TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.681721 %AT, 1417112 nt, 8092 terms. Intergenic: 0.752537 %AT, H2T: 150059 nt, 1225 terms; T2T: 51884 nt, 852 terms; H2H: 76312 nt, 1189 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|33860560|ref|NC_005072.1| Prochlorococcus marinus subsp. pastoris str. CCMP1986, complete genome (length 1657990) dnaN 174 - 1331 + | DNA polymerase III subunit beta PMM0002 1333 - 2040 + | hypothetical protein purL 2044 - 4383 + | phosphoribosylformylglycinamidine synthase II purF 4430 - 5890 + | amidophosphoribosyltransferase PMM0005 8328 - 5887 - | DNA gyrase/topoisomerase IV, subunit A TERM 1 6765 - 6776 + g 77 -3 -5.56573 | TAAAATAAAATCTAT TATC TACT GATA TTTTTGTTTCTTTAT TERM 2 6856 - 6866 + g 81 -4 -5.63236 | TTGATTTATATCTTT CAAA ATT TTTG TTTTTCTTTTTACAT PMM0006 9270 - 8416 - | hypothetical protein TERM 3 9111 - 9126 + g 80 -7.6 -4.20696 | opp_overlap 9109 9107 9111 TTTGTCCAAAATACA GAAGCT GATA AGCTTC TTTTCCAATTGATAA TERM 4 9126 - 9111 - G 71 -7.6 -3.39908 | opp_overlap 9111, overlap 9109 9107 TTTGTCCAAAATACA GAAGCT GATA AGCTTC TTTTCCAATTGATAA PMM0007 10219 - 9275 - | hypothetical protein PMM0008 10367 - 11104 + | hypothetical protein nusB 11105 - 11734 + | transcription antitermination protein NusB TERM 5 12488 - 12461 - g 74 -2 -5.61689 | overlap 12462 AAAACCAATAAAAAA TTCTGGAACAAA TATT CTTGTTCCACAG AAAGGGAAGTTGAAT ftsY 11793 - 13115 + | signal recognition particle docking protein FtsY PMM0011 13183 - 14526 + | protein phosphatase 2C domain-containing protein argH 14585 - 15964 + | argininosuccinate lyase TERM 6 16029 - 16043 + G 77 -4.3 -5.1485 | opp_overlap 16029 AGTAATGTATATGAA CTACT TAATT AGTAG TTTTTATCTTGGTTA TERM 7 16567 - 16553 - g 72 -8.6 -3.10611 | overlap 16552 CTTACGTTAATAAAT CTTCTG GAG CAGAAG GTTGGGAAGATAGAA PMM0013 16018 - 16683 + | RNA recognition motif-containing protein PMM0014 17684 - 16680 - | tRNA-dihydrouridine synthase A PMM0015 17712 - 18206 + | hypothetical protein TERM 8 18749 - 18739 - g 74 -6.8 -4.20868 | GTGTTAAAACAACAA GGAG TTT CTCC AATGAGGGTAGTTGC grpE 18283 - 19002 + | heat shock protein GrpE TERM 9 19995 - 19973 - g 88 -9.2 -4.30719 | TCTCTTGAGAATAAA GGAGTTCCTA GAT TAGGAAATCC AGTTGCAAGAGGCAA dnaJ 19034 - 20158 + | DnaJ protein PMM0018 20155 - 20388 + | hypothetical protein PMM0019 20378 - 21295 + | hypothetical protein PMM0020 21611 - 21261 - | hypothetical protein murB 22524 - 21634 - | UDP-N-acetylenolpyruvoylglucosamine reductase murC 23953 - 22532 - | UDP-N-acetylmuramate-alanine ligase TERM 10 22603 - 22613 + g 90 -4 -5.96521 | overlap 22599 CAGCCCCCATATTTA TGAT AAA ATCA TTTTTTTTGGTTAAT TERM 11 22723 - 22733 + g 75 -2.6 -5.61596 | opp_overlap 22723 TTAGTTGCGAGTCAA TATT GTC AATA TTTTTTTCTCCAGCT TERM 12 24520 - 24510 - g 70 -4 -5.02074 | GTAGGTGCTAAAAAA GTAA TTC TTAC TGCTCCTGGTAAAGG gap2 24150 - 25172 + | glyceraldehyde 3-phosphate dehydrogenase(NADP+)(phosphorylating) thiL 26159 - 25173 - | putative thiamine-monophosphate kinase TERM 13 25437 - 25421 - G 73 -8.1 -3.44146 | opp_overlap 25420 25421 25424, overlap 25424 CTTTTGCATAATCAA TAATTGC TTT GCAATTA CTTTCAGTTGCTAAA PMM0025 27243 - 26152 - | cyclophilin-type peptidyl-prolyl cis-trans isomerase TERM 14 26357 - 26335 - G 76 -3.5 -5.51353 | gap 1, overlap 26355 TAAAAAGAAGAAAAA CTGC-GATGA TCCA TCATCAACAG CGGCACTGGAATGTG efp 27287 - 27847 + | elongation factor P TERM 15 27879 - 27908 + G 70 -8.1 -3.06009 | gap 1 TCATGATGACCTAGA TCGCTTGATAGAAA AAA TTTCTA-CAAGTGA TATTCAAGAATTTTC accB,fabE 27847 - 28353 + | biotin / lipoyl attachment:Acetyl-CoA biotin carboxyl carrier subunit pdxA 29370 - 28330 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 16 28905 - 28885 - G 87 -10.5 -3.59247 | opp_overlap 28885, overlap 28876 CAATAAGGTGTTAAA TCTCCAACC AGT GATTGGAGA TTTAGCTGTAAATAA TERM 17 28885 - 28905 + g 75 -8.3 -3.71873 | opp_overlap 28876 28885 CAATAAGGTGTTAAA TCTCCAACC AGT GATTGGAGA TTTAGCTGTAAATAA PMM0029 30250 - 29363 - | hypothetical protein TERM 18 30452 - 30478 + Gr 78 -6.7 -4.37092 | opp_overlap 30451 GTGCATTTTTAATAT TTCCTGAATCT CCACA AGATTCAGAAA TTTTATGCAAAAAAT PMM0030 30235 - 30525 + | transcription factor TFIID (or TATA-b PMM0031 30930 - 30526 - | HNH endonuclease:HNH nuclease PMM0032 31520 - 31101 - | type II secretion system pr PMM0033 32091 - 31579 - | hypothetical protein TERM 19 32013 - 32024 + g 78 -5.8 -4.83615 | CTGCAAGTGGAGCTG CAGG TATG CCTG TTTTTATAGCAAGTG PMM0034 32335 - 32532 + | hypothetical protein TERM 20 32516 - 32538 + T 70 -3.4 -5.28176 | overlap 32518 TAGGCGGAAATGTTG AAGAACCTGG TAC TTAGGTTCTC TTTTTTATAAATGGC TERM 21 32518 - 32536 + T 70 -6 -4.2748 | overlap 32516 GGCGGAAATGTTGAA GAACCTGG TAC TTAGGTTC TCTTTTTTATAAATG DHSS 33697 - 32543 - | soluble hydrogenase small subunit cbiD 33758 - 34876 + | cobalt-precorrin-6A synthase TERM 22 34962 - 34949 - g 83 -4.5 -5.5943 | AAATTACTAAAAAAA GAGAG AGAT CCCTC AATATTAATTCTAGA guaA 34925 - 36511 + | bifunctional GMP synthase/glutamine amidotransferase protein PMM0038 36556 - 37269 + | hypothetical protein PMM0039 37360 - 37968 + | hypothetical protein TERM 23 37976 - 37994 + F 70 -6.2 -4.29953 | overlap 37973 CAATATAAACCGTTT TATTAAAT AAA ATTTAATA TTATTTTGATGATTT TERM 24 38170 - 38149 - f 77 -7.5 -4.04209 | CGAAATGATTATAAA TTTTTAGTT CAAA AACTAAAAA ATATAAAGGAGATTA TERM 25 38324 - 38336 + G 72 -3.5 -5.14645 | opp_overlap 38324 ACTTTTTTATTAATA TTAAT TAG ATTAA TTTTTCTTCAATTAT PMM0040 38231 - 40021 + | putative penicillin-binding protein PMM0041 40576 - 40052 - | putative reductase TERM 26 40391 - 40406 + g 72 -2.6 -5.49579 | TTCTTTTATTTCAAT TATTTC GACA GGAATA TTTTCTTTTTTGTGA PMM0042 42397 - 40595 - | flavoprotein TERM 27 40818 - 40830 + g 76 -6.3 -4.62471 | opp_overlap 40818 40829, overlap 40829 TCCCCTGGTGAGAAA GGTTT TGT AAACC TTTTTAAAGGTTCCC TERM 28 41628 - 41618 - G 71 -5.4 -4.67353 | opp_overlap 41618 GTAGTCATTTAAAAA GCTT TTT AAGC TGTACTCAATTGCTG PMM0043 44190 - 42415 - | flavoprotein TERM 29 44455 - 44470 + G 74 -3.2 -5.47399 | ACTATCGCTGGAATG CTGCCT TTTA AGCCAG TTTTTTTAGGATTGA TERM 30 44828 - 44810 - g 71 -5.3 -4.72272 | gap 1, opp_overlap 44811, overlap 44812 GGTCTTCAGGAAAAA CA-GGTCC TTGC GGACCATG TTCAGAATTATATTT TERM 31 44825 - 44812 - g 79 -8.1 -3.98256 | opp_overlap 44811, overlap 44810 TCTTCAGGAAAAACA GGTCC TTGC GGACC ATGTTCAGAATTATA alaS 44305 - 46965 + | alanyl-tRNA synthetase PMM0045 48896 - 46950 - | arginine decarboxylase PMM0046 49017 - 49475 + | nucleoside diphosphate kinase thiO 50591 - 49482 - | putative thiamine biosynthesis oxidoreductase TERM 32 50266 - 50279 + g 81 -3.9 -5.61824 | CCATATTTATAAGTT TTGAA TTTC TTCAA TTTTTTTAAATTTTC gatB 50672 - 52144 + | aspartyl/glutamyl-tRNA amidotransferase subunit B coaE 52762 - 52148 - | putative dephospho-CoA kinase TERM 33 52882 - 52901 + G 74 -7.2 -4.08767 | GTGAGTGATGGTGAA GAAAAGCC TGAT GGTTTTTC TTTTGCAGGGATCGC TERM 34 53599 - 53579 - g 86 -4.1 -5.86965 | ATTCAGGAAAAAAAA TTGATAAGA AAT TTTTATCAA AGATTCAATCAGGAA TERM 35 53965 - 53981 + G 71 -8.1 -3.27602 | overlap 53962 AAATATTTAGTTGAG GATATAG TAT CTATATC TCTTCATCTTAATTC argJ 52867 - 54075 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein PMM0051 54915 - 54244 - | hypothetical protein TERM 36 55787 - 55777 - g 77 -4 -5.47914 | AAAAACTATAAAAAA TCAA GTA TTGA ATTAAGGAGATGTCT PMM0052 55066 - 56028 + | aldo/keto reductase TERM 37 56341 - 56358 + F 72 -8.4 -3.17456 | opp_overlap 56339, overlap 56349 TCAATATAAAATGGT GGAGCC CTTCCA GGCTCC TTGGATCATTTGGTT PMM0053 56663 - 57787 + | putative RNA methylase PMM0054 58175 - 57789 - | hypothetical protein PMM0055 58637 - 58176 - | hypothetical protein TERM 38 58976 - 59007 + H 73 -9 -2.89971 | opp_overlap 58982, overlap 58973 58982 TAGGTTTTTCCTTTT TTAAAATGCACTAA CTTG TTAGTTCATTTTAA TGATTGATTATTGAA PMM0056 59051 - 59413 + | hypothetical protein TERM 39 61830 - 61802 - g 74 -7.6 -3.85522 | opp_overlap 61801 61799 AATTGATGATAACAA TTTGAGGCTTAA TCAGC TTAAGTCTCAAA ATAATTTATTAAATG TERM 40 62010 - 61992 - g 88 -6.1 -5.38951 | AAGTTAGATAAAAAA CTTGAAT TAATG ATTCAAG AGAAAGATGAATTAT PMM0057 59496 - 63080 + | SMC ATPase superfamily chromosome segregation protein TERM 41 63638 - 63621 - g 71 -8.5 -2.97747 | CCTGTAGATGAGATA GTCAGTA GTGG TACTGAC AGAATAATTGTTTAT PMM0058 63132 - 64148 + | hypothetical protein PMM0059 65449 - 64160 - | hypothetical protein TERM 42 66924 - 66907 - g 70 -6.3 -4.17048 | gap 1, opp_overlap 66915 CTCCCGGTAAAATAA CTGGATGG CTG CC-TCCAG GGGGCCCTGGAGTGA accC 65841 - 67190 + | acetyl-CoA carboxylase biotin carboxylase subunit PMM0061 67513 - 67208 - | hypothetical protein psbX 67652 - 67792 + | photosystem II PsbX protein TERM 43 68657 - 68635 - g 89 -7.8 -5.09762 | ACTTCAACAGAAAAA GTAGAAGATG CAT CATTTTCTAC AAATATCAATGAAGT TERM 44 68690 - 68679 - g 71 -2.2 -5.32565 | CAATGAAGTAAAAAA GCCT CGTC AAGC AAGAAGCTCAGCAGC PMM0063 67870 - 68802 + | hypothetical protein hli2 69036 - 68803 - | high light inducible protein PMM0065 71028 - 69046 - | ABC transporter, ATP binding protein PMM0066 71353 - 71066 - | hypothetical protein PMM0067 71742 - 71401 - | HIT (histidine triad) family protein def 72368 - 71763 - | peptide deformylase TERM 45 73782 - 73755 - g 71 -7.8 -3.53444 | TGACGGGTCTTTAAA TTCCGAAGTGCA GCAT TGGACTTCGAAA GGATTTACAGTTGCG PMM0069 72448 - 74376 + | esterase/lipase/thioesterase family protein PMM0070 75650 - 74373 - | putative cysteine desulfurase or selenocysteine lyase TERM 46 74792 - 74779 - G 70 -8.1 -3.13522 | overlap 74777 ATTGCTTCAGCAATA GCTGG AGTA CCAGC TTCAAATTTATGAGG TERM 47 75306 - 75318 + g 77 -7.7 -3.98484 | AAATTCTCCCCATGA TCTGG CAA CCAGA TTTATAGCTTCAGTT PMM0071 76867 - 75650 - | ABC transporter, membrane component PMM0072 77657 - 76872 - | ABC transporter, ATP binding component TERM 48 77232 - 77246 + g 82 -5 -5.50723 | overlap 77233 AAAGGCAGAATCCAT TTTGAC TAA GTCAAG TTTTTCTTTTACTAA PMM0073 79121 - 77679 - | cysteine desulfurase activator complex subunit SufB TERM 49 78838 - 78848 + g 74 -4 -5.30616 | opp_overlap 78838 ACTTCATCTAAGCTA GAAA TCT TTTC TTTTTGTTTAGGTGC PMM0074 79219 - 79581 + | hypothetical protein PMM0075 79845 - 80951 + | hypothetical protein pgm 81171 - 82808 + | phosphoglucomutase TERM 50 83325 - 83309 - g 78 -6.6 -4.41348 | opp_overlap 83309 TTTGCCGTAAATAAA GCTCTA ATAAG TAGAGC TCGTATTTTCTCATT yrvN 82844 - 84133 + | recombination factor protein RarA PMM0078 84786 - 84130 - | putative 4'-phosphopantetheinyl transferase family protein TERM 51 84553 - 84571 + gF 84 -9.6 -3.69621 | opp_overlap 84557, overlap 84542 CATCCCTTTTGGTAA TTCAGGAG GTT CTCCTGGA TTTGCAATTATGGGT bcp 84786 - 85253 + | putative bacterioferritin comigratory (BCP) protein PMM0080 85939 - 85259 - | hypothetical protein cysH 86680 - 85958 - | phosphoadenosine phosphosulfate reductase PMM0082 86776 - 87960 + | putative NADH dehydrogenase, transport associated TERM 52 88059 - 88074 + G 75 -4.8 -5.06016 | AATAATTTAGATGCA CTAATA ACAG TATTAG TTTTATTTCTGTCAT TERM 53 89253 - 89278 + G 100 -13.5 -3.02147 | opp_overlap 89253, overlap 89248 89257 TTTTTAATTAGAAAA CCAATTGCAAT TGCA ATTGCAATTGG TATGGTTCTCTTGCC TERM 54 89278 - 89253 - g 100 -13.5 -4.5442 | opp_overlap 89253 89248 89257 TTTTTAATTAGAAAA CCAATTGCAAT TGCA ATTGCAATTGG TATGGTTCTCTTGCC TERM 55 89500 - 89511 + G 78 -5.8 -4.82998 | TGGATTTTATCCTAA GTGG AATG CCAC TTTATTTTGCTTTAA PMM0083 88020 - 89828 + | DASS family sodium/sulfate transporter TERM 56 90278 - 90292 + G 76 -3.6 -5.32608 | overlap 90271 90280 TATTATTTCTTTTGG TGCAAT AGT ATTGTA TTTTTTCGGTTTTTT TERM 57 90360 - 90379 + G 81 -4.3 -5.40464 | overlap 90361 ATTTTTCATAGCATT TCTGCAT ATAACA ATGCAGG TTTTTCTTTATGGTC TERM 58 91221 - 91210 - g 70 -4.4 -4.8277 | AAAGACAAAAAAGAA TTGG CTAT CCAA AAGCTGATCTTTATG PMM0084 89838 - 91241 + | Trk family sodium transporter PMM0085 91260 - 91964 + | VIC family potassium channel protein PMM0086 92273 - 91965 - | hypothetical protein PMM0087 92390 - 92728 + | hypothetical protein PMM0088 92764 - 92994 + | hypothetical protein TERM 59 94584 - 94574 - g 71 -5.4 -4.56775 | AGTGGTGGCGAAAAA GCTA GAT TAGC ATTGGCTTTGATGAT PMM0089 93215 - 94837 + | ABC transporter, ATP binding component PMM0090 96303 - 95155 - | serine protease PMM0091 96452 - 96715 + | hypothetical protein PMM0092 96820 - 97131 + | hypothetical protein hli1 97200 - 97346 + | high light inducible protein PMM0094 97701 - 97375 - | hypothetical protein PMM0095 98660 - 97734 - | serum resistance locus BrkB-like protein PMM0096 99532 - 98735 - | inositol monophosphate family protein PMM0097 100965 - 99535 - | RND family outer membrane efflux protein TERM 60 99784 - 99803 + g 77 -4.4 -5.243 | opp_overlap 99784 TTCTGTAGAAGAAAT TTCTTTTA GAGA TGAAAGAA TTTTTTCCTCATTTA PMM0098 102370 - 100958 - | putative Fe-S oxidoreductase PMM0099 102557 - 103324 + | hypothetical protein TERM 61 104064 - 104104 + G 73 -8.4 -3.54029 | GTTTTATGGTTCTCC CTGCTTTCTAATCTCTGA AGCCC TTAGAGGTGAGGGAGCAG TTCTCGTTGATAAGA nadB 103324 - 104991 + | L-aspartate oxidase PMM0101 105916 - 104981 - | hypothetical protein TERM 62 105961 - 105983 + H 79 -7.2 -4.59089 | overlap 105969 CTATCCTAATATTAT CTTTTAATGA GAC TTATTAAAAG TTTCTTTGTAAATTA PMM0102 106023 - 107387 + | Fe-S oxidoreductase petL 107486 - 107394 - | cytochrome b6f complex subunit PetL PMM0103 107938 - 107552 - | hypothetical protein TERM 63 107974 - 107958 - R 71 -5.3 -4.65078 | opp_overlap 107950 ACATTTTTAATAAAA TTATATT AAT AATATAA ACAACTATCAGATTA PMM0104 109157 - 108003 - | hypothetical protein TERM 64 109148 - 109158 + g 86 -4 -5.73563 | CAATTTTGTGCTCAA TATG ATT CATA TTTTTTTACTTTAAT ribG 109831 - 109169 - | RibD/RibG domain-containing protein TERM 65 109537 - 109555 + g 81 -4.6 -5.32608 | ATCTTTTAATTGGTT GATTGAAA TAA TTCCAATC TTTTTTAAATTTTTT PMM0106 110754 - 109828 - | 6-pyruvoyl tetrahydropterin synthase aroK 110805 - 111362 + | shikimate kinase PMM0108 111616 - 111359 - | hypothetical protein TERM 66 111865 - 111877 + Gr 75 -4.9 -5.02074 | opp_overlap 111874 CTCAAGCACCAGTGA TTTAC AAA GTAAA TTTTTTCAAAAATAA PMM0109 111615 - 112325 + | POLO box duplicated region PMM0110 113037 - 112312 - | putative glutathione S-transferase TERM 67 112519 - 112547 + g 70 -4 -5.11033 | gap 1, opp_overlap 112521, overlap 112521 112525 CAAATATTTTTTATT AATTAG-GGCTTT AGAT AAAGCCTCTAATA TTTTTTGCAGTTCTA TERM 68 112521 - 112545 + g 74 -6.6 -4.17355 | gap 1, opp_overlap 112521, overlap 112519 112525 AATATTTTTTATTAA TTAG-GGCTTT AGAT AAAGCCTCTAA TATTTTTTGCAGTTC PMM0111 113083 - 113295 + | hypothetical protein rbfA 113301 - 113699 + | ribosome-binding factor A hemD 113674 - 114483 + | putative uroporphyrinogen III synthase PMM0114 114946 - 114476 - | putative integral membrane protein crtQ 116403 - 114949 - | zeta-carotene desaturase TERM 69 115692 - 115704 + g 88 -3.4 -5.9218 | overlap 115673 CCTTATGATTTAAGT GGAT TTTGC ATCC TTTTTTTGTTATGTA PMM0116 116503 - 116895 + | hypothetical protein PMM0117 116904 - 117332 + | hypothetical protein TERM 70 117655 - 117683 + G 81 -4 -5.54264 | overlap 117656 117657 117672 GGAGATATAGTTCCT GTTTTTTTTGCA TGGTT TGCAAAAAAAGA TTTTTTTACATATTT TERM 71 117656 - 117682 + G 74 -7.5 -3.90118 | overlap 117655 117657 117672 GAGATATAGTTCCTG TTTTTTTTGCA TGGTT TGCAAAAAAAG ATTTTTTTACATATT TERM 72 117657 - 117681 + G 71 -8.8 -2.92444 | overlap 117656 117655 117672 AGATATAGTTCCTGT TTTTTTTGCA TGGTT TGCAAAAAAA GATTTTTTTACATAT PMM0118 117334 - 118533 + | hypothetical protein PMM0119 118530 - 118799 + | hypothetical protein PMM0120 119682 - 118750 - | putative cell division inhibitor PMM0121 119826 - 120068 + | hypothetical protein PMM0122 120750 - 120073 - | putative heat shock protein DnaJ cysK2 121735 - 120767 - | O-acetylserine (thiol)-lyase A TERM 73 121995 - 121971 - g 88 -8.7 -4.37502 | opp_overlap 121974, overlap 121986 ATGAGGATATTAAAA GAATCTATGAT GAA ATCAAAGATTC TATGAATAGTGATAA PMM0124 121892 - 122161 + | hypothetical protein PMM0125 122163 - 122846 + | ABC transporter ATP-binding protein TERM 74 122998 - 123012 + F 91 -7.1 -5.46657 | opp_overlap 122998 GTTATCGTGTCATAA GACCC CATAA GGGTC TTTTTTATTGGCATG PMM0126 123319 - 124260 + | hypothetical protein TERM 75 124486 - 124501 + T 82 -5.4 -5.47218 | TAAATAAGAGATATT GAGATC TTCG GGTCTC TTTTTTTACGTAAAA PMM0127 124932 - 124573 - | signal peptide binding domain-containing protein TERM 76 125037 - 125027 - H 70 -2.6 -5.52986 | ATTCTACGAAAAAAA TTTA GTT TAAA AATAAAAGATTTAAA TERM 77 125187 - 125199 + H 70 -3.5 -5.34655 | CAAATCGAAAGAATT TATAA AAT TTATA TTTTCTTTTTAGTTG TERM 78 126048 - 126072 + G 88 -11.5 -3.24188 | GGAGCGGGATATTGC CTTGAGTTACC TGC GGTAGCTCAGG TTGATAATGGTATGC rpaA 125358 - 126113 + | two-component response regulator holB 127102 - 126143 - | DNA polymerase III subunit delta' PMM0130 127739 - 127095 - | thymidylate kinase PMM0131 130037 - 127740 - | putative P-type ATPase transporter for copper PMM0132 130155 - 130676 + | photosystem I assembly protein Ycf3 radA 132041 - 130689 - | DNA repair protein RadA TERM 79 131903 - 131925 + g 84 -3.4 -5.80003 | opp_overlap 131903, overlap 131900 TTTTATTTTTATTAA CACTAGTTAT TTT AGATCTAGTG TTTTTTCTTTCTTCA rpaB 132148 - 132894 + | two-component response regulator plsX 132895 - 134295 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 80 134434 - 134419 - g 77 -7.6 -4.10953 | ACGTACCAAATCAAA TCCTGA CGAA TCAGGA AATTAGTAAGAAGGT TERM 81 135108 - 135095 - g 74 -3.9 -5.21683 | overlap 135070 ATTTAAAAAAACAAA TTTCA ATTC TGAAA AAATTAATTGGCTTT fabH 134349 - 135356 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 82 135631 - 135619 - g 70 -4.1 -5.07652 | overlap 135629 CTCTTTAAAAGAAAA TGGCT TTA AACCA ACCTATATCGCTGGA fabD 135371 - 136267 + | malonyl coenzyme A-acyl carrier protein transacylase plsC 136272 - 136892 + | putative 1-acyl-sn-glycerol-3-phosphate acyltransferase PMM0139 137547 - 136897 - | hypothetical protein ycf34 137805 - 137554 - | putative Ycf34 TERM 83 138913 - 138903 - gH 74 -5.4 -4.81752 | opp_overlap 138912 AAAAATATTTAAAAA TCCA AGA TGGA CCTATTTTAGGAAAG PMM0141 137792 - 139039 + | poly A polymerase family protein PMM0142 139098 - 139517 + | RNA recognition motif-containing protein crtB,pys 140426 - 139518 - | squalene and phytoene synthase TERM 84 140382 - 140396 + g 76 -7.2 -4.2528 | TTGAGTTTCTTTTTG GCATAT TTC ATATGC TTTATTAAGTTGGGA TERM 85 140419 - 140431 + g 91 -3.5 -6.10489 | opp_overlap 140415 140419, overlap 140421 140422 AGTTGGGATAATGAA TTTTT CAA AAAAA TTTTTTTTTGAGGTT pds,crtD 141867 - 140446 - | phytoene desaturase TERM 86 142127 - 142111 - g 100 -8.1 -5.41143 | GACTCCTTAAAAAAA GTAAATC AAA GATTTAC TGAACTTGTTCAAGA PMM0145 141958 - 142305 + | NADH dehydrogenase I subunit M PMM0146 142302 - 142919 + | hypothetical protein rbcR 143869 - 142916 - | putative Rubisco transcriptional regulator TERM 87 143901 - 143918 + H 70 -7.1 -3.75024 | overlap 143904 ATTTAACTTTAATTC TAATACC TAAG GGTATTA TTGTTAATGATGAAA PMM0148 143954 - 144682 + | hypothetical protein TERM 88 144963 - 144973 + G 74 -6.8 -4.30719 | opp_overlap 144963 144964 CTGGTGATTTCACAA TCCC AAT GGGA TTTGTTCTCGACCCA TERM 89 145504 - 145537 + G 80 -8.9 -3.71848 | CCCTATTTCAGCTCT TATTCATGCAGCGAC GATG GTTGCTGCTGGAATA TTCTTAGTAGCAAGG ndhF 144716 - 146728 + | NAD(P)H-quinone oxidoreductase subunit F TERM 90 146784 - 146768 - f 74 -5.2 -5.15634 | opp_overlap 146768 CATGGGATGAAAAAA TCTAGA TAATT TCTAGA ATTTGTTTAAGATCA ndhD 146813 - 148453 + | NAD(P)H-quinone oxidoreductase subunit 4 PMM0151 148684 - 149397 + | hypothetical protein PMM0152 149447 - 150625 + | putative sugar-phosphate nucleotidyl transferase PMM0153 151499 - 150609 - | methylenetetrahydrofolate reductase PMM0154 151577 - 151855 + | LuxR family regulatory protein TERM 91 152039 - 152021 - T 80 -6.2 -5.16681 | CTAAAAATAATAAAA TTTATATT TCA AATATAAA GAGAATATAAAGGAA PMM0155 152556 - 152080 - | hypothetical protein TERM 92 152174 - 152194 + g 78 -9.1 -3.4582 | opp_overlap 152174 152171, overlap 152171 TTTGCTATGAAAGAT GGAAGAATA ACT TGTTCTTCC TCTTTAGTAAGCTCA ppnK 153456 - 152557 - | inorganic polyphosphate/ATP-NAD kinase TERM 93 153484 - 153447 - G 74 -7.3 -4.11281 | gap 1, opp_overlap 153453, overlap 153453 TATTAGAACGATAAA TAATAAGCACCAA-TGAA AGA TTCACTTGATGCTTGTTA CCACTTTAATAAATT TERM 94 153478 - 153453 - G 70 -6.3 -4.18213 | gap 1, opp_overlap 153453, overlap 153447 AACGATAAATAATAA GCACCAA-TGAA AGA TTCACTTGATGC TTGTTACCACTTTAA ndhE 153802 - 153482 - | NADH dehydrogenase subunit K TERM 95 153582 - 153559 - G 75 -9.6 -2.85985 | overlap 153558 153562 ACAATATAGCTAAAC CTACAGCAGC TTCT GCTGCTGCAA CTGTAATAACAAAAA TERM 96 153579 - 153562 - G 86 -11.3 -2.67512 | overlap 153559 153558 ATATAGCTAAACCTA CAGCAGC TTCT GCTGCTG CAACTGTAATAACAA TERM 97 153785 - 153803 + g 74 -6.8 -4.22404 | overlap 153782 AAAAGCTTGAAGTGG GATGGATT CTA AATTCATC TTAATTTTTTTTTAT ndhG 154403 - 153804 - | NADH dehydrogenase subunit J ndhI 155043 - 154417 - | NADH dehydrogenase subunit I TERM 98 155089 - 155112 + r 85 -9.8 -3.28712 | opp_overlap 155089 AGTGTATTTAATAAA TGTTTAAGTA TTTC TACTTAAACA TTATCCACCAAAAAA TERM 99 155112 - 155089 - R 95 -9.8 -4.20783 | opp_overlap 155089 AGTGTATTTAATAAA TGTTTAAGTA TTTC TACTTAAACA TTATCCACCAAAAAA ndhA 156231 - 155113 - | NADH dehydrogenase subunit H TERM 100 155931 - 155904 - G 71 -7 -3.97645 | overlap 155905 ACCAAGATAGAATAA CCGGTACCAATA CTAA TATTGGTCCCGC AGTGAATAGAATTGA TERM 101 155930 - 155905 - G 81 -10.5 -2.97503 | overlap 155904 CCAAGATAGAATAAC CGGTACCAATA CTAA TATTGGTCCCG CAGTGAATAGAATTG gltA 157452 - 156307 - | methylcitrate synthase TERM 102 157316 - 157298 - G 90 -6 -5.59655 | CAAATTAATAAAAAA GCAGTCTC TAA GAAACTAC TTTTCTGTGCTAATT PMM0162 158989 - 157532 - | hypothetical protein PMM0163 159071 - 159421 + | hypothetical protein trpB 160666 - 159422 - | tryptophan synthase subunit beta PMM0165 160714 - 161025 + | translation initiation factor SUI1 cysC 161069 - 161695 + | adenylylsulfate kinase purE 162202 - 161711 - | phosphoribosylaminoimidazole carboxylase chlM 162339 - 163040 + | Mg-protoporphyrin IX methyl transferase PMM0169 163770 - 163042 - | two-component response regulator TERM 103 163774 - 163790 + H 75 -5.3 -4.94058 | AGTGTCATTCATTTT TTTAATT TTG AATTAAA TTTTCTTTAGCTTAA TERM 104 164041 - 164031 - g 77 -4 -5.45056 | CTAAAAAAAAAGAAA GTAA TTT TTAC TAGTGGAGCAACAGA PMM0170 163827 - 164975 + | NifS-like aminotransferase class-V PMM0171 165886 - 164984 - | hypothetical protein ndhH 165925 - 167112 + | NAD(P)H-quinone oxidoreductase subunit H PMM0173 167121 - 167573 + | hypothetical protein menE 168804 - 167587 - | putative O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase) menC 169754 - 168789 - | putative O-succinylbenzoate synthase TERM 105 169272 - 169282 + g 84 -5.4 -5.4505 | TAAATGATTTAGTAT CTCT ATT AGAG TTTTTTCTTCGGAGA menA 170668 - 169751 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 106 170638 - 170649 + g 71 -3 -5.20222 | GCCATTTTATTGCTT GTTT CCAT AAAC TTTTATTTCTTTCAT menF 170770 - 172167 + | isochorismate synthase gshB 173083 - 172160 - | glutathione synthetase PMM0179 173343 - 173089 - | glutaredoxin TERM 107 174291 - 174279 - g 70 -6.3 -4.19947 | CAAAATAAGGAGAAA GCAAT GTT ATTGC TTAAAGCTAAATTAT prfB 173420 - 174542 + | peptide chain release factor 2 TERM 108 174618 - 174580 - g 88 -3.3 -5.97575 | gap 1, overlap 174571 AATTTAGAAAAAAAA GTTTCTCCT-CCTAGCTT TATA AAACTAGCTATGAGAAAC ATGGTTAGGAAGGGT PMM0181 174547 - 174729 + | hypothetical protein PMM0182 174737 - 175279 + | hypothetical protein dgkA 175302 - 175718 + | diacylglycerol kinase pabA 175726 - 176322 + | para-aminobenzoate synthase component II PMM0185 176344 - 177072 + | hypothetical protein hisC 178178 - 177069 - | aminotransferase class-I argS 179989 - 178178 - | arginyl-tRNA synthetase TERM 109 179084 - 179074 - G 71 -3.2 -5.1356 | TGCCATCAAGAAAAA CACA TTT TGCG CCTTGATCTTCTATT nadC 180883 - 180017 - | nicotinate-nucleotide pyrophosphorylase:quinolinate phosphoriobsyl transferase TERM 110 180068 - 180046 - G 77 -8.6 -3.73858 | overlap 180034 GCATACTAAAATCAA TCCAATTACT TTT AGTAATTGAA GAACTTGTTGAAATC TERM 111 180374 - 180386 + g 70 -4.1 -4.96388 | TTTCAAGTTATCAGT CCATG CAA TATGG TTTTCTTTAATCATT trmE 182341 - 180959 - | tRNA modification GTPase TrmE TERM 112 181424 - 181443 + g 72 -5.8 -4.4715 | GATTATATAGTCTGA GTTTTGAA TCAT TTCAAAGC TTTTATCAATTCCAA TERM 113 182553 - 182585 + G 72 -3.5 -5.15167 | opp_overlap 182580, overlap 182575 182580 TTCAAACTTTATTAG GATTATTTTTAGCAA GAG TTGCGAAAGGAAATC TTTTTCTTGCTGCTA PMM0190 182408 - 182860 + | hypothetical protein spoT 185189 - 182880 - | guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase PMM0192 185245 - 186840 + | ABC transporter ATP-binding protein rluD 187794 - 186826 - | putative pseudouridylate synthase specific to ribosomal large subunit rbgA 188657 - 187791 - | ribosomal biogenesis GTPase TERM 114 188270 - 188248 - G 77 -10 -2.57244 | CTATTTATTAATGCA GATTTTCCTA CAT TAGGAAAACC GAGGGTAAGTGCTCT TERM 115 188724 - 188747 + H 93 -4.1 -6.4275 | opp_overlap 188724, overlap 188717 TCAAAAGTTATTATA TTTAATATT AATGTA AATATTAAA TTTTTTTTATTTTTA TERM 116 189386 - 189401 + G 73 -4.6 -5.06414 | opp_overlap 189387, overlap 189387 TACAAAATTTTTAGA ACCTGC TGTT GCAGGA TTTTTGTTAGAAAAA TERM 117 189387 - 189400 + G 75 -8.1 -3.63367 | opp_overlap 189387, overlap 189386 ACAAAATTTTTAGAA CCTGC TGTT GCAGG ATTTTTGTTAGAAAA TERM 118 189400 - 189387 - g 71 -8.1 -3.36919 | opp_overlap 189386 189387 ACAAAATTTTTAGAA CCTGC TGTT GCAGG ATTTTTGTTAGAAAA pgk 188883 - 190091 + | phosphoglycerate kinase PMM0196 190824 - 190093 - | hypothetical protein TERM 119 191387 - 191401 + G 74 -5.7 -4.59414 | CAAAATGGGTTCCAA GAGGA AAGGG TCCTC TTTTGATTGTTATGG TERM 120 191598 - 191582 - g 86 -9.5 -3.967 | AATTTACTAATCAAA TTGCATC TTT GATGCAA AACTGTGAACTCGTT murG 190852 - 191946 + | undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase hisC/cobC 193049 - 191925 - | aminotransferase class-I TERM 121 192488 - 192509 + g 80 -5.3 -5.26316 | overlap 192484 192490 TAACTAGTTTATATT TTTTTAGAA TAAT TTCTAAAGA TTTTTTATCCCATAA TERM 122 192591 - 192612 + g 72 -3.7 -5.22794 | overlap 192609 TTTAATTGGAAAGGT TTGGGGAAA ACTA TTGCTCCAA TTTTTTGGTAATTCT pyrD 194234 - 193065 - | dihydroorotate dehydrogenase 2 rnhA 194971 - 194249 - | ribonuclease HI TERM 123 194973 - 195009 + r 70 -3.8 -5.186 | opp_overlap 194981, overlap 194974 195004 TGTTGACTATTCATA ATTTTAAAGCCGATAT TAGGT ATATCGGCTAGAAAAA TTTTTCTCTATTTTA TERM 124 194974 - 195008 + r 70 -7.3 -3.6872 | opp_overlap 194981, overlap 194973 195004 GTTGACTATTCATAA TTTTAAAGCCGATAT TAGGT ATATCGGCTAGAAAA ATTTTTCTCTATTTT TERM 125 195001 - 194981 - R 90 -9.8 -3.69621 | opp_overlap 194974 194973 ATTCATAATTTTAAA GCCGATAT TAGGT ATATCGGC TAGAAAAATTTTTCT rplL 195412 - 195017 - | 50S ribosomal protein L7/L12 rplJ 195968 - 195441 - | 50S ribosomal protein L10 rplA 196868 - 196161 - | 50S ribosomal protein L1 rplK 197360 - 196935 - | 50S ribosomal protein L11 TERM 126 197404 - 197440 + r 75 -8.3 -3.56099 | AAATGATTAATTTAC TCGATAAACAGAAATAA TAA TTAATTTTGTTTATTGA TTTGGGAGAATTCTA nusG 198035 - 197424 - | transcription antitermination protein NusG secE 198349 - 198110 - | preprotein translocase subunit SecE clpB2 201172 - 198413 - | putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB TERM 127 200494 - 200506 + g 82 -7.7 -4.58283 | CTCGCCCTATTACTG GGTCT AGC AGACC TTTTTCAGCAGATTC TERM 128 201040 - 201026 - G 87 -4.3 -5.75822 | TATAAATGAAAAAAA TTCAC TTGAG GTGAA CAAAGTATGAATAAT TERM 129 201384 - 201374 - H 80 -2.6 -6.02546 | opp_overlap 201374, overlap 201365 TGAAATCAAAAAAAA TAAT TTG ATTA TCTTCTTTATATTTC eno 201456 - 202748 + | enolase PMM0209 204419 - 202752 - | putative kinase TERM 130 203816 - 203831 + g 74 -6.2 -4.43221 | opp_overlap 203816 CACATTTAAAATCTA GTTCTT TCAT AAGAAC TTTTCTACACTCTTT TERM 131 204425 - 204435 + r 70 -4 -5.09762 | opp_overlap 204425 TATTAGTCATTAAAT TGAA TTA TTCA TTTTTCTATTAAAGT PMM0210 204736 - 204419 - | hypothetical protein TERM 132 204643 - 204657 + g 91 -7.2 -5.252 | CATCTTGAGCAATGT TTGAAG CTT CTTCAA TTTTTTCTACGACTA TERM 133 205344 - 205367 + G 70 -8.2 -3.08812 | overlap 205343 GGGCTATGGGGAGAC CTGCTTCTTT TAAA GGAGAAGCAG ATTTCTTAGGAAAGG TERM 134 205949 - 205921 - g 72 -2.5 -5.38321 | opp_overlap 205942, overlap 205923 205942 AAATAGTAGAAAAAA TATAAGAGTAGAT TGG ATACACTCTTAAA GAGTTTATAAAATAA trxB 204992 - 205948 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase PMM0212 206252 - 205971 - | hypothetical protein sbtA 207254 - 206256 - | putative sodium-dependent bicarbonate transporter PMM0214 208916 - 207261 - | putative sulfate transporter TERM 135 208292 - 208271 - G 70 -4.5 -4.77757 | opp_overlap 208275, overlap 208275 CGCCAAAAATTAAAA TTGATAGTG GAGT CACTATTAA TAAGGCTAGAAGAGG PMM0215 209144 - 210145 + | delta-aminolevulinic acid dehydratase PMM0216 210201 - 210593 + | glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein TERM 136 212295 - 212274 - g 70 -4.4 -4.87052 | opp_overlap 212273 212274 GATAAAGCAACAAAA TTCGGCAG AAGAGG CTGCTGAA CTTATAGCTAGAACA mutS 210607 - 213018 + | DNA mismatch repair protein MutS family protein TERM 137 213342 - 213329 - g 74 -6.7 -4.2361 | AATACAATCCTAAAA GTTCC TTGT GGAAC AGAAATTAGAGATTT obgE 213062 - 214045 + | GTPase ObgE PMM0219 214133 - 214315 + | hypothetical protein TERM 138 214383 - 214403 + T 77 -6.8 -4.68528 | opp_overlap 214385, overlap 214380 214385 AAAAATAAAAAAGGA AAGGGGCT AATAA AGCCCCTA TTATTTTTTACATTT TERM 139 214401 - 214385 - T 93 -9.4 -4.53334 | opp_overlap 214385 214383 214380 AAATAAAAAAGGAAA GGGGCT AATAA AGCCCC TATTATTTTTTACAT TERM 140 214385 - 214401 + T 86 -9.4 -3.92369 | opp_overlap 214385, overlap 214383 214380 AAATAAAAAAGGAAA GGGGCT AATAA AGCCCC TATTATTTTTTACAT PMM0220 214656 - 214432 - | hypothetical protein PMM0221 215729 - 214782 - | glutathione S-transferase C terminus TERM 141 216361 - 216326 - g 72 -3.4 -5.23016 | opp_overlap 216334, overlap 216329 216330 AAACAAGTTAAAAAA TAATCAAATAAGACTT CCGA AAGACTTATTTGTCCA TGTTCATCAAGGAAG TERM 142 216357 - 216330 - g 76 -8.6 -3.38677 | opp_overlap 216334, overlap 216329 216326 AAGTTAAAAAATAAT CAAATAAGACTT CCGA AAGACTTATTTG TCCATGTTCATCAAG PMM0222 215754 - 216641 + | aspartoacylase TERM 143 217018 - 217002 - g 83 -10.9 -2.92371 | opp_overlap 217001 217002 217005, overlap 217005 ATTGACGGAATTAGA GAACCAG TTG CTGGTTC ATTCCTATACGGAAA TERM 144 217002 - 217018 + G 82 -10.9 -2.55351 | opp_overlap 217002 217005, overlap 217001 217005 ATTGACGGAATTAGA GAACCAG TTG CTGGTTC ATTCCTATACGGAAA TERM 145 217508 - 217492 - g 76 -7.3 -4.18421 | TAATCAGAGAAACAA CTGAGAC AGA ATCTCAG AACTATGGTTACAAG psbA 216807 - 217889 + | photosystem II PsbA protein (D1) TERM 146 217930 - 217911 - f 75 -7.8 -3.85567 | opp_overlap 217890 217889 217911 AATTCTAAATTTAAA GCCTCCTT TTAT AAGGGGGC TTTTTTTTTATGTTT TERM 147 217911 - 217930 + F 100 -10 -6.38655 | opp_overlap 217911, overlap 217890 217889 AATTCTAAATTTAAA GCCTCCTT TTAT AAGGGGGC TTTTTTTTTATGTTT TERM 148 218522 - 218512 - g 74 -4 -5.12987 | overlap 218513 GTAAATAAAAATAAA CTTA CTC TAAG TAAAATAGATTCAAA TERM 149 218924 - 218908 - g 70 -7.3 -3.58731 | AAAATAGCTTTTAAA CCAACAG CAA CTATTGG AAAAGAGCAGAAAAC aroC 218002 - 219096 + | chorismate synthase PMM0225 219748 - 219107 - | 2-keto-3-deoxy-6-phosphogluconate aldolase ftsH2 221616 - 219760 - | cell division protein FtsH2 cysD 222838 - 221663 - | ATP-sulfurylase TERM 150 222857 - 222905 + r 76 -8.6 -3.66921 | gap 1, opp_overlap 222857 222872, overlap 222872 ATGATTTGTATAAGA TAAATTAAAAAAAAAGAGGGCTT GTTT AAACCCTCTTTTTTTAT-ATTTA TTTAGAATTAAGCTT TERM 151 222905 - 222857 - R 87 -10.8 -3.22653 | gap 1, opp_overlap 222857 222872, overlap 222872 ATGATTTGTATAAGA TAAATTAAAAAAAAAGAGGGCTT GTTT AAACCCTCTTTTTTTAT-ATTTA TTTAGAATTAAGCTT TERM 152 222872 - 222891 + r 93 -6.4 -5.90231 | opp_overlap 222857 222872, overlap 222857 TAAATTAAAAAAAAA GAGGGCTT GTTT AAACCCTC TTTTTTTATATTTAT TERM 153 222891 - 222872 - R 100 -8.6 -6.28631 | opp_overlap 222872 222857, overlap 222857 TAAATTAAAAAAAAA GAGGGCTT GTTT AAACCCTC TTTTTTTATATTTAT psbO 223707 - 222913 - | photosystem II manganese-stabilizing protein dfp 225178 - 223922 - | putative p-pantothenate cysteine ligase and p-pantothenenoylcysteine decarboxylase PMM0230 225389 - 225168 - | hypothetical protein PMM0231 225590 - 225772 + | hypothetical protein PMM0232 225809 - 226150 + | hypothetical protein pyrB 227169 - 226153 - | aspartate carbamoyltransferase catalytic subunit TERM 154 226570 - 226554 - G 75 -8 -3.72027 | ATTCTTCAGGAATAA GTGTGG GTGGA CCACAC AAGATTATGTTTGCC TERM 155 227125 - 227095 - G 74 -9.2 -3.06312 | opp_overlap 227087 227104 AAATCTTTCAGTTAA CTCAATAACTGATT CGT AATCATCTATTGAG AAATTTGAAAGTGTG PMM0234 227666 - 227169 - | methylpurine-DNA glycosylase (MPG) gatC 227987 - 228280 + | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 156 228602 - 228625 + F 75 -5.4 -5.04249 | ATTCAAAAAATTGCC TGGATAAACT CTTG AATTTATCCA TTTATTTTTTGAGCG TERM 157 229445 - 229433 - f 70 -3.5 -5.27477 | opp_overlap 229433 ATCTTAAGTAAAAAA TATTT TTA AAATA TACCTTGCTAAACTA TERM 158 229924 - 229942 + G 74 -3.2 -5.40072 | opp_overlap 229924 CTGACTTTAGAGGAA TTGAAAAA AAA TCTTTCAA TTTTTTTAAAGGCCA TERM 159 229962 - 229976 + G 74 -4.2 -5.15969 | TTTAAAGGCCATCTC TCTAGC AAG GCAAGA TTTTTTAAATTCAAA PMM0237 229639 - 230163 + | hypothetical protein ileS 230206 - 233103 + | isoleucyl-tRNA synthetase PMM0239 233893 - 233270 - | hypothetical protein trmB 234019 - 234648 + | tRNA (guanine-N(7))-methyltransferase PMM0241 236008 - 234650 - | phosphotransferase superclass txlA 236138 - 236683 + | thioredoxin-like protein TxlA thyX 237324 - 236686 - | FAD-dependent thymidylate synthase dcd 237919 - 237326 - | deoxycytidine triphosphate deaminase PMM0245 238500 - 237925 - | cob(I)alamin adenosyltransferase TERM 160 238425 - 238435 + g 72 -2.6 -5.48623 | TTATCTTTCTTAATT TAAA TTC TTTA TTTTTATTTATGTTT ntcA 238705 - 239439 + | CRP family global nitrogen regulatory protein TERM 161 240125 - 240103 - g 74 -5.6 -4.89838 | overlap 240104 GTAATAAATATAAAA TCTGTCAGAA ATG TTCTAACAGG AGAAAATTTTGTGTA TERM 162 240124 - 240104 - g 78 -9.1 -3.52276 | overlap 240103 TAATAAATATAAAAT CTGTCAGAA ATG TTCTAACAG GAGAAAATTTTGTGT TERM 163 240388 - 240374 - g 78 -5.8 -4.73912 | ATAAAAATGATAAAA CTAATT TTG AATTAG AAGCAGTCTCTTTGT PMM0247 239494 - 240465 + | hypothetical protein PMM0248 240466 - 240903 + | hypothetical protein PMM0249 241141 - 240884 - | hypothetical protein pth 241753 - 241142 - | peptidyl-tRNA hydrolase psbH 242141 - 241941 - | photosystem II reaction center protein H psbN 242221 - 242373 + | photosystem II reaction center protein N PMM0253 242502 - 242630 + | photosystem II reaction center I protein I TERM 164 242619 - 242607 - f 74 -6.3 -4.69326 | ACACCTAATAGAAAA GACTT AGA AAGTC CTCAAGATTAATTTT TERM 165 243135 - 243119 - g 70 -8.1 -3.1505 | opp_overlap 243119 243118 AGTATTGGTGAGCAA CTATTCA AGA TGAATAG ATTTCAATATGATTT TERM 166 244190 - 244176 - g 79 -5 -5.23316 | CATCAGATCAAAAAA TACCAC TAA ATGGTA ATAAGGTTTTAAACA PMM0254 242645 - 244681 + | hypothetical protein leuD 245305 - 244685 - | 3-isopropylmalate dehydratase small subunit leuC 246711 - 245302 - | isopropylmalate isomerase large subunit PMM0257 248026 - 246725 - | molybdenum cofactor biosynthesis protein TERM 167 247236 - 247255 + gr 77 -4.4 -5.27335 | opp_overlap 247236 TCACCAAAAATAAAT TTGGAAAA CTCT TTTTTCAA TTTTTCTTTAACGGG glyA 249266 - 247995 - | serine hydroxymethyltransferase PMM0259 249507 - 249758 + | hypothetical protein PMM0260 249768 - 250049 + | hypothetical protein TERM 168 250045 - 250061 + T 75 -6.7 -4.45945 | opp_overlap 250047, overlap 250053 AAATACTTGGTAATT TATGATT CTT AATCATA TTTTGATTAGTGGAT PMM0261 251637 - 250057 - | hypothetical protein TERM 169 250799 - 250788 - G 72 -5.8 -4.37658 | opp_overlap 250787 250788 AAGCGTTTGATAAAA CTCC CAGT GGAG CTTGTATAAGAAAAT TERM 170 251387 - 251356 - G 75 -2.5 -5.55769 | gap 1 TCCTAGAATAAAAAA TAACAA-AGTCAGT TTAAT ACTTACTTTTGTTA ATACGAGGCCCCCCT PMM0262 251711 - 252457 + | putative sugar fermentation stimulation protein TERM 171 252594 - 252605 + F 81 -5.8 -5.41143 | opp_overlap 252594 ATATATGAAAGGAAA CAGG ACCT CCTG TTTTTTTGCAGACTA TERM 172 252663 - 252651 - g 78 -9.1 -3.53444 | CCACTGCTTTGCAAA CGCCT CAA AGGCG CTCTAGGTCCAAACT TERM 173 253433 - 253421 - g 72 -9.1 -2.66272 | overlap 253417 TCCGATGGAAAGCCA CAGGC TAT GCCTG GTCACAATATGGCTA amt1 252632 - 254092 + | ammonium transporter TERM 174 254114 - 254137 + F 100 -10.4 -5.78622 | opp_overlap 254114 254118 TTTAAGTAAATTCAA GAAATCTGAC TTAT GTCAGGTTTC TTTTTTTTGCAATAA TERM 175 254137 - 254114 - f 74 -8.2 -3.33399 | opp_overlap 254114, overlap 254118 TTTAAGTAAATTCAA GAAATCTGAC TTAT GTCAGGTTTC TTTTTTTTGCAATAA lytB 254182 - 255378 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase PMM0265 255473 - 256033 + | hypothetical protein purH 257588 - 256035 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 176 258186 - 258168 - g 87 -10.4 -3.76048 | opp_overlap 258168 TGCGAATTAATAGAA TTTGATGG ATC CCATCAAA TTGATTCAGGTTTAA TERM 177 258168 - 258186 + G 85 -10.4 -3.3907 | opp_overlap 258168 TGCGAATTAATAGAA TTTGATGG ATC CCATCAAA TTGATTCAGGTTTAA PMM0267 257622 - 258239 + | esterase PMM0268 258604 - 258236 - | hypothetical protein TERM 178 258626 - 258647 + H 73 -5.3 -4.8083 | opp_overlap 258626 GTACTCCAAGAATTA TAAATGAGA TTAG TCTTATTTA TTTTTACTAATCTTA PMM0269 258843 - 259979 + | two-component sensor histidine kinase CobS 260697 - 259957 - | cobalamin-5-phosphate synthase CobS tgt 260796 - 261914 + | tRNA-guanine transglycosylase PMM0272 261948 - 262088 + | photosystem II reaction center protein K PMM0273 263107 - 262103 - | putative oxidoreductase PMM0274 264426 - 263158 - | hypothetical protein pyrE 264658 - 265218 + | orotate phosphoribosyltransferase PMM0276 265222 - 266070 + | hypothetical protein PMM0277 267497 - 266079 - | putative nuclease (RecB family) TERM 179 267466 - 267486 + g 72 -2.7 -5.40072 | CATCTTATAAAACTT TTTAAATAA AGA TTATTCAAA TTTTTTTGCAAAGGC PMM0278 267567 - 269027 + | phosphotransferase superclass TERM 180 269460 - 269474 + G 82 -8.6 -4.07687 | GAGGAAAAGGGGGTT TTGGGT ATG ACCCAA TTTTCGAGGAGAGAT PMM0279 269024 - 269599 + | hypothetical protein PMM0280 271125 - 269602 - | retinal pigment epithelial membrane protein TERM 181 269952 - 269915 - G 89 -9.3 -4.43477 | opp_overlap 269906 269905, overlap 269909 269917 GCCATCCAACTAAAA GTTGCTGTTAGTCCTAA GTTT TTAGGATTAACAACAGC AAATTCACAACATTG TERM 182 269950 - 269917 - G 79 -10.5 -2.54881 | opp_overlap 269906 269905, overlap 269909 269915 CATCCAACTAAAAGT TGCTGTTAGTCCTAA GTTT TTAGGATTAACAACA GCAAATTCACAACAT TERM 183 270761 - 270776 + g 76 -3.4 -5.5112 | CCAAAAACACCTCTA TAAATA AATT TATTTA TTTTTTCTTCCTCCA hisB 271764 - 271159 - | imidazoleglycerol-phosphate dehydratase fabI 272567 - 271785 - | enoyl-(acyl carrier protein) reductase TERM 184 272696 - 272731 + G 72 -8.6 -3.1154 | overlap 272694 272704 AAACAAATTCTATGG TTTTGGAATTAGGT TTTCAATT ACCTAATTTCAAAA TGTTAAATGCTAATT PMM0283 272674 - 273267 + | hypothetical protein degT 273321 - 274526 + | putative pleiotropic regulatory protein phr 275947 - 274511 - | putative DNA photolyase PMM0286 276507 - 275944 - | NUDIX hydrolase TERM 185 276240 - 276254 + g 82 -8.6 -4.02334 | opp_overlap 276240 TTTGAATTGAATTAA TAGGTG TTT CACCTA TTTCTAATGTACCTG TERM 186 276254 - 276240 - G 76 -8.6 -3.4052 | opp_overlap 276240 TTTGAATTGAATTAA TAGGTG TTT CACCTA TTTCTAATGTACCTG TERM 187 276581 - 276593 + r 74 -4.9 -5.1925 | GTCCATTTTGGGGCA TCAAA CTT TTTGA TTTTTTGGCTTCTAC folK 277122 - 276559 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 188 278713 - 278746 + G 74 -5.3 -4.88485 | opp_overlap 278706 278718, overlap 278714 GAAAATGACTTTAGG GCAAAGCTCCTTC AAAAACAA GCAGGAGCTTTGG TTATTTTTTTAGTTG TERM 189 278714 - 278745 + G 76 -8.8 -3.50651 | opp_overlap 278706 278718, overlap 278713 AAAATGACTTTAGGG CAAAGCTCCTTC AAAAACAA GCAGGAGCTTTG GTTATTTTTTTAGTT chlD 277171 - 279333 + | protoporphyrin IX magnesium chelatase subunit ChlD PMM0289 280184 - 279339 - | putative ABC transporter TERM 190 279563 - 279578 + g 73 -7.6 -3.72968 | overlap 279569 CTGCTGCAATGGTTA CCTCTT TTAT AAGAGG TTTAACTCTAATAAT PMM0290 281008 - 280190 - | ABC transporter ATP-binding protein TERM 191 280657 - 280669 + g 71 -7.7 -3.40709 | overlap 280656 TTTTATTCTTTTGGA GTAGG AAT CCTAC ATTTTCTTCAATAGT TERM 192 281599 - 281574 - g 70 -4 -5.07107 | opp_overlap 281591, overlap 281579 281591 GAAAGGCCTAAAAAA CTACAGCAGT AATATA ACTGCAATAG TTACAGTTTCAGATG TERM 193 282055 - 282037 - g 70 -8.2 -3.05069 | overlap 282034 282039 GCTATTAAAGAAGCA GACCTAAT AAT ACTAGGTC CAGGAAGTCTTTATA PMM0291 281164 - 282486 + | hypothetical protein ndhJ 283025 - 282495 - | NADH dehydrogenase subunit J ndhK 283759 - 283025 - | NADH dehydrogenase subunit B ndhC 284126 - 283764 - | NADH dehydrogenase subunit A rub 284199 - 284627 + | putative rubredoxin PMM0296 284637 - 285650 + | Ycf48-like protein TERM 194 285845 - 285829 - g 76 -9.5 -3.02371 | opp_overlap 285828 285829, overlap 285840 TCTTTGAAATAATCA CCAGTAT CAG ATACTGG ATTATTCATGCAGTA TERM 195 285829 - 285845 + G 75 -9.5 -2.83371 | opp_overlap 285829 285840, overlap 285828 TCTTTGAAATAATCA CCAGTAT CAG ATACTGG ATTATTCATGCAGTA psbE 285777 - 286031 + | cytochrome b559 subunit alpha psbF 286034 - 286177 + | cytochrome b559 subunit beta psbL 286189 - 286308 + | photosystem II reaction center L psbJ 286318 - 286512 + | photosystem II reaction center protein J TERM 196 286565 - 286608 + TF 88 -8.4 -4.8143 | opp_overlap 286570, overlap 286570 CCCCAATAAGAATCT GTAAATATCTTTAGTTTTTC TTTT GTAAAACTAGGGATATTTTC TTTTTGAGTTATTAA TERM 197 286570 - 286603 + TF 87 -6.9 -5.29885 | opp_overlap 286570, overlap 286565 ATAAGAATCTGTAAA TATCTTTAGTTTTTC TTTT GTAAAACTAGGGATA TTTTCTTTTTGAGTT PMM0301 287469 - 286546 - | 5'-methylthioadenosine phosphorylase TERM 198 287741 - 287729 - gR 84 -3.5 -5.86332 | TTAAGTTAAAAAAAA TTTTT TTA AAAAA TAGACCATCAATTTG TERM 199 288396 - 288407 + Gr 70 -4.4 -4.82678 | opp_overlap 288396 TTCTTATCCTAGAAA GCTT CCGA AAGC TTTTGCTTTTTATGG TERM 200 288491 - 288473 - gR 71 -3.2 -5.27023 | overlap 288477 ATCTTAAAAATAAAA TTGATGAA GGC TTCATAAA GAAATTTCGTATTTT TERM 201 289424 - 289385 - gR 76 -8.2 -3.69088 | gap 1, opp_overlap 289389 289391 289392, overlap 289391 289392 TAATACACAAAGGAA TCAAA-AGTTCTCTATTCG AAT CGAATAAAGAAATATTTGA TCAAATTATTGCAGA TERM 202 289417 - 289391 - gR 79 -7.4 -4.53774 | opp_overlap 289389 289391 289392, overlap 289385 289392 ACAAAGGAATCAAAA GTTCTCTATTCG AAT CGAATAAAGAAA TATTTGATCAAATTA TERM 203 289392 - 289416 + Gr 72 -8.7 -2.67439 | opp_overlap 289391 289385 289392, overlap 289391 289389 CAAAGGAATCAAAAG TTCTCTATTCG AAT CGAATAAAGAA ATATTTGATCAAATT TERM 204 289416 - 289392 - gR 93 -10.9 -3.30638 | opp_overlap 289392 289391 289389, overlap 289391 289385 CAAAGGAATCAAAAG TTCTCTATTCG AAT CGAATAAAGAA ATATTTGATCAAATT selD 287431 - 289623 + | selenide,water dikinase PMM0303 290874 - 289627 - | tRNA nucleotidyltransferase/poly(A) polymerase TERM 205 290681 - 290667 - G 76 -8.6 -3.51411 | overlap 290663 ATTTTGCTAAATCAA CAGAAG ATC CTTCTG TAACTATATCAATAT uvrD 293290 - 290882 - | UvrD/REP helicase cpeB 293710 - 294237 + | phycobilisome protein cpeS 294772 - 294221 - | phycoerythrin linker protein CpeS-like protein PMM0307 294926 - 294747 - | hypothetical protein PMM0308 295677 - 295042 - | hypothetical protein PMM0309 295903 - 296322 + | Pollen allergen TERM 206 296369 - 296355 - T 100 -7.8 -5.96219 | opp_overlap 296355 TATTCATAAAAAAAA CCCGTC AAA GACAGG TTTATAAAGGTGCCA TERM 207 296410 - 296426 + T 72 -8.7 -2.62616 | TTGAACTGGGGACAC GGCGATT TTC AGTCGCC TGCTCTACCAACTGA PMM0310 297776 - 296547 - | carbohydrate kinase metK 299024 - 297783 - | S-adenosylmethionine synthetase TERM 208 299060 - 299032 - R 75 -9.1 -3.18912 | opp_overlap 299035, overlap 299035 TCACTCATTTATTAA TAATTTAGGAATA AAC TAATCCTAAATTA AATCGTAAATATTAA rps1a 300250 - 299159 - | 30S ribosomal protein S1 PMM0313 300837 - 300358 - | transcriptional regulator NrdR TERM 209 300928 - 300909 - R 100 -10 -5.77853 | opp_overlap 300909 AAGTGGTAAAAAAAA CCCCCCTA TTTA TAGGAGGG TTTTTTTTTACTTTA TERM 210 300909 - 300928 + r 100 -7.8 -6.28631 | opp_overlap 300909 AAGTGGTAAAAAAAA CCCCCCTA TTTA TAGGAGGG TTTTTTTTTACTTTA psbT 301039 - 300941 - | photosystem II reaction center protein T TERM 211 301069 - 301057 - R 70 -4.9 -4.89605 | GAAAAAAATAATAAA GTTTA AAT TAAAC CCTTCCTGGGATTCG psbB 302587 - 301064 - | photosystem II PsbB protein (CP47) TERM 212 302496 - 302484 - G 87 -10.5 -3.58869 | TATAAAGCCATAGAA CCGGC CCA GCCGG CTAATAATGCAGTAT PMM0316 302812 - 303174 + | ferredoxin psbM 303280 - 303432 + | photosystem II reaction center M protein (PsbM) TERM 213 303609 - 303597 - g 79 -3.5 -5.68039 | opp_overlap 303604, overlap 303581 303604 AAATTTAGAAAAAAA TTTAA ATT TTAAA GTAAATTTAGATTTG hemK 303445 - 304314 + | putative protein methyltransferase TERM 214 304374 - 304356 - g 74 -5.4 -4.84527 | GTCATAGATCAAAAA TTAGCTTT AGA AAAACTAA ATAGTGGATCCCCTA PMM0319 304335 - 304919 + | hypothetical protein minE 305553 - 305233 - | septum site-determining protein MinE minD 306371 - 305556 - | putative septum site-determining protein MinD minC 307151 - 306489 - | septum site-determining protein PMM0323 308411 - 307152 - | hypothetical protein TERM 215 307413 - 307423 + g 74 -4 -5.1417 | opp_overlap 307413 TCTGGCAAAAGCTAA GATT TCT AATC TTTTTAATTTTGTGA ctpA 309735 - 308446 - | carboxyl-terminal protease petB 309806 - 310462 + | cytochrome b6 petD 310505 - 310987 + | cytochrome b6-f complex subunit IV PMM0327 312430 - 310994 - | putative neutral invertase-like protein TERM 216 311907 - 311896 - G 72 -5.8 -4.41047 | AGTCTGGAACGAAAA GGAC AGGT GTCC CCTCAAATGTTGGAT TERM 217 314160 - 314140 - R 75 -8.2 -3.53733 | GGCACTCTAGAAAGA CCGCCGGT GATAA ACCGGAGG AAGGTGTGGATGACG TERM 218 314510 - 314491 - R 75 -9.2 -2.65808 | overlap 314487 314488 AGTCGTAACAAGGTA GCCGTACC GGAA GGTGCGGC TGGATCACCTCCTAA TERM 219 315054 - 315068 + r 70 -7.2 -3.72324 | TCTATTAAGCTGATG CTTCAA TTA TTGAAG TTATTGGTCAAGCTA TERM 220 315353 - 315334 - R 91 -10.8 -3.66803 | opp_overlap 315333 315332 GGGGAATAGCCCAAA CCGATAGT CTTG ACTATCGG GGTTGTGGGACAGCA TERM 221 315589 - 315578 - R 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACAT TERM 222 316376 - 316358 - R 70 -6 -4.21194 | CTTGAGTAGCGAAAA CATGGG TGAGAAT CCCATG CCCCGAAACCCTAAG TERM 223 317822 - 317810 - R 75 -9.1 -3.1634 | GCTGAAAGCATCTAA GTGGG AAG CCCAC CTCAAGATGAGTATT TERM 224 318170 - 318145 - R 100 -13.5 -3.63589 | opp_overlap 318145, overlap 318137 TAAAATATTTTTAAA GGGTTTACTTT GAAA AAAGTAAACCC TTTTTTACTTCTGAC TERM 225 318145 - 318170 + r 100 -13.5 -5.32944 | opp_overlap 318145 318137 TAAAATATTTTTAAA GGGTTTACTTT GAAA AAAGTAAACCC TTTTTTACTTCTGAC FPG 319053 - 318175 - | formamidopyrimidine-DNA glycolase (Fapy-DNA glycolase) psaE 319267 - 319058 - | photosystem I reaction center subunit IV PMM0330 320109 - 319348 - | LysM domain-containing protein PMM0331 321573 - 320182 - | putative aldehyde dehydrogenase PMM0332 321681 - 322274 + | rhomboid family protein rimI 322362 - 323249 + | GCN5-related N-acetyltransferase PMM0334 323599 - 323345 - | hypothetical protein TERM 226 323935 - 323955 + H 93 -3.3 -6.62203 | overlap 323936 ATTTAGTTTTTCTAA CTGTTTGAG TTT CTTAAACAA TTTTTTTTTTATTCT TERM 227 323936 - 323954 + H 75 -6.8 -4.51831 | overlap 323935 TTTAGTTTTTCTAAC TGTTTGAG TTT CTTAAACA ATTTTTTTTTTATTC TERM 228 324431 - 324420 - H 70 -4.4 -5.08601 | CTATTCCAAGAAAAA TTGC ACTT GCAA GAAGAATTTCAGAAA PMM0335 324602 - 325036 + | NADH-plastoquinone oxidoreductase chain 5 PMM0336 325542 - 325033 - | plastoquinol terminal oxidase PMM0337 326434 - 326126 - | hypothetical protein TERM 229 326402 - 326412 + g 70 -4 -5.12617 | TCTAACTATTTCCTG GATT TTT AATC TTTTTTGAGTACTTA PMM0338 327021 - 327320 + | hypothetical protein T8L23.23 329191 - 327659 - | phytoene dehydrogenase TERM 230 327945 - 327964 + g 70 -8 -3.07029 | ATATCAGGTATTATT TTTCTCAA AGAT TTGAGAAA TATTGAACATCTTTC TERM 231 329225 - 329195 - H 70 -4.9 -4.7497 | TTTATTCATCAAAAA TTAAACCCTAAGA ATAAA TCTTAAAGCTTAA ACAAAAGTGATTGTT TERM 232 329551 - 329533 - g 81 -3.2 -5.76237 | overlap 329526 CACAGAAATAAAAAA TTTAGAGA GTA TTTCTAAA AAAGATGGAAGTGGT PMM0340 329486 - 329986 + | hypothetical protein PMM0341 330206 - 329991 - | hypothetical protein PMM0342 330341 - 330625 + | helper component proteinase PMM0343 331322 - 331032 - | mttA/Hcf106 family protein PMM0344 331771 - 332010 + | hypothetical protein TERM 233 332024 - 332006 - f 72 -7.6 -3.53559 | opp_overlap 332005 332004, overlap 332005 332000 ATGAAAATATAAAAT TCTAAAAA TTA TTTTTAGA GATCTTAAATTTTTT PMM0345 332317 - 332766 + | putative bacterioferritin comigratory protein PMM0346 332811 - 333110 + | hypothetical protein PMM0347 333461 - 333117 - | hypothetical protein TERM 234 333624 - 333670 + r 81 -5.5 -5.40072 | gap 1, opp_overlap 333638 333668, overlap 333638 333668 AAAAAATTTATAAAT TAATTATGAAAAAAGACGGTTA AAAG TAACCGTC-TTTTTAGTAATAA TTTTTTTGAAAAAAA TERM 235 333638 - 333657 + r 100 -10.8 -4.7871 | opp_overlap 333638, overlap 333624 TTAATTATGAAAAAA GACGGTTA AAAG TAACCGTC TTTTTAGTAATAATT TERM 236 333657 - 333638 - R 100 -10.8 -5.2189 | opp_overlap 333624 333638 TTAATTATGAAAAAA GACGGTTA AAAG TAACCGTC TTTTTAGTAATAATT PMM0348 333927 - 333688 - | spectrin repeat-containing protein TERM 237 333812 - 333832 + g 73 -8.4 -3.39664 | overlap 333810 CTTTGGGTTGTGATT TCATCAAG TTCTT CTTGATGA TGGTTTTTCTTGAGT TERM 238 333974 - 333952 - H 73 -7.2 -4.10331 | opp_overlap 333952 TGAATTAAGTACAAA TCAAATATCT TAC AAATATTTGA ATCTTGTAAGGATAC PMM0349 334132 - 334548 + | hypothetical protein PMM0350 334655 - 334903 + | TIR domain-containing protein PMM0351 335406 - 335666 + | small, acid-soluble spore proteins, a PMM0352 336565 - 335687 - | abortive infection protein TERM 239 335763 - 335747 - G 87 -4.5 -5.75599 | opp_overlap 335750, overlap 335736 TAAATTATAAAAAAA CATCATT ATT AATAATG TTATTCCATAAAATC TERM 240 336511 - 336537 + g 74 -3.2 -5.4593 | overlap 336511 ATATTATTCTTGGTC TAAAAATTAAGA AAT TTTTAATTATTA TTTTTATTGTTTTGA PMM0353 337472 - 336639 - | glycosyl transferase family protein PMM0354 337713 - 338342 + | glycosyl transferase PMM0355 339039 - 339380 + | hypothetical protein TERM 241 339921 - 339896 - f 100 -11.3 -5.28176 | opp_overlap 339901 TGTATCCATAAAAAA GTAAATCGGCA TATT TACCGATTTAC TAAAAATCTAAAAAG TERM 242 340221 - 340242 + F 82 -5.8 -5.5943 | opp_overlap 340216 340221 ATAAAAAATTTAAAA GAGGACTG TTATTT CAGGCCTC TTTTTTTACTGATTT PMM0356 340325 - 341272 + | 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase PMM0357 341600 - 342223 + | TENA/THI-4 protein thiD 342256 - 343044 + | phosphomethylpyrimidine kinase TERM 243 343131 - 343151 + T 77 -7.1 -4.52143 | ACCACCATTTTTTAT TTTTATTTT TTA AAAATAAAA TTTCTTCTGTTTCCC PMM0359 343269 - 343111 - | hypothetical protein TERM 244 343656 - 343670 + H 95 -7.1 -5.8187 | AAGTCAATCGCTTAA GGCCT ATTTA AGGCC TTTTTTTATTAGATA PMM0360 344032 - 344496 + | hypothetical protein PMM0361 344527 - 344904 + | phosphoenolpyruvate carboxykinase PMM0362 344969 - 345265 + | hypothetical protein PMM0363 345420 - 345821 + | MarR family protein TERM 245 346699 - 346722 + F 82 -5.3 -5.46657 | TTTCTGATAATCAGG CACCCTTAT CTCTAA ATTAGGGTG TTTTTTATTGACATA TERM 246 346912 - 346896 - f 71 -6.5 -4.04394 | opp_overlap 346896 GTTAAACCAAGGAAA GACCTCT ATT AGGGGTC TTTTTTTTTATGCTT TERM 247 346896 - 346912 + F 100 -8.7 -6.2845 | opp_overlap 346896 GTTAAACCAAGGAAA GACCTCT ATT AGGGGTC TTTTTTTTTATGCTT PMM0364 347296 - 347616 + | malic enzyme TERM 248 347661 - 347646 - T 72 -9 -2.64735 | opp_overlap 347646, overlap 347648 AGTCGATCTATATTA GAGGGT TATA ACCCTC TTTTTTTTAATAGCA TERM 249 347646 - 347661 + T 100 -9 -5.86061 | opp_overlap 347646 347648 AGTCGATCTATATTA GAGGGT TATA ACCCTC TTTTTTTTAATAGCA PMM0365 348045 - 347668 - | DsrE-like protein PMM0366 348223 - 348627 + | type-1 copper (blue) domain-containing protein TERM 250 348803 - 348787 - f 100 -12.3 -5.65177 | opp_overlap 348787, overlap 348800 ATATCCATAAAAAAA GGGCGTT AAG AACGCCC TTTTTAAAAGCTAGA TERM 251 348787 - 348803 + F 100 -12.3 -4.58395 | opp_overlap 348787 348800 ATATCCATAAAAAAA GGGCGTT AAG AACGCCC TTTTTAAAAGCTAGA TERM 252 348946 - 348959 + F 86 -4.5 -5.96219 | AATCCCCATCACCTA GACTC GCAA GGGTC TTTTTTTTATGCCTA TERM 253 349293 - 349322 + G 72 -8.7 -3.01791 | opp_overlap 349287 349283 349301, overlap 349301 ATAAAGTGATTGAAG CTATGAAAGGAAC TGGG GTTCCTTTTAAAG TCTTCAAAACACAAT TERM 254 349301 - 349314 + G 74 -6.7 -4.1964 | opp_overlap 349287 349283 349301, overlap 349293 ATTGAAGCTATGAAA GGAAC TGGG GTTCC TTTTAAAGTCTTCAA PMM0367 348968 - 349357 + | hypothetical protein PMM0368 349691 - 349383 - | hypothetical protein TERM 255 351115 - 351129 + H 76 -2.1 -5.85737 | overlap 351103 TCTTTTTTGAATCTC GGAGT CATAA ACTTC TTTTTTTGTTGGTGT TERM 256 351738 - 351764 + H 75 -7.4 -4.35524 | overlap 351735 TCGGTCGATCACTTG GGTCTCATGA TTCAATT TTATGAGACC TTTTCCCTTTAAGAA PMM0369 352195 - 352527 + | ribosomal protein S14p/S29e TERM 257 352661 - 352651 - f 73 -2.6 -5.80817 | TTCAACATAAAAAAA TATT GAT AATA ATTAGATTCTTAAAT TERM 258 352922 - 352907 - f 74 -4.8 -5.16151 | TAAATCTAAGAAAAA TGTATT TGTT AATACA ACACAAGTGAAATTT TERM 259 353434 - 353451 + G 71 -8.5 -2.84317 | overlap 353433 AATACAAGGGCTTCA TCTCCTA TGGG TAGGAGA GCTTTTTTATCGAGT TERM 260 354205 - 354177 - g 81 -8.9 -3.86524 | AGAGCCTTGGATAAA TGAGCACCCTGAA ACT TTTAGAGCGCTCA ATAAATCAATTATCG PMM0370 352975 - 354660 + | putative cyanate ABC transporter, substrate binding protein TERM 261 355263 - 355247 - g 74 -9.5 -2.77899 | TTTTGCCAGCAATTA TGCCAAA TAT TTTGGCA GGCATGAGAATTTCT PMM0371 354691 - 355473 + | putative cyanate ABC transporter TERM 262 355553 - 355573 + G 77 -4.1 -5.4387 | opp_overlap 355554, overlap 355554 GCTAAACTAGGAAAA ATTTTTTTC AAA GAAAAAAAA TTTTTTGATTTCTAT TERM 263 355554 - 355572 + G 74 -7.6 -3.83882 | opp_overlap 355554, overlap 355553 CTAAACTAGGAAAAA TTTTTTTC AAA GAAAAAAA ATTTTTTGATTTCTA TERM 264 355572 - 355554 - g 87 -7.6 -4.84363 | opp_overlap 355554 355553 CTAAACTAGGAAAAA TTTTTTTC AAA GAAAAAAA ATTTTTTGATTTCTA TERM 265 356304 - 356289 - g 77 -3.2 -5.63236 | opp_overlap 356289 ATTTAAAAATAAAAA TGCGTC TTGA GAAGCA TTTATTAAGAGAAAC PMM0372 355490 - 356344 + | putative cyanate ABC transporter cynS 356377 - 356820 + | cyanate hydratase TERM 266 356882 - 356896 + T 76 -4.4 -5.30155 | opp_overlap 356893, overlap 356893 TTGTAAATTAGAATC TTTATT ATC AATAAA TTTTTTAATTAATCA PMM0374 357096 - 356905 - | mttA/Hcf106 family protein PMM0375 357196 - 357519 + | Type II intron maturase PMM0376 357903 - 357535 - | hypothetical protein PMM0377 358167 - 357904 - | hypothetical protein TERM 267 358189 - 358175 - R 83 -7.1 -4.99035 | opp_overlap 358175 TTAGGCATAGAAAAA GGAGC TAGTT GCTCC TTATTTTAGATCGAC TERM 268 358175 - 358189 + r 75 -7.1 -4.21812 | opp_overlap 358175 TTAGGCATAGAAAAA GGAGC TAGTT GCTCC TTATTTTAGATCGAC PMM0378 358490 - 358218 - | hypothetical protein TERM 269 358790 - 358805 + r 73 -5.4 -4.8048 | AATATTTTCTGTATA TCGGTA TTAA TGCCGA TTTTTAATATAGAAA PMM0379 359971 - 359690 - | hypothetical protein PMM0380 360486 - 360019 - | hypothetical protein PMM0381 361050 - 360886 - | hypothetical protein PMM0382 361597 - 361091 - | ribosomal RNA adenine dimethylase TERM 270 361832 - 361809 - R 78 -6 -5.0133 | overlap 361811 GATGTGGTTAAAAAA GGTATCCCAC TTAC ATGGGATATC CCAGATGGAATGGAT PMM0383 362733 - 361951 - | periplasmic protein spnII-interrupted-C 365496 - 363007 - | hypothetical protein TERM 271 363644 - 363624 - G 71 -6.9 -4.11216 | opp_overlap 363624 TTGTCATGTCCAAAA TTGATGTAG CAT CTACCTCAA TCATTGAGCTACCGT TERM 272 364742 - 364753 + g 74 -3 -5.41359 | TCCCATTTTATGGTG TGAA CCCA TTCA TTTTTTGGTTTAATT PMM0386 367616 - 366972 - | hypothetical protein TERM 273 367291 - 367303 + g 76 -3.5 -5.41143 | TTGTATTTATTCTCG TAAAA TTT TTTTA TTTTTTTAAAAAGTC TERM 274 367949 - 367923 - H 72 -7.5 -3.48395 | ACTTTTTTTAGATAA TTATGATGAAA TACGT TTCCATCATAA TCCCAAAAAAAATGG TERM 275 368213 - 368201 - H 72 -7.7 -3.61398 | TCTTTTTCCCAAGAA GTGCT GTT AGCAC TAGTCATTATAAAAA TERM 276 368378 - 368394 + H 83 -10.9 -2.62983 | opp_overlap 368390 TTGAACCCGAGACCT CTCCCTT ACC AAGGGAG TGCTCTACCGCTGAG aroD 368613 - 369053 + | 3-dehydroquinate dehydratase PMM0388 369054 - 369662 + | putative tRNA-(MS[2]IO[6]A)-hydroxylase TERM 277 369830 - 369812 - g 81 -4.6 -5.32565 | GAAGCAATTAAAAAA GCAAAACT TAT AGTTTTCC CAATTTCAAGTGATA TERM 278 369941 - 369955 + G 71 -8.6 -2.84812 | opp_overlap 369935, overlap 369935 AGACAAGAATTTGAT CCAGAT CAA ATCTGG TCTAGTGCTGTGGAT cobI/cbiL 369683 - 370438 + | precorrin-2 C20-methyltransferase PMM0390 370438 - 370920 + | hypothetical protein engA 370993 - 372369 + | GTP-binding protein EngA TERM 279 373177 - 373156 - g 88 -3.1 -6.34424 | overlap 373159 TTTCTAAAAAAAAAA TAACTATAA AAAC TTATAGATA TAAAGCTTTTGATAA TERM 280 373174 - 373159 - g 79 -4.8 -5.20756 | overlap 373156 CTAAAAAAAAAATAA CTATAA AAAC TTATAG ATATAAAGCTTTTGA PMM0392 372369 - 373283 + | cobalt ABC transporter permease PMM0393 373301 - 373567 + | hypothetical protein PMM0394 373571 - 374209 + | hypothetical protein TERM 281 374316 - 374327 + F 73 -4.4 -5.10029 | CATAAAAGATGGATA CCTT ACTA AAGG TTTTTTGGCCTTAGT PMM0395 374367 - 374942 + | hypothetical protein proC 374950 - 375756 + | Delta 1-pyrroline-5-carboxylate reductase PMM0397 376919 - 375753 - | putative glycosyl transferase, group 1 PMM0398 377784 - 377005 - | putative recombination protein O PMM0399 378444 - 377785 - | putative deoxyribose-phosphate aldolase lrtA 379037 - 378453 - | light repressed protein A-like protein TERM 282 379448 - 379416 - g 91 -7.4 -5.30575 | gap 1, opp_overlap 379420, overlap 379420 GAAAAATTGAAAAAA TAATTATTAAAACTC TAAG GAGTTTTAAT-ATTA ATTGCTCTACTAAAG TERM 283 379445 - 379420 - g 85 -10.7 -3.38677 | opp_overlap 379420, overlap 379416 AATTGAAAAAATAAT TATTAAAACTC TAAG GAGTTTTAATA TTAATTGCTCTACTA TERM 284 379420 - 379445 + G 85 -10.7 -3.43785 | opp_overlap 379420 379416 AATTGAAAAAATAAT TATTAAAACTC TAAG GAGTTTTAATA TTAATTGCTCTACTA lipB 379082 - 379726 + | putative lipoate-protein ligase B TERM 285 379938 - 379928 - g 70 -4 -5.10526 | opp_overlap 379928 AGAGGAAAAAATAAA GAAA AAA TTTC CTATTCTGAGTTAGC TERM 286 380642 - 380656 + G 84 -6.4 -5.16151 | CCTAGGCTATGGGAG GCCATT CAC GATGGC TTTTTCTTGGCTTTA fadD 379757 - 381682 + | putative long-chain-fatty-acid--CoA ligase PMM0403 381740 - 382186 + | hypothetical protein PMM0404 382612 - 382301 - | hypothetical protein TERM 287 383181 - 383166 - H 74 -6.2 -4.64861 | opp_overlap 383168 TTCTGGGAAAAGAAA TAGTGT GTAA ACACTA CATTGAATTGAAATC TERM 288 383255 - 383279 + H 82 -5.8 -5.52986 | gap 1, opp_overlap 383255, overlap 383259 TTTCTGATCACTAAA CACTCCGATTC TTAA GAATTGG-GTG TTTTTTTAATGCAAT TERM 289 383485 - 383448 - H 73 -7.1 -4.09685 | opp_overlap 383457, overlap 383449 383457 CTTGATTCGGTAAAA CCAGAAAAAGACCTCTA GAAA TAGGGGTCTTTTTTTGT GCAAATGATCTCTAA TERM 290 383484 - 383449 - H 85 -10.6 -3.05597 | opp_overlap 383457, overlap 383448 383457 TTGATTCGGTAAAAC CAGAAAAAGACCTCTA GAAA TAGGGGTCTTTTTTTG TGCAAATGATCTCTA TERM 291 383457 - 383476 + H 100 -8.6 -5.61596 | opp_overlap 383449 383448 383457 GTAAAACCAGAAAAA GACCTCTA GAAA TAGGGGTC TTTTTTTGTGCAAAT TERM 292 383476 - 383457 - H 80 -6.4 -5.09245 | opp_overlap 383457, overlap 383449 383448 GTAAAACCAGAAAAA GACCTCTA GAAA TAGGGGTC TTTTTTTGTGCAAAT pdhC 383670 - 385037 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 293 385099 - 385072 - g 85 -8 -4.36596 | gap 1, opp_overlap 385076, overlap 385074 385076 TTCATAATGAAGAAA TAGATCATAAGCT AGA AGCTTATGAT-TA TATTCTTGATGAAAC TERM 294 385098 - 385074 - g 79 -8.7 -3.78027 | opp_overlap 385076, overlap 385072 385076 CATAATGAAGAAATA GATCATAAGCT AGA AGCTTATGATT ATATTCTTGATGAAA TERM 295 385076 - 385096 + G 95 -11.3 -3.85505 | opp_overlap 385074 385072 385076 TAATGAAGAAATAGA TCATAAGCT AGA AGCTTATGA TTATATTCTTGATGA TERM 296 385096 - 385076 - g 90 -11.3 -3.45532 | opp_overlap 385076, overlap 385074 385072 TAATGAAGAAATAGA TCATAAGCT AGA AGCTTATGA TTATATTCTTGATGA TERM 297 385652 - 385628 - g 78 -9.3 -3.38316 | opp_overlap 385640 TGAGTATGCAAGTAA TCCTGGAGCAG TTG CTGCTCCAACA GCAGGATTACATTTA TERM 298 385717 - 385701 - g 100 -6.6 -6.40073 | opp_overlap 385700 AATTTAAAAAAAAAA GGCATA TTAGT TATGCC AATTACTTTGCATGT TERM 299 386123 - 386088 - g 100 -17.2 -5.25803 | opp_overlap 386086 386095 AATCTTTATAAAAAA GCCATAAGAGAAAAAT TTAG ATTCTTCTCTTATGGC GATGCTATGTATATT queA 385044 - 386168 + | queuosine biosynthesis protein cysK1 387157 - 386171 - | O-acetylserine (thiol)-lyase A TERM 300 387016 - 387041 + g 85 -9.1 -3.98484 | opp_overlap 387016 TCATGTTTGCACCAA TCCTGCATTTA ACAC TATATGCAGGA TTTCTACCTTCAATT TERM 301 387041 - 387016 - G 74 -9.1 -3.14564 | opp_overlap 387016 TCATGTTTGCACCAA TCCTGCATTTA ACAC TATATGCAGGA TTTCTACCTTCAATT PMM0408 388711 - 387242 - | putative cystathionine gamma-synthase TERM 302 388681 - 388691 + g 80 -5.4 -5.18357 | CCAACTCTAAACTTC TCCA TAT TGGA TTTTTTAGTAAATTC metB 389878 - 388715 - | putative cystathionine gamma-synthase TERM 303 389431 - 389464 + g 85 -8.3 -4.59251 | gap 1 AAAGAGGATTTGTTG GACTTTCGAGCCAGAT TAA AGTTGGCT-GAAAGTC TTTAATTTTTTTTAA TERM 304 389935 - 389896 - R 100 -11.1 -4.20868 | gap 1, opp_overlap 389897 389900 389905 389906, overlap 389900 TTTTCAAAATAAGAA TTAATTAAACCTCTCACC AACAA GGTGAGAGATTTAAT-AA TTTGAAGAAAAGGAT TERM 305 389897 - 389935 + r 91 -10.5 -3.53091 | opp_overlap 389896 389900, overlap 389900 389905 389906 TTTCAAAATAAGAAT TAATTAAACCTCTCACC AACAA GGTGAGAGATTTAATAA TTTGAAGAAAAGGAT TERM 306 389900 - 389932 + r 89 -12.2 -2.90496 | opp_overlap 389900 389896, overlap 389897 389905 389906 CAAAATAAGAATTAA TTAAACCTCTCACC AACAA GGTGAGAGATTTAA TAATTTGAAGAAAAG TERM 307 389932 - 389900 - R 100 -14.4 -3.67945 | opp_overlap 389897 389900 389905 389906, overlap 389896 CAAAATAAGAATTAA TTAAACCTCTCACC AACAA GGTGAGAGATTTAA TAATTTGAAGAAAAG TERM 308 389905 - 389927 + r 75 -7.7 -3.8901 | opp_overlap 389900 389896, overlap 389900 389897 389906 TAAGAATTAATTAAA CCTCTCACC AACAA GGTGAGAGA TTTAATAATTTGAAG TERM 309 389906 - 389926 + r 85 -11.2 -2.92924 | opp_overlap 389900 389896, overlap 389905 389900 389897 AAGAATTAATTAAAC CTCTCACC AACAA GGTGAGAG ATTTAATAATTTGAA rpsD 390561 - 389953 - | 30S ribosomal protein S4 PMM0411 390657 - 390893 + | hypothetical protein PMM0412 390898 - 391200 + | hypothetical protein TERM 310 391906 - 391893 - g 74 -3.9 -5.27938 | ATTTTCAAACAAAAA GAAAA TTAT TTTTC CCACCTTATTTAAAA murE 391211 - 392746 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase PMM0414 392828 - 393532 + | putative short chain dehydrogenase PMM0415 394696 - 393515 - | putative L-cysteine/cystine lyase PMM0416 395523 - 394729 - | hypothetical protein TERM 311 395558 - 395585 + H 100 -10 -5.16572 | opp_overlap 395565, overlap 395565 AATTAATATAGCCAA AAAAAAACCCCT ACTT AGGGGTTTTTTC TTTTTTGAATTAAAT TERM 312 395578 - 395565 - H 100 -8.1 -6.13 | opp_overlap 395558 395565 ATAGCCAAAAAAAAA CCCCT ACTT AGGGG TTTTTTCTTTTTTGA TERM 313 395565 - 395578 + H 100 -8.1 -6.04324 | opp_overlap 395565, overlap 395558 ATAGCCAAAAAAAAA CCCCT ACTT AGGGG TTTTTTCTTTTTTGA TERM 314 395709 - 395726 + H 100 -7.7 -5.45802 | opp_overlap 395709 TAGGTAAGTTCAACA GGTTGCT TTTT AGCAGCC TTTTTGTTTTGAACG TERM 315 395852 - 395865 + H 80 -6.7 -4.93365 | opp_overlap 395852 395851 GAAGGTGAACGAAAT GTAGC AATA GCTAC TTTTTAATTATAGAC PMM0417 396030 - 396290 + | hypothetical protein PMM0418 396557 - 396312 - | NifU-like protein TERM 316 396513 - 396493 - G 70 -6.2 -4.29106 | opp_overlap 396486 396485 396493 TCTGATATTAAGAAA GGTCTTAG TTCAT CTAAAACC GTTTCTACATTTTCA TERM 317 397010 - 397020 + G 70 -4 -5.00616 | opp_overlap 397017 397018, overlap 397019 TTTGTCACAGGGACT GAAA ATA TTTC TTTTTTAAAAAAAAG mqo 396629 - 398122 + | malate:quinone oxidoreductase TERM 318 398671 - 398642 - g 70 -8.1 -3.17891 | opp_overlap 398641 398642 AAGAAATTGAAGAGA TTATTGGATTAGA CACA TCTAATGCAATAA ATTGTTCTGCTAAAA TERM 319 398881 - 398861 - g 71 -7.7 -3.45941 | ATAAAAAGGACAAGA TCTTACTTA TGG CAAGTAAGA AAAACTATGAGTTAG lepA 398179 - 399987 + | GTP-binding protein LepA TERM 320 400166 - 400183 + G 71 -2.1 -5.39221 | gap 1, opp_overlap 400166 400167 400169, overlap 400166 400167 400169 GTATTAATTATGAAA G-TATTAG AGG CTAATAAC TTTTTTGGTTATTCT PMM0421 400070 - 400903 + | putative ABC transporter, oligopeptides PMM0422 401594 - 400923 - | tRNA/rRNA methyltransferase (SpoU) TERM 321 401078 - 401089 + g 74 -3 -5.38054 | opp_overlap 401078, overlap 401069 401072 CTCCTTTAAGAGGAA GTAA ACTC TTAC TTTTTCTTTGTCGAA TERM 322 401406 - 401420 + g 74 -5.8 -4.56791 | GCCTTGAGCTGTACT GTTAAA AGT TTTAAC TTTATCTTTTTCACT PMM0423 402171 - 402563 + | hypothetical protein PMM0424 402566 - 402802 + | hypothetical protein PMM0425 402934 - 404424 + | hypothetical protein TERM 323 404760 - 404739 - f 86 -3.9 -6.0458 | opp_overlap 404753, overlap 404754 ACAAATGAAAAAAAA TAAAAAAAA TAAA TTTTTTTCA AGAGAAAAAGTCCAT TERM 324 405820 - 405802 - g 93 -6.8 -5.35459 | ATAGATCAGAAAAAA GATTGAAA ATA CTTCAATC AAATTTGGAAAGATT PMM0426 404925 - 406238 + | Sun protein (Fmu protein) PMM0427 408021 - 406258 - | putative penicillin binding protein TERM 325 407775 - 407749 - G 82 -6.1 -5.03715 | gap 1, opp_overlap 407748 ATTATGGTTAAAAAA TCTTTTATCCTC ACCC GAG-ATAAAAGA ATACTTTAGAAAAAA chlG 408970 - 408023 - | bacteriochlorophyll/chlorophyll a synthase PMM0429 409210 - 408980 - | hypothetical protein TERM 326 410014 - 409996 - g 82 -6.1 -4.98061 | ATAGATGAAATAAAA TCTTTTC TTATT GAAAAGA AACTACCAATAAGAC hisF 409270 - 410037 + | imidazole glycerol phosphate synthase subunit HisF (cyclase) TERM 327 410678 - 410664 - g 72 -2.8 -5.47914 | overlap 410665 AAAAAGTATAAAAAA TTTTCC AAA GGGAAA CGAACTTATGCTAAT PMM0431 410074 - 410775 + | hypothetical protein PMM0432 411218 - 410784 - | hypothetical protein BirA 411342 - 412091 + | putative biotin--acetyl-CoA-carboxylase ligase PMM0434 412780 - 412094 - | ABC transporter ATP-binding protein ndhB 414315 - 412795 - | NAD(P)H-quinone oxidoreductase subunit 2 TERM 328 413154 - 413144 - G 76 -5.4 -5.00884 | overlap 413151 413153 ATTTTCCCGAAAAAA CCTA ACA TAGG CGGAAGCCCACCAAG TERM 329 413804 - 413790 - G 71 -5.6 -4.63044 | overlap 413793 ATCCATATAAATAAA CAGCAG CAG CAGCTG ATCCAACAAGTAGAT topA 414484 - 417096 + | DNA topoisomerase I PMM0437 417099 - 417683 + | hypothetical protein PMM0438 417706 - 418344 + | hypothetical protein PMM0439 418359 - 419516 + | hypothetical protein PMM0440 419517 - 420509 + | hypothetical protein PMM0441 421649 - 420504 - | aldo/keto reductase ribE 421761 - 422420 + | riboflavin synthase subunit alpha PMM0443 422779 - 422426 - | hypothetical protein ctaE 423479 - 422877 - | cytochrome c oxidase, subunit III TERM 330 423181 - 423195 + g 79 -3.6 -5.61881 | GTGACTAGCAACCAT TTTTGA GTA TCAGAA TTTTTATTTTTAAGA ctaD 425117 - 423492 - | cytochrome c oxidase, subunit I ctaC 425917 - 425114 - | putative cytochrome c oxidase, subunit 2 TERM 331 425214 - 425190 - G 83 -10.7 -3.11687 | opp_overlap 425186 TCAACTATTATTGAA GCCCTCATCCC CCC GTGATAAGGGC CACATAATTCCGCAC PMM0447 426170 - 427105 + | hypothetical protein ctaB 427102 - 428100 + | putative protoheme IX farnesyltransferase TERM 332 429002 - 429016 + G 86 -5.8 -5.49569 | overlap 428999 429013 AAGTAGAATTAGCTT TTTCAA AGT TTGAAA TTTTTTCTCTTGCTC PMM0449 428137 - 429153 + | putative multidrug efflux ABC transporter PMM0450 429207 - 430031 + | putative multidrug efflux ABC transporter TERM 333 430376 - 430362 - g 79 -5 -5.2189 | GGAATTATTAAAAAA TCTTCA ATA CGAAGA AAAGATAGAATTTAA PMM0451 430039 - 430551 + | hypothetical protein groEL 432301 - 430556 - | chaperonin GroEL fabG 433364 - 432615 - | 3-oxoacyl-[acyl-carrier protein] reductase ispD 433458 - 434129 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PMM0455 434998 - 434126 - | hypothetical protein ubiA 435898 - 435011 - | prenyltransferase TERM 334 436869 - 436849 - g 95 -9.1 -5.18866 | overlap 436840 CTGAAATAAAGAAAA TTCCTTCAC TCA GTGAAAGAA GATCGGAAATAATAA TERM 335 437026 - 437012 - g 77 -2.9 -5.66229 | AGGAATAATAAAAAA TGAAT TTAAT ATTCA AAGTAATATTAGGAA ppx 436020 - 437618 + | putative exopolyphosphatase PMM0458 438106 - 437615 - | hypothetical protein cobM 438919 - 438164 - | putative precorrin-4 C11-methyltransferase yvoC 439805 - 438912 - | prolipoprotein diacylglyceryl transferase TERM 336 438973 - 438963 - G 79 -2.6 -5.81032 | TAATCTTAAAAAAAA TAAT CCA ATTA ATCCAGAGGAAAATA petA 440770 - 439817 - | apocytochrome f TERM 337 440111 - 440129 + g 85 -9 -3.97947 | TTGATAACTACCATC TTCAATAG TTT CTATTGAA TTTATAGTGCCTGCA petC 441311 - 440775 - | cytochrome b6-f complex iron-sulfur subunit PMM0463 441435 - 441752 + | hypothetical protein PMM0464 442479 - 441721 - | Tat family protein secretion protein PMM0465 442823 - 442563 - | hypothetical protein PMM0466 444553 - 442853 - | secreted protein MPB70 precursor gmk 444628 - 445182 + | guanylate kinase psaJ 445334 - 445200 - | photosystem I reaction center subunit IX psaF 445919 - 445365 - | photosystem I PsaF protein (subunit III) PMM0470 445994 - 447064 + | o-sialoglycoprotein endopeptidase TERM 338 447160 - 447146 - g 76 -7.1 -4.21275 | TTAATTTATGGAAAA GAGGC TTTAC GCCTC AAGCAGAAATTTGGA hli20 447070 - 447252 + | high light inducible protein TERM 339 447293 - 447334 + F 86 -9.2 -4.11183 | opp_overlap 447303, overlap 447295 AATCTGCATAAGGGG TTTTTATTAATTAAATCT TTAATT AGATTTAATTAATAAATA TTGTTTATAGTGGAC TERM 340 447295 - 447332 + F 95 -11.8 -3.64882 | opp_overlap 447303, overlap 447293 TCTGCATAAGGGGTT TTTATTAATTAAATCT TTAATT AGATTTAATTAATAAA TATTGTTTATAGTGG PMM0472 447410 - 448609 + | CPA1 family Na+/H+ antiporter gltX 450046 - 448610 - | glutamyl-tRNA synthetase TERM 341 449692 - 449703 + g 100 -5.8 -6.60239 | overlap 449686 449685 TATTGTCGTGCTTGG GTGG CAAG CCAC TTTTTTTTTGTTTTT TERM 342 450021 - 450009 - G 80 -7.7 -4.23213 | CCTATATGTAATAAA CCAGT TGG ACTGG GCGCTAACCTTAAAT TERM 343 450087 - 450064 - R 70 -5.9 -4.30995 | TCCTTTAGAAAAGAA CGGGACCGA CGGGAT TCGAACCCG CAACTTCCGCCGTGA PMM0474 450481 - 450293 - | hypothetical protein rplS 451130 - 450648 - | 50S ribosomal protein L19 PMM0476 451453 - 451145 - | hypothetical protein map 451543 - 452382 + | methionine aminopeptidase PMM0478 453092 - 452379 - | short chain dehydrogenase TERM 344 452593 - 452603 + g 85 -2.6 -6.26417 | CCTAATATAATTTTT TTAA TTT TTAA TTTTTTTTTCTCATG PMM0479 453269 - 454378 + | BioD-like N-terminal domain of phosphotransacetylase PMM0480 454404 - 454916 + | hypothetical protein PMM0481 454984 - 455481 + | nucleotide-binding protein TERM 345 456075 - 456059 - g 88 -7.3 -4.96848 | CCTTTGATATAAAAA CTCAAGT TCA ACCTGAG AAATTTGAAACCTTA phb 455827 - 456633 + | Band 7 protein TERM 346 456662 - 456690 + T 93 -9.7 -4.47456 | opp_overlap 456662 TATGACGCTAAATGA TTGATCGAAGGCT TCT AGTGTTCGATCAA TTTCTTCTTCACTAT hemL 457939 - 456638 - | glutamate-1-semialdehyde aminotransferase TERM 347 457751 - 457735 - G 72 -7.3 -3.86015 | GAGCGTGTCCACAAA TAGCTGG ACC CCAACTA CCTATGTAATCAATA xthA 459012 - 458167 - | exodeoxyribonuclease III PMM0485 459085 - 459381 + | hypothetical protein PMM0486 459427 - 460026 + | hypothetical protein PMM0487 460093 - 461316 + | hypothetical protein TERM 348 462091 - 462119 + G 75 -8.2 -3.65722 | gap 1, opp_overlap 462093 CTATTGGATTAATAG TACCTGCTGCCCC AGGA GGGGTAG-GGGTA TTTGAGGCTTGTTTT PMM0488 461325 - 462269 + | hypothetical protein futB,hitB 463861 - 462266 - | putative iron ABC transporter PMM0490 464918 - 463824 - | hypothetical protein TERM 349 464275 - 464287 + gr 72 -4.9 -4.81359 | opp_overlap 464259, overlap 464263 464257 TGATCATGAGAATCT TGATT ACT AATCA TTTTCTCTTTAAATT phhB 465254 - 464964 - | pterin-4-alpha-carbinolamine dehydratase PMM0492 465746 - 465261 - | hypothetical protein TERM 350 466150 - 466131 - g 79 -5 -5.25976 | AAGTAAAAAAAGAAA CCTTGAAT TATT AATCAAGG AATTTAATAGGCAAA TERM 351 466182 - 466170 - g 85 -4.9 -5.52909 | TAATAGGCAAAAAAA TTTAG ATG CTAAA CTAGTTGAAGCACTT TERM 352 467017 - 466998 - g 80 -9.4 -3.48766 | overlap 466996 TCTAGAAGCGAAAGA TGTTCCAT CAGA ATGGAACA AAAGATATGAGGAAC cxp 465856 - 467361 + | carboxypeptidase Taq (M32) metallopeptidase ppa 467424 - 468011 + | putative inorganic pyrophosphatase hemC 468968 - 468018 - | porphobilinogen deaminase TERM 353 468077 - 468092 + g 70 -6.2 -4.1673 | CAGCCCCCTGAAGTT TTAGCT TTTC AGCTAA TTTCTTACCAACTTC TERM 354 468984 - 469019 + r 73 -8.7 -2.81186 | overlap 468981 TAAATATTGGTTTGA TTAGTTTAAGATAAA GTCGCA TTTATTTTAAACTAA TAGTTGCTAACTTTT sigA 470253 - 469063 - | RNA polymerase sigma factor RpoD priA 470582 - 472858 + | primosomal protein N' (replication factor Y) PMM0498 473965 - 472859 - | hypothetical protein TERM 355 473155 - 473137 - G 89 -9 -4.52589 | opp_overlap 473135 473137, overlap 473148 CTTCCCCATATAAAA GATTTTGA AGA TCAAAATC TATTCTGAAATTATA TERM 356 473137 - 473155 + g 77 -9 -3.25906 | opp_overlap 473137 473148, overlap 473135 CTTCCCCATATAAAA GATTTTGA AGA TCAAAATC TATTCTGAAATTATA argB 474822 - 473968 - | acetylglutamate kinase TERM 357 474688 - 474699 + g 70 -4.4 -4.80167 | TAGAGCAATATCTCT GAAG AAAG CTTC TTTTAATTTTTCATC PMM0500 475364 - 474834 - | hypothetical protein PMM0501 475395 - 475577 + | hypothetical protein PMM0502 476029 - 475580 - | hypothetical protein TERM 358 476381 - 476357 - g 76 -3.7 -5.49729 | gap 1, overlap 476365 AAGCATGTAAAAAAA TCAAAAAGCC TCTCTT GGCTTTT-GA GAGGAAATCGGAAAT TERM 359 476625 - 476604 - g 71 -3.1 -5.28176 | overlap 476618 CTCATGTATAAAAAA TTCAAACAT AGCA ATACTTGAA CCTAGTAAAAACAAA PMM0503 476059 - 476868 + | precorrin-6X reductase PMM0504 476865 - 477191 + | CutA1 divalent ion tolerance protein PMM0505 478187 - 477171 - | carbohydrate kinase TERM 360 478060 - 478072 + g 73 -7.7 -3.65996 | opp_overlap 478059, overlap 478059 ATAAGATTCATAGAT CCCTT TTT AAGGG TATTTATCTCTAAAA purA,adeK 479516 - 478206 - | adenylosuccinate synthetase psb27 480035 - 479598 - | putative photosystem II reaction center Psb27 protein proS 481864 - 480062 - | prolyl-tRNA synthetase TERM 361 480748 - 480730 - G 77 -7.5 -4.03085 | TCACAAAAATTGAAA GACTACT GGCGG AGTAGTC AGCGATTCTTATCCA TERM 362 482003 - 481989 - H 73 -5.8 -4.89477 | opp_overlap 481989 TCTGCAATAATAAAA CTTAAA ATT TTTAAG TAAATTCATTAACCT PMM0509 482041 - 482391 + | resolvase PMM0510 482478 - 482732 + | Reverse transcriptase (RNA-dependent ppa 482722 - 483270 + | inorganic pyrophosphatase TERM 363 483367 - 483349 - g 70 -6.2 -4.25256 | GCTTGATCAAAATAA TATTAATT ATC AATTAATA GATATCGTTAAAGAA PMM0512 483260 - 483628 + | putative arsenate reductase lepB 483658 - 484344 + | Signal peptidase I PMM0514 485560 - 484307 - | putative dihydroorotase cobC 486891 - 485563 - | putative alpha-ribazole-5'-P phosphatase PMM0516 487009 - 488367 + | membrane-associated protease PMM0517 488453 - 488884 + | hypothetical protein TERM 364 488989 - 489004 + G 80 -6.2 -4.76041 | GGACTATTTGGAAGG CTTGTA AATT TACAAG TTTTTAGTGCCTCTG TERM 365 489530 - 489508 - g 70 -6.2 -4.25458 | AATTTGATTAAGAAA GGAGGAGATG GAA CACCTCTCCC GGATAATTCGGGACC ftsI 488884 - 490635 + | peptidoglycan synthetase TERM 366 491323 - 491303 - g 75 -4.8 -5.04601 | gap 1 GGCATAAAGCAAAAA CTGGCAAAG ATAA CTTTGC-AG GGTGTGAAGATCCAG tal 490726 - 491727 + | transaldolase B PMM0520 492886 - 491753 - | NAD binding site TERM 367 492631 - 492621 - G 79 -6.8 -4.7078 | overlap 492622 CTAATTATCCAAAAA GGTG ATT CACC ACTAAGGTCGGCAAC frr 493431 - 492883 - | ribosome recycling factor pyrH 494164 - 493460 - | uridylate kinase cobO 494989 - 494294 - | cob(I)alamin adenosyltransferase PMM0524 496189 - 495020 - | phage integrase family protein TERM 368 495819 - 495839 + g 88 -6.9 -5.20333 | CTCCAAGTTGTTTTT CGAGTGCTT GTT AAGTATTCG TTTTTATTCTCCCTA hemH 496255 - 497430 + | ferrochelatase ilvH 497565 - 499328 + | acetolactate synthase 3 catalytic subunit PMM0527 499386 - 499739 + | hypothetical protein PMM0528 500528 - 499746 - | hypothetical protein TERM 369 500032 - 500046 + g 100 -5.8 -6.21477 | TTTTGAAGAGTTTTA TTATCT ATT AGATAA TTTTTTTTTGATATT PMM0529 501444 - 500539 - | hypothetical protein rps1b 502658 - 501441 - | 30S ribosomal protein S1 homolog B, putative Nbp1 PMM0531 502722 - 503519 + | creatininase PMM0532 503631 - 504347 + | hypothetical protein TERM 370 504738 - 504724 - g 79 -2.8 -5.78622 | overlap 504737 TTAGCTCAAAAAAAA GGTATT AAT ATTACC GCTTTGGGGGGGTTC PMM0533 504457 - 505497 + | hypothetical protein accA 505501 - 506508 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha PMM0535 506510 - 507217 + | short chain dehydrogenase folE 507372 - 508112 + | putative GTP cyclohydrolase I TERM 371 508107 - 508121 + T 90 -5.8 -5.85425 | opp_overlap 508107 508106 508109 TCTTCTAATAATAAT TACTAA AAA TTAGTA TTTTTTATTTCTTTA trpF 508771 - 508109 - | phosphoribosylanthranilate isomerase PMM0538 508827 - 510053 + | hypothetical protein PMM0539 510732 - 510061 - | protein ligase psaM 510866 - 510970 + | photosystem I reaction center subunit XII PMM0541 511060 - 511407 + | hypothetical protein por 511465 - 512469 + | protochlorophyllide oxidoreductase chlL 513361 - 512474 - | protochlorophyllide reductase iron-sulfur ATP-binding protein TERM 372 512912 - 512893 - G 79 -8.6 -3.92143 | CAAAACCTCCACAAA CGACGTCT CCCA AGACATCG AAAATAACTACATCG TERM 373 512947 - 512960 + g 71 -6.7 -4.00934 | opp_overlap 512946 CTTCTAGTAAATGAT GCTCT TTTA AGAGC TTTACTGTTTGGCCT chlB 515133 - 513553 - | light-independent protochlorophyllide reductase subunit B TERM 374 514628 - 514650 + g 81 -9.2 -3.81137 | overlap 514629 514643 GGACCTAATATATTT ACTTTAGGTC TTC GACCTAAAGA TTTCCATCTTTGAGG TERM 375 514629 - 514649 + g 100 -12.7 -2.882 | overlap 514628 514643 GACCTAATATATTTA CTTTAGGTC TTC GACCTAAAG ATTTCCATCTTTGAG TERM 376 514731 - 514744 + g 74 -3.1 -5.45813 | gap 1 TTTGATAAAAGGTTT CTGAGG CAC CC-CAG TTTTCTTTTTTGCTA chlN 516393 - 515137 - | light-independent protochlorophyllide reductase subunit N TERM 377 515628 - 515604 - G 71 -8.7 -2.83273 | opp_overlap 515605, overlap 515601 CTAAAGGAGCAATTA CTTCATGAACT TTT AGTTCATGAAT TTTAAAGGCAGCTGC TERM 378 515605 - 515627 + g 100 -12.2 -4.07885 | opp_overlap 515604 515601 TAAAGGAGCAATTAC TTCATGAACT TTT AGTTCATGAA TTTTAAAGGCAGCTG TERM 379 515954 - 515978 + g 70 -7.1 -3.65351 | AGAGCTTTCAATGCT CCATCTTCGCC TTG GGTAAAGGTGG TTTCGATCCCGCTGC PMM0546 516918 - 516550 - | hypothetical protein TERM 380 517390 - 517378 - g 78 -9.1 -3.5627 | opp_overlap 517378 AGATGATTGTGGAAA GAGCC TTT GGCTC TTTAGCTCTTTACCA TERM 381 517378 - 517390 + G 81 -9.1 -3.81137 | opp_overlap 517378 AGATGATTGTGGAAA GAGCC TTT GGCTC TTTAGCTCTTTACCA PMM0547 517017 - 517787 + | hypothetical protein PMM0548 518383 - 517796 - | HAM1 family protein csoS1 518725 - 519021 + | carboxysome shell protein CsoS1 TERM 382 519047 - 519031 - f 85 -8.1 -4.58308 | overlap 519042 GACTAATTAAATAAA GCAAAAT CTA ATTTTGC CAAAAAATAATTTCC TERM 383 519247 - 519216 - g 70 -7.2 -3.65812 | opp_overlap 519219 519221, overlap 519219 GGTGTCCCAAGAGAA GAAGTTGCAGCAGC GGTA GCGGCTGAATCTTC TACTGGTACTTGGTC TERM 384 519753 - 519741 - g 73 -7.7 -3.57561 | GCTGAAGCCGTTAAA CTTGC TCA GCAAG AAACTGGAGAAGTAA rbcL 519087 - 520502 + | ribulose bisophosphate carboxylase TERM 385 520518 - 520541 + F 74 -8.2 -3.34716 | opp_overlap 520519, overlap 520517 520519 520521 CTCAGATTTCAAACA AGAGGAGAAA ATCA TTTCTCCTCA ATTTTTCAAACCTCG TERM 386 520519 - 520540 + F 86 -11.7 -2.60508 | opp_overlap 520519, overlap 520518 520517 520521 TCAGATTTCAAACAA GAGGAGAAA ATCA TTTCTCCTC AATTTTTCAAACCTC TERM 387 520540 - 520519 - f 100 -11.7 -3.95378 | opp_overlap 520519 520518 520517 520521 TCAGATTTCAAACAA GAGGAGAAA ATCA TTTCTCCTC AATTTTTCAAACCTC rbcS 520592 - 520933 + | ribulose bisphosphate carboxylase, small chain TERM 388 520956 - 520993 + F 73 -2.8 -5.77853 | opp_overlap 520972 520975 TTTAACAGTCAATAT CTTTCTCCTTTCAAAA CTACAA TTTTTATTGGAGAAAG TTTTTTTTAAGAGTT csoS2 521024 - 523321 + | carboxysome shell protein CsoS2 csoS3 523329 - 524858 + | carboxysome shell protein CsoS3 PMM0554 524862 - 525128 + | putative carboxysome peptide A PMM0555 525161 - 525382 + | putative carboxysome peptide B PMM0556 525483 - 525722 + | hypothetical protein PMM0557 525955 - 525728 - | hypothetical protein PMM0558 526433 - 526041 - | hypothetical protein PMM0559 527198 - 526458 - | putative hydroxyacylglutathione hydrolase hisG 527242 - 527889 + | ATP phosphoribosyltransferase catalytic subunit TERM 389 529194 - 529212 + G 74 -3.8 -5.3104 | TTAGAAATATGCTTG GTGTCGTG CTG CAAGATAC TTTTATTTTTAGTGG PMM0561 527894 - 529690 + | putative multidrug efflux ABC transporter TERM 390 529824 - 529840 + G 70 -7.3 -3.73783 | opp_overlap 529824 ATTTGTTTGTAGCAA GGTCAAG GAA TTTGACC TTATTGAGTTAGATC PMM0562 529690 - 530220 + | putative acetyltransferase PMM0563 530905 - 530222 - | hypothetical protein PMM0564 531519 - 530911 - | hypothetical protein dnaA 531716 - 533107 + | chromosomal replication initiation protein PMM0566 534340 - 533102 - | glutathione S-transferase TERM 391 534015 - 534000 - G 82 -6.2 -5.02074 | opp_overlap 533985 534000 TCATTTTCTAAAAAA GTGATA ATGT TATCAC TTTCAGTTATTATCT TERM 392 534714 - 534704 - g 72 -2.6 -5.41746 | opp_overlap 534704 AATTCTTTAAAAAAA TTAA ACG TTAA AGTTTTTGAGGGCCT gshR 534377 - 535756 + | glutathione reductase (NADPH) PMM0568 536841 - 535762 - | CaCA family sodium/calcium exchanger TERM 393 537955 - 537945 - g 76 -5.4 -4.99043 | opp_overlap 537948 GTTGGACAAATAAAA CCAT TTC ATGG AGGTGAAACTTTAAC pyrC 536949 - 537998 + | dihydroorotase ndhL 538345 - 538578 + | NADH dehydrogenase subunit NdhL (ndhL) PMM0571 538582 - 538902 + | hypothetical protein trpA 538941 - 539780 + | tryptophan synthase subunit alpha TERM 394 539841 - 539825 - T 93 -8 -5.15634 | opp_overlap 539824 539825 TATTTTATTAAAAAA CCCCTT ATGAA AAGGGG CTTTAATTCTTATAA PMM0573 540154 - 539879 - | hypothetical protein TERM 395 540260 - 540245 - H 74 -4.8 -5.25906 | ATAAATTAATAAAAA GTTATT CTTA AATAAC ATAGCAATTAGTGAG PMM0574 540325 - 540597 + | YciI-like protein TERM 396 540752 - 540740 - T 79 -4.9 -5.45652 | ATTTTCAATAAAAAA TGTTT CTT AAACA CTATGTATATATGGT PMM0575 541134 - 540814 - | hypothetical protein PMM0576 541505 - 541131 - | hypothetical protein TERM 397 541404 - 541414 + g 70 -4 -5.02439 | AATAGTTCTACCAGC TCTT ATT AAGA TTTTTATAATTATAT PMM0577 542434 - 541511 - | type II alternative sigma-70 family RNA polymerase sigma factor TERM 398 542502 - 542535 + r 73 -6.5 -4.30104 | gap 1, opp_overlap 542498 542501 542505 542506 542509 542512 542516, overlap 542498 542495 542498 542506 TATACATGTAATAAT TAATTAATAATTAATT AAT AATTAATTATT-ATTA TTATTTATTAATTTG TERM 399 542506 - 542532 + r 95 -9.8 -4.22676 | opp_overlap 542498 542501 542506 542505 542509 542512 542516, overlap 542498 542495 542502 542498 CATGTAATAATTAAT TAATAATTAATT AAT AATTAATTATTA TTATTATTTATTAAT TERM 400 542532 - 542506 - R 79 -9.8 -2.72459 | opp_overlap 542498 542495 542502 542498 542506, overlap 542498 542501 542505 542509 542512 542516 CATGTAATAATTAAT TAATAATTAATT AAT AATTAATTATTA TTATTATTTATTAAT PMM0578 543246 - 542581 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 401 542783 - 542804 + g 74 -3.9 -5.24531 | gap 1, overlap 542780 GTATTACTACCTTTT GTTA-ACAAA TGA TTTGTATAAC TTTTTTCTAGAGGAT TERM 402 542888 - 542933 + g 80 -5.8 -5.08169 | gap 1, overlap 542890 GGACTTGTTTTCTTT GCTGTTTTATTCATTGAAATA CTATC TATTTCATTGAA-AAAACAAC TTTTTTCGCCTGTAT PMM0579 543310 - 543774 + | 6-pyruvoyl-tetrahydropterin synthase clpB1 546410 - 543828 - | ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB TERM 403 545742 - 545724 - G 70 -8.2 -3.09516 | opp_overlap 545717 545728, overlap 545728 TTGCCTATTATTTAA TGAAGATG GGA CATCTCCA TTAACGATTCGCTGA TERM 404 546402 - 546368 - G 100 -11.7 -5.54907 | gap 1, opp_overlap 546367 546366 TTGACAAAATAAAAA TGTCCCAAGCAGAATT GGAG AATTC-ACTTGGGACA AATTTCATTTAAACG petE 546827 - 546477 - | plastocyanin PMM0582 547869 - 546886 - | hypothetical protein hemE 548918 - 547878 - | uroporphyrinogen decarboxylase glgB 551306 - 549042 - | glycogen branching enzyme PMM0585 552938 - 551361 - | hypothetical protein TERM 405 552019 - 552046 + g 90 -8 -4.74539 | overlap 552023 TTTAATGAAAGATTC CAAATTTTTTTA TTCT TAAAAGAATTTG TTTTATTAACTTCTT TERM 406 552229 - 552245 + g 71 -2.3 -5.42259 | opp_overlap 552229 GGATCCCAAAGACCA CCAAT AATTAAC ATTGG TTTTTTTAGCCATGA PMM0586 553213 - 552947 - | hypothetical protein PMM0587 553675 - 553268 - | hypothetical protein TERM 407 553603 - 553621 + g 72 -4.7 -4.84527 | TAAAGTCATCTAGTT TCTTTTT AATTA AAAAAGA TTTTTCATGTCTGAA PMM0588 554127 - 553684 - | hypothetical protein TERM 408 554213 - 554202 - g 74 -3 -5.47399 | opp_overlap 554202 CTAACTTGAAAAAAA TTAG ATCT CTAA ATTTTAATAAAAAGC TERM 409 556253 - 556242 - g 87 -4.4 -5.88565 | opp_overlap 556242 556244 556248, overlap 556244 GCGATAATAAAAAAA GTTC TAGA GAAC AGTTTTCTTTAGATT TERM 410 556482 - 556499 + G 70 -4.2 -5.01042 | opp_overlap 556482 TAGATATTGGAGAAG TCGAAT ATGGTG ATTCGA TTTTTGATTTAGATT TERM 411 556845 - 556824 - g 85 -8.1 -4.36903 | opp_overlap 556800 556838, overlap 556801 556838 TTGATCAAATAGAAA TCAAAAGCT TTAA AGCTTCTGA TGATGCTTCTGGAAA PMM0589 554192 - 558136 + | hypothetical protein proA 558202 - 559512 + | gamma-glutamyl phosphate reductase folB 559522 - 559884 + | dihydroneopterin aldolase PMM0592 559890 - 560483 + | lipase family protein PMM0593 562563 - 560476 - | M3 family peptidase TERM 412 561013 - 560996 - G 76 -7.1 -4.254 | opp_overlap 560999 561003 GCAATATTTAATAAA GTGTTTT TGTG AAAACAC CAGTTTTCCATAAAT TERM 413 562179 - 562195 + g 74 -3.8 -5.20328 | overlap 562176 562188 CTAGAATTCTATTTT TGATTT CATCA AAATCA TTTGTTTTTTTAAGC TERM 414 562188 - 562199 + g 74 -3 -5.49809 | overlap 562176 562179 TATTTTTGATTTCAT CAAA ATCA TTTG TTTTTTTAAGCTTTA ndhD 564118 - 562568 - | NAD(P)H-quinone oxidoreductase subunit 4 TERM 415 564062 - 564048 - G 87 -8.6 -4.27467 | opp_overlap 564026 TTAGAACTTAAGAAA GGCATT ATT AATGCC CCAATTAAGGGTAAT thrB 565144 - 564197 - | homoserine kinase PMM0596 566189 - 565152 - | putative glucokinase thrS 568115 - 566199 - | threonyl-tRNA synthetase TERM 416 566510 - 566528 + g 73 -8.2 -3.49298 | overlap 566505 566503 566500 TTTGATAAGGTGCAA GCCAGATT GGG AATTTGGC TTCATATTGTTCTAT trpS 569135 - 568119 - | tryptophanyl-tRNA synthetase PMM0599 569580 - 569125 - | hypothetical protein TERM 417 570245 - 570255 + G 76 -5.4 -5.06052 | opp_overlap 570245 TGAAGTAATTTTAAA TAGC GAT GCTA TTTTGTATTTTTTAA PMM0600 569751 - 571076 + | hypothetical protein PMM0601 571112 - 572014 + | ABC transporter substrate-binding protein PMM0602 572019 - 572783 + | ABC transporter ATP-binding protein PMM0603 572795 - 573667 + | ABC transporter PMM0604 573674 - 574840 + | hypothetical protein PMM0605 575183 - 574845 - | hypothetical protein lepB 575813 - 575229 - | leader peptidase I TERM 418 575579 - 575595 + g 71 -2.3 -5.38497 | ATTGTTCTGGAACAT TAAAAAC AAT GATTTTA TTTTTTAATTTAGAT TERM 419 575774 - 575762 - G 79 -4.9 -5.30616 | opp_overlap 575762, overlap 575756 TTATCCAAATAAAAA GATTT TTA AAATC CTTTAGTATTGAACT TERM 420 576476 - 576457 - g 73 -8 -3.53811 | opp_overlap 576455 576451 TTGAGGTTTTTGAAA GGTTTTAT TTAA ATAAAACC TATAAATTTTTAAAA TERM 421 576786 - 576805 + G 79 -3.6 -5.52096 | TTTGGTCCCCTTTCC TCTTCTAA TTAT TTGGAGGA TTTTTTATTAAATTT menD 575865 - 577631 + | menaquinone biosynthesis protein; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase TERM 422 578252 - 578234 - g 71 -6.8 -4.02581 | GTGTAGAAAATATAA TTCTAAAG AAG CCTTAGAA ATGGGTTTGGTAAAT menB 577662 - 578519 + | naphthoate synthase TERM 423 578817 - 578830 + G 78 -6.7 -4.4078 | TACGTAATCTACCTA GTTGG ACAT CCAAC TTTTGATTCGGGCCA glgA 578565 - 580016 + | glycogen synthase TERM 424 580542 - 580566 + G 74 -8.7 -3.22906 | opp_overlap 580538, overlap 580541 TGGGGATGAGAGGCC TTGGGCAGATT GAA AATTTGTCCAA ATTTTCTGAACCTGA murF 580028 - 581398 + | cytoplasmic peptidoglycan synthetase glmU 582750 - 581401 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 425 582457 - 582474 + g 75 -2.7 -5.65513 | opp_overlap 582457 ATCTCCATTTAGAAC CATCAAG TTCC CTTCATG TTTTTTTACTTCCTG PMM0612 583723 - 582791 - | hypothetical protein aroA 585009 - 583693 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 426 583901 - 583911 + gH 74 -4 -5.16572 | opp_overlap 583901 TCCTTTTCTAAAATA TTTG CAC CAAA TTTTTTAAGTTGGGT TERM 427 584767 - 584791 + gH 88 -2.9 -6.4753 | opp_overlap 584771, overlap 584771 AAAATCATCTATACC TAAACCTTTGA TAG TAAAAGGTTGA TTTTTTTTTATTTCA TERM 428 585314 - 585301 - g 78 -2.3 -5.86965 | AGTTACTAAAAAAAA CCGCT AAAA AGTGG GATGGTAATAAAAGA TERM 429 585569 - 585537 - g 80 -9.4 -3.3771 | opp_overlap 585529 585545, overlap 585529 585535 585545 GCTGAAAGGATAATA TCCTTAAATAAGAA AAACG TTCTTATTTTAGGA AGTGGATGGGAAGGG PMM0614 585243 - 585866 + | 2-phosphosulfolactate phosphatase TERM 430 586416 - 586398 - g 88 -11.8 -2.91681 | opp_overlap 586392, overlap 586400 CCTGAACTTTATAGA CACCTTTC CTC GAAAGGTG CTGAACTTATAATGA TERM 431 586414 - 586400 - g 72 -8.6 -3.00994 | opp_overlap 586392, overlap 586398 TGAACTTTATAGACA CCTTTC CTC GAAAGG TGCTGAACTTATAAT PMM0615 585897 - 586724 + | putative nitrilase TERM 432 586824 - 586805 - g 76 -6.4 -4.63486 | opp_overlap 586805 ATTTTCCCAACAAAA GCATCTAG TGCA CTAGCTGC TTGGATTTTAAATTC PMM0616 586724 - 587812 + | cell wall hydrolase/autolysin murI 587809 - 588603 + | putative aspartate and glutamate racemase:glutamate racemase TERM 433 589157 - 589142 - g 70 -4 -5.08878 | AATATATAAATAAAA GCTATT GTAA AACAGC TTCTCTGATTGCAAA sds 588631 - 589602 + | polyprenyl synthetase; solanesyl diphosphate synthase (sds) acs 589700 - 591682 + | acetyl-coenzyme A synthetase PMM0620 592401 - 591679 - | hypothetical protein TERM 434 592980 - 592968 - g 78 -9.1 -3.55203 | AAAATGGTTTGGAAA GGGCA GAT TGCCC AAGCTCGAAAAAAAA dnaQ 592537 - 593349 + | putative DNA polymerase III, epsilon subunit PMM0622 593792 - 593379 - | hypothetical protein hisS 593891 - 595180 + | histidyl-tRNA synthetase TERM 435 595180 - 595205 + F 86 -2.7 -6.41881 | overlap 595183 AGATAAAAACCTTTA GAGTAATGAAA ATCA TTTTATTAGTC TTTTTTTTTATTATG TERM 436 595366 - 595356 - g 81 -4 -5.53991 | GATTTATCAAAAAAA GAAT CTA ATTC ATACTTAAAAAAAAG PMM0624 595185 - 595439 + | hypothetical protein PMM0625 595466 - 595768 + | hypothetical protein TERM 437 596059 - 596045 - g 100 -7.8 -5.93809 | opp_overlap 596045 596045 CTTGGACAAAAAAAA CCCTGG AAT CCAGAG GTTCTTTACAATTCA PMM0626 595904 - 596140 + | hypothetical protein TERM 438 596324 - 596340 + F 70 -4.5 -4.91459 | GTAATGCCCTTGTGA TTTCATT TCT AGTGAAA TTTTTCTAGATGTTC TERM 439 596466 - 596451 - f 70 -3.3 -5.39721 | TTATTACACAAAAAA TTGCT TATGTC AGCAA AAAAAGATTTATAAA pcb 596691 - 597749 + | light-harvesting complex protein TERM 440 597799 - 597771 - f 82 -10.4 -2.82942 | opp_overlap 597776 597798 597798, overlap 597776 GTCACTAATAAATAT TAAAAGGCCTCA ATTAA TGAGGCCTTTTT TATTTGATAAATTTT TERM 441 597776 - 597794 + F 100 -10.3 -5.68438 | opp_overlap 597776 597771 TAATAAATATTAAAA GGCCTCA ATTAA TGAGGCC TTTTTTATTTGATAA TERM 442 597794 - 597776 - f 100 -10.3 -4.55446 | opp_overlap 597776, overlap 597771 TAATAAATATTAAAA GGCCTCA ATTAA TGAGGCC TTTTTTATTTGATAA TERM 443 598512 - 598548 + G 71 -7.6 -3.42775 | gap 1, opp_overlap 598512 598513 598514, overlap 598511 598518 AACGGATAATGAAAA TC-CAAATCTGAAAATA GGCA TTTTTTCAGATTTGAGA ATTTTATTAATAAAT TERM 444 598548 - 598512 - g 82 -7.6 -4.50661 | gap 1, opp_overlap 598512 598511 598518, overlap 598513 598514 AACGGATAATGAAAA TC-CAAATCTGAAAATA GGCA TTTTTTCAGATTTGAGA ATTTTATTAATAAAT TERM 445 598546 - 598513 - g 77 -9.1 -3.29312 | opp_overlap 598512 598511 598518, overlap 598512 598514 ACGGATAATGAAAAT CCAAATCTGAAAATA GGCA TTTTTTCAGATTTGA GAATTTTATTAATAA TERM 446 598545 - 598514 - g 79 -10.4 -2.56864 | opp_overlap 598512 598511 598518, overlap 598513 598512 CGGATAATGAAAATC CAAATCTGAAAATA GGCA TTTTTTCAGATTTG AGAATTTTATTAATA PMM0628 597856 - 599229 + | sodium/solute symporter family protein PMM0629 599268 - 599525 + | hypothetical protein GSTTLp28,P28,GSTO1 600181 - 599522 - | glutathione S-transferase N terminus TERM 447 599641 - 599652 + g 86 -3 -6.17292 | TTTTTATAGGATCAT CAAA ATAA TTTG TTTTTTTTTGGCTTT TERM 448 599878 - 599898 + g 74 -4.1 -5.1502 | TAAAACTATGATCAT TTTCAGAAA TAA TTTCTAAAA TTTCTTTTTCTTTAT TERM 449 600565 - 600575 + G 77 -4 -5.37865 | GCATCTTTTTTATTA TTTG GAA CAAA TTTTTTAATTCTTAA PMM0631 600256 - 600798 + | NADH-ubiquinone/plastoquinone (comple PMM0632 601502 - 600795 - | short-chain dehydrogenase/reductase crtL2 602798 - 601515 - | putative lycopene epsilon cyclase TERM 450 603967 - 603957 - g 71 -5.4 -4.67552 | opp_overlap 603961 GCTAGTAAAAAAGAA CTTG CTT CAAG ACTTTGGAGTTTTAG por 603027 - 604028 + | putative light-dependent protochlorophyllide oxido-reductase PMM0635 605030 - 603999 - | small mechanosensitive ion channel TERM 451 604629 - 604613 - G 76 -7.3 -4.16307 | overlap 604611 TTTGTAAGAAAAATA TTGAACC TAT GGTCCAA GTAAAAGCCTTAATT PMM0636 605661 - 605104 - | isochorismatase hydrolase family protein fur 605813 - 606265 + | ferric uptake regulator family protein PMM0638 607204 - 606272 - | hypothetical protein stpA 608444 - 607233 - | putative glucosylglycerolphosphate phosphatase PMM0640 608596 - 610122 + | hypothetical protein PMM0641 610226 - 610885 + | hypothetical protein cysD 610958 - 612286 + | putative O-Acetyl homoserine sulfhydrylase TERM 452 613121 - 613141 + G 86 -9.7 -4.08767 | CTTCAAATACATCTT GGAGATCCC ATC GGAATCTCC TTTTCCAGCAATGGC metA 612301 - 613191 + | putative homoserine O-succinyltransferase PMM0644 614766 - 613198 - | putative sulfate transporter TERM 453 613761 - 613734 - G 74 -8.6 -3.31322 | TCCAAGGCTTTAGAA GGATGATCATTA ATAA TAATGATAATCC TGAAATTAAGGTTGA PMM0645 616075 - 614798 - | FAD linked oxidase, N-terminal TERM 454 617141 - 617121 - gH 87 -5.5 -5.67063 | overlap 617124 617133 TTTAGTAGAAAAAAA TAATGATGA ACA TCATCATAA ACATGGTGAGCACCA TERM 455 617138 - 617124 - gH 86 -7.2 -4.9041 | overlap 617121 617133 AGTAGAAAAAAATAA TGATGA ACA TCATCA TAAACATGGTGAGCA PMM0646 616042 - 617265 + | hypothetical protein PMM0647 617617 - 617874 + | hypothetical protein PMM0648 619507 - 617861 - | glucose-methanol-choline (GMC) oxidoreductase:NAD binding site TERM 456 618265 - 618246 - G 72 -8.6 -3.15354 | opp_overlap 618245 CATTTGAATTCAATA TGAGGGAT TGGA ATCCCCCA GCTATCTGTTCTCTT TERM 457 619753 - 619785 + G 71 -7.9 -3.52073 | opp_overlap 619762 AGGTGCAACTTTCTA TTTGACAGATTTACA GGA TGCAAATTTGTCAGA TTGTGATCTTCAAAA PMM0649 619616 - 620089 + | pentapeptide repeat-containing protein PMM0650 620507 - 620091 - | LEM domain-containing protein TERM 458 620301 - 620313 + gT 82 -7.7 -4.42235 | opp_overlap 620300 620301 TAATAAAATCAAATC GCTAC GCA GTAGC TTATTTTTCAGGATT PMM0651 620976 - 620479 - | VHS domain-containing protein PMM0652 621544 - 621167 - | 5'-3' exonuclease, C-terminal SAM fol TERM 459 621618 - 621589 - R 73 -5.7 -4.78157 | AGTAAAAACAAGAAA CCCTTCCAGAAAT TCCC ACTACCAGAAGGG TTATTAAATTGAATA gloA 622279 - 621890 - | lactoylglutathione lyase TERM 460 622450 - 622462 + G 76 -3.5 -5.42198 | opp_overlap 622450 GCCTTTTGGATACTA TTTAT TAT ATAAA TTTTCTTTTTTAAAA PMM0654 622370 - 622804 + | hypothetical protein PMM0655 623135 - 622839 - | hypothetical protein PMM0656 623617 - 623165 - | 7TM chemoreceptor TERM 461 624070 - 624056 - H 73 -2.2 -5.74684 | TAACAAAAACAAAAA TAAACA GTG TATTTA AAACCAAATAAGATC PMM0657 624356 - 624646 + | vanadium/alternative nitrogenase delt rsuA 624955 - 625677 + | putative pseudouridylate synthase specific to ribosomal small subunit TERM 462 625729 - 625706 - f 100 -10.4 -5.45652 | ATTTCCAATAAAAAA GTGCTTTTGG TTTT CCAAAAACAC AAGTTAAATTTGCTT TERM 463 626368 - 626382 + G 82 -8.6 -4.14392 | opp_overlap 626368 626367 ACATTCCCCTCAAAC TTCCTG TTT CAGGAA TTTTGCAAATTAGAG PMM0659 626013 - 626762 + | NAD-dependent DNA ligase N-terminus TERM 464 627751 - 627735 - T 100 -13.7 -5.28176 | opp_overlap 627735 TTGAGCCATAAAAAA GGCCACG TAA CGTGGCC TTTTTTTATTTTTGT TERM 465 627735 - 627751 + T 100 -13.7 -6.23317 | opp_overlap 627735 TTGAGCCATAAAAAA GGCCACG TAA CGTGGCC TTTTTTTATTTTTGT PMM0660 628646 - 628383 - | RNA recognition motif-containing protein TERM 466 628503 - 628482 - G 88 -8.9 -4.16842 | opp_overlap 628482, overlap 628463 TCTATTTTTAAGAAA TCTACATAT ATAA ATATGTAGA TTTTTTTCGTTTCTA TERM 467 628482 - 628503 + g 100 -8.9 -5.75822 | opp_overlap 628463 628482 TCTATTTTTAAGAAA TCTACATAT ATAA ATATGTAGA TTTTTTTCGTTTCTA nrdJ 631134 - 628726 - | ribonucleotide reductase (class II) TERM 468 629702 - 629712 + g 86 -3.2 -6.22691 | ACTGAAAGAGCTGCA GCTT TAA AGGC TTTTTTTTGTTCTTC TERM 469 630743 - 630757 + g 74 -4.2 -5.14163 | GTACAATTATATGCT CCTGAA AAA TTCTGG TTTTTATTAATCCAT TERM 470 630807 - 630793 - G 74 -8.6 -3.35679 | opp_overlap 630788 630787 630800 CCCTCCGATCCATAA CCATCT TCC AGATGG TTGAGCCTTTTGGTT TERM 471 630975 - 630986 + g 74 -5.8 -4.58663 | opp_overlap 630974 630975 AGAAGACAGGATAAG CAGC AGGA GCTG TTTTTGGGAAGTCAT PMM0662 631192 - 631887 + | hypothetical protein TERM 472 632322 - 632298 - g 73 -8 -3.49924 | GCTAAAGGATTAGAA CCTCAAACAA GAAAA TTATTTGAGG TATGCAGAATGAGAA TERM 473 633447 - 633422 - g 74 -7.6 -3.8901 | opp_overlap 633422, overlap 633445 TTGCAAAGTAGTAAA GGATTGCTGG AATAGG CCAGTAATCC TTTTTAAGAATCAGT TERM 474 633422 - 633447 + G 93 -9.8 -4.60041 | opp_overlap 633422 633445 TTGCAAAGTAGTAAA GGATTGCTGG AATAGG CCAGTAATCC TTTTTAAGAATCAGT prfC 631917 - 633554 + | peptide chain release factor 3 PMM0664 633606 - 634280 + | hypothetical protein hsp33 635184 - 634282 - | Hsp33 protein PMM0666 635821 - 635174 - | ABC transporter ATP-binding protein PMM0667 635907 - 636350 + | hypothetical protein PMM0668 636360 - 637133 + | hypothetical protein TERM 475 637716 - 637702 - g 74 -5.8 -4.66318 | opp_overlap 637704 ATTATCTCAACAAAA TATCAA TTT TTGATA GTTGCAATTTCTGGT PMM0669 637138 - 637881 + | hypothetical protein PMM0670 638543 - 637899 - | hypothetical protein PMM0671 640096 - 638594 - | putative phosphonate ABC transporter PMM0672 640838 - 640101 - | putative phosphonate ABC transporter TERM 476 640723 - 640738 + g 89 -7.6 -5.01732 | TTACCCGCGCCACTT TTGCCT AATA AGGCAA TTTTTTCACCCGATT PMM0673 641740 - 640835 - | phosphonate ABC transporter phosphonate-binding protein aspC 642922 - 641741 - | aminotransferase class-I PMM0675 643157 - 643660 + | Uracil-DNA glycosylase TERM 477 644068 - 644080 + G 72 -4.9 -4.85782 | opp_overlap 644068 TGATAAAGTAAGAAT TAATC CAG GATTA TTTGTTTTTGAGAAA ispG 643694 - 644911 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase PMM0677 645013 - 646302 + | carboxyl-terminal processing protease PMM0678 647213 - 646299 - | quinolinate synthetase TERM 478 647897 - 647907 + G 71 -5.4 -4.61231 | opp_overlap 647897 AAAAAAAAGAAAAAT TGAC CTT GTCA TTTTTGGACATATGC PMM0679 647295 - 648164 + | putative transcripton factor PMM0680 648970 - 648173 - | hypothetical protein PMM0681 649003 - 650193 + | hypothetical protein aroB 651281 - 650190 - | 3-dehydroquinate synthase TERM 479 651466 - 651450 - g 70 -3.8 -5.1104 | AAATATACAGAAAAA TTATTC AATAG GAATAA TTGGAGGTGGTCAAT purK 651412 - 652602 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 480 652800 - 652842 + F 100 -10.2 -4.63486 | gap 1 GGCGGGGATTCGGTG TTACCTATCAAACTGCATG CTAATA CATGCT-TTTGATAGGTAA TTTTATTCCCAGAAT PMM0684 652890 - 653243 + | hypothetical protein PMM0685 653377 - 653607 + | hypothetical protein PMM0686 654112 - 654294 + | hypothetical protein TERM 481 654579 - 654598 + T 100 -9.4 -5.60689 | opp_overlap 654579, overlap 654584 GTAAAACTATATAAA GATCTCTA GAAA TAGAGATC TTTTTTATTATCTAG TERM 482 654598 - 654579 - T 89 -9.4 -4.20797 | opp_overlap 654579 654584 GTAAAACTATATAAA GATCTCTA GAAA TAGAGATC TTTTTTATTATCTAG PMM0687 655672 - 655346 - | hypothetical protein PMM0688 656592 - 656275 - | elongation factor Tu domain-containing protein TERM 483 656972 - 656984 + r 70 -4.9 -4.82901 | opp_overlap 656970 656972 656974 656975 CTTTAAATACGAATA CATTT ATA AAATG TTTTTATAAGAAACC TERM 484 657427 - 657400 - R 100 -5.7 -6.47325 | opp_overlap 657400 AAAAAAGAAAAAAAA GATTGACTACT GACTTT AGTAATCAACC TCTTAACTTAGTTAT TERM 485 657998 - 658020 + r 100 -15 -4.08706 | CTAAATATTTTTACT GCTCTTGAGT CAA ACTCAAGAGC TTTATCTGATGACCA hli22 658889 - 658635 - | high light inducible protein TERM 486 658687 - 658669 - G 72 -2.4 -5.47821 | ATCCATCCAAAAAAA CCATAATT TAC AACTAAGG CCAATAAACCAACCA hli21 659028 - 658894 - | high light inducible protein PMM0691 659961 - 659755 - | hypothetical protein PMM0692 660397 - 660182 - | DDT domain-containing protein PMM0693 661104 - 660841 - | Hepatitis C virus envelope glycoprote PMM0694 661208 - 661873 + | short-chain dehydrogenase/reductase TERM 487 662155 - 662181 + T 84 -5.1 -5.72053 | AAATTAATATTAAAA GCTCTGTTTCT CTTGA AGTGACAGGGC TTTTTTATTTGCTTA TERM 488 662181 - 662209 + T 77 -6.9 -4.73297 | opp_overlap 662203, overlap 662203 CTTGAAGTGACAGGG CTTTTTTATTTGC TTA GTAAATTAAAAAG TTTATTTATTAATTC PMM0695 662914 - 662186 - | glutamine amidotransferase class-I TERM 489 662654 - 662666 + g 85 -2.7 -6.25242 | TCCTAAGCAAACTCC GATAA TTC TTGTC TTTTTTTTTAATTCT PMM0696 663435 - 663181 - | hypothetical protein PMM0697 663662 - 663435 - | D12 class N6 adenine-specific DNA met PMM0698 664191 - 663940 - | DnaJ domain-containing protein TERM 490 664119 - 664109 - G 70 -4 -5.08824 | opp_overlap 664109 GCTCTATTCAAAAAA GAAA CAG TTTC TTTGCGGCCATTGGC TERM 491 664142 - 664156 + g 73 -4.3 -5.05228 | CCATTGGCTTTATCT GCTTT GTTTA AAAGC TTTTTGTAATTTACT TERM 492 664283 - 664295 + H 72 -6.3 -4.53602 | opp_overlap 664283 TGAATATATATTTAA TCTCA ACA TGAGA TTTATTTAATATAAC TERM 493 664542 - 664500 - H 75 -6.4 -4.44355 | opp_overlap 664506 664508 664509 664534, overlap 664497 664508 664512 TAATTTTAAAAATAA TTAAATTATCAAGCAGCTCT ATA AGAACCGCTTGGTCTTTTAA GACTCTTTAATAAAC TERM 494 664959 - 664972 + H 73 -2.5 -5.67063 | opp_overlap 664956 664959 TCTAAAAAAAGATAT TTTTA TAAA TAAAA TTTTTTTCTAGTAAA PMM0699 665181 - 665417 + | hypothetical protein TERM 495 665645 - 665662 + G 74 -5.7 -4.71828 | opp_overlap 665645 TATTGTGAAATTGAA GATAAAA AACT TTTTATC TTTTATTCCTGAAGT PMM0700 665432 - 665674 + | hypothetical protein TERM 496 665820 - 665830 + T 71 -5.4 -4.57341 | CAAATTCAAACTCAT CCTT ACT AAGG TTTTTAAAAAGAATT PMM0701 666290 - 665979 - | LysM domain-containing protein PMM0702 666574 - 666960 + | hypothetical protein PMM0703 667306 - 667659 + | hypothetical protein TERM 497 667832 - 667842 + F 81 -5.4 -5.28481 | overlap 667825 GCCGATTGGTTGAGA TCAG CTT CTGA TTTTTTAATTGAGTC PMM0704 668058 - 669113 + | VIC family potassium channel protein phoB 669400 - 670128 + | two-component response regulator, phosphate phoR 670125 - 671273 + | two-component sensor histidine kinase, phosphate sensing PMM0707 671616 - 671290 - | lipoprotein TERM 498 671655 - 671681 + r 100 -11 -4.67692 | opp_overlap 671655 AGAAATTGATGAAAA GATACCACCT GTTTATA AGGTGGTATC TTTGTTTGATTTTAA TERM 499 671681 - 671655 - R 100 -11 -4.33767 | opp_overlap 671655 AGAAATTGATGAAAA GATACCACCT GTTTATA AGGTGGTATC TTTGTTTGATTTTAA PMM0708 673975 - 671693 - | putative secreted protein TERM 500 673762 - 673794 + g 93 -9.9 -4.50661 | ACATCAATGTCTTTC CATCTTCTGAGGCTG TAA CTACTTCAGAAGATG TTTTGGTTGTAGATT TERM 501 674114 - 674072 - R 90 -11.7 -3.03925 | gap 1, opp_overlap 674083, overlap 674083 TTTTAAAAATATAAG CA-AAAAAAAAAGACCTATC GCTA GATAGGTCTTTTTTTGTGTG TAAGATTTTCTAATT TERM 502 674083 - 674102 + r 100 -10.8 -5.76633 | opp_overlap 674072 674083 TAAGCAAAAAAAAAA GACCTATC GCTA GATAGGTC TTTTTTTGTGTGTAA TERM 503 674102 - 674083 - R 100 -10.8 -6.47228 | opp_overlap 674083, overlap 674072 TAAGCAAAAAAAAAA GACCTATC GCTA GATAGGTC TTTTTTTGTGTGTAA som 675495 - 674137 - | porin TERM 504 675476 - 675456 - G 74 -9.1 -3.01416 | opp_overlap 675456 675455 675459 675460, overlap 675459 CAGTACTCATAGATA TAACTGCAG GAA CTGCAATTA ATTTTTGAAATAATT TERM 505 675532 - 675519 - H 71 -5.3 -4.61633 | ACACACTTTTAAAAA TGGAT GTTA ATCCA AACTTTTTATAACTT PMM0710 675854 - 676825 + | ABC transporter, substrate binding protein, phosphate TERM 506 676851 - 676869 + T 100 -8.9 -5.60993 | opp_overlap 676851 ATATATTTACATAAA GGGAGAA ATTAA TTCTCCC TTTTTTTATGCAAAA TERM 507 676869 - 676851 - T 82 -8.9 -4.0827 | opp_overlap 676851 ATATATTTACATAAA GGGAGAA ATTAA TTCTCCC TTTTTTTATGCAAAA PMM0711 678101 - 676875 - | chromate transporter TERM 508 678111 - 678128 + r 75 -5.7 -4.93296 | opp_overlap 678110 TGCCATTTAAATACT CTAATTT CTAA AAATTAG TTTTTATGGTGATGA PMM0712 679391 - 678132 - | major facilitator superfamily multidrug-efflux transporter gap1 680425 - 679403 - | putative glyceraldehyde 3-phosphate dehydrogenase TERM 509 679515 - 679531 + g 70 -8.1 -3.11291 | opp_overlap 679507 679513 679510 679527 GAATTAACAACCATT GTTGATA AAC TATCAAC TATTGAACTTCTAGA TERM 510 680473 - 680452 - H 74 -8.9 -2.94144 | opp_overlap 680456, overlap 680449 TTTCTATTTAAATTA TACATCAAA ATAT TTTGATGTA TCAAGACCTTGTTGT PMM0714 680482 - 680862 + | ArsR family regulatory protein PMM0715 681244 - 681411 + | chorismate binding enzyme TERM 511 681415 - 681401 - T 73 -2.2 -5.64873 | overlap 681394 TTGAAGAAGAAAAAA TTACTT TAT AAATAA TTTTTTGGAAGACTT PMM0716 682366 - 681401 - | ACR3 family arsenite transporter PMM0717 682685 - 682455 - | hypothetical protein PMM0718 682867 - 683403 + | regulatory proteins, Crp fa PMM0719 683454 - 683759 + | hypothetical protein TERM 512 683864 - 683852 - T 70 -6.3 -4.20932 | AATAGGTACTCAAAA GGTTT CTG AAACC CAAGAAGCAGAGAGA PMM0720 684644 - 684390 - | Poly A polymerase regulatory subunit PMM0721 685013 - 685351 + | myosin N-terminal SH3-like domain-containing protein PMM0722 685602 - 685369 - | hypothetical protein pstC,phoW 685879 - 686826 + | putative phosphate ABC transporter pstA,phoT 686833 - 687726 + | putative phosphate ABC transporter TERM 513 688395 - 688412 + G 72 -8.5 -3.05384 | opp_overlap 688395 GAGTTAGTGATATGA CTGCATT CTTT AATGCAG TTGAATACGAAGAAG PMM0725 687728 - 688537 + | putative phosphate ABC transporter, ATP binding subunit PMM0726 689576 - 689268 - | hypothetical protein PMM0727 690441 - 689797 - | Serine/threonine specific protein phosphatase TERM 514 689929 - 689953 + g 80 -5.9 -5.04987 | opp_overlap 689936, overlap 689947 ATCCATTGCAAAACA TTTAAAGGATA ATT TATCTTTTGAA TTTTTTAAAAATGTT PMM0728 692919 - 690442 - | DEAD/DEAH box helicase domain-containing protein PMM0729 694556 - 692919 - | ATP-dependent DNA ligase PMM0730 695545 - 694553 - | hypothetical protein PMM0731 695992 - 695582 - | COMC family protein TERM 515 695695 - 695710 + g 82 -7.6 -4.6856 | CAAATGATATTTTTT CAGGTT GTGG AACCTG TTTTTGAACTATTTC TERM 516 696091 - 696114 + r 73 -3.4 -5.63012 | gap 1, overlap 696097 TTTAAGATTTCGATA TAAGTCTATTT GGG AAATA-ACTTA TTTTTGTTTCTTTTT PMM0732 696364 - 696077 - | major surface glycoprotein PMM0733 697776 - 696460 - | hypothetical protein TERM 517 697776 - 697793 + r 82 -2.1 -6.34424 | ATTTTATATCTTTCA TTTTTTA CTAA TAAAGAA TTTTTTTTTTGAAAA PMM0734 698285 - 697920 - | CopG family protein PMM0735 698520 - 698723 + | hypothetical protein TERM 518 699074 - 699063 - T 76 -3 -5.9362 | TAAAATATAAAAAAA TACA ATAT TGTA TAATAATTATTAATT PMM0736 700525 - 700175 - | alpha-2-macroglobulin family protein TERM 519 700220 - 700237 + g 71 -5.6 -4.56791 | overlap 700216 ACCTATTTTATCAGG GGTTGT TATTTT ACAACC TTTGTCTTTTTCCAT PMM0737 701269 - 700832 - | hypothetical protein PMM0738 701405 - 701674 + | hypothetical protein TERM 520 701715 - 701733 + T 78 -7.6 -4.33854 | opp_overlap 701709, overlap 701710 TACAGGAATTTCAAT TTTATTAC CTT GTAATAAA TTTAATTTTCTTAAT PMM0739 702211 - 701933 - | hypothetical protein TERM 521 702251 - 702269 + H 70 -3.2 -5.27335 | opp_overlap 702251, overlap 702255 TTGTATTTAATAGAA TTCATTTC TGA GAAATAAA TTTTTGTTTGAAAAG petN 702343 - 702447 + | cytochrome b6-f complex subunit PetN PMM0741 703256 - 702603 - | Thf1-like protein TERM 522 702906 - 702935 + g 90 -5.7 -5.55855 | overlap 702909 702911 TAAGGATTTATCTTT GTAGACTTCAAGA GTTT TCTTGGAGGCTTC TTTTATTTTTTTAGG TERM 523 702909 - 702932 + g 78 -6 -4.78984 | overlap 702906 702911 GGATTTATCTTTGTA GACTTCAAGA GTTT TCTTGGAGGC TTCTTTTATTTTTTT clpP1 703292 - 703882 + | ATP-dependent Clp protease proteolytic subunit ftsH1 705792 - 703879 - | FtsH ATP-dependent protease-like protein PMM0744 705905 - 706120 + | hypothetical protein PMM0745 707346 - 706117 - | insulinase family protein TERM 524 706390 - 706413 + g 73 -9 -2.86449 | opp_overlap 706389 706390 ATCCTTTTCGATAAT TGGAGAAGAT AATA ATTTTCTCCA TAATTCTGATAAGAT TERM 525 706765 - 706787 + g 72 -2.8 -5.36689 | opp_overlap 706766 706781, overlap 706766 706772 706781 TTTATTTTGGTCAAT ATTTTGGTTT AAT AAATCAAAAC TTTTATTTTTGATTT TERM 526 706812 - 706834 + g 76 -6.4 -4.6902 | opp_overlap 706811, overlap 706800 706795 TGATTTTTAAATTAT TAGAAATTAG ATA CTTATTTCTA TTTTTAAAATTCTCA PMM0746 708593 - 707343 - | Zn-dependent peptidase pcyA 708634 - 709359 + | phycocyanobilin:ferredoxin oxidoreductase PMM0748 709356 - 710273 + | ABC transporter PMM0749 710270 - 711445 + | ABC-transporter, membrane spanning component TERM 527 711746 - 711736 - g 76 -5.4 -5.07941 | AAAACTAGACAAAAA CTTC GAA GAAG TATAGGGATGATTTT PMM0750 711460 - 712182 + | ABC transporter, ATP-binding component PMM0751 712205 - 712354 + | hypothetical protein TERM 528 713130 - 713115 - g 71 -3.2 -5.26918 | opp_overlap 713115, overlap 713117 ATATTTTATAAAAAA CACTCA AATT TGAGAG TTAGATTTATGATTC PMM0752 712410 - 713327 + | glycosyl transferase family protein rpsB 713478 - 714182 + | 30S ribosomal protein S2 tsf 714227 - 714883 + | elongation factor Ts TERM 529 715589 - 715607 + G 74 -3.2 -5.49234 | opp_overlap 715589, overlap 715600 ATACTTTTGAATTTA TTGATAAA TCA TTTAGCAA TTTTTTGTTGAATCT PMM0755 714889 - 715962 + | adenylate cyclase TERM 530 717225 - 717202 - g 82 -9.8 -3.75437 | opp_overlap 717207, overlap 717207 AAGTACTTGATGAAA TTAAATCTGA TTTA TCAGATTTAA CACCTATGTCGAGAC TERM 531 718269 - 718282 + G 85 -8.1 -4.68724 | opp_overlap 718268 TTGGGATATAAGCAG TCGGG ATTA CCCGA TTTTGTATTGGATAA recG 715992 - 718448 + | ATP-dependent DNA helicase recG PMM0757 718507 - 719193 + | D-ala-D-ala dipeptidase sir 720987 - 719197 - | sulfite reductase subunit beta TERM 532 721758 - 721744 - g 88 -3.6 -6.08342 | GAAGAAAGAAAAAAA GAAATT GTT AATCTC ATAAATCAGGAATCT glyS 721075 - 723237 + | glycyl-tRNA synthetase beta subunit chlP 724558 - 723227 - | aromatic-ring hydroxylase (flavoprotein monooxygenase) PMM0761 724669 - 725400 + | putative carboxypeptidase TERM 533 725889 - 725879 - g 83 -6.8 -4.86033 | opp_overlap 725877 725879 AAAGCTTTAGAAAAA GGTC TTA GACC TATAGTTTTTGTAAA typA 725513 - 727315 + | tyrosine binding protein PMM0763 727322 - 727705 + | hypothetical protein PMM0764 727695 - 728423 + | ABC transporter ATP-binding protein TERM 534 729373 - 729384 + G 71 -2.2 -5.36965 | opp_overlap 729362 AGACCAGCATTACTT GCTA CTTC TGGC TTTTTTGTCGTATTA PMM0765 728536 - 729480 + | putative heme transporter rpe 730246 - 729491 - | ribulose-phosphate 3-epimerase TERM 535 730362 - 730395 + H 73 -7.7 -3.66658 | opp_overlap 730364 730365, overlap 730361 730364 730365 ACTAATAAGCAAATT AATTCTCATAAAAAA GGCA TTTTTTATGAGAGTA TGTTTTAAACCTCTT TERM 536 730364 - 730393 + H 90 -10.3 -3.40622 | opp_overlap 730364 730365, overlap 730362 730361 730365 TAATAAGCAAATTAA TTCTCATAAAAAA GGCA TTTTTTATGAGAG TATGTTTTAAACCTC TERM 537 730393 - 730364 - H 75 -8.1 -3.65261 | opp_overlap 730364 730362 730361 730365, overlap 730365 TAATAAGCAAATTAA TTCTCATAAAAAA GGCA TTTTTTATGAGAG TATGTTTTAAACCTC TERM 538 730365 - 730392 + H 86 -11.6 -2.63891 | opp_overlap 730365 730364, overlap 730364 730362 730361 AATAAGCAAATTAAT TCTCATAAAAAA GGCA TTTTTTATGAGA GTATGTTTTAAACCT TERM 539 730392 - 730365 - H 88 -11.6 -2.78072 | opp_overlap 730364 730362 730361 730365, overlap 730364 AATAAGCAAATTAAT TCTCATAAAAAA GGCA TTTTTTATGAGA GTATGTTTTAAACCT glpX 730434 - 731435 + | fructose 1,6-bisphosphatase II TERM 540 732354 - 732340 - g 74 -7.2 -3.99819 | opp_overlap 732338 732340 AAGAAATATATCAAA TGATGT TAA ACATCA TGCTTTTATAGAGTC hemA 731453 - 732754 + | glutamyl-tRNA reductase glgC 732893 - 734188 + | glucose-1-phosphate adenylyltransferase TERM 541 734254 - 734273 + F 70 -2.9 -5.56112 | overlap 734255 TTTCTCTAAGTTGCA TGCAATA TATATT TATTGCG TTTTTTAATTTTTAT gnd 734287 - 735705 + | 6-phosphogluconate dehydrogenase PMM0771 735693 - 736430 + | putative 6-phosphogluconolactonase (DevB, Pgl) PMM0772 736461 - 737009 + | hypothetical protein PMM0773 736999 - 737385 + | hypothetical protein ilvD 739082 - 737403 - | dihydroxy-acid dehydratase PMM0775 739396 - 739106 - | hypothetical protein PMM0776 740043 - 739426 - | putative uracil phosphoribosyltransferase PMM0777 740106 - 740618 + | hypothetical protein cobW 740628 - 741683 + | putative cobalamin synthesis protein TERM 542 742097 - 742081 - g 76 -7.3 -4.23615 | AGGAGAGGCAATAAA GTCTGCT TCC AGCAAAC TTGGAGTCGCAGGAA PMM0779 742007 - 742258 + | hypothetical protein purQ 742259 - 742924 + | phosphoribosylformylglycinamidine synthase TERM 543 742930 - 742948 + T 100 -11.8 -5.64421 | opp_overlap 742930, overlap 742900 TACACAATAAAAAAA GACCTCAA ATG TTGAGGTC TTTTTTATTTAGACT TERM 544 742948 - 742930 - T 100 -11.8 -5.9218 | opp_overlap 742900 742930 TACACAATAAAAAAA GACCTCAA ATG TTGAGGTC TTTTTTATTTAGACT cbbA,cfxA,fbaA,fda 744048 - 742975 - | fructose-1,6-bisphosphate aldolase PMM0782 745294 - 744191 - | putative oxidoreductase PMM0783 745683 - 745294 - | hypothetical protein accD 746566 - 745688 - | acetyl-CoA carboxylase subunit beta prk 747649 - 746750 - | phosphoribulokinase leuB 748812 - 747739 - | 3-isopropylmalate dehydrogenase lpxD 749875 - 748841 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 545 749093 - 749111 + g 74 -3.1 -5.36314 | TCCTGCTATTCCAAC TTGAGCA GCAAA TGCACAA TTTTTTCCTATTTTA proB 750972 - 749890 - | gamma-glutamyl kinase TERM 546 749926 - 749941 + g 75 -2.6 -5.58051 | CCTATGAACAACGAT CATTGA TGAA TTAATG TTTTCTTTTTTATTT PMM0789 751463 - 750969 - | hypothetical protein PMM0790 752004 - 751468 - | hypothetical protein PMM0791 752493 - 752038 - | hypothetical protein PMM0792 753545 - 752490 - | hypothetical protein TERM 547 753357 - 753379 + g 78 -5.8 -4.74706 | overlap 753370 ACATTTATGCTTAGT TTTTTTTAAG TTA TTTAAAAAAA TTTTTAAGTCTTCAA PMM0793 754706 - 753546 - | hypothetical protein TERM 548 754509 - 754492 - G 86 -5.7 -5.50499 | opp_overlap 754492 TTAGATTGAAAAAAA TCTAAAT CTAG ATTTAGA TTAGAAACCATAGTT PMM0794 755272 - 754730 - | hypothetical protein PMM0795 756909 - 755287 - | hypothetical protein TERM 549 756400 - 756384 - G 71 -6.7 -4.07687 | ATCTTCCCTTTAAAA TGAATTT GTA AAATTCA GGTGTTGAGTCAGAA hisA 757756 - 756989 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase PMM0797 757849 - 758769 + | putative mRNA binding protein pgsA 759285 - 758743 - | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase TERM 550 759250 - 759265 + g 88 -3.4 -5.95449 | ATTTGGAATATTTGC TATTAA TTTT TTAATA TTTTTTGTTTTGTTT TERM 551 759271 - 759289 + g 71 -3.2 -5.28176 | overlap 759273 TTTTTTAATATTTTT TGTTTTGT TTA GCAAAATA TTTTTTATAAATAAA TERM 552 760046 - 759997 - g 95 -10.5 -4.36411 | opp_overlap 759998 760000 760006, overlap 760000 760001 GATGAACTATCAAAA CAAGCTAAACATGATTATTTAAA TTCA TTTAAATAATCATGTTTAAGCTA TTTGTCTCGATTTAT TERM 553 759998 - 760046 + G 100 -13 -4.11897 | gap 1, opp_overlap 759997 760000 760001, overlap 760000 760006 ATGAACTATCAAAAC AAGC-TAAACATGATTATTTAAA TTCA TTTAAATAATCATGTTTAAGCTA TTTGTCTCGATTTAT TERM 554 760044 - 760000 - g 100 -15.6 -4.29049 | gap 1, opp_overlap 760000 759998 760006, overlap 759997 760001 GAACTATCAAAACAA GC-TAAACATGATTATTTAAA TTCA TTTAAATAATCATGTTTAAGC TATTTGTCTCGATTT TERM 555 760000 - 760044 + G 100 -15.6 -3.64364 | gap 1, opp_overlap 759997 760000 760001, overlap 759998 760006 GAACTATCAAAACAA GC-TAAACATGATTATTTAAA TTCA TTTAAATAATCATGTTTAAGC TATTTGTCTCGATTT TERM 556 760042 - 760001 - g 100 -15.7 -3.16345 | opp_overlap 760000 759998 760006, overlap 760000 759997 AACTATCAAAACAAG CTAAACATGATTATTTAAA TTCA TTTAAATAATCATGTTTAA GCTATTTGTCTCGAT TERM 557 760006 - 760037 + G 100 -13.4 -3.70571 | opp_overlap 760001 760000 759997, overlap 760000 759998 TCAAAACAAGCTAAA CATGATTATTTAAA TTCA TTTAAATAATCATG TTTAAGCTATTTGTC PMM0799 759421 - 760032 + | hypothetical protein PMM0800 760232 - 760044 - | hypothetical protein ycf39 760916 - 760257 - | putative NADH-flavin reductase PMM0802 761605 - 760952 - | putative endonuclease TERM 558 762466 - 762453 - g 95 -3.9 -6.10489 | opp_overlap 762453 AATCTCAAAAAAAAA GAAAA CTCT TTTTC ATGTTGTATAGGTGA futC 761703 - 762761 + | ABC transporter ATP-binding protein PMM0804 763008 - 763562 + | ferritin PMM0805 763838 - 763548 - | hypothetical protein PMM0806 764442 - 763846 - | Crp family regulatory proteins PMM0807 765572 - 764766 - | ABC transporter ATPase PMM0808 767001 - 765679 - | Rieske iron-sulfur protein 2Fe-2S subunit PMM0809 767367 - 767711 + | S1 RNA-binding domain-containing protein TERM 559 767795 - 767818 + T 74 -8.2 -3.39482 | overlap 767793 AGTCAAAAACGCCTT TTGCATCAAG ATTT CTTGAGGCAA TTATGAATAATATTG PMM0810 768618 - 768322 - | hypothetical protein PMM0811 769237 - 769620 + | hypothetical protein PMM0812 769737 - 770102 + | hypothetical protein TERM 560 770673 - 770691 + T 83 -6.2 -5.42862 | opp_overlap 770676 TAACTGATTTTTATC TAATTAAA GTT TTTAATTA TTTTTTTGGAAATAT PMM0813 771252 - 770971 - | hypothetical protein PMM0814 771708 - 771463 - | cytochrome oxidase c subunit VIb TERM 561 772045 - 772059 + r 71 -8.6 -3.03635 | TCAGCTTTTTCCGTT TGACAC TCA GTGTCA TCTTCAGGGCATTTA TERM 562 772764 - 772728 - R 70 -7.6 -3.43848 | gap 1, opp_overlap 772733, overlap 772733 AGAGACTTAACAATA TAAAAGCTTGCTTAATA TCCC TA-TAAGCAAGCTCTCA TGACGATTTAATTTT TERM 563 772759 - 772733 - R 86 -7.5 -4.79752 | gap 1, opp_overlap 772733, overlap 772728 CTTAACAATATAAAA GCTTGCTTAATA TCCC TA-TAAGCAAGC TCTCATGACGATTTA hli19 773193 - 773065 - | high light inducible protein hli18 773484 - 773224 - | high light inducible protein hli17 773693 - 773484 - | high light inducible protein hli16 773800 - 773693 - | high light inducible protein PMM0819 774755 - 774456 - | hypothetical protein PMM0820 775021 - 774815 - | EPSP synthase (3-phosphoshikimate 1-c TERM 564 776372 - 776388 + r 72 -7.9 -3.54029 | opp_overlap 776373, overlap 776373 TGCAAGCACAAAAAA ACCCGTC TAT GACGGGC TTCTCATTGGTGGCG TERM 565 776373 - 776387 + r 83 -11.4 -2.72096 | opp_overlap 776373, overlap 776372 GCAAGCACAAAAAAA CCCGTC TAT GACGGG CTTCTCATTGGTGGC TERM 566 776387 - 776373 - R 100 -11.4 -5.71983 | opp_overlap 776373 776372 GCAAGCACAAAAAAA CCCGTC TAT GACGGG CTTCTCATTGGTGGC PMM0821 777483 - 776518 - | L-asparaginase II K8K14.9 777979 - 777485 - | hypothetical protein PMM0823 778333 - 777989 - | domain of unknown function DUF143:Iojap-related protein PMM0824 778961 - 778323 - | hypothetical protein carB 779070 - 782369 + | carbamoyl-phosphate synthase, large subunit PMM0826 782627 - 782376 - | hypothetical protein TERM 567 782468 - 782480 + g 73 -7.7 -3.60538 | overlap 782466 CTTCATGCATTTTCA GCTGA GTT TCAGC TATTTGTAATCCTTT PMM0827 784444 - 782624 - | ABC transporter TERM 568 783179 - 783191 + gH 77 -7.7 -4.06781 | ATCTATATATATGTC CCCTA ATT TAGGG TTTATGAATTTTAAT TERM 569 784118 - 784134 + gH 71 -2.9 -5.15969 | opp_overlap 784117, overlap 784101 784119 GGCAATATAAACATC TTGCCCA TAT TGAGCAG TTTTTTGAATTAAAA PMM0828 784387 - 784563 + | S4 domain-containing protein TERM 570 784683 - 784697 + G 76 -8.6 -3.38991 | opp_overlap 784682 784690, overlap 784690 CACAAAAAAATATTT GGAAGA ATT TCTTCC TCTTATTGAAGAAAT tpiA 784615 - 785340 + | triosephosphate isomerase folP 785324 - 786166 + | putative dihydropteroate synthase chlH 790189 - 786182 - | magnesium chelatase TERM 571 790453 - 790429 - g 86 -2.9 -6.28967 | opp_overlap 790429 790432, overlap 790432 790434 TACAAATAAAAAAAA TAATGGTGAAA ACA TTTCACAATTG TTAAATCTTAAAAAA TERM 572 790450 - 790432 - g 73 -4.6 -5.11881 | opp_overlap 790432 790429, overlap 790429 790434 AAATAAAAAAAATAA TGGTGAAA ACA TTTCACAA TTGTTAAATCTTAAA TERM 573 790764 - 790748 - g 75 -8 -3.61398 | GTTCTTCTTCAACAA GCTGCT TCTGT AGCAGC AAAGTTTTACGATAA dapB 790292 - 791140 + | dihydrodipicolinate reductase TERM 574 791605 - 791583 - g 82 -7.8 -4.55287 | overlap 791586 GTTATTTAGATAAAA TTAGTTTTCC CAT GGAAAACAAA CATAGTCGAATTAGA TERM 575 791602 - 791586 - g 78 -9.5 -3.22496 | overlap 791583 ATTTAGATAAAATTA GTTTTCC CAT GGAAAAC AAACATAGTCGAATT PMM0833 791141 - 791785 + | hypothetical protein ubiH 791807 - 792961 + | 2-octaprenyl-6-methoxyphenol 4-monoxygenase UbiH PMM0835 792967 - 793161 + | hypothetical protein PMM0836 793199 - 793729 + | hypothetical protein PMM0837 793731 - 794351 + | hypothetical protein TERM 576 794375 - 794356 - f 72 -3.7 -5.31877 | opp_overlap 794356 AGTTACTATAAAAAA TAATTCT TATTTG AGAATTA TTTTTGATTTTTTAG TERM 577 794356 - 794375 + F 73 -4.4 -5.25735 | opp_overlap 794356 AGTTACTATAAAAAA TAATTCTT ATTT GAGAATTA TTTTTGATTTTTTAG PMM0838 794419 - 794787 + | nucleoside diphosphate kinase PMM0839 798530 - 795015 - | transcriptional-repair coupling factor PMM0840 798605 - 799315 + | hypothetical protein fmt 800298 - 799312 - | putative methionyl-tRNA formyltransferase TERM 578 799353 - 799377 + g 71 -2.9 -5.1925 | CAGGATTTAATTGTT GTATCAATTGA TTT TGACTTGATAC TTTTTTACCTTCTAG pmbA 801647 - 800295 - | putative modulator of DNA gyrase tldD 803074 - 801650 - | putative modulator of DNA gyrase; TldD TERM 579 803005 - 803017 + g 88 -6.3 -5.5074 | opp_overlap 803003 803005 TGCCATAGAAAATGA CTTCT TCA AGAAG TTTTTTATTACATTC PNIL34,AT103 804284 - 803112 - | magnesium-protoporphyrin IX monomethyl ester cyclase TERM 580 803800 - 803786 - G 100 -8.6 -5.33785 | AAGTAGCATAAAAAA TTGCTC TTG GAGCAA AATAAGTATAATCCT PMM0845 804919 - 804368 - | hypothetical protein PMM0846 805451 - 804996 - | hypothetical protein zam 807733 - 805514 - | putative acetazolamide conferring resistance protein Zam PMM0848 808106 - 807807 - | hypothetical protein PMM0849 808434 - 808108 - | hypothetical protein PMM0850 808778 - 808431 - | hypothetical protein PMM0851 808959 - 809708 + | putative CbbY-like protein PMM0852 809710 - 810036 + | hypothetical protein rpmF 810218 - 810042 - | 50S ribosomal protein L32 TERM 581 810136 - 810149 + g 77 -8.1 -3.84451 | opp_overlap 810144 GACATTGCTTTTTGA GCAGC TAAT GCTGC TTTACCTTTCCAAAC TERM 582 810386 - 810419 + G 72 -8.5 -3.17194 | gap 1 TTTCTCATATTCAGA TTCTAATAAGAG-TTA TTC TGATCTCTTATTAGAA TTAGATTCGGGGAAT ftsH4 810354 - 812108 + | cell division protein FtsH4 TERM 583 812859 - 812869 + G 79 -2.6 -5.80003 | GGTCACACCAATCTT TAAT GTT ATTA TTTTTTATTTATTAG PMM0855 812143 - 812916 + | hypothetical protein tpx 813527 - 812943 - | thioredoxin peroxidase TERM 584 813575 - 813554 - R 70 -4.5 -5.00616 | opp_overlap 813554 813572 CCTTTTTTGAAAAAA TTAAGGTCT TAAT ACACCTTAA ATTTATTATAATTTT PMM0857 814227 - 814009 - | hypothetical protein TERM 585 814885 - 814875 - H 73 -2.6 -5.72118 | opp_overlap 814875 AAAAAATATAAAAAA TAAT ATA ATTA GTTCTCAAAATAAAT PMM0858 815709 - 816077 + | hypothetical protein TERM 586 816497 - 816483 - f 81 -7.2 -4.88228 | opp_overlap 816483 ACCGAATACGAAAAA CCTAAA TTA TTTAGG TTTTGGAATTTTCTA TERM 587 816483 - 816497 + F 75 -7.2 -4.29656 | opp_overlap 816483 ACCGAATACGAAAAA CCTAAA TTA TTTAGG TTTTGGAATTTTCTA PMM0859 816587 - 816823 + | hypothetical protein TERM 588 817599 - 817614 + T 100 -9 -5.52023 | TTCATTCGACTGGAA GGGGTT TTAT AACCCC TTTTTTATTAGTAAT PMM0860 818726 - 818478 - | hypothetical protein PMM0861 819133 - 819372 + | virion host shutoff protein PMM0862 820810 - 820328 - | SpoU family tRNA/rRNA methyltransferase cobU/cobP 821362 - 820814 - | putative cobinamide kinase PMM0864 821686 - 821372 - | fusion glycoprotein F0 PMM0865 821798 - 822424 + | hypothetical protein PMM0866 822909 - 822421 - | SMC domain-containing protein metG 824575 - 823040 - | methionyl-tRNA synthetase TERM 589 824520 - 824505 - G 70 -6.2 -4.17789 | GAATCACAAATCAAA GTAGTA TATA TACTAC CCAAATGAGGTTTAT PMM0868 825819 - 824635 - | ribonuclease II rpsR 826080 - 825859 - | 30S ribosomal protein S18 rpmG 826283 - 826089 - | 50S ribosomal protein L33 pheT 826385 - 828850 + | phenylalanyl-tRNA synthetase beta chain TERM 590 829192 - 829176 - g 76 -7.3 -4.21922 | GCATCGAAAAGGAAA CAGCTCT TCA AAAGCTG CAAATAAAGTAGTAC PMM0872 828956 - 829204 + | carboxylesterase TERM 591 829564 - 829577 + T 73 -5.3 -4.87803 | TATTAAATCTTTTAA GTCTT ATTT AAGAC TTTTATTTAGACCTG PMM0873 830634 - 829621 - | DnaJ domain-containing protein PMM0874 831788 - 830958 - | putative ATP adenylyltransferase TERM 592 831836 - 831848 + r 73 -3.5 -5.5074 | opp_overlap 831836 TTTAAAAAACATAAT TAATT TGG AATTA TTTTTTATTAAATTG PMM0875 832238 - 831846 - | hypothetical protein TERM 593 832568 - 832540 - g 93 -9.9 -4.4634 | opp_overlap 832538 832536 832540 AACTTCAAGAAGAAA TTATAGATTATCT TGA AAATAATCTATAA TCTATTATCTATAAT PMM0876 832347 - 832568 + | hypothetical protein metH 836169 - 832609 - | putative methionine synthase TERM 594 833472 - 833482 + g 72 -2.6 -5.34381 | ATTGAATACTTTTGG TTTT TTC AAAA TTTTTATTTAAATTT ilvE 837108 - 836194 - | branched-chain amino acid aminotransferase TERM 595 836620 - 836646 + g 72 -8.8 -3.04144 | opp_overlap 836619, overlap 836626 836627 836640 TTTGGCTAATGAACT GGTAATGTAAGC ACC GCTTATCTTACC TCTTAAAGGTAGAGA TERM 596 837089 - 837109 + g 76 -5.5 -5.08255 | CCTTCAAACCAGGCA TATGGAAGA AAT TCTTGCATA TTTTATTTTAGAAAT CobN 837180 - 840917 + | cobalamin biosynthetic protein CobN PMM0880 841566 - 840919 - | hypothetical protein PMM0881 842158 - 841559 - | hypothetical protein uvrC 844184 - 842214 - | excinuclease ABC subunit C PMM0883 844682 - 844194 - | hypothetical protein TERM 597 844644 - 844654 + g 90 -4 -5.95166 | TCCATGTGGAATTTT TCTT AAT AAGA TTTTTTTTGCTTCAA coaD 844742 - 845221 + | putative pantetheine-phosphate adenylyltransferase dacB 846189 - 845218 - | D-Ala-D-Ala carboxypeptidase 3 PMM0886 847097 - 846450 - | hypothetical protein TERM 598 846887 - 846907 + g 82 -2.7 -5.97979 | opp_overlap 846887 CTGGATCAGAATAAG TAATAAAAA CAT TTTTTTTTA TTTTTTTATTATTAT nifS 848269 - 847097 - | class-V aminotransferase family cysteine desulfurase dapF 849130 - 848270 - | diaminopimelate epimerase TERM 599 849027 - 849043 + g 71 -3.1 -5.30686 | TTTTTTATATCGATT TTTTTAT CAG ATAGAAA TTTTTTGTAAATATT TERM 600 850180 - 850169 - g 95 -4.4 -6.21477 | AAGATCAAAAAAAAA TTGG TATT CCAA CAAATTTAATAGCTA leuS 849238 - 851814 + | leucyl-tRNA synthetase TERM 601 851811 - 851824 + T 79 -3.9 -5.71638 | TATAAATATTGTCGT TTAGT ATTA ACTAA TTTTTTTAATTCTTA pgi 853397 - 851817 - | glucose-6-phosphate isomerase TERM 602 852847 - 852863 + g 82 -10.9 -2.60075 | overlap 852846 ATTGCTATTTTTGGT TCAGGTG TTC CACCTGA CTTACTTACAACAAC purN 853580 - 854236 + | phosphoribosylglycinamide formyltransferase argC 855275 - 854220 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 603 855089 - 855100 + g 71 -3 -5.16572 | CTTTATCGGCGATTC TATC TATT GATA TTTTTTCAATTAAAT ribA/ribB 855364 - 857097 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein PMM0894 857531 - 857094 - | cyclophilin-type peptidyl-prolyl cis-trans isomerase PMM0895 857960 - 857568 - | hypothetical protein TERM 604 857712 - 857724 + g 72 -4.9 -4.83169 | TCTATCCTCTGCTGT TTTTG GCA CAAAA TTTTTCTCAACCAAT dnaJ2 858936 - 857995 - | DnaJ2 protein dnaK 860917 - 858920 - | molecular chaperone DnaK, heat shock protein hsp70 TERM 605 861301 - 861289 - g 76 -6.3 -4.63184 | opp_overlap 861276, overlap 861276 AAGTTACTTGAAAAA GACTT TTA AAGTC ACTATTACGAATAAA petF 861281 - 861655 + | ferredoxin, petF-like protein TERM 606 862129 - 862117 - g 72 -2.7 -5.37345 | overlap 862118 TGCAACGATAAAAAA CTGAT GGT ATCAA ATGCTAATTCTCTTA PMM0899 861661 - 862509 + | myo-inositol-1(or 4)-monophosphatase hisZ 862531 - 863682 + | ATP phosphoribosyltransferase regulatory subunit TERM 607 864474 - 864461 - g 74 -3.1 -5.3321 | AATTAATAAGAAAAA TCCTC CATG GAGAA AACAACCTAGTGAAC htpG 863832 - 865736 + | heat shock protein 90 rpmB 865776 - 866012 + | 50S ribosomal protein L28 TERM 608 866431 - 866448 + G 72 -2.7 -5.37593 | overlap 866432 TTCCTGGATTCCTCC TTATTCC GATA GGAATAC TTTTTTGATTTCACC PMM0903 866018 - 866551 + | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergens family protein PMM0904 866557 - 866859 + | hypothetical protein PMM0905 866852 - 867187 + | hypothetical protein psaK 867252 - 867515 + | photosystem I PsaK protein (subunit X) Dxs 869431 - 867518 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 609 868731 - 868711 - G 76 -6.1 -4.58283 | CAAGTTCTTCAAAAA CTGCTCCAA CTT TTGGTACAG CTAAACGTCTAACAC ilvA 869548 - 871089 + | threonine dehydratase PMM0909 871171 - 871653 + | hypothetical protein PMM0910 871685 - 871963 + | hypothetical protein PMM0911 872296 - 871967 - | hypothetical protein TERM 610 873142 - 873158 + G 71 -8.1 -3.33696 | opp_overlap 873139 CAGCAGAAGAAGTCC CTCTTTT ACA AAAAGAG TTAATTAGAAAAGCA TERM 611 873606 - 873616 + G 74 -6.8 -4.24342 | TTGCAATTAGTATGG GGAG TGA CTCC TTTATTAGTCAAGAA pykF 872358 - 874148 + | pyruvate kinase PMM0913 874141 - 875370 + | putative ABC transporter PMM0914 875385 - 875957 + | hypothetical protein PMM0915 875954 - 876415 + | putative lipoprotein signal peptidase TERM 612 877144 - 877134 - g 72 -2.6 -5.3658 | ATCAGAAAAACAAAA TAAT TTT ATTA GAGAAAACATTATCT PMM0916 876418 - 877920 + | hypothetical protein PMM0917 879432 - 878050 - | pyridoxal-dependent decarboxylase family protein TERM 613 878829 - 878839 + g 72 -2.6 -5.40072 | TATCTGTTTTGACTT TAAT TAA ATTA TTTTTTTCAAGACCC PMM0918 879496 - 879993 + | putative cytidine/deoxycytidylate deaminase spt 881152 - 879968 - | serine:pyruvate/alanine:glyoxylate aminotransferase glnA 881367 - 882788 + | glutamine synthetase, glutamate--ammonia ligase TERM 614 882821 - 882857 + F 93 -2.4 -6.59152 | opp_overlap 882821, overlap 882825 AAAAATTTTAAAAGA TCTTTTTGAGATTTAT CACAA ATAATTCTCAAATTGA TTTTTTTTTTGTTGG TERM 615 882825 - 882853 + F 70 -6.2 -4.25793 | opp_overlap 882821, overlap 882821 ATTTTAAAAGATCTT TTTGAGATTTAT CACAA ATAATTCTCAAA TTGATTTTTTTTTTG TERM 616 883198 - 883180 - g 70 -4.6 -4.74706 | CCCAATATCCAAAAA TTTGGC TGGATAT GCCAAA CACATGGGACCGAAG PMM0921 882897 - 883952 + | methyltransferase PMM0922 883973 - 884227 + | hypothetical protein PMM0923 884659 - 884216 - | anti-sigma regulatory factor (Ser/Thr protein kinase) PMM0924 885443 - 884709 - | hypothetical protein TERM 617 886370 - 886360 - g 70 -4 -4.96773 | TCAATTAAAAATAAA GATT GGA AATC GGTTTGTAAGTCTGT PMM0925 885463 - 886515 + | tRNA 2-selenouridine synthase psb28 886571 - 886924 + | photosystem II reaction center protein Psb28 PMM0927 886939 - 887982 + | hypothetical protein secF 889105 - 888188 - | preprotein translocase subunit SecF secD 890591 - 889131 - | preprotein translocase subunit SecD TERM 618 890213 - 890226 + g 88 -6.7 -5.26875 | opp_overlap 890212 CATTAATTTTAAATC TCTGC AATT GCAGA TTTTTTAATTGAGAA pdhB 891578 - 890595 - | pyruvate dehydrogenase E1 beta subunit PMM0931 892079 - 891762 - | hypothetical protein ispE 893039 - 892101 - | putative 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (CMK) TERM 619 892619 - 892606 - G 74 -2.3 -5.60993 | CCTTCTATAAAAAAA GGTAC ATCT GAACC AAGTTTTGCCGAAAG ksgA 893874 - 893041 - | dimethyladenosine transferase TERM 620 893559 - 893570 + g 91 -4.4 -6.08342 | ATGGGATATTTGCGA TCAC TTTT GTGA TTTTTTTATTTATTG PMM0934 893891 - 894244 + | hypothetical protein PMM0935 894265 - 894678 + | hypothetical protein PMM0936 894799 - 895185 + | putative SOS mutagenesis protein UmuD TERM 621 896192 - 896138 - g 86 -9.6 -4.11869 | opp_overlap 896150, overlap 896143 896145 896150 896152 TAAAAAACTTATAAA TGCAACAGATAATACAAGTACTATTT TAA AAACAGTACTTGCATTATCTAAAGAA ATTTATACTCCGGAA TERM 622 896187 - 896143 - g 100 -16.9 -3.34113 | opp_overlap 896150, overlap 896138 896145 896150 896152 AACTTATAAATGCAA CAGATAATACAAGTACTATTT TAA AAACAGTACTTGCATTATCTA AAGAAATTTATACTC TERM 623 896185 - 896145 - g 100 -17.3 -3.23047 | opp_overlap 896150, overlap 896143 896138 896150 896152 CTTATAAATGCAACA GATAATACAAGTACTATTT TAA AAACAGTACTTGCATTATC TAAAGAAATTTATAC TERM 624 896180 - 896150 - g 93 -11.4 -3.71156 | opp_overlap 896150, overlap 896145 896143 896138 896152 AAATGCAACAGATAA TACAAGTACTATTT TAA AAACAGTACTTGCA TTATCTAAAGAAATT TERM 625 896178 - 896152 - g 91 -11.8 -3.42364 | opp_overlap 896150, overlap 896150 896145 896143 896138 ATGCAACAGATAATA CAAGTACTATTT TAA AAACAGTACTTG CATTATCTAAAGAAA TERM 626 896402 - 896391 - g 78 -2.2 -5.71983 | GCAATTACAAAAAAA CCAC AAGA ATGG GCAATGAATAGAAAT umuC 895182 - 896474 + | putative UmuC protein PMM0938 896484 - 896939 + | Serine hydroxymethyltransferase dnaG 898989 - 896953 - | DNA primase TERM 627 897180 - 897191 + g 70 -4.4 -4.85267 | opp_overlap 897180 CCCAGGATTCAATAA GATG TCTA CATC TTTTTAATGATTTAT PMM0940 899088 - 899975 + | integral membrane protein, DUF6 TERM 628 899993 - 900004 + G 71 -3 -5.29445 | TTAAAAAAAAGTATG TTTC TAAT GAAA TTTTTCTTATTAGCA PMM0941 899990 - 900349 + | cAMP phosphodiesterase class-II TERM 629 900547 - 900579 + G 76 -6.3 -4.68209 | opp_overlap 900569, overlap 900548 AGAAGATTCTGATAT GCTCTTTGGTTTTAG CAC CAAGGACCAAAGAGA TTTCTTTATTCAAAT TERM 630 900548 - 900578 + G 80 -9.8 -3.39841 | opp_overlap 900569, overlap 900547 GAAGATTCTGATATG CTCTTTGGTTTTAG CAC CAAGGACCAAAGAG ATTTCTTTATTCAAA ruvA 900350 - 901009 + | putative holliday junction DNA helicase RuvA rpsO 901061 - 901330 + | 30S ribosomal protein S15 TERM 631 901382 - 901369 - g 81 -3.9 -5.63236 | overlap 901363 AGCTAAAAAGAAAAA TCTTT CAAA AAAGA AAAAAATATCTGAGG PMM0944 901340 - 901786 + | hypothetical protein TERM 632 901814 - 901783 - T 73 -5.4 -4.91109 | gap 1, overlap 901803 CTTTGATGAGAAAAA GTAAATTATGCAATC ATA GATTTCA-AATTTAC TTGAAAAGACTTATC dnaE 905285 - 901788 - | DNA polymerase III subunit alpha gatA 906818 - 905364 - | glutamyl-tRNA(Gln) amidotransferase A subunit PMM0947 907093 - 906851 - | hypothetical protein PMM0948 908483 - 907197 - | tRNA/rRNA methyltransferase TERM 633 907931 - 907952 + g 81 -4.5 -5.46629 | AGTCTTCATAATTTC TTTCATTTG GACT CAATTGAAA TTTTTTTGAACTGTT PMM0949 908888 - 908496 - | hypothetical protein rsbV 909277 - 908885 - | anti-anti-sigma regulatory factor RsbV TERM 634 909000 - 909010 + g 74 -4 -5.1848 | opp_overlap 909000 CCAACTACAGAAAAC CTTA GTT TAAG TTTTTTGCATTCCTT carA 910459 - 909317 - | carbamoyl phosphate synthase small subunit trpD/G 911503 - 910472 - | anthranilate phosphoribosyltransferase PMM0953 911829 - 911533 - | hypothetical protein TERM 635 913487 - 913504 + G 70 -7.1 -3.58726 | opp_overlap 913487 913485 AAAAGTAAAACCATA TTGATGA TTAG TCATCAA TTATCTGTGGCAGCA PMM0954 911909 - 913654 + | multidrug ABC transporter msrA 913686 - 914414 + | peptide methionine sulfoxide reductase TERM 636 914450 - 914440 - T 73 -5.4 -4.81551 | TATTTATAGTAAAAA TACG GGG CGTA GCGCAGCTTGGTAGC PMM0956 915536 - 914736 - | bacitracin resistance protein BacA TERM 637 915265 - 915254 - G 71 -3 -5.16841 | overlap 915244 TTACACCAATAAAAA CAAT TGGA ATTG TACCTATAAAGATAG PMM0957 915626 - 915904 + | GRAM domain-containing protein PMM0958 916514 - 916287 - | hypothetical protein PMM0959 917549 - 916593 - | putative kinase PMM0960 918349 - 917546 - | mannosyl-3-phosphoglycerate phosphatase PMM0961 920110 - 918353 - | glycoside hydrolase family protein PMM0962 920161 - 921387 + | hypothetical protein ureC 923093 - 921384 - | urease subunit alpha TERM 638 922243 - 922265 + g 74 -9.1 -3.1247 | opp_overlap 922241 ATTTTAATAATATCT GGAGCATGG CCACC CCCTGCTCC TTCGGTATGAAAAGT TERM 639 922410 - 922424 + g 77 -10 -2.53634 | overlap 922408 TGAATTTATCGTTGA TGGGGT TGT ACCCCA GTCTTCATGTAATTT TERM 640 922584 - 922568 - G 71 -8 -3.24089 | overlap 922567 GAGATATATGAAAAG CACCTG GAGTG CAGGTG GTAGCATTTGTTCCG ureB 923419 - 923099 - | urease subunit beta ureA 923724 - 923422 - | urease subunit gamma ureD 924678 - 923785 - | urease accessory protein UreD TERM 641 923964 - 923978 + g 87 -4.4 -5.80951 | opp_overlap 923934 AATTATTATTTTCTT TAAAAA TTA TTTTTA TTTTTTCTTTTAAGT TERM 642 923989 - 923999 + g 74 -4 -5.18726 | TTTTATTTTTTCTTT TAAG TAA CTTA TTTTTGTTATGGGAA TERM 643 924960 - 924933 - g 90 -4.2 -6.0458 | overlap 924924 ACAAATCAAAAAAAA CTCTTTGTACAA ATCA TTGCGCAAAAAG AAAATTTAATAAAAA ureE 924726 - 925190 + | urease accessory protein UreE ureF 925168 - 925854 + | urease accessory protein UreF ureG 925858 - 926463 + | urease accessory protein UreG TERM 644 927832 - 927816 - g 73 -8.1 -3.3903 | opp_overlap 927813 CAAGCATGGAACCAA TTTGAAC CTA GTTCAAA AGGTTATGCATGTGA urtA 926568 - 927887 + | putative urea ABC transporter, substrate binding protein TERM 645 927938 - 927908 - f 100 -14.1 -3.5764 | opp_overlap 927910 927913, overlap 927910 927913 AAGCTTACTTCTAAA GAGAAGAGGAGGC TTAAT GCCTCCTCTTCTT ATATCCACTTAAATT TERM 646 927910 - 927936 + F 100 -16.7 -3.52192 | opp_overlap 927908 927910 927913, overlap 927913 GCTTACTTCTAAAGA GAAGAGGAGGC TTAAT GCCTCCTCTTC TTATATCCACTTAAA TERM 647 927936 - 927910 - f 100 -16.7 -3.36515 | opp_overlap 927910 927913, overlap 927908 927913 GCTTACTTCTAAAGA GAAGAGGAGGC TTAAT GCCTCCTCTTC TTATATCCACTTAAA TERM 648 927913 - 927933 + F 100 -12.6 -3.89348 | opp_overlap 927910 927908 927913, overlap 927910 TACTTCTAAAGAGAA GAGGAGGC TTAAT GCCTCCTC TTCTTATATCCACTT TERM 649 927933 - 927913 - f 95 -12.6 -3.82202 | opp_overlap 927913 927910, overlap 927910 927908 TACTTCTAAAGAGAA GAGGAGGC TTAAT GCCTCCTC TTCTTATATCCACTT TERM 650 928178 - 928190 + G 79 -4.9 -5.25805 | overlap 928164 TTACAACGCTTACGT TATAG TTT CTATA TTTTTTGCATTTATT urtB 927969 - 929123 + | putative urea ABC transporter urtC 929123 - 930259 + | putative membrane protein of urea ABC transport system urtD 930252 - 931007 + | putative ATP binding subunit of urea ABC transport system urtE 931010 - 931720 + | putative ATP-binding subunit of urea ABC transport system TERM 651 932981 - 932966 - f 70 -3.4 -5.34365 | overlap 932957 TCACAATAATAAAAA TATTAT AGGT ATAATA ACTTATAAATGACAA PMM0975 932990 - 933385 + | hypothetical protein TERM 652 933725 - 933737 + G 71 -9.1 -2.57211 | opp_overlap 933733, overlap 933714 933724 GGTCGGTTGTCGGTT GCAGG TAA CCTGC CTTATAAAAGAAGGT PMM0976 933470 - 934459 + | putative multidrug efflux ABC transporter PMM0977 934460 - 935251 + | putative multidrug efflux ABC transporter PMM0978 935248 - 936042 + | membrane protein, multidrug efflux associated PMM0979 936336 - 936046 - | hypothetical protein PMM0980 936539 - 936312 - | hypothetical protein TERM 653 936811 - 936828 + r 100 -11.3 -6.38039 | ATTCCCCATCACCTG GCCTCAC AATT GTGAGGC TTTTTTTTTTACGTA PMM0981 937840 - 937028 - | hypothetical protein TERM 654 937273 - 937263 - G 77 -4 -5.44119 | CCTACTGTAAAAAAA GTTA AAC TAAC AGCTCTAAGAAAATC PMM0982 937978 - 938319 + | HNH endonuclease:HNH nuclease PMM0983 939011 - 938610 - | ATP synthase protein 8 TERM 655 938846 - 938856 + g 71 -5.4 -4.7033 | TCATGGCTTCATCCT TGGA CAA TCCA TTTTGTATTGCATTA TERM 656 940122 - 940107 - g 75 -4.8 -5.12617 | GAATGATTTAAAAAA TAATGA TTTC TCATTA GATCAACCTCCAAAA TERM 657 940331 - 940312 - g 76 -3.6 -5.50499 | GGAGATTCAAAAAAA TTTGCGAT GGAA ATCGAAAA TCTACATAAATATCA PMM0984 939892 - 940395 + | josephin PMM0985 940658 - 941053 + | putative purine phosphoribosyltransferase related protein PMM0986 941050 - 941514 + | hypothetical protein rpsU 941604 - 941780 + | 30S ribosomal protein S21 TERM 658 941894 - 941913 + T 79 -2.2 -5.99154 | TCAATAGTCAATCTT TATAAACA TTAA TGTTAATA TTTTTTTATTTAATA PMM0988 942251 - 941919 - | helix-hairpin-helix DNA-binding motif-containing protein PMM0989 942772 - 943377 + | ATP/GTP-binding motif-containing protein PMM0990 944524 - 943361 - | hypothetical protein TERM 659 943791 - 943814 + g 73 -8.4 -3.43774 | opp_overlap 943785, overlap 943785 TACCTAAATCTATTC TTATAGTTAT CTTT ATAACTATAA TTGGATTTTGTATAA TERM 660 944522 - 944534 + g 72 -4.9 -4.80077 | opp_overlap 944522 AAAAGTATCATTAAT CATAA TTA TTATG TTGTTTTTATTTTCA PMM0991 945357 - 944530 - | amphipathic helix repeat-containing protein PMM0992 945804 - 946208 + | hypothetical protein PMM0993 946911 - 946213 - | hypothetical protein TERM 661 946402 - 946416 + g 72 -5 -4.78107 | AATTATTTTTTTAAC GAAAGG TTC TCTTTC TTTTTCCTCATCATA PMM0994 946932 - 947393 + | GCN5-related N-acetyltransferase TERM 662 947525 - 947542 + G 74 -7.1 -4.00066 | TATTTTCTATATTTA TTACCTT CGCA AAGGTAA TTTATCCATTATCAA PMM0995 947410 - 947727 + | hypothetical protein PMM0996 948065 - 948382 + | hypothetical protein PMM0997 949064 - 948798 - | hypothetical protein TERM 663 949137 - 949123 - H 95 -5.7 -6.10489 | opp_overlap 949123 AACGCTAAAAAAAAA GACTC AAAAA GAGTC TTTTAAAATTAAAAT TERM 664 949288 - 949276 - H 73 -6.9 -4.3534 | overlap 949277 GCCCAAGGATTAAAA CCGCC AAT GGCGA ATGAAGCTAAAAAAT TERM 665 949287 - 949277 - H 72 -8.2 -3.20722 | overlap 949276 CCCAAGGATTAAAAC CGCC AAT GGCG AATGAAGCTAAAAAA TERM 666 949675 - 949663 - g 70 -6.3 -4.20834 | opp_overlap 949666 CCCAAAATAATTAAA TCTCT TTT AGAGA AAGGTTATGACATCG PMM0998 949471 - 949908 + | hypothetical protein PMM0999 950017 - 950202 + | hypothetical protein PMM1000 950246 - 950551 + | hypothetical protein TERM 667 950941 - 950930 - g 71 -3 -5.16472 | AAAAAGTTTAAAAAA GATA TTGA TATC ATCTGCTCCAATAGT PMM1001 950696 - 951412 + | hypothetical protein TERM 668 951490 - 951478 - f 77 -4.9 -5.34632 | AATAAAATAGAAAAA GATAA GGG TTATC TAAAATTTATTCATT pepN 951919 - 954528 + | aminopeptidase N TERM 669 954852 - 954834 - f 75 -5.4 -5.06505 | opp_overlap 954834 AACCATATATAAAAA TTTCTCTT AAG AAGAAAAA TATTAAAGATTATTT PMM1003 954934 - 955131 + | photosystem II reaction centre N prot TERM 670 955151 - 955128 - T 83 -7 -5.05116 | opp_overlap 955128 TCAGAAAGAAGAAAA TTAATTATTT CTAT AAATAATTAA TTATGTAGCCTTGGA purT 956620 - 955448 - | phosphoribosylglycinamide formyltransferase 2 TERM 671 956481 - 956495 + g 74 -6.4 -4.53036 | GAATTATCAGCTAAT TGCATC GCA GGTGCA TTTTCGTATTTATCA PMM1005 956880 - 956638 - | lectin subunit alpha PMM1006 956998 - 957510 + | glutathione peroxidase PMM1007 958299 - 957628 - | hypothetical protein PMM1008 958740 - 958348 - | hypothetical protein PMM1009 958893 - 959915 + | nitrogen regulation protein NifR3 family protein PMM1010 959934 - 960188 + | hypothetical protein PMM1011 960676 - 960431 - | hypothetical protein TERM 672 960716 - 960728 + H 70 -3.5 -5.29716 | opp_overlap 960716, overlap 960721 TCTTACAAAAATAAA TTTTT GAA AAAAA TTTTTCTTATATTAA PMM1012 961124 - 961537 + | 4-hydroxybenzoyl-CoA thioesterase family protein TERM 673 962063 - 962050 - g 77 -3.9 -5.38249 | ATTAATTACAAAAAA TGATT TTAT AATCA GAAAAACAAAATCTT PMM1013 961832 - 962083 + | hypothetical protein TERM 674 962189 - 962164 - g 74 -6.3 -4.39889 | opp_overlap 962164 ATAACTATATTAAAA TCTTTTCTATT AAAA AAAAGAAAAGA TAAATTAAATGATGC PMM1014 962101 - 962973 + | hypothetical protein PMM1015 963383 - 962979 - | hypothetical protein PMM1016 963752 - 964045 + | virion host shutoff protein PMM1017 964595 - 964053 - | hypothetical protein PMM1018 964673 - 964957 + | hypothetical protein TERM 675 965027 - 965010 - T 78 -4.3 -5.56112 | opp_overlap 965010 ACAAAAATTAAAAAA TTAATTT TCGC AAATTAA GTATTTATTACTAGT PMM1018a 965487 - 965317 - | hypothetical protein PMM1019 966105 - 965803 - | integrin alpha cytoplasmic region PMM1020 966656 - 966838 + | hypothetical protein PMM1021 966927 - 967682 + | pili assembly chaperone TERM 676 967793 - 967807 + G 76 -7.2 -4.22338 | GGAATAAATGAGTTA TGTTCA GAG TGAACA TTTTAAAATTATGCT PMM1022 967785 - 968132 + | hypothetical protein PMM1023 969422 - 969673 + | lactate/malate dehydrogenase, alpha/b PMM1024 969677 - 969946 + | hypothetical protein PMM1025 969954 - 970361 + | putative stress-induced protein OsmC PMM1026 971672 - 971277 - | hypothetical protein TERM 677 972053 - 972039 - g 72 -7.2 -3.7798 | GAGAAAAATGAAAGA GTTGAA AAT TTCAAC AAATTATTAAATCAA PMM1027 971799 - 972089 + | inward rectifier potassium channel TERM 678 972109 - 972094 - f 100 -8.2 -5.68438 | opp_overlap 972094 GCAGCAAATAAAAAA GACCCC TAAA GGGGCC TAAATTGGTTCTAAT TERM 679 972282 - 972259 - f 93 -9 -4.78661 | opp_overlap 972259, overlap 972253 AGCTAAAAACCAAAA GTACTCAAAT TATT ATTCGAGTAC TTATTACTATCAGAA PMM1028 972906 - 973154 + | hypothetical protein PMM1029 974191 - 973403 - | ABC transporter PMM1030 974248 - 974643 + | ferric uptake regulator family protein PMM1031 975428 - 974679 - | ABC transporter ATP-binding protein PMM1032 975567 - 976988 + | ABC transporter substrate-binding protein TERM 680 978215 - 978233 + G 73 -8.2 -3.37493 | opp_overlap 978215 ACTTGGATGGGAAGA CTTCTTTC CGA GAAAGGAG TTGATATATTCAGAA PMM1033 977075 - 978433 + | cobalamin synthesis protein/P47K TERM 681 978634 - 978655 + G 74 -5.9 -4.62471 | GGTCTTCTTGCAATG TCTATCCAT CCGA ATGGAGAGA TTTTTGCAACTTCAG PMM1034 978421 - 979494 + | WD-40 repeat-containing G-protein TERM 682 980211 - 980180 - Tf 81 -7.4 -4.85618 | opp_overlap 980186, overlap 980185 980186 AAATAAGTAAGAAAA TAAAAGGAGAGCTT TTAA AAGCTCTCTTTTTT ATTTGGGCTAAAAAA TERM 683 980206 - 980185 - Tf 90 -7.3 -5.28831 | opp_overlap 980186, overlap 980180 980186 AGTAAGAAAATAAAA GGAGAGCTT TTAA AAGCTCTCT TTTTTATTTGGGCTA TERM 684 980186 - 980205 + TF 100 -10.8 -5.64421 | opp_overlap 980185 980180 980186 GTAAGAAAATAAAAG GAGAGCTT TTAA AAGCTCTC TTTTTTATTTGGGCT TERM 685 980205 - 980186 - Tf 91 -10.8 -3.74859 | opp_overlap 980186, overlap 980185 980180 GTAAGAAAATAAAAG GAGAGCTT TTAA AAGCTCTC TTTTTTATTTGGGCT PMM1036 981120 - 980848 - | hypothetical protein PMM1035 980573 - 980899 + | DNA gyrase/topoisomerase IV, subunit PMM1037 981347 - 981111 - | hypothetical protein TERM 686 981567 - 981595 + G 78 -9 -3.53811 | AGAGAAATTTTAACC CCCTTATTATCT TCCCT AGATAATATGGG TTTAGAAGAACTAAA PMM1038 981474 - 982919 + | hypothetical protein PMM1039 982921 - 983877 + | hypothetical protein TERM 687 984381 - 984361 - g 74 -6.1 -4.39287 | overlap 984362 TTAAGTATACGAAAA GGCATACTG GCC CAGCATGGC CAGCAAGCAGGACTC TERM 688 984389 - 984362 - g 77 -9.1 -3.22849 | overlap 984361 TAAGTATACGAAAAG GCATACTGGCC CAGCAT GGCCAGCAAGC AGGACTCTTAGAGAA PMM1040 983874 - 984734 + | transglutaminase-like superfamily protein PMM1041 984821 - 985405 + | hypothetical protein PMM1042 985489 - 986007 + | hpothetical protein PMM1043 986378 - 986019 - | lipoprotein TERM 689 986210 - 986233 + g 72 -3.3 -5.18561 | overlap 986202 CCGGATCTGAAAATG TTTTTTCAT CATCTC GTGAAAAAA TTTTTTCAATATTTG TERM 690 986250 - 986264 + g 72 -5 -4.92828 | TTTTTCAATATTTGA CTCTTT ACT AAGGAG TTTCTTTTTAAATTT rbsK 987559 - 986582 - | putative pfkB family carbohydrate kinase PMM1045 987580 - 987861 + | hypothetical protein TERM 691 987871 - 987859 - T 83 -3.5 -6.15717 | GAAATAGAAAAAAAA TAAAT ATT ATTTA TATAAAACTTTTAAA PMM1046 989111 - 987882 - | major facilitator superfamily multidrug-efflux transporter TERM 692 988030 - 988006 - G 71 -2.1 -5.41746 | AATGGTCCAAAAAAA TATCCCATTGC AAA ACATTGTGATA AAAGTGCTAGTGCAT TERM 693 988096 - 988079 - G 87 -8.5 -4.28254 | opp_overlap 988082 GGGCAATACTGAAAA CAACATC TGTA GATGTTG GTAGAAAGGAAGATG TERM 694 990593 - 990580 - g 81 -3.9 -5.65678 | AGAAAATATAAAAAA TAATG AAAG CATTA AAGTTATAAAAAATC PMM1047 989114 - 990676 + | putative dienelactone hydrolase PMM1048 991695 - 990673 - | putative ABC transporter, oligopeptides TERM 695 991426 - 991409 - G 70 -7.1 -3.57389 | opp_overlap 991408, overlap 991407 GATTTAAGAATAATA TCAAGAA CCGG TTCTTGA GTACTTAAAGATTCT PMM1049 993259 - 991688 - | ABC transporter substrate-binding protein PMM1050 993541 - 993281 - | hypothetical protein thrA,hom 994905 - 993604 - | homoserine dehydrogenase PMM1052 995366 - 994941 - | hypothetical protein PMM1053 995961 - 995404 - | hypothetical protein ruvC 996444 - 995971 - | crossover junction endodeoxyribonuclease RuvC chlI 997537 - 996449 - | protoporphyrin IX magnesium chelatase subunit ChlI PMM1056 998544 - 997801 - | tRNA/rRNA methyltransferase cytM 998954 - 998550 - | cytochrome cM petG 998989 - 999108 + | cytochrome b6-f complex subunit PetG TERM 696 999128 - 999113 - T 80 -6.2 -5.17353 | ATATGGATTAAAAAA GTCAAT TTTG ATTGAC CATAAGTCCTAACAT PMM1059 999681 - 999094 - | hypothetical protein hisH 1000314 - 999697 - | imidazole glycerol phosphate synthase subunit HisH trxA 1000647 - 1000324 - | thioredoxin TERM 697 1000469 - 1000485 + g 74 -6.7 -4.23528 | TTTGGATTCTCATCT GTATTTA ATT TAAATAC TTTGATTTTACCTTC TERM 698 1000762 - 1000747 - R 100 -10.4 -5.15381 | opp_overlap 1000746 1000745, overlap 1000734 AACAGACTTAAAAAA GCCCGA TAAA TCGGGC GATTTGGTGTGTGAG TERM 699 1000783 - 1000796 + r 72 -8.1 -3.14693 | overlap 1000781 1000779 GGTGTGTGAGGAGTA TGGGG TTTC CCCCA TGTATTAATGATAAC guaB 1002019 - 1000856 - | inositol-5-monophosphate dehydrogenase TERM 700 1003685 - 1003669 - g 75 -8.1 -3.73756 | overlap 1003667 1003678 GAGCTTAGTAAAATA GATGAAA GAT TTTCATC TCCGAGAAAAACAGA gyrA 1002199 - 1004802 + | DNA gyrase subunit A TERM 701 1005722 - 1005739 + G 72 -7.1 -3.90048 | GAAGAGCTCCACTTC TTGCTAA AAAA TTAGCAA TCTTTTTGAAAGAAC crtL1 1004827 - 1006038 + | putative lycopene beta cyclase PMM1065 1007627 - 1006044 - | hypothetical protein TERM 702 1007523 - 1007535 + g 79 -2.7 -5.88061 | TTGGAATAACCAATC TTCTT CTA AGGAA TTTTTTTCATTTTTT TERM 703 1008506 - 1008519 + G 76 -5.3 -5.00616 | CATAATGATTTAGGT TTAGC TGTA GCTAA TTTTTTAGAAGCAGC leuA 1007864 - 1009504 + | 2-isopropylmalate synthase PMM1067 1009595 - 1009987 + | adenoviral fiber protein PMM1068 1011471 - 1009999 - | hypothetical protein TERM 704 1010297 - 1010307 + g 72 -2.6 -5.47159 | CTAAAATCACTCTCA TTAA AAT TTAA TTTTTTCTCTTCAGC TERM 705 1010666 - 1010679 + g 74 -3.1 -5.38054 | GCTTCAATAGAGAGT CTTCT AATA AGAGG TTTTTCTTTATCAGC folD 1011546 - 1012442 + | putative bifunctional methylenetetrahydrofolate dehydrogenase methenyltetrahydrofolate/cyclohydrolase crtE 1012480 - 1013382 + | polyprenyl synthetase TERM 706 1013548 - 1013536 - g 72 -9.1 -2.61144 | opp_overlap 1013533, overlap 1013535 1013533 TTATGTTTGAAACAG GAGGG ATG CCCTC AAGTCATTCTGCTTT PMM1071 1013397 - 1013876 + | hypothetical protein cbiA,cobB 1015267 - 1013873 - | putative cobyrinic acid a,c-diamide synthase PMM1073 1016579 - 1015278 - | putative glucose 6-phosphate dehydrogenase effector OpcA TERM 707 1015811 - 1015799 - G 72 -4.9 -4.77438 | ATGGAGGATCAAAAA TCATT GCT AATGA TTCACGCCAACTTTT zwf 1018110 - 1016587 - | glucose-6-phosphate 1-dehydrogenase TERM 708 1016697 - 1016715 + g 73 -9 -2.9348 | overlap 1016687 TCCAAGGAGCGTCTT CCATTAAT TCT ATTAATGG TGTATAAAGTTTCCA petH 1019336 - 1018224 - | ferredoxin-NADP oxidoreductase (FNR) TERM 709 1019523 - 1019512 - H 70 -3 -5.4833 | opp_overlap 1019512 TTATTTAATAAAAAA TTCA TCTA TGAA TAATTCTCAAAGATC PMM1076 1019519 - 1020055 + | hypothetical protein PMM1077 1021315 - 1020197 - | adaptive-response sensory kinase PMM1078 1021422 - 1021964 + | hypothetical protein PMM1079 1022033 - 1022473 + | Villin headpiece domain-containing protein kprS 1023474 - 1022479 - | ribose-phosphate pyrophosphokinase TERM 710 1024751 - 1024741 - g 77 -4 -5.41746 | opp_overlap 1024728 1024721, overlap 1024728 1024719 AATCTTTTAAAAAAA GATT TAA AATC TGATTATCTACCTAT malQ 1023724 - 1025244 + | putative 4-alpha-glucanotransferase PMM1082 1025748 - 1025260 - | helix-turn-helix PMM1083 1027516 - 1025858 - | kinase TERM 711 1028227 - 1028205 - g 73 -7.8 -3.68619 | opp_overlap 1028205, overlap 1028223 TTTAATTTACCGAAA TCAGCCTTAA GAT CTAAAGCTGA TTTAGTAGTCCATTC cad 1027581 - 1028978 + | Orn/Lys/Arg decarboxylase family protein TERM 712 1029515 - 1029536 + G 100 -13.1 -3.49475 | opp_overlap 1029513 1029509 TATTGGAAAGTCATT TGGGGAAAG GGCT CTTTCCCCA TTATCTCCAAGTAAA PMM1085 1028988 - 1029845 + | phosphatidate cytidylyltransferase todF 1030909 - 1030010 - | 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase gldA 1032009 - 1030915 - | putative glycerol dehydrogenase clpC 1034552 - 1032024 - | ClpC PMM1089 1035172 - 1034738 - | putative ribosomal-protein-alanine acetyltransferase TERM 713 1034940 - 1034950 + g 81 -4 -5.62288 | TGACTTCCATAACCT TTTC GAC GAAA TTTTTGTTTTATTGA TERM 714 1035189 - 1035208 + H 90 -8 -4.92812 | opp_overlap 1035184 GAAGTAAATATTTTC TCTCAAAA AATT TTTTGAGA TTTATTTTATTATAA TERM 715 1036078 - 1036092 + G 86 -10 -3.71998 | opp_overlap 1036075 1036074 AATTAAATATACTGA GGAGGA TGA TCCTCC TTCTATTGATGAGTG lysA 1035266 - 1036639 + | diaminopimelate decarboxylase PMM1091 1036668 - 1037558 + | hypothetical protein TERM 716 1038333 - 1038349 + G 73 -8.1 -3.4691 | opp_overlap 1038321 1038332 1038333, overlap 1038321 1038318 1038336 GAATCATTATCAAAT GAATCTT TTG AAGATTC TTGCTATTCTTCCCT uppS 1037562 - 1038380 + | undecaprenyl pyrophosphate synthetase BioB 1038373 - 1039380 + | biotin synthase PMM1094 1039377 - 1040309 + | hypothetical protein TERM 717 1040808 - 1040788 - g 70 -4.1 -4.93877 | opp_overlap 1040789, overlap 1040789 TTGTATTAAACAAAA TGAAAGAAA AAC TTTCTTTAA TTGAAAAAGTCTAAC F2J10.13 1040310 - 1040822 + | hypothetical protein lipA,lip 1041718 - 1040819 - | lipoyl synthase recR 1042320 - 1041721 - | RecR protein psbP 1042426 - 1042983 + | photosystem II oxygen evolving complex protein PsbP PMM1099 1044774 - 1043002 - | multidrug ABC transporter PMM1100 1045063 - 1044785 - | hypothetical protein TERM 718 1044964 - 1044974 + g 72 -2.6 -5.43414 | opp_overlap 1044964 TACAAAACAAATTTA TAAT TGA ATTA TTTTTTGTATCTGCT PMM1101 1046851 - 1045073 - | putative ATP-dependent RNA helicase recD 1048677 - 1046989 - | exodeoxyribonuclease V 67 kD polypeptide TERM 719 1048327 - 1048345 + g 77 -7.6 -3.98204 | TATGGGGATTTTATC TATTTTCT TTA AGAAAATA TTTATAACTCTATTT recB 1052308 - 1048679 - | UvrD/REP helicase subunit B TERM 720 1050550 - 1050560 + g 95 -4 -6.4275 | opp_overlap 1050538 1050535 GAGTACTGGCTTCAG TATC AAA GATA TTTTTTTTATTTTTA PMM1104 1052794 - 1052321 - | hypothetical protein recC 1055978 - 1052805 - | exodeoxyribonuclease V subunit C 125 kD polypeptide TERM 721 1052872 - 1052883 + g 83 -4.4 -5.63517 | opp_overlap 1052872, overlap 1052865 ATCATTTCCAAAAAA GAAG TCTC CTTC TTTTTTATTTCCAAA TERM 722 1052883 - 1052872 - G 73 -4.4 -5.03715 | opp_overlap 1052865 1052872 ATCATTTCCAAAAAA GAAG TCTC CTTC TTTTTTATTTCCAAA TERM 723 1053757 - 1053786 + g 70 -4.5 -4.8743 | gap 1, opp_overlap 1053766, overlap 1053758 1053760 TTATCAACTTCTTCT TTCTCATAATCAAA GTA TTTGATTATG-GAC TTTCTTTGTTTTACA TERM 724 1053758 - 1053785 + g 73 -8 -3.50831 | gap 1, opp_overlap 1053766, overlap 1053757 1053760 TATCAACTTCTTCTT TCTCATAATCAAA GTA TTTGATTATG-GA CTTTCTTTGTTTTAC TERM 725 1053760 - 1053784 + g 74 -9.5 -2.68872 | opp_overlap 1053766, overlap 1053758 1053757 TCAACTTCTTCTTTC TCATAATCAAA GTA TTTGATTATGG ACTTTCTTTGTTTTA TERM 726 1055466 - 1055456 - G 71 -5.4 -4.57474 | opp_overlap 1055454 1055456 GTAATTTATATAAAA TTGG TTG CCAA TATTCATTTGAATTT PMM1106 1056313 - 1055996 - | hypothetical protein pdxJ 1057039 - 1056323 - | pyridoxal phosphate biosynthetic protein PdxJ PMM1108 1057133 - 1057810 + | phospholipid/glycerol acyltransferase PMM1109 1057810 - 1058373 + | hypothetical protein PMM1110 1058383 - 1058613 + | BolA-like protein PMM1111 1058617 - 1058940 + | glutaredoxin-like protein PMM1112 1059259 - 1058990 - | hypothetical protein TERM 727 1059051 - 1059069 + g 74 -7.5 -3.81461 | opp_overlap 1059050, overlap 1059029 GGATTTATAAAACTG GATGGAT CTAAT ATCCATC TTTCAATTAATCTTT PMM1113 1059346 - 1060083 + | two-component response regulator PMM1114 1060586 - 1060080 - | hypothetical protein crtH 1062200 - 1060599 - | putative carotenoid isomerase gidA 1063569 - 1062157 - | tRNA (uracil-5-)-methyltransferase Gid TERM 728 1062988 - 1062971 - GR 79 -7.1 -4.43392 | overlap 1062968 CTAAAATTAAAATAA TCCAATT TATT AATTGGA CAATTTAAATATGCA pbsY 1063692 - 1063576 - | photosystem II protein Y TERM 729 1063796 - 1063815 + H 90 -5.8 -5.89947 | overlap 1063764 1063760 TGTATTTCAATTGTT CAACTTAG GATA TTAAGTTG TTTTTTTTACCTTTA hli4 1064501 - 1064608 + | high light inducible protein TERM 730 1064730 - 1064752 + T 73 -3.5 -5.61824 | gap 1, overlap 1064720 TTCCAGATTATATTA GTCCTT-CTT ATTT AAGTAAGGGC TTTTTTTCAATTTTG TERM 731 1065006 - 1065025 + T 83 -7.9 -4.65722 | opp_overlap 1065006 TTTAACAATAAAAAA GATCTGC AATAAA GCAGATC TTTCTTTGTATGTAA TERM 732 1065025 - 1065006 - T 100 -7.9 -5.64873 | opp_overlap 1065006 TTTAACAATAAAAAA GATCTGC AATAAA GCAGATC TTTCTTTGTATGTAA som 1066200 - 1065058 - | porin PMM1120 1068137 - 1066296 - | TPR repeat-containing sulfotransferase TERM 733 1068208 - 1068255 + r 90 -7.3 -5.4251 | gap 2, opp_overlap 1068221, overlap 1068210 1068221 TAACTTGAGAATTTC CT-CACAAAAAAA-AGACCTGCT GTTA AGCAGGCCTCTTTTTGTGTGTAG TTTTTTCTATCTAAG TERM 734 1068210 - 1068252 + r 89 -10.1 -3.48985 | gap 1, opp_overlap 1068221, overlap 1068208 1068221 ACTTGAGAATTTCCT CACAAAAAAA-AGACCTGCT GTTA AGCAGGCCTCTTTTTGTGTG TAGTTTTTTCTATCT TERM 735 1068221 - 1068240 + r 77 -7.8 -4.14422 | opp_overlap 1068221, overlap 1068210 1068208 TCCTCACAAAAAAAA GACCTGCT GTTA AGCAGGCC TCTTTTTGTGTGTAG TERM 736 1068240 - 1068221 - R 100 -10 -5.93809 | opp_overlap 1068210 1068208 1068221 TCCTCACAAAAAAAA GACCTGCT GTTA AGCAGGCC TCTTTTTGTGTGTAG som 1069419 - 1068274 - | porin TERM 737 1069469 - 1069482 + r 75 -5.3 -5.07941 | opp_overlap 1069469 TGAGTATAATCACAA GTATC AAAC GATAC TTTTTCTATGATTTT apt 1071279 - 1070764 - | adenine phosphoribosyltransferase TERM 738 1071023 - 1071039 + g 100 -10.9 -4.38154 | TTTTTAATTAATTCT CCAGGAA GTT TTCCTGG TTTTCTAGCAAATAT hupE 1072375 - 1071671 - | putative hydrogenase accessory protein TERM 739 1072949 - 1072968 + r 79 -5 -5.57396 | opp_overlap 1072947 AGAATCCAAGTCATA GAGAGG AATCCCAA CCTCTC TTTTTTATTGCTTGT PMM1124 1074558 - 1073083 - | natural resistance-associated macroph PMM1125 1075076 - 1074807 - | regulatory proteins, deoR f TERM 740 1075153 - 1075138 - R 83 -6.1 -5.28176 | opp_overlap 1075138 TTTATGCATAAAAAA GAGGG TTTTAT CCCTC TAAGTTTATCTATAG TERM 741 1075419 - 1075392 - R 82 -8.5 -4.42235 | gap 1, overlap 1075389 1075394 AATTCTTAAAAATAA CG-CCCAGTGCT TTGGG AGCACTAGGTCG CAGGTTTGAATCCTT TERM 742 1075416 - 1075394 - R 78 -9.9 -2.53831 | overlap 1075392 1075389 TTCTTAAAAATAACG CCCAGTGCT TTGGG AGCACTAGG TCGCAGGTTTGAATC PMM1126 1077651 - 1075636 - | hypothetical protein PMM1127 1078721 - 1078230 - | NAD(P) transhydrogenase beta subunit TERM 743 1078880 - 1078892 + r 75 -7.7 -3.95424 | GTCGCAGGTTCGAAT CCAGT CTC ACTGG TTTACTCTTCATGAT TERM 744 1079011 - 1078969 - R 100 -14.5 -2.62184 | opp_overlap 1078969, overlap 1078983 GCTTTGCTTACAGCA TTGTCTGTTTAATACTACT AAATA AGCAGTATTAAACAGACGA TTGCTCCAATACTAA TERM 745 1078969 - 1079011 + r 100 -14.5 -3.17212 | opp_overlap 1078969 1078983 GCTTTGCTTACAGCA TTGTCTGTTTAATACTACT AAATA AGCAGTATTAAACAGACGA TTGCTCCAATACTAA hli15 1079445 - 1079191 - | high light inducible protein PMM1129 1080400 - 1080146 - | Notch domain-containing protein TERM 746 1080419 - 1080409 - R 70 -4 -5.09895 | opp_overlap 1080409 TAGCCATTTAAAAAA GAAT TTT ATTC CTTTAATATAGAGTA PMM1130 1080760 - 1080485 - | hypothetical protein PMM1131 1080869 - 1081120 + | hypothetical protein TERM 747 1082487 - 1082469 - g 71 -8.2 -3.18366 | opp_overlap 1082469, overlap 1082467 1082465 TCCCGAACCAATATA TGTTTCGC ACA GCAAAACA TTATTTAAAGAATTG TERM 748 1083622 - 1083641 + G 71 -2.2 -5.33026 | opp_overlap 1083623, overlap 1083623 CATATTCCTGACAAT ATATCTTT TTTA AAAGATAG TTTTTATTTACCTTC PMM1132 1082269 - 1083972 + | hypothetical protein PMM1133 1084419 - 1084027 - | hypothetical protein TERM 749 1084940 - 1084988 + H 83 -9.3 -3.55444 | opp_overlap 1084944 1084947, overlap 1084936 AGTTCATTGATTAAT GTAATTATTTACTAATTAAAGTT GAA ATTTTTAATTAGTAAATGAGTAC TTTAACCAATAAAAC PMM1134 1085062 - 1085352 + | phosphatidylinositol-specific phospho hli14 1085656 - 1085862 + | high light inducible protein TERM 750 1086055 - 1086025 - T 71 -5.7 -4.56607 | gap 2, opp_overlap 1086025 TTATCAATTATAAAA TGCTAGTT-TC-TCT TCT AGAAGACAACTAGCA TTTACTTTATAATTT TERM 751 1086124 - 1086096 - T 87 -6.1 -5.7946 | opp_overlap 1086096 1086098 TTTTTAATAAAAAAA GAGTTCGATTT TTAGCTG AAAACGAACTC TCATTACCTAATTCT PMM1136 1086744 - 1086493 - | hypothetical protein PMM1137 1087274 - 1086978 - | cytochrome b(C-terminal)/b6/petD PMM1138 1089046 - 1087955 - | translation-associated GTPase TERM 752 1089132 - 1089146 + H 71 -7.2 -3.91689 | opp_overlap 1089132 TGGATAAGTTAATCA TAATCG TTT CGATTA TTTACTATAGTTTCT PMM1139 1089194 - 1090255 + | membrane fusion protein TERM 753 1091174 - 1091200 + G 74 -5.2 -4.86621 | opp_overlap 1091168 1091176, overlap 1091168 TACAAAAACTTGAAT TATCAACTTTAC TTA GGCAAGTTGATA TTTTTAATTCAGCAT polA 1090252 - 1093182 + | DNA polymerase I cysS 1093207 - 1094685 + | cysteinyl-tRNA synthetase TERM 754 1095845 - 1095831 - g 95 -5.8 -5.79595 | opp_overlap 1095824 1095831, overlap 1095824 TTCTAAAAGAAAAAA TTTCTT TTC AAGAAA TTCCTATCTTTATAA dxr 1094783 - 1095997 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase PMM1143 1096003 - 1096332 + | hypothetical protein PMM1144 1097444 - 1096353 - | putative hydrolase of the alpha/beta-hydrolase fold pntB 1098867 - 1097431 - | putative nicotinamide nucleotide transhydrogenase, subunit beta TERM 755 1097615 - 1097586 - G 70 -7.3 -3.57406 | gap 1, opp_overlap 1097583, overlap 1097584 TTTTTATTACAAAGA CTGTTCTTGCT-TC TTG GACATCAAGAACAG GCATTCCATATAAAG pntA-2 1099177 - 1098881 - | putative nicotinamide nucleotide transhydrogenase, subunit alpha 2 (A2) TERM 756 1099215 - 1099232 + r 74 -8.5 -3.39895 | TCAAAAACTTTATTT TGAAGGA TAAC TCCTTCA TTACTTAATAAACAG pntA-1 1100323 - 1099193 - | putative nicotinamide nucleotide transhydrogenase, subunit alpha 1 (A1) TERM 757 1100797 - 1100809 + G 71 -7.7 -3.53091 | opp_overlap 1100796 ATTCATACAAGAACT CGTAC AGG GTACG TTTGAAGAAGCGAAT TERM 758 1100915 - 1100904 - g 74 -3 -5.39407 | GAGAAAAAAAAGAAA TTCT TTTA AGAA AAATATCATCAAAAT TERM 759 1100964 - 1100952 - g 73 -9.1 -2.92714 | opp_overlap 1100950, overlap 1100949 CTGAAGAAAAAGTTA GCGAG GAG CTCGC AATAAATTCAGCGAA PMM1148 1100456 - 1101034 + | EF-1 guanine nucleotide exchange doma TERM 760 1101246 - 1101227 - g 82 -10 -3.19389 | GAATTGATGTAGCAA CCTGCTGG GCAA CCAACAGG ATATCAGTAATGGAT PMM1149 1101190 - 1101426 + | hypothetical protein PMM1150 1101483 - 1102859 + | putative thioredoxin reductase infA 1103142 - 1102876 - | translation initiation factor IF-1 TERM 761 1103300 - 1103311 + r 70 -4.4 -5.03715 | opp_overlap 1103300 GACCATAATAAAAAT TTGC CTTT GCAA TTTTTTCAGGATCCT ycf39 1104474 - 1103512 - | putative chaperon-like protein for quinone binding in photosystem II petM 1104631 - 1104533 - | cytochrome b6-f complex subunit PetM PMM1153 1104668 - 1105690 + | putative alpha/beta hydrolase superfamily protein ilvH 1105694 - 1106218 + | acetolactate synthase 3 regulatory subunit ppiA 1106748 - 1106215 - | cyclophilin-type peptidyl-prolyl cis-trans isomerase PMM1156 1107428 - 1106871 - | photosystem I assembly protein Ycf4 TERM 762 1106962 - 1106978 + g 79 -3.7 -5.68039 | TTAAGTTCTCCTGCT CCACT CAAAGGA AGTGG TTTTTTTCTGCCTTT psbD 1107613 - 1108689 + | photosystem II PsbD protein (D2) psbC 1108673 - 1110055 + | photosystem II PsbC protein (CP43) TERM 763 1110091 - 1110075 - T 100 -10.9 -4.15508 | opp_overlap 1110075 AATCAATTTTCAAAA GACCCTT TTT AAGGGTC TTTTTTTTATGGGAA TERM 764 1110075 - 1110091 + T 100 -10.9 -5.93809 | opp_overlap 1110075 AATCAATTTTCAAAA GACCCTT TTT AAGGGTC TTTTTTTTATGGGAA PMM1159 1110724 - 1110098 - | Maf-like protein TERM 765 1111493 - 1111479 - g 74 -2.1 -5.70761 | opp_overlap 1111490 AAAACAAAACAAAAA TCCCT GTTTT AGGAA TAATTCCTTGGTTAG TERM 766 1111797 - 1111783 - g 86 -5.8 -5.48787 | AGAAGATATAAAAAA TTATTC AAC GAATAA AGGTAATATTTTTGG cobB 1110791 - 1112320 + | cobyric acid synthase PMM1161 1112317 - 1112568 + | hypothetical protein PMM1162 1114389 - 1112581 - | hypothetical protein TERM 767 1113528 - 1113513 - G 74 -6.2 -4.50976 | TTGTATATGAGAAAA GAAGAT CAAC ATCTTC AGCAATATCTAAAAC TERM 768 1114247 - 1114261 + g 100 -5.8 -5.94214 | TTCCAAATAATCTTT TTCAAA TCA TTTGAA TTTTTTTCTTGTATT TERM 769 1114544 - 1114526 - H 90 -10.4 -3.47494 | opp_overlap 1114517 1114520, overlap 1114517 ATGTAATCATTATAA TGATGGAT TAG ATCCATCA GAAGAATATTTAAGA PMM1163 1114579 - 1115091 + | trehalase futA 1117144 - 1116122 - | putative iron ABC transporter, substrate binding protein TERM 770 1116699 - 1116711 + g 75 -4.9 -4.95155 | GGATTGGTTAGATCC TCAAA ATT TTTGA TTTTTGTAATATCCA glyQ 1118146 - 1117277 - | glycyl-tRNA synthetase subunit alpha PMM1166 1118632 - 1118243 - | hypothetical protein PMM1167 1118991 - 1118659 - | macrophage migration inhibitory factor family protein TERM 771 1119580 - 1119570 - g 77 -4 -5.48303 | opp_overlap 1119570 1119576, overlap 1119576 AGAACTCGAAAAAAA CAAA ATT TTTG ATTCTTATTGGAAAC TERM 772 1119884 - 1119866 - g 89 -7.6 -4.93547 | opp_overlap 1119876, overlap 1119850 1119876 TTAATGAACCAAAAA TCATTAAA AAG TTTAATGA AACTTCTCTTAATAT F4P13.20 1119310 - 1119954 + | hypothetical protein PMM1169 1120064 - 1120309 + | hypothetical protein PMM1170 1120971 - 1120321 - | hypothetical protein isiB 1121553 - 1121029 - | flavodoxin FldA TERM 773 1122368 - 1122403 + G 72 -2.6 -5.36441 | gap 1, overlap 1122378 TTTTTCAAATGATGT GCTTGGGTATTCTTCTA AAA TGGAAGA-TCCCTTAGC TTTTTTATCTGAGAA PMM1172 1121694 - 1122428 + | hypothetical protein PMM1173 1122428 - 1122700 + | hypothetical protein PMM1174 1122796 - 1123020 + | hypothetical protein PMM1175 1123222 - 1124007 + | AEC family transporter PMM1176 1124118 - 1124369 + | CopG family protein PMM1177 1126171 - 1124366 - | hypothetical protein TERM 774 1125062 - 1125052 - G 77 -4 -5.33331 | CAAACAGAATAAAAA GATT AAT AATC CACAAAGAAGAAAAG TERM 775 1125364 - 1125350 - G 78 -5.7 -4.88736 | CATTACGTATAAAAA GAACC AAATA GGTTC TGCATGATTATTAAC TERM 776 1126144 - 1126126 - G 80 -6.1 -4.77757 | opp_overlap 1126125 1126126 TTCCAAAAACCAAAA CTACTAA AAAAG TTAGTAG CCTTTCTTTAGACTT PMM1178 1127262 - 1126168 - | glycosyl transferase group 1 PMM1179 1128233 - 1127292 - | SMR family transporter PecM sppA 1128287 - 1129096 + | signal peptide peptidase SppA (protease IV) tyrA 1129104 - 1129487 + | chorismate mutase PMM1182 1129553 - 1130128 + | hypothetical protein rpmH 1130159 - 1130296 + | 50S ribosomal protein L34 rnpA 1130307 - 1130696 + | ribonuclease P protein component PMM1185 1130693 - 1131106 + | hypothetical protein TERM 777 1132082 - 1132098 + G 72 -7.3 -3.7764 | opp_overlap 1132077, overlap 1132077 1132081 GCTAATAAAATTACT CCTGTAA TGA TTACGGG TATGTTTTTGTTTTT PMM1186 1131179 - 1132318 + | putative inner membrane protein translocase component YidC PMM1187 1132339 - 1133805 + | hypothetical protein TERM 778 1134949 - 1134967 + G 78 -9.6 -3.21593 | overlap 1134947 TTTCGATCTTGAAGT TTGGCTGC CGA GCAGTCAA TGTTATAGAGAAATA serS 1133930 - 1135204 + | seryl-tRNA synthetase PMM1189 1135214 - 1136293 + | hypothetical protein rpsN 1136359 - 1136661 + | 30S ribosomal protein S14 TERM 779 1138413 - 1138424 + G 76 -7.2 -4.19123 | opp_overlap 1138413 1138411 TGGATATGAAAATTA CGGG CTTA CCCG TTTCTGTAATTTCTG pnp 1136852 - 1139017 + | polynucleotide phosphorylase/polyadenylase PMM1192 1139951 - 1139010 - | 3'-phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase TERM 780 1140237 - 1140252 + GH 73 -7.6 -3.65201 | ATGCCAAGTATTTGT GATCCT GGGG AGGATC TTGTTAAGAATGTTA TERM 781 1140600 - 1140586 - gH 72 -3.6 -5.14645 | ATAACGTAATAAAAA CTTTTC AAG AAAAAG AGGTAATAGGTGAGT PMM1193 1139925 - 1140788 + | putative tetrapyrrole methylase family protein PMM1194 1140810 - 1141028 + | hypothetical protein PMM1195 1141688 - 1141032 - | hypothetical protein TERM 782 1141637 - 1141655 + g 90 -4 -6.02345 | opp_overlap 1141641 TTGAATTGCCTTGAA TAAATAAA TCT TTTATTTG TTTTTTTTGTAGTTC TERM 783 1141694 - 1141707 + H 70 -2.5 -5.52079 | opp_overlap 1141694 TCTTGGACACAAAAT TTAAT ATGG ATTAA TTTTTATTTTACTAT TERM 784 1142135 - 1142125 - g 77 -3.2 -5.63517 | GCTGCAAATAAAAAA GGAC AAG ATCC AGCTCTTCTTATCCT manC 1141786 - 1143243 + | GDP-mannose pyrophosphorylase TERM 785 1143249 - 1143235 - f 83 -3.6 -5.8187 | TATGGAAGAAAAAAA GATCTT TAG AAAATC TTTATTTTGGCACTA TERM 786 1143378 - 1143388 + F 73 -2.6 -5.77853 | opp_overlap 1143362, overlap 1143364 1143380 1143382 CTTCAAAATAATGAT TATT CTG AATA TTTTTTTTCAGGATT TERM 787 1143933 - 1143970 + G 81 -2.1 -6.08563 | opp_overlap 1143934, overlap 1143934 ATGAGATTTGAGAAT AGAATCCAATTTTTACT TGAT ATTGCAAATTGGATTCC TTTTTTTTATGTATT TERM 788 1144333 - 1144297 - g 76 -3.3 -5.38348 | overlap 1144302 AAAAATACGAAAAAA GATATCAAAAAATTT TTGCATT AAGTTTTTTAATATC GATAGTTATTCTGAT PMM1197 1143639 - 1145000 + | hypothetical protein PMM1198 1146697 - 1145324 - | hypothetical protein TERM 789 1146327 - 1146343 + g 74 -9.5 -2.56164 | opp_overlap 1146294 1146330, overlap 1146326 1146330 TTATCTGTTCCAATC CAAGGAT CCA ATCCTTG ATTAATAATTGCCCA PMM1199 1147942 - 1146830 - | hypothetical protein TERM 790 1147876 - 1147886 + g 80 -5.4 -5.24129 | AGATATATAAATTCT CGAA TTT TTCG TTTTTTATAAGCAGG PMM1200 1149017 - 1148064 - | glycosyl transferase family protein PMM1201 1150144 - 1149095 - | putative CDP-tyvelose-2-epimerase (RfbE) PMM1202 1151025 - 1150171 - | nucleoside-diphosphate-sugar epimerase rfbG 1152123 - 1151041 - | CDP-glucose 4,6-dehydratase ddhA 1152910 - 1152143 - | glucose-1-phosphate cytidylyltransferase TERM 791 1152281 - 1152308 + g 93 -10 -4.54449 | overlap 1152282 TGCAAGTTTTTGCAT TGGCTTTTGTTC CCAT GAACAAAAGTCG TTTTCTATAAAATCT TERM 792 1152282 - 1152307 + g 88 -11.3 -3.31946 | overlap 1152281 GCAAGTTTTTGCATT GGCTTTTGTTC CCAT GAACAAAAGTC GTTTTCTATAAAATC PMM1205 1154157 - 1152958 - | NDP-hexose 3,4-dehydratase PMM1206 1155683 - 1154292 - | hypothetical protein TERM 793 1155815 - 1155835 + r 70 -7.1 -3.69618 | ATAAATTATTCTCAC TAAAAATTT TAA AAATTTTTA TCTTTTAGAATTACC PMM1207 1157035 - 1156082 - | putative fucose synthetase TERM 794 1156368 - 1156357 - G 70 -4.4 -4.74103 | overlap 1156358 TTTCTAAGGTAAAAA CTGA TGCC TCAG CTAGGTCATCAACAT gmd 1158142 - 1157069 - | gdpmannose 4,6-dehydratase TERM 795 1157275 - 1157309 + g 72 -2.7 -5.47159 | opp_overlap 1157275, overlap 1157281 1157282 1157285 CAACCTCTTGCAAAC CTGAGCCCTCCCAGC GAATA GCTGGTAGATTTCGG TTTTTTCTATTCCAG TERM 796 1157518 - 1157535 + g 93 -8.5 -4.91109 | TACCTGAATCAATTC TCACAAG ACCC CTTGTGA TTTTTCTCGTAACAA TERM 797 1158146 - 1158156 + r 86 -4 -6.09196 | TGAGCTATTCAATTC GTTT CAA AAAC TTTTTTTATTTTAGA galE 1159339 - 1158248 - | UDP-glucose-4-epimerase PMM1210 1160415 - 1159390 - | putative nucleotide sugar epimerase TERM 798 1160243 - 1160267 + g 78 -6.7 -4.48902 | CCCTCATATTTTCCT TTATTAAATTT TGT AGATTTAATAA TTTCTTTCAATCTAT TERM 799 1161527 - 1161517 - g 74 -6.8 -4.20783 | AGTGGAGGTAATAAA CCTC TTA GAGG AAATATTTATAATGT PMM1211 1160596 - 1161762 + | polysaccharide export or synthesis protein PMM1212 1162464 - 1161772 - | hypothetical protein PMM1213 1163628 - 1162468 - | glycosyl transferase group 1 TERM 800 1162685 - 1162673 - G 82 -7.7 -4.57482 | opp_overlap 1162671 1162673 CCATCTATAAACAAA GAGGA AAG TCCTC TATTAACTATTGCAA TERM 801 1163425 - 1163411 - G 91 -4.4 -5.93809 | TCCTTAGAAAAAAAA TTTTTA ATA TAAAAA AAAATATAATTTACA TERM 802 1163448 - 1163430 - G 100 -6.2 -6.35605 | opp_overlap 1163427 1163430 TAATATAAAAAAAAA TATAATTT ACA AAATTATA TTGTTTTACTTTGTT TERM 803 1163430 - 1163448 + g 74 -6.2 -4.42237 | opp_overlap 1163430, overlap 1163427 TAATATAAAAAAAAA TATAATTT ACA AAATTATA TTGTTTTACTTTGTT PMM1214 1163795 - 1164445 + | phosphatase TERM 804 1164929 - 1164915 - g 72 -5.8 -4.43576 | ATTAGAGATAATAAA TCAATT AGA AATTGA ACTTAAAGATAAGGG TERM 805 1165011 - 1165001 - g 74 -4 -5.24291 | AAAAGGAAAATAAAA TTCA CAC TGAA GATAATTTAATAATA TERM 806 1165114 - 1165124 + G 76 -5.4 -5.06816 | AACTTAACAATATTG CCTT TTA AAGG TTTTTATTGGAAGAT PMM1215 1164442 - 1165665 + | hypothetical protein PMM1216 1165667 - 1166386 + | putative sugar-phosphate nucleotidyl transferase PMM1217 1166389 - 1167000 + | putative phosphoheptose isomerase TERM 807 1167508 - 1167490 - g 76 -6.2 -4.67478 | GAAAGAGAAAAAGAA TTTTTAAA AGC TTTAAAAA GACAGAATATTTCTT TERM 808 1168292 - 1168282 - g 83 -6.8 -4.81551 | TACTCACATCAAAAA GGAG AAT CTCC AAGGGTACAAGCATT rfaE 1167016 - 1168518 + | putative ADP-heptose synthase PMM1219 1168587 - 1169534 + | putative nucleoside-diphosphate sugar epimerase TERM 809 1169873 - 1169862 - g 81 -3 -5.71712 | TCTCAGACAAAAAAA GAAT CGAA ATTC AACTAAAAGGAATAA TERM 810 1169957 - 1169941 - g 76 -7.3 -4.19624 | TATTTGCAATATAAA CAGAGAA TAT TCCTCTG GATATATAAAAGAGA TERM 811 1170342 - 1170307 - g 90 -4.2 -5.99318 | AAAAAAAAATAAAAA CTACTTAAAAAATAAA AATA TTTATTCTTATAGTAG ATTATGGCCATATTT PMM1220 1169558 - 1170517 + | putative glycosyl transferase TERM 812 1170509 - 1170499 - f 76 -2.6 -5.86976 | GCATAAAATAAAAAA TTTT AAA AAAA GGGACTAATATGAGA TERM 813 1171192 - 1171173 - g 76 -3.6 -5.40004 | overlap 1171189 GATCAAATCAAAAAA TCAAATTC AAAT GAAATTGA AGTATCAATAGCTGG PMM1221 1170519 - 1171619 + | glycosyl transferase, group 1 TERM 814 1172439 - 1172451 + G 72 -3.5 -5.1285 | opp_overlap 1172434 AGATGAAGCATTATT TTATA AAC TATAA TTTATTTTATTTTTT PMM1222 1171619 - 1172602 + | glycosyl transferase TERM 815 1173566 - 1173554 - g 91 -3.5 -6.15828 | TTTACCAAAAAAAAA TTATT GCA AATAA CATATCATCTTTAAG PMM1223 1172611 - 1173759 + | putative glycosyl transferase, group 1 TERM 816 1174281 - 1174258 - T 88 -6.9 -5.62045 | ACATATAATAAAAAA CTAGAATTT GATTTT AAATTCTAG ATAAGATTAAAAGCC gumB 1175343 - 1174288 - | putative polysaccharide export protein TERM 817 1175234 - 1175244 + g 77 -4 -5.3798 | ATATAAAGATTATTG TTAG TTT CTAA TTTTTCTTCTTCTTG TERM 818 1175395 - 1175437 + H 74 -6 -4.72986 | opp_overlap 1175409 AGATAAATTTTTCAA TTTTTTTATAAAATTATATA TTA TATTTGATTTTAAAAAAAAA TTTTTAATAAGCATA PMM1225 1175464 - 1177275 + | hypothetical protein PMM1226 1177947 - 1177267 - | hypothetical protein TERM 819 1177531 - 1177520 - G 74 -3 -5.42164 | GACAAAGAATAAAAA GAAA TAGA TTTC CAGATTATTATTTGA PMM1227 1179423 - 1178446 - | putative UDP-N-acetylglucosamine-1-phosphate transferase TERM 820 1179891 - 1179901 + G 71 -5.4 -4.63218 | TAATTTATGGTAATT CCAA AGT TTGG TTTTCTTGAGAGACC TERM 821 1180841 - 1180824 - g 76 -7.1 -4.183 | TCAATTCCTAAGAAA GATAAGT GGTT ACTTATC TCGAAAGAAAAATTT PMM1228 1179882 - 1181048 + | hypothetical protein PMM1229 1181148 - 1182122 + | dehydrogenase, E1 component PMM1230 1182125 - 1183054 + | dehydrogenase E1 component beta subunit TERM 822 1183140 - 1183120 - g 71 -8.5 -2.88118 | overlap 1183119 1183128 TCAGTTGAGAAGAAT TTTATAAAG CAA CTTTATAAA GATGCTGATGCCCAC PMM1231 1183051 - 1183959 + | hypothetical protein PMM1232 1183956 - 1185212 + | methyltransferase TERM 823 1185373 - 1185357 - g 74 -2.3 -5.61913 | opp_overlap 1185357 AATAAATATAAAAAA GAATTTT TTG AAGATTC ATTTGTAATCAATAC TERM 824 1185885 - 1185869 - g 74 -3.8 -5.29385 | AAGCGAATTAAAAAA TTTCAA TTGGT TTGAAA TAGCAAGAATTTTAT rfbD 1185213 - 1186052 + | putative dTDP-4-dehydrorhamnose reductase PMM1234 1186069 - 1187100 + | zinc-containing alcohol dehydrogenase superfamily protein PMM1235 1187097 - 1187927 + | hypothetical protein PMM1236 1187931 - 1188848 + | hypothetical protein PMM1237 1188845 - 1189453 + | hypothetical protein TERM 825 1189973 - 1189985 + G 72 -4.9 -4.77759 | overlap 1189976 GAAAGTTCGTTTTAT GAATT AGA AATTC TTTTTAATAAATTAT PMM1238 1189454 - 1190461 + | hypothetical protein hetA 1190636 - 1192420 + | ABC transporter TERM 826 1192830 - 1192816 - g 70 -6.4 -4.2528 | opp_overlap 1192816, overlap 1192817 TGGGAACGCAATAAA CCTTCC TTG GGAAGA TAATTATTTTGACTT PMM1240 1192421 - 1193092 + | methyltransferase TERM 827 1194207 - 1194193 - g 74 -7.2 -4.015 | opp_overlap 1194200 TGATTCATTAAATAA TTTGAG ATT CTCAAA AAGAATTTGGGAATC PMM1241 1193591 - 1194439 + | hypothetical protein TERM 828 1194483 - 1194493 + T 73 -5.4 -4.79352 | opp_overlap 1194483 ATTGGTAAAACAAAT TTGC TAT GCAA TTTTCTTCTGCATCA PMM1242 1195478 - 1194486 - | hypothetical protein PMM1243 1196339 - 1195494 - | methyltransferase TERM 829 1195770 - 1195747 - G 74 -7.6 -3.89354 | opp_overlap 1195746 1195747 TCCCTAAACCAAGAA TATGAATGAC TATC ATCATTCATA CTTTTATTCATTTTC PMM1244 1196504 - 1196346 - | hypothetical protein PMM1245 1196884 - 1196504 - | hypothetical protein PMM1246 1198722 - 1196890 - | carbamoyltransferase TERM 830 1198317 - 1198307 - G 83 -6.8 -4.87665 | GGTGAGGGATAAAAA GCAG ATG CTGC ATGAGATAAATGATG PMM1247 1199985 - 1198792 - | hypothetical protein TERM 831 1200486 - 1200502 + r 71 -5.3 -4.70169 | opp_overlap 1200486 ATGCTTCGAAAAAAT TTTTTTA TAT TAAAAAA TTTTCTTGGCTCTAA TERM 832 1200898 - 1200912 + r 90 -4.4 -6.23209 | TTCAAAGAAATTCTA TAAATT TTT AATTTA TTTTTTTTTACTTAA PMM1248 1201308 - 1200910 - | hypothetical protein PMM1249 1202123 - 1201356 - | hypothetical protein TERM 833 1201981 - 1201965 - G 70 -8.1 -3.01001 | opp_overlap 1201964 1201965 GATTTTGAAAGGATA GTCAAAT TCA ATTTGAC GTTTTAATTCTTTAT TERM 834 1201965 - 1201981 + g 71 -8.1 -3.37141 | opp_overlap 1201965, overlap 1201964 GATTTTGAAAGGATA GTCAAAT TCA ATTTGAC GTTTTAATTCTTTAT PMM1250 1202683 - 1202291 - | hypothetical protein PMM1251 1204539 - 1202686 - | carbamoyltransferase TERM 835 1202871 - 1202882 + g 71 -2.2 -5.45802 | AGGTATTAACAAGCG TTGG GCAA CCAG TTTTTCTTTTGAAGG TERM 836 1204414 - 1204426 + g 72 -3.3 -5.31877 | TGATAATTTCGGGAA GCTTG AGT CATGC TTTTTTCTAGTAAAT PMM1252 1205054 - 1205506 + | acetyltransferase PMM1253 1205599 - 1206240 + | methyltransferase PMM1254 1207254 - 1206280 - | glycosyl transferase family protein TERM 837 1206500 - 1206480 - G 100 -11.3 -4.39724 | overlap 1206495 AAACCAAAGAAAGAA TTGAACTAC TAA GTAGTTCAA GAGAACCTATATTAA PMM1255 1208536 - 1207244 - | hypothetical protein TERM 838 1208595 - 1208611 + r 83 -10.9 -2.62616 | TCGAACCGCTGACCC CCTGCAT GCC ATGCAGG TGCTCTACCAGCTGA PMM1256 1209992 - 1209114 - | glycosyl transferase family protein PMM1257 1211374 - 1210385 - | dTDP-glucose 4,6-dehydratase TERM 839 1210497 - 1210513 + g 81 -3.1 -5.71712 | overlap 1210499 ACTTCAGGTTCCCAA TTTAAAA CAT TTTTAGA TTTTTTTATATCAAG TERM 840 1212430 - 1212412 - gH 70 -6 -4.25074 | overlap 1212423 GATCAAATGCTAAAA GATATACC ACA GGTAAATC ACCCTAAAAGATTTT PMM1258 1211578 - 1212726 + | pyridoxal-phosphate-dependent aminotransferase PMM1259 1212680 - 1213846 + | pyridoxal-phosphate-dependent aminotransferase PMM1260 1213939 - 1214874 + | nucleoside-diphosphate-sugar epimerase ugd 1214864 - 1216288 + | UDP-glucose 6-dehydrogenase lexA 1216901 - 1216278 - | SOS function regulatory protein, LexA repressor TERM 841 1216868 - 1216856 - G 82 -7.7 -4.67353 | TTATCCAGTTAAAAA GCTCA TTT TGAGC AGCGGTAAGATCATT TERM 842 1216903 - 1216932 + r 70 -8 -3.29837 | ATAGAAGGGGGCATT GGAACAAATGTA CTCTAA TACATTTGTACC TCTTAATATTTAAAA TERM 843 1216981 - 1217003 + r 71 -7 -3.88832 | opp_overlap 1216981 1216984, overlap 1216979 1216984 AAGAAGGCAGGATAA GAGTGCTTGT TGA ACATGCATTC TATTTTCTGCTTGAT PMM1263 1217886 - 1216960 - | ornithine carbamoyltransferase TERM 844 1217765 - 1217775 + g 82 -2.6 -5.93252 | ACTTTATTATGTAGA TTAA TAT TTAA TTTTTTATTTTTAAA ftsH3 1219777 - 1217915 - | cell division protein FtsH3 ribD 1220980 - 1219892 - | putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 845 1220636 - 1220657 + g 81 -10.2 -3.08679 | TAATTTAATACCTTT TCCCGACA TTCTTT TGTCGGGA TCTTCAATAGAGACA TERM 846 1220804 - 1220820 + g 73 -8 -3.37935 | opp_overlap 1220803 ATTATTGAAAGCCAT TGCCTC TGCAT GAGGCA TTCCTGATTTTGAAT PMM1266 1221494 - 1220994 - | hypothetical protein PMM1267 1221831 - 1221469 - | hypothetical protein TERM 847 1222617 - 1222636 + Gr 72 -7.8 -3.51411 | CACAATTTGGGATAT TGGAGCAG GTTG CGGCTCCA TTGGTTTAGAAGCAT cobL 1221805 - 1223085 + | putative precorrin-6y methylase ppnK 1224001 - 1223093 - | inorganic polyphosphate/ATP-NAD kinase TERM 848 1223910 - 1223923 + g 91 -5.3 -5.75342 | opp_overlap 1223910 CTTACAACTTCATAA TTGGA TTTT TCCAA TTTTTTTTGAACGGA pheS 1225080 - 1224073 - | phenylalanyl-tRNA synthetase alpha chain TERM 849 1224990 - 1224964 - G 70 -7.4 -3.6761 | opp_overlap 1224962, overlap 1224941 1224962 TTTTCCTAACAAAGA GACTCTTAATTG GTC CAATTCAGAATC ACTTTTCGCATTTTT surE 1225148 - 1225957 + | survival protein SurE PMM1272 1226470 - 1225937 - | hypothetical protein ribF 1226538 - 1227461 + | putative riboflavin kinase/FAD synthase thiE 1227470 - 1228525 + | thiamine-phosphate pyrophosphorylase PMM1275 1228515 - 1228724 + | hypothetical protein PMM1276 1228837 - 1229004 + | hypothetical protein PMM1277 1229071 - 1229205 + | hypothetical protein PMM1278 1229865 - 1229209 - | putative circadian phase modifier CpmA-like protein PMM1279 1230308 - 1229862 - | hypothetical protein PMM1280 1231528 - 1230305 - | putative bifuntional enzyme: tRNA methyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase era 1232440 - 1231529 - | GTP-binding protein Era PMM1282 1232480 - 1233007 + | hypothetical protein TERM 850 1233012 - 1233029 + T 95 -9.9 -4.2349 | opp_overlap 1233012 TTGCAAAGTAAAAAA GCGTAGA TAGT TCTACGC TTTTAGATATAAAAA TERM 851 1233029 - 1233012 - T 100 -9.9 -5.37593 | opp_overlap 1233012 TTGCAAAGTAAAAAA GCGTAGA TAGT TCTACGC TTTTAGATATAAAAA PMM1283 1233800 - 1233063 - | integral membrane protein, interacts with FtsH phoH,psiH 1234831 - 1233875 - | PhoH-like phosphate starvation-inducible protein TERM 852 1234308 - 1234324 + g 80 -9.4 -3.38991 | overlap 1234306 AAACCTAAATTCTCA CCAGCC TCTAC GGCTGG TCTTGTTAAAACAAT TERM 853 1234327 - 1234338 + g 74 -3 -5.32608 | CCTCTACGGCTGGTC TTGT TAAA ACAA TTTTTTCAATTTTTT rpsP 1235210 - 1234866 - | 30S ribosomal protein S16 ffh 1236761 - 1235265 - | signal recognition particle protein (SRP54) PMM1287 1238919 - 1236811 - | hypothetical protein TERM 854 1238483 - 1238505 + g 93 -11.4 -3.66288 | opp_overlap 1238472 1238489 AAATCTGCAGCATTT GAGTAAGATC TTT GATCTTGCTC TTGTATTGCAGCATC pdhA 1239069 - 1240106 + | pyruvate dehydrogenase E1 alpha subunit PMM1289 1241049 - 1240108 - | type II alternative sigma-70 family RNA polymerase sigma factor TERM 855 1241034 - 1241048 + g 70 -4.2 -5.10497 | overlap 1241036 GTTCAGTTGATGTTG TTGCTG ATG CAGCCA TTTTTTACCTAGATT PMM1290 1242755 - 1241190 - | hypothetical protein TERM 856 1242394 - 1242410 + g 70 -7.3 -3.57406 | overlap 1242392 TCTTTCCCTTCAGGA TTGGGAG AAT CTCCTAA TATTTCTACTCCAAG TERM 857 1242885 - 1242867 - g 71 -3.2 -5.25805 | opp_overlap 1242867 AATAAATCTAAAAAA CAACAA AAAATAA TTGTTG GTCTTTCAGGTGGAG trmU 1242801 - 1243973 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase PMM1292 1245437 - 1243947 - | putative apolipoprotein n-acyltransferase TERM 858 1244021 - 1244010 - G 74 -7.2 -4.14147 | opp_overlap 1244009 1244010, overlap 1244004 ACATAATAAGAACAA GGGG CGTT CCCC ATATGTTGTATAGAA PMM1293 1245526 - 1246098 + | FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) PMM1294 1246173 - 1246643 + | putative nickel-containing superoxide dismutase precursor (NISOD) TERM 859 1246728 - 1246760 + F 100 -12.1 -5.75945 | opp_overlap 1246731 CCGTCAAAGGTCAAT CCATGTTGCCTACTT TAA AAGAAGGTGACATGG TTTTTTTTAAAAAAT PMM1295 1246730 - 1246996 + | putative signal peptidase TERM 860 1247033 - 1246989 - T 76 -2.3 -5.85011 | overlap 1246991 CAAAAATTAAAAAAA TATTCTAGGTCAAAAATAG AGAAGTA CTTTTTTGGACCCAAAACA AACCCATAGAAAAAG PMM1296 1247661 - 1246993 - | hypothetical protein trpC 1248603 - 1247716 - | indole-3-glycerol-phosphate synthase TERM 861 1248180 - 1248164 - G 75 -5.1 -5.05116 | overlap 1248165 GCAGAAATAATAAAA TCTTTGC AGA GCAAAGG CAGATTAGTTGCTGT TERM 862 1248179 - 1248165 - G 77 -8.6 -3.61443 | overlap 1248164 CAGAAATAATAAAAT CTTTGC AGA GCAAAG GCAGATTAGTTGCTG lpdA 1250055 - 1248616 - | dihydrolipoamide dehydrogenase spoU 1250792 - 1250052 - | tRNA/rRNA methyltransferase (SpoU) murA 1251103 - 1252476 + | UDP-N-glucosamine 1-carboxyvinyltransferase TERM 863 1253322 - 1253332 + G 77 -3.2 -5.626 | opp_overlap 1253314 AACTAAACAGAGTTG CGCT GAA AGTG TTTTTTTCTGCAATA TERM 864 1253516 - 1253506 - g 74 -5.4 -4.81083 | opp_overlap 1253509 1253510, overlap 1253499 CCTAAGTACCAAAAA GGTT TTG AACC AATGGTTAAAGGTTT TERM 865 1253719 - 1253677 - g 70 -7.3 -3.62491 | opp_overlap 1253677 1253680 1253691, overlap 1253680 AAAAAATTTTTTAAA GAATTAAGAGAAATTTGTA ATAAA TACAATTCTCTTTTAATTC TTGATGAAGTTCAGA argD 1253002 - 1254255 + | acetylornithine aminotransferase folC 1254268 - 1255500 + | putative bifunctional dihydrofolate/folylpolyglutamate synthase PMM1303 1256852 - 1255497 - | FAD/FMN-containing dehydrogenase TERM 866 1256522 - 1256512 - G 78 -6.8 -4.38712 | TGTACCTTTACAAAA CCTG TCT CAGG ATGAAATTCTTCAAT TERM 867 1256852 - 1256862 + g 72 -2.6 -5.37593 | opp_overlap 1256852 AATTTCTTGAAGACA TTAA TAA TTAA TTTTTTACTTTAAAC codA 1258126 - 1256891 - | putative cytosine deaminase TERM 868 1257642 - 1257632 - G 74 -6.8 -4.15565 | opp_overlap 1257638 GGGAGTATCCCAAAA CTCC AAT GGAG CTAATGCTACATATT PMM1305 1258409 - 1259803 + | 2-methylthioadenine synthetase TERM 869 1259824 - 1259804 - f 74 -8.5 -3.46659 | CAGATTTATAAGTAA TTTTTCTAA ATG TTAGAAAAA GAAAAAAAATGTATT ddlA 1259813 - 1260880 + | D-alanine--D-alanine ligase PMM1307 1260892 - 1261302 + | hypothetical protein PMM1308 1261299 - 1262024 + | hypothetical protein TERM 870 1262141 - 1262121 - f 75 -9.1 -3.20236 | overlap 1262114 1262109 CAAGTTAATATTTAA GGACTTTCT TCA AGAAAATCC TACATATCAGCTTAG ftsZ 1262202 - 1263317 + | cell division protein FtsZ TERM 871 1264209 - 1264196 - g 79 -2.5 -5.81412 | TTGATGGAAAAAAAA TTTTT GGTG AAAAA CTAAAAGAATGGGTA panB 1263472 - 1264245 + | putative ketopantoate hydroxymethyltransferase PMM1311 1265464 - 1264238 - | putative oxygen-independent coproporphyrinogen III oxidase PMM1312 1265560 - 1266669 + | PIN domain superfamily protein clpP4 1266710 - 1267372 + | ATP-dependent Clp protease-like protein clpP 1267406 - 1268011 + | ATP-dependent Clp protease proteolytic subunit ilvC 1268128 - 1269117 + | ketol-acid reductoisomerase cobD 1269105 - 1270118 + | putative cobalamin biosynthetic protein hli13 1270176 - 1270442 + | high light inducible protein PMM1318 1270939 - 1270652 - | hypothetical protein PMM1319 1271214 - 1270969 - | beta-lactamase PMM1320 1271598 - 1271269 - | hypothetical protein TERM 872 1271695 - 1271677 - R 100 -8.9 -6.06723 | opp_overlap 1271677 TTCTTTAAAAAAAAA GGTGTTC AAAAA GAACACC TATATTAAAGACAAA TERM 873 1271677 - 1271695 + r 74 -8.9 -3.06696 | opp_overlap 1271677 TTCTTTAAAAAAAAA GGTGTTC AAAAA GAACACC TATATTAAAGACAAA PMM1321 1272002 - 1271727 - | histone-like DNA-binding protein glgX 1272635 - 1274668 + | putative isoamylase TERM 874 1274697 - 1274717 + F 79 -8.3 -4.11216 | GAATCGAACCCGCAT CTTCAGCTT GGA AGGCTGAGG TTTTACCACTAAACC TERM 875 1274892 - 1274906 + G 74 -4.2 -5.18355 | GGCACAGGTCTAGCC GCCACA CAA TTTGGC TTTTTCCTTTTTAGA PMM1323 1274850 - 1276199 + | GPH family sugar transporter PMM1324 1276209 - 1276964 + | putative transporter, membrane component TERM 876 1277101 - 1277112 + G 84 -2.2 -6.15536 | CCCACCATAGTATTT GCTG CATT TAGC TTTTTTTTATTGCTT PMM1325 1276969 - 1277373 + | hypothetical protein TERM 877 1277624 - 1277607 - g 86 -4.2 -5.78622 | TTATTTCAAAAAAAA TCTCTT TAGTTC AAGAGA TAAAAGATTTAGAAA PMM1326 1277408 - 1278418 + | hypothetical protein PMM1327 1278424 - 1279020 + | hypothetical protein pyrF 1279729 - 1279010 - | orotidine 5'-phosphate decarboxylase tyrS 1280974 - 1279736 - | tyrosyl-tRNA synthetase TERM 878 1279939 - 1279928 - G 85 -3 -6.08342 | TAACAAATAAAAAAA TTTC ACAG GAAA CACAATTTCTTTTAA PMM1330 1281319 - 1280996 - | hypothetical protein TERM 879 1281945 - 1281928 - g 74 -7.1 -3.97043 | opp_overlap 1281926 GCTAACATATAACAA TCTAACT AATC AGTTAGA TATACGTTTTTTTTT PMM1331 1281470 - 1282081 + | hypothetical protein TERM 880 1282481 - 1282451 - g 74 -7 -4.3255 | TTGGGAATTAATAAA TTCTCCAGAAGA AATTCAA TCTTTTGGAGAA TCAGCAAGATTATCA TERM 881 1282585 - 1282560 - g 74 -7.9 -3.90298 | CTTAACGAAATAGAA TTTTTAAATTT AAAT AAATTTAAAAA TATAAACTTCAATGA PMM1332 1282104 - 1283579 + | leucyl aminopeptidase PMM1333 1284194 - 1283592 - | peptide methionine sulfoxide reductase lpxB 1285389 - 1284211 - | lipid-A-disaccharide synthase TERM 882 1284299 - 1284309 + g 70 -4 -5.04325 | TCCGCATAACCTTTT GAAA TTT TTTC TTTTTCTGATTTGCG TERM 883 1284826 - 1284840 + g 72 -3.6 -5.14965 | TGCTCTAAGCTTAAG GATTTT TCT AGAATC TTTTTTGGTAGGAAT lpxA 1286228 - 1285386 - | UDP-N-acetylglucosamine acyltransferase fabZ 1286679 - 1286221 - | (3R)-hydroxymyristoyl-ACP dehydratase TERM 884 1286421 - 1286406 - G 71 -3.2 -5.19879 | overlap 1286408 CTGCAAATACAAAAA GTCCTT TGGG AAGGTC AGGCATTTGAGTTAC lpxC 1287533 - 1286697 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 885 1287416 - 1287430 + g 74 -2.9 -5.40014 | CATAAAAACCCTCTT TTTCA AACGG TGAAA TTTTTATTCTTGTTT TERM 886 1287504 - 1287461 - G 89 -11.8 -3.23216 | opp_overlap 1287457, overlap 1287462 1287485 TTTCACCACTATGAA GTCCTACACCCTCTTTGGTG ATAA CACCAGAGAGGGTGTAACAG GAATCATAATTAGAA TERM 887 1287503 - 1287462 - G 100 -15.3 -2.53715 | opp_overlap 1287457, overlap 1287461 1287485 TTCACCACTATGAAG TCCTACACCCTCTTTGGTG ATAA CACCAGAGAGGGTGTAACA GGAATCATAATTAGA PMM1338 1289675 - 1287534 - | chloroplast outer envelope membrane protein purC 1290442 - 1289714 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 888 1290756 - 1290740 - g 71 -2.3 -5.33985 | opp_overlap 1290740 TTCAAAAAAAATAAA TAAATCT GAG AGAATTA ATTTAGATTTAAAGA purD 1290576 - 1291913 + | phosphoribosylglycinamide synthetase TERM 889 1291999 - 1291983 - g 72 -8.7 -3.15073 | overlap 1291982 ATTGATGAAAATAAT CCTGACC ACT GGTCAAG CAGAGTTTTAACTTG nblS 1291914 - 1293983 + | two-component sensor histidine kinase kaiC 1295509 - 1293980 - | circadian clock protein KaiC kaiB 1295895 - 1295572 - | circadian clock protein KaiB rplU 1296041 - 1296481 + | 50S ribosomal protein L21 rpmA 1296491 - 1296751 + | 50S ribosomal protein L27 PMM1346 1297419 - 1296748 - | hypothetical protein TERM 890 1296839 - 1296829 - G 70 -4 -5.04385 | opp_overlap 1296829 TAGAGTCTTAAAAAA TTGT TCA ACAA TTTGCTCATCATCAA TERM 891 1298068 - 1298080 + G 71 -7.7 -3.50572 | AAATAAAAGTGTCTT GTTCC TCA GGAAC TTATATAAGATCCAT TERM 892 1298395 - 1298379 - g 77 -4.5 -5.31275 | overlap 1298380 TTTGATTACAAAAAA CCAATAA AAA TTATTGA CCCTAACAAAATCCT TERM 893 1298417 - 1298407 - g 71 -5.4 -4.65916 | opp_overlap 1298407 1298408, overlap 1298408 TTGACCCTAACAAAA TCCT ATT AGGA ATTGGTTTTATTAAT truB 1297563 - 1298480 + | putative tRNA pseudouridine 55 synthase spoIID 1299678 - 1298485 - | sporulation protein SpoIID TERM 894 1298875 - 1298889 + g 95 -4.3 -6.15259 | GAATAATTTTTGTAA TTCTC CGCTT GAGAA TTTTTTTTTCCATTG TERM 895 1299741 - 1299725 - H 72 -8.1 -3.15324 | opp_overlap 1299716 1299725, overlap 1299724 TAGTTTGACTAAAAG TCTAGAT TAA ATCTAGA TATTAAAATAAAAAT TERM 896 1299725 - 1299741 + H 71 -8.1 -3.05963 | opp_overlap 1299725 1299724, overlap 1299716 TAGTTTGACTAAAAG TCTAGAT TAA ATCTAGA TATTAAAATAAAAAT TERM 897 1300400 - 1300413 + G 71 -5.3 -4.58395 | TGAAAGTTTTGTTTA CTGTA CTGA TACAG TTTTTAGCAAATCGG PMM1349 1299765 - 1300703 + | hypothetical protein TERM 898 1300958 - 1300934 - g 93 -10.1 -4.29738 | opp_overlap 1300939 GTAGATGGATTAAAA GAAGATCTTCA TGG TGCAGATCTTC AAAATAATGAATATG PMM1350 1300763 - 1301341 + | pentapeptide repeat-containing protein TERM 899 1301357 - 1301347 - T 70 -2.6 -5.51165 | opp_overlap 1301347, overlap 1301338 AAAAGCTTAAAAAAA TATT TTA AATA CTTTCTGGCAACACA TERM 900 1301376 - 1301395 + T 100 -10 -5.21709 | opp_overlap 1301376, overlap 1301362 1301361 TCTGGCAACACATTA CCAGGTTC TTTT GAGCCTGG TTTTTTGCTGTACCA PMM1351 1301716 - 1301351 - | hypothetical protein petF 1302097 - 1301798 - | ferredoxin prmA 1303143 - 1302241 - | putative methyltransferase for ribosomal protein L11 serA 1304746 - 1303160 - | D-3-phosphoglycerate dehydrogenase TERM 901 1304060 - 1304081 + g 78 -2.3 -5.89827 | AATTATTCCCCCACG TGCACAGTT TATT AATTTTGCA TTTTTTTTCATACTT TERM 902 1304249 - 1304237 - G 74 -6.3 -4.49556 | TTCTGAGGAAACAAA TGGAT CAT ATCCA TAAACATCCATTTCA TERM 903 1304747 - 1304765 + H 86 -5.4 -5.72207 | TAAAACTTTTGTCAT TTAAAGAG TTG TTCTTTAA TTTTTTTACTTTAAC PMM1355 1304849 - 1305415 + | hypothetical protein TERM 904 1305574 - 1305589 + G 88 -3.4 -5.93252 | opp_overlap 1305574 GAAAGAATTTGAAAA TTTAAA TGAT TTTAAA TTTTTTGTTTTTGGA PMM1356 1305416 - 1306207 + | hypothetical protein PMM1357 1306399 - 1307022 + | steroid 5-alpha reductase C-terminal domain-containing protein TERM 905 1307082 - 1307066 - g 100 -7.3 -5.60993 | GCTGCGAGAAAAAAA GAAGGTA AAT TACCCTC AAGTAGGTGGTTTCA PMM1358 1307009 - 1307560 + | hypothetical protein PMM1359 1308360 - 1307800 - | hypothetical protein PMM1360 1309654 - 1308515 - | DNA photolyase TERM 906 1308978 - 1308992 + g 84 -3.6 -5.7946 | TTATAAATCTCATCA TCAAGT GGG ATTTGA TTTTTTTCTTCAAGA TERM 907 1309599 - 1309569 - G 77 -9.3 -3.29144 | gap 1, opp_overlap 1309569, overlap 1309575 TTAGTTGGGCCATAA TCA-AAACTACGAA GTTT TTCGTAGTTTGTGA TTTTATTCTCTAAAA TERM 908 1309569 - 1309599 + g 93 -9.3 -4.84311 | gap 1, opp_overlap 1309569 1309575 TTAGTTGGGCCATAA TCA-AAACTACGAA GTTT TTCGTAGTTTGTGA TTTTATTCTCTAAAA TERM 909 1309592 - 1309575 - G 88 -8.5 -4.48987 | opp_overlap 1309569, overlap 1309569 GGGCCATAATCAAAA CTACGAA GTTT TTCGTAG TTTGTGATTTTATTC TERM 910 1310290 - 1310263 - g 74 -6.5 -4.44797 | CTATTAACACTAAAA TTTCTTCCTTT AATTGA AAAGAAAGAAA ACTCTAGAATAGTAA PMM1361 1309840 - 1310769 + | short-chain dehydrogenase/reductase PMM1362 1311030 - 1310764 - | hypothetical protein TERM 911 1311269 - 1311279 + r 78 -5.4 -5.10656 | opp_overlap 1311267 1311269 GCTATAAGAGTAATA CTTC TGT GAAG TTTTCTTGTTTTAGT PMM1363 1311566 - 1311303 - | hypothetical protein TERM 912 1312636 - 1312620 - g 70 -7.3 -3.62054 | opp_overlap 1312620 ACTTGAAATAATTAA TGATAGC AAG GCTACCA ATTTTGACTCTTCCG murD 1311601 - 1313022 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase PMM1365 1313124 - 1313438 + | MATH domain-containing protein PMM1366 1314173 - 1313442 - | hypothetical protein PMM1367 1314998 - 1314462 - | hypothetical protein TERM 913 1314594 - 1314613 + g 71 -2.2 -5.4477 | overlap 1314590 1314597 AAATTTATCTTTTTT TATTGAAT AAAA ATTCATTA TTTTTTTAGAAATTT TERM 914 1314909 - 1314920 + g 81 -3 -5.77856 | TGGATTTAAACCTAT GAAA ATTA TTTC TTTTTTTGATTTATT TERM 915 1314990 - 1315003 + g 70 -3.9 -5.03314 | ACTTATTAAACAACT TCTTT CCAT AAAGA TTTTTTCAACCTAGA PMM1368 1315494 - 1315009 - | hypothetical protein TERM 916 1315224 - 1315237 + g 71 -5.3 -4.60797 | ACAGAGATACTTTAA TCCAA AAAA TTGGA TTTTCTGTATAAAAA PMM1369 1316334 - 1315582 - | GAF domain-containing protein TERM 917 1315873 - 1315862 - G 73 -4.4 -5.09426 | opp_overlap 1315862 CTTAACTCCAAAAAA GCAA CTAT TTGC TTAGATAATAATTCC PMM1370 1317664 - 1316420 - | hypothetical protein PMM1371 1318653 - 1319528 + | hypothetical protein TERM 918 1319678 - 1319698 + F 73 -7.7 -3.73302 | TCATGCCTATATGCC GGATTTATA GGT TATAAGTCC TTATTAAATATATTA PMM1372 1319979 - 1320257 + | hypothetical protein TERM 919 1321491 - 1321504 + F 73 -2.5 -5.79595 | AATAGAAATTACCTA TTAAT TTAG ATTAA TTTTTTATTTTGACA PMM1373 1321972 - 1322307 + | hypothetical protein TERM 920 1322546 - 1322583 + T 72 -8.7 -2.56944 | opp_overlap 1322554, overlap 1322549 1322554 TTCATTAACCCGTAC TAAAAAAAGAAAGCGTT TAAA AAAGCTTTCTTTTATTA ACTTATTTTCTTATT TERM 921 1322575 - 1322554 - T 85 -5.9 -5.52384 | opp_overlap 1322554 1322549 1322546 CCCGTACTAAAAAAA GAAAGCGTT TAAA AAAGCTTTC TTTTATTAACTTATT TERM 922 1322554 - 1322575 + T 76 -5.9 -4.74539 | opp_overlap 1322554, overlap 1322549 1322546 CCCGTACTAAAAAAA GAAAGCGTT TAAA AAAGCTTTC TTTTATTAACTTATT PMM1374 1322939 - 1322610 - | Type I restriction modification DNA s TERM 923 1323333 - 1323320 - g 95 -3.9 -6.12458 | CAAAAAAAGAAAAAA TCTTT ATTA AAAGA AAAGCAAGAATTAAA PMM1375 1323170 - 1323391 + | M protein-like TERM 924 1323716 - 1323706 - f 70 -2.6 -5.4659 | CAAGACAAATAAAAA TAAA CAG TTTA ACTAGAATTCAAATC rbpD 1323841 - 1324119 + | RNA-binding protein RbpD TERM 925 1324269 - 1324257 - f 72 -4.9 -5.06089 | opp_overlap 1324265, overlap 1324265 AAAGTAGAAATAAAA CAAAA TTA TTTTG GAAAAAGTTTTAGTT PMM1377 1324267 - 1325262 + | dihydroflavonol-4-reductase TERM 926 1325834 - 1325823 - g 74 -3 -5.34632 | AATAAAAGAGAAAAA CTTA TTTA TAAG GTAAGTAGACATTGG des,yocE 1325388 - 1326494 + | Fatty acid desaturase, type 2 TERM 927 1326734 - 1326691 - f 82 -10 -2.95919 | opp_overlap 1326700, overlap 1326690 1326700 ATCATCTAACGAAAT TTTTAAAAAGTAAATCAG TCTTTATG CTGATTTACTTTTTAATA TCATTAGAAGGAATA TERM 928 1326725 - 1326700 - f 74 -6.3 -4.64657 | opp_overlap 1326700, overlap 1326691 1326690 CGAAATTTTTAAAAA GTAAATCAG TCTTTATG CTGATTTAC TTTTTAATATCATTA TERM 929 1326700 - 1326725 + F 81 -7 -4.84274 | opp_overlap 1326691 1326690 1326700 CGAAATTTTTAAAAA GTAAATCAGT CTTTAT GCTGATTTAC TTTTTAATATCATTA TERM 930 1328424 - 1328412 - g 71 -7.7 -3.38603 | overlap 1328410 AAAGATTTTTAAATA TGCTG ATA CAGCA TCAGAAGCATGGGAA PMM1379 1327594 - 1328478 + | putative dape gene and orf2 TERM 931 1329636 - 1329626 - g 71 -5.4 -4.58773 | CTCACTAAAGCAAAA CCTT TTA AAGG TGCAATAGAATTAAT PMM1380 1329368 - 1330045 + | hypothetical protein TERM 932 1330656 - 1330645 - g 72 -5.8 -4.45544 | opp_overlap 1330644, overlap 1330654 GCGCATGAATTAAAA GGGT TAAT ACCC ATAATGTTGGGATGG PMM1381 1330099 - 1330737 + | hypothetical protein PMM1382 1331162 - 1332340 + | fatty acid desaturase, type 2 PMM1383 1333374 - 1332751 - | hypothetical protein TERM 933 1333610 - 1333599 - H 76 -4.4 -5.30616 | opp_overlap 1333553 1333599 TTACTTAAATAAAAA GAGT ATTT ACTC TAGTATTCAAGAATA TERM 934 1333806 - 1333765 - H 95 -10.3 -4.07687 | opp_overlap 1333771, overlap 1333751 1333771 ATCTTTTTTTTAAAA TAAAAAGAGTCGGCCTGTA TCCC TACTAGCCAACTCTTGTTA ATAATATTAGTTAAA TERM 935 1333800 - 1333771 - H 100 -9.3 -5.45802 | opp_overlap 1333771, overlap 1333751 1333765 TTTTTAAAATAAAAA GAGTCGGCCTGTA TCCC TACTAGCCAACTC TTGTTAATAATATTA hli12 1334613 - 1334720 + | high light inducible protein hli11 1334720 - 1334860 + | high light inducible protein TERM 936 1334885 - 1334907 + F 100 -5.6 -6.34616 | opp_overlap 1334885 AATAAATTTTATAAG CCAGATTG CCAAACT CGATCTGG TTTTTTTTATTTTAA TERM 937 1336499 - 1336528 + F 93 -7.9 -5.25735 | ACTTTATCGTCATGA GAGTTTGCTAGTA GGGA TGCGAGCAAGCTC TTTTTAATTTTTTGC PMM1386 1337265 - 1338467 + | putative permease PMM1387 1338998 - 1339198 + | hypothetical protein PMM1388 1339802 - 1339254 - | hypothetical protein TERM 938 1339400 - 1339418 + g 85 -3.2 -6.09133 | TAAAATCTTTAACAG CATAAATA TCA TCTTTATG TTTTTTTTTGCAGTC TERM 939 1339449 - 1339499 + g 73 -7.8 -3.66615 | gap 1, overlap 1339445 AATTAGCCATTTCGA TTTGGCCTTATTATTGGCCTCTG AAGGAC TAGAGGCTAC-AACAAGGCCAAA TTCATGTTTTTCTTG TERM 940 1339567 - 1339577 + g 84 -5.4 -5.46629 | CATAATTTTTTTTTG GAGA TTT TCTC TTTTTTTAAAATCTT PMM1389 1339931 - 1340563 + | trypsin TERM 941 1341010 - 1341038 + T 81 -7.5 -4.50241 | opp_overlap 1341016, overlap 1341015 1341016 AAAAATATAAAAACT AAAAAAGGAGCTT ATA AAGCTCCCTTTTA TTTTAATTAATGTTT TERM 942 1341015 - 1341033 + T 87 -7.4 -5.18643 | opp_overlap 1341016, overlap 1341010 1341016 TATAAAAACTAAAAA AGGAGCTT ATA AAGCTCCC TTTTATTTTAATTAA TERM 943 1341032 - 1341016 - T 100 -10.9 -5.56112 | opp_overlap 1341015 1341010 1341016 ATAAAAACTAAAAAA GGAGCTT ATA AAGCTCC CTTTTATTTTAATTA TERM 944 1341016 - 1341032 + T 95 -10.9 -3.69559 | opp_overlap 1341016, overlap 1341015 1341010 ATAAAAACTAAAAAA GGAGCTT ATA AAGCTCC CTTTTATTTTAATTA hli10 1341185 - 1341057 - | high light inducible protein PMM1391 1341464 - 1341688 + | CopG family protein PMM1392 1341783 - 1342076 + | heat-labile enterotoxin alpha chain PMM1393 1342618 - 1342139 - | carbon storage regulator PMM1394 1343227 - 1343490 + | hypothetical protein PMM1395 1344420 - 1344028 - | hypothetical protein TERM 945 1344542 - 1344522 - R 100 -7.6 -5.89827 | AATTATTAAAAAAAA CAACTCCC AAGAA GAGAGTTG AATTTCTAACGTCGG TERM 946 1344638 - 1344602 - R 70 -7.6 -3.43848 | gap 1, opp_overlap 1344607, overlap 1344607 AGAGACTTAACAATA TAAAAGCTTGCTTAATA TCCC TA-TAAGCAAGCTCTCA TGACGATTTAATTTT TERM 947 1344633 - 1344607 - R 86 -7.5 -4.79752 | gap 1, opp_overlap 1344607, overlap 1344602 CTTAACAATATAAAA GCTTGCTTAATA TCCC TA-TAAGCAAGC TCTCATGACGATTTA hli9 1345067 - 1344939 - | high light inducible protein hli8 1345358 - 1345098 - | high light inducible protein hli7 1345567 - 1345358 - | high light inducible protein hli6 1345674 - 1345567 - | high light inducible protein PMM1400 1346626 - 1346108 - | hemagglutinin-neuraminidase PMM1401 1347131 - 1347412 + | hypothetical protein PMM1402 1347829 - 1348188 + | hypothetical protein TERM 948 1348370 - 1348392 + T 83 -7.7 -4.59982 | opp_overlap 1348375, overlap 1348373 TGAGGTGCATGACTT GAAGAGGGC GACAA GCCCTCTTA TTTATTTACTTATGA TERM 949 1348373 - 1348389 + T 93 -9.4 -4.38369 | opp_overlap 1348375, overlap 1348370 GGTGCATGACTTGAA GAGGGC GACAA GCCCTC TTATTTATTTACTTA PMM1403 1349756 - 1349355 - | HNH endonuclease:HNH nuclease TERM 950 1350078 - 1350049 - R 100 -10.1 -4.73388 | AATCTGCATTAAAAA GTGCTTGCCAGTA TCAC TATTGGCAAACAC TCATGACGATGTTTT hli5 1350368 - 1350213 - | high light inducible protein PMM1405 1350987 - 1350757 - | hypothetical protein PMM1406 1351515 - 1351144 - | hypothetical protein PMM1407 1351803 - 1351516 - | SRP19 protein PMM1408 1352031 - 1351804 - | hypothetical protein TERM 951 1352061 - 1352046 - R 76 -6.1 -4.8384 | opp_overlap 1352046 1352047 1352060, overlap 1352039 1352048 TAAATAATGTAAAAA GAGGG TTTTAC CCCTC TAATATAGATTAACT PMM1409 1352411 - 1352091 - | rubredoxin PMM1410 1353047 - 1352535 - | PTS system, lactose/cellobiose specif TERM 952 1353530 - 1353546 + H 70 -5.2 -4.7908 | TCAAATTTCATTTCT GCAATT TCAAC AATTGC TTTATTTATATTTTT TERM 953 1353597 - 1353615 + H 73 -2.4 -5.7827 | overlap 1353598 1353601 TTTTTGGGGTTTTGG TTGATTCC ATC GGAATTAC TTTTTTCTTTATATT PMM1411 1354030 - 1354287 + | hypothetical protein TERM 954 1354499 - 1354513 + F 71 -7.2 -3.93583 | opp_overlap 1354498 1354499 ATAAATAATTAAAAC TAGGTA CTT TACCTA TTTCTGGATGACTTC PMM1412 1354682 - 1355110 + | hypothetical protein TERM 955 1355159 - 1355173 + F 95 -7.1 -5.96219 | opp_overlap 1355159 GTCAAACTATAATGA GGAGC AATTA GCTCC TTTTTTTTATGACTG PMM1413 1355182 - 1355490 + | hypothetical protein PMM1414 1355592 - 1355930 + | hypothetical protein TERM 956 1356640 - 1356626 - g 80 -5.8 -5.1167 | overlap 1356620 AATCTAATATAAAAA CTTTAA TAA TTAAAG GTGAGGACAGCCATT PMM1415 1355995 - 1356975 + | UBX domain-containing protein TERM 957 1357754 - 1357742 - g 72 -4.9 -4.74012 | overlap 1357737 ATTACAAAATGAAAA GAAAA CTC TTTTC TGCGATATTAACAGG TERM 958 1359424 - 1359409 - g 73 -7.6 -3.76224 | opp_overlap 1359409 GTCCTACCCATCAAA GAGTCA GATA TGACTC TTAGTGAACCGAACA PMM1416 1357735 - 1359819 + | hypothetical protein TERM 959 1359898 - 1359862 - f 93 -11.1 -3.32963 | opp_overlap 1359852 1359864, overlap 1359864 1359872 ATTGCGACTTTATAA GACCTATAAACTCATTA ATT TAGTGAGTTTATAGGTT TTTTATATTTCAAAC TERM 960 1359896 - 1359864 - f 100 -13.7 -3.23393 | opp_overlap 1359852 1359864, overlap 1359862 1359872 TGCGACTTTATAAGA CCTATAAACTCATTA ATT TAGTGAGTTTATAGG TTTTTTATATTTCAA TERM 961 1359864 - 1359896 + F 100 -15.9 -5.56264 | opp_overlap 1359864 1359862 1359872, overlap 1359852 TGCGACTTTATAAGA CCTATAAACTCATTA ATT TAGTGAGTTTATAGG TTTTTTATATTTCAA PMM1417 1360407 - 1360814 + | hypothetical protein PMM1418 1361026 - 1361424 + | voltage gated chloride channel PMM1419 1361504 - 1361908 + | ATP synthase B/B' CF(0) PMM1420 1362519 - 1362259 - | fumarate reductase subunit D TERM 962 1362500 - 1362511 + g 71 -3 -5.1517 | TGTATTTTTCTTTTA TTTG ATTT CAAA TTTTTCATTTATTTT PMM1421 1362888 - 1362520 - | gibberellin regulated protein TERM 963 1362836 - 1362816 - G 82 -2.7 -6.04953 | AGAGAAATAAAAAAA TCAAAAATT TAA AATTTCTAA GAACAATATGCATTA PMM1422 1363390 - 1362872 - | hypothetical protein PMM1423 1363903 - 1363451 - | hypothetical protein PMM1424 1364150 - 1363908 - | hypothetical protein TERM 964 1365009 - 1365019 + H 70 -4 -5.25976 | ATAAAGCAGTAAATT TCTT AAA AAGA TTTGTTTTTTTCATT TERM 965 1366499 - 1366481 - g 76 -5.4 -5.09225 | ACCTGATCTAAAAAA TATAAATG AAT CATCTATA AATGAATGTGGAAAT PMM1425 1365186 - 1366526 + | serine protease PMM1426 1366747 - 1367064 + | hypothetical protein TERM 966 1367119 - 1367102 - f 70 -7.1 -3.66117 | overlap 1367100 CTAATGATATAAATA TTAGTAC ACTT GTACTAA CTAATCATGGAGGAC PMM1427 1367126 - 1367356 + | hypothetical protein PMM1428 1367679 - 1368140 + | hypothetical protein PMM1429 1368405 - 1368154 - | hypothetical protein PMM1430 1369092 - 1368721 - | hypothetical protein rpoZ 1369331 - 1369095 - | DNA-directed RNA polymerase subunit omega TERM 967 1369813 - 1369797 - g 74 -6.5 -4.44284 | AATTTAACATTAAAA GGCTGGT TTT AACAGCC CCAATTGACACTTAT TERM 968 1370852 - 1370819 - g 82 -9.8 -3.69437 | opp_overlap 1370824, overlap 1370822 GAATCTCAAAATGAA GAAGAGGTTTTTAA ATGGAA TAAAAAACCTCTTC AAATAAATGTGAACA PMM1432 1369433 - 1370998 + | HSP70 family molecular chaperone PMM1433 1371537 - 1370995 - | pyrimidine regulatory protein PyrR TERM 969 1371828 - 1371784 - g 75 -8.2 -3.56959 | gap 1 AGAGAATTTAGATAA TGCCATAAAAAATGCCAATAC TCCT ATAATGG-ATTCTTTATGGCA CGCTTATCCTCATAC TERM 970 1373144 - 1373130 - g 75 -2.8 -5.54907 | GTGAGAAAAGAAAAA TTCCAA ATA TGGGAA ATGAGATTTATTTGA pgmI 1371677 - 1373299 + | phosphoglyceromutase secG 1373325 - 1373549 + | preprotein translocase subunit SecG TERM 971 1373596 - 1373615 + T 91 -10.8 -3.57263 | opp_overlap 1373596 TCAATAAATAAGAAA GGGATTGT CAAA ACAATCCC TTTAAAACTAAAAAT TERM 972 1373615 - 1373596 - T 100 -10.8 -4.67968 | opp_overlap 1373596 TCAATAAATAAGAAA GGGATTGT CAAA ACAATCCC TTTAAAACTAAAAAT groEL 1375274 - 1373640 - | chaperonin GroEL TERM 973 1373680 - 1373690 + g 74 -3.2 -5.36441 | overlap 1373677 1373667 CCTGGAGCTCCAGCA GGTG CTG CATC TTTTTTCTCTGGCAA TERM 974 1374089 - 1374101 + g 76 -3.4 -5.38249 | TTGCATTAATAGCAT CTTC TAAAC GAAG TTTTTTATCCTTCAT TERM 975 1375133 - 1375148 + g 72 -2.6 -5.36441 | gap 1, opp_overlap 1375133 CCCCATCATTAATGA TTTGAGG GGC CC-CAAA TTTTTTCTCTAAGAC groES 1375637 - 1375326 - | co-chaperonin GroES atpB 1375858 - 1377318 + | F0F1 ATP synthase subunit beta atpC 1377367 - 1377771 + | F0F1 ATP synthase subunit epsilon PMM1440 1378251 - 1377775 - | hypothetical protein TERM 976 1378317 - 1378301 - R 72 -8.1 -3.16742 | opp_overlap 1378291 1378298 GTTAATGGTCACTAA TTGATCA TTT TGATCAA AAATTCTTGCTTTTA PMM1441 1378518 - 1378360 - | hypothetical protein pepP 1379901 - 1378576 - | putative aminopeptidase P PMM1443 1379976 - 1380953 + | hypothetical protein PMM1444 1380956 - 1382197 + | hypothetical protein nadD 1382194 - 1382775 + | nicotinic acid mononucleotide adenylyltransferase TERM 977 1383600 - 1383614 + G 70 -4.3 -4.84363 | opp_overlap 1383586 ACGAAAAAATCTCTT CTGAA ATTTC TTCAG TTTTTGATGCTTTAG TERM 978 1383676 - 1383659 - g 76 -5.5 -5.06451 | opp_overlap 1383660, overlap 1383660 GACTATGCTAAAAAA TGCGGAT TTAG ATCCGCT TTAATTGGCCTAAGC TERM 979 1383675 - 1383660 - g 80 -9 -3.63148 | opp_overlap 1383660, overlap 1383659 ACTATGCTAAAAAAT GCGGAT TTAG ATCCGC TTTAATTGGCCTAAG TERM 980 1383660 - 1383675 + G 81 -9 -3.91911 | opp_overlap 1383660 1383659 ACTATGCTAAAAAAT GCGGAT TTAG ATCCGC TTTAATTGGCCTAAG TERM 981 1383831 - 1383814 - g 70 -7.1 -3.70331 | overlap 1383812 AATCGATGCAAAAGA TTTAGTC GCAA GACTAAA CATAAACTTAAATAC PMM1446 1382780 - 1384477 + | carbon-nitrogen hydrolase:NAD+ synthase PMM1447 1385541 - 1384483 - | hypothetical protein PMM1448 1385755 - 1385546 - | hypothetical protein petF 1386078 - 1385752 - | ferredoxin atpC 1387043 - 1386093 - | F0F1 ATP synthase subunit gamma atpA 1388581 - 1387064 - | F0F1 ATP synthase subunit alpha atpH,atpD 1389155 - 1388613 - | F0F1 ATP synthase subunit delta atpF 1389667 - 1389155 - | F0F1 ATP synthase subunit B TERM 982 1389339 - 1389355 + g 76 -3.7 -5.33866 | CTTTGTTTTATTCGT GCCAT CTCTTCA ATGGC TTTTTTCTCACTTTC atpG 1390125 - 1389664 - | F0F1 ATP synthase subunit B' TERM 983 1389885 - 1389915 + g 76 -6.2 -4.6902 | overlap 1389869 1389865 1389888 CTTCATAGCGAGCGC TTTGGAGCTGACTT AAT AAATCAGCTTCTAA TTTTTCAACTTCTGA PMM1455 1390439 - 1390194 - | F0F1 ATP synthase subunit C TERM 984 1390481 - 1390499 + r 70 -3.9 -5.20756 | TGTGATAAATCTTTT TGTCTAA CACGC TTGGACA TTCTTTTTTTTTTAA TERM 985 1390540 - 1390518 - R 83 -9.2 -3.61398 | TTTTTTTTTTAAGAA TGGGTCTGAA TTT TTCAGACCTA CGCGATTAAATATTT atpI 1391331 - 1390606 - | F0F1 ATP synthase subunit A TERM 986 1391379 - 1391349 - R 81 -5.7 -5.30616 | opp_overlap 1391353 1391357, overlap 1391353 TGATTTAAATAAAAA TTAATAAATTTTG AAAAG CAAAATTTATTTA AGAACGTGAGAAATA atp1 1391856 - 1391377 - | ATP synthase subunit 1 TERM 987 1391587 - 1391574 - G 77 -3.1 -5.67283 | AACGTAAATAAAAAA TACCA GCAA TGGCA CCTATAAAAACACTA TERM 988 1393046 - 1393065 + G 72 -5 -4.81752 | overlap 1393048 1393062 AATTTGGTTTATTAG GATCAACA TTAT TGTTGAGC TTTTTAGCTCTTTTT TERM 989 1393062 - 1393075 + G 100 -6.7 -5.60689 | overlap 1393048 1393046 ATCAACATTATTGTT GAGCT TTTT AGCTC TTTTTTCTTATATAA ftsW 1392124 - 1393353 + | cell division protein FtsW ccdA 1393437 - 1394093 + | putative c-type cytochrome biogenesis protein CcdA ycf44 1394094 - 1395380 + | putative c-type cytochrome biogenesis protein Ccs1 PMM1461 1395787 - 1395377 - | 7-cyano-7-deazaguanine reductase PMM1462 1395967 - 1396212 + | hypothetical protein glnB 1396237 - 1396575 + | nitrogen regulatory protein P-II TERM 990 1396564 - 1396587 + T 84 -9 -4.34771 | opp_overlap 1396564 1396567, overlap 1396568 GGAGATACCGATGAA GAAGCTCTTT GATT AAAGAGTTTC TTTTACTAAATTTTC TERM 991 1396568 - 1396583 + T 74 -6.2 -4.7261 | opp_overlap 1396567 1396564, overlap 1396564 ATACCGATGAAGAAG CTCTTT GATT AAAGAG TTTCTTTTACTAAAT TERM 992 1396591 - 1396615 + T 77 -7.4 -4.4846 | TTAAAGAGTTTCTTT TACTAAATTT TCTAT AAATTTAGTA TTTATTATTGGATTA PMM1464 1397388 - 1396576 - | rRNA methyltransferase TERM 993 1398191 - 1398181 - g 86 -4 -5.80248 | overlap 1398186 TAAGAGATAAAAAAA GATT ATT AATC CTTAAAGAATCTATT purB 1397682 - 1398977 + | adenylosuccinate lyase TERM 994 1399522 - 1399498 - g 71 -2.1 -5.4148 | opp_overlap 1399501 1399516, overlap 1399487 1399501 CAAATAATTAAAAAA TTAGTTCCATC AAT AAAGGAACTTA CTAAGGTTCTTGATA fumC 1399018 - 1400403 + | fumarate hydratase PMM1467 1403141 - 1400415 - | putative DNA helicase TERM 995 1400514 - 1400532 + g 72 -2.4 -5.46129 | overlap 1400509 TCTATTTATAGCTTT TAAGGCTA ACT TTGCTTTA TTTTTTAGTTTATTA bioF 1403281 - 1404426 + | putative 8-amino-7-oxononanoate synthase TERM 996 1404594 - 1404575 - g 71 -2.2 -5.35222 | overlap 1404578 AAAATGGATAAAAAA CAATTTGA ACGA TCAAATCA AGTTAATTTTATGTC PMM1469 1404423 - 1405139 + | hypothetical protein PMM1470 1405129 - 1405887 + | hypothetical protein BioD 1405884 - 1406546 + | putative dethiobiotin synthase TERM 997 1407284 - 1407269 - g 72 -3.4 -5.22794 | AGAAGTAGTAAAAAA TAATAA TTCT TTATTA ATAGCTGATGAAGTA BioA 1406550 - 1407851 + | putative diaminopelargonic acid synthase PMM1473 1408118 - 1407861 - | hypothetical protein PMM1474 1408582 - 1408136 - | DnaJ-like protein TERM 998 1408603 - 1408588 - H 70 -3.4 -5.40072 | CGCCTTTCAAAAAAA TTTAAT TATC ATTAAA AATATTCTAGTCATT gidB 1408674 - 1409393 + | putative glucose inhibited division protein B PMM1476 1410589 - 1409390 - | aldo/keto reductase PMM1477 1410961 - 1410596 - | hypothetical protein PMM1478 1411357 - 1410965 - | hypothetical protein PMM1479 1411559 - 1411344 - | hypothetical protein PMM1480 1412448 - 1411678 - | hypothetical protein PMM1481 1413710 - 1412664 - | putative Fe-S-cluster redox protein hli3 1413893 - 1413741 - | putative high light inducible protein rpoC2 1418043 - 1413943 - | DNA-directed RNA polymerase subunit beta' TERM 999 1417865 - 1417893 + g 82 -11.1 -2.71101 | overlap 1417862 GCAGCAGTAACGGCG GTTCCATGGGTTT TAT AAGCCCATGAAAC TAAATTCTTTAAAGC rpoC1 1419981 - 1418077 - | DNA-directed RNA polymerase subunit gamma TERM 1000 1418343 - 1418357 + g 72 -2.8 -5.32944 | opp_overlap 1418340 CAAAAATAACATCTT CTAATG AAG CATAAG TTTTTTGATTGTCAC TERM 1001 1418372 - 1418382 + g 76 -5.4 -5.12707 | GTTTTTTGATTGTCA CCAA AAT TTGG TTTTTTAAAGTTTGG TERM 1002 1419770 - 1419788 + g 73 -4.6 -5.00616 | overlap 1419772 CAGTGACATTCCCAG TCTTTGGA TGG TCCAAATA TTTTTTCACAAAAAA TERM 1003 1419772 - 1419786 + g 74 -7.2 -4.13561 | overlap 1419770 GTGACATTCCCAGTC TTTGGA TGG TCCAAA TATTTTTTCACAAAA rpoB 1423313 - 1420020 - | DNA-directed RNA polymerase subunit beta TERM 1004 1421998 - 1421978 - G 78 -9.8 -3.21126 | opp_overlap 1421977 1421976 AACCATATTCATTAA CTCTTGCA TGTGT TGCAAGAG AATTTATAAGACCTG PMM1486 1424346 - 1423552 - | TatD family deoxyribonuclease rpsT 1424646 - 1424353 - | 30S ribosomal protein S20 TERM 1005 1424870 - 1424858 - g 82 -4.9 -5.33131 | CAATAAAAAAATAAA TTCAA TTG TTGAA AATATTCTTCAAGAG hisD 1424769 - 1426055 + | histidinol dehydrogenase rpiA 1426747 - 1426052 - | ribose 5-phosphate isomerase PMM1490 1427955 - 1426813 - | trypsin-like serine protease TERM 1006 1428522 - 1428542 + G 71 -7.7 -3.46687 | opp_overlap 1428496 1428521 AGATTAAAAAAATTC CCTTTAATG AAG TATTAAAGG TTAGTCTTTGCACTT PMM1491 1428101 - 1428568 + | hypothetical protein TERM 1007 1429973 - 1429963 - g 74 -5.4 -4.82128 | overlap 1429970 CGACCAAACAGAAAA CTTG AAA CAAG AGGAACTATTGTCTA nusA 1428605 - 1430008 + | transcription elongation factor NusA TERM 1008 1430083 - 1430067 - g 71 -6.7 -4.03978 | opp_overlap 1430070, overlap 1430070 AACTTTTGATAGAAA TAATCTT TTG AAGATTA CTAATGATCATAAGT TERM 1009 1430198 - 1430187 - g 87 -4.4 -5.89947 | opp_overlap 1430187 1430197, overlap 1430197 TAAACTTAAAAAAAA GCTT CAAA AAGC TTTAAAAGGCATTTT PMM1493 1430005 - 1430265 + | hypothetical protein TERM 1010 1430697 - 1430664 - g 71 -6.9 -4.15222 | opp_overlap 1430666 ACCCCTTTTAATAAA GCCTACTAATAAAGT AGTG AATTCATTAGTAAGC TCAAATATTAAAAAT TERM 1011 1430929 - 1430917 - g 80 -6.3 -4.77896 | overlap 1430926 CAACTAATTGAAAAA CCAAA AAA TTTGG CAAATTCCAATAGGA TERM 1012 1430977 - 1430967 - g 70 -4 -4.96996 | CGCAAACAAAATAAA TAAC TCA GTTA ATCAAAAGGCTCAAT TERM 1013 1431560 - 1431529 - g 70 -7.3 -3.58905 | opp_overlap 1431517 ACTCCTTATAGACAA GGTGCTTCTGG GATTAGAAAG CCAGTAGCACC CAATGAACTGATGCA infB 1430338 - 1433847 + | translation initiation factor IF-2 PMM1495 1434091 - 1433852 - | hypothetical protein PMM1496 1434244 - 1435791 + | dolichyl-phosphate-mannose-protein mannosyltransferase PMM1497 1435827 - 1436918 + | glycosyl transferase family protein PMM1498 1437023 - 1438642 + | Fe-S oxidoreductase TERM 1014 1438669 - 1438685 + T 70 -5.2 -4.74504 | TTAATTTATTCGTAA GAAGAT AATTA ATCTTC TTTTTCAATTGAACT clpS 1439033 - 1438677 - | ATP-dependent Clp protease adaptor protein ClpS PMM1500 1440259 - 1439033 - | L,L-diaminopimelate aminotransferase TERM 1015 1439611 - 1439601 - G 71 -5.4 -4.63218 | TTGTCTTGAATAAAA GCTT CAT AAGC TGCATCGAAAAGAAT TERM 1016 1442238 - 1442206 - gH 82 -6.3 -5.11389 | overlap 1442209 AGAATACAAATAAAA TAACCTCAACTTTTG ATT CAAAAGAAGAGGTTG AAGCAGATTACTCTA TERM 1017 1442235 - 1442209 - gH 85 -8 -4.60302 | overlap 1442206 ATACAAATAAAATAA CCTCAACTTTTG ATT CAAAAGAAGAGG TTGAAGCAGATTACT PMM1501 1440558 - 1442375 + | ribonuclease E/G TERM 1018 1442536 - 1442522 - gT 81 -2.9 -5.81032 | opp_overlap 1442532 TAACTCCAAAAAAAA GAAAA GATTT TTTTC CTAAAATTATTGCAT PMM1502 1442320 - 1442949 + | ribonuclease HII and HIII PMM1503 1443453 - 1442935 - | hypothetical protein pheA 1443506 - 1444351 + | chorismate mutase-prephenate dehydratase PMM1505 1445287 - 1444352 - | SAM-binding motif-containing protein PMM1506 1445944 - 1445288 - | ATP-dependent protease La rpsJ 1446320 - 1446000 - | 30S ribosomal protein S10 tuf 1447629 - 1446430 - | elongation factor Tu fusA 1449748 - 1447673 - | elongation factor G TERM 1019 1447811 - 1447829 + g 76 -9.6 -3.00704 | opp_overlap 1447800 ATAACCGAACATTTC GGCTAAAG GCA CTTTGGCC TGTACTTTAGACAAT TERM 1020 1449784 - 1449813 + r 76 -8.1 -3.79251 | opp_overlap 1449773 1449783 1449781 1449784 1449787 1449789 1449804 1449809, overlap 1449789 TGAATTGCTAAATAG CAACAGTTTATTT AATC AAATAAACTTTTG TTTAATAATAAACTA TERM 1021 1449789 - 1449808 + r 80 -6.6 -4.95484 | opp_overlap 1449789 1449787 1449784 1449783 1449781 1449804, overlap 1449784 TGCTAAATAGCAACA GTTTATTT AATC AAATAAAC TTTTGTTTAATAATA rps7 1450323 - 1449853 - | 30S ribosomal protein S7 TERM 1022 1450279 - 1450295 + g 70 -4.3 -4.77438 | overlap 1450281 ACTATTAAATTGGGG GTCTGGT AAA ACCGGTC TTTTTACTGCTGCAT rpsL 1450727 - 1450350 - | 30S ribosomal protein S12 TERM 1023 1450570 - 1450549 - G 74 -6.7 -4.19238 | gap 1 GCGGTAACTTCAAAA CCAGAAGTTA GTC TAACT-CTGG CAACTTTTCTTAAGG TERM 1024 1451151 - 1451161 + G 71 -5.4 -4.65895 | GAATTTTATGTTCAA TTCC ATG GGAA TTTTTAGATAGAGAA TERM 1025 1451843 - 1451817 - g 73 -4.4 -4.95547 | TTGATAAGAACAAAA GTGATTCATCAA ATC TTGACGCAACAC TAGAAATTAACATTC TERM 1026 1453891 - 1453872 - g 79 -5 -5.29846 | overlap 1453874 AACTTGAAATAAAAA TGGCTCAA GGAG CTAAGCCA GGCGAAGGTGGCCAA glsF 1450922 - 1455487 + | ferredoxin-dependent glutamate synthase PMM1513 1455497 - 1455790 + | hypothetical protein lipA 1456693 - 1455800 - | lipoyl synthase TERM 1027 1457124 - 1457110 - g 70 -4.3 -4.89605 | GAAAAAAATAAGAAA TCCAA AATTA TTGGA TATGCAAGAGCTATA PMM1515 1456993 - 1457679 + | site-specific recombinase PMM1516 1457663 - 1457893 + | hypothetical protein PMM1517 1458795 - 1457896 - | hypothetical protein PMM1518 1458799 - 1459554 + | hypothetical protein psaL 1460205 - 1459606 - | photosystem I reaction center protein subunit XI psaI 1460348 - 1460235 - | photosystem I reaction center subunit VIII PMM1521 1460441 - 1460827 + | annexin PMM1522 1461794 - 1460832 - | glycosyl transferase family protein TERM 1028 1461562 - 1461545 - G 71 -8.3 -3.21793 | opp_overlap 1461545, overlap 1461544 TAGAATTATCAAAAC CGGCCGC CATT GCGGCTG TTTGTCCGTAATTGG TERM 1029 1461545 - 1461562 + g 89 -10.5 -3.95153 | opp_overlap 1461545 1461544 TAGAATTATCAAAAC CGGCCGC CATT GCGGCTG TTTGTCCGTAATTGG TERM 1030 1461883 - 1461866 - R 100 -9.9 -6.25578 | opp_overlap 1461860 1461866 ATTAAACAAAAAAAA TCACCAC TAAT GTGGTGA TTTAAATTATTTGAT TERM 1031 1461866 - 1461883 + r 93 -9.9 -3.90038 | opp_overlap 1461866, overlap 1461860 ATTAAACAAAAAAAA TCACCAC TAAT GTGGTGA TTTAAATTATTTGAT psaB 1464133 - 1461905 - | photosystem I P700 chlorophyll a apoprotein A2 TERM 1032 1462956 - 1462942 - G 77 -8.6 -3.62695 | overlap 1462940 CTCTGACAAAGAATA TTGCTC CAT GAGCAA AAGCACCAACCATTA TERM 1033 1464050 - 1464030 - G 86 -11.3 -2.64616 | opp_overlap 1464021 TCTTCAGTCATACCA TCATGACTT TCA AAGTCATGA GCAGTAGCTATTCCG psaA 1466465 - 1464162 - | photosystem I P700 chlorophyll a apoprotein A1 TERM 1034 1465560 - 1465572 + g 71 -7.7 -3.54935 | AGTCATCCATAGACT TCCTG TAA CAGGA TTTAAACCACCTTTA TERM 1035 1465882 - 1465894 + g 76 -6.3 -4.57341 | overlap 1465887 ATTGACTCTATATTT TGGAA CCA TTCCA TTTTTGGAGCGGCTT TERM 1036 1466413 - 1466424 + g 74 -3 -5.38398 | overlap 1466418 TCAGCCTTGACGGGG GATT CCAA AATC TTTTTGTCTTTTTCT PMM1525 1466807 - 1468627 + | bifunctional cbiH protein and precorrin-3B C17-methyltransferase hisB 1468725 - 1469528 + | putative imidazoleglycerol-phosphate dehydratase alr 1470888 - 1469701 - | alanine racemase TERM 1037 1470256 - 1470273 + g 75 -2.8 -5.69262 | opp_overlap 1470256 ATCAATATCAATAAT TTTCAA TAATTC TTGAAA TTTTTCTTTTTGTAA PMM1528 1470969 - 1471475 + | HNH endonuclease family protein prfA 1472576 - 1471482 - | peptide chain release factor 1 rpmE 1472871 - 1472611 - | 50S ribosomal protein L31 rpsI 1473295 - 1472885 - | 30S ribosomal protein S9 rplM 1473736 - 1473305 - | 50S ribosomal protein L13 truA 1474659 - 1473853 - | tRNA pseudouridine synthase A rplQ 1475047 - 1474697 - | 50S ribosomal protein L17 TERM 1038 1474980 - 1474993 + g 85 -6.7 -4.93877 | opp_overlap 1474980 AGTTGAGTAGTTAAA GCTCT AAGA AGAGC TTTTCTTTGATCAGC rpoA 1476001 - 1475063 - | DNA-directed RNA polymerase subunit alpha TERM 1039 1475356 - 1475370 + g 72 -8.6 -3.09516 | GTTCAATTAACTGGT TTGCTG CTT CAGCAA TTGCATCATCAGGGC rps11 1476440 - 1476048 - | 30S ribosomal protein S11 TERM 1040 1476478 - 1476491 + r 73 -2.5 -5.7946 | AGTGTCATTTTTTTA TAATT AATT AATTA TTTTTTTCTTCCAGC rpsM 1476854 - 1476489 - | 30S ribosomal protein S13 rpmJ 1477016 - 1476900 - | 50S ribosomal protein L36 TERM 1041 1477010 - 1477020 + g 71 -5.4 -4.54821 | TTACTGAGGCTCTAA CCTT CAT AAGG TTTTCTCATTAAAAT adk 1477609 - 1477055 - | adenylate kinase secY 1478928 - 1477609 - | preprotein translocase subunit SecY TERM 1042 1478760 - 1478736 - G 77 -8.7 -3.76186 | opp_overlap 1478735, overlap 1478740 TATCTAGAAAACCAA TTAATTGACCA CCC TGGTCAATAAA ACTTTTAAACGCAAC TERM 1043 1478756 - 1478740 - G 80 -9.5 -3.55784 | opp_overlap 1478735, overlap 1478736 TAGAAAACCAATTAA TTGACCA CCC TGGTCAA TAAAACTTTTAAACG rplO 1479417 - 1478959 - | 50S ribosomal protein L15 rpsE 1480042 - 1479422 - | 30S ribosomal protein S5 TERM 1044 1479999 - 1480013 + g 95 -8.6 -5.14949 | GATGAGGGTGGATTC TCAGTC TTT GACTGA TTTTCTTGTTTTGTT rplR 1480426 - 1480058 - | 50S ribosomal protein L18 rplF 1480980 - 1480441 - | 50S ribosomal protein L6 rpsH 1481394 - 1480993 - | 30S ribosomal protein S8 rplE 1481941 - 1481405 - | 50S ribosomal protein L5 TERM 1045 1481878 - 1481910 + g 82 -9.4 -3.65699 | gap 1, overlap 1481881 CTTGATGAATATTTT TAAGACCAAGGTCTT TTAA AAG-CTTTGGTCTTA TTGCTTCTTTGTAGC rplX 1482373 - 1482017 - | 50S ribosomal protein L24 TERM 1046 1482144 - 1482122 - G 82 -5 -5.40474 | opp_overlap 1482132 1482135, overlap 1482127 1482132 1482135 ATCCTTTGAAAAAAA CATTACAT TAGAAGC ATGTAATG ATGCTTCTTCTGTCA TERM 1047 1482234 - 1482252 + g 74 -6 -4.62471 | overlap 1482245 CCCTTCACAACTACT CTATTCTC TAG GGGGATAG TTTTTAAAACTTCAC rplN 1482739 - 1482374 - | 50S ribosomal protein L14 rpsQ 1483002 - 1482736 - | 30S ribosomal protein S17 rpl29 1483229 - 1483011 - | 50S ribosomal protein L29 TERM 1048 1483186 - 1483205 + g 78 -6.6 -4.49337 | opp_overlap 1483186 1483189 TCAGTTATTTGAGAA GAATTTAA CTTT TTAAATTC TTTTATAGATTCTGA TERM 1049 1483218 - 1483228 + g 70 -4 -5.06451 | TTCTTTTATAGATTC TGAA TTT TTCA TTTTTTAACCTCCTC rplP 1483708 - 1483226 - | 50S ribosomal protein L16 rpsC 1484451 - 1483720 - | 30S ribosomal protein S3 rplV 1484837 - 1484451 - | 50S ribosomal protein L22 rpsS 1485113 - 1484838 - | 30S ribosomal protein S19 rplB 1486021 - 1485158 - | 50S ribosomal protein L2 TERM 1050 1485746 - 1485758 + g 77 -7.7 -4.04206 | opp_overlap 1485745 1485746 TTCATAGAATAAAAG TGCGA GTC TCGCA TTTCTATGGGGATCA TERM 1051 1485758 - 1485746 - G 71 -7.7 -3.49864 | opp_overlap 1485746, overlap 1485745 TTCATAGAATAAAAG TGCGA GTC TCGCA TTTCTATGGGGATCA rplW 1486336 - 1486034 - | 50S ribosomal protein L23 rplD 1486965 - 1486333 - | 50S ribosomal protein L4 rplC 1487615 - 1486962 - | 50S ribosomal protein L3 PMM1559 1487908 - 1488378 + | NADH dehydrogenase I subunit N PMM1560 1488368 - 1489378 + | hypothetical protein TERM 1052 1489449 - 1489431 - f 74 -4.7 -5.21236 | AATCTAGAATAAAAA TTTCTAT TTTTG ATAGAAA AAAATCTAGTAATGT PMM1561 1489572 - 1490348 + | hypothetical protein TERM 1053 1490499 - 1490484 - g 100 -7.6 -5.74288 | opp_overlap 1490484, overlap 1490487 1490497 AGAAAGAAGAAAAAA GGATTC AAAG GAATCC TCATCTGAAGAGAAA TERM 1054 1491556 - 1491534 - g 74 -6.4 -4.50943 | TAATAATCCAGAAAA TGATGTGATT GCT AATAACATCA AAAAAATAGCTTAGA recA 1490458 - 1491570 + | recombinase A PMM1563 1491818 - 1491573 - | hypothetical protein PMM1564 1493294 - 1491846 - | hypothetical protein TERM 1055 1492317 - 1492338 + g 71 -3.1 -5.25803 | opp_overlap 1492317, overlap 1492319 TGAGAAAATTATTAA TTTTTTAGA CTTA TCTAAAATA TTTTTTGTAAACATT TERM 1056 1493970 - 1493959 - g 83 -5.8 -5.1356 | CTTCATTAATAAAAA CTGC CAAT GCAG AGAAGAATGAATCGC PMM1565 1493388 - 1494227 + | arogenate dehydrogenase PMM1566 1495739 - 1494234 - | hypothetical protein TERM 1057 1494788 - 1494802 + g 79 -2.8 -5.73339 | CACCGCTTGGATCAG GAAGAC TTT GTATTC TTTTTTTATAATTAT PMM1567 1495744 - 1496622 + | hypothetical protein PMM1568 1496995 - 1496630 - | hypothetical protein TERM 1058 1497590 - 1497566 - g 72 -5.1 -4.81249 | opp_overlap 1497559 1497584, overlap 1497559 1497584 1497587 TTGGAAATTTAAAAA TTAATTCTGCC CAT GAGAGAATTAA AAGATTTAATCCTAA TERM 1059 1497727 - 1497749 + G 72 -3.4 -5.26119 | TATTTAATAAACGAT GCCTGTTTAA TAC TTAATAAGGC TTTTGTTTTTGGAAG TERM 1060 1498363 - 1498345 - g 70 -4.6 -4.86033 | overlap 1498346 1498355 1498357 AAACGTTCAGAAAAA GCATCAAA AAT TTTGATGA AATTTAAAATTTCCT TERM 1061 1498362 - 1498346 - g 73 -8.1 -3.50535 | overlap 1498345 1498355 1498357 AACGTTCAGAAAAAG CATCAAA AAT TTTGATG AAATTTAAAATTTCC TERM 1062 1498383 - 1498355 - g 72 -4.7 -4.88129 | overlap 1498346 1498345 1498357 AAAAAGCATCAAAAA TTTTGATGAAATT TAA AATTTCCTCAACA TCAATAGAAGGGGGA moeB 1497283 - 1498431 + | molybdopterin biosynthesis protein PMM1570 1499606 - 1498446 - | hypothetical protein TERM 1063 1500222 - 1500206 - g 81 -3.8 -5.63504 | AAGTTTACAAAAAAA GATATA AGGGA TATATC AAGAGCATTGGGTTT TERM 1064 1500296 - 1500279 - g 74 -8.5 -3.21099 | CTTGTTTATCATCAA GATTTCC TTAT GGAAATC AAATTACAAATGAAA PMM1571 1499717 - 1500541 + | hypothetical protein PMM1572 1500985 - 1500557 - | S-adenosylmethionine decarboxylase proenzyme recF 1502009 - 1501038 - | putative DNA repair and genetic recombination protein RecF TERM 1065 1502082 - 1502104 + r 73 -5.8 -4.8384 | GTCGATCTCAAAACT TTTATGATTT CGA AAATTATAAA TTTTTAAGTTATTTA PMM1574 1502734 - 1502288 - | hypothetical protein TERM 1066 1502595 - 1502577 - G 84 -5.4 -5.45652 | opp_overlap 1502593 ATCGTGAAGAAAAAA TTACTATT TTT AATAGCAA GAGATATCTTTTGTG ppc 1505707 - 1502738 - | phosphoenolpyruvate carboxylase PMM1576 1506879 - 1505761 - | hypothetical protein TERM 1067 1506709 - 1506720 + g 70 -4.4 -4.92314 | TAAATTCTTATAACT GACT TTAT AGTC TTTTTCTGGATTCGT TERM 1068 1506896 - 1506921 + r 70 -6.1 -4.28111 | opp_overlap 1506896 TATCTATCCAAACAA GCCAATGCCAT TAAT ATGCCTTTGGC TTTATTAATAGTCTC trpE 1508400 - 1506880 - | anthranilate synthase component I/chorismate-binding protein psaD 1508882 - 1508460 - | photosystem I protein PsaD PMM1579 1510362 - 1508995 - | hypothetical protein TERM 1069 1510008 - 1509998 - G 80 -5.4 -5.22794 | opp_overlap 1509998 1509988 ATAATTATTAAAAAA GGTT CAT AACC ATCTTTAGTATTTAA rodA 1511630 - 1510359 - | hypothetical protein PMM1581 1512703 - 1511636 - | ATPase TERM 1070 1513053 - 1513035 - g 70 -3.8 -5.04987 | overlap 1513036 1513037 AAGAGTTTTAAAAAA CGGCTCAA TTT TTGAGCAA GCTGGAGTGAATTTC hemF 1512865 - 1513893 + | coproporphyrinogen III oxidase PMM1583 1514483 - 1513923 - | hypothetical protein TERM 1071 1514919 - 1514897 - g 100 -10.8 -5.09762 | opp_overlap 1514902 ATTTGAAGATAAAAA CATAATGAAA ATA TTTCATTATG CCAGATTTGATGTGG rnd 1514652 - 1515293 + | putative ribonuclease D PMM1585 1515560 - 1515294 - | hypothetical protein TERM 1072 1515337 - 1515368 + g 87 -4.6 -5.84432 | opp_overlap 1515341, overlap 1515338 1515341 TTTTCTAGAGTCGAC ATAAGTTTATCTAG TATT TTAGATGAACTTAG TTTTTTTCTATTATC TERM 1073 1515338 - 1515367 + g 79 -8.1 -4.08219 | opp_overlap 1515341, overlap 1515337 1515341 TTTCTAGAGTCGACA TAAGTTTATCTAG TATT TTAGATGAACTTA GTTTTTTTCTATTAT PMM1586 1516901 - 1515594 - | hypothetical protein TERM 1074 1516575 - 1516551 - G 75 -5.1 -4.93365 | overlap 1516544 TCTTACAATTAAAAA GTTTTTAAAAG CAT CTACTAAAAAC CCTGCAAAAAAATCA TERM 1075 1517151 - 1517164 + r 80 -2.5 -6.01369 | CTGTAGATTCTAGGA TAATA AAAG TATTA TTTTTTTATTCTTTC PMM1587 1517411 - 1517250 - | hypothetical protein PMM1588 1518042 - 1517428 - | carboxylase domain-containing protein purM,purG 1519220 - 1518177 - | phosphoribosylaminoimidazole synthetase TERM 1076 1518601 - 1518621 + g 74 -7 -4.23379 | AAGTTATATTTTTTT TCAAATTG CTTAT CAATTTGA TTATTATTTTCAATT panC 1519318 - 1520850 + | bifunctional pantoate ligase/cytidylate kinase PMM1591 1521325 - 1520852 - | low molecular weight phosphotyrosine protein phosphatase pebB 1522120 - 1521347 - | phycoerythrobilin:ferredoxin oxidoreductase pebA 1522831 - 1522121 - | dihydrobiliverdin:ferredoxin oxidoreductase TERM 1077 1522245 - 1522259 + g 81 -2.9 -5.80003 | GCACTATATTTATCG TAATC TATTT GATTA TTTTTTATTTGTTCC ho1 1523547 - 1522837 - | Heme oxygenase PMM1595 1524069 - 1523605 - | hypothetical protein TERM 1078 1523659 - 1523642 - G 72 -5.7 -4.38927 | GTTGTAGAGAATAAA TTGTAAA GTTC TTTACAA ACTAAAAAAAGATTA TERM 1079 1525331 - 1525297 - g 100 -15.2 -3.93262 | overlap 1525291 1525300 TCCAACAAATTCAAA CAAGGCCTCAAGAATA TTC TATTCTTGCGACCTTG AACTTAAACGGAGAT TERM 1080 1525328 - 1525300 - g 93 -11.1 -4.07537 | overlap 1525297 1525291 AACAAATTCAAACAA GGCCTCAAGAATA TTC TATTCTTGCGACC TTGAACTTAAACGGA TERM 1081 1525632 - 1525648 + G 76 -7.3 -4.25283 | GAACCAAAGGTAGCA CCACTAT CCT GTAGTGG TTTTGCTGAAGCAAT icd 1524255 - 1525679 + | isocitrate dehydrogenase PMM1597 1527034 - 1525676 - | hypothetical protein TERM 1082 1525982 - 1525950 - G 82 -6.4 -5.01553 | opp_overlap 1525947 1525950 AATTCAGAAATAAAA TGAGCAAGAGAATT ATTAA AATTTACTTGCTCA TCGTTCCTAGCTAGA TERM 1083 1525950 - 1525982 + g 71 -8.6 -2.79098 | opp_overlap 1525950, overlap 1525947 AATTCAGAAATAAAA TGAGCAAGAGAATT ATTAA AATTTACTTGCTCA TCGTTCCTAGCTAGA TERM 1084 1526231 - 1526255 + g 77 -2.9 -5.68489 | TCCAATTACTAAAAA TCCTGGAAGAA ATT TTTTTTCACGA TTTTTTCTTCTTATA PMM1598 1527901 - 1527047 - | hypothetical protein PMM1599 1528817 - 1527912 - | hypothetical protein TERM 1085 1528492 - 1528508 + g 93 -6.6 -5.32565 | CCACCTAAAGAATTC CCAACA ATAAA TGTTGG TTTTTTAATTACTTC TERM 1086 1528680 - 1528719 + g 73 -4.5 -5.011 | gap 1, opp_overlap 1528679 1528678 ATGATCAGTAGAAGC TCCAAAACCATGTATCAA CAAAA TTGC-ACATGATTTTGGA TTTTCTTCTTTGGGT PMM1600 1530227 - 1528860 - | CPA2 family Na+/H+ antiporter TERM 1087 1529105 - 1529083 - G 73 -7.8 -3.58343 | opp_overlap 1529083 1529082 GGCATCATTCCTAAA CCTACAACTA ATC TATTTGTAGG CTTATCGCTTGAGAA PMM1601 1530381 - 1532927 + | phosphorylase PMM1602 1533738 - 1533406 - | hypothetical protein TERM 1088 1534467 - 1534437 - g 76 -6.4 -4.59653 | AACGAAAAAGATAAA TTAATACTTCAT ACTTTCA ATGAAGCATTAA CACATTCCTCCGCAA rnc 1534329 - 1535078 + | putative ribonuclease III PMM1604 1535268 - 1535083 - | hypothetical protein TERM 1089 1535664 - 1535647 - g 76 -7.1 -4.32669 | overlap 1535661 AATTTCAGAAAATAA CCAATTA CACA TAATTGG AAAAGTTATTAACTT rimM 1535291 - 1535830 + | 16S rRNA-processing protein glmS 1537746 - 1535851 - | D-fructose-6-phosphate amidotransferase TERM 1090 1537782 - 1537752 - R 79 -8.6 -4.12532 | opp_overlap 1537748 1537755, overlap 1537755 TTCCGCACATATAAA TAATTTTCTTCAAT TAT ATTGAATAAAATTA AGTATTTAATAAGAC psaC 1538073 - 1537828 - | photosystem I subunit VII acpP 1538208 - 1538450 + | acyl carrier protein fabF 1538457 - 1539701 + | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 1091 1540123 - 1540135 + G 73 -7.7 -3.60792 | TAGGGGCAGGAATTT CCAAC GCA GTTGG TTTAGCAATTGCAGA TERM 1092 1540702 - 1540686 - g 78 -2.3 -5.76949 | GAGTCTGAAAAAAAA TGGAATT TAA AATTTCA AGAATATCAAAACAC TERM 1093 1541110 - 1541127 + G 80 -7.7 -4.18421 | CAATGAGACTATCTG CTCTCAG TGAG CTGGGAG TTATTTATGTACTTA tktA 1539744 - 1541750 + | transketolase thiC 1543128 - 1541758 - | thiamine biosynthesis protein ThiC TERM 1094 1542083 - 1542103 + g 78 -9.8 -3.36515 | opp_overlap 1542077 1542095, overlap 1542081 TCTCTAACATCTTCC GCATTTGG AAGAC CCAAATGC TCTTTAGGAGTGACA PMM1612 1543537 - 1543322 - | hypothetical protein PMM1613 1544716 - 1543556 - | zinc metallopeptidase TERM 1095 1544676 - 1544688 + g 90 -4.9 -5.77853 | TTAATAAGTTCATCC TTGAT TGA ATCAA TTTTTTTTAACAATT PMM1614 1545508 - 1544720 - | hypothetical protein ruvB 1546553 - 1545495 - | Holliday junction DNA helicase B TERM 1096 1546577 - 1546590 + G 70 -3.9 -5.03314 | ATTAATGGCAATTGT TCTTT GGGG AAAGA TTTTTTACAACTGCA TERM 1097 1546965 - 1546947 - g 90 -6 -5.52909 | opp_overlap 1546947 CAATACTGAAAAAAA GGGATTAA CTA TTATTCCC TTATCTATTTATTTA smpB 1546573 - 1547100 + | SsrA-binding protein PMM1617 1547377 - 1547126 - | hypothetical protein lysS 1548943 - 1547405 - | lysyl-tRNA synthetase TERM 1098 1548827 - 1548841 + g 70 -7.2 -3.74872 | opp_overlap 1548822 1548821 1548819 TTCTAAATAGCCGAA TTTCTC AGT GAGAAA TTTAGTAGAATGAGT PMM1619 1549740 - 1548994 - | two-component response regulator PMM1620 1550452 - 1549913 - | hypothetical protein mreC 1551202 - 1550453 - | putative rod shape-determining protein TERM 1099 1551094 - 1551081 - G 77 -3.9 -5.39905 | opp_overlap 1551081 ATTAAATAATAAAAA TCTTT ATAT AAAGA TCCTTTTGATATTCT mreB 1552259 - 1551207 - | rod shape determining protein ssb 1552392 - 1552763 + | single-strand DNA-binding protein TERM 1100 1552772 - 1552795 + T 79 -7 -4.63932 | TTTTTAAGTTATTTT TTTTTTATAA AGTC TTATAAAAAA TTTTATTAAAAAATA PMM1624 1553419 - 1552760 - | DedA family alkaline phosphatase-like protein ahcY 1554840 - 1553422 - | S-adenosyl-L-homocysteine hydrolase TERM 1101 1555305 - 1555293 - g 76 -6.3 -4.64846 | GGAGAAATTATAAAA TTTGG GAT CCAAA AAATTTATTAACCTT PMM1626 1554890 - 1555327 + | hypothetical protein PMM1627 1556283 - 1555285 - | putative carbohydrate kinase PMM1628 1556373 - 1557287 + | alpha/beta fold family hydrolase PMM1629 1558273 - 1557272 - | type II alternative sigma-70 family RNA polymerase sigma factor PMM1630 1559783 - 1558374 - | Mg2+ transporter PMM1631 1560155 - 1559826 - | hypothetical protein TERM 1102 1560093 - 1560079 - G 73 -4.4 -5.06472 | opp_overlap 1560083, overlap 1560083 ATAGAAATAACAAAA TTATTT TTA AAATAA AATCTTAGGAATGTA PMM1632 1560523 - 1560152 - | hypothetical protein PMM1633 1560856 - 1560527 - | hypothetical protein gyrB 1562820 - 1560853 - | DNA gyrase subunit B TERM 1103 1562723 - 1562742 + g 71 -7.8 -3.43492 | opp_overlap 1562739, overlap 1562739 GAACCAATATACATT CCTGGTCG TTTA CGAACAGG TTCTAATCCCTCTAA TERM 1104 1562849 - 1562839 - H 70 -2.6 -5.51612 | opp_overlap 1562843 1562844, overlap 1562844 ATATAAAAAATAAAA TAAA ACT TTTA AAATGTTATTTTTAA TERM 1105 1562867 - 1562844 - H 81 -5.5 -5.43329 | opp_overlap 1562843 1562844, overlap 1562839 AAAAATAAAATAAAA CTTTTAAAA TGTTAT TTTTAAAAG GTGTTTCATTAAATT miaA,trpX 1562973 - 1563872 + | tRNA delta-2-isopentenylpyrophosphate (IPP) transferase infC 1563924 - 1564496 + | translation initiation factor IF-3 PMM1637 1564595 - 1565566 + | putative transcriptional regulator cysE 1565573 - 1566307 + | Serine acetyltransferase secA 1569146 - 1566315 - | preprotein translocase subunit SecA TERM 1106 1568323 - 1568333 + g 74 -5.4 -4.74801 | opp_overlap 1568323 TGATCAGTTAATATA CAAC TAC GTTG TTTTTCATCAACTTC TERM 1107 1569082 - 1569096 + g 74 -8.6 -3.21703 | overlap 1569081 AATAAGTTTATTTCT TCAACC ATT GGTTGA TATCTCTTTAACTTT PMM1640 1569324 - 1569779 + | GNAT family acetyltransferase TERM 1108 1569816 - 1569800 - T 73 -2.3 -5.63517 | opp_overlap 1569800 TTCTTAAATAAAAAA TATTTCG AAC CTAAATA ATTATTTAAGGCGCC PMM1641 1570233 - 1569781 - | hypothetical protein PMM1642 1570637 - 1570206 - | transcription regulator TERM 1109 1570783 - 1570799 + r 75 -9.5 -2.62983 | TCGAACTCTCGACAT TCTCCTT GGC AAGGAGA TGCTCTACCACTGAG ribH 1571363 - 1570887 - | riboflavin synthase subunit beta TERM 1110 1570942 - 1570953 + g 77 -4.4 -5.24531 | TGTAAAGCATAGTTC CAAC CAAG GTTG TTTTTTATCCCAGCT psbZ 1571609 - 1571412 - | putative photosystem II reaction center protein Z TERM 1111 1573039 - 1573021 - g 80 -9 -3.64184 | AAATATTATTTCAAA CTTTTTAG AGT CTAAAAAG TTGCGGACAGACACC TERM 1112 1573681 - 1573671 - g 84 -5.4 -5.45802 | CCGCCAAAACAAAAA GGAT TAG ATCC GTAGCAAAAGCTATT TERM 1113 1574240 - 1574226 - g 95 -5.8 -5.75945 | opp_overlap 1574224 1574226 ATCTTGCAAAAAAAA TTGTAT GTA ATACAA TCTTTGCCACTCATT mutS,fdv 1571753 - 1574500 + | DNA mismatch repair protein cobH 1575153 - 1574530 - | putative precorrin-8X methylmutase CobH TERM 1114 1574881 - 1574867 - G 70 -7.2 -3.58162 | opp_overlap 1574874 1574876 CTATCATCAAACCAA TGTTTC GCC GAAACA ACTAAGTTTCCGTTT PMM1647 1575216 - 1576217 + | DNA polymerase III subunit delta TERM 1115 1576480 - 1576459 - g 72 -8.7 -3.03474 | GCCGAGAATTAGATA TGCTCCTCT CTAC AGGGGAGCA AGTAACTATGGCACT lysC 1576257 - 1578017 + | aspartate kinase uvrB 1580065 - 1578026 - | excinuclease ABC subunit B PMM1650 1580904 - 1580095 - | hypothetical protein PMM1651 1580957 - 1581967 + | hypothetical protein PMM1652 1583967 - 1581964 - | hypothetical protein dapA 1584952 - 1584044 - | dihydrodipicolinate synthase asd 1585980 - 1584949 - | aspartate semialdehyde dehydrogenase tig 1586108 - 1587529 + | trigger factor clpP2 1587595 - 1588242 + | Clp protease proteolytic subunit clpX 1588346 - 1589713 + | ATP-dependent protease ATP-binding subunit dnaX 1589771 - 1591510 + | DNA polymerase, gamma and tau subunits PMM1659 1592813 - 1591512 - | glycosyl transferase family protein TERM 1116 1591839 - 1591852 + g 86 -3.9 -5.76949 | opp_overlap 1591831 GGTTAAATCAAACTT TTGAA TAAG TTCAA TTTTTTTTGAAAATA TERM 1117 1592623 - 1592635 + g 76 -3.4 -5.41787 | overlap 1592613 TTTTCGTTACTTTGT GAAG AAACA CTTC TTTTTATATTTTTTG TERM 1118 1592845 - 1592861 + r 88 -5.2 -5.85011 | opp_overlap 1592845 TTTTCATTTTAATTA TTGAGA CGATA TCTCAA TTTTTTTAATTTTTG PMM1660 1594380 - 1592842 - | putative amidase enhancer TERM 1119 1593967 - 1593948 - G 72 -7.2 -3.76839 | CAACTGGAATCCAAA CTTCCCAA TTGT TTGGAAAG GCAACTAGAGCTTGA rpmI 1594472 - 1594669 + | 50S ribosomal protein L35 TERM 1120 1594774 - 1594749 - g 91 -7.7 -5.20331 | opp_overlap 1594756, overlap 1594767 AAAGAAGAAACAAAA TCTTAAACCTT GCTA AAGGTTTCAGA GGAGGAAACAAAAAT rplT 1594700 - 1595047 + | 50S ribosomal protein L20 PMM1663 1595086 - 1595643 + | putative photosystem I assembly related protein Ycf37 thiG 1595645 - 1596442 + | thiazole synthase sqdB 1596609 - 1597802 + | sulfolipid (UDP-sulfoquinovose) biosynthesis protein sqdX 1597831 - 1598964 + | SqdX PMM1667 1599227 - 1598976 - | hypothetical protein gcvP 1602270 - 1599361 - | glycine dehydrogenase TERM 1121 1600443 - 1600409 - G 74 -8.6 -3.2818 | opp_overlap 1600410 1600414 1600441, overlap 1600410 1600414 TTAATAGTTACAACA TCAAATCCTGCCATCA CTG CGCTAGCAGGATTTGT TCCATGAGCACTTTG TERM 1122 1600442 - 1600410 - G 87 -12.1 -2.56426 | opp_overlap 1600410 1600414 1600441, overlap 1600409 1600414 TAATAGTTACAACAT CAAATCCTGCCATCA CTG CGCTAGCAGGATTTG TTCCATGAGCACTTT TERM 1123 1600410 - 1600442 + g 74 -9.2 -3.06312 | opp_overlap 1600410 1600409 1600414, overlap 1600414 1600441 TAATAGTTACAACAT CAAATCCTGCCATC ACTGC GCTAGCAGGATTTG TTCCATGAGCACTTT TERM 1124 1600438 - 1600414 - G 74 -7.1 -3.9749 | opp_overlap 1600410 1600414, overlap 1600410 1600409 AGTTACAACATCAAA TCCTGCCATCA CTG CGCTAGCAGGA TTTGTTCCATGAGCA TERM 1125 1601031 - 1601000 - G 71 -8.8 -2.82936 | overlap 1600993 1600999 AGGGAAATTCCAAAT CCTTTAGATTCCTC GATC GATGAACCCAAAGG TAAGATTCTAAAGTT gcsH 1602706 - 1602317 - | putative glycine cleavage H-protein PMM1670 1604004 - 1602715 - | cystathionine beta-lyase family aluminum resistance protein PMM1671 1604716 - 1604009 - | hypothetical protein TERM 1126 1605005 - 1605017 + G 87 -7.7 -4.80077 | GTTTTGGAGCATGCC TGCAG TAA CTGCA TTATTTTTCTTTTAC des9 1604745 - 1605731 + | Fatty acid desaturase, type 1 rplI 1605752 - 1606207 + | 50S ribosomal protein L9 dnaB 1606266 - 1607648 + | DnaB replicative helicase PMM1675 1607660 - 1609624 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1127 1609934 - 1609924 - g 71 -5.4 -4.63479 | GATTAGAAATCAAAA CAAG AAT CTTG CCTGGGCTGAAAGTT PMM1676 1609631 - 1610275 + | hypothetical protein PMM1677 1611416 - 1610883 - | hypothetical protein PMM1678 1611496 - 1611915 + | hypothetical protein TERM 1128 1612507 - 1612486 - g 74 -6.7 -4.24747 | gap 1, opp_overlap 1612485 1612486, overlap 1612482 AAAATAAAGTAGAAA TGTTTTCTCG AAA CG-GAAAACA ATTTAATAACTTTGG lig 1611933 - 1613264 + | ATP-dependent DNA ligase PMM1680 1613393 - 1613545 + | hypothetical protein PMM1681 1614146 - 1613535 - | hypothetical protein valS 1616904 - 1614148 - | valyl-tRNA synthetase PMM1683 1617329 - 1616997 - | hypothetical protein TERM 1129 1617634 - 1617619 - g 93 -9 -4.90471 | ATTTAAAAGATAAAA CATGGG GCTG CCCATG GCAAAAAATACAGTC mazG 1617516 - 1618370 + | nucleoside triphosphate pyrophosphohydrolase speE 1618367 - 1619218 + | spermidine synthase TERM 1130 1619904 - 1619935 + G 79 -2.8 -5.78622 | overlap 1619906 1619920 TTTGATCCAAGTTTA TTACCTGGTACGGG AACT CCAGAACCAGGAGG TTTTTTTTGGAATGA PMM1686 1619220 - 1620104 + | arginase TERM 1131 1620223 - 1620202 - g 80 -8.9 -3.6806 | ATATATTGAGTCAAA TGCAAAATT AGTA AATTTTGCA GGTTGGGAAATGCCC TERM 1132 1620738 - 1620722 - g 73 -8.1 -3.54129 | opp_overlap 1620722, overlap 1620699 1620729 CATATTTCGTCCAAA GAAAAGA TTT TCTTTTC GAAAACGGGCTATAC TERM 1133 1621132 - 1621158 + G 70 -8.2 -3.07947 | opp_overlap 1621135 1621142, overlap 1621135 TAGTTGGTCCCCTAC TAAGCAAAAG GCAATAG CTTTTGCTTA TATTCAAAATTCTTA gcvT 1620155 - 1621267 + | glycine cleavage system aminomethyltransferase T TERM 1134 1622766 - 1622755 - g 81 -3 -5.85244 | overlap 1622759 AATTAAAAGAAAAAA TAGA GAGC TCTA CAGCACATGCTTATG aspS 1621326 - 1623122 + | aspartyl-tRNA synthetase TERM 1135 1623127 - 1623145 + F 77 -3.2 -5.65927 | opp_overlap 1623120 1623127 TTGATGAATAAACTA TTTATGGA TGA TCAATAAA TTTTTTGTTTAAATA TERM 1136 1624545 - 1624525 - g 77 -4.1 -5.45726 | TAGACTTCAAAAAAA TACAACT GGTAAAG AGTTGTA TAACGAAGATGTTAT pyrG 1623197 - 1624807 + | CTP synthetase TERM 1137 1625399 - 1625422 + G 74 -6.6 -4.28432 | opp_overlap 1625413 AAATATTATGTACAG CCCGCTTGGG AAAA CGCAAGAGGG TTTTCACTTACGATT PMM1690 1624835 - 1625506 + | putative organic radical activating protein TERM 1138 1625657 - 1625647 - g 77 -4 -5.51046 | CAAAGACATAAAAAA GAAT TAG ATTC CGCATTCACAATAGC TERM 1139 1625815 - 1625792 - g 79 -8.2 -4.01088 | TACAGCAAAATACAA TTCCAAACAC CTAT GTGCCTGGAA GAAATACAATCTTTA PMM1691 1625512 - 1626186 + | ATPase PMM1692 1626176 - 1627495 + | putative p-aminobenzoate synthetase PMM1693 1627492 - 1628319 + | aminotransferase class-IV cobA 1629107 - 1628322 - | putative uroporphyrin-III C-methyltransferase PMM1695 1629153 - 1630403 + | major facilitator superfamily multidrug-efflux transporter TERM 1140 1631724 - 1631709 - g 77 -7.6 -4.1466 | ATCCAATGGGCAAAA CAGCTT GAGC AAGCTG GAATTCATGTTGTTT TERM 1141 1632226 - 1632243 + G 72 -2.7 -5.46698 | GTATTATTGGGCATT TTCTTGA ACAT TCTAGAA TTTTTTGGTTTTACA ppk 1630422 - 1632509 + | polyphosphate kinase TERM 1142 1632885 - 1632899 + G 72 -8.6 -3.14132 | opp_overlap 1632876, overlap 1632884 ACTTAAGCAGTATTG GAAGAG TTC CTCTTC TTACTGCAGCAGAAG TERM 1143 1633336 - 1633316 - g 71 -5.3 -4.64598 | GAATTATCTCAAAAA TCTGGAAGG CAA CCAACCAGA TTAGAAATGGCAACA PMM1697 1632707 - 1633726 + | type II alternative sigma-70 family RNA polymerase sigma factor TERM 1144 1634134 - 1634146 + G 88 -6.3 -5.40072 | opp_overlap 1634134, overlap 1634145 GGAAAGAACTTTAAA TCCAA AAG TTGGA TTTTTTTAAACCAAA TERM 1145 1634245 - 1634255 + G 75 -2.6 -5.63374 | ATCCAAAAATACACT TTTA ATA TAAA TTTTTTTACTGTTGC PMM1698 1633927 - 1634376 + | hypothetical protein aroF 1635445 - 1634378 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1146 1634470 - 1634485 + g 80 -6.2 -4.87291 | opp_overlap 1634469 TACCATATTCAAGAT CTTTCA TATT TGAAAG TTTTTGATTACCCTC TERM 1147 1636517 - 1636499 - g 77 -3.2 -5.63857 | AAAAATTGAAAAAAA TACTAATT ATG AAATAGTA ATAAGTCAATTCGAC acnB 1635543 - 1638116 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase PMM1701 1638126 - 1639484 + | putative chloride channel purU 1640348 - 1639494 - | formyltetrahydrofolate deformylase TERM 1148 1640631 - 1640617 - g 78 -5.7 -4.7878 | TACTTAGAAAACAAA GCCAT GAATT ATGGC CAAAATGGATCAAAT TERM 1149 1640959 - 1640947 - g 76 -3.5 -5.44198 | AAGAAATAATAAAAA TTAAA AGA TTTAA CAAACAATGGATTGC PMM1703 1640397 - 1641479 + | NAD binding site:D-amino acid oxidase dnaK 1643380 - 1641476 - | molecular chaperone DnaK2, heat shock protein hsp70-2 TERM 1150 1643700 - 1643670 - g 82 -2.6 -5.94713 | opp_overlap 1643670 1643671, overlap 1643671 ATTCTATAAAAAAAA TGAATTGTAAAGGT TTG AACATTACAATTCC TTTTAAGCAAAAAGT aroE 1643498 - 1644355 + | shikimate 5-dehydrogenase rpsF 1644465 - 1644929 + | 30S ribosomal protein S6 argG 1646147 - 1644933 - | argininosuccinate synthase TERM 1151 1646199 - 1646168 - H 73 -7.5 -3.73775 | opp_overlap 1646168 1646164 1646172, overlap 1646172 TTTACCTCCAGTAAA GAAAGCTGAAA TCCTAATTAC TTTCAGCTTTC TAAATTTTATTAAAA TERM 1152 1646309 - 1646290 - H 79 -5 -5.5604 | opp_overlap 1646292, overlap 1646292 TTAATTAATAAAAAA TCTGGCTT TAAA AAGCCATA GTATTTAAAAAAAAT PMM1708 1646439 - 1646717 + | hypothetical protein TERM 1153 1646943 - 1646967 + G 91 -7.2 -5.16071 | AAATACTCCTACGAT GGGCGGAATA TTTAT TATTTTGCCC TTTTTATTACTACTT mraY 1646698 - 1647777 + | putative phospho-N-acetylmuramoyl-pentapeptide-transferase sps 1649373 - 1647967 - | sucrose phosphate synthase PMM1710 1647788 - 1648051 + | hypothetical protein TERM 1154 1649536 - 1649522 - TR 95 -4.4 -6.38039 | overlap 1649534 CACTTAAAAAAAAAA TAATTT TAC AAATTA AATATTAACAATACG uvrA 1652475 - 1649575 - | excinuclease ABC subunit A TERM 1155 1651055 - 1651065 + g 70 -4 -5.00027 | opp_overlap 1651055 TGTTTCTCGGATAAA GAAA TAT TTTC TTTTATATTTTTACT recN 1654209 - 1652530 - | DNA repair protein RecN TERM 1156 1653176 - 1653189 + g 81 -3.9 -5.65513 | opp_overlap 1653176 TCTTCCTCAAATAAA TTTGT ATCT ACAAA TTTTTTTAATTCATC TERM 1157 1655678 - 1655660 - g 71 -5.4 -4.69559 | opp_overlap 1655660 AAAGTTTAAAAGAAA TGCTTTTT GAT AAAAAACA ATTTAAATGGGACAG PMM1714 1654279 - 1656135 + | hypothetical protein TERM 1158 1656299 - 1656287 - g 76 -6.3 -4.58395 | opp_overlap 1656290 TCGATTCTTTAAAAA CTTTC GCT GAAAG CGGTAATTCATCAAA PMM1715 1656136 - 1656711 + | hypothetical protein thrC 1656714 - 1657817 + | threonine synthase