TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.677503 %AT, 1444796 nt, 8079 terms. Intergenic: 0.753242 %AT, H2T: 123478 nt, 943 terms; T2T: 41176 nt, 663 terms; H2H: 76163 nt, 1079 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|126695337|ref|NC_009091.1| Prochlorococcus marinus str. MIT 9301, complete genome (length 1641879) dnaN 170 - 1327 + | DNA polymerase III subunit beta TERM 1 1433 - 1446 + G 71 -8.1 -3.34222 | TGTTTGGATGCACCC TCCGG TTCA CCGGA TTCTAGGATGGTACT P9301_00011 1329 - 2036 + | hypothetical protein TERM 2 3288 - 3268 - g 74 -4.1 -5.1861 | opp_overlap 3282 TTCATGAGCAAAAAA TATTTTCAT TGA AGGAAAATA AGAAATTTTCTTTTC TERM 3 3717 - 3703 - g 87 -10 -3.91072 | opp_overlap 3702 GTAAAGCTTTAGAAA CTCCTG TTA CAGGAG GTAATGTATCTTTAT P9301_00021 2040 - 4379 + | phosphoribosylformylglycinamidine synthase II purF 4427 - 5887 + | amidophosphoribosyltransferase P9301_00041 8325 - 5884 - | DNA gyrase/topoisomerase IV, subunit A P9301_00051 9266 - 8403 - | TPR-repeat pilus assembly protein TadD P9301_00061 10219 - 9263 - | hypothetical protein TERM 4 9603 - 9575 - G 71 -8.9 -2.56095 | opp_overlap 9575 9580, overlap 9579 GTGATATGCAATGCA TAGATCCGATTGT ATT ACAAACGGTTCTA CTATTGCCTTTGTGG TERM 5 9575 - 9603 + g 71 -8.9 -2.53346 | opp_overlap 9575 9579, overlap 9580 GTGATATGCAATGCA TAGATCCGATTGT ATT ACAAACGGTTCTA CTATTGCCTTTGTGG TERM 6 10011 - 9988 - G 79 -8.3 -4.1466 | ATCCAACGCTTAAAA CACTTTTTG CCTCTT CAAAAAGTG AGCCTATATTTCTTC TERM 7 10308 - 10283 - H 100 -10.7 -5.38958 | opp_overlap 10288 ACTTATAAATAAAAA GGATATATTTT AAAA AAAATATATCC TAACTCAGTAAAAAC P9301_00071 10366 - 11100 + | hypothetical protein nusB 11104 - 11721 + | transcription antitermination protein NusB TERM 8 12695 - 12683 - g 76 -3.3 -5.32565 | opp_overlap 12684, overlap 12684 TAATCAATCAAAAAA TGCTG ATC CAGCT GCTGTAGTTTTTGAT ftsY 11784 - 13103 + | signal recognition particle docking protein FtsY TERM 9 13202 - 13189 - g 70 -3.9 -5.05712 | ACAAATAATCAAAAA GAAAA AATA TTTTC GAACAAATTTATTCA TERM 10 13340 - 13360 + G 95 -8.5 -5.252 | overlap 13314 AGTTACTTGATTATG TATGTTTAA TTT TTAAACATA TTTTTTCTGAGAATA rsbU 13171 - 14514 + | protein phosphatase 2C domain-containing protein argH 14576 - 15955 + | argininosuccinate lyase TERM 11 16021 - 16033 + F 73 -3.4 -5.626 | opp_overlap 16021 GGCAACGTTACGAGA CTAC CTATT GTAG TTTTTTTATAAGGTA TERM 12 16608 - 16594 - g 74 -8.6 -3.19169 | overlap 16593 CTAATATTAATAAAT CTTCTG GAG CAGAAG GTTGGGAAGATAGAA P9301_00121 16071 - 16724 + | RNA recognition motif-containing protein P9301_00131 17725 - 16721 - | tRNA-dihydrouridine synthase A P9301_00141 17748 - 18242 + | peptide methionine sulfoxide reductase domain-containing protein TERM 13 18334 - 18318 - g 90 -8.1 -4.89393 | TAAATTTTAGAAAAA TGATTGA AAA TCAATCA GACAATATTGATAAT grpE 18317 - 19036 + | heat shock protein GrpE TERM 14 19724 - 19714 - g 75 -2.6 -5.66684 | opp_overlap 19714, overlap 19718 CAAGTTAGAAAAAAA TTAA GAA TTAA TATTCCTGCAGGAGT dnaJ 19066 - 20190 + | DnaJ protein TERM 15 20401 - 20388 - g 72 -2.5 -5.48163 | overlap 20381 AAAGAAAGTAAAAAA TTTAT AAAA ATAAA AATATTGAATGAAAA P9301_00171 20190 - 20420 + | hypothetical protein P9301_00181 20410 - 21327 + | GTPase P9301_00191 21643 - 21293 - | hypothetical protein TERM 16 21574 - 21589 + g 70 -4 -5.03145 | overlap 21563 21588 ATTTTTGAGCATCTT GCTGAA TTTG TTTAGC TTTTTTAAAAGCTTC murB 22554 - 21661 - | UDP-N-acetylenolpyruvoylglucosamine reductase murC 23916 - 22570 - | UDP-N-acetylmuramate-alanine ligase TERM 17 24540 - 24530 - g 81 -4 -5.52384 | GTGGGAGCAAAAAAA GTTA TCT TAAC TGCTCCAGGTAAAGG gap2 24170 - 25192 + | glyceraldehyde 3-phosphate dehydrogenase(NADP+)(phosphorylating) thiL 26179 - 25193 - | putative thiamine-monophosphate kinase P9301_00241 27263 - 26172 - | cyclophilin-type peptidyl-prolyl cis-trans isomerase TERM 18 26374 - 26355 - G 81 -4.4 -5.51353 | gap 1 TAAAAAGAAGAAAAA TTG-TGATG AGC CATCATCAA CTGCGGTATTTGAAT efp 27307 - 27867 + | elongation factor P accB 27867 - 28373 + | biotin / lipoyl attachment:Acetyl-CoA biotin carboxyl carrier subunit pdxA 29339 - 28350 - | 4-hydroxythreonine-4-phosphate dehydrogenase P9301_00281 30282 - 29404 - | nucleoside-diphosphate-sugar epimerase TERM 19 29471 - 29496 + g 73 -7.7 -3.5698 | opp_overlap 29469, overlap 29469 29464 AGTTTATATCCAAGT GTTTCGCATAA AAGT TTATTCGAAAC TCTTCTATTTTCCAT P9301_00291 30315 - 30545 + | transcription factor TFIID (or TATA-b) P9301_00301 30947 - 30546 - | HNH endonuclease:HNH nuclease P9301_00311 31566 - 31114 - | type II secretion system protein-like protein TERM 20 31530 - 31542 + g 82 -4.9 -5.37345 | TGAAAACTCCCAACG CTAAT AAT ATTAG TTTTTTCTCCTTAAA P9301_00321 32135 - 31623 - | hypothetical protein P9301_00331 32269 - 32466 + | hypothetical protein dhsS 33631 - 32468 - | soluble hydrogenase small subunit TERM 21 34506 - 34523 + G 79 -7.1 -4.49906 | opp_overlap 34509 ATCATTTAGCTGATG CAAGAAT TGAG ATTCTTG TTTATTTAGCTGTTC cbiD 33692 - 34804 + | cobalt-precorrin-6A synthase TERM 22 34790 - 34806 + F 75 -6.7 -4.38322 | GGTAATAAGTATATT TCTTATT TTC AATAAGA TTATTTTGTGATTCA guaA 34859 - 36445 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 23 36623 - 36640 + T 76 -2.1 -5.88061 | AATTTCTCTACACCT TAAATAA TTAA TTGTTTA TTTTTTTAATTTTTT P9301_00371 36947 - 36630 - | hypothetical protein TERM 24 37087 - 37062 - R 90 -7.6 -5.07652 | opp_overlap 37067, overlap 37065 TTCTTGAAAATAAAA TAAGAGGGCA TTTGTT TGCCCTCTTC GAGTCTTATGCACCT TERM 25 37084 - 37065 - R 93 -9.3 -4.6313 | opp_overlap 37067, overlap 37062 TTGAAAATAAAATAA GAGGGCA TTTGTT TGCCCTC TTCGAGTCTTATGCA TERM 26 37717 - 37703 - R 79 -7.2 -4.58283 | opp_overlap 37702 37703 TAATTGTTTTAAAAA TCAAGT TTT ACTTGA GTTCTACAAAACACT P9301_00381 39103 - 37790 - | hypothetical protein TERM 27 38125 - 38140 + g 75 -4.8 -5.04385 | TCAAACTATTTTTTG CAATTA CTAT TAATTG TTTTTTAAAACTATC P9301_00391 40937 - 39429 - | TPR repeat-containing protein P9301_00401 41480 - 42193 + | hypothetical protein P9301_00411 42273 - 42881 + | hypothetical protein P9301_00421 42990 - 43133 + | hypothetical protein TERM 28 44474 - 44460 - g 82 -10 -3.27298 | GGGGGCAACCAGGAA GAACCC CTT GGGTTC CAGAAGATATTGCGA P9301_00431 43289 - 44935 + | putative penicillin-binding protein P9301_00441 45482 - 44958 - | putative reductase P9301_00451 47302 - 45500 - | flavoprotein TERM 29 46313 - 46333 + g 74 -6.1 -4.431 | opp_overlap 46313, overlap 46328 AGATCCTATTAAATA TCCATCAGC ATT GTGGATGGA TTTTATAAGTACATC TERM 30 46533 - 46523 - G 71 -5.4 -4.67755 | opp_overlap 46523 ATAGTCATTGAAAAA GCTT TTT AAGC TATATTCGATAGCTG P9301_00461 49094 - 47319 - | flavoprotein TERM 31 50342 - 50366 + G 76 -7.3 -4.208 | opp_overlap 50341 50346, overlap 50356 50357 AAATTGCTAGATGAG TTAATTTCTTC AGG GCAGAAATTAA TTTCTGGTTTTAAAG alaS 49214 - 51874 + | alanyl-tRNA synthetase speA 53805 - 51859 - | arginine decarboxylase TERM 32 52292 - 52271 - G 100 -11.7 -3.83154 | opp_overlap 52282 GAATCACAAGTTAAA TCTGCAAAG TTGC CTTTGCAGA AAGGCTCTTCTAAGT TERM 33 53260 - 53278 + g 71 -5.4 -4.61527 | overlap 53256 53262 TACCTCATCTCGTTG TTCAATAA CTA TTATTGGA TTTTTGCCGAGTTTT ndk 53928 - 54386 + | nucleoside diphosphate kinase dadA 55499 - 54390 - | putative thiamine biosynthesis oxidoreductase TERM 34 55044 - 55023 - G 82 -10.9 -2.75382 | opp_overlap 55016 55022 55019, overlap 55020 GACTCCATGCAAGGA GCATGCTCT CTCA AGAGCACGC ATCAGTTGTCTTCGG TERM 35 56948 - 56960 + G 86 -4.1 -5.84381 | TTAAAAATGGCAAAA CTAAG TTA CTTGG TTTTTTTGTTGGTCA gatB 55606 - 57051 + | aspartyl/glutamyl-tRNA amidotransferase subunit B coaE 57672 - 57055 - | putative dephospho-CoA kinase TERM 36 58511 - 58491 - g 76 -6.3 -4.57755 | opp_overlap 58491, overlap 58486 ATGCAGGAGAGAAAA TTGAAAAAA GGT TTTTTCCAA TTATCCAACAAGGGA argJ 57749 - 58987 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein P9301_00541 62076 - 59311 - | hypothetical protein TERM 37 61067 - 61057 - G 71 -6.8 -4.08557 | opp_overlap 61057 TGCTGTAAAGAATAA CCTC TTC GAGG TTCTAATTTTTGCTT TERM 38 61152 - 61174 + g 72 -2.8 -5.47399 | opp_overlap 61154, overlap 61154 CATCAGCAAAGACCA TATCAAAATT AGG AATATTGATG TTTTTTTGCGCTTCA TERM 39 61236 - 61252 + g 72 -5.9 -4.42851 | opp_overlap 61248 ATAAAACTTTGGATT TTTCCTT AAG GAGGAAA TTTTGAATTTCTTCG P9301_00551 62832 - 62086 - | hypothetical protein P9301_00561 63253 - 62819 - | hypothetical protein TERM 40 63500 - 63522 + G 91 -10.6 -4.07526 | opp_overlap 63500 TATAGGTGATTACAA CGGATATGTC TTT GACATAACCG TTTCTATCGATCATT TERM 41 63522 - 63500 - g 85 -10.6 -3.42078 | opp_overlap 63500 TATAGGTGATTACAA CGGATATGTC TTT GACATAACCG TTTCTATCGATCATT P9301_00571 63318 - 63758 + | hypothetical protein P9301_00581 63799 - 63954 + | hypothetical protein P9301_00591 64970 - 64299 - | ATPases involved in chromosome partitioning TERM 42 65399 - 65412 + G 76 -5.3 -5.03747 | opp_overlap 65397 65399 AGAATAGGTAACAGA GGTTT TAAT AAACC TTTTTTGAAGAGTTT tas 65120 - 66082 + | aldo/keto reductase P9301_00611 66228 - 66091 - | hypothetical protein TERM 43 66407 - 66386 - H 80 -6.5 -5.08824 | opp_overlap 66385 66388, overlap 66388 TCTTTATTGAAAAAA GTGGAGTCC TTCC AGACTCCTC GTATCATTTGGTTGA P9301_00621 66707 - 67831 + | RNA methylase family protein P9301_00631 68219 - 67833 - | hypothetical protein P9301_00641 68682 - 68221 - | hypothetical protein P9301_00651 68974 - 68849 - | hypothetical protein P9301_00661 68853 - 69008 + | hypothetical protein P9301_00671 69089 - 69451 + | hypothetical protein TERM 44 72013 - 71975 - g 75 -2.8 -5.5943 | gap 1, opp_overlap 71982, overlap 71982 AAATTATGAAAAAAA TCAAAAATCATCATTAA TAGCTT TTAATGACGATT-TTAA TAATCTTGATAAAAA TERM 45 72007 - 71982 - g 80 -5.6 -5.31158 | opp_overlap 71982, overlap 71975 GAAAAAAATCAAAAA TCATCATTAA TAGCTT TTAATGACGA TTTTAATAATCTTGA TERM 46 72256 - 72245 - g 77 -3 -5.68023 | TGATAATCAAAAAAA TTCT CTAG AGAA GAATTTAGGTTTATT TERM 47 72770 - 72788 + G 71 -8.2 -3.30969 | opp_overlap 72765, overlap 72765 ACTTGAAAATCCTAA TTCTCCTT TAG AAGGAGGA TTAACTTTAGTGGCT smc 69528 - 73118 + | SMC ATPase superfamily chromosome segregation protein P9301_00691 73164 - 74231 + | hypothetical protein P9301_00701 75521 - 74235 - | lipid A disaccharide synthetase-like protein TERM 48 74937 - 74923 - G 72 -8.6 -3.1158 | AAAGGAATTCCAATA GAAAGC TTT GCTTTC TTAGAACCAGGCAAT TERM 49 75260 - 75275 + g 76 -6.2 -4.58213 | opp_overlap 75259, overlap 75262 GCTTTATTAATAATT TCCAAA AACT TTTGGA TTTTGTAATTAATTC TERM 50 75388 - 75398 + g 74 -5.4 -4.93079 | TCTTGTTTATCTTCA TCAC TTA GTGA TTTATTTATTTTGTT TERM 51 76428 - 76438 + G 74 -6.8 -4.32034 | opp_overlap 76414 GCAGCTCAAGGCGAA GCTG AAG CAGC TTTTGGTAATGATGG accC 75867 - 77216 + | acetyl-CoA carboxylase biotin carboxylase subunit P9301_00721 77540 - 77235 - | hypothetical protein P9301_00731 77631 - 77816 + | photosystem II protein X PsbX TERM 52 78719 - 78703 - g 95 -8.7 -5.1848 | AATCAAGCTAAAAAA CCACGAG AGT CTCGTAG AGTAAGCTCTTCAGC P9301_00741 77896 - 78825 + | hypothetical protein P9301_00751 79101 - 78826 - | high light inducible protein P9301_00761 81092 - 79110 - | ABC transporter, ATP binding protein TERM 53 79561 - 79571 + g 80 -5.4 -5.26875 | ATGAATAATAATTCC CCAA TTT TTGG TTTTTTAATTACACC TERM 54 80216 - 80226 + g 70 -4 -5.01732 | opp_overlap 80216 GTTGATCAAAGTCAA TCTT TAC AAGA TTTTTTCCAGCAATT P9301_00771 81413 - 81135 - | hypothetical protein hit 81801 - 81460 - | HIT (histidine triad) family protein def 82411 - 81806 - | peptide deformylase TERM 55 83974 - 83933 - g 74 -9.7 -2.77043 | gap 1, overlap 83932 83935 CTTATGATTGCAAAG CACTAGCT-CTTGAATTGAT TAA ATCAAATCAAGTAGATAGTG AAAAAGTGGTAATTT dap2 82492 - 84417 + | esterase/lipase/thioesterase family protein TERM 56 84439 - 84421 - T 73 -7.6 -3.7347 | opp_overlap 84421 TTGAATATTTAAGAA TTGATTTT TAG AAAATCAA TAGTATCTTTTAATT P9301_00811 85667 - 84414 - | putative cysteine desulfurase or selenocysteine lyase TERM 57 85233 - 85245 + g 72 -3.5 -5.14563 | TATACCTATAAATTT TAATT TGC AATTA TTTTTTGCTGCAACC P9301_00821 86884 - 85667 - | ABC transporter, membrane component TERM 58 86837 - 86851 + g 79 -3.6 -5.56112 | overlap 86837 86839 TTTTTGTATTTCTGT TTGATT ATC AATCGA TTTTTTGGTTTTTAT sufC 87674 - 86889 - | ABC transporter, ATP binding component P9301_00841 89194 - 87692 - | cysteine desulfurase activator complex subunit SufB TERM 59 88895 - 88905 + g 74 -4 -5.23316 | GTAATAAATAATATC TTGA TAA TCAA TTTTTTCATATCCTA TERM 60 89415 - 89404 - g 74 -2.2 -5.52079 | ATATCAAAATAAAAA TCCC CTGA GAGA ATGGTGTGATAACCA P9301_00851 89231 - 89584 + | hypothetical protein P9301_00861 89872 - 90957 + | hypothetical protein P9301_00871 90970 - 91140 + | membrane protein pgm 91173 - 92810 + | phosphoglucomutase TERM 61 92996 - 93012 + G 71 -3.1 -5.252 | overlap 92986 TGCAATACTAAACGA TAAGATT AGT AATTTTA TTTTTTCTGGCCCTC mgs1 92844 - 94133 + | recombination factor protein RarA P9301_00901 94813 - 94130 - | putative 4'-phosphopantetheinyl transferase family protein P9301_00911 94786 - 95253 + | putative bacterioferritin comigratory (BCP) protein P9301_00921 95940 - 95245 - | transcriptional regulator cysH 96678 - 95956 - | phosphoadenosine phosphosulfate reductase TERM 62 97102 - 97114 + G 85 -4.9 -5.60993 | TTATCTGTACAGGAT CTATT CCA AATAG TTTTTTTATAAAAGG P9301_00941 96774 - 97967 + | putative NADH dehydrogenase, transport associated TERM 63 98601 - 98617 + G 70 -8.1 -3.0471 | overlap 98598 98603 AATTCCTGTGTGGCT TATAGGT ACA ACCTATA TGATTCTATTTTCTG TERM 64 98947 - 98936 - g 77 -4.4 -5.20781 | TAGGAGAAAATAAAA CATC TTTT GATG GGGCTAATGTTTTCT citT 98017 - 99825 + | DASS family sodium/sulfate transporter TERM 65 100352 - 100371 + G 70 -4.3 -4.91873 | overlap 100353 ATTTTTCACAGCATT TCTGCAT ACAACA ATGCAGG TTTTTCGTTAATGTC trkG 99830 - 101233 + | Trk family sodium transporter P9301_00971 101252 - 101956 + | VIC family potassium channel protein P9301_00981 102265 - 101963 - | hypothetical protein P9301_00991 102383 - 102721 + | hypothetical protein P9301_01001 102756 - 102986 + | hypothetical protein P9301_01011 103140 - 102964 - | hypothetical protein TERM 66 103086 - 103075 - G 81 -4.4 -5.49809 | overlap 103082 CAAAGTCCAAAAAAA CCAA TAAC TTGG AATTGCAAGAGCAGC TERM 67 104159 - 104194 + G 85 -10.6 -3.39327 | overlap 104160 104163 CAAAAAGTCCTGTTT TTAATTTTCCAGAGTG CCCT CGCTCAGGAAAATTAG TTCTGAATATCAAAA TERM 68 104160 - 104193 + G 87 -11.9 -2.63382 | overlap 104159 104163 AAAAAGTCCTGTTTT TAATTTTCCAGAGTG CCCT CGCTCAGGAAAATTA GTTCTGAATATCAAA TERM 69 104163 - 104190 + G 78 -9.2 -3.46659 | overlap 104160 104159 AAGTCCTGTTTTTAA TTTTCCAGAGTG CCCT CGCTCAGGAAAA TTAGTTCTGAATATC TERM 70 104365 - 104345 - g 87 -5.5 -5.55664 | opp_overlap 104345 TCATTATGAAAAAAA TATCTCC TGAAATT GGAGATA TTAATCTTGGTAAAC P9301_01021 103213 - 104838 + | ABC transporter, ATP binding component P9301_01031 104950 - 105093 + | hypothetical protein TERM 71 105118 - 105137 + TF 71 -5.8 -4.58773 | opp_overlap 105118 TTATTTTGTAGATTA GTAATATC AGTT GGTATTAC TTTTAATTTAATAAA P9301_01041 106220 - 105099 - | serine protease TERM 72 105992 - 106012 + gF 100 -7.7 -5.45726 | opp_overlap 105997, overlap 105997 GGTCTATAAATAGTT GAGAATTTC TTG GAAATTTTC TTTTTTTAACATATC TERM 73 105997 - 106007 + gF 81 -4 -5.55855 | opp_overlap 105997, overlap 105992 ATAAATAGTTGAGAA TTTC TTG GAAA TTTTCTTTTTTTAAC P9301_01051 106081 - 106266 + | hypothetical protein P9301_01061 106394 - 106657 + | hypothetical protein P9301_01071 106680 - 107063 + | hypothetical protein TERM 74 107061 - 107071 + F 76 -2.6 -5.86061 | opp_overlap 107061 CTAAGACATGTTAAA TAAA AAA TTTA TTTTTTTTCATAAAA P9301_01081 107133 - 107279 + | high light inducible protein P9301_01091 107625 - 107284 - | hypothetical protein rbn 108551 - 107637 - | serum resistance locus BrkB-like protein P9301_01111 109442 - 108642 - | inositol monophosphate family protein P9301_01121 110872 - 109445 - | RND family outer membrane efflux protein P9301_01131 112277 - 110898 - | putative Fe-S oxidoreductase TERM 75 112153 - 112136 - G 72 -7.1 -3.82084 | opp_overlap 112135 CGTTAATACTAATAA TTGAATC ACCT GATTCAA ATCCTATTTCTTCAG P9301_01141 112456 - 113223 + | hypothetical protein nadB 113223 - 114890 + | L-aspartate oxidase P9301_01161 115815 - 114880 - | hypothetical protein TERM 76 115489 - 115509 + g 71 -7 -4.09739 | opp_overlap 115482 AAATACTAGCCACCA GAAAAACT TATTT AGTTTTTC TTTTGGGGAAATTAC P9301_01171 115920 - 117284 + | Fe-S oxidoreductase P9301_01181 117381 - 117289 - | hypothetical protein P9301_01191 117832 - 117446 - | hypothetical protein P9301_01201 119048 - 117894 - | hypothetical protein TERM 77 118344 - 118360 + g 74 -2.3 -5.54264 | overlap 118346 CCTCGAGCAATGCTG TTCATAA AAA TTATGCA TTTTTTTGAGTATTT P9301_01211 119716 - 119066 - | RibD/RibG domain-containing protein TERM 78 119191 - 119217 + g 70 -3.8 -5.09685 | overlap 119192 119194 119197 TCCATGTATATCTAC CTCCAATAATTC GTG GAATTATTGTAA TTTTTATATCTGTTA TERM 79 119192 - 119216 + g 70 -7.3 -3.64184 | overlap 119191 119194 119197 CCATGTATATCTACC TCCAATAATTC GTG GAATTATTGTA ATTTTTATATCTGTT TERM 80 119194 - 119214 + g 84 -9.9 -3.37568 | overlap 119192 119191 119197 ATGTATATCTACCTC CAATAATTC GTG GAATTATTG TAATTTTTATATCTG TERM 81 119589 - 119575 - G 70 -4.2 -5.00138 | opp_overlap 119575 119583 TACCTAAACCAAAAA TGGTGG CGT CAACCA TTGATAAGTTTTGAT P9301_01221 120639 - 119713 - | 6-pyruvoyl tetrahydropterin synthase TERM 82 119802 - 119816 + g 74 -6.4 -4.39748 | overlap 119799 CTGCAGCATTATTTG GACTCT CTT GGAGTC TTATTTTGTGTAATG aroK 120690 - 121247 + | shikimate kinase P9301_01241 121501 - 121244 - | hypothetical protein TERM 83 121529 - 121548 + G 76 -3.6 -5.41746 | overlap 121546 TCTTGGATTAATTCT TTGCTTGA TTTT TCAAGGAA TTTTTTTAGAAAATT P9301_01251 121503 - 122210 + | POLO box duplicated region P9301_01261 122922 - 122197 - | putative glutathione S-transferase P9301_01271 123131 - 122949 - | hypothetical protein P9301_01281 122977 - 123186 + | hypothetical protein TERM 84 123269 - 123286 + G 79 -8.5 -3.80551 | opp_overlap 123269 GAATGATTTGGAAAA TGATCTC ATTA GAGATCA TTTCGTCAATATTTC TERM 85 123286 - 123269 - g 82 -8.5 -4.12902 | opp_overlap 123269 GAATGATTTGGAAAA TGATCTC ATTA GAGATCA TTTCGTCAATATTTC rbfA 123186 - 123578 + | ribosome-binding factor A hemD 123565 - 124362 + | putative uroporphyrinogen III synthase P9301_01311 124825 - 124355 - | putative integral membrane protein crtQ 126283 - 124829 - | zeta-carotene desaturase TERM 86 125408 - 125418 + g 76 -5.4 -5.08831 | opp_overlap 125408 TTTAAATTGATACCA TTCC TTG GGAA TTATTTTTTTTATTC P9301_01331 126383 - 126775 + | hypothetical protein P9301_01341 126782 - 127210 + | hypothetical protein TERM 87 127662 - 127632 - g 71 -7.8 -3.53444 | opp_overlap 127632 CCATGGCCTTCTAAA TTTTTCTTGCTCTC ACA AAAAGCAAAAAAAA TATATACGAGAGATT P9301_01351 127212 - 128414 + | hypothetical protein TERM 88 128457 - 128440 - g 72 -5.7 -4.41817 | opp_overlap 128440 128454 CAAAATAAGTTAAAA CAAATTA TCGA TAATTTG TTATTAATAAATTTA P9301_01361 128407 - 128676 + | hypothetical protein P9301_01371 129553 - 128627 - | putative cell division inhibitor P9301_01381 129690 - 129926 + | hypothetical protein P9301_01391 130614 - 129937 - | putative heat shock protein DnaJ P9301_01401 131599 - 130631 - | O-acetylserine (thiol)-lyase A P9301_01411 131753 - 132025 + | hypothetical protein P9301_01421 132034 - 132708 + | ABC transporter ATP-binding protein TERM 89 132857 - 132872 + F 100 -9 -5.72616 | opp_overlap 132857 GAAAAGTCATACAAA GTCACC CTTA GGTGAC TTTTTTTATGTCAGT TERM 90 132872 - 132857 - f 82 -9 -4.12901 | opp_overlap 132857 GAAAAGTCATACAAA GTCACC CTTA GGTGAC TTTTTTTATGTCAGT TERM 91 133045 - 133026 - f 84 -5 -5.80248 | opp_overlap 133037, overlap 133018 TAAGACATAAAAAAA GACCCCTA TTTC TAGAGATC TTTTTCTGGTTTTAC TERM 92 133757 - 133768 + G 74 -5.8 -4.65153 | TTATTGATGCTTTTG CTCC TATT GGAG TTTTAATTTATCTAA P9301_01431 133396 - 133845 + | hypothetical protein TERM 93 133862 - 133852 - g 79 -2.6 -5.73672 | AAAGAATGAAAAAAA TATT TTT AATA AGTCTATTTTTTGCT P9301_01441 133842 - 134201 + | hypothetical protein P9301_01451 134201 - 134866 + | hypothetical protein TERM 94 135033 - 135051 + T 100 -8.2 -5.85425 | opp_overlap 135027 135033, overlap 135040 AAAAAGTTATCCAAA GTCACTTT AAA AAGGTGAC TTTTTTATTTCTTTG P9301_01461 135697 - 135338 - | signal peptide binding domain-containing protein rpaA 136104 - 136886 + | two-component response regulator holB 137851 - 136889 - | DNA polymerase III subunit delta' tmk 138486 - 137848 - | thymidylate kinase zntA 140781 - 138487 - | putative P-type ATPase transporter for copper P9301_01511 140903 - 141424 + | photosystem I assembly protein Ycf3 sms 142781 - 141429 - | DNA repair protein RadA P9301_01531 142889 - 143635 + | two-component response regulator TERM 95 144573 - 144563 - g 87 -5.4 -5.68023 | TTACAAGTAAAAAAA CCAA GAA TTGG ACTTTTAAATATCGG plsX 143636 - 145054 + | putative glycerol-3-phosphate acyltransferase PlsX fabH 145108 - 146115 + | 3-oxoacyl-(acyl carrier protein) synthase III fabD 146130 - 147026 + | malonyl coenzyme A-acyl carrier protein transacylase TERM 96 147369 - 147356 - g 70 -3.9 -5.11613 | opp_overlap 147356 ACAGCATGTAAAAAA TTATC AAAT GATAA TTGTATTGGAATTTT P9301_01571 147032 - 147652 + | putative 1-acyl-sn-glycerol-3-phosphate acyltransferase P9301_01581 148310 - 147657 - | hypothetical protein ycf34 148571 - 148320 - | putative Ycf34 P9301_01601 148586 - 149803 + | poly A polymerase family protein P9301_01611 149862 - 150281 + | RNA recognition motif-containing protein crtB,pys 151190 - 150282 - | squalene and phytoene synthase TERM 97 151124 - 151135 + g 74 -5.8 -4.65933 | AGTAAAAGGTTTTAG CCCA CTTT TGGG TTTCTTTTCGGCATA pds 152631 - 151231 - | phytoene desaturase TERM 98 152890 - 152880 - g 70 -4 -4.96996 | TCTAAACAAAATAAA TGAA AAA TTCA ATGGATTAATAAAAG P9301_01641 152722 - 153069 + | NADH dehydrogenase I subunit M P9301_01651 153141 - 153689 + | hypothetical protein rbcR 154640 - 153696 - | putative Rubisco transcriptional regulator P9301_01671 154724 - 155452 + | hypothetical protein TERM 99 156274 - 156307 + G 74 -6.7 -4.30719 | opp_overlap 156306, overlap 156276 156276 GCCAATTTCTGCACT TATCCATGCTGCAAC AATG GTTGCAGCAGGAATC TTTCTTGTAGCAAGA TERM 100 156276 - 156304 + G 90 -12.6 -2.85008 | gap 1, overlap 156276 156274 CAATTTCTGCACTTA TCCATGCTGCAAC AATG GTTGCAGCA-GGA ATCTTTCTTGTAGCA TERM 101 156276 - 156305 + G 80 -9.3 -3.75817 | overlap 156274 156276 CAATTTCTGCACTTA TCCATGCTGCAAC AATG GTTGCAGCAGGAA TCTTTCTTGTAGCAA ndhF 155486 - 157507 + | NAD(P)H-quinone oxidoreductase subunit F TERM 102 158994 - 158972 - g 84 -10.8 -3.08813 | opp_overlap 158971, overlap 158974 TTCTATGTTAAGAGA GATTTTCTTT GGT AAAGAAAATC CTAAATTAATCGAAG P9301_01691 157638 - 159233 + | NAD(P)H-quinone oxidoreductase subunit 4 P9301_01701 159357 - 160178 + | hypothetical protein TERM 103 160740 - 160723 - g 88 -8.5 -4.49364 | AAATGGAAGAATAAA GGCTTTT CAGG AAAAGCC AACAGTTGATCAAGC TERM 104 160789 - 160802 + G 74 -5.3 -4.88407 | TACAGGAATTTATCT TTTCG AACC CGAAA TTTTTAATTACATAC P9301_01711 160226 - 161404 + | putative sugar-phosphate nucleotidyl transferase metF 162278 - 161388 - | methylenetetrahydrofolate reductase csgD 162356 - 162634 + | LuxR family regulatory protein P9301_01741 162785 - 162597 - | hypothetical protein P9301_01751 163349 - 162852 - | hypothetical protein ppnK 164261 - 163350 - | inorganic polyphosphate/ATP-NAD kinase TERM 105 163452 - 163463 + g 72 -3.6 -5.21709 | TTTTATTATTTTGCA GGGT GATT GCCC TTTTTTGATCTCACA ndhE 164591 - 164271 - | NADH dehydrogenase subunit K ndhG 165209 - 164610 - | NADH dehydrogenase subunit J ndhI 165849 - 165223 - | NADH dehydrogenase subunit I TERM 106 165338 - 165350 + g 72 -9.1 -2.72511 | overlap 165337 CTTGGGACTTCATGA GGGTC CAT GACCC CTTTAGGAAGATAGG ndhA 167036 - 165918 - | NADH dehydrogenase subunit H gltA 168257 - 167112 - | methylcitrate synthase TERM 107 168121 - 168103 - G 71 -8.2 -3.22877 | opp_overlap 168103 168108 CAAATCAATAGGTAA GCAGTTTC TAA AAAACTGC TTTTTTGGGATAGTT TERM 108 168103 - 168121 + g 89 -7.5 -5.07053 | opp_overlap 168103, overlap 168108 CAAATCAATAGGTAA GCAGTTT CTAAA AAACTGC TTTTTTGGGATAGTT P9301_01821 169843 - 168383 - | hypothetical protein TERM 109 169841 - 169851 + g 74 -4 -5.21459 | TATTACTCTAAGTTT CATT ATC AATG TTTATTTTTATTTTT pspE 169933 - 170283 + | rhodanese-like protein trpB 171528 - 170284 - | tryptophan synthase subunit beta TERM 110 171458 - 171471 + g 73 -8.1 -3.55122 | opp_overlap 171454, overlap 171454 TATTTTCCAAATCTT CCCTC TTTA GAGGG TTGATTTAAATCGTC sui1 171577 - 171888 + | translation initiation factor SUI1 cysC 171931 - 172554 + | adenylylsulfate kinase purE 173060 - 172569 - | phosphoribosylaminoimidazole carboxylase TERM 111 173688 - 173678 - g 77 -4 -5.38326 | opp_overlap 173678, overlap 173672 TTAAGCAAAGAAAAA CTAA TCG TTAG CTTTGCTCCTTATAC chlM 173195 - 173893 + | Mg-protoporphyrin IX methyl transferase P9301_01891 174626 - 173898 - | two-component response regulator P9301_01901 174686 - 175831 + | NifS-like aminotransferase class-V P9301_01911 176747 - 175845 - | S-adenosylmethionine-dependent methyltransferase TERM 112 176458 - 176438 - G 77 -9.9 -2.73468 | opp_overlap 176443, overlap 176443 CAAGATCTGCAATCA CAAAAGAAA CTT TTTCTTTTG GTACAAAATCCGCAA ndhH 176786 - 177973 + | NAD(P)H-quinone oxidoreductase subunit H P9301_01931 177983 - 178435 + | thioesterase menE 179641 - 178439 - | putative O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase) menC 180603 - 179638 - | putative O-succinylbenzoate synthase menA 181517 - 180600 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 113 180671 - 180687 + g 74 -3 -5.4505 | opp_overlap 180681 GCGTTTGAAACTTTA TTGCGA TGAAT TTGCAA TTTTTTATTGCAGAA TERM 114 182172 - 182144 - g 80 -9.1 -3.66017 | opp_overlap 182152, overlap 182140 182145 ACAATTAGAAATCAA GTTATTAATTCTG GTT CAGAATTAATAAA ATCATCTGGCCTAAA TERM 115 182171 - 182145 - g 89 -12.6 -2.78526 | opp_overlap 182152, overlap 182144 182140 CAATTAGAAATCAAG TTATTAATTCTG GTT CAGAATTAATAA AATCATCTGGCCTAA TERM 116 182434 - 182464 + G 75 -4.8 -5.05113 | opp_overlap 182436, overlap 182437 182456 AAGGAATAGTAAGGA TATTTTGTTTGGAG CAT CTCCAGAAAAATTA TTTTCTTTCTCTAAA TERM 117 182437 - 182461 + G 76 -6.5 -4.60302 | opp_overlap 182436, overlap 182434 182456 GAATAGTAAGGATAT TTTGTTTGGAG CAT CTCCAGAAAAA TTATTTTCTTTCTCT menF 181619 - 183031 + | isochorismate synthase gshB 183947 - 183024 - | glutathione synthetase grxC 184207 - 183953 - | glutaredoxin TERM 118 184940 - 184928 - g 89 -9.1 -4.45771 | ATGGCAAAAGACAAA CCAGC TTT GCTGG GGTAGAGGTTATGCC prfB 184342 - 185406 + | peptide chain release factor 2 P9301_02011 185410 - 185592 + | hypothetical protein TERM 119 185626 - 185612 - g 83 -4.4 -5.68438 | opp_overlap 185612 GTATGAAAGAAAAAA TTATTT CTG AAATAA GTTTAGATTTGGTTT P9301_02021 185599 - 186138 + | metal-dependent hydrolase dgkA 186145 - 186555 + | diacylglycerol kinase pabA 186568 - 187164 + | para-aminobenzoate synthase component II P9301_02051 187185 - 187910 + | Zn-dependent hydrolase P9301_02061 189016 - 187907 - | aminotransferases class-I TERM 120 188208 - 188221 + g 71 -8.1 -3.21395 | opp_overlap 188195 GATTTGTCTTTAAGT GCTGC TAAT GCAGC TGTTATAGCAAAGCT argS 190830 - 189016 - | arginyl-tRNA synthetase nadC 191724 - 190858 - | nicotinate-nucleotide pyrophosphorylase:quinolinate phosphoriobsyl transferase TERM 121 191601 - 191623 + g 72 -3.4 -5.20781 | overlap 191603 ATATTCCCTCCTCTT TAGCAATCCA ATA TGCATTGCCA TTTTCTTTTGTAATA trmE 193185 - 191803 - | tRNA modification GTPase TrmE P9301_02101 193252 - 193695 + | hypothetical protein spoT 196023 - 193714 - | guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase TERM 122 195249 - 195269 + g 84 -5.5 -5.4251 | opp_overlap 195249 AGTTTTCCTTCATAA GATTCAAAG TTA CTTTTAATC TTTTTTCTCTATCAC TERM 123 195845 - 195856 + g 71 -3 -5.20222 | TTTACTATAAGGTTT TGAT TTTC ATCA TTTTCTTTATTTGAT TERM 124 196876 - 196856 - g 71 -5.5 -4.60924 | TAAATGCTTCAAAAA TAGTATTAG AAC CAAATACTA AAAATAATGCTCAAG TERM 125 197146 - 197136 - g 79 -2.6 -5.81412 | TGCATCGAAAAAAAA TAAA TAT TTTA AAAAGAACAATAAAG P9301_02121 196078 - 197676 + | ABC transporter ATP-binding protein rluD 198628 - 197669 - | putative pseudouridylate synthase specific to ribosomal large subunit rbgA 199491 - 198619 - | ribosomal biogenesis GTPase pgk 199705 - 200913 + | phosphoglycerate kinase P9301_02161 201640 - 200915 - | hypothetical protein TERM 126 202067 - 202079 + G 72 -2.7 -5.38047 | TTCCAGGAATGGTAA CTAAA AAT TTTGG TTTTTTATGTAACTA murG 201682 - 202773 + | undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase P9301_02181 203876 - 202752 - | aminotransferases class-I pyrD 205063 - 203894 - | dihydroorotate dehydrogenase 2 rnhA 205789 - 205070 - | ribonuclease HI TERM 127 205789 - 205831 + r 84 -9.4 -3.7645 | opp_overlap 205792, overlap 205792 TACAATCAATATTCA TAATTTTTGAAGCCGATATA AAG TCTATCGGCTTGAAAAAATA TTCTCTTACTTAAGT TERM 128 205828 - 205792 - R 93 -11.1 -3.43618 | opp_overlap 205789 205792 AATCAATATTCATAA TTTTTGAAGCCGATATA AAG TCTATCGGCTTGAAAAA ATATTCTCTTACTTA TERM 129 205792 - 205828 + r 83 -11.1 -2.66822 | opp_overlap 205792, overlap 205789 AATCAATATTCATAA TTTTTGAAGCCGATATA AAG TCTATCGGCTTGAAAAA ATATTCTCTTACTTA rplL 206232 - 205837 - | 50S ribosomal protein L7/L12 rplJ 206788 - 206261 - | 50S ribosomal protein L10 rplA 207686 - 206979 - | 50S ribosomal protein L1 rplK 208178 - 207753 - | 50S ribosomal protein L11 nusG 208857 - 208246 - | transcription antitermination protein NusG secE 209151 - 208909 - | preprotein translocase subunit SecE clpB2 211970 - 209214 - | putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB TERM 130 210502 - 210515 + g 70 -3.9 -5.10208 | GCCTCTGATTGTTGT CTATT ATTC AATAG TTTTTCTTGAGCTTC eno 212228 - 213520 + | enolase P9301_02291 215192 - 213525 - | putative kinase TERM 131 214794 - 214822 + g 77 -7.6 -3.97911 | gap 1, overlap 214797 214798 ATGAACCTGAGCTAG TGAT-GCTGATCC AACC GGATCAGCTATTA TTTGATCTATTTCAT TERM 132 214797 - 214819 + g 74 -7.1 -4.09503 | gap 1, overlap 214794 214798 AACCTGAGCTAGTGA T-GCTGATCC AACC GGATCAGCTA TTATTTGATCTATTT TERM 133 214798 - 214817 + g 95 -12.2 -3.62041 | overlap 214797 214794 ACCTGAGCTAGTGAT GCTGATCC AACC GGATCAGC TATTATTTGATCTAT P9301_02301 215506 - 215189 - | hypothetical protein TERM 134 216161 - 216177 + G 72 -5.1 -4.84359 | GGAGTAAGTTATTGT GCTACAT GTG ATGGAGC TTTTTATAAAAATAG P9301_02311 215756 - 216712 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase P9301_02321 217017 - 216730 - | hypothetical protein P9301_02331 218012 - 217014 - | putative sodium-dependent bicarbonate transporter P9301_02341 217867 - 218022 + | hypothetical protein P9301_02351 219671 - 218019 - | putative sulfate transporter hemB 219896 - 220897 + | delta-aminolevulinic acid dehydratase P9301_02371 220960 - 221346 + | glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein TERM 135 221864 - 221877 + G 70 -3.9 -4.96848 | opp_overlap 221860, overlap 221860 GTAATGAACTATCTA TTCTT AGAA AAGAA TTTTTATCTAAGAAA TERM 136 222673 - 222689 + G 84 -10.9 -3.04792 | opp_overlap 222671 TTGCTAGATGAGATT GGATCTG GTA CAGATCC TCTTGAAGGTAGTGC TERM 137 223029 - 223050 + G 74 -8.8 -3.33815 | opp_overlap 223029 GATTAAACAACAAAA TTCTGCAG AAGCTG CTGCAGAA TTGATTGCAAGGACT TERM 138 223050 - 223029 - g 95 -8.8 -5.02606 | opp_overlap 223029 GATTAAACAACAAAA TTCTGCAG AAGCTG CTGCAGAA TTGATTGCAAGGACT P9301_02381 221362 - 223773 + | DNA mismatch repair protein MutS family protein obgE 223814 - 224797 + | GTPase ObgE P9301_02401 224884 - 225066 + | hypothetical protein TERM 139 225103 - 225089 - T 100 -10 -6.08342 | opp_overlap 225089 CAAGAAATAAAAAAA GGGCTT CAA AAGCCC TTTTTTTTATGCATT TERM 140 225089 - 225103 + T 100 -10 -5.97575 | opp_overlap 225089 CAAGAAATAAAAAAA GGGCTT CAA AAGCCC TTTTTTTTATGCATT P9301_02411 225356 - 225138 - | hypothetical protein ecm4 226429 - 225476 - | glutathione S-transferase C terminus aspA 226447 - 227352 + | aspartoacylase P9301_02441 227598 - 227470 - | hypothetical protein TERM 141 227728 - 227743 + H 100 -7.6 -5.27938 | overlap 227721 CTAAAATCTTCGAAG CGGAAA TTTT TTTCCG TTTTTATTTACACGT TERM 142 228489 - 228473 - g 76 -7.3 -4.18421 | TAATCAGAGAAACAA CTGAGAC AGA ATCTCAG AACTATGGTTACAAG psbA 227788 - 228870 + | photosystem II PsbA protein (D1) TERM 143 228911 - 228894 - f 87 -9.8 -3.47349 | opp_overlap 228894 TTCTTAAACTCACAA GCCCCC TTTTTT GGGGGC TTTTTTTTGTTTAAT TERM 144 228894 - 228911 + F 100 -9.8 -6.25578 | opp_overlap 228894 TTCTTAAACTCACAA GCCCCC TTTTTT GGGGGC TTTTTTTTGTTTAAT TERM 145 229496 - 229484 - g 76 -6.3 -4.62441 | TCTGATATAAATAAA GAGAA GAT TTCTC TCAAAAAAATAGATT TERM 146 229652 - 229686 + G 71 -6.6 -3.97308 | overlap 229680 GGTCTTGGAATGCCT GTTTTTGATAAATTAG AAG CTGATTTAGCAAAGGC TTTGATGTCTTTGCC aroC 228980 - 230077 + | chorismate synthase eda 230738 - 230112 - | 2-keto-3-deoxy-6-phosphogluconate aldolase TERM 147 230140 - 230150 + g 90 -4 -5.95286 | AGCCATTCAAATATT TTTG GAT CAAA TTTTTTATTTTTGAT P9301_02481 232612 - 230759 - | cell division protein FtsH2 met3 233833 - 232658 - | ATP-sulfurylase TERM 148 233750 - 233762 + g 72 -3.5 -5.27477 | overlap 233736 TTTAAAGCTATTATC TTTAA TTA TTAAA TTTTTTAGTTCCCCT TERM 149 233886 - 233871 - R 100 -5.4 -6.34424 | gap 1, opp_overlap 233872 233873, overlap 233873 TTTTGAAAAAAAAAA GAGGGGT GGA ACCCC-C TTTTATTTATTAATT TERM 150 233872 - 233886 + r 78 -5.6 -5.13527 | opp_overlap 233871 233873, overlap 233873 TTTGAAAAAAAAAAG AGGGGT GGA ACCCCC TTTTATTTATTAATT TERM 151 233885 - 233873 - R 93 -9.1 -4.82685 | opp_overlap 233872 233873, overlap 233871 TTGAAAAAAAAAAGA GGGGT GGA ACCCC CTTTTATTTATTAAT TERM 152 233873 - 233885 + r 79 -9.1 -3.65676 | opp_overlap 233873 233871, overlap 233872 TTGAAAAAAAAAAGA GGGGT GGA ACCCC CTTTTATTTATTAAT psbO 234746 - 233907 - | photosystem II manganese-stabilizing protein TERM 153 234920 - 234904 - R 73 -5.3 -4.74406 | opp_overlap 234904 ACAAAAAAATACAAA TAAAAAA TTT TTTTTTA TTTTTTTAATGAAAT TERM 154 234904 - 234920 + r 82 -5.3 -5.52986 | opp_overlap 234904 ACAAAAAAATACAAA TAAAAAA TTT TTTTTTA TTTTTTTAATGAAAT dfp 236174 - 234918 - | putative p-pantothenate cysteine ligase and p-pantothenenoylcysteine decarboxylase TERM 155 235054 - 235041 - G 79 -6.7 -4.56775 | overlap 235048 ATTTTGTGCCAAAAA GCCAA ATCC TTGGC CTTCAAGATCTATTG P9301_02521 236385 - 236164 - | hypothetical protein P9301_02531 236605 - 236805 + | hypothetical protein P9301_02541 236817 - 237158 + | hypothetical protein pyrB 238177 - 237161 - | aspartate carbamoyltransferase catalytic subunit P9301_02561 238605 - 238198 - | methylpurine-DNA glycosylase (MPG) gatC 238954 - 239247 + | aspartyl/glutamyl-tRNA amidotransferase subunit C P9301_02581 239974 - 239249 - | Beta-carotene hydroxylase TERM 156 239570 - 239593 + g 71 -5.4 -4.70887 | ATTCATAAATTTGCT TGGATAAACT CGAG AATTTATCCA TTTATTTCTTGATCG P9301_02591 240592 - 241041 + | hypothetical protein TERM 157 243356 - 243380 + G 74 -5.9 -4.66264 | opp_overlap 243372, overlap 243371 243372 TCAAATATCAAACGC TTATGAAAATT ATG AATTTTCAAAA TTTTTCCAAATTTTG ileS 241161 - 244067 + | isoleucyl-tRNA synthetase P9301_02611 244399 - 244064 - | hypothetical protein P9301_02621 244982 - 244359 - | hypothetical protein TERM 158 244844 - 244832 - GH 76 -3.4 -5.49579 | TTATAAAAAATAAAA TGGA TACTT TCCA ATAAATTGATAGAAG trmB 245105 - 245734 + | tRNA (guanine-N(7))-methyltransferase P9301_02641 247094 - 245742 - | phosphotransferase superclass TERM 159 246750 - 246772 + g 80 -6.4 -4.88388 | opp_overlap 246749 246750 AAAGATTTTAGTAAT TTTTTGACCA TTA TGATCAAAAA TTTTTATGCCATTAT TERM 160 246966 - 246981 + g 88 -6.2 -5.45802 | AATTCTTGTATCTCT TCCAAT TAAT ATTGGA TTTTTATTTTCCAAA TERM 161 247027 - 247015 - G 71 -7.7 -3.48288 | overlap 247012 GAACCTAGAGCATAA CCTAC TTT GTAGG CTAGAGAATAAGTTA P9301_02651 247317 - 247778 + | thioredoxin-like protein TxlA thyX 248414 - 247782 - | FAD-dependent thymidylate synthase TERM 162 248354 - 248368 + g 77 -4.3 -5.28176 | GGTTACTAACTCTTG CAATG TAAGC CATTG TTTTTTCTGCATCAG dcd 249009 - 248416 - | deoxycytidine triphosphate deaminase TERM 163 248727 - 248702 - G 73 -8.4 -3.53811 | gap 1, overlap 248703 TTCATCTTTTCTAAA GC-CACTCCTA AACCA TAGGAGTGAGC AGGAAGAATAAAAAA P9301_02681 249595 - 249014 - | cob(I)alamin adenosyltransferase ntcA 249795 - 250529 + | CRP family global nitrogen regulatory protein P9301_02701 250569 - 251534 + | hypothetical protein P9301_02711 251535 - 251972 + | hypothetical protein P9301_02721 252210 - 251953 - | hypothetical protein pth 252816 - 252220 - | peptidyl-tRNA hydrolase psbH 253154 - 252954 - | photosystem II reaction center protein H TERM 164 253129 - 253141 + g 75 -4.7 -5.03747 | opp_overlap 253127 253129 ATTGCTTTTAGAAGA CTGCC TAA GGCTG TTTTTTGACCCATTT P9301_02751 253342 - 253175 - | hypothetical protein psbN 253233 - 253385 + | photosystem II reaction center protein N psbI 253494 - 253622 + | photosystem II reaction center I protein I leuD 254883 - 254245 - | 3-isopropylmalate dehydratase small subunit leuC 256289 - 254886 - | isopropylmalate isomerase large subunit TERM 165 255360 - 255376 + g 72 -3.7 -5.30155 | opp_overlap 255361, overlap 255362 255365 GTCATCTGGGGACAA TTCTTCT AAA AGAGGGA TTTTTTGGTTGATGC cinA 257576 - 256302 - | molybdenum cofactor biosynthesis protein TERM 166 257151 - 257172 + g 79 -8.7 -3.93237 | gap 1, opp_overlap 257150, overlap 257152 TGGTTCCCATATCAT TCCT-GGGGC AGT GCCCCTAGGG TTATTAATTATTTGA TERM 167 257152 - 257171 + g 79 -10 -2.94858 | gap 1, opp_overlap 257150, overlap 257151 GGTTCCCATATCATT CCT-GGGGC AGT GCCCCTAGG GTTATTAATTATTTG glyA 258844 - 257573 - | serine hydroxymethyltransferase P9301_02821 259082 - 259333 + | hypothetical protein P9301_02831 259348 - 259632 + | hypothetical protein mviN 261219 - 259636 - | hypothetical protein TERM 168 260004 - 259979 - G 70 -6.3 -4.15543 | overlap 259982 GAAAGATTTCCAAAA TTATTAATTGG GGCA CCAATTAAAAA CCAATCAAAAAAAAT TERM 169 260001 - 259982 - G 70 -8 -3.09272 | overlap 259979 AGATTTCCAAAATTA TTAATTGG GGCA CCAATTAA AAACCAATCAAAAAA sfsA 261290 - 262030 + | putative sugar fermentation stimulation protein TERM 170 262156 - 262200 + F 100 -6.7 -6.22802 | opp_overlap 262173 GTTTTTTGAATAAAT TTAAATTTGAAAGGAAACAGT AAA ACTGTTTTTTTGCAGATCTAA TTTTTTTTTATGACC TERM 171 262241 - 262229 - g 78 -9.1 -3.53444 | CCACTGCTTTGCAAA CGCCT CAA AGGCG CTCTAGGTCCAAACT TERM 172 262624 - 262636 + G 71 -5.5 -4.65263 | TACGGAGGAAGTGTT GCCGA CGG TTGGC TTTATTTTGGCGGCT amtB 262210 - 263670 + | ammonium transporter TERM 173 263692 - 263715 + F 100 -14 -6.06723 | opp_overlap 263696 TGAAAATTGATTTTA GAAACCTGAC TTAT GTCAGGTTTC TTTTTTTTTACGAAA TERM 174 263711 - 263696 - f 81 -9 -3.9009 | opp_overlap 263692 AATTGATTTTAGAAA CCTGAC TTAT GTCAGG TTTCTTTTTTTTTAC TERM 175 264030 - 264005 - g 71 -7.8 -3.38535 | overlap 264003 TGAAACAAGAAGACA TTATCCAAAT GAGAAT ATTTGGATAA CTAACGAAATAATTC lytB 263760 - 264956 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase P9301_02881 265060 - 265620 + | hypothetical protein purH 267175 - 265622 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase P9301_02901 267209 - 267826 + | esterase P9301_02911 268191 - 267823 - | hypothetical protein P9301_02921 268444 - 269580 + | two-component sensor histidine kinase P9301_02931 270070 - 269558 - | cobalamin-5-phosphate synthase tgt 270397 - 271515 + | tRNA-guanine transglycosylase psbK 271549 - 271689 + | photosystem II reaction center protein K P9301_02961 272720 - 271716 - | putative oxidoreductase P9301_02971 272683 - 272796 + | hypothetical protein P9301_02981 274039 - 272771 - | hemolysin-like protein TERM 176 273988 - 273975 - G 71 -2.3 -5.5112 | overlap 273980 CTTATTAATAAAAAA GAGAG TTCA CTCGC TGCGAAAAAAGCTGG TERM 177 274804 - 274823 + G 72 -5.1 -4.92363 | opp_overlap 274804 274802 274798 274797 ATGTTAAATTAAAGA GTCTTTT TACAAT AAAAGAC TTTTTATAAATATTT pyrE 274272 - 274832 + | orotate phosphoribosyltransferase P9301_03001 274843 - 275679 + | GcvT-like aminomethyltransferase P9301_03011 277083 - 275665 - | RecB family nuclease TERM 178 275976 - 275996 + g 88 -7 -5.24449 | TAAAATTTAGGTTTT TAGCAATA TTAAT TATTGCTA TTTTTTCAGTTTCTC P9301_03021 277164 - 278618 + | phosphotransferase superclass TERM 179 279057 - 279071 + GT 89 -8.6 -4.57341 | GAGGAAAAAGTGGTT TTGGGT ATG ACCCAA TTTTTGAGGAGAGTT P9301_03031 278582 - 279196 + | xanthosine triphosphate pyrophosphatase P9301_03041 280683 - 279199 - | retinal pigment epithelial membrane protein TERM 180 279549 - 279512 - G 82 -7.9 -4.43477 | opp_overlap 279503 279502, overlap 279506 279514 GCCATCCAACTAAAA GTTGCTTTTAATCCTAA GTTT TTAGGATTAACAACAGC AAATTCACAACATTG TERM 181 279547 - 279514 - G 71 -9.1 -2.54881 | opp_overlap 279503 279502, overlap 279506 279512 CATCCAACTAAAAGT TGCTTTTAATCCTAA GTTT TTAGGATTAACAACA GCAAATTCACAACAT TERM 182 280358 - 280373 + g 79 -3.4 -5.68489 | CCAAAAACACCTCTA TAAATA AATT TATTTA TTTTTTCTTCTTCTA hisB 281359 - 280754 - | imidazoleglycerol-phosphate dehydratase fabI 282162 - 281380 - | enoyl-(acyl carrier protein) reductase P9301_03071 282268 - 282861 + | hypothetical protein degT 282915 - 284120 + | putative pleiotropic regulatory protein phrB 285541 - 284105 - | putative DNA photolyase P9301_03101 286101 - 285538 - | NUDIX hydrolase TERM 183 285848 - 285834 - G 76 -8.6 -3.4052 | opp_overlap 285818 285834 TTTTAATTGAATTAA TAGGTG TTT CACCTA TTTCTAATGTGCCTG TERM 184 285834 - 285848 + g 82 -8.6 -4.02334 | opp_overlap 285834, overlap 285818 TTTTAATTGAATTAA TAGGTG TTT CACCTA TTTCTAATGTGCCTG folK 286715 - 286149 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase chlD 286812 - 288947 + | protoporphyrin IX magnesium chelatase subunit ChlD P9301_03131 289800 - 288955 - | putative ABC transporter P9301_03141 290528 - 289806 - | ABC transporter ATP-binding protein TERM 185 290042 - 290026 - G 77 -8.1 -3.95584 | GTCTTATTAATTAAA TCTTCAA TTC TTGAAGA GGCAATGGGATCAAG P9301_03151 290725 - 292110 + | hypothetical protein ndhJ 292640 - 292107 - | NADH dehydrogenase subunit J TERM 186 292574 - 292586 + g 82 -7.7 -4.63863 | opp_overlap 292573 CTTTAGACAAAGATT GGCTT ATA AAGCC TTCTTTTTCTATTAA ndhK 293374 - 292640 - | NADH dehydrogenase subunit B ndhC 293741 - 293379 - | NADH dehydrogenase subunit A rub 293819 - 294247 + | putative rubredoxin P9301_03201 294257 - 295273 + | Ycf48-like protein TERM 187 295456 - 295472 + G 75 -9.5 -2.83371 | opp_overlap 295456 295467, overlap 295455 TCTTTGAAATAATCA CCAGTAT TAG ATACTGG ATTATTCATGCAGTA TERM 188 295472 - 295456 - g 76 -9.5 -3.02371 | opp_overlap 295456 295455, overlap 295467 TCTTTGAAATAATCA CCAGTAT TAG ATACTGG ATTATTCATGCAGTA psbE 295404 - 295658 + | cytochrome b559 subunit alpha psbF 295661 - 295807 + | cytochrome b559 subunit beta psbL 295819 - 295938 + | photosystem II reaction center L psbJ 295948 - 296145 + | photosystem II reaction center protein J P9301_03251 297082 - 296189 - | 5'-methylthioadenosine phosphorylase TERM 189 298143 - 298111 - g 93 -9.4 -4.61566 | overlap 298106 TTTTAAAGCATAAAA TTGATCTCAACTTT ATTAA AAAGTTCAGATCAA AAAGGCTAATTATGA P9301_03261 297093 - 299264 + | selenide,water dikinase P9301_03271 300512 - 299265 - | tRNA nucleotidyltransferase/poly(A) polymerase uvrD 302926 - 300518 - | UvrD/REP helicase P9301_03291 303155 - 302949 - | hypothetical protein cpeB 303336 - 303848 + | phycobilisome protein cpeS 304380 - 303832 - | phycoerythrin linker protein CpeS-like protein TERM 190 304001 - 304021 + gT 72 -8.5 -3.09834 | opp_overlap 304001 GTTTTAATGTGTAAA TTATTTTGT TCA ACAAAATAA TTGGATGATGAAATA TERM 191 304021 - 304001 - GT 77 -8.5 -3.60792 | opp_overlap 304001 GTTTTAATGTGTAAA TTATTTTGT TCA ACAAAATAA TTGGATGATGAAATA P9301_03321 304534 - 304355 - | hypothetical protein P9301_03331 305286 - 304651 - | hypothetical protein P9301_03341 305431 - 305850 + | Pollen allergen TERM 192 305968 - 305984 + T 72 -8.7 -2.62616 | TTGAACTGGGGACAC GGCGATT TTC AGTCGCC TGCTCTACCAACTGA xylB 307331 - 306102 - | carbohydrate kinase metK 308585 - 307344 - | S-adenosylmethionine synthetase rps1a 309811 - 308720 - | 30S ribosomal protein S1 P9301_03381 310399 - 309920 - | transcriptional regulator NrdR TERM 193 310501 - 310452 - R 72 -8.9 -2.75535 | opp_overlap 310469, overlap 310469 GTAATATCTTAATTA TGAAAAGTAAAAAAAAACCTCTT TAAC AAGAGGTTTTTTTTCAGAGTTCA TTTTCTATCGAATTT TERM 194 310484 - 310469 - R 100 -7.6 -6.31682 | opp_overlap 310469, overlap 310452 AAAAGTAAAAAAAAA CCTCTT TAAC AAGAGG TTTTTTTTCAGAGTT TERM 195 310469 - 310484 + r 100 -7.6 -5.77853 | opp_overlap 310452 310469 AAAAGTAAAAAAAAA CCTCTT TAAC AAGAGG TTTTTTTTCAGAGTT psbT 310597 - 310499 - | photosystem II reaction center protein T psbB 312144 - 310621 - | photosystem II PsbB protein (CP47) TERM 196 312053 - 312041 - G 83 -10.5 -3.10701 | overlap 312030 TAAAGAGCCATTGAA CCGGC CCA GCCGG CTAATAATGCAGTAT fdx 312367 - 312729 + | ferredoxin psbM 312834 - 312986 + | photosystem II reaction center M protein (PsbM) TERM 197 313009 - 313021 + G 71 -2 -5.45802 | overlap 313014 ATAAATGCTTTGCAT TTCT GTAAA AGAA TTTTTATTTTGGAAA hemK 312998 - 313867 + | putative protein methyltransferase sua5 313891 - 314472 + | putative translation factor (SUA5) P9301_03451 314473 - 314640 + | hypothetical protein minE 315123 - 314788 - | septum site-determining protein MinE minD 315940 - 315125 - | putative septum site-determining protein MinD minC 316714 - 316052 - | septum site-determining protein P9301_03491 317981 - 316725 - | HD superfamily phosphohydrolase TERM 198 317840 - 317852 + g 70 -4.1 -4.95547 | GAAAAAGTAATGATG CAGCT CCT AGTTG TTTTATTCTTCTAAG P9301_03501 319304 - 318018 - | carboxyl-terminal protease petB 319375 - 320031 + | cytochrome b6 TERM 199 320095 - 320082 - g 74 -3.1 -5.44119 | overlap 320083 TCTACGTTAAAAAAA CCAGA TTTA TCTGA TCCAAAATTAAGAGC petD 320064 - 320546 + | cytochrome b6-f complex subunit IV P9301_03531 321988 - 320549 - | putative neutral invertase-like protein TERM 200 320941 - 320960 + g 76 -9.4 -3.14745 | overlap 320939 GACAAATTCTCATGG GCATTTGA GCCA TCAAATGC TGTCTGTTATGCAAA TERM 201 321465 - 321454 - G 73 -4.4 -5.08088 | AATCTGGAACAAAAA GTAC TGGA GTAC CCTCAAATGTTGGAT P9301_03541 322360 - 322229 - | hypothetical protein TERM 202 323709 - 323689 - R 75 -8.2 -3.53733 | GGCACTCTAGAAAGA CCGCCGGT GATAA ACCGGAGG AAGGTGTGGATGACG TERM 203 324059 - 324040 - R 75 -9.2 -2.65808 | overlap 324036 324037 AGTCGTAACAAGGTA GCCGTACC GGAA GGTGCGGC TGGATCACCTCCTAA TERM 204 324463 - 324424 - R 83 -9.4 -3.64682 | opp_overlap 324423 324426, overlap 324416 324427 GATCAAATTCTGAAA GAATCTAGCTTCCTAATG AAAT CATTAAGATGCTGGACTC ATTGAATTAATTTCA TERM 205 324460 - 324427 - R 75 -7.5 -3.95071 | opp_overlap 324426 324423, overlap 324424 CAAATTCTGAAAGAA TCTAGCTTCCTAATG AAAT CATTAAGATGCTGGA CTCATTGAATTAATT TERM 206 324597 - 324611 + r 70 -7.2 -3.72324 | TCTATTAAGCTGATG CTTCAA TTT TTGAAG TTATTGGTCAAGCTA TERM 207 324896 - 324877 - R 91 -10.8 -3.76413 | opp_overlap 324876 324875 GGGGAAAAGCCCAAA CCGATAGT CTTG ACTATCGG GGTTGTGGGACAGCA TERM 208 325132 - 325121 - R 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACAT TERM 209 325919 - 325901 - R 70 -6 -4.21194 | CTTGAGTAGCGAAAA CATGGG TGAGAAT CCCATG CCCCGAAACCCTAAG TERM 210 327365 - 327353 - R 75 -9.1 -3.1634 | GCTGAAAGCATCTAA GTGGG AAG CCCAC CTCAAGATGAGTATT TERM 211 327712 - 327688 - R 82 -8.6 -4.37991 | opp_overlap 327688, overlap 327679 TAAAAATATTTAAAA GGGTTTACTC TTCTT GAGTAAGCCC TTTTTTATTTTTGGC TERM 212 327688 - 327712 + r 100 -10.8 -5.93252 | opp_overlap 327688 327679 TAAAAATATTTAAAA GGGTTTACTC TTCTT GAGTAAGCCC TTTTTTATTTTTGGC mutM 328595 - 327717 - | formamidopyrimidine-DNA glycolase (Fapy-DNA glycolase) TERM 213 328258 - 328285 + g 76 -8.6 -3.38281 | opp_overlap 328258 TTTTTATCAAAAAAT CTTATTCTTGTA TGTT TACAAGGATGAG TTGAGTTTTCAATAA TERM 214 328524 - 328544 + g 72 -4.9 -4.8048 | overlap 328523 328525 ACAAACTTCTACTTT TTTAATAAT AAA ATTATTAAG TTTTTGCTCTAAACC psaE 328809 - 328600 - | photosystem I reaction center subunit IV P9301_03571 329651 - 328890 - | LysM domain-containing protein TERM 215 329667 - 329685 + r 72 -7.6 -3.61178 | AAAACTCACTATTTA TTTAAAGA TAA TCTTTAAA TTTAAAATCGCTAGG P9301_03581 331115 - 329724 - | putative aldehyde dehydrogenase TERM 216 330183 - 330193 + g 90 -4 -6.07374 | ACTAAAAGTCCCTCC GAAT AAA ATTC TTTTTTCTTTTTTAT TERM 217 330295 - 330265 - G 72 -9.2 -2.59742 | overlap 330264 330275 TCTAATTTTGATAAG TTTTCGGAAATAAT TGG ATTATCTCCGTAAA AACTTACTATGCATT TERM 218 330472 - 330498 + g 70 -3.8 -5.03715 | overlap 330467 ACAGGATTTGTTCCG CTTAACTCAA GAGTAAG TGGAGTTAAG TTTTTTGAAGCTAAT TERM 219 331052 - 331063 + g 91 -4.4 -5.96521 | TATCTTCAGTTTTAC CAGT CAGA ACTG TTTTTTTTAATTGAT P9301_03591 331273 - 332163 + | GCN5-related N-acetyltransferase P9301_03601 332504 - 332235 - | hypothetical protein TERM 220 332478 - 332463 - G 72 -4.7 -4.78077 | CTTAACGAAAAGAAA CTCAG GAGTCG CTGAG CTCATAATAAATAAA TERM 221 332514 - 332495 - G 73 -8 -3.43122 | opp_overlap 332494 332499, overlap 332494 TCATAATAAATAAAT TATAGTAC ATAA GTACTATA GTAAGTTATTAGCTT P9301_03611 332581 - 332673 + | hypothetical protein TERM 222 332910 - 332900 - T 73 -2.6 -5.79588 | opp_overlap 332900, overlap 332891 TCAAAATTAAAAAAA TTTT TAA AAAA TTAATAGAAATATTA P9301_03621 333082 - 332945 - | hypothetical protein P9301_03631 333447 - 333881 + | NADH-plastoquinone oxidoreductase chain 5-like protein P9301_03641 334387 - 333878 - | hypothetical protein P9301_03651 334543 - 334683 + | hypothetical protein P9301_03661 335265 - 334957 - | hypothetical protein P9301_03671 335566 - 335772 + | hypothetical protein P9301_03681 335863 - 336153 + | hypothetical protein P9301_03691 336368 - 336165 - | hypothetical protein TERM 223 336382 - 336366 - G 72 -3.7 -5.21236 | opp_overlap 336366, overlap 336368 AATTGATAAGAAAAA CATATAG GAG CTATAAG TTAAGTTTATGTTCA P9301_03701 338013 - 336484 - | phytoene dehydrogenase P9301_03711 338162 - 338052 - | hypothetical protein P9301_03721 338337 - 338822 + | hypothetical protein P9301_03731 339039 - 338824 - | hypothetical protein TERM 224 338965 - 338978 + g 74 -5.3 -4.75308 | opp_overlap 338965 ATCTGCTGTAGATAA TGAAG TAAC CTTCA TTTTTAAGTCTTCAT P9301_03741 339131 - 339448 + | helper component proteinase P9301_03751 339842 - 339450 - | hypothetical protein P9301_03761 340113 - 339847 - | mttA/Hcf106 family protein P9301_03771 340341 - 340204 - | hypothetical protein P9301_03781 340587 - 340757 + | hypothetical protein P9301_03791 340909 - 340778 - | hypothetical protein TERM 225 340861 - 340839 - G 76 -9.4 -3.08211 | overlap 340836 ACTTTTTTAAAATTA GTTATTTTTA AGT TAAAAATAAC TCCCAAAAAAAGGAT TERM 226 340925 - 340897 - G 87 -7.7 -4.74406 | opp_overlap 340900 ATAAAAAAATATAAA TTATTAATTCCAT ATT ATTGAATTAATAA ATTCACCATAGTTCA TERM 227 341054 - 341036 - H 90 -5.4 -5.93809 | TGGCCACAAAAAAAA CATATTAA CCT CTAATATG GAACTTTATAAGAAT TERM 228 341141 - 341158 + G 74 -5.5 -4.78984 | opp_overlap 341139 341141, overlap 341141 TTAAAAGATCAAATA GGGGTTT AAAA AATCCCC TTGTTTTGTTTTTTT P9301_03801 341074 - 341523 + | putative bacterioferritin comigratory protein P9301_03811 341607 - 341864 + | hypothetical protein TERM 229 341850 - 341869 + T 70 -5.2 -4.8066 | GAAAAGGAAATTTTA TTTTTTTA TGAC TAAAAAAA TTTTTAAATTATCTT P9301_03821 342307 - 341963 - | hypothetical protein TERM 230 342382 - 342395 + r 83 -3.9 -5.82036 | TAACCAACTAAAGGG TAAGA ACAT TCTTA TTTTTTCTTTATTGT TERM 231 342506 - 342490 - R 100 -10.9 -5.39221 | opp_overlap 342490 ATAAGAATTAAAAAA GACGGTT TTT AACCGTC TTTGAAAAAAGTAAT TERM 232 342490 - 342506 + r 95 -10.9 -3.5393 | opp_overlap 342490 ATAAGAATTAAAAAA GACGGTT TTT AACCGTC TTTGAAAAAAGTAAT P9301_03831 342887 - 342537 - | hypothetical protein TERM 233 343008 - 342991 - g 74 -5.7 -4.69027 | AAATGGATTTAAAAA TTACTAA AACG TTAGTAA TCCCATCCAATGAAA P9301_03841 342978 - 343406 + | hypothetical protein P9301_03851 343529 - 343726 + | TIR domain-containing protein P9301_03861 343918 - 343754 - | hypothetical protein P9301_03871 344841 - 343981 - | abortive infection protein TERM 234 344210 - 344175 - G 74 -7.8 -3.86733 | gap 1, opp_overlap 344187 344201 344203 ACCAAATACCAACAA GTCCTCCATG-AATTCC GAT GGAATTCCATAAAGAAC CTTTATCTCTAATTT TERM 235 344750 - 344727 - G 73 -4.5 -5.03961 | overlap 344728 AATTAAACAATAAAA GTGGCTGAG ACAAAG CCCAGCCAA TGCCATAAAGAATAG TERM 236 344749 - 344728 - G 75 -8 -3.59937 | overlap 344727 ATTAAACAATAAAAG TGGCTGAG ACAAAG CCCAGCCA ATGCCATAAAGAATA P9301_03881 345056 - 344859 - | hypothetical protein P9301_03891 345602 - 345745 + | hypothetical protein TERM 237 345865 - 345840 - f 82 -5.5 -5.59655 | CAAATTAAGAAAAAA GTAAATCAGCA TATT TACGGATTTAC TGAAAATATAAAAAG TERM 238 346167 - 346184 + F 100 -7 -6.15828 | opp_overlap 346161 346167 ATCAAATATCAAAAA GGACTG TATCCC CAGTCC TTTTTTTTTAATAAA TERM 239 346184 - 346167 - f 83 -7 -4.946 | opp_overlap 346167, overlap 346161 ATCAAATATCAAAAA GGACTG TATCCC CAGTCC TTTTTTTTTAATAAA P9301_03901 346265 - 347215 + | proline iminopeptidase TERM 240 347221 - 347209 - T 70 -6.3 -4.34711 | AAAAGGAATTCAAAA TCTCT AAA AGAGA AAATATTCCTTTAAA P9301_03911 347412 - 347239 - | hypothetical protein P9301_03921 349036 - 347540 - | putative deoxyribodipyrimidine photolyase TERM 241 349113 - 349097 - H 79 -3.8 -5.72118 | AAAAAATATAAAAAA TTTTAG AATAA CTAAAA ATCAAAAAAATGAAA P9301_03931 349123 - 349746 + | TENA/THI-4 protein TERM 242 350423 - 350413 - g 87 -5.4 -5.59879 | overlap 350416 TATAAATACAAAAAA TACC CAC GGTA GCGGCTGTACTTTGA thiD 349796 - 350575 + | phosphomethylpyrimidine kinase P9301_03951 350752 - 350594 - | hypothetical protein P9301_03961 350962 - 351105 + | hypothetical protein TERM 243 351372 - 351362 - g 79 -6.8 -4.73448 | AGAGAGATGCAAAAA GTGC TTG GCAC AGAGTAAAAAATGCT P9301_03971 351187 - 351654 + | hypothetical protein P9301_03981 351725 - 352102 + | phosphoenolpyruvate carboxykinase P9301_03991 352321 - 352139 - | hypothetical protein P9301_04001 352462 - 352815 + | hypothetical protein TERM 244 352847 - 352863 + F 100 -7.9 -5.27938 | overlap 352848 TGACAGTCGATCGCT AGGGGCT TTT AGCCCCC TTTTTATTTAGGAAT TERM 245 352848 - 352862 + F 95 -11.4 -3.75678 | overlap 352847 GACAGTCGATCGCTA GGGGCT TTT AGCCCC CTTTTTATTTAGGAA P9301_04011 352946 - 353293 + | hypothetical protein P9301_04021 353338 - 353622 + | hypothetical protein P9301_04031 354101 - 354403 + | hypothetical protein P9301_04041 354585 - 354400 - | hypothetical protein TERM 246 354490 - 354500 + g 74 -4 -5.1523 | TTTATAAGATTCAAT TTCA GCT TGAA TTTTTCTCTTGTAAA P9301_04051 354750 - 354613 - | hypothetical protein P9301_04061 355179 - 354976 - | hypothetical protein TERM 247 355286 - 355302 + H 83 -10.9 -2.62983 | opp_overlap 355298 TTGAACCCGAGACCT CTCCCTT ACC AAGGGAG TGCTCTACCGCTGAG aroQ 355519 - 355962 + | 3-dehydroquinate dehydratase miaE 355963 - 356571 + | putative tRNA-(MS[2]IO[6]A)-hydroxylase-like protein TERM 248 357295 - 357312 + G 72 -2.7 -5.43974 | opp_overlap 357295 TGCATCACAATATAA TAAGGAA TTTA TGCCTTA TTTTTCTTTGATTTT cobI/cbiL 356588 - 357343 + | precorrin-2 C20-methyltransferase P9301_04101 357343 - 357828 + | hypothetical protein TERM 249 358366 - 358382 + G 74 -9.5 -2.77192 | overlap 358365 358368 ATGGCTCAGGTACTG GAGATCT TTT AGATCTC GTTATTGGCGAACTT engA 357903 - 359276 + | GTP-binding protein EngA TERM 250 360148 - 360158 + G 76 -5.4 -5.06414 | ATCGATTTGTTTTAT TTGC ATA GCAA TTTTTCTTAGAAAAC cbiQ 359276 - 360190 + | cobalt ABC transporter permease P9301_04131 360209 - 360475 + | hypothetical protein P9301_04141 360479 - 361114 + | TIM-barrel fold family protein TERM 251 361725 - 361748 + G 75 -9.7 -2.87132 | opp_overlap 361716 361730, overlap 361716 361716 361727 361727 361727 TAACTAGTTCTTCCC CAGAAGAAG CTTCTC CTTCTTCTG TATCTACGGAAAAAA P9301_04151 361265 - 361840 + | hypothetical protein proC 361848 - 362660 + | Delta 1-pyrroline-5-carboxylate reductase P9301_04171 363823 - 362657 - | putative glycosyl transferase, group 1 TERM 252 363464 - 363482 + g 73 -7.5 -3.61468 | opp_overlap 363464, overlap 363460 AAATGGTGGATGAAA TGTTCCT ATAAG AGGAACA TTAATTTCATTACAA TERM 253 363482 - 363464 - G 73 -7.5 -3.73968 | opp_overlap 363464 363460 AAATGGTGGATGAAA TGTTCCT ATAAG AGGAACA TTAATTTCATTACAA recO 364693 - 363908 - | putative recombination protein O deoC 365353 - 364694 - | putative deoxyribose-phosphate aldolase lrtA 365945 - 365361 - | light repressed protein A-like protein TERM 254 365459 - 365474 + g 72 -4.8 -4.80178 | opp_overlap 365456, overlap 365456 CATAAAAATCATGAT CAATTA GATC TAATTG TTTTCTTGCTTCGTC TERM 255 365610 - 365622 + g 72 -4.9 -4.8384 | CATACTTTCAATTGG TAAAG AAT CTTTA TTTTTAAATTGTTTA lipB 365990 - 366640 + | putative lipoate-protein ligase B TERM 256 367428 - 367444 + G 77 -3 -5.52986 | opp_overlap 367428 GGCATTCTTATGAGA GAAGTG CTGAA TACTTC TTTTTTTCATGCGGT TERM 257 367605 - 367590 - g 77 -4 -5.40474 | overlap 367603 367604 AGGCTTTGAAAAAAA TGCCTT CCAA AAAGCA AAAACTTATTAAGTT TERM 258 367625 - 367603 - g 76 -6.4 -4.57341 | overlap 367590 367604 367610 AATGCCTTCCAAAAA GCAAAAACTT ATT AAGTTTTTGA TAAGTAATAGTTCGG TERM 259 367624 - 367604 - g 82 -9.9 -3.33922 | overlap 367590 367603 367610 ATGCCTTCCAAAAAG CAAAAACTT ATT AAGTTTTTG ATAAGTAATAGTTCG fadD 366668 - 368611 + | putative long-chain-fatty-acid--CoA ligase P9301_04231 368650 - 369093 + | hypothetical protein pdhC 369312 - 370679 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 260 370718 - 370738 + G 77 -7.7 -4.10437 | opp_overlap 370716 370718 370721 TAATGAAGAAAGAGA TTATAAGCT TGA AGCTTATGA TTATTTACTTGATCC TERM 261 371430 - 371406 - g 74 -8.7 -3.24 | overlap 371409 371411 AAACCAATTGATCAA GAAGATTTAAG TAA CTTAAAACTTC ACAAAGAATGGGTAA TERM 262 371765 - 371730 - g 100 -13.6 -5.252 | GATCTGTATAAAAAA GCCATAAAAGAAAAAT TTAG ATTCTTCTCTTATGGC GATGCGATGTATATT queA 370686 - 371810 + | queuosine biosynthesis protein P9301_04261 372799 - 371813 - | O-acetylserine (thiol)-lyase A TERM 263 372101 - 372114 + g 71 -5.3 -4.57353 | AGGAATAAATCCTGC TCCAA TTCC TTGGA TTTTATGTGGTCCGG P9301_04271 374353 - 372884 - | putative cystathionine gamma-synthase TERM 264 373219 - 373230 + g 85 -3 -5.98781 | TTTTAATCTCGCTAT GATT CTCT AATC TTTTTTTTAATTCTA TERM 265 373843 - 373853 + g 86 -4 -5.72254 | CAATTTTTGTAGATT TAGA AAT TCTA TTTTTTATTATTTGA TERM 266 374074 - 374088 + g 74 -7.2 -4.08651 | TATCAATGTATTTTT TAGCTT TAA AAGCTA TTCTTTCATTCGGAT metB 375520 - 374357 - | putative cystathionine gamma-synthase TERM 267 375577 - 375544 - R 100 -12.8 -4.18711 | opp_overlap 375549, overlap 375536 AAAATAAGAATTAAA TTAAATCTCTCTTT TTTTTT AAAGAGAGATTTAA TAATCCAAAGAAAAG TERM 268 375549 - 375572 + r 76 -8.3 -3.78775 | opp_overlap 375544 375536 AAGAATTAAATTAAA TCTCTCTTT TTTTTT AAAGAGAGA TTTAATAATCCAAAG rpsD 376206 - 375598 - | 30S ribosomal protein S4 P9301_04301 376302 - 376538 + | hypothetical protein P9301_04311 376543 - 376845 + | thioredoxin family protein TERM 269 377550 - 377537 - g 74 -3.9 -5.27938 | ATTTTCAAACAAAAA GAAAA TTGT TTTTC CCACCTTATTTAATA murE 376855 - 378390 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase P9301_04331 378472 - 379176 + | putative short chain dehydrogenase P9301_04341 380373 - 379201 - | putative L-cysteine/cystine lyase TERM 270 380392 - 380404 + r 79 -4.9 -5.52909 | AATTTATATTATATT TTCAA CTC TTGAA TTTTTTTAAATATTG P9301_04351 381204 - 380410 - | putative methyltransferase TERM 271 381235 - 381271 + r 100 -11 -3.97659 | opp_overlap 381245, overlap 381245 381263 CTTGATAAATATAGC CAAAAAAAAAGCCCCT GAAAA AGGGGCTTTTAATTTG TTTAATTAAATTATT TERM 272 381261 - 381245 - R 100 -9.4 -6.13 | opp_overlap 381235 381245 ATAGCCAAAAAAAAA GCCCCT GAAAA AGGGGC TTTTAATTTGTTTAA TERM 273 381245 - 381261 + r 93 -9.4 -4.72863 | opp_overlap 381245, overlap 381235 ATAGCCAAAAAAAAA GCCCCT GAAAA AGGGGC TTTTAATTTGTTTAA P9301_04361 381473 - 381282 - | hypothetical protein TERM 274 381548 - 381535 - H 78 -6.7 -4.86621 | AGGGTGAACGAAAAA GTAGC AATT GCTAC CAAATTATTATAAGC P9301_04371 381711 - 381968 + | hypothetical protein P9301_04381 382234 - 381989 - | NifU-like protein mqo 382305 - 383801 + | malate:quinone oxidoreductase lepA 383857 - 385665 + | GTP-binding protein LepA dppC 385834 - 386589 + | putative ABC transporter, oligopeptides P9301_04421 387263 - 386592 - | tRNA/rRNA methyltransferase (SpoU) P9301_04431 387360 - 387563 + | hypothetical protein TERM 275 387710 - 387692 - f 86 -4 -6.11644 | GTATTCAAAAAAAAA TTTTTTAT TCC ACAAAAAA GTTATTTAATTTCTA TERM 276 387772 - 387783 + G 72 -5.8 -4.41348 | CCTTCTTATTCGATG GTGG TTGT CCAC TTTGTTTGAGAGAAA P9301_04441 387741 - 388133 + | hypothetical protein P9301_04451 388136 - 388372 + | hypothetical protein P9301_04461 388422 - 388544 + | hypothetical protein P9301_04471 388504 - 389994 + | hypothetical protein TERM 277 390100 - 390087 - f 70 -3.9 -5.26316 | TTAGCTTAGAAAAAA TTAGA TTTA TCTAA TGGAAATTGGAACAC P9301_04481 390100 - 390279 + | hypothetical protein TERM 278 390332 - 390316 - g 71 -6.7 -4.02049 | GAAGTATCAAAAAGA GAAAAAA ATA TTTTTTC GGGAAAGAATCCATT P9301_04491 390299 - 390442 + | hypothetical protein TERM 279 390438 - 390451 + F 70 -2.5 -5.47431 | opp_overlap 390438 TAATTGAAAAAGTAG TTTAA ATTT TTAAA TTTTTTGTATATTAA TERM 280 391581 - 391571 - g 79 -2.6 -5.72053 | TAAGTAAAGAAAAAA TAAA ATC TTTA ACTTTATTGCAGGAA sun 390493 - 391809 + | Sun protein (Fmu protein) mrcB 393588 - 391819 - | putative penicillin binding protein TERM 281 393585 - 393561 - G 72 -5.9 -4.3534 | TTGGAATTATTAAAA CAAAAGATT TGAATTT AATCTTTTG CACCTTAAGCAACTA chlG 394537 - 393590 - | bacteriochlorophyll/chlorophyll a synthase P9301_04531 394770 - 394546 - | hypothetical protein hisF 394830 - 395600 + | imidazole glycerol phosphate synthase subunit HisF (cyclase) ubiE 395646 - 396347 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 282 396340 - 396356 + T 83 -3.8 -5.98675 | opp_overlap 396345 GAATACTAATTTTAA CTAAAT AAAGA ATTTAG TTTTTTATTTTTCTC P9301_04561 396814 - 396353 - | hypothetical protein birA 396914 - 397663 + | putative biotin--acetyl-CoA-carboxylase ligase salX 398352 - 397666 - | ABC transporter ATP-binding protein TERM 283 397886 - 397857 - G 89 -8.7 -4.63218 | gap 1 CGTCTGCTAACAAAA TTGCG-GGGTTATT GAT AATAGCCCTCGCAA TAGCAACTCGTTGTT ndhB 399889 - 398369 - | NAD(P)H-quinone oxidoreductase subunit 2 TERM 284 398742 - 398725 - G 82 -9.9 -3.1916 | overlap 398717 398736 CAAAAAATCCTAACA TTGGAGG TAAA CCTCCAA GAGATAGAAGACAAA TERM 285 400129 - 400105 - g 77 -8.7 -3.75461 | opp_overlap 400105 400104 GAAAGTCCCACCAAA GCAAAAACTAT AAG AAAGTTTTTGC CTTCTAACTATGAAG topA 400066 - 402672 + | DNA topoisomerase I TERM 286 402686 - 402713 + G 87 -4.4 -5.81622 | opp_overlap 402684, overlap 402687 AGAAAAAATATGATT TTAAAAAAAAAA GAAT TTTTTTTATTAA TTTTTTTAATTTTCT TERM 287 402872 - 402862 - g 77 -4 -5.35224 | TTTAGAAAAAGAAAA CAAA AAA TTTG ATGATAAAAAAGATA TERM 288 402971 - 402961 - g 77 -4 -5.35224 | TTTAGAAAAAGAAAA CAAA AAA TTTG ATGATAAAAAAGATA TERM 289 403070 - 403060 - g 77 -4 -5.35224 | TTTAGAAAAAGAAAA CAAA AAA TTTG ATGATAAAAAAGATA TERM 290 403135 - 403113 - g 86 -4.2 -5.75945 | opp_overlap 403119 403126, overlap 403099 403119 ATCTTTCAAAAAAAA GAAAAATTGA GCT TCAATCTTAC AAAATAATATTGATT TERM 291 403129 - 403119 - g 90 -4 -5.94743 | opp_overlap 403119 403126, overlap 403113 CAAAAAAAAGAAAAA TTGA GCT TCAA TCTTACAAAATAATA P9301_04611 402680 - 403282 + | hypothetical protein TERM 292 403533 - 403545 + G 72 -2.7 -5.39681 | overlap 403527 403525 AATTATGGGTCCTGT TAGAG GAA CTTTA TTTTTATTTCCTTAT P9301_04621 403303 - 403941 + | hypothetical protein cobT 403953 - 405110 + | hypothetical protein TERM 293 406005 - 405985 - g 80 -6.2 -4.85894 | AAAGTAAATATAAAA CTGAAATG CTCCC CATCTCAG GACCTTCTGAGAAAT P9301_04641 405111 - 406109 + | hypothetical protein P9301_04651 407240 - 406098 - | aldo/keto reductase TERM 294 406967 - 406939 - G 83 -10.6 -3.0806 | opp_overlap 406931, overlap 406941 TTTAAATTTTTAAGA GACTTTTTAAAA TTATT TTTTAAAAAGTC AAAATCACCCTTTGG TERM 295 407560 - 407547 - g 70 -3.9 -4.99643 | CATTAAAAAAAACAA CTTTA GGAG TAAAG TCTAACCTAAATCAG ribE 407351 - 408004 + | riboflavin synthase subunit alpha P9301_04671 408368 - 408015 - | hypothetical protein ctaE 409068 - 408466 - | cytochrome c oxidase, subunit III cyoB 410700 - 409075 - | cytochrome c oxidase, subunit I TERM 296 410644 - 410660 + g 74 -7.3 -4.12315 | opp_overlap 410644, overlap 410654 AAAGTATCTAAGCCA GCCTTTA GGT TGAAGGC TTTCATTATTAGTTT cyoA 411500 - 410697 - | putative cytochrome c oxidase, subunit 2 TERM 297 411223 - 411203 - G 71 -5.6 -4.731 | opp_overlap 411221, overlap 411221 AACCTATTAACAAAA CAATTATT GAAGG AATAATTG TCCATACAATTTCTA TERM 298 411401 - 411419 + g 75 -9.6 -2.84878 | opp_overlap 411400 411398, overlap 411400 TTGGTGCATTAATAC TTGCTTCC GTT GGGAGCAA ATTTACATTAAAACC TERM 299 412506 - 412521 + G 73 -7.6 -3.741 | overlap 412504 TTTTTCTCTTGTTTT CCCAAA TTAC TTTGGG TGTTTTAAGTCTTAA ctaA 411764 - 412690 + | hypothetical protein cyoE 412687 - 413688 + | putative protoheme IX farnesyltransferase ccmA 413728 - 414744 + | putative multidrug efflux ABC transporter P9301_04741 414794 - 415618 + | putative multidrug efflux ABC transporter P9301_04751 415626 - 416183 + | hypothetical protein groEL 417932 - 416187 - | chaperonin GroEL TERM 300 416342 - 416371 + g 79 -10 -2.89564 | GATCTGCACCTGGTC CTCCAGGGCCTG CGGCTT CAGGCTCTGGAA TGTCTGCCATCGCAA P9301_04771 418065 - 418244 + | hypothetical protein P9301_04781 418994 - 418245 - | 3-oxoacyl-[acyl-carrier protein] reductase ispD 419087 - 419758 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase P9301_04801 420628 - 419759 - | putative carboxypeptidase ubiA 421546 - 420638 - | prenyltransferase ppx 421651 - 423246 + | putative exopolyphosphatase P9301_04831 423733 - 423239 - | hypothetical protein TERM 301 423667 - 423688 + g 93 -8.1 -5.17488 | CTTTAATAAAATTTC CAATTCTCT TTAA AGAGGATTG TTTTCTTTTGGTATT cobM 424544 - 423789 - | putative precorrin-4 C11-methyltransferase TERM 302 423896 - 423911 + g 72 -4.8 -4.75356 | opp_overlap 423907 TTGTTCTAATTAGTT TTTTCT CAAT AGAAAA TTTTTCCATATCTTT TERM 303 424367 - 424378 + g 78 -2.2 -5.75538 | TGATCTGCTCTAAGT TGAG CGAA CTCG TTTTTATTTTTTCAG lgt 425430 - 424537 - | prolipoprotein diacylglyceryl transferase TERM 304 425288 - 425301 + g 85 -6.7 -5.03314 | TCTGGGTTAATATTC CTTGC CTTT GCAAG TTTTTTAGAAATAAA petA 426394 - 425441 - | apocytochrome f petC 426935 - 426399 - | cytochrome b6-f complex iron-sulfur subunit TERM 305 426444 - 426432 - G 73 -7.7 -3.58343 | opp_overlap 426431 TTCATTAGTTCTAAA GTCAG TTT CTGAC CATTGTTTGACGAGT P9301_04881 427059 - 427376 + | hypothetical protein tatC 428103 - 427345 - | Tat family protein secretion protein P9301_04901 428441 - 428181 - | hypothetical protein P9301_04911 430171 - 428471 - | secreted protein MPB70 precursor TERM 306 429663 - 429634 - G 77 -8.7 -3.68827 | opp_overlap 429615 429633 429625 429635, overlap 429635 CAGGTACTATTGAAA TTGAGTCTTTCCA TGAT TGAAAAGACTCAT CTTCTCTAGGTTGTT TERM 307 429635 - 429662 + g 82 -10 -3.35384 | opp_overlap 429634 429635, overlap 429615 429633 429625 AGGTACTATTGAAAT TGAGTCTTTCCA TGAT TGAAAAGACTCA TCTTCTCTAGGTTGT TERM 308 429662 - 429635 - G 90 -12.2 -2.80975 | opp_overlap 429615 429635 429633 429625, overlap 429634 AGGTACTATTGAAAT TGAGTCTTTCCA TGAT TGAAAAGACTCA TCTTCTCTAGGTTGT TERM 309 430772 - 430807 + G 71 -7.9 -3.54 | opp_overlap 430777, overlap 430777 TGATGAAACAGCAAA AAAAATAATCAAGTT AATAAA AACTTGATTATTTTC TATTTATCAACTCAT gmk 430245 - 430799 + | guanylate kinase TERM 310 430777 - 430802 + T 86 -7.8 -4.84918 | opp_overlap 430777, overlap 430772 AAACAGCAAAAAAAA TAATCAAGTT AATAAA AACTTGATTA TTTTCTATTTATCAA TERM 311 430802 - 430777 - T 100 -7.8 -5.9663 | opp_overlap 430772 430777 AAACAGCAAAAAAAA TAATCAAGTT AATAAA AACTTGATTA TTTTCTATTTATCAA psaJ 430948 - 430814 - | photosystem I reaction center subunit IX psaF 431531 - 430977 - | photosystem I PsaF protein (subunit III) qri7 431606 - 432676 + | o-sialoglycoprotein endopeptidase P9301_04961 432682 - 432861 + | high light inducible protein TERM 312 433691 - 433665 - g 84 -2.3 -6.17033 | opp_overlap 433688 433690 AAAAAAAATAAAAAA TGAAGCCTCAT TTGGT ATAGAGCTTCA AGTTACCCTTGGATT nhaP 433024 - 434229 + | CPA1 family Na+/H+ antiporter gltX 435660 - 434230 - | glutamyl-tRNA synthetase TERM 313 435701 - 435678 - R 80 -5.9 -5.24129 | overlap 435650 TTCTTTTAGAAAAAA CGGGACCGA CGGGAT TCGAACCCG CAACTTCCGCCGTGA TERM 314 435760 - 435779 + r 72 -8 -3.5456 | CGGTCCCAGAGTTTT GTTCTAAA TTTA TTTAGAAC TTCATTCTTAAAATT P9301_04991 436095 - 435901 - | hypothetical protein rplS 436736 - 436257 - | 50S ribosomal protein L19 P9301_05011 437068 - 436760 - | hypothetical protein map 437164 - 438003 + | methionine aminopeptidase P9301_05031 438726 - 438007 - | short chain dehydrogenase TERM 315 438215 - 438225 + g 79 -2.6 -5.7827 | CCTAAGATAATTTTT TTAA TTA TTAA TTTTTTCTTTGTATT TERM 316 438901 - 438916 + G 81 -9 -3.80014 | opp_overlap 438900 438901 CGATATATTATTAAT TGGCTC ATGT GAGCCA TTTAGTGGTAAGTCT TERM 317 438916 - 438901 - g 71 -9 -2.55606 | opp_overlap 438901, overlap 438900 CGATATATTATTAAT TGGCTC ATGT GAGCCA TTTAGTGGTAAGTCT pta 438881 - 439990 + | phosphotransacetylase domain-containing protein P9301_05051 440016 - 440528 + | hypothetical protein TERM 318 440974 - 440959 - g 79 -2.6 -5.73563 | ATCAAATTAAAAAAA TTAATG TCAG CATCAA TGGAGAAACACTCAG P9301_05061 440595 - 441092 + | nucleotide-binding protein P9301_05071 441120 - 441329 + | hypothetical protein P9301_05081 441534 - 441358 - | hypothetical protein hflC 441440 - 442243 + | Band 7 protein hemL 443620 - 442319 - | glutamate-1-semialdehyde aminotransferase xthA 444695 - 443850 - | exodeoxyribonuclease III P9301_05121 444767 - 445051 + | hypothetical protein P9301_05131 445092 - 445691 + | hypothetical protein P9301_05141 445744 - 446976 + | hypothetical protein P9301_05151 446967 - 447929 + | hypothetical protein thiP 449311 - 447926 - | putative iron ABC transporter P9301_05171 450576 - 449488 - | G3E family GTPase phhB 450897 - 450607 - | pterin-4-alpha-carbinolamine dehydratase P9301_05191 451389 - 450934 - | hypothetical protein TERM 319 452440 - 452454 + G 80 -5.8 -5.03747 | opp_overlap 452440, overlap 452442 ATAGTTAAATCCAAA TCTTTT TCA AAAAGA TTTTTTAAAAAATTT P9301_05201 451498 - 453003 + | carboxypeptidase Taq (M32) metallopeptidase P9301_05211 453067 - 453654 + | putative inorganic pyrophosphatase hemC 454611 - 453661 - | porphobilinogen deaminase P9301_05231 455893 - 454709 - | RNA polymerase sigma factor RpoD TERM 320 456004 - 455990 - H 75 -5.8 -5.02074 | TTAGTTTTTAAAAAA CATTTT CAC AAAATG AGAATAAGAAAAGTT priA 456217 - 458493 + | primosomal protein N' (replication factor Y) P9301_05251 459603 - 458494 - | hypothetical protein TERM 321 459182 - 459170 - G 76 -6.3 -4.68994 | opp_overlap 459165 459170 459170 ATGATCAGTGAAAAA CCTTT TTG AAAGG GTTTTGTTTCACCAG argB 460458 - 459607 - | acetylglutamate kinase TERM 322 460176 - 460187 + g 71 -3 -5.1675 | TTAGAACCATCTCGA CAAT TTCC ATTG TTTTTTGATCAGTAA P9301_05271 461053 - 460523 - | hypothetical protein TERM 323 460553 - 460573 + g 76 -8.5 -3.50853 | overlap 460527 AAAATCAAATTCTTT TTTATTATC GTC GATAATAAA TTCTGATTCAAGACC P9301_05281 461067 - 461276 + | hypothetical protein P9301_05291 461703 - 461278 - | single-stranded DNA-binding protein TERM 324 462292 - 462271 - g 71 -3.1 -5.28778 | ATCATGTATAAAAAA TTCAAACAT AGCG ATACTTGAA CCGAGTAAAAATAAT cobK 461732 - 462523 + | precorrin-6X reductase cutA 462552 - 462842 + | CutA1 divalent ion tolerance protein P9301_05321 463850 - 462849 - | carbohydrate kinase TERM 325 463309 - 463322 + g 76 -5.3 -5.12617 | TTTGCAATTTGGGCG GCTTT AATA AAAGC TTTTTTAGCTAATTC purA 465176 - 463866 - | adenylosuccinate synthetase psb27 465695 - 465258 - | putative photosystem II reaction center Psb27 protein proS 467524 - 465722 - | prolyl-tRNA synthetase P9301_05361 467698 - 468048 + | resolvase P9301_05371 468145 - 468399 + | Reverse transcriptase (RNA-dependent) P9301_05381 468389 - 468943 + | inorganic pyrophosphatase arsC 468940 - 469293 + | putative arsenate reductase P9301_05401 469323 - 469982 + | Signal peptidase I gpmB 471364 - 470036 - | putative alpha-ribazole-5'-P phosphatase TERM 326 472297 - 472317 + G 70 -6.2 -4.32177 | GATATCTTTTCATGG CTATTCCT CCATT AGGGATAG TTTATTATCAAATAA P9301_05421 471480 - 472841 + | membrane-associated protease TERM 327 473309 - 473321 + G 80 -7.7 -4.30576 | opp_overlap 473307 473309 AGAAAAATTTAAATA CCTTC ATT GAAGG TTTTAGTGATAGCAA TERM 328 473321 - 473309 - g 73 -7.7 -3.59063 | opp_overlap 473309, overlap 473307 AGAAAAATTTAAATA CCTTC ATT GAAGG TTTTAGTGATAGCAA P9301_05431 472924 - 473355 + | hypothetical protein TERM 329 473997 - 473977 - g 74 -4 -5.13741 | overlap 473979 473980 GTAATTTAATAAAAA GAGGAG GAGATGGAA CTCCTC TACCGGATAATTCAG TERM 330 474259 - 474273 + G 72 -8.6 -3.08201 | overlap 474258 ATTCTCAAGATTTAT TTGAGC CAG GCTCAA CTTTTAAACCTATTA P9301_05441 473355 - 475106 + | peptidoglycan synthetase tal 475195 - 476196 + | transaldolase B fixC 477354 - 476221 - | NAD binding site TERM 331 476561 - 476547 - G 71 -8.6 -2.97386 | overlap 476549 AAAATGGATCACATA GAGATG CTG CATCTC CAACCGCTAGAACTT TERM 332 477161 - 477174 + g 71 -5.3 -4.60797 | ACATTCTTAATTTTT GATTC TATG GAATC TTTTATATCTAAAGG frr 477872 - 477351 - | ribosome recycling factor pyrH 478626 - 477922 - | uridylate kinase cobO 479447 - 478755 - | cob(I)alamin adenosyltransferase P9301_05501 480650 - 479481 - | phage integrase family protein TERM 333 479658 - 479672 + g 70 -4.3 -4.88918 | TACTGCCCAAGCATG CCTTA GATCA TAAGG TTTTATTTGCAATGA TERM 334 479902 - 479870 - G 87 -8.8 -4.18494 | gap 1, opp_overlap 479879 TAGTCGTAGGCAAAA CTCTTA-TAATTTTG TCCC CAAAATTAGTAAGAG AACTTAAATCACAAA hemH 480716 - 481891 + | ferrochelatase TERM 335 481996 - 482020 + F 75 -6.7 -4.49556 | opp_overlap 482003 AAGTATTTAATTGAG TTTAATATTTA TAT TAAATATTGAA TTTCTTTAGTGACCC TERM 336 482089 - 482079 - g 71 -5.4 -4.55826 | overlap 482080 TTCAAAACATGAAAA TCCA GTT TGGA TAACTGGTGCAGATG TERM 337 482781 - 482771 - g 77 -4 -5.34309 | ATGATGAAATAAAAA CTTT GGC AAAG AATTATCAAATACCA ilvB 482029 - 483792 + | acetolactate synthase 3 catalytic subunit P9301_05531 483860 - 484210 + | hypothetical protein P9301_05541 484786 - 484217 - | hypothetical protein TERM 338 484368 - 484388 + g 74 -6.3 -4.39166 | CTATAGGCAGTTCTT TTTAGATCA AGT TGATTTAAA TTTTGCTCTCTGAAG P9301_05551 485927 - 485022 - | hypothetical protein rps1b 487129 - 485924 - | 30S ribosomal protein S1-like protein B, putative Nbp1 P9301_05571 487196 - 487990 + | creatininase P9301_05581 488075 - 488830 + | hypothetical protein TERM 339 489377 - 489367 - g 74 -6.8 -4.17417 | GCAACTAGAGATAAA TGCG CCT CGCA TTGGGATTGACCTCA TERM 340 489408 - 489398 - g 76 -5.4 -5.05782 | opp_overlap 489398, overlap 489399 ATTGACCTCAAAAAA GCAA CTG TTGC TGTAATTGGTGCTAC P9301_05591 488939 - 489979 + | dehydrogenase accA 489984 - 490991 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha P9301_05611 490966 - 491700 + | short chain dehydrogenase TERM 341 491952 - 491936 - g 71 -8.1 -3.25207 | TGAAATTATAAGAGA CAGAATT AAG AATTCTG GGAAAAGATTCAGTG folE 491853 - 492593 + | putative GTP cyclohydrolase I trpF 493246 - 492590 - | phosphoribosylanthranilate isomerase TERM 342 492777 - 492789 + g 76 -3.5 -5.47218 | TGCAGATTCTTTAGA TAAAT AGA ATTTA TTTTTTTCCCTGAAC TERM 343 492850 - 492870 + g 76 -6.3 -4.65446 | GTAGTATCGCATCTA TAAAATCTT CAA AAGGTTTTA TTTTATCTATGTCCT P9301_05641 493302 - 494525 + | Zn-dependent protease lplA 495274 - 494522 - | protein ligase TERM 344 494615 - 494640 + g 73 -7.7 -3.73399 | opp_overlap 494619, overlap 494619 CAGGAATGAATTTCT CAAATGTTGAA CTAT TTCATCATTTG TTAGTTTTAGATTTA psaM 495346 - 495480 + | photosystem I reaction center subunit XII P9301_05671 495565 - 495912 + | hypothetical protein TERM 345 496293 - 496267 - g 76 -8.8 -3.37915 | opp_overlap 496286, overlap 496272 496276 496286 GTTTATAAACCAAGA CTAAAGAGACCT GAA AGATCTCCTCAG GGGTTTGAGAACTCT TERM 346 496288 - 496272 - g 74 -7.3 -3.98816 | opp_overlap 496286, overlap 496267 496276 496286 TAAACCAAGACTAAA GAGACCT GAA AGATCTC CTCAGGGGTTTGAGA P9301_05681 495967 - 496971 + | protochlorophyllide oxidoreductase chlL 497865 - 496978 - | protochlorophyllide reductase iron-sulfur ATP-binding protein chlB 499626 - 498055 - | light-independent protochlorophyllide reductase subunit B TERM 347 499466 - 499481 + g 79 -8.2 -3.98745 | GTCGTATATGTAACT GGGGGC CTTT GCCCTC TTCTTTCAATCATTG chlN 500889 - 499633 - | light-independent protochlorophyllide reductase subunit N TERM 348 500064 - 500078 + g 95 -8.6 -5.06414 | CTTTGTGAGATTCCA GAGCAA GTT TTGCTC TTTTTATTAAAGGCG P9301_05721 501415 - 501047 - | hypothetical protein TERM 349 501375 - 501394 + g 79 -2.8 -5.75945 | overlap 501378 GTTAATTCTTTTTCA GTACCAGA AACA TTTGGTTC TTTTTTTTGAGAAGT P9301_05731 501513 - 502283 + | hypothetical protein P9301_05741 502892 - 502308 - | HAM1 family protein ccmK 503223 - 503534 + | carboxysome shell protein CsoS1 TERM 350 503764 - 503733 - g 82 -9.4 -3.65812 | opp_overlap 503736 503738, overlap 503736 GGTGTCCCAAGAGAA GAAGTTGCAGCAGC TGTT GCCGCTGAATCTTC AACAGGTACTTGGTC rbcL 503604 - 505019 + | ribulose bisophosphate carboxylase TERM 351 505056 - 505034 - f 91 -10.7 -3.5774 | opp_overlap 505033 505032 ATTCAAGTTTCGAAA TTGAGGAGA TTAAT TCTCCTCAA AATTATTAAAATCTC rbcS 505109 - 505450 + | ribulose bisphosphate carboxylase, small chain TERM 352 505501 - 505472 - f 87 -10.9 -3.09327 | opp_overlap 505473 505488 505488 TTATCGTAGTTAATA TCTTTCTCCAAAA AAAT TTTTGGAGAAAGT TTTTCAAAAAAGTTT TERM 353 505473 - 505500 + F 100 -14.4 -4.57341 | opp_overlap 505472, overlap 505488 505488 TATCGTAGTTAATAT CTTTCTCCAAAA AAAT TTTTGGAGAAAG TTTTTCAAAAAAGTT csoS2 505542 - 507836 + | carboxysome shell protein CsoS2 csoS3 507844 - 509373 + | carboxysome shell protein CsoS3 P9301_05801 509376 - 509627 + | putative carboxysome peptide A TERM 354 509798 - 509818 + G 95 -11.9 -3.6608 | AACTGGGTTTTTACC TCTAGTGGC TCC GCCGCTAGA TTTGCATGCCCTAAT P9301_05811 509645 - 509893 + | putative carboxysome peptide B P9301_05821 509969 - 510208 + | hypothetical protein P9301_05831 510442 - 510215 - | hypothetical protein tdcF 510920 - 510528 - | YjgF family translation initiation inhibitor P9301_05851 511856 - 510945 - | putative hydroxyacylglutathione hydrolase TERM 355 511308 - 511289 - GH 84 -6.4 -5.1356 | overlap 511283 TGTCACCAATAAAAA GAACAGGG TTCT CCCCATTC AAAAAGAAGGCAATA hisG 511726 - 512364 + | ATP phosphoribosyltransferase catalytic subunit TERM 356 512461 - 512436 - g 79 -2.7 -5.88197 | gap 1, opp_overlap 512440, overlap 512440 CTAAAGATAAAAAAA CAAT-CTATCTA ATC TTGATAGTATTG TTACCTGTTTCTTTC P9301_05871 512375 - 514168 + | putative multidrug efflux ABC transporter P9301_05881 514168 - 514698 + | putative acetyltransferase P9301_05891 515381 - 514695 - | glycosyltransferase P9301_05901 515998 - 515387 - | hypothetical protein TERM 357 515703 - 515716 + g 86 -3.9 -5.73978 | overlap 515712 ATATTTTTGATCTTA TTTTG TGTA CAAAA TTTTTTGTTTATAAT dnaA 516187 - 517581 + | chromosomal replication initiation protein P9301_05921 518818 - 517589 - | glutathione S-transferase TERM 358 517863 - 517877 + g 80 -5.8 -5.06089 | TCTTTATTGTATGGA TTTACT TTT AGTAAA TTTTCTTTATGCTTT TERM 359 519718 - 519698 - g 76 -8.5 -3.53012 | TCTTTTGCCTTTAAA TTTAGATTT TTT AAATCTAAA GATGGATGGCCAATA gor 518871 - 520235 + | glutathione reductase (NADPH) ecm27 521317 - 520238 - | CaCA family sodium/calcium exchanger P9301_05951 521448 - 522497 + | dihydroorotase TERM 360 522516 - 522502 - f 78 -5.8 -5.1848 | opp_overlap 522489, overlap 522490 AATTAATTTAAAAAA TTAGAT TTA ATCTAA GAATCAAAAGTGTAA P9301_05961 522761 - 522994 + | NADH dehydrogenase subunit NdhL (ndhL) P9301_05971 522999 - 523319 + | hypothetical protein TERM 361 523331 - 523313 - f 75 -5.4 -4.99638 | opp_overlap 523322, overlap 523322 AGATCTAGAGAAAAA TCCATAAA TTT TTTATAGA AAAATATCTAAAAAT trpA 523348 - 524190 + | tryptophan synthase subunit alpha P9301_05991 524629 - 524273 - | transcriptional regulator AbrB P9301_06001 524727 - 524996 + | YciI-like protein P9301_06011 525513 - 525193 - | hypothetical protein P9301_06021 525882 - 525514 - | hypothetical protein P9301_06031 526841 - 525918 - | type II alternative sigma-70 family RNA polymerase sigma factor TERM 362 526942 - 526904 - R 93 -12.3 -3.16743 | opp_overlap 526904, overlap 526907 526915 526918 AAGCCATACATGTAA TAATTAATTAATAATTA ATTAA TAATTATTAATTAATTA TTTTATATTTTTCCC TERM 363 526904 - 526942 + r 100 -12.3 -4.98672 | opp_overlap 526904 526907 526915 526918 AAGCCATACATGTAA TAATTAATTAATAATTA ATTAA TAATTATTAATTAATTA TTTTATATTTTTCCC TERM 364 526939 - 526907 - R 84 -9.6 -3.72231 | opp_overlap 526904, overlap 526904 526915 526918 CCATACATGTAATAA TTAATTAATAATTA ATTAA TAATTATTAATTAA TTATTTTATATTTTT TERM 365 526942 - 526915 - R 79 -8.8 -3.50251 | opp_overlap 526904, overlap 526907 526904 526918 GTAATAATTAATTAA TAATTAATTAAT AATT ATTAATTAATTA TTTTATATTTTTCCC hisI 527658 - 526996 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein P9301_06051 527722 - 528192 + | 6-pyruvoyl-tetrahydropterin synthase clpB 530823 - 528241 - | ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB TERM 366 529803 - 529817 + g 75 -2.8 -5.54907 | ATACGGTATCTTCTA TTGAAG GAG CATCAA TTTTTATTTTCTGAA TERM 367 530661 - 530677 + g 72 -2.4 -5.36965 | overlap 530665 TCTTTAGATTTATAT TATTTT TTATT AAAATA TTTTTTGTAATATTG TERM 368 530821 - 530775 - G 100 -14.9 -4.56597 | gap 1, opp_overlap 530780, overlap 530780 TTTCTTTGGCAAAAA TAAAATAGTTCCAAGCAGAATT TGAG AATTC-GCTTGGAACTATTTTC ATCAATCAAAATTTG TERM 369 530780 - 530816 + g 100 -14.8 -4.2828 | gap 1, opp_overlap 530775 530780 TTGGCAAAAATAAAA TAGTTCCAAGCAGAATT TGAG AATTC-GCTTGGAACTA TTTTCATCAATCAAA TERM 370 530816 - 530780 - G 100 -14.8 -5.26119 | gap 1, opp_overlap 530780, overlap 530775 TTGGCAAAAATAAAA TAGTTCCAAGCAGAATT TGAG AATTC-GCTTGGAACTA TTTTCATCAATCAAA petE 531248 - 530898 - | plastocyanin P9301_06081 532292 - 531309 - | nucleoside-diphosphate-sugar epimerase TERM 371 532323 - 532343 + r 70 -4.8 -4.78237 | GTGAGTTTTTTCCCA TGTTCAAA AAATG TTTGAGCA TTTTCTTCTGGAGTC hemE 533341 - 532301 - | uroporphyrinogen decarboxylase TERM 372 533381 - 533371 - R 80 -2.6 -6.06723 | TGCTGTAAAAAAAAA TTTT TTA AAAA TTCCAACTTAGAAAT glgB 535731 - 533467 - | glycogen branching enzyme P9301_06111 537365 - 535791 - | acyl esterase P9301_06121 537639 - 537373 - | hypothetical protein TERM 373 537427 - 537442 + g 100 -6.2 -6.25578 | opp_overlap 537421, overlap 537421 AGAAAAGATCTCCGC GTTAAC GGGA GTTAAC TTTTTTTTATTTGAT P9301_06131 538099 - 537680 - | hypothetical protein TERM 374 537888 - 537901 + g 70 -3.9 -5.03314 | overlap 537884 TATGCTTGCGGTGGA GAAAT TCCA ATTTC TTTTTTAAAAATGGC P9301_06141 538554 - 538111 - | hypothetical protein TERM 375 538646 - 538629 - H 73 -3.5 -5.47399 | CTAACTTGAAAAAAA TTAGATC TTTA AATCTAA ATACTAAGATACTTT TERM 376 538757 - 538728 - g 74 -5.9 -4.65263 | overlap 538729 538732 ATTTTTTAAAAGAAA CTTATAGTTCTAA GAAA TTAGAACTAGAAA AAAGTATTGAGAATC TERM 377 538753 - 538732 - g 73 -8.9 -2.84636 | overlap 538729 538728 TTTAAAAGAAACTTA TAGTTCTAA GAAA TTAGAACTA GAAAAAAGTATTGAG TERM 378 539052 - 539036 - g 87 -4.5 -5.71983 | CGAATTACAAAAAAA TCACAAT CAA ATTATGA ATTGAATTTTAACTT P9301_06151 538670 - 542560 + | hypothetical protein proA 542625 - 543935 + | gamma-glutamyl phosphate reductase TERM 379 543947 - 543929 - f 73 -7.6 -3.68183 | overlap 543927 CTATACACATAAAGA TCTTTAAA ACT TTTAAAGA TGGAAACTTTTTTAA folB 543947 - 544309 + | dihydroneopterin aldolase TERM 380 544358 - 544368 + G 81 -4 -5.64304 | TCATGGTCTTTGGAA TACT TCA AGTA TTTTTTCTTCTATTA P9301_06181 544296 - 544907 + | lipase family protein prlC 546987 - 544900 - | M3 family peptidase P9301_06201 548542 - 547001 - | NAD(P)H-quinone oxidoreductase subunit 4 TERM 381 547429 - 547404 - G 76 -3.3 -5.4505 | overlap 547410 CTTGCCAAGAAAAAA GCAAATGTTAT TGGC AAAACCTTTGC CAAACCGCCCATATT TERM 382 547511 - 547496 - G 77 -4 -5.4505 | opp_overlap 547510, overlap 547498 GCCCGTAACAAAAAA CATAGC TGCA GCTATA AGTCCGTGACTAATC thrB 549569 - 548622 - | homoserine kinase TERM 383 549574 - 549595 + r 73 -5.3 -4.8048 | GGAATAGACATTTTT TGTTTTTAA GTTT TTAAAAGCA TTTTTGCTCTGCAGG glk 550613 - 549579 - | putative glucokinase thrS 552540 - 550624 - | threonyl-tRNA synthetase trpS 553560 - 552544 - | tryptophanyl-tRNA synthetase P9301_06251 553972 - 553550 - | hypothetical protein TERM 384 553710 - 553726 + g 91 -8.1 -4.946 | TTTTTTGCATATTCT TTGATTG ATT CAATCAA TTTTTCGTCTTTGAT TERM 385 554529 - 554557 + G 74 -9.8 -2.6993 | opp_overlap 554522, overlap 554526 554526 554549 TATCAAAGTTTTCAA TCTGTTTTGAAA AGTAA TTTCAAAGCAGA TAAGTTTGACTTTGT TERM 386 555092 - 555074 - g 74 -7.6 -3.83066 | opp_overlap 555073 555068, overlap 555069 AATGACAGTATTAAA TTCTTTAA TGA TTAAAGAA ATTAAGTCTATATGG P9301_06261 554139 - 555473 + | hypothetical protein P9301_06271 555485 - 556393 + | ABC transporter substrate-binding protein P9301_06281 556397 - 557161 + | ABC transporter ATP-binding protein TERM 387 557177 - 557187 + G 71 -3.2 -5.22039 | ATTTTAAATTATATG GAGC TCT GTTC TTTTTTAACTTTAGA P9301_06291 557174 - 558046 + | ABC transporter P9301_06301 558043 - 559215 + | hypothetical protein P9301_06311 559557 - 559222 - | hypothetical protein P9301_06321 560187 - 559603 - | leader peptidase I TERM 388 561014 - 561029 + G 74 -7.6 -3.81689 | opp_overlap 561013 561009 561014 ACAATTACAAGAAAT TACTGG TTGG CCAGTA TTTGCTGATCCTGTT menD 560238 - 562001 + | menaquinone biosynthesis protein menB 562037 - 562894 + | naphthoate synthase glgA 562930 - 564381 + | glycogen synthase murF 564394 - 565767 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase glmU 567118 - 565769 - | UDP-N-acetylglucosamine pyrophosphorylase P9301_06381 568049 - 567138 - | hypothetical protein TERM 389 567685 - 567675 - G 70 -4 -5.09225 | ACTGCATTTAAAAAA TTGA TCC TCAA AGTAATCTTGTCGAT aroA 569372 - 568062 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 390 569463 - 569453 - H 80 -2.6 -6.06723 | GTTTTTAAAAAAAAA TAAT CAA ATTA AGTAACTGTTTTCTA P9301_06401 569658 - 570233 + | 2-phosphosulfolactate phosphatase P9301_06411 570264 - 571091 + | putative nitrilase amiC 571091 - 572176 + | cell wall hydrolase/autolysin murI 572173 - 572967 + | putative aspartate and glutamate racemases:glutamate racemase sds 572995 - 573966 + | polyprenyl synthetase; solanesyl diphosphate synthase (sds) acs 574061 - 576043 + | acetyl-coenzyme A synthetase P9301_06461 576762 - 576040 - | hypothetical protein dnaQ 576880 - 577659 + | putative DNA polymerase III, epsilon subunit P9301_06481 578100 - 577690 - | hypothetical protein hisS 578199 - 579479 + | histidyl-tRNA synthetase P9301_06501 579476 - 579769 + | hypothetical protein P9301_06511 579772 - 580071 + | hypothetical protein P9301_06521 580208 - 580441 + | hypothetical protein P9301_06531 580665 - 580489 - | hypothetical protein TERM 391 581122 - 581135 + G 85 -8.1 -4.70879 | AATTGTTTTCTGGGC GGGTG CATT CACCC TTTTTGAACTTTCAC P9301_06541 580997 - 582055 + | light-harvesting complex protein TERM 392 582102 - 582084 - f 77 -7.4 -4.44797 | opp_overlap 582084 TTACCAATATCAAAA GGCTCC TCTTACC GGAGCC TTTTTTATTTGAAAA TERM 393 582084 - 582102 + F 93 -7.4 -5.63517 | opp_overlap 582084 TTACCAATATCAAAA GGCTCC TCTTACC GGAGCC TTTTTTATTTGAAAA P9301_06551 582149 - 583537 + | sodium/solute symporter family protein P9301_06561 583574 - 583831 + | hypothetical protein P9301_06571 584487 - 583828 - | glutathione S-transferase N terminus P9301_06581 584562 - 585104 + | NADH-ubiquinone/plastoquinone complex I protein P9301_06591 585808 - 585101 - | short-chain dehydrogenase/reductase P9301_06601 587097 - 585814 - | putative lycopene epsilon cyclase TERM 394 586640 - 586626 - G 80 -6.4 -4.87786 | opp_overlap 586626 TTAATTTTAGAAAAA CAGGAT CAT ACCCTG TTGCATCTACTACTA P9301_06611 587323 - 588324 + | putative light-dependent protochlorophyllide oxido-reductase mscS 589326 - 588295 - | small mechanosensitive ion channel pncA 589974 - 589405 - | isochorismatase hydrolase family protein TERM 395 589775 - 589789 + g 77 -8.6 -3.68325 | TCAGGTATCGTTACT CCCAAT TTG ATTGGG TTCTGTTCAGATATA P9301_06641 590091 - 590543 + | ferric uptake regulator family protein P9301_06651 591482 - 590550 - | Fe-S oxidoreductase stpA 592743 - 591523 - | putative glucosylglycerolphosphate phosphatase P9301_06671 592859 - 594406 + | hypothetical protein P9301_06681 594500 - 595159 + | hypothetical protein met17 595232 - 596560 + | putative O-Acetyl homoserine sulfhydrylase metA 596514 - 597464 + | putative homoserine O-succinyltransferase P9301_06711 599035 - 597470 - | putative sulfate transporter P9301_06721 600346 - 599066 - | FAD linked oxidase, N-terminal P9301_06731 600313 - 601518 + | hypothetical protein TERM 396 601719 - 601736 + FH 73 -2.7 -5.75945 | overlap 601720 CAAAAAAAACAGGAC TTCAACA TTAT TGTTGAC TTTTTTTTAAGAACT TERM 397 601791 - 601777 - fH 71 -7.2 -3.92746 | opp_overlap 601777 601775, overlap 601775 CTTATTTGAAAAAGA GGTTTT TTA AAAACC TACTTATAACATGAG TERM 398 601848 - 601871 + FH 78 -8.4 -4.0156 | CCTGAAGATTATTGT TGATATTTTT AGAG AAAAATATCA TTATTGTTGATGTAG P9301_06741 601898 - 602155 + | hypothetical protein P9301_06751 603782 - 602142 - | glucose-methanol-choline (GMC) oxidoreductase:NAD binding site TERM 399 602565 - 602585 + g 74 -9.1 -3.02461 | overlap 602554 602551 602550 602567 ATCTGTTTTTCTTGA GAGAGAAAC TGA GTTTTTCTC TCTTGGAAGGACTTC TERM 400 602840 - 602829 - G 74 -3 -5.47218 | opp_overlap 602829, overlap 602833 TGGGACTGAAAAAAA TCTA CATA TAGA TATGTGATCCATTAG TERM 401 603382 - 603370 - G 73 -9.1 -2.94099 | TCTTCGTACGAGATA GGCCA GTT TGGCC CGAATCCGTCTTTTT P9301_06761 603890 - 604363 + | pentapeptide repeat-containing protein P9301_06771 604758 - 604366 - | LEM domain-containing protein TERM 402 604671 - 604694 + g 83 -11.2 -2.95388 | opp_overlap 604668, overlap 604673 GAGTATAAATTATTC CATCTTTAGA TTTA TCTAAAGATG TATCTACATTAAATC TERM 403 604673 - 604692 + g 70 -8 -3.02739 | opp_overlap 604668, overlap 604671 GTATAAATTATTCCA TCTTTAGA TTTA TCTAAAGA TGTATCTACATTAAA P9301_06781 605258 - 604761 - | VHS domain-containing protein TERM 404 605293 - 605311 + r 70 -7.6 -3.36327 | opp_overlap 605292 605295 TATGATATATAAATC TATATAGA TTG TCTATATA TTCTAAATAGAATAA gloA 605914 - 605525 - | glyoxalase I TERM 405 606386 - 606396 + G 77 -4 -5.50774 | AATAATTTTTATATT TACA CTA TGTA TTTTTATTTATTCTA P9301_06801 606048 - 606482 + | hypothetical protein P9301_06811 606839 - 606510 - | hypothetical protein P9301_06821 607431 - 606847 - | hypothetical protein TERM 406 607325 - 607308 - G 72 -2.7 -5.47399 | opp_overlap 607308 CCAATCCTAAAAAAA TAAAACC GAAA GGTATTA ATTCGTTCTTGTGAA P9301_06831 607688 - 607488 - | hypothetical protein P9301_06841 608430 - 607915 - | hypothetical protein P9301_06851 608804 - 608421 - | hypothetical protein P9301_06861 609400 - 608804 - | hypothetical protein P9301_06871 609927 - 609397 - | hypothetical protein TERM 407 610434 - 610452 + H 73 -2.4 -5.7946 | opp_overlap 610429 610434 AAGTAAAAACCAAAA TGATCGTG TCA CATAATCA TTTTTTTATTGGCAA TERM 408 611156 - 611146 - g 72 -2.6 -5.50499 | GTATAGGTAAAAAAA TTTA TAA TAAA CCCGTAATTGGAGGA P9301_06881 610596 - 611399 + | leader peptidase (prepilin peptidase) / N-methyltransferase P9301_06891 612774 - 611413 - | Type II secretory pathway component PulF-like protein TERM 409 612566 - 612589 + g 95 -4 -6.32976 | ATTTTCAATTCGACG TAAGTTTTCA AAAT TGAAAGTTTA TTTTTTTCTTTTTTT pilT 613880 - 612807 - | twitching motility protein P9301_06911 615583 - 613877 - | Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB-like protein TERM 410 614368 - 614400 + g 71 -5.5 -4.65722 | opp_overlap 614375 TGAAAACCATGTGAC CAGTTAATGCCGC TTCCATT GCGGCTTGAGCTG TTTCTTTATCTCTAG P9301_06921 615754 - 616239 + | hypothetical protein TERM 411 616721 - 616735 + G 74 -7.2 -4.14945 | overlap 616733 AATTGGTGTTGCATT TTATGG GGA CCATAA TTTAATTATTGTTAG TERM 412 616986 - 616971 - g 70 -6.2 -4.18197 | ACCTCTGATTTAAAA CAGATT TCAC AATCTG ACAAAAAGGTTGAAT TERM 413 617576 - 617590 + G 74 -7.2 -4.10159 | opp_overlap 617569 617572, overlap 617569 617574 TTCTAAATCTATTGA GAATAG TCT CTATTC TTTAATTTCAATATT P9301_06931 616236 - 617621 + | hypothetical protein P9301_06941 617612 - 618337 + | hypothetical protein TERM 414 619080 - 619062 - g 100 -7.6 -5.41143 | opp_overlap 619062 619065 CATTTCTGAAAAAAA TAATGAAT ATG ATTCATTA ATTATCCCATTAAGT P9301_06951 618343 - 619209 + | hypothetical protein P9301_06961 619318 - 621036 + | Type II secretory pathway component PulD-like protein P9301_06971 622545 - 621052 - | hypothetical protein P9301_06981 623151 - 622546 - | hypothetical protein P9301_06991 623729 - 623154 - | hypothetical protein P9301_07001 625847 - 623730 - | hypothetical protein P9301_07011 626542 - 625916 - | hypothetical protein TERM 415 625960 - 625971 + g 83 -5.8 -5.16237 | ATCTTCCTCTATCTG CTGC TTTT GCAG TTTTTTCGTACACTT TERM 416 626167 - 626145 - G 75 -4.8 -5.07486 | opp_overlap 626152 626154 GATGTTGAATAAAAA GAAGTTGCTG TTC CTGGAACTTC TACAGGGTCAGTTCC P9301_07021 626844 - 627281 + | hypothetical protein P9301_07031 627567 - 628247 + | hypothetical protein P9301_07041 628832 - 628263 - | hypothetical protein P9301_07051 629640 - 628819 - | hypothetical protein P9301_07061 630178 - 629693 - | hypothetical protein TERM 417 630150 - 630119 - G 76 -3.4 -5.37345 | gap 1, opp_overlap 630119 TCCAATTATAAAAAA TAAA-AAAAATAAAC ATA ATTTATTTTTATTTA TTAGTTTCGAAGAAT P9301_07071 630435 - 630199 - | hypothetical protein TERM 418 630817 - 630803 - g 74 -7.2 -4.12315 | opp_overlap 630803, overlap 630791 AAAGGAAGAATTAAA TTTTCC TGA GGAAAA TATTAAAGAAGTTAA P9301_07081 630624 - 631475 + | hypothetical protein P9301_07091 632295 - 631504 - | hypothetical protein TERM 419 632264 - 632282 + g 77 -4 -5.42259 | opp_overlap 632264, overlap 632266 TCTCCGCATAAAGTA TTTTTTTT AGG AAAAAAGA TTTTTTTAACCATAA P9301_07101 632603 - 632454 - | hypothetical protein TERM 420 632694 - 632720 + r 100 -11 -4.3534 | opp_overlap 632700, overlap 632700 TTAAGGTTGGACAAA AAAAAAGCCACT AAA AGTGGCTTTTTC TTTTAATGGTTAAAA TERM 421 632714 - 632700 - R 100 -10 -6.22802 | opp_overlap 632694 632700 TTGGACAAAAAAAAA GCCACT AAA AGTGGC TTTTTCTTTTAATGG TERM 422 632700 - 632714 + r 100 -10 -5.50723 | opp_overlap 632700, overlap 632694 TTGGACAAAAAAAAA GCCACT AAA AGTGGC TTTTTCTTTTAATGG P9301_07111 632839 - 632738 - | hypothetical protein TERM 423 633198 - 633182 - g 79 -3.7 -5.58454 | CCTACAGTAAAAAAA TCTGCAA TAG TTGAAGA GACTCCATTATTTGC TERM 424 633260 - 633279 + G 72 -5 -4.78839 | GATAAGGTCCAATTG GTAAATGC TTTG GCTTTTAC TTTTATTATGGGATT P9301_07121 633146 - 633340 + | hypothetical protein TERM 425 633355 - 633379 + T 84 -8.7 -4.33754 | opp_overlap 633359 633362, overlap 633359 633362 AATATTTTATTTTTG CAAAGCATCAA TTT TTGATTCTTTG TTTTCAATTATGGTT P9301_07131 633603 - 633346 - | RNA recognition motif-containing protein TERM 426 633445 - 633466 + g 78 -2.3 -5.85011 | opp_overlap 633445 TCTATTTTTTAGAAA TCTACATAT ATAT ACGTGTAGA TTTTTTTCGTTTTTG nrdJ 636025 - 633692 - | ribonucleotide reductase (class II) TERM 427 634446 - 634465 + g 72 -3.6 -5.30616 | opp_overlap 634450 ACTATTTTTCTCCAA GAATCTAA GAAT TTAGCTTC TTTTTCTTTGAATGC TERM 428 634668 - 634678 + g 95 -5.4 -5.94597 | ACGGAAAGAGCTGCG GCTT TAA AAGC TTTTTTTTGCTCTTC TERM 429 636475 - 636511 + G 80 -5.3 -5.26875 | opp_overlap 636476 636478, overlap 636476 TAAAAAATTTACGAT ACATTTGTTCTGATATT AAA GATATTAGATCAAATGA TTTTTTACTTAAAAA TERM 430 636476 - 636510 + G 77 -8.8 -3.75402 | opp_overlap 636476 636478, overlap 636475 AAAAAATTTACGATA CATTTGTTCTGATATT AAA GATATTAGATCAAATG ATTTTTTACTTAAAA P9301_07151 636159 - 636866 + | methylase prfC 636887 - 638524 + | peptide chain release factor 3 P9301_07171 638576 - 639250 + | hypothetical protein P9301_07181 640153 - 639245 - | Hsp33 protein P9301_07191 640790 - 640143 - | ABC transporter ATP-binding protein P9301_07201 640874 - 641317 + | hypothetical protein P9301_07211 641327 - 642100 + | hypothetical protein P9301_07221 642107 - 642850 + | hypothetical protein tesA 643511 - 642867 - | lysophospholipase L1 and related esterase P9301_07241 644691 - 643561 - | putative phosphonate ABC transporter P9301_07251 645808 - 645068 - | putative phosphonate ABC transporter phnD 646698 - 645805 - | phosphonate ABC transporter phosphonate-binding protein aspC 647889 - 646711 - | aminotransferases class-I TERM 431 648420 - 648460 + G 87 -8.5 -4.23104 | opp_overlap 648420 648423, overlap 648423 GGTCAATGGATTAAA CAAGATGGGAGAGAAATTA TGA TAATTTTTCATCCATCTTA TTTGTTGAGATTTCC TERM 432 648423 - 648457 + G 93 -10.2 -4.2204 | opp_overlap 648423 648420, overlap 648420 CAATGGATTAAACAA GATGGGAGAGAAATTA TGA TAATTTTTCATCCATC TTATTTGTTGAGATT P9301_07281 648051 - 648554 + | Uracil-DNA glycosylase ispG 648590 - 649807 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 433 651001 - 650985 - g 93 -9.5 -4.63044 | ACTGATATAAACAAA TCTGGAA TTA TTCCAGA TATAGATGTAAAAAT P9301_07301 649869 - 651203 + | carboxyl-terminal processing protease nadA 652114 - 651200 - | quinolinate synthetase TERM 434 651367 - 651394 + g 73 -4.4 -5.00388 | gap 1 AACCTTCTACATCAG GAACTTCAATAAA AAT TTTATT-AGGTTC TTTCTTTTTCATTTG TERM 435 651472 - 651486 + g 72 -8.6 -3.16683 | opp_overlap 651471 651472 CTTTACTTACGAAAT CAAGCA GCT TGCTTG TTGATCCAATAAAGT TERM 436 651486 - 651472 - G 71 -8.6 -2.8552 | opp_overlap 651472, overlap 651471 CTTTACTTACGAAAT CAAGCA GCT TGCTTG TTGATCCAATAAAGT P9301_07321 652278 - 653051 + | putative transcripton factor P9301_07331 653872 - 653075 - | hypothetical protein P9301_07341 653904 - 655094 + | hypothetical protein aroB 656182 - 655091 - | 3-dehydroquinate synthase TERM 437 656362 - 656346 - g 91 -8.1 -5.08601 | opp_overlap 656349 CGATTTTAAGAAAAA TTATTCC CTG GGAATAA TTGGAGGTGGTCAAT purK 656308 - 657498 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 438 657697 - 657737 + F 100 -10 -5.55855 | gap 1, opp_overlap 657710 ACGGGGATCCGGTAT TACCTATCAAAATGCCTGT TATA ACAGGT-TTTTGGTGGGTA TTTTATTTTTTTGGA P9301_07371 657863 - 658162 + | hypothetical protein P9301_07381 658159 - 658299 + | hypothetical protein P9301_07391 658289 - 658441 + | hypothetical protein TERM 439 658443 - 658464 + T 86 -4.6 -5.87996 | opp_overlap 658443 AGGACCATGGATAAT TAAAAACT TTATTT AGTTTTTA TTTTTTTCTTAATTC P9301_07401 658588 - 658451 - | hypothetical protein P9301_07411 659313 - 658564 - | NAD-dependent DNA ligase TERM 440 659198 - 659212 + g 71 -2.2 -5.47399 | TAATCACAATTAGGG TTTGTT CTC AATAAA TTTTTTTCAAGTTGG P9301_07421 659520 - 659314 - | hypothetical protein P9301_07431 659739 - 659551 - | hypothetical protein P9301_07441 660114 - 659878 - | hypothetical protein P9301_07451 660308 - 660598 + | zinc finger, C2H2 type-like protein TERM 441 661067 - 661044 - T 75 -7.6 -4.00756 | overlap 661048 CATTTTAGTAAATAA TAAATCAGCA TTTT TACTGATTTA CCTTCTTCACAGGTA TERM 442 661187 - 661216 + T 100 -10.2 -4.95957 | opp_overlap 661185 ACTAATGCTAAATCT GGAATGAATCTT CTATTT GAGATTCATTCC TTTTTAATTACTTTC P9301_07461 661512 - 661330 - | hypothetical protein TERM 443 661479 - 661490 + g 71 -3 -5.22312 | CCTCAAAAGCATTAT CAAT TAAT ATTG TTTTTTGATCTGGAT P9301_07471 661716 - 661519 - | hypothetical protein P9301_07481 662070 - 661816 - | high light inducible protein TERM 444 662395 - 662417 + r 81 -7.2 -4.74052 | opp_overlap 662395 662398 ATTATTTATTTAAAT TAATTTTTAG TAA CTAGAAATTA TTATTTTTGTTTGAT P9301_07491 662537 - 662418 - | hypothetical protein P9301_07501 662771 - 662589 - | hypothetical protein P9301_07511 663072 - 662860 - | hypothetical protein P9301_07521 663490 - 663254 - | DDT domain-containing protein TERM 445 663435 - 663448 + g 81 -3.8 -5.56673 | CCTAAATTTTCTTCT TGGG AGGGAG CCCA TTTTTTATTCTCCAT P9301_07531 663644 - 663474 - | hypothetical protein P9301_07541 663911 - 663705 - | hypothetical protein P9301_07551 664086 - 664751 + | short-chain dehydrogenase/reductase P9301_07561 664993 - 664853 - | hypothetical protein TERM 446 665029 - 665055 + r 100 -10.9 -5.68039 | opp_overlap 665029 ACTTAATATTTAAAA GCTCTGCATCT CGTGA AGTTGCAGAGC TTTTTTTATGAATTT TERM 447 665055 - 665029 - R 100 -11.6 -4.28656 | opp_overlap 665029 ACTTAATATTTAAAA GCTCTGCATCTC GTG AAGTTGCAGAGC TTTTTTTATGAATTT P9301_07571 665539 - 665285 - | hypothetical protein P9301_07581 665766 - 665539 - | D12 class N6 adenine-specific DNA met P9301_07591 666012 - 665857 - | hypothetical protein P9301_07601 666280 - 666029 - | DnaJ domain-containing protein TERM 448 666231 - 666245 + g 73 -4.3 -4.98857 | CCGTTTGCTTTGGCG GCTTT GTTTA AAAGC TTTTTGTAGTTGACT P9301_07611 666695 - 666570 - | hypothetical protein TERM 449 666661 - 666672 + g 77 -4.4 -5.13521 | TCTTTTTTGATTTCG GGAT TTAA ATCC TTTTTTGCCTCGTTT TERM 450 666750 - 666728 - H 87 -10 -3.42605 | overlap 666726 TTTATTTAAAAGACA TTTGAGATCA TAG TGATCCCAAA AAAAAATTGTGGATA TERM 451 667217 - 667194 - H 72 -6.2 -4.4078 | opp_overlap 667194, overlap 667210 TTTCTCGAACTAAAA CTTAATCAAA TAAA TTTAATTAAG TTAATTATTCAAAAT P9301_07621 667231 - 667467 + | hypothetical protein P9301_07631 667490 - 667732 + | hypothetical protein P9301_07641 667944 - 667753 - | hypothetical protein P9301_07651 668354 - 668043 - | LysM domain-containing protein P9301_07661 668637 - 669020 + | hypothetical protein P9301_07671 669028 - 669120 + | hypothetical protein P9301_07681 669117 - 669254 + | hypothetical protein P9301_07691 669376 - 669729 + | hypothetical protein P9301_07701 669806 - 669937 + | hypothetical protein P9301_07711 670121 - 671176 + | VIC family potassium channel protein petJ 671231 - 671584 + | cytochrome c P9301_07731 671585 - 671737 + | hypothetical protein TERM 452 673017 - 673036 + G 76 -9.4 -3.09831 | overlap 673012 673019 TTCATCCCTTGGATT TATTCCCT TAAA AGGGAATA TCCTTTTAAAATCAA P9301_07741 672109 - 673080 + | ABC transporter, substrate binding protein, phosphate TERM 453 673121 - 673138 + F 70 -7.1 -3.65832 | opp_overlap 673120 ATGACTTTCATATAC CTTTAAG TCCT CTTAAAG TCTTTTACAGCATTT pstC 673186 - 674133 + | putative phosphate ABC transporter pstA 674140 - 675033 + | putative phosphate ABC transporter pstB 675034 - 675843 + | putative phosphate ABC transporter, ATP binding subunit P9301_07781 676071 - 676226 + | hypothetical protein P9301_07791 676237 - 676383 + | hypothetical protein P9301_07801 676872 - 676570 - | hypothetical protein P9301_07811 677726 - 677076 - | Serine/threonine specific protein phosphatase TERM 454 677317 - 677335 + g 76 -5.4 -4.95155 | TCAACTGGTTCATGA CTAAAAGT GAT ATTTTTAG TTTTTCTAATATCAA TERM 455 677423 - 677441 + g 95 -6 -5.75945 | opp_overlap 677423 CGTTAGTTTTAAGTA GTTCAGGA AGA TCCTCAAC TTTTTTTTGAAGAAT P9301_07821 680213 - 677727 - | DEAD/DEAH box helicase domain-containing protein TERM 456 678341 - 678329 - G 85 -4.9 -5.61881 | opp_overlap 678329, overlap 678323 GTGTAAAAACAAAAA GATTT GAT AAATC CTTGGTTTTATATAT TERM 457 678436 - 678456 + g 72 -2.6 -5.32565 | CGTAATGAATTGAGT TCAGGATT TAAGC AATCATGA TTTTTTAGTTCGTTG TERM 458 680003 - 680032 + g 84 -10.9 -3.14931 | gap 1 CACTTTTATTATTTT TGGGATCTTCTATC TTT GATAGA-GGTCCCA TTAATGCAGCATAAG TERM 459 680160 - 680178 + g 74 -6.2 -4.38092 | opp_overlap 680159 TGTGGAGAAAAACTG TTTAATTT TAG AAATTAAA TTATTTTGCTTATTA P9301_07831 681850 - 680210 - | ATP-dependent DNA ligase TERM 460 681177 - 681195 + g 73 -9 -2.87501 | opp_overlap 681174, overlap 681174 681172 TCATTTATTGAATTT TTGAAGAT TTT ATCTTCAA TAGTATTTGCTAGAA P9301_07841 682839 - 681853 - | beta-lactamase fold exonuclease P9301_07851 683289 - 682876 - | COMC family protein TERM 461 683308 - 683320 + r 80 -3.5 -5.9218 | overlap 683289 AAGTATTTTTACTTA TAATA AAT TATTA TTTTTTTCTTCTGTG P9301_07861 683655 - 683374 - | major surface glycoprotein P9301_07871 685072 - 683753 - | hypothetical protein TERM 462 683887 - 683901 + g 72 -7.2 -3.82117 | opp_overlap 683887, overlap 683885 GTTTTTTTGAGAGAA CTAAAG CCT CTTTAG TCTTTTGTAAATGGG TERM 463 684745 - 684768 + g 74 -4 -5.13527 | CATCCTTTAAATTGA TTAATTCATT ATTC AGTGAGTTAA TTTTATTTGTTGCTT TERM 464 685049 - 685071 + g 74 -4.2 -5.26875 | GAAAGTTTTGCCGCA TGAAGGACAT TTA ATATCTTTCA TTTTTTAATTACAAA P9301_07881 685572 - 685204 - | CopG family protein P9301_07891 685801 - 686004 + | hypothetical protein TERM 465 686038 - 685996 - T 79 -4.7 -5.52384 | gap 1, opp_overlap 685987 685996 686002 686008 TTTTCATTAAAAAAA TTTCAATAATT-ATTTTAAA TTTT TTTAAAATTAATTATTTAAA ATTATTCTTAATTAA P9301_07901 686258 - 686061 - | hypothetical protein TERM 466 686194 - 686209 + g 82 -2.6 -5.9663 | TTTTGATCTTTAAGA TTTGAA TTAG TTCGAA TTTTTTTTGATGTTT P9301_07911 686373 - 686570 + | hypothetical protein P9301_07921 686787 - 686593 - | hypothetical protein P9301_07931 686930 - 687112 + | hypothetical protein P9301_07941 687416 - 687288 - | hypothetical protein P9301_07951 687800 - 687426 - | alpha-2-macroglobulin family protein P9301_07961 687985 - 687809 - | hypothetical protein P9301_07971 688504 - 688067 - | hypothetical protein TERM 467 688144 - 688163 + g 74 -2.2 -5.65496 | overlap 688159 GCATTTTTAATTCCC TATTATTG ATTT CAATTATA TTTTTATTTTTAATA TERM 468 688308 - 688318 + g 86 -4 -5.79588 | opp_overlap 688308 TCATTTTTAATAAAT TCTT TAG AAGA TTTTTTTGCTTTTAA P9301_07981 688633 - 688902 + | hypothetical protein TERM 469 688892 - 688908 + T 71 -6.7 -4.06562 | opp_overlap 688891 688888, overlap 688878 688888 TTTTCGAATCAGAAT TTGAAAT TTA ATTTCAA TTTCTAATTACCGTT P9301_07991 689441 - 689163 - | hypothetical protein petN 689558 - 689659 + | cytochrome b6-f complex subunit PetN P9301_08011 690456 - 689803 - | Thf1-like protein P9301_08021 690492 - 691079 + | ATP-dependent Clp protease proteolytic subunit P9301_08031 692989 - 691076 - | FtsH ATP-dependent protease-like protein TERM 470 692854 - 692825 - G 78 -5.7 -4.75776 | opp_overlap 692825 AATGTAATCTAAAAA TCTGCCGTAACTA ACTC TTGCTACTGCAGA ATTCCTGGGTGCAAC P9301_08041 693097 - 693306 + | hypothetical protein P9301_08051 694525 - 693308 - | insulinase family protein TERM 471 693834 - 693848 + g 72 -8.6 -3.08535 | opp_overlap 693830 693834, overlap 693833 693844 CTTTTACGAGAGCAA GTTTGG TTG CCAAAC ATTATTATTGTTTGA TERM 472 693848 - 693834 - G 74 -8.6 -3.29471 | opp_overlap 693834 693833 693844, overlap 693830 CTTTTACGAGAGCAA GTTTGG TTG CCAAAC ATTATTATTGTTTGA P9301_08061 695769 - 694525 - | Zn-dependent peptidase TERM 473 696443 - 696428 - g 72 -2.6 -5.42862 | AGATTTTCAAAAAAA TTATTG TGCG CAACAA ATGAAAAATGAAAAG pcyA 695811 - 696536 + | phycocyanobilin:ferredoxin oxidoreductase P9301_08081 696536 - 697450 + | ABC transporter P9301_08091 697450 - 698622 + | ABC-transporter, membrane spanning component TERM 474 698678 - 698662 - g 71 -2.3 -5.46129 | TAATAAATCAAAAAA TAATGTT AAA AACCTTA AAACAGTCTCAATAA P9301_08101 698636 - 699364 + | ABC transporter, ATP-binding component P9301_08111 699383 - 699532 + | hypothetical protein P9301_08121 699594 - 700505 + | glycosyl transferase family protein rpsB 700633 - 701337 + | 30S ribosomal protein S2 TERM 475 701349 - 701334 - f 77 -3.4 -5.63517 | TGCCGAAAGAAAAAA TTAAAT TCAA ATTTAA AACTTACTATCCACT tsf 701382 - 702038 + | elongation factor Ts TERM 476 702311 - 702296 - gf 75 -4.8 -5.09685 | TTGAAAAAAAAATAA GTAAAT TAAT ATTTAC GAATTTGCCCTTTTT P9301_08151 701974 - 703125 + | adenylate cyclase TERM 477 703309 - 703297 - g 75 -2.7 -5.58074 | overlap 703298 GAATCATTAAAAAAA CTAGA TAA TCTAA ATCTCTCAGACGAAT TERM 478 704612 - 704595 - g 100 -7.1 -5.41143 | opp_overlap 704595 704597 TACTCCTCAAAAAAA GAGAAAA GAAA TTTTCTC TAATTTGAACAATGG TERM 479 704870 - 704857 - g 70 -8.1 -3.16608 | opp_overlap 704856 704859, overlap 704849 AGTCAAATTACGGAA CTCCC TCCT GGGAG AGTTCCTATAACTAC recG 703147 - 705603 + | ATP-dependent DNA helicase recG ddpX 705661 - 706344 + | D-ala-D-ala dipeptidase sir 708135 - 706348 - | sulfite reductase subunit beta TERM 480 707016 - 707031 + g 74 -5.4 -4.78205 | opp_overlap 707013 707016 CTAGGTAATCAATAA GAGCCT TATC AGGTTC TTTTCTAATTTTTTT TERM 481 709087 - 709106 + G 70 -4.4 -4.85599 | opp_overlap 709102 CAGAGATACGTTCCT CTTTTATT GAAA AATGAAAG TTTTTCTAAACTAGA glyS 708223 - 710385 + | glycyl-tRNA synthetase beta subunit chlP 711706 - 710366 - | aromatic-ring hydroxylase (flavoprotein monooxygenase) P9301_08211 711985 - 712533 + | putative carboxypeptidase TERM 482 712532 - 712568 + F 100 -8.3 -5.42862 | opp_overlap 712535, overlap 712535 CAAATAGAAAATTAT AAATCTAATTGATTAAT TTA ATTATTCAATTAGATTA TTTTTTTCAAAGTCT TERM 483 712565 - 712535 - f 95 -10 -4.24984 | opp_overlap 712535 712532 ATAGAAAATTATAAA TCTAATTGATTAAT TTA ATTATTCAATTAGA TTATTTTTTTCAAAG TERM 484 712535 - 712565 + F 100 -10 -4.79949 | opp_overlap 712535, overlap 712532 ATAGAAAATTATAAA TCTAATTGATTAAT TTA ATTATTCAATTAGA TTATTTTTTTCAAAG TERM 485 713383 - 713370 - g 71 -2.3 -5.37345 | opp_overlap 713370 TGGAACTATAAAAAA TGGCC AACA GGCTA GTTTAATTAAAGAAA typA 712663 - 714459 + | tyrosine binding protein P9301_08231 714471 - 714839 + | hypothetical protein P9301_08241 714919 - 715653 + | ABC transporter ATP-binding protein ccmC 715765 - 716694 + | putative heme transporter TERM 486 716684 - 716714 + T 78 -7.9 -4.21989 | gap 1, overlap 716686 ATAGTTATGGATGGA TATT-TGGATGATT TCTT AATCATCCAGAATA TTTATTGAGGTTCTG TERM 487 716686 - 716711 + T 80 -9.9 -2.8136 | overlap 716684 AGTTATGGATGGATA TTTGGATGATT TCTT AATCATCCAGA ATATTTATTGAGGTT rpe 717474 - 716716 - | ribulose-phosphate 3-epimerase TERM 488 716892 - 716911 + g 76 -3.6 -5.48825 | opp_overlap 716892 TTATCCCACCATCAA CTTCAATG TCGA CATTTAAG TTTTTTTCGATAATA TERM 489 717622 - 717592 - H 93 -10 -3.85864 | overlap 717593 TTACTAGCATAATAA TTCTCATAAAAAAT GTC ATTTTTTATGAGAT CATACTCAAAACCTT TERM 490 717621 - 717593 - H 93 -13.5 -2.91036 | overlap 717592 TACTAGCATAATAAT TCTCATAAAAAAT GTC ATTTTTTATGAGA TCATACTCAAAACCT glpX 717662 - 718663 + | fructose 1,6-bisphosphatase II TERM 491 719537 - 719511 - g 74 -3.9 -5.30575 | opp_overlap 719511 719515 CAAAAATTGAAAAAA TAAATTTGAGT AATAG ACTTAAATTTA TTGATATTGGTGTGC hemA 718682 - 719992 + | glutamyl-tRNA reductase TERM 492 720361 - 720347 - g 72 -7.1 -3.84996 | opp_overlap 720351 AACATATAATTTAAA TGGCC CTTTC GGCCA AGGATTTGTGGAGGT TERM 493 721215 - 721225 + G 70 -8.2 -3.06492 | opp_overlap 721213 721212 GAATTAAGAAAAGGG GGCG GAA CGCC TCTTGGAGTAGGTGA TERM 494 721400 - 721388 - g 76 -6.3 -4.68593 | TGTAGTAGTTAAAAA TGCAA CTA TTGCA AACGGAACTGTTATT glgC 720123 - 721418 + | glucose-1-phosphate adenylyltransferase gnd 721514 - 722932 + | 6-phosphogluconate dehydrogenase P9301_08311 722920 - 723657 + | putative 6-phosphogluconolactonase (DevB, Pgl) P9301_08321 723688 - 724236 + | hypothetical protein P9301_08331 724226 - 724612 + | putative coat protein ilvD 726307 - 724634 - | dihydroxy-acid dehydratase TERM 495 724983 - 724999 + g 82 -9.4 -3.72784 | ATTTCTCTCATGCCT GGCCCT CCTAC AGGGCC TTCGTTTCTTATGAC TERM 496 725093 - 725108 + g 71 -3.2 -5.15634 | overlap 725094 AAAAATCTTAGCGGG ACCTGT TAAT ACAGGG TTTTTTACTCCGCTA TERM 497 726154 - 726166 + g 71 -7.7 -3.51879 | opp_overlap 726153 726154, overlap 726153 CTAACTTATTTAAAC CCATG TTG CATGG TGTTATTGTGCTGTA P9301_08351 726621 - 726331 - | hypothetical protein upp 727268 - 726651 - | putative uracil phosphoribosyltransferase TERM 498 726855 - 726871 + g 71 -6.7 -4.07455 | ATCAACACCTAATTC CTTTAAT TTA ATTAAAG TTTCTAATGTTGCTG P9301_08371 727332 - 727844 + | hypothetical protein cobW 727854 - 728918 + | putative cobalamin synthesis protein P9301_08391 728965 - 729129 + | hypothetical protein purS 729229 - 729483 + | phosphoribosylformylglycinamidine synthetase PurS P9301_08411 729485 - 730150 + | phosphoribosylformylglycinamidine synthase TERM 499 730188 - 730140 - T 100 -20.2 -3.38604 | gap 1, opp_overlap 730155, overlap 730155 CATTAAAATCATTAA TATTGAAATAAAAAAGACCCCCA ATTT TGGGGGTCTTTTTTATTT-AATA TGGGAAGAAATTAGA TERM 500 730174 - 730155 - T 100 -13.6 -5.65927 | opp_overlap 730155, overlap 730140 TATTGAAATAAAAAA GACCCCCA ATTT TGGGGGTC TTTTTTATTTAATAT TERM 501 730155 - 730174 + T 100 -13.6 -5.69793 | opp_overlap 730140 730155 TATTGAAATAAAAAA GACCCCCA ATTT TGGGGGTC TTTTTTATTTAATAT cbbA 731272 - 730199 - | fructose-1,6-bisphosphate aldolase P9301_08431 732462 - 731365 - | putative oxidoreductase P9301_08441 732860 - 732465 - | hypothetical protein accD 733743 - 732862 - | acetyl-CoA carboxylase subunit beta TERM 502 733568 - 733582 + g 72 -8.6 -3.14881 | TCGCTATTTATCCTA TTGTGG TGT CCACAA TTACTGCAAACATTG prkB 734780 - 733884 - | phosphoribulokinase leuB 735943 - 734870 - | 3-isopropylmalate dehydrogenase TERM 503 735403 - 735420 + g 72 -7.1 -3.90086 | TTTTATTTCTTTGGT TAGCAAT TTTT ATTGCTA TTTCGGTTATTCTTT lpxD 737006 - 735972 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase proB 738108 - 737026 - | gamma-glutamyl kinase P9301_08501 738599 - 738105 - | HAD superfamily hydrolase TERM 504 738269 - 738283 + g 72 -5.7 -4.49556 | TAATGGCTATATTTT TTGGC TCTCT GCCAA TTTCTTTGATAGCAG P9301_08511 739141 - 738605 - | hypothetical protein TERM 505 738632 - 738648 + g 72 -5.9 -4.3898 | TTTTTCAAGCTCAGT TTCAATC AAA GGTTGAA TTTTATCGAACTCAT P9301_08521 739629 - 739168 - | endonuclease TERM 506 739391 - 739369 - G 84 -10 -3.53031 | opp_overlap 739369 739365, overlap 739365 TTCATTTGAAAGTAA TTGACCGTAA TTT TTACAGTCAA TAGCTTGAGTGGTCA P9301_08531 740681 - 739626 - | hypothetical protein TERM 507 739855 - 739870 + g 75 -4.8 -4.94222 | AAATATGAAACAGGT GATTTT TCAA AAAATC TTTTTATAAATTCTT P9301_08541 741848 - 740682 - | hypothetical protein P9301_08551 742407 - 741859 - | hypothetical protein P9301_08561 744038 - 742422 - | hypothetical protein hisA 744885 - 744118 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 508 744514 - 744528 + g 79 -7.2 -4.50627 | opp_overlap 744513 744514 744516 ATCTATTCCAACAAT TATCCT TCC AGGATA TTTATTTGATAAGTC TERM 509 745373 - 745358 - g 76 -6.2 -4.60797 | GTTTGAGACAGAAAA TTGGTT GATA AACCAA AAAATTCCTTTTACA P9301_08581 744978 - 745898 + | putative mRNA binding protein pgsA 746411 - 745872 - | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase TERM 510 747181 - 747212 + G 77 -3.9 -5.50499 | TCTGAACAAGCAAAA TTGGATAACTTAA TTTCAT TTAAGTAATCTAA TTTTTTTAACTATCA P9301_08601 746596 - 747207 + | glutaredoxin P9301_08611 747406 - 747218 - | hypothetical protein P9301_08621 748092 - 747433 - | putative NADH-flavin reductase nth 748782 - 748129 - | putative endonuclease TERM 511 748508 - 748524 + g 70 -4.5 -4.88407 | opp_overlap 748508 AATAGTTTAGATAAG TTAAAGA TGT TCTTTGA TTTTTGATTAGATAG TERM 512 749885 - 749899 + G 81 -4.4 -5.39721 | opp_overlap 749885, overlap 749898 TACTCTTTCAATTAA TAAAAA TAG TTTTTA TTTTTTATATCCTGG potA 748878 - 749936 + | ABC transporter ATP-binding protein P9301_08651 750180 - 750734 + | ferritin P9301_08661 750974 - 750720 - | hypothetical protein P9301_08671 751602 - 751015 - | Crp family regulatory proteins modF 752723 - 751935 - | ABC transporter ATPase TERM 513 752074 - 752092 + g 73 -4.6 -4.94902 | overlap 752075 TTGCCTTCTTTTAGC ATTATGAC CCG GTCATAAA TTTTTGTAATCGTTG TERM 514 752075 - 752091 + g 73 -8.1 -3.55857 | overlap 752074 TGCCTTCTTTTAGCA TTATGAC CCG GTCATAA ATTTTTGTAATCGTT hcaE 754150 - 752828 - | Rieske iron-sulfur protein 2Fe-2S subunit P9301_08701 754136 - 754279 + | hypothetical protein P9301_08711 754502 - 754308 - | hypothetical protein P9301_08721 754870 - 755211 + | S1 RNA-binding domain-containing protein P9301_08731 755416 - 755234 - | hypothetical protein P9301_08741 755580 - 755729 + | hypothetical protein TERM 515 755754 - 755726 - T 80 -9.2 -3.2635 | opp_overlap 755722 755730, overlap 755724 755722 AAAAAAATACATATA TTAATCTTTTTT TTAGT AAAAAAGATTAA TCAAATTCTATACCA P9301_08751 756047 - 755751 - | hypothetical protein TERM 516 755999 - 756016 + g 72 -2.8 -5.34309 | GAATTCTCTTCTCAA TCAATT CATTTA AATTGA TTTTTATTTCGTAAT TERM 517 756035 - 756059 + g 77 -2.9 -5.68489 | TTATTTCGTAATCTT GATGTACAGTC ATT GATTTTATATC TTTTTTATTATTCTA P9301_08761 756290 - 756141 - | hypothetical protein P9301_08771 756367 - 756774 + | hypothetical protein P9301_08781 756902 - 757216 + | hypothetical protein P9301_08791 757621 - 757794 + | hypothetical protein P9301_08801 757800 - 757910 + | hypothetical protein P9301_08811 758053 - 758232 + | hypothetical protein livF 758975 - 758265 - | putative ATP-binding subunit of urea ABC transport system urtD 759727 - 758978 - | putative ATP binding subunit of urea ABC transport system urtC 760850 - 759720 - | putative membrane protein of urea ABC transport system livH 762004 - 760850 - | putative urea ABC transporter TERM 518 761371 - 761394 + g 71 -6.9 -4.0616 | TTATCATTAATCTTG TTTTAGGAA ATGCAG TTCCTAAAA TTTCTACTTGACCTC TERM 519 762061 - 762036 - R 100 -13.5 -4.52589 | opp_overlap 762036 762041, overlap 762041 TTTGTTTATATAAAA TAAAAGGAGGT GTTA ACCTCCTTTTA TTTTGAAGCATAGGT TERM 520 762036 - 762061 + r 100 -13.5 -4.09864 | opp_overlap 762036 762041, overlap 762041 TTTGTTTATATAAAA TAAAAGGAGGT GTTA ACCTCCTTTTA TTTTGAAGCATAGGT TERM 521 762041 - 762056 + r 100 -9 -5.07652 | opp_overlap 762041 762036, overlap 762036 TTATATAAAATAAAA GGAGGT GTTA ACCTCC TTTTATTTTGAAGCA TERM 522 762056 - 762041 - R 100 -9 -5.23292 | opp_overlap 762036 762041, overlap 762036 TTATATAAAATAAAA GGAGGT GTTA ACCTCC TTTTATTTTGAAGCA TERM 523 762069 - 762099 + r 71 -5.6 -4.67635 | overlap 762072 TCCTTTTATTTTGAA GCATAGGTTTTAAT TAA ATTAAAGCTTATAC TTTTCTCCTTTTGAA P9301_08861 763364 - 762087 - | putative urea ABC transporter, substrate binding protein ureG 764104 - 763493 - | urease accessory protein UreG ureF 764794 - 764108 - | urease accessory protein UreF ureE 765236 - 764787 - | urease accessory protein UreE TERM 524 764812 - 764835 + g 74 -3.2 -5.48063 | overlap 764814 764816 CTATGGGCACCTCTT TCCGGAAAAA ACTT TTTTTTCGTA TTTTTTATATTAACT TERM 525 764814 - 764833 + g 72 -5.8 -4.36863 | overlap 764812 764816 ATGGGCACCTCTTTC CGGAAAAA ACTT TTTTTTCG TATTTTTTATATTAA TERM 526 764960 - 764986 + g 77 -8.2 -3.80083 | opp_overlap 764963 764978, overlap 764963 GGTAAGCAGTTTTAA TAAGTTCAATTT TAG AATTTGAACTTA TTTCAATTAAATTTT TERM 527 765892 - 765912 + G 87 -7.6 -4.77986 | opp_overlap 765894 GTTATGCGGCCAAGT CAGGTATG GATTA CATGCCTG TTTTTGGATCTTTAA ureD 765285 - 766187 + | urease accessory protein UreD ureA 766238 - 766540 + | urease subunit gamma ureB 766543 - 766863 + | urease subunit beta TERM 528 768321 - 768333 + G 70 -6.3 -4.32905 | CAAGTTTCGGCCAAT CTCTT ATT AAGAG TTCTTTTACCTTTTT ureC 766868 - 768577 + | urease subunit alpha P9301_08941 769800 - 768574 - | hypothetical protein TERM 529 769185 - 769174 - G 74 -5.8 -4.6644 | AAGATATTGTAAAAA GGGA CCCT TCCC TACTAATTGCTCAAG TERM 530 769923 - 769894 - g 74 -5.3 -4.86133 | gap 1, overlap 769898 TAGATAGATTAAAAA TTG-ATAAATTGCT AAA AACAATTTATTCAA ATAATACTACAGAAG P9301_08951 769851 - 771611 + | glycoside hydrolase family protein TERM 531 772023 - 772038 + G 70 -4 -5.08824 | gap 1 ACTTAATGCGTGATA GGCACTG GAG CA-TGCC TTTTTTAAATCCGCC P9301_08961 771614 - 772411 + | mannosyl-3-phosphoglycerate phosphatase TERM 532 772647 - 772625 - g 90 -9.4 -4.26189 | opp_overlap 772628 TTATAAATTTCAAAA TAATTTTTCT GAT AGAAAAATTA TTGGAATCTCAGCTT P9301_08971 772413 - 773360 + | putative kinase P9301_08981 773451 - 773678 + | hypothetical protein TERM 533 773811 - 773828 + G 71 -5.5 -4.72729 | GAGGCTTCGTGCCTT CTGCAGC TGTC GCTGGAG TTTTAATTTTAGTTG P9301_08991 773768 - 773893 + | hypothetical protein P9301_09001 773957 - 774091 + | hypothetical protein P9301_09011 774372 - 774100 - | GRAM domain-containing protein bacA 774440 - 775240 + | bacitracin resistance protein BacA P9301_09031 776280 - 775552 - | peptide methionine sulfoxide reductase P9301_09041 778063 - 776318 - | multidrug ABC transporter TERM 534 777329 - 777313 - G 72 -7.3 -3.82499 | ATGAAATTGAGGAAA TCCCTTG TAA CAAAGGA AATAGGGTACTCGCT TERM 535 777918 - 777935 + g 71 -2.1 -5.32944 | opp_overlap 777912, overlap 777912 777920 GAAGAAAAGCCATTT TGTAATT GGTC AATTATA TTTTTTACTTCTAAG P9301_09051 778126 - 778440 + | hypothetical protein P9301_09061 778474 - 779508 + | anthranilate phosphoribosyltransferase carA 779523 - 780662 + | carbamoyl phosphate synthase small subunit TERM 536 780750 - 780769 + F 90 -10.8 -3.36273 | opp_overlap 780749 TTTCCAGAAGTTAAC GGTTTCCT TAAG AGGAAACC TTGATGTTAAGACAA P9301_09081 781000 - 781089 + | hypothetical protein P9301_09091 781086 - 781484 + | hypothetical protein P9301_09101 781489 - 782493 + | RNA methyltransferase TrmH, group 3 TERM 537 782821 - 782803 - g 82 -7.6 -4.7078 | opp_overlap 782805 TGAAGGATCTAAAAA TATTAAAC ACA GTTTAATA CGTTGTAAAAAAGAA P9301_09111 782639 - 782854 + | hypothetical protein gatA 782885 - 784333 + | glutamyl-tRNA(Gln) amidotransferase A subunit dnaE 784418 - 787915 + | DNA polymerase III subunit alpha P9301_09141 788366 - 787917 - | hypothetical protein rpsO 788645 - 788376 - | 30S ribosomal protein S15 ruvA 789355 - 788678 - | putative holliday junction DNA helicase RuvA P9301_09171 789718 - 789356 - | cAMP phosphodiesterases class-II P9301_09181 790628 - 789738 - | integral membrane protein, DUF6 TERM 538 792329 - 792340 + G 71 -3 -5.29716 | opp_overlap 792329 ATCAAATAGTCAAAA TCTT CAAA AAGA TTTTTCTTCTATTAA dnaG 790725 - 792758 + | DNA primase P9301_09201 793242 - 792775 - | Serine hydroxymethyltransferase umuC 794539 - 793253 - | putative UmuC protein umuD 794952 - 794536 - | putative SOS mutagenesis protein UmuD P9301_09231 795467 - 795051 - | hypothetical protein P9301_09241 795819 - 795487 - | hypothetical protein TERM 539 796134 - 796152 + G 82 -9.6 -3.57106 | overlap 796123 796130 AAGTTTTCACTGCAG CAGGGAGA TAT TCTCTCTG TTAATTTAGATTCGA ksgA 795876 - 796700 + | dimethyladenosine transferase TERM 540 796708 - 796698 - f 70 -2.6 -5.48054 | ATTAAAATTAAAAAA TAAA AAT TTTA AGTATATGCAAGATT TERM 541 797576 - 797560 - g 81 -4.5 -5.45726 | opp_overlap 797560 GAGACTGCAAAAAAA GAATTAA CTG CTAATTC TAAATTTTTTAAAGA ispE 796714 - 797649 + | putative 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (CMK) P9301_09271 797670 - 797972 + | hypothetical protein TERM 542 798095 - 798083 - f 70 -7.7 -3.38272 | opp_overlap 798083 TATTACTACTCATAA CCTTC GCT GAAGG AGGTTGAATTATTCA pdhB 798152 - 799135 + | pyruvate dehydrogenase E1 beta subunit secD 799139 - 800602 + | preprotein translocase subunit SecD secF 800630 - 801544 + | preprotein translocase subunit SecF P9301_09311 801563 - 801745 + | hypothetical protein P9301_09321 802792 - 801749 - | permease psb28 803159 - 802806 - | photosystem II reaction center protein Psb28 P9301_09341 804260 - 803220 - | tRNA 2-selenouridine synthase P9301_09351 804297 - 805016 + | hypothetical protein TERM 543 805110 - 805090 - g 72 -7.1 -3.90048 | overlap 805088 TCCGGGGCAAAAATA TTTTAAAAA GAT TTTTTAAAA GACCAAAAATTAACT rsbW 805065 - 805499 + | anti-sigma regulatory factor (Ser/Thr protein kinase) P9301_09371 805741 - 805478 - | hypothetical protein P9301_09381 806810 - 805755 - | methyltransferase TERM 544 806849 - 806885 + r 75 -8.4 -3.54146 | gap 1, opp_overlap 806849, overlap 806845 CCAACAAAAAAAAAA TCAATTTGAGA-ATATT TTGT GATATTTCTCAAATTGA TTAATTTAAAATATT TERM 545 806885 - 806849 - R 100 -7.7 -6.59152 | gap 1, opp_overlap 806845 806849 CCAACAAAAAAAAAA TCAATTTGAGA-ATAT TTTGTG ATATTTCTCAAATTGA TTAATTTAAAATATT glnA 808334 - 806913 - | glutamine synthetase, glutamate--ammonia ligase TERM 546 807501 - 807480 - G 70 -7.3 -3.73224 | opp_overlap 807485, overlap 807483 TGATCCTTCACCAAA GAATAGTGG CTGT CCACTCTTC CATAAACTTTGGTGA TERM 547 809202 - 809212 + G 71 -6.8 -4.14739 | TTAAGCTGTCCGCCT GGAC TAA GTCC TTTTACAATGAATAA TERM 548 809541 - 809559 + G 71 -6.8 -4.10453 | CCTGCAGTAGATGGA GATGGTTT TAG AAATCATC TTTTAAGAAAATTTG spt 808548 - 809732 + | serine:pyruvate/alanine:glyoxylate aminotransferase cumB 810222 - 809707 - | putative cytidine/deoxycytidylate deaminase TERM 549 810476 - 810488 + G 70 -6.3 -4.24294 | GAAGATTTGTTTTCT GAGAT TGA ATCTC TTTTGAATAATTCAT gadB 810266 - 811651 + | pyridoxal-dependent decarboxylase family protein P9301_09431 811655 - 811792 + | hypothetical protein P9301_09441 813284 - 811785 - | GTPase SAR1 and related small G protein TERM 550 813657 - 813642 - R 73 -3.4 -5.47218 | opp_overlap 813634 CTTTATTTAAAAAAA TTTTAT GATT ATAAAA TATAAAATATTTCGT P9301_09451 814313 - 813744 - | hypothetical protein salY 815561 - 814329 - | putative ABC transporter pykF 817344 - 815554 - | pyruvate kinase TERM 551 817299 - 817310 + g 74 -3 -5.40014 | GAGTTGCAGGGCCAA TAGT TGCT ACTA TTTTTGTTCTTCTTT P9301_09481 817406 - 817735 + | pyrophosphatase P9301_09491 818016 - 817738 - | hypothetical protein P9301_09501 818312 - 818055 - | hypothetical protein ilvA 820169 - 818628 - | threonine dehydratase TERM 552 819986 - 819997 + g 70 -4.4 -4.77165 | CAAGCTGTGAATTAG TGAG CTTA CTCA TTTTGTTATAGGCAC dxs 820286 - 822175 + | 1-deoxy-D-xylulose-5-phosphate synthase psaK 822455 - 822195 - | photosystem I PsaK protein (subunit X) P9301_09541 822857 - 822522 - | hypothetical protein P9301_09551 823152 - 822850 - | hypothetical protein P9301_09561 823690 - 823157 - | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergens family protein rpmB 823932 - 823696 - | 50S ribosomal protein L28 htpG 825876 - 823972 - | heat shock protein 90 TERM 553 825234 - 825247 + g 74 -3.1 -5.3321 | ATTCACTAGGTTGTT TTCTC CAGG GAGGA TTTTTCTTATTAATT hisZ 827145 - 825994 - | ATP phosphoribosyltransferase regulatory subunit suhB 828012 - 827164 - | myo-inositol-1(or 4)-monophosphatase P9301_09611 828392 - 828018 - | ferredoxin, petF-like protein P9301_09621 828743 - 830740 + | molecular chaperone DnaK, heat shock protein hsp70 TERM 554 830993 - 831007 + GF 70 -7.2 -3.62723 | overlap 830984 AGGTTTTCCTGATTT TCAAGA TTA TCTTGA TTCATTATTTGGATA P9301_09631 830691 - 831650 + | DnaJ2 protein TERM 555 831686 - 831699 + G 71 -5.3 -4.614 | AAAATCGATACTTAT GAACA TATT TGTTC TTTTATATAATTCAG P9301_09641 831684 - 832067 + | hypothetical protein P9301_09651 832107 - 832544 + | cyclophilin-type peptidyl-prolyl cis-trans isomerase ribB 834273 - 832549 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein TERM 556 832861 - 832847 - G 74 -5.7 -4.62069 | opp_overlap 832846 GGTCGATTCCAAAAA GCCAA TAATC TTGGC GTACTTTCTAGTTTA argC 834362 - 835417 + | N-acetyl-gamma-glutamyl-phosphate reductase purN 836057 - 835401 - | phosphoribosylglycinamide formyltransferase pgi 836239 - 837822 + | glucose-6-phosphate isomerase leuS 840389 - 837819 - | leucyl-tRNA synthetase TERM 557 838527 - 838544 + g 82 -8.5 -3.9749 | overlap 838525 TGACTTAGACATCTT CTCGAAA AGAA TTTCGAG TTTGGTATTGTCAAT TERM 558 840052 - 840073 + g 73 -8.1 -3.47029 | TGAGAAATATTTTTT TTAGTCCAG ACAC TTGGACTAA TTCCTCTTTCAATCG TERM 559 840809 - 840799 - g 72 -2.6 -5.3321 | AATGAATAATAAAAA TATA GAA TATA AAATTGAGACTAAAG dapF 840497 - 841357 + | diaminopimelate epimerase P9301_09721 841357 - 842529 + | class-V aminotransferase family cysteine desulfurase P9301_09731 842529 - 843155 + | hypothetical protein TERM 560 843788 - 843774 - g 70 -4.4 -4.75404 | opp_overlap 843774 AAATTTTATTAAAAA TTATTT AAA AAATAA ATTTCCAAATTCAAA dacB 843163 - 844380 + | D-Ala-D-Ala carboxypeptidase 3 coaD 844861 - 844388 - | putative pantetheine-phosphate adenylyltransferase TERM 561 844768 - 844734 - G 71 -8.8 -2.95073 | overlap 844733 844764 CTTTCAAGATTAAAT GTTGGTGTTTTAGA GGTATTT TCTAAAACAGCAAC TACTAGTTTGCCAAA TERM 562 844959 - 844949 - g 90 -4 -5.98781 | TAGAAGCAAAAAAAA TCTT ATT AAGA AAAATACCTCACGGA P9301_09761 844921 - 845409 + | hypothetical protein TERM 563 845606 - 845596 - g 80 -5.4 -5.22039 | GGTAAATCTAAAAAA CTAC GCA GTAG AGTAAGTAGTTATTT uvrC 845419 - 847377 + | excinuclease ABC subunit C P9301_09781 847466 - 848032 + | hypothetical protein P9301_09791 848025 - 848672 + | metal-dependent phosphoesterase cobN 852411 - 848674 - | cobalamin biosynthetic protein CobN TERM 564 849055 - 849069 + g 76 -7.2 -4.2828 | opp_overlap 849055 849054 TTGTAATTTTGAAAT TTTGGA TAA TCCAAA TTTTGATAAATCACC TERM 565 850438 - 850452 + g 74 -2.9 -5.32565 | overlap 850445 TTTATTATTTAAAGT GATTT CGTTA AAATC TTTTTTAATTAATTC TERM 566 852878 - 852889 + G 72 -7.2 -3.83998 | opp_overlap 852865 TAGGAGATTATCTAT CCCC AGAT GGGG TTTCATGTAGAATGA ilvE 852484 - 853398 + | branched-chain amino acid aminotransferase metH 853412 - 856978 + | putative methionine synthase P9301_09831 857206 - 856988 - | hypothetical protein P9301_09841 857306 - 857689 + | hypothetical protein apa2 857738 - 858568 + | putative ATP adenylyltransferase P9301_09861 858685 - 858572 - | hypothetical protein TERM 567 858827 - 858807 - H 70 -4.1 -5.16969 | opp_overlap 858807 GACAGAAAAAATAAA TTGGTTTTA ATT TAAAAACAA TATTCCTTGTGGACT P9301_09871 858898 - 859908 + | DnaJ domain-containing protein P9301_09881 860590 - 860330 - | carboxylesterase pheT 863128 - 860684 - | phenylalanyl-tRNA synthetase beta chain rpmG 863256 - 863423 + | 50S ribosomal protein L33 rpsR 863440 - 863661 + | 30S ribosomal protein S18 P9301_09921 863707 - 864891 + | ribonuclease II TERM 568 866104 - 866092 - g 82 -4.9 -5.4148 | overlap 866085 CAAATAAGGAAAAAA TTTTC AAT GAAAA AAAATTAGAGAATTT metG 864960 - 866504 + | methionyl-tRNA synthetase P9301_09941 866488 - 867111 + | SMC domain-containing protein P9301_09951 867734 - 867108 - | hypothetical protein P9301_09961 867846 - 868157 + | fusion glycoprotein F0 cobU 868168 - 868728 + | putative cobinamide kinase cspR 868731 - 869213 + | SpoU family tRNA/rRNA methyltransferase clpS 869384 - 869671 + | ATP-dependent Clp protease adaptor P9301_10001 869683 - 869934 + | hypothetical protein P9301_10011 870080 - 869931 - | hypothetical protein P9301_10021 870286 - 870435 + | hypothetical protein P9301_10031 870848 - 870459 - | hypothetical protein TERM 569 871240 - 871252 + r 70 -6.3 -4.22375 | opp_overlap 871236 871234 871240 TCATATAAACATTAA TAGTG TGA CACTA TTTATTCCATAATGT P9301_10041 871616 - 871254 - | hypothetical protein P9301_10051 871693 - 871845 + | hypothetical protein P9301_10061 872021 - 871842 - | hypothetical protein P9301_10071 872185 - 872358 + | hypothetical protein P9301_10081 872645 - 872460 - | hypothetical protein P9301_10091 872843 - 873013 + | hypothetical protein P9301_10101 873077 - 873298 + | RNA-dependent RNA polymerase-like protein P9301_10111 873461 - 873303 - | hypothetical protein ahpC 873756 - 874340 + | thioredoxin peroxidase P9301_10131 875108 - 874356 - | hypothetical protein TERM 570 874427 - 874439 + g 85 -9.1 -4.08767 | opp_overlap 874425 AAAAGGTCATAACTT CCCCA ATT TGGGG TTTTGGCACGATCCA TERM 571 874848 - 874858 + g 70 -4 -5.04222 | opp_overlap 874848 ATTTATTGCTACTAA GATT AAT AATC TTTTTCCTTTAATTA P9301_10141 876895 - 875141 - | cell division protein FtsH4 TERM 572 876393 - 876421 + g 90 -9.1 -4.63748 | overlap 876418 ATTAGAAGAACACCC TTTGGAAATTTTG CCC CAAGATTTTCAAA TTTCTTTGGTTCTTT rpmF 877027 - 877197 + | 50S ribosomal protein L32 P9301_10161 877527 - 877201 - | hypothetical protein TERM 573 877490 - 877480 - G 72 -2.6 -5.50313 | TAGAAAACCAAAAAA TAAA TTA TTTA ACTGGTTGGTAATCC P9301_10171 878275 - 877514 - | putative CbbY-like protein P9301_10181 878451 - 878798 + | Fe-S-cluster oxidoreductase TERM 574 878854 - 878824 - g 81 -4.2 -5.69976 | opp_overlap 878827 878829, overlap 878827 878829 878831 AGAAAAAAAAGAAAA CAATTTAGAAAAAA GTT TTTTTTCTATATTC ATAACGACTTTTACA TERM 575 878851 - 878827 - g 78 -5.9 -4.78984 | opp_overlap 878827 878829, overlap 878824 878829 878831 AAAAAAAGAAAACAA TTTAGAAAAAA GTT TTTTTTCTATA TTCATAACGACTTTT TERM 576 878829 - 878849 + G 72 -8.5 -3.13899 | opp_overlap 878827 878824 878829 878831, overlap 878827 AAAAAGAAAACAATT TAGAAAAAA GTT TTTTTTCTA TATTCATAACGACTT P9301_10191 878795 - 879121 + | hypothetical protein P9301_10201 879122 - 879430 + | hypothetical protein vacB 879468 - 881729 + | putative acetazolamide conferring resistance protein Zam TERM 577 881784 - 881774 - f 73 -2.6 -5.65513 | opp_overlap 881774 TATTAACCAAAAAAA TTTA AGA TAAA TTTTTAGAATTATGT P9301_10221 881796 - 882242 + | hypothetical protein P9301_10231 882307 - 882885 + | hypothetical protein TERM 578 883047 - 883030 - g 73 -7.7 -3.75863 | AAAAGCCCCAGCAAA GGAGACA ATTT TGTCCCC AAGATTCTATACAAC pniL34 882965 - 884137 + | magnesium-protoporphyrin IX monomethyl ester cyclase tldD 884169 - 885593 + | putative modulator of DNA gyrase; TldD TERM 579 885990 - 885960 - g 84 -3.4 -5.7946 | GTTGGAATAAAAAAA TTACTTATGCTTTT AAG AGAAGCAGAAATAA AACTATTAGAAAGCC pmbA 885597 - 886949 + | putative modulator of DNA gyrase TERM 580 887655 - 887645 - gT 74 -3.2 -5.42198 | TCTCAAAAAATAAAA GGAT TAT ACCC ACGAGCAAATACAAC terC 888636 - 887926 - | membrane protein TerC fmt 886946 - 887986 + | putative methionyl-tRNA formyltransferase P9301_10291 888407 - 888595 + | hypothetical protein mfd 888711 - 892220 + | transcriptional-repair coupling factor P9301_10311 892293 - 892454 + | hypothetical protein P9301_10321 892825 - 892457 - | nucleoside diphosphate kinase P9301_10331 893504 - 892914 - | hypothetical protein P9301_10341 893874 - 893506 - | hypothetical protein P9301_10351 894267 - 894070 - | hypothetical protein ubiH 895427 - 894273 - | 2-octaprenyl-6-methoxyphenol 4-monoxygenase UbiH TERM 581 894380 - 894366 - G 70 -4.3 -4.81523 | AAGTAAAAATGAAAA TTTCC TAATT GGAAA TAAAAAAACGTTTCT P9301_10371 896088 - 895450 - | hypothetical protein dapB 896938 - 896090 - | dihydrodipicolinate reductase TERM 582 896938 - 896950 + H 83 -3.5 -6.07627 | opp_overlap 896938, overlap 896940 896941 TAGAATTTTCAATCA TTTTT TTA AAAAA TTTTTTTTTAAAGGT chlH 897041 - 901051 + | magnesium chelatase folP 901905 - 901060 - | putative dihydropteroate synthase TERM 583 901109 - 901136 + g 81 -10 -3.14878 | opp_overlap 901103, overlap 901108 ATTTGATAATTTAAT TTGACGTTGTGG ACTC TCACAATGTCAA TATTAAATTGAGAAC tpiA 902614 - 901889 - | triosephosphate isomerase TERM 584 902263 - 902277 + g 78 -5.7 -4.85545 | TAAGTCCACTTGATT GAGCA AAAAC TGCTC TTTTGTTAATTTGCT P9301_10421 902843 - 902667 - | S4 domain-containing protein TERM 585 902835 - 902845 + g 74 -4 -5.24129 | TTTTAAGAATTGATC CAAT TTC ATTG TTTTTTATACCCAAA P9301_10431 902962 - 904608 + | ABC transporter P9301_10441 904639 - 904857 + | hypothetical protein carB 908158 - 904862 - | carbamoyl-phosphate synthase, large subunit P9301_10461 908266 - 908904 + | hypothetical protein P9301_10471 908894 - 909238 + | domain of unknown function DUF143:Iojap-related protein P9301_10481 909247 - 909741 + | hypothetical protein TERM 586 910160 - 910138 - g 76 -8.5 -3.53343 | opp_overlap 910146 AATTGTTCCGGTAAA CATGCTGCT TTTTT AGCAACATG CAAAAAAATGAATTG ansA 909742 - 910707 + | L-asparaginase II TERM 587 910852 - 910837 - f 77 -9 -3.37796 | opp_overlap 910837 CGCCACCATTTAGAA GCAGCT TCAA AGCTGC TTTTTTATTCTTCGC TERM 588 910837 - 910852 + F 100 -9 -5.64873 | opp_overlap 910837 CGCCACCATTTAGAA GCAGCT TCAA AGCTGC TTTTTTATTCTTCGC P9301_10501 911421 - 911810 + | hypothetical protein TERM 589 911840 - 911822 - f 75 -4 -5.47399 | opp_overlap 911801, overlap 911801 TTAATTCGAAAAAAA TATTTCTA AAA TAAAAATA ATTTAACTATTTTTT P9301_10511 911888 - 912883 + | putative multidrug efflux ABC transporter P9301_10521 913003 - 912857 - | hypothetical protein TERM 590 912975 - 912985 + Gg 71 -3.2 -5.27779 | TTATGGGCAATTTCA GGGA TTA TTCC TTTTTTCATGTTAAA P9301_10531 912873 - 913667 + | putative multidrug efflux ABC transporter TERM 591 913980 - 913990 + G 86 -4 -5.72053 | opp_overlap 913980 TACTTTTAAAACCTA TTGA TAG TCAA TTTTTTATTTCATTA TERM 592 914030 - 914013 - g 79 -2.7 -5.86061 | TTTCATTAAAAAAAA TAAATCC ATCC GGATTTT TAGAAATTATGCTTG P9301_10541 913664 - 914458 + | membrane protein, multidrug efflux associated P9301_10551 914728 - 914462 - | hypothetical protein P9301_10561 914955 - 914728 - | hypothetical protein TERM 593 915223 - 915242 + r 100 -9.2 -6.04419 | GGTTCCCCATCACCC GGCCCCAC ATAT GTGAGGCC TTTTTTTATTATTTT TERM 594 915290 - 915274 - R 71 -6.7 -4.15106 | opp_overlap 915269 CATTAAGGTCTAAAA GTTTTAT TAA ATAAAAC GAGTAATTCATTAAC P9301_10571 916216 - 915404 - | permease P9301_10581 916358 - 916699 + | HNH endonuclease:HNH nuclease P9301_10591 916981 - 916787 - | hypothetical protein P9301_10601 917392 - 916991 - | ATP synthase protein 8 TERM 595 917703 - 917693 - g 74 -4 -5.24551 | CTAAAGCAAGAAAAA TTGA CAG TCAA AACCCACAGGAAGCC P9301_10611 917557 - 917778 + | hypothetical protein TERM 596 918028 - 918011 - g 70 -7.1 -3.70364 | overlap 918019 918022 TACAAAAGGAGAGAA TAGGAAA ATTA TTTCCTA AGAAAAAATAAATTT P9301_10621 917812 - 918039 + | hypothetical protein P9301_10631 918139 - 918026 - | hypothetical protein P9301_10641 918265 - 918768 + | josephin TERM 597 918839 - 918826 - g 72 -2.5 -5.34655 | TAAGTAAAAATAAAA TAAAT AATA ATTTA AAAATGAATAAACCA P9301_10651 918759 - 919028 + | hypothetical protein P9301_10661 919030 - 919425 + | putative purine phosphoribosyl transferase-related protein P9301_10671 919422 - 919880 + | hypothetical protein rpsU 919964 - 920140 + | 30S ribosomal protein S21 P9301_10691 920543 - 920214 - | helix-hairpin-helix DNA-binding motif-containing protein TERM 598 920480 - 920497 + g 74 -7 -4.19704 | CTTTCTTTAAAGGCG GTGCAG GAGTTA CTGCAC TTTTAAATAAAATTG TERM 599 921003 - 921018 + G 75 -4.8 -5.05113 | opp_overlap 921003 TTAATAACAAACTAT TCAAAA AAGA TTTTGA TTTTATTTATATGAA P9301_10701 920810 - 921406 + | ATP/GTP-binding motif-containing protein P9301_10711 922561 - 921395 - | hypothetical protein P9301_10721 923385 - 922582 - | amphipathic helix repeat-containing protein TERM 600 923005 - 923017 + g 93 -3.5 -6.32976 | opp_overlap 923005 GTAAGCTATACCTAA TTTAA CTT TTAAA TTTTTTTCTTTTTTT P9301_10731 923651 - 923418 - | hypothetical protein P9301_10741 923821 - 924225 + | hypothetical protein P9301_10751 924929 - 924249 - | peptidase E TERM 601 925076 - 925056 - g 91 -5.4 -5.72254 | opp_overlap 925075, overlap 925058 GTAAAGAACAAAAAA GAGCTTGG TCTAG CCAAGCTT GGAATAACCCAAATT TERM 602 925074 - 925058 - g 85 -8 -4.47161 | overlap 925056 AAAGAACAAAAAAGA GCTTGG TCTAG CCAAGC TTGGAATAACCCAAA TERM 603 925372 - 925358 - g 72 -3.6 -5.31519 | ATACGTAAAGAAAAA GTCATT ATA AATAAC ATTTTTTTTGAAAGA P9301_10761 924950 - 925420 + | GCN5-related N-acetyltransferase P9301_10771 925431 - 925751 + | hypothetical protein TERM 604 925749 - 925769 + F 70 -4.1 -5.09426 | opp_overlap 925749 925751 GGAAAATTAATTAAC TAGTAAATA AAT TAATTACTA TTTTTTAGCCTTAGA P9301_10781 925870 - 926019 + | hypothetical protein P9301_10791 926111 - 926428 + | hypothetical protein P9301_10801 926452 - 926631 + | hypothetical protein P9301_10811 926701 - 926817 + | hypothetical protein P9301_10821 926981 - 926850 - | hypothetical protein P9301_10831 926971 - 927135 + | hypothetical protein TERM 605 927196 - 927183 - TR 90 -6.7 -5.68039 | opp_overlap 927183 AAACGCATAAAAAAA GACTC AAAT GAGTC TTTTAAAATTCATGT TERM 606 927183 - 927196 + Tr 73 -6.7 -4.21098 | opp_overlap 927183 AAACGCATAAAAAAA GACTC AAAT GAGTC TTTTAAAATTCATGT P9301_10841 927431 - 927225 - | hypothetical protein P9301_10851 927564 - 927944 + | hypothetical protein P9301_10861 928051 - 928236 + | hypothetical protein P9301_10871 928278 - 928583 + | hypothetical protein P9301_10881 928650 - 929366 + | hypothetical protein TERM 607 929687 - 929671 - g 71 -2.2 -5.4251 | opp_overlap 929671 TTTACAGATAAAAAA TGGGAC TGGAG GTACCA ATTTAATAAAGACGG P9301_10891 929491 - 929802 + | hypothetical protein pepN 929853 - 932459 + | aminopeptidase N P9301_10911 932836 - 932997 + | photosystem II reaction centre N prot P9301_10921 933212 - 933012 - | hypothetical protein purT 934481 - 933306 - | phosphoribosylglycinamide formyltransferase 2 TERM 608 933775 - 933761 - G 70 -7.2 -3.63515 | opp_overlap 933761 TCTTAGCTTCAATAA TTAAGG AAT CCTTAA TCTCTAAAGGTTGCC TERM 609 934336 - 934355 + g 72 -5 -4.81551 | gap 1, opp_overlap 934340, overlap 934340 ACTCTTGAATAATCA GCAACTTGC ATG GCAGGT-GC TTTTTCATATCGATC P9301_10941 934735 - 934493 - | lectin subunit alpha btuE 934881 - 935360 + | glutathione peroxidase P9301_10961 936035 - 935400 - | hypothetical protein P9301_10971 936475 - 936083 - | hypothetical protein P9301_10981 936647 - 937654 + | nitrogen regulation protein NifR3 family-like protein P9301_10991 937673 - 937942 + | hypothetical protein P9301_11001 938114 - 937950 - | hypothetical protein P9301_11011 938393 - 938157 - | hypothetical protein P9301_11021 938835 - 939254 + | 4-hydroxybenzoyl-CoA thioesterase family protein TERM 610 939345 - 939316 - g 71 -8.9 -2.54702 | gap 1, opp_overlap 939308 939314 939316 ATATATTTCAAGTTA TTGATT-CATATCA ATA TGATATGGAATCAA GATATCAAGAAAAAT P9301_11031 939297 - 939494 + | hypothetical protein P9301_11041 939535 - 939786 + | hypothetical protein TERM 611 940046 - 940032 - g 100 -7.2 -5.32882 | GAGGATTATAAAAAA TGGATT GGC AATCCA CCCCTTGATGAAAAA P9301_11051 939807 - 940676 + | hypothetical protein P9301_11061 941086 - 940682 - | hypothetical protein TERM 612 940884 - 940906 + g 74 -9.2 -3.14848 | opp_overlap 940872 940870, overlap 940883 AGACATGCGGGTGCA TGTAGGGAAA TAC TTTCCCAACA ATTTTGATGACACCA P9301_11071 941204 - 941329 + | hypothetical protein P9301_11081 941461 - 941754 + | virion host shutoff protein P9301_11091 942305 - 941763 - | hypothetical protein P9301_11101 942385 - 942669 + | hypothetical protein TERM 613 942919 - 942907 - g 70 -6.3 -4.34402 | TTTTTTAGAGCAAAA TGGAT TTA ATCCA TCATCAGAGAGCTTA P9301_11111 942806 - 942985 + | hypothetical protein P9301_11121 943168 - 942989 - | hypothetical protein TERM 614 943145 - 943156 + g 77 -4.4 -5.28176 | TCTACCACCGCTTTC GGTT GTAT AACC TTTTTTATCCATAAG P9301_11131 943388 - 943254 - | hypothetical protein P9301_11141 943777 - 943475 - | integrin alpha cytoplasmic region P9301_11151 943999 - 943778 - | hypothetical protein P9301_11161 944228 - 944049 - | hypothetical protein P9301_11171 944467 - 944649 + | hypothetical protein P9301_11181 944735 - 945505 + | pili assembly chaperone TERM 615 945612 - 945626 + F 95 -7.2 -5.89921 | AATACAAATAGGTTA TGTTCA TGA TGAACA TTTTTTTATTATACT P9301_11191 945823 - 945951 + | hypothetical protein P9301_11201 946131 - 945970 - | hypothetical protein P9301_11211 946602 - 946228 - | hypothetical protein TERM 616 946339 - 946366 + g 70 -7.1 -3.63341 | CAACATTTTATAGTT TGGATTTGTTG AAATTC CATCAAATCCA TTATTAAGAAATCTT P9301_11221 946765 - 946989 + | hypothetical protein P9301_11231 947272 - 947514 + | lactate/malate dehydrogenase, alpha/b TERM 617 947589 - 947601 + F 77 -4.9 -5.28778 | TAATCAATAATCTTG TTATG TTC CATAA TTTTTTATAAATAAT P9301_11241 947641 - 948048 + | putative stress-induced protein OsmC P9301_11251 948525 - 948265 - | hypothetical protein P9301_11261 949094 - 948687 - | hypothetical protein TERM 618 949230 - 949212 - H 100 -11.8 -6.13 | opp_overlap 949212 ATATCCAAAAAAAAA GATCTCTC AAA GAGAGATC TTTTTAAAATTAATT TERM 619 949212 - 949230 + H 100 -11.8 -4.68506 | opp_overlap 949212 ATATCCAAAAAAAAA GATCTCTC AAA GAGAGATC TTTTTAAAATTAATT P9301_11271 949523 - 949699 + | hypothetical protein P9301_11281 949777 - 949920 + | hypothetical protein P9301_11291 949930 - 950178 + | hypothetical protein P9301_11301 950264 - 950410 + | hypothetical protein P9301_11311 951196 - 950411 - | ABC transporter P9301_11321 951214 - 951648 + | ferric uptake regulator family protein P9301_11331 952432 - 951662 - | ABC transporter ATP-binding protein TERM 620 953895 - 953874 - g 76 -7.3 -4.2586 | TTAGATGAAGAGAAA GTTCAGGCA ATAT TTCCTGAAC AAATTCCAGCATCTA lraI 952569 - 954110 + | ABC transporter substrate-binding protein P9301_11351 954188 - 955537 + | cobalamin synthesis protein/P47K TERM 621 956470 - 956436 - g 78 -9.3 -3.37655 | gap 1, opp_overlap 956446, overlap 956434 TTTCCTAAAAAATGA CGGC-AATGGAGACCC AGTT GGGGCTGCATTCGCCG GAGATTTGGTAGGGG P9301_11361 955525 - 956598 + | WD-40 repeat-containing G-protein P9301_11371 956772 - 956617 - | hypothetical protein P9301_11381 957143 - 957045 - | hypothetical protein TERM 622 957271 - 957242 - H 80 -9.4 -3.22738 | opp_overlap 957247, overlap 957247 AATATAAGTAAGAGA TAAAAGAGGGCT TAAATT AGCCCTCTTTTT TTGTTGTAAGATGAC TERM 623 957247 - 957266 + H 100 -9.3 -5.88565 | opp_overlap 957247 957242 AAGTAAGAGATAAAA GAGGGCT TAAATT AGCCCTC TTTTTTTGTTGTAAG TERM 624 957266 - 957247 - H 93 -9.3 -4.70453 | opp_overlap 957247, overlap 957242 AAGTAAGAGATAAAA GAGGGCT TAAATT AGCCCTC TTTTTTTGTTGTAAG P9301_11391 957333 - 957608 + | DNA gyrase/topoisomerase IV, subunit-like protein P9301_11401 957866 - 957633 - | hypothetical protein P9301_11411 958134 - 957898 - | hypothetical protein P9301_11421 958045 - 958143 + | hypothetical protein P9301_11431 958263 - 959705 + | hypothetical protein TERM 625 959892 - 959872 - g 79 -9.9 -2.91264 | overlap 959875 GCTTCTAGTGACAGA GAATCTTTT GAT AAAAGATTC CCAGAGAAAAAACCT P9301_11441 959707 - 960648 + | hypothetical protein P9301_11451 960660 - 961517 + | transglutaminase-like superfamily protein P9301_11461 961692 - 962165 + | hypothetical protein P9301_11471 962249 - 962767 + | hypothetical protein P9301_11481 963130 - 962777 - | lipoprotein P9301_11491 963321 - 963130 - | hypothetical protein TERM 626 963243 - 963224 - G 71 -6.6 -4.08164 | AAAATTTTAGATAAA GTTTTTAA AGAA TTAAAAAC TAAAAAAACAGTAAA TERM 627 963282 - 963265 - G 100 -7.1 -5.37171 | opp_overlap 963281 AACAGTAAATAAAAA GAAAACA ATAA TGTTTTC TACAAGTAGATTTTT TERM 628 963281 - 963292 + g 81 -3 -5.74684 | opp_overlap 963265 AAAACAATAATGTTT TCTA CAAG TAGA TTTTTATTTTTATTA P9301_11501 964207 - 963338 - | putative pfkB family carbohydrate kinase P9301_11511 964249 - 964620 + | hypothetical protein P9301_11521 965846 - 964617 - | major facilitator superfamily multidrug-efflux transporter TERM 629 966798 - 966812 + G 72 -5.7 -4.52589 | TGGGGCATTCACTTG GTGCT TTAAT AGCAC TTTTATATGAAGGCA TERM 630 967225 - 967243 + G 83 -10.4 -3.16055 | opp_overlap 967220 AATAAGTGAATCTTT TATTGGCT CAG AGCCAATA TTAGTACAAGATTTA TERM 631 967340 - 967327 - g 71 -5.3 -4.68424 | TAATGTAGTTAAAAA CCAAA ATGA TTTGG GACTTGACTTCCATC P9301_11531 965849 - 967396 + | putative dienelactone hydrolase dppB 968415 - 967393 - | putative ABC transporter, oligopeptides ddpA 969979 - 968408 - | ABC transporter substrate-binding protein P9301_11561 970269 - 969997 - | hypothetical protein thrA 971620 - 970319 - | homoserine dehydrogenase P9301_11581 972085 - 971666 - | hypothetical protein P9301_11591 972680 - 972123 - | 5-formyltetrahydrofolate cyclo-ligase ruvC 973163 - 972690 - | crossover junction endodeoxyribonuclease RuvC chlI 974257 - 973169 - | protoporphyrin IX magnesium chelatase subunit ChlI lasT 975127 - 974375 - | tRNA/rRNA methyltransferase P9301_11631 975426 - 975124 - | cytochrome cM petG 975566 - 975685 + | cytochrome b6-f complex subunit PetG P9301_11651 976261 - 975662 - | N6-adenine-specific methylase hisH 976892 - 976275 - | imidazole glycerol phosphate synthase subunit HisH P9301_11671 977227 - 976904 - | thioredoxin TERM 632 977342 - 977327 - R 100 -10.4 -5.54264 | opp_overlap 977326 977325 AAATATCTAAAAAAA GCCCGA TTAA TCGGGC GATTTAGTGTGTGAG TERM 633 977363 - 977376 + r 71 -8.1 -2.98493 | overlap 977361 AGTGTGTGAGGAGTA TGGGG TTTC CCCCA TCATTTAATAATAAC guaB 978625 - 977462 - | inositol-5-monophosphate dehydrogenase TERM 634 978127 - 978141 + g 74 -8.6 -3.33696 | CCATTCCAAGATGTT CAGTTG AAA CAACTG TTCCTTGAAGAAAAA P9301_11691 978806 - 981403 + | DNA gyrase subunit A TERM 635 981675 - 981665 - g 79 -2.4 -5.79595 | GGGGAAAATAAAAAA GGGG ATA CTCC GACAAAGCATAACTA TERM 636 982145 - 982131 - g 72 -2.8 -5.51165 | overlap 982133 AAAATCTTAAAAAAA GACTTT ATA AAAGAC TTAAGAGCAAAGGTA P9301_11701 981428 - 982639 + | putative lycopene beta cyclase P9301_11711 984228 - 982645 - | hypothetical protein TERM 637 983252 - 983271 + g 72 -4.9 -4.91473 | opp_overlap 983252 CTCGCGAGAAGATAG GCGTCAG CATGTT CTGCCGC TTTATTTTTGGCTTC TERM 638 984377 - 984387 + H 75 -4 -5.53288 | opp_overlap 984377 TATTTAAGTTATAAA TTTG CAG CAAA TTTTTTTAAATTAAA leuA 984455 - 986095 + | 2-isopropylmalate synthase P9301_11731 986178 - 986570 + | adenoviral fiber protein P9301_11741 988050 - 986578 - | HD superfamily hydrolase TERM 639 988424 - 988398 - g 82 -10.2 -3.33395 | overlap 988396 988394 TTAGACAAGAATATA GATGGAATGTTG CTA CAACTTCCCATC CCAAAGAAGTTTGAT folD 988125 - 989021 + | putative bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase TERM 640 989251 - 989265 + G 71 -7.8 -3.40163 | overlap 989251 CTTGCTCACTGGCTG GAGGGG AGC CCTCTC TTGCTGTTCCTACTG TERM 641 989251 - 989263 + G 77 -9.1 -3.26531 | overlap 989251 CTTGCTCACTGGCTG GAGGG GAG CCCTC TCTTGCTGTTCCTAC ispA 989058 - 989957 + | polyprenyl synthetase P9301_11771 990097 - 990450 + | hypothetical protein cobB 991838 - 990459 - | putative cobyrinic acid a,c-diamide synthase TERM 642 990932 - 990944 + gF 76 -6.3 -4.56597 | TTTTAGAGTTACTTA TATGC TCA GCATA TTTTTCAGGGAACCC P9301_11791 991732 - 991845 + | hypothetical protein P9301_11801 993143 - 991842 - | putative glucose 6-phosphate dehydrogenase effector OpcA zwf 994669 - 993146 - | glucose-6-phosphate 1-dehydrogenase petH 995744 - 994779 - | ferredoxin-NADP oxidoreductase (FNR) TERM 643 996593 - 996567 - g 79 -7.4 -4.38154 | opp_overlap 996566 996567 AGATCTTTCAGAAAA TTTGCTTGCC GTTGATA AGCAAGCAAA ATTATCAATAAATTA P9301_11831 996073 - 996609 + | hypothetical protein P9301_11841 997858 - 996740 - | adaptive-response sensory kinase TERM 644 996914 - 996896 - G 75 -8.2 -3.62864 | opp_overlap 996904 TAAACCTATGCCAAA TCCTGAAG TTC CTTCAGAA GTCTGCGGGAGTCTT TERM 645 998170 - 998160 - g 71 -6.8 -4.13995 | GCTCTAGAAAGTAAA TCCC AAT GGGA GTCGCATTATAAGTT P9301_11851 997965 - 998504 + | hypothetical protein TERM 646 998964 - 998952 - g 82 -4.9 -5.36314 | overlap 998955 998962 GAAAAGATTAAAAAA CAATT CAA AATTG AAACTGAGAGACTCA P9301_11861 998649 - 999008 + | Villin headpiece domain-containing protein prsA 1000010 - 999015 - | ribose-phosphate pyrophosphokinase TERM 647 999224 - 999208 - G 74 -8.7 -3.24076 | overlap 999206 GGAGGAGAGAATACA GCATGCG ATG CACATGC AAATATTCTATTAGC malQ 1000258 - 1001781 + | putative 4-alpha-glucanotransferase P9301_11891 1002289 - 1001795 - | helix-turn-helix P9301_11901 1004062 - 1002407 - | kinase cad 1004127 - 1005524 + | Orn/Lys/Arg decarboxylase family protein cdsA 1005534 - 1006391 + | phosphatidate cytidylyltransferase todF 1007303 - 1006404 - | Alpha/beta hydrolase fold gldA 1008403 - 1007312 - | putative glycerol dehydrogenase clpC 1010944 - 1008419 - | ClpC P9301_11961 1011565 - 1011119 - | putative ribosomal-protein-alanine acetyltransferase lysA 1011653 - 1013026 + | diaminopimelate decarboxylase P9301_11981 1013055 - 1013963 + | hypothetical protein uppS 1013967 - 1014770 + | undecaprenyl pyrophosphate synthetase bioB 1014839 - 1015783 + | biotin synthase P9301_12011 1015780 - 1016712 + | sulfurtransferase P9301_12021 1016724 - 1017224 + | hypothetical protein P9301_12031 1018120 - 1017221 - | lipoyl synthase recR 1018723 - 1018124 - | RecR protein psbP 1018827 - 1019384 + | photosystem II oxygen evolving complex protein PsbP P9301_12061 1021171 - 1019399 - | multidrug ABC transporter P9301_12071 1021476 - 1021183 - | hypothetical protein srmB 1023267 - 1021486 - | putative ATP-dependent RNA helicase TERM 648 1022046 - 1022070 + g 88 -7.3 -5.1167 | overlap 1022048 1022062 1022064 TCTTGGTTCTTGTTG AATTTTCTAAG TTT CTTAGAAAATG TTTTTCTCTTAGATT TERM 649 1022048 - 1022068 + g 93 -9.9 -4.17211 | overlap 1022046 1022062 1022064 TTGGTTCTTGTTGAA TTTTCTAAG TTT CTTAGAAAA TGTTTTTCTCTTAGA TERM 650 1023151 - 1023161 + g 74 -4 -5.22768 | overlap 1023153 AGATACTTCCAATAG TTGA GAT TCAA TTTCTTTTTTGTTAT TERM 651 1023153 - 1023165 + g 75 -2.7 -5.60689 | overlap 1023151 ATACTTCCAATAGTT GAGAT TCA ATTTC TTTTTTGTTATCTAA recD 1025109 - 1023406 - | exodeoxyribonuclease V 67 kD polypeptide recB 1028737 - 1025111 - | UvrD/REP helicase subunit B TERM 652 1026156 - 1026166 + g 74 -4 -5.2894 | TTGGTTCGGAACTTC GAAA AAA TTTC TTTTATTTTCTCTTT TERM 653 1027020 - 1027033 + g 82 -2.5 -6.09133 | ATTTTGCATGGGAGG TTAAA CTGA TTTAA TTTTTTTTTAAAATC P9301_12111 1029223 - 1028750 - | S-isoprenylcysteine methyltransferase-like protein recC 1032409 - 1029227 - | exodeoxyribonuclease V subunit C 125 kD polypeptide TERM 654 1029783 - 1029795 + g 77 -9.1 -3.23638 | opp_overlap 1029781 TGTTGACTCAAACTT GCAGC TAG GCTGC TTAATAAGTCTTTGA TERM 655 1030400 - 1030412 + g 79 -4.9 -5.18357 | opp_overlap 1030391 AACAGATGGATCACC CAAAT GAT ATTTG TTTTTTAATAAATTA P9301_12131 1032744 - 1032427 - | hypothetical protein pdxJ 1033724 - 1032753 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 656 1033960 - 1033939 - gH 80 -5.9 -4.9792 | opp_overlap 1033955 GATCTTATAGAAAAA GGAGAACAA CTAG TTGTTTTCC CCGAAGGAAAGATTA P9301_12151 1033630 - 1034244 + | phospholipid and glycerol acyltransferase TERM 657 1034522 - 1034536 + G 74 -4.2 -5.2291 | opp_overlap 1034519, overlap 1034519 CGCTAGAAAATTGGC GAAGCA ACT TGCCTC TTTTTATTCTGATCT P9301_12161 1034289 - 1034804 + | hypothetical protein P9301_12171 1034815 - 1035045 + | BolA-like protein P9301_12181 1035049 - 1035372 + | glutaredoxin-like protein P9301_12191 1035689 - 1035420 - | hypothetical protein P9301_12201 1035776 - 1036513 + | two-component response regulator P9301_12211 1037016 - 1036510 - | hypothetical protein crtH 1038576 - 1037032 - | putative carotenoid isomerase gid 1040012 - 1038600 - | tRNA (uracil-5-)-methyltransferase Gid pbsY 1040147 - 1040019 - | photosystem II protein Y TERM 658 1040241 - 1040260 + H 76 -2.2 -5.86332 | TGTTTTTCTATTGTT CAACTT GAGATAAA AAGTTG TTTTTTTTACCTTAA P9301_12251 1040897 - 1041004 + | hypothetical protein TERM 659 1041031 - 1041060 + T 79 -7.2 -4.70383 | gap 1 TTTTAAGTAATTACC GTGAGAGCTCCTG AACTA CAGGT-CTCTCAC TCTTTTTTTTTCAAT TERM 660 1041523 - 1041541 + T 100 -10.3 -4.41353 | opp_overlap 1041523 AAAAAAAAAAAAAAA GACCTGC TATAT GCAGGTC TTTTAATGTGTGTAA TERM 661 1041541 - 1041523 - T 100 -10.3 -7.14698 | opp_overlap 1041523 AAAAAAAAAAAAAAA GACCTGC TATAT GCAGGTC TTTTAATGTGTGTAA P9301_12261 1042778 - 1041579 - | porin TERM 662 1042894 - 1042876 - R 100 -10.3 -5.95539 | opp_overlap 1042876 GTCTAAATAAAAAAA GACCTGC TACAT GCAGGTC TTTTAATGTGTGTAA TERM 663 1042876 - 1042894 + r 100 -10.3 -4.41353 | opp_overlap 1042876 GTCTAAATAAAAAAA GACCTGC TACAT GCAGGTC TTTTAATGTGTGTAA P9301_12271 1044089 - 1042932 - | porin P9301_12281 1044479 - 1044312 - | hypothetical protein P9301_12291 1044695 - 1044799 + | hypothetical protein P9301_12301 1044863 - 1045423 + | hypothetical protein TERM 664 1045797 - 1045814 + T 93 -7 -5.74288 | opp_overlap 1045797 AACCAAGTCATACTA GCGAGT CTCCCA ACTCGC TTTTTTATTATTTGT TERM 665 1045975 - 1045956 - T 70 -8 -3.44553 | CCAAAAATTTTAGAA CACTTATT AATC AATAAGTG CGACCCATGAAAAGG hupE 1046666 - 1045962 - | putative hydrogenase accessory protein P9301_12321 1046745 - 1046608 - | hypothetical protein P9301_12331 1047453 - 1047554 + | hypothetical protein P9301_12341 1047641 - 1047853 + | hypothetical protein arsR 1048144 - 1047872 - | ArsR family regulatory protein TERM 666 1049221 - 1049205 - g 70 -8.1 -3.11291 | opp_overlap 1049199 1049203 1049200 1049218 TCTAGAAGTTCAATA GTTGATA GTT TATCAAC GATGGTTGTTAATTC gap3 1048311 - 1049333 + | putative glyceraldehyde 3-phosphate dehydrogenase P9301_12371 1049345 - 1050604 + | major facilitator superfamily multidrug-efflux transporter TERM 667 1051308 - 1051324 + G 95 -4.5 -6.25741 | opp_overlap 1051310, overlap 1051310 ACTCAAAGTTTTTAA TAGATTA TCT TAATCTG TTTTTTTTCTTCTTT chrA 1050635 - 1051861 + | chromate transporter TERM 668 1051885 - 1051867 - T 88 -6.7 -5.60993 | opp_overlap 1051867 GTTTGCATAAAAAAA GGAGGAA ATAAA TTCCCCC TTTTAAATATTTGTC P9301_12391 1052903 - 1051908 - | ABC transporter, substrate binding protein, phosphate TERM 669 1053784 - 1053814 + G 72 -9.2 -2.6834 | opp_overlap 1053783 1053780 1053784, overlap 1053783 TGCAATAAAAACTAG TTTTACTGGTGATG ATT CATTAACAGTAAAA ATTGATTCTGGTAAT TERM 670 1053895 - 1053875 - g 71 -8.3 -3.27158 | opp_overlap 1053873, overlap 1053873 1053871 1053877 GACCTTAACAATACA GACGACTTT CTT AAAGTCGAC GGTGTTGCATACAAA TERM 671 1053893 - 1053877 - g 78 -9.5 -3.19509 | opp_overlap 1053873, overlap 1053875 1053873 1053871 CCTTAACAATACAGA CGACTTT CTT AAAGTCG ACGGTGTTGCATACA P9301_12401 1053245 - 1054594 + | porin TERM 672 1054613 - 1054589 - T 95 -10.3 -3.83768 | opp_overlap 1054588 1054596 AAAACAACATTTAAA TTCTAAATTAA AGT TTAATTTAGAA ATCTTACACACATTA TERM 673 1054651 - 1054633 - T 78 -6.7 -4.86133 | opp_overlap 1054633 TACACACATTAAAAA GACCTGC TAAAT ACAGGTC TTTTTTTTTACCTTT TERM 674 1054633 - 1054651 + T 100 -6 -6.17292 | opp_overlap 1054633 TACACACATTAAAAA GACCTG CTAAATA CAGGTC TTTTTTTTTACCTTT phoR 1055844 - 1054684 - | two-component sensor histidine kinase, phosphate sensing TERM 675 1055667 - 1055641 - GT 78 -8.9 -3.4072 | TAGGTCTGATGATAA GATTATCCATC CTTGT GATGAATAATC CAACCAAGACAACAT P9301_12421 1055860 - 1055747 - | hypothetical protein phoB 1056569 - 1055841 - | two-component response regulator, phosphate P9301_12441 1056953 - 1056786 - | hypothetical protein P9301_12451 1057452 - 1057051 - | myosin N-terminal SH3-like domain-containing protein P9301_12461 1057822 - 1058010 + | poly A polymerase regulatory subunit TERM 676 1058324 - 1058309 - g 72 -4.7 -4.8622 | CTTGGCAACTAAAAA TGGAG AAGTTA CTCCA TATAGAAGATCAGTC P9301_12471 1058229 - 1058399 + | hypothetical protein P9301_12481 1058664 - 1058416 - | hypothetical protein TERM 677 1058563 - 1058575 + g 70 -6.3 -4.20932 | TTCTCTCTGCCTTTG GGTTT CAG AAACC TTTTGAGTACCTATT P9301_12491 1058973 - 1058668 - | hypothetical protein phnC 1059372 - 1060157 + | hypothetical protein P9301_12511 1060190 - 1061068 + | hypothetical protein TERM 678 1061246 - 1061279 + G 74 -7.6 -3.83102 | gap 1, overlap 1061248 AAGGATAAGTACAGG CATT-CCGGCAGT TTTAAAATT ACTGCCGGAAATG TTTCCTCCTGATTTC TERM 679 1061248 - 1061276 + G 80 -10.4 -2.68761 | overlap 1061246 GGATAAGTACAGGCA TTCCGGCAGT TTTAAAATT ACTGCCGGAA ATGTTTCCTCCTGAT TERM 680 1061350 - 1061367 + G 78 -2 -5.88197 | overlap 1061347 TGGCAATGAGTATCG CAGGAA CTTCGA TTTCTG TTTTTTTATCTTTAC P9301_12521 1061106 - 1061903 + | hypothetical protein TERM 681 1062407 - 1062421 + G 90 -5.8 -5.59534 | opp_overlap 1062401 1062406 1062407, overlap 1062416 CTAGGAAGATTAAAG GTTTTA ATG TAAAAC TTTTTTATTATGATT P9301_12531 1061914 - 1062870 + | putative dehydrogenase P9301_12541 1063276 - 1062851 - | hypothetical protein P9301_12551 1063361 - 1064086 + | hypothetical protein P9301_12561 1064083 - 1064688 + | hypothetical protein P9301_12571 1065079 - 1064678 - | hypothetical protein P9301_12581 1065179 - 1066189 + | arsenite efflux pump ACR3 and related permease TERM 682 1066411 - 1066396 - f 70 -6.2 -4.20042 | opp_overlap 1066395 AGGAACAGGGTAAAA TTTCTC TAGT GAGAAA AATTTGAAAGTAAAA TERM 683 1069621 - 1069646 + G 100 -11.9 -4.13767 | overlap 1069616 GTATACATGATTTTC GGCTCTGCGAA GATT TTGGCAGAGCC TTTTAAAATCAAAAA P9301_12591 1066441 - 1070085 + | hypothetical protein TERM 684 1070305 - 1070323 + F 100 -9.6 -5.88476 | opp_overlap 1070305 AACCAATTCATACTA GCGAGTTA CCC TGACTCGC TTTTTTATTTATTTT P9301_12601 1070474 - 1070779 + | hypothetical protein P9301_12611 1070842 - 1071057 + | hypothetical protein P9301_12621 1072776 - 1071397 - | hypothetical protein TERM 685 1073518 - 1073485 - g 88 -9.1 -4.15508 | opp_overlap 1073496, overlap 1073472 1073476 1073496 AAGGAATTTTGAAAA TATCCCAAAAATCAA TAAG TTGATGTTTGAGATA GCTAATTGTGTTAAT P9301_12631 1073300 - 1073929 + | hypothetical protein TERM 686 1074485 - 1074501 + F 100 -6.6 -6.01187 | ACCAATTCATACTGG CGAGTT ACCCA AACTCG TTTTTTTATTTCATT P9301_12641 1074635 - 1075249 + | hypothetical protein sdhA 1077309 - 1075597 - | succinate dehydrogenase/fumarate reductase, flavoprotein subunit TERM 687 1077753 - 1077773 + G 71 -6.9 -3.9693 | overlap 1077735 ATGATAGGTTTCATG GCTGTCATT ATT AATTACAGC TTATTTGGATGGATA P9301_12661 1077552 - 1077806 + | hypothetical protein P9301_12671 1077807 - 1078034 + | hypothetical protein rsuA 1079205 - 1078483 - | pseudouridine synthase, Rsu TERM 688 1079300 - 1079312 + r 70 -2.7 -5.58074 | GTTAGAATTCTCATT TTTGA ATT TCAGA TTTTTTTCATGATTA P9301_12691 1079602 - 1079357 - | hypothetical protein P9301_12701 1080273 - 1079635 - | hypothetical protein TERM 689 1080503 - 1080529 + G 83 -9.5 -3.80573 | TTGTTACTGGGACTT GGAGGAGTTTA TGTAT TAATCTCCTCC TTTCATGATGATGAC P9301_12711 1080461 - 1080607 + | hypothetical protein P9301_12721 1080857 - 1081042 + | hypothetical protein P9301_12731 1081050 - 1081214 + | hypothetical protein P9301_12741 1081452 - 1081285 - | chorismate binding enzyme P9301_12751 1081824 - 1081513 - | hypothetical protein TERM 690 1081951 - 1081938 - H 95 -4.5 -6.50278 | AAAGCAAAAAAAAAA GACTC TTTC GAGCC TAGGTGATGGGGACT TERM 691 1082096 - 1082112 + H 88 -6.5 -5.60993 | CCCGCTTTTTGATTA GGGCG AAGCTAA CGCCC TTTTTTTATGGAAAA P9301_12761 1082238 - 1082339 + | hypothetical protein P9301_12771 1082419 - 1082619 + | hypothetical protein P9301_12781 1082650 - 1082766 + | hypothetical protein TERM 692 1082946 - 1082958 + F 70 -3.5 -5.32944 | opp_overlap 1082946 CAATGACTAAAGTTA TTTTT TCA AAAAA TTTTTTAATTATGGA P9301_12791 1083307 - 1083459 + | hypothetical protein P9301_12801 1083459 - 1083575 + | hypothetical protein P9301_12811 1083572 - 1083802 + | hypothetical protein P9301_12821 1083805 - 1084257 + | hypothetical protein P9301_12831 1084321 - 1084839 + | metal-binding protein TERM 693 1084884 - 1084894 + F 73 -2.6 -5.64006 | TTTTCTTAGAAATTT TAAA TTT TTTA TTTTTTTACTTACCT P9301_12841 1084945 - 1085082 + | gibberellin regulated protein-like protein P9301_12851 1085083 - 1085343 + | fumarate reductase subunit D P9301_12861 1085569 - 1085372 - | hypothetical protein P9301_12871 1085897 - 1085676 - | hypothetical protein P9301_12881 1086266 - 1085976 - | hypothetical protein TERM 694 1086431 - 1086413 - R 100 -8.1 -6.23317 | opp_overlap 1086413 ATAAAAATAAAAAAA GAGAGGG ATCAA CCCCCTC TTAATTGATCAGTTT P9301_12891 1086628 - 1086458 - | hypothetical protein P9301_12901 1087093 - 1086818 - | hypothetical protein P9301_12911 1087319 - 1087450 + | hypothetical protein P9301_12921 1087594 - 1087460 - | hypothetical protein P9301_12931 1088015 - 1087773 - | hypothetical protein P9301_12941 1088221 - 1087991 - | hypothetical protein P9301_12951 1088373 - 1088498 + | hypothetical protein mntH 1090027 - 1088723 - | Mn2+/Fe2+ transporter P9301_12971 1090160 - 1090044 - | hypothetical protein P9301_12981 1090304 - 1090188 - | hypothetical protein P9301_12991 1090764 - 1090390 - | hypothetical protein P9301_13001 1091126 - 1090827 - | hypothetical protein TERM 695 1091119 - 1091136 + g 72 -2.8 -5.40072 | TCAATTAAAAGTTGG TAATTC ATTAAA GAATTA TTTTTTTAAGAAACC P9301_13011 1091423 - 1091142 - | hypothetical protein TERM 696 1091777 - 1091793 + G 82 -10.9 -2.62983 | opp_overlap 1091771 1091775, overlap 1091771 GGGAGAAACGCAATG GCAAGCA CAT TGCTTGC TCCTGTAAAGCTGGC P9301_13021 1091558 - 1092901 + | SNF family Na(+)-dependent transporter TERM 697 1093011 - 1092995 - f 78 -6.7 -4.83615 | CATCCCTGATAAAAA GATATAT AAG ATATATC TAGATGTTGAATTTA TERM 698 1093384 - 1093403 + G 71 -7.9 -3.46913 | AATTATCCAATGAGT CCTGTTG GTTGGG CAACAGG TTATGCATTATCTAT TERM 699 1093988 - 1094006 + G 70 -7.4 -3.62046 | TGATATCACTTATAG CCAACTGG ATG CGAGTTGG TTATTGCCAGGGTAA P9301_13031 1093066 - 1094769 + | hypothetical protein P9301_13041 1095234 - 1094812 - | hypothetical protein P9301_13051 1095448 - 1095287 - | hypothetical protein P9301_13061 1095704 - 1095522 - | hypothetical protein P9301_13071 1095854 - 1096123 + | phosphatidylinositol-specific phospholipase P9301_13081 1096245 - 1096541 + | heat-labile enterotoxin alpha chain P9301_13091 1096538 - 1097275 + | hypothetical protein TERM 700 1097316 - 1097301 - T 100 -9 -5.18357 | TAATCCAGTAAAAAA GGGCTT GATA AAGCCC TCAAAAAATTTAAAA P9301_13101 1097470 - 1097342 - | high light inducible protein P9301_13111 1098906 - 1097605 - | hypothetical protein P9301_13121 1099073 - 1099555 + | hypothetical protein P9301_13131 1099574 - 1100566 + | amidohydrolase P9301_13141 1100559 - 1101647 + | hypothetical protein TERM 701 1101882 - 1101862 - g 84 -3.4 -5.88471 | opp_overlap 1101862, overlap 1101876 GATTACGAAAAAAAA TATTTTGC GAGGA ACAAAATA TTTTTGCTGAATCAG P9301_13151 1101654 - 1102307 + | hypothetical protein P9301_13161 1102301 - 1103281 + | hypothetical protein TERM 702 1103382 - 1103367 - g 74 -6.2 -4.43877 | TAATTTTCAAATAAA TTTACC TGAC GGTAAA AAAGTATCTCTATAT P9301_13171 1103341 - 1103616 + | hypothetical protein P9301_13181 1103809 - 1104120 + | hypothetical protein P9301_13191 1104120 - 1104380 + | high light inducible protein P9301_13201 1104416 - 1104544 + | high light inducible protein P9301_13211 1104546 - 1104725 + | hypothetical protein TERM 703 1104749 - 1104778 + T 100 -10.9 -5.24129 | AAATGATCGTCATGA GTGTTTGTCAATA GGGA TACTGACAAACAC TTTTTTATGAGAAAA TERM 704 1104840 - 1104812 - T 100 -9.8 -6.07627 | opp_overlap 1104812 ATTTGTAAAAAAAAA GAGATTGTTTCT TAGCT AAAAACAATCTC TCAATTACCTAATTC P9301_13221 1105150 - 1104935 - | hypothetical protein P9301_13231 1105461 - 1105210 - | hypothetical protein P9301_13241 1105799 - 1105515 - | cytochrome b(C-terminal)/b6/petD P9301_13251 1105955 - 1106098 + | hypothetical protein P9301_13261 1106098 - 1106256 + | hypothetical protein TERM 705 1106267 - 1106244 - T 93 -9 -4.78661 | ATTCAAAAAGCAAAA TAGTAAGCCT TAAG AGACTTACTA AACGTTAAATAAGAA P9301_13271 1107356 - 1106265 - | translation-associated GTPase TERM 706 1108173 - 1108192 + G 74 -8.6 -3.35679 | opp_overlap 1108173 1108186 AAAATAGGTCAAGAA GCCTCAGT AAGG ATTGAGGC TTATCCCTCAAAAAA TERM 707 1108398 - 1108366 - g 85 -4.9 -5.5604 | overlap 1108368 GTAATGAAGAAAAAA TCTTAGTGCCAACAG TTT CTATTGTCACTGAAA AAGGTGAAAAGGGAA acrA 1107501 - 1108562 + | membrane fusion protein TERM 708 1111067 - 1111049 - g 80 -9 -3.68853 | overlap 1111033 1111029 TCAAAAATTTTCAAA TTTCTTGA ACT TCAAGAAA GGCTTGCCTTATCAA polA 1108559 - 1111489 + | DNA polymerase I TERM 709 1112063 - 1112045 - g 72 -2.4 -5.36314 | overlap 1112035 1112052 1112059 GAAAATAGTAAAAAA CTAAATCC GCA AGATTTTG CACTATGGAAAAAAG cysS 1111514 - 1112983 + | cysteinyl-tRNA synthetase dxr 1113081 - 1114295 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase P9301_13321 1114664 - 1114437 - | hypothetical protein TERM 710 1114730 - 1114753 + H 78 -6.1 -5.05782 | overlap 1114731 GAATATACATTGTAG TTTCTTCAC CTTTTA GTGAAGAAG TTTTTTGCAGTAGCT P9301_13331 1114821 - 1115171 + | ferredoxin P9301_13341 1116246 - 1115158 - | putative hydrolase of the alpha/beta-hydrolase fold pntB 1117666 - 1116227 - | putative nicotinamide nucleotide transhydrogenase, subunit beta pntA-2 1117968 - 1117675 - | putative nicotinamide nucleotide transhydrogenase, subunit alpha 2 (A2) pntA 1119111 - 1117981 - | putative nicotinamide nucleotide transhydrogenase, subunit alpha 1 (A1) TERM 711 1118101 - 1118065 - G 84 -11.2 -3.05463 | opp_overlap 1118064, overlap 1118070 ATCCTCTTTATCTAA TTTAATTACACCATCT TTTAT AAATGGTGTAATCAAA GATGTTAAGTTCTTA TERM 712 1118096 - 1118070 - G 77 -8.9 -3.19192 | opp_overlap 1118064, overlap 1118065 CTTTATCTAATTTAA TTACACCATCT TTTAT AAATGGTGTAA TCAAAGATGTTAAGT TERM 713 1119720 - 1119683 - g 100 -6.6 -6.10295 | gap 1, opp_overlap 1119690 TTAAGAGAAAAAAAA GAAACT-CTTTTGAAGA AAATA TCTTCAAAATTAGTTTC AGAGGAAAAAGTTAG TERM 714 1119690 - 1119712 + G 71 -7.9 -3.51232 | opp_overlap 1119683 AAAAAAAAGAAACTC TTTTGAAGA AAATA TCTTCAAAA TTAGTTTCAGAGGAA P9301_13381 1119239 - 1119817 + | EF-1 guanine nucleotide exchange doma P9301_13391 1119972 - 1120196 + | hypothetical protein P9301_13401 1120275 - 1121651 + | putative thioredoxin reductase infA 1121927 - 1121661 - | translation initiation factor IF-1 P9301_13421 1122259 - 1122020 - | hypothetical protein TERM 715 1122073 - 1122084 + g 73 -4.4 -5.04987 | opp_overlap 1122073 GACCATAATAAAAAT TTGC TTTA GCAA TTTTTTCAGAATCTT P9301_13431 1123251 - 1122289 - | putative chaperon-like protein for quinone binding in photosystem II petM 1123407 - 1123309 - | cytochrome b6-f complex subunit PetM P9301_13451 1123502 - 1124443 + | putative alpha/beta hydrolase superfamily protein ilvH 1124447 - 1124971 + | acetolactate synthase 3 regulatory subunit P9301_13471 1125573 - 1124968 - | cyclophilin-type peptidyl-prolyl cis-trans isomerase TERM 716 1125115 - 1125103 - G 71 -2 -5.38054 | TGTTACAAAGAAAAA TTCA GTTGA TGAA GACTTATTGTTAAAG P9301_13481 1126178 - 1125621 - | photosystem I assembly protein Ycf4 TERM 717 1125671 - 1125695 + g 70 -7.1 -3.76125 | TAGCCAGACGAGCCC CCTCCTCTTCA ACT TGAAGAAGTGG TTTGAGTTCACCTGC TERM 718 1125706 - 1125728 + g 84 -3.5 -5.9003 | gap 2, overlap 1125721 AGTGGTTTGAGTTCA CCTGCTCCGCT TAA AG-GGAG-AGG TTTTTTTCTTCCTTT psbD 1126362 - 1127438 + | photosystem II PsbD protein (D2) TERM 719 1127998 - 1128014 + G 76 -7.3 -4.21438 | AACCCAACTTTAGAT CCAAGAG TTA TTCTTGG TTATTTATTCAGATC TERM 720 1128588 - 1128610 + G 73 -7.8 -3.61398 | TCATGCTCCTAACGC TTCTATCAAC TCT GTTGGTGGAA TTATTACAGAGCCAA psbC 1127422 - 1128804 + | photosystem II PsbC protein (CP43) TERM 721 1128844 - 1128825 - T 87 -6.4 -5.27477 | opp_overlap 1128826, overlap 1128826 ATCTCAACTAAAAAA GCCCTATC TTTA GATAGGGT TTTTTTTTGCTCAAT TERM 722 1128826 - 1128843 + T 100 -9.9 -6.15828 | opp_overlap 1128825 1128826 TCTCAACTAAAAAAG CCCTATC TTTA GATAGGG TTTTTTTTTGCTCAA TERM 723 1128843 - 1128826 - T 90 -9.9 -3.75402 | opp_overlap 1128826, overlap 1128825 TCTCAACTAAAAAAG CCCTATC TTTA GATAGGG TTTTTTTTTGCTCAA maf 1129475 - 1128864 - | Maf-like protein TERM 724 1129173 - 1129205 + g 75 -8 -3.61103 | TCCAGACATTTTTTT CCATCTAATAAA TGCTTCCTC TTTATTAGATGG TTTCCCATAAGCTTC TERM 725 1130676 - 1130650 - g 74 -3.1 -5.45652 | ATTCTGAACAAAAAA TTAAAGGTATT GGATT ACTACCCTTAA AAACGACTTTCTTTA cobQ 1129542 - 1131071 + | cobyric acid synthase TERM 726 1131126 - 1131113 - g 71 -5.3 -4.56978 | TGGCCAAACAATAAA GAAAC CTTT GTTTC AGATGGTGATAACTG P9301_13531 1131068 - 1131322 + | hypothetical protein P9301_13541 1131877 - 1131329 - | hypothetical protein TERM 727 1132090 - 1132076 - R 95 -7.1 -5.93809 | opp_overlap 1132074 1132076 TTTGCATAAAAAAAA CCCCA AATAA TGGGG TCTTATGTAGCTTTA P9301_13551 1132568 - 1132374 - | hypothetical protein P9301_13561 1132641 - 1132766 + | hypothetical protein TERM 728 1132837 - 1132819 - T 75 -7.6 -4.01158 | AATCTGATCAAATAA TTAATCTA AAT TAGATTAA GAATAAAAAACACCC P9301_13571 1133431 - 1132829 - | hypothetical protein TERM 729 1132928 - 1132938 + g 76 -5.4 -5.10029 | overlap 1132921 ACCTATGAGGCATAT TGTC TTT GACA TTTTTTGAACTTCAT TERM 730 1133491 - 1133476 - R 77 -3.2 -5.80817 | opp_overlap 1133476 CTTAATAGAAAAAAA GAACCT GAAA AGGGTC TTTATTAATATCTTA P9301_13581 1133678 - 1133520 - | hypothetical protein P9301_13591 1134015 - 1134200 + | hypothetical protein P9301_13601 1134197 - 1134427 + | hypothetical protein afuA 1135849 - 1134827 - | putative iron ABC transporter, substrate binding protein TERM 731 1135026 - 1135037 + g 74 -3 -5.47159 | opp_overlap 1135026 AAGAATTCAAGCAAC TGAA TAGC TTCA TTTTTATTTGTTGCA TERM 732 1135819 - 1135840 + g 74 -5.3 -4.7657 | opp_overlap 1135819 ATGTACATGTGAATA CTGAAAAAA TTAT TTTTTTTAG TTTTTGCACTTTTTG TERM 733 1136379 - 1136369 - g 74 -4 -5.28561 | AACACAGAAGAAAAA TTCA AAT TGAA TCCTGGAGAGATAAT piuC 1135952 - 1136620 + | putative hydroxylase TERM 734 1136886 - 1136869 - g 76 -5.6 -5.06103 | ACAATGCTCAAAAAA TTGCTG ATGAGG CAGCAA AATCAAGTGCTTGTA P9301_13631 1136694 - 1136933 + | M20/M25/M40 family peptidase-like protein TERM 735 1136945 - 1136984 + T 100 -19.6 -2.57013 | opp_overlap 1136945 1136947 1136958, overlap 1136952 1136958 GTAAAAATTTAAAAA GTCAAAATAAAAACGCCC AACT GGGCGTTTTTATTTTGTC TAAATTAAATTAGAA TERM 736 1136984 - 1136945 - T 100 -19.6 -4.92239 | opp_overlap 1136945 1136952 1136958, overlap 1136947 1136958 GTAAAAATTTAAAAA GTCAAAATAAAAACGCCC AACT GGGCGTTTTTATTTTGTC TAAATTAAATTAGAA TERM 737 1136982 - 1136947 - T 100 -20.8 -2.70603 | opp_overlap 1136945 1136952 1136958, overlap 1136945 1136958 AAAAATTTAAAAAGT CAAAATAAAAACGCCC AACT GGGCGTTTTTATTTTG TCTAAATTAAATTAG TERM 738 1136952 - 1136977 + T 100 -14.9 -4.57474 | opp_overlap 1136947 1136945 1136958, overlap 1136945 1136958 TTTAAAAAGTCAAAA TAAAAACGCCC AACT GGGCGTTTTTA TTTTGTCTAAATTAA TERM 739 1136958 - 1136971 + T 100 -9.5 -5.58522 | opp_overlap 1136947 1136945 1136958, overlap 1136952 1136945 AAGTCAAAATAAAAA CGCCC AACT GGGCG TTTTTATTTTGTCTA TERM 740 1136971 - 1136958 - T 100 -9.5 -5.49568 | opp_overlap 1136958 1136952 1136945, overlap 1136947 1136945 AAGTCAAAATAAAAA CGCCC AACT GGGCG TTTTTATTTTGTCTA P9301_13641 1138292 - 1136994 - | porin-like protein glyQ 1139234 - 1138428 - | glycyl-tRNA synthetase subunit alpha TERM 741 1139038 - 1139051 + g 71 -6.7 -4.11412 | TATTTTTCCTGGATT CCTTC AGGC GAAGG TTTAATTATTACTTG P9301_13661 1139841 - 1139455 - | hypothetical protein P9301_13671 1140194 - 1139862 - | macrophage migration inhibitory factor family protein TERM 742 1139937 - 1139947 + g 78 -6.8 -4.50976 | ATAAATCCTATCTAT TGGG ATT CCCA TTTTCTCATATACAA P9301_13681 1140370 - 1140197 - | hypothetical protein TERM 743 1140785 - 1140775 - g 77 -4 -5.48303 | opp_overlap 1140775 AGAACTTGAAAAAAA CAAA ATT TTTG ATTCTTATTGGATAC P9301_13691 1140521 - 1141159 + | hypothetical protein P9301_13701 1141268 - 1141513 + | hypothetical protein P9301_13711 1142172 - 1141519 - | hypothetical protein TERM 744 1142231 - 1142212 - R 90 -4.3 -6.22802 | gap 1, opp_overlap 1142212, overlap 1142198 TTCTACAAAAAAAAA CCTC-CCT GTTTG AGGAGAGG TTTTTTTATTAGATT TERM 745 1142212 - 1142231 + r 86 -4.3 -5.83226 | gap 1, opp_overlap 1142212 1142198 TTCTACAAAAAAAAA CCTC-CCT GTTTG AGGAGAGG TTTTTTTATTAGATT P9301_13721 1143308 - 1142250 - | chlorophyll a/b binding light harvesting protein PcbD isiB 1143977 - 1143453 - | flavodoxin FldA P9301_13741 1144118 - 1144852 + | hypothetical protein P9301_13751 1145202 - 1145435 + | hypothetical protein TERM 746 1146179 - 1146195 + G 79 -6.7 -4.55759 | opp_overlap 1146170 1146176 AAGAAATAAAATTTT CAATTTT ATT AAAATTG TTTATTCTTCCTTTT P9301_13761 1145641 - 1146426 + | AEC family transporter P9301_13771 1146520 - 1146771 + | CopG family protein P9301_13781 1148573 - 1146768 - | glycosyltransferase TERM 747 1148538 - 1148548 + g 81 -3.2 -5.86332 | TAAAACTATCAGTAA GGTT ATA AGCC TTTTTTTTGAGTTAA P9301_13791 1149656 - 1148580 - | glycosyl transferases group 1 TERM 748 1149142 - 1149155 + g 77 -3.1 -5.64274 | AAATTAAACCCATTC CCAAT AATT GTTGG TTTTTTTATGAATGG TERM 749 1149699 - 1149677 - R 70 -4.9 -4.83615 | GACTTTTTACAAAAA GACACTAAT TAAAT AGTAGTGTC AGAAAACTTATTTTC P9301_13801 1150626 - 1149685 - | SMR family transporter PecM TERM 750 1150404 - 1150394 - G 87 -5.4 -5.63857 | opp_overlap 1150394 AAAAACTGAAAAAAA GTAG CAT CTAC TATCGTAAAGACAAA sppA 1150679 - 1151488 + | signal peptide peptidase SppA (protease IV) aroH 1151495 - 1151878 + | chorismate mutase TERM 751 1151980 - 1151995 + G 79 -4.8 -5.31275 | GAAATTTACTTTCAA TCTTAA AATT TTAAGA TTTTTTCTAATCCCC P9301_13831 1151948 - 1152526 + | hypothetical protein rpmH 1152557 - 1152694 + | 50S ribosomal protein L34 TERM 752 1152787 - 1152768 - g 78 -5.8 -4.89852 | TTACATTCATAAAAA TTCCATAA CATA TCATGGAA AATTAATGACATTTA rnpA 1152706 - 1153092 + | ribonuclease P protein component TERM 753 1153460 - 1153450 - g 71 -3.2 -5.15682 | AAAATATAAACAAAA GATC ACA GACC CCAAATCTCAAAGAA P9301_13861 1153089 - 1153502 + | hypothetical protein TERM 754 1153803 - 1153785 - g 70 -4.6 -4.81644 | GAAATAAAATCAAAA TTTTCAGG TGA CCCAAAAA AACAGCAAGAGGAGC yidC 1153575 - 1154717 + | putative inner membrane protein translocase component YidC P9301_13881 1154733 - 1156199 + | ATPase TERM 755 1157570 - 1157580 + G 70 -4 -5.02074 | GCTCTGGTTCCATAT TTTG GAT CAAA TTTTTTAAAAACTGC serS 1156322 - 1157599 + | seryl-tRNA synthetase TERM 756 1157782 - 1157794 + G 77 -7.7 -4.13872 | overlap 1157792 TTCATTCAGAGCCTT TCCTC TTG GAGGA TTTGTATCCTTCCCT P9301_13901 1157609 - 1158688 + | membrane-associated Zn-dependent proteases 1 rpsN 1158751 - 1159053 + | 30S ribosomal protein S14 TERM 757 1159486 - 1159474 - g 77 -9.1 -3.27475 | overlap 1159472 GGTTTCATGAGAAGA GAGGG CCG CCCTC CAGAAAGAGCAACTT P9301_13921 1159240 - 1161405 + | polynucleotide phosphorylase/polyadenylase cysQ 1162309 - 1161407 - | CysQ-like protein P9301_13941 1162313 - 1163179 + | putative tetrapyrrole methylase family protein TERM 758 1163203 - 1163219 + G 86 -3.8 -5.75945 | opp_overlap 1163191 1163203 AATTTAAAAAATGTA TCTTTT AATCA AAAAGA TTTTTTTTGCGGCGT P9301_13951 1163198 - 1163416 + | hypothetical protein P9301_13961 1164092 - 1163424 - | hypothetical protein TERM 759 1164738 - 1164722 - g 80 -9.5 -3.44552 | opp_overlap 1164722, overlap 1164720 ATTTCAGGAACAATA CCACTAA TAT TTAGTGG TTTTAGTCAATACTT TERM 760 1164722 - 1164738 + G 90 -9.5 -4.29396 | opp_overlap 1164720 1164722 ATTTCAGGAACAATA CCACTAA TAT TTAGTGG TTTTAGTCAATACTT TERM 761 1165448 - 1165438 - g 77 -4 -5.4505 | opp_overlap 1165431 1165438 TTTCTCAAGAAAAAA TTTC CTA GAAA ATTCTTCTCTTTTTG P9301_13971 1164332 - 1165600 + | hypothetical protein ugd 1167018 - 1165603 - | UDP-glucose 6-dehydrogenase TERM 762 1166259 - 1166237 - G 71 -8.5 -2.80699 | overlap 1166234 1166232 TCGGAACCAATAGCA GCAGAAACC TCTTT GATTTCTGC ACCAGTCTTTTCGCA TERM 763 1166519 - 1166532 + g 95 -3.9 -6.36459 | opp_overlap 1166519 GGACTTGATAATACA GAAAA AGAA TTTTC TTTTTTTTTGTTGGA P9301_13991 1168120 - 1167086 - | putative nucleotide sugar epimerase TERM 764 1167876 - 1167896 + g 87 -5.6 -5.58522 | overlap 1167868 TTTGGTCTATATTTT TCAAATAT ATTAA ATATTTGA TTTTTATTTTCTATA P9301_14001 1168305 - 1169255 + | nucleoside-diphosphate-sugar epimerase TERM 765 1169278 - 1169248 - f 87 -10 -3.35183 | opp_overlap 1169243 1169243, overlap 1169243 AACTAAACAAGTTAA GTATTTAATTGATT ATG AAACAATTAAATAC TGAAGCTTTAGAATC TERM 766 1169614 - 1169604 - g 74 -4 -5.20633 | AAAAATATAGAAAAA TTCT TGA AGAA CAGTAAAAAACATAA P9301_14011 1169256 - 1169906 + | hypothetical protein P9301_14021 1169916 - 1170707 + | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 767 1170823 - 1170811 - gf 74 -6.3 -4.38774 | AAGAGTATATGAAAA TGCAT TAA ATGCA AAATTAATAGATACT kdsB 1170704 - 1171447 + | CMP-2-keto-3-deoxyoctulosonic acid synthetase TERM 768 1171724 - 1171706 - gT 76 -6.2 -4.56775 | AGTTTTTCCTAAAAA TATAAATA GAC TATTTATA ACCTATGGAGATTAT TERM 769 1171954 - 1171964 + GT 74 -4 -5.18561 | opp_overlap 1171954, overlap 1171940 ATGCTTTTTTGAAGA GTAA TTT TTAC TTTTTTACGTATTTA TERM 770 1172891 - 1172877 - gT 78 -5.8 -4.7871 | opp_overlap 1172876 1172877 1172879 AAGTATTATGAAAAA TATTTC AAG GAAATA AATTTTTCTAAATTT P9301_14041 1171398 - 1172933 + | hypothetical protein P9301_14051 1174000 - 1172930 - | nucleoside-diphosphate-sugar pyrophosphorylase P9301_14061 1174221 - 1174003 - | hypothetical protein P9301_14071 1175336 - 1174224 - | UDP-N-acetylglucosamine 2-epimerase spsE 1176351 - 1175326 - | sialic acid synthase P9301_14091 1176929 - 1176336 - | hypothetical protein P9301_14101 1178125 - 1176929 - | pyridoxal phosphate-dependent enzyme rfbB 1179129 - 1178122 - | nucleoside-diphosphate-sugar epimerase TERM 771 1178351 - 1178391 + g 74 -8.5 -3.21466 | opp_overlap 1178358, overlap 1178353 1178358 TTAGAGTTCATTATT TTTGAAATTTCTTTAACTG TAT CAGCTATAGAAATTTCATA TTCGCTTGCTGCATT TERM 772 1178353 - 1178389 + g 84 -11.1 -3.16676 | opp_overlap 1178358, overlap 1178351 1178358 AGAGTTCATTATTTT TGAAATTTCTTTAACTG TAT CAGCTATAGAAATTTCA TATTCGCTTGCTGCA P9301_14121 1179884 - 1179126 - | flagellin modification protein A P9301_14131 1180574 - 1179891 - | CMP-N-acetylneuraminic acid synthetase P9301_14141 1181539 - 1180571 - | hypothetical protein galE 1182595 - 1181603 - | UDP-glucose 4-epimerase P9301_14161 1183515 - 1182571 - | hypothetical protein P9301_14171 1183596 - 1184501 + | hypothetical protein TERM 773 1184758 - 1184772 + G 80 -5.8 -5.02715 | TCACAAATTAAACCT TGATAA AAG TTATCA TTTTTCATTTCCTCT P9301_14181 1184498 - 1185379 + | hypothetical protein TERM 774 1185931 - 1185903 - g 86 -4 -5.80727 | overlap 1185906 AAAAACAACAAAAAA CATTACTAAAAA CAATC TTTCTAGTATTG AAATTAAACTTCCAA P9301_14191 1185388 - 1186458 + | hypothetical protein P9301_14201 1187415 - 1186465 - | hypothetical protein P9301_14211 1188071 - 1187412 - | hypothetical protein TERM 775 1188270 - 1188282 + r 83 -3.5 -6.06723 | AAATGAATTATTTAT TTAAA CTG TTTAA TTTTTTTTTAGAACA P9301_14221 1189061 - 1188279 - | hypothetical protein P9301_14231 1191252 - 1189492 - | hypothetical protein TERM 776 1189932 - 1189914 - G 74 -3.8 -5.15167 | CATCAGCAAGAAAAA TCTCCTGC GGA ACATGAGA AATTATATTTTGCCA galE 1191331 - 1192389 + | UDP-glucose 4-epimerase P9301_14251 1193574 - 1192420 - | hypothetical protein TERM 777 1193222 - 1193207 - G 75 -2.6 -5.52986 | overlap 1193211 ATTTTATTAAAAAAA TTCATA TTTT CATGAA AATAATAACCATGAA TERM 778 1193407 - 1193391 - G 74 -3.1 -5.36018 | overlap 1193377 1193392 ATGAAAAAAAAGAAA TTTTTCT TTC AAAAAAA ATATTTTTAAATTTG P9301_14261 1194464 - 1193571 - | hypothetical protein rfe 1194598 - 1195554 + | UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase P9301_14281 1195591 - 1197480 + | nucleotide-diphosphate-sugar epimerase, membrane associated TERM 779 1197718 - 1197744 + G 74 -8.8 -3.19285 | overlap 1197716 CTTGTTTTGCCAGGA GTCGGATCATTT AAA AAAGGATCTGAC TATATCTTTAAAATA P9301_14291 1197577 - 1198194 + | glutamine amidotransferase P9301_14301 1198291 - 1198959 + | hypothetical protein TERM 780 1199636 - 1199617 - g 78 -2.2 -5.71638 | GAAGAATTAAAAAAA TATTCATA TATG TTTGAATA TCCATCAGATGAAGA P9301_14311 1198984 - 1200096 + | hypothetical protein TERM 781 1201062 - 1201014 - g 82 -8.5 -4.10161 | gap 1, opp_overlap 1201022, overlap 1200989 TATTATTCCTTAAAA TCCAAAATCCAGAAAAAGAATA TTTATT TTTTCTTTT-CTGGCTTTTGGA TTGGACTCGCCATAA TERM 782 1201402 - 1201415 + G 75 -2.5 -5.66684 | opp_overlap 1201402 CAACAAATCCTAATA TAAAA TATT TTTTA TTTTTTTATCCATTA P9301_14321 1200564 - 1202108 + | hypothetical protein manC 1202170 - 1203618 + | mannose-1-phosphate guanylyltransferase TERM 783 1204108 - 1204097 - g 71 -3 -5.29208 | AAAATAAAAAAGAAA CTAT GATA ATAG GAGTATCTTCATCTG P9301_14341 1203769 - 1204377 + | hypothetical protein TERM 784 1205279 - 1205263 - g 81 -3.8 -5.56568 | AGAGTATCAAAAAAA TCTTTA TCATT TAAAGA AAGTTCTTAATGTAG TERM 785 1205437 - 1205416 - g 93 -8.1 -5.13137 | TAAAGAAACCAAAAA TTCTCTTGA GATA CCAAGAGAA GATCATTCTAATATT P9301_14351 1204544 - 1205470 + | hypothetical protein P9301_14361 1206707 - 1205502 - | hypothetical protein TERM 786 1205796 - 1205826 + g 70 -8.4 -3.05997 | opp_overlap 1205821 TTGATGTTTTAATTC TGCTTCTGATGTAG GAG CTACATCAGAAAAA TATAATTTATCCCAA TERM 787 1206056 - 1206038 - G 91 -10.4 -4.08853 | opp_overlap 1206037 1206036 CTGAAGAGGAAATAA GGTAAAGA AGA TCTTTACC CATTCTTACAGTATT P9301_14371 1208644 - 1206887 - | hypothetical protein TERM 788 1207360 - 1207332 - G 75 -4.7 -5.03314 | overlap 1207359 GCTATTTTTAAAAAA GATTTATGAATTT TAT AAAGTCTTAAATC AGGATCGCCCAAATC TERM 789 1208475 - 1208495 + g 79 -2.7 -5.74122 | opp_overlap 1208478, overlap 1208478 TCCCATAAATCATAA AAATTTAAA AAT TTTAAATTC TTTTTTTCTATAGTG TERM 790 1208492 - 1208478 - G 73 -4.4 -5.06735 | opp_overlap 1208475 1208478 CATAAATCATAAAAA TTTAAA AAT TTTAAA TTCTTTTTTTCTATA TERM 791 1208478 - 1208492 + g 70 -4.4 -4.92669 | opp_overlap 1208478, overlap 1208475 CATAAATCATAAAAA TTTAAA AAT TTTAAA TTCTTTTTTTCTATA P9301_14381 1208715 - 1209701 + | hypothetical protein P9301_14391 1210551 - 1209844 - | hypothetical protein P9301_14401 1211474 - 1210539 - | hypothetical protein TERM 792 1211228 - 1211212 - G 78 -2.3 -5.84011 | overlap 1211227 AACAAAAAATAAAAA TCTTTAT TAT ATGAAGA GAGCTCCTCTGAAAT apt 1212043 - 1211525 - | adenine phosphoribosyltransferase TERM 793 1211780 - 1211798 + g 100 -13.2 -4.1552 | ATAAGTTGATAGTTT GCCTGGTA ATT TACCAGGC TTTCTTGCCAAGATA TERM 794 1212569 - 1212556 - g 72 -2.5 -5.37593 | opp_overlap 1212562, overlap 1212549 1212562 TTTGAAAGTAAAAAA TTAAA ATTT TTTAA AAACTTATACAAAGG pfs 1212076 - 1212894 + | nucleoside phosphorylase TERM 795 1212983 - 1212999 + T 83 -10.9 -2.62616 | TCGAACCGCTGACCC CCTGCAT GCC ATGCAGG TGCTCTACCAGCTGA P9301_14431 1214180 - 1213155 - | hypothetical protein TERM 796 1214357 - 1214341 - H 73 -5.3 -4.82855 | opp_overlap 1214333, overlap 1214333 1214349 TATGAAATTTAAAAA TTTTTAA ATC TTAAAAA GAAAATAATTAAATT TERM 797 1214533 - 1214571 + G 71 -7.7 -3.54424 | gap 1, opp_overlap 1214527 1214533 1214536, overlap 1214536 1214543 TACATGGAATTAAAA GAAGATCTAGTTCTTTCA ATAC TGAAAGAATT-GATCATC TTTACCAAGATCCAC TERM 798 1214543 - 1214562 + G 71 -8 -3.3062 | opp_overlap 1214527 1214536 1214533, overlap 1214536 1214533 TAAAAGAAGATCTAG TTCTTTCA ATAC TGAAAGAA TTGATCATCTTTACC gmd 1214430 - 1215524 + | gdpmannose 4,6-dehydratase P9301_14451 1215517 - 1216530 + | putative fucose synthetase P9301_14461 1218857 - 1216587 - | hypothetical protein TERM 799 1217499 - 1217512 + g 70 -3.9 -4.96028 | GTTAGATTCCTTATC TTGAT TTAA ATCAA TTCTTTTTTTTAGGG TERM 800 1218062 - 1218052 - G 70 -4 -5.06414 | TTGTCTGAAGAAAAA GATT CTG AATC AAAGAATAACTTATC lexA 1219535 - 1218918 - | SOS function regulatory protein, LexA repressor argF 1220521 - 1219595 - | ornithine carbamoyltransferase P9301_14491 1222412 - 1220550 - | cell division protein FtsH3 TERM 801 1222486 - 1222499 + r 71 -6.7 -4.17089 | GTTTTTTTTGGGTAA GTACC GTAC GGTAC TTTTACACATTTAAA P9301_14501 1223623 - 1222529 - | putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 802 1223253 - 1223267 + g 74 -8.6 -3.25088 | TTAACTTGTATTCCA GCTTCT TTT AGAAGC TTAATCCCTTTACCA P9301_14511 1224139 - 1223639 - | hypothetical protein P9301_14521 1224365 - 1224114 - | hypothetical protein TERM 803 1225125 - 1225111 - g 93 -2.9 -6.60239 | opp_overlap 1225111 AAAAACAAAAAAAAA TTACT CAAAT AGTAA TCTTCCCCTTTTTGG cobL 1224449 - 1225723 + | putative precorrin-6y methylase TERM 804 1225772 - 1225759 - T 72 -8.1 -3.14051 | TCAGGTTTAGCAACA TGGGG CAAC CCCCA ACCTAATTTATTTCT ppnK 1226645 - 1225737 - | inorganic polyphosphate/ATP-NAD kinase TERM 805 1226574 - 1226613 + g 82 -10.8 -2.7898 | opp_overlap 1226584, overlap 1226581 1226584 GTTTTCCAATTTTTT TTGGACAGAACTTGCAGT TTGA ACAGCAAGTTCTTTCCCA TCATTAACTATTAGC TERM 806 1226581 - 1226606 + g 87 -10.5 -3.63895 | opp_overlap 1226584, overlap 1226574 1226584 AATTTTTTTTGGACA GAACTTGCAGT TTGA ACAGCAAGTTC TTTCCCATCATTAAC pheS 1227723 - 1226716 - | phenylalanyl-tRNA synthetase alpha chain surE 1227792 - 1228601 + | survival protein SurE P9301_14571 1229114 - 1228581 - | hypothetical protein TERM 807 1229070 - 1229052 - G 74 -6.7 -4.28774 | GGATTGAACCCAAAA GCGTGTC CATCC AACACGC CGCATTCCAAATGAA ribF 1229183 - 1230106 + | putative riboflavin kinase/FAD synthase thiE 1230114 - 1231169 + | thiamine-phosphate pyrophosphorylase thiS 1231159 - 1231368 + | hypothetical protein P9301_14611 1231481 - 1231648 + | hypothetical protein P9301_14621 1231716 - 1231847 + | hypothetical protein P9301_14631 1232508 - 1231852 - | putative circadian phase modifier CpmA-like protein P9301_14641 1232951 - 1232505 - | hypothetical protein trmD 1234168 - 1232948 - | putative bifunctional enzyme: tRNA methyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase era 1235080 - 1234169 - | GTP-binding protein Era P9301_14671 1235119 - 1235646 + | hypothetical protein TERM 808 1235670 - 1235651 - T 93 -7.9 -5.14563 | opp_overlap 1235651 TCGCCCATTAAAAAA GCGTAGA AACAAG TCTACGC TTTAGATTAGTTATT TERM 809 1235651 - 1235670 + T 73 -7.9 -3.827 | opp_overlap 1235651 TCGCCCATTAAAAAA GCGTAGA AACAAG TCTACGC TTTAGATTAGTTATT P9301_14681 1236435 - 1235698 - | integral membrane protein, interacts with FtsH phoH 1237465 - 1236509 - | PhoH-like phosphate starvation-inducible protein TERM 810 1237219 - 1237203 - G 79 -8.1 -3.98913 | CCCATATTTAAAGAA CTTAAAG CAG CTTTAAG ATCTACCTCTGGTAC TERM 811 1237412 - 1237400 - G 71 -7.7 -3.56273 | overlap 1237397 CCCAGGACCAGATAA TGCTG TGG CAGCA TCAGAGCTTGGCAAA rpsP 1237867 - 1237502 - | 30S ribosomal protein S16 TERM 812 1237566 - 1237579 + g 76 -5.3 -4.96646 | TCTCCATCTTTAGTT TTAGC CTTA GCTAA TTTTTCCTTCTCTAA TERM 813 1237926 - 1237914 - R 70 -4.9 -4.81851 | ATTTAAAGGTAAAAA TATAG AAA CTATA AATCGGCAAAACCTT ffh 1239400 - 1237922 - | signal recognition particle protein (SRP54) P9301_14721 1241553 - 1239448 - | hypothetical protein TERM 814 1241979 - 1242006 + G 80 -7.1 -4.72986 | opp_overlap 1241972, overlap 1241972 GCACTAAGTGCGGGG GTTCCCTCATT TGAAGT AATGAGTGAAC TTTTTGGTAAAGCTA TERM 815 1242258 - 1242276 + G 71 -3.2 -5.29445 | TTAAATATGGCCCAG TTATGG AAATTAC CCATAA TTTTTGTTGTTGAAA acoA 1241667 - 1242740 + | pyruvate dehydrogenase E1 alpha subunit P9301_14741 1243683 - 1242742 - | type II alternative sigma-70 family RNA polymerase sigma factor TERM 816 1243672 - 1243682 + g 70 -4 -5.07053 | TGCTTGTGTTGGTAA TGAT GAA ATCA TTTTTTGACCTAATT P9301_14751 1245389 - 1243824 - | fused sugar kinase/uncharacterized domain-containing protein TERM 817 1244325 - 1244341 + g 71 -8.1 -3.3581 | opp_overlap 1244324 1244323, overlap 1244324 TAACCCTCCATAATC CAAAAGA TAG TCTTTTG ATTTTTGCCAATCAT trmU 1245436 - 1246593 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase lnt 1248073 - 1246586 - | putative apolipoprotein n-acyltransferase TERM 818 1246773 - 1246763 - G 71 -8.2 -3.35073 | ATCATCTTGAACTAA GCCC GAA GGGC CGGTATTTGATACTA TERM 819 1246904 - 1246915 + g 73 -4.4 -5.05116 | TATTAGTTTTGCTCC GCTA TTAA TAGC TTTTCTTATTTCTAG TERM 820 1247050 - 1247067 + g 75 -4.9 -5.09173 | opp_overlap 1247050 1247053 ATCCTTTTGAAAAAC TATCTAG AAAT CTAGGTA TTTTTTCACCTATTG TERM 821 1247661 - 1247628 - G 81 -3.1 -5.81412 | CCTATCCAAAAAAAA GGAGTTTGAGAAAGT ATCA ATTCACCCAAACCCC AAGTCAAAGATAAAA fkpA 1248160 - 1248732 + | FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) P9301_14791 1248811 - 1249284 + | putative nickel-containing superoxide dismutase precursor (NISOD) TERM 822 1249297 - 1249312 + F 77 -4.8 -5.43329 | TAATCAGAGTTATTT TCAAAA GTTT TTTTGA TTTTATTTTATTTTT TERM 823 1249656 - 1249640 - g 74 -3.1 -5.37593 | overlap 1249632 1249624 TCCTAAATTAAAAAA TTTTTTA ATT CAAAAAA ACAGAAGCACTTCTT P9301_14801 1249368 - 1249685 + | putative signal peptidase P9301_14811 1250315 - 1249644 - | hypothetical protein TERM 824 1249989 - 1250020 + g 71 -8.8 -2.84098 | opp_overlap 1249963, overlap 1249981 1249975 1249961 GTGACGATGGGCAAT TCCATTCTCATGCT TATG GGAATGAGAGTGGA TACTTAATTGAAAAG trpC 1251258 - 1250371 - | indole-3-glycerol-phosphate synthase TERM 825 1250554 - 1250570 + g 90 -8.1 -4.75356 | overlap 1250542 ATCTGCATATGTATG CATCAAT TCT ATTGATG TTTTTAAATCTGTTT lpd 1252710 - 1251271 - | dihydrolipoamide dehydrogenase TERM 826 1251713 - 1251734 + g 72 -8.7 -3.12351 | TGCGCTGCAGCTGTA TGGGCAAGC ATTA GTTTGCCCG TTACATCTCCAACGG TERM 827 1252431 - 1252445 + g 70 -4.3 -4.84527 | TTAAGACTAAATTAT TTGCA TGATC TGCAA TTTTTGATCTCTCGA P9301_14841 1253431 - 1252718 - | tRNA/rRNA methyltransferase (SpoU) TERM 828 1253657 - 1253634 - H 76 -8.4 -3.737 | opp_overlap 1253633 1253630 CAATTGTTTATTAAA TTTTTATTTC CCAA GAAATAAAAA AATATATTTTCACTT TERM 829 1254377 - 1254365 - g 73 -7.7 -3.66556 | opp_overlap 1254364 AATGCTGCAAGAGAA CCTGA AAT TCAGG ATCTATGCCAAATGC murA 1253753 - 1255123 + | UDP-N-glucosamine 1-carboxyvinyltransferase P9301_14861 1255369 - 1255262 - | hypothetical protein TERM 830 1256165 - 1256191 + G 88 -6.6 -5.22039 | opp_overlap 1256162 1256164, overlap 1256185 AAATATCAAAAAGGC TTCGAACCATTG ATT CAAGGGTTCAAA TTTTTTAAATTTAAC argD 1255658 - 1256911 + | acetylornithine aminotransferase TERM 831 1257928 - 1257911 - g 72 -4.9 -4.88228 | ACGCAATATTAAAAA CACTTCT AAAG AAAAGTG ATCACTTATTACTTG TERM 832 1257969 - 1257957 - g 73 -7.7 -3.57144 | TGTGCCAGTCCCAAA CCAAC CTA GTTGG CAATTAAACGATCTC TERM 833 1258087 - 1258100 + G 74 -6.7 -4.28925 | opp_overlap 1258086 TGGCCACCTAATCAT CCTGT TCTA ACAGG TTCTATTTTTTTAGT folC 1256923 - 1258155 + | putative bifunctional dihydrofolate/folylpolyglutamate synthase TERM 834 1258162 - 1258152 - T 80 -2.6 -6.08342 | opp_overlap 1258152 GAATAAAGAAAAAAA TTAA ATT TTAA ATTGTTCTTTTACTT P9301_14891 1259510 - 1258152 - | FAD/FMN-containing dehydrogenase codA 1260784 - 1259549 - | putative cytosine deaminase TERM 835 1260226 - 1260207 - G 73 -7.8 -3.64703 | TCTTTTTTATTGAAA GGGGGTAC AACA ACACCCCC TAAAATGCCTCCATT TERM 836 1261070 - 1261050 - H 70 -3.3 -5.4111 | AAGAATCATAAAAAA TTCCTAGCA AAG TGCTAACAA AAACAAAATCAGACG TERM 837 1261150 - 1261134 - g 75 -9.5 -2.83822 | overlap 1261136 GTTATTGGATAACCA CATTTGG ATG CCAAATG AACAAGGCTGATTCT P9301_14911 1261061 - 1262455 + | 2-methylthioadenine synthetase ddlA 1262469 - 1263536 + | D-alanine--D-alanine ligase P9301_14931 1263547 - 1263957 + | hypothetical protein ftsQ 1263954 - 1264679 + | cell division septal protein TERM 838 1265088 - 1265077 - g 72 -5.8 -4.4017 | opp_overlap 1265077 TCAACTTGGACAAAA CCTC ACTA GAGG TTTAGGTGCAGGTGG ftsZ 1264859 - 1265974 + | cell division protein FtsZ TERM 839 1266376 - 1266360 - g 78 -2.2 -5.8187 | overlap 1266362 1266364 GATTTAAGAAAAAAA TTGAGG AACAA CCTCTA GTCGTTTCAGATATG panB 1266131 - 1266904 + | putative ketopantoate hydroxymethyltransferase hemN 1268120 - 1266897 - | putative oxygen-independent coproporphyrinogen III oxidase TERM 840 1268433 - 1268464 + G 79 -10.2 -2.80939 | opp_overlap 1268432, overlap 1268432 1268437 CAAATAAGAACAATG CCTACGGACTTACT AATT AGTAGGTCTGTTGG ATTAATTTTAGGATT TERM 841 1268437 - 1268460 + G 71 -8.2 -3.28783 | opp_overlap 1268432, overlap 1268433 1268432 TAAGAACAATGCCTA CGGACTTACT AATT AGTAGGTCTG TTGGATTAATTTTAG P9301_14981 1268217 - 1269326 + | integral membrane protein P9301_14991 1269367 - 1270029 + | ATP-dependent Clp protease-like protein clpP 1270054 - 1270665 + | ATP-dependent Clp protease proteolytic subunit ilvC 1270777 - 1271766 + | ketol-acid reductoisomerase cbiB 1271754 - 1272767 + | putative cobalamin biosynthetic protein P9301_15031 1272823 - 1273068 + | high light inducible protein P9301_15041 1273535 - 1273278 - | hypothetical protein P9301_15051 1273836 - 1273594 - | beta-lactamase TERM 842 1273894 - 1273875 - R 79 -5.2 -5.46629 | AATATTCCAAAAAAA TTAATTAT TTTA ATAATTAA CAATTTTTAATCACA P9301_15061 1274202 - 1273891 - | hypothetical protein TERM 843 1274305 - 1274287 - R 100 -9.6 -6.09888 | opp_overlap 1274287 TTGCAATAAAAAAAA GATGCTCT AAA AGAGCACC TTGTTATTAAAGGAA TERM 844 1274287 - 1274305 + r 71 -7.4 -3.9461 | opp_overlap 1274287 TTGCAATAAAAAAAA GATGCTCT AAA AGAGCACC TTGTTATTAAAGGAA himA 1274613 - 1274338 - | histone-like DNA-binding protein TERM 845 1275497 - 1275487 - g 82 -2.6 -5.96894 | AGTGAAACAAAAAAA TAAT GGA ATTA ATAATAACTATGAAA glgX 1275239 - 1277272 + | putative isoamylase TERM 846 1277300 - 1277320 + F 79 -8.3 -4.11216 | GAATCGAACCCGCAT CTTCAGCTT GGA AGGCTGAGG TTTTACCACTAAACC melB 1277456 - 1278802 + | GPH family sugar transporter P9301_15101 1278812 - 1279567 + | putative transporter, membrane component P9301_15111 1279572 - 1279976 + | hypothetical protein P9301_15121 1280012 - 1281022 + | hypothetical protein TERM 847 1281504 - 1281515 + G 77 -3 -5.68039 | TTACCTAGGTAAATT TATG CACT CATA TTTTTTTATAAGTTT P9301_15131 1281028 - 1281621 + | hypothetical protein pyrF 1282333 - 1281605 - | orotidine 5'-phosphate decarboxylase tyrS 1283578 - 1282340 - | tyrosyl-tRNA synthetase TERM 848 1282699 - 1282726 + g 74 -9.4 -2.75712 | overlap 1282701 1282706 TCTGTAATTCACGAG GATTTGAGTTTT CCAG AAAACTTAAATC TAATTCAGTAAGTAA TERM 849 1282885 - 1282903 + g 72 -7.4 -3.94188 | opp_overlap 1282888, overlap 1282888 TCAAAATTGGCAGCA GAACACCA AAT TGGGGTTC TTGTTTAAAATGCCT TERM 850 1283445 - 1283455 + g 79 -2.6 -5.80727 | GGATCGATCCCGAGT TTAA CCC TTAA TTTTTTATTATTTTT P9301_15161 1283921 - 1283598 - | hypothetical protein P9301_15171 1284073 - 1284684 + | hypothetical protein TERM 851 1285907 - 1285897 - g 74 -6.8 -4.26079 | overlap 1285898 GCAAATGATCTAAAA GCTG CGT CAGC CCAGGCTGGTGAAGA pepB 1284709 - 1286181 + | leucyl aminopeptidase P9301_15191 1286796 - 1286194 - | peptide methionine sulfoxide reductase lpxB 1287991 - 1286813 - | lipid-A-disaccharide synthase TERM 852 1286881 - 1286904 + g 91 -5.5 -5.8096 | CTCCCAATTCTTTTT TTAAAAAAG CATAAC CTTTTTTAA TTTTTATTTTTTCTG TERM 853 1287446 - 1287457 + g 83 -4.4 -5.626 | overlap 1287444 AGTTCTAGCATCTTT CTTC AGAG GAAG TTTTTTTGTCAAATC lpxA 1288830 - 1287988 - | UDP-N-acetylglucosamine acyltransferase TERM 854 1288463 - 1288481 + g 70 -4 -5.10029 | opp_overlap 1288464, overlap 1288464 TAAGCCATCAACAAA TTATTATT GCC AATAATAG TTTTTTCGCCTTCAT fabZ 1289293 - 1288835 - | (3R)-hydroxymyristoyl-ACP dehydratase lpxC 1290147 - 1289311 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase P9301_15241 1292286 - 1290148 - | outer envelope membrane protein-like protein purC 1293061 - 1292324 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 855 1292772 - 1292803 + g 79 -3.3 -5.66926 | gap 2, opp_overlap 1292772, overlap 1292775 AAAGAACCATAAGCA GT-ATTCC-TTAGAA CAAT TTCTAATGGAATTAC TTTTATTTTTTTTGC purD 1293197 - 1294528 + | phosphoribosylglycinamide synthetase TERM 856 1295146 - 1295133 - g 93 -6.7 -5.45652 | opp_overlap 1295133 ACCCCTAATAAAAAA GCACT AGCA AGTGC TGCTTTAACTAGAGA nblS 1294533 - 1296599 + | two-component sensor histidine kinase kaiC 1298125 - 1296596 - | circadian clock protein KaiC kaiB 1298511 - 1298194 - | circadian clock protein KaiB TERM 857 1298604 - 1298585 - H 75 -5.8 -4.98461 | opp_overlap 1298589 AAATAAGAAAATAAA CAAACAAT TATG ATTGCTTG TTGGGCTTAATCAAA rplU 1298653 - 1299093 + | 50S ribosomal protein L21 rpmA 1299103 - 1299363 + | 50S ribosomal protein L27 P9301_15321 1300030 - 1299356 - | hypothetical protein TERM 858 1299644 - 1299658 + g 78 -2.1 -5.78622 | TGTATCTTGAATTGT CTTGC AAAAA GTAAG TTTTTTTTCGACTCC truB 1300173 - 1301090 + | putative tRNA pseudouridine 55 synthase spoIID 1302269 - 1301094 - | sporulation protein SpoIID TERM 859 1302024 - 1302036 + g 72 -3.5 -5.1286 | opp_overlap 1302024 ATTTCTATCAAAATA TAAAA TTT TTTTA TTTTTCTCATTTTTC elaC 1302358 - 1303296 + | metallo-beta-lactamase superfamily protein TERM 860 1303852 - 1303834 - g 75 -8.2 -3.6284 | AATCATTATGTGAAA GAGCTAGT GGA ACTAACTC ACAAACTGGAGTTAA P9301_15361 1303371 - 1303931 + | pentapeptide repeat-containing protein P9301_15371 1304309 - 1303941 - | hypothetical protein TERM 861 1303969 - 1303988 + g 100 -10 -5.21709 | opp_overlap 1303969 GAAGGGAAGATATTA CCAGGTTC TTTT GAGCCTGG TTTTTTGCTATACCA TERM 862 1304343 - 1304323 - R 100 -11.1 -6.24157 | ATTCACAAAAAAAAA GCCACCTTC ATA GAGGGTGGC AGAGAAATTATCAAT P9301_15381 1304688 - 1304389 - | ferredoxin TERM 863 1304479 - 1304465 - G 70 -4.2 -4.95167 | CAAGTAAGAACAAAA CCAGCT TCT AGTTGG TCGTCATCCAAGAAA prmA 1305734 - 1304823 - | putative methyltransferase for ribosomal protein L11 TERM 864 1304998 - 1305008 + g 74 -5.4 -4.78572 | CACTTATAGATATTT GGAA TCA TTCC TTTTATTACTTCAGC serA 1307339 - 1305753 - | D-3-phosphoglycerate dehydrogenase TERM 865 1306164 - 1306179 + g 73 -7.6 -3.72241 | AATACCTCTTGAATC TGCTTC TAGC GAAGCA TTTACATAATTAATC TERM 866 1306603 - 1306577 - G 95 -8.8 -5.24129 | opp_overlap 1306577 1306576 1306579 1306595 1306598 GTTCTTTAGAAAAAA CATCTATTGCAG CAC CTGCAATCAATG ATTGATTTAAAGCTT P9301_15411 1307517 - 1308005 + | hypothetical protein P9301_15421 1308006 - 1308797 + | S4-like domain-containing protein TERM 867 1309185 - 1309195 + G 71 -3.2 -5.18643 | overlap 1309180 ATCAATTTTTTAACT TCAG TTA CTGG TTTTATTTTCCTTGG P9301_15431 1308987 - 1309604 + | steroid 5-alpha reductase C-terminal domain-containing protein TERM 868 1309670 - 1309654 - g 76 -6.5 -4.55295 | TCTTCTAGAAACAAA GAGGGCA AAT CACCCTC TAATAAATGGATACA P9301_15441 1309597 - 1310148 + | hypothetical protein P9301_15451 1310223 - 1310396 + | hypothetical protein P9301_15461 1310939 - 1310388 - | hypothetical protein P9301_15471 1312231 - 1311083 - | DNA photolyase-like protein TERM 869 1312013 - 1312031 + g 77 -4.6 -5.1417 | TCTCCAAAATATTTC TTCAACAA ATT TAGTTGAA TTTTTGATTTTGTAC P9301_15481 1312507 - 1313256 + | NAD-dependent DNA ligase N-terminus P9301_15491 1313364 - 1314293 + | short-chain dehydrogenase/reductase P9301_15501 1314554 - 1314288 - | hypothetical protein murD 1314655 - 1316085 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase P9301_15521 1316171 - 1316485 + | MATH domain-containing protein P9301_15531 1317231 - 1316500 - | hypothetical protein TERM 870 1316834 - 1316848 + g 72 -3.6 -5.26119 | AATGAAATTTGATCA TATCGA GGT TTGATA TTTTCTTTTTGAGGG TERM 871 1317296 - 1317317 + r 73 -5.3 -4.74653 | AAAATTATAAATTAT TAAAAAGTG AAAT TACTTTTTA TTTATTTGTTGATTT P9301_15541 1317447 - 1317319 - | hypothetical protein P9301_15551 1318066 - 1317530 - | hypothetical protein P9301_15561 1318548 - 1318063 - | hypothetical protein TERM 872 1318298 - 1318287 - G 80 -5.8 -5.08824 | CTTTTATCCAAAAAA CAGG ATTA CCTG TATAAAAATCACCTC P9301_15571 1319386 - 1318637 - | GAF domain-containing protein P9301_15581 1320750 - 1319506 - | flavoprotein TERM 873 1319907 - 1319924 + g 79 -2.8 -5.80951 | TCATCTTGCCTTTGT TTAATC TTAAAT GATTAA TTTTTTCTTTTAACT P9301_15591 1320936 - 1321172 + | hypothetical protein TERM 874 1321908 - 1321932 + G 76 -3.7 -5.4505 | CAATAATTTTTTTGA TTAGTCTAAAA GGA TTTAAGATTAA TTTTTTCTTGAAAAA TERM 875 1322060 - 1322037 - g 74 -7.4 -4.08064 | opp_overlap 1322037 AAGTTGTGTTTAAAA CCCTTCCCAT AGGG ATAGGATGGG CTTTATTAAGCATAT P9301_15601 1321313 - 1322185 + | hypothetical protein P9301_15611 1322263 - 1322385 + | hypothetical protein P9301_15621 1322516 - 1322382 - | hypothetical protein P9301_15631 1322636 - 1322911 + | hypothetical protein P9301_15641 1323003 - 1323173 + | hypothetical protein P9301_15651 1323420 - 1323238 - | hypothetical protein P9301_15661 1323653 - 1323835 + | hypothetical protein P9301_15671 1324422 - 1324586 + | hypothetical protein P9301_15681 1324655 - 1324990 + | hypothetical protein TERM 876 1324994 - 1325004 + T 86 -2.6 -6.47325 | opp_overlap 1324994 AAACTTATTTAGAAA TTAA CTC TTAA TTTTTTTTCTTTTTT P9301_15691 1325320 - 1324994 - | Type I restriction modification DNA s TERM 877 1325311 - 1325325 + g 71 -2.9 -5.243 | GTTTTTTACTTATGA TTTTC TTCAT GAAAA TTTTTTACTAGTTTA TERM 878 1325473 - 1325489 + H 88 -5.2 -5.84381 | opp_overlap 1325473 AAGCTTCGTAAGGAA TGAGTA TTTAT TACTCA TTTTTTTGTTAATGA TERM 879 1325604 - 1325615 + G 81 -2.2 -6.08563 | CTCTAGGCATTACAG TTGC AATA GCAG TTTTTTTTGTCTCTT TERM 880 1325697 - 1325684 - g 91 -5.3 -5.86976 | GCAGAAAAGAAAAAA TCCTT AATT AAGGA ACAAAAAGAATTAAA P9301_15701 1325537 - 1325755 + | M protein-like P9301_15711 1325840 - 1325995 + | hypothetical protein P9301_15721 1326076 - 1327182 + | Fatty acid desaturase, type 2 P9301_15731 1327338 - 1327186 - | hypothetical protein P9301_15741 1327769 - 1327930 + | hypothetical protein TERM 881 1327959 - 1327978 + T 73 -7.9 -3.72941 | opp_overlap 1327958 AATATTTTTACCAAT GCTGCTT ATAAAA AAGCAGC TTATGTGATTTTTGT P9301_15751 1328212 - 1328069 - | hypothetical protein TERM 882 1329812 - 1329799 - g 71 -3.1 -5.27477 | overlap 1329801 ATCTTAATTAAAAAA GCCTT TAAA AAAGC ATATCTTTTTAATCC P9301_15761 1328773 - 1329939 + | fatty acid desaturase, type 2 P9301_15771 1330057 - 1330218 + | hypothetical protein P9301_15781 1330887 - 1330270 - | hypothetical protein TERM 883 1331222 - 1331193 - H 100 -11.5 -4.86033 | opp_overlap 1331193 AAATTCTTATAAAAA GAGTCAGCCTGTA TCCC TACTAGCTGACTC TTAATAATATATTAA TERM 884 1331193 - 1331222 + H 80 -9.3 -3.28003 | opp_overlap 1331193 AAATTCTTATAAAAA GAGTCAGCCTGTA TCCC TACTAGCTGACTC TTAATAATATATTAA TERM 885 1331407 - 1331397 - H 77 -3.2 -5.7946 | TGTTCAACAAAAAAA GGAA TAA TCCC TTATTTTCTTTACAT P9301_15791 1331467 - 1331574 + | hypothetical protein P9301_15801 1331574 - 1331714 + | high light inducible protein-like protein TERM 886 1331727 - 1331770 + F 95 -4.3 -6.44931 | opp_overlap 1331740, overlap 1331728 1331740 1331765 TAATATAAGTTTTCA ATTTT-CATAAAAAGCCTAAT CAAA ATTAGGCTTTTT-TGCAAAAA TTTTTTTTTGTTATT TERM 887 1331728 - 1331768 + F 80 -9.4 -3.21221 | gap 1, opp_overlap 1331740, overlap 1331727 1331740 1331765 AATATAAGTTTTCAA TTTTCATAAAAAGCCTAAT CAAA ATTAGGCTTTTT-TGCAAA AATTTTTTTTTGTTA TERM 888 1331740 - 1331757 + F 91 -8.5 -5.01732 | opp_overlap 1331740, overlap 1331728 1331727 CAATTTTCATAAAAA GCCTAAT CAAA ATTAGGC TTTTTTGCAAAAATT TERM 889 1331757 - 1331740 - f 88 -8.5 -4.8543 | opp_overlap 1331740 1331728 1331727 CAATTTTCATAAAAA GCCTAAT CAAA ATTAGGC TTTTTTGCAAAAATT P9301_15811 1332039 - 1332179 + | hypothetical protein hli7 1332461 - 1332255 - | high light inducible protein-like protein TERM 890 1332762 - 1332790 + H 100 -12.5 -3.92659 | TAATTAGGTCGTCAT GAGCTTGCAGGTG GGA TACTTGCAGGCTC TTTCAATTTTAAAAG P9301_15831 1333449 - 1334654 + | putative permease P9301_15841 1335304 - 1334720 - | hypothetical protein P9301_15851 1335554 - 1335390 - | hypothetical protein P9301_15861 1335879 - 1336034 + | hypothetical protein P9301_15871 1336765 - 1336289 - | carbon storage regulator-like protein P9301_15881 1336961 - 1337341 + | hypothetical protein TERM 891 1337349 - 1337367 + T 83 -3.2 -6.13 | opp_overlap 1337345 1337343, overlap 1337351 CAAAATAGATATCTT AATTTAAG AAA CTTAAATA TTTTTTTTTCCATCT TERM 892 1337351 - 1337365 + T 71 -5.8 -4.70383 | opp_overlap 1337345 1337343, overlap 1337349 AAATAGATATCTTAA TTTAAG AAA CTTAAA TATTTTTTTTTCCAT P9301_15891 1337564 - 1337361 - | regulatory proteins, DeoR-like protein P9301_15901 1337730 - 1337608 - | hypothetical protein P9301_15911 1337886 - 1338104 + | hypothetical protein TERM 893 1339089 - 1339099 + T 73 -6.8 -4.27512 | ACAAATAGGGCAATG TGGG AAT CCCA TTATTTATTATCCAA P9301_15921 1339273 - 1339100 - | hypothetical protein P9301_15931 1339883 - 1340092 + | hypothetical protein TERM 894 1340183 - 1340201 + F 100 -11 -3.9122 | opp_overlap 1340181 1340183, overlap 1340171 AGAGTTTCACCAAGA GGGGTCAA TTT TTGGCCCC TTCTTTGCGGAGATA TERM 895 1340201 - 1340183 - f 75 -8.8 -3.14229 | opp_overlap 1340183 1340171, overlap 1340181 AGAGTTTCACCAAGA GGGGTCAA TTT TTGGCCCC TTCTTTGCGGAGATA P9301_15941 1340404 - 1340619 + | hypothetical protein P9301_15951 1340696 - 1340851 + | hypothetical protein TERM 896 1340919 - 1340934 + F 83 -6.1 -5.32699 | opp_overlap 1340919 GTCGATCTAAACTTA GAGGG ATAAAC CCCTC TTTTTTAATGTTTAA P9301_15961 1341001 - 1341117 + | hypothetical protein P9301_15971 1341114 - 1341254 + | hypothetical protein TERM 897 1341422 - 1341397 - f 93 -7.6 -5.1615 | opp_overlap 1341402, overlap 1341400 CTAATACCTAAAAAA TAAGAGGGCA TATATT TGCCCTCTTC GAGTCTTATGCACCT TERM 898 1341419 - 1341400 - f 93 -9.3 -4.65666 | opp_overlap 1341402, overlap 1341397 ATACCTAAAAAATAA GAGGGCA TATATT TGCCCTC TTCGAGTCTTATGCA P9301_15981 1341967 - 1342071 + | hypothetical protein P9301_15991 1342187 - 1342594 + | hypothetical protein P9301_16001 1343367 - 1343260 - | hypothetical protein P9301_16011 1343557 - 1343727 + | hypothetical protein P9301_16021 1344063 - 1343755 - | hypothetical protein P9301_16031 1344383 - 1345099 + | dienelactone hydrolase TERM 899 1345628 - 1345648 + G 74 -6.2 -4.41494 | opp_overlap 1345628 TTTGGTTCGCAGCAA TTGGAGCA AAAGA TGTTCCAA TTTTAATTCCCGCTG P9301_16041 1345246 - 1345671 + | hypothetical protein TERM 900 1345741 - 1345711 - f 80 -9.9 -2.82803 | opp_overlap 1345719, overlap 1345716 1345719 TATTTACATTCAAAC TAAAATAAGGAGC AGTTA GCTCCTTTTTTTA TGACTGCTCAAAATT TERM 901 1345736 - 1345716 - f 71 -5.4 -4.57516 | opp_overlap 1345719, overlap 1345711 1345719 ACATTCAAACTAAAA TAAGGAGC AGTTA GCTCCTTT TTTTATGACTGCTCA TERM 902 1345719 - 1345733 + F 93 -7.1 -5.64274 | opp_overlap 1345716 1345711 1345719 TTCAAACTAAAATAA GGAGC AGTTA GCTCC TTTTTTTATGACTGC TERM 903 1345733 - 1345719 - f 77 -7.1 -4.38472 | opp_overlap 1345719, overlap 1345716 1345711 TTCAAACTAAAATAA GGAGC AGTTA GCTCC TTTTTTTATGACTGC P9301_16051 1345741 - 1346049 + | hypothetical protein P9301_16061 1346089 - 1346541 + | hypothetical protein P9301_16071 1346626 - 1347267 + | hypothetical protein P9301_16081 1347258 - 1347656 + | hypothetical protein P9301_16091 1347661 - 1347975 + | hypothetical protein P9301_16101 1348058 - 1348810 + | hypothetical protein P9301_16111 1348858 - 1349370 + | hypothetical protein TERM 904 1349396 - 1349378 - T 100 -11.8 -5.4505 | opp_overlap 1349378 1349380 1349382 TGTGGTAATAAAAAA GAGAGCTT TTT AAGCTCTC TTAAATACGAAATGT TERM 905 1349378 - 1349396 + T 90 -11.8 -3.05935 | opp_overlap 1349378, overlap 1349380 1349382 TGTGGTAATAAAAAA GAGAGCTT TTT AAGCTCTC TTAAATACGAAATGT TERM 906 1349380 - 1349394 + T 71 -8.6 -3.08798 | opp_overlap 1349378, overlap 1349378 1349382 TGGTAATAAAAAAGA GAGCTT TTT AAGCTC TCTTAAATACGAAAT P9301_16121 1349613 - 1349428 - | hypothetical protein TERM 907 1349580 - 1349592 + g 72 -4.9 -4.81851 | opp_overlap 1349580 TAGAAGTCTTTAAAA GTTTT TTT AAAAC TTTTTCAGTTTCACT P9301_16131 1350126 - 1349614 - | hypothetical protein TERM 908 1350050 - 1350030 - GR 75 -8.3 -3.64487 | opp_overlap 1350030 1350027, overlap 1350033 GGATACCGCTAAGAA TGACTGTCT CAA AGACAGGCA TAATATCTGTTTTCG TERM 909 1350047 - 1350033 - GR 71 -8.6 -2.93549 | opp_overlap 1350030 1350027, overlap 1350030 TACCGCTAAGAATGA CTGTCT CAA AGACAG GCATAATATCTGTTT P9301_16141 1350424 - 1350077 - | hypothetical protein TERM 910 1350227 - 1350239 + gr 72 -3.4 -5.252 | GATGCGATCAAATCC TGCT TCTTT AGCA TTTTTTCTCGCCATC TERM 911 1350416 - 1350390 - GR 77 -7.5 -4.08767 | gap 1 TCTATTGTTCTAAAA TCTTC-CTCTAA GTAT TTAGAGTGAAGA GTTGACATGAGAATT TERM 912 1350620 - 1350605 - R 70 -4.7 -4.75174 | TATTTAATTTAAAAA TAGCC ATGGCG GGCTA ATAGAGGGGAGAGTA P9301_16151 1352087 - 1351101 - | hypothetical protein P9301_16161 1352603 - 1352109 - | hypothetical protein P9301_16171 1352738 - 1353058 + | hypothetical protein TERM 913 1353384 - 1353400 + F 84 -8.7 -4.19817 | opp_overlap 1353384 AGAGAGAGCATTCAA CCTAGTC TAT GACTGGG TTTTACATGCCTAGC P9301_16181 1353670 - 1354128 + | hypothetical protein P9301_16191 1354387 - 1354136 - | hypothetical protein TERM 914 1354416 - 1354428 + r 72 -6.3 -4.386 | opp_overlap 1354425 TATTGGAATTTAATT CTACA AAA TGTAG TTTTCTCCAAAATTA TERM 915 1354664 - 1354685 + r 73 -8.9 -2.77009 | opp_overlap 1354669 1354670, overlap 1354663 1354670 TTTTTTTTGGGAAGG GGAAATTTT TTCA AAAATTTCC AATTTTATTTATCTT P9301_16201 1355072 - 1354701 - | hypothetical protein TERM 916 1354955 - 1354969 + g 91 -7.2 -5.29782 | opp_overlap 1354953 AGAGTAGAAGGTACA GTGAAT TGA ATTCAC TTTTTTGTAACTCTA TERM 917 1355023 - 1355013 - G 74 -5.4 -4.91873 | opp_overlap 1355013 TACACCAATTAAAAA GCAA AAT TTGC CTTTTTTTAAATCTT rpoZ 1355311 - 1355075 - | DNA-directed RNA polymerase subunit omega TERM 918 1356119 - 1356139 + G 71 -5.5 -4.64676 | TGGTGGGAAAGATAT TGATCAATG GAT CGTTGATTA TTTTATTCCAGGTCA P9301_16221 1355409 - 1356977 + | HSP70 family molecular chaperone pyrR 1357521 - 1356985 - | pyrimidine regulatory protein PyrR TERM 919 1358386 - 1358368 - g 81 -4.6 -5.43414 | ACTACATAGAAAAAA GTTATGCC AAA AACATAAC CGATGAATTTATAGA gpmI 1357659 - 1359281 + | phosphoglyceromutase secG 1359304 - 1359531 + | preprotein translocase subunit SecG TERM 920 1359564 - 1359544 - T 100 -10.5 -5.15117 | opp_overlap 1359544 1359551 TAAAACTTGAAAAAA GGGACCATT TTG AATGATCCC TTTCAAAAATTTATT TERM 921 1359544 - 1359564 + T 75 -8.3 -3.60475 | opp_overlap 1359544, overlap 1359551 TAAAACTTGAAAAAA GGGACCATT TTG AATGATCCC TTTCAAAAATTTATT groEL 1361234 - 1359597 - | chaperonin GroEL TERM 922 1361306 - 1361281 - R 81 -5.6 -5.43866 | opp_overlap 1361281 TAATTTTTAAAAAAA TACTTTAGCT TACTAC AGCTAAAATA TCCTTTTCTGAGAGT groES 1361596 - 1361285 - | co-chaperonin GroES TERM 923 1361657 - 1361647 - H 71 -5.4 -4.60808 | overlap 1361643 TCATAAAAATAGAAA GAGA AAT TCTC TATCCGTATCATCAA TERM 924 1362962 - 1362951 - g 72 -5.8 -4.49311 | opp_overlap 1362951 ATGAGCATTACAAAA CAGC CAGA GCTG TTCAATCCACTTTAC TERM 925 1363090 - 1363071 - g 73 -4.4 -5.09204 | opp_overlap 1363071 ACAGGGCAAGAAAAA TTGAAAAA TTTC TTTCTCAA CCTTTCTTTGTAGCA atpD 1361816 - 1363276 + | F0F1 ATP synthase subunit beta TERM 926 1363297 - 1363274 - f 70 -4.1 -5.10601 | ATAAAATCAGAAAAA TAAATATTT GAATAT AAATATTTA ACCTTCAATAATCTC TERM 927 1363599 - 1363582 - g 82 -8.5 -4.05033 | TGGATCTGAGATAAA TGTTCAG AATG CTGAACA AGACCTTAAAGAAGC atpC 1363319 - 1363723 + | F0F1 ATP synthase subunit epsilon P9301_16301 1364203 - 1363727 - | hypothetical protein TERM 928 1364138 - 1364150 + g 86 -4.1 -5.88061 | AGGATTTTTAGACTT TAGTG AAT CACTG TTTTTTTCCTTTTTT P9301_16311 1364469 - 1364311 - | hypothetical protein TERM 929 1364380 - 1364363 - G 74 -8.5 -3.34344 | opp_overlap 1364362 1364360 GTAGCTTCCAATGAA TCCCAAA GATC TTTGGGA ATATCGTTTTCTTCT pepP 1365849 - 1364524 - | putative aminopeptidase P TERM 930 1365996 - 1366006 + G 71 -3.2 -5.1287 | GCATGTTGTTCGGGA GTAG AAG CTGC TTTTTTAGCTGTAAA TERM 931 1366454 - 1366444 - g 71 -5.4 -4.72486 | GACAAATGGCAAAAA TTGG AAG CCAA AAAGGTTTAATAGAA P9301_16331 1365924 - 1366901 + | hypothetical protein TERM 932 1368010 - 1368022 + G 82 -7.7 -4.386 | AAGAGATATTTGTAA GAAGC AAA GCTTC TTTTATAGAACCTTC P9301_16341 1366905 - 1368146 + | GTPase SAR1 and related small G protein TERM 933 1368229 - 1368219 - g 86 -4 -5.71712 | opp_overlap 1368219 TTGGACACAAAAAAA TTCT TGA AGAA TTATCCAAAATTTAT nadD 1368155 - 1368733 + | nicotinic acid mononucleotide adenylyltransferase nadE 1368730 - 1370427 + | carbon-nitrogen hydrolase:NAD+ synthase P9301_16371 1371482 - 1370433 - | hypothetical protein TERM 934 1371240 - 1371262 + g 74 -7.1 -4.13654 | TATCCCAATTTTCTG TTGCTTTAC CCTCT GTAAAGCGA TTTCTCCTTTAGCAA TERM 935 1371304 - 1371318 + g 81 -4.4 -5.40072 | opp_overlap 1371304 CTATAACCCTCAACA TAAAAA ATA TTTTTA TTTTTTTCAGAAAGA TERM 936 1371529 - 1371540 + r 73 -3 -5.7946 | ATTAGCTAATACAGC CTTA ATTT TAAG TTTTTTTGTTCCAAA P9301_16381 1371702 - 1371511 - | hypothetical protein P9301_16391 1372025 - 1371699 - | ferredoxin P9301_16401 1372992 - 1372042 - | F0F1 ATP synthase subunit gamma atpA 1374528 - 1373011 - | F0F1 ATP synthase subunit alpha atpH 1375101 - 1374559 - | F0F1 ATP synthase subunit delta P9301_16431 1375613 - 1375101 - | F0F1 ATP synthase subunit B TERM 937 1375234 - 1375252 + g 75 -9.6 -2.79133 | opp_overlap 1375233 CGAAGTTGAGAAATT GCTCTGGA TGC TTCAGAGC TCTCATCAGAGATTG P9301_16441 1376071 - 1375610 - | F0F1 ATP synthase subunit B' TERM 938 1375831 - 1375861 + g 91 -8.4 -5.0538 | overlap 1375834 CTTCTGTACGAGCAC TTTGAAGCTGAGTT AAT AAATCAGCTTCTAA TTTTTTAACCTCAGA TERM 939 1375834 - 1375858 + g 84 -10.1 -3.38726 | overlap 1375831 CTGTACGAGCACTTT GAAGCTGAGTT AAT AAATCAGCTTC TAATTTTTTAACCTC atpE 1376386 - 1376141 - | F0F1 ATP synthase subunit C TERM 940 1376533 - 1376511 - R 75 -9.2 -2.62396 | opp_overlap 1376509, overlap 1376513 1376515 TATTTTGCCAGATTA CAGACCCTTT GTA AAAGCGTCTG AATGTATCTGGAAAC atpB 1377276 - 1376551 - | F0F1 ATP synthase subunit A atp1 1377775 - 1377299 - | ATP synthase subunit 1 TERM 941 1378311 - 1378301 - g 77 -4 -5.41143 | TACTTCTTAAAAAAA CAAA TTA TTTG GACAATTCCTGGAAT TERM 942 1378311 - 1378331 + G 90 -4.7 -5.72053 | overlap 1378314 AAAAACAAATTATTT GGACAATTC CTG GAATTGGTC TTTTTTATTTCGTTC P9301_16481 1378043 - 1379278 + | cell division protein FtsW TERM 943 1379951 - 1379967 + G 74 -7.3 -4.11472 | opp_overlap 1379951, overlap 1379950 ATTTAGTCAAATAAT TCCTACT CTT AGTGGGA TATTTTTAGTTTCCC ccdA 1379361 - 1380017 + | putative c-type cytochrome biogenesis protein CcdA TERM 944 1381091 - 1381072 - g 82 -5 -5.41143 | opp_overlap 1381075 TATCTCTGAAAAAAA TAATCCCC AGCA GTGGATTA ATAATTAAAAATGAT resB 1380018 - 1381304 + | putative c-type cytochrome biogenesis protein Ccs1 P9301_16511 1381711 - 1381301 - | 7-cyano-7-deazaguanine reductase TERM 945 1381555 - 1381542 - G 71 -6.7 -4.08767 | CTTAGCTTTGCAAAA TCTGG ATAA CCAGA AAAGGGGCACTTACA P9301_16521 1381890 - 1382135 + | hypothetical protein glnB 1382160 - 1382498 + | nitrogen regulatory protein P-II TERM 946 1382511 - 1382487 - T 72 -7.9 -3.50335 | opp_overlap 1382491, overlap 1382490 GGCGATAAAGATGAA GAAGCTCTCTA ATT CAGAGAGTTTC ATTAACTAAATTTTG P9301_16541 1383312 - 1382500 - | rRNA methyltransferase TERM 947 1383698 - 1383714 + G 70 -8.1 -3.15544 | opp_overlap 1383698 TGCATGTGAAGCAAA TTTTTCC CTA GGAAAAA TTCCTGAGAATGCCA TERM 948 1383714 - 1383698 - g 77 -8.1 -3.91911 | opp_overlap 1383698 TGCATGTGAAGCAAA TTTTTCC CTA GGAAAAA TTCCTGAGAATGCCA purB 1383597 - 1384892 + | adenylosuccinate lyase fumC 1384941 - 1386326 + | fumarate hydratase P9301_16571 1389063 - 1386337 - | putative DNA helicase TERM 949 1387544 - 1387558 + g 75 -2.8 -5.54079 | TTCAAGAGTCTTCTT TCTTCT TTA AGACGA TTTTTTAATTTTTCA TERM 950 1387811 - 1387824 + g 74 -6.7 -4.19577 | opp_overlap 1387811 TTTGGTTTGCTAATA GCTAG TGCA CTAGC TTCTTTTGCACCTTC bioF 1389203 - 1390342 + | putative 8-amino-7-oxononanoate synthase TERM 951 1390682 - 1390670 - g 88 -6.3 -5.33026 | GAATGGAAACAAAAA TCATC AAA GATGA TCCTAAGGATATGTT P9301_16591 1390339 - 1391043 + | hypothetical protein P9301_16601 1391036 - 1391806 + | methylase bioD 1391770 - 1392468 + | putative dethiobiotin synthase TERM 952 1393559 - 1393548 - g 74 -3 -5.40625 | ACATCATATAAAAAA GATA AGGG TATC CGGCACAATTGCTGC bioA 1392469 - 1393770 + | putative diaminopelargonic acid synthase P9301_16631 1394036 - 1393779 - | hypothetical protein P9301_16641 1394493 - 1394053 - | DnaJ-like protein gidB 1394583 - 1395296 + | putative glucose inhibited division protein B P9301_16661 1396492 - 1395299 - | aldo/keto reductase fer 1396862 - 1396503 - | hypothetical protein TERM 953 1396814 - 1396824 + g 75 -2.6 -5.52909 | overlap 1396796 1396794 CGGGCTCCCAGCCTG TAAT CTC ATTA TTTTTTTCAGTATTA P9301_16681 1397264 - 1396872 - | hypothetical protein P9301_16691 1397466 - 1397251 - | hypothetical protein TERM 954 1397592 - 1397610 + r 72 -4 -5.32944 | overlap 1397591 1397593 AATTTTTATATACTG TTTTTTTT AAT AAAAAAAG TTTTTTAATTATAAA TERM 955 1397629 - 1397610 - R 73 -2.2 -5.7946 | opp_overlap 1397591, overlap 1397612 1397628 TTTTTAATAAAAAAA GTTTTTTA ATTA TAAAAACC TTGCATTCCCATTGA TERM 956 1397651 - 1397628 - R 72 -4.7 -4.98255 | gap 1, opp_overlap 1397591, overlap 1397610 TTTTAATTATAAAAA CCTTGCATTC CCATT GAAT-CAAGG GCAGTTTTTGCTTCT P9301_16701 1398382 - 1397615 - | hypothetical protein P9301_16711 1398548 - 1398402 - | hypothetical protein P9301_16721 1399656 - 1398613 - | putative Fe-S-cluster redox protein hli3 1399838 - 1399686 - | putative high light inducible protein rpoC2 1403993 - 1399893 - | DNA-directed RNA polymerase subunit beta' TERM 957 1400654 - 1400666 + g 70 -4.1 -4.98616 | TAGATTCTCGAGCCG CTTCT ATA AGAGG TTTTTGATCTTTTAA TERM 958 1402712 - 1402727 + g 71 -7.6 -3.55801 | opp_overlap 1402712 GCGATCCACTAGAGA CCTCAA TTTT TTGAGG TTTGCCAGAATTACT rpoC1 1405931 - 1404027 - | DNA-directed RNA polymerase subunit gamma rpoB 1409265 - 1405972 - | DNA-directed RNA polymerase subunit beta TERM 959 1409022 - 1409042 + g 83 -8.3 -4.26461 | opp_overlap 1409017 AAGTTACATACATTT GAGATGCAA ATG TAGCATCTC TTCTTTTAGCTTCCT tatD 1410295 - 1409501 - | TatD family deoxyribonuclease rpsT 1410606 - 1410313 - | 30S ribosomal protein S20 TERM 960 1410375 - 1410391 + g 78 -2.3 -5.82316 | overlap 1410377 TTCTATTAGCTCCAT TATTCTT GTG AAGAACA TTTTTTTTAACTGCT hisD 1410728 - 1412014 + | histidinol dehydrogenase rpiA 1412706 - 1412011 - | ribose 5-phosphate isomerase P9301_16811 1413903 - 1412773 - | trypsin-like serine protease P9301_16821 1414063 - 1414530 + | hypothetical protein nusA 1414567 - 1415970 + | transcription elongation factor NusA TERM 961 1416160 - 1416149 - g 91 -4.4 -5.9663 | opp_overlap 1416149 AAAGATTAAAAAAAA GCTT CAAA AAGC TTTAAAAACATTTTT P9301_16841 1415967 - 1416239 + | nucleic-acid-binding protein implicated in transcription termination TERM 962 1416464 - 1416448 - g 71 -2.3 -5.34208 | AAAAAAAATTAAAAA TCTTATT AAT AAAAAGA ATTCAGATAAAAAAA infB 1416296 - 1419640 + | translation initiation factor IF-2 P9301_16861 1419893 - 1419657 - | hypothetical protein P9301_16871 1420120 - 1420440 + | hypothetical protein P9301_16881 1420499 - 1421590 + | glycosyl transferase family protein TERM 963 1422486 - 1422475 - g 86 -5.8 -5.38054 | opp_overlap 1422474 GGGTACAAACAAAAA GAGG TTGT CCTC ATAATTGTTGTTTCT TERM 964 1422735 - 1422750 + G 78 -9 -3.54029 | overlap 1422749 GCAGATAATATTGAT GCTGAG CTTG CTCAGC TTATGGTTGATACAG P9301_16891 1421697 - 1423316 + | Fe-S oxidoreductase P9301_16901 1423523 - 1423332 - | hypothetical protein P9301_16911 1424903 - 1423677 - | L,L-diaminopimelate aminotransferase TERM 965 1425164 - 1425146 - H 83 -3.2 -6.11229 | opp_overlap 1425146 ATTAAAAGAAAAAAA TCTAATTT TTT AATTTAGA TGATTTTCAAAATCC TERM 966 1426414 - 1426380 - gH 88 -7.2 -5.00616 | opp_overlap 1426380, overlap 1426382 TTGTTTGGTAAAAAA TGTTCTACATGCGATG GGA CAGGGCATGTAGAAAA TATATTAAATCAAGA TERM 967 1426412 - 1426382 - gH 79 -9.8 -2.75708 | opp_overlap 1426380, overlap 1426380 GTTTGGTAAAAAATG TTCTACATGCGATG GGA CAGGGCATGTAGAA AATATATTAAATCAA TERM 968 1426993 - 1426981 - g 100 -6.3 -6.11243 | ATGCAAGAAAAAAAA GAAGA AGA TCTTC AGCAAGTATTGAATA rne 1425201 - 1427009 + | ribonuclease E/G rnhB 1426966 - 1427583 + | ribonuclease HII and HIII P9301_16941 1428087 - 1427569 - | hypothetical protein pheA 1428139 - 1428984 + | chorismate mutase-prephenate dehydratase P9301_16961 1429918 - 1428986 - | SAM-binding motif-containing protein P9301_16971 1430575 - 1429919 - | ATP-dependent protease La rpsJ 1430952 - 1430632 - | 30S ribosomal protein S10 TERM 969 1430976 - 1430997 + r 70 -7.3 -3.81885 | opp_overlap 1430976, overlap 1430969 ATAACTTCTAGTGAA GGGCCATTT TAAT AAATGACCC TTATCTATTTATCTA TERM 970 1430997 - 1430976 - R 78 -9.5 -3.0701 | opp_overlap 1430976 1430969 ATAACTTCTAGTGAA GGGCCATTT TAAT AAATGACCC TTATCTATTTATCTA tufA 1432250 - 1431051 - | elongation factor Tu fusA 1434371 - 1432296 - | elongation factor G TERM 971 1432359 - 1432339 - G 74 -9.1 -3.14229 | opp_overlap 1432339, overlap 1432337 ATAGCTTCAGCAACA TTACGAGGA ACT TCCTCATAA TTTGCGAACTCCATT rpsG 1434939 - 1434469 - | 30S ribosomal protein S7 rpsL 1435339 - 1434965 - | 30S ribosomal protein S12 P9301_17031 1435507 - 1435397 - | hypothetical protein TERM 972 1436037 - 1436023 - g 82 -2.8 -6.06529 | CATAGATAAAAAAAA TCATCA GGA TGTTGA AAGGCTTTTATTTCA TERM 973 1436781 - 1436768 - g 74 -3.8 -5.13344 | AGAGTAATAGAAAAA GGTC GATTAG GACC GGGACAAATGTTGGC gltB 1435535 - 1440106 + | ferredoxin-dependent glutamate synthase P9301_17051 1440107 - 1440406 + | hypothetical protein P9301_17061 1441300 - 1440407 - | lipoyl synthase TERM 974 1440723 - 1440741 + g 79 -8.2 -4.12133 | GAATAGTCTCTGGTT CTTTTGAG CAA CTCAAGAG TTCTTTCATATTTGC P9301_17071 1441640 - 1442263 + | site-specific recombinase P9301_17081 1442265 - 1442477 + | hypothetical protein P9301_17091 1443382 - 1442474 - | hypothetical protein P9301_17101 1443386 - 1444144 + | hypothetical protein psaL 1444808 - 1444209 - | photosystem I reaction center protein subunit XI psaI 1444949 - 1444836 - | photosystem I subunit VIII (PsaI) P9301_17131 1445042 - 1445422 + | annexin P9301_17141 1446389 - 1445427 - | glycosyl transferase family protein TERM 975 1446471 - 1446454 - R 100 -9.9 -6.25578 | opp_overlap 1446457 ATTAAACAAAAAAAA TCACCAC AAAA GTGGTGA TTCAAATTATTTAGG psaB 1448721 - 1446493 - | photosystem I P700 chlorophyll a apoprotein A2 TERM 976 1447544 - 1447530 - G 70 -4.2 -4.99043 | overlap 1447532 CTCTTACAAAGAAAA TGGCTC CAT GAGCAA ATGCACCAACCATCA psaA 1451052 - 1448749 - | photosystem I P700 chlorophyll a apoprotein A1 TERM 977 1451005 - 1451017 + g 85 -4.9 -5.63504 | CTTAACAGGATCCTC CAAAA CCT TTTTG TTTTTTTCTCCACTT TERM 978 1451142 - 1451132 - H 71 -5.4 -4.65747 | TAATGTTCAAGAAAA CGAA TCC TTCG AAACTTTAAATATTC cobJ 1451388 - 1453190 + | bifunctional cbiH protein and precorrin-3B C17-methyltransferase TERM 979 1453529 - 1453513 - g 76 -7.3 -4.24404 | ACTTAAATCTCAAAA TTCCTCC AAG AGAGGAA ATAGTAAAGTGTTTT P9301_17181 1453287 - 1454075 + | putative imidazoleglycerol-phosphate dehydratase alr 1455460 - 1454261 - | alanine racemase mcrA 1455478 - 1456035 + | HNH endonuclease family protein prfA 1457139 - 1456045 - | peptide chain release factor 1 rpmE 1457427 - 1457167 - | 50S ribosomal protein L31 rpsI 1457851 - 1457441 - | 30S ribosomal protein S9 rplM 1458292 - 1457861 - | 50S ribosomal protein L13 truA 1459214 - 1458408 - | tRNA pseudouridine synthase A rplQ 1459603 - 1459253 - | 50S ribosomal protein L17 rpoA 1460556 - 1459618 - | DNA-directed RNA polymerase subunit alpha TERM 980 1460604 - 1460629 + r 74 -8.4 -3.38118 | opp_overlap 1460606 GGTGAGAATGGTTAA GATCTAAACG CGTCTC CGTTTAGGTC TTCTACATCCATTAT rpsK 1460999 - 1460607 - | 30S ribosomal protein S11 TERM 981 1460783 - 1460803 + g 71 -7.5 -3.53012 | overlap 1460785 1460796 1460796 GATCAAGTGCTCTTC TAGCTGCAG CTT CGGCAGCTG TTTGAGCAGCAAACG rpsM 1461409 - 1461044 - | 30S ribosomal protein S13 TERM 982 1461513 - 1461535 + r 75 -9.2 -2.69859 | overlap 1461512 1461510 AGATTTTACCTCTTC TCCTCACGAT CTG ATCGTCAGGA CTAATTTTTTTGACT adk 1462161 - 1461613 - | adenylate kinase secY 1463480 - 1462161 - | preprotein translocase subunit SecY rplO 1463968 - 1463510 - | 50S ribosomal protein L15 rpsE 1464593 - 1463973 - | 30S ribosomal protein S5 TERM 983 1464061 - 1464044 - G 77 -7.7 -3.97368 | TTCTTAATTGAGAAA GAGCTAC CATA GCAGCTC TAGCATTATTCAAAG TERM 984 1464537 - 1464560 + g 71 -7.5 -3.42458 | overlap 1464520 TTCTACGGGCGTAGC TCCAGGAAC ATTATC GTTCTTGGA TTGAATTTCTTGTTT rplR 1464978 - 1464610 - | 50S ribosomal protein L18 rplF 1465532 - 1464993 - | 50S ribosomal protein L6 TERM 985 1465380 - 1465394 + g 71 -2.9 -5.24531 | AGTAGTGGGACTTAC GATAA CAGTA TTATC TTTTTTATCAAAACT rpsH 1465946 - 1465545 - | 30S ribosomal protein S8 rplE 1466495 - 1465956 - | 50S ribosomal protein L5 TERM 986 1466289 - 1466307 + g 87 -8.8 -4.18058 | CGCGATAGCTTTTTT GGCCCTAG TTA CTAGTGCC TTTTGCCCTGTAATT rplX 1466927 - 1466571 - | 50S ribosomal protein L24 TERM 987 1466642 - 1466655 + g 86 -3.9 -5.72207 | opp_overlap 1466642 CAATAAAATATTCAA TCTTA CTTG TAAGA TTTTTTTCCTTTGAG rplN 1467293 - 1466928 - | 50S ribosomal protein L14 rpsQ 1467556 - 1467290 - | 30S ribosomal protein S17 rpmC 1467784 - 1467566 - | 50S ribosomal protein L29 rplP 1468263 - 1467781 - | 50S ribosomal protein L16 rpsC 1469006 - 1468275 - | 30S ribosomal protein S3 TERM 988 1468914 - 1468900 - G 76 -7.2 -4.20696 | opp_overlap 1468902 GTACGAATTTTAAAA TCTTCT TGG AGAAGA ATTGGATATGTTTTA rplV 1469392 - 1469006 - | 50S ribosomal protein L22 rpsS 1469667 - 1469389 - | 30S ribosomal protein S19 rplB 1470568 - 1469705 - | 50S ribosomal protein L2 TERM 989 1470254 - 1470264 + g 70 -4 -5.04987 | TACGCCTGCTGGAGC GATA ATA TATC TTTTTTCGCCATCTT rplW 1470883 - 1470581 - | 50S ribosomal protein L23 rplD 1471512 - 1470880 - | 50S ribosomal protein L4 rplC 1472162 - 1471509 - | 50S ribosomal protein L3 TERM 990 1471720 - 1471739 + g 74 -9.3 -3.1786 | overlap 1471718 CCTGGAGTTGTTCCT GCACCTG TAGATC CAGGTGC TCTATGATTTTTTGA TERM 991 1472121 - 1472135 + g 72 -5.7 -4.49958 | opp_overlap 1472120 1472121 TTTTTCGTCGAAAAG TTGGG ACATG CCCAA TTTCTTTCCTAAAAT P9301_17501 1472443 - 1472919 + | NADH dehydrogenase I subunit N hycB 1472925 - 1473932 + | Fe-S-cluster-containing hydrogenase components 2 P9301_17521 1474115 - 1474891 + | phosphatase TERM 992 1474902 - 1474923 + F 78 -5.9 -4.99645 | opp_overlap 1474902 1474907 TTTAAAGATGATAAG CTAAAGTAC AGAT GTACTATAG TTTTATTTATAAAGT TERM 993 1475065 - 1475045 - g 87 -5.4 -5.54338 | opp_overlap 1475045 1475047 GAATCAAAAGAAAAA GACAAGGC ATTAA GTCTTGTC TTAGGTCAAATAGAA recA 1475003 - 1476100 + | recombinase A P9301_17541 1476348 - 1476103 - | hypothetical protein dinG 1477826 - 1476378 - | Rad3-related DNA helicase tyrA 1477923 - 1478762 + | arogenate dehydrogenase P9301_17571 1480257 - 1478752 - | phytoene dehydrogenase and related protein TERM 994 1479401 - 1479423 + g 85 -2.8 -6.10489 | opp_overlap 1479397 1479401, overlap 1479397 GCGGTATAAATCAAA TCTTTTGCTT GGT AAATAAAAGA TTTTTTTTTCGAATT TERM 995 1479576 - 1479592 + g 70 -8 -3.05294 | opp_overlap 1479575 1479587, overlap 1479587 TAGATTTTTTAAGAT GCCACA GACCA TGTGGC TGTTGACACATTTGA P9301_17581 1480263 - 1481141 + | hypothetical protein P9301_17591 1481515 - 1481150 - | hypothetical protein TERM 996 1482549 - 1482539 - g 79 -2.6 -5.82172 | ATGAATATAAAAAAA TTAA CTC TTAA AAGTGATCAGTTAAA TERM 997 1482641 - 1482631 - g 72 -2.6 -5.42862 | overlap 1482639 ATATTGTGAAAAAAA TAAT GAA ATTA ATACTATTAATGCTA TERM 998 1482907 - 1482879 - g 77 -8.3 -3.79396 | opp_overlap 1482879 AAGAAGCATCAAGAA TCTTGTCTAAATT CAA AATTCAGTCAAGA TCTATTGAAGGCGGC thiF 1481810 - 1482955 + | molybdopterin biosynthesis protein P9301_17611 1484131 - 1482971 - | hypothetical protein TERM 999 1483628 - 1483609 - G 79 -10 -2.84229 | overlap 1483608 ATATTCTTACCAAAG CGGAAGGG GCTG CCCTTCCA GTAATAATTATTTCT P9301_17621 1484240 - 1485064 + | PP family ATPase speD 1485505 - 1485071 - | S-adenosylmethionine decarboxylase proenzyme recF 1486355 - 1485558 - | putative DNA repair and genetic recombination protein RecF P9301_17651 1487258 - 1486812 - | hypothetical protein ppc 1490231 - 1487262 - | phosphoenolpyruvate carboxylase P9301_17671 1491403 - 1490285 - | hypothetical protein P9301_17681 1492924 - 1491404 - | anthranilate synthase component I/chorismate-binding protein psaD 1493406 - 1492984 - | photosystem I protein PsaD P9301_17701 1494881 - 1493517 - | Signal transduction histidine kinase TERM 1000 1494524 - 1494514 - G 80 -5.4 -5.19212 | opp_overlap 1494514 ATTATCATCAAAAAA GGTT CAT AACC ATCTTCTTGACTAAG P9301_17711 1496149 - 1494881 - | cell division membrane protein mrp 1497222 - 1496149 - | MRP protein-like protein hemF 1497382 - 1498410 + | coproporphyrinogen III oxidase P9301_17741 1498995 - 1498438 - | hypothetical protein P9301_17751 1498898 - 1499002 + | hypothetical protein rnd 1499158 - 1499793 + | putative ribonuclease D P9301_17771 1500063 - 1499797 - | hypothetical protein P9301_17781 1501403 - 1500099 - | hypothetical protein TERM 1001 1501160 - 1501170 + g 72 -2.6 -5.50313 | overlap 1501165 CTTTTAAATATCCTA TTTT ACG AAAA TTTTTTGATTTTATG P9301_17791 1501828 - 1501649 - | hypothetical protein P9301_17801 1502447 - 1501803 - | carboxylase domain-containing protein TERM 1002 1502589 - 1502579 - R 76 -2.6 -5.9667 | opp_overlap 1502579 AAAAAGATAAAAAAA TTTA AGT TAAA ATTTCTGGTAAAAAT purM 1503623 - 1502580 - | phosphoribosylaminoimidazole synthetase cmk 1503722 - 1505254 + | bifunctional pantoate ligase/cytidylate kinase wzb 1505730 - 1505257 - | low molecular weight phosphotyrosine protein phosphatase pebB 1506524 - 1505763 - | phycoerythrobilin:ferredoxin oxidoreductase TERM 1003 1506312 - 1506322 + g 81 -4 -5.66684 | ACAAACTGCCCTTGC GAAT TGA ATTC TTTTTTTATGCGTTA pebA 1507235 - 1506525 - | dihydrobiliverdin:ferredoxin oxidoreductase TERM 1004 1506833 - 1506866 + g 87 -5.5 -5.52023 | opp_overlap 1506833 1506835 TTTTTGAATCATATA TATTCTTCATTTTAT TATT ATCAAATGCAGAATA TTTTTTCTTAATACT ho1 1507951 - 1507241 - | Heme oxygenase TERM 1005 1507892 - 1507906 + g 75 -2.8 -5.66684 | overlap 1507894 1507903 AAAGCCAGTATTTTC TGCCAT AGT ATGGGA TTTTTTTGTCCCTTC P9301_17871 1508440 - 1508009 - | hypothetical protein icd 1508651 - 1510075 + | isocitrate dehydrogenase TERM 1006 1510073 - 1510087 + T 78 -4.4 -5.45802 | overlap 1510079 ATTATCTCAAATTTC TAATTT TAA AAATTA TTTTTATTTTCAAAA P9301_17891 1511427 - 1510078 - | hypothetical protein TERM 1007 1510737 - 1510755 + g 71 -6.8 -4.1144 | AACTTGCTGCAGTTC GAAAAAGG AAT CTTTTTTC TTTAATTAATTTTTT TERM 1008 1511149 - 1511123 - G 73 -8.1 -3.39432 | opp_overlap 1511123, overlap 1511126 AAAGGACCTAAGCAA CTATTTAGAGC AATTG GCTCTAAAAAG TTATGTCCTCTAAGA TERM 1009 1511123 - 1511149 + g 75 -8.1 -3.57651 | opp_overlap 1511123 1511126 AAAGGACCTAAGCAA CTATTTAGAGC AATTG GCTCTAAAAAG TTATGTCCTCTAAGA TERM 1010 1511320 - 1511308 - G 84 -3.5 -5.80951 | AGCCAAAATAAAAAA TAAAT TAG ATTTA GATTCAAAACCTTCG galM 1512295 - 1511441 - | galactose mutarotase-like protein P9301_17911 1513204 - 1512305 - | alpha/beta superfamily hydrolase/acyltransferase TERM 1011 1512882 - 1512898 + g 86 -2.9 -6.14618 | CCACCTAATGAATTT CCAACGA CAA TTGTAGG TTTTTTTATTTTCTC kefB 1514615 - 1513248 - | CPA2 family Na+/H+ antiporter TERM 1012 1514227 - 1514204 - G 71 -8.2 -3.28416 | CACCAGCCATAGCAA CTGTAAAAGC TTGA GCTCCTACAG CTACTAATTCCTCTA glgP 1514770 - 1517316 + | phosphorylase P9301_17941 1517764 - 1517309 - | hypothetical protein TERM 1013 1517741 - 1517727 - G 74 -8.6 -3.21934 | opp_overlap 1517727, overlap 1517726 TGCTCTTTATAAAAT CTCTGA CAA TCAGAG CATTGACAGGGTTCT P9301_17951 1518128 - 1517796 - | hypothetical protein TERM 1014 1518238 - 1518252 + H 74 -8.6 -3.34088 | opp_overlap 1518231 CGAACCCACGACCTA CGGTTT AGG AAACCG TTGCTCTATCCTGCT TERM 1015 1518381 - 1518336 - H 100 -15.1 -3.15212 | opp_overlap 1518346, overlap 1518346 1518371 AAGCAGGAGAGGCAA TCGCAAGAAAGTTTTATTTTG GAAA CAAAATAAAACTTTCTTGAGG AAAGTCCGGGCTCCC TERM 1016 1518346 - 1518371 + H 95 -10.7 -4.15222 | opp_overlap 1518346 1518336 GGCAATCGCAAGAAA GTTTTATTTTG GAAA CAAAATAAAAC TTTCTTGAGGAAAGT TERM 1017 1518371 - 1518346 - H 95 -10.7 -4.20918 | opp_overlap 1518346, overlap 1518336 GGCAATCGCAAGAAA GTTTTATTTTG GAAA CAAAATAAAAC TTTCTTGAGGAAAGT TERM 1018 1518385 - 1518371 - H 76 -4.3 -5.34857 | overlap 1518336 GGAAACAAAATAAAA CTTTC TTGAG GAAAG TCCGGGCTCCCAAAT TERM 1019 1518807 - 1518791 - g 70 -4.5 -4.78848 | TCTTTAAATATAAAA TCAAAAA GAT TTTCTGA AATAATTGAAACTCA rnc 1518722 - 1519471 + | putative ribonuclease III P9301_17971 1519660 - 1519475 - | hypothetical protein rimM 1519685 - 1520224 + | 16S rRNA-processing protein glmS 1522151 - 1520256 - | D-fructose-6-phosphate amidotransferase psaC 1522480 - 1522235 - | photosystem I subunit VII acpP 1522614 - 1522853 + | acyl carrier protein TERM 1020 1523044 - 1523030 - g 76 -3.6 -5.32944 | opp_overlap 1523032, overlap 1523032 TGCAGAAGTAAAAAA TCTTCA ATC TGAAAA TTTTATTGAAGCTAA TERM 1021 1523905 - 1523928 + G 78 -6.8 -4.42062 | overlap 1523901 TAGGAGGCTCAGGAG GTATAGAAGC TGTA GCTTGTATAC TTTCTTTGACACATA fabF 1522860 - 1524104 + | 3-oxoacyl-[acyl-carrier-protein] synthase II tktA 1524149 - 1526155 + | transketolase thiC 1527543 - 1526173 - | thiamine biosynthesis protein ThiC TERM 1022 1527155 - 1527138 - G 84 -9.9 -3.50335 | overlap 1527134 1527132 CTTGATAAACAGGAA CAGTTCC TATG GGAACTG GAGATTCTTGAATAA P9301_18051 1529136 - 1527958 - | zinc metallopeptidase TERM 1023 1528341 - 1528357 + g 71 -8.1 -3.2056 | opp_overlap 1528341 1528338 GCCAATTACCAATAT TCGTAAA TAC TTTACGA TTAGTACATCTAACT P9301_18061 1529928 - 1529140 - | hypothetical protein ruvB 1530973 - 1529915 - | Holliday junction DNA helicase B TERM 1024 1530723 - 1530708 - G 74 -4 -5.14563 | TGGGCTATCAAAAAA GCAAGA GTCG TCTTAC CTAGACCAGGCTGTC smpB 1531026 - 1531520 + | SsrA-binding protein P9301_18091 1531793 - 1531548 - | hypothetical protein lysS 1533361 - 1531823 - | lysyl-tRNA synthetase P9301_18111 1534158 - 1533412 - | two-component response regulator TERM 1025 1534294 - 1534279 - R 84 -4.8 -5.75945 | AGGGTTTAAAAAAAA TTCAAA ATAA TTTGAA GATAAAATTTTTCAA P9301_18121 1534886 - 1534335 - | hypothetical protein mreC 1535605 - 1534856 - | putative rod shape-determining protein TERM 1026 1534901 - 1534917 + grH 78 -5.9 -4.77925 | overlap 1534912 ATCAATTATGTTAGG TTTTGCT AAA AGCGAAA TTTTTGCCGTTTTTT TERM 1027 1535497 - 1535484 - GRH 90 -3.9 -6.0458 | opp_overlap 1535484 ATAAAGTAAAAAAAA TCTTT ATAT AAAGA TCCTTTTGAAATCCT mreB 1536884 - 1535610 - | rod shape determining protein P9301_18151 1536793 - 1537167 + | single-strand DNA-binding protein dedA 1537823 - 1537164 - | DedA family alkaline phosphatase-like protein TERM 1028 1537400 - 1537366 - G 70 -7.2 -3.58396 | overlap 1537365 1537367 GTCCAAATCAAAAAT TTTCTTACTGGCATAA GTT CTATGCCAGCAGGAAC TGAAATTAACGTTCT TERM 1029 1537399 - 1537367 - G 80 -10.7 -2.74314 | overlap 1537366 1537365 TCCAAATCAAAAATT TTCTTACTGGCATAA GTT CTATGCCAGCAGGAA CTGAAATTAACGTTC sam1 1539244 - 1537826 - | S-adenosyl-L-homocysteine hydrolase TERM 1030 1539540 - 1539557 + G 79 -3.5 -5.60993 | opp_overlap 1539533, overlap 1539533 1539541 ACAGATTAGAAAATG TTTCTTT AGCA AAAGAAG TTTTTTTCTCAGAAG P9301_18181 1539296 - 1539733 + | ATPase or kinase P9301_18191 1540689 - 1539691 - | putative carbohydrate kinase TERM 1031 1540868 - 1540846 - g 75 -5 -5.00616 | GTCTTTGTCAAAAAA TAGTACTTCT GAA AAAAATACTA AAATTTTATTAGTTC P9301_18201 1540778 - 1541692 + | alpha/beta fold family hydrolase P9301_18211 1542711 - 1541677 - | type II alternative sigma-70 family RNA polymerase sigma factor TERM 1032 1542762 - 1542739 - R 80 -3.2 -5.96894 | overlap 1542741 1542743 AGTTAAACAAAAAAA TCCACATTTT TACA AAAATGAGAA TAAATACCTAGTCAA mgtE 1544185 - 1542779 - | Mg2+ transporter TERM 1033 1543648 - 1543695 + g 74 -7.8 -3.78962 | opp_overlap 1543655 AGCTATAAATAGTTT CAGTAAATGGGGCTCTTTTTCT CACT AAAGAAAGAGCCTCAGCTGCTG TTTGCATCTCTTTAA TERM 1034 1543688 - 1543655 - G 73 -7.5 -3.74519 | opp_overlap 1543648 AATAGTTTCAGTAAA TGGGGCTCTTTTTCT CACT AAAGAAAGAGCCTCA GCTGCTGTTTGCATC P9301_18231 1544558 - 1544229 - | hypothetical protein P9301_18241 1545258 - 1544929 - | hypothetical protein gyrB 1547222 - 1545255 - | DNA gyrase subunit B TERM 1035 1547006 - 1546993 - G 74 -6.7 -4.16182 | TTATCAGAAATTAAA GCAGA ACCA TCTGC TCGAAGAACTATTTC TERM 1036 1547165 - 1547141 - G 72 -8.7 -3.14344 | CAGGGCGTTTACGAA CAGGTTCTAAA CCC TCTAAAACCTG AATTTGCTCCGCCCC TERM 1037 1547339 - 1547327 - H 70 -3.5 -5.33921 | opp_overlap 1547327 AAATCAATGAAAAAA TTAAA CAC TTTAA TTATATAGCTAATAT miaA 1547375 - 1548274 + | tRNA delta-2-isopentenylpyrophosphate (IPP) transferase infC 1548328 - 1548900 + | translation initiation factor IF-3 P9301_18281 1548978 - 1549964 + | putative transcriptional regulator cysE 1549971 - 1550705 + | Serine acetyltransferase secA 1553545 - 1550714 - | preprotein translocase subunit SecA TERM 1038 1553347 - 1553365 + g 79 -2.4 -5.86609 | overlap 1553338 CAAAGGCTTTAGGAA GAAATTCT TCT AGGAGTTC TTTTTGTTTTTTTAA P9301_18311 1553720 - 1554175 + | GNAT family acetyltransferase P9301_18321 1554633 - 1554202 - | transcription regulator TERM 1039 1554709 - 1554725 + r 75 -9.5 -2.62983 | TCGAACTCTCGACAT TCTCCTT GGC AAGGAGA TGCTCTACCACTGAG ribH 1555288 - 1554812 - | riboflavin synthase subunit beta P9301_18341 1555535 - 1555338 - | putative photosystem II reaction center protein Z TERM 1040 1556306 - 1556296 - g 72 -2.6 -5.35815 | GATAGCAAAGAAAAA TAAT TGG ATTA CTGCTATTTACTTAT TERM 1041 1557238 - 1557214 - g 82 -7.9 -4.41241 | TAAACTCGTAGAAAA TCCTCCTCTAA GTA TTAGTGAAGGA GGCATGATCCACGAT TERM 1042 1557514 - 1557500 - g 80 -5.8 -5.00388 | GAAATTAAAAATAAA GAAAAT AAG ATTTTC CAAATAAAAAGTAGA TERM 1043 1557790 - 1557778 - g 80 -6.3 -4.91712 | opp_overlap 1557777 GTTAAGTGATAAAAA GTTTG TAG CAAAC GATATTTCTTTTGAG P9301_18351 1555676 - 1558417 + | DNA mismatch repair protein cobH 1559072 - 1558449 - | putative precorrin-8X methylmutase CobH holA 1559131 - 1560132 + | DNA polymerase III subunit delta lysC 1560172 - 1561932 + | aspartate kinase uvrB 1563980 - 1561941 - | excinuclease ABC subunit B TERM 1044 1562198 - 1562209 + g 74 -3 -5.47218 | opp_overlap 1562198 CTAGAAAAGATAATA TTGA ATTT TCAA TTTTTTTGCCTGCAG TERM 1045 1563739 - 1563751 + g 71 -7.7 -3.46081 | opp_overlap 1563733 1563730, overlap 1563734 TCAACAGCATTTTTT GGGAA AAA TTCCC TTAATTCATTACATA P9301_18401 1564786 - 1564010 - | hypothetical protein TERM 1046 1564814 - 1564839 + H 72 -4.9 -5.02476 | gap 1, overlap 1564817 TTTATTACCCGATTG TGACATTGTTTT AGT AAAACAGTG-CA TTTTTTAAAAAATAT TERM 1047 1565746 - 1565756 + G 71 -6.8 -3.99678 | opp_overlap 1565746 1565745 TTTTAAAAGAAATAT CTGC AAA GCAG TTTAGTTCTAAAAAT mesJ 1564872 - 1565882 + | ATPase P9301_18421 1567864 - 1565879 - | metallo-beta-lactamase superfamily hydrolase TERM 1048 1567954 - 1567940 - R 78 -8.6 -3.86372 | opp_overlap 1567940 TCAAGTTAAATATAA TCCCTA TTA TAGGGA TTTCAGGATAAAAGA TERM 1049 1567940 - 1567954 + r 75 -8.6 -3.57144 | opp_overlap 1567940 TCAAGTTAAATATAA TCCCTA TTA TAGGGA TTTCAGGATAAAAGA dapA 1568848 - 1567946 - | dihydrodipicolinate synthase TERM 1050 1568784 - 1568764 - G 74 -9.8 -2.57274 | overlap 1568763 1568761 GTTCATAATCAACAT CTCCATTC TCAGT GAATGGAG TAACCATTGCAGTCA asd 1569876 - 1568845 - | aspartate semialdehyde dehydrogenase TERM 1051 1569600 - 1569612 + g 76 -3.4 -5.44721 | opp_overlap 1569600 CATTTTGATCAATAA TGGT AGACA ACCA TTTTTTTGAAATACT tig 1570001 - 1571434 + | trigger factor P9301_18461 1571500 - 1572144 + | Clp protease proteolytic subunit clpX 1572250 - 1573617 + | ATP-dependent protease ATP-binding subunit dnaX 1573675 - 1575435 + | DNA polymerase, gamma and tau subunits P9301_18491 1576738 - 1575437 - | glycosyl transferase family protein TERM 1052 1576769 - 1576785 + r 79 -5.2 -5.61824 | ATTACTGAACTTTCA TTGAGA CAATA TCTCAA TTTTTTTCAGTTTTA P9301_18501 1578304 - 1576766 - | putative amidase enhancer TERM 1053 1577966 - 1577996 + g 80 -6.3 -4.76041 | opp_overlap 1577965 1577967, overlap 1577967 ATAACTAGCAAAAGG ACCAAAAACAATT CTTTC GATTGTTTTTGGA TTTTTGATGGGTATA TERM 1054 1577967 - 1577995 + g 80 -9.8 -3.44902 | opp_overlap 1577967 1577965, overlap 1577966 TAACTAGCAAAAGGA CCAAAAACAATT CTTTC GATTGTTTTTGG ATTTTTGATGGGTAT TERM 1055 1577995 - 1577967 - G 74 -9.1 -3.16033 | opp_overlap 1577966 1577967, overlap 1577965 TAACTAGCAAAAGGA CCAAAAACAAT TCTTTCG ATTGTTTTTGG ATTTTTGATGGGTAT rpmI 1578396 - 1578593 + | 50S ribosomal protein L35 rplT 1578622 - 1578969 + | 50S ribosomal protein L20 P9301_18531 1579008 - 1579565 + | putative photosystem I assembly related protein Ycf37 thiG 1579568 - 1580362 + | thiazole synthase TERM 1056 1580861 - 1580847 - g 71 -8.6 -2.84459 | opp_overlap 1580847 AAGAGCAGCACCATA CTCGAT GAA ATCGAG TTTTACCAAAAGATA TERM 1057 1580847 - 1580861 + G 82 -8.6 -4.07885 | opp_overlap 1580847 AAGAGCAGCACCATA CTCGAT GAA ATCGAG TTTTACCAAAAGATA TERM 1058 1581169 - 1581153 - g 72 -3.7 -5.22006 | opp_overlap 1581152 TTACTACAACAAAAA TGATCTT GTA AGGATCA CTGATCTACATCAAG sqdB 1580533 - 1581726 + | sulfolipid (UDP-sulfoquinovose) biosynthesis protein P9301_18561 1581766 - 1582887 + | SqdX P9301_18571 1583151 - 1582903 - | hypothetical protein TERM 1059 1582991 - 1583001 + g 70 -4 -5.00616 | TTTTCAGGCCTTTTT TTCT TTG AGAA TTTTTTACCAAAAGG TERM 1060 1583185 - 1583173 - R 74 -4.9 -5.10077 | opp_overlap 1583173 AAATACCCCAAAAAA TTTGA TGC TCAAA TATCCTAATAAAAAA TERM 1061 1583222 - 1583212 - R 79 -4 -5.63857 | AAAAATTTAAAAAAA TTCT ATA AGAA AATATTAAATTTTTA gcvP 1586190 - 1583281 - | glycine dehydrogenase TERM 1062 1584473 - 1584447 - G 70 -8 -3.10498 | opp_overlap 1584448, overlap 1584446 1584454 TAATTGCCAATAAAC CTGCAAACTCTC CTT GAGAGCCTGCAT TTGGTTGAAAAGAAA TERM 1063 1584448 - 1584472 + g 72 -7.1 -3.90112 | opp_overlap 1584447 1584446 1584454 AATTGCCAATAAACC TGCAAACTCTC CTT GAGAGCCTGCA TTTGGTTGAAAAGAA TERM 1064 1584466 - 1584454 - G 73 -7.7 -3.66497 | opp_overlap 1584448, overlap 1584447 1584446 CAATAAACCTGCAAA CTCTC CTT GAGAG CCTGCATTTGGTTGA TERM 1065 1585251 - 1585261 + g 71 -5.4 -4.56887 | overlap 1585257 TTGTTTGCAATGCTA GTCT TAG AGAC TTTTCTCCATTTTTA gcvH 1586625 - 1586236 - | putative glycine cleavage H-protein P9301_18601 1587920 - 1586628 - | cystathionine beta-lyase family aluminum resistance protein P9301_18611 1588637 - 1587939 - | hypothetical protein TERM 1066 1588813 - 1588794 - g 72 -5 -4.8543 | opp_overlap 1588797, overlap 1588797 GAACTCTCAGAAAAA TTACTGGA ACCT TCCAGTCA TTCAAAAAGATATCC ole1 1588713 - 1589651 + | Fatty acid desaturase, type 1 rplI 1589672 - 1590127 + | 50S ribosomal protein L9 TERM 1067 1590713 - 1590703 - g 76 -5.4 -5.11063 | ATCAGTCAAGAAAAA CCTT CAA AAGG TCTGACTCAAGCAGC dnaB 1590187 - 1591569 + | DnaB replicative helicase gidA 1591582 - 1593564 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA ubiC 1593631 - 1594173 + | 4-hydroxybenzoate synthetase (chorismate lyase) P9301_18671 1594716 - 1594153 - | viral RNA helicase P9301_18681 1595328 - 1594801 - | hypothetical protein P9301_18691 1595414 - 1595833 + | hypothetical protein P9301_18701 1595858 - 1597171 + | ATP-dependent DNA ligase P9301_18711 1597288 - 1597440 + | hypothetical protein P9301_18721 1598041 - 1597445 - | hypothetical protein TERM 1068 1597629 - 1597609 - G 73 -9.1 -2.81784 | overlap 1597603 1597608 AGCAATAAAGAACAG TTCCTGGAA TTA TTCCAAGAA GACCAAGAGCAAAAT TERM 1069 1597784 - 1597802 + g 95 -9 -5.00616 | opp_overlap 1597783 1597772 1597794 TAATTTTGGATAACG GCTAAAAA GAT TTTTTAGC TTTTTTGCAAAAAAA TERM 1070 1597834 - 1597818 - G 71 -2.3 -5.40072 | overlap 1597819 TTTTTTGCAAAAAAA CTCTTTG ATA CAAAAAA AGCAACTGATGCTCC valS 1600800 - 1598044 - | valyl-tRNA synthetase TERM 1071 1599139 - 1599115 - G 74 -9.5 -2.52193 | opp_overlap 1599118, overlap 1599118 1599120 ACCATATTTATCAAT TAATAGTATTG GAT CAATACCATTA CCTGAACTTTTACTC P9301_18741 1601284 - 1600898 - | hypothetical protein mazG 1601425 - 1602279 + | nucleoside triphosphate pyrophosphohydrolase TERM 1072 1602752 - 1602767 + G 70 -6.2 -4.27796 | TATTTTTATAGATTG TTCAGA TCCC TCTGAA TTTTCAAATTTATTA speE 1602276 - 1603127 + | spermidine synthase speB 1603129 - 1604010 + | arginase TERM 1073 1604515 - 1604499 - g 71 -3 -5.1361 | overlap 1604505 ACAAACTTTAAAAAA GCCAAA GTACT TTTAGC ACTACAGGGAAAAAA gcvT 1604061 - 1605173 + | glycine cleavage system aminomethyltransferase T aspS 1605229 - 1607025 + | aspartyl-tRNA synthetase pyrG 1607101 - 1608711 + | CTP synthetase nrdG 1608738 - 1609409 + | putative organic radical activating protein TERM 1074 1609561 - 1609551 - g 74 -4 -5.27923 | CAACGTCATAAAAAA GAAT TAA ATTC TGCATCAATAATTGC P9301_18821 1609416 - 1610090 + | ATPase TERM 1075 1610128 - 1610117 - g 70 -4.4 -4.87786 | TTAATTCTAGAAAAA TGGA TAGA TCCA GCACTGATTACGCAT P9301_18831 1610087 - 1611403 + | putative p-aminobenzoate synthetase P9301_18841 1611400 - 1612227 + | aminotransferases class-IV cysG 1613003 - 1612200 - | putative uroporphyrin-III C-methyltransferase TERM 1076 1612376 - 1612389 + g 70 -3.9 -5.0538 | TATCTAAATTCTCAA TCAAA CATT TTTGA TTTTTTAAAGTAGCC TERM 1077 1613723 - 1613698 - g 75 -2.7 -5.67711 | opp_overlap 1613698, overlap 1613701 1613711 CAAATAAAACAAAAA CTATTTTAAAA AACC CTTTAAAAGAG CTATTTACAGTTTTC TERM 1078 1613723 - 1613711 - g 70 -4.1 -5.07053 | opp_overlap 1613698, overlap 1613701 1613698 AACTATTTTAAAAAA CCCTT TAA AAGAG CTATTTACAGTTTTC P9301_18861 1613061 - 1614329 + | major facilitator superfamily multidrug-efflux transporter TERM 1079 1615881 - 1615906 + G 89 -9.1 -4.41609 | opp_overlap 1615877 1615875 1615864 ATCAAAAGTTATTAG TTTCTCCCTCA TCTA TGAGAGAGAAA TTTATATTTCTGATA TERM 1080 1616133 - 1616150 + G 100 -7.1 -5.40004 | overlap 1616145 GCATTATTGGCCACT TTCTTGA ACAC TCAAGAA TTTTTTGGTTTAGTA ppk 1614329 - 1616413 + | polyphosphate kinase P9301_18881 1616615 - 1617634 + | type II alternative sigma-70 family RNA polymerase sigma factor TERM 1081 1618036 - 1618054 + G 87 -4.6 -5.75342 | opp_overlap 1618035, overlap 1618038 1618053 TTATTAGGAAAAAGC TTTAACTC AAA GAGTTGGA TTTTTTTTGAACAAA TERM 1082 1618053 - 1618076 + G 79 -8.4 -4.03413 | overlap 1618036 TAACTCAAAGAGTTG GATTTTTTTT GAAC AAAAAAAATC TTTATATGGAACCAT P9301_18891 1617838 - 1618281 + | hypothetical protein aroG 1619341 - 1618274 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1083 1618369 - 1618381 + g 75 -4.9 -5.04222 | CAAACTGGAGATCTT CTTTT TTT AAAAG TTTTTGATTTCCTTC TERM 1084 1621316 - 1621306 - g 74 -5.4 -4.77216 | AAGAATATTTAAAAA GCAA TAT TTGC CTGCTAGAAAAAATG acnB 1619439 - 1622012 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase eriC 1622022 - 1623380 + | putative chloride channel TERM 1085 1623415 - 1623402 - T 78 -6.7 -4.86621 | opp_overlap 1623402, overlap 1623385 ATTTTCAATCAAAAA CAGCA GTTT TGCTG TTATAGACAAATACT purU 1624245 - 1623391 - | formyltetrahydrofolate deformylase TERM 1086 1624194 - 1624175 - G 78 -9.4 -3.29211 | TAATTTGAAATCCAA CTTGTAAG TAAA CTTACAAG GCCAGGACGATCGGG TERM 1087 1624570 - 1624554 - g 74 -5.3 -4.84017 | AAGTTCCTACAAAAA TTTAATT ATG AATTAAA TATCGAAAAACCATT TERM 1088 1624824 - 1624812 - g 85 -4.9 -5.63645 | CTAAAACATAAAAAA GTAAA TTA TTTAC AAGGAGAAATAATAA P9301_18941 1624293 - 1625375 + | NAD binding site:D-amino acid oxidase P9301_18951 1627279 - 1625372 - | molecular chaperone DnaK TERM 1089 1625687 - 1625703 + g 100 -6.7 -5.72118 | opp_overlap 1625674, overlap 1625674 AACAAGTGTTTCAGC TTGATTT TTT AAATCAA TTTTTTCTCTTTTTT TERM 1090 1626217 - 1626231 + g 70 -4.3 -4.8236 | GATTAACGGTTTGAT TTGGT TCTTT ACCAA TTATTTTTTTAACTA aroE 1627395 - 1628255 + | shikimate 5-dehydrogenase rpsF 1628358 - 1628819 + | 30S ribosomal protein S6 argG 1630037 - 1628823 - | argininosuccinate synthase P9301_18991 1630290 - 1630604 + | hypothetical protein TERM 1091 1630834 - 1630853 + G 82 -5 -5.33848 | overlap 1630821 ACCCCAACAATGGGT GGGATTTT TATG ATAATCCC TTTTTTAATTCTGCT mraY 1630588 - 1631664 + | putative phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 1092 1631725 - 1631746 + T 95 -11.7 -3.53811 | opp_overlap 1631716 1631713, overlap 1631714 AAGTGACTGCTCAAG TCTTGATGC AATG GCATCAAGA TTTGAAGAAACTGCC P9301_19011 1633263 - 1631854 - | sucrose phosphate synthase uvrA 1636369 - 1633466 - | excinuclease ABC subunit A recN 1638103 - 1636424 - | DNA repair protein RecN, ABC transporter TERM 1093 1637545 - 1637556 + g 71 -3 -5.18357 | TTTCTTCTTGATTCC TAGA AAAT TCTA TTTTTTCATCCATTA TERM 1094 1638439 - 1638409 - g 78 -9.1 -3.44794 | gap 1, opp_overlap 1638408 1638409 AATTTATTAGTAGAA CTTGGGCCTGCATT TGTT AAGGCAGGCC-AAG CTTTATCAACAAGAC TERM 1095 1638409 - 1638439 + G 73 -9.1 -2.91276 | gap 1, opp_overlap 1638409, overlap 1638408 AATTTATTAGTAGAA CTTGGGCCTGCATT TGTT AAGGCAGGCC-AAG CTTTATCAACAAGAC P9301_19041 1638172 - 1640028 + | hypothetical protein TERM 1096 1640051 - 1640061 + G 79 -2.6 -5.83211 | opp_overlap 1640045, overlap 1640045 1640055 TTAGCAAAATTTTAA TATT TAA AATA TTTTTTATTTTAGTA P9301_19051 1640029 - 1640601 + | hypothetical protein thrC 1640608 - 1641711 + | threonine synthase