATGCCCA TERM 5330 4394699 - 4394714 + G 77 -4 -4.84359 | gap 1 CTCACCATGGTGCTG GTG-ACC CTG GGTTCAC TTTTTCTGGCCGTCG TERM 5331 4395398 - 4395430 + G 79 -11.1 -3.90286 | overlap 4395392 GCCGGTGTATCCCTG CGCACCGGCCTGTAC CTG GCGCAGGCCGGCGAG TTTGGCTTTGTGCTG Pnap_4109 4394405 - 4396390 + | sodium/hydrogen exchanger Pnap_4110 4397137 - 4396457 - | hypothetical protein Pnap_4111 4397797 - 4397306 - | cyclic nucleotide-binding protein Pnap_4112 4399387 - 4397951 - | tRNA modification GTPase TrmE TERM 5332 4398307 - 4398329 + g 83 -4.8 -5.08011 | overlap 4398309 CCATGTCGGATTTAT TCCAGACATC GAT GATGGCTGTA TTTTTTGGAAGTTTT TERM 5333 4398309 - 4398327 + g 72 -7.4 -4.15235 | overlap 4398307 ATGTCGGATTTATTC CAGACATC GAT GATGGCTG TATTTTTTGGAAGTT TERM 5334 4399419 - 4399435 + r 100 -15.1 -5.24796 | opp_overlap 4399419 ATCGGCAATGGTAAA GGGCCGC TTC GCGGCCC TTTTTGTTATCTGAA TERM 5335 4399435 - 4399419 - R 95 -15.1 -3.66356 | opp_overlap 4399419 ATCGGCAATGGTAAA GGGCCGC TTC GCGGCCC TTTTTGTTATCTGAA Pnap_4113 4401151 - 4399442 - | 60 kDa inner membrane insertion protein TERM 5336 4399595 - 4399571 - G 86 -12.9 -4.09963 | CGGGAAGAAGAAGAA CATGACGCTGA AAA TCAGCGGCATG AACCACATCAGCTTG TERM 5337 4401140 - 4401160 + g 76 -6.1 -4.57073 | overlap 4401135 CAAGATGGTGCGGCG GATGTCGTT CAT GACGGCGTC TTTTTAGAAGGAATG Pnap_4114 4401465 - 4401148 - | hypothetical protein TERM 5338 4401375 - 4401347 - G 89 -14.7 -3.92963 | GAATAAGCAGAACAA CTGGGCTCAAACC GGC AGTTTGAACCCAG CGCGGGACTGATCAG Pnap_4115 4401794 - 4401462 - | hypothetical protein TERM 5339 4401744 - 4401726 - G 71 -8.8 -3.9392 | opp_overlap 4401726, overlap 4401729 4401739 GTGCAGGTGAAACAA CATGGCTG AAT CAGCCGTG TTTCCGGCTCGAACG TERM 5340 4401726 - 4401744 + g 73 -11 -3.57144 | opp_overlap 4401726 4401729 4401739 GTGCAGGTGAAACAA CATGGCTG AAT CAGCCGTG TTTCCGGCTCGAACG Pnap_4116 4402064 - 4401930 - | ribosomal protein L34 TERM 5341 4402254 - 4402241 - H 77 -8.1 -4.15061 | GAATCCACACACAAA GCTGC GCAG GCAGC CTCAAGCCGCTACGA TERM 5342 4402805 - 4402819 + H 70 -9.2 -3.6715 | opp_overlap 4402805 4402798 TAACAATATCCACAA GCGGCC AGC GGCTGC TTTGCACTTGCATCC TERM 5343 4403639 - 4403627 - g 100 -6.3 -5.60993 | TTGCTGACAAAAAAA TCACA CAT TGTGA TGACCAGTGATACCT TERM 5344 4404062 - 4404037 - g 86 -6.7 -5.09895 | CATGTACTCAAAAAA GCGGCCCGCCA ACAT TGCCCGACCGC GCCAGATTGCCATGT TERM 5345 4404190 - 4404174 - g 72 -2.1 -4.7254 | opp_overlap 4404174, overlap 4404176 ATGCCGTACGAAAAA TGGCGGC CGA GCGGCAA TTGATGACTGAACTC Pnap_4117 4402850 - 4404247 + | chromosomal replication initiator protein DnaA TERM 5346 4405379 - 4405358 - g 72 -7.3 -4.21194 | CCTGACCAGCGAAAA GTTCAAGGG CGTG CGCTTGAAC ATCGAACCCGGCACC Pnap_4118 4404522 - 4405628 + | DNA polymerase III, beta subunit TERM 5347 4405692 - 4405662 - f 76 -10.5 -3.75332 | gap 1, opp_overlap 4405668, overlap 4405664 ACGCCTGAAGCGAAA GA-CAGACCCGCGA AGCT TCGCGGGTTTGGTC ATTCAAGAGATTGAA TERM 5348 4405689 - 4405664 - f 88 -13.3 -3.46068 | opp_overlap 4405668, overlap 4405662 GCCTGAAGCGAAAGA CAGACCCGCGA AGCT TCGCGGGTTTG GTCATTCAAGAGATT TERM 5349 4405668 - 4405685 + F 90 -12.7 -3.84246 | opp_overlap 4405664 4405662 GAAGCGAAAGACAGA CCCGCGA AGCT TCGCGGG TTTGGTCATTCAAGA TERM 5350 4405763 - 4405746 - g 75 -3.3 -4.88795 | ACTGAAGAAAACAAA CTGAACG AAGC CGACCAG GTACATGTGTCCGAC TERM 5351 4407990 - 4408012 + G 81 -13.4 -3.5393 | GGTGCCGACTATGCC GTCCTGGCCG AAG CGGCCAGCAC TTTCCACGGCCTGAT Pnap_4119 4405728 - 4408352 + | DNA gyrase, B subunit Pnap_4120 4408360 - 4408971 + | DNA-directed DNA polymerase Pnap_4121 4409056 - 4410153 + | phospho-2-dehydro-3-deoxyheptonate aldolase