TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.678549 %AT, 1479481 nt, 8519 terms. Intergenic: 0.747999 %AT, H2T: 137977 nt, 1119 terms; T2T: 47976 nt, 812 terms; H2H: 65800 nt, 1122 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|78778385|ref|NC_007577.1| Prochlorococcus marinus str. MIT 9312, complete genome (length 1709204) TERM 1 409 - 399 - g 71 -5.4 -4.62471 | TGGAACTGTTAAAAA TAGC GGT GCTA TTACGATACCTTCAA TERM 2 818 - 787 - g 100 -14 -4.70515 | opp_overlap 793 CATATTGAAAATAAA GATAAATCACCTTC AATT GAAGATGATTTATC AGTAACTATTCCAAC PMT9312_0001 205 - 1362 + | DNA polymerase III subunit beta PMT9312_0002 1364 - 2068 + | hypothetical protein TERM 3 4355 - 4345 - g 70 -4 -5.1167 | opp_overlap 4337 4345, overlap 4337 AATCCAAGATAAAAA TATC TGT GATA TTAGTGTTGAGGAAT PMT9312_0003 2072 - 4411 + | phosphoribosylformylglycinamidine synthase II TERM 4 4586 - 4568 - g 78 -9 -3.39327 | CTGGTATAGCTACAA TGGAAAAT ACT ATTTTCCA TATACATAAGGCTAA PMT9312_0004 4459 - 5919 + | amidophosphoribosyltransferase PMT9312_0005 8357 - 5916 - | DNA topoisomerase IV subunit A PMT9312_0006 9298 - 8435 - | TPR repeat-containing protein PMT9312_0007 10247 - 9303 - | hypothetical protein PMT9312_0008 10395 - 11129 + | hypothetical protein nusB 11133 - 11759 + | transcription antitermination protein NusB TERM 5 12702 - 12690 - g 76 -3.3 -5.32565 | opp_overlap 12691, overlap 12691 TAATCAATCAAAAAA TGCTG ATC CAGCT GCTGTAGTTTTTGAT PMT9312_0010 11818 - 13110 + | signal recognition particle-docking protein FtsY TERM 6 13208 - 13195 - g 70 -3.9 -5.05712 | ACAAATAATCAAAAA GAAAA ATTA TTTTC AAACAAATTTATTCA PMT9312_0011 13177 - 14520 + | serine phosphatase TERM 7 15451 - 15437 - g 82 -2.8 -5.93809 | GCCGCAGAAAAAAAA TCCAGA TGT TCCAGA ATTGATAAGAGGTAA PMT9312_0012 14583 - 15962 + | argininosuccinate lyase TERM 8 16028 - 16040 + F 72 -3.4 -5.29385 | opp_overlap 16010 16028, overlap 16020 GGTAATGTTATAAAA CTAC CTTAA GTAG TTTTTTAATTAGGTT PMT9312_0013 16075 - 16743 + | RNA-binding region RNP-1 (RNA recognition motif) PMT9312_0014 17744 - 16740 - | tRNA-dihydrouridine synthase A PMT9312_0015 17768 - 18262 + | methionine sulfoxide reductase B TERM 9 18355 - 18339 - g 90 -8.1 -4.86033 | AAATTTTTAGAAAAA TGATTGA AAA TCAATCA GACAATATTGATATT PMT9312_0016 18338 - 19057 + | heat shock protein GrpE PMT9312_0017 19087 - 20211 + | DnaJ-class molecular chaperone PMT9312_0018 20211 - 20441 + | hypothetical protein PMT9312_0019 20431 - 21348 + | GTPase EngC PMT9312_0020 21664 - 21314 - | hypothetical protein PMT9312_0021 22575 - 21682 - | UDP-N-acetylmuramate dehydrogenase PMT9312_0022 23993 - 22584 - | UDP-N-acetylmuramate--L-alanine ligase TERM 10 23412 - 23398 - G 73 -4.3 -5.04325 | opp_overlap 23404 23407 CCTAAATCAGAAAAA TGATC GCAAT GATCA AAATCAATGTTATTA TERM 11 23579 - 23560 - G 75 -8 -3.68569 | overlap 23563 CCAGTTATTGAAGAA GAATTATG CGTA CATAATTC AAGAAGTGTCGATAG TERM 12 24557 - 24547 - g 77 -4 -5.42259 | GTAGGGGCAAAAAAA GTTA TCT TAAC TGCTCCGGGTAAAGG PMT9312_0023 24187 - 25209 + | glyceraldehyde 3-phosphate dehydrogenase(NADP+)(phosphorylating) PMT9312_0024 26196 - 25210 - | thiamine-phosphate kinase TERM 13 25359 - 25335 - G 72 -8.6 -3.03412 | overlap 25334 CAAGTTTAGATAAAT TCTTTGCCCA TTTTT TGGGCAATGA GAAAACTAATTCGTA PMT9312_0025 27280 - 26189 - | cyclophilin-type peptidyl-prolyl cis-trans isomerase TERM 14 26391 - 26372 - G 71 -2.2 -5.51353 | gap 1 TAAAAAGAAGAAAAA TTG-CGATG AGC CATCATCAA CTGCGGTATTTGAAT TERM 15 26526 - 26546 + g 74 -6.1 -4.43208 | overlap 26527 26530 GGAATTCTAATTTCG AGAGGAACG TGA CGTTCTTCA TTTGTTTCAGGATCT TERM 16 26527 - 26545 + g 78 -9.6 -3.25202 | overlap 26526 26530 GAATTCTAATTTCGA GAGGAACG TGA CGTTCTTC ATTTGTTTCAGGATC TERM 17 26530 - 26542 + g 73 -7.7 -3.75884 | overlap 26527 26526 TTCTAATTTCGAGAG GAACG TGA CGTTC TTCATTTGTTTCAGG TERM 18 26721 - 26733 + g 76 -5.5 -5.1167 | overlap 26722 ACAATAGCTTTCATG TCTCC TTT GGAGG TTTTTATATTGACTT PMT9312_0026 27324 - 27884 + | elongation factor P TERM 19 27945 - 27916 - g 83 -9.5 -3.77831 | gap 1, opp_overlap 27916 TCATGAAGACTTAAA TCGCTTAATAGAGA AAA TCTCTA-CAAGCGA TATTCAAGAATTCTC TERM 20 27973 - 27956 - g 86 -9.9 -3.7104 | opp_overlap 27955 27954 AGCGATATTCAAGAA TTCTCCC TAGA GGGAGAA GATTTTAAACTTGAA PMT9312_0027 27884 - 28387 + | biotin carboxyl carrier protein pdxA 29395 - 28364 - | 4-hydroxythreonine-4-phosphate dehydrogenase PMT9312_0029 30297 - 29419 - | hypothetical protein TERM 21 30252 - 30262 + g 72 -2.6 -5.34309 | opp_overlap 30252 AACCACATCCAAAGA TAAA GAA TTTA TTTTTATTTCCTAGT PMT9312_0030 30330 - 30560 + | transcription factor TFIID (or TatA-b)-like PMT9312_0031 30962 - 30561 - | HNH nuclease PMT9312_0032 31516 - 31106 - | type II secretion system protein-like PMT9312_0033 32085 - 31573 - | hypothetical protein TERM 22 31902 - 31916 + g 72 -7.2 -3.8062 | TAACTGTTCCAATTC CGATTT CTA AAATCG TTCTTGTGCCGATTG TERM 23 32007 - 32018 + g 74 -5.8 -4.59773 | CCGCAAGAGGAGCAG CAGG AATA CCTG TTTTTAGAGCTAAAG PMT9312_0034 32220 - 32417 + | hypothetical protein PMT9312_0035 33582 - 32419 - | soluble hydrogenase small subunit TERM 24 33979 - 33998 + G 79 -8 -4.07687 | opp_overlap 33979 ATAAAAGAGGATACA TCAGAAAT ATGC ATTTCTGA TTTTGCAAAAGAAGT TERM 25 33998 - 33979 - g 70 -8 -3.0641 | opp_overlap 33979 ATAAAAGAGGATACA TCAGAAAT ATGC ATTTCTGA TTTTGCAAAAGAAGT cbiD 33667 - 34755 + | cobalt-precorrin-6A synthase TERM 26 35510 - 35527 + G 76 -8.5 -3.39948 | overlap 35505 TTGCTTTGTCAGGAG GAGTTGA TTCG TCAACTC TTGCGTTTCTTCTCA guaA 34810 - 36396 + | bifunctional GMP synthase/glutamine amidotransferase protein PMT9312_0038 38065 - 36581 - | TPR repeat-containing protein PMT9312_0039 38344 - 39057 + | hypothetical protein PMT9312_0040 39139 - 39747 + | hypothetical protein PMT9312_0041 40011 - 41801 + | putative penicillin-binding protein PMT9312_0042 42348 - 41824 - | putative reductase PMT9312_0043 44147 - 42366 - | flavoprotein TERM 27 42603 - 42621 + g 77 -7.6 -3.98859 | overlap 42597 GGGTTTAGTGAATCT TTTTAAAG GTT CTTTAAAA TCTTTTTCACTTAAA PMT9312_0044 45939 - 44164 - | flavoprotein TERM 28 44394 - 44419 + g 71 -8.5 -2.96991 | overlap 44391 CAGGGGCAAATCTTT TTAGAAAATGT CTAA ACATTTTCTGA TAGTTGTCTTCTCGC TERM 29 46565 - 46578 + G 75 -8.1 -3.64283 | opp_overlap 46563 46565 TCATCTGGCAAAACA GGTCC ATGT GGACC TTGTTCAGAACTTTA TERM 30 46578 - 46565 - g 75 -8.1 -3.64716 | opp_overlap 46565, overlap 46563 TCATCTGGCAAAACA GGTCC ATGT GGACC TTGTTCAGAACTTTA TERM 31 47186 - 47210 + G 76 -7.3 -4.208 | opp_overlap 47185 47190, overlap 47200 47201 AAATTGCTAGATGAG TTAATTTCTTC AGG GCAGAAATTAA TTTCTGGTTTTAAAG alaS 46058 - 48718 + | alanyl-tRNA synthetase PMT9312_0046 50649 - 48703 - | arginine decarboxylase TERM 32 49136 - 49115 - G 100 -11.7 -3.83154 | opp_overlap 49126, overlap 49123 GAATCACAAGTTAAA TCTGCAAAG TTGC CTTTGCAGA AAGGCTCCTCTAAGT PMT9312_0047 50772 - 51230 + | nucleoside diphosphate kinase PMT9312_0048 52343 - 51234 - | putative thiamine biosynthesis oxidoreductase TERM 33 51888 - 51867 - G 82 -10.9 -2.75382 | opp_overlap 51860 51863, overlap 51864 GACTCCATGCAAGGA GCATGCTCT CTCA AGAGCACGC ATCAGTCTTCTTCGG TERM 34 52781 - 52770 - g 70 -4.4 -4.84673 | opp_overlap 52770 TGAAATAATAGAAAA GGAT AAAG ATCC TTATACAAAAAAAAT gatB 52423 - 53895 + | aspartyl/glutamyl-tRNA amidotransferase subunit B PMT9312_0050 54517 - 53900 - | dephospho-CoA kinase TERM 35 55389 - 55373 - g 73 -8.1 -3.54902 | TCATCCAAGAAGGAA TTGACAT TGT ATGTCAA AACTTAGCAAAAAAT argJ 54595 - 55833 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein PMT9312_0052 56667 - 56002 - | hypothetical protein TERM 36 56129 - 56087 - G 80 -9.2 -3.73783 | overlap 56090 GAGGCAATTGAACAA TAAGCAGACCAGCCCGTCAT TCG ACGAGGATCTGATCTGCCTA AATCGTCTACAGCTT TERM 37 56126 - 56090 - G 82 -8.7 -3.99494 | overlap 56087 GCAATTGAACAATAA GCAGACCAGCCCGTCAT TCG ACGAGGATCTGATCTGC CTAAATCGTCTACAG TERM 38 57099 - 57112 + G 76 -5.3 -5.03747 | opp_overlap 57099 AGAATTGGTGATAGA GGTTT TAAT AAACC TTTTTTAAAAAGTTT PMT9312_0053 56799 - 57782 + | aldo/keto reductase TERM 39 58108 - 58087 - f 86 -6.5 -5.09895 | opp_overlap 58086, overlap 58089 TAGTTATTTAAAAAA GTGGAGTCC TTCC AGACTCCGC GTATCATTTGGTTGA PMT9312_0054 58409 - 59533 + | putative RNA methylase PMT9312_0055 59921 - 59535 - | hypothetical protein TERM 40 59743 - 59726 - G 79 -3.5 -5.69068 | GAAAAAGATAAAAAA TAATATG GATG CACATTA GAACTAATAATAGTA PMT9312_0056 60384 - 59923 - | hypothetical protein PMT9312_0057 60573 - 60710 + | hypothetical protein PMT9312_0058 60790 - 61152 + | hypothetical protein TERM 41 62219 - 62235 + G 75 -8.1 -3.64703 | opp_overlap 62219 TCTAGCTTGAGAGAA CTTGATA GGG TATCAAG TTTGAATAAAGAAGA TERM 42 62235 - 62219 - g 73 -8.1 -3.49475 | opp_overlap 62219 TCTAGCTTGAGAGAA CTTGATA GGG TATCAAG TTTGAATAAAGAAGA TERM 43 64493 - 64467 - g 70 -7.4 -3.69618 | opp_overlap 64466 64471, overlap 64465 64468 TTCAACTTGAAAATA CTAATTCTCCTT TGG AAGGAGGATTAA CTTTAGTTGCACATC TERM 44 64492 - 64468 - g 71 -8.7 -2.81289 | opp_overlap 64466 64471, overlap 64467 64465 TCAACTTGAAAATAC TAATTCTCCTT TGG AAGGAGGATTA ACTTTAGTTGCACAT TERM 45 64471 - 64489 + G 71 -8.2 -3.33399 | opp_overlap 64468 64467 64465, overlap 64466 ACTTGAAAATACTAA TTCTCCTT TGG AAGGAGGA TTAACTTTAGTTGCA PMT9312_0059 61229 - 64819 + | condensin subunit Smc PMT9312_0060 64865 - 65914 + | hypothetical protein PMT9312_0061 67183 - 65918 - | hypothetical protein TERM 46 66943 - 66958 + g 76 -6.2 -4.58213 | opp_overlap 66942, overlap 66945 GCTTTATTAATAATT TCCAAA AACT TTTGGA TTTTGTAATTAATTC TERM 47 68795 - 68774 - g 74 -9.5 -2.73007 | gap 1, opp_overlap 68777, overlap 68773 AATAGGGCTTTAAAT GAATGCGCGG TAA CCG-GCATTC CTACAACAATTAACT PMT9312_0062 67553 - 68899 + | acetyl-CoA carboxylase biotin carboxylase subunit PMT9312_0063 69232 - 68918 - | hypothetical protein PMT9312_0064 69314 - 69499 + | hypothetical protein TERM 48 69747 - 69771 + G 74 -7.9 -3.85891 | ATTATTTTTTCAAGG CTGGAGATTAG ATC CTATTCTTCAG TTTGGTCAGTTTTTG TERM 49 70400 - 70385 - g 81 -4 -5.54192 | gap 1, overlap 70387 ATCAAGTCAAAAAAA CT-CGAG AGT CTCGGAG AGTCAGCTCTTCAGC PMT9312_0065 69580 - 70506 + | hypothetical protein PMT9312_0066 70782 - 70507 - | high light inducible protein-like PMT9312_0067 72773 - 70791 - | ABC transporter ATP-binding protein TERM 50 71242 - 71252 + g 91 -5.4 -5.84381 | ATGAATAATAATTCC CCAA TTT TTGG TTTTTTTATTACTCC PMT9312_0068 73094 - 72816 - | hypothetical protein PMT9312_0069 73483 - 73142 - | HIT (histidine triad) family protein TERM 51 73442 - 73455 + g 70 -3.9 -5.09173 | CTTATCGCAGGGGAT TTCTT CATT AAGAA TTTTTTGAAATATTG def 74093 - 73488 - | peptide deformylase TERM 52 74542 - 74525 - g 74 -7.1 -3.96379 | overlap 74523 AAGTCAAAACAAATA TCTTGAA TCAG TTCAAGA ACCGCGGCAGCTATC TERM 53 74632 - 74651 + G 74 -5.2 -4.87803 | opp_overlap 74632 ACGGTATTTGTGAAA TAAATAAT AGTG ATTATTTA TTTTCTTTAAACCTA TERM 54 74865 - 74852 - g 72 -2.4 -5.33921 | opp_overlap 74852 AAAGCAACTAAAAAA GTTC TCAAAC GAAC TGGTTAATACCAAAA PMT9312_0071 74175 - 76100 + | esterase/lipase/thioesterase family protein PMT9312_0072 77350 - 76097 - | SufS subfamily cysteine desulfurase PMT9312_0073 78567 - 77350 - | ABC transporter, membrane component PMT9312_0074 79354 - 78569 - | FeS assembly ATPase SufC PMT9312_0075 80818 - 79376 - | cysteine desulfurase activator complex subunit SufB TERM 55 80535 - 80545 + g 74 -4 -5.27335 | opp_overlap 80535 ACTTCATCCAAACTA GAAA TCT TTTC TTTTTGTTTGGGAGC PMT9312_0076 80915 - 81268 + | hypothetical protein PMT9312_0077 81539 - 82639 + | hypothetical protein PMT9312_0078 82652 - 82822 + | membrane protein TERM 56 83353 - 83369 + G 73 -8.1 -3.53444 | opp_overlap 83356, overlap 83356 CTACCAAATTTTACT GAATATG GAG CATATTC TTTCGGGGAAACTAC PMT9312_0079 82855 - 84492 + | phosphoglucomutase TERM 57 84677 - 84693 + G 71 -3.1 -5.252 | TGCCATATTAAACGA TAAGATT AGT AATTTTA TTTTTTCTGGCCCTC PMT9312_0080 84525 - 85814 + | recombination factor protein RarA PMT9312_0081 86467 - 85811 - | putative 4'-phosphopantetheinyl transferase family protein PMT9312_0082 86467 - 86934 + | putative bacterioferritin comigratory (BCP) protein PMT9312_0083 87621 - 86938 - | putative transcriptional acitvator, Baf PMT9312_0084 88362 - 87637 - | phosphoadenosine phosphosulfate reductase TERM 58 88704 - 88694 - g 70 -4 -5.01732 | AACTTTTTTAAAAAA TTGT TTA ACAA AGATTTCCTTCAAAG PMT9312_0085 88437 - 89651 + | putative NADH dehydrogenase, transport associated PMT9312_0086 89701 - 91509 + | DASS family sodium/sulfate transporter TERM 59 91750 - 91765 + G 90 -9 -4.70046 | ATTTAAATTTCTTTG GCCAAG TATT CTTGGC TTTTATGCTTTTATC TERM 60 92037 - 92056 + G 81 -4.3 -5.40464 | opp_overlap 92037, overlap 92038 ATCTTTCACAGCATA TCTGCAT ATAACA ATGCAGG TTTTTCTTTATGGTC TERM 61 92065 - 92098 + G 72 -3.3 -5.31059 | gap 1, opp_overlap 92077 92095, overlap 92067 92095 ATGCAGGTTTTTCTT TATGGTCTAATAGTCT CCA AGACTAT-AGAACAAA TTTTTTGGTTAATAT PMT9312_0087 91515 - 92918 + | Trk family sodium transporter TERM 62 93623 - 93610 - g 71 -5.3 -4.62783 | TAGTTATGGGAAAAA CTGTA GACT TACAG AAATTGCCTCAGAAT PMT9312_0088 92937 - 93641 + | VIC family potassium channel protein PMT9312_0089 93950 - 93648 - | hypothetical protein PMT9312_0090 94076 - 94414 + | hypothetical protein PMT9312_0091 94450 - 94680 + | hypothetical protein PMT9312_0092 94834 - 94658 - | hypothetical protein TERM 63 94780 - 94769 - G 81 -4.4 -5.45726 | overlap 94776 TAGAGTCCAAAAAAA CCAA TAAC TTGG AATTGCAAGAGCTGC TERM 64 95240 - 95223 - g 86 -7.1 -4.81863 | AAATTGAGAATAAAA TGAAATC ATTA GATTTCA AAAAGAATTCCGATG TERM 65 95857 - 95884 + G 77 -9.2 -3.22774 | AAGTCCTGCTTTTAA TTTTCCAGAGTG TCCT CGCTCAGGAAAA TTAGTGCTAAATATC PMT9312_0093 94907 - 96517 + | ABC transporter ATP-binding protein PMT9312_0094 97951 - 96830 - | PDZ/DHR/GLGF PMT9312_0095 98127 - 98390 + | hypothetical protein TERM 66 98508 - 98530 + G 87 -11.4 -3.00003 | GTTAAAGAAGATCCT GTTAGGCTTG AAC TAAGCCTAAC TCCTTCTTATGGTAA PMT9312_0096 98490 - 98801 + | hypothetical protein PMT9312_0097 98867 - 99013 + | high light inducible protein-like PMT9312_0098 99317 - 99018 - | hypothetical protein TERM 67 99257 - 99234 - G 70 -4.6 -4.75404 | AAAGCTTATTAAAAA GTTAATCCCA AAAA TAGGAATAAC TATAAGTATGATTAA PMT9312_0099 100239 - 99319 - | serum resistance locus BrkB-like protein PMT9312_0100 101129 - 100329 - | inositol monophosphate family protein PMT9312_0101 102559 - 101126 - | RND family outer membrane efflux protein-like PMT9312_0102 103964 - 102552 - | putative Fe-S oxidoreductase TERM 68 103118 - 103142 + g 77 -7.9 -4.07437 | TCCCAAGCCTAATTT GTAGAGAGGCT TGA ATTCTCTCTAC TTGTTTAATAGTTTT PMT9312_0103 104182 - 104919 + | hypothetical protein TERM 69 105049 - 105029 - g 77 -8.5 -3.57792 | TGAGTTACCTGCAAA TTTAAAAGT GCT ACTTTTAAA TAGAAACACAAGCAA PMT9312_0104 104919 - 106586 + | L-aspartate oxidase PMT9312_0105 107511 - 106576 - | thioredoxin domain-containing protein TERM 70 107570 - 107591 + G 79 -3.7 -5.59502 | overlap 107572 TCTTGGCATGAGAGT TATAAACGG AATG CCGTTTGAA TTTTTTAATTTTTTA PMT9312_0106 107562 - 108977 + | hypothetical protein petL 109075 - 108983 - | cytochrome b6f complex subunit PetL PMT9312_0107 109526 - 109140 - | hypothetical protein TERM 71 109563 - 109547 - R 75 -3.1 -5.5074 | opp_overlap 109548 109550, overlap 109548 GAAGTTAATAAAAAA CTATATT ACT AATATAA TCTTTGTGACAGCCA PMT9312_0108 110742 - 109588 - | hypothetical protein TERM 72 110038 - 110054 + g 71 -2.3 -5.4477 | overlap 110040 TCTTAAACAATGCTG TTCATAA AAA TTATGCA TTTTTTTGAGGATTT PMT9312_0109 111410 - 110760 - | ribD/ribG-like TERM 73 110834 - 110850 + g 90 -8.1 -4.8743 | TTTCCCATAGTCTTT TGAGATT AAA AATCTCA TTTGTTTGTTTTGGA TERM 74 110885 - 110911 + g 70 -3.8 -5.09685 | overlap 110886 110888 110891 TCCATGTATATCTAC CTCCAATAATTC GTG GAATTATTGTAA TTTTTATATCTGTTA TERM 75 110886 - 110910 + g 70 -7.3 -3.64184 | overlap 110885 110888 110891 CCATGTATATCTACC TCCAATAATTC GTG GAATTATTGTA ATTTTTATATCTGTT TERM 76 110888 - 110908 + g 84 -9.9 -3.37568 | overlap 110886 110885 110891 ATGTATATCTACCTC CAATAATTC GTG GAATTATTG TAATTTTTATATCTG PMT9312_0110 112333 - 111407 - | 6-pyruvoyl tetrahydropterin synthase TERM 77 111665 - 111639 - G 78 -9.6 -3.18788 | opp_overlap 111639, overlap 111637 111636 TTATTGAGAAAAGTA TGATCTAGTTGT TCA ACAACCAAATCA TTAATTATCTCTTGG aroK 112384 - 112941 + | shikimate kinase PMT9312_1809 113195 - 112938 - | hypothetical protein PMT9312_0112 113194 - 113904 + | POLO box duplicated region-like PMT9312_0113 114616 - 113891 - | putative glutathione S-transferase TERM 78 114381 - 114392 + g 85 -3 -6.06529 | TCTTCAGGAAAGAGT TGAT TGTT ATCA TTTTTTTTATCTATA PMT9312_0114 114671 - 114880 + | hypothetical protein PMT9312_0115 114880 - 115272 + | ribosome-binding factor A PMT9312_0116 115259 - 116056 + | putative uroporphyrinogen III synthase PMT9312_0117 116519 - 116049 - | putative integral membrane protein PMT9312_0118 118022 - 116523 - | zeta-carotene desaturase TERM 79 117708 - 117675 - G 83 -10.5 -3.07575 | opp_overlap 117672, overlap 117681 AAAAGGTGCACCTAA TGGAAATCTGAAATC TAAA GATTTCAAATTGCCA CCATTATTTATGAAC PMT9312_0119 118078 - 118470 + | hypothetical protein PMT9312_0120 118477 - 118905 + | hypothetical protein TERM 80 119025 - 119003 - gf 72 -7.8 -3.30124 | opp_overlap 119000, overlap 119004 GGTCATTCTGTAGAA GCTTTACCAA TTG TTGGTAAAGG AACTCATTACGAAAA TERM 81 119024 - 119004 - gf 86 -11.3 -2.57931 | opp_overlap 119000, overlap 119003 GTCATTCTGTAGAAG CTTTACCAA TTG TTGGTAAAG GAACTCATTACGAAA TERM 82 119698 - 119687 - gf 81 -4.4 -5.49579 | CTAGAAAAAATAAAA GAGA AGTA TCTC TTGAAATTTCAATAT PMT9312_0121 118907 - 120118 + | hypothetical protein PMT9312_0122 120090 - 120371 + | hypothetical protein PMT9312_0123 121248 - 120322 - | putative cell division inhibitor PMT9312_0124 121385 - 121621 + | hypothetical protein PMT9312_0125 122309 - 121632 - | putative heat shock protein DnaJ PMT9312_0126 123294 - 122326 - | cysteine synthase PMT9312_0127 123446 - 123718 + | hypothetical protein TERM 83 124163 - 124181 + G 76 -5.4 -5.093 | opp_overlap 124179, overlap 124179 TAACTATTGCATGCG TTCTTATT AGT AATAGGAA TTTTATTCTTTTAGA PMT9312_0128 123727 - 124401 + | ATPase TERM 84 124549 - 124567 + T 88 -6 -5.4492 | opp_overlap 124549, overlap 124555 CAAAAGTCATGCAAA GTCACC GAAAAAA GGTGAC TTTTTTATGTCTATG PMT9312_0129 125468 - 125109 - | signal peptide binding domain-containing protein PMT9312_0130 125872 - 126654 + | two component transcriptional regulator PMT9312_0131 127617 - 126658 - | DNA polymerase III subunit delta' PMT9312_0132 128252 - 127614 - | thymidylate kinase PMT9312_0133 130559 - 128253 - | putative P-type ATPase transporter for copper TERM 85 130272 - 130255 - G 74 -8.5 -3.27779 | opp_overlap 130254, overlap 130253 130263 AGTAAAAGTAATAGA GCAAAAG TTAG CTTTTGC CATTGATTATTCCAT TERM 86 130805 - 130791 - g 81 -10 -3.02947 | CATCTACTATAGAGA TGGGCT GGC AGCCCA AAATAATGGAGATTA PMT9312_0134 130669 - 131190 + | photosystem I assembly protein Ycf3 PMT9312_0135 132545 - 131196 - | DNA repair protein RadA PMT9312_0136 132653 - 133399 + | two component transcriptional regulator PMT9312_0137 133400 - 134818 + | putative glycerol-3-phosphate acyltransferase PlsX PMT9312_0138 134874 - 135881 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 87 136160 - 136148 - g 76 -6.3 -4.58773 | opp_overlap 136147 TGCACTAAAGGAAAA TGGTT ATA AACCA AATTATGTTGCTGGG TERM 88 136348 - 136319 - g 83 -10.3 -2.98823 | opp_overlap 136309 136319 136323, overlap 136323 TGGTTTTGATAGAGA TCAACTTGATTTA TTAG TAAATCAAATTGA TGATGTTGTAATAGC TERM 89 136502 - 136520 + G 71 -8.2 -3.34894 | opp_overlap 136499, overlap 136499 136503 ATTCATGAATGATCC TTCAGCAA AAT TTGCTGAG TATTTAAAAAAGATT TERM 90 136503 - 136519 + G 74 -9.5 -2.60615 | opp_overlap 136499, overlap 136502 136499 TTCATGAATGATCCT TCAGCAA AAT TTGCTGA GTATTTAAAAAAGAT PMT9312_0139 135900 - 136796 + | malonyl CoA-acyl carrier protein transacylase PMT9312_0140 136802 - 137422 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase PMT9312_0141 138080 - 137427 - | hypothetical protein TERM 91 137935 - 137954 + g 74 -2.2 -5.64274 | overlap 137946 TCAACAATCAAGTTG TTAGATAA GTCT TTATCAAA TTTTTTTATAAATAA PMT9312_0142 138341 - 138090 - | putative Ycf34 PMT9312_0143 138356 - 139576 + | poly A polymerase family protein PMT9312_0144 139636 - 140055 + | RNA-binding region RNP-1 (RNA recognition motif) PMT9312_0145 140964 - 140056 - | squalene and phytoene synthase TERM 92 140092 - 140081 - G 74 -3 -5.42514 | CGAGAAATTAAAAAA GATA TTGG TATC TCAAAGGCTTTAACT TERM 93 140217 - 140184 - G 71 -7.5 -3.53563 | gap 1, opp_overlap 140192 140194 ATATTCCTCTGTAAA GACGTAACGATGTCCA AAC TGGCCATC-TTGCGTC AGAGGAGAGCCACTT TERM 94 140290 - 140304 + g 70 -4.3 -4.78326 | TAATTGAAACTTCAT CAATG CTTTC CATTG TTTATTTATTTCGCC TERM 95 140553 - 140568 + g 74 -6.2 -4.45544 | CAACAGTCCCTGCCA CTCTAT AACA ATAGAG TTTTAATTCATCAAA PMT9312_0146 142399 - 141002 - | three-step phytoene desaturase / zeta-carotene desaturase PMT9312_0147 142490 - 142837 + | NADH dehydrogenase I subunit M PMT9312_0148 142909 - 143460 + | hypothetical protein PMT9312_0149 144410 - 143451 - | putative Rubisco transcriptional regulator PMT9312_0150 144493 - 145221 + | hypothetical protein TERM 96 146045 - 146078 + G 79 -8.1 -3.96148 | ACCGATCTCTGCACT TATCCATGCAGCTAC GATG GTTGCCGCAGGGATA TTTCTAGTGGCGAGG TERM 97 146939 - 146951 + G 73 -7.7 -3.6761 | overlap 146936 AGCTGGGATCGTTAT TGCCT ATC AGGCA TATTTCTTGAAAAAA PMT9312_0151 145257 - 147278 + | NAD(P)H-quinone oxidoreductase subunit F TERM 98 148697 - 148717 + G 74 -6.9 -4.17516 | CCTCTTTAGCTGCTA TAGGTGTAA TAC TTACTCCTA TTTATCTACTTTCAA TERM 99 148763 - 148745 - g 77 -7.6 -3.97834 | CAATGTTACGAGAAA TTTTCTTT GGT AAAGAAAA TCCTAAATTAACCGA PMT9312_0152 147400 - 149004 + | NAD(P)H-quinone oxidoreductase subunit 4 PMT9312_0153 149128 - 149949 + | hypothetical protein TERM 100 150512 - 150495 - g 74 -8.5 -3.35088 | opp_overlap 150494 AAATGGTCGAATTAA GGCTTTT CAAG AAAAGCC ATCTATAGATAAAGC PMT9312_0154 149998 - 151176 + | putative sugar-phosphate nucleotidyl transferase PMT9312_0155 152050 - 151160 - | methylenetetrahydrofolate reductase PMT9312_0156 152128 - 152406 + | LuxR family transcriptional regulator PMT9312_0157 153117 - 152620 - | hypothetical protein ppnK 154029 - 153118 - | inorganic polyphosphate/ATP-NAD kinase PMT9312_0159 154362 - 154039 - | NADH dehydrogenase subunit K PMT9312_0160 154977 - 154378 - | NADH dehydrogenase subunit J PMT9312_0161 155616 - 154990 - | NADH dehydrogenase subunit I TERM 101 155600 - 155634 + g 80 -5.2 -5.30339 | opp_overlap 155609, overlap 155604 TAGCTATTTATTTGT TGAAGGAAATTTTTCA TTT TGAAGAATTTACTTTG TTTTTGTATTTTAGT TERM 102 155604 - 155630 + g 80 -6 -5.0707 | opp_overlap 155609, overlap 155600 TATTTATTTGTTGAA GGAAATTTTTCA TTT TGAAGAATTTAC TTTGTTTTTGTATTT PMT9312_0162 156803 - 155685 - | NADH dehydrogenase subunit H PMT9312_0163 158024 - 156879 - | methylcitrate synthase TERM 103 157870 - 157888 + g 100 -7.5 -5.89827 | opp_overlap 157870 CAAATCAATAGATAA GCAGTTT CTAAA AAACTGC TTTTTTTTGATAATT TERM 104 157888 - 157870 - G 75 -8.2 -3.74516 | opp_overlap 157870 CAAATCAATAGATAA GCAGTTTC TAA AAAACTGC TTTTTTTTGATAATT TERM 105 158097 - 158131 + r 86 -6.6 -5.10497 | opp_overlap 158098, overlap 158098 158100 AACCACAAGTTATTA ACCTCAAAAAAATTTA TTT TGATTTTTTTTGAGGC TTTTTTGAATAACTT TERM 106 158098 - 158130 + r 84 -10.1 -3.65214 | opp_overlap 158098, overlap 158097 158100 ACCACAAGTTATTAA CCTCAAAAAAATTTA TTT TGATTTTTTTTGAGG CTTTTTTGAATAACT TERM 107 158130 - 158098 - R 70 -7.9 -3.23979 | opp_overlap 158097 158098 158100 ACCACAAGTTATTAA CCTCAAAAAAATTTA TTT TGATTTTTTTTGAGG CTTTTTTGAATAACT TERM 108 158100 - 158118 + r 78 -3.2 -5.77853 | opp_overlap 158098, overlap 158098 158097 CACAAGTTATTAACC TCAAAAAA ATT TATTTTGA TTTTTTTTGAGGCTT PMT9312_0164 159609 - 158149 - | hypothetical protein TERM 109 158566 - 158576 + g 75 -2.6 -5.58454 | CAAAGTGTATTTATT TAAA TCT TTTA TTTTTTTCATATCAC TERM 110 159607 - 159617 + g 74 -4 -5.21459 | TACTACTTTAAGTTT CATT CTC AATG TTTATTTTTATTTTT PMT9312_0165 159693 - 160049 + | rhodanese-like protein PMT9312_0166 161294 - 160050 - | tryptophan synthase subunit beta TERM 111 161224 - 161237 + g 73 -8.1 -3.55122 | opp_overlap 161220, overlap 161220 TATTTTCCAAATCTT CCCTC TTTG GAGGG TTGATTTAAATCGTC PMT9312_0167 161342 - 161653 + | translation initiation factor 1 (eIF-1/SUI1) PMT9312_0168 161684 - 162319 + | adenylylsulfate kinase PMT9312_0169 162871 - 162335 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 112 163304 - 163285 - g 85 -8 -4.35693 | AAACGCATAAAAGAA TTAGCTTT GAAC AAAGCTAA AATCAAATATGAAGT TERM 113 163454 - 163444 - g 77 -4 -5.38326 | opp_overlap 163444, overlap 163438 TTAAGCAAAGAAAAA CTAA TTG TTAG CTTTGCTCCGTATAC TERM 114 163613 - 163582 - g 74 -3.8 -5.27335 | overlap 163583 GCTGCTAAAGAAAAA GGATTTAACGTCGT GAAA ACGAAATTAAATCA AGCTCCTTTTTATTT TERM 115 163612 - 163583 - g 70 -7.3 -3.75678 | overlap 163582 CTGCTAAAGAAAAAG GATTTAACGTCGT GAAA ACGAAATTAAATC AAGCTCCTTTTTATT PMT9312_0170 162961 - 163662 + | Mg-protoporphyrin IX methyl transferase PMT9312_0171 164392 - 163664 - | two component LuxR family transcriptional regulator TERM 116 164832 - 164805 - g 87 -5.6 -5.66868 | overlap 164830 AATCAACTAAAAAAA GAGGGATTTATG GTTA CAGAAATCACTC CAGAAAGAGATGGGT PMT9312_0172 164451 - 165596 + | nifS-like aminotransferase class-V PMT9312_0173 166513 - 165611 - | methyltransferase TERM 117 166224 - 166204 - G 77 -9.9 -2.73468 | opp_overlap 166209, overlap 166209 CAAGATCTGCAATTA CAAAAGAAA CTT TTTCTTTTG GTTCAAAATCCGCAA PMT9312_0174 166552 - 167739 + | NAD(P)H-quinone oxidoreductase subunit H PMT9312_0175 167749 - 168201 + | hypothetical protein PMT9312_0176 169426 - 168212 - | putative O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase) TERM 118 168300 - 168311 + g 71 -3 -5.19261 | TCATGTTTAGGCCAA CTTT GAGA AAAG TTTTTTAATAAATTT PMT9312_0177 170376 - 169411 - | putative O-succinylbenzoate synthase TERM 119 169778 - 169766 - G 73 -7.7 -3.71627 | opp_overlap 169765 TCATCAACAGAAAGA GGTTG TTC CAACC AATCTATATTTTTGT PMT9312_0178 171290 - 170373 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 120 171434 - 171462 + G 87 -11.2 -3.43676 | opp_overlap 171431 TTTTTAAAAGATTTA TTTTCCACTTTC GATAA GAAGGTGGAAAA TTCTGGATTAGTAAG TERM 121 171941 - 171921 - g 77 -9.9 -2.64878 | opp_overlap 171917, overlap 171918 171917 171925 TTAGAAATCAAGTTA TTAATTCTG GCT CAGAATTAA AAAAATTATCTAGTT TERM 122 172207 - 172237 + G 95 -9.2 -5.13722 | opp_overlap 172205 172207 172210, overlap 172210 AAGAAATAGTAAAGA TATTTTTTTTGGAG CAT CTCCAGAAAAATTA TTTTCTTTTACTAAA TERM 123 172210 - 172234 + G 100 -10.9 -4.64486 | opp_overlap 172207 172205 172210, overlap 172207 AAATAGTAAAGATAT TTTTTTTGGAG CAT CTCCAGAAAAA TTATTTTCTTTTACT PMT9312_0179 171392 - 172804 + | isochorismate synthase PMT9312_0180 173720 - 172797 - | glutathione synthetase TERM 124 173245 - 173255 + g 78 -6.8 -4.44915 | CCTTGTCCACCTTTT CCTC CAA GAGG TTTTATGACTACTTC PMT9312_0181 173980 - 173726 - | glutaredoxin GrxC TERM 125 173891 - 173903 + g 95 -4.9 -6.11243 | overlap 173881 ATCTATTTTATATTC TGTAA AAT TTACA TTTTTTTTCTTAAGT TERM 126 174713 - 174701 - g 81 -9.1 -3.93061 | overlap 174696 ATGGCAAAAGGCAAA CCAGC TTT GCTGG GGTAGAGGTTATGCC prfB 174115 - 175179 + | peptide chain release factor 2 PMT9312_0183 175183 - 175365 + | hypothetical protein PMT9312_0184 175372 - 175911 + | hypothetical protein TERM 127 175941 - 175931 - g 85 -2.6 -6.15259 | overlap 175935 CAATGGAAAAAAAAA TAAA CTA TTTA GAAAATAGAAAAGAA TERM 128 175949 - 175935 - g 86 -5.8 -5.45056 | overlap 175931 GGAAAAAAAAATAAA CTATTT AGA AAATAG AAAAGAATCATACAA PMT9312_0185 175918 - 176328 + | diacylglycerol kinase PMT9312_0186 176341 - 176937 + | anthranilate synthase, component II PMT9312_0187 176958 - 177683 + | hypothetical protein PMT9312_0188 178789 - 177680 - | histidinol phosphate aminotransferase argS 180603 - 178789 - | arginyl-tRNA synthetase TERM 129 180349 - 180365 + g 71 -2.3 -5.48028 | TATTTCTAGACTCTT GCATA ATTTTGA TATGC TTTTATTTTTATTTA PMT9312_0190 181497 - 180631 - | nicotinate-nucleotide pyrophosphorylase:quinolinate phosphoriobsyl transferase trmE 182962 - 181580 - | tRNA modification GTPase TrmE TERM 130 182448 - 182460 + g 91 -3.5 -6.11392 | TTTATAAGGTCATTT TTAAT ATC ATTAA TTTTTTTCTTTATTT PMT9312_0192 183029 - 183472 + | hypothetical protein PMT9312_0193 185800 - 183491 - | guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase TERM 131 185026 - 185046 + g 84 -5.5 -5.4251 | opp_overlap 185026 AGTTTTCCTTCATAA GATTCAAAG TTA CTTTTAATC TTTTTTCTCTATCAC TERM 132 185080 - 185092 + g 74 -6.3 -4.40333 | TTTTAACAGCGATTT GATCT TTA AGATC TTTATATTCTTTAGG TERM 133 185622 - 185633 + g 71 -3 -5.20222 | TTTACTAAAAGGTTT TGAT TCTC ATCA TTTTCTTTATTTGAT TERM 134 186923 - 186913 - g 79 -2.6 -5.81412 | overlap 186917 TGCATCGAAAAAAAA TAAA TCT TTTA AAAAGAACAATAATA TERM 135 186929 - 186917 - g 82 -4.9 -5.33985 | overlap 186913 TCGAAAAAAAATAAA TCTTT TAA AAAGA ACAATAATATGCAAA PMT9312_0194 185855 - 187453 + | ATPase PMT9312_0195 188405 - 187446 - | putative pseudouridylate synthase specific to ribosomal large subunit TERM 136 187537 - 187569 + g 71 -8.5 -2.91452 | opp_overlap 187538 TTTATTGGATGTATA AGTCCAAGCTTTATA GCG TGTAAAGCTTGGCCA TCTAATTGACATGGT TERM 137 187568 - 187538 - G 78 -9.8 -3.36327 | opp_overlap 187537 TTATTGGATGTATAA GTCCAAGCTTTATA GCG TGTAAAGCTTGGCC ATCTAATTGACATGG rbgA 189268 - 188396 - | ribosomal biogenesis GTPase pgk 189482 - 190690 + | phosphoglycerate kinase PMT9312_0198 191426 - 190692 - | hypothetical protein PMT9312_0199 191459 - 192550 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase PMT9312_0200 193653 - 192529 - | L-threonine O-3-phosphate decarboxylase PMT9312_0201 194839 - 193670 - | dihydroorotate dehydrogenase 2 PMT9312_0202 195565 - 194846 - | RNase HI TERM 138 195604 - 195568 - R 80 -9.7 -3.36175 | opp_overlap 195567 AATCGCTATTCATAA TTTTTGAAGCCGATA TAAAGGT TATCGGCTTAAAAAA ATGTACTCTTACTTA rplL 196008 - 195613 - | 50S ribosomal protein L7/L12 rplJ 196564 - 196037 - | 50S ribosomal protein L10 rplA 197463 - 196756 - | 50S ribosomal protein L1 rplK 197955 - 197530 - | 50S ribosomal protein L11 TERM 139 197885 - 197913 + g 71 -8.1 -3.29043 | opp_overlap 197876, overlap 197886 197888 197894 CCTAAAGCTGGCCCT ACAGGCGGAGCAG GAT TTGCTTTGCCTGC TTGTAGAGCAAGCTT TERM 140 197886 - 197912 + g 86 -11.6 -2.57211 | opp_overlap 197876, overlap 197885 197888 197894 CTAAAGCTGGCCCTA CAGGCGGAGCAG GAT TTGCTTTGCCTG CTTGTAGAGCAAGCT nusG 198634 - 198023 - | transcription antitermination protein NusG secE 198934 - 198692 - | preprotein translocase subunit SecE PMT9312_0209 201752 - 198996 - | ATPase TERM 141 199214 - 199230 + g 71 -3 -5.17054 | opp_overlap 199226 199229, overlap 199224 199229 TAGTGATATTTATTT TCTGTT CAAGA AGCAGA TTTTTTAAATCTTCT PMT9312_0210 202018 - 203310 + | enolase PMT9312_0211 204983 - 203316 - | putative kinase TERM 142 204590 - 204607 + g 87 -9.9 -3.81447 | CCTGAGCTAGTGATG CTGATCC AACA GGATCAG TTATTATAAAATCTA PMT9312_0212 205297 - 204983 - | hypothetical protein TERM 143 205956 - 205972 + G 72 -5.1 -4.84359 | GGAGTAAGTTATTGT GCTACAT GTG ATGGAGC TTTTTATAAAAATAG PMT9312_0213 205551 - 206507 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase PMT9312_0214 206812 - 206531 - | hypothetical protein PMT9312_0215 207813 - 206815 - | putative sodium-dependent bicarbonate transporter PMT9312_0216 209472 - 207820 - | putative sulfate transporter PMT9312_0217 209697 - 210698 + | delta-aminolevulinic acid dehydratase PMT9312_0218 210762 - 211148 + | glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein TERM 144 211151 - 211176 + F 79 -6.3 -4.83615 | opp_overlap 211171 ATCGAATGTTTGATT CTTTTTTTTTG TATG CAAGAGAAAAG TTTTTCTAAAAAATC TERM 145 212474 - 212490 + G 84 -10.9 -3.04144 | opp_overlap 212473 212472 TTGTTAGATGAAATT GGATCTG GTA CAGATCC TCTTGAAGGTAGCGC TERM 146 212851 - 212830 - g 93 -8.8 -4.80178 | opp_overlap 212829 212830 GATCAAGCAACAAAA TTCTGCAG AAGCCG CTGCAGAA CTTATTGCTAGGACT TERM 147 212830 - 212851 + G 71 -8.8 -2.83073 | opp_overlap 212830, overlap 212829 GATCAAGCAACAAAA TTCTGCAG AAGCCG CTGCAGAA CTTATTGCTAGGACT TERM 148 213305 - 213318 + G 87 -5.3 -5.69262 | opp_overlap 213305, overlap 213312 AAAATTGAGATCAAG TCTTC AAGA GAAGA TTTTTCTTTTTCTAA PMT9312_0219 211163 - 213574 + | MutS2 family protein TERM 149 213591 - 213577 - f 75 -4.4 -5.18371 | GTGGATAAAATAAAA TTTAAA ATA TTTAAA AACCATTGTTTAACT obgE 213614 - 214597 + | GTPase ObgE PMT9312_0221 214683 - 214865 + | hypothetical protein TERM 150 214873 - 214919 + T 77 -9 -3.45366 | opp_overlap 214888, overlap 214877 214888 ATTACTAAAAGAATT TAAGAAATAAAAAAAGGGCTTT TTT AGAGCCCTTTTTTTATGGATTA TTCATTAATTAAGAA TERM 151 214877 - 214915 + T 76 -9.8 -2.90896 | opp_overlap 214888, overlap 214873 214888 CTAAAAGAATTTAAG AAATAAAAAAAGGGCTTT TTT AGAGCCCTTTTTTTATGG ATTATTCATTAATTA TERM 152 214904 - 214888 - T 100 -6.5 -6.08342 | opp_overlap 214877 214873 214888 TAAGAAATAAAAAAA GGGCTTT TTT AGAGCCC TTTTTTTATGGATTA TERM 153 214888 - 214904 + T 100 -8.7 -5.66684 | opp_overlap 214888, overlap 214877 214873 TAAGAAATAAAAAAA GGGCTTT TTT AGAGCCC TTTTTTTATGGATTA PMT9312_0222 215156 - 214938 - | hypothetical protein PMT9312_0223 216224 - 215280 - | glutathione S-transferase TERM 154 216396 - 216372 - g 71 -8.7 -2.83715 | opp_overlap 216375, overlap 216377 TTGAGTATGAGTACA TCATAGGTAAT CCT ATTGCCTATGA AAAAGGCTGTAGATA PMT9312_0224 216248 - 217153 + | aspartoacylase TERM 155 217520 - 217534 + F 77 -5.7 -4.87803 | overlap 217512 TCTAGAATTTCGAAG CGGAA TTAAT TTCCG TTTTATTTACACGTC TERM 156 218279 - 218263 - g 100 -10.9 -4.18421 | TAATCAGAGAAACAA CTGAGAC AGA GTCTCAG AACTATGGTTACAAG PMT9312_0225 217578 - 218660 + | photosystem q(b) protein TERM 157 218684 - 218700 + F 100 -10.8 -6.25578 | opp_overlap 218684 TTCTTAATTTTACAA GCCCCC TTTTT GGGGGC TTTTTTTTGTTTAAT TERM 158 218700 - 218684 - f 86 -10.8 -3.36492 | opp_overlap 218684 TTCTTAATTTTACAA GCCCCC TTTTT GGGGGC TTTTTTTTGTTTAAT TERM 159 219285 - 219273 - g 74 -6.3 -4.46112 | TCTGATGTAAATAAA GAGAA GAT TTCTC TCAATAAAATAGATT PMT9312_0226 218769 - 219866 + | chorismate synthase PMT9312_0227 220527 - 219901 - | 2-keto-3-deoxy-phosphogluconate aldolase TERM 160 219928 - 219940 + g 90 -4.9 -5.8096 | opp_overlap 219928 GAGCCATTCAAATAT TTTTG GAT CAAAA TTTTTATTTTTTATA TERM 161 220512 - 220481 - G 100 -6.1 -6.25242 | gap 1, opp_overlap 220481 220478 220471, overlap 220471 ATAAGTAAAAAAAAA GATTCTTTTTTCAG TAACT CCG-AAAAAGAATC TTCTTTATTATTCAT PMT9312_0228 222399 - 220546 - | cell division protein FtsH2 TERM 162 221643 - 221665 + g 79 -10 -2.91582 | CAATGCAAGGAGCAT TCTTTTTGGC TTG GTCAAAAAGA TCTCTAACTCGGCTA PMT9312_0229 223621 - 222446 - | ATP-sulfurylase TERM 163 223262 - 223279 + g 72 -3.5 -5.28176 | TATAGAACTAACTTC TAAAACA GCTA TGTTTTG TTTTTTATAGGTAAG TERM 164 223676 - 223660 - R 100 -7.9 -6.79027 | opp_overlap 223661, overlap 223661 TTTAAAAAAAAAAAA GGGGGGT TTA ACCCCCT TTTTTGCTTAAACTA TERM 165 223675 - 223661 - R 100 -11.4 -4.63756 | opp_overlap 223661, overlap 223660 TTAAAAAAAAAAAAG GGGGGT TTA ACCCCC TTTTTTGCTTAAACT TERM 166 223661 - 223675 + r 100 -11.4 -5.27477 | opp_overlap 223660 223661 TTAAAAAAAAAAAAG GGGGGT TTA ACCCCC TTTTTTGCTTAAACT TERM 167 223682 - 223701 + r 70 -5.1 -4.67982 | TTAACCCCCTTTTTT GCTTAAA CTAGGA TTTAAGC TTTTCTTCCGTAAAG PMT9312_0230 224490 - 223696 - | photosystem II manganese-stabilizing protein PMT9312_0231 225965 - 224709 - | phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase PMT9312_0232 226176 - 225955 - | hypothetical protein PMT9312_0233 226394 - 226594 + | hypothetical protein PMT9312_0234 226606 - 226947 + | hypothetical protein pyrB 227969 - 226950 - | aspartate carbamoyltransferase catalytic subunit TERM 168 228004 - 228017 + H 70 -3.8 -5.10656 | GATTATTTGAATTTT GGTG TTCTGT CACC TTTTATTCTTTTACT gatC 228747 - 229040 + | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 169 229086 - 229061 - T 72 -6.4 -4.36914 | opp_overlap 229056 229061 229081 TTGCTGCCTATAAAA GTTTTATTAA CTATCT TTAATAAAAC TTTTTTTATTTTATA TERM 170 229061 - 229086 + T 100 -6.4 -6.14618 | opp_overlap 229061, overlap 229056 229081 TTGCTGCCTATAAAA GTTTTATTAA CTATCT TTAATAAAAC TTTTTTTATTTTATA PMT9312_0238 229842 - 229042 - | beta-carotene hydroxylase PMT9312_0239 230395 - 230844 + | hypothetical protein TERM 171 233161 - 233185 + G 80 -5.9 -5.09173 | TCAAATATCAAATGC TTATGAAAATT ATG AATTTTCAAAA TTTTTTCAAATCTTA ileS 230966 - 233872 + | isoleucyl-tRNA synthetase PMT9312_0241 234497 - 233874 - | hypothetical protein TERM 172 234668 - 234652 - g 71 -6.7 -3.97947 | TCCACTTAGTAGAAA TTTCAAT GAA ATTGAAA GAATACCTGCTTTGA trmB 234620 - 235249 + | tRNA (guanine-N(7))-methyltransferase PMT9312_0243 236609 - 235257 - | phosphoglucosamine mutase TERM 173 236481 - 236496 + g 70 -6.2 -4.26938 | AATTCTTGTATCTCT TCCAAT TAAT ATTGGA TTATTATTTTCTAAA PMT9312_0244 236746 - 237291 + | thioredoxin-like protein TxlA thyX 237931 - 237299 - | FAD-dependent thymidylate synthase TERM 174 237871 - 237885 + g 77 -4.3 -5.28176 | GATTACTAACTCTTG CAATG TAAGC CATTG TTTTTTCTGCATCAG dcd 238526 - 237933 - | deoxycytidine triphosphate deaminase TERM 175 238114 - 238127 + g 73 -8.1 -3.42884 | overlap 238111 AGGTGGCCTTCCCAT CCTGC TTCT GCAGG TGTTGTGTTAACTAT PMT9312_0247 239112 - 238531 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 176 238991 - 238976 - G 77 -7.6 -4.07466 | overlap 238967 238965 ATTATAGAAGAATAA CTTCCT CTAT AGGAAG ACTGATAGATTTGGA TERM 177 239155 - 239174 + H 71 -5.8 -4.4078 | overlap 239129 ATAATTTGAATATAT TTACACTG CATA TAGTGTAA TTTTACTTAAAAAAA PMT9312_0248 239315 - 240049 + | Crp/FNR family transcriptional regulator TERM 178 240391 - 240356 - g 71 -7.6 -3.48877 | overlap 240348 240355 240357 GATGAGAGTAAAAAG GCGCTTCTTCCTCTCC AGGA AGAAAGGAAGAAGCTT GAAGATAAAATTAAT TERM 179 240390 - 240357 - g 82 -11.1 -2.68603 | overlap 240348 240356 240355 ATGAGAGTAAAAAGG CGCTTCTTCCTCTCC AGGA AGAAAGGAAGAAGCT TGAAGATAAAATTAA PMT9312_0249 240089 - 241048 + | hypothetical protein PMT9312_0250 241055 - 241492 + | hypothetical protein PMT9312_0251 241730 - 241473 - | hypothetical protein PMT9312_0252 242336 - 241734 - | peptidyl-tRNA hydrolase PMT9312_0253 242679 - 242479 - | photosystem II reaction center protein H psbN 242760 - 242912 + | photosystem II reaction center protein N TERM 180 242965 - 242953 - f 80 -4.9 -5.36364 | CCAAAAATACAAAAA GTAAA CCT TTTAC CATAATTTAAATATA PMT9312_0255 243020 - 243148 + | photosystem II reaction center I protein I PMT9312_0256 243166 - 245097 + | hypothetical protein PMT9312_0257 245721 - 245098 - | 3-isopropylmalate dehydratase, small subunit PMT9312_0258 247127 - 245718 - | isopropylmalate isomerase large subunit PMT9312_0259 248414 - 247140 - | competence/damage-inducible protein cinA glyA 249682 - 248411 - | serine hydroxymethyltransferase PMT9312_0261 249921 - 250172 + | hypothetical protein PMT9312_0262 250186 - 250476 + | hypothetical protein PMT9312_0263 252056 - 250473 - | integral membrane protein MviN TERM 181 250841 - 250816 - G 87 -8.5 -4.15543 | GAAAGATTTCCAAAA TTCTTAATTGG TGCA CCAATTAAAAA CCAATCAAAAAAGAT TERM 182 251028 - 251011 - G 70 -7.1 -3.61894 | AAGGTGGCTGAATAA TCAAAGA CTCC TCTTTGA AAAACTAATTGAACA PMT9312_0264 252129 - 252869 + | putative sugar fermentation stimulation protein TERM 183 253080 - 253068 - g 78 -9.1 -3.53444 | opp_overlap 253077, overlap 253077 CCACTGCTTTGCAAA CGCCT CAA AGGCG CTCTAGGACCAGATT TERM 184 253115 - 253094 - g 81 -10.3 -2.82516 | opp_overlap 253086 253077, overlap 253077 CGCTCTAGGACCAGA TTACAAGAC GCAA GTCTTGTAA ATGGACCTATGCTCC TERM 185 253276 - 253288 + G 70 -6.3 -4.15788 | opp_overlap 253276 AGCATTTTTAGCAAA TAACC TTT GGTTA TTTGTTGCAACAATT PMT9312_0265 253049 - 254512 + | ammonium transporter TERM 186 254534 - 254557 + F 100 -14 -6.06723 | opp_overlap 254538 TTAAAATTAATTTTA GAAACCTGAC TTAT GTCAGGTTTC TTTTTTTTTACAAAA TERM 187 254553 - 254538 - f 83 -9 -3.93638 | opp_overlap 254534 AATTAATTTTAGAAA CCTGAC TTAT GTCAGG TTTCTTTTTTTTTAC TERM 188 254702 - 254723 + G 78 -8.9 -3.48924 | opp_overlap 254702 254701 254698 AAGCTTTAGAAGAAG CTTATCAAA GTGA TTTGATAAG TTCTATAAGAGATAA TERM 189 254723 - 254702 - g 73 -8.9 -2.8789 | opp_overlap 254702, overlap 254701 254698 AAGCTTTAGAAGAAG CTTATCAAA GTGA TTTGATAAG TTCTATAAGAGATAA TERM 190 254780 - 254792 + G 70 -6.3 -4.19177 | TAAATATTAAATTGG CCAAA GCC TTTGG TTTCTGTTGGGGAGT PMT9312_0266 254602 - 255798 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase PMT9312_0267 255903 - 256463 + | hypothetical protein PMT9312_0268 258022 - 256469 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 191 256720 - 256731 + g 74 -3 -5.36314 | overlap 256725 TCATTTGTCCAGCTC CTAT ACCA ATAG TTTTTTGGTCTTTTG TERM 192 256917 - 256928 + g 73 -4.4 -5.055 | ATTATTGATTTAGTA GAAG TTTG CTTC TTTTTTGGGAGTTGA TERM 193 257687 - 257697 + g 71 -5.4 -4.63486 | TTCCCATTTAGATCC CTGT TCT ACAG TTTTCTTAAAAGGAT TERM 194 258620 - 258602 - g 73 -8.2 -3.47227 | opp_overlap 258602 TGCGAATTATTAGAA TTCGATGG ATT CCATCAAA TTGATTCAAATTTAA PMT9312_0269 258056 - 258673 + | putative esterase PMT9312_0270 259038 - 258670 - | hypothetical protein TERM 195 260396 - 260367 - g 77 -4.5 -5.30155 | gap 1, opp_overlap 260376, overlap 260368 260376 TGAGGAATTAAAAAA TCTTAAGAAGAAAA ATA TTTTCTACTTA-GA GCTTCCTATAAAAGA PMT9312_0271 259288 - 260424 + | two-component sensor histidine kinase PMT9312_0272 261142 - 260402 - | cobalamin-5'-phosphate synthase TERM 196 261999 - 262020 + G 71 -8.1 -3.21872 | opp_overlap 261999 261998 CTCTTTAAGAGAAAT TTCTTTAGC TGTT GCTAAAGGA TTCGATATATTTGAC PMT9312_0273 261241 - 262359 + | queuine tRNA-ribosyltransferase PMT9312_0274 262394 - 262534 + | photosystem II reaction center protein K PMT9312_0275 263564 - 262560 - | putative oxidoreductase TERM 197 262816 - 262860 + g 100 -11.7 -4.11216 | opp_overlap 262830 262839 TCATGTGACTTTCGA TGGATTTGTAGAGAGTGATTT AAG AAATCAGTTTCTACAAGCCCA TTTTGACAGTGAGCG PMT9312_0276 264883 - 263615 - | hypothetical protein PMT9312_0277 265116 - 265676 + | orotate phosphoribosyltransferase TERM 198 265942 - 265926 - g 74 -6.7 -4.1958 | opp_overlap 265925 265923 265930, overlap 265923 265930 ACATAAATGAAATAA TTGATTA TTT TAATCAA ATAATTTTCCCAGCT PMT9312_0278 265688 - 266524 + | hypothetical protein PMT9312_0279 267939 - 266521 - | putative nuclease (RecB family) TERM 199 266832 - 266852 + g 88 -7 -5.14477 | TTAAATTTAATTTTT TAGCAATA TTAAT TATTGCTA TTTTTTCAGTCTCTC TERM 200 267267 - 267287 + g 70 -6.2 -4.23723 | overlap 267268 TATTAGATATCCCAT TTGCCTTA AGTAA TAAGGCAG TTTTAGATCCTATTC PMT9312_0280 268019 - 269473 + | phosphomannomutase TERM 201 269912 - 269926 + G 89 -8.6 -4.57341 | GAGGGAAAGGTGGTT TTGGGT ATG ACCCAA TTTTTGAGGAGAGTT PMT9312_0281 269476 - 270051 + | Ham1-like protein PMT9312_0282 271538 - 270054 - | retinal pigment epithelial membrane protein TERM 202 270404 - 270367 - G 100 -13.7 -4.43477 | opp_overlap 270358 270357, overlap 270369 GCCATCCAACTAAAA GTTGCTGTTAATCCTAA GTTT TTAGGATTAACAACAGC AAATTCACAACATTG TERM 203 270402 - 270369 - G 100 -14.9 -2.54881 | opp_overlap 270358 270357, overlap 270367 CATCCAACTAAAAGT TGCTGTTAATCCTAA GTTT TTAGGATTAACAACA GCAAATTCACAACAT TERM 204 271213 - 271228 + g 79 -3.4 -5.64873 | CCAAATACACCTCTA TAAATA AATT TATTTA TTTTTTCTTCTTCCA hisB 272216 - 271611 - | imidazoleglycerol-phosphate dehydratase PMT9312_0284 273019 - 272237 - | enoyl-(acyl carrier protein) reductase PMT9312_0285 273124 - 273717 + | hypothetical protein PMT9312_0286 273771 - 274976 + | putative pleiotropic regulatory protein PMT9312_0287 276397 - 274961 - | deoxyribodipyrimidine photo-lyase type I PMT9312_0288 276957 - 276394 - | NUDIX hydrolase TERM 205 276816 - 276797 - G 87 -11.4 -3.01712 | TTGTCTTTTGTAATA GGCACTGC TAGG GCAGCGCC AGGATGCTTAATGTA PMT9312_0289 277571 - 277005 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 206 277030 - 277042 + g 79 -4.9 -5.1925 | opp_overlap 277008, overlap 277008 GACCATTTTGGGTCA TCAAA CTT TTTGA TTTTTTGGCTTCTAC TERM 207 279087 - 279067 - g 82 -6.2 -5.00138 | overlap 279080 GAGGCAAAGTAAAAA GAATTGCA GTAGA TGCAACTC TTCGAGCTGCTGCAC TERM 208 279612 - 279600 - g 70 -6.3 -4.28432 | opp_overlap 279599 AATGTCAATTTAAAA CAAGA GGT TCTTG ATATTGCTGCAAAAT PMT9312_0290 277620 - 279797 + | protoporphyrin IX magnesium chelatase subunit ChlD PMT9312_0291 280650 - 279805 - | putative ABC transporter PMT9312_0292 281378 - 280656 - | ABC transporter ATP-binding protein TERM 209 281384 - 281406 + H 73 -2 -5.64421 | opp_overlap 281384 GATTAAGCACATTAA CCTCTC CCCAGCTTATT GAGAGG TTTTTTGTTTCAACT PMT9312_0293 281578 - 282963 + | hypothetical protein PMT9312_0294 283490 - 282960 - | NADH dehydrogenase subunit J PMT9312_0295 284224 - 283490 - | NADH dehydrogenase subunit B PMT9312_0296 284591 - 284229 - | NADH dehydrogenase subunit A PMT9312_0297 284668 - 285096 + | putative rubredoxin PMT9312_0298 285106 - 286122 + | Ycf48-like protein TERM 210 286320 - 286304 - g 76 -9.5 -3.02371 | opp_overlap 286303 286304, overlap 286315 TCTTTGAAATAATCA CCAGTAT TAG ATACTGG ATTATTCATGCAGTA TERM 211 286304 - 286320 + G 75 -9.5 -2.83371 | opp_overlap 286304 286315, overlap 286303 TCTTTGAAATAATCA CCAGTAT TAG ATACTGG ATTATTCATGCAGTA PMT9312_0299 286252 - 286506 + | cytochrome b559 subunit alpha PMT9312_0300 286509 - 286655 + | cytochrome b559 subunit beta PMT9312_0301 286667 - 286786 + | photosystem II reaction center L PMT9312_0302 286796 - 286993 + | photosystem II reaction center protein J TERM 212 287050 - 287093 + T 71 -4.6 -4.78149 | overlap 287055 GCCTAATAAGAATCA GTAAATATCCTTAGTTTCTC TTTC GTGGAGCTTGGGATATTTTC TTTTTGGGTTATCAA TERM 213 287055 - 287088 + T 72 -3.1 -5.29885 | overlap 287050 ATAAGAATCAGTAAA TATCCTTAGTTTCTC TTTC GTGGAGCTTGGGATA TTTTCTTTTTGGGTT PMT9312_0303 287930 - 287037 - | methylthioadenosine phosphorylase TERM 214 288991 - 288959 - g 80 -9.4 -3.3771 | overlap 288957 TTTTAAAGTATAAGA TTGATCTCAACTTT ATTAA AAAGTTCAGATCAA AAAGGCTAATTATGA PMT9312_0304 287941 - 290112 + | selenide, water dikinase PMT9312_0305 291360 - 290113 - | tRNA nucleotidyltransferase/poly(A) polymerase TERM 215 290183 - 290193 + g 74 -5.4 -4.86226 | CCCATCTCCTTCCCT GGAT CCC ATCC TTCTTTTTTTAATGT PMT9312_0306 293774 - 291366 - | ATP-dependent DNA helicase Rep TERM 216 292282 - 292294 + g 71 -7.7 -3.41302 | opp_overlap 292281 292280 TTATCATTAAGAACC TCCCA TAA TGGGA TATTTAACCTATTAG PMT9312_0307 294182 - 294694 + | phycobilisome protein PMT9312_0308 295229 - 294678 - | phycoerythrin linker protein CpeS-like TERM 217 294745 - 294773 + gT 75 -8.4 -3.33525 | gap 1 ATTACTGAGTTATTT TCCAGA-TTTCTA ATAG TAGAAAATCTGGA TCTTATGTGAGTGGA PMT9312_0309 295383 - 295204 - | hypothetical protein PMT9312_0310 296137 - 295502 - | hypothetical protein PMT9312_0311 296285 - 296704 + | pollen allergen-like PMT9312_0312 298114 - 296966 - | hypothetical protein PMT9312_0313 298284 - 298123 - | hypothetical protein PMT9312_0314 298682 - 298287 - | hypothetical protein TERM 218 298603 - 298588 - G 74 -9 -3.05522 | opp_overlap 298587, overlap 298587 GAATGGCCCCAAAAT GCTGGT ATTA ACCAGC CTATGATTAATGGAA PMT9312_0315 300541 - 298682 - | carbamoyltransferase TERM 219 300764 - 300795 + r 79 -8 -3.83744 | opp_overlap 300762, overlap 300785 ATTCCATAAATATGT CCCTCAGAGAGT TCTTTTTT GCTCCCTGAGGG TGTTTCTTTGAATAA TERM 220 300868 - 300853 - R 81 -5.4 -5.24989 | opp_overlap 300853, overlap 300845 TTAGACATTAAAAAA GCACCT TTTC AGATGC TCATTTAACCCTTGT TERM 221 300922 - 300938 + r 70 -8.7 -2.62616 | TTGAACTGGGGACAC GGCGATT TTC AGTCGCC TGCTCTACCAACTGA PMT9312_0316 302283 - 301054 - | carbohydrate kinase TERM 222 302148 - 302161 + g 71 -5.3 -4.57569 | opp_overlap 302148 TTTCACAAGAATTGA TCCAA GAAT TTGGA TTTTTAAAGCCATAC PMT9312_0317 303537 - 302296 - | S-adenosylmethionine synthetase TERM 223 303679 - 303714 + r 100 -22.1 -3.72576 | opp_overlap 303675 303687 GTATCTAGACAGTTT CCGACGAAGCTGAAG CGGTTT CTTCAGCTTCGTCGG TTTGCTCGAACAACA TERM 224 303706 - 303687 - R 70 -7.9 -3.14683 | opp_overlap 303679, overlap 303675 ACAGTTTCCGACGAA GCTGAAG CGGTTT CTTCAGC TTCGTCGGTTTGCTC PMT9312_0318 304768 - 303668 - | 30S ribosomal protein S1 PMT9312_0319 305347 - 304868 - | transcriptional regulator NrdR TERM 225 305432 - 305417 - R 100 -7.6 -6.31682 | opp_overlap 305417 AAAAGTAAAAAAAAA CCTCTT GTTA AAGAGG TTTTTTTTTCTAAGT TERM 226 305417 - 305432 + r 100 -7.6 -6.24157 | opp_overlap 305417 AAAAGTAAAAAAAAA CCTCTT GTTA AAGAGG TTTTTTTTTCTAAGT psbT 305546 - 305448 - | photosystem II reaction center protein T PMT9312_0321 307093 - 305570 - | photosystem II PsbB protein (CP47) TERM 227 307002 - 306990 - G 85 -10.5 -3.56251 | overlap 306979 TAAAGAGCCATAGAA CCGGC CCA GCCGG CTAATAATGCAGTAT PMT9312_0322 307318 - 307680 + | ferredoxin-like PMT9312_0323 307783 - 307935 + | photosystem II reaction center M protein (PsbM)-like PMT9312_0324 307947 - 308816 + | HemK family modification methylase TERM 228 309345 - 309327 - g 88 -7.4 -5.0538 | TTCCATGGGAAAAAA GTAGTGGC AAA GCCAGTAC CATAATATTTTGGAA PMT9312_0325 308840 - 309421 + | hypothetical protein PMT9312_0326 310072 - 309737 - | cell division topological specificity factor MinE PMT9312_0327 310890 - 310075 - | putative septum site-determining protein MinD TERM 229 310629 - 310644 + g 72 -2.5 -5.4251 | CTCCTGCAGGTAAAA GAGCC AGATTA GGTTC TTTTTTATGTCTGAC PMT9312_0328 311667 - 311008 - | septum site-determining protein MinC TERM 230 311480 - 311495 + g 72 -4.8 -4.85267 | opp_overlap 311480 CGGATGTCTAAATTA TCAAAA TTAT TTTTGA TTTTTGATAATTTAT PMT9312_0329 312934 - 311678 - | metal dependent phosphohydrolase PMT9312_0330 314262 - 312979 - | carboxyl-terminal protease TERM 231 313530 - 313548 + g 81 -4.6 -5.40474 | overlap 313528 313531 CTTTCTCTTTTAACT CTTGAAGA GCT TCTTCAAC TTTTTTTGGGACGCT TERM 232 313531 - 313547 + g 77 -8.1 -3.83561 | overlap 313528 313530 TTTCTCTTTTAACTC TTGAAGA GCT TCTTCAA CTTTTTTTGGGACGC TERM 233 314597 - 314619 + G 77 -9.3 -3.18389 | overlap 314593 314611 GTTGATAAGATCTGT TCATAGATG GAGCG CATCTATGA TGGTTTTGATGTTAA PMT9312_0331 314334 - 314990 + | cytochrome b6 TERM 234 315055 - 315042 - g 74 -3.1 -5.44119 | overlap 315043 315045 TCTACGTTAAAAAAA CCAGA TCTA TCTGA TCCAAAATTAAGAGC PMT9312_0332 315024 - 315506 + | cytochrome b6-f complex subunit IV PMT9312_0333 316948 - 315509 - | putative neutral invertase-like protein TERM 235 315835 - 315849 + g 75 -5 -5.10163 | overlap 315836 TCCAAGGCCAATTTT TTGGAT CAG ATCCAG TTTTGTTTTGCCATT TERM 236 316307 - 316317 + g 71 -5.4 -4.60041 | opp_overlap 316307 ACTTAATTCCATTAA GTTG ATA CAAC TTTTTAAACATCCAT TERM 237 316425 - 316414 - G 73 -4.4 -5.08088 | AATCCGGAACAAAAA GTAC TGGT GTAC CTTCAAATGTTGGAT TERM 238 317199 - 317184 - R 77 -9 -3.35996 | TATTTTCAGCCAGAA GAAGGG TTTT CCCTTC GAAATGAGTTATTCA TERM 239 318679 - 318659 - R 74 -8.2 -3.53733 | GGCACTCTAGAAAGA CCGCCGGT GATAA ACCGGAGG AAGGTGTGGATGACG TERM 240 319029 - 319010 - R 72 -9.2 -2.65808 | overlap 319006 319007 AGTCGTAACAAGGTA GCCGTACC GGAA GGTGCGGC TGGATCACCTCCTAA TERM 241 319565 - 319579 + r 72 -7.2 -3.72324 | TCTATTAAGCTGATG CTTCAA TTT TTGAAG TTATTGGTCAAGCTA TERM 242 319864 - 319845 - R 89 -10.8 -3.66803 | opp_overlap 319844 319843 GGGGAATAGCCCAAA CCGATAGT CTTG ACTATCGG GGTTGTGGGACAGCA TERM 243 320100 - 320089 - R 77 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACAT TERM 244 322333 - 322321 - R 75 -9.1 -3.1634 | GCTGAAAGCATCTAA GTGGG AAG CCCAC CTCAAGATGAGTATT TERM 245 322679 - 322655 - R 85 -8.6 -4.35581 | opp_overlap 322655 GTAAAATATTTAAAA GGGTTTACTC TTATT GAGTAAGCCC TTTTTTACTTTTGGC TERM 246 322655 - 322679 + r 100 -10.8 -5.46698 | opp_overlap 322655 GTAAAATATTTAAAA GGGTTTACTC TTATT GAGTAAGCCC TTTTTTACTTTTGGC PMT9312_0334 323565 - 322684 - | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase TERM 247 323468 - 323490 + g 79 -4.9 -5.1861 | opp_overlap 323466 GTAGGGAAAGCCACA GTTGAATTC CTACA GACTTCAAC TTTTTTAATAATAAA PMT9312_0335 323779 - 323570 - | photosystem I reaction center subunit IV PMT9312_0336 324630 - 323860 - | peptidoglycan-binding LysM PMT9312_0337 326083 - 324692 - | putative aldehyde dehydrogenase TERM 248 325116 - 325127 + g 71 -3 -5.1356 | CTCAAAATTGTAGGA GTTA TTTT TAAC TTTTTCTTACTGAAA TERM 249 325377 - 325367 - G 77 -4 -5.32944 | overlap 325368 TCCAGAATTAAAAAA TTTG CCC CAAA CAATTCTTTTTGCAG TERM 250 326960 - 326977 + G 77 -8.5 -3.74928 | overlap 326971 AGGGAGTTAATTGGT GATTTGG ATTC CCAAATC TTATTGGATTGCTCT PMT9312_0338 326243 - 327133 + | GCN5-related N-acetyltransferase PMT9312_0339 327484 - 327206 - | hypothetical protein PMT9312_0340 328426 - 328860 + | NADH-plastoquinone oxidoreductase chain 5-like PMT9312_0341 329366 - 328857 - | plastoquinol terminal oxidase PMT9312_0342 329961 - 329599 - | hypothetical protein TERM 251 329835 - 329811 - G 77 -3.8 -5.49568 | gap 1, opp_overlap 329811, overlap 329824 AATCTAAAAGAAAAA TCTTTATGAAA ACCT TTTCA-AAAGA ATATTTAGTTCCGAT PMT9312_0343 330251 - 329943 - | hypothetical protein TERM 252 330532 - 330516 - H 74 -8.1 -3.5032 | opp_overlap 330514 330510, overlap 330514 GCTTTATAGTAAATA TGTACTA TTA TAGTACA GATGTATTATTAAAT PMT9312_0344 330845 - 331132 + | hypothetical protein PMT9312_0345 332997 - 331468 - | phytoene dehydrogenase TERM 253 333035 - 333012 - H 75 -9.8 -2.56432 | opp_overlap 333012, overlap 333011 TTTAATATTATTAAC TCTGTTTTTA TGAA TAAAAACAGA TACTTTTAAACGAAG TERM 254 333012 - 333035 + H 77 -9.8 -3.08032 | opp_overlap 333012 333011 TTTAATATTATTAAC TCTGTTTTTA TGAA TAAAAACAGA TACTTTTAAACGAAG PMT9312_0346 333325 - 333810 + | hypothetical protein PMT9312_0347 334027 - 333812 - | hypothetical protein TERM 255 334091 - 334069 - H 100 -9.3 -4.94222 | AATAACTTATAAAAA TCTTGTTCT TATTT AGAACAAGA TAAATAGATAATTAT PMT9312_0348 334119 - 334436 + | helper component proteinase-like PMT9312_0349 334915 - 334448 - | hypothetical protein TERM 256 334861 - 334875 + gT 77 -7.2 -4.26938 | TAGTTGTTGCTTTTT TCTTTC TTT GAAAGA TTCTTGTTTTCTGAA PMT9312_0350 335135 - 334845 - | twin arginine-targeting protein translocase PMT9312_0351 335368 - 335225 - | hypothetical protein PMT9312_0352 335545 - 335688 + | hypothetical protein TERM 257 335879 - 335857 - f 77 -9.4 -3.08211 | overlap 335854 ACTTTTTTAAAATTA GTTATTTTTA AAT TAAAAATAAC TCCTAAAAAAAGAAT TERM 258 335943 - 335915 - f 86 -7.7 -4.74406 | opp_overlap 335918, overlap 335933 ATAAAAAAATATAAA TTATTAATTCCAT AAT ATTGAATTAATAA ATTCACCTTAGAGTA PMT9312_0353 336077 - 336526 + | putative bacterioferritin comigratory protein PMT9312_0354 336594 - 336866 + | hypothetical protein PMT9312_0355 337294 - 336995 - | hypothetical protein TERM 259 337369 - 337382 + r 73 -3.9 -5.39221 | GACCCAACTAAAGGG TAAGA ACAT TCTTA TTTTTTCATTATTAT TERM 260 337395 - 337423 + r 76 -6.2 -4.65838 | TTATTTTTTCATTAT TATCTTCCATAA AGCAA TTATGGAAAATA TTTTTAAGATCTGTG TERM 261 337500 - 337468 - R 86 -7.1 -5.09245 | opp_overlap 337476, overlap 337476 TTAAAACTATAAAAA TTAAAAAAGACGGTT AAT AGCCGTCTTTTCAAA AATTAATTTTAGAGA TERM 262 337492 - 337476 - R 100 -6.5 -5.56112 | opp_overlap 337476, overlap 337468 ATAAAAATTAAAAAA GACGGTT AAT AGCCGTC TTTTCAAAAATTAAT TERM 263 337476 - 337492 + r 83 -8.7 -4.11751 | opp_overlap 337476 337468 ATAAAAATTAAAAAA GACGGTT AAT AGCCGTC TTTTCAAAAATTAAT PMT9312_0356 337758 - 337522 - | spectrin repeat-containing protein TERM 264 337644 - 337662 + g 77 -7.5 -3.98991 | TTTGTGTTTTAATTT CATCAAG TTCTT CTTGATG TTGGTTTTTCTTTAA TERM 265 337993 - 337976 - g 74 -5.7 -4.69027 | AAATGGATTTAAAAA TTACTAA AACA TTAGTAA TCCCATCCAAAGAAA PMT9312_0357 337963 - 338391 + | hypothetical protein PMT9312_0358 338464 - 338712 + | TIR domain-containing protein TERM 266 338982 - 338996 + T 71 -2.9 -5.52347 | opp_overlap 338982 TATATCTAATTAAAA GTTTT AGAAG AAAAC TTTTTTGATTTTATT PMT9312_0359 339832 - 338972 - | abortive infection protein TERM 267 339336 - 339316 - G 85 -6.9 -5.04222 | opp_overlap 339315 339319, overlap 339319 GAACGAAACTAAAAA CTATAGCTT GTA AAGCTATTG ATATTTTTGTACCAT TERM 268 339319 - 339333 + g 70 -7.2 -3.64205 | opp_overlap 339316 339319, overlap 339315 CGAAACTAAAAACTA TAGCTT GTA AAGCTA TTGATATTTTTGTAC TERM 269 339681 - 339670 - G 71 -3 -5.1417 | TTAGAAAAGTAAAAA TAGT ACCA ACTA AGGATATATTTTCTT TERM 270 339746 - 339713 - G 70 -4.6 -4.87318 | overlap 339716 339719 CTCAAAATTCAAAAA TAATAATGGCTGAG ATAAAG CCCAGCCAATACCA TAAAGAATTGGAACA TERM 271 339743 - 339716 - G 74 -6.3 -4.51654 | overlap 339713 339719 AAAATTCAAAAATAA TAATGGCTGAG ATAAAG CCCAGCCAATA CCATAAAGAATTGGA TERM 272 339740 - 339719 - G 83 -8 -4.32491 | overlap 339716 339713 ATTCAAAAATAATAA TGGCTGAG ATAAAG CCCAGCCA ATACCATAAAGAATT TERM 273 340856 - 340831 - H 70 -5.5 -4.7219 | CAGATTAAGAGAAAA GTAAATCAGCA TATT TACGGATTTAC TGAAAATATAAAAAG TERM 274 341152 - 341183 + H 100 -13.3 -3.36569 | opp_overlap 341159, overlap 341159 341177 AAGGAAATGAGATAT TAAAAAAGGACTG CTCAAA CAGTCCTTTTTTA TGTTTAAGAAATTGA TERM 275 341159 - 341176 + H 100 -7 -5.56264 | opp_overlap 341159, overlap 341152 TGAGATATTAAAAAA GGACTG CTCAAA CAGTCC TTTTTTATGTTTAAG TERM 276 341176 - 341159 - H 93 -7.7 -5.24989 | opp_overlap 341159 341152 TGAGATATTAAAAAA GGACTGC TCAA ACAGTCC TTTTTTATGTTTAAG PMT9312_0360 341259 - 342209 + | proline iminopeptidase TERM 277 342571 - 342584 + F 86 -3.9 -6.01369 | CGTATTGTATTTGCT TTTTC TTAG GAAAA TTTTTTTATTATTTA TERM 278 342703 - 342721 + F 71 -4.7 -4.7923 | ATACATTCTTAAGTC TATCTTA AAACA TAAGATA TTTATTTCTTTAAAT PMT9312_0361 342817 - 343440 + | TenA family transcriptional activator TERM 279 344118 - 344108 - g 87 -5.4 -5.59879 | opp_overlap 344111 TATAAATACAAAAAA TACC CAT GGTA GTGGTTGTACTTTAA PMT9312_0362 343491 - 344270 + | phosphomethylpyrimidine kinase PMT9312_0363 344455 - 344297 - | hypothetical protein TERM 280 344805 - 344824 + H 82 -6.6 -4.91473 | ATCAGTTATTTGCGC TTAAGTTT TAGA AAACTTAA TTTATTTTTGAGTTA PMT9312_0364 344892 - 345359 + | hypothetical protein PMT9312_0365 345431 - 345808 + | phosphoenolpyruvate carboxykinase-like TERM 281 346754 - 346770 + G 74 -5.2 -4.76088 | AAGGGGATGGGATTT GATGTT CATAA AACATC TTATTTTTTAGTTTG TERM 282 347006 - 347029 + G 72 -9 -2.76909 | opp_overlap 347009 347011, overlap 347011 GTGAAAGATGATAGT GAAGAGATTC AAGG GAATCTTTTC TAGTCTAATTTTGTC PMT9312_0366 346178 - 347032 + | hypothetical protein PMT9312_0367 347130 - 347243 + | hypothetical protein PMT9312_0368 347256 - 348167 + | hypothetical protein PMT9312_0369 348681 - 348181 - | hypothetical protein TERM 283 349632 - 349616 - g 73 -8.1 -3.53761 | GAATTGCTTGGTAAA GGTTTAA GGG TTAAACC GAGCCGCCCTGAATT PMT9312_0370 349115 - 349897 + | putative periplasmic protein TERM 284 350013 - 350038 + T 100 -9 -5.12617 | opp_overlap 350029, overlap 350036 TTATCCATTCCTTCG GGGGTATCCC AATTAA GGGGTATCCC TTTTTTAAATGGTTC PMT9312_0371 350197 - 349994 - | hypothetical protein TERM 285 350454 - 350398 - H 74 -7.6 -3.8948 | gap 1, opp_overlap 350408 350411 ACAACAACTAAAACA CCTATATAAATTACGTG-GGTATGTGT GTAA ACACATAATGCACGTACTGTATATAGG TACCTATAGGGTGAT TERM 286 350883 - 350897 + G 72 -3.6 -5.1615 | overlap 350886 ATTAACAAAAATACA GTATTT AAA AGATAC TTTTTTGAATATTAA PMT9312_0372 350503 - 350919 + | T/G mismatch-specific endonuclease TERM 287 351329 - 351313 - g 74 -9.5 -2.604 | opp_overlap 351309 351309, overlap 351309 351322 351325 GAAGAGATTAATTCA GTAGATG AAT CATCTAC AAAAGTTGTAAATCA PMT9312_0373 350974 - 353700 + | endonuclease PMT9312_0374 353755 - 354747 + | hypothetical protein PMT9312_0375 354755 - 356677 + | hypothetical protein PMT9312_0376 356684 - 357577 + | hypothetical protein PMT9312_0377 357580 - 358449 + | hypothetical protein PMT9312_0378 360528 - 358468 - | DNA-cytosine methyltransferase PMT9312_0379 361238 - 360525 - | hypothetical protein TERM 288 360912 - 360928 + g 70 -8 -3.12803 | opp_overlap 360910, overlap 360910 AACGGTAAATCCATC TTCCGG ATCAA CCGGAA TATTACCTCTCCATC PMT9312_0380 362266 - 361235 - | hypothetical protein TERM 289 361923 - 361912 - G 72 -7.2 -3.78934 | opp_overlap 361912 CTGTTCTCACAAGAA GGGC TTCT GCCC TGACTTCTTCTCCAT PMT9312_0381 364233 - 362269 - | hypothetical protein TERM 290 362618 - 362630 + g 76 -3.4 -5.34857 | AGTGCGGAACTTTGT GTCT TGGAT AGAC TTTTCTTTTCTTTAA PMT9312_0382 365012 - 364398 - | putative site-specific integrase/recombinase TERM 291 365517 - 365495 - H 78 -9.9 -2.58892 | gap 1 ACTGATACCAAGCTA TCCCG-CGAG TGCC CTCGTCGGGA CTTGAACCCGAGACC TERM 292 365534 - 365550 + H 82 -10.9 -2.62983 | opp_overlap 365546 TTGAACCCGAGACCT CTCCCTT ACC AAGGGAG TGCTCTACCGCTGAG PMT9312_0383 365710 - 366210 + | 3-dehydroquinate dehydratase PMT9312_0384 366211 - 366819 + | putative tRNA-(MS(2)IO(6)A)-hydroxylase TERM 293 367252 - 367233 - g 77 -3 -5.58179 | GAGGATAATAAAAAA TAATTATC CCAA AATAATTA TCAGAACCATACCTG PMT9312_0385 366841 - 367596 + | cobalt-factor II C20-methyltransferase TERM 294 367617 - 367607 - g 80 -5.4 -5.20534 | ATTAATGAATAAAAA GGAA GAA TTCC CAGAAAATCAATTTA PMT9312_0386 367596 - 368081 + | hypothetical protein engA 368156 - 369529 + | GTP-binding protein EngA TERM 295 370090 - 370079 - g 77 -4.4 -5.14163 | opp_overlap 370079 370087 ATCCATTAAGAAAAA TTGG ATTA CCAA TTAGTAAGTGGCTTT TERM 296 370401 - 370411 + G 76 -5.4 -5.06414 | ATCGATTTGTTTTAT TTGC ATA GCAA TTTTTCTTAGAAAAC PMT9312_0388 369529 - 370443 + | cobalt ABC transporter permease PMT9312_0389 370462 - 370728 + | hypothetical protein TERM 297 370933 - 370919 - g 71 -2.2 -5.46629 | AAGACCTTAAAAAAA TAAAAT GGC ACTTTA TTGGACGAATACAAA PMT9312_0390 370732 - 371367 + | hypothetical protein PMT9312_0391 371518 - 372093 + | hypothetical protein PMT9312_0392 372101 - 372913 + | pyrroline-5-carboxylate reductase PMT9312_0393 374076 - 372910 - | putative glycosyl transferase, group 1 PMT9312_0394 374946 - 374161 - | putative recombination protein O PMT9312_0395 375606 - 374947 - | putative deoxyribose-phosphate aldolase PMT9312_0396 376203 - 375619 - | SSU ribosomal protein S30P / sigma 54 modulation protein TERM 298 375717 - 375732 + g 72 -4.8 -4.84262 | opp_overlap 375714, overlap 375714 CATAAAAATCATGAT CAATTA GATC TAATTG TTTTCTTGCTTCTTC TERM 299 376832 - 376820 - g 72 -3.5 -5.2291 | AGATTACAATAAAAA TTTAA ATA TTAAA GAAGTCAAGAAAATT PMT9312_0397 376248 - 376898 + | lipoate-protein ligase B PMT9312_0398 376926 - 378869 + | putative long-chain-fatty-acid--CoA ligase PMT9312_0399 378908 - 379351 + | hypothetical protein PMT9312_0400 379566 - 380933 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 300 380964 - 381000 + G 85 -11.1 -3.30554 | opp_overlap 380960 380964 380975, overlap 380968 380972 CAAATTAATAATGAA GAAAGAGATTATAAGCT TGA AGCTTATGATTACTTTC TTGATCCTTCATTAA TERM 301 380968 - 380996 + G 70 -6.1 -4.29227 | opp_overlap 380964 380960 380975, overlap 380964 380972 TTAATAATGAAGAAA GAGATTATAAGCT TGA AGCTTATGATTAC TTTCTTGATCCTTCA TERM 302 380972 - 380992 + G 73 -7.7 -3.70925 | opp_overlap 380964 380960 380975, overlap 380968 380964 TAATGAAGAAAGAGA TTATAAGCT TGA AGCTTATGA TTACTTTCTTGATCC TERM 303 381544 - 381528 - g 100 -13.7 -2.6072 | opp_overlap 381531 381532 381537, overlap 381524 TATGCAATTAATCCA GGGGCAG TTG CTGCCCC AACAGCTGGTTTACA TERM 304 382019 - 381984 - g 100 -13.6 -5.252 | opp_overlap 381982 382014 382016 GATTTGTATAAAAAA GCCATAAAAGAAAAAT TTAG ATTCTTCTCTTATGGC GATGCTATGTATATT PMT9312_0401 380940 - 382076 + | queuosine biosynthesis protein PMT9312_0402 383052 - 382066 - | O-acetylserine (thiol)-lyase A PMT9312_0403 384606 - 383137 - | putative cystathionine gamma-synthase TERM 305 384096 - 384106 + g 86 -4 -5.72254 | TTATTTTTGTAGATT TAGA GAT TCTA TTTTTTATTCTTTGA TERM 306 384371 - 384385 + g 74 -2.2 -5.57888 | TATGGCCAGATACTT TTATTA TTG TAGTAA TTTTCTTTTTTTACT PMT9312_0404 385773 - 384610 - | putative cystathionine gamma-synthase TERM 307 385689 - 385673 - G 70 -6.5 -4.2748 | opp_overlap 385672 GATGTAGAAAAAATA GGAGGCA TAA TGCATCC CGTGTCTTCTGCAAA TERM 308 385835 - 385789 - R 76 -7.1 -4.41633 | gap 2, opp_overlap 385802, overlap 385796 385797 385802 TATTTTTAAAAATAA GAATTAAGTTAAATCTCTCATTT TTT AAACGAGAGATTTAA--TAATCC AAAGAAAAGTTGTAT TERM 309 385830 - 385796 - R 91 -11 -3.69301 | opp_overlap 385802, overlap 385789 385797 385802 AAAAATAAGAATTAA GTTAAATCTCTCATTT TTT AAACGAGAGATTTAAT AATCCAAAGAAAAGT TERM 310 385829 - 385797 - R 100 -14.5 -2.7914 | opp_overlap 385802, overlap 385796 385789 385802 AAAATAAGAATTAAG TTAAATCTCTCATTT TTT AAACGAGAGATTTAA TAATCCAAAGAAAAG TERM 311 385802 - 385824 + r 76 -7.8 -3.78775 | opp_overlap 385797 385796 385789 385802 AAGAATTAAGTTAAA TCTCTCATTT TTT AAACGAGAGA TTTAATAATCCAAAG TERM 312 385824 - 385802 - R 85 -10 -3.827 | opp_overlap 385802, overlap 385797 385796 385789 AAGAATTAAGTTAAA TCTCTCATTT TTT AAACGAGAGA TTTAATAATCCAAAG rpsD 386458 - 385850 - | 30S ribosomal protein S4 PMT9312_0406 386599 - 386790 + | hypothetical protein PMT9312_0407 386795 - 387097 + | hypothetical protein TERM 313 387802 - 387789 - g 74 -3.9 -5.27938 | ATTTTCAAACAAAAA GAAAA TTAT TTTTC CCACCTTACTTAAAT murE 387107 - 388642 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase PMT9312_0409 388724 - 389428 + | putative short chain dehydrogenase PMT9312_0410 390634 - 389459 - | putative L-cysteine/cystine lyase PMT9312_0411 391465 - 390671 - | hypothetical protein TERM 314 391522 - 391506 - R 100 -9.4 -6.13 | opp_overlap 391505 391503 391506 ATAGCCAAAAAAAAA GCCCCT GAAAA AGGGGC ATATTATTTATAAAT TERM 315 391506 - 391522 + r 76 -9.4 -2.77537 | opp_overlap 391506, overlap 391505 391503 ATAGCCAAAAAAAAA GCCCCT GAAAA AGGGGC ATATTATTTATAAAT PMT9312_0412 391733 - 391542 - | hypothetical protein TERM 316 391808 - 391795 - H 82 -6.7 -4.86621 | AGGGTGAACGAAAAA GTAGC TATT GCTAC AAAATTATTATAAGC PMT9312_0413 391971 - 392228 + | hypothetical protein PMT9312_0414 392495 - 392250 - | NifU-like protein TERM 317 392741 - 392704 - g 80 -5.7 -5.00895 | CTTATTATAGAAAAA TTAAAAGCTCCAGGA AGTGAAAG TACTGGCGCTTTTAA TAATGCAGGTACAGG PMT9312_0415 392566 - 394062 + | malate:quinone oxidoreductase PMT9312_0416 394118 - 395926 + | GTP-binding protein LepA PMT9312_0417 396030 - 396851 + | putative ABC transporter, oligopeptides PMT9312_0418 397525 - 396854 - | tRNA/rRNA methyltransferase (SpoU) PMT9312_0419 397623 - 397826 + | hypothetical protein TERM 318 398054 - 398065 + G 72 -5.8 -4.41348 | CCTTTTTATTCGATG GTGG ATGT CCAC TTTGTTTGAGAGAAA PMT9312_0420 398023 - 398415 + | hypothetical protein PMT9312_0421 398418 - 398654 + | hypothetical protein PMT9312_0422 398658 - 398783 + | hypothetical protein TERM 319 399232 - 399221 - g 95 -5.8 -5.88197 | opp_overlap 399220 399222 TTAAATACAAAAAAA CCTC TTAT GAGG AGATTTTATGAGAAT PMT9312_0423 398786 - 400276 + | hypothetical protein PMT9312_0424 400381 - 400560 + | hypothetical protein TERM 320 401862 - 401852 - g 79 -2.6 -5.72053 | TAAGTAAAGAAAAAA TAAA ATC TTTA ACTTTATTACAGGAA PMT9312_0425 400774 - 402090 + | sun protein PMT9312_0426 403869 - 402100 - | putative penicillin binding protein TERM 321 403438 - 403462 + g 76 -9.5 -3.02371 | overlap 403435 403443 TGATATAAATATTTC TTTGAGTTTTC TTT GAAAACTTAAA TCATTATTTAGAAAA TERM 322 403866 - 403842 - G 72 -5.9 -4.3534 | TTGGAATTATTAAAA CAAAAGATT TGAATTT AATCTTTTG CACCTTAAGCAACTA PMT9312_0427 404818 - 403871 - | bacteriochlorophyll/chlorophyll a synthase PMT9312_0428 405051 - 404827 - | hypothetical protein PMT9312_0429 405111 - 405881 + | imidazole glycerol phosphate synthase subunit hisF PMT9312_0430 405922 - 406623 + | demethylmenaquinone methyltransferase TERM 323 406616 - 406632 + T 70 -3.8 -5.10004 | opp_overlap 406621 GGATACTAATTTTAA CTAAAT AAAGA ATTTAG TTTTTAATTATTTTT PMT9312_0431 407094 - 406636 - | hypothetical protein PMT9312_0432 407194 - 407943 + | putative biotin--acetyl-CoA-carboxylase ligase PMT9312_0433 408632 - 407946 - | ATPase TERM 324 408168 - 408135 - G 74 -9.1 -3.14132 | gap 1, opp_overlap 408131 408128 TTCGTCTGCTAGTAA TATTGC-AGGGTTATT GAT AATAGCCCTAGCAATA GCTACTCGTTGTTGT PMT9312_0434 410172 - 408652 - | NAD(P)H-quinone oxidoreductase subunit 2 TERM 325 409025 - 409008 - G 82 -9.9 -3.1916 | overlap 409019 CAAAAAATCCTAACA TTGGAGG TAAA CCTCCAA GAGAAAGAAGACAAA TERM 326 410299 - 410277 - H 74 -7.2 -3.96892 | AATTTTCAGGAGAAA TTACTTGAAA AAG TTTCAAATAA TCATAATATGCCCTA TERM 327 410411 - 410387 - g 77 -8.7 -3.75461 | opp_overlap 410386 410387 GAAAGTCCCACTAAA GCAAAAACTAT AAG AAAGTTTTTGC CTTCTAATTATGAAG PMT9312_0435 410348 - 412954 + | DNA topoisomerase I TERM 328 412965 - 412992 + G 87 -4.4 -5.79588 | opp_overlap 412963, overlap 412966 GTTAAAAATATGATT TTAAAAAAAAAA GAAT TTTTTTTATTAA TTTTTTTAATTTTAA TERM 329 413432 - 413410 - g 86 -4.2 -5.75945 | opp_overlap 413416, overlap 413416 ATTCTTCAAAAAAAA GAAAAATTGA GCT TCAATCTTAC AAAATAATTTTCATA TERM 330 413426 - 413416 - g 90 -4 -5.94743 | opp_overlap 413416, overlap 413410 CAAAAAAAAGAAAAA TTGA GCT TCAA TCTTACAAAATAATT PMT9312_0436 412959 - 413579 + | hypothetical protein TERM 331 413852 - 413863 + G 72 -5.8 -4.49644 | GAACCTTATTTTTAT TCCC CTAT GGGA TTTTGGCTTTTTGGT PMT9312_0437 413602 - 414240 + | hypothetical protein TERM 332 414991 - 415016 + G 89 -11.9 -3.34902 | opp_overlap 414987, overlap 414989 414994 GGGTTTATTAATTGG TGCCAGGTTGG CGAA CCAACCTGTCA TATTATCTGGTGGAA TERM 333 414994 - 415013 + G 90 -12.2 -2.83964 | opp_overlap 414987, overlap 414991 414989 TTTATTAATTGGTGC CAGGTTGG CGAA CCAACCTG TCATATTATCTGGTG TERM 334 415097 - 415084 - g 77 -3.9 -5.44119 | CTTAGGTGAAAAAAA TAAAG ATGA CTTTA TTGAGGATGTTTTTA PMT9312_0438 414254 - 415411 + | hypothetical protein PMT9312_0439 415412 - 416410 + | hypothetical protein PMT9312_0440 417541 - 416399 - | aldo/keto reductase PMT9312_0441 417654 - 418307 + | riboflavin synthase subunit alpha PMT9312_0442 418671 - 418318 - | transcriptional regulator AbrB TERM 335 418765 - 418727 - R 77 -9.4 -3.0395 | opp_overlap 418727 418731, overlap 418731 AGAGATGTGGCAATA TAAATTAATAAAAAAT ATATTTA ATTTTTTATTAATTTA TTTTTCTCATAAAAG TERM 336 418727 - 418765 + r 100 -9.4 -4.91109 | opp_overlap 418727 418731, overlap 418731 AGAGATGTGGCAATA TAAATTAATAAAAAAT ATATTTA ATTTTTTATTAATTTA TTTTTCTCATAAAAG TERM 337 418731 - 418761 + r 79 -5.8 -4.98911 | opp_overlap 418731 418727, overlap 418727 ATGTGGCAATATAAA TTAATAAAAAAT ATATTTA ATTTTTTATTAA TTTATTTTTCTCATA PMT9312_0443 419374 - 418772 - | cytochrome c oxidase, subunit III PMT9312_0444 421006 - 419381 - | cytochrome c oxidase, subunit I PMT9312_0445 421806 - 421003 - | putative cytochrome c oxidase, subunit 2 PMT9312_0446 422069 - 422995 + | hypothetical protein PMT9312_0447 422992 - 423993 + | putative protoheme IX farnesyltransferase TERM 338 424896 - 424910 + G 76 -3.6 -5.47159 | overlap 424898 AAGTGGAATTAGCCT TTTCAA AGT TTGAGA TTTTTTCTCTTACCC PMT9312_0448 424031 - 425047 + | multidrug ABC transporter PMT9312_0449 425096 - 425920 + | putative multidrug efflux ABC transporter PMT9312_0450 425928 - 426317 + | hypothetical protein groEL 428076 - 426322 - | chaperonin GroEL PMT9312_0452 428208 - 428387 + | hypothetical protein PMT9312_0453 429137 - 428388 - | 3-oxoacyl-[acyl-carrier-protein] reductase ispD 429230 - 429910 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PMT9312_0455 430776 - 429907 - | hypothetical protein ubiA 431694 - 430786 - | prenyltransferase TERM 339 431323 - 431307 - G 72 -7.3 -3.85724 | AAAAAGCAAGTGAAA TGGAAAG GAG CCTTCCA GGTTGAGGTAGTGAC TERM 340 432490 - 432478 - g 80 -9.1 -3.66018 | opp_overlap 432478 CTATGATTGCAACAA GTGGC ACT GCCAC TTCATTAGGAAATTT TERM 341 432478 - 432490 + G 77 -9.1 -3.35088 | opp_overlap 432478 CTATGATTGCAACAA GTGGC ACT GCCAC TTCATTAGGAAATTT PMT9312_0457 431799 - 433394 + | putative exopolyphosphatase PMT9312_0458 433891 - 433391 - | hypothetical protein TERM 342 433816 - 433837 + g 79 -6.7 -4.71318 | overlap 433799 CTTTAATAAAATTTC CAATTCTTT TTAA AGAGAATTG TTCTTTTTTGGTATT PMT9312_0459 434693 - 433938 - | precorrin-4 C11-methyltransferase PMT9312_0460 435579 - 434686 - | prolipoprotein diacylglyceryl transferase TERM 343 435437 - 435450 + g 85 -6.7 -5.00616 | AGTGGGTTAATATTC CTTGC CTTT GCAAG TTTTTTAGAGACAAA PMT9312_0461 436545 - 435592 - | apocytochrome f PMT9312_0462 437085 - 436549 - | cytochrome b6-f complex iron-sulfur subunit TERM 344 436594 - 436582 - G 73 -7.7 -3.58343 | opp_overlap 436581 TTCATTAGTTCTAAA GTCAG TTT CTGAC CATTGTTTGACAAGT PMT9312_0463 437209 - 437526 + | hypothetical protein PMT9312_0464 438211 - 437495 - | protein secretion component, Tat family TERM 345 437904 - 437894 - G 81 -3.2 -5.81032 | TAATCCTAAAAAAAA CAGA AGA CCTG AACCAAAAACTGCGG PMT9312_0465 438595 - 438335 - | hypothetical protein PMT9312_0466 440325 - 438625 - | secreted protein MPB70 precursor-like TERM 346 440925 - 440964 + G 75 -8.1 -3.75437 | opp_overlap 440927 440932 440935, overlap 440927 440932 GTTGATGAAACAGCT AAGAGAATAATCAAGTT AATACA AACTTGACTATTCTCTC TTTAATCAGCTCATT TERM 347 440962 - 440927 - g 100 -12.9 -3.25479 | opp_overlap 440927 440925 440932, overlap 440932 440935 TGATGAAACAGCTAA GAGAATAATCAAGTT AATACA AACTTGACTATTCTC TCTTTAATCAGCTCA TERM 348 440927 - 440962 + G 85 -10.7 -3.4582 | opp_overlap 440927 440932 440935, overlap 440925 440932 TGATGAAACAGCTAA GAGAATAATCAAGTT AATACA AACTTGACTATTCTC TCTTTAATCAGCTCA PMT9312_0467 440400 - 440954 + | guanylate kinase PMT9312_0468 441104 - 440970 - | photosystem I reaction center subunit IX PMT9312_0469 441688 - 441134 - | photosystem I PsaF protein (subunit III) TERM 349 441385 - 441373 - G 73 -7.7 -3.61398 | TTGTGCCTGGAATAA GAAGG TCT CCTTC ATGCCCTCTGTTTAA PMT9312_0470 441763 - 442833 + | O-sialoglycoprotein endopeptidase PMT9312_0471 442839 - 443015 + | high light inducible protein-like TERM 350 443841 - 443815 - g 84 -2.3 -6.17033 | opp_overlap 443838 443840 AAAAAAAATAAAAAA TGAAGCCTCAT TTGGC ATAGAGCTTCA AGTTACCCTTGGATT TERM 351 443909 - 443928 + G 87 -7.8 -4.77165 | opp_overlap 443901 443900, overlap 443901 443900 CCAGAATCAGGCTTG CCTGCTTC TGTC GCAGCAGG TTTTATTGTGGGCAA PMT9312_0472 443174 - 444373 + | CPA1 family Na+/H+ antiporter gltX 445809 - 444370 - | glutamyl-tRNA synthetase TERM 352 445850 - 445827 - R 84 -5.9 -5.24129 | TTTTTTTAGAAAAAA CGGGACCGA CGGGAT TCGAACCCG CAACTTCCGCCGTGA PMT9312_0474 446243 - 446049 - | hypothetical protein rplS 446875 - 446405 - | 50S ribosomal protein L19 TERM 353 446870 - 446882 + g 80 -5.5 -5.31275 | TTCCTGTTTCTCTTT GGCCA TTT TGGTC TTTTTTATCCTACAA PMT9312_0476 447216 - 446908 - | hypothetical protein PMT9312_0477 447308 - 448147 + | methionine aminopeptidase PMT9312_0478 448870 - 448151 - | short chain dehydrogenase TERM 354 448359 - 448369 + g 75 -2.6 -5.5353 | CCTAAGATGATTTTC TTAA TAA TTAA TTTTTTCTTAGTATC PMT9312_0479 449015 - 450124 + | BioD-like N-terminal domain of phosphotransacetylase PMT9312_0480 450150 - 450662 + | hypothetical protein PMT9312_0481 450730 - 451227 + | nucleotide-binding protein PMT9312_0482 451253 - 451462 + | hypothetical protein TERM 355 452317 - 452330 + G 71 -8.1 -3.28712 | opp_overlap 452308 AGTACACAAGTTGTA CCTGG CTTG CCAGG TTCTGAAGGAGGCAC PMT9312_0483 451573 - 452376 + | SPFH domain-containing protein/band 7 family protein TERM 356 452406 - 452442 + T 95 -11.2 -4.0014 | opp_overlap 452404 452409, overlap 452409 CTCCTACCTAAAATC TAACTAGTTTGATTTT CTTTA AAAAACAAACTAGTTA TTGGTTTTTTATAGT TERM 357 452409 - 452439 + T 83 -8.5 -4.08846 | opp_overlap 452404 452409, overlap 452406 CTACCTAAAATCTAA CTAGTTTGATTTT CTTTA AAAAACAAACTAG TTATTGGTTTTTTAT TERM 358 452439 - 452409 - T 77 -9.2 -3.38281 | opp_overlap 452409 452406, overlap 452404 CTACCTAAAATCTAA CTAGTTTGATTTTC TTT AAAAAACAAACTAG TTATTGGTTTTTTAT PMT9312_0484 453744 - 452440 - | glutamate-1-semialdehyde aminotransferase PMT9312_0485 454816 - 453971 - | exodeoxyribonuclease III PMT9312_0486 454888 - 455181 + | hypothetical protein PMT9312_0487 455209 - 455808 + | hypothetical protein TERM 359 455885 - 455904 + G 74 -8.6 -3.26444 | overlap 455893 GTTTTAATTGAATGT TCTCCAGG TATC TCTGGAGA TATGTTGTTAGGGGC TERM 360 456779 - 456757 - g 72 -5 -4.81551 | TATCTACATGAAAAA GAATAGAA TTGGATT TTCTATTC AAGCAATCTTACCAA TERM 361 456989 - 456979 - g 71 -5.4 -4.63172 | TATGAAACCAGAAAA TGAC GAA GTCA TGAGATTAAAACTAG PMT9312_0488 455861 - 457087 + | hypothetical protein TERM 362 457865 - 457888 + G 71 -5.2 -4.63542 | overlap 457867 TAGGTTTGGTAGTCC CATCAGCTCC AGGG GGAGTTGGCG TTTTTGAAGCTTGTC PMT9312_0489 457084 - 458040 + | hypothetical protein PMT9312_0490 459575 - 458037 - | putative iron ABC transporter PMT9312_0491 460690 - 459602 - | hypothetical protein phhB 461019 - 460729 - | pterin-4-alpha-carbinolamine dehydratase PMT9312_0493 461512 - 461057 - | hypothetical protein TERM 363 461804 - 461792 - g 72 -4.9 -4.77775 | opp_overlap 461792 ACTGCATAAAAGAAA TTCTT CAG AAGAA TTTTCTAATTTAATA TERM 364 462477 - 462502 + G 73 -8.3 -3.5518 | overlap 462478 CAAAGCCATCAATGT TTTGCTTGGCC TTTA GGTCAAGCAAC TTCTATGGGTATTCA TERM 365 462478 - 462501 + G 87 -11.8 -2.72626 | overlap 462477 AAAGCCATCAATGTT TTGCTTGGCC TTTA GGTCAAGCAA CTTCTATGGGTATTC TERM 366 462564 - 462578 + G 80 -5.8 -5.03747 | opp_overlap 462564, overlap 462566 ATAGTTAAATCCAAA TCTTTT TCA AAAAGA TTTTTTAAAAAATTT PMT9312_0494 461622 - 463127 + | thermostable carboxypeptidase 1 PMT9312_0495 463190 - 463777 + | putative inorganic pyrophosphatase hemC 464730 - 463780 - | porphobilinogen deaminase TERM 367 464506 - 464522 + g 71 -6.6 -4.06562 | ATGTACTGCTATATC TGCTTG GCCTA CAAGCA TTTGTGCTTCAAGTT PMT9312_0497 466008 - 464827 - | RNA polymerase sigma factor RpoD TERM 368 468070 - 468057 - g 74 -6.7 -4.29432 | opp_overlap 468057 CAAATGTTAGCAAAA GGGAT TGAT ATCCC TAATATTACTCTTTC PMT9312_0498 466332 - 468608 + | primosomal protein N' (replication factor Y) PMT9312_0499 469718 - 468609 - | hypothetical protein TERM 369 469033 - 469044 + g 77 -3 -5.65496 | ACTTGCTTTGTATTC TCTA GATC TAGA TTTTTATTTTTCATA TERM 370 469285 - 469298 + g 83 -6.7 -4.87133 | opp_overlap 469285 469284 ATGATCAGTGAAAAG CCCTT CTGA AAGGG TTTTGTTTCACCAGT TERM 371 469357 - 469385 + g 81 -3.1 -5.86976 | TTTTTCTCCAATACT TCTCTTTTTTTGC GAA GCGAGTTAAGAGA TTTTTTATTTTGTGA PMT9312_0500 470573 - 469722 - | acetylglutamate kinase TERM 372 470291 - 470302 + g 71 -3 -5.1675 | TTAGGACCATTTCAA CAAT ATCC ATTG TTTTTTGATCAGTAA TERM 373 470600 - 470583 - R 77 -5.7 -4.77438 | ATTCATTATTAAAAA TCAATAA AACT TTATTGA ATTAAGAAATTAGTT PMT9312_0501 471167 - 470637 - | hypothetical protein PMT9312_0502 471210 - 471392 + | hypothetical protein PMT9312_0503 471819 - 471394 - | hypothetical protein TERM 374 472415 - 472394 - g 80 -5.3 -5.28778 | ATCATGTATAAAAAA TTCAAATAT AGCG ATACTTGAA CCAAGGAAAAATGAG PMT9312_0504 471849 - 472649 + | precorrin-6X reductase-like PMT9312_0505 472656 - 472961 + | cutA1 divalent ion tolerance protein PMT9312_0506 473972 - 472968 - | carbohydrate kinase-like PMT9312_0507 475298 - 473988 - | adenylosuccinate synthetase PMT9312_0508 475817 - 475380 - | putative photosystem II reaction center Psb27 protein PMT9312_0509 477643 - 475841 - | prolyl-tRNA synthetase PMT9312_0510 477818 - 478168 + | resolvase TERM 375 478204 - 478176 - f 71 -7 -3.92467 | gap 1, opp_overlap 478175 478176 AAGAATAATTAAGAA GTCAATAAA-CAA TGTT TTGATTTATTGAC ATTTAGAATGTAGGA PMT9312_0511 478265 - 478522 + | reverse transcriptase (RNA-dependent)-like PMT9312_0512 478512 - 479066 + | inorganic pyrophosphatase PMT9312_0513 479063 - 479419 + | hypothetical protein PMT9312_0514 479449 - 480108 + | Signal peptidase I TERM 376 480172 - 480154 - T 73 -6 -4.60255 | opp_overlap 480147 ATAATTTTTTAAAAA GCGTTTTA ATT TAAAGCGC TCCAGAAGCAGTTGA PMT9312_0515 481492 - 480164 - | putative alpha-ribazole-5'-P phosphatase TERM 377 481170 - 481187 + g 74 -2.1 -5.68438 | TTTTTCCAAATAGGA TAAATTT CTGG AAATTTG TTTTTTATTTCATCA PMT9312_0516 481609 - 482970 + | membrane associated protease-like TERM 378 483097 - 483077 - g 74 -4.1 -5.31275 | opp_overlap 483078, overlap 483078 CCTTATGATAAAAAA TCTTTTTTT TAA AAAAAAAGT TTCATACCAAAGTCA TERM 379 483078 - 483096 + G 73 -7.6 -3.72893 | opp_overlap 483078 483077 CTTATGATAAAAAAT CTTTTTTT TAA AAAAAAAG TTTCATACCAAAGTC TERM 380 483096 - 483078 - g 74 -7.6 -3.78042 | opp_overlap 483078, overlap 483077 CTTATGATAAAAAAT CTTTTTTT TAA AAAAAAAG TTTCATACCAAAGTC TERM 381 483144 - 483130 - g 71 -2.2 -5.35222 | AAAATTCACAAAAAA TATCTA AAA TAAATA TCCAATTAATGCATA TERM 382 483422 - 483411 - g 77 -3 -5.5762 | overlap 483416 ATTAAAGATAAAAAA GAAA GTCT TTTC AAGAAAAATTTTAGA PMT9312_0517 483066 - 483485 + | hypothetical protein TERM 383 484127 - 484107 - g 71 -3.2 -5.13741 | gap 1, overlap 484110 484112 GTAATCTAATAAAAA GAGGAGGAG ATGG CACC-CCTC TGCCTGATAATTCAG TERM 384 484718 - 484703 - g 72 -4.8 -4.84539 | CAATTAAAGAGAAAA GATTTA TTCG TAAATC AATCAATAGAGCCTG PMT9312_0518 483485 - 485236 + | putative peptidoglycan synthetase (pbp transpeptidase domain) TERM 385 485534 - 485501 - g 74 -9.1 -3.06054 | opp_overlap 485500, overlap 485500 TAAAGCTATAGAAAG TTCAGAAAATACATT GCCC AATGGATTCTCTGAA ATTGAATTAATTAAA PMT9312_0519 485328 - 486329 + | transaldolase B PMT9312_0520 487485 - 486352 - | NAD binding site TERM 386 487230 - 487220 - G 70 -4.6 -4.8143 | TTAATAATCCAAAAA GGCG ATT CACC AGTAAGATCAGCGGT frr 488030 - 487482 - | ribosome recycling factor pyrH 488757 - 488053 - | uridylate kinase PMT9312_0523 489575 - 488883 - | cob(I)yrinic acid a,c-diamide adenosyltransferase PMT9312_0524 490778 - 489609 - | phage integrase family protein hemH 490844 - 492019 + | ferrochelatase TERM 387 492123 - 492147 + F 76 -6.7 -4.50627 | opp_overlap 492130 AAGTATTTAATTGAG TTTAATATTTA AAG TAAATATTGAA TTTCTTTAGTGACTC PMT9312_0526 492156 - 493919 + | acetolactate synthase 3 catalytic subunit TERM 388 494231 - 494214 - g 76 -7.1 -4.26019 | GAAGCAGAGTGAAAA TAAAACC TTTT GGTTTTA AAGATAATGTTTTGT PMT9312_0527 493985 - 494335 + | hypothetical protein PMT9312_0528 495140 - 494343 - | hypothetical protein PMT9312_0529 496053 - 495148 - | hypothetical protein PMT9312_0530 497264 - 496050 - | SSU ribosomal protein S1P PMT9312_0531 497331 - 498119 + | creatininase PMT9312_0532 498211 - 498966 + | hypothetical protein PMT9312_0533 499076 - 500116 + | hypothetical protein PMT9312_0534 500121 - 501128 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha PMT9312_0535 501103 - 501837 + | short chain dehydrogenase TERM 389 502073 - 502055 - g 73 -7.5 -3.70925 | overlap 502051 TTACTAATAAACTAA TCTCTGA AATTA TCAGAGA CAGAATTAAGAATTC TERM 390 502090 - 502074 - g 70 -8.1 -2.99473 | overlap 502051 502076 502083 TGAAATTATCAGAGA CAGAATT AAG AATTCTG GGACAAGATTCAGTG PMT9312_0536 501991 - 502731 + | GTP cyclohydrolase TERM 391 502752 - 502762 + T 72 -3.2 -5.30686 | TTTTAAAAACTTAAT TAGG GCC CCTG TTTTTTCTAGATCTT PMT9312_0537 503384 - 502728 - | phosphoribosylanthranilate isomerase TERM 392 503054 - 503068 + g 91 -7.2 -5.15969 | TGAAGGCCTTCCATA TTCCAA TAT TTGGAA TTTTTTCCCTTAACC PMT9312_0538 503440 - 504663 + | hypothetical protein PMT9312_0539 505379 - 504693 - | protein ligase TERM 393 504777 - 504760 - G 70 -7.1 -3.58305 | opp_overlap 504760 AATGAATTTCTTAAA TGATGAA CTAT TTCATCA TTTGTAAGATCTAGA TERM 394 504760 - 504777 + g 72 -7.1 -3.91144 | opp_overlap 504760 AATGAATTTCTTAAA TGATGAA CTAT TTCATCA TTTGTAAGATCTAGA psaM 505518 - 505622 + | photosystem I reaction center subunit XII PMT9312_0541 505704 - 506051 + | hypothetical protein TERM 395 506426 - 506410 - g 72 -7.3 -3.94853 | overlap 506424 TAAGCCAAGACTAAA GAGACCT GAA AGATCTC CACAGGGTTATGAAA PMT9312_0542 506105 - 507109 + | protochlorophyllide oxidoreductase chlL 508003 - 507116 - | protochlorophyllide reductase iron-sulfur ATP-binding protein PMT9312_0544 509773 - 508196 - | light-independent protochlorophyllide reductase subunit B TERM 396 509289 - 509269 - G 100 -12.7 -3.38207 | opp_overlap 509267 GACCTAATATATTAA CTTTAGGTC TTC GACCTAAAG ACTTCCATCTTTGAG TERM 397 509614 - 509628 + g 84 -10 -3.5361 | opp_overlap 509616 TTGTATAAGTTACAG GAGGTC TCT GACCTC TTCTCTCGATCATTG PMT9312_0545 511034 - 509778 - | light-independent protochlorophyllide reductase subunit N TERM 398 510871 - 510845 - G 71 -8 -3.28712 | overlap 510830 510847 CTTTCTCTTCGAGAA TAGCTGTACCAA ATC TTGGTTCAGCAA AAATCATTACCCCTG TERM 399 510869 - 510847 - G 83 -10.6 -3.21276 | overlap 510845 TTCTCTTCGAGAATA GCTGTACCAA ATC TTGGTTCAGC AAAAATCATTACCCC PMT9312_0546 511560 - 511192 - | hypothetical protein TERM 400 511520 - 511539 + g 79 -2.8 -5.79526 | overlap 511523 GTTAATTCTTTTTCA GTACCAGA AACA TTTGGTTC TTTTTTTTGAGATGT TERM 401 512136 - 512126 - g 71 -3.2 -5.18715 | AGAAAAAGAACAAAA CCTG CCA CAAG TTGGACTGAAGTTAT PMT9312_0547 511658 - 512428 + | hypothetical protein PMT9312_0548 513022 - 512438 - | HAM1 family protein TERM 402 512988 - 513000 + g 73 -7.7 -3.63515 | GATACCTTTCTTTGG TTGCC ACT GGCAA TTGTTAGAACTGGAA PMT9312_0549 513352 - 513663 + | carboxysome shell protein CsoS1 TERM 403 513976 - 513995 + G 70 -4.2 -5.10601 | TATCGAATTGAAGAC GTTCCAGG AGAT CCTGAAGC TTTTTATGCTTTTAT rbcL 513733 - 515148 + | ribulose bisophosphate carboxylase TERM 404 515187 - 515163 - f 85 -8.7 -4.25676 | opp_overlap 515162 AACCAAATTTCAAAA TTGAGGAGA TTCTTTT TCTCCTCAA ACTTCTACAAATCTC PMT9312_0551 515243 - 515584 + | ribulose bisphosphate carboxylase, small chain TERM 405 515607 - 515632 + F 100 -10.6 -5.75945 | opp_overlap 515606 515604 515607 TTATGTAGTAAATAT CTTTCTCCAA AAAAAA TTGGAGAAAG TTTTTTTTAAAGAGT TERM 406 515632 - 515607 - f 82 -10.6 -2.67667 | opp_overlap 515607, overlap 515606 515604 TTATGTAGTAAATAT CTTTCTCCAA AAAAAA TTGGAGAAAG TTTTTTTTAAAGAGT TERM 407 516881 - 516857 - g 74 -8.7 -3.20078 | GACTGGAGATCAATA TCTTGGATCTG AGC CAAATCCAAAA GGTAAAGCATTTGAA PMT9312_0552 515664 - 517964 + | carboxysome shell protein CsoS2 PMT9312_0553 517972 - 519501 + | carboxysome shell protein CsoS3 PMT9312_0554 519504 - 519755 + | putative carboxysome peptide A PMT9312_0555 519775 - 520023 + | putative carboxysome peptide B TERM 408 520219 - 520208 - g 70 -4.4 -4.9138 | ATTATGTAAAGAAAA GGAT ATCT ATCC AAATATAAGCTTTGG PMT9312_0556 520098 - 520337 + | hypothetical protein PMT9312_0557 520571 - 520344 - | hypothetical protein PMT9312_0558 521049 - 520657 - | endoribonuclease L-PSP PMT9312_0559 521814 - 521074 - | hydroxyacylglutathione hydrolase hisG 521854 - 522492 + | ATP phosphoribosyltransferase catalytic subunit PMT9312_0561 522505 - 524301 + | multidrug ABC transporter PMT9312_0562 524301 - 524831 + | putative acetyltransferase PMT9312_0563 525515 - 524832 - | hypothetical protein PMT9312_0564 526132 - 525521 - | hypothetical protein TERM 409 526538 - 526520 - g 71 -3.1 -5.13521 | overlap 526522 AAACTATCGAAAAAA CTGCAAA AGAAA TTTGCGG CTATGATGTAAAAGT TERM 410 527194 - 527216 + G 71 -7.6 -3.38812 | opp_overlap 527191, overlap 527192 527195 GCAGATATTCAACCG CCCGACCTTG AGA CAAGGACGGC TATTCTTCAAAAAAA TERM 411 527195 - 527215 + G 82 -11.1 -2.63073 | opp_overlap 527191, overlap 527194 527192 CAGATATTCAACCGC CCGACCTTG AGA CAAGGACGG CTATTCTTCAAAAAA TERM 412 527431 - 527405 - g 73 -8.1 -3.40597 | opp_overlap 527378 527403 527402, overlap 527403 TGCTTGATCCAAATA GTGTTGGAGTA GTTGT TACTCCAAAAC AAGTTATTAACAAAG dnaA 526327 - 527721 + | chromosomal replication initiation protein TERM 413 527732 - 527715 - T 70 -2.1 -5.49234 | AGATTCAAGAAAAAA TTTATAA TTAA CTATAAA ATAAAATTTCTAGGA PMT9312_0566 528952 - 527726 - | glutathione S-transferase TERM 414 528622 - 528612 - G 70 -4 -5.02074 | opp_overlap 528597, overlap 528597 TCATTTTCTAAAAAA GATA TGA TATC ATCGCTTTCCGTTAT TERM 415 528661 - 528675 + g 71 -8.6 -2.93047 | overlap 528660 528663 CTTTGAATTCAATTG CAGGTA ATT TACCTG ATTTAACTTTATGAA TERM 416 529851 - 529831 - g 76 -8.5 -3.54424 | TCTTATCCCTTTAAA TTTAGATTT TTT AAATCTAAA GATGGATGGCCAATA PMT9312_0567 528989 - 530368 + | NADPH-glutathione reductase PMT9312_0568 531450 - 530371 - | putative CaCA family sodium/calcium exchanger TERM 417 530691 - 530669 - G 81 -10 -3.08977 | opp_overlap 530672, overlap 530666 530672 CCTGAAAAAATACTA CAACTTCCAA GAA TTAGAAGTTG ATTGAGCAAATTGCT PMT9312_0569 531569 - 532618 + | dihydroorotase PMT9312_0570 532887 - 533120 + | NADH dehydrogenase subunit NdhL (ndhL) PMT9312_0571 533125 - 533445 + | hypothetical protein trpA 533472 - 534314 + | tryptophan synthase subunit alpha PMT9312_0573 534747 - 534391 - | transcriptional regulator AbrB PMT9312_0574 534846 - 535115 + | YciI-like protein PMT9312_0575 535667 - 535347 - | hypothetical protein PMT9312_0576 536036 - 535668 - | hypothetical protein PMT9312_0577 536997 - 536074 - | type II alternative sigma-70 family RNA polymerase sigma factor TERM 418 537057 - 537087 + r 75 -7.2 -4.12043 | opp_overlap 537063, overlap 537060 AATAAGCCATACATG TAATAATTAATTAA TAT TTAATTAATAATTA TTATTTAGTTAATTA TERM 419 537150 - 537162 + r 79 -3.5 -5.66229 | opp_overlap 537138 537150 TCATAAATTATAAAT TTAAA TTA TTTAA TTTTTTCTTCTTGAT PMT9312_0578 537818 - 537159 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 420 537680 - 537698 + g 74 -6.8 -4.24342 | overlap 537683 CGTTATTGGTTTCAA GAGTCATT GTC AATGATTC TTTGTTCATCCAAGC PMT9312_0579 537882 - 538352 + | 6-pyruvoyl-tetrahydropterin synthase PMT9312_0580 540984 - 538402 - | ATPase TERM 421 539964 - 539978 + g 75 -2.8 -5.54907 | ATACAGTATCATCTA TTGAAG GAG CATCAA TTTTTATTTTCTGAA TERM 422 540982 - 540936 - G 100 -12.7 -4.72272 | gap 1, opp_overlap 540941 540943, overlap 540941 540943 TTTCTTTAGCAAAAA TAAAACAGTTCCAAGCAGAATT TGAA AATTC-GCTTGGAACTATTTTC ATCAATCAAAATATT TERM 423 540941 - 540977 + g 95 -10.4 -4.2828 | gap 1, opp_overlap 540936 540941 540943, overlap 540943 TTAGCAAAAATAAAA CAGTTCCAAGCAGAATT TGAA AATTC-GCTTGGAACTA TTTTCATCAATCAAA TERM 424 540977 - 540941 - G 100 -12.6 -5.3104 | gap 1, opp_overlap 540941 540943, overlap 540936 540943 TTAGCAAAAATAAAA CAGTTCCAAGCAGAATT TGAA AATTC-GCTTGGAACTA TTTTCATCAATCAAA TERM 425 540975 - 540943 - G 100 -13 -4.26857 | gap 1, opp_overlap 540943 540941, overlap 540941 540936 AGCAAAAATAAAACA GTTCCAAGCAGAATT TGAA AATTC-GCTTGGAAC TATTTTCATCAATCA TERM 426 540943 - 540975 + g 100 -13 -3.745 | gap 1, opp_overlap 540941 540936 540943, overlap 540941 AGCAAAAATAAAACA GTTCCAAGCAGAATT TGAA AATTC-GCTTGGAAC TATTTTCATCAATCA PMT9312_0581 541393 - 541043 - | plastocyanin PMT9312_0582 542436 - 541453 - | hypothetical protein TERM 427 542467 - 542487 + r 93 -8.4 -4.78237 | GTTAGTTTTTTCCCA TGCTCAAA AAATG TTTGAGCA TTTTCTTCTGGAGTG hemE 543485 - 542445 - | uroporphyrinogen decarboxylase PMT9312_0584 545873 - 543609 - | glycogen branching enzyme TERM 428 545572 - 545588 + g 70 -7.3 -3.67297 | opp_overlap 545574, overlap 545574 ATCCACTCTTCTATA TATGACC AGG GGTCATG TTGTGTATGTGTGAT TERM 429 545574 - 545586 + g 71 -7.7 -3.40967 | opp_overlap 545574, overlap 545572 CCACTCTTCTATATA TGACC AGG GGTCA TGTTGTGTATGTGTG PMT9312_0585 547506 - 545926 - | hypothetical protein PMT9312_0586 547780 - 547514 - | hypothetical protein PMT9312_0587 548240 - 547845 - | hypothetical protein TERM 430 548029 - 548042 + g 70 -3.9 -5.03314 | overlap 548025 TATCCTTGCGGTGGA GAAAT TCCA ATTTC TTTTTTAAAAATAGC PMT9312_0588 548695 - 548252 - | hypothetical protein TERM 431 548781 - 548770 - H 75 -3 -5.47399 | opp_overlap 548770 CTAACTTGAAAAAAA TTAG ATCT CTAA ATTTAAATACAAAAA TERM 432 549042 - 549052 + G 78 -6.8 -4.39347 | AAAAATTTATACGTA GGCA TTA TGCC TTTTAGATCTTTTTT PMT9312_0589 548817 - 552899 + | hypothetical protein PMT9312_0590 552967 - 554277 + | glutamate-5-semialdehyde dehydrogenase PMT9312_0591 554289 - 554651 + | dihydroneopterin aldolase TERM 433 554701 - 554711 + G 81 -4 -5.60689 | TCATGGTCTTTGGAA TACT TCA AGTA TTTTTTCTTCTATCA PMT9312_0592 554657 - 555250 + | lipase family protein PMT9312_0593 557330 - 555243 - | peptidase family M3 PMT9312_0594 558889 - 557351 - | NAD(P)H-quinone oxidoreductase subunit 4 TERM 434 557858 - 557843 - G 74 -3.2 -5.4505 | GCCTGTAACAAAAAA CATAGC TGCT GCAATG AGTCCGTGGCTGATC TERM 435 558833 - 558819 - G 95 -8.6 -5.15969 | TTCGAACTCAAAAAA GGCATT ATT AATGCC CCAATTAAAGGTAGT PMT9312_0595 559915 - 558968 - | homoserine kinase PMT9312_0596 560959 - 559922 - | glucokinase PMT9312_0597 562886 - 560970 - | threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase TERM 436 562709 - 562728 + g 72 -3.6 -5.24129 | opp_overlap 562709, overlap 562702 TATCTTTTGATGTAA TGATTACA ACTT TGGAATCA TTTTTTATAGGGAGC PMT9312_0598 563906 - 562890 - | tryptophanyl-tRNA synthetase PMT9312_0599 564318 - 563896 - | hypothetical protein TERM 437 564017 - 564031 + g 75 -2.8 -5.54403 | GGTTTTTGTGATTGT CTATTC GGA GAAGAG TTTTTGTTATTTTTT PMT9312_0600 564481 - 565815 + | hypothetical protein PMT9312_0601 565835 - 566743 + | ABC transporter substrate-binding protein PMT9312_0602 566747 - 567511 + | ABC transporter ATP-binding protein PMT9312_0603 567524 - 568399 + | ABC transporter TERM 438 569212 - 569223 + G 78 -5.8 -4.85599 | TGGAGATCTCATTTC GGGA TTTA TCCC TTTTTATGGGATGAA PMT9312_0604 568399 - 569565 + | hypothetical protein PMT9312_0605 569908 - 569573 - | hypothetical protein PMT9312_0606 570538 - 569954 - | leader peptidase I TERM 439 570983 - 570967 - g 79 -8.1 -4.04326 | opp_overlap 570966 TAATCAAACAGTAAA TCAAGAA GAT TTCTTGA GTTCAGTCTGCAGAA TERM 440 571386 - 571361 - g 89 -10.5 -3.78785 | opp_overlap 571366 TTAGAAAAATTACAA GCAATTACTGG TTGG CCAGTATTTGC TGATCCTGTTTCATG TERM 441 571366 - 571381 + G 74 -7.6 -3.81689 | opp_overlap 571361 AAAATTACAAGCAAT TACTGG TTGG CCAGTA TTTGCTGATCCTGTT TERM 442 572168 - 572144 - g 74 -2.3 -5.65513 | overlap 572136 572145 GATGAATTAAAAAAA CTATTTCTT ATGCCTA AAGAAATAA ACTGGAAAAAACTCG PMT9312_0607 570590 - 572353 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase PMT9312_0608 572390 - 573247 + | naphthoate synthase TERM 443 573762 - 573750 - g 73 -7.7 -3.76167 | overlap 573748 TCATAATTTAAAATA CCAAG GGC CTTGG AGATGGAAATTAGAA TERM 444 573903 - 573890 - g 79 -6.7 -4.58773 | CTGATGAAATCAAAA CCCAT GAAT ATGGG GAAAGCCTTGAAGGA glgA 573283 - 574734 + | glycogen synthase PMT9312_0610 574747 - 576120 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase PMT9312_0611 577471 - 576122 - | glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase PMT9312_0612 578401 - 577496 - | hypothetical protein PMT9312_0613 579724 - 578414 - | EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PMT9312_0614 579917 - 580585 + | 2-phosphosulfolactate phosphatase PMT9312_0615 580616 - 581443 + | putative nitrilase TERM 445 582251 - 582261 + G 71 -5.4 -4.55128 | GAAAGGATATTAATG GGTT GGA AACC TTTTACTTTAGAGGT PMT9312_0616 581443 - 582528 + | cell wall hydrolase/autolysin TERM 446 582679 - 582697 + G 72 -2.5 -5.42259 | AAGAGATCAGACTAA TTGCAAA AGAGA TTTGTAA TTTTTTTGAAGATAA PMT9312_0617 582525 - 583319 + | glutamate racemase PMT9312_0618 583347 - 584318 + | polyprenyl synthetase; solanesyl diphosphate synthase (sds) TERM 447 586082 - 586099 + G 77 -9.1 -3.28712 | opp_overlap 586081 586082 586084 TGGTAAGTCATAAAT CAGTGGC TGAA GCCGCTG TTGTGGGAAGGAGAG PMT9312_0619 584413 - 586395 + | acetyl-coenzyme A synthetase PMT9312_0620 587114 - 586392 - | hypothetical protein PMT9312_0621 587244 - 588023 + | putative DNA polymerase III, epsilon subunit PMT9312_0622 588476 - 588054 - | hypothetical protein TERM 448 589144 - 589132 - g 85 -4.9 -5.60993 | GTGGCTAGAAAAAAA TAAAG ATT CTTTA GATTTAGATTCTCAG TERM 449 589187 - 589177 - g 80 -5.4 -5.2204 | opp_overlap 589177 TAGAATCAATAAAAA TCCT TTA AGGA TTTTAGACTCTAAGA TERM 450 589233 - 589220 - g 70 -4.5 -4.7923 | ATGCAAACAAAGAAA GCGCT TGAA AACGC TCCAATATTATTTAA hisS 588575 - 589855 + | histidyl-tRNA synthetase PMT9312_0624 589870 - 590145 + | hypothetical protein PMT9312_0625 590148 - 590447 + | hypothetical protein TERM 451 590740 - 590725 - g 80 -5.4 -5.24129 | CTTGGTCAGAAAAAA CCTTGG AAGC CCAAAG CACTTTATAATATAG PMT9312_0626 590584 - 590817 + | hypothetical protein TERM 452 591222 - 591242 + F 78 -6.9 -4.57569 | opp_overlap 591222, overlap 591241 ATTTCACTGCTTAAA TCTAACTTC TTT GGGGTTAGA TTTTTAAGGAAATCA PMT9312_0627 591367 - 592425 + | light-harvesting complex protein TERM 453 592454 - 592432 - f 76 -9.4 -2.88617 | overlap 592422 AAGGACTAAATATTA TTATATTTAG CAA CTAAATATAA AGGTCTCAATTTTAT TERM 454 592456 - 592476 + F 100 -10.5 -5.63517 | opp_overlap 592456 GCAACTAAATATAAA GGTCTCAAT TTT ATTGAGGCC TTTTTTATTTGAAAA TERM 455 592476 - 592456 - f 85 -8.3 -4.40184 | opp_overlap 592456 GCAACTAAATATAAA GGTCTCAAT TTT ATTGAGGCC TTTTTTATTTGAAAA PMT9312_0628 592523 - 593908 + | sodium/solute symporter family protein PMT9312_0629 593947 - 594204 + | hypothetical protein PMT9312_0630 594860 - 594201 - | glutathione S-transferase TERM 456 595281 - 595297 + G 71 -8.1 -3.21474 | opp_overlap 595279 595278, overlap 595279 TAATTATTTAAATTT TGGATTT TTA AAATCCA TATCTTATGCATTTG PMT9312_0631 594934 - 595476 + | NADH-ubiquinone/plastoquinone-like PMT9312_0632 596180 - 595473 - | short-chain dehydrogenase/reductase PMT9312_0633 597471 - 596188 - | lycopene cyclase (CrtL-type) TERM 457 597014 - 597000 - G 95 -8.6 -5.13741 | TTAATTTAAGAAAAA CAGGAT CAT ATCCTG TCGCATCTACTACTA TERM 458 597871 - 597860 - g 74 -3 -5.42862 | opp_overlap 597860 ATATTTTGAAAAAAA TTAC CTTA GTAA ATATTTAAATATTAT PMT9312_0634 597696 - 598697 + | putative light-dependent protochlorophyllide oxido-reductase PMT9312_0635 599699 - 598668 - | small mechanosensitive ion channel TERM 459 599292 - 599280 - G 75 -4.9 -5.06816 | overlap 599283 ATTTTGCAAGAAAAA TATTG AAC CAATA GTCCATGTTAATGCT PMT9312_0636 600344 - 599778 - | isochorismatase hydrolase family protein PMT9312_0637 600466 - 600918 + | ferric uptake regulator family protein PMT9312_0638 601857 - 600925 - | hypothetical protein PMT9312_0639 603125 - 601902 - | putative glucosylglycerolphosphate phosphatase TERM 460 604682 - 604669 - g 74 -3.9 -5.28826 | AAACTTTACAAAAAA TTGTT TATT AACAA AGAGAAAAATGATAT PMT9312_0640 603280 - 604788 + | hypothetical protein TERM 461 605282 - 605267 - g 72 -4.8 -4.87318 | TTTAAAAGCCAAAAA TCTATT TAAG AATAGA AAGGATCTCATAAAT TERM 462 605310 - 605300 - g 71 -6.8 -4.07877 | opp_overlap 605299, overlap 605301 GGATCTCATAAATAA GGCT TTT AGCC AATTTGACGCTAAAA PMT9312_0641 604881 - 605540 + | hypothetical protein PMT9312_0642 605612 - 606940 + | putative O-Acetyl homoserine sulfhydrylase TERM 463 607735 - 607722 - gT 95 -4.5 -6.32216 | AGAGATAAAAAAAAA GGAGA TGTT CCTCC TCCTGAAAATTTTGA PMT9312_0643 606894 - 607844 + | putative homoserine O-succinyltransferase PMT9312_0644 609415 - 607850 - | putative sulfate transporter TERM 464 608187 - 608167 - G 76 -6.2 -4.56597 | overlap 608170 608185 CTTTTCTGCTAAAAA GAATTGCA GCTAA TGCAACTC CTGCAATAACTCCAA PMT9312_0645 610723 - 609446 - | FAD linked oxidase, N-terminal PMT9312_0646 610765 - 611904 + | hypothetical protein TERM 465 612076 - 612093 + F 93 -2.7 -6.3578 | overlap 612077 AATAAAAAACAGGAC TTCAACA TTAT TGTTGAC TTTTTTTTTTGCCCT TERM 466 612077 - 612092 + F 74 -6.2 -4.39028 | overlap 612076 ATAAAAAACAGGACT TCAACA TTAT TGTTGA CTTTTTTTTTTGCCC PMT9312_0647 612255 - 612512 + | hypothetical protein PMT9312_0648 614139 - 612499 - | glucose-methanol-choline (GMC) oxidoreductase:NAD binding site TERM 467 613122 - 613166 + g 85 -8.1 -4.59773 | opp_overlap 613112, overlap 613117 613128 AGAAGCTGCCTGCTC CAGAAAGATCAGGAGGATTAT CTA ATGGTTTTCCTGATATTTTTG TTTTTGGGACTGAAA TERM 468 613128 - 613160 + g 79 -3.5 -5.61881 | overlap 613117 613122 TGCCTGCTCCAGAAA GATCAGGAGGATTAT CTA ATGGTTTTCCTGATA TTTTTGTTTTTGGGA TERM 469 613197 - 613186 - G 74 -3 -5.47218 | opp_overlap 613186 TGGGACTGAAAAAAA TCTA CAGA TAGA TATATGGTCCATGAG TERM 470 613308 - 613347 + g 75 -9.6 -2.81193 | opp_overlap 613317 613320, overlap 613317 TTGAAATTGTTGATG CGCAAAGAAGGATTAAAT CACA ATTTAATTCTTTTTTGCA TCCATTTTCTAGGTT TERM 471 613317 - 613338 + g 76 -5.3 -5.10497 | opp_overlap 613317 613320, overlap 613308 TTGATGCGCAAAGAA GGATTAAAT CACA ATTTAATTC TTTTTTGCATCCATT TERM 472 614664 - 614652 - g 78 -9.1 -3.56594 | GGAAATTTTGTGAAA GTGCC TCT GGCAC TAATCCAATCACAAA PMT9312_0649 614246 - 614719 + | pentapeptide repeat-containing protein PMT9312_0650 615114 - 614722 - | LEM domain-containing protein PMT9312_0651 615614 - 615117 - | VHS domain-containing protein TERM 473 615411 - 615448 + g 70 -4.3 -4.90013 | opp_overlap 615407 615418, overlap 615403 615399 ATCGAGACTAATTTC TTTAGAAGAAATAGTTT CTTT AACCTTTTTCTTCAAAA TTTTTACTTGGCTTA PMT9312_0652 616295 - 615906 - | glyoxalase I TERM 474 615965 - 615975 + g 76 -5.4 -4.99056 | opp_overlap 615965 615963 CAATAAAAGCCAAGA CAGT TGT ACTG TTTTTCATTGTCTTA TERM 475 615995 - 616014 + g 74 -6.5 -4.35644 | TCATTGTCTTAGGTT TGGTTGT TACTTT ACAACCA TTATTTTCTAGTCCT TERM 476 616735 - 616755 + G 72 -3.3 -5.19879 | TGAGAATATTCCCCA TAGTTGAAC TGG GCTCAATTA TTTTTATATTTACAC PMT9312_0653 616428 - 616862 + | hypothetical protein PMT9312_0654 617222 - 616893 - | hypothetical protein PMT9312_0655 617814 - 617230 - | hypothetical protein TERM 477 617708 - 617691 - G 72 -2.7 -5.47399 | opp_overlap 617691 CTAATCCTAAAAAAA TAAAACC AAAA GGTATTA ATTTGTTCTTACTTA PMT9312_1811 617872 - 618129 + | hypothetical protein TERM 478 618186 - 618198 + T 76 -6.3 -4.55689 | opp_overlap 618186 TGACGGAATAATTTA GTCAA AGC TTGAC TTTTATCTAAGTAAT PMT9312_0657 618925 - 618245 - | hypothetical protein TERM 479 618494 - 618484 - G 76 -5.4 -4.99947 | TCCAACCAAATAAAA TGCA AAT TGCA ATCAGAATAGGATCA TERM 480 618898 - 618909 + g 72 -5.8 -4.5287 | CTTCTGGAGAGATCT CACC CCAA GGTG TTTTAATTAATTTCA PMT9312_0658 619583 - 619035 - | hypothetical protein TERM 481 619386 - 619371 - G 82 -4.8 -5.46698 | TTTAAAACCAAAAAA CTTTAT CAAT ATAAAG TCAAATACGATGGAT PMT9312_0659 620311 - 619565 - | hypothetical protein TERM 482 619698 - 619715 + g 75 -2.7 -5.53288 | opp_overlap 619698 CCGCTCAATAAATAA GAAAATG GCAT CATATTC TTTTTTTGAATTAGA TERM 483 620024 - 620035 + g 77 -3 -5.60864 | GATTAAATTTGATAT TTTG TTTT CAAA TTTTTTTCCTATATC TERM 484 621382 - 621415 + r 93 -12.1 -3.62597 | gap 1, opp_overlap 621392, overlap 621385 621392 TAGTCTAATATTGGA TATTAAAAAAGCCACT TTT AGTGGCTTTTTTA-TA TTATTGGAAAATGAA TERM 485 621385 - 621413 + r 100 -16.3 -3.39288 | opp_overlap 621392, overlap 621382 621392 TCTAATATTGGATAT TAAAAAAGCCACT TTT AGTGGCTTTTTTA TATTATTGGAAAATG TERM 486 621392 - 621406 + r 100 -10 -5.55695 | opp_overlap 621392, overlap 621385 621382 TTGGATATTAAAAAA GCCACT TTT AGTGGC TTTTTTATATTATTG TERM 487 621406 - 621392 - R 100 -10 -5.21709 | opp_overlap 621392 621385 621382 TTGGATATTAAAAAA GCCACT TTT AGTGGC TTTTTTATATTATTG TERM 488 621965 - 621984 + r 71 -5 -4.78839 | GAAAAAGTTCAGTTG GTAAACGC CTTG GCTTTTAC TTTTATTATGGGATT TERM 489 622060 - 622084 + r 77 -5.1 -5.01845 | ATTATTTAATTTTTG CAAAGCATTAA TTT TTGATTCTTTG TTTTTAATTATTGTC PMT9312_0660 622308 - 622042 - | RNA recognition motif-containing protein TERM 490 622171 - 622150 - G 81 -8.9 -3.86897 | opp_overlap 622150 TCTATTTTTTAGAAA TCTACATAT ATAT ATATGTAGA TTTTTTTCATTTTTG TERM 491 622150 - 622171 + g 100 -8.9 -5.85011 | opp_overlap 622150 TCTATTTTTTAGAAA TCTACATAT ATAT ATATGTAGA TTTTTTTCATTTTTG PMT9312_0661 624730 - 622397 - | ribonucleotide reductase (class II) TERM 492 624646 - 624657 + g 74 -5.8 -4.58663 | opp_overlap 624646 AAAAAACAGGATAAG CAGC TGGT GCTG TTTTTGGAAAATCAT PMT9312_0662 624862 - 625557 + | hypothetical protein TERM 493 626433 - 626406 - g 81 -10.1 -3.02043 | opp_overlap 626396, overlap 626431 AATTTTGGTGTAAGA CCATTTTTAGA TAGTTT TCTAAAAATGG CTCAAAAACCAACGT prfC 625590 - 627227 + | peptide chain release factor 3 TERM 494 627661 - 627674 + G 71 -5.3 -4.62313 | opp_overlap 627661 ACCTCTCAATAAAAT TATCC GCCG GGATA TTATTTTTAATTTTG PMT9312_0664 627279 - 627953 + | hypothetical protein PMT9312_0665 628856 - 627954 - | Hsp33 protein TERM 495 628147 - 628181 + g 73 -8.1 -3.49065 | overlap 628146 TCTTGGGAACGAGCT TTTTCAGATATTGAT TTATC GTCAATATCTGGGAA TATATTTCTTATTAA PMT9312_0666 629493 - 628846 - | ABC transporter ATP-binding protein PMT9312_0667 629577 - 630020 + | hypothetical protein TERM 496 630759 - 630784 + G 73 -7.7 -3.66178 | opp_overlap 630763 AGTATTAACGCATCA TCAATTCTCAA TCAG TGGAGAATTGA TTTGAAATTAAGGAA PMT9312_0668 630030 - 630803 + | hypothetical protein TERM 497 631186 - 631164 - g 73 -9.2 -2.93891 | ATGTTTAAAATAGGA TTTGCTGCAA GTT TTGCTGCAAA GTTGGCGGATACTTT PMT9312_0669 630810 - 631547 + | hypothetical protein PMT9312_0670 632213 - 631569 - | hypothetical protein PMT9312_0671 633765 - 632263 - | putative phosphonate ABC transporter PMT9312_0672 634510 - 633770 - | ATPase PMT9312_0673 635400 - 634507 - | phosphonate-binding periplasmic protein PMT9312_0674 636592 - 635414 - | L-aspartate aminotransferase TERM 498 637123 - 637163 + G 87 -8.5 -4.23104 | opp_overlap 637126, overlap 637126 GGTCAATGGATTAAA AAAGATGGGAGAGAAATTA TGG TAATTTTTCATCCATCTTA TTTGTTGAGATTTCC TERM 499 637126 - 637160 + G 93 -10.2 -4.2204 | opp_overlap 637126, overlap 637123 CAATGGATTAAAAAA GATGGGAGAGAAATTA TGG TAATTTTTCATCCATC TTATTTGTTGAGATT TERM 500 637160 - 637126 - g 83 -5.8 -5.18357 | opp_overlap 637126 637123 CAATGGATTAAAAAA GATGGGAGAGAAATTA TGG TAATTTTTCATCCATC TTATTTGTTGAGATT PMT9312_0675 636754 - 637257 + | phage SPO1 DNA polymerase-related protein ispG 637292 - 638509 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 501 639704 - 639688 - g 82 -9.5 -3.65696 | ACTGACATAAACGAA TCTGGAA TTA TTCCAGA CATAGAAGTGAAAAT PMT9312_0677 638572 - 639906 + | carboxyl-terminal protease PMT9312_0678 640817 - 639903 - | quinolinate synthetase PMT9312_0679 640981 - 641754 + | putative transcripton factor PMT9312_0680 642575 - 641778 - | hypothetical protein PMT9312_0681 642607 - 643797 + | hypothetical protein PMT9312_0682 644885 - 643794 - | 3-dehydroquinate synthase TERM 502 645065 - 645049 - g 93 -8.1 -5.16841 | opp_overlap 645052 CGATATTAAGAAAAA TTATTCC CTA GGAATAA TTGGAGGCGGTCAAC PMT9312_0683 645011 - 646201 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 503 646477 - 646489 + T 71 -4.9 -4.84359 | TGCCTTACCAGTACT GTATT TGT AATAC TTTTTATACAAATGA TERM 504 647163 - 647138 - T 100 -6.9 -6.37666 | opp_overlap 647138 AGAAAACAAAAAAAA GCTCGCTTATA TCCC TAAAAGCAAGC TCTCATGACGATTTG PMT9312_0685 647695 - 647468 - | M protein-like PMT9312_0686 647825 - 647697 - | high light inducible protein-like PMT9312_0687 648395 - 648255 - | high light inducible protein-like PMT9312_0688 648502 - 648395 - | high light inducible protein-like TERM 505 648764 - 648781 + H 83 -3.5 -5.95539 | TAATAAGCGGTGCAA GTAGTAA GAGT TTATTAC TTTTTTTATTTAAAC TERM 506 649345 - 649328 - g 75 -2.7 -5.64321 | opp_overlap 649328 AGAAGAAAATAAAAA GGAAGAA AAAT TTATTCC CTCTTTTTTAGATCG PMT9312_0689 648888 - 649382 + | hypothetical protein PMT9312_0690 649715 - 649383 - | hypothetical protein TERM 507 650379 - 650357 - g 80 -7.1 -4.61199 | overlap 650359 AGTTGAGAGAGAAAA TCTCAGCAA TAAAT TTGCTGAAA TTAAGGAGCAATTGA PMT9312_0691 649863 - 651461 + | hypothetical protein TERM 508 651476 - 651464 - T 70 -3.5 -5.26247 | opp_overlap 651464 651473, overlap 651473 TCAAAATAAATAAAA TTAAA AAG TTTAA TCTTTAATAACTTTT PMT9312_0692 651884 - 651696 - | hypothetical protein TERM 509 651794 - 651806 + g 80 -7.7 -4.18018 | TCAATCCTTTGACAC CTCCT ATC AGGAG TTTTGCATCAGAAGG TERM 510 652151 - 652138 - H 74 -5.3 -4.83169 | overlap 652140 ACTTTTCCATAAAAA GAGAA GGTT TTCTC CCTCCAATTTTAAAT PMT9312_0693 652279 - 652578 + | hypothetical protein TERM 511 652621 - 652605 - T 70 -3.7 -5.20735 | overlap 652615 CCAATAAAAAAGAAA CTATCAA AAG TAGATAG AAAGATATCTATACA PMT9312_0694 653744 - 652995 - | NAD-dependent DNA ligase PMT9312_0695 654240 - 653983 - | Notch domain-containing protein PMT9312_0696 654549 - 654310 - | hypothetical protein PMT9312_0697 654739 - 655029 + | zinc finger, C2H2 type-like PMT9312_0698 655032 - 655289 + | hypothetical protein TERM 512 655699 - 655732 + T 89 -9.7 -4.38116 | opp_overlap 655705, overlap 655701 AAACTAATGCTATGT CAGGAATGCATCTCT TGTT AGAGATTCATTCCTC TTTAATTTTTCTAAA TERM 513 655701 - 655730 + T 95 -12.3 -3.7798 | opp_overlap 655705, overlap 655699 ACTAATGCTATGTCA GGAATGCATCTCT TGTT AGAGATTCATTCC TCTTTAATTTTTCTA PMT9312_0699 656207 - 656010 - | hypothetical protein PMT9312_0700 656554 - 656300 - | high light inducible protein-like PMT9312_0701 657247 - 657074 - | hypothetical protein PMT9312_0702 657558 - 657346 - | hypothetical protein TERM 514 657503 - 657518 + g 72 -4.8 -4.79223 | TTAACTTGAAAATGC CTATTA CCAT TAATAG TTTTTGGTGCTGTCC PMT9312_0703 657952 - 657743 - | DDT domain-containing protein-like TERM 515 657834 - 657853 + g 76 -6.4 -4.6902 | opp_overlap 657829 657834, overlap 657838 AGATCATAAATAAAA GAATCTGG ACAT CCAGTTTC TTTTTGAAGTTCTGA TERM 516 657853 - 657834 - G 82 -6.4 -5.03227 | opp_overlap 657834 657838, overlap 657829 AGATCATAAATAAAA GAATCTGG ACAT CCAGTTTC TTTTTGAAGTTCTGA TERM 517 657838 - 657849 + g 78 -5.8 -4.88293 | opp_overlap 657834 657829, overlap 657834 CATAAATAAAAGAAT CTGG ACAT CCAG TTTCTTTTTGAAGTT PMT9312_0704 658133 - 657963 - | hypothetical protein PMT9312_0705 658581 - 659246 + | short-chain dehydrogenase/reductase TERM 518 659550 - 659524 - T 70 -5.1 -4.56736 | opp_overlap 659525, overlap 659525 ACTTAATAATCAAAA GCTCTGCCTCT CAAGT AGATGCAGAGT TTTTTTTATGAATTT TERM 519 659549 - 659525 - T 75 -8.6 -3.32957 | opp_overlap 659525, overlap 659524 CTTAATAATCAAAAG CTCTGCCTCT CAAGT AGATGCAGAG TTTTTTTTATGAATT TERM 520 659525 - 659549 + T 100 -8.6 -5.97575 | opp_overlap 659525 659524 CTTAATAATCAAAAG CTCTGCCTCT CAAGT AGATGCAGAG TTTTTTTTATGAATT PMT9312_0706 660036 - 659782 - | hypothetical protein PMT9312_0707 660263 - 660036 - | D12 class N6 adenine-specific DNA met-like PMT9312_0708 660508 - 660353 - | hypothetical protein PMT9312_0709 660778 - 660527 - | DnaJ domain-containing protein TERM 521 661887 - 661876 - g 73 -4.4 -5.08824 | opp_overlap 661876 TGTTCAGTTAAAAAA GAGT CTAA ACTC TTTAATTATTGTGTT PMT9312_0710 661732 - 661968 + | hypothetical protein PMT9312_0711 661991 - 662233 + | hypothetical protein PMT9312_0712 662853 - 662542 - | lysM domain-containing protein TERM 522 662732 - 662721 - G 73 -4.4 -4.98255 | opp_overlap 662731 TTTGAACCATAAAAA TCCA AGAA TGGA CCTCATAGTTTTCAG TERM 523 663164 - 663150 - g 75 -2.8 -5.67529 | AATGAAAAATAAAAA GGATAA TCG TGATCC AATTGATAATTTAGA TERM 524 663297 - 663287 - g 74 -6.8 -4.24602 | ATAGACTTAAAAGAA CTCC ATT GGAG ATAGTAAATAGGTTA PMT9312_0713 663136 - 663519 + | hypothetical protein PMT9312_0714 663874 - 664227 + | hypothetical protein PMT9312_0715 664620 - 665675 + | VIC family potassium channel protein PMT9312_0716 665730 - 666083 + | cytochrome c PMT9312_0717 666279 - 667007 + | two component transcriptional regulator PMT9312_0718 667004 - 668164 + | histidine kinase PMT9312_0719 668498 - 668172 - | lipoprotein-like TERM 525 668570 - 668525 - R 71 -7 -3.8917 | opp_overlap 668525 668537 668568, overlap 668537 TTTTAATTATAAGAA CTGCAAAAAAAAGCCACCTT ATATAA AAGGTGACTTTTATTAGTAG TTTTAACTAGATTTT TERM 526 668525 - 668570 + r 74 -7 -4.22948 | opp_overlap 668525 668537, overlap 668537 668568 TTTTAATTATAAGAA CTGCAAAAAAAAGCCACCTT ATATAA AAGGTGACTTTTATTAGTAG TTTTAACTAGATTTT TERM 527 668558 - 668537 - R 100 -6.6 -5.81032 | opp_overlap 668537 668525, overlap 668525 GAACTGCAAAAAAAA GCCACCTT ATATAA AAGGTGAC TTTTATTAGTAGTTT PMT9312_0720 670859 - 668577 - | putative secreted protein TERM 528 670996 - 670956 - R 100 -14.2 -2.65521 | opp_overlap 670961 670966, overlap 670966 TTTATAGGAAGTAAG CAAAAAAAAAGGACCTCC TAAAT GGAGGTCCTTTTGATTTG GGTATTCTGATTAGA TERM 529 670961 - 670991 + r 95 -12.7 -2.86961 | opp_overlap 670956 670966, overlap 670966 AGGAAGTAAGCAAAA AAAAAGGACCTCC TAAAT GGAGGTCCTTTTG ATTTGGGTATTCTGA TERM 530 670986 - 670966 - R 100 -12.6 -6.23209 | opp_overlap 670961 670966, overlap 670956 GTAAGCAAAAAAAAA GGACCTCC TAAAT GGAGGTCC TTTTGATTTGGGTAT TERM 531 670966 - 670986 + r 100 -12.6 -4.57516 | opp_overlap 670966 670956, overlap 670961 GTAAGCAAAAAAAAA GGACCTCC TAAAT GGAGGTCC TTTTGATTTGGGTAT PMT9312_0721 672329 - 671007 - | porin precursor-like TERM 532 672362 - 672349 - H 74 -5.3 -4.74706 | opp_overlap 672349 CTCAACACGTAAAAA TGGAT TAAT ATCCA ATTGTTATTTCAACG PMT9312_0722 672671 - 673666 + | periplasmic phosphate binding protein TERM 533 673688 - 673706 + T 88 -5.3 -5.60993 | opp_overlap 673688 AGACAATATTTAAAA GGAGGAA TTTAT TTCTTCC TTTTTTTATGCAAAC PMT9312_0723 674938 - 673712 - | chromate transporter TERM 534 674265 - 674249 - G 95 -4.5 -6.22691 | opp_overlap 674251, overlap 674251 CAAGAAGAAAAAAAA CAGATTA AGA TAATCTA TTAAAAACTTTGAGT PMT9312_0724 676228 - 674969 - | major facilitator superfamily multidrug-efflux transporter PMT9312_0725 677295 - 676240 - | glyceraldehyde-3-phosphate dehydrogenase TERM 535 676352 - 676368 + g 70 -8.1 -3.11291 | opp_overlap 676344 676350 676347 676364 GAATTAACAACCATC GTTGATA AAC TATCAAC TATTGAACTTCTGGA TERM 536 677315 - 677288 - G 74 -7.2 -4.03234 | opp_overlap 677295 677301 677303, overlap 677291 677295 TTTTTTCTATATAAA TCATACATCAAA ATAT TTTGATGTATCA AGATGTTTTGACTAA TERM 537 677312 - 677291 - G 74 -8.9 -3.06418 | opp_overlap 677295 677301 677303, overlap 677288 677295 TTTCTATATAAATCA TACATCAAA ATAT TTTGATGTA TCAAGATGTTTTGAC PMT9312_0726 677430 - 677702 + | ArsR family transcriptional regulator PMT9312_0727 678105 - 679052 + | phosphate ABC transporter permease PMT9312_0728 679059 - 679952 + | phosphate ABC transporter permease PMT9312_0729 679953 - 680762 + | phosphate ABC transporter ATP-binding protein PMT9312_0730 681766 - 681464 - | hypothetical protein TERM 538 681588 - 681602 + g 80 -5.6 -5.1764 | opp_overlap 681588 TCGTCTTGTTTAAGA GCCATG TAA CTTGGC TTTTTATCTTCTATA PMT9312_0731 682627 - 681977 - | serine/threonine specific protein phosphatase TERM 539 682218 - 682236 + g 76 -5.4 -4.95155 | TCAACTGGTTCATGG CTAAAAGT AAT ATTTTTAG TTTTTCTAATATCAA TERM 540 682324 - 682342 + g 95 -6 -5.75945 | CATTAGTTTGTAGTA GTTCAGGA AGA TCCTCAAC TTTTTTTTGAAGAGT PMT9312_0732 685114 - 682628 - | DEAD/DEAH box helicase-like PMT9312_0733 686751 - 685111 - | ATP-dependent DNA ligase TERM 541 686078 - 686096 + g 72 -9 -2.75992 | TCATTTATTGAATGT TTGAAGAT TTT ATCTTCAA TAGTATTCGCTAGAA PMT9312_0734 687740 - 686754 - | hypothetical protein PMT9312_0735 688189 - 687776 - | ComC family protein-like PMT9312_0736 688561 - 688274 - | major surface glycoprotein-like PMT9312_0737 689979 - 688660 - | hypothetical protein TERM 542 689140 - 689124 - G 72 -7.3 -3.80893 | overlap 689125 ACTCTAGAAGCGAAA CGAGTAC AGC GTACTCA CAAGATTTTTGTCTT TERM 543 689139 - 689125 - G 71 -8.6 -2.88054 | overlap 689124 CTCTAGAAGCGAAAC GAGTAC AGC GTACTC ACAAGATTTTTGTCT TERM 544 689176 - 689195 + g 70 -4.4 -4.79174 | TTTATCTAATTCTTT GAAAAAAT CTTC GTTTTTTC TTTTATTAGTTCCAT TERM 545 689652 - 689675 + g 74 -4 -5.13527 | overlap 689643 CATCCTTTAAATTGT TTAATTCATT ATTG AGTGAATTGA TTTTATTTGTTGCTT TERM 546 689854 - 689873 + g 71 -6.6 -4.09292 | overlap 689844 ATTATCTTCTTCAGC TAAAAGAA GTCT TTCTTTTA TTTGCTTGTTAAATT PMT9312_0738 690480 - 690112 - | CopG family protein TERM 547 690605 - 690587 - H 79 -8.2 -3.83756 | opp_overlap 690587 690590, overlap 690590 AAAGTATAATTTAAA CAACCTTC AAA GAAGGTTA TTTCTTAATTAATAA TERM 548 690602 - 690590 - H 75 -7.7 -4.03167 | opp_overlap 690590 690587, overlap 690587 GTATAATTTAAACAA CCTTC AAA GAAGG TTATTTCTTAATTAA TERM 549 690590 - 690602 + H 77 -7.7 -4.27694 | opp_overlap 690587 690590, overlap 690587 GTATAATTTAAACAA CCTTC AAA GAAGG TTATTTCTTAATTAA PMT9312_0739 690701 - 690904 + | hypothetical protein PMT9312_0740 691265 - 691462 + | hypothetical protein PMT9312_0741 691680 - 691486 - | hypothetical protein PMT9312_0742 691735 - 692004 + | hypothetical protein PMT9312_0743 692667 - 692317 - | alpha-2-macroglobulin family protein-like PMT9312_0744 692886 - 692710 - | hypothetical protein TERM 550 692988 - 692961 - R 74 -7.3 -3.92996 | opp_overlap 692961 TTTCATAGAGAATAA TTGAAAATTTA ATTTTA TAAATTTTCAA TTTCATAGATTTCTT TERM 551 692961 - 692988 + r 74 -7.3 -3.83771 | opp_overlap 692961 TTTCATAGAGAATAA TTGAAAATTTA ATTTTA TAAATTTTCAA TTTCATAGATTTCTT PMT9312_0745 693406 - 692975 - | hypothetical protein PMT9312_0746 693536 - 693805 + | hypothetical protein TERM 552 693781 - 693800 + T 79 -8 -3.98113 | opp_overlap 693780 AAATGCTTTTAATAT TTTCGAAT CAGA ATTCGAAA TTTAATTACTAATTA TERM 553 694069 - 694084 + T 90 -4.8 -5.96521 | opp_overlap 694067 694069 TTAAATTACTCAATA TTATAG GTAT CTATAA TTTTTTTTAATTCAT PMT9312_0747 694343 - 694059 - | hypothetical protein TERM 554 694345 - 694367 + H 74 -5 -4.99043 | CTTCCCAATTTCAAT TTTTCTATAT TCT ATTTAGAAAA TTTTGTTTCTGAGAA PMT9312_0748 694454 - 694555 + | cytochrome b6-f complex subunit PetN PMT9312_0749 695352 - 694702 - | Thf1-like protein PMT9312_0750 695388 - 695975 + | ATP-dependent Clp protease proteolytic subunit PMT9312_0751 697885 - 695972 - | FtsH peptidase PMT9312_0752 697993 - 698202 + | hypothetical protein PMT9312_0753 699421 - 698204 - | insulinase family protein TERM 555 698828 - 698838 + g 95 -4 -6.26417 | TAAATGTACTGATTT TTCT TTT AGAA TTTTTTTTTCTAATG PMT9312_0754 700680 - 699415 - | Zn-dependent peptidase-like TERM 556 701135 - 701172 + G 72 -3.5 -5.252 | gap 1, overlap 701136 701137 AGTTGATAAAAGTTC CTTCACCTCATTGAGAGA GAT TC-CTAAATGGGGTGAGA TTTTTTCTGAAAATG PMT9312_0755 700722 - 701447 + | phycocyanobilin:ferredoxin oxidoreductase PMT9312_0756 701447 - 702361 + | ABC transporter component-like PMT9312_0757 702361 - 703533 + | ABC transporter transmembrane protein PMT9312_0758 703540 - 704268 + | ABC transporter ATP-binding protein PMT9312_0759 704287 - 704436 + | hypothetical protein PMT9312_0760 704500 - 705411 + | glycosyl transferase family protein rpsB 705539 - 706240 + | 30S ribosomal protein S2 TERM 557 706252 - 706237 - f 78 -3.4 -5.71638 | overlap 706238 TAATAACGAAAAAAA TTAAAT TCTA ATTTAA AACTTACTAATTACT tsf 706285 - 706941 + | elongation factor Ts TERM 558 707032 - 707019 - g 95 -5.3 -6.06529 | opp_overlap 707019 CAGATAGAAAAAAAA GCAAA TTAG TTTGC TATATCTACAGGGAA PMT9312_0763 706946 - 708022 + | adenylate cyclase-like TERM 559 708420 - 708394 - g 74 -3 -5.42259 | overlap 708376 TTATTTTGAAAAAAA CCGATTCAAG TTTGTCT CTTGATTCAG ATATTTCATTAATAA TERM 560 709182 - 709195 + G 74 -3.9 -5.13521 | opp_overlap 709182 TTGCCTCAAAAGAAA TCTTT ACTA AAAGA TTTTTTAAATAATTT PMT9312_0764 708045 - 710501 + | ATP-dependent DNA helicase recG PMT9312_0765 710559 - 711242 + | D-ala-D-ala dipeptidase PMT9312_0766 713033 - 711246 - | sulfite reductase subunit beta TERM 561 711380 - 711398 + g 91 -10.4 -4.09243 | opp_overlap 711378 CTAAATCATTTAATT CCATTCTT TGT AAGAATGG TTTTGCCAGCCTCTG TERM 562 711641 - 711658 + g 93 -9.9 -4.40184 | AAAGTGGTAAAGCTG GACATGC TAAC GCATGTC TTTGTATTTCATTAA TERM 563 712018 - 712029 + g 77 -3 -5.52096 | CTGTGAATAAGGTAT TTCA TTCT TGAA TTTTTTCTTGACTTT TERM 564 714438 - 714457 + G 74 -7.2 -4.05677 | TTTAGTGAGGATGTT TGTTTAGC TGTA GCTGAACA TTATTTACCTTCTTT PMT9312_0767 713121 - 715283 + | glycyl-tRNA synthetase, beta subunit PMT9312_0768 716604 - 715264 - | aromatic-ring hydroxylase (flavoprotein monooxygenase) PMT9312_0769 716719 - 717432 + | putative carboxypeptidase PMT9312_0770 717561 - 719357 + | tyrosine binding protein TERM 565 719620 - 719610 - g 71 -3.2 -5.20333 | TAGGTAGAATAAAAA CTAG AAC CCAG ATTAATTTAGGTATT PMT9312_0771 719369 - 719737 + | hypothetical protein PMT9312_0772 719816 - 720550 + | ATPase PMT9312_0773 720665 - 721594 + | putative heme transporter PMT9312_0774 722375 - 721617 - | ribulose-5-phosphate 3-epimerase TERM 566 722522 - 722494 - H 73 -9.1 -2.79289 | opp_overlap 722490, overlap 722493 TACTAGCGTAATAAT TCTCATAAAAAAT GAC ATTTTTTGTGAGA TCATACTCTAAACCT TERM 567 722953 - 722931 - g 70 -6.3 -4.29106 | overlap 722934 TTTTACATGAACAAA TTAGCAGCT CCTCC AGCTGCGAA AGGGAAAGTAGATAT TERM 568 722950 - 722934 - g 70 -8 -3.14013 | overlap 722931 TACATGAACAAATTA GCAGCT CCTCC AGCTGC GAAAGGGAAAGTAGA glpX 722505 - 723566 + | fructose 1,6-bisphosphatase II hemA 723585 - 724895 + | glutamyl-tRNA reductase TERM 569 726303 - 726291 - g 76 -6.3 -4.68593 | TGTAGTAGTTAAAAA TGCAA CTA TTGCA AACGGAACTGTTATT glgC 725026 - 726321 + | glucose-1-phosphate adenylyltransferase TERM 570 726654 - 726644 - g 74 -6.8 -4.17023 | TTAATGATGGTAAAA GCTG GAC CAGC AACAGATGCGGTTAT PMT9312_0778 726416 - 727834 + | 6-phosphogluconate dehydrogenase PMT9312_0779 727822 - 728559 + | 6-phosphogluconolactonase PMT9312_0780 728590 - 729138 + | hypothetical protein PMT9312_0781 729128 - 729514 + | putative coat protein PMT9312_0782 731209 - 729536 - | dihydroxy-acid dehydratase PMT9312_0783 731523 - 731233 - | hypothetical protein PMT9312_0784 732170 - 731553 - | putative uracil phosphoribosyltransferase TERM 571 731757 - 731773 + g 71 -6.7 -4.07455 | ATCAACACCTAATTC CTTTAAT TTA ATTAAAG TTTCTAATGTTGCTG PMT9312_0785 732234 - 732746 + | hypothetical protein PMT9312_0786 732756 - 733820 + | putative cobalamin synthesis protein PMT9312_0787 734129 - 734383 + | phosphoribosylformylglycinamidine synthetase PurS PMT9312_0788 734385 - 735050 + | phosphoribosylformylglycinamidine synthase I TERM 572 735076 - 735057 - T 100 -7.8 -6.23545 | opp_overlap 735057 735059 TTGAAATAAAAAAAA GACCCCCA ATTT TGGAGGCC TTTTTTTTTAATTTG TERM 573 735057 - 735076 + T 93 -3.4 -6.28631 | opp_overlap 735057, overlap 735059 TTGAAATAAAAAAAA GACCCCCA ATTT TGGAGGCC TTTTTTTTTAATTTG PMT9312_0789 736173 - 735100 - | fructose-1,6-bisphosphate aldolase PMT9312_0790 737363 - 736266 - | putative oxidoreductase TERM 574 736459 - 736470 + g 73 -4.4 -5.00136 | opp_overlap 736459 AAATTAAAAATTGAA TCTG CAGT CAGA TTTTGTATTTTATTT PMT9312_0791 737758 - 737366 - | hypothetical protein PMT9312_0792 738642 - 737761 - | acetyl-CoA carboxylase subunit beta PMT9312_0793 739686 - 738787 - | phosphoribulokinase PMT9312_0794 740850 - 739777 - | 3-isopropylmalate dehydrogenase TERM 575 740310 - 740327 + g 72 -7.1 -3.88178 | TTTTATTTCTTTGGT TAGCAAT TTTT ATTGCTA TTTCAGTTATTCTCT PMT9312_0795 741913 - 740879 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase PMT9312_0796 743016 - 741934 - | gamma-glutamyl kinase PMT9312_0797 743507 - 743013 - | HAD family phosphatase TERM 576 743333 - 743348 + g 76 -3.3 -5.4477 | AGGAGAAAAGTTTTC TGGAT TCACTT ATCCA TTTTTTTACAGCTTT PMT9312_0798 744049 - 743513 - | hypothetical protein PMT9312_0799 744538 - 744077 - | Holliday junction resolvase YqgF PMT9312_0800 745590 - 744535 - | hypothetical protein PMT9312_0801 746756 - 745587 - | hypothetical protein PMT9312_0802 747322 - 746771 - | hypothetical protein PMT9312_0803 748953 - 747337 - | hypothetical protein PMT9312_0804 749800 - 749033 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 577 750288 - 750273 - g 76 -6.2 -4.61199 | AGTGGAGACAGAAAA TTGGTT GATA AACCAA AAAATTCCTTTTACA PMT9312_0805 749893 - 750813 + | putative mRNA binding protein PMT9312_0806 751326 - 750787 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 578 751880 - 751863 - g 72 -7.1 -3.9243 | CAATGTCTCAAATAA TGATTTG ATTA CAAATCA ATCACGTGTGAAAGC TERM 579 752027 - 752006 - g 73 -4.5 -5.03747 | opp_overlap 752006, overlap 752009 AAAGCTTTCAAAAAA TAATGGTTA AAAG TAACCATAA TACTTTCCCTCAAAT TERM 580 752024 - 752009 - g 76 -6.2 -4.61482 | opp_overlap 752006, overlap 752006 GCTTTCAAAAAATAA TGGTTA AAAG TAACCA TAATACTTTCCCTCA PMT9312_0807 751513 - 752124 + | hypothetical protein PMT9312_0808 752322 - 752134 - | hypothetical protein TERM 581 752194 - 752206 + g 70 -6.3 -4.22338 | opp_overlap 752194 TAACTGCTTTATTAA TCTTG AAA CAAGA TTTTGAAATTCTGGT PMT9312_0809 753008 - 752349 - | putative NADH-flavin reductase PMT9312_0810 753697 - 753044 - | putative endonuclease TERM 582 753928 - 753944 + G 83 -8 -4.20696 | ACTTGGTCCTTCTGG GTGTGG AAAGA CCACAC TTTTGAGATTGATCG TERM 583 753973 - 753989 + G 79 -7.3 -4.47183 | opp_overlap 753973 CGCAGGGTTCGAATA TCCTTCT AAA GGAAGGA TTTCTTTAAATGATA PMT9312_0811 753794 - 754852 + | ATPase PMT9312_0812 755097 - 755651 + | ferritin PMT9312_0813 755927 - 755637 - | hypothetical protein PMT9312_0814 756519 - 755932 - | CRP/FNR family transcriptional regulator TERM 584 756812 - 756791 - g 77 -3.1 -5.64274 | TCATTTAGAAAAAAA TCTTATTCA TTTT TTAATAAGA AAAAATTAATTATTC PMT9312_0815 756674 - 756865 + | Zn-ribbon protein PMT9312_0816 757646 - 756858 - | ATPase PMT9312_0817 759073 - 757751 - | Rieske iron-sulfur protein 2Fe-2S subunit PMT9312_0818 759425 - 759231 - | hypothetical protein PMT9312_0819 759788 - 760129 + | S1 RNA-binding domain-containing protein TERM 585 760253 - 760241 - T 73 -3.5 -5.38958 | ATGCATAAACAAAAA TTATT GGA AATAA TAAAATCACTGATCC PMT9312_0820 760975 - 760679 - | hypothetical protein TERM 586 761471 - 761489 + G 79 -6.8 -4.66163 | TGAAGCTTATACTGG GTTTAAAG ATT CTTTAGAC TTTTTAACTGAAGAT PMT9312_0821 761286 - 761684 + | BdrC3-like PMT9312_0822 761817 - 762131 + | hypothetical protein TERM 587 762144 - 762129 - f 72 -3.4 -5.32565 | opp_overlap 762129, overlap 762121 762132 GAACTAATTAAAAAA TAATTT TCTA AAATTA ATTATTTTTATTTTA PMT9312_0823 762602 - 762802 + | hypothetical protein PMT9312_0824 763066 - 763245 + | hypothetical protein PMT9312_0825 763989 - 763279 - | ATPase PMT9312_0826 764741 - 763992 - | ATPase TERM 588 764264 - 764279 + g 82 -7.6 -4.41633 | opp_overlap 764264 764262, overlap 764262 TCTGTCCAACTAACA TGGCTA TTTC TAGCCA TTGTTTTTGGCCATG PMT9312_0827 765864 - 764734 - | putative membrane protein of urea ABC transport system TERM 589 765489 - 765473 - G 79 -8 -3.98775 | AGAAATCCAATTAAA CCAGCA ACCAA TGCTGG AATGATCCAAATAGC PMT9312_0828 767018 - 765864 - | putative urea ABC transporter TERM 590 767073 - 767048 - R 100 -13.5 -4.52857 | opp_overlap 767048 767053, overlap 767053 ATTGTTTATATAAAA TAAAAGGAGGT GTTA ACCTCCTTTTA TTTTGAAGTATAGGT TERM 591 767048 - 767073 + r 100 -13.5 -4.1721 | opp_overlap 767048 767053, overlap 767053 ATTGTTTATATAAAA TAAAAGGAGGT GTTA ACCTCCTTTTA TTTTGAAGTATAGGT TERM 592 767053 - 767068 + r 100 -9 -5.09259 | opp_overlap 767053 767048, overlap 767048 TTATATAAAATAAAA GGAGGT GTTA ACCTCC TTTTATTTTGAAGTA TERM 593 767068 - 767053 - R 100 -9 -5.23292 | opp_overlap 767048 767053, overlap 767048 TTATATAAAATAAAA GGAGGT GTTA ACCTCC TTTTATTTTGAAGTA PMT9312_0829 768376 - 767099 - | putative urea ABC transporter, substrate binding protein TERM 594 767866 - 767847 - G 79 -7.2 -4.36596 | gap 1, overlap 767840 CCTACAAGGAAGAAA TCTCCA-CC GGC GGCTGGAGA ACGCTTATACATGAA PMT9312_0830 769116 - 768505 - | urease accessory protein UreG PMT9312_0831 769806 - 769120 - | urease accessory protein UreF TERM 595 769821 - 769834 + r 83 -3.9 -5.85178 | TGACTATGTGCGCCT TTTTC AGGA GAAAA TTTTTTTTGGGTATT ureE 770248 - 769799 - | urease accessory protein UreE TERM 596 770491 - 770511 + G 81 -9.9 -3.01924 | opp_overlap 770491 ATTGGTAGGAGGAGA TTTACTTCA GTT TGAAGTAAA TCTTGAAAAAAACTC TERM 597 770511 - 770491 - g 79 -9.9 -2.82635 | opp_overlap 770491 ATTGGTAGGAGGAGA TTTACTTCA GTT TGAAGTAAA TCTTGAAAAAAACTC TERM 598 770904 - 770924 + G 79 -6.8 -4.7078 | opp_overlap 770903 770906, overlap 770906 GTTATGAGGCAAAGT CAGGCATG GACTA CATGCCCG TTTTTGGATCCTTAA PMT9312_0833 770297 - 771199 + | urease accessory protein UreD ureA 771250 - 771552 + | urease subunit gamma ureB 771555 - 771875 + | urease subunit beta ureC 771880 - 773589 + | urease subunit alpha PMT9312_0837 774812 - 773586 - | hypothetical protein TERM 599 774197 - 774186 - G 74 -5.8 -4.65838 | TAGATATTGTAAAAA GGGA CCCT TCCC AACTAACTGCTCAAG PMT9312_0838 774863 - 776623 + | alpha amylase domain-containing protein PMT9312_0839 776625 - 777422 + | mannosyl-3-phosphoglycerate phosphatase TERM 600 777568 - 777537 - g 79 -2.5 -5.71638 | GAATAATCAAAAAAA TATTCTTTCAATA GATCAA TATTGGAAAAATA AAGTTAATGATGATT TERM 601 777658 - 777636 - g 74 -6.5 -4.4595 | opp_overlap 777639 TTATAAAATTCAAAA TAATTTTTC TGATC GAAAAATTA TTGGGATCTCAGCTC PMT9312_0840 777427 - 778371 + | putative kinase PMT9312_0841 778462 - 778689 + | hypothetical protein PMT9312_0842 778968 - 779102 + | hypothetical protein TERM 602 779461 - 779429 - g 75 -5.1 -4.98531 | opp_overlap 779437, overlap 779437 TTTTTAAATTAAAAA TTCAATCATCAAAAA AAA TTTTTGATTATTTAA TACATGAAAGGTTAT TERM 603 779437 - 779453 + G 71 -6.7 -4.015 | opp_overlap 779429 779437 TTAAAAATTCAATCA TCAAAAA AAA TTTTTGA TTATTTAATACATGA PMT9312_0843 779221 - 780027 + | undecaprenyl-diphosphatase PMT9312_0844 781063 - 780335 - | peptide methionine sulfoxide reductase PMT9312_0845 782845 - 781100 - | multidrug ABC transporter PMT9312_0846 782910 - 783224 + | hypothetical protein PMT9312_0847 783257 - 784306 + | putative anthranilate synthase component II PMT9312_0848 784306 - 785445 + | carbamoyl phosphate synthase small subunit PMT9312_1812 785747 - 785872 + | hypothetical protein PMT9312_0850 785869 - 786267 + | hypothetical protein PMT9312_0851 786272 - 787282 + | RNA methyltransferase TrmH, group 3 PMT9312_0852 787430 - 787645 + | hypothetical protein PMT9312_0853 787678 - 789120 + | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A dnaE 789211 - 792708 + | DNA polymerase III subunit alpha PMT9312_0855 793160 - 792714 - | hypothetical protein TERM 604 792739 - 792755 + g 74 -6.5 -4.5394 | TCAAAGTTTTGAGTA GCAGGCT TGA AGGCTGC TTTTGCTCTTTGTAT rpsO 793439 - 793170 - | 30S ribosomal protein S15 PMT9312_0857 794149 - 793472 - | Holliday junction DNA helicase subunit RuvA PMT9312_0858 794527 - 794150 - | cAMP phosphodiesterase class-II-like PMT9312_0859 795421 - 794531 - | integral membrane protein, DUF6 dnaG 795516 - 797549 + | DNA primase PMT9312_0861 798033 - 797566 - | serine hydroxymethyltransferase-like PMT9312_0862 799330 - 798044 - | DNA-directed DNA polymerase PMT9312_0863 799743 - 799327 - | SOS mutagenesis protein UmuD PMT9312_0864 800266 - 799850 - | hypothetical protein PMT9312_0865 800618 - 800286 - | hypothetical protein ksgA 800675 - 801505 + | dimethyladenosine transferase PMT9312_0867 801510 - 802445 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase PMT9312_0868 802471 - 802773 + | hypothetical protein PMT9312_0869 802953 - 803936 + | pyruvate dehydrogenase E1 beta subunit secD 803940 - 805409 + | preprotein translocase subunit SecD secF 805432 - 806346 + | preprotein translocase subunit SecF TERM 605 806334 - 806348 + F 78 -7.2 -4.50661 | GGCTCCATCTTTGTT GCTTAA AGA TTAAGC TTTTCCTTATAACTT PMT9312_0872 806365 - 806547 + | hypothetical protein PMT9312_0873 807594 - 806551 - | hypothetical protein PMT9312_0874 807961 - 807608 - | photosystem II reaction center protein Psb28 PMT9312_0875 809064 - 808021 - | tRNA 2-selenouridine synthase PMT9312_0876 809099 - 809818 + | hypothetical protein PMT9312_0877 809868 - 810302 + | anti-sigma regulatory factor (Ser/Thr protein kinase) PMT9312_0878 810544 - 810281 - | hypothetical protein PMT9312_0879 811612 - 810557 - | SAM (and some other nucleotide) binding motif:Generic methyl-transferase TERM 606 810876 - 810895 + g 72 -5 -4.79174 | opp_overlap 810876 CTATTATTTTCAAAT GGTAATTC TTCA GCATTACC TTTTATTAATTCAAT TERM 607 811651 - 811687 + r 73 -8.4 -3.18115 | gap 1, opp_overlap 811651, overlap 811650 811647 CCAACAAAAAAAAAA TCAATTTGAGA-ATATT TTGT GATATTTCTCAAATTGA CTTATTTTATAGAAA TERM 608 811687 - 811651 - R 100 -7.7 -6.59152 | gap 1, opp_overlap 811651 811650 811647 CCAACAAAAAAAAAA TCAATTTGAGA-ATAT TTTGTG ATATTTCTCAAATTGA CTTATTTTATAGAAA PMT9312_0880 813135 - 811714 - | glutamine synthetase, glutamate--ammonia ligase TERM 609 812302 - 812281 - G 70 -7.3 -3.73775 | opp_overlap 812286, overlap 812284 GGCACTTTCACCAAA GAATAGTGG CTGT CCACTCTTC CATAAACTTTGGTGA TERM 610 814342 - 814360 + G 71 -6.8 -4.10453 | CCAGCAGTTGATGGA GATGGTTT TAG AAATCATC TTTTAAGAAACTTTG PMT9312_0881 813349 - 814533 + | serine:pyruvate/alanine:glyoxylate aminotransferase PMT9312_0882 815023 - 814508 - | tRNA-adenosine deaminase PMT9312_0883 815067 - 816452 + | pyridoxal-dependent decarboxylase family protein PMT9312_0884 818084 - 816585 - | small GTP-binding protein domain-containing protein TERM 611 816774 - 816784 + g 70 -4 -5.06414 | ATATTCAATCAAACT TAGT CCT ACTA TTTTTATTAACCAGC PMT9312_0885 818544 - 818086 - | signal peptidase II PMT9312_0886 819113 - 818544 - | biotin synthase PMT9312_0887 820325 - 819129 - | putative ABC transporter TERM 612 819990 - 819972 - G 76 -7.4 -4.20918 | opp_overlap 819972 819972 TCTAACTTCAAGAAA TTCAGGAG TAA CTCCTGCA ATTGATATATTTAGA PMT9312_0888 822147 - 820354 - | pyruvate kinase TERM 613 822102 - 822113 + g 74 -3 -5.40014 | GAGTTGCAGGTCCAA TAGT TGCT ACTA TTTTTGTTCTTCTTT PMT9312_0889 822209 - 822538 + | hypothetical protein PMT9312_0890 822819 - 822541 - | hypothetical protein PMT9312_0891 823319 - 822855 - | condensin subunit ScpB PMT9312_0892 824978 - 823431 - | threonine dehydratase TERM 614 825789 - 825809 + G 76 -6.1 -4.57569 | GTGTGAGACGTTTAG CTGTTCCTA AGG TTGGAGCAG TTTTTGAAGAACTCG PMT9312_0893 825089 - 826978 + | 1-deoxy-D-xylulose-5-phosphate synthase PMT9312_0894 827258 - 826998 - | photosystem I PsaK protein (subunit X) PMT9312_0895 827660 - 827325 - | hypothetical protein PMT9312_0896 827955 - 827653 - | hypothetical protein PMT9312_0897 828493 - 827960 - | alkyl hydroperoxide reductase/thiol specific antioxidant/ Mal allergen rpmB 828735 - 828499 - | 50S ribosomal protein L28 PMT9312_0899 830679 - 828775 - | heat shock protein 90 TERM 615 830037 - 830050 + g 74 -3.1 -5.3321 | ATTCACTAGGTTGTT TTCTC CAAG GAGGA TTTTTCTTATTAATT hisZ 831950 - 830799 - | ATP phosphoribosyltransferase regulatory subunit PMT9312_0901 832822 - 831974 - | myo-inositol-1(or 4)-monophosphatase-like TERM 616 832356 - 832317 - G 77 -4.4 -5.18726 | gap 1, overlap 832320 CTGTCATAAGAAAAA CCAGTCACTAGTAAACTTT CAG AAAGGTTACGAG-GACTCG ATACTTTAATTTTAG PMT9312_0902 833202 - 832828 - | ferredoxin, petF-like protein TERM 617 833357 - 833375 + H 100 -5.4 -6.11644 | TATATTAGTTGATTT TTGTTGAT TAC ATCAATAA TTTTTTTTTGAATAG PMT9312_0903 833552 - 835549 + | molecular chaperone DnaK, heat shock protein hsp70 PMT9312_0904 835500 - 836459 + | DnaJ-class molecular chaperone PMT9312_0905 836493 - 836873 + | hypothetical protein PMT9312_0906 836910 - 837347 + | peptidylprolyl isomerase PMT9312_0907 839077 - 837353 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein argC 839166 - 840221 + | N-acetyl-gamma-glutamyl-phosphate reductase PMT9312_0909 840939 - 840205 - | phosphoribosylglycinamide formyltransferase TERM 618 841774 - 841756 - g 70 -8.2 -3.14211 | opp_overlap 841758, overlap 841759 ATTGGGTTGGAGGAA GAACTAGT ATT ACTAGCTC TGTAGGATTACTTCC pgi 841041 - 842624 + | glucose-6-phosphate isomerase leuS 845191 - 842621 - | leucyl-tRNA synthetase TERM 619 843083 - 843093 + g 86 -4 -5.85425 | AGCAATGTTCATTGA CTTT ATT AAAG TTTTTTCTTTATTTG TERM 620 843549 - 843527 - G 82 -7.8 -4.65895 | opp_overlap 843527 843543 843544, overlap 843544 TGCTTTAGTGAAAAA TCTTGCATAT AAC AAATGCAAGA TTGCGTGCTCTACTC TERM 621 844854 - 844875 + g 73 -8.1 -3.47029 | TGAGAAATATTTTTT TTAGTCCAG ACAC TTGGACTAA TTCCTCTTTCAATCG TERM 622 845611 - 845601 - g 72 -2.6 -5.3321 | AATGAATAATAAAAA TATA GAA TATA AAATTGAGACTAAAG PMT9312_0912 845299 - 846159 + | diaminopimelate epimerase TERM 623 846955 - 846938 - g 88 -7.1 -5.00388 | opp_overlap 846938 TAAAGGAAAAATAAA GTTATGT GATT ACATAAC TGAATTTCCTTCTAA PMT9312_0913 846159 - 847331 + | class-V aminotransferase family cysteine desulfurase-like protein PMT9312_0914 847331 - 847957 + | hypothetical protein TERM 624 848590 - 848576 - g 70 -4.4 -4.75404 | opp_overlap 848576 AAATTTTATTAAAAA TTATTT AAA AAATAA ATTTCCAAATTCAAA TERM 625 848616 - 848638 + G 74 -4.2 -5.27335 | opp_overlap 848601 848616 848618, overlap 848618 TCAAAAATATATATA GATTTTTTTG ATT CAGAAAAAAC TTTTTATTTAAAAAA PMT9312_0915 847965 - 849182 + | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)-like PMT9312_0916 849664 - 849191 - | phosphopantetheine adenylyltransferase TERM 626 849572 - 849536 - G 77 -8.2 -3.92324 | opp_overlap 849535, overlap 849537 849567 TCTTTCAAGATTAAA TGTTGGTGTTTTAGAA GTATT TTCTAAAACAGCAACT ACTAGATTGCCAAAT TERM 627 849571 - 849537 - G 88 -11.7 -2.95073 | opp_overlap 849535, overlap 849536 849567 CTTTCAAGATTAAAT GTTGGTGTTTTAGAA GTATT TTCTAAAACAGCAAC TACTAGATTGCCAAA TERM 628 849762 - 849752 - g 90 -4 -5.98781 | TAGAAGCAAAAAAAA TCTT ATT AAGA AAAATACCTCACGGA PMT9312_0917 849724 - 850212 + | hypothetical protein TERM 629 850409 - 850399 - g 91 -5.4 -5.72207 | GGTAAATCAAAAAAA CTAC GCA GTAG AGTAAGTAGTTATTT uvrC 850222 - 852180 + | excinuclease ABC subunit C TERM 630 852446 - 852480 + G 82 -9.5 -3.72141 | opp_overlap 852462 ATGGAAAAAAGGCTG GCTAATATTATCACA ACACC TGGGATGATATTAGC TTTAAGTATGGCTAT PMT9312_0919 852269 - 852835 + | hypothetical protein PMT9312_0920 852828 - 853475 + | phosphoesterase PHP-like PMT9312_0921 857214 - 853477 - | hydrogenobyrinic acid a,c-diamide cobaltochelatase TERM 631 854030 - 854043 + g 84 -5.3 -5.35459 | opp_overlap 854030 TGAACATTTTTAAGA GCATT TTCT AATGC TTTTTTATCCTCTAT TERM 632 856559 - 856575 + g 73 -4.5 -5.04222 | GATAGTCCGCATTTT CTTAATT GCA AGTTAAG TTTTTCGTTTACTTC PMT9312_0922 857287 - 858201 + | branched-chain amino acid aminotransferase PMT9312_0923 858216 - 861782 + | putative methionine synthase PMT9312_0924 862010 - 861792 - | hypothetical protein PMT9312_0925 862108 - 862491 + | hypothetical protein PMT9312_0926 862540 - 863370 + | putative ATP adenylyltransferase PMT9312_0927 863553 - 863374 - | hypothetical protein TERM 633 863629 - 863609 - H 72 -4.1 -5.01422 | opp_overlap 863609 TGACATAAAAATAAA TTGGTTTTA ATT TAAAAACAA TATTCCGTATGGACT PMT9312_0928 863700 - 864710 + | CopG family transcriptional regulator TERM 634 865099 - 865119 + T 95 -12.7 -2.73364 | CTTTTGTGTCTTGCC GTACTGTCT TAA AGACAGTAC TAATTAGACTGAAGC PMT9312_0929 865367 - 865119 - | carboxylesterase-like TERM 635 865455 - 865431 - R 79 -8.8 -3.4878 | opp_overlap 865413 865436 TTATACTAGAATTAA TATTAGACTA GTTTT TAGTCTAATA TAAGACTTTTGGGAA PMT9312_0930 867916 - 865472 - | phenylalanyl-tRNA synthetase beta subunit TERM 636 867107 - 867121 + g 82 -10 -3.32819 | opp_overlap 867105 CTTGTCAAACGCATG CAAGGG TTG CCCTTG TTCTAAAAGTATATA rpmG 868017 - 868211 + | 50S ribosomal protein L33 rpsR 868224 - 868445 + | 30S ribosomal protein S18 TERM 637 869389 - 869379 - g 71 -5.4 -4.5442 | CTTCTAAGTATAAAA TCAG TCT CTGA AATTATTGATTATTC PMT9312_0933 868491 - 869675 + | putative ribonuclease II TERM 638 870394 - 870412 + G 77 -8.2 -3.90684 | opp_overlap 870394, overlap 870382 CCCTGGTTACGATAA CCATACGT TTT ATGTATGG TTTGATGCTTTACTT PMT9312_0934 869744 - 871279 + | methionyl-tRNA synthetase TERM 639 871376 - 871366 - g 72 -2.6 -5.50925 | AAGTAATACAAAAAA TAAA TAC TTTA GATATGAATATTTTC PMT9312_0935 871314 - 871895 + | SMC domain-containing protein PMT9312_0936 872518 - 871892 - | hypothetical protein PMT9312_0937 872629 - 872940 + | fusion glycoprotein F0-like PMT9312_0938 872951 - 873511 + | adenosylcobinamide kinase TERM 640 873746 - 873725 - g 90 -8.9 -4.65933 | overlap 873707 873737 873738 TAGCTTCAAAACAAA CTAAAAGAA TAAT TTCTTTTAG TAAAAAGAATGGAAT PMT9312_0939 873514 - 873996 + | SpoU family tRNA/rRNA methyltransferase clpS 874168 - 874455 + | ATP-dependent Clp protease adaptor PMT9312_0941 875179 - 874781 - | hypothetical protein TERM 641 875196 - 875160 - G 72 -5.9 -4.39889 | opp_overlap 875160 875161, overlap 875161 ATAATTAGACTAAAA TTAGTGTCACACTTGCA CAT TACAAGTGTTGCACTAT ATTTAAATTAAGTCA TERM 642 875195 - 875161 - G 78 -9.4 -3.22849 | opp_overlap 875160 875161, overlap 875160 TAATTAGACTAAAAT TAGTGTCACACTTGCA CAT TACAAGTGTTGCACTA TATTTAAATTAAGTC TERM 643 875161 - 875195 + g 80 -9.4 -3.46783 | opp_overlap 875161 875160, overlap 875160 TAATTAGACTAAAAT TAGTGTCACACTTGCA CAT TACAAGTGTTGCACTA TATTTAAATTAAGTC TERM 644 875848 - 875826 - g 88 -8.6 -4.5028 | AGGATAAGAAAACAA CACTTAATTA TAG TAATCAAGTG AGAGTATCTTATAAG PMT9312_0942 875651 - 875890 + | hypothetical protein PMT9312_0943 876624 - 876845 + | RNA-dependent RNA polymerase-like protein PMT9312_0944 877314 - 877898 + | thioredoxin peroxidase PMT9312_0945 878663 - 877914 - | hypothetical protein TERM 645 877996 - 877966 - G 76 -9.8 -3.16246 | opp_overlap 877973 877974, overlap 877973 877974 877985 TAAAAAATAACCATA TTCAAAAGGGGGAT AAT ATCCCCATTTTGAG GCGTGCGTACAATCC TERM 646 877989 - 877973 - G 70 -6.5 -4.26019 | opp_overlap 877973 877974, overlap 877966 877974 877985 TAACCATATTCAAAA GGGGGAT AAT ATCCCCA TTTTGAGGCGTGCGT TERM 647 877988 - 877974 - G 81 -10 -3.14888 | opp_overlap 877974 877973, overlap 877973 877966 877985 AACCATATTCAAAAG GGGGAT AAT ATCCCC ATTTTGAGGCGTGCG TERM 648 877974 - 877988 + g 81 -10 -3.05597 | opp_overlap 877973 877966 877974 877985, overlap 877973 AACCATATTCAAAAG GGGGAT AAT ATCCCC ATTTTGAGGCGTGCG PMT9312_0946 880457 - 878703 - | ATP-dependent metalloprotease FtsH rpmF 880589 - 880759 + | 50S ribosomal protein L32 PMT9312_0948 881089 - 880763 - | hypothetical protein PMT9312_0949 881840 - 881076 - | putative CbbY PMT9312_0950 882011 - 882358 + | hypothetical protein PMT9312_0951 882355 - 882681 + | hypothetical protein PMT9312_0952 882682 - 882984 + | hypothetical protein PMT9312_0953 883065 - 885284 + | RNA binding S1 TERM 649 885653 - 885626 - g 71 -7.8 -3.55807 | overlap 885619 885624 885627 ATAACAGATCAAATA TTGATATCCCTC CTCA AAGGGATATCAG AGATGCTCAACCTAC TERM 650 885652 - 885627 - g 86 -11.3 -2.724 | overlap 885619 885626 885624 TAACAGATCAAATAT TGATATCCCTC CTCA AAGGGATATCA GAGATGCTCAACCTA PMT9312_0954 885346 - 885789 + | uncharacterized secreted proteins PMT9312_0955 885860 - 886438 + | hypothetical protein PMT9312_0956 886519 - 887691 + | magnesium-protoporphyrin IX monomethyl ester cyclase TERM 651 888981 - 888970 - g 72 -5.8 -4.45765 | TGGAAAATTAACAAA CCCT GTAA AGGG AGCAACTTTGATTGG PMT9312_0957 887723 - 889147 + | putative modulator of DNA gyrase; TldD PMT9312_0958 889151 - 890503 + | putative modulator of DNA gyrase TERM 652 890724 - 890745 + G 72 -6 -4.52415 | opp_overlap 890723 890728, overlap 890728 TTTTATAAATGAACT TAAATCAC TATCCT GTGATTTA TTTATTGTTATAGCT PMT9312_0959 890500 - 891486 + | methionyl-tRNA formyltransferase PMT9312_0960 892193 - 891483 - | hypothetical protein TERM 653 895639 - 895651 + G 81 -9.1 -3.87815 | opp_overlap 895638 895637 TAATTTTAATGAAGG GGAGC TAT GCTCC TTTATAACCATAAGA PMT9312_0961 892268 - 895792 + | transcriptional-repair coupling factor TERM 654 895792 - 895782 - T 81 -2.6 -6.04324 | opp_overlap 895782, overlap 895785 TTAAAAAAGAAAAAA TTAT TAA ATAA TTATTTAAAATCCGC PMT9312_0962 896386 - 896018 - | nucleoside diphosphate kinase-like PMT9312_0963 897067 - 896477 - | hypothetical protein PMT9312_0964 897449 - 897069 - | hypothetical protein PMT9312_0965 897829 - 897632 - | hypothetical protein PMT9312_0966 898989 - 897835 - | 2-octaprenyl-6-methoxyphenol 4-monoxygenase; UbiH-like TERM 655 897883 - 897907 + g 70 -7.4 -3.57263 | opp_overlap 897863 897855 897886, overlap 897863 897886 CATTTGATTAAGGAC TAATTTTCTT ATAAA AAGAAAATTA TTTAAAAGTAAAAAT TERM 656 897950 - 897928 - G 72 -5 -4.81523 | opp_overlap 897926 897928 897930, overlap 897930 AAGTAAAAATGAAAA TTTTCTTATT GGA AATAAGAATA TGTTTCGATTTGCAA TERM 657 898318 - 898307 - G 71 -3 -5.30155 | opp_overlap 898307 TTATCAATCAAAAAA TTCT TATC AGAA TTTAACCTTTCAATA PMT9312_0967 899650 - 899009 - | hypothetical protein PMT9312_0968 900500 - 899652 - | dihydrodipicolinate reductase TERM 658 900500 - 900510 + g 87 -2.6 -6.34424 | overlap 900500 TAGAATTTTCAGTCA TTTT TGA AAAA TTTTTTTTTTAAAAG TERM 659 902289 - 902301 + G 72 -4.9 -4.8543 | opp_overlap 902289 CTTATATATGGAAAA CATTT TGG AAATG TTTTTATAGGCGTTC PMT9312_0969 900603 - 904613 + | magnesium chelatase PMT9312_0970 905476 - 904622 - | dihydropteroate synthase tpiA 906176 - 905451 - | triosephosphate isomerase TERM 660 905825 - 905839 + gr 78 -5.7 -4.88407 | TAAGTCCACTACATT GAGCA AAAAC TGCTC TTTTATTAATTTGTT TERM 661 906071 - 906081 + gr 88 -5.4 -5.45652 | TAACAACTTTACGAT CATC TCT GATG TTTTTTATTAAAGGT PMT9312_0972 906405 - 906229 - | RNA-binding S4 TERM 662 906676 - 906660 - g 71 -2.9 -5.15969 | TTTTAATTCAAAAAA CTGCTCA ATT TGGACAG GATGTATTCATAGCA PMT9312_0973 906464 - 908170 + | multidrug ABC transporter PMT9312_0974 908202 - 908420 + | hypothetical protein PMT9312_0975 911721 - 908425 - | carbamoyl-phosphate synthase large subunit TERM 663 910840 - 910852 + g 70 -6.3 -4.183 | TATTACAATTACTTC TCCAT TAG ATGGA TTTATTGCAAATTGA PMT9312_0976 911830 - 912468 + | hypothetical protein PMT9312_0977 912452 - 912802 + | Iojap-related protein PMT9312_0978 912753 - 913307 + | hypothetical protein TERM 664 913808 - 913791 - g 72 -7.1 -3.76586 | opp_overlap 913785 913791, overlap 913785 913789 CTTCAAATAGAAATA TTCAGAA TTAT TTCTGAA TTACTTGAAATCCCA PMT9312_0979 913308 - 914273 + | L-asparaginase II TERM 665 914403 - 914418 + F 95 -6.8 -5.42514 | opp_overlap 914400 914403 CGCCACCAAATAGGA GCAGCT TAGC GGCTGC TTTTTTAATTTATGC TERM 666 914805 - 914820 + F 72 -6.2 -4.21933 | overlap 914808 GATCTAGGTTCAAGC TTGCTA TCAA TAGCAA TTATTTTGGGATTGA PMT9312_0980 914986 - 915375 + | hypothetical protein PMT9312_0981 915451 - 916446 + | ATPase TERM 667 916538 - 916548 + G 80 -5.4 -5.27779 | TTATGGGCAATTTCA GGAA TTA TTCC TTTTTTCATGTTAAA PMT9312_0982 916436 - 917230 + | putative multidrug efflux ABC transporter TERM 668 917543 - 917553 + G 70 -4 -5.00138 | TACTTTTAAAGCCTA TTGA TAG TCAA TTTTTCATTTCCCTA PMT9312_0983 917227 - 918021 + | membrane protein, multidrug efflux associated PMT9312_0984 918295 - 918029 - | hypothetical protein PMT9312_0985 918522 - 918295 - | hypothetical protein TERM 669 918789 - 918808 + r 100 -9.2 -5.63504 | GGTTCCCCATCACCC GGCCCCAC GTTT GTGAGGCC TTTTTTTATAGGGTT PMT9312_0986 919786 - 918974 - | hypothetical protein PMT9312_0987 919922 - 920263 + | HNH nuclease PMT9312_0988 920958 - 920557 - | ATP synthase protein 8-like PMT9312_0989 921365 - 921592 + | hypothetical protein TERM 670 922044 - 922032 - g 76 -3.5 -5.32565 | overlap 922025 922024 TAATGAACTAAAAAA TAAAA ATT TTTTA ATTAAAAGACCTTCC PMT9312_0990 921817 - 922320 + | josephin-like TERM 671 922520 - 922493 - f 93 -3.4 -6.17292 | overlap 922500 AAACCTAAAAAAAAA TACTAATTGCCC AAAT GAGCAGGTAGTA GCGCTTTTAAGTGTA PMT9312_0991 922582 - 922977 + | putative purine phosphoribosyltransferase related protein TERM 672 923163 - 923190 + G 85 -10.8 -3.35679 | CGTAATTTCCATGAT TTGCAAAAATGT GATT GCATTTTTGCAA TTGTGAATGGAACGC TERM 673 923220 - 923203 - g 77 -9.1 -3.18199 | CAATTGTGAATGGAA CGCCTCC AGAT GAAGGCG TAATGATTGAATTAG PMT9312_0992 922974 - 923438 + | hypothetical protein TERM 674 923497 - 923481 - f 70 -3.7 -5.19003 | AATATAAAAAATAAA TCTGACA AGG TGTTAGA ATATAACTTTATTAA rpsU 923520 - 923696 + | 30S ribosomal protein S21 PMT9312_0994 924084 - 923764 - | helix-hairpin-helix DNA-binding, class 1 TERM 675 924292 - 924275 - H 73 -3.5 -5.4477 | opp_overlap 924285 AAAGTTTTAAAAAAA GAAAAAT GGTT ACTTTTC AAAATAAAAAGTATT TERM 676 924836 - 924823 - g 81 -3.9 -5.66868 | AATCAAGCAAAAAAA GATTT CTTA AAATC ATGGGATATTTATTA PMT9312_0995 924355 - 924948 + | uridine kinase PMT9312_0996 926107 - 924941 - | hypothetical protein PMT9312_0997 926932 - 926135 - | amphipathic helix repeat-containing protein TERM 677 926691 - 926701 + g 74 -4 -5.30199 | opp_overlap 926691, overlap 926685 AAAAAATCTAAAAAA TCAT AAT ATGA TTTTTCTTCATTTTT TERM 678 926701 - 926691 - G 77 -4 -5.32608 | opp_overlap 926691 926685 AAAAAATCTAAAAAA TCAT AAT ATGA TTTTTCTTCATTTTT PMT9312_0998 927234 - 926965 - | hypothetical protein TERM 679 927224 - 927206 - G 74 -6.2 -4.35116 | opp_overlap 927195 927208, overlap 927194 GATCTCATATCAAAA TATTTAAT ATG ATTAAATA ATATAAGCAAAAAGG TERM 680 927607 - 927589 - g 89 -11.8 -3.01924 | TACTTCTGGTTAATA TGCATCCT AAA AGGATGCA GAAAGAACTTCCATT PMT9312_0999 927363 - 927767 + | hypothetical protein PMT9312_1000 928470 - 927790 - | hypothetical protein TERM 681 928348 - 928358 + g 70 -4 -5.04265 | TCCAGATGCTGTAGG TATG AAG CATA TTTTTGGTCTTTTTT PMT9312_1001 928476 - 928955 + | acetyltransferase PMT9312_1002 928965 - 929288 + | hypothetical protein PMT9312_1003 929646 - 929966 + | hypothetical protein TERM 682 930039 - 930026 - T 70 -3.9 -5.19275 | opp_overlap 930026, overlap 930038 ATCTATAAAAGAAAA GATAA AAAC TTATC TTCTTCAAAAACTAC PMT9312_1004 930654 - 930385 - | hypothetical protein TERM 683 930720 - 930733 + r 78 -6.7 -4.57516 | opp_overlap 930720, overlap 930715 CGCACAAAAAAAAAA GACTC TAAT GAGTC TTTTAATTTAAATCT TERM 684 930733 - 930720 - R 100 -6.7 -6.48081 | opp_overlap 930715 930720 CGCACAAAAAAAAAA GACTC TAAT GAGTC TTTTAATTTAAATCT PMT9312_1005 930903 - 930766 - | hypothetical protein PMT9312_1006 931111 - 931491 + | hypothetical protein PMT9312_1007 931597 - 931782 + | hypothetical protein PMT9312_1008 931825 - 932127 + | hypothetical protein PMT9312_1009 932194 - 932910 + | hypothetical protein TERM 685 933317 - 933306 - g 73 -4.4 -4.96848 | CTGGGGAGATAAAAA CACA TCTT TGTG AATGTGAAGATAATA PMT9312_1010 933062 - 933346 + | hypothetical protein TERM 686 933670 - 933657 - g 75 -2.5 -5.66989 | TAAACAGCAAAAAAA TAATT TAGA AATTA AAAATATAAATAAAG TERM 687 933752 - 933732 - g 90 -9.1 -4.64464 | TAAACCAAAGGAAAA TACATCCCT TTT AGGAATGTA TGAGAGCAATGGAAT PMT9312_1011 933397 - 936003 + | peptidase M, neutral zinc metallopeptidase, zinc-binding site PMT9312_1012 936395 - 936556 + | photosystem II reaction center N protein-like PMT9312_1013 936767 - 936570 - | hypothetical protein purT 938036 - 936861 - | phosphoribosylglycinamide formyltransferase 2 TERM 688 937507 - 937520 + g 73 -8.1 -3.55524 | overlap 937503 CTAGAATTTGCTTGT GCCTG ACTC CAGGC TTGATTTAAATCATT TERM 689 937522 - 937533 + g 71 -3 -5.14563 | overlap 937503 GCCTGACTCCAGGCT TGAT TTAA ATCA TTTTTTGATCCAACC PMT9312_1015 938291 - 938049 - | lectin subunit alpha PMT9312_1016 938437 - 938916 + | glutathione peroxidase TERM 690 938996 - 938982 - T 70 -7.2 -3.48718 | overlap 938980 TTGAATCAAAAGATA GACAAA AAT TTTGTC GAAATAAATTTTGGA PMT9312_1017 939722 - 939048 - | hypothetical protein PMT9312_1018 940162 - 939770 - | hypothetical protein TERM 691 940330 - 940320 - H 71 -2.6 -5.46129 | TAATAAATTAAAAAA TATT TAA AATA ATATGTCTTCAGATA PMT9312_1019 940333 - 941340 + | dihydrouridine synthase TIM-barrel protein nifR3 PMT9312_1020 941359 - 941613 + | hypothetical protein PMT9312_1021 942087 - 941848 - | hypothetical protein PMT9312_1022 942425 - 942189 - | hypothetical protein PMT9312_1023 942533 - 942952 + | 4-hydroxybenzoyl-CoA thioesterase family protein PMT9312_1024 942995 - 943192 + | hypothetical protein PMT9312_1025 943221 - 943484 + | hypothetical protein TERM 692 943662 - 943648 - T 80 -5 -5.32882 | TAGGATTATAAAAAA TGGACT GGC AATCCA CCTCTTGATGAAATA PMT9312_1027 944693 - 944289 - | hypothetical protein TERM 693 944491 - 944513 + g 74 -9.2 -3.14848 | overlap 944490 AGGCATCCAGGGGCA TGTAGGGAAA TAC TTTCCCAACA ATTTTGATGACACCA TERM 694 944950 - 944930 - H 70 -2 -5.55698 | gap 1, overlap 944932 CAGAATCTAAAAAAA GACTAAAAA CTTC TTTTTAG-C ATCAAAATTTTAAAT TERM 695 944949 - 944932 - H 71 -5.7 -4.40173 | overlap 944930 GAATCTAAAAAAAGA CTAAAAA CTTC TTTTTAG CATCAAAATTTTAAA PMT9312_1028 945072 - 945365 + | virion host shutoff protein-like PMT9312_1029 945701 - 945985 + | hypothetical protein TERM 696 946461 - 946472 + F 80 -4.4 -5.5112 | TCTACCACCACTTTC GGTT GTAT AACC TTTTTTATTCATAAG TERM 697 946508 - 946493 - f 77 -4.8 -5.20333 | opp_overlap 946493 TATTCATAAGAAAAA TAATCT ATGC AGATTA TCTCATGTAAAAAAG TERM 698 946514 - 946544 + F 79 -8.6 -3.70068 | opp_overlap 946509 946524 946525, overlap 946524 946525 ATGCAGATTATCTCA TGTAAAAAAGTTTT TTA AAAAATTTTTTACA TTTAGAATTATAATA TERM 699 946702 - 946746 + F 73 -3.9 -5.36441 | opp_overlap 946745, overlap 946704 GATTTCTCTATGTTT CATTTTTAGTAATTTCTTAAT TAA ATTATAAAGTTACTAAAAATA TTTTTTGTATAAAAA TERM 700 946704 - 946744 + F 72 -6.5 -4.31943 | overlap 946702 TTTCTCTATGTTTCA TTTTTAGTAATTTCTTAAT TAA ATTATAAAGTTACTAAAAA TATTTTTTGTATAAA TERM 701 946764 - 946745 - f 74 -5.2 -4.78764 | opp_overlap 946702 TAAAGTTACTAAAAA TATTTTTT GTAT AAAAAATA TCAAAATAGAGTTCT TERM 702 947286 - 947274 - f 71 -4.9 -4.77438 | ACTTATGATCAAAAA TTTAG TTC CTAAA TAAATGTCAGATAAA PMT9312_1030 947290 - 947472 + | hypothetical protein PMT9312_1031 947558 - 948328 + | pili assembly chaperone-like TERM 703 948389 - 948379 - f 71 -2.6 -5.59564 | AGAAATCTAAAAAAA TTTA TTT TAAA GATTTATTAATAAAT PMT9312_1032 948459 - 948773 + | hypothetical protein PMT9312_1033 949424 - 949050 - | hypothetical protein PMT9312_1034 949604 - 949810 + | hypothetical protein TERM 704 949844 - 949865 + F 77 -7.5 -4.27886 | opp_overlap 949844 949843, overlap 949827 949834 AATCTTTAAAAAGAT TTAATTTTC TTAA GAAAATTAA TTTGTATATTTGAGG PMT9312_1035 950101 - 950343 + | lactate/malate dehydrogenase, alpha/b-like TERM 705 950603 - 950587 - g 80 -9.5 -3.54741 | GATCACTTTGGCAAA GGTGAAA GTT TTTCACC AACTGATTTATTAGC PMT9312_1036 950479 - 950886 + | putative stress-induced protein OsmC PMT9312_1037 951383 - 951099 - | hypothetical protein PMT9312_1038 951906 - 951523 - | hypothetical protein TERM 706 952074 - 952056 - H 100 -5.3 -6.07627 | opp_overlap 952056 ATCCTCAAAAAAAAA GATCCCT AATAA AGAGATC TTTTTAAAATTGATT TERM 707 952252 - 952227 - H 83 -4 -5.94743 | overlap 952230 CAAAAAAAACAAAAA GTACTCAAAC ATCGAG GTCGGAGTAC TTTTAAAGTTATCAG PMT9312_1039 952775 - 953023 + | hypothetical protein PMT9312_1040 954039 - 953254 - | ABC transporter PMT9312_1041 954057 - 954491 + | ferric uptake regulator family protein PMT9312_1042 955275 - 954505 - | ABC transporter ATP-binding protein TERM 708 956747 - 956726 - g 76 -7.3 -4.2586 | CTAGATGAAGAGAAA GTTCAGGCA ATAT TTCCTGAAC AAATTCCAGCATCTA PMT9312_1043 955412 - 956962 + | ABC transporter substrate-binding protein TERM 709 957595 - 957581 - g 71 -8.6 -2.79952 | overlap 957574 957578 ATATGAACCGAATGA CTCGAA TTA TTCGAG CCGAGAATGCCAAAG TERM 710 957980 - 957967 - g 85 -6.7 -5.10064 | opp_overlap 957967 CTGAACATAGAAAAA CCAAC AAAA GTTGG TTTGTTTACACAGCA TERM 711 957967 - 957980 + G 78 -6.7 -4.41348 | opp_overlap 957967 CTGAACATAGAAAAA CCAAC AAAA GTTGG TTTGTTTACACAGCA PMT9312_1044 957040 - 958389 + | cobalamin synthesis protein/P47K TERM 712 959322 - 959288 - g 78 -9.3 -3.37655 | gap 1, opp_overlap 959298, overlap 959286 TTTCCTAAAAAATGA CGGC-AATGGAGACCC AGTT GGGGCTGCATTCGCCG GAGATTTAGTAGGGG PMT9312_1045 958377 - 959450 + | WD-40 repeat-containing protein TERM 713 960123 - 960094 - f 91 -12.3 -3.25762 | opp_overlap 960099 960120, overlap 960099 AAAATAAGTAAGAGA TAAAAGAGGGCTT AAAT AAGCCCTCTTTTT TTATAAAAAAATTAG TERM 714 960099 - 960118 + F 100 -12.2 -5.60993 | opp_overlap 960099 960094 AAGTAAGAGATAAAA GAGGGCTT AAAT AAGCCCTC TTTTTTTATAAAAAA TERM 715 960118 - 960099 - f 100 -12.2 -4.70453 | opp_overlap 960099, overlap 960094 AAGTAAGAGATAAAA GAGGGCTT AAAT AAGCCCTC TTTTTTTATAAAAAA TERM 716 960260 - 960242 - g 80 -7.4 -4.67904 | opp_overlap 960242 960244 960245, overlap 960245 TATCAATTTCAAAAA GAGTCCAA AAA TGGGACTC TCATATGTGGATTGT TERM 717 960453 - 960434 - g 70 -8 -3.08446 | overlap 960423 960433 960444 CAAGCAAATAAGAAT TCTTTGAT AATT ATCAAAGA TAAAATTTCATAAAG PMT9312_1046 960191 - 960466 + | DNA gyrase/topoisomerase IV, subunit-like PMT9312_1047 960725 - 960492 - | hypothetical protein PMT9312_1048 960993 - 960757 - | hypothetical protein PMT9312_1049 961121 - 962563 + | hypothetical protein TERM 718 963010 - 963034 + G 75 -9.4 -2.82749 | overlap 963009 GAATTACAGATGCCA CTCTAAGCAA AGACC TTGCTTGGAG ATTTAGCATTCTTGG PMT9312_1050 962565 - 963506 + | hypothetical protein TERM 719 964026 - 964014 - g 71 -9.1 -2.50859 | overlap 964013 964009 CTAAAAGACACACAG GGCCA GCA TGGCC AGCGAGCAGAACACT PMT9312_1051 963518 - 964375 + | transglutaminase-like PMT9312_1052 964551 - 965024 + | hypothetical protein PMT9312_1053 965108 - 965626 + | hypothetical protein PMT9312_1054 965989 - 965636 - | lipoprotein-like TERM 720 965989 - 966001 + g 79 -3.5 -5.71295 | CTAAAAATATATTCA TTAAA CTA TTTAA TTTTTATTTTTATAT TERM 721 966146 - 966129 - R 78 -4.2 -5.37171 | opp_overlap 966144 AATAGTAAATAAAAA GAAAAC AATAAG GTTTTC TACAAGAATATTTTT PMT9312_1055 967071 - 966202 - | PfkB family carbohydrate kinase PMT9312_1056 967113 - 967484 + | hypothetical protein PMT9312_1057 968710 - 967481 - | major facilitator superfamily multidrug-efflux transporter-like TERM 722 969665 - 969679 + G 72 -5.7 -4.52589 | TGGGGCATTCACTTG GTGCT TTAAT AGCAC TTTTATATGAGGGCA PMT9312_1058 968713 - 970263 + | putative dienelactone hydrolase PMT9312_1059 971282 - 970260 - | putative ABC transporter, oligopeptides PMT9312_1060 972846 - 971275 - | ABC transporter substrate-binding protein PMT9312_1061 973115 - 972864 - | hypothetical protein PMT9312_1062 974487 - 973186 - | homoserine dehydrogenase PMT9312_1063 974951 - 974532 - | hypothetical protein PMT9312_1064 975548 - 974991 - | hypothetical protein TERM 723 975303 - 975277 - G 89 -11.8 -3.01924 | opp_overlap 975275 975275 GAGTCTTTTGTAAGA GTTTTTTCATCC CAT GGATAAAAAAAC AACTCTTTCTTATCT PMT9312_1065 976031 - 975558 - | Holliday junction endonuclease RuvC PMT9312_1066 977125 - 976037 - | protoporphyrin IX magnesium chelatase subunit ChlI PMT9312_1067 977995 - 977246 - | RNA methyltransferase TrmH, group 1 PMT9312_1068 978378 - 977992 - | cytochrome cM petG 978434 - 978553 + | cytochrome b6-f complex subunit PetG PMT9312_1070 979129 - 978530 - | hypothetical protein hisH 979760 - 979143 - | imidazole glycerol phosphate synthase subunit HisH PMT9312_1072 980090 - 979767 - | thioredoxin TERM 724 980204 - 980189 - R 100 -10.4 -5.54264 | opp_overlap 980188 980187 AAATATCTAAAAAAA GCCCGA ATAA TCGGGC GATTTAGTGTGTGAG TERM 725 980225 - 980238 + r 100 -8.1 -5.1861 | overlap 980226 AGTGTGTGAGGAGTA TGGGG TTTC CCCCA TTTTTTAATAATAAC PMT9312_1073 981485 - 980322 - | inositol-5-monophosphate dehydrogenase TERM 726 983021 - 983007 - g 71 -7.8 -3.4691 | overlap 982990 982989 AGTTAAGAAGATTAA CCGCCT TAG AGGCAG ATAAAATCAAAGCGG PMT9312_1074 981665 - 984256 + | DNA gyrase subunit A TERM 727 985003 - 984989 - g 72 -2.8 -5.4477 | opp_overlap 984977, overlap 984977 984978 984991 AAAGTCTTAAAAAAA GACTTT TTA AAAGAC TTAATAGTAAGGGTA PMT9312_1075 984286 - 985497 + | lycopene cyclase (CrtL-type) PMT9312_1076 987085 - 985502 - | hypothetical protein TERM 728 985609 - 985583 - G 74 -9.6 -2.72613 | opp_overlap 985583 985590, overlap 985582 AAATTTTAAATTAAT GTTGGAATGATT TTT AATCATTTCAAC TAATTTCCAGAACCT TERM 729 985583 - 985609 + g 88 -11.8 -2.90615 | opp_overlap 985583 985582, overlap 985590 AAATTTTAAATTAAT GTTGGAATGATT TTT AATCATTTCAAC TAATTTCCAGAACCT TERM 730 986123 - 986144 + g 72 -5.9 -4.42386 | opp_overlap 986109, overlap 986109 AGCATCAGCATGTTC TGAAGCC TTCTTTTT GGCTTCA TTTTCTAAGTAAAAC TERM 731 987146 - 987132 - H 72 -7.2 -3.82764 | AAAAATCAAAATTAA CCTTTT ATA AAAAGG AAGCTTTAATCTTAA TERM 732 987162 - 987190 + H 78 -3.3 -5.7946 | opp_overlap 987149 987167, overlap 987167 AAGCTTTAATCTTAA AACAATACTTTAA TAA TTAAAGTATTTTA TTTTTTTCTTCAGAA TERM 733 987185 - 987167 - H 77 -7.6 -4.21933 | opp_overlap 987162 987167 TTAATCTTAAAACAA TACTTTAA TAA TTAAAGTA TTTTATTTTTTTCTT TERM 734 987167 - 987185 + H 100 -7.6 -5.64328 | opp_overlap 987167, overlap 987162 TTAATCTTAAAACAA TACTTTAA TAA TTAAAGTA TTTTATTTTTTTCTT PMT9312_1077 987312 - 988952 + | 2-isopropylmalate synthase PMT9312_1078 989034 - 989426 + | adenoviral fiber protein-like PMT9312_1079 990907 - 989435 - | metal dependent phosphohydrolase TERM 735 990338 - 990323 - G 71 -5.4 -4.67353 | CCATTGACTTAAAAA TGCTCC AATG GGAACA AAAATTGATAGTTGG TERM 736 990734 - 990724 - G 81 -4 -5.52096 | opp_overlap 990724 AAAGCCAAGAAAAAA TATC TAA GATA TTTAAAGGCGAAATA PMT9312_1080 990982 - 991878 + | methenyltetrahydrofolate cyclohydrolase PMT9312_1081 991916 - 992818 + | polyprenyl synthetase PMT9312_1082 992832 - 993311 + | hypothetical protein PMT9312_1083 994699 - 993308 - | hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase PMT9312_1084 996004 - 994703 - | putative glucose 6-phosphate dehydrogenase effector OpcA TERM 737 995435 - 995463 + g 100 -10.6 -4.85267 | opp_overlap 995433 995438 CCACAACCAAGAAGG TAATTGATCAAT AGATA ATTGATCAATTA TTTTTAATCCTTTAT PMT9312_1085 997530 - 996007 - | glucose-6-phosphate 1-dehydrogenase TERM 738 996985 - 997002 + g 82 -4.9 -5.47399 | TTCTTCAGCACAACT TTGAACG ATCT TGTTCAA TTTTTTTGCACTTGA TERM 739 997527 - 997543 + g 71 -2.3 -5.44721 | opp_overlap 997530, overlap 997530 TACTTAAAGTTGAAG GCATATT TTT AATATTC TTTTTTTAAAATCCT PMT9312_1086 998752 - 997640 - | ferredoxin-NADP oxidoreductase (FNR) TERM 740 998840 - 998855 + H 78 -3.4 -5.63236 | GTTTTGAGATCGGAA TAATTT AATC AAATTA TTTTTATTTTTCAAT TERM 741 999173 - 999140 - g 75 -2.5 -5.63103 | overlap 999144 999150 TTTCAAGCAAAAAAA TATATCAAAAGAACA ATAA TGTCCATTTGAAACA AGTTGGGGCACAAGA PMT9312_1087 998935 - 999462 + | hypothetical protein PMT9312_1088 1000720 - 999602 - | adaptive-response sensory kinase PMT9312_1089 1000827 - 1001369 + | hypothetical protein TERM 742 1001373 - 1001404 + F 81 -9 -3.7511 | opp_overlap 1001372 1001370 1001373, overlap 1001375 ATTATTAAGTAAGAT CTTTTTAACTATTA ATAT TAATAGTTAAAATG TTATCTTGTAGGAAA TERM 743 1001404 - 1001373 - f 72 -9 -2.56164 | opp_overlap 1001373 1001375, overlap 1001372 1001370 ATTATTAAGTAAGAT CTTTTTAACTATTA ATAT TAATAGTTAAAATG TTATCTTGTAGGAAA TERM 744 1001375 - 1001402 + F 82 -10.2 -3.45788 | opp_overlap 1001373 1001372 1001370, overlap 1001373 TATTAAGTAAGATCT TTTTAACTATTA ATAT TAATAGTTAAAA TGTTATCTTGTAGGA PMT9312_1090 1001402 - 1001872 + | Villin headpiece domain-containing protein PMT9312_1091 1002877 - 1001882 - | ribose-phosphate pyrophosphokinase TERM 745 1002092 - 1002073 - G 72 -7.2 -3.85857 | gap 1, opp_overlap 1002071 1002069 1002066 1002089, overlap 1002071 1002075 AAGGAGGAGAAAATA CAGCATGTG AGG CACATGC-G AATATTCTATTAGCG TERM 746 1002091 - 1002075 - G 87 -10.9 -3.50302 | opp_overlap 1002071 1002069 1002066 1002089, overlap 1002073 1002071 GGAGGAGAAAATACA GCATGTG AGG CACATGC GAATATTCTATTAGC TERM 747 1003261 - 1003251 - g 80 -5.4 -5.26918 | AGATTGGATAAAAAA GCTT CAT AAGC ATGGGATCGAATACT PMT9312_1092 1003132 - 1004652 + | putative 4-alpha-glucanotransferase PMT9312_1093 1005162 - 1004668 - | hypothetical protein PMT9312_1094 1006941 - 1005283 - | kinase-like PMT9312_1095 1007006 - 1008397 + | arginine decarboxylase PMT9312_1096 1008413 - 1009270 + | phosphatidate cytidylyltransferase PMT9312_1097 1010181 - 1009282 - | alpha/beta hydrolase fold protein PMT9312_1098 1011281 - 1010190 - | putative glycerol dehydrogenase TERM 748 1011317 - 1011302 - R 75 -7.6 -4.14392 | opp_overlap 1011302 TTTTAATGCCTAAAA GTTAGC ACTT GCTAAC TCTTGAGAAGACTCT PMT9312_1099 1013824 - 1011296 - | Clp protease ATP-binding subunit TERM 749 1012882 - 1012897 + g 71 -7.6 -3.41051 | CATCGAGTGTTGTTG CTCCAA TACA TTGGAG TTCTCCTCGGGCTAA PMT9312_1100 1014444 - 1014004 - | SSU ribosomal protein S18P alanine acetyltransferase TERM 750 1014566 - 1014548 - g 95 -5.4 -6.11243 | ATGGAAGAAAAAAAA TCCTTTTT AAA AAAAAAGA TTGACCTCAAAAGTC PMT9312_1101 1014533 - 1015906 + | diaminopimelate decarboxylase TERM 751 1015989 - 1016001 + G 72 -3.3 -5.12916 | GATGTTTTATTCGCT GTCGG TTT CGGAC TTTTATTATTTTCTA TERM 752 1016688 - 1016670 - g 73 -9 -2.83894 | opp_overlap 1016670 1016669 ATTACCAGTAGTAGA TTACAAGA ACT TCTTGTAA ATTTAATAGGGAATC TERM 753 1016670 - 1016688 + G 73 -9 -2.8372 | opp_overlap 1016670, overlap 1016669 ATTACCAGTAGTAGA TTACAAGA ACT TCTTGTAA ATTTAATAGGGAATC PMT9312_1102 1015935 - 1016840 + | hypothetical protein PMT9312_1103 1016844 - 1017647 + | undecaprenyl pyrophosphate synthetase PMT9312_1104 1017654 - 1018661 + | biotin synthase TERM 754 1019282 - 1019261 - g 70 -4.5 -4.85782 | TTGCTTAAAAAGAAA GGTTATAAA AATA TTTATCACC TACAAGGGGGCATCC PMT9312_1105 1018658 - 1019590 + | rhodanese-like protein PMT9312_1106 1019602 - 1020102 + | hypothetical protein PMT9312_1107 1020998 - 1020099 - | lipoyl synthase PMT9312_1108 1021601 - 1021002 - | DNA replication and repair protein RecR PMT9312_1109 1021705 - 1022262 + | photosystem II oxygen evolving complex protein PsbP PMT9312_1110 1024050 - 1022278 - | ATPase TERM 755 1022497 - 1022512 + g 73 -9 -2.94464 | opp_overlap 1022477 1022496 1022497, overlap 1022490 TGTTTCATTATCAAC TGAGGC CGTA GCCTCA TCTAATATTAATATT TERM 756 1022512 - 1022497 - G 71 -9 -2.52516 | opp_overlap 1022497 1022490, overlap 1022477 1022496 TGTTTCATTATCAAC TGAGGC CGTA GCCTCA TCTAATATTAATATT PMT9312_1111 1024351 - 1024061 - | hypothetical protein PMT9312_1112 1026142 - 1024361 - | DEAD/DEAH box helicase-like TERM 757 1024921 - 1024945 + g 75 -5.1 -5.06505 | overlap 1024923 1024939 TCTTAGTTCTTGTTG AGTTTTCTAAG TTT CTTAGAAAATG TTTTTCTCTATGATT TERM 758 1024923 - 1024943 + g 90 -9.9 -4.14422 | overlap 1024921 1024939 TTAGTTCTTGTTGAG TTTTCTAAG TTT CTTAGAAAA TGTTTTTCTCTATGA PMT9312_1113 1027981 - 1026281 - | DNA helicase/exodeoxyribonuclease V, alpha subunit PMT9312_1114 1031609 - 1027983 - | DNA helicase/exodeoxyribonuclease V, beta subunit TERM 759 1029854 - 1029866 + g 72 -4.9 -4.75954 | AACTTGCTTCTGTAT CAAAA ATA TTTTG TTTATTTTGAATTTT TERM 760 1029892 - 1029905 + g 87 -2.5 -6.38039 | ATTTTGCATGGGAGG TTAAA CTGA TTTAA TTTTTTTTTTAAATC PMT9312_1115 1032095 - 1031622 - | hypothetical protein PMT9312_1116 1035281 - 1032099 - | DNA helicase/exodeoxyribonuclease V, gamma subunit PMT9312_1117 1035616 - 1035299 - | hypothetical protein PMT9312_1118 1036341 - 1035625 - | pyridoxal phosphate biosynthetic protein PdxJ PMT9312_1119 1036442 - 1037116 + | phospholipid/glycerol acyltransferase PMT9312_1120 1037160 - 1037675 + | hypothetical protein PMT9312_1121 1037688 - 1037918 + | BolA-like protein PMT9312_1122 1037922 - 1038245 + | glutaredoxin-like protein PMT9312_1123 1038563 - 1038294 - | hypothetical protein TERM 761 1038355 - 1038373 + g 74 -7.5 -3.81461 | opp_overlap 1038354 GGATCAATAAAACTT GATGGAT CTAAA ATCCATC TTTCAATTAATCTTT TERM 762 1038909 - 1038921 + G 73 -7.7 -3.69663 | CTGCAATGAGACTTG CCCAA CAG TTGGG TTCTTCAGTAATAGT PMT9312_1124 1038650 - 1039387 + | two component transcriptional regulator PMT9312_1125 1039890 - 1039384 - | hypothetical protein PMT9312_1126 1041446 - 1039902 - | putative carotenoid isomerase PMT9312_1127 1042883 - 1041471 - | tRNA (uracil-5-)-methyltransferase Gid pbsY 1043008 - 1042895 - | photosystem II protein Y PMT9312_1129 1043740 - 1043886 + | hypothetical protein TERM 763 1043912 - 1043951 + T 86 -8.9 -4.22883 | opp_overlap 1043912 CATTAGTCGTTTAAA TTGATAGATTACAAAAA AATAAA TATTTGTAGTCTATCAA TTATTTTGAATAATC TERM 764 1044477 - 1044504 + T 85 -11.4 -3.10017 | opp_overlap 1044482, overlap 1044482 ATTTTTTGAAAAATA AAAAAGACCTGC ATAA GCAGGTCTTTTC TGTGTATTGGAGGTT TERM 765 1044482 - 1044499 + T 100 -11.3 -4.68124 | opp_overlap 1044482, overlap 1044477 TTGAAAAATAAAAAA GACCTGC ATAA GCAGGTC TTTTCTGTGTATTGG TERM 766 1044499 - 1044482 - T 100 -11.3 -5.93252 | opp_overlap 1044482 1044477 TTGAAAAATAAAAAA GACCTGC ATAA GCAGGTC TTTTCTGTGTATTGG PMT9312_1130 1045694 - 1044540 - | porin precursor-like TERM 767 1044630 - 1044661 + g 71 -9 -2.53715 | gap 1, overlap 1044629 1044632 TAATGGAGTAATTGT CATACTATCGTTTAC TGG GTAAGC-ATAGTATG CTTCGTACTGATACA TERM 768 1045828 - 1045794 - R 90 -11.7 -3.01712 | gap 1, opp_overlap 1045797 1045802, overlap 1045778 1045802 TTGTCCCTTTGAAGA CA-AAAAAAGACCTGC ATAA GCAGGTCTTTTCTGTG TATTGGAGGTTTCTA TERM 769 1045797 - 1045824 + r 85 -11.4 -3.10017 | opp_overlap 1045794 1045802, overlap 1045802 TCCCTTTGAAGACAA AAAAAGACCTGC ATAA GCAGGTCTTTTC TGTGTATTGGAGGTT TERM 770 1045802 - 1045819 + r 100 -11.3 -4.68124 | opp_overlap 1045794 1045802, overlap 1045797 TTGAAGACAAAAAAA GACCTGC ATAA GCAGGTC TTTTCTGTGTATTGG TERM 771 1045819 - 1045802 - R 100 -11.3 -5.80817 | opp_overlap 1045802 1045797, overlap 1045794 TTGAAGACAAAAAAA GACCTGC ATAA GCAGGTC TTTTCTGTGTATTGG PMT9312_1131 1046975 - 1045860 - | porin precursor-like TERM 772 1045950 - 1045981 + g 71 -9 -2.53715 | gap 1, overlap 1045949 1045952 TAATGGAGTAATTGT CATACTATCGTTTAC TGG GTAAGC-ATAGTATG CTTCGTACTGATACA TERM 773 1047119 - 1047098 - R 70 -5.3 -4.62203 | GTTAAACAATCAAAA TCTATAAAA TTTT TTTTACAGA ATGGGGGTATTTATA PMT9312_1132 1048477 - 1047788 - | hypothetical protein TERM 774 1047977 - 1047962 - G 95 -4.8 -6.28967 | GACAAATAAAAAAAA TAAAGA TAAA TCTTTA GAAGGGAAGGCATTA TERM 775 1048446 - 1048458 + g 71 -5.5 -4.72863 | overlap 1048447 ACTTCTGGAATTATT TTCCC CCA GGGAG TTTTAATTTCTTTAG PMT9312_1133 1049131 - 1048619 - | adenine phosphoribosyltransferase TERM 776 1048875 - 1048891 + g 76 -6.5 -4.65078 | TTTGTAACTAATTCT CCTGGAA GTT TGCCAGG TTTTCTTGCAACTAT PMT9312_1134 1051262 - 1049583 - | hypothetical protein TERM 777 1050112 - 1050086 - G 85 -11 -3.30635 | opp_overlap 1050085 1050106 CAAATGTTTCCATAA CATATGCCAAAT TGA ATCCGGCATATG GTGCTTCATAATTGC PMT9312_1135 1051556 - 1052521 + | hypothetical protein TERM 778 1052759 - 1052777 + T 100 -8.2 -5.4505 | opp_overlap 1052759 AACCAAGTCATACAA GAGAGTTT CCC AGACTCTC TTTTTTATTGCCAAG PMT9312_1136 1053208 - 1052894 - | hypothetical protein TERM 779 1053100 - 1053112 + g 74 -4.1 -5.18726 | opp_overlap 1053100, overlap 1053104 CTATTAAAAACTTAA CTTGG TTC TCAAG TTTTTCTTGTGGAAC TERM 780 1053230 - 1053215 - H 88 -6.1 -5.28778 | opp_overlap 1053215 1053213 AGGACTCATAAAAAA GAGGG TTTTAT CCCTC TATTTTAGATCGACT PMT9312_1137 1053412 - 1053798 + | hypothetical protein PMT9312_1138 1054415 - 1053894 - | heat shock protein DnaJ-like TERM 781 1054742 - 1054760 + r 100 -6.7 -5.45652 | AACCAAGTCATGCTA GCGAGTT ACCCA GACTCGC TTTTTTATTGGAAAT PMT9312_1139 1055295 - 1054936 - | hypothetical protein TERM 782 1054982 - 1054992 + g 87 -5.4 -5.63236 | TTAAACCATTTCATA GCTA ATC TAGC TTTTTCTTTTTCAGT PMT9312_1140 1056022 - 1055543 - | hypothetical protein TERM 783 1055623 - 1055636 + g 80 -5.3 -5.28778 | CAAAAACTAAGGATT CATGA TTTC TCATG TTTTTTATAAATGAT PMT9312_1141 1056885 - 1056019 - | hypothetical protein TERM 784 1057186 - 1057204 + r 100 -6.7 -5.45652 | opp_overlap 1057186 AACCAAGTCATACTA GCGAGTT ACCCA GACTCGC TTTTTTATTGGAAAT TERM 785 1057286 - 1057259 - R 100 -12.9 -4.06687 | ATCGCCGACAAATAA TGCAGGATTTG TCATGT CAAATCCTGCA ATATCCCGCAACTAT TERM 786 1057326 - 1057337 + r 72 -7.2 -3.71924 | GTCTGTAGACATAGT GCCC AAAT GGGC TTGTTAAGTGCTTTG PMT9312_1142 1057612 - 1057487 - | hypothetical protein TERM 787 1057645 - 1057620 - R 77 -4.7 -5.243 | TAAACCATTAAAAAA GTCAGCCCATA TCCC TACTAGCTGAC TTTCATGACGATGTA PMT9312_1143 1057914 - 1057780 - | high light inducible protein-like TERM 788 1057862 - 1057880 + g 72 -2.5 -5.32944 | gap 1 ATCGCAAATCTACCA TTG-AGCT TCTC AGCTACAA TTTTTTCCTTCTCAA TERM 789 1058940 - 1058924 - g 100 -10.9 -4.18421 | TAATCAGAGAAACAA CTGAGAC AGA GTCTCAG AACTATGGTTACAAG PMT9312_1144 1058239 - 1059321 + | photosystem q(b) protein TERM 790 1059345 - 1059361 + T 100 -10.8 -6.25578 | opp_overlap 1059345 TTCTTAATTTTACAA GCCCCC TTTTT GGGGGC TTTTTTTTGTTTAAT TERM 791 1059361 - 1059345 - T 86 -10.8 -3.36492 | opp_overlap 1059345 TTCTTAATTTTACAA GCCCCC TTTTT GGGGGC TTTTTTTTGTTTAAT PMT9312_1145 1060221 - 1059433 - | hypothetical protein PMT9312_1146 1061224 - 1060448 - | hypothetical protein PMT9312_1147 1061812 - 1061228 - | hypothetical protein PMT9312_1148 1062337 - 1061828 - | hypothetical protein TERM 792 1062601 - 1062591 - H 72 -8.2 -3.41988 | opp_overlap 1062590 1062589 1062586 1062591, overlap 1062589 TCTCAGCGAAGAATA GGCC TTA GGCC ATATATCTTTGGCAC TERM 793 1062651 - 1062661 + H 72 -8.2 -3.40611 | overlap 1062648 CATGCCACGATTTAT GGCC TAA GGCC TATTCTTCGCCTACA PMT9312_1149 1062737 - 1065709 + | protein with signal peptide PMT9312_1150 1065706 - 1067346 + | hypothetical protein TERM 794 1067744 - 1067726 - g 73 -8.9 -2.91824 | overlap 1067725 GAACGAAAAATTAAT TCCCCAA CATTT TTGGGGA GAGGGGTTTCAAATA PMT9312_1151 1067348 - 1068796 + | retron-type reverse transcriptase PMT9312_1152 1068807 - 1069370 + | hypothetical protein PMT9312_1153 1069846 - 1069424 - | hypothetical protein PMT9312_1154 1071047 - 1069860 - | hypothetical protein PMT9312_1155 1072192 - 1071098 - | ATP-dependent DNA ligase TERM 795 1072263 - 1072248 - R 77 -4.8 -5.24799 | overlap 1072240 GTATAAATATAAAAA TTATAG AAAT CTATAA ATATCTATAAATGAA PMT9312_1156 1072819 - 1072307 - | hypothetical protein PMT9312_1157 1073474 - 1073052 - | hypothetical protein TERM 796 1073526 - 1073512 - H 72 -6.4 -4.20817 | TAGACCCTAAAACAA TTAGGC TAA GCCCAA ATCCGAAACCTAGTA PMT9312_1158 1073910 - 1074203 + | vanadium/alternative nitrogenase delta-like PMT9312_1159 1074511 - 1074696 + | hypothetical protein PMT9312_1160 1074708 - 1074896 + | virion host shutoff protein-like PMT9312_1161 1075463 - 1075209 - | cytochrome oxidase C subunit VIb-like TERM 797 1075605 - 1075592 - R 91 -2.3 -6.38039 | TAGGCAAAAAAAAAA GACCC TTGC GAGCC TAGGTGATGGGGACC PMT9312_1162 1076860 - 1076207 - | hypothetical protein PMT9312_1163 1077688 - 1077233 - | hypothetical protein TERM 798 1078030 - 1078020 - R 74 -6.8 -4.19953 | CAGCGAAGGTCAAAA CCCA CCT TGGG AAAAAATTGGGAAAA PMT9312_1164 1078721 - 1078089 - | sulfotransferase family protein PMT9312_1165 1079930 - 1079190 - | ATPase TERM 799 1079260 - 1079249 - G 73 -4.4 -5.09259 | CATTTGAAAAGAAAA CTTC TGGA GAAG AGATTTCTAAAATCT PMT9312_1166 1080972 - 1079941 - | amino acid ABC transporter permease PMT9312_1167 1081873 - 1080980 - | amino acid ABC transporter permease TERM 800 1081066 - 1081056 - G 71 -3.2 -5.2189 | TTAAGGATTAAAAAA CTGC AAA GCAA AATCATAAAGCACTC PMT9312_1168 1082942 - 1081893 - | extracellular solute-binding protein TERM 801 1081950 - 1081983 + g 77 -7.6 -4.09822 | AATTTCATTCAATCC TCTTGGAATAGGTA CATCGC TATCTATCCCAAGA TTTCTATCATAAATT TERM 802 1083975 - 1083988 + r 76 -6.7 -4.42639 | opp_overlap 1083975 TCACACAAAAAAAAA GACTC TAAT GAGTC TTTTAATTCAAATCT TERM 803 1083988 - 1083975 - R 100 -6.7 -6.30182 | opp_overlap 1083975 TCACACAAAAAAAAA GACTC TAAT GAGTC TTTTAATTCAAATCT PMT9312_1169 1085784 - 1084774 - | NADPH-dependent reductase TERM 804 1085104 - 1085122 + g 70 -8.2 -3.01712 | overlap 1085119 AATATTCATTGATTC TCCCAAAA ACC TTTTGGGG TGTTCAAAAACAGCC TERM 805 1085578 - 1085603 + g 80 -9.1 -3.63968 | TCTTTTTAAGCTTTC TGGTTCAAGGA GATC TCCTTGAACAA TTTCAACATTTGGCA TERM 806 1085870 - 1085847 - R 81 -5.4 -5.11112 | opp_overlap 1085846 AAATGTTAAGAAAAA TTACGTTTCT GTTA AGAAATGTAA AGTATTTTCTCCTCA PMT9312_1170 1086822 - 1086217 - | hypothetical protein TERM 807 1086407 - 1086425 + g 73 -7.6 -3.67564 | CTCTCAAGAGATTTC TTATCTTT GAA AAAGATAA TTTGGCTAAATGCTT TERM 808 1087014 - 1086990 - R 80 -7.9 -4.13767 | overlap 1087006 TTTTTTATTGGAAAA TCTGACGGC AGCAAGA GCCGTCAAA TTGCCGTCAAAACGT PMT9312_1171 1087716 - 1087039 - | hypothetical protein TERM 809 1088377 - 1088350 - R 85 -8.5 -4.40561 | gap 1, overlap 1088347 1088352 TTTTCTTAAAAATAA CG-CCCAGTGCT TTGGG AGCACTAGGTCG CAGGTTCAAATCCTG TERM 810 1088374 - 1088352 - R 78 -9.9 -2.53831 | overlap 1088350 1088347 TTCTTAAAAATAACG CCCAGTGCT TTGGG AGCACTAGG TCGCAGGTTCAAATC PMT9312_1172 1088785 - 1088522 - | hypothetical protein TERM 811 1089012 - 1088992 - R 73 -9.1 -2.80354 | overlap 1088991 1088994 TACATTCATTTAAAG GATTGGATA TGC TATCCAACC AAATAAGGTGTAATT PMT9312_1173 1089240 - 1088986 - | high light inducible protein-like PMT9312_1174 1090228 - 1090004 - | hypothetical protein PMT9312_1175 1090704 - 1090291 - | hypothetical protein TERM 812 1091341 - 1091326 - R 72 -3.4 -5.40072 | opp_overlap 1091307 1091326, overlap 1091301 TTTTTGTTAAAAAAA TATATT CTAA AATATA AATTTGTTCTAATGA TERM 813 1091354 - 1091373 + r 86 -3.6 -6.07627 | ATAAATTTGTTCTAA TGATTCAT TTTT AAGAATCA TTTTTTTTTGCAAAT PMT9312_1176 1091801 - 1091505 - | cytochrome b559 subunit beta PMT9312_1177 1092021 - 1092389 + | hypothetical protein PMT9312_1178 1093349 - 1093035 - | hypothetical protein TERM 814 1094255 - 1094276 + G 70 -7.4 -3.58343 | opp_overlap 1094255 1094254 GGGTGATTTAAAAAC TCTTGCTT TCTCTC AAGCAAGA TTTGCCACTGCTACA PMT9312_1179 1093815 - 1094933 + | adhesin-like protein PMT9312_1180 1094937 - 1095872 + | hypothetical protein TERM 815 1095910 - 1095934 + T 78 -7.3 -4.37886 | opp_overlap 1095902 1095900 GATGATATCCCCTAA TTTTTGATCGA CTA TCAATCAAAAA TTTTATGACACATAA PMT9312_1181 1097832 - 1096012 - | Outer membrane protein-like TERM 816 1096586 - 1096617 + g 74 -3.2 -5.40279 | TTTTTGAGAGAGGTT TTTAAAGTTTTGTA GCTT TCTGAAACTTTAAA TTTTATTTTATTTTC TERM 817 1098098 - 1098086 - g 84 -3.5 -5.80364 | opp_overlap 1098086 ATCCCAAGAAAAAAA TAAAT ATA ATTTA TTTAATGAAATAGTA TERM 818 1098601 - 1098637 + G 84 -11.1 -3.02144 | overlap 1098596 GTGCCTATATTTCGA GTAGCTCCAATATTGAA GGT TTAAATATTGGATCTAC TATTGAAGGGCCTAA TERM 819 1098886 - 1098926 + G 71 -7.8 -3.54935 | TTATAGAAGAGTCAT TGGCATGTCTAAGAAT GATAGTTAG ATTCTTCGATATGCCA TTTAAAAAAGATTTA TERM 820 1099152 - 1099141 - g 74 -3 -5.40072 | TCTGGTCTAAAAAAA GAAA TAAA TTTC TAAAAAGTGATCCTA PMT9312_1182 1098042 - 1100990 + | ATPase PMT9312_1183 1101022 - 1101975 + | leukotoxin secretion protein-like PMT9312_1184 1102314 - 1101985 - | hypothetical protein PMT9312_1185 1105097 - 1102422 - | subtilisin-like serine protease-like PMT9312_1186 1105215 - 1106063 + | leader peptidase (prepilin peptidase) / N-methyltransferase PMT9312_1187 1107432 - 1106092 - | Type II secretory pathway component PulF-like PMT9312_1188 1108514 - 1107438 - | twitching motility protein PMT9312_1189 1110295 - 1108511 - | Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB-like TERM 821 1109268 - 1109250 - G 74 -7.4 -4.05991 | overlap 1109253 AACATAGAGTATAAA GTAGTGGA TTT TCCACTTC CAGTTGGACCTACTA TERM 822 1110459 - 1110443 - H 71 -6.7 -3.9638 | overlap 1110436 TATCAATATAAAAGA TTTAACT TAA AGTTAAA ATGAAAAAATTTATT TERM 823 1110463 - 1110483 + G 82 -2.7 -5.98675 | CTTAAAGTTAAAATG AAAAAATTT ATT AAATTTTTA TTTTTTGTTTTTATA PMT9312_1190 1110460 - 1110933 + | hypothetical protein PMT9312_1191 1110930 - 1112528 + | hypothetical protein PMT9312_1192 1112519 - 1113217 + | hypothetical protein PMT9312_1193 1113214 - 1113975 + | hypothetical protein TERM 824 1114277 - 1114248 - g 100 -13.9 -4.13945 | opp_overlap 1114252 ATTTCTAGCCGAAAA TCAATATCAATCT AATA AGATTGATATTGA TGACTCCAAACCTAT TERM 825 1114252 - 1114273 + G 77 -8.9 -3.18264 | opp_overlap 1114248 CTAGCCGAAAATCAA TATCAATCT AATA AGATTGATA TTGATGACTCCAAAC PMT9312_1194 1114072 - 1115742 + | Type II secretory pathway component PulD-like PMT9312_1195 1117249 - 1115765 - | hypothetical protein PMT9312_1196 1117860 - 1117237 - | hypothetical protein PMT9312_1197 1118444 - 1117860 - | hypothetical protein PMT9312_1198 1120614 - 1118446 - | hypothetical protein PMT9312_1199 1121354 - 1120689 - | hypothetical protein PMT9312_1200 1121760 - 1121431 - | hypothetical protein PMT9312_1201 1122390 - 1121821 - | Tfp pilus assembly protein PilE-like TERM 826 1121853 - 1121870 + g 81 -9.9 -2.98789 | overlap 1121851 1121850 1121855 CATCATTGTTCTCTC CACATCC TGGT GGATGTG TAATCTTTTCTAAAT TERM 827 1121891 - 1121903 + g 79 -3.5 -5.64006 | TTTTCTAAATTATTA TTATT TTC AATAA TTTTTTTAATTCCAT TERM 828 1123917 - 1123896 - g 70 -4.5 -4.85618 | opp_overlap 1123887 1123896, overlap 1123887 1123891 AAAGAATCAATAAAA TTGAATTTG CCAC CAAAATCAA TTGTACTTGCAGCAT PMT9312_1202 1122591 - 1124489 + | TPR repeat-containing protein PMT9312_1203 1125274 - 1124555 - | hypothetical protein TERM 829 1124664 - 1124677 + g 76 -5.3 -5.09762 | opp_overlap 1124651 AATCTTCCTATGGGA GGAAT CAAC ATTCC TTTTTCTATTGAAAT PMT9312_1204 1126348 - 1125626 - | ribosomal large subunit pseudouridine synthase F PMT9312_1205 1126708 - 1127313 + | hypothetical protein PMT9312_1206 1127753 - 1127502 - | hypothetical protein TERM 830 1127873 - 1127885 + r 76 -6.3 -4.67982 | GATTTCACACTGTGA TGGAT TGT ATCCA TTTTATTGCATAAAC PMT9312_1207 1128953 - 1128315 - | hypothetical protein PMT9312_1208 1129750 - 1129914 + | hypothetical protein TERM 831 1130317 - 1130286 - T 80 -8 -4.1023 | overlap 1130283 AAGGTTAAACAAGAA GCCCCTCCAGAAAT TCCA ACTACTGAAAGGGC TATTAAATTGACTCG TERM 832 1130382 - 1130398 + T 78 -7.3 -4.55295 | CGTAGAGCGTACTCA TTGAGGT TTG GCCTCAA TTTATTTATAGCAAA TERM 833 1130649 - 1130634 - T 84 -6.1 -5.24129 | opp_overlap 1130634 TTTTCCCATAAAAAA GAGGG TTGTAT CCCTC TATGTTAGATCGAAT PMT9312_1209 1131000 - 1130689 - | hypothetical protein TERM 834 1131128 - 1131115 - H 95 -4.5 -6.44931 | AATAACAAAAAAAAA GACTC TTAC GAGCC TAGGTGATGGGGACT TERM 835 1131279 - 1131295 + H 100 -6.5 -5.60993 | opp_overlap 1131279 TTTTTTTTTTAATTA GGGCG AAGCTAA CGCCC TTTTTTTATGGAAAA PMT9312_1210 1131761 - 1131991 + | hypothetical protein PMT9312_1813 1132323 - 1132445 + | hypothetical protein PMT9312_1212 1132493 - 1133026 + | hypothetical protein TERM 836 1133072 - 1133082 + F 87 -2.6 -6.23317 | TTTGCTTAGAAATTT TAAA TTT TTTA TTTTTTTATTTTTCT PMT9312_1213 1133133 - 1133270 + | gibberellin regulated protein-like PMT9312_1214 1133271 - 1133534 + | fumarate reductase subunit D-like TERM 837 1133542 - 1133526 - T 70 -5.2 -4.56153 | overlap 1133523 CTATTACAAAAAGAA CTTAGA TAAAT TCTAAG TAAGGCCAAAACTCT PMT9312_1215 1133756 - 1133556 - | hypothetical protein PMT9312_1216 1134455 - 1134165 - | hypothetical protein TERM 838 1134721 - 1134736 + r 80 -4.7 -5.4505 | GACGGATCTTCTGTA TGGAG TAACTT CTCCA TTTTTTGTTGCCAAA TERM 839 1134761 - 1134785 + r 76 -3.6 -5.57729 | gap 1, overlap 1134757 1134755 1134766 GCCAAAATTTGGGCT TCATA-GAGCC TATT GGCTCTTTTGA TTTTTTCTCTTATTT TERM 840 1134766 - 1134779 + r 89 -8.1 -4.90477 | overlap 1134757 1134755 1134761 AATTTGGGCTTCATA GAGCC TATT GGCTC TTTTGATTTTTTCTC PMT9312_1217 1135280 - 1135005 - | hypothetical protein PMT9312_1218 1136178 - 1135963 - | hypothetical protein TERM 841 1136269 - 1136283 + r 75 -4.3 -5.1287 | opp_overlap 1136269 CGTGATGTTTCCAAA GGATT GTTAA AATCC TTTTTTAAGTGTACA TERM 842 1136678 - 1136663 - R 77 -7.6 -4.29106 | GGTTATACCAAGAAA CTTGGA GTGA TCCAAG TAAATAAAAGCAATT PMT9312_1219 1138220 - 1136916 - | Mn2+/Fe2+ transporter PMT9312_1220 1138955 - 1138599 - | hypothetical protein PMT9312_1221 1139338 - 1139039 - | hypothetical protein PMT9312_1222 1139690 - 1139355 - | hypothetical protein PMT9312_1223 1139766 - 1141115 + | SNF family Na(+)-dependent transporter TERM 843 1141154 - 1141119 - f 86 -9.4 -3.97368 | opp_overlap 1141117 1141119, overlap 1141120 TGGGTAAGTTAGAAA CTTTTTTTAGATTATT TTAA AACAATCTAAAAAAAA TCTTCAATGTATAAG TERM 844 1141153 - 1141120 - f 83 -10.7 -2.981 | opp_overlap 1141119 1141117, overlap 1141119 GGGTAAGTTAGAAAC TTTTTTTAGATTATT TTAA AACAATCTAAAAAAA ATCTTCAATGTATAA TERM 845 1141736 - 1141755 + G 71 -7.9 -3.45321 | AATTATCCAATGAGT CCTGTTG GTTGGG CAACAGG TTATGCATTATCAAT PMT9312_1224 1141418 - 1143121 + | hypothetical protein PMT9312_1225 1143589 - 1143167 - | hypothetical protein PMT9312_1226 1144059 - 1143877 - | hypothetical protein PMT9312_1227 1144209 - 1144478 + | phosphatidylinositol-specific-like PMT9312_1228 1144707 - 1144913 + | high light inducible protein-like PMT9312_1229 1144943 - 1145173 + | high light inducible protein-like PMT9312_1230 1145207 - 1145335 + | high light inducible protein-like PMT9312_1231 1145337 - 1145516 + | hypothetical protein TERM 846 1145542 - 1145571 + T 100 -8.7 -5.24129 | ATTAGATCGTCATGA GTGTTTGTCAATA GGGA TACTGACAAGCAC TTTTTTATGAGAAAA TERM 847 1145639 - 1145611 - T 100 -6.9 -7.07835 | opp_overlap 1145611 TAAAAAAAAAAAAAA GAGATTGTTTC TTAGCTG AAAACAATCTC TAGATTACCTAATTC PMT9312_1232 1146287 - 1146036 - | hypothetical protein TERM 848 1146185 - 1146199 + g 86 -5.8 -5.3798 | CGAATGATACTCTGA GAAAAA AAT TTTTTC TTTTTGTTCTTCTTA PMT9312_1233 1146640 - 1146341 - | cytochrome b/b6/PetD-like TERM 849 1146691 - 1146701 + r 71 -2.6 -5.53991 | GAAAATCAAGAACTT TTTA CAA TAAA TTTTTTTAGTAAGTA TERM 850 1147116 - 1147093 - R 93 -9 -4.78661 | ATTCAAAAAGCAAAA TAGTAAGCCT TAAG AGACTTACTA AACATTAAATAAGAA PMT9312_1234 1148205 - 1147114 - | translation-associated GTPase PMT9312_1235 1148350 - 1149411 + | secretion protein HlyD PMT9312_1236 1149408 - 1152338 + | DNA polymerase I TERM 851 1152912 - 1152894 - g 100 -6.8 -5.77677 | overlap 1152901 1152908 GAAAATAATAAAAAA CAAAATCC GCA AGATTTTG CACTATGGAAAAAAG PMT9312_1237 1152363 - 1153832 + | cysteinyl-tRNA synthetase TERM 852 1154992 - 1154978 - g 90 -5.8 -5.63517 | opp_overlap 1154971, overlap 1154971 TCCTTAAAGAAAAAA TTTCTT TTC AAGAAA TTCCAACATTTATAA PMT9312_1238 1153915 - 1155141 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase PMT9312_1239 1156047 - 1155913 - | high light inducible protein-like TERM 853 1155995 - 1156013 + g 72 -2.5 -5.32944 | gap 1 ATCGCAAATCTACCA TTG-AGCT TCTC AGCTACAA TTTTTTCCTTCTCAA TERM 854 1156355 - 1156343 - g 93 -6.3 -5.54907 | CCCACAAAACAAAAA TGCTT TAA AAGCA ATGAAGGTCAAAAAA PMT9312_1240 1156286 - 1156636 + | hypothetical protein PMT9312_1241 1157711 - 1156623 - | putative hydrolase of the alpha/beta-hydrolase fold PMT9312_1242 1159131 - 1157692 - | putative nicotinamide nucleotide transhydrogenase, subunit beta PMT9312_1243 1159433 - 1159140 - | putative nicotinamide nucleotide transhydrogenase, subunit alpha 2 (A2) TERM 855 1159290 - 1159306 + g 82 -9.5 -3.73534 | opp_overlap 1159289 1159288 1159293, overlap 1159293 TTTAACTATTAAAGT CAATGCT GCC AGCATTG TTATTCCTGAAATTG TERM 856 1159468 - 1159485 + r 70 -8.5 -2.56715 | TCAAAAACTTTATTT TGAAGGA CAAC TCCTTCA TCACTTAATAAACAT PMT9312_1244 1160621 - 1159446 - | putative nicotinamide nucleotide transhydrogenase, subunit alpha 1 (A1) TERM 857 1159566 - 1159530 - G 83 -10.5 -3.05463 | opp_overlap 1159529 1159528, overlap 1159535 ATCCTCTTTATCTAA TTTAATTACACCATC TTTTATG AATGGTGTAATTAAA GATGTTAAATTTTTA PMT9312_1245 1160702 - 1161280 + | EF-1 guanine nucleotide exchange domain-containing protein PMT9312_1246 1161435 - 1161659 + | hypothetical protein TERM 858 1161677 - 1161692 + F 74 -7.6 -3.98291 | opp_overlap 1161668 AATTAATCGATCTTG TGAAGG CCGA CCTTCA TTATTTGGGATTATT PMT9312_1247 1161740 - 1163116 + | thioredoxin reductase TERM 859 1163134 - 1163150 + T 70 -3.7 -5.15167 | overlap 1163137 TAGATGTTTACTTAT TATTCCT CTT AGGATTA TTTTTATTAGTCATA TERM 860 1163137 - 1163147 + T 70 -5.4 -4.66002 | overlap 1163134 ATGTTTACTTATTAT TCCT CTT AGGA TTATTTTTATTAGTC PMT9312_1248 1163392 - 1163126 - | translation initiation factor IF-1 PMT9312_1249 1163697 - 1163485 - | hypothetical protein PMT9312_1250 1164715 - 1163753 - | putative chaperon-like protein for quinone binding in photosystem II petM 1164871 - 1164773 - | cytochrome b6-f complex subunit PetM TERM 861 1165461 - 1165475 + G 83 -4.4 -5.58209 | TTATAGATAGATTCA TAAAAA TAT TTTTTA TTTTTTTACCTTTAG PMT9312_1252 1164965 - 1165915 + | putative alpha/beta hydrolase superfamily protein ilvH 1165912 - 1166436 + | acetolactate synthase 3 regulatory subunit PMT9312_1254 1167038 - 1166433 - | cyclophilin-type peptidyl-prolyl cis-trans isomerase PMT9312_1255 1167643 - 1167086 - | photosystem I assembly protein Ycf4 TERM 862 1167136 - 1167160 + g 73 -7.9 -3.76125 | TAGCCAGCCGAGCTC CTTCTTCTTCA ACT TGAAGAAGCGG TTTAAGTTCACCTGC TERM 863 1167171 - 1167193 + g 71 -3.2 -5.19261 | overlap 1167187 AGCGGTTTAAGTTCA CCTGCCCCAC TTA GAGGGAGAGG TTTTTTCCTACCTTT TERM 864 1167740 - 1167730 - H 70 -5.4 -4.58242 | AAAAAAGTCAGAAAA CCTT TAC AAGG CATTTCAGATATACA PMT9312_1256 1167825 - 1168901 + | photosystem II D2 protein (photosystem q(a) protein) PMT9312_1257 1168885 - 1170267 + | photosystem II PsbC protein (CP43) TERM 865 1170309 - 1170290 - T 100 -6.4 -6.02914 | opp_overlap 1170291, overlap 1170291 TTCATATAAAAAAAA GCCCTATC AAAA GATAGGGT TTTTTTTTTGTTATA TERM 866 1170308 - 1170291 - T 91 -9.9 -4.20122 | opp_overlap 1170291, overlap 1170290 TCATATAAAAAAAAG CCCTATC AAAA GATAGGG TTTTTTTTTTGTTAT TERM 867 1170291 - 1170308 + T 100 -9.9 -6.62203 | opp_overlap 1170290 1170291 TCATATAAAAAAAAG CCCTATC AAAA GATAGGG TTTTTTTTTTGTTAT PMT9312_1258 1170940 - 1170320 - | maf protein TERM 868 1172143 - 1172117 - g 74 -2.3 -5.55769 | TCTCAGAACAAAAAA TTAAAGGCATT GGATT ACTGCCATTAA GAACCACTTTCTTTG PMT9312_1259 1171009 - 1172538 + | cobyric acid synthase PMT9312_1260 1172535 - 1172786 + | hypothetical protein TERM 869 1173259 - 1173278 + T 95 -7.8 -5.09245 | opp_overlap 1173259 AAGTTAAAAAAAAAA GGCCCCTA TTTT TAGAGGCC TTTTTCTGGTTTTAC TERM 870 1173278 - 1173259 - T 100 -10 -6.40073 | opp_overlap 1173259 AAGTTAAAAAAAAAA GGCCCCTA TTTT TAGAGGCC TTTTTCTGGTTTTAC PMT9312_1261 1174932 - 1173901 - | putative iron ABC transporter, substrate binding protein PMT9312_1262 1175026 - 1175691 + | putative hydroxylase PMT9312_1263 1175764 - 1175991 + | M20/M25/M40 family peptidase-like TERM 871 1176022 - 1176036 + T 78 -7.1 -4.56093 | opp_overlap 1176022, overlap 1176017 ATAATCAAAAAAAAA CACCC TTAAT GGGTG TTTTCTAGTTCAATT TERM 872 1176036 - 1176022 - T 100 -7.1 -6.25242 | opp_overlap 1176017 1176022 ATAATCAAAAAAAAA CACCC TTAAT GGGTG TTTTCTAGTTCAATT PMT9312_1264 1177388 - 1176075 - | porin-like TERM 873 1177037 - 1177051 + g 72 -8.6 -3.0263 | opp_overlap 1177036 1177039, overlap 1177025 1177022 1177027 1177039 CTGTCTGAACCGAAT CAGATG GTT CATCTG TATTGAGACCATCCT glyQ 1178353 - 1177541 - | glycyl-tRNA synthetase subunit alpha PMT9312_1266 1178960 - 1178571 - | hypothetical protein PMT9312_1267 1179316 - 1178984 - | macrophage migration inhibitory factor family protein TERM 874 1179365 - 1179381 + H 76 -3.8 -5.52384 | opp_overlap 1179365, overlap 1179360 TTCTGTAGATTAAAA GTTTTA TTTTT TAAAAC TTTTTTTGATGAAAG TERM 875 1180213 - 1180195 - g 82 -6.2 -4.93547 | TTAATGAACCAAAAA TTATTAAA AAA TTTAATAA ACCGGTCATTAATAT PMT9312_1268 1179645 - 1180283 + | hypothetical protein TERM 876 1180579 - 1180607 + G 81 -9.1 -3.81027 | CCTTCAGAGCGAGAC TCCTTTATCAA AAACTAC TTGATAAAGGA TTTAGATTGGTTGAA PMT9312_1269 1180380 - 1180625 + | hypothetical protein PMT9312_1270 1181288 - 1180632 - | hypothetical protein TERM 877 1181327 - 1181346 + r 78 -4.3 -5.27923 | gap 1, opp_overlap 1181327 TTCTACAAAAAAAAA CCTC-CCT ACTAG AGGAGAGG TTTTTTATCAGATTG TERM 878 1181346 - 1181327 - R 95 -4.3 -6.22802 | gap 1, opp_overlap 1181327 TTCTACAAAAAAAAA CCTC-CCT ACTAG AGGAGAGG TTTTTTATCAGATTG PMT9312_1271 1182422 - 1181364 - | chlorophyll a/b binding light harvesting protein PcbD PMT9312_1272 1183092 - 1182568 - | flavodoxin FldA PMT9312_1273 1183235 - 1183969 + | hypothetical protein TERM 879 1184013 - 1184037 + G 79 -8.6 -3.93583 | CATATTTGGATATTT TGCAGCGGTT TTAAC AACAGCTGCA TTTCTACCTCAATTA PMT9312_1274 1183987 - 1184274 + | hypothetical protein PMT9312_1275 1184328 - 1184552 + | hypothetical protein TERM 880 1184820 - 1184831 + G 70 -4.4 -4.86773 | GCATTCTTAGCATTC TCCA TAAT TGGA TTTTTAATAGTTTTA PMT9312_1276 1184757 - 1185542 + | ABC transporter PMT9312_1277 1185630 - 1185881 + | CopG family protein PMT9312_1278 1187683 - 1185878 - | hypothetical protein TERM 881 1186879 - 1186865 - G 75 -2.8 -5.65927 | overlap 1186866 TATGTAAAGAAAAAA CCAGAA TGG TTCTGC ATGATTATTTACAAC TERM 882 1187648 - 1187658 + g 81 -3.2 -5.86332 | TAAAACTATCGATAA GGTT ATA AGCC TTTTTTTTGAGTTAA PMT9312_1279 1188775 - 1187699 - | glycosyl transferase group 1 PMT9312_1280 1189745 - 1188804 - | SMR family transporter PecM PMT9312_1281 1189798 - 1190607 + | signal peptide peptidase A PMT9312_1282 1190626 - 1190997 + | chorismate mutase TERM 883 1191097 - 1191081 - g 78 -2.3 -5.78622 | CTATGTTAAAAAAAA CAAAGAA GCT TCCTTTA AGTTTTAGAATTTTA PMT9312_1283 1191068 - 1191649 + | hypothetical protein rpmH 1191680 - 1191817 + | 50S ribosomal protein L34 PMT9312_1285 1191830 - 1192216 + | ribonuclease P protein component PMT9312_1286 1192213 - 1192626 + | hypothetical protein PMT9312_1287 1192699 - 1193841 + | putative inner membrane protein translocase component YidC PMT9312_1288 1193857 - 1195323 + | ATPase PMT9312_1289 1195448 - 1196725 + | seryl-tRNA synthetase TERM 884 1197128 - 1197143 + G 72 -9 -2.71119 | opp_overlap 1197130, overlap 1197127 1197130 CTAGTATTAGCTACA CAGCCT GAGA AGGCTG CTTCTATAGCTGGCT TERM 885 1197404 - 1197390 - g 95 -5.8 -5.77856 | opp_overlap 1197390 1197388 AAGAAACTAAAAAAA CAAAAA ACG TTTTTG TACTTTTTAAATATG PMT9312_1290 1196735 - 1197814 + | hypothetical protein rpsN 1197875 - 1198177 + | 30S ribosomal protein S14 TERM 886 1198202 - 1198219 + F 71 -5.7 -4.43477 | TTTACTTAAATATTG TTTTTTC TTCA GAAAAAA TTTTAATTAAATAAA TERM 887 1198598 - 1198586 - g 73 -9.1 -2.82516 | opp_overlap 1198590 GGTTTTATGAGGAGA GAGGG TCG CCCTC CAGAAAGAGCGACTT PMT9312_1292 1198352 - 1200517 + | polynucleotide phosphorylase/polyadenylase PMT9312_1293 1201418 - 1200522 - | CysQ protein-like PMT9312_1294 1201422 - 1202285 + | hypothetical protein TERM 888 1202342 - 1202328 - g 85 -2.9 -5.90981 | opp_overlap 1202328 TTATATTAAAAAAAA TAGTT TTTGC AACTA CTTTCAATTCTTGTT PMT9312_1295 1202306 - 1202527 + | hypothetical protein PMT9312_1296 1203215 - 1202532 - | hypothetical protein TERM 889 1203818 - 1203835 + G 78 -5.7 -4.77567 | AAAAAAAAATTATCT GAATATT GGTA AATATTC TTTTCTTATAGGAGT TERM 890 1204383 - 1204373 - g 72 -2.6 -5.38054 | CCTCATAAAGAAAAA TATA AAA TATA AAATTAAAAGTCTTT PMT9312_1297 1203744 - 1205078 + | hypothetical protein TERM 891 1205452 - 1205442 - g 86 -4 -5.82172 | ACGAATATAAAAAAA CATT AGT AATG AATGGTGCCTCCTTA TERM 892 1205645 - 1205624 - g 72 -8.7 -3.17146 | opp_overlap 1205623, overlap 1205622 TTTGGTGATAACATA CCTCTTCCT TTAG AGGGAGAGG CTTCATGGACATGTC PMT9312_1298 1205096 - 1205719 + | putative acetyltransferase PMT9312_1299 1205763 - 1207088 + | UDP-glucose 6-dehydrogenase PMT9312_1300 1207101 - 1208192 + | WblB protein TERM 893 1209327 - 1209293 - g 70 -4.4 -4.82901 | opp_overlap 1209300, overlap 1209300 TTTTTGCGATAAAAA TTCTAAATGGGAAGAT CAA ATCTTCTCATGTATAA ATGATCCTATTAAAA TERM 894 1209300 - 1209320 + G 73 -9.1 -2.92642 | opp_overlap 1209300 1209293 GATAAAAATTCTAAA TGGGAAGAT CAA ATCTTCTCA TGTATAAATGATCCT PMT9312_1301 1208196 - 1209452 + | glycosyltransferase-like protein TERM 895 1209969 - 1209982 + G 75 -8.1 -3.69094 | overlap 1209937 GGAACAGTTCCTCTT GCCGT TGGA ACGGC TTTAGCTAGTAAGTT TERM 896 1210101 - 1210124 + G 74 -7.6 -3.81 | ATTAATAATTGTCCC GTTATTTTTG TAGT CGAAAATAAC TTATTCTCAAGTCAT PMT9312_1302 1209543 - 1210586 + | pyruvate dehydrogenase (lipoamide) PMT9312_1303 1210583 - 1211572 + | pyruvate dehydrogenase (lipoamide) PMT9312_1304 1211581 - 1212684 + | pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis PMT9312_1305 1212681 - 1213412 + | sugar transferase involved in lipopolysaccharide synthesis-like TERM 897 1214793 - 1214780 - g 91 -2.4 -6.60239 | AAAAAGAAAAAAAAA CATG CTTCTC CATG GTTAGATTTGGAAAT PMT9312_1306 1213420 - 1215327 + | nucleotide-diphosphate-sugar epimerase, membrane associated PMT9312_1307 1216392 - 1215319 - | glycosyltransferase-like protein TERM 898 1215587 - 1215564 - G 71 -9 -2.59431 | gap 1, opp_overlap 1215564, overlap 1215560 TTTTTTGACAAGCCA TAGCTTC-AGC TAT GCTTGAAGCTA TCCCAGCATCAGATA TERM 899 1216432 - 1216448 + r 78 -6.7 -4.57304 | overlap 1216443 ATTAGCCAATATTCT CTTTAAA TAT TTTAAAG TTTCTTTGATTGGCT PMT9312_1308 1217737 - 1216418 - | hypothetical protein TERM 900 1217301 - 1217274 - G 80 -7.2 -4.67038 | TTTGCAAAACTAAAA TTCTTTATACTT CTAT ATGTATAAAGAA CAAATTCTAATAATA PMT9312_1309 1217848 - 1218498 + | hypothetical protein PMT9312_1310 1218554 - 1219945 + | hypothetical protein PMT9312_1311 1220026 - 1221573 + | dolichyl-phosphate-mannose-protein mannosyltransferase PMT9312_1312 1221700 - 1223124 + | UDP-glucose 6-dehydrogenase PMT9312_1313 1224648 - 1223581 - | putative nucleotide sugar epimerase TERM 901 1224742 - 1224714 - R 83 -4.9 -5.62288 | opp_overlap 1224714 1224715, overlap 1224708 1224728 TTAATAAAATAAAAA TTTTTTTTAAA AAATTAA TTTAAAAAAAA TTAAAAATATTTATC TERM 902 1224775 - 1224743 - R 82 -3 -5.86332 | overlap 1224728 TTAATTTAAAAAAAA TTAAAAATATTTAT CTTCC ATAATTATCTTTAA ATCTATAAATATCAT PMT9312_1314 1226183 - 1224753 - | mannose-1-phosphate guanylyltransferase (GDP) TERM 903 1225859 - 1225847 - G 75 -4.9 -5.10033 | opp_overlap 1225847 CTAAGACAAACAAAA TTGAA TCT TTCAA ATCATTTTTTGATCT PMT9312_1315 1227339 - 1226341 - | NAD dependent epimerase/dehydratase TERM 904 1226675 - 1226661 - G 74 -4.2 -5.18726 | TTTTCAGAACAAAAA CAACCG CTT CGGCTA AGTCATCAACATGTA PMT9312_1316 1228511 - 1227408 - | GDP-mannose 4,6-dehydratase TERM 905 1228537 - 1228566 + r 70 -5.1 -4.61916 | TGATTAGGTATATTT GTTTACCTTTGCA TAAA TCCAAAGATAAAC TTATTTATTTTTTAT PMT9312_1317 1229771 - 1228713 - | UDP-galactose 4-epimerase TERM 906 1229429 - 1229451 + g 77 -9.3 -3.24 | opp_overlap 1229439 TTCCTAAGAGGTTTG TTTCCCAAT ATTCC ATTGGGAAA TTAATAGATTCATTT TERM 907 1231087 - 1231068 - g 85 -5.1 -5.56264 | TGTAAAGATAAAAAA TCCAAAA CAAAAC TTTTGGA AAATTTAAAACAAAT PMT9312_1318 1230042 - 1231412 + | hypothetical protein PMT9312_1319 1232370 - 1231381 - | putative UDP-N-acetylglucosamine-1-phosphate transferase TERM 908 1232249 - 1232211 - G 72 -2.4 -5.34857 | opp_overlap 1232213 1232215 1232218, overlap 1232213 1232218 TTAAAGAAAAGAAAA TACCTAATCCTCCTATCC TAG GTATAGGAGAATAATGTT TCTTTCTATAATTAG PMT9312_1320 1233536 - 1232373 - | glycosyltransferase-like protein TERM 909 1233202 - 1233175 - G 93 -10.2 -4.62471 | AATCTATATACAAAA TTTCTTTTATTT TTAT AAATAAAAGAAA AGAAAAACAAGGCAA PMT9312_1321 1233668 - 1234411 + | hypothetical protein TERM 910 1235156 - 1235190 + G 82 -11 -2.58427 | opp_overlap 1235163 1235166, overlap 1235155 1235158 1235166 CTATAAGTTTTTATA GATTGAAGAAGAAAAA TAT TTTTTCTTCGTTAATC ATTCTGACAACTATT TERM 911 1235183 - 1235163 - g 81 -9.9 -3.15999 | opp_overlap 1235158 1235156 1235155 1235166, overlap 1235166 TTTTTATAGATTGAA GAAGAAAAA TAT TTTTTCTTC GTTAATCATTCTGAC PMT9312_1322 1234411 - 1235592 + | hypothetical protein PMT9312_1323 1235653 - 1236765 + | glycosyltransferase TERM 912 1236853 - 1236831 - g 71 -7.8 -3.47387 | overlap 1236822 1236824 TCAAAATATTCACAA TATGAATGAG ACT CTCATGCATA GAGGGCCTGATCACA TERM 913 1237191 - 1237181 - g 95 -4 -6.22802 | CTTTAGAAAAAAAAA TACA TCT TGTA AGAGATAGATTTGGT TERM 914 1238387 - 1238377 - g 75 -2.6 -5.58454 | TTCATATTAAAAAAA TTAT TGA ATAA ATATCTTCCCAAAAA PMT9312_1324 1236769 - 1238637 + | asparagine synthase (glutamine-hydrolysing) PMT9312_1325 1238771 - 1240066 + | hypothetical protein TERM 915 1240712 - 1240693 - g 73 -8 -3.53012 | overlap 1240696 TTGCGCCTTTTCAAA TAACTCTA TTCA TAGAGTTA ACCCTATTATCAAAG TERM 916 1240988 - 1240961 - g 76 -8.8 -3.39117 | opp_overlap 1240967, overlap 1240959 1240957 1240967 ATTAAAGGAAATATA TTTAAATATTTT TTTA AAAATATTTAAA GAATAAGATTTTAAA PMT9312_1326 1240067 - 1240987 + | hypothetical protein TERM 917 1241503 - 1241513 + G 70 -4 -5.01497 | TAATTTTTAAAGATT TTGA TAA TCAA TTTTTCTATGCTGCT PMT9312_1327 1241058 - 1242014 + | hypothetical protein PMT9312_1328 1243601 - 1242021 - | hypothetical protein TERM 918 1242960 - 1242983 + g 77 -7.5 -4.04394 | ATCAAGATTACCTGT GTCATACCA ATCAAA TGGTATGGC TTTGATTAATTTACC PMT9312_1814 1243965 - 1243633 - | hypothetical protein PMT9312_1329 1244072 - 1244410 + | mannose-6-phosphate isomerase TERM 919 1244758 - 1244725 - g 100 -14.9 -3.20382 | overlap 1244727 GTTTAGATTCAGCAA TATATGATGTCAAAG AAAA CTTTGACATCATACA TATAGATCCATGGAA TERM 920 1244756 - 1244727 - g 100 -15.3 -3.16492 | overlap 1244725 TTAGATTCAGCAATA TATGATGTCAAAG AAAA CTTTGACATCATA CATATAGATCCATGG TERM 921 1245413 - 1245395 - g 78 -6.8 -4.39002 | CATTAAGAAAAAATA TCCTGAAT TGG ATTCAAGA ATTAAACTATCTATC PMT9312_1330 1244466 - 1245467 + | hypothetical protein PMT9312_1331 1245452 - 1245835 + | hypothetical protein PMT9312_1332 1247552 - 1245822 - | ATPase TERM 922 1245900 - 1245878 - G 71 -8.6 -2.80195 | opp_overlap 1245878, overlap 1245875 ATCGATGAGCAATCA TGATAACTGT TAA ACAATTATCA TTAGATTGGATATTT TERM 923 1246748 - 1246738 - G 77 -3.2 -5.62288 | TCAATAAAATAAAAA GGCA GCC TACC AAGTAAATCAATTTC PMT9312_1333 1248708 - 1247830 - | hypothetical protein PMT9312_1334 1249710 - 1248757 - | UDP-glucose 4-epimerase TERM 924 1249353 - 1249373 + g 91 -7.7 -5.26119 | ATACTGTTGCACTAC TAGAAAAGG CCA CCTTTTTTA TTTTATTTTTCGAGG PMT9312_1335 1251016 - 1249763 - | histidinol-phosphate phosphatase TERM 925 1250472 - 1250446 - G 73 -8.2 -3.42013 | overlap 1250449 ATTTTATAAGATCAA GAATTTCTGTAT TAA ATAAAGAAATTC CGGCATTACCTAAAA PMT9312_1336 1251989 - 1251006 - | hypothetical protein PMT9312_1337 1252606 - 1251986 - | phosphoheptose isomerase PMT9312_1338 1253013 - 1252609 - | hypothetical protein TERM 926 1254676 - 1254654 - g 77 -2.9 -5.64421 | ATTTTAAATAAAAAA TTAACTAAT GAAAT ATTAATTAA ATATATGCTTAAAAA TERM 927 1254715 - 1254695 - g 84 -3.3 -5.76949 | overlap 1254698 TATGCTTAAAAAAAA GATTCCATA TAG TATAGATTC AAATAACAATATTTA PMT9312_1339 1253523 - 1254740 + | hypothetical protein TERM 928 1255969 - 1255983 + G 70 -6.4 -4.1891 | opp_overlap 1255971, overlap 1255965 1255971 TTTCCTCCTTGGCAA TAGCTC TTG GAGCTG TTTCTATTGAGAGGC PMT9312_1340 1255290 - 1256855 + | N-acetylneuraminate synthase TERM 929 1257732 - 1257709 - g 72 -3.3 -5.14819 | gap 1, overlap 1257710 AAATTAAAAAATAAA GGATTTGTAA TTATT TTACAAA-CC GCAAGAGGTACTAAA PMT9312_1341 1256857 - 1257900 + | CMP-N-acetylneuraminic acid synthetase-like TERM 930 1258239 - 1258223 - f 82 -10.9 -2.62616 | TCAGCTGGTAGAGCA CCTGCAT GGC ATGCAGG GGGTCAGCGGTTCGA TERM 931 1258665 - 1258696 + G 71 -8.2 -3.31792 | opp_overlap 1258670, overlap 1258669 1258670 GGTATGGGAATGACA TTAAATCCATATGA AGAT TCATATGGAATTGA TTATGGGGATCATGA TERM 932 1258691 - 1258670 - g 89 -10.3 -3.889 | opp_overlap 1258670 1258669 1258665 GGGAATGACATTAAA TCCATATGA AGAT TCATATGGA ATTGATTATGGGGAT TERM 933 1258670 - 1258691 + G 80 -10.3 -2.66452 | opp_overlap 1258670, overlap 1258669 1258665 GGGAATGACATTAAA TCCATATGA AGAT TCATATGGA ATTGATTATGGGGAT PMT9312_1342 1258440 - 1258952 + | hypothetical protein PMT9312_1343 1259444 - 1260169 + | hypothetical protein PMT9312_1344 1260929 - 1260189 - | hypothetical protein PMT9312_1345 1261049 - 1262092 + | hypothetical protein TERM 934 1262766 - 1262755 - g 70 -4.4 -4.75309 | TTAAATTCAATAAAA TAGC CTCT GCTA TGGCTACAAACTTAG PMT9312_1346 1262379 - 1263248 + | N-acetylneuraminate synthase PMT9312_1347 1263248 - 1264156 + | phosphoheptose isomerase PMT9312_1348 1264149 - 1264964 + | hypothetical protein PMT9312_1349 1264961 - 1265644 + | putative acylneuraminate cytidylyltransferase PMT9312_1350 1265645 - 1266403 + | 2-deoxy-D-gluconate 3-dehydrogenase TERM 935 1266722 - 1266748 + G 74 -5.2 -4.8667 | opp_overlap 1266720 1266723, overlap 1266723 TGTGGCAAGTTAACT ATTTTGCCAACA GAT TATTGGCAAAAA TTTTTGTAGAGTCTA TERM 936 1266747 - 1266723 - g 82 -10.9 -2.78712 | opp_overlap 1266722 1266723, overlap 1266720 GTGGCAAGTTAACTA TTTTGCCAACA GAT TATTGGCAAAA ATTTTTGTAGAGTCT TERM 937 1266723 - 1266747 + G 76 -8.7 -3.51279 | opp_overlap 1266723 1266720, overlap 1266722 GTGGCAAGTTAACTA TTTTGCCAACA GAT TATTGGCAAAA ATTTTTGTAGAGTCT TERM 938 1266790 - 1266773 - g 86 -7.1 -4.80882 | opp_overlap 1266783 AGTCTACACGAAAAA TTTTTGG AGAT CCAAAAA ATTCGGATTACTTTA PMT9312_1351 1266400 - 1267161 + | dehydrogenase with different specificities PMT9312_1352 1267165 - 1267980 + | putative oxidoreductase TERM 939 1268141 - 1268123 - gf 71 -5.4 -4.65494 | opp_overlap 1268123 AAATCACACACAAAA TATCTTCT TGA AGAAAATA ATATTTTTGATAACA PMT9312_1353 1267937 - 1269496 + | hypothetical protein TERM 940 1271101 - 1271088 - g 70 -3.8 -5.00616 | overlap 1271097 GTTTTTGGTAAAAAA GCAG GAAAGT CTGC CTCAGAATATTCATC PMT9312_1354 1269888 - 1271636 + | succinate dehydrogenase PMT9312_1355 1271749 - 1273425 + | hypothetical protein TERM 941 1273610 - 1273592 - T 86 -4.6 -5.6473 | opp_overlap 1273594 1273602 1273608, overlap 1273594 AGAATATTAAAAAAA GACCTAAT TTT ATTAGGTT CTAGGAGCTAGAAAT TERM 942 1273608 - 1273594 - T 78 -7.2 -4.44318 | opp_overlap 1273594 1273602, overlap 1273592 AATATTAAAAAAAGA CCTAAT TTT ATTAGG TTCTAGGAGCTAGAA PMT9312_1356 1274671 - 1274054 - | SOS function regulatory protein, LexA repressor PMT9312_1357 1275657 - 1274731 - | ornithine carbamoyltransferase PMT9312_1358 1277548 - 1275686 - | cell division protein FtsH3 TERM 943 1275746 - 1275756 + g 74 -4 -5.27923 | opp_overlap 1275743, overlap 1275744 ACCCTCAATAACTTC TTCT TCA AGAA TTTTTTGTGAAATTG PMT9312_1359 1278758 - 1277664 - | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 944 1277958 - 1277974 + g 76 -9.5 -3.13899 | opp_overlap 1277948, overlap 1277957 1277946 TGATACCTTTTCAAC TTCCACA CAT TGTGGAA TGTTGGTAAGAAATT PMT9312_1360 1279217 - 1278774 - | hypothetical protein PMT9312_1361 1279542 - 1279249 - | hypothetical protein PMT9312_1362 1279584 - 1280858 + | putative precorrin-6y methylase ppnK 1281780 - 1280872 - | inorganic polyphosphate/ATP-NAD kinase TERM 945 1281689 - 1281702 + g 71 -5.3 -4.72272 | opp_overlap 1281689 CTTATGACCTCATAA TTGGA TTTT TCCAA TTTTTCCTGAACAGA PMT9312_1364 1282888 - 1281851 - | phenylalanyl-tRNA synthetase alpha chain PMT9312_1365 1282928 - 1283737 + | survival protein SurE PMT9312_1366 1284250 - 1283717 - | hypothetical protein TERM 946 1284550 - 1284575 + GH 74 -7 -4.25283 | gap 1 ATTCTTGAAGATCTC GGGATT-GAAC AATTA GTTCTAATCCC TTTTGATAAGAAACT PMT9312_1367 1284319 - 1285242 + | putative riboflavin kinase/FAD synthase PMT9312_1368 1285208 - 1286305 + | thiamine-phosphate pyrophosphorylase PMT9312_1369 1286295 - 1286504 + | thiamine biosynthesis protein ThiS PMT9312_1370 1286617 - 1286784 + | hypothetical protein PMT9312_1371 1286852 - 1286983 + | hypothetical protein TERM 947 1286991 - 1286980 - T 75 -3 -5.59564 | opp_overlap 1286984, overlap 1286984 AGAAATCGAAAAAAA GTAA GTAT TTAC GAAATACTTTTAATA PMT9312_1372 1287644 - 1286988 - | putative circadian phase modifier CpmA PMT9312_1373 1288087 - 1287641 - | hypothetical protein PMT9312_1374 1288587 - 1288084 - | MECDP-synthase PMT9312_1375 1290003 - 1288756 - | polysaccharide export-related periplasmic protein PMT9312_1376 1290865 - 1290128 - | tRNA (Guanine37-N(1)-) methyltransferase TERM 948 1290891 - 1290904 + r 74 -5.3 -4.89054 | opp_overlap 1290891 TCCTCATAACCAAAC TCAAG TAGC CTTGA TTCTTTTTTTCTCCA era 1291777 - 1290866 - | GTP-binding protein Era PMT9312_1378 1291816 - 1292343 + | hypothetical protein TERM 949 1292348 - 1292367 + T 82 -7.9 -4.20932 | opp_overlap 1292348 TTGCCCAATAAAAAA GCGTAGA AAATAA TCTACGC TTTTAGATAAATATT TERM 950 1292367 - 1292348 - T 100 -7.9 -5.4505 | opp_overlap 1292348 TTGCCCAATAAAAAA GCGTAGA AAATAA TCTACGC TTTTAGATAAATATT PMT9312_1379 1293132 - 1292395 - | integral membrane protein, interacts with FtsH TERM 951 1292862 - 1292880 + g 76 -9.6 -3.01779 | opp_overlap 1292854 1292868, overlap 1292861 1292859 AACTAAAGCCTGTAA GTAAAGGC AAG GCCTTTGC GTTATTTGCATTATT PMT9312_1380 1294161 - 1293205 - | phoH-like phosphate starvation-inducible protein TERM 952 1293657 - 1293668 + g 81 -3 -5.72118 | CTTCTACGGCTGGTC TTGT TAAA ACAA TTTTTTCTATTTTTT TERM 953 1293915 - 1293899 - G 79 -8.1 -3.98913 | CCCATATTTAAAGAA CTTAAAG CGG CTTTAAG ATCTACCTCTGGGAC TERM 954 1294108 - 1294096 - G 71 -7.7 -3.49475 | overlap 1294079 TCCAGGCCCAGATAA TGCTG TAG CAGCA TCAGAGCTTGGCAAA rpsP 1294563 - 1294198 - | 30S ribosomal protein S16 PMT9312_1382 1296087 - 1294618 - | signal recognition particle protein TERM 955 1294911 - 1294929 + g 79 -8.2 -3.96327 | TTGAAGGTTGAGCAG CAAGAACC TCA GGTTTTTG TTTCTCCTCAAGAGT PMT9312_1383 1298240 - 1296135 - | hypothetical protein TERM 956 1298719 - 1298705 - g 76 -8.6 -3.53761 | GAACTTTTTGGTAAA GCTACA GGT TGTAGC AAAGGCCGAGGGGGG TERM 957 1298945 - 1298963 + G 71 -3.2 -5.29445 | TTAAATATGGCCCAA TTATGG AAATTAC CCATAA TTTTTGTTGTTGAGA TERM 958 1299376 - 1299364 - g 76 -6.3 -4.67353 | TGAGTCAGTTAAAAA TGCTT TAG AAGCA CCTGAACCTCCTTCA PMT9312_1384 1298354 - 1299427 + | pyruvate dehydrogenase E1 alpha subunit PMT9312_1385 1300370 - 1299429 - | type II alternative sigma-70 family RNA polymerase sigma factor PMT9312_1386 1302077 - 1300512 - | hypothetical protein TERM 959 1301012 - 1301030 + g 90 -9 -4.60487 | opp_overlap 1301011 1301012 ATAATCCTTCAAAAC TCAAAAGA TAG TCTTTTGA TTTTTCCCAATCATC TERM 960 1301030 - 1301012 - G 74 -9 -3.06837 | opp_overlap 1301012, overlap 1301011 ATAATCCTTCAAAAC TCAAAAGA TAG TCTTTTGA TTTTTCCCAATCATC TERM 961 1302170 - 1302151 - g 71 -2.2 -5.4588 | CAAAAGGATAAAAAA TTAGAGAA CAAT TTTTCTAA TAATAATAAAACTAA trmU 1302124 - 1303281 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 962 1303270 - 1303293 + T 73 -7 -4.08394 | opp_overlap 1303274 1303278 TTATTAGGTGGTGGA TTAATTAATT AATT AATTAATTAA TTTTCCAAAAGATAT PMT9312_1388 1304773 - 1303286 - | putative apolipoprotein n-acyltransferase TERM 963 1304077 - 1304091 + g 83 -5.8 -5.16151 | GCCAAATAGCCACAG GAAATT CAG AATTTC TTTTTATTGGATTTG PMT9312_1389 1304860 - 1305432 + | FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) TERM 964 1305620 - 1305631 + G 72 -5.8 -4.42386 | overlap 1305618 CATCTACGAGAGTTG CTGC TGAA GCAG TTTTATCAATGACAA TERM 965 1305658 - 1305680 + G 72 -9.2 -2.71144 | opp_overlap 1305656 ACAAAAAAACTTATT GCACTAGAAG TTC CTTCTAGTAC TGATTCAGCAGAATG PMT9312_1390 1305511 - 1305984 + | putative nickel-containing superoxide dismutase precursor (NISOD) TERM 966 1305997 - 1306012 + F 80 -4.8 -5.43329 | TAATCAGAATTATTT TCAAAA GTTT TTTTGA TTTTATTTTATTTTT TERM 967 1306356 - 1306340 - g 74 -3.1 -5.37593 | overlap 1306333 TCCTAAACTAAAAAA TTTTTTA ATT CAAAAAA ACAGAAGCACTTCTT PMT9312_1391 1306068 - 1306385 + | hypothetical protein PMT9312_1392 1307015 - 1306344 - | hypothetical protein TERM 968 1306689 - 1306720 + g 83 -11 -2.84098 | overlap 1306681 1306675 1306687 GTGACGATGGGCAAT TCCATTCTCATGCT TATG GGAATGAGAATGGA TACTTAATTGAAAAG trpC 1307958 - 1307071 - | indole-3-glycerol-phosphate synthase PMT9312_1394 1309410 - 1307971 - | dihydrolipoamide dehydrogenase TERM 969 1309131 - 1309145 + g 73 -4.3 -4.93696 | TTAAAACTAAATTAT TTGCA TGATC TGCAA TTTTTGATCTTTCAA PMT9312_1395 1310131 - 1309418 - | tRNA/rRNA methyltransferase (SpoU) TERM 970 1310671 - 1310655 - g 73 -8.1 -3.46709 | opp_overlap 1310655 1310654 AGAAAATGGGAAATA TCCTAAA AAA TTTAGGA GTTAATTTAATTGAT PMT9312_1396 1310453 - 1311823 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 971 1312777 - 1312763 - g 71 -2.1 -5.33921 | AAATTAATTAAAAAA TATGG GAACA CCACA AATAAAGGTAAAGAA PMT9312_1397 1312373 - 1313626 + | acetylornithine aminotransferase TERM 972 1314684 - 1314672 - g 73 -7.7 -3.57144 | TGTTCCAGTTCCAAA CCAAC CTA GTTGG CAATTAAAAGAACTT TERM 973 1314802 - 1314815 + G 74 -6.7 -4.28925 | TGGCCCCTTAATCTT CCTGT TTTA ACAGG TTCTATTTTTTTAGT PMT9312_1398 1313638 - 1314870 + | FolC bifunctional protein PMT9312_1399 1316222 - 1314867 - | FAD/FMN-containing dehydrogenase TERM 974 1315892 - 1315882 - G 78 -6.8 -4.38712 | TGTACTTTCACAAAA CCTG TCT CAGG ATCAAATTCTTCTAA PMT9312_1400 1317496 - 1316261 - | putative cytosine deaminase TERM 975 1317858 - 1317842 - g 75 -9.5 -2.83822 | overlap 1317844 GTTATTGGATAACCA CATTTGG ATG CCAAATG AACAAGGCCGATTCT PMT9312_1401 1317769 - 1319160 + | 2-methylthioadenine synthetase PMT9312_1402 1319174 - 1320241 + | D-alanine--D-alanine ligase TERM 976 1320473 - 1320459 - g 88 -7.2 -5.11112 | opp_overlap 1320471 1320472, overlap 1320472 AAATTTGAAGAAAAA GATTGT TTC ACAATC AAGAAACTTGAATTA PMT9312_1403 1320252 - 1320662 + | hypothetical protein PMT9312_1404 1320659 - 1321387 + | cell division protein FtsQ PMT9312_1405 1321567 - 1322682 + | cell division protein FtsZ PMT9312_1406 1322839 - 1323612 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase PMT9312_1407 1324094 - 1323717 - | hypothetical protein PMT9312_1408 1325629 - 1324406 - | putative oxygen-independent coproporphyrinogen III oxidase TERM 977 1326033 - 1326046 + G 79 -2.4 -5.75342 | opp_overlap 1326029, overlap 1326029 AATACTATTAATTCC CTTC CCAAGA GAAG TTTTTTTTGCAAAAC PMT9312_1409 1325728 - 1326837 + | PIN domain superfamily protein PMT9312_1410 1326878 - 1327540 + | ATP-dependent Clp protease-like protein clpP 1327567 - 1328178 + | ATP-dependent Clp protease proteolytic subunit TERM 978 1329207 - 1329186 - g 70 -3.8 -4.96501 | TGCGATAAAAATAAA CCCTTAAT GACAAA ATTAAGAG AAGAGAACTCAAAAC PMT9312_1412 1328289 - 1329278 + | ketol-acid reductoisomerase TERM 979 1329807 - 1329817 + G 74 -4 -5.24129 | TTGGAATTATTTTTA TGAA GTT TTCA TTTTTTCTACCAGGG PMT9312_1413 1329266 - 1330285 + | adenosylcobinamide-phosphate synthase TERM 980 1330366 - 1330348 - g 80 -6 -5.10461 | TCTATGCAAGAAAAA GACTCTCC AAT GGAAAATC AAAATGATGATTTTA TERM 981 1330395 - 1330371 - g 74 -5.9 -4.69549 | AATGGAAAATCAAAA TGATGATTT TACTAAT AAATCATCA ACTGATAATGAATAT PMT9312_1414 1330336 - 1330581 + | high light inducible protein-like PMT9312_1415 1330584 - 1330796 + | hypothetical protein PMT9312_1416 1331048 - 1330791 - | hypothetical protein PMT9312_1417 1331352 - 1331107 - | beta-lactamase-like TERM 982 1331270 - 1331289 + g 74 -2.2 -5.54264 | overlap 1331260 TTGTCTTTAATAAAA GAAGGTAA GAAT TTATTTTC TTTTTTTACATCTTT PMT9312_1418 1331718 - 1331407 - | hypothetical protein TERM 983 1331824 - 1331806 - R 95 -4.5 -6.47228 | CAATTAAAAAAAAAA GATGCCC AAAAA GAGCACC TTAGTATTTCAGGAA PMT9312_1419 1332134 - 1331859 - | histone-like DNA-binding protein TERM 984 1331915 - 1331929 + g 75 -5 -5.08169 | overlap 1331888 ATGTAGGAACTCTTT TAGCAG GTA TTGCTA TTTTTTCGCCTGTCT TERM 985 1332382 - 1332353 - H 73 -8.7 -3.27476 | overlap 1332351 CATATCTAAAAATCA GCTAAAACCATTA GCAG TACTGGCTTTAGC CTTAAAAAATCTAAC TERM 986 1333018 - 1333008 - g 79 -2.6 -5.77856 | AATAAATCAAAAAAA TAAT GGG ATTA ACAATAATTACGAAA PMT9312_1420 1332760 - 1334793 + | alpha amylase domain-containing protein TERM 987 1334822 - 1334842 + F 83 -8.3 -4.11216 | GAATCGAACCCGCAT CTTCAGCTT GGA AGGCTGAGG TTTTACCACTAAACC TERM 988 1336089 - 1336067 - g 72 -4.8 -4.91459 | opp_overlap 1336070, overlap 1336070 GAAGATCCAGAAAAA CCAGCAGGAT TAT ATACTGCTTG GATGGTACTTATTCA PMT9312_1421 1334978 - 1336324 + | GPH family sugar transporter TERM 989 1337031 - 1337013 - g 79 -10.4 -2.58758 | opp_overlap 1337007 1337005 1337029, overlap 1337012 1337015 AGAAGTTGGGACAAG TACAACAG GCG CTGTTGTA ATGACTCTCGTTACT TERM 990 1337029 - 1337015 - g 71 -8.6 -2.83119 | opp_overlap 1337007 1337005, overlap 1337013 1337012 AAGTTGGGACAAGTA CAACAG GCG CTGTTG TAATGACTCTCGTTA PMT9312_1422 1336336 - 1337091 + | putative transporter, membrane component PMT9312_1423 1337096 - 1337500 + | hypothetical protein TERM 991 1337920 - 1337893 - g 77 -10 -2.69319 | overlap 1337892 1337896 1337908 AATCTTTCACACAAC GTAGAGAAACTA GAAT TAGTTTCTCAAC CAATAATCGTAAAGC TERM 992 1337917 - 1337896 - g 80 -10.3 -2.63079 | overlap 1337893 1337892 1337908 CTTTCACACAACGTA GAGAAACTA GAAT TAGTTTCTC AACCAATAATCGTAA TERM 993 1338311 - 1338295 - g 80 -9.5 -3.45737 | GAACGATTAGGAGAA TGGAGAA GAA TTCTCCA AGATTCACTTGGTCT PMT9312_1424 1337536 - 1338546 + | hypothetical protein PMT9312_1425 1338552 - 1339145 + | acyl-phosphate glycerol-3-phosphate acyltransferase PMT9312_1426 1339857 - 1339129 - | orotidine-5'-phosphate decarboxylase PMT9312_1427 1341102 - 1339864 - | tyrosyl-tRNA synthetase TERM 994 1340136 - 1340150 + g 74 -8.6 -3.22396 | overlap 1340135 CAAGGAATAATTTTT CGCAAT TAG ATTGCG CTTTTGATGCTTCTT TERM 995 1340969 - 1340979 + g 79 -2.6 -5.80727 | GGGTCGATTCCGAGT TTAA CCC TTAA TTTTTTATTGTTTTT PMT9312_1428 1341445 - 1341122 - | hypothetical protein PMT9312_1429 1341597 - 1342208 + | hypothetical protein TERM 996 1343431 - 1343421 - g 74 -6.8 -4.26079 | GCAAATGATCTAAAA GCTG CAT CAGC CCAGGCTGGAGAAGA PMT9312_1430 1342233 - 1343705 + | leucyl aminopeptidase PMT9312_1431 1344319 - 1343717 - | peptide methionine sulfoxide reductase lpxB 1345514 - 1344336 - | lipid-A-disaccharide synthase TERM 997 1344404 - 1344427 + g 72 -3.3 -5.2197 | CCCCTAATTCTTTTT TTAAAAGAG TGTAAC CTTTTTTAA TTTTTGATTTTTCTG TERM 998 1344966 - 1344980 + g 85 -5 -5.626 | AATAGTTCTGGCATT CTTCTT TAA AGGAAG TTTTTTTGTCAAATC PMT9312_1433 1346353 - 1345511 - | UDP-N-acetylglucosamine acyltransferase TERM 999 1345986 - 1346004 + g 77 -4 -5.38249 | opp_overlap 1345987, overlap 1345987 TAAGCCATTAACAAA TTATTATT ACC AATAATAG TTTTTTCTCCTTCAT fabZ 1346816 - 1346358 - | (3R)-hydroxymyristoyl-ACP dehydratase lpxC 1347670 - 1346822 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase PMT9312_1436 1349809 - 1347671 - | outer envelope membrane protein-like TERM 1000 1349590 - 1349615 + g 93 -6.4 -5.66989 | opp_overlap 1349612, overlap 1349612 TTTCTTGATTGATAT TTTCTTTATT CTCTGC AATAAAGAAA TTTTTTTCATGTTTA PMT9312_1437 1350584 - 1349856 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 1001 1350071 - 1350045 - G 77 -8.8 -3.7456 | AGAATTATAGCCAAA CTCCAACTTGAA ATC TACAAGTTGAAG CTGAATATTTTTAAA TERM 1002 1351111 - 1351085 - g 73 -8 -3.54935 | opp_overlap 1351091 CAAATCTTGGGCAAA GGAATTTATGCG AGA CGCAAATATTCC AACTGCAAAATTTTG TERM 1003 1351965 - 1351929 - g 91 -8.3 -5.08601 | opp_overlap 1351931 GTATGTCAAGAAAAA GATTTTGATATGGTTTT TGA AAAAGCATATAAAAATC TTAAAGAAATAAATT PMT9312_1438 1350717 - 1352048 + | phosphoribosylamine--glycine ligase TERM 1004 1353859 - 1353883 + G 71 -2.2 -5.44119 | gap 1 CTGGGATATCTCAAA CGGATCAAGAG AAGA TTTTTGA-CCG TTTTTTTAGAGTAGA PMT9312_1439 1352052 - 1354121 + | two-component sensor histidine kinase PMT9312_1440 1355614 - 1354118 - | circadian clock protein KaiC TERM 1005 1355558 - 1355500 - G 84 -6.4 -5.16572 | gap 3, opp_overlap 1355524, overlap 1355502 ATTGAAGCGAAAAAA CAGTTTTGCCAGTACCT-GAAGTACCACT AATA AGTG-TACTTCGAGATACAGGC-AAACCA CCTCTGCAAACATCA TERM 1006 1355557 - 1355502 - G 100 -11.5 -4.20888 | opp_overlap 1355524, overlap 1355500 TGAAGCGAAAAAACA GTTTTGCCAGTACCT-GAAGTACCACT AATA AGTG-TACTTCGAGATACAGGCAAACC ACCTCTGCAAACATC TERM 1007 1355698 - 1355678 - R 72 -4.2 -5.05577 | opp_overlap 1355671 1355678 AAACGAAATTAAAAA TAAATATA TGATT TATATTTA ATTATAAAATTTTTC PMT9312_1441 1356037 - 1355720 - | circadian clock protein KaiB rplU 1356183 - 1356623 + | 50S ribosomal protein L21 rpmA 1356633 - 1356893 + | 50S ribosomal protein L27 PMT9312_1444 1357560 - 1356886 - | hypothetical protein TERM 1008 1357095 - 1357083 - G 70 -6.3 -4.22346 | opp_overlap 1357076, overlap 1357076 TAAACTCATTGAAAA TCTCA ATT TGAGA AGATGGATCTTCAAG PMT9312_1445 1357704 - 1358627 + | tRNA pseudouridine synthase B PMT9312_1446 1359806 - 1358631 - | sporulation protein SpoIID-like TERM 1009 1359594 - 1359604 + g 82 -2.6 -5.95539 | CTCATTTTTCAAAGT TAAA CCT TTTA TTTTTTTATTTGAGA TERM 1010 1359807 - 1359823 + H 71 -6.7 -3.90425 | opp_overlap 1359820 TAATTTAAGTATCAC TTTGTTT GAA AAACAAA TTCTTAATTTGCCTA TERM 1011 1359834 - 1359820 - H 73 -5.8 -4.56775 | opp_overlap 1359807 ACTTTGTTTGAAAAA CAAATT CTT AATTTG CCTAAGTTTGACTAA PMT9312_1447 1359895 - 1360833 + | RNAse Z TERM 1012 1360949 - 1360962 + G 74 -5.3 -4.86293 | opp_overlap 1360949, overlap 1360954 TTCATCACTACATAA GTCTT TTAA AAGAC TTTTAATTTTTCTTC TERM 1013 1360954 - 1360968 + G 77 -4.4 -5.13741 | opp_overlap 1360949, overlap 1360949 CACTACATAAGTCTT TTAAAA GAC TTTTAA TTTTTCTTCCATTGA TERM 1014 1361085 - 1361061 - g 86 -10.1 -3.67792 | opp_overlap 1361066, overlap 1361064 GTAGATGGATTGAAA GAAGATCTTCA TGG TGCAGATCTTC AAAATAATGAATTTG PMT9312_1448 1360908 - 1361468 + | pentapeptide repeat-containing protein TERM 1015 1361503 - 1361522 + T 100 -13.6 -5.21709 | opp_overlap 1361500 1361498 1361503 TATGGTGAAACATTA CCAGGCTC TTGT GAGCCTGG TTTTTTGCTATACCA TERM 1016 1361522 - 1361503 - T 100 -13.6 -2.84801 | opp_overlap 1361503, overlap 1361500 1361498 TATGGTGAAACATTA CCAGGCTC TTGT GAGCCTGG TTTTTTGCTATACCA PMT9312_1449 1361843 - 1361487 - | hypothetical protein TERM 1017 1361878 - 1361858 - R 100 -6.8 -6.06723 | TTTCCCAAAAAAAAA GCCACCTT TCTAG AGGGTGGC AGAGAAGTAATAAAA PMT9312_1450 1362223 - 1361924 - | ferredoxin (2Fe-2S) PMT9312_1451 1363270 - 1362359 - | 50S ribosomal protein L11P methyltransferase PMT9312_1452 1364875 - 1363289 - | putative D-3-phosphoglycerate dehydrogenase (PGDH) TERM 1018 1363502 - 1363477 - G 93 -11.3 -3.62046 | CCAGCTTGCCAATAA TACCAGGCATA TCTC TATGCCTAGTA ACCAACATATATCTG PMT9312_1453 1364975 - 1365541 + | hypothetical protein PMT9312_1454 1365542 - 1366333 + | RNA-binding S4 TERM 1019 1366719 - 1366729 + G 71 -3.2 -5.18643 | ATCAATTTTTTAACT TCAG TCA CTGG TTTTATTTTCCTTGG PMT9312_1455 1366521 - 1367138 + | steroid 5-alpha reductase-like TERM 1020 1367204 - 1367188 - g 95 -8.7 -5.14563 | opp_overlap 1367190 TCTTCTAGGAAAAAA GAGGGTA AAT CACCCTC TAATAAATGGATACA PMT9312_1456 1367131 - 1367682 + | hypothetical protein TERM 1021 1367914 - 1367887 - T 80 -7.9 -4.17425 | gap 1, overlap 1367906 ACAATTATCTTAAAA GGGTAAA-ACTG ATTAA CAGTCTTTACCC TAAAAAATTAGCTTA PMT9312_1457 1368475 - 1367927 - | hypothetical protein PMT9312_1458 1369767 - 1368613 - | deoxyribodipyrimidine photo-lyase family protein TERM 1022 1369549 - 1369567 + g 77 -4.6 -5.1417 | TCTCCAAAATATTTC TTCAACAA ATT TAGTTGAA TTTTTGATTTTGTAC PMT9312_1459 1369920 - 1370849 + | short-chain dehydrogenase/reductase PMT9312_1460 1371110 - 1370844 - | hypothetical protein TERM 1023 1371017 - 1371027 + g 79 -6.8 -4.73864 | CAGCAATCTGAGATG GGGT TAA ACCC TTTTCTATTAATTCA murD 1371211 - 1372617 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 1024 1372791 - 1372779 - g 82 -4.9 -5.3236 | ATAAGTCATAAAAAA TTAAG TTA CTTAA TGCTGAAGGCACAAA PMT9312_1462 1372734 - 1373048 + | MATH domain-containing protein PMT9312_1463 1373785 - 1373057 - | hypothetical protein PMT9312_1464 1374615 - 1374079 - | hypothetical protein TERM 1025 1374195 - 1374215 + g 90 -4.1 -5.9663 | CAAAATTATTTTTCC TAATTGAAT TAT ATTCCATTA TTTTTTTTGATATTT PMT9312_1465 1375097 - 1374612 - | hypothetical protein PMT9312_1466 1375939 - 1375190 - | GAF domain-containing protein TERM 1026 1375816 - 1375827 + g 73 -4.4 -4.95758 | opp_overlap 1375816 TAGGCACATTACAAG TTGC AGCC GCAA TTTTTGTAATATCGT PMT9312_1467 1377289 - 1376042 - | hypothetical protein TERM 1027 1378513 - 1378499 - g 78 -5.8 -4.77122 | CTAGAGAAAAAACAA CAAAAA AGA TTTTTG CTCTCAATATTTCTT PMT9312_1468 1377848 - 1378720 + | hypothetical protein TERM 1028 1379155 - 1379128 - f 88 -5.2 -5.45802 | gap 1, opp_overlap 1379128 TCTCGAAAACAAAAA TTTCTTT-TATTT GTA AAATATAAAGAAA TATATCCGAACTAAT PMT9312_1469 1379173 - 1379448 + | hypothetical protein TERM 1029 1379452 - 1379474 + F 78 -7.2 -4.46404 | opp_overlap 1379455 TTAGGTAGCTAAATA TAAGAAAAAA GAT TTTTTTCTTG TTTTACTATTAATTC TERM 1030 1379471 - 1379455 - f 71 -6.7 -3.84185 | opp_overlap 1379452 GGTAGCTAAATATAA GAAAAAA GAT TTTTTTC TTGTTTTACTATTAA PMT9312_1470 1381193 - 1381555 + | hypothetical protein PMT9312_1471 1382036 - 1381683 - | type I restriction modification DNA-like TERM 1031 1382275 - 1382298 + G 91 -4.6 -5.94713 | overlap 1382276 TAATTATTGGTGCTC TTGGTATTGC AGTA GCAATAGCAG TTTTTTTTGTCGCAT PMT9312_1472 1382220 - 1382438 + | M protein-like PMT9312_1473 1382796 - 1383902 + | fatty acid desaturase, type 2 PMT9312_1474 1384349 - 1384507 + | hypothetical protein TERM 1032 1384528 - 1384514 - g 85 -2.8 -6.15536 | AATGAATAAAAAAAA TTCCCC ACA AAGGAA AACAACTTTAAAATG PMT9312_1475 1384500 - 1384652 + | hypothetical protein TERM 1033 1385895 - 1385878 - g 71 -5.6 -4.62783 | opp_overlap 1385878 1385873 CATTTACTCCAAAAA TGATCC CAATTT GGATCA TTTTCTCATTACTAT TERM 1034 1385878 - 1385895 + G 71 -5.6 -4.57209 | opp_overlap 1385878, overlap 1385873 CATTTACTCCAAAAA TGATCC CAATTT GGATCA TTTTCTCATTACTAT TERM 1035 1386709 - 1386696 - g 88 -6.7 -5.26875 | opp_overlap 1386696 1386695 GTCTTAATTAAAAAA GCCTT TAAA AAGGC ATATCTTTTTAATCC PMT9312_1476 1385670 - 1386845 + | Delta(12)-fatty acid dehydrogenase PMT9312_1477 1387779 - 1387156 - | hypothetical protein PMT9312_1478 1388072 - 1387830 - | hypothetical protein TERM 1036 1388080 - 1388109 + H 72 -9.3 -2.55544 | opp_overlap 1388080 AATTCCAATTAAAAA GAGTCAGCCTGTA TCCC TACTAGCTGACTC TCAATTCCATAGTAA TERM 1037 1388109 - 1388080 - H 100 -11.5 -4.87893 | opp_overlap 1388080 AATTCCAATTAAAAA GAGTCAGCCTGTA TCCC TACTAGCTGACTC TCAATTCCATAGTAA PMT9312_1479 1388360 - 1388467 + | high light inducible protein-like PMT9312_1480 1388467 - 1388607 + | high light inducible protein-like TERM 1038 1388629 - 1388656 + T 100 -10.8 -6.13 | opp_overlap 1388632 TGATATTTATTCAGA GAACAGAATTTA AAAT TGAATTCTGTTC TTTTTTTTTGAATAT TERM 1039 1389046 - 1389034 - T 79 -3.5 -5.80817 | TTTAATACAAAAAAA TTTAT TTA ATAAA AAATGATATCCTAAT PMT9312_1481 1389455 - 1389249 - | high light inducible protein-like TERM 1040 1389596 - 1389611 + H 80 -4.8 -5.45056 | opp_overlap 1389596 TTTTTAAAAAAATAT GAAAAA TTAC TTTTTC TTTATTTTTTTTTGG TERM 1041 1389748 - 1389778 + H 90 -6.9 -5.26119 | TAACTAGGTCGTCAT GAGTTTGCCAGTG GTATA TACTTGCAAGCTC TTTTATTTTTAAAAG TERM 1042 1390234 - 1390245 + H 72 -3 -5.34655 | GTATGCACTTACATT CTTT TAAT AAAG TTTTATTTTTCATTA TERM 1043 1390495 - 1390481 - g 74 -2.2 -5.63103 | opp_overlap 1390482, overlap 1390482 CCCTAATTAAAAAAA CTATTT CCA AAATAA TTACTCCTTGGTATG PMT9312_1482 1390447 - 1391649 + | putative permease PMT9312_1483 1392316 - 1391732 - | hypothetical protein PMT9312_1484 1393132 - 1393581 + | hypothetical protein PMT9312_1485 1394060 - 1393584 - | carbon storage regulator-like PMT9312_1486 1394264 - 1394644 + | hypothetical protein PMT9312_1487 1394967 - 1394770 - | regulatory proteins, DeoR-like PMT9312_1488 1395258 - 1395644 + | hypothetical protein TERM 1044 1397471 - 1397452 - f 73 -3.5 -5.33866 | overlap 1397453 1397463 GAAAGTGATAAAAAA GCCAGGA AATATA TCCTGGA GATAAACCAAAGATA TERM 1045 1397647 - 1397665 + F 95 -11 -4.09628 | opp_overlap 1397647 1397645 AGAGTTTCACCAAGA GGGGTCAA TTT TTGGCCCC TTCTTCTTTAAGATA TERM 1046 1397665 - 1397647 - f 75 -8.8 -3.14229 | opp_overlap 1397647, overlap 1397645 AGAGTTTCACCAAGA GGGGTCAA TTT TTGGCCCC TTCTTCTTTAAGATA TERM 1047 1398385 - 1398400 + F 100 -9 -5.32699 | opp_overlap 1398375 1398383 1398382 1398385 GTAGATCTAAAATTA GAGGGA TAAA TCCCTC TTTTTTAATGTTTAA TERM 1048 1398400 - 1398385 - f 75 -9 -3.12666 | opp_overlap 1398385, overlap 1398375 1398383 1398382 GTAGATCTAAAATTA GAGGGA TAAA TCCCTC TTTTTTAATGTTTAA PMT9312_1489 1398818 - 1398943 + | hypothetical protein TERM 1049 1399012 - 1399032 + F 83 -4.9 -5.48303 | opp_overlap 1399012 CAAATTTTAACCAAT TTTTTTTAA AAC TTGAAAAAA TTTTTTTAACATTAT PMT9312_1490 1399188 - 1399373 + | virion host shutoff protein-like TERM 1050 1399922 - 1399906 - T 100 -12.3 -4.86216 | ACAAAAAATAAGAAA GGGGCTT ATA AAGCCCC AAATAAAAATTCAAA PMT9312_1491 1400078 - 1399950 - | high light inducible protein-like TERM 1051 1400527 - 1400509 - H 85 -10.4 -3.1211 | TACTATATGATTTAA CGCAAAAA ATG TTTTTGCG TAGATGAGCTCTCAA TERM 1052 1400737 - 1400712 - H 100 -7.6 -5.85178 | opp_overlap 1400717, overlap 1400715 AATACCTAAAAAAAA TAAGAGGGCA TTTTTT TGCCCTCTTC GAGTCGTATGCACCT TERM 1053 1400734 - 1400715 - H 100 -9.3 -4.97383 | opp_overlap 1400717, overlap 1400712 ACCTAAAAAAAATAA GAGGGCA TTTTTT TGCCCTC TTCGAGTCGTATGCA PMT9312_1492 1400923 - 1401087 + | hypothetical protein TERM 1054 1401931 - 1401919 - g 74 -7.7 -3.78394 | overlap 1401915 AACTAAACAAATTAA GCCTT ATT AAGGC TAGAAAAAGTCCTCC PMT9312_1493 1401510 - 1402028 + | hemagglutinin-neuraminidase-like PMT9312_1494 1402078 - 1403469 + | nucleotide binding protein, PINc TERM 1055 1404146 - 1404157 + G 95 -5.8 -5.86061 | opp_overlap 1404145 ATTTTGTTATGAGAT CTGC TGCT GCAG TTTTTTTTCCTGGAG PMT9312_1495 1403518 - 1404393 + | putative dape protein PMT9312_1496 1405034 - 1404720 - | hypothetical protein TERM 1056 1404772 - 1404792 + g 82 -7.7 -4.39571 | opp_overlap 1404772 1404767, overlap 1404777 1404778 CAATCAGCAAGATCA TCATTTTGG GGA TCAAAATGA TTTTCAGTTTCTAAA PMT9312_1497 1405346 - 1406062 + | dienelactone hydrolase PMT9312_1498 1407113 - 1407454 + | hypothetical protein TERM 1057 1407867 - 1407849 - g 75 -2.4 -5.64873 | overlap 1407850 CCCAATAATAAAAAA CGCAATAA GTC TTATAGCA ATAATAGGAACTTGA PMT9312_1499 1407588 - 1407890 + | RNA-binding region RNP-1 PMT9312_1500 1408017 - 1408154 + | gibberellin regulated protein-like PMT9312_1501 1408155 - 1408403 + | fumarate reductase subunit D-like TERM 1058 1409136 - 1409117 - T 70 -2.1 -5.48213 | opp_overlap 1409111 1409119, overlap 1409119 CATTGAAAAGAAAAA GAGAGGT ATAAGA ACCTCTT TTTTTAACTTTTTAT TERM 1059 1409119 - 1409134 + T 86 -4.7 -5.63857 | opp_overlap 1409117 1409119, overlap 1409111 TTGAAAAGAAAAAGA GAGGT ATAAGA ACCTC TTTTTTTAACTTTTT PMT9312_1502 1409471 - 1409157 - | hypothetical protein PMT9312_1503 1409956 - 1409558 - | hypothetical protein TERM 1060 1409780 - 1409794 + g 78 -5.7 -4.79053 | ATCATTAATAGTTTG GCCTT CAATT AAGGC TTTCTTTTGGTATTT PMT9312_1504 1410841 - 1410284 - | hypothetical protein PMT9312_1505 1410960 - 1411178 + | hypothetical protein PMT9312_1506 1411271 - 1411696 + | hypothetical protein PMT9312_1507 1411909 - 1411730 - | hypothetical protein PMT9312_1508 1412134 - 1412006 - | high light inducible protein-like PMT9312_1509 1412319 - 1412167 - | high light inducible protein-like PMT9312_1510 1412638 - 1412429 - | high light inducible protein-like PMT9312_1511 1412814 - 1412638 - | hypothetical protein TERM 1061 1412868 - 1412836 - R 72 -9.3 -2.50077 | opp_overlap 1412835, overlap 1412833 1412832 CCCTGATAAAAGTAT TTCTATACAGTACTG TTA CATAACTGTATAGAA GTAAGTTAAACGCGG TERM 1062 1413040 - 1413065 + r 70 -6.4 -4.09243 | GCTGCAAAACACTTA TTTAATTAGA AAAACG TCTAATTAAA TTTTAAAAAAGTCTC PMT9312_1512 1414475 - 1413180 - | hypothetical protein TERM 1063 1413925 - 1413912 - G 74 -3.9 -5.27335 | GCTTTCAAAGAAAAA CTTAT CAGA ATAAG CCGATGTCTTTGTAG TERM 1064 1414795 - 1414810 + H 90 -6.1 -5.61596 | overlap 1414798 AGTCGATCTAACATG GAGGG GTAAAA CCCTC TTTTTTTATGGAACT TERM 1065 1414798 - 1414808 + H 76 -6.8 -4.45201 | overlap 1414795 CGATCTAACATGGAG GGGT AAA ACCC TCTTTTTTTATGGAA PMT9312_1513 1414818 - 1415450 + | trypsin-like PMT9312_1514 1416305 - 1415688 - | hypothetical protein TERM 1066 1416074 - 1416084 + g 74 -4 -5.19275 | GAGGAGTAAAATCAG GAAA CTT TTTC TTTTGTTTTATAGCT PMT9312_1515 1417595 - 1416441 - | hypothetical protein PMT9312_1516 1417670 - 1417927 + | hypothetical protein TERM 1067 1418318 - 1418307 - g 77 -4.4 -5.2166 | GAAGAAGCGAAAAAA CTTG GATG CAAG GGGATTCATAAAATG PMT9312_1517 1417935 - 1418378 + | hypothetical protein TERM 1068 1418398 - 1418383 - f 100 -5.4 -5.85425 | opp_overlap 1418383, overlap 1418395 TAAATAAATAAAAAA GAGGCT TTAA AACCTC TTTTTAGAAAGGAGG PMT9312_1518 1418523 - 1418651 + | twin-arginine translocation pathway signal sequence domain-containing protein TERM 1069 1418812 - 1418800 - g 82 -7.7 -4.37991 | GAAAAACATTGAAAA GCTTG CAA CAAGC TTCAGGAGAGTTTCA PMT9312_1519 1418682 - 1418951 + | twin arginine-targeting protein translocase PMT9312_1520 1419587 - 1419333 - | poly A polymerase regulatory subunit-like PMT9312_1521 1419857 - 1420315 + | hypothetical protein PMT9312_1522 1420575 - 1420324 - | hypothetical protein PMT9312_1523 1421261 - 1420890 - | hypothetical protein TERM 1070 1421158 - 1421144 - G 79 -7.2 -4.50859 | opp_overlap 1421144 GAAGTAAAATATAAA GTGAAT AAA ATTCAC TTTTCTGTAACTCAA TERM 1071 1421144 - 1421158 + g 80 -7.2 -4.55287 | opp_overlap 1421144 GAAGTAAAATATAAA GTGAAT AAA ATTCAC TTTTCTGTAACTCAA PMT9312_1524 1421500 - 1421264 - | DNA-directed RNA polymerase subunit omega TERM 1072 1421809 - 1421821 + G 72 -3.5 -5.27477 | GATGATAAATAGCTC TAATT CAG AATTA TTTTTTCATTCGAAT TERM 1073 1422837 - 1422824 - g 73 -8.1 -3.54459 | CCAATTTTTTGCAAA GGCCA AACA TGGCC TACTGAAAACCCATT PMT9312_1525 1421597 - 1423165 + | HSP70 family molecular chaperone PMT9312_1526 1423709 - 1423173 - | pyrimidine regulatory protein PyrR TERM 1074 1425312 - 1425299 - g 86 -3.8 -5.75538 | GTGAAAAAAGAAAAA TCCC GAATAT GGGA AATGAGATTTATTTA PMT9312_1527 1423846 - 1425468 + | phosphoglyceromutase secG 1425492 - 1425719 + | preprotein translocase subunit SecG TERM 1075 1425759 - 1425735 - T 100 -14.5 -5.5074 | opp_overlap 1425735 TAATTGAATAAAAAA GAGAGATCATT CAA AATGATCTCTC TTTAAAAAGTTAATT TERM 1076 1425735 - 1425759 + T 100 -14.5 -3.58305 | opp_overlap 1425735 TAATTGAATAAAAAA GAGAGATCATT CAA AATGATCTCTC TTTAAAAAGTTAATT groEL 1427429 - 1425792 - | chaperonin GroEL TERM 1077 1426433 - 1426447 + g 80 -7.2 -4.70887 | overlap 1426430 GCTCATTACCTTCAG CTACAA TAG TTGTAG TTTCTTTATTGATAG groES 1427792 - 1427481 - | co-chaperonin GroES TERM 1078 1429361 - 1429344 - g 77 -8.5 -3.60865 | opp_overlap 1429341, overlap 1429353 TACGTCAAATTAGAA GAAACCA TAGC TGGTTTC AACATGATTTTGTCA PMT9312_1531 1428012 - 1429472 + | F0F1 ATP synthase subunit beta atpC 1429514 - 1429918 + | F0F1 ATP synthase subunit epsilon PMT9312_1533 1430398 - 1429922 - | hypothetical protein TERM 1079 1430155 - 1430127 - G 70 -7.3 -3.75505 | opp_overlap 1430127 GGCCAAAAATTATAA GCAGTGAGAGGGC TTG GGCCTCCCCCTAC TATTTGATCAACAGC PMT9312_1534 1430662 - 1430504 - | hypothetical protein PMT9312_1535 1432043 - 1430718 - | putative aminopeptidase P TERM 1080 1430921 - 1430903 - G 77 -8.2 -3.7732 | opp_overlap 1430886 1430906, overlap 1430887 GTTCTACAGTAAGAA CCATTCCA TTC TGAAATGG CACTTCATATTCTCC TERM 1081 1431582 - 1431622 + g 70 -8 -3.09842 | gap 2, overlap 1431581 1431583 TGCACCAATGCCCAA T-CTTGAGATATTTTC-CAG TTG TTGTGAAAATATCTCAAGTA CTATTTTTTCAATCG TERM 1082 1431583 - 1431620 + g 100 -13.1 -3.09579 | gap 1, overlap 1431582 1431581 GCACCAATGCCCAAT CTTGAGATATTTTC-CAG TTG TTGTGAAAATATCTCAAG TACTATTTTTTCAAT TERM 1083 1432468 - 1432480 + G 70 -6.3 -4.18494 | opp_overlap 1432467 AGTACTACCCAAAGC TCTTG GTA CAAGA TTTTCAGTCCAAATA PMT9312_1536 1432118 - 1433095 + | hypothetical protein PMT9312_1537 1433099 - 1434340 + | small GTP-binding protein domain-containing protein nadD 1434349 - 1434927 + | nicotinic acid mononucleotide adenylyltransferase PMT9312_1539 1434924 - 1436621 + | NAD+ synthetase PMT9312_1540 1437676 - 1436618 - | hypothetical protein PMT9312_1541 1437898 - 1437707 - | hypothetical protein PMT9312_1542 1438221 - 1437895 - | ferredoxin (2Fe-2S) PMT9312_1543 1439192 - 1438242 - | F0F1 ATP synthase subunit gamma PMT9312_1544 1440729 - 1439212 - | F0F1 ATP synthase subunit alpha PMT9312_1545 1441302 - 1440760 - | F0F1 ATP synthase subunit delta TERM 1084 1441026 - 1441012 - G 74 -5.8 -4.64657 | GTAAATCTCTAAAAA TCTATT AAG AATAGA TGTGAGAATTCCAAT PMT9312_1546 1441814 - 1441302 - | F0F1 ATP synthase subunit B TERM 1085 1441435 - 1441453 + g 82 -9.6 -3.737 | opp_overlap 1441434 CGAAGTTGAGAAATT GCTCTGGA TGC TTCAGAGC TTTCATCAGAGATTG TERM 1086 1441567 - 1441592 + g 85 -4.7 -5.55698 | overlap 1441569 GCTTTAATTTGACTA GCCTTCTCTTC TGCT GAAGATAAGTC TTTTTTTGCCTTATC TERM 1087 1441569 - 1441590 + g 72 -5.9 -4.40173 | overlap 1441567 TTTAATTTGACTAGC CTTCTCTTC TGCT GAAGATAAG TCTTTTTTTGCCTTA PMT9312_1547 1442272 - 1441811 - | F0F1 ATP synthase subunit B' TERM 1088 1441928 - 1441943 + g 73 -7.6 -3.63837 | TCTTGCTTTTTCTTT TGAAGC ATTT GCTTCA TTGTTAGCAAGTTCT TERM 1089 1442032 - 1442062 + g 100 -10.6 -5.0538 | overlap 1442035 CTTCTGTACGAGCAC TTTGAAGCTGAGTT AAT AATTCAGCTTCTAA TTTTTTAACCTCAGA TERM 1090 1442035 - 1442059 + g 91 -12.3 -3.38726 | overlap 1442032 CTGTACGAGCACTTT GAAGCTGAGTT AAT AATTCAGCTTC TAATTTTTTAACCTC PMT9312_1548 1442586 - 1442341 - | F0F1 ATP synthase subunit C TERM 1091 1442734 - 1442712 - R 72 -9.2 -2.62396 | opp_overlap 1442710, overlap 1442714 1442716 TATCTTGCCAGATTA CAGACCCTTT GTA AAAGCGTCTG AATGTATAAGAAGAA PMT9312_1549 1443477 - 1442752 - | F0F1 ATP synthase subunit A PMT9312_1550 1443977 - 1443501 - | ATP synthase subunit 1-like TERM 1092 1444114 - 1444138 + H 70 -7.3 -3.63435 | overlap 1444110 ATCTGTAGACCGTAT TCTTCAAAAAT AAA ATTTATGAAGA TTAATCTTTTTAATT TERM 1093 1444505 - 1444495 - g 77 -4 -5.41143 | opp_overlap 1444504 TACTTCTTAAAAAAA CAAA TTA TTTG GACAATTCCAGGAAT TERM 1094 1444504 - 1444527 + G 70 -4 -5.03713 | gap 1, opp_overlap 1444495, overlap 1444505 1444508 AAAAAACAAATTATT TGGA-CAATTC CAG GAATTGGTCTA TTTTATTTCGTTCTT PMT9312_1551 1444237 - 1445472 + | cell division protein FtsW TERM 1095 1446145 - 1446161 + G 79 -8 -4.05402 | opp_overlap 1446144 1446145, overlap 1446144 ATTTAGCCAAATAAT TCCCAC CTTAA GTGGGA TATTTTTAGTTGCCC TERM 1096 1446161 - 1446145 - g 71 -8.7 -2.97676 | opp_overlap 1446145 1446144, overlap 1446144 ATTTAGCCAAATAAT TCCCACC TTA AGTGGGA TATTTTTAGTTGCCC PMT9312_1552 1445555 - 1446211 + | putative c-type cytochrome biogenesis protein CcdA TERM 1097 1447285 - 1447266 - g 71 -2.2 -5.41143 | TATCTCTGAAAAAAA TAATCC CAAGCAGT GGATTA ATAATTAAAAATGAT PMT9312_1553 1446212 - 1447498 + | putative c-type cytochrome biogenesis protein Ccs1 PMT9312_1554 1447905 - 1447495 - | 7-cyano-7-deazaguanine reductase TERM 1098 1447749 - 1447736 - G 71 -6.7 -4.08767 | TTTAGCTTTGCAAAA TCTGG ATAA CCAGA AAAGGGGCACTTACA PMT9312_1555 1448083 - 1448328 + | hypothetical protein PMT9312_1556 1448353 - 1448691 + | nitrogen regulatory protein P-II TERM 1099 1448680 - 1448704 + T 82 -8 -4.34771 | opp_overlap 1448680 1448683, overlap 1448684 GGTGACAAAGATGAA GAAGCTCTTT AATTC AAAGAGTTTC TTTTACTAAATTTTG TERM 1100 1448684 - 1448700 + T 70 -5.2 -4.7261 | opp_overlap 1448683 1448680, overlap 1448680 ACAAAGATGAAGAAG CTCTTT AATTC AAAGAG TTTCTTTTACTAAAT PMT9312_1557 1449505 - 1448693 - | hemolysin A PMT9312_1558 1449788 - 1451083 + | adenylosuccinate lyase fumC 1451132 - 1452517 + | fumarate hydratase PMT9312_1560 1455251 - 1452525 - | DEAD/DEAH box helicase-like TERM 1101 1453129 - 1453111 - G 90 -9 -4.62203 | overlap 1453121 TTTAAACAACCAAAA TGATTCAA AAT TTGAATCA AATCGGTAAAAGTTC TERM 1102 1454959 - 1454939 - G 76 -6.2 -4.57569 | opp_overlap 1454939 GCATGTTCCTAAAAA TCTCAGTC GTCAT GACTAAGA TTGGTGCTTCTCTAT PMT9312_1561 1455391 - 1456530 + | putative 8-amino-7-oxononanoate synthase PMT9312_1562 1456527 - 1457231 + | hypothetical protein PMT9312_1563 1457224 - 1457994 + | biotin synthesis protein BioC, putative PMT9312_1564 1457991 - 1458656 + | dethiobiotin synthase TERM 1103 1459366 - 1459356 - g 74 -4 -5.15634 | overlap 1459357 CAGTTTATTAAAAAA GTTT CAG AAAC TGTAAAAAATAATAA TERM 1104 1459747 - 1459736 - g 74 -3 -5.37043 | ACCTTATATAAAAAA GATA AGAG TATC TGGAACCATTGCTGC PMT9312_1565 1458657 - 1459958 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase PMT9312_1566 1460224 - 1459967 - | hypothetical protein PMT9312_1567 1460681 - 1460241 - | heat shock protein DnaJ-like PMT9312_1568 1460771 - 1461484 + | methyltransferase GidB PMT9312_1569 1462680 - 1461487 - | aldo/keto reductase PMT9312_1570 1463048 - 1462689 - | hypothetical protein PMT9312_1571 1463450 - 1463058 - | hypothetical protein PMT9312_1572 1463652 - 1463437 - | hypothetical protein TERM 1105 1463839 - 1463815 - R 74 -5 -4.98857 | ATTTAATTATAAAAA CCTTGCATCC CCATT GAATCCAAGG CAGTTTTTGCTTCTT PMT9312_1573 1464569 - 1463802 - | HEAT repeat-containing PBS lyase TERM 1106 1463863 - 1463889 + g 71 -8.1 -3.22884 | overlap 1463855 GCTTCTTCCATAACG GATGGCTCTTT ATCGA AAAGGGCTATC TTGGTACATTCATCA PMT9312_1574 1465829 - 1464783 - | putative Fe-S-cluster redox protein PMT9312_1575 1466011 - 1465859 - | putative high light inducible protein PMT9312_1576 1470165 - 1466065 - | DNA-directed RNA polymerase subunit beta' PMT9312_1577 1472103 - 1470199 - | DNA-directed RNA polymerase subunit gamma rpoB 1475435 - 1472142 - | DNA-directed RNA polymerase subunit beta TERM 1107 1474835 - 1474821 - G 74 -6.4 -4.37886 | opp_overlap 1474821, overlap 1474805 TGAGTTTTGATAAAA CTCAGG ATG CCTAAG TTTATCGACAACATC PMT9312_1579 1476467 - 1475673 - | putative deoxyribonuclease, TatD family rpsT 1476778 - 1476485 - | 30S ribosomal protein S20 TERM 1108 1477194 - 1477180 - g 72 -2.8 -5.43514 | overlap 1477169 AAAAGAATTAAAAAA TTCCAT GAA AAGGAA ATTCCACAATCTTTC PMT9312_1581 1476862 - 1478184 + | histidinol dehydrogenase PMT9312_1582 1478894 - 1478181 - | ribose-5-phosphate isomerase TERM 1109 1478849 - 1478863 + g 71 -8.6 -2.93149 | overlap 1478848 1478846 TCTTTACTTCCTCAA TTGCTG CTT CAGCAA CTATTTGTTTCATTT PMT9312_1583 1480071 - 1478941 - | trypsin-like serine protease PMT9312_1584 1480233 - 1480700 + | hypothetical protein nusA 1480736 - 1482142 + | transcription elongation factor NusA TERM 1110 1482332 - 1482321 - g 91 -4.4 -5.94597 | opp_overlap 1482321 CAAGATCAAAAAAAA GCTT CAAA AAGC TTTAAAAACATTTTT PMT9312_1586 1482139 - 1482420 + | hypothetical protein TERM 1111 1482636 - 1482620 - g 84 -2.3 -6.17033 | overlap 1482621 1482622 AAAAAAAATAAAAAA TCTTATT AAT AAAAAGA ATTCAGATAAACAAA TERM 1112 1483143 - 1483130 - g 77 -3.9 -5.38497 | ACCTAAACCAAAAAA TTCTA ATAA TAGAA GAAACACCCCTGAGC infB 1482468 - 1485854 + | translation initiation factor IF-2 PMT9312_1588 1486107 - 1485871 - | hypothetical protein PMT9312_1589 1486373 - 1487464 + | glycosyl transferase family protein TERM 1113 1488360 - 1488349 - g 83 -5.8 -5.27335 | opp_overlap 1488348 GGGTGCAAACAAAAA GAGG TTGT CCTC ATAATTGTTGTTTCT TERM 1114 1488609 - 1488624 + G 78 -9 -3.4252 | GCAGATAATATTGAT GCTGAG CTAG CTCAGC TTATGGTGGATACAG PMT9312_1590 1487571 - 1489190 + | Fe-S oxidoreductase clpS 1489527 - 1489210 - | ATP-dependent Clp protease adaptor protein ClpS PMT9312_1592 1490786 - 1489560 - | L,L-diaminopimelate aminotransferase TERM 1115 1491270 - 1491259 - gH 73 -4.4 -4.94992 | opp_overlap 1491259 TGAAAGTGATAAAAA TGGA TTCA TCCA TGTTTCAGATCTAGG TERM 1116 1492273 - 1492253 - gH 100 -8.4 -5.02074 | TTATTCGGTAAAAAA TGTTCCAT ATGCA ATGGAACA GGACATGTAGAAAAT TERM 1117 1492611 - 1492591 - gH 75 -8.4 -3.41581 | TAATCCACTAATCAA GTTAGGTA AAGAA TACCTAAC CAGTAATAATTTTGT TERM 1118 1492875 - 1492863 - g 100 -6.3 -5.94713 | ATGCGAGAAAAAAAA GAAGA AGA TCTTC AGCAAGTATTGAATA PMT9312_1593 1491074 - 1492891 + | ribonuclease PMT9312_1594 1492848 - 1493465 + | RNase HII PMT9312_1595 1493969 - 1493451 - | hypothetical protein PMT9312_1596 1494022 - 1494867 + | chorismate mutase-prephenate dehydratase PMT9312_1597 1495804 - 1494869 - | SAM-binding motif-containing protein PMT9312_1598 1496461 - 1495805 - | ATP-dependent protease La (LON) domain rpsJ 1496838 - 1496518 - | 30S ribosomal protein S10 PMT9312_1600 1498140 - 1496941 - | elongation factor Tu PMT9312_1601 1500261 - 1498186 - | elongation factor G PMT9312_1602 1500829 - 1500359 - | 30S ribosomal protein S7 TERM 1119 1500864 - 1500879 + r 73 -9 -2.7736 | overlap 1500861 TACAAATTAATCTTT TGGAGC TTTT GCTCCA TACTTAGATCTGGAT rpsL 1501229 - 1500855 - | 30S ribosomal protein S12 TERM 1120 1502566 - 1502554 - g 77 -7.7 -4.05747 | CACACTTGATAGAAA TGGTC TAA GACCA GCAAGATATTCAATT TERM 1121 1502670 - 1502657 - g 74 -3.8 -5.16206 | AAAGTAATAGAAAAA GGTC GATTAG GACC GGGACAAATGTTAGC TERM 1122 1504919 - 1504891 - g 72 -8.9 -2.63435 | opp_overlap 1504891 1504893, overlap 1504890 1504912 TGAAGGATGCATAAT GGCACGTGTTTGT CAT ACAAACAAGTGTC CTGTTGGAGTAGCTA TERM 1123 1504891 - 1504920 + G 72 -8.7 -3.06492 | gap 1, opp_overlap 1504891 1504890 1504912, overlap 1504893 TGAAGGATGCATAAT GG-CACGTGTTTGT CAT ACAAACAAGTGTCC TGTTGGAGTAGCTAC TERM 1124 1504893 - 1504917 + G 77 -10.1 -2.75074 | opp_overlap 1504891 1504890 1504912, overlap 1504891 AAGGATGCATAATGG CACGTGTTTGT CAT ACAAACAAGTG TCCTGTTGGAGTAGC TERM 1125 1505185 - 1505146 - g 71 -6.6 -4.00042 | overlap 1505180 TTCTTTAGTAAATAA TGAATGCTCAAACAATGA TAGA TCATGGTTAAAACATTCA AAAAATGCTCATAAT TERM 1126 1505540 - 1505529 - g 78 -5.8 -4.78933 | CGAAAATAGATAAAA GCTC CTCC GAGC AGGTTATTTTAGGAA PMT9312_1604 1501586 - 1505992 + | ferredoxin-dependent glutamate synthase PMT9312_1605 1506000 - 1506293 + | hypothetical protein PMT9312_1606 1507194 - 1506301 - | lipoyl synthase TERM 1127 1507605 - 1507592 - g 90 -3.9 -5.94743 | opp_overlap 1507599, overlap 1507599 TAAAAAAAATAAAAA CTATA AAGC TATAG GATATGCTAGAGCTA PMT9312_1607 1507488 - 1508162 + | site-specific recombinase PMT9312_1608 1508164 - 1508376 + | hypothetical protein PMT9312_1609 1509281 - 1508373 - | hypothetical protein TERM 1128 1509777 - 1509766 - g 71 -3 -5.27335 | CTTTTCAAATAAAAA GTTT TTGT AAAC ACCTTTTTTATTTCA PMT9312_1610 1509285 - 1510043 + | hypothetical protein PMT9312_1611 1510682 - 1510092 - | photosystem I reaction center protein subunit XI psaI 1510826 - 1510713 - | photosystem I reaction center subunit VIII TERM 1129 1510768 - 1510757 - G 71 -2.2 -5.4593 | overlap 1510759 TTAAAACAATAAAAA CAGC AGGT GCTA CCAAGCCAATCATGG PMT9312_1613 1510919 - 1511302 + | annexin-like PMT9312_1614 1512269 - 1511295 - | glycosyl transferase family protein TERM 1130 1512366 - 1512321 - R 100 -11.5 -4.95547 | opp_overlap 1512335, overlap 1512335 TTTAGAAGAATAAAA TTAAACAAAAAAAATCACCAC ATTC GTGGTGATTTGTATTATTTAA GAAGACTTTAACCGA TERM 1131 1512335 - 1512352 + r 91 -9.9 -4.40333 | opp_overlap 1512321 1512335 ATTAAACAAAAAAAA TCACCAC ATTC GTGGTGA TTTGTATTATTTAAG TERM 1132 1512352 - 1512335 - R 100 -9.9 -6.25578 | opp_overlap 1512335, overlap 1512321 ATTAAACAAAAAAAA TCACCAC ATTC GTGGTGA TTTGTATTATTTAAG psaB 1514602 - 1512374 - | photosystem I P700 chlorophyll a apoprotein A2 TERM 1133 1514462 - 1514485 + g 70 -8.3 -3.1364 | opp_overlap 1514467, overlap 1514467 ACCAAAATGGGTAGA GAAAAGCTT CTGATA AAGCTTTTC TTCAGTCATTCCATC psaA 1516933 - 1514630 - | photosystem I P700 chlorophyll a apoprotein A1 TERM 1134 1515213 - 1515197 - G 74 -9.5 -2.71791 | opp_overlap 1515199, overlap 1515196 1515199 ACTTCTTGCGTAAAG TACTCCT TTA AGGAGTA TTAAAACGGTTACAT TERM 1135 1516349 - 1516363 + g 74 -7.2 -4.0896 | CATTGACTCAATATT TTGGAA CCA TTCCAA TTTTGGAGCAGCTTT TERM 1136 1518101 - 1518113 + G 72 -3.4 -5.14563 | opp_overlap 1518101 CGCTGAAGAAAATAA CTTG CCTAT CAAG TTTTTTACTAAAGAA PMT9312_1617 1517268 - 1519088 + | precorrin-3 methyltransferase PMT9312_1618 1519181 - 1519969 + | putative imidazoleglycerol-phosphate dehydratase PMT9312_1619 1520452 - 1520141 - | hypothetical protein alr 1522086 - 1520887 - | alanine racemase PMT9312_1621 1522104 - 1522661 + | HNH endonuclease family protein prfA 1523768 - 1522674 - | peptide chain release factor 1 TERM 1137 1523650 - 1523681 + g 75 -9.6 -2.89191 | overlap 1523655 TTTGACCTTTCTCTT GCTATTGATTCTAA TTTT TTAGGATCATTAGC TATATCAGGATCTGC rpmE 1524057 - 1523797 - | 50S ribosomal protein L31 rpsI 1524481 - 1524071 - | 30S ribosomal protein S9 rplM 1524922 - 1524491 - | 50S ribosomal protein L13 truA 1525844 - 1525038 - | tRNA pseudouridine synthase A TERM 1138 1525837 - 1525847 + g 81 -4 -5.67063 | ACTAATAAAGCTATC CTTT TCA AAAG TTTTTTTCTAATAAA rplQ 1526233 - 1525883 - | 50S ribosomal protein L17 PMT9312_1628 1527184 - 1526249 - | DNA-directed RNA polymerase subunit alpha TERM 1139 1527240 - 1527265 + r 75 -8.4 -3.38118 | opp_overlap 1527242 GTTGAGAATGGTTAA GATCTAAACG CGTCTC CGTTTAGGTC TTCTACATCCATTAT PMT9312_1629 1527635 - 1527243 - | 30S ribosomal protein S11 TERM 1140 1527419 - 1527439 + g 80 -9.7 -3.53224 | overlap 1527421 GATCAAGTGCTCTCC TAGCTGCTG CTT CAGCGGCTG TTTGAGCGGCAAATG TERM 1141 1527421 - 1527437 + g 82 -10.1 -3.34398 | overlap 1527419 TCAAGTGCTCTCCTA GCTGCTG CTT CAGCGGC TGTTTGAGCGGCAAA rpsM 1528045 - 1527680 - | 30S ribosomal protein S13 rpmJ 1528203 - 1528087 - | 50S ribosomal protein L36 PMT9312_1631 1528797 - 1528249 - | adenylate kinase secY 1530116 - 1528797 - | preprotein translocase subunit SecY rplO 1530605 - 1530147 - | 50S ribosomal protein L15 rpsE 1531234 - 1530611 - | 30S ribosomal protein S5 TERM 1142 1530699 - 1530682 - G 77 -7.7 -3.97368 | opp_overlap 1530682 1530678 1530677, overlap 1530678 TTCTTAATTGAGAAA GAGCTAC CATA GCAGCTC TTGCATTATTTAAAG rplR 1531618 - 1531250 - | 50S ribosomal protein L18 TERM 1143 1531535 - 1531525 - G 71 -5.4 -4.7173 | TATTAGAGCGAAAAA CAGA CAA TCTG GGACGCGTTGCATCT rplF 1532173 - 1531634 - | 50S ribosomal protein L6 rpsH 1532587 - 1532186 - | 30S ribosomal protein S8 rplE 1533136 - 1532597 - | 50S ribosomal protein L5 rplX 1533567 - 1533211 - | 50S ribosomal protein L24 TERM 1144 1533282 - 1533295 + g 74 -3.9 -5.28983 | opp_overlap 1533282 CAATAAAGTATTCAA TCTTA CTTG TAAGA TTTTTATCTTTTGAA rplN 1533933 - 1533568 - | 50S ribosomal protein L14 rpsQ 1534196 - 1533930 - | 30S ribosomal protein S17 PMT9312_1642 1534425 - 1534207 - | 50S ribosomal protein L29 rplP 1534904 - 1534422 - | 50S ribosomal protein L16 rpsC 1535647 - 1534916 - | 30S ribosomal protein S3 TERM 1145 1535316 - 1535301 - G 71 -3.2 -5.1675 | opp_overlap 1535307 TCAGCCAGTAAAAAA GCGTCG GCGT CAACAC GCTCTACTTCAACAA TERM 1146 1535555 - 1535541 - G 76 -7.2 -4.20696 | opp_overlap 1535543 GTACGAATTTTAAAA TCTTCT TGG AGAAGA ATTGGATATGTCTTG rplV 1536033 - 1535647 - | 50S ribosomal protein L22 TERM 1147 1535745 - 1535732 - G 70 -3.8 -4.96848 | TTTTTGATAGAAAAA GCTC TACCTT GAGC TCTAGGCCTATACCT rpsS 1536308 - 1536030 - | 30S ribosomal protein S19 rplB 1537209 - 1536346 - | 50S ribosomal protein L2 rplW 1537523 - 1537221 - | 50S ribosomal protein L23 rplD 1538152 - 1537520 - | 50S ribosomal protein L4 rplC 1538802 - 1538149 - | 50S ribosomal protein L3 TERM 1148 1538761 - 1538775 + g 72 -5.7 -4.49958 | opp_overlap 1538761 1538760 TTTGTCATCGAAAAG TTGGG ACATA CCCAA TTTCTTTCCTAAAAT PMT9312_1651 1539084 - 1539560 + | NADH dehydrogenase I subunit N TERM 1149 1540547 - 1540529 - g 74 -3.9 -5.1675 | gap 1 TTAGCGATCAAAAAA GCTC-AGA AATT TCTAGAGC CATGGAAATCGAGCT PMT9312_1652 1539566 - 1540573 + | hypothetical protein PMT9312_1653 1540756 - 1541538 + | hypothetical protein TERM 1150 1541707 - 1541687 - g 100 -8.3 -5.54338 | opp_overlap 1541687 1541689 1541692 GAATCAAAAGAAAAA GACAAGGCT TTA AGTCTTGTC TTAGGTCAAATAGAA TERM 1151 1541687 - 1541707 + G 83 -10.5 -3.06796 | opp_overlap 1541687, overlap 1541689 1541692 GAATCAAAAGAAAAA GACAAGGCT TTA AGTCTTGTC TTAGGTCAAATAGAA recA 1541645 - 1542742 + | recombinase A PMT9312_1655 1542990 - 1542745 - | hypothetical protein PMT9312_1656 1544468 - 1543020 - | hypothetical protein TERM 1152 1543696 - 1543682 - G 77 -2.9 -5.67967 | ATGATGATAAAAAAA CAAAT TTATT ATTTG AAAAAAATTCCTTAA PMT9312_1657 1544563 - 1545402 + | arogenate dehydrogenase PMT9312_1658 1546897 - 1545392 - | UDP-galactopyranose mutase TERM 1153 1546216 - 1546232 + g 70 -8 -3.03771 | opp_overlap 1546215 1546227 TAGATTTTTTAAGAT GCCACA GACCA TGTGGC TGTTGACACATCTGA TERM 1154 1547271 - 1547285 + G 77 -8.6 -3.66356 | opp_overlap 1547270 TCAGCTGAATCTAAT CCCAAA ATG TTTGGG TTTCCAGTTGAGGGT PMT9312_1659 1546902 - 1547780 + | hypothetical protein PMT9312_1660 1548159 - 1547788 - | hypothetical protein PMT9312_1661 1548452 - 1549594 + | rhodanese-like protein PMT9312_1662 1550769 - 1549609 - | hypothetical protein TERM 1155 1549724 - 1549752 + g 72 -2.4 -5.40474 | TCATTTTTACATCTC CCAGTAATAACA ACTTC TGTTTCTGCTGG TTTTTTTAAGAGCGT TERM 1156 1550249 - 1550265 + g 79 -10.1 -2.90492 | opp_overlap 1550246 1550249 ATTCTTACCAAAGAA GGAGGGG CTG CCCTTCC TGTAATAATTATTTC TERM 1157 1550265 - 1550249 - G 77 -7.9 -4.0031 | opp_overlap 1550249, overlap 1550246 ATTCTTACCAAAGAA GGAGGGG CTG CCCTTCC TGTAATAATTATTTC PMT9312_1663 1550878 - 1551702 + | hypothetical protein PMT9312_1664 1552146 - 1551712 - | S-adenosylmethionine decarboxylase proenzyme PMT9312_1665 1553093 - 1552200 - | DNA replication and repair protein RecF PMT9312_1666 1553899 - 1553453 - | hypothetical protein TERM 1158 1553757 - 1553771 + g 76 -7.1 -4.17556 | opp_overlap 1553745 1553757 TTACTTTTCTGAATA GCCTC AGAAA GAGGC TTTATTGGAAATGTA PMT9312_1667 1556872 - 1553903 - | phosphoenolpyruvate carboxylase TERM 1159 1554087 - 1554077 - G 79 -6.8 -4.64657 | opp_overlap 1554071 1554077 TGAAACCTGCAAAAA TCCC AAT GGGA TAATTGTCTTATTTC PMT9312_1668 1558044 - 1556926 - | hypothetical protein PMT9312_1669 1559565 - 1558045 - | anthranilate synthase, component I TERM 1160 1559036 - 1559007 - G 93 -10.9 -4.05033 | opp_overlap 1559007 TTGAGTTTAGATAAA CTTCTTCAACAGA AGAC TCTTTTGAAGAAG TTATATCTGCATAAA TERM 1161 1559007 - 1559036 + g 89 -10.9 -3.60525 | opp_overlap 1559007 TTGAGTTTAGATAAA CTTCTTCAACAGA AGAC TCTTTTGAAGAAG TTATATCTGCATAAA PMT9312_1670 1560047 - 1559625 - | photosystem I protein PsaD PMT9312_1671 1561523 - 1560159 - | signal transduction histidine kinase TERM 1162 1561166 - 1561156 - G 80 -5.4 -5.19212 | opp_overlap 1561156 ATTATCATTAAAAAA GGTT CAT AACC ATCTTCTTGACTAAG PMT9312_1672 1562791 - 1561523 - | rod shape determining protein PMT9312_1673 1563865 - 1562795 - | MRP protein-like PMT9312_1674 1564023 - 1565051 + | coproporphyrinogen III oxidase PMT9312_1675 1565637 - 1565080 - | hypothetical protein PMT9312_1676 1565795 - 1566430 + | putative ribonuclease D PMT9312_1677 1566700 - 1566434 - | hypothetical protein PMT9312_1678 1568141 - 1566729 - | hypothetical protein TERM 1163 1567043 - 1567023 - G 73 -8.4 -3.54475 | overlap 1567028 TCCTGCATTAGACAA GCCAATAT CTGCC ATATTGGC CCATAAATTGAATTT TERM 1164 1567374 - 1567363 - G 70 -4.4 -4.78572 | TTTGAATTAACAAAA TCCA TCAT TGGA TTGCCAAAATATGTT TERM 1165 1567637 - 1567653 + g 71 -6.6 -4.00132 | GTAGAAAATCTCCAA CTGCAA TAATT TTGCAG TTATGTTTTGACTTT PMT9312_1679 1569217 - 1569050 - | hypothetical protein PMT9312_1680 1569848 - 1569204 - | carboxylase domain-containing protein PMT9312_1681 1571024 - 1569981 - | phosphoribosylaminoimidazole synthetase TERM 1166 1571781 - 1571767 - g 71 -2.9 -5.14626 | AGTAGCAAAAGAAAA TTTTC AACAA GAAAA AAAGATCAATTTAAA PMT9312_1682 1571123 - 1572655 + | bifunctional pantoate ligase/cytidylate kinase PMT9312_1683 1573131 - 1572658 - | protein tyrosine phosphatase PMT9312_1684 1573925 - 1573164 - | phycoerythrobilin:ferredoxin oxidoreductase TERM 1167 1573713 - 1573723 + g 81 -4 -5.66684 | GCATACTGCTCTTGC GAAT TGA ATTC TTTTTTTATGAGTTA PMT9312_1685 1574636 - 1573926 - | dihydrobiliverdin:ferredoxin oxidoreductase TERM 1168 1574234 - 1574267 + g 87 -5.5 -5.52023 | opp_overlap 1574236 TTTTTGAATCGTAGA TATTCTTCATTTTAT TATT ATCAAATGCAGAATA TTTTTTCTTAATCAT PMT9312_1686 1575352 - 1574642 - | Heme oxygenase PMT9312_1687 1575841 - 1575410 - | hypothetical protein TERM 1169 1576745 - 1576732 - g 77 -3.9 -5.48825 | GAGCATGCAAAAAAA TTATC AGGA GATAA AAGGCATGTGACTCT PMT9312_1688 1576054 - 1577478 + | isocitrate dehydrogenase PMT9312_1689 1578830 - 1577481 - | hypothetical protein TERM 1170 1578526 - 1578552 + g 87 -10.3 -3.57651 | opp_overlap 1578526 AAAGGACCTAAGCAA CTATTTAGGGC ACTTG GCTCTAAATAG TTATGTCCTCTAAGC TERM 1171 1578552 - 1578526 - G 73 -8.1 -3.39432 | opp_overlap 1578526 AAAGGACCTAAGCAA CTATTTAGGGC ACTTG GCTCTAAATAG TTATGTCCTCTAAGC TERM 1172 1578723 - 1578711 - G 84 -3.5 -5.80951 | AGCCAAAATAAAAAA TAAAT TAG ATTTA GATTCAAAACCTTTA PMT9312_1690 1579698 - 1578844 - | hypothetical protein PMT9312_1691 1580607 - 1579708 - | hypothetical protein TERM 1173 1580285 - 1580301 + g 95 -5.1 -6.14618 | CCACCTAATGAATTT CCAACAA TAA TTGTAGG TTTTTTTATTTTCTC PMT9312_1692 1582018 - 1580651 - | CPA2 family Na+/H+ antiporter TERM 1174 1581219 - 1581229 + g 74 -6.8 -4.29738 | opp_overlap 1581219 GATGCCACCACTACA GCTC CAG GAGC TTTTAATCGATCTAA TERM 1175 1582062 - 1582036 - H 100 -6.8 -5.89947 | opp_overlap 1582040 GAAATGCAAAAAAAA TAAACTATCT AACTGGA AGATAGTTTA TTGAGGGCCCACTTT TERM 1176 1583851 - 1583867 + G 80 -7.3 -4.56883 | TCAAAAACGGGCATC CTTGTTG ATC CAGCAAG TTTATTTGATGTTCA PMT9312_1693 1582171 - 1584717 + | phosphorylase PMT9312_1694 1585165 - 1584710 - | hypothetical protein TERM 1177 1585142 - 1585128 - G 72 -8.6 -3.04398 | opp_overlap 1585117, overlap 1585127 TGCTCTTTGTAAAAT CTCTGA CAA TCAGAG CATTGACAAGGTTCT PMT9312_1695 1585529 - 1585197 - | hypothetical protein TERM 1178 1585639 - 1585653 + H 75 -8.6 -3.34088 | opp_overlap 1585632 CGAACCCACGACCTA CGGTTT AGG AAACCG TTGCTCTATCCTGCT TERM 1179 1585747 - 1585772 + H 100 -10.7 -5.00884 | opp_overlap 1585747 GGCAATCGCAAAAAA GTTTTATTTTG TTTC CAAAATAAAAC TTTTTTGAGGAAAGT TERM 1180 1585772 - 1585747 - H 100 -10.7 -5.09426 | opp_overlap 1585747 GGCAATCGCAAAAAA GTTTTATTTTG TTTC CAAAATAAAAC TTTTTTGAGGAAAGT TERM 1181 1586206 - 1586190 - g 79 -8.1 -4.00532 | opp_overlap 1586203 TCTTTAAATATTAAA TCAGAAA GAT TTTCTGA GATAATTAGAAAACA PMT9312_1696 1586121 - 1586870 + | RNAse III PMT9312_1697 1587059 - 1586874 - | hypothetical protein TERM 1182 1587393 - 1587383 - g 84 -5.4 -5.48054 | opp_overlap 1587390, overlap 1587390 ACCAAAATTAAAAAA GGAA GAA TTCC ACTTGTTGGAACTTA rimM 1587084 - 1587623 + | 16S rRNA-processing protein PMT9312_1699 1589551 - 1587656 - | D-fructose-6-phosphate amidotransferase TERM 1183 1588539 - 1588558 + g 72 -7.2 -3.84406 | opp_overlap 1588539 1588537 CTTGCATAAAAAACA TTTGTAGG AATA CCTGCAAA TTGTTCTAATAAAAA PMT9312_1700 1589877 - 1589632 - | photosystem I subunit VII acpP 1590011 - 1590250 + | acyl carrier protein TERM 1184 1590704 - 1590684 - g 71 -7.6 -3.39018 | opp_overlap 1590684, overlap 1590682 TGATGATTCCAAATA TGGCAACT GGACT AGCTGCCA TTGCTTTGGGTGCAA TERM 1185 1591302 - 1591325 + G 78 -6.8 -4.42062 | overlap 1591298 TAGGAGGTTCAGGAG GTATAGAAGC TGTT GCTTGTATAC TTTCTTTGACACATA PMT9312_1702 1590257 - 1591501 + | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 1186 1593300 - 1593321 + G 71 -6.7 -4.07568 | gap 1, opp_overlap 1593293 AAAAAAACTAGAGTT GTCTCTATGC CAT GCATAGA-AC TTTTCGAAGAACAAG PMT9312_1703 1591545 - 1593551 + | transketolase TERM 1187 1593571 - 1593589 + T 72 -9 -2.55706 | opp_overlap 1593570 1593575, overlap 1593570 1593570 TATTGATAATTACAC TGAAGAAT TAC ATTCTTCA AGTTTATCTTTTAGT PMT9312_1704 1594935 - 1593565 - | thiamine biosynthesis protein ThiC TERM 1188 1593891 - 1593909 + g 83 -8.2 -4.32583 | CGCGTACATCTTCTG CATTTGGG AGA CCTAAATG TTCTTTTGGTGTTAC TERM 1189 1595117 - 1595139 + r 100 -8 -5.61596 | opp_overlap 1595117 1595122 CACATATTGCGTAAA TTAAATAAAA TAA TTTTATTTAA TTTTTTTATAAGACT TERM 1190 1595139 - 1595117 - R 74 -8 -3.57119 | opp_overlap 1595117, overlap 1595122 CACATATTGCGTAAA TTAAATAAAA TAA TTTTATTTAA TTTTTTTATAAGACT PMT9312_1705 1595347 - 1595132 - | hypothetical protein PMT9312_1706 1596528 - 1595344 - | peptidase M20D, amidohydrolase PMT9312_1707 1597320 - 1596532 - | TPR repeat-containing protein ruvB 1598365 - 1597307 - | Holliday junction DNA helicase B TERM 1191 1598445 - 1598429 - g 72 -3.7 -5.15117 | TAAAATGGCAAAAAA TTCAAAC AAA GTTAGAA AAAATACTAATAAAG smpB 1598418 - 1598912 + | SsrA-binding protein PMT9312_1710 1599185 - 1598937 - | hypothetical protein lysS 1600753 - 1599215 - | lysyl-tRNA synthetase PMT9312_1712 1601550 - 1600804 - | two component transcriptional regulator PMT9312_1713 1602250 - 1601732 - | hypothetical protein PMT9312_1714 1602999 - 1602247 - | rod shape-determining protein MreC PMT9312_1715 1604056 - 1603004 - | cell shape determining protein MreB PMT9312_1716 1604163 - 1604564 + | single-strand DNA-binding protein PMT9312_1717 1605220 - 1604561 - | DedA family alkaline phosphatase-like protein PMT9312_1718 1606641 - 1605223 - | S-adenosyl-L-homocysteine hydrolase TERM 1192 1605648 - 1605658 + g 77 -4 -5.50774 | TGGCCTCGTCTTTCA TCTT GAC AAGA TTTTTGTTTGTTATA PMT9312_1719 1606693 - 1607130 + | hypothetical protein PMT9312_1720 1608086 - 1607088 - | putative carbohydrate kinase TERM 1193 1608326 - 1608338 + G 74 -6.3 -4.44915 | opp_overlap 1608321 1608324 1608326 GAGACATAATCAAGA TTTCC TTG GGAAA TTTTCTAACTGCTTC PMT9312_1721 1608177 - 1609091 + | alpha/beta fold family hydrolase PMT9312_1722 1610110 - 1609076 - | type II alternative sigma-70 family RNA polymerase sigma factor PMT9312_1723 1611585 - 1610179 - | Mg2+ transporter PMT9312_1724 1611959 - 1611630 - | hypothetical protein PMT9312_1725 1612324 - 1611956 - | CRCB protein-like PMT9312_1726 1612657 - 1612328 - | hypothetical protein gyrB 1614621 - 1612654 - | DNA gyrase subunit B TERM 1194 1613413 - 1613428 + g 74 -9 -3.13908 | TTCTCTAGCCCTTCT TGCAGC TTCT GCTGCA TTGAATGATTGAATT TERM 1195 1614098 - 1614111 + g 80 -5.3 -5.2422 | AAACAAATAGTGGTT CCTTT TTTA AAAGG TTTTTTAGTCTGCTT TERM 1196 1614659 - 1614643 - H 75 -9.5 -2.65862 | opp_overlap 1614643, overlap 1614642 1614641 TAAAAAAAAAACATT GGTCATT TAA AATGACC TTTCATTAAACTTAC TERM 1197 1614643 - 1614659 + H 86 -9.5 -3.93369 | opp_overlap 1614642 1614641 1614643 TAAAAAAAAAACATT GGTCATT TAA AATGACC TTTCATTAAACTTAC PMT9312_1728 1614761 - 1615660 + | tRNA delta-2-isopentenylpyrophosphate (IPP) transferase infC 1615716 - 1616288 + | translation initiation factor IF-3 PMT9312_1730 1616367 - 1617353 + | GntR family transcriptional regulator PMT9312_1731 1617357 - 1618094 + | Serine acetyltransferase secA 1620934 - 1618103 - | preprotein translocase subunit SecA TERM 1198 1618864 - 1618848 - G 74 -6.7 -4.19974 | AAAATCCTTAATAAA TTATCTT CTA AAGATAA AAAGAATCTTGTACT TERM 1199 1620725 - 1620754 + g 74 -2.9 -5.39905 | gap 1, opp_overlap 1620726, overlap 1620727 TCTAACAATCGCAAA GG-CTTTTGGAAGA GAT TCATCCAAGAGTTC TTTTTGTTGTTTAAT TERM 1200 1620727 - 1620751 + g 87 -7.9 -4.74161 | opp_overlap 1620726, overlap 1620725 TAACAATCGCAAAGG CTTTTGGAAGA GAT TCATCCAAGAG TTCTTTTTGTTGTTT PMT9312_1733 1621108 - 1621563 + | GNAT family acetyltransferase PMT9312_1734 1622016 - 1621585 - | transcription regulator-like TERM 1201 1622092 - 1622108 + r 75 -9.5 -2.62983 | TCGAACTCTCGACAT TCTCCTT GGC AAGGAGA TGCTCTACCACTGAG ribH 1622670 - 1622194 - | riboflavin synthase subunit beta PMT9312_1736 1622917 - 1622720 - | putative photosystem II reaction center protein Z TERM 1202 1623691 - 1623681 - g 72 -2.6 -5.37171 | AATAGCAAAGAAAAA TAAT TGG ATTA CTGCTATTTACTTAT TERM 1203 1624623 - 1624599 - g 71 -7.9 -3.45909 | overlap 1624597 TCAACTAATAGAACA TCCTCCTCTTA ATA TAAGTGAAGGA GGCATGATCCACGAT TERM 1204 1624899 - 1624885 - g 80 -5.8 -4.94262 | overlap 1624893 GATATTAAAAATAAA GAAAAT AAG ATTTTC CAAATCAAAAGTCGA PMT9312_1737 1623061 - 1625802 + | DNA mismatch repair protein PMT9312_1738 1626457 - 1625834 - | precorrin-8X methylmutase TERM 1205 1627261 - 1627239 - g 87 -10.6 -3.67102 | opp_overlap 1627239 TTACAGAAAGGAGAA CCTGCTTTGA GAC TCAATGCAGG TTTAATTAGTCAAAT TERM 1206 1627239 - 1627261 + G 89 -10.6 -3.95852 | opp_overlap 1627239 TTACAGAAAGGAGAA CCTGCTTTGA GAC TCAATGCAGG TTTAATTAGTCAAAT PMT9312_1739 1626516 - 1627517 + | DNA polymerase III subunit delta TERM 1207 1628067 - 1628053 - g 81 -10 -3.15861 | CAGTAGCTTTATCAA CAGCTC TAG GAGCTG AGACTTGCGAAATTT PMT9312_1740 1627557 - 1629317 + | aspartate kinase PMT9312_1741 1631364 - 1629325 - | excinuclease ABC subunit B PMT9312_1742 1632170 - 1631394 - | hypothetical protein TERM 1208 1632198 - 1632223 + H 74 -4.9 -5.02476 | gap 1, overlap 1632201 TTTATTACCTGATTG TGACATTGTTTT AGT AAAACAGTG-CA TTTTTTAAAAAATAT PMT9312_1743 1632256 - 1633266 + | hypothetical protein PMT9312_1744 1635245 - 1633263 - | hypothetical protein PMT9312_1745 1636228 - 1635326 - | dihydrodipicolinate synthase PMT9312_1746 1637256 - 1636225 - | aspartate semialdehyde dehydrogenase TERM 1209 1636980 - 1636992 + g 76 -3.4 -5.44721 | opp_overlap 1636980 CATTTTGATCGATAA TGGT AGGCA ACCA TTTTTTTGAAATACT TERM 1210 1638713 - 1638703 - g 74 -5.4 -4.76171 | GAAAAAACTACAAAA GCTT CTC AAGC TTCCAAAACAACAAA TERM 1211 1638776 - 1638760 - g 71 -2.9 -5.18715 | ACAAAAACAACAAAA GCCACAA AAA CTGCGAC AAAAACAACAAAAGC tig 1637380 - 1638825 + | trigger factor PMT9312_1748 1638876 - 1639535 + | ATP-dependent Clp protease proteolytic subunit ClpP TERM 1212 1640917 - 1640902 - g 72 -2.6 -5.40072 | GCCTTCTGAAAAAAA TGTAAA AGAA TTCACA ATTACAAAAAAAATG clpX 1639640 - 1641007 + | ATP-dependent protease ATP-binding subunit TERM 1213 1642587 - 1642574 - g 74 -5.3 -4.75356 | AAATACAGTTAAAAA GATCT TTGG AGATC AAATAATACTTAATT PMT9312_1750 1641066 - 1642805 + | DNA polymerase III, tau subunit PMT9312_1751 1644108 - 1642807 - | glycosyl transferase family protein TERM 1214 1643450 - 1643428 - G 77 -10 -2.57092 | opp_overlap 1643431, overlap 1643431 AACTCCAGCAACTGA CAATCTTCCA TAT TGAAAGATTG CGTCCATAGCCATCT TERM 1215 1644139 - 1644155 + r 100 -5.2 -6.07969 | ATTATTTAATTTTCC TTGAGA CAATA TCTCAA TTTTTTTTAGTTTTA PMT9312_1752 1645674 - 1644121 - | putative amidase enhancer TERM 1216 1645336 - 1645366 + g 95 -8.5 -5.29782 | opp_overlap 1645335 1645337 1645344, overlap 1645337 ATAGCTAGCAAAAGG ACCAAAAACAATT CTTTC AATTGTTTTTGGA TTTTTTATGGGTATA TERM 1217 1645337 - 1645365 + g 100 -12 -3.76785 | opp_overlap 1645335 1645337 1645344, overlap 1645336 TAGCTAGCAAAAGGA CCAAAAACAATT CTTTC AATTGTTTTTGG ATTTTTTATGGGTAT TERM 1218 1645365 - 1645337 - G 89 -12 -3.14218 | opp_overlap 1645337 1645336, overlap 1645335 1645344 TAGCTAGCAAAAGGA CCAAAAACAATT CTTTC AATTGTTTTTGG ATTTTTTATGGGTAT rpmI 1645766 - 1645963 + | 50S ribosomal protein L35 rplT 1645992 - 1646339 + | 50S ribosomal protein L20 PMT9312_1755 1646376 - 1646933 + | TPR repeat-containing protein thiG 1646936 - 1647730 + | thiazole synthase TERM 1219 1648215 - 1648229 + G 82 -8.6 -4.07885 | AAGAGCAGCGCCTTA CTCGAT GAA ATCGAG TTTTACGAAAAGATA PMT9312_1757 1647901 - 1649094 + | sulfolipid (UDP-sulfoquinovose) biosynthesis protein PMT9312_1758 1649122 - 1650255 + | SqdX PMT9312_1759 1650516 - 1650268 - | hypothetical protein TERM 1220 1650356 - 1650366 + g 70 -4 -5.00616 | overlap 1650362 TTTTCAGGCCTTTTT TTCT TTG AGAA TTTTTTACCAAAAGG TERM 1221 1650587 - 1650577 - R 79 -4 -5.63857 | AAAAATCTAAAAAAA TTCT ATA AGAA AATATTAAATTTTTA PMT9312_1760 1653555 - 1650646 - | glycine dehydrogenase TERM 1222 1651813 - 1651837 + g 72 -7.1 -3.90112 | opp_overlap 1651819 TATTGCCAATAAGCC TGCAAACTCTC CTT GAGAGCCTGCA TTTGGTTGAAAAGAA TERM 1223 1651831 - 1651819 - G 73 -7.7 -3.59247 | opp_overlap 1651813 CAATAAGCCTGCAAA CTCTC CTT GAGAG CCTGCATTTGGTTGA TERM 1224 1652350 - 1652360 + g 70 -4 -5.03715 | ACCATTGTTTAAAGC TTCA TTA TGAA TTTTTTGGGAATGCT PMT9312_1761 1653988 - 1653599 - | glycine cleavage system H protein PMT9312_1762 1655283 - 1653991 - | cystathionine beta-lyase family aluminum resistance protein PMT9312_1763 1656000 - 1655287 - | hypothetical protein TERM 1225 1656219 - 1656187 - g 72 -2.7 -5.47218 | overlap 1656189 CGCCATTCAAAAAAA TATCCTCCAAGACTT CAT AAAACTTGGGGAACA ATAGTTTTCATGGTT PMT9312_1764 1656076 - 1657014 + | Fatty acid desaturase, type 1 TERM 1226 1657458 - 1657443 - g 79 -4.8 -5.27023 | ACTGCAAAAATAAAA TTACAT CCAG ATGTAA ATGCAGAAGTAAATA rplI 1657035 - 1657490 + | 50S ribosomal protein L9 TERM 1227 1658075 - 1658065 - g 76 -5.4 -5.11063 | opp_overlap 1658065 1658063, overlap 1658059 ATCAGTCAAGAAAAA CCTT CAA AAGG TCTTACTCAAGCAGC PMT9312_1766 1657549 - 1658931 + | DnaB replicative helicase TERM 1228 1660418 - 1660408 - g 71 -6.8 -4.04157 | overlap 1660409 TCAAGAAAAAATGAA CCTC CTC GAGG AAGAAAAATTAAGAT TERM 1229 1660788 - 1660775 - g 74 -5.3 -4.79752 | TTGAATAAGATAAAA CCAAA AAAT TTTGG TGATGCTTCAAAAAT PMT9312_1767 1658945 - 1660933 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA PMT9312_1768 1661035 - 1661535 + | hypothetical protein PMT9312_1769 1662078 - 1661515 - | hypothetical protein PMT9312_1770 1662689 - 1662162 - | hypothetical protein PMT9312_1771 1662775 - 1663194 + | hypothetical protein PMT9312_1772 1663219 - 1664532 + | ATP-dependent DNA ligase PMT9312_1773 1664650 - 1664802 + | hypothetical protein PMT9312_1774 1665403 - 1664807 - | hypothetical protein TERM 1230 1664992 - 1664970 - G 95 -5.6 -6.13503 | overlap 1664971 GAGCAATAAAAAAAA GTTCCTGGAA TTA TTCCAAGAAG ACCAAGAGCGAAATC TERM 1231 1664991 - 1664971 - G 88 -9.1 -4.25661 | overlap 1664970 AGCAATAAAAAAAAG TTCCTGGAA TTA TTCCAAGAA GACCAAGAGCGAAAT TERM 1232 1665146 - 1665164 + g 90 -9 -4.56597 | opp_overlap 1665145 1665155, overlap 1665155 TAATTTTGGATAACG GCTAAAAA GGT TTTTTAGC TTTTTGGCAAAAAAA TERM 1233 1665155 - 1665180 + g 71 -5.5 -4.72272 | opp_overlap 1665145 1665155, overlap 1665146 ATAACGGCTAAAAAG GTTTTTTAGCT TTTT GGCAAAAAAAC TTTTTGATACAAAAA TERM 1234 1665196 - 1665180 - G 81 -4.5 -5.40072 | overlap 1665181 TTTTTGGCAAAAAAA CTTTTTG ATA CAAAAAA TGAAACTGATGCTCC valS 1668162 - 1665406 - | valyl-tRNA synthetase TERM 1235 1666496 - 1666482 - G 79 -7.2 -4.41047 | ATTTCTCAATTAAAA GTATTG GGT CAATAC CATTACCTGAACTTT PMT9312_1776 1668645 - 1668259 - | hypothetical protein TERM 1236 1669253 - 1669241 - g 72 -4.9 -4.81685 | ATCAATTAGTAAAAA TTTGA AAG TCAAA AATTTACCTCCAACG mazG 1668786 - 1669625 + | nucleoside triphosphate pyrophosphohydrolase PMT9312_1778 1669633 - 1670484 + | spermidine synthase PMT9312_1779 1670486 - 1671367 + | arginase family TERM 1237 1672006 - 1671992 - g 75 -2.8 -5.63517 | CTCCTAAAGAAAAAA TCTTCG TTT CCAAGA CAGGATATACAGGGG PMT9312_1780 1671418 - 1672530 + | glycine cleavage system aminomethyltransferase T TERM 1238 1673120 - 1673109 - g 72 -7.2 -3.83868 | opp_overlap 1673109 TACTAACAAAATCAA CGCC AGAA GGCG CTCGCGATTTTCTTA aspS 1672586 - 1674382 + | aspartyl-tRNA synthetase PMT9312_1782 1674458 - 1676068 + | CTP synthetase PMT9312_1783 1676087 - 1676764 + | putative organic radical activating protein PMT9312_1784 1676771 - 1677445 + | ExsB PMT9312_1785 1677442 - 1678755 + | putative p-aminobenzoate synthetase TERM 1239 1679278 - 1679268 - g 77 -4 -5.46657 | opp_overlap 1679268 GAGGCTAATAAAAAA TCAT TCG ATGA TTCTATCCTTTTGAA PMT9312_1786 1678752 - 1679579 + | aminotransferase class-IV PMT9312_1787 1680355 - 1679552 - | uroporphyrinogen-III C-methyltransferase TERM 1240 1680308 - 1680291 - G 70 -7.1 -3.727 | TTTATTAGACGTAAA GCTTTTA AAGT TAAAAGC TCAGGGTCACCAGGA TERM 1241 1680622 - 1680653 + G 71 -2.3 -5.49569 | TTTTATAGGAATTAT GAGTGATAGATAT GGAAGA AGACCTGTCACTC TTTTTTGTATTACTG PMT9312_1788 1680413 - 1681681 + | major facilitator superfamily multidrug-efflux transporter TERM 1242 1682983 - 1682968 - g 77 -7.6 -4.1466 | ATTCAATGGGCAAAA CAGCTT GAAC AAGCTG GAATTCATGTTGTAT TERM 1243 1683233 - 1683258 + G 89 -9.1 -4.41609 | opp_overlap 1683229 1683227 1683216 ATCAAAAGTTATTAG TTTCTCCCTCA TCGA TGAGAGAGAAA TTTATATTTCTGATA TERM 1244 1683485 - 1683502 + G 100 -7.1 -5.50313 | overlap 1683497 GCATTATTGGCCATT TTCTTGA ACAC TCAAGAA TTTTTTGGTTTTGTA PMT9312_1789 1681681 - 1683759 + | polyphosphate kinase PMT9312_1790 1683968 - 1684987 + | type II alternative sigma-70 family RNA polymerase sigma factor TERM 1245 1685389 - 1685407 + G 87 -4.6 -5.75342 | opp_overlap 1685388, overlap 1685391 1685406 TTAATAGGAAAAAGC TTTAACTC AAA GAGTTGGA TTTTTTTTAAACAAA TERM 1246 1685406 - 1685429 + G 85 -8.4 -4.43208 | opp_overlap 1685419, overlap 1685389 TAACTCAAAGAGTTG GATTTTTTTT AAAC AAAAAAAATC TTTATTTGGCACTAT PMT9312_1791 1684993 - 1685634 + | hypothetical protein PMT9312_1792 1686694 - 1685627 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1247 1685722 - 1685734 + g 75 -4.9 -5.00138 | CAAACTGAAGATCCT CTTTT TTT AAAAG TTTTTGATTTCCCTC TERM 1248 1689178 - 1689200 + G 80 -7.1 -4.56775 | gap 1, opp_overlap 1689178 1689176 GAAATTTTGACAATA GACTTG-GCA AGAA TGCACAAGTC TTTTTAGGCAGCGCT PMT9312_1793 1686792 - 1689365 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase PMT9312_1794 1689375 - 1690733 + | putative chloride channel TERM 1249 1690768 - 1690755 - T 82 -6.7 -4.86621 | opp_overlap 1690755 ATCTTCAATCAAAAA CAGCA GTTT TGCTG TTATAAACAAATACT PMT9312_1795 1691598 - 1690744 - | formyltetrahydrofolate deformylase TERM 1250 1691547 - 1691528 - G 78 -9.4 -3.29211 | TAATTTGAAATCCAA CTTGTAAG TAAA CTTACAAG GCCAGGACGATCGGG TERM 1251 1691924 - 1691908 - g 71 -5.3 -4.58685 | overlap 1691891 AAATTCTTGCAAAAA TTTAATT ATA AATTAAA TATCGAAAAACCATT TERM 1252 1692178 - 1692166 - g 85 -4.9 -5.63645 | TTAAAACATAAAAAA GTAAA TTA TTTAC AAAGAGAAATAATAA PMT9312_1796 1691647 - 1692729 + | D-amino acid oxidase PMT9312_1797 1694663 - 1692726 - | molecular chaperone DnaK TERM 1253 1692876 - 1692896 + g 76 -3.4 -5.32565 | gap 1 AACTGCATAGAGTTC TTGC-TGAA GCTC TTCAAGCAA TTTTTTCATTGATTC TERM 1254 1693041 - 1693057 + g 81 -3.8 -5.65678 | opp_overlap 1693028, overlap 1693028 AACAAGTGTTTCAGC TTGATT CTTTA AATCAA TTTTTTCTCTTTTAT TERM 1255 1693571 - 1693585 + g 70 -4.3 -4.79949 | GATTAACAGTTTGAT TTGGT TCTTT ACCAA TTATTTTTTTAACCA TERM 1256 1693779 - 1693765 - G 70 -7.2 -3.6715 | CGAGTTAAGTTCAAA TCCAAA TGT TTTGGA CCTTCAGGGGTCGCT PMT9312_1798 1694751 - 1695611 + | shikimate 5-dehydrogenase rpsF 1695716 - 1696174 + | 30S ribosomal protein S6 PMT9312_1800 1697395 - 1696181 - | argininosuccinate synthase TERM 1257 1696434 - 1696422 - G 74 -7.7 -3.77014 | ATAAAAGCATCTAAA CTCTC CTT GAGAG GACCAAACCAAAAAC TERM 1258 1696949 - 1696962 + g 70 -8.1 -3.10981 | overlap 1696947 CCTACTCATATTCCA CTCCC TTGC GGGAG TAATTATTTTCAAAT TERM 1259 1697938 - 1697921 - g 89 -8.5 -4.57533 | opp_overlap 1697932, overlap 1697932 AAGAAGATTATAAAA CTGAAGA AGAC TCTTCAG AAGATGATTGGGAAG PMT9312_1801 1697647 - 1697958 + | hypothetical protein TERM 1260 1698370 - 1698359 - g 71 -3 -5.3104 | GGATTAAAAACAAAA GAAA AATT TTTC TTACAAAGTATCATT PMT9312_1802 1697942 - 1699018 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 1261 1699079 - 1699100 + GT 91 -11.7 -3.5393 | overlap 1699068 GAGTGACTGCTCGAG TCTTGATGC AATG GCATCAAGA TTTGAAGAAACTGCT PMT9312_1803 1700617 - 1699208 - | sucrose-phosphate synthase PMT9312_1816 1699029 - 1699274 + | hypothetical protein uvrA 1703723 - 1700820 - | excinuclease ABC subunit A TERM 1262 1702954 - 1702970 + g 74 -2.9 -5.40072 | TCTCTCTCTAAGTTA GGAGGTA AGT TTTCTCC TTTTTTTGGAACAAC PMT9312_1805 1705460 - 1703781 - | DNA repair protein RecN, ABC transporter TERM 1263 1704902 - 1704913 + g 74 -3 -5.32565 | overlap 1704897 TTTCATCTTGCTTCC TAGA AGAT TCTA TTTTTTCATTCATTA PMT9312_1806 1705529 - 1707385 + | putative protein kinase:ABC1 family TERM 1264 1707402 - 1707436 + G 74 -6.1 -4.46617 | opp_overlap 1707403, overlap 1707403 1707409 ATGAACTTTAATAAA ATTATAATAATAAAA TTATT TTTTATTATTATAAA TTTTCAATTTCTTTT TERM 1265 1707403 - 1707435 + G 78 -9.6 -3.2553 | opp_overlap 1707403, overlap 1707402 1707409 TGAACTTTAATAAAA TTATAATAATAAAA TTATT TTTTATTATTATAA ATTTTCAATTTCTTT TERM 1266 1707435 - 1707403 - g 93 -9.6 -4.68103 | opp_overlap 1707403 1707402 1707409 TGAACTTTAATAAAA TTATAATAATAAAA TTATT TTTTATTATTATAA ATTTTCAATTTCTTT TERM 1267 1707409 - 1707419 + G 75 -2.6 -5.68489 | opp_overlap 1707403, overlap 1707403 1707402 TTAATAAAATTATAA TAAT AAA ATTA TTTTTTATTATTATA PMT9312_1807 1707387 - 1707959 + | hypothetical protein TERM 1268 1708341 - 1708317 - g 77 -10.2 -2.62396 | TATGCTTCTAGAGGA GGATTAAAAC CTTAT GTTTTAATCC CAGAAGGATTTGTTG TERM 1269 1708809 - 1708791 - g 81 -3.2 -5.88061 | AAAAAAGTAAAAAAA GAAAGT AAAGGAG ACTTTC AATCAGTTACGGATG PMT9312_1808 1707966 - 1709069 + | threonine synthase